isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	perc_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	polyA_motif	polyA_dist
PB.8563.27	chr3	+	4990	32	novel_not_in_catalog	EIF4G1	novel	5516	33	NA	NA	-15	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	792322.2053743775	NA	6	1	TRUE	NA	NA	NA	C	coding	1570	4713	134	4846	10.0	2	True	AATAAA	-13
PB.616.7	chr1	+	3473	6	full-splice_match	CTTNBP2NL	ENST00000271277.10	5897	6	69	2355	69	-2355	multi-exon	FALSE	canonical	1	82181	junction_1	33310.0667822807	NA	1	NA	TRUE	NA	NA	NA	C	coding	639	1920	157	2076	65.0	0	True	NA	NA
PB.11283.1	chr8	-	3677	3	novel_in_catalog	KLF10	novel	3097	4	NA	NA	177	0	intron_retention	FALSE	canonical	1	384119	junction_2	211820.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	402	1209	125	1333	25.0	-3	True	AATAAA	-21
PB.11762.9	chr9	+	2811	19	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	1	4	any annotated donor/acceptor	FALSE	canonical	1	1381	junction_1	1101137.7221665322	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	372	2567	5.0	0	True	AATAAA	-22
PB.11762.8	chr9	+	2484	18	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	1049949.8848896087	NA	1	1	TRUE	NA	NA	NA	C	coding	694	2085	160	2244	10.0	-1	True	AATAAA	-18
PB.356.5	chr1	+	2330	12	novel_in_catalog	AL451062.3	novel	4037	26	NA	NA	57422	143	no_combination_of_known_junctions	FALSE	canonical	1	1265	junction_11	55981.086418790575	NA	0	NA	TRUE	NA	NA	NA	B	coding	400	1203	154	1356	5.0	-92	False	AATAAA	-11
PB.10565.4	chr7	+	3460	2	novel_in_catalog	ZNF273	novel	2978	8	NA	NA	5	-15	no_combination_of_known_junctions	FALSE	canonical	1	2889	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-52	False	AATAAA	-16
PB.6488.2	chr2	-	11322	80	full-splice_match	USP34	ENST00000398571.6	11357	80	34	1	34	-1	multi-exon	FALSE	canonical	1	146864	junction_79	98562.19486265295	NA	2	NA	TRUE	NA	NA	NA	C	coding	3546	10641	44	10684	20.0	-1	True	ATTAAA	-20
PB.11762.1	chr9	+	2587	18	novel_in_catalog	GSN	novel	3341	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	630779	junction_2	860451.3104667846	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	153	2348	10.0	6	True	AATAAA	-17
PB.11762.3	chr9	+	4120	2	incomplete-splice_match	GSN	ENST00000432226.5	1042	8	98	31585	-5	20341	3prime_fragment	FALSE	canonical	1	717455	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	143	432	2846	3277	75.0	-6	True	NA	NA
PB.11762.2	chr9	+	2826	20	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	-19	0	any annotated donor/acceptor	FALSE	canonical	1	1527	junction_3	1191253.5772823473	NA	2	NA	TRUE	NA	NA	NA	C	coding	755	2268	320	2587	10.0	-20	True	AATAAA	-17
PB.11762.5	chr9	+	3189	1	novel_in_catalog	GSN	novel	3341	25	NA	NA	0	6165	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.11762.4	chr9	+	2774	20	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1180291.9250678972	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	340	2535	10.0	-4	True	AATAAA	-17
PB.11762.7	chr9	+	2634	18	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	20220	junction_2	949412.2168552462	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	199	2394	10.0	-1	True	AATAAA	-18
PB.11762.6	chr9	+	2739	20	novel_in_catalog	GSN	novel	3341	25	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	594	junction_3	1180159.8458037353	NA	3	1	TRUE	NA	NA	NA	C	coding	731	2196	305	2500	10.0	-1	True	AATAAA	-17
PB.5555.7	chr19	-	2711	11	novel_in_catalog	TMEM259	novel	2748	11	NA	NA	-14	0	intron_retention	FALSE	canonical	1	36295	junction_9	633156.1628138828	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	134	2014	5.0	-7	True	AATAAA	-17
PB.12091.4	chrX	-	6021	26	full-splice_match	SMC1A	ENST00000375340.10	9930	26	76	3833	17	2638	multi-exon	FALSE	canonical	1	12619	junction_25	233637.1378347201	NA	20	NA	TRUE	NA	NA	NA	C	coding	1192	3579	322	3900	40.0	1	True	NA	NA
PB.10650.2	chr7	-	3994	12	novel_in_catalog	SLC25A40	novel	4045	12	NA	NA	49	4	combination_of_known_junctions	TRUE	canonical	1	13274	junction_9	66787.56586408571	NA	5	NA	TRUE	NA	NA	NA	C	coding	276	831	479	1309	30.0	-5	True	AATAAA	-22
PB.5555.4	chr19	-	2637	11	novel_in_catalog	TMEM259	novel	2748	11	NA	NA	-7	0	intron_retention	FALSE	canonical	1	377591	junction_4	562439.6031362301	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	127	1938	5.0	0	True	AATAAA	-19
PB.12091.1	chrX	-	9728	25	full-splice_match	SMC1A	ENST00000322213.8	9784	25	54	2	-5	-2	multi-exon	TRUE	canonical	1	370159	junction_24	157711.304417803	NA	1	NA	TRUE	NA	NA	NA	C	coding	1233	3702	75	3776	10.0	-21	True	AATAAA	-12
PB.10650.5	chr7	-	3227	13	novel_in_catalog	SLC25A40	novel	4045	12	NA	NA	-9	-933	combination_of_known_junctions	FALSE	canonical	1	37489	junction_11	69178.72563045786	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	463	1479	15.0	-10	True	AATAAA	-18
PB.12091.3	chrX	-	5599	23	novel_in_catalog	SMC1A	novel	9784	25	NA	NA	15	2662	combination_of_known_junctions	FALSE	canonical	1	23440	junction_22	198241.84139933417	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	155	3454	45.0	-1	True	NA	NA
PB.12091.2	chrX	-	5897	25	full-splice_match	SMC1A	ENST00000322213.8	9784	25	51	3836	-8	2635	multi-exon	FALSE	canonical	1	370159	junction_24	157711.304417803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	78	3779	55.0	-24	True	NA	NA
PB.10650.8	chr7	-	2975	11	novel_in_catalog	SLC25A40	novel	4045	12	NA	NA	20	-940	combination_of_known_junctions	FALSE	canonical	1	8073	junction_3	71655.03644155098	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	328	987	30.0	27	False	AATAAA	-11
PB.10650.9	chr7	-	2900	12	full-splice_match	SLC25A40	ENST00000341119.9	4045	12	38	1107	-6	-1107	multi-exon	FALSE	canonical	1	121255	junction_10	47449.18031252572	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	310	1326	15.0	-11	True	ATTAAA	-17
PB.1151.2	chr1	+	4043	6	novel_not_in_catalog	CNIH4	novel	4125	5	NA	NA	0	3	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	436277.9207287942	NA	1	1	TRUE	NA	NA	NA	C	coding	139	420	39	458	10.0	0	True	NA	NA
PB.6014.9	chr19	+	2926	15	full-splice_match	HNRNPUL1	ENST00000595196.5	3043	15	85	32	38	-1	multi-exon	FALSE	canonical	1	204741	junction_1	536417.2485654384	NA	2	NA	TRUE	NA	NA	NA	C	coding	716	2151	323	2473	70.0	-585	False	NA	NA
PB.5945.9	chr19	+	3464	5	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	1	-5	any annotated donor/acceptor	FALSE	canonical	1	21296	junction_2	270121.378473641	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1139	2017	35.0	1	True	ATTAAA	-18
PB.2476.1	chr12	-	1556	2	full-splice_match	GPR19	ENST00000540510.1	1751	2	-63	258	-63	-88	multi-exon	FALSE	canonical	1	32562	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	409	1230	275	1504	50.0	-65	False	ATTAAA	-15
PB.8435.35	chr3	+	2633	4	full-splice_match	ZBTB38	ENST00000504673.5	590	4	-12	-2031	9	0	multi-exon	FALSE	canonical	1	6166	junction_2	36256.24555239491	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2304	330	2633	65.0	2	True	GATAAA	-25
PB.3372.2	chr14	+	2616	11	full-splice_match	NUBPL	ENST00000281081.11	3049	11	13	420	10	-414	multi-exon	FALSE	canonical	1	79443	junction_1	14875.462581042648	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	33	992	70.0	-14	True	NA	NA
PB.3372.3	chr14	+	2108	11	full-splice_match	NUBPL	ENST00000281081.11	3049	11	19	922	16	0	multi-exon	FALSE	canonical	1	79443	junction_1	14875.462581042648	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	27	986	100.0	-8	True	NA	NA
PB.3372.1	chr14	+	3018	11	full-splice_match	NUBPL	ENST00000281081.11	3049	11	0	31	0	-25	multi-exon	FALSE	canonical	1	79443	junction_1	14875.462581042648	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	46	1005	75.0	-27	True	NA	NA
PB.10418.2	chr7	+	4293	11	full-splice_match	HDAC9	ENST00000622668.4	4279	11	-14	0	-7	0	multi-exon	FALSE	canonical	1	40309	junction_1	31566.761443645122	NA	1	1	TRUE	NA	NA	NA	C	coding	549	1650	334	1983	40.0	-17	True	AATAAA	-10
PB.10418.3	chr7	+	4125	11	novel_in_catalog	HDAC9	novel	2524	13	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	21792	junction_1	35219.53182667254	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	158	1807	15.0	-10	True	AATAAA	-18
PB.10418.1	chr7	+	4442	12	novel_in_catalog	HDAC9	novel	2524	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	40309	junction_1	29859.7999121459	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	351	2132	40.0	9	True	AATAAA	-10
PB.10418.6	chr7	+	4092	10	novel_in_catalog	HDAC9	novel	2524	13	NA	NA	-5	9	combination_of_known_junctions	FALSE	canonical	1	24595	junction_1	36330.3594623927	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	211	1767	25.0	-11	True	AATAAA	-25
PB.10418.7	chr7	+	4312	12	novel_not_in_catalog	HDAC9	novel	2524	13	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	4897	junction_11	44771.621251867364	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	207	1640	40.0	-7	True	AATAAA	-10
PB.10418.4	chr7	+	4248	12	novel_in_catalog	HDAC9	novel	2524	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	21792	junction_1	33296.67424511229	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	157	1938	40.0	-9	True	AATAAA	-10
PB.10418.5	chr7	+	4227	11	full-splice_match	HDAC9	ENST00000456174.6	2307	11	17	-1937	17	0	multi-exon	FALSE	canonical	1	24595	junction_1	34215.61195726302	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	229	1917	40.0	-5	True	AATAAA	-10
PB.11724.12	chr9	+	2682	7	novel_in_catalog	HSDL2	novel	3350	11	NA	NA	-5	-1	no_combination_of_known_junctions	FALSE	canonical	1	545	junction_1	200112.1168853434	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	88	822	30.0	9	True	NA	NA
PB.787.17	chr1	-	3248	14	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-10528	-2662	any annotated donor/acceptor	FALSE	canonical	1	10771	junction_1	559209.2214495616	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	138	1745	15.0	-6	True	ATTAAA	-15
PB.6006.7	chr19	+	2373	18	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	12279	junction_4	214173.9679062626	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	551	2185	25.0	-18	True	AATAAA	-13
PB.6006.6	chr19	+	2269	18	full-splice_match	SHKBP1	ENST00000291842.9	2363	18	25	69	9	32	multi-exon	FALSE	canonical	1	516772	junction_1	146807.41692838067	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	25	2148	15.0	-12	True	AATAAA	-12
PB.6006.5	chr19	+	2650	17	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	516772	junction_1	146684.25526064853	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	36	1562	20.0	-23	True	AATAAA	-14
PB.6006.4	chr19	+	2395	18	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	5591	junction_5	260543.11368945547	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	572	2206	20.0	-25	True	AATAAA	-14
PB.6006.3	chr19	+	1888	17	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	1	-32	combination_of_known_junctions	FALSE	canonical	1	12279	junction_4	219847.36653037227	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1323	565	1887	5.0	-32	True	NA	NA
PB.6006.2	chr19	+	2472	17	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	516772	junction_1	137239.29141147953	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	649	2283	20.0	-32	True	AATAAA	-14
PB.6006.1	chr19	+	2387	18	novel_not_in_catalog	SHKBP1	novel	2363	18	NA	NA	0	0	any annotated donor/acceptor	TRUE	canonical	1	9189	junction_12	217762.07338849604	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	46	2199	25.0	-33	True	AATAAA	-13
PB.1051.36	chr1	+	5053	20	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	3944	junction_3	194855.16671546563	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	897	3329	20.0	25	False	AATAAA	-17
PB.8962.10	chr4	+	3678	11	novel_in_catalog	EXOSC9	novel	1481	12	NA	NA	-3	-29	intron_retention	FALSE	canonical	1	465355	junction_3	98565.28479140108	NA	2	NA	TRUE	NA	NA	NA	C	coding	387	1164	83	1246	60.0	2	True	NA	NA
PB.6006.9	chr19	+	3099	16	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	-1	0	intron_retention	FALSE	canonical	1	516772	junction_1	152800.79116077902	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	1051	2910	20.0	-2	True	AATAAA	-14
PB.6006.8	chr19	+	2021	15	novel_in_catalog	SHKBP1	novel	2363	18	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	22538	junction_9	215554.15858425066	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	31	1833	25.0	-18	True	AATAAA	-13
PB.9508.1	chr5	+	2924	1	full-splice_match	PCDHB5	ENST00000231134.7	3408	1	-12	496	-12	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	781	2346	272	2617	20.0	0	True	AATAAA	-25
PB.9002.28	chr4	-	3568	11	incomplete-splice_match	INPP4B	ENST00000262992.8	3741	24	57307	143376	-186	66455	internal_fragment	FALSE	canonical	1	97877	junction_1	29382.743567611247	NA	0	NA	TRUE	NA	NA	NA	B	coding	275	828	542	1369	10.0	-22	True	AATAAA	-19
PB.9508.2	chr5	+	5740	1	full-splice_match	PCDHB5	ENST00000231134.7	3408	1	-7	-2325	-7	2325	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	795	2388	225	2612	80.0	5	True	AATAAA	-6
PB.3289.1	chr14	-	1983	11	full-splice_match	OSGEP	ENST00000206542.8	2002	11	281	-262	-12	5	multi-exon	TRUE	canonical	1	263655	junction_9	143626.45170162772	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	142	1149	25.0	-13	True	NA	NA
PB.9002.24	chr4	-	4323	14	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-160	-40195	any annotated donor/acceptor	FALSE	canonical	1	2441	junction_1	47634.1803909209	NA	3	NA	TRUE	NA	NA	NA	B	coding	401	1206	516	1721	25.0	4	True	AATAAA	-19
PB.9002.27	chr4	-	3350	14	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-184	-41192	any annotated donor/acceptor	FALSE	canonical	1	2441	junction_1	47634.1803909209	NA	2	NA	TRUE	NA	NA	NA	B	coding	401	1206	540	1745	30.0	-20	True	AATAAA	-24
PB.3289.2	chr14	-	1352	11	full-splice_match	OSGEP	ENST00000206542.8	2002	11	258	392	-35	3	multi-exon	FALSE	canonical	1	263655	junction_9	143626.45170162772	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	165	1172	15.0	6629	False	AATAAA	-23
PB.9002.21	chr4	-	2215	18	novel_in_catalog	INPP4B	novel	8831	27	NA	NA	-174	0	no_combination_of_known_junctions	FALSE	canonical	1	3606	junction_7	41996.41209868564	NA	0	NA	TRUE	NA	NA	NA	B	coding	562	1686	530	2215	70.0	-10	True	TTTAAA	-38
PB.787.18	chr1	-	3175	13	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-6894	-2662	any annotated donor/acceptor	FALSE	canonical	1	1167	junction_12	495645.74267399305	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	251	1672	15.0	-1	True	ATTAAA	-15
PB.9002.23	chr4	-	2641	18	incomplete-splice_match	INPP4B	ENST00000262992.8	3741	24	57309	79777	-184	-21624	internal_fragment	FALSE	canonical	1	71468	junction_7	31747.362607948296	NA	0	NA	TRUE	NA	NA	NA	B	coding	611	1836	540	2375	35.0	-20	True	AATAAA	-21
PB.10131.5	chr6	-	2971	11	novel_not_in_catalog	PREP	novel	2905	15	NA	NA	-40	7086	any annotated donor/acceptor	FALSE	canonical	1	1430	junction_1	140879.4288830346	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	234	1712	85.0	79	False	NA	NA
PB.5156.4	chr17	-	2012	9	full-splice_match	RNFT1	ENST00000305783.12	2101	9	-34	123	8	-1	multi-exon	FALSE	canonical	1	75103	junction_5	60468.10925345276	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	91	1398	15.0	-17	True	AATAAA	-13
PB.5549.2	chr19	+	3122	14	novel_in_catalog	PTBP1	novel	3598	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	35957	junction_1	808096.2132698172	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	143	1726	5.0	0	True	ATTAAA	-18
PB.5549.3	chr19	+	3144	15	full-splice_match	PTBP1	ENST00000356948.10	3598	15	348	106	-2	-1	multi-exon	FALSE	canonical	1	1080248	junction_5	621553.4432767988	NA	63	4	TRUE	NA	NA	NA	C	coding	557	1674	76	1749	5.0	-9062	False	ATTAAA	-17
PB.5549.4	chr19	+	3039	13	novel_in_catalog	PTBP1	novel	3598	15	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	58818	junction_9	896979.5808325718	NA	2	1	TRUE	NA	NA	NA	C	coding	355	1068	83	1150	5.0	1	True	ATTAAA	-17
PB.5549.5	chr19	+	2487	10	novel_not_in_catalog	PTBP1	novel	3598	15	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	857339.3932658795	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	84	1001	0.0	0	True	AATAAA	-15
PB.5549.6	chr19	+	1944	15	full-splice_match	PTBP1	ENST00000356948.10	3598	15	340	1314	-10	-3	multi-exon	TRUE	canonical	1	1080248	junction_5	621553.4432767988	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	84	1757	10.0	0	True	ATTAAA	-38
PB.5156.5	chr17	-	1911	8	full-splice_match	RNFT1	ENST00000482446.5	1893	8	-19	1	8	-1	multi-exon	FALSE	canonical	1	10956	junction_5	74392.73332573194	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	91	828	15.0	-17	True	AATAAA	-13
PB.5549.8	chr19	+	3186	14	novel_not_in_catalog	PTBP1	novel	3598	15	NA	NA	-9	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	774325.1812889044	NA	2	1	TRUE	NA	NA	NA	C	coding	468	1407	288	1694	0.0	1	True	AATAAA	-21
PB.5549.9	chr19	+	2095	6	novel_in_catalog	PTBP1	novel	3598	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	7869	junction_2	939992.060489151	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	154	609	0.0	-3	True	AATAAA	-15
PB.6882.1	chr2	+	2440	2	full-splice_match	ITPRID2	ENST00000480753.1	2526	2	86	0	31	0	multi-exon	FALSE	canonical	1	641209	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	86	261	149	409	30.0	-36	True	AATAAA	-22
PB.6882.7	chr2	+	5035	17	full-splice_match	ITPRID2	ENST00000409001.5	4987	17	-51	3	-21	-3	multi-exon	FALSE	canonical	1	136132	junction_14	165407.5207513533	NA	0	NA	TRUE	NA	NA	NA	C	coding	1237	3714	134	3847	20.0	-21	True	AATAAA	-16
PB.6882.6	chr2	+	4895	18	full-splice_match	ITPRID2	ENST00000431877.6	5150	18	252	3	-56	-3	multi-exon	FALSE	canonical	1	410070	junction_11	123956.29062519212	NA	0	NA	TRUE	NA	NA	NA	C	coding	1106	3321	387	3707	20.0	-8104	False	AATAAA	-16
PB.6882.5	chr2	+	5439	19	novel_not_in_catalog	ITPRID2	novel	2526	2	NA	NA	-82	-4	any annotated donor/acceptor	FALSE	canonical	1	6900	junction_11	240043.53007924277	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2847	317	3163	20.0	3	True	AATAAA	-15
PB.6882.4	chr2	+	4650	18	full-splice_match	ITPRID2	ENST00000431877.6	5150	18	287	213	-21	-213	multi-exon	FALSE	canonical	1	410070	junction_11	123956.29062519212	NA	0	NA	TRUE	NA	NA	NA	C	coding	1106	3321	352	3672	35.0	-8069	False	AATAAA	-18
PB.11937.1	chrY	+	1709	8	novel_not_in_catalog	PLCXD1	novel	5287	8	NA	NA	7	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	180.66182185938186	NA	2	1	TRUE	NA	NA	NA	B	coding	323	972	86	1057	40.0	NA	False	AATAAA	-19
PB.787.19	chr1	-	2499	12	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-6892	-2662	any annotated donor/acceptor	FALSE	canonical	1	35263	junction_8	448141.62685238343	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	220	1920	15.0	1	True	ATTAAA	-15
PB.11165.1	chr8	+	2003	12	full-splice_match	ADHFE1	ENST00000419955.5	1979	12	-30	6	-3	-4	multi-exon	FALSE	canonical	1	5696	junction_1	36618.448666536955	NA	0	NA	TRUE	NA	NA	NA	A	coding	158	477	1076	1552	45.0	-22	True	NA	NA
PB.4992.3	chr17	+	3994	20	novel_in_catalog	ATP6V0A1	novel	3028	21	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	2452	junction_4	114124.94939098919	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	151	2538	20.0	-18	True	AATAAA	-18
PB.4992.2	chr17	+	2593	21	full-splice_match	ATP6V0A1	ENST00000393829.6	3028	21	7	428	7	12	multi-exon	TRUE	canonical	1	220106	junction_5	79285.81190578804	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2433	161	2593	20.0	-28	False	AATAAA	-13
PB.4992.1	chr17	+	4134	21	full-splice_match	ATP6V0A1	ENST00000264649.10	4110	21	-29	5	7	0	multi-exon	FALSE	canonical	1	63901	junction_5	100995.0318943833	NA	3	NA	TRUE	NA	NA	NA	C	coding	838	2517	161	2677	20.0	-28	False	AATAAA	-19
PB.5156.3	chr17	-	3645	8	novel_in_catalog	RNFT1	novel	2101	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	86371	junction_5	53934.94195901622	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	101	796	15.0	-27	True	AATAAA	-13
PB.4992.7	chr17	+	3955	20	full-splice_match	ATP6V0A1	ENST00000537728.5	2774	20	3	-1184	1	0	multi-exon	FALSE	canonical	1	2542	junction_4	114109.03592995723	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	131	2497	20.0	2	True	AATAAA	-20
PB.4992.6	chr17	+	4400	20	novel_not_in_catalog	ATP6V0A1	novel	3028	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	4597	junction_5	107387.12362060418	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2553	134	2686	20.0	-1	True	AATAAA	-20
PB.4992.5	chr17	+	4090	21	full-splice_match	ATP6V0A1	ENST00000393829.6	3028	21	30	-1092	-4	0	multi-exon	FALSE	canonical	1	220106	junction_5	79285.81190578804	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	138	2633	20.0	-5	True	AATAAA	-19
PB.4992.4	chr17	+	3927	20	novel_in_catalog	ATP6V0A1	novel	3028	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	38171	junction_19	107229.27745420931	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	146	2479	20.0	-13	True	AATAAA	-20
PB.2567.1	chr12	-	4853	16	full-splice_match	RPAP3	ENST00000380650.4	2149	16	-40	-2664	0	620	multi-exon	FALSE	canonical	1	31300	junction_5	87217.133748262	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	82	1977	30.0	-21	True	NA	NA
PB.8489.28	chr3	-	2819	8	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-12	intron_retention	FALSE	canonical	1	236802	junction_4	345461.57512764493	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	75.0	-1	True	AAGAAA	-45
PB.2567.3	chr12	-	4830	17	novel_not_in_catalog	RPAP3	novel	4370	17	NA	NA	1	617	any annotated donor/acceptor	FALSE	canonical	1	3672	junction_5	90274.06114083588	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	81	1451	30.0	-20	True	NA	NA
PB.2567.2	chr12	-	4974	17	full-splice_match	RPAP3	ENST00000005386.7	4370	17	16	-620	16	620	multi-exon	FALSE	canonical	1	234131	junction_5	52318.32406793383	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	101	2098	30.0	8952	False	NA	NA
PB.2567.5	chr12	-	3665	17	full-splice_match	RPAP3	ENST00000005386.7	4370	17	21	684	-14	-684	multi-exon	FALSE	canonical	1	234131	junction_5	52318.32406793383	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	96	2093	25.0	-35	True	NA	NA
PB.2567.4	chr12	-	4310	17	full-splice_match	RPAP3	ENST00000005386.7	4370	17	16	44	16	-44	multi-exon	FALSE	canonical	1	234131	junction_5	52318.32406793383	NA	3	NA	TRUE	NA	NA	NA	C	coding	665	1998	101	2098	45.0	8952	False	AATAAA	-39
PB.2567.7	chr12	-	3280	17	full-splice_match	RPAP3	ENST00000005386.7	4370	17	32	1058	-3	983	multi-exon	FALSE	canonical	1	234131	junction_5	52318.32406793383	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	85	2082	25.0	-24	True	AATACA	-15
PB.2567.6	chr12	-	3555	16	full-splice_match	RPAP3	ENST00000380650.4	2149	16	-51	-1355	-11	-689	multi-exon	FALSE	canonical	1	31300	junction_5	87217.133748262	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	93	1988	30.0	-32	True	NA	NA
PB.2567.9	chr12	-	2162	16	full-splice_match	RPAP3	ENST00000380650.4	2149	16	-35	22	5	-22	multi-exon	FALSE	canonical	1	31300	junction_5	87217.133748262	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	77	1972	75.0	-16	True	NA	NA
PB.2567.8	chr12	-	2294	17	full-splice_match	RPAP3	ENST00000005386.7	4370	17	10	2066	10	-22	multi-exon	FALSE	canonical	1	234131	junction_5	52318.32406793383	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	107	2104	75.0	8946	False	NA	NA
PB.5058.1	chr17	+	2216	5	novel_not_in_catalog	LINC02210	novel	546	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	2388	junction_3	72735.8970350954	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-6	True	AATAAA	-22
PB.8489.22	chr3	-	2288	12	novel_not_in_catalog	CCNL1	novel	1998	11	NA	NA	16	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	464963.186685296	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	947	1846	40.0	-5	True	AATAAA	-21
PB.8489.25	chr3	-	2870	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	0	-4	intron_retention	FALSE	canonical	1	7034	junction_6	449436.0987637731	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	1467	2429	35.0	-4	True	AATAAA	-20
PB.8489.24	chr3	-	8591	9	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-4	intron_retention	FALSE	canonical	1	340686	junction_6	340907.2601571568	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	7251	8150	35.0	-1	True	AATAAA	-20
PB.8489.27	chr3	-	2894	8	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-12	intron_retention	FALSE	canonical	1	117545	junction_4	370227.74811861356	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	75.0	-1	True	AAGAAA	-45
PB.8489.26	chr3	-	2343	13	novel_not_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	522680.61378059123	NA	3	1	TRUE	NA	NA	NA	C	coding	299	900	1003	1902	35.0	-1	True	AATAAA	-20
PB.8622.1	chr3	-	1586	4	full-splice_match	WDR53	ENST00000332629.6	1679	4	88	5	-29	-5	multi-exon	FALSE	canonical	1	21511	junction_3	47985.39330763987	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	481	1557	35.0	-1	True	AATAAA	-20
PB.11927.3	chr9	-	1637	3	full-splice_match	EXD3	ENST00000465160.2	1585	3	-54	2	-5	-2	multi-exon	FALSE	canonical	1	21408	junction_1	39391.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	252	1010	20.0	14	False	NA	NA
PB.8622.2	chr3	-	2101	3	incomplete-splice_match	WDR53	ENST00000332629.6	1679	4	88	5678	-29	1141	3prime_fragment	FALSE	canonical	1	21511	junction_2	4057.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	481	1011	25.0	-1	True	AATAAA	-27
PB.415.2	chr1	+	2556	15	full-splice_match	SCP2	ENST00000371509.8	1889	15	-26	-641	-17	1	multi-exon	FALSE	canonical	1	12433	junction_3	516332.698249246	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	138	1649	10.0	-26	True	ATTAAA	-17
PB.7851.1	chr22	+	1631	15	full-splice_match	SAMM50	ENST00000350028.4	1717	15	84	2	63	2	multi-exon	TRUE	canonical	1	480324	junction_1	121081.85130992075	NA	0	NA	TRUE	NA	NA	NA	A	coding	469	1410	74	1483	15.0	-2	True	AATAAA	-19
PB.10336.1	chr6	+	4806	1	novel_in_catalog	AFDN	novel	5249	31	NA	NA	-2260	-2238	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-6249	False	ATTAAA	-33
PB.10770.12	chr7	-	2402	16	full-splice_match	PUS7	ENST00000469408.5	2356	16	-42	-4	-33	4	multi-exon	FALSE	canonical	1	71480	junction_15	52874.4408379785	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	282	2267	50.0	9768	False	AATAAA	-24
PB.5555.6	chr19	-	2909	10	novel_in_catalog	TMEM259	novel	2748	11	NA	NA	-7	0	intron_retention	FALSE	canonical	1	377591	junction_4	541506.9848153187	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	1199	2212	5.0	0	True	AATAAA	-17
PB.10650.3	chr7	-	3946	13	novel_in_catalog	SLC25A40	novel	4045	12	NA	NA	153	0	combination_of_known_junctions	FALSE	canonical	1	37489	junction_11	69178.72563045786	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	249	1265	30.0	-1	True	AATAAA	-18
PB.9784.2	chr6	-	5300	22	full-splice_match	RIPOR2	ENST00000643898.1	3348	22	86	-2038	-18	-1	multi-exon	FALSE	canonical	1	121312	junction_2	113042.43906483923	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	69	3212	20.0	-7	True	AATAAA	-22
PB.5555.3	chr19	-	2456	11	full-splice_match	TMEM259	ENST00000356663.7	2748	11	289	3	-39	0	multi-exon	FALSE	canonical	1	827870	junction_7	416170.95694775484	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	48	1757	5.0	232	False	AATAAA	-19
PB.10770.11	chr7	-	3269	16	full-splice_match	PUS7	ENST00000469408.5	2356	16	-9	-904	0	-244	multi-exon	FALSE	canonical	1	71480	junction_15	52874.4408379785	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	249	2234	40.0	3	True	AATAAA	-22
PB.5555.1	chr19	-	2695	10	novel_in_catalog	TMEM259	novel	2748	11	NA	NA	-6	0	intron_retention	FALSE	canonical	1	1269427	junction_2	335190.2250464155	NA	11	1	TRUE	NA	NA	NA	C	coding	354	1065	934	1998	5.0	265	False	AATAAA	-17
PB.8779.52	chr4	+	5050	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	11	1715	intron_retention	FALSE	canonical	1	199597	junction_1	213216.39660756043	NA	3	NA	TRUE	NA	NA	NA	C	coding	579	1740	184	1923	45.0	13	True	AATAAA	-17
PB.10650.7	chr7	-	2873	10	novel_in_catalog	SLC25A40	novel	4045	12	NA	NA	0	-937	combination_of_known_junctions	TRUE	canonical	1	8073	junction_2	77901.21644179319	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	304	963	20.0	-5	True	AATAAA	-14
PB.11696.9	chr9	+	2579	18	novel_not_in_catalog	SMC2	novel	5992	25	NA	NA	2	-14668	any annotated donor/acceptor	FALSE	canonical	1	60129	junction_1	73407.1518873169	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	251	2578	70.0	-23	True	ACTAAA	-41
PB.11696.8	chr9	+	2572	18	novel_not_in_catalog	SMC2	novel	5992	25	NA	NA	1	-14701	any annotated donor/acceptor	FALSE	canonical	1	780	junction_1	85717.062844766	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2295	277	2571	75.0	-24	True	ACTAAA	-8
PB.2577.8	chr12	-	2677	9	full-splice_match	CCNT1	ENST00000261900.7	6973	9	162	4134	-17	435	multi-exon	FALSE	canonical	1	134326	junction_3	30356.553223470135	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	62	2242	45.0	-30	True	AATAGA	-12
PB.2577.9	chr12	-	2226	9	full-splice_match	CCNT1	ENST00000261900.7	6973	9	176	4571	-3	-2	multi-exon	FALSE	canonical	1	134326	junction_3	30356.553223470135	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2178	48	2225	75.0	-16	True	NA	NA
PB.9349.17	chr5	-	3269	21	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	52454	junction_15	37252.94766981534	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	164	2362	50.0	-1	True	AATAAA	-20
PB.11109.11	chr8	-	3099	12	novel_in_catalog	PLAT	novel	2599	15	NA	NA	0	1795	intron_retention	FALSE	canonical	1	466569	junction_6	67869.46686699342	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	99	1577	100.0	-1	True	NA	NA
PB.11696.1	chr9	+	2560	18	novel_in_catalog	SMC2	novel	5992	25	NA	NA	-17	-14668	no_combination_of_known_junctions	FALSE	canonical	1	49312	junction_1	75607.93149570237	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	232	2559	70.0	-42	True	ACTAAA	-41
PB.11696.3	chr9	+	4193	25	full-splice_match	SMC2	ENST00000374793.7	5909	25	-43	1759	-13	6	multi-exon	FALSE	canonical	1	98609	junction_1	60956.737129007575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1197	3594	257	3850	25.0	-38	True	ATTAAA	-23
PB.2577.1	chr12	-	6681	8	full-splice_match	CCNT1	ENST00000618666.4	6915	8	234	0	-45	0	multi-exon	TRUE	canonical	1	42899	junction_2	59778.99821775509	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	781	2106	10.0	301	False	AATAAA	-21
PB.2577.6	chr12	-	6521	9	full-splice_match	CCNT1	ENST00000261900.7	6973	9	90	362	-89	-362	multi-exon	FALSE	canonical	1	134326	junction_3	30356.553223470135	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	134	2314	85.0	-1	True	NA	NA
PB.2577.7	chr12	-	3169	1	incomplete-splice_match	CCNT1	ENST00000618666.4	6915	8	25004	368	3983	-362	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	4243	False	NA	NA
PB.2577.4	chr12	-	6961	9	full-splice_match	CCNT1	ENST00000261900.7	6973	9	8	4	8	-4	multi-exon	TRUE	canonical	1	134326	junction_3	30356.553223470135	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	216	2396	35.0	175	False	AATAAA	-11
PB.11696.6	chr9	+	1089	8	novel_not_in_catalog	SMC2	novel	5992	25	NA	NA	1	-32	any annotated donor/acceptor	FALSE	canonical	1	60129	junction_1	102864.43830595684	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	837	252	1088	65.0	-24	True	AATAAA	-15
PB.860.27	chr1	+	2192	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-16	513	2	-506	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	54	1061	10.0	2	True	NA	NA
PB.3385.6	chr14	+	3607	9	novel_not_in_catalog	KIAA0391	novel	603	2	NA	NA	0	1399	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	132025.8436992546	NA	2	NA	TRUE	NA	NA	NA	C	coding	583	1752	379	2130	35.0	0	True	ATTAAA	-18
PB.11441.2	chr9	+	4451	7	full-splice_match	PDCD1LG2	ENST00000397747.4	2365	7	-55	-2031	-55	2031	multi-exon	FALSE	canonical	1	44578	junction_6	6950.281443142349	NA	4	NA	TRUE	NA	NA	NA	C	coding	273	822	304	1125	80.0	-16	True	NA	NA
PB.2694.1	chr12	-	4367	22	full-splice_match	STAT6	ENST00000300134.7	4034	22	-375	42	-375	-42	multi-exon	FALSE	canonical	1	530763	junction_21	255617.36011087828	NA	26	3	TRUE	NA	NA	NA	C	coding	847	2544	702	3245	75.0	-4	True	AATAAA	-9
PB.2694.2	chr12	-	4119	23	novel_in_catalog	STAT6	novel	4034	22	NA	NA	-15	-41	intron_retention	FALSE	canonical	1	36580	junction_21	345238.5071667427	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	453	2996	75.0	415	False	AATAAA	-10
PB.3794.1	chr15	-	1201	5	full-splice_match	OIP5	ENST00000220514.7	1236	5	30	5	30	-5	multi-exon	FALSE	canonical	1	179098	junction_2	18176.98429848857	NA	0	NA	TRUE	NA	NA	NA	A	coding	229	690	31	720	20.0	-1	True	AATAAA	-15
PB.2694.4	chr12	-	4041	23	novel_in_catalog	STAT6	novel	4034	22	NA	NA	0	-41	intron_retention	FALSE	canonical	1	33128	junction_21	345612.0789561478	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	375	2918	75.0	-1	True	AATAAA	-10
PB.2694.5	chr12	-	4609	22	novel_not_in_catalog	STAT6	novel	4034	22	NA	NA	14	-5	intron_retention	TRUE	canonical	1	13720	junction_11	395524.5847397721	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	2086	3450	50.0	-1	True	AATAAA	-21
PB.2694.6	chr12	-	3987	22	novel_in_catalog	STAT6	novel	4034	22	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	36580	junction_20	388168.63235474634	NA	1	NA	TRUE	NA	NA	NA	C	coding	737	2214	615	2828	50.0	-8	True	AATAAA	-21
PB.2694.7	chr12	-	3810	21	full-splice_match	STAT6	ENST00000554764.5	2777	21	-36	-997	-15	-41	multi-exon	FALSE	canonical	1	77694	junction_19	314307.8068719579	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	474	2687	75.0	415	False	AATAAA	-10
PB.3385.8	chr14	+	2206	7	full-splice_match	KIAA0391	ENST00000250377.11	6118	7	-12	3924	0	0	multi-exon	FALSE	canonical	1	29746	junction_2	135435.7814752274	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	379	2082	30.0	0	True	GATAAA	-18
PB.3385.9	chr14	+	6183	8	full-splice_match	KIAA0391	ENST00000534898.8	2611	8	-16	-3556	0	7	multi-exon	FALSE	canonical	1	161630	junction_2	91224.46785142411	NA	4	NA	TRUE	NA	NA	NA	C	coding	583	1752	377	2128	25.0	2	True	AATAAA	-28
PB.415.5	chr1	+	2671	16	full-splice_match	SCP2	ENST00000371514.7	2811	16	50	90	2	3	multi-exon	FALSE	canonical	1	256332	junction_1	484259.8808887641	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	119	1762	10.0	-7	True	ATTAAA	-19
PB.12270.1	chrX	-	2199	10	novel_not_in_catalog	MBNL3	novel	11294	7	NA	NA	-41	0	any annotated donor/acceptor	FALSE	canonical	1	28239	junction_9	92580.00352901321	NA	0	NA	TRUE	NA	NA	NA	B	coding	369	1110	910	2019	70.0	-19	True	NA	NA
PB.12270.2	chrX	-	2121	9	novel_not_in_catalog	MBNL3	novel	11294	7	NA	NA	-37	0	any annotated donor/acceptor	FALSE	canonical	1	28239	junction_8	81918.4798259831	NA	1	NA	TRUE	NA	NA	NA	B	coding	354	1065	906	1970	70.0	-15	True	NA	NA
PB.3627.1	chr14	-	2033	15	full-splice_match	LGMN	ENST00000393218.6	2115	15	114	-32	5	-3	multi-exon	FALSE	canonical	0	0	junction_13	312018.64602312155	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	225	1526	35.0	83	False	AATAAA	-18
PB.3627.3	chr14	-	1806	13	full-splice_match	LGMN	ENST00000557434.5	1797	13	18	-27	0	-3	multi-exon	FALSE	canonical	1	27305	junction_2	274915.6191779074	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	169	1299	35.0	-1	True	AATAAA	-18
PB.3627.2	chr14	-	1977	14	full-splice_match	LGMN	ENST00000334869.8	2055	14	75	3	0	-3	multi-exon	FALSE	canonical	1	328573	junction_3	233590.01846020026	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	169	1470	35.0	-1	True	AATAAA	-18
PB.3627.5	chr14	-	1936	13	novel_in_catalog	LGMN	novel	1728	12	NA	NA	-14	5	no_combination_of_known_junctions	FALSE	canonical	1	23613	junction_1	277986.24767523224	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	201	1490	35.0	-11	False	AATAAA	-13
PB.3627.4	chr14	-	1759	12	full-splice_match	LGMN	ENST00000555699.5	1728	12	-36	5	-3	-3	multi-exon	FALSE	canonical	1	33243	junction_1	274314.64828652877	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	190	1308	35.0	0	True	AATAAA	-18
PB.3627.6	chr14	-	3420	2	full-splice_match	LGMN	ENST00000557315.1	556	2	-3	-2861	0	2861	multi-exon	FALSE	canonical	1	442037	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	ATTAAA	-19
PB.3776.6	chr15	+	1899	12	full-splice_match	IVD	ENST00000487418.6	1809	12	0	-90	0	90	multi-exon	FALSE	canonical	1	286288	junction_1	77544.84350606534	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	34	1305	10.0	0	True	AATAAA	-16
PB.3776.7	chr15	+	4331	12	full-splice_match	IVD	ENST00000487418.6	1809	12	2	-2524	2	-8	multi-exon	FALSE	canonical	1	286288	junction_1	77544.84350606534	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	32	1303	75.0	2	True	AATAAA	-19
PB.4768.8	chr17	+	9084	8	incomplete-splice_match	NDEL1	ENST00000334527.11	2372	9	48	9	1	-2	intron_retention	FALSE	canonical	1	328272	junction_1	74100.98525936186	NA	33	2	TRUE	NA	NA	NA	C	coding	315	948	150	1097	50.0	-13	True	AATAAA	-7
PB.4768.9	chr17	+	2072	8	novel_in_catalog	NDEL1	novel	588	5	NA	NA	-36	-2	no_combination_of_known_junctions	FALSE	canonical	1	4937	junction_2	174630.41743671818	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-7
PB.3776.2	chr15	+	3548	12	novel_not_in_catalog	IVD	novel	668	5	NA	NA	0	-859	any annotated donor/acceptor	FALSE	canonical	1	7877	junction_7	149618.9430649886	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	34	864	40.0	0	True	ATTAAA	-10
PB.3776.3	chr15	+	3491	12	full-splice_match	IVD	ENST00000487418.6	1809	12	0	-1682	0	-850	multi-exon	FALSE	canonical	1	286288	junction_1	77544.84350606534	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	34	1305	30.0	0	True	ATTAAA	-19
PB.1164.1	chr1	-	3317	8	full-splice_match	ACBD3	ENST00000366812.5	3573	8	254	2	254	-2	multi-exon	FALSE	canonical	1	296097	junction_7	94151.75577670729	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	162	1388	25.0	241	False	ATTAAA	-13
PB.3776.1	chr15	+	2693	12	full-splice_match	IVD	ENST00000487418.6	1809	12	-4	-880	-4	274	multi-exon	FALSE	canonical	1	286288	junction_1	77544.84350606534	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	38	1309	65.0	-4	True	NA	NA
PB.4768.2	chr17	+	2272	10	full-splice_match	NDEL1	ENST00000402554.7	1858	10	42	-456	23	-39	multi-exon	FALSE	canonical	1	108835	junction_8	164846.26416351288	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	109	1095	45.0	28	True	NA	NA
PB.4768.3	chr17	+	2700	10	novel_in_catalog	NDEL1	novel	588	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	19579	junction_1	202789.36199111983	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	498	1484	45.0	-28	True	AATAAA	-9
PB.6990.137	chr2	-	4832	25	incomplete-splice_match	FN1	ENST00000356005.8	7846	44	0	30179	0	-8886	3prime_fragment	FALSE	canonical	1	7013395	junction_24	974420.4837923246	NA	2	NA	TRUE	NA	NA	NA	C	coding	1335	4008	267	4274	20.0	-1	True	AATAAA	-17
PB.4768.1	chr17	+	2280	8	novel_in_catalog	NDEL1	novel	588	5	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	8826	junction_6	168570.7784212644	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	205	987	45.0	-5	True	AATAAA	-9
PB.4768.6	chr17	+	2660	9	novel_in_catalog	NDEL1	novel	588	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	19579	junction_1	165967.8903266664	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	493	1530	45.0	-23	True	AATAAA	-9
PB.4768.7	chr17	+	2413	10	novel_in_catalog	NDEL1	novel	588	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	20502	junction_2	199324.24406317968	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-22	True	AATAAA	-9
PB.4768.4	chr17	+	2263	9	full-splice_match	NDEL1	ENST00000334527.11	2372	9	102	7	36	0	multi-exon	FALSE	canonical	1	327200	junction_8	84876.38608293829	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	96	1133	45.0	-74	False	AATAAA	-9
PB.4768.5	chr17	+	2474	10	novel_in_catalog	NDEL1	novel	588	5	NA	NA	36	-39	combination_of_known_junctions	FALSE	canonical	1	5014	junction_2	203340.2458273713	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	307	1383	45.0	-74	False	NA	NA
PB.1917.1	chr11	-	2090	3	full-splice_match	HARBI1	ENST00000326737.3	1967	3	46	-169	46	169	multi-exon	FALSE	canonical	1	26459	junction_2	26107.5	NA	24	NA	TRUE	NA	NA	NA	C	coding	349	1050	203	1252	80.0	45	True	NA	NA
PB.1917.3	chr11	-	1919	1	novel_in_catalog	HARBI1	novel	1967	3	NA	NA	70	773	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	241	726	921	1646	90.0	737	False	NA	NA
PB.1917.2	chr11	-	1949	3	full-splice_match	HARBI1	ENST00000326737.3	1967	3	18	0	18	0	multi-exon	FALSE	canonical	1	26459	junction_2	26107.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	231	1280	100.0	17	True	NA	NA
PB.262.4	chr1	+	2808	10	novel_in_catalog	RBBP4	novel	1788	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	99065	junction_2	185679.40963877083	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	1165	1863	20.0	-31	True	AATAAA	-14
PB.11611.2	chr9	+	4371	3	full-splice_match	GCNT1	ENST00000444201.6	5476	3	67	1038	-3	-1038	multi-exon	FALSE	canonical	1	54868	junction_1	50704.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	428	1287	377	1663	75.0	-3	True	NA	NA
PB.8211.1	chr3	-	3408	1	antisense	novelGene_ATXN7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	104	315	1390	1704	100.0	1497	False	NA	NA
PB.9349.12	chr5	-	3819	20	full-splice_match	MCTP1	ENST00000429576.6	3159	20	0	-660	0	660	multi-exon	FALSE	canonical	1	34555	junction_5	44842.67064018427	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	164	2242	35.0	-1	True	ATTAAA	-15
PB.4929.9	chr17	-	3246	14	incomplete-splice_match	DDX52	ENST00000617633.4	6362	15	2	7052	2	2938	3prime_fragment	FALSE	canonical	1	228023	junction_13	46621.643582856064	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	43	1788	35.0	1	True	AATAAA	-25
PB.7107.11	chr2	-	4358	18	full-splice_match	PASK	ENST00000358649.8	4326	18	-26	-6	2	4	multi-exon	FALSE	canonical	1	9541	junction_4	71753.5464996698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1330	3993	91	4083	20.0	-2	True	ATTAAA	-23
PB.11485.1	chr9	-	3859	2	full-splice_match	CDKN2B	ENST00000276925.6	3911	2	55	-3	-36	3	multi-exon	FALSE	canonical	1	70396	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	377	772	15.0	-4	True	AATAAA	-22
PB.3918.9	chr15	+	3336	14	novel_in_catalog	SNX1	novel	1869	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	592656	junction_1	148789.66323619673	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	15	1043	30.0	-2	True	AATAAA	-17
PB.341.4	chr1	-	2822	15	novel_not_in_catalog	P3H1	novel	2705	15	NA	NA	-8	0	intron_retention	FALSE	canonical	1	3660	junction_10	232255.3684869857	NA	16	2	TRUE	NA	NA	NA	C	coding	312	939	1562	2500	25.0	-4	True	AATAAA	-19
PB.341.5	chr1	-	2692	16	novel_in_catalog	P3H1	novel	2705	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1644	junction_6	195814.0748502234	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	60	1904	25.0	-3	True	AATAAA	-19
PB.341.6	chr1	-	2589	15	full-splice_match	P3H1	ENST00000296388.9	2585	15	-4	0	-4	0	multi-exon	FALSE	canonical	1	349955	junction_14	96429.32983841967	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	57	2267	25.0	0	True	AATAAA	-19
PB.341.7	chr1	-	2615	15	novel_in_catalog	P3H1	novel	2705	15	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	18695	junction_13	193078.73708122974	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	1073	2158	25.0	-5	True	AATAAA	-18
PB.9383.5	chr5	+	4639	8	full-splice_match	SLC25A46	ENST00000355943.7	2385	8	135	-2389	88	12	multi-exon	FALSE	canonical	1	222703	junction_1	88395.39417519305	NA	4	NA	TRUE	NA	NA	NA	C	coding	272	819	430	1248	35.0	122	False	AATAAA	-30
PB.6325.15	chr2	+	2194	21	incomplete-splice_match	DDX1	ENST00000621973.1	2183	22	480	9	480	0	5prime_fragment	FALSE	canonical	1	899238	junction_8	264895.15496492194	NA	3	NA	TRUE	NA	NA	NA	C	coding	648	1947	54	2000	20.0	-9055	False	AATAAA	-13
PB.262.5	chr1	+	3809	12	full-splice_match	RBBP4	ENST00000373493.9	7943	12	34	4100	4	1454	multi-exon	FALSE	canonical	1	99065	junction_2	172483.3475357563	NA	19	NA	TRUE	NA	NA	NA	C	coding	425	1278	126	1403	15.0	-28	True	NA	NA
PB.341.3	chr1	-	2778	14	novel_in_catalog	P3H1	novel	2705	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	60072	junction_1	157543.66010443133	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	53	1279	25.0	4	True	AATAAA	-19
PB.11611.3	chr9	+	5416	4	full-splice_match	GCNT1	ENST00000376730.4	5518	4	0	102	0	-100	multi-exon	FALSE	canonical	1	29452	junction_2	55864.9104358004	NA	2	NA	TRUE	NA	NA	NA	C	coding	428	1287	484	1770	35.0	8	True	AATAAA	-19
PB.6309.3	chr2	+	3067	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	9	195	0	-195	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	61	1230	25.0	0	True	ATTAAA	-19
PB.7329.9	chr20	-	3579	21	novel_in_catalog	ELMO2	novel	3669	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	27552	junction_17	110609.39111146938	NA	8	2	TRUE	NA	NA	NA	C	coding	632	1899	374	2272	25.0	-13	True	AATAAA	-16
PB.8895.4	chr4	-	5929	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	142	4	2	-4	multi-exon	TRUE	canonical	1	6082	junction_5	72377.96737535363	NA	45	2	TRUE	NA	NA	NA	C	coding	379	1140	14	1153	30.0	33	True	AATAAA	-19
PB.4929.5	chr17	-	2748	15	full-splice_match	DDX52	ENST00000617633.4	6362	15	18	3596	0	-261	multi-exon	FALSE	canonical	1	228023	junction_14	45027.76992743206	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	27	1826	20.0	-7	True	GATAAA	-39
PB.3637.9	chr14	-	2780	10	novel_not_in_catalog	DDX24	novel	5612	9	NA	NA	-3	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	439351.4868656549	NA	3	1	TRUE	NA	NA	NA	C	coding	803	2412	103	2514	20.0	-14	True	ATTAAA	-11
PB.3469.13	chr14	+	1958	11	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	0	8287	combination_of_known_junctions	FALSE	canonical	1	3108	junction_5	35661.046838251954	NA	1	NA	TRUE	NA	NA	NA	B	coding	174	525	538	1062	75.0	0	True	ACTAAA	-44
PB.4929.4	chr17	-	3009	15	full-splice_match	DDX52	ENST00000617633.4	6362	15	18	3335	0	0	multi-exon	FALSE	canonical	1	228023	junction_14	45027.76992743206	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	27	1826	35.0	-7	True	AATATA	-18
PB.3637.2	chr14	-	2569	9	novel_not_in_catalog	DDX24	novel	5612	9	NA	NA	4	1	intron_retention	FALSE	canonical	1	9299	junction_6	450953.786887304	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	96	2297	15.0	-7	True	ATTAAA	-17
PB.11852.1	chr9	-	2117	1	antisense	novelGene_FUBP3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	20	63	326	388	15.0	NA	False	NA	NA
PB.3637.1	chr14	-	5563	9	full-splice_match	DDX24	ENST00000621632.4	5612	9	45	4	-2	-4	multi-exon	FALSE	canonical	1	786468	junction_6	237484.69292090044	NA	45	1	TRUE	NA	NA	NA	C	coding	859	2580	88	2667	55.0	1	True	AATAAA	-12
PB.3637.6	chr14	-	2991	10	novel_not_in_catalog	DDX24	novel	5612	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	120	junction_3	545347.1474982192	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	92	2098	20.0	-3	True	ATTAAA	-13
PB.4929.7	chr17	-	2272	14	novel_in_catalog	DDX52	novel	2951	6	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	3436	junction_1	93986.01034889062	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	25	1731	25.0	-5	True	AATAAA	-12
PB.3637.4	chr14	-	2881	9	full-splice_match	DDX24	ENST00000621632.4	5612	9	35	2696	2	-22	multi-exon	FALSE	canonical	1	786468	junction_6	237484.69292090044	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	98	2677	20.0	-9	True	NA	NA
PB.3637.5	chr14	-	5588	8	full-splice_match	DDX24	ENST00000555762.1	5573	8	-16	1	-2	-1	multi-exon	FALSE	canonical	1	786468	junction_5	253325.82579237307	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	102	2114	15.0	-13	True	ATTAAA	-15
PB.4178.3	chr16	+	4339	7	novel_in_catalog	TBC1D24	novel	6673	7	NA	NA	-47	-57	intron_retention	FALSE	canonical	1	4464	junction_1	44630.114761037	NA	2	NA	TRUE	NA	NA	NA	C	coding	553	1662	240	1901	15.0	-72	False	AATAGA	-25
PB.4178.2	chr16	+	3719	7	full-splice_match	TBC1D24	ENST00000567020.6	6673	7	78	2876	2	3	multi-exon	FALSE	canonical	1	53126	junction_1	30094.58870193924	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	158	1819	25.0	2	True	ATTAAA	-18
PB.4178.1	chr16	+	6590	7	full-splice_match	TBC1D24	ENST00000567020.6	6673	7	75	8	-1	-4	multi-exon	FALSE	canonical	1	53126	junction_1	30094.58870193924	NA	3	NA	TRUE	NA	NA	NA	C	coding	553	1662	161	1822	50.0	-1	True	NA	NA
PB.4929.6	chr17	-	2365	15	full-splice_match	DDX52	ENST00000617633.4	6362	15	20	3977	1	0	multi-exon	FALSE	canonical	1	228023	junction_14	45027.76992743206	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	25	1824	25.0	-5	True	AATAAA	-12
PB.7839.6	chr22	-	3298	8	novel_in_catalog	POLDIP3	novel	3337	9	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	12548	junction_1	231290.10252662242	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	31	1059	15.0	-5	True	AATAAA	-15
PB.7839.4	chr22	-	3283	8	full-splice_match	POLDIP3	ENST00000348657.6	3323	8	39	1	-15	0	multi-exon	FALSE	canonical	1	98023	junction_6	193442.2628632985	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	36	1214	15.0	-10	True	AATAAA	-15
PB.7839.5	chr22	-	3309	10	novel_not_in_catalog	POLDIP3	novel	3337	9	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	15149	junction_1	203700.211951804	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	74	1339	15.0	1	True	AATAAA	-15
PB.485.3	chr1	+	2990	16	full-splice_match	MIGA1	ENST00000443751.3	6409	16	12	3407	0	-2193	multi-exon	FALSE	canonical	1	39843	junction_14	27265.61813582976	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	21	1922	70.0	-22	True	NA	NA
PB.7047.11	chr2	+	4040	8	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	6	627	combination_of_known_junctions	FALSE	canonical	1	9827	junction_1	73521.1111891666	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	2087	3034	30.0	8	True	AATAAA	-14
PB.2132.1	chr11	+	1692	2	full-splice_match	FADD	ENST00000301838.4	1841	2	142	7	142	-7	multi-exon	FALSE	canonical	1	206254	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	208	627	156	782	35.0	9	True	ATTAAA	-26
PB.7839.9	chr22	-	3437	10	novel_in_catalog	POLDIP3	novel	3337	9	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	1	21570	junction_6	246093.85182928247	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	39	695	15.0	-13	True	AATAAA	-14
PB.8092.20	chr3	-	5102	16	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1768	-9	intron_retention	FALSE	canonical	1	2456	junction_5	87529.93690557154	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	1529	2821	45.0	-3	True	AATAAA	-9
PB.10994.14	chr8	+	2421	1	novel_in_catalog	VPS37A	novel	4906	12	NA	NA	13395	-5214	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	4319	False	NA	NA
PB.4929.3	chr17	-	3308	13	novel_in_catalog	DDX52	novel	2951	6	NA	NA	1	3	intron_retention	FALSE	canonical	1	228023	junction_12	34218.14041344396	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	25	1431	35.0	-5	True	AATATA	-21
PB.11876.1	chr9	-	1950	7	full-splice_match	GBGT1	ENST00000372040.8	1985	7	34	1	3	-1	multi-exon	FALSE	canonical	1	46423	junction_6	17679.257013674403	NA	1	NA	TRUE	NA	NA	NA	A	coding	347	1044	279	1322	15.0	2	True	AATAAA	-21
PB.569.2	chr1	-	2846	5	full-splice_match	EXTL2	ENST00000370113.7	2835	5	-11	0	-11	0	multi-exon	FALSE	canonical	1	34541	junction_4	69426.496888796	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	299	1291	20.0	7	True	AATAAA	-19
PB.1907.1	chr11	+	2165	15	full-splice_match	ACCS	ENST00000263776.8	2362	15	2	195	2	126	multi-exon	FALSE	canonical	1	38369	junction_8	36145.59057450288	NA	0	NA	TRUE	NA	NA	NA	A	coding	501	1506	433	1938	20.0	0	True	ATTAAA	-17
PB.569.4	chr1	-	3421	6	novel_not_in_catalog	EXTL2	novel	3146	4	NA	NA	11	-6	any annotated donor/acceptor	FALSE	canonical	1	7272	junction_5	73235.99206565034	NA	30	1	TRUE	NA	NA	NA	C	coding	330	993	880	1872	15.0	831	False	AATAAA	-13
PB.6477.22	chr2	-	4094	26	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	-3	379	intron_retention	FALSE	canonical	1	59518	junction_18	61874.77895564233	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	1742	2710	50.0	-11	True	ATTAAA	-22
PB.11611.1	chr9	+	2153	3	full-splice_match	GCNT1	ENST00000480311.5	461	3	-53	-1639	17	1639	multi-exon	FALSE	canonical	1	54868	junction_1	50704.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	484	1713	40.0	-53	True	AATAAA	-28
PB.9964.8	chr6	-	2642	12	novel_not_in_catalog	MTCH1	novel	2006	12	NA	NA	-21	-1	any annotated donor/acceptor	FALSE	canonical	1	9889	junction_1	637615.959642889	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	166	1257	5.0	0	True	AATAAA	-17
PB.485.2	chr1	+	6403	16	novel_in_catalog	MIGA1	novel	5288	16	NA	NA	-2	0	intron_retention	FALSE	canonical	1	20721	junction_1	31218.559505097815	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	126	1928	20.0	-36	True	AATAAA	-12
PB.428.1	chr1	+	1460	7	full-splice_match	MRPL37	ENST00000360840.9	1483	7	20	3	-9	-1	multi-exon	FALSE	canonical	1	1096067	junction_5	230847.4975329432	NA	0	NA	TRUE	NA	NA	NA	A	coding	423	1272	58	1329	20.0	4	True	AATAAA	-19
PB.8255.4	chr3	-	2179	4	full-splice_match	CLDND1	ENST00000507411.5	815	4	-52	-1312	4	-24	multi-exon	FALSE	canonical	1	586990	junction_3	204383.70417971737	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	98	856	75.0	-3	True	NA	NA
PB.10533.14	chr7	-	2120	11	novel_in_catalog	TBRG4	novel	2243	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	6680	junction_9	250796.53800523243	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	106	1896	10.0	-1	True	NA	NA
PB.1170.5	chr1	+	2196	12	novel_in_catalog	COQ8A	novel	5523	20	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	2132	junction_1	175455.85305753915	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	283	1389	5.0	2	True	AATAAA	-19
PB.10533.15	chr7	-	2047	10	novel_not_in_catalog	TBRG4	novel	2243	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	34502	junction_6	317849.5594891271	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	114	1139	10.0	-9	True	NA	NA
PB.10533.16	chr7	-	4922	6	novel_in_catalog	TBRG4	novel	2243	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	22978	junction_5	344115.79516703385	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	85	1065	10.0	-24	True	NA	NA
PB.6840.10	chr2	+	2651	13	novel_in_catalog	PDK1	novel	842	5	NA	NA	-5	-353	combination_of_known_junctions	FALSE	canonical	1	34766	junction_3	100753.82663821288	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	55	1425	40.0	7	True	AATAAA	-16
PB.7057.43	chr2	+	3542	25	novel_in_catalog	SP100	novel	3882	25	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	46376	junction_24	271919.2879411273	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	78	2657	30.0	0	True	NA	NA
PB.7057.42	chr2	+	3894	13	novel_in_catalog	SP100	novel	3882	25	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	431024	junction_1	117642.90494708504	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	78	689	25.0	0	True	NA	NA
PB.7057.41	chr2	+	2106	22	novel_in_catalog	SP100	novel	3882	25	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	40055	junction_1	276401.53825512703	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	79	2010	25.0	-1	True	CATAAA	-13
PB.7057.40	chr2	+	1715	19	novel_in_catalog	SP100	novel	3882	25	NA	NA	-3	-11	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	220636.45825527588	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1635	80	1714	65.0	-2	True	AAGAAA	-41
PB.7057.47	chr2	+	2345	14	novel_in_catalog	SP100	novel	3882	25	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	431024	junction_1	113212.78013169683	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	1277	1930	30.0	0	True	NA	NA
PB.7057.46	chr2	+	2634	25	full-splice_match	SP100	ENST00000264052.9	3882	25	278	970	-1	-970	multi-exon	FALSE	canonical	1	46376	junction_24	271806.27385279955	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	78	2633	75.0	0	True	AAAAAG	-17
PB.7057.45	chr2	+	2701	14	novel_in_catalog	SP100	novel	3882	25	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	431024	junction_1	115442.06027231652	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	78	1289	25.0	0	True	NA	NA
PB.7057.44	chr2	+	3354	29	full-splice_match	SP100	ENST00000340126.8	2926	29	-46	-382	-1	382	multi-exon	FALSE	canonical	1	98698	junction_15	276768.5555113155	NA	2	NA	TRUE	NA	NA	NA	C	coding	885	2658	78	2735	60.0	0	True	NA	NA
PB.11772.1	chr9	-	4525	1	incomplete-splice_match	RC3H2	ENST00000373670.5	9248	20	49026	4	2485	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-17
PB.7057.48	chr2	+	1869	15	full-splice_match	SP100	ENST00000409341.5	1898	15	39	-10	20	-3	multi-exon	FALSE	canonical	1	431024	junction_1	116997.9590834553	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	12	1454	30.0	41	False	NA	NA
PB.11280.11	chr8	-	4493	8	full-splice_match	RRM2B	ENST00000395912.6	900	8	-86	-3507	-21	-124	multi-exon	FALSE	canonical	1	6116	junction_7	96819.63657592337	NA	3	NA	TRUE	NA	NA	NA	C	coding	299	900	87	986	15.0	-24	True	AATAAA	-14
PB.8892.6	chr4	-	2167	8	novel_in_catalog	TRMT10A	novel	3516	8	NA	NA	-3	473	combination_of_known_junctions	FALSE	canonical	1	11219	junction_7	31988.042224990186	NA	3	1	TRUE	NA	NA	NA	C	coding	339	1020	200	1219	20.0	-11	True	AATACA	-44
PB.4186.1	chr16	-	1966	6	full-splice_match	PRSS27	ENST00000302641.7	1130	6	-837	1	-501	0	multi-exon	FALSE	canonical	1	18913	junction_4	15119.50802903322	NA	1	NA	TRUE	NA	NA	NA	A	coding	290	873	893	1765	10.0	-829	False	AATAAA	-22
PB.6518.2	chr2	-	2853	6	full-splice_match	PPP3R1	ENST00000234310.7	3023	6	171	-1	171	1	multi-exon	FALSE	canonical	1	401857	junction_5	265031.64672665036	NA	2	NA	TRUE	NA	NA	NA	A	coding	170	513	234	746	20.0	313	False	AATAAA	-16
PB.6291.1	chr2	-	2676	1	novel_in_catalog	AC108488.2	novel	421	3	NA	NA	3851	-9447	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-7255	False	NA	NA
PB.7112.15	chr2	+	3780	26	novel_in_catalog	FARP2	novel	4051	27	NA	NA	12	4	intron_retention	FALSE	canonical	1	911	junction_1	48410.450426064	NA	3	NA	TRUE	NA	NA	NA	C	coding	968	2907	154	3060	5.0	1	True	AATAAA	-22
PB.737.3	chr1	-	2617	3	novel_in_catalog	CDC42SE1	novel	3498	8	NA	NA	-7	294	intron_retention	FALSE	canonical	1	806713	junction_2	335514.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	626	955	5.0	-84	False	ATTAAA	-30
PB.737.2	chr1	-	3042	6	full-splice_match	CDC42SE1	ENST00000540998.5	3181	6	52	87	18	-87	multi-exon	FALSE	canonical	1	107591	junction_4	632451.9965877568	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-25	True	AATAAA	-15
PB.10312.9	chr6	-	2559	6	novel_not_in_catalog	SOD2	novel	14266	5	NA	NA	4	-422	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1345964.4606351834	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	158	826	30.0	1115	False	ATTAAA	-21
PB.10312.8	chr6	-	2817	6	novel_not_in_catalog	SOD2	novel	14266	5	NA	NA	-8	-422	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1345964.4606351834	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	170	838	30.0	1103	False	ATTAAA	-21
PB.737.7	chr1	-	2644	2	novel_in_catalog	CDC42SE1	novel	3498	8	NA	NA	-13	-554	intron_retention	FALSE	canonical	1	806713	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	598	927	70.0	-56	True	NA	NA
PB.737.6	chr1	-	1915	4	full-splice_match	CDC42SE1	ENST00000483763.5	2379	4	-84	548	-9	284	multi-exon	FALSE	canonical	1	806713	junction_3	305270.0602639498	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	628	957	20.0	-86	False	ATTAAA	-20
PB.737.5	chr1	-	2714	4	novel_in_catalog	CDC42SE1	novel	3498	8	NA	NA	-12	284	intron_retention	FALSE	canonical	1	107591	junction_2	643582.7739927649	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	733	1062	20.0	-55	True	ATTAAA	-20
PB.737.4	chr1	-	1362	5	full-splice_match	CDC42SE1	ENST00000357235.5	3045	5	-5	1688	-5	285	multi-exon	FALSE	canonical	1	806713	junction_4	265186.3711480805	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-82	False	ATTAAA	-21
PB.12384.4	chrY	+	3574	4	full-splice_match	TTTY15	ENST00000417071.1	882	4	-165	-2527	38	341	multi-exon	FALSE	canonical	1	8430	junction_3	39530.42697579788	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	19	True	NA	NA
PB.12384.5	chrY	+	3761	4	full-splice_match	TTTY15	ENST00000440408.5	5284	4	73	1450	73	342	multi-exon	FALSE	canonical	1	43713	junction_3	22933.342281974998	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	2	True	NA	NA
PB.10312.1	chr6	-	3220	6	novel_not_in_catalog	SOD2	novel	14266	5	NA	NA	12	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1345964.4606351834	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	150	818	25.0	1123	False	AATAAA	-19
PB.2677.12	chr12	-	3044	12	novel_in_catalog	CS	novel	2811	11	NA	NA	-27	-2	intron_retention	FALSE	canonical	1	4413	junction_11	334665.9745451148	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	463	1665	30.0	322	False	AATAAA	-12
PB.10312.7	chr6	-	4076	4	full-splice_match	SOD2	ENST00000337404.8	991	4	-45	-3040	5	-6	multi-exon	FALSE	canonical	1	96656	junction_2	1619067.8184211089	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	157	708	35.0	1116	False	AATAAA	-12
PB.12384.1	chrY	+	5236	4	full-splice_match	TTTY15	ENST00000440408.5	5284	4	17	31	17	-31	multi-exon	FALSE	canonical	1	43713	junction_3	22933.342281974998	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-2	True	AATAAA	-13
PB.12384.2	chrY	+	9697	48	novel_not_in_catalog	TTTY15	novel	630	4	NA	NA	18	168610	any annotated donor/acceptor	TRUE	canonical	1	22528	junction_3	28534.991175060783	NA	1	NA	TRUE	NA	NA	NA	C	coding	2555	7668	603	8270	0.0	-1	True	AATAAA	-16
PB.12384.3	chrY	+	4992	4	full-splice_match	TTTY15	ENST00000417071.1	882	4	-167	-3943	36	-35	multi-exon	FALSE	canonical	1	8430	junction_3	39530.42697579788	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	17	True	AATAAA	-9
PB.2210.1	chr11	-	7401	2	full-splice_match	FZD4	ENST00000531380.1	7383	2	-15	-3	-15	3	multi-exon	FALSE	canonical	1	91799	junction_1	0.0	NA	10	NA	TRUE	NA	NA	NA	A	coding	537	1614	322	1935	15.0	-12	True	AATAAA	-17
PB.1386.1	chr10	-	1923	3	full-splice_match	CXCL12	ENST00000343575.10	1857	3	-5	-61	0	61	multi-exon	FALSE	canonical	1	355402	junction_2	84615.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	89	270	93	362	25.0	-1	True	AATAAA	-19
PB.4581.3	chr16	-	4518	14	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	2	-1	intron_retention	FALSE	canonical	1	123487	junction_13	62623.962236331834	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	2087	3433	45.0	5	True	ATTAAA	-16
PB.4581.2	chr16	-	3843	15	full-splice_match	TAF1C	ENST00000566732.5	2972	15	-14	-857	-1	0	multi-exon	FALSE	canonical	1	123487	junction_14	60403.128164577094	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	226	2757	40.0	-17	True	ATTAAA	-17
PB.4581.1	chr16	-	3975	14	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	123487	junction_13	56463.2070809817	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	1506	2888	40.0	-20	True	ATTAAA	-18
PB.4581.7	chr16	-	3738	13	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	2	-1	intron_retention	FALSE	canonical	1	4851	junction_12	81894.81321941613	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	1271	2653	45.0	5	True	ATTAAA	-16
PB.4581.6	chr16	-	3775	15	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	35827	junction_14	73840.5198205731	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	159	2690	45.0	-21	True	ATTAAA	-16
PB.4581.5	chr16	-	3853	14	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	35827	junction_13	74412.22445461513	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2610	159	2768	45.0	-21	True	ATTAAA	-16
PB.4581.4	chr16	-	4066	13	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	123487	junction_12	57815.24598715771	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1368	2981	45.0	-20	True	ATTAAA	-16
PB.9383.3	chr5	+	4011	8	full-splice_match	SLC25A46	ENST00000355943.7	2385	8	20	-1646	20	-731	multi-exon	FALSE	canonical	1	222703	junction_1	88395.39417519305	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	107	1363	65.0	7	True	ATTAAA	-30
PB.1808.8	chr11	-	3040	7	full-splice_match	TMEM41B	ENST00000528080.5	3968	7	200	728	-13	-728	multi-exon	FALSE	canonical	1	147679	junction_6	39630.416969026315	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	140	1015	20.0	12	True	AATACA	-17
PB.4581.9	chr16	-	3923	14	full-splice_match	TAF1C	ENST00000567759.5	3879	14	-46	2	0	-2	multi-exon	FALSE	canonical	1	123487	junction_13	59374.65780106933	NA	1	NA	TRUE	NA	NA	NA	C	coding	869	2610	230	2839	40.0	-21	True	ATTAAA	-15
PB.4581.8	chr16	-	3670	15	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	24525	junction_14	75889.26967215094	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	255	2585	45.0	-6	True	ATTAAA	-16
PB.869.4	chr1	+	2220	5	novel_in_catalog	NIT1	novel	790	6	NA	NA	2	1	intron_retention	FALSE	canonical	1	366013	junction_1	65250.8541376088	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	997	1917	10.0	-2	True	CATAAA	-5
PB.1170.1	chr1	+	3427	14	novel_in_catalog	COQ8A	novel	5523	20	NA	NA	-27	-1	intron_retention	TRUE	canonical	1	324522	junction_1	97421.6060912993	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	1597	2622	5.0	0	True	AATAAA	-17
PB.1808.4	chr11	-	2141	7	novel_in_catalog	TMEM41B	novel	1443	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	40623	junction_1	76889.95333465586	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	1269	1703	30.0	-41	True	AATAAA	-18
PB.6477.27	chr2	-	2952	28	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	1	378	any annotated donor/acceptor	FALSE	canonical	1	1389	junction_19	74501.46562283603	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	1229	2707	50.0	-7	True	ATTAAA	-21
PB.4263.9	chr16	+	3807	31	full-splice_match	NOMO1	ENST00000287667.11	4355	31	307	241	170	-226	multi-exon	FALSE	canonical	1	761	junction_3	328236.0051382135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1144	3435	99	3533	40.0	NA	False	AATATA	-20
PB.8177.1	chr3	-	3485	21	full-splice_match	SFMBT1	ENST00000394752.7	4548	21	25	1038	9	-1038	multi-exon	TRUE	canonical	1	44420	junction_20	24543.198630730672	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	359	2959	10.0	29	True	ATTAAA	-22
PB.869.2	chr1	+	1372	7	full-splice_match	NIT1	ENST00000368009.6	1362	7	-10	0	5	0	multi-exon	FALSE	canonical	1	262503	junction_1	94058.74863158073	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	87	1070	10.0	-14	True	CATAAA	-4
PB.817.13	chr1	+	2594	13	novel_not_in_catalog	LMNA	novel	570	4	NA	NA	0	-8	intron_retention	FALSE	non_canonical	0	0	junction_12	3521306.69046738	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	209	2203	0.0	0	True	AATACA	-14
PB.7582.1	chr22	-	4969	9	novel_not_in_catalog	FRG1FP	novel	749	9	NA	NA	-247	2615	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	178	537	613	1149	20.0	NA	False	NA	NA
PB.7582.3	chr22	-	2462	1	genic	FRG1FP	novel	NA	NA	NA	NA	-259	-19748	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	AATATA	-35
PB.7582.2	chr22	-	2993	8	novel_not_in_catalog	FRG1FP	novel	749	9	NA	NA	-179	-270	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	147	444	541	984	35.0	NA	False	ATTAAA	-16
PB.9002.29	chr4	-	3234	10	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-180	37279	any annotated donor/acceptor	FALSE	canonical	1	5366	junction_1	51743.03545835367	NA	5	NA	TRUE	NA	NA	NA	B	coding	194	585	536	1120	75.0	-16	True	AATAAA	-6
PB.8787.11	chr4	+	2109	10	incomplete-splice_match	EXOC1	ENST00000349598.6	3248	18	24147	27	-4841	0	5prime_fragment	FALSE	canonical	1	190754	junction_2	60890.924243354006	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	131	1597	50.0	NA	False	AATAAA	-17
PB.6140.1	chr19	+	1482	7	full-splice_match	RCN3	ENST00000270645.7	1859	7	377	0	-295	0	multi-exon	FALSE	canonical	1	312748	junction_2	66785.73600307346	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	74	1057	0.0	-8319	False	AATAAA	-20
PB.10107.3	chr6	+	5226	16	full-splice_match	ANKRD6	ENST00000339746.8	3073	16	-53	-2100	-14	29	multi-exon	FALSE	canonical	1	15357	junction_1	18528.967744828336	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	364	2547	15.0	4	True	AATAAA	-22
PB.10107.2	chr6	+	3054	16	full-splice_match	ANKRD6	ENST00000339746.8	3073	16	-62	81	-23	2	multi-exon	FALSE	canonical	1	15357	junction_1	18528.967744828336	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	373	2556	30.0	-5	True	AATAAA	-19
PB.10107.1	chr6	+	5385	16	full-splice_match	ANKRD6	ENST00000339746.8	3073	16	-64	-2248	-25	-3	multi-exon	FALSE	canonical	1	15357	junction_1	18528.967744828336	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	375	2558	30.0	-7	True	ATTAAA	-45
PB.8462.10	chr3	-	1085	5	full-splice_match	COMMD2	ENST00000473414.5	3706	5	9	2612	-1	308	multi-exon	FALSE	canonical	1	232661	junction_4	82845.13778845141	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	47	646	75.0	-2	True	NA	NA
PB.3157.9	chr13	-	2814	1	novel_in_catalog	MED4	novel	931	7	NA	NA	-1	-15121	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-2	True	NA	NA
PB.10817.11	chr7	-	2789	18	novel_in_catalog	POT1	novel	587	4	NA	NA	-12	338	combination_of_known_junctions	FALSE	canonical	1	29025	junction_12	58576.18734581757	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	834	2345	35.0	26	True	AATAAA	-21
PB.10817.10	chr7	-	2939	20	novel_in_catalog	POT1	novel	587	4	NA	NA	-31	338	combination_of_known_junctions	FALSE	canonical	1	4950	junction_15	66670.36564930204	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	984	2495	35.0	-34	True	AATAAA	-21
PB.10817.13	chr7	-	2524	19	full-splice_match	POT1	ENST00000357628.7	4080	19	20	1536	-17	40	multi-exon	FALSE	canonical	1	63406	junction_18	42102.0198845379	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	580	2484	10.0	21	True	CATAAA	-13
PB.10817.12	chr7	-	2384	18	novel_in_catalog	POT1	novel	587	4	NA	NA	-5	46	combination_of_known_junctions	FALSE	canonical	1	29025	junction_12	58576.18734581757	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	827	2338	5.0	33	True	CATAAA	-19
PB.9084.1	chr4	+	4832	31	novel_not_in_catalog	TRAPPC11	novel	4552	30	NA	NA	10	-1	intron_retention	TRUE	canonical	1	2659	junction_1	68016.89563921271	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	485	3886	10.0	-110	False	AATAAA	-17
PB.11854.5	chr9	+	1890	9	full-splice_match	EXOSC2	ENST00000372358.9	2040	9	51	99	-3	-99	multi-exon	FALSE	canonical	1	333224	junction_6	124779.55120306171	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	21	902	30.0	-8	True	GATAAA	-42
PB.1886.30	chr11	+	4428	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	154	-1144	35	452	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	58	2187	10.0	5	True	NA	NA
PB.12143.1	chrX	+	1958	5	full-splice_match	JPX	ENST00000602938.5	581	5	0	-1377	0	0	multi-exon	FALSE	canonical	1	26083	junction_3	129270.71631754038	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-2	True	NA	NA
PB.9084.2	chr4	+	3801	30	full-splice_match	TRAPPC11	ENST00000334690.10	4552	30	22	729	22	-6	multi-exon	FALSE	canonical	1	70740	junction_1	49169.32407278017	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	181	3582	40.0	-8	True	AATAAA	-25
PB.9781.2	chr6	+	1917	1	antisense	novelGene_C6orf62_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-4445	False	NA	NA
PB.9781.1	chr6	+	1828	3	antisense	novelGene_C6orf62_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-8278	False	NA	NA
PB.9777.9	chr6	+	3299	11	novel_not_in_catalog	MRS2	novel	3980	12	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	14390	junction_9	105534.82447590464	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	109	1281	45.0	3	True	AATAAA	-13
PB.9777.8	chr6	+	2200	11	full-splice_match	MRS2	ENST00000378386.7	3313	11	-16	1129	-16	977	multi-exon	FALSE	canonical	1	161085	junction_6	76623.27295384869	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	110	1441	55.0	2	True	TTTAAA	-34
PB.344.4	chr1	+	1564	2	full-splice_match	ZNF691	ENST00000372508.7	1577	2	9	4	-8	0	multi-exon	FALSE	canonical	1	21459	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	50	904	35.0	4	True	AGTAAA	-12
PB.9777.5	chr6	+	3170	11	full-splice_match	MRS2	ENST00000378386.7	3313	11	-19	162	-19	-162	multi-exon	FALSE	canonical	1	161085	junction_6	76623.27295384869	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	113	1444	35.0	-1	True	AATAAA	-16
PB.9777.4	chr6	+	3944	11	full-splice_match	MRS2	ENST00000378386.7	3313	11	-19	-612	-19	0	multi-exon	FALSE	canonical	1	161085	junction_6	76623.27295384869	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	113	1444	25.0	-1	True	AATAAA	-22
PB.9777.7	chr6	+	2013	11	full-splice_match	MRS2	ENST00000378386.7	3313	11	-18	1318	-18	788	multi-exon	FALSE	canonical	1	161085	junction_6	76623.27295384869	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	112	1443	25.0	0	True	AATAAA	-21
PB.9777.6	chr6	+	1759	10	full-splice_match	MRS2	ENST00000378353.5	1740	10	-19	0	-19	0	multi-exon	FALSE	canonical	1	161085	junction_6	80685.36680491974	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	113	1339	20.0	-1	True	AATAAA	-15
PB.9777.1	chr6	+	3193	9	full-splice_match	MRS2	ENST00000274747.11	3821	9	16	612	16	0	multi-exon	FALSE	canonical	1	8282	junction_2	113875.94784121173	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	124	1305	40.0	-12	True	AATAAA	-14
PB.9777.3	chr6	+	3354	11	novel_not_in_catalog	MRS2	novel	3980	12	NA	NA	21	-1	any annotated donor/acceptor	FALSE	canonical	1	26838	junction_5	103289.60966796224	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	119	766	45.0	-7	True	AATAAA	-13
PB.9777.2	chr6	+	2037	11	novel_not_in_catalog	MRS2	novel	3980	12	NA	NA	19	786	any annotated donor/acceptor	TRUE	canonical	1	26838	junction_5	103289.60966796224	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	121	768	30.0	-9	True	AATAAA	-19
PB.4788.4	chr17	+	2187	6	novel_in_catalog	PIGL	novel	671	3	NA	NA	0	-12	intron_retention	FALSE	canonical	1	79896	junction_4	24952.048986806676	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	1488	1838	45.0	0	True	CATAAA	-19
PB.4788.5	chr17	+	2152	7	novel_not_in_catalog	PIGL	novel	671	3	NA	NA	0	-165	intron_retention	FALSE	canonical	1	13084	junction_2	50327.57930603811	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	1606	1956	55.0	0	True	GGGGCT	-45
PB.9006.1	chr4	+	1956	2	full-splice_match	AC139713.2	ENST00000514475.1	766	2	-223	-967	0	17	multi-exon	FALSE	canonical	1	6087	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	141	426	238	663	5.0	15	True	NA	NA
PB.4788.1	chr17	+	2734	7	full-splice_match	PIGL	ENST00000225609.9	1137	7	3	-1600	3	1448	multi-exon	FALSE	canonical	1	43100	junction_5	32919.4576930659	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	15	773	50.0	3	True	NA	NA
PB.4788.2	chr17	+	3855	6	novel_in_catalog	PIGL	novel	671	3	NA	NA	0	1504	intron_retention	FALSE	canonical	1	79896	junction_4	24952.048986806676	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	18	602	20.0	0	True	AATGAA	-14
PB.4788.3	chr17	+	2315	7	novel_not_in_catalog	PIGL	novel	671	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	13084	junction_2	50327.57930603811	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	1606	1956	30.0	0	True	CATAAA	-29
PB.7717.1	chr22	+	1541	9	full-splice_match	DRG1	ENST00000331457.8	1746	9	72	133	-15	-133	multi-exon	FALSE	canonical	1	214643	junction_8	310437.0555871341	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	90	1193	20.0	-9	True	GATAAA	-16
PB.344.1	chr1	+	1888	4	full-splice_match	ZNF691	ENST00000372502.5	1910	4	22	0	-14	0	multi-exon	FALSE	canonical	1	17144	junction_2	8403.43141553232	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	314	1228	35.0	-19	True	AGTAAA	-12
PB.7717.2	chr22	+	1401	9	full-splice_match	DRG1	ENST00000331457.8	1746	9	83	262	-4	35	multi-exon	FALSE	canonical	1	214643	junction_8	310437.0555871341	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	79	1182	25.0	2	True	CATAAA	-34
PB.7112.13	chr2	+	4699	13	incomplete-splice_match	FARP2	ENST00000627550.2	2122	18	0	21058	0	-2429	3prime_fragment	FALSE	canonical	1	74353	junction_1	25126.277559006274	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	125	2512	25.0	4	True	AATAAA	-37
PB.7909.20	chr3	+	4153	2	novel_not_in_catalog	EDEM1	novel	6146	12	NA	NA	19069	7	any annotated donor/acceptor	FALSE	canonical	1	7874	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4198	False	ATTAAA	-23
PB.5549.1	chr19	+	3073	14	full-splice_match	PTBP1	ENST00000349038.8	3155	14	-9	91	-9	-1	multi-exon	FALSE	canonical	1	489152	junction_8	728484.7195485733	NA	6	NA	TRUE	NA	NA	NA	C	coding	531	1596	83	1678	5.0	1	True	ATTAAA	-17
PB.1051.23	chr1	+	4647	20	full-splice_match	ZC3H11A	ENST00000367212.7	3004	20	-63	-1580	-18	-24	multi-exon	FALSE	canonical	1	7347	junction_1	192727.6155120301	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	604	3036	35.0	13	True	TTTAAA	-18
PB.344.2	chr1	+	2074	1	novel_in_catalog	ZNF691	novel	1910	4	NA	NA	-13	-2595	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	46	141	158	298	90.0	-18	True	NA	NA
PB.2418.10	chr12	-	2801	15	novel_in_catalog	NOP2	novel	2613	15	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	182886.33221434653	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	123	1742	20.0	-34	True	AATACA	-15
PB.6882.9	chr2	+	3647	14	incomplete-splice_match	ITPRID2	ENST00000320370.11	4965	17	11	10890	11	473	3prime_fragment	FALSE	canonical	1	410070	junction_11	99514.78289422736	NA	8	NA	TRUE	NA	NA	NA	C	coding	1069	3210	102	3311	20.0	11	True	AATAAA	-15
PB.10392.3	chr7	-	1945	2	full-splice_match	FAM220A	ENST00000616824.1	2211	2	-8	274	8	-274	multi-exon	FALSE	canonical	1	69004	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	477	1256	40.0	-1	True	AAAAAG	-42
PB.10392.2	chr7	-	2319	2	novel_not_in_catalog	FAM220A	novel	2214	2	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	4942	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	578	1357	10.0	-1	True	AATAAA	-35
PB.10392.1	chr7	-	2203	2	full-splice_match	FAM220A	ENST00000616824.1	2211	2	9	-1	9	1	multi-exon	FALSE	canonical	1	69004	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	460	1239	5.0	16	True	AATAAA	-37
PB.6882.8	chr2	+	5077	18	novel_in_catalog	ITPRID2	novel	2526	2	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	67085	junction_15	175308.38231780537	NA	1	NA	TRUE	NA	NA	NA	C	coding	1255	3768	122	3889	20.0	-9	True	AATAAA	-16
PB.12125.1	chrX	-	3328	7	full-splice_match	PDZD11	ENST00000239666.8	1043	7	69	-2354	3	2354	multi-exon	TRUE	canonical	1	111669	junction_3	185955.1886118445	NA	3	NA	TRUE	NA	NA	NA	C	coding	140	423	65	487	80.0	16	True	NA	NA
PB.8382.2	chr3	+	2782	6	novel_not_in_catalog	RAB7A	novel	2244	6	NA	NA	-33	10967	any annotated donor/acceptor	FALSE	canonical	1	4852	junction_5	1164714.204030053	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	209	862	45.0	-23	True	NA	NA
PB.12125.2	chrX	-	1048	8	full-splice_match	PDZD11	ENST00000374454.1	784	8	27	-291	-5	-6	multi-exon	FALSE	canonical	1	98068	junction_6	175378.1114138878	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	145	567	35.0	8	True	AGTAAA	-12
PB.2517.23	chr12	-	2077	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	0	-444	no_combination_of_known_junctions	FALSE	canonical	1	11941	junction_6	243720.69655794522	NA	2	NA	TRUE	NA	NA	NA	C	coding	263	792	217	1008	15.0	-1	True	ATTAAA	-38
PB.2517.22	chr12	-	2138	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	5	-444	combination_of_known_junctions	FALSE	canonical	1	13658	junction_5	256967.882874806	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	187	1812	15.0	29	True	ATTAAA	-38
PB.2517.21	chr12	-	2355	13	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	4	-444	combination_of_known_junctions	FALSE	canonical	1	13346	junction_7	291819.5418196549	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	213	1145	15.0	3	True	ATTAAA	-38
PB.2517.20	chr12	-	1989	10	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	-2	430	combination_of_known_junctions	FALSE	canonical	1	20970	junction_2	263393.11131369055	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	229	1320	65.0	-13	True	ATTAAA	-11
PB.2517.27	chr12	-	2152	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	4	-445	no_combination_of_known_junctions	FALSE	canonical	1	25046	junction_2	249598.26718326792	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	213	1457	15.0	3	True	ATTAAA	-37
PB.2517.26	chr12	-	2173	12	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	2	430	combination_of_known_junctions	FALSE	canonical	1	4266	junction_10	248172.53283492613	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	789	1874	65.0	26	True	ATTAAA	-11
PB.2517.25	chr12	-	1927	10	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	-3	-444	combination_of_known_junctions	FALSE	canonical	1	12207	junction_9	258315.36698819703	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	195	1601	15.0	21	True	ATTAAA	-38
PB.2517.24	chr12	-	2064	13	novel_not_in_catalog	TM7SF3	novel	2709	12	NA	NA	0	-444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	239382.7622238279	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	26	1738	15.0	-1	True	ATTAAA	-38
PB.10484.11	chr7	+	2376	14	novel_not_in_catalog	SEPT7	novel	509	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	21	junction_2	491270.49892083794	NA	9	1	TRUE	NA	NA	NA	C	coding	384	1155	211	1365	25.0	-1	True	AATAAA	-14
PB.10484.10	chr7	+	3260	13	full-splice_match	SEPT7	ENST00000399034.7	4399	13	286	853	0	-853	multi-exon	FALSE	canonical	1	60805	junction_1	462118.9043617153	NA	3	1	TRUE	NA	NA	NA	C	coding	384	1155	147	1301	45.0	-1	True	AATAAA	-31
PB.2517.29	chr12	-	2199	12	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	27	430	combination_of_known_junctions	FALSE	canonical	1	3413	junction_11	239772.41062810627	NA	2	NA	TRUE	NA	NA	NA	C	coding	549	1650	251	1900	65.0	1396	False	ATTAAA	-11
PB.2517.28	chr12	-	2316	12	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	2	430	combination_of_known_junctions	FALSE	canonical	1	11171	junction_10	246518.39146430587	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	215	2017	65.0	1	True	ATTAAA	-11
PB.10484.15	chr7	+	2384	14	full-splice_match	SEPT7	ENST00000635175.1	1464	14	0	-920	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	486600.6310844277	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	218	1372	30.0	0	True	AATAAA	-15
PB.10484.14	chr7	+	1260	12	incomplete-splice_match	SEPT7	ENST00000399034.7	4399	13	287	3890	0	26	3prime_fragment	FALSE	canonical	1	60805	junction_1	481010.9346821735	NA	1	1	TRUE	NA	NA	NA	C	coding	371	1113	146	1258	40.0	0	True	NA	NA
PB.10484.17	chr7	+	1657	13	full-splice_match	SEPT7	ENST00000399034.7	4399	13	287	2455	0	150	multi-exon	FALSE	canonical	1	60805	junction_1	462118.9043617153	NA	1	1	TRUE	NA	NA	NA	C	coding	384	1155	146	1300	40.0	0	True	AATAAA	-22
PB.10484.16	chr7	+	2274	13	novel_not_in_catalog	SEPT7	novel	509	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	732	junction_2	338793.83390369825	NA	3	1	TRUE	NA	NA	NA	C	coding	285	858	406	1263	25.0	0	True	AATAAA	-14
PB.3490.1	chr14	-	3200	4	full-splice_match	WDR89	ENST00000554717.1	976	4	0	-2224	0	0	multi-exon	FALSE	canonical	1	3085	junction_3	33176.82534876148	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	297	1460	15.0	17	True	NA	NA
PB.6882.3	chr2	+	4981	17	full-splice_match	ITPRID2	ENST00000320370.11	4965	17	-19	3	-19	-3	multi-exon	FALSE	canonical	1	46131	junction_16	160714.35859541106	NA	0	NA	TRUE	NA	NA	NA	C	coding	1256	3771	132	3902	20.0	-19	True	AATAAA	-16
PB.3490.3	chr14	-	3108	3	novel_in_catalog	WDR89	novel	2993	2	NA	NA	-10	0	intron_retention	FALSE	canonical	1	62107	junction_2	8931.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	206	1369	20.0	-1	True	NA	NA
PB.1057.7	chr1	+	3759	10	full-splice_match	MDM4	ENST00000454264.6	9926	10	27	6140	0	-2221	multi-exon	FALSE	canonical	1	21789	junction_8	89563.31481260741	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	140	1462	100.0	-3	True	NA	NA
PB.3490.5	chr14	-	2657	3	novel_in_catalog	WDR89	novel	2993	2	NA	NA	-12	-453	intron_retention	FALSE	canonical	1	62107	junction_2	8931.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	208	1371	60.0	-3	True	NA	NA
PB.3490.4	chr14	-	3002	2	full-splice_match	WDR89	ENST00000394942.2	2993	2	-10	1	-10	0	multi-exon	FALSE	canonical	1	761	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	100	1263	20.0	-1	True	NA	NA
PB.3490.7	chr14	-	2511	3	novel_in_catalog	WDR89	novel	2993	2	NA	NA	-25	-612	intron_retention	FALSE	canonical	1	62107	junction_2	8931.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	221	1384	45.0	8566	False	AATAAA	-13
PB.6882.2	chr2	+	5881	18	full-splice_match	ITPRID2	ENST00000440623.5	5420	18	-464	3	-101	-3	multi-exon	FALSE	canonical	1	49800	junction_11	174468.0861756453	NA	4	NA	TRUE	NA	NA	NA	C	coding	930	2793	336	3128	20.0	2	True	AATAAA	-16
PB.3490.9	chr14	-	1711	3	novel_in_catalog	WDR89	novel	2993	2	NA	NA	-10	65	intron_retention	FALSE	canonical	1	62107	junction_2	8931.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	206	1369	25.0	-1	True	AATAAA	-23
PB.3490.8	chr14	-	2016	3	novel_in_catalog	WDR89	novel	2993	2	NA	NA	-11	369	intron_retention	FALSE	canonical	1	62107	junction_2	8931.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	207	1370	70.0	-2	True	NA	NA
PB.1057.1	chr1	+	3883	10	full-splice_match	MDM4	ENST00000391947.6	10008	10	-15	6140	-15	-2221	multi-exon	TRUE	canonical	1	67422	junction_5	75930.30010005196	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	182	604	100.0	-5	True	NA	NA
PB.10169.26	chr6	-	2784	12	incomplete-splice_match	LAMA4	ENST00000389463.8	6297	39	6	62760	6	-4	3prime_fragment	FALSE	canonical	1	174854	junction_11	52902.58159786731	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	278	1879	45.0	127	False	AATAAA	-11
PB.9386.16	chr5	-	4825	7	novel_not_in_catalog	STARD4	novel	4606	6	NA	NA	5	-5	any annotated donor/acceptor	FALSE	canonical	1	6705	junction_2	136378.8461130937	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	156	569	35.0	4	True	AATAAA	-17
PB.6687.13	chr2	-	2712	9	incomplete-splice_match	BUB1	ENST00000465029.5	1999	10	-18	3726	-18	1368	3prime_fragment	FALSE	canonical	1	297598	junction_7	51146.044863581585	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	87	1172	90.0	-19	False	NA	NA
PB.10169.27	chr6	-	1520	10	novel_in_catalog	LAMA4	novel	6547	39	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	9520	junction_1	97416.573241789	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	256	1359	20.0	-6	True	AATAAA	-27
PB.5453.1	chr18	+	2751	15	full-splice_match	MOCOS	ENST00000261326.5	6160	15	-22	3431	-22	1912	multi-exon	FALSE	canonical	1	50409	junction_1	18357.55769792521	NA	1	NA	TRUE	NA	NA	NA	A	coding	888	2667	44	2710	30.0	0	True	CATAAA	-23
PB.5453.2	chr18	+	2772	1	full-splice_match	AC023043.4	ENST00000612081.1	449	1	-2327	4	-2327	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	0	True	AGTAAA	-19
PB.11620.1	chr9	-	2506	14	full-splice_match	FRMD3	ENST00000304195.7	5297	14	16	2775	16	575	multi-exon	FALSE	canonical	1	26970	junction_13	6417.503506382982	NA	0	NA	TRUE	NA	NA	NA	A	coding	583	1752	234	1985	70.0	-43	True	TTTAAA	-42
PB.10169.24	chr6	-	4488	31	incomplete-splice_match	LAMA4	ENST00000230538.11	6547	39	149	20210	6	6855	3prime_fragment	FALSE	canonical	1	109876	junction_24	58127.03155144103	NA	0	NA	TRUE	NA	NA	NA	C	coding	1413	4239	250	4488	65.0	0	True	NA	NA
PB.747.16	chr1	-	3660	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-12	-56	intron_retention	FALSE	canonical	1	6497	junction_9	188861.87590204645	NA	19	2	TRUE	NA	NA	NA	C	coding	445	1338	833	2170	35.0	-16	True	NA	NA
PB.9386.13	chr5	-	5356	6	novel_not_in_catalog	STARD4	novel	4606	6	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	28446	junction_1	136605.59083961387	NA	1	1	TRUE	NA	NA	NA	C	coding	159	480	155	634	40.0	-1	True	AATAAA	-18
PB.9694.4	chr6	-	1306	7	full-splice_match	SERPINB1	ENST00000380739.5	2619	7	143	1170	-1	10	multi-exon	FALSE	canonical	1	766552	junction_6	274852.55555479194	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	61	1200	30.0	-4	True	AATAAA	-13
PB.9694.1	chr6	-	2709	7	novel_in_catalog	SERPINB1	novel	2619	7	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	16983	junction_6	513842.77749794786	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	295	1434	15.0	118	False	NA	NA
PB.9694.3	chr6	-	1811	7	full-splice_match	SERPINB1	ENST00000380739.5	2619	7	116	692	-28	488	multi-exon	FALSE	canonical	1	766552	junction_6	274852.55555479194	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	88	1227	5.0	110	False	ATTAAA	-22
PB.9694.2	chr6	-	2522	7	full-splice_match	SERPINB1	ENST00000380739.5	2619	7	95	2	48	-2	multi-exon	FALSE	canonical	1	766552	junction_6	274852.55555479194	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	109	1248	15.0	89	False	NA	NA
PB.1702.5	chr10	-	2735	1	novel_in_catalog	AC068896.1	novel	3422	10	NA	NA	169699	-2214	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	109	330	748	1077	15.0	4972	False	AATAAA	-20
PB.1702.4	chr10	-	5451	4	novel_in_catalog	AC068896.1	novel	3422	10	NA	NA	47600	-2214	no_combination_of_known_junctions	FALSE	canonical	1	31537	junction_2	69132.11541357284	NA	1	NA	TRUE	NA	NA	NA	B	coding	300	903	601	1503	15.0	7	True	AATAAA	-20
PB.1702.7	chr10	-	3577	7	full-splice_match	EEF1AKMT2	ENST00000368836.6	1462	7	7	-2122	5	-1	multi-exon	FALSE	canonical	1	106578	junction_2	52886.113422302704	NA	3	NA	TRUE	NA	NA	NA	C	coding	291	876	31	906	35.0	10	True	ACTAAA	-18
PB.1702.6	chr10	-	3711	6	incomplete-splice_match	AC068896.1	ENST00000494792.1	3422	10	-160	140383	-160	-140383	3prime_fragment	FALSE	canonical	1	144596	junction_3	39377.843643348475	NA	2	NA	TRUE	NA	NA	NA	B	coding	236	711	55	765	20.0	-14	True	AAGAAA	-20
PB.1702.1	chr10	-	5757	5	full-splice_match	FAM53B	ENST00000337318.7	5431	5	-328	2	-109	-2	multi-exon	FALSE	canonical	1	50940	junction_4	61237.930159236275	NA	1	NA	TRUE	NA	NA	NA	A	coding	422	1269	541	1809	15.0	-1	True	AATAAA	-20
PB.1702.3	chr10	-	6168	10	novel_in_catalog	AC068896.1	novel	3422	10	NA	NA	-149	-2214	no_combination_of_known_junctions	FALSE	canonical	1	18272	junction_4	66694.00816739161	NA	4	NA	TRUE	NA	NA	NA	B	coding	422	1269	952	2220	15.0	-3	True	AATAAA	-20
PB.2750.1	chr12	+	2284	5	full-splice_match	SLC35E3	ENST00000398004.3	17791	5	111	15396	111	-1174	multi-exon	FALSE	canonical	1	100959	junction_1	23743.4313179456	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	162	1103	40.0	-2	True	AATAAA	-22
PB.1057.8	chr1	+	2949	2	incomplete-splice_match	MDM4	ENST00000444261.1	513	3	4006	-2590	4006	-2222	5prime_fragment	FALSE	canonical	1	339101	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	81	246	408	653	95.0	-4697	False	NA	NA
PB.2750.3	chr12	+	2908	6	novel_not_in_catalog	SLC35E3	novel	17791	5	NA	NA	62	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	56841.606502279654	NA	4	1	TRUE	NA	NA	NA	C	coding	313	942	211	1152	25.0	-8	True	AATAAA	-17
PB.2750.2	chr12	+	3177	6	novel_not_in_catalog	SLC35E3	novel	17791	5	NA	NA	61	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	56841.606502279654	NA	3	NA	TRUE	NA	NA	NA	C	coding	313	942	212	1153	30.0	-9	True	AATAAA	-16
PB.1702.9	chr10	-	3320	6	incomplete-splice_match	AC068896.1	ENST00000494792.1	3422	10	-148	140762	-148	-140762	3prime_fragment	FALSE	canonical	1	144596	junction_3	39377.843643348475	NA	3	NA	TRUE	NA	NA	NA	B	coding	236	711	43	753	55.0	-2	True	ACTAAA	-8
PB.2750.4	chr12	+	1507	6	novel_not_in_catalog	SLC35E3	novel	17791	5	NA	NA	70	-762	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	56841.606502279654	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	203	1144	85.0	0	True	NA	NA
PB.7502.7	chr21	-	2147	10	full-splice_match	DONSON	ENST00000303071.9	2170	10	22	1	-16	-1	multi-exon	FALSE	canonical	1	88776	junction_9	61995.521139498655	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	46	1746	20.0	-11	True	AATAAA	-15
PB.7502.6	chr21	-	1975	9	novel_in_catalog	DONSON	novel	528	4	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	1	33943	junction_5	90109.61492503172	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	973	1572	20.0	-16	True	AATAAA	-17
PB.9847.3	chr6	-	2267	12	full-splice_match	GNL1	ENST00000376621.7	7490	12	634	4589	-452	519	multi-exon	FALSE	canonical	1	444381	junction_8	111104.33601174875	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	338	2161	25.0	690	False	AATAAA	-15
PB.3149.9	chr13	-	5752	19	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	5	-1983	combination_of_known_junctions	FALSE	canonical	1	43285	junction_18	114357.93656772484	NA	1	NA	TRUE	NA	NA	NA	B	coding	1668	5007	67	5073	15.0	-27	True	AATAAA	-16
PB.1149.1	chr1	+	1698	3	full-splice_match	DEGS1	ENST00000323699.8	2101	3	67	336	-28	-52	multi-exon	FALSE	canonical	1	684602	junction_1	464576.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	100	1071	30.0	-2	True	NA	NA
PB.11270.5	chr8	-	4278	10	full-splice_match	RNF19A	ENST00000341084.6	4285	10	281	-274	102	-8	multi-exon	FALSE	canonical	1	178962	junction_9	102818.61271838546	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	367	2790	5.0	3410	False	AATAAA	-16
PB.8492.6	chr3	+	3014	8	novel_in_catalog	MLF1	novel	787	6	NA	NA	0	-22	combination_of_known_junctions	FALSE	canonical	1	13137	junction_1	107043.10239166583	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	255	986	100.0	1	True	NA	NA
PB.487.11	chr1	-	2475	21	novel_in_catalog	FUBP1	novel	612	5	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	1	72308	junction_19	432436.8916259227	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	107	2104	25.0	-1	True	AATAAA	-25
PB.9847.1	chr6	-	2473	12	novel_not_in_catalog	GNL1	novel	7490	12	NA	NA	-169	12352	any annotated donor/acceptor	FALSE	canonical	1	1872	junction_1	211347.17517041098	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	55	1782	75.0	-2	True	NA	NA
PB.9784.12	chr6	-	2625	14	full-splice_match	RIPOR2	ENST00000645100.1	2704	14	-74	153	30	-138	multi-exon	FALSE	canonical	1	137226	junction_9	108351.33502540235	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	125	2053	70.0	718	False	NA	NA
PB.9784.10	chr6	-	2739	14	full-splice_match	RIPOR2	ENST00000645100.1	2704	14	-24	-11	-24	11	multi-exon	FALSE	canonical	1	137226	junction_9	108351.33502540235	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	75	2003	100.0	768	False	NA	NA
PB.8492.4	chr3	+	2212	7	full-splice_match	MLF1	ENST00000359117.9	2222	7	8	2	1	-2	multi-exon	FALSE	canonical	1	54902	junction_1	81423.22110361939	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	229	960	35.0	-2	True	AATAAA	-14
PB.11854.3	chr9	+	1907	8	full-splice_match	EXOSC2	ENST00000546165.5	1956	8	11	38	-4	-5	multi-exon	FALSE	canonical	1	13845	junction_5	209936.42004596128	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	22	825	35.0	-9	True	GATAAA	-22
PB.1287.4	chr10	+	2299	3	incomplete-splice_match	TAF3	ENST00000344293.5	4872	7	1	51023	1	-51023	3prime_fragment	FALSE	canonical	1	87034	junction_1	7597.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	698	2094	206	2299	75.0	-15	True	NA	NA
PB.1287.1	chr10	+	1797	3	incomplete-splice_match	TAF3	ENST00000344293.5	4872	7	2	51524	2	-51524	3prime_fragment	FALSE	canonical	1	87034	junction_1	7597.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	531	1593	205	1797	80.0	-14	True	NA	NA
PB.1149.6	chr1	+	2020	3	novel_in_catalog	DEGS1	novel	957	3	NA	NA	-20	-10	intron_retention	FALSE	canonical	1	5100	junction_1	804327.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	204	1067	30.0	-6057	False	AATAAA	-18
PB.1287.3	chr10	+	2405	3	incomplete-splice_match	TAF3	ENST00000344293.5	4872	7	1	50917	1	-50917	3prime_fragment	FALSE	canonical	1	87034	junction_1	7597.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	733	2199	206	2404	65.0	-15	True	NA	NA
PB.1287.2	chr10	+	2053	3	incomplete-splice_match	TAF3	ENST00000344293.5	4872	7	1	51269	1	-51269	3prime_fragment	FALSE	canonical	1	87034	junction_1	7597.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	616	1848	206	2053	65.0	-15	True	NA	NA
PB.9289.3	chr5	+	1101	6	full-splice_match	BTF3	ENST00000380591.7	1237	6	-6	142	1	0	multi-exon	FALSE	canonical	1	542628	junction_1	1721616.7506465542	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	373	846	25.0	0	True	AATAAA	-14
PB.11185.13	chr8	-	4389	14	novel_not_in_catalog	STAU2	novel	2646	12	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	40	junction_10	101835.67009636815	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	388	1992	45.0	580	False	AGTAAA	-18
PB.8402.7	chr3	-	1657	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	59	-10	27	10	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	90	1136	20.0	60	False	AATAAA	-24
PB.11854.2	chr9	+	2000	9	full-splice_match	EXOSC2	ENST00000372358.9	2040	9	44	-4	5	4	multi-exon	FALSE	canonical	1	333224	junction_6	124779.55120306171	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	28	909	20.0	-15	True	GATAAA	-31
PB.3699.1	chr14	-	1930	7	novel_in_catalog	AHNAK2	novel	18335	6	NA	NA	-3	42	combination_of_known_junctions	FALSE	canonical	1	28253	junction_6	28181.35169260379	NA	4	NA	TRUE	NA	NA	NA	B	coding	552	1656	275	1930	60.0	22	True	AATACA	-11
PB.11270.7	chr8	-	3157	8	novel_not_in_catalog	RNF19A	novel	4330	11	NA	NA	-1724	0	any annotated donor/acceptor	FALSE	canonical	1	56	junction_7	165969.95342223722	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	75	1661	20.0	-1963	False	AATAAA	-24
PB.8402.3	chr3	-	2673	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	-2	-965	-2	965	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	151	1197	25.0	-1	True	AGTAAA	-18
PB.9289.2	chr5	+	862	6	full-splice_match	BTF3	ENST00000335895.12	897	6	34	1	0	1	multi-exon	FALSE	canonical	1	2236825	junction_5	1562459.949643433	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	118	606	25.0	-1	True	AATAAA	-15
PB.11630.4	chr9	-	2020	5	novel_not_in_catalog	ISCA1	novel	1958	4	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	2335	junction_2	8975.076392432546	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	81	416	35.0	-1	True	ATTAAA	-24
PB.8402.2	chr3	-	3520	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	-17	-1797	-3	1797	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	166	1212	25.0	-16	True	NA	NA
PB.9289.1	chr5	+	3728	1	novel_in_catalog	BTF3	novel	897	6	NA	NA	0	-527	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-12	True	NA	NA
PB.2471.1	chr12	-	6162	23	full-splice_match	LRP6	ENST00000261349.8	10020	23	-227	4085	-27	937	multi-exon	FALSE	canonical	1	86467	junction_22	37041.99494018593	NA	0	NA	TRUE	NA	NA	NA	C	coding	1613	4842	305	5146	20.0	-21	True	ATTAAA	-12
PB.2471.3	chr12	-	5388	23	full-splice_match	LRP6	ENST00000261349.8	10020	23	-100	4732	100	290	multi-exon	FALSE	canonical	1	86467	junction_22	37041.99494018593	NA	4	NA	TRUE	NA	NA	NA	C	coding	1613	4842	178	5019	75.0	273	False	AATAAA	-40
PB.2471.2	chr12	-	5632	23	full-splice_match	LRP6	ENST00000261349.8	10020	23	-231	4619	-31	403	multi-exon	FALSE	canonical	1	86467	junction_22	37041.99494018593	NA	0	NA	TRUE	NA	NA	NA	C	coding	1613	4842	309	5150	65.0	-25	True	NA	NA
PB.2471.4	chr12	-	5361	23	full-splice_match	LRP6	ENST00000261349.8	10020	23	-216	4875	-16	147	multi-exon	FALSE	canonical	1	86467	junction_22	37041.99494018593	NA	1	NA	TRUE	NA	NA	NA	C	coding	1613	4842	294	5135	60.0	-10	True	CATAAA	-9
PB.6725.2	chr2	-	2050	15	full-splice_match	BIN1	ENST00000393040.7	2293	15	198	45	-89	-34	multi-exon	FALSE	canonical	1	109537	junction_4	405460.6346355478	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	148	1596	80.0	-9	True	AATAAA	-12
PB.2671.6	chr12	-	3721	28	novel_in_catalog	AC073896.4	novel	403	2	NA	NA	746	-986	no_combination_of_known_junctions	FALSE	canonical	1	134601	junction_1	187734.73801122332	NA	0	NA	TRUE	NA	NA	NA	B	coding	1099	3300	78	3377	90.0	756	False	NA	NA
PB.2671.5	chr12	-	3761	29	full-splice_match	SMARCC2	ENST00000347471.8	3839	29	63	15	-2	0	multi-exon	FALSE	canonical	1	134601	junction_1	218133.47230117413	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	25	3417	90.0	-13	True	NA	NA
PB.2671.4	chr12	-	3738	29	novel_in_catalog	AC073896.4	novel	403	2	NA	NA	795	-986	no_combination_of_known_junctions	FALSE	canonical	1	40859	junction_2	200793.1755494815	NA	0	NA	TRUE	NA	NA	NA	B	coding	1121	3366	29	3394	90.0	-17	True	NA	NA
PB.2671.3	chr12	-	4014	28	full-splice_match	SMARCC2	ENST00000267064.8	4076	28	62	0	-3	0	multi-exon	FALSE	canonical	1	249118	junction_27	164759.92595901227	NA	0	NA	TRUE	NA	NA	NA	C	coding	1214	3645	26	3670	90.0	-14	True	NA	NA
PB.2671.2	chr12	-	4110	29	full-splice_match	SMARCC2	ENST00000550164.5	4114	29	-13	17	-6	0	multi-exon	FALSE	canonical	1	179516	junction_12	200649.91612942406	NA	0	NA	TRUE	NA	NA	NA	C	coding	1245	3738	29	3766	90.0	-17	True	NA	NA
PB.2671.1	chr12	-	4975	28	full-splice_match	SMARCC2	ENST00000267064.8	4076	28	80	-979	5	617	multi-exon	FALSE	canonical	1	249118	junction_27	164759.92595901227	NA	18	2	TRUE	NA	NA	NA	C	coding	1214	3645	8	3652	15.0	4	True	NA	NA
PB.3410.1	chr14	+	1613	5	novel_in_catalog	LRR1	novel	1745	4	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	1	20832	junction_2	106705.19534299865	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	127	528	15.0	-9554	False	ATTAAA	-16
PB.3410.2	chr14	+	1509	4	full-splice_match	LRR1	ENST00000298288.10	1745	4	235	1	-20	0	multi-exon	FALSE	canonical	1	98286	junction_2	74172.24980783282	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	90	1334	15.0	-17	True	ATTAAA	-16
PB.10422.1	chr7	-	2350	1	antisense	novelGene_ITGB8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	104	315	1762	2076	85.0	6410	False	NA	NA
PB.8314.5	chr3	-	2226	8	novel_in_catalog	B4GALT4	novel	2494	8	NA	NA	1	-7	combination_of_known_junctions	TRUE	canonical	1	6092	junction_7	98744.68288718029	NA	4	1	TRUE	NA	NA	NA	C	coding	246	741	454	1194	30.0	252	False	AATAAA	-34
PB.8314.4	chr3	-	2227	8	full-splice_match	B4GALT4	ENST00000393765.6	2459	8	225	7	0	-7	multi-exon	FALSE	canonical	1	76224	junction_7	59189.86303344828	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	393	1427	30.0	-1	True	AATAAA	-34
PB.7321.2	chr20	+	2003	14	full-splice_match	CTSA	ENST00000372459.6	1972	14	0	-31	0	-3	multi-exon	FALSE	canonical	1	1160711	junction_1	317549.0352972483	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	194	1636	15.0	0	True	ATTAAA	-15
PB.8314.2	chr3	-	2484	8	full-splice_match	B4GALT4	ENST00000483209.5	2494	8	-7	17	-7	-7	multi-exon	FALSE	canonical	1	7985	junction_7	82747.51286847459	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	650	1684	30.0	260	False	AATAAA	-34
PB.8314.1	chr3	-	2319	8	novel_in_catalog	B4GALT4	novel	2494	8	NA	NA	-13	-1	combination_of_known_junctions	TRUE	canonical	1	6092	junction_7	83403.62220710385	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	477	1511	5.0	229	False	AATAAA	-42
PB.7321.1	chr20	+	1833	15	full-splice_match	CTSA	ENST00000646241.2	1858	15	22	3	0	-3	multi-exon	FALSE	canonical	1	746898	junction_1	415158.1325733802	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	24	1466	15.0	2	True	ATTAAA	-15
PB.6333.3	chr2	-	3954	27	full-splice_match	WDR35	ENST00000281405.8	6918	27	-18	2982	-9	0	multi-exon	FALSE	canonical	1	54182	junction_15	19794.55441491945	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	126	3638	45.0	-37	True	AATAAA	-19
PB.8510.6	chr3	+	2086	9	full-splice_match	MYNN	ENST00000356716.8	2833	9	-28	775	-6	-733	multi-exon	FALSE	canonical	1	52573	junction_2	72394.77100322492	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	163	1995	20.0	-6	True	ATTAAA	-15
PB.8691.3	chr4	-	1823	4	full-splice_match	GRPEL1	ENST00000264954.4	2775	4	134	818	1	805	multi-exon	FALSE	canonical	1	669619	junction_3	149817.79858288608	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	32	685	65.0	0	True	AAAAAG	-24
PB.9545.23	chr5	+	4038	21	novel_not_in_catalog	TCERG1	novel	1984	11	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	10948	junction_4	158668.26391575602	NA	4	NA	TRUE	NA	NA	NA	C	coding	1049	3150	24	3173	30.0	-6	True	AATAAA	-17
PB.602.4	chr1	+	3239	21	full-splice_match	STRIP1	ENST00000369795.7	3265	21	8	18	-2	-16	multi-exon	FALSE	canonical	1	149342	junction_1	71426.31245913511	NA	30	3	TRUE	NA	NA	NA	C	coding	837	2514	15	2528	70.0	0	True	NA	NA
PB.602.5	chr1	+	3369	22	novel_not_in_catalog	STRIP1	novel	3125	21	NA	NA	2	-16	any annotated donor/acceptor	FALSE	canonical	1	3748	junction_11	109406.24112533346	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	21	1325	70.0	-6	True	NA	NA
PB.602.2	chr1	+	3024	19	novel_in_catalog	STRIP1	novel	3125	21	NA	NA	-5	-16	no_combination_of_known_junctions	TRUE	canonical	1	9760	junction_15	97541.71802351237	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	28	2313	70.0	-13	True	NA	NA
PB.602.3	chr1	+	3471	20	novel_in_catalog	STRIP1	novel	3125	21	NA	NA	-3	-16	intron_retention	FALSE	canonical	1	149342	junction_1	72893.3159676835	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	26	2083	70.0	-11	True	NA	NA
PB.9545.22	chr5	+	2727	11	full-splice_match	TCERG1	ENST00000507175.5	1984	11	15	-758	-6	456	multi-exon	FALSE	canonical	1	352318	junction_3	46175.54854422414	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1827	25	1851	70.0	-7	True	NA	NA
PB.11759.15	chr9	-	2707	9	full-splice_match	TRAF1	ENST00000540010.1	4303	9	35	1561	35	-1561	multi-exon	FALSE	canonical	1	5492	junction_8	116219.81248344664	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	391	1641	25.0	15	True	AAGAAA	-32
PB.6805.2	chr2	+	1964	2	full-splice_match	TANK	ENST00000463502.1	570	2	-59	-1335	-1	1335	multi-exon	FALSE	canonical	1	152487	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-20	True	NA	NA
PB.9545.20	chr5	+	2305	15	incomplete-splice_match	TCERG1	ENST00000394421.6	3633	21	-7	12376	-7	-4892	3prime_fragment	FALSE	canonical	1	212876	junction_11	101015.77140289752	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2280	26	2305	60.0	-8	True	NA	NA
PB.9614.1	chr5	+	2604	3	novel_not_in_catalog	LINC01366	novel	847	3	NA	NA	-36	1606	any annotated donor/acceptor	FALSE	canonical	1	220	junction_1	2440.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-34	True	NA	NA
PB.9545.27	chr5	+	6613	20	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	352318	junction_3	102693.7709350952	NA	4	NA	TRUE	NA	NA	NA	C	coding	608	1827	20	1846	30.0	-2	True	AATAAA	-15
PB.9545.26	chr5	+	6679	21	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	96933	junction_5	157394.73977515893	NA	2	NA	TRUE	NA	NA	NA	C	coding	629	1890	21	1910	30.0	-3	True	AATAAA	-17
PB.1836.13	chr11	+	1795	2	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	5	-7102	any annotated donor/acceptor	FALSE	canonical	1	18	junction_1	0.0	NA	18	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-9	True	NA	NA
PB.1836.12	chr11	+	1413	5	full-splice_match	C11orf58	ENST00000228136.8	2049	5	302	334	44	-334	multi-exon	FALSE	canonical	1	926149	junction_1	483041.7676063324	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	77	628	20.0	-4	True	AATAAA	-13
PB.1836.11	chr11	+	2144	1	novel_in_catalog	C11orf58	novel	813	4	NA	NA	3	-7406	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-11	True	ATTAAA	-21
PB.1836.10	chr11	+	3086	6	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	3	1219	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	667558.4944475202	NA	3	1	TRUE	NA	NA	NA	C	coding	183	552	133	684	20.0	-11	True	AATAAA	-11
PB.1836.17	chr11	+	3102	6	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	0	1224	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	667558.4944475202	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	122	673	20.0	0	True	AATAAA	-16
PB.1836.16	chr11	+	4742	2	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	0	-4146	any annotated donor/acceptor	FALSE	canonical	1	18	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	C	coding	106	321	2470	2790	85.0	0	True	NA	NA
PB.1836.15	chr11	+	2706	5	full-splice_match	C11orf58	ENST00000228136.8	2049	5	253	-910	-4	252	multi-exon	FALSE	canonical	1	926149	junction_1	483041.7676063324	NA	6	NA	TRUE	NA	NA	NA	C	coding	183	552	126	677	45.0	-4	True	AGTAAA	-41
PB.1836.14	chr11	+	2922	6	novel_in_catalog	C11orf58	novel	813	4	NA	NA	-4	919	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	667558.4944475202	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	126	677	20.0	-4	True	NA	NA
PB.1836.18	chr11	+	3313	6	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	6	1453	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	667558.4944475202	NA	5	NA	TRUE	NA	NA	NA	C	coding	183	552	115	666	25.0	7	True	AGTAAA	-11
PB.6038.2	chr19	-	8115	3	full-splice_match	IRGQ	ENST00000422989.5	9685	3	1	1569	1	-2	multi-exon	FALSE	canonical	1	59253	junction_2	6905.5	NA	4	NA	TRUE	NA	NA	NA	A	coding	623	1872	156	2027	5.0	-1	True	AATAAA	-16
PB.11068.18	chr8	-	3032	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	84	-9	any annotated donor/acceptor	FALSE	canonical	1	108	junction_4	229723.74180632702	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	1643	2554	45.0	2001	False	NA	NA
PB.1357.3	chr10	-	5052	19	full-splice_match	ARHGAP12	ENST00000396144.8	5084	19	-3	35	-3	-2	multi-exon	FALSE	canonical	1	35234	junction_11	65711.76493080206	NA	1	NA	TRUE	NA	NA	NA	C	coding	839	2520	314	2833	20.0	-11	False	AATAAA	-16
PB.2665.1	chr12	+	4598	10	novel_in_catalog	IKZF4	novel	5229	12	NA	NA	-212	0	no_combination_of_known_junctions	FALSE	canonical	1	1759	junction_3	23957.33362551944	NA	0	NA	TRUE	NA	NA	NA	B	coding	483	1452	642	2093	85.0	-58	False	NA	NA
PB.2665.2	chr12	+	4436	9	novel_in_catalog	IKZF4	novel	5229	12	NA	NA	-147	1	combination_of_known_junctions	FALSE	canonical	1	9850	junction_2	20849.45680010333	NA	0	NA	TRUE	NA	NA	NA	B	coding	538	1617	314	1930	85.0	7	True	NA	NA
PB.6285.9	chr2	+	3554	6	novel_in_catalog	ACP1	novel	1552	6	NA	NA	-11	1	intron_retention	FALSE	canonical	1	129469	junction_3	618560.0027103595	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	7	True	AATAAA	-17
PB.1357.7	chr10	-	4031	18	novel_not_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-24	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	75274.1013854306	NA	1	1	TRUE	NA	NA	NA	C	coding	427	1284	273	1556	20.0	-25	True	AATAAA	-32
PB.1357.6	chr10	-	4197	19	full-splice_match	ARHGAP12	ENST00000396144.8	5084	19	-3	890	-3	0	multi-exon	FALSE	canonical	1	35234	junction_11	65711.76493080206	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	314	2833	20.0	-11	False	AATAAA	-32
PB.1357.5	chr10	-	4181	19	novel_not_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-26	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	70336.38600247307	NA	1	1	TRUE	NA	NA	NA	C	coding	474	1425	275	1699	15.0	-27	True	AATAAA	-39
PB.1357.4	chr10	-	4098	18	full-splice_match	ARHGAP12	ENST00000375250.9	4914	18	-34	850	28	4	multi-exon	FALSE	canonical	1	43396	junction_11	66412.20392320763	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	283	2727	15.0	20	False	AATAAA	-39
PB.1357.9	chr10	-	3940	17	novel_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	43396	junction_11	71822.8646262532	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	273	2576	20.0	-25	True	AATAAA	-32
PB.1357.8	chr10	-	3998	18	novel_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	35234	junction_11	70776.18684514659	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	256	2634	20.0	-8	True	AATAAA	-32
PB.9545.29	chr5	+	4210	22	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	102408	junction_20	158211.95814533555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	18	3053	30.0	0	True	AATAAA	-17
PB.11411.1	chr8	-	1939	6	full-splice_match	ZNF34	ENST00000429371.6	1926	6	-13	0	7	0	multi-exon	FALSE	canonical	1	29329	junction_5	11154.012415270121	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	168	1787	20.0	6202	False	ATTAAA	-25
PB.6805.8	chr2	+	1627	8	full-splice_match	TANK	ENST00000259075.6	2152	8	55	470	-3	69	multi-exon	FALSE	canonical	1	152487	junction_1	145698.9565673561	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	151	1428	85.0	0	True	TTTAAA	-35
PB.9545.28	chr5	+	7217	22	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	1	-7	intron_retention	FALSE	canonical	1	96933	junction_5	184339.68986722495	NA	7	NA	TRUE	NA	NA	NA	C	coding	629	1890	18	1907	55.0	0	True	AATAAA	-7
PB.11411.2	chr8	-	2041	7	novel_not_in_catalog	ZNF34	novel	1901	6	NA	NA	1505	2	any annotated donor/acceptor	TRUE	canonical	1	376	junction_6	23959.825977850694	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	274	1893	35.0	7741	False	ATTAAA	-21
PB.6805.9	chr2	+	2038	8	full-splice_match	TANK	ENST00000392749.6	2171	8	131	2	0	-2	multi-exon	FALSE	canonical	1	288058	junction_1	105194.08182895431	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	109	1386	20.0	0	True	ATTAAA	-11
PB.6320.23	chr2	+	2405	1	incomplete-splice_match	TRIB2	ENST00000155926.8	4391	3	23437	4	22088	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	101	306	164	469	40.0	-2214	False	AATAAA	-18
PB.10186.10	chr6	+	4906	1	novel_in_catalog	PLN	novel	2001	2	NA	NA	9	-7518	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	9	True	ATTAAA	-19
PB.11270.2	chr8	-	4206	9	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	29	-9	intron_retention	FALSE	canonical	1	7391	junction_1	140715.12992428843	NA	1	NA	TRUE	NA	NA	NA	C	coding	759	2280	440	2719	5.0	3337	False	AATAAA	-15
PB.9961.1	chr6	-	1520	4	full-splice_match	PPIL1	ENST00000373699.5	1739	4	214	5	214	-5	multi-exon	FALSE	canonical	1	393357	junction_3	7744.1815721367375	NA	0	NA	TRUE	NA	NA	NA	A	coding	166	501	39	539	20.0	-15	True	AATAAA	-17
PB.4727.1	chr17	+	1247	6	full-splice_match	EIF5A	ENST00000336458.12	1511	6	262	2	4	-2	multi-exon	FALSE	canonical	1	619092	junction_3	949405.1509325193	NA	1	NA	TRUE	NA	NA	NA	A	coding	154	465	140	604	25.0	7	True	AATAAA	-18
PB.634.1	chr1	-	4449	7	full-splice_match	NRAS	ENST00000369535.4	4449	7	139	-139	139	139	multi-exon	FALSE	canonical	1	624239	junction_5	110273.2572769673	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	116	685	25.0	9	True	AATATA	-22
PB.634.3	chr1	-	4238	7	novel_not_in_catalog	NRAS	novel	4449	7	NA	NA	123	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	302191.3824413356	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	37	615	35.0	-7	True	AATAAA	-26
PB.634.2	chr1	-	4374	7	full-splice_match	NRAS	ENST00000369535.4	4449	7	73	2	73	-2	multi-exon	FALSE	canonical	1	624239	junction_5	110273.2572769673	NA	3	NA	TRUE	NA	NA	NA	C	coding	189	570	182	751	35.0	8473	False	AATAAA	-26
PB.634.5	chr1	-	4156	6	novel_in_catalog	NRAS	novel	4449	7	NA	NA	112	-2	no_combination_of_known_junctions	FALSE	canonical	1	9060	junction_4	327440.7103544701	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-18	True	AATAAA	-26
PB.634.4	chr1	-	4163	8	novel_not_in_catalog	NRAS	novel	4449	7	NA	NA	127	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	279776.51579466794	NA	6	1	TRUE	NA	NA	NA	C	coding	189	570	128	697	35.0	-3	True	AATAAA	-26
PB.5058.2	chr17	+	2095	4	full-splice_match	LINC02210	ENST00000585118.5	546	4	18	-1567	0	2	multi-exon	FALSE	canonical	1	16452	junction_1	70594.07635363056	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-25
PB.11759.18	chr9	-	2523	8	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	2605	-1573	any annotated donor/acceptor	FALSE	canonical	1	1680	junction_6	137610.20313485598	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	276	1469	30.0	-2	True	AAGAAA	-20
PB.8489.23	chr3	-	2163	12	novel_not_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	450555.4804905453	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	822	1721	40.0	-1	True	AATAAA	-21
PB.3531.5	chr14	-	1382	4	full-splice_match	SYNJ2BP	ENST00000256366.5	7015	4	-28	5661	-12	331	multi-exon	FALSE	canonical	1	187525	junction_2	41785.58644636529	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	111	548	90.0	-7	True	NA	NA
PB.3531.4	chr14	-	2191	4	full-splice_match	SYNJ2BP	ENST00000256366.5	7015	4	-21	4845	-5	1147	multi-exon	FALSE	canonical	1	187525	junction_2	41785.58644636529	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	104	541	25.0	0	True	AATAAA	-22
PB.3531.3	chr14	-	2514	4	full-splice_match	SYNJ2BP	ENST00000256366.5	7015	4	-15	4516	1	1476	multi-exon	FALSE	canonical	1	187525	junction_2	41785.58644636529	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	98	535	25.0	6	True	ATTAAA	-16
PB.3531.2	chr14	-	4403	4	full-splice_match	SYNJ2BP	ENST00000256366.5	7015	4	-27	2639	-11	-2639	multi-exon	FALSE	canonical	1	187525	junction_2	41785.58644636529	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	110	547	85.0	-6	True	NA	NA
PB.3531.1	chr14	-	2611	5	novel_not_in_catalog	SYNJ2BP-COX16	novel	929	6	NA	NA	-16	-6918	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	104628.57433649519	NA	0	NA	TRUE	NA	NA	NA	A	coding	145	438	128	565	25.0	-24	True	AATAAA	-20
PB.425.8	chr1	-	2191	1	novel_in_catalog	TMEM59	novel	6691	8	NA	NA	-34	-5550	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-23	True	NA	NA
PB.9289.4	chr5	+	1642	5	full-splice_match	BTF3	ENST00000508901.1	954	5	-24	-664	0	0	multi-exon	FALSE	canonical	1	2741970	junction_3	1318540.5550491232	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	111	581	25.0	6	True	AATAAA	-14
PB.7057.24	chr2	+	2035	16	novel_not_in_catalog	SP100	novel	3882	25	NA	NA	-19	-3	any annotated donor/acceptor	FALSE	canonical	1	3007	junction_14	260588.93747905383	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	96	1535	30.0	-18	True	NA	NA
PB.613.1	chr1	+	1764	7	full-splice_match	ATP5PB	ENST00000369722.7	3156	7	520	872	-9	569	multi-exon	FALSE	canonical	1	219924	junction_5	879107.9868392006	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	87	857	85.0	-38	True	NA	NA
PB.613.2	chr1	+	3683	2	incomplete-splice_match	ATP5PB	ENST00000493119.5	716	5	601	2743	0	-2743	internal_fragment	FALSE	canonical	1	2604589	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	55	168	170	337	85.0	-29	True	NA	NA
PB.613.3	chr1	+	2904	6	novel_in_catalog	ATP5PB	novel	716	5	NA	NA	6	-5	intron_retention	FALSE	canonical	1	219924	junction_4	895208.1992460524	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	2125	2571	30.0	-23	True	NA	NA
PB.613.4	chr1	+	1240	8	novel_not_in_catalog	ATP5PB	novel	716	5	NA	NA	1	5750	any annotated donor/acceptor	FALSE	canonical	1	2130	junction_7	965107.2541455732	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	57	827	15.0	-8	True	NA	NA
PB.10884.8	chr7	-	3211	14	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	1334	junction_11	60992.25864574995	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	162	1553	25.0	7	True	AATAAA	-16
PB.9172.7	chr5	-	2046	5	full-splice_match	AMACR	ENST00000335606.10	4153	5	-6	2113	-6	16	multi-exon	FALSE	canonical	1	258555	junction_4	125744.38214588356	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	96	1244	15.0	-33	False	AATAAA	-17
PB.2877.1	chr12	-	2140	2	full-splice_match	SELPLG	ENST00000550948.1	2256	2	118	-2	118	2	multi-exon	FALSE	canonical	1	518167	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	412	1239	108	1346	30.0	1599	False	NA	NA
PB.9172.4	chr5	-	3105	5	full-splice_match	AMACR	ENST00000335606.10	4153	5	52	996	-25	0	multi-exon	FALSE	canonical	1	258555	junction_4	125744.38214588356	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	38	1186	10.0	-8	True	NA	NA
PB.6381.3	chr2	+	3508	14	novel_not_in_catalog	ZNF512	novel	3543	13	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	4826	junction_13	127942.73221338073	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	245	1420	25.0	-2	True	AATAAA	-11
PB.11927.2	chr9	-	1021	8	full-splice_match	EXD3	ENST00000479452.5	962	8	-60	1	-4	-1	multi-exon	FALSE	canonical	1	28113	junction_1	26605.982038723883	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	150	890	10.0	15	False	AATAAA	-13
PB.3377.4	chr14	-	1274	2	full-splice_match	SPTSSA	ENST00000298130.4	2777	2	113	1390	113	-1390	multi-exon	FALSE	canonical	1	962167	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-4	True	ATTAAA	-4
PB.7160.8	chr20	-	2324	1	incomplete-splice_match	SLC23A2	ENST00000338244.5	6944	17	146817	3	31309	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	8785	False	AATAAA	-16
PB.7207.2	chr20	-	3839	11	full-splice_match	NAPB	ENST00000377026.4	3837	11	-7	5	-7	-5	multi-exon	FALSE	canonical	1	148073	junction_9	74719.9829818637	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	94	990	35.0	-35	True	AATAAA	-14
PB.1347.4	chr10	+	1624	3	full-splice_match	BAMBI	ENST00000375533.5	1877	3	181	72	13	-72	multi-exon	FALSE	canonical	1	348300	junction_1	65849.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	376	1158	10.0	0	True	NA	NA
PB.3377.3	chr14	-	2507	2	full-splice_match	SPTSSA	ENST00000298130.4	2777	2	114	156	114	-156	multi-exon	FALSE	canonical	1	962167	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-3	True	NA	NA
PB.7160.1	chr20	-	6608	14	novel_in_catalog	SLC23A2	novel	6944	17	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	10030	junction_8	65444.15977984546	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	386	1993	5.0	-5	True	AATAAA	-18
PB.1347.1	chr10	+	5274	1	novel_in_catalog	BAMBI	novel	1877	3	NA	NA	-12	94	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	150	453	4452	4904	35.0	-1	True	AATATA	-19
PB.1347.2	chr10	+	5656	1	genic	BAMBI	novel	NA	NA	NA	NA	11	237	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	150	453	4429	4881	85.0	-2	True	NA	NA
PB.1347.3	chr10	+	1461	3	full-splice_match	BAMBI	ENST00000375533.5	1877	3	181	235	13	27	multi-exon	FALSE	canonical	1	348300	junction_1	65849.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	376	1158	25.0	0	True	AATAAA	-15
PB.425.1	chr1	-	1711	8	full-splice_match	TMEM59	ENST00000234831.9	6691	8	-5	4985	-2	-3	multi-exon	FALSE	canonical	1	2671533	junction_6	158773.93806996444	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	256	1227	30.0	23	False	ATTAAA	-26
PB.11927.1	chr9	-	2504	6	novel_in_catalog	EXD3	novel	2176	15	NA	NA	0	1	intron_retention	FALSE	canonical	1	45390	junction_3	24684.20543262432	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	197	733	10.0	-32	False	AATAAA	-15
PB.6805.6	chr2	+	2078	8	full-splice_match	TANK	ENST00000259075.6	2152	8	57	17	-1	-2	multi-exon	FALSE	canonical	1	152487	junction_1	145698.9565673561	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	149	1426	20.0	2	True	ATTAAA	-11
PB.8907.6	chr4	-	2801	10	full-splice_match	SLC9B2	ENST00000503103.5	1911	10	-431	-459	10	-7	multi-exon	FALSE	canonical	1	24407	junction_1	60748.41232310337	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	623	1876	25.0	-45	True	AATAAA	-42
PB.9172.1	chr5	-	3291	5	full-splice_match	AMACR	ENST00000335606.10	4153	5	7	855	3	141	multi-exon	FALSE	canonical	1	258555	junction_4	125744.38214588356	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	83	1231	75.0	-20	True	NA	NA
PB.6381.2	chr2	+	3360	13	full-splice_match	ZNF512	ENST00000556601.5	3543	13	59	124	-2	-3	multi-exon	FALSE	canonical	1	83855	junction_1	79925.49109517911	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	264	1730	25.0	-18	True	AATAAA	-11
PB.10869.6	chr7	-	3016	6	novel_in_catalog	DGKI	novel	12928	33	NA	NA	-80	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_5	7759.530619824888	NA	0	NA	TRUE	NA	NA	NA	B	coding	126	381	233	613	70.0	2	True	NA	NA
PB.10869.4	chr7	-	3116	8	novel_not_in_catalog	DGKI	novel	12928	33	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	178	junction_3	8354.275610703291	NA	0	NA	TRUE	NA	NA	NA	B	coding	98	297	25	321	70.0	-7	True	NA	NA
PB.10869.5	chr7	-	2967	7	novel_in_catalog	DGKI	novel	12928	33	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	728	junction_6	7369.5165377384155	NA	0	NA	TRUE	NA	NA	NA	B	coding	178	537	28	564	70.0	-10	True	NA	NA
PB.10869.2	chr7	-	4209	7	novel_in_catalog	DGKI	novel	12928	33	NA	NA	-82	1165	combination_of_known_junctions	FALSE	canonical	1	728	junction_6	7369.5165377384155	NA	1	NA	TRUE	NA	NA	NA	B	coding	199	600	42	641	20.0	0	True	AATAAA	-18
PB.9311.14	chr5	-	1804	5	full-splice_match	LHFPL2	ENST00000380345.6	5043	5	264	2975	56	620	multi-exon	FALSE	canonical	1	83678	junction_2	22072.3763262477	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	443	1099	25.0	-1	True	NA	NA
PB.7207.4	chr20	-	3779	10	full-splice_match	NAPB	ENST00000398425.7	3824	10	37	8	6	-5	multi-exon	FALSE	canonical	1	16553	junction_7	90921.60522337395	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	316	930	35.0	-22	True	AATAAA	-14
PB.10869.8	chr7	-	2276	7	novel_in_catalog	DGKI	novel	12928	33	NA	NA	-93	-779	combination_of_known_junctions	FALSE	canonical	1	728	junction_6	7369.5165377384155	NA	0	NA	TRUE	NA	NA	NA	B	coding	199	600	53	652	25.0	-11	True	AATAAA	-31
PB.10869.9	chr7	-	1667	7	novel_in_catalog	DGKI	novel	12928	33	NA	NA	-81	331	combination_of_known_junctions	FALSE	canonical	1	728	junction_6	7369.5165377384155	NA	1	NA	TRUE	NA	NA	NA	B	coding	199	600	41	640	75.0	1	True	AATAGA	-21
PB.3525.1	chr14	-	4251	4	novel_not_in_catalog	ERH	novel	1124	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	967710.539473567	NA	5	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-10	True	AATAAA	-25
PB.3525.2	chr14	-	816	4	full-splice_match	ERH	ENST00000557016.5	1124	4	307	1	-21	-1	multi-exon	FALSE	canonical	1	1002239	junction_1	591183.3393651152	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	88	402	5.0	-31	True	AATAAA	-24
PB.8128.8	chr3	+	2942	23	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22527	18918	no_combination_of_known_junctions	FALSE	canonical	1	10247	junction_15	331637.19607733254	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	165	2435	5.0	-35	True	AAGAAA	-16
PB.2697.2	chr12	-	4205	24	novel_not_in_catalog	AC137834.1	novel	2107	15	NA	NA	-134330	-4156	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	112678.40401812512	NA	8	2	TRUE	NA	NA	NA	A	coding	854	2565	633	3197	20.0	-25	True	TATAAA	-20
PB.2697.1	chr12	-	4172	24	full-splice_match	R3HDM2	ENST00000402412.5	4372	24	205	-5	8	2	multi-exon	TRUE	canonical	1	66984	junction_23	91766.08410794598	NA	2	NA	TRUE	NA	NA	NA	A	coding	990	2973	187	3159	10.0	-11	True	TATAAA	-25
PB.10814.1	chr7	-	4512	11	full-splice_match	WASL	ENST00000223023.4	4435	11	-93	16	-93	-16	multi-exon	FALSE	canonical	1	263598	junction_10	59310.50408561708	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	427	1944	60.0	397	False	AATAAA	-14
PB.8506.6	chr3	-	3353	4	novel_in_catalog	BCHE	novel	2454	4	NA	NA	-1	1088	combination_of_known_junctions	FALSE	canonical	1	1523	junction_1	38407.91794235489	NA	7	NA	TRUE	NA	NA	NA	C	coding	609	1830	60	1889	45.0	-2	True	AATAAA	-15
PB.10814.5	chr7	-	3633	11	full-splice_match	WASL	ENST00000223023.4	4435	11	25	777	25	-777	multi-exon	FALSE	canonical	1	263598	junction_10	59310.50408561708	NA	4	NA	TRUE	NA	NA	NA	C	coding	505	1518	309	1826	50.0	515	False	AATAAA	-17
PB.262.11	chr1	+	2409	12	novel_in_catalog	RBBP4	novel	1788	12	NA	NA	28	0	intron_retention	FALSE	canonical	1	913	junction_1	169381.9058169979	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	291	1463	20.0	305	False	AATAAA	-15
PB.8506.7	chr3	-	1958	3	novel_not_in_catalog	BCHE	novel	2454	4	NA	NA	0	-29709	any annotated donor/acceptor	FALSE	canonical	1	209	junction_1	31251.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	530	1593	59	1651	75.0	-1	True	NA	NA
PB.1838.11	chr11	-	1804	5	incomplete-splice_match	PIK3C2A	ENST00000533645.1	2101	6	-48	7202	-12	-7202	3prime_fragment	FALSE	canonical	1	129640	junction_4	42809.211020380884	NA	1	NA	TRUE	NA	NA	NA	B	coding	483	1452	214	1665	50.0	-32	True	NA	NA
PB.1838.10	chr11	-	6147	33	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	-3	-2284	combination_of_known_junctions	FALSE	canonical	1	129640	junction_32	68876.41292016464	NA	1	NA	TRUE	NA	NA	NA	B	coding	1686	5061	205	5265	30.0	-23	True	AATAAA	-36
PB.1838.12	chr11	-	3029	4	incomplete-splice_match	PIK3C2A	ENST00000533645.1	2101	6	-17	7656	-14	-7656	3prime_fragment	FALSE	canonical	1	129640	junction_3	49423.92889639143	NA	1	NA	TRUE	NA	NA	NA	B	coding	460	1383	183	1565	30.0	-1	True	NA	NA
PB.241.4	chr1	-	2546	10	novel_not_in_catalog	SNRNP40	novel	1597	10	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	20953	junction_1	183464.9021203366	NA	2	NA	TRUE	NA	NA	NA	C	coding	409	1230	23	1252	30.0	8	True	ATTAAA	-23
PB.8506.1	chr3	-	2480	5	full-splice_match	BCHE	ENST00000497011.5	2522	5	43	-1	1	0	multi-exon	FALSE	canonical	1	1581	junction_2	39850.268520895814	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	58	1803	5.0	0	True	ATTAAA	-18
PB.9617.21	chr5	-	2067	11	incomplete-splice_match	FBXW11	ENST00000393802.6	2181	12	1	4621	0	-407	3prime_fragment	FALSE	canonical	1	83976	junction_10	61602.72572419178	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	148	1674	85.0	-12	True	NA	NA
PB.9617.20	chr5	-	2131	12	incomplete-splice_match	FBXW11	ENST00000296933.10	4539	13	223	6693	0	-407	3prime_fragment	FALSE	canonical	1	66815	junction_11	76780.78809687264	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	149	1738	85.0	-13	True	NA	NA
PB.9617.22	chr5	-	2987	10	novel_in_catalog	FBXW11	novel	4539	13	NA	NA	2	-408	intron_retention	FALSE	canonical	1	83976	junction_9	64903.048416679	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	137	1549	85.0	-1	True	NA	NA
PB.7884.1	chr22	-	2419	12	full-splice_match	MAPK11	ENST00000330651.10	2431	12	11	1	11	-1	multi-exon	FALSE	canonical	1	60319	junction_11	50056.75367945488	NA	0	NA	TRUE	NA	NA	NA	A	coding	364	1095	91	1185	25.0	-6	True	AATAAA	-15
PB.8780.8	chr4	-	1911	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	83	-800	83	800	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	5	NA	TRUE	NA	NA	NA	C	coding	165	498	308	805	40.0	-11	True	AATATA	-10
PB.8780.9	chr4	-	1105	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	83	6	83	-6	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	308	805	30.0	-11	True	AATACA	-14
PB.6720.2	chr2	-	7762	37	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	1	-60	combination_of_known_junctions	FALSE	canonical	1	6368	junction_12	73530.27223017099	NA	4	2	TRUE	NA	NA	NA	B	coding	1461	4386	352	4737	90.0	24	True	NA	NA
PB.6720.6	chr2	-	7873	38	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	6368	junction_12	78911.15836582912	NA	6	1	TRUE	NA	NA	NA	B	coding	1477	4434	357	4790	20.0	19	True	AATAAA	-14
PB.6720.7	chr2	-	7795	37	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	-8	-60	combination_of_known_junctions	FALSE	canonical	1	6368	junction_12	70858.23426854947	NA	3	1	TRUE	NA	NA	NA	B	coding	1469	4410	361	4770	90.0	15	True	NA	NA
PB.11335.1	chr8	+	2889	10	novel_in_catalog	SQLE	novel	1879	11	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	1473	junction_9	283279.1186994042	NA	2	1	TRUE	NA	NA	NA	C	coding	487	1464	917	2380	10.0	-7073	False	AATAAA	-11
PB.8780.1	chr4	-	4902	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	59	-3767	59	3767	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	3	NA	TRUE	NA	NA	NA	C	coding	165	498	332	829	30.0	6	True	AATAAA	-21
PB.3337.1	chr14	+	2001	2	novel_not_in_catalog	DHRS4L2	novel	1450	6	NA	NA	0	-17041	any annotated donor/acceptor	FALSE	canonical	1	3878	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	151	456	1	456	80.0	-84	False	NA	NA
PB.8780.3	chr4	-	3671	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	34	-2511	34	2511	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	357	854	35.0	-19	True	AATAAA	-24
PB.8780.4	chr4	-	2847	6	novel_not_in_catalog	CHIC2	novel	1194	6	NA	NA	86	1743	any annotated donor/acceptor	FALSE	canonical	1	5293	junction_4	164347.3592177252	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	TTTAAA	-7
PB.8780.5	chr4	-	2586	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	20	-1412	20	1412	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	371	868	25.0	-33	True	ATTAAA	-16
PB.8780.6	chr4	-	2089	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	178	-1073	178	1073	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	213	710	35.0	0	True	ATTAAA	-14
PB.8780.7	chr4	-	2031	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	84	-921	84	921	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	307	804	30.0	-10	True	TATAAA	-20
PB.1637.4	chr10	-	3782	1	novel_in_catalog	STN1	novel	1417	10	NA	NA	31	-31648	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	9	True	NA	NA
PB.9043.4	chr4	+	4267	13	full-splice_match	ETFDH	ENST00000511912.5	3282	13	152	-1137	-30	1137	multi-exon	FALSE	canonical	1	118647	junction_1	71532.56657266131	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	181	2034	25.0	-39	True	ATTAAA	-19
PB.10718.9	chr7	-	2712	15	novel_in_catalog	TAF6	novel	2685	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	37844	junction_14	218237.43483641755	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	542	2545	25.0	-8	True	AATAAA	-13
PB.1637.1	chr10	-	2216	10	full-splice_match	STN1	ENST00000224950.7	1417	10	22	-821	22	821	multi-exon	FALSE	canonical	1	131457	junction_9	55662.250373276176	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	147	1253	40.0	0	True	AATAAA	-9
PB.1637.2	chr10	-	1874	10	full-splice_match	STN1	ENST00000224950.7	1417	10	11	-468	11	468	multi-exon	FALSE	canonical	1	131457	junction_9	55662.250373276176	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	158	1264	15.0	-11	True	AATAAA	-18
PB.1637.3	chr10	-	1458	10	full-splice_match	STN1	ENST00000224950.7	1417	10	-12	-29	-12	29	multi-exon	FALSE	canonical	1	131457	junction_9	55662.250373276176	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	181	1287	10.0	-34	True	CATAAA	-14
PB.10718.5	chr7	-	2397	15	novel_in_catalog	TAF6	novel	2685	15	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	60584	junction_13	195642.41720651524	NA	2	NA	TRUE	NA	NA	NA	C	coding	667	2004	219	2222	15.0	-9	True	AATAAA	-21
PB.10718.4	chr7	-	2423	15	full-splice_match	TAF6	ENST00000453269.6	2464	15	40	1	1	-1	multi-exon	FALSE	canonical	1	193594	junction_14	144270.99946757298	NA	2	NA	TRUE	NA	NA	NA	C	coding	677	2034	215	2248	15.0	-5	True	AATAAA	-21
PB.10718.6	chr7	-	2302	15	full-splice_match	TAF6	ENST00000452041.5	2297	15	2	-7	2	-1	multi-exon	FALSE	canonical	1	12798	junction_14	181814.76807753195	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	94	2127	15.0	-9	True	AATAAA	-21
PB.10718.1	chr7	-	2748	15	full-splice_match	TAF6	ENST00000344095.8	2727	15	-13	-8	0	-1	multi-exon	FALSE	canonical	1	37844	junction_14	176357.31191516804	NA	2	NA	TRUE	NA	NA	NA	C	coding	677	2034	540	2573	15.0	-6	True	AATAAA	-21
PB.8489.8	chr3	-	3698	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-3	intron_retention	FALSE	canonical	1	124093	junction_6	431772.76350415684	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	2357	3256	40.0	-1	True	AATAAA	-21
PB.2532.1	chr12	+	2106	4	full-splice_match	ETFBKMT	ENST00000357721.3	6128	4	-8	4030	-8	117	multi-exon	FALSE	canonical	1	7451	junction_1	5628.60209604086	NA	1	NA	TRUE	NA	NA	NA	A	coding	262	789	224	1012	35.0	-8	True	NA	NA
PB.10718.2	chr7	-	2566	16	novel_in_catalog	TAF6	novel	2685	15	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	31799	junction_15	217620.14843602042	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	358	2391	15.0	7801	False	AATAAA	-21
PB.8489.9	chr3	-	3675	11	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	16	-3	intron_retention	FALSE	canonical	1	124093	junction_6	425072.04369334853	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	2334	3233	40.0	-5	True	AATAAA	-21
PB.5617.16	chr19	-	2784	13	novel_not_in_catalog	EEF2	novel	352	2	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	6472294.182776413	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	913	2289	10.0	-1	True	AATAAA	-14
PB.5617.17	chr19	-	2309	13	novel_not_in_catalog	EEF2	novel	352	2	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	6852523.651925727	NA	1	1	TRUE	NA	NA	NA	C	coding	710	2133	84	2216	10.0	-1	True	AATAAA	-14
PB.379.32	chr1	-	2752	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	-3	58	combination_of_known_junctions	FALSE	canonical	1	112552	junction_11	207349.59014246432	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1242	2666	25.0	973	False	AAGAAA	-19
PB.4414.1	chr16	-	2449	2	full-splice_match	SIAH1	ENST00000356721.3	2415	2	-41	7	-41	-7	multi-exon	FALSE	canonical	1	14816	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	466	1407	40.0	-56	False	ATTAAA	-18
PB.4414.2	chr16	-	2053	2	full-splice_match	SIAH1	ENST00000394725.2	2147	2	87	7	87	-7	multi-exon	FALSE	canonical	1	179196	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	163	1011	40.0	-23	True	ATTAAA	-18
PB.4414.3	chr16	-	1532	2	full-splice_match	SIAH1	ENST00000394725.2	2147	2	91	524	91	-524	multi-exon	FALSE	canonical	1	179196	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	159	1007	15.0	-19	True	AATAAA	-14
PB.5438.9	chr18	-	5232	27	novel_in_catalog	TRAPPC8	novel	6226	29	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	2433	junction_25	72084.59290589276	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	750	4418	25.0	-12	True	AATAAA	-18
PB.18.32	chr1	-	2127	11	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_6	440794.08183219744	NA	2	1	TRUE	NA	NA	NA	C	coding	298	897	708	1604	45.0	-23	True	AATAAA	-20
PB.1359.7	chr10	-	5864	26	full-splice_match	KIF5B	ENST00000302418.4	5877	26	10	3	10	-3	multi-exon	FALSE	canonical	1	730493	junction_25	239554.24006755216	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	449	3340	35.0	3	True	AATAAA	-21
PB.18.33	chr1	-	4651	10	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-17	1	intron_retention	FALSE	canonical	1	614919	junction_9	307048.5950204376	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	3236	4132	45.0	8470	False	AATAAA	-16
PB.11357.9	chr8	-	4383	32	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	22705	junction_31	135263.07054934488	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	164	3322	30.0	0	True	ATTAAA	-15
PB.6978.1	chr2	-	2249	10	full-splice_match	IDH1	ENST00000446179.5	2298	10	14	35	14	-2	multi-exon	FALSE	canonical	1	12969	junction_9	411634.3930424572	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	193	1437	40.0	668	False	ATTAAA	-21
PB.6978.3	chr2	-	2287	10	full-splice_match	IDH1	ENST00000345146.6	2382	10	55	40	-17	-2	multi-exon	FALSE	canonical	1	413745	junction_4	335236.19777165336	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	231	1475	40.0	-8	True	ATTAAA	-21
PB.18.31	chr1	-	2951	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	0	intron_retention	FALSE	canonical	1	101290	junction_6	410179.58636860596	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	1532	2428	45.0	-23	True	AATAAA	-20
PB.6978.5	chr2	-	2397	10	full-splice_match	IDH1	ENST00000415913.5	2441	10	79	-35	79	2	multi-exon	FALSE	canonical	1	26998	junction_9	409051.49629518937	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	304	1548	5.0	-2	True	ATTAAA	-18
PB.379.35	chr1	-	2792	13	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	1	57	combination_of_known_junctions	FALSE	canonical	1	61556	junction_12	230505.26751043144	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1283	2707	25.0	977	False	AAGAAA	-18
PB.379.34	chr1	-	2761	12	full-splice_match	GPBP1L1	ENST00000290795.7	3599	12	-27	865	-27	59	multi-exon	FALSE	canonical	1	102794	junction_11	209699.26335907535	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1250	2674	25.0	-37	True	AAGAAA	-20
PB.8489.7	chr3	-	3938	11	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	236802	junction_7	393049.7895516037	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	2597	3496	40.0	5	True	AATAAA	-21
PB.8172.15	chr3	-	2687	8	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	2	-2	intron_retention	FALSE	canonical	1	86704	junction_6	171165.98620541836	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	609	1388	20.0	1	True	AATAAA	-12
PB.9827.1	chr6	-	4840	4	full-splice_match	ZBED9	ENST00000452236.2	4877	4	36	1	36	-1	multi-exon	FALSE	canonical	1	11768	junction_2	2361.673465057258	NA	0	NA	TRUE	NA	NA	NA	C	coding	1325	3978	583	4560	10.0	-2	True	NA	NA
PB.18.34	chr1	-	3917	12	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	648	junction_1	430147.5458531306	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	2613	3593	45.0	-1	True	AATAAA	-15
PB.9827.2	chr6	-	2955	4	novel_not_in_catalog	ZBED9	novel	5339	5	NA	NA	37	-1914	any annotated donor/acceptor	FALSE	canonical	1	1437	junction_2	7163.217898868264	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	1202	2953	65.0	-1	True	NA	NA
PB.18.35	chr1	-	1194	6	full-splice_match	CCNL2	ENST00000408918.8	1186	6	-7	-1	1	1	multi-exon	FALSE	canonical	1	614919	junction_5	144063.43519297324	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	19	699	20.0	-11	True	AATACA	-19
PB.8214.4	chr3	+	2968	9	full-splice_match	SLC25A26	ENST00000336733.10	1023	9	-11	-1934	-11	1086	multi-exon	FALSE	canonical	1	96643	junction_1	81035.07280945934	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	211	762	55.0	0	True	ATTAAA	-12
PB.8005.10	chr3	-	5624	37	novel_not_in_catalog	CLASP2	novel	6273	2	NA	NA	28	-8	any annotated donor/acceptor	FALSE	canonical	1	430	junction_36	109914.39129373118	NA	1	1	TRUE	NA	NA	NA	C	coding	1423	4272	485	4756	50.0	5	True	AATAAA	-20
PB.1051.27	chr1	+	5148	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_3	194674.6697833817	NA	3	1	TRUE	NA	NA	NA	C	coding	810	2433	991	3423	25.0	14	True	AATAAA	-18
PB.8172.16	chr3	-	2203	7	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	1	-2	intron_retention	FALSE	canonical	1	18772	junction_6	173754.02531780058	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	125	904	20.0	0	True	AATAAA	-12
PB.881.4	chr1	+	1424	7	novel_not_in_catalog	FCGR2B	novel	1440	7	NA	NA	10	-48	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	85212.6821951339	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAGA	-44
PB.8214.2	chr3	+	1770	7	novel_in_catalog	SLC25A26	novel	2673	11	NA	NA	-22	-8	intron_retention	FALSE	canonical	1	17621	junction_4	128331.45101054621	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-11	True	AATAAA	-14
PB.11009.1	chr8	-	3582	3	intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	564	junction_1	477.0	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	12	True	AATAAA	-25
PB.11248.3	chr8	+	2734	3	novel_not_in_catalog	PLEKHF2	novel	2881	2	NA	NA	27	0	any annotated donor/acceptor	FALSE	canonical	1	759	junction_2	59775.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	215	844	15.0	-2	True	AATAAA	-17
PB.6795.7	chr2	+	5823	26	novel_in_catalog	TANC1	novel	7470	27	NA	NA	-31	-1564	no_combination_of_known_junctions	FALSE	canonical	1	4046	junction_1	35977.94410135187	NA	0	NA	TRUE	NA	NA	NA	C	coding	1861	5586	159	5744	40.0	-1	True	ATTAAA	-17
PB.2509.14	chr12	-	3114	11	full-splice_match	BCAT1	ENST00000261192.11	9674	11	317	6243	-56	1216	multi-exon	FALSE	canonical	1	251866	junction_9	85028.1542363469	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	211	1371	35.0	2914	False	AATAAA	-17
PB.6358.7	chr2	-	4068	4	novel_in_catalog	ASXL2	novel	12878	13	NA	NA	-19	-27218	no_combination_of_known_junctions	FALSE	canonical	1	1898	junction_2	55953.9868661941	NA	1	1	TRUE	NA	NA	NA	B	coding	137	414	264	677	30.0	-28	True	AATAAA	-18
PB.8214.1	chr3	+	1224	10	incomplete-splice_match	SLC25A26	ENST00000354883.10	2673	11	87380	826	-22	22	5prime_fragment	FALSE	canonical	1	80991	junction_1	85512.75522501214	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	106	930	20.0	-11	True	AATAAA	-40
PB.5646.1	chr19	+	1046	6	full-splice_match	CLPP	ENST00000245816.9	1157	6	104	7	-9	1	multi-exon	FALSE	canonical	1	681532	junction_1	263649.3260506463	NA	2	NA	TRUE	NA	NA	NA	A	coding	277	834	20	853	10.0	25	True	ATTAAA	-16
PB.7111.16	chr2	-	4482	29	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	1	9721	junction_27	982011.997517155	NA	6	2	TRUE	NA	NA	NA	C	coding	1268	3807	290	4096	15.0	-19	False	AATAAA	-23
PB.3672.2	chr14	-	2186	5	novel_in_catalog	MOK	novel	2041	5	NA	NA	14	0	intron_retention	FALSE	canonical	1	6877	junction_4	36773.9059074162	NA	0	NA	TRUE	NA	NA	NA	B	coding	155	468	1271	1738	25.0	1405	False	ATTAAA	-17
PB.3672.1	chr14	-	1991	11	novel_in_catalog	MOK	novel	2041	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	23515	junction_9	23641.482453729503	NA	0	NA	TRUE	NA	NA	NA	B	coding	401	1206	185	1390	20.0	1	True	ATTAAA	-26
PB.7001.11	chr2	+	1170	11	full-splice_match	ARPC2	ENST00000315717.9	1505	11	95	240	-5	0	multi-exon	FALSE	canonical	1	1847506	junction_1	1857704.7692289643	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	75	977	90.0	0	True	NA	NA
PB.730.8	chr1	-	2112	9	novel_not_in_catalog	CTSS	novel	4107	8	NA	NA	-30	-80	any annotated donor/acceptor	FALSE	canonical	1	443	junction_1	566200.0208092184	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	127	1122	10.0	-31	True	NA	NA
PB.730.9	chr1	-	2077	8	full-splice_match	CTSS	ENST00000368985.7	4107	8	160	1870	-5	501	multi-exon	FALSE	canonical	1	1078338	junction_4	276202.59509324835	NA	3	NA	TRUE	NA	NA	NA	C	coding	331	996	102	1097	5.0	-6	True	NA	NA
PB.6942.8	chr2	+	2593	10	novel_not_in_catalog	CFLAR	novel	14672	10	NA	NA	3284	7	any annotated donor/acceptor	FALSE	canonical	1	864	junction_1	257956.8471443754	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	168	1556	5.0	-7204	False	NA	NA
PB.6942.9	chr2	+	4549	5	novel_in_catalog	CFLAR	novel	14672	10	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	1	17483	junction_1	349259.1809791834	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	345	1097	5.0	-3651	False	NA	NA
PB.5110.2	chr17	+	2157	16	novel_in_catalog	ACSF2	novel	1745	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	16675	junction_8	106273.34301975992	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	45	1874	0.0	0	True	CATAAA	-19
PB.5110.3	chr17	+	1931	16	full-splice_match	ACSF2	ENST00000300441.8	2235	16	60	244	0	-79	multi-exon	FALSE	canonical	1	158052	junction_1	67220.86792457632	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	45	1892	25.0	0	True	AATAAA	-35
PB.5110.1	chr17	+	2176	16	full-splice_match	ACSF2	ENST00000300441.8	2235	16	60	-1	0	-1	multi-exon	FALSE	canonical	1	158052	junction_1	67220.86792457632	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	45	1892	0.0	0	True	CATAAA	-20
PB.6942.2	chr2	+	3221	11	novel_not_in_catalog	CFLAR	novel	14672	10	NA	NA	14	3264	intron_retention	FALSE	canonical	1	9019	junction_10	255962.26818515654	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	439	1827	50.0	0	True	NA	NA
PB.6942.3	chr2	+	1988	10	full-splice_match	CFLAR	ENST00000309955.7	14672	10	306	12378	3	30	multi-exon	FALSE	canonical	1	196661	junction_1	190976.8244010801	NA	4	NA	TRUE	NA	NA	NA	C	coding	480	1443	210	1652	30.0	-9419	False	NA	NA
PB.730.2	chr1	-	3977	8	full-splice_match	CTSS	ENST00000368985.7	4107	8	139	-9	-26	9	multi-exon	FALSE	canonical	1	1078338	junction_4	276202.59509324835	NA	3	NA	TRUE	NA	NA	NA	C	coding	331	996	123	1118	25.0	-27	True	NA	NA
PB.6942.1	chr2	+	1273	6	full-splice_match	CFLAR	ENST00000341222.10	1283	6	14	-4	14	0	multi-exon	FALSE	canonical	1	196661	junction_1	241467.84719908363	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	439	1104	15.0	0	True	NA	NA
PB.6942.6	chr2	+	1934	10	full-splice_match	CFLAR	ENST00000423241.6	2128	10	186	8	13	-8	multi-exon	FALSE	canonical	1	174040	junction_1	195135.23318008697	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	363	1805	60.0	13	True	NA	NA
PB.9619.1	chr5	-	2982	3	full-splice_match	UBTD2	ENST00000393792.2	3301	3	313	6	313	-6	multi-exon	FALSE	canonical	1	187785	junction_2	78440.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	94	798	5.0	1	True	AAAAAG	-11
PB.5683.14	chr19	-	3296	11	novel_not_in_catalog	ZNF266	novel	3509	11	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	84753.49150660401	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	768	2618	15.0	3	True	NA	NA
PB.8430.42	chr3	-	2502	17	novel_in_catalog	COPB2	novel	3360	22	NA	NA	-1	-4585	combination_of_known_junctions	FALSE	canonical	1	3441	junction_16	433865.4305355665	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1896	605	2500	35.0	1	True	NA	NA
PB.7804.6	chr22	+	2722	22	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5557	19646	no_combination_of_known_junctions	FALSE	canonical	1	16484	junction_19	148650.51106430145	NA	2	NA	TRUE	NA	NA	NA	C	coding	719	2160	213	2372	10.0	-18	True	AATAAA	-22
PB.7804.7	chr22	+	2950	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5560	19639	intron_retention	FALSE	canonical	1	118069	junction_2	137413.78443338466	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	328	2118	30.0	-15	True	AATAAA	-15
PB.7804.4	chr22	+	2995	22	full-splice_match	SGSM3	ENST00000248929.13	2969	22	-25	-1	-5	1	multi-exon	FALSE	canonical	1	331892	junction_19	104584.80980455468	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	215	2464	10.0	-20	True	NA	NA
PB.7804.5	chr22	+	2963	21	incomplete-splice_match	SGSM3	ENST00000248929.13	2969	22	-25	187	-5	-1	intron_retention	FALSE	canonical	1	331892	junction_19	107090.5050116489	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	215	2518	30.0	-20	True	AATAAA	-15
PB.7804.2	chr22	+	3080	21	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5541	19647	intron_retention	FALSE	canonical	1	72675	junction_17	142146.85745699762	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	229	2127	15.0	-34	False	AATAAA	-23
PB.7804.3	chr22	+	2984	20	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5544	19637	intron_retention	FALSE	canonical	1	72675	junction_16	172905.1589892635	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	344	2041	30.0	-31	False	AATAAA	-13
PB.7804.1	chr22	+	2751	21	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5536	19647	no_combination_of_known_junctions	TRUE	canonical	1	118069	junction_2	142074.25359740588	NA	5	NA	TRUE	NA	NA	NA	C	coding	682	2049	352	2400	15.0	-39	False	AATAAA	-23
PB.9089.5	chr4	-	2044	8	novel_not_in_catalog	IRF2	novel	2303	9	NA	NA	-1522	-1	any annotated donor/acceptor	FALSE	canonical	1	10	junction_7	157718.23074659673	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	65	1000	5.0	-9976	False	AATAAA	-37
PB.7804.8	chr22	+	3252	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5561	19639	intron_retention	FALSE	canonical	1	341256	junction_7	96289.53958286608	NA	1	1	TRUE	NA	NA	NA	C	coding	546	1641	209	1849	30.0	-14	True	AATAAA	-15
PB.7804.9	chr22	+	2853	22	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5561	19640	any annotated donor/acceptor	FALSE	canonical	1	11412	junction_19	149499.6226301974	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	209	2509	30.0	-14	True	AATAAA	-16
PB.10760.4	chr7	-	2340	4	incomplete-splice_match	DPY19L2P2	ENST00000312132.8	4078	23	24	98696	24	-877	3prime_fragment	FALSE	canonical	1	9804	junction_3	9357.797081697285	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	235	705	15.0	-110	False	AGTAAA	-14
PB.10760.5	chr7	-	2351	1	novel_in_catalog	DPY19L2P2	novel	4078	23	NA	NA	-2	-4865	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	107	324	156	479	70.0	-31	True	TATAAA	-8
PB.1248.3	chr1	-	1862	4	full-splice_match	ZNF124	ENST00000543802.2	1292	4	-51	-519	-2	0	multi-exon	FALSE	canonical	1	29160	junction_1	53363.720399620644	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	142	1197	65.0	NA	False	AATATA	-18
PB.10760.1	chr7	-	6171	3	full-splice_match	DPY19L2P2	ENST00000446373.1	3006	3	-17	-3148	11	3148	multi-exon	FALSE	canonical	1	10813	junction_2	9947.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	143	511	10.0	-18	True	NA	NA
PB.10760.2	chr7	-	6281	4	novel_in_catalog	DPY19L2P2	novel	3994	23	NA	NA	-2	3143	intron_retention	FALSE	canonical	1	9804	junction_3	9357.797081697285	NA	4	NA	TRUE	NA	NA	NA	C	coding	156	471	156	626	20.0	-31	True	NA	NA
PB.10760.3	chr7	-	5910	3	full-splice_match	DPY19L2P2	ENST00000446373.1	3006	3	-30	-2874	-2	2874	multi-exon	FALSE	canonical	1	10813	junction_2	9947.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	156	524	20.0	-31	True	NA	NA
PB.9545.2	chr5	+	4137	21	full-splice_match	TCERG1	ENST00000394421.6	3633	21	-21	-483	0	1	multi-exon	FALSE	canonical	1	212876	junction_11	118884.97683571083	NA	1	NA	TRUE	NA	NA	NA	C	coding	1077	3234	40	3273	25.0	-22	True	AATAAA	-16
PB.10695.2	chr7	-	5259	17	novel_not_in_catalog	SMURF1	novel	5581	18	NA	NA	19611	2	any annotated donor/acceptor	FALSE	canonical	1	71678	junction_2	45745.38284146827	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	450	2111	5.0	NA	False	AATAAA	-17
PB.5277.12	chr17	-	1986	3	novel_not_in_catalog	SRSF2	novel	2885	2	NA	NA	-2	-262	intron_retention	FALSE	canonical	0	0	junction_1	859036.5	NA	2	1	TRUE	NA	NA	NA	C	coding	221	666	176	841	15.0	-5	True	ATTAAA	-15
PB.5277.13	chr17	-	2162	2	full-splice_match	SRSF2	ENST00000392485.2	2885	2	-2	725	-2	-263	multi-exon	FALSE	canonical	1	1718073	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	212	841	15.0	-5	True	ATTAAA	-14
PB.5277.11	chr17	-	1167	3	full-splice_match	SRSF2	ENST00000359995.9	1927	3	40	720	-1	-262	multi-exon	FALSE	canonical	1	1718073	junction_2	315795.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	175	840	15.0	-4	True	ATTAAA	-15
PB.11545.5	chr9	-	2580	2	full-splice_match	ZBTB5	ENST00000307750.4	4627	2	-53	2100	-53	-2100	multi-exon	FALSE	canonical	1	95591	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	677	2034	243	2276	55.0	-43	True	ATTAAA	-35
PB.6588.1	chr2	+	3093	7	full-splice_match	KCMF1	ENST00000409785.8	7568	7	246	4229	246	-4229	multi-exon	FALSE	non_canonical	0	0	junction_4	367131.2272020955	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	114	1259	20.0	-9	True	AATAAA	-17
PB.6588.2	chr2	+	1612	7	full-splice_match	KCMF1	ENST00000409785.8	7568	7	254	5702	254	-5702	multi-exon	FALSE	non_canonical	0	0	junction_4	367131.2272020955	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	106	1251	25.0	-1	True	AATAAA	-23
PB.8478.1	chr3	+	3877	15	full-splice_match	ARHGEF26	ENST00000465093.5	3929	15	25	27	25	0	multi-exon	FALSE	canonical	1	31819	junction_1	17880.281974560578	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	187	2802	100.0	-45	True	NA	NA
PB.9545.3	chr5	+	5832	14	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	352318	junction_3	78901.86525292373	NA	4	NA	TRUE	NA	NA	NA	C	coding	608	1827	40	1866	15.0	-22	True	NA	NA
PB.6648.2	chr2	+	1110	6	full-splice_match	UNC50	ENST00000357765.6	1143	6	29	4	29	-1	multi-exon	FALSE	canonical	1	370904	junction_1	116673.3077837429	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	124	903	25.0	-18	True	AATAAA	-13
PB.6648.1	chr2	+	2896	4	novel_in_catalog	UNC50	novel	1143	6	NA	NA	8	0	intron_retention	FALSE	canonical	1	491181	junction_3	89584.43027049337	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	1174	1476	25.0	-39	True	AATAAA	-14
PB.9902.1	chr6	-	1226	5	full-splice_match	HLA-DQB1	ENST00000434651.6	1642	5	-4	420	-4	-1	multi-exon	FALSE	canonical	1	588348	junction_4	179467.31082498006	NA	0	NA	TRUE	NA	NA	NA	A	coding	261	786	92	877	20.0	-42	True	ATTAAA	-15
PB.11132.17	chr8	-	2511	10	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	34	-13	any annotated donor/acceptor	FALSE	canonical	1	622	junction_7	89250.01044561961	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	339	827	15.0	34	True	AATAAA	-10
PB.11132.14	chr8	-	2188	6	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	4	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	73460.59614514437	NA	1	NA	TRUE	NA	NA	NA	C	coding	51	156	342	497	15.0	-17	True	AATAAA	-17
PB.11875.1	chr9	-	3703	18	full-splice_match	RALGDS	ENST00000372050.7	3634	18	-64	-5	-64	5	multi-exon	FALSE	canonical	1	88107	junction_17	144781.39081019443	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	87	2831	15.0	-1	True	ATTAAA	-23
PB.7653.2	chr22	+	3342	8	novel_in_catalog	SMARCB1	novel	1730	9	NA	NA	1	9	intron_retention	FALSE	canonical	1	839725	junction_1	322601.1013474248	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	2316	3008	30.0	6	True	AATAAA	-28
PB.886.2	chr1	+	4105	9	novel_not_in_catalog	UHMK1	novel	8117	8	NA	NA	14	1034	any annotated donor/acceptor	FALSE	canonical	1	1721	junction_7	206922.1999725984	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	183	1382	40.0	-27	True	NA	NA
PB.11879.1	chr9	+	883	8	full-splice_match	RPL7A	ENST00000323345.10	891	8	7	1	3	-1	multi-exon	FALSE	canonical	1	4506	junction_2	4522163.910599357	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	24	824	20.0	3	True	CATAAA	-30
PB.3264.25	chr13	+	4862	19	novel_in_catalog	ARHGEF7	novel	4361	19	NA	NA	74	1	combination_of_known_junctions	FALSE	canonical	1	7303	junction_1	127166.94660869145	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	303	2243	15.0	-1782	False	ATTAAA	-22
PB.3264.24	chr13	+	2071	19	novel_not_in_catalog	ARHGEF7	novel	4361	19	NA	NA	-761	-4209	any annotated donor/acceptor	FALSE	canonical	1	5989	junction_1	106076.51454387902	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1803	268	2070	45.0	0	True	ATTAAA	-12
PB.3264.27	chr13	+	4790	19	novel_in_catalog	ARHGEF7	novel	4361	19	NA	NA	190	-1	no_combination_of_known_junctions	FALSE	canonical	1	116	junction_1	110046.3179977744	NA	9	1	TRUE	NA	NA	NA	C	coding	646	1941	233	2173	20.0	0	True	ATTAAA	-20
PB.3264.26	chr13	+	4977	20	novel_in_catalog	ARHGEF7	novel	4361	19	NA	NA	91	2	combination_of_known_junctions	FALSE	canonical	1	7303	junction_1	109032.51315938019	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	417	2357	15.0	3	True	ATTAAA	-23
PB.3264.21	chr13	+	4827	20	novel_not_in_catalog	ARHGEF7	novel	4361	19	NA	NA	-762	0	any annotated donor/acceptor	FALSE	canonical	1	5989	junction_1	109231.92226946041	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	269	2209	20.0	-1	True	ATTAAA	-21
PB.3264.20	chr13	+	4697	19	novel_not_in_catalog	ARHGEF7	novel	4361	19	NA	NA	-763	0	any annotated donor/acceptor	FALSE	canonical	1	5989	junction_1	127342.90842227708	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	139	2079	20.0	-2	True	ATTAAA	-21
PB.3264.23	chr13	+	4610	18	novel_not_in_catalog	ARHGEF7	novel	4361	19	NA	NA	-761	0	any annotated donor/acceptor	FALSE	canonical	1	469	junction_1	112835.36899814746	NA	1	1	TRUE	NA	NA	NA	C	coding	646	1941	52	1992	20.0	0	True	ATTAAA	-21
PB.3264.22	chr13	+	2543	20	novel_not_in_catalog	ARHGEF7	novel	4361	19	NA	NA	-762	-2280	any annotated donor/acceptor	FALSE	canonical	1	5989	junction_1	109231.92226946041	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	269	2209	25.0	-1	True	TATAAA	-15
PB.11861.15	chr9	+	7362	32	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	6	455	combination_of_known_junctions	FALSE	canonical	1	158940	junction_1	155266.12968887968	NA	0	NA	TRUE	NA	NA	NA	C	coding	2228	6687	221	6907	75.0	-7	True	TTTAAA	-32
PB.7188.6	chr20	+	3765	11	novel_in_catalog	PET117	novel	1141	2	NA	NA	193	44874	no_combination_of_known_junctions	FALSE	canonical	1	17371	junction_1	56632.426607818954	NA	1	NA	TRUE	NA	NA	NA	B	coding	782	2349	833	3181	25.0	-42	True	NA	NA
PB.7188.5	chr20	+	3419	11	novel_in_catalog	PET117	novel	1141	2	NA	NA	17	44745	no_combination_of_known_junctions	FALSE	canonical	1	73406	junction_5	55987.81011300585	NA	1	NA	TRUE	NA	NA	NA	B	coding	782	2349	616	2964	10.0	-15	True	CATAAA	-15
PB.7188.4	chr20	+	3561	11	novel_in_catalog	PET117	novel	1141	2	NA	NA	3	44873	no_combination_of_known_junctions	FALSE	canonical	1	73406	junction_5	55987.81011300585	NA	0	NA	TRUE	NA	NA	NA	B	coding	782	2349	630	2978	20.0	3	True	NA	NA
PB.4563.3	chr16	+	3083	6	full-splice_match	MON1B	ENST00000248248.7	6091	6	247	2761	-26	8	multi-exon	FALSE	canonical	1	227058	junction_1	32746.962897954367	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	104	1747	55.0	-8278	False	AATAAA	-22
PB.4563.2	chr16	+	2218	6	full-splice_match	MON1B	ENST00000248248.7	6091	6	267	3606	-6	-95	multi-exon	FALSE	canonical	1	227058	junction_1	32746.962897954367	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	84	1727	15.0	-13	True	CATAAA	-23
PB.4563.1	chr16	+	3436	6	full-splice_match	MON1B	ENST00000248248.7	6091	6	280	2375	-1	394	multi-exon	FALSE	canonical	1	227058	junction_1	32746.962897954367	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	71	1714	70.0	0	True	NA	NA
PB.11861.12	chr9	+	9154	31	full-splice_match	PRRC2B	ENST00000405995.5	9157	31	-23	26	-23	0	multi-exon	FALSE	canonical	1	82105	junction_15	175388.12850337263	NA	0	NA	TRUE	NA	NA	NA	C	coding	1535	4608	250	4857	75.0	-36	True	NA	NA
PB.11080.5	chr8	-	3553	5	full-splice_match	FUT10	ENST00000327671.9	3825	5	263	9	-25	-9	multi-exon	FALSE	canonical	1	58070	junction_4	30736.177315990353	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	370	1809	45.0	-43	True	AATAAA	-45
PB.1131.1	chr1	+	3386	23	full-splice_match	IARS2	ENST00000366922.2	3560	23	167	7	167	-7	multi-exon	FALSE	canonical	1	519230	junction_2	143804.78579290822	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	165	2987	40.0	137	False	AATAAA	-11
PB.1131.3	chr1	+	4596	23	full-splice_match	IARS2	ENST00000366922.2	3560	23	6	-1042	6	1042	multi-exon	FALSE	canonical	1	519230	junction_2	143804.78579290822	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	110	3148	15.0	-24	True	ATTAAA	-19
PB.1131.2	chr1	+	4272	23	full-splice_match	IARS2	ENST00000366922.2	3560	23	2	-714	2	714	multi-exon	FALSE	canonical	1	519230	junction_2	143804.78579290822	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	114	3152	55.0	-28	True	AATAAA	-26
PB.10104.4	chr6	+	4025	7	full-splice_match	PM20D2	ENST00000275072.4	4708	7	40	643	40	-643	multi-exon	FALSE	canonical	1	92502	junction_1	62550.595770321976	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	56	1366	100.0	0	True	AATAAA	-23
PB.10104.5	chr6	+	4727	8	novel_not_in_catalog	PM20D2	novel	4708	7	NA	NA	30	-1	any annotated donor/acceptor	FALSE	canonical	1	13446	junction_1	97765.71236358474	NA	2	NA	TRUE	NA	NA	NA	C	coding	250	753	674	1426	15.0	-10	True	AATAAA	-15
PB.9722.8	chr6	+	3608	8	incomplete-splice_match	SNRNP48	ENST00000342415.5	4173	9	21	3173	-6	-412	3prime_fragment	FALSE	canonical	1	98596	junction_4	70988.6303466252	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	39	1019	25.0	-15	True	ATTAAA	-16
PB.10104.7	chr6	+	3609	7	full-splice_match	PM20D2	ENST00000275072.4	4708	7	62	1037	62	-1037	multi-exon	FALSE	canonical	1	92502	junction_1	62550.595770321976	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	34	1344	30.0	-8	True	ATTAAA	-19
PB.10104.1	chr6	+	4659	7	full-splice_match	PM20D2	ENST00000275072.4	4708	7	51	-2	51	2	multi-exon	FALSE	canonical	1	92502	junction_1	62550.595770321976	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	45	1355	20.0	11	True	AATAAA	-18
PB.10104.2	chr6	+	3850	7	full-splice_match	PM20D2	ENST00000275072.4	4708	7	55	803	55	-803	multi-exon	FALSE	canonical	1	92502	junction_1	62550.595770321976	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	41	1351	40.0	-15	False	AATAAA	-13
PB.10104.3	chr6	+	4040	8	novel_not_in_catalog	PM20D2	novel	4708	7	NA	NA	-25	-644	any annotated donor/acceptor	FALSE	canonical	1	1297	junction_7	90433.62605801008	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	121	1431	95.0	-10	True	AATAAA	-22
PB.4827.8	chr17	+	2451	10	full-splice_match	ALDH3A2	ENST00000176643.10	3928	10	240	1237	-12	-166	multi-exon	FALSE	canonical	1	516062	junction_1	111283.65284008293	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	207	1664	35.0	-12	True	TATAAA	-16
PB.4827.9	chr17	+	3802	11	full-splice_match	ALDH3A2	ENST00000339618.8	3828	11	25	1	-2	0	multi-exon	FALSE	canonical	1	56303	junction_10	254643.83133437575	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	197	1723	25.0	-2	True	TATAAA	-21
PB.3106.9	chr13	-	3036	10	novel_in_catalog	SPART	novel	4789	9	NA	NA	9	11	no_combination_of_known_junctions	FALSE	canonical	1	21718	junction_9	190983.1139117595	NA	2	NA	TRUE	NA	NA	NA	C	coding	666	2001	262	2262	10.0	-25	True	ATTAAA	-28
PB.3106.8	chr13	-	2871	9	full-splice_match	SPART	ENST00000438666.6	4789	9	-45	1963	-45	1	multi-exon	FALSE	canonical	1	138990	junction_8	127840.2251200082	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	107	2107	20.0	31	True	ATTAAA	-18
PB.3106.5	chr13	-	3529	9	full-splice_match	SPART	ENST00000451493.5	4944	9	34	1381	14	581	multi-exon	FALSE	canonical	1	113809	junction_8	135424.91500620372	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	185	2185	25.0	-20	True	AATAAA	-20
PB.3106.4	chr13	-	3560	10	novel_in_catalog	SPART	novel	4789	9	NA	NA	-81	582	no_combination_of_known_junctions	FALSE	canonical	1	8056	junction_9	193941.79501618203	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	215	2215	25.0	-5	True	AATAAA	-21
PB.3106.7	chr13	-	3344	9	full-splice_match	SPART	ENST00000438666.6	4789	9	-58	1503	-58	461	multi-exon	FALSE	canonical	1	138990	junction_8	127840.2251200082	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	120	2120	25.0	18	True	ATTAAA	-16
PB.3106.6	chr13	-	3514	10	novel_not_in_catalog	SPART	novel	4789	9	NA	NA	57	581	any annotated donor/acceptor	TRUE	canonical	1	586	junction_9	195580.45124616704	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	170	2170	25.0	-30	True	AATAAA	-20
PB.3106.1	chr13	-	4907	9	full-splice_match	SPART	ENST00000438666.6	4789	9	-121	3	89	-1	multi-exon	FALSE	canonical	1	138990	junction_8	127840.2251200082	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	183	2183	15.0	-45	True	NA	NA
PB.2267.3	chr11	+	2067	13	incomplete-splice_match	DDX10	ENST00000526794.1	6707	17	-68	198779	-15	47670	3prime_fragment	FALSE	canonical	1	28579	junction_2	50994.78447106135	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1965	101	2065	25.0	-15	True	AAAACA	-9
PB.3106.3	chr13	-	3448	9	full-splice_match	SPART	ENST00000438666.6	4789	9	-41	1382	-41	582	multi-exon	FALSE	canonical	1	138990	junction_8	127840.2251200082	NA	2	NA	TRUE	NA	NA	NA	C	coding	666	2001	103	2103	25.0	35	True	AATAAA	-21
PB.3106.2	chr13	-	4895	9	full-splice_match	SPART	ENST00000451493.5	4944	9	48	1	28	-1	multi-exon	FALSE	canonical	1	113809	junction_8	135424.91500620372	NA	20	NA	TRUE	NA	NA	NA	C	coding	666	2001	171	2171	15.0	-6	True	NA	NA
PB.9545.6	chr5	+	4188	22	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	34233	junction_11	169255.430487075	NA	2	NA	TRUE	NA	NA	NA	C	coding	1094	3285	39	3323	30.0	-21	True	AATAAA	-17
PB.8248.5	chr3	+	3464	7	novel_not_in_catalog	NSUN3	novel	3289	6	NA	NA	0	2010	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	47054.024229838426	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	138	1160	45.0	-71	True	TATAAA	-16
PB.2211.15	chr11	+	1911	10	incomplete-splice_match	TMEM135	ENST00000305494.5	2433	15	16	11726	16	-10735	3prime_fragment	FALSE	canonical	1	119635	junction_8	18735.725031192265	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	24	1001	85.0	-10	True	NA	NA
PB.2211.14	chr11	+	3051	15	full-splice_match	TMEM135	ENST00000305494.5	2433	15	-1	-617	-1	617	multi-exon	FALSE	canonical	1	119635	junction_8	21785.770534353614	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	41	1417	30.0	-27	True	AATAAA	-31
PB.2211.11	chr11	+	3895	15	full-splice_match	TMEM135	ENST00000305494.5	2433	15	-57	-1405	0	-3	multi-exon	FALSE	canonical	1	119635	junction_8	21785.770534353614	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	97	1473	35.0	16	True	AATAAA	-45
PB.2211.10	chr11	+	3042	14	full-splice_match	TMEM135	ENST00000340353.11	3938	14	105	791	-1	617	multi-exon	FALSE	canonical	1	19848	junction_4	41386.59941455194	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	98	1408	30.0	15	True	AATAAA	-31
PB.2211.13	chr11	+	2450	15	full-splice_match	TMEM135	ENST00000305494.5	2433	15	-22	5	0	-5	multi-exon	FALSE	canonical	1	119635	junction_8	21785.770534353614	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	62	1438	40.0	-89	False	TATAAA	-17
PB.2211.12	chr11	+	8946	15	full-splice_match	TMEM135	ENST00000305494.5	2433	15	-39	-6474	-17	5066	multi-exon	FALSE	canonical	1	119635	junction_8	21785.770534353614	NA	18	1	TRUE	NA	NA	NA	C	coding	458	1377	79	1455	15.0	-5	True	NA	NA
PB.4954.1	chr17	-	3207	4	full-splice_match	ORMDL3	ENST00000304046.6	2111	4	18	-1114	18	1114	multi-exon	FALSE	canonical	1	364453	junction_3	324757.0377282069	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	123	584	20.0	-13	True	NA	NA
PB.4954.3	chr17	-	2186	4	novel_in_catalog	ORMDL3	novel	2111	4	NA	NA	-165	0	intron_retention	FALSE	canonical	1	13676	junction_3	490052.43854464754	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	164	679	0.0	2309	False	AATAAA	-20
PB.4954.2	chr17	-	2103	4	full-splice_match	ORMDL3	ENST00000304046.6	2111	4	6	2	6	0	multi-exon	FALSE	canonical	1	364453	junction_3	324757.0377282069	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	135	596	0.0	5	True	AATAAA	-20
PB.11080.3	chr8	-	3012	4	novel_in_catalog	FUT10	novel	3825	5	NA	NA	-33	278	intron_retention	FALSE	canonical	1	9745	junction_1	23420.565839070205	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	378	884	20.0	37	False	AATAAA	-17
PB.9180.1	chr5	+	3906	10	full-splice_match	SLC1A3	ENST00000265113.8	4170	10	262	2	0	0	multi-exon	FALSE	canonical	1	264011	junction_5	51718.23527538425	NA	1	NA	TRUE	NA	NA	NA	A	coding	528	1587	257	1843	20.0	11	True	AATAAA	-21
PB.8583.1	chr3	-	2760	1	novel_in_catalog	DGKG	novel	5805	25	NA	NA	-41	17845	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	115	348	423	770	90.0	-1	True	NA	NA
PB.6325.11	chr2	+	3378	25	novel_in_catalog	DDX1	novel	2817	27	NA	NA	31	-1	intron_retention	FALSE	canonical	1	819723	junction_1	273751.61477818707	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	2121	3185	20.0	14	True	AATAAA	-12
PB.6325.10	chr2	+	3974	23	novel_in_catalog	DDX1	novel	2817	27	NA	NA	31	0	intron_retention	FALSE	canonical	1	819723	junction_1	280116.9729012166	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	53	1756	20.0	14	True	AATAAA	-13
PB.6325.13	chr2	+	2348	24	novel_in_catalog	DDX1	novel	2817	27	NA	NA	35	-1	no_combination_of_known_junctions	FALSE	canonical	1	1751	junction_1	368676.4127284284	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	209	2155	20.0	18	True	AATAAA	-12
PB.6325.12	chr2	+	1916	23	incomplete-splice_match	DDX1	ENST00000233084.7	2739	26	261	2281	31	92	3prime_fragment	FALSE	canonical	1	819723	junction_1	196343.4563732939	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1863	53	1915	55.0	14	True	NA	NA
PB.4837.1	chr17	-	7435	2	full-splice_match	C17orf51	ENST00000391411.10	7904	2	7	462	-2	-462	multi-exon	FALSE	canonical	1	87114	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	250	915	5.0	-3	True	GATAAA	-17
PB.4573.1	chr16	+	3810	28	novel_not_in_catalog	PLCG2	novel	912	6	NA	NA	28	273	intron_retention	TRUE	canonical	1	1326	junction_6	126154.79308971544	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	966	3515	25.0	-5	True	AATAAA	-17
PB.4837.3	chr17	-	5423	2	full-splice_match	C17orf51	ENST00000391411.10	7904	2	-5	2486	-3	1673	multi-exon	FALSE	canonical	1	87114	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	262	927	25.0	-15	True	NA	NA
PB.4837.2	chr17	-	6184	2	full-splice_match	C17orf51	ENST00000391411.10	7904	2	8	1712	-1	-1712	multi-exon	FALSE	canonical	1	87114	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	221	666	249	914	35.0	-2	True	AAAACA	-12
PB.4837.5	chr17	-	3608	2	full-splice_match	C17orf51	ENST00000391411.10	7904	2	-1	4297	1	0	multi-exon	FALSE	canonical	1	87114	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	258	923	30.0	-11	True	AATAAA	-15
PB.4837.4	chr17	-	3756	2	full-splice_match	C17orf51	ENST00000391411.10	7904	2	-1	4149	1	10	multi-exon	FALSE	canonical	1	87114	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	258	923	15.0	-11	True	AATAAA	-23
PB.4573.6	chr16	+	4260	33	full-splice_match	PLCG2	ENST00000564138.5	8707	33	49	4398	-35	275	multi-exon	FALSE	canonical	1	99459	junction_1	108207.94313416713	NA	3	NA	TRUE	NA	NA	NA	C	coding	1265	3798	166	3963	25.0	-8246	False	AATAAA	-19
PB.4573.7	chr16	+	3301	26	novel_not_in_catalog	PLCG2	novel	912	6	NA	NA	-22	273	intron_retention	FALSE	non_canonical	0	0	junction_22	117438.50171966602	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	153	2576	25.0	0	True	AATAAA	-17
PB.4573.8	chr16	+	4101	32	incomplete-splice_match	PLCG2	ENST00000564138.5	8707	33	6726	4398	-6	275	5prime_fragment	FALSE	canonical	1	123489	junction_1	102803.3619259701	NA	1	NA	TRUE	NA	NA	NA	C	coding	1265	3798	7	3804	25.0	-1569	False	AATAAA	-19
PB.4573.9	chr16	+	4140	32	novel_in_catalog	PLCG2	novel	912	6	NA	NA	280	276	intron_retention	FALSE	canonical	1	6085	junction_1	111742.07240443635	NA	3	NA	TRUE	NA	NA	NA	C	coding	1218	3657	186	3842	25.0	-76	False	AATAAA	-20
PB.61.1	chr1	+	2168	5	full-splice_match	VAMP3	ENST00000054666.10	2205	5	36	1	36	-1	multi-exon	FALSE	canonical	1	623767	junction_4	80121.10796787574	NA	0	NA	TRUE	NA	NA	NA	A	coding	100	303	80	382	10.0	9	True	AATAAA	-16
PB.11274.50	chr8	-	2611	14	incomplete-splice_match	PABPC1	ENST00000519004.5	2401	16	-1	1004	-1	11	intron_retention	FALSE	canonical	1	1799488	junction_7	1783819.1420690343	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	506	2416	35.0	-2	True	ATTAAA	-29
PB.6572.2	chr2	+	2207	8	full-splice_match	HTRA2	ENST00000258080.7	2370	8	-190	353	-190	-157	multi-exon	FALSE	canonical	1	299610	junction_1	115470.09670499641	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	821	2197	25.0	-1536	False	AATAGA	-6
PB.8170.11	chr3	+	2669	13	novel_in_catalog	GNL3	novel	547	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1036169	junction_5	361618.13811072404	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	722	1915	45.0	0	True	AATAAA	-19
PB.7329.10	chr20	-	3499	20	novel_not_in_catalog	ELMO2	novel	3669	22	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	120591.66518475993	NA	1	1	TRUE	NA	NA	NA	C	coding	632	1899	294	2192	25.0	-33	True	AATAAA	-16
PB.8170.10	chr3	+	2421	14	novel_in_catalog	GNL3	novel	547	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1036169	junction_5	365668.11965778365	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	1428	2204	45.0	0	True	AATAAA	-19
PB.4550.1	chr16	-	3072	9	novel_in_catalog	MLKL	novel	1781	6	NA	NA	127	0	intron_retention	TRUE	canonical	1	5475	junction_4	45542.58773098401	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	214	903	10.0	484	False	NA	NA
PB.11635.4	chr9	+	1620	9	novel_not_in_catalog	CTSL	novel	2177	8	NA	NA	44	0	any annotated donor/acceptor	FALSE	canonical	1	3173	junction_1	817123.6632373091	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	334	1335	10.0	-4831	False	AATAAA	-17
PB.4550.3	chr16	-	2392	12	novel_in_catalog	MLKL	novel	1781	6	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	25314	junction_11	34016.29276811261	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	331	1746	10.0	-59	True	NA	NA
PB.4550.2	chr16	-	2793	11	full-splice_match	MLKL	ENST00000308807.11	2523	11	-273	3	-227	-3	multi-exon	FALSE	canonical	1	101264	junction_7	18539.516308685077	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	738	2153	25.0	-40	False	NA	NA
PB.1111.10	chr1	-	3602	3	novel_in_catalog	TMEM206	novel	2475	8	NA	NA	38	3217	no_combination_of_known_junctions	FALSE	canonical	1	6099	junction_1	77318.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	101	604	85.0	28	True	NA	NA
PB.6821.1	chr2	-	2943	15	full-splice_match	FASTKD1	ENST00000453153.6	2967	15	31	-7	-10	7	multi-exon	TRUE	canonical	1	51887	junction_12	88010.88671376319	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	359	2860	35.0	1	True	AATAAA	-30
PB.9327.4	chr5	-	536	4	full-splice_match	RPS23	ENST00000296674.12	3437	4	193	2708	12	-6	multi-exon	FALSE	canonical	1	3362313	junction_1	9889564.370119117	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	62	493	40.0	14	False	AATAAA	-13
PB.9327.2	chr5	-	3176	5	novel_not_in_catalog	RPS23	novel	3437	4	NA	NA	14	41	intron_retention	FALSE	canonical	1	26747	junction_1	10469497.099987622	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	60	491	10.0	16	False	NA	NA
PB.8260.23	chr3	-	5411	16	full-splice_match	DCBLD2	ENST00000326840.10	6122	16	-45	756	-45	-756	multi-exon	FALSE	canonical	1	381028	junction_8	168364.61732627265	NA	2	NA	TRUE	NA	NA	NA	C	coding	775	2328	409	2736	20.0	272	False	ATTAAA	-34
PB.9327.1	chr5	-	3265	4	full-splice_match	RPS23	ENST00000296674.12	3437	4	215	-43	-7	43	multi-exon	FALSE	canonical	1	3362313	junction_1	9889564.370119117	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	40	471	10.0	-9	True	NA	NA
PB.8917.6	chr4	-	3011	2	incomplete-splice_match	TBCK	ENST00000394708.6	3047	26	50	259695	-7	-11109	3prime_fragment	FALSE	canonical	1	105216	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	18	False	NA	NA
PB.12293.9	chrX	-	5063	9	novel_in_catalog	RBMX	novel	837	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	87723	junction_6	140587.27368880156	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	156	1046	15.0	-1	True	AATAAA	-14
PB.8917.4	chr4	-	4430	25	novel_in_catalog	TBCK	novel	8101	27	NA	NA	8	1420	combination_of_known_junctions	FALSE	canonical	1	5242	junction_1	45537.34535544242	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	358	2604	10.0	-24	True	AATAAA	-13
PB.8917.5	chr4	-	3998	22	incomplete-splice_match	TBCK	ENST00000394708.6	3047	26	43	145422	7	-9639	3prime_fragment	FALSE	canonical	1	102145	junction_13	26250.408741618496	NA	32	1	TRUE	NA	NA	NA	C	coding	695	2088	323	2410	40.0	11	True	AATAAA	-24
PB.4027.10	chr15	-	1273	3	full-splice_match	MESD	ENST00000261758.5	4264	3	75	2916	-8	-2916	multi-exon	FALSE	canonical	1	744008	junction_2	80127.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	13	717	40.0	11	True	AATAGA	-15
PB.4027.11	chr15	-	4015	2	novel_not_in_catalog	MESD	novel	3978	5	NA	NA	1	-9918	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	114	345	28	372	100.0	-4	True	NA	NA
PB.7076.22	chr2	+	5079	29	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	0	-779	combination_of_known_junctions	FALSE	canonical	1	6209	junction_1	105809.35462559875	NA	9	NA	TRUE	NA	NA	NA	C	coding	1299	3900	211	4110	20.0	13	True	GATAAA	-29
PB.6089.5	chr19	-	4055	27	full-splice_match	SYMPK	ENST00000245934.11	4195	27	126	14	1	-1	multi-exon	FALSE	canonical	1	389458	junction_26	131743.6866096998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1274	3825	120	3944	60.0	-18	True	AATAAA	-16
PB.1073.6	chr1	+	3703	18	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	196	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	112015.16780375685	NA	5	2	TRUE	NA	NA	NA	C	coding	516	1551	652	2202	25.0	NA	False	AATAAA	-23
PB.11635.1	chr9	+	1386	8	full-splice_match	CTSL	ENST00000340342.10	1436	8	56	-6	25	0	multi-exon	FALSE	canonical	1	428351	junction_1	539332.5881978993	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	100	1101	10.0	-4850	False	AATAAA	-17
PB.6211.1	chr19	+	3510	13	full-splice_match	NLRP2	ENST00000448584.6	3573	13	63	0	0	0	multi-exon	FALSE	canonical	1	73566	junction_1	47885.62697633463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3189	80	3268	35.0	32	True	AATAAA	-21
PB.6089.7	chr19	-	4009	28	novel_not_in_catalog	SYMPK	novel	1603	10	NA	NA	1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	172597.75178135448	NA	11	1	TRUE	NA	NA	NA	C	coding	1259	3780	120	3899	55.0	-18	True	AATAAA	-15
PB.11635.2	chr9	+	1488	8	full-splice_match	CTSL	ENST00000343150.9	2177	8	690	-1	69	0	multi-exon	FALSE	canonical	1	372060	junction_1	557317.0881490891	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	201	1202	5.0	-4806	False	AATAAA	-18
PB.6821.6	chr2	-	2781	14	full-splice_match	FASTKD1	ENST00000453929.6	2791	14	10	0	10	0	multi-exon	FALSE	canonical	1	51887	junction_11	93016.66811717833	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	339	2711	55.0	21	True	AATAAA	-17
PB.5450.6	chr18	-	4164	6	novel_in_catalog	RPRD1A	novel	643	4	NA	NA	91	-7	intron_retention	FALSE	canonical	1	22620	junction_5	215998.34967184355	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	117	False	AATAAA	-18
PB.4966.1	chr17	-	5698	35	full-splice_match	TOP2A	ENST00000423485.5	5758	35	54	6	54	4	multi-exon	TRUE	canonical	1	528600	junction_31	246800.1764612858	NA	0	NA	TRUE	NA	NA	NA	C	coding	1531	4596	106	4701	40.0	-16	True	AATAAA	-22
PB.4966.6	chr17	-	4228	26	novel_not_in_catalog	TOP2A	novel	5758	35	NA	NA	66	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	259681.909158404	NA	1	NA	TRUE	NA	NA	NA	C	coding	1085	3258	94	3351	30.0	-4	True	AATAAA	-17
PB.5450.2	chr18	-	4490	8	full-splice_match	RPRD1A	ENST00000588737.5	1264	8	-10	-3216	7	0	multi-exon	FALSE	canonical	1	41261	junction_7	223848.2283681312	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	333	1163	15.0	-13	True	AATAAA	-25
PB.5450.1	chr18	-	4296	7	full-splice_match	RPRD1A	ENST00000399022.8	4438	7	142	0	96	0	multi-exon	FALSE	canonical	1	457933	junction_6	56402.309169631226	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	31	969	15.0	-1	True	AATAAA	-25
PB.10570.8	chr7	+	3523	3	novel_not_in_catalog	VKORC1L1	novel	6000	3	NA	NA	154	2065	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	163319.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	2	454	70.0	157	False	NA	NA
PB.83.2	chr1	+	5997	21	full-splice_match	KIF1B	ENST00000377093.8	7565	21	-272	1840	-272	0	multi-exon	FALSE	canonical	1	78376	junction_1	77544.32812630464	NA	0	NA	TRUE	NA	NA	NA	C	coding	1153	3462	426	3887	100.0	-12	True	NA	NA
PB.83.3	chr1	+	10500	46	novel_in_catalog	KIF1B	novel	7565	21	NA	NA	-272	1	no_combination_of_known_junctions	FALSE	canonical	1	78376	junction_1	65801.47658654688	NA	6	NA	TRUE	NA	NA	NA	C	coding	1687	5064	426	5489	25.0	-12	True	AATAAA	-17
PB.83.1	chr1	+	2380	20	incomplete-splice_match	KIF1B	ENST00000377093.8	7565	21	-298	11399	-298	4864	3prime_fragment	FALSE	canonical	1	78376	junction_1	75156.5932691385	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1929	452	2380	60.0	-5	True	NA	NA
PB.7076.23	chr2	+	2694	22	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	1	-57	combination_of_known_junctions	FALSE	canonical	1	35876	junction_2	102530.52746373115	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2469	226	2694	55.0	-24	False	NA	NA
PB.2978.3	chr12	+	3750	6	full-splice_match	BCL7A	ENST00000538010.5	6247	6	2495	2	31	-2	multi-exon	FALSE	canonical	1	29463	junction_5	78096.30227968543	NA	2	NA	TRUE	NA	NA	NA	C	coding	231	696	176	871	15.0	-8432	False	AATAAA	-15
PB.83.4	chr1	+	6064	21	novel_in_catalog	KIF1B	novel	7565	21	NA	NA	-261	0	combination_of_known_junctions	FALSE	canonical	1	35121	junction_12	88369.27118286084	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	415	3954	100.0	-1	True	NA	NA
PB.83.5	chr1	+	2297	19	incomplete-splice_match	KIF1B	ENST00000377093.8	7565	21	-260	11540	-260	4723	3prime_fragment	FALSE	canonical	1	78376	junction_1	75545.47331188459	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1884	414	2297	60.0	0	True	AAAACA	-14
PB.2978.2	chr12	+	3643	6	full-splice_match	BCL7A	ENST00000261822.4	2581	6	75	-1137	-17	-2	multi-exon	FALSE	canonical	1	108221	junction_5	48526.55669465947	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	132	764	15.0	-23	True	AATAAA	-15
PB.10570.5	chr7	+	4112	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	51	1732	-48	-1732	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	52	582	85.0	-45	False	NA	NA
PB.10704.21	chr7	+	5510	4	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	7	-26	no_combination_of_known_junctions	FALSE	canonical	1	26115	junction_2	34180.152320706045	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	791	3085	100.0	1	True	NA	NA
PB.10704.20	chr7	+	4294	4	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	7	-326	no_combination_of_known_junctions	FALSE	canonical	1	26115	junction_2	34180.152320706045	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	791	3085	15.0	1	True	NA	NA
PB.10704.22	chr7	+	4345	5	full-splice_match	ZKSCAN5	ENST00000454175.1	5626	5	39	1242	39	-326	multi-exon	FALSE	canonical	1	26272	junction_3	29579.82890733988	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	1529	3136	15.0	33	False	NA	NA
PB.8260.21	chr3	-	5658	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	7	-229	no_combination_of_known_junctions	FALSE	canonical	1	15297	junction_14	224176.9295024989	NA	4	NA	TRUE	NA	NA	NA	C	coding	699	2100	357	2456	30.0	12	True	AATAAA	-16
PB.10570.7	chr7	+	4806	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	73	1016	-26	-1016	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	30	560	20.0	-23	True	AATAAA	-19
PB.12293.2	chrX	-	2333	10	novel_in_catalog	RBMX	novel	837	3	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	87723	junction_7	143247.85655104628	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	162	1034	10.0	-7	True	AATAAA	-18
PB.1073.4	chr1	+	4985	22	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	159	-338	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	101706.93833256474	NA	5	1	TRUE	NA	NA	NA	C	coding	518	1557	689	2245	50.0	NA	False	ATTAAA	-28
PB.10570.1	chr7	+	2899	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	-11	3007	-11	1138	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	176	531	114	644	20.0	1	True	TATAAA	-7
PB.8771.10	chr4	+	2144	9	full-splice_match	OCIAD1	ENST00000381473.7	1594	9	66	-616	-3	-1	multi-exon	FALSE	canonical	1	302762	junction_1	469590.8709736061	NA	3	NA	TRUE	NA	NA	NA	C	coding	245	738	353	1090	40.0	1	True	AATAAA	-18
PB.6089.9	chr19	-	4073	27	novel_in_catalog	SYMPK	novel	1603	10	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	14786	junction_3	173684.39221207643	NA	0	NA	TRUE	NA	NA	NA	C	coding	1103	3312	103	3414	50.0	-1	True	AATAAA	-14
PB.6821.4	chr2	-	3674	15	novel_in_catalog	FASTKD1	novel	2967	15	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	8333	junction_14	96090.90927420167	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	1103	3604	55.0	-7	True	AATAAA	-17
PB.780.27	chr1	-	7028	14	novel_in_catalog	ADAR	novel	6610	15	NA	NA	16	3	intron_retention	FALSE	canonical	1	265041	junction_13	297561.32191057963	NA	2	NA	TRUE	NA	NA	NA	C	coding	1107	3324	227	3550	85.0	486	False	AATATA	-11
PB.93.1	chr1	+	1485	6	novel_not_in_catalog	FBXO6	novel	1520	6	NA	NA	-157	2	any annotated donor/acceptor	TRUE	canonical	1	17309	junction_1	87251.28168090139	NA	0	NA	TRUE	NA	NA	NA	A	coding	293	882	99	980	10.0	-7441	False	AATAAA	-17
PB.10489.1	chr7	+	3593	2	novel_in_catalog	GPR141	novel	823	4	NA	NA	-30	2460	no_combination_of_known_junctions	FALSE	canonical	1	1928	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	305	918	153	1070	5.0	-18	True	AATAAA	-13
PB.1291.8	chr10	-	3122	14	full-splice_match	USP6NL	ENST00000277575.5	4512	14	-154	1544	-154	-1544	multi-exon	FALSE	canonical	1	1095	junction_13	37774.43246915648	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	198	2735	20.0	-3	False	AATAGA	-14
PB.1291.9	chr10	-	2980	3	full-splice_match	USP6NL	ENST00000606752.1	1823	3	11	-1168	11	228	multi-exon	FALSE	canonical	1	2073	junction_1	50446.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	125	False	NA	NA
PB.7489.1	chr21	-	1547	5	full-splice_match	MIS18A	ENST00000290130.3	1575	5	32	-4	32	4	multi-exon	FALSE	canonical	1	281918	junction_4	58054.95196148215	NA	0	NA	TRUE	NA	NA	NA	A	coding	170	513	213	725	35.0	-12	True	AATAAA	-26
PB.8500.1	chr3	+	3109	1	antisense	novelGene_KPNA4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	AAAAAG	-17
PB.6821.5	chr2	-	2931	14	novel_in_catalog	FASTKD1	novel	2967	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	24276	junction_12	88969.33645885526	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	429	2861	55.0	-6	True	AATAAA	-17
PB.2236.12	chr11	-	2440	11	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	5	-246	combination_of_known_junctions	FALSE	canonical	1	25804	junction_10	100729.36685301858	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	NA	NA
PB.2236.13	chr11	-	2010	11	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	6	-675	combination_of_known_junctions	FALSE	canonical	1	25804	junction_10	100729.36685301858	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-1	True	AATAAA	-12
PB.2236.10	chr11	-	2903	9	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	50	-245	intron_retention	FALSE	canonical	1	114101	junction_8	65205.771127710585	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	34	729	35.0	-11	True	NA	NA
PB.2236.11	chr11	-	2370	10	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	18	-245	combination_of_known_junctions	FALSE	canonical	1	25804	junction_9	87129.85433120944	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	11	True	NA	NA
PB.674.7	chr1	+	2040	16	novel_in_catalog	POLR3C	novel	1186	10	NA	NA	8	257	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	445	1698	10.0	-35	True	NA	NA
PB.402.29	chr1	+	3375	19	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	-6	-67	intron_retention	FALSE	canonical	1	130786	junction_1	243617.21464729492	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	452	1903	40.0	-6	True	ATTAAA	-17
PB.6489.22	chr2	-	4639	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	5	NA	TRUE	NA	NA	NA	C	coding	1067	3204	551	3754	20.0	-1	True	AATAAA	-15
PB.8051.5	chr3	+	1408	7	full-splice_match	ABHD5	ENST00000644371.1	5366	7	32	3926	2	2	multi-exon	FALSE	canonical	1	201999	junction_2	73171.42568140927	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	92	1141	45.0	-4	True	AATAAA	-19
PB.954.3	chr1	-	2762	20	full-splice_match	COP1	ENST00000367669.7	3033	20	228	43	-182	-21	multi-exon	FALSE	canonical	1	99678	junction_13	105336.36182723053	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	288	2483	80.0	-22	True	NA	NA
PB.9669.1	chr5	+	2105	9	novel_in_catalog	SQSTM1	novel	921	3	NA	NA	-24	-2	combination_of_known_junctions	TRUE	canonical	1	61178	junction_1	2227097.5406980803	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	375	1445	35.0	-3289	False	ATTAAA	-21
PB.9669.3	chr5	+	2800	9	novel_not_in_catalog	SQSTM1	novel	921	3	NA	NA	-288	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	2553385.570541688	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	245	1318	35.0	27	True	AATAAA	-19
PB.9669.2	chr5	+	1983	9	novel_not_in_catalog	SQSTM1	novel	921	3	NA	NA	-297	-3	any annotated donor/acceptor	FALSE	canonical	1	61342	junction_1	2227063.584859318	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	254	1324	35.0	18	True	ATTAAA	-20
PB.9669.5	chr5	+	3831	7	full-splice_match	SQSTM1	ENST00000360718.5	2253	7	-1581	3	-1	-3	multi-exon	FALSE	canonical	1	3195594	junction_1	825887.1106990888	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	2102	3172	35.0	-1	True	ATTAAA	-20
PB.9669.4	chr5	+	3088	8	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	-9	-3	any annotated donor/acceptor	FALSE	canonical	1	33236	junction_5	1867982.8997181503	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	42	965	35.0	-3288	False	ATTAAA	-20
PB.9669.7	chr5	+	2355	7	novel_in_catalog	SQSTM1	novel	842	6	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	2631348	junction_1	1148216.122543671	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	34	1047	35.0	-1	True	ATTAAA	-20
PB.9669.6	chr5	+	3029	8	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	23909	junction_6	1890322.635892819	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	34	1047	35.0	-1	True	AATAAA	-19
PB.9669.9	chr5	+	4667	7	incomplete-splice_match	SQSTM1	ENST00000389805.8	2986	8	146	826	0	-3	intron_retention	FALSE	canonical	1	2631348	junction_1	1191112.2915063815	NA	3	NA	TRUE	NA	NA	NA	C	coding	390	1173	33	1205	35.0	0	True	ATTAAA	-20
PB.9669.8	chr5	+	7306	6	incomplete-splice_match	SQSTM1	ENST00000360718.5	2253	7	-1580	-820	0	-3	intron_retention	FALSE	canonical	1	3195594	junction_1	902199.7316757304	NA	8	NA	TRUE	NA	NA	NA	C	coding	306	921	2101	3021	35.0	0	True	AATAAA	-19
PB.871.3	chr1	+	2169	13	full-splice_match	USP21	ENST00000289865.12	2195	13	17	9	17	0	multi-exon	FALSE	non_canonical	0	0	junction_10	89563.28228161111	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	205	1902	50.0	-4	True	AATAAA	-7
PB.1073.3	chr1	+	3183	3	full-splice_match	SRGAP2	ENST00000579225.2	1108	3	157	-2232	156	2232	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	10	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATGAA	-14
PB.1753.1	chr11	+	2026	9	incomplete-splice_match	PNPLA2	ENST00000336615.8	2428	10	660	357	660	-2	5prime_fragment	FALSE	canonical	1	697992	junction_1	305880.3248866295	NA	1	NA	TRUE	NA	NA	NA	A	coding	504	1515	158	1672	10.0	-10004	False	AATAAA	-12
PB.9335.4	chr5	+	2292	4	novel_not_in_catalog	TMEM161B-AS1	novel	833	2	NA	NA	0	-1368	intron_retention	FALSE	canonical	1	15892	junction_3	38260.99429212762	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	26	True	NA	NA
PB.9335.3	chr5	+	1843	2	full-splice_match	TMEM161B-AS1	ENST00000504636.1	1039	2	-10	-794	-5	-1	multi-exon	FALSE	canonical	1	29958	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	10	True	ATTAAA	-17
PB.9335.2	chr5	+	1691	5	novel_in_catalog	TMEM161B-AS1	novel	833	2	NA	NA	2	-596	combination_of_known_junctions	FALSE	canonical	1	39575	junction_4	27845.779976506314	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	2	True	NA	NA
PB.9335.1	chr5	+	3784	2	full-splice_match	TMEM161B-AS1	ENST00000504636.1	1039	2	-18	-2727	2	1932	multi-exon	FALSE	canonical	1	29958	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	2	True	NA	NA
PB.11487.1	chr9	-	2689	1	intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-2627	False	ACTAAA	-24
PB.8051.4	chr3	+	3309	7	full-splice_match	ABHD5	ENST00000644371.1	5366	7	27	2030	-3	-116	multi-exon	FALSE	canonical	1	201999	junction_2	73171.42568140927	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	97	1146	35.0	-9	True	AATAAA	-20
PB.8322.1	chr3	+	1548	10	full-splice_match	PLA1A	ENST00000488919.5	1456	10	5	-97	5	2	multi-exon	FALSE	canonical	1	6215	junction_1	39120.91010864133	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	352	1203	30.0	-5	True	AATAAA	-22
PB.564.1	chr1	+	3041	11	full-splice_match	TRMT13	ENST00000370141.6	3129	11	-7	95	6	-95	multi-exon	FALSE	canonical	1	84355	junction_9	38435.371587770554	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	107	1459	30.0	-7	True	ATTAAA	-14
PB.8322.2	chr3	+	1745	11	full-splice_match	PLA1A	ENST00000273371.8	1786	11	38	3	5	-3	multi-exon	TRUE	canonical	1	54651	junction_1	28295.03328925414	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	35	1405	30.0	-5	True	AATAAA	-17
PB.6327.7	chr2	+	5308	14	full-splice_match	GEN1	ENST00000381254.6	6367	14	-8	1067	-8	-1067	multi-exon	FALSE	canonical	1	18902	junction_1	29853.64133578879	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	223	2949	60.0	-11	True	NA	NA
PB.8322.3	chr3	+	1583	8	incomplete-splice_match	PLA1A	ENST00000273371.8	1786	11	43	9617	0	1	3prime_fragment	FALSE	canonical	1	54651	junction_1	19453.998712819106	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	30	1049	35.0	0	True	AGTAAA	-28
PB.10031.1	chr6	+	2534	3	novel_in_catalog	TRAM2-AS1	novel	2453	3	NA	NA	-55	3	intron_retention	FALSE	canonical	1	38675	junction_1	11318.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1886	False	NA	NA
PB.2618.1	chr12	+	4569	9	full-splice_match	ACVR1B	ENST00000257963.8	4563	9	-5	-1	-5	1	multi-exon	FALSE	canonical	1	48117	junction_1	46918.61624914331	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	83	1600	5.0	-41	False	ATTAAA	-17
PB.2618.2	chr12	+	3171	9	full-splice_match	ACVR1B	ENST00000257963.8	4563	9	3	1389	3	764	multi-exon	FALSE	canonical	1	48117	junction_1	46918.61624914331	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	75	1592	70.0	-33	True	AAGAAA	-6
PB.6601.11	chr2	-	2120	7	full-splice_match	ST3GAL5	ENST00000377332.8	2165	7	-30	75	0	19	multi-exon	FALSE	canonical	1	4088	junction_4	72264.59548250443	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	168	1220	55.0	-3	True	TATAAA	-11
PB.31.19	chr1	-	2503	13	novel_not_in_catalog	GNB1	novel	3145	11	NA	NA	-13	-530	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	1366504.5283961333	NA	2	1	TRUE	NA	NA	NA	C	coding	340	1023	234	1256	60.0	-61	True	NA	NA
PB.6520.1	chr2	-	2749	4	novel_not_in_catalog	FBXO48	novel	5666	4	NA	NA	-36	-2956	any annotated donor/acceptor	FALSE	canonical	1	20881	junction_2	9775.783083154458	NA	7	NA	TRUE	NA	NA	NA	A	coding	155	468	448	915	80.0	-1	True	NA	NA
PB.11441.8	chr9	+	4265	7	novel_not_in_catalog	PDCD1LG2	novel	2365	7	NA	NA	6459	2036	any annotated donor/acceptor	FALSE	canonical	1	5257	junction_1	26411.669185019127	NA	3	NA	TRUE	NA	NA	NA	C	coding	304	915	46	960	75.0	-14	True	NA	NA
PB.6489.20	chr2	-	4710	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-13	0	intron_retention	FALSE	canonical	1	3143	junction_1	374147.8708689462	NA	2	NA	TRUE	NA	NA	NA	C	coding	1003	3012	719	3730	20.0	-16	True	AATAAA	-15
PB.31.10	chr1	-	3207	14	novel_not_in_catalog	GNB1	novel	3145	11	NA	NA	-19	-2	any annotated donor/acceptor	FALSE	canonical	1	3254	junction_13	1658696.3469008072	NA	4	NA	TRUE	NA	NA	NA	C	coding	340	1023	410	1432	15.0	1333	False	AATAAA	-17
PB.8051.7	chr3	+	3816	7	full-splice_match	ABHD5	ENST00000644371.1	5366	7	65	1485	-16	429	multi-exon	FALSE	canonical	1	201999	junction_2	73171.42568140927	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	59	1108	75.0	-3	True	NA	NA
PB.6821.8	chr2	-	2692	13	novel_in_catalog	FASTKD1	novel	2967	15	NA	NA	11	0	no_combination_of_known_junctions	FALSE	canonical	1	4266	junction_4	102935.18989136914	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	379	2622	55.0	0	True	AATAAA	-17
PB.31.14	chr1	-	3170	14	novel_not_in_catalog	GNB1	novel	3145	11	NA	NA	-26	-4	any annotated donor/acceptor	FALSE	canonical	1	3254	junction_13	1665643.5337608124	NA	5	1	TRUE	NA	NA	NA	C	coding	340	1023	375	1397	10.0	1326	False	AATAAA	-15
PB.31.17	chr1	-	3223	11	novel_in_catalog	GNB1	novel	3145	11	NA	NA	-49	-6	intron_retention	FALSE	canonical	1	962085	junction_10	996258.2184707386	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	162	1184	15.0	868	False	AATAAA	-13
PB.564.4	chr1	+	3464	10	novel_in_catalog	TRMT13	novel	476	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	84355	junction_8	36802.61105706066	NA	2	1	TRUE	NA	NA	NA	C	coding	212	639	1151	1789	25.0	0	True	AATAAA	-17
PB.11497.2	chr9	-	1998	8	novel_in_catalog	APTX	novel	2023	8	NA	NA	-2	4	combination_of_known_junctions	TRUE	canonical	1	16810	junction_1	153257.75112601672	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	6	926	15.0	18	True	AATAAA	-18
PB.11497.3	chr9	-	1925	8	novel_not_in_catalog	APTX	novel	2023	8	NA	NA	0	4	any annotated donor/acceptor	FALSE	canonical	1	14464	junction_7	195130.53572615312	NA	11	1	TRUE	NA	NA	NA	C	coding	287	864	176	1039	15.0	-1	True	AATAAA	-18
PB.277.5	chr1	-	3688	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	4	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	1660967.9818515347	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	96	2165	20.0	0	True	CATAAA	-17
PB.3007.1	chr12	-	6560	30	novel_in_catalog	NCOR2	novel	8533	47	NA	NA	-13	3	combination_of_known_junctions	TRUE	canonical	1	53283	junction_29	205915.51365625337	NA	4	NA	TRUE	NA	NA	NA	B	coding	1820	5463	108	5570	25.0	-14	True	ATTAAA	-21
PB.11497.7	chr9	-	2159	8	full-splice_match	APTX	ENST00000494649.5	2099	8	-66	6	-8	-4	multi-exon	FALSE	canonical	1	5203	junction_7	158342.55733590218	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	519	1283	35.0	40	True	AATAAA	-8
PB.11497.4	chr9	-	1854	8	novel_in_catalog	APTX	novel	2023	8	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	1	92128	junction_7	151897.42956672964	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	479	970	10.0	4	True	AATAAA	-16
PB.2326.1	chr11	+	1767	4	full-splice_match	OAF	ENST00000328965.8	2525	4	365	393	-169	-393	multi-exon	FALSE	canonical	1	349683	junction_1	33035.98874964494	NA	0	NA	TRUE	NA	NA	NA	A	coding	273	822	149	970	35.0	100	False	AATAAA	-19
PB.11497.8	chr9	-	2025	8	novel_in_catalog	APTX	novel	2023	8	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	16399	junction_7	155377.20737375	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	385	1149	35.0	-19	True	AATAAA	-8
PB.11497.9	chr9	-	2027	8	novel_not_in_catalog	APTX	novel	2023	8	NA	NA	28	-4	any annotated donor/acceptor	FALSE	canonical	1	1621	junction_7	151425.32749732942	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	126	1151	35.0	-39	True	AATAAA	-8
PB.1073.1	chr1	+	5237	22	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	147	-101	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	101144.58525294831	NA	6	1	TRUE	NA	NA	NA	C	coding	519	1560	701	2260	20.0	NA	False	ATTAAA	-13
PB.10944.3	chr7	+	1422	1	full-splice_match	PAXIP1-AS1	ENST00000608317.1	2256	1	-1	835	-1	-835	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-7	True	AATATA	-22
PB.8667.4	chr4	+	4991	13	full-splice_match	SH3BP2	ENST00000452765.6	2265	13	21	-2747	21	2747	multi-exon	FALSE	canonical	1	44508	junction_1	104766.74475418661	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	100	1785	25.0	0	True	AATAAA	-14
PB.3927.7	chr15	+	3432	16	novel_not_in_catalog	AC069368.1	novel	1178	6	NA	NA	52936	27764	any annotated donor/acceptor	FALSE	canonical	1	817	junction_1	14039.115520414936	NA	1	NA	TRUE	NA	NA	NA	A	coding	484	1455	178	1632	45.0	0	True	AATAAA	-13
PB.3927.4	chr15	+	3550	6	novel_not_in_catalog	PLEKHO2	novel	3569	5	NA	NA	28	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	131131.6992269985	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	101	1438	25.0	2	True	AATAAA	-14
PB.3927.5	chr15	+	2895	3	novel_not_in_catalog	PLEKHO2	novel	3569	5	NA	NA	38	0	any annotated donor/acceptor	FALSE	canonical	1	69	junction_2	60770.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	91	783	25.0	-18	False	AATAAA	-14
PB.3927.2	chr15	+	2919	3	novel_not_in_catalog	PLEKHO2	novel	3569	5	NA	NA	24	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	60804.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	307	807	25.0	-2	True	AATAAA	-14
PB.3927.3	chr15	+	3192	17	novel_in_catalog	PLEKHO2	novel	3569	5	NA	NA	26	90486	no_combination_of_known_junctions	FALSE	canonical	1	4187	junction_5	125515.33210771254	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	103	1887	75.0	0	True	NA	NA
PB.8667.2	chr4	+	2255	13	full-splice_match	SH3BP2	ENST00000452765.6	2265	13	6	4	6	0	multi-exon	FALSE	canonical	1	44508	junction_1	104766.74475418661	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	115	1800	5.0	-15	True	AATAAA	-18
PB.3927.1	chr15	+	3690	6	full-splice_match	PLEKHO2	ENST00000323544.4	3720	6	23	7	23	0	multi-exon	FALSE	canonical	1	121609	junction_1	91218.58892703833	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	106	1578	25.0	-3	True	AATAAA	-14
PB.6821.9	chr2	-	2586	13	incomplete-splice_match	FASTKD1	ENST00000453153.6	2967	15	-31	1722	-29	-1639	3prime_fragment	FALSE	canonical	1	51887	junction_10	67678.90101058084	NA	3	NA	TRUE	NA	NA	NA	C	coding	722	2166	421	2586	55.0	2	True	NA	NA
PB.6998.19	chr2	-	5450	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-22	787	-22	-787	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	3	NA	TRUE	NA	NA	NA	C	coding	272	819	773	1591	20.0	-1	True	ACTAAA	-11
PB.6998.18	chr2	-	5555	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-22	682	-22	-682	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	773	1591	10.0	-1	True	NA	NA
PB.8667.8	chr4	+	5124	13	full-splice_match	SH3BP2	ENST00000435136.6	2318	13	-54	-2752	31	2747	multi-exon	FALSE	canonical	1	46157	junction_1	104443.43254295201	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	206	1918	25.0	-5938	False	AATAAA	-14
PB.8667.9	chr4	+	5501	12	novel_in_catalog	SH3BP2	novel	2265	13	NA	NA	-22	2747	intron_retention	FALSE	canonical	1	46157	junction_1	108614.55183193868	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	973	2295	25.0	-4	True	AATAAA	-14
PB.9329.1	chr5	+	1566	8	full-splice_match	XRCC4	ENST00000338635.10	1579	8	60	-47	-6	0	multi-exon	FALSE	canonical	1	61541	junction_1	41331.96256098732	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	40	1050	30.0	-6	True	AATAAA	-16
PB.9329.2	chr5	+	2368	7	incomplete-splice_match	XRCC4	ENST00000542685.5	1243	8	31	50955	-5	775	3prime_fragment	FALSE	canonical	1	61541	junction_1	41522.669637266285	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	39	935	15.0	-5	True	AATATA	-22
PB.9329.3	chr5	+	1602	8	full-splice_match	XRCC4	ENST00000511817.1	1636	8	5	29	5	0	multi-exon	FALSE	canonical	1	13721	junction_1	55013.63616636241	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	76	1086	30.0	5	True	AATAAA	-16
PB.3628.6	chr14	+	2837	13	full-splice_match	GOLGA5	ENST00000163416.6	2969	13	96	36	96	-36	multi-exon	FALSE	canonical	1	149401	junction_1	103767.76141257162	NA	2	NA	TRUE	NA	NA	NA	C	coding	731	2196	161	2356	70.0	-1	True	TATAAA	-6
PB.2705.14	chr12	+	3188	5	full-splice_match	DTX3	ENST00000548198.5	3199	5	9	2	-1	1	multi-exon	FALSE	canonical	1	323892	junction_2	67750.53764131691	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	1517	2539	15.0	9	True	AATAAA	-24
PB.2705.13	chr12	+	1866	6	full-splice_match	DTX3	ENST00000548804.5	2067	6	204	-3	2	0	multi-exon	FALSE	canonical	1	49529	junction_1	155885.6474491478	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	193	1215	15.0	2	True	AATAAA	-26
PB.2705.12	chr12	+	2717	6	novel_in_catalog	DTX3	novel	2067	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	72849	junction_3	157257.702622924	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	1017	2069	15.0	2	True	AATAAA	-23
PB.2705.11	chr12	+	2295	8	novel_in_catalog	DTX3	novel	2067	6	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	4491	junction_2	202347.9851265525	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	624	1646	15.0	0	True	AATAAA	-24
PB.2705.10	chr12	+	3077	5	novel_in_catalog	DTX3	novel	2067	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	206657	junction_1	81876.3613638729	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	1068	2201	15.0	0	True	AATAAA	-23
PB.11633.10	chr9	+	4206	26	novel_not_in_catalog	DAPK1	novel	5743	26	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	4091	junction_25	54057.286374748786	NA	0	NA	TRUE	NA	NA	NA	C	coding	1070	3213	350	3562	20.0	-5	True	AATAAA	-18
PB.6489.26	chr2	-	4550	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-65	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	2	NA	TRUE	NA	NA	NA	C	coding	1067	3204	462	3665	20.0	0	True	AATAAA	-15
PB.11633.12	chr9	+	5818	25	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	4867	junction_10	54929.95291145048	NA	0	NA	TRUE	NA	NA	NA	C	coding	1399	4200	350	4549	20.0	-5	True	AATAAA	-18
PB.11633.13	chr9	+	5772	25	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	3097	junction_3	54675.50901429471	NA	2	NA	TRUE	NA	NA	NA	C	coding	1285	3858	646	4503	20.0	-5	True	AATAAA	-18
PB.11633.14	chr9	+	5688	26	full-splice_match	DAPK1	ENST00000408954.7	5892	26	-14	218	-14	-218	multi-exon	FALSE	canonical	1	112699	junction_1	35754.474926957046	NA	0	NA	TRUE	NA	NA	NA	C	coding	1430	4293	350	4642	30.0	-5	True	AATAAA	-22
PB.11633.15	chr9	+	2652	19	incomplete-splice_match	DAPK1	ENST00000408954.7	5892	26	-14	39652	-14	28	3prime_fragment	FALSE	canonical	1	112699	junction_1	36963.69219811066	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	350	2509	5.0	-5	True	AATAAA	-36
PB.11633.16	chr9	+	2521	19	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	-14	-21	combination_of_known_junctions	FALSE	canonical	1	660	junction_18	58495.82875961918	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	350	2275	70.0	-5	True	NA	NA
PB.11633.17	chr9	+	6351	26	full-splice_match	DAPK1	ENST00000408954.7	5892	26	-13	-446	-13	441	multi-exon	FALSE	canonical	1	112699	junction_1	35754.474926957046	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	349	4641	50.0	-4	True	AATAAA	-15
PB.11633.18	chr9	+	3275	19	incomplete-splice_match	DAPK1	ENST00000408954.7	5892	26	-12	39027	-12	653	3prime_fragment	FALSE	canonical	1	112699	junction_1	36963.69219811066	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	348	2507	30.0	-3	True	AATAAA	-19
PB.11633.19	chr9	+	5846	27	novel_not_in_catalog	DAPK1	novel	5743	26	NA	NA	-12	21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	53634.983354958604	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	264	4556	30.0	-3	True	AATAAA	-39
PB.3628.5	chr14	+	2670	13	novel_not_in_catalog	GOLGA5	novel	2969	13	NA	NA	79	28	any annotated donor/acceptor	FALSE	canonical	1	3928	junction_9	135735.58970435458	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	178	2292	20.0	-18	True	AATAAA	-13
PB.3776.4	chr15	+	3397	11	novel_in_catalog	IVD	novel	668	5	NA	NA	0	-850	combination_of_known_junctions	FALSE	canonical	1	14926	junction_7	155073.01186009127	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	34	864	30.0	0	True	ATTAAA	-19
PB.3776.5	chr15	+	2166	12	full-splice_match	IVD	ENST00000487418.6	1809	12	9	-366	9	-24	multi-exon	FALSE	canonical	1	286288	junction_1	77544.84350606534	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	25	1296	85.0	9	True	NA	NA
PB.1234.34	chr1	-	2582	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-437	18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	107276.43192940438	NA	0	NA	TRUE	NA	NA	NA	B	coding	598	1794	788	2581	60.0	-1	True	NA	NA
PB.6990.139	chr2	-	2639	13	full-splice_match	FN1	ENST00000426059.1	2388	13	5	-256	0	256	multi-exon	FALSE	canonical	1	7013395	junction_12	1107057.4946712814	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	267	2240	25.0	-1	True	AATATA	-16
PB.277.9	chr1	-	2935	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	3	-670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	1660967.9818515347	NA	12	1	TRUE	NA	NA	NA	C	coding	496	1491	591	2081	30.0	-1	True	ATTAAA	-14
PB.6990.138	chr2	-	4165	13	full-splice_match	FN1	ENST00000426059.1	2388	13	6	-1783	0	1783	multi-exon	FALSE	canonical	1	7013395	junction_12	1107057.4946712814	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	266	2239	45.0	0	True	AATAAA	-18
PB.5271.10	chr17	-	3579	19	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	2791	junction_18	48007.478122208435	NA	0	NA	TRUE	NA	NA	NA	B	coding	827	2484	361	2844	25.0	8220	False	ATTAAA	-16
PB.5271.11	chr17	-	4632	1	novel_in_catalog	RHBDF2	novel	3599	19	NA	NA	1	-9369	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	112	339	4115	4453	90.0	11	True	NA	NA
PB.5271.12	chr17	-	4441	1	novel_in_catalog	RHBDF2	novel	3582	19	NA	NA	0	-9533	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	174	525	3	527	70.0	38	True	NA	NA
PB.3804.9	chr15	-	2201	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-21	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	217460.92974657257	NA	0	NA	TRUE	NA	NA	NA	B	coding	414	1245	406	1650	90.0	-35	True	AAAAAG	-41
PB.6890.15	chr2	+	4425	7	incomplete-splice_match	ITGAV	ENST00000433736.6	3288	30	67465	-3455	22	-1	5prime_fragment	FALSE	canonical	1	541363	junction_4	91902.78274894618	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	144	821	15.0	-10134	False	AATAAA	-14
PB.3804.2	chr15	-	2947	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-69	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	215542.58581117142	NA	1	NA	TRUE	NA	NA	NA	B	coding	414	1245	539	1783	55.0	312	False	TATAAA	-3
PB.3804.3	chr15	-	4624	19	novel_in_catalog	TMEM87A	novel	3049	19	NA	NA	0	-18	intron_retention	FALSE	canonical	1	325884	junction_18	156615.43238238365	NA	12	2	TRUE	NA	NA	NA	B	coding	409	1230	35	1264	90.0	-18	True	AAAAAG	-41
PB.10830.21	chr7	+	2194	9	novel_not_in_catalog	IRF5	novel	2988	9	NA	NA	50	-9	any annotated donor/acceptor	FALSE	canonical	1	28	junction_5	119201.77252660455	NA	4	1	TRUE	NA	NA	NA	C	coding	255	768	866	1633	40.0	-1456	False	AATGAA	-5
PB.3804.1	chr15	-	2884	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-6	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	191024.64184223174	NA	2	NA	TRUE	NA	NA	NA	B	coding	555	1668	45	1712	35.0	17	False	TATAAA	-11
PB.6839.1	chr2	+	5651	25	full-splice_match	ITGA6	ENST00000409080.5	5306	25	-174	-171	60	171	multi-exon	FALSE	canonical	1	216744	junction_24	121940.28430165196	NA	14	1	TRUE	NA	NA	NA	C	coding	1091	3276	175	3450	25.0	-65	False	ATTAAA	-26
PB.3804.7	chr15	-	2196	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	22	-65	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	215542.58581117142	NA	0	NA	TRUE	NA	NA	NA	B	coding	414	1245	448	1692	35.0	8	True	NA	NA
PB.10830.25	chr7	+	2928	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	433	1	intron_retention	FALSE	canonical	1	7470	junction_1	104313.6737896811	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	166	1710	10.0	3	True	NA	NA
PB.3804.5	chr15	-	2241	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-31	-65	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	191024.64184223174	NA	0	NA	TRUE	NA	NA	NA	B	coding	555	1668	70	1737	35.0	-8	False	NA	NA
PB.6990.135	chr2	-	4974	28	incomplete-splice_match	FN1	ENST00000356005.8	7846	44	0	23742	0	-2449	3prime_fragment	FALSE	canonical	1	7013395	junction_27	1046046.4028647261	NA	0	NA	TRUE	NA	NA	NA	C	coding	1495	4488	267	4754	35.0	-1	True	AATAAA	-17
PB.1234.33	chr1	-	1844	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-24	91	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	122651.49111207954	NA	0	NA	TRUE	NA	NA	NA	B	coding	589	1767	77	1843	55.0	-9	True	AAGAAA	-19
PB.5305.8	chr17	+	5084	22	incomplete-splice_match	RNF213	ENST00000582970.5	21055	68	2779	61886	2777	0	internal_fragment	FALSE	canonical	1	195049	junction_16	146784.23266475045	NA	0	NA	TRUE	NA	NA	NA	C	coding	1550	4653	36	4688	85.0	0	True	NA	NA
PB.6990.134	chr2	-	5290	31	incomplete-splice_match	FN1	ENST00000432072.6	7759	45	-1	22489	0	-1195	3prime_fragment	FALSE	canonical	1	2230192	junction_6	2031832.7951838523	NA	0	NA	TRUE	NA	NA	NA	C	coding	1674	5022	267	5288	60.0	-1	True	NA	NA
PB.5305.6	chr17	+	4786	17	novel_not_in_catalog	RNF213	novel	17730	69	NA	NA	2774	4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	148268.22295231538	NA	1	1	TRUE	NA	NA	NA	C	coding	1063	3192	39	3230	25.0	-3	True	NA	NA
PB.11431.1	chr9	-	4756	6	novel_not_in_catalog	GLIS3	novel	6667	10	NA	NA	5121	-358	any annotated donor/acceptor	FALSE	canonical	1	593	junction_5	17317.91326228423	NA	5	NA	TRUE	NA	NA	NA	A	coding	287	864	106	969	40.0	NA	False	AATAAA	-6
PB.5305.4	chr17	+	4011	17	novel_not_in_catalog	RNF213	novel	17730	69	NA	NA	-12	-1233	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	148268.22295231538	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3192	70	3261	25.0	2	True	NA	NA
PB.5305.5	chr17	+	5489	18	incomplete-splice_match	RNF213	ENST00000508628.6	17730	69	-9	73836	-9	13	3prime_fragment	FALSE	canonical	1	51068	junction_4	160848.46674107594	NA	8	1	TRUE	NA	NA	NA	C	coding	1112	3339	155	3493	15.0	5	True	NA	NA
PB.5305.2	chr17	+	4122	17	full-splice_match	RNF213	ENST00000319921.4	5316	17	-20	1214	-16	-1214	multi-exon	FALSE	canonical	1	80532	junction_1	137606.1107918177	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3192	162	3353	10.0	-2	True	NA	NA
PB.5305.3	chr17	+	5259	17	novel_not_in_catalog	RNF213	novel	17730	69	NA	NA	-14	13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	148268.22295231538	NA	4	NA	TRUE	NA	NA	NA	C	coding	1063	3192	72	3263	15.0	0	True	NA	NA
PB.5305.1	chr17	+	5361	17	full-splice_match	RNF213	ENST00000319921.4	5316	17	-36	-9	-32	9	multi-exon	FALSE	canonical	1	80532	junction_1	137606.1107918177	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3192	178	3369	20.0	-18	True	NA	NA
PB.6027.14	chr19	-	1612	12	incomplete-splice_match	POU2F2	ENST00000529952.5	1716	13	-5	1667	0	-15	3prime_fragment	FALSE	canonical	1	55537	junction_5	39155.84091995421	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	68	1327	75.0	-2	True	ATTAAA	-16
PB.6027.15	chr19	-	1564	12	incomplete-splice_match	POU2F2	ENST00000529067.5	2657	14	-13	3277	0	-15	3prime_fragment	FALSE	canonical	1	61835	junction_5	37993.89313869679	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	68	1279	75.0	-2	True	ATTAAA	-16
PB.6027.12	chr19	-	1925	15	full-splice_match	POU2F2	ENST00000342301.8	3730	15	30	1775	10	21	multi-exon	FALSE	canonical	1	12587	junction_2	55624.30227968743	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	36	1796	75.0	-1	True	NA	NA
PB.6027.13	chr19	-	1856	14	full-splice_match	POU2F2	ENST00000389341.9	6901	14	27	5018	5	21	multi-exon	FALSE	canonical	1	41398	junction_1	48487.64774344397	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	41	1432	75.0	-6	True	NA	NA
PB.6027.10	chr19	-	1980	15	novel_not_in_catalog	POU2F2	novel	6901	14	NA	NA	-31	21	any annotated donor/acceptor	FALSE	canonical	1	669	junction_14	62652.46483171907	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	99	1556	75.0	-33	False	NA	NA
PB.6027.11	chr19	-	1932	14	full-splice_match	POU2F2	ENST00000526816.6	3218	14	-52	1338	-1	21	multi-exon	FALSE	canonical	1	41398	junction_1	49122.99513014463	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	69	1508	75.0	-3	True	NA	NA
PB.3201.11	chr13	-	2522	5	full-splice_match	FBXL3	ENST00000355619.9	3503	5	-16	997	-16	-997	multi-exon	FALSE	canonical	1	170246	junction_4	94578.17642927727	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	342	1628	25.0	-8	True	AATAAA	-19
PB.3201.10	chr13	-	2900	5	full-splice_match	FBXL3	ENST00000355619.9	3503	5	-44	647	1	-647	multi-exon	FALSE	canonical	1	170246	junction_4	94578.17642927727	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	370	1656	45.0	1	True	AATAAA	-25
PB.3201.12	chr13	-	3070	1	novel_in_catalog	FBXL3	novel	3503	5	NA	NA	-880	-1044	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	7571	False	NA	NA
PB.8003.1	chr3	+	2386	15	full-splice_match	FBXL2	ENST00000484457.5	3847	15	-5	1466	-5	1	multi-exon	FALSE	canonical	1	43066	junction_2	26326.5143604779	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	97	1368	55.0	-28	False	AATAAA	-17
PB.8003.2	chr3	+	2475	16	novel_in_catalog	FBXL2	novel	558	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	6004	junction_3	36820.88121608293	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	1056	1457	55.0	-23	False	AATAAA	-17
PB.8003.3	chr3	+	2570	17	novel_not_in_catalog	FBXL2	novel	558	8	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	98	junction_4	41563.65263890434	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	90	1553	60.0	-21	False	AATAAA	-16
PB.3876.1	chr15	+	2173	2	full-splice_match	CERNA1	ENST00000560518.1	1972	2	-196	-5	-72	5	multi-exon	FALSE	canonical	1	8988	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	166	501	969	1469	25.0	516	False	AATAAA	-25
PB.9641.2	chr5	+	7867	24	novel_in_catalog	NSD1	novel	470	2	NA	NA	-47	-6	combination_of_known_junctions	FALSE	canonical	1	102807	junction_1	45238.17335610882	NA	1	NA	TRUE	NA	NA	NA	C	coding	2427	7284	287	7570	40.0	-38	True	AATAAA	-14
PB.9641.1	chr5	+	2582	1	novel_in_catalog	NSD1	novel	533	5	NA	NA	-50	-16	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	328	987	1357	2343	85.0	-41	True	NA	NA
PB.3776.8	chr15	+	3274	12	novel_in_catalog	IVD	novel	668	5	NA	NA	6	-11	combination_of_known_junctions	FALSE	canonical	1	7979	junction_11	149244.85873122222	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	28	1188	75.0	6	True	AATAAA	-16
PB.9641.5	chr5	+	12298	24	novel_in_catalog	NSD1	novel	470	2	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	1	102807	junction_1	45238.17335610882	NA	6	NA	TRUE	NA	NA	NA	C	coding	2427	7284	262	7545	10.0	-13	True	AGTAAA	-17
PB.9641.4	chr5	+	5482	16	novel_not_in_catalog	NSD1	novel	470	2	NA	NA	-31	-7534	any annotated donor/acceptor	FALSE	canonical	1	1055	junction_15	61643.23887171695	NA	0	NA	TRUE	NA	NA	NA	C	coding	1464	4395	271	4665	20.0	-22	True	NA	NA
PB.10449.56	chr7	-	2981	1	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-2054	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.3776.9	chr15	+	4379	12	novel_not_in_catalog	IVD	novel	668	5	NA	NA	8	-20	any annotated donor/acceptor	FALSE	canonical	1	7877	junction_7	149618.9430649886	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	26	856	80.0	8	True	AATAAA	-7
PB.10449.52	chr7	-	1733	11	full-splice_match	HNRNPA2B1	ENST00000356674.7	1711	11	-31	9	7	-4	multi-exon	FALSE	canonical	1	6843184	junction_10	2936723.3636205094	NA	4	NA	TRUE	NA	NA	NA	C	coding	341	1026	201	1226	45.0	-3	True	AATAAA	-8
PB.10449.53	chr7	-	1886	10	incomplete-splice_match	HNRNPA2B1	ENST00000608362.2	3497	11	533	18790	16	2	3prime_fragment	FALSE	canonical	1	6843184	junction_9	3088624.0211955947	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	192	1217	40.0	852	False	AATAAA	-14
PB.10449.51	chr7	-	1807	12	full-splice_match	HNRNPA2B1	ENST00000354667.8	3664	12	-63	1920	-16	2	multi-exon	FALSE	canonical	1	1623379	junction_11	4811703.93536489	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	233	1294	40.0	811	False	AATAAA	-14
PB.8224.12	chr3	+	1723	9	novel_not_in_catalog	MITF	novel	4814	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1923	junction_8	44490.11464850928	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	132	998	90.0	0	True	NA	NA
PB.11791.13	chr9	-	2660	9	novel_not_in_catalog	MAPKAP1	novel	3252	11	NA	NA	21	-9	any annotated donor/acceptor	FALSE	canonical	1	3637	junction_8	309233.7166326426	NA	3	1	TRUE	NA	NA	NA	C	coding	325	978	199	1176	40.0	4	True	AATAAA	-9
PB.10514.3	chr7	-	2308	13	novel_not_in_catalog	POLR2J4	novel	6466	16	NA	NA	-7	5445	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	54224.40036263656	NA	2	1	TRUE	NA	NA	NA	C	coding	223	672	1116	1787	5.0	-34	True	NA	NA
PB.7553.1	chr21	-	2225	1	novel_in_catalog	TSPEAR	novel	3959	12	NA	NA	56440	-6645	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	65	198	104	301	15.0	NA	False	NA	NA
PB.2812.4	chr12	-	4718	21	full-splice_match	FGD6	ENST00000343958.8	9288	21	11	4559	11	90	multi-exon	FALSE	canonical	1	47432	junction_2	10155.472254405504	NA	0	NA	TRUE	NA	NA	NA	C	coding	1430	4293	214	4506	30.0	-45	True	ATTAAA	-17
PB.2812.5	chr12	-	4153	18	incomplete-splice_match	FGD6	ENST00000546711.5	4568	19	16	4059	16	2105	3prime_fragment	FALSE	canonical	1	60237	junction_13	8855.814621813002	NA	1	NA	TRUE	NA	NA	NA	C	coding	1315	3945	209	4153	60.0	-40	True	NA	NA
PB.2812.1	chr12	-	3608	20	full-splice_match	FGD6	ENST00000451107.3	2232	20	53	-1429	35	1201	multi-exon	FALSE	canonical	1	5142	junction_19	18093.631970799473	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	366	2057	100.0	-21	True	NA	NA
PB.2812.2	chr12	-	6048	21	full-splice_match	FGD6	ENST00000343958.8	9288	21	20	3220	20	1201	multi-exon	FALSE	canonical	1	47432	junction_2	10155.472254405504	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	205	4497	100.0	-36	True	NA	NA
PB.2812.3	chr12	-	5556	21	full-splice_match	FGD6	ENST00000343958.8	9288	21	2	3730	2	691	multi-exon	FALSE	canonical	1	47432	junction_2	10155.472254405504	NA	0	NA	TRUE	NA	NA	NA	C	coding	1430	4293	223	4515	80.0	53	False	NA	NA
PB.611.6	chr1	-	4812	11	novel_in_catalog	DENND2D	novel	950	4	NA	NA	-35	-3	intron_retention	FALSE	canonical	1	66144	junction_10	110925.71601589957	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	92	1060	10.0	93	False	AGTAAA	-17
PB.8224.11	chr3	+	1952	9	full-splice_match	MITF	ENST00000394351.8	4479	9	0	2527	0	141	multi-exon	FALSE	canonical	1	34134	junction_5	36537.3888484026	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	132	1391	70.0	0	True	AAGAAA	-13
PB.1837.2	chr11	-	2957	3	full-splice_match	RPS13	ENST00000534329.1	568	3	43	-2432	-4	0	multi-exon	FALSE	canonical	1	3246961	junction_1	2653706.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-6	True	AATAAA	-15
PB.1837.3	chr11	-	2724	4	novel_in_catalog	RPS13	novel	594	2	NA	NA	10	-1	intron_retention	FALSE	canonical	1	3246961	junction_2	2539487.337631095	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-30	False	AATAAA	-14
PB.11791.12	chr9	-	3174	12	novel_not_in_catalog	MAPKAP1	novel	3252	11	NA	NA	5	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	272775.0681148441	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	122	1690	40.0	14	True	AATAAA	-9
PB.6825.1	chr2	+	1723	11	novel_in_catalog	SSB	novel	2463	6	NA	NA	-8	-5	intron_retention	FALSE	canonical	1	459433	junction_8	550957.5474721804	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	605	1420	35.0	-8	True	AATAAA	-23
PB.8887.8	chr4	+	2472	15	full-splice_match	RAP1GDS1	ENST00000408927.7	3681	15	12	1197	4	-2	multi-exon	FALSE	canonical	1	4238	junction_1	109590.07831992987	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	102	1925	10.0	14	True	AATAAA	-22
PB.8887.9	chr4	+	3649	15	full-splice_match	RAP1GDS1	ENST00000339360.9	2092	15	-32	-1525	0	-2	multi-exon	FALSE	canonical	1	7877	junction_1	108789.5707103716	NA	2	NA	TRUE	NA	NA	NA	C	coding	608	1827	81	1907	20.0	35	False	AATAAA	-17
PB.402.36	chr1	+	3464	21	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	2	748	combination_of_known_junctions	FALSE	canonical	1	47348	junction_1	248729.2536543048	NA	3	NA	TRUE	NA	NA	NA	C	coding	639	1920	117	2036	25.0	2	True	CATAAA	-42
PB.402.37	chr1	+	2894	22	novel_not_in_catalog	OSBPL9	novel	3352	26	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	2046	junction_6	279711.19581140275	NA	11	2	TRUE	NA	NA	NA	C	coding	521	1566	655	2220	35.0	4	True	CATAAA	-23
PB.402.30	chr1	+	2842	21	full-splice_match	OSBPL9	ENST00000531828.5	2210	21	43	-675	-6	0	multi-exon	FALSE	canonical	1	130786	junction_1	241312.38016613966	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	452	2167	35.0	-6	True	CATAAA	-24
PB.402.31	chr1	+	2349	21	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	-6	128	combination_of_known_junctions	FALSE	canonical	1	47348	junction_1	248729.2536543048	NA	1	1	TRUE	NA	NA	NA	C	coding	639	1920	125	2044	10.0	-6	True	TATAAA	-17
PB.402.32	chr1	+	2802	20	full-splice_match	OSBPL9	ENST00000462759.5	2755	20	-52	5	-5	0	multi-exon	FALSE	canonical	1	130786	junction_1	249713.53698754704	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	451	2127	35.0	-5	True	CATAAA	-24
PB.402.33	chr1	+	2290	21	full-splice_match	OSBPL9	ENST00000531828.5	2210	21	45	-125	-4	-52	multi-exon	FALSE	canonical	1	130786	junction_1	241312.38016613966	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	450	2165	25.0	-4	True	NA	NA
PB.2283.1	chr11	+	2073	12	full-splice_match	BCO2	ENST00000357685.9	2930	12	40	817	-3	-5	multi-exon	FALSE	canonical	1	14592	junction_1	11381.963617281684	NA	0	NA	TRUE	NA	NA	NA	A	coding	579	1740	96	1835	85.0	-5	True	NA	NA
PB.8887.4	chr4	+	2405	14	full-splice_match	RAP1GDS1	ENST00000408900.7	1942	14	-133	-330	1	-2	multi-exon	FALSE	canonical	1	4238	junction_1	133007.2550346264	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	182	1858	10.0	-29	True	AATAAA	-22
PB.8887.5	chr4	+	1777	7	novel_in_catalog	RAP1GDS1	novel	549	4	NA	NA	4	-10	combination_of_known_junctions	FALSE	canonical	1	1443	junction_6	141784.0800569067	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	179	988	45.0	-26	True	AATAAA	-7
PB.8887.6	chr4	+	1915	6	full-splice_match	RAP1GDS1	ENST00000505378.5	934	6	-40	-941	-2	934	multi-exon	FALSE	canonical	1	4238	junction_1	121500.59275180513	NA	5	1	TRUE	NA	NA	NA	C	coding	215	648	173	820	15.0	-20	True	AATAAA	-14
PB.8887.7	chr4	+	1809	6	full-splice_match	RAP1GDS1	ENST00000505378.5	934	6	-36	-839	2	832	multi-exon	FALSE	canonical	1	4238	junction_1	121500.59275180513	NA	3	1	TRUE	NA	NA	NA	C	coding	215	648	169	816	30.0	-16	True	AATAAA	-18
PB.11974.10	chrX	+	2768	19	incomplete-splice_match	OFD1	ENST00000380550.6	3296	22	-94	2164	43	-2024	3prime_fragment	FALSE	canonical	1	29989	junction_3	67371.1326338003	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2496	272	2767	70.0	-7	True	NA	NA
PB.11974.11	chrX	+	2882	20	novel_not_in_catalog	OFD1	novel	3611	23	NA	NA	-47	-1091	intron_retention	FALSE	canonical	1	15790	junction_19	69215.20539020133	NA	3	NA	TRUE	NA	NA	NA	C	coding	886	2658	225	2882	70.0	40	True	NA	NA
PB.6907.15	chr2	+	4042	1	novel_in_catalog	NAB1	novel	2360	8	NA	NA	23496	-3525	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	3307	False	AATAAA	-36
PB.11791.11	chr9	-	2922	10	novel_in_catalog	MAPKAP1	novel	3252	11	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	1	48274	junction_9	301740.1051951992	NA	3	NA	TRUE	NA	NA	NA	C	coding	289	870	567	1436	30.0	3	True	AATAAA	-11
PB.6907.11	chr2	+	3724	8	novel_in_catalog	NAB1	novel	590	2	NA	NA	68	-249	combination_of_known_junctions	FALSE	canonical	1	34523	junction_5	71652.32526468861	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	80	1540	35.0	1	True	ATTAAA	-36
PB.5858.2	chr19	-	2003	1	genic	NR2C2AP	novel	NA	NA	NA	NA	-4	3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-8	True	TATAAA	-18
PB.10503.1	chr7	-	1601	3	full-splice_match	INHBA	ENST00000242208.4	6064	3	18	4445	18	-25	multi-exon	FALSE	canonical	1	168135	junction_2	58525.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	426	1281	230	1510	75.0	6630	False	AAGAAA	-26
PB.6544.2	chr2	+	4214	22	novel_in_catalog	ZNF638	novel	871	5	NA	NA	-2	-3188	combination_of_known_junctions	FALSE	canonical	1	156330	junction_1	80750.64868317057	NA	0	NA	TRUE	NA	NA	NA	C	coding	1301	3903	311	4213	60.0	-24	True	AAAAAG	-11
PB.6544.3	chr2	+	6509	28	full-splice_match	ZNF638	ENST00000264447.8	6505	28	-5	1	-1	0	multi-exon	FALSE	canonical	1	110631	junction_1	169043.96992396482	NA	1	NA	TRUE	NA	NA	NA	C	coding	1978	5937	320	6256	10.0	-23	True	AATAAA	-27
PB.11328.1	chr8	+	2763	23	full-splice_match	FAM91A1	ENST00000521166.5	2706	23	-57	0	-57	0	multi-exon	FALSE	canonical	1	11858	junction_4	105857.71736109194	NA	5	NA	TRUE	NA	NA	NA	C	coding	789	2370	305	2674	50.0	-40	False	AATAAA	-23
PB.10835.1	chr7	-	3020	2	intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5246	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	83	252	165	416	20.0	0	True	TATAAA	-7
PB.10835.2	chr7	-	2639	1	full-splice_match	AC078846.1	ENST00000608694.1	7083	1	-15	4459	-15	-4459	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	64	195	157	351	45.0	8	True	NA	NA
PB.12228.11	chrX	+	3188	16	full-splice_match	PLS3	ENST00000539310.5	3037	16	-158	7	-103	-7	multi-exon	FALSE	canonical	1	215047	junction_1	349393.37997411075	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	201	2084	30.0	-7364	False	AATAAA	-10
PB.12228.10	chrX	+	2004	16	full-splice_match	PLS3	ENST00000355899.7	3280	16	12	1264	12	-161	multi-exon	FALSE	canonical	1	906112	junction_1	214232.97845040882	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	85	1968	20.0	-2	True	AATAAA	-18
PB.1634.3	chr10	+	5919	36	full-splice_match	PDCD11	ENST00000369797.7	6453	36	-22	556	0	12	multi-exon	TRUE	canonical	1	227860	junction_1	74074.12225995565	NA	3	NA	TRUE	NA	NA	NA	C	coding	1871	5616	117	5732	25.0	-17	True	TTTAAA	-18
PB.1634.2	chr10	+	6579	37	novel_not_in_catalog	PDCD11	novel	6467	36	NA	NA	0	4	any annotated donor/acceptor	FALSE	canonical	1	18854	junction_2	107176.74024673401	NA	0	NA	TRUE	NA	NA	NA	C	coding	1789	5370	463	5832	20.0	-17	True	ATTAAA	-19
PB.1634.1	chr10	+	4500	30	novel_not_in_catalog	PDCD11	novel	6467	36	NA	NA	-2	-5298	any annotated donor/acceptor	TRUE	canonical	1	18854	junction_2	88525.10504931843	NA	0	NA	TRUE	NA	NA	NA	C	coding	1345	4035	465	4499	70.0	-19	True	AAAACA	-20
PB.1634.6	chr10	+	6459	36	full-splice_match	PDCD11	ENST00000369797.7	6453	36	-3	-3	-3	3	multi-exon	FALSE	canonical	1	227860	junction_1	74074.12225995565	NA	0	NA	TRUE	NA	NA	NA	C	coding	1871	5616	98	5713	20.0	2	True	ATTAAA	-18
PB.1634.5	chr10	+	4804	31	incomplete-splice_match	PDCD11	ENST00000369797.7	6453	36	-3	4317	-3	-3749	3prime_fragment	FALSE	canonical	1	227860	junction_1	70636.16785629961	NA	0	NA	TRUE	NA	NA	NA	C	coding	1569	4707	98	4804	15.0	2	True	NA	NA
PB.1634.4	chr10	+	4393	29	incomplete-splice_match	PDCD11	ENST00000369797.7	6453	36	-5	5857	-5	-5289	3prime_fragment	FALSE	canonical	1	227860	junction_1	51188.01225658809	NA	0	NA	TRUE	NA	NA	NA	C	coding	1431	4293	100	4392	70.0	0	True	AAAACA	-29
PB.6818.2	chr2	+	6769	10	full-splice_match	CERS6	ENST00000305747.10	7217	10	444	4	57	-1	multi-exon	FALSE	canonical	1	225118	junction_7	26650.491269647926	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	144	1298	20.0	22	False	AATAAA	-19
PB.8887.1	chr4	+	2434	14	novel_in_catalog	RAP1GDS1	novel	549	4	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	1	4238	junction_1	144293.83275564347	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	190	1887	10.0	-37	True	AATAAA	-22
PB.6818.1	chr2	+	6299	10	full-splice_match	CERS6	ENST00000305747.10	7217	10	423	495	36	-492	multi-exon	FALSE	canonical	1	225118	junction_7	26650.491269647926	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	165	1319	80.0	1	True	NA	NA
PB.6818.4	chr2	+	4053	1	novel_in_catalog	CERS6	novel	7217	10	NA	NA	135781	-179052	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.6544.9	chr2	+	3007	15	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	-2	34549	0	1755	3prime_fragment	FALSE	canonical	1	110631	junction_1	98960.84321993735	NA	2	1	TRUE	NA	NA	NA	C	coding	897	2691	317	3007	30.0	-20	True	AATGAA	-7
PB.11712.25	chr9	+	2138	3	full-splice_match	AKAP2	ENST00000485762.1	363	3	69	-1844	69	341	multi-exon	FALSE	canonical	1	41092	junction_1	158867.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-6	True	AATAAA	-28
PB.11791.17	chr9	-	2059	10	novel_in_catalog	MAPKAP1	novel	3252	11	NA	NA	8	-1	no_combination_of_known_junctions	FALSE	canonical	1	14127	junction_3	280823.1426779249	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	323	1642	25.0	-16	True	AATAAA	-18
PB.5853.4	chr19	-	4279	12	novel_in_catalog	SUGP2	novel	747	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	6275	junction_1	181660.4149161855	NA	1	1	TRUE	NA	NA	NA	C	coding	1082	3249	74	3322	5.0	18	True	AATAAA	-20
PB.9025.1	chr4	+	4433	12	novel_in_catalog	FAM160A1	novel	604	4	NA	NA	-59	1	no_combination_of_known_junctions	FALSE	canonical	1	3503	junction_1	10288.148099746331	NA	1	NA	TRUE	NA	NA	NA	C	coding	1039	3120	435	3554	25.0	-104	False	TATAAA	-20
PB.11712.23	chr9	+	4231	2	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	368127	-4	no_combination_of_known_junctions	FALSE	canonical	1	3334	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-7753	False	ATTAAA	-24
PB.5592.13	chr19	-	1994	12	full-splice_match	LMNB2	ENST00000325327.3	4671	12	16	2661	16	-1356	multi-exon	FALSE	canonical	1	516361	junction_11	131828.9531299511	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	108	1910	30.0	-22	True	NA	NA
PB.8341.1	chr3	-	2042	1	novel_in_catalog	CCDC58	novel	720	5	NA	NA	0	-13366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	-1	True	TATAAA	-38
PB.5853.6	chr19	-	4206	12	novel_in_catalog	SUGP2	novel	747	6	NA	NA	13	-1	intron_retention	FALSE	canonical	1	5927	junction_5	205641.42464674718	NA	1	NA	TRUE	NA	NA	NA	C	coding	1040	3123	93	3215	5.0	-1	True	AATAAA	-20
PB.2517.8	chr12	-	2425	10	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	1	20970	junction_2	263393.11131369055	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	189	1280	75.0	27	True	NA	NA
PB.2517.9	chr12	-	2394	10	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	1	12207	junction_9	258315.36698819703	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	213	1619	75.0	3	True	NA	NA
PB.3352.6	chr14	-	1859	17	novel_not_in_catalog	RABGGTA	novel	735	3	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	11864	junction_3	105396.37642369918	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	108	1784	15.0	55	True	AATAAA	-27
PB.4908.1	chr17	+	7079	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	-47	3559	-47	-3559	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	196	2871	45.0	-3453	False	NA	NA
PB.4908.6	chr17	+	4630	4	incomplete-splice_match	SLFN5	ENST00000299977.8	10591	5	2	6127	2	1168	intron_retention	FALSE	canonical	1	239634	junction_1	16303.423962127981	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	147	2045	80.0	-3404	False	NA	NA
PB.4908.7	chr17	+	3452	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	35	7104	0	191	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	114	2789	15.0	-1	True	TTTAAA	-15
PB.4908.4	chr17	+	4780	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	-22	5833	-22	1462	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	171	2846	70.0	-3428	False	NA	NA
PB.4908.5	chr17	+	2782	1	genic	SLFN5	novel	NA	NA	NA	NA	-11	-14014	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	122	369	123	491	25.0	-3417	False	NA	NA
PB.2517.1	chr12	-	4371	12	full-splice_match	TM7SF3	ENST00000343028.8	2709	12	-42	-1620	-2	1620	multi-exon	FALSE	canonical	1	437409	junction_11	142248.31697381978	NA	5	NA	TRUE	NA	NA	NA	C	coding	570	1713	269	1981	50.0	-53	False	AATAAA	-23
PB.2517.2	chr12	-	3315	12	full-splice_match	TM7SF3	ENST00000343028.8	2709	12	-6	-600	-2	600	multi-exon	FALSE	canonical	1	437409	junction_11	142248.31697381978	NA	3	NA	TRUE	NA	NA	NA	C	coding	570	1713	233	1945	55.0	-17	True	NA	NA
PB.4908.9	chr17	+	1842	4	incomplete-splice_match	SLFN5	ENST00000299977.8	10591	5	4	8913	4	-1618	3prime_fragment	FALSE	canonical	1	239634	junction_1	16303.423962127981	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1698	145	1842	40.0	-3402	False	AATAAA	-22
PB.4417.3	chr16	+	2066	6	full-splice_match	CNEP1R1	ENST00000427478.6	2117	6	43	8	-6	-1	multi-exon	FALSE	canonical	1	49043	junction_5	18949.273406650715	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	68	445	20.0	24	True	AATAAA	-13
PB.2517.5	chr12	-	2667	12	novel_not_in_catalog	TM7SF3	novel	2709	12	NA	NA	-3	5	any annotated donor/acceptor	FALSE	canonical	1	13826	junction_5	246712.74052586974	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	195	1892	75.0	21	True	NA	NA
PB.2517.6	chr12	-	2565	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	45479	junction_3	249307.41787048776	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	231	1790	75.0	-15	True	NA	NA
PB.2517.7	chr12	-	2525	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	26407	junction_10	243687.74265063065	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	404	1750	75.0	23	True	NA	NA
PB.8817.7	chr4	-	4445	25	incomplete-splice_match	ANKRD17	ENST00000358602.8	10784	34	109	29136	109	-49	3prime_fragment	FALSE	canonical	1	168210	junction_24	93564.78301419319	NA	0	NA	TRUE	NA	NA	NA	B	coding	1479	4437	9	4445	80.0	470	False	AAGAAA	-24
PB.8817.6	chr4	-	4609	26	incomplete-splice_match	ANKRD17	ENST00000358602.8	10784	34	208	25018	208	-321	3prime_fragment	FALSE	canonical	1	168210	junction_25	91868.73329113884	NA	0	NA	TRUE	NA	NA	NA	B	coding	1513	4539	69	4607	70.0	569	False	AAGAAA	-25
PB.8817.4	chr4	-	4312	13	incomplete-splice_match	ANKRD17	ENST00000509867.6	8105	34	104281	3	-14753	-3	5prime_fragment	FALSE	canonical	1	356228	junction_10	62772.3928890785	NA	1	NA	TRUE	NA	NA	NA	B	coding	1213	3642	129	3770	25.0	-17	False	ATTAAA	-14
PB.6260.2	chr19	-	2901	2	novel_in_catalog	ZNF814	novel	528	3	NA	NA	6	-112	intron_retention	FALSE	canonical	1	4340	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	773	2322	349	2670	25.0	0	True	ATTAAA	-14
PB.5853.2	chr19	-	6180	11	full-splice_match	SUGP2	ENST00000452918.6	6176	11	-4	0	-4	0	multi-exon	FALSE	canonical	1	218750	junction_10	125232.93275656368	NA	4	NA	TRUE	NA	NA	NA	C	coding	1082	3249	79	3327	5.0	13	True	AATAAA	-21
PB.11957.2	chrX	-	2729	7	full-splice_match	PNPLA4	ENST00000381042.8	3372	7	19	624	19	-108	multi-exon	FALSE	canonical	1	196030	junction_6	40917.082156749915	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	153	914	45.0	-12	True	AATAAA	-43
PB.11957.1	chrX	-	2650	7	novel_in_catalog	PNPLA4	novel	3372	7	NA	NA	15	-102	combination_of_known_junctions	FALSE	canonical	1	35453	junction_6	97981.26594646664	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	68	829	40.0	-1	True	AAGAAA	-17
PB.8257.53	chr3	+	2232	1	full-splice_match	PDLIM1P4	ENST00000504327.1	1006	1	-849	-377	-849	377	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-1772	False	NA	NA
PB.8817.9	chr4	-	4183	25	incomplete-splice_match	ANKRD17	ENST00000509867.6	8105	34	9	26819	9	-42	3prime_fragment	FALSE	canonical	1	38747	junction_24	107436.06604659214	NA	0	NA	TRUE	NA	NA	NA	B	coding	1368	4104	79	4182	75.0	16	True	AAGAAA	-31
PB.8817.8	chr4	-	3822	24	incomplete-splice_match	ANKRD17	ENST00000330838.10	7734	33	-8	26826	-8	-49	3prime_fragment	FALSE	canonical	1	138684	junction_10	95531.61558503726	NA	0	NA	TRUE	NA	NA	NA	B	coding	1228	3684	139	3822	80.0	340	False	AAGAAA	-24
PB.5808.1	chr19	-	3172	3	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	39769	-95875	intron_retention	FALSE	canonical	1	3844	junction_2	53869.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	594	1785	303	2087	95.0	133	False	TATAAA	-6
PB.5808.2	chr19	-	3152	3	full-splice_match	MED26	ENST00000263390.7	3174	3	-1	23	-1	-23	multi-exon	FALSE	canonical	1	52918	junction_2	29332.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	265	2067	95.0	-4	True	TATAAA	-6
PB.5808.3	chr19	-	2986	3	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	39635	-95875	intron_retention	FALSE	canonical	1	727	junction_2	55428.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	573	1722	180	1901	95.0	-1	True	TATAAA	-6
PB.5808.4	chr19	-	2981	3	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	39597	-95875	intron_retention	FALSE	canonical	1	88	junction_2	55747.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	599	1800	97	1896	95.0	-39	False	TATAAA	-6
PB.5808.5	chr19	-	2886	2	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	0	-95875	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	171	516	1286	1801	95.0	-1	True	TATAAA	-6
PB.5808.6	chr19	-	2845	3	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	39643	-95875	intron_retention	FALSE	canonical	1	82	junction_2	55750.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	573	1722	39	1760	95.0	7	True	TATAAA	-6
PB.5808.7	chr19	-	2129	1	full-splice_match	MED26	ENST00000597244.1	3871	1	1707	35	1707	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	171	516	529	1044	95.0	222	False	TATAAA	-6
PB.5808.8	chr19	-	2674	1	novel_in_catalog	MED26	novel	742	3	NA	NA	-23	-47322	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	106	321	287	607	70.0	-6	False	NA	NA
PB.3943.1	chr15	+	6230	9	full-splice_match	SMAD3	ENST00000327367.8	6247	9	-3	20	-3	-20	multi-exon	FALSE	canonical	1	362166	junction_5	73686.3872922774	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	314	1591	20.0	0	True	AATAAA	-21
PB.3943.2	chr15	+	2625	9	full-splice_match	SMAD3	ENST00000327367.8	6247	9	-52	3674	-52	0	multi-exon	FALSE	canonical	1	362166	junction_5	73686.3872922774	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	363	1640	30.0	0	True	ATTAAA	-24
PB.3943.3	chr15	+	2992	9	full-splice_match	SMAD3	ENST00000327367.8	6247	9	-2	3257	-2	417	multi-exon	FALSE	canonical	1	362166	junction_5	73686.3872922774	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	313	1590	65.0	1	True	NA	NA
PB.3943.4	chr15	+	2131	9	novel_not_in_catalog	SMAD3	novel	568	4	NA	NA	8797	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	161297.73549557352	NA	4	1	TRUE	NA	NA	NA	C	coding	320	963	184	1146	30.0	-4801	False	ATTAAA	-24
PB.3943.5	chr15	+	2248	9	novel_not_in_catalog	SMAD3	novel	568	4	NA	NA	-3771	-10	any annotated donor/acceptor	FALSE	canonical	1	867	junction_1	161041.82491082675	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	155	1273	20.0	-3819	False	ATTAAA	-14
PB.10482.5	chr7	-	2862	6	novel_not_in_catalog	HERPUD2	novel	3057	8	NA	NA	101	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	113890.25350503	NA	3	1	TRUE	NA	NA	NA	C	coding	205	618	593	1210	35.0	-1	True	AATAAA	-14
PB.10482.4	chr7	-	2905	6	novel_in_catalog	HERPUD2	novel	3057	8	NA	NA	-44	-4	intron_retention	FALSE	canonical	1	20182	junction_5	124020.92120380336	NA	6	NA	TRUE	NA	NA	NA	C	coding	342	1029	850	1878	35.0	7	False	AATAAA	-14
PB.4136.11	chr16	+	2698	16	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	3	4	intron_retention	FALSE	canonical	1	95282	junction_8	230720.89465620575	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	74	652	15.0	-5	True	NA	NA
PB.2180.1	chr11	+	4243	11	full-splice_match	ACER3	ENST00000532485.5	7378	11	-14	3149	-8	723	multi-exon	FALSE	canonical	1	49155	junction_6	50214.742293075644	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	119	922	10.0	-78	False	NA	NA
PB.2180.2	chr11	+	3453	11	full-splice_match	ACER3	ENST00000532485.5	7378	11	-4	3929	2	-57	multi-exon	FALSE	canonical	1	49155	junction_6	50214.742293075644	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	109	912	100.0	-68	False	NA	NA
PB.2180.3	chr11	+	3368	11	novel_in_catalog	ACER3	novel	834	10	NA	NA	0	-57	combination_of_known_junctions	FALSE	canonical	1	2516	junction_1	62405.32233944473	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	150	827	100.0	0	True	NA	NA
PB.4136.15	chr16	+	2457	18	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	0	-2	intron_retention	FALSE	canonical	1	57618	junction_4	255262.26685122828	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	89	1891	15.0	-20	True	NA	NA
PB.4136.14	chr16	+	2456	19	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-2	7	intron_retention	FALSE	canonical	1	131615	junction_6	235967.88871252048	NA	2	2	TRUE	NA	NA	NA	C	coding	511	1536	395	1930	35.0	-22	True	ATTAAA	-26
PB.4136.17	chr16	+	2534	18	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-1	7	intron_retention	FALSE	canonical	1	586393	junction_8	149706.1326949022	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	70	1092	35.0	-1	True	ATTAAA	-26
PB.12337.9	chrX	-	3260	20	novel_in_catalog	U52112.1	novel	593	5	NA	NA	-17022	-35120	intron_retention	FALSE	canonical	1	7606	junction_8	162368.2023303483	NA	1	NA	TRUE	NA	NA	NA	B	coding	589	1770	44	1813	15.0	-11	True	CATAAA	-19
PB.12337.6	chrX	-	3337	21	novel_in_catalog	U52112.1	novel	593	5	NA	NA	-17037	-35119	intron_retention	FALSE	canonical	1	170728	junction_20	129351.22494173568	NA	0	NA	TRUE	NA	NA	NA	B	coding	975	2928	59	2986	15.0	3	True	CATAAA	-20
PB.12337.7	chrX	-	3261	22	full-splice_match	ARHGAP4	ENST00000350060.9	3235	22	-27	1	-11	-1	multi-exon	FALSE	canonical	1	170728	junction_21	126301.67341596654	NA	0	NA	TRUE	NA	NA	NA	C	coding	946	2841	70	2910	15.0	-8	True	CATAAA	-20
PB.12337.4	chrX	-	3210	22	novel_in_catalog	U52112.1	novel	593	5	NA	NA	-17676	-35118	no_combination_of_known_junctions	FALSE	canonical	1	1861	junction_21	146380.66841280507	NA	1	NA	TRUE	NA	NA	NA	B	coding	923	2772	87	2858	15.0	8359	False	CATAAA	-21
PB.12337.5	chrX	-	3442	20	novel_in_catalog	U52112.1	novel	593	5	NA	NA	-17041	-35119	intron_retention	FALSE	canonical	1	170728	junction_19	131161.75200330385	NA	2	NA	TRUE	NA	NA	NA	B	coding	670	2013	63	2075	15.0	-1	True	CATAAA	-20
PB.12337.2	chrX	-	3410	23	full-splice_match	ARHGAP4	ENST00000370028.7	3372	23	-39	1	6	0	multi-exon	FALSE	canonical	1	17684	junction_18	168677.49742456232	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	98	3058	15.0	-36	True	CATAAA	-21
PB.12337.3	chrX	-	3390	21	novel_in_catalog	U52112.1	novel	593	5	NA	NA	-17075	-35118	intron_retention	FALSE	canonical	1	170728	junction_20	127881.94975425578	NA	0	NA	TRUE	NA	NA	NA	B	coding	641	1926	97	2022	15.0	-35	True	CATAAA	-21
PB.234.3	chr1	-	2779	9	novel_in_catalog	SRSF4	novel	2387	6	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	26529	junction_8	402807.0546815032	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	1001	2116	35.0	9	True	AATAAA	-18
PB.12337.1	chrX	-	3475	20	novel_in_catalog	U52112.1	novel	593	5	NA	NA	-17075	-35118	intron_retention	FALSE	canonical	1	170728	junction_19	129838.77181516665	NA	0	NA	TRUE	NA	NA	NA	B	coding	641	1926	97	2022	15.0	-35	True	CATAAA	-21
PB.4071.1	chr15	-	1721	6	full-splice_match	ARPIN	ENST00000357484.9	7591	6	1	5869	1	0	multi-exon	FALSE	canonical	1	90320	junction_1	60749.47053069681	NA	0	NA	TRUE	NA	NA	NA	A	coding	226	681	121	801	20.0	-4	True	AGTAAA	-13
PB.11284.6	chr8	-	4044	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	517612.5711917382	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	737	1828	15.0	-1	True	GATAAA	-15
PB.9357.2	chr5	+	3334	19	full-splice_match	ERAP2	ENST00000437043.7	5705	19	560	1811	-1	0	multi-exon	FALSE	canonical	1	69924	junction_1	48164.5789465533	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	170	3034	100.0	-1	True	NA	NA
PB.3003.11	chr12	+	2960	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119039.8780339234	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	32	958	20.0	0	True	AATAAA	-17
PB.3003.10	chr12	+	3328	13	full-splice_match	GTF2H3	ENST00000543341.6	3329	13	0	1	0	-1	multi-exon	FALSE	canonical	1	221525	junction_1	80470.3711700341	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	32	958	20.0	0	True	AATAAA	-17
PB.3003.13	chr12	+	2970	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	113	junction_13	119016.98372304914	NA	4	1	TRUE	NA	NA	NA	C	coding	308	927	28	954	25.0	4	True	AATAAA	-15
PB.3003.12	chr12	+	2490	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	0	-468	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119039.8780339234	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	32	958	100.0	0	True	NA	NA
PB.341.1	chr1	-	3212	13	novel_in_catalog	P3H1	novel	2705	15	NA	NA	-28	5	intron_retention	FALSE	canonical	1	349955	junction_12	100191.84857215459	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	81	1307	35.0	-24	False	AATAAA	-25
PB.341.2	chr1	-	2764	14	full-splice_match	P3H1	ENST00000460031.5	2726	14	-39	1	-5	0	multi-exon	FALSE	canonical	1	349955	junction_13	99559.34174577527	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	1504	2442	25.0	-1	True	AATAAA	-19
PB.6467.27	chr2	+	5457	22	incomplete-splice_match	SPTBN1	ENST00000356805.8	8482	36	173680	2	-22553	-1	5prime_fragment	FALSE	canonical	1	1111669	junction_5	353500.3427351435	NA	7	NA	TRUE	NA	NA	NA	C	coding	1449	4350	4	4353	20.0	-1138	False	ATTAAA	-13
PB.6544.33	chr2	+	2883	7	incomplete-splice_match	ZNF638	ENST00000409407.4	4470	9	15575	8	-4032	0	5prime_fragment	FALSE	canonical	1	410126	junction_2	162048.713113955	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	311	2638	30.0	2809	False	AATAAA	-19
PB.1892.1	chr11	+	5477	11	full-splice_match	PDHX	ENST00000227868.8	2389	11	-8	-3080	-8	2929	multi-exon	FALSE	canonical	1	260602	junction_8	73200.54453246915	NA	4	NA	TRUE	NA	NA	NA	C	coding	501	1506	93	1598	45.0	-86	False	ATTAAA	-18
PB.8807.1	chr4	-	4648	17	novel_not_in_catalog	YTHDC1	novel	6232	17	NA	NA	-16	1	any annotated donor/acceptor	FALSE	canonical	1	63438	junction_6	200525.88638914513	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	309	1961	10.0	-5	True	AATAAA	-20
PB.1892.3	chr11	+	2165	10	novel_in_catalog	PDHX	novel	584	5	NA	NA	-12	-1	no_combination_of_known_junctions	FALSE	canonical	1	2136	junction_5	134346.6244933807	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	888	1367	25.0	-30	True	AATAAA	-19
PB.1892.2	chr11	+	4913	10	incomplete-splice_match	PDHX	ENST00000227868.8	2389	11	8	2	8	-2	intron_retention	FALSE	canonical	1	260602	junction_8	73009.37991352909	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	77	1327	30.0	-70	False	AATAAA	-18
PB.1892.5	chr11	+	1765	11	full-splice_match	PDHX	ENST00000227868.8	2389	11	52	572	-8	124	multi-exon	FALSE	canonical	1	260602	junction_8	73200.54453246915	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	33	1538	30.0	-26	True	AATAAA	-42
PB.1892.4	chr11	+	2411	11	novel_in_catalog	PDHX	novel	584	5	NA	NA	-8	748	combination_of_known_junctions	TRUE	canonical	1	10721	junction_10	128814.66732651215	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	33	1328	25.0	-26	True	AATAAA	-21
PB.1892.7	chr11	+	2186	10	novel_not_in_catalog	PDHX	novel	584	5	NA	NA	0	1426	any annotated donor/acceptor	FALSE	canonical	1	2381	junction_9	137781.05034043535	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	25	1380	95.0	-18	True	NA	NA
PB.1892.6	chr11	+	1885	11	full-splice_match	PDHX	ENST00000227868.8	2389	11	54	450	-6	246	multi-exon	FALSE	canonical	1	260602	junction_8	73200.54453246915	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	31	1536	65.0	-24	True	NA	NA
PB.1892.9	chr11	+	5254	11	full-splice_match	PDHX	ENST00000227868.8	2389	11	66	-2931	-3	2780	multi-exon	FALSE	canonical	1	260602	junction_8	73200.54453246915	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	19	1524	10.0	-12	True	TATAAA	-17
PB.1892.8	chr11	+	2483	11	full-splice_match	PDHX	ENST00000227868.8	2389	11	62	-156	2	5	multi-exon	FALSE	canonical	1	260602	junction_8	73200.54453246915	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	23	1528	25.0	-16	True	AATAAA	-18
PB.8751.1	chr4	-	5093	7	full-splice_match	RBM47	ENST00000295971.11	4056	7	33	-1070	33	-1	multi-exon	FALSE	canonical	1	86494	junction_6	63366.93715026438	NA	2	NA	TRUE	NA	NA	NA	C	coding	593	1782	676	2457	20.0	1	True	AATAAA	-29
PB.9249.2	chr5	+	2669	8	full-splice_match	RNF180	ENST00000389100.8	4906	8	-5	2242	-5	-2242	multi-exon	FALSE	canonical	1	19543	junction_1	6958.3114272334315	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	78	1856	40.0	-2	True	AATAAA	-18
PB.487.15	chr1	-	3659	20	novel_not_in_catalog	FUBP1	novel	612	5	NA	NA	26	0	intron_retention	FALSE	canonical	1	2715	junction_3	437887.24898389244	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	57	1784	20.0	3	True	AATAAA	-15
PB.10950.23	chr7	-	3068	18	novel_in_catalog	LMBR1	novel	7997	17	NA	NA	0	240	combination_of_known_junctions	FALSE	canonical	1	19209	junction_12	96253.84885498305	NA	4	1	TRUE	NA	NA	NA	C	coding	312	939	803	1741	30.0	-1	True	AGTAAA	-24
PB.8396.1	chr3	-	6118	19	novel_in_catalog	PIK3R4	novel	5015	20	NA	NA	24	0	intron_retention	TRUE	canonical	1	128251	junction_18	51660.430940098304	NA	4	NA	TRUE	NA	NA	NA	C	coding	1304	3915	535	4449	30.0	17	True	ATTAAA	-27
PB.7056.3	chr2	+	2713	19	novel_not_in_catalog	SP140L	novel	1781	15	NA	NA	2	1	any annotated donor/acceptor	FALSE	canonical	1	658	junction_16	66038.67115832983	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	85	1878	35.0	-7	True	NA	NA
PB.7056.2	chr2	+	2603	18	full-splice_match	SP140L	ENST00000243810.10	2502	18	-96	-5	-10	3	multi-exon	FALSE	canonical	1	658	junction_15	66522.24922181609	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	97	1764	35.0	-19	True	NA	NA
PB.9769.2	chr6	-	3096	11	full-splice_match	DEK	ENST00000397239.7	3427	11	-3	334	-3	15	multi-exon	FALSE	canonical	1	691145	junction_10	442944.1591673718	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	452	1579	65.0	3	True	TATAAA	-8
PB.7056.6	chr2	+	3073	6	novel_not_in_catalog	SP140L	novel	1781	15	NA	NA	-1312	0	any annotated donor/acceptor	FALSE	canonical	1	347	junction_2	60863.16133951637	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	1757	2239	35.0	NA	False	NA	NA
PB.7056.5	chr2	+	2548	18	novel_in_catalog	SP140L	novel	1781	15	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	658	junction_15	67165.70397726241	NA	6	NA	TRUE	NA	NA	NA	C	coding	545	1638	78	1715	30.0	0	True	NA	NA
PB.7056.4	chr2	+	2658	19	full-splice_match	SP140L	ENST00000415673.6	2665	19	9	-2	9	2	multi-exon	FALSE	canonical	1	658	junction_16	62021.70051347619	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	78	1820	30.0	0	True	NA	NA
PB.5551.3	chr19	-	1807	8	novel_not_in_catalog	R3HDM4	novel	1815	8	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	364235.3567146677	NA	2	NA	TRUE	NA	NA	NA	C	coding	240	723	55	777	5.0	7	True	AATAAA	-16
PB.3657.1	chr14	+	1469	13	full-splice_match	VRK1	ENST00000216639.7	1745	13	67	209	-14	-3	multi-exon	FALSE	canonical	1	346668	junction_1	78886.88334478786	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	83	1273	35.0	-16	True	ATTAAA	-20
PB.3657.2	chr14	+	1678	13	full-splice_match	VRK1	ENST00000216639.7	1745	13	67	0	-14	0	multi-exon	FALSE	canonical	1	346668	junction_1	78886.88334478786	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	83	1273	15.0	-16	True	AATAAA	-31
PB.3657.3	chr14	+	1555	12	novel_in_catalog	VRK1	novel	1745	13	NA	NA	-13	-1	no_combination_of_known_junctions	FALSE	canonical	1	18943	junction_8	158839.52545205716	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	82	816	15.0	-15	True	AATAAA	-30
PB.3657.4	chr14	+	2880	13	full-splice_match	VRK1	ENST00000216639.7	1745	13	83	-1218	2	1218	multi-exon	FALSE	canonical	1	346668	junction_1	78886.88334478786	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	67	1257	70.0	0	True	CATAAA	-18
PB.3657.5	chr14	+	4298	3	incomplete-splice_match	VRK1	ENST00000555351.1	667	6	3	11221	3	-11221	3prime_fragment	FALSE	canonical	1	346668	junction_1	53319.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1	True	NA	NA
PB.599.3	chr1	+	1710	9	novel_not_in_catalog	GSTM4	novel	657	9	NA	NA	9274	449	any annotated donor/acceptor	FALSE	canonical	1	13788	junction_5	188734.48264741528	NA	0	NA	TRUE	NA	NA	NA	B	coding	151	456	29	484	5.0	-28	False	AGTAAA	-12
PB.487.10	chr1	-	2637	20	full-splice_match	FUBP1	ENST00000370768.6	2378	20	6	-265	6	265	multi-exon	FALSE	canonical	1	350512	junction_16	287852.49878737016	NA	1	1	TRUE	NA	NA	NA	C	coding	644	1935	77	2011	20.0	-17	True	ATTAAA	-21
PB.7135.3	chr20	-	1777	6	novel_in_catalog	SNRPB	novel	1154	7	NA	NA	-57	-9	intron_retention	FALSE	canonical	1	3219843	junction_2	961509.029390156	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	100	804	30.0	-3	True	AATAAA	-17
PB.7135.2	chr20	-	933	7	full-splice_match	SNRPB	ENST00000438552.6	1008	7	66	9	-55	-9	multi-exon	FALSE	canonical	1	986706	junction_1	1494569.9361853695	NA	2	NA	TRUE	NA	NA	NA	C	coding	240	723	98	820	30.0	-1	True	AATAAA	-17
PB.7135.1	chr20	-	1104	7	full-splice_match	SNRPB	ENST00000381342.6	1154	7	49	1	49	-1	multi-exon	FALSE	canonical	1	2576088	junction_1	1073097.7603364657	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	115	810	20.0	-18	True	AATAAA	-25
PB.7135.5	chr20	-	2170	1	novel_in_catalog	SNRPB	novel	1154	7	NA	NA	3134	-3769	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	3188	False	NA	NA
PB.7135.4	chr20	-	2887	6	novel_in_catalog	SNRPB	novel	1154	7	NA	NA	-56	-10	intron_retention	FALSE	canonical	1	2576088	junction_1	1153192.1080422637	NA	3	NA	TRUE	NA	NA	NA	C	coding	165	498	2105	2602	30.0	-2	True	AATAAA	-16
PB.7648.1	chr22	+	2328	17	incomplete-splice_match	BCR	ENST00000305877.12	7082	23	92871	2082	-10128	5	5prime_fragment	FALSE	canonical	1	333572	junction_12	108572.07532721927	NA	0	NA	TRUE	NA	NA	NA	A	coding	573	1722	174	1895	0.0	NA	False	AATAAA	-19
PB.10297.1	chr6	-	2267	1	antisense	novelGene_ARID1B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-3820	False	AAGAAA	-42
PB.487.12	chr1	-	2367	20	novel_in_catalog	FUBP1	novel	612	5	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	785899	junction_16	232448.80034397208	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	74	2005	20.0	-14	True	AATAAA	-16
PB.9810.3	chr6	-	3093	6	novel_not_in_catalog	ZNF184	novel	3101	6	NA	NA	180	5	any annotated donor/acceptor	FALSE	canonical	1	43066	junction_5	20550.657328659832	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	350	2605	50.0	7046	False	AATAAA	-21
PB.9810.2	chr6	-	3052	6	full-splice_match	ZNF184	ENST00000377419.1	2899	6	-79	-74	-79	-3	multi-exon	TRUE	canonical	1	6928	junction_5	33712.447956207514	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	240	2495	20.0	-1	True	ATTAAA	-19
PB.9810.1	chr6	-	3014	6	full-splice_match	ZNF184	ENST00000211936.10	3101	6	4	83	4	-6	multi-exon	FALSE	canonical	1	20521	junction_5	28615.666818021207	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	282	2537	55.0	-10	True	AATAAA	-10
PB.9810.5	chr6	-	2422	1	novel_in_catalog	ZNF184	novel	3101	6	NA	NA	19419	-21	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	402	1209	752	1960	70.0	NA	False	NA	NA
PB.9810.4	chr6	-	2870	6	novel_not_in_catalog	ZNF184	novel	3101	6	NA	NA	-76	-21	any annotated donor/acceptor	FALSE	canonical	1	1663	junction_1	37246.83241834129	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	426	2408	70.0	2	True	NA	NA
PB.7495.3	chr21	+	3025	10	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	1	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	125498.51989899922	NA	3	1	TRUE	NA	NA	NA	C	coding	515	1548	353	1900	15.0	-48	True	AATACA	-1
PB.267.1	chr1	+	2068	11	novel_in_catalog	AZIN2	novel	778	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	23511	junction_1	17390.439636765943	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1383	339	1721	20.0	-5	True	AATAAA	-26
PB.11539.5	chr9	-	7936	10	novel_not_in_catalog	PAX5	novel	8615	10	NA	NA	8257	-610	any annotated donor/acceptor	FALSE	canonical	1	9368	junction_9	34565.99144309974	NA	1	NA	TRUE	NA	NA	NA	B	coding	283	852	410	1261	90.0	4	True	NA	NA
PB.8269.2	chr3	-	4704	23	full-splice_match	SENP7	ENST00000394094.6	4703	23	-4	3	-4	-3	multi-exon	FALSE	canonical	1	31633	junction_18	43881.21399352409	NA	1	NA	TRUE	NA	NA	NA	C	coding	985	2958	80	3037	30.0	2	True	ATTAAA	-18
PB.8269.1	chr3	-	4899	24	full-splice_match	SENP7	ENST00000394095.6	4945	24	-25	71	-4	-3	multi-exon	FALSE	canonical	1	72965	junction_16	39821.55937725561	NA	1	NA	TRUE	NA	NA	NA	C	coding	1050	3153	80	3232	30.0	2	True	ATTAAA	-18
PB.9554.3	chr5	+	3112	1	novel_in_catalog	PPARGC1B	novel	3004	11	NA	NA	1388	-82936	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-58	False	NA	NA
PB.9476.1	chr5	+	6598	24	full-splice_match	KDM3B	ENST00000314358.9	6813	24	127	88	127	2	multi-exon	FALSE	canonical	1	117672	junction_1	145142.152488654	NA	5	NA	TRUE	NA	NA	NA	A	coding	1761	5286	74	5359	30.0	3	True	AATAAA	-16
PB.196.2	chr1	+	3298	9	full-splice_match	DHDDS	ENST00000236342.11	1403	9	-18	-1877	-2	22	multi-exon	FALSE	canonical	1	137637	junction_1	50779.071735897014	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	112	1113	45.0	-4	True	AATAGA	-37
PB.196.3	chr1	+	3379	9	novel_in_catalog	DHDDS	novel	3338	9	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	1	51577	junction_1	75969.07124438454	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	207	1208	30.0	-3	True	AATAGA	-23
PB.2919.8	chr12	+	2358	5	novel_in_catalog	OAS1	novel	1816	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	25700	junction_2	202059.8312460631	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	73	684	70.0	-5	True	NA	NA
PB.2919.9	chr12	+	4092	4	full-splice_match	OAS1	ENST00000550689.1	950	4	-83	-3059	3	0	multi-exon	FALSE	canonical	1	421190	junction_3	83623.27157356776	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	72	992	70.0	-4	True	NA	NA
PB.196.6	chr1	+	2689	9	novel_not_in_catalog	DHDDS	novel	3338	9	NA	NA	2	-626	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	107355.25475953367	NA	6	1	TRUE	NA	NA	NA	C	coding	334	1005	148	1152	25.0	34	True	CATAAA	-25
PB.196.4	chr1	+	3746	8	novel_in_catalog	DHDDS	novel	3338	9	NA	NA	-1	2	intron_retention	FALSE	canonical	1	65107	junction_7	75939.0429091596	NA	17	1	TRUE	NA	NA	NA	C	coding	334	1005	577	1581	30.0	-1	True	AATAGA	-17
PB.196.5	chr1	+	3270	8	novel_in_catalog	DHDDS	novel	3338	9	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	2563	junction_6	120616.15389054212	NA	5	NA	TRUE	NA	NA	NA	C	coding	117	354	502	855	30.0	4	True	AATAGA	-13
PB.2919.2	chr12	+	1365	5	full-splice_match	OAS1	ENST00000452357.6	1990	5	109	516	-7	-516	multi-exon	FALSE	canonical	1	421190	junction_3	73874.2421162478	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	82	1176	15.0	-14	True	AATAAA	-15
PB.2919.3	chr12	+	3410	1	novel_in_catalog	OAS1	novel	1816	6	NA	NA	-7	1351	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	72	219	82	300	85.0	-14	True	NA	NA
PB.2919.1	chr12	+	1542	6	full-splice_match	OAS1	ENST00000445409.6	1684	6	173	-31	-10	3	multi-exon	FALSE	canonical	1	31545	junction_5	214138.8744311504	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	85	1329	20.0	-17	True	NA	NA
PB.2919.6	chr12	+	3244	1	novel_in_catalog	OAS1	novel	1816	6	NA	NA	-4	1188	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	72	219	79	297	60.0	-11	True	NA	NA
PB.2919.7	chr12	+	1826	6	full-splice_match	OAS1	ENST00000551241.5	2416	6	-40	630	1	450	multi-exon	FALSE	canonical	1	5374	junction_5	224119.73930432813	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	74	1156	85.0	-6	True	NA	NA
PB.2919.4	chr12	+	2094	2	full-splice_match	OAS1	ENST00000553185.1	664	2	-79	-1351	-7	1351	multi-exon	FALSE	canonical	1	552967	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	82	615	85.0	-14	True	NA	NA
PB.2919.5	chr12	+	3735	3	incomplete-splice_match	OAS1	ENST00000550689.1	950	4	-91	2579	-5	-2341	3prime_fragment	FALSE	canonical	1	552967	junction_1	34960.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	80	919	20.0	-12	True	NA	NA
PB.7937.6	chr3	+	4967	19	full-splice_match	ATG7	ENST00000354449.7	4959	19	-15	7	-2	-7	multi-exon	FALSE	canonical	1	112322	junction_1	43218.339780213966	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	41	2152	55.0	4	True	AATAAA	-10
PB.373.3	chr1	-	1689	16	full-splice_match	MUTYH	ENST00000355498.6	1776	16	85	2	-20	-1	multi-exon	FALSE	canonical	1	38679	junction_15	45477.22556357193	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	62	1627	15.0	-22	True	AGTAAA	-18
PB.9612.24	chr5	+	3503	28	novel_not_in_catalog	DOCK2	novel	6097	52	NA	NA	2700	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	119367.2323832728	NA	32	4	TRUE	NA	NA	NA	C	coding	974	2925	17	2941	25.0	NA	False	AATAAA	-19
PB.8275.1	chr3	+	1629	9	incomplete-splice_match	CEP97	ENST00000341893.7	8361	11	667	12412	-1	-1362	3prime_fragment	FALSE	canonical	1	50304	junction_1	13761.734753929099	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	86	1627	65.0	0	True	NA	NA
PB.7060.1	chr2	-	3948	2	novel_not_in_catalog	GPR55	novel	2527	3	NA	NA	-37	0	intron_retention	FALSE	canonical	1	12584	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	305	1264	20.0	2480	False	AATAAA	-23
PB.8275.3	chr3	+	4443	11	full-splice_match	CEP97	ENST00000341893.7	8361	11	693	3225	25	1359	multi-exon	FALSE	canonical	1	50304	junction_1	13858.549745554186	NA	1	NA	TRUE	NA	NA	NA	C	coding	865	2598	60	2657	30.0	-1	True	AATAAA	-19
PB.3637.7	chr14	-	2968	9	novel_not_in_catalog	DDX24	novel	5612	9	NA	NA	4	0	intron_retention	FALSE	canonical	1	287	junction_1	413437.77677494515	NA	9	2	TRUE	NA	NA	NA	C	coding	781	2346	96	2441	20.0	-7	True	ATTAAA	-13
PB.10402.3	chr7	-	1801	3	novel_in_catalog	RPA3	novel	2020	8	NA	NA	105	-198	intron_retention	FALSE	canonical	1	529328	junction_2	73803.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	778	1176	20.0	-10	True	AATAAA	-19
PB.10402.1	chr7	-	2229	4	incomplete-splice_match	RPA3	ENST00000396682.6	847	5	505	-1746	110	1332	5prime_fragment	FALSE	canonical	1	529328	junction_3	75001.06938941308	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	50	415	25.0	-5	True	NA	NA
PB.6426.19	chr2	-	4886	1	novel_in_catalog	HNRNPLL	novel	4173	13	NA	NA	16	-6452	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	7	True	NA	NA
PB.6426.18	chr2	-	1740	6	novel_not_in_catalog	HNRNPLL	novel	4173	13	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	233097.82691187836	NA	3	1	TRUE	NA	NA	NA	C	coding	175	528	416	943	20.0	0	True	AATAAA	-16
PB.11054.9	chr8	+	1941	11	novel_not_in_catalog	ESCO2	novel	698	3	NA	NA	1	-1797	any annotated donor/acceptor	FALSE	canonical	1	4154	junction_4	38736.19550704483	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	70	1860	65.0	1	True	NA	NA
PB.10402.4	chr7	-	2788	2	full-splice_match	RPA3	ENST00000483031.1	641	2	-2089	-58	82	0	multi-exon	FALSE	canonical	1	676935	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	1976	2374	15.0	491	False	ATTAAA	-32
PB.939.7	chr1	+	3663	5	novel_not_in_catalog	PRDX6	novel	1751	5	NA	NA	21	-4	any annotated donor/acceptor	FALSE	canonical	1	5616	junction_1	1675250.1309474653	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	3186	3515	30.0	16	True	ATTAAA	-14
PB.10575.8	chr7	-	1366	3	incomplete-splice_match	AC006001.3	ENST00000639011.1	1819	6	-5	23476	-5	-288	3prime_fragment	FALSE	canonical	1	99535	junction_2	21382.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	-6	True	AATAAA	-10
PB.6426.17	chr2	-	2333	6	incomplete-splice_match	HNRNPLL	ENST00000410076.5	1687	7	23	-413	23	413	intron_retention	FALSE	non_canonical	0	0	junction_2	196265.2476241273	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	281	1123	40.0	14	True	ATTAAA	-14
PB.6426.16	chr2	-	1720	14	full-splice_match	HNRNPLL	ENST00000409636.5	3980	14	116	2144	16	-90	multi-exon	FALSE	non_canonical	0	0	junction_9	167286.99024655647	NA	3	1	TRUE	NA	NA	NA	C	coding	537	1614	47	1660	70.0	7	True	NA	NA
PB.7121.1	chr20	-	2419	8	novel_in_catalog	C20orf96	novel	1420	9	NA	NA	-11	0	intron_retention	FALSE	canonical	1	135834	junction_6	24330.721544112555	NA	0	NA	TRUE	NA	NA	NA	B	coding	297	894	273	1166	5.0	-3	True	AATAAA	-18
PB.7121.2	chr20	-	2262	9	novel_in_catalog	C20orf96	novel	1420	9	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	128890	junction_2	27246.902897393677	NA	5	2	TRUE	NA	NA	NA	B	coding	221	666	401	1066	5.0	8203	False	AATAAA	-17
PB.7121.3	chr20	-	1659	2	incomplete-splice_match	C20orf96	ENST00000360321.6	1575	11	311	17335	-9	-17335	internal_fragment	FALSE	canonical	1	170368	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.6565.6	chr2	-	2782	11	novel_in_catalog	RTKN	novel	2646	13	NA	NA	5	14	intron_retention	FALSE	canonical	1	63795	junction_10	85822.35302903317	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	266	1483	10.0	-26	True	ATTAAA	-36
PB.7839.2	chr22	-	4753	9	novel_in_catalog	POLDIP3	novel	3337	9	NA	NA	8	0	intron_retention	FALSE	canonical	1	21570	junction_5	210843.7087054947	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	47	703	15.0	4995	False	AATAAA	-15
PB.6466.3	chr2	-	6238	47	full-splice_match	PSME4	ENST00000404125.5	7099	47	36	825	-26	-22	multi-exon	TRUE	canonical	1	134226	junction_46	112807.61454794877	NA	1	NA	TRUE	NA	NA	NA	C	coding	1843	5532	21	5552	70.0	-15	True	AAGAAA	-34
PB.7839.3	chr22	-	3392	9	full-splice_match	POLDIP3	ENST00000252115.9	3441	9	48	1	-3	0	multi-exon	FALSE	canonical	1	410805	junction_8	115491.63010230438	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	58	1323	15.0	4984	False	AATAAA	-15
PB.6466.9	chr2	-	3386	29	incomplete-splice_match	PSME4	ENST00000404125.5	7099	47	35	35871	-27	8035	3prime_fragment	FALSE	canonical	1	134226	junction_28	77931.07513526629	NA	0	NA	TRUE	NA	NA	NA	C	coding	1121	3363	22	3384	65.0	-16	True	NA	NA
PB.11345.3	chr8	+	3739	23	full-splice_match	EFR3A	ENST00000254624.9	5438	23	-10	1709	-10	787	multi-exon	FALSE	canonical	1	195311	junction_1	114238.26304478578	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	236	2701	40.0	-15	True	NA	NA
PB.2069.2	chr11	+	2521	15	novel_in_catalog	MUS81	novel	906	6	NA	NA	17	-33	intron_retention	FALSE	canonical	1	206293	junction_1	121883.7135081456	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	333	1700	80.0	-11	True	AATAAA	-32
PB.2069.3	chr11	+	2200	16	full-splice_match	MUS81	ENST00000524647.5	1817	16	-416	33	39	-33	multi-exon	FALSE	canonical	1	47741	junction_12	144041.02216391923	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	311	1585	80.0	11	True	AATAAA	-32
PB.2069.1	chr11	+	2221	16	full-splice_match	MUS81	ENST00000308110.8	2392	16	116	55	-24	-33	multi-exon	FALSE	canonical	1	206293	junction_1	117770.22806850068	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	234	1889	80.0	-27	True	AATAAA	-32
PB.2069.4	chr11	+	2301	15	novel_in_catalog	MUS81	novel	906	6	NA	NA	42	-33	intron_retention	FALSE	canonical	1	14839	junction_8	172780.58210301626	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	308	1282	80.0	14	True	AATAAA	-32
PB.2069.5	chr11	+	2302	14	novel_in_catalog	MUS81	novel	906	6	NA	NA	-137	-33	intron_retention	FALSE	canonical	1	206293	junction_1	126168.19845539244	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	32	1129	80.0	-19	True	AATAAA	-32
PB.7769.2	chr22	+	2081	13	full-splice_match	PICK1	ENST00000356976.7	2055	13	-20	-6	-8	6	multi-exon	FALSE	canonical	1	101992	junction_1	64650.16417934812	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	259	1506	15.0	-17	True	AATAAA	-26
PB.7769.3	chr22	+	2484	11	novel_in_catalog	PICK1	novel	631	4	NA	NA	2	3	intron_retention	FALSE	canonical	1	10911	junction_4	101452.79221115602	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	566	1276	15.0	-7	True	AATAAA	-23
PB.7769.1	chr22	+	1931	13	novel_in_catalog	PICK1	novel	631	4	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	1	51412	junction_1	75046.132334829	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	109	1356	15.0	-18	True	AATAAA	-26
PB.3112.36	chr13	-	3661	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	59174	junction_4	144769.1928040714	NA	4	NA	TRUE	NA	NA	NA	C	coding	534	1605	222	1826	30.0	1	True	AATAAA	-17
PB.3112.37	chr13	-	3552	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	13360	junction_2	153817.19778168568	NA	3	NA	TRUE	NA	NA	NA	C	coding	534	1605	301	1905	30.0	1	True	AATAAA	-17
PB.3112.34	chr13	-	2630	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	1	intron_retention	FALSE	canonical	1	155906	junction_6	116660.84159022654	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	222	2420	25.0	1	True	AATAAA	-18
PB.3112.35	chr13	-	3747	26	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_25	159171.16383868028	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	373	1980	30.0	12	True	AATAAA	-17
PB.3112.32	chr13	-	2682	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	13384	junction_24	131895.3486250176	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	273	2471	20.0	29	True	AATAAA	-19
PB.3112.33	chr13	-	4560	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-12	1	intron_retention	FALSE	canonical	1	181738	junction_23	110013.64860798678	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	198	1799	25.0	25	True	AATAAA	-18
PB.3112.30	chr13	-	2749	26	full-splice_match	SUPT20H	ENST00000350612.10	2739	26	-13	3	-13	0	multi-exon	FALSE	canonical	1	135145	junction_2	128263.45782423925	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2340	235	2574	20.0	-12	True	AATAAA	-20
PB.3112.31	chr13	-	2561	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-4	0	intron_retention	FALSE	canonical	1	59174	junction_3	132200.83428852327	NA	12	3	TRUE	NA	NA	NA	C	coding	720	2163	190	2352	30.0	33	True	AATAAA	-17
PB.943.4	chr1	-	3021	3	full-splice_match	GAS5	ENST00000421068.5	1060	3	-45	-1916	-41	0	multi-exon	FALSE	canonical	1	189239	junction_2	1232450.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-44	False	AATAAA	-13
PB.943.5	chr1	-	2659	4	novel_in_catalog	GAS5	novel	542	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	189239	junction_3	1006605.938559982	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-13
PB.7466.4	chr21	-	4350	1	novel_in_catalog	BTG3	novel	1456	5	NA	NA	27	206	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	266	801	251	1051	75.0	-1	True	AGTAAA	-22
PB.943.7	chr1	-	2162	6	novel_in_catalog	GAS5	novel	542	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	189239	junction_5	1200716.2891663292	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-13
PB.7466.2	chr21	-	4061	5	novel_not_in_catalog	BTG3	novel	1485	6	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	canonical	1	2852	junction_3	212174.16016683087	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	191	421	15.0	20	True	AATAAA	-18
PB.7466.3	chr21	-	1573	6	full-splice_match	BTG3	ENST00000339775.10	1485	6	-90	2	11	-2	multi-exon	FALSE	canonical	1	31972	junction_2	207240.5240574343	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	245	1135	15.0	-17	False	AATAAA	-17
PB.3112.38	chr13	-	3435	23	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	2	0	intron_retention	FALSE	canonical	1	13360	junction_2	153864.2583577934	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	220	1788	30.0	3	True	AATAAA	-17
PB.3112.39	chr13	-	2967	26	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_25	170034.8582285409	NA	3	1	TRUE	NA	NA	NA	C	coding	800	2403	356	2758	30.0	29	True	AATAAA	-17
PB.852.3	chr1	-	4780	33	full-splice_match	COPA	ENST00000241704.7	4789	33	129	-120	2	48	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	0	NA	TRUE	NA	NA	NA	C	coding	1224	3675	102	3776	80.0	-25	True	AATAAA	-14
PB.852.2	chr1	-	4938	33	full-splice_match	COPA	ENST00000241704.7	4789	33	135	-284	-6	212	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	3	NA	TRUE	NA	NA	NA	C	coding	1224	3675	96	3770	90.0	-19	True	NA	NA
PB.852.1	chr1	-	5275	33	full-splice_match	COPA	ENST00000241704.7	4789	33	147	-633	-1	46	multi-exon	TRUE	canonical	1	688780	junction_25	317027.8555173607	NA	1	NA	TRUE	NA	NA	NA	C	coding	1224	3675	84	3758	40.0	-7	True	ATTAAA	-23
PB.2163.2	chr11	+	2803	1	incomplete-splice_match	RNF169	ENST00000299563.4	7823	6	90742	1	3118	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1199	False	AGTAAA	-19
PB.852.7	chr1	-	4665	33	full-splice_match	COPA	ENST00000368069.7	4664	33	-2	1	-2	-1	multi-exon	FALSE	canonical	1	63048	junction_17	380322.4268874934	NA	1	NA	TRUE	NA	NA	NA	C	coding	1233	3702	81	3782	15.0	-4	True	AATAAA	-20
PB.852.6	chr1	-	4685	33	novel_not_in_catalog	COPA	novel	5175	32	NA	NA	-2	9	any annotated donor/acceptor	TRUE	canonical	1	10022	junction_18	385617.9309395108	NA	2	NA	TRUE	NA	NA	NA	C	coding	725	2178	1615	3792	20.0	-29	True	AATAAA	-30
PB.852.4	chr1	-	3395	25	novel_not_in_catalog	COPA	novel	5175	32	NA	NA	-6	12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	310089.835774357	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	96	2621	15.0	-19	True	AATAAA	-33
PB.1967.1	chr11	+	2072	4	full-splice_match	TMEM109	ENST00000227525.7	2413	4	340	1	340	-1	multi-exon	FALSE	canonical	1	780420	junction_3	133253.64600973923	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	64	795	15.0	29	True	AATAAA	-15
PB.1967.2	chr11	+	2062	5	novel_not_in_catalog	TMEM109	novel	2413	4	NA	NA	304	-3	intron_retention	FALSE	canonical	0	0	junction_4	422929.8238262318	NA	3	1	TRUE	NA	NA	NA	C	coding	243	732	100	831	20.0	-7	True	AATAAA	-13
PB.852.8	chr1	-	4663	33	novel_not_in_catalog	COPA	novel	5175	32	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	688	junction_10	386464.36061957973	NA	3	NA	TRUE	NA	NA	NA	C	coding	833	2502	80	2581	15.0	-3	True	AATAAA	-20
PB.7839.8	chr22	-	3467	9	novel_not_in_catalog	POLDIP3	novel	3337	9	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	4328	junction_1	218742.49787103414	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	71	1162	15.0	4	True	AATAAA	-14
PB.9427.1	chr5	-	3207	3	novel_in_catalog	LINC01184	novel	1380	4	NA	NA	-5	-26	combination_of_known_junctions	FALSE	canonical	1	46041	junction_1	22875.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-24	True	AATAAA	-28
PB.9427.2	chr5	-	3035	3	novel_in_catalog	LINC01184	novel	1380	4	NA	NA	4	-189	combination_of_known_junctions	FALSE	canonical	1	46041	junction_1	22875.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-15	True	TATAAA	-13
PB.1492.1	chr10	+	4592	5	incomplete-splice_match	ZMIZ1	ENST00000334512.9	7546	25	236517	9	20099	-9	5prime_fragment	FALSE	canonical	1	217678	junction_3	158261.628932916	NA	0	NA	TRUE	NA	NA	NA	A	coding	269	810	22	831	50.0	-5572	False	AATAAA	-6
PB.8069.1	chr3	-	2225	1	antisense	novelGene_SACM1L_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.549.6	chr1	-	2484	8	novel_not_in_catalog	DNTTIP2	novel	5897	7	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	5047	junction_5	377084.8585566568	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	59	1948	50.0	-1	True	ATTAAA	-10
PB.393.4	chr1	-	4616	17	novel_in_catalog	STIL	novel	5225	18	NA	NA	-2	0	intron_retention	FALSE	canonical	1	17134	junction_1	40066.660968735516	NA	3	1	TRUE	NA	NA	NA	B	coding	915	2748	151	2898	10.0	4	True	AATAAA	-19
PB.6414.8	chr2	-	2187	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	53	-1278	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131693.16078707337	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	256	1911	95.0	-13	True	NA	NA
PB.6414.9	chr2	-	2129	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	69	814	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131693.16078707337	NA	1	1	TRUE	NA	NA	NA	C	coding	551	1656	240	1895	70.0	3	True	NA	NA
PB.393.1	chr1	-	4809	18	novel_in_catalog	STIL	novel	5225	18	NA	NA	8	0	intron_retention	TRUE	canonical	1	29471	junction_12	35782.30562596595	NA	3	NA	TRUE	NA	NA	NA	B	coding	1223	3672	141	3812	10.0	14	True	AATAAA	-22
PB.393.3	chr1	-	4748	16	novel_in_catalog	STIL	novel	5225	18	NA	NA	12	-1	intron_retention	FALSE	canonical	1	17134	junction_1	39744.182957509634	NA	1	NA	TRUE	NA	NA	NA	B	coding	963	2892	137	3028	10.0	18	True	AATAAA	-21
PB.9576.1	chr5	+	5778	11	full-splice_match	SLC36A1	ENST00000243389.7	5781	11	0	3	0	-3	multi-exon	FALSE	canonical	1	67057	junction_1	20560.18133893765	NA	1	NA	TRUE	NA	NA	NA	A	coding	476	1431	224	1654	15.0	-14	True	AATAAA	-22
PB.6414.6	chr2	-	2457	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	67	-1278	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131693.16078707337	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	242	1897	95.0	1	True	NA	NA
PB.6414.7	chr2	-	2366	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	74	-1278	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	134225.69391365454	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	151	1806	95.0	8	True	NA	NA
PB.6414.4	chr2	-	5126	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	88	-9	any annotated donor/acceptor	FALSE	canonical	1	14	junction_1	131690.9583746478	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	221	1876	40.0	22	True	AATAAA	-11
PB.6414.5	chr2	-	1953	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	75	169	any annotated donor/acceptor	FALSE	canonical	1	291	junction_1	131647.391444436	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	234	1889	30.0	9	True	NA	NA
PB.8698.15	chr4	-	1851	12	full-splice_match	WDR1	ENST00000382451.6	2722	12	57	814	-24	-5	multi-exon	FALSE	non_canonical	0	0	junction_6	1190474.210905466	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	227	1627	40.0	-21	True	AATAAA	-12
PB.7188.3	chr20	+	2441	7	novel_in_catalog	PET117	novel	1141	2	NA	NA	-9	19908	no_combination_of_known_junctions	FALSE	canonical	1	53865	junction_5	66478.07153929281	NA	5	NA	TRUE	NA	NA	NA	B	coding	591	1776	642	2417	75.0	-9	True	AGTAAA	-5
PB.12254.6	chrX	+	4425	35	full-splice_match	STAG2	ENST00000218089.13	5218	35	178	615	2	-19	multi-exon	FALSE	canonical	1	26999	junction_1	213049.11885241955	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	333	4139	95.0	-8	True	NA	NA
PB.12254.7	chrX	+	6015	33	novel_in_catalog	STAG2	novel	385	4	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	1	134786	junction_1	171285.3849921846	NA	1	NA	TRUE	NA	NA	NA	C	coding	1231	3696	268	3963	50.0	-8	True	AATAAA	-15
PB.12254.4	chrX	+	4384	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-22	-19	combination_of_known_junctions	FALSE	canonical	1	134786	junction_1	192143.37329145652	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	292	4098	95.0	-6	True	NA	NA
PB.12254.5	chrX	+	4332	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-16	-19	combination_of_known_junctions	FALSE	canonical	1	26999	junction_1	197966.83292667812	NA	1	NA	TRUE	NA	NA	NA	C	coding	1231	3696	351	4046	95.0	0	True	NA	NA
PB.12254.2	chrX	+	5891	33	novel_in_catalog	STAG2	novel	385	4	NA	NA	-25	-158	combination_of_known_junctions	FALSE	canonical	1	134786	junction_1	171285.3849921846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	295	3990	10.0	-9	True	AATAAA	-15
PB.12254.3	chrX	+	4396	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-23	-20	combination_of_known_junctions	FALSE	canonical	1	15615	junction_3	220004.31537190118	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	623	4111	90.0	-7	True	NA	NA
PB.145.7	chr1	-	4022	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	0	6	intron_retention	FALSE	canonical	1	43382	junction_12	372260.06828209345	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	240	1901	35.0	-1	True	AATAAA	-22
PB.12254.1	chrX	+	4225	33	novel_in_catalog	STAG2	novel	385	4	NA	NA	26	-19	combination_of_known_junctions	FALSE	canonical	1	134786	junction_1	171285.3849921846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	244	3939	95.0	-4	True	NA	NA
PB.6565.2	chr2	-	3560	12	full-splice_match	RTKN	ENST00000233330.6	2220	12	116	-1456	68	1409	multi-exon	FALSE	canonical	1	63795	junction_11	84949.89043309615	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	203	1744	30.0	37	True	NA	NA
PB.11625.69	chr9	-	2108	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	220	1611	10.0	-16	True	AATAAA	-13
PB.8509.12	chr3	-	5990	1	novel_in_catalog	GOLIM4	novel	4373	16	NA	NA	38	-48830	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-14	True	NA	NA
PB.12254.8	chrX	+	5934	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	4	-151	combination_of_known_junctions	FALSE	canonical	1	26999	junction_1	197966.83292667812	NA	1	NA	TRUE	NA	NA	NA	C	coding	1231	3696	331	4026	20.0	-6	True	AATAAA	-22
PB.12254.9	chrX	+	5973	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	11	-151	combination_of_known_junctions	FALSE	canonical	1	134786	junction_1	192143.37329145652	NA	3	NA	TRUE	NA	NA	NA	C	coding	1268	3807	259	4065	20.0	1	True	AATAAA	-22
PB.7106.9	chr2	-	3163	6	novel_in_catalog	MTERF4	novel	3993	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	124974	junction_2	53310.00313111977	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	37	1182	25.0	-23	True	GATAAA	-26
PB.6120.1	chr19	-	2092	4	full-splice_match	RPL18	ENST00000551749.5	2091	4	1	-2	-1	1	multi-exon	FALSE	canonical	1	7142197	junction_3	8280851.47270353	NA	2	NA	TRUE	NA	NA	NA	A	coding	102	309	663	971	5.0	-7	True	ATTAAA	-19
PB.6990.13	chr2	-	8051	45	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	3	intron_retention	FALSE	canonical	1	1096730	junction_7	3032148.7489408622	NA	6	1	TRUE	NA	NA	NA	C	coding	2362	7089	267	7355	30.0	-1	True	AATAAA	-21
PB.7188.2	chr20	+	2951	11	novel_in_catalog	PET117	novel	1141	2	NA	NA	-16	44247	no_combination_of_known_junctions	FALSE	canonical	1	53865	junction_5	58982.10307237272	NA	1	NA	TRUE	NA	NA	NA	B	coding	767	2301	649	2949	40.0	-16	True	GATAAA	-18
PB.6795.12	chr2	+	2188	4	incomplete-splice_match	TANC1	ENST00000263635.7	7470	27	-29	133162	-29	-51280	3prime_fragment	FALSE	canonical	1	67871	junction_1	22010.38550826001	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	267	566	90.0	1	True	NA	NA
PB.6795.13	chr2	+	6854	27	full-splice_match	TANC1	ENST00000263635.7	7470	27	-28	644	-28	-640	multi-exon	FALSE	canonical	1	67871	junction_1	28677.15294683374	NA	2	NA	TRUE	NA	NA	NA	C	coding	1861	5586	266	5851	75.0	2	True	AATAGA	-23
PB.6795.10	chr2	+	3905	21	incomplete-splice_match	TANC1	ENST00000263635.7	7470	27	-29	13161	-29	-13157	3prime_fragment	FALSE	canonical	1	67871	junction_1	23753.34568139823	NA	1	NA	TRUE	NA	NA	NA	C	coding	1213	3639	267	3905	30.0	1	True	NA	NA
PB.6795.11	chr2	+	7497	27	full-splice_match	TANC1	ENST00000263635.7	7470	27	-29	2	-29	-2	multi-exon	FALSE	canonical	1	67871	junction_1	28677.15294683374	NA	2	NA	TRUE	NA	NA	NA	C	coding	1861	5586	267	5852	30.0	1	True	AATAAA	-13
PB.7058.1	chr2	+	3695	10	novel_not_in_catalog	CAB39	novel	3826	9	NA	NA	9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	280468.11284905655	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	300	1325	15.0	12	True	AATAAA	-17
PB.6795.14	chr2	+	7497	24	novel_in_catalog	TANC1	novel	7470	27	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	6545	junction_5	37832.627245722695	NA	19	1	TRUE	NA	NA	NA	C	coding	1120	3363	255	3617	30.0	13	True	AATAAA	-13
PB.6795.15	chr2	+	2628	4	novel_not_in_catalog	TANC1	novel	7470	27	NA	NA	31219	-58974	any annotated donor/acceptor	FALSE	canonical	1	59	junction_1	48427.601718670965	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	65	False	AATAAA	-15
PB.9437.2	chr5	+	2456	6	incomplete-splice_match	SLC22A5	ENST00000461013.5	10435	9	10667	5	-1060	-5	5prime_fragment	FALSE	canonical	1	120539	junction_1	19545.023970310194	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	472	1122	45.0	-8476	False	AGTAAA	-11
PB.6544.1	chr2	+	5095	24	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	-45	8456	-9	-1	3prime_fragment	TRUE	canonical	1	110631	junction_1	95001.3521627381	NA	1	NA	TRUE	NA	NA	NA	C	coding	1578	4734	360	5093	70.0	-63	False	AAAAAG	-43
PB.9437.1	chr5	+	3098	10	full-splice_match	SLC22A5	ENST00000245407.7	3237	10	136	3	-12	0	multi-exon	FALSE	canonical	1	78185	junction_3	34333.12484726343	NA	2	NA	TRUE	NA	NA	NA	C	coding	557	1674	86	1759	35.0	-41	False	AGTAAA	-16
PB.11520.8	chr9	-	2947	9	novel_not_in_catalog	FAM214B	novel	2566	10	NA	NA	-12	-29	intron_retention	FALSE	canonical	1	3808	junction_8	72265.44599761615	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	302	1897	75.0	-25	True	AAAACA	-30
PB.8513.10	chr3	-	4092	16	novel_in_catalog	PHC3	novel	913	4	NA	NA	1	-982	combination_of_known_junctions	FALSE	canonical	1	24368	junction_8	73806.86280635124	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	30	3065	75.0	-12	True	NA	NA
PB.549.5	chr1	-	2281	7	full-splice_match	DNTTIP2	ENST00000436063.6	5897	7	23	3593	-19	-78	multi-exon	FALSE	canonical	1	555455	junction_6	116641.66109987842	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	36	2279	55.0	-10	True	AAAAAG	-29
PB.8698.17	chr4	-	2177	15	full-splice_match	WDR1	ENST00000382452.6	3142	15	150	815	61	-6	multi-exon	FALSE	non_canonical	0	0	junction_6	865407.6004475744	NA	4	NA	TRUE	NA	NA	NA	C	coding	606	1821	134	1954	45.0	-1	True	AATAAA	-11
PB.8513.11	chr3	-	3428	16	novel_in_catalog	PHC3	novel	913	4	NA	NA	-9	-1660	combination_of_known_junctions	FALSE	canonical	1	24368	junction_8	73806.86280635124	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	44	3079	15.0	-26	False	TATAAA	-29
PB.8513.12	chr3	-	3207	14	novel_in_catalog	PHC3	novel	913	4	NA	NA	-6	-1671	combination_of_known_junctions	FALSE	canonical	1	15792	junction_10	70522.40279623098	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	41	2869	30.0	-23	False	TATAAA	-18
PB.8128.4	chr3	+	6077	23	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22527	18919	intron_retention	FALSE	canonical	1	485787	junction_1	245272.54716648822	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	3638	5569	5.0	-35	True	AAGAAA	-17
PB.5439.12	chr18	+	2892	6	novel_not_in_catalog	AC011825.3	novel	565	5	NA	NA	73837	19781	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	58826.23986759651	NA	4	NA	TRUE	NA	NA	NA	B	coding	151	456	112	567	35.0	-22	True	ATTAAA	-15
PB.8128.6	chr3	+	5977	23	novel_not_in_catalog	RBM6	novel	2342	21	NA	NA	22527	18919	intron_retention	FALSE	non_canonical	0	0	junction_5	328972.4475477731	NA	2	NA	TRUE	NA	NA	NA	C	coding	568	1707	3763	5469	5.0	-35	True	AAGAAA	-17
PB.8128.7	chr3	+	3058	24	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22527	18918	no_combination_of_known_junctions	FALSE	canonical	1	64793	junction_7	314100.9476427713	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	845	2551	5.0	-35	True	AAGAAA	-16
PB.8128.1	chr3	+	2724	5	full-splice_match	RBM5	ENST00000469838.5	2716	5	-21	13	-10	-13	multi-exon	TRUE	canonical	1	485787	junction_1	149435.572052599	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	186	617	60.0	-4075	False	NA	NA
PB.4522.8	chr16	-	1081	6	full-splice_match	NQO1	ENST00000320623.9	2912	6	389	1442	-2	-61	multi-exon	FALSE	canonical	1	2023514	junction_5	464287.14996967127	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	124	948	15.0	-3	True	AATAAA	-18
PB.5439.13	chr18	+	2937	5	full-splice_match	RNF138	ENST00000257190.9	2071	5	-21	-845	6	-1	multi-exon	FALSE	canonical	1	27321	junction_1	48194.57480619577	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	109	564	35.0	-19	True	ATTAAA	-15
PB.8616.23	chr3	-	5165	20	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	-43	-1	any annotated donor/acceptor	FALSE	canonical	1	2079	junction_6	538915.2520653239	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	121	2508	25.0	-13	False	AATAAA	-15
PB.4522.7	chr16	-	1988	6	full-splice_match	NQO1	ENST00000320623.9	2912	6	391	533	0	-533	multi-exon	FALSE	canonical	1	2023514	junction_5	464287.14996967127	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	122	946	45.0	-1	True	AAGAAA	-39
PB.4522.4	chr16	-	2304	4	full-splice_match	NQO1	ENST00000439109.6	924	4	0	-1380	0	-1	multi-exon	FALSE	canonical	1	22470	junction_1	1371402.0758618612	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	122	730	30.0	-1	True	AATAAA	-25
PB.8616.20	chr3	-	4989	19	full-splice_match	TFRC	ENST00000360110.8	5111	19	79	43	-14	-43	multi-exon	FALSE	canonical	1	1098325	junction_9	275548.7737711156	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	92	2374	15.0	16	True	TATAAA	-20
PB.4522.2	chr16	-	2522	6	full-splice_match	NQO1	ENST00000320623.9	2912	6	389	1	-2	-1	multi-exon	FALSE	canonical	1	2023514	junction_5	464287.14996967127	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	124	948	30.0	-3	True	AATAAA	-25
PB.4522.3	chr16	-	2371	5	full-splice_match	NQO1	ENST00000379046.6	1105	5	24	-1290	0	-36	multi-exon	FALSE	canonical	1	320801	junction_2	1128061.7218336281	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	122	832	65.0	-1	True	NA	NA
PB.8616.25	chr3	-	5080	20	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	5156	junction_14	543224.3224582929	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	783	2423	25.0	-1	True	AATAAA	-15
PB.8616.24	chr3	-	5167	19	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	802	-1	any annotated donor/acceptor	FALSE	canonical	1	157	junction_18	448815.02394777036	NA	19	1	TRUE	NA	NA	NA	C	coding	760	2283	228	2510	25.0	838	False	AATAAA	-15
PB.7777.7	chr22	-	4450	13	full-splice_match	DDX17	ENST00000640332.1	2190	13	232	-2492	-104	-3	multi-exon	FALSE	canonical	1	1050274	junction_1	827883.5128735403	NA	5	NA	TRUE	NA	NA	NA	C	coding	650	1953	6	1958	30.0	1662	False	AATAAA	-13
PB.7777.5	chr22	-	3109	14	novel_not_in_catalog	DDX17	novel	4791	13	NA	NA	1	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1010077.262917847	NA	9	1	TRUE	NA	NA	NA	C	coding	650	1953	312	2264	25.0	-1	True	AATAAA	-14
PB.5439.11	chr18	+	2173	5	full-splice_match	RNF138	ENST00000257190.9	2071	5	-3	-99	-3	99	multi-exon	FALSE	canonical	1	27321	junction_1	48194.57480619577	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	91	546	10.0	-1	True	AAGAAA	-22
PB.7777.3	chr22	-	4761	13	full-splice_match	DDX17	ENST00000396821.7	4791	13	27	3	2	-3	multi-exon	FALSE	canonical	1	587996	junction_1	894875.8433735218	NA	17	1	TRUE	NA	NA	NA	C	coding	652	1959	311	2269	30.0	0	True	AATAAA	-13
PB.8513.16	chr3	-	3093	13	novel_in_catalog	PHC3	novel	913	4	NA	NA	0	-1678	combination_of_known_junctions	FALSE	canonical	1	14484	junction_9	72364.44344312567	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2730	33	2762	50.0	-15	True	TATAAA	-11
PB.7106.5	chr2	-	3168	7	novel_in_catalog	MTERF4	novel	3993	5	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	7125	junction_3	83474.62728162107	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	38	1027	40.0	-24	True	ATTAAA	-30
PB.8513.17	chr3	-	2814	12	novel_in_catalog	PHC3	novel	913	4	NA	NA	-4	-1678	no_combination_of_known_junctions	FALSE	canonical	1	3105	junction_8	85163.7068318356	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	1069	2166	50.0	-8	True	TATAAA	-11
PB.1117.12	chr1	-	4312	8	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-13	-277	no_combination_of_known_junctions	FALSE	canonical	1	23313	junction_3	75794.7723370989	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	385	1368	30.0	-20	True	ATTAAA	-21
PB.5439.17	chr18	+	3038	7	novel_not_in_catalog	AC011825.3	novel	565	5	NA	NA	73861	19781	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	53298.93397203696	NA	5	NA	TRUE	NA	NA	NA	B	coding	173	522	88	609	35.0	2	True	ATTAAA	-15
PB.7456.7	chr21	+	1849	3	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	1	3057	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	12	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-19	True	AATAAA	-37
PB.7456.6	chr21	+	1897	3	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	1	3060	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	16	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-19	True	AATAAA	-40
PB.7456.5	chr21	+	2124	3	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	-1	3285	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	18	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-21	True	AATAAA	-20
PB.7456.4	chr21	+	2218	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	-1	3284	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	14	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-21	True	AATAAA	-19
PB.7456.3	chr21	+	5507	9	novel_in_catalog	BAGE2	novel	1482	3	NA	NA	-1	3680	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	34	NA	TRUE	NA	NA	NA	C	coding	218	657	824	1480	85.0	-21	True	NA	NA
PB.7456.2	chr21	+	1962	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	-8	3061	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	13	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-55	False	AATAAA	-41
PB.7456.1	chr21	+	1506	3	full-splice_match	BAGE2	ENST00000474011.5	1482	3	-23	-1	-23	1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-70	False	ATTAAA	-13
PB.8513.19	chr3	-	3204	15	full-splice_match	PHC3	ENST00000495893.6	12666	15	14	9448	0	-1811	multi-exon	FALSE	canonical	1	110362	junction_14	52892.59553446445	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	19	3006	45.0	-1	True	AATAAA	-8
PB.6793.2	chr2	-	2874	11	full-splice_match	ACVR1	ENST00000434821.5	2861	11	-13	0	-13	0	multi-exon	FALSE	canonical	1	37818	junction_10	71322.16979144704	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	278	1792	35.0	-36	True	AATAAA	-14
PB.7456.9	chr21	+	1943	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	8	3058	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	20	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-12	True	AATAAA	-38
PB.7456.8	chr21	+	2074	5	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	8	3057	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	16	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-12	True	AATAAA	-37
PB.4679.9	chr17	-	3464	25	full-splice_match	ANKFY1	ENST00000341657.8	7418	25	19	3935	-2	-6	multi-exon	FALSE	canonical	1	77655	junction_24	52123.924037389545	NA	0	NA	TRUE	NA	NA	NA	C	coding	1149	3447	18	3464	20.0	-3	True	TATAAA	-11
PB.6772.3	chr2	-	4072	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-38	2496	0	-2496	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	147	1457	35.0	-1	True	AATGAA	-24
PB.6772.2	chr2	-	6070	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-13	473	1	-473	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	122	1432	85.0	0	True	NA	NA
PB.6772.5	chr2	-	3479	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-22	3073	2	2841	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	3	NA	TRUE	NA	NA	NA	C	coding	436	1311	131	1441	70.0	-9	True	TATAAA	-3
PB.6772.4	chr2	-	3687	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-13	2856	1	-2856	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	122	1432	45.0	0	True	AATAAA	-22
PB.6772.7	chr2	-	2914	14	full-splice_match	ORC4	ENST00000264169.6	6598	14	121	3563	82	2353	multi-exon	FALSE	canonical	1	10897	junction_13	121476.75564582998	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	54	1364	30.0	67	False	AATAAA	-20
PB.6772.6	chr2	-	3005	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-36	3561	1	2353	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	145	1455	30.0	1	True	AATAAA	-20
PB.6772.9	chr2	-	2546	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-17	4001	-3	1913	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	126	1436	35.0	-4	True	ATTAAA	-26
PB.6772.8	chr2	-	2569	14	novel_in_catalog	ORC4	novel	6472	13	NA	NA	-2	1912	combination_of_known_junctions	FALSE	canonical	1	40758	junction_13	114965.3846997424	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	150	1460	35.0	-3	True	ATTAAA	-25
PB.4679.3	chr17	-	7428	25	full-splice_match	ANKFY1	ENST00000341657.8	7418	25	0	-10	0	10	multi-exon	FALSE	canonical	1	77655	junction_24	52123.924037389545	NA	2	NA	TRUE	NA	NA	NA	C	coding	1169	3510	37	3546	45.0	-22	True	AATAAA	-27
PB.4679.2	chr17	-	7366	26	novel_not_in_catalog	ANKFY1	novel	7418	25	NA	NA	-1	85	intron_retention	FALSE	canonical	1	7139	junction_1	75260.18713934746	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	38	3550	30.0	-23	True	ATTAAA	-16
PB.4679.5	chr17	-	6705	25	novel_not_in_catalog	ANKFY1	novel	7418	25	NA	NA	-1	4	intron_retention	FALSE	canonical	1	1632	junction_1	69202.21684109709	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	38	3427	50.0	-23	True	AATAAA	-21
PB.4679.7	chr17	-	5187	25	full-splice_match	ANKFY1	ENST00000341657.8	7418	25	-3	2234	-3	133	multi-exon	FALSE	canonical	1	77655	junction_24	52123.924037389545	NA	0	NA	TRUE	NA	NA	NA	C	coding	1169	3510	40	3549	30.0	-25	True	GATAAA	-36
PB.9724.8	chr6	-	1957	5	full-splice_match	BLOC1S5	ENST00000397457.6	2684	5	2	725	2	-314	multi-exon	FALSE	canonical	1	123200	junction_4	20490.837836701554	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	37	600	70.0	-24	True	NA	NA
PB.2215.24	chr11	+	1582	2	incomplete-splice_match	TYR	ENST00000526139.1	1446	3	-18	8726	-18	-8726	3prime_fragment	FALSE	canonical	1	150658	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	80	1186	65.0	0	True	NA	NA
PB.2694.27	chr12	-	2927	11	incomplete-splice_match	STAT6	ENST00000454075.7	3037	22	20	6650	-1	258	3prime_fragment	FALSE	canonical	1	19651	junction_10	284291.9930558017	NA	3	1	TRUE	NA	NA	NA	C	coding	433	1302	267	1568	100.0	-2	True	NA	NA
PB.2694.26	chr12	-	3542	10	novel_in_catalog	STAT6	novel	4034	22	NA	NA	16	258	intron_retention	FALSE	canonical	1	530763	junction_9	194679.17925451061	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	291	980	100.0	407	False	NA	NA
PB.2694.25	chr12	-	3464	22	full-splice_match	STAT6	ENST00000300134.7	4034	22	72	498	-2	-2	multi-exon	FALSE	canonical	1	530763	junction_21	255617.36011087828	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	255	2798	25.0	-9	True	NA	NA
PB.2215.25	chr11	+	4940	5	full-splice_match	TYR	ENST00000263321.5	2485	5	423	-2878	-18	2878	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	80	1669	35.0	0	True	ATTAAA	-28
PB.2694.28	chr12	-	2946	11	incomplete-splice_match	STAT6	ENST00000300134.7	4034	22	40	7608	-19	257	3prime_fragment	FALSE	canonical	1	530763	junction_10	186485.27232132838	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	287	1588	95.0	411	False	NA	NA
PB.8506.8	chr3	-	1932	4	novel_not_in_catalog	BCHE	novel	2454	4	NA	NA	-3	-47294	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	29435.56872221089	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	62	1696	70.0	-4	True	NA	NA
PB.6936.3	chr2	+	2206	7	incomplete-splice_match	SGO2	ENST00000357799.8	4214	9	-1	11329	-1	2311	3prime_fragment	FALSE	canonical	1	66305	junction_1	26291.358050486644	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2106	100	2205	60.0	-51	True	NA	NA
PB.2802.20	chr12	-	1333	11	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	37	62024	-32	-19657	3prime_fragment	FALSE	canonical	1	51278	junction_10	46033.792996449905	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1104	229	1332	55.0	0	True	AATACA	-15
PB.2215.20	chr11	+	2018	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-22	-101	any annotated donor/acceptor	FALSE	canonical	1	656	junction_4	59575.37059355989	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	84	1310	55.0	-4	True	ATTAAA	-14
PB.11299.4	chr8	-	3613	10	novel_not_in_catalog	NUDCD1	novel	4217	10	NA	NA	0	-343	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	120762.93467669786	NA	2	NA	TRUE	NA	NA	NA	C	coding	585	1758	109	1866	40.0	-32	True	AATAAA	-41
PB.2215.21	chr11	+	1976	2	incomplete-splice_match	TYR	ENST00000526139.1	1446	3	-22	8336	-22	-8336	3prime_fragment	FALSE	canonical	1	150658	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	84	1190	75.0	-4	True	CATAAA	-12
PB.6095.2	chr19	-	2049	3	novel_not_in_catalog	PTGIR	novel	2107	3	NA	NA	16	-4	any annotated donor/acceptor	FALSE	canonical	1	4004	junction_1	18852.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	119	892	15.0	-18	True	AATAAA	-21
PB.6095.1	chr19	-	2090	3	full-splice_match	PTGIR	ENST00000291294.6	2107	3	16	1	16	-1	multi-exon	FALSE	canonical	1	21621	junction_1	10044.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	119	1279	15.0	-18	True	AATAAA	-24
PB.11299.5	chr8	-	4211	9	novel_in_catalog	NUDCD1	novel	4217	10	NA	NA	2	-1	intron_retention	FALSE	canonical	1	240282	junction_5	46780.976031762904	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	107	1585	15.0	-30	True	AATAAA	-15
PB.7767.4	chr22	-	2818	4	novel_not_in_catalog	SOX10	novel	1095	4	NA	NA	-8	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	58445.865963489865	NA	2	1	TRUE	NA	NA	NA	B	coding	466	1401	230	1630	10.0	-3	True	AATAAA	-23
PB.2215.22	chr11	+	1841	4	novel_in_catalog	TYR	novel	2485	5	NA	NA	19	-2	no_combination_of_known_junctions	FALSE	canonical	1	2332	junction_3	63796.62358010981	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	43	1254	30.0	-8	True	AATAAA	-14
PB.6095.5	chr19	-	1957	1	full-splice_match	PTGIR	ENST00000595460.1	2026	1	-386	455	-15	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	289	870	909	1778	75.0	9789	False	NA	NA
PB.6095.4	chr19	-	2142	1	full-splice_match	PTGIR	ENST00000595460.1	2026	1	-394	278	-23	130	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	289	870	917	1786	95.0	9781	False	NA	NA
PB.11299.2	chr8	-	3881	11	novel_not_in_catalog	NUDCD1	novel	4217	10	NA	NA	32	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	115036.5164335221	NA	4	NA	TRUE	NA	NA	NA	C	coding	583	1752	77	1828	50.0	0	True	AATAAA	-22
PB.2215.23	chr11	+	1695	3	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-22	16036	any annotated donor/acceptor	FALSE	canonical	1	442	junction_2	75108.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	84	1142	100.0	-4	True	NA	NA
PB.8506.9	chr3	-	3159	2	incomplete-splice_match	BCHE	ENST00000497011.5	2522	5	-3	55130	-3	-49761	3prime_fragment	FALSE	canonical	1	62712	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	38	1681	30.0	-46	False	ACTAAA	-12
PB.6851.16	chr2	-	4105	14	novel_not_in_catalog	ATF2	novel	4176	14	NA	NA	234	0	intron_retention	FALSE	canonical	1	4640	junction_13	123753.11418145997	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	233	1750	20.0	-1	True	AATAAA	-22
PB.7468.1	chr21	-	2104	5	novel_not_in_catalog	LINC01687	novel	897	6	NA	NA	-92228	1276	any annotated donor/acceptor	FALSE	canonical	1	1408	junction_2	1520.6569920596821	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.7468.2	chr21	-	2348	4	novel_not_in_catalog	LINC01687	novel	897	6	NA	NA	-92245	-49557	any annotated donor/acceptor	FALSE	canonical	1	1533	junction_2	1128.0877625433227	NA	0	NA	TRUE	NA	NA	NA	B	coding	102	309	756	1064	70.0	NA	False	NA	NA
PB.7468.3	chr21	-	2593	6	novel_not_in_catalog	LINC01687	novel	897	6	NA	NA	-92258	-49561	any annotated donor/acceptor	FALSE	canonical	1	28	junction_3	1635.0671423522642	NA	0	NA	TRUE	NA	NA	NA	B	coding	102	309	1005	1313	70.0	NA	False	NA	NA
PB.6229.1	chr19	+	1887	5	full-splice_match	ZNF542P	ENST00000495307.5	3393	5	12	1494	-3	-16	multi-exon	FALSE	canonical	1	71417	junction_1	33272.91932920073	NA	1	NA	TRUE	NA	NA	NA	A	coding	241	726	800	1525	65.0	14	True	NA	NA
PB.11274.16	chr8	-	2564	16	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	1973368.5736341253	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	505	2364	85.0	-1	True	NA	NA
PB.4166.4	chr16	-	2545	8	incomplete-splice_match	ZNF598	ENST00000563630.5	3371	12	7466	5	-12	-4	5prime_fragment	TRUE	canonical	1	27780	junction_1	133454.4434219454	NA	1	NA	TRUE	NA	NA	NA	A	coding	268	807	1166	1972	20.0	7463	False	AATAAA	-17
PB.6851.19	chr2	-	4252	15	novel_in_catalog	ATF2	novel	4176	14	NA	NA	0	-5	intron_retention	FALSE	canonical	1	7000	junction_2	144764.56195661216	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	297	1682	15.0	-4	True	AATAAA	-17
PB.9976.2	chr6	+	6051	26	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	-13	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	34773.70532079663	NA	1	NA	TRUE	NA	NA	NA	C	coding	1068	3207	170	3376	20.0	-2258	False	ATTAAA	-19
PB.8664.9	chr4	-	2118	5	full-splice_match	HAUS3	ENST00000243706.8	5620	5	6	3496	1	-4	multi-exon	FALSE	canonical	1	9009	junction_4	77293.80384610398	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	225	2036	45.0	-7	True	AATAAA	-16
PB.8664.8	chr4	-	2430	6	novel_in_catalog	POLN	novel	3253	26	NA	NA	0	-23518	no_combination_of_known_junctions	FALSE	canonical	1	6389	junction_5	75540.27184912693	NA	27	NA	TRUE	NA	NA	NA	B	coding	603	1812	537	2348	45.0	-1	True	AATAAA	-16
PB.11769.1	chr9	-	4983	6	full-splice_match	RBM18	ENST00000417201.3	4974	6	-9	0	-9	0	multi-exon	FALSE	canonical	1	264840	junction_2	32179.948280878267	NA	2	NA	TRUE	NA	NA	NA	C	coding	190	573	151	723	30.0	-28	True	AATAAA	-30
PB.9976.3	chr6	+	4256	1	novel_in_catalog	DAAM2	novel	3871	26	NA	NA	-2	-64542	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-12	True	NA	NA
PB.8664.1	chr4	-	3767	6	novel_not_in_catalog	POLN	novel	2899	24	NA	NA	-20	-19146	intron_retention	FALSE	non_canonical	0	0	junction_1	77550.40784006233	NA	0	NA	TRUE	NA	NA	NA	B	coding	603	1812	770	2581	50.0	-21	False	NA	NA
PB.8664.7	chr4	-	3089	4	incomplete-splice_match	HAUS3	ENST00000443786.2	2430	6	23	4	-8	-4	intron_retention	FALSE	canonical	1	154915	junction_1	21471.35884537042	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	1196	3007	45.0	-21	False	AATAAA	-16
PB.8664.6	chr4	-	2394	6	full-splice_match	HAUS3	ENST00000443786.2	2430	6	33	3	2	-3	multi-exon	FALSE	canonical	1	17673	junction_5	72074.50426773673	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	500	2311	40.0	-11	True	AATAAA	-17
PB.8664.4	chr4	-	3032	6	full-splice_match	HAUS3	ENST00000443786.2	2430	6	39	-641	3	641	multi-exon	FALSE	canonical	1	17673	junction_5	72074.50426773673	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	494	2305	35.0	-5	True	AATAAA	-13
PB.831.11	chr1	-	2830	3	novel_in_catalog	ISG20L2	novel	3178	3	NA	NA	1	155	intron_retention	FALSE	canonical	1	21095	junction_2	80672.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	183	1181	65.0	4	True	NA	NA
PB.831.12	chr1	-	2120	4	full-splice_match	ISG20L2	ENST00000368219.1	2310	4	345	-155	-13	155	multi-exon	FALSE	canonical	1	108041	junction_3	188888.98985794687	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	158	1219	65.0	-10	True	NA	NA
PB.9976.1	chr6	+	6401	26	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	26	0	any annotated donor/acceptor	TRUE	canonical	1	564	junction_1	39115.43370208746	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	364	3570	20.0	-2287	False	ATTAAA	-19
PB.831.15	chr1	-	1938	4	full-splice_match	ISG20L2	ENST00000368219.1	2310	4	354	18	-4	-18	multi-exon	FALSE	canonical	1	108041	junction_3	188888.98985794687	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	149	1210	85.0	-1	True	NA	NA
PB.831.16	chr1	-	1746	4	full-splice_match	ISG20L2	ENST00000368219.1	2310	4	81	483	81	-483	multi-exon	FALSE	canonical	1	108041	junction_3	188888.98985794687	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	422	1483	10.0	-3	True	NA	NA
PB.9976.6	chr6	+	5699	26	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	34773.70532079663	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	157	3363	20.0	-10	True	ATTAAA	-18
PB.11299.9	chr8	-	3349	9	incomplete-splice_match	NUDCD1	ENST00000239690.8	4217	10	264	2624	-3	-868	3prime_fragment	FALSE	canonical	1	240282	junction_5	46780.976031762904	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	112	1590	40.0	-35	True	ATTAAA	-23
PB.7512.2	chr21	+	7790	37	novel_in_catalog	DOP1B	novel	623	4	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	24581	junction_1	37206.56693765585	NA	0	NA	TRUE	NA	NA	NA	B	coding	2298	6897	188	7084	30.0	-43	True	ATTAAA	-27
PB.9976.7	chr6	+	2201	3	full-splice_match	DAAM2	ENST00000475489.5	2186	3	-29	14	1	-14	multi-exon	FALSE	canonical	1	47997	junction_1	38046.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	156	554	100.0	-9	True	NA	NA
PB.9976.4	chr6	+	6218	26	full-splice_match	DAAM2	ENST00000633794.1	3871	26	66	-2413	-2	-2	multi-exon	FALSE	canonical	1	10697	junction_15	38676.66713570858	NA	0	NA	TRUE	NA	NA	NA	C	coding	1077	3234	159	3392	25.0	-12	True	ATTAAA	-14
PB.11348.5	chr8	-	2866	11	novel_not_in_catalog	ST3GAL1	novel	6764	10	NA	NA	-18	-29	any annotated donor/acceptor	FALSE	canonical	1	10	junction_9	78768.49816493901	NA	4	NA	TRUE	NA	NA	NA	C	coding	340	1023	982	2004	95.0	-17	True	NA	NA
PB.6081.5	chr19	-	1915	8	full-splice_match	ERCC1	ENST00000013807.9	1278	8	40	-677	-25	677	multi-exon	FALSE	canonical	1	896886	junction_4	71282.1741889376	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	153	1124	90.0	-1	True	NA	NA
PB.11625.61	chr9	-	2039	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	837804.5437126092	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	210	1598	5.0	-13	True	AATAAA	-14
PB.11240.7	chr8	-	1753	10	incomplete-splice_match	RAD54B	ENST00000336148.9	3068	15	-5	19835	-5	12	3prime_fragment	FALSE	canonical	1	67422	junction_7	11696.815360611918	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1623	131	1753	40.0	0	True	AATAAA	-13
PB.6363.2	chr2	-	3619	20	novel_not_in_catalog	HADHA	novel	3037	20	NA	NA	1	11	intron_retention	FALSE	non_canonical	0	0	junction_16	485180.1896993451	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	1941	3239	10.0	-6	True	AATAAA	-20
PB.6081.1	chr19	-	3387	10	full-splice_match	ERCC1	ENST00000300853.7	3828	10	441	0	14	0	multi-exon	FALSE	canonical	1	305591	junction_9	240925.5912102836	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	152	1045	20.0	-17	True	NA	NA
PB.6791.10	chr2	-	3036	1	novel_in_catalog	CYTIP	novel	2260	8	NA	NA	101	-6241	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-2	True	NA	NA
PB.6081.3	chr19	-	3340	10	full-splice_match	ERCC1	ENST00000589165.5	1453	10	447	-2334	18	0	multi-exon	FALSE	canonical	1	197270	junction_9	270317.19174323825	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	106	999	20.0	-13	True	NA	NA
PB.11325.9	chr8	-	2162	3	incomplete-splice_match	ZHX1	ENST00000395571.7	5108	4	-138	6085	-138	994	3prime_fragment	FALSE	canonical	1	102004	junction_2	29186.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1404	757	2160	70.0	-65	False	NA	NA
PB.6302.1	chr2	-	1674	8	full-splice_match	ITGB1BP1	ENST00000360635.7	4859	8	-1	3186	-1	0	multi-exon	FALSE	canonical	1	65881	junction_7	441683.02437150467	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	899	1501	35.0	225	False	ATTAAA	-21
PB.6302.2	chr2	-	1538	7	novel_in_catalog	ITGB1BP1	novel	4859	8	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	148231	junction_6	366155.9892502177	NA	7	1	TRUE	NA	NA	NA	C	coding	200	603	763	1365	35.0	-4	True	ATTAAA	-21
PB.10217.13	chr6	-	2520	11	novel_not_in_catalog	STX7	novel	15791	10	NA	NA	-29	3786	any annotated donor/acceptor	FALSE	canonical	1	1167	junction_1	190774.80458606163	NA	3	NA	TRUE	NA	NA	NA	C	coding	261	786	147	932	55.0	12	True	AATAAA	-15
PB.10217.12	chr6	-	3838	10	novel_not_in_catalog	STX7	novel	15791	10	NA	NA	1723	3786	any annotated donor/acceptor	FALSE	canonical	1	360	junction_9	199509.62663348377	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	223	1008	55.0	1965	False	AATAAA	-15
PB.10217.10	chr6	-	3660	10	novel_in_catalog	STX7	novel	15791	10	NA	NA	19	3787	combination_of_known_junctions	FALSE	canonical	1	665	junction_9	199421.03207968912	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	2402	2728	55.0	-10	True	AATAAA	-16
PB.10217.17	chr6	-	2878	9	novel_in_catalog	STX7	novel	15791	10	NA	NA	19	2199	intron_retention	FALSE	canonical	1	436700	junction_8	93763.9999852522	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-10	True	AATAAA	-15
PB.10217.15	chr6	-	3005	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-56	12842	17	3005	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	171	956	70.0	-12	True	NA	NA
PB.10217.14	chr6	-	3699	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-53	12145	20	3702	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	168	953	35.0	-9	True	AATACA	-25
PB.11625.66	chr9	-	4383	13	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_3	833937.77034745	NA	5	1	TRUE	NA	NA	NA	B	coding	222	669	3218	3886	10.0	-2	True	AATAAA	-13
PB.10217.19	chr6	-	2330	10	novel_not_in_catalog	STX7	novel	15791	10	NA	NA	291	2197	any annotated donor/acceptor	FALSE	canonical	1	5932	junction_9	197892.1728579593	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	304	1089	15.0	11	True	AATAAA	-13
PB.10217.18	chr6	-	2196	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-53	13648	20	2199	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	168	953	15.0	-9	True	AATAAA	-15
PB.12101.6	chrX	+	4581	5	incomplete-splice_match	APEX2	ENST00000374987.3	3245	6	24	1289	-12	1011	intron_retention	FALSE	canonical	1	263240	junction_2	37237.74447385341	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	3364	4248	20.0	18	True	AATAAA	-16
PB.12101.5	chrX	+	2750	6	full-splice_match	APEX2	ENST00000374987.3	3245	6	9	486	9	-486	multi-exon	FALSE	canonical	1	263240	junction_2	37210.93894327312	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	58	1614	90.0	3	True	NA	NA
PB.12101.4	chrX	+	8209	1	novel_in_catalog	APEX2	novel	3245	6	NA	NA	6	-486	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	294	885	6189	7073	90.0	0	True	NA	NA
PB.12101.3	chrX	+	3265	6	full-splice_match	APEX2	ENST00000374987.3	3245	6	-20	0	-20	0	multi-exon	FALSE	canonical	1	263240	junction_2	37210.93894327312	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	87	1643	5.0	-26	True	AATAAA	-14
PB.12101.2	chrX	+	1807	5	full-splice_match	APEX2	ENST00000471758.1	728	5	-67	-1012	-31	1012	multi-exon	FALSE	canonical	1	21590	junction_2	133149.5696735442	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	430	1473	20.0	-89	False	AATAAA	-17
PB.12101.1	chrX	+	1950	6	full-splice_match	APEX2	ENST00000374987.3	3245	6	14	1281	14	1019	multi-exon	FALSE	canonical	1	263240	junction_2	37210.93894327312	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	53	1609	20.0	8	True	AATAAA	-24
PB.11325.3	chr8	-	3587	4	full-splice_match	ZHX1	ENST00000395571.7	5108	4	-119	1640	-119	34	multi-exon	FALSE	canonical	1	102004	junction_3	45496.713817837684	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	738	3359	50.0	-46	True	ATTAAA	-11
PB.4498.4	chr16	+	5063	28	novel_in_catalog	EDC4	novel	4800	29	NA	NA	27	-1	intron_retention	FALSE	canonical	1	189864	junction_1	109479.23587266218	NA	0	NA	TRUE	NA	NA	NA	C	coding	1020	3063	1647	4709	10.0	10	True	AATAAA	-5
PB.11640.5	chr9	+	3229	17	novel_in_catalog	SECISBP2	novel	3462	17	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	1	53474	junction_2	108883.58658073122	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	371	2407	15.0	-11	True	AATAAA	-19
PB.11640.6	chr9	+	1844	1	novel_in_catalog	SECISBP2	novel	3462	17	NA	NA	6	-10090	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	122	369	934	1302	100.0	1	True	NA	NA
PB.4498.1	chr16	+	4862	28	novel_in_catalog	EDC4	novel	4800	29	NA	NA	6	-3	intron_retention	FALSE	canonical	1	189864	junction_1	110243.3799947492	NA	0	NA	TRUE	NA	NA	NA	C	coding	1437	4314	205	4518	40.0	-11	True	ATTAAA	-10
PB.4498.2	chr16	+	4623	29	full-splice_match	EDC4	ENST00000358933.9	4800	29	176	1	147	-1	multi-exon	FALSE	canonical	1	189864	junction_1	110041.74764784888	NA	0	NA	TRUE	NA	NA	NA	C	coding	1401	4206	64	4269	10.0	-212	False	AATAAA	-5
PB.4498.3	chr16	+	4860	29	novel_not_in_catalog	EDC4	novel	4800	29	NA	NA	18	-1	intron_retention	FALSE	canonical	1	15046	junction_28	129034.19632535538	NA	0	NA	TRUE	NA	NA	NA	C	coding	1437	4314	193	4506	10.0	1	True	AATAAA	-5
PB.1562.15	chr10	-	1536	7	incomplete-splice_match	BLNK	ENST00000224337.9	1784	17	9	24155	9	-8	3prime_fragment	FALSE	canonical	1	182679	junction_6	59544.72332835211	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	134	760	80.0	-14	True	AATACA	-27
PB.1562.17	chr10	-	1998	2	novel_not_in_catalog	BLNK	novel	1784	17	NA	NA	9	-16435	any annotated donor/acceptor	FALSE	canonical	1	2150	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	382	783	30.0	-14	True	AATAAA	-17
PB.1562.16	chr10	-	2078	7	novel_not_in_catalog	BLNK	novel	1784	17	NA	NA	18	-6249	any annotated donor/acceptor	FALSE	canonical	1	1448	junction_1	112825.54588045306	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	172	915	30.0	-2	True	NA	NA
PB.1562.11	chr10	-	2839	16	novel_not_in_catalog	BLNK	novel	1784	17	NA	NA	18	2005	any annotated donor/acceptor	FALSE	canonical	1	948	junction_1	99165.51573059839	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	172	1359	10.0	-2	True	NA	NA
PB.1562.10	chr10	-	2876	15	incomplete-splice_match	BLNK	ENST00000371176.6	1715	16	12	3642	12	-3637	3prime_fragment	FALSE	canonical	1	102871	junction_8	86153.86382528361	NA	1	1	TRUE	NA	NA	NA	C	coding	404	1215	131	1345	30.0	-11	True	NA	NA
PB.1562.13	chr10	-	5230	8	incomplete-splice_match	BLNK	ENST00000413476.6	1599	16	-2	19180	-2	4962	3prime_fragment	FALSE	canonical	1	182679	junction_7	55364.85094279914	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	121	813	100.0	-1	True	NA	NA
PB.1562.12	chr10	-	5273	8	novel_not_in_catalog	BLNK	novel	1784	17	NA	NA	18	4962	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	95902.84679777951	NA	3	1	TRUE	NA	NA	NA	C	coding	135	408	172	579	100.0	-2	True	NA	NA
PB.3906.15	chr15	-	3408	16	full-splice_match	ICE2	ENST00000261520.8	7209	16	20	3781	7	262	multi-exon	FALSE	canonical	1	105991	junction_3	48798.99104949701	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	216	3164	60.0	0	True	AATATA	-2
PB.3906.14	chr15	-	3264	16	full-splice_match	ICE2	ENST00000558181.5	7060	16	19	3777	4	262	multi-exon	FALSE	canonical	1	66281	junction_13	53642.49543470384	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	483	3020	60.0	-16	True	AATATA	-2
PB.3906.17	chr15	-	3003	11	incomplete-splice_match	ICE2	ENST00000261520.8	7209	16	29	27859	-3	23	3prime_fragment	FALSE	canonical	1	110180	junction_9	53226.6385671686	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	207	2525	55.0	9	True	NA	NA
PB.3906.16	chr15	-	3146	16	full-splice_match	ICE2	ENST00000261520.8	7209	16	20	4043	7	0	multi-exon	FALSE	canonical	1	105991	junction_3	48798.99104949701	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2931	216	3146	60.0	0	True	NA	NA
PB.1562.19	chr10	-	6406	1	novel_in_catalog	BLNK	novel	927	11	NA	NA	18	-26276	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-2	True	NA	NA
PB.1562.18	chr10	-	1831	2	novel_not_in_catalog	BLNK	novel	1784	17	NA	NA	-4	-16615	any annotated donor/acceptor	FALSE	canonical	1	2150	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	395	796	75.0	1271	False	NA	NA
PB.3906.12	chr15	-	3771	17	novel_not_in_catalog	ICE2	novel	7209	16	NA	NA	6	525	any annotated donor/acceptor	FALSE	canonical	1	5352	junction_6	68603.41032783556	NA	1	NA	TRUE	NA	NA	NA	C	coding	772	2319	217	2535	40.0	-1	True	AATAAA	-12
PB.3030.3	chr12	-	3666	5	full-splice_match	ZNF605	ENST00000392321.3	6156	5	1	2489	1	-2489	multi-exon	TRUE	canonical	1	7174	junction_1	18958.4804111511	NA	6	1	TRUE	NA	NA	NA	C	coding	672	2019	226	2244	75.0	0	True	NA	NA
PB.3030.2	chr12	-	3604	4	full-splice_match	ZNF605	ENST00000331711.11	838	4	-43	-2723	-28	-2487	multi-exon	FALSE	canonical	1	40152	junction_1	3109.1826364282088	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	255	2180	75.0	-29	False	NA	NA
PB.3030.1	chr12	-	6069	4	full-splice_match	ZNF605	ENST00000331711.11	838	4	-15	-5216	0	6	multi-exon	FALSE	canonical	1	40152	junction_1	3109.1826364282088	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	227	2152	10.0	-1	True	AATAAA	-19
PB.5598.9	chr19	+	2032	13	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	-4	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	294315.9877368554	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	154	1725	65.0	7	True	ATTAAA	-1
PB.2734.1	chr12	+	4753	3	full-splice_match	LINC02454	ENST00000541391.1	612	3	-78	-4063	-69	4063	multi-exon	FALSE	canonical	1	5482	junction_2	4912.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	187	564	219	782	75.0	0	True	NA	NA
PB.5598.2	chr19	+	4839	11	novel_in_catalog	THOP1	novel	4804	13	NA	NA	-20	-15	intron_retention	FALSE	canonical	1	281985	junction_1	126803.9497635622	NA	3	NA	TRUE	NA	NA	NA	C	coding	441	1326	170	1495	65.0	-9	True	ATTAAA	-1
PB.5598.3	chr19	+	4398	12	novel_in_catalog	THOP1	novel	4804	13	NA	NA	-16	-18	intron_retention	FALSE	canonical	1	281985	junction_1	142401.05026832022	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	166	1767	70.0	-5	True	NA	NA
PB.5598.1	chr19	+	2530	14	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	18	-18	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	279834.59118094796	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	490	2226	70.0	-105	False	NA	NA
PB.5598.6	chr19	+	2680	13	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	-8	-18	intron_retention	FALSE	non_canonical	0	0	junction_11	258811.57217090658	NA	3	NA	TRUE	NA	NA	NA	C	coding	557	1674	158	1831	70.0	3	True	NA	NA
PB.5598.7	chr19	+	2570	13	full-splice_match	THOP1	ENST00000307741.10	4804	13	46	2188	-8	20	multi-exon	FALSE	canonical	1	281985	junction_1	136387.07167620296	NA	1	1	TRUE	NA	NA	NA	C	coding	689	2070	158	2227	5.0	3	True	ATTAAA	-37
PB.5598.4	chr19	+	1771	12	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	-16	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	303824.99346558645	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	166	1467	70.0	-5	True	NA	NA
PB.5598.5	chr19	+	2496	13	novel_in_catalog	THOP1	novel	4804	13	NA	NA	-9	-18	combination_of_known_junctions	FALSE	canonical	1	18723	junction_11	208346.10741722467	NA	1	1	TRUE	NA	NA	NA	C	coding	677	2034	159	2192	70.0	2	True	NA	NA
PB.4904.18	chr17	-	2693	1	incomplete-splice_match	RFFL	ENST00000315249.11	7293	7	77508	3129	-3579	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	9857	False	AATAAA	-11
PB.11359.2	chr8	+	1765	5	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	3	0	intron_retention	FALSE	canonical	1	27126	junction_2	191752.22441783434	NA	3	NA	TRUE	NA	NA	NA	C	coding	124	375	915	1289	5.0	3	True	AATAAA	-13
PB.4904.10	chr17	-	4245	6	novel_in_catalog	RFFL	novel	7293	7	NA	NA	-5757	3	combination_of_known_junctions	FALSE	canonical	1	3080	junction_5	102087.74941313968	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	307	1392	10.0	-13	False	AATAAA	-15
PB.4904.12	chr17	-	4066	7	novel_not_in_catalog	RFFL	novel	7293	7	NA	NA	-43	2	any annotated donor/acceptor	FALSE	canonical	1	351	junction_6	80946.05477861303	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	123	1214	5.0	-15	True	AATAAA	-14
PB.4904.13	chr17	-	4036	6	novel_not_in_catalog	RFFL	novel	7293	7	NA	NA	-17	2	any annotated donor/acceptor	FALSE	canonical	1	2073	junction_5	102328.33923288308	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	117	1184	5.0	11	True	AATAAA	-14
PB.9241.3	chr5	-	3769	8	full-splice_match	ELOVL7	ENST00000425382.5	3827	8	57	1	-2	0	multi-exon	FALSE	canonical	1	8781	junction_7	40563.5625302174	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	93	938	20.0	-4	True	AATAAA	-17
PB.4904.15	chr17	-	4542	8	novel_not_in_catalog	RFFL	novel	7293	7	NA	NA	-5757	1	any annotated donor/acceptor	FALSE	canonical	1	1551	junction_7	84255.69730242796	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	600	1691	10.0	-13	False	AATAAA	-13
PB.4904.16	chr17	-	3665	6	novel_in_catalog	RFFL	novel	7293	7	NA	NA	152	1	combination_of_known_junctions	FALSE	canonical	1	36700	junction_5	78703.22005254931	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	134	814	10.0	-31	True	AATAAA	-13
PB.1379.7	chr10	+	3142	19	incomplete-splice_match	BMS1	ENST00000374518.5	7753	23	-17	12823	-17	-12823	3prime_fragment	FALSE	canonical	1	129281	junction_4	102220.95692056582	NA	0	NA	TRUE	NA	NA	NA	C	coding	1020	3060	81	3140	60.0	-11	True	GATAAA	-6
PB.11096.3	chr8	-	3296	18	novel_not_in_catalog	FGFR1	novel	6216	22	NA	NA	1	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	291468.3815092697	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	1782	2942	35.0	0	True	AATAAA	-20
PB.10892.2	chr7	+	4557	7	full-splice_match	GSTK1	ENST00000479303.1	1185	7	3	-3375	3	1636	multi-exon	FALSE	canonical	1	1458219	junction_1	252916.34206025297	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	56	904	20.0	18	True	NA	NA
PB.3904.10	chr15	-	1473	10	full-splice_match	BNIP2	ENST00000607373.5	1851	10	-40	418	0	-27	multi-exon	FALSE	canonical	1	381282	junction_4	133615.53503500766	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	244	1188	25.0	-1	True	TATAAA	-18
PB.10892.3	chr7	+	2744	8	full-splice_match	GSTK1	ENST00000358406.9	1044	8	17	-1717	4	-8	multi-exon	FALSE	canonical	1	1458219	junction_1	253981.04405467358	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	55	735	80.0	19	True	TTTAAA	-17
PB.6571.1	chr2	-	5261	3	novel_not_in_catalog	LBX2	novel	1186	2	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	2104	junction_2	215.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	80	243	86	328	25.0	9904	False	AATAAA	-17
PB.6571.2	chr2	-	2960	1	genic	LBX2	novel	NA	NA	NA	NA	-38	-1120	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	80	243	105	347	70.0	9885	False	NA	NA
PB.9440.7	chr5	+	4339	25	full-splice_match	RAD50	ENST00000378823.7	8306	25	59	3908	59	-40	multi-exon	FALSE	canonical	1	187739	junction_1	86847.21826479725	NA	0	NA	TRUE	NA	NA	NA	C	coding	1312	3939	329	4267	50.0	18	True	AAGAAA	-13
PB.10888.8	chr7	-	1203	3	full-splice_match	BRAF	ENST00000469930.2	1180	3	-20	-3	-20	0	multi-exon	FALSE	canonical	1	60770	junction_1	4154.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	60	578	35.0	-55	True	AATAAA	-18
PB.10888.5	chr7	-	3747	18	novel_in_catalog	BRAF	novel	9578	19	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	1	23431	junction_2	47727.04378211509	NA	16	NA	TRUE	NA	NA	NA	C	coding	758	2277	248	2524	10.0	-30	True	AATAAA	-16
PB.3159.19	chr13	+	2205	4	full-splice_match	RB1	ENST00000531171.5	658	4	1	-1548	1	-3	multi-exon	FALSE	canonical	1	3222	junction_1	260477.0818252965	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-80	False	AATAAA	-18
PB.10888.7	chr7	-	2442	18	full-splice_match	BRAF	ENST00000646891.1	6458	18	194	3822	-2	0	multi-exon	FALSE	canonical	1	23431	junction_2	46662.30627386357	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	32	2332	30.0	-27	True	AATAAA	-26
PB.10888.6	chr7	-	2891	18	full-splice_match	BRAF	ENST00000646891.1	6458	18	217	3350	1	299	multi-exon	FALSE	canonical	1	23431	junction_2	46662.30627386357	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	9	2309	30.0	-4	True	AATAAA	-17
PB.2082.2	chr11	-	3098	6	novel_in_catalog	YIF1A	novel	667	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	922619	junction_5	190649.3938648639	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	2612	3043	10.0	-9	True	NA	NA
PB.2082.1	chr11	-	1098	8	full-splice_match	YIF1A	ENST00000376901.8	1124	8	25	1	0	0	multi-exon	FALSE	canonical	1	920473	junction_3	183175.09851182371	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	161	1042	10.0	-11	True	NA	NA
PB.10888.2	chr7	-	7434	19	novel_not_in_catalog	BRAF	novel	9578	19	NA	NA	436	-1981	any annotated donor/acceptor	FALSE	canonical	1	1076	junction_18	49173.28248800422	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	101	2248	65.0	0	True	NA	NA
PB.9415.5	chr5	-	4923	21	novel_not_in_catalog	CEP120	novel	4900	20	NA	NA	-30	28	any annotated donor/acceptor	TRUE	canonical	1	491	junction_16	57227.64609336557	NA	27	3	TRUE	NA	NA	NA	C	coding	1000	3003	377	3379	35.0	28	True	AATAAA	-13
PB.4247.2	chr16	-	1235	2	full-splice_match	SOCS1	ENST00000332029.2	1225	2	-22	12	-1	0	multi-exon	FALSE	canonical	1	51504	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	174	809	60.0	-2	True	AATAAA	-25
PB.9415.2	chr5	-	4635	21	novel_not_in_catalog	CEP120	novel	4900	20	NA	NA	-34	28	any annotated donor/acceptor	FALSE	canonical	1	1268	junction_20	47308.304641574294	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	131	3091	35.0	24	True	AATAAA	-13
PB.4247.1	chr16	-	1542	2	full-splice_match	SOCS1	ENST00000332029.2	1225	2	-22	-295	-1	295	multi-exon	TRUE	canonical	1	51504	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	211	636	174	809	15.0	-2	True	NA	NA
PB.11359.9	chr8	+	2814	5	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	-3476	-3	intron_retention	FALSE	canonical	1	31868	junction_4	239176.90306862825	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	961	1407	15.0	3	True	AGTAAA	-18
PB.5059.10	chr17	-	4903	16	novel_in_catalog	KANSL1	novel	9095	8	NA	NA	5	-173	combination_of_known_junctions	FALSE	canonical	1	19145	junction_15	86859.33052199338	NA	2	NA	TRUE	NA	NA	NA	C	coding	1102	3309	277	3585	90.0	NA	False	NA	NA
PB.5059.11	chr17	-	4856	15	full-splice_match	KANSL1	ENST00000432791.6	5343	15	245	242	-153	-173	multi-exon	FALSE	canonical	1	97512	junction_14	65601.92363814883	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	230	3538	90.0	-39	True	NA	NA
PB.5059.12	chr17	-	2813	2	full-splice_match	KANSL1	ENST00000639520.1	2655	2	15	-173	0	173	multi-exon	FALSE	canonical	1	19145	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.5348.6	chr17	+	2552	10	novel_in_catalog	NARF	novel	599	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	2798	junction_8	263859.28193646076	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	64	900	20.0	0	True	ATTAAA	-18
PB.5348.5	chr17	+	1572	11	full-splice_match	NARF	ENST00000309794.15	3949	11	102	2275	-3	0	multi-exon	FALSE	canonical	1	472427	junction_1	207384.5239319704	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	97	1467	20.0	-3	True	ATTAAA	-18
PB.5348.4	chr17	+	1722	12	novel_not_in_catalog	NARF	novel	599	4	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	350498.984189259	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	1031	1615	20.0	-13	True	ATTAAA	-20
PB.4784.1	chr17	+	3793	6	full-splice_match	ZNF286A	ENST00000395894.6	5443	6	1	1649	0	-1314	multi-exon	FALSE	canonical	1	29456	junction_1	54525.38946729313	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	716	1945	95.0	NA	False	NA	NA
PB.4784.2	chr17	+	3731	6	full-splice_match	ZNF286A	ENST00000421016.5	5541	6	166	1644	-1	-1314	multi-exon	FALSE	canonical	1	29456	junction_1	58933.761301990555	NA	3	NA	TRUE	NA	NA	NA	C	coding	521	1566	318	1883	95.0	NA	False	NA	NA
PB.4784.3	chr17	+	3641	6	full-splice_match	ZNF286A	ENST00000583566.5	1806	6	13	-1848	1	-1314	multi-exon	FALSE	canonical	1	1066	junction_1	67146.23552515807	NA	4	NA	TRUE	NA	NA	NA	C	coding	521	1566	228	1793	95.0	NA	False	NA	NA
PB.4784.4	chr17	+	3686	6	full-splice_match	ZNF286A	ENST00000585194.5	607	6	14	-3093	6	-1315	multi-exon	FALSE	canonical	1	1066	junction_1	63723.33936447462	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	610	1839	90.0	NA	False	NA	NA
PB.4784.5	chr17	+	3038	6	full-splice_match	ZNF286A	ENST00000395894.6	5443	6	22	2383	8	1114	multi-exon	FALSE	canonical	1	29456	junction_1	54525.38946729313	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	695	1924	40.0	NA	False	AATAAA	-16
PB.4784.6	chr17	+	3975	5	full-splice_match	ZNF286A	ENST00000464847.6	5616	5	-8	1649	-8	-1314	multi-exon	FALSE	canonical	1	45695	junction_4	48480.1555916181	NA	3	NA	TRUE	NA	NA	NA	C	coding	521	1566	562	2127	95.0	NA	False	NA	NA
PB.8840.10	chr4	+	3634	7	novel_not_in_catalog	CCNG2	novel	5526	8	NA	NA	3	1001	intron_retention	FALSE	canonical	1	118	junction_1	206669.47419766395	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	288	932	65.0	3	True	AATAGA	-10
PB.8527.22	chr3	-	2092	16	full-splice_match	TBL1XR1	ENST00000430069.5	7948	16	-21	5877	-15	113	multi-exon	FALSE	canonical	1	27559	junction_15	177123.7590789747	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	282	1826	75.0	5293	False	NA	NA
PB.8527.23	chr3	-	2036	16	full-splice_match	TBL1XR1	ENST00000457928.6	4101	16	172	1893	1	113	multi-exon	FALSE	canonical	1	119813	junction_4	161165.38292402896	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	226	1770	75.0	0	True	NA	NA
PB.8527.20	chr3	-	2905	17	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	0	894	combination_of_known_junctions	FALSE	canonical	1	9473	junction_16	194861.68588072245	NA	5	NA	TRUE	NA	NA	NA	C	coding	514	1545	314	1858	30.0	-1	True	ATTAAA	-13
PB.8527.21	chr3	-	2213	17	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	-18	113	no_combination_of_known_junctions	FALSE	canonical	1	3075	junction_16	193323.5671027009	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	403	1947	75.0	5290	False	NA	NA
PB.11330.1	chr8	-	1736	1	full-splice_match	RNF139-AS1	ENST00000530778.1	1767	1	31	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	18	True	AATAAA	-30
PB.7911.14	chr3	-	2294	3	novel_not_in_catalog	OXTR	novel	4364	4	NA	NA	-56	-1637	any annotated donor/acceptor	FALSE	canonical	1	10	junction_2	64210.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	193	1362	65.0	-3	True	NA	NA
PB.10500.1	chr7	+	1824	1	antisense	novelGene_MPLKIP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-2952	False	NA	NA
PB.9951.5	chr6	+	3093	12	full-splice_match	MAPK14	ENST00000229794.8	3779	12	-5	691	-5	-691	multi-exon	FALSE	canonical	1	309743	junction_9	93457.1833399376	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	394	1476	20.0	5	True	TATAAA	-20
PB.459.9	chr1	+	1912	1	novel_in_catalog	MIER1	novel	3595	14	NA	NA	13	-16073	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-14	True	ATTAAA	-23
PB.3474.7	chr14	+	3019	1	novel_in_catalog	PCNX4	novel	17339	10	NA	NA	4	-16216	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	121	366	2243	2608	30.0	-70	True	NA	NA
PB.3474.6	chr14	+	3049	9	incomplete-splice_match	PCNX4	ENST00000406854.5	4666	11	4	10144	4	397	3prime_fragment	FALSE	canonical	1	85973	junction_2	82358.62909252437	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2499	551	3049	75.0	-70	True	NA	NA
PB.3474.5	chr14	+	3719	11	novel_in_catalog	PCNX4	novel	17339	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	15147	junction_9	100359.23144389858	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	554	2716	40.0	-73	True	AATAAA	-19
PB.3474.4	chr14	+	3453	10	full-splice_match	PCNX4	ENST00000317623.8	17339	10	353	13533	78	-121	multi-exon	FALSE	canonical	1	83263	junction_1	73965.3055166599	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	170	2986	25.0	-46	False	AATATA	-16
PB.3474.3	chr14	+	2980	10	novel_in_catalog	PCNX4	novel	17339	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	15147	junction_8	98590.28568678797	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	517	1977	40.0	-76	True	AATAAA	-19
PB.3474.2	chr14	+	4243	11	novel_not_in_catalog	PCNX4	novel	17339	10	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	5254	junction_4	112016.60208397682	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	557	3655	40.0	-76	True	AATAAA	-19
PB.3474.1	chr14	+	3254	8	novel_in_catalog	PCNX4	novel	17339	10	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	3202	junction_1	109201.35054764008	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	520	2667	40.0	-78	True	AATAAA	-18
PB.9142.2	chr5	-	6156	23	full-splice_match	SEMA5A	ENST00000382496.9	11762	23	0	5606	0	-5606	multi-exon	FALSE	canonical	1	43538	junction_22	11981.715820020752	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	667	3891	45.0	-1	True	TATAAA	-16
PB.3474.9	chr14	+	4131	10	incomplete-splice_match	PCNX4	ENST00000406854.5	4666	11	7	8674	-1	-50	3prime_fragment	FALSE	canonical	1	85973	junction_2	88741.86248236796	NA	0	NA	TRUE	NA	NA	NA	C	coding	1095	3288	548	3835	35.0	-67	True	ATTAAA	-20
PB.3474.8	chr14	+	2992	10	novel_not_in_catalog	PCNX4	novel	17339	10	NA	NA	-3	84	any annotated donor/acceptor	FALSE	canonical	1	1006	junction_3	111328.65660847128	NA	2	1	TRUE	NA	NA	NA	C	coding	762	2289	614	2902	25.0	-69	True	AAAAAG	-31
PB.7955.5	chr3	-	3737	2	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	26	0	any annotated donor/acceptor	FALSE	canonical	1	87512	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	12	True	AATAAA	-14
PB.7955.4	chr3	-	3005	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	13	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159351.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-17
PB.7955.7	chr3	-	3497	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	-24	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43756.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	892	False	AATAAA	-14
PB.7955.6	chr3	-	3513	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	-13	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159351.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	903	False	AATAAA	-14
PB.7955.1	chr3	-	3673	2	full-splice_match	FGD5-AS1	ENST00000424349.1	3792	2	118	1	116	-1	multi-exon	FALSE	canonical	1	318703	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1034	False	AATAAA	-13
PB.7955.3	chr3	-	3322	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	-4	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	43756.0	NA	22	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-20	True	AATAAA	-17
PB.7955.2	chr3	-	4712	1	novel_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	13	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-17
PB.7955.9	chr3	-	2972	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159351.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-6	True	AATAAA	-14
PB.7955.8	chr3	-	3356	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	-14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159351.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	902	False	AATAAA	-14
PB.11456.6	chr9	+	1762	5	full-splice_match	TYRP1	ENST00000381136.2	872	5	-37	-853	-37	-202	multi-exon	FALSE	canonical	1	8554	junction_1	202231.99954816746	NA	4	NA	TRUE	NA	NA	NA	C	coding	247	744	113	856	10.0	-8986	False	AGTAAA	-14
PB.7136.3	chr20	-	3532	7	novel_in_catalog	AL049650.1	novel	823	7	NA	NA	-8	-14611	no_combination_of_known_junctions	FALSE	canonical	1	6454	junction_1	37389.538690283705	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1923	272	2194	45.0	-1	True	AATAAA	-25
PB.1.1	chr1	-	7786	10	novel_not_in_catalog	WASH7P	novel	1351	11	NA	NA	208	2	intron_retention	FALSE	canonical	1	457	junction_8	11632.387574842836	NA	2	NA	TRUE	NA	NA	NA	B	coding	182	549	5914	6462	40.0	NA	False	AATAAA	-17
PB.8825.1	chr4	+	2443	5	full-splice_match	THAP6	ENST00000311638.7	3549	5	-34	1140	1	-1140	multi-exon	FALSE	canonical	1	65512	junction_4	17934.257957886075	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	103	771	80.0	-34	False	NA	NA
PB.8613.6	chr3	+	3753	16	novel_not_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	-8	-661	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	42383.4570376488	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	1447	1947	100.0	-14	False	NA	NA
PB.10213.11	chr6	-	4936	29	full-splice_match	MED23	ENST00000368068.7	5233	29	25	272	1	240	multi-exon	FALSE	canonical	1	106016	junction_24	55359.41373706215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1368	4107	156	4262	40.0	25	True	AAGAAA	-25
PB.10213.10	chr6	-	5142	29	full-splice_match	MED23	ENST00000368068.7	5233	29	-13	104	-13	-88	multi-exon	FALSE	canonical	1	106016	junction_24	55359.41373706215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1368	4107	194	4300	30.0	-13	True	AATACA	-20
PB.11346.3	chr8	+	3337	9	incomplete-splice_match	PHF20L1	ENST00000622263.4	3375	21	-23	32732	-23	3	3prime_fragment	FALSE	canonical	1	29156	junction_5	122197.14675244059	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	345	1280	25.0	4	True	AATAAA	-17
PB.11346.2	chr8	+	1932	12	incomplete-splice_match	PHF20L1	ENST00000315808.14	2226	14	-69	7795	-27	-1424	3prime_fragment	FALSE	canonical	1	29156	junction_5	109274.5814213439	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1578	353	1930	75.0	0	True	NA	NA
PB.11346.1	chr8	+	2066	14	novel_in_catalog	PHF20L1	novel	3375	21	NA	NA	-36	-10	combination_of_known_junctions	FALSE	canonical	1	15824	junction_5	100263.5647152458	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1707	358	2064	75.0	-1228	False	NA	NA
PB.10683.8	chr7	-	2486	3	full-splice_match	PON2	ENST00000493469.5	579	3	-72	-1835	-5	-1297	multi-exon	FALSE	canonical	1	542312	junction_2	60794.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	22	339	70.0	-27	True	NA	NA
PB.11346.6	chr8	+	1898	12	novel_in_catalog	PHF20L1	novel	3375	21	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	1	68585	junction_1	68644.91559593873	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	338	1897	45.0	-42	True	AAAAAG	-37
PB.11346.5	chr8	+	2376	8	novel_in_catalog	PHF20L1	novel	3375	21	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	68585	junction_1	84723.71479734128	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	338	1195	35.0	-42	True	AATAAA	-18
PB.11346.4	chr8	+	1871	5	full-splice_match	PHF20L1	ENST00000485595.5	1810	5	-63	2	-23	-2	multi-exon	FALSE	canonical	1	98842	junction_1	92335.59526091495	NA	4	NA	TRUE	NA	NA	NA	C	coding	160	483	345	827	10.0	4	True	AATAAA	-18
PB.10683.4	chr7	-	1585	9	full-splice_match	PON2	ENST00000433091.6	1726	9	158	-17	-10	0	multi-exon	FALSE	canonical	1	202998	junction_5	328244.6752651709	NA	3	1	TRUE	NA	NA	NA	C	coding	363	1092	27	1118	15.0	-32	True	ATTAAA	-36
PB.10683.5	chr7	-	1295	9	full-splice_match	PON2	ENST00000633531.1	1653	9	53	305	9	110	multi-exon	FALSE	canonical	1	542312	junction_8	260669.61122292213	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	6	1133	70.0	-11	True	NA	NA
PB.10683.6	chr7	-	3222	3	full-splice_match	PON2	ENST00000493469.5	579	3	-115	-2528	-6	-604	multi-exon	FALSE	canonical	1	542312	junction_2	60794.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	65	382	60.0	307	False	NA	NA
PB.10683.7	chr7	-	2581	4	novel_not_in_catalog	PON2	novel	1653	9	NA	NA	-11	-604	intron_retention	FALSE	non_canonical	0	0	junction_1	288607.9093522329	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	28	345	60.0	-33	True	NA	NA
PB.10683.1	chr7	-	2739	9	full-splice_match	PON2	ENST00000633531.1	1653	9	44	-1130	0	1130	multi-exon	FALSE	canonical	1	542312	junction_8	260669.61122292213	NA	9	1	TRUE	NA	NA	NA	C	coding	375	1128	15	1142	40.0	-20	True	TATAAA	-24
PB.10683.2	chr7	-	1727	9	full-splice_match	PON2	ENST00000633531.1	1653	9	-74	0	-20	0	multi-exon	FALSE	canonical	1	542312	junction_8	260669.61122292213	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	133	1260	15.0	239	False	ATTAAA	-36
PB.10683.3	chr7	-	1605	9	novel_not_in_catalog	PON2	novel	1653	9	NA	NA	-20	0	any annotated donor/acceptor	FALSE	canonical	1	42057	junction_6	377722.34248020645	NA	3	1	TRUE	NA	NA	NA	C	coding	267	804	335	1138	15.0	-42	True	ATTAAA	-36
PB.11954.8	chrX	-	3729	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-4	-18	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	191.69413136556892	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	416	823	85.0	NA	False	NA	NA
PB.11954.9	chrX	-	3558	4	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-17	-18	any annotated donor/acceptor	FALSE	canonical	1	11	junction_2	300.6526234710085	NA	1	1	TRUE	NA	NA	NA	C	coding	135	408	429	836	85.0	NA	False	NA	NA
PB.11954.4	chrX	-	2410	5	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	242	2018	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	286.7477114119658	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	170	577	25.0	NA	False	NA	NA
PB.11954.5	chrX	-	3842	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-22	-12	any annotated donor/acceptor	FALSE	canonical	1	41	junction_4	603.6474467766761	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	434	841	80.0	NA	False	NA	NA
PB.11954.6	chrX	-	3822	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-36	-18	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	543.9200676570042	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	448	855	85.0	NA	False	NA	NA
PB.11954.7	chrX	-	3728	5	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-43	-18	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	233.92039244153128	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	455	862	85.0	NA	False	NA	NA
PB.11954.1	chrX	-	2306	7	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	10	4773	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	235.42827405012812	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	402	809	85.0	NA	False	NA	NA
PB.11954.2	chrX	-	2293	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-17	4773	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	252.97399075794334	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	429	836	85.0	NA	False	NA	NA
PB.11954.3	chrX	-	1942	4	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-17	4773	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	294.7024865106427	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	429	836	85.0	NA	False	NA	NA
PB.1822.16	chr11	+	4574	29	full-splice_match	USP47	ENST00000399455.2	7396	29	-96	2918	-5	-16	multi-exon	FALSE	canonical	1	17435	junction_2	130199.44876318994	NA	0	NA	TRUE	NA	NA	NA	C	coding	1375	4128	217	4344	90.0	-5	True	NA	NA
PB.1822.17	chr11	+	5185	8	incomplete-splice_match	USP47	ENST00000527733.5	4525	28	10	46858	10	24858	3prime_fragment	FALSE	canonical	1	170913	junction_1	63919.063571337894	NA	7	NA	TRUE	NA	NA	NA	C	coding	344	1035	202	1236	10.0	10	True	AGTAAA	-12
PB.1822.14	chr11	+	1935	15	incomplete-splice_match	USP47	ENST00000527733.5	4525	28	-7	23352	-7	-10080	3prime_fragment	FALSE	canonical	1	170913	junction_1	62726.022020329794	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1716	219	1934	70.0	-7	True	ATTAAA	-29
PB.1822.15	chr11	+	4681	28	full-splice_match	USP47	ENST00000527733.5	4525	28	-5	-151	-5	151	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	217	4284	30.0	-5	True	AATAAA	-19
PB.2956.9	chr12	+	3084	17	novel_in_catalog	RNF10	novel	321	2	NA	NA	-2	1	intron_retention	TRUE	canonical	1	3539	junction_13	567289.0950912947	NA	3	2	TRUE	NA	NA	NA	C	coding	689	2070	459	2528	15.0	-2	True	AATAAA	-16
PB.2956.8	chr12	+	2822	15	novel_in_catalog	RNF10	novel	321	2	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	4341	junction_2	489803.16180053493	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2145	459	2603	20.0	-2	True	AATAAA	-14
PB.1822.10	chr11	+	4171	28	full-splice_match	USP47	ENST00000527733.5	4525	28	-12	366	-12	-366	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	2	NA	TRUE	NA	NA	NA	C	coding	1316	3948	224	4171	55.0	-12	True	AAGAAA	-11
PB.1822.11	chr11	+	4863	27	full-splice_match	USP47	ENST00000339865.9	7775	27	543	2369	-9	9	multi-exon	FALSE	canonical	1	48142	junction_1	112554.38039683213	NA	1	1	TRUE	NA	NA	NA	C	coding	1287	3864	221	4084	30.0	-9	True	AATAAA	-34
PB.2956.5	chr12	+	3015	16	novel_in_catalog	RNF10	novel	321	2	NA	NA	2	1	intron_retention	FALSE	canonical	1	101863	junction_13	482092.3695038074	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	460	2562	15.0	-3	True	AATAAA	-16
PB.2956.4	chr12	+	3399	17	full-splice_match	RNF10	ENST00000325954.8	3825	17	2	424	2	-77	multi-exon	FALSE	canonical	1	593763	junction_1	357248.63204756903	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	460	2895	20.0	-3	True	AATAAA	-18
PB.2956.7	chr12	+	3233	18	novel_in_catalog	RNF10	novel	321	2	NA	NA	-2	16	intron_retention	FALSE	canonical	1	30315	junction_1	523354.4921569095	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	713	2995	15.0	-2	True	AATAAA	-33
PB.2956.6	chr12	+	3386	16	novel_in_catalog	RNF10	novel	321	2	NA	NA	-2	0	intron_retention	FALSE	canonical	1	593763	junction_1	358309.8172449585	NA	1	1	TRUE	NA	NA	NA	C	coding	453	1362	459	1820	30.0	-2	True	AATAAA	-11
PB.2956.1	chr12	+	2863	13	incomplete-splice_match	RNF10	ENST00000325954.8	3825	17	-6	10259	-6	393	3prime_fragment	FALSE	canonical	1	593763	junction_1	372337.72618659737	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	468	2573	70.0	-11	True	NA	NA
PB.2956.3	chr12	+	3715	16	novel_in_catalog	RNF10	novel	321	2	NA	NA	2	-7	intron_retention	FALSE	canonical	1	101863	junction_13	482092.3695038074	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	460	2562	10.0	-3	True	AATAAA	-15
PB.2956.2	chr12	+	3816	17	full-splice_match	RNF10	ENST00000325954.8	3825	17	3	6	-2	-6	multi-exon	FALSE	canonical	1	593763	junction_1	357248.63204756903	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	459	2894	5.0	-2	True	AATAAA	-16
PB.11716.13	chr9	-	5802	50	novel_in_catalog	ECPAS	novel	7078	49	NA	NA	117	-3	no_combination_of_known_junctions	TRUE	canonical	1	20701	junction_49	233871.96356700652	NA	0	NA	TRUE	NA	NA	NA	C	coding	1839	5520	142	5661	25.0	-1	True	AATAAA	-14
PB.1283.9	chr10	+	2422	2	incomplete-splice_match	RBM17	ENST00000465906.5	914	3	-508	91	153	-23	intron_retention	FALSE	canonical	1	739286	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	536	916	55.0	NA	False	TATAAA	-10
PB.1283.1	chr10	+	2758	11	novel_in_catalog	RBM17	novel	2755	12	NA	NA	6	-23	intron_retention	FALSE	canonical	1	290837	junction_1	252233.95538192315	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	220	1176	55.0	1	True	TATAAA	-10
PB.1283.3	chr10	+	2672	12	full-splice_match	RBM17	ENST00000379888.8	2755	12	34	49	-33	-49	multi-exon	FALSE	canonical	1	290837	junction_1	245541.81954527277	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	192	1397	15.0	-13	True	AATAAA	-14
PB.1283.2	chr10	+	2318	12	novel_in_catalog	RBM17	novel	2755	12	NA	NA	7	-23	combination_of_known_junctions	FALSE	canonical	1	56063	junction_8	287586.8726536283	NA	3	NA	TRUE	NA	NA	NA	C	coding	318	957	219	1175	55.0	2	True	TATAAA	-10
PB.1283.5	chr10	+	1698	12	full-splice_match	RBM17	ENST00000379888.8	2755	12	49	1008	-18	0	multi-exon	FALSE	canonical	1	290837	junction_1	245541.81954527277	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	177	1382	100.0	2	True	NA	NA
PB.1283.4	chr10	+	2410	12	novel_in_catalog	RBM17	novel	2755	12	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	56063	junction_8	287586.8726536283	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	182	1138	100.0	-3	True	NA	NA
PB.1283.7	chr10	+	1548	12	full-splice_match	RBM17	ENST00000379888.8	2755	12	70	1137	3	-23	multi-exon	FALSE	canonical	1	290837	junction_1	245541.81954527277	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	156	1361	55.0	23	True	TATAAA	-10
PB.1283.6	chr10	+	2334	12	full-splice_match	RBM17	ENST00000379888.8	2755	12	67	354	0	-354	multi-exon	FALSE	canonical	1	290837	junction_1	245541.81954527277	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	159	1364	75.0	20	True	NA	NA
PB.10074.1	chr6	+	3287	4	full-splice_match	SH3BGRL2	ENST00000369838.5	4653	4	-9	1375	-9	-1375	multi-exon	FALSE	canonical	1	190960	junction_1	40044.586808539636	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	189	512	40.0	0	True	AATAAA	-29
PB.10074.2	chr6	+	3486	4	full-splice_match	SH3BGRL2	ENST00000369838.5	4653	4	8	1159	8	-1159	multi-exon	FALSE	canonical	1	190960	junction_1	40044.586808539636	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	172	495	55.0	-12	True	AATAAA	-7
PB.10074.3	chr6	+	4634	4	full-splice_match	SH3BGRL2	ENST00000369838.5	4653	4	13	6	13	-6	multi-exon	FALSE	canonical	1	190960	junction_1	40044.586808539636	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	167	490	20.0	-7	True	NA	NA
PB.9840.5	chr6	-	3335	9	full-splice_match	TRIM26	ENST00000453195.5	3318	9	-19	2	-19	-2	multi-exon	FALSE	canonical	1	54559	junction_8	82533.46898976424	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	297	1916	30.0	665	False	NA	NA
PB.8068.11	chr3	+	2514	20	full-splice_match	SACM1L	ENST00000389061.9	3723	20	134	1075	39	414	multi-exon	FALSE	canonical	1	249581	junction_4	76960.54547868493	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	71	1834	65.0	0	True	NA	NA
PB.8068.10	chr3	+	3066	19	incomplete-splice_match	SACM1L	ENST00000389061.9	3723	20	134	4411	39	1106	3prime_fragment	FALSE	canonical	1	249581	junction_4	79000.4139315027	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	71	1786	35.0	0	True	AATAAA	-18
PB.8046.3	chr3	-	1319	4	full-splice_match	HIGD1A	ENST00000321331.11	1373	4	51	3	8	-3	multi-exon	FALSE	canonical	1	451491	junction_1	82140.31763999943	NA	0	NA	TRUE	NA	NA	NA	C	coding	93	282	68	349	25.0	7	True	ATTAAA	-17
PB.9840.7	chr6	-	3175	9	novel_not_in_catalog	TRIM26	novel	3114	3	NA	NA	1	-6	any annotated donor/acceptor	FALSE	canonical	1	7828	junction_4	116329.4694074093	NA	2	1	TRUE	NA	NA	NA	C	coding	462	1389	372	1760	35.0	-26	True	NA	NA
PB.8046.5	chr3	-	2334	1	novel_in_catalog	AC006059.2	novel	602	5	NA	NA	11	-44997	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	-20	True	NA	NA
PB.8046.4	chr3	-	1596	5	novel_not_in_catalog	AC006059.2	novel	5555	17	NA	NA	-5	-27125	any annotated donor/acceptor	TRUE	canonical	1	8065	junction_2	234527.88264124907	NA	0	NA	TRUE	NA	NA	NA	B	coding	59	180	120	299	25.0	-11	True	ATTAAA	-16
PB.10312.3	chr6	-	4203	5	full-splice_match	SOD2	ENST00000538183.6	14266	5	1	10062	1	0	multi-exon	FALSE	canonical	1	2891425	junction_4	408425.8157474868	NA	2	NA	TRUE	NA	NA	NA	C	coding	222	669	161	829	30.0	1112	False	AATAAA	-18
PB.3406.4	chr14	+	4088	14	incomplete-splice_match	FANCM	ENST00000267430.9	7111	23	-6	24136	1	9328	3prime_fragment	FALSE	canonical	1	28937	junction_3	7710.808113506236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1332	3996	92	4087	60.0	1	True	AATGAA	-44
PB.2677.10	chr12	-	3650	17	novel_in_catalog	CS	novel	2811	11	NA	NA	-15683	0	intron_retention	FALSE	canonical	1	3310	junction_11	624128.1154978194	NA	1	NA	TRUE	NA	NA	NA	C	coding	662	1989	281	2269	30.0	440	False	AATAAA	-14
PB.8582.23	chr3	-	2142	13	full-splice_match	ETV5	ENST00000306376.9	4111	13	23	1946	-8	-2	multi-exon	FALSE	canonical	1	44807	junction_12	67385.64660758419	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	225	1757	30.0	-1	True	ACTAAA	-14
PB.10885.4	chr7	-	3207	8	novel_in_catalog	MKRN1	novel	3151	8	NA	NA	-32	-26	combination_of_known_junctions	FALSE	canonical	1	7683	junction_7	182818.1340708379	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	744	1763	80.0	406	False	NA	NA
PB.10886.1	chr7	+	2386	8	full-splice_match	ADCK2	ENST00000072869.8	2377	8	-20	11	-20	-11	multi-exon	FALSE	canonical	1	233916	junction_1	11162.398365284502	NA	0	NA	TRUE	NA	NA	NA	A	coding	626	1881	199	2079	10.0	-3479	False	AATAAA	-16
PB.5845.1	chr19	-	1765	9	full-splice_match	FKBP8	ENST00000608443.5	1849	9	87	-3	0	3	multi-exon	FALSE	canonical	1	2354074	junction_4	934149.9087040313	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	114	1355	15.0	-1	True	AATAAA	-20
PB.4093.1	chr15	-	3056	3	full-splice_match	RGMA	ENST00000542321.6	3038	3	-11	-7	-11	-3	multi-exon	FALSE	canonical	1	146903	junction_1	12617.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	432	1299	169	1467	15.0	-23	True	AGTAAA	-25
PB.5845.2	chr19	-	1657	10	novel_not_in_catalog	FKBP8	novel	1781	9	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1353211.447001868	NA	1	1	TRUE	NA	NA	NA	C	coding	413	1242	121	1362	15.0	-8	True	AATAAA	-17
PB.3170.2	chr13	-	3019	5	full-splice_match	SPRYD7	ENST00000361840.7	3053	5	37	-3	4	3	multi-exon	FALSE	canonical	1	250726	junction_4	16227.29415791493	NA	3	NA	TRUE	NA	NA	NA	C	coding	196	591	69	659	20.0	4	True	ATTAAA	-23
PB.3170.3	chr13	-	2662	6	novel_not_in_catalog	SPRYD7	novel	3053	5	NA	NA	-2	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	112338.8557349593	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	108	698	20.0	-35	True	ATTAAA	-21
PB.3170.1	chr13	-	2461	6	novel_not_in_catalog	SPRYD7	novel	3053	5	NA	NA	-6	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	112338.8557349593	NA	2	1	TRUE	NA	NA	NA	C	coding	196	591	112	702	25.0	-39	True	ATTAAA	-34
PB.10885.6	chr7	-	2846	8	novel_in_catalog	MKRN1	novel	3151	8	NA	NA	4	-26	combination_of_known_junctions	FALSE	canonical	1	23497	junction_2	177818.73861563957	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	21	1334	80.0	-1	True	NA	NA
PB.3170.4	chr13	-	1482	5	full-splice_match	SPRYD7	ENST00000361840.7	3053	5	0	1571	0	-1567	multi-exon	FALSE	canonical	1	250726	junction_4	16227.29415791493	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	106	696	50.0	-33	True	AATAAA	-17
PB.3170.5	chr13	-	1066	5	full-splice_match	SPRYD7	ENST00000361840.7	3053	5	32	1955	-1	-1951	multi-exon	FALSE	canonical	1	250726	junction_4	16227.29415791493	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	74	664	15.0	-1	True	ATTAAA	-23
PB.10885.7	chr7	-	2885	8	novel_not_in_catalog	MKRN1	novel	3151	8	NA	NA	4	-26	any annotated donor/acceptor	FALSE	canonical	1	1845	junction_6	181843.02453916403	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	422	1441	80.0	-1	True	NA	NA
PB.10312.5	chr6	-	3137	6	novel_not_in_catalog	SOD2	novel	14266	5	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1673154.7344920135	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	206	736	30.0	8	True	AATAAA	-18
PB.10828.25	chr7	+	3386	8	novel_not_in_catalog	CALU	novel	3210	6	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	842	junction_2	1081441.1015892127	NA	7	2	TRUE	NA	NA	NA	C	coding	315	948	133	1080	25.0	-7	True	AATAAA	-14
PB.10294.4	chr6	+	4581	13	novel_in_catalog	TIAM2	novel	6981	29	NA	NA	-16	0	intron_retention	FALSE	canonical	1	30010	junction_2	146086.6036963035	NA	8	NA	TRUE	NA	NA	NA	C	coding	419	1260	3253	4512	100.0	-4	True	TTTAAA	-23
PB.10294.6	chr6	+	2173	13	full-splice_match	TIAM2	ENST00000275246.11	2491	13	288	30	-41	0	multi-exon	FALSE	canonical	1	14207	junction_1	146443.68531289027	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	224	2104	100.0	-4477	False	TTTAAA	-23
PB.10312.4	chr6	-	3110	5	novel_not_in_catalog	SOD2	novel	14266	5	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1721443.5182501632	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	158	709	30.0	1115	False	AATAAA	-18
PB.101.6	chr1	+	1992	6	full-splice_match	MIIP	ENST00000466860.5	1709	6	-215	-68	-215	0	multi-exon	FALSE	canonical	1	302373	junction_1	82073.25352049839	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	2506	False	AATAAA	-20
PB.10294.1	chr6	+	2798	18	incomplete-splice_match	TIAM2	ENST00000456877.6	3275	21	27722	11	-6484	-1	5prime_fragment	FALSE	canonical	1	25178	junction_2	127539.38461556747	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	148	2730	95.0	-6563	False	TTTAAA	-22
PB.10294.2	chr6	+	2421	15	novel_not_in_catalog	TIAM2	novel	6981	29	NA	NA	-468	0	any annotated donor/acceptor	FALSE	canonical	1	263	junction_1	138730.8969247695	NA	1	NA	TRUE	NA	NA	NA	C	coding	760	2283	70	2352	100.0	-547	False	TTTAAA	-23
PB.10885.1	chr7	-	3083	8	full-splice_match	MKRN1	ENST00000255977.6	3151	8	34	34	1	-27	multi-exon	FALSE	canonical	1	313508	junction_6	87226.03828875309	NA	30	NA	TRUE	NA	NA	NA	C	coding	482	1449	192	1640	75.0	-31	True	NA	NA
PB.10141.1	chr6	-	3506	8	full-splice_match	PDSS2	ENST00000369037.8	3540	8	-7	41	-6	-41	multi-exon	FALSE	canonical	1	88221	junction_2	16931.709741650728	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	286	1485	80.0	-15	True	NA	NA
PB.11180.7	chr8	+	3075	5	novel_not_in_catalog	MSC-AS1	novel	485	4	NA	NA	-8	-1352	any annotated donor/acceptor	FALSE	canonical	1	617	junction_3	29189.00000856487	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	419	925	20.0	-51	True	AATAAA	-20
PB.4300.2	chr16	+	1556	5	full-splice_match	METTL9	ENST00000358154.7	3256	5	162	1538	46	-184	multi-exon	FALSE	canonical	1	815486	junction_1	214970.8760216137	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	97	1053	25.0	46	True	AATAAA	-15
PB.4300.3	chr16	+	2903	5	full-splice_match	METTL9	ENST00000358154.7	3256	5	69	284	-13	-282	multi-exon	FALSE	canonical	1	815486	junction_1	214970.8760216137	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	190	1146	65.0	-5753	False	AATACA	-23
PB.4300.4	chr16	+	3090	5	full-splice_match	METTL9	ENST00000358154.7	3256	5	163	3	47	-1	multi-exon	FALSE	canonical	1	815486	junction_1	214970.8760216137	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	96	1052	15.0	47	True	AATAAA	-18
PB.4300.5	chr16	+	3356	4	incomplete-splice_match	METTL9	ENST00000396014.8	1817	5	32	28543	-2	2343	3prime_fragment	FALSE	canonical	1	815486	junction_1	233395.01216083334	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	145	918	45.0	-2	True	AATAAA	-24
PB.4300.6	chr16	+	3072	5	novel_in_catalog	METTL9	novel	763	5	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	6337	junction_1	548768.3652796391	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	457	1035	15.0	-9	True	AATAAA	-17
PB.4300.7	chr16	+	2956	4	novel_in_catalog	METTL9	novel	763	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	58176	junction_1	479210.585285379	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	336	917	15.0	-9	True	AATAAA	-19
PB.4300.8	chr16	+	1400	4	novel_in_catalog	METTL9	novel	763	5	NA	NA	10	-185	combination_of_known_junctions	FALSE	canonical	1	58176	junction_1	479210.585285379	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	317	898	20.0	10	True	AATAAA	-14
PB.4300.9	chr16	+	3145	4	incomplete-splice_match	METTL9	ENST00000396014.8	1817	5	61	28725	27	2161	3prime_fragment	FALSE	canonical	1	815486	junction_1	233395.01216083334	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	116	889	80.0	27	True	NA	NA
PB.3296.6	chr14	+	5748	23	novel_in_catalog	ARHGEF40	novel	5919	24	NA	NA	11	5	combination_of_known_junctions	FALSE	canonical	1	41474	junction_20	66915.45137550213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1471	4416	96	4511	30.0	-2	True	AATAAA	-22
PB.3296.1	chr14	+	5196	24	novel_in_catalog	ARHGEF40	novel	5919	24	NA	NA	-37	-1	no_combination_of_known_junctions	FALSE	canonical	1	7449	junction_2	68828.05302124747	NA	0	NA	TRUE	NA	NA	NA	C	coding	1327	3984	677	4660	25.0	-840	False	ATTAAA	-14
PB.787.7	chr1	-	3573	13	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-6894	-2661	any annotated donor/acceptor	FALSE	canonical	1	1298	junction_1	542388.8764875919	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	222	2069	15.0	-1	True	ATTAAA	-16
PB.3296.3	chr14	+	5253	24	full-splice_match	ARHGEF40	ENST00000298694.8	5919	24	-20	686	-20	-1	multi-exon	FALSE	canonical	1	52091	junction_1	55855.61217757414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1519	4560	148	4707	30.0	-10	True	ATTAAA	-24
PB.3296.2	chr14	+	5978	22	novel_in_catalog	ARHGEF40	novel	5919	24	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	52091	junction_1	58224.20266217699	NA	1	NA	TRUE	NA	NA	NA	C	coding	1498	4497	155	4651	30.0	-17	True	ATTAAA	-24
PB.3724.48	chr15	+	2244	6	full-splice_match	NIPA2	ENST00000398013.7	2280	6	39	-3	28	3	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	290	1372	35.0	37	True	AATAAA	-12
PB.3724.49	chr15	+	2390	6	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	135	3	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	436	1518	35.0	-100	False	AATAAA	-12
PB.3724.44	chr15	+	2611	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	0	211	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	449	1531	25.0	0	True	NA	NA
PB.3724.45	chr15	+	2944	6	full-splice_match	NIPA2	ENST00000398013.7	2280	6	8	-672	-3	4	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	321	1403	20.0	6	True	AATAAA	-25
PB.3724.46	chr15	+	2491	8	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	1	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	537	1619	35.0	10	True	AATAAA	-12
PB.3724.47	chr15	+	2821	10	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	22	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	872	1954	40.0	31	True	AATAAA	-7
PB.3724.40	chr15	+	2541	8	full-splice_match	NIPA2	ENST00000337451.7	3233	8	27	665	0	3	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	587	1669	35.0	-2	True	AATAAA	-12
PB.3724.41	chr15	+	2100	7	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	0	-331	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	19	2	TRUE	NA	NA	NA	C	coding	360	1083	480	1562	70.0	-2	True	AATGAA	-17
PB.3724.42	chr15	+	3359	9	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	738	1820	20.0	0	True	AATAAA	-23
PB.3724.43	chr15	+	2895	5	full-splice_match	NIPA2	ENST00000539711.2	1412	5	-9	-1474	0	6	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	327	1352	25.0	0	True	AATAAA	-27
PB.9610.9	chr5	-	4041	7	full-splice_match	PANK3	ENST00000239231.6	10506	7	241	6224	-9	2892	multi-exon	FALSE	canonical	1	73904	junction_5	72798.59793159175	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	77	1189	30.0	-1	True	AATAAA	-8
PB.9610.8	chr5	-	4638	7	full-splice_match	PANK3	ENST00000239231.6	10506	7	233	5635	-17	3481	multi-exon	FALSE	canonical	1	73904	junction_5	72798.59793159175	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	85	1197	70.0	-9	True	CATAAA	-28
PB.3802.10	chr15	-	3183	25	full-splice_match	VPS39	ENST00000318006.9	4844	25	0	1661	0	69	multi-exon	FALSE	canonical	1	230918	junction_21	94211.01785792565	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	164	2791	25.0	-13	True	NA	NA
PB.3802.11	chr15	-	3252	25	novel_in_catalog	VPS39	novel	4844	25	NA	NA	3	-288	combination_of_known_junctions	FALSE	canonical	1	4355	junction_1	118648.97808284809	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	152	2734	20.0	-1	True	AATAAA	-21
PB.9610.4	chr5	-	10300	7	full-splice_match	PANK3	ENST00000239231.6	10506	7	205	1	-45	-1	multi-exon	FALSE	canonical	1	73904	junction_5	72798.59793159175	NA	4	NA	TRUE	NA	NA	NA	C	coding	370	1113	113	1225	15.0	214	False	AATAAA	-19
PB.9610.7	chr5	-	2211	1	incomplete-splice_match	PANK3	ENST00000239231.6	10506	7	27460	1435	13924	-1435	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	8761	False	NA	NA
PB.9610.6	chr5	-	5371	1	full-splice_match	SLC2A3P1	ENST00000519666.1	1451	1	-139	-3781	-139	3781	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	7035	False	AATAAA	-19
PB.4083.1	chr15	+	5243	24	novel_in_catalog	MAN2A2	novel	1049	4	NA	NA	-5	8	intron_retention	TRUE	canonical	1	18320	junction_1	123559.74383157327	NA	0	NA	TRUE	NA	NA	NA	B	coding	1150	3453	376	3828	35.0	-10	True	NA	NA
PB.4083.2	chr15	+	5017	23	novel_in_catalog	MAN2A2	novel	1049	4	NA	NA	18	7	intron_retention	FALSE	canonical	1	3567	junction_1	118468.32287690467	NA	2	NA	TRUE	NA	NA	NA	B	coding	1150	3453	151	3603	40.0	13	True	NA	NA
PB.4083.3	chr15	+	5045	23	novel_in_catalog	MAN2A2	novel	1049	4	NA	NA	306	7	intron_retention	FALSE	canonical	1	78433	junction_15	114664.90256248084	NA	2	NA	TRUE	NA	NA	NA	B	coding	796	2391	154	2544	40.0	-4	True	NA	NA
PB.11775.5	chr9	-	1920	2	full-splice_match	ZBTB26	ENST00000373656.3	4443	2	-8	2531	-8	3	multi-exon	FALSE	canonical	1	21396	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	C	coding	441	1326	83	1408	15.0	1	True	GATAAA	-18
PB.8582.20	chr3	-	2487	13	full-splice_match	ETV5	ENST00000306376.9	4111	13	119	1505	6	439	multi-exon	FALSE	canonical	1	44807	junction_12	67385.64660758419	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	129	1661	85.0	-1	True	TATAAA	-30
PB.11775.1	chr9	-	4513	2	full-splice_match	ZBTB26	ENST00000373656.3	4443	2	-73	3	-73	-3	multi-exon	FALSE	canonical	1	21396	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	148	1473	20.0	9674	False	AATAAA	-13
PB.11775.3	chr9	-	3822	2	full-splice_match	ZBTB26	ENST00000373656.3	4443	2	-37	658	-37	-658	multi-exon	FALSE	canonical	1	21396	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	112	1437	35.0	-28	True	AATAAA	-30
PB.10450.12	chr7	+	2528	7	full-splice_match	SNX10	ENST00000396376.5	2491	7	-49	12	-49	0	multi-exon	FALSE	canonical	1	7933	junction_1	129674.29150375181	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	178	783	50.0	-30	False	ATTAAA	-5
PB.8094.12	chr3	-	5108	19	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	5	0	intron_retention	TRUE	canonical	1	15598	junction_13	89555.9688025515	NA	12	NA	TRUE	NA	NA	NA	C	coding	633	1902	1855	3756	15.0	11	True	AATAAA	-14
PB.8094.13	chr3	-	4845	18	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	128398	junction_4	79059.62116583796	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	1867	2877	15.0	-1	True	AATAAA	-13
PB.8094.10	chr3	-	2466	20	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	14584	junction_16	101961.54766484533	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	85	2205	15.0	-17	True	AATAAA	-14
PB.8094.11	chr3	-	5245	19	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	11	0	intron_retention	FALSE	canonical	1	133922	junction_14	75983.34838707169	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	1878	3893	15.0	-12	True	AATAAA	-14
PB.8094.14	chr3	-	2680	22	novel_not_in_catalog	SLC26A6	novel	2630	21	NA	NA	-7	-1	any annotated donor/acceptor	TRUE	canonical	1	396	junction_21	98441.66026273352	NA	1	1	TRUE	NA	NA	NA	C	coding	737	2214	207	2420	15.0	-1	True	AATAAA	-13
PB.8094.15	chr3	-	2591	21	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	62300	junction_13	87585.27000613458	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	1258	2331	15.0	-16	True	AATAAA	-13
PB.1792.2	chr11	+	1776	13	full-splice_match	ILK	ENST00000299421.8	1802	13	22	4	-5	0	multi-exon	FALSE	canonical	1	350151	junction_1	467345.0522162102	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	163	1521	30.0	-21	True	AATAAA	-11
PB.1792.3	chr11	+	2404	1	novel_in_catalog	ILK	novel	1617	12	NA	NA	-4	1446	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-5	True	NA	NA
PB.1792.1	chr11	+	1731	13	full-splice_match	ILK	ENST00000420936.6	1692	13	-6	-33	-6	0	multi-exon	FALSE	canonical	1	649424	junction_1	404780.9611301027	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	118	1476	30.0	-22	True	AATAAA	-11
PB.1792.4	chr11	+	2000	11	novel_in_catalog	ILK	novel	1617	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	350151	junction_1	510878.03063040396	NA	1	1	TRUE	NA	NA	NA	C	coding	187	564	142	705	30.0	0	True	AATAAA	-11
PB.1792.5	chr11	+	1926	12	full-splice_match	ILK	ENST00000396751.6	2074	12	144	4	144	0	multi-exon	FALSE	canonical	1	971207	junction_1	296581.34632480633	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	313	1671	30.0	-8369	False	AATAAA	-11
PB.11503.12	chr9	+	4601	24	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	71844	junction_11	83784.14916861818	NA	18	1	TRUE	NA	NA	NA	C	coding	1121	3366	58	3423	10.0	-11	True	ATTAAA	-18
PB.7047.5	chr2	+	2451	7	full-splice_match	RHBDD1	ENST00000341329.7	4883	7	108	2324	0	990	multi-exon	FALSE	canonical	1	47157	junction_1	56981.20252158211	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	135	1082	70.0	-10	True	NA	NA
PB.459.3	chr1	+	4970	15	full-splice_match	MIER1	ENST00000357692.6	4978	15	4	4	2	-3	multi-exon	FALSE	canonical	1	21367	junction_2	126642.68550975398	NA	3	NA	TRUE	NA	NA	NA	C	coding	529	1590	254	1843	25.0	-9628	False	AATAAA	-15
PB.11503.13	chr9	+	3467	17	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	4	-233	any annotated donor/acceptor	TRUE	canonical	1	2194	junction_2	113814.7013409948	NA	4	NA	TRUE	NA	NA	NA	C	coding	556	1671	1047	2717	80.0	-11	True	NA	NA
PB.10852.1	chr7	-	1572	8	full-splice_match	CHCHD3	ENST00000262570.9	1598	8	21	5	9	-5	multi-exon	FALSE	canonical	1	74671	junction_6	370617.7399149607	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	125	808	30.0	25	True	AATAAA	-14
PB.992.5	chr1	-	3379	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	42	971	42	-971	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	2	NA	TRUE	NA	NA	NA	C	coding	730	2193	237	2429	70.0	13	True	TATAAA	-36
PB.3380.1	chr14	-	4375	4	full-splice_match	CFL2	ENST00000298159.10	6747	4	18	2354	18	1264	multi-exon	FALSE	canonical	1	540307	junction_3	207700.68591766054	NA	5	NA	TRUE	NA	NA	NA	C	coding	166	501	133	633	50.0	-1	True	ATTAAA	-11
PB.5068.19	chr17	+	2575	10	incomplete-splice_match	NPEPPS	ENST00000530514.5	2092	16	13338	-1152	-2042	-7	5prime_fragment	FALSE	canonical	1	698830	junction_1	139967.67915963076	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	87	1226	30.0	NA	False	AATAAA	-13
PB.9870.18	chr6	-	2262	6	incomplete-splice_match	DDX39B	ENST00000396172.5	2133	11	444	3808	-1	-1247	3prime_fragment	FALSE	canonical	1	855812	junction_5	876672.3717049602	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	188	1060	85.0	-2	True	NA	NA
PB.11141.2	chr8	-	6552	4	incomplete-splice_match	IMPAD1	ENST00000262644.8	7199	5	13644	4	-88	-4	5prime_fragment	FALSE	canonical	1	556015	junction_3	18751.56998464099	NA	1	NA	TRUE	NA	NA	NA	B	coding	167	504	193	696	35.0	NA	False	AATAAA	-13
PB.5068.10	chr17	+	3439	24	novel_not_in_catalog	NPEPPS	novel	649	6	NA	NA	-27	1103	any annotated donor/acceptor	FALSE	canonical	1	3529	junction_10	356630.22583964304	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	179	2806	75.0	0	True	NA	NA
PB.5068.11	chr17	+	3098	24	novel_not_in_catalog	NPEPPS	novel	649	6	NA	NA	-27	0	any annotated donor/acceptor	FALSE	canonical	1	3529	junction_10	364156.7118939198	NA	0	NA	TRUE	NA	NA	NA	C	coding	880	2643	179	2821	85.0	0	True	ATTAAA	-33
PB.5068.12	chr17	+	3971	22	novel_in_catalog	NPEPPS	novel	649	6	NA	NA	-6	-7	no_combination_of_known_junctions	FALSE	canonical	1	1376	junction_18	353046.6861062666	NA	2	NA	TRUE	NA	NA	NA	C	coding	856	2571	52	2622	30.0	-14	True	AATAAA	-13
PB.6217.2	chr19	-	1573	8	novel_in_catalog	HSPBP1	novel	1768	9	NA	NA	7	3	combination_of_known_junctions	TRUE	canonical	1	47451	junction_7	250770.5954936601	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	236	1315	5.0	39	True	AATAAA	-20
PB.9114.3	chr5	+	3208	3	novel_not_in_catalog	PDCD6	novel	1135	6	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	8026	junction_2	531026.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-6
PB.5068.16	chr17	+	3148	16	incomplete-splice_match	NPEPPS	ENST00000322157.8	4353	23	55298	25	9	-25	5prime_fragment	FALSE	canonical	1	3529	junction_3	281981.2864520544	NA	2	NA	TRUE	NA	NA	NA	C	coding	602	1809	9	1817	55.0	NA	False	ATTAAA	-15
PB.9114.1	chr5	+	3492	5	novel_in_catalog	PDCD6	novel	1135	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	609891	junction_2	488480.9399722649	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	2668	3033	10.0	-2	True	AATAAA	-18
PB.12229.2	chrX	-	3340	8	full-splice_match	KLHL13	ENST00000540167.5	3396	8	57	-1	-10	0	multi-exon	FALSE	canonical	1	5945	junction_7	35627.49884454938	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	326	2245	20.0	-15	True	AATAAA	-15
PB.12229.3	chrX	-	3562	13	novel_not_in_catalog	KLHL13	novel	3256	7	NA	NA	166	0	any annotated donor/acceptor	FALSE	canonical	1	25	junction_10	41684.387267347076	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	654	2468	20.0	161	False	AATAAA	-14
PB.7047.4	chr2	+	2102	7	full-splice_match	RHBDD1	ENST00000341329.7	4883	7	100	2681	2	633	multi-exon	FALSE	canonical	1	47157	junction_1	56981.20252158211	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	143	1090	25.0	-18	True	AATAAA	-20
PB.12229.1	chrX	-	3273	7	full-splice_match	KLHL13	ENST00000371882.5	3256	7	-17	0	-17	0	multi-exon	FALSE	canonical	1	47599	junction_6	16346.116837544832	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	337	2178	20.0	-22	True	AATAAA	-15
PB.6982.13	chr2	-	2589	10	full-splice_match	LANCL1	ENST00000431941.6	1270	10	17	-1336	-1	964	multi-exon	FALSE	canonical	1	34456	junction_9	157186.7963454098	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	54	1253	55.0	-30	True	NA	NA
PB.12229.4	chrX	-	3504	9	novel_not_in_catalog	KLHL13	novel	3256	7	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	2426	junction_8	39099.90502685876	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	491	2410	20.0	-17	True	AATAAA	-14
PB.12229.5	chrX	-	3388	8	novel_not_in_catalog	KLHL13	novel	3256	7	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	364	junction_6	39044.24167792329	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	480	2294	20.0	-8	True	AATAAA	-14
PB.10054.6	chr6	+	5524	21	novel_in_catalog	FAM135A	novel	529	5	NA	NA	-9	-8	intron_retention	FALSE	canonical	1	1859	junction_2	37718.71936118059	NA	0	NA	TRUE	NA	NA	NA	C	coding	1319	3960	324	4283	35.0	-3	True	AATAAA	-22
PB.10054.7	chr6	+	5130	23	novel_in_catalog	FAM135A	novel	529	5	NA	NA	-5	-647	intron_retention	FALSE	canonical	1	26385	junction_15	28791.5245873871	NA	0	NA	TRUE	NA	NA	NA	C	coding	1541	4626	414	5039	40.0	1	True	ATTAAA	-22
PB.10054.4	chr6	+	2154	10	novel_in_catalog	FAM135A	novel	529	5	NA	NA	-15	-21999	combination_of_known_junctions	FALSE	canonical	1	3945	junction_3	55093.23990392207	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	525	1412	40.0	-9	True	AATAAA	-17
PB.10054.5	chr6	+	5628	22	full-splice_match	FAM135A	ENST00000361499.7	5042	22	-73	-513	-9	1	multi-exon	FALSE	canonical	1	31982	junction_10	28558.750473104283	NA	0	NA	TRUE	NA	NA	NA	C	coding	1319	3960	418	4377	20.0	-3	True	AATAAA	-32
PB.10054.2	chr6	+	5362	23	novel_in_catalog	FAM135A	novel	529	5	NA	NA	24	113	intron_retention	FALSE	canonical	1	74506	junction_1	22920.489608708027	NA	1	NA	TRUE	NA	NA	NA	C	coding	1345	4038	474	4511	40.0	-59	True	ATTAAA	-15
PB.10054.3	chr6	+	3977	22	novel_in_catalog	FAM135A	novel	529	5	NA	NA	42	-1	no_combination_of_known_junctions	FALSE	canonical	1	483	junction_15	33311.652607491225	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	456	1817	15.0	-41	True	AATAAA	-33
PB.10054.1	chr6	+	5778	23	novel_in_catalog	FAM135A	novel	529	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	74506	junction_1	22920.489608708027	NA	0	NA	TRUE	NA	NA	NA	C	coding	1345	4038	492	4529	25.0	-77	True	AATAAA	-30
PB.68.13	chr1	-	2122	4	incomplete-splice_match	ENO1	ENST00000645609.1	1819	10	388	5590	-12	-655	3prime_fragment	FALSE	canonical	1	5131498	junction_2	3760739.7564646774	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	553	False	NA	NA
PB.8827.12	chr4	-	4931	10	novel_not_in_catalog	G3BP2	novel	4217	12	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	3091	junction_7	504071.5816502971	NA	5	NA	TRUE	NA	NA	NA	C	coding	320	963	1322	2284	30.0	-2	True	AATAAA	-22
PB.68.11	chr1	-	4646	3	full-splice_match	ENO1	ENST00000492343.2	1247	3	-26	-3373	2	-390	multi-exon	FALSE	canonical	1	5131498	junction_1	4245589.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	108	327	303	629	95.0	539	False	NA	NA
PB.8825.3	chr4	+	2289	5	full-splice_match	THAP6	ENST00000311638.7	3549	5	-10	1270	-10	-1270	multi-exon	FALSE	canonical	1	65512	junction_4	17934.257957886075	NA	2	NA	TRUE	NA	NA	NA	C	coding	222	669	79	747	60.0	-10	True	AGTAAA	-10
PB.2552.1	chr12	-	1826	8	full-splice_match	ZCRB1	ENST00000266529.7	1827	8	-8	9	5	-9	multi-exon	FALSE	canonical	1	361009	junction_7	117879.78199463231	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	193	846	30.0	-20	True	ATTAAA	-18
PB.10956.8	chr7	-	2869	22	full-splice_match	ESYT2	ENST00000251527.9	5960	22	484	2607	328	9	multi-exon	FALSE	canonical	1	303442	junction_21	190744.8585227085	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	111	2264	45.0	387	False	AATAAA	-26
PB.2552.2	chr12	-	1148	8	full-splice_match	ZCRB1	ENST00000266529.7	1827	8	-12	691	1	162	multi-exon	FALSE	canonical	1	361009	junction_7	117879.78199463231	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	197	850	25.0	-24	True	AATAAA	-24
PB.10956.5	chr7	-	5472	22	full-splice_match	ESYT2	ENST00000251527.9	5960	22	485	3	329	-3	multi-exon	FALSE	canonical	1	303442	junction_21	190744.8585227085	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	110	2263	10.0	388	False	AATAAA	-17
PB.5508.20	chr18	-	3972	2	incomplete-splice_match	BCL2	ENST00000333681.4	3209	3	-282	188841	60	-2074	3prime_fragment	FALSE	canonical	1	122770	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	1182	1799	60.0	-14	True	AAAACA	-14
PB.10956.3	chr7	-	5600	22	novel_not_in_catalog	ESYT2	novel	5960	22	NA	NA	8893	-3	any annotated donor/acceptor	FALSE	canonical	1	14542	junction_21	226574.68735674614	NA	4	NA	TRUE	NA	NA	NA	C	coding	717	2154	238	2391	10.0	1	True	AATAAA	-17
PB.10956.2	chr7	-	3683	6	novel_not_in_catalog	ESYT2	novel	5960	22	NA	NA	4205	0	any annotated donor/acceptor	FALSE	canonical	1	26005	junction_5	368397.7940273801	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	64	False	AATAAA	-20
PB.7047.7	chr2	+	3704	9	full-splice_match	RHBDD1	ENST00000392062.6	5151	9	100	1347	-1	-1347	multi-exon	FALSE	canonical	1	5774	junction_1	78934.66223719463	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	425	1372	20.0	1	True	AATAAA	-29
PB.8220.16	chr3	-	2091	2	incomplete-splice_match	TMF1	ENST00000488010.5	3399	16	-75	23816	-26	-3101	3prime_fragment	FALSE	canonical	1	257124	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	280	1656	15.0	-1	True	ATTAAA	-18
PB.8220.15	chr3	-	1839	4	incomplete-splice_match	TMF1	ENST00000488010.5	3399	16	-63	20679	-14	36	3prime_fragment	FALSE	canonical	1	257124	junction_3	11853.132197393601	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1572	268	1839	55.0	11	False	AAGAAA	-34
PB.7643.4	chr22	-	2149	2	full-splice_match	ZNF280A	ENST00000302097.3	2148	2	-4	3	-4	-3	multi-exon	FALSE	canonical	1	17611	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	258	1886	20.0	-5	False	NA	NA
PB.8220.13	chr3	-	1989	6	incomplete-splice_match	TMF1	ENST00000488010.5	3399	16	-42	16558	1	4157	3prime_fragment	FALSE	canonical	1	257124	junction_5	41801.23511380974	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1743	247	1989	65.0	0	True	AAGAAA	-10
PB.10852.3	chr7	-	6518	4	incomplete-splice_match	CHCHD3	ENST00000448878.6	1038	9	-56	183778	0	3744	3prime_fragment	FALSE	canonical	1	74671	junction_2	111672.46214712023	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	152	589	80.0	-2	True	NA	NA
PB.8220.11	chr3	-	3002	13	incomplete-splice_match	TMF1	ENST00000398559.6	6849	17	-78	8123	-42	-3151	3prime_fragment	FALSE	canonical	1	257124	junction_12	45502.635702048436	NA	1	NA	TRUE	NA	NA	NA	C	coding	902	2706	296	3001	60.0	-17	True	AATGAA	-6
PB.8220.10	chr3	-	3615	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	-15	3249	15	1	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	1	NA	TRUE	NA	NA	NA	C	coding	1093	3282	233	3514	40.0	14	True	AATAAA	-26
PB.11681.1	chr9	-	3241	13	full-splice_match	TBC1D2	ENST00000465784.6	3349	13	74	34	-14	-4	multi-exon	FALSE	canonical	1	113844	junction_12	38029.84837625353	NA	0	NA	TRUE	NA	NA	NA	A	coding	928	2787	107	2893	30.0	1	True	TATAAA	-23
PB.10067.26	chr6	+	4443	23	full-splice_match	SENP6	ENST00000370010.6	4644	23	364	-163	-54	163	multi-exon	FALSE	canonical	1	103972	junction_5	128961.80948355497	NA	4	NA	TRUE	NA	NA	NA	C	coding	1105	3318	653	3970	35.0	-7	True	ATTAAA	-15
PB.7643.2	chr22	-	2502	2	full-splice_match	ZNF280A	ENST00000302097.3	2148	2	0	-354	0	354	multi-exon	FALSE	canonical	1	17611	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	254	1882	15.0	-1	True	NA	NA
PB.10675.17	chr7	-	5763	6	novel_not_in_catalog	SAMD9L	novel	7134	5	NA	NA	-11	128	intron_retention	FALSE	canonical	1	4680	junction_3	54937.25633338454	NA	6	NA	TRUE	NA	NA	NA	C	coding	1584	4755	697	5451	25.0	-12	True	AATAAA	-16
PB.10675.16	chr7	-	5967	6	full-splice_match	SAMD9L	ENST00000437805.5	5757	6	-82	-128	-58	128	multi-exon	FALSE	canonical	1	37328	junction_3	42014.129164365644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1584	4755	901	5655	25.0	-59	False	AATAAA	-16
PB.10675.15	chr7	-	6031	4	novel_in_catalog	SAMD9L	novel	7134	5	NA	NA	-10	128	intron_retention	FALSE	canonical	1	20433	junction_3	57933.71687444962	NA	0	NA	TRUE	NA	NA	NA	C	coding	1584	4755	965	5719	25.0	-11	True	AATAAA	-16
PB.10675.14	chr7	-	5973	6	novel_not_in_catalog	SAMD9L	novel	7134	5	NA	NA	-16	128	intron_retention	FALSE	canonical	1	4680	junction_3	51553.415398012185	NA	5	NA	TRUE	NA	NA	NA	C	coding	1584	4755	907	5661	25.0	-17	True	AATAAA	-16
PB.10675.13	chr7	-	6090	5	full-splice_match	SAMD9L	ENST00000446033.1	1198	5	-34	-4858	-10	128	multi-exon	FALSE	canonical	1	39118	junction_3	45050.83562765512	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4755	1024	5778	25.0	-11	True	AATAAA	-16
PB.7643.1	chr22	-	2716	2	full-splice_match	ZNF280A	ENST00000302097.3	2148	2	-56	-512	-56	512	multi-exon	FALSE	canonical	1	17611	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	542	1629	310	1938	30.0	-57	False	NA	NA
PB.10675.11	chr7	-	5746	6	full-splice_match	SAMD9L	ENST00000411955.5	5831	6	-56	141	-41	129	multi-exon	FALSE	canonical	1	37328	junction_3	47046.002185095385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1584	4755	679	5433	20.0	-42	False	AATAAA	-17
PB.11733.2	chr9	-	4241	29	novel_not_in_catalog	FKBP15	novel	8807	28	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	86165.79415144227	NA	1	NA	TRUE	NA	NA	NA	C	coding	1219	3660	66	3725	40.0	-13	True	AATAAA	-30
PB.7720.8	chr22	-	2593	8	novel_in_catalog	PISD	novel	2669	8	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	1	42191	junction_7	198227.285516049	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	372	1496	70.0	-15	True	NA	NA
PB.10675.19	chr7	-	5656	5	full-splice_match	SAMD9L	ENST00000446959.5	763	5	-35	-4858	-11	128	multi-exon	FALSE	canonical	1	20433	junction_4	57021.064192870865	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4755	590	5344	25.0	-12	True	AATAAA	-16
PB.10675.18	chr7	-	5686	6	novel_not_in_catalog	SAMD9L	novel	7134	5	NA	NA	1	128	intron_retention	FALSE	canonical	1	2012	junction_3	55668.161824870775	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4755	620	5374	25.0	1	True	AATAAA	-16
PB.3707.7	chr14	+	2047	2	full-splice_match	MTA1	ENST00000481635.1	700	2	-902	-445	-410	-44	multi-exon	FALSE	canonical	1	1034205	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	1073	1579	85.0	-9898	False	NA	NA
PB.10435.1	chr7	+	772	4	full-splice_match	MALSU1	ENST00000466681.1	3044	4	115	2157	-24	-3	multi-exon	FALSE	canonical	1	711288	junction_1	86550.69343967666	NA	0	NA	TRUE	NA	NA	NA	A	coding	234	705	39	743	25.0	-24	True	AATAAA	-29
PB.3707.4	chr14	+	2377	17	incomplete-splice_match	MTA1	ENST00000405646.5	2709	20	30118	46	816	-44	5prime_fragment	FALSE	canonical	1	123953	junction_14	250378.85883646406	NA	3	NA	TRUE	NA	NA	NA	C	coding	629	1890	20	1909	85.0	-207	False	NA	NA
PB.6691.14	chr2	-	2083	2	full-splice_match	ANAPC1	ENST00000467878.1	580	2	-12	-1491	-12	1491	multi-exon	FALSE	canonical	1	214059	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-1	True	AATAAA	-23
PB.2177.6	chr11	+	5285	20	novel_in_catalog	EMSY	novel	2415	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	67338	junction_4	30191.06612936517	NA	0	NA	TRUE	NA	NA	NA	B	coding	1096	3291	143	3433	85.0	1	True	GATAAA	-25
PB.2177.4	chr11	+	4349	22	novel_in_catalog	EMSY	novel	2415	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	10395	junction_6	42800.68022172284	NA	0	NA	TRUE	NA	NA	NA	B	coding	1336	4011	143	4153	80.0	1	True	GATAAA	-24
PB.2177.5	chr11	+	4200	21	novel_in_catalog	EMSY	novel	2415	10	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	24119	junction_4	40762.39977246188	NA	0	NA	TRUE	NA	NA	NA	B	coding	1286	3861	143	4003	85.0	1	True	GATAAA	-25
PB.2177.2	chr11	+	4166	20	novel_in_catalog	EMSY	novel	2415	10	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	45595	junction_5	33445.52919884183	NA	2	NA	TRUE	NA	NA	NA	B	coding	1272	3819	151	3969	85.0	-7	True	GATAAA	-25
PB.2177.3	chr11	+	3101	18	novel_in_catalog	EMSY	novel	2415	10	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	3502	junction_17	41472.48015834632	NA	0	NA	TRUE	NA	NA	NA	B	coding	917	2754	151	2904	85.0	-7	True	GATAAA	-25
PB.2177.1	chr11	+	4324	21	novel_in_catalog	EMSY	novel	2415	10	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	1	67338	junction_4	29908.825851243306	NA	0	NA	TRUE	NA	NA	NA	B	coding	1323	3972	156	4127	85.0	-12	True	GATAAA	-25
PB.8407.4	chr3	+	2949	5	novel_in_catalog	CDV3	novel	3307	5	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	1	14691	junction_1	599382.0894364879	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	266	736	20.0	-275	False	AATAAA	-14
PB.8407.5	chr3	+	3064	5	novel_in_catalog	CDV3	novel	3307	5	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	8480	junction_1	601231.6788449254	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	381	851	20.0	-240	False	AATAAA	-14
PB.8407.6	chr3	+	3630	5	novel_not_in_catalog	CDV3	novel	3307	5	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	2404	junction_1	542357.8851104684	NA	2	NA	TRUE	NA	NA	NA	C	coding	111	336	209	544	25.0	-202	False	AATAAA	-15
PB.8407.7	chr3	+	2496	5	novel_in_catalog	CDV3	novel	3307	5	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	1	8480	junction_1	616101.6628118284	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	269	595	25.0	-128	False	AATAAA	-15
PB.7047.1	chr2	+	3676	8	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	34	-1359	combination_of_known_junctions	FALSE	canonical	1	802	junction_1	75815.50420754911	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	409	1356	35.0	-445	False	AATAAA	-17
PB.8407.1	chr3	+	2789	5	full-splice_match	CDV3	ENST00000264993.7	3307	5	517	1	167	0	multi-exon	FALSE	canonical	1	258080	junction_4	446428.69494298863	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	105	575	25.0	0	True	AATAAA	-15
PB.8407.2	chr3	+	3513	5	full-splice_match	CDV3	ENST00000431519.6	955	5	284	-2842	-174	0	multi-exon	FALSE	canonical	1	741441	junction_1	289749.47160122223	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	92	427	25.0	-409	False	AATAAA	-15
PB.8407.3	chr3	+	3709	5	novel_in_catalog	CDV3	novel	3307	5	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	1	14691	junction_1	572583.5411363022	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	294	623	25.0	-303	False	AATAAA	-15
PB.3892.26	chr15	+	3844	12	novel_in_catalog	TCF12	novel	4786	21	NA	NA	-1	3	no_combination_of_known_junctions	FALSE	canonical	1	1386	junction_11	184968.0090704988	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	94	1512	35.0	-1	True	AATAAA	-23
PB.3892.27	chr15	+	3735	11	incomplete-splice_match	TCF12	ENST00000343827.7	3956	13	12823	-8	12823	0	5prime_fragment	FALSE	canonical	1	365153	junction_5	94048.70698079797	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	47	1366	40.0	7036	False	AATAAA	-26
PB.3892.24	chr15	+	5342	13	full-splice_match	TCF12	ENST00000343827.7	3956	13	-41	-1345	-5	-2	multi-exon	FALSE	canonical	1	85920	junction_1	140545.59289920438	NA	2	NA	TRUE	NA	NA	NA	C	coding	512	1539	98	1636	25.0	-5	True	AATAAA	-14
PB.3892.25	chr15	+	4002	13	full-splice_match	TCF12	ENST00000343827.7	3956	13	-38	-8	-2	0	multi-exon	FALSE	canonical	1	85920	junction_1	140545.59289920438	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	95	1633	40.0	-2	True	AATAAA	-26
PB.3892.22	chr15	+	3893	12	full-splice_match	TCF12	ENST00000537840.5	1598	12	-38	-2257	-33	0	multi-exon	FALSE	canonical	1	12564	junction_2	183973.20007364888	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	184	1524	40.0	0	True	AATAAA	-26
PB.3892.23	chr15	+	4093	14	novel_in_catalog	TCF12	novel	4786	21	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	52954	junction_11	209307.39422286747	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	117	1724	40.0	9	True	AATAAA	-26
PB.3892.20	chr15	+	4128	16	novel_not_in_catalog	TCF12	novel	4786	21	NA	NA	-6540	-1	any annotated donor/acceptor	FALSE	canonical	1	200	junction_1	150245.87306805543	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	369	1760	35.0	-6524	False	AATAAA	-25
PB.9373.4	chr5	-	1478	7	full-splice_match	NUDT12	ENST00000230792.6	3492	7	12	2002	8	-349	multi-exon	FALSE	canonical	1	100465	junction_6	17433.384732237806	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	86	1474	40.0	7	True	AATAAA	-18
PB.8827.15	chr4	-	4931	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-664	-5	combination_of_known_junctions	FALSE	canonical	1	84195	junction_10	434606.21458837885	NA	3	NA	TRUE	NA	NA	NA	C	coding	449	1350	939	2288	25.0	-817	False	AATAAA	-18
PB.6312.7	chr2	-	1407	16	incomplete-splice_match	NOL10	ENST00000381685.9	2589	21	-8	31160	0	19208	3prime_fragment	FALSE	canonical	1	174634	junction_12	52545.100074338254	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1293	115	1407	55.0	-1	True	GATAAA	-10
PB.7860.4	chr22	+	2333	9	incomplete-splice_match	ATXN10	ENST00000252934.9	3329	12	240	103634	-25	873	3prime_fragment	FALSE	canonical	1	496116	junction_1	339623.4007669377	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	26	1252	80.0	2	True	NA	NA
PB.7860.5	chr22	+	4680	10	novel_not_in_catalog	ATXN10	novel	3135	11	NA	NA	45	1722	any annotated donor/acceptor	FALSE	canonical	1	723	junction_9	510156.9850857457	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	221	1609	20.0	10	True	AATAAA	-13
PB.7860.6	chr22	+	1799	12	full-splice_match	ATXN10	ENST00000252934.9	3329	12	58	1472	58	38	multi-exon	FALSE	canonical	1	496116	junction_1	348534.7377024596	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	208	1635	15.0	23	True	NA	NA
PB.7860.7	chr22	+	1763	12	full-splice_match	ATXN10	ENST00000252934.9	3329	12	247	1319	-18	191	multi-exon	FALSE	canonical	1	496116	junction_1	348534.7377024596	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	19	1446	20.0	9	True	AATAAA	-36
PB.7860.1	chr22	+	2732	12	full-splice_match	ATXN10	ENST00000252934.9	3329	12	239	358	-26	-355	multi-exon	FALSE	canonical	1	496116	junction_1	348534.7377024596	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	27	1454	30.0	1	True	AGTAAA	-26
PB.7860.2	chr22	+	2659	10	incomplete-splice_match	ATXN10	ENST00000252934.9	3329	12	35	37093	35	-3580	3prime_fragment	FALSE	canonical	1	496116	junction_1	348844.60860356974	NA	3	NA	TRUE	NA	NA	NA	C	coding	453	1362	231	1592	80.0	0	True	ATTAAA	-27
PB.7860.3	chr22	+	3094	12	full-splice_match	ATXN10	ENST00000252934.9	3329	12	236	-1	-29	1	multi-exon	FALSE	canonical	1	496116	junction_1	348534.7377024596	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	30	1457	25.0	-2	True	AATAAA	-27
PB.6633.1	chr2	-	7175	45	full-splice_match	SNRNP200	ENST00000323853.9	7165	45	-11	1	-11	-1	multi-exon	TRUE	canonical	1	301678	junction_31	335614.76087622496	NA	2	NA	TRUE	NA	NA	NA	C	coding	2136	6411	90	6500	25.0	19	True	AATAAA	-18
PB.7860.8	chr22	+	4232	10	novel_not_in_catalog	ATXN10	novel	3135	11	NA	NA	80	1309	any annotated donor/acceptor	FALSE	canonical	1	723	junction_9	510156.9850857457	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	186	1574	20.0	-158	False	ATTAAA	-19
PB.7860.9	chr22	+	3032	12	novel_not_in_catalog	ATXN10	novel	3135	11	NA	NA	-25	637	any annotated donor/acceptor	FALSE	canonical	1	2074	junction_10	595742.2902414674	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	26	1387	25.0	2	True	AATAAA	-22
PB.8417.3	chr3	-	3340	2	full-splice_match	MSL2	ENST00000481989.1	576	2	-11	-2753	-11	-521	multi-exon	FALSE	canonical	1	2629	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	125	1636	10.0	-1	True	AGTAAA	-18
PB.8417.2	chr3	-	3486	2	full-splice_match	MSL2	ENST00000473093.1	543	2	-12	-2931	-12	-521	multi-exon	FALSE	canonical	1	4452	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	503	1512	271	1782	10.0	-13	True	AGTAAA	-18
PB.8417.1	chr3	-	4643	2	full-splice_match	MSL2	ENST00000309993.2	4692	2	47	2	47	-2	multi-exon	FALSE	canonical	1	318457	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	577	1734	687	2420	35.0	44	True	AATAAA	-13
PB.6298.5	chr2	-	7220	29	novel_in_catalog	KIDINS220	novel	8735	30	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	144075	junction_28	74388.58198499633	NA	0	NA	TRUE	NA	NA	NA	B	coding	1752	5259	172	5430	25.0	-2	True	AATAAA	-13
PB.9373.3	chr5	-	3448	7	full-splice_match	NUDT12	ENST00000507423.1	1781	7	-16	-1651	-12	-2	multi-exon	FALSE	canonical	1	14255	junction_5	43496.438961521126	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	110	1444	5.0	-17	True	ATTAAA	-12
PB.8417.4	chr3	-	4219	2	full-splice_match	MSL2	ENST00000309993.2	4692	2	-56	529	-56	-529	multi-exon	FALSE	canonical	1	318457	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	790	2523	10.0	1349	False	AGTAAA	-10
PB.9373.2	chr5	-	3501	7	full-splice_match	NUDT12	ENST00000230792.6	3492	7	-9	0	-9	0	multi-exon	FALSE	canonical	1	100465	junction_6	17433.384732237806	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	107	1495	0.0	-14	True	ATTAAA	-14
PB.490.22	chr1	+	4212	1	novel_in_catalog	IFI44L	novel	554	3	NA	NA	1	-3526	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	22	True	NA	NA
PB.3612.1	chr14	-	6283	13	novel_in_catalog	NRDE2	novel	14208	14	NA	NA	-23	1818	intron_retention	FALSE	canonical	1	60276	junction_7	17948.573385547636	NA	3	NA	TRUE	NA	NA	NA	C	coding	1175	3528	89	3616	95.0	10	True	NA	NA
PB.3612.3	chr14	-	3824	14	full-splice_match	NRDE2	ENST00000354366.7	14208	14	184	10200	16	-2	multi-exon	FALSE	canonical	1	60276	junction_8	18031.065131137253	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	50	3544	10.0	-13	True	ATTAAA	-19
PB.3612.2	chr14	-	5662	14	full-splice_match	NRDE2	ENST00000354366.7	14208	14	165	8381	-3	1817	multi-exon	FALSE	canonical	1	60276	junction_8	18031.065131137253	NA	3	NA	TRUE	NA	NA	NA	C	coding	1164	3495	69	3563	90.0	107	False	NA	NA
PB.4020.1	chr15	+	1425	3	full-splice_match	TMED3	ENST00000299705.9	1475	3	47	3	-36	-3	multi-exon	FALSE	canonical	1	1116953	junction_1	189103.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	142	795	15.0	-3	True	AATAAA	-22
PB.4020.3	chr15	+	2507	3	full-splice_match	TMED3	ENST00000299705.9	1475	3	57	-1089	-26	1089	multi-exon	FALSE	canonical	1	1116953	junction_1	189103.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	132	785	30.0	7	True	NA	NA
PB.4020.2	chr15	+	2900	4	novel_in_catalog	TMED3	novel	1475	3	NA	NA	-32	3	combination_of_known_junctions	FALSE	canonical	1	5937	junction_3	516194.14866372384	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	138	578	15.0	1	True	AATAAA	-18
PB.4020.4	chr15	+	2003	3	full-splice_match	TMED3	ENST00000299705.9	1475	3	66	-594	-17	594	multi-exon	FALSE	canonical	1	1116953	junction_1	189103.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	123	776	15.0	16	True	GATAAA	-16
PB.3619.7	chr14	-	3647	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	111	-9	combination_of_known_junctions	FALSE	canonical	1	69301	junction_6	214487.54937847145	NA	1	1	TRUE	NA	NA	NA	B	coding	503	1512	1	1512	40.0	1017	False	AATAAA	-16
PB.8784.8	chr4	+	2920	1	genic	TMEM165	novel	NA	NA	NA	NA	-3	1468	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-3	True	AATAAA	-11
PB.8784.9	chr4	+	1860	6	novel_in_catalog	TMEM165	novel	828	3	NA	NA	0	-430	combination_of_known_junctions	FALSE	canonical	1	24080	junction_5	463910.02083740337	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	234	1199	45.0	0	True	AATAAA	-10
PB.8784.4	chr4	+	1568	1	genic	TMEM165	novel	NA	NA	NA	NA	-34	85	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.8784.5	chr4	+	1903	7	novel_not_in_catalog	TMEM165	novel	828	3	NA	NA	-33	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	465158.62283012905	NA	2	1	TRUE	NA	NA	NA	C	coding	205	618	567	1184	5.0	1	True	AATAAA	-43
PB.8784.6	chr4	+	2987	6	novel_not_in_catalog	TMEM165	novel	828	3	NA	NA	-28	1	intron_retention	FALSE	canonical	1	17197	junction_2	503208.68949969456	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	262	747	0.0	6	True	AATAAA	-45
PB.8784.7	chr4	+	2683	5	incomplete-splice_match	TMEM165	ENST00000381334.9	1928	6	-20	-3	-20	3	intron_retention	FALSE	canonical	1	427291	junction_1	323370.1752839731	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	254	1162	0.0	14	True	AATAAA	-17
PB.8784.1	chr4	+	3201	6	novel_not_in_catalog	TMEM165	novel	828	3	NA	NA	-62	2	intron_retention	FALSE	canonical	1	17197	junction_2	552765.6608490075	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	296	781	0.0	-7867	False	AATAAA	-16
PB.8784.2	chr4	+	2106	7	novel_not_in_catalog	TMEM165	novel	828	3	NA	NA	-59	3	any annotated donor/acceptor	FALSE	canonical	1	17197	junction_2	546015.7332989591	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	293	778	0.0	-7864	False	AATAAA	-17
PB.8784.3	chr4	+	2695	6	novel_not_in_catalog	TMEM165	novel	828	3	NA	NA	-38	2	intron_retention	FALSE	canonical	1	672	junction_2	480684.123602434	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-4	True	AATAAA	-16
PB.1189.4	chr1	+	5364	9	novel_in_catalog	URB2	novel	5613	10	NA	NA	-39	-177	no_combination_of_known_junctions	FALSE	canonical	1	12324	junction_5	49157.28530950422	NA	1	NA	TRUE	NA	NA	NA	C	coding	1487	4464	176	4639	75.0	-52	True	NA	NA
PB.1189.5	chr1	+	5454	10	full-splice_match	URB2	ENST00000258243.6	5613	10	15	144	15	-144	multi-exon	FALSE	canonical	1	57010	junction_1	34922.86165391899	NA	0	NA	TRUE	NA	NA	NA	C	coding	1524	4575	122	4696	25.0	2	True	NA	NA
PB.1189.6	chr1	+	6592	10	full-splice_match	URB2	ENST00000258243.6	5613	10	-36	-943	-36	943	multi-exon	FALSE	canonical	1	57010	junction_1	34922.86165391899	NA	2	NA	TRUE	NA	NA	NA	C	coding	1524	4575	173	4747	25.0	-49	True	AGTAAA	-19
PB.1189.7	chr1	+	5649	10	full-splice_match	URB2	ENST00000258243.6	5613	10	-36	0	-36	0	multi-exon	FALSE	canonical	1	57010	junction_1	34922.86165391899	NA	0	NA	TRUE	NA	NA	NA	C	coding	1524	4575	173	4747	20.0	-49	True	NA	NA
PB.6633.3	chr2	-	6783	45	full-splice_match	SNRNP200	ENST00000323853.9	7165	45	-14	396	-14	-1	multi-exon	FALSE	canonical	1	301678	junction_31	335614.76087622496	NA	0	NA	TRUE	NA	NA	NA	C	coding	2136	6411	93	6503	15.0	16	True	AATAAA	-17
PB.7047.2	chr2	+	3423	7	full-splice_match	RHBDD1	ENST00000341329.7	4883	7	91	1369	-7	-1355	multi-exon	FALSE	canonical	1	47157	junction_1	56981.20252158211	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	152	1099	35.0	-27	True	AATAAA	-21
PB.1189.3	chr1	+	4976	10	full-splice_match	URB2	ENST00000258243.6	5613	10	-40	677	-40	396	multi-exon	FALSE	canonical	1	57010	junction_1	34922.86165391899	NA	0	NA	TRUE	NA	NA	NA	C	coding	1524	4575	177	4751	35.0	-53	True	AATACA	-36
PB.10959.1	chr8	+	4829	1	full-splice_match	AC004908.2	ENST00000609090.1	574	1	-751	-3504	-751	3504	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	27	84	430	513	10.0	-88	False	AATAAA	-17
PB.1189.8	chr1	+	5173	10	full-splice_match	URB2	ENST00000258243.6	5613	10	-33	473	-33	-473	multi-exon	FALSE	canonical	1	57010	junction_1	34922.86165391899	NA	3	NA	TRUE	NA	NA	NA	C	coding	1524	4575	170	4744	35.0	-46	True	AATATA	-24
PB.1189.9	chr1	+	4910	9	novel_in_catalog	URB2	novel	5613	10	NA	NA	-32	449	no_combination_of_known_junctions	FALSE	canonical	1	12324	junction_5	49157.28530950422	NA	0	NA	TRUE	NA	NA	NA	C	coding	1487	4464	169	4632	5.0	-45	True	AATAGA	-20
PB.1964.35	chr11	+	3000	1	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-3543	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	4	True	NA	NA
PB.12201.1	chrX	+	2747	6	novel_in_catalog	PLP1	novel	786	5	NA	NA	-22	1	no_combination_of_known_junctions	FALSE	canonical	1	170	junction_3	944019.8244843378	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	169	600	20.0	-9875	False	AATAAA	-21
PB.12201.2	chrX	+	4086	6	novel_in_catalog	PLP1	novel	786	5	NA	NA	-16	1	intron_retention	FALSE	canonical	1	1852946	junction_1	312109.57545195566	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	163	645	20.0	-6	True	AATAAA	-21
PB.12201.3	chrX	+	2517	7	full-splice_match	PLP1	ENST00000621218.4	3001	7	-16	500	-16	-497	multi-exon	FALSE	canonical	1	1852946	junction_1	329384.2773632932	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	163	996	70.0	-6	True	NA	NA
PB.12201.4	chrX	+	2103	7	full-splice_match	PLP1	ENST00000619236.1	2896	7	-16	809	-16	-806	multi-exon	FALSE	canonical	1	325069	junction_3	794610.5522216003	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	163	891	25.0	-6	True	ATTAAA	-18
PB.12201.5	chrX	+	2979	7	full-splice_match	PLP1	ENST00000621218.4	3001	7	20	2	-4	1	multi-exon	FALSE	canonical	1	1852946	junction_1	329384.2773632932	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	127	960	20.0	-4	True	AATAAA	-21
PB.12201.6	chrX	+	2832	7	full-splice_match	PLP1	ENST00000619236.1	2896	7	24	40	0	-37	multi-exon	FALSE	canonical	1	325069	junction_3	794610.5522216003	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	123	851	75.0	0	True	CATAAA	-42
PB.12201.7	chrX	+	1394	7	full-splice_match	PLP1	ENST00000619236.1	2896	7	-8	1510	-8	320	multi-exon	FALSE	canonical	1	325069	junction_3	794610.5522216003	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	155	883	50.0	2	True	AAAAAG	-9
PB.12201.8	chrX	+	2762	7	full-splice_match	PLP1	ENST00000621218.4	3001	7	-3	242	-3	-239	multi-exon	FALSE	canonical	1	1852946	junction_1	329384.2773632932	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	150	983	10.0	7	True	GATAAA	-20
PB.12201.9	chrX	+	3818	6	novel_in_catalog	PLP1	novel	786	5	NA	NA	12	-239	intron_retention	FALSE	canonical	1	1852946	junction_1	312109.57545195566	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	135	617	10.0	-9841	False	GATAAA	-20
PB.1964.39	chr11	+	2286	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	42	1003	0	-309	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	112	1005	25.0	4	True	ATTAAA	-17
PB.1964.38	chr11	+	2661	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	1	15613	junction_2	490707.4622917156	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	158	1060	20.0	4	True	AATAAA	-37
PB.10980.1	chr8	-	1371	7	full-splice_match	PINX1	ENST00000314787.7	1545	7	-23	197	-15	-1	multi-exon	FALSE	canonical	1	140157	junction_1	30939.980384968287	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	144	1130	30.0	-32	True	AATAAA	-18
PB.7025.1	chr2	-	2733	17	full-splice_match	GLB1L	ENST00000392089.6	2574	17	15	-174	9	9	multi-exon	FALSE	canonical	1	8099	junction_16	22265.49790876009	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	294	2258	10.0	9276	False	ATTAAA	-28
PB.7025.3	chr2	-	2433	15	novel_in_catalog	GLB1L	novel	2745	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	8099	junction_14	25302.903340409015	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	274	1968	25.0	0	True	ATTAAA	-18
PB.7025.5	chr2	-	2549	17	full-splice_match	GLB1L	ENST00000295759.11	2745	17	19	177	-9	-12	multi-exon	FALSE	canonical	1	2580	junction_16	23117.053907691043	NA	2	1	TRUE	NA	NA	NA	C	coding	654	1965	296	2260	100.0	-10	True	NA	NA
PB.7025.4	chr2	-	3024	17	novel_in_catalog	GLB1L	novel	2745	17	NA	NA	-12	-4	intron_retention	FALSE	canonical	1	4145	junction_16	22870.876185323006	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	598	2562	30.0	9283	False	ATTAAA	-15
PB.2987.3	chr12	+	1145	7	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	0	-582	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	227395.54993184356	NA	6	NA	TRUE	NA	NA	NA	C	coding	152	459	277	735	5.0	-30	True	AATAAA	-21
PB.2987.2	chr12	+	1942	7	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	-3	212	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	227395.54993184356	NA	6	NA	TRUE	NA	NA	NA	C	coding	152	459	280	738	45.0	-33	True	NA	NA
PB.2987.1	chr12	+	2696	7	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	227395.54993184356	NA	5	NA	TRUE	NA	NA	NA	C	coding	152	459	253	711	25.0	-6	True	ATTAAA	-17
PB.2987.7	chr12	+	1957	8	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	7	-269	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	247320.07438985637	NA	3	NA	TRUE	NA	NA	NA	C	coding	219	660	247	906	60.0	0	True	AATAAA	-29
PB.2987.6	chr12	+	2850	2	full-splice_match	DENR	ENST00000537955.1	699	2	7	-2158	7	2158	multi-exon	FALSE	canonical	1	562204	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.2987.5	chr12	+	2815	3	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	5	-243	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	281102.0	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-22	True	ATTAAA	-18
PB.2987.4	chr12	+	2424	7	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	-6	-280	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	227395.54993184356	NA	3	NA	TRUE	NA	NA	NA	C	coding	152	459	260	718	60.0	-13	True	AATAAA	-18
PB.490.25	chr1	+	2010	10	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	1	415	any annotated donor/acceptor	FALSE	canonical	1	13228	junction_2	201350.2678193242	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	141	1436	90.0	22	True	NA	NA
PB.2987.8	chr12	+	2752	7	novel_not_in_catalog	DENR	novel	2769	8	NA	NA	12	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	227395.54993184356	NA	5	1	TRUE	NA	NA	NA	C	coding	152	459	312	770	30.0	5	True	ATTAAA	-14
PB.8202.1	chr3	+	1595	3	full-splice_match	KCTD6	ENST00000404589.7	1533	3	-97	35	-97	-10	multi-exon	FALSE	canonical	1	51650	junction_1	24996.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	237	714	197	910	80.0	-79	False	NA	NA
PB.996.3	chr1	+	3616	15	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-182	219622	-182	-6818	3prime_fragment	FALSE	canonical	1	26732	junction_1	3577.0268701243826	NA	1	NA	TRUE	NA	NA	NA	C	coding	801	2406	412	2817	50.0	-2	True	AATAAA	-25
PB.9823.1	chr6	-	2885	4	full-splice_match	ZSCAN31	ENST00000439158.5	3050	4	163	2	-35	1	multi-exon	FALSE	canonical	1	3049	junction_3	28464.143982678746	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	238	1458	20.0	531	False	AATAAA	-28
PB.4847.1	chr17	+	1473	6	full-splice_match	TMEM199	ENST00000292114.7	3148	6	55	1620	-6	608	multi-exon	FALSE	canonical	1	318335	junction_4	24227.346709039353	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	36	662	20.0	-9799	False	AATAAA	-17
PB.4847.2	chr17	+	1668	6	full-splice_match	TMEM199	ENST00000292114.7	3148	6	55	1425	-6	803	multi-exon	FALSE	canonical	1	318335	junction_4	24227.346709039353	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	36	662	15.0	-9799	False	CATAAA	-37
PB.4847.3	chr17	+	1901	6	full-splice_match	TMEM199	ENST00000292114.7	3148	6	63	1184	2	1044	multi-exon	FALSE	canonical	1	318335	junction_4	24227.346709039353	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	28	654	70.0	-3	True	NA	NA
PB.4847.4	chr17	+	2035	6	full-splice_match	TMEM199	ENST00000292114.7	3148	6	64	1049	-2	-1049	multi-exon	FALSE	canonical	1	318335	junction_4	24227.346709039353	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	27	653	60.0	-2	True	NA	NA
PB.4847.5	chr17	+	3081	6	full-splice_match	TMEM199	ENST00000292114.7	3148	6	66	1	0	-1	multi-exon	FALSE	canonical	1	318335	junction_4	24227.346709039353	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	25	651	15.0	0	True	ATTAAA	-15
PB.4847.6	chr17	+	2554	6	novel_not_in_catalog	TMEM199	novel	3148	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	14915	junction_5	139387.458684919	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	16	558	15.0	9	True	ATTAAA	-15
PB.4847.7	chr17	+	2813	4	novel_in_catalog	TMEM199	novel	3148	6	NA	NA	0	610	intron_retention	FALSE	canonical	1	318335	junction_2	19028.37902245544	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	1602	2000	20.0	10	True	AATAAA	-19
PB.8260.32	chr3	-	4205	16	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	6818	junction_7	216940.45041033725	NA	3	NA	TRUE	NA	NA	NA	C	coding	427	1284	367	1650	10.0	2	True	AATAAA	-11
PB.8260.35	chr3	-	3442	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	11	-599	no_combination_of_known_junctions	FALSE	canonical	1	15297	junction_14	224176.9295024989	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	353	2452	50.0	16	True	TATAAA	-10
PB.8260.37	chr3	-	3531	17	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-6	-865	any annotated donor/acceptor	FALSE	canonical	1	3910	junction_16	249482.46998335593	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	798	2807	15.0	-1	True	TATAAA	-21
PB.8260.36	chr3	-	3417	16	full-splice_match	DCBLD2	ENST00000326840.10	6122	16	-4	2709	-4	-867	multi-exon	FALSE	canonical	1	381028	junction_8	168364.61732627265	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	368	2695	15.0	1	True	TATAAA	-19
PB.4161.1	chr16	-	1336	4	full-splice_match	MSRB1	ENST00000361871.7	1423	4	61	26	28	-2	multi-exon	FALSE	canonical	1	389511	junction_1	117471.00419914506	NA	0	NA	TRUE	NA	NA	NA	A	coding	94	285	110	394	15.0	-1	True	AATGAA	-7
PB.8260.38	chr3	-	3455	16	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-4	-865	any annotated donor/acceptor	FALSE	canonical	1	12	junction_1	218651.23181165833	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	368	2233	15.0	1	True	TATAAA	-21
PB.3275.5	chr13	+	2236	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-19	-281	any annotated donor/acceptor	FALSE	canonical	1	35450	junction_1	195592.5421551836	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	94	1314	30.0	-51	True	ATTAAA	-21
PB.2758.11	chr12	+	1944	6	incomplete-splice_match	CNOT2	ENST00000552231.5	1545	10	439	6804	0	3	3prime_fragment	FALSE	canonical	1	359584	junction_1	76080.58224540608	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	144	716	10.0	0	True	ATTAAA	-18
PB.2758.10	chr12	+	1943	18	novel_in_catalog	CNOT2	novel	1545	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4510	junction_3	243132.94583173344	NA	19	2	TRUE	NA	NA	NA	C	coding	520	1560	383	1942	100.0	0	True	NA	NA
PB.2758.13	chr12	+	2508	15	incomplete-splice_match	CNOT2	ENST00000418359.7	3152	17	404	7839	1	528	internal_fragment	FALSE	canonical	1	359584	junction_1	130228.08801961619	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	143	1708	40.0	1	True	AATAAA	-11
PB.2758.12	chr12	+	4060	15	novel_in_catalog	CNOT2	novel	1545	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	359584	junction_1	127566.21430547192	NA	3	NA	TRUE	NA	NA	NA	C	coding	350	1050	3010	4059	100.0	1	True	NA	NA
PB.2758.15	chr12	+	2164	16	novel_in_catalog	CNOT2	novel	1545	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	6327	junction_1	182431.87442176873	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1620	544	2163	100.0	-12	True	NA	NA
PB.2758.14	chr12	+	2486	16	full-splice_match	CNOT2	ENST00000229195.7	3282	16	459	337	4	-337	multi-exon	FALSE	canonical	1	359584	junction_1	126009.29042408826	NA	2	1	TRUE	NA	NA	NA	C	coding	540	1623	124	1746	45.0	20	True	AATAAA	-22
PB.2758.17	chr12	+	1909	2	novel_not_in_catalog	CNOT2	novel	1545	10	NA	NA	3592	-21869	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	3508	False	ATTAAA	-31
PB.2758.16	chr12	+	2288	16	full-splice_match	CNOT2	ENST00000551043.5	2288	16	-1	1	-1	-1	multi-exon	FALSE	canonical	1	1389	junction_1	183397.69291395132	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1620	669	2288	95.0	-4	True	NA	NA
PB.9669.12	chr5	+	2837	8	full-splice_match	SQSTM1	ENST00000389805.8	2986	8	146	3	0	-3	multi-exon	FALSE	canonical	1	2631348	junction_1	1119419.842043372	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	33	1355	35.0	0	True	AATAAA	-19
PB.11724.11	chr9	+	2473	11	full-splice_match	HSDL2	ENST00000398805.7	3350	11	162	715	-5	-710	multi-exon	FALSE	canonical	1	344539	junction_4	84388.26144440942	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	66	1322	25.0	-9	True	AATAAA	-20
PB.490.27	chr1	+	1984	9	novel_in_catalog	IFI44L	novel	554	3	NA	NA	463	-415	no_combination_of_known_junctions	FALSE	canonical	1	13228	junction_1	156589.25534559356	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	51	1409	95.0	-4	True	NA	NA
PB.968.1	chr1	-	1577	8	full-splice_match	ACBD6	ENST00000367595.3	1670	8	92	1	92	-1	multi-exon	FALSE	canonical	1	506801	junction_7	93331.77548631854	NA	0	NA	TRUE	NA	NA	NA	A	coding	282	849	597	1445	30.0	-23	True	AATAAA	-21
PB.3896.22	chr15	-	3561	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	180	7690	-7	375	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	7	NA	TRUE	NA	NA	NA	C	coding	674	2025	487	2511	30.0	-11	True	AAGAAA	-41
PB.3896.23	chr15	-	3091	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	157	8183	-30	-118	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	288	2534	45.0	0	True	TATAAA	-19
PB.2997.8	chr12	-	2540	19	novel_not_in_catalog	SBNO1	novel	10981	31	NA	NA	-7	-24936	any annotated donor/acceptor	FALSE	canonical	1	8397	junction_18	132098.49184372168	NA	0	NA	TRUE	NA	NA	NA	B	coding	782	2346	195	2540	80.0	-14	True	NA	NA
PB.2997.9	chr12	-	2511	18	incomplete-splice_match	SBNO1	ENST00000267176.8	11121	32	-22	31732	-22	-24936	3prime_fragment	FALSE	canonical	1	84312	junction_17	108834.17131066369	NA	3	NA	TRUE	NA	NA	NA	B	coding	782	2346	166	2511	80.0	352	False	NA	NA
PB.3896.24	chr15	-	2891	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	156	8384	-31	11	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	289	2535	45.0	-1	True	AATAAA	-17
PB.8393.4	chr3	+	3596	27	novel_in_catalog	IFT122	novel	4414	31	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	27214	junction_3	44799.61119138656	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	114	3506	20.0	-29	True	AATAAA	-22
PB.2997.5	chr12	-	2615	19	novel_not_in_catalog	SBNO1	novel	10981	31	NA	NA	-3	-24935	any annotated donor/acceptor	FALSE	canonical	1	898	junction_17	136359.11245659608	NA	1	NA	TRUE	NA	NA	NA	B	coding	783	2349	266	2614	80.0	-10	True	NA	NA
PB.2997.6	chr12	-	2403	17	novel_in_catalog	SBNO1	novel	10981	31	NA	NA	-15	-24935	no_combination_of_known_junctions	FALSE	canonical	1	8527	junction_15	127182.71264219577	NA	0	NA	TRUE	NA	NA	NA	B	coding	748	2244	159	2402	80.0	359	False	NA	NA
PB.2997.7	chr12	-	2647	20	novel_not_in_catalog	SBNO1	novel	10981	31	NA	NA	5	-24936	any annotated donor/acceptor	FALSE	canonical	1	1856	junction_18	143692.78660779592	NA	1	NA	TRUE	NA	NA	NA	B	coding	782	2346	302	2647	80.0	-2	True	NA	NA
PB.2997.1	chr12	-	4127	21	incomplete-splice_match	SBNO1	ENST00000420886.6	10981	31	22628	5423	22628	1373	5prime_fragment	FALSE	canonical	1	234373	junction_9	75290.1452239767	NA	3	NA	TRUE	NA	NA	NA	B	coding	909	2730	22	2751	35.0	-7319	False	AATAAA	-14
PB.8393.2	chr3	+	3788	28	novel_in_catalog	IFT122	novel	4414	31	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	22348	junction_15	48320.254087163186	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	204	3698	20.0	-24	True	AATAAA	-22
PB.8393.3	chr3	+	3716	29	full-splice_match	IFT122	ENST00000347300.6	3841	29	123	2	4	0	multi-exon	FALSE	canonical	1	82988	junction_4	40465.944725463094	NA	0	NA	TRUE	NA	NA	NA	C	coding	1182	3549	84	3632	20.0	1	True	AATAAA	-16
PB.7811.2	chr22	+	3199	17	full-splice_match	L3MBTL2	ENST00000216237.9	3296	17	98	-1	1	1	multi-exon	FALSE	canonical	1	181400	junction_5	53542.68813351175	NA	1	1	TRUE	NA	NA	NA	C	coding	705	2118	61	2178	15.0	-9	True	ATTAAA	-18
PB.6860.1	chr2	-	4203	1	novel_in_catalog	LINC01116	novel	1407	3	NA	NA	-74	-3269	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	549	False	NA	NA
PB.7047.9	chr2	+	3124	9	full-splice_match	RHBDD1	ENST00000392062.6	5151	9	100	1927	-1	1373	multi-exon	FALSE	canonical	1	5774	junction_1	78934.66223719463	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	425	1372	20.0	1	True	ATTAAA	-12
PB.576.1	chr1	+	4108	3	novel_not_in_catalog	LINC01307	novel	474	5	NA	NA	21415	3285	any annotated donor/acceptor	FALSE	canonical	1	1415	junction_2	954.5	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-1723	False	AATAAA	-14
PB.576.2	chr1	+	4157	3	novel_not_in_catalog	LINC01307	novel	474	5	NA	NA	21431	3394	any annotated donor/acceptor	FALSE	canonical	1	1060	junction_2	1491.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-10	True	AATAAA	-16
PB.576.3	chr1	+	3883	3	novel_not_in_catalog	LINC01307	novel	474	5	NA	NA	21433	3285	any annotated donor/acceptor	FALSE	canonical	1	1783	junction_1	1380.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-8	True	AATAAA	-14
PB.9232.11	chr5	-	5832	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	-13	3238	-13	2633	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	1	NA	TRUE	NA	NA	NA	C	coding	918	2757	327	3083	15.0	47	False	ATTAAA	-19
PB.1090.13	chr1	+	3104	13	novel_in_catalog	CD46	novel	3371	14	NA	NA	0	-3	intron_retention	FALSE	canonical	1	6088	junction_1	505261.4800904454	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	35	1078	25.0	-55	True	AATAAA	-14
PB.9232.13	chr5	-	5561	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	-19	3515	-19	2356	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	1	NA	TRUE	NA	NA	NA	C	coding	918	2757	333	3089	40.0	41	False	AATAAA	-24
PB.11827.14	chr9	+	1772	2	incomplete-splice_match	SET	ENST00000322030.12	2915	8	4797	-4	1672	4	5prime_fragment	FALSE	canonical	1	1062975	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8838	False	AATAAA	-20
PB.9232.15	chr5	-	4231	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	-21	4847	-21	1024	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	15	NA	TRUE	NA	NA	NA	C	coding	918	2757	335	3091	65.0	39	False	AGTAAA	-41
PB.9232.14	chr5	-	5361	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	41	3655	12	2216	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	5	NA	TRUE	NA	NA	NA	C	coding	918	2757	273	3029	35.0	1	True	AATAAA	-15
PB.9232.17	chr5	-	2424	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	31	6602	2	-3	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2142	283	2424	70.0	-9	True	AAAAAG	-37
PB.9232.16	chr5	-	3977	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	-20	5100	-20	771	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	1	NA	TRUE	NA	NA	NA	C	coding	918	2757	334	3090	55.0	40	False	AATAAA	-7
PB.10899.1	chr7	+	1761	3	novel_in_catalog	AC004889.1	novel	856	5	NA	NA	37	1200	combination_of_known_junctions	FALSE	canonical	1	52	junction_2	203.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	98	297	1	297	25.0	NA	False	AGTAAA	-19
PB.3247.3	chr13	+	2784	11	full-splice_match	BIVM	ENST00000257336.5	3859	11	70	1005	70	365	multi-exon	FALSE	canonical	1	22874	junction_1	56783.650414533935	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	610	2121	40.0	0	True	NA	NA
PB.3247.2	chr13	+	2939	11	full-splice_match	BIVM	ENST00000257336.5	3859	11	70	850	70	520	multi-exon	FALSE	canonical	1	22874	junction_1	56783.650414533935	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	610	2121	100.0	0	True	NA	NA
PB.3247.1	chr13	+	3723	11	novel_not_in_catalog	BIVM	novel	3859	11	NA	NA	70	0	any annotated donor/acceptor	TRUE	canonical	1	39	junction_1	72738.83945431079	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	542	2053	35.0	0	True	AATAAA	-23
PB.1090.10	chr1	+	3771	11	novel_in_catalog	CD46	novel	3371	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	50646	junction_9	412385.9195545963	NA	4	1	TRUE	NA	NA	NA	C	coding	324	975	157	1131	20.0	-55	True	AATAAA	-16
PB.3247.7	chr13	+	2926	11	novel_in_catalog	BIVM	novel	3859	11	NA	NA	-54	521	combination_of_known_junctions	FALSE	canonical	1	17566	junction_1	57986.75521323813	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	596	2107	100.0	1142	False	NA	NA
PB.3247.6	chr13	+	1998	10	novel_in_catalog	BIVM	novel	3859	11	NA	NA	273	-134	no_combination_of_known_junctions	FALSE	canonical	1	4115	junction_1	57512.72746054231	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	323	1834	25.0	117	False	NA	NA
PB.3247.5	chr13	+	4038	1	novel_in_catalog	BIVM	novel	3859	11	NA	NA	72	-4165	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	2	True	NA	NA
PB.2782.3	chr12	-	3814	1	novel_in_catalog	CCDC59	novel	563	4	NA	NA	3	-1733	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	119	360	1106	1465	85.0	-7	True	AATAAA	-45
PB.4080.3	chr15	+	4432	22	full-splice_match	BLM	ENST00000355112.7	5258	22	28	798	-8	6	multi-exon	FALSE	canonical	1	53827	junction_1	35092.41539020031	NA	0	NA	TRUE	NA	NA	NA	C	coding	1417	4254	91	4344	20.0	-8	True	TATAAA	-21
PB.3247.9	chr13	+	2679	10	novel_in_catalog	BIVM	novel	3859	11	NA	NA	-47	365	no_combination_of_known_junctions	FALSE	canonical	1	4182	junction_1	57492.82761643694	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	505	2016	40.0	1149	False	NA	NA
PB.3247.8	chr13	+	2770	11	novel_in_catalog	BIVM	novel	3859	11	NA	NA	-54	365	combination_of_known_junctions	FALSE	canonical	1	17566	junction_1	57986.75521323813	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	596	2107	40.0	1142	False	NA	NA
PB.1090.16	chr1	+	2466	12	novel_in_catalog	CD46	novel	3371	14	NA	NA	0	197	intron_retention	FALSE	canonical	1	520171	junction_11	404258.8670055303	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	157	1131	70.0	-55	True	AAAAAG	-41
PB.1090.15	chr1	+	2635	11	full-splice_match	CD46	ENST00000357714.5	3188	11	0	553	0	180	multi-exon	FALSE	canonical	1	476104	junction_6	374825.1013814443	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	157	1266	30.0	-55	True	AATAAA	-18
PB.779.1	chr1	-	1675	14	novel_not_in_catalog	UBE2Q1	novel	3210	13	NA	NA	-83	424	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	353764.1444392413	NA	0	NA	TRUE	NA	NA	NA	A	coding	253	762	461	1222	25.0	-56	True	AAAACA	-20
PB.1090.14	chr1	+	2898	11	full-splice_match	CD46	ENST00000357714.5	3188	11	0	290	0	-1	multi-exon	FALSE	canonical	1	476104	junction_6	374825.1013814443	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	157	1266	20.0	-55	True	AATAAA	-25
PB.3282.3	chr14	+	2866	1	novel_in_catalog	DUXAP9	novel	665	6	NA	NA	-7118	-4178	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	152	459	481	939	75.0	NA	False	NA	NA
PB.3167.2	chr13	-	4071	14	novel_not_in_catalog	RCBTB1	novel	3816	11	NA	NA	6	-5	any annotated donor/acceptor	FALSE	canonical	1	3847	junction_9	75846.90722983608	NA	5	NA	TRUE	NA	NA	NA	C	coding	338	1017	884	1900	30.0	429	False	AATAAA	-16
PB.3828.5	chr15	+	2574	13	full-splice_match	WDR76	ENST00000381246.6	2586	13	12	0	4	0	multi-exon	FALSE	canonical	1	14319	junction_1	64203.251640568975	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	260	1948	30.0	-18	True	ATTAAA	-20
PB.3656.20	chr14	+	1076	9	full-splice_match	PAPOLA	ENST00000557320.5	3264	9	-3	2191	0	-2	multi-exon	FALSE	canonical	1	841227	junction_8	248525.80462147185	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	196	1053	25.0	8	True	AATAAA	-18
PB.2113.1	chr11	+	2289	4	novel_not_in_catalog	GSTP1	novel	961	7	NA	NA	-24	1	intron_retention	FALSE	canonical	0	0	junction_1	5466090.0677468	NA	5	1	TRUE	NA	NA	NA	C	coding	159	480	1736	2215	20.0	3	True	AATAAA	-15
PB.2113.2	chr11	+	3005	1	genic	GSTP1	novel	NA	NA	NA	NA	0	160	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	118	357	2110	2466	75.0	0	True	NA	NA
PB.2113.3	chr11	+	740	7	full-splice_match	GSTP1	ENST00000642444.1	741	7	1	0	1	0	multi-exon	FALSE	canonical	1	5762788	junction_1	2162792.3503431664	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	32	664	15.0	1	True	AATAAA	-17
PB.2113.4	chr11	+	2838	1	novel_in_catalog	GSTP1	novel	961	7	NA	NA	3	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	118	357	2107	2463	20.0	3	True	AATAAA	-16
PB.3656.25	chr14	+	3671	19	incomplete-splice_match	PAPOLA	ENST00000392990.6	2588	21	-143	7526	3	1952	3prime_fragment	FALSE	canonical	1	516762	junction_12	292710.78082270816	NA	1	NA	TRUE	NA	NA	NA	C	coding	671	2016	179	2194	30.0	25	True	NA	NA
PB.598.4	chr1	+	4096	16	novel_in_catalog	AMPD2	novel	572	5	NA	NA	0	3	intron_retention	FALSE	canonical	1	135165	junction_1	117940.94989548325	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	1494	3194	5.0	9	True	AATAAA	-18
PB.982.2	chr1	-	2328	16	novel_not_in_catalog	NCF2	novel	2168	13	NA	NA	92	0	any annotated donor/acceptor	FALSE	canonical	1	15576	junction_15	171687.6309970976	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	193	1773	25.0	0	True	AATAAA	-21
PB.10102.10	chr6	-	2855	4	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	201540	-2	any annotated donor/acceptor	FALSE	canonical	1	155	junction_3	92454.59841817858	NA	2	NA	TRUE	NA	NA	NA	C	coding	71	216	195	410	30.0	NA	False	AATAAA	-16
PB.3167.1	chr13	-	4271	16	novel_not_in_catalog	RCBTB1	novel	3816	11	NA	NA	23	0	any annotated donor/acceptor	FALSE	canonical	1	2382	junction_6	89501.60378411601	NA	18	4	TRUE	NA	NA	NA	C	coding	223	672	1424	2095	20.0	-10	True	AATAAA	-21
PB.10102.11	chr6	-	3767	16	full-splice_match	RNGTT	ENST00000369485.8	4553	16	89	697	-71	-697	multi-exon	FALSE	canonical	1	124765	junction_14	22194.7096965821	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	224	2017	75.0	-15	False	NA	NA
PB.10102.12	chr6	-	2549	4	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	201782	-697	any annotated donor/acceptor	FALSE	canonical	1	2824	junction_3	91198.63955978485	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.7110.1	chr2	+	3624	14	full-splice_match	SEPT2	ENST00000360051.7	3613	14	-11	0	8	0	multi-exon	FALSE	canonical	1	3428	junction_1	1005335.4569056914	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	452	1537	25.0	-18	True	AATAAA	-20
PB.7110.2	chr2	+	3737	14	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1147239.9008471435	NA	4	1	TRUE	NA	NA	NA	C	coding	423	1272	379	1650	25.0	-17	True	AATAAA	-20
PB.10102.13	chr6	-	3316	16	full-splice_match	RNGTT	ENST00000369485.8	4553	16	103	1134	-57	-1134	multi-exon	FALSE	canonical	1	124765	junction_14	22194.7096965821	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	210	2003	40.0	-1	True	AGTAAA	-8
PB.7110.4	chr2	+	3400	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	56559	junction_2	1070401.7772209116	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	729	1313	25.0	-16	True	AATAAA	-20
PB.3167.4	chr13	-	3948	12	novel_in_catalog	RCBTB1	novel	3816	11	NA	NA	-3	-8	no_combination_of_known_junctions	FALSE	canonical	1	6129	junction_11	61673.44294824888	NA	3	NA	TRUE	NA	NA	NA	C	coding	531	1596	185	1780	45.0	420	False	AATAAA	-13
PB.7110.6	chr2	+	1954	1	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-2	583	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-12	True	AATAAA	-40
PB.7110.7	chr2	+	1979	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-33	-76	combination_of_known_junctions	FALSE	canonical	1	8022	junction_1	939133.3128111893	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	401	1366	35.0	2	True	AATAAA	-15
PB.7110.8	chr2	+	3502	13	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	45485	junction_12	1046656.0539211261	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	306	1391	25.0	3	True	AATAAA	-20
PB.4567.2	chr16	-	4939	2	incomplete-splice_match	CMC2	ENST00000630396.1	481	5	11	11836	0	-11814	3prime_fragment	FALSE	canonical	1	752224	junction_1	0.0	NA	10	NA	TRUE	NA	NA	NA	A	coding	47	144	189	332	75.0	-2	True	NA	NA
PB.4567.1	chr16	-	2395	4	novel_in_catalog	ARLNC1	novel	2218	3	NA	NA	-114291	-1	no_combination_of_known_junctions	FALSE	canonical	1	474	junction_2	349078.11130843865	NA	0	NA	TRUE	NA	NA	NA	A	coding	37	114	189	302	20.0	-2	True	AATAAA	-20
PB.4080.8	chr15	+	4311	21	novel_in_catalog	BLM	novel	5258	22	NA	NA	7	7	no_combination_of_known_junctions	FALSE	canonical	1	2437	junction_12	44557.346456560896	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	76	2634	15.0	7	True	TATAAA	-22
PB.2207.4	chr11	+	4206	1	novel_in_catalog	EED	novel	2223	12	NA	NA	36	-19149	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-135	False	NA	NA
PB.2207.5	chr11	+	2336	11	novel_in_catalog	EED	novel	2223	12	NA	NA	-7	3	intron_retention	FALSE	canonical	1	107804	junction_3	100231.90018172858	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	15	1169	15.0	-20	True	AATAAA	-20
PB.2207.1	chr11	+	1635	13	full-splice_match	EED	ENST00000351625.10	1696	13	-19	80	-19	-2	multi-exon	FALSE	canonical	1	37337	junction_10	138058.90091963968	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	27	1427	20.0	-32	True	AATAAA	-11
PB.2207.2	chr11	+	1551	12	full-splice_match	EED	ENST00000263360.10	2223	12	672	0	-7	0	multi-exon	FALSE	canonical	1	107804	junction_3	102002.59606330073	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	15	1340	25.0	-20	True	AATAAA	-14
PB.2207.3	chr11	+	1914	11	novel_in_catalog	EED	novel	2223	12	NA	NA	18	0	no_combination_of_known_junctions	FALSE	canonical	1	2255	junction_5	137040.3372615523	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	1131	1703	25.0	-18	True	AATAAA	-14
PB.3257.4	chr13	+	2694	22	incomplete-splice_match	COL4A2	ENST00000360467.6	6494	48	49	53465	18	-27	3prime_fragment	FALSE	canonical	1	646905	junction_20	176054.64234771376	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	289	1965	50.0	0	True	NA	NA
PB.693.1	chr1	+	2920	22	novel_in_catalog	AC242426.2	novel	573	3	NA	NA	69270	43101	intron_retention	FALSE	canonical	1	53011	junction_10	143167.723527828	NA	0	NA	TRUE	NA	NA	NA	B	coding	470	1413	1257	2669	15.0	-31	False	AATAAA	-13
PB.3257.7	chr13	+	3386	18	incomplete-splice_match	COL4A2	ENST00000650225.1	3630	19	2295	4	2270	-4	5prime_fragment	FALSE	canonical	1	1019459	junction_14	148082.03679500223	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	59	2554	25.0	NA	False	AATAAA	-20
PB.3257.1	chr13	+	6283	48	full-splice_match	COL4A2	ENST00000360467.6	6494	48	25	186	3	-4	multi-exon	TRUE	canonical	1	646905	junction_20	206377.18151065655	NA	2	NA	TRUE	NA	NA	NA	C	coding	1712	5139	313	5451	25.0	3	True	AATAAA	-20
PB.3257.2	chr13	+	3274	33	incomplete-splice_match	COL4A2	ENST00000360467.6	6494	48	21	28249	-1	853	3prime_fragment	FALSE	canonical	1	646905	junction_20	177859.40674129725	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2958	317	3274	60.0	-1	True	NA	NA
PB.3257.3	chr13	+	2866	30	novel_in_catalog	COL4A2	novel	484	5	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	3500	junction_29	250767.36193872022	NA	1	NA	TRUE	NA	NA	NA	C	coding	814	2445	315	2759	20.0	1	True	AATACA	-14
PB.1443.3	chr10	+	2529	8	full-splice_match	VPS26A	ENST00000395098.5	2554	8	23	2	-11	-2	multi-exon	FALSE	canonical	1	9747	junction_7	214338.6861351036	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	104	859	30.0	-9	True	AATAAA	-10
PB.1443.2	chr10	+	1547	9	full-splice_match	VPS26A	ENST00000263559.10	2697	9	21	1129	-13	368	multi-exon	FALSE	canonical	1	214248	junction_6	160549.4143900874	NA	3	NA	TRUE	NA	NA	NA	C	coding	327	984	106	1089	15.0	-11	True	AATAAA	-21
PB.1443.1	chr10	+	2833	10	novel_not_in_catalog	VPS26A	novel	3229	10	NA	NA	-34	-4	any annotated donor/acceptor	FALSE	canonical	1	4433	junction_3	180970.18086830268	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	288	1250	40.0	-66	False	AATAAA	-8
PB.1443.7	chr10	+	2090	9	full-splice_match	VPS26A	ENST00000263559.10	2697	9	37	570	3	-570	multi-exon	FALSE	canonical	1	214248	junction_6	160549.4143900874	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	90	1073	20.0	5	True	ATTAAA	-38
PB.1443.6	chr10	+	2594	8	novel_in_catalog	VPS26A	novel	3229	10	NA	NA	-4	-4	no_combination_of_known_junctions	FALSE	canonical	1	1697	junction_6	210045.78332878783	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	97	1011	40.0	-2	True	AATAAA	-8
PB.1443.5	chr10	+	2600	8	novel_in_catalog	VPS26A	novel	3229	10	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	1	27147	junction_2	161897.87417104043	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	355	1005	15.0	-3	True	AATAAA	-20
PB.1443.4	chr10	+	2645	9	full-splice_match	VPS26A	ENST00000263559.10	2697	9	48	4	-12	-4	multi-exon	FALSE	canonical	1	214248	junction_6	160549.4143900874	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	79	1062	40.0	16	True	AATAAA	-8
PB.2564.25	chr12	-	2353	17	full-splice_match	SLC38A1	ENST00000546893.5	2332	17	49	-70	-27	70	multi-exon	FALSE	canonical	1	252400	junction_16	180867.33016702076	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	415	1878	30.0	-10	True	NA	NA
PB.2564.24	chr12	-	2591	17	full-splice_match	SLC38A1	ENST00000546893.5	2332	17	76	-335	0	335	multi-exon	FALSE	canonical	1	252400	junction_16	180867.33016702076	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	388	1851	35.0	-1	True	ATTAAA	-25
PB.2564.27	chr12	-	2178	17	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	1186	31	any annotated donor/acceptor	FALSE	canonical	1	5870	junction_16	228869.3882853053	NA	1	1	TRUE	NA	NA	NA	C	coding	487	1464	279	1742	25.0	-21	True	NA	NA
PB.2564.26	chr12	-	2407	17	full-splice_match	SLC38A1	ENST00000398637.9	8066	17	227	5432	21	70	multi-exon	FALSE	canonical	1	233335	junction_16	184336.38072077464	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	469	1932	30.0	-3	True	NA	NA
PB.2564.21	chr12	-	3114	19	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	279	-1	any annotated donor/acceptor	FALSE	canonical	1	285	junction_18	313925.1477860704	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	483	1946	90.0	-1	True	NA	NA
PB.6338.42	chr2	-	4823	21	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	-134	-196	any annotated donor/acceptor	FALSE	canonical	1	3605	junction_20	235871.04656646607	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	98	3298	35.0	1268	False	ATTAAA	-24
PB.2564.23	chr12	-	2677	17	full-splice_match	SLC38A1	ENST00000398637.9	8066	17	221	5168	15	334	multi-exon	FALSE	canonical	1	233335	junction_16	184336.38072077464	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	475	1938	35.0	1246	False	ATTAAA	-24
PB.2564.22	chr12	-	2859	17	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	-37	-52	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	230078.93927926366	NA	2	1	TRUE	NA	NA	NA	C	coding	487	1464	279	1742	35.0	-17	True	TATAAA	-36
PB.2564.29	chr12	-	4772	16	incomplete-splice_match	SLC38A1	ENST00000546893.5	2332	17	124	6084	0	1076	3prime_fragment	FALSE	canonical	1	252400	junction_15	185044.97119077717	NA	7	NA	TRUE	NA	NA	NA	C	coding	473	1422	343	1764	70.0	47	True	NA	NA
PB.10381.7	chr7	+	4359	12	full-splice_match	WIPI2	ENST00000382384.6	1948	12	-48	-2363	-21	7	multi-exon	FALSE	canonical	1	259902	junction_1	212710.66816404246	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	196	1473	40.0	-8	True	CATAAA	-13
PB.10381.6	chr7	+	2253	14	novel_not_in_catalog	WIPI2	novel	4476	13	NA	NA	-22	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	324369.1873279016	NA	7	2	TRUE	NA	NA	NA	C	coding	454	1365	114	1478	30.0	-9	True	ATTAAA	-19
PB.10381.5	chr7	+	2251	12	full-splice_match	WIPI2	ENST00000382384.6	1948	12	-50	-253	-23	0	multi-exon	FALSE	canonical	1	259902	junction_1	212710.66816404246	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	198	1475	30.0	-10	True	ATTAAA	-20
PB.10381.4	chr7	+	2297	12	full-splice_match	WIPI2	ENST00000401525.7	2112	12	26	-211	-24	12	multi-exon	FALSE	canonical	1	259902	junction_1	201434.0622997884	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	199	1509	30.0	-11	True	ATTAAA	-32
PB.2989.1	chr12	-	2880	5	novel_not_in_catalog	VPS37B	novel	3028	4	NA	NA	1	-3	intron_retention	FALSE	canonical	1	1776	junction_4	184065.16002543093	NA	7	1	TRUE	NA	NA	NA	C	coding	164	495	65	559	25.0	-16	True	AATAAA	-17
PB.10381.2	chr7	+	1637	12	full-splice_match	WIPI2	ENST00000401525.7	2112	12	15	460	15	0	multi-exon	FALSE	canonical	1	259902	junction_1	201434.0622997884	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	210	1520	75.0	-70	False	NA	NA
PB.4787.9	chr17	-	1724	15	incomplete-splice_match	NCOR1	ENST00000582357.5	1877	16	-16	11270	3	-11245	3prime_fragment	FALSE	canonical	1	87496	junction_6	143125.99908457996	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1470	255	1724	65.0	-12	True	NA	NA
PB.2989.2	chr12	-	2703	4	full-splice_match	VPS37B	ENST00000267202.6	3028	4	319	6	2	-6	multi-exon	FALSE	canonical	1	300843	junction_3	59588.226249449275	NA	2	NA	TRUE	NA	NA	NA	C	coding	285	858	64	921	30.0	-15	True	AATAAA	-14
PB.4787.7	chr17	-	1849	16	novel_in_catalog	NCOR1	novel	10720	46	NA	NA	2	-17	combination_of_known_junctions	FALSE	canonical	1	87496	junction_7	139124.09870503706	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1593	256	1848	85.0	-13	True	NA	NA
PB.4787.6	chr17	-	1917	16	novel_in_catalog	NCOR1	novel	10720	46	NA	NA	2	-41	combination_of_known_junctions	FALSE	canonical	1	4998	junction_14	158210.94448581405	NA	2	NA	TRUE	NA	NA	NA	C	coding	514	1542	375	1916	70.0	-13	True	NA	NA
PB.4787.5	chr17	-	1971	17	full-splice_match	NCOR1	ENST00000436828.5	1969	17	-19	17	0	-17	multi-exon	FALSE	canonical	1	4998	junction_15	169319.01113743428	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1593	378	1970	85.0	-16	True	NA	NA
PB.4787.4	chr17	-	2125	17	novel_not_in_catalog	NCOR1	novel	10720	46	NA	NA	0	-17	any annotated donor/acceptor	FALSE	canonical	1	2978	junction_7	177482.43229294862	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	377	1249	85.0	-15	True	NA	NA
PB.4787.3	chr17	-	2448	16	novel_not_in_catalog	NCOR1	novel	10720	46	NA	NA	1	-17	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	160301.32949384212	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1569	879	2447	85.0	-14	True	NA	NA
PB.4787.2	chr17	-	2498	16	novel_not_in_catalog	NCOR1	novel	10720	46	NA	NA	1	-56	any annotated donor/acceptor	FALSE	canonical	1	780	junction_14	158805.05054554573	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1527	971	2497	70.0	-3	True	NA	NA
PB.4787.1	chr17	-	2678	16	novel_not_in_catalog	NCOR1	novel	10720	46	NA	NA	3	-17	any annotated donor/acceptor	FALSE	canonical	1	6305	junction_14	158027.82167178314	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1566	1112	2677	85.0	-12	True	NA	NA
PB.10381.8	chr7	+	2169	11	novel_in_catalog	WIPI2	novel	4476	13	NA	NA	-20	4	no_combination_of_known_junctions	FALSE	canonical	1	10714	junction_1	274799.5809841056	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	490	1389	25.0	-7	True	ATTAAA	-24
PB.7658.4	chr22	+	7537	37	full-splice_match	CABIN1	ENST00000398319.6	7480	37	-57	0	13	0	multi-exon	FALSE	canonical	1	85480	junction_1	96827.5577338107	NA	0	NA	TRUE	NA	NA	NA	C	coding	2220	6663	443	7105	5.0	21	True	AATAAA	-13
PB.7837.6	chr22	-	2575	7	full-splice_match	RRP7A	ENST00000323013.6	3801	7	-1	1227	-1	-1227	multi-exon	FALSE	canonical	1	9975	junction_2	291903.20223858266	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	18	860	75.0	-10	True	NA	NA
PB.693.3	chr1	+	2896	6	full-splice_match	CHD1L	ENST00000492728.1	662	6	-85	-2149	20	2149	multi-exon	FALSE	canonical	1	174357	junction_1	68545.69023534594	NA	2	NA	TRUE	NA	NA	NA	C	coding	207	624	44	667	90.0	-25	False	NA	NA
PB.1142.3	chr1	+	2537	7	novel_not_in_catalog	BROX	novel	4124	13	NA	NA	1	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	110555.6787349956	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	112	624	20.0	1	True	AATAAA	-17
PB.6129.1	chr19	-	3628	16	novel_in_catalog	GYS1	novel	3574	16	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	1	8333	junction_15	159987.52243949805	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	256	2466	30.0	-1	True	AATACA	-19
PB.7658.2	chr22	+	7225	37	full-splice_match	CABIN1	ENST00000263119.9	7222	37	-3	0	-3	0	multi-exon	FALSE	canonical	1	52821	junction_1	98305.70318526402	NA	0	NA	TRUE	NA	NA	NA	C	coding	2220	6663	131	6793	5.0	8	True	AATAAA	-13
PB.1051.50	chr1	+	3425	14	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	2	-10	intron_retention	FALSE	canonical	1	19678	junction_6	77460.53299630081	NA	4	NA	TRUE	NA	NA	NA	C	coding	512	1536	1890	3425	60.0	74	False	NA	NA
PB.7653.3	chr22	+	1675	9	full-splice_match	SMARCB1	ENST00000644036.1	5210	9	41	3494	4	9	multi-exon	FALSE	canonical	1	605624	junction_2	376679.30407076306	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	184	1341	30.0	9	True	AATAAA	-28
PB.7658.1	chr22	+	2786	16	incomplete-splice_match	CABIN1	ENST00000263119.9	7222	37	-14	111034	-14	-3589	3prime_fragment	FALSE	canonical	1	52821	junction_1	53237.02166909373	NA	2	NA	TRUE	NA	NA	NA	C	coding	771	2316	142	2457	55.0	-3	True	AATAAA	-14
PB.7653.4	chr22	+	1645	9	full-splice_match	SMARCB1	ENST00000407422.8	1730	9	60	25	8	10	multi-exon	FALSE	canonical	1	636474	junction_2	370663.10597897973	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	180	1310	25.0	13	True	AATAAA	-29
PB.9716.1	chr6	-	2725	1	antisense	novelGene_AL031123.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	8034	False	AATATA	-21
PB.1536.2	chr10	+	6034	27	full-splice_match	TNKS2	ENST00000371627.4	6157	27	139	-16	139	16	multi-exon	FALSE	canonical	1	186410	junction_1	65753.82585867727	NA	2	NA	TRUE	NA	NA	NA	C	coding	1166	3501	241	3741	45.0	24	True	AATAAA	-31
PB.1536.3	chr10	+	2738	16	incomplete-splice_match	TNKS2	ENST00000371627.4	6157	27	73	22512	73	-22512	3prime_fragment	FALSE	canonical	1	186410	junction_1	60943.36486702679	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	307	2373	85.0	5	True	NA	NA
PB.1536.1	chr10	+	4312	27	full-splice_match	TNKS2	ENST00000371627.4	6157	27	51	1794	51	-1794	multi-exon	TRUE	canonical	1	186410	junction_1	65753.82585867727	NA	0	NA	TRUE	NA	NA	NA	C	coding	1166	3501	329	3829	35.0	-17	True	TATAAA	-27
PB.1536.6	chr10	+	5096	20	novel_in_catalog	TNKS2	novel	6157	27	NA	NA	129	93	no_combination_of_known_junctions	FALSE	canonical	1	188	junction_6	139079.5507772799	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	1059	2726	40.0	14	True	AATAAA	-13
PB.1536.7	chr10	+	3999	13	novel_not_in_catalog	TNKS2	novel	6157	27	NA	NA	43070	-1	any annotated donor/acceptor	FALSE	canonical	1	1242	junction_5	116239.14215518034	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	620	1723	20.0	3316	False	AATAAA	-14
PB.1536.4	chr10	+	4598	27	full-splice_match	TNKS2	ENST00000371627.4	6157	27	255	1304	255	-1304	multi-exon	FALSE	canonical	1	186410	junction_1	65753.82585867727	NA	0	NA	TRUE	NA	NA	NA	C	coding	1166	3501	125	3625	65.0	-6558	False	NA	NA
PB.1536.5	chr10	+	2067	16	incomplete-splice_match	TNKS2	ENST00000371627.4	6157	27	168	23088	168	-23088	3prime_fragment	FALSE	canonical	1	186410	junction_1	60943.36486702679	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1854	212	2065	65.0	-6645	False	NA	NA
PB.1142.2	chr1	+	3853	13	full-splice_match	BROX	ENST00000340934.9	4124	13	261	10	255	-10	multi-exon	FALSE	canonical	1	93973	junction_1	92667.19688517375	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	146	1381	20.0	-13	True	AATAAA	-17
PB.10134.3	chr6	+	2594	2	incomplete-splice_match	CRYBG1	ENST00000369066.7	7553	20	672	49249	672	-31103	3prime_fragment	FALSE	canonical	1	144766	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1827	767	2593	75.0	4	True	NA	NA
PB.12176.1	chrX	+	3912	27	novel_in_catalog	DIAPH2	novel	3782	27	NA	NA	92	-918	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	52369.863581057	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	256	3549	80.0	-38	True	TTTAAA	-28
PB.12176.3	chrX	+	3930	28	novel_in_catalog	DIAPH2	novel	3782	27	NA	NA	107	-918	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	50879.674357894946	NA	0	NA	TRUE	NA	NA	NA	C	coding	1108	3327	241	3567	80.0	-23	True	TTTAAA	-28
PB.12176.2	chrX	+	3418	27	novel_in_catalog	DIAPH2	novel	3782	27	NA	NA	-6	-1	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	51381.43725276438	NA	3	1	TRUE	NA	NA	NA	C	coding	1092	3279	49	3327	15.0	-1116	False	AGTAAA	-19
PB.12176.5	chrX	+	3955	27	full-splice_match	DIAPH2	ENST00000373061.7	4983	27	110	918	61	-918	multi-exon	TRUE	non_canonical	0	0	junction_23	46473.57697061619	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	287	3592	80.0	-4	True	TTTAAA	-28
PB.12176.4	chrX	+	3577	28	full-splice_match	DIAPH2	ENST00000373054.5	3376	28	-136	-65	-136	-5	multi-exon	FALSE	non_canonical	0	0	junction_24	49916.35552639072	NA	1	NA	TRUE	NA	NA	NA	C	coding	1103	3312	179	3490	25.0	-1246	False	AGTAAA	-15
PB.12176.7	chrX	+	2377	19	incomplete-splice_match	DIAPH2	ENST00000373054.5	3376	28	-240	396801	65	-396801	3prime_fragment	FALSE	canonical	1	15468	junction_4	39639.587893276155	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2094	283	2376	45.0	0	True	NA	NA
PB.12176.6	chrX	+	3634	26	novel_in_catalog	DIAPH2	novel	3782	27	NA	NA	65	-1	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_22	46641.43644724506	NA	0	NA	TRUE	NA	NA	NA	C	coding	1085	3258	283	3540	10.0	0	True	AGTAAA	-22
PB.12176.9	chrX	+	4827	27	novel_in_catalog	DIAPH2	novel	3782	27	NA	NA	94	-1	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	52369.863581057	NA	2	NA	TRUE	NA	NA	NA	C	coding	1097	3294	254	3547	25.0	-36	True	AATAAA	-17
PB.12176.8	chrX	+	3789	28	full-splice_match	DIAPH2	ENST00000373054.5	3376	28	-212	-201	93	128	multi-exon	FALSE	non_canonical	0	0	junction_24	49916.35552639072	NA	0	NA	TRUE	NA	NA	NA	C	coding	1103	3312	255	3566	55.0	-37	True	AATATA	-9
PB.11285.8	chr8	+	1862	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-14	282	0	104	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	178	1326	15.0	5	True	AATAAA	-19
PB.7079.1	chr2	+	7426	30	novel_in_catalog	DGKD	novel	6297	30	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	1	39847	junction_12	65326.48942924021	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	2747	4789	20.0	-19	True	AATAAA	-23
PB.10875.9	chr7	-	2642	11	incomplete-splice_match	ZC3HAV1	ENST00000242351.9	7100	13	-72	10510	-1	6308	3prime_fragment	FALSE	canonical	1	188558	junction_2	75426.78015559196	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2253	390	2642	60.0	-1	True	TTTAAA	-10
PB.4202.3	chr16	-	2413	1	novel_in_catalog	TIGD7	novel	3612	2	NA	NA	0	-1155	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.4202.2	chr16	-	3422	2	full-splice_match	TIGD7	ENST00000396862.1	3612	2	183	7	-32	-7	multi-exon	FALSE	canonical	1	13661	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	1647	3296	40.0	-33	True	TATAAA	-13
PB.4202.1	chr16	-	3602	3	full-splice_match	TIGD7	ENST00000573695.5	731	3	-31	-2840	-31	-7	multi-exon	FALSE	canonical	1	3034	junction_2	179.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	1827	3476	40.0	-32	True	TATAAA	-13
PB.266.23	chr1	-	2846	5	full-splice_match	AK2	ENST00000487289.1	920	5	-16	-1910	8	1910	multi-exon	FALSE	canonical	1	632	junction_2	286059.00213450287	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	33	521	80.0	71	False	NA	NA
PB.266.22	chr1	-	2613	7	novel_in_catalog	AK2	novel	3576	6	NA	NA	8	398	intron_retention	FALSE	canonical	1	632	junction_4	256028.1528489049	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	33	752	40.0	71	False	AATAAA	-15
PB.266.21	chr1	-	1520	7	full-splice_match	AK2	ENST00000373449.6	3586	7	-20	2086	-4	408	multi-exon	FALSE	canonical	1	632	junction_4	246175.01132979	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	63	761	25.0	-12	True	AATAAA	-25
PB.266.20	chr1	-	2824	1	novel_in_catalog	AK2	novel	3576	6	NA	NA	-389	555	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	112	339	1245	1583	10.0	9266	False	AATAAA	-15
PB.3005.13	chr12	+	3503	18	incomplete-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	36	6220	-2	-2480	3prime_fragment	FALSE	canonical	1	109846	junction_1	40330.39109636998	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	213	2546	85.0	1	True	NA	NA
PB.3005.12	chr12	+	4547	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	36	1959	-2	1109	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	1	NA	TRUE	NA	NA	NA	C	coding	856	2571	213	2783	15.0	1	True	ATTAAA	-18
PB.3005.11	chr12	+	4651	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	36	1855	-2	1213	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	1	1	TRUE	NA	NA	NA	C	coding	856	2571	213	2783	40.0	1	True	ATTAAA	-29
PB.3005.10	chr12	+	2960	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	35	3547	-3	-12	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	2	NA	TRUE	NA	NA	NA	C	coding	856	2571	214	2784	55.0	0	True	NA	NA
PB.11357.13	chr8	-	4813	33	novel_in_catalog	PTK2	novel	4955	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	6733	junction_32	143577.15807376217	NA	1	1	TRUE	NA	NA	NA	C	coding	1052	3159	594	3752	30.0	795	False	ATTAAA	-15
PB.693.6	chr1	+	2857	22	novel_in_catalog	AC242426.2	novel	573	3	NA	NA	69294	43101	intron_retention	FALSE	canonical	1	15403	junction_1	138516.56704887975	NA	0	NA	TRUE	NA	NA	NA	B	coding	784	2355	252	2606	15.0	-7	True	AATAAA	-13
PB.11285.6	chr8	+	1594	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-19	555	-5	-66	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	183	1331	30.0	0	True	TATAAA	-16
PB.6044.1	chr19	-	1968	9	full-splice_match	KCNN4	ENST00000648319.1	1956	9	-14	2	-11	-2	multi-exon	FALSE	canonical	1	182276	junction_8	92978.14849031734	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	127	1410	25.0	-15	True	AATAAA	-13
PB.11357.15	chr8	-	4439	31	novel_not_in_catalog	PTK2	novel	4955	32	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	155652.79998846434	NA	2	1	TRUE	NA	NA	NA	C	coding	1032	3099	280	3378	30.0	795	False	ATTAAA	-15
PB.6044.3	chr19	-	2412	8	novel_in_catalog	KCNN4	novel	1190	2	NA	NA	-7	2	intron_retention	FALSE	canonical	1	182276	junction_7	90614.3926881646	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	123	1406	20.0	-11	True	AATAAA	-11
PB.6044.2	chr19	-	1906	8	novel_in_catalog	KCNN4	novel	1190	2	NA	NA	-45	-2	intron_retention	FALSE	canonical	1	16274	junction_7	137503.95950944652	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	161	1348	25.0	-1	True	AATAAA	-13
PB.6044.4	chr19	-	2256	9	novel_in_catalog	KCNN4	novel	1190	2	NA	NA	-49	1	intron_retention	FALSE	canonical	1	14045	junction_6	136700.38673751988	NA	2	1	TRUE	NA	NA	NA	C	coding	167	504	1198	1701	20.0	6	True	AATAAA	-10
PB.3249.1	chr13	-	1740	1	antisense	novelGene_BIVM-ERCC5_AS_novelGene_ERCC5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	104	315	1	315	25.0	0	True	NA	NA
PB.11357.17	chr8	-	4257	30	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	9747	junction_21	134297.43196827956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1016	3051	146	3196	30.0	-9	True	ATTAAA	-15
PB.6338.47	chr2	-	3739	21	full-splice_match	PUM2	ENST00000403432.5	3594	21	-148	3	0	-3	multi-exon	FALSE	canonical	1	242233	junction_9	196833.014489408	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	273	3467	55.0	-17	True	NA	NA
PB.693.7	chr1	+	2968	23	full-splice_match	CHD1L	ENST00000369258.8	2967	23	-3	2	-3	0	multi-exon	FALSE	canonical	1	174357	junction_1	120123.65400717348	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	24	2717	15.0	-5	True	AATAAA	-13
PB.7981.1	chr3	-	5657	35	novel_in_catalog	TOP2B	novel	5358	36	NA	NA	5	1	intron_retention	TRUE	canonical	1	4962	junction_26	354862.2530620546	NA	1	1	TRUE	NA	NA	NA	C	coding	1575	4728	606	5333	15.0	4	True	ATTAAA	-14
PB.11466.14	chr9	-	1899	11	full-splice_match	PSIP1	ENST00000380716.8	1889	11	-20	10	5	0	multi-exon	FALSE	canonical	1	73363	junction_1	209956.63733161663	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	337	1338	55.0	145	False	AATAAA	-10
PB.6610.1	chr2	+	1999	9	full-splice_match	RMND5A	ENST00000283632.4	6301	9	118	4184	118	260	multi-exon	FALSE	canonical	1	308585	junction_1	45539.93366523907	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	378	1553	55.0	-8	True	ATTAAA	-15
PB.8827.30	chr4	-	3808	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-11	-1188	-11	-419	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	230	1579	35.0	-2	True	AATAGA	-11
PB.7981.8	chr3	-	5583	36	full-splice_match	TOP2B	ENST00000435706.6	5389	36	-193	-1	-193	1	multi-exon	FALSE	canonical	1	254780	junction_35	330257.5331843206	NA	4	1	TRUE	NA	NA	NA	C	coding	1621	4866	396	5261	10.0	214	False	ATTAAA	-12
PB.7981.9	chr3	-	5814	36	full-splice_match	TOP2B	ENST00000264331.8	5358	36	-535	79	0	0	multi-exon	FALSE	canonical	1	57332	junction_35	342398.8869831995	NA	0	NA	TRUE	NA	NA	NA	C	coding	1626	4881	611	5491	15.0	-1	True	ATTAAA	-13
PB.11966.13	chrX	+	5072	6	incomplete-splice_match	MSL3	ENST00000648614.1	3595	8	321	-17	0	0	intron_retention	FALSE	canonical	1	134288	junction_5	109959.29857288105	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	624	1037	10.0	0	True	AATAAA	-19
PB.11966.12	chrX	+	3349	7	incomplete-splice_match	MSL3	ENST00000649684.1	3665	11	459	6496	0	0	internal_fragment	FALSE	canonical	1	134288	junction_5	114814.01882960788	NA	3	NA	TRUE	NA	NA	NA	C	coding	137	414	624	1037	35.0	0	True	NA	NA
PB.11966.11	chrX	+	3887	10	incomplete-splice_match	MSL3	ENST00000649684.1	3665	11	459	-154	0	0	5prime_fragment	FALSE	canonical	1	134288	junction_5	101321.22000929933	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	2794	3219	50.0	0	True	AATAAA	-15
PB.11966.10	chrX	+	2156	12	full-splice_match	MSL3	ENST00000649271.1	2250	12	110	-16	17	0	multi-exon	FALSE	canonical	1	20040	junction_1	112276.88337099554	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	421	1488	50.0	-19	True	AATAAA	-15
PB.11966.17	chrX	+	3286	7	incomplete-splice_match	MSL3	ENST00000649797.1	2194	9	663	3	128	0	intron_retention	FALSE	canonical	1	134288	junction_5	102164.70669898136	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	367	1119	10.0	-8035	False	AATAAA	-18
PB.11966.16	chrX	+	2441	1	novel_in_catalog	MSL3	novel	2256	12	NA	NA	-4	-283	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-40	True	NA	NA
PB.11966.15	chrX	+	2123	11	full-splice_match	MSL3	ENST00000482871.6	2339	11	286	-70	107	0	multi-exon	FALSE	canonical	1	134288	junction_5	96122.66252393345	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	388	1455	50.0	-8056	False	AATAAA	-15
PB.11966.14	chrX	+	3423	8	incomplete-splice_match	MSL3	ENST00000649271.1	2250	12	28	7754	28	0	3prime_fragment	FALSE	canonical	1	20040	junction_1	132920.7900743898	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	503	1255	10.0	-101	True	AATAAA	-19
PB.7618.3	chr22	+	2408	9	full-splice_match	TANGO2	ENST00000456048.5	2439	9	31	0	-2	0	multi-exon	FALSE	canonical	1	26772	junction_1	89936.80019706894	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	192	1145	10.0	-12	True	AATAAA	-23
PB.7618.2	chr22	+	2564	9	novel_in_catalog	TANGO2	novel	745	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	22983	junction_8	91766.33704678626	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	192	1301	10.0	-12	True	AATAAA	-23
PB.1467.7	chr10	-	3552	3	full-splice_match	MRPS16	ENST00000372945.7	2634	3	40	-958	-19	958	multi-exon	FALSE	canonical	1	1270725	junction_2	82025.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	137	414	172	585	30.0	22	False	ATTAAA	-21
PB.1467.6	chr10	-	5589	7	novel_in_catalog	DNAJC9	novel	362	3	NA	NA	-3782	-8	intron_retention	FALSE	canonical	1	50422	junction_1	562040.9100847702	NA	2	NA	TRUE	NA	NA	NA	B	coding	260	783	4239	5021	20.0	-26	True	AATAAA	-15
PB.7618.7	chr22	+	2276	9	full-splice_match	TANGO2	ENST00000327374.8	2273	9	-3	0	-2	0	multi-exon	FALSE	canonical	1	59277	junction_1	78003.12273196183	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	182	1012	5.0	-7	True	AATAAA	-24
PB.7618.6	chr22	+	2375	7	novel_in_catalog	TANGO2	novel	745	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	22983	junction_6	107901.28321448885	NA	2	NA	TRUE	NA	NA	NA	C	coding	307	924	189	1112	10.0	-9	True	AATAAA	-23
PB.7618.5	chr22	+	1981	7	full-splice_match	TANGO2	ENST00000398042.6	2011	7	29	1	-1	0	multi-exon	FALSE	canonical	1	26772	junction_1	110518.99419054124	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	74	718	10.0	-11	True	AATAAA	-23
PB.7618.4	chr22	+	2168	9	novel_in_catalog	TANGO2	novel	745	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	26772	junction_1	84472.90653064079	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	75	905	10.0	-12	True	AATAAA	-23
PB.12067.2	chrX	+	4471	28	novel_in_catalog	HDAC6	novel	583	7	NA	NA	6	3	intron_retention	FALSE	canonical	1	83526	junction_1	94661.26283043635	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	1570	4113	50.0	-27	True	AATAAA	-13
PB.12067.3	chrX	+	4560	27	novel_in_catalog	HDAC6	novel	583	7	NA	NA	10	3	intron_retention	FALSE	canonical	1	83526	junction_1	94843.17117906683	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	1659	4202	50.0	-23	True	AATAAA	-13
PB.9874.17	chr6	-	3948	26	novel_not_in_catalog	BAG6	novel	488	2	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	canonical	1	38470	junction_14	571329.1784664248	NA	1	NA	TRUE	NA	NA	NA	C	coding	1173	3522	326	3847	25.0	8057	False	AATAAA	-29
PB.12067.1	chrX	+	4452	30	novel_in_catalog	HDAC6	novel	583	7	NA	NA	10	2	intron_retention	TRUE	canonical	1	1179	junction_1	112874.80557963197	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	613	4095	50.0	8	True	AATAAA	-12
PB.12067.6	chrX	+	4174	28	novel_in_catalog	HDAC6	novel	583	7	NA	NA	4	3	intron_retention	FALSE	canonical	1	33640	junction_1	100215.57941159197	NA	3	1	TRUE	NA	NA	NA	C	coding	860	2583	1234	3816	50.0	23	True	AATAAA	-13
PB.12067.7	chrX	+	4115	29	full-splice_match	HDAC6	ENST00000644068.1	4147	29	26	6	7	3	multi-exon	FALSE	canonical	1	40216	junction_1	99073.30921554184	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	275	3757	50.0	26	True	AATAAA	-13
PB.12067.4	chrX	+	4093	29	full-splice_match	HDAC6	ENST00000334136.10	4196	29	91	12	2	3	multi-exon	FALSE	canonical	1	83526	junction_1	95420.02319666476	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	253	3735	50.0	19	True	AATAAA	-13
PB.12067.5	chrX	+	4120	29	novel_not_in_catalog	HDAC6	novel	583	7	NA	NA	-2	3	intron_retention	FALSE	canonical	1	1353	junction_27	105018.37355075014	NA	2	NA	TRUE	NA	NA	NA	C	coding	1153	3462	301	3762	50.0	-782	False	AATAAA	-13
PB.9874.19	chr6	-	3661	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	97477	junction_20	659963.8018274177	NA	2	NA	TRUE	NA	NA	NA	C	coding	1094	3285	276	3560	25.0	-1	True	AATAAA	-29
PB.9874.18	chr6	-	3697	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	22457	junction_24	580779.5626293067	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	255	3596	25.0	8626	False	AATAAA	-29
PB.6375.21	chr2	-	3573	20	novel_not_in_catalog	GTF3C2	novel	3992	19	NA	NA	16	-35	any annotated donor/acceptor	FALSE	canonical	1	1718	junction_19	153746.8068975995	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	491	3226	20.0	524	False	AGTAAA	-19
PB.7490.8	chr21	-	2545	1	genic	URB1	novel	NA	NA	NA	NA	-2	-56275	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	150	453	119	571	70.0	-17	True	NA	NA
PB.6375.23	chr2	-	1853	12	incomplete-splice_match	GTF3C2	ENST00000264720.7	3882	19	248	7757	-19	-1	3prime_fragment	FALSE	canonical	1	74792	junction_11	104553.16408332514	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1779	73	1851	15.0	3	True	AATAAA	-31
PB.6375.22	chr2	-	3006	19	full-splice_match	GTF3C2	ENST00000264720.7	3882	19	270	606	3	42	multi-exon	FALSE	canonical	1	74792	junction_18	119927.58344277115	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	51	2786	25.0	-1	True	GGGGCT	-22
PB.7490.5	chr21	-	3624	12	novel_in_catalog	URB1	novel	10832	39	NA	NA	-353	-3185	combination_of_known_junctions	FALSE	canonical	1	1240	junction_11	66614.43660261863	NA	3	2	TRUE	NA	NA	NA	C	coding	669	2010	900	2909	85.0	-19	True	NA	NA
PB.7490.4	chr21	-	3762	12	novel_in_catalog	URB1	novel	10832	39	NA	NA	-333	-3027	combination_of_known_junctions	FALSE	canonical	1	1240	junction_11	66614.43660261863	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	880	2889	25.0	1	True	AATAAA	-16
PB.7490.7	chr21	-	7471	39	full-splice_match	URB1	ENST00000382751.3	10832	39	14	3347	14	-3347	multi-exon	FALSE	canonical	1	139149	junction_25	34496.278241463464	NA	0	NA	TRUE	NA	NA	NA	C	coding	2271	6816	103	6918	65.0	-1	True	NA	NA
PB.7490.6	chr21	-	7644	39	full-splice_match	URB1	ENST00000382751.3	10832	39	3	3185	3	-3185	multi-exon	FALSE	canonical	1	139149	junction_25	34496.278241463464	NA	6	3	TRUE	NA	NA	NA	C	coding	2271	6816	114	6929	85.0	-12	True	NA	NA
PB.7490.3	chr21	-	7808	39	full-splice_match	URB1	ENST00000382751.3	10832	39	3	3021	3	-3021	multi-exon	FALSE	canonical	1	139149	junction_25	34496.278241463464	NA	0	NA	TRUE	NA	NA	NA	C	coding	2271	6816	114	6929	35.0	-12	True	AATAAA	-22
PB.9009.1	chr4	-	7079	21	full-splice_match	OTUD4	ENST00000454497.6	7069	21	-12	2	-12	-2	multi-exon	FALSE	canonical	1	7787	junction_20	50922.21407821443	NA	5	NA	TRUE	NA	NA	NA	C	coding	1049	3150	151	3300	10.0	933	False	ATTAAA	-13
PB.1109.6	chr1	+	2430	15	full-splice_match	DTL	ENST00000366991.4	4573	15	171	1972	-98	-1560	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	144	2336	35.0	-45	True	AATACA	-13
PB.6185.1	chr19	+	4014	5	full-splice_match	ZNF808	ENST00000359798.8	3600	5	10	-424	0	424	multi-exon	FALSE	canonical	1	31599	junction_1	4713.846120738351	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	171	2882	80.0	-26	True	NA	NA
PB.5753.1	chr19	-	1747	10	full-splice_match	FBXW9	ENST00000393261.7	1738	10	-6	-3	-6	3	multi-exon	FALSE	canonical	1	72417	junction_9	37563.39857716108	NA	0	NA	TRUE	NA	NA	NA	A	coding	458	1377	69	1445	10.0	-19	True	AATAAA	-24
PB.6185.2	chr19	+	3882	4	full-splice_match	ZNF808	ENST00000486474.5	553	4	0	-3329	0	424	multi-exon	FALSE	canonical	1	22460	junction_3	5236.852553458677	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	249	2750	80.0	-21	True	NA	NA
PB.414.2	chr1	-	3521	1	novel_in_catalog	ECHDC2	novel	1446	8	NA	NA	0	-4486	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	2	True	NA	NA
PB.2761.1	chr12	+	4377	3	full-splice_match	THAP2	ENST00000308086.2	5719	3	1344	-2	-128	2	multi-exon	FALSE	canonical	1	45159	junction_1	1785.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	228	687	158	844	25.0	-31	True	ATTAAA	-16
PB.10707.1	chr7	-	1934	1	antisense	novelGene_ZNF655_AS_novelGene_AC005020.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-2710	False	NA	NA
PB.3138.6	chr13	-	2697	17	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	-18	-266	any annotated donor/acceptor	FALSE	canonical	1	12980	junction_15	9970.354331717605	NA	0	NA	TRUE	NA	NA	NA	B	coding	643	1932	560	2491	20.0	15	True	AATAAA	-16
PB.3138.7	chr13	-	1705	10	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	-89	33245	any annotated donor/acceptor	FALSE	canonical	1	12980	junction_8	10167.083772864491	NA	0	NA	TRUE	NA	NA	NA	B	coding	358	1074	631	1704	35.0	-26	False	NA	NA
PB.3138.4	chr13	-	2945	17	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	88745	-51	any annotated donor/acceptor	FALSE	canonical	1	965	junction_16	12582.384730248872	NA	1	1	TRUE	NA	NA	NA	B	coding	643	1932	593	2524	95.0	-45	False	ATTAAA	-32
PB.3138.5	chr13	-	2792	16	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	-42	-51	any annotated donor/acceptor	FALSE	canonical	1	1820	junction_13	13441.376074395557	NA	0	NA	TRUE	NA	NA	NA	B	coding	604	1815	557	2371	95.0	-9	True	ATTAAA	-32
PB.3138.2	chr13	-	2937	17	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	-42	-50	any annotated donor/acceptor	FALSE	canonical	1	12980	junction_15	9970.354331717605	NA	0	NA	TRUE	NA	NA	NA	B	coding	643	1932	584	2515	100.0	-9	True	ATTAAA	-33
PB.3138.3	chr13	-	2998	18	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	-45	-51	any annotated donor/acceptor	FALSE	canonical	1	1583	junction_15	14138.7474695222	NA	3	1	TRUE	NA	NA	NA	B	coding	643	1932	646	2577	95.0	-12	True	ATTAAA	-32
PB.11607.16	chr9	-	2519	8	full-splice_match	CARNMT1	ENST00000376834.7	4130	8	-24	1635	5	-1635	multi-exon	FALSE	canonical	1	91040	junction_5	23891.298567999736	NA	2	NA	TRUE	NA	NA	NA	C	coding	409	1230	178	1407	50.0	-4	True	ATTAAA	-17
PB.3138.1	chr13	-	3396	17	novel_not_in_catalog	ENOX1	novel	2982	17	NA	NA	-64	387	any annotated donor/acceptor	TRUE	canonical	1	12980	junction_15	9970.354331717605	NA	2	NA	TRUE	NA	NA	NA	B	coding	643	1932	606	2537	30.0	-1	True	AATAAA	-16
PB.1221.6	chr1	-	5893	20	full-splice_match	NID1	ENST00000264187.6	5864	20	-40	11	-40	-11	multi-exon	FALSE	canonical	1	165915	junction_9	94747.18815740167	NA	14	NA	TRUE	NA	NA	NA	C	coding	1247	3744	124	3867	50.0	-1	True	AATAAA	-9
PB.1109.7	chr1	+	4121	14	full-splice_match	DTL	ENST00000542077.5	4471	14	193	157	-100	-157	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	1	NA	TRUE	NA	NA	NA	C	coding	688	2067	146	2212	10.0	-47	True	AATAAA	-18
PB.11710.4	chr9	-	4061	16	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	15	-1	no_combination_of_known_junctions	FALSE	canonical	1	4900	junction_10	129928.92008964834	NA	0	NA	TRUE	NA	NA	NA	B	coding	836	2511	18	2528	95.0	-4	True	NA	NA
PB.11409.1	chr8	-	1938	3	full-splice_match	C8orf82	ENST00000524821.5	2476	3	51	487	11	-1	multi-exon	FALSE	canonical	1	402221	junction_2	24637.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	216	651	166	816	25.0	20	True	ATTAAA	-18
PB.6972.3	chr2	-	3212	5	novel_not_in_catalog	KLF7	novel	7954	4	NA	NA	-14	-8	any annotated donor/acceptor	FALSE	canonical	1	6864	junction_2	73346.7813506496	NA	10	2	TRUE	NA	NA	NA	C	coding	303	912	186	1097	90.0	-15	True	NA	NA
PB.11710.5	chr9	-	3933	16	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	14	-1	no_combination_of_known_junctions	FALSE	canonical	1	17989	junction_12	129063.81479655714	NA	1	NA	TRUE	NA	NA	NA	B	coding	793	2382	19	2400	95.0	-5	True	NA	NA
PB.12077.1	chrX	+	947	5	full-splice_match	PLP2	ENST00000376327.5	1079	5	-16	148	-16	-148	multi-exon	FALSE	canonical	1	2438011	junction_1	310411.53194308036	NA	0	NA	TRUE	NA	NA	NA	A	coding	152	459	92	550	50.0	2	True	AATAAA	-18
PB.2332.14	chr11	+	6267	46	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	29622	0	any annotated donor/acceptor	FALSE	canonical	1	1626	junction_1	112780.68073406679	NA	0	NA	TRUE	NA	NA	NA	C	coding	1972	5919	234	6152	90.0	-4	True	TTTAAA	-42
PB.2332.11	chr11	+	8340	49	novel_in_catalog	SORL1	novel	10904	48	NA	NA	-59	-24	combination_of_known_junctions	FALSE	canonical	1	1838	junction_48	115621.19071301505	NA	3	1	TRUE	NA	NA	NA	C	coding	2214	6645	12	6656	50.0	1	True	AATAAA	-15
PB.2332.10	chr11	+	2062	13	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	-60	-13929	any annotated donor/acceptor	FALSE	canonical	1	4975	junction_12	108137.35078628657	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	13	1752	15.0	0	True	NA	NA
PB.2332.12	chr11	+	6877	49	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	-50	0	any annotated donor/acceptor	FALSE	canonical	1	4220	junction_4	126518.93722613002	NA	6	NA	TRUE	NA	NA	NA	C	coding	2039	6120	643	6762	90.0	10	True	TTTAAA	-42
PB.3003.9	chr12	+	2845	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119039.8780339234	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	39	965	20.0	-7	True	AATAAA	-17
PB.3003.8	chr12	+	2829	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	-11	-141	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119039.8780339234	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	44	970	40.0	-12	False	AATAAA	-18
PB.5066.10	chr17	+	2682	2	novel_not_in_catalog	ITGB3	novel	3995	15	NA	NA	53	-30616	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-63	False	NA	NA
PB.5066.11	chr17	+	6007	15	novel_not_in_catalog	ITGB3	novel	3995	15	NA	NA	92	1919	any annotated donor/acceptor	FALSE	canonical	1	96	junction_1	47796.66419690856	NA	2	NA	TRUE	NA	NA	NA	C	coding	787	2364	113	2476	45.0	-24	False	ATTAAA	-11
PB.6524.2	chr2	-	5055	20	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	2	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	189035.48890391266	NA	2	NA	TRUE	NA	NA	NA	C	coding	681	2046	176	2221	25.0	3	True	AATAAA	-19
PB.6524.3	chr2	-	5169	20	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	-2	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	189035.48890391266	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	186	2231	30.0	-7	True	AATAAA	-18
PB.6524.1	chr2	-	3243	20	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	16	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	189035.48890391266	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	162	2207	25.0	-16	True	AATAAA	-19
PB.3003.1	chr12	+	3048	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	34	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119039.8780339234	NA	1	1	TRUE	NA	NA	NA	C	coding	308	927	88	1014	20.0	0	True	AATAAA	-17
PB.3003.3	chr12	+	2419	13	full-splice_match	GTF2H3	ENST00000543341.6	3329	13	-56	966	34	811	multi-exon	TRUE	canonical	1	221525	junction_1	80470.3711700341	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	88	1014	65.0	0	True	NA	NA
PB.3003.2	chr12	+	2935	13	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	34	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	147681.77903996728	NA	3	NA	TRUE	NA	NA	NA	C	coding	267	804	131	934	20.0	0	True	AATAAA	-16
PB.3003.5	chr12	+	2231	13	full-splice_match	GTF2H3	ENST00000543341.6	3329	13	-30	1128	-29	649	multi-exon	FALSE	canonical	1	221525	junction_1	80470.3711700341	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	62	988	65.0	-10	True	NA	NA
PB.3003.4	chr12	+	2077	13	full-splice_match	GTF2H3	ENST00000543341.6	3329	13	-39	1291	-38	486	multi-exon	FALSE	canonical	1	221525	junction_1	80470.3711700341	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	71	997	10.0	-39	False	ATTAAA	-45
PB.3003.7	chr12	+	2468	13	novel_in_catalog	GTF2H3	novel	3252	12	NA	NA	-18	811	combination_of_known_junctions	FALSE	canonical	1	16679	junction_9	120097.74958858744	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	51	782	65.0	1	True	NA	NA
PB.3003.6	chr12	+	2705	14	novel_not_in_catalog	GTF2H3	novel	3252	12	NA	NA	-18	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119039.8780339234	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	51	977	25.0	1	True	AATAAA	-15
PB.8698.6	chr4	-	3108	15	novel_not_in_catalog	WDR1	novel	3054	15	NA	NA	-23	-135	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	1075347.9158613868	NA	2	NA	TRUE	NA	NA	NA	C	coding	659	1980	226	2205	10.0	-20	True	ATTAAA	-21
PB.5743.1	chr19	-	2305	4	novel_in_catalog	ZNF442	novel	6219	6	NA	NA	-50	202	combination_of_known_junctions	FALSE	canonical	1	3488	junction_3	7272.3639592333075	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	123	1985	35.0	-29	False	AATAAA	-13
PB.5743.2	chr19	-	2152	3	full-splice_match	ZNF442	ENST00000438182.5	1906	3	-45	-201	-25	201	multi-exon	FALSE	canonical	1	9028	junction_2	5504.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	157	1833	30.0	-4	True	AATAAA	-12
PB.8698.2	chr4	-	2533	12	full-splice_match	WDR1	ENST00000382451.6	2722	12	191	-2	-31	1	multi-exon	FALSE	non_canonical	0	0	junction_6	1190474.210905466	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	93	1493	10.0	1	True	ATTAAA	-17
PB.8698.3	chr4	-	3018	15	full-splice_match	WDR1	ENST00000382452.6	3142	15	124	0	35	0	multi-exon	FALSE	non_canonical	0	0	junction_6	865407.6004475744	NA	20	2	TRUE	NA	NA	NA	C	coding	606	1821	160	1980	15.0	-1	True	ATTAAA	-15
PB.8698.1	chr4	-	3552	15	full-splice_match	WDR1	ENST00000382452.6	3142	15	95	-505	6	504	multi-exon	FALSE	non_canonical	0	0	junction_6	865407.6004475744	NA	2	NA	TRUE	NA	NA	NA	C	coding	606	1821	189	2009	35.0	17	True	ATTAAA	-11
PB.8524.10	chr3	+	4631	26	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	1	13538	junction_25	143681.99935804904	NA	1	NA	TRUE	NA	NA	NA	C	coding	927	2784	483	3266	25.0	-5	True	AATAAA	-13
PB.6972.4	chr2	-	3025	4	novel_in_catalog	KLF7	novel	7954	4	NA	NA	-12	-8	no_combination_of_known_junctions	FALSE	canonical	1	557	junction_3	72816.90499236195	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-4	True	NA	NA
PB.1109.1	chr1	+	4008	15	full-splice_match	DTL	ENST00000366991.4	4573	15	153	412	-116	0	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	162	2354	75.0	-63	True	NA	NA
PB.8698.8	chr4	-	2432	12	full-splice_match	WDR1	ENST00000382451.6	2722	12	155	135	66	-135	multi-exon	FALSE	non_canonical	0	0	junction_6	1190474.210905466	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	129	1529	10.0	4	True	ATTAAA	-21
PB.9997.1	chr6	+	2370	16	full-splice_match	KLC4	ENST00000347162.9	2404	16	34	0	-3	0	multi-exon	FALSE	canonical	1	61828	junction_1	68894.99569654292	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	84	1943	30.0	-3	True	AATAAA	-23
PB.9997.3	chr6	+	2611	16	full-splice_match	KLC4	ENST00000479388.5	2602	16	-3	-6	-3	0	multi-exon	FALSE	canonical	1	2633	junction_1	79583.01183114118	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	329	2188	15.0	-669	False	AATAAA	-19
PB.9997.2	chr6	+	3040	16	novel_in_catalog	KLC4	novel	3604	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	34896	junction_1	73583.04448215106	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	760	2619	15.0	-677	False	AATAAA	-17
PB.9997.4	chr6	+	3735	15	incomplete-splice_match	KLC4	ENST00000347162.9	2404	16	288	6	-1	0	5prime_fragment	FALSE	canonical	1	175448	junction_5	52757.954525737594	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	1455	3314	15.0	-667	False	AATAAA	-17
PB.8397.51	chr3	+	2952	23	incomplete-splice_match	ATP2C1	ENST00000504612.5	3148	26	8585	-24	8585	-1	5prime_fragment	FALSE	canonical	1	205333	junction_22	212219.5127528324	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	296	2491	25.0	-7005	False	ATTAAA	-30
PB.5760.1	chr19	-	1979	6	full-splice_match	DNASE2	ENST00000222219.7	1955	6	-23	-1	-23	1	multi-exon	TRUE	canonical	1	352665	junction_5	118436.29329660736	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	117	1199	20.0	-12	True	NA	NA
PB.6311.1	chr2	-	2127	12	full-splice_match	ODC1	ENST00000234111.8	2653	12	100	426	-95	207	multi-exon	FALSE	canonical	1	928091	junction_11	883226.0145829881	NA	28	4	TRUE	NA	NA	NA	C	coding	461	1386	412	1797	40.0	112	False	AATAAA	-9
PB.5760.3	chr19	-	1625	6	full-splice_match	DNASE2	ENST00000222219.7	1955	6	-12	342	-12	-342	multi-exon	FALSE	canonical	1	352665	junction_5	118436.29329660736	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	106	1188	20.0	-1	True	NA	NA
PB.5760.2	chr19	-	1768	6	full-splice_match	DNASE2	ENST00000222219.7	1955	6	-12	199	-12	-199	multi-exon	FALSE	canonical	1	352665	junction_5	118436.29329660736	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	106	1188	90.0	-1	True	NA	NA
PB.6311.4	chr2	-	1963	12	novel_in_catalog	ODC1	novel	2653	12	NA	NA	-21	217	combination_of_known_junctions	FALSE	canonical	1	53287	junction_9	1216496.4133764303	NA	4	1	TRUE	NA	NA	NA	C	coding	332	999	625	1623	15.0	-4	True	AATAAA	-19
PB.6311.5	chr2	-	2347	12	full-splice_match	ODC1	ENST00000405333.5	1943	12	-197	-207	-189	207	multi-exon	FALSE	canonical	1	1931	junction_11	1092295.7101476952	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	632	2017	40.0	34	True	AATAAA	-9
PB.623.3	chr1	+	4525	18	full-splice_match	LRIG2	ENST00000361127.5	11555	18	-30	7060	-30	203	multi-exon	FALSE	canonical	1	36721	junction_11	22808.59533484666	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	229	3426	30.0	-19	True	TTTAAA	-5
PB.6311.7	chr2	-	1831	11	incomplete-splice_match	ODC1	ENST00000234111.8	2653	12	111	1351	-84	-718	3prime_fragment	FALSE	canonical	1	928091	junction_10	800377.7767762484	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	401	1645	5.0	-1	True	AATATA	-15
PB.10268.1	chr6	+	2836	1	incomplete-splice_match	SASH1	ENST00000367467.7	7711	20	206612	10	21940	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-11
PB.11710.9	chr9	-	3017	17	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	1	217691	junction_16	98885.40376143741	NA	0	NA	TRUE	NA	NA	NA	B	coding	871	2616	38	2653	50.0	-24	True	TATAAA	-32
PB.808.5	chr1	+	1672	13	full-splice_match	DAP3	ENST00000343043.7	1649	13	-6	-17	-6	14	multi-exon	FALSE	canonical	1	247858	junction_1	388213.5987691641	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	175	1371	40.0	-14	True	AATAAA	-28
PB.9639.2	chr5	+	2331	7	full-splice_match	ZNF346	ENST00000358149.7	2314	7	0	-17	0	17	multi-exon	FALSE	canonical	1	139894	junction_4	39214.92828170019	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	44	928	25.0	0	True	NA	NA
PB.6272.1	chr19	+	739	6	full-splice_match	RPS5	ENST00000196551.7	740	6	1	0	1	0	multi-exon	FALSE	canonical	1	5471805	junction_3	3313003.1198218088	NA	0	NA	TRUE	NA	NA	NA	A	coding	204	615	72	686	5.0	1	True	AATAAA	-30
PB.9639.1	chr5	+	3075	7	full-splice_match	ZNF346	ENST00000358149.7	2314	7	-4	-757	-4	757	multi-exon	FALSE	canonical	1	139894	junction_4	39214.92828170019	NA	2	NA	TRUE	NA	NA	NA	C	coding	294	885	48	932	85.0	-4	True	NA	NA
PB.9639.4	chr5	+	2723	8	novel_in_catalog	ZNF346	novel	1276	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	10456	junction_7	69195.44270914297	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	29	913	80.0	15	True	AATAAA	-9
PB.3421.4	chr14	-	2042	4	incomplete-splice_match	VCPKMT	ENST00000484763.1	1849	5	-22	-3	20	3	intron_retention	FALSE	canonical	1	16531	junction_2	11489.32609956834	NA	0	NA	TRUE	NA	NA	NA	C	coding	89	270	29	298	20.0	-16	True	AATAAA	-13
PB.3421.1	chr14	-	1778	6	full-splice_match	VCPKMT	ENST00000395860.6	1761	6	-15	-2	-14	1	multi-exon	FALSE	canonical	1	16531	junction_2	16055.171149508185	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	21	710	40.0	-8	True	AATAAA	-21
PB.3421.3	chr14	-	1766	6	full-splice_match	VCPKMT	ENST00000491402.5	1793	6	24	3	-18	-3	multi-exon	FALSE	canonical	1	16531	junction_2	19548.179471244886	NA	1	1	TRUE	NA	NA	NA	C	coding	144	435	25	459	20.0	-12	True	AATAAA	-16
PB.3421.2	chr14	-	1663	5	novel_not_in_catalog	VCPKMT	novel	1827	5	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	23351.408152132924	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	14	457	35.0	-1	True	AATAAA	-20
PB.8532.5	chr3	+	4316	9	incomplete-splice_match	MFN1	ENST00000357390.8	3148	17	-6	21670	-6	3857	3prime_fragment	FALSE	canonical	1	71715	junction_5	104266.176977409	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	90	1079	70.0	-6	True	NA	NA
PB.8532.4	chr3	+	3477	18	full-splice_match	MFN1	ENST00000471841.5	5224	18	34	1713	-9	193	multi-exon	FALSE	canonical	1	71715	junction_5	97209.49252108876	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	93	2318	60.0	-9	True	NA	NA
PB.8532.7	chr3	+	2539	18	full-splice_match	MFN1	ENST00000471841.5	5224	18	37	2648	-6	-213	multi-exon	FALSE	canonical	1	71715	junction_5	97209.49252108876	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	90	2315	45.0	-6	True	AGTAAA	-19
PB.8698.7	chr4	-	2819	15	full-splice_match	WDR1	ENST00000382452.6	3142	15	188	135	-34	-135	multi-exon	FALSE	non_canonical	0	0	junction_6	865407.6004475744	NA	3	1	TRUE	NA	NA	NA	C	coding	606	1821	96	1916	10.0	-2	True	ATTAAA	-21
PB.3992.4	chr15	-	5272	22	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	1	6940	junction_21	121783.42887699684	NA	2	NA	TRUE	NA	NA	NA	C	coding	1273	3822	404	4225	40.0	-5	True	AATAAA	-24
PB.8532.6	chr3	+	3212	18	full-splice_match	MFN1	ENST00000471841.5	5224	18	43	1969	0	-63	multi-exon	FALSE	canonical	1	71715	junction_5	97209.49252108876	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	84	2309	35.0	0	True	ATTAAA	-25
PB.6490.1	chr2	+	1739	1	intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-600	False	NA	NA
PB.8532.1	chr3	+	5214	18	full-splice_match	MFN1	ENST00000471841.5	5224	18	14	-4	14	4	multi-exon	FALSE	canonical	1	71715	junction_5	97209.49252108876	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2226	113	2338	40.0	-29	True	AATAAA	-21
PB.4377.2	chr16	-	2223	3	full-splice_match	ZNF689	ENST00000565710.1	602	3	46	-1667	46	-822	multi-exon	FALSE	canonical	1	1126	junction_2	40449.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	2	1339	80.0	600	False	TATAAA	-14
PB.4377.3	chr16	-	2716	3	full-splice_match	ZNF689	ENST00000287461.7	3547	3	8	823	8	-823	multi-exon	FALSE	canonical	1	80525	junction_2	750.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	331	1833	85.0	11	True	TATAAA	-13
PB.10508.3	chr7	+	2965	3	full-splice_match	MRPL32	ENST00000432845.1	2734	3	-6	-225	-6	-5	multi-exon	FALSE	canonical	1	69301	junction_2	168483.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	107	324	18	341	25.0	-7	True	NA	NA
PB.4377.1	chr16	-	3558	3	full-splice_match	ZNF689	ENST00000287461.7	3547	3	-13	2	-6	-2	multi-exon	FALSE	canonical	1	80525	junction_2	750.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	352	1854	20.0	-10	True	ATTAAA	-15
PB.11090.1	chr8	-	898	4	full-splice_match	LSM1	ENST00000311351.8	1147	4	234	15	6	-1	multi-exon	FALSE	canonical	1	626733	junction_3	69369.96026779572	NA	1	NA	TRUE	NA	NA	NA	A	coding	133	402	163	564	20.0	10	True	AATAAA	-19
PB.8532.3	chr3	+	3349	17	novel_not_in_catalog	MFN1	novel	5224	18	NA	NA	-11	193	any annotated donor/acceptor	FALSE	canonical	1	2351	junction_10	115168.86282046625	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	92	1204	60.0	-11	True	NA	NA
PB.11700.4	chr9	+	3747	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-15	-5588	intron_retention	FALSE	canonical	1	152	junction_1	182976.76631269336	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	346	2373	100.0	-44	True	AATACA	-11
PB.9987.2	chr6	+	2353	8	novel_not_in_catalog	BYSL	novel	2029	7	NA	NA	-31	1337	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	158853.63089103534	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	65	1378	10.0	0	True	NA	NA
PB.9987.1	chr6	+	1716	7	full-splice_match	BYSL	ENST00000230340.8	2029	7	311	2	-31	-2	multi-exon	TRUE	canonical	1	324269	junction_2	73891.89952220744	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	65	1378	15.0	0	True	GATAAA	-22
PB.6320.7	chr2	+	3374	3	full-splice_match	TRIB2	ENST00000155926.8	4391	3	1012	5	-337	-5	multi-exon	FALSE	canonical	1	290981	junction_2	14270.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	343	1032	408	1439	35.0	-385	False	AATAAA	-17
PB.10668.4	chr7	-	3281	18	novel_not_in_catalog	AC000120.3	novel	2642	18	NA	NA	10	-68234	intron_retention	FALSE	non_canonical	0	0	junction_1	92855.46416941572	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	491	2701	45.0	-1	True	AATAAA	-29
PB.11141.4	chr8	-	3545	1	incomplete-splice_match	IMPAD1	ENST00000262644.8	7199	5	32362	5	18630	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	2450	False	AATAAA	-12
PB.8584.1	chr3	+	2461	2	full-splice_match	LINC02051	ENST00000456535.1	690	2	-230	-1541	-230	1541	multi-exon	FALSE	canonical	1	8010	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	0	True	NA	NA
PB.452.1	chr1	+	2132	11	full-splice_match	PGM1	ENST00000371084.7	2472	11	338	2	-195	2	multi-exon	FALSE	canonical	1	509008	junction_4	156580.259564097	NA	2	NA	TRUE	NA	NA	NA	A	coding	496	1491	74	1564	10.0	-69	False	AATAAA	-15
PB.11221.13	chr8	+	4159	17	full-splice_match	CPNE3	ENST00000517490.5	4865	17	32	674	0	-587	multi-exon	FALSE	canonical	1	315722	junction_2	88733.99168756352	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	132	1745	20.0	21	True	ATTAAA	-27
PB.11700.3	chr9	+	4774	17	novel_in_catalog	SLC44A1	novel	9640	16	NA	NA	-15	-4619	intron_retention	FALSE	canonical	1	7143	junction_2	191155.0316216587	NA	4	NA	TRUE	NA	NA	NA	C	coding	624	1875	557	2431	40.0	-44	True	AATAAA	-13
PB.11221.11	chr8	+	3528	17	full-splice_match	CPNE3	ENST00000517490.5	4865	17	10	1327	0	-1240	multi-exon	FALSE	canonical	1	315722	junction_2	88733.99168756352	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	154	1767	60.0	-1	True	AATAGA	-27
PB.11221.10	chr8	+	4877	18	novel_not_in_catalog	CPNE3	novel	4865	17	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	20	junction_1	218665.2234263372	NA	10	2	TRUE	NA	NA	NA	C	coding	537	1614	264	1877	20.0	-1	True	GATAAA	-15
PB.11182.5	chr8	+	2882	9	full-splice_match	TERF1	ENST00000276602.10	3268	9	12	374	-1	-374	multi-exon	FALSE	canonical	1	28382	junction_2	34182.55496594718	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	12	1271	20.0	12	True	TATAAA	-23
PB.11700.2	chr9	+	3567	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-48	-5588	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	165285.1754305551	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	296	2269	100.0	-1817	False	AATACA	-11
PB.561.22	chr1	+	2585	13	novel_not_in_catalog	AC118553.2	novel	3175	20	NA	NA	68024	-56	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	186417.10889164876	NA	0	NA	TRUE	NA	NA	NA	B	coding	490	1473	86	1558	15.0	10	True	TATAAA	-15
PB.1314.1	chr10	-	3721	8	full-splice_match	RSU1	ENST00000602389.1	3639	8	-76	-6	-2	-3	multi-exon	FALSE	canonical	1	219300	junction_7	297266.2559879645	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	267	941	30.0	6	False	ATTAAA	-21
PB.1314.2	chr10	-	3703	9	full-splice_match	RSU1	ENST00000345264.9	3834	9	122	9	7	0	multi-exon	FALSE	canonical	1	863611	junction_7	85746.36977146249	NA	4	NA	TRUE	NA	NA	NA	C	coding	277	834	96	929	45.0	-1	True	ATTAAA	-15
PB.1314.3	chr10	-	2252	9	full-splice_match	RSU1	ENST00000345264.9	3834	9	112	1470	-3	1072	multi-exon	FALSE	canonical	1	863611	junction_7	85746.36977146249	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	106	939	75.0	-11	True	NA	NA
PB.1314.5	chr10	-	1999	9	full-splice_match	RSU1	ENST00000345264.9	3834	9	84	1751	10	791	multi-exon	FALSE	canonical	1	863611	junction_7	85746.36977146249	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	134	967	65.0	6	True	NA	NA
PB.1314.6	chr10	-	1510	8	full-splice_match	RSU1	ENST00000377911.1	955	8	12	-567	3	407	multi-exon	FALSE	canonical	1	219300	junction_7	297266.2559879645	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	188	862	30.0	-1	True	ATTAAA	-20
PB.1314.7	chr10	-	1430	9	full-splice_match	RSU1	ENST00000345264.9	3834	9	106	2298	-9	244	multi-exon	FALSE	canonical	1	863611	junction_7	85746.36977146249	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	112	945	30.0	-17	True	AATAAA	-19
PB.1314.9	chr10	-	2257	8	novel_not_in_catalog	RSU1	novel	3919	8	NA	NA	-9	-157567	any annotated donor/acceptor	FALSE	canonical	1	1301	junction_1	366205.9782525653	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	112	723	90.0	-17	True	NA	NA
PB.8463.5	chr3	+	3083	11	novel_not_in_catalog	RNF13	novel	2843	10	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	1308	junction_1	150593.738975729	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	916	2061	35.0	-49	True	AATAAA	-16
PB.6476.18	chr2	-	4415	17	full-splice_match	PPP4R3B	ENST00000616407.1	4385	17	-28	-2	-2	1	multi-exon	FALSE	canonical	1	146496	junction_8	100630.56562013026	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	332	2881	15.0	-13	True	ATTAAA	-21
PB.6476.19	chr2	-	4266	16	full-splice_match	PPP4R3B	ENST00000616288.4	4310	16	8	36	8	-35	multi-exon	FALSE	canonical	1	188789	junction_7	86824.2422797279	NA	1	NA	TRUE	NA	NA	NA	C	coding	817	2454	316	2769	55.0	3	True	NA	NA
PB.6476.11	chr2	-	5181	15	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-2	-23	no_combination_of_known_junctions	FALSE	canonical	1	3459	junction_1	133781.16973527998	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	326	2524	60.0	-7	True	TATAAA	-11
PB.6476.12	chr2	-	4518	17	full-splice_match	PPP4R3B	ENST00000616407.1	4385	17	-19	-114	1	113	multi-exon	FALSE	canonical	1	146496	junction_8	100630.56562013026	NA	2	NA	TRUE	NA	NA	NA	C	coding	849	2550	323	2872	35.0	-4	True	AATAAA	-23
PB.6476.13	chr2	-	4439	16	full-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-16	-113	-10	113	multi-exon	FALSE	canonical	1	188789	junction_7	86824.2422797279	NA	1	NA	TRUE	NA	NA	NA	C	coding	817	2454	340	2793	35.0	-21	True	AATAAA	-23
PB.6476.14	chr2	-	4400	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-8	1	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_3	118462.84131585313	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	338	2866	15.0	-19	True	ATTAAA	-21
PB.8463.8	chr3	+	2164	11	novel_in_catalog	RNF13	novel	2843	10	NA	NA	6	-20	combination_of_known_junctions	FALSE	canonical	1	24313	junction_1	152954.13522180432	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	1372	1914	90.0	-25	True	AATGAA	-10
PB.6476.17	chr2	-	3820	16	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-30	2	no_combination_of_known_junctions	FALSE	canonical	1	41591	junction_13	137734.47898920104	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	360	2285	10.0	2	True	ATTAAA	-22
PB.888.8	chr1	+	3037	17	novel_in_catalog	DDR2	novel	2998	18	NA	NA	-19	26	no_combination_of_known_junctions	FALSE	canonical	1	2469	junction_2	55945.720981890954	NA	1	NA	TRUE	NA	NA	NA	C	coding	820	2463	374	2836	80.0	0	True	ATTAAA	-6
PB.9357.28	chr5	+	3739	2	incomplete-splice_match	LNPEP	ENST00000231368.9	12752	18	616	54734	616	-15303	3prime_fragment	FALSE	canonical	1	146006	junction_1	0.0	NA	6	1	TRUE	NA	NA	NA	C	coding	287	864	77	940	80.0	0	True	NA	NA
PB.9357.29	chr5	+	4498	18	full-splice_match	LNPEP	ENST00000231368.9	12752	18	518	7736	518	743	multi-exon	FALSE	canonical	1	122352	junction_7	34977.82487940206	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3078	175	3252	70.0	-98	False	CATAAA	-12
PB.6918.12	chr2	-	2784	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	2	1496	2	51	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	89	2749	15.0	-46	True	TATAAA	-35
PB.7863.3	chr22	-	2522	4	novel_not_in_catalog	CDPF1	novel	1439	3	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	2218	junction_3	22738.697123821516	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	1070	1441	30.0	-29	False	AATAAA	-24
PB.7863.2	chr22	-	2349	4	novel_not_in_catalog	CDPF1	novel	1439	3	NA	NA	6	1	any annotated donor/acceptor	FALSE	canonical	1	4075	junction_3	21870.716637143425	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	896	1267	30.0	9	True	AATAAA	-25
PB.7863.1	chr22	-	1492	4	full-splice_match	CDPF1	ENST00000314567.7	1875	4	386	-3	1	1	multi-exon	FALSE	canonical	1	17595	junction_3	15576.37861207369	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	39	410	30.0	-1	True	AATAAA	-25
PB.9357.26	chr5	+	3656	18	full-splice_match	LNPEP	ENST00000231368.9	12752	18	616	8480	616	-1	multi-exon	FALSE	canonical	1	122352	junction_7	34977.82487940206	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3078	77	3154	25.0	0	True	AATAAA	-20
PB.9357.27	chr5	+	6500	18	full-splice_match	LNPEP	ENST00000231368.9	12752	18	619	5633	619	2846	multi-exon	FALSE	canonical	1	122352	junction_7	34977.82487940206	NA	3	NA	TRUE	NA	NA	NA	C	coding	1025	3078	74	3151	90.0	3	True	NA	NA
PB.9357.24	chr5	+	6494	18	novel_not_in_catalog	LNPEP	novel	2075	2	NA	NA	-3609	2846	any annotated donor/acceptor	FALSE	canonical	1	4479	junction_1	55552.30981260428	NA	1	NA	TRUE	NA	NA	NA	C	coding	1011	3036	110	3145	90.0	1	True	NA	NA
PB.7863.4	chr22	-	2138	4	novel_not_in_catalog	CDPF1	novel	1439	3	NA	NA	20	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	23776.125434281057	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	699	1070	20.0	23	True	AATAAA	-11
PB.1322.4	chr10	-	1865	11	full-splice_match	NSUN6	ENST00000377304.6	2201	11	3	333	3	168	multi-exon	FALSE	canonical	1	119287	junction_9	17079.76235900254	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	417	1826	0.0	-36	True	AATGAA	-14
PB.1322.3	chr10	-	2048	10	novel_in_catalog	AL450384.2	novel	1028	5	NA	NA	-105975	-3976	no_combination_of_known_junctions	FALSE	canonical	1	2856	junction_9	48125.851755681964	NA	2	NA	TRUE	NA	NA	NA	B	coding	417	1254	424	1677	30.0	-43	True	AATAAA	-14
PB.1322.2	chr10	-	1988	9	novel_in_catalog	AL450384.2	novel	1028	5	NA	NA	-105987	-3968	no_combination_of_known_junctions	FALSE	canonical	1	5167	junction_8	50256.42333759437	NA	3	NA	TRUE	NA	NA	NA	B	coding	328	987	623	1609	25.0	-55	True	AATAAA	-22
PB.1322.1	chr10	-	2202	11	full-splice_match	NSUN6	ENST00000377304.6	2201	11	7	-8	7	8	multi-exon	FALSE	canonical	1	119287	junction_9	17079.76235900254	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	413	1822	20.0	-32	True	AATAAA	-23
PB.6320.2	chr2	+	2775	3	full-splice_match	TRIB2	ENST00000381465.2	2778	3	-1	4	-1	-4	multi-exon	FALSE	canonical	1	2346	junction_1	144317.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	216	839	40.0	-8	True	AATAAA	-18
PB.10668.1	chr7	-	4404	19	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	4	-67645	intron_retention	FALSE	canonical	1	3867	junction_18	89711.92972481763	NA	3	NA	TRUE	NA	NA	NA	B	coding	736	2211	877	3087	50.0	-7	True	AATAAA	-13
PB.7922.1	chr3	-	1928	9	full-splice_match	TADA3	ENST00000301964.6	2355	9	314	113	-25	-6	multi-exon	FALSE	canonical	1	681145	junction_3	147412.35476795823	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	246	1544	40.0	39	True	AATAAA	-21
PB.2503.2	chr12	+	1693	8	full-splice_match	CMAS	ENST00000229329.6	1787	8	101	-7	-12	-4	multi-exon	FALSE	canonical	1	399171	junction_1	128910.551771057	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	30	1334	25.0	1	True	AATAAA	-23
PB.2503.1	chr12	+	3713	1	novel_in_catalog	CMAS	novel	1787	8	NA	NA	18	-11002	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	158	477	113	589	80.0	-26	True	NA	NA
PB.379.26	chr1	-	3260	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	37	-306	combination_of_known_junctions	FALSE	canonical	1	24395	junction_11	228949.86950465458	NA	6	1	TRUE	NA	NA	NA	C	coding	474	1425	1192	2616	45.0	-16	True	TATAAA	-16
PB.6780.3	chr2	+	6099	30	incomplete-splice_match	RIF1	ENST00000428287.6	7722	35	13	9820	-1	-9820	3prime_fragment	FALSE	canonical	1	25057	junction_1	58612.724805070364	NA	0	NA	TRUE	NA	NA	NA	C	coding	2016	6048	52	6099	70.0	-3	True	AAGAAA	-9
PB.2769.35	chr12	-	3115	1	novel_in_catalog	PHLDA1	novel	5913	2	NA	NA	-33	-3076	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	C	coding	260	783	320	1102	20.0	920	False	AATAAA	-16
PB.11584.4	chr9	+	3817	3	full-splice_match	CBWD5	ENST00000377384.5	1347	3	-4	-2466	-4	1701	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	113	342	107	448	100.0	NA	False	NA	NA
PB.10123.1	chr6	+	2079	2	full-splice_match	AL513550.1	ENST00000418945.1	1638	2	507	-948	507	948	multi-exon	FALSE	canonical	1	30782	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	105	318	1093	1410	30.0	-293	False	NA	NA
PB.2769.34	chr12	-	2398	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-3075	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	304	801	20.0	-1	True	AATAAA	-17
PB.760.1	chr1	+	1385	1	novel_in_catalog	LOR	novel	1230	2	NA	NA	1035	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	312	939	216	1154	30.0	1048	False	AATAAA	-14
PB.2769.33	chr12	-	2631	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	3101	9	-3101	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	70.0	-1	True	TTTAAA	-42
PB.5832.1	chr19	-	2085	11	novel_in_catalog	IL12RB1	novel	2782	17	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	1	2785	junction_10	16751.403744462732	NA	0	NA	TRUE	NA	NA	NA	A	coding	421	1266	172	1437	35.0	-10	False	NA	NA
PB.6476.28	chr2	-	4446	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	1177	junction_1	134649.20885298352	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	340	2853	20.0	-21	True	ATTAAA	-19
PB.6780.7	chr2	+	3148	25	incomplete-splice_match	RIF1	ENST00000430328.6	7992	34	220	15310	220	4968	3prime_fragment	FALSE	canonical	1	108790	junction_2	42006.97165581814	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3033	115	3147	80.0	149	False	AAAAAG	-18
PB.2849.4	chr12	+	3160	10	full-splice_match	TDG	ENST00000392872.7	3251	10	89	2	7	-2	multi-exon	FALSE	canonical	1	157	junction_2	61825.96776975405	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	146	1378	20.0	-10	True	AATAAA	-24
PB.2849.5	chr12	+	2547	10	full-splice_match	TDG	ENST00000392872.7	3251	10	38	666	0	-666	multi-exon	FALSE	canonical	1	157	junction_2	61825.96776975405	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	197	1429	35.0	0	True	ATTAAA	-11
PB.2849.6	chr12	+	2902	10	full-splice_match	TDG	ENST00000392872.7	3251	10	40	309	-1	-309	multi-exon	FALSE	canonical	1	157	junction_2	61825.96776975405	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	195	1427	35.0	2	True	ATTAAA	-16
PB.2849.7	chr12	+	3177	9	novel_in_catalog	TDG	novel	3251	10	NA	NA	0	-109	intron_retention	FALSE	canonical	1	157	junction_2	64505.690641286645	NA	2	NA	TRUE	NA	NA	NA	C	coding	237	714	194	907	30.0	3	True	AGTAAA	-16
PB.7350.6	chr20	+	1565	6	full-splice_match	RNF114	ENST00000244061.5	2503	6	50	888	-1	105	multi-exon	FALSE	canonical	1	643964	junction_1	300850.48777597153	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	16	702	50.0	-1	True	NA	NA
PB.2849.1	chr12	+	3058	9	novel_in_catalog	TDG	novel	3251	10	NA	NA	2	-108	combination_of_known_junctions	FALSE	canonical	1	157	junction_2	67640.75796394878	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	233	856	30.0	-7	True	AGTAAA	-17
PB.2849.2	chr12	+	3012	9	full-splice_match	TDG	ENST00000544861.5	1387	9	0	-1625	0	-55	multi-exon	FALSE	canonical	1	11559	junction_2	62816.16017743762	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	480	1283	25.0	3	True	ATTAAA	-25
PB.2849.3	chr12	+	3441	8	novel_in_catalog	TDG	novel	3251	10	NA	NA	2	-3	intron_retention	FALSE	canonical	1	157	junction_2	68916.43982359495	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	151	768	20.0	-15	True	AATAAA	-23
PB.7350.8	chr20	+	3355	1	novel_in_catalog	RNF114	novel	624	5	NA	NA	-1	-2219	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.6780.5	chr2	+	3176	26	incomplete-splice_match	RIF1	ENST00000444746.6	7897	36	19	15310	2	4968	3prime_fragment	FALSE	canonical	1	33839	junction_1	50400.5383911561	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3033	143	3175	80.0	0	True	AAAAAG	-18
PB.2849.8	chr12	+	3428	10	full-splice_match	TDG	ENST00000392872.7	3251	10	56	-233	15	233	multi-exon	FALSE	canonical	1	157	junction_2	61825.96776975405	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	179	1411	40.0	-43	False	AATACA	-14
PB.2849.9	chr12	+	4154	10	full-splice_match	TDG	ENST00000392872.7	3251	10	68	-971	-14	971	multi-exon	FALSE	canonical	1	157	junction_2	61825.96776975405	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	167	1399	50.0	-31	True	AATAGA	-22
PB.1638.1	chr10	+	2240	9	incomplete-splice_match	SLK	ENST00000335753.8	7673	18	652	25708	652	-15591	3prime_fragment	FALSE	canonical	1	303463	junction_6	47640.101633891376	NA	0	NA	TRUE	NA	NA	NA	B	coding	706	2118	122	2239	40.0	684	False	AGTAAA	-29
PB.99.6	chr1	+	2837	18	incomplete-splice_match	PLOD1	ENST00000196061.4	2940	19	13222	1	-6326	0	5prime_fragment	FALSE	canonical	1	807692	junction_9	232436.18405794454	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	592	2109	35.0	-8993	False	ATTAAA	-14
PB.2680.7	chr12	-	4401	23	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	124606.8239016691	NA	2	NA	TRUE	NA	NA	NA	B	coding	393	1182	1431	2612	25.0	-4	True	AATAAA	-17
PB.2680.6	chr12	-	4677	23	novel_in_catalog	STAT2	novel	3278	11	NA	NA	-6	-3	intron_retention	FALSE	canonical	1	366512	junction_17	76078.59955413065	NA	1	NA	TRUE	NA	NA	NA	B	coding	393	1182	1707	2888	25.0	-1	True	AATAAA	-17
PB.2680.5	chr12	-	4664	23	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	155345.14066592	NA	3	NA	TRUE	NA	NA	NA	B	coding	377	1134	77	1210	25.0	-20	True	AATAAA	-17
PB.2680.4	chr12	-	4722	22	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	123508.0865377738	NA	3	NA	TRUE	NA	NA	NA	B	coding	377	1134	89	1222	25.0	2718	False	AATAAA	-17
PB.2680.9	chr12	-	4371	22	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-24	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	159671.3614389528	NA	3	NA	TRUE	NA	NA	NA	B	coding	377	1134	130	1263	25.0	2677	False	AATAAA	-17
PB.2680.8	chr12	-	4411	23	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	146627.52756791527	NA	4	NA	TRUE	NA	NA	NA	B	coding	393	1182	1441	2622	25.0	-26	True	AATAAA	-17
PB.4437.8	chr16	-	3165	15	novel_not_in_catalog	AMFR	novel	3600	14	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	261833.03752793904	NA	1	NA	TRUE	NA	NA	NA	B	coding	548	1647	170	1816	35.0	10	True	AATAAA	-22
PB.11141.5	chr8	-	5395	1	incomplete-splice_match	IMPAD1	ENST00000262644.8	7199	5	30513	4	16781	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	B	coding	163	492	1385	1876	35.0	601	False	AATAAA	-13
PB.2238.2	chr11	-	4762	18	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	6624	junction_14	149295.86881383858	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	639	2354	35.0	-3	True	AATAAA	-16
PB.11441.1	chr9	+	2565	1	genic	PDCD1LG2	novel	NA	NA	NA	NA	-61	-58181	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-22	True	NA	NA
PB.2238.3	chr11	-	4687	17	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	28052	junction_14	140559.83874513584	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	564	2279	35.0	-1	True	AATAAA	-16
PB.279.9	chr1	-	3886	20	novel_not_in_catalog	KIAA0319L	novel	4789	21	NA	NA	16433	0	any annotated donor/acceptor	FALSE	canonical	1	2077	junction_19	99486.87600358606	NA	0	NA	TRUE	NA	NA	NA	C	coding	1029	3090	8	3097	100.0	NA	False	NA	NA
PB.6654.9	chr2	-	3415	20	incomplete-splice_match	REV1	ENST00000258428.7	4751	23	18	2594	18	-13	3prime_fragment	FALSE	canonical	1	53210	junction_12	65725.91653706413	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3204	212	3415	80.0	-18	True	NA	NA
PB.1187.7	chr1	-	4013	26	novel_not_in_catalog	NUP133	novel	5207	26	NA	NA	282	473	any annotated donor/acceptor	FALSE	canonical	1	1019	junction_25	97775.54323689744	NA	0	NA	TRUE	NA	NA	NA	C	coding	1109	3330	86	3415	40.0	282	False	AATAAA	-10
PB.1323.14	chr10	+	2148	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	26	5022	26	-5022	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	208	747	35.0	0	True	GATAAA	-15
PB.323.9	chr1	-	3073	25	novel_in_catalog	COL9A2	novel	2862	32	NA	NA	2807	-49	intron_retention	FALSE	canonical	1	152974	junction_24	37417.650785290236	NA	0	NA	TRUE	NA	NA	NA	B	coding	251	756	263	1018	40.0	1	True	AATAAA	-15
PB.2238.1	chr11	-	4374	15	full-splice_match	MTMR2	ENST00000346299.9	4681	15	307	0	108	0	multi-exon	FALSE	canonical	1	101789	junction_14	97265.74303026525	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	35	1966	35.0	41	True	AATAAA	-16
PB.1323.10	chr10	+	7117	5	novel_in_catalog	ARL5B	novel	7196	6	NA	NA	-9	-4	no_combination_of_known_junctions	FALSE	canonical	1	12148	junction_3	84231.39103201074	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	243	698	40.0	-35	True	AATAAA	-14
PB.1323.11	chr10	+	4543	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-7	2660	-7	-2660	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	241	780	55.0	-33	True	TTTAAA	-24
PB.1323.12	chr10	+	3683	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	78	3435	78	-3435	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	156	695	15.0	-76	False	ATTAAA	-20
PB.1323.13	chr10	+	4025	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	26	3145	26	-3145	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	208	747	40.0	0	True	AATATA	-12
PB.8813.3	chr4	+	7056	7	novel_not_in_catalog	MOB1B	novel	760	6	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	canonical	1	833	junction_2	70679.91404446763	NA	16	2	TRUE	NA	NA	NA	C	coding	247	744	204	947	25.0	0	True	AATAAA	-19
PB.2238.6	chr11	-	4565	16	full-splice_match	MTMR2	ENST00000352297.11	3350	16	-8	-1207	-1	0	multi-exon	FALSE	canonical	1	112648	junction_15	107291.31383597132	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	442	2157	35.0	-2	True	AATAAA	-16
PB.8813.1	chr4	+	6886	6	full-splice_match	MOB1B	ENST00000309395.6	6963	6	75	2	27	-2	multi-exon	FALSE	canonical	1	78627	junction_1	29166.36273792123	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	127	777	25.0	-65	False	AATAAA	-19
PB.9281.4	chr5	+	3137	10	incomplete-splice_match	BDP1	ENST00000508917.6	7194	32	54124	13088	-12983	-13088	internal_fragment	FALSE	canonical	1	116653	junction_1	19622.890856231035	NA	0	NA	TRUE	NA	NA	NA	B	coding	944	2832	305	3136	70.0	-9045	False	NA	NA
PB.323.4	chr1	-	2750	31	novel_in_catalog	COL9A2	novel	2862	32	NA	NA	28	-38	combination_of_known_junctions	FALSE	canonical	1	19784	junction_30	61524.35771053067	NA	0	NA	TRUE	NA	NA	NA	B	coding	595	1788	306	2093	25.0	-13	True	AATAAA	-26
PB.2513.1	chr12	+	5287	4	incomplete-splice_match	RASSF8	ENST00000282884.13	1994	5	2801	-3855	129	-3	5prime_fragment	FALSE	canonical	1	178556	junction_1	25327.066711765543	NA	1	NA	TRUE	NA	NA	NA	A	coding	280	843	397	1239	20.0	2801	False	AATAAA	-19
PB.323.6	chr1	-	2564	28	novel_not_in_catalog	COL9A2	novel	2862	32	NA	NA	2805	-40	any annotated donor/acceptor	FALSE	canonical	1	3485	junction_14	70489.49714016054	NA	1	1	TRUE	NA	NA	NA	B	coding	306	921	989	1909	30.0	-1	True	AATAAA	-24
PB.8813.4	chr4	+	5439	6	full-splice_match	MOB1B	ENST00000309395.6	6963	6	52	1472	4	-1472	multi-exon	FALSE	canonical	1	78627	junction_1	29166.36273792123	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	150	800	30.0	-4	True	ATTAAA	-12
PB.210.3	chr1	+	2187	14	novel_in_catalog	SYTL1	novel	1712	14	NA	NA	2	-1	intron_retention	FALSE	canonical	1	222707	junction_12	74975.41227873885	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	223	1077	30.0	-29	True	AATAAA	-15
PB.7855.27	chr22	+	2127	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	5	108	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	51043.50604738447	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	438	1844	35.0	53	False	ATTAAA	-21
PB.210.1	chr1	+	2956	11	novel_in_catalog	SYTL1	novel	1712	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	222707	junction_9	79384.54476162221	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	225	1232	30.0	-31	True	AATAAA	-16
PB.9877.1	chr6	+	921	7	full-splice_match	CSNK2B	ENST00000375882.6	948	7	22	5	-1	-5	multi-exon	FALSE	canonical	1	1822031	junction_1	864094.2117935631	NA	0	NA	TRUE	NA	NA	NA	A	coding	215	648	135	782	15.0	-1	True	AATAAA	-15
PB.2238.4	chr11	-	4642	17	full-splice_match	MTMR2	ENST00000409459.5	3420	17	-16	-1206	-5	0	multi-exon	FALSE	canonical	1	56216	junction_13	134962.82741578328	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	519	2234	35.0	-6	True	AATAAA	-16
PB.7855.26	chr22	+	4879	8	novel_not_in_catalog	NUP50	novel	5233	8	NA	NA	5	-597	any annotated donor/acceptor	FALSE	canonical	1	2188	junction_7	51812.93784768591	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	316	1539	90.0	53	False	NA	NA
PB.6824.1	chr2	-	2658	2	novel_not_in_catalog	CCDC173	novel	2181	9	NA	NA	12	-11515	any annotated donor/acceptor	FALSE	canonical	1	19166	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	218	657	1055	1711	20.0	-31	True	NA	NA
PB.2238.5	chr11	-	4618	16	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	28052	junction_14	138399.09340830235	NA	2	NA	TRUE	NA	NA	NA	C	coding	571	1716	495	2210	35.0	-3	True	AATAAA	-16
PB.7855.25	chr22	+	5201	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	51043.50604738447	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	443	1849	35.0	48	False	AATAAA	-13
PB.6737.4	chr2	-	3655	19	full-splice_match	SMPD4	ENST00000351288.10	3661	19	5	1	0	0	multi-exon	FALSE	canonical	1	95943	junction_9	160264.17459809297	NA	2	NA	TRUE	NA	NA	NA	C	coding	798	2397	113	2509	10.0	-1	True	AATAAA	-17
PB.515.1	chr1	+	6151	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	230	-10	-89	10	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	95	1192	30.0	-42	True	NA	NA
PB.10338.98	chr6	-	4613	3	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-10	1881	intron_retention	FALSE	canonical	1	288867	junction_1	15284.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	2138	2704	95.0	-3	True	NA	NA
PB.7855.24	chr22	+	3827	7	novel_in_catalog	NUP50	novel	5233	8	NA	NA	0	-597	combination_of_known_junctions	FALSE	canonical	1	6410	junction_4	35659.439589056296	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	321	1064	90.0	48	False	NA	NA
PB.9033.11	chr4	+	4969	34	novel_in_catalog	TMEM131L	novel	5017	35	NA	NA	8	4	combination_of_known_junctions	FALSE	canonical	1	1373	junction_2	111250.24736997497	NA	0	NA	TRUE	NA	NA	NA	C	coding	1462	4389	442	4830	10.0	-3	True	AATAAA	-18
PB.8178.9	chr3	-	2090	14	novel_not_in_catalog	AC096887.1	novel	823	6	NA	NA	-30987	-45196	any annotated donor/acceptor	FALSE	canonical	1	844	junction_12	89439.26706526389	NA	0	NA	TRUE	NA	NA	NA	B	coding	522	1569	274	1842	30.0	-6	True	TTTAAA	-23
PB.8178.8	chr3	-	1856	12	novel_in_catalog	AC096887.1	novel	823	6	NA	NA	-31013	-45194	no_combination_of_known_junctions	FALSE	canonical	1	13164	junction_11	71094.10043557624	NA	1	NA	TRUE	NA	NA	NA	B	coding	395	1188	419	1606	25.0	-32	True	TTTAAA	-25
PB.8178.7	chr3	-	1828	12	novel_in_catalog	AC096887.1	novel	823	6	NA	NA	-31002	-45191	no_combination_of_known_junctions	FALSE	canonical	1	5470	junction_2	67353.68599593989	NA	0	NA	TRUE	NA	NA	NA	B	coding	371	1116	56	1171	25.0	-21	True	TTTAAA	-28
PB.7855.23	chr22	+	4406	7	novel_in_catalog	NUP50	novel	5233	8	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	1	6410	junction_4	35659.439589056296	NA	3	NA	TRUE	NA	NA	NA	C	coding	247	744	321	1064	65.0	48	False	AATAAA	-3
PB.8178.5	chr3	-	1979	13	full-splice_match	RFT1	ENST00000296292.7	5108	13	9	3120	0	62	multi-exon	FALSE	canonical	1	179492	junction_12	33479.27616410221	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	54	1679	20.0	-19	True	AATATA	-20
PB.4844.4	chr17	-	4031	3	full-splice_match	IFT20	ENST00000578547.1	962	3	6	-3075	0	0	multi-exon	FALSE	canonical	1	85598	junction_2	50846.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	295	609	10.0	-18	True	AATAAA	-17
PB.4844.3	chr17	-	2472	3	full-splice_match	IFT20	ENST00000582797.5	1104	3	-8	-1360	0	0	multi-exon	FALSE	canonical	1	187075	junction_2	115987.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	96	291	142	432	10.0	-24	True	AATAAA	-19
PB.2238.8	chr11	-	3160	15	full-splice_match	MTMR2	ENST00000346299.9	4681	15	311	1210	112	-3	multi-exon	FALSE	canonical	1	101789	junction_14	97265.74303026525	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	31	1962	15.0	45	True	ATTAAA	-24
PB.4844.1	chr17	-	3813	2	full-splice_match	IFT20	ENST00000580357.1	752	2	0	-3061	0	0	multi-exon	FALSE	canonical	1	187075	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	78	237	153	389	10.0	-35	True	AATAAA	-19
PB.2436.13	chr12	+	3246	9	novel_in_catalog	ENO2	novel	547	6	NA	NA	162	0	intron_retention	FALSE	canonical	1	840800	junction_1	253546.3241638498	NA	5	NA	TRUE	NA	NA	NA	C	coding	263	792	1052	1843	20.0	-9100	False	ATTAAA	-15
PB.11328.6	chr8	+	5918	23	full-splice_match	FAM91A1	ENST00000521166.5	2706	23	-15	-3197	-15	834	multi-exon	FALSE	canonical	1	11858	junction_4	105857.71736109194	NA	2	NA	TRUE	NA	NA	NA	C	coding	789	2370	263	2632	70.0	2	True	NA	NA
PB.3643.1	chr14	+	2245	5	full-splice_match	SERPINA5	ENST00000554866.5	2211	5	-32	-2	-7	2	multi-exon	TRUE	canonical	1	88374	junction_1	53296.7639941676	NA	0	NA	TRUE	NA	NA	NA	A	coding	406	1221	147	1367	20.0	-6195	False	AATAAA	-17
PB.2238.9	chr11	-	3536	18	novel_not_in_catalog	MTMR2	novel	4681	15	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	1469	junction_13	154155.1856031418	NA	4	NA	TRUE	NA	NA	NA	C	coding	571	1716	619	2334	20.0	-3	True	ATTAAA	-28
PB.543.11	chr1	-	1930	4	full-splice_match	TMED5	ENST00000370282.7	6104	4	308	3866	-59	588	multi-exon	FALSE	canonical	1	481907	junction_3	127315.80578493256	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	179	868	55.0	-8	True	AATAAA	-19
PB.8752.7	chr4	-	3422	17	novel_in_catalog	APBB2	novel	8972	18	NA	NA	-5	-56	combination_of_known_junctions	FALSE	canonical	1	43553	junction_14	58341.65518253232	NA	6	NA	TRUE	NA	NA	NA	C	coding	759	2280	440	2719	5.0	2186	False	ATTAAA	-17
PB.515.5	chr1	+	1602	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	172	4597	-147	319	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	153	1250	30.0	4	True	AATAAA	-16
PB.7855.20	chr22	+	1553	5	incomplete-splice_match	NUP50	ENST00000347635.8	5233	8	146	8885	0	230	3prime_fragment	FALSE	canonical	1	24337	junction_1	21693.02317566641	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	321	1346	50.0	48	False	NA	NA
PB.515.4	chr1	+	2635	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	-3	3739	3	1177	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	328	1425	25.0	-3	True	NA	NA
PB.4708.8	chr17	-	1140	7	full-splice_match	DERL2	ENST00000158771.8	4209	7	29	3040	-5	18	multi-exon	FALSE	canonical	1	338339	junction_6	100563.41273544768	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	28	747	25.0	-15	True	AATAAA	-27
PB.4708.9	chr17	-	1291	8	novel_not_in_catalog	DERL2	novel	4209	7	NA	NA	-5	17	any annotated donor/acceptor	FALSE	canonical	1	26488	junction_1	221324.69328079218	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	28	684	20.0	-15	True	AATAAA	-26
PB.4708.4	chr17	-	3627	8	novel_not_in_catalog	DERL2	novel	4209	7	NA	NA	-10	-6	any annotated donor/acceptor	FALSE	canonical	1	604	junction_1	188957.53695840703	NA	2	NA	TRUE	NA	NA	NA	C	coding	295	888	33	920	30.0	-20	True	AATAAA	-22
PB.4708.5	chr17	-	4380	7	novel_in_catalog	DERL2	novel	4209	7	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	1	14055	junction_6	197494.67370173696	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	229	954	30.0	-16	True	AATAAA	-21
PB.4708.6	chr17	-	4324	8	novel_not_in_catalog	DERL2	novel	4209	7	NA	NA	-6	-9	any annotated donor/acceptor	FALSE	canonical	1	26488	junction_1	221324.69328079218	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	29	685	35.0	-16	True	AATAAA	-19
PB.4708.7	chr17	-	4228	7	novel_not_in_catalog	DERL2	novel	4209	7	NA	NA	-4	-9	any annotated donor/acceptor	FALSE	canonical	1	26488	junction_1	227935.68645685026	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-14	True	AATAAA	-19
PB.6955.2	chr2	+	5701	9	novel_not_in_catalog	FAM117B	novel	5763	8	NA	NA	-206	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	40684.1380784637	NA	3	NA	TRUE	NA	NA	NA	C	coding	449	1350	358	1707	15.0	4	True	AATAAA	-17
PB.4708.1	chr17	-	4087	6	full-splice_match	DERL2	ENST00000571476.5	570	6	-46	-3471	-11	-5	multi-exon	FALSE	canonical	1	26714	junction_3	195776.12469900408	NA	7	NA	TRUE	NA	NA	NA	C	coding	99	300	360	659	25.0	622	False	AATAAA	-23
PB.4708.2	chr17	-	4297	6	novel_in_catalog	DERL2	novel	4209	7	NA	NA	-16	-6	combination_of_known_junctions	FALSE	canonical	1	14055	junction_5	242390.00934444473	NA	4	NA	TRUE	NA	NA	NA	C	coding	103	312	39	350	30.0	617	False	AATAAA	-22
PB.4708.3	chr17	-	4173	7	full-splice_match	DERL2	ENST00000158771.8	4209	7	30	6	-4	-6	multi-exon	FALSE	canonical	1	338339	junction_6	100563.41273544768	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	27	746	30.0	-14	True	AATAAA	-22
PB.3542.19	chr14	-	2918	8	novel_in_catalog	NUMB	novel	3607	11	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	3526	junction_1	188317.31347968004	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	221	1558	25.0	-20	True	AATAAA	-13
PB.3542.18	chr14	-	3002	9	novel_in_catalog	NUMB	novel	3607	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	3526	junction_1	156545.4904611895	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	305	1642	25.0	-19	True	AATAAA	-13
PB.3309.1	chr14	+	1108	5	novel_not_in_catalog	TRAC	novel	976	4	NA	NA	-15640	-1	any annotated donor/acceptor	FALSE	canonical	1	68030	junction_1	455242.0358762468	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	76	558	15.0	0	True	ATTAAA	-16
PB.3309.2	chr14	+	4741	1	intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	120	363	2842	3204	80.0	-3	True	NA	NA
PB.3542.11	chr14	-	3488	12	full-splice_match	NUMB	ENST00000555394.5	3037	12	4	-455	1	0	multi-exon	FALSE	canonical	1	96919	junction_7	145315.85678357267	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	317	2128	25.0	-31	True	AATAAA	-13
PB.3542.10	chr14	-	3595	12	full-splice_match	NUMB	ENST00000557597.5	3547	12	-50	2	-1	0	multi-exon	FALSE	canonical	1	110264	junction_1	138411.90221011156	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	313	2235	25.0	-27	True	AATAAA	-13
PB.3542.13	chr14	-	3520	12	novel_not_in_catalog	NUMB	novel	3607	11	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	201683.56358463707	NA	11	4	TRUE	NA	NA	NA	C	coding	603	1812	349	2160	25.0	-32	True	AATAAA	-13
PB.3542.12	chr14	-	3518	11	novel_in_catalog	NUMB	novel	3607	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	95239	junction_9	164703.10979990632	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	236	2158	25.0	-35	True	AATAAA	-13
PB.3542.15	chr14	-	3357	11	novel_in_catalog	NUMB	novel	3607	11	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	16230	junction_10	183566.84354929134	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	186	1997	25.0	-32	True	AATAAA	-13
PB.3542.14	chr14	-	3362	10	novel_not_in_catalog	NUMB	novel	3607	11	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	57737	junction_3	163205.77082011424	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	233	2002	25.0	-32	True	AATAAA	-13
PB.3542.16	chr14	-	3161	10	novel_in_catalog	NUMB	novel	3607	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	34835	junction_2	139535.5090275599	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	317	1801	25.0	-31	True	AATAAA	-13
PB.10081.1	chr6	-	1918	11	novel_in_catalog	UBE3D	novel	1917	10	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	4374	junction_10	23000.97436827405	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	314	1366	20.0	9	True	ATTAAA	-18
PB.10081.2	chr6	-	1829	10	full-splice_match	UBE3D	ENST00000369747.7	1917	10	16	72	-2	-3	multi-exon	FALSE	canonical	1	44950	junction_5	9053.5682768293	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	108	1277	20.0	5	True	ATTAAA	-18
PB.10081.3	chr6	-	2917	8	incomplete-splice_match	UBE3D	ENST00000369747.7	1917	10	4	124787	2	-3	3prime_fragment	FALSE	canonical	1	44950	junction_3	8849.143839597	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	120	1133	45.0	-7	True	NA	NA
PB.7855.29	chr22	+	2550	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	154	2529	-2	-138	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	33	NA	TRUE	NA	NA	NA	C	coding	468	1407	313	1719	45.0	56	False	AATGAA	-20
PB.6810.2	chr2	-	2695	26	full-splice_match	FAP	ENST00000188790.8	2780	26	90	-5	11	0	multi-exon	FALSE	canonical	1	89282	junction_14	29310.459882192226	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	119	2401	15.0	-1	True	AATAAA	-19
PB.5208.1	chr17	-	2017	1	antisense	novelGene_ARSG_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	313	False	NA	NA
PB.8848.9	chr4	-	2930	7	full-splice_match	HNRNPDL	ENST00000507721.5	2404	7	-530	4	-61	0	multi-exon	FALSE	canonical	1	2760139	junction_1	603702.1009661048	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	595	1500	10.0	792	False	AATAAA	-15
PB.8848.8	chr4	-	2003	9	full-splice_match	HNRNPDL	ENST00000502762.4	2356	9	353	0	177	0	multi-exon	FALSE	canonical	1	289954	junction_1	1681340.0085949628	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	359	1621	10.0	-19	True	AATAAA	-15
PB.5078.5	chr17	+	4139	5	full-splice_match	NFE2L1	ENST00000357480.9	4672	5	-36	569	5	-569	multi-exon	FALSE	canonical	1	388263	junction_1	622416.3549471427	NA	3	NA	TRUE	NA	NA	NA	C	coding	742	2229	642	2870	15.0	5	True	AGTAAA	-25
PB.5078.4	chr17	+	4691	5	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	1	4	intron_retention	FALSE	canonical	1	95672	junction_2	810352.6917062101	NA	4	NA	TRUE	NA	NA	NA	C	coding	731	2196	646	2841	20.0	1	True	AATAAA	-29
PB.5078.7	chr17	+	4205	6	full-splice_match	NFE2L1	ENST00000362042.7	4774	6	-6	575	-6	-574	multi-exon	FALSE	canonical	1	388263	junction_1	646623.2602494283	NA	3	NA	TRUE	NA	NA	NA	C	coding	772	2319	623	2941	30.0	-6	True	AGTAAA	-20
PB.5078.6	chr17	+	4649	6	novel_not_in_catalog	NFE2L1	novel	568	2	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	759369.3312050467	NA	6	NA	TRUE	NA	NA	NA	C	coding	720	2163	643	2805	20.0	4	True	AATAAA	-23
PB.5078.1	chr17	+	4797	6	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	95672	junction_2	715066.5161103826	NA	2	NA	TRUE	NA	NA	NA	C	coding	761	2286	667	2952	15.0	-7644	False	AATAAA	-24
PB.99.5	chr1	+	2822	18	novel_in_catalog	PLOD1	novel	991	9	NA	NA	-7	2	no_combination_of_known_junctions	FALSE	canonical	1	10894	junction_16	358753.9385993893	NA	2	NA	TRUE	NA	NA	NA	C	coding	678	2037	54	2090	30.0	2	True	ATTAAA	-18
PB.5078.3	chr17	+	4727	5	full-splice_match	NFE2L1	ENST00000357480.9	4672	5	-50	-5	-9	-3	multi-exon	FALSE	canonical	1	388263	junction_1	622416.3549471427	NA	3	NA	TRUE	NA	NA	NA	C	coding	742	2229	656	2884	20.0	-7633	False	AATAAA	-22
PB.5078.2	chr17	+	4261	6	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	-20	-529	intron_retention	FALSE	canonical	1	95672	junction_2	715066.5161103826	NA	27	1	TRUE	NA	NA	NA	C	coding	761	2286	667	2952	20.0	-7644	False	CATAAA	-16
PB.5078.9	chr17	+	4409	6	full-splice_match	NFE2L1	ENST00000585291.5	4390	6	-27	8	7	0	multi-exon	FALSE	canonical	1	37128	junction_2	749348.0831278879	NA	2	NA	TRUE	NA	NA	NA	C	coding	742	2229	343	2571	20.0	7	True	AATAAA	-17
PB.5078.8	chr17	+	4787	6	full-splice_match	NFE2L1	ENST00000362042.7	4774	6	-8	-5	-8	-2	multi-exon	FALSE	canonical	1	388263	junction_1	646623.2602494283	NA	12	NA	TRUE	NA	NA	NA	C	coding	772	2319	625	2943	20.0	-8	True	AATAAA	-23
PB.2576.15	chr12	-	1961	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	-18	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	125201.53615828787	NA	0	NA	TRUE	NA	NA	NA	B	coding	429	1290	62	1351	50.0	-1	True	ATTAAA	-19
PB.2576.14	chr12	-	2246	11	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	-17	any annotated donor/acceptor	FALSE	canonical	1	363	junction_6	126002.17173112535	NA	0	NA	TRUE	NA	NA	NA	B	coding	347	1044	62	1105	50.0	-1	True	ATTAAA	-20
PB.2576.13	chr12	-	2272	11	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	3	-17	any annotated donor/acceptor	FALSE	canonical	1	363	junction_6	137626.780217696	NA	0	NA	TRUE	NA	NA	NA	B	coding	471	1416	57	1472	50.0	4	True	ATTAAA	-20
PB.2576.12	chr12	-	2312	12	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	-9	-9	any annotated donor/acceptor	FALSE	canonical	1	363	junction_7	128881.3938904954	NA	1	NA	TRUE	NA	NA	NA	B	coding	347	1044	71	1114	45.0	-10	True	ATTAAA	-28
PB.2576.11	chr12	-	2146	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	363	junction_6	132957.6575030237	NA	1	NA	TRUE	NA	NA	NA	B	coding	123	372	1149	1520	30.0	-1	True	ATTAAA	-35
PB.2576.10	chr12	-	3757	9	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	139438.5023033788	NA	1	NA	TRUE	NA	NA	NA	B	coding	216	651	504	1154	30.0	2	True	ATTAAA	-35
PB.787.15	chr1	-	2133	14	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-10519	-2661	any annotated donor/acceptor	FALSE	canonical	1	68012	junction_1	485126.2332770695	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	129	1553	15.0	3	True	ATTAAA	-16
PB.11073.1	chr8	+	2907	9	full-splice_match	RBPMS	ENST00000397323.8	2941	9	28	6	-4	-1	multi-exon	FALSE	canonical	1	216871	junction_6	241853.66871778067	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	587	1177	35.0	-2701	False	AATAAA	-19
PB.11073.2	chr8	+	1313	7	full-splice_match	RBPMS	ENST00000339877.8	1341	7	16	12	0	-7	multi-exon	FALSE	canonical	1	418640	junction_1	158334.5962283845	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	567	1226	55.0	0	True	AATAAA	-16
PB.11073.3	chr8	+	2848	5	incomplete-splice_match	RBPMS	ENST00000517860.5	1076	6	-544	38829	14	2017	3prime_fragment	FALSE	canonical	1	418640	junction_1	122948.50951185825	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	553	990	95.0	0	True	NA	NA
PB.7213.21	chr20	+	3390	16	incomplete-splice_match	PYGB	ENST00000216962.8	4134	20	26626	3	-15153	-3	5prime_fragment	FALSE	canonical	1	720266	junction_3	175738.19416638554	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	42	1901	15.0	14	True	ATTAAA	-23
PB.7213.27	chr20	+	2798	10	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	-7798	-4	any annotated donor/acceptor	TRUE	canonical	1	14345	junction_3	432626.16082222504	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	624	1310	15.0	7369	False	ATTAAA	-22
PB.11528.1	chr9	-	3246	17	full-splice_match	GBA2	ENST00000378103.7	3611	17	363	2	108	-1	multi-exon	FALSE	canonical	1	211270	junction_14	91544.38461606683	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2784	162	2945	15.0	8279	False	AATAAA	-14
PB.9457.1	chr5	-	6514	7	full-splice_match	SAR1B	ENST00000402673.6	6682	7	158	10	-5	-10	multi-exon	FALSE	canonical	1	439283	junction_5	149105.2331394956	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	122	718	35.0	-6	True	AATAAA	-18
PB.9457.2	chr5	-	1828	7	full-splice_match	SAR1B	ENST00000402673.6	6682	7	148	4706	-15	579	multi-exon	FALSE	canonical	1	439283	junction_5	149105.2331394956	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	132	728	30.0	2	True	AATAAA	-18
PB.9457.3	chr5	-	1250	7	full-splice_match	SAR1B	ENST00000402673.6	6682	7	158	5274	-5	11	multi-exon	FALSE	canonical	1	439283	junction_5	149105.2331394956	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	122	718	35.0	-6	True	AATAAA	-32
PB.9457.4	chr5	-	1351	8	full-splice_match	SAR1B	ENST00000439578.5	929	8	-50	-372	1	0	multi-exon	FALSE	canonical	1	30	junction_6	315301.05698872	NA	3	NA	TRUE	NA	NA	NA	C	coding	198	597	235	831	20.0	0	True	AATAAA	-20
PB.6697.13	chr2	+	2377	14	incomplete-splice_match	POLR1B	ENST00000263331.9	4558	15	550	2662	0	1039	3prime_fragment	FALSE	canonical	1	132619	junction_3	37898.35106590777	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2346	31	2376	65.0	0	True	NA	NA
PB.6524.6	chr2	-	3982	20	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	13	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	189035.48890391266	NA	2	1	TRUE	NA	NA	NA	C	coding	681	2046	165	2210	40.0	72	False	AATAAA	-11
PB.6697.11	chr2	+	5555	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	535	-1532	0	681	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	0	NA	TRUE	NA	NA	NA	C	coding	1135	3408	46	3453	100.0	-15	True	NA	NA
PB.3540.8	chr14	+	2756	13	novel_in_catalog	PSEN1	novel	571	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	2055	junction_1	157953.2351280488	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	241	1644	10.0	13	True	ATTAAA	-25
PB.6697.15	chr2	+	4162	17	novel_in_catalog	POLR1B	novel	4558	15	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	172	junction_5	93512.28815909704	NA	8	NA	TRUE	NA	NA	NA	C	coding	970	2913	683	3595	10.0	3	True	NA	NA
PB.6697.14	chr2	+	6550	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	552	-2544	2	1693	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	4	NA	TRUE	NA	NA	NA	C	coding	1135	3408	29	3436	35.0	2	True	NA	NA
PB.3542.9	chr14	-	3689	11	novel_in_catalog	NUMB	novel	3607	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	4002	junction_10	147566.2433296992	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	551	2329	25.0	9523	False	AATAAA	-13
PB.8061.4	chr3	-	4466	4	novel_not_in_catalog	KIAA1143	novel	507	4	NA	NA	6	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	30531.761080335124	NA	2	1	TRUE	NA	NA	NA	C	coding	154	465	55	519	40.0	5	True	NA	NA
PB.6446.7	chr2	-	2563	20	novel_not_in_catalog	SRBD1	novel	3681	21	NA	NA	18	-4301	any annotated donor/acceptor	FALSE	canonical	1	6683	junction_5	48060.23796661022	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2517	46	2562	60.0	3	True	NA	NA
PB.6446.6	chr2	-	2715	20	incomplete-splice_match	SRBD1	ENST00000263736.4	3681	21	-83	4394	-83	-4298	3prime_fragment	FALSE	canonical	1	73521	junction_19	31493.337749760638	NA	1	NA	TRUE	NA	NA	NA	C	coding	856	2568	147	2714	50.0	-98	False	NA	NA
PB.2204.9	chr11	-	3489	4	full-splice_match	CREBZF	ENST00000525639.1	2850	4	-27	-612	-27	-15	multi-exon	FALSE	canonical	1	23404	junction_1	104800.37651755943	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	255	1331	55.0	-1	True	NA	NA
PB.6446.4	chr2	-	3569	21	full-splice_match	SRBD1	ENST00000263736.4	3681	21	9	103	9	-7	multi-exon	FALSE	canonical	1	73521	junction_20	31411.021652598312	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	55	3042	35.0	-6	True	AATATA	-6
PB.6446.3	chr2	-	3577	20	novel_in_catalog	SRBD1	novel	3681	21	NA	NA	9	-3	no_combination_of_known_junctions	FALSE	canonical	1	6153	junction_6	42717.006272583836	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	55	1965	10.0	-6	True	AATAAA	-14
PB.8734.17	chr4	-	3666	5	novel_in_catalog	TLR10	novel	3958	4	NA	NA	1	-29	combination_of_known_junctions	FALSE	canonical	1	997	junction_3	15334.357573354679	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	760	3153	95.0	1	True	NA	NA
PB.6446.1	chr2	-	3596	21	full-splice_match	SRBD1	ENST00000263736.4	3681	21	12	73	12	23	multi-exon	FALSE	canonical	1	73521	junction_20	31411.021652598312	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	52	3039	45.0	-3	True	AATATA	-36
PB.2204.3	chr11	-	3244	4	full-splice_match	CREBZF	ENST00000260058.9	1431	4	-465	-1348	-16	903	multi-exon	FALSE	canonical	1	49676	junction_1	93045.2384070363	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	244	1320	10.0	10	True	AATACA	-25
PB.2204.2	chr11	-	3377	4	full-splice_match	CREBZF	ENST00000260058.9	1431	4	-475	-1471	-26	1026	multi-exon	FALSE	canonical	1	49676	junction_1	93045.2384070363	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	254	1330	35.0	0	True	TATAAA	-17
PB.2204.1	chr11	-	4057	4	full-splice_match	CREBZF	ENST00000260058.9	1431	4	-459	-2167	-10	1722	multi-exon	FALSE	canonical	1	49676	junction_1	93045.2384070363	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	238	1314	20.0	16	True	AATAAA	-30
PB.2204.7	chr11	-	2889	3	novel_not_in_catalog	CREBZF	novel	4329	2	NA	NA	-10	-4	intron_retention	FALSE	canonical	1	49676	junction_1	11924.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	238	1302	30.0	16	True	AAAACA	-4
PB.2204.6	chr11	-	2462	5	full-splice_match	CREBZF	ENST00000527529.6	898	5	-940	-624	-27	-3	multi-exon	FALSE	canonical	1	23404	junction_2	109327.11406142577	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	255	1331	25.0	-1	True	AAAACA	-5
PB.2204.5	chr11	-	2353	4	full-splice_match	CREBZF	ENST00000260058.9	1431	4	-475	-447	-26	2	multi-exon	FALSE	canonical	1	49676	junction_1	93045.2384070363	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	254	1330	15.0	0	True	AAAACA	-10
PB.2204.4	chr11	-	3340	5	novel_not_in_catalog	CREBZF	novel	4329	2	NA	NA	-8	892	any annotated donor/acceptor	FALSE	canonical	1	49676	junction_1	59596.883250615545	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	236	1312	20.0	18	True	AATACA	-14
PB.379.28	chr1	-	3038	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	52	138	combination_of_known_junctions	FALSE	canonical	1	24395	junction_11	228949.86950465458	NA	5	1	TRUE	NA	NA	NA	C	coding	474	1425	1177	2601	20.0	-1	True	ATTAAA	-17
PB.2583.9	chr12	-	2861	3	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-108	-32701	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	625375.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	98	297	2	298	15.0	3	True	ATTAAA	-19
PB.2583.8	chr12	-	2972	3	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-121	-32701	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	625375.5	NA	5	1	TRUE	NA	NA	NA	B	coding	79	240	342	581	15.0	-10	True	ATTAAA	-19
PB.8061.5	chr3	-	4062	4	novel_not_in_catalog	KIAA1143	novel	507	4	NA	NA	17	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	30531.761080335124	NA	2	1	TRUE	NA	NA	NA	C	coding	154	465	44	508	40.0	16	False	NA	NA
PB.2583.3	chr12	-	3240	4	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-107	-32700	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1400770.0733606815	NA	6	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	4	True	ATTAAA	-20
PB.2583.1	chr12	-	4068	5	full-splice_match	ARF3	ENST00000256682.8	4105	5	37	0	-37	0	multi-exon	FALSE	canonical	1	1250751	junction_4	709788.2310214082	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	299	844	25.0	-1	True	AATAAA	-18
PB.2583.7	chr12	-	3432	6	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-114	-32701	any annotated donor/acceptor	FALSE	canonical	1	52	junction_1	1130909.9261127033	NA	2	1	TRUE	NA	NA	NA	B	coding	181	546	264	809	15.0	-3	True	ATTAAA	-19
PB.2583.6	chr12	-	3592	5	full-splice_match	ARF3	ENST00000256682.8	4105	5	26	487	26	-487	multi-exon	FALSE	canonical	1	1250751	junction_4	709788.2310214082	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	310	855	20.0	0	True	ATTAAA	-13
PB.2583.5	chr12	-	3850	6	novel_in_catalog	AC073610.3	novel	939	5	NA	NA	351	-32701	no_combination_of_known_junctions	FALSE	canonical	1	672	junction_5	1344527.592298559	NA	0	NA	TRUE	NA	NA	NA	B	coding	181	546	562	1107	15.0	511	False	ATTAAA	-19
PB.2583.4	chr12	-	2709	2	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-121	-32701	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-10	True	ATTAAA	-19
PB.10041.3	chr6	-	3754	19	novel_not_in_catalog	DST	novel	16742	84	NA	NA	-846	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	159509.14347374695	NA	3	1	TRUE	NA	NA	NA	B	coding	985	2958	31	2988	30.0	4640	False	AATAAA	-18
PB.2527.4	chr12	-	3184	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-16	1846	6	1659	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	93	1226	35.0	-20	True	ATTAAA	-16
PB.11087.1	chr8	-	2121	4	full-splice_match	BRF2	ENST00000220659.10	2603	4	12	470	12	-470	multi-exon	TRUE	canonical	1	181734	junction_2	4846.275843939917	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	110	1369	30.0	-39	False	AATACA	-20
PB.379.29	chr1	-	3149	13	full-splice_match	GPBP1L1	ENST00000355105.7	3736	13	72	515	-22	136	multi-exon	FALSE	canonical	1	280510	junction_12	190119.26785288402	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1290	2714	20.0	-32	True	ATTAAA	-15
PB.4502.1	chr16	-	1911	1	full-splice_match	DDX28	ENST00000332395.6	2169	1	231	27	231	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	540	1623	10	1632	40.0	13	True	AATAAA	-22
PB.1140.21	chr1	+	2086	1	novel_in_catalog	MIA3	novel	8142	28	NA	NA	25	278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	51	156	310	465	90.0	-1	True	NA	NA
PB.1225.2	chr1	+	2031	9	novel_in_catalog	LGALS8	novel	799	5	NA	NA	-3	0	intron_retention	FALSE	canonical	1	311421	junction_2	81064.34186766398	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	187	786	5.0	-3	True	NA	NA
PB.11087.2	chr8	-	1942	4	full-splice_match	BRF2	ENST00000220659.10	2603	4	10	651	10	-651	multi-exon	FALSE	canonical	1	181734	junction_2	4846.275843939917	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	112	1371	50.0	-41	False	ATTAAA	-19
PB.8734.11	chr4	-	3480	2	full-splice_match	TLR10	ENST00000361424.6	3484	2	4	0	3	0	multi-exon	FALSE	canonical	1	21404	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	171	2564	25.0	3	True	NA	NA
PB.2920.8	chr12	+	2559	7	incomplete-splice_match	OAS3	ENST00000228928.11	6719	16	132	21419	24	4851	3prime_fragment	FALSE	canonical	1	120768	junction_1	37642.63656635474	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	48	1838	85.0	-28	True	NA	NA
PB.2920.9	chr12	+	3912	14	incomplete-splice_match	OAS3	ENST00000228928.11	6719	16	144	4302	36	893	3prime_fragment	FALSE	canonical	1	120768	junction_1	52747.87763699218	NA	2	NA	TRUE	NA	NA	NA	C	coding	1073	3222	36	3257	30.0	-16	True	AATAGA	-18
PB.5460.4	chr18	-	3599	10	novel_not_in_catalog	EPG5	novel	6375	8	NA	NA	-6825	-3039	any annotated donor/acceptor	FALSE	canonical	1	763	junction_9	50507.30820606284	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	38	1780	50.0	NA	False	AATAAA	-19
PB.7111.43	chr2	-	2059	15	incomplete-splice_match	HDLBP	ENST00000310931.8	4571	28	128	17850	12	-398	3prime_fragment	FALSE	canonical	1	560638	junction_14	698798.9714892063	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1812	248	2059	40.0	0	True	NA	NA
PB.2920.2	chr12	+	6534	16	novel_in_catalog	OAS3	novel	6719	16	NA	NA	30	-2	combination_of_known_junctions	FALSE	canonical	1	10901	junction_11	78404.94978751164	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	150	3260	15.0	-157	False	NA	NA
PB.2920.3	chr12	+	6330	16	full-splice_match	OAS3	ENST00000228928.11	6719	16	147	242	39	-242	multi-exon	FALSE	canonical	1	120768	junction_1	54677.52916566569	NA	1	NA	TRUE	NA	NA	NA	C	coding	1087	3264	33	3296	25.0	-13	True	NA	NA
PB.2920.1	chr12	+	6511	16	full-splice_match	OAS3	ENST00000228928.11	6719	16	206	2	12	-2	multi-exon	FALSE	canonical	1	120768	junction_1	54677.52916566569	NA	1	NA	TRUE	NA	NA	NA	C	coding	987	2964	274	3237	15.0	19	False	NA	NA
PB.2920.6	chr12	+	4215	16	full-splice_match	OAS3	ENST00000228928.11	6719	16	132	2372	24	172	multi-exon	FALSE	canonical	1	120768	junction_1	54677.52916566569	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	48	3311	15.0	-28	True	NA	NA
PB.2920.7	chr12	+	6507	16	novel_not_in_catalog	OAS3	novel	6719	16	NA	NA	24	-2	any annotated donor/acceptor	FALSE	canonical	1	2892	junction_1	75647.92617969702	NA	1	NA	TRUE	NA	NA	NA	C	coding	1061	3186	48	3233	15.0	-28	True	NA	NA
PB.2920.4	chr12	+	6294	15	novel_in_catalog	OAS3	novel	6719	16	NA	NA	-11	1	no_combination_of_known_junctions	FALSE	canonical	1	541	junction_5	82200.91278814415	NA	1	NA	TRUE	NA	NA	NA	C	coding	972	2919	99	3017	5.0	-106	False	NA	NA
PB.2920.5	chr12	+	6531	16	novel_not_in_catalog	OAS3	novel	6719	16	NA	NA	3	-2	any annotated donor/acceptor	FALSE	canonical	1	1141	junction_6	79633.08137635599	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3189	69	3257	15.0	-49	True	NA	NA
PB.9350.13	chr5	-	5345	43	full-splice_match	TTC37	ENST00000358746.6	5706	43	12	349	12	-349	multi-exon	FALSE	canonical	1	222162	junction_41	113865.05175672805	NA	0	NA	TRUE	NA	NA	NA	C	coding	1564	4695	288	4982	50.0	-19	False	AATAAA	-31
PB.6478.2	chr2	+	1947	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	-11	1	combination_of_known_junctions	TRUE	canonical	1	34560	junction_1	111439.83157575721	NA	1	1	TRUE	NA	NA	NA	C	coding	396	1191	197	1387	45.0	-56	True	AATAAA	-16
PB.9350.11	chr5	-	2542	16	novel_in_catalog	TTC37	novel	8038	44	NA	NA	-645	-20	no_combination_of_known_junctions	FALSE	canonical	1	5773	junction_15	153683.52323172303	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	108	1850	70.0	NA	False	NA	NA
PB.9350.16	chr5	-	5151	43	full-splice_match	TTC37	ENST00000358746.6	5706	43	30	525	0	-525	multi-exon	FALSE	canonical	1	222162	junction_41	113865.05175672805	NA	0	NA	TRUE	NA	NA	NA	C	coding	1564	4695	270	4964	70.0	-1	True	NA	NA
PB.9350.17	chr5	-	2739	22	incomplete-splice_match	TTC37	ENST00000358746.6	5706	43	30	52987	0	-3750	3prime_fragment	FALSE	canonical	1	222162	junction_20	97275.58962114077	NA	1	1	TRUE	NA	NA	NA	C	coding	816	2451	270	2720	40.0	-1	True	AATAAA	-19
PB.9350.14	chr5	-	6373	40	novel_in_catalog	TTC37	novel	8038	44	NA	NA	10	-525	intron_retention	FALSE	canonical	1	222162	junction_38	117119.50827422302	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	290	2740	70.0	-21	False	NA	NA
PB.9350.15	chr5	-	5187	43	novel_not_in_catalog	TTC37	novel	8038	44	NA	NA	0	-525	any annotated donor/acceptor	FALSE	canonical	1	148	junction_32	134693.3382372251	NA	2	2	TRUE	NA	NA	NA	C	coding	1576	4731	270	5000	70.0	-1	True	NA	NA
PB.6478.8	chr2	+	3540	9	incomplete-splice_match	VRK2	ENST00000340157.8	1888	13	129	25254	-55	-25167	3prime_fragment	FALSE	canonical	1	128372	junction_1	68785.04917131338	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	55	918	100.0	6	True	NA	NA
PB.4393.1	chr16	+	2305	3	full-splice_match	KAT8	ENST00000539683.2	1051	3	-45	-1209	-12	1209	multi-exon	FALSE	canonical	1	412105	junction_1	109800.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	31	582	15.0	-407	False	AATAAA	-21
PB.4393.2	chr16	+	1511	11	full-splice_match	KAT8	ENST00000219797.8	1525	11	-9	23	-9	7	multi-exon	FALSE	canonical	1	385131	junction_6	69256.7003759203	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	28	1404	25.0	-404	False	AATAAA	-21
PB.4393.3	chr16	+	2271	4	novel_not_in_catalog	KAT8	novel	1846	12	NA	NA	-9	2939	any annotated donor/acceptor	TRUE	canonical	1	17	junction_3	261846.45875567783	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	28	579	35.0	-404	False	AATAAA	-12
PB.4393.4	chr16	+	2410	3	full-splice_match	KAT8	ENST00000539683.2	1051	3	-30	-1329	3	1329	multi-exon	FALSE	canonical	1	412105	junction_1	109800.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	16	567	40.0	3	True	TTTAAA	-23
PB.8734.10	chr4	-	3582	3	novel_not_in_catalog	TLR10	novel	3958	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1716	junction_2	4420.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	273	2666	25.0	-1	True	NA	NA
PB.11911.1	chr9	+	2239	14	incomplete-splice_match	RABL6	ENST00000311502.11	3091	15	-44	1005	-26	-3	3prime_fragment	TRUE	canonical	1	546708	junction_10	281664.4709753477	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	281	2239	75.0	-31	True	NA	NA
PB.3662.4	chr14	+	1879	5	full-splice_match	YY1	ENST00000262238.8	6697	5	159	4659	159	-9	multi-exon	FALSE	canonical	1	660983	junction_1	245384.7289079946	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	102	1346	75.0	0	True	TTTAAA	-43
PB.11518.3	chr9	-	4058	11	full-splice_match	PIGO	ENST00000378617.3	4066	11	-22	30	6	14	multi-exon	FALSE	canonical	1	9566	junction_10	79740.76948242975	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	418	3687	70.0	20	True	NA	NA
PB.7111.44	chr2	-	2050	15	incomplete-splice_match	HDLBP	ENST00000391976.6	4489	28	55	17850	-34	-398	3prime_fragment	FALSE	canonical	1	286089	junction_14	755232.6048145157	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1812	239	2050	40.0	-13	True	NA	NA
PB.3662.5	chr14	+	1486	5	full-splice_match	YY1	ENST00000262238.8	6697	5	168	5043	168	-44	multi-exon	FALSE	canonical	1	660983	junction_1	245384.7289079946	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	93	1337	85.0	9	True	GATAAA	-6
PB.8548.4	chr3	+	4246	2	novel_not_in_catalog	B3GNT5	novel	4123	2	NA	NA	26	-14	any annotated donor/acceptor	FALSE	canonical	1	503	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	336	1011	794	1804	45.0	0	True	AATAAA	-7
PB.5421.3	chr18	-	2823	12	novel_in_catalog	TMEM241	novel	1404	16	NA	NA	-1	1	intron_retention	FALSE	canonical	1	3518	junction_5	24222.6715787756	NA	7	1	TRUE	NA	NA	NA	C	coding	167	504	3	506	25.0	0	True	AATAAA	-13
PB.1690.8	chr10	+	4090	11	incomplete-splice_match	PLEKHA1	ENST00000368990.7	14010	12	31	12481	31	-358	intron_retention	FALSE	canonical	1	27138	junction_1	82826.29813145097	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	101	1096	75.0	19	True	AATATA	-8
PB.5421.1	chr18	-	3008	15	full-splice_match	TMEM241	ENST00000383233.7	2934	15	-73	-1	-17	1	multi-exon	FALSE	canonical	1	28520	junction_7	12039.270923625274	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	127	1017	25.0	-18	True	AATAAA	-13
PB.4496.10	chr16	-	1862	13	incomplete-splice_match	CENPT	ENST00000440851.6	2200	14	1405	4	-2	0	5prime_fragment	FALSE	canonical	1	207752	junction_5	132095.77425896857	NA	1	NA	TRUE	NA	NA	NA	C	coding	561	1686	75	1760	40.0	-37	True	AATAAA	-8
PB.5421.5	chr18	-	3091	16	novel_not_in_catalog	TMEM241	novel	1404	16	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2751	junction_2	21499.024709248763	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	109	1101	25.0	0	True	AATAAA	-12
PB.5421.4	chr18	-	3104	16	full-splice_match	TMEM241	ENST00000542162.5	1022	16	-91	-1991	-1	0	multi-exon	FALSE	canonical	1	13755	junction_9	17964.688302209852	NA	3	NA	TRUE	NA	NA	NA	C	coding	175	528	587	1114	25.0	0	True	AATAAA	-12
PB.12171.2	chrX	-	3945	17	full-splice_match	POF1B	ENST00000262753.8	3941	17	-1	-3	-1	3	multi-exon	FALSE	canonical	1	45028	junction_16	20698.497866693127	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	148	1917	30.0	-2	True	NA	NA
PB.1690.3	chr10	+	5190	13	novel_in_catalog	PLEKHA1	novel	603	5	NA	NA	-21	-2	intron_retention	FALSE	canonical	1	45872	junction_1	88387.99992877834	NA	5	NA	TRUE	NA	NA	NA	C	coding	334	1005	223	1227	20.0	0	True	AATAAA	-13
PB.12171.1	chrX	-	4447	17	full-splice_match	POF1B	ENST00000262753.8	3941	17	-5	-501	-5	501	multi-exon	TRUE	canonical	1	45028	junction_16	20698.497866693127	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	152	1921	25.0	-6	True	AATAAA	-16
PB.1690.5	chr10	+	3751	12	full-splice_match	PLEKHA1	ENST00000368990.7	14010	12	1	10258	1	-1	multi-exon	FALSE	canonical	1	27138	junction_1	83093.9648340041	NA	2	NA	TRUE	NA	NA	NA	C	coding	404	1215	131	1345	20.0	-11	True	AATAAA	-14
PB.1690.4	chr10	+	3885	14	novel_in_catalog	PLEKHA1	novel	603	5	NA	NA	-16	-4	no_combination_of_known_junctions	FALSE	canonical	1	45872	junction_1	92972.26288039134	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	218	1369	15.0	5	True	AATAAA	-20
PB.1690.7	chr10	+	1626	14	novel_not_in_catalog	PLEKHA1	novel	603	5	NA	NA	11	-357	any annotated donor/acceptor	FALSE	canonical	1	7760	junction_2	106027.98921290804	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	187	1338	80.0	-1	True	AATATA	-9
PB.1690.6	chr10	+	1563	13	novel_in_catalog	PLEKHA1	novel	603	5	NA	NA	8	-357	combination_of_known_junctions	FALSE	canonical	1	27138	junction_1	95398.07850164255	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	124	1275	80.0	-4	True	AATATA	-9
PB.9352.10	chr5	+	2240	12	full-splice_match	RHOBTB3	ENST00000379982.7	5537	12	188	3109	188	12	multi-exon	FALSE	canonical	1	368617	junction_1	57699.64238799474	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	321	2156	35.0	0	True	AGTAAA	-14
PB.11239.1	chr8	-	2181	5	full-splice_match	GEM	ENST00000297596.2	2208	5	26	1	0	-1	multi-exon	FALSE	canonical	1	143948	junction_4	30399.891735004585	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	240	1130	40.0	-1	True	AATAAA	-17
PB.11239.2	chr8	-	2065	5	full-splice_match	GEM	ENST00000396194.6	2103	5	31	7	0	-2	multi-exon	FALSE	canonical	1	26466	junction_4	74513.25144059947	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	125	1015	40.0	-1	True	AATAAA	-16
PB.11480.11	chr9	-	2604	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	-15	3121	-15	-3121	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	608	1827	564	2390	35.0	0	True	AAAAAG	-7
PB.12250.2	chrX	-	2877	2	full-splice_match	C1GALT1C1	ENST00000304661.5	1613	2	55	-1319	55	1319	multi-exon	FALSE	canonical	1	279277	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	185	1141	25.0	-42	True	AATAAA	-20
PB.2572.12	chr12	+	2656	21	incomplete-splice_match	PFKM	ENST00000547587.5	2867	22	7714	0	-6996	0	5prime_fragment	FALSE	canonical	1	571030	junction_5	173786.25175646087	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	5	2260	5.0	-6358	False	AATAAA	-19
PB.2572.11	chr12	+	2631	22	novel_in_catalog	PFKM	novel	3003	23	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	11828	junction_17	260813.15304102632	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	58	2235	5.0	-6	True	AATAAA	-19
PB.12250.1	chrX	-	1780	3	novel_not_in_catalog	C1GALT1C1	novel	1613	2	NA	NA	66	6676	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	2937.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	2	376	45.0	-31	True	AATAAA	-39
PB.8.1	chr1	+	2680	15	full-splice_match	PLEKHN1	ENST00000379409.6	2455	15	-54	-171	-49	71	multi-exon	TRUE	canonical	1	23473	junction_5	7504.8027591723985	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	85	2076	70.0	-56	False	NA	NA
PB.12250.4	chrX	-	1526	2	full-splice_match	C1GALT1C1	ENST00000304661.5	1613	2	80	7	-75	-7	multi-exon	FALSE	canonical	1	279277	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	160	1116	10.0	-17	True	ATTAAA	-12
PB.12250.5	chrX	-	1407	2	full-splice_match	C1GALT1C1	ENST00000304661.5	1613	2	66	140	66	-2	multi-exon	FALSE	canonical	1	279277	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	174	1130	55.0	-31	True	AATAAA	-32
PB.9209.9	chr5	+	2818	7	full-splice_match	ZNF131	ENST00000509634.5	3340	7	-6	528	-4	0	multi-exon	FALSE	canonical	1	122344	junction_5	54363.27374478104	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	463	2232	80.0	-679	False	NA	NA
PB.9047.2	chr4	+	3198	5	novel_in_catalog	RAPGEF2	novel	8225	30	NA	NA	862	-42	combination_of_known_junctions	FALSE	canonical	1	35181	junction_1	107818.44863559993	NA	2	NA	TRUE	NA	NA	NA	B	coding	314	945	266	1210	70.0	8107	False	NA	NA
PB.10584.1	chr7	+	3401	6	incomplete-splice_match	AUTS2	ENST00000647140.1	3006	13	13755	-1128	365	0	5prime_fragment	FALSE	canonical	1	160150	junction_5	13013.577939982533	NA	0	NA	TRUE	NA	NA	NA	B	coding	608	1827	86	1912	90.0	-8594	False	ATTAAA	-30
PB.8734.12	chr4	-	3699	4	full-splice_match	TLR10	ENST00000308973.8	3958	4	-32	291	0	83	multi-exon	FALSE	canonical	1	22860	junction_3	4182.1645379184	NA	2	NA	TRUE	NA	NA	NA	C	coding	797	2394	681	3074	50.0	-1	True	NA	NA
PB.7502.8	chr21	-	3305	1	novel_in_catalog	AP000311.1	novel	1078	8	NA	NA	342894	-722	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	111	336	73	408	100.0	-38	True	NA	NA
PB.6338.12	chr2	-	6153	21	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	-126	-24	any annotated donor/acceptor	FALSE	canonical	1	3605	junction_20	220820.48939635904	NA	5	1	TRUE	NA	NA	NA	C	coding	1064	3195	90	3284	40.0	1276	False	AATAAA	-22
PB.4321.17	chr16	-	3362	21	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-38	0	no_combination_of_known_junctions	FALSE	canonical	1	4586	junction_2	144701.44813078927	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	119	2446	35.0	-49	False	ATTAAA	-19
PB.4227.1	chr16	+	6430	18	full-splice_match	UBN1	ENST00000262376.10	6252	18	-182	4	-182	-4	multi-exon	FALSE	canonical	1	98338	junction_1	78131.67460721251	NA	1	NA	TRUE	NA	NA	NA	A	coding	1134	3405	802	4206	30.0	-44	True	AATAAA	-17
PB.4321.15	chr16	-	3120	18	novel_not_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-50	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	144537.52056584408	NA	5	1	TRUE	NA	NA	NA	C	coding	502	1509	131	1639	35.0	-61	False	ATTAAA	-20
PB.4321.13	chr16	-	3289	20	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	103236	junction_2	118749.27380088784	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	93	2381	35.0	-23	True	ATTAAA	-20
PB.4321.10	chr16	-	3083	18	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-24	0	no_combination_of_known_junctions	FALSE	canonical	1	7033	junction_2	124834.40962328087	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	105	1601	40.0	-35	True	ATTAAA	-21
PB.4078.2	chr15	+	2541	19	incomplete-splice_match	IQGAP1	ENST00000633485.1	5863	39	-28	27775	1	1	3prime_fragment	FALSE	canonical	1	634527	junction_11	151520.99955187933	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	124	2514	20.0	-102	False	AATAAA	-13
PB.7502.1	chr21	-	2312	8	novel_in_catalog	DONSON	novel	528	4	NA	NA	-6	66	combination_of_known_junctions	FALSE	canonical	1	32852	junction_4	90537.4703203044	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	36	1475	20.0	-1	True	AATAAA	-21
PB.9707.14	chr6	+	4005	20	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	88	0	intron_retention	FALSE	canonical	1	83959	junction_16	139308.1488096048	NA	1	NA	TRUE	NA	NA	NA	C	coding	1007	3024	13	3036	10.0	-1	True	AATAAA	-18
PB.3712.21	chr14	-	3171	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240993	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	560011.2028825852	NA	4	1	TRUE	NA	NA	NA	B	coding	199	600	1162	1761	15.0	-6816	False	AATAAA	-21
PB.9707.12	chr6	+	3636	21	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	86	-1	combination_of_known_junctions	FALSE	canonical	1	4935	junction_15	150473.07815998181	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	15	3038	10.0	-3	True	AATAAA	-17
PB.9707.13	chr6	+	4189	20	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	88	0	intron_retention	FALSE	canonical	1	30707	junction_15	144128.9373790779	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	13	3036	10.0	-1	True	AATAAA	-18
PB.9707.10	chr6	+	3604	20	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	1	23240	junction_18	161869.84011733683	NA	2	1	TRUE	NA	NA	NA	C	coding	1007	3024	17	3040	10.0	-5	True	AATAAA	-18
PB.9707.11	chr6	+	4082	16	novel_not_in_catalog	PRPF4B	novel	6775	16	NA	NA	82	-9	intron_retention	FALSE	non_canonical	0	0	junction_15	146910.77577616816	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	19	3042	35.0	-7	True	AATAAA	-11
PB.7502.3	chr21	-	2428	9	full-splice_match	DONSON	ENST00000437395.5	1719	9	-50	-659	-14	-6	multi-exon	FALSE	canonical	1	6310	junction_8	87293.43453547925	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	44	1663	60.0	-9	True	AATAAA	-28
PB.4327.11	chr16	+	4628	8	novel_in_catalog	IL21R	novel	4849	9	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	1827	junction_3	50694.64587878595	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	697	1869	10.0	9	True	NA	NA
PB.4327.10	chr16	+	3272	9	full-splice_match	IL21R	ENST00000337929.7	4849	9	19	1558	7	-1	multi-exon	FALSE	canonical	1	56923	junction_1	29658.138330555663	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	455	2071	25.0	7	True	AATAAA	-32
PB.4327.13	chr16	+	2972	10	full-splice_match	IL21R	ENST00000564089.5	3009	10	37	0	37	0	multi-exon	FALSE	canonical	1	13163	junction_2	47756.47949057105	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	566	2182	15.0	0	True	AATAAA	-15
PB.4327.12	chr16	+	3885	10	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	45759.61888870477	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	453	2069	15.0	9	True	NA	NA
PB.4327.15	chr16	+	3001	9	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	351	-6	any annotated donor/acceptor	FALSE	canonical	1	636	junction_2	48282.26924539043	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	111	1805	35.0	15	True	AATAAA	-27
PB.9239.3	chr5	-	6507	1	genic	PDE4D	novel	NA	NA	NA	NA	-8	-527020	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	155	468	4906	5373	95.0	-12	True	NA	NA
PB.4327.17	chr16	+	3092	9	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	6134	-9	any annotated donor/acceptor	FALSE	canonical	1	623	junction_1	45247.92250600435	NA	3	NA	TRUE	NA	NA	NA	C	coding	567	1704	196	1899	40.0	5798	False	AATAAA	-24
PB.4327.16	chr16	+	4322	8	novel_in_catalog	IL21R	novel	4849	9	NA	NA	359	-1	no_combination_of_known_junctions	FALSE	canonical	1	7115	junction_4	49526.200029347485	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	560	1564	15.0	23	True	NA	NA
PB.4327.19	chr16	+	2537	9	full-splice_match	IL21R	ENST00000395754.4	2953	9	4	412	4	0	multi-exon	FALSE	canonical	1	15323	junction_1	40933.89144992661	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	131	1747	15.0	0	True	AATAAA	-15
PB.4327.18	chr16	+	4510	9	full-splice_match	IL21R	ENST00000395754.4	2953	9	4	-1561	4	4	multi-exon	FALSE	canonical	1	15323	junction_1	40933.89144992661	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	131	1747	20.0	0	True	NA	NA
PB.10227.2	chr6	-	2188	9	novel_not_in_catalog	MTFR2	novel	1524	8	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	3155	junction_4	46045.299422823824	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	404	997	15.0	13	True	AATAAA	-12
PB.10450.4	chr7	+	2183	7	full-splice_match	SNX10	ENST00000338523.8	2546	7	-19	382	9	-374	multi-exon	FALSE	canonical	1	170401	junction_1	83849.13991806953	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	207	812	40.0	-1131	False	ATTAAA	-16
PB.1702.8	chr10	-	3561	7	novel_not_in_catalog	AC068896.1	novel	3422	10	NA	NA	-160	-140762	any annotated donor/acceptor	FALSE	canonical	1	16133	junction_3	69134.43634305715	NA	1	NA	TRUE	NA	NA	NA	B	coding	281	846	55	900	55.0	-14	True	ACTAAA	-8
PB.4491.1	chr16	+	3680	12	full-splice_match	CTCF	ENST00000264010.9	3941	12	253	8	71	1	multi-exon	FALSE	canonical	1	134934	junction_1	132777.1347594367	NA	0	NA	TRUE	NA	NA	NA	A	coding	727	2184	192	2375	25.0	-8103	False	AATAAA	-22
PB.10450.5	chr7	+	2060	7	full-splice_match	SNX10	ENST00000338523.8	2546	7	48	438	-40	-430	multi-exon	FALSE	canonical	1	170401	junction_1	83849.13991806953	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	140	745	70.0	-43	True	ATTAAA	-31
PB.1392.10	chr10	+	4028	12	incomplete-splice_match	ALOX5	ENST00000374391.6	2506	14	-17	3	-17	-3	intron_retention	FALSE	canonical	1	211939	junction_10	50531.855962107766	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	71	2107	25.0	-6	True	AATAAA	-11
PB.1392.11	chr10	+	2642	15	novel_not_in_catalog	ALOX5	novel	2390	13	NA	NA	-11	-2	any annotated donor/acceptor	FALSE	canonical	1	1527	junction_13	109599.40963344647	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	65	2026	25.0	0	True	AATAAA	-12
PB.6338.45	chr2	-	4535	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	6	-197	combination_of_known_junctions	FALSE	canonical	1	19552	junction_19	220150.37967247187	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	54	3011	35.0	-11	True	ATTAAA	-23
PB.6338.46	chr2	-	3286	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	19552	junction_19	220150.37967247187	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	54	3011	60.0	-11	True	NA	NA
PB.10450.1	chr7	+	2470	9	novel_in_catalog	SNX10	novel	2613	7	NA	NA	-80	-425	combination_of_known_junctions	FALSE	canonical	1	2675	junction_2	154924.84413902115	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	476	1150	70.0	-1220	False	ATTAAA	-36
PB.9225.1	chr5	-	3317	5	full-splice_match	ARL15	ENST00000504924.5	2486	5	6	-837	6	-2	multi-exon	FALSE	canonical	1	91083	junction_1	25310.05251253936	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	89	703	30.0	5	True	AATAAA	-11
PB.9225.2	chr5	-	2507	5	full-splice_match	ARL15	ENST00000504924.5	2486	5	-7	-14	2	14	multi-exon	FALSE	canonical	1	91083	junction_1	25310.05251253936	NA	4	NA	TRUE	NA	NA	NA	C	coding	204	615	102	716	45.0	-8	True	AATAAA	-27
PB.6831.6	chr2	-	2258	10	full-splice_match	METTL8	ENST00000612742.4	8132	10	28	5846	6	0	multi-exon	FALSE	canonical	1	11590	junction_9	45329.80672067038	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	114	1337	100.0	-3	True	NA	NA
PB.3181.10	chr13	-	3509	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-9	917	-3	-365	multi-exon	FALSE	canonical	1	198741	junction_13	56169.73506515711	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	38	1198	30.0	2	True	AGTAAA	-15
PB.3181.11	chr13	-	3425	13	novel_in_catalog	THSD1	novel	3050	4	NA	NA	-34255	-36323	no_combination_of_known_junctions	FALSE	canonical	1	4922	junction_6	105181.72165616779	NA	0	NA	TRUE	NA	NA	NA	B	coding	360	1083	35	1117	35.0	5	True	AGTAAA	-12
PB.3181.12	chr13	-	3294	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-14	1137	-8	-585	multi-exon	FALSE	canonical	1	198741	junction_13	56169.73506515711	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	43	1203	30.0	-3	True	AATACA	-21
PB.3181.13	chr13	-	3065	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-11	1363	-5	-811	multi-exon	FALSE	canonical	1	198741	junction_13	56169.73506515711	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	40	1200	60.0	0	True	TATAAA	-8
PB.3181.14	chr13	-	1712	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-16	2721	-10	202	multi-exon	FALSE	canonical	1	198741	junction_13	56169.73506515711	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	45	1205	55.0	-5	True	AATAAA	-9
PB.8233.2	chr3	-	2013	5	full-splice_match	FAM86DP	ENST00000478666.5	1068	5	-73	-872	-9	5	multi-exon	FALSE	canonical	1	40521	junction_3	24629.82115241603	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-50	False	NA	NA
PB.8233.1	chr3	-	2177	5	full-splice_match	FAM86DP	ENST00000478666.5	1068	5	-64	-1045	0	178	multi-exon	FALSE	canonical	1	40521	junction_3	24629.82115241603	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-41	False	AAGAAA	-17
PB.1117.8	chr1	-	4444	9	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-17	-276	combination_of_known_junctions	FALSE	canonical	1	65115	junction_8	54559.420971542575	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	389	1861	25.0	-24	True	ATTAAA	-22
PB.1402.2	chr10	+	10109	62	full-splice_match	WDFY4	ENST00000325239.11	10079	62	-31	1	-31	-1	multi-exon	FALSE	canonical	1	45574	junction_18	39874.7997381557	NA	1	NA	TRUE	NA	NA	NA	C	coding	3184	9555	175	9729	25.0	-621	False	ATTAAA	-20
PB.1402.3	chr10	+	7154	36	novel_in_catalog	WDFY4	novel	2193	11	NA	NA	-26	15	combination_of_known_junctions	FALSE	canonical	1	5492	junction_35	22990.51421470008	NA	0	NA	TRUE	NA	NA	NA	C	coding	2005	6018	170	6187	25.0	-1	True	ATTAAA	-39
PB.1402.1	chr10	+	10194	63	novel_not_in_catalog	WDFY4	novel	2193	11	NA	NA	-36	-1	any annotated donor/acceptor	TRUE	canonical	1	373	junction_1	43732.05509039086	NA	4	NA	TRUE	NA	NA	NA	C	coding	3184	9555	260	9814	25.0	-626	False	ATTAAA	-20
PB.1402.6	chr10	+	7116	36	novel_not_in_catalog	WDFY4	novel	2193	11	NA	NA	303	5	any annotated donor/acceptor	FALSE	canonical	1	5492	junction_35	25596.241233399236	NA	17	NA	TRUE	NA	NA	NA	C	coding	2045	6138	22	6159	25.0	-287	False	ATTAAA	-29
PB.1402.7	chr10	+	5913	31	novel_not_in_catalog	WDFY4	novel	2193	11	NA	NA	363	-10837	any annotated donor/acceptor	FALSE	canonical	1	409	junction_30	27976.368734284773	NA	3	1	TRUE	NA	NA	NA	C	coding	1818	5457	82	5538	30.0	25	True	AATAAA	-17
PB.1402.4	chr10	+	9851	61	novel_in_catalog	WDFY4	novel	2193	11	NA	NA	-25	-2	no_combination_of_known_junctions	FALSE	canonical	1	985	junction_1	41804.24992469865	NA	1	NA	TRUE	NA	NA	NA	C	coding	2991	8976	497	9472	20.0	0	True	ATTAAA	-19
PB.1402.5	chr10	+	10088	62	novel_not_in_catalog	WDFY4	novel	2193	11	NA	NA	291	-1	any annotated donor/acceptor	FALSE	canonical	1	12532	junction_1	41292.11984107417	NA	2	NA	TRUE	NA	NA	NA	C	coding	3224	9675	34	9708	25.0	-299	False	ATTAAA	-20
PB.5078.20	chr17	+	4758	6	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	0	-2	intron_retention	FALSE	canonical	1	504837	junction_1	625769.0534653818	NA	3	NA	TRUE	NA	NA	NA	C	coding	772	2319	596	2914	20.0	-2	True	AATAAA	-23
PB.8192.6	chr3	+	2878	4	novel_not_in_catalog	PDE12	novel	3040	2	NA	NA	-5	-392	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	109337.83134243457	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	110	1939	20.0	-16	True	NA	NA
PB.8192.5	chr3	+	3044	2	full-splice_match	PDE12	ENST00000487257.1	3040	2	-5	1	-5	-1	multi-exon	FALSE	canonical	1	217448	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	472	1419	110	1528	15.0	-16	True	AATAAA	-16
PB.8192.4	chr3	+	3138	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	-9	5644	-8	263	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	609	1830	113	1942	45.0	-19	True	CATAAA	-31
PB.5078.24	chr17	+	3793	5	novel_in_catalog	NFE2L1	novel	4774	6	NA	NA	-44	5	intron_retention	FALSE	canonical	1	9133	junction_1	793056.4232443916	NA	5	NA	TRUE	NA	NA	NA	C	coding	455	1368	575	1942	15.0	-3461	False	AATAAA	-30
PB.5078.25	chr17	+	3658	4	full-splice_match	NFE2L1	ENST00000580037.1	583	4	0	-3075	0	4	multi-exon	FALSE	canonical	1	9133	junction_1	881701.5920128532	NA	3	NA	TRUE	NA	NA	NA	C	coding	455	1368	441	1808	20.0	-1	True	AATAAA	-29
PB.5078.26	chr17	+	3120	4	full-splice_match	NFE2L1	ENST00000580037.1	583	4	0	-2537	0	-526	multi-exon	FALSE	canonical	1	9133	junction_1	881701.5920128532	NA	3	NA	TRUE	NA	NA	NA	C	coding	455	1368	441	1808	20.0	-1	True	CATAAA	-19
PB.11720.15	chr9	+	1754	9	novel_not_in_catalog	UGCG	novel	4007	9	NA	NA	843	-1793	any annotated donor/acceptor	FALSE	canonical	1	1558	junction_1	158673.82527196317	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	375	1175	70.0	877	False	TATAAA	-28
PB.8192.9	chr3	+	3982	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	-2	4793	-1	1114	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	609	1830	106	1935	30.0	-12	True	ATTAAA	-23
PB.8192.8	chr3	+	2169	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	-5	6609	-4	-702	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	109	1938	60.0	-15	True	AATATA	-13
PB.11720.14	chr9	+	3647	9	novel_in_catalog	UGCG	novel	4007	9	NA	NA	-23	-4	combination_of_known_junctions	FALSE	canonical	1	151	junction_2	160673.0517233969	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	479	1279	45.0	-13	True	AATAAA	-16
PB.11043.5	chr8	+	2433	14	full-splice_match	CDCA2	ENST00000380665.3	3565	14	0	1132	0	-1132	multi-exon	TRUE	canonical	1	128822	junction_2	21632.563486148574	NA	1	NA	TRUE	NA	NA	NA	C	coding	676	2028	404	2431	65.0	0	True	AATAAA	-9
PB.587.5	chr1	-	1559	5	novel_not_in_catalog	TAF13	novel	1076	5	NA	NA	-1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	224634.08072963907	NA	1	NA	TRUE	NA	NA	NA	A	coding	124	375	57	431	15.0	-1	True	AATAAA	-34
PB.9684.2	chr5	+	2659	6	full-splice_match	TRIM41	ENST00000315073.9	3637	6	975	3	99	0	multi-exon	FALSE	canonical	1	212931	junction_4	64250.24968854207	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	18	1628	5.0	-7118	False	AATAAA	-17
PB.6862.12	chr2	+	2928	11	novel_not_in_catalog	HNRNPA3	novel	2067	11	NA	NA	0	-108	any annotated donor/acceptor	FALSE	canonical	1	811	junction_3	165674.64824359823	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	52	1122	15.0	-45	False	ATTAAA	-11
PB.9684.1	chr5	+	2705	8	full-splice_match	TRIM41	ENST00000351937.9	2696	8	-9	0	-9	0	multi-exon	FALSE	canonical	1	34189	junction_6	114412.33834170303	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	720	2276	10.0	0	True	AATAAA	-19
PB.1438.1	chr10	+	2494	18	incomplete-splice_match	CCAR1	ENST00000265872.10	4683	25	19	21076	6	0	3prime_fragment	FALSE	canonical	1	362651	junction_1	103803.87785143933	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2394	101	2494	80.0	-6	True	NA	NA
PB.1117.1	chr1	-	4705	9	full-splice_match	ANGEL2	ENST00000366962.7	4649	9	-57	1	-57	-1	multi-exon	FALSE	canonical	1	69654	junction_8	53445.3273552457	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	213	1847	15.0	-30	False	AATAAA	-14
PB.1438.3	chr10	+	2117	16	incomplete-splice_match	CCAR1	ENST00000265872.10	4683	25	22	31271	-3	3808	3prime_fragment	FALSE	canonical	1	362651	junction_1	74045.82223701452	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2019	98	2116	70.0	-3	True	ATTAAA	-45
PB.1438.2	chr10	+	2324	17	full-splice_match	CCAR1	ENST00000541012.5	2432	17	-35	143	-22	0	multi-exon	FALSE	canonical	1	52118	junction_13	163623.29292165997	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	142	1848	80.0	-1350	False	NA	NA
PB.1438.5	chr10	+	2247	15	novel_in_catalog	CCAR1	novel	552	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1432	junction_3	218630.6583952647	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1809	439	2247	80.0	-25	True	NA	NA
PB.1438.4	chr10	+	2686	18	novel_not_in_catalog	CCAR1	novel	552	6	NA	NA	-2	6	any annotated donor/acceptor	FALSE	canonical	1	23132	junction_11	164587.50200997145	NA	14	2	TRUE	NA	NA	NA	C	coding	460	1383	122	1504	45.0	-27	True	GATAAA	-23
PB.1438.7	chr10	+	3322	17	novel_in_catalog	CCAR1	novel	552	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	362651	junction_1	106950.12902283008	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	119	2038	80.0	-24	True	NA	NA
PB.1438.6	chr10	+	2106	15	novel_in_catalog	CCAR1	novel	552	6	NA	NA	0	3808	no_combination_of_known_junctions	FALSE	canonical	1	3194	junction_4	158245.97576261213	NA	2	NA	TRUE	NA	NA	NA	C	coding	662	1986	120	2105	70.0	-25	True	ATTAAA	-45
PB.1438.9	chr10	+	2464	17	incomplete-splice_match	CCAR1	ENST00000539539.5	3224	22	-21	17015	2	0	3prime_fragment	FALSE	canonical	1	48332	junction_3	163762.7308155074	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2349	116	2464	80.0	-21	True	NA	NA
PB.1438.8	chr10	+	2636	18	novel_in_catalog	CCAR1	novel	552	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	19707	junction_1	159542.95074216087	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2394	243	2636	80.0	-24	True	NA	NA
PB.11720.10	chr9	+	1920	10	novel_in_catalog	UGCG	novel	4007	9	NA	NA	-39	-1793	combination_of_known_junctions	FALSE	canonical	1	13179	junction_3	184115.8094859501	NA	4	NA	TRUE	NA	NA	NA	C	coding	266	801	541	1341	70.0	-29	True	TATAAA	-28
PB.7792.1	chr22	-	3992	6	full-splice_match	CBX7	ENST00000216133.9	4081	6	76	13	-22	-13	multi-exon	FALSE	canonical	1	138670	junction_5	25233.957752203674	NA	3	NA	TRUE	NA	NA	NA	C	coding	251	756	131	886	60.0	3	True	ATTAAA	-20
PB.176.1	chr1	+	2676	5	full-splice_match	RCAN3	ENST00000538532.5	2640	5	-42	6	-42	-6	multi-exon	FALSE	canonical	1	16703	junction_1	62656.38824722903	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	215	940	25.0	-959	False	AATAAA	-17
PB.176.2	chr1	+	2683	5	novel_in_catalog	RCAN3	novel	2386	4	NA	NA	65	0	intron_retention	FALSE	canonical	1	18029	junction_1	62087.01519389944	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	216	941	20.0	-306	False	AATAAA	-23
PB.176.3	chr1	+	2691	5	full-splice_match	RCAN3	ENST00000374395.8	6802	5	90	4021	90	0	multi-exon	FALSE	canonical	1	33746	junction_1	55345.82778087252	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	224	949	20.0	-26	True	AATAAA	-23
PB.99.2	chr1	+	3131	20	novel_in_catalog	PLOD1	novel	991	9	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	1	6444	junction_1	431477.2854534296	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	76	2400	30.0	-20	True	ATTAAA	-17
PB.6321.5	chr2	-	3729	3	novel_in_catalog	AC064875.1	novel	1942	6	NA	NA	10	-2	intron_retention	FALSE	canonical	1	2415	junction_1	939.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-4	True	AATAAA	-14
PB.6862.15	chr2	+	3821	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	191	-1945	5	-1928	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	47	1183	35.0	-40	False	ATTAAA	-20
PB.5897.10	chr19	-	2221	4	novel_not_in_catalog	C19orf12	novel	4242	2	NA	NA	-9	-7	intron_retention	FALSE	canonical	1	957	junction_3	21709.22173230128	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	254	679	35.0	-3	True	AATAAA	-8
PB.6321.4	chr2	-	3045	4	novel_in_catalog	AC064875.1	novel	1942	6	NA	NA	13	-1	intron_retention	FALSE	canonical	1	2415	junction_1	796.2044684348083	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-15
PB.3094.1	chr13	+	4259	15	full-splice_match	B3GLCT	ENST00000343307.4	4254	15	-9	4	-9	-4	multi-exon	FALSE	canonical	1	24722	junction_1	15206.11976646379	NA	3	NA	TRUE	NA	NA	NA	C	coding	547	1644	12	1655	40.0	-48	False	ACTAAA	-22
PB.8223.2	chr3	-	4208	17	novel_not_in_catalog	FRMD4B	novel	5060	23	NA	NA	13024	-279	any annotated donor/acceptor	FALSE	canonical	1	7497	junction_16	37037.62529488594	NA	1	NA	TRUE	NA	NA	NA	B	coding	789	2370	247	2616	25.0	-3	True	AATAAA	-17
PB.1117.7	chr1	-	4547	8	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-27	-2	no_combination_of_known_junctions	FALSE	canonical	1	23313	junction_3	75001.43849940208	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	183	1328	15.0	0	True	AATAAA	-13
PB.8953.7	chr4	+	2132	11	full-splice_match	METTL14	ENST00000388822.9	6669	11	24	4513	-8	319	multi-exon	FALSE	canonical	1	154952	junction_6	26431.47776875141	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	144	1514	80.0	-1	True	NA	NA
PB.4629.2	chr16	+	2115	1	full-splice_match	MC1R	ENST00000555147.1	3099	1	983	1	983	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	317	954	398	1351	25.0	0	True	AATAAA	-24
PB.4629.1	chr16	+	3205	1	full-splice_match	MC1R	ENST00000555147.1	3099	1	-107	1	-107	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	17	NA	NA	NA	NA	NA	C	coding	317	954	1488	2441	25.0	-5573	False	AATAAA	-24
PB.3094.2	chr13	+	3423	14	novel_not_in_catalog	B3GLCT	novel	4254	15	NA	NA	-6	-756	any annotated donor/acceptor	FALSE	canonical	1	510	junction_1	27656.659726132882	NA	9	3	TRUE	NA	NA	NA	C	coding	103	312	1260	1571	30.0	-45	False	AGTAAA	-13
PB.10440.1	chr7	+	2199	12	full-splice_match	MPP6	ENST00000222644.9	8452	12	-52	6305	26	12	multi-exon	FALSE	canonical	1	37993	junction_1	53490.57825155707	NA	3	NA	TRUE	NA	NA	NA	A	coding	540	1623	303	1925	15.0	-3994	False	CATAAA	-26
PB.3029.10	chr12	-	2001	17	novel_in_catalog	CHFR	novel	581	6	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	1	30852	junction_12	89123.89432534266	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	74	1849	20.0	-3	True	NA	NA
PB.6.1	chr1	+	1661	7	novel_not_in_catalog	SAMD11	novel	2551	14	NA	NA	-304	-1	any annotated donor/acceptor	TRUE	canonical	1	812	junction_1	40814.27545874387	NA	0	NA	TRUE	NA	NA	NA	A	coding	401	1206	35	1240	5.0	4	True	AATAAA	-13
PB.11664.6	chr9	-	2164	14	novel_in_catalog	FANCC	novel	4592	15	NA	NA	5	416	no_combination_of_known_junctions	FALSE	canonical	1	5325	junction_8	22759.04414466254	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	240	1751	15.0	22	True	ATTAAA	-18
PB.11664.7	chr9	-	2351	15	full-splice_match	FANCC	ENST00000289081.8	4592	15	0	2241	0	415	multi-exon	FALSE	canonical	1	58532	junction_12	12498.585764895523	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	263	1939	15.0	-1	True	ATTAAA	-17
PB.11664.4	chr9	-	3162	15	full-splice_match	FANCC	ENST00000289081.8	4592	15	-4	1434	-4	1222	multi-exon	FALSE	canonical	1	58532	junction_12	12498.585764895523	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	267	1943	20.0	-5	True	NA	NA
PB.11664.5	chr9	-	2844	15	full-splice_match	FANCC	ENST00000289081.8	4592	15	-9	1757	-9	899	multi-exon	FALSE	canonical	1	58532	junction_12	12498.585764895523	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	272	1948	60.0	-10	True	NA	NA
PB.11664.2	chr9	-	4590	15	full-splice_match	FANCC	ENST00000289081.8	4592	15	0	2	0	-1	multi-exon	FALSE	canonical	1	58532	junction_12	12498.585764895523	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	263	1939	40.0	-1	True	NA	NA
PB.11664.3	chr9	-	4422	14	novel_in_catalog	FANCC	novel	4592	15	NA	NA	2	-2	no_combination_of_known_junctions	TRUE	canonical	1	5325	junction_8	22759.04414466254	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	261	1772	35.0	1	True	NA	NA
PB.11664.1	chr9	-	4733	16	novel_in_catalog	FANCC	novel	4592	15	NA	NA	2	-1	combination_of_known_junctions	TRUE	canonical	1	3923	junction_11	27357.71346975718	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	928	2082	40.0	1	True	NA	NA
PB.9495.1	chr5	-	2361	6	full-splice_match	HBEGF	ENST00000230990.6	2386	6	24	1	24	-1	multi-exon	TRUE	canonical	1	195911	junction_5	35798.572187169695	NA	0	NA	TRUE	NA	NA	NA	A	coding	208	627	280	906	5.0	-5	True	AATAAA	-18
PB.11664.8	chr9	-	2181	14	novel_not_in_catalog	FANCC	novel	4592	15	NA	NA	-3	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	23907.276610830137	NA	1	1	TRUE	NA	NA	NA	C	coding	492	1479	266	1744	40.0	-4	True	AATAAA	-13
PB.11664.9	chr9	-	2416	14	full-splice_match	FANCC	ENST00000490972.7	2387	14	-38	9	0	-9	multi-exon	FALSE	canonical	1	4561	junction_1	22876.14801671908	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	263	1741	55.0	-1	True	AATAAA	-9
PB.8787.3	chr4	+	2366	16	incomplete-splice_match	EXOC1	ENST00000349598.6	3248	18	-91	5236	-27	-4779	3prime_fragment	FALSE	canonical	1	38203	junction_1	73713.71147791222	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2205	161	2365	75.0	-91	True	NA	NA
PB.8787.2	chr4	+	3322	18	full-splice_match	EXOC1	ENST00000349598.6	3248	18	-91	17	-27	4	multi-exon	FALSE	canonical	1	38203	junction_1	80831.33822911775	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	161	2800	35.0	-91	True	AATAAA	-27
PB.8787.1	chr4	+	2810	18	full-splice_match	EXOC1	ENST00000349598.6	3248	18	-93	531	-29	-74	multi-exon	FALSE	canonical	1	38203	junction_1	80831.33822911775	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	163	2802	65.0	-93	True	ACTAAA	-8
PB.6478.12	chr2	+	3107	3	novel_not_in_catalog	VRK2	novel	2657	19	NA	NA	-2	-24259	any annotated donor/acceptor	FALSE	canonical	1	12776	junction_2	57798.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	23	True	AATAAA	-19
PB.6478.13	chr2	+	1837	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	73	1	combination_of_known_junctions	FALSE	canonical	1	53848	junction_12	100113.69601058293	NA	2	1	TRUE	NA	NA	NA	C	coding	396	1191	87	1277	45.0	-26	True	AATAAA	-16
PB.6478.10	chr2	+	3610	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	74	1722	intron_retention	FALSE	canonical	1	53848	junction_12	100113.69601058293	NA	1	1	TRUE	NA	NA	NA	C	coding	396	1191	86	1276	70.0	-25	True	AGTAAA	-8
PB.6478.11	chr2	+	2082	9	novel_in_catalog	VRK2	novel	2657	19	NA	NA	10	-26697	combination_of_known_junctions	FALSE	canonical	1	34560	junction_1	95991.2107317644	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	127	990	55.0	14	True	AATAAA	-17
PB.6478.16	chr2	+	2035	9	incomplete-splice_match	VRK2	ENST00000340157.8	1888	13	105	26783	-79	-26696	3prime_fragment	FALSE	canonical	1	128372	junction_1	68785.04917131338	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	79	942	50.0	-18	True	AATAAA	-18
PB.6478.17	chr2	+	3317	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	106	-1535	-78	1486	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	78	1604	45.0	-17	True	AATAAA	-21
PB.6478.14	chr2	+	3399	9	incomplete-splice_match	VRK2	ENST00000340157.8	1888	13	100	25424	76	-25337	3prime_fragment	FALSE	canonical	1	128372	junction_1	68785.04917131338	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	84	947	65.0	-23	True	NA	NA
PB.9859.3	chr6	+	2108	12	novel_in_catalog	GTF2H4	novel	1735	14	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	236965	junction_7	61127.221126066586	NA	1	1	TRUE	NA	NA	NA	C	coding	276	831	201	1031	5.0	0	True	AATAAA	-16
PB.104.3	chr1	+	2675	7	novel_in_catalog	PRDM2	novel	628	6	NA	NA	-10	-5	no_combination_of_known_junctions	FALSE	canonical	1	2965	junction_1	27160.05968789465	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	327	785	35.0	0	True	AATAAA	-23
PB.10051.9	chr6	+	2549	4	incomplete-splice_match	PHF3	ENST00000506783.5	3700	12	-16	14522	-16	2	3prime_fragment	FALSE	canonical	1	8120	junction_1	137207.41091743793	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2049	500	2548	75.0	2	True	NA	NA
PB.6478.18	chr2	+	4994	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	106	-3212	-78	3163	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	78	1604	80.0	-17	True	NA	NA
PB.6478.19	chr2	+	2246	9	incomplete-splice_match	VRK2	ENST00000340157.8	1888	13	107	26570	-77	-26483	3prime_fragment	FALSE	canonical	1	128372	junction_1	68785.04917131338	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	77	940	25.0	-16	True	AATAAA	-20
PB.104.7	chr1	+	2270	9	novel_not_in_catalog	PRDM2	novel	628	6	NA	NA	-7	3425	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	67675.22665458905	NA	2	1	TRUE	NA	NA	NA	C	coding	331	996	134	1129	60.0	0	True	ATTAAA	-4
PB.104.6	chr1	+	6254	8	novel_in_catalog	PRDM2	novel	628	6	NA	NA	-3	-22	no_combination_of_known_junctions	FALSE	canonical	1	2965	junction_1	66922.72554192024	NA	2	NA	TRUE	NA	NA	NA	C	coding	1608	4827	320	5146	70.0	7	True	TATAAA	-17
PB.104.5	chr1	+	6699	8	novel_in_catalog	PRDM2	novel	628	6	NA	NA	-3	1	no_combination_of_known_junctions	FALSE	canonical	1	2965	junction_1	66922.72554192024	NA	7	NA	TRUE	NA	NA	NA	C	coding	1608	4827	320	5146	25.0	7	True	AATAAA	-16
PB.104.4	chr1	+	6767	9	novel_in_catalog	PRDM2	novel	628	6	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	1	4425	junction_1	67185.84662605193	NA	5	NA	TRUE	NA	NA	NA	C	coding	1682	5049	173	5221	40.0	6	True	AATAAA	-9
PB.803.2	chr1	+	2162	8	full-splice_match	RUSC1	ENST00000490373.5	1700	8	-80	-382	1	0	multi-exon	FALSE	canonical	1	94512	junction_1	144645.15417957373	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	995	1621	15.0	-6281	False	AATAAA	-13
PB.9859.1	chr6	+	1981	13	novel_in_catalog	GTF2H4	novel	1735	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	236965	junction_7	60505.302768239984	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	225	1055	5.0	-24	True	AATAAA	-16
PB.6862.16	chr2	+	5580	11	full-splice_match	HNRNPA3	ENST00000411529.6	5688	11	7	101	7	-101	multi-exon	FALSE	canonical	1	811	junction_3	190633.34146956034	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	45	1115	10.0	-38	False	ATTAAA	-18
PB.8787.4	chr4	+	3534	19	full-splice_match	EXOC1	ENST00000381295.6	3551	19	33	-16	-26	-5	multi-exon	FALSE	canonical	1	78464	junction_10	84679.2296755494	NA	1	NA	TRUE	NA	NA	NA	C	coding	894	2685	316	3000	25.0	-90	True	AATAAA	-39
PB.4293.3	chr16	-	3589	9	novel_not_in_catalog	ERI2	novel	1479	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1012	junction_8	44966.711680524015	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	413	2209	35.0	-1	True	AATAAA	-17
PB.9318.4	chr5	-	4930	12	full-splice_match	SERINC5	ENST00000507668.6	6479	12	-6	1555	-6	-1555	multi-exon	FALSE	canonical	1	127420	junction_11	66499.1612459377	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	164	1549	25.0	-40	True	NA	NA
PB.9318.5	chr5	-	4633	12	full-splice_match	SERINC5	ENST00000507668.6	6479	12	28	1818	28	-1818	multi-exon	FALSE	canonical	1	127420	junction_11	66499.1612459377	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	130	1515	50.0	-6	True	AAAAAG	-18
PB.9318.6	chr5	-	2677	12	full-splice_match	SERINC5	ENST00000507668.6	6479	12	28	3774	28	-3774	multi-exon	FALSE	canonical	1	127420	junction_11	66499.1612459377	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	130	1515	40.0	-6	True	AATATA	-4
PB.4293.2	chr16	-	3729	10	full-splice_match	ERI2	ENST00000563117.5	2903	10	204	-1030	0	0	multi-exon	FALSE	canonical	1	15351	junction_9	42879.613438291206	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	553	2349	35.0	-1	True	AATAAA	-17
PB.9318.1	chr5	-	6478	12	full-splice_match	SERINC5	ENST00000507668.6	6479	12	-2	3	-2	-3	multi-exon	FALSE	canonical	1	127420	junction_11	66499.1612459377	NA	3	NA	TRUE	NA	NA	NA	C	coding	461	1386	160	1545	40.0	-36	True	NA	NA
PB.9318.2	chr5	-	6293	12	full-splice_match	SERINC5	ENST00000507668.6	6479	12	12	174	12	-174	multi-exon	FALSE	canonical	1	127420	junction_11	66499.1612459377	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	146	1531	25.0	-22	True	AATAAA	-8
PB.10051.8	chr6	+	6514	15	novel_in_catalog	PHF3	novel	3700	12	NA	NA	-16	-455	combination_of_known_junctions	FALSE	canonical	1	98851	junction_1	68254.37219115844	NA	0	NA	TRUE	NA	NA	NA	C	coding	1951	5856	368	6223	20.0	2	True	AATAAA	-15
PB.8779.23	chr4	+	2108	18	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	221999.11432294728	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	199	1941	30.0	-2	True	AATAAA	-25
PB.4293.5	chr16	-	3498	9	full-splice_match	ERI2	ENST00000357967.8	3499	9	1	0	0	0	multi-exon	FALSE	canonical	1	25633	junction_8	38078.39686341194	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	43	2118	35.0	-1	True	AATAAA	-17
PB.8779.21	chr4	+	3357	15	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	183	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	235652.383555466	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	199	1482	85.0	-2	True	NA	NA
PB.8779.20	chr4	+	3452	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	183	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	235198.9002161256	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	199	1857	85.0	-2	True	NA	NA
PB.5712.2	chr19	+	2771	15	incomplete-splice_match	DNM2	ENST00000408974.8	3013	20	64750	-479	-58	0	5prime_fragment	FALSE	canonical	1	274022	junction_4	369794.517691534	NA	0	NA	TRUE	NA	NA	NA	B	coding	599	1800	116	1915	0.0	3429	False	AATAAA	-29
PB.5712.3	chr19	+	2431	13	novel_not_in_catalog	DNM2	novel	2774	21	NA	NA	-1947	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	447541.9537586129	NA	3	1	TRUE	NA	NA	NA	B	coding	307	924	653	1576	0.0	-4158	False	AATAAA	-28
PB.8779.25	chr4	+	5107	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	1826	intron_retention	FALSE	canonical	1	199597	junction_1	201210.13564651483	NA	2	NA	TRUE	NA	NA	NA	C	coding	556	1671	199	1869	50.0	-2	True	AATAAA	-20
PB.4293.4	chr16	-	3547	9	novel_not_in_catalog	ERI2	novel	1479	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	4882	junction_1	57048.76762020697	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	887	2167	35.0	-1	True	AATAAA	-17
PB.9800.1	chr6	+	2979	10	novel_in_catalog	BTN3A3	novel	671	4	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	1	14968	junction_6	45895.50801898795	NA	4	NA	TRUE	NA	NA	NA	C	coding	575	1728	250	1977	10.0	-32	False	AATAAA	-16
PB.4293.7	chr16	-	3017	9	novel_in_catalog	ERI2	novel	1479	11	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2473	junction_8	47790.6185583269	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	697	1257	35.0	-15	True	AATAAA	-17
PB.6019.5	chr19	-	2569	5	novel_not_in_catalog	DMAC2	novel	1454	4	NA	NA	0	-5	intron_retention	FALSE	canonical	1	9580	junction_2	179095.33237775907	NA	2	NA	TRUE	NA	NA	NA	C	coding	102	309	12	320	15.0	-1	True	NA	NA
PB.6019.4	chr19	-	1534	5	full-splice_match	DMAC2	ENST00000589970.5	979	5	-3	-552	-1	-1	multi-exon	FALSE	canonical	1	116961	junction_4	112805.18303473471	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	13	570	5.0	-2	True	NA	NA
PB.6019.3	chr19	-	1697	6	full-splice_match	DMAC2	ENST00000221943.13	1692	6	-5	0	0	0	multi-exon	FALSE	canonical	1	116961	junction_5	109732.53544687647	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	12	785	5.0	-1	True	NA	NA
PB.6019.2	chr19	-	2674	4	novel_not_in_catalog	DMAC2	novel	1454	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	9580	junction_1	167794.1488034272	NA	3	NA	TRUE	NA	NA	NA	C	coding	102	309	10	318	5.0	1	True	NA	NA
PB.6019.1	chr19	-	2576	5	novel_in_catalog	DMAC2	novel	1454	4	NA	NA	11	0	intron_retention	FALSE	canonical	1	116961	junction_4	121269.86768463961	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	27	626	0.0	-16	True	NA	NA
PB.9674.3	chr5	-	2907	3	incomplete-splice_match	RNF130	ENST00000261947.4	1766	8	335	55458	-45	-34137	3prime_fragment	FALSE	canonical	1	755185	junction_2	112706.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	65	820	20.0	-39	True	NA	NA
PB.9674.2	chr5	-	1512	6	novel_in_catalog	RNF130	novel	9945	8	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	1	11071	junction_1	486551.48508703575	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	52	924	20.0	-26	True	AATAAA	-23
PB.9674.1	chr5	-	1446	9	full-splice_match	RNF130	ENST00000521389.5	2263	9	378	439	-19	-26	multi-exon	FALSE	canonical	1	755185	junction_8	211792.19062326165	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	39	1298	80.0	-13	True	CATAAA	-26
PB.11043.2	chr8	+	2311	15	full-splice_match	CDCA2	ENST00000330560.7	3731	15	225	1195	23	-1148	multi-exon	FALSE	canonical	1	128822	junction_3	20852.22559452343	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2058	253	2310	70.0	-11	True	AATATA	-14
PB.99.1	chr1	+	2880	18	novel_in_catalog	PLOD1	novel	991	9	NA	NA	-5	1	no_combination_of_known_junctions	FALSE	canonical	1	4012	junction_11	382153.71672446845	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	92	2149	30.0	-36	True	ATTAAA	-17
PB.11595.4	chr9	-	10053	8	full-splice_match	PTAR1	ENST00000340434.4	1417	8	-27	-8609	-10	-7	multi-exon	TRUE	canonical	1	41017	junction_1	44301.9863524821	NA	29	NA	TRUE	NA	NA	NA	C	coding	402	1209	32	1240	40.0	-17	True	AGTAAA	-14
PB.7142.1	chr20	+	2593	23	novel_not_in_catalog	VPS16	novel	2750	24	NA	NA	0	-1	any annotated donor/acceptor	TRUE	canonical	1	1167	junction_8	140953.0087413887	NA	2	1	TRUE	NA	NA	NA	C	coding	787	2364	73	2436	25.0	0	True	AATAAA	-14
PB.7142.3	chr20	+	2854	21	novel_not_in_catalog	VPS16	novel	2750	24	NA	NA	9	1	intron_retention	FALSE	canonical	1	14764	junction_8	142237.67284734204	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	64	882	20.0	9	True	AATAAA	-16
PB.7142.2	chr20	+	2840	23	novel_in_catalog	VPS16	novel	2750	24	NA	NA	6	0	intron_retention	FALSE	canonical	1	217081	junction_1	114731.69936608517	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	67	2682	20.0	6	True	AATAAA	-15
PB.7142.4	chr20	+	2720	24	full-splice_match	VPS16	ENST00000380445.7	2750	24	31	-1	-26	1	multi-exon	FALSE	canonical	1	217081	junction_1	116540.63650913628	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	42	2561	20.0	-21	True	AATAAA	-16
PB.5629.1	chr19	-	500	6	full-splice_match	MYDGF	ENST00000262947.7	1018	6	8	510	0	-510	multi-exon	TRUE	canonical	1	2018588	junction_5	510033.83723709936	NA	0	NA	TRUE	NA	NA	NA	A	coding	157	471	29	499	20.0	-21	True	NA	NA
PB.481.1	chr1	+	5823	1	novel_in_catalog	ST6GALNAC3	novel	6861	5	NA	NA	91	-332371	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	130	393	58	450	85.0	-3	True	NA	NA
PB.11595.6	chr9	-	4664	7	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-92	2940	intron_retention	FALSE	canonical	1	100496	junction_6	24453.38416934011	NA	3	NA	TRUE	NA	NA	NA	C	coding	429	1290	114	1403	30.0	-1	True	ATTAAA	-32
PB.10524.6	chr7	-	1769	4	full-splice_match	TMED4	ENST00000481238.1	1755	4	-12	-2	-2	2	multi-exon	FALSE	canonical	1	1050132	junction_3	116607.53453739124	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	38	598	25.0	-13	True	AATAAA	-29
PB.11595.9	chr9	-	4407	6	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-5	2940	intron_retention	FALSE	canonical	1	18160	junction_5	57376.696044997225	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	397	1146	30.0	-12	True	ATTAAA	-32
PB.10524.4	chr7	-	2108	4	full-splice_match	TMED4	ENST00000289577.9	2203	4	91	4	14	-4	multi-exon	FALSE	canonical	1	21901	junction_1	516107.2630699509	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	24	527	15.0	34	True	ATTAAA	-19
PB.10524.5	chr7	-	1865	5	full-splice_match	TMED4	ENST00000457408.6	2322	5	38	419	10	-419	multi-exon	FALSE	canonical	1	969251	junction_1	137861.8694425239	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	16	699	30.0	9	True	AATAAA	-11
PB.10524.3	chr7	-	2290	5	novel_in_catalog	TMED4	novel	2322	5	NA	NA	-7	-4	no_combination_of_known_junctions	FALSE	canonical	1	2792	junction_4	517153.90911573655	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	203	709	15.0	-18	True	ATTAAA	-19
PB.10524.1	chr7	-	2272	5	full-splice_match	TMED4	ENST00000457408.6	2322	5	48	2	-1	-2	multi-exon	FALSE	canonical	1	969251	junction_1	137861.8694425239	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	39	689	15.0	19	True	ATTAAA	-21
PB.618.4	chr1	-	1950	15	full-splice_match	ST7L	ENST00000358039.8	4528	15	288	2290	-4	68	multi-exon	FALSE	canonical	1	43034	junction_1	39294.57786062726	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	18	1745	15.0	-6	True	AAAAAG	-15
PB.6831.9	chr2	-	1937	11	novel_in_catalog	METTL8	novel	8132	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	18027	junction_10	44274.86011733973	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	330	1553	20.0	696	False	AGTAAA	-16
PB.8580.18	chr3	-	1810	1	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	-1832	113	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	4563	False	NA	NA
PB.6754.10	chr2	+	4494	24	full-splice_match	RAB3GAP1	ENST00000264158.12	4914	24	24	396	-9	321	multi-exon	FALSE	canonical	1	260691	junction_1	91662.69893135355	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	20	2965	15.0	-4	True	AATAAA	-40
PB.6715.6	chr2	+	3038	25	full-splice_match	EPB41L5	ENST00000263713.9	6628	25	72	3518	0	-260	multi-exon	FALSE	canonical	1	60072	junction_24	50267.92152927416	NA	1	NA	TRUE	NA	NA	NA	C	coding	720	2163	182	2344	25.0	0	True	AATAAA	-20
PB.8879.2	chr4	+	4797	26	novel_not_in_catalog	AC098582.1	novel	582	5	NA	NA	68621	58688	any annotated donor/acceptor	FALSE	canonical	1	4673	junction_5	61245.04339995523	NA	1	1	TRUE	NA	NA	NA	B	coding	996	2991	232	3222	35.0	-52	True	AATAAA	-17
PB.694.3	chr1	+	5963	10	novel_in_catalog	BCL9	novel	6278	10	NA	NA	89	-4	combination_of_known_junctions	FALSE	canonical	1	32811	junction_5	43245.73215109152	NA	1	NA	TRUE	NA	NA	NA	C	coding	1352	4059	652	4710	30.0	0	True	AATAAA	-17
PB.694.2	chr1	+	3640	8	novel_in_catalog	BCL9	novel	6278	10	NA	NA	89	-4850	combination_of_known_junctions	FALSE	canonical	1	32811	junction_5	41052.007124860436	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	652	3417	25.0	0	True	AATAAA	-15
PB.2437.1	chr12	+	2183	1	novel_in_catalog	C12orf57	novel	640	3	NA	NA	2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	105	318	1787	2104	10.0	2	True	AATAAA	-15
PB.10353.18	chr7	+	4051	21	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	-4	-5	any annotated donor/acceptor	FALSE	canonical	1	7518	junction_6	234836.35568337265	NA	0	NA	TRUE	NA	NA	NA	B	coding	810	2433	56	2488	45.0	-4	True	AATAAA	-14
PB.694.7	chr1	+	5920	10	novel_not_in_catalog	BCL9	novel	6278	10	NA	NA	-25	-4	any annotated donor/acceptor	FALSE	canonical	1	25323	junction_9	48622.87279196089	NA	3	NA	TRUE	NA	NA	NA	C	coding	1340	4023	645	4667	30.0	-8181	False	AATAAA	-17
PB.694.6	chr1	+	6216	10	novel_in_catalog	BCL9	novel	6278	10	NA	NA	-63	-4	combination_of_known_junctions	FALSE	canonical	1	34069	junction_1	34354.28541420979	NA	5	NA	TRUE	NA	NA	NA	C	coding	1426	4281	683	4963	30.0	-22	True	AATAAA	-17
PB.487.8	chr1	-	2429	22	novel_in_catalog	FUBP1	novel	605	2	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	28993	junction_3	442840.2468458818	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	110	2110	25.0	-4	True	AATAAA	-18
PB.694.4	chr1	+	6183	10	full-splice_match	BCL9	ENST00000234739.7	6278	10	91	4	91	-4	multi-exon	FALSE	canonical	1	35366	junction_1	34002.69159861639	NA	2	NA	TRUE	NA	NA	NA	C	coding	1426	4281	650	4930	30.0	2	True	AATAAA	-17
PB.8376.1	chr3	-	1209	6	full-splice_match	MGLL	ENST00000398101.7	1414	6	205	0	205	0	multi-exon	FALSE	canonical	1	48434	junction_5	202714.95264493936	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	295	1128	95.0	8155	False	NA	NA
PB.694.9	chr1	+	6098	10	novel_not_in_catalog	BCL9	novel	6278	10	NA	NA	20	-3	any annotated donor/acceptor	FALSE	canonical	1	25323	junction_9	43649.2353095803	NA	4	NA	TRUE	NA	NA	NA	C	coding	1414	4245	600	4844	25.0	-23	True	AATAAA	-18
PB.694.8	chr1	+	3606	8	novel_in_catalog	BCL9	novel	6278	10	NA	NA	2	-4850	combination_of_known_junctions	FALSE	canonical	1	32811	junction_5	41327.43521078995	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	618	3383	25.0	-8154	False	AATAAA	-15
PB.7544.2	chr21	-	3488	6	incomplete-splice_match	HSF2BP	ENST00000291560.6	1899	9	8	98540	8	-13881	3prime_fragment	FALSE	canonical	1	9232	junction_5	3402.2581089623404	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	325	918	45.0	-19	True	NA	NA
PB.7544.1	chr21	-	1912	9	full-splice_match	HSF2BP	ENST00000291560.6	1899	9	-12	-1	-12	1	multi-exon	FALSE	canonical	1	9232	junction_8	3327.5475484957387	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	345	1349	25.0	-39	True	AATAAA	-21
PB.5247.9	chr17	-	1877	6	full-splice_match	GRB2	ENST00000316804.9	3248	6	-18	1389	10	14	multi-exon	FALSE	canonical	1	767465	junction_5	342016.14938093204	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	321	974	85.0	2	True	NA	NA
PB.5247.8	chr17	-	3153	6	full-splice_match	GRB2	ENST00000316804.9	3248	6	-19	114	9	-114	multi-exon	FALSE	canonical	1	767465	junction_5	342016.14938093204	NA	4	NA	TRUE	NA	NA	NA	C	coding	217	654	322	975	60.0	1	True	NA	NA
PB.5247.5	chr17	-	3168	6	novel_not_in_catalog	GRB2	novel	359	3	NA	NA	-37	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	633295.0278615489	NA	13	1	TRUE	NA	NA	NA	C	coding	217	654	224	877	10.0	-73	False	AATAAA	-18
PB.5247.4	chr17	-	3103	5	novel_in_catalog	GRB2	novel	359	3	NA	NA	3	-1	intron_retention	FALSE	canonical	1	8322	junction_1	701715.9386127605	NA	3	NA	TRUE	NA	NA	NA	C	coding	156	471	328	798	10.0	-5	True	AATAAA	-18
PB.881.2	chr1	+	2132	8	full-splice_match	FCGR2B	ENST00000358671.9	2115	8	-18	1	-4	-1	multi-exon	FALSE	canonical	1	10	junction_1	81404.39552515777	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	100	1032	35.0	NA	False	AATAAA	-19
PB.5089.9	chr17	+	2342	4	full-splice_match	UBE2Z	ENST00000506271.1	864	4	421	-1899	421	0	multi-exon	FALSE	canonical	1	901857	junction_2	72835.66106425249	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	6	422	25.0	69	False	AATAAA	-15
PB.9021.1	chr4	+	3833	17	novel_not_in_catalog	DCLK2	novel	4265	16	NA	NA	-203	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	44284.66555453867	NA	2	NA	TRUE	NA	NA	NA	A	coding	696	2091	243	2333	15.0	-17	True	AATAAA	-37
PB.5247.2	chr17	-	3227	6	full-splice_match	GRB2	ENST00000316804.9	3248	6	-55	76	1	-76	multi-exon	FALSE	canonical	1	767465	junction_5	342016.14938093204	NA	26	NA	TRUE	NA	NA	NA	C	coding	217	654	358	1011	25.0	-35	True	AATAAA	-13
PB.5356.2	chr18	-	2395	21	full-splice_match	THOC1	ENST00000261600.10	2087	21	-34	-274	-11	273	multi-exon	FALSE	canonical	1	151893	junction_18	92910.84706603154	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	43	2016	20.0	-17	True	NA	NA
PB.5356.3	chr18	-	2326	20	full-splice_match	THOC1	ENST00000579232.5	2277	20	-49	0	-18	0	multi-exon	FALSE	canonical	1	151893	junction_17	95188.60662991156	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	1375	2220	10.0	758	False	AATAAA	-15
PB.5356.6	chr18	-	6489	18	novel_in_catalog	THOC1	novel	2277	20	NA	NA	-7	0	intron_retention	FALSE	canonical	1	151893	junction_15	95420.73020345501	NA	10	NA	TRUE	NA	NA	NA	C	coding	281	846	5540	6385	20.0	-13	True	AATAAA	-13
PB.5356.7	chr18	-	2104	21	full-splice_match	THOC1	ENST00000261600.10	2087	21	-21	4	2	-3	multi-exon	FALSE	canonical	1	151893	junction_18	92910.84706603154	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	30	2003	30.0	-4	True	AATAAA	-10
PB.5356.4	chr18	-	2324	20	novel_in_catalog	THOC1	novel	2277	20	NA	NA	0	0	intron_retention	FALSE	canonical	1	22003	junction_6	108594.52165459629	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	1352	2218	10.0	-1	True	AATAAA	-15
PB.5356.5	chr18	-	3833	21	novel_in_catalog	THOC1	novel	2277	20	NA	NA	0	0	intron_retention	FALSE	canonical	1	23469	junction_10	120701.32116463142	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	2883	3728	15.0	-1	True	AATAAA	-14
PB.5356.8	chr18	-	2121	21	novel_in_catalog	THOC1	novel	2277	20	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	22003	junction_6	105848.53942809037	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	28	2022	35.0	-2	True	AATAAA	-8
PB.5356.9	chr18	-	2246	3	full-splice_match	THOC1	ENST00000580870.5	552	3	-16	-1678	-8	231	multi-exon	FALSE	canonical	1	174059	junction_2	21555.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	9	True	NA	NA
PB.9106.5	chr4	-	2155	9	novel_not_in_catalog	TRIML2	novel	1639	7	NA	NA	4	23	any annotated donor/acceptor	FALSE	canonical	1	215	junction_4	20696.54264001599	NA	1	NA	TRUE	NA	NA	NA	B	coding	216	651	577	1227	20.0	3	False	AATAAA	-36
PB.1153.6	chr1	+	2502	6	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-22	1655	any annotated donor/acceptor	FALSE	canonical	1	44	junction_2	2348.5379792543276	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-26	True	ATTAAA	-12
PB.3194.2	chr13	-	2223	1	incomplete-splice_match	KLF12	ENST00000377669.6	10637	7	306731	7	306731	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	NA	False	AATAAA	-14
PB.3194.3	chr13	-	2801	1	incomplete-splice_match	KLF12	ENST00000377669.6	10637	7	304671	1489	304671	-1489	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.3194.5	chr13	-	3016	9	novel_not_in_catalog	KLF12	novel	10637	7	NA	NA	-139927	-8198	any annotated donor/acceptor	FALSE	canonical	1	230	junction_8	30455.145217752204	NA	2	NA	TRUE	NA	NA	NA	B	coding	377	1134	680	1813	30.0	-561	False	ATTAAA	-18
PB.7257.1	chr20	-	2033	12	novel_not_in_catalog	EDEM2	novel	1919	11	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	12210	junction_1	109474.64914960793	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	73	1404	20.0	-3	True	AATAAA	-18
PB.3194.8	chr13	-	2635	5	novel_not_in_catalog	KLF12	novel	10637	7	NA	NA	-139300	-117587	any annotated donor/acceptor	FALSE	canonical	1	869	junction_1	28001.965368523688	NA	7	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-10	True	AATAAA	-15
PB.7043.18	chr2	-	2426	11	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	30	junction_9	857915.031394042	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	528	1721	45.0	-3	True	AATAAA	-15
PB.627.22	chr1	-	2690	20	full-splice_match	PTPN22	ENST00000420377.6	2726	20	-19	55	5	-55	multi-exon	FALSE	canonical	1	56189	junction_13	30259.882750833367	NA	1	NA	TRUE	NA	NA	NA	C	coding	795	2388	109	2496	25.0	-20	True	AATAAA	-12
PB.627.23	chr1	-	2671	20	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	3	-9	any annotated donor/acceptor	FALSE	canonical	1	11699	junction_5	37706.822662289094	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	128	2431	35.0	-39	True	AATAAA	-17
PB.6338.17	chr2	-	6191	21	novel_in_catalog	PUM2	novel	6112	20	NA	NA	5	-52	combination_of_known_junctions	FALSE	canonical	1	51244	junction_19	238799.7020406171	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	561	3350	30.0	-12	True	TATAAA	-36
PB.9106.2	chr4	-	3870	6	novel_not_in_catalog	TRIML2	novel	1639	7	NA	NA	0	23	intron_retention	FALSE	canonical	1	6552	junction_5	17817.046751917107	NA	1	NA	TRUE	NA	NA	NA	B	coding	221	666	584	1249	20.0	-1	True	AATAAA	-36
PB.1042.4	chr1	-	3167	11	novel_in_catalog	KLHL12	novel	3359	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	33021	junction_1	47379.973012339295	NA	2	NA	TRUE	NA	NA	NA	C	coding	471	1416	231	1646	30.0	-40	True	ATTAAA	-21
PB.1651.1	chr10	-	2564	1	genic	PDCD4-AS1	novel	NA	NA	NA	NA	-78	120	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-20
PB.8260.45	chr3	-	3262	1	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	-3718	-1045	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	217	654	1708	2361	70.0	6756	False	NA	NA
PB.1732.8	chr11	+	2504	9	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	-18	-5	intron_retention	FALSE	canonical	1	619342	junction_1	138677.1778087512	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	74	1510	50.0	-19	True	AATAAA	-15
PB.12291.9	chrX	+	2710	9	full-splice_match	HTATSF1	ENST00000218364.4	2775	9	61	4	61	0	multi-exon	FALSE	canonical	1	517110	junction_7	78043.30515809797	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	114	2381	45.0	-102	False	AATAAA	-27
PB.12291.8	chrX	+	3018	9	full-splice_match	HTATSF1	ENST00000218364.4	2775	9	34	-277	34	277	multi-exon	FALSE	canonical	1	517110	junction_7	78043.30515809797	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	141	2408	25.0	-129	False	ATTAAA	-26
PB.10650.1	chr7	-	3998	12	full-splice_match	SLC25A40	ENST00000341119.9	4045	12	50	-3	6	3	multi-exon	FALSE	canonical	1	121255	junction_10	47449.18031252572	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	298	1314	30.0	1	True	AATAAA	-21
PB.6920.4	chr2	-	4874	28	full-splice_match	ANKRD44	ENST00000647377.1	7218	28	-134	2478	0	-1665	multi-exon	FALSE	canonical	1	50026	junction_1	39916.89022987816	NA	2	NA	TRUE	NA	NA	NA	C	coding	1056	3171	177	3347	75.0	-1	True	NA	NA
PB.12291.3	chrX	+	2638	10	novel_in_catalog	HTATSF1	novel	3019	10	NA	NA	-110	-7	combination_of_known_junctions	FALSE	canonical	1	45609	junction_1	203599.29690781847	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	49	2316	40.0	-273	False	AATAAA	-20
PB.12291.2	chrX	+	2157	10	full-splice_match	HTATSF1	ENST00000535601.5	3019	10	141	721	-1	-721	multi-exon	FALSE	canonical	1	92723	junction_1	189868.94738857233	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1875	282	2156	55.0	-16	True	NA	NA
PB.12291.1	chrX	+	2052	10	full-splice_match	HTATSF1	ENST00000535601.5	3019	10	137	830	-5	-830	multi-exon	TRUE	canonical	1	92723	junction_1	189868.94738857233	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1767	286	2052	60.0	-20	True	NA	NA
PB.1732.3	chr11	+	2785	11	novel_not_in_catalog	RIC8A	novel	3703	10	NA	NA	168	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	280072.85405210196	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	433	2028	45.0	-8390	False	AATAAA	-14
PB.12291.7	chrX	+	2006	9	full-splice_match	HTATSF1	ENST00000218364.4	2775	9	43	726	43	-722	multi-exon	FALSE	canonical	1	517110	junction_7	78043.30515809797	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1875	132	2006	55.0	1	True	NA	NA
PB.2427.1	chr12	+	3063	10	full-splice_match	CD4	ENST00000011653.8	3114	10	19	32	19	-32	multi-exon	FALSE	canonical	1	141385	junction_5	38453.829707011006	NA	0	NA	TRUE	NA	NA	NA	A	coding	458	1377	240	1616	70.0	-7	True	NA	NA
PB.12291.5	chrX	+	1986	10	novel_in_catalog	HTATSF1	novel	3019	10	NA	NA	-4	-830	combination_of_known_junctions	FALSE	canonical	1	45609	junction_1	203599.29690781847	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1767	220	1986	60.0	-6	True	NA	NA
PB.12291.4	chrX	+	2868	10	full-splice_match	HTATSF1	ENST00000535601.5	3019	10	151	0	-4	0	multi-exon	FALSE	canonical	1	92723	junction_1	189868.94738857233	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	272	2539	45.0	-6	True	AATAAA	-27
PB.1042.5	chr1	-	5271	11	novel_in_catalog	KLHL12	novel	3359	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	63468	junction_3	41964.23430541775	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	219	1022	30.0	-28	True	ATTAAA	-21
PB.7532.8	chr21	-	5272	14	full-splice_match	C2CD2	ENST00000380486.3	6345	14	-108	1181	-108	380	multi-exon	FALSE	canonical	1	60125	junction_13	23224.844034737238	NA	5	NA	TRUE	NA	NA	NA	C	coding	696	2091	351	2441	15.0	19	False	GATAAA	-44
PB.7532.9	chr21	-	4878	14	full-splice_match	C2CD2	ENST00000380486.3	6345	14	-94	1561	-94	0	multi-exon	FALSE	canonical	1	60125	junction_13	23224.844034737238	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	337	2427	70.0	0	True	NA	NA
PB.7532.6	chr21	-	4344	10	novel_in_catalog	C2CD2	novel	4559	3	NA	NA	890	498	combination_of_known_junctions	FALSE	canonical	1	4098	junction_2	37220.16616112465	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	250	1395	30.0	8547	False	TTTAAA	-21
PB.7532.7	chr21	-	5426	14	full-splice_match	C2CD2	ENST00000380486.3	6345	14	-144	1063	-144	498	multi-exon	FALSE	canonical	1	60125	junction_13	23224.844034737238	NA	3	NA	TRUE	NA	NA	NA	C	coding	696	2091	387	2477	30.0	-17	False	TTTAAA	-21
PB.6638.3	chr2	-	5200	21	full-splice_match	KANSL3	ENST00000354204.10	5253	21	22	31	0	-27	multi-exon	FALSE	canonical	1	50324	junction_19	79394.80748693518	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	415	2790	70.0	-13	True	NA	NA
PB.7532.1	chr21	-	6462	14	full-splice_match	C2CD2	ENST00000380486.3	6345	14	-116	-1	-116	1	multi-exon	FALSE	canonical	1	60125	junction_13	23224.844034737238	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	359	2449	15.0	11	True	AATAAA	-20
PB.7532.2	chr21	-	5856	13	full-splice_match	C2CD2	ENST00000329623.11	5844	13	-11	-1	-11	1	multi-exon	FALSE	canonical	1	3630	junction_12	34539.18771995321	NA	9	NA	TRUE	NA	NA	NA	C	coding	541	1626	218	1843	15.0	-11	True	AATAAA	-20
PB.8616.22	chr3	-	5219	18	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1098325	junction_8	281685.27122784726	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	72	1553	25.0	-1	True	AATAAA	-15
PB.860.26	chr1	+	2203	4	full-splice_match	SLAMF7	ENST00000444090.6	2393	4	192	-2	2	2	multi-exon	FALSE	canonical	1	2658	junction_2	244003.76627147922	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	54	551	40.0	2	True	NA	NA
PB.860.25	chr1	+	2295	1	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	2	-6825	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	coding	109	330	54	383	5.0	2	True	AGTAAA	-19
PB.6871.2	chr2	-	1849	9	full-splice_match	PRKRA	ENST00000424699.5	1616	9	0	-233	0	-6	multi-exon	FALSE	canonical	1	16557	junction_6	232656.8692522316	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	571	1173	40.0	-10	True	AATAAA	-26
PB.11751.1	chr9	+	4500	3	full-splice_match	TLR4	ENST00000355622.7	5432	3	-206	1138	5	577	multi-exon	FALSE	canonical	1	71259	junction_1	8282.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	839	2520	277	2796	40.0	-2	True	NA	NA
PB.6344.1	chr2	+	3464	8	full-splice_match	KLHL29	ENST00000471654.1	6385	8	2913	8	2913	-3	multi-exon	TRUE	canonical	1	48062	junction_1	12113.247351051456	NA	0	NA	TRUE	NA	NA	NA	A	coding	434	1305	221	1525	40.0	NA	False	AATAAA	-16
PB.6871.5	chr2	-	1377	8	full-splice_match	PRKRA	ENST00000325748.8	1826	8	85	364	5	-124	multi-exon	FALSE	canonical	1	450529	junction_3	61554.75994227433	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	117	1058	15.0	-5	True	AATAAA	-17
PB.6715.7	chr2	+	2534	17	full-splice_match	EPB41L5	ENST00000331393.8	1777	17	-42	-715	0	-1	multi-exon	FALSE	canonical	1	61956	junction_2	42242.59678315687	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	143	1660	30.0	0	True	AATAAA	-18
PB.8616.21	chr3	-	5223	19	full-splice_match	TFRC	ENST00000392396.7	5032	19	0	-191	0	-1	multi-exon	FALSE	canonical	1	18081	junction_18	445578.0184670418	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	284	2566	25.0	-1	True	AATAAA	-15
PB.1467.11	chr10	-	1786	4	novel_not_in_catalog	DNAJC9	novel	3032	5	NA	NA	-3766	-1503	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	641199.9970889651	NA	2	NA	TRUE	NA	NA	NA	B	coding	137	414	147	560	35.0	-10	True	AATAAA	-24
PB.1467.10	chr10	-	2443	4	novel_not_in_catalog	DNAJC9	novel	3032	5	NA	NA	-3762	-1503	any annotated donor/acceptor	FALSE	canonical	1	15	junction_1	641192.9646995686	NA	1	NA	TRUE	NA	NA	NA	B	coding	137	414	143	556	35.0	-6	True	AATAAA	-24
PB.1467.13	chr10	-	1973	3	full-splice_match	MRPS16	ENST00000372945.7	2634	3	38	623	-21	-528	multi-exon	FALSE	canonical	1	1270725	junction_2	82025.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	174	587	25.0	20	False	GATAAA	-28
PB.1467.12	chr10	-	1669	5	novel_not_in_catalog	DNAJC9	novel	3032	5	NA	NA	-3769	-1503	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	678853.8114833708	NA	8	NA	TRUE	NA	NA	NA	B	coding	137	414	150	563	35.0	-13	True	AATAAA	-24
PB.860.20	chr1	+	2049	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-17	657	1	-650	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	55	1062	10.0	1	True	TTTAAA	-38
PB.4400.3	chr16	+	4627	3	full-splice_match	ZNF720	ENST00000533488.6	639	3	-9	-3979	-5	-779	multi-exon	FALSE	canonical	1	21009	junction_1	728.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	59	180	1393	1572	90.0	0	True	NA	NA
PB.4400.2	chr16	+	2832	5	novel_not_in_catalog	ZNF720	novel	1214	4	NA	NA	5	634	any annotated donor/acceptor	FALSE	canonical	1	163	junction_4	71523.66023911249	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	182	577	10.0	-12	True	TATAAA	-16
PB.4400.1	chr16	+	2295	1	novel_in_catalog	ZNF720	novel	1214	4	NA	NA	4	-38324	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-26	True	NA	NA
PB.1188.3	chr1	-	3190	4	novel_not_in_catalog	TAF5L	novel	2956	4	NA	NA	282	-877	any annotated donor/acceptor	FALSE	canonical	1	15871	junction_3	77795.78490866684	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	95	1072	65.0	367	False	ATTAAA	-22
PB.3089.2	chr13	+	1660	2	intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	10615	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	114	345	2	346	90.0	3	True	NA	NA
PB.3089.1	chr13	+	2164	2	intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	10615	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	115	348	2	349	45.0	0	True	AATAAA	-21
PB.10650.4	chr7	-	2907	12	full-splice_match	SLC25A40	ENST00000341119.9	4045	12	204	934	160	-934	multi-exon	FALSE	canonical	1	121255	junction_10	47449.18031252572	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	144	1160	15.0	6	True	AATAAA	-17
PB.483.19	chr1	-	3070	15	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	14849	junction_10	114411.61418906272	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	1085	1936	25.0	-17	True	AATAAA	-27
PB.483.18	chr1	-	3149	15	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	14849	junction_10	105560.53996631314	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	1164	2015	25.0	-30	True	AATAAA	-27
PB.483.11	chr1	-	4323	15	full-splice_match	AC118549.1	ENST00000370801.7	4328	15	1	4	1	2	multi-exon	FALSE	canonical	1	44319	junction_14	93926.72738942166	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	476	3187	20.0	0	True	AATAAA	-29
PB.483.10	chr1	-	4439	14	novel_in_catalog	AC118549.1	novel	4500	11	NA	NA	-97	2	combination_of_known_junctions	FALSE	canonical	1	21350	junction_12	111440.888928488	NA	1	NA	TRUE	NA	NA	NA	C	coding	902	2709	595	3303	20.0	28	False	AATAAA	-29
PB.387.4	chr1	-	3056	10	novel_not_in_catalog	LRRC41	novel	892	7	NA	NA	-28569	-1	intron_retention	FALSE	canonical	1	8928	junction_9	249214.72531400173	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	485	2593	20.0	8898	False	AATAAA	-15
PB.483.15	chr1	-	2866	14	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	-2	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	137189.71069392932	NA	19	3	TRUE	NA	NA	NA	C	coding	283	852	879	1730	20.0	-24	True	AATAAA	-29
PB.483.14	chr1	-	3099	14	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	-19	2	any annotated donor/acceptor	FALSE	canonical	1	14849	junction_10	120511.4642002673	NA	3	1	TRUE	NA	NA	NA	C	coding	283	852	1112	1963	20.0	106	False	AATAAA	-29
PB.483.16	chr1	-	4525	15	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	-94	1	any annotated donor/acceptor	FALSE	canonical	1	202	junction_14	100867.8903833512	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	679	3390	20.0	31	False	AATAAA	-28
PB.7280.1	chr20	+	1310	4	novel_in_catalog	MANBAL	novel	1208	3	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	111532	junction_1	64655.30759857745	NA	0	NA	TRUE	NA	NA	NA	B	coding	119	357	954	1310	10.0	-4	True	AATAAA	-19
PB.7280.2	chr20	+	3382	2	incomplete-splice_match	MANBAL	ENST00000397150.5	620	4	6	12082	6	-12082	intron_retention	FALSE	canonical	1	111038	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.7280.3	chr20	+	1482	5	novel_not_in_catalog	MANBAL	novel	1208	3	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	1	14313	junction_1	91155.40454184546	NA	0	NA	TRUE	NA	NA	NA	B	coding	118	354	1128	1481	15.0	10	True	AATAAA	-17
PB.962.13	chr1	+	4238	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	0	2597	0	-2594	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	144	1796	35.0	0	True	AATAAA	-18
PB.962.12	chr1	+	3292	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	-4	3547	-4	-3544	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	148	1800	50.0	-4	True	NA	NA
PB.962.11	chr1	+	2505	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	0	4330	0	-4327	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	14	2	TRUE	NA	NA	NA	C	coding	550	1653	144	1796	65.0	0	True	NA	NA
PB.6118.2	chr19	+	1878	7	full-splice_match	GRWD1	ENST00000253237.9	5571	7	210	3483	-9	2337	multi-exon	FALSE	canonical	1	406537	junction_6	69920.87510596054	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	24	1364	15.0	0	True	NA	NA
PB.8562.7	chr3	+	1916	1	novel_in_catalog	PSMD2	novel	3449	21	NA	NA	0	514	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.4097.1	chr15	-	2457	1	novel_in_catalog	NR2F2-AS1	novel	1930	6	NA	NA	-1	-34457	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-11	True	CATAAA	-11
PB.8616.27	chr3	-	4908	18	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	14307	junction_13	440338.24187022	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	815	2251	25.0	-1	True	AATAAA	-15
PB.6118.1	chr19	+	2243	7	full-splice_match	GRWD1	ENST00000253237.9	5571	7	211	3117	-8	2703	multi-exon	FALSE	canonical	1	406537	junction_6	69920.87510596054	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	23	1363	15.0	1	True	AATAAA	-24
PB.7301.1	chr20	+	2703	14	full-splice_match	MYBL2	ENST00000217026.4	2639	14	-78	14	60	-13	multi-exon	FALSE	canonical	1	352820	junction_1	252173.6703452767	NA	1	NA	TRUE	NA	NA	NA	A	coding	700	2103	206	2308	5.0	-2	True	AATAAA	-15
PB.10749.1	chr7	+	2171	6	full-splice_match	PRKRIP1	ENST00000397912.3	2159	6	0	-12	0	2	multi-exon	FALSE	canonical	1	210133	junction_1	85926.95188123456	NA	0	NA	TRUE	NA	NA	NA	A	coding	184	555	50	604	5.0	0	True	AATAAA	-34
PB.8339.3	chr3	-	2860	8	novel_not_in_catalog	ILDR1	novel	2659	7	NA	NA	-4854	-1	any annotated donor/acceptor	FALSE	canonical	1	394	junction_7	13306.416054072623	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	582	1817	15.0	-7040	False	AATAAA	-14
PB.11030.1	chr8	+	3310	10	full-splice_match	RHOBTB2	ENST00000251822.6	5451	10	327	1814	-23	-56	multi-exon	FALSE	canonical	1	124442	junction_1	41754.680847676915	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	211	2394	55.0	-23	True	NA	NA
PB.2197.1	chr11	+	2117	1	novel_in_catalog	RAB30-AS1	novel	504	3	NA	NA	-3	227	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	-27	True	NA	NA
PB.11347.2	chr8	-	3028	16	full-splice_match	NDRG1	ENST00000323851.11	3014	16	-19	5	0	0	multi-exon	TRUE	canonical	1	998375	junction_15	361797.23428437405	NA	0	NA	TRUE	NA	NA	NA	A	coding	394	1185	142	1326	5.0	-5	True	AATAAA	-14
PB.1042.9	chr1	-	2351	12	full-splice_match	KLHL12	ENST00000367261.7	3359	12	6	1002	6	-986	multi-exon	FALSE	canonical	1	63468	junction_3	41475.50525608982	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	214	1920	10.0	-23	True	AGTAAA	-14
PB.5290.29	chr17	-	2798	12	incomplete-splice_match	CYTH1	ENST00000591455.5	3286	13	-22	4530	0	-2459	3prime_fragment	FALSE	canonical	1	84130	junction_3	204117.6638536162	NA	2	2	TRUE	NA	NA	NA	C	coding	372	1119	72	1190	60.0	-27	True	AAAACA	-43
PB.11623.2	chr9	-	1861	4	full-splice_match	C9orf64	ENST00000376344.7	2443	4	-36	618	-36	-615	multi-exon	FALSE	canonical	1	161752	junction_1	6538.400280054917	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	254	1279	55.0	-12	True	NA	NA
PB.8339.6	chr3	-	2821	8	novel_not_in_catalog	ILDR1	novel	2659	7	NA	NA	-4857	-2	any annotated donor/acceptor	FALSE	canonical	1	394	junction_7	16239.55569790338	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	585	1757	15.0	-7043	False	AATAAA	-13
PB.1936.2	chr11	-	2484	12	novel_in_catalog	MTCH2	novel	581	6	NA	NA	9	1	no_combination_of_known_junctions	FALSE	canonical	1	81271	junction_2	445883.5303130513	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	122	901	10.0	91	False	NA	NA
PB.27.2	chr1	-	2832	20	full-splice_match	CDK11B	ENST00000341832.10	2998	20	-200	366	-200	-6	multi-exon	FALSE	canonical	0	0	junction_15	267119.8292098143	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	313	2661	25.0	-4	True	ATTAAA	-19
PB.10650.6	chr7	-	3085	13	novel_not_in_catalog	SLC25A40	novel	4045	12	NA	NA	116	-934	any annotated donor/acceptor	FALSE	canonical	1	1986	junction_11	80007.65572257584	NA	4	1	TRUE	NA	NA	NA	C	coding	338	1017	322	1338	15.0	1	True	AATAAA	-17
PB.6918.3	chr2	-	3734	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	7	541	7	-541	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	84	2744	25.0	-41	True	AATAAA	-24
PB.6918.2	chr2	-	3821	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	5	456	5	-456	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	86	2746	35.0	-43	True	AGTAAA	-24
PB.6918.1	chr2	-	4273	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	5	4	5	-4	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	86	2746	20.0	-43	True	NA	NA
PB.11280.7	chr8	-	2490	10	novel_not_in_catalog	RRM2B	novel	4931	9	NA	NA	4	-123	any annotated donor/acceptor	FALSE	canonical	1	5368	junction_1	89609.17649823235	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	62	1117	15.0	1	True	AATAAA	-15
PB.6918.7	chr2	-	3048	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	7	1227	7	320	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	84	2744	25.0	-41	True	AATACA	-16
PB.6918.6	chr2	-	3178	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	-4	1108	-4	439	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	95	2755	30.0	-52	True	ATTAAA	-23
PB.6918.5	chr2	-	3349	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	20	913	20	634	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	71	2731	20.0	-28	True	AATAAA	-18
PB.1363.1	chr10	+	2825	1	genic	ITGB1-DT	novel	NA	NA	NA	NA	-498	-120931	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-3437	False	NA	NA
PB.5574.2	chr19	-	2157	6	incomplete-splice_match	MBD3	ENST00000434436.7	2439	7	7591	-2	-163	2	5prime_fragment	FALSE	canonical	1	602454	junction_4	173584.95729688098	NA	0	NA	TRUE	NA	NA	NA	A	coding	221	666	4	669	5.0	7747	False	AATAAA	-28
PB.11954.19	chrX	-	2484	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-13	521	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	543.9200676570042	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	425	832	75.0	NA	False	NA	NA
PB.10950.30	chr7	-	2850	3	full-splice_match	LMBR1	ENST00000485985.1	644	3	-22	-2184	3	2184	multi-exon	FALSE	canonical	1	261341	junction_2	1721.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	50	153	203	355	90.0	-2	True	NA	NA
PB.10411.7	chr7	-	4076	12	novel_not_in_catalog	ETV1	novel	6740	14	NA	NA	-33	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	75261.98928086074	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	64	1482	25.0	1	True	AATAAA	-20
PB.10411.6	chr7	-	4190	12	full-splice_match	ETV1	ENST00000405358.8	4181	12	-13	4	-13	-4	multi-exon	FALSE	non_canonical	0	0	junction_4	75271.0863121529	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	121	1596	25.0	-14	True	AATAAA	-20
PB.10411.5	chr7	-	4151	13	full-splice_match	ETV1	ENST00000405218.6	3391	13	349	-1109	41	-4	multi-exon	FALSE	non_canonical	0	0	junction_4	62523.85485467838	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	124	1557	25.0	300	False	AATAAA	-20
PB.10411.4	chr7	-	4425	14	full-splice_match	ETV1	ENST00000430479.5	6740	14	271	2044	1	-4	multi-exon	FALSE	non_canonical	0	0	junction_4	73410.51829268064	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	398	1831	25.0	-10	True	AATAAA	-20
PB.2439.1	chr12	-	1347	9	novel_not_in_catalog	PHB2	novel	874	4	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	1508865.853577013	NA	2	1	TRUE	NA	NA	NA	B	coding	289	870	114	983	25.0	7	True	AATAAA	-19
PB.2439.3	chr12	-	1886	7	novel_not_in_catalog	PHB2	novel	874	4	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	1586847.938063765	NA	2	1	TRUE	NA	NA	NA	B	coding	213	642	114	755	25.0	7	True	AATAAA	-19
PB.2439.2	chr12	-	2612	6	novel_not_in_catalog	PHB2	novel	874	4	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	1449847.7733224824	NA	2	1	TRUE	NA	NA	NA	B	coding	213	642	170	811	25.0	8825	False	AATAAA	-19
PB.11016.3	chr8	+	3558	20	full-splice_match	BMP1	ENST00000306385.9	4229	20	464	207	13	-195	multi-exon	TRUE	canonical	1	172811	junction_16	64462.002863418966	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	207	3167	10.0	2	True	NA	NA
PB.11016.2	chr8	+	3675	20	full-splice_match	BMP1	ENST00000306385.9	4229	20	552	2	36	0	multi-exon	FALSE	canonical	1	172811	junction_16	64462.002863418966	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	119	3079	25.0	-84	False	AATAAA	-18
PB.11016.1	chr8	+	2486	16	full-splice_match	BMP1	ENST00000306349.12	2626	16	139	1	-9	-1	multi-exon	FALSE	canonical	1	192105	junction_4	62199.22574137613	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	16	2208	10.0	19	True	AGTAAA	-35
PB.1218.1	chr1	+	1271	1	antisense	novelGene_LYST_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10411.9	chr7	-	3339	13	full-splice_match	ETV1	ENST00000405218.6	3391	13	256	-204	-15	-22	multi-exon	FALSE	non_canonical	0	0	junction_4	62523.85485467838	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	217	1650	90.0	4	True	TTTAAA	-12
PB.10411.8	chr7	-	3516	14	full-splice_match	ETV1	ENST00000430479.5	6740	14	275	2949	-5	-22	multi-exon	FALSE	non_canonical	0	0	junction_4	73410.51829268064	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	394	1827	90.0	-6	True	TTTAAA	-12
PB.7818.1	chr22	-	4518	6	full-splice_match	POLR3H	ENST00000431534.5	1464	6	-15	-3039	2	0	multi-exon	FALSE	canonical	1	54650	junction_3	151829.55124401837	NA	2	NA	TRUE	NA	NA	NA	C	coding	141	426	614	1039	25.0	-1	True	AATAAA	-35
PB.7818.3	chr22	-	1360	6	full-splice_match	POLR3H	ENST00000355209.8	4416	6	38	3018	20	-1	multi-exon	FALSE	canonical	1	324661	junction_4	64652.4903248127	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	307	921	30.0	62	True	AATAAA	-13
PB.7818.2	chr22	-	4463	6	full-splice_match	POLR3H	ENST00000355209.8	4416	6	-25	-22	2	0	multi-exon	FALSE	canonical	1	324661	junction_4	64652.4903248127	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	370	984	25.0	-1	True	AATAAA	-35
PB.241.5	chr1	-	1589	5	novel_not_in_catalog	SNRNP40	novel	1597	10	NA	NA	-2	5882	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	201695.38150760916	NA	1	1	TRUE	NA	NA	NA	C	coding	187	564	34	597	15.0	-3	True	AATAAA	-15
PB.7818.4	chr22	-	1597	7	novel_in_catalog	POLR3H	novel	4176	7	NA	NA	2	6	intron_retention	FALSE	canonical	1	9671	junction_5	215078.1276395084	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-1	True	AATAAA	-21
PB.9209.12	chr5	+	2752	5	incomplete-splice_match	ZNF131	ENST00000507218.5	1352	6	79	-1004	17	0	5prime_fragment	FALSE	canonical	1	26203	junction_2	78078.62986878997	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	1132	2166	80.0	-1	True	NA	NA
PB.9209.11	chr5	+	3107	8	full-splice_match	ZNF131	ENST00000505606.6	3209	8	1	101	1	-21	multi-exon	FALSE	canonical	1	45116	junction_1	75375.43484532907	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	248	2017	70.0	-674	False	NA	NA
PB.9209.10	chr5	+	2706	7	novel_in_catalog	ZNF131	novel	583	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	45116	junction_1	81414.71943696668	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	250	2121	80.0	-676	False	NA	NA
PB.9592.1	chr5	-	6537	23	full-splice_match	ADAM19	ENST00000257527.8	6481	23	-57	1	-57	-1	multi-exon	FALSE	canonical	1	96106	junction_22	30243.937855241926	NA	2	NA	TRUE	NA	NA	NA	A	coding	918	2757	137	2893	10.0	258	False	ATTAAA	-28
PB.4044.3	chr15	-	2589	8	novel_in_catalog	GOLGA2P7	novel	4253	5	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	1	37	junction_4	1171.1887036647156	NA	3	NA	TRUE	NA	NA	NA	B	coding	129	390	1218	1607	30.0	NA	False	NA	NA
PB.4044.2	chr15	-	4713	6	novel_in_catalog	GOLGA2P7	novel	4253	5	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	69	junction_3	459.81196156689964	NA	1	NA	TRUE	NA	NA	NA	B	coding	185	558	1873	2430	20.0	NA	False	NA	NA
PB.4044.1	chr15	-	4588	7	novel_in_catalog	GOLGA2P7	novel	4253	5	NA	NA	11	0	intron_retention	FALSE	canonical	1	37	junction_3	446.87373931446103	NA	2	NA	TRUE	NA	NA	NA	B	coding	185	558	1747	2304	20.0	NA	False	NA	NA
PB.10819.2	chr7	-	4125	2	full-splice_match	GCC1	ENST00000321407.2	4149	2	12	12	12	-12	multi-exon	FALSE	canonical	1	174775	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	775	2328	414	2741	15.0	0	True	ATTAAA	-13
PB.7660.14	chr22	+	6184	18	novel_not_in_catalog	SPECC1L	novel	6674	16	NA	NA	2	-488	any annotated donor/acceptor	TRUE	canonical	1	16883	junction_5	105585.8154243107	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3273	284	3556	15.0	-39	True	ATTAAA	-15
PB.7660.15	chr22	+	3834	16	full-splice_match	SPECC1L	ENST00000437398.5	6674	16	34	2806	11	160	multi-exon	FALSE	canonical	1	135054	junction_1	61366.62303022167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	171	3524	50.0	-30	True	NA	NA
PB.7660.16	chr22	+	2616	8	incomplete-splice_match	SPECC1L	ENST00000314328.13	6756	17	35	87339	-8	0	3prime_fragment	FALSE	canonical	1	58149	junction_1	110763.89014715316	NA	2	NA	TRUE	NA	NA	NA	C	coding	788	2364	251	2614	60.0	-6	True	AAGAAA	-17
PB.45.7	chr1	-	2236	15	novel_in_catalog	CEP104	novel	6424	22	NA	NA	4	349	combination_of_known_junctions	FALSE	canonical	1	14618	junction_7	90726.97037883746	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	484	2235	80.0	0	True	NA	NA
PB.7660.10	chr22	+	6262	17	full-splice_match	SPECC1L	ENST00000314328.13	6756	17	-2	496	-2	-495	multi-exon	FALSE	canonical	1	58149	junction_1	88760.27156156967	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	288	3641	35.0	-43	True	ATTAAA	-8
PB.7660.11	chr22	+	6158	16	full-splice_match	SPECC1L	ENST00000437398.5	6674	16	21	495	-2	-495	multi-exon	FALSE	canonical	1	135054	junction_1	61366.62303022167	NA	1	NA	TRUE	NA	NA	NA	C	coding	1117	3354	184	3537	35.0	-43	True	ATTAAA	-8
PB.7660.12	chr22	+	3161	12	incomplete-splice_match	SPECC1L	ENST00000541492.1	3525	15	-45	49147	-2	35225	3prime_fragment	FALSE	canonical	1	135054	junction_1	67703.0988236918	NA	1	NA	TRUE	NA	NA	NA	C	coding	992	2976	184	3159	50.0	-43	True	NA	NA
PB.7660.13	chr22	+	2367	6	incomplete-splice_match	SPECC1L	ENST00000421374.5	2565	7	16	1518	-2	-1518	3prime_fragment	FALSE	canonical	1	135054	junction_1	76318.78799614155	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2184	184	2367	60.0	-43	True	NA	NA
PB.411.5	chr1	-	5602	30	novel_in_catalog	TUT4	novel	553	3	NA	NA	1	-26	intron_retention	FALSE	canonical	1	60156	junction_1	55533.32562821509	NA	0	NA	TRUE	NA	NA	NA	C	coding	1647	4944	263	5206	80.0	-8	True	TTTAAA	-5
PB.1176.1	chr1	+	1824	5	full-splice_match	ARF1	ENST00000272102.9	1888	5	62	2	-8	-1	multi-exon	FALSE	canonical	1	4633796	junction_2	1544610.6517043987	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	82	627	10.0	0	True	AATAAA	-16
PB.3488.14	chr14	-	1909	13	novel_not_in_catalog	PPP2R5E	novel	6659	14	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	197	junction_2	103046.14383116053	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1302	606	1907	25.0	-19	True	NA	NA
PB.3488.15	chr14	-	1697	12	full-splice_match	PPP2R5E	ENST00000553266.5	1690	12	-7	0	-7	0	multi-exon	FALSE	canonical	1	197	junction_2	92331.7104291741	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	345	1351	1695	25.0	-1	True	NA	NA
PB.885.2	chr1	+	5707	12	novel_in_catalog	NOS1AP	novel	2894	10	NA	NA	-81	16342	no_combination_of_known_junctions	FALSE	canonical	1	20939	junction_3	12768.651678464348	NA	2	NA	TRUE	NA	NA	NA	C	coding	695	2088	486	2573	0.0	-47	True	AATAAA	-20
PB.178.2	chr1	+	2686	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	90	1570	38	-1513	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	108	869	35.0	0	True	ATTAAA	-37
PB.9985.1	chr6	+	3210	1	novel_in_catalog	AL365205.1	novel	3947	10	NA	NA	5739	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-5	True	AATAAA	-17
PB.3488.11	chr14	-	2218	14	novel_not_in_catalog	PPP2R5E	novel	6659	14	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	197	junction_3	104143.78259898028	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	582	1970	55.0	5	True	NA	NA
PB.11274.20	chr8	-	2349	13	novel_in_catalog	PABPC1	novel	608	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	27522	junction_4	1640010.7173012346	NA	1	1	TRUE	NA	NA	NA	C	coding	474	1425	505	1929	85.0	-1	True	NA	NA
PB.1153.1	chr1	+	1881	6	full-splice_match	CNIH3	ENST00000498382.5	897	6	-44	-940	-44	12	multi-exon	FALSE	canonical	1	131	junction_1	18729.813267622292	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-48	True	ATTAAA	-25
PB.11266.1	chr8	+	4715	29	novel_not_in_catalog	VPS13B	novel	2822	18	NA	NA	-188	-66414	any annotated donor/acceptor	FALSE	canonical	1	14070	junction_1	38213.962972251946	NA	0	NA	TRUE	NA	NA	NA	B	coding	1497	4491	224	4714	70.0	4	True	NA	NA
PB.1153.3	chr1	+	2595	5	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-32	1658	any annotated donor/acceptor	FALSE	canonical	1	148	junction_2	2412.3136715609767	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-36	True	ATTAAA	-15
PB.1153.2	chr1	+	4093	1	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-38	-3736	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-42	True	NA	NA
PB.2740.10	chr12	+	4532	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	104	6615	-5	-1272	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	10	NA	TRUE	NA	NA	NA	C	coding	1230	3693	334	4026	25.0	27	True	NA	NA
PB.2740.11	chr12	+	6485	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	106	4660	-3	683	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	332	4024	60.0	29	True	NA	NA
PB.2740.12	chr12	+	2521	2	full-splice_match	CAND1	ENST00000541058.1	663	2	244	-2102	-84	2102	multi-exon	FALSE	canonical	1	476127	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	71	216	85	300	85.0	-7	True	ATTAAA	-35
PB.2740.13	chr12	+	2866	15	novel_not_in_catalog	CAND1	novel	11251	15	NA	NA	-87	-1428	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	294974.14993684494	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	88	1791	30.0	-10	True	ATTAAA	-23
PB.1153.9	chr1	+	2693	6	full-splice_match	CNIH3	ENST00000489556.5	866	6	-44	-1783	-12	1659	multi-exon	FALSE	canonical	1	981	junction_4	1804.6542051041247	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-16	True	ATTAAA	-16
PB.1153.8	chr1	+	2331	4	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-15	1660	combination_of_known_junctions	FALSE	canonical	1	454	junction_1	2233.0359503500063	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	ATTAAA	-17
PB.2740.18	chr12	+	2826	8	incomplete-splice_match	CAND1	ENST00000545606.5	11251	15	33259	6771	3568	-1428	5prime_fragment	FALSE	canonical	1	704050	junction_1	189745.01741160586	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	35	2476	30.0	-3930	False	ATTAAA	-23
PB.1222.6	chr1	+	2984	7	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	20701	junction_6	78094.16235207484	NA	2	NA	TRUE	NA	NA	NA	C	coding	364	1095	163	1257	15.0	1	True	ATTAAA	-22
PB.178.3	chr1	+	3672	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	16	658	-9	-601	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	182	943	25.0	-12	True	GATAAA	-27
PB.8130.20	chr3	+	2166	12	incomplete-splice_match	SEMA3B	ENST00000441915.5	2710	14	799	2	799	-2	5prime_fragment	FALSE	canonical	1	109432	junction_4	70933.72600830642	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	37	1704	10.0	-7759	False	AATAAA	-43
PB.1222.5	chr1	+	3331	5	incomplete-splice_match	GPR137B	ENST00000366592.7	2042	7	-26	22755	1	5966	3prime_fragment	FALSE	canonical	1	179295	junction_2	30033.4352961412	NA	3	NA	TRUE	NA	NA	NA	C	coding	328	987	163	1149	20.0	1	True	NA	NA
PB.1222.2	chr1	+	4248	7	full-splice_match	GPR137B	ENST00000366592.7	2042	7	-7	-2199	-7	2199	multi-exon	FALSE	canonical	1	179295	junction_2	26349.71644639759	NA	5	NA	TRUE	NA	NA	NA	C	coding	384	1155	144	1298	20.0	-28	False	AATATA	-14
PB.1222.3	chr1	+	3461	7	full-splice_match	GPR137B	ENST00000366592.7	2042	7	5	-1424	5	1424	multi-exon	FALSE	canonical	1	179295	junction_2	26349.71644639759	NA	4	NA	TRUE	NA	NA	NA	C	coding	384	1155	132	1286	25.0	-16	True	ATTAAA	-18
PB.2968.8	chr12	-	2395	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-1	8	combination_of_known_junctions	FALSE	canonical	1	24262	junction_9	456839.3382654344	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1191	2264	25.0	-11	True	AATAAA	-23
PB.1222.1	chr1	+	2234	8	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	-20	-3	any annotated donor/acceptor	FALSE	canonical	1	9648	junction_7	94848.98145247228	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	184	1278	20.0	-68	False	ATTAAA	-45
PB.2968.6	chr12	-	2597	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	0	8	intron_retention	FALSE	canonical	1	714280	junction_7	289441.6530676184	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	123	1871	25.0	-23	False	AATAAA	-23
PB.2968.7	chr12	-	2224	17	full-splice_match	ANAPC5	ENST00000541887.5	2400	17	175	1	91	0	multi-exon	FALSE	canonical	1	324078	junction_8	378860.811282488	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	36	2102	10.0	226	False	AATAAA	-14
PB.2968.4	chr12	-	2508	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	6	9	intron_retention	TRUE	canonical	1	324078	junction_7	343689.8046649624	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	72	1781	25.0	-4	True	AATAAA	-24
PB.2968.5	chr12	-	4426	15	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-2	8	intron_retention	FALSE	canonical	1	714280	junction_7	352202.4165684168	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	3336	4295	25.0	-12	True	AATAAA	-23
PB.2968.2	chr12	-	3356	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-15	9	intron_retention	FALSE	canonical	1	714280	junction_8	340556.33710575534	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	1371	3224	25.0	7	False	AATAAA	-24
PB.2968.3	chr12	-	2602	17	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-5	9	combination_of_known_junctions	FALSE	canonical	1	7216	junction_9	445111.24311539734	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	83	2470	25.0	-15	True	AATAAA	-24
PB.1222.8	chr1	+	4335	7	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	-10	1366	any annotated donor/acceptor	FALSE	canonical	1	20701	junction_6	78094.16235207484	NA	4	NA	TRUE	NA	NA	NA	C	coding	364	1095	147	1241	25.0	-31	False	AATACA	-16
PB.2968.1	chr12	-	2519	17	full-splice_match	ANAPC5	ENST00000261819.7	2513	17	2	-8	2	8	multi-exon	FALSE	canonical	1	714280	junction_8	330295.2152907825	NA	20	2	TRUE	NA	NA	NA	C	coding	755	2268	121	2388	25.0	-21	False	AATAAA	-23
PB.8929.1	chr4	-	3569	2	novel_not_in_catalog	SEC24B-AS1	novel	800	8	NA	NA	32	-7	intron_retention	FALSE	canonical	1	12845	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	31	False	AATAAA	-17
PB.403.15	chr1	-	2671	11	incomplete-splice_match	NRDC	ENST00000352171.11	3691	31	66	26013	-16	725	3prime_fragment	FALSE	canonical	1	742738	junction_5	138046.73246245272	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	125	1579	100.0	65	False	NA	NA
PB.403.14	chr1	-	1767	13	incomplete-splice_match	NRDC	ENST00000352171.11	3691	31	35	25367	1	1371	3prime_fragment	FALSE	canonical	1	742738	junction_7	143128.27132176072	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1611	156	1766	60.0	34	False	TTTAAA	-24
PB.403.17	chr1	-	2855	1	novel_in_catalog	NRDC	novel	3691	31	NA	NA	-1	-13756	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	114	345	110	454	75.0	2	True	NA	NA
PB.403.16	chr1	-	2082	2	incomplete-splice_match	NRDC	ENST00000539524.5	3417	33	-687	49982	-4	814	3prime_fragment	FALSE	canonical	1	5871	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	113	457	95.0	-1	True	NA	NA
PB.411.9	chr1	-	2236	12	incomplete-splice_match	TUT4	ENST00000371544.7	5858	30	3	54480	3	-17	3prime_fragment	FALSE	canonical	1	119235	junction_11	39331.52255417723	NA	1	NA	TRUE	NA	NA	NA	C	coding	658	1974	261	2234	70.0	-6	True	NA	NA
PB.9985.3	chr6	+	619	3	full-splice_match	TOMM6	ENST00000398881.3	595	3	-26	2	-23	-2	multi-exon	FALSE	canonical	1	2322296	junction_1	8818.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-17
PB.10353.15	chr7	+	4381	23	novel_in_catalog	SUN1	novel	520	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	272684	junction_1	155805.558886312	NA	1	NA	TRUE	NA	NA	NA	B	coding	916	2751	60	2810	40.0	-8	True	AATAAA	-22
PB.8427.2	chr3	-	2632	18	full-splice_match	CEP70	ENST00000264982.7	2732	18	97	3	-5	-3	multi-exon	FALSE	canonical	1	99513	junction_1	42352.672725619814	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	171	1964	35.0	-6	True	AATAAA	-20
PB.8427.3	chr3	-	2166	14	full-splice_match	CEP70	ENST00000489254.5	1811	14	53	-408	-12	-6	multi-exon	FALSE	canonical	1	4871	junction_12	51762.109798851925	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	164	1501	35.0	-13	True	AATAAA	-17
PB.2666.25	chr12	+	3084	13	incomplete-splice_match	ERBB3	ENST00000415288.6	4353	29	11937	-632	734	134	5prime_fragment	FALSE	canonical	1	228547	junction_2	36718.00846390713	NA	2	NA	TRUE	NA	NA	NA	C	coding	699	2100	72	2171	80.0	-9310	False	NA	NA
PB.8427.6	chr3	-	2376	18	novel_in_catalog	CEP70	novel	2732	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	9242	junction_1	61297.23956157007	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	227	2023	20.0	-10	True	AATAAA	-16
PB.8427.7	chr3	-	2099	16	incomplete-splice_match	CEP70	ENST00000484888.5	1993	18	-29	4876	1	5	3prime_fragment	FALSE	canonical	1	43621	junction_14	50019.05451858655	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	217	1881	20.0	0	True	ATTAAA	-21
PB.8427.4	chr3	-	2029	18	full-splice_match	CEP70	ENST00000484888.5	1993	18	-49	13	-19	-3	multi-exon	FALSE	canonical	1	43621	junction_16	50986.199904813104	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1791	237	2027	55.0	-20	True	ATTAAA	-16
PB.8427.5	chr3	-	1978	18	full-splice_match	CEP70	ENST00000264982.7	2732	18	82	672	-20	-3	multi-exon	FALSE	canonical	1	99513	junction_1	42352.672725619814	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1791	186	1976	55.0	-21	True	ATTAAA	-16
PB.8427.8	chr3	-	2009	7	incomplete-splice_match	CEP70	ENST00000484888.5	1993	18	-36	41024	-6	892	3prime_fragment	FALSE	canonical	1	43621	junction_5	70693.57724637288	NA	3	NA	TRUE	NA	NA	NA	C	coding	212	639	224	862	40.0	-7	True	AATAAA	-36
PB.8427.9	chr3	-	1971	7	incomplete-splice_match	CEP70	ENST00000478673.5	974	9	-31	4531	-31	881	3prime_fragment	FALSE	canonical	1	125069	junction_5	46905.76463861701	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	197	835	65.0	-32	True	AATAAA	-25
PB.178.1	chr1	+	4200	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	90	56	38	1	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	108	869	20.0	0	True	AATAAA	-18
PB.306.2	chr1	-	1494	7	full-splice_match	RRAGC	ENST00000373001.3	2732	7	87	1151	87	0	multi-exon	FALSE	canonical	1	283923	junction_6	43389.093443962265	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	91	1290	90.0	0	True	NA	NA
PB.11250.2	chr8	-	3633	4	full-splice_match	UQCRB	ENST00000287022.9	5575	4	35	1907	35	-1907	multi-exon	FALSE	canonical	1	1603098	junction_3	966514.6032588781	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	70	405	25.0	-57	False	AATAAA	-24
PB.11250.1	chr8	-	4728	4	full-splice_match	UQCRB	ENST00000287022.9	5575	4	97	750	2	-750	multi-exon	FALSE	canonical	1	1603098	junction_3	966514.6032588781	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	8	343	25.0	5	True	AATAAA	-32
PB.11060.3	chr8	+	3970	8	full-splice_match	FZD3	ENST00000240093.7	13736	8	-60	9826	-9	461	multi-exon	FALSE	canonical	1	17827	junction_1	37834.66281016898	NA	2	NA	TRUE	NA	NA	NA	C	coding	666	2001	539	2539	100.0	-52	True	NA	NA
PB.3222.24	chr13	-	2809	20	incomplete-splice_match	ABCC4	ENST00000629385.1	2903	21	-5	19841	0	-19841	3prime_fragment	FALSE	canonical	1	108750	junction_19	60363.62398078982	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	138	2792	45.0	-15	True	AATAAA	-14
PB.3222.23	chr13	-	2902	21	full-splice_match	ABCC4	ENST00000629385.1	2903	21	-1	2	-1	-2	multi-exon	FALSE	canonical	1	26108	junction_1	73140.87587696774	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	134	2713	35.0	-11	True	NA	NA
PB.3222.22	chr13	-	2975	22	novel_not_in_catalog	ABCC4	novel	5856	31	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	1480	junction_1	87255.50845219861	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	148	2946	35.0	-25	True	NA	NA
PB.3222.21	chr13	-	3039	22	full-splice_match	ABCC4	ENST00000643556.1	3059	22	-128	148	3	-1	multi-exon	FALSE	canonical	1	9237	junction_21	90080.41291224142	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2451	399	2849	35.0	6	True	NA	NA
PB.3222.20	chr13	-	3372	23	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	1	584	junction_22	97770.37311954961	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	553	3003	15.0	-35	True	CATAAA	-23
PB.890.1	chr1	+	1208	9	full-splice_match	HSD17B7	ENST00000254521.7	1190	9	-36	18	8	-15	multi-exon	FALSE	canonical	1	33999	junction_8	46511.78261456311	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	92	1117	80.0	-6582	False	NA	NA
PB.6592.1	chr2	-	2254	10	full-splice_match	CAPG	ENST00000263867.8	1442	10	190	-1002	7	1002	multi-exon	FALSE	canonical	1	496949	junction_9	340241.0247323411	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	61	1107	65.0	1	True	NA	NA
PB.6592.3	chr2	-	1418	9	incomplete-splice_match	CAPG	ENST00000263867.8	1442	10	189	414	6	-267	3prime_fragment	FALSE	canonical	1	496949	junction_8	352595.5475675175	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	62	1078	5.0	0	True	ATTAAA	-24
PB.8627.1	chr3	+	3674	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	51	2414	51	1804	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	9	NA	TRUE	NA	NA	NA	C	coding	524	1575	272	1846	65.0	7	True	NA	NA
PB.11182.4	chr8	+	1628	10	full-splice_match	TERF1	ENST00000276603.9	1677	10	0	49	0	-49	multi-exon	FALSE	canonical	1	28382	junction_2	36421.46754319491	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	24	1343	65.0	0	True	ATTAAA	-11
PB.1261.9	chr10	+	3786	15	novel_in_catalog	ZMYND11	novel	762	5	NA	NA	6	-268	combination_of_known_junctions	FALSE	canonical	1	114796	junction_1	148700.63752035223	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	90	1898	85.0	-13	True	NA	NA
PB.8972.1	chr4	+	2392	2	full-splice_match	SPRY1	ENST00000622283.1	2352	2	-41	1	-41	-1	multi-exon	FALSE	canonical	1	100072	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	225	1184	15.0	-4225	False	AATATA	-18
PB.11922.1	chr9	-	2276	1	full-splice_match	TMEM203	ENST00000343666.5	1557	1	-9	-710	-9	710	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	136	411	234	644	85.0	0	True	NA	NA
PB.8972.3	chr4	+	2559	2	full-splice_match	SPRY1	ENST00000394339.2	2504	2	-50	-5	-50	0	multi-exon	FALSE	canonical	1	9562	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	391	1350	15.0	-3110	False	AATATA	-19
PB.8972.2	chr4	+	2414	2	novel_not_in_catalog	SPRY1	novel	641	3	NA	NA	234	0	any annotated donor/acceptor	FALSE	canonical	1	931	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	254	1213	20.0	-3950	False	AATATA	-11
PB.12279.1	chrX	+	1215	1	full-splice_match	RTL8C	ENST00000257013.8	1181	1	-42	8	-42	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	113	342	61	402	50.0	-970	False	AATAAA	-16
PB.6435.4	chr2	-	3719	1	novel_in_catalog	COX7A2L	novel	3056	4	NA	NA	3	-4608	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	133	402	27	428	85.0	3	True	NA	NA
PB.423.4	chr1	+	1552	8	full-splice_match	LRRC42	ENST00000319223.8	1727	8	173	2	168	-2	multi-exon	FALSE	canonical	1	137664	junction_1	114865.07100818022	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	39	1325	20.0	-5494	False	AATAAA	-17
PB.6435.1	chr2	-	2288	3	full-splice_match	COX7A2L	ENST00000234301.2	1112	3	-10	-1166	-10	-3	multi-exon	FALSE	canonical	1	1920980	junction_2	59598.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	114	345	66	410	10.0	-10	False	NA	NA
PB.6435.3	chr2	-	1124	3	full-splice_match	COX7A2L	ENST00000234301.2	1112	3	-3	-9	-3	9	multi-exon	FALSE	canonical	1	1920980	junction_2	59598.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	59	403	30.0	-3	True	AATAAA	-20
PB.8314.6	chr3	-	2050	7	novel_in_catalog	B4GALT4	novel	2494	8	NA	NA	-12	-7	no_combination_of_known_junctions	FALSE	canonical	1	1756	junction_6	91154.89717035991	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	216	1250	30.0	-13	False	AATAAA	-34
PB.423.3	chr1	+	1856	9	novel_in_catalog	LRRC42	novel	2037	9	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	1	29317	junction_1	175867.53840670647	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	344	1630	20.0	-12	True	AATAAA	-16
PB.7043.16	chr2	-	4391	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	3	-9	intron_retention	FALSE	canonical	1	893005	junction_7	455731.8824226475	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	210	1247	45.0	0	True	AATAAA	-15
PB.8627.5	chr3	+	6128	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	9	2	9	-2	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	314	1888	20.0	-35	True	GATAAA	-16
PB.423.1	chr1	+	1766	9	full-splice_match	LRRC42	ENST00000371370.7	2037	9	269	2	-7	-2	multi-exon	FALSE	canonical	1	105377	junction_1	143501.32537519472	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	253	1539	20.0	-7	True	AATAAA	-17
PB.8314.3	chr3	-	2477	10	novel_not_in_catalog	B4GALT4	novel	2494	8	NA	NA	0	-7	any annotated donor/acceptor	TRUE	canonical	1	472	junction_7	116262.82673970288	NA	10	2	TRUE	NA	NA	NA	C	coding	344	1035	643	1677	30.0	251	False	AATAAA	-34
PB.8627.7	chr3	+	1913	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	45	4181	45	37	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	278	1852	30.0	1	True	NA	NA
PB.5170.1	chr17	+	3442	7	full-splice_match	DCAF7	ENST00000614556.4	6340	7	-13	2911	-13	1570	multi-exon	FALSE	canonical	1	598494	junction_4	145675.06572734631	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	231	1259	75.0	-192	False	NA	NA
PB.5170.2	chr17	+	4312	7	full-splice_match	DCAF7	ENST00000614556.4	6340	7	0	2028	0	-2021	multi-exon	FALSE	canonical	1	598494	junction_4	145675.06572734631	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	218	1246	80.0	-16	True	NA	NA
PB.5170.3	chr17	+	6215	7	full-splice_match	DCAF7	ENST00000614556.4	6340	7	136	-11	50	11	multi-exon	FALSE	canonical	1	598494	junction_4	145675.06572734631	NA	6	NA	TRUE	NA	NA	NA	C	coding	342	1029	82	1110	25.0	-6	True	AATAAA	-25
PB.5170.4	chr17	+	2384	7	full-splice_match	DCAF7	ENST00000614556.4	6340	7	96	3860	10	621	multi-exon	FALSE	canonical	1	598494	junction_4	145675.06572734631	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	122	1150	75.0	-46	True	AAAAAG	-29
PB.5170.5	chr17	+	2429	8	novel_not_in_catalog	DCAF7	novel	6340	7	NA	NA	0	10	any annotated donor/acceptor	FALSE	canonical	1	3149	junction_7	300598.04863488727	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	218	1246	25.0	-16	True	AATAAA	-24
PB.5170.6	chr17	+	1515	7	full-splice_match	DCAF7	ENST00000614556.4	6340	7	10	4815	10	-334	multi-exon	FALSE	canonical	1	598494	junction_4	145675.06572734631	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	208	1236	10.0	-6	True	ATTAAA	-13
PB.5170.7	chr17	+	1345	8	full-splice_match	DCAF7	ENST00000431926.5	1354	8	8	1	8	-1	multi-exon	FALSE	canonical	1	115260	junction_7	266120.3963449933	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	189	1217	30.0	13	True	AATAAA	-13
PB.5170.8	chr17	+	4247	7	full-splice_match	DCAF7	ENST00000614556.4	6340	7	231	1862	145	-1855	multi-exon	FALSE	canonical	1	598494	junction_4	145675.06572734631	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	50	1015	95.0	52	False	NA	NA
PB.11095.3	chr8	-	2794	10	full-splice_match	NSD3	ENST00000316985.7	3995	10	2	1199	2	-761	multi-exon	FALSE	canonical	1	104742	junction_1	95674.71504936808	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	550	2454	45.0	-8	True	AATAAA	-32
PB.4666.1	chr17	+	6123	18	novel_not_in_catalog	RAP1GAP2	novel	3175	26	NA	NA	-15720	1	intron_retention	TRUE	canonical	1	11681	junction_1	43446.58310677583	NA	2	NA	TRUE	NA	NA	NA	A	coding	484	1455	290	1744	20.0	1	True	AATAAA	-18
PB.9324.3	chr5	-	2183	4	full-splice_match	CKMT2-AS1	ENST00000500148.6	2224	4	18	23	-3	-23	multi-exon	FALSE	canonical	1	2034	junction_1	872.4228077919305	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-9	True	NA	NA
PB.9502.2	chr5	-	2104	14	full-splice_match	HARS	ENST00000645491.1	2087	14	-3	-14	0	0	multi-exon	FALSE	canonical	1	1565	junction_11	410667.46487313235	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	431	1753	15.0	27	True	AATAAA	-16
PB.9412.5	chr5	+	2153	8	full-splice_match	SRFBP1	ENST00000339397.4	2855	8	18	684	18	-684	multi-exon	FALSE	canonical	1	154608	junction_4	21771.322792206473	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	55	1344	25.0	-3	True	ATTAAA	-17
PB.9412.4	chr5	+	3389	9	novel_not_in_catalog	SRFBP1	novel	2855	8	NA	NA	12	9546	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	64788.3801945563	NA	3	NA	TRUE	NA	NA	NA	C	coding	429	1290	61	1350	45.0	-9	True	NA	NA
PB.7057.22	chr2	+	5343	29	novel_in_catalog	SP100	novel	3882	25	NA	NA	-19	1506	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	276852.1419593929	NA	3	NA	TRUE	NA	NA	NA	C	coding	865	2598	96	2693	45.0	-18	True	AATAAA	-22
PB.9412.6	chr5	+	2818	8	full-splice_match	SRFBP1	ENST00000339397.4	2855	8	22	15	22	-15	multi-exon	FALSE	canonical	1	154608	junction_4	21771.322792206473	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	51	1340	80.0	1	True	NA	NA
PB.9412.1	chr5	+	3977	9	novel_not_in_catalog	SRFBP1	novel	2855	8	NA	NA	0	3814	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	64788.3801945563	NA	5	1	TRUE	NA	NA	NA	C	coding	429	1290	73	1362	15.0	-21	True	NA	NA
PB.8582.8	chr3	-	4193	14	novel_in_catalog	ETV5	novel	4111	13	NA	NA	-9	-8	combination_of_known_junctions	FALSE	canonical	1	1216	junction_9	96298.70092870524	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	944	1870	15.0	-2	True	AATAAA	-25
PB.9412.3	chr5	+	3015	8	full-splice_match	SRFBP1	ENST00000339397.4	2855	8	1	-161	1	161	multi-exon	FALSE	canonical	1	154608	junction_4	21771.322792206473	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	72	1361	20.0	-20	True	NA	NA
PB.9412.2	chr5	+	2679	8	full-splice_match	SRFBP1	ENST00000339397.4	2855	8	0	176	0	-176	multi-exon	FALSE	canonical	1	154608	junction_4	21771.322792206473	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	73	1362	60.0	-21	True	NA	NA
PB.177.24	chr1	+	3900	19	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	39526	junction_4	192727.6867761837	NA	1	1	TRUE	NA	NA	NA	C	coding	834	2505	421	2925	35.0	-16	True	AATAAA	-11
PB.177.25	chr1	+	3807	19	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	29283	junction_8	200519.7300274332	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	41	1396	35.0	-15	True	AATAAA	-11
PB.177.26	chr1	+	2139	14	novel_in_catalog	SRRM1	novel	480	5	NA	NA	0	65	intron_retention	FALSE	canonical	1	38943	junction_5	207001.11101988668	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2100	40	2139	80.0	-14	True	NA	NA
PB.177.27	chr1	+	2362	16	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-1	-61	intron_retention	FALSE	canonical	1	38943	junction_5	202126.63702951727	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2331	30	2360	80.0	-4	True	NA	NA
PB.177.20	chr1	+	2494	17	full-splice_match	SRRM1	ENST00000479034.5	2671	17	-10	187	-1	-61	multi-exon	FALSE	canonical	1	140993	junction_15	172171.24832160884	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2463	30	2492	80.0	-4	True	NA	NA
PB.177.21	chr1	+	2238	14	incomplete-splice_match	SRRM1	ENST00000323848.13	4011	17	268	3693	5	66	3prime_fragment	FALSE	canonical	1	68130	junction_12	193618.44236737685	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2190	48	2237	80.0	-22	True	NA	NA
PB.177.22	chr1	+	3865	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-4	1	intron_retention	FALSE	canonical	1	39526	junction_4	213715.69911341643	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	423	2888	30.0	-18	True	AATAAA	-13
PB.10445.1	chr7	-	2758	10	full-splice_match	C7orf31	ENST00000283905.7	2673	10	-92	7	-36	-7	multi-exon	FALSE	canonical	1	11768	junction_9	23528.440171181956	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	756	2528	45.0	-81	False	NA	NA
PB.401.17	chr1	-	4002	24	novel_in_catalog	EPS15	novel	4736	23	NA	NA	-19	-964	no_combination_of_known_junctions	FALSE	canonical	1	10528	junction_9	166527.55276186112	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	43	2529	15.0	-8	True	AATAAA	-30
PB.401.16	chr1	-	4044	22	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-16	-964	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	167704.4763900633	NA	9	1	TRUE	NA	NA	NA	C	coding	639	1920	114	2033	15.0	-9	True	AATAAA	-30
PB.8908.4	chr4	-	2053	9	full-splice_match	BDH2	ENST00000492366.5	2046	9	-1	-6	0	6	multi-exon	FALSE	canonical	1	21813	junction_3	57115.50295618082	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	68	589	55.0	-1	True	AATAAA	-21
PB.8908.5	chr4	-	1103	10	full-splice_match	BDH2	ENST00000296424.8	1126	10	22	1	1	-1	multi-exon	FALSE	canonical	1	21813	junction_3	54544.48047258945	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	100	837	15.0	0	True	AATAAA	-16
PB.8908.2	chr4	-	2456	10	full-splice_match	BDH2	ENST00000296424.8	1126	10	10	-1340	-3	1340	multi-exon	FALSE	canonical	1	21813	junction_3	54544.48047258945	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	112	849	20.0	-12	True	AATAAA	-16
PB.8908.3	chr4	-	2288	10	full-splice_match	BDH2	ENST00000296424.8	1126	10	21	-1183	0	1183	multi-exon	FALSE	canonical	1	21813	junction_3	54544.48047258945	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	101	838	35.0	-1	True	AATAAA	-16
PB.401.11	chr1	-	4374	26	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-26	-964	any annotated donor/acceptor	FALSE	canonical	1	2427	junction_24	176284.68059642162	NA	3	NA	TRUE	NA	NA	NA	C	coding	718	2157	745	2901	15.0	-19	False	AATAAA	-30
PB.8908.1	chr4	-	2949	10	full-splice_match	BDH2	ENST00000296424.8	1126	10	0	-1823	0	1823	multi-exon	FALSE	canonical	1	21813	junction_3	54544.48047258945	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	122	859	45.0	-22	True	AATAAA	-29
PB.10990.1	chr8	-	1609	2	novel_not_in_catalog	AC123777.1	novel	1247	5	NA	NA	-56	-31867	any annotated donor/acceptor	FALSE	canonical	1	927	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.602.6	chr1	+	3138	20	novel_in_catalog	STRIP1	novel	3125	21	NA	NA	-2	-16	no_combination_of_known_junctions	FALSE	canonical	1	4444	junction_16	96162.73310628661	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	15	1841	70.0	0	True	NA	NA
PB.8746.2	chr4	-	2612	6	novel_not_in_catalog	SMIM14	novel	6483	5	NA	NA	-35	535	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	237695.82951545448	NA	2	1	TRUE	NA	NA	NA	C	coding	99	300	235	534	15.0	-3	True	AATAAA	-15
PB.8746.3	chr4	-	1690	5	full-splice_match	SMIM14	ENST00000295958.9	6483	5	195	4598	-2	682	multi-exon	FALSE	canonical	1	293732	junction_4	133161.86316472146	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	193	492	90.0	5	True	NA	NA
PB.8746.1	chr4	-	3053	6	novel_not_in_catalog	SMIM14	novel	6483	5	NA	NA	-12	535	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	237695.82951545448	NA	3	NA	TRUE	NA	NA	NA	C	coding	99	300	155	454	15.0	7	True	AATAAA	-15
PB.8746.4	chr4	-	1686	5	novel_not_in_catalog	SMIM14	novel	6483	5	NA	NA	11094	682	any annotated donor/acceptor	FALSE	canonical	1	102821	junction_4	213579.5409190391	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	189	488	90.0	8750	False	NA	NA
PB.387.9	chr1	-	2533	5	novel_not_in_catalog	LRRC41	novel	4128	10	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	270077.04756270477	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	23	1588	25.0	-2	True	NA	NA
PB.11268.4	chr8	-	2038	2	incomplete-splice_match	FBXO43	ENST00000520987.1	2652	3	-379	4008	-20	-4008	3prime_fragment	FALSE	canonical	1	9894	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	451	1353	686	2038	60.0	-4	True	NA	NA
PB.11268.2	chr8	-	2326	2	incomplete-splice_match	FBXO43	ENST00000520987.1	2652	3	-394	3735	-35	-3735	3prime_fragment	FALSE	canonical	1	9894	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	524	1575	701	2275	10.0	4678	False	AATAAA	-26
PB.11268.3	chr8	-	2356	2	incomplete-splice_match	FBXO43	ENST00000517806.5	3082	5	-28	7079	-28	-3742	3prime_fragment	FALSE	canonical	1	4536	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	490	1473	840	2312	25.0	4685	False	AATAAA	-19
PB.11268.1	chr8	-	3067	6	novel_not_in_catalog	FBXO43	novel	2886	5	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	88	junction_3	6949.88639907157	NA	0	NA	TRUE	NA	NA	NA	B	coding	559	1680	677	2356	25.0	5	True	AATAAA	-18
PB.602.1	chr1	+	3197	20	novel_in_catalog	STRIP1	novel	3125	21	NA	NA	-9	-6	no_combination_of_known_junctions	FALSE	canonical	1	3316	junction_5	96259.5136500494	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	32	2476	35.0	-17	False	ATTAAA	-8
PB.8774.1	chr4	-	4257	6	full-splice_match	SGCB	ENST00000381431.9	4431	6	183	-9	-54	9	multi-exon	FALSE	canonical	1	215336	junction_5	102160.11330847279	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	41	997	35.0	-29	True	AATAAA	-24
PB.8774.3	chr4	-	4356	7	novel_not_in_catalog	SGCB	novel	4431	6	NA	NA	-67	8	any annotated donor/acceptor	FALSE	canonical	1	8644	junction_4	193449.53735657322	NA	3	NA	TRUE	NA	NA	NA	C	coding	219	660	438	1097	30.0	931	False	AATAAA	-23
PB.8774.2	chr4	-	4051	5	novel_not_in_catalog	SGCB	novel	4431	6	NA	NA	-54	9	any annotated donor/acceptor	FALSE	canonical	1	320	junction_4	194108.43263238206	NA	1	1	TRUE	NA	NA	NA	C	coding	219	660	132	791	35.0	-29	True	AATAAA	-24
PB.8774.5	chr4	-	4344	7	novel_in_catalog	SGCB	novel	4431	6	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	7597	junction_4	193676.78129697312	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	434	1093	20.0	-15	True	AATAAA	-15
PB.8774.4	chr4	-	4135	6	novel_in_catalog	SGCB	novel	4431	6	NA	NA	-33	8	no_combination_of_known_junctions	FALSE	canonical	1	1751	junction_5	215721.86623205352	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	217	876	30.0	-8	True	AATAAA	-23
PB.3712.18	chr14	-	3199	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-215685	-1	intron_retention	TRUE	non_canonical	0	0	junction_6	739004.251814893	NA	7	1	TRUE	NA	NA	NA	B	coding	265	798	992	1789	15.0	-10	False	AATAAA	-21
PB.3712.19	chr14	-	3021	9	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-215684	-60	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	691298.6608031202	NA	7	1	TRUE	NA	NA	NA	B	coding	265	798	873	1670	20.0	-9	False	TTTAAA	-14
PB.3712.16	chr14	-	2992	10	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240993	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	783916.4607976454	NA	4	1	TRUE	NA	NA	NA	B	coding	421	1266	399	1664	10.0	-6816	False	AATAAA	-22
PB.3712.17	chr14	-	3184	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	865745.3513109796	NA	5	1	TRUE	NA	NA	NA	B	coding	265	798	977	1774	15.0	-6808	False	AATAAA	-21
PB.3712.14	chr14	-	3036	9	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-31	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	811362.6060583208	NA	6	1	TRUE	NA	NA	NA	B	coding	421	1266	391	1656	40.0	-6808	False	TTTAAA	-43
PB.3712.13	chr14	-	2388	6	full-splice_match	IGHG1	ENST00000390548.6	2619	6	230	1	230	-1	multi-exon	FALSE	canonical	1	489	junction_2	7499088.99487202	NA	0	NA	TRUE	NA	NA	NA	A	coding	265	798	173	970	15.0	203	False	AATAAA	-21
PB.7036.9	chr2	-	1830	3	novel_not_in_catalog	FARSB	novel	3369	17	NA	NA	245	-75093	any annotated donor/acceptor	FALSE	canonical	1	10579	junction_1	290185.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	761	1168	80.0	-1	True	AATAAA	-18
PB.11445.6	chr9	+	2030	5	full-splice_match	MLANA	ENST00000381477.7	2415	5	91	294	-15	-294	multi-exon	FALSE	canonical	1	249254	junction_1	24580.27739367479	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	70	426	65.0	0	True	ACTAAA	-15
PB.11043.6	chr8	+	2669	15	full-splice_match	CDCA2	ENST00000330560.7	3731	15	203	859	1	-812	multi-exon	FALSE	canonical	1	128822	junction_3	20852.22559452343	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2394	275	2668	65.0	1	True	AAAAAG	-31
PB.7978.10	chr3	+	2109	4	full-splice_match	RPL15	ENST00000644185.1	824	4	2	-1287	2	-17	multi-exon	FALSE	canonical	1	3978	junction_2	1823385.6697247445	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	157	771	40.0	2	True	AATAAA	-14
PB.7978.11	chr3	+	1782	2	full-splice_match	RPL15	ENST00000490223.1	1785	2	1290	-1287	733	-18	multi-exon	FALSE	canonical	1	4014143	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	44	135	311	445	40.0	-3157	False	AATAAA	-13
PB.10896.2	chr7	+	4648	7	novel_in_catalog	AC073264.3	novel	1890	2	NA	NA	-11	84414	no_combination_of_known_junctions	FALSE	canonical	1	191	junction_3	17114.29399085909	NA	0	NA	TRUE	NA	NA	NA	B	coding	638	1917	310	2226	25.0	-12	True	NA	NA
PB.649.4	chr1	+	3308	27	novel_not_in_catalog	WDR3	novel	1035	10	NA	NA	21	-6487	any annotated donor/acceptor	FALSE	canonical	1	12477	junction_26	107396.3330960022	NA	0	NA	TRUE	NA	NA	NA	C	coding	894	2685	71	2755	55.0	-9	True	AATAAA	-17
PB.8982.1	chr4	+	3381	7	novel_not_in_catalog	AC108062.1	novel	637	5	NA	NA	-92	17335	any annotated donor/acceptor	FALSE	canonical	1	526	junction_6	5854.100597491945	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-63	False	NA	NA
PB.11445.1	chr9	+	2265	4	novel_in_catalog	MLANA	novel	2415	5	NA	NA	-43	-7115	combination_of_known_junctions	FALSE	canonical	1	2606	junction_3	120452.10860568426	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	98	400	25.0	-6748	False	AGTAAA	-13
PB.10896.3	chr7	+	4662	8	novel_not_in_catalog	AC073264.3	novel	1890	2	NA	NA	-4	83801	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	16108.374403345837	NA	0	NA	TRUE	NA	NA	NA	B	coding	919	2760	94	2853	35.0	-5	True	NA	NA
PB.334.3	chr1	-	3391	17	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	29991	junction_12	101268.25571823998	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	602	2401	25.0	17	True	AATAAA	-13
PB.334.4	chr1	-	3567	17	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	-84	-19	intron_retention	FALSE	canonical	1	55030	junction_12	103476.98064785276	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	680	2596	65.0	67	False	NA	NA
PB.649.7	chr1	+	3370	27	novel_in_catalog	WDR3	novel	1035	10	NA	NA	-14	-6760	combination_of_known_junctions	FALSE	canonical	1	76529	junction_1	84668.36925966058	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	204	3035	35.0	0	True	AATAAA	-42
PB.5158.2	chr17	-	6881	33	novel_in_catalog	USP32	novel	5171	34	NA	NA	-8	1862	no_combination_of_known_junctions	FALSE	canonical	1	1931	junction_14	134898.5525031073	NA	4	NA	TRUE	NA	NA	NA	C	coding	1313	3942	917	4858	15.0	-13	True	ATTAAA	-17
PB.3682.8	chr14	+	2994	16	full-splice_match	MARK3	ENST00000303622.13	3283	16	-119	408	5	63	multi-exon	FALSE	canonical	1	381516	junction_2	135653.38971052496	NA	8	NA	TRUE	NA	NA	NA	C	coding	580	1743	1056	2798	5.0	7	True	ATTAAA	-14
PB.5158.1	chr17	-	7028	34	full-splice_match	USP32	ENST00000300896.8	5171	34	5	-1862	5	1862	multi-exon	FALSE	canonical	1	1931	junction_14	125562.5018973563	NA	0	NA	TRUE	NA	NA	NA	C	coding	1604	4815	191	5005	15.0	0	True	ATTAAA	-17
PB.5158.7	chr17	-	5042	33	novel_in_catalog	USP32	novel	5171	34	NA	NA	-5	-2	no_combination_of_known_junctions	FALSE	canonical	1	1931	junction_14	135176.51591038983	NA	0	NA	TRUE	NA	NA	NA	C	coding	1560	4683	201	4883	40.0	-10	True	AATAAA	-26
PB.5158.5	chr17	-	6931	34	full-splice_match	USP32	ENST00000300896.8	5171	34	4	-1764	4	1764	multi-exon	FALSE	canonical	1	1931	junction_14	125562.5018973563	NA	1	NA	TRUE	NA	NA	NA	C	coding	1604	4815	192	5006	60.0	-1	True	AATAAA	-18
PB.3682.2	chr14	+	2975	18	full-splice_match	MARK3	ENST00000429436.6	3371	18	-145	541	-17	3	multi-exon	FALSE	canonical	1	112309	junction_16	191995.99292911656	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	1103	2917	50.0	-136	False	ATTAAA	-23
PB.3682.3	chr14	+	3466	17	novel_in_catalog	MARK3	novel	2643	16	NA	NA	-11	0	intron_retention	FALSE	canonical	1	71809	junction_16	191082.3675342243	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	650	2866	25.0	-34	True	ATTAAA	-19
PB.5158.8	chr17	-	5154	34	full-splice_match	USP32	ENST00000300896.8	5171	34	0	17	0	0	multi-exon	FALSE	canonical	1	1931	junction_14	125562.5018973563	NA	40	5	TRUE	NA	NA	NA	C	coding	1604	4815	196	5010	50.0	-5	True	AATAAA	-11
PB.5158.9	chr17	-	4907	33	novel_in_catalog	USP32	novel	5171	34	NA	NA	-34	-3	no_combination_of_known_junctions	FALSE	canonical	1	214	junction_32	135909.126735761	NA	0	NA	TRUE	NA	NA	NA	C	coding	1569	4710	40	4749	40.0	-1	True	AATAAA	-25
PB.3682.6	chr14	+	3383	16	full-splice_match	MARK3	ENST00000216288.11	2911	16	-471	-1	-3	0	multi-exon	FALSE	canonical	1	128932	junction_11	168472.77683213062	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	642	2783	25.0	-26	True	ATTAAA	-19
PB.3682.7	chr14	+	2913	15	novel_in_catalog	MARK3	novel	2643	16	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	21670	junction_3	188850.1433634427	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	1040	2782	25.0	-26	True	ATTAAA	-15
PB.3682.4	chr14	+	2835	16	full-splice_match	MARK3	ENST00000216288.11	2911	16	-469	545	-1	0	multi-exon	FALSE	canonical	1	128932	junction_11	168472.77683213062	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	1087	2781	50.0	-24	True	ATTAAA	-19
PB.3682.5	chr14	+	3503	18	full-splice_match	MARK3	ENST00000429436.6	3371	18	-131	-1	-3	0	multi-exon	FALSE	canonical	1	112309	junction_16	191995.99292911656	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	642	2903	25.0	-26	True	ATTAAA	-19
PB.334.8	chr1	-	2836	17	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	-3	434	combination_of_known_junctions	FALSE	canonical	1	29991	junction_12	101268.25571823998	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	601	2400	45.0	18	True	NA	NA
PB.529.2	chr1	+	7225	3	full-splice_match	LRRC8C	ENST00000370454.8	7218	3	-11	4	-11	-4	multi-exon	FALSE	canonical	1	94471	junction_1	18074.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	267	2678	35.0	1	True	AATAAA	-17
PB.3040.18	chr13	+	4662	27	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	157	-210	any annotated donor/acceptor	FALSE	canonical	1	35941	junction_1	156814.9295085239	NA	2	NA	TRUE	NA	NA	NA	C	coding	1290	3873	323	4195	15.0	-84	False	AATAAA	-10
PB.3040.19	chr13	+	4856	25	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	184	-203	intron_retention	FALSE	canonical	1	35941	junction_1	134704.73030288218	NA	2	NA	TRUE	NA	NA	NA	C	coding	1377	4134	249	4382	0.0	-57	False	AATAAA	-17
PB.334.9	chr1	-	2540	1	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	5002	40851	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.3040.14	chr13	+	4804	25	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	53	-210	intron_retention	FALSE	canonical	1	34297	junction_1	134889.59395392795	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	204	4337	15.0	-188	False	AATAAA	-10
PB.3040.15	chr13	+	4753	26	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	53	0	any annotated donor/acceptor	FALSE	canonical	1	34297	junction_1	138220.04269595057	NA	0	NA	TRUE	NA	NA	NA	C	coding	1290	3873	204	4076	5.0	-188	False	ATTAAA	-16
PB.3040.16	chr13	+	5018	25	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	80	-24	intron_retention	FALSE	canonical	1	34297	junction_1	134889.59395392795	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	177	4310	70.0	1	True	NA	NA
PB.3040.17	chr13	+	2593	12	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	111	5686	intron_retention	FALSE	canonical	1	34297	junction_1	113373.19323790203	NA	2	1	TRUE	NA	NA	NA	C	coding	804	2415	146	2560	20.0	-130	False	ATTAAA	-17
PB.3040.10	chr13	+	3685	13	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	-13	14462	intron_retention	FALSE	non_canonical	0	0	junction_12	150329.65336820795	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	227	1759	30.0	0	True	TATAAA	-14
PB.3040.11	chr13	+	4578	27	novel_in_catalog	ZMYM2	novel	10200	25	NA	NA	22	-210	combination_of_known_junctions	FALSE	canonical	1	43283	junction_1	156212.57708284535	NA	1	NA	TRUE	NA	NA	NA	C	coding	1290	3873	239	4111	15.0	3	True	AATAAA	-10
PB.3040.12	chr13	+	5068	26	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	47	1	intron_retention	FALSE	canonical	1	34297	junction_1	155749.08268082992	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	257	4390	10.0	-194	False	ATTAAA	-17
PB.3040.13	chr13	+	2124	7	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	51	-10	intron_retention	FALSE	canonical	1	34297	junction_1	126991.40519134444	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	206	1855	50.0	-190	False	TATAAA	-32
PB.3919.1	chr15	-	884	5	full-splice_match	PPIB	ENST00000300026.3	1081	5	188	9	4	-9	multi-exon	FALSE	canonical	1	7437355	junction_4	1777943.6225092143	NA	0	NA	TRUE	NA	NA	NA	A	coding	216	651	32	682	30.0	1	True	AATAAA	-26
PB.11811.3	chr9	-	907	4	full-splice_match	DPM2	ENST00000314392.12	1542	4	635	0	-6	0	multi-exon	FALSE	canonical	1	315996	junction_3	232397.13624359106	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	3	True	AATAAA	-16
PB.8390.2	chr3	+	2374	6	full-splice_match	HMCES	ENST00000417226.6	1490	6	-1	-883	-1	-10	multi-exon	FALSE	canonical	1	55780	junction_3	238318.3750805632	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	85	1023	40.0	-27	True	AATAAA	-5
PB.11688.7	chr9	-	2806	13	novel_in_catalog	TEX10	novel	3006	15	NA	NA	-3	-6	no_combination_of_known_junctions	FALSE	canonical	1	2754	junction_2	99467.0506545244	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	181	2481	40.0	-18	True	ATTAAA	-10
PB.11161.2	chr8	+	2655	8	full-splice_match	MTFR1	ENST00000262146.8	2640	8	-11	-4	-6	-1	multi-exon	FALSE	canonical	1	186983	junction_5	43513.04041272206	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	195	1139	20.0	-6	True	AATAAA	-27
PB.10896.5	chr7	+	6939	8	novel_in_catalog	AC073264.3	novel	1890	2	NA	NA	3	86091	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16108.374403345837	NA	1	NA	TRUE	NA	NA	NA	B	coding	919	2760	81	2840	90.0	11	True	NA	NA
PB.5290.11	chr17	-	3059	11	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	274368.2795062141	NA	3	2	TRUE	NA	NA	NA	C	coding	319	960	58	1017	5.0	-13	True	AATAAA	-20
PB.5290.10	chr17	-	3148	11	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	31	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	290091.81841460126	NA	2	1	TRUE	NA	NA	NA	C	coding	321	966	141	1106	5.0	30	True	AATAAA	-20
PB.9047.1	chr4	+	4919	14	incomplete-splice_match	RAPGEF2	ENST00000644902.1	6794	25	91643	47	1040	-42	5prime_fragment	TRUE	canonical	1	62677	junction_10	79305.47757282124	NA	3	1	TRUE	NA	NA	NA	B	coding	894	2685	247	2931	70.0	NA	False	NA	NA
PB.5290.12	chr17	-	2972	14	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242349.31111100016	NA	2	1	TRUE	NA	NA	NA	C	coding	397	1194	74	1267	5.0	-29	True	AATAAA	-20
PB.9087.1	chr4	-	2346	3	full-splice_match	LINC02363	ENST00000317596.3	2153	3	41	-234	41	234	multi-exon	FALSE	canonical	1	6219	junction_1	6429.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	400	744	30.0	3	True	NA	NA
PB.518.1	chr1	+	1533	5	full-splice_match	LMO4	ENST00000370544.9	5405	5	501	3371	-130	144	multi-exon	FALSE	canonical	1	405704	junction_1	392088.8141802186	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	280	777	70.0	-3130	False	NA	NA
PB.5290.19	chr17	-	3141	11	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	308540.2600507752	NA	12	NA	TRUE	NA	NA	NA	C	coding	133	402	362	763	5.0	-26	True	AATAAA	-19
PB.5290.18	chr17	-	3156	11	novel_in_catalog	CYTH1	novel	3315	14	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	314	junction_10	267328.2606803104	NA	5	1	TRUE	NA	NA	NA	C	coding	338	1017	99	1115	5.0	-25	True	AATAAA	-19
PB.1054.1	chr1	-	2321	8	full-splice_match	ETNK2	ENST00000367202.8	2434	8	112	1	3	-1	multi-exon	FALSE	canonical	1	87952	junction_7	34366.05786385806	NA	0	NA	TRUE	NA	NA	NA	A	coding	358	1077	124	1200	15.0	-1	True	ATTAAA	-15
PB.1809.1	chr11	+	6238	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	-47	0	-47	0	multi-exon	TRUE	canonical	1	59990	junction_10	273072.15907577536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	190	3306	35.0	-77	False	AATAAA	-21
PB.4262.4	chr16	+	2228	6	full-splice_match	BFAR	ENST00000563971.5	1662	6	-27	-539	-27	-342	multi-exon	FALSE	canonical	1	9774	junction_2	217361.3002441787	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	189	1166	40.0	-8213	False	AATAAA	-23
PB.1809.3	chr11	+	5126	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	-9	1074	-9	-1074	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	152	3268	35.0	-3	True	AATAAA	-23
PB.1809.2	chr11	+	4796	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	12	1383	12	-1383	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	131	3247	35.0	-18	True	TTTAAA	-11
PB.1809.5	chr11	+	4942	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	5	1244	5	-1244	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	138	3254	70.0	-25	True	ACTAAA	-9
PB.3046.13	chr13	-	3917	24	novel_in_catalog	XPO4	novel	9921	23	NA	NA	27	-6369	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	58460.014071533165	NA	0	NA	TRUE	NA	NA	NA	C	coding	1077	3234	661	3894	25.0	-1	True	AATAAA	-23
PB.1809.7	chr11	+	5465	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	11	715	11	-715	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	5	NA	TRUE	NA	NA	NA	C	coding	1038	3117	132	3248	35.0	-19	True	ATTAAA	-17
PB.3046.11	chr13	-	3499	23	full-splice_match	XPO4	ENST00000255305.10	9921	23	53	6369	-10	-6368	multi-exon	FALSE	non_canonical	0	0	junction_3	49435.71142530502	NA	0	NA	TRUE	NA	NA	NA	C	coding	1150	3453	23	3475	25.0	263	False	AATAAA	-24
PB.1809.9	chr11	+	4827	24	novel_in_catalog	IPO7	novel	6191	25	NA	NA	0	-1244	no_combination_of_known_junctions	FALSE	canonical	1	9954	junction_5	213688.6630340279	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	113	3139	70.0	0	True	ACTAAA	-9
PB.1809.8	chr11	+	4656	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	22	1513	-8	-1513	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	7	NA	TRUE	NA	NA	NA	C	coding	1038	3117	121	3237	55.0	-8	True	NA	NA
PB.5470.3	chr18	-	3434	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	19	966	combination_of_known_junctions	FALSE	canonical	1	58548	junction_11	208791.22695946702	NA	7	NA	TRUE	NA	NA	NA	C	coding	467	1404	463	1866	15.0	11	True	NA	NA
PB.4262.9	chr16	+	2373	8	full-splice_match	BFAR	ENST00000261658.6	3039	8	113	553	-3	333	multi-exon	FALSE	canonical	1	373444	junction_5	108531.21648556573	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	165	1517	65.0	-23	True	NA	NA
PB.4262.8	chr16	+	2492	8	full-splice_match	BFAR	ENST00000261658.6	3039	8	146	401	-13	-396	multi-exon	FALSE	canonical	1	373444	junction_5	108531.21648556573	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	132	1484	85.0	10	True	NA	NA
PB.5470.7	chr18	-	3406	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	-43	967	combination_of_known_junctions	FALSE	canonical	1	19524	junction_11	258341.11722096274	NA	5	NA	TRUE	NA	NA	NA	C	coding	467	1404	434	1837	15.0	4	True	NA	NA
PB.5470.6	chr18	-	3025	11	full-splice_match	SMAD2	ENST00000402690.6	12075	11	261	8789	-25	885	multi-exon	FALSE	canonical	1	76274	junction_10	198369.8849760215	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	135	1538	20.0	-9	True	NA	NA
PB.11666.2	chr9	+	2974	14	full-splice_match	ERCC6L2	ENST00000288985.11	4564	14	-84	1674	-84	4	multi-exon	FALSE	canonical	1	69979	junction_1	19622.353154037748	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	390	2528	15.0	-15	True	AATAAA	-20
PB.6443.8	chr2	-	4812	36	novel_in_catalog	LRPPRC	novel	6335	38	NA	NA	1	529	no_combination_of_known_junctions	FALSE	canonical	1	8910	junction_9	325906.8218051589	NA	0	NA	TRUE	NA	NA	NA	C	coding	1310	3933	29	3961	25.0	13	True	AATAAA	-13
PB.8280.10	chr3	+	3358	15	full-splice_match	ALCAM	ENST00000472644.6	4189	15	-434	1265	0	-318	multi-exon	FALSE	canonical	1	125743	junction_12	162493.09560567583	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	654	2213	40.0	0	True	AATAAA	-17
PB.5292.12	chr17	-	2558	3	novel_in_catalog	TIMP2	novel	3345	5	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	1975502	junction_2	251408.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	347	676	20.0	-18	False	AATAAA	-25
PB.11768.7	chr9	+	6889	7	full-splice_match	MRRF	ENST00000344641.7	9826	7	221	2716	-10	-2716	multi-exon	FALSE	canonical	1	80395	junction_1	36995.207292071405	NA	3	NA	TRUE	NA	NA	NA	C	coding	262	789	91	879	35.0	-17	True	NA	NA
PB.11808.2	chr9	-	2990	15	novel_not_in_catalog	ENG	novel	3048	15	NA	NA	-52	0	any annotated donor/acceptor	FALSE	canonical	1	7150	junction_2	307600.6177442395	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	334	2325	15.0	-1	True	AATAAA	-16
PB.5292.14	chr17	-	2336	5	novel_in_catalog	TIMP2	novel	3345	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3554	junction_4	1125091.6189525134	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	71	553	20.0	-4	True	AATAAA	-25
PB.5486.1	chr18	-	3656	2	novel_not_in_catalog	MEX3C	novel	3781	2	NA	NA	256	0	any annotated donor/acceptor	FALSE	canonical	1	1278	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	372	1119	739	1857	15.0	1352	False	AATAAA	-21
PB.9352.4	chr5	+	5381	12	full-splice_match	RHOBTB3	ENST00000379982.7	5537	12	143	13	143	-13	multi-exon	FALSE	canonical	1	368617	junction_1	57699.64238799474	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	366	2201	50.0	8	True	AATAAA	-9
PB.9352.5	chr5	+	2602	11	incomplete-splice_match	RHOBTB3	ENST00000379982.7	5537	12	152	6983	152	1	3prime_fragment	FALSE	canonical	1	368617	junction_1	59563.819808756394	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	357	2129	25.0	-9	True	TATAAA	-19
PB.8601.8	chr3	+	5144	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	0	1184	0	5	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	235	3117	15.0	4	True	AATAAA	-17
PB.8601.9	chr3	+	5196	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-135	-974	1	4	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	2	NA	TRUE	NA	NA	NA	C	coding	978	2937	234	3170	15.0	5	True	AATAAA	-16
PB.11631.2	chr9	-	6055	27	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	367	0	any annotated donor/acceptor	FALSE	canonical	1	12811	junction_26	86184.82321954728	NA	1	NA	TRUE	NA	NA	NA	C	coding	1495	4488	626	5113	30.0	456	False	AATAAA	-19
PB.11631.4	chr9	-	5724	28	full-splice_match	TUT7	ENST00000277141.10	5724	28	-2	2	0	0	multi-exon	FALSE	canonical	1	26768	junction_16	91632.97969848245	NA	1	NA	TRUE	NA	NA	NA	C	coding	784	2355	2428	4782	30.0	-3	True	AATAAA	-19
PB.11631.5	chr9	-	5621	27	full-splice_match	TUT7	ENST00000375963.7	5379	27	-18	-224	-18	0	multi-exon	FALSE	canonical	1	143907	junction_21	73877.33315343689	NA	1	NA	TRUE	NA	NA	NA	C	coding	1495	4488	192	4679	30.0	69	True	AATAAA	-19
PB.11631.6	chr9	-	5737	29	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	32236	junction_2	94045.25925028908	NA	15	2	TRUE	NA	NA	NA	C	coding	1541	4626	170	4795	30.0	1	True	AATAAA	-19
PB.9882.1	chr6	+	2403	1	full-splice_match	HSPA1A	ENST00000375651.6	2483	1	79	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	641	1926	215	2140	15.0	0	True	AATAAA	-17
PB.4934.3	chr17	+	2462	8	full-splice_match	MRPL45	ENST00000613675.4	1705	8	141	-898	141	898	multi-exon	FALSE	canonical	1	134284	junction_2	195242.47746944864	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	21	941	85.0	-4	True	NA	NA
PB.4934.2	chr17	+	1472	7	novel_in_catalog	MRPL45	novel	1554	7	NA	NA	140	6	no_combination_of_known_junctions	FALSE	canonical	1	7319	junction_3	241291.8948014808	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	22	843	25.0	-5	True	TATAAA	-31
PB.4934.1	chr17	+	1563	8	full-splice_match	MRPL45	ENST00000613675.4	1705	8	134	8	134	-7	multi-exon	FALSE	canonical	1	134284	junction_2	195242.47746944864	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	28	948	15.0	-58	False	TATAAA	-17
PB.8601.3	chr3	+	3341	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	64	3088	-8	-685	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	171	3218	45.0	0	True	AATAAA	-11
PB.8693.3	chr4	-	7175	17	full-splice_match	AFAP1	ENST00000358461.6	7516	17	167	174	167	-174	multi-exon	FALSE	canonical	1	101100	junction_16	35666.424432631225	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	107	2299	50.0	118	False	AGTAAA	-6
PB.9352.8	chr5	+	3943	12	full-splice_match	RHOBTB3	ENST00000379982.7	5537	12	166	1428	166	607	multi-exon	FALSE	canonical	1	368617	junction_1	57699.64238799474	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	343	2178	60.0	5	True	NA	NA
PB.8601.6	chr3	+	3285	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	108	2935	5	-532	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	127	3009	25.0	-70	False	AATATA	-34
PB.4934.4	chr17	+	2754	7	novel_in_catalog	MRPL45	novel	1554	7	NA	NA	147	-2	intron_retention	FALSE	canonical	1	134284	junction_1	210839.90044344074	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	1382	2134	10.0	2	True	TATAAA	-22
PB.3339.8	chr14	+	2534	15	novel_in_catalog	DCAF11	novel	849	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	55649	junction_2	236833.52866940104	NA	1	1	TRUE	NA	NA	NA	C	coding	502	1509	307	1815	5.0	-32	True	AATAAA	-15
PB.10986.14	chr8	-	2271	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	-1	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	1825084.5783487542	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	116	1135	30.0	-4	True	AATAAA	-16
PB.1239.1	chr1	+	2319	4	full-splice_match	COX20	ENST00000411948.6	2631	4	316	-4	-18	4	multi-exon	FALSE	canonical	1	79786	junction_1	108486.47810979333	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	78	434	15.0	-57	False	NA	NA
PB.6210.15	chr19	+	2658	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-27	3	combination_of_known_junctions	FALSE	canonical	1	10540	junction_11	41886.513321062615	NA	0	NA	TRUE	NA	NA	NA	B	coding	652	1959	385	2343	70.0	-5	True	NA	NA
PB.506.13	chr1	-	2738	10	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	5161	junction_6	13866.454903119502	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	732	1409	85.0	-32	True	NA	NA
PB.11578.1	chr9	-	3109	1	intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	A	coding	103	312	441	752	15.0	5297	False	NA	NA
PB.832.5	chr1	+	1976	6	novel_in_catalog	PRCC	novel	833	4	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	1	18639	junction_3	386702.69592316006	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	238	1617	5.0	0	True	AATAAA	-22
PB.10986.16	chr8	-	2721	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	3	-129	intron_retention	TRUE	non_canonical	0	0	junction_1	2126070.429174369	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	110	1129	80.0	2	True	NA	NA
PB.693.8	chr1	+	2515	21	incomplete-splice_match	CHD1L	ENST00000369258.8	2967	23	-3	2054	-3	-2052	3prime_fragment	FALSE	canonical	1	174357	junction_1	122345.64472439344	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2490	24	2513	65.0	-5	True	NA	NA
PB.693.9	chr1	+	4226	22	novel_not_in_catalog	AC242426.2	novel	573	3	NA	NA	69297	43101	intron_retention	FALSE	non_canonical	0	0	junction_6	151366.14948515972	NA	0	NA	TRUE	NA	NA	NA	B	coding	526	1581	2395	3975	15.0	-4	True	AATAAA	-13
PB.9173.1	chr5	-	1707	6	full-splice_match	C1QTNF3	ENST00000231338.7	1959	6	1	251	0	1	multi-exon	FALSE	canonical	1	19025	junction_5	24971.382313360227	NA	0	NA	TRUE	NA	NA	NA	A	coding	246	741	88	828	40.0	0	True	AATAAA	-12
PB.10986.17	chr8	-	2544	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-292	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	115	1134	65.0	-3	True	NA	NA
PB.11124.4	chr8	+	3030	18	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	-10	-237	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	339274.35497233825	NA	1	NA	TRUE	NA	NA	NA	C	coding	863	2592	104	2695	30.0	-31	True	AATAAA	-11
PB.6843.2	chr2	+	5680	12	full-splice_match	MAP3K20	ENST00000338983.7	7179	12	-54	1553	-48	-1553	multi-exon	FALSE	canonical	1	95039	junction_1	75796.10292223703	NA	3	NA	TRUE	NA	NA	NA	C	coding	455	1368	250	1617	95.0	-161	False	NA	NA
PB.6843.3	chr2	+	5853	12	full-splice_match	MAP3K20	ENST00000338983.7	7179	12	88	1238	-29	-1238	multi-exon	FALSE	canonical	1	95039	junction_1	75796.10292223703	NA	3	NA	TRUE	NA	NA	NA	C	coding	455	1368	108	1475	95.0	0	True	NA	NA
PB.693.2	chr1	+	2823	22	novel_in_catalog	AC242426.2	novel	573	3	NA	NA	69275	43101	intron_retention	FALSE	canonical	1	12301	junction_14	151015.87257293845	NA	0	NA	TRUE	NA	NA	NA	B	coding	540	1623	45	1667	15.0	-26	False	AATAAA	-13
PB.6210.11	chr19	+	2461	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-29	-5	combination_of_known_junctions	FALSE	canonical	1	7098	junction_8	44549.56529360179	NA	3	NA	TRUE	NA	NA	NA	B	coding	415	1248	387	1634	45.0	-7	True	NA	NA
PB.1852.1	chr11	+	3652	3	full-splice_match	TMEM86A	ENST00000280734.2	3595	3	-56	-1	-44	1	multi-exon	FALSE	canonical	1	24221	junction_1	14762.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	240	723	153	875	35.0	-12	True	NA	NA
PB.693.5	chr1	+	6152	5	incomplete-splice_match	CHD1L	ENST00000492728.1	662	6	-67	-2149	-5	2149	intron_retention	FALSE	canonical	1	174357	junction_1	75717.55171812874	NA	4	NA	TRUE	NA	NA	NA	C	coding	165	498	26	523	90.0	-7	True	NA	NA
PB.6843.4	chr2	+	2243	12	full-splice_match	MAP3K20	ENST00000338983.7	7179	12	-5	4941	1	1	multi-exon	FALSE	canonical	1	95039	junction_1	75796.10292223703	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	201	1568	85.0	-12	True	NA	NA
PB.6843.5	chr2	+	2038	11	novel_in_catalog	MAP3K20	novel	2312	12	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	2739	junction_1	102943.43439195139	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	299	1363	85.0	0	True	NA	NA
PB.9252.3	chr5	-	1697	11	full-splice_match	CENPK	ENST00000514814.5	1697	11	-1	1	-1	0	multi-exon	FALSE	canonical	1	47267	junction_9	85881.88846089726	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	180	989	25.0	-34	True	AATAAA	-20
PB.9252.2	chr5	-	1697	11	full-splice_match	CENPK	ENST00000396679.5	1734	11	36	1	1	0	multi-exon	TRUE	canonical	1	153134	junction_9	63864.3090140338	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	180	989	25.0	0	True	AATAAA	-20
PB.9252.1	chr5	-	4541	10	novel_in_catalog	CENPK	novel	1697	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	153134	junction_8	65483.58716502937	NA	21	NA	TRUE	NA	NA	NA	C	coding	250	753	183	935	25.0	-3	True	AATAAA	-20
PB.9252.7	chr5	-	3355	2	full-splice_match	CENPK	ENST00000504508.1	634	2	-1	-2720	-1	2720	multi-exon	FALSE	canonical	1	216227	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	NA	NA
PB.9252.6	chr5	-	1960	11	novel_in_catalog	CENPK	novel	1697	11	NA	NA	18	-2	intron_retention	FALSE	canonical	1	4852	junction_10	100007.34151596072	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	445	1254	20.0	30	False	AATAAA	-18
PB.9252.5	chr5	-	1618	10	full-splice_match	CENPK	ENST00000510693.5	1040	10	-11	-567	-11	-1	multi-exon	FALSE	canonical	1	18946	junction_3	88940.19351032648	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	201	911	25.0	-21	True	AATAAA	-19
PB.1357.2	chr10	-	5007	19	novel_not_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	70336.38600247307	NA	2	1	TRUE	NA	NA	NA	C	coding	474	1425	252	1676	20.0	-4	True	AATAAA	-17
PB.832.4	chr1	+	2132	8	novel_not_in_catalog	PRCC	novel	833	4	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	6587	junction_4	397331.01839064487	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	238	1476	20.0	0	True	AATAAA	-15
PB.10986.13	chr8	-	2361	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	2	1	TRUE	NA	NA	NA	C	coding	339	1020	113	1132	30.0	-1	True	AATAAA	-16
PB.11810.3	chr9	-	1693	6	full-splice_match	ST6GALNAC4	ENST00000335791.9	1691	6	-3	1	-3	-1	multi-exon	FALSE	canonical	1	200583	junction_3	67816.1956143221	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	280	1188	10.0	11	True	NA	NA
PB.1357.1	chr10	-	4847	18	novel_in_catalog	ARHGAP12	novel	4958	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	35234	junction_11	70776.18684514659	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	249	2627	20.0	-1	True	AATAAA	-17
PB.5210.33	chr17	+	3677	12	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	99148	7809	no_combination_of_known_junctions	FALSE	canonical	1	6673	junction_1	861346.9623868141	NA	1	1	TRUE	NA	NA	NA	B	coding	381	1146	223	1368	45.0	-20	True	AATAAA	-17
PB.5210.32	chr17	+	3149	11	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98988	7254	no_combination_of_known_junctions	FALSE	canonical	1	52198	junction_1	704778.3732780397	NA	4	NA	TRUE	NA	NA	NA	B	coding	381	1146	250	1395	75.0	0	True	NA	NA
PB.5210.31	chr17	+	3456	11	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98965	7538	no_combination_of_known_junctions	FALSE	canonical	1	52198	junction_1	704778.3732780397	NA	0	NA	TRUE	NA	NA	NA	B	coding	381	1146	273	1418	30.0	-23	True	ATTAAA	-41
PB.5210.30	chr17	+	3185	10	novel_not_in_catalog	AC007780.1	novel	719	6	NA	NA	98730	7810	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	753577.6291423973	NA	0	NA	TRUE	NA	NA	NA	B	coding	257	774	102	875	45.0	40	True	AATAAA	-18
PB.5210.35	chr17	+	3576	11	novel_not_in_catalog	AC007780.1	novel	719	6	NA	NA	101376	7809	any annotated donor/acceptor	FALSE	canonical	1	212	junction_1	718399.7627071992	NA	3	NA	TRUE	NA	NA	NA	B	coding	381	1146	122	1267	45.0	-9807	False	AATAAA	-17
PB.5210.34	chr17	+	4354	11	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	99002	8473	no_combination_of_known_junctions	FALSE	canonical	1	52198	junction_1	704778.3732780397	NA	0	NA	TRUE	NA	NA	NA	B	coding	381	1146	236	1381	35.0	14	True	AATAAA	-8
PB.5351.1	chr17	-	2636	11	novel_not_in_catalog	WDR45B	novel	2587	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	3838	junction_7	132207.8947727404	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	105	449	35.0	-1	True	AATAAA	-32
PB.12017.2	chrX	-	4648	17	novel_in_catalog	DMD	novel	621	2	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	46360	junction_8	39844.05543471165	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	143	1957	45.0	-20	True	AATAAA	-18
PB.5210.39	chr17	+	3025	7	incomplete-splice_match	PRKAR1A	ENST00000586397.5	1940	10	9193	-2102	-1781	4	5prime_fragment	FALSE	canonical	1	2125139	junction_5	110589.88148974872	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	19	708	30.0	-7638	False	AATAAA	-25
PB.5351.2	chr17	-	2493	10	full-splice_match	WDR45B	ENST00000392325.8	2587	10	91	3	0	-3	multi-exon	FALSE	canonical	1	119839	junction_7	94621.87742774193	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	105	1139	35.0	-1	True	AATAAA	-31
PB.5351.5	chr17	-	2581	11	novel_in_catalog	WDR45B	novel	2587	10	NA	NA	0	1	intron_retention	FALSE	canonical	1	3881	junction_7	129189.14621163033	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	449	1237	25.0	-1	True	AATAAA	-21
PB.12017.6	chrX	-	4306	13	full-splice_match	DMD	ENST00000378680.6	1858	13	-3	-2445	0	0	multi-exon	FALSE	canonical	1	6542	junction_4	42892.36530832795	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	124	1701	45.0	-1	True	AATAAA	-18
PB.12017.5	chrX	-	4320	14	novel_in_catalog	DMD	novel	621	2	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	67	junction_8	50829.408586044956	NA	21	NA	TRUE	NA	NA	NA	C	coding	529	1590	126	1715	45.0	-3	True	AATAAA	-18
PB.12017.4	chrX	-	4642	17	full-splice_match	DMD	ENST00000378723.7	4645	17	-6	9	-6	0	multi-exon	FALSE	canonical	1	56445	junction_16	33275.211526375	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	130	2037	45.0	-7	True	AATAAA	-18
PB.4801.2	chr17	+	2207	2	full-splice_match	MED9	ENST00000268711.3	2228	2	15	6	-5	-6	multi-exon	FALSE	canonical	1	150929	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	42	482	25.0	1	True	ATTAAA	-26
PB.5591.6	chr19	+	2480	8	full-splice_match	SPPL2B	ENST00000618220.4	2459	8	-12	-9	0	9	multi-exon	FALSE	canonical	1	34015	junction_7	104946.85956060169	NA	2	NA	TRUE	NA	NA	NA	C	coding	319	960	27	986	10.0	0	True	NA	NA
PB.5591.5	chr19	+	3713	14	novel_in_catalog	AC005258.1	novel	1268	8	NA	NA	59159	12756	intron_retention	FALSE	canonical	1	34015	junction_6	154408.63220538694	NA	3	1	TRUE	NA	NA	NA	B	coding	364	1095	1594	2688	20.0	0	True	AATAAA	-14
PB.4801.1	chr17	+	2346	3	full-splice_match	MED9	ENST00000581315.1	568	3	-29	-1749	2	-6	multi-exon	FALSE	canonical	1	1973	junction_1	292.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	87	569	25.0	-4	True	ATTAAA	-26
PB.5591.3	chr19	+	2611	15	full-splice_match	SPPL2B	ENST00000610743.4	2583	15	-30	2	4	-2	multi-exon	FALSE	canonical	1	34015	junction_7	158402.52389649797	NA	3	NA	TRUE	NA	NA	NA	C	coding	511	1536	48	1583	15.0	-21	False	AATAAA	-17
PB.5591.2	chr19	+	4762	14	novel_in_catalog	AC005258.1	novel	1268	8	NA	NA	59123	12762	intron_retention	FALSE	canonical	1	34015	junction_7	146008.7783255862	NA	5	NA	TRUE	NA	NA	NA	B	coding	319	960	63	1022	5.0	-36	False	AATAAA	-20
PB.5591.1	chr19	+	3437	15	full-splice_match	SPPL2B	ENST00000613503.4	3456	15	16	3	-13	-3	multi-exon	FALSE	canonical	1	34015	junction_7	143830.63023073852	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	65	1843	5.0	-38	False	ATTAAA	-18
PB.7999.4	chr3	-	1658	13	full-splice_match	DYNC1LI1	ENST00000273130.8	2504	13	62	784	13	-471	multi-exon	FALSE	canonical	1	380588	junction_12	91165.33116126468	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	43	1614	15.0	45	True	AATAAA	-31
PB.7999.1	chr3	-	2436	13	full-splice_match	DYNC1LI1	ENST00000273130.8	2504	13	63	5	14	-5	multi-exon	FALSE	canonical	1	380588	junction_12	91165.33116126468	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	42	1613	25.0	46	True	AATAAA	-27
PB.7999.3	chr3	-	2345	13	full-splice_match	DYNC1LI1	ENST00000273130.8	2504	13	25	134	9	-5	multi-exon	FALSE	canonical	1	380588	junction_12	91165.33116126468	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	80	1651	25.0	8	True	ATTAAA	-13
PB.11356.2	chr8	-	3415	19	full-splice_match	AGO2	ENST00000220592.9	14581	19	-24	11190	-24	75	multi-exon	FALSE	canonical	1	45207	junction_18	73689.40753897025	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	138	2717	80.0	-11	True	AATAAA	-10
PB.8334.1	chr3	-	6087	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	-10	31354	5	921	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	3	NA	TRUE	NA	NA	NA	C	coding	1988	5964	122	6085	55.0	215	False	AAGAAA	-38
PB.6560.25	chr2	-	1330	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-2	3557	-2	2984	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	197	847	35.0	8	True	AATAAA	-17
PB.890.2	chr1	+	1496	9	full-splice_match	HSD17B7	ENST00000254521.7	1190	9	-18	-288	5	0	multi-exon	FALSE	canonical	1	33999	junction_8	46511.78261456311	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	74	1099	5.0	-6564	False	AATAAA	-13
PB.3154.1	chr13	-	1137	10	full-splice_match	ESD	ENST00000378720.7	1192	10	54	1	-45	-1	multi-exon	FALSE	canonical	1	1149677	junction_9	218733.46606354692	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	130	978	35.0	2	True	AATAAA	-13
PB.3154.2	chr13	-	3794	9	novel_in_catalog	ESD	novel	1192	10	NA	NA	-32	-1	intron_retention	FALSE	canonical	1	1149677	junction_8	232001.13361519243	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	3144	3635	35.0	15	False	AATAAA	-13
PB.3154.3	chr13	-	2977	9	incomplete-splice_match	ESD	ENST00000378720.7	1192	10	49	4125	49	2	3prime_fragment	FALSE	canonical	1	1149677	junction_8	228090.7476819465	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	135	923	30.0	-3	True	AATAAA	-39
PB.11043.9	chr8	+	2375	16	novel_in_catalog	CDCA2	novel	3731	15	NA	NA	31	-1148	combination_of_known_junctions	FALSE	canonical	1	10033	junction_8	56435.58471720953	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2130	245	2374	70.0	-3	True	AATATA	-14
PB.1040.1	chr1	-	6554	28	full-splice_match	KDM5B	ENST00000367264.7	6520	28	-2	-32	-2	1	multi-exon	FALSE	canonical	1	16204	junction_22	141106.42776125346	NA	0	NA	TRUE	NA	NA	NA	C	coding	1580	4743	179	4921	10.0	-3	True	ATTAAA	-17
PB.8334.3	chr3	-	5132	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	-1	32300	-1	-25	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1673	5019	113	5131	60.0	-1	True	NA	NA
PB.7993.2	chr3	-	4764	3	intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3940	junction_2	979.5	NA	3	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.8334.2	chr3	-	5856	13	incomplete-splice_match	GOLGB1	ENST00000340645.9	11187	22	14	31565	-1	714	3prime_fragment	FALSE	canonical	1	27753	junction_7	63689.75077649638	NA	0	NA	TRUE	NA	NA	NA	C	coding	1914	5742	113	5854	55.0	-1	True	ACTAAA	-10
PB.9163.8	chr5	+	3244	9	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	18845	junction_2	62787.307054128185	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	262	1338	25.0	-9	True	AATAAA	-18
PB.3499.1	chr14	+	2519	1	full-splice_match	HSPA2	ENST00000247207.6	2767	1	249	-1	-24	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	639	1920	134	2053	20.0	-9244	False	AGTAAA	-17
PB.2372.10	chr11	+	3564	17	novel_in_catalog	APLP2	novel	3742	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	641618	junction_12	1169970.1714856878	NA	8	NA	TRUE	NA	NA	NA	C	coding	707	2124	85	2208	20.0	0	True	AATAAA	-14
PB.9163.4	chr5	+	3208	9	full-splice_match	C5orf22	ENST00000325366.13	3612	9	157	247	107	3	multi-exon	FALSE	canonical	1	168920	junction_2	18407.342989619658	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	157	1299	25.0	-5741	False	AATAAA	-21
PB.9163.5	chr5	+	3537	10	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	307	junction_8	81656.2225920352	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	106	1632	30.0	-13	True	AATAAA	-17
PB.9163.6	chr5	+	3182	9	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	0	39	combination_of_known_junctions	FALSE	canonical	1	25685	junction_3	60532.783857179405	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	673	1206	55.0	-6	True	AATAAA	-19
PB.9163.7	chr5	+	3358	9	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	1	25685	junction_3	60532.783857179405	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	676	1209	35.0	-9	True	ATTAAA	-28
PB.2372.13	chr11	+	2366	15	novel_in_catalog	APLP2	novel	3742	19	NA	NA	2	-9	no_combination_of_known_junctions	FALSE	canonical	1	83402	junction_11	1138533.0602499258	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	83	2017	45.0	2	True	AATAAA	-19
PB.9163.2	chr5	+	3594	9	full-splice_match	C5orf22	ENST00000325366.13	3612	9	17	1	-4	-1	multi-exon	FALSE	canonical	1	168920	junction_2	18407.342989619658	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	111	1439	35.0	-18	True	ATTAAA	-34
PB.9163.3	chr5	+	3439	10	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	5806	junction_3	83306.10550979969	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	111	1532	25.0	-18	True	AATAAA	-19
PB.1828.6	chr11	-	2553	10	novel_not_in_catalog	BTBD10	novel	2504	9	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	8720	junction_2	65708.17793476071	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	367	1302	35.0	-35	True	AATAAA	-14
PB.1828.7	chr11	-	2417	9	full-splice_match	BTBD10	ENST00000278174.9	2504	9	64	23	10	0	multi-exon	FALSE	canonical	1	25945	junction_1	62781.10908346555	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	327	1610	35.0	5	True	AATAAA	-14
PB.1828.4	chr11	-	2441	9	novel_in_catalog	BTBD10	novel	2504	9	NA	NA	17	-10	no_combination_of_known_junctions	FALSE	canonical	1	432	junction_7	81429.05747480057	NA	10	2	TRUE	NA	NA	NA	C	coding	427	1284	338	1621	45.0	12	True	AATAAA	-27
PB.1828.5	chr11	-	2277	8	full-splice_match	BTBD10	ENST00000528120.5	1662	8	76	-691	5	-10	multi-exon	FALSE	canonical	1	25945	junction_1	64984.230739276354	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	174	1457	45.0	0	True	AATAAA	-27
PB.1828.2	chr11	-	3205	8	full-splice_match	BTBD10	ENST00000528120.5	1662	8	101	-1644	-15	943	multi-exon	FALSE	canonical	1	25945	junction_1	64984.230739276354	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	149	1432	25.0	25	True	TATAAA	-12
PB.1828.3	chr11	-	4712	7	novel_in_catalog	BTBD10	novel	2504	9	NA	NA	-10	4	intron_retention	FALSE	canonical	1	25945	junction_1	57592.30894833094	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	215	1108	25.0	-41	True	AATAAA	-41
PB.10571.6	chr7	-	2028	11	novel_in_catalog	GUSB	novel	2300	12	NA	NA	-15	-18	combination_of_known_junctions	FALSE	canonical	1	145442	junction_6	229124.6190784395	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	48	1850	50.0	-18	True	AATAAA	-17
PB.1828.1	chr11	-	5483	8	full-splice_match	BTBD10	ENST00000528120.5	1662	8	75	-3896	4	3195	multi-exon	FALSE	canonical	1	25945	junction_1	64984.230739276354	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	175	1458	50.0	-1	True	NA	NA
PB.12292.4	chrX	-	5227	21	full-splice_match	ARHGEF6	ENST00000370620.5	4764	21	-472	9	-472	-9	multi-exon	FALSE	canonical	1	32070	junction_6	84798.93898585938	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	886	2754	35.0	-1	True	AATAAA	-11
PB.10571.9	chr7	-	2403	11	novel_in_catalog	GUSB	novel	2300	12	NA	NA	0	2	intron_retention	FALSE	canonical	1	370936	junction_6	192993.2251634756	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	33	1196	35.0	-3	True	AATAAA	-40
PB.12292.6	chrX	-	4017	16	novel_not_in_catalog	ARHGEF6	novel	4764	21	NA	NA	56052	-8	any annotated donor/acceptor	FALSE	canonical	1	168	junction_15	103234.86953923186	NA	2	1	TRUE	NA	NA	NA	C	coding	453	1362	182	1543	35.0	NA	False	AATAAA	-12
PB.12292.7	chrX	-	5018	24	novel_not_in_catalog	ARHGEF6	novel	4764	21	NA	NA	1143	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	104468.15342721195	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	64	2544	35.0	-14	True	AATAAA	-12
PB.12292.2	chrX	-	4937	23	novel_not_in_catalog	ARHGEF6	novel	4764	21	NA	NA	1143	-8	any annotated donor/acceptor	FALSE	canonical	1	3975	junction_18	98584.18844121828	NA	3	NA	TRUE	NA	NA	NA	C	coding	799	2400	64	2463	35.0	-14	True	AATAAA	-12
PB.12292.3	chrX	-	5135	22	full-splice_match	ARHGEF6	ENST00000250617.6	6019	22	876	8	876	-8	multi-exon	FALSE	canonical	1	32070	junction_6	79659.74142259525	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	331	2661	35.0	0	True	AATAAA	-12
PB.8323.1	chr3	-	5916	2	incomplete-splice_match	COX17	ENST00000468918.5	555	4	41	9433	-10	4	3prime_fragment	FALSE	canonical	1	489007	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	161	486	1080	1565	5.0	-30	True	AGTAAA	-20
PB.8323.2	chr3	-	2406	2	full-splice_match	COX17	ENST00000497997.1	565	2	-1836	-5	-10	3	multi-exon	FALSE	canonical	1	118182	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-30	True	AGTAAA	-19
PB.11749.4	chr9	-	4857	5	full-splice_match	ASTN2	ENST00000358637.4	3411	5	-12	-1434	1	1434	multi-exon	FALSE	canonical	1	1404	junction_1	45348.59722472129	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	207	791	5.0	-4	True	NA	NA
PB.1290.1	chr10	-	2976	1	antisense	novelGene_CELF2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	107	324	1329	1652	100.0	NA	False	AATGAA	-22
PB.5585.1	chr19	+	1907	6	full-splice_match	IZUMO4	ENST00000478879.5	1925	6	14	4	4	1	multi-exon	FALSE	canonical	1	99013	junction_5	24112.700907198265	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	74	550	20.0	-42	True	ATTAAA	-22
PB.5585.2	chr19	+	1501	5	novel_in_catalog	IZUMO4	novel	1065	4	NA	NA	5	2	intron_retention	FALSE	canonical	1	99013	junction_4	26157.10415331751	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	73	645	10.0	-41	True	NA	NA
PB.5585.3	chr19	+	2110	6	novel_in_catalog	IZUMO4	novel	1065	4	NA	NA	-14	2	intron_retention	FALSE	canonical	1	15691	junction_3	52560.57675254335	NA	2	NA	TRUE	NA	NA	NA	C	coding	89	270	143	412	20.0	9	True	ATTAAA	-19
PB.5585.4	chr19	+	1887	5	novel_in_catalog	IZUMO4	novel	1065	4	NA	NA	-10	0	intron_retention	FALSE	canonical	1	99013	junction_4	26157.10415331751	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	139	531	20.0	13	True	ATTAAA	-21
PB.11089.7	chr8	+	2345	14	novel_in_catalog	ASH2L	novel	3090	16	NA	NA	-18	1	no_combination_of_known_junctions	FALSE	canonical	1	4553	junction_5	147323.7067979434	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	20	1714	15.0	3	True	AATAAA	-17
PB.1249.5	chr1	-	2464	1	genic	AL390728.4_AL390728.5	novel	NA	NA	NA	NA	-4	2294	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	B	coding	111	336	211	546	25.0	-13	True	AATAAA	-16
PB.11089.6	chr8	+	2693	17	novel_not_in_catalog	ASH2L	novel	3090	16	NA	NA	-20	0	any annotated donor/acceptor	FALSE	canonical	1	1514	junction_1	152849.46473071093	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	459	2063	15.0	1	True	AATAAA	-16
PB.12087.4	chrX	+	2941	4	full-splice_match	FAM156B	ENST00000593751.7	2942	4	1	0	1	0	multi-exon	FALSE	canonical	1	202	junction_1	1398.627184063001	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	1611	2252	40.0	NA	False	AATAAA	-16
PB.1249.4	chr1	-	3845	1	genic	AL390728.4_AL390728.5	novel	NA	NA	NA	NA	-17	3662	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	111	336	224	559	65.0	-26	False	NA	NA
PB.12087.1	chrX	+	1797	4	full-splice_match	FAM156B	ENST00000612188.4	776	4	-78	-943	-78	0	multi-exon	FALSE	canonical	1	178	junction_1	1409.7709033740198	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	467	1108	40.0	NA	False	AATAAA	-16
PB.12087.2	chrX	+	2596	4	novel_not_in_catalog	FAM156B	novel	858	4	NA	NA	-73	1	any annotated donor/acceptor	FALSE	canonical	1	107	junction_1	1442.7532321533329	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	1265	1906	35.0	NA	False	AATAAA	-17
PB.12087.3	chrX	-	3380	4	full-splice_match	FAM156A	ENST00000619586.4	865	4	-1196	-1319	3	0	multi-exon	FALSE	canonical	1	72	junction_3	1500.0894047430047	NA	0	NA	TRUE	NA	NA	NA	A	coding	213	642	2050	2691	40.0	NA	False	AATAAA	-16
PB.9817.3	chr6	+	7552	7	full-splice_match	ZKSCAN8	ENST00000457389.6	2071	7	-94	-5387	-66	-12	multi-exon	FALSE	canonical	1	9608	junction_2	65026.13063329917	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1737	373	2109	10.0	-39	True	NA	NA
PB.1242.2	chr1	+	5123	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-5	9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	71326.6671168645	NA	3	NA	TRUE	NA	NA	NA	B	coding	384	1155	1281	2435	15.0	0	True	AATAAA	-26
PB.8681.1	chr4	-	4395	22	full-splice_match	EVC2	ENST00000344408.9	4390	22	8	-13	8	13	multi-exon	FALSE	canonical	1	14742	junction_21	4442.247836032418	NA	1	NA	TRUE	NA	NA	NA	A	coding	1308	3927	47	3973	25.0	-1	True	AATAAA	-29
PB.6737.3	chr2	-	3794	19	novel_in_catalog	SMPD4	novel	3614	17	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	1	7793	junction_8	187510.09378565778	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	112	2646	10.0	0	True	AATAAA	-19
PB.6756.12	chr2	+	4306	24	novel_not_in_catalog	R3HDM1	novel	539	3	NA	NA	11	-3	any annotated donor/acceptor	FALSE	canonical	1	5477	junction_12	116557.03193018555	NA	1	NA	TRUE	NA	NA	NA	C	coding	976	2931	406	3336	30.0	-14	True	AATAAA	-8
PB.4914.5	chr17	+	2161	16	full-splice_match	TAF15	ENST00000605844.5	2191	16	29	1	0	-1	multi-exon	FALSE	canonical	1	1267990	junction_1	406900.70337463584	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	1225	2022	25.0	0	True	AATAAA	-27
PB.4914.4	chr17	+	2327	1	full-splice_match	TAF15	ENST00000604434.1	2103	1	2	-226	0	226	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	NA	NA
PB.10820.1	chr7	+	1075	6	full-splice_match	ARF5	ENST00000000233.9	1103	6	23	5	-18	-5	multi-exon	FALSE	canonical	1	1767186	junction_1	594476.2180314364	NA	0	NA	TRUE	NA	NA	NA	A	coding	180	543	132	674	10.0	-43	True	AATAAA	-17
PB.8461.24	chr3	-	3756	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-2	-1239	any annotated donor/acceptor	FALSE	canonical	1	12859	junction_6	185930.3763524281	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	223	1425	80.0	-19	True	AAAAAG	-18
PB.4914.1	chr17	+	2076	17	novel_not_in_catalog	TAF15	novel	580	4	NA	NA	6	-1	intron_retention	TRUE	non_canonical	0	0	junction_15	598571.2264640587	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	1248	1937	25.0	-7384	False	AATAAA	-27
PB.6756.11	chr2	+	4200	23	full-splice_match	R3HDM1	ENST00000409478.5	4272	23	79	-7	53	3	multi-exon	FALSE	canonical	1	138829	junction_1	90850.89446032843	NA	1	NA	TRUE	NA	NA	NA	C	coding	969	2910	310	3219	15.0	20	False	AATAAA	-19
PB.4914.3	chr17	+	3102	1	full-splice_match	TAF15	ENST00000604434.1	2103	1	0	-999	0	999	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-2	True	NA	NA
PB.4914.2	chr17	+	2070	16	novel_not_in_catalog	TAF15	novel	580	4	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	14262	junction_7	608024.9679448808	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	103	1782	25.0	-7377	False	AATAAA	-19
PB.8297.2	chr3	-	3062	11	full-splice_match	ATG3	ENST00000402314.6	3010	11	-53	1	-6	-1	multi-exon	FALSE	canonical	1	653082	junction_9	175716.41703975757	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	442	1377	10.0	1214	False	AATAAA	-16
PB.1242.7	chr1	+	3643	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	6	-1460	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	71326.6671168645	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1270	2424	85.0	11	True	NA	NA
PB.3163.2	chr13	+	3380	10	full-splice_match	CDADC1	ENST00000251108.10	3386	10	4	2	4	-2	multi-exon	FALSE	canonical	1	32379	junction_6	44444.22179527564	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	110	1654	25.0	4	True	AATAAA	-16
PB.3163.1	chr13	+	2549	6	novel_not_in_catalog	CDADC1	novel	3386	10	NA	NA	-4	-33	intron_retention	FALSE	canonical	1	2407	junction_5	64138.407194441614	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	118	558	75.0	-4	True	AAAACA	-37
PB.7494.1	chr21	+	2603	2	full-splice_match	OLIG2	ENST00000382357.3	2578	2	-44	19	-44	-19	multi-exon	FALSE	canonical	1	63154	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	323	972	289	1260	65.0	-134	False	AATAAA	-21
PB.11226.17	chr8	-	4031	13	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-73	-2	any annotated donor/acceptor	FALSE	canonical	1	2883	junction_11	191955.55145374077	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	181	1935	15.0	2938	False	NA	NA
PB.10940.2	chr7	+	2989	14	novel_in_catalog	GALNT11	novel	580	3	NA	NA	-4	-5	no_combination_of_known_junctions	FALSE	canonical	1	1851	junction_2	134191.4127354684	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	498	2324	20.0	-109	True	AATAAA	-18
PB.1242.9	chr1	+	4862	9	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-11	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	90915.0702007614	NA	3	NA	TRUE	NA	NA	NA	B	coding	384	1155	1028	2182	30.0	1	True	AATAAA	-18
PB.8948.21	chr4	-	2923	2	novel_not_in_catalog	CAMK2D	novel	5294	18	NA	NA	-28772	-81710	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.8948.20	chr4	-	1707	17	full-splice_match	CAMK2D	ENST00000379773.6	1642	17	-65	0	-12	0	multi-exon	FALSE	canonical	1	299502	junction_11	40887.41857661566	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	128	1564	30.0	-12	True	AATAAA	-20
PB.5757.1	chr19	-	2546	22	full-splice_match	HOOK2	ENST00000264827.9	2603	22	58	-1	8	0	multi-exon	FALSE	canonical	1	101452	junction_19	61682.554970155536	NA	2	NA	TRUE	NA	NA	NA	A	coding	717	2154	114	2267	5.0	-11	True	AATAAA	-15
PB.10940.3	chr7	+	2795	13	novel_not_in_catalog	GALNT11	novel	580	3	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	4062	junction_1	120069.62207295839	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	300	2126	15.0	-106	True	AATAAA	-22
PB.6799.9	chr2	+	3342	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	5076	junction_2	257256.6817256648	NA	21	2	TRUE	NA	NA	NA	C	coding	565	1698	412	2109	20.0	-17	True	AATAAA	-18
PB.8580.17	chr3	-	6387	1	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	2	113	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-14	True	NA	NA
PB.6560.24	chr2	-	1873	7	novel_in_catalog	MOB1A	novel	4885	6	NA	NA	-7	-3197	combination_of_known_junctions	FALSE	canonical	1	9777	junction_5	553388.3875826573	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	254	1030	25.0	-8	True	AATAAA	-14
PB.2194.2	chr11	-	2056	9	full-splice_match	PRCP	ENST00000313010.7	3090	9	167	867	0	-1	multi-exon	FALSE	canonical	1	562525	junction_5	201750.13757290848	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	29	1519	10.0	-1	True	AATAAA	-17
PB.2194.1	chr11	-	3566	9	full-splice_match	PRCP	ENST00000313010.7	3090	9	92	-568	-75	568	multi-exon	FALSE	canonical	1	562525	junction_5	201750.13757290848	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	104	1594	20.0	1185	False	AATAAA	-32
PB.9089.2	chr4	-	3508	9	full-splice_match	IRF2	ENST00000393593.7	2303	9	90	-1295	58	1295	multi-exon	FALSE	canonical	1	252609	junction_3	77349.7130407371	NA	3	NA	TRUE	NA	NA	NA	C	coding	349	1050	119	1168	25.0	1	True	AATAAA	-14
PB.12097.3	chrX	+	2360	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	6	4212	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	71155.1098880994	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	134	1882	20.0	-21	True	NA	NA
PB.12097.2	chrX	+	2654	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-2	60492	any annotated donor/acceptor	FALSE	canonical	1	3544	junction_16	70530.12087177718	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	142	1890	15.0	-29	True	NA	NA
PB.12097.1	chrX	+	2484	16	full-splice_match	GNL3L	ENST00000336470.8	2357	16	-21	-106	-21	106	multi-exon	FALSE	canonical	1	87933	junction_1	50118.037005276085	NA	3	NA	TRUE	NA	NA	NA	C	coding	582	1749	161	1909	30.0	2	True	AATAAA	-13
PB.12097.7	chrX	+	3057	18	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-15	4211	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	83751.20636569567	NA	34	2	TRUE	NA	NA	NA	C	coding	582	1749	124	1872	20.0	-11	True	NA	NA
PB.12097.6	chrX	+	2326	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	13	4211	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	71155.1098880994	NA	1	1	TRUE	NA	NA	NA	C	coding	582	1749	127	1875	20.0	-14	True	NA	NA
PB.12097.5	chrX	+	2354	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	7	1548	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	71155.1098880994	NA	1	1	TRUE	NA	NA	NA	C	coding	582	1749	133	1881	65.0	-20	True	AATACA	-34
PB.12097.4	chrX	+	2796	19	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	7	4212	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	92264.11709641104	NA	2	1	TRUE	NA	NA	NA	C	coding	582	1749	133	1881	20.0	-20	True	NA	NA
PB.2033.3	chr11	-	3267	6	novel_not_in_catalog	EHD1	novel	4551	5	NA	NA	-81	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	353198.8736779323	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	159	1763	15.0	-2	True	ATTAAA	-15
PB.12097.9	chrX	+	2334	16	full-splice_match	GNL3L	ENST00000336470.8	2357	16	23	0	-8	0	multi-exon	FALSE	canonical	1	87933	junction_1	50118.037005276085	NA	3	NA	TRUE	NA	NA	NA	C	coding	582	1749	117	1865	100.0	-4	True	NA	NA
PB.12097.8	chrX	+	2293	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-10	4212	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	81681.96009973301	NA	1	1	TRUE	NA	NA	NA	C	coding	582	1749	115	1863	20.0	-6	True	NA	NA
PB.2033.6	chr11	-	2738	6	novel_not_in_catalog	EHD1	novel	4551	5	NA	NA	-81	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	353198.8736779323	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	159	1763	15.0	-2	True	ATTAAA	-15
PB.2033.4	chr11	-	2912	6	novel_not_in_catalog	EHD1	novel	4551	5	NA	NA	16	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	353198.87367793237	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	62	1315	15.0	-1	True	ATTAAA	-15
PB.753.1	chr1	+	2506	12	full-splice_match	SNX27	ENST00000368843.8	7250	12	149	4595	-11	6	multi-exon	FALSE	canonical	1	52388	junction_11	57756.27952493117	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	25	1611	80.0	-11	False	NA	NA
PB.6386.12	chr2	-	2617	5	novel_not_in_catalog	SUPT7L	novel	4488	6	NA	NA	242	-3	intron_retention	FALSE	canonical	1	69635	junction_4	185681.8625162404	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	960	2198	30.0	6	True	AATATA	-11
PB.3301.42	chr14	-	1336	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-3	1	intron_retention	FALSE	canonical	1	120000	junction_7	600174.9202894851	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	168	1049	40.0	13	True	AATAAA	-20
PB.9738.18	chr6	-	2661	7	full-splice_match	NEDD9	ENST00000379446.9	4536	7	12	1863	12	-343	multi-exon	FALSE	canonical	1	215814	junction_6	73740.92941206772	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	156	2660	65.0	-3	True	NA	NA
PB.9738.19	chr6	-	2286	7	incomplete-splice_match	NEDD9	ENST00000504387.5	3211	8	21	3450	5	2590	3prime_fragment	FALSE	canonical	1	41966	junction_5	128861.0233969786	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	342	2285	65.0	-22	True	NA	NA
PB.6386.13	chr2	-	2276	6	full-splice_match	SUPT7L	ENST00000405491.5	2280	6	1	3	1	-3	multi-exon	FALSE	canonical	1	39379	junction_4	177520.79816562342	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	619	1857	30.0	185	False	AATATA	-11
PB.9738.16	chr6	-	2899	7	full-splice_match	NEDD9	ENST00000379446.9	4536	7	12	1625	12	-105	multi-exon	FALSE	canonical	1	215814	junction_6	73740.92941206772	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	156	2660	25.0	-3	True	CATAAA	-9
PB.9738.17	chr6	-	2782	7	full-splice_match	NEDD9	ENST00000379446.9	4536	7	14	1740	-10	-220	multi-exon	FALSE	canonical	1	215814	junction_6	73740.92941206772	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	154	2658	20.0	-1	True	TATAAA	-18
PB.9621.1	chr5	-	3968	1	genic	DUSP1	novel	NA	NA	NA	NA	0	862	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	151	456	1979	2434	90.0	-1	True	AATACA	-6
PB.9738.11	chr6	-	4164	7	full-splice_match	NEDD9	ENST00000379446.9	4536	7	13	359	-11	-351	multi-exon	FALSE	canonical	1	215814	junction_6	73740.92941206772	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	155	2659	65.0	-2	True	TTTAAA	-30
PB.9738.12	chr6	-	3112	8	full-splice_match	NEDD9	ENST00000504387.5	3211	8	2	97	2	-97	multi-exon	FALSE	canonical	1	41966	junction_6	135032.9394266602	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	361	2865	10.0	-41	True	CATAAA	-17
PB.9738.13	chr6	-	2552	6	full-splice_match	NEDD9	ENST00000620854.4	4086	6	12	1522	12	-5	multi-exon	FALSE	canonical	1	1631	junction_5	147455.92129663695	NA	2	NA	TRUE	NA	NA	NA	C	coding	685	2058	156	2213	30.0	-3	True	ATTAAA	-24
PB.8995.4	chr4	-	5155	8	full-splice_match	SETD7	ENST00000274031.7	7365	8	555	1655	-11	-1655	multi-exon	FALSE	canonical	1	220658	junction_7	37037.18554840444	NA	10	1	TRUE	NA	NA	NA	C	coding	360	1083	101	1183	25.0	-1	True	ACTAAA	-18
PB.11050.31	chr8	+	3917	30	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	28846	junction_11	193213.56803391103	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	169	3033	5.0	0	True	ATTAAA	-22
PB.11050.30	chr8	+	4806	3	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	8	10798	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_2	328.5	NA	9	NA	TRUE	NA	NA	NA	C	coding	144	435	551	985	25.0	0	True	NA	NA
PB.6799.2	chr2	+	3591	11	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-14	-8	no_combination_of_known_junctions	FALSE	canonical	1	13273	junction_2	262606.71917100676	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	244	2358	20.0	-31	True	AATAAA	-18
PB.6799.3	chr2	+	3678	12	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-13	-6	no_combination_of_known_junctions	FALSE	canonical	1	15950	junction_3	289449.94298756414	NA	2	NA	TRUE	NA	NA	NA	C	coding	704	2115	329	2443	20.0	-30	True	AATAAA	-20
PB.5577.3	chr19	-	2862	14	novel_in_catalog	ATP8B3	novel	5095	29	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	19239	junction_13	12113.239305055376	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	385	1974	0.0	0	True	NA	NA
PB.5577.2	chr19	-	3059	14	incomplete-splice_match	ATP8B3	ENST00000310127.10	5095	29	-84	16688	-84	1	3prime_fragment	FALSE	canonical	1	11605	junction_12	13136.097459349883	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	324	2171	0.0	9694	False	NA	NA
PB.5577.1	chr19	-	2761	14	full-splice_match	ATP8B3	ENST00000526092.6	2759	14	-2	0	-2	0	multi-exon	FALSE	canonical	1	576	junction_13	15724.042069579857	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	183	1871	0.0	-3	True	NA	NA
PB.11866.19	chr9	-	2776	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-2	67651	-2	-46237	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2589	186	2774	70.0	-2	True	AAAACA	-11
PB.9977.3	chr6	-	2677	10	novel_in_catalog	MOCS1	novel	1527	11	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	1	9057	junction_9	27072.98899796531	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	180	1076	50.0	-1	True	AATAAA	-20
PB.9977.2	chr6	-	2789	11	full-splice_match	MOCS1	ENST00000340692.9	2747	11	-41	-1	-3	1	multi-exon	FALSE	canonical	1	6493	junction_1	25949.771084924814	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	46	1956	50.0	-1	True	AATAAA	-20
PB.9977.1	chr6	-	2851	11	full-splice_match	MOCS1	ENST00000373188.6	3358	11	48	459	-6	7	multi-exon	TRUE	canonical	1	26966	junction_7	21720.77629459868	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	87	1244	40.0	-42	True	AATAAA	-26
PB.2490.2	chr12	+	1705	1	genic	STRAP	novel	NA	NA	NA	NA	-12	-14189	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-9	True	ATTAAA	-13
PB.2490.3	chr12	+	2843	10	full-splice_match	STRAP	ENST00000419869.6	1866	10	-7	-970	-3	970	multi-exon	FALSE	canonical	1	480650	junction_6	400724.28790989064	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	321	1373	30.0	0	True	AATAAA	-22
PB.2490.1	chr12	+	2766	9	novel_in_catalog	STRAP	novel	1698	9	NA	NA	-12	-9	intron_retention	FALSE	canonical	1	480650	junction_6	424774.3869006927	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	330	1277	50.0	-9	True	AATAAA	-9
PB.2490.6	chr12	+	1662	10	full-splice_match	STRAP	ENST00000419869.6	1866	10	195	9	195	-9	multi-exon	FALSE	canonical	1	480650	junction_6	400724.28790989064	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	119	1171	50.0	-2918	False	AATAAA	-9
PB.2490.7	chr12	+	1781	9	novel_in_catalog	STRAP	novel	1698	9	NA	NA	10	-9	combination_of_known_junctions	FALSE	canonical	1	8783	junction_8	528210.3206673308	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	304	1290	50.0	17	True	AATAAA	-9
PB.2490.4	chr12	+	1728	9	full-splice_match	STRAP	ENST00000541731.1	1698	9	-3	-27	-3	-9	multi-exon	FALSE	canonical	1	114608	junction_1	508759.5916779942	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	467	1237	50.0	0	True	AATAAA	-9
PB.2490.5	chr12	+	1902	11	full-splice_match	STRAP	ENST00000025399.10	1442	11	-5	-455	-2	-9	multi-exon	FALSE	canonical	1	3996	junction_1	540888.4575735001	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	320	1411	50.0	1	True	AATAAA	-9
PB.5784.3	chr19	+	2964	22	full-splice_match	PKN1	ENST00000342216.8	2960	22	0	-4	0	3	multi-exon	FALSE	canonical	1	60476	junction_1	477565.2811961942	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2847	32	2878	5.0	-17	True	AAAAAG	-31
PB.5784.2	chr19	+	3035	22	full-splice_match	PKN1	ENST00000242783.10	3069	22	33	1	-29	0	multi-exon	FALSE	canonical	1	232308	junction_1	457998.4477700479	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	133	2961	10.0	-6887	False	AAAAAG	-19
PB.5784.1	chr19	+	2966	22	novel_in_catalog	PKN1	novel	582	4	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	1	1230	junction_1	484769.24102091184	NA	2	NA	TRUE	NA	NA	NA	C	coding	795	2388	505	2892	10.0	-7190	False	AAAAAG	-19
PB.2399.3	chr12	-	4354	7	full-splice_match	PARP11	ENST00000447133.7	4377	7	23	0	11	0	multi-exon	FALSE	canonical	1	37505	junction_6	22323.68756873888	NA	3	NA	TRUE	NA	NA	NA	C	coding	257	774	319	1092	10.0	7898	False	ATTAAA	-18
PB.753.3	chr1	+	2172	12	full-splice_match	SNX27	ENST00000458013.6	6403	12	116	4115	9	454	multi-exon	FALSE	canonical	1	80080	junction_1	44327.631180406155	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	5	1630	70.0	9	True	NA	NA
PB.9822.1	chr6	+	1004	1	antisense	novelGene_ZSCAN31_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-19
PB.995.24	chr1	-	3739	15	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	13	10	intron_retention	FALSE	canonical	1	218703	junction_8	374535.61357249116	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	2557	3465	25.0	592	False	AATAAA	-28
PB.995.25	chr1	-	8118	13	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	-6	10	intron_retention	FALSE	canonical	1	480060	junction_12	349521.47319283383	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	6936	7844	25.0	573	False	AATAAA	-28
PB.995.26	chr1	-	2930	16	full-splice_match	IVNS1ABP	ENST00000459929.5	3657	16	-19	746	-19	10	multi-exon	FALSE	canonical	1	101344	junction_8	412805.49858111143	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	1382	2656	25.0	560	False	AATAAA	-28
PB.995.27	chr1	-	2745	15	novel_not_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	30	10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	406655.1893892467	NA	6	NA	TRUE	NA	NA	NA	C	coding	268	807	538	1344	25.0	-1	True	AATAAA	-28
PB.995.20	chr1	-	3967	15	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	12	237	intron_retention	FALSE	canonical	1	218703	junction_8	374535.61357249116	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	2558	3466	35.0	591	False	ATTAAA	-21
PB.9822.2	chr6	+	2019	1	antisense	novelGene_ZSCAN31_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.995.23	chr1	-	4171	14	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	-12	29	intron_retention	FALSE	canonical	1	480060	junction_13	335929.9970800129	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	2970	3878	20.0	567	False	NA	NA
PB.10315.8	chr6	-	2324	11	novel_in_catalog	TCP1	novel	2499	12	NA	NA	5	8	intron_retention	FALSE	canonical	1	544225	junction_6	806653.4034795613	NA	0	NA	TRUE	NA	NA	NA	B	coding	485	1458	200	1657	20.0	-2	True	ATTAAA	-16
PB.11457.2	chr9	+	1759	2	full-splice_match	LURAP1L	ENST00000319264.3	1753	2	-9	3	-9	-3	multi-exon	FALSE	canonical	1	95404	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	705	1391	10.0	-8832	False	AATAAA	-19
PB.995.29	chr1	-	2597	14	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	-2	5	no_combination_of_known_junctions	FALSE	canonical	1	13604	junction_11	406629.79858676135	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	667	2328	25.0	577	False	AATAAA	-23
PB.8899.1	chr4	+	1571	1	antisense	novelGene_PPP3CA_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.89.5	chr1	-	2777	25	full-splice_match	EXOSC10	ENST00000376936.8	2808	25	25	6	-2	-3	multi-exon	FALSE	canonical	1	361621	junction_24	141768.1774212097	NA	41	4	TRUE	NA	NA	NA	C	coding	885	2658	26	2683	35.0	-6	True	ATTAAA	-11
PB.11726.1	chr9	-	3998	4	novel_in_catalog	INIP	novel	4233	5	NA	NA	8	-7	combination_of_known_junctions	FALSE	canonical	1	29611	junction_1	71525.96030968212	NA	62	1	TRUE	NA	NA	NA	C	coding	100	303	561	863	25.0	17	True	AATAAA	-24
PB.11726.3	chr9	-	2769	5	full-splice_match	INIP	ENST00000374242.8	4233	5	119	1345	0	-1345	multi-exon	FALSE	canonical	1	95380	junction_2	40595.79650037674	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	188	502	90.0	-1	True	TATAAA	-45
PB.11726.2	chr9	-	4105	5	full-splice_match	INIP	ENST00000374242.8	4233	5	121	7	2	-7	multi-exon	FALSE	canonical	1	95380	junction_2	40595.79650037674	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	186	500	25.0	1	True	AATAAA	-24
PB.11726.5	chr9	-	2851	6	novel_in_catalog	INIP	novel	4233	5	NA	NA	0	-1346	combination_of_known_junctions	FALSE	canonical	1	18297	junction_4	66912.20521429555	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	753	1055	85.0	9	True	TATAAA	-44
PB.11726.4	chr9	-	2689	4	novel_in_catalog	INIP	novel	4233	5	NA	NA	-11	-1345	combination_of_known_junctions	FALSE	canonical	1	29611	junction_1	71525.96030968212	NA	3	NA	TRUE	NA	NA	NA	C	coding	100	303	590	892	90.0	-12	True	TATAAA	-45
PB.11726.7	chr9	-	1442	4	full-splice_match	INIP	ENST00000374236.5	874	4	32	-600	0	580	multi-exon	FALSE	canonical	1	16341	junction_3	41329.58185394842	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	589	891	85.0	-1	True	NA	NA
PB.11726.6	chr9	-	1523	5	full-splice_match	INIP	ENST00000374242.8	4233	5	119	2591	0	580	multi-exon	FALSE	canonical	1	95380	junction_2	40595.79650037674	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	188	502	85.0	-1	True	NA	NA
PB.2893.1	chr12	+	3238	20	novel_not_in_catalog	IFT81	novel	3048	12	NA	NA	-20	-1	any annotated donor/acceptor	FALSE	canonical	1	4443	junction_10	51338.155184204385	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	551	1756	40.0	0	True	AATAAA	-26
PB.2893.3	chr12	+	2819	20	novel_not_in_catalog	IFT81	novel	3048	12	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	4443	junction_10	51578.07406339095	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	132	1337	40.0	1	True	AATAAA	-26
PB.2893.2	chr12	+	1885	17	incomplete-splice_match	IFT81	ENST00000552912.5	2710	19	22	13120	-20	-12905	3prime_fragment	FALSE	canonical	1	43288	junction_1	32949.78617859066	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	133	1884	70.0	0	True	NA	NA
PB.2893.5	chr12	+	2939	18	novel_in_catalog	IFT81	novel	3048	12	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	1	7509	junction_8	44535.50844750962	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	1344	2384	45.0	9	True	AATAAA	-22
PB.4317.1	chr16	+	2659	1	novel_in_catalog	PRKCB	novel	2744	17	NA	NA	32420	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1576	False	ATTAAA	-17
PB.4317.2	chr16	+	2222	1	novel_in_catalog	PRKCB	novel	2744	17	NA	NA	32857	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1139	False	ATTAAA	-17
PB.2893.6	chr12	+	3170	20	novel_not_in_catalog	IFT81	novel	3048	12	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	648	junction_14	52660.030313516705	NA	1	1	TRUE	NA	NA	NA	C	coding	529	1590	541	2130	40.0	10	True	AATAAA	-26
PB.2893.9	chr12	+	2596	18	novel_in_catalog	IFT81	novel	3048	12	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	2253	junction_4	46393.437433836865	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	122	2038	40.0	11	True	AATAAA	-25
PB.2893.8	chr12	+	2293	17	incomplete-splice_match	IFT81	ENST00000242591.9	3108	19	-10	13142	-10	-12905	3prime_fragment	FALSE	canonical	1	46078	junction_1	32433.27375641555	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	541	2292	70.0	10	True	NA	NA
PB.9349.30	chr5	-	2762	9	novel_in_catalog	MCTP1	novel	5396	23	NA	NA	0	16207	combination_of_known_junctions	FALSE	canonical	1	6469	junction_4	69714.8571163278	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	164	1234	25.0	-1	True	AATAAA	-12
PB.9349.31	chr5	-	6149	9	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	0	8518	any annotated donor/acceptor	TRUE	canonical	1	13555	junction_1	65437.19665915843	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	164	1105	40.0	-1	True	NA	NA
PB.9349.36	chr5	-	3612	9	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	0	5981	any annotated donor/acceptor	FALSE	canonical	1	13555	junction_1	65437.19665915843	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	164	1105	25.0	-1	True	AATACA	-22
PB.9349.37	chr5	-	2044	10	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	0	4353	any annotated donor/acceptor	FALSE	canonical	1	13555	junction_1	67800.44065536541	NA	4	1	TRUE	NA	NA	NA	C	coding	333	1002	164	1165	25.0	-1	True	NA	NA
PB.9349.34	chr5	-	3832	8	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	-2	6237	any annotated donor/acceptor	FALSE	canonical	1	13555	junction_1	71895.9924471398	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	167	1069	10.0	-4	True	AATAAA	-19
PB.9349.35	chr5	-	3877	10	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	0	6235	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	73336.51138938525	NA	48	4	TRUE	NA	NA	NA	C	coding	168	507	546	1052	5.0	-1	True	AATAAA	-17
PB.9967.1	chr6	+	3338	13	full-splice_match	TBC1D22B	ENST00000373491.3	3462	13	123	1	123	-1	multi-exon	FALSE	canonical	1	99598	junction_8	30020.37353510945	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	24	1541	5.0	-372	False	AATAAA	-19
PB.9967.2	chr6	+	3362	12	novel_in_catalog	TBC1D22B	novel	3462	13	NA	NA	-16	-1	no_combination_of_known_junctions	TRUE	canonical	1	9726	junction_7	48503.743061491725	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	163	1056	5.0	-511	False	AATAAA	-19
PB.9967.3	chr6	+	1912	13	novel_not_in_catalog	TBC1D22B	novel	3462	13	NA	NA	-3	-8335	any annotated donor/acceptor	FALSE	canonical	1	11636	junction_12	45501.67965642099	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	150	1664	70.0	-3	True	NA	NA
PB.4994.1	chr17	-	2242	1	full-splice_match	AC067852.2	ENST00000590513.2	2313	1	15	56	15	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	246	741	1172	1912	10.0	-1	True	NA	NA
PB.9967.5	chr6	+	3333	12	novel_in_catalog	TBC1D22B	novel	3462	13	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	6033	junction_10	50131.948736796185	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	147	1316	5.0	0	True	AATAAA	-19
PB.4994.3	chr17	-	2044	1	full-splice_match	AC067852.2	ENST00000590513.2	2313	1	-44	313	-44	-313	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	246	741	1231	1971	35.0	-60	True	AAAACA	-21
PB.4994.2	chr17	-	2250	1	full-splice_match	AC067852.2	ENST00000590513.2	2313	1	-54	117	-54	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	246	741	1241	1981	15.0	-70	True	AGTAAA	-27
PB.6947.4	chr2	-	1824	12	novel_not_in_catalog	TMEM237	novel	5592	13	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	109770.64633698604	NA	1	1	TRUE	NA	NA	NA	B	coding	203	612	658	1269	60.0	1471	False	AATAAA	-23
PB.426.1	chr1	+	4134	5	full-splice_match	TCEANC2	ENST00000234827.5	10436	5	-37	6339	-20	3250	multi-exon	FALSE	canonical	1	83108	junction_4	19041.66498760022	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	238	864	90.0	-108	False	NA	NA
PB.8128.14	chr3	+	3109	25	full-splice_match	RBM5	ENST00000347869.7	3188	25	15	64	4	0	multi-exon	FALSE	canonical	1	263723	junction_6	279001.9839373876	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	161	2608	15.0	-31	True	AAGAAA	-10
PB.8539.2	chr3	+	4183	10	full-splice_match	TTC14	ENST00000412756.6	4568	10	-79	464	-16	342	multi-exon	FALSE	canonical	1	207959	junction_5	39408.440494986775	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	149	1468	75.0	-137	False	AATATA	-23
PB.8128.15	chr3	+	2938	5	full-splice_match	RBM5	ENST00000469838.5	2716	5	4	-226	4	226	multi-exon	FALSE	canonical	1	485787	junction_1	149435.572052599	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	161	592	45.0	-31	True	NA	NA
PB.8539.3	chr3	+	2880	12	novel_not_in_catalog	TTC14	novel	2881	12	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	20902	junction_10	89877.86687141264	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	149	1453	20.0	-137	False	ATTAAA	-23
PB.7414.1	chr20	+	782	4	full-splice_match	PPDPF	ENST00000370179.7	868	4	41	45	0	-45	multi-exon	FALSE	canonical	1	2865816	junction_1	1155053.3786812145	NA	0	NA	TRUE	NA	NA	NA	A	coding	114	345	156	500	10.0	0	True	AATAAA	-14
PB.8128.13	chr3	+	3639	1	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22531	-7484	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-31	True	NA	NA
PB.981.1	chr1	+	2518	17	incomplete-splice_match	SMG7	ENST00000507469.5	4642	23	-2	8057	1	2	3prime_fragment	FALSE	canonical	1	129392	junction_1	86589.31956870371	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2397	121	2517	55.0	-6	True	NA	NA
PB.3098.9	chr13	-	1958	6	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	1	180	intron_retention	FALSE	canonical	1	306924	junction_5	155890.06678374347	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	100	1851	35.0	10	True	AATAAA	-21
PB.8128.10	chr3	+	2903	6	novel_not_in_catalog	RBM6	novel	2342	21	NA	NA	22527	2375	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	284563.22726550594	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	165	596	45.0	-35	True	NA	NA
PB.3098.5	chr13	-	2748	7	novel_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	74075	junction_6	217632.09216601207	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	89	1840	20.0	-7	True	ATTAAA	-17
PB.8539.6	chr3	+	4476	9	novel_in_catalog	TTC14	novel	2881	12	NA	NA	28	-1	intron_retention	FALSE	canonical	1	8604	junction_4	95853.11715906466	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	725	1294	20.0	-41	True	ATTAAA	-22
PB.3098.6	chr13	-	2778	6	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-8	0	intron_retention	TRUE	canonical	1	306924	junction_5	155890.06678374347	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	119	1870	20.0	-9	True	ATTAAA	-17
PB.3098.1	chr13	-	3838	11	novel_in_catalog	AL137247.1	novel	764	2	NA	NA	-105841	-7429	no_combination_of_known_junctions	FALSE	canonical	1	50237	junction_4	250557.8858148352	NA	0	NA	TRUE	NA	NA	NA	A	coding	1181	3546	86	3631	40.0	-4	True	AATAAA	-20
PB.3098.3	chr13	-	1920	7	full-splice_match	N4BP2L2	ENST00000505213.5	2343	7	53	370	2	-101	multi-exon	FALSE	canonical	1	50237	junction_1	225197.56930945965	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1755	164	1918	75.0	11	True	AAGAAA	-42
PB.1604.1	chr10	+	4697	16	novel_in_catalog	SEMA4G	novel	2024	13	NA	NA	-23	1	intron_retention	FALSE	canonical	1	7497	junction_1	15002.427725612351	NA	3	NA	TRUE	NA	NA	NA	B	coding	843	2532	815	3346	20.0	-9	True	AATAAA	-16
PB.9349.1	chr5	-	4817	21	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	59	combination_of_known_junctions	FALSE	canonical	1	52454	junction_15	37252.94766981534	NA	2	NA	TRUE	NA	NA	NA	C	coding	732	2199	164	2362	35.0	-1	True	AATATA	-25
PB.8539.4	chr3	+	3986	10	full-splice_match	TTC14	ENST00000412756.6	4568	10	-49	631	14	175	multi-exon	FALSE	canonical	1	207959	junction_5	39408.440494986775	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	119	1438	60.0	-107	False	NA	NA
PB.1785.6	chr11	+	2275	5	novel_in_catalog	SMPD1	novel	2452	6	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	11321	junction_2	179085.00337898202	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	122	1885	15.0	4	True	AATAAA	-22
PB.1785.4	chr11	+	2641	5	novel_not_in_catalog	SMPD1	novel	2452	6	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1932	junction_4	199195.63345364778	NA	11	2	TRUE	NA	NA	NA	C	coding	402	1209	132	1340	15.0	-6	True	AATAAA	-20
PB.1785.5	chr11	+	2390	6	novel_not_in_catalog	SMPD1	novel	2452	6	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	7897	junction_5	166278.8161066827	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	129	2003	15.0	-3	True	AATAAA	-19
PB.1785.2	chr11	+	2461	6	full-splice_match	SMPD1	ENST00000534405.5	2446	6	-11	-4	-11	0	multi-exon	TRUE	canonical	1	5564	junction_2	168956.89317976937	NA	4	1	TRUE	NA	NA	NA	C	coding	402	1209	138	1346	15.0	-12	True	AATAAA	-20
PB.1785.3	chr11	+	2576	5	incomplete-splice_match	SMPD1	ENST00000342245.8	2452	6	32	0	-10	0	intron_retention	FALSE	canonical	1	366286	junction_2	45713.94826732318	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	137	1630	15.0	-11	True	AATAAA	-20
PB.1785.1	chr11	+	2412	6	full-splice_match	SMPD1	ENST00000342245.8	2452	6	40	0	-2	0	multi-exon	FALSE	canonical	1	366286	junction_2	41267.78373307682	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	129	2024	15.0	-3	True	AATAAA	-20
PB.1174.1	chr1	-	3566	5	novel_in_catalog	JMJD4	novel	3749	2	NA	NA	-15	-18	intron_retention	FALSE	canonical	1	15598	junction_1	133356.65276618185	NA	17	NA	TRUE	NA	NA	NA	C	coding	311	936	26	961	70.0	-16	True	NA	NA
PB.830.6	chr1	+	1910	8	novel_not_in_catalog	RRNAD1	novel	1802	7	NA	NA	-108	-2	intron_retention	FALSE	canonical	1	50553	junction_7	70324.95114590177	NA	3	1	TRUE	NA	NA	NA	C	coding	443	1332	265	1596	35.0	0	True	ATTAAA	-23
PB.830.5	chr1	+	1795	8	novel_in_catalog	RRNAD1	novel	1802	7	NA	NA	22	4	intron_retention	FALSE	canonical	1	32550	junction_6	81218.59542152214	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	609	1595	15.0	-5024	False	ATTAAA	-18
PB.830.4	chr1	+	1791	8	full-splice_match	RRNAD1	ENST00000368216.8	2254	8	464	-1	-10	1	multi-exon	FALSE	canonical	1	89582	junction_6	67357.11678805736	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	167	1594	10.0	0	True	ATTAAA	-15
PB.240.22	chr1	-	4018	22	full-splice_match	PUM1	ENST00000257075.9	5360	22	-15	1357	-9	-13	multi-exon	FALSE	canonical	1	222948	junction_14	125671.03555923542	NA	0	NA	TRUE	NA	NA	NA	C	coding	1186	3561	110	3670	70.0	3	True	NA	NA
PB.830.2	chr1	+	2055	8	novel_not_in_catalog	RRNAD1	novel	1802	7	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1351	junction_7	82156.2861358317	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	636	1859	10.0	1	True	ATTAAA	-14
PB.830.1	chr1	+	2244	8	novel_not_in_catalog	RRNAD1	novel	1802	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	10586	junction_6	87189.78280317773	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	646	1767	35.0	-9	True	ATTAAA	-23
PB.2017.1	chr11	-	3254	3	incomplete-splice_match	MACROD1	ENST00000542359.5	459	5	-338	139608	-7	126	3prime_fragment	FALSE	canonical	1	301146	junction_2	158137.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	177	534	120	653	40.0	-1	True	ATTAAA	-19
PB.9979.3	chr6	+	3811	10	full-splice_match	NFYA	ENST00000341376.10	3811	10	25	-25	-13	25	multi-exon	FALSE	canonical	1	42647	junction_2	90257.73481536083	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	177	1220	15.0	-5	True	TATAAA	-38
PB.3826.1	chr15	+	1971	1	novel_in_catalog	SERF2	novel	2792	7	NA	NA	7760	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-15	True	NA	NA
PB.977.3	chr1	-	3333	2	novel_in_catalog	RGS16	novel	2427	5	NA	NA	17	-1560	intron_retention	FALSE	canonical	1	165031	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-3	True	NA	NA
PB.3967.2	chr15	+	3382	11	novel_not_in_catalog	CD276	novel	550	3	NA	NA	8	-1	intron_retention	FALSE	canonical	1	993	junction_2	300935.07110619394	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	226	1830	25.0	16	True	AATAAA	-9
PB.10466.3	chr7	-	3365	5	full-splice_match	FKBP14	ENST00000412494.1	703	5	-239	-2423	4	-1661	multi-exon	FALSE	canonical	1	14172	junction_3	84743.65977021526	NA	2	NA	TRUE	NA	NA	NA	C	coding	118	357	151	507	20.0	39	True	NA	NA
PB.3967.1	chr15	+	3298	10	full-splice_match	CD276	ENST00000318443.9	3469	10	170	1	0	-1	multi-exon	TRUE	canonical	1	15730	junction_3	272590.05817369017	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	133	1737	10.0	0	True	AATAAA	-18
PB.7652.1	chr22	+	2306	8	full-splice_match	MMP11	ENST00000215743.7	2291	8	-11	-4	-11	4	multi-exon	TRUE	canonical	1	22363	junction_1	38518.47917558532	NA	2	NA	TRUE	NA	NA	NA	A	coding	488	1467	64	1530	0.0	-41	False	ATTAAA	-20
PB.10466.4	chr7	-	3304	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	-5	1661	-5	-1661	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	182	817	20.0	8	True	NA	NA
PB.10466.7	chr7	-	2299	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	-20	2681	-20	1020	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	197	832	80.0	-7	True	NA	NA
PB.10466.6	chr7	-	3110	5	full-splice_match	FKBP14	ENST00000412494.1	703	5	-285	-2122	-20	1739	multi-exon	FALSE	canonical	1	14172	junction_3	84743.65977021526	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	197	553	50.0	-7	True	AGTAAA	-14
PB.10466.9	chr7	-	1956	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	15	2989	-7	712	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	162	797	35.0	28	True	AGTAAA	-18
PB.10466.8	chr7	-	2135	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	-18	2843	-18	858	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	195	830	65.0	-5	True	NA	NA
PB.241.1	chr1	-	1614	10	full-splice_match	SNRNP40	ENST00000263694.8	1597	10	-19	2	-7	-2	multi-exon	FALSE	canonical	1	299571	junction_3	142837.87627781212	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	39	1112	25.0	-8	True	AATACA	-17
PB.8038.5	chr3	+	3157	16	full-splice_match	CTNNB1	ENST00000396183.7	3268	16	112	-1	8	1	multi-exon	FALSE	canonical	1	945315	junction_15	596681.5845104434	NA	3	NA	TRUE	NA	NA	NA	C	coding	781	2346	174	2519	10.0	-4562	False	ATTAAA	-16
PB.8473.43	chr3	+	5951	11	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	130	0	no_combination_of_known_junctions	FALSE	canonical	1	20416	junction_1	392692.1161204538	NA	6	NA	TRUE	NA	NA	NA	C	coding	400	1203	1336	2538	25.0	-807	False	AATAAA	-37
PB.8344.24	chr3	-	2548	15	novel_not_in_catalog	KPNA1	novel	6830	14	NA	NA	0	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	145829.46977431607	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	71	1687	65.0	2	True	NA	NA
PB.11243.11	chr8	+	2655	18	novel_in_catalog	DPY19L4	novel	680	4	NA	NA	-12	558	no_combination_of_known_junctions	FALSE	canonical	1	774	junction_1	46614.67344830426	NA	5	2	TRUE	NA	NA	NA	C	coding	686	2061	112	2172	30.0	-12	True	AATAAA	-17
PB.3125.17	chr13	-	3070	8	novel_in_catalog	ELF1	novel	3563	9	NA	NA	5	-2	no_combination_of_known_junctions	FALSE	canonical	1	6359	junction_1	293246.17489782214	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	266	1675	20.0	1	True	AATAAA	-16
PB.3125.15	chr13	-	2418	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-2	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	239815.24411003475	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	318	2030	25.0	-1	True	AATAAA	-17
PB.3125.12	chr13	-	2460	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	463	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	259357.85013808028	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	369	2081	25.0	1	True	AATAAA	-8
PB.3125.10	chr13	-	3557	9	full-splice_match	ELF1	ENST00000239882.6	3566	9	12	-3	12	3	multi-exon	FALSE	canonical	1	290146	junction_8	156444.73086285137	NA	28	1	TRUE	NA	NA	NA	C	coding	619	1860	304	2163	15.0	13	True	AATAAA	-15
PB.3125.11	chr13	-	3518	9	novel_in_catalog	ELF1	novel	3563	9	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	1	10156	junction_5	250044.1210986573	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	335	2122	25.0	-18	True	AATAAA	-17
PB.3125.18	chr13	-	4264	8	novel_in_catalog	ELF1	novel	3563	9	NA	NA	2	3	intron_retention	FALSE	canonical	1	290146	junction_7	163955.96302790625	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	1800	2870	15.0	3	True	AATAAA	-15
PB.3125.19	chr13	-	3770	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-10	3	any annotated donor/acceptor	FALSE	canonical	1	2456	junction_9	283799.5578903629	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	517	2376	15.0	-9	True	AATAAA	-15
PB.1174.4	chr1	-	2349	6	novel_not_in_catalog	JMJD4	novel	3749	2	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	14445	junction_2	122434.53174231524	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	11	1192	15.0	-1	True	NA	NA
PB.7277.6	chr20	-	3805	17	novel_not_in_catalog	SAMHD1	novel	5298	16	NA	NA	-4	20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178152.95622353168	NA	2	NA	TRUE	NA	NA	NA	C	coding	626	1881	5	1885	30.0	1	True	AATAAA	-13
PB.7277.7	chr20	-	4369	16	full-splice_match	SAMHD1	ENST00000646673.1	5298	16	220	709	0	37	multi-exon	FALSE	canonical	1	387153	junction_9	121378.43881634553	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	39	1919	75.0	-1	True	NA	NA
PB.7277.4	chr20	-	3884	17	novel_not_in_catalog	SAMHD1	novel	5298	16	NA	NA	1	21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178152.95622353168	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	38	1918	30.0	0	True	AATAAA	-14
PB.7277.5	chr20	-	4542	15	full-splice_match	SAMHD1	ENST00000262878.5	4334	15	135	-343	0	20	multi-exon	FALSE	canonical	1	22488	junction_2	176307.4579306397	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	66	1841	30.0	-1	True	AATAAA	-13
PB.7277.2	chr20	-	2106	5	novel_not_in_catalog	SAMHD1	novel	5298	16	NA	NA	0	26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	216641.4018711278	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	66	614	20.0	-1	True	AATAAA	-19
PB.8462.2	chr3	-	4413	4	novel_in_catalog	COMMD2	novel	3706	5	NA	NA	6	-1	intron_retention	FALSE	canonical	1	232661	junction_3	95329.00244358424	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	989	1363	20.0	5	True	NA	NA
PB.8462.1	chr3	-	5000	5	full-splice_match	COMMD2	ENST00000473414.5	3706	5	11	-1305	1	1305	multi-exon	FALSE	canonical	1	232661	junction_4	82845.13778845141	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	45	644	20.0	0	True	NA	NA
PB.7277.1	chr20	-	4652	16	full-splice_match	SAMHD1	ENST00000646673.1	5298	16	190	456	3	22	multi-exon	FALSE	canonical	1	387153	junction_9	121378.43881634553	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	69	1949	25.0	-4	True	AATAAA	-15
PB.11152.11	chr8	-	4488	22	novel_in_catalog	ASPH	novel	5268	25	NA	NA	4	-669	no_combination_of_known_junctions	FALSE	canonical	1	41825	junction_13	827395.9544395886	NA	7	NA	TRUE	NA	NA	NA	C	coding	710	2133	222	2354	20.0	-1	True	AATAAA	-22
PB.11152.12	chr8	-	4445	23	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-4	-669	combination_of_known_junctions	FALSE	canonical	1	284930	junction_17	749670.433887143	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	221	2311	20.0	0	True	AATAAA	-22
PB.4899.12	chr17	-	2926	1	novel_in_catalog	MYO1D	novel	5563	22	NA	NA	0	-114440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-54	True	NA	NA
PB.11152.14	chr8	-	4596	25	full-splice_match	ASPH	ENST00000379454.8	5268	25	-2	674	-2	-674	multi-exon	FALSE	canonical	1	345915	junction_11	788805.9099981968	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	191	2467	20.0	30	True	AATAAA	-17
PB.11152.15	chr8	-	4661	26	novel_not_in_catalog	ASPH	novel	5268	25	NA	NA	7	-674	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	821878.5664264093	NA	5	2	TRUE	NA	NA	NA	C	coding	768	2307	226	2532	20.0	11	True	AATAAA	-17
PB.8462.9	chr3	-	1544	6	full-splice_match	COMMD2	ENST00000491617.5	885	6	-17	-642	0	642	multi-exon	FALSE	canonical	1	22516	junction_1	156168.74719277222	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	46	453	30.0	-1	True	AATAAA	-18
PB.7277.9	chr20	-	1871	5	novel_not_in_catalog	SAMHD1	novel	5298	16	NA	NA	-4	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	216641.4018711278	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	33	581	80.0	5	True	NA	NA
PB.6134.1	chr19	+	1267	8	full-splice_match	CD37	ENST00000323906.8	1265	8	-6	4	-2	0	multi-exon	FALSE	canonical	1	975002	junction_7	248232.07934906235	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	148	993	30.0	-5034	False	AATAAA	-18
PB.6134.3	chr19	+	3207	6	novel_in_catalog	CD37	novel	1588	9	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1221104	junction_5	186009.12189502965	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	1335	2063	30.0	-14	True	AATAAA	-18
PB.6134.2	chr19	+	3324	5	novel_in_catalog	CD37	novel	1588	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	1221104	junction_4	203303.47032146304	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	1452	2180	30.0	-27	True	AATAAA	-18
PB.6134.5	chr19	+	2626	7	novel_in_catalog	CD37	novel	1588	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	15436	junction_5	574231.3696660567	NA	1	1	TRUE	NA	NA	NA	C	coding	157	474	126	599	30.0	-11	True	AATAAA	-18
PB.6134.4	chr19	+	2084	7	full-splice_match	CD37	ENST00000535669.6	1674	7	-14	-396	-5	-1	multi-exon	FALSE	canonical	1	1221104	junction_6	178988.9388441519	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	129	941	30.0	-14	True	AATAAA	-17
PB.6134.6	chr19	+	2042	7	full-splice_match	CD37	ENST00000598095.5	1598	7	27	-471	-4	1	multi-exon	FALSE	canonical	1	112163	junction_1	551655.7195414596	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	289	897	25.0	-4	True	AATAAA	-19
PB.4433.1	chr16	+	4113	9	full-splice_match	FTO	ENST00000471389.5	11766	9	174	7479	-19	-1	multi-exon	FALSE	canonical	1	208201	junction_2	41515.496323473904	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	49	1566	20.0	-19	False	NA	NA
PB.4433.3	chr16	+	3960	8	novel_in_catalog	FTO	novel	1676	10	NA	NA	-15	-6	no_combination_of_known_junctions	FALSE	canonical	1	2794	junction_5	111263.26522372467	NA	4	1	TRUE	NA	NA	NA	C	coding	457	1374	45	1418	40.0	-15	False	NA	NA
PB.4433.2	chr16	+	4291	10	novel_not_in_catalog	FTO	novel	1676	10	NA	NA	-18	3	any annotated donor/acceptor	FALSE	canonical	1	940	junction_8	123391.20894231855	NA	3	NA	TRUE	NA	NA	NA	C	coding	500	1503	48	1550	15.0	-18	False	NA	NA
PB.4433.5	chr16	+	4126	9	novel_not_in_catalog	FTO	novel	1676	10	NA	NA	-6	-5	any annotated donor/acceptor	FALSE	canonical	1	8139	junction_3	103934.60636373419	NA	2	NA	TRUE	NA	NA	NA	C	coding	515	1548	36	1583	35.0	-6	True	NA	NA
PB.4433.4	chr16	+	6218	8	incomplete-splice_match	FTO	ENST00000636218.1	2227	9	184	-1036	-9	1036	intron_retention	FALSE	canonical	1	208201	junction_2	38031.625707550076	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	39	1418	90.0	-9	True	NA	NA
PB.4433.7	chr16	+	2227	9	full-splice_match	FTO	ENST00000471389.5	11766	9	193	9346	0	-37	multi-exon	FALSE	canonical	1	208201	junction_2	41515.496323473904	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	30	1547	65.0	0	True	NA	NA
PB.4433.6	chr16	+	2484	11	full-splice_match	FTO	ENST00000637845.1	2472	11	-2	-10	0	10	multi-exon	FALSE	canonical	1	3179	junction_9	122505.43699301676	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	30	1631	85.0	0	True	NA	NA
PB.3339.15	chr14	+	3812	15	full-splice_match	DCAF11	ENST00000446197.7	4299	15	494	-7	-1	5	multi-exon	FALSE	canonical	1	230887	junction_1	161270.08367325785	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	234	1874	5.0	15	True	NA	NA
PB.3339.14	chr14	+	3255	15	full-splice_match	DCAF11	ENST00000559115.5	2711	15	169	-713	5	-498	multi-exon	FALSE	canonical	1	97131	junction_1	188593.1289582558	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	182	1822	65.0	-16	True	NA	NA
PB.3339.17	chr14	+	4223	14	novel_in_catalog	DCAF11	novel	849	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	230887	junction_1	147877.71819650827	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	2262	3503	5.0	0	True	AATAAA	-16
PB.3339.16	chr14	+	2448	15	novel_not_in_catalog	DCAF11	novel	849	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	209753.7221009658	NA	2	1	TRUE	NA	NA	NA	C	coding	546	1641	87	1727	5.0	16	True	AATAAA	-17
PB.3339.11	chr14	+	2692	15	novel_in_catalog	DCAF11	novel	849	7	NA	NA	2	-2	intron_retention	FALSE	canonical	1	2130	junction_1	252963.23474036937	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	466	1974	5.0	-30	True	AATAAA	-14
PB.3339.10	chr14	+	2593	15	full-splice_match	DCAF11	ENST00000446197.7	4299	15	495	1211	0	0	multi-exon	FALSE	canonical	1	230887	junction_1	161270.08367325785	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	233	1873	5.0	16	True	AATAAA	-16
PB.3339.13	chr14	+	2546	15	full-splice_match	DCAF11	ENST00000559115.5	2711	15	166	-1	2	0	multi-exon	FALSE	canonical	1	97131	junction_1	188593.1289582558	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	185	1825	5.0	-19	True	AATAAA	-17
PB.3339.12	chr14	+	3773	15	full-splice_match	DCAF11	ENST00000559115.5	2711	15	158	-1220	5	7	multi-exon	FALSE	canonical	1	97131	junction_1	188593.1289582558	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	193	1833	5.0	-27	True	NA	NA
PB.5436.4	chr18	+	3841	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	137	1853	-40	-1853	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	1	NA	TRUE	NA	NA	NA	C	coding	1118	3357	73	3429	20.0	2	True	ATTAAA	-14
PB.805.1	chr1	-	3056	3	novel_in_catalog	ASH1L	novel	11942	28	NA	NA	-27	1442	no_combination_of_known_junctions	FALSE	canonical	1	17656	junction_2	95134.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	967	2901	156	3056	70.0	-33	False	NA	NA
PB.10757.2	chr7	+	2011	8	full-splice_match	FAM185A	ENST00000420217.1	1958	8	-49	-4	-10	3	multi-exon	FALSE	canonical	1	930	junction_6	30304.038965666823	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	823	1185	25.0	-9499	False	AATAAA	-22
PB.10757.3	chr7	+	2201	8	full-splice_match	FAM185A	ENST00000413034.2	1179	8	-224	-798	6	-24	multi-exon	FALSE	canonical	1	930	junction_6	29998.575617205966	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	225	1403	65.0	-9476	False	NA	NA
PB.11053.4	chr8	-	3470	7	full-splice_match	CCDC25	ENST00000520202.5	1734	7	-2	-1734	-1	0	multi-exon	FALSE	canonical	1	47488	junction_4	107539.61715675867	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-15	True	AATAAA	-19
PB.10757.1	chr7	+	4782	1	genic	FAM185A	novel	NA	NA	NA	NA	-12	-1659	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	152	459	250	708	80.0	-9501	False	NA	NA
PB.11053.2	chr8	-	3580	8	full-splice_match	CCDC25	ENST00000520486.5	3586	8	6	0	6	0	multi-exon	FALSE	canonical	1	47488	junction_5	109663.15706279658	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	260	682	30.0	-21	True	AATAAA	-19
PB.9109.1	chr4	-	3582	1	antisense	novelGene_LINC01060_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.10757.4	chr7	+	2686	2	incomplete-splice_match	FAM185A	ENST00000442873.5	2217	8	28	55486	-11	-1660	3prime_fragment	FALSE	canonical	1	5383	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	144	435	210	644	80.0	-16	True	NA	NA
PB.11053.1	chr8	-	3607	9	full-splice_match	CCDC25	ENST00000356537.8	3626	9	12	7	5	0	multi-exon	FALSE	canonical	1	163559	junction_2	93892.49118331762	NA	3	NA	TRUE	NA	NA	NA	C	coding	208	627	83	709	30.0	4	True	AATAAA	-19
PB.240.21	chr1	-	3694	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-2	-12	combination_of_known_junctions	FALSE	canonical	1	34118	junction_8	166643.72334066467	NA	3	NA	TRUE	NA	NA	NA	C	coding	1080	3243	103	3345	70.0	10	True	NA	NA
PB.9830.1	chr6	-	2695	8	novel_not_in_catalog	ZNF311	novel	2730	7	NA	NA	-295	-3	any annotated donor/acceptor	FALSE	canonical	1	2887	junction_7	4541.4340538321285	NA	2	1	TRUE	NA	NA	NA	B	coding	691	2076	407	2482	10.0	0	True	NA	NA
PB.11053.8	chr8	-	1717	7	full-splice_match	CCDC25	ENST00000520202.5	1734	7	14	3	2	-3	multi-exon	FALSE	canonical	1	47488	junction_4	107539.61715675867	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	1	True	AATAAA	-20
PB.9830.2	chr6	-	2621	8	novel_not_in_catalog	ZNF311	novel	2730	7	NA	NA	-296	-3	any annotated donor/acceptor	FALSE	canonical	1	2887	junction_7	4279.943181007554	NA	7	NA	TRUE	NA	NA	NA	B	coding	666	2001	408	2408	10.0	-1	True	NA	NA
PB.12234.4	chrX	+	2261	3	novel_in_catalog	SLC25A43	novel	2783	5	NA	NA	-64	-4	no_combination_of_known_junctions	FALSE	canonical	1	574	junction_1	70528.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	89	559	50.0	-36	True	ATTAAA	-11
PB.12234.5	chrX	+	2400	5	novel_not_in_catalog	SLC25A43	novel	2783	5	NA	NA	-43	-4	any annotated donor/acceptor	FALSE	canonical	1	404	junction_2	51797.249730922005	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	68	997	50.0	-15	True	ATTAAA	-11
PB.12234.6	chrX	+	2461	5	full-splice_match	SLC25A43	ENST00000217909.7	2783	5	312	10	-8	-4	multi-exon	FALSE	canonical	1	96842	junction_1	20363.70247984143	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	33	1058	50.0	20	True	ATTAAA	-11
PB.7521.3	chr21	+	2543	10	full-splice_match	ETS2	ENST00000360938.7	3766	10	65	1158	-55	-1158	multi-exon	FALSE	canonical	1	330020	junction_1	220963.51802794042	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	226	1635	30.0	-5799	False	AGTAAA	-26
PB.12239.20	chrX	-	2380	9	incomplete-splice_match	SEPT6	ENST00000343984.5	2693	10	185	10659	185	518	3prime_fragment	FALSE	canonical	1	639407	junction_8	180102.7407897625	NA	2	NA	TRUE	NA	NA	NA	C	coding	427	1284	81	1364	90.0	5	True	NA	NA
PB.12234.1	chrX	+	2288	4	full-splice_match	SLC25A43	ENST00000493093.5	896	4	-106	-1286	-77	-4	multi-exon	FALSE	canonical	1	6957	junction_1	56311.15791741456	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	415	885	50.0	-8635	False	ATTAAA	-11
PB.12234.2	chrX	+	2696	6	novel_in_catalog	SLC25A43	novel	2783	5	NA	NA	-70	-4	no_combination_of_known_junctions	FALSE	canonical	1	3597	junction_4	61209.59764154638	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	95	865	50.0	-42	True	ATTAAA	-11
PB.12234.3	chrX	+	2103	3	novel_in_catalog	SLC25A43	novel	2783	5	NA	NA	-65	-4	no_combination_of_known_junctions	FALSE	canonical	1	3839	junction_1	68895.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	59	180	521	700	50.0	-37	True	ATTAAA	-11
PB.8549.1	chr3	+	2733	3	novel_not_in_catalog	B3GNT5	novel	550	3	NA	NA	-1406	-23	any annotated donor/acceptor	FALSE	canonical	1	2171	junction_1	12968.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	108	327	447	773	70.0	12	True	NA	NA
PB.805.4	chr1	-	2488	4	novel_in_catalog	ASH1L	novel	11942	28	NA	NA	-91	667	combination_of_known_junctions	FALSE	canonical	1	8632	junction_3	83461.60021763835	NA	0	NA	TRUE	NA	NA	NA	B	coding	708	2124	363	2486	80.0	-97	False	NA	NA
PB.7113.2	chr2	-	2492	12	full-splice_match	STK25	ENST00000316586.8	4619	12	88	2039	3	-6	multi-exon	FALSE	canonical	1	239768	junction_11	348224.2066997251	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	263	1543	5.0	-21	True	AATAAA	-34
PB.10351.8	chr7	+	2171	5	incomplete-splice_match	DNAAF5	ENST00000403952.3	1907	6	156	4952	156	1108	3prime_fragment	FALSE	canonical	1	12379	junction_1	163637.68912829953	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	518	1294	20.0	NA	False	NA	NA
PB.214.5	chr1	+	3453	8	full-splice_match	FAM76A	ENST00000373949.5	2273	8	-30	-1150	2	-8	multi-exon	FALSE	canonical	1	10539	junction_1	42958.11049886451	NA	5	NA	TRUE	NA	NA	NA	C	coding	278	837	84	920	25.0	14	True	AATAAA	-16
PB.7426.1	chr20	+	5397	6	full-splice_match	DNAJC5	ENST00000470551.1	5287	6	-116	6	-116	-6	multi-exon	FALSE	canonical	1	24191	junction_1	146064.0348011789	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	270	773	20.0	-9341	False	AATAAA	-35
PB.214.3	chr1	+	2030	9	full-splice_match	FAM76A	ENST00000373954.10	3567	9	17	1520	0	129	multi-exon	FALSE	canonical	1	10539	junction_1	37306.46230024197	NA	2	NA	TRUE	NA	NA	NA	C	coding	307	924	86	1009	25.0	12	True	AATAAA	-15
PB.214.2	chr1	+	1960	8	full-splice_match	FAM76A	ENST00000373949.5	2273	8	-46	359	3	132	multi-exon	FALSE	canonical	1	10539	junction_1	42958.11049886451	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	100	936	20.0	-2	True	AATAAA	-18
PB.214.1	chr1	+	2933	8	full-splice_match	FAM76A	ENST00000530324.5	1027	8	-67	-1839	-18	130	multi-exon	TRUE	canonical	1	10539	junction_1	38729.490310014015	NA	4	NA	TRUE	NA	NA	NA	C	coding	288	867	121	987	25.0	-23	True	AATAAA	-16
PB.5990.1	chr19	+	5442	17	novel_not_in_catalog	PLEKHG2	novel	8132	19	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_14	64193.75813881265	NA	3	1	TRUE	NA	NA	NA	B	coding	783	2352	2871	5222	25.0	1	True	NA	NA
PB.4011.1	chr15	-	2835	14	full-splice_match	ACSBG1	ENST00000258873.8	6357	14	143	3379	10	7	multi-exon	FALSE	canonical	1	16011	junction_12	11011.451290124882	NA	0	NA	TRUE	NA	NA	NA	A	coding	724	2175	64	2238	30.0	-35	True	ATTAAA	-19
PB.9159.20	chr5	+	2504	5	novel_not_in_catalog	PURPL	novel	1610	3	NA	NA	-6	668	any annotated donor/acceptor	FALSE	canonical	1	5516	junction_3	17383.04510866839	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	NA	NA
PB.10994.4	chr8	+	3659	14	novel_in_catalog	VPS37A	novel	4906	12	NA	NA	0	205	combination_of_known_junctions	FALSE	canonical	1	7099	junction_13	110816.25129185112	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	315	1508	15.0	-27	True	NA	NA
PB.9159.21	chr5	+	5712	1	novel_in_catalog	PURPL	novel	1610	3	NA	NA	-2	-7170	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	4	True	NA	NA
PB.6106.2	chr19	+	4377	18	novel_in_catalog	DHX34	novel	4372	17	NA	NA	41	-29	combination_of_known_junctions	FALSE	canonical	1	40553	junction_1	65223.529291815204	NA	1	NA	TRUE	NA	NA	NA	C	coding	883	2652	309	2960	70.0	7	True	AATAAA	-44
PB.6106.3	chr19	+	3986	18	novel_in_catalog	DHX34	novel	4372	17	NA	NA	34	-2	combination_of_known_junctions	TRUE	canonical	1	40553	junction_1	65223.529291815204	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	316	2967	25.0	0	True	AATAAA	-15
PB.6106.1	chr19	+	4261	17	full-splice_match	DHX34	ENST00000328771.8	4372	17	34	77	34	-77	multi-exon	FALSE	canonical	1	40553	junction_1	63284.9030478624	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3432	316	3747	65.0	0	True	NA	NA
PB.6106.4	chr19	+	3918	17	full-splice_match	DHX34	ENST00000328771.8	4372	17	34	420	34	5	multi-exon	FALSE	canonical	1	40553	junction_1	63284.9030478624	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3432	316	3747	10.0	0	True	AATAAA	-22
PB.7040.6	chr2	-	2379	6	novel_not_in_catalog	AP1S3	novel	1785	5	NA	NA	1	-19	any annotated donor/acceptor	FALSE	canonical	1	1278	junction_2	48916.82869524557	NA	3	NA	TRUE	NA	NA	NA	C	coding	109	330	152	481	95.0	-20	True	NA	NA
PB.7040.7	chr2	-	2104	5	novel_not_in_catalog	AP1S3	novel	1785	5	NA	NA	-123	-19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	45498.5916231206	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	180	False	NA	NA
PB.6638.8	chr2	-	3363	8	incomplete-splice_match	KANSL3	ENST00000597150.5	2811	21	31293	-2310	-193	-28	5prime_fragment	FALSE	canonical	1	32200	junction_7	95751.95845729821	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	10	954	75.0	2921	False	NA	NA
PB.7040.5	chr2	-	2185	4	novel_in_catalog	AP1S3	novel	1785	5	NA	NA	1	-18	no_combination_of_known_junctions	FALSE	canonical	1	3228	junction_1	42202.35856758087	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	152	478	90.0	-20	True	NA	NA
PB.7040.2	chr2	-	2340	6	novel_not_in_catalog	AP1S3	novel	1785	5	NA	NA	4	-1720	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41905.20940217337	NA	3	1	TRUE	NA	NA	NA	C	coding	154	465	129	593	70.0	3	True	NA	NA
PB.4743.9	chr17	+	2946	2	incomplete-splice_match	EIF4A1	ENST00000577929.1	696	3	-1016	-794	0	-175	intron_retention	FALSE	canonical	1	817094	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	2	True	NA	NA
PB.7040.1	chr2	-	2319	6	novel_not_in_catalog	AP1S3	novel	1785	5	NA	NA	1	620	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41905.20940217337	NA	5	1	TRUE	NA	NA	NA	C	coding	154	465	152	616	35.0	-20	True	ATTAAA	-14
PB.5107.6	chr17	+	3571	5	novel_in_catalog	EME1	novel	2354	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	21025	junction_1	47695.34059266167	NA	4	NA	TRUE	NA	NA	NA	C	coding	309	930	54	983	35.0	0	True	AATAAA	-39
PB.5107.7	chr17	+	3328	6	novel_in_catalog	EME1	novel	2354	9	NA	NA	-5	5	intron_retention	FALSE	canonical	1	21025	junction_1	43583.12978848582	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	54	983	40.0	0	True	AATAAA	-23
PB.5107.4	chr17	+	2301	9	full-splice_match	EME1	ENST00000338165.8	2339	9	17	21	-5	3	multi-exon	FALSE	canonical	1	21025	junction_1	35324.8342246641	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	66	1778	35.0	-12	True	AATAAA	-21
PB.4743.8	chr17	+	3340	1	full-splice_match	EIF4A1	ENST00000584798.1	1440	1	-1918	18	0	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.5107.2	chr17	+	3500	6	novel_in_catalog	EME1	novel	2354	9	NA	NA	2	5	intron_retention	FALSE	canonical	1	21025	junction_1	42765.800002338314	NA	3	NA	TRUE	NA	NA	NA	C	coding	380	1143	81	1223	40.0	-27	True	AATAAA	-23
PB.5107.3	chr17	+	3270	7	novel_in_catalog	EME1	novel	2354	9	NA	NA	-7	-4	intron_retention	FALSE	canonical	1	3330	junction_3	50840.33489076911	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	68	1108	35.0	-14	True	AATAAA	-38
PB.7040.8	chr2	-	2053	6	novel_not_in_catalog	AP1S3	novel	1785	5	NA	NA	1	-19	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	41905.20940217337	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	152	616	95.0	-20	True	NA	NA
PB.5107.1	chr17	+	3078	8	novel_in_catalog	EME1	novel	2354	9	NA	NA	2	-3	intron_retention	FALSE	canonical	1	21025	junction_1	37001.93563607621	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	81	1430	35.0	-27	True	AATAAA	-39
PB.705.1	chr1	+	1386	2	full-splice_match	LINC00869	ENST00000620190.1	1260	2	-119	-7	-119	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	36	111	280	390	35.0	NA	False	AATAAA	-24
PB.705.2	chr1	+	3753	2	full-splice_match	LINC00869	ENST00000620190.1	1260	2	-113	-2380	-113	1602	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	36	111	274	384	15.0	NA	False	NA	NA
PB.705.3	chr1	+	3345	1	novel_in_catalog	LINC00869	novel	323	3	NA	NA	249	-35735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	194	585	101	685	30.0	NA	False	AATAAA	-24
PB.705.4	chr1	+	3404	1	novel_in_catalog	LINC00869	novel	323	3	NA	NA	809	-35116	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-14
PB.10351.1	chr7	+	2865	13	full-splice_match	DNAAF5	ENST00000297440.10	3410	13	548	-3	-3	3	multi-exon	FALSE	canonical	1	103029	junction_4	96403.9384400347	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	79	2040	10.0	-3	True	ATTAAA	-18
PB.10747.1	chr7	+	2928	23	full-splice_match	CUX1	ENST00000622516.5	2928	23	-1	1	-1	0	multi-exon	FALSE	canonical	1	293225	junction_14	81881.34084103422	NA	1	NA	TRUE	NA	NA	NA	A	coding	678	2037	25	2061	5.0	-1	True	AATAAA	-15
PB.436.1	chr1	-	3128	6	full-splice_match	PLPP3	ENST00000371250.3	3292	6	162	2	162	-2	multi-exon	FALSE	canonical	1	428568	junction_5	90079.69266466222	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	391	1326	25.0	0	True	AATAAA	-31
PB.10351.2	chr7	+	2412	13	full-splice_match	DNAAF5	ENST00000297440.10	3410	13	550	448	-1	-4	multi-exon	FALSE	canonical	1	103029	junction_4	96403.9384400347	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	77	2038	65.0	-1	True	NA	NA
PB.10351.3	chr7	+	2805	12	incomplete-splice_match	DNAAF5	ENST00000297440.10	3410	13	406	5571	-112	920	3prime_fragment	FALSE	canonical	1	103029	junction_4	98463.121143514	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	221	2116	30.0	-5359	False	AATAAA	-13
PB.4748.1	chr17	+	3543	11	full-splice_match	WRAP53	ENST00000396463.6	1905	11	-1641	3	379	-2	multi-exon	FALSE	canonical	1	139596	junction_1	27351.48604079859	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	1884	3530	20.0	0	True	TATAAA	-13
PB.1259.4	chr1	-	2084	11	novel_in_catalog	ZNF692	novel	2704	10	NA	NA	63	1	intron_retention	FALSE	canonical	1	80553	junction_9	148526.22547580613	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	934	1881	25.0	-2	True	AATAAA	-16
PB.4743.3	chr17	+	3149	10	novel_in_catalog	SENP3-EIF4A1	novel	3519	21	NA	NA	9539	288	intron_retention	FALSE	canonical	1	817094	junction_1	1546796.2477721572	NA	2	NA	TRUE	NA	NA	NA	B	coding	390	1173	1460	2632	5.0	0	True	AATAAA	-15
PB.1259.6	chr1	-	1999	12	full-splice_match	ZNF692	ENST00000306601.8	1931	12	-71	3	1	0	multi-exon	FALSE	canonical	1	80553	junction_9	159259.76255406404	NA	6	NA	TRUE	NA	NA	NA	C	coding	519	1560	239	1798	25.0	-28	False	AATAAA	-14
PB.1259.7	chr1	-	2545	9	novel_not_in_catalog	ZNF692	novel	2704	10	NA	NA	-7	0	intron_retention	FALSE	canonical	1	1329	junction_5	199231.27220044893	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	1619	2344	25.0	-8	True	AATAAA	-14
PB.780.36	chr1	-	6376	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-16	3	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	446909.5273040992	NA	2	NA	TRUE	NA	NA	NA	C	coding	905	2718	946	3663	85.0	-17	True	AATATA	-11
PB.3254.1	chr13	-	2490	2	full-splice_match	IRS2	ENST00000375856.4	8138	2	3101	2547	3101	-2547	multi-exon	FALSE	canonical	1	254072	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	124	1431	85.0	4401	False	AATAAA	-33
PB.1259.2	chr1	-	2468	10	novel_in_catalog	ZNF692	novel	2704	10	NA	NA	-63	1	intron_retention	FALSE	canonical	1	80553	junction_8	155448.5292200176	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	615	1499	25.0	30	True	AATAAA	-18
PB.4743.2	chr17	+	3185	1	full-splice_match	EIF4A1	ENST00000584798.1	1440	1	-1920	175	0	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.8128.22	chr3	+	2395	18	novel_not_in_catalog	RBM5	novel	3188	25	NA	NA	370	-3	any annotated donor/acceptor	FALSE	canonical	1	8405	junction_10	354191.1080776693	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	185	1897	20.0	-8987	False	AAGAAA	-7
PB.10351.6	chr7	+	1906	6	full-splice_match	DNAAF5	ENST00000403952.3	1907	6	-14	15	-14	-2	multi-exon	FALSE	canonical	1	12379	junction_1	148226.4824956728	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	688	1530	70.0	NA	False	NA	NA
PB.9088.2	chr4	-	1918	2	incomplete-splice_match	LINC02362	ENST00000608785.1	516	4	2	4976	2	-4976	3prime_fragment	FALSE	canonical	1	23927	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-3	True	NA	NA
PB.5482.1	chr18	+	4760	6	full-splice_match	MAPK4	ENST00000400384.6	4770	6	9	1	9	-1	multi-exon	FALSE	canonical	1	13355	junction_1	21346.27614362749	NA	0	NA	TRUE	NA	NA	NA	A	coding	587	1764	1028	2791	30.0	-7	True	AATAAA	-16
PB.9311.11	chr5	-	5084	6	novel_not_in_catalog	LHFPL2	novel	4680	3	NA	NA	65	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	61577.33322708933	NA	25	3	TRUE	NA	NA	NA	C	coding	218	657	762	1418	20.0	11	True	ATTAAA	-17
PB.180.2	chr1	-	1371	7	full-splice_match	SYF2	ENST00000236273.8	1345	7	-28	2	-19	-2	multi-exon	TRUE	canonical	1	867653	junction_2	181860.84189444288	NA	0	NA	TRUE	NA	NA	NA	A	coding	243	732	55	786	30.0	3737	False	AATAAA	-21
PB.9055.4	chr4	+	2979	2	incomplete-splice_match	MSMO1	ENST00000504317.1	1026	5	-39	4405	-4	2610	3prime_fragment	FALSE	canonical	1	591155	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-38	True	AGTAAA	-27
PB.11274.28	chr8	-	3447	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	1799488	junction_7	1783819.1420690343	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	506	2416	80.0	-2	True	AAAACA	-5
PB.9311.13	chr5	-	2147	5	full-splice_match	LHFPL2	ENST00000380345.6	5043	5	229	2667	21	928	multi-exon	FALSE	canonical	1	83678	junction_2	22072.3763262477	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	478	1134	55.0	296	False	NA	NA
PB.6555.3	chr2	+	6232	10	full-splice_match	STAMBP	ENST00000339566.7	6277	10	43	2	-3	-2	multi-exon	FALSE	canonical	1	85127	junction_1	138189.91329308596	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	51	1325	35.0	-2	True	NA	NA
PB.9311.12	chr5	-	3958	5	full-splice_match	LHFPL2	ENST00000380345.6	5043	5	-66	1151	4	-1151	multi-exon	FALSE	canonical	1	83678	junction_2	22072.3763262477	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	773	1429	30.0	1	True	AATAAA	-20
PB.8958.1	chr4	-	4338	6	novel_not_in_catalog	MAD2L1	novel	5468	5	NA	NA	8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	124716.47772832586	NA	28	NA	TRUE	NA	NA	NA	C	coding	205	618	117	734	35.0	-62	True	GATAAA	-29
PB.11902.6	chr9	+	3446	11	novel_in_catalog	PMPCA	novel	2174	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	216493	junction_9	211188.42663185878	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	2282	2950	10.0	0	True	AATAAA	-18
PB.399.2	chr1	+	3077	3	full-splice_match	RNF11	ENST00000242719.3	3084	3	4	3	4	-3	multi-exon	FALSE	canonical	1	795200	junction_2	835.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	483	947	40.0	-25	True	AATAAA	-25
PB.10946.3	chr7	+	1479	6	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	-11	-19	combination_of_known_junctions	FALSE	canonical	1	77870	junction_1	572630.1306800403	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	178	1011	85.0	0	True	TTTAAA	-16
PB.711.1	chr1	-	2221	1	full-splice_match	HIST2H2BE	ENST00000369155.3	2194	1	-30	3	-30	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	126	381	43	423	20.0	-1	True	NA	NA
PB.10898.18	chr7	-	4032	9	full-splice_match	TCAF1	ENST00000479870.5	5733	9	-23	1724	20	597	multi-exon	FALSE	canonical	1	1915	junction_2	113190.33107309784	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	233	2998	75.0	-3	True	NA	NA
PB.10898.19	chr7	-	3989	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	-14	597	no_combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	111937.9830764981	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	190	2955	75.0	-15	False	NA	NA
PB.7680.4	chr22	+	2569	9	incomplete-splice_match	KREMEN1	ENST00000327813.9	2719	10	-90	25183	-50	1038	3prime_fragment	FALSE	canonical	1	24500	junction_1	38763.39822544426	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	104	1531	80.0	-7	True	NA	NA
PB.7680.5	chr22	+	2405	8	novel_not_in_catalog	KREMEN1	novel	6138	9	NA	NA	-48	1038	any annotated donor/acceptor	FALSE	canonical	1	423	junction_2	48752.78308790511	NA	2	NA	TRUE	NA	NA	NA	C	coding	421	1266	102	1367	80.0	-5	True	NA	NA
PB.7680.6	chr22	+	6176	9	full-splice_match	KREMEN1	ENST00000400335.8	6138	9	-43	5	-43	-5	multi-exon	FALSE	canonical	1	24500	junction_1	32048.091884502264	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	97	1473	30.0	0	True	AATAAA	-18
PB.7680.7	chr22	+	2977	8	novel_in_catalog	KREMEN1	novel	6138	9	NA	NA	-43	1629	no_combination_of_known_junctions	FALSE	canonical	1	5422	junction_3	47139.019031639866	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	407	1348	75.0	0	True	NA	NA
PB.7680.1	chr22	+	2257	7	novel_in_catalog	KREMEN1	novel	6138	9	NA	NA	-68	1038	no_combination_of_known_junctions	FALSE	canonical	1	3173	junction_3	51252.53168841733	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	122	1219	80.0	-110	False	NA	NA
PB.7680.2	chr22	+	2529	9	full-splice_match	KREMEN1	ENST00000400335.8	6138	9	-61	3670	-61	1038	multi-exon	FALSE	canonical	1	24500	junction_1	32048.091884502264	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	115	1491	80.0	-103	False	NA	NA
PB.7680.3	chr22	+	3110	9	full-splice_match	KREMEN1	ENST00000400335.8	6138	9	-51	3079	-51	1629	multi-exon	FALSE	canonical	1	24500	junction_1	32048.091884502264	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	105	1481	75.0	-8	True	NA	NA
PB.6543.3	chr2	+	2151	11	full-splice_match	MPHOSPH10	ENST00000244230.6	2484	11	332	1	12	-1	multi-exon	FALSE	canonical	1	228418	junction_1	91219.0632190443	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	21	2066	25.0	12	True	AATAAA	-16
PB.6543.2	chr2	+	1763	10	incomplete-splice_match	MPHOSPH10	ENST00000244230.6	2484	11	308	825	-10	-11	3prime_fragment	FALSE	canonical	1	228418	junction_1	91864.87722011426	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1719	45	1763	55.0	-12	True	AATAAA	-43
PB.6543.1	chr2	+	999	2	incomplete-splice_match	MPHOSPH10	ENST00000498451.2	2068	5	-322	5974	-4	283	3prime_fragment	FALSE	canonical	1	228418	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	642	357	998	70.0	-15	True	GATAAA	-35
PB.7680.8	chr22	+	2386	8	novel_in_catalog	KREMEN1	novel	6138	9	NA	NA	-43	1038	no_combination_of_known_junctions	FALSE	canonical	1	5422	junction_3	47139.019031639866	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	407	1348	80.0	0	True	NA	NA
PB.7680.9	chr22	+	2792	8	novel_not_in_catalog	KREMEN1	novel	6138	9	NA	NA	-23935	1629	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	41965.993743233856	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	138	1163	75.0	NA	False	NA	NA
PB.5653.1	chr19	-	2611	4	incomplete-splice_match	TNFSF14	ENST00000599359.1	1476	5	419	-1417	-52	1417	5prime_fragment	FALSE	canonical	1	34626	junction_3	9326.670586132128	NA	1	NA	TRUE	NA	NA	NA	B	coding	240	723	101	823	15.0	-10	True	AATAAA	-21
PB.6543.4	chr2	+	2019	11	full-splice_match	MPHOSPH10	ENST00000244230.6	2484	11	315	150	-3	-150	multi-exon	FALSE	canonical	1	228418	junction_1	91219.0632190443	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1980	38	2017	80.0	-5	True	AGTAAA	-19
PB.5097.4	chr17	-	2514	11	full-splice_match	SPOP	ENST00000347630.6	2965	11	51	400	1	211	multi-exon	FALSE	canonical	1	32742	junction_10	202833.28615592164	NA	3	2	TRUE	NA	NA	NA	C	coding	374	1125	298	1422	10.0	-16	True	TATAAA	-15
PB.8958.3	chr4	-	3938	6	novel_not_in_catalog	MAD2L1	novel	5468	5	NA	NA	3	-391	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	124716.47772832586	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	85	702	30.0	-30	True	AATAAA	-9
PB.5097.5	chr17	-	2432	13	novel_in_catalog	SPOP	novel	2985	11	NA	NA	0	-32	combination_of_known_junctions	FALSE	canonical	1	4087	junction_11	240035.94533300574	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	459	1583	90.0	-3	True	NA	NA
PB.6442.2	chr2	+	1486	14	novel_not_in_catalog	DYNC2LI1	novel	1399	13	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	85784.30446196826	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	70	756	35.0	21	True	AATAAA	-25
PB.6442.1	chr2	+	1390	13	full-splice_match	DYNC2LI1	ENST00000605786.5	1346	13	-33	-11	0	-2	multi-exon	FALSE	canonical	1	83389	junction_6	47820.945396095936	NA	1	1	TRUE	NA	NA	NA	C	coding	352	1059	91	1149	35.0	0	True	AATAAA	-24
PB.4791.4	chr17	+	2564	15	full-splice_match	TRPV2	ENST00000338560.11	2808	15	242	2	242	0	multi-exon	FALSE	canonical	1	160630	junction_7	124641.37374966661	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	158	2452	35.0	1	True	AATATA	-15
PB.7588.9	chr22	+	1499	6	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	-423	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AAGAAA	-13
PB.4791.5	chr17	+	2700	14	novel_in_catalog	TRPV2	novel	2808	15	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	9548	junction_13	127869.86304805755	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	374	2533	35.0	-3	True	AATATA	-15
PB.780.32	chr1	-	6414	15	novel_in_catalog	ADAR	novel	6610	15	NA	NA	1	3	intron_retention	FALSE	canonical	1	223198	junction_8	384412.57413885574	NA	1	NA	TRUE	NA	NA	NA	C	coding	905	2718	984	3701	85.0	0	True	AATATA	-11
PB.7588.3	chr22	+	2895	4	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-26
PB.1353.1	chr10	+	3359	9	full-splice_match	ZEB1	ENST00000361642.9	5990	9	26	2605	-14	-68	multi-exon	FALSE	canonical	1	130574	junction_2	51401.78908304165	NA	1	NA	TRUE	NA	NA	NA	C	coding	1107	3321	38	3358	45.0	-7925	False	NA	NA
PB.7588.1	chr22	+	1128	7	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	75	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	108	327	676	1002	20.0	NA	False	AATAAA	-26
PB.7749.3	chr22	+	2020	3	novel_not_in_catalog	MPST	novel	1345	3	NA	NA	-8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	112872.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	48	920	5.0	-4800	False	AATAAA	-22
PB.2208.3	chr11	+	1666	4	full-splice_match	HIKESHI	ENST00000533986.5	1694	4	52	-24	12	0	multi-exon	FALSE	canonical	1	15263	junction_2	252102.01422440083	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	187	771	25.0	-35	True	AATAAA	-15
PB.2208.2	chr11	+	2429	3	novel_not_in_catalog	HIKESHI	novel	1694	4	NA	NA	-2	-7263	intron_retention	FALSE	canonical	1	990	junction_2	315644.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	125	378	209	586	35.0	1	True	AATAAA	-21
PB.2208.1	chr11	+	1103	5	full-splice_match	HIKESHI	ENST00000278483.7	1113	5	17	-7	-3	7	multi-exon	FALSE	canonical	1	15263	junction_2	229689.266029129	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	210	803	35.0	0	True	AATAAA	-25
PB.5097.1	chr17	-	2410	10	full-splice_match	SPOP	ENST00000504102.5	1865	10	182	-727	3	218	multi-exon	FALSE	canonical	1	238796	junction_9	117088.65094933755	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	187	1311	5.0	-16	True	TATAAA	-22
PB.12316.15	chrX	-	2105	6	novel_in_catalog	MAGEA2	novel	1947	5	NA	NA	41	2	intron_retention	FALSE	canonical	1	24	junction_5	300.38668412564493	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	616	1560	10.0	NA	False	AATAAA	-6
PB.12316.14	chrX	+	2202	4	novel_not_in_catalog	MAGEA2B	novel	1946	5	NA	NA	-14	-10	intron_retention	FALSE	canonical	0	0	junction_1	539.8125188948062	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	713	1657	10.0	NA	False	AATAAA	-6
PB.12316.17	chrX	+	1674	2	full-splice_match	MAGEA12	ENST00000357916.8	1664	2	0	-10	0	10	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	157	1101	15.0	-28	False	AATAAA	-14
PB.12316.16	chrX	+	2118	7	novel_not_in_catalog	MAGEA2B	novel	1946	5	NA	NA	-8	19053	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	620	1564	35.0	NA	False	ATTAAA	-5
PB.12316.11	chrX	+	1923	4	novel_not_in_catalog	MAGEA2B	novel	1946	5	NA	NA	1	19070	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	314	945	408	1352	15.0	NA	False	AATAAA	-12
PB.12316.10	chrX	+	3058	2	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	0	20484	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	314	945	129	1073	10.0	NA	False	NA	NA
PB.12316.13	chrX	-	2095	5	incomplete-splice_match	MAGEA2	ENST00000623438.3	2009	6	75	3	31	-3	intron_retention	FALSE	canonical	0	0	junction_4	361.69876969655286	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	599	1543	15.0	NA	False	AATAAA	-13
PB.12316.12	chrX	+	2347	5	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	10	-3	intron_retention	FALSE	canonical	1	48	junction_2	479.6120176767884	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	851	1795	15.0	NA	False	AATAAA	-13
PB.2639.3	chr12	-	6601	12	full-splice_match	ATF7	ENST00000456903.8	5218	12	4	-1387	0	4	multi-exon	FALSE	canonical	1	39243	junction_11	64659.37567433698	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	68	1519	15.0	-8	True	ATTAAA	-17
PB.2639.2	chr12	-	6682	12	full-splice_match	ATF7	ENST00000420353.6	6680	12	3	-5	3	5	multi-exon	FALSE	canonical	1	100124	junction_3	53604.18886632395	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	148	1599	15.0	-23	True	ATTAAA	-18
PB.2639.1	chr12	-	6753	13	novel_not_in_catalog	AC023509.3	novel	1609	13	NA	NA	-406	-5363	intron_retention	FALSE	canonical	1	978	junction_10	72538.39267640543	NA	3	NA	TRUE	NA	NA	NA	A	coding	451	1356	315	1670	15.0	-4	True	ATTAAA	-18
PB.10898.13	chr7	-	4082	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	33	724	combination_of_known_junctions	FALSE	canonical	1	1087	junction_1	112015.50377284555	NA	2	NA	TRUE	NA	NA	NA	C	coding	919	2760	130	2889	75.0	1	True	NA	NA
PB.12316.19	chrX	+	1987	6	novel_not_in_catalog	MAGEA12	novel	1761	3	NA	NA	-22	11	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	469	1413	15.0	33	False	AATAAA	-15
PB.2639.6	chr12	-	4532	12	full-splice_match	ATF7	ENST00000456903.8	5218	12	6	680	2	-680	multi-exon	FALSE	canonical	1	39243	junction_11	64659.37567433698	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	66	1517	45.0	-6	True	NA	NA
PB.2639.5	chr12	-	4904	12	full-splice_match	ATF7	ENST00000420353.6	6680	12	49	1727	5	-344	multi-exon	FALSE	canonical	1	100124	junction_3	53604.18886632395	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	102	1553	35.0	23	True	NA	NA
PB.5187.6	chr17	-	4627	6	incomplete-splice_match	DDX5	ENST00000577922.5	996	7	442	-3819	0	0	5prime_fragment	FALSE	canonical	1	5032484	junction_5	524212.6967064419	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	171	827	40.0	-1	True	AATAAA	-45
PB.3204.1	chr13	+	1382	1	antisense	novelGene_MYCBP2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.5187.2	chr17	-	3458	12	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	1361	no_combination_of_known_junctions	FALSE	canonical	1	65104	junction_1	1907889.8854538207	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	171	1790	15.0	-1	True	AATAAA	-17
PB.11850.6	chr9	-	5113	15	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-26	8	any annotated donor/acceptor	FALSE	canonical	1	40	junction_1	344709.3768310709	NA	6	1	TRUE	NA	NA	NA	C	coding	593	1782	246	2027	10.0	-1	True	AATAAA	-21
PB.5187.8	chr17	-	4457	8	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_7	509747.4735591724	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	171	1157	40.0	-1	True	AATAAA	-45
PB.5187.9	chr17	-	4538	7	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_6	547607.5566238614	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	171	827	40.0	-1	True	AATAAA	-45
PB.11403.5	chr8	+	3477	15	novel_in_catalog	KIFC2	novel	3566	18	NA	NA	-7	3	intron_retention	FALSE	canonical	1	105875	junction_1	113394.83019756991	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	76	1068	10.0	8	True	AATAAA	-18
PB.1226.17	chr1	-	8098	44	novel_in_catalog	HEATR1	novel	8447	45	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	193779	junction_35	111949.9796121444	NA	5	NA	TRUE	NA	NA	NA	C	coding	1116	3351	4518	7868	20.0	-20	True	AGTAAA	-17
PB.6215.1	chr19	-	3858	19	incomplete-splice_match	PTPRH	ENST00000376350.7	3877	20	2202	0	0	0	5prime_fragment	TRUE	canonical	1	19741	junction_18	9682.787287466403	NA	2	NA	TRUE	NA	NA	NA	B	coding	928	2787	566	3352	25.0	-1	True	ATTAAA	-17
PB.1226.11	chr1	-	6837	45	novel_not_in_catalog	HEATR1	novel	8447	45	NA	NA	-12	6	any annotated donor/acceptor	FALSE	canonical	1	1343	junction_38	121043.25687078091	NA	6	1	TRUE	NA	NA	NA	C	coding	1795	5388	1213	6600	20.0	-29	True	AGTAAA	-24
PB.1243.3	chr1	-	2453	7	novel_in_catalog	TFB2M	novel	1848	8	NA	NA	44	-10	intron_retention	FALSE	canonical	1	83814	junction_5	99257.40116429047	NA	3	NA	TRUE	NA	NA	NA	B	coding	205	618	143	760	40.0	-20	False	ATTAAA	-8
PB.6215.2	chr19	-	3873	19	novel_in_catalog	PTPRH	novel	3877	20	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	14654	junction_18	10408.832666164935	NA	0	NA	TRUE	NA	NA	NA	B	coding	928	2787	583	3369	30.0	3	True	ATTAAA	-15
PB.1226.18	chr1	-	5089	36	incomplete-splice_match	HEATR1	ENST00000366582.7	8447	45	-12	9474	-12	-7808	3prime_fragment	FALSE	canonical	1	193779	junction_27	53899.088068723395	NA	1	NA	TRUE	NA	NA	NA	C	coding	1654	4962	128	5089	60.0	-29	True	NA	NA
PB.9055.1	chr4	+	3577	5	full-splice_match	MSMO1	ENST00000504317.1	1026	5	-31	-2520	4	0	multi-exon	FALSE	canonical	1	591155	junction_1	151451.30454126172	NA	3	NA	TRUE	NA	NA	NA	C	coding	229	690	107	796	25.0	-30	True	ATTAAA	-18
PB.359.5	chr1	+	1923	6	full-splice_match	ATP6V0B	ENST00000498664.1	825	6	-1099	1	-2	0	multi-exon	FALSE	canonical	1	2175388	junction_4	265342.31313787855	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	1160	1636	10.0	-4	True	AATAAA	-20
PB.7107.4	chr2	-	4548	18	full-splice_match	PASK	ENST00000234040.8	4572	18	15	9	-6	-8	multi-exon	FALSE	canonical	1	48342	junction_17	66639.95981297884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1323	3972	119	4090	30.0	-30	True	ATTAAA	-15
PB.7107.6	chr2	-	4339	18	full-splice_match	PASK	ENST00000234040.8	4572	18	42	191	1	5	multi-exon	FALSE	canonical	1	48342	junction_17	66639.95981297884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1323	3972	92	4063	20.0	-3	True	ATTAAA	-24
PB.3232.4	chr13	-	2331	11	novel_in_catalog	STK24	novel	9361	11	NA	NA	-26	-173	combination_of_known_junctions	FALSE	canonical	1	4849	junction_10	347222.92858336703	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	489	1490	20.0	-5	True	TTTAAA	-23
PB.3232.3	chr13	-	2513	11	novel_in_catalog	STK24	novel	9361	11	NA	NA	-37	-2	combination_of_known_junctions	FALSE	canonical	1	4849	junction_10	347222.92858336703	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	500	1501	25.0	-16	True	AATAAA	-15
PB.3232.2	chr13	-	2324	11	full-splice_match	STK24	ENST00000539966.5	9361	11	62	6975	62	-1	multi-exon	FALSE	canonical	1	293627	junction_5	286025.0931041016	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	16	1311	30.0	685	False	AATAAA	-16
PB.3232.1	chr13	-	2432	11	full-splice_match	STK24	ENST00000376547.7	2492	11	59	1	59	-1	multi-exon	TRUE	canonical	1	3077	junction_10	347559.0491295688	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	88	1419	30.0	185	False	AATAAA	-16
PB.9348.3	chr5	+	3557	21	novel_in_catalog	SLF1	novel	5905	21	NA	NA	-1	-222	combination_of_known_junctions	FALSE	canonical	1	12161	junction_11	32238.971866166885	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	1538	3220	20.0	-15	True	AATAAA	-16
PB.9348.2	chr5	+	3631	21	full-splice_match	SLF1	ENST00000265140.9	5905	21	302	1972	-29	-222	multi-exon	FALSE	canonical	1	74942	junction_12	25261.845296612835	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	118	3294	20.0	-4612	False	AATAAA	-16
PB.9348.1	chr5	+	3854	21	full-splice_match	SLF1	ENST00000265140.9	5905	21	297	1754	-34	-4	multi-exon	TRUE	canonical	1	74942	junction_12	25261.845296612835	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	123	3299	30.0	-4617	False	AATAAA	-21
PB.4233.2	chr16	-	1178	2	full-splice_match	TMEM186	ENST00000333050.6	1448	2	-4	274	-4	-274	multi-exon	FALSE	canonical	1	30166	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	39	680	40.0	-14	True	NA	NA
PB.4233.1	chr16	-	2207	1	genic	TMEM186	novel	NA	NA	NA	NA	-8	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	156	471	1235	1705	40.0	-18	True	NA	NA
PB.969.12	chr1	+	3573	11	novel_in_catalog	XPR1	novel	8474	15	NA	NA	5	-5	no_combination_of_known_junctions	FALSE	canonical	1	1032	junction_7	78326.30246628523	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	166	1518	45.0	15	True	AATAAA	-14
PB.8751.6	chr4	-	4356	7	novel_in_catalog	RBM47	novel	4816	6	NA	NA	-12	-71	combination_of_known_junctions	FALSE	canonical	1	3517	junction_5	100470.90218012819	NA	4	NA	TRUE	NA	NA	NA	C	coding	593	1782	423	2204	70.0	-3	True	NA	NA
PB.969.10	chr1	+	5382	15	full-splice_match	XPR1	ENST00000367590.8	8474	15	20	3072	-8	1053	multi-exon	FALSE	canonical	1	188467	junction_7	36179.713793838695	NA	2	NA	TRUE	NA	NA	NA	C	coding	696	2091	179	2269	80.0	2	True	NA	NA
PB.969.11	chr1	+	4347	14	full-splice_match	XPR1	ENST00000367589.3	4126	14	-5	-216	-5	216	multi-exon	FALSE	canonical	1	14360	junction_10	68658.31403949241	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	176	2071	35.0	5	True	AATAAA	-19
PB.5065.30	chr17	-	1293	10	incomplete-splice_match	CDC27	ENST00000527547.5	2579	19	-70	23002	-28	1	3prime_fragment	FALSE	canonical	1	62581	junction_3	82291.36374035195	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1170	123	1292	35.0	-24	True	NA	NA
PB.2166.1	chr11	+	5907	4	full-splice_match	NEU3	ENST00000531509.5	2468	4	383	-3822	-36	-1	multi-exon	FALSE	canonical	1	15404	junction_1	22528.820401136556	NA	2	NA	TRUE	NA	NA	NA	C	coding	451	1356	138	1493	10.0	-2	True	AATAAA	-17
PB.197.11	chr1	+	1872	6	full-splice_match	HMGN2	ENST00000361427.5	1191	6	-13	-668	0	668	multi-exon	FALSE	canonical	1	3908	junction_5	412333.80061954656	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-728	False	AATAAA	-15
PB.7636.3	chr22	-	1946	1	novel_in_catalog	YDJC	novel	1351	5	NA	NA	1	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	108	327	1294	1620	25.0	-16	True	AATAAA	-17
PB.11540.1	chr9	+	2453	1	antisense	novelGene_PAX5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-7245	False	AATAAA	-20
PB.8751.7	chr4	-	4210	7	novel_in_catalog	RBM47	novel	4816	6	NA	NA	12	-71	combination_of_known_junctions	FALSE	canonical	1	29150	junction_2	81666.21328853744	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	484	2058	70.0	21	False	NA	NA
PB.4559.1	chr16	+	979	4	full-splice_match	GABARAPL2	ENST00000037243.6	1002	4	22	1	-2	-1	multi-exon	FALSE	canonical	1	1660562	junction_1	199454.71790358835	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	115	468	15.0	-6	True	AATAAA	-18
PB.11005.9	chr8	+	2813	17	novel_not_in_catalog	INTS10	novel	2804	17	NA	NA	-1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	129455.24638165259	NA	3	NA	TRUE	NA	NA	NA	C	coding	427	1284	1272	2555	45.0	10	True	AATAAA	-16
PB.5006.6	chr17	+	1136	11	full-splice_match	PSME3	ENST00000590720.5	998	11	19	-157	0	40	multi-exon	FALSE	canonical	1	1009540	junction_2	150529.1262753159	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	215	979	10.0	0	True	AATGAA	-19
PB.5006.7	chr17	+	1424	5	novel_not_in_catalog	PSME3	novel	3082	13	NA	NA	0	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	510152.4619578813	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	214	444	20.0	1	True	ATTAAA	-34
PB.4790.1	chr17	+	1737	3	novel_not_in_catalog	UBB	novel	376	2	NA	NA	0	1530	intron_retention	TRUE	non_canonical	0	0	junction_2	15851606.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	101	790	30.0	-4	True	AATAAA	-21
PB.5006.5	chr17	+	2814	12	novel_in_catalog	PSME3	novel	3082	13	NA	NA	-2	8	combination_of_known_junctions	FALSE	canonical	1	1177	junction_1	515068.26200524863	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	564	1145	20.0	-2	True	ATTAAA	-34
PB.5006.2	chr17	+	3073	10	novel_in_catalog	PSME3	novel	3082	13	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	6244	junction_3	432968.6843953749	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	235	894	15.0	-20	True	AATAAA	-22
PB.5006.3	chr17	+	2554	10	novel_in_catalog	PSME3	novel	3082	13	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	6244	junction_3	432968.6843953749	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	235	894	25.0	-20	True	ATTAAA	-25
PB.5006.1	chr17	+	3019	11	novel_in_catalog	PSME3	novel	3082	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	8785	junction_1	412177.4943026487	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	258	839	20.0	-9652	False	AATAAA	-23
PB.3579.1	chr14	+	3339	3	incomplete-splice_match	IFT43	ENST00000556742.1	848	4	-13	33769	1	2871	3prime_fragment	FALSE	canonical	1	339598	junction_1	811.5	NA	35	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-12	True	NA	NA
PB.5006.8	chr17	+	6665	14	novel_in_catalog	PSME3	novel	3082	13	NA	NA	0	6958	no_combination_of_known_junctions	TRUE	canonical	1	14694	junction_11	545341.493093084	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	4027	6297	20.0	1	True	NA	NA
PB.5006.9	chr17	+	2995	11	novel_in_catalog	PSME3	novel	3082	13	NA	NA	298	0	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	410594.2639565366	NA	4	1	TRUE	NA	NA	NA	C	coding	193	582	235	816	15.0	-9195	False	AATAAA	-22
PB.11286.2	chr8	+	3243	7	novel_in_catalog	FZD6	novel	3719	7	NA	NA	-6	3	intron_retention	FALSE	canonical	1	2015	junction_3	107723.09636658964	NA	8	NA	TRUE	NA	NA	NA	C	coding	362	1089	802	1890	30.0	-91	False	AATAAA	-15
PB.3057.1	chr13	-	2358	19	full-splice_match	MIPEP	ENST00000382172.3	2400	19	44	-2	23	2	multi-exon	FALSE	canonical	1	74956	junction_14	44455.01282348035	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	56	2197	5.0	-2	True	AATAAA	-19
PB.11005.8	chr8	+	1947	15	incomplete-splice_match	INTS10	ENST00000397977.7	2804	17	288	7885	-9	-44	3prime_fragment	FALSE	canonical	1	382701	junction_2	49305.9866368131	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1836	111	1946	50.0	2	True	AATAAA	-8
PB.10171.1	chr6	-	2561	1	antisense	novelGene_MARCKS_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	9783	False	AATACA	-19
PB.613.5	chr1	+	1156	7	full-splice_match	ATP5PB	ENST00000369722.7	3156	7	554	1446	5	-5	multi-exon	FALSE	canonical	1	219924	junction_5	879107.9868392006	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	53	823	30.0	-4	True	NA	NA
PB.4223.1	chr16	+	1326	3	full-splice_match	NUDT16L1	ENST00000304301.10	1349	3	8	15	-1	-11	multi-exon	FALSE	canonical	1	300335	junction_2	24755.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	211	636	26	661	5.0	2	True	AATAAA	-17
PB.11286.3	chr8	+	3541	7	full-splice_match	FZD6	ENST00000358755.4	3788	7	-20	267	-20	-225	multi-exon	FALSE	canonical	1	191219	junction_1	51534.50422262954	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	440	2458	50.0	0	True	AATAAA	-23
PB.345.2	chr1	-	2831	10	full-splice_match	SLC2A1	ENST00000426263.8	3670	10	260	579	-48	202	multi-exon	FALSE	canonical	1	1088809	junction_9	363720.8491859426	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	266	1744	30.0	2159	False	AATATA	-19
PB.11126.1	chr8	-	2005	3	full-splice_match	SNAI2	ENST00000020945.3	2010	3	0	5	0	-5	multi-exon	FALSE	canonical	1	284585	junction_1	11277.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	268	807	165	971	30.0	-1	True	AATAAA	-12
PB.11047.1	chr8	-	4723	3	full-splice_match	PNMA2	ENST00000522362.6	4965	3	220	22	0	-22	multi-exon	TRUE	canonical	1	121173	junction_2	11766.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	364	1095	676	1770	35.0	-1	True	NA	NA
PB.6061.4	chr19	-	2887	5	full-splice_match	ZNF112	ENST00000337401.8	3321	5	-5	439	-3	-439	multi-exon	FALSE	canonical	1	8269	junction_4	13358.280117122114	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	95	2836	60.0	-6	True	NA	NA
PB.6061.5	chr19	-	2856	4	full-splice_match	ZNF112	ENST00000354340.8	3654	4	-29	827	-21	-439	multi-exon	FALSE	canonical	1	19096	junction_3	9555.935828350646	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2724	82	2805	60.0	0	True	NA	NA
PB.6061.2	chr19	-	3756	5	full-splice_match	ZNF112	ENST00000337401.8	3321	5	-48	-387	-46	-1	multi-exon	FALSE	canonical	1	8269	junction_4	13358.280117122114	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	138	2879	15.0	-25	False	AATAAA	-14
PB.6061.1	chr19	-	3693	4	full-splice_match	ZNF112	ENST00000354340.8	3654	4	-37	-2	-29	2	multi-exon	FALSE	canonical	1	19096	junction_3	9555.935828350646	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2724	90	2813	5.0	-8	False	AATAAA	-17
PB.8362.23	chr3	-	2889	10	full-splice_match	ZNF148	ENST00000485866.5	2960	10	56	15	-6	-2	multi-exon	FALSE	canonical	1	3795	junction_6	85677.45673551864	NA	2	NA	TRUE	NA	NA	NA	C	coding	794	2382	507	2888	80.0	53	False	NA	NA
PB.8427.1	chr3	-	2650	18	full-splice_match	CEP70	ENST00000484888.5	1993	18	-1	-656	-1	-3	multi-exon	FALSE	canonical	1	43621	junction_16	50986.199904813104	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	189	1982	35.0	28	True	AATAAA	-20
PB.8362.21	chr3	-	2510	6	novel_in_catalog	ZNF148	novel	9651	9	NA	NA	-16	0	intron_retention	FALSE	canonical	1	891	junction_5	84202.17508734557	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	242	2245	80.0	16	False	NA	NA
PB.8362.20	chr3	-	3014	9	full-splice_match	ZNF148	ENST00000484491.5	2952	9	-62	0	2	0	multi-exon	FALSE	canonical	1	23523	junction_6	69434.16795200689	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	365	2749	80.0	-1	True	NA	NA
PB.8362.26	chr3	-	5119	2	novel_not_in_catalog	ZNF148	novel	9651	9	NA	NA	7281	37195	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-15
PB.8362.25	chr3	-	1572	9	novel_not_in_catalog	ZNF148	novel	9651	9	NA	NA	-13	-1200	any annotated donor/acceptor	FALSE	canonical	1	3915	junction_8	72185.94419448983	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1014	559	1572	70.0	NA	False	NA	NA
PB.8362.24	chr3	-	2826	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	43	6782	2	-2	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2382	444	2825	80.0	-1	True	NA	NA
PB.1040.11	chr1	-	5065	28	full-splice_match	KDM5B	ENST00000367264.7	6520	28	11	1444	0	-181	multi-exon	FALSE	canonical	1	16204	junction_22	141106.42776125346	NA	0	NA	TRUE	NA	NA	NA	C	coding	1580	4743	166	4908	75.0	10	True	NA	NA
PB.11286.1	chr8	+	3542	6	novel_in_catalog	FZD6	novel	3719	7	NA	NA	6	2	intron_retention	FALSE	canonical	1	1425	junction_2	118140.21575331577	NA	5	NA	TRUE	NA	NA	NA	C	coding	592	1779	412	2190	35.0	-16	True	AATAAA	-14
PB.10600.2	chr7	-	2218	4	novel_in_catalog	ABHD11	novel	1562	5	NA	NA	6	-3	intron_retention	FALSE	canonical	1	21065	junction_3	135441.67772390693	NA	0	NA	TRUE	NA	NA	NA	A	coding	202	609	540	1148	20.0	7	False	AATAAA	-13
PB.7096.3	chr2	-	8614	1	novel_in_catalog	LINC01107	novel	1975	3	NA	NA	15288	-20463	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	77	234	88	321	30.0	NA	False	NA	NA
PB.7096.2	chr2	-	7608	2	novel_not_in_catalog	LINC01107	novel	1975	3	NA	NA	15288	-20462	any annotated donor/acceptor	FALSE	canonical	1	3525	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	77	234	88	321	30.0	NA	False	NA	NA
PB.7096.1	chr2	-	4126	2	novel_not_in_catalog	LINC01107	novel	1975	3	NA	NA	18770	-20462	any annotated donor/acceptor	FALSE	canonical	1	3525	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.6679.2	chr2	+	3485	10	full-splice_match	LIMS1	ENST00000544547.5	4461	10	56	920	-45	-920	multi-exon	FALSE	canonical	1	2303	junction_2	273977.36567087186	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	174	1166	85.0	11	True	NA	NA
PB.6679.1	chr2	+	1586	10	full-splice_match	LIMS1	ENST00000544547.5	4461	10	71	2804	-30	-14	multi-exon	FALSE	canonical	1	2303	junction_2	273977.36567087186	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	159	1151	85.0	-44	False	NA	NA
PB.11794.1	chr9	+	4863	3	full-splice_match	ZBTB43	ENST00000373464.4	5965	3	-5	1107	4	0	multi-exon	FALSE	canonical	1	70184	junction_1	8391.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	270	1673	85.0	-30	True	NA	NA
PB.8510.19	chr3	+	3746	8	full-splice_match	MYNN	ENST00000349841.9	4999	8	568	685	-6	-685	multi-exon	FALSE	canonical	1	152230	junction_2	34926.75055318032	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	96	1928	35.0	-6	True	ATTAAA	-28
PB.10563.11	chr7	+	5428	6	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	2	53	any annotated donor/acceptor	FALSE	canonical	1	910	junction_2	39912.489677292746	NA	3	1	TRUE	NA	NA	NA	C	coding	783	2352	654	3005	40.0	-4	True	ATTAAA	-17
PB.10563.10	chr7	+	2864	3	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	0	-19694	any annotated donor/acceptor	FALSE	canonical	1	10554	junction_2	25105.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	169	510	1039	1548	20.0	-6	True	NA	NA
PB.6679.7	chr2	+	4328	10	full-splice_match	LIMS1	ENST00000410093.5	1526	10	-12	-2790	-12	0	multi-exon	FALSE	canonical	1	815	junction_1	286745.5898984712	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	112	1089	40.0	2	True	AATAAA	-15
PB.9626.1	chr5	-	1559	4	full-splice_match	BOD1	ENST00000311086.8	1562	4	-5	8	-5	-1	multi-exon	FALSE	canonical	1	312877	junction_3	214007.06216592222	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	230	787	30.0	-16	True	AATAAA	-38
PB.10012.1	chr6	+	1848	1	antisense	novelGene_MRPL14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6958	False	NA	NA
PB.6679.6	chr2	+	3908	11	novel_not_in_catalog	LIMS1	novel	4461	10	NA	NA	8	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	272317.77210376854	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	121	1113	40.0	-6	True	AATAAA	-15
PB.1565.18	chr10	-	4521	16	novel_not_in_catalog	PIK3AP1	novel	4803	17	NA	NA	-3918	-4	any annotated donor/acceptor	FALSE	canonical	1	5951	junction_15	110034.46243839548	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	377	2260	25.0	-128	False	NA	NA
PB.11605.1	chr9	-	2103	13	full-splice_match	ALDH1A1	ENST00000297785.7	2107	13	-1	5	0	-5	multi-exon	FALSE	canonical	1	1404990	junction_8	207564.3844141934	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	57	1562	15.0	-4	True	AATAAA	-20
PB.1565.13	chr10	-	4929	18	novel_not_in_catalog	PIK3AP1	novel	4803	17	NA	NA	-47	-2	any annotated donor/acceptor	FALSE	canonical	1	2609	junction_17	128257.47850147802	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	783	2666	20.0	69	False	NA	NA
PB.3010.1	chr12	-	4521	27	full-splice_match	DHX37	ENST00000308736.6	4550	27	24	5	24	1	multi-exon	FALSE	canonical	1	138250	junction_25	49397.65075439575	NA	3	NA	TRUE	NA	NA	NA	C	coding	1157	3474	76	3549	20.0	33	True	AATAAA	-13
PB.1565.15	chr10	-	4651	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	3	-4	no_combination_of_known_junctions	FALSE	canonical	1	8213	junction_13	128275.2516595812	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	768	2390	25.0	2	True	NA	NA
PB.1565.16	chr10	-	4658	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	-16	-42	no_combination_of_known_junctions	FALSE	canonical	1	9693	junction_1	128245.82245838133	NA	2	NA	TRUE	NA	NA	NA	C	coding	796	2391	137	2527	70.0	-17	True	NA	NA
PB.3010.2	chr12	-	3813	27	full-splice_match	DHX37	ENST00000308736.6	4550	27	4	733	4	43	multi-exon	FALSE	canonical	1	138250	junction_25	49397.65075439575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1157	3474	96	3569	10.0	13	True	NA	NA
PB.5732.4	chr19	+	4369	4	full-splice_match	ZNF441	ENST00000357901.4	4356	4	-20	7	-20	-7	multi-exon	FALSE	canonical	1	32173	junction_1	4546.590004241274	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	123	2204	45.0	2	True	NA	NA
PB.3901.11	chr15	-	4643	29	novel_not_in_catalog	MYO1E	novel	8673	28	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104906.99834082271	NA	5	1	TRUE	NA	NA	NA	C	coding	1108	3327	371	3697	20.0	0	True	AATAAA	-14
PB.3901.12	chr15	-	4516	28	full-splice_match	MYO1E	ENST00000288235.8	8673	28	18	4139	-11	-207	multi-exon	FALSE	canonical	1	252081	junction_27	79609.92430612803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1108	3327	383	3709	30.0	235	False	TATAAA	-36
PB.3901.13	chr15	-	2551	21	incomplete-splice_match	MYO1E	ENST00000288235.8	8673	28	30	41465	1	-2002	3prime_fragment	FALSE	canonical	1	252081	junction_20	88743.99238792167	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2181	371	2551	55.0	0	True	NA	NA
PB.3901.14	chr15	-	3014	20	novel_not_in_catalog	MYO1E	novel	8673	28	NA	NA	1	1418	any annotated donor/acceptor	FALSE	canonical	1	4008	junction_1	102911.97935139602	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	371	2506	5.0	0	True	ATTAAA	-22
PB.3901.15	chr15	-	3803	19	incomplete-splice_match	MYO1E	ENST00000288235.8	8673	28	29	44576	0	1414	3prime_fragment	FALSE	canonical	1	252081	junction_18	68738.82746272748	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	372	2705	15.0	-1	True	ATTAAA	-18
PB.3901.16	chr15	-	3561	19	incomplete-splice_match	MYO1E	ENST00000288235.8	8673	28	29	44818	0	1172	3prime_fragment	FALSE	canonical	1	252081	junction_18	68738.82746272748	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	372	2705	15.0	-1	True	ATTAAA	-35
PB.3901.17	chr15	-	2759	20	novel_not_in_catalog	MYO1E	novel	8673	28	NA	NA	1	1163	any annotated donor/acceptor	FALSE	canonical	1	4008	junction_1	102911.97935139602	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	371	2506	20.0	0	True	ATTAAA	-26
PB.3901.18	chr15	-	3527	18	incomplete-splice_match	MYO1E	ENST00000288235.8	8673	28	29	54432	0	-8442	3prime_fragment	FALSE	canonical	1	252081	junction_17	66708.54588919264	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	372	2279	25.0	-1	True	GATAAA	-31
PB.3901.19	chr15	-	3216	18	incomplete-splice_match	MYO1E	ENST00000288235.8	8673	28	29	54743	0	8320	3prime_fragment	FALSE	canonical	1	252081	junction_17	66708.54588919264	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	372	2279	15.0	-1	True	AATAAA	-20
PB.156.4	chr1	-	1354	3	incomplete-splice_match	LUZP1	ENST00000418342.5	8421	4	5	9198	5	222	3prime_fragment	FALSE	canonical	1	91211	junction_2	31414.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1041	314	1354	60.0	2	True	GATAAA	-11
PB.156.2	chr1	-	7478	4	full-splice_match	LUZP1	ENST00000418342.5	8421	4	2	941	2	-934	multi-exon	FALSE	canonical	1	91211	junction_3	46015.27271098876	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	317	3547	15.0	-1	True	AATAAA	-19
PB.156.3	chr1	-	2535	1	novel_in_catalog	AL031428.1	novel	666	2	NA	NA	559	-64818	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	117	354	513	866	15.0	NA	False	AATAAA	-18
PB.345.3	chr1	-	2858	9	novel_in_catalog	SLC2A1	novel	3670	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	1088809	junction_8	380685.0792164043	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	220	1167	35.0	-3	True	TATAAA	-15
PB.8654.4	chr4	+	2637	2	novel_not_in_catalog	CTBP1-DT	novel	739	2	NA	NA	-11	1162	intron_retention	FALSE	canonical	1	10296	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	823	1173	30.0	-29	True	NA	NA
PB.8654.2	chr4	+	2809	2	full-splice_match	CTBP1-DT	ENST00000514984.1	533	2	-855	-1421	-45	1172	multi-exon	FALSE	canonical	1	9118	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	1233	1598	10.0	-18	True	NA	NA
PB.8654.3	chr4	+	2819	1	full-splice_match	CTBP1-DT	ENST00000357591.2	911	1	-1255	-653	-29	653	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	186	561	1304	1864	60.0	-2	True	ATTAAA	-34
PB.8654.1	chr4	+	3209	1	full-splice_match	CTBP1-DT	ENST00000357591.2	911	1	-1147	-1151	-72	1151	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	186	561	1196	1756	45.0	-6999	False	NA	NA
PB.6261.4	chr19	-	3120	3	full-splice_match	ZNF417	ENST00000312026.5	3597	3	-55	532	-21	-532	multi-exon	FALSE	canonical	1	1396	junction_1	11962.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	575	1728	221	1948	35.0	-40	False	NA	NA
PB.6261.1	chr19	-	4375	4	novel_not_in_catalog	AC010326.2	novel	1020	6	NA	NA	-18	-29011	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	11621.3762906503	NA	1	NA	TRUE	NA	NA	NA	B	coding	575	1728	199	1926	20.0	-18	True	NA	NA
PB.6261.2	chr19	-	3054	4	novel_not_in_catalog	AC010326.2	novel	1020	6	NA	NA	-19	-29015	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	11621.3762906503	NA	2	NA	TRUE	NA	NA	NA	B	coding	575	1728	200	1927	25.0	-19	True	NA	NA
PB.6261.3	chr19	-	4083	4	novel_not_in_catalog	AC010326.2	novel	1020	6	NA	NA	-29	-29016	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	11621.3762906503	NA	7	1	TRUE	NA	NA	NA	B	coding	575	1728	210	1937	25.0	-29	False	NA	NA
PB.7684.2	chr22	+	2948	8	full-splice_match	EWSR1	ENST00000483415.5	3231	8	-45	328	-5	7	multi-exon	FALSE	canonical	1	152248	junction_4	228676.0499750774	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	70	1047	25.0	0	True	ATTAAA	-29
PB.10783.3	chr7	-	6234	28	full-splice_match	NRCAM	ENST00000351718.8	6228	28	-121	115	-63	-115	multi-exon	TRUE	canonical	1	71871	junction_27	65136.22098387622	NA	1	NA	TRUE	NA	NA	NA	C	coding	1178	3537	565	4101	10.0	328	False	ATTAAA	-23
PB.7684.4	chr22	+	2432	17	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	1	89384	junction_14	732244.8352268352	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	69	2078	25.0	1	True	AATAAA	-15
PB.11721.1	chr9	-	2985	17	full-splice_match	SUSD1	ENST00000374270.7	3124	17	138	1	-3	-1	multi-exon	FALSE	canonical	1	53334	junction_16	38942.60089577151	NA	0	NA	TRUE	NA	NA	NA	A	coding	747	2244	36	2279	15.0	1	True	NA	NA
PB.11749.3	chr9	-	2031	8	novel_in_catalog	ASTN2	novel	4747	23	NA	NA	-25	0	intron_retention	FALSE	canonical	1	33289	junction_7	36472.831028935856	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	233	1408	5.0	-30	True	ATTAAA	-18
PB.3222.9	chr13	-	3212	12	novel_not_in_catalog	ABCC4	novel	5856	31	NA	NA	-16216	-1	any annotated donor/acceptor	FALSE	canonical	1	272	junction_11	81670.93982015536	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	367	1473	25.0	NA	False	AATAAA	-18
PB.750.9	chr1	-	4864	19	full-splice_match	POGZ	ENST00000409503.5	4813	19	-326	275	-40	0	multi-exon	FALSE	canonical	1	33806	junction_13	116805.63990179276	NA	0	NA	TRUE	NA	NA	NA	C	coding	1401	4206	356	4561	80.0	-62	True	TTTAAA	-32
PB.12052.2	chrX	+	2478	15	novel_in_catalog	ARAF	novel	2504	16	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_11	175120.83922847884	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	115	1371	5.0	-9	True	NA	NA
PB.7684.6	chr22	+	2044	16	full-splice_match	EWSR1	ENST00000332035.10	1989	16	-57	2	-4	-2	multi-exon	FALSE	canonical	1	44704	junction_5	757978.2673226515	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	69	1871	10.0	1	True	ATTAAA	-14
PB.12052.1	chrX	+	2399	16	full-splice_match	ARAF	ENST00000377045.8	2458	16	66	-7	-39	-1	multi-exon	FALSE	non_canonical	0	0	junction_12	178506.74750774985	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	129	1949	5.0	-23	True	NA	NA
PB.4314.3	chr16	+	3318	6	full-splice_match	DCTN5	ENST00000300087.6	11011	6	110	7583	-9	0	multi-exon	FALSE	canonical	1	321688	junction_3	95215.22404867827	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	42	590	10.0	36	True	AATAAA	-30
PB.4314.2	chr16	+	3400	6	full-splice_match	DCTN5	ENST00000563998.5	878	6	-32	-2490	-32	-11	multi-exon	FALSE	canonical	1	13354	junction_5	188436.21784147547	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	105	563	10.0	8	True	AATAAA	-19
PB.4314.1	chr16	+	3472	7	novel_in_catalog	DCTN5	novel	11011	6	NA	NA	-32	-10	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	188096.21022977988	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	332	754	10.0	8	True	AATAAA	-20
PB.7684.7	chr22	+	4988	16	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	152248	junction_4	705970.3180211852	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	69	1046	10.0	1	True	ATTAAA	-15
PB.4314.6	chr16	+	4676	5	novel_in_catalog	DCTN5	novel	11011	6	NA	NA	-14	-11	intron_retention	FALSE	canonical	1	321688	junction_2	99616.38196225559	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	1537	1959	10.0	31	True	AATAAA	-19
PB.4314.5	chr16	+	1180	6	full-splice_match	DCTN5	ENST00000300087.6	11011	6	79	9752	0	332	multi-exon	FALSE	canonical	1	321688	junction_3	95215.22404867827	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	73	621	15.0	5	True	ATTAAA	-18
PB.4314.4	chr16	+	2655	6	full-splice_match	DCTN5	ENST00000300087.6	11011	6	78	8278	-1	-695	multi-exon	FALSE	canonical	1	321688	junction_3	95215.22404867827	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	74	622	55.0	4	True	NA	NA
PB.168.1	chr1	-	1589	9	full-splice_match	HMGCL	ENST00000374490.7	1600	9	18	-7	-13	7	multi-exon	FALSE	canonical	1	264643	junction_4	74544.82265347138	NA	0	NA	TRUE	NA	NA	NA	A	coding	325	978	27	1004	10.0	-14	True	ATTAAA	-28
PB.777.38	chr1	+	2423	18	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	-23	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	457794.21881638304	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	635	2074	10.0	-443	False	AATAAA	-19
PB.7684.9	chr22	+	5176	16	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	152248	junction_4	705970.3180211852	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	68	1045	5.0	2	True	AATAAA	-24
PB.777.35	chr1	+	3325	25	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	18	-2	any annotated donor/acceptor	FALSE	canonical	1	6063	junction_22	386307.9135554647	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	100	2967	5.0	1	True	AATAAA	-21
PB.777.34	chr1	+	4183	29	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	465558.5385357747	NA	2	1	TRUE	NA	NA	NA	C	coding	1102	3309	318	3626	10.0	0	True	TATAAA	-19
PB.777.37	chr1	+	3530	25	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-122	-6	combination_of_known_junctions	FALSE	canonical	1	55452	junction_1	329142.9562482412	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	235	3183	10.0	-542	False	AATAAA	-17
PB.777.36	chr1	+	3971	28	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	19	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	419904.0323343279	NA	3	NA	TRUE	NA	NA	NA	C	coding	1103	3312	101	3412	5.0	2	True	TATAAA	-21
PB.777.31	chr1	+	2688	18	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-7	-3	no_combination_of_known_junctions	FALSE	canonical	1	21	junction_4	451011.3494375436	NA	1	NA	TRUE	NA	NA	NA	C	coding	737	2214	125	2338	10.0	2	True	AATAAA	-20
PB.777.30	chr1	+	3394	25	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	-7	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	390343.86478171044	NA	5	NA	TRUE	NA	NA	NA	C	coding	972	2919	127	3045	10.0	2	True	AATAAA	-19
PB.777.33	chr1	+	3391	27	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	9	143	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	395172.2624376098	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	111	3314	25.0	-8	True	AATAAA	-22
PB.777.32	chr1	+	5189	26	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	351206.3103640685	NA	5	NA	TRUE	NA	NA	NA	C	coding	1072	3219	127	3345	10.0	2	True	TATAAA	-19
PB.11747.6	chr9	+	3296	8	incomplete-splice_match	TMEM268	ENST00000288502.8	2314	9	5804	-1233	5552	690	5prime_fragment	FALSE	canonical	1	87488	junction_1	30549.51920928327	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	187	1215	30.0	-9898	False	NA	NA
PB.7023.11	chr2	-	3702	16	full-splice_match	ATG9A	ENST00000409033.7	3701	16	-6	5	-3	-3	multi-exon	FALSE	canonical	1	24921	junction_7	151985.90012220066	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	180	1766	10.0	-4	True	AATAAA	-13
PB.524.4	chr1	-	2127	11	full-splice_match	GBP2	ENST00000370466.3	2220	11	28	65	28	52	multi-exon	FALSE	canonical	1	422522	junction_6	170492.76113149204	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	242	2017	25.0	-2	True	ATTAAA	-18
PB.9126.1	chr5	-	1517	3	novel_in_catalog	AC026412.1	novel	1033	5	NA	NA	-3	481	intron_retention	FALSE	canonical	1	32891	junction_1	37819.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	104	315	1	315	10.0	-4	True	TTTAAA	-37
PB.9126.3	chr5	-	1369	3	novel_in_catalog	AC026412.1	novel	1033	5	NA	NA	-1	301	intron_retention	FALSE	canonical	1	32891	junction_1	37819.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	20	False	AATAAA	-12
PB.9126.2	chr5	-	4380	2	incomplete-splice_match	AC026412.1	ENST00000502273.6	206	3	-73	26008	2	302	3prime_fragment	FALSE	canonical	1	108529	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	23	False	AATAAA	-13
PB.524.7	chr1	-	2647	1	novel_in_catalog	GBP2	novel	3687	15	NA	NA	-4	-13285	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-34	True	NA	NA
PB.743.2	chr1	+	3638	14	novel_in_catalog	PIP5K1A	novel	373	4	NA	NA	-27	-1	no_combination_of_known_junctions	FALSE	canonical	1	2210	junction_5	96463.48677059537	NA	15	NA	TRUE	NA	NA	NA	C	coding	499	1500	474	1973	15.0	-1910	False	AATAAA	-19
PB.524.6	chr1	-	1713	9	incomplete-splice_match	GBP2	ENST00000370466.3	2220	11	0	2185	0	2	3prime_fragment	FALSE	canonical	1	422522	junction_4	62636.37549866192	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1443	270	1712	60.0	-30	True	NA	NA
PB.6720.9	chr2	-	7757	36	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	-18	-60	combination_of_known_junctions	FALSE	canonical	1	6368	junction_12	63671.19129713794	NA	2	1	TRUE	NA	NA	NA	B	coding	1453	4362	371	4732	90.0	5	True	NA	NA
PB.11807.5	chr9	+	1823	16	novel_in_catalog	FPGS	novel	816	8	NA	NA	8	178	combination_of_known_junctions	FALSE	canonical	1	62110	junction_15	212648.2069447722	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	169	1545	10.0	1	True	NA	NA
PB.524.1	chr1	-	3115	12	incomplete-splice_match	GBP2	ENST00000464839.5	3687	15	24342	3	0	-3	5prime_fragment	FALSE	canonical	1	24189	junction_1	233027.20535051497	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	270	2045	35.0	-30	True	GATAAA	-43
PB.11807.6	chr9	+	2263	15	full-splice_match	FPGS	ENST00000373225.7	2278	15	11	4	11	-3	multi-exon	FALSE	canonical	1	101873	junction_1	211032.6095401164	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	199	1812	45.0	-46	True	ATTAAA	-14
PB.11807.1	chr9	+	2326	15	novel_in_catalog	FPGS	novel	816	8	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	1	22224	junction_4	257072.3797125361	NA	2	1	TRUE	NA	NA	NA	C	coding	306	921	955	1875	45.0	0	True	ATTAAA	-14
PB.8780.2	chr4	-	3893	6	full-splice_match	CHIC2	ENST00000263921.7	1194	6	54	-2753	54	2753	multi-exon	FALSE	canonical	1	257509	junction_5	77397.07717840513	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	337	834	35.0	1	True	ATTAAA	-26
PB.11807.3	chr9	+	2344	15	novel_in_catalog	FPGS	novel	816	8	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	1	39759	junction_8	223076.41305854442	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	973	1893	45.0	1	True	ATTAAA	-14
PB.8009.3	chr3	-	4104	1	full-splice_match	EPM2AIP1	ENST00000322716.7	8126	1	58	3964	58	1304	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	607	1824	34	1857	95.0	5	True	NA	NA
PB.9759.1	chr6	+	1485	9	full-splice_match	GMPR	ENST00000259727.4	1515	9	28	2	28	-2	multi-exon	FALSE	canonical	1	174235	junction_1	71770.47527012762	NA	0	NA	TRUE	NA	NA	NA	A	coding	345	1038	87	1124	20.0	21	True	AATATA	-21
PB.619.8	chr1	+	3255	20	full-splice_match	MOV10	ENST00000357443.2	3383	20	153	-25	153	1	multi-exon	FALSE	canonical	1	256288	junction_1	83119.69904458965	NA	0	NA	TRUE	NA	NA	NA	C	coding	1003	3012	16	3027	35.0	3	True	AAGAAA	-29
PB.619.9	chr1	+	3106	19	incomplete-splice_match	MOV10	ENST00000357443.2	3383	20	14187	-25	-4973	1	5prime_fragment	FALSE	canonical	1	302126	junction_5	73919.41832694037	NA	2	NA	TRUE	NA	NA	NA	C	coding	947	2844	35	2878	35.0	-4756	False	AAGAAA	-29
PB.8892.5	chr4	-	2716	8	full-splice_match	TRMT10A	ENST00000394876.6	1638	8	-7	-1071	-7	-815	multi-exon	FALSE	canonical	1	25119	junction_7	27792.830019445588	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	151	1170	30.0	-1	True	AGTAAA	-17
PB.4610.2	chr16	+	3035	4	novel_in_catalog	TRAPPC2L	novel	1060	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	731135	junction_3	307575.87103130616	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	992	1318	20.0	-5	True	NA	NA
PB.619.3	chr1	+	4522	19	novel_in_catalog	MOV10	novel	347	2	NA	NA	-39	0	intron_retention	TRUE	canonical	1	38941	junction_1	123893.71102683138	NA	2	1	TRUE	NA	NA	NA	C	coding	900	2703	153	2855	35.0	0	True	AAGAAA	-28
PB.4610.1	chr16	+	2175	5	full-splice_match	TRAPPC2L	ENST00000301021.7	2215	5	36	4	-5	-4	multi-exon	FALSE	canonical	1	393994	junction_4	390705.1234198241	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	30	452	5.0	-7	True	NA	NA
PB.619.6	chr1	+	5000	21	full-splice_match	MOV10	ENST00000369645.5	3552	21	195	-1643	-16	1636	multi-exon	FALSE	canonical	1	107951	junction_1	107602.42295208784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1003	3012	114	3125	30.0	-274	False	AATAAA	-22
PB.10783.4	chr7	-	5005	27	novel_in_catalog	NRCAM	novel	2835	3	NA	NA	-39	-808	intron_retention	FALSE	canonical	1	71871	junction_26	65763.4457488717	NA	4	1	TRUE	NA	NA	NA	C	coding	1159	3480	541	4020	65.0	-52	True	AAAAAG	-45
PB.619.4	chr1	+	3377	21	novel_not_in_catalog	MOV10	novel	347	2	NA	NA	-37	6	any annotated donor/acceptor	FALSE	canonical	1	8895	junction_20	139736.09391187195	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2982	151	3132	5.0	2	True	AAAACA	-34
PB.619.5	chr1	+	3596	20	novel_in_catalog	MOV10	novel	347	2	NA	NA	-24	0	intron_retention	FALSE	canonical	1	107951	junction_1	110244.17995821493	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	122	2824	35.0	1	True	AAGAAA	-28
PB.2871.5	chr12	-	3082	12	full-splice_match	PRDM4	ENST00000228437.9	4210	12	-27	1155	-27	170	multi-exon	FALSE	canonical	1	96720	junction_11	42980.20951842759	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	500	2893	30.0	-29	False	AATGAA	-22
PB.2871.4	chr12	-	4123	12	novel_in_catalog	PRDM4	novel	4210	12	NA	NA	14	-11	combination_of_known_junctions	FALSE	canonical	1	4852	junction_11	64620.79383527276	NA	3	NA	TRUE	NA	NA	NA	C	coding	797	2394	397	2790	35.0	-100	False	ATTAAA	-14
PB.6320.6	chr2	+	4072	4	novel_in_catalog	TRIB2	novel	4391	3	NA	NA	25	-7	combination_of_known_junctions	FALSE	canonical	1	20628	junction_1	134677.51674854846	NA	15	NA	TRUE	NA	NA	NA	C	coding	343	1032	1108	2139	30.0	18	True	AATAAA	-15
PB.2871.6	chr12	-	2875	12	full-splice_match	PRDM4	ENST00000228437.9	4210	12	-15	1350	-15	-25	multi-exon	FALSE	canonical	1	96720	junction_11	42980.20951842759	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2388	488	2875	75.0	-17	False	NA	NA
PB.2871.1	chr12	-	4210	12	novel_in_catalog	PRDM4	novel	4210	12	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	1	9474	junction_6	68311.75872134538	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	453	2867	15.0	-4	True	ATTAAA	-24
PB.6320.1	chr2	+	3867	5	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	40	-4	any annotated donor/acceptor	FALSE	canonical	1	20628	junction_1	141049.07741722383	NA	3	NA	TRUE	NA	NA	NA	C	coding	207	624	1308	1931	40.0	33	True	AATAAA	-18
PB.2871.3	chr12	-	4182	12	full-splice_match	PRDM4	ENST00000228437.9	4210	12	24	4	24	-4	multi-exon	FALSE	canonical	1	96720	junction_11	42980.20951842759	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	449	2842	15.0	0	True	ATTAAA	-21
PB.2871.2	chr12	-	4091	11	novel_in_catalog	PRDM4	novel	4210	12	NA	NA	32	-1	no_combination_of_known_junctions	FALSE	canonical	1	2843	junction_4	71732.46035380357	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	441	1862	15.0	8	True	ATTAAA	-24
PB.743.5	chr1	+	3867	15	novel_in_catalog	PIP5K1A	novel	373	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	5532	junction_1	94704.84375844366	NA	9	NA	TRUE	NA	NA	NA	C	coding	542	1629	575	2203	15.0	1	True	AATAAA	-18
PB.6320.8	chr2	+	3699	6	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	52	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	142301.9946494075	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	1140	1763	40.0	-1299	False	AATAAA	-18
PB.6320.9	chr2	+	1971	3	full-splice_match	TRIB2	ENST00000155926.8	4391	3	958	1462	-391	-1462	multi-exon	FALSE	canonical	1	290981	junction_2	14270.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	343	1032	462	1493	55.0	0	True	TTTAAA	-40
PB.1140.20	chr1	+	5031	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	19	-2315	19	126	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	2	NA	TRUE	NA	NA	NA	C	coding	785	2358	155	2512	75.0	-7	True	TATAAA	-37
PB.9119.2	chr5	+	2669	14	novel_not_in_catalog	CEP72	novel	2434	12	NA	NA	69	-4	any annotated donor/acceptor	FALSE	canonical	1	23	junction_1	43013.763833776844	NA	2	NA	TRUE	NA	NA	NA	C	coding	597	1794	480	2273	35.0	1	True	AATAAA	-17
PB.457.8	chr1	+	2789	4	full-splice_match	LEPROT	ENST00000371065.8	4622	4	113	1720	-8	-1720	multi-exon	FALSE	canonical	1	273706	junction_1	148782.98820093647	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	26	421	25.0	-1	True	NA	NA
PB.457.9	chr1	+	2307	4	full-splice_match	LEPROT	ENST00000371065.8	4622	4	124	2191	1	1752	multi-exon	FALSE	canonical	1	273706	junction_1	148782.98820093647	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	15	410	25.0	10	True	NA	NA
PB.457.6	chr1	+	1452	4	full-splice_match	LEPROT	ENST00000371065.8	4622	4	104	3066	-17	877	multi-exon	FALSE	canonical	1	273706	junction_1	148782.98820093647	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	35	430	80.0	-10	True	NA	NA
PB.457.7	chr1	+	2120	3	full-splice_match	LEPROT	ENST00000475108.5	492	3	109	-1737	-12	1737	multi-exon	FALSE	canonical	1	23797	junction_2	124954.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-5	True	NA	NA
PB.457.4	chr1	+	5113	20	full-splice_match	LEPR	ENST00000371060.7	5135	20	21	1	21	-1	multi-exon	FALSE	canonical	1	29053	junction_2	48453.729760300295	NA	0	NA	TRUE	NA	NA	NA	A	coding	896	2691	165	2855	10.0	-28	True	TATAAA	-14
PB.457.5	chr1	+	2675	1	novel_in_catalog	LEPROT	novel	492	3	NA	NA	-18	-4645	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	118	357	1	357	80.0	-11	True	NA	NA
PB.457.2	chr1	+	5391	22	novel_not_in_catalog	LEPROT	novel	492	3	NA	NA	31	199423	any annotated donor/acceptor	FALSE	canonical	1	981	junction_3	63636.02938106489	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	440	3130	5.0	-1883	False	TATAAA	-17
PB.8289.1	chr3	+	5589	18	full-splice_match	PHLDB2	ENST00000393925.7	5543	18	-39	-7	-3	7	multi-exon	FALSE	canonical	1	53147	junction_1	57095.629882701374	NA	4	NA	TRUE	NA	NA	NA	C	coding	1253	3762	137	3898	45.0	5	True	ATTAAA	-19
PB.8289.2	chr3	+	1953	4	incomplete-splice_match	PHLDB2	ENST00000393925.7	5543	18	-40	57079	-4	1505	3prime_fragment	FALSE	canonical	1	53147	junction_1	72372.24610304699	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1815	138	1952	70.0	4	True	AAGAAA	-40
PB.8289.3	chr3	+	5438	17	novel_in_catalog	PHLDB2	novel	5673	18	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	1	53147	junction_1	61000.17277588236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1210	3633	81	3713	25.0	-31	True	AATAAA	-22
PB.3960.9	chr15	-	2525	11	novel_in_catalog	PKM	novel	3016	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	57286	junction_10	4984729.7872269675	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	204	1904	0.0	-1	True	AATAAA	-17
PB.3960.8	chr15	-	2813	10	novel_in_catalog	PKM	novel	3016	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	3879579	junction_2	4361285.0824927	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	1041	2192	0.0	-22	True	AATAAA	-17
PB.4913.21	chr17	+	3407	21	novel_in_catalog	AP2B1	novel	552	5	NA	NA	-25	4	combination_of_known_junctions	FALSE	canonical	1	29255	junction_14	263439.91108206724	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	198	3011	20.0	25	True	ATTAAA	-29
PB.4913.20	chr17	+	5753	21	novel_in_catalog	AP2B1	novel	552	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	29255	junction_14	263439.91108206724	NA	4	NA	TRUE	NA	NA	NA	C	coding	937	2814	230	3043	35.0	-7	True	AATAAA	-14
PB.4913.22	chr17	+	5726	22	full-splice_match	AP2B1	ENST00000618940.4	3415	22	13	-2324	-3	1	multi-exon	FALSE	canonical	1	49286	junction_1	245553.37095907496	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	160	3015	30.0	0	True	AATAAA	-15
PB.8987.1	chr4	-	3310	12	full-splice_match	SLC7A11	ENST00000280612.9	9645	12	98	6237	98	1510	multi-exon	TRUE	canonical	1	174406	junction_1	56439.92283557757	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	183	1688	70.0	0	True	NA	NA
PB.3960.3	chr15	-	2326	11	full-splice_match	PKM	ENST00000335181.9	2318	11	-5	-3	-5	0	multi-exon	FALSE	canonical	1	3879579	junction_2	4158446.281679377	NA	21	1	TRUE	NA	NA	NA	C	coding	531	1596	110	1705	0.0	-22	True	AATAAA	-17
PB.3960.2	chr15	-	2507	12	novel_in_catalog	PKM	novel	3016	3	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	1	5736	junction_3	5357110.215389693	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	123	1574	0.0	6326	False	AATAAA	-18
PB.3960.5	chr15	-	4693	10	novel_in_catalog	PKM	novel	3016	3	NA	NA	-6	0	intron_retention	FALSE	canonical	1	1700639	junction_2	4728385.940342316	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	111	1421	0.0	-23	True	AATAAA	-17
PB.3960.7	chr15	-	2894	11	novel_in_catalog	PKM	novel	3016	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1700639	junction_3	4850123.638321733	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	110	1420	0.0	-22	True	AATAAA	-17
PB.3960.6	chr15	-	4124	10	novel_in_catalog	PKM	novel	3016	3	NA	NA	-5	0	intron_retention	FALSE	canonical	1	5826429	junction_1	3806689.3773622885	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	110	1420	0.0	-22	True	AATAAA	-17
PB.6921.40	chr2	-	2082	4	full-splice_match	SF3B1	ENST00000487698.5	2127	4	51	-6	-1	6	multi-exon	FALSE	canonical	1	1879832	junction_3	218889.50084155856	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	30	494	30.0	-1	True	ATTAAA	-21
PB.6921.41	chr2	-	3528	1	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-1	-11320	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.6921.42	chr2	-	2781	2	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	-5	-11320	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	6	True	NA	NA
PB.10520.2	chr7	-	1522	10	novel_not_in_catalog	POLD2	novel	1619	11	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	6700	junction_5	545195.1123771659	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	847	1425	15.0	-4	True	AATAAA	-22
PB.10520.3	chr7	-	2395	8	novel_in_catalog	POLD2	novel	1619	11	NA	NA	11	0	intron_retention	FALSE	canonical	1	568487	junction_7	448212.0154920309	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	1720	2298	15.0	-1	True	AATAAA	-22
PB.10520.1	chr7	-	1782	11	full-splice_match	POLD2	ENST00000452185.5	1659	11	-19	-104	10	0	multi-exon	FALSE	canonical	1	96516	junction_10	476479.5719505822	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	269	1678	15.0	-2	True	AATAAA	-29
PB.10520.6	chr7	-	4846	1	novel_in_catalog	POLD2	novel	1619	11	NA	NA	-9	-908	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	122	369	1	369	90.0	1	True	NA	NA
PB.10520.7	chr7	-	3449	2	incomplete-splice_match	POLD2	ENST00000496539.1	571	3	-17	908	9	-908	3prime_fragment	FALSE	canonical	1	568487	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	75	228	97	324	90.0	-3	True	NA	NA
PB.10520.4	chr7	-	2319	9	novel_in_catalog	POLD2	novel	1619	11	NA	NA	11	0	intron_retention	FALSE	canonical	1	568487	junction_8	322106.8802901453	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	95	1567	15.0	-1	True	AATAAA	-22
PB.10520.5	chr7	-	1599	11	full-splice_match	POLD2	ENST00000610533.4	1619	11	13	7	-9	0	multi-exon	FALSE	canonical	1	568487	junction_10	382981.87688056467	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	93	1502	15.0	1	True	AATAAA	-22
PB.11787.8	chr9	-	3387	6	full-splice_match	PPP6C	ENST00000415905.5	4172	6	130	655	9	-655	multi-exon	FALSE	canonical	1	38101	junction_4	394876.8125968401	NA	3	NA	TRUE	NA	NA	NA	C	coding	283	852	92	943	25.0	105	False	AATAAA	-21
PB.1140.22	chr1	+	3042	23	novel_not_in_catalog	MIA3	novel	8142	28	NA	NA	27	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	183256.6059442288	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	147	2516	15.0	1	True	CATAAA	-18
PB.333.12	chr1	+	2427	19	novel_in_catalog	CTPS1	novel	3201	19	NA	NA	-54	-1	combination_of_known_junctions	FALSE	canonical	1	17668	junction_1	194017.0506103367	NA	5	1	TRUE	NA	NA	NA	C	coding	591	1776	522	2297	25.0	1	True	TTTAAA	-39
PB.333.11	chr1	+	2322	18	novel_in_catalog	CTPS1	novel	3201	19	NA	NA	-75	660	combination_of_known_junctions	FALSE	canonical	1	17668	junction_1	194753.59119610232	NA	2	NA	TRUE	NA	NA	NA	C	coding	591	1776	543	2318	25.0	3	True	AATAAA	-15
PB.333.10	chr1	+	3241	19	novel_in_catalog	CTPS1	novel	3201	19	NA	NA	-82	1	combination_of_known_junctions	FALSE	canonical	1	17668	junction_1	194017.0506103367	NA	3	NA	TRUE	NA	NA	NA	C	coding	591	1776	550	2325	15.0	-4	True	NA	NA
PB.9263.6	chr5	+	3983	16	full-splice_match	SLC30A5	ENST00000396591.7	4360	16	381	-4	36	4	multi-exon	FALSE	canonical	1	156490	junction_1	98606.98020809684	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	230	2527	25.0	-32	True	ATTAAA	-25
PB.1649.1	chr10	+	1418	1	intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	6889	False	NA	NA
PB.9263.4	chr5	+	2767	16	full-splice_match	SLC30A5	ENST00000396591.7	4360	16	317	1276	14	-333	multi-exon	FALSE	canonical	1	156490	junction_1	98606.98020809684	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	294	2591	45.0	-2	True	AATACA	-19
PB.9263.3	chr5	+	2840	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	35	-74	intron_retention	FALSE	canonical	1	29076	junction_1	118282.45771241735	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	231	2405	35.0	-33	True	AATAAA	-17
PB.9263.2	chr5	+	2544	16	full-splice_match	SLC30A5	ENST00000396591.7	4360	16	411	1405	-32	-462	multi-exon	FALSE	canonical	1	156490	junction_1	98606.98020809684	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	200	2497	30.0	-2	True	AATAAA	-17
PB.9263.1	chr5	+	3814	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	-24	0	intron_retention	FALSE	canonical	1	29076	junction_1	118282.45771241735	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	192	2366	45.0	6	True	ATTAAA	-17
PB.11752.21	chr9	-	1548	13	incomplete-splice_match	CDK5RAP2	ENST00000360822.7	5551	35	-2	102566	-2	27165	3prime_fragment	FALSE	canonical	1	139808	junction_12	40213.28694209788	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1350	198	1547	60.0	-14	True	AATGAA	-29
PB.2072.1	chr11	+	1017	1	full-splice_match	CCDC85B	ENST00000312579.3	1524	1	506	1	506	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	202	609	167	775	15.0	-5	True	AATAAA	-16
PB.9263.9	chr5	+	3103	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	26	186	intron_retention	FALSE	canonical	1	29077	junction_14	109884.2934421736	NA	1	NA	TRUE	NA	NA	NA	C	coding	722	2169	240	2408	20.0	-42	True	AATGAA	-33
PB.9263.8	chr5	+	3133	16	full-splice_match	SLC30A5	ENST00000396591.7	4360	16	421	806	-22	137	multi-exon	FALSE	canonical	1	156490	junction_1	98606.98020809684	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	190	2487	50.0	8	True	AATAAA	-17
PB.7426.6	chr20	+	5584	5	incomplete-splice_match	DNAJC5	ENST00000470551.1	5287	6	-43	28	-43	-28	intron_retention	FALSE	canonical	1	24191	junction_1	158238.17555409155	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	197	700	40.0	-9	True	AATAAA	-13
PB.10718.3	chr7	-	2520	16	novel_in_catalog	TAF6	novel	2685	15	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	1220	junction_14	227622.9700251029	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	165	2345	15.0	-3	True	AATAAA	-21
PB.7882.1	chr22	-	2935	18	novel_in_catalog	HDAC10	novel	2375	18	NA	NA	-4	0	intron_retention	FALSE	canonical	1	89341	junction_17	81352.36759335885	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	1550	2614	15.0	-20	True	AGTAAA	-14
PB.7882.2	chr22	-	2593	20	full-splice_match	HDAC10	ENST00000216271.9	2687	20	91	3	-33	0	multi-exon	FALSE	canonical	1	89341	junction_19	81060.1654556031	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	263	2272	15.0	10015	False	AGTAAA	-14
PB.7882.3	chr22	-	2433	20	novel_in_catalog	HDAC10	novel	2375	18	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	1	48267	junction_19	85773.05342365823	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	799	2112	15.0	-17	True	AGTAAA	-14
PB.7882.4	chr22	-	2339	19	novel_in_catalog	HDAC10	novel	2375	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	48267	junction_18	90795.64412880957	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	705	2018	15.0	-20	True	AGTAAA	-14
PB.7882.5	chr22	-	2540	20	novel_not_in_catalog	HDAC10	novel	2375	18	NA	NA	-21	-5	any annotated donor/acceptor	FALSE	canonical	1	11652	junction_10	97188.41587515114	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	251	2224	30.0	10027	False	AGTAAA	-9
PB.10347.3	chr6	+	4156	6	incomplete-splice_match	TBP	ENST00000392092.6	1903	8	38	20	-8	-4	intron_retention	FALSE	canonical	1	150202	junction_1	55195.351473108676	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	242	1090	30.0	-1	True	AATAAA	-11
PB.10347.2	chr6	+	1867	8	full-splice_match	TBP	ENST00000392092.6	1903	8	36	0	-10	0	multi-exon	FALSE	canonical	1	150202	junction_1	48962.04200840334	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	244	1263	30.0	-3	True	AATAAA	-31
PB.2149.1	chr11	-	5386	20	full-splice_match	FCHSD2	ENST00000409418.8	3154	20	-29	-2203	-29	704	multi-exon	FALSE	canonical	1	203595	junction_19	37758.53312183175	NA	20	1	TRUE	NA	NA	NA	C	coding	740	2223	414	2636	15.0	-12	True	CATAAA	-17
PB.229.1	chr1	-	2721	7	novel_not_in_catalog	TAF12	novel	844	5	NA	NA	-16	1512	any annotated donor/acceptor	FALSE	canonical	1	657	junction_1	233232.57287570753	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	195	782	95.0	2	True	NA	NA
PB.2149.3	chr11	-	4364	20	full-splice_match	FCHSD2	ENST00000409418.8	3154	20	267	-1477	52	-21	multi-exon	FALSE	canonical	1	203595	junction_19	37758.53312183175	NA	1	NA	TRUE	NA	NA	NA	C	coding	740	2223	118	2340	70.0	515	False	TATAAA	-7
PB.10044.9	chr6	+	4773	13	novel_in_catalog	ZNF451	novel	581	6	NA	NA	-10	-2	no_combination_of_known_junctions	FALSE	canonical	1	4266	junction_3	62592.04879010636	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	377	3043	25.0	-33	True	ATTAAA	-15
PB.2149.4	chr11	-	4265	20	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	85	-21	combination_of_known_junctions	FALSE	canonical	1	8979	junction_19	71238.48530727858	NA	4	NA	TRUE	NA	NA	NA	C	coding	719	2160	82	2241	70.0	1250	False	TATAAA	-7
PB.1303.2	chr10	+	1726	10	full-splice_match	PRPF18	ENST00000378572.7	1717	10	20	-29	8	29	multi-exon	FALSE	canonical	1	238558	junction_8	48642.993976395555	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	141	1169	20.0	-18	True	NA	NA
PB.2149.6	chr11	-	4805	19	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	-136	-11	intron_retention	FALSE	canonical	1	8979	junction_18	72087.25977396517	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	303	1955	35.0	-1	True	AATAAA	-2
PB.2149.9	chr11	-	4581	19	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	-46	-21	no_combination_of_known_junctions	FALSE	canonical	1	4746	junction_10	75836.1980727924	NA	3	NA	TRUE	NA	NA	NA	C	coding	708	2127	431	2557	70.0	202	False	TATAAA	-7
PB.10044.4	chr6	+	4285	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	129	854	0	620	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	1	NA	TRUE	NA	NA	NA	C	coding	1061	3186	116	3301	35.0	-53	True	AATAAA	-24
PB.10044.7	chr6	+	3370	11	full-splice_match	ZNF451	ENST00000444273.6	3402	11	32	0	6	0	multi-exon	FALSE	canonical	1	105223	junction_1	35226.50227939186	NA	4	1	TRUE	NA	NA	NA	C	coding	932	2799	110	2908	100.0	-47	True	NA	NA
PB.10044.6	chr6	+	5432	4	full-splice_match	ZNF451	ENST00000370710.10	375	4	-64	-4993	4	3650	multi-exon	FALSE	canonical	1	25154	junction_3	85741.90978486282	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	1435	2925	90.0	-49	True	TTTAAA	-9
PB.10044.1	chr6	+	5058	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	205	5	4	-5	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	2	NA	TRUE	NA	NA	NA	C	coding	1061	3186	40	3225	30.0	23	False	AGTAAA	-17
PB.7903.5	chr3	-	1675	11	full-splice_match	CRBN	ENST00000231948.8	2206	11	9	522	0	327	multi-exon	FALSE	canonical	1	252690	junction_5	82692.23860925522	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	15	1343	80.0	-11	True	NA	NA
PB.2846.1	chr12	-	4789	2	full-splice_match	TTC41P	ENST00000388789.4	1372	2	40	-3457	40	2522	multi-exon	FALSE	canonical	1	2795	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	139	420	427	846	45.0	2214	False	ATTAAA	-17
PB.10044.2	chr6	+	4875	13	novel_in_catalog	ZNF451	novel	581	6	NA	NA	-10	-6	no_combination_of_known_junctions	FALSE	canonical	1	4266	junction_3	62592.04879010636	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	377	3043	30.0	-33	True	AGTAAA	-16
PB.2048.1	chr11	+	2480	18	full-splice_match	POLA2	ENST00000265465.7	3744	18	202	1062	32	7	multi-exon	FALSE	canonical	1	213711	junction_1	68654.33689907654	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	330	2126	15.0	2	True	ATTAAA	-19
PB.3331.4	chr14	+	4508	1	novel_in_catalog	ZFHX2-AS1	novel	2322	3	NA	NA	42922	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	214	645	488	1132	100.0	0	True	NA	NA
PB.2048.3	chr11	+	2627	18	novel_in_catalog	POLA2	novel	3744	18	NA	NA	2	392	combination_of_known_junctions	FALSE	canonical	1	7039	junction_17	105144.08017010092	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	372	2147	50.0	5	True	NA	NA
PB.2048.2	chr11	+	3038	17	incomplete-splice_match	POLA2	ENST00000265465.7	3744	18	98	1737	-60	450	3prime_fragment	FALSE	canonical	1	213711	junction_1	70011.15498124991	NA	2	NA	TRUE	NA	NA	NA	C	coding	569	1710	434	2143	95.0	-102	False	NA	NA
PB.2048.5	chr11	+	3568	18	full-splice_match	POLA2	ENST00000265465.7	3744	18	168	8	-2	-8	multi-exon	FALSE	canonical	1	213711	junction_1	68654.33689907654	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	364	2160	40.0	-12	True	AGTAAA	-13
PB.2048.4	chr11	+	2449	18	novel_in_catalog	POLA2	novel	3744	18	NA	NA	5	7	combination_of_known_junctions	FALSE	canonical	1	14605	junction_16	99745.59325021517	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	369	1931	15.0	-17	True	ATTAAA	-19
PB.3331.3	chr14	+	2728	3	full-splice_match	THTPA	ENST00000404535.3	1779	3	256	-1205	-8	508	multi-exon	FALSE	canonical	1	45387	junction_1	49568.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	97	789	100.0	-8	True	NA	NA
PB.2048.6	chr11	+	3001	18	novel_not_in_catalog	POLA2	novel	3744	18	NA	NA	13	-8	any annotated donor/acceptor	FALSE	canonical	1	8429	junction_17	104894.6307036578	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	349	2037	40.0	3	True	AGTAAA	-13
PB.4297.1	chr16	-	1243	8	incomplete-splice_match	CRYM	ENST00000543948.5	1400	9	670	4	-15	-1	5prime_fragment	FALSE	canonical	1	152760	junction_6	75700.23392841217	NA	0	NA	TRUE	NA	NA	NA	B	coding	314	945	40	984	15.0	-1	True	AATAAA	-18
PB.11815.4	chr9	-	1772	7	novel_in_catalog	PTGES2	novel	2331	7	NA	NA	-13	0	intron_retention	FALSE	canonical	1	16433	junction_2	345618.8226276971	NA	1	1	TRUE	NA	NA	NA	C	coding	310	933	21	953	10.0	-12	True	AATAAA	-41
PB.11815.1	chr9	-	1689	8	novel_in_catalog	PTGES2	novel	2331	7	NA	NA	-4	0	intron_retention	FALSE	canonical	1	50446	junction_6	401469.6993410332	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	678	1238	10.0	-3	True	AATAAA	-41
PB.11815.2	chr9	-	2054	6	novel_in_catalog	PTGES2	novel	2331	7	NA	NA	-8	0	intron_retention	FALSE	canonical	1	461166	junction_5	198461.97887514878	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	16	966	10.0	-7	True	AATAAA	-41
PB.11815.3	chr9	-	2319	7	full-splice_match	PTGES2	ENST00000338961.10	2331	7	10	2	10	-1	multi-exon	FALSE	canonical	1	461166	junction_6	194081.5072423754	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	736	1869	10.0	-13	False	AATAAA	-40
PB.5813.1	chr19	-	1325	2	incomplete-splice_match	NR2F6	ENST00000291442.3	2404	4	9858	3	8422	-3	5prime_fragment	FALSE	canonical	1	568214	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	135	408	452	859	15.0	-42	True	AATAAA	-17
PB.635.41	chr1	-	3126	18	full-splice_match	CSDE1	ENST00000261443.9	3228	18	-20	122	-7	-105	multi-exon	FALSE	canonical	1	94441	junction_17	1585338.5915023573	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	71	2374	80.0	-12	True	TTTAAA	-8
PB.5205.3	chr17	+	2951	8	full-splice_match	AMZ2	ENST00000580753.5	1339	8	8	-1620	0	1595	multi-exon	FALSE	canonical	1	8089	junction_1	322729.08553630864	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	79	1161	40.0	-32	True	AATAAA	-22
PB.9273.2	chr5	+	2118	16	full-splice_match	GTF2H2C	ENST00000510979.5	2952	16	-33	867	0	40	multi-exon	FALSE	canonical	1	588	junction_1	66427.95730112435	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	229	1416	75.0	NA	False	NA	NA
PB.9273.3	chr5	+	1799	16	novel_in_catalog	GTF2H2C	novel	832	8	NA	NA	0	-118	combination_of_known_junctions	FALSE	canonical	1	1693	junction_14	66201.86751229572	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	68	1255	70.0	NA	False	NA	NA
PB.1655.8	chr10	+	2517	21	full-splice_match	ACSL5	ENST00000356116.5	3353	21	14	822	13	-819	multi-exon	FALSE	canonical	1	172502	junction_1	65370.14897128122	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	99	2318	30.0	-19	True	AATAAA	-21
PB.1655.9	chr10	+	3187	20	novel_in_catalog	ACSL5	novel	3351	21	NA	NA	25	-2	no_combination_of_known_junctions	FALSE	canonical	1	3739	junction_12	96024.14268957937	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	87	2171	10.0	-7	True	AATAAA	-11
PB.9273.6	chr5	+	1769	17	full-splice_match	GTF2H2C	ENST00000380729.7	1803	17	-22	56	0	-56	multi-exon	FALSE	canonical	1	1693	junction_15	64624.08864272164	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	311	1498	45.0	NA	False	TATAAA	-6
PB.7164.32	chr20	-	3083	20	full-splice_match	GPCPD1	ENST00000379019.5	5489	20	11	2395	11	542	multi-exon	FALSE	canonical	1	30025	junction_16	111115.82725336408	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	203	2221	50.0	-20	True	NA	NA
PB.1655.4	chr10	+	4125	19	incomplete-splice_match	ACSL5	ENST00000356116.5	3353	21	10	4	9	-1	intron_retention	FALSE	canonical	1	172502	junction_1	58445.69967219864	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	103	2124	10.0	-23	True	AATAAA	-12
PB.1655.5	chr10	+	2712	21	full-splice_match	ACSL5	ENST00000356116.5	3353	21	7	634	6	-631	multi-exon	FALSE	canonical	1	172502	junction_1	65370.14897128122	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	106	2325	25.0	-26	True	GATAAA	-15
PB.1655.6	chr10	+	3339	21	full-splice_match	ACSL5	ENST00000356116.5	3353	21	13	1	12	-1	multi-exon	FALSE	canonical	1	172502	junction_1	65370.14897128122	NA	4	NA	TRUE	NA	NA	NA	C	coding	739	2220	100	2319	5.0	-20	True	AATAAA	-15
PB.1655.7	chr10	+	2395	21	full-splice_match	ACSL5	ENST00000356116.5	3353	21	13	945	12	826	multi-exon	FALSE	canonical	1	172502	junction_1	65370.14897128122	NA	1	NA	TRUE	NA	NA	NA	C	coding	739	2220	100	2319	5.0	-20	True	ATTAAA	-17
PB.5679.6	chr19	-	3605	10	novel_not_in_catalog	ZNF558	novel	7032	10	NA	NA	-5	-7	any annotated donor/acceptor	FALSE	canonical	1	2016	junction_6	43871.64570273911	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	829	2037	35.0	-6	True	AATAAA	-16
PB.1655.1	chr10	+	3411	21	full-splice_match	ACSL5	ENST00000393081.5	3380	21	-32	1	-2	-1	multi-exon	FALSE	canonical	1	14659	junction_1	87681.11414267043	NA	2	NA	TRUE	NA	NA	NA	C	coding	683	2052	340	2391	5.0	18	True	AATAAA	-15
PB.1655.2	chr10	+	2462	21	full-splice_match	ACSL5	ENST00000393081.5	3380	21	-27	945	3	826	multi-exon	FALSE	canonical	1	14659	junction_1	87681.11414267043	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	335	2386	5.0	23	True	ATTAAA	-17
PB.1655.3	chr10	+	2568	21	full-splice_match	ACSL5	ENST00000393081.5	3380	21	-13	825	-13	-822	multi-exon	FALSE	canonical	1	14659	junction_1	87681.11414267043	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	321	2372	25.0	-16	True	AATAAA	-18
PB.9394.1	chr5	-	7683	17	novel_in_catalog	MCC	novel	8257	17	NA	NA	33	-1	combination_of_known_junctions	FALSE	canonical	1	5197	junction_16	22653.371913659867	NA	8	NA	TRUE	NA	NA	NA	C	coding	766	2301	181	2481	30.0	1	True	AATAAA	-21
PB.8088.1	chr3	-	1577	4	full-splice_match	CCDC51	ENST00000395694.6	1560	4	-25	8	-9	-8	multi-exon	TRUE	canonical	1	63626	junction_3	78674.33661620542	NA	0	NA	TRUE	NA	NA	NA	A	coding	411	1236	112	1347	45.0	-22	True	ATTAAA	-21
PB.9394.5	chr5	-	8286	17	full-splice_match	MCC	ENST00000302475.8	8257	17	-37	8	-37	-8	multi-exon	FALSE	canonical	1	50900	junction_6	14645.839861010874	NA	10	NA	TRUE	NA	NA	NA	C	coding	829	2490	602	3091	25.0	-49	True	AATAAA	-14
PB.9394.6	chr5	-	7964	17	full-splice_match	MCC	ENST00000302475.8	8257	17	19	274	8	-274	multi-exon	FALSE	canonical	1	50900	junction_6	14645.839861010874	NA	9	NA	TRUE	NA	NA	NA	C	coding	829	2490	546	3035	15.0	7	True	ATTAAA	-18
PB.9394.7	chr5	-	4964	17	novel_in_catalog	MCC	novel	8257	17	NA	NA	-22	1275	combination_of_known_junctions	FALSE	canonical	1	6577	junction_16	22382.154648622276	NA	7	NA	TRUE	NA	NA	NA	C	coding	766	2301	219	2519	5.0	7	True	AATAAA	-16
PB.9394.8	chr5	-	5128	17	full-splice_match	MCC	ENST00000302475.8	8257	17	-29	3158	-29	875	multi-exon	FALSE	canonical	1	50900	junction_6	14645.839861010874	NA	3	NA	TRUE	NA	NA	NA	C	coding	829	2490	594	3083	70.0	-41	True	AAAACA	-9
PB.9689.27	chr6	+	3120	1	incomplete-splice_match	IRF4	ENST00000380956.8	5331	9	16584	5	15044	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-710	False	AATAAA	-19
PB.9689.24	chr6	+	4645	5	incomplete-splice_match	IRF4	ENST00000380956.8	5331	9	5432	5	3892	-5	5prime_fragment	FALSE	canonical	1	376971	junction_3	24690.362627703547	NA	4	NA	TRUE	NA	NA	NA	C	coding	256	771	31	801	15.0	-7857	False	AATAAA	-19
PB.9689.23	chr6	+	4793	6	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	3155	-11	any annotated donor/acceptor	FALSE	canonical	1	798	junction_1	163917.32565461163	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	110	955	15.0	-8594	False	AATAAA	-13
PB.9689.20	chr6	+	5059	8	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	900	-1	any annotated donor/acceptor	FALSE	canonical	1	492	junction_1	142998.78644911072	NA	4	NA	TRUE	NA	NA	NA	C	coding	306	921	291	1211	20.0	-7441	False	AATAAA	-23
PB.934.1	chr1	+	2848	20	novel_in_catalog	DNM3	novel	2322	15	NA	NA	0	-5	combination_of_known_junctions	TRUE	canonical	1	9309	junction_19	21205.171032444785	NA	0	NA	TRUE	NA	NA	NA	A	coding	848	2547	158	2704	35.0	2	True	AATAAA	-20
PB.7164.35	chr20	-	2342	5	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	19	-15684	any annotated donor/acceptor	FALSE	canonical	1	5276	junction_3	100772.10475963823	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-12	True	AATACA	-16
PB.11768.5	chr9	+	2640	2	incomplete-splice_match	MRRF	ENST00000373728.6	1349	6	-38	18358	-11	-11847	3prime_fragment	FALSE	canonical	1	80395	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-18	True	NA	NA
PB.7164.34	chr20	-	2290	20	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	6	956	any annotated donor/acceptor	FALSE	canonical	1	1199	junction_19	106049.48626833793	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	372	2237	30.0	-25	True	NA	NA
PB.11050.27	chr8	+	2028	2	incomplete-splice_match	PTK2B	ENST00000412793.5	818	7	9	30946	6	1653	3prime_fragment	FALSE	canonical	1	53763	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	NA	NA
PB.7047.15	chr2	+	3744	7	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	-10	628	no_combination_of_known_junctions	FALSE	canonical	1	7259	junction_1	70445.31475253221	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	1790	2737	25.0	18	True	AATAAA	-15
PB.11809.3	chr9	-	3274	12	novel_in_catalog	AK1	novel	2266	7	NA	NA	-21860	0	intron_retention	FALSE	canonical	1	76359	junction_6	379795.6540736606	NA	2	NA	TRUE	NA	NA	NA	B	coding	299	900	178	1077	10.0	-1	True	ACTAAA	-15
PB.11809.2	chr9	-	3335	13	novel_in_catalog	AK1	novel	2266	7	NA	NA	-21865	1	intron_retention	FALSE	canonical	1	76359	junction_6	393955.9130681429	NA	0	NA	TRUE	NA	NA	NA	B	coding	333	1002	136	1137	10.0	-6	True	ACTAAA	-16
PB.11809.1	chr9	-	4140	13	novel_in_catalog	AK1	novel	2266	7	NA	NA	-21859	-538	intron_retention	FALSE	canonical	1	76359	junction_6	393955.9130681429	NA	0	NA	TRUE	NA	NA	NA	B	coding	333	1002	130	1131	100.0	0	True	NA	NA
PB.7600.2	chr22	+	1706	11	novel_not_in_catalog	USP18	novel	2129	11	NA	NA	271	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82244.23020011799	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	160	1116	35.0	0	True	AATAAA	-13
PB.11809.5	chr9	-	2365	6	full-splice_match	ST6GALNAC6	ENST00000373144.7	2406	6	42	-1	-7	0	multi-exon	FALSE	canonical	1	110754	junction_5	177754.12244220948	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	188	1087	5.0	-11	True	AATAAA	-17
PB.11809.4	chr9	-	2413	7	full-splice_match	ST6GALNAC6	ENST00000373146.5	2460	7	47	0	0	0	multi-exon	FALSE	canonical	1	80145	junction_6	200754.8351663458	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	134	1135	5.0	-4	True	AATAAA	-17
PB.9372.3	chr5	+	3018	3	full-splice_match	C5orf30	ENST00000319933.6	3049	3	33	-2	33	2	multi-exon	FALSE	canonical	1	79186	junction_1	58246.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	276	896	0.0	4	True	AATAAA	-17
PB.11119.12	chr8	+	2034	9	novel_not_in_catalog	AC110275.1	novel	623	6	NA	NA	38217	8446	intron_retention	TRUE	canonical	1	956	junction_1	161357.66660202423	NA	0	NA	TRUE	NA	NA	NA	B	coding	228	687	850	1536	55.0	-6466	False	AATAAA	-16
PB.11003.1	chr8	+	1930	10	full-splice_match	SH2D4A	ENST00000519207.5	1984	10	17	37	17	-37	multi-exon	FALSE	canonical	1	36115	junction_1	44911.07836108543	NA	2	NA	TRUE	NA	NA	NA	A	coding	454	1365	292	1656	75.0	-8	True	NA	NA
PB.3306.9	chr14	-	2157	10	novel_in_catalog	METTL3	novel	1462	8	NA	NA	-15	0	intron_retention	FALSE	canonical	1	473795	junction_9	117071.83446336392	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	135	1772	25.0	-18	True	AATAAA	-13
PB.3306.8	chr14	-	2405	8	novel_in_catalog	METTL3	novel	1462	8	NA	NA	-8	4	intron_retention	FALSE	canonical	1	473795	junction_7	107761.32135683669	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	96	1442	20.0	21	True	AATAAA	-17
PB.3306.7	chr14	-	3177	7	novel_in_catalog	METTL3	novel	1462	8	NA	NA	9	-2	intron_retention	FALSE	canonical	1	473795	junction_6	112387.60702240361	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	107	1369	20.0	10	True	AATAAA	-19
PB.3306.6	chr14	-	1910	11	full-splice_match	METTL3	ENST00000298717.8	2015	11	104	1	-12	-1	multi-exon	FALSE	canonical	1	473795	junction_10	111461.15847617053	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	49	1791	20.0	-3	True	AATAAA	-20
PB.4066.10	chr15	+	4851	39	novel_in_catalog	FANCI	novel	4713	37	NA	NA	4	2	no_combination_of_known_junctions	FALSE	canonical	1	3548	junction_1	140022.23214713464	NA	3	1	TRUE	NA	NA	NA	C	coding	1328	3987	193	4179	15.0	0	True	AATAAA	-16
PB.3306.4	chr14	-	2177	9	full-splice_match	METTL3	ENST00000543235.5	2124	9	-19	-34	9	-1	multi-exon	FALSE	canonical	1	29951	junction_6	245254.51292811998	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	107	883	20.0	10	True	AATAAA	-20
PB.3306.3	chr14	-	3745	6	novel_in_catalog	METTL3	novel	1462	8	NA	NA	12	-1	intron_retention	FALSE	canonical	1	473795	junction_5	122646.75814614914	NA	3	NA	TRUE	NA	NA	NA	C	coding	305	918	76	993	20.0	41	True	AATAAA	-20
PB.3306.2	chr14	-	2241	9	novel_in_catalog	METTL3	novel	1462	8	NA	NA	2	0	intron_retention	FALSE	canonical	1	473795	junction_8	101025.3582559071	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	86	1603	15.0	31	True	AATAAA	-26
PB.3306.1	chr14	-	2866	8	novel_in_catalog	METTL3	novel	1462	8	NA	NA	9	6	intron_retention	FALSE	canonical	1	473795	junction_7	107969.1191432598	NA	1	1	TRUE	NA	NA	NA	C	coding	305	918	107	1024	20.0	10	True	AATAAA	-32
PB.8115.3	chr3	-	1622	7	novel_not_in_catalog	AC104452.1	novel	4453	14	NA	NA	-1	-2731	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	64587.40233052848	NA	0	NA	TRUE	NA	NA	NA	B	coding	213	642	77	718	10.0	-6	True	NA	NA
PB.4838.14	chr17	+	3168	9	full-splice_match	WSB1	ENST00000467843.6	4187	9	257	762	4	-18	multi-exon	FALSE	canonical	1	787038	junction_1	313490.6628999299	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	47	781	90.0	236	False	NA	NA
PB.4838.15	chr17	+	3808	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	-3	-12	any annotated donor/acceptor	FALSE	canonical	1	9871	junction_6	466878.3421054259	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	288	1022	75.0	-5	True	ATTAAA	-8
PB.4838.16	chr17	+	3580	9	full-splice_match	WSB1	ENST00000467843.6	4187	9	16	591	-3	153	multi-exon	FALSE	canonical	1	787038	junction_1	313490.6628999299	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	288	1022	75.0	-5	True	NA	NA
PB.4838.17	chr17	+	3240	8	novel_in_catalog	WSB1	novel	943	4	NA	NA	-3	-18	combination_of_known_junctions	FALSE	canonical	1	30337	junction_1	512605.24528235133	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	2081	2740	90.0	-5	True	NA	NA
PB.4838.10	chr17	+	2933	9	full-splice_match	WSB1	ENST00000467843.6	4187	9	209	1045	-44	-301	multi-exon	FALSE	canonical	1	787038	junction_1	313490.6628999299	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	95	829	50.0	188	False	TATAAA	-16
PB.4838.11	chr17	+	4271	8	novel_in_catalog	WSB1	novel	943	4	NA	NA	-4	-18	intron_retention	FALSE	canonical	1	787038	junction_1	313926.359398155	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	289	1032	90.0	-6	True	NA	NA
PB.4838.12	chr17	+	4159	9	full-splice_match	WSB1	ENST00000467843.6	4187	9	15	13	-4	-13	multi-exon	FALSE	canonical	1	787038	junction_1	313490.6628999299	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	289	1023	75.0	-6	True	ATTAAA	-7
PB.4838.13	chr17	+	3979	9	full-splice_match	WSB1	ENST00000467843.6	4187	9	15	193	-4	-193	multi-exon	FALSE	canonical	1	787038	junction_1	313490.6628999299	NA	3	1	TRUE	NA	NA	NA	C	coding	244	735	289	1023	85.0	-6	True	NA	NA
PB.8076.4	chr3	+	2466	10	novel_not_in_catalog	KLHL18	novel	560	4	NA	NA	-2	68	any annotated donor/acceptor	FALSE	canonical	1	39340	junction_6	35146.146911025084	NA	3	1	TRUE	NA	NA	NA	C	coding	579	1740	23	1762	70.0	0	True	AAAAAG	-45
PB.8076.5	chr3	+	4492	9	full-splice_match	KLHL18	ENST00000442272.1	2249	9	-7	-2236	-6	-3	multi-exon	FALSE	canonical	1	3596	junction_1	48798.01397598062	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	232	1620	10.0	-4	True	AATAAA	-14
PB.8076.6	chr3	+	7535	10	full-splice_match	KLHL18	ENST00000232766.5	4620	10	-2	-2913	-2	2913	multi-exon	FALSE	canonical	1	90135	junction_6	23201.516746928955	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	23	1747	15.0	0	True	NA	NA
PB.330.7	chr1	+	4730	9	novel_in_catalog	NFYC	novel	943	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	39437	junction_1	136426.96808222844	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	298	1182	20.0	-38	True	AATAAA	-14
PB.4838.18	chr17	+	2965	9	full-splice_match	WSB1	ENST00000467843.6	4187	9	16	1206	-3	-462	multi-exon	FALSE	canonical	1	787038	junction_1	313490.6628999299	NA	2	1	TRUE	NA	NA	NA	C	coding	244	735	288	1022	30.0	-5	True	AATACA	-16
PB.4838.19	chr17	+	2229	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	-3	-18	any annotated donor/acceptor	FALSE	canonical	1	52433	junction_6	456602.5065437384	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	288	1022	90.0	-5	True	NA	NA
PB.8076.2	chr3	+	4634	10	novel_not_in_catalog	KLHL18	novel	560	4	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	39340	junction_6	35146.146911025084	NA	4	2	TRUE	NA	NA	NA	C	coding	579	1740	24	1763	15.0	-1	True	AATAAA	-13
PB.8076.3	chr3	+	4620	10	full-splice_match	KLHL18	ENST00000232766.5	4620	10	-4	4	-4	-4	multi-exon	FALSE	canonical	1	90135	junction_6	23201.516746928955	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	25	1749	15.0	-2	True	AATAAA	-13
PB.11064.1	chr8	-	1887	1	antisense	novelGene_AC108449.2_AS_novelGene_HMBOX1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	101	306	138	443	100.0	2954	False	AGTAAA	-28
PB.6519.16	chr2	+	2009	2	novel_not_in_catalog	PLEK	novel	2869	9	NA	NA	-45	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-9302	False	AATAAA	-20
PB.6519.10	chr2	+	2667	8	novel_in_catalog	PLEK	novel	2869	9	NA	NA	109	-1	no_combination_of_known_junctions	FALSE	canonical	1	5296	junction_3	390680.45450240286	NA	3	NA	TRUE	NA	NA	NA	C	coding	172	519	513	1031	15.0	0	True	AATAAA	-21
PB.10355.1	chr7	-	2178	11	full-splice_match	ADAP1	ENST00000265846.9	2363	11	187	-2	187	0	multi-exon	FALSE	canonical	1	117114	junction_10	76651.41433528803	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	34	1158	15.0	203	False	AATAAA	-22
PB.10355.2	chr7	-	2211	9	novel_in_catalog	ADAP1	novel	1946	9	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	1	7327	junction_8	112133.28427144191	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	594	1196	10.0	-6	True	AATAAA	-17
PB.899.1	chr1	+	1405	7	full-splice_match	UCK2	ENST00000367879.8	1375	7	-38	8	-38	1	multi-exon	FALSE	canonical	1	592800	junction_1	100720.66313558615	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	342	1127	35.0	-331	False	TATAAA	-15
PB.9662.6	chr5	+	2772	6	novel_in_catalog	ZNF354B	novel	2802	5	NA	NA	308	19	combination_of_known_junctions	FALSE	canonical	1	22974	junction_5	32282.54848428172	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	54	1892	30.0	878	False	NA	NA
PB.6519.18	chr2	+	2091	4	novel_not_in_catalog	PLEK	novel	2869	9	NA	NA	1055	-1	any annotated donor/acceptor	FALSE	canonical	1	4224	junction_1	558594.3203317493	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-8202	False	AATAAA	-21
PB.6519.19	chr2	+	1929	3	incomplete-splice_match	PLEK	ENST00000474788.1	742	4	5217	-1734	5217	-2	5prime_fragment	FALSE	canonical	1	1089749	junction_2	89295.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6	True	AATAAA	-20
PB.7449.1	chr21	+	2122	2	novel_not_in_catalog	FP236383.1	novel	2498	7	NA	NA	8794	-17173	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	NA	False	NA	NA
PB.4928.23	chr17	-	5584	15	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-5	2913	combination_of_known_junctions	FALSE	canonical	1	51506	junction_8	69079.19566866418	NA	2	NA	TRUE	NA	NA	NA	C	coding	979	2940	62	3001	25.0	-19	True	AATAAA	-21
PB.4928.22	chr17	-	4060	17	incomplete-splice_match	SYNRG	ENST00000612223.4	8229	22	79	23817	-6	2012	3prime_fragment	FALSE	canonical	1	60436	junction_11	59512.80516252363	NA	2	NA	TRUE	NA	NA	NA	C	coding	1192	3579	63	3641	75.0	-20	True	NA	NA
PB.4928.21	chr17	-	5142	20	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-1	1364	combination_of_known_junctions	FALSE	canonical	1	25093	junction_18	72159.84264716953	NA	2	NA	TRUE	NA	NA	NA	C	coding	1279	3840	58	3897	40.0	-15	True	ATTAAA	-15
PB.4928.20	chr17	-	4212	20	full-splice_match	SYNRG	ENST00000621136.4	4841	20	-6	635	-6	-4	multi-exon	FALSE	canonical	1	31414	junction_14	62938.32431279005	NA	1	NA	TRUE	NA	NA	NA	C	coding	1224	3675	63	3737	20.0	-20	True	AATAAA	-17
PB.2904.1	chr12	-	3111	3	novel_in_catalog	PHETA1	novel	3256	4	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	47470	junction_2	10277.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	249	750	365	1114	20.0	0	True	AGTAAA	-13
PB.4928.25	chr17	-	2305	6	incomplete-splice_match	SYNRG	ENST00000619976.1	1375	10	6	11176	6	1313	3prime_fragment	FALSE	canonical	1	68105	junction_5	86619.37368649118	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	78	788	85.0	-35	True	NA	NA
PB.4979.17	chr17	-	4057	26	novel_in_catalog	ACLY	novel	4339	29	NA	NA	-4	-3	no_combination_of_known_junctions	FALSE	canonical	1	4166	junction_1	442917.2471749295	NA	2	NA	TRUE	NA	NA	NA	C	coding	987	2964	136	3099	15.0	-19	True	AATAAA	-21
PB.5014.23	chr17	+	2774	9	incomplete-splice_match	NBR1	ENST00000590996.5	3446	21	23134	-948	4434	-220	5prime_fragment	FALSE	canonical	1	623422	junction_8	102578.9545785952	NA	0	NA	TRUE	NA	NA	NA	B	coding	378	1137	243	1379	25.0	5270	False	AATAAA	-17
PB.5014.20	chr17	+	2809	18	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	2	116	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	251612.98433017387	NA	6	1	TRUE	NA	NA	NA	B	coding	772	2319	456	2774	25.0	2	True	ATTAAA	-17
PB.5014.21	chr17	+	4206	17	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	0	-220	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	247541.33373021483	NA	8	2	TRUE	NA	NA	NA	B	coding	734	2205	447	2651	25.0	11	True	AATAAA	-17
PB.11241.8	chr8	-	5701	24	novel_not_in_catalog	VIRMA	novel	6528	24	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	90866.58818428977	NA	22	3	TRUE	NA	NA	NA	C	coding	1810	5433	85	5517	20.0	-9	False	AATAAA	-18
PB.6450.4	chr2	+	2221	1	novel_in_catalog	RHOQ	novel	2975	5	NA	NA	459	-158	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	8607	False	ATTAAA	-24
PB.6489.58	chr2	-	4107	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-93	-5	intron_retention	FALSE	canonical	1	18674	junction_19	373615.4542799442	NA	2	NA	TRUE	NA	NA	NA	C	coding	1052	3159	834	3992	5.0	-28	True	ATTAAA	-16
PB.6489.59	chr2	-	3428	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	43	junction_25	364572.1398856122	NA	3	1	TRUE	NA	NA	NA	C	coding	1067	3204	112	3315	5.0	14	True	ATTAAA	-14
PB.10013.5	chr6	+	3295	24	full-splice_match	TMEM63B	ENST00000323267.10	3198	24	-97	0	-12	0	multi-exon	FALSE	canonical	1	72462	junction_1	101885.0170123498	NA	3	NA	TRUE	NA	NA	NA	C	coding	832	2499	162	2660	15.0	-12	True	AATAAA	-18
PB.6489.54	chr2	-	3882	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-10	5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_25	364577.93375179253	NA	7	1	TRUE	NA	NA	NA	C	coding	1067	3204	554	3757	25.0	-13	True	ATTAAA	-26
PB.6489.55	chr2	-	3908	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-13	1	intron_retention	FALSE	canonical	1	27096	junction_8	375197.75272960006	NA	2	NA	TRUE	NA	NA	NA	C	coding	1022	3069	719	3787	10.0	-16	True	ATTAAA	-22
PB.6489.53	chr2	-	4008	25	full-splice_match	XPO1	ENST00000401558.6	4915	25	51	856	-1	-5	multi-exon	FALSE	canonical	1	779959	junction_24	270173.5977223204	NA	3	NA	TRUE	NA	NA	NA	C	coding	1067	3204	690	3893	5.0	13	True	ATTAAA	-16
PB.6489.50	chr2	-	4239	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-81	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	3	NA	TRUE	NA	NA	NA	C	coding	1067	3204	152	3355	15.0	-16	True	AATAAA	-14
PB.6489.51	chr2	-	5039	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	7566	junction_25	427146.02989816025	NA	2	NA	TRUE	NA	NA	NA	C	coding	1067	3204	952	4155	15.0	-17	True	AATAAA	-14
PB.8991.8	chr4	+	2225	16	novel_not_in_catalog	NAA15	novel	6222	20	NA	NA	52	-9053	any annotated donor/acceptor	FALSE	canonical	1	66	junction_1	175808.99320147294	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1674	551	2224	70.0	1	True	AATAAA	-32
PB.8991.1	chr4	+	2039	14	incomplete-splice_match	NAA15	ENST00000296543.9	6222	20	5	29477	5	2048	3prime_fragment	FALSE	canonical	1	245632	junction_1	105828.70011094154	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1719	319	2037	55.0	-46	False	NA	NA
PB.8991.2	chr4	+	5585	20	full-splice_match	NAA15	ENST00000296543.9	6222	20	36	601	36	-587	multi-exon	FALSE	canonical	1	240063	junction_17	110948.70715563532	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	288	2888	45.0	-15	True	AATAAA	-12
PB.8991.3	chr4	+	1840	15	incomplete-splice_match	NAA15	ENST00000398947.1	6072	20	175	21086	175	-9053	3prime_fragment	FALSE	canonical	1	245632	junction_1	114040.06273962744	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1824	16	1839	70.0	257	False	AATAAA	-32
PB.8991.4	chr4	+	3006	20	full-splice_match	NAA15	ENST00000296543.9	6222	20	39	3177	39	1658	multi-exon	FALSE	canonical	1	240063	junction_17	110948.70715563532	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	285	2885	25.0	-12	True	AGTAAA	-14
PB.8991.5	chr4	+	5433	20	full-splice_match	NAA15	ENST00000296543.9	6222	20	42	747	42	-733	multi-exon	FALSE	canonical	1	240063	junction_17	110948.70715563532	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	282	2882	25.0	-9	True	AGTAAA	-20
PB.8991.6	chr4	+	4104	20	full-splice_match	NAA15	ENST00000296543.9	6222	20	50	2068	50	-2054	multi-exon	FALSE	canonical	1	240063	junction_17	110948.70715563532	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	274	2874	45.0	-1	True	AATAAA	-9
PB.8991.7	chr4	+	5093	20	full-splice_match	NAA15	ENST00000296543.9	6222	20	51	1078	51	-1064	multi-exon	FALSE	canonical	1	240063	junction_17	110948.70715563532	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	273	2873	30.0	0	True	AATAAA	-23
PB.7683.2	chr22	-	3134	5	novel_in_catalog	RHBDD3	novel	1794	7	NA	NA	8	-4	intron_retention	FALSE	canonical	1	32561	junction_2	102888.17153194774	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	1669	2337	15.0	10	True	AATAAA	-35
PB.1560.5	chr10	-	3011	4	novel_in_catalog	ENTPD1-AS1	novel	4241	6	NA	NA	-30	2040	combination_of_known_junctions	FALSE	canonical	1	23798	junction_3	29437.571121876812	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	994	1434	40.0	-11	True	NA	NA
PB.1560.4	chr10	-	3388	6	novel_not_in_catalog	ENTPD1-AS1	novel	4241	6	NA	NA	-8	2040	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	33157.394919384125	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1371	1811	40.0	11	True	NA	NA
PB.1560.3	chr10	-	3124	5	full-splice_match	ENTPD1-AS1	ENST00000452942.6	864	5	-21	-2239	-20	2041	multi-exon	FALSE	canonical	0	0	junction_2	36722.17051302251	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1106	1546	35.0	-1	True	NA	NA
PB.1560.2	chr10	-	3251	5	novel_in_catalog	ENTPD1-AS1	novel	4241	6	NA	NA	-29	2044	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	36450.2798377461	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1230	1670	30.0	-10	True	NA	NA
PB.1560.1	chr10	-	3348	7	novel_not_in_catalog	ENTPD1-AS1	novel	4241	6	NA	NA	-1	2086	any annotated donor/acceptor	FALSE	canonical	1	370	junction_3	33905.15109053818	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1285	1725	25.0	-1	True	NA	NA
PB.7683.4	chr22	-	3014	6	novel_in_catalog	RHBDD3	novel	1794	7	NA	NA	1	-21	intron_retention	FALSE	canonical	1	127458	junction_3	57767.26188768168	NA	1	1	TRUE	NA	NA	NA	C	coding	389	1170	1658	2827	15.0	21	False	AATAAA	-18
PB.10349.2	chr7	-	2810	2	full-splice_match	AC093627.5	ENST00000497320.2	746	2	9	-2073	9	-1494	multi-exon	FALSE	canonical	1	20050	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-297	False	NA	NA
PB.10349.1	chr7	-	3680	3	novel_not_in_catalog	AC093627.5	novel	662	4	NA	NA	-16	-9	intron_retention	FALSE	canonical	1	4559	junction_1	7745.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	3208	3588	35.0	-322	False	NA	NA
PB.6686.2	chr2	+	5547	23	full-splice_match	RGPD5	ENST00000016946.7	7253	23	-9	1715	-6	-1715	multi-exon	FALSE	canonical	1	993	junction_6	2034.3167248956297	NA	0	NA	TRUE	NA	NA	NA	C	coding	1765	5298	168	5465	25.0	-6	True	AATAGA	-12
PB.11012.1	chr8	+	2483	14	novel_not_in_catalog	DMTN	novel	616	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	285530.45052920067	NA	1	1	TRUE	NA	NA	NA	A	coding	383	1152	271	1422	15.0	-3973	False	ATTAAA	-19
PB.8860.1	chr4	-	3528	18	full-splice_match	HELQ	ENST00000295488.7	3579	18	14	37	13	-7	multi-exon	FALSE	canonical	1	26921	junction_12	17224.92450071591	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	150	3455	60.0	-20	True	NA	NA
PB.8882.1	chr4	+	3180	2	full-splice_match	TIGD2	ENST00000603357.2	3217	2	5	32	5	-32	multi-exon	FALSE	canonical	1	48255	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	1288	2865	45.0	-126	False	NA	NA
PB.8562.2	chr3	+	1949	15	incomplete-splice_match	PSMD2	ENST00000310118.8	3449	21	497	2621	8	330	3prime_fragment	FALSE	canonical	1	70149	junction_7	415787.57075662306	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1887	62	1948	65.0	-1375	False	NA	NA
PB.2216.4	chr11	-	2324	18	novel_in_catalog	NOX4	novel	4184	18	NA	NA	-91488	-1	no_combination_of_known_junctions	FALSE	canonical	1	30	junction_17	8269.862592633452	NA	2	NA	TRUE	NA	NA	NA	C	coding	554	1665	252	1916	20.0	NA	False	ATTAAA	-15
PB.11752.1	chr9	-	6005	37	full-splice_match	CDK5RAP2	ENST00000360190.8	5985	37	-14	-6	-2	0	multi-exon	FALSE	canonical	1	83570	junction_6	85068.66205384886	NA	0	NA	TRUE	NA	NA	NA	C	coding	1813	5442	198	5639	10.0	-14	True	ATTAAA	-23
PB.6906.2	chr2	-	3887	9	novel_in_catalog	NEMP2	novel	6168	9	NA	NA	-89	-2552	combination_of_known_junctions	FALSE	canonical	1	4913	junction_8	22228.257455320243	NA	1	NA	TRUE	NA	NA	NA	C	coding	348	1047	546	1592	20.0	3609	False	AATAAA	-16
PB.6906.3	chr2	-	3455	9	novel_in_catalog	NEMP2	novel	6168	9	NA	NA	0	-2552	combination_of_known_junctions	FALSE	canonical	1	10339	junction_7	23309.767946815235	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	354	1160	20.0	-2	True	AATAAA	-16
PB.2216.5	chr11	-	2336	17	full-splice_match	NOX4	ENST00000534731.5	2156	17	-230	50	7	-2	multi-exon	FALSE	canonical	1	1836	junction_4	7138.003138735213	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	313	1929	20.0	106	False	ATTAAA	-14
PB.6906.4	chr2	-	3041	9	full-splice_match	NEMP2	ENST00000409150.7	6168	9	0	3127	0	3029	multi-exon	FALSE	canonical	1	26730	junction_8	15883.09584068468	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	68	1321	15.0	-2	True	TATAAA	-19
PB.6906.5	chr2	-	1815	9	full-splice_match	NEMP2	ENST00000409150.7	6168	9	11	4342	11	1814	multi-exon	FALSE	canonical	1	26730	junction_8	15883.09584068468	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	57	1310	45.0	9	True	NA	NA
PB.3137.1	chr13	+	2404	6	full-splice_match	DNAJC15	ENST00000379221.3	7853	6	393	5056	393	-5056	multi-exon	FALSE	canonical	1	789413	junction_1	155052.3704512769	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	32	484	40.0	6	True	NA	NA
PB.11716.2	chr9	-	6011	50	novel_in_catalog	ECPAS	novel	7078	49	NA	NA	-26	-3	intron_retention	FALSE	canonical	1	26493	junction_49	233582.75349265302	NA	0	NA	TRUE	NA	NA	NA	C	coding	1839	5520	351	5870	25.0	-1	True	AATAAA	-14
PB.2216.3	chr11	-	2399	18	novel_not_in_catalog	NOX4	novel	4184	18	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	3023	junction_5	7471.907080900132	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	477	1991	20.0	3	True	ATTAAA	-15
PB.5201.2	chr17	-	1363	3	full-splice_match	C17orf58	ENST00000449250.3	1082	3	-47	-234	-40	0	multi-exon	FALSE	canonical	1	62867	junction_2	44136.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	97	294	259	552	20.0	-52	True	AATAAA	-16
PB.5201.1	chr17	-	2511	1	genic	C17orf58	novel	NA	NA	NA	NA	39	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-70	True	AATAAA	-18
PB.2286.6	chr11	-	2626	16	full-splice_match	ZW10	ENST00000200135.7	2992	16	79	287	3	-199	multi-exon	FALSE	canonical	1	114413	junction_15	31496.933306522962	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	67	2406	15.0	37	False	AGTAAA	-16
PB.2933.1	chr12	-	2001	2	full-splice_match	HRK	ENST00000257572.5	5789	2	280	3508	-73	1475	multi-exon	FALSE	canonical	1	22929	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	277	False	NA	NA
PB.8107.4	chr3	-	4702	27	novel_in_catalog	USP19	novel	3907	24	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	112715	junction_24	113131.7981967788	NA	0	NA	TRUE	NA	NA	NA	C	coding	1369	4110	311	4420	30.0	-14	True	TATAAA	-19
PB.8107.7	chr3	-	4622	27	novel_in_catalog	USP19	novel	3907	24	NA	NA	-5	-24	combination_of_known_junctions	FALSE	canonical	1	2017	junction_22	129029.48526676801	NA	0	NA	TRUE	NA	NA	NA	C	coding	1359	4080	205	4284	70.0	-20	True	AATATA	-5
PB.8107.6	chr3	-	4639	27	full-splice_match	USP19	ENST00000417901.5	4706	27	-13	80	-3	1	multi-exon	FALSE	canonical	1	188593	junction_24	107378.44552079127	NA	0	NA	TRUE	NA	NA	NA	C	coding	1384	4155	203	4357	30.0	-18	True	TATAAA	-19
PB.8107.1	chr3	-	4412	26	novel_not_in_catalog	USP19	novel	3907	24	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	21561	junction_21	144525.66503955759	NA	2	NA	TRUE	NA	NA	NA	C	coding	1283	3852	200	4051	25.0	-15	True	AATAAA	-15
PB.8107.2	chr3	-	4035	23	novel_not_in_catalog	USP19	novel	3907	24	NA	NA	156	-1	any annotated donor/acceptor	FALSE	canonical	1	45334	junction_20	121301.093249657	NA	2	1	TRUE	NA	NA	NA	C	coding	1192	3579	96	3674	25.0	3360	False	AATAAA	-15
PB.2261.1	chr11	+	4939	2	full-splice_match	RAB39A	ENST00000320578.2	1830	2	99	-3208	99	3208	multi-exon	FALSE	canonical	1	20834	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	105	318	304	621	25.0	14	False	AATAAA	-15
PB.8107.9	chr3	-	4517	26	novel_in_catalog	USP19	novel	3907	24	NA	NA	-8	-24	combination_of_known_junctions	FALSE	canonical	1	21561	junction_21	122733.71110298262	NA	0	NA	TRUE	NA	NA	NA	C	coding	1283	3852	328	4179	70.0	-31	False	AATATA	-5
PB.8107.8	chr3	-	4601	27	novel_not_in_catalog	USP19	novel	3907	24	NA	NA	15	-24	any annotated donor/acceptor	FALSE	canonical	1	3352	junction_21	144485.88726458588	NA	3	1	TRUE	NA	NA	NA	C	coding	1321	3966	298	4263	70.0	-1	True	AATATA	-5
PB.7047.12	chr2	+	5043	9	full-splice_match	RHBDD1	ENST00000392062.6	5151	9	108	0	7	0	multi-exon	FALSE	canonical	1	5774	junction_1	78934.66223719463	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	417	1364	60.0	9	True	NA	NA
PB.2562.8	chr12	-	3319	16	novel_not_in_catalog	SCAF11	novel	416	3	NA	NA	5	409	any annotated donor/acceptor	FALSE	canonical	1	5752	junction_5	144099.1410003543	NA	1	NA	TRUE	NA	NA	NA	C	coding	676	2031	241	2271	90.0	-8	True	NA	NA
PB.2562.9	chr12	-	5673	15	full-splice_match	SCAF11	ENST00000369367.7	7543	15	1	1869	1	409	multi-exon	FALSE	canonical	1	286070	junction_12	97789.69851593128	NA	0	NA	TRUE	NA	NA	NA	C	coding	1463	4392	234	4625	90.0	-1	True	NA	NA
PB.8086.1	chr3	-	3927	6	full-splice_match	NME6	ENST00000643457.1	1320	6	22	-2629	1	-644	multi-exon	FALSE	canonical	1	38763	junction_5	77134.02083646359	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	96	656	60.0	0	True	NA	NA
PB.8086.3	chr3	-	3692	5	full-splice_match	NME6	ENST00000435684.5	599	5	-3	-3090	-2	-843	multi-exon	FALSE	canonical	1	38763	junction_4	100048.26650016231	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	100	591	80.0	-4	True	NA	NA
PB.2289.3	chr11	+	3346	6	novel_not_in_catalog	RBM7	novel	4243	5	NA	NA	-4	-197	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	71909.03021012034	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	70	873	20.0	-21	True	AATAAA	-19
PB.2562.1	chr12	-	4706	15	novel_in_catalog	SCAF11	novel	416	3	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	1	35503	junction_1	142457.91665854826	NA	1	NA	TRUE	NA	NA	NA	C	coding	1426	4281	284	4564	30.0	1444	False	AATAAA	-17
PB.339.1	chr1	+	2333	9	incomplete-splice_match	PPIH	ENST00000304979.7	752	10	-2	7564	-2	1754	3prime_fragment	TRUE	canonical	1	343614	junction_4	259051.4200491562	NA	2	NA	TRUE	NA	NA	NA	A	coding	177	534	25	558	90.0	0	True	NA	NA
PB.2562.3	chr12	-	2320	16	novel_not_in_catalog	SCAF11	novel	416	3	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	canonical	1	5752	junction_5	170691.86149245664	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	260	2179	30.0	3	True	AATAAA	-16
PB.2562.4	chr12	-	7605	15	full-splice_match	SCAF11	ENST00000369367.7	7543	15	-64	2	-45	-2	multi-exon	FALSE	canonical	1	286070	junction_12	97789.69851593128	NA	5	NA	TRUE	NA	NA	NA	C	coding	1463	4392	299	4690	30.0	1429	False	AATAAA	-16
PB.403.3	chr1	-	4513	30	novel_in_catalog	NRDC	novel	1660	16	NA	NA	-2	0	intron_retention	FALSE	canonical	1	742738	junction_24	306729.8780018461	NA	1	NA	TRUE	NA	NA	NA	C	coding	1062	3189	159	3347	45.0	31	False	AATAAA	-24
PB.2562.6	chr12	-	5192	16	novel_not_in_catalog	SCAF11	novel	416	3	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	canonical	1	5752	junction_5	144099.1410003543	NA	1	NA	TRUE	NA	NA	NA	C	coding	676	2031	248	2278	30.0	-15	True	AATAAA	-15
PB.2562.7	chr12	-	7481	15	novel_in_catalog	SCAF11	novel	416	3	NA	NA	82	-3	combination_of_known_junctions	FALSE	canonical	1	15303	junction_14	147263.73511915587	NA	7	NA	TRUE	NA	NA	NA	C	coding	1463	4392	176	4567	30.0	20	True	AATAAA	-15
PB.6845.16	chr2	-	3828	6	novel_in_catalog	SP3	novel	6359	7	NA	NA	-63	-6	combination_of_known_junctions	FALSE	canonical	1	5977	junction_4	170995.96541439215	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	203	2425	10.0	-1	True	AATAAA	-15
PB.6845.17	chr2	-	3777	7	full-splice_match	SP3	ENST00000310015.10	6359	7	328	2254	-64	-181	multi-exon	FALSE	canonical	1	79066	junction_5	148885.0200823329	NA	21	NA	TRUE	NA	NA	NA	C	coding	781	2346	204	2549	30.0	-2	True	AATAAA	-22
PB.6845.14	chr2	-	2240	4	novel_in_catalog	SP3	novel	6359	7	NA	NA	-49	0	no_combination_of_known_junctions	FALSE	canonical	1	3564	junction_3	188653.6366648915	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	451	831	15.0	-5	True	AATAAA	-21
PB.5077.21	chr17	+	2732	12	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23081	46	intron_retention	FALSE	canonical	1	179310	junction_11	240824.382398845	NA	0	NA	TRUE	NA	NA	NA	B	coding	419	1260	1193	2452	15.0	-8	True	AATAAA	-27
PB.5077.20	chr17	+	2810	12	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23081	36	intron_retention	FALSE	canonical	1	25716	junction_11	274579.72208196943	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	1822	2772	20.0	-8	True	AATAAA	-17
PB.8483.6	chr3	+	3639	13	incomplete-splice_match	GMPS	ENST00000496455.6	8751	16	95	10423	-19	-4107	3prime_fragment	FALSE	canonical	1	435412	junction_12	184218.84821207446	NA	4	1	TRUE	NA	NA	NA	C	coding	570	1713	241	1953	15.0	-31	True	AATAAA	-16
PB.6845.19	chr2	-	1856	5	novel_not_in_catalog	SP3	novel	6359	7	NA	NA	144	-8716	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	139470.69060088394	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1731	125	1855	50.0	1127	False	NA	NA
PB.6977.2	chr2	-	2758	3	incomplete-splice_match	PLEKHM3	ENST00000457206.1	3689	8	-49	75875	13	-75875	3prime_fragment	FALSE	canonical	1	32304	junction_2	7373.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	478	2049	80.0	-21	True	AGTAAA	-8
PB.11122.2	chr8	+	2824	8	incomplete-splice_match	SPIDR	ENST00000524141.5	2761	15	-50	271226	-8	1673	3prime_fragment	FALSE	canonical	1	158491	junction_1	62435.20487085236	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	55	1155	20.0	1	True	AATATA	-15
PB.12261.4	chrX	-	4098	9	novel_not_in_catalog	ELF4	novel	4145	9	NA	NA	-10836	-2	intron_retention	FALSE	canonical	1	631	junction_8	88657.4969795984	NA	22	1	TRUE	NA	NA	NA	C	coding	663	1992	316	2307	25.0	4863	False	AATAAA	-17
PB.12261.5	chrX	-	3935	8	novel_in_catalog	ELF4	novel	4145	9	NA	NA	-57	3	intron_retention	FALSE	canonical	1	18754	junction_7	86579.75567401093	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	358	2145	25.0	383	False	AATAAA	-16
PB.12261.2	chrX	-	4120	9	full-splice_match	ELF4	ENST00000335997.11	4145	9	-28	53	-28	1	multi-exon	FALSE	canonical	1	23189	junction_8	81974.24285560679	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	335	2326	30.0	191	False	AATAAA	-20
PB.12261.3	chrX	-	4575	9	novel_not_in_catalog	ELF4	novel	4145	9	NA	NA	-5563	0	intron_retention	FALSE	canonical	1	8465	junction_8	86322.08962079174	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	791	2782	25.0	2512	False	AATAAA	-19
PB.12261.1	chrX	-	4222	9	full-splice_match	ELF4	ENST00000308167.9	4165	9	-53	-4	-53	4	multi-exon	FALSE	canonical	1	58250	junction_8	71890.84659561588	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	434	2425	35.0	387	False	AATAAA	-23
PB.8562.6	chr3	+	3147	21	novel_in_catalog	PSMD2	novel	3449	21	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	32992	junction_1	486961.0689477034	NA	1	NA	TRUE	NA	NA	NA	C	coding	820	2463	522	2984	0.0	-9	True	AATAAA	-19
PB.5215.1	chr17	+	3926	3	full-splice_match	SOX9	ENST00000245479.2	3935	3	0	9	0	-9	multi-exon	FALSE	canonical	1	354370	junction_1	24640.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	373	1902	40.0	0	True	AATAAA	-14
PB.4127.1	chr16	-	2105	6	incomplete-splice_match	TMEM8A	ENST00000431232.6	3691	13	6819	17	52	-17	5prime_fragment	FALSE	canonical	1	556873	junction_1	64384.73648746262	NA	0	NA	TRUE	NA	NA	NA	A	coding	298	897	12	908	25.0	6814	False	NA	NA
PB.5215.3	chr17	+	2516	3	full-splice_match	SOX9	ENST00000245479.2	3935	3	0	1419	0	-1419	multi-exon	FALSE	canonical	1	354370	junction_1	24640.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	373	1902	75.0	0	True	NA	NA
PB.5215.4	chr17	+	2409	2	novel_not_in_catalog	SOX9	novel	3935	3	NA	NA	1178	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	coding	41	126	260	385	40.0	1	True	AATAAA	-14
PB.5215.5	chr17	+	3154	3	novel_not_in_catalog	SOX9	novel	3935	3	NA	NA	1181	-9	any annotated donor/acceptor	FALSE	canonical	1	3554	junction_1	200048.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	252	1130	40.0	-3790	False	AATAAA	-14
PB.7574.1	chr21	+	3255	4	novel_in_catalog	MCM3AP-AS1	novel	703	3	NA	NA	-19	1438	intron_retention	FALSE	canonical	1	9114	junction_3	1674.3576546113304	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-33	False	ATTAAA	-14
PB.11122.7	chr8	+	3295	20	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	35076	junction_18	77205.08949874804	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	29	2680	20.0	-7	True	AATAAA	-14
PB.8562.8	chr3	+	3313	19	novel_in_catalog	PSMD2	novel	3449	21	NA	NA	-1	0	intron_retention	FALSE	canonical	1	70149	junction_6	447606.41169486026	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	785	1654	10.0	5	True	AATAAA	-14
PB.11122.6	chr8	+	3322	20	full-splice_match	SPIDR	ENST00000297423.8	3988	20	365	301	-2	6	multi-exon	FALSE	canonical	1	158491	junction_1	57411.296745935484	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	20	2767	10.0	2	True	CATAAA	-20
PB.8458.16	chr3	-	4279	26	full-splice_match	HLTF	ENST00000392912.6	3896	26	-50	-333	0	-225	multi-exon	FALSE	canonical	1	123809	junction_1	55973.11050615644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	219	3248	60.0	-45	True	NA	NA
PB.8458.17	chr3	-	5085	25	full-splice_match	HLTF	ENST00000310053.9	5317	25	7	225	-1	-225	multi-exon	FALSE	canonical	1	179363	junction_13	47611.726094447666	NA	2	1	TRUE	NA	NA	NA	C	coding	1009	3030	188	3217	60.0	-14	True	NA	NA
PB.8458.14	chr3	-	4486	26	novel_in_catalog	HLTF	novel	5306	25	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	1	41466	junction_7	72354.3333655587	NA	0	NA	TRUE	NA	NA	NA	C	coding	1013	3042	196	3237	25.0	-22	True	AATAAA	-7
PB.7509.5	chr21	-	5099	5	full-splice_match	RUNX1	ENST00000399240.5	1590	5	-12	-3497	-12	-488	multi-exon	FALSE	canonical	1	51354	junction_2	115988.31792684986	NA	8	NA	TRUE	NA	NA	NA	C	coding	365	1098	156	1253	45.0	3	True	AATAAA	-11
PB.11122.5	chr8	+	2905	18	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	9922	junction_5	81872.54129505648	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	643	2445	25.0	6	True	AATAAA	-10
PB.8423.1	chr3	+	2462	1	antisense	novelGene_DBR1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7509.2	chr21	-	5295	7	novel_in_catalog	RUNX1	novel	7274	6	NA	NA	36	-463	combination_of_known_junctions	FALSE	canonical	1	7528	junction_6	112793.63642030816	NA	6	1	TRUE	NA	NA	NA	C	coding	429	1290	135	1424	50.0	-5	True	AATAAA	-36
PB.11122.4	chr8	+	3878	19	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	158491	junction_1	56783.72733595057	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	50	2263	20.0	6	True	AATAAA	-15
PB.8458.18	chr3	-	3298	25	full-splice_match	HLTF	ENST00000310053.9	5317	25	-24	2043	0	-1175	multi-exon	FALSE	canonical	1	179363	junction_13	47611.726094447666	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	219	3248	50.0	-45	True	NA	NA
PB.8458.19	chr3	-	3108	25	full-splice_match	HLTF	ENST00000310053.9	5317	25	-1	2210	-1	-1342	multi-exon	FALSE	canonical	1	179363	junction_13	47611.726094447666	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2913	196	3108	75.0	-22	True	AAGAAA	-9
PB.12313.4	chrX	+	1697	3	full-splice_match	MAGEA4	ENST00000360243.6	1773	3	73	3	73	-3	multi-exon	FALSE	canonical	1	10909	junction_1	36876.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	195	1148	15.0	5411	False	AATAAA	-14
PB.8911.1	chr4	+	2386	2	incomplete-splice_match	TET2	ENST00000413648.2	4973	3	-10	6584	-2	1906	3prime_fragment	FALSE	canonical	1	32186	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	745	2235	151	2385	70.0	-10	True	NA	NA
PB.8911.2	chr4	+	2528	3	incomplete-splice_match	TET2	ENST00000380013.8	9679	11	94	43625	2	1906	3prime_fragment	FALSE	canonical	1	77254	junction_2	8358.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	745	2235	293	2527	70.0	-6	True	NA	NA
PB.8911.3	chr4	+	3291	3	incomplete-splice_match	TET2	ENST00000380013.8	9679	11	90	42866	-2	2665	3prime_fragment	FALSE	canonical	1	77254	junction_2	8358.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	998	2994	297	3290	70.0	-10	True	NA	NA
PB.8911.4	chr4	+	4451	9	novel_in_catalog	TET2	novel	9233	3	NA	NA	0	-7111	combination_of_known_junctions	FALSE	canonical	1	32186	junction_1	34241.44943631913	NA	0	NA	TRUE	NA	NA	NA	B	coding	1437	4311	141	4451	40.0	0	True	NA	NA
PB.8558.1	chr3	+	2360	15	full-splice_match	DVL3	ENST00000313143.8	5241	15	145	2736	-12	-1	multi-exon	FALSE	canonical	1	379266	junction_1	141859.21309516556	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	90	2240	20.0	54	True	AATAAA	-14
PB.11122.9	chr8	+	3281	21	novel_not_in_catalog	SPIDR	novel	3988	20	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	7673	junction_5	94094.24107143858	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	726	2816	20.0	-3	True	AATAAA	-15
PB.9057.1	chr4	+	2324	9	full-splice_match	CPE	ENST00000402744.8	2421	9	96	1	96	-1	multi-exon	FALSE	canonical	1	1738374	junction_1	393307.47162475745	NA	1	NA	TRUE	NA	NA	NA	A	coding	476	1431	185	1615	20.0	-158	False	AATAAA	-18
PB.8558.2	chr3	+	2556	14	novel_in_catalog	DVL3	novel	5335	15	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	379266	junction_1	138257.48486059022	NA	2	NA	TRUE	NA	NA	NA	C	coding	548	1647	790	2436	20.0	39	True	AATAAA	-14
PB.157.3	chr1	-	2872	10	full-splice_match	HNRNPR	ENST00000478691.5	7646	10	17	4757	-2	338	multi-exon	FALSE	non_canonical	0	0	junction_4	597455.5304401376	NA	4	1	TRUE	NA	NA	NA	C	coding	535	1608	256	1863	30.0	330	False	AATAAA	-17
PB.11294.5	chr8	-	3721	4	novel_in_catalog	ZFPM2-AS1	novel	539	6	NA	NA	-3	3137	intron_retention	FALSE	canonical	1	547	junction_1	10743.328172508844	NA	7	NA	TRUE	NA	NA	NA	C	coding	130	390	3330	3719	80.0	73	False	NA	NA
PB.157.2	chr1	-	5654	10	full-splice_match	HNRNPR	ENST00000478691.5	7646	10	45	1947	4	-1947	multi-exon	FALSE	non_canonical	0	0	junction_4	597455.5304401376	NA	8	NA	TRUE	NA	NA	NA	C	coding	535	1608	228	1835	20.0	-11	True	AATAAA	-32
PB.157.1	chr1	-	7608	10	full-splice_match	HNRNPR	ENST00000478691.5	7646	10	35	3	-6	-3	multi-exon	FALSE	non_canonical	0	0	junction_4	597455.5304401376	NA	4	1	TRUE	NA	NA	NA	C	coding	535	1608	238	1845	20.0	348	False	AATAAA	-15
PB.8976.1	chr4	+	3833	16	full-splice_match	PLK4	ENST00000270861.9	3841	16	32	-24	0	24	multi-exon	FALSE	canonical	1	111778	junction_8	25449.27614652767	NA	1	NA	TRUE	NA	NA	NA	C	coding	929	2790	366	3155	35.0	0	True	AATACA	-18
PB.8976.3	chr4	+	3568	16	novel_in_catalog	PLK4	novel	3841	16	NA	NA	0	3	no_combination_of_known_junctions	FALSE	canonical	1	2760	junction_10	44477.845708921945	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	366	2357	25.0	0	True	AATAAA	-15
PB.8976.2	chr4	+	3587	16	novel_in_catalog	PLK4	novel	3841	16	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	1	25200	junction_5	39988.55088891764	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	366	3053	25.0	0	True	AATAAA	-20
PB.8976.5	chr4	+	3665	16	full-splice_match	PLK4	ENST00000270861.9	3841	16	52	124	4	4	multi-exon	FALSE	canonical	1	111778	junction_8	25449.27614652767	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	346	3135	20.0	20	True	AATAAA	-16
PB.8976.4	chr4	+	4343	15	novel_in_catalog	PLK4	novel	3841	16	NA	NA	0	5	intron_retention	FALSE	canonical	1	6265	junction_2	44764.89891439862	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	374	1594	25.0	6	True	AATAAA	-17
PB.8976.7	chr4	+	3087	16	novel_in_catalog	PLK4	novel	3841	16	NA	NA	4	16	combination_of_known_junctions	FALSE	canonical	1	25200	junction_5	39988.55088891764	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	346	3033	35.0	20	True	AATAAA	-21
PB.8976.6	chr4	+	3203	16	full-splice_match	PLK4	ENST00000270861.9	3841	16	38	600	0	16	multi-exon	FALSE	canonical	1	111778	junction_8	25449.27614652767	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	360	3149	35.0	6	True	AATAAA	-21
PB.8976.9	chr4	+	4389	15	novel_not_in_catalog	PLK4	novel	3841	16	NA	NA	5	3	any annotated donor/acceptor	FALSE	canonical	1	7392	junction_5	45050.49504796064	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	345	1598	25.0	21	True	AATAAA	-15
PB.8976.8	chr4	+	2557	6	novel_in_catalog	PLK4	novel	3841	16	NA	NA	4	-1120	intron_retention	FALSE	canonical	1	115148	junction_2	11002.020916177173	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	346	1584	30.0	20	True	AGTAAA	-13
PB.157.6	chr1	-	2303	9	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	1	48882	junction_5	590279.6289210627	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	220	1641	50.0	-3	True	AATAAA	-17
PB.3622.8	chr14	-	2524	11	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	-9	39844	-9	9998	3prime_fragment	FALSE	canonical	1	60673	junction_10	34074.71120053698	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2139	384	2522	65.0	-32	True	AAAACA	-17
PB.3622.9	chr14	-	1932	11	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	-2	40429	-2	9413	3prime_fragment	FALSE	canonical	1	60673	junction_10	34074.71120053698	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1554	377	1930	65.0	-25	True	GATAAA	-13
PB.157.5	chr1	-	2914	11	full-splice_match	HNRNPR	ENST00000374612.5	2694	11	30	-250	3	247	multi-exon	FALSE	canonical	1	118260	junction_8	544649.1426881714	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	95	1996	70.0	-12	True	NA	NA
PB.3622.1	chr14	-	6475	21	full-splice_match	TRIP11	ENST00000267622.8	9996	21	0	3521	0	1	multi-exon	FALSE	canonical	1	31460	junction_8	47191.17497117442	NA	0	NA	TRUE	NA	NA	NA	C	coding	1979	5940	375	6314	25.0	-23	True	AATAAA	-26
PB.11125.2	chr8	+	1481	4	full-splice_match	UBE2V2	ENST00000523111.6	4373	4	16	2876	1	262	multi-exon	FALSE	canonical	1	699726	junction_1	68940.94818192032	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	40	477	25.0	-15	True	ATTAAA	-20
PB.3622.3	chr14	-	5598	16	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	1	22328	1	-13147	3prime_fragment	FALSE	canonical	1	31460	junction_3	46182.027331660334	NA	1	NA	TRUE	NA	NA	NA	C	coding	1741	5223	374	5596	65.0	-22	True	NA	NA
PB.3622.4	chr14	-	4822	12	novel_not_in_catalog	TRIP11	novel	9996	21	NA	NA	8	12239	any annotated donor/acceptor	FALSE	canonical	1	2342	junction_2	57810.112474640446	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2850	1971	4820	75.0	-15	True	NA	NA
PB.4137.1	chr16	+	1309	7	full-splice_match	STUB1	ENST00000219548.8	1472	7	109	54	-34	-1	multi-exon	FALSE	canonical	1	1138408	junction_1	250889.9531836064	NA	0	NA	TRUE	NA	NA	NA	A	coding	303	912	142	1053	10.0	-25	True	AATAAA	-14
PB.3622.6	chr14	-	3793	11	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	-10	38576	-10	11266	3prime_fragment	FALSE	canonical	1	60673	junction_10	34074.71120053698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1136	3408	385	3792	65.0	-33	True	NA	NA
PB.3622.7	chr14	-	2700	11	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	8	39651	8	10191	3prime_fragment	FALSE	canonical	1	60673	junction_10	34074.71120053698	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2334	367	2700	65.0	-15	True	ATTAAA	-37
PB.584.1	chr1	+	2020	19	full-splice_match	STXBP3	ENST00000370008.3	2478	19	-51	509	-37	-509	multi-exon	FALSE	canonical	1	285570	junction_9	58704.49084016034	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	102	1880	25.0	0	True	AATACA	-18
PB.157.9	chr1	-	3100	11	full-splice_match	HNRNPR	ENST00000302271.10	2629	11	-475	4	-401	-4	multi-exon	FALSE	canonical	1	118260	junction_8	538643.2705748768	NA	2	NA	TRUE	NA	NA	NA	C	coding	633	1902	537	2438	50.0	-88	False	AATAAA	-17
PB.5330.2	chr17	-	2015	5	full-splice_match	ARHGDIA	ENST00000582984.5	823	5	-42	-1150	-1	1	multi-exon	FALSE	canonical	1	3248680	junction_4	579119.9060792052	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	110	859	0.0	-43	True	AATAAA	-15
PB.157.8	chr1	-	2480	10	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	1	118260	junction_8	501768.801635761	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	220	1818	50.0	-3	True	AATAAA	-17
PB.5330.3	chr17	-	1766	7	novel_not_in_catalog	ARHGDIA	novel	245	2	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_1	1575549.0785922501	NA	13	NA	TRUE	NA	NA	NA	C	coding	204	615	107	721	0.0	-40	True	AATAAA	-15
PB.1912.1	chr11	-	1172	11	full-splice_match	PEX16	ENST00000378750.9	1335	11	163	0	-25	0	multi-exon	FALSE	canonical	1	218327	junction_2	116920.62470620827	NA	0	NA	TRUE	NA	NA	NA	A	coding	336	1011	82	1092	5.0	2	True	AATAAA	-19
PB.11241.2	chr8	-	5645	24	full-splice_match	VIRMA	ENST00000297591.9	6528	24	57	826	57	1	multi-exon	FALSE	canonical	1	184214	junction_21	72054.82321754147	NA	0	NA	TRUE	NA	NA	NA	C	coding	1812	5439	20	5458	15.0	0	True	AATAAA	-21
PB.6764.4	chr2	+	1630	14	full-splice_match	KYNU	ENST00000264170.8	15316	14	161	13525	2	135	multi-exon	FALSE	canonical	1	302451	junction_1	65701.82194118008	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	98	1495	40.0	-5	True	AATAAA	-16
PB.5330.1	chr17	-	1772	7	novel_not_in_catalog	ARHGDIA	novel	245	2	NA	NA	-11	2	intron_retention	FALSE	non_canonical	0	0	junction_1	1575549.0785922501	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	79	615	0.0	-12	True	AATAAA	-16
PB.2628.9	chr12	-	2583	15	novel_in_catalog	ITGB7	novel	2867	16	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	15105	junction_3	262828.3419883536	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1806	177	1982	25.0	-1	True	AATAAA	-11
PB.2628.8	chr12	-	2801	16	full-splice_match	ITGB7	ENST00000267082.9	2867	16	58	8	2	-3	multi-exon	FALSE	canonical	1	220211	junction_12	227344.72666087217	NA	80	8	TRUE	NA	NA	NA	C	coding	798	2397	175	2571	25.0	1	True	AATAAA	-11
PB.2628.4	chr12	-	2691	15	novel_in_catalog	ITGB7	novel	2867	16	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	30902	junction_14	265977.65309687855	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	60	2456	20.0	-7	True	AATAAA	-16
PB.2628.7	chr12	-	2900	16	novel_in_catalog	ITGB7	novel	2867	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	29130	junction_1	206308.11700420862	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	177	2525	20.0	-1	True	AATAAA	-13
PB.2628.6	chr12	-	3477	15	novel_in_catalog	ITGB7	novel	2867	16	NA	NA	0	-1	intron_retention	FALSE	canonical	1	220211	junction_11	227407.31445436607	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	1362	3245	20.0	-1	True	AATAAA	-13
PB.2628.1	chr12	-	2784	15	novel_in_catalog	ITGB7	novel	2867	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	29130	junction_1	241955.56025508494	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	55	2403	10.0	-2	True	AATAAA	-19
PB.2628.3	chr12	-	4055	12	novel_in_catalog	ITGB7	novel	2867	16	NA	NA	0	2	intron_retention	FALSE	canonical	1	30902	junction_11	285772.8349391471	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	2570	3820	20.0	-1	True	AATAAA	-16
PB.2628.2	chr12	-	2771	16	full-splice_match	ITGB7	ENST00000422257.7	2791	16	23	-3	-5	-2	multi-exon	FALSE	canonical	1	37150	junction_14	259807.72039297744	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	139	2535	15.0	3620	False	AATAAA	-17
PB.8904.8	chr4	-	2476	8	full-splice_match	UBE2D3	ENST00000394801.8	2368	8	185	-293	49	293	multi-exon	FALSE	canonical	1	151175	junction_6	393001.72078711394	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	301	744	25.0	-1	True	AATAAA	-37
PB.5330.4	chr17	-	1442	3	novel_not_in_catalog	ARHGDIA	novel	245	2	NA	NA	-11	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	1624340.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	851	1324	5.0	-12	True	AATAAA	-13
PB.9215.7	chr5	+	2564	3	incomplete-splice_match	NNT	ENST00000344920.8	4310	22	44	90089	-28	-891	3prime_fragment	FALSE	canonical	1	242335	junction_1	87795.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	142	429	178	606	90.0	-15	True	NA	NA
PB.9146.13	chr5	+	4534	26	novel_not_in_catalog	MARCH6	novel	3062	25	NA	NA	-18	1094	any annotated donor/acceptor	FALSE	canonical	1	1579	junction_1	233802.6068384491	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	311	2839	80.0	-3423	False	NA	NA
PB.9146.12	chr5	+	4396	26	novel_not_in_catalog	MARCH6	novel	3062	25	NA	NA	-7	-9	intron_retention	FALSE	canonical	1	7607	junction_18	289513.02784696926	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	8	1054	45.0	0	True	ATTAAA	-15
PB.9146.11	chr5	+	3520	26	full-splice_match	MARCH6	ENST00000274140.9	9569	26	-50	6099	1	4	multi-exon	FALSE	canonical	1	374436	junction_1	189331.73630077342	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	183	2915	15.0	1	True	NA	NA
PB.5330.5	chr17	-	1836	6	full-splice_match	ARHGDIA	ENST00000269321.11	1906	6	69	1	0	-1	multi-exon	FALSE	canonical	1	3248680	junction_5	603352.3406950205	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	68	682	5.0	-1	True	AATAAA	-13
PB.8904.6	chr4	-	3808	8	full-splice_match	UBE2D3	ENST00000394801.8	2368	8	146	-1586	10	0	multi-exon	FALSE	canonical	1	151175	junction_6	393001.72078711394	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	340	783	30.0	-40	True	ATTAAA	-11
PB.8904.7	chr4	-	2580	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	249	1161	3	432	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	266	709	15.0	-13	True	NA	NA
PB.8904.4	chr4	-	3738	8	full-splice_match	UBE2D3	ENST00000394803.9	2227	8	79	-1590	-16	0	multi-exon	FALSE	canonical	1	151175	junction_6	406515.0073236998	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	266	709	15.0	103	False	ATTAAA	-15
PB.9146.14	chr5	+	5618	24	incomplete-splice_match	MARCH6	ENST00000511802.5	4734	25	24081	-1085	-9129	1085	5prime_fragment	FALSE	canonical	1	637649	junction_2	163545.99782412083	NA	2	NA	TRUE	NA	NA	NA	C	coding	608	1827	2106	3932	75.0	3667	False	NA	NA
PB.5414.7	chr18	-	2294	4	incomplete-splice_match	ESCO1	ENST00000269214.9	4523	12	1	44206	1	19556	3prime_fragment	FALSE	canonical	1	60717	junction_3	36131.61408271463	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1353	941	2293	70.0	0	True	AATATA	-14
PB.5414.6	chr18	-	2695	7	incomplete-splice_match	ESCO1	ENST00000269214.9	4523	12	24	34962	-8	28800	3prime_fragment	FALSE	canonical	1	60717	junction_6	33646.649143050716	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1776	918	2693	60.0	306	False	NA	NA
PB.5414.5	chr18	-	4627	12	novel_not_in_catalog	ESCO1	novel	4523	12	NA	NA	51	1	any annotated donor/acceptor	FALSE	canonical	1	6455	junction_11	54499.50036377239	NA	5	NA	TRUE	NA	NA	NA	C	coding	839	2520	1067	3586	40.0	50	True	AATAAA	-33
PB.5414.4	chr18	-	4389	11	novel_in_catalog	ESCO1	novel	4523	12	NA	NA	0	10	no_combination_of_known_junctions	FALSE	canonical	1	8764	junction_3	56412.78104082443	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	910	3339	40.0	-1	True	AATAAA	-42
PB.7127.18	chr20	-	2737	14	full-splice_match	CSNK2A1	ENST00000645910.1	4290	14	8	1545	-1	16	multi-exon	FALSE	canonical	1	76	junction_12	93686.91626448129	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	704	1471	25.0	7	True	AATAAA	-20
PB.5414.2	chr18	-	4487	12	full-splice_match	ESCO1	ENST00000269214.9	4523	12	-1	37	-1	-8	multi-exon	FALSE	canonical	1	38215	junction_1	45443.93382423541	NA	1	NA	TRUE	NA	NA	NA	C	coding	839	2520	943	3462	25.0	-2	True	AATAAA	-17
PB.5414.1	chr18	-	4720	12	full-splice_match	ESCO1	ENST00000269214.9	4523	12	42	-239	10	239	multi-exon	TRUE	canonical	1	38215	junction_1	45443.93382423541	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	900	3419	25.0	9	True	AATAAA	-29
PB.11248.1	chr8	+	2770	2	full-splice_match	PLEKHF2	ENST00000315367.3	2881	2	111	0	111	0	multi-exon	FALSE	canonical	1	120310	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	131	880	15.0	0	True	AATAAA	-17
PB.7127.14	chr20	-	3814	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	73	9025	-3	100	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	201	1376	75.0	-4	True	TTTAAA	-41
PB.7127.16	chr20	-	2715	14	novel_not_in_catalog	CSNK2A1	novel	12912	13	NA	NA	1	21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	93872.62480087535	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	677	1444	25.0	9	True	AATAAA	-25
PB.7127.17	chr20	-	2490	12	full-splice_match	CSNK2A1	ENST00000349736.10	4047	12	-24	1581	0	20	multi-exon	FALSE	canonical	1	83	junction_6	80916.24021437077	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	453	1220	20.0	0	True	AATAAA	-24
PB.7127.10	chr20	-	4056	12	full-splice_match	CSNK2A1	ENST00000349736.10	4047	12	2	-11	0	11	multi-exon	FALSE	canonical	1	83	junction_6	80916.24021437077	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	427	1194	25.0	-1	True	AATAAA	-28
PB.7127.11	chr20	-	4358	14	novel_in_catalog	CSNK2A1	novel	12912	13	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	79005.65191316916	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	341	1516	45.0	27	True	AATAAA	-8
PB.5414.9	chr18	-	1334	4	novel_not_in_catalog	ESCO1	novel	4523	12	NA	NA	73	18492	any annotated donor/acceptor	FALSE	canonical	1	6455	junction_3	59665.79662494157	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	387	False	AATAAA	-39
PB.5414.8	chr18	-	1458	4	incomplete-splice_match	ESCO1	ENST00000269214.9	4523	12	-19	45062	-19	18700	3prime_fragment	FALSE	canonical	1	60717	junction_3	36131.61408271463	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	498	961	1458	70.0	263	False	AGTAAA	-4
PB.6538.1	chr2	-	4263	6	full-splice_match	TGFA	ENST00000295400.10	4310	6	39	8	-3	-8	multi-exon	FALSE	canonical	1	45049	junction_4	13248.066838599509	NA	2	NA	TRUE	NA	NA	NA	A	coding	160	483	210	692	35.0	201	False	AATGAA	-12
PB.12389.1	chrY	-	2352	4	novel_not_in_catalog	OFD1P5Y	novel	2590	16	NA	NA	13900	-28863	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	6.128258770283412	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-15
PB.9555.1	chr5	+	4873	1	incomplete-splice_match	PPARGC1B	ENST00000309241.9	10568	12	119838	1	4506	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	126	381	3616	3996	10.0	8005	False	AATAAA	-45
PB.2137.2	chr11	+	2762	3	full-splice_match	NADSYN1	ENST00000534634.5	963	3	87	-1886	-13	-5	multi-exon	FALSE	canonical	1	270654	junction_1	62074.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	88	267	102	368	40.0	-35	True	AATAAA	-26
PB.2137.3	chr11	+	3671	20	incomplete-splice_match	NADSYN1	ENST00000319023.6	2773	21	92	1783	-8	-2	3prime_fragment	FALSE	canonical	1	264027	junction_9	140227.23248425714	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	97	2223	60.0	-30	True	NA	NA
PB.2137.1	chr11	+	2382	20	incomplete-splice_match	NADSYN1	ENST00000319023.6	2773	21	77	3087	-23	1	3prime_fragment	FALSE	canonical	1	264027	junction_9	140227.23248425714	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	112	2238	30.0	1	True	TTTAAA	-42
PB.2137.4	chr11	+	4195	21	novel_in_catalog	NADSYN1	novel	963	3	NA	NA	0	-6	intron_retention	FALSE	canonical	1	167732	junction_10	145879.19346324718	NA	4	NA	TRUE	NA	NA	NA	C	coding	335	1008	3007	4014	50.0	-22	True	AATAAA	-11
PB.2137.5	chr11	+	2387	21	full-splice_match	NADSYN1	ENST00000319023.6	2773	21	104	282	2	-5	multi-exon	FALSE	canonical	1	264027	junction_9	137669.78541408424	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	85	2205	45.0	-18	True	AATAAA	-12
PB.6787.11	chr2	-	2685	7	novel_in_catalog	NR4A2	novel	3472	8	NA	NA	-1	0	intron_retention	FALSE	canonical	1	6529	junction_6	88966.25067218843	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	245	2041	85.0	-38	True	AATAAA	-33
PB.6787.10	chr2	-	2757	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	-24	0	intron_retention	FALSE	canonical	1	27330	junction_3	82839.23360463978	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	392	2113	85.0	9793	False	AATAAA	-33
PB.6787.13	chr2	-	2631	8	full-splice_match	NR4A2	ENST00000426264.5	2642	8	-7	18	-1	0	multi-exon	FALSE	canonical	1	23804	junction_6	84758.92650960856	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	380	1987	85.0	-38	True	AATAAA	-33
PB.6787.12	chr2	-	2662	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	31	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	90584.56212009747	NA	4	1	TRUE	NA	NA	NA	C	coding	454	1365	330	1694	85.0	1	True	AATAAA	-33
PB.1755.1	chr11	+	1381	9	full-splice_match	TSPAN4	ENST00000397397.6	1423	9	40	2	24	0	multi-exon	FALSE	canonical	1	236981	junction_1	238179.07818957226	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	186	902	15.0	-4	True	AATAAA	-12
PB.6787.14	chr2	-	2613	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	27330	junction_3	91034.72646036943	NA	2	1	TRUE	NA	NA	NA	C	coding	430	1293	369	1661	85.0	-38	True	AATAAA	-33
PB.1755.3	chr11	+	1276	8	full-splice_match	TSPAN4	ENST00000525201.5	834	8	-9	-433	-9	0	multi-exon	FALSE	canonical	1	27442	junction_2	366859.6623478237	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	273	797	15.0	-3	True	AATAAA	-12
PB.1755.2	chr11	+	1461	9	novel_not_in_catalog	TSPAN4	novel	1423	9	NA	NA	-43	0	any annotated donor/acceptor	FALSE	canonical	1	65128	junction_1	283337.8241181364	NA	1	1	TRUE	NA	NA	NA	C	coding	238	717	266	982	15.0	-6958	False	AATAAA	-12
PB.2703.1	chr12	-	1981	14	full-splice_match	DCTN2	ENST00000548249.5	2061	14	132	-52	-6	52	multi-exon	FALSE	canonical	1	1014048	junction_12	241463.38361220655	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	137	1342	25.0	-23	True	ATTAAA	-6
PB.11497.10	chr9	-	1951	8	full-splice_match	APTX	ENST00000379819.5	1820	8	-4	-127	-1	-4	multi-exon	FALSE	canonical	1	92128	junction_7	126334.22303718087	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	5	1075	35.0	19	True	AATAAA	-8
PB.2703.3	chr12	-	1832	14	novel_not_in_catalog	DCTN2	novel	2061	14	NA	NA	-3	-83	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	469703.84809293784	NA	2	1	TRUE	NA	NA	NA	C	coding	314	945	384	1328	70.0	-1	True	TTTAAA	-19
PB.2703.2	chr12	-	1880	14	full-splice_match	DCTN2	ENST00000548249.5	2061	14	131	50	6	-50	multi-exon	FALSE	canonical	1	1014048	junction_12	241463.38361220655	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	138	1343	40.0	-24	True	AATAAA	-19
PB.2703.5	chr12	-	2463	1	novel_in_catalog	DCTN2	novel	2061	14	NA	NA	4	1309	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	66	201	119	319	60.0	-5	True	NA	NA
PB.2703.4	chr12	-	1705	14	full-splice_match	DCTN2	ENST00000548249.5	2061	14	147	209	1	0	multi-exon	FALSE	canonical	1	1014048	junction_12	241463.38361220655	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	122	1327	0.0	-8	True	ATTAAA	-16
PB.11446.1	chr9	-	4292	1	novel_in_catalog	KIAA2026	novel	6988	8	NA	NA	-2217	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	B	coding	1206	3621	11	3631	25.0	NA	False	AATAAA	-13
PB.11497.11	chr9	-	1937	8	novel_in_catalog	APTX	novel	2023	8	NA	NA	26	-4	combination_of_known_junctions	FALSE	canonical	1	16399	junction_7	161320.97587968997	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	570	1061	35.0	-41	True	AATAAA	-8
PB.1074.5	chr1	+	3241	22	full-splice_match	IKBKE	ENST00000581977.6	3221	22	-19	-1	0	1	multi-exon	FALSE	canonical	1	76742	junction_15	25075.87656902975	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	346	2496	0.0	0	True	AATAAA	-21
PB.7602.14	chr22	-	3631	8	novel_not_in_catalog	DGCR2	novel	4361	9	NA	NA	-20	2218	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	201075.9774198473	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	222	1067	15.0	-16	True	NA	NA
PB.1074.1	chr1	+	3969	20	novel_in_catalog	IKBKE	novel	1595	8	NA	NA	-43	-1	combination_of_known_junctions	FALSE	canonical	1	76742	junction_15	25337.58953831616	NA	1	NA	TRUE	NA	NA	NA	C	coding	651	1956	389	2344	0.0	-43	False	AATAAA	-19
PB.1074.3	chr1	+	3223	22	novel_not_in_catalog	IKBKE	novel	1595	8	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	11976	junction_15	32643.50213957607	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	347	2011	0.0	-1	True	AATAAA	-19
PB.7602.15	chr22	-	3385	7	novel_in_catalog	DGCR2	novel	4361	9	NA	NA	-15	2107	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_4	167923.61506492237	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	884	1300	70.0	-11	True	NA	NA
PB.2612.6	chr12	-	2183	14	novel_in_catalog	TFCP2	novel	3546	15	NA	NA	35	44	no_combination_of_known_junctions	FALSE	canonical	1	3519	junction_13	104920.43234987743	NA	74	2	TRUE	NA	NA	NA	C	coding	404	1215	567	1781	30.0	288	False	TATAAA	-20
PB.2612.7	chr12	-	2231	14	novel_in_catalog	TFCP2	novel	3546	15	NA	NA	-1	44	no_combination_of_known_junctions	FALSE	canonical	1	6269	junction_6	121924.6410947469	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	373	1398	30.0	-4	True	TATAAA	-20
PB.2612.4	chr12	-	3105	15	full-splice_match	TFCP2	ENST00000257915.9	3546	15	27	414	27	-414	multi-exon	FALSE	canonical	1	272168	junction_14	50459.11792471006	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	550	1941	45.0	280	False	AATAGA	-9
PB.2612.5	chr12	-	2270	15	full-splice_match	TFCP2	ENST00000257915.9	3546	15	100	1176	12	44	multi-exon	FALSE	canonical	1	272168	junction_14	50459.11792471006	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	360	1868	30.0	9	True	TATAAA	-20
PB.2612.2	chr12	-	3189	12	incomplete-splice_match	TFCP2	ENST00000549867.5	1727	13	280	-1124	27	-96	5prime_fragment	FALSE	canonical	1	9301	junction_4	109575.32713613834	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	550	1707	25.0	280	False	ATTAAA	-20
PB.10924.1	chr7	+	1975	3	full-splice_match	GIMAP4	ENST00000255945.3	2060	3	82	3	-10	-3	multi-exon	FALSE	canonical	1	228180	junction_2	5140.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	94	1083	35.0	-11	True	AATAAA	-17
PB.2612.1	chr12	-	2934	15	full-splice_match	TFCP2	ENST00000257915.9	3546	15	516	96	428	-96	multi-exon	TRUE	canonical	1	272168	junction_14	50459.11792471006	NA	7	1	TRUE	NA	NA	NA	C	coding	463	1392	61	1452	25.0	769	False	ATTAAA	-20
PB.4120.2	chr16	-	2972	18	full-splice_match	RHBDF1	ENST00000262316.10	2992	18	19	1	9	-1	multi-exon	FALSE	canonical	1	2149	junction_17	68085.16049187336	NA	3	NA	TRUE	NA	NA	NA	C	coding	855	2568	125	2692	15.0	16	False	AATAAA	-34
PB.2612.8	chr12	-	2008	15	novel_in_catalog	TFCP2	novel	3546	15	NA	NA	-30	43	combination_of_known_junctions	FALSE	canonical	1	2414	junction_14	122997.1668575321	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	396	1607	30.0	-1	True	TATAAA	-19
PB.3273.6	chr13	+	2857	12	novel_in_catalog	TMCO3	novel	3050	13	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	1	14426	junction_8	146473.98541850413	NA	6	NA	TRUE	NA	NA	NA	C	coding	497	1494	331	1824	20.0	-80	True	ATTAAA	-14
PB.3273.7	chr13	+	4234	9	novel_not_in_catalog	TMCO3	novel	3050	13	NA	NA	-15	-4665	any annotated donor/acceptor	FALSE	canonical	1	1602	junction_8	174301.55531932117	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	327	1700	25.0	-76	True	AATAAA	-15
PB.3273.4	chr13	+	2937	9	full-splice_match	TMCO3	ENST00000474393.5	2843	9	-89	-5	12	5	multi-exon	FALSE	canonical	1	310500	junction_1	91930.98574669682	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	348	1922	20.0	-2622	False	AATAAA	-20
PB.3273.5	chr13	+	3856	6	incomplete-splice_match	TMCO3	ENST00000474393.5	2843	9	-74	29212	-21	12	3prime_fragment	FALSE	canonical	1	310500	junction_1	105550.7061361505	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	333	1403	35.0	-82	True	ATTAAA	-27
PB.3273.2	chr13	+	2964	12	novel_in_catalog	TMCO3	novel	3050	13	NA	NA	-9	-1	no_combination_of_known_junctions	FALSE	canonical	1	62722	junction_10	137912.58736635552	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	321	2288	20.0	-70	True	ATTAAA	-15
PB.3273.3	chr13	+	3554	6	incomplete-splice_match	TMCO3	ENST00000474393.5	2843	9	-101	29541	0	-317	3prime_fragment	FALSE	canonical	1	310500	junction_1	105550.7061361505	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	360	1430	20.0	-2634	False	AATAAA	-11
PB.2400.8	chr12	+	6341	4	novel_in_catalog	AC008012.1	novel	3435	12	NA	NA	0	-100140	no_combination_of_known_junctions	FALSE	canonical	1	5784	junction_3	239129.15135689054	NA	10	NA	TRUE	NA	NA	NA	B	coding	200	603	280	882	20.0	0	True	AATAAA	-14
PB.11156.14	chr8	+	3679	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	68	1416	0	-1075	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	258	2015	25.0	-22	True	AATAAA	-22
PB.11156.15	chr8	+	4875	4	full-splice_match	YTHDF3	ENST00000617200.1	5076	4	69	132	1	-132	multi-exon	FALSE	canonical	1	7434	junction_2	203616.78614549985	NA	4	2	TRUE	NA	NA	NA	C	coding	534	1605	324	1928	10.0	-21	True	NA	NA
PB.6262.1	chr19	-	3344	6	full-splice_match	ZNF418	ENST00000396147.5	3694	6	-29	379	-8	-2	multi-exon	FALSE	canonical	1	8288	junction_4	6592.382161252486	NA	0	NA	TRUE	NA	NA	NA	A	coding	676	2031	322	2352	25.0	0	True	NA	NA
PB.11156.17	chr8	+	5053	6	full-splice_match	YTHDF3	ENST00000621413.4	2370	6	-37	-2646	3	156	multi-exon	FALSE	canonical	1	18908	junction_2	189854.97158304811	NA	2	NA	TRUE	NA	NA	NA	C	coding	588	1767	392	2158	40.0	-19	True	ATTAAA	-12
PB.11156.10	chr8	+	4709	4	full-splice_match	YTHDF3	ENST00000617200.1	5076	4	51	316	-17	24	multi-exon	FALSE	canonical	1	7434	junction_2	203616.78614549985	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	342	1946	25.0	-39	True	AATAAA	-31
PB.11156.11	chr8	+	5143	6	full-splice_match	YTHDF3	ENST00000615676.1	5092	6	-51	0	-17	0	multi-exon	FALSE	canonical	1	452	junction_2	198643.59485913458	NA	9	NA	TRUE	NA	NA	NA	C	coding	534	1605	459	2063	10.0	-39	True	AATAAA	-14
PB.3273.8	chr13	+	2802	12	novel_in_catalog	TMCO3	novel	3050	13	NA	NA	6	-2	no_combination_of_known_junctions	FALSE	canonical	1	14641	junction_3	131716.3577280381	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	306	2147	50.0	-55	True	AATAAA	-22
PB.3273.9	chr13	+	2935	13	novel_not_in_catalog	TMCO3	novel	3050	13	NA	NA	6	2	any annotated donor/acceptor	FALSE	canonical	1	9894	junction_12	144124.21066990177	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	306	2276	50.0	-55	True	AATAAA	-26
PB.4129.4	chr16	+	2196	9	novel_not_in_catalog	NME4	novel	1111	11	NA	NA	3535	2075	intron_retention	FALSE	canonical	1	1462	junction_8	89728.2403356623	NA	0	NA	TRUE	NA	NA	NA	B	coding	199	600	1039	1638	60.0	0	True	AATAAA	-21
PB.4129.1	chr16	+	1579	9	full-splice_match	DECR2	ENST00000219481.9	1615	9	34	2	2	-2	multi-exon	FALSE	canonical	1	109852	junction_3	92795.84626075673	NA	0	NA	TRUE	NA	NA	NA	A	coding	292	879	105	983	10.0	-25	True	ATTAAA	-19
PB.10113.14	chr6	-	2577	15	novel_in_catalog	MAP3K7	novel	4633	16	NA	NA	-22	-99	no_combination_of_known_junctions	FALSE	canonical	1	4824	junction_13	133430.6991366756	NA	2	1	TRUE	NA	NA	NA	C	coding	557	1674	185	1858	10.0	-1	True	AGTAAA	-15
PB.4129.3	chr16	+	1695	9	novel_in_catalog	NME4	novel	1111	11	NA	NA	3534	2118	intron_retention	FALSE	canonical	1	2020	junction_2	111765.41145233338	NA	1	1	TRUE	NA	NA	NA	B	coding	283	852	248	1099	10.0	-1	True	ATTAAA	-19
PB.4129.2	chr16	+	2474	8	novel_in_catalog	NME4	novel	1111	11	NA	NA	3467	2003	intron_retention	FALSE	canonical	1	112434	junction_1	92560.69131182226	NA	0	NA	TRUE	NA	NA	NA	B	coding	199	600	1394	1993	15.0	-8	True	CATAAA	-14
PB.6502.2	chr2	+	1787	7	novel_in_catalog	AC012368.1	novel	552	6	NA	NA	33	-4	intron_retention	FALSE	canonical	1	7036	junction_3	35351.016062719704	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	NA	NA
PB.3568.4	chr14	-	1903	2	incomplete-splice_match	MLH3	ENST00000380968.6	7819	12	53	34147	-12	1253	3prime_fragment	FALSE	canonical	1	34703	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1740	164	1903	75.0	-13	True	NA	NA
PB.8954.17	chr4	-	2290	16	incomplete-splice_match	SEC24D	ENST00000419654.6	2786	20	26	4437	-7	-2885	3prime_fragment	FALSE	canonical	1	188245	junction_15	69466.4257730948	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2043	247	2289	50.0	-24	True	NA	NA
PB.8954.16	chr4	-	3718	23	full-splice_match	SEC24D	ENST00000280551.10	4030	23	6	306	6	-105	multi-exon	FALSE	canonical	1	188245	junction_22	92712.89816092883	NA	1	NA	TRUE	NA	NA	NA	C	coding	1032	3099	234	3332	50.0	-11	True	AAAAAG	-33
PB.3568.1	chr14	-	4769	14	novel_in_catalog	MLH3	novel	7896	13	NA	NA	-1	-185	combination_of_known_junctions	FALSE	canonical	1	30614	junction_1	44283.24406008674	NA	1	NA	TRUE	NA	NA	NA	C	coding	1453	4362	143	4504	35.0	8	True	NA	NA
PB.3568.3	chr14	-	4822	13	full-splice_match	MLH3	ENST00000355774.6	7896	13	53	3021	-12	1	multi-exon	FALSE	canonical	1	34703	junction_12	41220.50895581456	NA	0	NA	TRUE	NA	NA	NA	C	coding	1453	4362	164	4525	5.0	-13	True	GATAAA	-16
PB.3568.2	chr14	-	4729	12	full-splice_match	MLH3	ENST00000380968.6	7819	12	75	3015	0	2	multi-exon	FALSE	canonical	1	32021	junction_6	44423.42901522883	NA	1	NA	TRUE	NA	NA	NA	C	coding	1429	4290	142	4431	10.0	9	True	GATAAA	-17
PB.9077.2	chr4	+	2502	10	full-splice_match	NEIL3	ENST00000264596.3	2408	10	38	-132	-29	132	multi-exon	FALSE	canonical	1	68882	junction_2	17114.675094206345	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	81	1898	50.0	0	True	TATAAA	-11
PB.9077.3	chr4	+	2102	9	incomplete-splice_match	NEIL3	ENST00000264596.3	2408	10	12621	34	12554	-34	5prime_fragment	FALSE	canonical	1	68882	junction_1	16834.251467896487	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	99	1664	65.0	57	False	ATTAAA	-19
PB.172.29	chr1	-	3395	2	incomplete-splice_match	SRSF10	ENST00000492112.2	1631	6	-48	5236	-11	1670	3prime_fragment	FALSE	canonical	1	870544	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-14	True	AATGAA	-23
PB.9077.1	chr4	+	2346	10	full-splice_match	NEIL3	ENST00000264596.3	2408	10	35	27	-32	-27	multi-exon	FALSE	canonical	1	68882	junction_2	17114.675094206345	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	84	1901	45.0	-3	True	ATTAAA	-26
PB.1415.8	chr10	-	3278	1	novel_in_catalog	IPMK	novel	6133	6	NA	NA	16	-73124	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	131	396	1	396	30.0	-25	True	NA	NA
PB.1415.6	chr10	-	2861	6	novel_not_in_catalog	IPMK	novel	6133	6	NA	NA	16	-3265	any annotated donor/acceptor	FALSE	canonical	1	6242	junction_4	23896.752336667007	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	476	1567	20.0	-25	True	AATACA	-18
PB.1415.7	chr10	-	2763	6	full-splice_match	IPMK	ENST00000373935.3	6133	6	24	3346	24	-3346	multi-exon	FALSE	canonical	1	18605	junction_3	18694.464117486757	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	468	1550	60.0	-17	True	NA	NA
PB.1415.4	chr10	-	3656	6	full-splice_match	IPMK	ENST00000373935.3	6133	6	4	2473	4	-2473	multi-exon	FALSE	canonical	1	18605	junction_3	18694.464117486757	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	488	1570	15.0	-37	True	AATAAA	-17
PB.3092.10	chr13	+	3526	8	novel_in_catalog	USPL1	novel	1133	3	NA	NA	19	-1	no_combination_of_known_junctions	FALSE	canonical	1	4647	junction_4	58359.978600449285	NA	1	NA	TRUE	NA	NA	NA	C	coding	1053	3162	173	3334	5.0	2	True	ATTAAA	-14
PB.172.27	chr1	-	4323	6	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	321080	junction_4	251434.52601057003	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	3654	4157	25.0	-14	True	ATTAAA	-22
PB.1415.3	chr10	-	4087	6	full-splice_match	IPMK	ENST00000373935.3	6133	6	-4	2050	-4	-2050	multi-exon	FALSE	canonical	1	18605	junction_3	18694.464117486757	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	496	1578	40.0	-45	True	AATAAA	-13
PB.172.25	chr1	-	1625	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	341092.86760728376	NA	1	1	TRUE	NA	NA	NA	C	coding	208	627	236	862	80.0	-1	True	NA	NA
PB.1415.1	chr10	-	6118	6	full-splice_match	IPMK	ENST00000373935.3	6133	6	14	1	14	-1	multi-exon	FALSE	canonical	1	18605	junction_3	18694.464117486757	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	478	1560	30.0	-27	True	ATTAAA	-16
PB.7432.1	chr20	+	2955	3	novel_in_catalog	OPRL1	novel	3321	5	NA	NA	-62	-11	no_combination_of_known_junctions	FALSE	canonical	1	3897	junction_1	14379.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	289	870	253	1122	20.0	0	True	AATAAA	-21
PB.1749.2	chr11	+	1251	8	full-splice_match	TALDO1	ENST00000319006.7	1346	8	94	1	-5	-1	multi-exon	FALSE	canonical	1	2587424	junction_1	394969.3153310799	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	90	1073	10.0	-41	True	ATTAAA	-26
PB.1749.1	chr11	+	1582	7	novel_in_catalog	TALDO1	novel	1346	8	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	2587424	junction_1	416874.7285794885	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	90	1022	10.0	-41	True	ATTAAA	-14
PB.11307.2	chr8	-	3540	14	full-splice_match	RAD21	ENST00000297338.6	3749	14	208	1	-130	-1	multi-exon	FALSE	canonical	1	430119	junction_13	466275.78548679256	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	81	1976	20.0	-16	True	AATAAA	-18
PB.11307.3	chr8	-	3660	14	novel_in_catalog	RAD21	novel	3749	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	55919	junction_13	515931.05413081363	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	200	2095	25.0	390	False	AATAAA	-19
PB.5992.15	chr19	+	2662	19	incomplete-splice_match	SUPT5H	ENST00000598725.5	3742	29	20789	4	0	0	5prime_fragment	FALSE	canonical	1	590829	junction_2	202365.85368654455	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	50	2395	20.0	-7015	False	AATAAA	-18
PB.9069.11	chr4	+	2411	12	full-splice_match	GALNT7	ENST00000265000.8	4307	12	60	1836	2	120	multi-exon	FALSE	canonical	1	227341	junction_6	66964.01459103808	NA	1	1	TRUE	NA	NA	NA	C	coding	657	1974	24	1997	15.0	2	True	AAAAAG	-38
PB.8187.8	chr3	-	5532	25	novel_not_in_catalog	FAM208A	novel	5099	7	NA	NA	-28	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	99615.02339694182	NA	0	NA	TRUE	NA	NA	NA	B	coding	1471	4416	192	4607	35.0	-1	True	AATAAA	-14
PB.2223.10	chr11	+	2580	10	novel_in_catalog	C11orf54	novel	4094	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1500	junction_2	125908.47978767929	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	238	1185	30.0	1	True	AATAAA	-15
PB.11216.1	chr8	+	3862	7	full-splice_match	CA13	ENST00000321764.3	3815	7	-47	0	-47	0	multi-exon	TRUE	canonical	1	25826	junction_1	6057.565645996381	NA	2	NA	TRUE	NA	NA	NA	C	coding	262	789	350	1138	20.0	-35	True	AATAAA	-19
PB.11850.21	chr9	-	5406	16	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	66376	junction_7	333311.4529246716	NA	2	NA	TRUE	NA	NA	NA	C	coding	602	1809	246	2054	10.0	-1	True	AATAAA	-13
PB.3443.1	chr14	+	2324	1	antisense	novelGene_DDHD1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9483.35	chr5	+	2565	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-2	0	intron_retention	FALSE	canonical	1	98290	junction_1	1114549.8279520252	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	174	1541	65.0	-8	True	AAGAAA	-23
PB.6833.5	chr2	+	2143	16	full-splice_match	DYNC1I2	ENST00000340296.8	2589	16	60	386	-1	14	multi-exon	FALSE	canonical	1	295	junction_4	104902.86758660762	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	169	2007	35.0	0	True	ATTAAA	-43
PB.6833.4	chr2	+	3822	16	full-splice_match	DYNC1I2	ENST00000340296.8	2589	16	58	-1291	-3	1282	multi-exon	FALSE	canonical	1	295	junction_4	104902.86758660762	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	171	2009	20.0	-2	True	AATAAA	-17
PB.6833.3	chr2	+	4287	16	full-splice_match	DYNC1I2	ENST00000340296.8	2589	16	48	-1746	-13	1737	multi-exon	FALSE	canonical	1	295	junction_4	104902.86758660762	NA	2	NA	TRUE	NA	NA	NA	C	coding	612	1839	181	2019	30.0	-333	False	AATAAA	-15
PB.9069.10	chr4	+	6547	4	incomplete-splice_match	GALNT7	ENST00000512285.5	1567	6	-29	-2763	-29	2763	intron_retention	FALSE	canonical	1	238696	junction_2	26540.858514122458	NA	4	NA	TRUE	NA	NA	NA	C	coding	299	900	55	954	55.0	0	True	NA	NA
PB.6833.1	chr2	+	2464	16	full-splice_match	DYNC1I2	ENST00000340296.8	2589	16	131	-6	39	1	multi-exon	FALSE	canonical	1	295	junction_4	104902.86758660762	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	98	1936	25.0	-250	False	AATAAA	-23
PB.9483.34	chr5	+	3381	15	full-splice_match	MATR3	ENST00000618441.5	4018	15	-48	685	0	-1	multi-exon	FALSE	canonical	1	58261	junction_1	1068305.717375255	NA	2	NA	TRUE	NA	NA	NA	C	coding	847	2544	477	3020	70.0	-13	True	AAGAAA	-22
PB.11649.8	chr9	-	5140	7	full-splice_match	BICD2	ENST00000356884.10	6427	7	-37	1324	-37	-1324	multi-exon	FALSE	canonical	1	258441	junction_3	52144.914109357036	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	106	2673	70.0	-17	True	AAGAAA	-41
PB.6833.9	chr2	+	4235	16	full-splice_match	DYNC1I2	ENST00000409197.5	2572	16	83	-1746	0	1737	multi-exon	FALSE	canonical	1	295	junction_4	73533.61094610636	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	129	1967	30.0	0	True	AATAAA	-15
PB.6833.8	chr2	+	2565	17	full-splice_match	DYNC1I2	ENST00000409317.5	2196	17	37	-406	1	1	multi-exon	FALSE	canonical	1	298	junction_12	66505.44849860047	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	139	2037	25.0	-10	True	AATAAA	-23
PB.8252.4	chr3	-	2557	10	full-splice_match	RIOX2	ENST00000394198.6	2341	10	11	-227	11	227	multi-exon	FALSE	canonical	1	87743	junction_9	87634.62084102731	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	100	1497	75.0	-25	True	NA	NA
PB.8252.5	chr3	-	2670	12	novel_not_in_catalog	RIOX2	novel	5347	10	NA	NA	20	104	any annotated donor/acceptor	FALSE	canonical	1	1415	junction_6	147163.2652435961	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	91	933	35.0	-16	True	AATAAA	-21
PB.9483.36	chr5	+	4154	12	novel_in_catalog	MATR3	novel	3249	17	NA	NA	1	3	intron_retention	FALSE	canonical	1	98290	junction_1	1023769.4576233524	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	1483	3141	25.0	-5	True	AATAAA	-21
PB.3552.2	chr14	+	1545	12	full-splice_match	COQ6	ENST00000334571.6	2118	12	11	562	3	0	multi-exon	FALSE	canonical	1	153606	junction_1	51293.42411045695	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	30	1436	20.0	-6	True	AATAAA	-14
PB.8252.1	chr3	-	4865	10	full-splice_match	RIOX2	ENST00000394198.6	2341	10	10	-2534	10	1	multi-exon	FALSE	canonical	1	87743	junction_9	87634.62084102731	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	101	1498	25.0	-26	True	AATAAA	-18
PB.8252.2	chr3	-	4684	10	full-splice_match	RIOX2	ENST00000394198.6	2341	10	10	-2353	10	-180	multi-exon	FALSE	canonical	1	87743	junction_9	87634.62084102731	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	101	1498	30.0	-26	True	AATAAA	-19
PB.3552.1	chr14	+	2247	11	novel_in_catalog	COQ6	novel	1608	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	153606	junction_1	50884.87229973167	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	1336	2136	10.0	-13	True	AATAAA	-16
PB.9483.31	chr5	+	4587	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	80	176	-2	-176	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	3	NA	TRUE	NA	NA	NA	C	coding	847	2544	256	2799	40.0	-246	False	ATTAAA	-10
PB.4658.2	chr17	-	3496	12	novel_in_catalog	SMG6	novel	5960	19	NA	NA	15	0	no_combination_of_known_junctions	FALSE	canonical	1	2467	junction_11	63453.04312691485	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	319	1854	30.0	0	True	AATAAA	-13
PB.4658.3	chr17	-	3265	12	novel_not_in_catalog	SMG6	novel	5960	19	NA	NA	-14320	0	any annotated donor/acceptor	FALSE	canonical	1	426	junction_11	63964.293085289595	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	88	1623	30.0	NA	False	AATAAA	-13
PB.4658.1	chr17	-	6040	19	full-splice_match	SMG6	ENST00000263073.10	5960	19	-80	0	-80	0	multi-exon	TRUE	canonical	1	45099	junction_18	46613.59203081685	NA	1	NA	TRUE	NA	NA	NA	C	coding	1419	4260	132	4391	10.0	-1	True	AATAAA	-20
PB.6342.12	chr2	-	2688	6	full-splice_match	LDAH	ENST00000440866.6	3728	6	0	1040	0	0	multi-exon	FALSE	canonical	1	18162	junction_2	45196.591573259146	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	97	597	10.0	-30	False	AATAAA	-18
PB.6342.13	chr2	-	2922	7	novel_in_catalog	LDAH	novel	3663	5	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	11881	junction_5	50740.02266921273	NA	4	NA	TRUE	NA	NA	NA	C	coding	331	996	83	1078	10.0	-16	True	AATAAA	-13
PB.6342.10	chr2	-	2776	6	full-splice_match	LDAH	ENST00000626491.2	1179	6	-25	-1572	-4	1	multi-exon	FALSE	canonical	1	12019	junction_4	54249.94577177014	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	93	926	10.0	-26	False	AATAAA	-19
PB.6342.11	chr2	-	2901	7	full-splice_match	LDAH	ENST00000237822.7	2907	7	0	6	0	-6	multi-exon	FALSE	canonical	1	99451	junction_6	22146.691405765836	NA	46	NA	TRUE	NA	NA	NA	C	coding	325	978	81	1058	10.0	-14	True	AATAAA	-12
PB.6342.16	chr2	-	2510	5	novel_in_catalog	LDAH	novel	3663	5	NA	NA	0	-6	intron_retention	FALSE	canonical	1	13443	junction_4	62876.90625539714	NA	0	NA	TRUE	NA	NA	NA	C	coding	36	111	315	425	10.0	-14	True	AATAAA	-12
PB.9483.33	chr5	+	2747	14	full-splice_match	MATR3	ENST00000503811.5	2518	14	213	-442	-2	3	multi-exon	FALSE	canonical	1	94176	junction_1	1096331.4574188134	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	19	1698	10.0	-11	True	NA	NA
PB.6342.14	chr2	-	2760	6	full-splice_match	LDAH	ENST00000541941.5	3807	6	2	1045	2	-5	multi-exon	FALSE	canonical	1	13443	junction_5	54328.46783998238	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	329	916	10.0	-28	False	AATAAA	-13
PB.6342.15	chr2	-	2584	5	full-splice_match	LDAH	ENST00000619656.4	3663	5	34	1045	5	-5	multi-exon	FALSE	canonical	1	2629	junction_4	64270.31886882155	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	153	740	10.0	4	True	AATAAA	-13
PB.6717.2	chr2	-	2048	1	intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-47	False	ATTAAA	-15
PB.1101.6	chr1	+	2715	6	full-splice_match	HHAT	ENST00000367009.2	2714	6	0	-1	0	1	multi-exon	FALSE	canonical	1	2396	junction_1	20352.523240129223	NA	25	1	TRUE	NA	NA	NA	C	coding	166	501	297	797	35.0	-5	True	AATAAA	-23
PB.6342.18	chr2	-	2067	7	full-splice_match	LDAH	ENST00000237822.7	2907	7	-3	843	-3	728	multi-exon	FALSE	canonical	1	99451	junction_6	22146.691405765836	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	84	1061	25.0	-17	True	AGTAAA	-24
PB.9483.32	chr5	+	3684	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-2	4	intron_retention	FALSE	canonical	1	98290	junction_1	1126887.5396475259	NA	3	NA	TRUE	NA	NA	NA	C	coding	509	1530	1141	2670	25.0	-246	False	AATAAA	-22
PB.5636.1	chr19	-	7213	32	novel_in_catalog	PTPRS	novel	5443	31	NA	NA	-14	866	no_combination_of_known_junctions	TRUE	canonical	1	36329	junction_31	160136.35929159727	NA	8	NA	TRUE	NA	NA	NA	B	coding	1906	5721	221	5941	10.0	13	False	ATTAAA	-21
PB.9494.1	chr5	-	1300	4	full-splice_match	PFDN1	ENST00000261813.8	1352	4	29	23	-6	-23	multi-exon	FALSE	canonical	1	350176	junction_2	290091.94297134294	NA	0	NA	TRUE	NA	NA	NA	A	coding	122	369	20	388	25.0	-3	True	NA	NA
PB.5636.3	chr19	-	6058	28	novel_in_catalog	PTPRS	novel	5443	31	NA	NA	-48	863	intron_retention	FALSE	non_canonical	0	0	junction_13	171574.24464266872	NA	4	1	TRUE	NA	NA	NA	B	coding	877	2634	283	2916	10.0	10	False	ATTAAA	-18
PB.5636.2	chr19	-	7220	32	novel_in_catalog	PTPRS	novel	5443	31	NA	NA	-10	864	intron_retention	FALSE	non_canonical	0	0	junction_13	168324.71206219858	NA	6	1	TRUE	NA	NA	NA	B	coding	1286	3861	217	4077	10.0	17	False	ATTAAA	-19
PB.10338.35	chr6	-	7603	22	novel_in_catalog	THBS2	novel	5811	23	NA	NA	23	6	intron_retention	FALSE	canonical	1	28255	junction_21	118545.08136950471	NA	5	NA	TRUE	NA	NA	NA	C	coding	833	2502	228	2729	20.0	-176	False	AATAAA	-19
PB.5340.23	chr17	-	8338	43	full-splice_match	FASN	ENST00000306749.3	8565	43	99	128	-46	-121	multi-exon	FALSE	canonical	1	379200	junction_42	507142.746305311	NA	1	NA	TRUE	NA	NA	NA	C	coding	2511	7536	121	7656	25.0	1	True	AAGAAA	-14
PB.11317.1	chr8	+	4116	22	full-splice_match	MTBP	ENST00000305949.5	3059	22	-18	-1039	8	1039	multi-exon	FALSE	canonical	1	36275	junction_14	18740.378860181274	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	64	2778	10.0	-13	True	ATTAAA	-19
PB.11317.2	chr8	+	3079	22	full-splice_match	MTBP	ENST00000305949.5	3059	22	-18	-2	8	2	multi-exon	FALSE	canonical	1	36275	junction_14	18740.378860181274	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	64	2778	10.0	-13	True	AATAAA	-20
PB.6484.1	chr2	+	1932	1	full-splice_match	AC010733.2	ENST00000589496.2	5702	1	3768	2	3768	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-5151	False	AATAAA	-15
PB.10338.36	chr6	-	5768	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-8	3	intron_retention	FALSE	canonical	1	259346	junction_12	95269.62429382988	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	146	2158	20.0	-1	True	AATAAA	-16
PB.125.1	chr1	-	984	8	full-splice_match	SDHB	ENST00000375499.7	1153	8	129	40	-10	-10	multi-exon	FALSE	canonical	1	1320354	junction_2	425873.5892497794	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	23	865	50.0	-10	True	AATAAA	-7
PB.125.2	chr1	-	4649	7	novel_in_catalog	SDHB	novel	1153	8	NA	NA	-1	-10	intron_retention	FALSE	canonical	1	1320354	junction_2	451037.2697537496	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	14	637	50.0	-1	True	AATAAA	-7
PB.125.3	chr1	-	2953	5	incomplete-splice_match	SDHB	ENST00000375499.7	1153	8	59	6706	59	-1455	3prime_fragment	FALSE	canonical	1	1382979	junction_3	410133.13363284856	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	93	716	95.0	2	True	NA	NA
PB.662.1	chr1	-	1831	1	antisense	novelGene_SRGAP2C_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6707.1	chr2	+	1721	1	intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.1831.1	chr11	-	3343	22	full-splice_match	COPB1	ENST00000439561.6	3382	22	36	3	3	-3	multi-exon	FALSE	canonical	1	431700	junction_21	336135.9882879914	NA	34	NA	TRUE	NA	NA	NA	C	coding	953	2862	211	3072	35.0	-16	True	AATAAA	-14
PB.1831.2	chr11	-	3314	22	novel_in_catalog	COPB1	novel	510	2	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	148762	junction_21	370022.6464200606	NA	31	2	TRUE	NA	NA	NA	C	coding	953	2862	183	3044	30.0	-23	True	AATAAA	-13
PB.1831.3	chr11	-	3399	22	novel_in_catalog	COPB1	novel	510	2	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	46232	junction_21	383901.7722978833	NA	2	1	TRUE	NA	NA	NA	C	coding	953	2862	267	3128	35.0	-1	True	AATAAA	-14
PB.1831.4	chr11	-	3441	23	novel_not_in_catalog	COPB1	novel	510	2	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	153	junction_12	473459.77098005003	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	1735	3171	30.0	-19	True	AATAAA	-13
PB.1831.5	chr11	-	3789	21	incomplete-splice_match	COPB1	ENST00000439561.6	3382	22	311	3	82	-3	5prime_fragment	FALSE	canonical	1	604174	junction_20	298068.84836133075	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	657	3518	35.0	8975	False	AATAAA	-14
PB.11295.16	chr8	+	4367	14	full-splice_match	OXR1	ENST00000312046.10	4406	14	12	27	12	-12	multi-exon	FALSE	canonical	1	63576	junction_13	91942.40439381589	NA	1	NA	TRUE	NA	NA	NA	C	coding	839	2520	122	2641	70.0	10	True	ACTAAA	-24
PB.11993.2	chrX	-	4403	33	full-splice_match	PHKA2	ENST00000379942.4	5559	33	484	672	484	0	multi-exon	FALSE	canonical	1	99731	junction_4	47881.43725195078	NA	0	NA	TRUE	NA	NA	NA	C	coding	1235	3708	183	3890	10.0	-1	True	AATAGA	-21
PB.11295.18	chr8	+	1707	6	full-splice_match	OXR1	ENST00000449762.6	2621	6	96	818	1	0	multi-exon	FALSE	canonical	1	51991	junction_1	107745.3236936063	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	137	787	70.0	1	True	AATATA	-15
PB.227.11	chr1	+	2419	11	novel_not_in_catalog	RCC1	novel	2715	12	NA	NA	-4812	0	any annotated donor/acceptor	FALSE	canonical	1	2129	junction_1	359007.0562024652	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	73	1443	30.0	8840	False	AATAAA	-14
PB.11455.3	chr9	-	2075	1	novel_in_catalog	DMAC1	novel	2755	2	NA	NA	280	486	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	162	489	54	542	65.0	-10	True	AATAAA	-40
PB.6071.3	chr19	+	2209	21	full-splice_match	CLASRP	ENST00000221455.7	2234	21	25	0	0	0	multi-exon	FALSE	canonical	1	173822	junction_15	148872.9194573261	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	74	2098	10.0	9	True	AATAAA	-26
PB.11132.1	chr8	-	2513	10	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	5	0	any annotated donor/acceptor	TRUE	canonical	1	622	junction_7	89380.20123793263	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	202	816	30.0	5	True	AATAAA	-23
PB.9536.8	chr5	-	2160	2	full-splice_match	SPRY4	ENST00000434127.2	2379	2	-15	234	-15	-234	multi-exon	FALSE	canonical	1	100768	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	260	1159	35.0	-1	True	AATAAA	-27
PB.6071.2	chr19	+	2336	20	novel_in_catalog	CLASRP	novel	2234	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	162314	junction_14	140791.04648372845	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	83	1507	15.0	0	True	AATAAA	-25
PB.2830.8	chr12	+	2494	17	incomplete-splice_match	SCYL2	ENST00000360820.6	5779	18	-16	4322	-16	-2	3prime_fragment	FALSE	canonical	1	32232	junction_5	91444.34517909992	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2040	454	2493	70.0	-1	True	NA	NA
PB.2830.9	chr12	+	5567	18	full-splice_match	SCYL2	ENST00000360820.6	5779	18	1	211	1	-211	multi-exon	FALSE	canonical	1	32232	junction_5	90063.55593502236	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	437	3226	10.0	-8	True	TATAAA	-19
PB.9699.2	chr6	+	1769	5	novel_not_in_catalog	NQO2	novel	626	6	NA	NA	-36	-926	any annotated donor/acceptor	FALSE	canonical	1	59	junction_4	234316.68211525187	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	332	739	35.0	-38	True	AATAAA	-27
PB.2830.4	chr12	+	5759	18	full-splice_match	SCYL2	ENST00000360820.6	5779	18	19	1	19	-1	multi-exon	FALSE	canonical	1	32232	junction_5	90063.55593502236	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	419	3208	30.0	10	True	AATAAA	-26
PB.2830.5	chr12	+	5389	18	novel_in_catalog	SCYL2	novel	2328	17	NA	NA	-20	-14	combination_of_known_junctions	FALSE	canonical	1	32232	junction_5	90137.63730315519	NA	10	1	TRUE	NA	NA	NA	C	coding	929	2790	62	2851	40.0	-3799	False	AATAAA	-13
PB.1718.10	chr10	-	1846	5	novel_in_catalog	BNIP3	novel	2861	6	NA	NA	17	149	intron_retention	FALSE	canonical	1	116557	junction_1	148998.03204468003	NA	2	NA	TRUE	NA	NA	NA	C	coding	66	201	143	343	40.0	19	True	AATAAA	-20
PB.2830.7	chr12	+	4734	18	novel_in_catalog	SCYL2	novel	2328	17	NA	NA	9	-775	combination_of_known_junctions	FALSE	canonical	1	32232	junction_5	90137.63730315519	NA	2	NA	TRUE	NA	NA	NA	C	coding	929	2790	168	2957	35.0	-3905	False	AATAAA	-27
PB.9536.6	chr5	-	4951	3	full-splice_match	SPRY4	ENST00000344120.4	4938	3	-22	9	17	6	multi-exon	TRUE	canonical	1	8674	junction_2	381.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	322	969	210	1178	5.0	-3	True	NA	NA
PB.2830.1	chr12	+	3877	18	novel_in_catalog	SCYL2	novel	2328	17	NA	NA	0	-59	combination_of_known_junctions	FALSE	canonical	1	32232	junction_5	90137.63730315519	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	180	2969	20.0	11	True	ATTAAA	-15
PB.2830.2	chr12	+	5422	18	novel_in_catalog	SCYL2	novel	2328	17	NA	NA	8	-197	combination_of_known_junctions	FALSE	canonical	1	32232	junction_5	90137.63730315519	NA	2	NA	TRUE	NA	NA	NA	C	coding	929	2790	278	3067	5.0	7	True	TATAAA	-33
PB.2830.3	chr12	+	2308	17	full-splice_match	SCYL2	ENST00000549687.5	2328	17	37	-17	0	17	multi-exon	FALSE	canonical	1	32232	junction_5	91517.40315269277	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2058	249	2306	55.0	-20	True	NA	NA
PB.1856.1	chr11	+	1506	6	full-splice_match	HTATIP2	ENST00000419348.6	1477	6	-29	0	-9	0	multi-exon	FALSE	canonical	1	130400	junction_1	175510.0952328384	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	99	929	10.0	0	True	AATAAA	-26
PB.1856.3	chr11	+	1795	5	full-splice_match	HTATIP2	ENST00000451739.6	1748	5	-49	2	5	-1	multi-exon	FALSE	canonical	1	484060	junction_3	43918.34467722457	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	491	1219	10.0	34	True	AATAAA	-25
PB.1856.2	chr11	+	1385	6	full-splice_match	HTATIP2	ENST00000443524.6	967	6	-4	-414	-2	0	multi-exon	FALSE	canonical	1	37625	junction_1	211841.56372780108	NA	2	1	TRUE	NA	NA	NA	C	coding	242	729	80	808	10.0	7	True	AATAAA	-26
PB.730.1	chr1	-	2278	9	novel_in_catalog	CTSS	novel	4107	8	NA	NA	-5	118	combination_of_known_junctions	FALSE	canonical	1	454	junction_1	566196.7837288883	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	102	1097	45.0	-6	True	NA	NA
PB.10509.1	chr7	+	3002	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	367	-1	358	1	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	6	1	TRUE	NA	NA	NA	C	coding	323	972	86	1057	30.0	-3108	False	AATAAA	-16
PB.7712.1	chr22	+	3125	6	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-18	2	intron_retention	FALSE	non_canonical	0	0	junction_2	83474.66486449646	NA	10	3	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-62	True	ATTAAA	-20
PB.7712.2	chr22	+	3288	7	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	79966.26617448691	NA	3	1	TRUE	NA	NA	NA	B	coding	151	456	282	737	10.0	-58	True	ATTAAA	-23
PB.7712.3	chr22	+	2963	5	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_1	90306.34352683925	NA	2	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-58	True	ATTAAA	-18
PB.7712.4	chr22	+	3017	4	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-9	1	intron_retention	FALSE	non_canonical	0	0	junction_2	103589.49430108999	NA	3	1	TRUE	NA	NA	NA	B	coding	136	411	179	589	15.0	-53	True	ATTAAA	-19
PB.7712.5	chr22	+	2998	4	novel_in_catalog	RNF185	novel	563	5	NA	NA	-9	1	intron_retention	FALSE	canonical	1	31	junction_3	103241.64884494155	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-53	True	ATTAAA	-19
PB.7712.6	chr22	+	3437	9	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	31	junction_8	69192.71678243582	NA	7	NA	TRUE	NA	NA	NA	B	coding	192	579	428	1006	10.0	-48	True	ATTAAA	-22
PB.7712.7	chr22	+	3338	6	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	107855.51777187851	NA	2	1	TRUE	NA	NA	NA	B	coding	120	363	171	533	20.0	-45	True	ATTAAA	-17
PB.1300.3	chr10	+	2163	15	incomplete-splice_match	MCM10	ENST00000378714.7	4547	20	5	13416	5	2108	3prime_fragment	TRUE	canonical	1	80715	junction_1	33009.641080296526	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2040	124	2163	60.0	-20	True	AAAACA	-16
PB.1300.2	chr10	+	3751	20	full-splice_match	MCM10	ENST00000378714.7	4547	20	5	791	5	577	multi-exon	FALSE	canonical	1	80715	junction_1	39060.79694506219	NA	2	NA	TRUE	NA	NA	NA	C	coding	874	2625	124	2748	90.0	-20	True	NA	NA
PB.1300.1	chr10	+	3291	20	full-splice_match	MCM10	ENST00000378714.7	4547	20	5	1251	5	117	multi-exon	FALSE	canonical	1	80715	junction_1	39060.79694506219	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	124	2748	30.0	-20	True	AATAAA	-27
PB.1300.7	chr10	+	2605	15	novel_not_in_catalog	MCM10	novel	4547	20	NA	NA	22	2108	any annotated donor/acceptor	FALSE	canonical	1	765	junction_1	47451.477925468505	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2040	566	2605	60.0	22	False	AAAACA	-16
PB.1300.6	chr10	+	2392	17	incomplete-splice_match	MCM10	ENST00000378714.7	4547	20	16	9642	-9	-410	3prime_fragment	FALSE	canonical	1	80715	junction_1	34662.582195572846	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2280	113	2392	70.0	-9	True	NA	NA
PB.1300.5	chr10	+	3054	20	full-splice_match	MCM10	ENST00000378714.7	4547	20	6	1487	6	-119	multi-exon	FALSE	canonical	1	80715	junction_1	39060.79694506219	NA	1	NA	TRUE	NA	NA	NA	C	coding	874	2625	123	2747	20.0	-19	True	NA	NA
PB.1300.4	chr10	+	4546	20	full-splice_match	MCM10	ENST00000378714.7	4547	20	6	-5	6	5	multi-exon	FALSE	canonical	1	80715	junction_1	39060.79694506219	NA	2	NA	TRUE	NA	NA	NA	C	coding	874	2625	123	2747	20.0	-19	True	AATAAA	-18
PB.2806.3	chr12	+	1894	3	full-splice_match	SOCS2	ENST00000549122.5	2391	3	493	4	-46	-4	multi-exon	FALSE	canonical	1	40071	junction_1	108309.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	275	871	30.0	-6	True	AATAAA	-16
PB.2806.2	chr12	+	2038	3	full-splice_match	SOCS2	ENST00000536696.6	1065	3	32	-1005	32	-4	multi-exon	FALSE	canonical	1	47122	junction_1	104784.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	419	1015	30.0	-28	True	AATAAA	-16
PB.2806.1	chr12	+	2211	3	full-splice_match	SOCS2	ENST00000340600.6	2761	3	6	544	6	-5	multi-exon	FALSE	canonical	1	14252	junction_1	121219.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	593	1189	30.0	-4411	False	AATAAA	-15
PB.3396.7	chr14	-	3169	5	full-splice_match	TRAPPC6B	ENST00000347691.9	3229	5	57	3	-7	-3	multi-exon	FALSE	canonical	1	61555	junction_2	73219.39524256876	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	281	634	25.0	-4	True	AATAAA	-18
PB.2806.6	chr12	+	2130	3	full-splice_match	SOCS2	ENST00000622746.4	2881	3	210	541	-9	-3	multi-exon	FALSE	canonical	1	17439	junction_1	119625.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	510	1106	25.0	31	True	AATAAA	-17
PB.2806.5	chr12	+	2329	3	novel_in_catalog	SOCS2	novel	2761	3	NA	NA	-19	-3	intron_retention	FALSE	canonical	1	16483	junction_1	120103.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	709	1305	25.0	21	True	AATAAA	-17
PB.2806.4	chr12	+	3541	2	full-splice_match	SOCS2	ENST00000551556.1	1716	2	-928	-897	-2	-3	multi-exon	FALSE	canonical	1	256690	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	1921	2517	25.0	-3	True	AATAAA	-17
PB.7900.7	chr22	-	2498	10	novel_not_in_catalog	RABL2B	novel	1126	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	93918.57602686265	NA	1	1	TRUE	NA	NA	NA	C	coding	229	690	542	1231	45.0	-1	True	AGTAAA	-14
PB.7900.6	chr22	-	2646	9	incomplete-splice_match	RABL2B	ENST00000395595.7	2428	10	-7	3	-7	0	intron_retention	FALSE	canonical	1	210	junction_8	97337.74272980844	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	690	1379	45.0	-23	False	AGTAAA	-14
PB.7900.5	chr22	-	3337	8	incomplete-splice_match	RABL2B	ENST00000395595.7	2428	10	-11	3	-11	0	intron_retention	FALSE	canonical	1	557	junction_3	100539.56157997646	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	1381	2070	45.0	-27	False	AGTAAA	-14
PB.7900.4	chr22	-	2449	10	novel_in_catalog	RABL2B	novel	1126	10	NA	NA	6	-1	intron_retention	FALSE	canonical	1	56	junction_3	92973.35815419994	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	459	1175	25.0	-6	True	AGTAAA	-21
PB.7900.3	chr22	-	2548	8	novel_in_catalog	RABL2B	novel	1126	10	NA	NA	-11	0	intron_retention	FALSE	canonical	1	112	junction_7	100587.43816182608	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	232	669	25.0	-27	False	AGTAAA	-22
PB.3396.9	chr14	-	3273	6	novel_not_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	8	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	96385.00488436986	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	330	740	25.0	-53	True	AATAAA	-16
PB.7900.1	chr22	-	2176	9	full-splice_match	RABL2B	ENST00000354869.7	2140	9	-30	-6	8	3	multi-exon	FALSE	canonical	1	112	junction_8	97346.10494511003	NA	1	1	TRUE	NA	NA	NA	C	coding	229	690	209	898	20.0	-4	True	AGTAAA	-25
PB.3158.1	chr13	+	1604	6	full-splice_match	ITM2B	ENST00000647800.1	1823	6	-1	220	-1	-4	multi-exon	FALSE	canonical	1	4476693	junction_1	1417225.2516470908	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	157	957	10.0	-1	True	TATAAA	-20
PB.3158.2	chr13	+	1805	6	full-splice_match	ITM2B	ENST00000647800.1	1823	6	-30	48	18	-21	multi-exon	FALSE	canonical	1	4476693	junction_1	1417225.2516470908	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	186	986	30.0	-6	True	AATAAA	-20
PB.3158.3	chr13	+	2331	6	full-splice_match	ITM2B	ENST00000647800.1	1823	6	-41	-467	7	467	multi-exon	FALSE	canonical	1	4476693	junction_1	1417225.2516470908	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	197	997	25.0	7	True	AATAAA	-17
PB.3158.4	chr13	+	1147	6	full-splice_match	ITM2B	ENST00000647800.1	1823	6	-28	704	20	-1	multi-exon	FALSE	canonical	1	4476693	junction_1	1417225.2516470908	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	184	984	15.0	-4	True	ATTAAA	-15
PB.11730.1	chr9	-	2913	4	full-splice_match	ZFP37	ENST00000555206.5	2451	4	-37	-425	-37	425	multi-exon	FALSE	canonical	1	7024	junction_3	10365.32382513928	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	109	2004	35.0	-12	True	ATTAAA	-22
PB.5810.2	chr19	+	2628	6	full-splice_match	TMEM38A	ENST00000187762.6	2649	6	13	8	13	-8	multi-exon	FALSE	canonical	1	160621	junction_1	30317.76174720027	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	79	978	20.0	1	True	AATAAA	-13
PB.5810.1	chr19	+	1611	6	full-splice_match	TMEM38A	ENST00000187762.6	2649	6	12	1026	12	-3	multi-exon	FALSE	canonical	1	160621	junction_1	30317.76174720027	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	80	979	85.0	0	True	NA	NA
PB.1221.19	chr1	-	5051	20	full-splice_match	NID1	ENST00000264187.6	5864	20	-42	855	-42	-855	multi-exon	FALSE	canonical	1	165915	junction_9	94747.18815740167	NA	9	1	TRUE	NA	NA	NA	C	coding	1247	3744	126	3869	25.0	-3	True	ATTAAA	-15
PB.1824.8	chr11	+	3131	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	388	939	10	-939	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	76	1194	35.0	2	True	AATACA	-14
PB.1824.9	chr11	+	3007	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	405	1046	27	-1046	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	59	1177	20.0	19	True	CATAAA	-15
PB.1824.2	chr11	+	4102	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	346	10	-32	-10	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	118	1236	50.0	-40	True	ATTAAA	-21
PB.1824.3	chr11	+	3693	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	349	416	-29	-416	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	115	1233	85.0	-37	True	AATAAA	-26
PB.1824.1	chr11	+	3382	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	312	764	18	-764	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	152	1270	10.0	-74	False	TTTAAA	-17
PB.1824.6	chr11	+	3471	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	379	608	1	-608	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	85	1203	25.0	-7	True	TTTAAA	-21
PB.1824.7	chr11	+	2476	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	379	1603	1	-1603	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	85	1203	15.0	-7	True	NA	NA
PB.1824.4	chr11	+	3186	12	novel_in_catalog	PARVA	novel	4458	13	NA	NA	-12	-765	no_combination_of_known_junctions	FALSE	canonical	1	5030	junction_4	261902.05559046764	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	98	1075	10.0	-20	True	TTTAAA	-16
PB.1824.5	chr11	+	1884	13	full-splice_match	PARVA	ENST00000334956.13	4458	13	367	2207	-11	-2207	multi-exon	FALSE	canonical	1	56606	junction_7	216555.62656560607	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	97	1215	20.0	-19	True	NA	NA
PB.11512.2	chr9	-	6247	2	incomplete-splice_match	DCTN3	ENST00000378911.3	482	3	-33	-4124	-16	-1	intron_retention	FALSE	canonical	1	1608701	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-3	True	AATAAA	-17
PB.11512.3	chr9	-	4635	3	full-splice_match	DCTN3	ENST00000378911.3	482	3	-30	-4123	-13	-2	multi-exon	FALSE	canonical	1	867631	junction_2	370535.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	31	549	10.0	0	True	AATAAA	-16
PB.11512.1	chr9	-	3858	5	novel_in_catalog	DCTN3	novel	773	6	NA	NA	-13	-1	intron_retention	TRUE	canonical	1	867631	junction_4	277860.1030410807	NA	3	NA	TRUE	NA	NA	NA	C	coding	172	519	31	549	10.0	0	True	AATAAA	-17
PB.11512.4	chr9	-	2591	6	novel_in_catalog	DCTN3	novel	773	6	NA	NA	-10	1	intron_retention	FALSE	canonical	1	867631	junction_5	248554.55890729502	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	28	546	10.0	3	True	AATAAA	-14
PB.6034.4	chr19	-	2543	10	novel_in_catalog	LIPE	novel	3813	10	NA	NA	-372	23	combination_of_known_junctions	FALSE	canonical	1	48214	junction_9	96478.31446854447	NA	0	NA	TRUE	NA	NA	NA	B	coding	821	2466	59	2524	15.0	-10	True	ACTAAA	-19
PB.5455.1	chr18	-	4005	8	novel_not_in_catalog	TPGS2	novel	2679	2	NA	NA	9	-221	any annotated donor/acceptor	FALSE	canonical	1	2449	junction_1	407615.3325485854	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	236	1138	20.0	-1	True	NA	NA
PB.6034.1	chr19	-	2930	10	novel_in_catalog	LIPE	novel	3813	10	NA	NA	434	6	combination_of_known_junctions	FALSE	canonical	1	48214	junction_9	96478.31446854447	NA	11	1	TRUE	NA	NA	NA	B	coding	808	2427	193	2619	20.0	3730	False	AATAAA	-26
PB.6034.2	chr19	-	2856	10	novel_not_in_catalog	LIPE	novel	3813	10	NA	NA	-392	-8	any annotated donor/acceptor	FALSE	canonical	1	4640	junction_7	124220.37312964865	NA	1	NA	TRUE	NA	NA	NA	B	coding	813	2442	118	2559	25.0	-30	True	AATAAA	-12
PB.6034.3	chr19	-	2622	9	novel_in_catalog	LIPE	novel	3813	10	NA	NA	-402	-9	combination_of_known_junctions	FALSE	canonical	1	21395	junction_3	130374.66774166675	NA	0	NA	TRUE	NA	NA	NA	B	coding	732	2199	128	2326	20.0	3795	False	AATAAA	-11
PB.11145.6	chr8	+	7886	8	novel_in_catalog	SDCBP	novel	556	3	NA	NA	-3	0	intron_retention	FALSE	canonical	1	278688	junction_4	301213.8212210247	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	6039	6767	20.0	-10	True	AATAAA	-20
PB.2474.1	chr12	-	5087	6	full-splice_match	DUSP16	ENST00000228862.3	3402	6	-11	-1674	-11	-13	multi-exon	FALSE	canonical	1	13597	junction_3	113725.48483677702	NA	7	NA	TRUE	NA	NA	NA	C	coding	406	1221	1257	2477	55.0	508	False	AATAAA	-27
PB.7486.2	chr21	-	5239	23	novel_not_in_catalog	TIAM1	novel	7200	29	NA	NA	-67992	0	any annotated donor/acceptor	FALSE	canonical	1	138	junction_22	33962.888275809586	NA	19	2	TRUE	NA	NA	NA	B	coding	1016	3051	239	3289	5.0	NA	False	AATAAA	-15
PB.7486.3	chr21	-	7232	28	novel_in_catalog	TIAM1	novel	7200	29	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	37918	junction_27	29238.32005137456	NA	4	NA	TRUE	NA	NA	NA	B	coding	1591	4776	511	5286	10.0	22	False	AATAAA	-11
PB.7486.4	chr21	-	6988	27	novel_not_in_catalog	TIAM1	novel	7200	29	NA	NA	17705	16	any annotated donor/acceptor	FALSE	canonical	1	93	junction_26	32236.85097146142	NA	3	NA	TRUE	NA	NA	NA	B	coding	1591	4776	287	5062	75.0	NA	False	NA	NA
PB.403.7	chr1	-	3537	30	novel_in_catalog	NRDC	novel	1660	16	NA	NA	21	0	no_combination_of_known_junctions	FALSE	canonical	1	983	junction_20	394552.82641501084	NA	5	NA	TRUE	NA	NA	NA	C	coding	1125	3378	136	3513	45.0	-1	True	AATAAA	-24
PB.2474.6	chr12	-	5509	7	full-splice_match	DUSP16	ENST00000298573.8	5253	7	-302	46	-302	-46	multi-exon	FALSE	canonical	1	105501	junction_6	69202.7019655543	NA	2	NA	TRUE	NA	NA	NA	C	coding	665	1998	935	2932	60.0	-1	True	NA	NA
PB.2474.7	chr12	-	5290	8	novel_in_catalog	DUSP16	novel	5253	7	NA	NA	-67	-13	combination_of_known_junctions	FALSE	canonical	1	9516	junction_7	118532.88732031206	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	683	2680	55.0	1710	False	AATAAA	-27
PB.2474.8	chr12	-	5207	8	novel_in_catalog	DUSP16	novel	5253	7	NA	NA	11	-13	no_combination_of_known_junctions	FALSE	canonical	1	2662	junction_7	120074.9916734861	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	600	2597	55.0	-6	True	AATAAA	-27
PB.2474.9	chr12	-	5105	7	novel_in_catalog	DUSP16	novel	5253	7	NA	NA	-6	-13	combination_of_known_junctions	FALSE	canonical	1	8795	junction_6	102066.32245369784	NA	2	NA	TRUE	NA	NA	NA	C	coding	665	1998	498	2495	55.0	1771	False	AATAAA	-27
PB.3370.6	chr14	-	3407	13	incomplete-splice_match	HEATR5A	ENST00000543095.6	7840	36	32	78726	-19	1040	3prime_fragment	FALSE	canonical	1	59212	junction_7	28012.400071094504	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	154	2118	20.0	-1	True	NA	NA
PB.3370.1	chr14	-	7808	36	novel_not_in_catalog	HEATR5A	novel	7840	36	NA	NA	-19	3	any annotated donor/acceptor	FALSE	canonical	1	31558	junction_30	25709.87379786297	NA	1	NA	TRUE	NA	NA	NA	C	coding	2045	6138	154	6291	25.0	-1	True	AATAAA	-18
PB.3370.2	chr14	-	6949	36	novel_in_catalog	HEATR5A	novel	7840	36	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	12257	junction_28	29166.382829692186	NA	1	NA	TRUE	NA	NA	NA	C	coding	2030	6093	154	6246	90.0	-1	True	NA	NA
PB.1098.5	chr1	+	3093	12	full-splice_match	UTP25	ENST00000491415.6	8446	12	1	5352	1	-5352	multi-exon	FALSE	canonical	1	163794	junction_5	22441.84745308278	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	57	2327	45.0	13	True	AATAAA	-18
PB.1223.10	chr1	-	1878	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	-5	1932	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	3	1	TRUE	NA	NA	NA	B	coding	244	735	208	942	15.0	-33	False	AATGAA	-18
PB.5265.19	chr17	-	2132	18	full-splice_match	EXOC7	ENST00000332065.9	4596	18	-90	2554	-27	5	multi-exon	FALSE	canonical	1	414710	junction_12	153932.75863736522	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	94	2055	15.0	-32	True	GATAAA	-22
PB.5265.18	chr17	-	2208	19	full-splice_match	EXOC7	ENST00000589210.5	4751	19	-10	2553	-10	5	multi-exon	FALSE	canonical	1	110367	junction_12	235896.9030052321	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	77	2131	15.0	-15	True	GATAAA	-22
PB.9218.5	chr5	+	3739	6	novel_not_in_catalog	MRPS30	novel	1678	5	NA	NA	24	-1862	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	322649.7733701978	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	15	1334	5.0	0	True	AATGAA	-18
PB.5265.15	chr17	-	3292	18	full-splice_match	EXOC7	ENST00000332065.9	4596	18	-71	1375	-8	0	multi-exon	FALSE	canonical	1	414710	junction_12	153932.75863736522	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	75	2036	20.0	-13	True	NA	NA
PB.5265.14	chr17	-	3485	20	full-splice_match	EXOC7	ENST00000634349.1	2124	20	-95	-1266	-29	9	multi-exon	FALSE	canonical	1	101557	junction_13	261391.47432394684	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	96	2219	10.0	-34	True	NA	NA
PB.5265.17	chr17	-	2332	18	full-splice_match	EXOC7	ENST00000332065.9	4596	18	-76	2340	-13	162	multi-exon	FALSE	canonical	1	414710	junction_12	153932.75863736522	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	80	2041	5.0	-18	True	NA	NA
PB.5265.16	chr17	-	2880	18	full-splice_match	EXOC7	ENST00000332065.9	4596	18	-73	1789	-10	-414	multi-exon	FALSE	canonical	1	414710	junction_12	153932.75863736522	NA	1	NA	TRUE	NA	NA	NA	C	coding	653	1962	77	2038	20.0	-15	True	NA	NA
PB.5265.11	chr17	-	5351	16	novel_in_catalog	EXOC7	novel	353	2	NA	NA	-12	0	intron_retention	FALSE	canonical	1	414710	junction_10	157089.63521576536	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	79	1464	30.0	-17	True	AATAAA	-19
PB.5265.13	chr17	-	4379	18	full-splice_match	EXOC7	ENST00000332065.9	4596	18	-91	308	-28	-307	multi-exon	FALSE	canonical	1	414710	junction_12	153932.75863736522	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	95	2056	30.0	-33	True	CATAAA	-20
PB.5265.12	chr17	-	4686	18	novel_in_catalog	EXOC7	novel	353	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	21883	junction_8	283131.07157659455	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	65	2056	30.0	-3	True	AATAAA	-18
PB.3183.4	chr13	+	2336	7	novel_not_in_catalog	AL137058.2	novel	558	4	NA	NA	17361	1242	any annotated donor/acceptor	FALSE	canonical	1	8797	junction_4	39012.27326859245	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	1045	2007	65.0	-26	True	AATAAA	-8
PB.3183.5	chr13	+	2193	6	novel_not_in_catalog	AL137058.2	novel	558	4	NA	NA	17363	1242	any annotated donor/acceptor	FALSE	canonical	1	42658	junction_3	27216.862277639575	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	902	1864	65.0	-24	True	AATAAA	-8
PB.3183.6	chr13	+	2806	4	novel_not_in_catalog	AL137058.2	novel	558	4	NA	NA	17365	-10524	any annotated donor/acceptor	FALSE	canonical	1	19241	junction_3	42953.056103921954	NA	0	NA	TRUE	NA	NA	NA	B	coding	98	297	2	298	40.0	-22	True	ATTAAA	-23
PB.3183.1	chr13	+	2136	5	novel_not_in_catalog	AL137058.2	novel	558	4	NA	NA	17347	1242	any annotated donor/acceptor	FALSE	canonical	1	8108	junction_3	42024.6372084281	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	845	1807	65.0	1	True	AATAAA	-8
PB.3183.2	chr13	+	2197	5	novel_not_in_catalog	AL137058.2	novel	558	4	NA	NA	17348	-10523	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	49980.68985618346	NA	0	NA	TRUE	NA	NA	NA	B	coding	100	303	13	315	35.0	2	True	ATTAAA	-24
PB.3183.3	chr13	+	2379	7	novel_not_in_catalog	AL137058.2	novel	558	4	NA	NA	17351	1241	any annotated donor/acceptor	FALSE	canonical	1	2596	junction_4	45063.94009041179	NA	1	NA	TRUE	NA	NA	NA	B	coding	320	963	1089	2051	65.0	5	True	AATAAA	-7
PB.3346.3	chr14	-	3547	30	novel_not_in_catalog	IPO4	novel	3632	29	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	923	junction_17	148227.31847684056	NA	2	NA	TRUE	NA	NA	NA	C	coding	1101	3306	25	3330	40.0	-15	True	AATAAA	-22
PB.3346.2	chr14	-	3469	29	novel_in_catalog	IPO4	novel	3632	29	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	15390	junction_6	148026.51893389746	NA	2	NA	TRUE	NA	NA	NA	C	coding	1064	3195	54	3248	35.0	6846	False	AATAAA	-26
PB.2442.5	chr12	+	2694	12	full-splice_match	C1S	ENST00000328916.7	2972	12	275	3	46	0	multi-exon	FALSE	canonical	1	469066	junction_1	223556.7159436373	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	250	2316	25.0	-9776	False	AATAAA	-15
PB.2442.4	chr12	+	3215	11	novel_in_catalog	C1S	novel	3076	15	NA	NA	4	0	intron_retention	FALSE	canonical	1	163600	junction_1	312207.420306773	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	1644	2837	25.0	0	True	AATAAA	-15
PB.2442.3	chr12	+	5644	7	novel_in_catalog	C1S	novel	3076	15	NA	NA	0	0	intron_retention	TRUE	canonical	1	469066	junction_1	253213.7127504924	NA	3	NA	TRUE	NA	NA	NA	C	coding	296	891	4376	5266	25.0	-6	True	AATAAA	-15
PB.2442.2	chr12	+	2667	12	full-splice_match	C1S	ENST00000360817.9	2635	12	53	-85	4	-1	multi-exon	FALSE	canonical	1	163600	junction_1	298073.10027181735	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	224	2290	25.0	0	True	AATAAA	-14
PB.3346.5	chr14	-	3484	30	full-splice_match	IPO4	ENST00000354464.10	3646	30	155	7	2	0	multi-exon	FALSE	canonical	1	245842	junction_29	118093.67965829765	NA	0	NA	TRUE	NA	NA	NA	C	coding	1081	3246	23	3268	45.0	-13	True	AATAAA	-21
PB.3346.4	chr14	-	3577	29	novel_in_catalog	IPO4	novel	3632	29	NA	NA	0	0	intron_retention	FALSE	canonical	1	7083	junction_8	146262.20313569007	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	25	1962	45.0	-15	True	AATAAA	-21
PB.6632.1	chr2	+	2637	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	86	-1190	-23	-514	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	134	1153	40.0	-19	True	NA	NA
PB.6632.2	chr2	+	3032	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	88	-1587	-21	-117	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	132	1151	35.0	-17	True	NA	NA
PB.6632.3	chr2	+	3670	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	89	-2226	-20	522	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	131	1150	10.0	-16	True	NA	NA
PB.6632.4	chr2	+	3148	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	89	-1704	-20	0	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	131	1150	40.0	-16	True	NA	NA
PB.6632.5	chr2	+	1356	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	93	84	-16	-84	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	127	1146	35.0	-12	True	AGTAAA	-19
PB.6632.6	chr2	+	2901	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	93	-1461	-16	-243	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	127	1146	50.0	-12	True	NA	NA
PB.6632.7	chr2	+	2060	5	novel_in_catalog	CIAO1	novel	1533	7	NA	NA	-16	-88	intron_retention	FALSE	canonical	1	504384	junction_1	167276.57203341418	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	127	930	35.0	-12	True	AGTAAA	-15
PB.3301.16	chr14	-	2497	9	full-splice_match	HNRNPC	ENST00000554455.5	1784	9	-2	-711	-2	695	multi-exon	FALSE	canonical	1	233847	junction_6	851664.3440304017	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	193	1113	25.0	14	True	ATTAAA	-33
PB.3301.17	chr14	-	2400	9	full-splice_match	HNRNPC	ENST00000553300.5	1375	9	15	-1040	-2	637	multi-exon	FALSE	canonical	1	233847	junction_6	855594.4623457716	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	193	1074	35.0	14	True	NA	NA
PB.3301.14	chr14	-	2904	9	full-splice_match	HNRNPC	ENST00000554455.5	1784	9	-1	-1119	-1	-295	multi-exon	FALSE	canonical	1	233847	junction_6	851664.3440304017	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	192	1112	40.0	15	True	AATAAA	-14
PB.3301.15	chr14	-	2439	10	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	696	intron_retention	FALSE	canonical	0	0	junction_6	929050.6388723443	NA	5	2	TRUE	NA	NA	NA	C	coding	171	516	539	1054	20.0	18	True	ATTAAA	-34
PB.3301.12	chr14	-	2866	9	full-splice_match	HNRNPC	ENST00000553300.5	1375	9	15	-1506	-2	-295	multi-exon	FALSE	canonical	1	233847	junction_6	855594.4623457716	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	193	1074	40.0	14	True	AATAAA	-14
PB.3301.13	chr14	-	4114	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	-250	intron_retention	FALSE	canonical	1	213933	junction_7	572488.4158707929	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	1396	2277	20.0	14	True	AATAAA	-14
PB.3301.10	chr14	-	3231	10	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	-15	intron_retention	FALSE	canonical	1	17766	junction_8	703126.4275763264	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	278	1159	40.0	17	True	NA	NA
PB.3301.11	chr14	-	2889	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	-246	intron_retention	FALSE	canonical	1	120000	junction_7	600174.9202894851	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	167	1048	15.0	14	True	AATAAA	-18
PB.6880.1	chr2	+	1873	3	full-splice_match	ITGA4	ENST00000484404.1	592	3	-353	-928	-44	0	multi-exon	FALSE	canonical	1	372969	junction_1	38069.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	356	850	5.0	-26	True	AATAAA	-19
PB.6880.3	chr2	+	4384	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	404	-599	-84	599	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	87	3125	25.0	2	True	AATACA	-19
PB.6880.2	chr2	+	5299	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	441	-1551	-47	1551	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	50	3088	60.0	-9792	False	AATAAA	-8
PB.6880.5	chr2	+	1725	5	full-splice_match	ITGA4	ENST00000339307.8	1403	5	-322	0	-317	0	multi-exon	FALSE	canonical	1	3497	junction_4	168731.4577731432	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	831	1358	5.0	-9	True	AATAAA	-19
PB.6880.4	chr2	+	2010	16	full-splice_match	ITGA4	ENST00000233573.6	2070	16	32	28	32	-28	multi-exon	FALSE	canonical	1	236407	junction_5	78681.32564363668	NA	2	NA	TRUE	NA	NA	NA	C	coding	585	1755	256	2010	70.0	-9998	False	NA	NA
PB.3301.18	chr14	-	2426	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	689	intron_retention	FALSE	canonical	1	120000	junction_7	600174.9202894851	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	167	1048	25.0	14	True	ATTAAA	-27
PB.3301.19	chr14	-	3653	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1	688	intron_retention	FALSE	canonical	1	213933	junction_7	572488.4158707929	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	1395	2276	25.0	15	True	ATTAAA	-26
PB.8562.3	chr3	+	2844	21	novel_not_in_catalog	PSMD2	novel	3449	21	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	6329	junction_12	489546.73754979466	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2646	41	2686	10.0	-24	True	AATAAA	-14
PB.3975.8	chr15	+	2446	3	novel_not_in_catalog	ARID3B	novel	4271	9	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	11735.0	NA	1	1	TRUE	NA	NA	NA	C	coding	173	522	2	523	20.0	14	True	AATAAA	-18
PB.10487.2	chr7	+	4689	22	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	-23	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	213262.49124572062	NA	2	NA	TRUE	NA	NA	NA	B	coding	891	2676	245	2920	35.0	-79	False	AATAAA	-21
PB.9771.2	chr6	+	2678	1	intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-236	False	NA	NA
PB.2198.6	chr11	+	1542	5	incomplete-splice_match	PCF11	ENST00000530304.5	2649	8	12	2533	-4	2369	3prime_fragment	FALSE	canonical	1	127369	junction_1	50402.94105754147	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1257	286	1542	60.0	0	True	ATTAAA	-44
PB.2198.5	chr11	+	1733	1	full-splice_match	PCF11	ENST00000624931.1	1720	1	-33	20	0	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	75	228	314	541	65.0	-4	True	AATAAA	-39
PB.2198.4	chr11	+	5885	16	full-splice_match	PCF11	ENST00000298281.8	7677	16	139	1653	0	-1653	multi-exon	FALSE	canonical	1	127369	junction_1	112030.44627350192	NA	0	NA	TRUE	NA	NA	NA	C	coding	1555	4668	314	4981	10.0	-4	True	AATAAA	-21
PB.2198.3	chr11	+	6268	16	novel_in_catalog	PCF11	novel	7677	16	NA	NA	0	-1663	combination_of_known_junctions	FALSE	canonical	1	93807	junction_7	119040.70580350049	NA	0	NA	TRUE	NA	NA	NA	C	coding	1686	5061	314	5374	30.0	-4	True	AATAAA	-11
PB.2198.2	chr11	+	1340	5	incomplete-splice_match	PCF11	ENST00000530304.5	2649	8	-16	2763	0	2139	3prime_fragment	FALSE	canonical	1	127369	junction_1	50402.94105754147	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1026	314	1339	60.0	-4	True	AGTAAA	-35
PB.2198.1	chr11	+	5293	16	full-splice_match	PCF11	ENST00000298281.8	7677	16	137	2247	-2	2145	multi-exon	FALSE	canonical	1	127369	junction_1	112030.44627350192	NA	0	NA	TRUE	NA	NA	NA	C	coding	1555	4668	316	4983	30.0	-6	True	AATAAA	-17
PB.10652.2	chr7	+	2974	28	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	-8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	23861.981460319257	NA	1	NA	TRUE	NA	NA	NA	B	coding	775	2328	224	2551	45.0	-8	True	AATAAA	-22
PB.10652.3	chr7	+	3102	29	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	-1	9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	20177.219144415954	NA	2	NA	TRUE	NA	NA	NA	B	coding	775	2328	217	2544	50.0	-1	True	AATAAA	-33
PB.4108.9	chr15	-	2288	7	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	2	-98	any annotated donor/acceptor	FALSE	canonical	1	6489	junction_2	34075.43408869993	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	166	1452	50.0	1	True	AGTAAA	-39
PB.5557.1	chr19	+	6857	47	novel_not_in_catalog	ABCA7	novel	343	3	NA	NA	-6	-3	any annotated donor/acceptor	TRUE	canonical	1	16051	junction_44	52902.29161866824	NA	2	1	TRUE	NA	NA	NA	A	coding	1988	5967	240	6206	20.0	-9268	False	AATAAA	-27
PB.10652.7	chr7	+	4923	30	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	-25	1773	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_25	25947.256848773413	NA	5	NA	TRUE	NA	NA	NA	B	coding	775	2328	163	2490	35.0	53	True	AATAAA	-14
PB.10652.4	chr7	+	6611	29	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	23	-2590	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	20177.219144415954	NA	1	NA	TRUE	NA	NA	NA	B	coding	775	2328	193	2520	50.0	23	True	AATAAA	-10
PB.10456.1	chr7	-	4338	4	novel_in_catalog	HOXA3	novel	541	3	NA	NA	1602	-14626	no_combination_of_known_junctions	FALSE	canonical	1	3733	junction_3	36903.83493170685	NA	2	NA	TRUE	NA	NA	NA	B	coding	231	696	3362	4057	80.0	5695	False	NA	NA
PB.10487.6	chr7	+	4737	22	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	-2	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	206730.62725900701	NA	4	NA	TRUE	NA	NA	NA	B	coding	897	2694	224	2917	35.0	-2	True	AATAAA	-16
PB.10652.8	chr7	+	3034	10	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	-11776	1772	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	28953.26435933828	NA	5	NA	TRUE	NA	NA	NA	B	coding	115	348	366	713	35.0	NA	False	AATAAA	-13
PB.10487.7	chr7	+	4398	23	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	34	-208	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	178886.2008643939	NA	3	NA	TRUE	NA	NA	NA	B	coding	932	2799	173	2971	0.0	-7	True	NA	NA
PB.6208.6	chr19	+	5790	14	incomplete-splice_match	LENG8	ENST00000616932.4	2825	16	314	-185	11	2	intron_retention	FALSE	canonical	1	101631	junction_4	418250.1416544606	NA	3	1	TRUE	NA	NA	NA	B	coding	837	2514	166	2679	5.0	1	True	ATTAAA	-17
PB.10487.4	chr7	+	4733	23	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	41	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	178886.2008643939	NA	2	NA	TRUE	NA	NA	NA	B	coding	932	2799	166	2964	35.0	0	True	AATAAA	-21
PB.359.3	chr1	+	2251	4	novel_in_catalog	ATP6V0B	novel	411	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	2175388	junction_2	296736.9928752846	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	91	453	10.0	-9	True	AATAAA	-20
PB.359.2	chr1	+	1006	8	full-splice_match	ATP6V0B	ENST00000472174.6	1298	8	292	0	-4	0	multi-exon	FALSE	canonical	1	1772588	junction_1	377247.92183758353	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	102	719	10.0	-20	True	AATAAA	-20
PB.359.1	chr1	+	1784	7	full-splice_match	ATP6V0B	ENST00000532642.5	1685	7	-13	-86	-13	4	multi-exon	FALSE	canonical	1	1772588	junction_1	368891.5421373499	NA	1	1	TRUE	NA	NA	NA	C	coding	261	786	111	896	5.0	-29	True	AATAAA	-25
PB.10487.5	chr7	+	4311	22	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	-15	-248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	198740.10035562798	NA	4	NA	TRUE	NA	NA	NA	B	coding	895	2688	237	2924	40.0	-71	False	ATTAAA	-17
PB.8624.3	chr3	+	2478	1	novel_in_catalog	NRROS	novel	2564	3	NA	NA	51	-12708	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	46	True	NA	NA
PB.8624.2	chr3	+	2357	4	novel_not_in_catalog	NRROS	novel	2564	3	NA	NA	-35	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	46312.3648596019	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	168	2078	20.0	-6	True	AATAAA	-33
PB.8624.1	chr3	+	2393	3	full-splice_match	NRROS	ENST00000328557.4	2564	3	167	4	96	-4	multi-exon	FALSE	canonical	1	96275	junction_1	1912.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	37	2115	20.0	91	False	AATAAA	-32
PB.359.4	chr1	+	2687	5	incomplete-splice_match	ATP6V0B	ENST00000498664.1	825	6	-1099	1	-2	0	intron_retention	FALSE	canonical	1	2175388	junction_4	264676.35004709056	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	1160	1804	10.0	-4	True	AATAAA	-20
PB.7043.19	chr2	-	2056	10	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-106	combination_of_known_junctions	FALSE	canonical	1	4313	junction_9	796119.9103269015	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	255	1448	5.0	-1	True	AATAAA	-32
PB.4108.2	chr15	-	2405	7	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	0	5	any annotated donor/acceptor	FALSE	canonical	1	6127	junction_2	34199.007016123855	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	168	1466	20.0	-1	True	AATAAA	-27
PB.11145.7	chr8	+	1496	9	full-splice_match	SDCBP	ENST00000260130.8	2167	9	84	587	-1	217	multi-exon	FALSE	canonical	1	278688	junction_5	325460.43059849745	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	67	963	30.0	-8	True	ATTAAA	-18
PB.4108.3	chr15	-	4189	7	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	-4	4	intron_retention	FALSE	canonical	0	0	junction_4	45543.955181597186	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	3148	4182	25.0	5	True	AATAAA	-26
PB.9973.3	chr6	-	1864	3	novel_not_in_catalog	SAYSD1	novel	1972	2	NA	NA	5	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	74388.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	96	647	35.0	1	True	ATTAAA	-22
PB.9973.2	chr6	-	1957	2	full-splice_match	SAYSD1	ENST00000229903.4	2020	2	58	5	58	-5	multi-exon	FALSE	canonical	1	148777	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	43	594	35.0	54	False	ATTAAA	-22
PB.9973.1	chr6	-	6408	3	novel_in_catalog	SAYSD1	novel	1972	2	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	17932	junction_2	23500.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	116	351	4690	5040	25.0	15	True	ATTAAA	-27
PB.9973.5	chr6	-	5300	3	novel_in_catalog	SAYSD1	novel	1972	2	NA	NA	-4	-1131	combination_of_known_junctions	FALSE	canonical	1	17932	junction_2	23500.5	NA	10	1	TRUE	NA	NA	NA	C	coding	116	351	4713	5063	30.0	-8	True	TATAAA	-13
PB.9973.4	chr6	-	5577	3	novel_in_catalog	SAYSD1	novel	1972	2	NA	NA	21	-829	combination_of_known_junctions	FALSE	canonical	1	17932	junction_2	23500.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	4688	5038	25.0	17	True	AATAAA	-17
PB.11426.10	chr9	+	1697	7	novel_in_catalog	SMARCA2	novel	5855	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1110	junction_1	267735.5860736899	NA	1	1	TRUE	NA	NA	NA	C	coding	236	711	155	865	20.0	-9	True	AATAAA	-15
PB.10488.1	chr7	-	3229	21	novel_not_in_catalog	ELMO1	novel	2524	7	NA	NA	-68	115128	any annotated donor/acceptor	FALSE	canonical	1	859	junction_1	78872.51756250397	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	142	2151	35.0	-15	True	ATTAAA	-19
PB.11426.12	chr9	+	1838	9	novel_in_catalog	SMARCA2	novel	5855	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5301	junction_1	334278.9263098399	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	122	1006	20.0	0	True	AATAAA	-15
PB.10487.9	chr7	+	4638	22	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	25	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	198740.10035562798	NA	2	NA	TRUE	NA	NA	NA	B	coding	895	2688	182	2869	35.0	7	True	AATAAA	-21
PB.6004.1	chr19	-	1167	2	full-splice_match	SERTAD1	ENST00000357949.4	2114	2	35	912	35	-912	multi-exon	FALSE	canonical	1	318348	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	236	711	125	835	15.0	1	True	ATTAAA	-20
PB.5244.10	chr17	-	3631	16	novel_in_catalog	GGA3	novel	3766	16	NA	NA	0	196	intron_retention	FALSE	canonical	1	218829	junction_14	74142.89429221567	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	7	2208	60.0	9	True	NA	NA
PB.5244.11	chr17	-	3381	17	full-splice_match	GGA3	ENST00000537686.5	4069	17	199	489	-5	196	multi-exon	FALSE	canonical	1	218829	junction_15	73803.96150082219	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	19	2190	60.0	-3	True	NA	NA
PB.5244.12	chr17	-	3280	16	full-splice_match	GGA3	ENST00000538886.5	3766	16	-3	489	-3	196	multi-exon	FALSE	canonical	1	38027	junction_13	100632.93691528412	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	17	2089	60.0	-1	True	NA	NA
PB.7297.4	chr20	-	10296	37	full-splice_match	CHD6	ENST00000373233.7	10818	37	70	452	-40	-452	multi-exon	FALSE	canonical	1	80559	junction_36	31633.223974706572	NA	4	NA	TRUE	NA	NA	NA	C	coding	2713	8142	115	8256	15.0	-52	True	NA	NA
PB.6901.8	chr2	-	992	4	full-splice_match	ORMDL1	ENST00000392350.7	2009	4	28	989	-8	0	multi-exon	FALSE	canonical	1	225981	junction_3	256778.57107416284	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	76	537	20.0	-2	True	ATTAAA	-19
PB.7297.6	chr20	-	3308	19	novel_in_catalog	CHD6	novel	10818	37	NA	NA	-2	-17181	combination_of_known_junctions	FALSE	canonical	1	15815	junction_18	48025.63854627836	NA	0	NA	TRUE	NA	NA	NA	C	coding	1053	3162	72	3233	25.0	-5	True	NA	NA
PB.7638.6	chr22	-	5296	10	novel_not_in_catalog	MAPK1	novel	11022	9	NA	NA	13	3658	any annotated donor/acceptor	FALSE	canonical	1	1013	junction_9	345753.8780377927	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	380	1372	45.0	-23	True	ATTAAA	-19
PB.7297.1	chr20	-	10708	37	full-splice_match	CHD6	ENST00000373233.7	10818	37	100	10	-10	-10	multi-exon	FALSE	canonical	1	80559	junction_36	31633.223974706572	NA	5	2	TRUE	NA	NA	NA	C	coding	2713	8142	85	8226	70.0	-22	True	AATAAA	-23
PB.6901.1	chr2	-	2645	4	full-splice_match	ORMDL1	ENST00000392350.7	2009	4	-9	-627	-2	627	multi-exon	FALSE	canonical	1	225981	junction_3	256778.57107416284	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	113	574	20.0	-10	True	NA	NA
PB.10488.5	chr7	-	3361	20	novel_in_catalog	ELMO1	novel	2524	7	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	1	9112	junction_4	85777.81180978764	NA	3	1	TRUE	NA	NA	NA	C	coding	593	1782	100	1881	10.0	-15	True	AATAAA	-16
PB.6901.2	chr2	-	1986	4	full-splice_match	ORMDL1	ENST00000392350.7	2009	4	21	2	-15	-1	multi-exon	FALSE	canonical	1	225981	junction_3	256778.57107416284	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	83	544	40.0	-9	True	AATAAA	-21
PB.7297.8	chr20	-	3040	17	incomplete-splice_match	CHD6	ENST00000373233.7	10818	37	100	70923	-10	-1	3prime_fragment	FALSE	canonical	1	80559	junction_16	41330.12760077198	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	85	2832	30.0	-22	True	NA	NA
PB.6901.7	chr2	-	2206	5	novel_not_in_catalog	ORMDL1	novel	2009	4	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	3952	junction_2	329209.9235343613	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	74	409	40.0	0	True	AATAAA	-22
PB.6901.6	chr2	-	2402	5	novel_not_in_catalog	ORMDL1	novel	2009	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	8256	junction_4	335555.20161098306	NA	2	NA	TRUE	NA	NA	NA	C	coding	153	462	498	959	40.0	-6	True	AATAAA	-22
PB.7342.13	chr20	-	3666	15	novel_in_catalog	STAU1	novel	3684	14	NA	NA	10	-4	intron_retention	FALSE	canonical	1	15698	junction_13	373012.9791909159	NA	3	1	TRUE	NA	NA	NA	C	coding	542	1629	505	2133	20.0	9	True	AATAAA	-9
PB.9865.9	chr6	-	1434	7	novel_in_catalog	HLA-C	novel	754	2	NA	NA	0	-4	intron_retention	FALSE	canonical	1	759	junction_3	5352586.898033635	NA	2	NA	TRUE	NA	NA	NA	C	coding	332	999	20	1018	20.0	1	True	AATAAA	-17
PB.7638.3	chr22	-	4890	9	full-splice_match	MAPK1	ENST00000215832.10	11022	9	247	5885	58	3599	multi-exon	FALSE	canonical	1	512215	junction_8	125647.88117891205	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	54	1025	80.0	771	False	TTTAAA	-37
PB.10488.6	chr7	-	3664	22	full-splice_match	ELMO1	ENST00000310758.8	4022	22	357	1	-36	-1	multi-exon	FALSE	canonical	1	62122	junction_21	77648.41850017443	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	292	2475	10.0	-29	True	AATAAA	-14
PB.9845.11	chr6	+	2544	8	full-splice_match	HLA-E	ENST00000376630.4	2601	8	45	12	0	-12	multi-exon	FALSE	canonical	1	3991824	junction_1	1178466.805725549	NA	5	1	TRUE	NA	NA	NA	C	coding	358	1077	21	1097	15.0	0	True	AATAAA	-18
PB.10618.1	chr7	-	6069	17	novel_not_in_catalog	POM121C	novel	4073	2	NA	NA	-28	2	any annotated donor/acceptor	TRUE	canonical	1	3766	junction_5	162039.8250959467	NA	1	NA	TRUE	NA	NA	NA	C	coding	987	2964	1095	4058	20.0	-1	True	AATAAA	-20
PB.7342.10	chr20	-	3292	12	full-splice_match	STAU1	ENST00000347458.9	3136	12	26	-182	26	0	multi-exon	FALSE	canonical	1	38259	junction_11	300931.78258274705	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	265	1755	15.0	-8	True	AATAAA	-13
PB.7111.41	chr2	-	3027	19	incomplete-splice_match	HDLBP	ENST00000391976.6	4489	28	90	10176	1	423	3prime_fragment	FALSE	canonical	1	286089	junction_18	753836.3621250886	NA	1	1	TRUE	NA	NA	NA	C	coding	898	2697	204	2900	75.0	22	True	NA	NA
PB.5268.4	chr17	-	3234	8	novel_in_catalog	PRPSAP1	novel	3660	10	NA	NA	235	1	intron_retention	FALSE	canonical	1	277524	junction_7	100005.72149305728	NA	4	NA	TRUE	NA	NA	NA	C	coding	252	759	212	970	20.0	-1	True	AATAAA	-14
PB.5268.5	chr17	-	2426	9	novel_in_catalog	PRPSAP1	novel	3660	10	NA	NA	239	1	intron_retention	FALSE	canonical	1	277524	junction_8	134189.15836050242	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	208	966	20.0	3	True	AATAAA	-14
PB.5268.6	chr17	-	1998	9	novel_in_catalog	PRPSAP1	novel	3660	10	NA	NA	260	46	intron_retention	FALSE	canonical	1	277524	junction_8	134189.15836050242	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	187	945	20.0	24	True	GATAAA	-18
PB.5268.7	chr17	-	3668	8	novel_not_in_catalog	PRPSAP1	novel	3660	10	NA	NA	-258	0	intron_retention	FALSE	canonical	0	0	junction_2	223387.05438090992	NA	3	1	TRUE	NA	NA	NA	C	coding	160	483	693	1175	30.0	27	True	AATAAA	-18
PB.5268.1	chr17	-	2277	10	full-splice_match	PRPSAP1	ENST00000446526.7	3660	10	220	1163	220	285	multi-exon	FALSE	canonical	1	277524	junction_9	127629.65708120768	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	227	1384	65.0	-16	True	NA	NA
PB.5268.2	chr17	-	1841	10	full-splice_match	PRPSAP1	ENST00000446526.7	3660	10	518	1301	-3	147	multi-exon	FALSE	canonical	1	277524	junction_9	127629.65708120768	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	16	1086	85.0	-1	True	TTTAAA	-6
PB.5268.3	chr17	-	1944	10	full-splice_match	PRPSAP1	ENST00000446526.7	3660	10	269	1447	-252	1	multi-exon	FALSE	canonical	1	277524	junction_9	127629.65708120768	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	178	1335	20.0	33	True	AATAAA	-14
PB.4990.8	chr17	-	3554	23	novel_not_in_catalog	STAT3	novel	5047	24	NA	NA	9	0	intron_retention	FALSE	canonical	1	44	junction_17	355746.3917359539	NA	48	5	TRUE	NA	NA	NA	C	coding	348	1047	882	1928	100.0	0	True	NA	NA
PB.10535.3	chr7	+	2785	1	incomplete-splice_match	ADCY1	ENST00000297323.11	12503	20	143207	2603	33344	-2603	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	104	315	1354	1668	95.0	NA	False	NA	NA
PB.7342.15	chr20	-	3196	13	full-splice_match	STAU1	ENST00000360426.8	3211	13	10	5	10	-5	multi-exon	FALSE	canonical	1	333209	junction_3	235513.9006201238	NA	3	NA	TRUE	NA	NA	NA	C	coding	496	1491	356	1846	25.0	9	True	AATAAA	-9
PB.8534.2	chr3	+	2884	14	novel_in_catalog	ACTL6A	novel	1901	14	NA	NA	3	2	intron_retention	FALSE	canonical	1	27707	junction_5	271025.0953414248	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	1814	2494	30.0	0	True	AATAAA	-16
PB.4990.1	chr17	-	4944	24	full-splice_match	STAT3	ENST00000588969.5	2772	24	-5	-2167	-5	0	multi-exon	FALSE	canonical	1	154019	junction_23	257508.44500129117	NA	2	NA	TRUE	NA	NA	NA	C	coding	770	2313	211	2523	20.0	-14	True	AATAAA	-19
PB.3303.11	chr14	-	8171	38	full-splice_match	CHD8	ENST00000646647.1	8471	38	6	294	6	2	multi-exon	FALSE	canonical	1	97548	junction_34	109597.15542319563	NA	0	NA	TRUE	NA	NA	NA	C	coding	2581	7746	305	8050	90.0	-9	True	NA	NA
PB.3454.13	chr14	-	2733	18	incomplete-splice_match	DLGAP5	ENST00000395425.6	2954	20	-34	2489	30	-273	3prime_fragment	FALSE	canonical	1	337932	junction_10	58554.297544715	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	118	2553	30.0	6	True	AATATA	-23
PB.4990.2	chr17	-	4884	24	full-splice_match	STAT3	ENST00000585517.5	3319	24	-35	-1530	8	0	multi-exon	FALSE	canonical	1	103367	junction_23	301650.330417224	NA	3	NA	TRUE	NA	NA	NA	C	coding	722	2169	201	2369	20.0	-1	True	AATAAA	-19
PB.4990.5	chr17	-	4956	24	full-splice_match	STAT3	ENST00000264657.9	5047	24	91	0	5	0	multi-exon	FALSE	canonical	1	278333	junction_23	241509.96068015823	NA	3	NA	TRUE	NA	NA	NA	C	coding	770	2313	223	2535	20.0	-4	True	AATAAA	-19
PB.3303.15	chr14	-	3218	1	novel_in_catalog	CHD8	novel	8471	38	NA	NA	-2	-2328	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	63	192	283	474	100.0	-4	True	NA	NA
PB.4990.7	chr17	-	3447	24	full-splice_match	STAT3	ENST00000264657.9	5047	24	52	1548	-34	0	multi-exon	FALSE	canonical	1	278333	junction_23	241509.96068015823	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	262	2574	100.0	-43	True	NA	NA
PB.3454.16	chr14	-	1868	14	incomplete-splice_match	DLGAP5	ENST00000395425.6	2954	20	-51	10549	13	-8333	3prime_fragment	FALSE	canonical	1	337932	junction_6	53568.748256343264	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1734	135	1868	60.0	-11	True	AAAACA	-44
PB.9928.3	chr6	+	2377	14	novel_in_catalog	PHF1	novel	609	6	NA	NA	53	14	intron_retention	FALSE	canonical	1	182428	junction_1	144354.27717489493	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	219	1310	55.0	-40	True	AATAAA	-4
PB.9928.2	chr6	+	2232	15	full-splice_match	PHF1	ENST00000495509.6	1752	15	-113	-367	52	4	multi-exon	FALSE	canonical	1	162619	junction_11	169821.26265037712	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	220	1479	75.0	-41	True	NA	NA
PB.9928.1	chr6	+	2272	15	full-splice_match	PHF1	ENST00000374516.7	2330	15	23	35	23	4	multi-exon	FALSE	canonical	1	182428	junction_1	160016.14265596736	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	249	1952	75.0	-9274	False	NA	NA
PB.2561.4	chr12	+	3134	3	incomplete-splice_match	ARID2	ENST00000427628.5	323	4	-185	21990	23	-21990	3prime_fragment	FALSE	canonical	1	87097	junction_1	17104.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-18	True	NA	NA
PB.2561.3	chr12	+	6049	21	full-splice_match	ARID2	ENST00000334344.10	8642	21	23	2570	23	-2570	multi-exon	FALSE	canonical	1	84766	junction_4	44395.92226238239	NA	0	NA	TRUE	NA	NA	NA	C	coding	1835	5508	150	5657	45.0	-18	True	ATTAAA	-18
PB.2561.2	chr12	+	4385	11	incomplete-splice_match	ARID2	ENST00000422737.5	5481	20	-228	51684	23	0	3prime_fragment	FALSE	canonical	1	84766	junction_4	24769.70560664781	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	150	1652	80.0	-18	True	NA	NA
PB.2561.1	chr12	+	5839	21	full-splice_match	ARID2	ENST00000334344.10	8642	21	23	2780	23	-2780	multi-exon	FALSE	canonical	1	84766	junction_4	44395.92226238239	NA	1	NA	TRUE	NA	NA	NA	C	coding	1835	5508	150	5657	80.0	-18	True	NA	NA
PB.7110.67	chr2	+	4815	13	incomplete-splice_match	SEPT2	ENST00000360051.7	3613	14	686	0	16	0	5prime_fragment	FALSE	canonical	1	191394	junction_1	868694.2790532268	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	1643	2728	25.0	-1579	False	AATAAA	-20
PB.1166.7	chr1	-	3804	23	full-splice_match	PARP1	ENST00000366794.9	3958	23	44	110	44	-110	multi-exon	FALSE	canonical	1	256970	junction_13	508193.5105697195	NA	31	3	TRUE	NA	NA	NA	C	coding	1014	3045	101	3145	15.0	1	True	ATTAAA	-16
PB.6398.1	chr2	+	5077	7	novel_in_catalog	LCLAT1	novel	583	4	NA	NA	-9	-1	combination_of_known_junctions	TRUE	canonical	1	10206	junction_1	52405.47964881366	NA	5	NA	TRUE	NA	NA	NA	C	coding	414	1245	229	1473	15.0	-29	True	AATAAA	-19
PB.8534.5	chr3	+	1582	14	full-splice_match	ACTL6A	ENST00000450518.6	1750	14	45	123	1	43	multi-exon	FALSE	canonical	1	219310	junction_1	211870.1548553686	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	145	1308	30.0	5	True	AGTAAA	-17
PB.7265.27	chr20	-	4605	16	full-splice_match	RBM39	ENST00000463004.5	4580	16	-31	6	7	-4	multi-exon	FALSE	canonical	1	212934	junction_1	449008.9011312211	NA	3	NA	TRUE	NA	NA	NA	C	coding	373	1122	2618	3739	30.0	-8	True	AATAAA	-13
PB.6398.2	chr2	+	4889	6	full-splice_match	LCLAT1	ENST00000379509.7	4888	6	-1	0	-1	0	multi-exon	FALSE	canonical	1	44247	junction_1	32392.569668984273	NA	5	NA	TRUE	NA	NA	NA	C	coding	376	1131	154	1284	15.0	-11	True	AATAAA	-20
PB.1166.9	chr1	-	3460	23	full-splice_match	PARP1	ENST00000366794.9	3958	23	105	393	14	211	multi-exon	FALSE	canonical	1	256970	junction_13	508193.5105697195	NA	1	NA	TRUE	NA	NA	NA	C	coding	1014	3045	40	3084	15.0	121	False	AATACA	-17
PB.8525.13	chr3	-	2509	2	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	-33861	any annotated donor/acceptor	FALSE	canonical	1	59620	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.3136.6	chr13	-	1404	10	novel_in_catalog	EPSTI1	novel	3160	13	NA	NA	-2	504	no_combination_of_known_junctions	FALSE	canonical	1	3892	junction_1	110072.5328308678	NA	3	NA	TRUE	NA	NA	NA	C	coding	355	1068	77	1144	25.0	-1	True	AATAAA	-15
PB.6648.3	chr2	+	2821	4	incomplete-splice_match	UNC50	ENST00000357765.6	1143	6	38	3	38	0	intron_retention	FALSE	canonical	1	370904	junction_1	143267.2567903156	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	115	663	25.0	-9	True	AATAAA	-14
PB.8020.5	chr3	+	4355	19	novel_not_in_catalog	OXSR1	novel	471	2	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95651.71552797391	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	176	1759	20.0	-86	True	AATAAA	-16
PB.8469.1	chr3	-	1667	3	novel_not_in_catalog	SERP1	novel	3934	4	NA	NA	-9	-18	any annotated donor/acceptor	FALSE	canonical	1	4874	junction_2	2909.5	NA	7	NA	TRUE	NA	NA	NA	C	coding	102	309	51	359	95.0	-1	True	NA	NA
PB.7110.63	chr2	+	3181	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	679	junction_2	1089819.992660764	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	510	1094	25.0	0	True	AATAAA	-20
PB.11188.1	chr8	+	1031	3	full-splice_match	TMEM70	ENST00000312184.5	2018	3	-1	988	1	209	multi-exon	FALSE	canonical	1	322231	junction_1	86193.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	260	783	75	857	40.0	13	True	AATAAA	-21
PB.10481.1	chr7	-	3996	14	incomplete-splice_match	DPY19L1	ENST00000638088.1	5075	22	68021	6	4101	-6	5prime_fragment	TRUE	canonical	1	22772	junction_10	79372.80371458975	NA	1	NA	TRUE	NA	NA	NA	B	coding	424	1275	31	1305	20.0	NA	False	ATTAAA	-18
PB.7110.62	chr2	+	3455	13	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2276	junction_1	1070268.0250633063	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	403	1368	25.0	0	True	AATAAA	-20
PB.6967.12	chr2	-	2531	17	novel_in_catalog	NDUFS1	novel	11819	19	NA	NA	18	-17	no_combination_of_known_junctions	FALSE	canonical	1	2437	junction_16	264266.4455525604	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	170	2182	25.0	-1	True	ATTAAA	-4
PB.7265.24	chr20	-	4427	18	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	-1	intron_retention	FALSE	canonical	1	34065	junction_15	501434.8966773937	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	2455	3558	25.0	1	True	AATAAA	-16
PB.7532.13	chr21	-	2122	2	full-splice_match	C2CD2	ENST00000478372.1	356	2	-466	-1300	-95	1300	multi-exon	FALSE	canonical	1	14456	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	338	772	30.0	-1	True	AAGAAA	-20
PB.7532.10	chr21	-	1961	7	incomplete-splice_match	C2CD2	ENST00000380486.3	6345	14	-143	26597	-143	451	3prime_fragment	FALSE	canonical	1	60125	junction_6	30003.851769397876	NA	4	NA	TRUE	NA	NA	NA	C	coding	318	957	386	1342	90.0	-16	False	NA	NA
PB.7532.11	chr21	-	5093	1	genic	C2CD2	novel	NA	NA	NA	NA	-105	4043	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	140	423	348	770	95.0	-11	True	NA	NA
PB.5150.14	chr17	+	5983	31	novel_in_catalog	CLTC	novel	8587	32	NA	NA	-10	-349	no_combination_of_known_junctions	FALSE	canonical	1	7861	junction_5	692896.1278419772	NA	0	NA	TRUE	NA	NA	NA	C	coding	1617	4854	219	5072	55.0	9	True	AATAAA	-15
PB.5150.15	chr17	+	5525	32	full-splice_match	CLTC	ENST00000269122.7	7760	32	68	2167	2	29	multi-exon	FALSE	canonical	1	1037811	junction_1	612872.7060856395	NA	1	NA	TRUE	NA	NA	NA	C	coding	1675	5028	207	5234	30.0	21	True	TTTAAA	-25
PB.5150.16	chr17	+	5795	31	incomplete-splice_match	CLTC	ENST00000269122.7	7760	32	24520	1547	-3268	-349	5prime_fragment	FALSE	canonical	1	1137488	junction_1	598782.8455541977	NA	0	NA	TRUE	NA	NA	NA	C	coding	1621	4866	19	4884	55.0	-3880	False	AATAAA	-15
PB.5150.10	chr17	+	6094	32	full-splice_match	CLTC	ENST00000269122.7	7760	32	40	1626	-26	-428	multi-exon	FALSE	canonical	1	1037811	junction_1	612872.7060856395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1675	5028	235	5262	40.0	-7	True	NA	NA
PB.5150.11	chr17	+	6340	31	novel_in_catalog	CLTC	novel	8587	32	NA	NA	-19	-1	no_combination_of_known_junctions	TRUE	canonical	1	7861	junction_5	692896.1278419772	NA	1	NA	TRUE	NA	NA	NA	C	coding	1617	4854	228	5081	25.0	0	True	AATAAA	-17
PB.5150.12	chr17	+	5239	31	full-splice_match	CLTC	ENST00000393043.5	5292	31	47	6	-19	-6	multi-exon	FALSE	canonical	1	1037811	junction_1	565217.3163775239	NA	0	NA	TRUE	NA	NA	NA	C	coding	1639	4920	228	5147	35.0	0	True	AATACA	-30
PB.5150.13	chr17	+	6534	33	novel_in_catalog	CLTC	novel	8587	32	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	117199	junction_31	719280.8915396313	NA	0	NA	TRUE	NA	NA	NA	C	coding	1682	5049	227	5275	25.0	1	True	AATAAA	-17
PB.7078.7	chr2	+	2082	8	incomplete-splice_match	ATG16L1	ENST00000392018.1	3313	19	29389	8	3955	0	5prime_fragment	FALSE	canonical	1	182777	junction_2	31764.467459404885	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	329	766	20.0	5375	False	AATAAA	-22
PB.10727.9	chr7	-	2396	5	novel_not_in_catalog	TSC22D4	novel	837	5	NA	NA	-31	-2	any annotated donor/acceptor	FALSE	canonical	1	3767	junction_2	490350.8666095636	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	677	1726	25.0	-1	True	ATTAAA	-36
PB.10727.8	chr7	-	2285	5	full-splice_match	TSC22D4	ENST00000300181.6	2383	5	58	40	11	-21	multi-exon	FALSE	canonical	1	441335	junction_4	344860.16748921224	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	698	1885	70.0	-22	True	NA	NA
PB.9298.9	chr5	-	4132	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	-90	-888	-22	37	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	517	2313	30.0	123	False	AAAAAG	-16
PB.9298.8	chr5	-	4391	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	-14	-1223	-9	284	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	2	NA	TRUE	NA	NA	NA	C	coding	598	1797	441	2237	55.0	199	False	AATAAA	-12
PB.5733.5	chr19	+	3557	5	novel_not_in_catalog	ZNF440	novel	4189	4	NA	NA	-3	408	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	36252.25518071255	NA	2	1	TRUE	NA	NA	NA	C	coding	598	1797	168	1964	40.0	-11	True	AATAAA	-17
PB.10727.3	chr7	-	2147	5	novel_not_in_catalog	TSC22D4	novel	837	5	NA	NA	21	-2	any annotated donor/acceptor	FALSE	canonical	1	28913	junction_4	470872.4919945818	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	522	1709	25.0	51	True	ATTAAA	-36
PB.10727.2	chr7	-	2220	6	novel_not_in_catalog	TSC22D4	novel	837	5	NA	NA	1	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	440202.8901579816	NA	16	2	TRUE	NA	NA	NA	C	coding	395	1188	589	1776	15.0	22	False	ATTAAA	-42
PB.10727.1	chr7	-	2403	7	novel_in_catalog	C7orf61	novel	1004	3	NA	NA	-14922	-6	no_combination_of_known_junctions	FALSE	canonical	1	2582	junction_3	301221.70120730385	NA	1	NA	TRUE	NA	NA	NA	A	coding	338	1017	670	1686	20.0	6	True	AATAAA	-16
PB.9298.6	chr5	-	5080	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	10	-1936	2	-213	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	417	2213	25.0	-2	True	ATTAAA	-15
PB.10727.7	chr7	-	2684	5	novel_not_in_catalog	TSC22D4	novel	837	5	NA	NA	-23	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	480957.13042562327	NA	10	NA	TRUE	NA	NA	NA	C	coding	395	1188	1059	2246	25.0	7	True	ATTAAA	-36
PB.10727.6	chr7	-	2699	4	novel_in_catalog	TSC22D4	novel	837	5	NA	NA	18	-2	intron_retention	FALSE	canonical	1	441335	junction_3	107598.70610849473	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	691	1839	25.0	-15	True	ATTAAA	-36
PB.10727.4	chr7	-	1478	5	novel_not_in_catalog	TSC22D4	novel	837	5	NA	NA	11	-2	any annotated donor/acceptor	FALSE	canonical	1	11816	junction_4	476821.8498655971	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	570	1040	25.0	-22	True	ATTAAA	-36
PB.7881.4	chr22	-	6333	24	novel_in_catalog	TUBGCP6	novel	5612	25	NA	NA	-62	1	intron_retention	FALSE	canonical	1	170311	junction_22	81686.37088220703	NA	1	NA	TRUE	NA	NA	NA	C	coding	1437	4314	596	4909	5.0	6351	False	AATAAA	-14
PB.371.5	chr1	+	2747	2	incomplete-splice_match	UROD	ENST00000494399.5	1848	7	3	3	-3	-3	intron_retention	FALSE	canonical	1	146962	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	1927	2265	20.0	1	True	AATAAA	-13
PB.371.4	chr1	+	1676	8	novel_in_catalog	UROD	novel	1300	10	NA	NA	2	-2	intron_retention	FALSE	canonical	1	764925	junction_1	288180.11335557606	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	1269	1601	20.0	0	True	AATAAA	-14
PB.371.6	chr1	+	2704	2	incomplete-splice_match	UROD	ENST00000494399.5	1848	7	501	3	-33	-3	intron_retention	FALSE	canonical	1	1224705	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	1884	2222	20.0	-222	False	AATAAA	-13
PB.371.1	chr1	+	1258	10	novel_in_catalog	UROD	novel	1300	10	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	146962	junction_1	428229.7372732722	NA	4	NA	TRUE	NA	NA	NA	C	coding	332	999	185	1183	20.0	-17	True	AATAAA	-14
PB.371.3	chr1	+	1993	6	novel_in_catalog	UROD	novel	1300	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	764925	junction_1	339054.4521491496	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	1586	1918	20.0	-2	True	AATAAA	-14
PB.7881.2	chr22	-	6071	25	full-splice_match	TUBGCP6	ENST00000248846.9	5612	25	-459	0	-31	0	multi-exon	FALSE	canonical	1	81948	junction_9	89532.40857426642	NA	0	NA	TRUE	NA	NA	NA	C	coding	1819	5460	565	6024	5.0	-1	True	AATAAA	-18
PB.7881.1	chr22	-	6547	22	novel_not_in_catalog	TUBGCP6	novel	5612	25	NA	NA	-7	0	intron_retention	FALSE	canonical	1	3970	junction_16	103353.71474713304	NA	8	NA	TRUE	NA	NA	NA	C	coding	791	2376	2486	4861	5.0	-1	True	AATAAA	-18
PB.5367.2	chr18	+	3344	1	full-splice_match	MYL12A	ENST00000608786.1	738	1	-109	-2497	-3	1216	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-56	True	NA	NA
PB.11057.2	chr8	+	3456	2	full-splice_match	PNOC	ENST00000519592.5	1310	2	0	-2146	0	-1001	multi-exon	FALSE	canonical	1	97257	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	208	546	100.0	0	True	NA	NA
PB.8079.11	chr3	-	4132	22	novel_in_catalog	SCAP	novel	3749	22	NA	NA	-36	-2	no_combination_of_known_junctions	TRUE	canonical	1	3194	junction_20	186020.43166365105	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	852	4001	50.0	-55	False	ATTAAA	-6
PB.618.6	chr1	-	2874	2	full-splice_match	ST7L	ENST00000485753.5	1023	2	-1853	2	5	2	multi-exon	FALSE	canonical	1	203743	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	96	291	27	317	20.0	-15	True	NA	NA
PB.8697.1	chr4	+	2888	11	full-splice_match	TRMT44	ENST00000389737.4	2799	11	-37	-52	-19	24	multi-exon	FALSE	canonical	1	49630	junction_2	19890.657864686124	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	38	2311	65.0	-21	True	AATAAA	-43
PB.11716.11	chr9	-	5765	49	full-splice_match	ECPAS	ENST00000338205.9	7078	49	96	1217	96	-23	multi-exon	FALSE	canonical	1	95912	junction_48	219824.89260333488	NA	0	NA	TRUE	NA	NA	NA	C	coding	1839	5520	125	5644	65.0	160	False	AGTAAA	-34
PB.9137.9	chr5	+	3090	15	full-splice_match	MTRR	ENST00000440940.6	3215	15	-25	150	16	-142	multi-exon	FALSE	canonical	1	89262	junction_1	71221.81580854511	NA	2	NA	TRUE	NA	NA	NA	C	coding	698	2097	78	2174	60.0	16	True	NA	NA
PB.365.2	chr1	+	2912	20	novel_in_catalog	KIF2C	novel	1124	11	NA	NA	8	-45	intron_retention	FALSE	canonical	1	274640	junction_5	79595.29759506234	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	1263	2369	75.0	-29	True	NA	NA
PB.365.3	chr1	+	2846	21	novel_not_in_catalog	KIF2C	novel	1124	11	NA	NA	12	-37	any annotated donor/acceptor	FALSE	canonical	1	1424	junction_15	127184.1216923225	NA	4	NA	TRUE	NA	NA	NA	C	coding	730	2193	103	2295	60.0	-25	True	NA	NA
PB.9137.8	chr5	+	2503	13	novel_in_catalog	MTRR	novel	711	4	NA	NA	14	349	combination_of_known_junctions	FALSE	canonical	1	13061	junction_6	102271.06579209	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	1460	1933	30.0	14	True	GATAAA	-25
PB.365.6	chr1	+	2305	21	full-splice_match	KIF2C	ENST00000372224.8	2879	21	17	557	12	331	multi-exon	FALSE	canonical	1	274640	junction_5	78617.84764814858	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	103	2274	10.0	-25	True	AATAAA	-18
PB.365.7	chr1	+	3979	19	novel_in_catalog	KIF2C	novel	1124	11	NA	NA	24	-45	intron_retention	FALSE	canonical	1	274640	junction_5	80559.75391812444	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	2330	3436	75.0	-13	True	NA	NA
PB.365.4	chr1	+	2777	21	novel_not_in_catalog	KIF2C	novel	1124	11	NA	NA	12	-45	any annotated donor/acceptor	FALSE	canonical	1	2982	junction_9	126920.45501159377	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	1128	2234	75.0	-25	True	NA	NA
PB.365.5	chr1	+	2698	20	novel_in_catalog	KIF2C	novel	1124	11	NA	NA	12	-41	combination_of_known_junctions	FALSE	canonical	1	35033	junction_5	117893.36535595593	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	103	2151	70.0	-25	True	NA	NA
PB.365.8	chr1	+	2875	21	novel_in_catalog	KIF2C	novel	1124	11	NA	NA	36	-3	combination_of_known_junctions	FALSE	canonical	1	5232	junction_1	126610.82052031533	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	140	2290	20.0	-1	True	AATAAA	-34
PB.8697.2	chr4	+	2308	11	novel_in_catalog	TRMT44	novel	1666	9	NA	NA	2	-18	combination_of_known_junctions	FALSE	canonical	1	5656	junction_10	32510.535270278153	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	17	2245	25.0	0	True	NA	NA
PB.3621.2	chr14	-	2612	11	full-splice_match	FBLN5	ENST00000342058.8	2123	11	141	-630	9	0	multi-exon	FALSE	canonical	1	180152	junction_10	70969.36302799963	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	454	1800	10.0	9	True	ATTAAA	-12
PB.3621.1	chr14	-	2725	12	novel_in_catalog	FBLN5	novel	2294	2	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	5772	junction_8	142457.9898999371	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	735	1913	10.0	-3	True	ATTAAA	-12
PB.5740.3	chr19	+	2838	4	full-splice_match	ZNF136	ENST00000343979.5	3643	4	37	768	-15	320	multi-exon	FALSE	canonical	1	52825	junction_1	16327.533602952884	NA	4	NA	TRUE	NA	NA	NA	C	coding	540	1623	104	1726	40.0	2	True	AATAAA	-20
PB.1911.2	chr11	+	4051	13	novel_not_in_catalog	CRY2	novel	2053	12	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	63650.51037037899	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	17	1798	20.0	-3	True	TATAAA	-20
PB.1911.1	chr11	+	4133	12	full-splice_match	CRY2	ENST00000443527.6	4203	12	68	2	-1	-2	multi-exon	FALSE	canonical	1	138886	junction_1	34888.490546239474	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	18	1799	20.0	-4	True	TATAAA	-19
PB.5740.2	chr19	+	2520	4	full-splice_match	ZNF136	ENST00000343979.5	3643	4	35	1088	-17	0	multi-exon	FALSE	canonical	1	52825	junction_1	16327.533602952884	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	106	1728	70.0	0	True	NA	NA
PB.6196.3	chr19	+	4315	4	full-splice_match	ZNF845	ENST00000458035.2	6351	4	3	2033	0	4	multi-exon	FALSE	canonical	1	25641	junction_3	4817.095967027806	NA	0	NA	TRUE	NA	NA	NA	C	coding	970	2913	118	3030	5.0	0	True	NA	NA
PB.2498.31	chr12	-	2242	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-24	-348	combination_of_known_junctions	FALSE	canonical	1	34343	junction_15	141407.75922410417	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	249	2198	25.0	-25	True	ATTAAA	-16
PB.521.3	chr1	-	4803	3	full-splice_match	RBMXL1	ENST00000399794.6	5084	3	286	-5	85	2	multi-exon	FALSE	canonical	1	49575	junction_1	34774.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	431	1603	20.0	324	False	NA	NA
PB.11081.2	chr8	+	3526	9	full-splice_match	MAK16	ENST00000518389.1	872	9	-24	-2630	-6	16	multi-exon	FALSE	canonical	1	6817	junction_5	98909.04936986302	NA	4	NA	TRUE	NA	NA	NA	C	coding	134	405	32	436	40.0	-6	True	AATAAA	-32
PB.6884.42	chr2	+	2694	12	incomplete-splice_match	DNAJC10	ENST00000616986.4	5783	23	25200	1506	11393	674	5prime_fragment	FALSE	canonical	1	585567	junction_1	133292.13942680642	NA	2	NA	TRUE	NA	NA	NA	C	coding	277	834	474	1307	25.0	NA	False	ATTAAA	-29
PB.8257.12	chr3	+	1985	11	full-splice_match	ST3GAL6	ENST00000469105.5	2837	11	-4	856	-3	5	multi-exon	FALSE	canonical	1	25999	junction_1	56619.436935472964	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	611	1348	25.0	0	True	NA	NA
PB.10650.12	chr7	-	2706	12	full-splice_match	SLC25A40	ENST00000341119.9	4045	12	-1	1340	-1	1202	multi-exon	FALSE	canonical	1	121255	junction_10	47449.18031252572	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	349	1365	15.0	6	True	AATAAA	-19
PB.11057.1	chr8	+	3289	2	full-splice_match	PNOC	ENST00000519592.5	1310	2	-5	-1974	-5	-1173	multi-exon	FALSE	canonical	1	97257	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	213	551	65.0	-5	True	NA	NA
PB.7265.21	chr20	-	2676	16	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	10491	junction_5	493420.6751588749	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	310	1806	25.0	23	True	AATAAA	-17
PB.10650.11	chr7	-	2948	13	novel_in_catalog	SLC25A40	novel	4045	12	NA	NA	-28	-1231	combination_of_known_junctions	FALSE	canonical	1	37489	junction_11	69178.72563045786	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	482	1498	30.0	-29	True	ATTAAA	-18
PB.735.1	chr1	+	2752	7	full-splice_match	PRUNE1	ENST00000368936.5	2788	7	36	0	-11	0	multi-exon	FALSE	canonical	1	41059	junction_2	65557.97972956627	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	458	1273	5.0	-9	True	ATTAAA	-16
PB.735.3	chr1	+	2897	7	novel_in_catalog	PRUNE1	novel	1065	7	NA	NA	-3	-1	combination_of_known_junctions	TRUE	canonical	1	42362	junction_6	64355.84266664009	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	217	1419	5.0	-44	True	ATTAAA	-15
PB.735.2	chr1	+	2967	8	novel_in_catalog	PRUNE1	novel	1065	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	28430	junction_2	64846.62439375935	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	217	1488	5.0	-44	True	ATTAAA	-16
PB.735.5	chr1	+	2551	5	novel_in_catalog	PRUNE1	novel	1065	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7319	junction_3	51310.95748168709	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	566	1072	5.0	-41	True	ATTAAA	-16
PB.735.4	chr1	+	2666	6	novel_in_catalog	PRUNE1	novel	1065	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7528	junction_2	68078.49903927084	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	372	1187	5.0	-41	True	ATTAAA	-16
PB.7078.6	chr2	+	5343	16	novel_in_catalog	ATG16L1	novel	589	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	83090	junction_8	64455.035129581265	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	157	1569	20.0	-1	True	AATAAA	-22
PB.8020.3	chr3	+	4401	17	novel_in_catalog	OXSR1	novel	471	2	NA	NA	-29	-3	no_combination_of_known_junctions	FALSE	canonical	1	18144	junction_11	95464.50540711453	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	260	1807	15.0	-29	True	AATAAA	-14
PB.1688.2	chr10	-	1399	11	full-splice_match	NSMCE4A	ENST00000369023.7	1394	11	-11	6	-11	-3	multi-exon	FALSE	canonical	1	393058	junction_10	88477.82808478066	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	64	1221	30.0	2566	False	ATTAAA	-23
PB.1688.3	chr10	-	2240	9	novel_in_catalog	NSMCE4A	novel	1394	11	NA	NA	0	-3	intron_retention	FALSE	canonical	1	393058	junction_8	89110.11990991469	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	53	1048	30.0	-24	True	ATTAAA	-23
PB.1688.1	chr10	-	1270	10	novel_in_catalog	NSMCE4A	novel	1394	11	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	23150	junction_2	180691.09598550905	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	29	1036	25.0	0	True	ATTAAA	-24
PB.1688.4	chr10	-	1993	4	incomplete-splice_match	NSMCE4A	ENST00000369017.5	1224	7	-16	4603	6	-1017	3prime_fragment	FALSE	canonical	1	393058	junction_3	73978.69132992884	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	46	702	5.0	-17	True	AATGAA	-14
PB.521.9	chr1	-	2142	2	full-splice_match	RBMXL1	ENST00000321792.5	4799	2	141	2516	128	1379	multi-exon	FALSE	canonical	1	32595	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	288	1460	45.0	-3	True	AATAAA	-11
PB.2130.9	chr11	+	3860	3	novel_in_catalog	CCND1	novel	4307	5	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	7841	junction_1	751262.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	296	670	5.0	0	True	AATAAA	-14
PB.12378.1	chrY	-	4004	2	full-splice_match	ZBED1	ENST00000381223.9_PAR_Y	4510	2	-5	511	-5	57	multi-exon	FALSE	canonical	1	11	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	694	2085	210	2294	30.0	NA	False	NA	NA
PB.1234.11	chr1	-	6686	19	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-30	0	intron_retention	TRUE	non_canonical	0	0	junction_15	152561.06981103958	NA	2	NA	TRUE	NA	NA	NA	B	coding	1469	4410	257	4666	35.0	-8	True	AATAAA	-17
PB.2813.30	chr12	+	2374	13	novel_in_catalog	VEZT	novel	571	6	NA	NA	1	-8	intron_retention	FALSE	canonical	1	12284	junction_2	145834.28541213027	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2349	25	2373	70.0	16	True	NA	NA
PB.2772.3	chr12	-	7223	24	full-splice_match	OSBPL8	ENST00000261183.7	7239	24	7	9	3	-9	multi-exon	FALSE	canonical	1	81870	junction_21	133303.310076394	NA	4	NA	TRUE	NA	NA	NA	C	coding	889	2670	474	3143	50.0	5	True	AATAAA	-7
PB.2130.1	chr11	+	4021	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	285	1	141	-1	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	33	830	5.0	-6706	False	AATAAA	-15
PB.7517.3	chr21	+	2894	25	novel_in_catalog	TTC3	novel	769	9	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	95036.4627283388	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2658	236	2893	75.0	-7923	False	NA	NA
PB.2130.3	chr11	+	1933	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	63	2311	-15	756	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	165	1052	15.0	-6	True	AATATA	-22
PB.2130.2	chr11	+	4005	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	-13	315	-13	-315	multi-exon	TRUE	canonical	1	1510366	junction_4	260609.229677668	NA	4	NA	TRUE	NA	NA	NA	C	coding	295	888	241	1128	15.0	-7004	False	NA	NA
PB.2130.5	chr11	+	1461	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	67	2779	-11	288	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	161	1048	75.0	-2	True	NA	NA
PB.12378.3	chrX	-	2730	2	full-splice_match	ZBED1	ENST00000461691.6	947	2	-79	-1704	-7	-15	multi-exon	FALSE	canonical	1	195	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	212	2296	75.0	1	True	NA	NA
PB.2130.7	chr11	+	1223	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	69	3015	-9	52	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	159	1046	65.0	0	True	NA	NA
PB.2130.6	chr11	+	3717	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	69	521	-9	-521	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	159	1046	50.0	0	True	NA	NA
PB.12378.2	chrX	-	3179	2	full-splice_match	ZBED1	ENST00000381223.9	4510	2	-8	1339	-8	433	multi-exon	FALSE	canonical	1	195	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	213	2297	75.0	0	True	NA	NA
PB.5167.1	chr17	+	3155	21	novel_in_catalog	TLK2	novel	3608	23	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	44	junction_18	29783.453809581926	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	75	2231	15.0	NA	False	AATAAA	-18
PB.5167.2	chr17	+	3242	22	full-splice_match	TLK2	ENST00000346027.9	3449	22	205	2	-16	-1	multi-exon	FALSE	canonical	1	44	junction_19	28350.63373369352	NA	2	1	TRUE	NA	NA	NA	C	coding	750	2253	67	2319	10.0	NA	False	AATAAA	-17
PB.5167.3	chr17	+	3411	22	novel_in_catalog	TLK2	novel	3608	23	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	44	junction_19	28427.534863370816	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	60	2312	20.0	NA	False	ATTAAA	-16
PB.11789.12	chr9	-	2440	8	novel_not_in_catalog	HSPA5	novel	3908	8	NA	NA	-12	-1388	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	1630283.3428919963	NA	3	1	TRUE	NA	NA	NA	C	coding	459	1380	710	2089	25.0	0	True	AATAAA	-20
PB.11789.10	chr9	-	2623	7	novel_in_catalog	HSPA5	novel	3908	8	NA	NA	-13	-1387	intron_retention	FALSE	canonical	1	2174427	junction_2	1020749.7920058569	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	1093	2271	25.0	-1	True	AATAAA	-21
PB.11789.11	chr9	-	2912	7	novel_in_catalog	HSPA5	novel	3908	8	NA	NA	-26	-1388	intron_retention	FALSE	canonical	1	2174427	junction_2	1025106.7753955221	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	1038	2561	25.0	-14	False	AATAAA	-20
PB.11789.16	chr9	-	2012	8	full-splice_match	HSPA5	ENST00000324460.6	3908	8	-13	1909	-13	-1909	multi-exon	FALSE	canonical	1	2174427	junction_2	999659.513985494	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1794	218	2011	45.0	-1	True	AAAAAG	-7
PB.9273.4	chr5	+	1899	17	novel_in_catalog	GTF2H2C	novel	832	8	NA	NA	1	-115	combination_of_known_junctions	FALSE	canonical	1	1693	junction_15	64647.4679260526	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	165	1352	55.0	NA	False	NA	NA
PB.11789.14	chr9	-	3512	7	novel_in_catalog	HSPA5	novel	3908	8	NA	NA	-13	-1395	intron_retention	FALSE	canonical	1	2174427	junction_1	865105.654961433	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	218	1660	20.0	-1	True	AATAAA	-13
PB.12378.4	chrX	-	2578	2	full-splice_match	ZBED1	ENST00000461691.6	947	2	-81	-1550	-9	-169	multi-exon	FALSE	canonical	1	195	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	214	2298	65.0	-1	True	NA	NA
PB.1234.10	chr1	-	6769	19	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_15	149174.48575477183	NA	7	NA	TRUE	NA	NA	NA	B	coding	1496	4491	259	4749	35.0	-3	True	AATAAA	-17
PB.456.2	chr1	+	1702	1	novel_in_catalog	DNAJC6	novel	546	5	NA	NA	-2	-108600	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	77	234	76	309	45.0	-2	True	AATAAA	-16
PB.456.1	chr1	+	5171	19	novel_in_catalog	DNAJC6	novel	546	5	NA	NA	-19	-7	combination_of_known_junctions	FALSE	canonical	1	37764	junction_1	44408.39827799787	NA	0	NA	TRUE	NA	NA	NA	B	coding	944	2835	93	2927	50.0	-19	True	ATTAAA	-7
PB.5423.11	chr18	+	2503	19	incomplete-splice_match	RMC1	ENST00000269221.7	2162	20	305	4	279	0	5prime_fragment	FALSE	non_canonical	0	0	junction_10	97209.45817426384	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	636	2429	45.0	243	False	AATAAA	-15
PB.5423.10	chr18	+	2286	20	novel_not_in_catalog	RMC1	novel	1958	18	NA	NA	4	1374	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	115041.56501825945	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	96	2036	15.0	13	True	AATAAA	-19
PB.6419.11	chr2	-	2004	3	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	-25	624	no_combination_of_known_junctions	FALSE	canonical	1	51261	junction_2	82340.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	144	435	809	1243	90.0	-1	True	NA	NA
PB.6419.10	chr2	-	3182	17	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	16	2	no_combination_of_known_junctions	FALSE	canonical	1	51261	junction_16	68813.55865023531	NA	0	NA	TRUE	NA	NA	NA	B	coding	805	2415	768	3182	100.0	-21	True	NA	NA
PB.11861.14	chr9	+	9062	30	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	-2	-12	intron_retention	FALSE	canonical	1	82105	junction_15	177117.31438199544	NA	1	NA	TRUE	NA	NA	NA	C	coding	1476	4431	229	4659	55.0	-15	True	AATAAA	-8
PB.10716.1	chr7	+	3517	14	novel_in_catalog	AP4M1	novel	813	7	NA	NA	-10	-17	no_combination_of_known_junctions	FALSE	canonical	1	3239	junction_12	64599.771518364156	NA	0	NA	TRUE	NA	NA	NA	A	coding	436	1311	67	1377	80.0	1	True	NA	NA
PB.11861.16	chr9	+	7266	31	novel_not_in_catalog	PRRC2B	novel	266	2	NA	NA	13	452	any annotated donor/acceptor	FALSE	canonical	1	30413	junction_1	169474.55114911962	NA	8	1	TRUE	NA	NA	NA	C	coding	2170	6513	210	6722	70.0	0	True	TTTAAA	-29
PB.3162.13	chr13	+	3633	25	novel_in_catalog	FNDC3A	novel	6286	26	NA	NA	5	-2173	combination_of_known_junctions	FALSE	canonical	1	9071	junction_22	108975.46476245334	NA	1	1	TRUE	NA	NA	NA	C	coding	989	2970	83	3052	25.0	1	True	AATATA	-19
PB.3162.12	chr13	+	3559	24	full-splice_match	FNDC3A	ENST00000398316.7	5714	24	4	2151	4	-2151	multi-exon	FALSE	canonical	1	138476	junction_1	65069.45237426956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1142	3429	84	3512	35.0	0	True	AATATA	-41
PB.3162.11	chr13	+	4289	24	full-splice_match	FNDC3A	ENST00000398316.7	5714	24	4	1421	4	-1421	multi-exon	FALSE	canonical	1	138476	junction_1	65069.45237426956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1142	3429	84	3512	5.0	0	True	AGTAAA	-15
PB.3162.10	chr13	+	5897	24	full-splice_match	FNDC3A	ENST00000398316.7	5714	24	1	-184	1	-1	multi-exon	FALSE	canonical	1	138476	junction_1	65069.45237426956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1142	3429	87	3515	20.0	-3	True	AATAAA	-17
PB.3162.17	chr13	+	5143	21	incomplete-splice_match	FNDC3A	ENST00000398316.7	5714	24	26179	2	26179	-2	5prime_fragment	FALSE	canonical	1	271302	junction_3	51974.14822111085	NA	13	2	TRUE	NA	NA	NA	C	coding	858	2577	371	2947	25.0	NA	False	AATAAA	-19
PB.2234.3	chr11	+	4365	2	full-splice_match	ENDOD1	ENST00000278505.4	4687	2	324	-2	324	2	multi-exon	FALSE	canonical	1	175107	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	290	1297	30.0	-6120	False	AATAAA	-17
PB.3162.15	chr13	+	4813	24	full-splice_match	FNDC3A	ENST00000398316.7	5714	24	22	879	22	-879	multi-exon	FALSE	canonical	1	138476	junction_1	65069.45237426956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1142	3429	66	3494	30.0	18	True	AATACA	-20
PB.3162.14	chr13	+	5805	25	novel_not_in_catalog	FNDC3A	novel	6286	26	NA	NA	5	3	any annotated donor/acceptor	FALSE	canonical	1	8787	junction_22	109007.78236494523	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	83	3604	30.0	1	True	AATAAA	-24
PB.4180.8	chr16	+	3105	10	novel_in_catalog	AC093525.1	novel	596	4	NA	NA	6416	3460	intron_retention	FALSE	canonical	1	20500	junction_3	70218.67257958888	NA	0	NA	TRUE	NA	NA	NA	B	coding	173	522	732	1253	25.0	-16	True	NA	NA
PB.4180.9	chr16	+	3173	9	novel_in_catalog	AC093525.1	novel	596	4	NA	NA	6443	3465	intron_retention	FALSE	canonical	1	20500	junction_3	73234.7063296324	NA	0	NA	TRUE	NA	NA	NA	B	coding	203	612	705	1316	30.0	11	True	NA	NA
PB.7188.1	chr20	+	3917	11	novel_in_catalog	PET117	novel	1141	2	NA	NA	-24	45202	no_combination_of_known_junctions	FALSE	canonical	1	73406	junction_5	55987.81011300585	NA	0	NA	TRUE	NA	NA	NA	B	coding	782	2349	657	3005	30.0	-24	True	AATAAA	-21
PB.8751.8	chr4	-	4067	6	novel_in_catalog	RBM47	novel	4816	6	NA	NA	-85	-71	combination_of_known_junctions	FALSE	canonical	1	3434	junction_5	91714.84629000913	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	341	1915	70.0	676	False	NA	NA
PB.4180.2	chr16	+	1599	10	full-splice_match	AMDHD2	ENST00000302956.8	3273	10	-18	1692	-10	32	multi-exon	TRUE	canonical	1	122877	junction_1	41586.17132629844	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	113	1432	5.0	-50	True	GATAAA	-16
PB.4180.3	chr16	+	3118	10	full-splice_match	AMDHD2	ENST00000648227.1	2890	10	-46	-182	-6	-10	multi-exon	FALSE	canonical	1	22669	junction_8	68568.20777792389	NA	15	NA	TRUE	NA	NA	NA	C	coding	386	1161	109	1269	20.0	-46	True	NA	NA
PB.8751.4	chr4	-	4446	8	novel_in_catalog	RBM47	novel	4816	6	NA	NA	-17	-71	combination_of_known_junctions	FALSE	canonical	1	42225	junction_6	84910.84117292607	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	513	2294	70.0	-8	True	NA	NA
PB.4180.1	chr16	+	3136	11	full-splice_match	AMDHD2	ENST00000293971.10	1459	11	13	-1690	-12	-34	multi-exon	FALSE	canonical	1	122877	junction_1	42952.49714754661	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	82	1311	70.0	-19	True	NA	NA
PB.4180.6	chr16	+	1484	11	full-splice_match	AMDHD2	ENST00000293971.10	1459	11	7	-32	7	32	multi-exon	FALSE	canonical	1	122877	junction_1	42952.49714754661	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	88	1317	5.0	-25	True	GATAAA	-16
PB.4180.7	chr16	+	3550	10	incomplete-splice_match	AMDHD2	ENST00000293971.10	1459	11	11	-1723	11	-1	intron_retention	FALSE	canonical	1	122877	junction_1	42108.69005881251	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	84	1271	30.0	-21	True	NA	NA
PB.4180.4	chr16	+	3293	10	full-splice_match	AMDHD2	ENST00000302956.8	3273	10	-5	-15	3	15	multi-exon	FALSE	canonical	1	122877	junction_1	41586.17132629844	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	100	1419	25.0	-37	True	NA	NA
PB.4180.5	chr16	+	3452	10	novel_in_catalog	AC093525.1	novel	596	4	NA	NA	6398	3459	intron_retention	FALSE	canonical	1	122877	junction_1	45234.41627405311	NA	0	NA	TRUE	NA	NA	NA	B	coding	348	1047	97	1143	25.0	-34	True	NA	NA
PB.536.3	chr1	-	1906	19	novel_not_in_catalog	GLMN	novel	1995	19	NA	NA	3	-24	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	52662.551304989174	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	609	1892	75.0	13	True	GATAAA	-19
PB.513.1	chr1	-	4278	43	novel_not_in_catalog	COL24A1	novel	6825	60	NA	NA	163880	-6	any annotated donor/acceptor	TRUE	canonical	1	3265	junction_42	8680.649277810604	NA	0	NA	TRUE	NA	NA	NA	B	coding	850	2553	419	2971	30.0	-4	True	AATAAA	-11
PB.11670.1	chr9	-	5192	6	novel_not_in_catalog	ZNF782	novel	4213	6	NA	NA	-26	968	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	16584.221259980826	NA	3	1	TRUE	NA	NA	NA	C	coding	694	2085	689	2773	65.0	-9	True	NA	NA
PB.8444.2	chr3	-	8098	47	full-splice_match	ATR	ENST00000350721.8	8249	47	77	74	-25	-73	multi-exon	FALSE	canonical	1	65804	junction_37	37288.69369954552	NA	0	NA	TRUE	NA	NA	NA	C	coding	2644	7935	46	7980	25.0	-27	True	CATAAA	-22
PB.10109.5	chr6	-	2352	3	full-splice_match	LYRM2	ENST00000523377.1	5353	3	6	2995	2	-412	multi-exon	FALSE	canonical	1	124383	junction_1	127670.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AGTAAA	-19
PB.10109.4	chr6	-	3366	3	full-splice_match	LYRM2	ENST00000520318.1	677	3	1	-2690	1	584	multi-exon	FALSE	canonical	1	109914	junction_1	134905.0	NA	10	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	CATAAA	-30
PB.10109.6	chr6	-	1434	3	full-splice_match	LYRM2	ENST00000523377.1	5353	3	8	3911	4	722	multi-exon	FALSE	canonical	1	124383	junction_1	127670.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	NA	NA
PB.10109.1	chr6	-	3816	3	full-splice_match	LYRM2	ENST00000523075.1	608	3	-4	-3204	-4	963	multi-exon	FALSE	canonical	1	18715	junction_2	52834.0	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	310	False	AATAAA	-15
PB.10109.3	chr6	-	3285	3	full-splice_match	LYRM2	ENST00000523377.1	5353	3	5	2063	1	520	multi-exon	FALSE	canonical	1	124383	junction_1	127670.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	AATAAA	-6
PB.10109.2	chr6	-	3727	3	full-splice_match	LYRM2	ENST00000523377.1	5353	3	5	1621	1	962	multi-exon	FALSE	canonical	1	124383	junction_1	127670.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	AATAAA	-14
PB.8519.4	chr3	-	5623	27	novel_in_catalog	PLD1	novel	694	3	NA	NA	13	-37	intron_retention	FALSE	canonical	1	17429	junction_26	30311.862458225667	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	184	3408	50.0	-21	True	NA	NA
PB.8519.5	chr3	-	5568	27	full-splice_match	PLD1	ENST00000351298.8	5604	27	32	4	0	-4	multi-exon	FALSE	canonical	1	33576	junction_11	26456.684381485495	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	96	3320	45.0	1	True	AATGAA	-4
PB.8519.6	chr3	-	5555	26	novel_in_catalog	PLD1	novel	694	3	NA	NA	0	-4	intron_retention	FALSE	canonical	1	17429	junction_25	26699.16353038799	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	197	3307	45.0	6408	False	AATGAA	-4
PB.8519.7	chr3	-	5486	26	full-splice_match	PLD1	ENST00000356327.9	5855	26	-56	425	0	-4	multi-exon	FALSE	canonical	1	54243	junction_11	21743.961991725428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	128	3238	45.0	841	False	AATGAA	-4
PB.11125.7	chr8	+	2416	5	full-splice_match	UBE2V2	ENST00000521346.5	1322	5	13	-1107	-10	1017	multi-exon	FALSE	canonical	1	5776	junction_1	418424.46509913827	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	340	657	95.0	1	True	NA	NA
PB.8519.1	chr3	-	6015	27	full-splice_match	PLD1	ENST00000351298.8	5604	27	12	-423	12	2	multi-exon	TRUE	canonical	1	33576	junction_11	26456.684381485495	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	116	3340	25.0	-19	True	TATAAA	-16
PB.8519.2	chr3	-	5878	26	full-splice_match	PLD1	ENST00000356327.9	5855	26	-24	1	0	-1	multi-exon	FALSE	canonical	1	54243	junction_11	21743.961991725428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	96	3206	20.0	1	True	TATAAA	-13
PB.509.2	chr1	-	2706	3	full-splice_match	BCL10	ENST00000648566.1	2833	3	122	5	-54	-5	multi-exon	FALSE	canonical	1	243447	junction_2	26357.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	159	860	25.0	34	True	AATAAA	-13
PB.1388.9	chr10	+	2606	11	novel_not_in_catalog	RASSF4	novel	4350	10	NA	NA	-18	5	any annotated donor/acceptor	FALSE	canonical	1	4896	junction_4	93747.78387892697	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	132	1223	45.0	-28	True	AATAAA	-20
PB.1388.8	chr10	+	4079	10	novel_in_catalog	RASSF4	novel	4350	10	NA	NA	-18	15	intron_retention	FALSE	canonical	1	32695	junction_3	90852.08059257641	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	1547	2686	20.0	-28	True	AATAAA	-30
PB.1388.3	chr10	+	2523	11	novel_not_in_catalog	RASSF4	novel	4350	10	NA	NA	-30	5	any annotated donor/acceptor	FALSE	canonical	1	13490	junction_4	91396.92935657084	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	583	1140	45.0	-40	True	AATAAA	-20
PB.1388.2	chr10	+	4015	10	full-splice_match	RASSF4	ENST00000489171.5	4350	10	350	-15	-35	15	multi-exon	FALSE	canonical	1	148187	junction_3	60150.506401817285	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	1564	2622	20.0	-45	False	AATAAA	-30
PB.1388.1	chr10	+	2595	11	novel_in_catalog	RASSF4	novel	4350	10	NA	NA	-51	6	combination_of_known_junctions	FALSE	canonical	1	32695	junction_4	86190.48166334842	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	165	1211	40.0	-61	False	AATAAA	-21
PB.1388.7	chr10	+	2481	11	full-splice_match	RASSF4	ENST00000340258.9	3641	11	-19	1179	-19	5	multi-exon	FALSE	canonical	1	148187	junction_4	57172.25215994206	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	133	1098	45.0	-29	True	AATAAA	-20
PB.1388.6	chr10	+	3845	9	novel_in_catalog	RASSF4	novel	4350	10	NA	NA	-19	4	intron_retention	FALSE	canonical	1	6423	junction_2	104256.13768315694	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	1906	2463	45.0	-29	True	AATAAA	-19
PB.1388.5	chr10	+	2500	9	incomplete-splice_match	RASSF4	ENST00000489171.5	4350	10	362	2754	-23	-7	3prime_fragment	FALSE	canonical	1	148187	junction_3	60969.4856638087	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	948	1552	2499	70.0	-33	True	NA	NA
PB.1388.4	chr10	+	4166	12	novel_not_in_catalog	RASSF4	novel	4350	10	NA	NA	-26	5	intron_retention	FALSE	canonical	1	514	junction_8	133075.77997517053	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1555	2340	45.0	-36	True	AATAAA	-20
PB.4583.1	chr16	-	4979	9	novel_not_in_catalog	TLDC1	novel	5046	8	NA	NA	7	65	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	56292.21167252513	NA	7	NA	TRUE	NA	NA	NA	B	coding	456	1371	109	1479	50.0	-33	False	NA	NA
PB.11054.5	chr8	+	3224	11	full-splice_match	ESCO2	ENST00000305188.12	3922	11	162	536	-6	-536	multi-exon	FALSE	canonical	1	86831	junction_1	20774.16344982392	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	77	1882	35.0	-6	True	ATTAAA	-17
PB.4583.3	chr16	-	3255	9	novel_not_in_catalog	TLDC1	novel	5046	8	NA	NA	13	1623	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56292.21167252513	NA	0	NA	TRUE	NA	NA	NA	B	coding	456	1371	103	1473	45.0	-27	True	ATTAAA	-21
PB.4583.2	chr16	-	3424	10	novel_not_in_catalog	TLDC1	novel	5046	8	NA	NA	0	1637	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	59636.251320654344	NA	1	NA	TRUE	NA	NA	NA	B	coding	456	1371	258	1628	65.0	-40	False	ATTAAA	-35
PB.4583.5	chr16	-	2910	9	novel_not_in_catalog	TLDC1	novel	5046	8	NA	NA	0	1265	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56292.21167252513	NA	0	NA	TRUE	NA	NA	NA	B	coding	494	1485	2	1486	15.0	-40	False	AGTAAA	-19
PB.4583.4	chr16	-	2995	10	novel_not_in_catalog	TLDC1	novel	5046	8	NA	NA	3	1265	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	57207.043876703785	NA	0	NA	TRUE	NA	NA	NA	B	coding	456	1371	201	1571	15.0	-3	True	AGTAAA	-19
PB.4583.6	chr16	-	1870	9	novel_in_catalog	TLDC1	novel	5046	8	NA	NA	-1	56	combination_of_known_junctions	FALSE	canonical	1	9286	junction_8	49820.4435968559	NA	0	NA	TRUE	NA	NA	NA	B	coding	456	1371	228	1598	25.0	-10	True	AAGAAA	-18
PB.10115.6	chr6	+	2836	5	full-splice_match	MANEA	ENST00000358812.8	4575	5	-7	1746	-7	1688	multi-exon	FALSE	canonical	1	99871	junction_1	20270.746532873425	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	142	1530	65.0	-7	True	AATAAA	-8
PB.10115.4	chr6	+	1931	5	full-splice_match	MANEA	ENST00000358812.8	4575	5	-13	2657	-13	777	multi-exon	FALSE	canonical	1	99871	junction_1	20270.746532873425	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	148	1536	65.0	-13	True	AATAAA	-33
PB.12073.1	chrX	-	3303	10	full-splice_match	TFE3	ENST00000315869.7	3415	10	113	-1	37	1	multi-exon	FALSE	canonical	1	311897	junction_8	137312.24529552623	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	148	1875	20.0	12	True	AATAAA	-34
PB.10115.2	chr6	+	4590	5	full-splice_match	MANEA	ENST00000358812.8	4575	5	-17	2	-17	-2	multi-exon	FALSE	canonical	1	99871	junction_1	20270.746532873425	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	152	1540	40.0	-17	True	AATAAA	-26
PB.10115.3	chr6	+	3040	5	full-splice_match	MANEA	ENST00000358812.8	4575	5	-35	1570	-35	-1570	multi-exon	FALSE	canonical	1	99871	junction_1	20270.746532873425	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	170	1558	65.0	-35	True	TATAAA	-29
PB.10115.1	chr6	+	3481	5	full-splice_match	MANEA	ENST00000358812.8	4575	5	-72	1166	-72	-1166	multi-exon	FALSE	canonical	1	99871	junction_1	20270.746532873425	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	207	1595	30.0	-72	True	ATTAAA	-17
PB.11054.6	chr8	+	1491	9	incomplete-splice_match	ESCO2	ENST00000305188.12	3922	11	165	12584	-3	-6869	3prime_fragment	FALSE	canonical	1	86831	junction_1	22997.522071681982	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1416	74	1489	60.0	-3	True	AATGAA	-33
PB.949.6	chr1	+	1576	6	full-splice_match	CACYBP	ENST00000367679.6	2766	6	280	910	58	721	multi-exon	FALSE	canonical	1	783	junction_2	169895.48244894564	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	169	855	35.0	-38	True	AATAAA	-19
PB.4492.1	chr16	-	1505	12	full-splice_match	ACD	ENST00000620761.5	1476	12	-27	-2	-1	-1	multi-exon	TRUE	canonical	1	268664	junction_9	45051.89318868073	NA	0	NA	TRUE	NA	NA	NA	A	coding	458	1377	53	1429	35.0	7135	False	AATAAA	-19
PB.9290.3	chr5	-	1751	9	full-splice_match	ANKRA2	ENST00000296785.7	2063	9	310	2	20	-2	multi-exon	FALSE	canonical	1	155698	junction_8	28755.986932887125	NA	2	1	TRUE	NA	NA	NA	C	coding	313	942	350	1291	20.0	16	True	AATAAA	-18
PB.9793.1	chr6	+	2139	1	full-splice_match	HIST1H4E	ENST00000615164.2	1487	1	58	-710	58	710	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	103	312	36	347	90.0	0	True	NA	NA
PB.8589.16	chr3	+	4930	4	incomplete-splice_match	ST6GAL1	ENST00000448044.5	4302	7	-1	23314	0	3700	3prime_fragment	FALSE	canonical	1	87733	junction_1	237182.54333506268	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	333	1094	70.0	0	True	NA	NA
PB.12127.4	chrX	-	2276	4	full-splice_match	SNX12	ENST00000374274.7	2376	4	97	3	-3	0	multi-exon	FALSE	canonical	1	505923	junction_3	59973.688881041824	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	21	509	10.0	7	True	ATTAAA	-13
PB.12127.2	chrX	-	3221	4	full-splice_match	SNX12	ENST00000374274.7	2376	4	-4	-841	-4	839	multi-exon	FALSE	canonical	1	505923	junction_3	59973.688881041824	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	122	610	85.0	-17	True	NA	NA
PB.12127.1	chrX	-	2683	5	novel_not_in_catalog	SOCS5P4	novel	1566	3	NA	NA	-22934	15895	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	261012.1268594383	NA	1	NA	TRUE	NA	NA	NA	A	coding	212	639	99	737	10.0	6	True	NA	NA
PB.9032.7	chr4	+	3465	10	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-16	-15	combination_of_known_junctions	FALSE	canonical	1	6833	junction_3	87519.27736571689	NA	2	NA	TRUE	NA	NA	NA	C	coding	633	1902	183	2084	95.0	-17	True	NA	NA
PB.9032.6	chr4	+	6770	12	full-splice_match	TRIM2	ENST00000338700.9	6735	12	-36	1	-16	-1	multi-exon	FALSE	canonical	1	41081	junction_1	59920.44117048969	NA	3	NA	TRUE	NA	NA	NA	C	coding	771	2316	102	2417	30.0	-17	True	AATAAA	-17
PB.9032.5	chr4	+	6436	10	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-18	-4	combination_of_known_junctions	FALSE	canonical	1	6833	junction_3	87519.27736571689	NA	4	NA	TRUE	NA	NA	NA	C	coding	660	1983	104	2086	35.0	-19	True	AATAAA	-14
PB.9032.4	chr4	+	3031	18	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-30	75675	no_combination_of_known_junctions	TRUE	canonical	1	2226	junction_11	80537.9071566275	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	197	2893	15.0	-31	True	AATAAA	-12
PB.9032.3	chr4	+	3627	11	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-30	-15	no_combination_of_known_junctions	FALSE	canonical	1	1586	junction_1	69644.12556562111	NA	2	NA	TRUE	NA	NA	NA	C	coding	703	2112	135	2246	95.0	-31	True	NA	NA
PB.9032.2	chr4	+	4609	13	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-30	-15	combination_of_known_junctions	FALSE	canonical	1	1854	junction_1	79663.47774004652	NA	2	NA	TRUE	NA	NA	NA	C	coding	744	2235	994	3228	95.0	-31	True	NA	NA
PB.9032.1	chr4	+	2804	12	full-splice_match	TRIM2	ENST00000338700.9	6735	12	-52	3983	-32	-1025	multi-exon	TRUE	canonical	1	41081	junction_1	59920.44117048969	NA	1	NA	TRUE	NA	NA	NA	C	coding	744	2235	199	2433	80.0	-33	True	NA	NA
PB.11495.13	chr9	-	2800	17	novel_in_catalog	DDX58	novel	4089	17	NA	NA	-4	-1306	no_combination_of_known_junctions	FALSE	canonical	1	1623	junction_16	71799.39620608653	NA	1	NA	TRUE	NA	NA	NA	C	coding	880	2643	47	2689	40.0	-18	True	AATATA	-6
PB.8904.32	chr4	-	1517	8	full-splice_match	UBE2D3	ENST00000394803.9	2227	8	95	615	0	-457	multi-exon	FALSE	canonical	1	151175	junction_6	406515.0073236998	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	250	693	20.0	-3	True	AATAAA	-14
PB.8904.33	chr4	-	1721	8	full-splice_match	UBE2D3	ENST00000394801.8	2368	8	31	616	31	-458	multi-exon	FALSE	canonical	1	151175	junction_6	393001.72078711394	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	455	898	25.0	266	False	AATAAA	-13
PB.8904.31	chr4	-	1443	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	267	2280	6	488	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	248	691	40.0	5	True	AATAAA	-15
PB.8904.36	chr4	-	1347	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	207	2436	-39	332	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	308	751	50.0	578	False	AATAAA	-28
PB.10104.6	chr6	+	4075	8	novel_not_in_catalog	PM20D2	novel	4708	7	NA	NA	40	-643	any annotated donor/acceptor	FALSE	canonical	1	13446	junction_1	97765.71236358474	NA	3	NA	TRUE	NA	NA	NA	C	coding	250	753	664	1416	100.0	0	True	AATAAA	-23
PB.8904.34	chr4	-	2515	7	full-splice_match	UBE2D3	ENST00000503742.5	1977	7	21	-559	6	-458	multi-exon	FALSE	canonical	1	151175	junction_5	440092.9472750299	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	5	True	AATAAA	-13
PB.9032.8	chr4	+	3747	12	novel_not_in_catalog	TRIM2	novel	583	4	NA	NA	-15	-15	any annotated donor/acceptor	FALSE	canonical	1	4570	junction_2	78526.30203350882	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	507	2366	95.0	-16	True	NA	NA
PB.5187.61	chr17	-	2645	12	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	33156	junction_1	1916517.3690740138	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	171	1529	40.0	-1	True	AATAAA	-43
PB.5187.63	chr17	-	1220	9	incomplete-splice_match	DDX5	ENST00000581230.5	3558	12	0	2867	0	102	3prime_fragment	FALSE	canonical	1	5032484	junction_8	710788.2169621624	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1050	171	1220	45.0	-1	True	AATAAA	-22
PB.5187.62	chr17	-	1425	9	incomplete-splice_match	DDX5	ENST00000581230.5	3558	12	0	2662	0	-208	3prime_fragment	FALSE	canonical	1	5032484	junction_8	710788.2169621624	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	171	1274	20.0	-1	True	ATTAAA	-31
PB.7584.9	chr22	+	6552	2	intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	24	NA	FALSE	NA	NA	NA	A	coding	127	384	5486	5869	65.0	NA	False	AATATA	-43
PB.7584.8	chr22	+	2322	7	intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	A	coding	105	318	1830	2147	30.0	NA	False	NA	NA
PB.7584.7	chr22	+	1797	6	intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	11	2	FALSE	NA	NA	NA	A	coding	92	279	132	410	30.0	NA	False	AATAAA	-16
PB.7584.6	chr22	+	1989	7	intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	12	2	FALSE	NA	NA	NA	A	coding	92	279	132	410	30.0	NA	False	AATAAA	-16
PB.7584.5	chr22	+	2102	1	intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	AATAAA	-38
PB.7584.4	chr22	+	1852	7	intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-16
PB.3695.2	chr14	-	2770	15	full-splice_match	AKT1	ENST00000649815.1	2742	15	-9	-19	-9	0	multi-exon	FALSE	canonical	1	12538	junction_14	651597.530011746	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	339	1781	20.0	5387	False	AATAAA	-12
PB.3695.3	chr14	-	2584	14	full-splice_match	AKT1	ENST00000407796.6	2710	14	123	3	-1	0	multi-exon	FALSE	canonical	1	91672	junction_13	559746.127905876	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	153	1595	20.0	5395	False	AATAAA	-12
PB.7584.1	chr22	+	1790	4	intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.3695.1	chr14	-	2904	13	novel_in_catalog	AKT1	novel	3916	13	NA	NA	10	0	intron_retention	FALSE	canonical	1	91672	junction_12	578369.1817458414	NA	9	NA	TRUE	NA	NA	NA	C	coding	276	831	142	972	20.0	5406	False	AATAAA	-12
PB.12137.1	chrX	-	4224	2	full-splice_match	ERCC6L	ENST00000334463.3	4243	2	20	-1	0	1	multi-exon	FALSE	canonical	1	45591	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1250	3753	117	3869	15.0	-43	True	ATTAAA	-21
PB.12137.2	chrX	-	4342	3	full-splice_match	ERCC6L	ENST00000373657.2	4344	3	-8	10	-8	-7	multi-exon	FALSE	canonical	1	4323	junction_2	10.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1127	3384	612	3995	20.0	-51	True	ATTAAA	-13
PB.5508.10	chr18	-	3247	2	novel_not_in_catalog	BCL2	novel	7461	2	NA	NA	3607	1332	any annotated donor/acceptor	FALSE	canonical	1	14960	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	1377	1715	5.0	-9	True	TATAAA	-14
PB.11495.15	chr9	-	2548	17	novel_in_catalog	DDX58	novel	4089	17	NA	NA	-26300	-10654	no_combination_of_known_junctions	FALSE	canonical	1	8048	junction_15	83248.10608722204	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2118	431	2548	65.0	-39	True	AATAAA	-8
PB.142.2	chr1	-	2432	4	full-splice_match	MUL1	ENST00000264198.4	2438	4	4	2	4	-2	multi-exon	FALSE	canonical	1	206592	junction_3	48066.94513095483	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	134	1192	15.0	-23	True	ATTAAA	-13
PB.5508.13	chr18	-	3752	3	full-splice_match	BCL2	ENST00000333681.4	3209	3	-303	-240	39	240	multi-exon	FALSE	canonical	1	122770	junction_2	5243.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	239	720	1203	1922	15.0	-35	True	AATACA	-15
PB.11785.4	chr9	+	5603	3	full-splice_match	ARPC5L	ENST00000465124.1	1877	3	-3395	-331	-11	-1	multi-exon	FALSE	canonical	1	1024794	junction_2	26789.0	NA	41	NA	TRUE	NA	NA	NA	C	coding	101	306	4506	4811	30.0	0	True	AATAAA	-22
PB.11785.5	chr9	+	1902	3	full-splice_match	ARPC5L	ENST00000465124.1	1877	3	-13	-12	-13	12	multi-exon	FALSE	canonical	1	1024794	junction_2	26789.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	101	306	1124	1429	10.0	-1406	False	AATAAA	-21
PB.11785.6	chr9	+	1763	3	full-splice_match	ARPC5L	ENST00000465124.1	1877	3	443	-329	443	-3	multi-exon	FALSE	canonical	1	1024794	junction_2	26789.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	668	973	30.0	-950	False	AATAAA	-20
PB.11785.1	chr9	+	1411	4	novel_not_in_catalog	ARPC5L	novel	2507	6	NA	NA	-71	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	496203.3090157926	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	158	619	30.0	-60	True	AATAAA	-22
PB.11785.2	chr9	+	1077	4	novel_not_in_catalog	ARPC5L	novel	2507	6	NA	NA	-54	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	496203.3090157926	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	141	602	5.0	-43	True	AATAAA	-23
PB.11785.3	chr9	+	5321	3	full-splice_match	ARPC5L	ENST00000465124.1	1877	3	-3431	-13	-47	13	multi-exon	FALSE	canonical	1	1024794	junction_2	26789.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	4542	4847	10.0	-36	True	AATAAA	-22
PB.503.1	chr1	+	1678	1	antisense	novelGene_MCOLN2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	131	396	1065	1460	15.0	-792	False	NA	NA
PB.503.2	chr1	+	2925	1	genic	WDR63	novel	NA	NA	NA	NA	-1924	-84421	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	131	396	292	687	75.0	-19	True	NA	NA
PB.8586.1	chr3	+	1272	10	full-splice_match	DNAJB11	ENST00000265028.7	1688	10	50	366	50	-360	multi-exon	FALSE	canonical	1	721199	junction_1	302014.88066678576	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	171	1247	55.0	8	True	AATAAA	-15
PB.412.3	chr1	-	2899	3	full-splice_match	COA7	ENST00000371538.4	4005	3	11	1095	11	-1095	multi-exon	FALSE	canonical	1	122628	junction_2	91614.0	NA	31	1	TRUE	NA	NA	NA	C	coding	231	696	30	725	60.0	-9	True	NA	NA
PB.9783.1	chr6	+	1207	7	full-splice_match	GMNN	ENST00000230056.7	1262	7	4	51	4	-45	multi-exon	FALSE	canonical	1	350296	junction_1	204995.78558079893	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	329	958	40.0	5	True	AATAAA	-17
PB.9783.2	chr6	+	4427	6	novel_in_catalog	GMNN	novel	1133	7	NA	NA	5	-46	intron_retention	FALSE	canonical	1	289872	junction_1	225142.33579529196	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	3631	4179	35.0	17	True	AATAAA	-16
PB.9783.3	chr6	+	4519	6	novel_in_catalog	GMNN	novel	1133	7	NA	NA	46	-45	intron_retention	FALSE	canonical	1	350296	junction_1	201806.98132225257	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	3722	4270	40.0	58	True	AATAAA	-17
PB.3218.79	chr13	-	2038	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	91	-227	no_combination_of_known_junctions	FALSE	canonical	1	8119	junction_2	105381.98686652999	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	324	1595	20.0	4	True	AATAAA	-20
PB.3218.78	chr13	-	2273	11	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-226	combination_of_known_junctions	FALSE	canonical	1	1567	junction_3	119985.5091123924	NA	5	2	TRUE	NA	NA	NA	C	coding	451	1356	428	1783	20.0	-1	True	AATAAA	-21
PB.412.5	chr1	-	1806	3	full-splice_match	COA7	ENST00000371538.4	4005	3	20	2179	20	932	multi-exon	FALSE	canonical	1	122628	junction_2	91614.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	21	716	70.0	0	True	NA	NA
PB.412.4	chr1	-	2554	3	full-splice_match	COA7	ENST00000371538.4	4005	3	19	1432	19	-1432	multi-exon	FALSE	canonical	1	122628	junction_2	91614.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	22	717	75.0	-1	True	NA	NA
PB.3218.75	chr13	-	2327	10	full-splice_match	DCT	ENST00000446125.1	2395	10	-1	69	-1	-69	multi-exon	FALSE	canonical	1	1970	junction_2	117082.22829667012	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	429	2087	40.0	-2	True	AATAAA	-13
PB.3218.74	chr13	-	2498	11	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1567	junction_3	119985.5091123924	NA	9	1	TRUE	NA	NA	NA	C	coding	451	1356	428	1783	85.0	-1	True	NA	NA
PB.3218.77	chr13	-	2438	11	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	5	-69	any annotated donor/acceptor	FALSE	canonical	1	814	junction_3	120901.94180909586	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	423	2198	40.0	4	True	AATAAA	-13
PB.3218.76	chr13	-	3473	10	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	1	-55	any annotated donor/acceptor	FALSE	canonical	1	3259	junction_3	113993.63028598475	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	427	1716	40.0	0	True	AATAAA	-27
PB.3218.71	chr13	-	2172	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	90831.2915691638	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	428	1819	85.0	-1	True	NA	NA
PB.3218.70	chr13	-	2344	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-69	no_combination_of_known_junctions	FALSE	canonical	1	899	junction_3	114360.48801643873	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	428	1669	40.0	-1	True	AATAAA	-13
PB.3218.73	chr13	-	2061	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	-1	-56	no_combination_of_known_junctions	FALSE	canonical	1	8531	junction_3	91073.43258678069	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	429	1808	35.0	-2	True	AATAAA	-26
PB.3218.72	chr13	-	2156	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	62	junction_2	93741.64760725324	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	424	1605	85.0	3	True	NA	NA
PB.8318.3	chr3	+	3505	11	full-splice_match	POGLUT1	ENST00000295588.8	3533	11	25	3	0	-3	multi-exon	FALSE	canonical	1	106226	junction_4	24979.120898062043	NA	3	NA	TRUE	NA	NA	NA	C	coding	392	1179	60	1238	30.0	0	True	AATGAA	-21
PB.9004.1	chr4	+	4185	10	full-splice_match	GAB1	ENST00000262994.8	2648	10	-11	-1526	-11	1337	multi-exon	FALSE	canonical	1	67599	junction_1	38995.44736992059	NA	1	NA	TRUE	NA	NA	NA	A	coding	694	2085	314	2398	15.0	-3	True	AATAAA	-13
PB.8318.1	chr3	+	3371	11	full-splice_match	POGLUT1	ENST00000295588.8	3533	11	19	143	-6	-143	multi-exon	FALSE	canonical	1	106226	junction_4	24979.120898062043	NA	2	NA	TRUE	NA	NA	NA	C	coding	392	1179	66	1244	25.0	-6	True	NA	NA
PB.11152.26	chr8	-	2020	14	novel_not_in_catalog	ASPH	novel	5268	25	NA	NA	9	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	808937.9471759442	NA	15	3	TRUE	NA	NA	NA	C	coding	303	912	208	1119	25.0	13	True	AATAAA	-14
PB.8318.7	chr3	+	1923	11	full-splice_match	POGLUT1	ENST00000295588.8	3533	11	48	1562	2	0	multi-exon	FALSE	canonical	1	106226	junction_4	24979.120898062043	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	37	1215	90.0	23	True	NA	NA
PB.8318.6	chr3	+	1500	11	full-splice_match	POGLUT1	ENST00000295588.8	3533	11	25	2008	0	223	multi-exon	FALSE	canonical	1	106226	junction_4	24979.120898062043	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	60	1238	30.0	0	True	NA	NA
PB.8318.5	chr3	+	2067	7	incomplete-splice_match	POGLUT1	ENST00000295588.8	3533	11	25	6506	0	-2465	3prime_fragment	FALSE	canonical	1	106226	junction_4	27094.318281493794	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	60	869	40.0	0	True	AATAAA	-26
PB.8318.4	chr3	+	2793	11	novel_not_in_catalog	POGLUT1	novel	3533	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	22	junction_4	64556.62131214737	NA	1	1	TRUE	NA	NA	NA	C	coding	233	702	1384	2085	90.0	0	True	NA	NA
PB.5441.5	chr18	-	2012	10	novel_in_catalog	NOL4	novel	3957	11	NA	NA	-69	-1	combination_of_known_junctions	FALSE	canonical	1	2009	junction_9	9955.329650214726	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	119	1621	90.0	2733	False	NA	NA
PB.4951.1	chr17	-	2700	8	full-splice_match	PGAP3	ENST00000300658.8	2737	8	36	1	-14	0	multi-exon	FALSE	canonical	1	126071	junction_6	37135.42346381329	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	58	1020	15.0	-15	False	AATAAA	-16
PB.4951.2	chr17	-	3406	7	novel_in_catalog	PGAP3	novel	2220	4	NA	NA	13	-1	intron_retention	FALSE	canonical	1	9664	junction_4	89025.36306534597	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	1428	1727	10.0	20	True	AATAAA	-15
PB.8318.8	chr3	+	2033	11	incomplete-splice_match	POGLUT1	ENST00000647766.1	2888	12	889	679	873	0	5prime_fragment	FALSE	canonical	1	3168	junction_4	63919.764159139384	NA	4	NA	TRUE	NA	NA	NA	C	coding	233	702	624	1325	90.0	-10005	False	NA	NA
PB.5441.1	chr18	-	5140	10	full-splice_match	NOL4	ENST00000590712.5	1930	10	-1728	-1482	19	-7	multi-exon	FALSE	canonical	1	12528	junction_9	7612.537574356376	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	1681	3405	50.0	-21	True	AATAAA	-15
PB.5441.3	chr18	-	3797	10	full-splice_match	NOL4	ENST00000590712.5	1930	10	-1729	-138	18	-1	multi-exon	FALSE	canonical	1	12528	junction_9	7612.537574356376	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	1682	3406	90.0	-22	True	NA	NA
PB.5441.2	chr18	-	3554	11	novel_not_in_catalog	NOL4	novel	3957	11	NA	NA	166	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	10511.670118967775	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	1437	3161	95.0	168	False	NA	NA
PB.4827.2	chr17	+	1872	10	full-splice_match	ALDH3A2	ENST00000176643.10	3928	10	202	1854	5	0	multi-exon	FALSE	canonical	1	516062	junction_1	111283.65284008293	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	245	1702	30.0	-198	False	AATAAA	-13
PB.4827.3	chr17	+	2766	10	full-splice_match	ALDH3A2	ENST00000176643.10	3928	10	220	942	-5	129	multi-exon	FALSE	canonical	1	516062	junction_1	111283.65284008293	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	227	1684	65.0	-32	True	NA	NA
PB.1765.26	chr11	-	1404	15	incomplete-splice_match	NAP1L4	ENST00000380542.8	2511	16	-1	4688	-1	-3528	3prime_fragment	FALSE	canonical	1	177742	junction_11	411020.9200290796	NA	4	NA	TRUE	NA	NA	NA	C	coding	375	1128	143	1270	25.0	5	True	AATAAA	-21
PB.1765.24	chr11	-	5194	14	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	177742	junction_10	393742.4893538217	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	148	1188	20.0	0	True	ATTAAA	-14
PB.1765.23	chr11	-	2350	15	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	8969	junction_8	463140.9622479744	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	55	1110	20.0	0	True	ATTAAA	-14
PB.2267.4	chr11	+	2295	15	incomplete-splice_match	DDX10	ENST00000526794.1	6707	17	-55	80806	-2	-39	3prime_fragment	FALSE	canonical	1	28579	junction_2	49356.89806885753	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2208	88	2295	70.0	-2	True	CATAAA	-37
PB.1765.20	chr11	-	2496	17	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	4264	junction_16	492255.63321287505	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	166	1326	20.0	0	True	ATTAAA	-15
PB.11284.52	chr8	-	2220	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	439036.90812905546	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	591	1664	20.0	-1	True	AATAAA	-10
PB.4827.1	chr17	+	2505	11	novel_in_catalog	ALDH3A2	novel	665	5	NA	NA	1	-34	combination_of_known_junctions	FALSE	canonical	1	3712	junction_1	217203.19526157988	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	129	1586	65.0	-751	False	NA	NA
PB.4827.6	chr17	+	3418	11	full-splice_match	ALDH3A2	ENST00000395575.6	3640	11	30	192	2	-186	multi-exon	FALSE	canonical	1	3531	junction_1	217250.6511333165	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	129	1586	25.0	-25	True	CATAAA	-27
PB.6607.10	chr2	+	6085	25	novel_in_catalog	KDM3A	novel	709	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	72822	junction_1	120329.42739083651	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	96	2519	25.0	9	True	ATTAAA	-11
PB.4827.7	chr17	+	3506	10	full-splice_match	ALDH3A2	ENST00000176643.10	3928	10	237	185	12	-179	multi-exon	FALSE	canonical	1	516062	junction_1	111283.65284008293	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	210	1667	35.0	-15	True	CATAAA	-34
PB.1722.3	chr10	-	3956	21	novel_in_catalog	ADAM8	novel	3279	23	NA	NA	-15	-3	intron_retention	FALSE	canonical	1	122726	junction_20	46141.24873841192	NA	13	1	TRUE	NA	NA	NA	C	coding	369	1110	67	1176	20.0	2153	False	AATAAA	-13
PB.1722.2	chr10	-	3190	22	novel_in_catalog	ADAM8	novel	3279	23	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	1	21233	junction_1	65621.6423174543	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	56	2452	25.0	-5	True	AATAAA	-18
PB.1722.1	chr10	-	3862	22	novel_in_catalog	ADAM8	novel	3279	23	NA	NA	-15	3	intron_retention	TRUE	canonical	1	122726	junction_21	49582.77383611618	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	67	2184	25.0	2153	False	AATAAA	-19
PB.1722.7	chr10	-	3049	21	novel_in_catalog	ADAM8	novel	3279	23	NA	NA	-1	-3	no_combination_of_known_junctions	FALSE	canonical	1	1004	junction_4	67275.52641776577	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	42	2237	20.0	9	True	AATAAA	-13
PB.1722.6	chr10	-	3270	23	novel_not_in_catalog	ADAM8	novel	3279	23	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	1872	junction_9	74736.95984188162	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	52	831	20.0	-1	True	AATAAA	-13
PB.1722.5	chr10	-	3262	23	full-splice_match	ADAM8	ENST00000445355.7	3279	23	-3	20	-3	-3	multi-exon	FALSE	canonical	1	122726	junction_22	50853.29354166871	NA	9	3	TRUE	NA	NA	NA	C	coding	824	2475	55	2529	20.0	-4	True	AATAAA	-13
PB.1722.4	chr10	-	3451	23	novel_in_catalog	ADAM8	novel	3279	23	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2589	junction_22	64849.7270392568	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	319	2718	20.0	-1	True	AATAAA	-13
PB.7381.34	chr20	+	3915	7	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-1	-861	intron_retention	FALSE	non_canonical	0	0	junction_1	305611.33254275034	NA	5	1	TRUE	NA	NA	NA	C	coding	224	675	893	1567	90.0	-5	True	NA	NA
PB.7381.35	chr20	+	3292	8	full-splice_match	STX16	ENST00000358029.8	4329	8	150	887	3	-861	multi-exon	FALSE	canonical	1	59797	junction_1	255480.67011052414	NA	5	NA	TRUE	NA	NA	NA	C	coding	272	819	126	944	90.0	-8712	False	NA	NA
PB.1722.9	chr10	-	3446	24	novel_in_catalog	ADAM8	novel	3279	23	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	1961	junction_22	77512.83496621094	NA	0	NA	TRUE	NA	NA	NA	C	coding	889	2670	46	2715	20.0	5	True	AATAAA	-11
PB.4827.5	chr17	+	3429	10	full-splice_match	ALDH3A2	ENST00000176643.10	3928	10	498	1	98	0	multi-exon	FALSE	canonical	1	516062	junction_1	111283.65284008293	NA	4	NA	TRUE	NA	NA	NA	C	coding	453	1362	45	1406	25.0	98	False	TATAAA	-21
PB.7381.30	chr20	+	2943	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	8	1231	intron_retention	FALSE	canonical	1	42049	junction_5	263488.495397016	NA	2	NA	TRUE	NA	NA	NA	C	coding	256	771	747	1517	35.0	-22	True	ATTAAA	-27
PB.7381.31	chr20	+	3200	7	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-8	-861	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	308797.7011965115	NA	4	1	TRUE	NA	NA	NA	C	coding	139	420	433	852	90.0	-19	True	NA	NA
PB.7381.32	chr20	+	2920	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	-5	1233	intron_retention	FALSE	canonical	1	226732	junction_3	246964.21715616123	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	741	1076	30.0	-16	True	ATTAAA	-29
PB.7381.33	chr20	+	3892	9	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-2	-861	intron_retention	FALSE	non_canonical	0	0	junction_1	264857.8793768462	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	630	1544	90.0	-6	True	NA	NA
PB.11307.25	chr8	-	2785	1	novel_in_catalog	RAD21	novel	3749	14	NA	NA	2718	-5709	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	3309	False	NA	NA
PB.11307.24	chr8	-	5939	1	novel_in_catalog	RAD21	novel	3749	14	NA	NA	103	-5708	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	105	318	409	726	80.0	12	True	NA	NA
PB.11307.21	chr8	-	1637	12	incomplete-splice_match	RAD21	ENST00000297338.6	3749	14	221	4733	-117	-3334	3prime_fragment	FALSE	canonical	1	430119	junction_11	484027.9118770762	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1569	68	1636	65.0	-3	True	NA	NA
PB.11307.20	chr8	-	1839	13	incomplete-splice_match	RAD21	ENST00000297338.6	3749	14	103	3061	103	-1662	3prime_fragment	FALSE	canonical	1	430119	junction_12	484551.4473812281	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1653	186	1838	65.0	12	True	NA	NA
PB.3496.9	chr14	+	3094	27	novel_in_catalog	MTHFD1	novel	6814	27	NA	NA	-15	3	combination_of_known_junctions	FALSE	canonical	1	4991	junction_2	253242.25202165905	NA	4	1	TRUE	NA	NA	NA	C	coding	915	2748	94	2841	25.0	-18	True	AATAAA	-20
PB.3496.8	chr14	+	3135	28	full-splice_match	MTHFD1	ENST00000216605.12	3136	28	3	-2	3	2	multi-exon	FALSE	canonical	1	58134	junction_10	248891.7935659097	NA	0	NA	TRUE	NA	NA	NA	C	coding	935	2808	76	2883	25.0	0	True	AATAAA	-19
PB.2669.4	chr12	+	3773	31	full-splice_match	ESYT1	ENST00000394048.9	4388	31	179	436	-32	-156	multi-exon	FALSE	canonical	1	478688	junction_1	182479.00767541883	NA	0	NA	TRUE	NA	NA	NA	C	coding	1104	3315	86	3400	25.0	-32	True	AATACA	-25
PB.2669.5	chr12	+	3801	31	full-splice_match	ESYT1	ENST00000267113.4	3577	31	-29	-195	-29	-155	multi-exon	FALSE	canonical	1	155770	junction_13	234766.34571505347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1114	3345	83	3427	25.0	-29	True	AATACA	-26
PB.2669.6	chr12	+	4083	30	novel_in_catalog	ESYT1	novel	540	6	NA	NA	-20	-3	combination_of_known_junctions	FALSE	canonical	1	30323	junction_24	292103.87700728123	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	74	3277	20.0	-20	True	ATTAAA	-11
PB.2669.7	chr12	+	4573	29	novel_in_catalog	ESYT1	novel	540	6	NA	NA	0	-3	intron_retention	FALSE	canonical	1	478688	junction_1	181312.40557529428	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	54	2408	20.0	0	True	ATTAAA	-11
PB.3496.3	chr14	+	4402	28	novel_not_in_catalog	MTHFD1	novel	6814	27	NA	NA	3	2	intron_retention	FALSE	canonical	1	5482	junction_13	279653.4670471666	NA	3	1	TRUE	NA	NA	NA	C	coding	437	1314	115	1428	25.0	-39	True	AATAAA	-19
PB.2669.1	chr12	+	3792	31	full-splice_match	ESYT1	ENST00000394048.9	4388	31	598	-2	387	2	multi-exon	FALSE	canonical	1	478688	junction_1	182479.00767541883	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	30	2981	10.0	-9583	False	ATTAAA	-16
PB.2669.2	chr12	+	4082	30	novel_in_catalog	ESYT1	novel	540	6	NA	NA	-44	2	combination_of_known_junctions	FALSE	canonical	1	30323	junction_24	252927.07280497052	NA	1	NA	TRUE	NA	NA	NA	C	coding	1057	3174	98	3271	10.0	-44	True	ATTAAA	-16
PB.2669.3	chr12	+	4247	31	full-splice_match	ESYT1	ENST00000267113.4	3577	31	-36	-634	-36	4	multi-exon	FALSE	canonical	1	155770	junction_13	234766.34571505347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1114	3345	90	3434	10.0	-36	True	ATTAAA	-18
PB.6872.4	chr2	-	906	4	full-splice_match	FKBP7	ENST00000424785.6	2834	4	-10	1938	7	-3	multi-exon	FALSE	canonical	1	116778	junction_2	25822.131984447416	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	70	738	30.0	-1	True	AATAAA	-22
PB.6872.2	chr2	-	2976	5	novel_in_catalog	FKBP7	novel	2834	4	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	5345	junction_2	79473.12991626478	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	93	476	40.0	-24	True	AATAAA	-21
PB.8179.6	chr3	+	2815	17	novel_in_catalog	PRKCD	novel	589	4	NA	NA	12	-80	intron_retention	FALSE	canonical	1	52789	junction_1	183699.25608738483	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	837	2444	80.0	-6	True	NA	NA
PB.680.2	chr1	-	1575	3	incomplete-splice_match	PEX11B	ENST00000369306.7	1740	4	115	4300	115	-4299	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	35	463	95.0	-6	True	NA	NA
PB.6872.1	chr2	-	2680	3	full-splice_match	FKBP7	ENST00000419184.1	638	3	38	-2080	1	-1	multi-exon	FALSE	canonical	1	26530	junction_2	76747.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	237	575	35.0	10	True	AATAAA	-22
PB.3904.7	chr15	-	2492	11	novel_in_catalog	BNIP2	novel	6325	10	NA	NA	-7	0	no_combination_of_known_junctions	FALSE	canonical	1	2337	junction_2	260817.3514331629	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	251	1234	55.0	-8	True	AATAAA	-17
PB.3904.6	chr15	-	2584	10	full-splice_match	BNIP2	ENST00000612191.4	2515	10	-69	0	22	0	multi-exon	FALSE	canonical	1	381282	junction_4	133615.53503500766	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	73	1380	55.0	-193	False	AATAAA	-17
PB.3904.5	chr15	-	6222	11	novel_in_catalog	BNIP2	novel	6325	10	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	2337	junction_2	260817.3514331629	NA	3	NA	TRUE	NA	NA	NA	C	coding	327	984	263	1246	10.0	-20	True	AATAAA	-14
PB.6799.6	chr2	+	3129	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	11	254	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	174130.8624659506	NA	2	NA	TRUE	NA	NA	NA	C	coding	704	2115	143	2257	30.0	28	True	GATAAA	-6
PB.3904.3	chr15	-	6156	11	novel_in_catalog	BNIP2	novel	6325	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	88124	junction_1	226761.0649626827	NA	3	NA	TRUE	NA	NA	NA	C	coding	326	981	253	1233	10.0	-10	True	AATAAA	-15
PB.3904.2	chr15	-	6131	10	full-splice_match	BNIP2	ENST00000415213.6	1509	10	-11	-4611	-11	0	multi-exon	TRUE	canonical	1	3957	junction_9	218996.84523050458	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	78	1208	10.0	382	False	AATAAA	-15
PB.3904.1	chr15	-	6117	10	full-splice_match	BNIP2	ENST00000267859.7	6325	10	208	0	-6	0	multi-exon	FALSE	canonical	1	381282	junction_4	133615.53503500766	NA	2	NA	TRUE	NA	NA	NA	C	coding	314	945	250	1194	10.0	-7	True	AATAAA	-15
PB.10491.6	chr7	+	1987	11	novel_in_catalog	STARD3NL	novel	1728	9	NA	NA	-9	-1	no_combination_of_known_junctions	FALSE	canonical	1	1761	junction_2	302615.8282824776	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	519	1223	10.0	-30	True	ATTAAA	-14
PB.3904.8	chr15	-	2435	11	novel_in_catalog	BNIP2	novel	6325	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	88124	junction_1	226761.0649626827	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	251	1231	55.0	-8	True	AATAAA	-17
PB.9001.1	chr4	+	3657	1	novel_in_catalog	IL15	novel	1447	8	NA	NA	47	-80462	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	88	267	156	422	85.0	12	True	NA	NA
PB.10544.1	chr7	-	4757	15	novel_not_in_catalog	GRB10	novel	4785	16	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	82340.33145058902	NA	1	1	TRUE	NA	NA	NA	B	coding	536	1611	258	1868	15.0	3	True	AATAAA	-26
PB.10544.3	chr7	-	2672	18	novel_not_in_catalog	GRB10	novel	4785	16	NA	NA	-56	6	any annotated donor/acceptor	FALSE	canonical	1	424	junction_17	107247.81016468871	NA	0	NA	TRUE	NA	NA	NA	B	coding	536	1611	684	2294	15.0	712	False	ATTAAA	-20
PB.536.5	chr1	-	1854	1	novel_in_catalog	GLMN	novel	1833	18	NA	NA	0	387	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.9262.4	chr5	+	3772	16	full-splice_match	PIK3R1	ENST00000521381.5	7011	16	36	3203	-20	13	multi-exon	FALSE	canonical	1	143890	junction_1	144150.21405180855	NA	2	NA	TRUE	NA	NA	NA	C	coding	724	2175	581	2755	20.0	-6	True	ATTAAA	-20
PB.3180.3	chr13	-	2859	9	novel_not_in_catalog	MRPS31P5	novel	3494	9	NA	NA	12	-4	any annotated donor/acceptor	FALSE	canonical	1	5309	junction_8	23191.684500794137	NA	1	NA	TRUE	NA	NA	NA	B	coding	137	414	1	414	15.0	13	False	AATAAA	-14
PB.3180.2	chr13	-	2721	9	novel_in_catalog	MRPS31P5	novel	3494	9	NA	NA	12	-3	no_combination_of_known_junctions	FALSE	canonical	1	20946	junction_8	20049.18845614455	NA	0	NA	TRUE	NA	NA	NA	B	coding	105	318	1	318	20.0	13	False	AATAAA	-15
PB.3180.1	chr13	-	2765	9	novel_in_catalog	MRPS31P5	novel	3494	9	NA	NA	11	-3	no_combination_of_known_junctions	FALSE	canonical	1	20946	junction_8	19244.859383417173	NA	0	NA	TRUE	NA	NA	NA	B	coding	105	318	2	319	20.0	12	False	AATAAA	-15
PB.9262.5	chr5	+	5261	16	full-splice_match	PIK3R1	ENST00000521381.5	7011	16	36	1714	-20	1351	multi-exon	FALSE	canonical	1	143890	junction_1	144150.21405180855	NA	3	NA	TRUE	NA	NA	NA	C	coding	724	2175	581	2755	25.0	-6	True	ATTAAA	-15
PB.6989.5	chr2	+	3554	14	incomplete-splice_match	ATIC	ENST00000236959.13	2213	16	289	808	15	-343	3prime_fragment	FALSE	canonical	1	815763	junction_7	208271.67812401117	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	38	1576	85.0	25	True	NA	NA
PB.6989.4	chr2	+	1940	16	full-splice_match	ATIC	ENST00000236959.13	2213	16	277	-4	3	4	multi-exon	FALSE	canonical	1	815763	junction_7	260877.3179669453	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	50	1828	15.0	13	True	AATAAA	-26
PB.493.7	chr1	+	5690	6	incomplete-splice_match	IFI44	ENST00000370747.8	1687	9	0	2	0	-2	intron_retention	FALSE	canonical	1	315311	junction_1	113348.10922710621	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	86	1150	25.0	0	True	AATAAA	-22
PB.3180.4	chr13	-	2625	8	novel_in_catalog	MRPS31P5	novel	3494	9	NA	NA	-2	-17	no_combination_of_known_junctions	FALSE	canonical	1	14411	junction_5	25473.327072105225	NA	0	NA	TRUE	NA	NA	NA	B	coding	109	330	3	332	50.0	-1	True	AATAAA	-1
PB.6199.10	chr19	+	6666	7	novel_not_in_catalog	TPM3P9	novel	2920	2	NA	NA	12	13590	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	74234.37227831563	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	2914	5154	20.0	12	True	NA	NA
PB.6376.3	chr2	-	1818	13	novel_in_catalog	EIF2B4	novel	1754	14	NA	NA	-3	3	intron_retention	FALSE	canonical	1	15181	junction_12	170384.23755072843	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	247	1773	10.0	0	True	AATAAA	-22
PB.9162.2	chr5	-	4646	35	full-splice_match	DROSHA	ENST00000513349.5	4681	35	16	19	16	-6	multi-exon	FALSE	canonical	1	114725	junction_29	94976.13933051233	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	381	4367	30.0	-20	True	AATAAA	-14
PB.11241.11	chr8	-	4598	13	full-splice_match	VIRMA	ENST00000421249.2	3924	13	62	-736	56	-240	multi-exon	FALSE	canonical	1	184214	junction_10	40838.77293972264	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	21	3464	45.0	-1	True	AATAAA	-9
PB.9262.8	chr5	+	2510	10	full-splice_match	PIK3R1	ENST00000320694.12	2625	10	263	-148	-64	-22	multi-exon	FALSE	canonical	1	25520	junction_1	179719.35863664057	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	106	1380	80.0	-5988	False	NA	NA
PB.9262.9	chr5	+	2480	10	full-splice_match	PIK3R1	ENST00000320694.12	2625	10	174	-29	-153	7	multi-exon	FALSE	canonical	1	25520	junction_1	179719.35863664057	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	195	1469	20.0	-2	True	ATTAAA	-14
PB.3402.6	chr14	-	2031	3	incomplete-splice_match	KLHL28	ENST00000396128.8	6545	5	10	9218	10	-4724	3prime_fragment	FALSE	canonical	1	96720	junction_1	8322.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	451	1356	111	1466	40.0	-9	True	AATAAA	-23
PB.10010.2	chr6	+	3613	4	full-splice_match	C6orf223	ENST00000336600.5	3581	4	-30	-2	-10	2	multi-exon	FALSE	canonical	1	38521	junction_1	15505.990247499692	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	51	779	10.0	-15	True	NA	NA
PB.7333.3	chr20	+	3285	5	full-splice_match	SLC2A10	ENST00000359271.3	4389	5	163	941	-49	-941	multi-exon	FALSE	canonical	1	53069	junction_1	24847.73229592592	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	88	1713	65.0	1	True	NA	NA
PB.7333.2	chr20	+	4064	5	full-splice_match	SLC2A10	ENST00000359271.3	4389	5	144	181	-68	-181	multi-exon	FALSE	canonical	1	53069	junction_1	24847.73229592592	NA	5	NA	TRUE	NA	NA	NA	C	coding	541	1626	107	1732	45.0	-18	True	NA	NA
PB.7333.1	chr20	+	4281	5	full-splice_match	SLC2A10	ENST00000359271.3	4389	5	81	27	81	-27	multi-exon	FALSE	canonical	1	53069	junction_1	24847.73229592592	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	170	1795	40.0	-104	False	NA	NA
PB.6585.4	chr2	-	2743	8	novel_in_catalog	SUCLG1	novel	1475	9	NA	NA	-19	-187	intron_retention	FALSE	canonical	1	778432	junction_7	342889.5631852736	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	51	758	70.0	-1	True	NA	NA
PB.4517.10	chr16	-	1678	4	full-splice_match	COG8	ENST00000562081.2	1731	4	9	44	9	-44	multi-exon	FALSE	canonical	1	185716	junction_3	54964.57944895058	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	23	1627	30.0	-11	True	NA	NA
PB.4517.11	chr16	-	2919	3	incomplete-splice_match	COG8	ENST00000562081.2	1731	4	9	441	9	-441	3prime_fragment	FALSE	canonical	1	185716	junction_2	65770.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	23	1483	35.0	-11	True	AATAAA	-28
PB.4517.12	chr16	-	2770	3	incomplete-splice_match	COG8	ENST00000562081.2	1731	4	9	590	9	-590	3prime_fragment	FALSE	canonical	1	185716	junction_2	65770.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	23	1483	95.0	-11	True	NA	NA
PB.949.4	chr1	+	2445	6	full-splice_match	CACYBP	ENST00000367679.6	2766	6	326	-5	104	0	multi-exon	FALSE	canonical	1	783	junction_2	169895.48244894564	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	123	809	75.0	8	True	NA	NA
PB.10010.3	chr6	+	5264	4	full-splice_match	C6orf223	ENST00000336600.5	3581	4	-27	-1656	-7	1656	multi-exon	FALSE	canonical	1	38521	junction_1	15505.990247499692	NA	3	NA	TRUE	NA	NA	NA	C	coding	242	729	48	776	20.0	-12	True	ATTAAA	-20
PB.1267.2	chr10	-	2014	5	full-splice_match	IDI1	ENST00000381344.7	2301	5	285	2	-2	-2	multi-exon	FALSE	canonical	1	305653	junction_4	373868.5750690843	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	51	737	20.0	0	True	AGTAAA	-15
PB.2755.2	chr12	+	6852	9	novel_not_in_catalog	FRS2	novel	611	7	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	82738.99740751032	NA	19	2	TRUE	NA	NA	NA	C	coding	508	1527	492	2018	35.0	-8597	False	AATAAA	-34
PB.1846.25	chr11	-	4247	22	full-splice_match	HPS5	ENST00000396253.7	4725	22	47	431	-39	-40	multi-exon	FALSE	canonical	1	34157	junction_21	37269.88608159605	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	417	3464	70.0	5	True	NA	NA
PB.1846.24	chr11	-	4366	22	novel_in_catalog	HPS5	novel	4725	22	NA	NA	18	4	no_combination_of_known_junctions	FALSE	canonical	1	3366	junction_20	49950.40587434038	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	261	3539	35.0	-24	True	TATAAA	-12
PB.1846.27	chr11	-	4355	23	full-splice_match	HPS5	ENST00000349215.7	4491	23	-21	157	3	-157	multi-exon	FALSE	canonical	1	36087	junction_22	40806.80729340884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	300	3689	75.0	-1	True	NA	NA
PB.1846.26	chr11	-	4473	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	-302	-157	combination_of_known_junctions	FALSE	canonical	1	10828	junction_22	44386.350457382956	NA	3	NA	TRUE	NA	NA	NA	C	coding	1129	3390	418	3807	75.0	-49	False	NA	NA
PB.1846.21	chr11	-	4683	22	novel_not_in_catalog	HPS5	novel	4725	22	NA	NA	-308	-185	any annotated donor/acceptor	FALSE	canonical	1	145	junction_17	52598.980877757356	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	997	3654	40.0	-55	False	AATAAA	-26
PB.1846.20	chr11	-	4781	24	novel_not_in_catalog	HPS5	novel	4725	22	NA	NA	-42	-185	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	57251.09527739402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1104	3315	438	3752	40.0	2	True	AATAAA	-26
PB.1846.23	chr11	-	4380	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	8	4	no_combination_of_known_junctions	FALSE	canonical	1	10737	junction_22	44399.851834989364	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	164	3553	35.0	4	True	TATAAA	-12
PB.1846.22	chr11	-	4514	23	full-splice_match	HPS5	ENST00000349215.7	4491	23	-19	-4	5	4	multi-exon	FALSE	canonical	1	36087	junction_22	40806.80729340884	NA	3	NA	TRUE	NA	NA	NA	C	coding	1129	3390	298	3687	35.0	1	True	TATAAA	-12
PB.2755.4	chr12	+	5355	9	full-splice_match	FRS2	ENST00000549921.5	1952	9	4	-3407	1	-1411	multi-exon	FALSE	canonical	1	67827	junction_1	55784.18801002216	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	413	1939	55.0	-41	True	AATAAA	-16
PB.1846.29	chr11	-	4208	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	-1	-157	no_combination_of_known_junctions	FALSE	canonical	1	10737	junction_22	44399.851834989364	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	153	3542	75.0	15	True	NA	NA
PB.1846.28	chr11	-	4316	22	full-splice_match	HPS5	ENST00000438420.6	4147	22	-326	157	-302	-157	multi-exon	FALSE	canonical	1	17314	junction_21	40064.99379316386	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	603	3650	75.0	-49	False	NA	NA
PB.2755.5	chr12	+	5432	10	novel_in_catalog	FRS2	novel	611	7	NA	NA	-2	-1400	combination_of_known_junctions	FALSE	canonical	1	14931	junction_4	75162.16264998115	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	479	2005	35.0	-39	True	AATAAA	-27
PB.2755.6	chr12	+	5468	10	novel_in_catalog	FRS2	novel	611	7	NA	NA	-1	-1409	combination_of_known_junctions	FALSE	canonical	1	2655	junction_2	77831.94548623874	NA	2	1	TRUE	NA	NA	NA	C	coding	508	1527	524	2050	55.0	-38	True	AATAAA	-18
PB.2483.8	chr12	+	2947	9	incomplete-splice_match	ATF7IP	ENST00000537653.5	3563	11	0	15307	0	104	3prime_fragment	FALSE	canonical	1	149245	junction_1	85622.35938765864	NA	1	NA	TRUE	NA	NA	NA	C	coding	929	2787	159	2945	40.0	-5	True	NA	NA
PB.2483.9	chr12	+	8080	16	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	108114.35812426683	NA	5	NA	TRUE	NA	NA	NA	C	coding	1270	3813	159	3971	30.0	-5	True	AATAAA	-15
PB.2483.6	chr12	+	4169	15	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	-3	2	any annotated donor/acceptor	FALSE	canonical	1	2766	junction_14	111300.637216028	NA	1	NA	TRUE	NA	NA	NA	C	coding	1276	3831	163	3993	20.0	-9	True	AATAAA	-19
PB.2483.7	chr12	+	6784	1	novel_in_catalog	ATF7IP	novel	8878	15	NA	NA	0	-51552	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-5	True	NA	NA
PB.2483.4	chr12	+	3076	2	incomplete-splice_match	ATF7IP	ENST00000545723.1	577	4	-18	11421	-6	1365	3prime_fragment	FALSE	canonical	1	149245	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	520	1563	166	1728	100.0	-12	True	NA	NA
PB.2483.5	chr12	+	3104	11	full-splice_match	ATF7IP	ENST00000537653.5	3563	11	-5	464	-4	-186	multi-exon	FALSE	canonical	1	149245	junction_1	78678.75672689549	NA	2	NA	TRUE	NA	NA	NA	C	coding	980	2940	164	3103	35.0	-10	True	NA	NA
PB.2483.2	chr12	+	4465	15	full-splice_match	ATF7IP	ENST00000261168.8	8878	15	7	4406	7	-234	multi-exon	TRUE	canonical	1	149245	junction_1	73140.79065593638	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	197	4009	80.0	2	True	NA	NA
PB.2483.3	chr12	+	3816	13	incomplete-splice_match	ATF7IP	ENST00000261168.8	8878	15	33	21384	-11	-355	3prime_fragment	FALSE	canonical	1	149245	junction_1	76897.32890404185	NA	1	NA	TRUE	NA	NA	NA	C	coding	1106	3321	171	3491	60.0	-17	True	NA	NA
PB.2483.1	chr12	+	4134	15	full-splice_match	ATF7IP	ENST00000261168.8	8878	15	58	4686	2	2	multi-exon	FALSE	canonical	1	149245	junction_1	73140.79065593638	NA	4	NA	TRUE	NA	NA	NA	C	coding	1270	3813	146	3958	20.0	8	True	AATAAA	-19
PB.1945.38	chr11	-	2503	12	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3084	-17802	any annotated donor/acceptor	FALSE	canonical	1	373	junction_9	316319.6814870197	NA	1	NA	TRUE	NA	NA	NA	B	coding	284	855	814	1668	20.0	5764	False	AATAAA	-17
PB.921.8	chr1	-	2602	6	full-splice_match	SLC19A2	ENST00000646527.1	3590	6	-16	1004	-16	-887	multi-exon	FALSE	canonical	1	99013	junction_4	37769.91907854715	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	195	1688	30.0	-17	True	AATAAA	-17
PB.11290.9	chr8	-	2465	8	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	13	-522	any annotated donor/acceptor	FALSE	canonical	1	18406	junction_7	149420.4973515197	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	660	1211	50.0	15	True	AATAAA	-24
PB.9980.2	chr6	-	3747	5	full-splice_match	TREML2	ENST00000483722.1	3302	5	82	-527	82	527	multi-exon	FALSE	canonical	1	20048	junction_4	14793.0337828317	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	105	1070	10.0	-10	True	NA	NA
PB.2673.1	chr12	+	1396	7	full-splice_match	NABP2	ENST00000267023.8	1417	7	19	2	-13	-2	multi-exon	FALSE	canonical	1	186407	junction_1	246461.6158124605	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	122	757	10.0	0	True	AATAAA	-12
PB.2673.2	chr12	+	1716	6	full-splice_match	NABP2	ENST00000380198.6	1775	6	57	2	15	-2	multi-exon	FALSE	canonical	1	344677	junction_5	191043.31488267262	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	442	1077	10.0	72	True	AATAAA	-12
PB.1945.30	chr11	-	2378	13	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3027	-17801	any annotated donor/acceptor	FALSE	canonical	1	21	junction_12	236135.51135076841	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	67	1542	20.0	34	True	AATAAA	-18
PB.11290.2	chr8	-	2999	8	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	18406	junction_7	149420.4973515197	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	676	1227	35.0	-1	True	NA	NA
PB.11290.1	chr8	-	2905	7	full-splice_match	SLC25A32	ENST00000297578.8	2891	7	-16	2	-16	-2	multi-exon	FALSE	canonical	1	266335	junction_5	58812.23729708715	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	184	1131	40.0	-14	True	NA	NA
PB.1945.33	chr11	-	3006	15	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3043	-17802	any annotated donor/acceptor	FALSE	canonical	1	1275	junction_8	328032.5262617385	NA	0	NA	TRUE	NA	NA	NA	B	coding	219	660	287	946	20.0	18	True	AATAAA	-17
PB.1945.34	chr11	-	2724	14	full-splice_match	SLC43A3	ENST00000395123.6	2619	14	-108	3	-10	-1	multi-exon	FALSE	canonical	1	30774	junction_13	228257.86765195575	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	414	1889	20.0	5854	False	AATAAA	-17
PB.1945.35	chr11	-	2792	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3000	-17802	no_combination_of_known_junctions	FALSE	canonical	1	1498	junction_13	288153.46392916865	NA	3	NA	TRUE	NA	NA	NA	B	coding	491	1476	482	1957	20.0	-1	True	AATAAA	-17
PB.1945.36	chr11	-	2753	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3101	-17802	no_combination_of_known_junctions	FALSE	canonical	1	11645	junction_13	232372.02707793313	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	443	1918	20.0	5747	False	AATAAA	-17
PB.1945.37	chr11	-	2518	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3026	-17802	no_combination_of_known_junctions	FALSE	canonical	1	4683	junction_12	296440.1750085106	NA	0	NA	TRUE	NA	NA	NA	B	coding	504	1515	169	1683	20.0	35	True	AATAAA	-17
PB.10491.1	chr7	+	1359	9	full-splice_match	STARD3NL	ENST00000009041.11	1728	9	110	259	8	31	multi-exon	FALSE	canonical	1	388141	junction_1	108471.89853360351	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	148	852	10.0	-40	True	AATAAA	-17
PB.11185.1	chr8	-	3108	16	novel_in_catalog	STAU2	novel	2646	12	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	14708	junction_13	92701.52434623476	NA	3	NA	TRUE	NA	NA	NA	C	coding	608	1827	281	2107	10.0	0	True	AGTAAA	-22
PB.8316.1	chr3	-	1973	2	novel_not_in_catalog	ARHGAP31-AS1	novel	624	2	NA	NA	-187	969	any annotated donor/acceptor	FALSE	canonical	1	4971	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	182	False	AATAAA	-10
PB.11185.6	chr8	-	2800	14	novel_in_catalog	STAU2	novel	2646	12	NA	NA	1	537	combination_of_known_junctions	FALSE	canonical	1	14708	junction_11	93142.3969052463	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	298	1947	40.0	587	False	AATAAA	-20
PB.4573.2	chr16	+	4173	32	novel_in_catalog	PLCG2	novel	912	6	NA	NA	29	273	intron_retention	FALSE	canonical	1	859	junction_14	122556.78670442212	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	186	3878	25.0	-4	True	AATAAA	-17
PB.600.4	chr1	+	3136	9	full-splice_match	CSF1	ENST00000420111.6	1083	9	-95	-1958	-57	0	multi-exon	FALSE	canonical	1	25809	junction_5	73129.15575883535	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	212	982	25.0	-9	True	AATAAA	-18
PB.600.5	chr1	+	3876	8	novel_in_catalog	CSF1	novel	577	5	NA	NA	-24	2	intron_retention	FALSE	canonical	1	3915	junction_1	80735.0651676993	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	179	1720	20.0	-3	True	AATAAA	-20
PB.4573.3	chr16	+	8662	33	full-splice_match	PLCG2	ENST00000564138.5	8707	33	35	10	35	-10	multi-exon	FALSE	canonical	1	99459	junction_1	108207.94313416713	NA	1	NA	TRUE	NA	NA	NA	C	coding	1265	3798	180	3977	40.0	2	True	AATAAA	-16
PB.600.1	chr1	+	4156	10	novel_in_catalog	CSF1	novel	577	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2117	junction_1	79013.45111505451	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	339	2003	25.0	0	True	AATAAA	-17
PB.600.2	chr1	+	3995	9	full-splice_match	CSF1	ENST00000329608.10	4210	9	216	-1	-21	1	multi-exon	FALSE	canonical	1	80548	junction_1	53414.88202373356	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	176	1840	25.0	0	True	AATAAA	-19
PB.600.3	chr1	+	4045	9	novel_not_in_catalog	CSF1	novel	577	5	NA	NA	-57	0	intron_retention	FALSE	canonical	1	10	junction_3	83389.94634097087	NA	3	1	TRUE	NA	NA	NA	C	coding	559	1680	212	1891	25.0	-9	True	AATAAA	-18
PB.4573.4	chr16	+	5651	32	novel_in_catalog	PLCG2	novel	912	6	NA	NA	35	273	intron_retention	FALSE	canonical	1	99459	junction_1	108198.211391167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	180	3335	25.0	2	True	AATAAA	-17
PB.11185.5	chr8	-	2979	13	novel_in_catalog	STAU2	novel	2646	12	NA	NA	0	890	combination_of_known_junctions	FALSE	canonical	1	57923	junction_2	81458.04985526123	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	220	1773	35.0	-1	True	AATAAA	-15
PB.4573.5	chr16	+	4499	34	novel_not_in_catalog	PLCG2	novel	912	6	NA	NA	36	273	intron_retention	TRUE	canonical	1	4863	junction_26	127322.41509013908	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	179	3124	25.0	3	True	AATAAA	-17
PB.3965.12	chr15	-	3885	4	incomplete-splice_match	ADPGK	ENST00000563907.5	1041	5	-126	4793	-18	-962	3prime_fragment	FALSE	canonical	1	236688	junction_3	67022.96936291485	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	59	721	95.0	-10	True	NA	NA
PB.3965.13	chr15	-	3566	2	full-splice_match	ADPGK	ENST00000569058.1	575	2	9	-3000	-4	-962	multi-exon	FALSE	canonical	1	6833	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	2602	2943	95.0	20	True	NA	NA
PB.3965.10	chr15	-	2233	5	novel_not_in_catalog	ADPGK	novel	1820	4	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	116075.74406691304	NA	5	1	TRUE	NA	NA	NA	C	coding	258	777	488	1264	25.0	-8	True	ATTAAA	-16
PB.3965.11	chr15	-	4104	4	incomplete-splice_match	ADPGK	ENST00000567941.5	2716	7	-20	5850	-20	-958	3prime_fragment	FALSE	canonical	1	46682	junction_3	155696.99869796963	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	3136	3477	90.0	-12	True	NA	NA
PB.8334.28	chr3	-	2956	12	full-splice_match	GOLGB1	ENST00000494517.5	4959	12	-75	2078	-1	-529	multi-exon	FALSE	canonical	1	48981	junction_6	56187.94446298251	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2844	113	2956	60.0	-1	True	NA	NA
PB.8334.29	chr3	-	2793	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	-19	34657	-4	-833	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2661	131	2791	50.0	0	True	NA	NA
PB.1102.12	chr1	+	4373	12	novel_in_catalog	RCOR3	novel	564	6	NA	NA	-118	-366	combination_of_known_junctions	FALSE	canonical	1	10115	junction_2	90790.29041598106	NA	4	1	TRUE	NA	NA	NA	C	coding	432	1299	824	2122	20.0	2	True	ATTAAA	-15
PB.8334.24	chr3	-	3168	13	incomplete-splice_match	GOLGB1	ENST00000340645.9	11187	22	15	34252	0	-424	3prime_fragment	FALSE	canonical	1	27753	junction_7	63689.75077649638	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3057	112	3168	60.0	0	True	NA	NA
PB.8334.25	chr3	-	3079	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	0	34352	0	-528	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2967	112	3078	60.0	0	True	NA	NA
PB.8334.26	chr3	-	6715	11	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	0	-529	intron_retention	FALSE	canonical	1	153688	junction_2	31953.94655688089	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2220	4496	6715	60.0	0	True	NA	NA
PB.8334.27	chr3	-	3063	13	incomplete-splice_match	GOLGB1	ENST00000340645.9	11187	22	15	34357	0	-529	3prime_fragment	FALSE	canonical	1	27753	junction_7	63689.75077649638	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2952	112	3063	60.0	0	True	NA	NA
PB.9572.1	chr5	+	2100	2	antisense	novelGene_CCDC69_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1102.11	chr1	+	2417	11	full-splice_match	RCOR3	ENST00000367006.8	2525	11	104	4	-5	0	multi-exon	FALSE	canonical	1	68064	junction_10	65927.91245147992	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	191	1489	25.0	14	True	AATATA	-19
PB.8334.22	chr3	-	4382	12	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	-1	-370	intron_retention	FALSE	canonical	1	69359	junction_6	51363.98084614973	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2379	2004	4382	70.0	-1	True	AAGAAA	-37
PB.8334.23	chr3	-	3245	13	novel_not_in_catalog	GOLGB1	novel	11187	22	NA	NA	0	-372	any annotated donor/acceptor	FALSE	canonical	1	29168	junction_7	73844.31168282173	NA	0	NA	TRUE	NA	NA	NA	C	coding	996	2988	257	3244	60.0	0	True	AAGAAA	-35
PB.1102.10	chr1	+	4307	12	full-splice_match	RCOR3	ENST00000419091.6	2041	12	-50	-2216	-5	-150	multi-exon	FALSE	canonical	1	137611	junction_10	50599.21168464424	NA	6	NA	TRUE	NA	NA	NA	C	coding	549	1650	191	1840	55.0	14	True	AATAAA	-23
PB.1355.1	chr10	-	2080	3	intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	612	junction_2	545.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	NA	False	NA	NA
PB.3002.4	chr12	-	3017	7	novel_in_catalog	EIF2B1	novel	2477	9	NA	NA	-12	-628	intron_retention	FALSE	canonical	1	297794	junction_6	179737.95560149656	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	113	781	25.0	-23	True	AATAAA	-29
PB.9198.1	chr5	+	4042	3	full-splice_match	CARD6	ENST00000254691.9	4221	3	176	3	52	-3	multi-exon	FALSE	canonical	1	31251	junction_2	1430.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	1037	3114	24	3137	35.0	-12	True	NA	NA
PB.9081.1	chr4	+	2396	3	full-splice_match	CDKN2AIP	ENST00000302350.4	2646	3	-21	271	-21	-2	multi-exon	FALSE	canonical	1	136788	junction_2	22008.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	919	1896	30.0	-162	False	AATAAA	-23
PB.5769.1	chr19	-	1305	8	full-splice_match	STX10	ENST00000587230.5	1136	8	-142	-27	3	0	multi-exon	FALSE	canonical	1	333164	junction_7	236213.04632497006	NA	1	NA	TRUE	NA	NA	NA	A	coding	249	750	208	957	5.0	-10	True	AATAAA	-19
PB.4318.9	chr16	+	3025	3	full-splice_match	RBBP6	ENST00000452655.6	854	3	-916	-1255	-4	1255	multi-exon	FALSE	canonical	1	274174	junction_1	58382.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	1048	1404	10.0	-4	True	AATAAA	-15
PB.4838.3	chr17	+	2651	9	full-splice_match	WSB1	ENST00000262394.6	5139	9	0	2488	0	-193	multi-exon	FALSE	canonical	1	414511	junction_5	392362.5030470666	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	317	1582	85.0	-34	False	NA	NA
PB.4318.7	chr16	+	4353	17	incomplete-splice_match	RBBP6	ENST00000319715.9	6840	18	-12	2875	-12	-125	3prime_fragment	FALSE	canonical	1	116270	junction_16	69952.68845416052	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3297	1056	4352	65.0	-12	True	NA	NA
PB.4318.6	chr16	+	4493	17	incomplete-splice_match	RBBP6	ENST00000319715.9	6840	18	-17	2740	11	10	3prime_fragment	FALSE	canonical	1	116270	junction_16	69952.68845416052	NA	1	NA	TRUE	NA	NA	NA	C	coding	1144	3432	1061	4492	80.0	-17	True	AAAACA	-22
PB.4318.5	chr16	+	2019	8	incomplete-splice_match	RBBP6	ENST00000567686.5	1138	10	1854	1877	10	-17	internal_fragment	FALSE	canonical	1	199849	junction_4	57695.9812334429	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	1062	1922	35.0	-18	True	AATAAA	-19
PB.4318.4	chr16	+	4791	17	incomplete-splice_match	RBBP6	ENST00000319715.9	6840	18	-22	2447	6	303	3prime_fragment	FALSE	canonical	1	116270	junction_16	69952.68845416052	NA	2	NA	TRUE	NA	NA	NA	C	coding	1242	3726	1066	4791	65.0	-22	True	NA	NA
PB.4318.3	chr16	+	4056	16	incomplete-splice_match	RBBP6	ENST00000348022.6	5739	17	-1027	3086	0	-336	3prime_fragment	FALSE	canonical	1	68053	junction_15	75409.99973431168	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2985	1072	4056	70.0	13	True	GATAAA	-34
PB.4318.2	chr16	+	4279	16	incomplete-splice_match	RBBP6	ENST00000348022.6	5739	17	-1038	2874	-11	-124	3prime_fragment	FALSE	canonical	1	68053	junction_15	75409.99973431168	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3195	1083	4277	60.0	2	True	NA	NA
PB.4318.1	chr16	+	3907	17	incomplete-splice_match	RBBP6	ENST00000319715.9	6840	18	-54	3363	-26	-613	3prime_fragment	FALSE	canonical	1	116270	junction_16	69952.68845416052	NA	0	NA	TRUE	NA	NA	NA	C	coding	936	2808	1098	3905	60.0	0	True	NA	NA
PB.222.6	chr1	-	1482	9	full-splice_match	DNAJC8	ENST00000263697.5	1759	9	-4	281	-4	0	multi-exon	FALSE	canonical	1	161763	junction_6	350893.9754503622	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	32	793	25.0	-1	True	AATAAA	-12
PB.2148.4	chr11	+	4021	16	novel_in_catalog	ATG16L2	novel	2243	18	NA	NA	-7	0	intron_retention	FALSE	canonical	1	17733	junction_3	144618.21667681503	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	2516	3778	15.0	-33	True	NA	NA
PB.3454.12	chr14	-	2822	20	full-splice_match	DLGAP5	ENST00000395425.6	2954	20	-72	204	-8	-180	multi-exon	FALSE	canonical	1	93294	junction_2	112107.15772204394	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	156	2684	30.0	-6	False	AATAAA	-23
PB.6445.23	chr2	-	4098	15	full-splice_match	PREPL	ENST00000410081.5	3080	15	258	-1276	-2	620	multi-exon	FALSE	canonical	1	26317	junction_14	201018.68097899685	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	205	2388	30.0	-1	True	AATAAA	-22
PB.1119.1	chr1	+	1706	12	novel_not_in_catalog	SMYD2	novel	3809	11	NA	NA	-17	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	160465.15232533633	NA	1	1	TRUE	NA	NA	NA	A	coding	434	1305	51	1355	10.0	-21	True	ATTAAA	-17
PB.226.9	chr1	+	3310	13	novel_not_in_catalog	PHACTR4	novel	597	5	NA	NA	81	-16	any annotated donor/acceptor	FALSE	canonical	1	3966	junction_1	84655.9155506703	NA	4	NA	TRUE	NA	NA	NA	C	coding	686	2061	270	2330	100.0	-19	True	NA	NA
PB.2148.5	chr11	+	3252	17	novel_in_catalog	ATG16L2	novel	2243	18	NA	NA	-7	2	intron_retention	FALSE	canonical	1	61883	junction_3	137437.6366624491	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	1743	3005	5.0	-33	True	NA	NA
PB.6324.4	chr2	-	7279	52	full-splice_match	NBAS	ENST00000281513.9	7281	52	-4	6	-4	-1	multi-exon	FALSE	canonical	1	101448	junction_39	47157.752339731866	NA	1	NA	TRUE	NA	NA	NA	C	coding	2371	7116	31	7146	15.0	-1	True	AATAAA	-17
PB.4729.1	chr17	-	3302	20	incomplete-splice_match	NEURL4	ENST00000315614.11	5182	29	4893	6	-53	-1	5prime_fragment	FALSE	canonical	1	59928	junction_14	58201.113804203625	NA	0	NA	TRUE	NA	NA	NA	A	coding	906	2721	93	2813	5.0	4911	False	AATAAA	-12
PB.11428.1	chr9	-	2653	19	novel_not_in_catalog	PUM3	novel	340	4	NA	NA	146	26805	any annotated donor/acceptor	FALSE	canonical	1	3499	junction_1	119628.42419631903	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	62	2008	30.0	-1	True	NA	NA
PB.8367.3	chr3	-	2449	16	full-splice_match	TXNRD3	ENST00000524230.6	2950	16	60	441	6	-4	multi-exon	FALSE	canonical	1	39823	junction_15	14088.742307088862	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	652	2031	25.0	6	True	AATATA	-21
PB.3002.1	chr12	-	1742	9	full-splice_match	EIF2B1	ENST00000424014.6	2477	9	116	619	7	-619	multi-exon	FALSE	canonical	1	297794	junction_8	176610.69143599432	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	94	1011	25.0	-4	True	AATAAA	-38
PB.747.5	chr1	-	3595	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-4	-55	intron_retention	FALSE	canonical	1	62823	junction_10	127517.73644748404	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	254	2104	35.0	371	False	NA	NA
PB.2148.7	chr11	+	2620	18	novel_in_catalog	ATG16L2	novel	2243	18	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	17733	junction_3	143041.65557046345	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	831	2372	10.0	-29	True	NA	NA
PB.3002.2	chr12	-	2319	8	novel_in_catalog	EIF2B1	novel	2477	9	NA	NA	10	-620	intron_retention	FALSE	canonical	1	297794	junction_7	182242.6351538979	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	122	790	20.0	-32	True	AATAAA	-37
PB.5598.10	chr19	+	2505	14	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	2	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	283999.91465908376	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	148	1554	40.0	13	True	ATTAAA	-10
PB.3002.3	chr12	-	2493	8	novel_in_catalog	EIF2B1	novel	2477	9	NA	NA	0	-621	intron_retention	FALSE	canonical	1	297794	junction_7	176707.02658493747	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	132	905	20.0	-42	True	AATAAA	-36
PB.2847.7	chr12	+	3875	16	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	1	-5	intron_retention	FALSE	canonical	1	1962474	junction_3	1349413.4133306795	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	1039	2772	30.0	-27	True	AATAAA	-10
PB.1051.14	chr1	+	6002	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-23	-2	intron_retention	FALSE	canonical	1	7347	junction_1	193968.0440101579	NA	3	NA	TRUE	NA	NA	NA	C	coding	810	2433	1937	4369	15.0	8	True	TTTAAA	-40
PB.3533.4	chr14	-	1340	8	full-splice_match	MED6	ENST00000256379.9	1995	8	12	643	0	-146	multi-exon	FALSE	canonical	1	242346	junction_7	96178.55483634677	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	19	759	20.0	-1	True	AATAAA	-21
PB.10950.9	chr7	-	4931	18	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	1	19209	junction_12	96253.84885498305	NA	2	NA	TRUE	NA	NA	NA	C	coding	312	939	801	1739	20.0	1	True	ATTAAA	-13
PB.10950.8	chr7	-	4559	13	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	1	11878	junction_3	89333.19627799654	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	211	1125	30.0	0	True	ATTAAA	-17
PB.3533.1	chr14	-	4342	8	full-splice_match	MED6	ENST00000256379.9	1995	8	-11	-2336	-11	4	multi-exon	FALSE	canonical	1	242346	junction_7	96178.55483634677	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	42	782	20.0	-24	True	NA	NA
PB.2148.2	chr11	+	3561	16	novel_in_catalog	ATG16L2	novel	2243	18	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	61883	junction_3	138798.7793562401	NA	2	NA	TRUE	NA	NA	NA	C	coding	420	1263	2058	3320	15.0	-44	True	NA	NA
PB.3533.3	chr14	-	3633	8	full-splice_match	MED6	ENST00000256379.9	1995	8	1	-1639	0	-693	multi-exon	FALSE	canonical	1	242346	junction_7	96178.55483634677	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	30	770	35.0	-12	True	NA	NA
PB.3533.2	chr14	-	3845	8	full-splice_match	MED6	ENST00000256379.9	1995	8	-11	-1839	-11	-493	multi-exon	FALSE	canonical	1	242346	junction_7	96178.55483634677	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	42	782	40.0	-24	True	NA	NA
PB.5958.2	chr19	+	4157	6	full-splice_match	ZNF568	ENST00000587857.5	1914	6	-125	-2118	1	311	multi-exon	FALSE	canonical	1	11446	junction_2	23366.241320332203	NA	5	NA	TRUE	NA	NA	NA	C	coding	580	1743	449	2191	50.0	-2	True	ATTAAA	-20
PB.5958.3	chr19	+	4417	7	full-splice_match	ZNF568	ENST00000333987.11	2441	7	-9	-1967	3	312	multi-exon	FALSE	canonical	1	31969	junction_2	17155.57146057481	NA	3	NA	TRUE	NA	NA	NA	C	coding	644	1935	516	2450	45.0	0	True	ATTAAA	-21
PB.10950.1	chr7	-	4938	21	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	0	83	combination_of_known_junctions	FALSE	canonical	1	11610	junction_1	111485.81574930284	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	191	1663	30.0	-1	True	AGTAAA	-18
PB.2148.3	chr11	+	2161	18	full-splice_match	ATG16L2	ENST00000321297.9	2243	18	80	2	-18	0	multi-exon	FALSE	canonical	1	61883	junction_3	138167.8718819271	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	59	1918	15.0	-44	True	NA	NA
PB.10950.7	chr7	-	4962	18	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	13897	junction_16	97330.69004930586	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	658	1761	30.0	-1	True	ATTAAA	-22
PB.10950.6	chr7	-	4873	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	38	3086	-9	0	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	200	1672	30.0	11	False	ATTAAA	-22
PB.10950.5	chr7	-	5756	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	26	2215	4	871	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	212	1684	35.0	-1	True	NA	NA
PB.10950.4	chr7	-	4551	18	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	0	941	combination_of_known_junctions	FALSE	canonical	1	55284	junction_1	67392.18959412623	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	191	1663	25.0	-1	True	NA	NA
PB.2875.8	chr12	+	4501	1	novel_in_catalog	ISCU	novel	3685	4	NA	NA	-158	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-3998	False	CATAAA	-28
PB.9287.15	chr5	+	4783	25	full-splice_match	TNPO1	ENST00000506351.6	3028	25	-62	-1693	-48	1693	multi-exon	FALSE	canonical	1	167413	junction_3	158178.21003800235	NA	1	NA	TRUE	NA	NA	NA	C	coding	890	2673	140	2812	10.0	-17	True	AATAAA	-25
PB.2875.1	chr12	+	1047	5	full-splice_match	ISCU	ENST00000311893.13	994	5	-70	17	-51	-1	multi-exon	FALSE	canonical	1	976521	junction_1	474102.3433918962	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	93	596	20.0	1	True	AATAAA	-14
PB.2875.3	chr12	+	2529	4	novel_in_catalog	ISCU	novel	3685	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1805647	junction_2	156350.64640949416	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2	True	AATAAA	-29
PB.2875.2	chr12	+	3836	3	incomplete-splice_match	ISCU	ENST00000545932.5	3685	4	-11	249	-11	0	intron_retention	FALSE	canonical	1	1805647	junction_2	156255.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6268	False	AATACA	-17
PB.2875.5	chr12	+	2559	4	full-splice_match	ISCU	ENST00000539593.1	1071	4	-14	-1474	-5	-2	multi-exon	FALSE	canonical	1	976521	junction_1	481715.46336054715	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	28	492	10.0	-8	True	AATAAA	-29
PB.2875.4	chr12	+	4086	3	incomplete-splice_match	ISCU	ENST00000545932.5	3685	4	14	-26	-5	-1	intron_retention	FALSE	canonical	1	1805647	junction_2	156255.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	AATAAA	-14
PB.2875.7	chr12	+	2244	4	novel_in_catalog	ISCU	novel	3685	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	1805647	junction_2	156350.64640949416	NA	1	NA	TRUE	NA	NA	NA	C	coding	44	135	163	297	15.0	-3	True	AATACA	-17
PB.2875.6	chr12	+	1050	6	full-splice_match	ISCU	ENST00000392807.8	1069	6	-8	27	-3	0	multi-exon	FALSE	canonical	1	45307	junction_1	966008.0971210129	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	197	625	70.0	-6	True	CATAAA	-28
PB.963.6	chr1	-	4466	8	novel_not_in_catalog	TOR1AIP2	novel	7905	6	NA	NA	0	-11	any annotated donor/acceptor	FALSE	canonical	1	18407	junction_5	96604.93012834304	NA	2	NA	TRUE	NA	NA	NA	C	coding	470	1413	925	2337	30.0	-1	True	AATAAA	-12
PB.1341.8	chr10	+	2889	11	novel_not_in_catalog	MASTL	novel	3623	12	NA	NA	-7	-96	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	63253.22002752113	NA	1	NA	TRUE	NA	NA	NA	C	coding	845	2538	65	2602	30.0	0	True	AATAAA	-13
PB.1341.9	chr10	+	2786	10	novel_in_catalog	MASTL	novel	3623	12	NA	NA	-7	-85	combination_of_known_junctions	FALSE	canonical	1	7828	junction_9	67884.78491578012	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	65	2488	20.0	0	True	AATAAA	-24
PB.1341.2	chr10	+	2523	8	incomplete-splice_match	MASTL	ENST00000375946.8	3623	12	-361	16401	-361	-16200	3prime_fragment	FALSE	canonical	1	160484	junction_7	25239.597605059123	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1557	965	2521	55.0	-16	True	GATAAA	-12
PB.1341.3	chr10	+	3204	12	novel_not_in_catalog	MASTL	novel	3623	12	NA	NA	-49	-88	any annotated donor/acceptor	FALSE	canonical	1	3055	junction_11	77281.26325078003	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	107	2503	20.0	-4870	False	AATAAA	-21
PB.1341.6	chr10	+	2890	12	full-splice_match	MASTL	ENST00000375940.8	3080	12	95	95	95	-95	multi-exon	FALSE	canonical	1	95163	junction_8	36753.22889778833	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	167	2602	30.0	-4726	False	AATAAA	-14
PB.1341.7	chr10	+	4120	12	full-splice_match	MASTL	ENST00000375940.8	3080	12	-7	-1033	-7	1028	multi-exon	FALSE	canonical	1	95163	junction_8	36753.22889778833	NA	7	NA	TRUE	NA	NA	NA	C	coding	879	2640	65	2704	35.0	0	True	AATAAA	-17
PB.1341.4	chr10	+	1453	8	incomplete-splice_match	MASTL	ENST00000375940.8	3080	12	-31	16595	-31	-16394	3prime_fragment	FALSE	canonical	1	160484	junction_7	25239.597605059123	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1365	89	1453	70.0	-4852	False	AAAAAG	-32
PB.1341.5	chr10	+	2981	11	full-splice_match	MASTL	ENST00000342386.10	2968	11	-18	5	-18	0	multi-exon	FALSE	canonical	1	16386	junction_9	60269.61450556989	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	76	2598	25.0	-11	True	AATAAA	-17
PB.2403.6	chr12	+	2111	9	full-splice_match	RAD51AP1	ENST00000352618.8	2113	9	1	1	1	0	multi-exon	FALSE	canonical	1	99648	junction_3	56859.10321671786	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	50	1057	10.0	-16	True	ATTAAA	-16
PB.2403.7	chr12	+	1944	8	novel_in_catalog	RAD51AP1	novel	707	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	10221	junction_7	86626.68330207712	NA	5	1	TRUE	NA	NA	NA	C	coding	285	858	34	891	15.0	0	True	ATTAAA	-15
PB.2403.4	chr12	+	4485	8	novel_in_catalog	RAD51AP1	novel	707	6	NA	NA	-5	0	intron_retention	FALSE	canonical	1	15464	junction_3	81309.92954800809	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	280	1005	10.0	-29	True	ATTAAA	-16
PB.2403.5	chr12	+	1688	9	full-splice_match	RAD51AP1	ENST00000352618.8	2113	9	-2	427	-2	-61	multi-exon	FALSE	canonical	1	99648	junction_3	56859.10321671786	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	53	1060	20.0	-19	True	AATAAA	-15
PB.2403.2	chr12	+	2187	10	full-splice_match	RAD51AP1	ENST00000228843.13	2163	10	-25	1	-4	-1	multi-exon	FALSE	canonical	1	27168	junction_3	80781.11530244042	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	76	1134	15.0	-42	True	ATTAAA	-15
PB.2403.3	chr12	+	2022	8	novel_in_catalog	RAD51AP1	novel	707	6	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	12884	junction_3	81409.85206036057	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	313	966	15.0	-35	True	ATTAAA	-18
PB.7878.5	chr22	+	1512	9	novel_not_in_catalog	TRABD	novel	2272	10	NA	NA	1	-3	intron_retention	FALSE	canonical	1	39361	junction_7	321706.6671099379	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	118	834	15.0	-3	True	AATAAA	-17
PB.2403.1	chr12	+	2023	9	full-splice_match	RAD51AP1	ENST00000352618.8	2113	9	-27	117	-6	-87	multi-exon	FALSE	canonical	1	99648	junction_3	56859.10321671786	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	78	1085	40.0	-44	True	AATAAA	-11
PB.8425.23	chr3	+	3993	13	full-splice_match	ARMC8	ENST00000471453.5	2910	13	3	-1086	1	1056	multi-exon	FALSE	canonical	1	108376	junction_2	109183.31857540735	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	142	1299	45.0	1	True	AATGAA	-6
PB.8425.22	chr3	+	1733	13	full-splice_match	ARMC8	ENST00000471453.5	2910	13	2	1175	0	0	multi-exon	FALSE	canonical	1	108376	junction_2	109183.31857540735	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	143	1300	20.0	0	True	AATAAA	-18
PB.8425.21	chr3	+	1661	12	novel_not_in_catalog	ARMC8	novel	4728	21	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	150659.92717331232	NA	6	2	TRUE	NA	NA	NA	C	coding	357	1074	155	1228	20.0	0	True	AATAAA	-18
PB.8425.20	chr3	+	2494	21	full-splice_match	ARMC8	ENST00000461822.5	2221	21	14	-287	0	0	multi-exon	FALSE	canonical	1	21673	junction_10	107584.99660547469	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	25	1845	90.0	0	True	AATATA	-41
PB.11219.1	chr8	-	1696	1	antisense	novelGene_WWP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7265.28	chr20	-	2725	19	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	4447	junction_18	455389.1231185096	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	756	1859	30.0	-10	True	AATAAA	-13
PB.7265.29	chr20	-	2813	17	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	-2	-9	any annotated donor/acceptor	FALSE	canonical	1	1093	junction_16	479626.4485191794	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	378	1952	45.0	-1	True	AATAAA	-8
PB.11827.8	chr9	+	1717	8	full-splice_match	SET	ENST00000322030.12	2915	8	340	858	340	636	multi-exon	FALSE	canonical	1	178448	junction_4	712125.1037060032	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	18	851	25.0	-5194	False	AATAAA	-16
PB.4296.1	chr16	+	1807	5	full-splice_match	TMEM159	ENST00000233047.8	2014	5	217	-10	-67	10	multi-exon	FALSE	canonical	1	129032	junction_1	96511.7110079782	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	252	737	10.0	-85	False	AATAAA	-37
PB.6265.4	chr19	+	2388	7	full-splice_match	ZNF274	ENST00000345813.7	2678	7	297	-7	-10	-1	multi-exon	FALSE	canonical	1	2932	junction_3	69516.40393860686	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	105	1970	20.0	-37	True	AATAAA	-21
PB.493.5	chr1	+	4623	7	incomplete-splice_match	IFI44	ENST00000370747.8	1687	9	-4	3	-4	-3	intron_retention	FALSE	canonical	1	315311	junction_1	107572.42399373962	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	90	1328	25.0	-4	True	AATAAA	-21
PB.2049.6	chr11	+	2098	8	incomplete-splice_match	DPF2	ENST00000528416.5	2799	11	7642	270	-91	0	5prime_fragment	FALSE	canonical	1	224272	junction_3	166181.73760159602	NA	0	NA	TRUE	NA	NA	NA	C	coding	79	240	639	878	10.0	7529	False	AATAAA	-14
PB.6265.5	chr19	+	2350	7	novel_in_catalog	ZNF274	novel	2539	5	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	6749	junction_2	70601.74128085573	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	286	1932	20.0	-30	True	AATAAA	-21
PB.11662.5	chr9	+	2634	8	incomplete-splice_match	MFSD14B	ENST00000375344.7	3420	12	66433	123	-5870	0	5prime_fragment	FALSE	canonical	1	380594	junction_4	49575.50416263653	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	15	1127	5.0	NA	False	AATAAA	-19
PB.8601.38	chr3	+	3101	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	139	3088	2	-685	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	96	2978	45.0	-9	True	AATAAA	-11
PB.222.2	chr1	-	1759	9	full-splice_match	DNAJC8	ENST00000263697.5	1759	9	-4	4	-4	-4	multi-exon	FALSE	canonical	1	161763	junction_6	350893.9754503622	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	32	793	30.0	-1	True	NA	NA
PB.8617.10	chr3	-	5252	9	novel_in_catalog	PCYT1A	novel	724	6	NA	NA	7	-396	combination_of_known_junctions	FALSE	canonical	1	58316	junction_8	147477.8576824649	NA	6	NA	TRUE	NA	NA	NA	C	coding	367	1104	225	1328	40.0	-68	True	ATTAAA	-13
PB.6265.8	chr19	+	6690	6	novel_in_catalog	ZNF274	novel	2539	5	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	46045	junction_1	57924.692520547746	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	68	814	20.0	0	True	AATAAA	-20
PB.10466.11	chr7	-	2295	4	novel_not_in_catalog	FKBP14	novel	4960	4	NA	NA	-18	-2219	any annotated donor/acceptor	FALSE	canonical	1	2885	junction_1	79582.26238441719	NA	10	NA	TRUE	NA	NA	NA	C	coding	181	546	195	740	60.0	-5	True	ATTAAA	-12
PB.10466.10	chr7	-	1798	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	19	3143	-3	558	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	158	793	45.0	32	True	AATAAA	-16
PB.6265.9	chr19	+	5205	7	novel_in_catalog	ZNF274	novel	2539	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	46045	junction_1	52877.768357526424	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	68	814	20.0	0	True	AATAAA	-21
PB.8617.12	chr3	-	3076	9	full-splice_match	PCYT1A	ENST00000431016.5	1482	9	110	-1704	-9	1704	multi-exon	FALSE	canonical	1	259432	junction_7	101017.94275245116	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	132	1235	65.0	-58	True	NA	NA
PB.6685.1	chr2	-	2275	20	full-splice_match	NPHP1	ENST00000445609.6	2513	20	-16	254	-7	-2	multi-exon	FALSE	canonical	1	12156	junction_12	10798.294417236903	NA	1	NA	TRUE	NA	NA	NA	A	coding	677	2034	41	2074	40.0	-17	True	AATAAA	-12
PB.11814.1	chr9	+	3129	10	full-splice_match	SLC25A25	ENST00000373068.6	3431	10	302	0	210	0	multi-exon	FALSE	canonical	1	97897	junction_1	68955.62283539526	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	229	1329	25.0	20	True	AATAAA	-16
PB.11284.51	chr8	-	2376	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-186	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	560978.3678417456	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	720	1811	15.0	-2	True	AATAAA	-12
PB.4420.8	chr16	+	5967	26	novel_in_catalog	ADCY7	novel	578	3	NA	NA	1	-238	no_combination_of_known_junctions	FALSE	canonical	1	30188	junction_1	56049.0489405699	NA	0	NA	TRUE	NA	NA	NA	C	coding	1080	3243	336	3578	75.0	-16	True	NA	NA
PB.222.3	chr1	-	1605	10	full-splice_match	DNAJC8	ENST00000489277.5	1600	10	-5	0	-5	0	multi-exon	FALSE	canonical	1	41535	junction_8	174185.238231184	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-12
PB.4420.5	chr16	+	2622	19	novel_in_catalog	ADCY7	novel	578	3	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	16487	junction_18	64159.51142599855	NA	5	NA	TRUE	NA	NA	NA	C	coding	734	2205	388	2592	20.0	11	True	AATAAA	-23
PB.4420.4	chr16	+	4265	26	novel_in_catalog	ADCY7	novel	578	3	NA	NA	1	392	combination_of_known_junctions	FALSE	canonical	1	28399	junction_1	56249.587550999866	NA	0	NA	TRUE	NA	NA	NA	C	coding	1080	3243	398	3640	20.0	1	True	AATACA	-15
PB.4420.7	chr16	+	6214	26	novel_in_catalog	ADCY7	novel	578	3	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	30188	junction_1	56049.0489405699	NA	2	NA	TRUE	NA	NA	NA	C	coding	1080	3243	345	3587	40.0	-25	True	ATTAAA	-20
PB.4420.6	chr16	+	5446	23	novel_in_catalog	ADCY7	novel	578	3	NA	NA	17	0	no_combination_of_known_junctions	FALSE	canonical	1	2366	junction_1	58615.77526487978	NA	2	1	TRUE	NA	NA	NA	C	coding	880	2643	177	2819	40.0	17	True	ATTAAA	-20
PB.4420.1	chr16	+	6291	26	novel_in_catalog	ADCY7	novel	578	3	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	1	28399	junction_1	56249.587550999866	NA	2	NA	TRUE	NA	NA	NA	C	coding	1080	3243	422	3664	40.0	-7620	False	ATTAAA	-20
PB.4420.3	chr16	+	4230	26	full-splice_match	ADCY7	ENST00000394697.6	6213	26	31	1952	-4	445	multi-exon	FALSE	canonical	1	13657	junction_1	57956.438704254426	NA	1	NA	TRUE	NA	NA	NA	C	coding	1080	3243	310	3552	20.0	-4	True	CATAAA	-18
PB.4420.2	chr16	+	6038	26	novel_in_catalog	ADCY7	novel	578	3	NA	NA	5	-235	combination_of_known_junctions	FALSE	canonical	1	28399	junction_1	56249.587550999866	NA	1	1	TRUE	NA	NA	NA	C	coding	1080	3243	404	3646	75.0	-5	True	NA	NA
PB.11256.11	chr8	+	1429	8	incomplete-splice_match	MTDH	ENST00000519934.5	2184	11	-241	11528	126	-5372	3prime_fragment	FALSE	canonical	1	174118	junction_6	373159.33556657773	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1227	203	1429	90.0	-172	False	GATAAA	-37
PB.11814.2	chr9	+	3319	10	full-splice_match	SLC25A25	ENST00000373064.9	3474	10	154	1	-79	0	multi-exon	FALSE	canonical	1	90400	junction_1	70812.21259669484	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	110	1519	25.0	0	True	AATAAA	-16
PB.1004.1	chr1	-	1705	1	novel_in_catalog	AL390957.1	novel	1042	8	NA	NA	69544	-40094	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	9646	False	NA	NA
PB.3961.14	chr15	-	2599	22	novel_in_catalog	PARP6	novel	516	3	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	57345	junction_21	135205.31481660623	NA	0	NA	TRUE	NA	NA	NA	B	coding	420	1263	710	1972	70.0	-1	True	NA	NA
PB.11827.4	chr9	+	2179	1	novel_in_catalog	SET	novel	2850	8	NA	NA	175	2017	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	148	447	1542	1988	70.0	1	True	NA	NA
PB.3961.13	chr15	-	2759	23	novel_in_catalog	PARP6	novel	516	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	13578	junction_22	133894.78383543863	NA	1	NA	TRUE	NA	NA	NA	B	coding	499	1500	757	2256	70.0	-6	True	NA	NA
PB.3961.10	chr15	-	2602	22	novel_in_catalog	PARP6	novel	516	3	NA	NA	17	-5	combination_of_known_junctions	FALSE	canonical	1	57345	junction_21	144430.01980844728	NA	0	NA	TRUE	NA	NA	NA	B	coding	440	1323	622	1944	25.0	-1	True	AATAAA	-25
PB.3961.11	chr15	-	2540	23	novel_not_in_catalog	PARP6	novel	516	3	NA	NA	22	-5	any annotated donor/acceptor	FALSE	canonical	1	12216	junction_22	134071.60289891477	NA	0	NA	TRUE	NA	NA	NA	B	coding	499	1500	507	2006	25.0	4	True	AATAAA	-25
PB.1021.14	chr1	+	2877	1	novel_in_catalog	NEK7	novel	4149	10	NA	NA	-16256	-51855	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-2423	False	NA	NA
PB.11651.2	chr9	+	1920	13	incomplete-splice_match	FGD3	ENST00000468206.6	3057	18	-31	15649	-31	2373	3prime_fragment	FALSE	canonical	1	106045	junction_2	59645.60370965231	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1641	278	1918	70.0	-28	True	NA	NA
PB.3335.1	chr14	+	1276	8	full-splice_match	DHRS4	ENST00000313250.9	1443	8	164	3	16	-3	multi-exon	FALSE	canonical	1	6522	junction_4	123065.99194591759	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	40	876	30.0	-20	True	AATAAA	-23
PB.516.2	chr1	-	1479	4	full-splice_match	SELENOF	ENST00000370554.5	1220	4	18	-277	10	-1	multi-exon	FALSE	canonical	1	186719	junction_1	1025343.0955578831	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	8	True	ATTAAA	-18
PB.3335.2	chr14	+	2755	7	incomplete-splice_match	DHRS4	ENST00000313250.9	1443	8	171	7	-13	-7	intron_retention	FALSE	canonical	1	6522	junction_4	115534.89199467935	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	87	758	25.0	-13	True	AATAAA	-19
PB.516.3	chr1	-	1270	5	full-splice_match	SELENOF	ENST00000331835.9	1781	5	233	278	2	2	multi-exon	FALSE	canonical	1	2335336	junction_3	27346.506513629854	NA	0	NA	TRUE	NA	NA	NA	C	coding	95	288	22	309	25.0	-8	True	AATAAA	-15
PB.1631.1	chr10	+	3249	3	full-splice_match	INA	ENST00000369849.8	3231	3	-25	7	-25	-7	multi-exon	TRUE	canonical	1	275777	junction_1	19719.5	NA	3	NA	TRUE	NA	NA	NA	A	coding	499	1500	75	1574	25.0	0	True	AATAAA	-24
PB.6781.11	chr2	-	2047	2	novel_not_in_catalog	ARL5A	novel	1268	9	NA	NA	9	1256	any annotated donor/acceptor	FALSE	canonical	1	932	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-9	True	AATAAA	-16
PB.6781.10	chr2	-	1905	2	novel_not_in_catalog	ARL5A	novel	1268	9	NA	NA	7	1257	any annotated donor/acceptor	FALSE	canonical	1	3714	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	43	132	283	414	25.0	9229	False	AATAAA	-17
PB.516.1	chr1	-	1760	5	full-splice_match	SELENOF	ENST00000331835.9	1781	5	18	3	18	-1	multi-exon	FALSE	canonical	1	2335336	junction_3	27346.506513629854	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-20	True	ATTAAA	-18
PB.3670.14	chr14	-	1748	9	incomplete-splice_match	HSP90AA1	ENST00000216281.12	3379	11	122	2387	-25	317	3prime_fragment	FALSE	canonical	1	882781	junction_7	1548848.1037511344	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1662	85	1746	60.0	496	False	NA	NA
PB.3670.17	chr14	-	768	5	incomplete-splice_match	HSP90AA1	ENST00000216281.12	3379	11	147	4215	0	-20	3prime_fragment	FALSE	canonical	1	882781	junction_3	1886850.65673232	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	708	60	767	70.0	-1	True	NA	NA
PB.3670.16	chr14	-	912	5	incomplete-splice_match	HSP90AA1	ENST00000216281.12	3379	11	14	4204	14	-9	3prime_fragment	FALSE	canonical	1	882781	junction_3	1886850.65673232	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	720	193	912	80.0	388	False	NA	NA
PB.11651.3	chr9	+	2566	15	incomplete-splice_match	FGD3	ENST00000468206.6	3057	18	-22	5608	-22	-4005	3prime_fragment	FALSE	canonical	1	106045	junction_2	55703.6110299917	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	599	2092	30.0	-19	True	ATTAAA	-29
PB.8443.3	chr3	-	10098	41	full-splice_match	XRN1	ENST00000392981.6	5383	41	-66	-4649	4	-5	multi-exon	FALSE	canonical	1	110988	junction_4	43183.639820075376	NA	1	1	TRUE	NA	NA	NA	C	coding	1694	5085	115	5199	15.0	10	False	ATTAAA	-17
PB.8443.8	chr3	-	5300	40	novel_in_catalog	XRN1	novel	10143	42	NA	NA	-9	-14	no_combination_of_known_junctions	TRUE	canonical	1	28572	junction_3	47937.75429090273	NA	0	NA	TRUE	NA	NA	NA	C	coding	1656	4971	94	5064	70.0	-1	True	NA	NA
PB.8443.9	chr3	-	4271	36	incomplete-splice_match	XRN1	ENST00000264951.8	10143	42	47	25787	-3	-2910	3prime_fragment	FALSE	canonical	1	24912	junction_1	49669.22362393116	NA	1	1	TRUE	NA	NA	NA	C	coding	1400	4200	72	4271	65.0	1	True	NA	NA
PB.775.5	chr1	-	3434	7	novel_in_catalog	TPM3	novel	3149	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	380074	junction_3	765885.947367147	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	91	912	25.0	-2	True	AATAAA	-22
PB.775.4	chr1	-	4101	5	full-splice_match	TPM3	ENST00000469717.5	4041	5	-60	0	1	0	multi-exon	FALSE	canonical	1	20336	junction_4	942978.1529305172	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	1226	1579	25.0	0	True	AATAAA	-22
PB.775.7	chr1	-	2172	9	full-splice_match	TPM3	ENST00000328159.8	1771	9	-67	-334	-5	-1	multi-exon	FALSE	canonical	1	96813	junction_1	743372.425071955	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	68	814	25.0	0	True	AATAAA	-21
PB.775.6	chr1	-	2035	8	full-splice_match	TPM3	ENST00000368533.7	3131	8	38	1058	-4	0	multi-exon	FALSE	canonical	1	380074	junction_4	711882.2453578074	NA	3	NA	TRUE	NA	NA	NA	C	coding	248	747	16	762	30.0	8965	False	AATAAA	-15
PB.775.1	chr1	-	3168	8	full-splice_match	TPM3	ENST00000368533.7	3131	8	-34	-3	-1	-1	multi-exon	FALSE	canonical	1	380074	junction_4	711882.2453578074	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	88	834	5.0	1	True	ATTAAA	-34
PB.775.3	chr1	-	4225	6	novel_in_catalog	TPM3	novel	3149	7	NA	NA	8	0	intron_retention	FALSE	canonical	1	511486	junction_5	748331.0345002671	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	79	537	25.0	8902	False	AATAAA	-22
PB.775.2	chr1	-	1720	5	novel_not_in_catalog	TPM3	novel	3149	7	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	591857.3599383448	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	72	521	25.0	-4	True	AATAAA	-24
PB.8917.2	chr4	-	3315	24	full-splice_match	TBCK	ENST00000361687.8	3312	24	-7	4	-2	-4	multi-exon	FALSE	canonical	1	7165	junction_21	38313.117560567036	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	337	2829	30.0	-3	True	AATAAA	-27
PB.775.8	chr1	-	1760	7	novel_not_in_catalog	TPM3	novel	3149	7	NA	NA	-6	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	512757.7504977104	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	69	734	20.0	-1	True	AATAAA	-18
PB.6111.1	chr19	+	2452	6	novel_not_in_catalog	SELENOW	novel	888	6	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1129658.2827360493	NA	4	1	TRUE	NA	NA	NA	A	coding	99	300	1517	1816	20.0	5	True	AATAAA	-18
PB.5164.8	chr17	-	3911	25	full-splice_match	INTS2	ENST00000251334.6	4255	25	34	310	20	-310	multi-exon	FALSE	canonical	1	36148	junction_24	21675.92232654927	NA	2	NA	TRUE	NA	NA	NA	C	coding	1196	3588	323	3910	70.0	-3	True	AATAAA	-21
PB.1155.33	chr1	-	2220	1	novel_in_catalog	LBR	novel	3745	14	NA	NA	-2630	-5266	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-9580	False	NA	NA
PB.763.1	chr1	+	3752	5	novel_in_catalog	CHTOP	novel	1840	4	NA	NA	-13	0	intron_retention	FALSE	canonical	1	424822	junction_2	121274.11574713707	NA	1	1	TRUE	NA	NA	NA	C	coding	224	675	2042	2716	20.0	-44	False	NA	NA
PB.5164.3	chr17	-	6121	25	full-splice_match	INTS2	ENST00000251334.6	4255	25	11	-1877	2	-2	multi-exon	FALSE	canonical	1	36148	junction_24	21675.92232654927	NA	1	NA	TRUE	NA	NA	NA	C	coding	1196	3591	346	3936	20.0	1	True	TATAAA	-20
PB.5164.2	chr17	-	5858	25	full-splice_match	INTS2	ENST00000647009.1	5837	25	0	-21	0	1	multi-exon	TRUE	canonical	1	14121	junction_24	24718.957545553756	NA	1	NA	TRUE	NA	NA	NA	C	coding	1196	3591	80	3670	15.0	-1	True	TATAAA	-23
PB.8917.1	chr4	-	3531	26	full-splice_match	TBCK	ENST00000394708.6	3047	26	-10	-474	-10	-1	multi-exon	FALSE	canonical	1	102145	junction_17	26351.836107079904	NA	3	NA	TRUE	NA	NA	NA	C	coding	893	2682	376	3057	40.0	-42	False	AATAAA	-15
PB.5164.7	chr17	-	4824	25	full-splice_match	INTS2	ENST00000251334.6	4255	25	11	-580	2	580	multi-exon	FALSE	canonical	1	36148	junction_24	21675.92232654927	NA	28	3	TRUE	NA	NA	NA	C	coding	1196	3591	346	3936	15.0	1	True	AATAAA	-19
PB.5164.6	chr17	-	5014	25	full-splice_match	INTS2	ENST00000251334.6	4255	25	9	-768	0	768	multi-exon	FALSE	canonical	1	36148	junction_24	21675.92232654927	NA	0	NA	TRUE	NA	NA	NA	C	coding	1196	3591	348	3938	65.0	-1	True	NA	NA
PB.5164.4	chr17	-	5847	25	novel_not_in_catalog	INTS2	novel	5805	25	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	24	junction_24	26864.75957299694	NA	4	1	TRUE	NA	NA	NA	C	coding	1196	3591	74	3664	30.0	-1	True	TATAAA	-18
PB.541.10	chr1	+	3904	14	full-splice_match	MTF2	ENST00000370303.4	1951	14	-26	-1927	2	-1	multi-exon	FALSE	canonical	1	54032	junction_10	87701.96045652092	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	243	1853	20.0	2	True	ATTAAA	-38
PB.11631.18	chr9	-	2814	13	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-88	35238	-46	431	3prime_fragment	FALSE	canonical	1	143907	junction_7	96266.90517110344	NA	3	NA	TRUE	NA	NA	NA	C	coding	851	2553	262	2814	50.0	-1	True	NA	NA
PB.763.5	chr1	+	2745	4	novel_in_catalog	CHTOP	novel	1840	4	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	42757	junction_3	291799.6360453903	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	2012	2545	5.0	-14	True	NA	NA
PB.963.1	chr1	-	6969	6	full-splice_match	TOR1AIP2	ENST00000367612.7	7905	6	-4	940	0	-940	multi-exon	TRUE	canonical	1	21447	junction_4	75432.50222709042	NA	7	NA	TRUE	NA	NA	NA	C	coding	470	1413	393	1805	35.0	-1	True	AATAAA	-28
PB.9832.9	chr6	+	2267	4	novel_in_catalog	HLA-F	novel	1544	8	NA	NA	11	-4	intron_retention	FALSE	canonical	1	689657	junction_1	429814.96910983557	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	676	1323	35.0	2	True	AATAAA	-23
PB.6586.1	chr2	+	460	3	full-splice_match	TMSB10	ENST00000233143.5	496	3	31	5	31	-5	multi-exon	FALSE	canonical	1	36882011	junction_2	8867672.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	0	True	AATAAA	-15
PB.9832.8	chr6	+	3676	4	novel_in_catalog	HLA-F	novel	1544	8	NA	NA	11	1830	intron_retention	FALSE	canonical	1	13110	junction_3	748704.7864363274	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	806	1468	35.0	2	True	NA	NA
PB.11186.5	chr8	-	3874	5	full-splice_match	UBE2W	ENST00000422906.6	3903	5	24	5	3	-5	multi-exon	FALSE	canonical	1	8733	junction_3	62129.40805286978	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	8	True	AATAAA	-19
PB.3317.9	chr14	-	2080	18	novel_not_in_catalog	PRMT5	novel	2531	17	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	319733.2006722876	NA	1	1	TRUE	NA	NA	NA	C	coding	595	1788	25	1812	15.0	-1	True	AATAAA	-21
PB.11186.7	chr8	-	2215	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-14	0	-14	0	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	18	473	70.0	20	True	NA	NA
PB.11186.6	chr8	-	3915	7	novel_not_in_catalog	AC022826.2	novel	776	8	NA	NA	16	-101922	any annotated donor/acceptor	FALSE	canonical	1	5026	junction_3	81173.06818972247	NA	1	NA	TRUE	NA	NA	NA	A	coding	165	498	17	514	20.0	21	True	AATAAA	-16
PB.11186.1	chr8	-	4562	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-78	-2283	6	528	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	82	537	30.0	-44	False	NA	NA
PB.5073.4	chr17	-	1764	7	full-splice_match	SCRN2	ENST00000407215.7	1779	7	16	-1	-6	1	multi-exon	FALSE	canonical	1	305851	junction_6	32445.14931773315	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	67	1203	25.0	-13	True	AATAAA	-16
PB.3317.8	chr14	-	2149	18	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	47994	junction_17	318120.69625704293	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	167	1996	15.0	-16	True	AATAAA	-21
PB.5073.5	chr17	-	3112	3	novel_in_catalog	SCRN2	novel	1779	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	305851	junction_2	42147.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	1864	2286	20.0	-1	True	AATAAA	-15
PB.11186.9	chr8	-	1894	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-19	326	10	-323	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	23	478	35.0	15	True	TATAAA	-18
PB.11186.8	chr8	-	2137	5	full-splice_match	UBE2W	ENST00000422906.6	3903	5	39	1727	-11	28	multi-exon	FALSE	canonical	1	8733	junction_3	62129.40805286978	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	23	True	ATTAAA	-14
PB.9666.1	chr5	-	4867	11	novel_in_catalog	HNRNPH1	novel	2279	14	NA	NA	4	0	intron_retention	FALSE	canonical	1	1385982	junction_10	860113.697696415	NA	2	NA	TRUE	NA	NA	NA	C	coding	286	861	3226	4086	5.0	5	True	AATAAA	-20
PB.11007.4	chr8	+	2841	14	full-splice_match	ATP6V1B2	ENST00000276390.6	2875	14	26	8	-10	4	multi-exon	FALSE	canonical	1	378440	junction_1	227778.20195142654	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	15	1550	35.0	12	True	AATAAA	-20
PB.11007.7	chr8	+	2357	9	incomplete-splice_match	ATP6V1B2	ENST00000276390.6	2875	14	13809	16	-7006	-4	5prime_fragment	FALSE	canonical	1	878172	junction_2	144762.37076104886	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	43	1074	40.0	-1533	False	AATAAA	-12
PB.9832.4	chr6	+	2402	3	incomplete-splice_match	HLA-F	ENST00000484704.5	1201	4	-756	2	9	-1	intron_retention	FALSE	canonical	1	1590592	junction_2	10653.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	808	1455	30.0	0	True	AATAAA	-26
PB.11007.1	chr8	+	4794	13	novel_in_catalog	ATP6V1B2	novel	2875	14	NA	NA	-14	5	intron_retention	FALSE	canonical	1	378440	junction_1	234379.90573975487	NA	5	NA	TRUE	NA	NA	NA	C	coding	318	957	55	1011	35.0	-3732	False	AATAAA	-21
PB.1765.10	chr11	-	2615	17	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	1	10764	junction_14	491618.175324321	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	281	1441	15.0	-33	True	ATTAAA	-19
PB.11007.3	chr8	+	2984	13	novel_in_catalog	ATP6V1B2	novel	2875	14	NA	NA	16	-4	intron_retention	FALSE	canonical	1	378440	junction_1	236290.1766961047	NA	17	1	TRUE	NA	NA	NA	C	coding	358	1077	613	1689	25.0	2	True	AATAAA	-24
PB.11007.2	chr8	+	1696	14	full-splice_match	ATP6V1B2	ENST00000276390.6	2875	14	12	1167	12	-1155	multi-exon	FALSE	canonical	1	378440	junction_1	227778.20195142654	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	29	1564	25.0	-2	True	ATTAAA	-15
PB.9832.3	chr6	+	2911	4	novel_in_catalog	HLA-F	novel	1544	8	NA	NA	9	-1	intron_retention	FALSE	canonical	1	39945	junction_1	736055.5145861396	NA	4	NA	TRUE	NA	NA	NA	C	coding	215	648	546	1193	25.0	0	True	NA	NA
PB.5640.1	chr19	-	3194	18	full-splice_match	LONP1	ENST00000360614.7	3236	18	40	2	40	-1	multi-exon	TRUE	canonical	1	571145	junction_17	201545.15817238967	NA	0	NA	TRUE	NA	NA	NA	A	coding	845	2538	461	2998	10.0	-10	False	ATTAAA	-12
PB.7510.4	chr21	-	2919	11	full-splice_match	SETD4	ENST00000481477.5	2761	11	-159	1	6	0	multi-exon	FALSE	canonical	1	15487	junction_7	44842.749438454375	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	235	624	15.0	5	True	ATTAAA	-16
PB.2746.5	chr12	+	1884	8	full-splice_match	RAP1B	ENST00000250559.13	13438	8	184	11370	-2	9	multi-exon	FALSE	canonical	1	271	junction_7	166209.0632559132	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	48	602	20.0	-9599	False	AATAAA	-42
PB.2746.6	chr12	+	4052	7	incomplete-splice_match	RAP1B	ENST00000250559.13	13438	8	67	11381	-2	-2	intron_retention	FALSE	canonical	1	341	junction_6	170216.48846632207	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	165	719	30.0	7	True	AATAAA	-31
PB.2746.7	chr12	+	1630	8	full-splice_match	RAP1B	ENST00000250559.13	13438	8	67	11741	-2	36	multi-exon	FALSE	canonical	1	271	junction_7	166209.0632559132	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	165	719	20.0	7	True	AATATA	-24
PB.2746.1	chr12	+	1207	8	full-splice_match	RAP1B	ENST00000250559.13	13438	8	-3	12234	-3	20	multi-exon	FALSE	canonical	1	271	junction_7	166209.0632559132	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	235	789	40.0	-9786	False	AATAAA	-23
PB.2746.2	chr12	+	2113	9	novel_not_in_catalog	RAP1B	novel	13438	8	NA	NA	11	-3	any annotated donor/acceptor	FALSE	canonical	1	19	junction_1	75672.94806342208	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	289	843	30.0	-30	True	AATAAA	-30
PB.2746.3	chr12	+	2142	9	novel_in_catalog	RAP1B	novel	13438	8	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	1	271	junction_8	77140.42259047781	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	313	867	20.0	-25	True	AATAAA	-35
PB.2746.8	chr12	+	2200	9	novel_in_catalog	RAP1B	novel	13438	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	271	junction_8	75199.8344486833	NA	3	1	TRUE	NA	NA	NA	C	coding	184	555	375	929	30.0	9	True	AATAAA	-31
PB.2746.9	chr12	+	1934	8	full-splice_match	RAP1B	ENST00000250559.13	13438	8	69	11435	0	-56	multi-exon	FALSE	canonical	1	271	junction_7	166209.0632559132	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	163	717	35.0	9	True	ATTAAA	-19
PB.2908.8	chr12	+	3845	20	novel_in_catalog	ACAD10	novel	622	2	NA	NA	2	1	intron_retention	FALSE	canonical	1	8286	junction_18	37628.44078089215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	188	3223	10.0	10	True	AGTAAA	-11
PB.8955.13	chr4	+	4779	16	novel_in_catalog	USP53	novel	4233	2	NA	NA	-28	-11	no_combination_of_known_junctions	FALSE	canonical	1	24449	junction_2	46071.53729273157	NA	0	NA	TRUE	NA	NA	NA	B	coding	957	2874	490	3363	20.0	0	True	AATAAA	-11
PB.2908.1	chr12	+	4143	22	novel_in_catalog	ACAD10	novel	622	2	NA	NA	-3	1	intron_retention	TRUE	canonical	1	6185	junction_16	40374.50505302379	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	201	3518	5.0	-3	True	AGTAAA	-14
PB.2908.2	chr12	+	4099	22	full-splice_match	ACAD10	ENST00000455480.6	4071	22	-23	-5	-3	0	multi-exon	FALSE	canonical	1	5806	junction_6	38999.59760737814	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3273	201	3473	10.0	-3	True	AGTAAA	-15
PB.2908.3	chr12	+	4022	21	full-splice_match	ACAD10	ENST00000313698.8	3959	21	-45	-18	-3	8	multi-exon	FALSE	canonical	1	46653	junction_1	29391.77749490493	NA	0	NA	TRUE	NA	NA	NA	C	coding	1059	3180	201	3380	45.0	-3	True	AGTAAA	-31
PB.2908.4	chr12	+	3705	19	novel_in_catalog	ACAD10	novel	622	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	6594	junction_9	38161.68756770895	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	198	3080	5.0	0	True	AGTAAA	-14
PB.2908.5	chr12	+	3669	19	novel_in_catalog	ACAD10	novel	622	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	6327	junction_8	37949.876262424536	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2847	198	3044	5.0	0	True	AGTAAA	-14
PB.2908.6	chr12	+	4082	22	novel_not_in_catalog	ACAD10	novel	622	2	NA	NA	1	1	intron_retention	FALSE	canonical	1	4748	junction_6	39125.18771341522	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	197	3457	5.0	1	True	AGTAAA	-14
PB.2908.7	chr12	+	3854	20	novel_in_catalog	ACAD10	novel	622	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	15389	junction_13	36105.802761350584	NA	6	NA	TRUE	NA	NA	NA	C	coding	1012	3039	190	3228	10.0	8	True	AGTAAA	-15
PB.4342.1	chr16	+	2422	12	novel_not_in_catalog	SPNS1	novel	829	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	24282	junction_3	181744.03468187418	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	1146	2174	5.0	-12	True	AATAAA	-18
PB.8389.4	chr3	+	2576	20	novel_not_in_catalog	COPG1	novel	3078	24	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	382104.6893538029	NA	2	1	TRUE	NA	NA	NA	C	coding	706	2121	105	2225	20.0	0	True	AATAAA	-22
PB.4929.2	chr17	-	3864	15	full-splice_match	DDX52	ENST00000617633.4	6362	15	20	2478	1	857	multi-exon	FALSE	canonical	1	228023	junction_14	45027.76992743206	NA	2	NA	TRUE	NA	NA	NA	C	coding	599	1800	25	1824	80.0	-5	True	NA	NA
PB.9543.9	chr5	-	3820	31	novel_in_catalog	LARS	novel	4766	32	NA	NA	8	0	intron_retention	FALSE	canonical	1	9118	junction_19	277545.8370482833	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	149	3625	30.0	8	True	AATAAA	-16
PB.10762.4	chr7	-	2184	18	novel_in_catalog	DNAJC2	novel	1846	15	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	57855	junction_14	179921.8840775458	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	882	2138	40.0	-1	True	AATAAA	-14
PB.10762.5	chr7	-	1483	13	incomplete-splice_match	DNAJC2	ENST00000379263.7	2167	17	36	4470	-7	-286	3prime_fragment	FALSE	canonical	1	289109	junction_8	106475.18200615134	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1266	216	1481	55.0	9	False	NA	NA
PB.10762.2	chr7	-	2022	17	full-splice_match	DNAJC2	ENST00000379263.7	2167	17	141	4	46	-1	multi-exon	FALSE	canonical	1	289109	junction_12	112121.18429349113	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	111	1976	40.0	34	True	AATAAA	-14
PB.10762.3	chr7	-	3268	16	novel_not_in_catalog	DNAJC2	novel	1846	15	NA	NA	8	-1	intron_retention	FALSE	canonical	1	15541	junction_11	159831.29525632816	NA	4	NA	TRUE	NA	NA	NA	C	coding	246	741	2482	3222	40.0	-4	True	AATAAA	-14
PB.10762.1	chr7	-	2328	17	full-splice_match	DNAJC2	ENST00000379263.7	2167	17	63	-224	-12	179	multi-exon	FALSE	canonical	1	289109	junction_12	112121.18429349113	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	189	2054	40.0	36	False	TATAAA	-12
PB.747.9	chr1	-	3598	11	novel_not_in_catalog	RFX5	novel	3576	11	NA	NA	4	-1	intron_retention	FALSE	canonical	1	262	junction_6	181283.71951670124	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	176	2053	5.0	0	True	NA	NA
PB.8955.15	chr4	+	2357	14	novel_in_catalog	USP53	novel	4233	2	NA	NA	-28	-1543	combination_of_known_junctions	FALSE	canonical	1	16990	junction_3	48579.599728436915	NA	2	NA	TRUE	NA	NA	NA	B	coding	469	1407	950	2356	55.0	0	True	NA	NA
PB.1619.4	chr10	+	3130	23	novel_not_in_catalog	NFKB2	novel	562	2	NA	NA	-79	0	any annotated donor/acceptor	FALSE	canonical	1	16376	junction_20	253152.35295815443	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	156	2546	15.0	-6	True	AATAAA	-42
PB.1619.5	chr10	+	1831	11	incomplete-splice_match	NFKB2	ENST00000428099.5	3416	23	415	3314	-72	-3	intron_retention	FALSE	canonical	1	58810	junction_1	274979.5366095448	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	149	1192	90.0	1	True	NA	NA
PB.1619.6	chr10	+	3596	20	novel_in_catalog	NFKB2	novel	562	2	NA	NA	29	-1	intron_retention	FALSE	canonical	1	257847	junction_11	200898.14643756638	NA	6	NA	TRUE	NA	NA	NA	C	coding	490	1473	226	1698	20.0	0	True	AATAAA	-41
PB.1619.7	chr10	+	1895	10	incomplete-splice_match	NFKB2	ENST00000369966.7	3101	23	1151	3309	42	-3	intron_retention	FALSE	canonical	1	376923	junction_1	222882.44522008445	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	213	1256	90.0	13	True	NA	NA
PB.1619.1	chr10	+	3192	23	novel_in_catalog	NFKB2	novel	562	2	NA	NA	-95	-1	combination_of_known_junctions	TRUE	canonical	1	9033	junction_1	223524.9990801822	NA	3	NA	TRUE	NA	NA	NA	C	coding	899	2700	346	3045	20.0	-22	True	AATAAA	-41
PB.1619.2	chr10	+	3381	22	novel_in_catalog	NFKB2	novel	562	2	NA	NA	-94	-1	intron_retention	FALSE	canonical	1	58810	junction_1	232615.87401189428	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	171	1643	20.0	-21	True	AATAAA	-41
PB.1619.3	chr10	+	3006	23	novel_not_in_catalog	NFKB2	novel	562	2	NA	NA	-94	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	254997.8007380166	NA	5	1	TRUE	NA	NA	NA	C	coding	633	1902	171	2072	15.0	-21	True	NA	NA
PB.11396.2	chr8	+	5201	42	novel_in_catalog	MROH1	novel	3905	31	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	37	junction_16	88875.20929708259	NA	0	NA	TRUE	NA	NA	NA	B	coding	1632	4899	118	5016	25.0	NA	False	AATAAA	-14
PB.1619.8	chr10	+	2965	23	full-splice_match	NFKB2	ENST00000189444.10	3011	23	49	-3	49	-2	multi-exon	FALSE	canonical	1	119157	junction_1	212062.6795815322	NA	1	NA	TRUE	NA	NA	NA	C	coding	899	2700	115	2814	15.0	20	True	AATAAA	-45
PB.1619.9	chr10	+	2908	22	incomplete-splice_match	NFKB2	ENST00000189444.10	3011	23	197	-3	197	-2	5prime_fragment	FALSE	canonical	1	257847	junction_11	192825.12385257764	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	58	2757	15.0	-10	True	AATAAA	-45
PB.9543.6	chr5	-	4418	32	full-splice_match	LARS	ENST00000394434.6	4766	32	141	207	1	-207	multi-exon	FALSE	canonical	1	407291	junction_27	224158.19093806596	NA	2	NA	TRUE	NA	NA	NA	C	coding	1176	3531	27	3557	60.0	9	True	NA	NA
PB.2279.3	chr11	+	3562	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	757	139	-25	-139	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	209	1846	45.0	-403	False	AATAAA	-15
PB.2279.2	chr11	+	2104	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	595	1759	1	-140	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	65	2008	25.0	-2	True	ATTAAA	-24
PB.2279.1	chr11	+	3188	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	757	513	-25	-513	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	209	1846	40.0	-403	False	AATAAA	-25
PB.2279.7	chr11	+	3614	13	novel_in_catalog	DLAT	novel	4458	14	NA	NA	4	-138	no_combination_of_known_junctions	FALSE	canonical	1	11970	junction_9	137582.2780963722	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	62	1897	45.0	1	True	AATAAA	-16
PB.2279.6	chr11	+	3046	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	632	780	6	749	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	28	1971	30.0	35	True	AGTAAA	-17
PB.2279.5	chr11	+	3616	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	558	284	-36	-284	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	102	2045	55.0	-39	True	NA	NA
PB.2279.4	chr11	+	3872	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	598	-12	4	12	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	62	2005	20.0	1	True	ATTAAA	-27
PB.9545.25	chr5	+	1833	11	full-splice_match	TCERG1	ENST00000507175.5	1984	11	17	134	-4	-134	multi-exon	FALSE	canonical	1	352318	junction_3	46175.54854422414	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1809	23	1831	65.0	-5	True	AAGAAA	-26
PB.2279.9	chr11	+	3564	14	full-splice_match	DLAT	ENST00000533297.1	2118	14	33	-1479	1	-140	multi-exon	FALSE	canonical	1	1690	junction_1	134093.44028778223	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	74	1849	40.0	30	True	AATAAA	-14
PB.2279.8	chr11	+	2673	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	612	1173	-14	356	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	48	1991	25.0	15	True	TATAAA	-22
PB.4831.3	chr17	+	2689	3	novel_not_in_catalog	CCDC144NL-AS1	novel	3727	4	NA	NA	7	-515	any annotated donor/acceptor	FALSE	canonical	1	912	junction_1	5673.5	NA	10	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	30	False	NA	NA
PB.4831.2	chr17	+	3345	3	full-splice_match	CCDC144NL-AS1	ENST00000583962.1	3352	3	7	0	7	0	multi-exon	FALSE	canonical	1	12259	junction_2	2147.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	30	False	AATAAA	-20
PB.4831.1	chr17	+	2406	3	novel_not_in_catalog	CCDC144NL-AS1	novel	3727	4	NA	NA	27	-1330	any annotated donor/acceptor	FALSE	canonical	1	3148	junction_2	6702.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1049	1390	90.0	50	False	NA	NA
PB.9287.19	chr5	+	3237	25	full-splice_match	TNPO1	ENST00000506351.6	3028	25	-48	-161	-34	161	multi-exon	FALSE	canonical	1	167413	junction_3	158178.21003800235	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	126	2798	25.0	-3	True	AATAAA	-31
PB.11810.2	chr9	-	1427	8	novel_not_in_catalog	ST6GALNAC4	novel	1691	6	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	133611.91420968235	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	261	1076	10.0	30	True	NA	NA
PB.7023.4	chr2	-	3963	16	novel_in_catalog	AC068946.2	novel	5245	22	NA	NA	-6626	-9609	no_combination_of_known_junctions	FALSE	canonical	1	24921	junction_7	147879.041090781	NA	1	1	TRUE	NA	NA	NA	B	coding	528	1587	437	2023	5.0	-21	True	AATAAA	-17
PB.2637.42	chr12	+	3157	12	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10366	12286	intron_retention	FALSE	canonical	1	457962	junction_3	877338.9516982072	NA	2	1	TRUE	NA	NA	NA	B	coding	270	813	346	1158	35.0	5	True	ATTAAA	-32
PB.2637.43	chr12	+	3063	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10366	12087	intron_retention	FALSE	non_canonical	0	0	junction_7	1732964.7849154994	NA	0	NA	TRUE	NA	NA	NA	B	coding	305	918	346	1263	10.0	5	True	ATTAAA	-17
PB.2637.40	chr12	+	1702	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10364	12264	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	1557216.1201446608	NA	1	NA	TRUE	NA	NA	NA	B	coding	334	1005	348	1352	15.0	3	True	ATTAAA	-10
PB.2637.41	chr12	+	1673	11	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10364	12304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1147938.7243019724	NA	3	1	TRUE	NA	NA	NA	B	coding	311	936	348	1283	15.0	3	True	AATAGA	-18
PB.2637.46	chr12	+	1271	13	full-splice_match	PCBP2	ENST00000549863.5	1619	13	202	146	3	-1	multi-exon	FALSE	non_canonical	0	0	junction_7	1764503.584347702	NA	2	1	TRUE	NA	NA	NA	C	coding	321	966	125	1090	20.0	-8718	False	ATTAAA	-25
PB.9543.7	chr5	-	3830	32	full-splice_match	LARS	ENST00000394434.6	4766	32	-9	945	-9	-72	multi-exon	FALSE	canonical	1	407291	junction_27	224158.19093806596	NA	4	2	TRUE	NA	NA	NA	C	coding	1176	3531	177	3707	35.0	-20	True	AATAGA	-23
PB.2637.44	chr12	+	1972	15	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10368	12266	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	2075347.8877418775	NA	4	NA	TRUE	NA	NA	NA	B	coding	256	771	344	1114	20.0	7	True	ATTAAA	-12
PB.2637.45	chr12	+	1568	15	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10374	12286	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1733744.5678767925	NA	3	1	TRUE	NA	NA	NA	B	coding	335	1008	189	1196	35.0	-8931	False	ATTAAA	-32
PB.10207.14	chr6	-	2714	3	full-splice_match	PTPRK	ENST00000525459.1	1722	3	-4	-988	-4	988	multi-exon	FALSE	canonical	1	253195	junction_2	33159.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	234	980	30.0	-12	True	AATAAA	-9
PB.10207.12	chr6	-	5490	15	incomplete-splice_match	PTPRK	ENST00000368213.9	5816	31	-14	33350	2	-2340	3prime_fragment	FALSE	canonical	1	216478	junction_1	39045.574436307434	NA	1	NA	TRUE	NA	NA	NA	C	coding	861	2586	240	2825	25.0	-18	True	AATAAA	-19
PB.10207.13	chr6	-	3170	7	incomplete-splice_match	PTPRK	ENST00000524534.5	2441	14	-76	119221	-4	1775	3prime_fragment	FALSE	canonical	1	253195	junction_6	32463.21778952296	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	234	1409	25.0	-12	True	AGTAAA	-11
PB.10207.10	chr6	-	5417	30	full-splice_match	PTPRK	ENST00000368226.8	6087	30	77	593	2	-395	multi-exon	FALSE	canonical	1	207995	junction_12	50619.73718675477	NA	8	1	TRUE	NA	NA	NA	C	coding	1440	4323	240	4562	10.0	-18	True	ATTAAA	-14
PB.10207.11	chr6	-	4750	30	full-splice_match	PTPRK	ENST00000368226.8	6087	30	84	1253	-3	81	multi-exon	FALSE	canonical	1	207995	junction_12	50619.73718675477	NA	0	NA	TRUE	NA	NA	NA	C	coding	1440	4323	233	4555	40.0	-11	True	AATAAA	-27
PB.11459.2	chr9	-	2906	12	full-splice_match	NFIB	ENST00000397575.7	2869	12	-72	35	-72	-4	multi-exon	FALSE	canonical	1	31190	junction_3	72067.96260761937	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	634	2316	80.0	-3	True	NA	NA
PB.9287.18	chr5	+	3418	25	novel_not_in_catalog	TNPO1	novel	11183	25	NA	NA	-35	5	any annotated donor/acceptor	FALSE	canonical	1	4752	junction_24	174998.953542898	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	127	2799	35.0	-4	True	NA	NA
PB.4561.5	chr16	-	2278	15	novel_in_catalog	KARS	novel	2421	15	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	5681	junction_14	688826.9392047939	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	237	2114	30.0	-1	True	ATTAAA	-23
PB.3406.5	chr14	+	5070	20	incomplete-splice_match	FANCM	ENST00000267430.9	7111	23	-6	11886	1	1153	3prime_fragment	FALSE	canonical	1	28937	junction_3	9574.708450751777	NA	1	NA	TRUE	NA	NA	NA	C	coding	1659	4977	92	5068	65.0	1	True	AAGAAA	-26
PB.2796.1	chr12	+	2563	1	full-splice_match	ATP2B1-AS1	ENST00000605386.1	3632	1	147	922	147	-922	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-1036	False	AATAAA	-16
PB.4561.6	chr16	-	1851	14	full-splice_match	KARS	ENST00000302445.7	2005	14	11	143	-3	-21	multi-exon	FALSE	canonical	1	1094489	junction_13	465172.0765585812	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	30	1823	10.0	-4	True	NA	NA
PB.4561.1	chr16	-	1989	14	full-splice_match	KARS	ENST00000302445.7	2005	14	14	2	0	-2	multi-exon	FALSE	canonical	1	1094489	junction_13	465172.0765585812	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	27	1820	15.0	-1	True	ATTAAA	-28
PB.3406.1	chr14	+	2656	14	incomplete-splice_match	FANCM	ENST00000267430.9	7111	23	-13	25575	-6	7889	3prime_fragment	FALSE	canonical	1	28937	junction_3	7710.808113506236	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	99	2654	60.0	-6	True	ACTAAA	-12
PB.4561.3	chr16	-	2104	14	novel_in_catalog	KARS	novel	2421	15	NA	NA	-5	-6	no_combination_of_known_junctions	FALSE	canonical	1	14464	junction_13	629866.25189863	NA	12	1	TRUE	NA	NA	NA	C	coding	441	1326	614	1939	30.0	-6	True	ATTAAA	-24
PB.4561.2	chr16	-	2170	15	full-splice_match	KARS	ENST00000319410.9	2421	15	-3	254	-3	-4	multi-exon	FALSE	canonical	1	240790	junction_14	653976.0860200212	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	126	2003	20.0	-4	True	ATTAAA	-26
PB.9431.18	chr5	+	3504	5	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	20640	junction_1	289684.1219022023	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-45	True	AATAAA	-12
PB.9431.19	chr5	+	2029	6	full-splice_match	CDC42SE2	ENST00000360515.7	3591	6	-18	1580	-5	4	multi-exon	FALSE	canonical	1	185505	junction_5	220300.35219182016	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-45	True	ATTAAA	-18
PB.7042.27	chr2	-	2588	12	full-splice_match	WDFY1	ENST00000233055.8	4660	12	48	2024	-4	-2024	multi-exon	FALSE	canonical	1	288306	junction_11	42286.1560885333	NA	19	1	TRUE	NA	NA	NA	C	coding	410	1233	56	1288	65.0	-5	True	TTTAAA	-5
PB.7042.26	chr2	-	4971	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	23	-1726	intron_retention	FALSE	canonical	1	288306	junction_10	43682.67957028277	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	2813	3373	40.0	-14	True	ATTAAA	-18
PB.7042.25	chr2	-	2882	12	full-splice_match	WDFY1	ENST00000233055.8	4660	12	52	1726	0	-1726	multi-exon	FALSE	canonical	1	288306	junction_11	42286.1560885333	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	52	1284	40.0	-1	True	ATTAAA	-18
PB.7042.24	chr2	-	4164	12	full-splice_match	WDFY1	ENST00000233055.8	4660	12	53	443	1	-443	multi-exon	FALSE	canonical	1	288306	junction_11	42286.1560885333	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	51	1283	55.0	0	True	NA	NA
PB.10999.29	chr8	+	5042	26	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-5	3191	any annotated donor/acceptor	FALSE	canonical	1	45786	junction_25	153378.7815427623	NA	0	NA	TRUE	NA	NA	NA	C	coding	1421	4266	295	4560	25.0	-8	True	NA	NA
PB.10999.28	chr8	+	5206	27	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-5	3190	any annotated donor/acceptor	FALSE	canonical	1	45786	junction_26	155525.77980290528	NA	0	NA	TRUE	NA	NA	NA	C	coding	1476	4431	295	4725	25.0	-8	True	NA	NA
PB.3557.10	chr14	-	2139	17	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	-1	-5	combination_of_known_junctions	TRUE	canonical	1	37846	junction_11	100569.5866588621	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	648	1679	45.0	-21	True	AAGAAA	-12
PB.10999.25	chr8	+	6511	38	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	198012	junction_23	213090.32746997746	NA	1	NA	TRUE	NA	NA	NA	C	coding	1969	5910	295	6204	35.0	-8	True	AATAAA	-17
PB.6463.1	chr2	+	1274	3	full-splice_match	CHAC2	ENST00000295304.4	1321	3	-3	50	-3	-50	multi-exon	FALSE	canonical	1	118866	junction_2	2995.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	184	555	99	653	55.0	-176	False	AATAAA	-18
PB.10999.27	chr8	+	6190	38	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	15671	junction_4	232256.53780981599	NA	1	NA	TRUE	NA	NA	NA	C	coding	1936	5811	295	6105	50.0	-8	True	AATAAA	-15
PB.10999.26	chr8	+	6438	39	full-splice_match	PCM1	ENST00000519253.5	6443	39	-43	48	-5	-3	multi-exon	FALSE	canonical	1	192825	junction_24	220300.44369938236	NA	0	NA	TRUE	NA	NA	NA	C	coding	2016	6051	295	6345	30.0	-8	True	AATAAA	-23
PB.10999.21	chr8	+	3062	18	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-6	1074	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	145710.90802529882	NA	1	NA	TRUE	NA	NA	NA	C	coding	922	2766	296	3061	50.0	-9	True	NA	NA
PB.10999.20	chr8	+	6654	39	full-splice_match	PCM1	ENST00000519253.5	6443	39	-45	-166	-7	1	multi-exon	FALSE	canonical	1	192825	junction_24	220300.44369938236	NA	3	NA	TRUE	NA	NA	NA	C	coding	2016	6051	297	6347	35.0	-10	True	AATAAA	-17
PB.7042.29	chr2	-	2507	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	-10	-2024	no_combination_of_known_junctions	FALSE	canonical	1	2588	junction_1	118136.33518274552	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	84	1160	65.0	-9	False	TTTAAA	-5
PB.7042.28	chr2	-	2472	10	novel_in_catalog	WDFY1	novel	361	2	NA	NA	23	-1971	no_combination_of_known_junctions	FALSE	canonical	1	297	junction_9	124457.04770137853	NA	2	1	TRUE	NA	NA	NA	C	coding	307	924	196	1119	70.0	-14	True	TATAAA	-45
PB.9339.3	chr5	+	2984	7	novel_not_in_catalog	POLR3G	novel	339	2	NA	NA	8	-166	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	27813.73332696158	NA	2	1	TRUE	NA	NA	NA	C	coding	191	576	193	768	40.0	-85	False	ATTAAA	-8
PB.9339.2	chr5	+	3119	8	full-splice_match	POLR3G	ENST00000399107.5	3285	8	0	166	0	-166	multi-exon	FALSE	canonical	1	15930	junction_3	54086.13253592715	NA	1	1	TRUE	NA	NA	NA	C	coding	223	672	201	872	40.0	0	True	ATTAAA	-8
PB.9339.1	chr5	+	3273	8	full-splice_match	POLR3G	ENST00000503373.5	763	8	-253	-2257	-51	-166	multi-exon	FALSE	canonical	1	2690	junction_1	57287.75344999086	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	355	1026	40.0	-949	False	ATTAAA	-8
PB.8493.14	chr3	+	3098	16	novel_in_catalog	GFM1	novel	3721	18	NA	NA	-34	0	no_combination_of_known_junctions	FALSE	canonical	1	2041	junction_2	171954.390398798	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	302	1990	10.0	36	True	AATAAA	-19
PB.2265.8	chr11	-	4124	8	full-splice_match	KDELC2	ENST00000323468.9	4312	8	-2	190	-2	-183	multi-exon	FALSE	canonical	1	159583	junction_5	48230.941221398956	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	69	1592	70.0	155	False	NA	NA
PB.2265.9	chr11	-	3301	8	full-splice_match	KDELC2	ENST00000323468.9	4312	8	41	970	41	0	multi-exon	FALSE	canonical	1	159583	junction_5	48230.941221398956	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	26	1549	75.0	-8	True	NA	NA
PB.9339.5	chr5	+	2053	8	full-splice_match	POLR3G	ENST00000399107.5	3285	8	23	1209	-2	-1209	multi-exon	FALSE	canonical	1	15930	junction_3	54086.13253592715	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	178	849	5.0	-2	True	NA	NA
PB.9339.4	chr5	+	3263	8	full-splice_match	POLR3G	ENST00000399107.5	3285	8	21	1	-4	-1	multi-exon	FALSE	canonical	1	15930	junction_3	54086.13253592715	NA	1	1	TRUE	NA	NA	NA	C	coding	223	672	180	851	40.0	-4	True	AATAAA	-16
PB.2265.5	chr11	-	4696	8	novel_not_in_catalog	KDELC2	novel	4312	8	NA	NA	-40	-13	any annotated donor/acceptor	FALSE	canonical	1	4789	junction_7	90211.35396932911	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	513	1994	70.0	117	False	AATAAA	-12
PB.3108.1	chr13	+	2306	3	full-splice_match	RFXAP	ENST00000255476.2	2304	3	-3	1	-3	-1	multi-exon	FALSE	canonical	1	92292	junction_1	10583.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	138	956	20.0	-21	True	ATTAAA	-20
PB.2265.7	chr11	-	4073	7	novel_in_catalog	KDELC2	novel	4312	8	NA	NA	24	-13	combination_of_known_junctions	TRUE	canonical	1	10969	junction_2	93554.29133826816	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	43	1371	70.0	-25	True	AATAAA	-12
PB.415.4	chr1	+	2482	16	full-splice_match	SCP2	ENST00000371514.7	2811	16	41	288	-7	14	multi-exon	FALSE	canonical	1	256332	junction_1	484259.8808887641	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	128	1771	40.0	-16	True	AATAAA	-31
PB.2265.1	chr11	-	4175	8	full-splice_match	KDELC2	ENST00000323468.9	4312	8	117	20	117	-13	multi-exon	FALSE	canonical	1	159583	junction_5	48230.941221398956	NA	9	NA	TRUE	NA	NA	NA	C	coding	406	1221	253	1473	70.0	274	False	AATAAA	-12
PB.2265.2	chr11	-	3909	6	novel_in_catalog	KDELC2	novel	4312	8	NA	NA	-18	0	no_combination_of_known_junctions	FALSE	canonical	1	7610	junction_3	104303.64153106065	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	85	1194	35.0	139	False	AATAAA	-25
PB.2265.3	chr11	-	3698	5	novel_in_catalog	KDELC2	novel	4312	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	3544	junction_2	114919.3673092138	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	69	983	35.0	155	False	AATAAA	-25
PB.9337.19	chr5	-	3760	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-33	-12	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_9	166691.35258115022	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	204	1505	75.0	1020	False	CATAAA	-38
PB.9337.18	chr5	-	3828	11	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	9	-12	combination_of_known_junctions	FALSE	canonical	1	11542	junction_10	161443.13658883117	NA	3	1	TRUE	NA	NA	NA	C	coding	433	1302	272	1573	75.0	-1	True	CATAAA	-38
PB.3504.2	chr14	-	3278	4	full-splice_match	MAX	ENST00000284165.10	3155	4	-47	-76	9	1	multi-exon	FALSE	canonical	1	388320	junction_3	319204.34707879525	NA	3	NA	TRUE	NA	NA	NA	C	coding	134	405	197	601	5.0	3	True	AATAAA	-18
PB.9337.14	chr5	-	3989	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-18	-12	combination_of_known_junctions	FALSE	canonical	1	4186	junction_9	169321.57417598058	NA	3	NA	TRUE	NA	NA	NA	C	coding	465	1398	337	1734	75.0	6282	False	CATAAA	-38
PB.9337.17	chr5	-	3831	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-14	-12	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_9	207060.72128296623	NA	4	NA	TRUE	NA	NA	NA	C	coding	463	1392	185	1576	75.0	-11	True	CATAAA	-38
PB.9337.16	chr5	-	3846	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-20	-12	combination_of_known_junctions	FALSE	canonical	1	5678	junction_9	168960.2751010492	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	194	1591	75.0	1033	False	CATAAA	-38
PB.3504.1	chr14	-	1923	4	full-splice_match	MAX	ENST00000358402.8	1973	4	-24	74	-9	4	multi-exon	FALSE	canonical	1	395707	junction_3	306750.60113424755	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	190	645	30.0	10	True	AATAAA	-22
PB.9337.13	chr5	-	4021	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-1	-12	combination_of_known_junctions	FALSE	canonical	1	222033	junction_1	120393.75475866217	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	369	1766	75.0	0	True	CATAAA	-38
PB.9337.12	chr5	-	4108	11	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-41	-12	combination_of_known_junctions	FALSE	canonical	1	4260	junction_10	189604.74442154658	NA	6	NA	TRUE	NA	NA	NA	C	coding	433	1302	552	1853	75.0	9	True	CATAAA	-38
PB.5470.19	chr18	-	2656	11	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	-23	730	combination_of_known_junctions	FALSE	canonical	1	58548	junction_10	216473.69023206955	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	219	1604	30.0	-7	True	AATATA	-23
PB.5470.18	chr18	-	3146	12	novel_not_in_catalog	SMAD2	novel	34526	11	NA	NA	-25	1147	any annotated donor/acceptor	FALSE	canonical	1	2849	junction_8	297261.7708421289	NA	7	1	TRUE	NA	NA	NA	C	coding	412	1239	439	1677	30.0	-9	True	AGTAAA	-21
PB.7342.16	chr20	-	4065	12	novel_in_catalog	STAU1	novel	3684	14	NA	NA	32	-2	intron_retention	FALSE	canonical	1	333209	junction_2	219201.00324851848	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	334	1812	25.0	-2	True	AATAAA	-12
PB.9113.3	chr5	+	2699	15	full-splice_match	SDHA	ENST00000264932.10	2390	15	72	-381	2	381	multi-exon	FALSE	canonical	1	774902	junction_2	333097.44748809875	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	44	2038	15.0	-11	True	NA	NA
PB.240.18	chr1	-	3286	18	novel_in_catalog	PUM1	novel	4631	18	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	1	8262	junction_15	175219.89082699947	NA	2	NA	TRUE	NA	NA	NA	C	coding	947	2844	92	2935	75.0	21	True	NA	NA
PB.240.19	chr1	-	3227	18	novel_in_catalog	PUM1	novel	4631	18	NA	NA	9	-10	combination_of_known_junctions	FALSE	canonical	1	8262	junction_15	185206.65492777608	NA	1	1	TRUE	NA	NA	NA	C	coding	920	2763	114	2876	75.0	-1	True	NA	NA
PB.5470.11	chr18	-	2309	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	22	-25	combination_of_known_junctions	FALSE	canonical	1	19524	junction_11	258341.11722096274	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	329	1732	45.0	1009	False	AATAAA	-11
PB.3504.7	chr14	-	2748	4	full-splice_match	MAX	ENST00000555667.5	574	4	0	-2174	0	0	multi-exon	FALSE	canonical	1	80994	junction_1	427479.42656642036	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-1	True	AATAAA	-17
PB.5470.13	chr18	-	2006	11	full-splice_match	SMAD2	ENST00000402690.6	12075	11	240	9829	-46	-155	multi-exon	FALSE	canonical	1	76274	junction_10	198369.8849760215	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	156	1559	10.0	-30	True	TATAAA	-27
PB.6173.3	chr19	-	2568	6	novel_not_in_catalog	ZNF350	novel	2338	5	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	1	2336	junction_1	48198.21884924795	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	1141	2061	30.0	-1	True	ATTAAA	-11
PB.4952.3	chr17	+	4734	28	novel_in_catalog	ERBB2	novel	4792	31	NA	NA	22	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	230843.7633655281	NA	0	NA	TRUE	NA	NA	NA	C	coding	1294	3885	242	4126	35.0	-9623	False	AATATA	-7
PB.4952.2	chr17	+	4639	27	full-splice_match	ERBB2	ENST00000269571.9	4545	27	-104	10	0	-10	multi-exon	FALSE	canonical	1	202497	junction_1	155375.11532255902	NA	0	NA	TRUE	NA	NA	NA	C	coding	1255	3768	264	4031	35.0	0	True	AATATA	-7
PB.4952.1	chr17	+	4713	27	full-splice_match	ERBB2	ENST00000578373.5	4523	27	-115	-75	-11	-10	multi-exon	TRUE	canonical	1	21325	junction_2	196184.0329675386	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3177	929	4105	35.0	-11	True	AATATA	-7
PB.3504.6	chr14	-	2781	5	novel_not_in_catalog	MAX	novel	330	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	199016.73285351536	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	179	496	0.0	-1	True	AATAAA	-17
PB.8968.1	chr4	+	3533	1	novel_in_catalog	FGF2	novel	6775	3	NA	NA	453	-61580	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-4	True	NA	NA
PB.11557.1	chr9	-	2348	2	full-splice_match	GLIDR	ENST00000625350.1	2588	2	220	20	170	0	multi-exon	FALSE	canonical	1	49649	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	98	297	2	298	100.0	218	False	NA	NA
PB.9422.1	chr5	-	1827	5	full-splice_match	MARCH3	ENST00000308660.5	4196	5	216	2153	216	324	multi-exon	FALSE	canonical	1	89572	junction_3	6696.93416796074	NA	0	NA	TRUE	NA	NA	NA	A	coding	253	762	300	1061	50.0	-1	True	AATAAA	-14
PB.91.4	chr1	+	2661	3	novel_not_in_catalog	UBIAD1	novel	3646	2	NA	NA	-18	-506	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	133427.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	445	864	90.0	13	True	NA	NA
PB.91.3	chr1	+	3395	2	full-splice_match	UBIAD1	ENST00000376810.5	3646	2	250	1	-72	-1	multi-exon	FALSE	canonical	1	266854	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	77	1093	15.0	-41	False	ATTAAA	-22
PB.91.2	chr1	+	2983	2	full-splice_match	UBIAD1	ENST00000376810.5	3646	2	-6	669	-6	-669	multi-exon	FALSE	canonical	1	266854	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	333	1349	65.0	-8	True	NA	NA
PB.91.1	chr1	+	2849	2	full-splice_match	UBIAD1	ENST00000376810.5	3646	2	291	506	-31	-506	multi-exon	FALSE	canonical	1	266854	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	36	1052	90.0	0	True	NA	NA
PB.9543.3	chr5	-	4690	32	novel_in_catalog	LARS	novel	4766	32	NA	NA	1	-1	intron_retention	FALSE	canonical	1	26414	junction_16	266609.8729843564	NA	2	NA	TRUE	NA	NA	NA	C	coding	1163	3492	132	3623	25.0	25	True	NA	NA
PB.6940.4	chr2	-	3113	18	full-splice_match	ORC2	ENST00000234296.6	4312	18	2	1197	2	284	multi-exon	FALSE	canonical	1	153047	junction_7	39296.53346298643	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	249	1982	20.0	-19	True	AATAAA	-17
PB.3504.9	chr14	-	2138	6	full-splice_match	MAX	ENST00000394606.6	2097	6	-41	0	-16	0	multi-exon	FALSE	canonical	1	52891	junction_1	379521.0674840595	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	222	533	0.0	-22	False	AATAAA	-17
PB.3213.4	chr13	-	2035	2	novel_not_in_catalog	SPRY2	novel	2708	2	NA	NA	563	-4	any annotated donor/acceptor	FALSE	canonical	1	9410	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	315	948	310	1257	20.0	2866	False	TATAAA	-27
PB.11672.3	chr9	+	2841	10	full-splice_match	TMOD1	ENST00000259365.8	3343	10	8	494	8	0	multi-exon	FALSE	canonical	1	113506	junction_1	61652.77955345295	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	206	1285	5.0	-19	True	ATTAAA	-17
PB.3213.1	chr13	-	1797	1	novel_in_catalog	SPRY2	novel	2708	2	NA	NA	1883	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	315	948	72	1019	20.0	4186	False	TATAAA	-27
PB.4556.9	chr16	-	2391	3	full-splice_match	TMEM170A	ENST00000561878.1	1072	3	-14	-1305	-14	0	multi-exon	FALSE	canonical	1	133300	junction_1	8789.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	113	547	95.0	-44	True	NA	NA
PB.4556.8	chr16	-	2988	4	novel_not_in_catalog	AC009163.4	novel	530	4	NA	NA	17	-30559	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	62674.938553353735	NA	2	NA	TRUE	NA	NA	NA	B	coding	121	366	90	455	55.0	-21	True	NA	NA
PB.4556.7	chr16	-	3876	4	novel_not_in_catalog	AC009163.4	novel	530	4	NA	NA	144	-30542	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41224.58967116053	NA	1	NA	TRUE	NA	NA	NA	B	coding	83	252	159	410	35.0	260	False	AATAAA	-12
PB.4556.6	chr16	-	4444	4	novel_not_in_catalog	AC009163.4	novel	530	4	NA	NA	23	-30542	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67364.71790682914	NA	3	NA	TRUE	NA	NA	NA	B	coding	144	435	84	518	35.0	-15	True	AATAAA	-12
PB.4556.5	chr16	-	4712	3	novel_in_catalog	AC009163.4	novel	530	4	NA	NA	154	-30542	intron_retention	FALSE	canonical	1	37891	junction_2	31057.5	NA	7	NA	TRUE	NA	NA	NA	B	coding	83	252	149	400	35.0	-12	True	AATAAA	-12
PB.4556.4	chr16	-	4836	3	full-splice_match	TMEM170A	ENST00000561878.1	1072	3	9	-3773	0	2	multi-exon	FALSE	canonical	1	133300	junction_1	8789.0	NA	10	NA	TRUE	NA	NA	NA	C	coding	144	435	90	524	35.0	-21	True	AATAAA	-12
PB.4556.3	chr16	-	3957	4	novel_not_in_catalog	AC009163.4	novel	530	4	NA	NA	133	-30541	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56082.77133150806	NA	4	NA	TRUE	NA	NA	NA	B	coding	106	321	170	490	30.0	11	True	AATAAA	-13
PB.4556.2	chr16	-	4407	4	novel_not_in_catalog	AC009163.4	novel	530	4	NA	NA	-3	-30536	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62674.938553353735	NA	3	NA	TRUE	NA	NA	NA	B	coding	121	366	110	475	25.0	-41	True	AATAAA	-18
PB.4556.1	chr16	-	3995	4	novel_not_in_catalog	AC009163.4	novel	530	4	NA	NA	19	-30535	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67364.71790682914	NA	3	NA	TRUE	NA	NA	NA	B	coding	144	435	88	522	25.0	-19	True	AATAAA	-19
PB.9325.3	chr5	+	2850	2	novel_not_in_catalog	ZCCHC9	novel	768	5	NA	NA	-5	-3563	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	149	450	2082	2531	90.0	0	True	NA	NA
PB.8253.1	chr3	+	4237	1	genic	AC117473.1	novel	NA	NA	NA	NA	-8	-220019	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	152	459	1062	1520	90.0	-11	True	NA	NA
PB.8956.4	chr4	-	2950	1	novel_in_catalog	C4orf3	novel	2960	3	NA	NA	336	1063	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	31	True	NA	NA
PB.8956.3	chr4	-	1368	2	full-splice_match	C4orf3	ENST00000504110.1	667	2	362	-1063	362	1063	multi-exon	FALSE	canonical	1	2087464	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	57	True	NA	NA
PB.8956.2	chr4	-	1959	2	full-splice_match	C4orf3	ENST00000504110.1	667	2	353	-1645	353	-635	multi-exon	FALSE	canonical	1	2087464	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	48	True	NA	NA
PB.8956.1	chr4	-	4446	1	genic	C4orf3	novel	NA	NA	NA	NA	294	237	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-11	True	GATAAA	-36
PB.6940.5	chr2	-	3145	18	novel_not_in_catalog	ORC2	novel	4312	18	NA	NA	11	282	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	63298.474516513015	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	502	2016	20.0	-10	True	AATAAA	-15
PB.11672.6	chr9	+	2211	3	novel_not_in_catalog	TMOD1	novel	3259	10	NA	NA	19606	-1	any annotated donor/acceptor	FALSE	canonical	1	12953	junction_1	131351.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	1	True	ATTAAA	-16
PB.10390.15	chr7	-	2708	14	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	-2	504	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	484685.6921122017	NA	25	1	TRUE	NA	NA	NA	C	coding	252	759	1129	1887	70.0	8	True	NA	NA
PB.10390.14	chr7	-	2725	15	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	1	504	any annotated donor/acceptor	FALSE	canonical	1	5156	junction_14	444615.6723167017	NA	10	1	TRUE	NA	NA	NA	C	coding	607	1824	81	1904	70.0	11	True	NA	NA
PB.10390.17	chr7	-	2608	13	novel_in_catalog	EIF2AK1	novel	4469	15	NA	NA	0	504	no_combination_of_known_junctions	FALSE	canonical	1	2975	junction_2	393962.40875715925	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	93	1787	70.0	-1	True	NA	NA
PB.10390.16	chr7	-	2644	14	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	0	504	any annotated donor/acceptor	FALSE	canonical	1	2402	junction_13	506769.25875811424	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	93	1823	70.0	-1	True	NA	NA
PB.10390.11	chr7	-	3138	16	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	-3	504	any annotated donor/acceptor	FALSE	canonical	1	4108	junction_7	536490.1210462769	NA	3	1	TRUE	NA	NA	NA	C	coding	166	501	935	1435	70.0	-4	True	NA	NA
PB.10390.13	chr7	-	2918	16	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	-15	504	any annotated donor/acceptor	FALSE	canonical	1	506	junction_11	469618.42970678513	NA	2	NA	TRUE	NA	NA	NA	C	coding	422	1269	829	2097	70.0	-16	False	NA	NA
PB.10390.12	chr7	-	3067	15	novel_in_catalog	EIF2AK1	novel	4469	15	NA	NA	9	504	combination_of_known_junctions	FALSE	canonical	1	12526	junction_10	420037.7863384703	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	978	2246	70.0	-47	False	NA	NA
PB.39.2	chr1	+	2700	7	full-splice_match	PRXL2B	ENST00000378427.6	2689	7	-6	-5	-4	0	multi-exon	FALSE	canonical	1	105445	junction_5	65528.0006969031	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	5	646	0.0	-6	True	NA	NA
PB.6445.27	chr2	-	3722	14	full-splice_match	PREPL	ENST00000541738.5	6049	14	286	2041	-15	614	multi-exon	FALSE	canonical	1	57369	junction_13	174037.1216592707	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	102	2018	45.0	-1	True	AATAAA	-16
PB.10390.18	chr7	-	2213	15	full-splice_match	EIF2AK1	ENST00000199389.10	4469	15	67	2189	1	-77	multi-exon	FALSE	canonical	1	395395	junction_10	367399.6917434869	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	81	1973	25.0	11	True	ACTAAA	-19
PB.8580.6	chr3	-	2273	10	full-splice_match	TRA2B	ENST00000456380.5	1697	10	0	-576	0	-5	multi-exon	FALSE	canonical	1	267715	junction_8	933996.4064105796	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	746	1312	50.0	-16	True	AATAAA	-9
PB.949.1	chr1	+	1646	6	full-splice_match	CACYBP	ENST00000613570.4	2835	6	274	915	2	721	multi-exon	FALSE	canonical	1	783	junction_2	81834.09278143187	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	368	925	35.0	2	True	AATAAA	-19
PB.85.4	chr1	-	3000	5	full-splice_match	DFFA	ENST00000377036.2	1403	5	-56	-1541	-18	716	multi-exon	FALSE	canonical	1	480567	junction_4	68453.30937717693	NA	3	NA	TRUE	NA	NA	NA	C	coding	268	807	87	893	95.0	-1	True	NA	NA
PB.85.5	chr1	-	1486	6	full-splice_match	DFFA	ENST00000377038.7	6032	6	-18	4564	-18	557	multi-exon	FALSE	canonical	1	353428	junction_1	104261.2448891725	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	87	1082	55.0	-1	True	NA	NA
PB.4519.10	chr16	+	1122	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	70	3094	-13	252	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	20	472	25.0	2	True	ATTAAA	-13
PB.85.7	chr1	-	1512	5	full-splice_match	DFFA	ENST00000377036.2	1403	5	-94	-15	-56	15	multi-exon	FALSE	canonical	1	480567	junction_4	68453.30937717693	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	125	931	35.0	-7	True	AGTAAA	-30
PB.6940.6	chr2	-	2785	18	full-splice_match	ORC2	ENST00000234296.6	4312	18	20	1507	20	-26	multi-exon	FALSE	canonical	1	153047	junction_7	39296.53346298643	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	231	1964	20.0	-1	True	AATAAA	-20
PB.85.2	chr1	-	2003	6	full-splice_match	DFFA	ENST00000377038.7	6032	6	3	4026	3	1095	multi-exon	FALSE	canonical	1	353428	junction_1	104261.2448891725	NA	9	NA	TRUE	NA	NA	NA	C	coding	331	996	66	1061	90.0	2	True	NA	NA
PB.85.3	chr1	-	1728	6	full-splice_match	DFFA	ENST00000377038.7	6032	6	-19	4323	-19	798	multi-exon	FALSE	canonical	1	353428	junction_1	104261.2448891725	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	88	1083	70.0	-2	True	NA	NA
PB.11803.3	chr9	+	3619	19	full-splice_match	STXBP1	ENST00000373299.4	3765	19	-18	164	0	-128	multi-exon	FALSE	canonical	1	407873	junction_1	104746.88917801913	NA	9	NA	TRUE	NA	NA	NA	C	coding	594	1785	140	1924	35.0	-12	True	TATAAA	-25
PB.6392.6	chr2	+	3889	16	full-splice_match	CLIP4	ENST00000320081.9	4293	16	79	325	79	-325	multi-exon	FALSE	canonical	1	58150	junction_1	57176.06582105254	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	177	2294	40.0	22	True	AGTAAA	-16
PB.11803.2	chr9	+	1929	19	full-splice_match	STXBP1	ENST00000373299.4	3765	19	-53	1889	8	-59	multi-exon	FALSE	canonical	1	407873	junction_1	104746.88917801913	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1755	175	1929	65.0	0	True	AAGAAA	-4
PB.11129.8	chr8	-	1837	14	novel_in_catalog	ATP6V1H	novel	2365	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2438	junction_13	165280.85753528035	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	104	1546	25.0	230	False	AATAAA	-27
PB.11129.9	chr8	-	3424	10	incomplete-splice_match	ATP6V1H	ENST00000359530.6	2007	14	-11	54216	-11	-235	3prime_fragment	FALSE	canonical	1	368782	junction_4	81246.72148188845	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	285	1376	20.0	-29	True	AATAAA	-38
PB.279.13	chr1	-	4011	21	full-splice_match	KIAA0319L	ENST00000325722.7	4789	21	-1	779	-1	-164	multi-exon	FALSE	canonical	1	122800	junction_20	80586.38742467614	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	237	3386	85.0	246	False	NA	NA
PB.11129.5	chr8	-	1999	13	full-splice_match	ATP6V1H	ENST00000355221.7	2365	13	250	116	-15	0	multi-exon	FALSE	canonical	1	128747	junction_7	142968.55004063735	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	320	1708	25.0	-64	True	AATAAA	-27
PB.11129.6	chr8	-	1885	13	novel_in_catalog	ATP6V1H	novel	2365	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	3516	junction_2	151601.42643355142	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	254	1594	25.0	2	True	AATAAA	-27
PB.11129.7	chr8	-	1870	13	novel_in_catalog	ATP6V1H	novel	2365	13	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	6719	junction_4	171135.8694045587	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	316	1185	25.0	-60	True	AATAAA	-27
PB.11129.1	chr8	-	2166	14	full-splice_match	ATP6V1H	ENST00000359530.6	2007	14	-31	-128	0	12	multi-exon	FALSE	canonical	1	368782	junction_8	98697.64238277	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	305	1747	25.0	-49	True	AATAAA	-25
PB.11129.2	chr8	-	2015	14	full-splice_match	ATP6V1H	ENST00000359530.6	2007	14	-8	0	-8	0	multi-exon	FALSE	canonical	1	368782	junction_8	98697.64238277	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	282	1724	25.0	-26	True	AATAAA	-27
PB.11129.3	chr8	-	1922	14	full-splice_match	ATP6V1H	ENST00000396774.6	1892	14	29	-59	4	1	multi-exon	FALSE	canonical	1	28112	junction_13	159596.1566358875	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	188	1630	20.0	231	False	AATAAA	-28
PB.1022.19	chr1	+	4167	31	novel_in_catalog	PTPRC	novel	731	7	NA	NA	9	-640	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	349674.0612626183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	127	3705	35.0	-40	True	AATAAA	-17
PB.6940.7	chr2	-	2709	18	novel_not_in_catalog	ORC2	novel	4312	18	NA	NA	30	-26	any annotated donor/acceptor	FALSE	canonical	1	4926	junction_4	61956.34457425212	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	221	1888	20.0	9	True	AATAAA	-20
PB.5894.3	chr19	-	2777	2	full-splice_match	UQCRFS1	ENST00000304863.5	3475	2	368	330	368	-330	multi-exon	FALSE	canonical	1	72998	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	56	880	40.0	-23	True	AATAAA	-21
PB.5894.2	chr19	-	3129	2	full-splice_match	UQCRFS1	ENST00000304863.5	3475	2	352	-6	352	6	multi-exon	FALSE	canonical	1	72998	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	274	825	72	896	20.0	11	False	NA	NA
PB.5894.1	chr19	-	4777	2	full-splice_match	UQCRFS1	ENST00000304863.5	3475	2	370	-1672	370	1672	multi-exon	FALSE	canonical	1	72998	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	274	825	54	878	90.0	-21	True	NA	NA
PB.5894.7	chr19	-	2779	1	novel_in_catalog	UQCRFS1	novel	3475	2	NA	NA	389	-5053	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	162	489	2076	2564	55.0	-2	True	NA	NA
PB.5894.6	chr19	-	959	3	novel_not_in_catalog	UQCRFS1	novel	3475	2	NA	NA	390	-2069	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	36499.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	34	801	30.0	-1	True	AATAAA	-16
PB.5894.5	chr19	-	1028	2	full-splice_match	UQCRFS1	ENST00000304863.5	3475	2	378	2069	378	-2069	multi-exon	FALSE	canonical	1	72998	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	46	870	30.0	-13	True	AATAAA	-16
PB.5894.4	chr19	-	1054	2	full-splice_match	UQCRFS1	ENST00000304863.5	3475	2	394	2027	394	-2027	multi-exon	FALSE	canonical	1	72998	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	30	854	25.0	3	True	AATAAA	-16
PB.6687.2	chr2	-	4994	25	full-splice_match	BUB1	ENST00000302759.10	3507	25	16	-1503	9	1367	multi-exon	FALSE	canonical	1	297598	junction_23	76299.71470908329	NA	1	NA	TRUE	NA	NA	NA	C	coding	1085	3258	104	3361	35.0	-36	False	NA	NA
PB.279.14	chr1	-	3902	21	full-splice_match	KIAA0319L	ENST00000426982.6	3213	21	7	-696	7	-164	multi-exon	FALSE	canonical	1	11561	junction_20	98040.6861737896	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	128	3277	85.0	12	False	NA	NA
PB.10617.1	chr7	-	1980	1	antisense	novelGene_NSUN5P1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	107	324	726	1049	100.0	NA	False	NA	NA
PB.7040.4	chr2	-	2288	5	full-splice_match	AP1S3	ENST00000396654.6	830	5	16	-1474	4	-18	multi-exon	FALSE	canonical	1	62641	junction_4	19725.100410073963	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	117	581	90.0	15	True	NA	NA
PB.11491.1	chr9	-	5720	4	full-splice_match	MOB3B	ENST00000262244.5	6454	4	-46	780	-46	-780	multi-exon	FALSE	canonical	1	43990	junction_3	17450.68258454857	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	472	1122	95.0	-18	True	NA	NA
PB.11491.2	chr9	-	2614	4	full-splice_match	MOB3B	ENST00000262244.5	6454	4	-83	3923	-83	-3923	multi-exon	FALSE	canonical	1	43990	junction_3	17450.68258454857	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	509	1159	20.0	-55	False	ATTAAA	-15
PB.10023.1	chr6	+	4894	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	391	127	391	-127	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	3	NA	TRUE	NA	NA	NA	C	coding	639	1920	66	1985	15.0	-32	True	ATTAAA	-14
PB.10023.2	chr6	+	2876	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	367	2169	367	-2169	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	1	NA	TRUE	NA	NA	NA	C	coding	639	1920	90	2009	10.0	-56	True	TATAAA	-14
PB.10023.3	chr6	+	4769	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	397	246	397	-246	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	3	NA	TRUE	NA	NA	NA	C	coding	639	1920	60	1979	60.0	-26	True	NA	NA
PB.10023.4	chr6	+	5062	17	novel_in_catalog	CD2AP	novel	5412	18	NA	NA	-52	-338	no_combination_of_known_junctions	FALSE	canonical	1	4372	junction_16	99896.69878896697	NA	3	NA	TRUE	NA	NA	NA	C	coding	607	1824	509	2332	20.0	-52	True	AATAAA	-18
PB.10023.5	chr6	+	2058	15	incomplete-splice_match	CD2AP	ENST00000359314.5	5412	18	-37	19302	-37	-1552	3prime_fragment	FALSE	canonical	1	199298	junction_1	56373.36492583376	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1563	494	2056	55.0	-37	True	NA	NA
PB.10023.6	chr6	+	5045	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	-3	370	-3	-370	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	2	NA	TRUE	NA	NA	NA	C	coding	639	1920	460	2379	45.0	-3	True	AATAAA	-17
PB.10023.7	chr6	+	5053	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	358	1	358	-1	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	21	1	TRUE	NA	NA	NA	C	coding	639	1920	99	2018	25.0	-65	True	AATAAA	-23
PB.10023.8	chr6	+	3927	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	5	1480	5	-1480	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	2	NA	TRUE	NA	NA	NA	C	coding	639	1920	452	2371	50.0	5	True	AATAAA	-32
PB.10023.9	chr6	+	4500	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	75	837	75	-837	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	8	NA	TRUE	NA	NA	NA	C	coding	639	1920	382	2301	35.0	-348	False	ACTAAA	-30
PB.6392.4	chr2	+	2259	14	incomplete-splice_match	CLIP4	ENST00000320081.9	4293	16	57	15935	57	2	3prime_fragment	FALSE	canonical	1	58150	junction_1	56835.991411705654	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	199	1977	5.0	0	True	NA	NA
PB.6802.16	chr2	-	6517	34	novel_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-13	-31514	no_combination_of_known_junctions	FALSE	canonical	1	717	junction_33	41273.539153430625	NA	1	NA	TRUE	NA	NA	NA	B	coding	1598	4797	42	4838	45.0	32	True	AATAAA	-20
PB.6802.14	chr2	-	6751	34	novel_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-46	-31514	no_combination_of_known_junctions	FALSE	canonical	1	957	junction_32	43018.04661575703	NA	1	NA	TRUE	NA	NA	NA	B	coding	1665	4998	75	5072	45.0	-1	True	AATAAA	-20
PB.10162.1	chr6	+	1955	2	antisense	novelGene_REV3L_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	TTTAAA	-14
PB.6777.1	chr2	-	2672	6	full-splice_match	RND3	ENST00000263895.8	2711	6	27	12	0	2	multi-exon	FALSE	canonical	1	421829	junction_5	228328.12368028605	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	158	892	20.0	-3	True	AATAAA	-13
PB.6777.2	chr2	-	2746	7	novel_in_catalog	RND3	novel	2777	5	NA	NA	-65	-3	combination_of_known_junctions	FALSE	canonical	1	698	junction_6	435131.3291084275	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	223	957	25.0	2633	False	AATAAA	-22
PB.3504.17	chr14	-	1615	5	full-splice_match	MAX	ENST00000358664.8	1546	5	-68	-1	6	1	multi-exon	FALSE	canonical	1	388320	junction_4	308089.80233154015	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	200	682	5.0	0	True	CATAAA	-19
PB.4086.16	chr15	-	2427	13	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-17	5	no_combination_of_known_junctions	FALSE	canonical	1	19386	junction_1	283084.43327628274	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	226	1893	40.0	31	False	NA	NA
PB.474.22	chr1	-	2501	9	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-41	0	intron_retention	FALSE	canonical	1	308497	junction_1	307863.4329974646	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	58	744	65.0	-18	False	NA	NA
PB.474.23	chr1	-	2149	10	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	549047	junction_1	250313.49790883838	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	40	984	50.0	0	True	ATTAAA	-11
PB.474.20	chr1	-	1841	11	full-splice_match	ZRANB2	ENST00000254821.10	2821	11	-25	1005	-25	701	multi-exon	FALSE	canonical	1	320958	junction_2	302756.1801249315	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	42	1004	30.0	-2	True	GATAAA	-20
PB.474.21	chr1	-	2560	10	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-25	0	intron_retention	FALSE	canonical	1	320958	junction_2	313367.8863187428	NA	2	1	TRUE	NA	NA	NA	C	coding	228	687	42	728	65.0	-2	True	NA	NA
PB.474.26	chr1	-	2832	8	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-23	-657	intron_retention	FALSE	canonical	1	629165	junction_2	204752.96692824346	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	40	726	15.0	0	True	AATAAA	-19
PB.474.27	chr1	-	3655	7	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-23	-2175	intron_retention	FALSE	canonical	1	629165	junction_1	212790.71511261692	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	40	726	90.0	0	True	NA	NA
PB.474.24	chr1	-	1089	11	full-splice_match	ZRANB2	ENST00000254821.10	2821	11	-18	1750	-18	0	multi-exon	FALSE	canonical	1	320958	junction_2	302756.1801249315	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	35	997	65.0	5	True	NA	NA
PB.474.25	chr1	-	3581	9	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-23	0	intron_retention	FALSE	canonical	1	549047	junction_1	250516.3040891438	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	40	726	65.0	0	True	NA	NA
PB.11377.3	chr8	-	2426	9	novel_in_catalog	NAPRT	novel	454	2	NA	NA	-4	0	intron_retention	FALSE	canonical	1	312934	junction_1	104003.26218681797	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	1973	2374	5.0	-18	True	GGGGCT	-37
PB.6392.3	chr2	+	2108	15	incomplete-splice_match	CLIP4	ENST00000320081.9	4293	16	209	9102	209	-1	3prime_fragment	FALSE	canonical	1	58150	junction_1	56996.931904180565	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	47	1846	25.0	-1	True	AATAAA	-14
PB.474.28	chr1	-	2737	7	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-23	-3093	intron_retention	FALSE	canonical	1	629165	junction_1	212790.71511261692	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	40	726	85.0	0	True	NA	NA
PB.11377.7	chr8	-	1644	13	full-splice_match	NAPRT	ENST00000426292.7	1654	13	10	0	6	0	multi-exon	FALSE	canonical	1	12278	junction_2	170781.70136878444	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	16	1593	5.0	-4	True	GGGGCT	-36
PB.11377.6	chr8	-	1687	13	full-splice_match	NAPRT	ENST00000449291.6	1965	13	277	1	3	0	multi-exon	FALSE	canonical	1	312934	junction_1	115603.27040921271	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	19	1635	5.0	-7	True	GGGGCT	-37
PB.11377.5	chr8	-	2256	10	novel_in_catalog	NAPRT	novel	454	2	NA	NA	7	0	intron_retention	FALSE	canonical	1	327866	junction_9	106222.10344786479	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	15	1259	5.0	-3	True	GGGGCT	-37
PB.11377.4	chr8	-	2334	10	novel_in_catalog	NAPRT	novel	454	2	NA	NA	-3	0	intron_retention	FALSE	canonical	1	312934	junction_1	108948.28978901236	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	679	1422	5.0	-17	True	GGGGCT	-37
PB.10497.1	chr7	-	6074	1	antisense	novelGene_RALA_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	1159	False	NA	NA
PB.3504.16	chr14	-	1571	4	full-splice_match	MAX	ENST00000358402.8	1973	4	-13	415	0	5	multi-exon	FALSE	canonical	1	395707	junction_3	306750.60113424755	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	179	634	15.0	-1	True	CATAAA	-23
PB.5917.1	chr19	+	3342	4	full-splice_match	ZNF181	ENST00000459757.6	2265	4	-396	-681	-15	-5	multi-exon	FALSE	canonical	1	57080	junction_2	10383.380609844218	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	860	2572	30.0	-15	True	AATAAA	-35
PB.5917.2	chr19	+	2709	5	novel_in_catalog	ZNF181	novel	499	4	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	1	33803	junction_1	18644.104716706028	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	225	1937	30.0	11	True	AATAAA	-37
PB.9337.5	chr5	-	5845	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	5678	junction_9	206325.975333592	NA	7	NA	TRUE	NA	NA	NA	C	coding	431	1296	188	1483	15.0	-11	True	AGTAAA	-20
PB.9337.4	chr5	-	5950	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	5678	junction_9	168960.2751010492	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	191	1588	15.0	-14	True	AGTAAA	-20
PB.1751.3	chr11	-	2956	11	novel_in_catalog	SLC25A22	novel	2796	10	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	428	junction_10	133460.14487718797	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	547	1518	5.0	-8	True	AATAAA	-16
PB.1751.2	chr11	-	2624	10	full-splice_match	SLC25A22	ENST00000628067.2	2692	10	67	1	1	-1	multi-exon	FALSE	canonical	1	28120	junction_9	108630.87842691169	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	214	1185	5.0	0	True	AATAAA	-17
PB.1751.5	chr11	-	2610	10	novel_in_catalog	SLC25A22	novel	2796	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	5108	junction_6	133405.98144326027	NA	3	NA	TRUE	NA	NA	NA	C	coding	319	960	214	1173	10.0	0	True	AATAAA	-15
PB.4634.1	chr16	-	2068	4	full-splice_match	DBNDD1	ENST00000002501.10	2079	4	3	8	3	0	multi-exon	FALSE	canonical	1	77483	junction_3	64185.72148763998	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	130	606	20.0	-15	True	ATTAAA	-18
PB.6324.5	chr2	-	7145	51	novel_in_catalog	NBAS	novel	7281	52	NA	NA	-4	-3	no_combination_of_known_junctions	FALSE	canonical	1	15432	junction_40	53371.28292518365	NA	0	NA	TRUE	NA	NA	NA	C	coding	2328	6987	31	7017	25.0	-1	True	AATAAA	-12
PB.4634.3	chr16	-	2044	4	full-splice_match	DBNDD1	ENST00000568838.1	993	4	264	-1315	16	-1	multi-exon	FALSE	canonical	1	16024	junction_3	92796.27480430211	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	353	583	20.0	25	True	ATTAAA	-17
PB.6574.4	chr2	-	2409	11	incomplete-splice_match	LOXL3	ENST00000393937.6	2398	12	1214	4	-97	-4	5prime_fragment	FALSE	canonical	1	17063	junction_9	61704.13879797691	NA	2	NA	TRUE	NA	NA	NA	C	coding	608	1827	111	1937	25.0	2957	False	TATAAA	-14
PB.9337.8	chr5	-	4226	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	70	-12	combination_of_known_junctions	FALSE	canonical	1	52884	junction_6	182166.27878363366	NA	3	NA	TRUE	NA	NA	NA	C	coding	463	1392	580	1971	75.0	-2	True	CATAAA	-38
PB.6445.26	chr2	-	4023	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	-22	614	no_combination_of_known_junctions	FALSE	canonical	1	4001	junction_14	204681.85473201016	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	136	2319	45.0	-1	True	AATAAA	-16
PB.7040.3	chr2	-	2410	6	novel_not_in_catalog	AP1S3	novel	1785	5	NA	NA	-32	1661	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41905.20940217337	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	185	649	20.0	404	False	NA	NA
PB.3504.15	chr14	-	2068	5	novel_in_catalog	MAX	novel	330	4	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	52891	junction_1	423246.5264411511	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-2	True	AATAAA	-16
PB.10033.1	chr6	+	691	5	full-splice_match	TMEM14A	ENST00000211314.4	992	5	-11	312	-11	-312	multi-exon	FALSE	canonical	1	414816	junction_1	158098.90725171854	NA	0	NA	TRUE	NA	NA	NA	A	coding	99	300	165	464	20.0	-20	True	ATTAAA	-18
PB.6522.1	chr2	+	2753	11	full-splice_match	ARHGAP25	ENST00000409202.7	2945	11	166	26	49	-26	multi-exon	TRUE	canonical	1	65326	junction_1	46057.359365143806	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	200	2140	75.0	-2933	False	NA	NA
PB.6522.2	chr2	+	2813	10	full-splice_match	ARHGAP25	ENST00000409220.5	2939	10	109	17	6	-17	multi-exon	FALSE	canonical	1	116647	junction_3	35542.03669035816	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	329	2191	75.0	0	True	AATAAA	-3
PB.6522.3	chr2	+	2808	9	novel_in_catalog	ARHGAP25	novel	1227	8	NA	NA	-12	-26	combination_of_known_junctions	FALSE	canonical	1	9905	junction_2	63124.518726383176	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	450	2195	75.0	0	True	NA	NA
PB.6392.1	chr2	+	2302	16	full-splice_match	CLIP4	ENST00000320081.9	4293	16	114	1877	114	13	multi-exon	FALSE	canonical	1	58150	junction_1	57176.06582105254	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	142	2259	50.0	57	True	ATTAAA	-27
PB.6880.35	chr2	+	4815	13	incomplete-splice_match	ITGA4	ENST00000397033.6	4189	28	52432	-2750	11085	2750	5prime_fragment	FALSE	canonical	1	328303	junction_1	84556.80836881696	NA	2	NA	TRUE	NA	NA	NA	C	coding	421	1266	140	1405	20.0	NA	False	NA	NA
PB.190.5	chr1	-	2617	12	novel_in_catalog	PAFAH2	novel	3581	11	NA	NA	-21	-55	combination_of_known_junctions	FALSE	canonical	1	3330	junction_11	48321.772782151915	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	203	1453	90.0	-15	True	NA	NA
PB.11177.10	chr8	-	2620	9	novel_in_catalog	TRAM1	novel	3394	11	NA	NA	2	-2	intron_retention	FALSE	canonical	1	3025	junction_5	735568.8699869369	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	152	1132	20.0	-1	True	AATAAA	-16
PB.9643.1	chr5	+	1256	5	full-splice_match	PRELID1	ENST00000303204.8	1261	5	4	1	4	-1	multi-exon	FALSE	canonical	1	2260	junction_1	260680.39412600154	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	209	868	20.0	-29	True	NA	NA
PB.9081.10	chr4	+	4864	3	full-splice_match	CDKN2AIP	ENST00000302350.4	2646	3	26	-2244	26	2244	multi-exon	FALSE	canonical	1	136788	junction_2	22008.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	872	1849	45.0	0	True	AATAAA	-18
PB.6937.12	chr2	+	1753	12	full-splice_match	BZW1	ENST00000409600.5	6875	12	374	4748	-3	40	multi-exon	FALSE	canonical	1	396	junction_10	886544.858005029	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	82	1341	40.0	10	True	ATTAAA	-13
PB.9643.2	chr5	+	938	5	full-splice_match	PRELID1	ENST00000303204.8	1261	5	30	293	1	-3	multi-exon	FALSE	canonical	1	2260	junction_1	260680.39412600154	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	183	842	5.0	-3	True	ATTAAA	-18
PB.8734.9	chr4	-	3771	4	novel_not_in_catalog	TLR10	novel	3958	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1716	junction_3	14144.157576736607	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	462	2855	25.0	-1	True	NA	NA
PB.6937.15	chr2	+	2898	11	novel_in_catalog	BZW1	novel	578	6	NA	NA	0	595	no_combination_of_known_junctions	FALSE	canonical	1	396	junction_9	895807.9819025113	NA	2	1	TRUE	NA	NA	NA	C	coding	322	969	275	1243	25.0	13	True	AATAAA	-14
PB.6937.16	chr2	+	3450	12	full-splice_match	BZW1	ENST00000452790.6	1473	12	-377	-1600	56	605	multi-exon	FALSE	canonical	1	396	junction_10	858745.0072147327	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	526	1785	20.0	-5676	False	AATAAA	-24
PB.3504.14	chr14	-	2215	7	novel_in_catalog	MAX	novel	330	4	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	14926	junction_3	388941.51575954625	NA	4	1	TRUE	NA	NA	NA	C	coding	130	393	203	595	0.0	-3	True	AATAAA	-16
PB.8734.5	chr4	-	3803	3	full-splice_match	TLR10	ENST00000613579.4	3801	3	0	-2	0	2	multi-exon	FALSE	canonical	1	10557	junction_1	6151.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	492	2885	20.0	-1	True	NA	NA
PB.8734.4	chr4	-	3992	4	full-splice_match	TLR10	ENST00000308973.8	3958	4	-32	-2	0	2	multi-exon	FALSE	canonical	1	22860	junction_3	4182.1645379184	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	681	3074	20.0	-1	True	NA	NA
PB.8734.7	chr4	-	3706	3	full-splice_match	TLR10	ENST00000502321.5	676	3	-1	-3029	0	2	multi-exon	FALSE	canonical	1	3175	junction_1	9842.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	797	2394	395	2788	20.0	-1	True	NA	NA
PB.8734.6	chr4	-	3675	3	full-splice_match	TLR10	ENST00000622002.4	3673	3	0	-2	0	2	multi-exon	FALSE	canonical	1	3351	junction_2	14027.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	364	2757	20.0	-1	True	NA	NA
PB.3870.3	chr15	-	1659	9	incomplete-splice_match	LEO1	ENST00000299601.9	2193	12	10	13822	10	1368	3prime_fragment	FALSE	canonical	1	320081	junction_8	46484.382996974105	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1608	52	1659	25.0	124	False	NA	NA
PB.3870.2	chr15	-	2008	12	full-splice_match	LEO1	ENST00000299601.9	2193	12	28	157	-2	-155	multi-exon	FALSE	canonical	1	320081	junction_11	43469.33298277007	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1974	34	2007	50.0	-5	True	AATAAA	-26
PB.3870.1	chr15	-	2146	12	full-splice_match	LEO1	ENST00000299601.9	2193	12	39	8	9	-6	multi-exon	FALSE	canonical	1	320081	junction_11	43469.33298277007	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	23	2023	35.0	6	True	AATAAA	-8
PB.8734.2	chr4	-	4260	2	novel_in_catalog	TLR10	novel	3958	4	NA	NA	0	2	intron_retention	FALSE	canonical	1	22860	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	949	3342	20.0	-1	True	NA	NA
PB.5317.1	chr17	-	2624	1	novel_in_catalog	AC110285.1	novel	1573	6	NA	NA	37	-2894	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	101	306	1261	1566	85.0	8913	False	NA	NA
PB.8661.1	chr4	+	2447	1	intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	145	438	959	1396	95.0	-24	False	NA	NA
PB.9752.2	chr6	-	2515	14	full-splice_match	RANBP9	ENST00000011619.5	3113	14	595	3	595	-3	multi-exon	FALSE	canonical	1	300293	junction_12	124479.43697004217	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	152	1654	35.0	1077	False	AATAAA	-44
PB.9752.1	chr6	-	2747	15	novel_not_in_catalog	RANBP9	novel	3113	14	NA	NA	748	-3	any annotated donor/acceptor	TRUE	canonical	1	434	junction_14	219333.43257787413	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	384	1886	35.0	-1	True	AATAAA	-44
PB.1254.2	chr1	-	1884	2	novel_not_in_catalog	AC138089.1	novel	967	2	NA	NA	-157300	525	intron_retention	FALSE	canonical	1	10	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-12
PB.11426.6	chr9	+	1831	8	novel_in_catalog	SMARCA2	novel	5855	33	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	1	11930	junction_1	305656.6956549355	NA	1	1	TRUE	NA	NA	NA	C	coding	276	831	168	998	20.0	-1430	False	AATAAA	-16
PB.190.3	chr1	-	2450	11	full-splice_match	PAFAH2	ENST00000374282.7	3581	11	74	1057	-27	-54	multi-exon	FALSE	canonical	1	28346	junction_10	36915.47069400579	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	107	1285	95.0	-21	True	NA	NA
PB.5601.1	chr19	+	1951	4	full-splice_match	ZNF57	ENST00000306908.9	2003	4	45	7	45	0	multi-exon	FALSE	canonical	1	37819	junction_1	13079.563941083392	NA	0	NA	TRUE	NA	NA	NA	A	coding	555	1668	104	1771	40.0	-14	True	AATAAA	-13
PB.553.2	chr1	+	4517	1	genic	AC105942.1	novel	NA	NA	NA	NA	-216	-31404	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	44	135	187	321	25.0	-46	False	NA	NA
PB.10652.6	chr7	+	4831	29	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	36	1775	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	20177.219144415954	NA	1	NA	TRUE	NA	NA	NA	B	coding	775	2328	180	2507	25.0	36	True	AATAAA	-16
PB.8011.1	chr3	-	2874	15	full-splice_match	LRRFIP2	ENST00000421276.6	2522	15	-8	-344	-8	-4	multi-exon	FALSE	canonical	1	278383	junction_14	192362.32862275394	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	409	1683	55.0	-25	True	AATAAA	-24
PB.8011.3	chr3	-	2640	16	novel_not_in_catalog	LRRFIP2	novel	2821	14	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	canonical	1	7283	junction_14	244357.72310786947	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	521	1795	25.0	-26	True	ATTAAA	-21
PB.8011.2	chr3	-	2568	16	novel_not_in_catalog	LRRFIP2	novel	2821	14	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	267171.74881218263	NA	6	2	TRUE	NA	NA	NA	C	coding	439	1320	403	1722	25.0	-9	True	ATTAAA	-22
PB.9073.2	chr4	-	2623	7	full-splice_match	HPGD	ENST00000296522.10	3027	7	241	163	-16	-163	multi-exon	FALSE	canonical	1	182351	junction_6	46983.86514686599	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	207	1007	60.0	140	False	AATAAA	-15
PB.9073.3	chr4	-	2021	7	full-splice_match	HPGD	ENST00000296522.10	3027	7	169	837	-88	90	multi-exon	FALSE	canonical	1	182351	junction_6	46983.86514686599	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	279	1079	30.0	68	False	AATAAA	-19
PB.4904.8	chr17	-	4269	7	incomplete-splice_match	RFFL	ENST00000447669.6	2030	8	19706	-2499	-5757	3	5prime_fragment	FALSE	canonical	1	3080	junction_6	80116.28215028037	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	307	1416	10.0	-13	False	AATAAA	-15
PB.4904.9	chr17	-	4284	8	novel_in_catalog	RFFL	novel	7293	7	NA	NA	18	3	combination_of_known_junctions	FALSE	canonical	1	3349	junction_6	93485.11140501552	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	553	1431	10.0	-52	True	AATAAA	-15
PB.4904.6	chr17	-	4334	8	novel_not_in_catalog	RFFL	novel	7293	7	NA	NA	-215	-2	any annotated donor/acceptor	FALSE	canonical	1	509	junction_7	84487.72740439397	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	389	1480	5.0	5529	False	AATAAA	-16
PB.4904.7	chr17	-	4052	6	novel_in_catalog	RFFL	novel	7293	7	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	6580	junction_3	55134.169054770384	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	191	1198	5.0	-61	True	AATAAA	-16
PB.4904.4	chr17	-	4093	7	novel_in_catalog	RFFL	novel	7293	7	NA	NA	-43	-1	combination_of_known_junctions	FALSE	canonical	1	1873	junction_6	80482.74944290167	NA	1	1	TRUE	NA	NA	NA	C	coding	363	1092	147	1238	5.0	-15	True	AATAAA	-17
PB.4904.5	chr17	-	3718	6	novel_in_catalog	RFFL	novel	7293	7	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	1	40364	junction_4	75068.12140982349	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	183	863	5.0	-53	True	AATAAA	-17
PB.4904.2	chr17	-	4097	7	full-splice_match	RFFL	ENST00000315249.11	7293	7	75	3121	3	1	multi-exon	FALSE	canonical	1	54343	junction_6	65517.727394109825	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	149	1240	10.0	-19	True	AATAAA	-19
PB.4904.3	chr17	-	4137	6	novel_in_catalog	RFFL	novel	7293	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	20119	junction_1	91362.02822048117	NA	3	NA	TRUE	NA	NA	NA	C	coding	355	1068	214	1281	10.0	591	False	AATAAA	-18
PB.4904.1	chr17	-	4201	8	novel_not_in_catalog	RFFL	novel	7293	7	NA	NA	-9	2	any annotated donor/acceptor	FALSE	canonical	1	76	junction_7	84584.42191065199	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	252	1343	10.0	-4	True	AATAAA	-20
PB.11236.7	chr8	-	3833	3	full-splice_match	RBM12B	ENST00000399300.6	7269	3	8	3428	-8	621	multi-exon	FALSE	canonical	1	26913	junction_2	42466.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1001	3006	207	3212	40.0	-1	True	AATAAA	-11
PB.9768.9	chr6	+	4523	22	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	50812	junction_1	52657.938504870915	NA	1	NA	TRUE	NA	NA	NA	B	coding	822	2469	194	2662	20.0	14	True	AATAAA	-20
PB.9768.8	chr6	+	4139	20	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	6503	junction_8	64631.677573428955	NA	2	NA	TRUE	NA	NA	NA	B	coding	690	2073	207	2279	15.0	1	True	AATAAA	-19
PB.11236.6	chr8	-	3913	4	full-splice_match	RBM12B	ENST00000520560.5	588	4	-56	-3269	5	630	multi-exon	FALSE	canonical	1	39045	junction_3	32367.595740184348	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	278	3283	35.0	-4	True	AATAAA	-20
PB.9768.5	chr6	+	4112	19	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-31	1	no_combination_of_known_junctions	FALSE	canonical	1	14420	junction_7	65246.10484944439	NA	0	NA	TRUE	NA	NA	NA	B	coding	677	2034	217	2250	15.0	-9	True	AATAAA	-21
PB.9768.4	chr6	+	4508	21	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-37	0	no_combination_of_known_junctions	FALSE	canonical	1	2888	junction_1	55936.14715110436	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	179	2647	20.0	-15	True	AATAAA	-20
PB.9768.7	chr6	+	4365	21	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-22	0	no_combination_of_known_junctions	FALSE	canonical	1	7634	junction_13	62410.114166275154	NA	1	NA	TRUE	NA	NA	NA	B	coding	455	1368	208	1575	20.0	0	True	AATAAA	-20
PB.9768.6	chr6	+	4574	23	novel_not_in_catalog	KDM1B	novel	496	4	NA	NA	-27	2	any annotated donor/acceptor	FALSE	canonical	1	2905	junction_8	74298.66869028515	NA	0	NA	TRUE	NA	NA	NA	B	coding	832	2499	213	2711	20.0	-5	True	AATAAA	-22
PB.9768.1	chr6	+	4431	21	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	9093	junction_4	63284.11214388648	NA	2	NA	TRUE	NA	NA	NA	B	coding	792	2379	192	2570	20.0	16	True	AATAAA	-20
PB.9768.3	chr6	+	4644	23	novel_not_in_catalog	KDM1B	novel	496	4	NA	NA	-37	-1	any annotated donor/acceptor	FALSE	canonical	1	483	junction_16	69514.02462725129	NA	0	NA	TRUE	NA	NA	NA	B	coding	853	2562	223	2784	15.0	-15	True	AATAAA	-19
PB.9768.2	chr6	+	4325	20	novel_in_catalog	KDM1B	novel	496	4	NA	NA	-54	-1	no_combination_of_known_junctions	FALSE	canonical	1	366	junction_17	65594.50872783893	NA	3	NA	TRUE	NA	NA	NA	B	coding	741	2226	240	2465	15.0	2	True	AATAAA	-19
PB.10235.53	chr6	+	4152	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-1448	1	intron_retention	FALSE	canonical	1	375	junction_1	256631.7728908524	NA	8	1	TRUE	NA	NA	NA	C	coding	686	2061	98	2158	25.0	-6	True	AATAAA	-15
PB.9320.16	chr5	+	3876	12	incomplete-splice_match	ZFYVE16	ENST00000338008.9	6773	18	71	22813	1	4077	3prime_fragment	FALSE	canonical	1	77269	junction_1	45499.714807025564	NA	0	NA	TRUE	NA	NA	NA	C	coding	1255	3765	110	3874	60.0	-12	True	AATATA	-42
PB.10235.52	chr6	+	3712	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-1458	115	intron_retention	FALSE	canonical	1	375	junction_1	256631.7728908524	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	108	2168	75.0	-8545	False	NA	NA
PB.4603.4	chr16	+	2176	5	novel_not_in_catalog	SNAI3-AS1	novel	998	4	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	3062	junction_3	14906.979288239452	NA	1	NA	TRUE	NA	NA	NA	C	coding	98	297	2	298	15.0	0	True	AGTAAA	-17
PB.8747.13	chr4	+	5009	6	full-splice_match	UBE2K	ENST00000445950.2	2175	6	-29	-2805	8	-4	multi-exon	FALSE	canonical	1	32302	junction_5	491436.33972208446	NA	3	NA	TRUE	NA	NA	NA	C	coding	157	474	182	655	35.0	2	True	AATAAA	-21
PB.4603.2	chr16	+	2454	4	full-splice_match	SNAI3-AS1	ENST00000563475.1	2081	4	-35	-338	10	11	multi-exon	FALSE	canonical	1	21532	junction_1	8119.781318894411	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	1	318	10.0	-20	True	AGTAAA	-29
PB.4603.3	chr16	+	3928	3	full-splice_match	SNAI3-AS1	ENST00000569786.5	588	3	-15	-3325	-15	13	multi-exon	FALSE	canonical	1	21532	junction_1	9836.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	102	309	1	309	5.0	-11	True	AGTAAA	-31
PB.4603.1	chr16	+	3221	4	full-splice_match	SNAI3-AS1	ENST00000563475.1	2081	4	-39	-1101	6	774	multi-exon	TRUE	canonical	1	21532	junction_1	8119.781318894411	NA	6	NA	TRUE	NA	NA	NA	C	coding	106	321	2	322	10.0	-24	True	NA	NA
PB.8889.6	chr4	-	2323	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1512	7688	0	1393	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	14	667	30.0	7	True	NA	NA
PB.8889.7	chr4	-	2139	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1504	7880	0	1201	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	22	675	30.0	-1	True	AATAAA	-27
PB.8889.4	chr4	-	2592	7	full-splice_match	EIF4E	ENST00000280892.10	1097	7	-4	-1491	-4	1491	multi-exon	FALSE	canonical	1	191	junction_1	72406.60105957191	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	125	838	35.0	3553	False	AATAAA	-19
PB.10235.50	chr6	+	3444	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-176	-459	intron_retention	FALSE	canonical	1	33700	junction_1	293569.224634341	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	741	2474	15.0	0	True	CATAAA	-36
PB.8889.2	chr4	-	2975	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1489	7059	-15	2022	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	37	690	40.0	3501	False	AATAAA	-33
PB.8889.3	chr4	-	2831	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1504	7188	0	1893	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	22	675	40.0	-1	True	ATTAAA	-23
PB.8889.1	chr4	-	4448	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1514	5561	2	3520	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	12	665	45.0	9	True	AATAAA	-16
PB.4371.1	chr16	+	5094	31	novel_in_catalog	ITGAL	novel	5213	31	NA	NA	22	-1	combination_of_known_junctions	TRUE	canonical	1	105339	junction_1	92786.75227377859	NA	1	NA	TRUE	NA	NA	NA	A	coding	1169	3510	66	3575	5.0	-2	True	NA	NA
PB.6837.1	chr2	+	2711	4	novel_in_catalog	DLX1	novel	1022	3	NA	NA	-21	-6	combination_of_known_junctions	FALSE	canonical	1	3717	junction_1	15793.477535573558	NA	0	NA	TRUE	NA	NA	NA	A	coding	255	768	530	1297	25.0	-1	True	AGTAAA	-15
PB.399.10	chr1	+	2838	4	novel_not_in_catalog	RNF11	novel	3084	3	NA	NA	-13	-352	any annotated donor/acceptor	FALSE	canonical	1	1616	junction_2	373946.4437376026	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-329	False	CATAAA	-15
PB.8889.8	chr4	-	1922	8	full-splice_match	EIF4E	ENST00000505992.1	898	8	8	-1032	0	899	multi-exon	FALSE	canonical	1	191	junction_1	78590.32225304037	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	14	760	25.0	7	True	AATAAA	-30
PB.8889.9	chr4	-	1837	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1504	8182	0	899	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	22	675	25.0	-1	True	AATAAA	-30
PB.4252.8	chr16	-	3704	22	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	13367	junction_4	122528.65192285331	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	169	2478	5.0	-24	True	AATAAA	-20
PB.4252.9	chr16	-	3681	23	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	595	junction_13	126186.37138687834	NA	3	1	TRUE	NA	NA	NA	C	coding	580	1743	1213	2955	5.0	-2	True	AATAAA	-20
PB.11628.10	chr9	+	1807	18	novel_not_in_catalog	NAA35	novel	2649	23	NA	NA	102	-5648	any annotated donor/acceptor	FALSE	canonical	1	21662	junction_1	74535.843513367	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	128	1807	90.0	-13	True	NA	NA
PB.1938.12	chr11	-	5040	36	novel_not_in_catalog	NUP160	novel	5376	36	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	10749	junction_3	105663.11327299627	NA	0	NA	TRUE	NA	NA	NA	C	coding	1416	4251	13	4263	40.0	19	True	AATAAA	-45
PB.1938.13	chr11	-	4151	28	full-splice_match	NUP160	ENST00000528071.5	4138	28	-16	3	-16	-3	multi-exon	FALSE	canonical	1	253262	junction_24	78242.923352156	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	33	3386	20.0	-1	True	AATAAA	-19
PB.1938.10	chr11	-	5108	36	full-splice_match	NUP160	ENST00000378460.6	5376	36	117	151	-16	-1	multi-exon	FALSE	canonical	1	253262	junction_32	83031.56172781528	NA	15	3	TRUE	NA	NA	NA	C	coding	1402	4209	33	4241	45.0	-1	True	AATAAA	-41
PB.4252.3	chr16	-	3837	23	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	13	-2	combination_of_known_junctions	TRUE	canonical	1	8480	junction_22	115296.78561179937	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	193	3108	5.0	613	False	AATAAA	-23
PB.4252.4	chr16	-	3770	22	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	1	13532	junction_12	127364.96855284472	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	1498	3042	5.0	1335	False	AATAAA	-22
PB.5307.1	chr17	-	5125	5	full-splice_match	NPTX1	ENST00000306773.4	5122	5	-3	0	-3	0	multi-exon	FALSE	canonical	1	204709	junction_2	48929.21034004125	NA	1	NA	TRUE	NA	NA	NA	A	coding	432	1299	162	1460	100.0	-1	True	AAAAAG	-37
PB.1938.14	chr11	-	3452	28	full-splice_match	NUP160	ENST00000528071.5	4138	28	-15	701	-15	-701	multi-exon	FALSE	canonical	1	253262	junction_24	78242.923352156	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	32	3385	30.0	0	True	AGTAAA	-22
PB.4252.7	chr16	-	3829	23	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	3956	junction_20	127075.14515958886	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	491	3103	5.0	-26	True	AATAAA	-20
PB.8005.8	chr3	-	4763	30	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	51405	junction_29	98255.28060334636	NA	1	1	TRUE	NA	NA	NA	C	coding	1258	3777	119	3895	50.0	-1	True	AATAAA	-20
PB.8005.9	chr3	-	5415	36	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	-24	-8	no_combination_of_known_junctions	FALSE	canonical	1	69239	junction_12	94906.36059067993	NA	1	1	TRUE	NA	NA	NA	C	coding	1491	4476	72	4547	50.0	1	True	AATAAA	-20
PB.8895.9	chr4	-	2778	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	134	3163	3	-15	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	22	1161	80.0	25	True	NA	NA
PB.8895.8	chr4	-	3013	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	25	3037	25	111	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	3	NA	TRUE	NA	NA	NA	C	coding	379	1140	131	1270	50.0	-16	True	AATATA	-43
PB.8895.5	chr4	-	4274	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	93	1708	-38	804	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	4	NA	TRUE	NA	NA	NA	C	coding	379	1140	63	1202	40.0	-1	True	ATTAAA	-22
PB.10652.5	chr7	+	3621	30	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	24	510	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	25090.88481821159	NA	10	3	TRUE	NA	NA	NA	B	coding	871	2616	192	2807	30.0	24	True	AATATA	-15
PB.8895.7	chr4	-	3539	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	26	2510	26	2	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	3	NA	TRUE	NA	NA	NA	C	coding	379	1140	130	1269	30.0	-15	True	AATAAA	-23
PB.8895.6	chr4	-	3811	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	108	2156	-23	356	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	48	1187	45.0	-1	True	ATTAAA	-24
PB.2291.1	chr11	-	2530	1	antisense	novelGene_REXO2_AS_novelGene_AP002373.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.8005.7	chr3	-	6371	37	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	27921	junction_10	112043.87456641335	NA	2	1	TRUE	NA	NA	NA	C	coding	1509	4530	212	4741	55.0	26	True	AATAAA	-21
PB.8895.3	chr4	-	6053	9	novel_in_catalog	DNAJB14	novel	6075	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	1	5713	junction_4	74403.07591581396	NA	3	NA	TRUE	NA	NA	NA	C	coding	258	777	22	798	30.0	25	True	AATAAA	-19
PB.8005.5	chr3	-	5534	30	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	51405	junction_29	98255.28060334636	NA	1	1	TRUE	NA	NA	NA	C	coding	1258	3777	120	3896	35.0	-2	True	AATAAA	-29
PB.1848.1	chr11	-	3627	9	incomplete-splice_match	TSG101	ENST00000536719.5	2101	10	29	10856	-2	1119	3prime_fragment	FALSE	canonical	1	468261	junction_8	162555.34894613587	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	107	1318	65.0	0	True	NA	NA
PB.1848.2	chr11	-	2469	10	full-splice_match	TSG101	ENST00000251968.3	1824	10	333	-978	0	978	multi-exon	FALSE	canonical	1	468261	junction_9	169482.89625785433	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	84	1256	90.0	23	True	AAAACA	-20
PB.1848.3	chr11	-	1494	10	full-splice_match	TSG101	ENST00000251968.3	1824	10	328	2	-5	-2	multi-exon	FALSE	canonical	1	468261	junction_9	169482.89625785433	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	89	1261	15.0	18	True	AATAAA	-12
PB.1848.4	chr11	-	1630	11	novel_not_in_catalog	TSG101	novel	2101	10	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	14651	junction_2	347681.7042313415	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	112	1275	15.0	-5	True	AATAAA	-11
PB.1848.5	chr11	-	1566	11	novel_in_catalog	TSG101	novel	2101	10	NA	NA	15	-4	combination_of_known_junctions	FALSE	canonical	1	15165	junction_10	359798.01938732236	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	319	1335	20.0	-14	True	AATAAA	-10
PB.11932.31	chr9	+	3798	23	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	107	-31	no_combination_of_known_junctions	FALSE	canonical	1	13521	junction_1	111382.70528480614	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	99	3041	80.0	-4301	False	AATAAA	-36
PB.10978.8	chr8	+	1972	11	full-splice_match	TNKS	ENST00000520408.5	1964	11	-2	-6	-2	6	multi-exon	FALSE	canonical	1	109743	junction_8	39224.90304130783	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	29	1882	20.0	-2	True	AATAAA	-21
PB.10511.1	chr7	+	1065	8	full-splice_match	BLVRA	ENST00000265523.8	1071	8	0	6	0	-6	multi-exon	FALSE	canonical	1	422008	junction_1	118552.93027528735	NA	0	NA	TRUE	NA	NA	NA	A	coding	296	891	77	967	45.0	0	True	ATTAAA	-11
PB.318.13	chr1	+	2259	14	novel_in_catalog	CAP1	novel	3105	13	NA	NA	-2	-25	combination_of_known_junctions	FALSE	canonical	1	48081	junction_1	648440.6770576217	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	119	1546	90.0	17	True	NA	NA
PB.11932.33	chr9	+	3674	19	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	5156	-3	any annotated donor/acceptor	FALSE	canonical	1	7218	junction_1	104086.50991303603	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	176	2503	30.0	NA	False	AATAAA	-17
PB.10885.18	chr7	-	1639	5	full-splice_match	MKRN1	ENST00000443720.6	1601	5	-41	3	-4	-3	multi-exon	FALSE	canonical	1	313508	junction_3	91497.35997113523	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	197	1186	45.0	-36	False	AATAAA	-13
PB.4624.2	chr16	+	2189	3	incomplete-splice_match	VPS9D1-AS1	ENST00000562866.1	1753	4	-4	7	-4	-6	intron_retention	FALSE	canonical	1	84179	junction_2	1609.5	NA	17	NA	TRUE	NA	NA	NA	C	coding	186	561	1503	2063	15.0	0	True	NA	NA
PB.10023.10	chr6	+	3408	7	novel_not_in_catalog	CD2AP	novel	5412	18	NA	NA	347	-338	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	144436.64353811173	NA	3	1	TRUE	NA	NA	NA	C	coding	144	435	276	710	20.0	-76	False	AATAAA	-18
PB.5107.5	chr17	+	2224	8	novel_in_catalog	EME1	novel	2354	9	NA	NA	2	-4	intron_retention	FALSE	canonical	1	12729	junction_3	44230.85706903298	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	59	1684	35.0	-5	True	AATAAA	-38
PB.842.1	chr1	-	4082	8	novel_not_in_catalog	AIM2	novel	1529	6	NA	NA	135	6353	intron_retention	FALSE	canonical	1	9290	junction_1	38764.865087670645	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	155	1186	30.0	-3	True	NA	NA
PB.2814.2	chr12	+	3431	11	full-splice_match	METAP2	ENST00000323666.9	3601	11	165	5	-34	-5	multi-exon	FALSE	canonical	1	910898	junction_8	167755.9738775642	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	65	1501	25.0	-6	True	AGTAAA	-13
PB.2814.3	chr12	+	1876	11	full-splice_match	METAP2	ENST00000546753.5	1862	11	35	-49	-34	6	multi-exon	FALSE	canonical	1	4256	junction_3	378095.9163191399	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	65	1432	20.0	-6	True	AATAAA	-23
PB.10827.6	chr7	+	1339	9	full-splice_match	METTL2B	ENST00000262432.12	2182	9	20	823	0	-25	multi-exon	FALSE	canonical	1	3756	junction_5	70944.62439191129	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	18	1154	70.0	-41	False	NA	NA
PB.2814.1	chr12	+	2349	11	full-splice_match	METAP2	ENST00000323666.9	3601	11	172	1080	-27	417	multi-exon	FALSE	canonical	1	910898	junction_8	167755.9738775642	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	58	1494	80.0	1	True	ATTAAA	-9
PB.10827.1	chr7	+	1646	9	full-splice_match	METTL2B	ENST00000262432.12	2182	9	-3	539	-3	259	multi-exon	TRUE	canonical	1	3756	junction_5	70944.62439191129	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	41	1177	15.0	-64	False	AAAAAG	-19
PB.2814.4	chr12	+	1912	11	full-splice_match	METAP2	ENST00000323666.9	3601	11	200	1489	1	8	multi-exon	FALSE	canonical	1	910898	junction_8	167755.9738775642	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	30	1466	20.0	-4	True	AATAAA	-25
PB.10827.3	chr7	+	2407	10	novel_not_in_catalog	AC010655.4	novel	707	5	NA	NA	20908	12743	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	70498.23212440626	NA	4	NA	TRUE	NA	NA	NA	B	coding	378	1137	19	1155	15.0	-42	False	AATAAA	-18
PB.8816.2	chr4	-	2356	7	novel_not_in_catalog	COX18	novel	6846	6	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	52543.76052713903	NA	4	1	TRUE	NA	NA	NA	C	coding	334	1005	75	1079	20.0	-8	True	AATAAA	-23
PB.10827.8	chr7	+	3072	9	novel_not_in_catalog	AC010655.4	novel	707	5	NA	NA	20917	10218	intron_retention	TRUE	canonical	1	176	junction_8	70826.78546979508	NA	16	NA	TRUE	NA	NA	NA	B	coding	242	729	624	1352	25.0	-33	True	AATAAA	-20
PB.10827.9	chr7	+	2419	10	novel_not_in_catalog	AC010655.4	novel	707	5	NA	NA	20921	11406	intron_retention	FALSE	canonical	0	0	junction_9	70498.23212440626	NA	4	1	TRUE	NA	NA	NA	B	coding	378	1137	6	1142	90.0	-29	True	NA	NA
PB.1876.2	chr11	+	3837	7	novel_not_in_catalog	PRRG4	novel	5530	6	NA	NA	-154	-1253	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	33668.76821823652	NA	32	1	TRUE	NA	NA	NA	B	coding	226	681	408	1088	20.0	0	True	NA	NA
PB.1876.1	chr11	+	1637	4	novel_not_in_catalog	PRRG4	novel	5530	6	NA	NA	-210	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	32920.5347094417	NA	0	NA	TRUE	NA	NA	NA	B	coding	207	624	50	673	15.0	-16	True	AATAAA	-14
PB.4624.4	chr16	+	3106	4	full-splice_match	VPS9D1-AS1	ENST00000562866.1	1753	4	22	-1375	22	1375	multi-exon	FALSE	canonical	1	24230	junction_3	29048.696253016245	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	1038	1598	35.0	0	True	NA	NA
PB.7084.3	chr2	+	3597	6	full-splice_match	SH3BP4	ENST00000392011.6	5194	6	44	1553	-18	-1487	multi-exon	FALSE	canonical	1	84063	junction_1	101658.04051151095	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	361	3252	10.0	0	True	CATAAA	-27
PB.7348.1	chr20	-	2235	1	antisense	novelGene_SLC9A8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	226	681	2	682	10.0	1147	False	AATAAA	-16
PB.11959.1	chrX	-	1721	9	novel_not_in_catalog	GPR143	novel	1762	9	NA	NA	116	-61	any annotated donor/acceptor	FALSE	canonical	1	2796	junction_1	19252.484610758685	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	32	1192	15.0	-2	True	AATAAA	-21
PB.11959.2	chrX	-	1596	9	full-splice_match	GPR143	ENST00000467482.5	1762	9	100	66	100	-66	multi-exon	FALSE	canonical	1	18446	junction_8	17466.221228416867	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	48	1262	15.0	171	False	AATAAA	-16
PB.8816.3	chr4	-	2057	7	novel_not_in_catalog	COX18	novel	6846	6	NA	NA	10	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	50580.34909401301	NA	9	NA	TRUE	NA	NA	NA	C	coding	333	1002	68	1069	20.0	-1	True	AATAAA	-22
PB.2505.9	chr12	-	4372	25	novel_in_catalog	C2CD5	novel	4436	25	NA	NA	19	-9	no_combination_of_known_junctions	FALSE	canonical	1	3896	junction_23	79497.42695115463	NA	3	NA	TRUE	NA	NA	NA	C	coding	988	2967	238	3204	55.0	7	True	AATAAA	-9
PB.2505.8	chr12	-	4466	26	novel_in_catalog	C2CD5	novel	4436	25	NA	NA	12	-9	combination_of_known_junctions	FALSE	canonical	1	14020	junction_3	65644.80400524019	NA	1	NA	TRUE	NA	NA	NA	C	coding	1017	3054	245	3298	55.0	0	True	AATAAA	-9
PB.6440.11	chr2	-	3384	20	incomplete-splice_match	THADA	ENST00000405975.6	6114	38	7	318229	-1	3003	3prime_fragment	FALSE	canonical	1	67415	junction_19	26236.741672298933	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	134	3277	35.0	-2	True	AATAAA	-24
PB.2505.4	chr12	-	4404	25	full-splice_match	C2CD5	ENST00000333957.8	4436	25	36	-4	-18	4	multi-exon	FALSE	canonical	1	150106	junction_24	43010.44216064474	NA	1	NA	TRUE	NA	NA	NA	C	coding	1000	3003	221	3223	30.0	24	True	AATAAA	-22
PB.2505.7	chr12	-	4503	27	novel_in_catalog	C2CD5	novel	4436	25	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	1	10209	junction_4	69487.21601419822	NA	0	NA	TRUE	NA	NA	NA	C	coding	1041	3126	210	3335	55.0	35	True	AATAAA	-9
PB.2505.6	chr12	-	4366	26	full-splice_match	C2CD5	ENST00000542676.5	3438	26	61	-989	-3	-9	multi-exon	FALSE	canonical	1	69439	junction_4	63134.20176625661	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	43	3198	55.0	0	True	AATAAA	-9
PB.2505.1	chr12	-	4598	27	full-splice_match	C2CD5	ENST00000446597.5	3490	27	-132	-976	5	14	multi-exon	FALSE	canonical	1	69439	junction_4	63400.734956412874	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	252	3407	20.0	-7	True	AATAAA	-32
PB.2505.3	chr12	-	4178	24	incomplete-splice_match	C2CD5	ENST00000333957.8	4436	25	389	9	32	-9	5prime_fragment	FALSE	canonical	1	160882	junction_3	40190.4125045915	NA	0	NA	TRUE	NA	NA	NA	C	coding	1000	3003	8	3010	55.0	377	False	AATAAA	-9
PB.2505.2	chr12	-	4658	28	novel_in_catalog	C2CD5	novel	4436	25	NA	NA	-19	9	no_combination_of_known_junctions	FALSE	canonical	1	3836	junction_20	86714.10047067869	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	1301	3472	20.0	23	True	AATAAA	-27
PB.7798.14	chr22	+	3587	6	full-splice_match	MIEF1	ENST00000433117.6	3838	6	32	219	-19	-17	multi-exon	FALSE	canonical	1	99354	junction_4	74876.99412609992	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	892	1749	85.0	-28	True	NA	NA
PB.7798.15	chr22	+	4211	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	-16	1430	-16	322	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	441	1832	70.0	-25	True	NA	NA
PB.7798.16	chr22	+	5032	8	novel_not_in_catalog	MIEF1	novel	573	3	NA	NA	-15	-859	intron_retention	FALSE	canonical	1	960	junction_2	126196.86843231272	NA	7	2	TRUE	NA	NA	NA	C	coding	463	1392	691	2082	5.0	-24	True	AATAAA	-12
PB.7798.17	chr22	+	3733	7	full-splice_match	MIEF1	ENST00000428069.1	1379	7	-59	-2295	-15	-17	multi-exon	FALSE	canonical	1	11156	junction_2	115894.03118174616	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	1038	1895	85.0	-24	True	NA	NA
PB.7798.10	chr22	+	4791	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	-25	859	-25	-859	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	4	NA	TRUE	NA	NA	NA	C	coding	463	1392	450	1841	5.0	-34	True	AATAAA	-12
PB.7798.11	chr22	+	3720	7	novel_not_in_catalog	MIEF1	novel	573	3	NA	NA	-24	-17	intron_retention	FALSE	canonical	1	4082	junction_2	117332.70965317196	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	1025	1882	85.0	-33	True	NA	NA
PB.7798.12	chr22	+	3230	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	36	2359	-6	65	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	389	1780	15.0	-8	True	NA	NA
PB.7798.13	chr22	+	4904	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	-19	740	-19	-740	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	444	1835	35.0	-28	True	AATAAA	-18
PB.11945.5	chrX	-	2427	2	full-splice_match	ZBED1	ENST00000461691.6	947	2	-81	-1399	-9	-320	multi-exon	FALSE	canonical	1	195	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	214	2298	55.0	-1	True	NA	NA
PB.11945.2	chrX	-	2351	4	novel_in_catalog	DHRSX	novel	2571	7	NA	NA	-32	-52664	combination_of_known_junctions	FALSE	canonical	1	254	junction_3	306.6670289852932	NA	4	NA	TRUE	NA	NA	NA	C	coding	97	294	86	379	30.0	1825	False	NA	NA
PB.11945.3	chrX	-	4689	2	full-splice_match	ZBED1	ENST00000381218.8	2832	2	-107	-1750	-107	-22	multi-exon	FALSE	canonical	1	62	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	406	2490	20.0	2173	False	AATAAA	-13
PB.11945.1	chrY	-	2567	7	full-splice_match	DHRSX	ENST00000334651.10_PAR_Y	2571	7	3	1	-2	-1	multi-exon	FALSE	canonical	1	21	junction_6	78.056959259818	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	51	1043	60.0	NA	False	AATAAA	-19
PB.10837.3	chr7	-	4761	5	full-splice_match	UBE2H	ENST00000473814.6	535	5	-24	-4202	-24	-3	multi-exon	FALSE	canonical	1	33482	junction_2	271483.6764927129	NA	2	NA	TRUE	NA	NA	NA	C	coding	152	459	101	559	30.0	271	False	AATAAA	-18
PB.10837.2	chr7	-	4788	7	full-splice_match	UBE2H	ENST00000355621.7	5151	7	358	5	40	-5	multi-exon	FALSE	canonical	1	140291	junction_2	226812.32917283304	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	37	588	25.0	335	False	AATAAA	-16
PB.841.14	chr1	+	2608	10	incomplete-splice_match	IFI16	ENST00000368132.7	2704	11	-12	1204	-12	-1177	3prime_fragment	FALSE	canonical	1	295	junction_7	336182.2951958294	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	277	2400	50.0	-21	True	AATAAA	-41
PB.5834.1	chr19	+	996	7	full-splice_match	IFI30	ENST00000407280.3	1134	7	143	-5	143	5	multi-exon	FALSE	canonical	1	2063283	junction_1	703903.6637277387	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	33	785	25.0	-3	True	AGTAAA	-21
PB.5834.3	chr19	+	2054	6	novel_in_catalog	AC007192.1	novel	5142	25	NA	NA	20655	0	intron_retention	FALSE	canonical	1	3369777	junction_3	370216.9906670411	NA	1	NA	TRUE	NA	NA	NA	A	coding	160	483	1366	1848	20.0	0	True	AGTAAA	-16
PB.5834.2	chr19	+	2478	5	full-splice_match	IFI30	ENST00000600463.1	2116	5	-358	-4	144	4	multi-exon	FALSE	canonical	1	3369777	junction_3	407550.96337850805	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	1368	1814	25.0	-2	True	AGTAAA	-20
PB.1636.1	chr10	-	4683	9	novel_in_catalog	SH3PXD2A	novel	11468	15	NA	NA	366	-773	no_combination_of_known_junctions	FALSE	canonical	1	51748	junction_8	43458.51253997886	NA	1	NA	TRUE	NA	NA	NA	A	coding	995	2988	173	3160	5.0	-69	False	AATAAA	-22
PB.10837.8	chr7	-	2463	7	full-splice_match	UBE2H	ENST00000355621.7	5151	7	244	2444	17	1761	multi-exon	FALSE	canonical	1	140291	junction_2	226812.32917283304	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	151	702	70.0	221	False	TATAAA	-33
PB.3951.1	chr15	+	5121	5	full-splice_match	GLCE	ENST00000261858.6	5037	5	-84	0	-34	0	multi-exon	FALSE	canonical	1	46851	junction_1	39687.24783463197	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	313	2166	55.0	-34	True	AATAAA	-12
PB.3951.3	chr15	+	5191	6	novel_in_catalog	GLCE	novel	1308	3	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	2806	junction_2	58053.26685863596	NA	5	NA	TRUE	NA	NA	NA	C	coding	617	1854	383	2236	55.0	-14	True	AATAAA	-12
PB.3951.2	chr15	+	5012	4	novel_in_catalog	GLCE	novel	1308	3	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	1190	junction_1	65057.74776987664	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	204	2057	55.0	-16	True	AATAAA	-12
PB.9383.4	chr5	+	1734	5	incomplete-splice_match	SLC25A46	ENST00000447245.6	1575	8	-25	12934	22	-7701	3prime_fragment	FALSE	canonical	1	222703	junction_1	70153.74532900934	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	105	680	90.0	9	True	NA	NA
PB.4683.7	chr17	-	2851	16	incomplete-splice_match	PELP1	ENST00000574876.5	3465	17	-3	776	-3	697	3prime_fragment	FALSE	canonical	1	293921	junction_13	94539.59624091674	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2829	22	2850	55.0	4	True	NA	NA
PB.9383.6	chr5	+	3464	8	full-splice_match	SLC25A46	ENST00000355943.7	2385	8	26	-1105	-21	1105	multi-exon	FALSE	canonical	1	222703	junction_1	88395.39417519305	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	101	1357	45.0	13	True	AGTAAA	-38
PB.4683.5	chr17	-	3344	16	novel_not_in_catalog	PELP1	novel	5272	17	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_10	157303.44121714425	NA	3	1	TRUE	NA	NA	NA	C	coding	806	2421	871	3291	5.0	-9	True	AATAAA	-19
PB.4683.2	chr17	-	3262	17	novel_not_in_catalog	PELP1	novel	5272	17	NA	NA	-7067	0	intron_retention	FALSE	canonical	1	721	junction_16	149644.86794333224	NA	4	1	TRUE	NA	NA	NA	C	coding	983	2952	257	3208	5.0	-5	True	AATAAA	-20
PB.9383.1	chr5	+	3375	9	novel_not_in_catalog	SLC25A46	novel	558	8	NA	NA	-20	-5	any annotated donor/acceptor	FALSE	canonical	1	12748	junction_8	148972.85874782695	NA	2	NA	TRUE	NA	NA	NA	C	coding	332	999	147	1145	15.0	-33	False	AATAAA	-13
PB.9383.2	chr5	+	3029	8	full-splice_match	SLC25A46	ENST00000355943.7	2385	8	44	-688	-3	688	multi-exon	FALSE	canonical	1	222703	junction_1	88395.39417519305	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	83	1339	25.0	31	True	AATAAA	-20
PB.4683.1	chr17	-	3466	17	full-splice_match	PELP1	ENST00000574876.5	3465	17	0	-1	0	1	multi-exon	FALSE	canonical	1	293921	junction_14	100219.97788544645	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	19	3411	0.0	7	True	AATAAA	-21
PB.8440.3	chr3	-	2240	10	novel_in_catalog	TFDP2	novel	9857	13	NA	NA	35	-10	no_combination_of_known_junctions	FALSE	canonical	1	254	junction_9	176859.93752565968	NA	2	1	TRUE	NA	NA	NA	C	coding	390	1173	67	1239	25.0	5	True	AAGAAA	-20
PB.8440.2	chr3	-	3429	11	full-splice_match	TFDP2	ENST00000486111.5	2360	11	3	-1072	3	1072	multi-exon	FALSE	canonical	1	121676	junction_6	134651.4332088968	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	186	1346	65.0	517	False	GATAAA	-11
PB.8440.1	chr3	-	4011	13	novel_not_in_catalog	TFDP2	novel	9857	13	NA	NA	-8	-103	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	190163.51129990665	NA	4	NA	TRUE	NA	NA	NA	C	coding	386	1161	178	1338	60.0	525	False	ATTAAA	-3
PB.9383.8	chr5	+	2356	8	full-splice_match	SLC25A46	ENST00000355943.7	2385	8	27	2	-20	-2	multi-exon	FALSE	canonical	1	222703	junction_1	88395.39417519305	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	100	1356	15.0	14	True	ATTAAA	-12
PB.9383.9	chr5	+	2658	8	full-splice_match	SLC25A46	ENST00000355943.7	2385	8	32	-305	-15	305	multi-exon	FALSE	canonical	1	222703	junction_1	88395.39417519305	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	95	1351	15.0	19	True	AATAAA	-27
PB.1894.1	chr11	-	2602	1	antisense	novelGene_CD44_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	AAAAAG	-37
PB.8440.4	chr3	-	2786	13	full-splice_match	TFDP2	ENST00000489671.5	9857	13	-14	7085	2	-11	multi-exon	FALSE	canonical	1	92807	junction_12	149456.45430628132	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	446	1786	20.0	-12	True	AAGAAA	-19
PB.5319.7	chr17	-	2135	5	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	391	junction_1	14870678.379368313	NA	1	1	TRUE	NA	NA	NA	C	coding	253	762	806	1567	20.0	-3	True	AATAAA	-16
PB.5319.6	chr17	-	1916	6	full-splice_match	ACTG1	ENST00000573283.7	1919	6	-2	5	-2	-3	multi-exon	FALSE	canonical	1	17727597	junction_2	8767577.964864034	NA	9	NA	TRUE	NA	NA	NA	C	coding	375	1128	75	1202	25.0	-3	True	AATAAA	-13
PB.5319.3	chr17	-	2047	6	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	391	junction_1	14562833.759043608	NA	2	1	TRUE	NA	NA	NA	C	coding	253	762	717	1478	15.0	-3	True	AATAAA	-17
PB.5319.2	chr17	-	2189	5	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	17727597	junction_2	8070932.884853131	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	710	1471	15.0	1962	False	AATAAA	-17
PB.7372.2	chr20	+	1606	12	full-splice_match	RAE1	ENST00000371242.6	2362	12	2	754	2	-6	multi-exon	FALSE	canonical	1	26189	junction_1	215777.235658552	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	142	1248	5.0	-30	True	AATAAA	-18
PB.7372.3	chr20	+	1758	13	novel_not_in_catalog	RAE1	novel	2639	12	NA	NA	6	-2	any annotated donor/acceptor	FALSE	canonical	1	14503	junction_11	267458.6094072808	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	202	1275	5.0	-26	True	AATAAA	-22
PB.4738.6	chr17	-	5055	4	full-splice_match	ZBTB4	ENST00000380599.8	5866	4	44	767	44	-767	multi-exon	FALSE	canonical	1	138268	junction_3	101902.89159129228	NA	0	NA	TRUE	NA	NA	NA	C	coding	1013	3042	207	3248	85.0	-1	True	NA	NA
PB.5319.9	chr17	-	2038	6	full-splice_match	ACTG1	ENST00000644774.1	1539	6	17	-516	-2	0	multi-exon	FALSE	canonical	1	173325	junction_5	13385280.514749333	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	194	1321	20.0	-3	True	AATAAA	-16
PB.5319.8	chr17	-	1747	7	full-splice_match	ACTG1	ENST00000576544.5	1720	7	-11	-16	-3	2	multi-exon	FALSE	canonical	1	391	junction_1	13487945.13388938	NA	1	1	TRUE	NA	NA	NA	C	coding	375	1128	76	1203	45.0	-4	True	NA	NA
PB.4738.3	chr17	-	5925	4	full-splice_match	ZBTB4	ENST00000311403.4	5956	4	12	19	12	-19	multi-exon	FALSE	canonical	1	51114	junction_3	141024.86931822423	NA	1	NA	TRUE	NA	NA	NA	C	coding	1013	3042	329	3370	35.0	-3	True	AATAAA	-11
PB.4738.2	chr17	-	5821	4	full-splice_match	ZBTB4	ENST00000380599.8	5866	4	44	1	44	-1	multi-exon	FALSE	canonical	1	138268	junction_3	101902.89159129228	NA	0	NA	TRUE	NA	NA	NA	C	coding	1013	3042	207	3248	25.0	-1	True	AATAAA	-29
PB.3354.2	chr14	+	2137	10	full-splice_match	NOP9	ENST00000267425.7	6033	10	-12	3908	-12	0	multi-exon	FALSE	canonical	1	205837	junction_1	60117.804172051525	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	106	2016	25.0	0	True	NA	NA
PB.3354.3	chr14	+	6045	10	full-splice_match	NOP9	ENST00000267425.7	6033	10	-11	-1	-11	1	multi-exon	FALSE	canonical	1	205837	junction_1	60117.804172051525	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	105	2015	10.0	1	True	NA	NA
PB.3354.1	chr14	+	6096	10	novel_not_in_catalog	NOP9	novel	6033	10	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	40189	junction_2	94789.48565696045	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	116	2068	10.0	-10	True	NA	NA
PB.3354.4	chr14	+	5092	10	full-splice_match	NOP9	ENST00000267425.7	6033	10	-11	952	-11	-938	multi-exon	FALSE	canonical	1	205837	junction_1	60117.804172051525	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	105	2015	10.0	1	True	NA	NA
PB.3354.5	chr14	+	5130	10	novel_not_in_catalog	NOP9	novel	6033	10	NA	NA	-8	-939	intron_retention	FALSE	canonical	1	40189	junction_2	94789.48565696045	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	102	2054	10.0	4	True	NA	NA
PB.2065.1	chr11	-	2658	4	full-splice_match	RNASEH2C	ENST00000308418.8	2794	4	134	2	5	-2	multi-exon	FALSE	canonical	1	532021	junction_3	284378.89285989956	NA	0	NA	TRUE	NA	NA	NA	A	coding	164	495	56	550	35.0	-16	True	AATAAA	-19
PB.2519.6	chr12	+	4037	13	novel_in_catalog	STK38L	novel	545	5	NA	NA	-9	-868	no_combination_of_known_junctions	FALSE	canonical	1	4036	junction_12	112125.26119404731	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	105	1337	20.0	-47	True	ATTAAA	-17
PB.2519.7	chr12	+	3978	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	106	984	-5	-984	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	20	2	TRUE	NA	NA	NA	C	coding	462	1389	70	1458	15.0	-12	True	ATTAAA	-13
PB.2519.4	chr12	+	4011	13	novel_in_catalog	STK38L	novel	545	5	NA	NA	9	-867	combination_of_known_junctions	FALSE	canonical	1	20376	junction_3	109748.63564591084	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	109	1374	20.0	-51	True	ATTAAA	-18
PB.2519.5	chr12	+	3310	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	67	1691	9	1334	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	109	1497	35.0	-51	True	ATTAAA	-22
PB.2519.2	chr12	+	2420	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	66	2582	8	443	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	110	1498	35.0	-52	True	ATTAAA	-20
PB.2519.3	chr12	+	4825	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	67	176	9	-176	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	109	1497	50.0	-51	True	AATAAA	-3
PB.2519.1	chr12	+	2230	2	full-splice_match	STK38L	ENST00000434385.2	757	2	-46	-1427	7	1427	multi-exon	FALSE	canonical	1	182244	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-53	True	NA	NA
PB.11316.1	chr8	-	3734	7	full-splice_match	MRPL13	ENST00000306185.7	1086	7	233	-2881	-54	2471	multi-exon	FALSE	canonical	1	958590	junction_3	68867.60704343436	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	132	596	10.0	-4	True	NA	NA
PB.2519.8	chr12	+	2535	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	77	2456	-3	569	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	99	1487	20.0	-41	True	NA	NA
PB.2519.9	chr12	+	1953	15	novel_not_in_catalog	STK38L	novel	545	5	NA	NA	-3	37	any annotated donor/acceptor	FALSE	canonical	1	3039	junction_1	129184.46653455023	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	300	1688	25.0	-41	True	AATAAA	-21
PB.9812.1	chr6	+	3223	1	full-splice_match	HIST1H3H	ENST00000369163.3	1237	1	-1891	-95	-1891	95	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	130	393	38	430	20.0	0	True	NA	NA
PB.10299.4	chr6	-	1574	4	full-splice_match	TMEM242	ENST00000400788.8	4043	4	-630	3099	-630	-3099	multi-exon	FALSE	canonical	1	95476	junction_2	110079.04133646676	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	733	1158	45.0	-142	False	ATTAAA	-25
PB.9812.3	chr6	+	2697	1	full-splice_match	HIST1H2AI	ENST00000358739.4	503	1	-26	-2168	-26	2168	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	130	393	38	430	40.0	0	True	AATAAA	-16
PB.9812.2	chr6	+	4537	1	full-splice_match	HIST1H3H	ENST00000369163.3	1237	1	-1891	-1409	-1891	1409	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	130	393	38	430	80.0	0	True	NA	NA
PB.10299.1	chr6	-	2875	4	full-splice_match	TMEM242	ENST00000400788.8	4043	4	66	1102	66	-1102	multi-exon	FALSE	canonical	1	95476	junction_2	110079.04133646676	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	37	462	5.0	-22	True	NA	NA
PB.318.19	chr1	+	2567	14	novel_not_in_catalog	CAP1	novel	3105	13	NA	NA	13	-25	any annotated donor/acceptor	FALSE	canonical	1	8515	junction_1	653473.6904272998	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	427	1854	90.0	-1	True	NA	NA
PB.10299.3	chr6	-	1578	4	full-splice_match	TMEM242	ENST00000400788.8	4043	4	79	2386	79	-2386	multi-exon	FALSE	canonical	1	95476	junction_2	110079.04133646676	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	24	449	30.0	-9	True	AATAAA	-17
PB.7646.1	chr22	+	3312	3	full-splice_match	GNAZ	ENST00000615612.1	3333	3	17	4	17	-4	multi-exon	FALSE	canonical	1	30544	junction_1	44177.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	355	1068	643	1710	15.0	-168	False	AATAAA	-16
PB.8525.12	chr3	-	2396	1	novel_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	4448	-29392	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	7546	False	NA	NA
PB.1084.1	chr1	-	6204	2	full-splice_match	YOD1	ENST00000315927.8	6265	2	62	-1	62	1	multi-exon	FALSE	canonical	1	218296	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	121	1032	20.0	-27	True	AATAAA	-16
PB.1084.3	chr1	-	3915	2	full-splice_match	YOD1	ENST00000315927.8	6265	2	66	2284	66	-2284	multi-exon	FALSE	canonical	1	218296	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	117	1028	5.0	-23	True	AATAAA	-21
PB.3645.9	chr14	-	7607	30	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-9	-552	combination_of_known_junctions	FALSE	canonical	1	10578	junction_27	98725.06212539098	NA	2	NA	TRUE	NA	NA	NA	C	coding	1912	5739	588	6326	70.0	-22	True	GATAAA	-28
PB.3645.5	chr14	-	10287	27	full-splice_match	DICER1	ENST00000343455.7	10277	27	-11	1	-11	0	multi-exon	FALSE	canonical	1	56664	junction_26	71003.36729294175	NA	3	NA	TRUE	NA	NA	NA	C	coding	1912	5739	280	6018	10.0	7143	False	AATAAA	-15
PB.12339.1	chrX	-	1403	11	full-splice_match	RENBP	ENST00000393700.7	1388	11	-22	7	-22	5	multi-exon	FALSE	canonical	1	88293	junction_2	26840.43571945135	NA	1	NA	TRUE	NA	NA	NA	A	coding	427	1284	104	1387	5.0	8665	False	AATAAA	-16
PB.3645.7	chr14	-	2744	1	incomplete-splice_match	DICER1	ENST00000343455.7	10277	27	68450	1	2350	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	NA	False	AATAAA	-15
PB.3645.6	chr14	-	10222	27	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-43	0	intron_retention	FALSE	canonical	1	3676	junction_26	77392.02485059331	NA	12	1	TRUE	NA	NA	NA	C	coding	1912	5739	215	5953	10.0	-1	True	AATAAA	-15
PB.232.5	chr1	+	5840	20	novel_in_catalog	EPB41	novel	5968	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	6153	junction_15	249561.36280827958	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	728	2632	75.0	-2	True	NA	NA
PB.3645.2	chr14	-	10550	29	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-42	0	intron_retention	TRUE	canonical	1	37694	junction_28	85094.55519312211	NA	5	NA	TRUE	NA	NA	NA	C	coding	1912	5739	542	6280	5.0	0	True	AATAAA	-16
PB.4073.1	chr15	-	2657	11	full-splice_match	IDH2	ENST00000330062.7	2694	11	-8	45	-8	-45	multi-exon	FALSE	canonical	1	662810	junction_10	589972.7763783681	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	123	1481	70.0	-45	True	NA	NA
PB.4073.3	chr15	-	2556	11	full-splice_match	IDH2	ENST00000330062.7	2694	11	33	105	-3	-105	multi-exon	FALSE	canonical	1	662810	junction_10	589972.7763783681	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	82	1440	100.0	-4	True	NA	NA
PB.4073.2	chr15	-	2393	9	full-splice_match	IDH2	ENST00000560061.1	1449	9	3	-947	3	-4	multi-exon	FALSE	canonical	1	13488	junction_8	821840.029191813	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	208	1176	30.0	2	True	AATAAA	-26
PB.4073.5	chr15	-	1722	11	full-splice_match	IDH2	ENST00000330062.7	2694	11	36	936	0	15	multi-exon	FALSE	canonical	1	662810	junction_10	589972.7763783681	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	79	1437	15.0	-1	True	AAAAAG	-10
PB.4073.4	chr15	-	2117	11	full-splice_match	IDH2	ENST00000330062.7	2694	11	26	551	-1	400	multi-exon	FALSE	canonical	1	662810	junction_10	589972.7763783681	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	89	1447	10.0	-11	True	AAAAAG	-15
PB.4073.6	chr15	-	1516	1	novel_in_catalog	IDH2	novel	2694	11	NA	NA	0	-16776	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	106	321	79	399	90.0	-1	True	NA	NA
PB.10285.4	chr6	-	1847	12	novel_in_catalog	RMND1	novel	2003	12	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	21433	junction_9	81787.84542505523	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	785	1501	80.0	-1	True	NA	NA
PB.7052.32	chr2	-	6520	41	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-4	227	intron_retention	FALSE	canonical	1	107921	junction_25	271200.2141137614	NA	1	NA	TRUE	NA	NA	NA	C	coding	1998	5997	184	6180	15.0	-19	True	AATAAA	-17
PB.3744.1	chr15	-	3011	14	novel_in_catalog	TRPM1	novel	5687	27	NA	NA	0	14309	intron_retention	FALSE	canonical	1	2543	junction_4	8284.235678035166	NA	1	NA	TRUE	NA	NA	NA	B	coding	783	2352	129	2480	70.0	-1	True	NA	NA
PB.10285.3	chr6	-	1737	12	full-splice_match	RMND1	ENST00000367303.9	1856	12	84	35	-24	-5	multi-exon	FALSE	canonical	1	103928	junction_11	50842.028449009755	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	42	1391	80.0	-6	True	NA	NA
PB.3744.3	chr15	-	1677	11	incomplete-splice_match	TRPM1	ENST00000256552.10	5514	28	1	58943	1	-42	3prime_fragment	FALSE	canonical	1	814	junction_9	8601.823585728784	NA	0	NA	TRUE	NA	NA	NA	B	coding	431	1296	148	1443	75.0	0	True	NA	NA
PB.3744.2	chr15	-	1597	10	incomplete-splice_match	TRPM1	ENST00000397795.6	5687	27	-19	59216	1	-42	3prime_fragment	FALSE	canonical	1	11701	junction_4	4475.691945952237	NA	1	NA	TRUE	NA	NA	NA	B	coding	409	1230	134	1363	75.0	-6	True	NA	NA
PB.4702.6	chr17	-	2388	5	full-splice_match	SCIMP	ENST00000399600.8	1173	5	12	-1227	12	38	multi-exon	FALSE	canonical	1	56047	junction_3	61773.98652143149	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	94	510	20.0	-31	True	AAAACA	-11
PB.4702.7	chr17	-	2285	4	novel_in_catalog	SCIMP	novel	2383	5	NA	NA	12	38	no_combination_of_known_junctions	FALSE	canonical	1	5485	junction_3	95114.5323117813	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	668	982	20.0	-31	True	AAAACA	-11
PB.4702.4	chr17	-	2519	6	novel_not_in_catalog	SCIMP	novel	2383	5	NA	NA	0	1779	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83730.6130836267	NA	4	1	TRUE	NA	NA	NA	C	coding	138	417	106	522	40.0	-43	True	NA	NA
PB.4702.5	chr17	-	2392	5	full-splice_match	SCIMP	ENST00000574081.5	2383	5	29	-38	-8	38	multi-exon	FALSE	canonical	1	143834	junction_3	28591.404157324978	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	77	514	20.0	-14	True	AAAACA	-11
PB.4702.2	chr17	-	3140	6	novel_not_in_catalog	SCIMP	novel	2383	5	NA	NA	12	1779	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	76115.8144477217	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	94	531	40.0	-31	True	NA	NA
PB.4702.3	chr17	-	3140	6	novel_not_in_catalog	SCIMP	novel	2383	5	NA	NA	-3	1779	any annotated donor/acceptor	FALSE	canonical	1	42	junction_1	83717.9908158336	NA	5	1	TRUE	NA	NA	NA	C	coding	138	417	109	525	40.0	-46	True	NA	NA
PB.9202.2	chr5	+	4411	10	novel_not_in_catalog	GHR	novel	4560	10	NA	NA	441	-50	any annotated donor/acceptor	FALSE	canonical	1	798	junction_1	31517.27378971415	NA	2	NA	TRUE	NA	NA	NA	C	coding	638	1917	92	2008	15.0	-22	False	AATAAA	-18
PB.4702.1	chr17	-	2525	6	novel_not_in_catalog	SCIMP	novel	2383	5	NA	NA	15	1780	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	76115.8144477217	NA	6	NA	TRUE	NA	NA	NA	C	coding	145	438	91	528	35.0	-28	True	NA	NA
PB.5608.6	chr19	+	2968	11	incomplete-splice_match	NCLN	ENST00000587740.5	1210	12	-26	-2	-26	2	intron_retention	FALSE	canonical	1	402713	junction_7	200745.46604157714	NA	6	NA	TRUE	NA	NA	NA	C	coding	208	627	453	1079	5.0	NA	False	AATAAA	-23
PB.7029.11	chr2	-	3057	13	novel_in_catalog	DNPEP	novel	2408	15	NA	NA	5	0	intron_retention	FALSE	canonical	1	349876	junction_12	166879.26073437047	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	161	964	15.0	-18	True	ATTAAA	-15
PB.5608.4	chr19	+	3674	15	full-splice_match	NCLN	ENST00000246117.8	4005	15	332	-1	-4	0	multi-exon	FALSE	canonical	1	399515	junction_1	194538.8784787645	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	100	1791	10.0	1	True	AATAAA	-17
PB.5608.2	chr19	+	2136	15	full-splice_match	NCLN	ENST00000246117.8	4005	15	330	1539	-6	175	multi-exon	FALSE	canonical	1	399515	junction_1	194538.8784787645	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	102	1793	5.0	-1	True	ATTAAA	-16
PB.5608.3	chr19	+	2189	16	novel_in_catalog	NCLN	novel	2070	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	2678	junction_15	246494.93108174772	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	102	1793	10.0	-1	True	AATAAA	-17
PB.4702.8	chr17	-	2188	5	full-splice_match	SCIMP	ENST00000574081.5	2383	5	3	192	3	-192	multi-exon	FALSE	canonical	1	143834	junction_3	28591.404157324978	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	103	540	80.0	-40	True	NA	NA
PB.4702.9	chr17	-	2170	5	full-splice_match	SCIMP	ENST00000399600.8	1173	5	0	-997	0	-192	multi-exon	FALSE	canonical	1	56047	junction_3	61773.98652143149	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	106	522	80.0	-43	True	NA	NA
PB.11209.1	chr8	-	3543	10	full-splice_match	IMPA1	ENST00000449740.6	1180	10	-17	-2346	1	1045	multi-exon	FALSE	canonical	1	11676	junction_9	119301.80234934621	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	98	1108	30.0	24	True	CATAAA	-20
PB.10668.6	chr7	-	3208	18	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	3	-68236	no_combination_of_known_junctions	FALSE	canonical	1	990	junction_17	92695.88391491915	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2211	272	2482	45.0	-8	True	AATAAA	-27
PB.7029.13	chr2	-	1660	15	full-splice_match	DNPEP	ENST00000373963.5	1657	15	-5	2	-2	-1	multi-exon	FALSE	canonical	1	75252	junction_13	218183.02735342897	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	268	1566	15.0	-28	True	ATTAAA	-14
PB.7127.2	chr20	-	1697	14	novel_in_catalog	CSNK2A1	novel	12912	13	NA	NA	0	-5	no_combination_of_known_junctions	FALSE	canonical	1	76	junction_12	94306.66203528087	NA	3	NA	TRUE	NA	NA	NA	C	coding	391	1176	198	1373	60.0	-1	True	NA	NA
PB.3501.10	chr14	+	3331	9	novel_in_catalog	CHURC1-FNTB	novel	1847	13	NA	NA	91439	847	no_combination_of_known_junctions	FALSE	canonical	1	364	junction_1	62078.3030442954	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	1256	1993	15.0	-148	False	AATAAA	-15
PB.7127.1	chr20	-	2887	14	full-splice_match	CSNK2A1	ENST00000643660.1	2822	14	-58	-7	0	-3	multi-exon	FALSE	canonical	1	76	junction_12	93297.3178414169	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	229	1404	25.0	-1	True	NA	NA
PB.7127.6	chr20	-	4194	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	97	8621	0	6	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	177	1352	45.0	20	True	AATAAA	-8
PB.7127.7	chr20	-	4345	14	full-splice_match	CSNK2A1	ENST00000217244.8	4390	14	72	-27	-1	12	multi-exon	FALSE	canonical	1	76	junction_11	76517.77907915977	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	307	1482	25.0	7	True	AATAAA	-29
PB.2262.2	chr11	+	3820	20	full-splice_match	CUL5	ENST00000531427.5	3596	20	-403	179	-63	-179	multi-exon	FALSE	canonical	1	9342	junction_19	61715.19228119369	NA	2	NA	TRUE	NA	NA	NA	C	coding	780	2343	493	2835	90.0	-480	False	NA	NA
PB.10668.3	chr7	-	3984	19	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	-17	-67645	no_combination_of_known_junctions	FALSE	canonical	1	10341	junction_18	88730.7072402673	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2211	457	2667	50.0	-28	True	AATAAA	-13
PB.7054.1	chr2	-	2383	18	full-splice_match	SP110	ENST00000358662.8	2337	18	-41	-5	-3	1	multi-exon	FALSE	canonical	1	7965	junction_2	156848.2018457407	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	121	2190	80.0	-18	True	TTTAAA	-18
PB.7054.3	chr2	-	2515	20	novel_in_catalog	SP110	novel	2725	3	NA	NA	95	0	combination_of_known_junctions	FALSE	canonical	1	15456	junction_18	174599.27484966168	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	85.0	1	True	TTTAAA	-17
PB.9666.9	chr5	-	1963	14	full-splice_match	HNRNPH1	ENST00000442819.6	2248	14	48	237	-2	103	multi-exon	FALSE	canonical	1	1091551	junction_13	1048742.8546154592	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	70	1419	20.0	-4	True	ATTAAA	-16
PB.7054.5	chr2	-	2222	17	novel_in_catalog	SP110	novel	2725	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26645	junction_1	147792.8320978389	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	102	2030	85.0	1	True	TTTAAA	-17
PB.7054.4	chr2	-	2453	19	full-splice_match	SP110	ENST00000258381.10	2426	19	-41	14	-2	0	multi-exon	FALSE	canonical	1	28630	junction_2	161530.44926733218	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	120	2261	85.0	-17	True	TTTAAA	-17
PB.7054.7	chr2	-	3275	14	incomplete-splice_match	SP110	ENST00000358662.8	2337	18	-29	7025	-7	512	3prime_fragment	FALSE	canonical	1	237166	junction_6	87916.37462636745	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	109	1707	80.0	-6	True	NA	NA
PB.7054.6	chr2	-	2299	18	novel_in_catalog	SP110	novel	2725	3	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	19972	junction_10	173626.21718069396	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	117	2108	80.0	-14	True	TTTAAA	-16
PB.5553.1	chr19	+	2149	1	incomplete-splice_match	ARID3A	ENST00000263620.7	5941	9	47545	204	6795	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	217	654	966	1619	90.0	-9994	False	NA	NA
PB.7054.8	chr2	-	2745	14	incomplete-splice_match	SP110	ENST00000358662.8	2337	18	-38	7564	0	-25	3prime_fragment	FALSE	canonical	1	237166	junction_6	87916.37462636745	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	118	1716	75.0	-15	True	AAAACA	-45
PB.3659.6	chr14	+	2598	11	full-splice_match	CCNK	ENST00000389879.9	3524	11	1	925	1	1	multi-exon	FALSE	canonical	1	432438	junction_1	161770.03181924642	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	123	1865	5.0	-7	True	AATAAA	-17
PB.3659.7	chr14	+	2207	11	full-splice_match	CCNK	ENST00000389879.9	3524	11	1	1316	1	-390	multi-exon	FALSE	canonical	1	432438	junction_1	161770.03181924642	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	123	1865	30.0	-7	True	AATAAA	-29
PB.3659.4	chr14	+	2532	11	novel_in_catalog	CCNK	novel	955	7	NA	NA	0	-201	combination_of_known_junctions	FALSE	canonical	1	81107	junction_1	225590.3716090073	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	259	2001	10.0	-8	True	ATTAAA	-23
PB.3659.5	chr14	+	2732	11	novel_in_catalog	CCNK	novel	955	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	81107	junction_1	225590.3716090073	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	258	2000	10.0	-7	True	AATAAA	-16
PB.3659.2	chr14	+	2548	10	novel_in_catalog	CCNK	novel	955	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	6546	junction_5	259638.71215599705	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	704	1816	10.0	-16	True	AATAAA	-16
PB.3659.3	chr14	+	2405	11	full-splice_match	CCNK	ENST00000389879.9	3524	11	-8	1127	-8	-201	multi-exon	FALSE	canonical	1	432438	junction_1	161770.03181924642	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	132	1874	10.0	-16	True	ATTAAA	-23
PB.8838.16	chr4	+	4056	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	121	1416	-12	-1416	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	81	1370	65.0	-16	True	NA	NA
PB.3659.1	chr14	+	2980	12	novel_in_catalog	CCNK	novel	955	7	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	4047	junction_1	284809.3581567377	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	507	2249	10.0	-16	True	AATAAA	-15
PB.3659.8	chr14	+	3221	11	full-splice_match	CCNK	ENST00000389879.9	3524	11	3	300	0	-300	multi-exon	FALSE	canonical	1	432438	junction_1	161770.03181924642	NA	2	NA	TRUE	NA	NA	NA	C	coding	580	1743	121	1863	35.0	-5	True	ACTAAA	-28
PB.3659.9	chr14	+	3080	10	novel_in_catalog	CCNK	novel	955	7	NA	NA	0	1	intron_retention	FALSE	canonical	1	432438	junction_1	169433.11126733286	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	1154	2347	5.0	-5	True	AATAAA	-17
PB.2154.7	chr11	-	2830	5	full-splice_match	RAB6A	ENST00000541588.5	758	5	-72	-2000	-9	2	multi-exon	FALSE	canonical	1	9376	junction_2	214627.04054883207	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	512	826	25.0	-73	True	AATAAA	-18
PB.2154.6	chr11	-	3040	9	novel_not_in_catalog	RAB6A	novel	3389	8	NA	NA	-5	2	intron_retention	TRUE	canonical	1	1924	junction_8	199547.4384986171	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	410	1036	25.0	-69	True	AATAAA	-18
PB.2154.5	chr11	-	3071	7	novel_in_catalog	RAB6A	novel	3389	8	NA	NA	-5	2	intron_retention	FALSE	canonical	1	13252	junction_1	139492.38178770035	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	508	1005	25.0	-69	True	AATAAA	-18
PB.850.2	chr1	-	3481	7	full-splice_match	PEX19	ENST00000472750.5	3504	7	13	10	0	-10	multi-exon	FALSE	canonical	1	111009	junction_6	219929.61330136715	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	178	807	25.0	-9	True	ATTAAA	-11
PB.2154.3	chr11	-	3223	8	full-splice_match	RAB6A	ENST00000310653.10	3389	8	36	130	-10	128	multi-exon	FALSE	canonical	1	124634	junction_4	147084.1725891841	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	467	1093	20.0	-28	True	AAGAAA	-23
PB.2154.2	chr11	-	3401	9	novel_not_in_catalog	RAB6A	novel	3389	8	NA	NA	5	-33	intron_retention	FALSE	canonical	1	5543	junction_3	230992.44505705702	NA	11	1	TRUE	NA	NA	NA	C	coding	179	540	452	991	75.0	-13	True	AATAAA	-16
PB.10059.1	chr6	-	2563	2	novel_not_in_catalog	OOEP	novel	1007	4	NA	NA	-36	-19203	intron_retention	FALSE	canonical	1	556	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-10	True	AATAAA	-21
PB.850.6	chr1	-	3386	6	novel_in_catalog	AL139011.2	novel	2587	16	NA	NA	-3	-36736	intron_retention	FALSE	canonical	1	7217	junction_4	263296.34679167124	NA	14	1	TRUE	NA	NA	NA	B	coding	152	459	255	713	25.0	-1	True	ATTAAA	-10
PB.850.9	chr1	-	2262	8	full-splice_match	PEX19	ENST00000368072.9	3661	8	5	1394	0	-904	multi-exon	FALSE	canonical	1	459830	junction_6	108256.63218840456	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	18	917	20.0	-9	True	AATATA	-19
PB.850.8	chr1	-	2653	8	full-splice_match	PEX19	ENST00000368072.9	3661	8	5	1003	0	-513	multi-exon	FALSE	canonical	1	459830	junction_6	108256.63218840456	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	18	917	20.0	-9	True	AATACA	-21
PB.782.1	chr1	-	1258	5	full-splice_match	PMVK	ENST00000368467.3	1280	5	21	1	21	-1	multi-exon	FALSE	canonical	1	683313	junction_4	75032.97411263597	NA	1	NA	TRUE	NA	NA	NA	A	coding	192	579	286	864	15.0	-4	True	AATAAA	-20
PB.1969.1	chr11	-	1710	2	antisense	novelGene_AP003721.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5884	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-58	False	NA	NA
PB.11209.2	chr8	-	3370	9	full-splice_match	IMPA1	ENST00000256108.9	2690	9	365	-1045	0	1045	multi-exon	FALSE	canonical	1	195135	junction_8	55277.107326264595	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	102	935	30.0	-4	True	CATAAA	-20
PB.8410.1	chr3	-	4826	9	novel_not_in_catalog	RAB6B	novel	5526	8	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_1	85586.52494323727	NA	2	1	TRUE	NA	NA	NA	C	coding	208	627	394	1020	35.0	-6	True	AATAAA	-15
PB.961.3	chr1	-	2886	1	incomplete-splice_match	ABL2	ENST00000502732.5	12144	12	124684	2705	38127	2016	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.194.1	chr1	+	767	3	full-splice_match	SH3BGRL3	ENST00000270792.9	1661	3	893	1	-53	-1	multi-exon	FALSE	canonical	1	4853683	junction_1	1191032.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	93	282	88	369	5.0	-30	True	ATTAAA	-21
PB.2769.19	chr12	-	4340	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1133	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	3	842	30.0	-1	True	AATAAA	-16
PB.2769.18	chr12	-	4358	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1133	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	285	858	3	860	30.0	-1	True	AATAAA	-16
PB.2769.15	chr12	-	4530	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	1202	9	-1202	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	20.0	-1	True	NA	NA
PB.2769.14	chr12	-	4767	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	965	9	-965	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	35.0	-1	True	AGTAAA	-16
PB.2769.17	chr12	-	4554	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	8	-1133	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	5	1	TRUE	NA	NA	NA	C	coding	351	1056	1	1056	30.0	-2	True	AATAAA	-16
PB.928.1	chr1	+	2577	5	full-splice_match	GORAB	ENST00000367763.7	2189	5	0	-388	0	388	multi-exon	FALSE	canonical	1	55791	junction_2	35490.91746049262	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	21	1205	20.0	-305	False	AATAAA	-14
PB.2769.11	chr12	-	5150	2	full-splice_match	PHLDA1	ENST00000619060.1	5913	2	45	718	45	-718	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	260	783	414	1196	50.0	826	False	AATAAA	-24
PB.2769.13	chr12	-	4755	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-718	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	3	842	50.0	-1	True	AATAAA	-24
PB.1975.9	chr11	-	3814	9	novel_in_catalog	CPSF7	novel	3695	10	NA	NA	4	0	intron_retention	FALSE	canonical	1	263040	junction_4	127416.05806415994	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	127	1068	25.0	29	False	AATAAA	-16
PB.10978.4	chr8	+	4411	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	-2	5211	-2	99	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	0	NA	TRUE	NA	NA	NA	C	coding	1327	3984	29	4012	25.0	-2	True	AATATA	-14
PB.7150.5	chr20	+	3984	24	novel_in_catalog	ATRN	novel	8633	29	NA	NA	-12	97	no_combination_of_known_junctions	FALSE	canonical	1	3562	junction_2	77754.17682688478	NA	0	NA	TRUE	NA	NA	NA	C	coding	1234	3705	81	3785	95.0	-11	True	NA	NA
PB.1975.5	chr11	-	4671	8	novel_in_catalog	CPSF7	novel	3695	10	NA	NA	-1	9	intron_retention	FALSE	canonical	1	220166	junction_4	146363.9867467683	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	2213	2683	15.0	24	False	AATAAA	-25
PB.1975.4	chr11	-	3593	11	novel_in_catalog	CPSF7	novel	3695	10	NA	NA	9	12	intron_retention	TRUE	canonical	1	26928	junction_7	232110.3235598322	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	889	1602	10.0	8	False	AATAAA	-28
PB.1975.7	chr11	-	3614	11	novel_in_catalog	CPSF7	novel	3695	10	NA	NA	-4	7	intron_retention	FALSE	canonical	1	11639	junction_8	238135.78354058845	NA	2	1	TRUE	NA	NA	NA	C	coding	381	1146	483	1628	20.0	17	False	AATAAA	-23
PB.7066.1	chr2	-	3279	1	antisense	novelGene_AC017104.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	108	327	1468	1794	100.0	-14	True	NA	NA
PB.1975.1	chr11	-	3510	10	full-splice_match	CPSF7	ENST00000394888.8	3650	10	66	74	3	8	multi-exon	FALSE	canonical	1	220166	junction_5	131822.10652576026	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	108	1523	20.0	-18	True	AATAAA	-24
PB.7150.6	chr20	+	3716	25	full-splice_match	ATRN	ENST00000446916.2	3921	25	302	-97	302	97	multi-exon	FALSE	canonical	1	115410	junction_1	58024.1650230597	NA	0	NA	TRUE	NA	NA	NA	C	coding	1103	3312	206	3517	95.0	319	False	NA	NA
PB.1975.3	chr11	-	3291	11	novel_in_catalog	CPSF7	novel	3695	10	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	1	25965	junction_5	192923.5038838192	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	120	1307	20.0	-30	True	AATAAA	-21
PB.1975.2	chr11	-	3510	10	full-splice_match	CPSF7	ENST00000439958.7	3524	10	20	-6	-2	6	multi-exon	FALSE	canonical	1	263040	junction_5	120493.26740107787	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	137	1525	20.0	19	False	AATAAA	-22
PB.11251.1	chr8	-	2700	8	full-splice_match	MTERF3	ENST00000287025.3	1409	8	-18	-1273	3	1236	multi-exon	FALSE	canonical	1	166696	junction_7	56833.31471909046	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	118	1371	15.0	0	True	AATAAA	-37
PB.8170.6	chr3	+	2049	14	novel_not_in_catalog	GNL3	novel	547	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	4241	junction_7	527909.178098987	NA	1	1	TRUE	NA	NA	NA	C	coding	236	711	89	799	45.0	-27	True	AATAAA	-19
PB.8125.1	chr3	-	4802	20	novel_in_catalog	MST1R	novel	4536	20	NA	NA	-21	6	combination_of_known_junctions	FALSE	canonical	1	14853	junction_11	20302.003791364987	NA	0	NA	TRUE	NA	NA	NA	A	coding	1401	4206	286	4491	50.0	2217	False	NA	NA
PB.8689.5	chr4	+	5085	15	novel_in_catalog	TBC1D14	novel	663	2	NA	NA	-56	-1	combination_of_known_junctions	FALSE	canonical	1	6521	junction_9	172422.0822040986	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	181	2364	20.0	-37	True	AATAAA	-19
PB.1239.2	chr1	+	2178	3	full-splice_match	COX20	ENST00000391839.6	1005	3	1	-1174	1	-3	multi-exon	FALSE	canonical	1	314679	junction_2	42663.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-5	True	NA	NA
PB.8913.1	chr4	-	1686	12	full-splice_match	PPA2	ENST00000341695.9	1684	12	8	-10	-6	10	multi-exon	TRUE	canonical	1	580661	junction_11	142789.22712061467	NA	4	NA	TRUE	NA	NA	NA	C	coding	334	1005	24	1028	30.0	-15	True	AATAAA	-28
PB.7150.1	chr20	+	6990	29	full-splice_match	ATRN	ENST00000262919.9	8633	29	-71	1714	-71	-1714	multi-exon	FALSE	canonical	1	114379	junction_25	76019.22406865253	NA	3	NA	TRUE	NA	NA	NA	C	coding	1429	4290	140	4429	20.0	-4	True	ATTAAA	-23
PB.799.3	chr1	-	1544	9	full-splice_match	SCAMP3	ENST00000302631.7	1446	9	-101	3	-21	-1	multi-exon	FALSE	canonical	1	699240	junction_7	143287.05557703914	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	210	1253	20.0	-1	True	AATAAA	-22
PB.7150.2	chr20	+	3903	20	incomplete-splice_match	ATRN	ENST00000446916.2	3921	25	-139	21027	-71	-21027	3prime_fragment	FALSE	canonical	1	115410	junction_1	57944.192663443704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1139	3420	140	3559	15.0	-4	True	NA	NA
PB.6460.9	chr2	+	5191	5	novel_in_catalog	FOXN2	novel	932	5	NA	NA	-33	-7	intron_retention	FALSE	canonical	1	1981	junction_2	53957.65917365208	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	153	761	10.0	-5	True	AATAAA	-11
PB.6460.8	chr2	+	5362	7	full-splice_match	FOXN2	ENST00000340553.7	5408	7	46	0	46	0	multi-exon	FALSE	canonical	1	34617	junction_1	49986.45950988461	NA	4	NA	TRUE	NA	NA	NA	C	coding	431	1296	216	1511	5.0	-2871	False	AATAAA	-18
PB.6460.7	chr2	+	5552	8	novel_not_in_catalog	FOXN2	novel	932	5	NA	NA	30	-6	intron_retention	FALSE	canonical	1	3722	junction_3	67382.79359005531	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	412	1707	10.0	-15	True	AATAAA	-12
PB.6460.6	chr2	+	5633	8	novel_not_in_catalog	FOXN2	novel	932	5	NA	NA	30	0	intron_retention	FALSE	canonical	1	1305	junction_2	67120.70628140235	NA	4	NA	TRUE	NA	NA	NA	C	coding	431	1296	487	1782	5.0	-15	True	AATAAA	-18
PB.6460.5	chr2	+	4953	6	novel_in_catalog	FOXN2	novel	932	5	NA	NA	16	-370	intron_retention	FALSE	canonical	1	89572	junction_1	27060.18283308522	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	177	1472	30.0	-29	True	ATTAAA	-21
PB.6460.4	chr2	+	4368	3	novel_in_catalog	FOXN2	novel	932	5	NA	NA	-1	-255	no_combination_of_known_junctions	FALSE	canonical	1	696	junction_1	62656.0	NA	23	NA	TRUE	NA	NA	NA	C	coding	188	567	206	772	20.0	-2991	False	AATGAA	-39
PB.6460.3	chr2	+	4789	5	novel_in_catalog	FOXN2	novel	932	5	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	1592	junction_1	59866.398023014546	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	372	938	5.0	-2991	False	AATAAA	-18
PB.6460.2	chr2	+	5534	7	novel_not_in_catalog	FOXN2	novel	932	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	556	junction_1	59566.22039774071	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	389	1684	5.0	-3000	False	AATAAA	-17
PB.6460.1	chr2	+	5272	6	novel_in_catalog	FOXN2	novel	932	5	NA	NA	-5	1	intron_retention	FALSE	canonical	1	89572	junction_1	27060.18283308522	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	125	1420	5.0	23	True	AATAAA	-19
PB.1511.3	chr10	-	2730	2	incomplete-splice_match	ADIRF-AS1	ENST00000418273.2	2627	3	37	1	37	0	intron_retention	FALSE	canonical	1	7244	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	561	1073	15.0	3341	False	NA	NA
PB.1511.2	chr10	-	5528	1	full-splice_match	ADIRF-AS1	ENST00000609170.1	2205	1	-3718	395	44	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	170	513	554	1066	20.0	3348	False	NA	NA
PB.1511.1	chr10	-	3066	2	incomplete-splice_match	ADIRF-AS1	ENST00000418273.2	2627	3	101	-399	101	4	intron_retention	FALSE	canonical	1	7244	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	170	513	497	1009	95.0	-1	True	NA	NA
PB.11251.6	chr8	-	4391	7	novel_not_in_catalog	MTERF3	novel	1529	9	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	3643	junction_6	114640.97329731441	NA	11	NA	TRUE	NA	NA	NA	C	coding	296	891	3435	4325	25.0	11	True	AATAAA	-13
PB.1162.11	chr1	-	2968	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	39	1394	30.0	-8	True	NA	NA
PB.1162.13	chr1	-	3550	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-34	-106	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	54	1409	35.0	-23	True	NA	NA
PB.1162.12	chr1	-	3034	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-12	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	104374.27022411379	NA	7	1	TRUE	NA	NA	NA	C	coding	451	1356	32	1387	35.0	-1	True	NA	NA
PB.1162.14	chr1	-	1509	7	full-splice_match	SDE2	ENST00000272091.7	3975	7	-20	2486	-20	-2486	multi-exon	FALSE	canonical	1	199809	junction_6	44934.079403116244	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	40	1395	25.0	-9	True	ATTAAA	-21
PB.799.2	chr1	-	1465	8	full-splice_match	SCAMP3	ENST00000355379.3	1537	8	73	-1	-18	-1	multi-exon	FALSE	canonical	1	215147	junction_7	297749.47580556676	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	207	1172	15.0	2	True	AATAAA	-24
PB.7842.1	chr22	-	2627	16	full-splice_match	ARFGAP3	ENST00000263245.9	2857	16	129	101	-5	-101	multi-exon	FALSE	canonical	1	295464	junction_15	98112.86909708747	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	92	1642	35.0	-40	True	AGTAAA	-39
PB.3397.1	chr14	+	1063	9	full-splice_match	PNN	ENST00000216832.8	3576	9	-8	2521	-8	-4	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	987	76	1062	50.0	5	True	NA	NA
PB.10378.2	chr7	-	3647	15	novel_not_in_catalog	RADIL	novel	5669	15	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	3453	junction_1	11494.865817762615	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	186	3467	10.0	-10	True	AATAAA	-18
PB.10378.1	chr7	-	3676	15	full-splice_match	RADIL	ENST00000399583.3	3689	15	12	1	12	-1	multi-exon	TRUE	canonical	1	10820	junction_14	11422.684463248504	NA	0	NA	TRUE	NA	NA	NA	C	coding	1075	3228	177	3404	10.0	-1	True	AATAAA	-18
PB.1174.3	chr1	-	2835	5	novel_in_catalog	JMJD4	novel	3749	2	NA	NA	-18	-1	intron_retention	TRUE	canonical	1	228562	junction_4	46595.767760468334	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	29	964	30.0	-19	True	NA	NA
PB.7464.4	chr21	+	2982	8	full-splice_match	CXADR	ENST00000400169.1	1445	8	-113	-1424	-29	1424	multi-exon	FALSE	canonical	1	29889	junction_2	30671.020950115908	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	114	1172	85.0	-26	True	NA	NA
PB.11508.10	chr9	-	1646	9	full-splice_match	DCAF12	ENST00000361264.8	3667	9	89	1932	89	1093	multi-exon	FALSE	canonical	1	502500	junction_8	171037.77069097193	NA	12	NA	TRUE	NA	NA	NA	C	coding	453	1362	254	1615	20.0	0	True	NA	NA
PB.7464.1	chr21	+	2472	7	full-splice_match	CXADR	ENST00000284878.11	6254	7	628	3154	-36	1094	multi-exon	FALSE	canonical	1	29889	junction_2	32881.22848179827	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	121	1218	90.0	-33	True	AAAAAG	-34
PB.7464.2	chr21	+	4392	8	full-splice_match	CXADR	ENST00000400169.1	1445	8	-139	-2808	-55	2808	multi-exon	FALSE	canonical	1	29889	junction_2	30671.020950115908	NA	5	NA	TRUE	NA	NA	NA	C	coding	352	1059	140	1198	25.0	-132	False	NA	NA
PB.7464.3	chr21	+	2216	5	full-splice_match	CXADR	ENST00000400166.5	1080	5	-42	-1094	-42	1094	multi-exon	TRUE	canonical	1	22759	junction_4	42959.98927490555	NA	5	NA	TRUE	NA	NA	NA	C	coding	252	759	127	885	90.0	-39	True	AAAAAG	-34
PB.9906.15	chr6	-	3982	1	novel_in_catalog	TAP1	novel	2959	11	NA	NA	88	-4072	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	219	660	93	752	5.0	-30	True	NA	NA
PB.3397.2	chr14	+	3054	2	novel_not_in_catalog	PNN	novel	656	6	NA	NA	-1	-522	intron_retention	FALSE	canonical	1	32	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-25	True	NA	NA
PB.9906.13	chr6	-	2516	10	novel_in_catalog	TAP1	novel	2542	5	NA	NA	73	-2	no_combination_of_known_junctions	FALSE	canonical	1	5373	junction_7	353271.16625743586	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	1021	2148	10.0	-45	True	AATAAA	-13
PB.9906.12	chr6	-	2618	11	novel_not_in_catalog	TAP1	novel	2542	5	NA	NA	79	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	341266.7789144001	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	102	1442	10.0	-39	True	AATAAA	-13
PB.9906.11	chr6	-	2806	12	novel_not_in_catalog	TAP1	novel	2542	5	NA	NA	84	-2	any annotated donor/acceptor	FALSE	canonical	1	3634	junction_2	413288.99640462303	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	97	2586	10.0	-34	True	AATAAA	-13
PB.9906.10	chr6	-	4341	9	novel_in_catalog	TAP1	novel	2542	5	NA	NA	81	-2	intron_retention	FALSE	canonical	1	820136	junction_8	134858.42242184718	NA	3	1	TRUE	NA	NA	NA	C	coding	329	990	2984	3973	10.0	-37	True	AATAAA	-13
PB.4520.4	chr16	+	5063	15	full-splice_match	NFAT5	ENST00000393742.6	13067	15	-233	8237	9	-149	multi-exon	FALSE	canonical	1	35681	junction_2	44143.96355918083	NA	0	NA	TRUE	NA	NA	NA	C	coding	1455	4368	618	4985	80.0	9	True	NA	NA
PB.11554.1	chr9	-	3022	15	novel_not_in_catalog	ANKRD18A	novel	2906	8	NA	NA	71	-6509	any annotated donor/acceptor	FALSE	canonical	1	2396	junction_8	13723.74826454389	NA	4	NA	TRUE	NA	NA	NA	B	coding	906	2718	305	3022	30.0	-1	True	AATAGA	-26
PB.11554.2	chr9	-	3264	11	novel_not_in_catalog	ANKRD18A	novel	2906	8	NA	NA	90	6619	any annotated donor/acceptor	FALSE	canonical	1	2396	junction_4	16004.700898173636	NA	2	NA	TRUE	NA	NA	NA	B	coding	710	2133	286	2418	55.0	18	True	AATAAA	-17
PB.11554.3	chr9	-	2500	11	novel_not_in_catalog	ANKRD18A	novel	2906	8	NA	NA	25	5790	any annotated donor/acceptor	FALSE	canonical	1	2396	junction_4	16004.700898173636	NA	0	NA	TRUE	NA	NA	NA	B	coding	710	2133	351	2483	30.0	1876	False	AATAAA	-17
PB.4520.1	chr16	+	5126	16	full-splice_match	NFAT5	ENST00000349945.5	13362	16	0	8236	0	-149	multi-exon	TRUE	canonical	1	29405	junction_2	50149.094869598586	NA	8	2	TRUE	NA	NA	NA	C	coding	1455	4368	681	5048	80.0	0	True	NA	NA
PB.4520.2	chr16	+	5006	14	full-splice_match	NFAT5	ENST00000354436.6	13229	14	-14	8237	4	-149	multi-exon	FALSE	canonical	1	44931	junction_2	42391.985050068215	NA	1	NA	TRUE	NA	NA	NA	C	coding	1531	4596	333	4928	80.0	4	True	NA	NA
PB.4520.3	chr16	+	6029	14	novel_in_catalog	NFAT5	novel	14219	16	NA	NA	9	-22	combination_of_known_junctions	FALSE	canonical	1	44931	junction_2	46356.909718773924	NA	1	NA	TRUE	NA	NA	NA	C	coding	1530	4593	328	4920	75.0	9	True	TATAAA	-9
PB.10343.1	chr6	+	3255	16	novel_not_in_catalog	ERMARD	novel	551	6	NA	NA	0	-7	intron_retention	FALSE	canonical	1	5019	junction_12	71406.83237400248	NA	29	3	TRUE	NA	NA	NA	C	coding	297	894	1735	2628	40.0	0	True	AGTAAA	-9
PB.8539.10	chr3	+	1570	12	full-splice_match	TTC14	ENST00000296015.8	2881	12	59	1252	0	-277	multi-exon	FALSE	canonical	1	100836	junction_11	68854.07274989573	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1497	74	1570	65.0	-10	True	NA	NA
PB.8920.1	chr4	+	6141	7	full-splice_match	SGMS2	ENST00000394684.8	6149	7	0	8	0	-8	multi-exon	FALSE	canonical	1	24811	junction_1	32610.618916832733	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	558	1655	40.0	0	True	AATAAA	-26
PB.6001.18	chr19	-	2129	14	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	327696.1204470859	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	269	1636	20.0	75	False	AATAAA	-12
PB.6001.19	chr19	-	1971	6	incomplete-splice_match	AKT2	ENST00000424901.5	5170	13	33	10488	11	-15	3prime_fragment	FALSE	canonical	1	343874	junction_5	226465.08949999337	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	267	968	80.0	77	False	NA	NA
PB.6001.16	chr19	-	2350	15	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	13	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	320089.27389004163	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	234	1679	20.0	15	True	AATAAA	-14
PB.9421.6	chr5	+	2974	11	full-splice_match	LMNB1	ENST00000261366.9	2878	11	4	-100	-1	100	multi-exon	FALSE	canonical	1	664182	junction_1	147664.127379672	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	358	2118	15.0	-8	True	GATAAA	-25
PB.6001.14	chr19	-	3259	14	novel_in_catalog	AKT2	novel	5300	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	911	junction_4	329350.9809009264	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	258	1253	20.0	-9	True	AATAAA	-15
PB.4524.7	chr16	+	4495	24	full-splice_match	WWP2	ENST00000359154.6	4515	24	20	0	-2	0	multi-exon	FALSE	canonical	1	80197	junction_1	74825.6185444753	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	82	2694	5.0	-6	True	AATAAA	-16
PB.6001.12	chr19	-	2161	14	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	8	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	327696.1204470859	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	270	1892	20.0	74	False	AATAAA	-18
PB.9421.2	chr5	+	2376	11	full-splice_match	LMNB1	ENST00000261366.9	2878	11	-70	572	-70	-123	multi-exon	FALSE	canonical	1	664182	junction_1	147664.127379672	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	432	2192	30.0	3	True	AAGAAA	-13
PB.6001.10	chr19	-	2545	16	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	-14	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	379710.87581735424	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	261	1706	20.0	-12	True	AATAAA	-18
PB.6001.11	chr19	-	2362	15	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	12	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	320089.27389004163	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	266	1711	20.0	-17	True	AATAAA	-18
PB.395.3	chr1	-	3213	4	intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	376	junction_2	1754.419752130791	NA	20	2	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	27	True	AATAAA	-19
PB.8097.7	chr3	-	2681	12	novel_not_in_catalog	PRKAR2A	novel	448	3	NA	NA	1	148	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	109215.83808417968	NA	3	1	TRUE	NA	NA	NA	C	coding	404	1215	237	1451	80.0	-29	True	NA	NA
PB.395.1	chr1	-	5560	1	full-splice_match	FOXD2-AS1	ENST00000445551.1	2509	1	-3054	3	-3054	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	107	324	2458	2781	25.0	-1	True	AATAAA	-21
PB.8097.6	chr3	-	3086	12	novel_not_in_catalog	PRKAR2A	novel	448	3	NA	NA	-2	483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	109215.83808417968	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	211	1425	15.0	-3	True	ATTAAA	-18
PB.10343.5	chr6	+	3591	18	novel_in_catalog	ERMARD	novel	551	6	NA	NA	4	0	intron_retention	FALSE	canonical	1	15319	junction_1	57629.36299789589	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	1926	3584	30.0	4	True	AGTAAA	-20
PB.3210.1	chr13	-	2632	1	incomplete-splice_match	RBM26	ENST00000449987.6	3662	5	26747	10	26747	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	6275	False	AATAAA	-10
PB.9984.10	chr6	-	1868	1	novel_in_catalog	TFEB	novel	2354	10	NA	NA	-62	-40870	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	107	324	266	589	90.0	9467	False	NA	NA
PB.11550.6	chr9	-	2278	4	novel_not_in_catalog	AL138752.2	novel	2591	12	NA	NA	164571	-293481	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	47731.924469431935	NA	1	NA	TRUE	NA	NA	NA	B	coding	297	894	214	1107	5.0	10	True	AATAAA	-18
PB.4516.3	chr16	+	2731	11	full-splice_match	VPS4A	ENST00000254950.12	4100	11	0	1369	0	524	multi-exon	FALSE	canonical	1	684060	junction_1	128292.60152339262	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	157	1470	65.0	0	True	NA	NA
PB.4516.2	chr16	+	3525	10	novel_in_catalog	AC026464.4	novel	1284	10	NA	NA	11645	2346	intron_retention	FALSE	canonical	1	684060	junction_1	130945.98175734551	NA	0	NA	TRUE	NA	NA	NA	B	coding	364	1095	186	1280	20.0	4	True	AATAAA	-25
PB.4516.1	chr16	+	2207	11	full-splice_match	VPS4A	ENST00000254950.12	4100	11	0	1893	0	0	multi-exon	FALSE	canonical	1	684060	junction_1	128292.60152339262	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	157	1470	20.0	0	True	AATAAA	-25
PB.10343.7	chr6	+	3165	1	novel_in_catalog	ERMARD	novel	551	6	NA	NA	0	-853	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	13	True	NA	NA
PB.4516.5	chr16	+	2170	11	novel_not_in_catalog	AC026464.4	novel	1284	10	NA	NA	11678	2341	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	302651.5805783277	NA	0	NA	TRUE	NA	NA	NA	B	coding	336	1011	153	1163	25.0	4	True	AATAAA	-20
PB.4516.4	chr16	+	4010	11	full-splice_match	VPS4A	ENST00000254950.12	4100	11	1	89	1	-89	multi-exon	FALSE	canonical	1	684060	junction_1	128292.60152339262	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	156	1469	20.0	1	True	NA	NA
PB.362.4	chr1	+	5073	10	novel_in_catalog	DMAP1	novel	1545	11	NA	NA	6	-9	intron_retention	FALSE	canonical	1	10244	junction_1	163382.8178654485	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	4594	5019	10.0	-6	True	AATAGA	-14
PB.7662.1	chr22	+	1801	8	novel_not_in_catalog	UPB1	novel	3154	9	NA	NA	8133	-1	any annotated donor/acceptor	FALSE	canonical	1	10231	junction_1	14579.339127263454	NA	0	NA	TRUE	NA	NA	NA	A	coding	299	900	112	1011	10.0	-8899	False	NA	NA
PB.31.13	chr1	-	3023	13	novel_in_catalog	GNB1	novel	3145	11	NA	NA	-39	-3	combination_of_known_junctions	FALSE	canonical	1	964	junction_12	1511238.5985504847	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	227	1249	15.0	1313	False	AATAAA	-16
PB.145.9	chr1	-	6986	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-1	4	intron_retention	FALSE	canonical	1	222513	junction_11	343630.6956847859	NA	3	NA	TRUE	NA	NA	NA	C	coding	393	1182	3686	4867	25.0	-7	True	AATAAA	-20
PB.3960.19	chr15	-	2312	11	novel_in_catalog	PKM	novel	3016	3	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	1700639	junction_3	5125349.483320524	NA	5	NA	TRUE	NA	NA	NA	C	coding	531	1596	100	1695	5.0	-12	True	AATAAA	-13
PB.878.2	chr1	+	1768	2	incomplete-splice_match	FCGR2A	ENST00000459885.1	259	3	-145	405	-145	-6	3prime_fragment	FALSE	canonical	1	454726	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-4966	False	AATAAA	-10
PB.878.1	chr1	+	1774	3	full-splice_match	FCGR2A	ENST00000461298.1	805	3	3	-972	3	-6	multi-exon	FALSE	canonical	1	3334	junction_1	225696.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-5339	False	AATAAA	-10
PB.31.12	chr1	-	3081	13	novel_not_in_catalog	GNB1	novel	3145	11	NA	NA	-35	-3	any annotated donor/acceptor	FALSE	canonical	1	4075	junction_12	1503395.161356369	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	285	1307	15.0	1317	False	AATAAA	-16
PB.11355.1	chr8	-	4414	1	incomplete-splice_match	AGO2	ENST00000220592.9	14581	19	111049	1	8136	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2041	False	AATAAA	-16
PB.749.1	chr1	+	1676	4	novel_in_catalog	PSMB4	novel	964	7	NA	NA	2	-4	intron_retention	FALSE	canonical	1	4241818	junction_1	923629.3492757556	NA	0	NA	TRUE	NA	NA	NA	A	coding	167	504	27	530	25.0	-11	True	AATAAA	-7
PB.3960.11	chr15	-	2214	10	novel_in_catalog	PKM	novel	3016	3	NA	NA	-41	0	no_combination_of_known_junctions	FALSE	canonical	1	15780	junction_2	5075009.897371238	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	165	1448	0.0	6284	False	AATAAA	-17
PB.3960.10	chr15	-	2438	13	novel_not_in_catalog	PKM	novel	3016	3	NA	NA	44	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	5604041.943301824	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	222	1817	0.0	6208	False	AATAAA	-17
PB.3960.13	chr15	-	4854	12	novel_not_in_catalog	PKM	novel	3016	3	NA	NA	-12	0	intron_retention	FALSE	canonical	1	3476	junction_11	5991351.670534293	NA	1	1	TRUE	NA	NA	NA	C	coding	436	1311	275	1585	5.0	6152	False	AATAAA	-14
PB.11550.3	chr9	-	2799	4	novel_not_in_catalog	AL138752.2	novel	2591	12	NA	NA	164663	-270009	intron_retention	FALSE	canonical	1	3997	junction_1	36753.144872241886	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	7938	False	AATAAA	-15
PB.3960.17	chr15	-	2635	12	novel_in_catalog	PKM	novel	3016	3	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2196	junction_11	5383572.644680973	NA	3	NA	TRUE	NA	NA	NA	C	coding	531	1596	422	2017	5.0	-1	True	AATAAA	-14
PB.6755.1	chr2	-	4332	21	novel_not_in_catalog	ZRANB3	novel	2572	14	NA	NA	-18	338	any annotated donor/acceptor	FALSE	canonical	1	6081	junction_18	16028.4067563654	NA	3	NA	TRUE	NA	NA	NA	B	coding	1079	3240	66	3305	80.0	-34	True	NA	NA
PB.6755.2	chr2	-	4021	20	novel_not_in_catalog	ZRANB3	novel	2572	14	NA	NA	17	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	14226.19239057022	NA	3	1	TRUE	NA	NA	NA	B	coding	1019	3060	277	3336	25.0	-36	True	ATTAAA	-31
PB.470.21	chr1	+	1365	11	incomplete-splice_match	SRSF11	ENST00000370951.5	2385	13	15778	1183	-9	42	internal_fragment	FALSE	canonical	1	634180	junction_2	515875.25416233134	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-20	True	NA	NA
PB.11218.13	chr8	+	3485	24	novel_in_catalog	WWP1	novel	4686	25	NA	NA	0	-81	no_combination_of_known_junctions	FALSE	canonical	1	31997	junction_1	76892.07688417211	NA	15	2	TRUE	NA	NA	NA	C	coding	922	2769	215	2983	65.0	0	True	NA	NA
PB.11218.12	chr8	+	3617	24	novel_in_catalog	WWP1	novel	4686	25	NA	NA	-24	6	no_combination_of_known_junctions	FALSE	canonical	1	9788	junction_15	77612.13725561064	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	332	3028	25.0	-115	False	AATAAA	-18
PB.11218.11	chr8	+	3873	24	novel_in_catalog	WWP1	novel	4686	25	NA	NA	-27	280	no_combination_of_known_junctions	FALSE	canonical	1	31997	junction_1	76892.07688417211	NA	1	NA	TRUE	NA	NA	NA	C	coding	922	2769	242	3010	45.0	-118	False	AATAAA	-30
PB.11218.10	chr8	+	4073	24	novel_in_catalog	WWP1	novel	4686	25	NA	NA	-36	471	no_combination_of_known_junctions	FALSE	canonical	1	31997	junction_1	76892.07688417211	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	251	3019	25.0	-127	False	ATTAAA	-11
PB.8539.13	chr3	+	4876	10	novel_not_in_catalog	TTC14	novel	2881	12	NA	NA	0	325	intron_retention	FALSE	canonical	1	1207	junction_1	93730.03113210136	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	347	1366	60.0	12	True	NA	NA
PB.6154.9	chr19	+	2588	2	novel_not_in_catalog	ATF5	novel	1637	4	NA	NA	1239	1528	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	216	651	985	1635	95.0	-1865	False	NA	NA
PB.6154.8	chr19	+	1882	3	full-splice_match	ATF5	ENST00000423777.6	2069	3	66	121	-8	-121	multi-exon	FALSE	canonical	1	444360	junction_2	395634.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	312	1160	55.0	4	True	NA	NA
PB.2385.2	chr12	+	2338	2	full-splice_match	AC021054.1	ENST00000318291.4	2194	2	-138	-6	-138	6	multi-exon	FALSE	canonical	1	26385	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	3	404	20.0	-193	False	NA	NA
PB.6154.3	chr19	+	2003	3	full-splice_match	ATF5	ENST00000423777.6	2069	3	66	0	-8	0	multi-exon	FALSE	canonical	1	444360	junction_2	395634.0	NA	13	NA	TRUE	NA	NA	NA	C	coding	282	849	312	1160	10.0	4	True	AATAAA	-19
PB.6154.2	chr19	+	1409	3	full-splice_match	ATF5	ENST00000423777.6	2069	3	23	637	23	0	multi-exon	FALSE	canonical	1	444360	junction_2	395634.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	355	1203	70.0	-4157	False	NA	NA
PB.6154.1	chr19	+	2154	4	full-splice_match	ATF5	ENST00000595125.5	1637	4	114	-631	114	-6	multi-exon	FALSE	canonical	1	55290	junction_1	491107.4002211736	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	469	1317	5.0	-4507	False	AATAAA	-13
PB.8097.8	chr3	-	3170	11	full-splice_match	PRKAR2A	ENST00000265563.12	6471	11	-31	3332	-31	-263	multi-exon	FALSE	canonical	1	167587	junction_10	72563.07671371165	NA	2	NA	TRUE	NA	NA	NA	C	coding	404	1215	282	1496	90.0	-74	True	NA	NA
PB.6154.7	chr19	+	3400	2	full-splice_match	ATF5	ENST00000600336.1	682	2	-12	-2706	-12	0	multi-exon	FALSE	canonical	1	1235628	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	1907	2557	10.0	0	True	AATAAA	-19
PB.3341.2	chr14	-	2262	4	novel_in_catalog	EMC9	novel	872	5	NA	NA	-9	3	intron_retention	FALSE	canonical	1	110772	junction_3	118133.99137232076	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	1810	2214	30.0	-7	True	AATAAA	-18
PB.6154.5	chr19	+	2174	4	full-splice_match	ATF5	ENST00000597227.5	828	4	-19	-1327	-14	0	multi-exon	FALSE	canonical	1	11405	junction_1	203750.8767801176	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	483	1331	10.0	-2	True	AATAAA	-19
PB.6154.4	chr19	+	2766	2	full-splice_match	ATF5	ENST00000600336.1	682	2	-14	-2070	-14	1	multi-exon	FALSE	canonical	1	1235628	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	1909	2559	65.0	-2	True	NA	NA
PB.4164.1	chr16	+	2707	21	full-splice_match	TBL3	ENST00000569628.5	2594	21	-106	-7	-57	7	multi-exon	FALSE	canonical	1	264173	junction_1	90719.70912292157	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	617	2701	10.0	-75	False	CATAAA	-22
PB.4164.2	chr16	+	2335	21	novel_not_in_catalog	TBL3	novel	6803	22	NA	NA	17	3	intron_retention	FALSE	non_canonical	0	0	junction_3	133990.67639014104	NA	1	1	TRUE	NA	NA	NA	C	coding	694	2085	249	2333	5.0	-1	True	CATAAA	-18
PB.4164.3	chr16	+	2603	22	full-splice_match	TBL3	ENST00000568546.5	6803	22	17	4183	17	33	multi-exon	FALSE	canonical	1	264173	junction_1	93581.9667321665	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	112	2538	5.0	-1	True	CATAAA	-16
PB.6227.2	chr19	+	2483	11	novel_in_catalog	EPN1	novel	16219	11	NA	NA	-40	-6	combination_of_known_junctions	TRUE	canonical	1	436594	junction_8	323873.2129167369	NA	1	1	TRUE	NA	NA	NA	C	coding	575	1728	352	2079	15.0	-1443	False	AATAAA	-17
PB.6227.3	chr19	+	2631	12	novel_not_in_catalog	EPN1	novel	16219	11	NA	NA	2	8	any annotated donor/acceptor	FALSE	canonical	1	67853	junction_1	438581.2263680987	NA	3	NA	TRUE	NA	NA	NA	C	coding	576	1731	483	2213	15.0	0	True	AATAAA	-31
PB.10614.1	chr7	-	2147	11	full-splice_match	NCF1C	ENST00000438382.2	1427	11	80	-800	80	800	multi-exon	FALSE	canonical	1	2322	junction_10	137603.7987833548	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	92	1192	100.0	NA	False	NA	NA
PB.10614.2	chr7	-	2304	9	novel_in_catalog	NCF1C	novel	1427	11	NA	NA	55	-1	intron_retention	FALSE	canonical	1	2322	junction_8	123664.63494644497	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	117	881	25.0	NA	False	AATAAA	-16
PB.3007.2	chr12	-	6589	31	novel_not_in_catalog	NCOR2	novel	8533	47	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	53283	junction_30	219269.08616442795	NA	3	NA	TRUE	NA	NA	NA	B	coding	1836	5511	93	5603	25.0	1	True	ATTAAA	-17
PB.11440.11	chr9	+	3022	5	novel_not_in_catalog	CD274	novel	3343	6	NA	NA	17	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	38181.42435137799	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	70	801	30.0	0	True	AATAAA	-19
PB.247.5	chr1	+	2597	8	full-splice_match	KHDRBS1	ENST00000492989.1	1215	8	-132	-1250	35	-3	multi-exon	FALSE	canonical	1	55984	junction_2	609284.2047049796	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	421	1347	45.0	-6	True	AATAAA	-20
PB.7775.1	chr22	+	2775	4	full-splice_match	KDELR3	ENST00000409006.3	931	4	-34	-1810	-18	-2	multi-exon	FALSE	canonical	1	243431	junction_2	41921.56759420568	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	191	853	30.0	-52	True	AATAAA	-19
PB.7775.2	chr22	+	1692	5	full-splice_match	KDELR3	ENST00000216014.8	1728	5	34	2	18	-2	multi-exon	FALSE	canonical	1	243431	junction_2	36611.90555253168	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	139	783	30.0	0	True	AATAAA	-19
PB.10999.22	chr8	+	4360	24	incomplete-splice_match	PCM1	ENST00000519253.5	6443	39	-43	47090	-5	-2568	3prime_fragment	FALSE	canonical	1	203848	junction_6	115975.65019205843	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4065	295	4359	70.0	-8	True	NA	NA
PB.11100.2	chr8	-	3265	4	full-splice_match	TM2D2	ENST00000456397.6	3263	4	-3	1	-3	-1	multi-exon	FALSE	canonical	1	278452	junction_3	73981.21115977128	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	98	742	10.0	-41	True	AATAAA	-20
PB.11100.1	chr8	-	3448	4	novel_in_catalog	TM2D2	novel	3295	4	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	39066	junction_3	186339.9351084523	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	476	925	10.0	-41	True	AATAAA	-20
PB.11100.7	chr8	-	1313	4	full-splice_match	TM2D2	ENST00000456397.6	3263	4	-1	1951	-1	46	multi-exon	FALSE	canonical	1	278452	junction_3	73981.21115977128	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	96	740	30.0	-39	True	AATAAA	-12
PB.11100.6	chr8	-	1527	4	full-splice_match	TM2D2	ENST00000456397.6	3263	4	14	1722	-10	275	multi-exon	FALSE	canonical	1	278452	junction_3	73981.21115977128	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	81	725	35.0	-24	True	AATAAA	-15
PB.11100.5	chr8	-	2220	4	full-splice_match	TM2D2	ENST00000456397.6	3263	4	45	998	-5	-998	multi-exon	FALSE	canonical	1	278452	junction_3	73981.21115977128	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	50	694	35.0	7	True	NA	NA
PB.1382.14	chr10	-	2230	4	full-splice_match	HNRNPF	ENST00000357065.8	2617	4	-16	403	-16	2	multi-exon	FALSE	canonical	1	418897	junction_3	698402.3913494761	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	369	1613	30.0	1349	False	AATAAA	-16
PB.7454.1	chr21	-	1507	4	novel_not_in_catalog	LINC01667	novel	1137	6	NA	NA	-5683	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	102	309	319	627	15.0	NA	False	AATAAA	-13
PB.1382.17	chr10	-	2293	5	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	canonical	1	7771	junction_1	725240.1339484047	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	436	1680	35.0	4	True	AATAAA	-12
PB.728.3	chr1	-	1167	4	full-splice_match	ENSA	ENST00000369014.9	2085	4	1	917	1	273	multi-exon	FALSE	canonical	1	1052	junction_2	722899.448557451	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	126	491	75.0	-19	True	NA	NA
PB.1382.16	chr10	-	2393	5	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	95	junction_4	913973.9763571977	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	535	1779	30.0	2	True	AATAAA	-13
PB.4152.7	chr16	+	2889	4	full-splice_match	JPT2	ENST00000569256.5	911	4	24	-2002	0	-60	multi-exon	FALSE	canonical	1	12042	junction_1	394570.24806434097	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	1	True	ATTAAA	-25
PB.4152.6	chr16	+	3651	5	full-splice_match	JPT2	ENST00000248098.7	3718	5	25	42	1	-42	multi-exon	FALSE	canonical	1	816957	junction_1	146949.9227668647	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	33	605	85.0	2	True	NA	NA
PB.4152.5	chr16	+	1483	5	full-splice_match	JPT2	ENST00000248098.7	3718	5	24	2211	0	276	multi-exon	FALSE	canonical	1	816957	junction_1	146949.9227668647	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	34	606	25.0	1	True	CATAAA	-43
PB.4152.4	chr16	+	1646	5	full-splice_match	JPT2	ENST00000248098.7	3718	5	23	2049	0	-188	multi-exon	FALSE	canonical	1	816957	junction_1	146949.9227668647	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	35	607	10.0	0	True	CATAAA	-3
PB.4152.3	chr16	+	2825	5	full-splice_match	JPT2	ENST00000248098.7	3718	5	23	870	0	-274	multi-exon	FALSE	canonical	1	816957	junction_1	146949.9227668647	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	35	607	40.0	0	True	TTTAAA	-27
PB.4152.2	chr16	+	3121	6	full-splice_match	JPT2	ENST00000562684.5	3185	6	2	62	0	-62	multi-exon	TRUE	canonical	1	47418	junction_1	461552.569084216	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	35	691	5.0	0	True	ATTAAA	-23
PB.4152.1	chr16	+	3026	5	full-splice_match	JPT2	ENST00000248098.7	3718	5	29	663	5	-67	multi-exon	FALSE	canonical	1	816957	junction_1	146949.9227668647	NA	14	2	TRUE	NA	NA	NA	C	coding	190	573	29	601	15.0	6	True	ATTAAA	-18
PB.11625.83	chr9	-	1975	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835621.6377704098	NA	2	1	TRUE	NA	NA	NA	B	coding	438	1317	220	1536	10.0	-16	True	AATAAA	-12
PB.2827.12	chr12	-	3664	15	incomplete-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-33	20501	-33	-7312	3prime_fragment	FALSE	canonical	1	107717	junction_3	33339.30847416776	NA	1	NA	TRUE	NA	NA	NA	C	coding	1139	3417	247	3663	55.0	-17	True	NA	NA
PB.2827.13	chr12	-	3798	16	novel_in_catalog	UHRF1BP1L	novel	5168	21	NA	NA	-24	-7315	combination_of_known_junctions	FALSE	canonical	1	15107	junction_15	59831.73876226192	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3270	528	3797	45.0	-8	True	NA	NA
PB.2827.10	chr12	-	4881	22	novel_in_catalog	UHRF1BP1L	novel	713	4	NA	NA	-29	-395	combination_of_known_junctions	FALSE	canonical	1	15107	junction_21	62989.78786277767	NA	0	NA	TRUE	NA	NA	NA	C	coding	1416	4251	533	4783	75.0	-13	True	NA	NA
PB.2827.11	chr12	-	4342	18	incomplete-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-26	10736	-26	2453	3prime_fragment	FALSE	canonical	1	107717	junction_6	37320.41259159551	NA	0	NA	TRUE	NA	NA	NA	C	coding	1326	3981	240	4220	35.0	-10	True	ATTAAA	-20
PB.2827.16	chr12	-	2036	13	full-splice_match	UHRF1BP1L	ENST00000356828.7	2023	13	-15	2	-14	-2	multi-exon	FALSE	canonical	1	11150	junction_1	50739.35991800536	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	228	1796	40.0	2	True	AATAAA	-19
PB.6774.2	chr2	+	3561	5	full-splice_match	LYPD6	ENST00000334166.8	4071	5	-15	525	-15	0	multi-exon	FALSE	canonical	1	22688	junction_1	12850.507059548272	NA	15	NA	TRUE	NA	NA	NA	C	coding	171	516	273	788	15.0	-68	True	AATAAA	-13
PB.4152.9	chr16	+	2775	3	incomplete-splice_match	JPT2	ENST00000561516.5	1065	4	7213	-1841	-8	-50	5prime_fragment	FALSE	canonical	1	19892	junction_1	417032.5	NA	2	1	TRUE	NA	NA	NA	C	coding	34	105	229	333	15.0	5129	False	ATTAAA	-35
PB.4152.8	chr16	+	3733	6	full-splice_match	JPT2	ENST00000562684.5	3185	6	6	-554	3	-42	multi-exon	FALSE	canonical	1	47418	junction_1	461552.569084216	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	31	687	85.0	4	True	NA	NA
PB.10775.19	chr7	-	3320	11	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	59	-1123	combination_of_known_junctions	FALSE	canonical	1	7785	junction_10	167687.9435206956	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	1271	1645	65.0	1346	False	ATTAAA	-12
PB.8667.5	chr4	+	2469	13	novel_not_in_catalog	SH3BP2	novel	2265	13	NA	NA	6	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	143625.00741482913	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	985	2013	5.0	-51	True	AATAAA	-19
PB.10775.11	chr7	-	4126	11	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	87	-289	combination_of_known_junctions	FALSE	canonical	1	7785	junction_10	167687.9435206956	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	1243	1617	5.0	11	True	ATTAAA	-21
PB.6304.1	chr2	+	2720	1	antisense	novelGene_ADAM17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.8667.6	chr4	+	2378	13	full-splice_match	SH3BP2	ENST00000435136.6	2318	13	-55	-5	30	0	multi-exon	FALSE	canonical	1	46157	junction_1	104443.43254295201	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	207	1919	5.0	-5939	False	AATAAA	-22
PB.5975.2	chr19	+	983	7	full-splice_match	PSMD8	ENST00000602911.5	1330	7	9	338	-2	189	multi-exon	FALSE	canonical	1	923597	junction_1	754233.6455484136	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	24	887	10.0	1	True	AATAAA	-24
PB.3863.11	chr15	-	5883	38	incomplete-splice_match	TRPM7	ENST00000646667.1	10382	39	0	12577	0	234	3prime_fragment	FALSE	canonical	1	139826	junction_17	53651.555305288275	NA	39	5	TRUE	NA	NA	NA	C	coding	1832	5499	265	5763	25.0	-1	True	AATACA	-14
PB.4116.10	chr15	-	2883	1	novel_in_catalog	TM2D3	novel	1267	5	NA	NA	-3	582	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	10	True	NA	NA
PB.11243.2	chr8	+	3306	19	full-splice_match	DPY19L4	ENST00000414645.6	6197	19	15	2876	15	1125	multi-exon	FALSE	canonical	1	69946	junction_7	37462.42944773528	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	85	2256	30.0	15	True	AATAAA	-16
PB.6998.17	chr2	-	4963	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	1020	232	162	-232	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	109	549	80.0	1393	False	AATAAA	-26
PB.9043.2	chr4	+	3412	13	full-splice_match	ETFDH	ENST00000511912.5	3282	13	114	-244	-68	244	multi-exon	FALSE	canonical	1	118647	junction_1	71532.56657266131	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	219	2072	50.0	-15	True	AATAAA	-32
PB.11745.2	chr9	-	3962	13	novel_not_in_catalog	WHRN	novel	2847	12	NA	NA	-57	1	any annotated donor/acceptor	FALSE	canonical	1	15336	junction_12	30797.27054768815	NA	4	NA	TRUE	NA	NA	NA	B	coding	907	2724	564	3287	10.0	-35	True	AATAAA	-20
PB.8667.1	chr4	+	2650	12	novel_in_catalog	SH3BP2	novel	2265	13	NA	NA	6	0	intron_retention	TRUE	canonical	1	44508	junction_1	108957.72866431253	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	873	2195	5.0	-15	True	AATAAA	-18
PB.6097.1	chr19	+	3315	4	full-splice_match	FKRP	ENST00000318584.9	3332	4	10	7	-1	-7	multi-exon	FALSE	canonical	1	17913	junction_1	48953.05343557914	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	288	1775	55.0	-2	True	NA	NA
PB.6097.2	chr19	+	3289	5	full-splice_match	FKRP	ENST00000595868.5	556	5	-1	-2732	0	-93	multi-exon	FALSE	canonical	1	670	junction_1	55779.52143204081	NA	7	NA	TRUE	NA	NA	NA	C	coding	495	1488	348	1835	30.0	-1	True	NA	NA
PB.6998.15	chr2	-	5098	5	novel_not_in_catalog	IGFBP5	novel	6215	4	NA	NA	-23	-232	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	684183.1914207992	NA	7	NA	TRUE	NA	NA	NA	C	coding	272	819	774	1592	80.0	-2	True	AATAAA	-26
PB.8667.3	chr4	+	5388	12	novel_in_catalog	SH3BP2	novel	2265	13	NA	NA	19	2747	intron_retention	FALSE	canonical	1	44508	junction_1	108957.72866431253	NA	8	1	TRUE	NA	NA	NA	C	coding	440	1323	860	2182	25.0	-2	True	AATAAA	-14
PB.910.1	chr1	-	2176	5	full-splice_match	MPC2	ENST00000367846.8	2177	5	9	-8	9	8	multi-exon	FALSE	canonical	1	1323724	junction_3	250587.4124158075	NA	0	NA	TRUE	NA	NA	NA	A	coding	127	384	191	574	20.0	-37	True	ATTAAA	-20
PB.3962.13	chr15	-	1730	13	full-splice_match	HEXA	ENST00000567159.5	1582	13	-20	-128	-10	0	multi-exon	FALSE	canonical	1	757827	junction_8	183070.25195323848	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	42	1571	85.0	-29	True	NA	NA
PB.3962.12	chr15	-	2393	12	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-11	-60556	intron_retention	FALSE	canonical	1	757827	junction_7	164670.11893263832	NA	0	NA	TRUE	NA	NA	NA	B	coding	474	1425	21	1445	85.0	-8	True	NA	NA
PB.3962.11	chr15	-	2253	15	novel_not_in_catalog	AC009690.1	novel	4374	16	NA	NA	-16	-59164	any annotated donor/acceptor	FALSE	canonical	1	6638	junction_3	380801.43027039635	NA	0	NA	TRUE	NA	NA	NA	B	coding	485	1458	26	1483	40.0	-13	True	AATAAA	-23
PB.3962.10	chr15	-	2319	11	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-7	-59163	intron_retention	FALSE	canonical	1	13842	junction_8	347610.2391783217	NA	0	NA	TRUE	NA	NA	NA	B	coding	253	762	522	1283	35.0	-4	True	AATAAA	-24
PB.3962.14	chr15	-	3399	6	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-28	-65055	intron_retention	FALSE	canonical	1	757827	junction_2	145212.22747055427	NA	2	NA	TRUE	NA	NA	NA	B	coding	110	333	2435	2767	75.0	-25	True	NA	NA
PB.9043.1	chr4	+	2146	13	full-splice_match	ETFDH	ENST00000511912.5	3282	13	182	954	0	70	multi-exon	FALSE	canonical	1	118647	junction_1	71532.56657266131	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	151	2004	45.0	-9	True	AATAAA	-17
PB.3032.1	chr12	+	3114	5	full-splice_match	ZNF84	ENST00000539354.5	3237	5	116	7	3	-7	multi-exon	FALSE	canonical	1	29702	junction_1	70663.37918389907	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	231	2447	30.0	-19	True	AATAAA	-18
PB.3032.3	chr12	+	3812	4	novel_in_catalog	ZNF84	novel	7020	5	NA	NA	5	-2	intron_retention	TRUE	canonical	1	29702	junction_1	75820.0377619414	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	1077	3140	15.0	-41	True	AATAAA	-23
PB.3032.2	chr12	+	3274	5	novel_in_catalog	ZNF84	novel	7020	5	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	1256	junction_1	82239.85623581488	NA	1	1	TRUE	NA	NA	NA	C	coding	738	2217	390	2606	30.0	0	True	AATAAA	-19
PB.2736.1	chr12	-	2108	3	full-splice_match	LLPH	ENST00000266604.6	7746	3	19	5619	19	1133	multi-exon	FALSE	canonical	1	572	junction_1	233181.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	53	442	25.0	-1	True	AGTAAA	-19
PB.3032.4	chr12	+	4627	5	novel_in_catalog	ZNF84	novel	7020	5	NA	NA	6	1476	combination_of_known_junctions	FALSE	canonical	1	9705	junction_1	78777.96317657623	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	261	2477	40.0	-40	True	AATAAA	-20
PB.3032.7	chr12	+	3412	6	novel_not_in_catalog	ZNF84	novel	7020	5	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	691	junction_2	91111.37166479275	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	528	2744	30.0	0	True	AATAAA	-19
PB.2736.2	chr12	-	1214	3	full-splice_match	LLPH	ENST00000266604.6	7746	3	19	6513	19	239	multi-exon	FALSE	canonical	1	572	junction_1	233181.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	129	390	53	442	20.0	-1	True	AATAAA	-18
PB.9612.33	chr5	+	2074	9	full-splice_match	DOCK2	ENST00000520450.5	2774	9	699	1	699	-1	multi-exon	FALSE	canonical	1	325075	junction_3	76117.08914221809	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	447	1556	25.0	NA	False	AATAAA	-18
PB.9612.34	chr5	+	1590	8	incomplete-splice_match	DOCK2	ENST00000520450.5	2774	9	11027	0	-7979	0	5prime_fragment	FALSE	canonical	1	325075	junction_2	81253.54656347535	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	82	1071	25.0	-19	False	AATAAA	-19
PB.8587.24	chr3	+	5901	4	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2449245	junction_2	312167.8780303957	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-15
PB.8666.8	chr4	-	1791	6	full-splice_match	TNIP2	ENST00000315423.11	1974	6	2	181	2	-143	multi-exon	FALSE	canonical	1	227604	junction_1	72531.74718866216	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	86	1375	40.0	-39	True	AATAAA	-20
PB.8587.26	chr3	+	3001	10	incomplete-splice_match	EIF4A2	ENST00000425053.5	1977	12	0	111	0	-111	intron_retention	FALSE	canonical	1	1549925	junction_3	745208.5559195683	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	35	1117	20.0	0	True	AATAAA	-22
PB.8587.27	chr3	+	5526	2	full-splice_match	EIF4A2	ENST00000465222.1	676	2	2	-4852	0	0	multi-exon	FALSE	canonical	1	2307510	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-16
PB.8587.20	chr3	+	4845	5	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2307510	junction_1	60610.68485166209	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-14
PB.8587.21	chr3	+	4367	5	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1549925	junction_2	587250.7152726593	NA	2	NA	TRUE	NA	NA	NA	C	coding	180	543	232	774	20.0	0	True	AATAAA	-15
PB.8587.22	chr3	+	6318	1	novel_in_catalog	EIF4A2	novel	1919	11	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-16
PB.8587.23	chr3	+	3436	7	incomplete-splice_match	EIF4A2	ENST00000443963.5	1729	10	-20	3	0	0	intron_retention	FALSE	canonical	1	780423	junction_1	731156.1294747898	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	183	842	20.0	0	True	AATAAA	-16
PB.8666.1	chr4	-	1929	6	full-splice_match	TNIP2	ENST00000315423.11	1974	6	40	5	-5	-5	multi-exon	FALSE	canonical	1	227604	junction_1	72531.74718866216	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	48	1337	20.0	-1	True	AATAAA	-17
PB.8666.3	chr4	-	3973	4	novel_in_catalog	TNIP2	novel	2006	6	NA	NA	7	-5	intron_retention	FALSE	canonical	1	240418	junction_3	56080.50052280997	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	36	1025	20.0	11	True	AATAAA	-17
PB.8666.2	chr4	-	4492	3	novel_in_catalog	TNIP2	novel	2006	6	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	240418	junction_2	61267.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	55	768	20.0	-8	True	AATAAA	-17
PB.8666.5	chr4	-	2112	5	novel_in_catalog	TNIP2	novel	2006	6	NA	NA	2	-5	intron_retention	FALSE	canonical	1	227604	junction_1	62816.89589742158	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	41	1030	20.0	6	True	AATAAA	-17
PB.8666.4	chr4	-	2447	5	novel_in_catalog	TNIP2	novel	2006	6	NA	NA	-12	-5	intron_retention	FALSE	canonical	1	227604	junction_1	78568.359781069	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	66	779	20.0	-19	True	AATAAA	-17
PB.8666.7	chr4	-	1993	6	novel_not_in_catalog	TNIP2	novel	2006	6	NA	NA	-2296	-5	any annotated donor/acceptor	FALSE	canonical	1	1077	junction_5	148329.00451280593	NA	18	1	TRUE	NA	NA	NA	C	coding	322	969	433	1401	20.0	7881	False	AATAAA	-17
PB.8666.6	chr4	-	1969	4	novel_in_catalog	TNIP2	novel	2006	6	NA	NA	-24	-5	intron_retention	FALSE	canonical	1	6497	junction_3	165488.89295323988	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	856	1377	20.0	-1	True	AATAAA	-17
PB.728.7	chr1	-	2418	3	full-splice_match	ENSA	ENST00000513281.5	1369	3	-49	-1000	-25	0	multi-exon	FALSE	canonical	1	1052	junction_1	109320.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	16	402	15.0	-2	True	NA	NA
PB.1174.5	chr1	-	1397	6	full-splice_match	JMJD4	ENST00000620518.4	2432	6	-24	1059	-24	865	multi-exon	FALSE	canonical	1	220923	junction_2	52870.066800033455	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	35	1288	5.0	-25	True	AATAAA	-38
PB.7742.57	chr22	-	3921	28	incomplete-splice_match	MYH9	ENST00000216181.10	7554	41	100	12911	100	1324	3prime_fragment	FALSE	canonical	1	1396727	junction_27	626548.98534152	NA	0	NA	TRUE	NA	NA	NA	C	coding	1247	3741	181	3921	35.0	-1	True	NA	NA
PB.6266.11	chr19	+	2742	7	novel_not_in_catalog	ZNF544	novel	3587	7	NA	NA	10	-4	any annotated donor/acceptor	FALSE	canonical	1	2000	junction_6	121579.61959144304	NA	3	NA	TRUE	NA	NA	NA	C	coding	379	1140	717	1856	35.0	15	True	NA	NA
PB.6266.10	chr19	+	2938	7	novel_in_catalog	ZNF544	novel	3587	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	76846	junction_1	103280.40653967237	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	252	2399	65.0	13	True	NA	NA
PB.8013.1	chr3	-	2427	1	full-splice_match	AC097359.2	ENST00000604992.1	2389	1	-57	19	-57	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-40	False	NA	NA
PB.9299.12	chr5	+	3464	15	full-splice_match	POLK	ENST00000241436.8	5911	15	135	2312	0	-270	multi-exon	FALSE	canonical	1	15478	junction_1	50516.86104052542	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	38	2650	30.0	0	True	ATTAAA	-17
PB.7556.7	chr21	-	1523	6	full-splice_match	UBE2G2	ENST00000345496.6	3566	6	187	1856	-6	495	multi-exon	FALSE	canonical	1	532334	junction_2	189494.1339425577	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	85	582	75.0	5095	False	NA	NA
PB.6087.2	chr19	-	2416	3	full-splice_match	SIX5	ENST00000643139.1	2943	3	526	1	302	0	multi-exon	FALSE	canonical	1	122705	junction_2	29685.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	169	510	1192	1701	10.0	1787	False	AATAAA	-20
PB.6174.4	chr19	-	4003	5	novel_in_catalog	ZNF615	novel	4094	6	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	9853	junction_1	27802.81049192689	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	261	2456	25.0	-11	True	NA	NA
PB.6174.6	chr19	-	3818	4	full-splice_match	ZNF615	ENST00000391795.7	2698	4	0	-1120	0	-1	multi-exon	FALSE	canonical	1	7422	junction_3	34851.63481898024	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	61	2271	25.0	-30	True	NA	NA
PB.6174.1	chr19	-	4056	6	full-splice_match	ZNF615	ENST00000594083.5	4020	6	-34	-2	0	0	multi-exon	FALSE	canonical	1	26610	junction_5	19046.638668279506	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	280	2508	20.0	-30	True	NA	NA
PB.9299.10	chr5	+	3760	16	novel_not_in_catalog	POLK	novel	5911	15	NA	NA	0	-16	any annotated donor/acceptor	FALSE	canonical	1	10583	junction_6	71574.13406295757	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	38	2692	85.0	0	True	NA	NA
PB.6174.3	chr19	-	4113	6	full-splice_match	ZNF615	ENST00000599177.5	4122	6	14	-5	0	-1	multi-exon	FALSE	canonical	1	3440	junction_1	26730.508819698887	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	695	2566	25.0	-1	True	NA	NA
PB.6174.2	chr19	-	4374	8	novel_in_catalog	ZNF615	novel	4094	6	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	2877	junction_6	25959.46186433213	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	599	2827	25.0	-4	True	NA	NA
PB.8747.7	chr4	+	2585	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	92	2568	-3	232	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	193	795	30.0	-9	True	TTTAAA	-6
PB.2307.12	chr11	+	3092	6	incomplete-splice_match	ARCN1	ENST00000264028.4	3845	10	12025	7	12025	-6	5prime_fragment	FALSE	canonical	1	883106	junction_2	170964.6800744528	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	97	885	40.0	NA	False	AATAAA	-10
PB.9299.16	chr5	+	2181	14	novel_in_catalog	POLK	novel	5911	15	NA	NA	0	-1288	no_combination_of_known_junctions	FALSE	canonical	1	2427	junction_1	63095.78686166222	NA	1	1	TRUE	NA	NA	NA	C	coding	669	2007	175	2181	55.0	0	True	TTTAAA	-37
PB.145.6	chr1	-	4359	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	5	6	intron_retention	FALSE	canonical	1	43711	junction_12	372186.5576305917	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	577	2238	35.0	-10	True	AATAAA	-22
PB.7556.3	chr21	-	1860	7	novel_not_in_catalog	UBE2G2	novel	3566	6	NA	NA	3	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	319214.407455066	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	69	566	5.0	3	True	AATAAA	-19
PB.9299.14	chr5	+	2666	14	incomplete-splice_match	POLK	ENST00000241436.8	5911	15	135	3254	0	-98	3prime_fragment	FALSE	canonical	1	15478	junction_1	51295.291975387336	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	38	2575	25.0	0	True	ATTAAA	-18
PB.11743.1	chr9	+	2974	1	incomplete-splice_match	ZNF618	ENST00000615615.4	9289	14	176453	883	24814	-883	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	107	324	714	1037	90.0	NA	False	AAGAAA	-14
PB.9299.15	chr5	+	2670	15	full-splice_match	POLK	ENST00000241436.8	5911	15	136	3105	1	-1	multi-exon	FALSE	canonical	1	15478	junction_1	50516.86104052542	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	37	2649	35.0	1	True	AGTAAA	-21
PB.12107.1	chrX	+	2168	3	full-splice_match	NBDY	ENST00000374922.8	1529	3	-34	-605	-16	605	multi-exon	FALSE	canonical	1	675934	junction_1	22158.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-279	False	NA	NA
PB.3605.18	chr14	+	3076	14	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	70326	junction_9	151897.91671534386	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	106	1848	80.0	-34	True	AATAAA	-35
PB.7179.1	chr20	-	4510	3	novel_not_in_catalog	FLRT3	novel	4776	2	NA	NA	-3	-10	any annotated donor/acceptor	FALSE	canonical	1	16313	junction_1	12384.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	1009	2958	50.0	0	True	AATAAA	-18
PB.12107.2	chrX	+	1537	3	full-splice_match	NBDY	ENST00000374922.8	1529	3	-16	8	2	-8	multi-exon	FALSE	canonical	1	675934	junction_1	22158.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-22	True	ATTAAA	-12
PB.6560.21	chr2	-	1946	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-12	2951	-1	-2951	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	207	857	20.0	-2	True	AATAAA	-33
PB.6560.20	chr2	-	2582	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-29	2332	1	-2332	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	224	874	70.0	-19	True	ATTAAA	-20
PB.6560.23	chr2	-	1692	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	3	3190	1	-3190	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	192	842	20.0	13	True	AATAAA	-21
PB.6560.22	chr2	-	1825	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-12	3072	-1	-3072	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	207	857	15.0	-2	True	ATTAAA	-19
PB.3605.11	chr14	+	4016	16	full-splice_match	ZC3H14	ENST00000393514.9	2195	16	-123	-1698	1	529	multi-exon	FALSE	canonical	1	38192	junction_9	153165.16172675244	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	124	2259	20.0	1	True	AATAAA	-14
PB.5764.1	chr19	+	1286	9	full-splice_match	RAD23A	ENST00000586534.5	1746	9	-32	492	1	-119	multi-exon	FALSE	canonical	1	836558	junction_6	529219.0869566686	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	94	1185	70.0	-6	True	TATAAA	-41
PB.3605.13	chr14	+	5189	17	full-splice_match	ZC3H14	ENST00000251038.9	18281	17	104	12988	1	-792	multi-exon	FALSE	canonical	1	281539	junction_10	115875.09142065905	NA	3	NA	TRUE	NA	NA	NA	C	coding	736	2211	122	2332	55.0	3	True	ATTAAA	-42
PB.3605.12	chr14	+	3008	14	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	11730	junction_8	187504.88230055338	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	123	1781	75.0	2	True	AATAAA	-34
PB.3605.15	chr14	+	3070	15	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	1	-92	combination_of_known_junctions	FALSE	canonical	1	125480	junction_10	146098.9189941709	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	120	1934	60.0	5	True	NA	NA
PB.3605.14	chr14	+	3446	17	full-splice_match	ZC3H14	ENST00000251038.9	18281	17	106	14729	1	-112	multi-exon	FALSE	canonical	1	281539	junction_10	115875.09142065905	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	120	2330	25.0	5	True	NA	NA
PB.3605.17	chr14	+	5988	17	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	2	13	combination_of_known_junctions	FALSE	canonical	1	281539	junction_10	123440.16240065468	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	119	2326	70.0	6	True	AATAAA	-26
PB.1743.1	chr11	+	1771	4	full-splice_match	RASSF7	ENST00000397582.7	1731	4	-30	-10	-30	1	multi-exon	FALSE	canonical	1	144689	junction_1	104261.78861031601	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	137	1129	10.0	-7945	False	AATAAA	-16
PB.10777.12	chr7	+	4923	6	incomplete-splice_match	BCAP29	ENST00000445771.6	1157	9	-30	13906	-11	4253	3prime_fragment	FALSE	canonical	1	279651	junction_1	124617.50157084677	NA	5	NA	TRUE	NA	NA	NA	C	coding	202	609	82	690	15.0	-11	True	AAGAAA	-18
PB.10777.13	chr7	+	2989	9	full-splice_match	BCAP29	ENST00000445771.6	1157	9	-19	-1813	0	1031	multi-exon	FALSE	canonical	1	29201	junction_8	230468.41524216367	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	71	1117	35.0	0	True	AATAAA	-19
PB.10777.10	chr7	+	4319	8	full-splice_match	BCAP29	ENST00000005259.8	4572	8	252	1	-17	-1	multi-exon	FALSE	canonical	1	279651	junction_1	114728.25877165359	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	88	813	25.0	-17	True	NA	NA
PB.10777.11	chr7	+	2465	8	novel_in_catalog	BCAP29	novel	4572	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	105444	junction_7	181104.21298630178	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	88	1101	20.0	-17	True	ATTAAA	-20
PB.10777.16	chr7	+	3786	6	incomplete-splice_match	BCAP29	ENST00000445771.6	1157	9	-21	15034	-2	3125	3prime_fragment	FALSE	canonical	1	279651	junction_1	124617.50157084677	NA	5	NA	TRUE	NA	NA	NA	C	coding	202	609	73	681	25.0	-2	True	NA	NA
PB.1743.2	chr11	+	2416	3	incomplete-splice_match	RASSF7	ENST00000431809.5	1745	4	607	-31	24	3	5prime_fragment	FALSE	canonical	1	295164	junction_2	51733.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	780	1772	10.0	24	True	AATAAA	-18
PB.4251.9	chr16	-	2818	10	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	1	49488	junction_6	226932.88877159744	NA	4	NA	TRUE	NA	NA	NA	C	coding	506	1521	1190	2710	40.0	50	True	AATAAA	-20
PB.4251.8	chr16	-	2870	11	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	66	-4	combination_of_known_junctions	FALSE	canonical	1	49488	junction_6	189855.37898940343	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	1242	2762	40.0	-4	True	AATAAA	-20
PB.4251.7	chr16	-	3273	13	full-splice_match	TXNDC11	ENST00000356957.7	3178	13	-99	4	-59	-4	multi-exon	FALSE	canonical	1	1847	junction_8	211097.74863020933	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	208	3165	40.0	762	False	AATAAA	-20
PB.4251.6	chr16	-	3316	13	novel_not_in_catalog	TXNDC11	novel	3140	12	NA	NA	-63	-4	any annotated donor/acceptor	FALSE	canonical	1	3453	junction_8	210542.82316391915	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	212	3208	40.0	758	False	AATAAA	-20
PB.10777.18	chr7	+	3039	9	novel_in_catalog	BCAP29	novel	4572	8	NA	NA	0	1031	combination_of_known_junctions	FALSE	canonical	1	9281	junction_8	236662.30953958296	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	71	925	35.0	0	True	AATAAA	-19
PB.4251.4	chr16	-	3109	12	full-splice_match	TXNDC11	ENST00000283033.9	3140	12	25	6	-15	-3	multi-exon	FALSE	canonical	1	193446	junction_11	157485.8878684134	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	124	3000	35.0	3	True	AATAAA	-21
PB.4251.3	chr16	-	2889	10	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	8221	junction_8	212386.27829627602	NA	2	NA	TRUE	NA	NA	NA	C	coding	882	2649	127	2775	30.0	0	True	AATAAA	-26
PB.4251.2	chr16	-	2670	11	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	50497	junction_8	194946.30186287197	NA	11	1	TRUE	NA	NA	NA	C	coding	744	2235	328	2562	40.0	1154	False	AATAAA	-20
PB.6515.1	chr2	-	2187	5	full-splice_match	C1D	ENST00000355848.7	2233	5	-11	57	0	-57	multi-exon	TRUE	canonical	1	467	junction_2	34374.85590515253	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	60	485	30.0	-5	True	AATAAA	-17
PB.11805.4	chr9	-	3114	12	full-splice_match	SH2D3C	ENST00000314830.12	3124	12	10	0	10	0	multi-exon	FALSE	canonical	1	69051	junction_11	35936.98008072345	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	105	2687	5.0	-6	True	AATAAA	-15
PB.3476.1	chr14	+	3224	3	intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	48	junction_2	821.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-2	True	AATAAA	-27
PB.11633.11	chr9	+	6034	27	novel_not_in_catalog	DAPK1	novel	5743	26	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	4704	junction_22	65014.41949797202	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	3148	4767	20.0	-5	True	AATAAA	-16
PB.145.4	chr1	-	4024	13	full-splice_match	HP1BP3	ENST00000312239.9	3938	13	-102	16	-102	5	multi-exon	FALSE	canonical	1	42551	junction_12	372445.7783703686	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	243	1904	30.0	-27	True	AATAAA	-21
PB.8695.3	chr4	+	4399	18	full-splice_match	SH3TC1	ENST00000515682.5	4293	18	-102	-4	-29	4	multi-exon	FALSE	canonical	1	20117	junction_2	61622.02474006956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1260	3783	477	4259	35.0	-49	True	AATAAA	-19
PB.11643.2	chr9	-	1447	10	full-splice_match	AUH	ENST00000375731.8	1577	10	-19	149	-19	-4	multi-exon	FALSE	canonical	1	139907	junction_9	47075.315491950416	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	44	1063	50.0	-37	False	AATAAA	-15
PB.9899.1	chr6	-	1854	4	incomplete-splice_match	NOTCH4	ENST00000474612.1	5267	10	6571	1	-622	-1	5prime_fragment	FALSE	canonical	1	51784	junction_3	2383.0738320263786	NA	1	NA	TRUE	NA	NA	NA	A	coding	412	1239	23	1261	20.0	-1187	False	AATAAA	-17
PB.6852.4	chr2	-	711	5	full-splice_match	ATP5MC3	ENST00000284727.8	5484	5	2884	1889	-13	-2	multi-exon	FALSE	canonical	1	4231677	junction_4	941585.7157548112	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	142	570	15.0	-15	False	ATTAAA	-12
PB.10607.30	chr7	+	5161	33	incomplete-splice_match	GTF2I	ENST00000614986.4	4415	34	-55	1	18	1	intron_retention	FALSE	canonical	1	3722	junction_22	541862.6255438237	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	372	3308	10.0	-15	True	AATAAA	-26
PB.7008.1	chr2	+	3166	8	full-splice_match	CNOT9	ENST00000273064.10	4079	8	256	657	21	-1	multi-exon	FALSE	canonical	1	287726	junction_1	136592.3742249477	NA	6	NA	TRUE	NA	NA	NA	C	coding	299	900	120	1019	40.0	-3	True	AATAAA	-18
PB.7008.6	chr2	+	2206	8	full-splice_match	CNOT9	ENST00000295701.9	1126	8	-35	-1045	-19	-9	multi-exon	FALSE	canonical	1	101851	junction_7	207520.08950421336	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	116	892	20.0	1	True	AATAAA	-20
PB.1800.1	chr11	-	1911	8	novel_in_catalog	CYB5R2	novel	1338	10	NA	NA	2	0	intron_retention	FALSE	canonical	1	80314	junction_7	39915.57268505001	NA	1	NA	TRUE	NA	NA	NA	A	coding	115	348	1295	1642	30.0	0	True	AATAAA	-15
PB.6852.2	chr2	-	2365	5	full-splice_match	ATP5MC3	ENST00000284727.8	5484	5	2899	220	2	-220	multi-exon	FALSE	canonical	1	4231677	junction_4	941585.7157548112	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	127	555	25.0	0	True	ATTAAA	-15
PB.10607.31	chr7	+	4128	32	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-54	970	19	-237	intron_retention	FALSE	canonical	1	3722	junction_21	553993.6477799553	NA	2	NA	TRUE	NA	NA	NA	C	coding	957	2874	371	3244	20.0	-14	True	ATTAAA	-24
PB.8645.10	chr4	+	3206	13	full-splice_match	PIGG	ENST00000453061.6	3218	13	10	2	0	-1	multi-exon	FALSE	canonical	1	91647	junction_10	46665.01979437834	NA	1	NA	TRUE	NA	NA	NA	C	coding	983	2952	97	3048	25.0	0	True	AATAAA	-15
PB.8645.11	chr4	+	2583	8	incomplete-splice_match	PIGG	ENST00000453061.6	3218	13	38	16687	10	0	3prime_fragment	FALSE	canonical	1	162957	junction_1	23365.916347866827	NA	3	NA	TRUE	NA	NA	NA	C	coding	569	1710	69	1778	15.0	28	True	AATAAA	-20
PB.6742.8	chr2	-	5669	8	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	1253	junction_6	312826.6913981319	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	575	1081	20.0	-15	True	AATAAA	-17
PB.1166.22	chr1	-	2679	17	novel_not_in_catalog	PARP1	novel	3958	23	NA	NA	3	290	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	651623.5733197473	NA	2	1	TRUE	NA	NA	NA	C	coding	572	1719	506	2224	20.0	19	True	AATAAA	-15
PB.10607.35	chr7	+	2655	24	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-47	11246	26	-6	3prime_fragment	FALSE	canonical	1	3722	junction_21	566407.0896693517	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2292	364	2655	55.0	-7	True	NA	NA
PB.5849.1	chr19	+	3174	3	full-splice_match	KLHL26	ENST00000300976.8	4407	3	32	1201	-28	715	multi-exon	TRUE	canonical	1	44184	junction_1	21437.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	615	1848	59	1906	10.0	-54	False	AATAAA	-34
PB.8950.4	chr4	+	2452	6	full-splice_match	UGT8	ENST00000310836.10	4084	6	266	1366	-49	262	multi-exon	FALSE	canonical	1	46652	junction_1	24782.176366090207	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	257	1882	85.0	0	True	NA	NA
PB.10420.1	chr7	+	2397	3	novel_not_in_catalog	AC005083.1	novel	667	4	NA	NA	187	2	intron_retention	FALSE	canonical	1	10404	junction_2	7415.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	2	True	ATTAAA	-25
PB.6243.1	chr19	+	3690	3	novel_in_catalog	AC003002.2	novel	521	3	NA	NA	41142	8053	no_combination_of_known_junctions	FALSE	canonical	1	6442	junction_1	8134.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	771	2316	350	2665	20.0	0	True	NA	NA
PB.4674.10	chr17	-	1688	13	full-splice_match	NCBP3	ENST00000389005.5	12770	13	5	11077	5	-702	multi-exon	FALSE	canonical	1	263943	junction_6	36722.4099332486	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1665	24	1688	70.0	-1	True	NA	NA
PB.4674.11	chr17	-	2161	7	incomplete-splice_match	NCBP3	ENST00000389005.5	12770	13	4	21436	4	-1097	3prime_fragment	FALSE	canonical	1	277023	junction_6	37288.683098524976	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	25	900	75.0	-2	True	NA	NA
PB.10126.10	chr6	-	3606	1	novel_in_catalog	CCNC	novel	2473	12	NA	NA	1	-3036	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	149	450	1	450	70.0	-2	True	TTTAAA	-15
PB.11246.5	chr8	-	5591	4	full-splice_match	TP53INP1	ENST00000342697.4	5638	4	46	1	1	-1	multi-exon	FALSE	canonical	1	81688	junction_1	75752.19417724259	NA	2	NA	TRUE	NA	NA	NA	C	coding	240	723	363	1085	25.0	0	True	AATAAA	-16
PB.10126.11	chr6	-	2166	1	novel_in_catalog	CCNC	novel	2473	12	NA	NA	-8	-4485	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	152	459	1	459	75.0	-11	True	AATGAA	-6
PB.3609.10	chr14	-	4064	1	novel_in_catalog	AL137230.2	novel	452	4	NA	NA	335457	-202827	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	117	354	488	841	100.0	-38	True	CATAAA	-38
PB.3650.2	chr14	-	1873	1	full-splice_match	SCARNA13	ENST00000516672.1	275	1	-1162	-436	-1162	436	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-41	False	ATTAAA	-9
PB.8751.10	chr4	-	3649	7	novel_in_catalog	RBM47	novel	4816	6	NA	NA	-22	-9	combination_of_known_junctions	FALSE	canonical	1	29150	junction_2	81666.21328853744	NA	26	NA	TRUE	NA	NA	NA	C	coding	524	1575	518	2092	60.0	-13	False	AGTAAA	-26
PB.8751.11	chr4	-	3811	8	novel_in_catalog	RBM47	novel	4816	6	NA	NA	-80	-112	combination_of_known_junctions	FALSE	canonical	1	42225	junction_6	84910.84117292607	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	576	2357	30.0	-71	False	ATTAAA	-18
PB.8751.12	chr4	-	3566	7	novel_not_in_catalog	RBM47	novel	4816	6	NA	NA	-44	-106	any annotated donor/acceptor	FALSE	canonical	1	2894	junction_1	72903.58065147113	NA	2	NA	TRUE	NA	NA	NA	C	coding	543	1632	540	2171	20.0	-35	False	ATTAAA	-24
PB.8751.13	chr4	-	3942	7	full-splice_match	RBM47	ENST00000295971.11	4056	7	2	112	2	-112	multi-exon	FALSE	canonical	1	86494	junction_6	63366.93715026438	NA	4	NA	TRUE	NA	NA	NA	C	coding	593	1782	707	2488	30.0	1	True	ATTAAA	-18
PB.8751.14	chr4	-	3537	7	novel_not_in_catalog	RBM47	novel	4816	6	NA	NA	-50	-113	any annotated donor/acceptor	FALSE	canonical	1	3434	junction_6	102154.52532438296	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	306	2084	25.0	711	False	ATTAAA	-17
PB.7971.3	chr3	+	2325	7	novel_not_in_catalog	RAB5A	novel	2536	6	NA	NA	53	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	172791.38911488038	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	335	982	40.0	-12	True	AATAAA	-8
PB.7971.2	chr3	+	2457	8	novel_not_in_catalog	RAB5A	novel	2536	6	NA	NA	35	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	212554.6015521179	NA	2	1	TRUE	NA	NA	NA	C	coding	194	585	349	933	40.0	-30	True	AATAAA	-8
PB.7971.1	chr3	+	2239	6	full-splice_match	RAB5A	ENST00000273047.8	2536	6	292	5	-8	-5	multi-exon	FALSE	canonical	1	308283	junction_3	77062.28066440806	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	245	892	20.0	-8	True	AATAAA	-12
PB.7971.7	chr3	+	2382	7	novel_not_in_catalog	RAB5A	novel	2536	6	NA	NA	-57	-9	any annotated donor/acceptor	FALSE	canonical	1	356	junction_5	204252.34143149987	NA	9	1	TRUE	NA	NA	NA	C	coding	231	696	294	989	40.0	-6	True	AATAAA	-8
PB.3195.18	chr13	-	4603	1	genic	TBC1D4	novel	NA	NA	NA	NA	-82	-164812	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	C	coding	317	954	430	1383	40.0	451	False	AATAAA	-23
PB.7971.5	chr3	+	2451	8	novel_not_in_catalog	RAB5A	novel	2536	6	NA	NA	64	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	211028.91260542613	NA	15	1	TRUE	NA	NA	NA	C	coding	237	714	338	1051	15.0	-1	True	AATAAA	-15
PB.7971.4	chr3	+	2343	7	novel_not_in_catalog	RAB5A	novel	2536	6	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	8655	junction_6	202172.94703249878	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	237	950	40.0	0	True	AATAAA	-8
PB.3195.14	chr13	-	1503	1	incomplete-splice_match	TBC1D4	ENST00000648194.1	6656	20	80341	1669	16147	-500	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.3195.17	chr13	-	3900	11	incomplete-splice_match	TBC1D4	ENST00000377625.6	6182	19	-52	26766	-52	1351	3prime_fragment	FALSE	canonical	1	122828	junction_8	21771.82138935555	NA	1	NA	TRUE	NA	NA	NA	C	coding	737	2214	400	2613	80.0	2	True	NA	NA
PB.3195.16	chr13	-	2423	13	novel_not_in_catalog	TBC1D4	novel	6656	20	NA	NA	-258	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	47209.32911181327	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2289	133	2421	65.0	275	False	NA	NA
PB.11768.8	chr9	+	2445	9	novel_in_catalog	MRRF	novel	1841	6	NA	NA	-10	-11	intron_retention	FALSE	canonical	1	15472	junction_2	55691.98780892432	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	410	886	50.0	-17	True	AATAAA	-32
PB.3195.12	chr13	-	5796	19	full-splice_match	TBC1D4	ENST00000377625.6	6182	19	-66	452	-66	-445	multi-exon	FALSE	canonical	1	122828	junction_16	62144.3456355374	NA	0	NA	TRUE	NA	NA	NA	C	coding	1235	3708	414	4121	40.0	-12	True	AATAAA	-30
PB.6930.3	chr2	-	2037	4	novel_in_catalog	FTCDNL1	novel	944	4	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	8600	junction_3	19300.478405124228	NA	1	NA	TRUE	NA	NA	NA	B	coding	147	444	432	875	25.0	9	True	AATAAA	-17
PB.11332.1	chr8	-	1017	12	full-splice_match	TATDN1	ENST00000276692.10	1018	12	-1	2	-1	0	multi-exon	FALSE	canonical	1	37697	junction_3	95446.29203738587	NA	0	NA	TRUE	NA	NA	NA	A	coding	297	894	40	933	45.0	-2	True	AATAAA	-13
PB.10341.4	chr6	-	4361	9	full-splice_match	PHF10	ENST00000612128.1	4395	9	28	6	28	-6	multi-exon	FALSE	canonical	1	94313	junction_6	101918.01873534189	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	47	1180	15.0	20	True	AATAAA	-17
PB.393.11	chr1	-	3032	16	novel_in_catalog	STIL	novel	5225	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	31695	junction_2	32735.474657047853	NA	0	NA	TRUE	NA	NA	NA	B	coding	961	2883	148	3030	65.0	7	True	NA	NA
PB.393.10	chr1	-	3144	16	novel_in_catalog	STIL	novel	5225	18	NA	NA	-53	0	intron_retention	FALSE	canonical	1	52183	junction_2	29850.968709835124	NA	0	NA	TRUE	NA	NA	NA	B	coding	978	2934	209	3142	65.0	-26	False	NA	NA
PB.393.13	chr1	-	2897	17	novel_in_catalog	STIL	novel	5225	18	NA	NA	2	0	intron_retention	FALSE	canonical	1	29471	junction_11	36877.471277730576	NA	1	1	TRUE	NA	NA	NA	B	coding	914	2742	154	2895	65.0	1	True	NA	NA
PB.393.12	chr1	-	2934	17	novel_in_catalog	STIL	novel	5225	18	NA	NA	12	0	intron_retention	FALSE	canonical	1	28316	junction_2	37289.581428664496	NA	0	NA	TRUE	NA	NA	NA	B	coding	932	2796	137	2932	65.0	18	True	NA	NA
PB.8087.1	chr3	-	7349	38	full-splice_match	PLXNB1	ENST00000358536.8	7308	38	-40	-1	-22	-1	multi-exon	TRUE	canonical	1	39494	junction_37	103440.07105123239	NA	0	NA	TRUE	NA	NA	NA	A	coding	2135	6408	311	6718	20.0	4469	False	ATTAAA	-15
PB.10076.2	chr6	+	1938	16	novel_in_catalog	TTK	novel	3725	22	NA	NA	-21	-4939	combination_of_known_junctions	FALSE	canonical	1	10860	junction_1	67826.81958615879	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1839	100	1938	65.0	-21	True	NA	NA
PB.10076.3	chr6	+	2627	22	full-splice_match	TTK	ENST00000369798.6	3010	22	35	348	-10	-348	multi-exon	FALSE	canonical	1	106230	junction_1	54112.89023543885	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2550	77	2626	80.0	-10	True	NA	NA
PB.9380.1	chr7	-	2941	1	intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	338	1017	904	1920	65.0	NA	False	NA	NA
PB.10076.1	chr6	+	4038	22	full-splice_match	TTK	ENST00000369798.6	3010	22	24	-1052	-21	1052	multi-exon	TRUE	canonical	1	106230	junction_1	54112.89023543885	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	88	2661	20.0	-21	True	NA	NA
PB.10076.6	chr6	+	2755	22	full-splice_match	TTK	ENST00000369798.6	3010	22	45	210	0	-210	multi-exon	FALSE	canonical	1	106230	junction_1	54112.89023543885	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	67	2640	60.0	0	True	NA	NA
PB.10076.4	chr6	+	3151	21	novel_in_catalog	TTK	novel	3725	22	NA	NA	-6	0	intron_retention	FALSE	canonical	1	106230	junction_1	54348.17608935925	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	988	2826	25.0	-6	True	AATAAA	-30
PB.10076.5	chr6	+	2965	22	full-splice_match	TTK	ENST00000369798.6	3010	22	45	0	0	0	multi-exon	FALSE	canonical	1	106230	junction_1	54112.89023543885	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	67	2640	25.0	0	True	AATAAA	-30
PB.10338.19	chr6	-	5833	23	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	-6	any annotated donor/acceptor	FALSE	canonical	1	106	junction_7	142228.95085500742	NA	5	NA	TRUE	NA	NA	NA	C	coding	817	2454	146	2599	15.0	-1	True	AATAAA	-21
PB.10338.18	chr6	-	10597	19	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-3	-6	intron_retention	FALSE	canonical	1	259346	junction_10	81477.21242794071	NA	59	1	TRUE	NA	NA	NA	C	coding	761	2286	141	2426	15.0	4	True	AATAAA	-21
PB.11801.3	chr9	+	2655	27	novel_not_in_catalog	LRSAM1	novel	3146	26	NA	NA	3	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_26	45746.00840615664	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	343	2514	15.0	6	True	AATAAA	-16
PB.1061.2	chr1	+	3096	1	genic	CDK18	novel	NA	NA	NA	NA	-57	-15646	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	173	522	879	1400	100.0	-7779	False	NA	NA
PB.10338.11	chr6	-	5663	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-10	-5	any annotated donor/acceptor	FALSE	canonical	1	880	junction_19	123503.54676038482	NA	6	1	TRUE	NA	NA	NA	C	coding	897	2694	933	3626	10.0	-3	True	AATAAA	-22
PB.10338.16	chr6	-	5780	23	full-splice_match	THBS2	ENST00000366787.7	5811	23	25	6	25	-6	multi-exon	FALSE	canonical	1	28255	junction_22	118378.6012569923	NA	107	7	TRUE	NA	NA	NA	C	coding	1172	3519	226	3744	15.0	-174	False	AATAAA	-21
PB.9521.2	chr5	-	1090	1	full-splice_match	TAF7	ENST00000313368.7	2334	1	44	1200	4	212	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	119	357	734	1090	65.0	6	True	NA	NA
PB.9521.1	chr5	-	1959	1	full-splice_match	TAF7	ENST00000313368.7	2334	1	366	9	190	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	349	1050	412	1461	20.0	328	False	AATAAA	-18
PB.11801.2	chr9	+	3120	26	full-splice_match	LRSAM1	ENST00000300417.10	3146	26	24	2	-3	0	multi-exon	TRUE	canonical	1	84186	junction_1	31576.262280491657	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	349	2520	15.0	0	True	AATAAA	-16
PB.3978.2	chr15	-	2588	7	novel_not_in_catalog	CYP1A1	novel	2402	7	NA	NA	-12857	-8	intron_retention	FALSE	canonical	1	1044	junction_6	22193.374206430773	NA	0	NA	TRUE	NA	NA	NA	B	coding	506	1521	129	1649	35.0	NA	False	AATAAA	-13
PB.1022.10	chr1	+	2936	26	incomplete-splice_match	PTPRC	ENST00000442510.7	5390	33	34	13324	-5	8900	3prime_fragment	FALSE	canonical	1	197273	junction_3	333664.35844483	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2796	141	2936	45.0	-54	True	NA	NA
PB.3978.1	chr15	-	2523	8	novel_not_in_catalog	CYP1A1	novel	2402	7	NA	NA	3	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	22721.94311807915	NA	7	1	TRUE	NA	NA	NA	B	coding	484	1455	123	1577	30.0	-6	True	AATAAA	-20
PB.3804.8	chr15	-	2330	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-5	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	217588.637727058	NA	0	NA	TRUE	NA	NA	NA	B	coding	414	1245	535	1779	90.0	-19	True	AAAAAG	-41
PB.11801.1	chr9	+	2976	25	full-splice_match	LRSAM1	ENST00000323301.8	3376	25	402	-2	-16	0	multi-exon	FALSE	canonical	1	107193	junction_1	26072.946260304154	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	203	2374	15.0	-7321	False	AATAAA	-18
PB.2958.9	chr12	+	1757	5	full-splice_match	MLEC	ENST00000228506.7	6626	5	284	4585	-92	589	multi-exon	FALSE	canonical	1	725766	junction_1	192361.382142278	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	145	1023	10.0	-2	True	NA	NA
PB.2958.8	chr12	+	6074	6	novel_not_in_catalog	MLEC	novel	6626	5	NA	NA	-93	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	451470.92858008033	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	134	763	20.0	-3	True	AATAAA	-13
PB.2958.3	chr12	+	1565	5	full-splice_match	MLEC	ENST00000228506.7	6626	5	267	4794	-109	380	multi-exon	FALSE	canonical	1	725766	junction_1	192361.382142278	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	162	1040	80.0	-19	True	AAAAAG	-11
PB.2958.2	chr12	+	4724	1	novel_in_catalog	MLEC	novel	6626	5	NA	NA	-110	-4495	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	139	420	163	582	70.0	-20	True	NA	NA
PB.2958.1	chr12	+	2444	6	novel_in_catalog	MLEC	novel	6626	5	NA	NA	-123	-7	combination_of_known_junctions	FALSE	canonical	1	14849	junction_5	445985.2991456108	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	176	1306	15.0	-33	True	AATAAA	-14
PB.2958.7	chr12	+	1477	4	novel_in_catalog	MLEC	novel	6626	5	NA	NA	-100	359	combination_of_known_junctions	FALSE	canonical	1	20265	junction_3	463666.88382285833	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	153	983	65.0	-10	True	NA	NA
PB.2958.6	chr12	+	6725	5	novel_not_in_catalog	MLEC	novel	6626	5	NA	NA	-105	-53	any annotated donor/acceptor	FALSE	canonical	1	16408	junction_1	494009.4623321374	NA	4	NA	TRUE	NA	NA	NA	C	coding	209	630	6004	6633	80.0	-15	True	NA	NA
PB.2958.5	chr12	+	6226	5	full-splice_match	MLEC	ENST00000228506.7	6626	5	393	7	17	-7	multi-exon	FALSE	canonical	1	725766	junction_1	192361.382142278	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	36	914	15.0	-7628	False	AATAAA	-14
PB.2958.4	chr12	+	1183	5	full-splice_match	MLEC	ENST00000228506.7	6626	5	269	5174	-107	0	multi-exon	FALSE	canonical	1	725766	junction_1	192361.382142278	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	160	1038	35.0	-17	True	ATTAAA	-17
PB.6920.5	chr2	-	3606	28	full-splice_match	ANKRD44	ENST00000282272.14	5147	28	-124	1665	-3	-1665	multi-exon	FALSE	canonical	1	19336	junction_1	43021.0444190758	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2982	187	3168	75.0	-11	True	NA	NA
PB.7110.49	chr2	+	3337	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	72667	junction_1	995167.6462351908	NA	5	NA	TRUE	NA	NA	NA	C	coding	361	1086	166	1251	25.0	-10	True	AATAAA	-19
PB.7110.48	chr2	+	3230	13	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	56559	junction_3	1136569.0114660757	NA	4	NA	TRUE	NA	NA	NA	C	coding	194	585	559	1143	25.0	-23	True	AATAAA	-20
PB.7110.45	chr2	+	4705	11	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-1	intron_retention	FALSE	canonical	1	34147	junction_4	1051592.6640567868	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	2035	2619	25.0	-24	True	AATAAA	-19
PB.7110.44	chr2	+	1904	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	4	-73	no_combination_of_known_junctions	FALSE	canonical	1	7364	junction_2	1025813.3069514349	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	203	1288	40.0	-29	True	AATAAA	-18
PB.7110.47	chr2	+	3280	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4810	junction_5	1064397.9041502941	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	78	1193	25.0	-23	True	AATAAA	-20
PB.7110.46	chr2	+	3052	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-300	combination_of_known_junctions	FALSE	canonical	1	72667	junction_1	995167.6462351908	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	180	1265	65.0	-24	True	NA	NA
PB.1643.20	chr10	-	2312	21	full-splice_match	XPNPEP1	ENST00000502935.5	2539	21	42	185	0	103	multi-exon	FALSE	canonical	1	338057	junction_19	119183.63491440425	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	79	2079	30.0	41	False	AATAAA	-14
PB.1643.21	chr10	-	2680	14	incomplete-splice_match	XPNPEP1	ENST00000502935.5	2539	21	84	11699	1	-941	3prime_fragment	FALSE	canonical	1	338057	junction_12	116519.72238275307	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	37	1359	5.0	-14	True	ATTAAA	-36
PB.3098.19	chr13	-	3665	2	incomplete-splice_match	N4BP2L2	ENST00000483088.1	716	3	31	-2887	-2	2887	intron_retention	FALSE	canonical	1	640521	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	178	1440	100.0	-3	True	NA	NA
PB.7110.42	chr2	+	3393	14	full-splice_match	SEPT2	ENST00000616972.4	3446	14	53	0	1	0	multi-exon	FALSE	canonical	1	3666	junction_2	1026347.7669922147	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	221	1306	25.0	-32	True	AATAAA	-20
PB.5861.3	chr19	+	4296	14	novel_not_in_catalog	GATAD2A	novel	640	3	NA	NA	-43	-90	any annotated donor/acceptor	TRUE	canonical	1	2278	junction_2	259718.1624905495	NA	4	NA	TRUE	NA	NA	NA	B	coding	634	1905	615	2519	90.0	-46	True	NA	NA
PB.5861.2	chr19	+	4048	13	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	11371	junction_1	230006.41412680698	NA	4	1	TRUE	NA	NA	NA	B	coding	634	1905	278	2182	15.0	-17	True	AATAAA	-16
PB.5861.7	chr19	+	3054	12	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-28	714	combination_of_known_junctions	FALSE	canonical	1	51240	junction_1	185357.12319677687	NA	0	NA	TRUE	NA	NA	NA	B	coding	634	1905	203	2107	25.0	-31	True	ATTAAA	-21
PB.5861.6	chr19	+	3613	12	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-28	-361	combination_of_known_junctions	FALSE	canonical	1	51240	junction_1	185357.12319677687	NA	0	NA	TRUE	NA	NA	NA	B	coding	634	1905	203	2107	15.0	-31	True	AATAAA	-19
PB.5861.5	chr19	+	3976	12	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-25	5	combination_of_known_junctions	FALSE	canonical	1	51240	junction_1	185357.12319677687	NA	1	NA	TRUE	NA	NA	NA	B	coding	634	1905	200	2104	10.0	-28	True	AATAAA	-22
PB.5861.4	chr19	+	4012	14	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-41	-361	no_combination_of_known_junctions	FALSE	canonical	1	3047	junction_1	256594.19029002142	NA	2	NA	TRUE	NA	NA	NA	B	coding	634	1905	602	2506	15.0	-44	True	AATAAA	-19
PB.234.11	chr1	-	3980	1	novel_in_catalog	SRSF4	novel	2387	6	NA	NA	-7	-18534	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.5861.9	chr19	+	3524	11	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-14	-361	combination_of_known_junctions	FALSE	canonical	1	35908	junction_9	245289.27623522395	NA	1	NA	TRUE	NA	NA	NA	B	coding	609	1830	189	2018	15.0	-17	True	AATAAA	-19
PB.5861.8	chr19	+	5557	12	novel_in_catalog	GATAD2A	novel	640	3	NA	NA	-27	-2	combination_of_known_junctions	FALSE	canonical	1	51240	junction_1	185357.12319677687	NA	4	NA	TRUE	NA	NA	NA	B	coding	634	1905	202	2106	15.0	-30	True	AATAAA	-14
PB.11643.1	chr9	-	1555	10	full-splice_match	AUH	ENST00000375731.8	1577	10	5	17	5	-17	multi-exon	FALSE	canonical	1	139907	junction_9	47075.315491950416	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	20	1039	55.0	-13	True	AATAAA	-8
PB.627.24	chr1	-	2234	5	novel_in_catalog	PTPN22	novel	1794	8	NA	NA	-7	751	intron_retention	FALSE	canonical	1	81081	junction_2	16395.091895137397	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	121	612	80.0	-32	True	NA	NA
PB.10830.20	chr7	+	2928	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	50	1	intron_retention	FALSE	canonical	1	7502	junction_1	104306.47601898934	NA	2	1	TRUE	NA	NA	NA	C	coding	514	1545	166	1710	10.0	-1456	False	NA	NA
PB.10153.1	chr6	-	3185	10	novel_not_in_catalog	AK9	novel	6326	41	NA	NA	45	-6	intron_retention	FALSE	canonical	0	0	junction_1	27591.325114612508	NA	25	NA	TRUE	NA	NA	NA	B	coding	214	645	708	1352	60.0	-1	True	NA	NA
PB.10153.2	chr6	-	2532	12	novel_not_in_catalog	AK9	novel	6326	41	NA	NA	15	-6	any annotated donor/acceptor	FALSE	canonical	1	1684	junction_1	20297.359256239703	NA	1	1	TRUE	NA	NA	NA	B	coding	358	1077	63	1139	60.0	4	True	NA	NA
PB.11777.8	chr9	+	3387	26	full-splice_match	RABGAP1	ENST00000373647.8	4997	26	11	1599	0	-1	multi-exon	FALSE	canonical	1	51684	junction_1	93509.29303348625	NA	0	NA	TRUE	NA	NA	NA	C	coding	1069	3210	124	3333	15.0	0	True	AAAACA	-20
PB.12062.3	chrX	+	2481	6	novel_not_in_catalog	TBC1D25	novel	4042	6	NA	NA	-45	1326	any annotated donor/acceptor	FALSE	canonical	1	9230	junction_2	74640.23149106653	NA	2	1	TRUE	NA	NA	NA	C	coding	630	1893	352	2244	15.0	-37	True	NA	NA
PB.12062.2	chrX	+	2543	5	novel_in_catalog	TBC1D25	novel	4042	6	NA	NA	-45	1326	intron_retention	FALSE	canonical	1	84908	junction_2	61520.4749468622	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	1002	2306	15.0	-37	True	NA	NA
PB.12062.1	chrX	+	3770	6	full-splice_match	TBC1D25	ENST00000376771.8	4042	6	272	0	-8	0	multi-exon	FALSE	canonical	1	84908	junction_2	56849.71926403859	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	70	2136	15.0	0	True	AGTAAA	-15
PB.5060.1	chr17	+	2261	9	incomplete-splice_match	LRRC37A2	ENST00000333412.3	5177	14	27466	7	-7049	0	5prime_fragment	FALSE	canonical	1	175	junction_4	29130.37131344836	NA	0	NA	TRUE	NA	NA	NA	A	coding	706	2121	77	2197	50.0	NA	False	AATAAA	-15
PB.3098.18	chr13	-	2019	4	novel_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-2	18	combination_of_known_junctions	FALSE	canonical	1	74075	junction_3	232474.41408177945	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	85	1527	90.0	-3	True	NA	NA
PB.12062.6	chrX	+	2399	6	full-splice_match	TBC1D25	ENST00000376771.8	4042	6	244	1399	-36	1324	multi-exon	FALSE	canonical	1	84908	junction_2	56849.71926403859	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	98	2164	15.0	-28	True	NA	NA
PB.12062.5	chrX	+	3645	5	full-splice_match	TBC1D25	ENST00000481090.6	884	5	-38	-2723	-38	0	multi-exon	FALSE	canonical	1	28662	junction_2	75114.170111238	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	707	2011	15.0	-30	True	AGTAAA	-15
PB.12062.4	chrX	+	2258	5	full-splice_match	TBC1D25	ENST00000481090.6	884	5	-40	-1334	-40	1334	multi-exon	FALSE	canonical	1	28662	junction_2	75114.170111238	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	709	2013	0.0	-32	True	NA	NA
PB.1698.11	chr10	+	6116	6	novel_in_catalog	BUB3	novel	7828	8	NA	NA	0	-2	intron_retention	FALSE	canonical	1	799250	junction_3	557759.7882104446	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	85	546	25.0	0	True	AATAAA	-19
PB.1698.10	chr10	+	3557	7	novel_not_in_catalog	BUB3	novel	7828	8	NA	NA	0	-2	intron_retention	FALSE	canonical	1	15379	junction_1	671962.5085659334	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	196	1026	25.0	0	True	AATAAA	-19
PB.1698.13	chr10	+	2565	8	novel_not_in_catalog	BUB3	novel	7828	8	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	15379	junction_1	637261.6849092591	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	196	1038	25.0	0	True	AATAAA	-18
PB.1698.12	chr10	+	2953	8	novel_not_in_catalog	BUB3	novel	7828	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	164	junction_7	741839.9603634196	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	85	1260	20.0	0	True	NA	NA
PB.1698.15	chr10	+	1127	8	full-splice_match	BUB3	ENST00000368865.8	7828	8	126	6575	1	651	multi-exon	FALSE	canonical	1	799250	junction_3	548304.5224230336	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	84	1070	30.0	1	True	AATAAA	-17
PB.1698.14	chr10	+	1393	8	full-splice_match	BUB3	ENST00000368865.8	7828	8	126	6309	1	917	multi-exon	FALSE	canonical	1	799250	junction_3	548304.5224230336	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	84	1070	40.0	1	True	AATAAA	-18
PB.10830.24	chr7	+	2844	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	431	1	intron_retention	FALSE	canonical	1	7377	junction_1	107074.4749356727	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	135	1631	25.0	1	True	NA	NA
PB.4324.1	chr16	+	2403	8	full-splice_match	KDM8	ENST00000286096.8	2462	8	9	50	-4	-4	multi-exon	FALSE	canonical	1	25167	junction_2	10480.369947902505	NA	0	NA	TRUE	NA	NA	NA	A	coding	416	1251	165	1415	5.0	9	True	NA	NA
PB.2463.4	chr12	+	1878	4	full-splice_match	GABARAPL1	ENST00000266458.9	1957	4	73	6	1	1	multi-exon	FALSE	canonical	1	358712	junction_1	153831.87397285388	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	253	606	40.0	1	True	AATAAA	-17
PB.3382.11	chr14	-	1183	8	incomplete-splice_match	BAZ1A	ENST00000360310.5	6010	27	321	48382	321	9823	3prime_fragment	FALSE	canonical	1	169898	junction_7	74932.52814175087	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	936	248	1183	60.0	12	True	GATAAA	-7
PB.3382.10	chr14	-	1288	9	incomplete-splice_match	BAZ1A	ENST00000360310.5	6010	27	291	47604	291	10601	3prime_fragment	FALSE	canonical	1	169898	junction_8	81118.33764775	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1011	278	1288	80.0	3	True	ATTAAA	-29
PB.2463.1	chr12	+	3153	3	full-splice_match	GABARAPL1	ENST00000421801.6	855	3	5	-2303	5	4	multi-exon	FALSE	canonical	1	358712	junction_1	98197.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	146	441	290	730	20.0	-9294	False	AATAAA	-27
PB.2463.2	chr12	+	3481	4	full-splice_match	GABARAPL1	ENST00000541960.5	3214	4	-264	-3	6	1	multi-exon	FALSE	canonical	1	44118	junction_1	292783.2587886283	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	289	600	25.0	-9293	False	AATAAA	-24
PB.2463.3	chr12	+	2269	7	novel_in_catalog	GABARAPL1	novel	760	4	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	8867	junction_1	299687.1438932423	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	2	316	40.0	-9286	False	AATAAA	-15
PB.4091.5	chr15	+	3720	25	incomplete-splice_match	CHD2	ENST00000635856.1	4236	29	0	8824	0	5198	3prime_fragment	TRUE	canonical	1	210330	junction_13	71016.8265451219	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3147	573	3719	65.0	0	True	NA	NA
PB.4091.4	chr15	+	4852	20	incomplete-splice_match	CHD2	ENST00000635856.1	4236	29	0	16582	0	-2554	3prime_fragment	FALSE	canonical	1	210330	junction_13	67715.2098563067	NA	2	NA	TRUE	NA	NA	NA	C	coding	891	2676	573	3248	80.0	0	True	NA	NA
PB.4091.7	chr15	+	1640	2	full-splice_match	CHD2	ENST00000627622.1	1740	2	3	97	0	-97	multi-exon	FALSE	canonical	1	292534	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-26
PB.4091.6	chr15	+	2236	13	full-splice_match	CHD2	ENST00000420239.6	2221	13	-11	-4	0	4	multi-exon	FALSE	canonical	1	272426	junction_10	49842.22301729283	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	573	2078	15.0	0	True	AATAAA	-21
PB.4091.1	chr15	+	4831	33	incomplete-splice_match	CHD2	ENST00000626874.2	7764	38	135	19864	0	64	3prime_fragment	FALSE	canonical	1	210330	junction_13	67881.88796996008	NA	1	NA	TRUE	NA	NA	NA	C	coding	1419	4257	573	4829	65.0	0	True	NA	NA
PB.4091.3	chr15	+	2120	12	novel_in_catalog	AC013394.1	novel	808	7	NA	NA	14118	-3	no_combination_of_known_junctions	FALSE	canonical	1	11020	junction_5	105698.24030224787	NA	0	NA	TRUE	NA	NA	NA	B	coding	465	1398	576	1973	30.0	-3	True	AATAAA	-10
PB.4091.2	chr15	+	1980	1	novel_in_catalog	AC013394.1	novel	808	7	NA	NA	14112	-25036	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-9	True	AATAAA	-15
PB.609.1	chr1	+	2221	9	full-splice_match	CEPT1	ENST00000545121.5	2251	9	29	1	1	1	multi-exon	FALSE	canonical	1	21278	junction_1	126010.34846981567	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	180	1430	10.0	-6071	False	AATAAA	-20
PB.4091.8	chr15	+	2092	12	novel_in_catalog	AC013394.1	novel	808	7	NA	NA	14123	-1	no_combination_of_known_junctions	FALSE	canonical	1	22288	junction_1	107459.40653594665	NA	0	NA	TRUE	NA	NA	NA	B	coding	403	1212	732	1943	25.0	2	True	AATAAA	-12
PB.8199.3	chr3	+	1554	6	full-splice_match	RPP14	ENST00000295959.9	3121	6	-16	1583	-3	717	multi-exon	FALSE	canonical	1	73130	junction_1	96680.04606204944	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	673	1179	100.0	-3	True	NA	NA
PB.679.4	chr1	-	4704	29	novel_in_catalog	ITGA10	novel	5269	30	NA	NA	31	-315	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	1129	3390	46	3435	35.0	-10	True	AGTAAA	-20
PB.679.5	chr1	-	4854	30	full-splice_match	ITGA10	ENST00000369304.7	5269	30	92	323	-7	-317	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1167	3504	84	3587	40.0	8619	False	AGTAAA	-18
PB.6868.2	chr2	+	2477	9	novel_in_catalog	RBM45	novel	1992	9	NA	NA	-8	-2148	intron_retention	FALSE	canonical	1	9035	junction_8	39535.74961802767	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	101	1087	45.0	8	True	ATTAAA	-19
PB.679.1	chr1	-	5071	29	novel_in_catalog	ITGA10	novel	5269	30	NA	NA	7	1	no_combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	91	3480	15.0	8612	False	AATAAA	-18
PB.57.2	chr1	-	6315	3	full-splice_match	KLHL21	ENST00000377663.3	6445	3	130	0	-2	0	multi-exon	FALSE	canonical	1	309009	junction_2	628.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	539	1620	55	1674	10.0	-3	True	AATAAA	-16
PB.679.3	chr1	-	4886	28	novel_not_in_catalog	ITGA10	novel	5269	30	NA	NA	47	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1090	3273	30	3302	30.0	6	True	AATAAA	-11
PB.1869.16	chr11	+	4079	7	full-splice_match	METTL15	ENST00000303459.10	4068	7	-9	-2	-9	2	multi-exon	FALSE	canonical	1	13	junction_3	17022.266931058923	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	117	938	20.0	-11	True	AATAAA	-18
PB.1869.14	chr11	+	2610	3	incomplete-splice_match	METTL15	ENST00000303459.10	4068	7	-16	120229	-16	49142	3prime_fragment	FALSE	canonical	1	39	junction_2	4019.0	NA	38	1	TRUE	NA	NA	NA	C	coding	136	411	124	534	85.0	-18	True	NA	NA
PB.1869.11	chr11	+	2160	7	full-splice_match	METTL15	ENST00000303459.10	4068	7	-22	1930	-22	-845	multi-exon	FALSE	canonical	1	13	junction_3	17022.266931058923	NA	2	NA	TRUE	NA	NA	NA	C	coding	273	822	130	951	25.0	-24	True	AATAAA	-13
PB.1869.10	chr11	+	3896	7	full-splice_match	METTL15	ENST00000303459.10	4068	7	-22	194	-22	-194	multi-exon	FALSE	canonical	1	13	junction_3	17022.266931058923	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	130	951	30.0	-24	True	AATAAA	-14
PB.10143.3	chr6	-	4406	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	-4	65	0	-2	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	6	NA	TRUE	NA	NA	NA	C	coding	334	1005	91	1095	50.0	-23	True	AATAAA	-17
PB.10143.2	chr6	-	4104	7	novel_in_catalog	OSTM1	novel	4467	6	NA	NA	11	13	combination_of_known_junctions	FALSE	canonical	1	8047	junction_1	132652.11816711494	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	76	1080	30.0	-8	True	AATAAA	-32
PB.10143.1	chr6	-	2884	8	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	15	11160	any annotated donor/acceptor	FALSE	canonical	1	1110	junction_2	155925.302243198	NA	25	2	TRUE	NA	NA	NA	C	coding	334	1005	72	1076	30.0	-4	True	GATAAA	-18
PB.10143.7	chr6	-	3152	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	290	1025	290	-962	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	172	801	95.0	271	False	NA	NA
PB.10143.6	chr6	-	4015	8	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	10	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	160729.04556998008	NA	2	NA	TRUE	NA	NA	NA	C	coding	274	825	77	901	45.0	-9	True	AATAAA	-16
PB.10143.5	chr6	-	3979	7	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	135308.66001161525	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	93	1097	45.0	-25	True	AATAAA	-16
PB.10143.4	chr6	-	3982	7	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	4	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	135308.66001161525	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	83	1087	45.0	-15	True	AATAAA	-16
PB.785.1	chr1	-	3274	11	full-splice_match	PBXIP1	ENST00000368463.7	3212	11	-58	-4	-39	0	multi-exon	FALSE	canonical	1	401181	junction_9	175364.71360079828	NA	2	NA	TRUE	NA	NA	NA	C	coding	731	2196	131	2326	10.0	7650	False	NA	NA
PB.3298.1	chr14	+	1588	1	antisense	novelGene_HNRNPC_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10143.8	chr6	-	3484	7	novel_in_catalog	OSTM1	novel	4467	6	NA	NA	10	-962	combination_of_known_junctions	FALSE	canonical	1	9521	junction_3	153828.36988778543	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	77	901	95.0	-9	True	NA	NA
PB.11294.3	chr8	-	2392	5	full-splice_match	ZFPM2-AS1	ENST00000520594.5	634	5	5	-1763	-1	1564	multi-exon	FALSE	canonical	1	1209	junction_2	10133.67872492512	NA	4	NA	TRUE	NA	NA	NA	C	coding	98	297	21	317	90.0	-1	True	TATAAA	-27
PB.11294.2	chr8	-	2584	6	novel_in_catalog	ZFPM2-AS1	novel	539	6	NA	NA	-2	1570	combination_of_known_junctions	FALSE	canonical	1	1209	junction_3	8723.056643172737	NA	4	NA	TRUE	NA	NA	NA	C	coding	98	297	52	348	100.0	74	False	TATAAA	-33
PB.785.6	chr1	-	2885	11	full-splice_match	PBXIP1	ENST00000368463.7	3212	11	-34	361	-15	-361	multi-exon	FALSE	canonical	1	401181	junction_9	175364.71360079828	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	107	2302	20.0	-40	True	AATAAA	-16
PB.785.7	chr1	-	2468	11	full-splice_match	PBXIP1	ENST00000368463.7	3212	11	-39	783	-20	-783	multi-exon	FALSE	canonical	1	401181	junction_9	175364.71360079828	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	112	2307	40.0	-45	True	NA	NA
PB.604.1	chr1	-	2469	8	full-splice_match	SLC16A4	ENST00000541986.5	2496	8	22	5	1	4	multi-exon	FALSE	canonical	1	24639	junction_6	22591.319197010707	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	282	1559	30.0	-14	True	AATAAA	-18
PB.604.2	chr1	-	2085	8	full-splice_match	SLC16A4	ENST00000369781.8	2082	8	1	-4	0	4	multi-exon	TRUE	canonical	1	11793	junction_3	27217.193650413	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	216	1175	30.0	-1	True	AATAAA	-18
PB.604.3	chr1	-	2541	9	full-splice_match	SLC16A4	ENST00000369779.8	2632	9	56	35	0	-23	multi-exon	FALSE	canonical	1	47411	junction_6	17329.97686632905	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	195	1658	70.0	-1	True	GATAAA	-12
PB.3558.1	chr14	-	856	5	full-splice_match	NPC2	ENST00000555619.5	1035	5	171	8	-2	1	multi-exon	FALSE	canonical	1	2488161	junction_4	347851.4872686331	NA	0	NA	TRUE	NA	NA	NA	A	coding	151	456	68	523	5.0	-3	True	AATAAA	-28
PB.989.3	chr1	-	5433	20	full-splice_match	EDEM3	ENST00000318130.12	6898	20	51	1414	11	-1142	multi-exon	FALSE	canonical	1	96207	junction_19	44966.40902069084	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	217	3015	10.0	-5	True	ATTAAA	-12
PB.11779.5	chr9	-	2038	22	novel_not_in_catalog	DENND1A	novel	4800	18	NA	NA	118	-42	any annotated donor/acceptor	FALSE	canonical	1	13800	junction_2	82267.1120560662	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	85	1818	15.0	-3	True	AATAAA	-17
PB.7968.3	chr3	+	3811	6	novel_not_in_catalog	PLCL2	novel	1031	3	NA	NA	19916	8	intron_retention	FALSE	canonical	1	524	junction_1	81799.20518097961	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	23	3121	35.0	5825	False	ATTAAA	-24
PB.8498.7	chr3	-	4097	21	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50575	-29561	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	65220.812944852965	NA	0	NA	TRUE	NA	NA	NA	B	coding	777	2334	254	2587	55.0	0	True	NA	NA
PB.6742.16	chr2	-	3447	7	full-splice_match	FAM168B	ENST00000389915.3	944	7	1	-2504	1	-1987	multi-exon	FALSE	canonical	1	260786	junction_6	168629.3522034511	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	258	845	45.0	-12	True	ATTAAA	-8
PB.9992.1	chr6	-	1598	1	full-splice_match	TBCC	ENST00000372876.1	1616	1	-2	20	-2	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	346	1041	26	1066	25.0	-1	True	AATAAA	-14
PB.9992.2	chr6	-	1237	1	full-splice_match	TBCC	ENST00000372876.1	1616	1	3	376	3	-376	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	346	1041	21	1061	25.0	4	True	ATTAAA	-20
PB.6742.15	chr2	-	5322	7	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	279	-2	any annotated donor/acceptor	FALSE	canonical	1	3885	junction_6	258255.38918895554	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	148	735	20.0	12	True	AATAAA	-16
PB.10437.3	chr7	-	2113	1	novel_in_catalog	TRA2A	novel	1845	8	NA	NA	0	-13474	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-6	True	NA	NA
PB.10437.2	chr7	-	1571	8	full-splice_match	TRA2A	ENST00000297071.8	1845	8	49	225	-11	-221	multi-exon	FALSE	canonical	1	153761	junction_3	336985.54127985	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	169	1017	45.0	10	False	AATACA	-13
PB.10437.1	chr7	-	1783	8	full-splice_match	TRA2A	ENST00000297071.8	1845	8	58	4	-2	0	multi-exon	FALSE	canonical	1	153761	junction_3	336985.54127985	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	160	1008	30.0	-8	True	AATAAA	-15
PB.6742.11	chr2	-	5456	8	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	15	-1	any annotated donor/acceptor	FALSE	canonical	1	849	junction_7	299854.8966245412	NA	1	1	TRUE	NA	NA	NA	C	coding	195	588	281	868	20.0	2	True	AATAAA	-17
PB.2572.3	chr12	+	3289	26	novel_in_catalog	PFKM	novel	3003	23	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	3159	junction_3	360196.72432280664	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	242	2893	5.0	-266	False	AATAAA	-19
PB.2572.2	chr12	+	3317	22	novel_in_catalog	PFKM	novel	3003	23	NA	NA	11	0	intron_retention	FALSE	canonical	1	4085	junction_1	254993.33424115126	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	1524	2921	5.0	12	True	AATAAA	-19
PB.2572.1	chr12	+	3311	25	novel_in_catalog	PFKM	novel	3003	23	NA	NA	-21	0	no_combination_of_known_junctions	FALSE	canonical	1	1419	junction_1	332554.40669714106	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	150	2915	5.0	-711	False	AATAAA	-19
PB.6029.1	chr19	+	3998	3	full-splice_match	ZNF526	ENST00000301215.7	4023	3	25	0	25	0	multi-exon	FALSE	canonical	1	87808	junction_1	20497.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	201	2213	90.0	-29	True	NA	NA
PB.2572.7	chr12	+	2807	23	full-splice_match	PFKM	ENST00000359794.10	3224	23	117	300	-1	0	multi-exon	FALSE	canonical	1	521765	junction_1	187273.67473505362	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	69	2411	5.0	-17	True	AATAAA	-19
PB.2572.6	chr12	+	3066	22	full-splice_match	PFKM	ENST00000546964.5	3063	22	-3	0	-3	0	multi-exon	FALSE	canonical	1	521765	junction_1	187627.79123505673	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	1273	2670	5.0	-24	True	AATAAA	-19
PB.2572.5	chr12	+	2706	22	novel_in_catalog	PFKM	novel	3003	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	61049	junction_9	256299.70328896912	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	61	2310	5.0	-9	True	AATAAA	-19
PB.2572.4	chr12	+	2962	23	novel_in_catalog	PFKM	novel	3003	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6812	junction_1	250913.414962016	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	125	2566	5.0	-249	False	AATAAA	-19
PB.11693.8	chr9	+	3356	4	novel_not_in_catalog	ZNF189	novel	3134	3	NA	NA	-14	-7	any annotated donor/acceptor	FALSE	canonical	1	465	junction_2	56695.063326144686	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	601	2352	20.0	-31	True	ATTAAA	-16
PB.6910.23	chr2	-	4148	25	novel_not_in_catalog	STAT1	novel	663	3	NA	NA	-2	-116	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	391248.82231587043	NA	5	2	TRUE	NA	NA	NA	C	coding	762	2289	309	2597	20.0	-11	True	ATTAAA	-14
PB.2572.9	chr12	+	2656	22	novel_in_catalog	PFKM	novel	3003	23	NA	NA	-2	1	no_combination_of_known_junctions	FALSE	canonical	1	6034	junction_16	262196.7755763415	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	70	2259	10.0	-18	True	AATAAA	-20
PB.2572.8	chr12	+	3248	22	novel_in_catalog	PFKM	novel	3003	23	NA	NA	-8	6	intron_retention	FALSE	canonical	1	9199	junction_11	263743.3588865374	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	1542	2846	10.0	-3371	False	AATAAA	-25
PB.6910.25	chr2	-	3917	24	full-splice_match	STAT1	ENST00000540176.5	4216	24	71	228	-11	-228	multi-exon	FALSE	canonical	1	21148	junction_17	384804.9340570643	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	1198	2478	10.0	-20	True	ATTAAA	-43
PB.894.1	chr1	-	2150	10	full-splice_match	RXRG	ENST00000359842.9	2041	10	-116	7	43	-1	multi-exon	FALSE	canonical	1	21558	junction_9	4044.6048594560884	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	420	1811	15.0	-84	False	AATAAA	-20
PB.11932.2	chr9	+	4968	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	1	15705	junction_10	108381.02048647447	NA	2	NA	TRUE	NA	NA	NA	C	coding	1264	3795	3	3797	30.0	-26	False	AATAAA	-17
PB.11932.3	chr9	+	5087	27	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	133861	junction_1	83709.3380101682	NA	0	NA	TRUE	NA	NA	NA	C	coding	1291	3876	41	3916	30.0	-22	True	AATAAA	-17
PB.11932.4	chr9	+	4629	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-2	-31	combination_of_known_junctions	FALSE	canonical	1	25745	junction_1	95795.36006904718	NA	1	NA	TRUE	NA	NA	NA	C	coding	1267	3804	69	3872	80.0	-21	True	AATAAA	-36
PB.8348.1	chr3	+	7675	17	full-splice_match	PARP14	ENST00000474629.6	7915	17	239	1	-2	-1	multi-exon	FALSE	canonical	1	220702	junction_1	102087.50895119038	NA	1	NA	TRUE	NA	NA	NA	C	coding	1801	5406	28	5433	35.0	-2	True	AATAAA	-17
PB.11932.6	chr9	+	5105	27	full-splice_match	EHMT1	ENST00000460843.5	5137	27	29	3	0	-3	multi-exon	FALSE	canonical	1	133861	junction_1	85949.87681449878	NA	0	NA	TRUE	NA	NA	NA	C	coding	1298	3897	38	3934	30.0	-19	True	AATAAA	-17
PB.11932.7	chr9	+	4612	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	0	-31	combination_of_known_junctions	FALSE	canonical	1	65644	junction_6	101840.86042995512	NA	2	NA	TRUE	NA	NA	NA	C	coding	1272	3819	37	3855	80.0	-18	True	AATAAA	-36
PB.11932.8	chr9	+	5005	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	65644	junction_6	99956.0684949463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1265	3798	37	3834	30.0	-18	True	AATAAA	-17
PB.11932.9	chr9	+	4692	27	full-splice_match	EHMT1	ENST00000460843.5	5137	27	32	413	2	-27	multi-exon	FALSE	canonical	1	133861	junction_1	85949.87681449878	NA	0	NA	TRUE	NA	NA	NA	C	coding	1298	3897	35	3931	80.0	-16	True	AATAAA	-40
PB.328.1	chr1	+	2079	5	full-splice_match	ZNF684	ENST00000372699.7	2097	5	13	5	1	-5	multi-exon	FALSE	canonical	1	32165	junction_1	17403.081858897865	NA	1	NA	TRUE	NA	NA	NA	A	coding	378	1137	239	1375	20.0	-295	False	AATAAA	-14
PB.11514.4	chr9	+	2272	6	novel_in_catalog	GALT	novel	678	2	NA	NA	0	-4	intron_retention	FALSE	canonical	1	17350	junction_2	132654.73025474817	NA	0	NA	TRUE	NA	NA	NA	B	coding	87	264	42	305	40.0	-11	True	AATAAA	-33
PB.10427.1	chr7	-	2883	10	full-splice_match	CDCA7L	ENST00000406877.7	3066	10	186	-3	5	2	multi-exon	FALSE	canonical	1	223242	junction_8	69413.18727699095	NA	4	NA	TRUE	NA	NA	NA	C	coding	454	1365	95	1459	10.0	-18	True	AATAAA	-27
PB.10427.2	chr7	-	3394	10	novel_not_in_catalog	CDCA7L	novel	2915	11	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	1232	junction_4	139134.08440284242	NA	5	NA	TRUE	NA	NA	NA	C	coding	343	1032	95	1126	15.0	-18	True	AATAAA	-25
PB.894.2	chr1	-	1695	10	full-splice_match	RXRG	ENST00000359842.9	2041	10	148	198	124	-192	multi-exon	FALSE	canonical	1	21558	junction_9	4044.6048594560884	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	156	1547	25.0	-1	True	AATAAA	-19
PB.10427.4	chr7	-	2784	9	full-splice_match	CDCA7L	ENST00000373934.4	1830	9	-56	-898	-37	0	multi-exon	FALSE	canonical	1	89034	junction_7	115530.37749920743	NA	5	NA	TRUE	NA	NA	NA	C	coding	408	1227	137	1363	10.0	3309	False	AATAAA	-24
PB.10427.5	chr7	-	3525	9	novel_in_catalog	CDCA7L	novel	2915	11	NA	NA	4	-10	intron_retention	FALSE	canonical	1	151194	junction_7	90211.11155289783	NA	6	NA	TRUE	NA	NA	NA	C	coding	310	933	96	1028	10.0	-19	True	AATAAA	-14
PB.8003.5	chr3	+	2553	17	novel_not_in_catalog	FBXL2	novel	558	8	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	541	junction_6	43986.20043294651	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	1135	1536	60.0	25	True	AATAAA	-16
PB.9713.13	chr6	-	3520	15	full-splice_match	F13A1	ENST00000264870.7	3999	15	172	307	-20	-307	multi-exon	FALSE	canonical	1	240507	junction_9	52698.93605076532	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	95	2293	60.0	-1	True	NA	NA
PB.9713.12	chr6	-	3726	15	full-splice_match	F13A1	ENST00000264870.7	3999	15	172	101	-20	-101	multi-exon	FALSE	canonical	1	240507	junction_9	52698.93605076532	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	95	2293	40.0	-1	True	NA	NA
PB.9713.10	chr6	-	3634	16	novel_not_in_catalog	F13A1	novel	3999	15	NA	NA	-19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	92109.05187343003	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	94	2292	25.0	0	True	AATAAA	-15
PB.12119.27	chrX	-	2624	5	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-25	-458	any annotated donor/acceptor	FALSE	canonical	1	8342	junction_3	16274.559462163637	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	99	620	65.0	11	True	AATGAA	-6
PB.12119.26	chrX	-	2638	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-69	-458	any annotated donor/acceptor	FALSE	canonical	1	13930	junction_1	16001.729298908776	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	127	747	65.0	155	False	AATGAA	-6
PB.12119.25	chrX	-	2713	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-53	-458	any annotated donor/acceptor	FALSE	canonical	1	12617	junction_2	16692.075698932378	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	111	806	65.0	171	False	AATGAA	-6
PB.12119.24	chrX	-	2901	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-37	-458	any annotated donor/acceptor	FALSE	canonical	1	15710	junction_2	12486.967909918458	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	445	897	65.0	-1	True	AATGAA	-6
PB.12119.23	chrX	-	3010	7	novel_in_catalog	EDA2R	novel	3418	7	NA	NA	2	-458	no_combination_of_known_junctions	FALSE	canonical	1	9904	junction_2	16393.09695844226	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	107	1006	65.0	-31	True	AATGAA	-6
PB.8415.4	chr3	+	3541	16	full-splice_match	EPHB1	ENST00000398015.7	4672	16	-2	1133	-2	-36	multi-exon	FALSE	canonical	1	18333	junction_1	11700.11838496612	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	373	3327	75.0	0	True	AATATA	-2
PB.12119.21	chrX	-	3053	8	novel_in_catalog	EDA2R	novel	3418	7	NA	NA	-35	-458	combination_of_known_junctions	FALSE	canonical	1	771	junction_2	20831.907178505706	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	93	1049	65.0	1	True	AATGAA	-6
PB.12119.20	chrX	-	3356	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	16	-1	any annotated donor/acceptor	FALSE	canonical	1	15469	junction_6	15034.299961532408	NA	3	NA	TRUE	NA	NA	NA	C	coding	150	453	443	895	30.0	-17	True	AATAAA	-13
PB.827.3	chr1	-	1441	8	full-splice_match	GPATCH4	ENST00000368232.8	1972	8	4	527	0	199	multi-exon	FALSE	canonical	1	451356	junction_7	69893.93410368168	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	130	1242	70.0	-9	True	NA	NA
PB.827.2	chr1	-	1964	8	full-splice_match	GPATCH4	ENST00000368232.8	1972	8	4	4	0	-4	multi-exon	FALSE	canonical	1	451356	junction_7	69893.93410368168	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	130	1242	25.0	-9	True	AATAAA	-28
PB.827.1	chr1	-	2165	8	full-splice_match	GPATCH4	ENST00000368232.8	1972	8	-1	-192	-1	192	multi-exon	TRUE	canonical	1	451356	junction_7	69893.93410368168	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	135	1247	30.0	-14	True	AATGAA	-37
PB.12119.28	chrX	-	2530	6	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-53	-458	any annotated donor/acceptor	FALSE	canonical	1	2985	junction_1	18455.122122597837	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	111	623	65.0	171	False	AATGAA	-6
PB.8068.9	chr3	+	3443	13	incomplete-splice_match	SACM1L	ENST00000389061.9	3723	20	122	11012	27	-4217	3prime_fragment	FALSE	canonical	1	249581	junction_4	65395.64061472081	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	83	1186	90.0	-12	True	NA	NA
PB.8068.8	chr3	+	2459	4	full-splice_match	SACM1L	ENST00000463347.5	854	4	26	-1631	25	-694	multi-exon	FALSE	canonical	1	278005	junction_3	34939.75746274658	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	85	441	20.0	-14	True	AATAAA	-22
PB.8068.1	chr3	+	6244	20	novel_in_catalog	SACM1L	novel	571	6	NA	NA	0	0	intron_retention	TRUE	canonical	1	20542	junction_2	127073.53607824628	NA	43	2	TRUE	NA	NA	NA	C	coding	467	1404	3102	4505	25.0	-41	True	AATAAA	-18
PB.1018.9	chr1	-	3577	14	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	278	38260	278	-38256	3prime_fragment	FALSE	canonical	1	124963	junction_9	21354.41019982169	NA	0	NA	TRUE	NA	NA	NA	C	coding	1078	3234	343	3576	10.0	8893	False	NA	NA
PB.8068.3	chr3	+	3752	21	novel_not_in_catalog	SACM1L	novel	571	6	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	21	junction_1	130072.98186605665	NA	42	3	TRUE	NA	NA	NA	C	coding	634	1905	109	2013	25.0	-38	True	AATAAA	-18
PB.8068.2	chr3	+	3825	21	novel_not_in_catalog	SACM1L	novel	571	6	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	130013.44034252767	NA	6	NA	TRUE	NA	NA	NA	C	coding	383	1152	109	1260	25.0	-38	True	AATAAA	-17
PB.10954.3	chr7	+	2133	7	full-splice_match	DNAJB6	ENST00000443280.5	1159	7	-9	-965	6	1	multi-exon	FALSE	canonical	1	205	junction_2	179968.33073874106	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	156	791	5.0	12	True	AATAAA	-22
PB.10954.2	chr7	+	1500	8	full-splice_match	DNAJB6	ENST00000429029.6	1609	8	45	64	1	-58	multi-exon	FALSE	canonical	1	205	junction_2	77820.92505731033	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	161	886	95.0	7	True	AGTAAA	-32
PB.10954.1	chr7	+	2485	10	full-splice_match	DNAJB6	ENST00000262177.8	2527	10	41	1	3	-1	multi-exon	FALSE	canonical	1	205	junction_2	169463.33447091145	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	165	1145	5.0	3	True	AATAAA	-20
PB.8068.6	chr3	+	3474	19	full-splice_match	SACM1L	ENST00000441228.5	2013	19	15	-1476	13	3	multi-exon	FALSE	canonical	1	8860	junction_3	108840.84193928521	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	170	1732	25.0	-26	True	AATAAA	-21
PB.9641.3	chr5	+	8602	23	full-splice_match	NSD1	ENST00000439151.6	12892	23	-165	4455	-38	-2	multi-exon	FALSE	canonical	1	102807	junction_1	46020.244402161865	NA	1	NA	TRUE	NA	NA	NA	C	coding	2696	8091	211	8301	35.0	-29	True	AATAAA	-18
PB.8430.9	chr3	-	3440	23	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	-33	combination_of_known_junctions	FALSE	canonical	1	61264	junction_22	429963.8544837373	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	383	3016	30.0	-6	True	ACTAAA	-36
PB.11683.7	chr9	-	4139	1	novel_in_catalog	ALG2	novel	2966	3	NA	NA	0	-432	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	248	747	3263	4009	30.0	-1	True	AATAAA	-18
PB.11683.6	chr9	-	2023	3	full-splice_match	ALG2	ENST00000238477.5	2966	3	-1	944	-1	2	multi-exon	FALSE	canonical	1	63939	junction_2	79.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	488	1459	65.0	-2	True	AATAAA	-14
PB.11683.5	chr9	-	1841	2	full-splice_match	ALG2	ENST00000476832.1	1880	2	36	3	22	2	multi-exon	FALSE	canonical	1	205635	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	27	1277	65.0	21	True	AATAAA	-14
PB.11683.4	chr9	-	4591	1	genic	ALG2	novel	NA	NA	NA	NA	-2	13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	248	747	3265	4011	25.0	-3	True	AATAAA	-30
PB.11683.3	chr9	-	2802	2	full-splice_match	ALG2	ENST00000476832.1	1880	2	18	-940	4	-1	multi-exon	FALSE	canonical	1	205635	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	45	1295	15.0	3	True	ATTAAA	-16
PB.11683.2	chr9	-	5524	1	genic	ALG2	novel	NA	NA	NA	NA	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	248	747	3270	4016	20.0	-8	True	ATTAAA	-17
PB.11683.1	chr9	-	2983	3	full-splice_match	ALG2	ENST00000238477.5	2966	3	-17	0	-3	0	multi-exon	FALSE	canonical	1	63939	junction_2	79.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	504	1475	20.0	27	False	ATTAAA	-17
PB.12203.2	chrX	+	3212	3	novel_in_catalog	TMSB15B	novel	1666	4	NA	NA	-61	0	intron_retention	FALSE	canonical	1	11702	junction_1	48124.5	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-52	False	AATAAA	-19
PB.12203.1	chrX	+	3143	2	full-splice_match	TMSB15B	ENST00000455723.1	2002	2	1	-1142	1	1142	multi-exon	FALSE	canonical	1	5789	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	10	True	NA	NA
PB.12312.5	chrX	+	3036	3	novel_not_in_catalog	VMA21	novel	485	3	NA	NA	30	-1	any annotated donor/acceptor	FALSE	canonical	1	71	junction_2	88495.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	94	285	76	360	10.0	0	True	ATTAAA	-19
PB.12312.4	chrX	+	4714	3	full-splice_match	VMA21	ENST00000330374.6	4717	3	2	1	2	-1	multi-exon	FALSE	canonical	1	177062	junction_1	70002.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	104	409	10.0	-9	True	ATTAAA	-19
PB.3632.1	chr14	-	1156	2	full-splice_match	GON7	ENST00000306954.4	1154	2	0	-2	0	2	multi-exon	FALSE	canonical	1	236220	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	100	303	58	360	5.0	-30	True	AATATA	-16
PB.841.32	chr1	+	2761	12	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	9553	junction_11	347484.94258576835	NA	1	NA	TRUE	NA	NA	NA	C	coding	740	2223	256	2478	30.0	0	True	AATAAA	-20
PB.12312.1	chrX	+	4826	3	novel_not_in_catalog	VMA21	novel	485	3	NA	NA	-18	-2	any annotated donor/acceptor	FALSE	canonical	1	872	junction_1	158097.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-29	True	ATTAAA	-18
PB.841.34	chr1	+	2342	10	novel_in_catalog	IFI16	novel	856	3	NA	NA	101	-1	combination_of_known_junctions	FALSE	canonical	1	196353	junction_7	296694.8438679083	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	72	2093	25.0	-8196	False	AATAAA	-23
PB.12312.3	chrX	+	2800	3	full-splice_match	VMA21	ENST00000330374.6	4717	3	-8	1925	-8	-1925	multi-exon	FALSE	canonical	1	177062	junction_1	70002.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	114	419	20.0	-19	True	AATAGA	-19
PB.12312.2	chrX	+	4843	3	full-splice_match	VMA21	ENST00000330374.6	4717	3	-17	-109	-17	109	multi-exon	FALSE	canonical	1	177062	junction_1	70002.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	123	428	30.0	-28	True	NA	NA
PB.8401.2	chr3	+	5501	3	full-splice_match	NUDT16	ENST00000521288.1	6108	3	-4	611	-4	-611	multi-exon	FALSE	canonical	1	331103	junction_2	207.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	36	623	65.0	-24	True	NA	NA
PB.8401.1	chr3	+	3382	3	full-splice_match	NUDT16	ENST00000521288.1	6108	3	-9	2735	-9	2656	multi-exon	FALSE	canonical	1	331103	junction_2	207.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	195	588	41	628	25.0	-29	True	ATTAAA	-25
PB.3791.3	chr15	-	6070	37	full-splice_match	INO80	ENST00000401393.7	5991	37	-70	-9	57	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	49004.52454245368	NA	7	NA	TRUE	NA	NA	NA	C	coding	1556	4671	295	4965	20.0	20	True	AATAAA	-22
PB.3791.2	chr15	-	6323	36	full-splice_match	INO80	ENST00000648947.1	6365	36	39	3	39	-3	multi-exon	TRUE	canonical	1	17669	junction_35	41946.54928996556	NA	24	NA	TRUE	NA	NA	NA	C	coding	1556	4671	313	4983	20.0	2	True	AATAAA	-23
PB.10449.55	chr7	-	1641	11	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-3	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	4711147.653956422	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	173	1129	40.0	-4	True	AATAAA	-13
PB.8461.11	chr3	-	4373	6	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	6138	-1	any annotated donor/acceptor	FALSE	canonical	1	50	junction_5	208372.11194072972	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	76	804	15.0	6727	False	AATAAA	-16
PB.3791.4	chr15	-	4118	32	incomplete-splice_match	INO80	ENST00000401393.7	5991	37	24	6448	3	8	3prime_fragment	FALSE	canonical	1	17669	junction_31	38823.20276355338	NA	1	NA	TRUE	NA	NA	NA	C	coding	1306	3918	201	4118	30.0	438	False	NA	NA
PB.4779.4	chr17	-	1991	4	novel_not_in_catalog	COX10-AS1	novel	576	5	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	canonical	1	3071	junction_1	24132.04393885165	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	14	True	NA	NA
PB.4779.5	chr17	-	5030	2	full-splice_match	COX10-AS1	ENST00000602539.1	774	2	13	-4269	-8	-290	multi-exon	FALSE	canonical	1	58840	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	12	True	NA	NA
PB.4779.1	chr17	-	5597	3	novel_not_in_catalog	COX10-AS1	novel	576	5	NA	NA	-3	77	any annotated donor/acceptor	FALSE	canonical	1	13986	junction_1	22427.0	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	17	True	NA	NA
PB.4779.2	chr17	-	2802	3	novel_not_in_catalog	COX10-AS1	novel	576	5	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	1256	junction_1	28792.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.4779.3	chr17	-	5362	2	full-splice_match	COX10-AS1	ENST00000602539.1	774	2	-13	-4575	3	16	multi-exon	FALSE	canonical	1	58840	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-14	True	NA	NA
PB.7866.1	chr22	-	1617	1	full-splice_match	GTSE1-DT	ENST00000623117.1	1518	1	-101	2	-101	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	101	306	762	1067	20.0	-8306	False	NA	NA
PB.9033.22	chr4	+	5111	36	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	16	-3	any annotated donor/acceptor	FALSE	canonical	1	2156	junction_27	117621.02195994924	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	34	3612	15.0	5	True	AATAAA	-11
PB.7168.1	chr20	-	4635	15	novel_not_in_catalog	FERMT1	novel	3322	7	NA	NA	4	-1	any annotated donor/acceptor	TRUE	canonical	1	27925	junction_14	27327.53410995241	NA	2	NA	TRUE	NA	NA	NA	B	coding	677	2034	275	2308	10.0	3	True	AGTAAA	-18
PB.12328.1	chrX	+	2447	4	full-splice_match	DUSP9	ENST00000342782.3	2433	4	-12	-2	-12	2	multi-exon	FALSE	canonical	1	22363	junction_1	34892.74134002977	NA	3	NA	TRUE	NA	NA	NA	A	coding	384	1155	278	1432	40.0	-19	True	AATAAA	-15
PB.1342.28	chr10	-	3136	18	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	8	-5	intron_retention	FALSE	canonical	1	731222	junction_15	246610.97659501855	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	1831	2898	40.0	-1	True	AATAAA	-16
PB.1342.29	chr10	-	2804	20	novel_not_in_catalog	YME1L1	novel	4127	18	NA	NA	-6	-5	intron_retention	FALSE	canonical	1	1221	junction_17	403574.82262988406	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	1007	2566	40.0	6	True	AATAAA	-16
PB.4849.4	chr17	-	2115	5	full-splice_match	SLC46A1	ENST00000612814.4	6376	5	-19	4280	-19	310	multi-exon	FALSE	canonical	1	65961	junction_4	21810.425046007244	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	116	1495	30.0	362	False	NA	NA
PB.4849.2	chr17	-	5449	5	full-splice_match	SLC46A1	ENST00000612814.4	6376	5	-2	929	-2	-9	multi-exon	FALSE	canonical	1	65961	junction_4	21810.425046007244	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	99	1478	25.0	-1	True	NA	NA
PB.4849.3	chr17	-	2898	5	full-splice_match	SLC46A1	ENST00000612814.4	6376	5	0	3478	0	1112	multi-exon	FALSE	canonical	1	65961	junction_4	21810.425046007244	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	97	1476	20.0	1	True	AATAAA	-18
PB.4849.1	chr17	-	6495	5	full-splice_match	SLC46A1	ENST00000612814.4	6376	5	-4	-115	-4	115	multi-exon	TRUE	canonical	1	65961	junction_4	21810.425046007244	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	101	1480	10.0	-3	True	NA	NA
PB.1342.20	chr10	-	3728	20	full-splice_match	YME1L1	ENST00000326799.7	3994	20	-21	287	-9	-287	multi-exon	FALSE	canonical	1	14391	junction_17	401858.0501320366	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	171	2492	25.0	3	True	AATAAA	-16
PB.1342.21	chr10	-	3440	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	19	397	-2	-397	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	164	2314	25.0	10	True	AATAAA	-18
PB.1342.22	chr10	-	3353	18	full-splice_match	YME1L1	ENST00000613434.4	4127	18	33	741	5	-399	multi-exon	FALSE	canonical	1	46877	junction_15	340376.61223523214	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	178	2229	25.0	-4	True	AATAAA	-16
PB.1342.23	chr10	-	3228	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	8	620	8	-620	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	175	2325	80.0	-1	True	NA	NA
PB.1342.25	chr10	-	2746	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	8	1102	8	178	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	175	2325	35.0	-1	True	AATAAA	-16
PB.1342.26	chr10	-	3455	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	-884	1285	-10	-5	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	1067	3217	40.0	707	False	AATAAA	-16
PB.1342.27	chr10	-	2734	20	full-splice_match	YME1L1	ENST00000326799.7	3994	20	-24	1284	9	-4	multi-exon	FALSE	canonical	1	14391	junction_17	401858.0501320366	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	174	2495	35.0	0	True	AATAAA	-17
PB.350.2	chr1	-	1175	7	full-splice_match	MED8	ENST00000372457.8	1924	7	-3	752	-3	5	multi-exon	FALSE	canonical	1	180856	junction_6	184259.36767412035	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	48	854	15.0	0	True	NA	NA
PB.350.1	chr1	-	1961	7	full-splice_match	MED8	ENST00000372457.8	1924	7	15	-52	-9	0	multi-exon	FALSE	canonical	1	180856	junction_6	184259.36767412035	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	30	836	10.0	6	True	AATAAA	-15
PB.11128.15	chr8	-	3002	14	novel_in_catalog	RB1CC1	novel	6635	24	NA	NA	10	632	combination_of_known_junctions	FALSE	canonical	1	9000	junction_12	100196.36215768082	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2418	583	3000	75.0	-22	True	AGTAAA	-22
PB.11128.14	chr8	-	3017	15	novel_not_in_catalog	RB1CC1	novel	6635	24	NA	NA	-2	632	any annotated donor/acceptor	FALSE	canonical	1	8557	junction_11	98291.52182146531	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2337	679	3015	75.0	0	True	AGTAAA	-22
PB.11128.11	chr8	-	4043	15	novel_not_in_catalog	RB1CC1	novel	6635	24	NA	NA	1	1627	any annotated donor/acceptor	FALSE	canonical	1	8557	junction_11	98291.52182146531	NA	0	NA	TRUE	NA	NA	NA	C	coding	1111	3333	710	4042	75.0	-31	True	AGTAAA	-26
PB.11128.10	chr8	-	4119	15	incomplete-splice_match	RB1CC1	ENST00000025008.9	6635	24	-24	33802	10	1627	3prime_fragment	FALSE	canonical	1	145642	junction_14	74915.2332799395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1190	3570	549	4118	75.0	-22	True	AGTAAA	-26
PB.11128.13	chr8	-	3121	15	incomplete-splice_match	RB1CC1	ENST00000025008.9	6635	24	-21	34797	-9	632	3prime_fragment	FALSE	canonical	1	145642	junction_14	74915.2332799395	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2574	546	3119	75.0	-19	True	AGTAAA	-22
PB.11128.12	chr8	-	3626	15	incomplete-splice_match	RB1CC1	ENST00000025008.9	6635	24	-52	34323	-18	1106	3prime_fragment	FALSE	canonical	1	145642	junction_14	74915.2332799395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3048	577	3624	75.0	-50	False	NA	NA
PB.465.48	chr1	-	1927	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	-3	4752	-3	-177	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	119	1282	35.0	-1	True	NA	NA
PB.465.49	chr1	-	1939	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	-19	183	-3	-183	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	119	1300	40.0	-1	True	NA	NA
PB.501.2	chr1	-	2931	6	novel_not_in_catalog	AL359762.3	novel	2686	3	NA	NA	-17752	-54774	any annotated donor/acceptor	FALSE	canonical	1	15100	junction_3	105939.56989793757	NA	0	NA	TRUE	NA	NA	NA	B	coding	146	441	616	1056	35.0	-1	True	AATAAA	-20
PB.465.42	chr1	-	2460	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	-1	-356	-1	356	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	101	1282	30.0	1	True	TATAAA	-22
PB.8782.3	chr4	-	5751	30	full-splice_match	KDR	ENST00000263923.5	5833	30	-24	106	-24	-56	multi-exon	FALSE	canonical	1	67139	junction_29	29387.788914112	NA	1	1	TRUE	NA	NA	NA	C	coding	1356	4071	327	4397	30.0	-25	False	ATTAAA	-16
PB.465.40	chr1	-	2687	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-20	815	-7	532	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	107	1333	15.0	-5	True	ATTAAA	-41
PB.8782.1	chr4	-	5836	30	full-splice_match	KDR	ENST00000263923.5	5833	30	-1	-2	-1	2	multi-exon	FALSE	canonical	1	67139	junction_29	29387.788914112	NA	0	NA	TRUE	NA	NA	NA	C	coding	1356	4071	304	4374	25.0	-2	True	ATTAAA	-22
PB.4855.1	chr17	-	3150	2	full-splice_match	SDF2	ENST00000585428.1	924	2	-8	-2218	-8	2218	multi-exon	FALSE	canonical	1	18965	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	227	False	NA	NA
PB.465.47	chr1	-	2251	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-9	1240	4	107	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	96	1322	35.0	22	False	TTTAAA	-10
PB.8782.4	chr4	-	1795	11	incomplete-splice_match	KDR	ENST00000512566.1	2037	13	-298	2133	4	-2133	3prime_fragment	FALSE	canonical	1	67139	junction_10	31722.439253783745	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1497	299	1795	45.0	3	True	AATAAA	-10
PB.4855.2	chr17	-	3632	1	novel_in_catalog	SDF2	novel	1568	3	NA	NA	2	2205	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-9	True	NA	NA
PB.5692.6	chr19	+	2315	11	full-splice_match	PPAN	ENST00000393793.5	1575	11	-25	-715	-25	335	multi-exon	FALSE	canonical	1	445032	junction_1	111896.29220917019	NA	1	1	TRUE	NA	NA	NA	C	coding	420	1263	249	1511	15.0	-5299	False	NA	NA
PB.5692.5	chr19	+	1599	12	full-splice_match	PPAN	ENST00000253107.11	1657	12	63	-5	63	3	multi-exon	FALSE	canonical	1	294051	junction_1	139163.2098498108	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	44	1465	15.0	-10	True	AGTAAA	-19
PB.5692.4	chr19	+	1685	11	novel_in_catalog	PPAN-P2RY11	novel	2661	13	NA	NA	-47	-3439	intron_retention	FALSE	canonical	1	294051	junction_1	142426.44727311007	NA	0	NA	TRUE	NA	NA	NA	B	coding	385	1158	48	1205	15.0	-14	True	AGTAAA	-19
PB.5692.3	chr19	+	1707	11	novel_in_catalog	PPAN-P2RY11	novel	2661	13	NA	NA	-48	-3438	intron_retention	FALSE	canonical	1	294051	junction_1	144648.29219804154	NA	0	NA	TRUE	NA	NA	NA	B	coding	233	702	49	750	15.0	-15	True	AGTAAA	-20
PB.5692.2	chr19	+	2322	12	full-splice_match	PPAN	ENST00000253107.11	1657	12	51	-716	51	376	multi-exon	FALSE	canonical	1	294051	junction_1	139163.2098498108	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	56	1477	50.0	-22	True	NA	NA
PB.5692.1	chr19	+	3135	12	full-splice_match	PPAN	ENST00000253107.11	1657	12	40	-1518	40	1178	multi-exon	FALSE	canonical	1	294051	junction_1	139163.2098498108	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	67	1488	25.0	-33	True	NA	NA
PB.1011.31	chr1	-	3044	1	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	13	-4561	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	147	444	137	580	70.0	-58	True	NA	NA
PB.318.15	chr1	+	2987	11	incomplete-splice_match	CAP1	ENST00000372792.6	1496	13	13	-711	1	-25	intron_retention	FALSE	canonical	1	304468	junction_1	606794.9706441294	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	54	1298	90.0	20	True	NA	NA
PB.1746.15	chr11	-	1994	10	novel_in_catalog	IRF7	novel	1554	9	NA	NA	1	2	intron_retention	FALSE	canonical	1	176052	junction_9	97683.05943859433	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	1276	1908	25.0	0	True	AATAAA	-12
PB.1746.14	chr11	-	2007	10	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	2	intron_retention	FALSE	canonical	1	176052	junction_9	91410.52707550823	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	322	1566	25.0	-1	True	AATAAA	-12
PB.1746.17	chr11	-	1843	10	full-splice_match	IRF7	ENST00000348655.11	1807	10	-40	4	9	2	multi-exon	FALSE	canonical	1	33850	junction_4	131937.19156992098	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	333	1757	25.0	9207	False	AATAAA	-12
PB.1746.16	chr11	-	1917	9	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	2	intron_retention	FALSE	canonical	1	33850	junction_4	139834.47383016598	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	368	1831	25.0	-1	True	AATAAA	-12
PB.1746.11	chr11	-	2140	9	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	2	intron_retention	FALSE	canonical	1	176052	junction_8	95804.31261430771	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	1422	2054	25.0	-1	True	AATAAA	-12
PB.1746.10	chr11	-	2136	9	novel_in_catalog	IRF7	novel	1554	9	NA	NA	1	2	intron_retention	FALSE	canonical	1	45346	junction_6	137085.57473202414	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	1418	2050	25.0	0	True	AATAAA	-12
PB.1746.13	chr11	-	1919	11	full-splice_match	IRF7	ENST00000525445.6	1923	11	0	4	0	2	multi-exon	FALSE	canonical	1	176052	junction_10	92912.49627708859	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	322	1833	25.0	-1	True	AATAAA	-12
PB.1746.12	chr11	-	2079	9	novel_in_catalog	IRF7	novel	1554	9	NA	NA	1	2	intron_retention	FALSE	canonical	1	176052	junction_8	103592.15386764337	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	1361	1993	25.0	0	True	AATAAA	-12
PB.578.2	chr1	+	3655	16	novel_in_catalog	RNPC3	novel	2013	15	NA	NA	0	-6	intron_retention	FALSE	canonical	1	19556	junction_13	67664.58926643652	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	130	1683	35.0	-2	True	AATAAA	-15
PB.578.3	chr1	+	5297	27	novel_in_catalog	RNPC3	novel	2013	15	NA	NA	1	24286	intron_retention	FALSE	canonical	1	10436	junction_26	86635.5406184095	NA	2	NA	TRUE	NA	NA	NA	C	coding	517	1554	129	1682	45.0	-1	True	ATTAAA	-12
PB.318.17	chr1	+	2866	13	novel_in_catalog	CAP1	novel	3105	13	NA	NA	2	-25	intron_retention	FALSE	canonical	1	58934	junction_1	594275.1012782062	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	726	2153	90.0	-643	False	NA	NA
PB.578.6	chr1	+	3648	15	incomplete-splice_match	RNPC3	ENST00000533099.5	3641	16	254	-125	-18	-2	5prime_fragment	FALSE	canonical	1	19556	junction_12	68033.11792871205	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	119	1672	20.0	-13	True	AATAAA	-19
PB.1746.18	chr11	-	1778	9	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	2	intron_retention	FALSE	canonical	1	66743	junction_5	132335.46260734496	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	1060	1692	25.0	-1	True	AATAAA	-12
PB.578.4	chr1	+	4050	16	novel_not_in_catalog	RNPC3	novel	2013	15	NA	NA	2	-7	intron_retention	FALSE	canonical	1	4663	junction_8	72543.05567561623	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1294	2079	40.0	0	True	AATAAA	-14
PB.578.5	chr1	+	3756	16	novel_in_catalog	RNPC3	novel	2013	15	NA	NA	2	-7	intron_retention	FALSE	canonical	1	11202	junction_1	75258.97022846439	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	235	1785	40.0	0	True	AATAAA	-14
PB.1240.46	chr1	-	2076	10	incomplete-splice_match	HNRNPU	ENST00000640218.1	6858	14	-3	6226	-2	-243	3prime_fragment	FALSE	canonical	1	663885	junction_9	1478378.8695755585	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1842	234	2075	65.0	1	True	NA	NA
PB.1240.45	chr1	-	2082	10	incomplete-splice_match	HNRNPU	ENST00000444376.7	6827	14	16	6170	-6	-184	3prime_fragment	FALSE	canonical	1	1520437	junction_9	1288169.8866607447	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1845	238	2082	50.0	-3	True	AAGAAA	-43
PB.1240.44	chr1	-	2238	11	incomplete-splice_match	HNRNPU	ENST00000444376.7	6827	14	15	5717	-7	269	3prime_fragment	FALSE	canonical	1	1520437	junction_10	1321991.5413533666	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	1998	239	2236	65.0	-4	True	AAAAAG	-33
PB.1240.43	chr1	-	2246	11	incomplete-splice_match	HNRNPU	ENST00000640218.1	6858	14	44	5711	-1	272	3prime_fragment	FALSE	canonical	1	663885	junction_10	1500289.5107039874	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2058	187	2244	75.0	-11	True	AAAAAG	-36
PB.8581.1	chr3	+	2533	4	full-splice_match	NMRAL2P	ENST00000423298.5	1792	4	28	-769	0	769	multi-exon	FALSE	canonical	1	4450	junction_1	3901.814649051843	NA	1	NA	TRUE	NA	NA	NA	A	coding	153	462	268	729	70.0	0	True	GATAAA	-4
PB.1240.41	chr1	-	2649	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	-1	-200	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	1827858.14937794	NA	1	1	TRUE	NA	NA	NA	C	coding	790	2373	233	2605	30.0	2	True	AATAAA	-32
PB.8559.1	chr3	+	1888	11	novel_in_catalog	AP2M1	novel	2091	11	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	1595346.721242865	NA	1	1	TRUE	NA	NA	NA	C	coding	251	756	659	1414	15.0	43	True	AATAAA	-14
PB.386.2	chr1	+	3268	17	novel_in_catalog	RAD54L	novel	718	7	NA	NA	7	8	intron_retention	FALSE	canonical	1	93317	junction_5	47333.85610727669	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	668	2284	25.0	-24	True	AATAAA	-23
PB.8559.2	chr3	+	2927	10	novel_in_catalog	AP2M1	novel	2091	11	NA	NA	9	-1	intron_retention	FALSE	canonical	1	28087	junction_4	1648216.523391538	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	923	1831	15.0	9	True	AATAAA	-14
PB.2985.1	chr12	+	4622	42	novel_in_catalog	KNTC1	novel	331	2	NA	NA	-7	-9932	combination_of_known_junctions	FALSE	canonical	1	80012	junction_7	33734.07734333088	NA	0	NA	TRUE	NA	NA	NA	B	coding	1489	4467	156	4622	20.0	-10	True	ATTAAA	-16
PB.2985.3	chr12	+	6949	64	novel_in_catalog	KNTC1	novel	331	2	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	80012	junction_7	67500.30447714239	NA	0	NA	TRUE	NA	NA	NA	B	coding	2209	6630	149	6778	35.0	-3	True	AATAAA	-38
PB.2985.2	chr12	+	6864	64	novel_in_catalog	KNTC1	novel	331	2	NA	NA	-2	-6	combination_of_known_junctions	TRUE	canonical	1	11437	junction_54	69672.77800517883	NA	0	NA	TRUE	NA	NA	NA	B	coding	2183	6552	151	6702	40.0	-5	True	AATAAA	-29
PB.2985.5	chr12	+	6847	63	novel_in_catalog	KNTC1	novel	331	2	NA	NA	1	-6	no_combination_of_known_junctions	FALSE	canonical	1	4223	junction_44	72013.049431788	NA	1	NA	TRUE	NA	NA	NA	B	coding	2179	6540	146	6685	40.0	0	True	AATAAA	-29
PB.2985.4	chr12	+	4754	42	novel_in_catalog	KNTC1	novel	331	2	NA	NA	1	-9790	combination_of_known_junctions	FALSE	canonical	1	80012	junction_7	33734.07734333088	NA	0	NA	TRUE	NA	NA	NA	B	coding	1492	4479	146	4624	35.0	0	True	ATTAAA	-17
PB.2985.7	chr12	+	6782	63	novel_in_catalog	KNTC1	novel	331	2	NA	NA	1	10	no_combination_of_known_junctions	FALSE	canonical	1	8806	junction_1	71886.42250463093	NA	2	1	TRUE	NA	NA	NA	B	coding	2057	6174	431	6604	35.0	0	True	AATAAA	-45
PB.2985.6	chr12	+	6863	63	novel_in_catalog	KNTC1	novel	331	2	NA	NA	1	11	no_combination_of_known_junctions	FALSE	canonical	1	4458	junction_62	68381.14244711424	NA	0	NA	TRUE	NA	NA	NA	B	coding	2196	6591	146	6736	35.0	0	True	AATAAA	-42
PB.2985.8	chr12	+	4461	42	novel_in_catalog	KNTC1	novel	331	2	NA	NA	12	-10072	combination_of_known_junctions	FALSE	canonical	1	80012	junction_7	33734.07734333088	NA	0	NA	TRUE	NA	NA	NA	B	coding	1442	4326	135	4460	20.0	11	True	TTTAAA	-23
PB.5168.1	chr17	+	5708	30	full-splice_match	MRC2	ENST00000303375.9	5988	30	272	8	-12	-6	multi-exon	FALSE	canonical	1	251381	junction_1	110565.50639056963	NA	0	NA	TRUE	NA	NA	NA	A	coding	1479	4440	131	4570	30.0	0	True	NA	NA
PB.1902.3	chr11	-	2145	4	novel_not_in_catalog	LRRC4C	novel	4054	2	NA	NA	321	-60	any annotated donor/acceptor	FALSE	canonical	1	2996	junction_2	417.97208838230654	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	218	2128	80.0	-1	True	AAAACA	-14
PB.1902.2	chr11	-	2242	4	novel_not_in_catalog	LRRC4C	novel	4054	2	NA	NA	321	-23	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	1834.7063949186954	NA	15	3	TRUE	NA	NA	NA	C	coding	636	1911	226	2136	85.0	-1	True	NA	NA
PB.1902.1	chr11	-	2175	3	full-splice_match	LRRC4C	ENST00000533474.1	583	3	314	-1906	314	-23	multi-exon	FALSE	canonical	1	3873	junction_2	3425.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	159	2069	85.0	-8	False	NA	NA
PB.7306.10	chr20	-	3897	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	41	507	-14	-507	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	118	1539	30.0	-20	True	AATAAA	-18
PB.7306.17	chr20	-	3634	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-6	-2043	any annotated donor/acceptor	FALSE	canonical	1	16545	junction_2	450054.38779132266	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	110	1210	25.0	-12	True	AATACA	-18
PB.8200.4	chr3	+	2846	17	novel_in_catalog	PXK	novel	2037	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	7014	junction_1	116921.5016891508	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	105	1790	35.0	-52	True	ATTAAA	-9
PB.7306.15	chr20	-	2461	9	novel_in_catalog	SERINC3	novel	812	5	NA	NA	10	-1780	no_combination_of_known_junctions	FALSE	canonical	1	1526	junction_4	468655.22941310494	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	852	1376	40.0	-27	True	AATAAA	-12
PB.1902.4	chr11	-	2081	3	full-splice_match	LRRC4C	ENST00000533474.1	583	3	319	-1817	319	-60	multi-exon	FALSE	canonical	1	3873	junction_2	3425.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	154	2064	80.0	-3	True	AAAACA	-14
PB.10840.11	chr7	-	3371	15	full-splice_match	TMEM209	ENST00000397622.6	3545	15	61	113	-34	-113	multi-exon	FALSE	canonical	1	121259	junction_14	51760.57419622051	NA	1	NA	TRUE	NA	NA	NA	C	coding	561	1686	63	1748	40.0	-32	True	AATATA	-17
PB.7306.19	chr20	-	3518	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-6	-2159	any annotated donor/acceptor	FALSE	canonical	1	16545	junction_2	450054.38779132266	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	110	1210	15.0	-12	True	AATGAA	-22
PB.7306.18	chr20	-	2304	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	48	2093	-7	-2093	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	111	1532	30.0	-13	True	AGTAAA	-20
PB.12185.2	chrX	+	2101	1	novel_in_catalog	RPL36A	novel	910	5	NA	NA	1	-740	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	1	True	NA	NA
PB.10892.4	chr7	+	1867	5	novel_in_catalog	GSTK1	novel	556	5	NA	NA	7	-6	intron_retention	FALSE	canonical	1	1458219	junction_1	245358.17446388453	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	1044	1595	30.0	-5342	False	AATAAA	-17
PB.984.3	chr1	-	1598	4	novel_not_in_catalog	ARPC5	novel	7209	4	NA	NA	-26	-56	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	954322.9521680104	NA	0	NA	TRUE	NA	NA	NA	B	coding	101	306	275	580	60.0	-1	True	AATACA	-28
PB.984.2	chr1	-	4324	3	novel_not_in_catalog	ARPC5	novel	7209	4	NA	NA	3	-9	intron_retention	FALSE	non_canonical	0	0	junction_2	993320.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-10	True	AATAAA	-12
PB.984.1	chr1	-	1816	4	novel_not_in_catalog	ARPC5	novel	7209	4	NA	NA	3	-73	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	954322.9521680104	NA	0	NA	TRUE	NA	NA	NA	B	coding	101	306	246	551	5.0	-10	True	TATAAA	-26
PB.10840.12	chr7	-	3246	15	full-splice_match	TMEM209	ENST00000397622.6	3545	15	11	288	11	-288	multi-exon	FALSE	canonical	1	121259	junction_14	51760.57419622051	NA	3	NA	TRUE	NA	NA	NA	C	coding	561	1686	113	1798	30.0	159	False	AGTAAA	-18
PB.6597.1	chr2	-	1551	8	full-splice_match	TMEM150A	ENST00000334462.9	1518	8	-20	-13	0	0	multi-exon	FALSE	canonical	1	67413	junction_7	41500.30423247226	NA	0	NA	TRUE	NA	NA	NA	A	coding	271	816	209	1024	10.0	-1	True	ATTAAA	-15
PB.4193.1	chr16	-	2934	2	full-splice_match	PKMYT1	ENST00000571102.1	846	2	35	-2123	35	2123	multi-exon	FALSE	canonical	1	8994	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	668	1159	10.0	-20	False	ATTAAA	-19
PB.11098.6	chr8	+	4785	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-2	-272	combination_of_known_junctions	FALSE	canonical	1	21990	junction_1	171463.2157189626	NA	2	NA	TRUE	NA	NA	NA	C	coding	748	2247	59	2305	35.0	-2	True	AATAAA	-17
PB.6788.8	chr2	+	5843	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	-38	-3348	-38	3	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	172	2355	15.0	-32	True	NA	NA
PB.6788.9	chr2	+	5477	16	novel_in_catalog	GPD2	novel	456	4	NA	NA	-34	-249	no_combination_of_known_junctions	FALSE	canonical	1	1763	junction_1	77285.00266140471	NA	3	NA	TRUE	NA	NA	NA	C	coding	693	2082	160	2241	20.0	-28	True	AATAAA	-17
PB.4763.1	chr17	-	1242	9	full-splice_match	AURKB	ENST00000585124.5	1227	9	19	-34	2	4	multi-exon	TRUE	canonical	1	426448	junction_7	145665.12480407758	NA	0	NA	TRUE	NA	NA	NA	A	coding	344	1035	76	1110	25.0	-5	True	AATAAA	-17
PB.6788.2	chr2	+	5575	17	full-splice_match	GPD2	ENST00000310454.10	6041	17	217	249	217	-249	multi-exon	FALSE	canonical	1	48319	junction_5	71078.73128437292	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	156	2339	20.0	-769	False	AATAAA	-17
PB.6788.3	chr2	+	5501	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	-199	-2845	-199	-500	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	333	2516	15.0	0	True	TTTAAA	-44
PB.6788.1	chr2	+	3553	17	full-splice_match	GPD2	ENST00000310454.10	6041	17	165	2323	165	676	multi-exon	TRUE	canonical	1	48319	junction_5	71078.73128437292	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	208	2391	75.0	-2	True	AGTAAA	-3
PB.6788.6	chr2	+	2867	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	-64	-346	-64	0	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	198	2381	30.0	-102	False	ATTAAA	-16
PB.6788.7	chr2	+	5239	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	-42	-2740	-42	-605	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	176	2359	15.0	-80	False	ATTAAA	-19
PB.6788.4	chr2	+	5516	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	37	-3096	-1	-249	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	97	2280	20.0	-1	True	AATAAA	-17
PB.6788.5	chr2	+	3488	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	-9	-1022	-9	676	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	143	2326	75.0	-3	True	AGTAAA	-3
PB.11820.1	chr9	+	2815	13	full-splice_match	SLC27A4	ENST00000300456.4	3028	13	-36	249	-36	4	multi-exon	FALSE	canonical	1	123398	junction_1	90617.21507620209	NA	0	NA	TRUE	NA	NA	NA	A	coding	643	1932	154	2085	25.0	-17	True	AATAAA	-19
PB.12185.1	chrX	+	405	5	full-splice_match	RPL36A	ENST00000553110.7	429	5	28	-4	0	4	multi-exon	FALSE	canonical	1	9501	junction_3	256532.9739881162	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	34	354	10.0	0	True	AATAAA	-23
PB.966.2	chr1	+	3544	5	incomplete-splice_match	CEP350	ENST00000417046.1	2724	6	421	0	421	0	intron_retention	FALSE	canonical	1	191518	junction_2	18888.665821068465	NA	5	NA	TRUE	NA	NA	NA	B	coding	285	858	468	1325	85.0	-9089	False	AAGAAA	-36
PB.966.1	chr1	+	6253	5	incomplete-splice_match	CEP350	ENST00000417046.1	2724	6	-794	-1494	-794	-6	intron_retention	FALSE	canonical	1	191518	junction_2	18888.665821068465	NA	3	NA	TRUE	NA	NA	NA	B	coding	790	2373	168	2540	20.0	-2227	False	AATAAA	-16
PB.2991.2	chr12	+	1772	7	full-splice_match	OGFOD2	ENST00000228922.11	1780	7	11	-3	-8	1	multi-exon	FALSE	canonical	1	92972	junction_4	67525.03297152513	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	22	1074	0.0	-13	True	NA	NA
PB.2991.1	chr12	+	3260	6	novel_in_catalog	OGFOD2	novel	2308	8	NA	NA	-6	1	intron_retention	FALSE	canonical	1	95814	junction_1	66024.56563249772	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	2002	2562	0.0	-30	True	NA	NA
PB.2101.1	chr11	+	2850	14	full-splice_match	SSH3	ENST00000308127.8	2871	14	27	-6	-3	1	multi-exon	TRUE	canonical	1	95247	junction_1	58404.216282710564	NA	0	NA	TRUE	NA	NA	NA	A	coding	659	1980	152	2131	30.0	-699	False	AATAAA	-28
PB.11589.1	chr9	+	2666	2	incomplete-splice_match	BX649567.1	ENST00000642071.1	1134	5	109	15143	109	-15143	3prime_fragment	FALSE	canonical	1	59	junction_1	0.0	NA	53	1	TRUE	NA	NA	NA	A	coding	84	255	144	398	75.0	NA	False	NA	NA
PB.8018.2	chr3	+	3713	3	novel_in_catalog	MYD88	novel	2712	4	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	351378	junction_1	151908.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	759	1586	20.0	-27	True	AATAAA	-16
PB.10733.1	chr7	-	2707	17	incomplete-splice_match	GIGYF1	ENST00000275732.5	6530	24	3083	1851	394	-1851	5prime_fragment	FALSE	canonical	1	141862	junction_5	75809.7939842445	NA	1	NA	TRUE	NA	NA	NA	A	coding	733	2202	145	2346	75.0	8082	False	NA	NA
PB.1441.1	chr10	+	2195	7	full-splice_match	KIF1BP	ENST00000361983.6	2544	7	52	297	23	-217	multi-exon	FALSE	canonical	1	267683	junction_2	52599.34453568156	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	61	1926	30.0	-30	True	ATTAAA	-22
PB.1441.2	chr10	+	2468	7	full-splice_match	KIF1BP	ENST00000361983.6	2544	7	72	4	-3	2	multi-exon	FALSE	canonical	1	267683	junction_2	52599.34453568156	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	41	1906	20.0	-10	True	AATAAA	-25
PB.7982.10	chr3	-	2027	11	full-splice_match	NGLY1	ENST00000396649.7	2024	11	-3	0	-3	0	multi-exon	FALSE	canonical	1	66949	junction_1	90901.59589825693	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	52	1728	30.0	1	True	AATAAA	-19
PB.8609.23	chr3	-	1841	2	full-splice_match	ACAP2	ENST00000490224.1	578	2	-46	-1217	-12	1217	multi-exon	FALSE	canonical	1	1548	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-28
PB.8609.22	chr3	-	3368	1	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	29	2146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.6825.2	chr2	+	1646	12	full-splice_match	SSB	ENST00000260956.8	1709	12	59	4	-8	-4	multi-exon	FALSE	canonical	1	459433	junction_9	532767.9829559878	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	116	1342	30.0	-8	True	AATAAA	-24
PB.8609.21	chr3	-	3802	1	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	33	2584	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	3	True	NA	NA
PB.6825.3	chr2	+	2016	12	full-splice_match	SSB	ENST00000409333.1	1782	12	-240	6	159	-6	multi-exon	FALSE	canonical	1	57007	junction_1	581114.9713766482	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	488	1714	35.0	-9617	False	AATAAA	-22
PB.2784.2	chr12	+	2599	6	full-splice_match	TMTC2	ENST00000548305.5	2682	6	80	3	80	-3	multi-exon	FALSE	canonical	1	61286	junction_2	19714.110432885376	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	507	2420	15.0	-384	False	NA	NA
PB.2784.3	chr12	+	1349	2	incomplete-splice_match	TMTC2	ENST00000548305.5	2682	6	-107	108389	14	-108389	3prime_fragment	FALSE	canonical	1	118047	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	654	694	1347	20.0	-12	True	AATAAA	-28
PB.2784.1	chr12	+	5726	12	full-splice_match	TMTC2	ENST00000321196.7	5681	12	-36	-9	-36	9	multi-exon	FALSE	canonical	1	54054	junction_8	17260.554130039774	NA	2	NA	TRUE	NA	NA	NA	C	coding	836	2511	744	3254	40.0	-9	True	AATAAA	-10
PB.2784.4	chr12	+	5104	12	full-splice_match	TMTC2	ENST00000321196.7	5681	12	15	562	15	-12	multi-exon	FALSE	canonical	1	54054	junction_8	17260.554130039774	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2511	693	3203	75.0	-11	True	NA	NA
PB.8099.10	chr3	+	2251	17	novel_in_catalog	ARIH2	novel	598	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	87343	junction_3	186700.75385288184	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	787	1842	15.0	-19	True	AATAAA	-19
PB.8018.8	chr3	+	2646	5	novel_not_in_catalog	MYD88	novel	2712	4	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	48859	junction_3	215648.89266510852	NA	1	1	TRUE	NA	NA	NA	C	coding	245	738	41	778	15.0	0	True	AATAAA	-18
PB.7982.13	chr3	-	2478	1	novel_in_catalog	NGLY1	novel	2534	12	NA	NA	12	-2352	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	91	276	81	356	80.0	-28	False	NA	NA
PB.8576.10	chr3	+	3062	16	novel_in_catalog	SENP2	novel	878	7	NA	NA	18	689	no_combination_of_known_junctions	FALSE	canonical	1	826	junction_1	104432.41982671003	NA	6	NA	TRUE	NA	NA	NA	C	coding	509	1530	283	1812	55.0	7	True	AATAAA	-19
PB.7741.12	chr22	+	2097	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	-1	2	any annotated donor/acceptor	FALSE	canonical	1	539	junction_6	131301.7438861935	NA	1	NA	TRUE	NA	NA	NA	B	coding	398	1197	110	1306	20.0	-3	True	NA	NA
PB.7741.13	chr22	+	2379	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131496.13702743853	NA	0	NA	TRUE	NA	NA	NA	B	coding	398	1197	107	1303	15.0	0	True	NA	NA
PB.7741.10	chr22	+	2217	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131496.13702743853	NA	3	1	TRUE	NA	NA	NA	B	coding	398	1197	127	1323	25.0	-20	False	NA	NA
PB.7741.11	chr22	+	1967	6	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	-8	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	165689.31475336602	NA	1	NA	TRUE	NA	NA	NA	B	coding	380	1143	117	1259	20.0	-10	False	NA	NA
PB.8054.1	chr3	-	8650	7	novel_in_catalog	ZNF445	novel	18299	8	NA	NA	0	-1872	intron_retention	FALSE	canonical	1	32	junction_5	35393.13650350242	NA	8	NA	TRUE	NA	NA	NA	C	coding	798	2397	1321	3717	25.0	4	True	AGTAAA	-17
PB.7741.14	chr22	+	2217	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131496.13702743853	NA	2	1	TRUE	NA	NA	NA	B	coding	398	1197	107	1303	20.0	0	True	NA	NA
PB.7741.15	chr22	+	1765	4	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	4223	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	171994.52216923138	NA	5	1	TRUE	NA	NA	NA	B	coding	339	1020	12	1031	20.0	-9041	False	NA	NA
PB.8099.14	chr3	+	1941	17	novel_in_catalog	ARIH2	novel	598	3	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	1	887	junction_3	192229.0071386921	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	340	1605	85.0	-12	True	NA	NA
PB.4413.19	chr16	+	3778	12	incomplete-splice_match	LONP2	ENST00000285737.8	8199	15	4	21240	4	-11507	3prime_fragment	FALSE	canonical	1	260164	junction_1	70735.61294305544	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	90	2084	70.0	0	True	TTTAAA	-11
PB.4413.18	chr16	+	3849	14	full-splice_match	LONP2	ENST00000535754.5	2580	14	-33	-1236	4	1236	multi-exon	FALSE	canonical	1	32780	junction_2	135234.4715791864	NA	7	NA	TRUE	NA	NA	NA	C	coding	808	2427	90	2516	35.0	0	True	NA	NA
PB.4413.13	chr16	+	4550	16	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	-3	-1846	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	133906.2863010297	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	97	2655	20.0	-7	True	NA	NA
PB.4413.12	chr16	+	3951	13	novel_in_catalog	LONP2	novel	8199	15	NA	NA	-4	1597	no_combination_of_known_junctions	FALSE	canonical	1	5392	junction_12	132967.04996497775	NA	5	1	TRUE	NA	NA	NA	C	coding	719	2160	98	2257	100.0	-8	True	NA	NA
PB.4413.11	chr16	+	6181	16	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	-14	-837	any annotated donor/acceptor	FALSE	canonical	1	61	junction_15	133893.71676194848	NA	4	NA	TRUE	NA	NA	NA	C	coding	852	2559	108	2666	100.0	-18	True	NA	NA
PB.4413.10	chr16	+	4229	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	-14	3984	-14	1466	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	108	2666	15.0	-18	True	NA	NA
PB.4413.17	chr16	+	3904	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	7	4288	7	1162	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	87	2645	30.0	3	True	NA	NA
PB.4413.16	chr16	+	3165	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	-3	5037	-3	413	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	1	1	TRUE	NA	NA	NA	C	coding	852	2559	97	2655	55.0	-7	True	NA	NA
PB.4413.15	chr16	+	4283	16	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	-3	-1846	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	133906.2863010297	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	97	2655	20.0	-7	True	NA	NA
PB.4413.14	chr16	+	4254	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	92	3853	0	1597	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	2	2560	100.0	88	True	NA	NA
PB.1932.14	chr11	-	3775	16	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	18601	junction_15	240967.14484368105	NA	2	1	TRUE	NA	NA	NA	C	coding	514	1545	332	1876	85.0	0	True	AATAAA	-4
PB.5670.9	chr19	+	2639	13	novel_not_in_catalog	MAP2K7	novel	3430	11	NA	NA	1	-716	intron_retention	TRUE	non_canonical	0	0	junction_12	141271.85661508178	NA	3	NA	TRUE	NA	NA	NA	C	coding	435	1308	60	1367	80.0	9	True	NA	NA
PB.7427.3	chr20	-	1819	13	novel_not_in_catalog	UCKL1	novel	1837	15	NA	NA	2	2	intron_retention	FALSE	canonical	1	21543	junction_6	210558.02213358093	NA	3	1	TRUE	NA	NA	NA	B	coding	189	570	605	1174	40.0	2	True	AATAAA	-12
PB.9298.5	chr5	-	5213	16	novel_in_catalog	COL4A3BP	novel	1870	13	NA	NA	0	13	no_combination_of_known_junctions	FALSE	canonical	1	1097	junction_8	80690.16019207188	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	411	2120	25.0	4	True	ATTAAA	-41
PB.7427.2	chr20	-	1823	14	novel_not_in_catalog	UCKL1	novel	1837	15	NA	NA	-3	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	177593.01267173348	NA	3	1	TRUE	NA	NA	NA	B	coding	400	1203	47	1249	40.0	-3	True	AATAAA	-12
PB.402.34	chr1	+	2794	21	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	-2	-67	combination_of_known_junctions	FALSE	canonical	1	6669	junction_4	289123.329181666	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	510	2186	40.0	2	True	ATTAAA	-17
PB.9033.24	chr4	+	3903	26	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	6571	-13537	any annotated donor/acceptor	FALSE	canonical	1	2429	junction_1	83942.60047841263	NA	4	1	TRUE	NA	NA	NA	C	coding	1052	3156	747	3902	60.0	0	True	AAAAAG	-8
PB.2314.9	chr11	-	4463	26	novel_in_catalog	HYOU1	novel	4529	26	NA	NA	0	2	intron_retention	FALSE	canonical	1	205778	junction_25	314830.97175281594	NA	1	NA	TRUE	NA	NA	NA	C	coding	999	3000	58	3057	5.0	-1	True	AATAAA	-17
PB.2314.8	chr11	-	4548	26	full-splice_match	HYOU1	ENST00000617285.4	4529	26	-17	-2	3	2	multi-exon	FALSE	canonical	1	379443	junction_25	293258.6509412713	NA	0	NA	TRUE	NA	NA	NA	C	coding	999	3000	143	3142	5.0	69	False	AATAAA	-17
PB.7430.3	chr20	+	3026	21	novel_not_in_catalog	PRPF6	novel	3044	21	NA	NA	-11	-2	any annotated donor/acceptor	TRUE	canonical	1	276	junction_15	291493.8672496344	NA	22	2	TRUE	NA	NA	NA	C	coding	932	2799	123	2921	20.0	-8	True	ATTAAA	-22
PB.402.35	chr1	+	2644	19	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	0	-67	combination_of_known_junctions	FALSE	canonical	1	4920	junction_10	283057.6327701995	NA	1	1	TRUE	NA	NA	NA	C	coding	307	924	1113	2036	40.0	0	True	ATTAAA	-17
PB.4565.1	chr16	+	2528	5	full-splice_match	WWOX	ENST00000562214.5	654	5	13	-1887	-6	1887	multi-exon	FALSE	canonical	1	14661	junction_4	72342.38254474344	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	111	527	30.0	13	True	ACTAAA	-16
PB.2314.7	chr11	-	4683	25	novel_in_catalog	HYOU1	novel	4529	26	NA	NA	1	2	intron_retention	FALSE	canonical	1	379443	junction_24	297305.36243941914	NA	5	1	TRUE	NA	NA	NA	C	coding	961	2886	392	3277	5.0	22	True	AATAAA	-17
PB.4565.2	chr16	+	1792	5	full-splice_match	WWOX	ENST00000562214.5	654	5	18	-1156	-1	1156	multi-exon	FALSE	canonical	1	14661	junction_4	72342.38254474344	NA	2	NA	TRUE	NA	NA	NA	C	coding	138	417	106	522	20.0	18	True	TATAAA	-17
PB.8890.4	chr4	+	2803	11	full-splice_match	METAP1	ENST00000296411.10	2791	11	91	-103	-10	103	multi-exon	FALSE	canonical	1	359066	junction_2	99967.64172651069	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	44	1204	30.0	-10	True	AATAAA	-20
PB.2201.2	chr11	-	3607	9	full-splice_match	CCDC90B	ENST00000529689.5	4014	9	411	-4	2	4	multi-exon	FALSE	canonical	1	152876	junction_2	74434.55866061141	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	25	789	35.0	386	False	AATAAA	-18
PB.2201.3	chr11	-	2661	9	full-splice_match	CCDC90B	ENST00000525503.5	1919	9	364	-1106	1	967	multi-exon	FALSE	canonical	1	152832	junction_8	88104.03776280276	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	639	1100	25.0	-10	True	ATTAAA	-18
PB.3251.8	chr13	-	4152	4	novel_not_in_catalog	LIG4	novel	3982	3	NA	NA	35	-1953	any annotated donor/acceptor	FALSE	canonical	1	3285	junction_3	31368.28192440397	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1869	2283	4151	60.0	-7	True	NA	NA
PB.2201.1	chr11	-	3918	9	full-splice_match	CCDC90B	ENST00000525503.5	1919	9	364	-2363	1	4	multi-exon	FALSE	canonical	1	152832	junction_8	88104.03776280276	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	639	1100	35.0	-10	True	AATAAA	-18
PB.2201.6	chr11	-	2074	9	full-splice_match	CCDC90B	ENST00000529689.5	4014	9	399	1541	-10	679	multi-exon	FALSE	canonical	1	152876	junction_2	74434.55866061141	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	37	801	30.0	0	True	TATAAA	-20
PB.2201.7	chr11	-	1232	9	full-splice_match	CCDC90B	ENST00000529689.5	4014	9	421	2361	2	-2	multi-exon	FALSE	canonical	1	152876	junction_2	74434.55866061141	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	15	779	25.0	-9	True	TATAAA	-20
PB.2201.4	chr11	-	2342	9	full-splice_match	CCDC90B	ENST00000529689.5	4014	9	419	1253	0	967	multi-exon	FALSE	canonical	1	152876	junction_2	74434.55866061141	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	17	781	25.0	-11	True	ATTAAA	-18
PB.2201.5	chr11	-	2216	9	full-splice_match	CCDC90B	ENST00000529689.5	4014	9	420	1378	1	842	multi-exon	FALSE	canonical	1	152876	junction_2	74434.55866061141	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	16	780	20.0	-10	True	AAGAAA	-13
PB.3251.2	chr13	-	4372	4	novel_not_in_catalog	LIG4	novel	3982	3	NA	NA	19	0	any annotated donor/acceptor	FALSE	canonical	1	1474	junction_3	32031.44216061601	NA	6	NA	TRUE	NA	NA	NA	C	coding	911	2736	550	3285	35.0	-23	True	AATAAA	-18
PB.3251.3	chr13	-	4086	3	novel_not_in_catalog	LIG4	novel	3982	3	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	7068	junction_2	35997.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	264	2999	35.0	-2	True	AATAAA	-18
PB.2201.8	chr11	-	1976	9	full-splice_match	CCDC90B	ENST00000529611.5	1986	9	11	-1	1	1	multi-exon	FALSE	canonical	1	64997	junction_8	106554.3142333993	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	1065	1526	20.0	-10	True	TATAAA	-17
PB.2201.9	chr11	-	1570	9	full-splice_match	CCDC90B	ENST00000525503.5	1919	9	343	6	-10	0	multi-exon	FALSE	canonical	1	152832	junction_8	88104.03776280276	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	660	1121	25.0	0	True	TATAAA	-16
PB.3251.7	chr13	-	4028	3	novel_not_in_catalog	LIG4	novel	3982	3	NA	NA	19	-1	any annotated donor/acceptor	FALSE	canonical	1	5192	junction_1	938.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	207	2942	35.0	31	True	AATAAA	-17
PB.3251.5	chr13	-	4041	2	full-splice_match	LIG4	ENST00000405925.2	4065	2	17	7	17	0	multi-exon	FALSE	canonical	1	10832	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	911	2736	219	2954	35.0	-25	True	AATAAA	-18
PB.1502.7	chr10	+	4749	8	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	18	-727	no_combination_of_known_junctions	FALSE	canonical	1	6566	junction_1	171181.69976790325	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	174	821	95.0	1	True	NA	NA
PB.1502.6	chr10	+	5480	8	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	17	3	no_combination_of_known_junctions	FALSE	canonical	1	6566	junction_1	171181.69976790325	NA	3	NA	TRUE	NA	NA	NA	C	coding	215	648	175	822	40.0	0	True	AATAAA	-28
PB.1502.5	chr10	+	2858	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	17	138	no_combination_of_known_junctions	FALSE	canonical	1	64054	junction_1	155678.77516155652	NA	2	1	TRUE	NA	NA	NA	C	coding	270	813	249	1061	35.0	0	True	NA	NA
PB.1502.4	chr10	+	5684	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-6	2	no_combination_of_known_junctions	FALSE	canonical	1	64054	junction_1	155678.77516155652	NA	13	NA	TRUE	NA	NA	NA	C	coding	270	813	215	1027	40.0	6	True	AATAAA	-27
PB.1502.3	chr10	+	2550	8	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-19	-1	no_combination_of_known_junctions	FALSE	canonical	1	3417	junction_3	217231.64386752626	NA	7	1	TRUE	NA	NA	NA	C	coding	204	615	285	899	15.0	-5072	False	AATATA	-10
PB.1502.2	chr10	+	2685	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-11	1	no_combination_of_known_junctions	FALSE	canonical	1	64054	junction_1	155678.77516155652	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	220	1032	10.0	1	True	AATATA	-12
PB.1502.1	chr10	+	2548	9	full-splice_match	TSPAN14	ENST00000429989.7	16183	9	145	13490	-11	-2	multi-exon	FALSE	canonical	1	135973	junction_1	120947.92493614503	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	79	891	5.0	1	True	AATATA	-16
PB.9013.3	chr4	-	4145	14	novel_not_in_catalog	ZNF827	novel	7463	15	NA	NA	16	-7	any annotated donor/acceptor	FALSE	canonical	1	4203	junction_1	34717.81390262807	NA	0	NA	TRUE	NA	NA	NA	C	coding	1077	3234	49	3282	90.0	-11	True	NA	NA
PB.7702.3	chr22	+	3314	1	novel_in_catalog	MTFP1	novel	1370	4	NA	NA	-35	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	104	315	2677	2991	10.0	4	True	AATAAA	-13
PB.7702.2	chr22	+	2547	2	full-splice_match	MTFP1	ENST00000614920.1	648	2	-38	-1861	-38	0	multi-exon	FALSE	canonical	1	415831	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	76	231	144	374	10.0	1	True	AATAAA	-13
PB.7702.1	chr22	+	1164	4	full-splice_match	MTFP1	ENST00000266263.9	1370	4	207	-1	-38	1	multi-exon	FALSE	canonical	1	373183	junction_2	48400.59441324616	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	144	644	10.0	1	True	AATAAA	-14
PB.2713.5	chr12	+	1702	7	novel_in_catalog	AC025165.3	novel	679	6	NA	NA	9734	9690	intron_retention	FALSE	canonical	1	3990	junction_3	237894.46790360403	NA	0	NA	TRUE	NA	NA	NA	A	coding	285	858	692	1549	25.0	0	True	AATAAA	-24
PB.9013.9	chr4	-	2681	7	incomplete-splice_match	ZNF827	ENST00000379448.8	4197	15	-368	85248	-204	3365	3prime_fragment	FALSE	canonical	1	48491	junction_5	31273.32046338469	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2247	433	2679	55.0	-17	True	AAAAAG	-23
PB.1502.9	chr10	+	2478	10	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	22	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	174702.66777359147	NA	9	1	TRUE	NA	NA	NA	C	coding	286	861	103	963	15.0	5	True	AATATA	-10
PB.1502.8	chr10	+	5450	9	full-splice_match	TSPAN14	ENST00000429989.7	16183	9	117	10616	18	-124	multi-exon	FALSE	canonical	1	135973	junction_1	120947.92493614503	NA	5	NA	TRUE	NA	NA	NA	C	coding	270	813	107	919	85.0	1	True	NA	NA
PB.1681.7	chr10	+	4875	21	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	-11	-2	no_combination_of_known_junctions	FALSE	canonical	1	2858	junction_3	79778.77277000129	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	400	3510	40.0	93	False	AATAAA	-21
PB.1681.6	chr10	+	2204	17	incomplete-splice_match	INPP5F	ENST00000649251.1	4421	19	13	6201	13	-1339	3prime_fragment	FALSE	canonical	1	56675	junction_1	40527.38999116639	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2007	197	2203	60.0	16	True	AGTAAA	-24
PB.1681.5	chr10	+	4890	19	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	347	junction_1	76912.15583514661	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	207	3524	40.0	6	True	AATAAA	-22
PB.1681.4	chr10	+	4854	19	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	1	-1	no_combination_of_known_junctions	TRUE	canonical	1	1826	junction_12	79020.91179695551	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	219	3488	40.0	-6	True	AATAAA	-22
PB.1681.3	chr10	+	4491	20	full-splice_match	INPP5F	ENST00000650623.1	4944	20	1	452	1	14	multi-exon	FALSE	canonical	1	56675	junction_1	70901.86298635804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	178	3576	70.0	1	True	NA	NA
PB.1681.2	chr10	+	5179	21	novel_not_in_catalog	INPP5F	novel	5007	21	NA	NA	-24	-1	any annotated donor/acceptor	FALSE	canonical	1	90	junction_2	80234.59883259528	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	703	3813	40.0	-124	False	AATAAA	-22
PB.12142.2	chrX	+	6911	6	full-splice_match	CHIC1	ENST00000373502.9	4158	6	-60	-2693	-52	2	multi-exon	FALSE	canonical	1	44567	junction_5	5877.728214199768	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	159	812	20.0	0	True	AATAAA	-20
PB.12142.3	chrX	+	4082	6	full-splice_match	CHIC1	ENST00000373502.9	4158	6	83	-7	9	7	multi-exon	FALSE	canonical	1	44567	junction_5	5877.728214199768	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	16	669	45.0	0	True	AATAAA	-24
PB.9995.5	chr6	+	1622	5	incomplete-splice_match	RPL7L1	ENST00000483998.6	1103	6	289	-119	-13	119	intron_retention	FALSE	canonical	1	6822	junction_1	90513.74550171924	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	313	666	60.0	-10	False	NA	NA
PB.54.1	chr1	-	1633	9	full-splice_match	ACOT7	ENST00000377855.6	1614	9	-18	-1	-18	1	multi-exon	FALSE	canonical	1	54531	junction_8	323557.9510898125	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	166	1308	5.0	8000	False	AATAAA	-18
PB.1681.9	chr10	+	3314	11	incomplete-splice_match	INPP5F	ENST00000649251.1	4421	19	26	21408	-2	15076	intron_retention	FALSE	canonical	1	56675	junction_1	18189.865333201345	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	184	1506	85.0	-5	True	NA	NA
PB.1681.8	chr10	+	3032	15	incomplete-splice_match	INPP5F	ENST00000649251.1	4421	19	25	15764	-3	-10902	3prime_fragment	FALSE	canonical	1	56675	junction_1	22087.643148075684	NA	1	NA	TRUE	NA	NA	NA	C	coding	629	1890	185	2074	80.0	-6	True	AATATA	-6
PB.10387.1	chr7	-	3856	16	novel_not_in_catalog	PMS2	novel	2855	15	NA	NA	-17	2311	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	61370.60873074522	NA	2	1	TRUE	NA	NA	NA	C	coding	862	2589	40	2628	30.0	25	False	NA	NA
PB.10518.2	chr7	-	2701	9	novel_in_catalog	POLM	novel	2444	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	10283	junction_4	47982.76740924808	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	194	817	20.0	-7	True	AAAACA	-7
PB.10387.3	chr7	-	3565	16	novel_not_in_catalog	PMS2	novel	2855	15	NA	NA	-6	2310	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	61370.60873074522	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	29	2617	30.0	1	True	NA	NA
PB.10387.2	chr7	-	3358	15	novel_not_in_catalog	PMS2	novel	2855	15	NA	NA	9	2311	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56672.9288243568	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	70	2544	30.0	-5	True	NA	NA
PB.10387.5	chr7	-	2962	15	novel_not_in_catalog	PMS2	novel	2855	15	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	143	junction_14	63363.23199697156	NA	5	1	TRUE	NA	NA	NA	C	coding	727	2184	622	2805	30.0	20	False	AATACA	-44
PB.10387.4	chr7	-	3205	15	full-splice_match	PMS2	ENST00000265849.11	2855	15	29	-379	1	379	multi-exon	FALSE	canonical	1	1894	junction_1	56404.55222872043	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	78	2666	85.0	-13	True	NA	NA
PB.10387.7	chr7	-	2693	15	novel_in_catalog	PMS2	novel	2855	15	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	1	1894	junction_1	66281.18431426855	NA	13	NA	TRUE	NA	NA	NA	C	coding	551	1656	910	2565	40.0	-1	True	AATACA	-15
PB.10387.6	chr7	-	2825	15	full-splice_match	PMS2	ENST00000265849.11	2855	15	5	25	5	10	multi-exon	FALSE	canonical	1	1894	junction_1	56404.55222872043	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	102	2690	35.0	-37	False	AATACA	-22
PB.10387.9	chr7	-	1804	11	incomplete-splice_match	PMS2	ENST00000406569.7	1719	12	-67	9354	11	-9354	3prime_fragment	FALSE	canonical	1	90167	junction_10	26443.498177245765	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1737	68	1804	55.0	-3	True	NA	NA
PB.3017.2	chr12	-	3249	10	full-splice_match	STX2	ENST00000261653.10	3331	10	78	4	6	-4	multi-exon	FALSE	canonical	1	70142	junction_1	68716.495283156	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	90	953	20.0	0	True	AATAAA	-14
PB.11759.19	chr9	-	2426	8	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	2600	-1573	any annotated donor/acceptor	FALSE	canonical	1	1949	junction_6	137551.00074517814	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	488	1372	30.0	-7	True	AAGAAA	-20
PB.3017.1	chr12	-	3431	11	full-splice_match	STX2	ENST00000392373.6	2151	11	-50	-1230	22	-4	multi-exon	FALSE	canonical	1	67158	junction_1	70598.09500517702	NA	2	1	TRUE	NA	NA	NA	C	coding	288	867	146	1012	20.0	5	True	AATAAA	-14
PB.8497.14	chr3	+	2282	7	incomplete-splice_match	SMC4	ENST00000462787.5	5033	22	-17	20392	0	15	3prime_fragment	FALSE	canonical	1	296672	junction_1	178575.10470169748	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1104	1177	2280	65.0	1	True	AATAAA	-6
PB.1469.9	chr10	-	1762	13	full-splice_match	ANXA7	ENST00000372921.9	2452	13	9	681	9	-133	multi-exon	FALSE	canonical	1	905852	junction_12	419787.4295436372	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	49	1449	35.0	-1	True	AATAAA	-18
PB.1469.8	chr10	-	2693	11	novel_in_catalog	ANXA7	novel	2452	13	NA	NA	9	-133	intron_retention	FALSE	canonical	1	905852	junction_10	386512.3173658118	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	49	1143	35.0	-1	True	AATAAA	-18
PB.8574.1	chr3	-	1395	5	full-splice_match	TMEM41A	ENST00000421852.5	2827	5	20	1412	-2	-16	multi-exon	FALSE	canonical	1	122068	junction_4	63670.14818971289	NA	0	NA	TRUE	NA	NA	NA	A	coding	264	795	77	871	90.0	-3	True	NA	NA
PB.1469.3	chr10	-	2257	14	novel_not_in_catalog	ANXA7	novel	2452	13	NA	NA	-9	9	any annotated donor/acceptor	FALSE	canonical	1	1273	junction_12	724286.1257235032	NA	16	NA	TRUE	NA	NA	NA	C	coding	291	876	723	1598	30.0	-28	True	NA	NA
PB.1469.2	chr10	-	2037	12	novel_in_catalog	ANXA7	novel	2452	13	NA	NA	-3	-19	combination_of_known_junctions	FALSE	canonical	1	71203	junction_11	590185.2522241856	NA	2	NA	TRUE	NA	NA	NA	C	coding	426	1281	126	1406	60.0	-13	True	NA	NA
PB.1469.1	chr10	-	2458	13	full-splice_match	ANXA7	ENST00000372921.9	2452	13	-1	-5	-1	5	multi-exon	FALSE	canonical	1	905852	junction_12	419787.4295436372	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	59	1459	5.0	-11	True	NA	NA
PB.1469.7	chr10	-	1875	13	full-splice_match	ANXA7	ENST00000372921.9	2452	13	9	568	9	-20	multi-exon	FALSE	canonical	1	905852	junction_12	419787.4295436372	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	49	1449	60.0	-1	True	NA	NA
PB.1469.6	chr10	-	2080	13	full-splice_match	ANXA7	ENST00000372921.9	2452	13	27	345	27	-1	multi-exon	FALSE	canonical	1	905852	junction_12	419787.4295436372	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	31	1431	35.0	17	True	NA	NA
PB.1469.5	chr10	-	2954	12	novel_in_catalog	ANXA7	novel	2452	13	NA	NA	8	-1	intron_retention	FALSE	canonical	1	905852	junction_11	414878.720187315	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	50	1252	35.0	-2	True	NA	NA
PB.1534.1	chr10	+	7121	10	novel_not_in_catalog	PCGF5	novel	7037	10	NA	NA	-648	-67	any annotated donor/acceptor	FALSE	canonical	1	1615	junction_1	130320.82231635081	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	405	1175	15.0	-1025	False	ATTAAA	-18
PB.1534.2	chr10	+	6952	10	full-splice_match	PCGF5	ENST00000614189.4	7037	10	18	67	18	-67	multi-exon	FALSE	canonical	1	81476	junction_1	113397.90359124322	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	236	1006	15.0	-3	True	ATTAAA	-18
PB.1534.3	chr10	+	6945	9	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	-33	-65	no_combination_of_known_junctions	FALSE	canonical	1	81476	junction_1	128251.72209705168	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	287	997	20.0	-54	True	ATTAAA	-20
PB.1534.4	chr10	+	6904	9	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	-31	-67	no_combination_of_known_junctions	FALSE	canonical	1	16684	junction_2	147255.66166450104	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	383	958	15.0	-52	True	ATTAAA	-18
PB.1534.5	chr10	+	4243	10	full-splice_match	PCGF5	ENST00000614189.4	7037	10	-26	2820	-26	-2820	multi-exon	FALSE	canonical	1	81476	junction_1	113397.90359124322	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	280	1050	20.0	-47	True	CATAAA	-16
PB.1534.6	chr10	+	3711	10	full-splice_match	PCGF5	ENST00000614189.4	7037	10	-23	3349	-23	-3349	multi-exon	FALSE	canonical	1	81476	junction_1	113397.90359124322	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	277	1047	30.0	-44	True	AATAAA	-22
PB.1534.7	chr10	+	3649	9	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	-23	-3351	no_combination_of_known_junctions	FALSE	canonical	1	81476	junction_1	128251.72209705168	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	277	987	35.0	-44	True	AATAAA	-20
PB.1534.8	chr10	+	2744	10	full-splice_match	PCGF5	ENST00000614189.4	7037	10	-23	4316	-23	-4316	multi-exon	FALSE	canonical	1	81476	junction_1	113397.90359124322	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	277	1047	35.0	-44	True	ATTAAA	-20
PB.1534.9	chr10	+	6765	8	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	12	-71	no_combination_of_known_junctions	FALSE	canonical	1	2460	junction_6	144232.18950578492	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	242	823	25.0	-9	True	ATTAAA	-14
PB.10692.1	chr7	+	5529	14	full-splice_match	LMTK2	ENST00000297293.5	8946	14	-15	3432	-15	-3432	multi-exon	FALSE	canonical	1	50942	junction_1	24579.75969762315	NA	0	NA	TRUE	NA	NA	NA	A	coding	1503	4512	309	4820	20.0	-2	True	CATAAA	-16
PB.1695.1	chr10	+	4382	11	full-splice_match	ACADSB	ENST00000358776.6	5859	11	-68	1545	-31	-1545	multi-exon	FALSE	canonical	1	154278	junction_3	44706.42988922287	NA	3	1	TRUE	NA	NA	NA	C	coding	432	1299	83	1381	40.0	3	True	AATAAA	-17
PB.12174.1	chrX	-	4757	1	novel_in_catalog	Z83818.2	novel	433	3	NA	NA	22195	-16353	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	105	318	3054	3371	40.0	2	True	NA	NA
PB.1695.3	chr10	+	7095	10	novel_in_catalog	ACADSB	novel	1599	10	NA	NA	0	-22	intron_retention	FALSE	canonical	1	154278	junction_3	46628.82930304856	NA	3	NA	TRUE	NA	NA	NA	C	coding	274	825	52	876	25.0	-27	True	AATAAA	-17
PB.1695.4	chr10	+	2718	11	full-splice_match	ACADSB	ENST00000358776.6	5859	11	-35	3176	2	1016	multi-exon	FALSE	canonical	1	154278	junction_3	44706.42988922287	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	50	1348	15.0	-25	True	AATAAA	-16
PB.1695.5	chr10	+	5861	11	full-splice_match	ACADSB	ENST00000358776.6	5859	11	-24	22	13	-22	multi-exon	FALSE	canonical	1	154278	junction_3	44706.42988922287	NA	2	1	TRUE	NA	NA	NA	C	coding	432	1299	39	1337	25.0	-14	True	AATAAA	-17
PB.1695.6	chr10	+	3890	11	full-splice_match	ACADSB	ENST00000358776.6	5859	11	-10	1979	-10	-1979	multi-exon	FALSE	canonical	1	154278	junction_3	44706.42988922287	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	25	1323	70.0	0	True	NA	NA
PB.1695.7	chr10	+	1965	11	full-splice_match	ACADSB	ENST00000358776.6	5859	11	-10	3904	-10	288	multi-exon	FALSE	canonical	1	154278	junction_3	44706.42988922287	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	25	1323	45.0	0	True	AATAAA	-21
PB.6907.10	chr2	+	4152	9	novel_in_catalog	NAB1	novel	590	2	NA	NA	44	0	no_combination_of_known_junctions	FALSE	canonical	1	12468	junction_1	75908.45934156071	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	256	1719	25.0	-526	False	AATAAA	-19
PB.10744.5	chr7	-	2238	14	novel_not_in_catalog	PLOD3	novel	1098	7	NA	NA	65	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	275786.7157208103	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	838	1935	15.0	-28	True	AATAAA	-20
PB.8890.1	chr4	+	2813	12	novel_not_in_catalog	METAP1	novel	2791	11	NA	NA	2	-5	any annotated donor/acceptor	FALSE	canonical	1	1660	junction_2	213587.37330250695	NA	7	2	TRUE	NA	NA	NA	C	coding	293	882	441	1322	30.0	-60	False	ATTAAA	-20
PB.11290.5	chr8	-	2723	8	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	-16	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	129101.23846115528	NA	4	NA	TRUE	NA	NA	NA	C	coding	183	552	402	953	35.0	-14	True	NA	NA
PB.6996.5	chr2	+	3039	18	full-splice_match	SMARCAL1	ENST00000358207.9	3056	18	24	-7	2	7	multi-exon	FALSE	canonical	1	20169	junction_1	57108.09695135046	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	128	2992	50.0	2	True	AATAAA	-24
PB.6996.4	chr2	+	3212	18	novel_in_catalog	SMARCAL1	novel	722	3	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	1	5137	junction_1	59547.15054580334	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	276	3140	25.0	-2	True	AATAAA	-18
PB.6996.6	chr2	+	3229	9	incomplete-splice_match	SMARCAL1	ENST00000358207.9	3056	18	24	46063	2	4182	3prime_fragment	FALSE	canonical	1	20169	junction_1	56972.588583101744	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	128	1828	5.0	2	True	NA	NA
PB.6996.1	chr2	+	3199	18	full-splice_match	SMARCAL1	ENST00000357276.8	3271	18	68	4	-28	-4	multi-exon	FALSE	canonical	1	56074	junction_1	51797.41333169709	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	263	3127	25.0	-2	True	AATAAA	-18
PB.6996.3	chr2	+	3156	18	novel_in_catalog	SMARCAL1	novel	722	3	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	1	8531	junction_1	58986.72799025676	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	214	3078	10.0	2	True	AATAAA	-24
PB.6996.2	chr2	+	3035	17	novel_in_catalog	SMARCAL1	novel	722	3	NA	NA	-26	-33	no_combination_of_known_junctions	FALSE	canonical	1	4596	junction_16	55687.823105929936	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	261	2957	85.0	0	True	NA	NA
PB.8513.20	chr3	-	2099	4	full-splice_match	PHC3	ENST00000497658.5	2087	4	-12	0	0	0	multi-exon	FALSE	canonical	1	110362	junction_3	101124.83376610426	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	31	486	20.0	-13	True	ATTAAA	-21
PB.10983.9	chr8	+	2264	13	novel_not_in_catalog	BLK	novel	2159	12	NA	NA	-7486	0	any annotated donor/acceptor	FALSE	canonical	1	4846	junction_1	52603.120942675276	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	257	1774	10.0	-7804	False	AATAAA	-15
PB.11124.8	chr8	+	3284	16	full-splice_match	MCM4	ENST00000262105.6	4183	16	2	897	2	4	multi-exon	FALSE	canonical	1	413119	junction_1	225197.5576610605	NA	1	NA	TRUE	NA	NA	NA	C	coding	863	2592	208	2799	100.0	-19	True	NA	NA
PB.7983.1	chr3	+	3621	2	incomplete-splice_match	OXSM	ENST00000280701.7	1519	3	-9	1	-9	-1	intron_retention	TRUE	canonical	1	109095	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	109	1089	45.0	-23	False	ATTAAA	-19
PB.7983.2	chr3	+	4454	1	genic	OXSM	novel	NA	NA	NA	NA	-2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	326	981	944	1924	40.0	-16	True	ATTAAA	-17
PB.7983.3	chr3	+	2357	2	novel_in_catalog	OXSM	novel	899	2	NA	NA	1	-3	intron_retention	FALSE	canonical	1	155919	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	941	2320	40.0	-13	True	ATTAAA	-17
PB.7983.4	chr3	+	1514	3	full-splice_match	OXSM	ENST00000280701.7	1519	3	4	1	4	-1	multi-exon	FALSE	canonical	1	109095	junction_1	23412.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	96	1475	45.0	-10	True	ATTAAA	-19
PB.2229.1	chr11	+	2245	14	novel_not_in_catalog	PIWIL4	novel	1901	14	NA	NA	21123	2	any annotated donor/acceptor	FALSE	canonical	1	379	junction_1	13820.028010572834	NA	0	NA	TRUE	NA	NA	NA	A	coding	498	1497	318	1814	20.0	4379	False	AATAAA	-16
PB.7983.6	chr3	+	2159	3	novel_in_catalog	OXSM	novel	899	2	NA	NA	12	-3	intron_retention	FALSE	canonical	1	7885	junction_1	74017.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	743	2122	40.0	12	True	ATTAAA	-17
PB.10518.5	chr7	-	2516	10	novel_in_catalog	POLM	novel	2444	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	16142	junction_3	42306.403848794376	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	155	1183	20.0	32	True	AAAACA	-7
PB.8890.3	chr4	+	2803	12	novel_in_catalog	METAP1	novel	2791	11	NA	NA	-20	-5	combination_of_known_junctions	FALSE	canonical	1	11258	junction_2	211912.7048837729	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	431	1312	30.0	1	True	ATTAAA	-20
PB.1769.1	chr11	-	2579	4	full-splice_match	ZNF195	ENST00000354599.10	2970	4	-65	456	8	-280	multi-exon	FALSE	canonical	1	105449	junction_1	82141.35359786135	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	399	1844	15.0	7	False	AGTAAA	-20
PB.1769.2	chr11	-	2674	5	full-splice_match	ZNF195	ENST00000005082.13	2021	5	-45	-608	6	-283	multi-exon	FALSE	canonical	1	38515	junction_2	92120.64181550192	NA	2	NA	TRUE	NA	NA	NA	C	coding	606	1821	122	1942	10.0	-23	True	AGTAAA	-17
PB.1769.3	chr11	-	2658	5	novel_in_catalog	ZNF195	novel	881	4	NA	NA	4	-285	combination_of_known_junctions	FALSE	canonical	1	47568	junction_4	95106.56560012038	NA	2	NA	TRUE	NA	NA	NA	C	coding	561	1686	243	1928	5.0	3	True	AGTAAA	-15
PB.1769.4	chr11	-	2559	5	novel_in_catalog	ZNF195	novel	881	4	NA	NA	0	-286	combination_of_known_junctions	FALSE	canonical	1	6149	junction_1	113387.28739259088	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	385	1830	5.0	-1	True	AGTAAA	-14
PB.1769.5	chr11	-	2494	5	full-splice_match	ZNF195	ENST00000005082.13	2021	5	-75	-398	-10	170	multi-exon	FALSE	canonical	1	38515	junction_2	92120.64181550192	NA	3	NA	TRUE	NA	NA	NA	C	coding	530	1593	380	1972	45.0	26	False	AATATA	-33
PB.1769.6	chr11	-	3005	11	novel_not_in_catalog	ZNF195	novel	881	4	NA	NA	-15	201	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	83339.23461035624	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	860	2452	25.0	21	False	NA	NA
PB.1769.7	chr11	-	2375	4	full-splice_match	ZNF195	ENST00000354599.10	2970	4	-43	638	-7	201	multi-exon	FALSE	canonical	1	105449	junction_1	82141.35359786135	NA	2	NA	TRUE	NA	NA	NA	C	coding	557	1674	149	1822	25.0	29	False	NA	NA
PB.1769.9	chr11	-	2447	5	novel_in_catalog	ZNF195	novel	881	4	NA	NA	0	200	combination_of_known_junctions	FALSE	canonical	1	47568	junction_4	95106.56560012038	NA	2	NA	TRUE	NA	NA	NA	C	coding	561	1686	210	1895	30.0	36	False	NA	NA
PB.3165.8	chr13	+	2039	10	novel_not_in_catalog	SETDB2	novel	6139	15	NA	NA	-64	-3021	any annotated donor/acceptor	FALSE	canonical	1	11809	junction_6	43907.46648589368	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	890	1606	65.0	36	True	AATATA	-6
PB.3165.9	chr13	+	3115	17	novel_not_in_catalog	SETDB2	novel	6139	15	NA	NA	-58	-3148	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	55125.923199752404	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	1812	3110	25.0	42	True	AATAAA	-27
PB.6513.2	chr2	-	4292	5	novel_in_catalog	SPRED2	novel	4097	6	NA	NA	95	-1	intron_retention	FALSE	canonical	1	15845	junction_3	66840.32499359948	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	978	1643	10.0	0	True	TATAAA	-14
PB.10182.3	chr6	+	2643	15	full-splice_match	DCBLD1	ENST00000338728.9	3626	15	-17	1000	5	818	multi-exon	FALSE	canonical	1	80995	junction_1	19900.966093486055	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	138	2285	30.0	-29	True	AATAAA	-23
PB.3165.1	chr13	+	3408	14	novel_in_catalog	SETDB2	novel	6139	15	NA	NA	-140	-2834	combination_of_known_junctions	FALSE	canonical	1	66159	junction_5	32722.459472312894	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	966	3089	25.0	0	True	NA	NA
PB.3165.2	chr13	+	1700	1	genic	SETDB2	novel	NA	NA	NA	NA	-137	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	3	True	NA	NA
PB.3165.3	chr13	+	3127	15	full-splice_match	SETDB2	ENST00000354234.8	6139	15	-136	3148	-136	-3147	multi-exon	FALSE	canonical	1	11287	junction_5	47003.01790685403	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	962	3121	30.0	4	True	AATAAA	-28
PB.3165.4	chr13	+	4188	6	incomplete-splice_match	SETDB2	ENST00000258672.9	2138	11	-505	6432	-120	-6432	3prime_fragment	FALSE	canonical	1	66159	junction_5	26069.30614803547	NA	3	NA	TRUE	NA	NA	NA	C	coding	290	873	946	1818	55.0	20	True	NA	NA
PB.3165.5	chr13	+	2936	14	novel_in_catalog	SETDB2	novel	6139	15	NA	NA	-3	-3169	combination_of_known_junctions	FALSE	canonical	1	66159	junction_5	32722.459472312894	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2106	829	2934	70.0	5	True	AATAAA	-6
PB.3165.6	chr13	+	2779	12	novel_in_catalog	SETDB2	novel	6139	15	NA	NA	-100	2722	combination_of_known_junctions	FALSE	canonical	1	66159	junction_5	30329.6837132991	NA	9	NA	TRUE	NA	NA	NA	C	coding	618	1854	926	2779	35.0	0	True	NA	NA
PB.3165.7	chr13	+	2674	13	novel_in_catalog	SETDB2	novel	6139	15	NA	NA	-98	-3169	no_combination_of_known_junctions	FALSE	canonical	1	18017	junction_1	41032.96312409153	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2070	603	2672	70.0	2	True	AATAAA	-6
PB.2460.9	chr12	+	3653	5	full-splice_match	CLEC2D	ENST00000290855.10	5279	5	0	1626	0	-1626	multi-exon	FALSE	canonical	1	169138	junction_4	77565.52369247242	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	1299	1955	50.0	-4	True	NA	NA
PB.2460.8	chr12	+	1911	6	novel_not_in_catalog	CLEC2D	novel	571	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	5945	junction_5	126885.45834318447	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	24	575	25.0	-5	True	NA	NA
PB.2460.3	chr12	+	1921	5	full-splice_match	CLEC2D	ENST00000479877.5	1855	5	-62	-4	-47	4	multi-exon	FALSE	canonical	1	108964	junction_4	98755.09604667245	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	70	534	20.0	-4825	False	NA	NA
PB.2460.2	chr12	+	2148	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	-48	435	combination_of_known_junctions	FALSE	canonical	1	10502	junction_4	131993.15425218083	NA	7	NA	TRUE	NA	NA	NA	C	coding	218	657	1471	2127	35.0	-4826	False	AAGAAA	-18
PB.2460.1	chr12	+	1822	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	-53	1	intron_retention	FALSE	canonical	1	108964	junction_5	95373.27489103013	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	76	627	20.0	-4831	False	NA	NA
PB.2460.7	chr12	+	2277	5	full-splice_match	CLEC2D	ENST00000290855.10	5279	5	-5	3007	-5	731	multi-exon	FALSE	canonical	1	169138	junction_4	77565.52369247242	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	1304	1960	80.0	-9	True	AATAAA	-21
PB.2460.6	chr12	+	3345	6	full-splice_match	CLEC2D	ENST00000261340.11	935	6	-5	-2405	-5	1717	multi-exon	FALSE	canonical	1	74366	junction_5	105211.63052628735	NA	8	1	TRUE	NA	NA	NA	C	coding	218	657	1386	2042	10.0	-9	True	NA	NA
PB.2460.5	chr12	+	3930	5	full-splice_match	CLEC2D	ENST00000290855.10	5279	5	-5	1354	-5	-1354	multi-exon	FALSE	canonical	1	169138	junction_4	77565.52369247242	NA	9	NA	TRUE	NA	NA	NA	C	coding	218	657	1304	1960	30.0	-9	True	NA	NA
PB.2460.4	chr12	+	1965	5	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	-15	-4	intron_retention	FALSE	canonical	1	39893	junction_3	121696.4621928263	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	38	406	20.0	-19	True	NA	NA
PB.7296.1	chr20	+	5103	33	novel_not_in_catalog	PLCG1	novel	5285	33	NA	NA	7	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	162246.74429773574	NA	0	NA	TRUE	NA	NA	NA	B	coding	1256	3771	124	3894	10.0	1	True	AATAAA	-18
PB.1775.4	chr11	-	1886	7	full-splice_match	TRIM21	ENST00000254436.7	1924	7	12	26	12	-26	multi-exon	FALSE	canonical	1	151614	junction_6	69565.09919891982	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	102	1529	75.0	-12	True	NA	NA
PB.1775.3	chr11	-	5269	3	novel_in_catalog	TRIM21	novel	706	3	NA	NA	23	-26	intron_retention	FALSE	canonical	1	151614	junction_2	80630.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	4325	4912	75.0	-1	True	NA	NA
PB.1775.2	chr11	-	2607	6	novel_in_catalog	TRIM21	novel	706	3	NA	NA	1	-26	intron_retention	FALSE	canonical	1	151614	junction_5	75234.4592739258	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	113	874	75.0	-23	True	NA	NA
PB.1775.1	chr11	-	3923	5	novel_in_catalog	TRIM21	novel	706	3	NA	NA	-6	-26	intron_retention	FALSE	canonical	1	151614	junction_4	74811.14596894971	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	120	899	75.0	-30	True	NA	NA
PB.4036.3	chr15	-	2122	12	full-splice_match	CPEB1	ENST00000615198.4	2112	12	-32	22	-32	0	multi-exon	FALSE	canonical	1	5872	junction_11	26251.557819812184	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	140	1825	100.0	754	False	NA	NA
PB.7296.3	chr20	+	5219	32	incomplete-splice_match	PLCG1	ENST00000244007.7	5285	33	550	1	-40	-1	5prime_fragment	FALSE	canonical	1	240228	junction_1	124451.19480335795	NA	0	NA	TRUE	NA	NA	NA	B	coding	1291	3876	133	4008	10.0	-33	True	AATAAA	-20
PB.554.5	chr1	-	3649	1	novel_in_catalog	CNN3	novel	1974	6	NA	NA	120	-21277	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	192	579	2	580	75.0	6	True	NA	NA
PB.3149.29	chr13	-	2603	13	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-8192	no_combination_of_known_junctions	FALSE	canonical	1	18436	junction_12	115780.74270205254	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2565	38	2602	45.0	-1	True	NA	NA
PB.3149.28	chr13	-	2941	13	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	-8	-8190	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_12	104956.54110101423	NA	1	NA	TRUE	NA	NA	NA	B	coding	856	2568	374	2941	40.0	5604	False	NA	NA
PB.3474.15	chr14	+	4205	11	full-splice_match	PCNX4	ENST00000406854.5	4666	11	335	126	68	-121	multi-exon	FALSE	canonical	1	85973	junction_2	85077.90097669313	NA	3	NA	TRUE	NA	NA	NA	C	coding	1172	3519	220	3738	25.0	-56	False	AATATA	-16
PB.3036.6	chr13	+	3410	15	novel_in_catalog	MPHOSPH8	novel	4235	14	NA	NA	-12	425	combination_of_known_junctions	FALSE	canonical	1	14512	junction_13	132281.85317452168	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	81	2720	95.0	5	True	NA	NA
PB.3474.13	chr14	+	4324	11	full-splice_match	PCNX4	ENST00000406854.5	4666	11	337	5	70	0	multi-exon	FALSE	canonical	1	85973	junction_2	85077.90097669313	NA	0	NA	TRUE	NA	NA	NA	C	coding	1172	3519	218	3736	40.0	-54	False	AATAAA	-19
PB.3474.12	chr14	+	2544	9	incomplete-splice_match	PCNX4	ENST00000406854.5	4666	11	268	10385	1	156	3prime_fragment	FALSE	canonical	1	85973	junction_2	82358.62909252437	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2256	287	2542	50.0	-10	True	NA	NA
PB.3474.11	chr14	+	3866	1	novel_in_catalog	PCNX4	novel	17339	10	NA	NA	-1	-15366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	121	366	2240	2605	80.0	-67	True	NA	NA
PB.3474.10	chr14	+	3641	10	full-splice_match	PCNX4	ENST00000317623.8	17339	10	287	13411	12	1	multi-exon	FALSE	canonical	1	83263	junction_1	73965.3055166599	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	236	3052	35.0	1	True	AATAAA	-20
PB.3149.21	chr13	-	3053	15	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	159	-7505	combination_of_known_junctions	FALSE	canonical	1	24494	junction_14	144510.8351262377	NA	1	NA	TRUE	NA	NA	NA	B	coding	954	2862	191	3052	75.0	5845	False	NA	NA
PB.3149.20	chr13	-	3352	16	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	19	-7481	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	183538.23430765956	NA	3	1	TRUE	NA	NA	NA	B	coding	823	2469	883	3351	70.0	0	True	NA	NA
PB.3149.23	chr13	-	3209	15	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	-10	-7505	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	172493.14806499548	NA	0	NA	TRUE	NA	NA	NA	B	coding	787	2361	848	3208	75.0	-1	True	NA	NA
PB.3149.22	chr13	-	3251	15	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-7505	any annotated donor/acceptor	FALSE	canonical	1	9503	junction_3	160089.36402152493	NA	0	NA	TRUE	NA	NA	NA	B	coding	972	2916	335	3250	75.0	-1	True	NA	NA
PB.3149.25	chr13	-	3026	15	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	-8	-7505	any annotated donor/acceptor	FALSE	canonical	1	33417	junction_3	159365.56530782508	NA	1	1	TRUE	NA	NA	NA	B	coding	982	2946	80	3025	75.0	5604	False	NA	NA
PB.3149.24	chr13	-	3197	14	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-7505	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_13	111530.19961804175	NA	0	NA	TRUE	NA	NA	NA	B	coding	954	2862	335	3196	75.0	-1	True	NA	NA
PB.11625.74	chr9	-	2034	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	457	1374	221	1594	10.0	-17	True	AATAAA	-13
PB.3149.26	chr13	-	2848	11	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	19	-7505	no_combination_of_known_junctions	FALSE	canonical	1	1549	junction_10	141220.9640076501	NA	1	NA	TRUE	NA	NA	NA	B	coding	787	2361	487	2847	75.0	0	True	NA	NA
PB.3036.2	chr13	+	3412	15	novel_not_in_catalog	MPHOSPH8	novel	4235	14	NA	NA	-32	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	123255.70636028358	NA	3	NA	TRUE	NA	NA	NA	C	coding	860	2583	101	2683	20.0	-15	True	AATAAA	-22
PB.841.40	chr1	+	2194	8	incomplete-splice_match	IFI16	ENST00000448393.6	2245	9	1006	-29	14	0	5prime_fragment	FALSE	canonical	1	196353	junction_5	334184.6996509199	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	395	1942	20.0	-1	True	AATAAA	-26
PB.5836.1	chr19	-	1479	5	full-splice_match	RAB3A	ENST00000222256.8	1528	5	32	17	0	-2	multi-exon	TRUE	canonical	1	354402	junction_4	169013.90106197627	NA	3	NA	TRUE	NA	NA	NA	A	coding	220	663	148	810	15.0	-1	True	AATAAA	-15
PB.719.10	chr1	-	2897	5	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	-13	-6	intron_retention	FALSE	canonical	1	6022	junction_4	484189.66205732594	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	327	767	75.0	-1	True	AATAAA	-15
PB.10518.9	chr7	-	2596	11	novel_in_catalog	POLM	novel	2444	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	17588	junction_4	43777.68469163256	NA	4	NA	TRUE	NA	NA	NA	C	coding	345	1038	32	1069	20.0	41	True	AAAACA	-6
PB.9141.1	chr5	-	2287	1	antisense	novelGene_LINC02199_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.11700.8	chr9	+	2393	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	-15	8133	-15	-6805	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	263	2236	50.0	-44	True	CATAAA	-17
PB.179.2	chr1	-	2574	7	novel_not_in_catalog	RUNX3	novel	4340	6	NA	NA	-79	-23	any annotated donor/acceptor	FALSE	canonical	1	412	junction_6	140509.5003590109	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	215	1504	95.0	-10	False	NA	NA
PB.4369.1	chr16	-	1114	3	full-splice_match	DCTPP1	ENST00000319285.4	1222	3	27	81	-18	-2	multi-exon	FALSE	canonical	1	916793	junction_1	30646.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	170	513	69	581	25.0	-34	True	NA	NA
PB.6958.6	chr2	-	1631	12	novel_in_catalog	WDR12	novel	8100	13	NA	NA	597	-7	no_combination_of_known_junctions	FALSE	canonical	1	920	junction_6	149037.93698028312	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	154	843	30.0	43	True	ATTAAA	-21
PB.173.1	chr1	-	4583	7	full-splice_match	IFNLR1	ENST00000327535.5	4549	7	-35	1	-35	-1	multi-exon	FALSE	canonical	1	21563	junction_6	6088.77300173579	NA	3	NA	TRUE	NA	NA	NA	C	coding	520	1563	49	1611	35.0	-40	False	AATAAA	-34
PB.5718.3	chr19	+	4333	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	-30	-494	no_combination_of_known_junctions	FALSE	canonical	1	19211	junction_15	174808.55266868693	NA	2	NA	TRUE	NA	NA	NA	C	coding	834	2505	118	2622	75.0	2	True	NA	NA
PB.10518.8	chr7	-	2715	12	novel_not_in_catalog	POLM	novel	2444	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	221	junction_6	59950.759531716954	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	161	802	20.0	26	True	AAAACA	-6
PB.6958.4	chr2	-	1704	13	full-splice_match	WDR12	ENST00000261015.4	8100	13	542	5854	542	-35	multi-exon	FALSE	canonical	1	164490	junction_11	105760.20624493988	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	209	1480	45.0	-12	True	TATAAA	-37
PB.9632.14	chr5	-	2427	6	novel_not_in_catalog	KIAA1191	novel	2991	9	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	178775.53134072907	NA	4	1	TRUE	NA	NA	NA	C	coding	98	297	596	892	20.0	-33	True	AATAAA	-19
PB.807.24	chr1	-	2631	11	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28420	-44731	no_combination_of_known_junctions	FALSE	canonical	1	11591	junction_1	269115.1472375533	NA	0	NA	TRUE	NA	NA	NA	B	coding	730	2193	239	2431	15.0	21	True	NA	NA
PB.9991.5	chr6	+	3857	35	novel_not_in_catalog	UBR2	novel	7857	47	NA	NA	70263	-2222	any annotated donor/acceptor	FALSE	canonical	1	1803	junction_1	69209.44570261828	NA	2	NA	TRUE	NA	NA	NA	C	coding	1239	3720	29	3748	15.0	NA	False	AATAAA	-19
PB.9991.4	chr6	+	4500	31	incomplete-splice_match	UBR2	ENST00000372901.1	7857	47	-36	30557	-36	-30557	3prime_fragment	FALSE	canonical	1	134161	junction_10	58429.11518896684	NA	1	NA	TRUE	NA	NA	NA	C	coding	1179	3540	295	3834	80.0	-3	True	NA	NA
PB.9991.3	chr6	+	5486	47	full-splice_match	UBR2	ENST00000372901.1	7857	47	149	2222	149	-2222	multi-exon	FALSE	canonical	1	134161	junction_10	61759.473865659216	NA	0	NA	TRUE	NA	NA	NA	C	coding	1755	5268	110	5377	15.0	13	True	AATAAA	-19
PB.9991.2	chr6	+	7946	47	full-splice_match	UBR2	ENST00000372899.5	7857	47	-89	0	-89	0	multi-exon	TRUE	canonical	1	25639	junction_11	72313.28830599658	NA	2	NA	TRUE	NA	NA	NA	C	coding	1755	5268	348	5615	25.0	-1	True	AATAAA	-20
PB.9991.1	chr6	+	3107	26	incomplete-splice_match	UBR2	ENST00000372901.1	7857	47	-52	37856	-52	35297	3prime_fragment	FALSE	canonical	1	134161	junction_10	55508.63273003938	NA	1	NA	TRUE	NA	NA	NA	C	coding	932	2796	311	3106	65.0	-19	True	AAAACA	-39
PB.6958.2	chr2	-	1617	6	novel_not_in_catalog	WDR12	novel	8100	13	NA	NA	582	2144	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	189719.57193542263	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	169	642	20.0	28	True	AATAAA	-22
PB.625.3	chr1	-	3720	19	novel_not_in_catalog	PHTF1	novel	4314	12	NA	NA	-64	-3	intron_retention	FALSE	canonical	1	21256	junction_16	59965.690934457794	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	1061	3223	15.0	-68	False	AATAAA	-16
PB.625.2	chr1	-	4787	18	novel_not_in_catalog	PHTF1	novel	4314	12	NA	NA	-59	-3	intron_retention	FALSE	canonical	1	13007	junction_2	55759.88785378901	NA	3	NA	TRUE	NA	NA	NA	C	coding	694	2085	846	2930	15.0	-63	True	AATAAA	-16
PB.625.1	chr1	-	3432	19	novel_in_catalog	PHTF1	novel	4314	12	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	1	20637	junction_18	54527.1626836876	NA	2	NA	TRUE	NA	NA	NA	C	coding	762	2289	647	2935	15.0	-38	True	AATAAA	-16
PB.625.7	chr1	-	3503	20	novel_not_in_catalog	PHTF1	novel	4314	12	NA	NA	-56	-5	any annotated donor/acceptor	FALSE	canonical	1	7155	junction_3	62637.67847013029	NA	3	1	TRUE	NA	NA	NA	C	coding	694	2085	669	2753	20.0	-60	True	AATAAA	-14
PB.625.6	chr1	-	4482	19	novel_not_in_catalog	PHTF1	novel	4314	12	NA	NA	-45	-5	any annotated donor/acceptor	FALSE	canonical	1	13007	junction_2	58040.74487518804	NA	2	NA	TRUE	NA	NA	NA	C	coding	694	2085	543	2627	20.0	-49	True	AATAAA	-14
PB.625.5	chr1	-	3340	19	full-splice_match	PHTF1	ENST00000369604.5	3273	19	-70	3	-57	-3	multi-exon	FALSE	canonical	1	64421	junction_18	49322.14722041305	NA	1	NA	TRUE	NA	NA	NA	C	coding	762	2289	555	2843	15.0	-61	True	AATAAA	-16
PB.6818.3	chr2	+	6364	8	incomplete-splice_match	CERS6	ENST00000305747.10	7217	10	105316	4	104929	-1	5prime_fragment	FALSE	canonical	1	225118	junction_5	24776.686114497363	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	144	893	20.0	NA	False	AATAAA	-19
PB.11771.10	chr9	-	2730	4	full-splice_match	PDCL	ENST00000259467.8	2813	4	-13	96	-13	-96	multi-exon	FALSE	canonical	1	230087	junction_3	58248.26971392941	NA	5	NA	TRUE	NA	NA	NA	C	coding	301	906	180	1085	15.0	-57	False	NA	NA
PB.9751.5	chr6	+	2332	9	full-splice_match	NOL7	ENST00000474485.1	920	9	-245	-1167	17	1167	multi-exon	FALSE	canonical	1	27287	junction_8	539758.4295689455	NA	2	1	TRUE	NA	NA	NA	C	coding	240	723	67	789	25.0	5	True	AATAAA	-13
PB.625.9	chr1	-	2878	17	novel_in_catalog	PHTF1	novel	4314	12	NA	NA	-4	-153	combination_of_known_junctions	FALSE	canonical	1	20637	junction_16	55435.82576051339	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	617	2701	35.0	-8	True	ATTAAA	-23
PB.625.8	chr1	-	3358	20	novel_not_in_catalog	PHTF1	novel	4314	12	NA	NA	5	-7	any annotated donor/acceptor	FALSE	canonical	1	21256	junction_16	61181.1751135222	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	703	2865	20.0	1	True	AATAAA	-12
PB.5766.1	chr19	+	1847	1	novel_in_catalog	NFIX	novel	1727	10	NA	NA	26917	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-1702	False	NA	NA
PB.5718.9	chr19	+	3533	18	full-splice_match	LDLR	ENST00000558518.5	3617	18	101	-17	0	17	multi-exon	FALSE	canonical	1	405226	junction_1	108088.50705195128	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	87	2669	15.0	0	True	NA	NA
PB.710.1	chr1	+	1233	1	full-splice_match	AC239868.1	ENST00000577853.1	1234	1	3	-2	3	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	121	366	328	693	10.0	8666	False	TTTAAA	-7
PB.8306.11	chr3	+	2290	11	incomplete-splice_match	ATP6V1A	ENST00000470455.5	2266	16	37777	-710	-16325	710	5prime_fragment	FALSE	canonical	1	400780	junction_6	71796.05782882511	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	69	1310	85.0	439	False	AATATA	-17
PB.8306.12	chr3	+	3393	7	incomplete-splice_match	ATP6V1A	ENST00000273398.7	4591	15	47953	2	-6167	-2	5prime_fragment	FALSE	canonical	1	400780	junction_2	64814.414688958066	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	14	766	15.0	NA	False	AATAAA	-16
PB.11868.4	chr9	-	2813	20	full-splice_match	DDX31	ENST00000438527.7	2814	20	25	-24	25	24	multi-exon	FALSE	canonical	1	103930	junction_4	30416.093554094234	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	69	2309	30.0	10	True	AATATA	-21
PB.11868.5	chr9	-	2915	20	novel_not_in_catalog	DDX31	novel	2343	2	NA	NA	-29	0	any annotated donor/acceptor	FALSE	canonical	1	15438	junction_5	41014.89880437983	NA	2	NA	TRUE	NA	NA	NA	C	coding	476	1431	339	1769	5.0	-44	False	NA	NA
PB.11868.6	chr9	-	2673	18	novel_not_in_catalog	DDX31	novel	2343	2	NA	NA	19	0	any annotated donor/acceptor	FALSE	canonical	1	12644	junction_2	49904.42119647333	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1806	291	2096	5.0	4	True	NA	NA
PB.11868.7	chr9	-	2660	18	novel_in_catalog	DDX31	novel	2343	2	NA	NA	57	0	no_combination_of_known_junctions	FALSE	canonical	1	12644	junction_2	41448.82860015781	NA	9	1	TRUE	NA	NA	NA	C	coding	514	1545	253	1797	5.0	12	True	NA	NA
PB.11868.1	chr9	-	4152	20	novel_not_in_catalog	DDX31	novel	2343	2	NA	NA	28	2	any annotated donor/acceptor	FALSE	canonical	1	15438	junction_5	41014.89880437983	NA	16	2	TRUE	NA	NA	NA	C	coding	548	1647	66	1712	30.0	13	True	AATAAA	-18
PB.11868.2	chr9	-	4194	20	full-splice_match	DDX31	ENST00000372159.7	4577	20	382	1	8	-1	multi-exon	FALSE	canonical	1	103930	junction_4	30416.093554094234	NA	1	NA	TRUE	NA	NA	NA	C	coding	746	2241	86	2326	25.0	-7	True	AATAAA	-15
PB.11868.3	chr9	-	3695	20	full-splice_match	DDX31	ENST00000372159.7	4577	20	413	469	39	-469	multi-exon	FALSE	canonical	1	103930	junction_4	30416.093554094234	NA	7	1	TRUE	NA	NA	NA	C	coding	674	2025	271	2295	10.0	-6	True	ATTAAA	-20
PB.1320.5	chr10	+	2592	11	novel_in_catalog	STAM	novel	2972	14	NA	NA	-28	-6	no_combination_of_known_junctions	FALSE	canonical	1	1550	junction_2	109825.81320805232	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	661	1464	20.0	-74	False	ATTAAA	-27
PB.1320.4	chr10	+	2764	12	novel_in_catalog	STAM	novel	2972	14	NA	NA	31	-5	no_combination_of_known_junctions	FALSE	canonical	1	11447	junction_2	102865.95252283309	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	346	1635	15.0	4	True	ATTAAA	-28
PB.1320.7	chr10	+	2762	14	full-splice_match	STAM	ENST00000377524.7	2972	14	65	145	-18	-145	multi-exon	FALSE	canonical	1	192310	junction_2	59794.031890052705	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	151	1773	25.0	-64	False	AAGAAA	-23
PB.1320.6	chr10	+	3822	14	full-splice_match	STAM	ENST00000377524.7	2972	14	57	-907	-26	907	multi-exon	FALSE	canonical	1	192310	junction_2	59794.031890052705	NA	4	NA	TRUE	NA	NA	NA	C	coding	540	1623	159	1781	25.0	-72	False	TATAAA	-23
PB.1320.1	chr10	+	3274	14	full-splice_match	STAM	ENST00000377524.7	2972	14	25	-327	25	327	multi-exon	FALSE	canonical	1	192310	junction_2	59794.031890052705	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	191	1813	30.0	-2	True	TATAAA	-25
PB.1320.3	chr10	+	2189	14	full-splice_match	STAM	ENST00000377524.7	2972	14	57	726	-26	-726	multi-exon	FALSE	canonical	1	192310	junction_2	59794.031890052705	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	159	1781	25.0	-72	False	AATATA	-19
PB.1320.2	chr10	+	2279	14	full-splice_match	STAM	ENST00000377524.7	2972	14	66	627	-17	-627	multi-exon	FALSE	canonical	1	192310	junction_2	59794.031890052705	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	150	1772	40.0	-63	False	TTTAAA	-7
PB.7920.1	chr3	-	1462	12	full-splice_match	CAMK1	ENST00000256460.7	1488	12	23	3	7	2	multi-exon	FALSE	canonical	1	122654	junction_11	90252.144864236	NA	1	NA	TRUE	NA	NA	NA	A	coding	370	1113	156	1268	15.0	-8	True	AATAAA	-18
PB.8995.1	chr4	-	7024	8	full-splice_match	SETD7	ENST00000274031.7	7365	8	338	3	-198	-3	multi-exon	FALSE	canonical	1	220658	junction_7	37037.18554840444	NA	4	NA	TRUE	NA	NA	NA	C	coding	360	1083	318	1400	10.0	-18	True	ATTAAA	-15
PB.1320.9	chr10	+	2994	15	novel_in_catalog	STAM	novel	2972	14	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	1	4375	junction_2	121772.31500961547	NA	5	1	TRUE	NA	NA	NA	C	coding	478	1437	430	1866	20.0	0	True	ATTAAA	-27
PB.1320.8	chr10	+	2850	14	full-splice_match	STAM	ENST00000377524.7	2972	14	116	6	33	-6	multi-exon	FALSE	canonical	1	192310	junction_2	59794.031890052705	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	100	1722	20.0	-13	True	ATTAAA	-27
PB.2663.10	chr12	+	3244	5	full-splice_match	CDK2	ENST00000556146.1	911	5	-632	-1701	0	4	multi-exon	FALSE	canonical	1	545750	junction_4	92739.1478944437	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	1182	1784	10.0	0	True	ATTAAA	-25
PB.2663.11	chr12	+	2170	7	novel_not_in_catalog	CDK2	novel	2296	7	NA	NA	0	4	intron_retention	FALSE	canonical	1	319	junction_6	254992.68531513255	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	180	1007	10.0	0	True	ATTAAA	-25
PB.2663.12	chr12	+	2161	6	novel_in_catalog	CDK2	novel	2296	7	NA	NA	0	4	intron_retention	FALSE	canonical	1	9514	junction_1	377469.9425212026	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	180	998	10.0	0	True	ATTAAA	-25
PB.2663.13	chr12	+	4182	11	novel_in_catalog	CDK2	novel	2296	7	NA	NA	1	21901	intron_retention	FALSE	canonical	1	3231	junction_6	343241.40131081216	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	178	978	85.0	2	True	NA	NA
PB.2663.14	chr12	+	2134	6	full-splice_match	CDK2	ENST00000354056.4	1260	6	2	-876	-1	4	multi-exon	FALSE	canonical	1	28520	junction_4	370743.7546494883	NA	2	NA	TRUE	NA	NA	NA	C	coding	264	795	177	971	10.0	3	True	ATTAAA	-25
PB.2663.15	chr12	+	4368	12	novel_not_in_catalog	CDK2	novel	2296	7	NA	NA	4	21901	intron_retention	FALSE	canonical	1	1176	junction_7	351164.7303682348	NA	3	NA	TRUE	NA	NA	NA	C	coding	298	897	172	1068	85.0	8	True	NA	NA
PB.2663.16	chr12	+	2069	6	full-splice_match	CDK2	ENST00000555408.5	2598	6	38	491	4	-18	multi-exon	FALSE	canonical	1	545750	junction_4	220902.98602182814	NA	3	NA	TRUE	NA	NA	NA	C	coding	208	627	1174	1800	65.0	8	True	NA	NA
PB.2663.18	chr12	+	3438	6	full-splice_match	RAB5B	ENST00000553116.5	3322	6	-137	21	-137	-21	multi-exon	FALSE	canonical	1	1497	junction_1	462181.7875141339	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	318	965	85.0	-362	False	NA	NA
PB.2663.19	chr12	+	3251	6	full-splice_match	RAB5B	ENST00000360299.9	5340	6	91	1998	1	-21	multi-exon	FALSE	canonical	1	111788	junction_1	423461.5066298235	NA	15	NA	TRUE	NA	NA	NA	C	coding	215	648	131	778	85.0	24	True	NA	NA
PB.9255.11	chr5	+	2764	12	full-splice_match	TRAPPC13	ENST00000231526.8	2715	12	5	-54	0	49	multi-exon	FALSE	canonical	1	86942	junction_7	58033.84920390416	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	17	1252	30.0	7	True	ATTAAA	-17
PB.916.10	chr1	+	3919	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	9	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	2	NA	TRUE	NA	NA	NA	C	coding	160	483	64	546	30.0	13	True	AATAAA	-20
PB.4375.1	chr16	-	2541	3	novel_not_in_catalog	AC002310.4	novel	377	2	NA	NA	-289	-19537	any annotated donor/acceptor	FALSE	canonical	1	1097	junction_2	28365.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-67	False	AGTAAA	-17
PB.1330.1	chr10	-	2350	1	antisense	novelGene_SPAG6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-830	False	NA	NA
PB.1137.3	chr1	-	2515	4	full-splice_match	DUSP10	ENST00000366899.3	2676	4	87	74	0	-15	multi-exon	FALSE	canonical	1	177829	junction_1	26646.787252666854	NA	10	NA	TRUE	NA	NA	NA	C	coding	482	1449	153	1601	70.0	-1	True	AAGAAA	-28
PB.10341.2	chr6	-	4231	9	novel_not_in_catalog	PHF10	novel	1589	12	NA	NA	-19	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	118308.61676927583	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	55	1047	15.0	1295	False	AATAAA	-20
PB.8662.3	chr4	+	2139	5	full-splice_match	NSD2	ENST00000508355.5	2092	5	-67	20	-37	-20	multi-exon	FALSE	canonical	1	155384	junction_1	160409.12610318497	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	186	1640	100.0	-6	True	NA	NA
PB.7437.1	chr21	+	4732	14	full-splice_match	SIK1B	ENST00000613488.2	4705	14	-26	-1	-26	1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	783	2352	160	2511	35.0	NA	False	AATAAA	-13
PB.6494.3	chr2	+	5584	1	novel_in_catalog	B3GNT2	novel	2763	2	NA	NA	9	-22844	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	7	True	ATTAAA	-28
PB.8662.2	chr4	+	3175	10	novel_in_catalog	NSD2	novel	4251	22	NA	NA	-38	871	combination_of_known_junctions	FALSE	canonical	1	86801	junction_9	189436.50054097248	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	187	2130	45.0	-7	True	NA	NA
PB.9070.1	chr4	-	1115	5	full-splice_match	HMGB2	ENST00000296503.9	1889	5	768	6	34	0	multi-exon	FALSE	canonical	1	3261740	junction_4	600326.563870605	NA	0	NA	TRUE	NA	NA	NA	A	coding	209	630	107	736	10.0	-5	True	AATAAA	-14
PB.11643.3	chr9	-	2693	7	novel_not_in_catalog	AUH	novel	1577	10	NA	NA	-15	5192	any annotated donor/acceptor	FALSE	canonical	1	57343	junction_1	80121.89271232649	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	40	807	15.0	-33	True	NA	NA
PB.292.1	chr1	-	2153	4	full-splice_match	LSM10	ENST00000476041.1	1006	4	-27	-1120	-22	1120	multi-exon	FALSE	canonical	1	6885	junction_2	232452.9837341067	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	173	538	15.0	-9	True	NA	NA
PB.9293.6	chr5	-	2184	3	full-splice_match	ENC1	ENST00000302351.8	5520	3	810	2526	35	-3	multi-exon	FALSE	canonical	1	247421	junction_2	176115.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	322	2091	75.0	814	False	NA	NA
PB.292.2	chr1	-	3971	1	novel_in_catalog	LSM10	novel	850	2	NA	NA	2	94	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	15	True	NA	NA
PB.411.10	chr1	-	2112	11	novel_in_catalog	TUT4	novel	5743	30	NA	NA	-5	-17	no_combination_of_known_junctions	FALSE	canonical	1	4706	junction_8	64553.95830473914	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1857	254	2110	70.0	1	True	NA	NA
PB.2682.1	chr12	+	2070	2	full-splice_match	SPRYD4	ENST00000338146.6	10779	2	-16	8725	-16	-8725	multi-exon	FALSE	canonical	1	185468	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	42	665	30.0	-27	False	ATTAAA	-16
PB.11850.9	chr9	-	5216	15	full-splice_match	FNBP1	ENST00000443566.6	5227	15	-25	36	-25	-36	multi-exon	FALSE	canonical	1	386345	junction_1	245372.41326588337	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	245	1900	35.0	0	True	AATAAA	-39
PB.6021.4	chr19	+	1666	3	novel_not_in_catalog	AC243960.1	novel	661	7	NA	NA	0	11359	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	3931.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	2	True	NA	NA
PB.2682.2	chr12	+	2414	1	novel_in_catalog	SPRYD4	novel	10779	2	NA	NA	1	-8726	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	711	1010	30.0	-10	True	ATTAAA	-15
PB.1137.5	chr1	-	2551	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	1439	-1	any annotated donor/acceptor	FALSE	canonical	1	45	junction_3	88016.87953770888	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	116	1564	10.0	3145	False	TATAAA	-9
PB.514.5	chr1	-	1465	11	full-splice_match	ODF2L	ENST00000488879.6	1422	11	-58	15	-2	-13	multi-exon	FALSE	canonical	1	16281	junction_9	42799.94824482853	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	834	632	1465	75.0	-62	False	AGTAAA	-26
PB.1137.4	chr1	-	2656	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	126	-15	any annotated donor/acceptor	FALSE	canonical	1	3805	junction_3	86249.85281275686	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	294	1742	70.0	1832	False	AAGAAA	-28
PB.212.11	chr1	-	2560	12	novel_not_in_catalog	FGR	novel	2729	13	NA	NA	-9	-3	intron_retention	FALSE	canonical	1	45428	junction_4	149939.79198298504	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	281	1174	35.0	1	True	AGTAAA	-24
PB.212.10	chr1	-	3065	12	novel_in_catalog	FGR	novel	2729	13	NA	NA	-39	-3	intron_retention	FALSE	canonical	1	83516	junction_11	118597.29973345141	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	1469	2446	35.0	9236	False	AGTAAA	-24
PB.212.13	chr1	-	2400	13	novel_not_in_catalog	FGR	novel	2729	13	NA	NA	-23	-3	any annotated donor/acceptor	FALSE	canonical	1	321	junction_1	151810.89379029992	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	210	1781	35.0	-31	True	AGTAAA	-24
PB.212.12	chr1	-	2361	13	full-splice_match	FGR	ENST00000374003.7	2021	13	34	-374	34	-3	multi-exon	FALSE	canonical	1	63336	junction_12	122767.44719307947	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	153	1742	35.0	26	True	AGTAAA	-24
PB.212.14	chr1	-	3128	11	novel_in_catalog	FGR	novel	2729	13	NA	NA	-32	0	intron_retention	FALSE	canonical	1	83516	junction_10	124061.35008410153	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	1816	2514	45.0	9243	False	AGTAAA	-19
PB.212.17	chr1	-	2703	14	novel_not_in_catalog	FGR	novel	2729	13	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	4400	junction_9	172140.2786649314	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	1112	2089	45.0	-1	True	AGTAAA	-19
PB.212.16	chr1	-	3006	11	novel_in_catalog	FGR	novel	2729	13	NA	NA	5	0	intron_retention	FALSE	canonical	1	63336	junction_10	128947.622611237	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	1694	2392	45.0	-3	True	AGTAAA	-19
PB.212.19	chr1	-	2365	11	novel_in_catalog	FGR	novel	2729	13	NA	NA	-3	0	intron_retention	FALSE	canonical	1	5230	junction_8	170900.45383567593	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	1053	1751	45.0	-11	True	AGTAAA	-19
PB.10823.1	chr7	+	2388	1	full-splice_match	AC018635.1	ENST00000468292.1	1030	1	-62	-1296	-62	1296	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.178.9	chr1	+	4233	7	novel_not_in_catalog	CLIC4	novel	4346	6	NA	NA	38	0	intron_retention	FALSE	canonical	1	40	junction_2	683965.2681823878	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	268	903	25.0	0	True	AATAAA	-17
PB.2810.1	chr12	+	1896	1	intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.8918.8	chr4	+	3137	1	novel_in_catalog	AIMP1	novel	568	5	NA	NA	44	-12043	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	CATAAA	-21
PB.7147.1	chr20	+	1052	8	full-splice_match	ITPA	ENST00000380113.7	1185	8	120	13	-9	-13	multi-exon	FALSE	canonical	1	565215	junction_6	68671.8538921121	NA	0	NA	TRUE	NA	NA	NA	A	coding	194	585	73	657	20.0	-21	True	NA	NA
PB.7861.1	chr22	+	1833	1	novel_in_catalog	BX537318.1	novel	1207	2	NA	NA	57	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	184	555	3	557	15.0	2692	False	NA	NA
PB.9755.4	chr6	+	3994	4	novel_in_catalog	CD83	novel	2307	5	NA	NA	131	-246	intron_retention	FALSE	canonical	1	203368	junction_1	40568.47130469671	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	41	487	25.0	0	True	ATTAAA	-11
PB.10328.1	chr6	-	4231	4	novel_in_catalog	MPC1	novel	962	5	NA	NA	-51	-3	intron_retention	FALSE	canonical	1	15616	junction_3	557740.8146354561	NA	1	NA	TRUE	NA	NA	NA	B	coding	98	297	69	365	50.0	-5	True	AATAAA	-18
PB.10328.2	chr6	-	2623	6	novel_not_in_catalog	MPC1	novel	962	5	NA	NA	24	-4	intron_retention	FALSE	canonical	1	5497	junction_4	573857.4605849785	NA	0	NA	TRUE	NA	NA	NA	B	coding	98	297	99	395	50.0	5	True	AATAAA	-17
PB.6731.2	chr2	-	5218	22	full-splice_match	WDR33	ENST00000322313.8	9471	22	-14	4267	10	-4267	multi-exon	FALSE	canonical	1	175855	junction_4	117519.37017182643	NA	0	NA	TRUE	NA	NA	NA	C	coding	1336	4011	174	4184	35.0	9	True	AATAAA	-16
PB.6731.3	chr2	-	4585	22	full-splice_match	WDR33	ENST00000322313.8	9471	22	-40	4926	0	-4926	multi-exon	FALSE	canonical	1	175855	junction_4	117519.37017182643	NA	1	NA	TRUE	NA	NA	NA	C	coding	1336	4011	200	4210	40.0	-17	True	AAAACA	-17
PB.6731.1	chr2	-	5324	22	full-splice_match	WDR33	ENST00000322313.8	9471	22	-6	4153	-6	-4153	multi-exon	FALSE	canonical	1	175855	junction_4	117519.37017182643	NA	3	NA	TRUE	NA	NA	NA	C	coding	1336	4011	166	4176	35.0	17	True	ATTAAA	-18
PB.6731.6	chr2	-	1768	15	incomplete-splice_match	WDR33	ENST00000322313.8	9471	22	-22	20898	2	4732	3prime_fragment	FALSE	canonical	1	179921	junction_5	125786.96541896233	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1587	182	1768	65.0	1	True	NA	NA
PB.6731.7	chr2	-	3149	6	full-splice_match	WDR33	ENST00000409658.7	3104	6	-5	-40	-5	40	multi-exon	FALSE	canonical	1	415281	junction_5	54872.66150643688	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	189	1169	35.0	-6	True	AATAAA	-26
PB.6731.4	chr2	-	4176	21	novel_in_catalog	WDR33	novel	9471	22	NA	NA	0	-4896	no_combination_of_known_junctions	FALSE	canonical	1	11406	junction_4	133412.25812979107	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	200	3601	35.0	-17	True	AATACA	-28
PB.6731.5	chr2	-	3859	18	novel_not_in_catalog	WDR33	novel	9471	22	NA	NA	6	11541	any annotated donor/acceptor	FALSE	canonical	1	1793	junction_1	144817.1516749268	NA	1	NA	TRUE	NA	NA	NA	C	coding	991	2976	194	3169	100.0	-11	True	NA	NA
PB.11850.5	chr9	-	3110	2	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-22	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	132	399	763	1161	10.0	3	True	AATAAA	-21
PB.6731.8	chr2	-	2523	6	full-splice_match	WDR33	ENST00000409658.7	3104	6	0	581	0	-581	multi-exon	FALSE	canonical	1	415281	junction_5	54872.66150643688	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	184	1164	25.0	-1	True	AATAAA	-25
PB.6731.9	chr2	-	1170	6	full-splice_match	WDR33	ENST00000409658.7	3104	6	5	1929	5	-1929	multi-exon	FALSE	canonical	1	415281	junction_5	54872.66150643688	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	179	1159	55.0	4	True	AATAAA	-27
PB.7558.2	chr21	-	1535	4	full-splice_match	SUMO3	ENST00000332859.10	1807	4	34	238	10	-238	multi-exon	FALSE	canonical	1	777701	junction_3	764258.8637959436	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	128	439	10.0	33	False	ATTAAA	-22
PB.7374.1	chr20	-	2322	5	novel_not_in_catalog	CTCFL	novel	2478	12	NA	NA	9931	0	any annotated donor/acceptor	FALSE	canonical	1	24	junction_4	17399.598449030367	NA	0	NA	TRUE	NA	NA	NA	A	coding	216	651	290	940	25.0	NA	False	AATAAA	-21
PB.2501.1	chr12	-	1279	8	full-splice_match	LDHB	ENST00000350669.5	1303	8	24	0	21	0	multi-exon	FALSE	canonical	1	2868318	junction_1	2279356.741073638	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	75	1079	5.0	-19	True	AATAAA	-19
PB.2501.3	chr12	-	2458	7	novel_in_catalog	AC010197.2	novel	3765	23	NA	NA	-41	-78428	intron_retention	FALSE	canonical	1	2868318	junction_1	2435270.3505180557	NA	1	NA	TRUE	NA	NA	NA	B	coding	238	717	96	812	5.0	2	True	AATAAA	-19
PB.2501.2	chr12	-	3112	7	novel_in_catalog	AC010197.2	novel	3765	23	NA	NA	-44	-78428	intron_retention	FALSE	canonical	1	2868318	junction_1	2138855.385501606	NA	1	NA	TRUE	NA	NA	NA	B	coding	160	483	2430	2912	5.0	-1	True	AATAAA	-19
PB.2501.5	chr12	-	4956	1	novel_in_catalog	LDHB	novel	1303	8	NA	NA	1	1472	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	3	True	AAGAAA	-9
PB.2501.4	chr12	-	1887	2	full-splice_match	LDHB	ENST00000544151.1	544	2	129	-1472	0	1472	multi-exon	FALSE	canonical	1	8051353	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	AAGAAA	-9
PB.5664.2	chr19	+	4454	35	full-splice_match	PNPLA6	ENST00000221249.10	4617	35	160	3	11	0	multi-exon	FALSE	canonical	1	25300	junction_1	165354.1583894345	NA	0	NA	TRUE	NA	NA	NA	A	coding	1327	3984	272	4255	15.0	0	True	AATAAA	-13
PB.5664.3	chr19	+	4303	32	novel_not_in_catalog	AC008878.2	novel	942	10	NA	NA	2120	21702	any annotated donor/acceptor	FALSE	canonical	1	390	junction_10	157324.7075211785	NA	7	1	TRUE	NA	NA	NA	B	coding	860	2583	1522	4104	15.0	-4	True	AATAAA	-13
PB.8021.12	chr3	+	4475	19	full-splice_match	XYLB	ENST00000207870.7	3664	19	33	-844	-3	844	multi-exon	FALSE	canonical	1	45785	junction_2	11620.457190305739	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	58	1668	50.0	4	True	NA	NA
PB.8021.13	chr3	+	3507	18	incomplete-splice_match	XYLB	ENST00000207870.7	3664	19	33	12074	-3	-10387	3prime_fragment	FALSE	canonical	1	45785	junction_2	11922.989605007097	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	58	1632	80.0	4	True	NA	NA
PB.8021.10	chr3	+	3192	19	full-splice_match	XYLB	ENST00000207870.7	3664	19	29	443	0	-443	multi-exon	FALSE	canonical	1	45785	junction_2	11620.457190305739	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	62	1672	60.0	0	True	AAAAAG	-44
PB.8021.11	chr3	+	4506	19	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	1	7086	any annotated donor/acceptor	FALSE	canonical	0	0	junction_18	18416.122167583435	NA	8	1	TRUE	NA	NA	NA	C	coding	513	1542	61	1602	20.0	1	True	NA	NA
PB.8021.16	chr3	+	5172	20	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	23	7086	any annotated donor/acceptor	FALSE	canonical	1	389	junction_19	21707.134253033597	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	32	1720	20.0	30	True	NA	NA
PB.8021.14	chr3	+	4488	20	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	3	7086	any annotated donor/acceptor	FALSE	canonical	1	3327	junction_19	21316.449740131346	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	52	1794	20.0	10	True	NA	NA
PB.8021.15	chr3	+	4766	20	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	7	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	17925.129068022445	NA	1	1	TRUE	NA	NA	NA	C	coding	536	1611	48	1658	15.0	14	True	NA	NA
PB.4908.2	chr17	+	4184	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	4	6403	4	892	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	4	NA	TRUE	NA	NA	NA	C	coding	891	2676	145	2820	25.0	-3402	False	AATAAA	-38
PB.4908.3	chr17	+	4429	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	35	6127	0	1168	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	114	2789	80.0	-1	True	NA	NA
PB.5830.1	chr19	+	2508	8	full-splice_match	ARRDC2	ENST00000379656.7	2528	8	14	6	14	-4	multi-exon	TRUE	canonical	1	77835	junction_1	74020.72696680219	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	170	1378	25.0	-8	True	AGTAAA	-10
PB.5830.2	chr19	+	2494	8	full-splice_match	ARRDC2	ENST00000222250.4	2503	8	3	6	1	-4	multi-exon	FALSE	canonical	1	116507	junction_1	63177.14337754548	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	141	1364	25.0	1	True	AGTAAA	-10
PB.10878.4	chr7	+	3575	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	26	-2682	any annotated donor/acceptor	FALSE	canonical	1	13803	junction_2	485368.6665915297	NA	2	NA	TRUE	NA	NA	NA	C	coding	282	849	634	1482	20.0	-7879	False	NA	NA
PB.7352.1	chr20	-	2715	6	full-splice_match	TMEM189	ENST00000371652.8	7714	6	-29	5028	-29	455	multi-exon	FALSE	canonical	1	273341	junction_5	137577.6710885891	NA	4	NA	TRUE	NA	NA	NA	C	coding	270	813	127	939	85.0	-41	False	NA	NA
PB.7352.2	chr20	-	2184	6	full-splice_match	TMEM189	ENST00000371652.8	7714	6	11	5519	11	-3	multi-exon	FALSE	canonical	1	273341	junction_5	137577.6710885891	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	87	899	25.0	-1	True	NA	NA
PB.7352.3	chr20	-	1789	6	full-splice_match	TMEM189	ENST00000371652.8	7714	6	9	5916	9	-126	multi-exon	FALSE	canonical	1	273341	junction_5	137577.6710885891	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	89	901	10.0	-3	True	AATATA	-29
PB.7352.4	chr20	-	1890	7	full-splice_match	TMEM189	ENST00000453505.6	2028	7	11	127	11	-127	multi-exon	TRUE	canonical	1	24011	junction_6	260079.67107194074	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	638	1003	10.0	-1	True	AATATA	-28
PB.10878.1	chr7	+	2888	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-5	-3400	any annotated donor/acceptor	FALSE	canonical	1	13803	junction_2	485368.6665915297	NA	2	NA	TRUE	NA	NA	NA	C	coding	282	849	665	1513	85.0	-7910	False	NA	NA
PB.10878.2	chr7	+	2517	12	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	14	-36	any annotated donor/acceptor	FALSE	canonical	1	3206	junction_2	525459.4181680172	NA	12	2	TRUE	NA	NA	NA	C	coding	373	1122	621	1742	80.0	-7891	False	TATAAA	-18
PB.10878.3	chr7	+	3922	10	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	90	6	intron_retention	FALSE	canonical	1	8970	junction_1	392146.55841882434	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	2081	3100	35.0	0	True	NA	NA
PB.1188.1	chr1	-	3074	5	full-splice_match	TAF5L	ENST00000258281.6	3112	5	38	0	29	0	multi-exon	FALSE	canonical	1	69194	junction_4	54973.566570671035	NA	2	NA	TRUE	NA	NA	NA	C	coding	589	1770	129	1898	55.0	46	False	ATTAAA	-15
PB.8853.76	chr4	-	2990	23	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-1	-60	combination_of_known_junctions	FALSE	canonical	1	83080	junction_10	317263.9356432642	NA	2	NA	TRUE	NA	NA	NA	C	coding	962	2886	103	2988	70.0	-44	True	NA	NA
PB.1188.2	chr1	-	4070	4	novel_not_in_catalog	TAF5L	novel	2956	4	NA	NA	277	-2	any annotated donor/acceptor	FALSE	canonical	1	15871	junction_3	77795.78490866684	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	100	1077	10.0	362	False	AATAAA	-14
PB.10878.8	chr7	+	2753	11	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-24	0	any annotated donor/acceptor	FALSE	canonical	1	13803	junction_2	474558.62498967396	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	622	1641	45.0	-72	True	AATAAA	-17
PB.10878.9	chr7	+	2754	13	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-23	-38	any annotated donor/acceptor	FALSE	canonical	1	9439	junction_2	547514.4256463324	NA	15	2	TRUE	NA	NA	NA	C	coding	391	1176	806	1981	70.0	-71	True	TATAAA	-16
PB.11098.1	chr8	+	5081	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	1	21990	junction_1	171463.2157189626	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	83	2329	100.0	0	True	NA	NA
PB.1348.7	chr10	+	1962	3	full-splice_match	SVIL-AS1	ENST00000623175.3	401	3	-40	-1521	0	-103	multi-exon	FALSE	canonical	1	143672	junction_1	7759.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	1391	1894	20.0	0	True	AATAAA	-20
PB.1348.6	chr10	+	2038	3	novel_not_in_catalog	SVIL-AS1	novel	440	3	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	9471	junction_2	72611.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.1348.5	chr10	+	2066	3	full-splice_match	SVIL-AS1	ENST00000623175.3	401	3	-42	-1623	-2	-1	multi-exon	FALSE	canonical	1	143672	junction_1	7759.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	1393	1896	15.0	-2	True	AGTAAA	-19
PB.1348.4	chr10	+	1946	3	full-splice_match	SVIL-AS1	ENST00000427063.6	2025	3	-25	104	8	-104	multi-exon	FALSE	canonical	1	154693	junction_1	2248.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	1376	1879	20.0	-10	True	AATAAA	-19
PB.1348.3	chr10	+	2050	3	full-splice_match	SVIL-AS1	ENST00000427063.6	2025	3	-25	0	8	0	multi-exon	FALSE	canonical	1	154693	junction_1	2248.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	1376	1879	15.0	-10	True	AGTAAA	-20
PB.1348.2	chr10	+	5005	8	novel_not_in_catalog	SVIL-AS1	novel	440	3	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	837	junction_4	52893.973307023196	NA	5	NA	TRUE	NA	NA	NA	C	coding	214	645	2195	2839	30.0	-22	True	NA	NA
PB.1348.1	chr10	+	3080	3	full-splice_match	SVIL-AS1	ENST00000438202.5	652	3	-68	-2360	-5	2360	multi-exon	FALSE	canonical	1	23400	junction_2	60136.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-23	True	NA	NA
PB.10083.5	chr6	-	4210	12	novel_in_catalog	PGM3	novel	605	4	NA	NA	0	-458	no_combination_of_known_junctions	FALSE	canonical	1	13462	junction_2	109408.48103905258	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	59	1564	30.0	22	True	NA	NA
PB.9544.5	chr5	+	2709	17	incomplete-splice_match	RBM27	ENST00000265271.6	6451	21	2	19694	2	5919	3prime_fragment	FALSE	canonical	1	160170	junction_8	64102.45555843468	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2544	165	2708	80.0	-3	True	NA	NA
PB.9544.4	chr5	+	6070	20	novel_in_catalog	AC091959.3	novel	3311	20	NA	NA	22	-50363	no_combination_of_known_junctions	FALSE	canonical	1	62222	junction_8	70411.04261619173	NA	4	NA	TRUE	NA	NA	NA	B	coding	1005	3018	195	3212	70.0	3	True	NA	NA
PB.10083.8	chr6	-	2437	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	19	3651	-8	4	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	99	1727	60.0	-18	True	NA	NA
PB.3352.3	chr14	-	2022	17	novel_in_catalog	RABGGTA	novel	735	3	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	5518	junction_16	96693.61967864577	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	244	1947	15.0	-2	True	AATAAA	-27
PB.9544.1	chr5	+	3727	21	full-splice_match	RBM27	ENST00000265271.6	6451	21	1	2723	1	-2723	multi-exon	FALSE	canonical	1	160170	junction_8	59428.47946271215	NA	1	NA	TRUE	NA	NA	NA	C	coding	1060	3183	166	3348	25.0	-4	True	ATTAAA	-17
PB.9544.3	chr5	+	6480	21	full-splice_match	RBM27	ENST00000265271.6	6451	21	-29	0	-29	0	multi-exon	FALSE	canonical	1	160170	junction_8	59428.47946271215	NA	1	NA	TRUE	NA	NA	NA	C	coding	1060	3183	196	3378	85.0	2	True	AATAAA	-29
PB.1348.8	chr10	+	2415	3	full-splice_match	SVIL-AS1	ENST00000430295.5	440	3	156	-2131	0	1744	multi-exon	FALSE	canonical	1	23400	junction_2	65646.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	NA	NA
PB.6947.3	chr2	-	3976	12	novel_not_in_catalog	TMEM237	novel	5592	13	NA	NA	-9	-1414	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	117912.25721332153	NA	1	1	TRUE	NA	NA	NA	B	coding	203	612	710	1321	20.0	-9	True	NA	NA
PB.6947.2	chr2	-	5398	12	novel_not_in_catalog	TMEM237	novel	5592	13	NA	NA	14	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	117912.25721332153	NA	1	1	TRUE	NA	NA	NA	B	coding	203	612	720	1331	0.0	-19	True	AATAAA	-16
PB.6947.1	chr2	-	5315	12	novel_not_in_catalog	TMEM237	novel	5592	13	NA	NA	-15	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	109770.64633698604	NA	2	1	TRUE	NA	NA	NA	B	coding	203	612	635	1246	5.0	1	True	AATAAA	-18
PB.10192.1	chr6	-	5227	33	full-splice_match	TBC1D32	ENST00000275159.10	4431	33	-56	-740	-6	-3	multi-exon	TRUE	non_canonical	0	0	junction_4	8939.970580241634	NA	1	NA	TRUE	NA	NA	NA	C	coding	1298	3897	57	3953	10.0	-7	True	ATTAAA	-14
PB.6947.6	chr2	-	1782	12	novel_not_in_catalog	TMEM237	novel	5592	13	NA	NA	14	-48	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	117912.25721332153	NA	1	1	TRUE	NA	NA	NA	B	coding	203	612	720	1331	30.0	-19	True	AATAAA	-26
PB.6947.5	chr2	-	1700	12	novel_not_in_catalog	TMEM237	novel	5592	13	NA	NA	-17	-47	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	109770.64633698604	NA	1	1	TRUE	NA	NA	NA	B	coding	203	612	637	1248	30.0	-1	True	AATAAA	-27
PB.10192.2	chr6	-	4490	33	full-splice_match	TBC1D32	ENST00000275159.10	4431	33	-59	0	-9	0	multi-exon	FALSE	non_canonical	0	0	junction_4	8939.970580241634	NA	18	3	TRUE	NA	NA	NA	C	coding	1298	3897	60	3956	100.0	-10	True	NA	NA
PB.4908.8	chr17	+	5275	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	4	5312	4	1983	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	145	2820	70.0	-3402	False	NA	NA
PB.3350.6	chr14	+	3326	10	novel_in_catalog	GMPR2	novel	1910	11	NA	NA	0	-1	intron_retention	TRUE	canonical	1	31806	junction_3	288520.88232839503	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	2282	2866	25.0	-21	True	AATAAA	-19
PB.3350.7	chr14	+	1635	10	full-splice_match	GMPR2	ENST00000399440.6	1652	10	14	3	-7	0	multi-exon	FALSE	canonical	1	192537	junction_1	210346.8095236185	NA	1	NA	TRUE	NA	NA	NA	C	coding	348	1047	128	1174	25.0	-9888	False	AATAAA	-20
PB.3350.4	chr14	+	2581	8	incomplete-splice_match	GMPR2	ENST00000559836.5	1893	10	175	3	-18	0	intron_retention	FALSE	canonical	1	183154	junction_1	221123.17137592554	NA	2	1	TRUE	NA	NA	NA	C	coding	241	726	208	933	25.0	-39	True	AATAAA	-20
PB.4417.4	chr16	+	3123	5	novel_in_catalog	CNEP1R1	novel	2965	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	49043	junction_4	21027.346509961735	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	27	True	AATAAA	-18
PB.3350.2	chr14	+	1707	10	full-splice_match	GMPR2	ENST00000559836.5	1893	10	183	3	-10	0	multi-exon	FALSE	canonical	1	183154	junction_1	212682.8187408554	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	200	1246	25.0	-31	True	AATAAA	-20
PB.3350.3	chr14	+	2070	9	incomplete-splice_match	GMPR2	ENST00000559836.5	1893	10	3	3	3	0	intron_retention	FALSE	canonical	1	183154	junction_1	218214.8128078156	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	380	1609	25.0	-18	True	AATAAA	-20
PB.3350.1	chr14	+	1768	10	full-splice_match	GMPR2	ENST00000355299.8	1972	10	200	4	-13	-1	multi-exon	FALSE	canonical	1	97840	junction_1	234557.08525076223	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	262	1308	25.0	-34	True	AATAAA	-19
PB.2515.2	chr12	-	2502	17	novel_not_in_catalog	INTS13	novel	1378	8	NA	NA	0	4	any annotated donor/acceptor	FALSE	canonical	1	3225	junction_5	125507.89626951765	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	189	1670	40.0	7	True	AATAAA	-31
PB.2517.4	chr12	-	2761	12	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	1	11171	junction_10	246518.39146430587	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	184	1986	75.0	32	True	NA	NA
PB.8811.3	chr4	+	2623	18	full-splice_match	RUFY3	ENST00000381006.7	3098	18	30	445	14	-1	multi-exon	FALSE	canonical	1	69833	junction_12	75517.28498680647	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	550	2412	20.0	-657	False	AATAAA	-15
PB.2515.1	chr12	-	2787	17	full-splice_match	INTS13	ENST00000261191.11	2974	17	316	-129	-33	129	multi-exon	FALSE	canonical	1	234503	junction_16	88509.7959619972	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	222	2342	20.0	-26	True	TATAAA	-20
PB.2515.6	chr12	-	2655	16	novel_in_catalog	INTS13	novel	1378	8	NA	NA	-125	-1	combination_of_known_junctions	FALSE	canonical	1	6697	junction_8	125974.18867963918	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	314	2344	45.0	208	False	AATAAA	-22
PB.2515.4	chr12	-	2459	16	novel_in_catalog	INTS13	novel	1378	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	33439	junction_5	124317.0733145425	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	198	2147	45.0	-2	True	AATAAA	-23
PB.2515.5	chr12	-	2650	17	novel_not_in_catalog	INTS13	novel	1378	8	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	16158	junction_8	120469.96580988298	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	200	2338	45.0	-4	True	AATAAA	-23
PB.212.1	chr1	-	3863	13	novel_not_in_catalog	FGR	novel	2729	13	NA	NA	-11	691	intron_retention	FALSE	canonical	1	7247	junction_1	152956.3187677195	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	1441	2418	25.0	-1	True	NA	NA
PB.1223.7	chr1	-	3127	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	27	-1405	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	6	1	TRUE	NA	NA	NA	B	coding	244	735	176	910	15.0	-1	True	TATAAA	-19
PB.212.3	chr1	-	2340	13	full-splice_match	FGR	ENST00000399173.5	2483	13	140	3	35	-3	multi-exon	FALSE	canonical	1	83516	junction_12	118680.96686904864	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	132	1721	35.0	-19	True	AGTAAA	-24
PB.212.2	chr1	-	2634	13	full-splice_match	FGR	ENST00000374003.7	2021	13	-9	-604	-9	-1	multi-exon	FALSE	canonical	1	63336	junction_12	122767.44719307947	NA	3	NA	TRUE	NA	NA	NA	C	coding	529	1590	196	1785	20.0	-17	True	ATTAAA	-19
PB.4417.1	chr16	+	2320	8	novel_not_in_catalog	CNEP1R1	novel	2965	7	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	35881.662395224914	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	2	True	AATAAA	-12
PB.212.7	chr1	-	2952	12	novel_in_catalog	FGR	novel	2729	13	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	63336	junction_11	123205.53857197297	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	1354	2331	30.0	-17	True	AGTAAA	-26
PB.212.6	chr1	-	2323	12	novel_in_catalog	FGR	novel	2729	13	NA	NA	-28	0	no_combination_of_known_junctions	FALSE	canonical	1	5230	junction_9	162968.84646367992	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	724	1701	30.0	-36	True	AGTAAA	-27
PB.212.8	chr1	-	2464	11	novel_not_in_catalog	FGR	novel	2729	13	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	5230	junction_8	183479.309004476	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	1337	1843	30.0	-4	True	AGTAAA	-26
PB.9632.16	chr5	-	2189	4	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	15805	junction_3	199183.64589047522	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	358	654	20.0	-33	True	AATAAA	-19
PB.1557.28	chr10	+	5531	10	full-splice_match	ENTPD1	ENST00000371205.4	2035	10	206	-3702	1	609	multi-exon	FALSE	canonical	1	202323	junction_7	60927.94955995357	NA	2	NA	TRUE	NA	NA	NA	C	coding	510	1533	78	1610	10.0	0	True	AATAAA	-17
PB.1557.29	chr10	+	2450	7	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	1157	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	128697.8320503971	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	78	923	20.0	0	True	AATAAA	-13
PB.1557.24	chr10	+	3248	11	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	1157	any annotated donor/acceptor	FALSE	canonical	1	2134	junction_8	133588.38090885748	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	78	1373	20.0	0	True	AATAAA	-13
PB.1557.25	chr10	+	3009	9	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	1157	combination_of_known_junctions	FALSE	canonical	1	14385	junction_1	114811.95882010451	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	274	1482	20.0	0	True	AATAAA	-13
PB.1557.26	chr10	+	2986	9	full-splice_match	ENTPD1	ENST00000639992.1	1830	9	1	-1157	1	1157	multi-exon	FALSE	canonical	1	16465	junction_3	111599.00971866865	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	341	1459	20.0	0	True	AATAAA	-13
PB.1557.27	chr10	+	2903	9	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	1163	no_combination_of_known_junctions	FALSE	canonical	1	4491	junction_5	108531.89486016311	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	78	1370	15.0	0	True	AATAAA	-19
PB.1557.20	chr10	+	3022	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	1164	any annotated donor/acceptor	FALSE	canonical	1	13363	junction_6	102780.5465839658	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	79	1488	15.0	-1	True	AATAAA	-20
PB.1557.21	chr10	+	2770	8	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	1157	no_combination_of_known_junctions	TRUE	canonical	1	4491	junction_4	141482.89463668573	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	275	1243	20.0	-1	True	AATAAA	-13
PB.1557.22	chr10	+	4489	9	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	-1154	intron_retention	FALSE	canonical	1	202323	junction_6	63929.310503379435	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	1717	2331	25.0	0	True	AATAAA	-19
PB.1557.23	chr10	+	3657	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	-1154	any annotated donor/acceptor	FALSE	canonical	1	13305	junction_5	109624.88640116868	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	78	1499	25.0	0	True	AATAAA	-19
PB.3641.1	chr14	-	1595	5	full-splice_match	SERPINA1	ENST00000393087.8	1622	5	3	24	3	0	multi-exon	FALSE	canonical	1	5139322	junction_4	2895181.186548553	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	263	1519	10.0	5926	False	ATTAAA	-16
PB.12356.5	chrX	+	1811	9	novel_in_catalog	IKBKG	novel	960	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	112	junction_4	127247.82492517309	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	157	1227	15.0	21	True	NA	NA
PB.3641.2	chr14	-	1576	5	full-splice_match	SERPINA1	ENST00000440909.5	3144	5	-58	1626	-2	0	multi-exon	FALSE	canonical	1	316294	junction_4	4721783.903909219	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	244	1500	10.0	4048	False	ATTAAA	-16
PB.6539.2	chr2	+	3472	3	novel_not_in_catalog	VAX2	novel	1147	3	NA	NA	5	-3760	any annotated donor/acceptor	FALSE	canonical	1	811	junction_2	8347.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	147	444	28	471	75.0	-14	True	NA	NA
PB.12356.4	chrX	+	3008	9	novel_in_catalog	IKBKG	novel	960	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	1337	junction_5	127143.01732393476	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	176	985	15.0	2	True	NA	NA
PB.5101.1	chr17	+	4423	26	full-splice_match	ITGA3	ENST00000320031.12	4888	26	468	-3	91	2	multi-exon	FALSE	canonical	1	354094	junction_1	195564.9574761859	NA	5	NA	TRUE	NA	NA	NA	C	coding	946	2841	178	3018	15.0	-7523	False	AATAAA	-19
PB.5101.2	chr17	+	4739	27	novel_not_in_catalog	ITGA3	novel	1817	14	NA	NA	12	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	255283.79662815097	NA	3	1	TRUE	NA	NA	NA	C	coding	1030	3093	241	3333	15.0	-8021	False	AATAAA	-20
PB.5101.3	chr17	+	4851	26	novel_not_in_catalog	ITGA3	novel	1817	14	NA	NA	-16	2	any annotated donor/acceptor	FALSE	canonical	1	60	junction_6	253337.81293552215	NA	3	2	TRUE	NA	NA	NA	C	coding	614	1845	1602	3446	15.0	-8007	False	AATAAA	-19
PB.5101.4	chr17	+	4487	24	novel_in_catalog	ITGA3	novel	1817	14	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	18989	junction_5	259888.40628404	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2751	331	3081	15.0	-1	True	AATAAA	-20
PB.5101.5	chr17	+	4642	27	novel_not_in_catalog	ITGA3	novel	1817	14	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	255283.79662815097	NA	2	NA	TRUE	NA	NA	NA	C	coding	1030	3093	147	3239	15.0	1	True	AATAAA	-17
PB.5101.6	chr17	+	4692	26	novel_not_in_catalog	ITGA3	novel	1817	14	NA	NA	339	-1	any annotated donor/acceptor	FALSE	canonical	1	996	junction_1	240380.794792376	NA	6	1	TRUE	NA	NA	NA	C	coding	946	2841	451	3291	15.0	-7275	False	AATAAA	-15
PB.11122.11	chr8	+	3128	19	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	7841	junction_6	83115.31718525506	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	853	2667	30.0	1	True	AATAAA	-11
PB.12356.6	chrX	+	3040	9	novel_not_in_catalog	IKBKG	novel	960	6	NA	NA	3	-2	intron_retention	FALSE	canonical	1	11	junction_4	127261.19900400711	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	1969	2457	10.0	-17	False	NA	NA
PB.8662.11	chr4	+	3268	10	novel_in_catalog	NSD2	novel	4251	22	NA	NA	-28	974	combination_of_known_junctions	FALSE	canonical	1	86801	junction_9	189436.50054097248	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	177	2120	5.0	3	True	AATAAA	-22
PB.6957.1	chr2	+	3886	16	full-splice_match	CARF	ENST00000402905.7	5938	16	45	2007	4	867	multi-exon	FALSE	canonical	1	28532	junction_1	11624.277950335954	NA	1	NA	TRUE	NA	NA	NA	A	coding	725	2178	277	2454	75.0	-16	False	NA	NA
PB.1040.4	chr1	-	6371	27	novel_in_catalog	KDM5B	novel	10341	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	21675	junction_1	121241.36729400986	NA	0	NA	TRUE	NA	NA	NA	C	coding	1513	4542	176	4717	15.0	0	True	ATTAAA	-15
PB.8662.10	chr4	+	2255	10	novel_in_catalog	NSD2	novel	4251	22	NA	NA	-30	-41	combination_of_known_junctions	FALSE	canonical	1	86801	junction_9	189436.50054097248	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	179	2122	65.0	1	True	AATAAA	-12
PB.9393.3	chr5	+	8907	11	full-splice_match	DCP2	ENST00000389063.2	8947	11	39	1	-19	-1	multi-exon	FALSE	canonical	1	145061	junction_1	66647.01219477135	NA	2	NA	TRUE	NA	NA	NA	C	coding	420	1263	160	1422	10.0	-26	True	AATAAA	-34
PB.6173.2	chr19	-	2596	6	novel_not_in_catalog	ZNF350	novel	2338	5	NA	NA	-13	-4	any annotated donor/acceptor	TRUE	canonical	1	3084	junction_5	48843.20057899564	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	491	2089	30.0	-12	True	ATTAAA	-11
PB.9445.9	chr5	-	4742	21	full-splice_match	AFF4	ENST00000265343.9	9552	21	0	4810	0	-4810	multi-exon	FALSE	canonical	1	229244	junction_20	56859.44758918697	NA	0	NA	TRUE	NA	NA	NA	C	coding	1163	3492	381	3872	35.0	-1	True	ATTAAA	-24
PB.12356.3	chrX	+	4764	8	novel_in_catalog	IKBKG	novel	960	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	1337	junction_4	132663.98520737284	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	3692	4180	15.0	2	True	NA	NA
PB.9445.7	chr5	-	9413	20	novel_in_catalog	AFF4	novel	9552	21	NA	NA	13	-23	combination_of_known_junctions	FALSE	canonical	1	18860	junction_16	89153.35748726504	NA	4	NA	TRUE	NA	NA	NA	C	coding	1134	3405	352	3756	40.0	-1	True	AATAAA	-19
PB.12356.2	chrX	+	2249	10	novel_not_in_catalog	IKBKG	novel	960	6	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	canonical	1	56	junction_4	122166.93274641328	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	1015	1665	15.0	1	True	NA	NA
PB.9445.1	chr5	-	9244	21	full-splice_match	AFF4	ENST00000265343.9	9552	21	295	13	174	-13	multi-exon	FALSE	canonical	1	229244	junction_20	56859.44758918697	NA	1	NA	TRUE	NA	NA	NA	C	coding	1163	3492	86	3577	30.0	548	False	AATAAA	-29
PB.9213.1	chr5	-	2520	13	full-splice_match	C5orf34	ENST00000306862.6	2507	13	-14	1	-14	-1	multi-exon	TRUE	canonical	1	903	junction_12	26387.499564055997	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	391	2307	25.0	-12	True	AATAAA	-22
PB.2581.1	chr12	-	1647	5	full-splice_match	RND1	ENST00000309739.5	1681	5	28	6	0	-4	multi-exon	FALSE	canonical	1	128699	junction_1	30286.935478643263	NA	0	NA	TRUE	NA	NA	NA	A	coding	232	699	104	802	30.0	-1	True	AATATA	-9
PB.11190.4	chr8	+	3483	6	full-splice_match	GDAP1	ENST00000522568.1	1324	6	-32	-2127	-6	-8	multi-exon	FALSE	canonical	1	25440	junction_2	53298.24145316616	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	233	982	45.0	-34	True	AATAAA	-28
PB.145.38	chr1	-	2580	10	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	-6	3115	any annotated donor/acceptor	FALSE	canonical	1	20726	junction_1	443288.55476200563	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	246	1280	15.0	-7	True	NA	NA
PB.145.39	chr1	-	2340	9	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	16	3114	any annotated donor/acceptor	FALSE	canonical	1	20726	junction_1	441381.3204165844	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	121	1041	15.0	10	True	NA	NA
PB.10152.10	chr6	-	2550	7	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17271	-13262	any annotated donor/acceptor	FALSE	canonical	1	12899	junction_6	36747.53181016228	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	214	2307	35.0	-23	True	NA	NA
PB.528.1	chr1	+	3224	7	novel_in_catalog	LRRC8B	novel	763	6	NA	NA	6	-4471	intron_retention	FALSE	canonical	1	8204	junction_1	24799.02736948008	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	479	2890	80.0	-14	True	NA	NA
PB.11198.1	chr8	+	3186	9	full-splice_match	ZC2HC1A	ENST00000263849.8	3352	9	15	151	15	-151	multi-exon	FALSE	canonical	1	115034	junction_1	14684.81561852242	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	88	1065	40.0	-27	True	AATAAA	-24
PB.3655.2	chr14	+	2068	3	full-splice_match	GSKIP	ENST00000438650.5	2140	3	72	0	-2	0	multi-exon	FALSE	canonical	1	3414	junction_1	169822.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	47	466	20.0	-2	True	GATAAA	-12
PB.3655.3	chr14	+	2712	4	full-splice_match	GSKIP	ENST00000555181.5	2218	4	51	-545	2	545	multi-exon	FALSE	canonical	1	143451	junction_1	81508.18972757687	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	144	563	85.0	2	True	TATAAA	-37
PB.3655.1	chr14	+	2165	4	full-splice_match	GSKIP	ENST00000555181.5	2218	4	51	2	2	0	multi-exon	FALSE	canonical	1	143451	junction_1	81508.18972757687	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	144	563	20.0	2	True	GATAAA	-12
PB.10482.9	chr7	-	2330	9	full-splice_match	HERPUD2	ENST00000311350.7	2474	9	-36	180	-36	-180	multi-exon	FALSE	canonical	1	48436	junction_8	92587.04605363269	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	669	1889	70.0	2	True	NA	NA
PB.9712.3	chr6	+	1694	7	novel_not_in_catalog	FARS2	novel	1692	7	NA	NA	6	-77795	any annotated donor/acceptor	FALSE	canonical	1	824	junction_6	74751.36715007664	NA	2	NA	TRUE	NA	NA	NA	C	coding	416	1251	151	1401	5.0	6	True	NA	NA
PB.322.10	chr1	+	3069	11	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	8	-5	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_3	220774.76796862454	NA	3	NA	TRUE	NA	NA	NA	C	coding	312	939	621	1559	15.0	11	True	ATTAAA	-19
PB.8918.3	chr4	+	5968	7	novel_not_in_catalog	AIMP1	novel	568	5	NA	NA	16	-724	any annotated donor/acceptor	FALSE	canonical	1	21663	junction_1	299832.36633084755	NA	4	NA	TRUE	NA	NA	NA	C	coding	312	939	4955	5893	35.0	6	True	AATAAA	-27
PB.145.33	chr1	-	3289	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	7	-246	combination_of_known_junctions	FALSE	canonical	1	222513	junction_12	333508.870958761	NA	3	NA	TRUE	NA	NA	NA	C	coding	553	1662	212	1873	30.0	1	True	NA	NA
PB.322.12	chr1	+	2170	4	incomplete-splice_match	ZMPSTE24	ENST00000372759.3	3108	10	23234	6	-9304	-6	5prime_fragment	FALSE	canonical	1	479502	junction_2	38001.55119933337	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	131	661	15.0	NA	False	ATTAAA	-18
PB.362.3	chr1	+	1567	11	full-splice_match	DMAP1	ENST00000315913.9	1552	11	-24	9	5	-9	multi-exon	FALSE	canonical	1	172944	junction_1	125190.12375059785	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	110	1513	10.0	-7	True	AATAGA	-14
PB.1089.1	chr1	+	3076	10	incomplete-splice_match	CR1	ENST00000434033.5	2377	11	-91	0	7	0	intron_retention	FALSE	canonical	1	997	junction_7	26555.250052171104	NA	6	NA	TRUE	NA	NA	NA	A	coding	552	1659	19	1677	25.0	1	True	NA	NA
PB.362.2	chr1	+	5040	10	novel_in_catalog	DMAP1	novel	1545	11	NA	NA	-3	-6	intron_retention	FALSE	canonical	1	19850	junction_1	160770.02074606868	NA	3	NA	TRUE	NA	NA	NA	C	coding	141	426	4558	4983	5.0	-19	True	AATAGA	-17
PB.11198.2	chr8	+	3448	10	novel_in_catalog	ZC2HC1A	novel	3352	9	NA	NA	16	-5	intron_retention	FALSE	canonical	1	14164	junction_8	53166.08863380194	NA	2	NA	TRUE	NA	NA	NA	C	coding	364	1095	87	1181	35.0	-26	True	AATAAA	-13
PB.2128.2	chr11	+	3082	2	novel_not_in_catalog	TPCN2	novel	4622	15	NA	NA	82953	-1	any annotated donor/acceptor	FALSE	canonical	1	86	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	1018	1377	10.0	-69	False	NA	NA
PB.2128.3	chr11	+	3240	2	full-splice_match	AP003071.5	ENST00000641280.1	500	2	-41	-2699	-41	2687	multi-exon	FALSE	canonical	1	969	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	119	360	1176	1535	10.0	-68	False	NA	NA
PB.12369.5	chrX	-	1526	8	full-splice_match	TMLHE	ENST00000334398.7	2832	8	-29	1335	-29	-1	multi-exon	FALSE	canonical	1	1025	junction_1	55778.44078355811	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	176	1441	20.0	-14	True	NA	NA
PB.2128.1	chr11	+	2844	3	novel_in_catalog	TPCN2	novel	4622	15	NA	NA	82940	-2589	no_combination_of_known_junctions	FALSE	canonical	1	4594	junction_1	2502.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	697	1089	30.0	-82	False	TTTAAA	-21
PB.12369.3	chrX	-	2849	8	full-splice_match	TMLHE	ENST00000334398.7	2832	8	-12	-5	-12	5	multi-exon	FALSE	canonical	1	1025	junction_1	55778.44078355811	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	159	1424	10.0	3	True	NA	NA
PB.12369.2	chrX	-	3937	8	full-splice_match	TMLHE	ENST00000334398.7	2832	8	11	-1116	11	1116	multi-exon	FALSE	canonical	1	1025	junction_1	55778.44078355811	NA	2	NA	TRUE	NA	NA	NA	C	coding	421	1266	136	1401	25.0	-19	True	NA	NA
PB.12369.1	chrX	-	4855	8	full-splice_match	TMLHE	ENST00000334398.7	2832	8	-7	-2016	-7	2016	multi-exon	FALSE	canonical	1	1025	junction_1	55778.44078355811	NA	7	NA	TRUE	NA	NA	NA	C	coding	421	1266	154	1419	30.0	8	True	NA	NA
PB.2128.5	chr11	+	2860	2	novel_in_catalog	TPCN2	novel	4622	15	NA	NA	82995	-2612	intron_retention	FALSE	canonical	1	4594	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	642	1034	45.0	0	True	NA	NA
PB.10482.3	chr7	-	2997	7	novel_in_catalog	HERPUD2	novel	3057	8	NA	NA	-21	-3	intron_retention	FALSE	canonical	1	4725	junction_6	118368.70136803713	NA	4	1	TRUE	NA	NA	NA	C	coding	380	1143	827	1969	35.0	30	False	AATAAA	-15
PB.8918.2	chr4	+	1113	7	full-splice_match	AIMP1	ENST00000394701.4	2586	7	13	1460	13	-725	multi-exon	FALSE	canonical	1	529597	junction_1	140124.30655631766	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	29	1039	35.0	3	True	AATAAA	-26
PB.145.34	chr1	-	1947	13	full-splice_match	HP1BP3	ENST00000312239.9	3938	13	16	1975	-6	956	multi-exon	FALSE	canonical	1	42551	junction_12	372445.7783703686	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	125	1786	10.0	-21	True	AATAAA	-21
PB.10482.2	chr7	-	2676	9	full-splice_match	HERPUD2	ENST00000311350.7	2474	9	205	-407	93	-3	multi-exon	FALSE	canonical	1	48436	junction_8	92587.04605363269	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	428	1648	35.0	-9	True	AATAAA	-15
PB.10242.12	chr6	-	2778	20	full-splice_match	REPS1	ENST00000258062.9	3161	20	317	66	57	-44	multi-exon	FALSE	canonical	1	73687	junction_8	125958.37474520814	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	263	2650	25.0	33	True	ATTAAA	-25
PB.22.3	chr1	+	2560	17	novel_in_catalog	ATAD3A	novel	2492	16	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	4961	junction_13	187373.00942638455	NA	3	NA	TRUE	NA	NA	NA	C	coding	612	1839	109	1947	0.0	-1	True	AATAAA	-18
PB.8026.2	chr3	-	3734	9	full-splice_match	GORASP1	ENST00000319283.7	3722	9	-21	9	-21	0	multi-exon	FALSE	canonical	1	129017	junction_8	60212.82114716101	NA	7	1	TRUE	NA	NA	NA	C	coding	440	1323	844	2166	45.0	-758	False	AATAAA	-17
PB.1215.4	chr1	+	1458	4	full-splice_match	GGPS1	ENST00000282841.9	2895	4	0	1437	0	2	multi-exon	FALSE	canonical	1	337000	junction_1	71373.18919750064	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	233	1135	30.0	0	True	AATAAA	-18
PB.1215.5	chr1	+	2890	4	full-splice_match	GGPS1	ENST00000282841.9	2895	4	0	5	0	2	multi-exon	FALSE	canonical	1	337000	junction_1	71373.18919750064	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	233	1135	45.0	0	True	ATTAAA	-19
PB.1215.6	chr1	+	2473	1	novel_in_catalog	GGPS1	novel	1396	4	NA	NA	-75	1442	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1510	False	AATAAA	-16
PB.22.2	chr1	+	2492	16	full-splice_match	ATAD3A	ENST00000378756.7	2492	16	3	-3	3	1	multi-exon	FALSE	canonical	1	10885	junction_4	187905.54848973107	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	116	1876	0.0	-8	True	AATAAA	-21
PB.1215.1	chr1	+	2447	3	full-splice_match	GGPS1	ENST00000391855.2	1407	3	-27	-1013	-26	-374	multi-exon	FALSE	canonical	1	22604	junction_1	234671.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	328	1068	95.0	-1920	False	NA	NA
PB.1215.2	chr1	+	2784	4	novel_in_catalog	GGPS1	novel	1396	4	NA	NA	-63	2	intron_retention	FALSE	canonical	1	27275	junction_1	217336.55463512498	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	1559	2461	30.0	-1498	False	AATAAA	-18
PB.1215.3	chr1	+	2515	4	full-splice_match	GGPS1	ENST00000282841.9	2895	4	-1	381	-1	-374	multi-exon	FALSE	canonical	1	337000	junction_1	71373.18919750064	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	234	1136	95.0	-1	True	NA	NA
PB.10482.7	chr7	-	2479	9	full-splice_match	HERPUD2	ENST00000311350.7	2474	9	-19	14	-19	-14	multi-exon	FALSE	canonical	1	48436	junction_8	92587.04605363269	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	652	1872	75.0	32	False	NA	NA
PB.1215.8	chr1	+	2795	3	full-splice_match	GGPS1	ENST00000391855.2	1407	3	1	-1389	1	2	multi-exon	FALSE	canonical	1	22604	junction_1	234671.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	300	1040	45.0	2	True	ATTAAA	-19
PB.1215.9	chr1	+	2673	4	novel_in_catalog	GGPS1	novel	1396	4	NA	NA	-103	-149	intron_retention	FALSE	canonical	1	27275	junction_1	217336.55463512498	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	1599	2501	60.0	-1538	False	NA	NA
PB.2206.9	chr11	-	3340	17	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-5	12	combination_of_known_junctions	FALSE	canonical	1	41386	junction_1	389586.6271238457	NA	2	NA	TRUE	NA	NA	NA	C	coding	547	1644	323	1966	20.0	-28	True	AATAAA	-30
PB.2206.8	chr11	-	3531	20	full-splice_match	PICALM	ENST00000393346.7	2340	20	-66	-1125	-11	-1	multi-exon	FALSE	canonical	1	360823	junction_3	392759.0630994093	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	216	2174	30.0	-17	True	AATAAA	-13
PB.6444.6	chr2	+	3293	6	novel_not_in_catalog	PPM1B	novel	2084	6	NA	NA	15	-593	any annotated donor/acceptor	FALSE	canonical	1	5190	junction_3	280671.76475548797	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	398	1585	50.0	17	True	AATAAA	-9
PB.6444.1	chr2	+	5238	6	full-splice_match	PPM1B	ENST00000282412.8	2606	6	-39	-2593	-39	-581	multi-exon	TRUE	canonical	1	282867	junction_1	183240.76779647046	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	452	1891	30.0	-37	False	AATAAA	-21
PB.6444.3	chr2	+	3048	6	full-splice_match	PPM1B	ENST00000378551.6	3877	6	234	595	201	-595	multi-exon	FALSE	canonical	1	187338	junction_5	217251.13376974585	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	179	1342	50.0	236	False	AATAAA	-7
PB.6444.2	chr2	+	3002	6	full-splice_match	PPM1B	ENST00000378551.6	3877	6	-19	894	-19	-894	multi-exon	FALSE	canonical	1	187338	junction_5	217251.13376974585	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	432	1595	20.0	-17	False	AATACA	-22
PB.2206.1	chr11	-	3952	19	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-6	474	combination_of_known_junctions	TRUE	canonical	1	360823	junction_3	336832.93490661273	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	308	2116	40.0	-13	True	AATAAA	-14
PB.4381.4	chr16	+	1868	9	novel_not_in_catalog	AC106886.2	novel	883	5	NA	NA	7739	5980	intron_retention	FALSE	canonical	0	0	junction_5	133705.16399660625	NA	3	1	TRUE	NA	NA	NA	B	coding	249	750	855	1604	20.0	-19	True	AATAAA	-19
PB.2206.3	chr11	-	3524	20	full-splice_match	PICALM	ENST00000532317.5	3474	20	-37	-13	1	13	multi-exon	FALSE	canonical	1	459569	junction_3	345684.01859456813	NA	1	1	TRUE	NA	NA	NA	C	coding	610	1833	317	2149	20.0	-22	True	AATAAA	-31
PB.2206.2	chr11	-	3649	20	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-14	12	combination_of_known_junctions	FALSE	canonical	1	360823	junction_3	406542.17864237074	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	332	2275	20.0	-37	True	AATAAA	-30
PB.2206.5	chr11	-	3402	19	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-15	12	combination_of_known_junctions	FALSE	canonical	1	360823	junction_3	336832.93490661273	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	220	2028	20.0	-21	True	AATAAA	-30
PB.2206.4	chr11	-	3224	19	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-39	12	combination_of_known_junctions	FALSE	canonical	1	360823	junction_3	355798.002362803	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	57	1850	20.0	-9	True	AATAAA	-30
PB.4381.3	chr16	+	1860	9	full-splice_match	PHKG2	ENST00000563913.5	1791	9	-40	-29	1	-2	multi-exon	FALSE	canonical	1	314771	junction_1	46872.28751351911	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	680	1594	15.0	-22	True	AATAAA	-21
PB.4381.2	chr16	+	1944	8	novel_in_catalog	AC106886.2	novel	883	5	NA	NA	7719	5980	intron_retention	FALSE	canonical	1	314771	junction_1	49682.96996651748	NA	1	NA	TRUE	NA	NA	NA	B	coding	169	510	697	1206	20.0	-39	True	AATAAA	-19
PB.11903.4	chr9	-	3365	10	novel_not_in_catalog	INPP5E	novel	3394	10	NA	NA	-22	-5	any annotated donor/acceptor	FALSE	canonical	1	12411	junction_1	48860.4449831417	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	427	2235	30.0	-13	True	AATAAA	-17
PB.11903.5	chr9	-	4331	1	full-splice_match	INPP5E	ENST00000635815.1	4311	1	-45	25	-45	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	271	816	450	1265	85.0	7357	False	NA	NA
PB.11903.6	chr9	-	2536	1	full-splice_match	INPP5E	ENST00000635815.1	4311	1	-42	1817	-42	-1817	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	271	816	447	1262	35.0	7360	False	NA	NA
PB.11903.1	chr9	-	3942	9	novel_in_catalog	INPP5E	novel	3394	10	NA	NA	-50	4	intron_retention	FALSE	canonical	1	71928	junction_6	53852.21465022933	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	455	1909	35.0	7352	False	AATAAA	-26
PB.4136.10	chr16	+	3925	16	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	3	7	intron_retention	FALSE	canonical	1	586393	junction_6	159200.2898556267	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	2206	3399	35.0	-23	True	ATTAAA	-26
PB.10586.2	chr7	+	1381	4	novel_in_catalog	SBDSP1	novel	618	3	NA	NA	-3	597	combination_of_known_junctions	FALSE	canonical	1	172419	junction_1	127927.29281119021	NA	0	NA	TRUE	NA	NA	NA	B	coding	152	459	354	812	45.0	0	True	AATAAA	-15
PB.10586.3	chr7	+	2487	4	novel_in_catalog	SBDSP1	novel	618	3	NA	NA	-5	671	intron_retention	FALSE	canonical	1	235740	junction_1	98104.06435005636	NA	0	NA	TRUE	NA	NA	NA	B	coding	152	459	1386	1844	20.0	-2	True	AATAAA	-18
PB.9010.1	chr4	+	1755	7	novel_not_in_catalog	SMAD1	novel	616	2	NA	NA	7	-4	any annotated donor/acceptor	FALSE	canonical	1	7086	junction_1	80212.37586903629	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	217	1614	90.0	-1	True	NA	NA
PB.10586.1	chr7	+	1563	5	novel_not_in_catalog	SBDSP1	novel	618	3	NA	NA	-27	672	any annotated donor/acceptor	FALSE	canonical	1	3339	junction_4	164791.79869307816	NA	0	NA	TRUE	NA	NA	NA	B	coding	139	420	500	919	20.0	-24	True	AATAAA	-19
PB.4136.13	chr16	+	2452	19	full-splice_match	RHOT2	ENST00000315082.8	2539	19	45	42	-1	7	multi-exon	FALSE	canonical	1	340316	junction_10	182488.56233988077	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	70	1926	35.0	-1	True	ATTAAA	-26
PB.9010.5	chr4	+	1900	7	full-splice_match	SMAD1	ENST00000515385.1	2085	7	181	4	179	-4	multi-exon	FALSE	canonical	1	8564	junction_1	79676.88765814644	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	362	1759	90.0	-9	True	NA	NA
PB.9010.4	chr4	+	2000	7	novel_in_catalog	SMAD1	novel	616	2	NA	NA	-63	-4	combination_of_known_junctions	FALSE	canonical	1	1718	junction_1	82158.93921675366	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	462	1859	90.0	-7854	False	NA	NA
PB.4963.1	chr17	+	2218	1	incomplete-splice_match	WIPF2	ENST00000323571.8	7474	8	60572	2025	6281	-2025	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	100	303	1872	2174	100.0	-8064	False	NA	NA
PB.4136.12	chr16	+	2526	18	full-splice_match	RHOT2	ENST00000569675.5	2559	18	-10	43	1	6	multi-exon	FALSE	canonical	1	131615	junction_5	240865.945371621	NA	4	NA	TRUE	NA	NA	NA	C	coding	511	1536	466	2001	30.0	-7	True	ATTAAA	-25
PB.6949.1	chr2	+	3697	14	novel_in_catalog	CDK15	novel	1437	14	NA	NA	-82	-62	combination_of_known_junctions	TRUE	canonical	1	4634	junction_8	1545.3801355374055	NA	2	NA	TRUE	NA	NA	NA	A	coding	435	1308	169	1476	45.0	NA	False	AATAAA	-15
PB.2702.2	chr12	+	4203	13	full-splice_match	MBD6	ENST00000355673.7	4282	13	79	0	-17	0	multi-exon	FALSE	canonical	1	193042	junction_1	83774.36606589783	NA	1	NA	TRUE	NA	NA	NA	C	coding	1003	3012	278	3289	10.0	-28	True	NA	NA
PB.4446.11	chr16	-	1635	8	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	3	20	intron_retention	FALSE	non_canonical	0	0	junction_3	146258.47899663172	NA	2	NA	TRUE	NA	NA	NA	B	coding	254	765	297	1061	25.0	2	True	AGTAAA	-35
PB.4446.10	chr16	-	1410	7	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	-4	20	intron_retention	FALSE	non_canonical	0	0	junction_3	148400.46292315112	NA	0	NA	TRUE	NA	NA	NA	B	coding	254	765	72	836	25.0	-6	True	AGTAAA	-35
PB.4446.12	chr16	-	1974	10	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	0	-132	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	142569.3799350398	NA	2	NA	TRUE	NA	NA	NA	B	coding	254	765	789	1553	15.0	5	True	TTTAAA	-17
PB.4504.2	chr16	+	4064	11	full-splice_match	NFATC3	ENST00000563319.5	4122	11	22	36	-5	-36	multi-exon	FALSE	canonical	1	16785	junction_1	96144.6491971342	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	1743	3512	100.0	-1865	False	TTTAAA	-33
PB.4504.3	chr16	+	4138	11	novel_not_in_catalog	AC130462.1	novel	549	3	NA	NA	8014	104627	any annotated donor/acceptor	FALSE	canonical	1	10512	junction_10	98173.65024796623	NA	1	NA	TRUE	NA	NA	NA	B	coding	1087	3264	329	3592	100.0	-16	True	TTTAAA	-33
PB.4822.1	chr17	-	2368	3	full-splice_match	GRAP	ENST00000571380.1	610	3	1	-1759	1	1759	multi-exon	FALSE	canonical	1	558	junction_1	41.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	85	387	85.0	NA	False	NA	NA
PB.4504.1	chr16	+	3617	10	full-splice_match	NFATC3	ENST00000569766.5	3555	10	364	-426	-229	-37	multi-exon	FALSE	canonical	1	16785	junction_1	74854.8641118924	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	1401	3191	100.0	-1523	False	TTTAAA	-32
PB.4504.6	chr16	+	3050	10	novel_in_catalog	AC130462.1	novel	549	3	NA	NA	8027	104626	no_combination_of_known_junctions	FALSE	canonical	1	75	junction_8	98218.11857227028	NA	3	NA	TRUE	NA	NA	NA	B	coding	729	2190	316	2505	100.0	-3	True	TTTAAA	-32
PB.4504.7	chr16	+	2775	9	novel_in_catalog	AC130462.1	novel	549	3	NA	NA	8027	104626	no_combination_of_known_junctions	FALSE	canonical	1	3707	junction_1	108040.35705517349	NA	0	NA	TRUE	NA	NA	NA	B	coding	589	1770	455	2224	100.0	-3	True	TTTAAA	-32
PB.4504.4	chr16	+	4083	11	full-splice_match	NFATC3	ENST00000329524.8	6144	11	-300	2361	-8	-36	multi-exon	FALSE	canonical	1	44009	junction_10	84756.21948417708	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	325	3531	100.0	-12	True	TTTAAA	-33
PB.4504.5	chr16	+	2835	9	novel_in_catalog	AC130462.1	novel	549	3	NA	NA	8026	104626	no_combination_of_known_junctions	FALSE	canonical	1	4224	junction_1	83165.197701247	NA	0	NA	TRUE	NA	NA	NA	B	coding	596	1791	619	2409	100.0	-4	True	TTTAAA	-32
PB.6862.19	chr2	+	1561	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	197	309	11	-30	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	41	1177	25.0	-34	False	AATAAA	-25
PB.6862.18	chr2	+	5552	12	novel_not_in_catalog	HNRNPA3	novel	2067	11	NA	NA	11	-108	any annotated donor/acceptor	FALSE	canonical	1	811	junction_3	181589.9019303052	NA	3	NA	TRUE	NA	NA	NA	C	coding	378	1137	41	1177	15.0	-34	False	ATTAAA	-11
PB.4504.8	chr16	+	3815	10	full-splice_match	NFATC3	ENST00000346183.7	6040	10	-137	2362	63	-37	multi-exon	FALSE	canonical	1	95086	junction_1	52239.17277883795	NA	0	NA	TRUE	NA	NA	NA	C	coding	1075	3228	162	3389	100.0	-1117	False	TTTAAA	-32
PB.4136.16	chr16	+	2374	18	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-2	7	intron_retention	FALSE	canonical	1	25797	junction_8	254532.9281483335	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	91	1848	35.0	-22	True	ATTAAA	-26
PB.4136.19	chr16	+	2500	18	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-3	6	intron_retention	FALSE	canonical	1	30150	junction_9	293037.609545236	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	896	1975	30.0	-11	True	ATTAAA	-25
PB.234.4	chr1	-	2310	6	full-splice_match	SRSF4	ENST00000373795.6	2387	6	73	4	-24	-4	multi-exon	FALSE	canonical	1	416175	junction_5	223451.01222505124	NA	2	NA	TRUE	NA	NA	NA	C	coding	494	1485	163	1647	35.0	-17	True	AATAAA	-18
PB.234.7	chr1	-	2155	6	full-splice_match	SRSF4	ENST00000373795.6	2387	6	89	143	-8	-33	multi-exon	FALSE	canonical	1	416175	junction_5	223451.01222505124	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	147	1631	20.0	-1	True	AATAAA	-14
PB.4444.13	chr16	+	2129	2	novel_not_in_catalog	NLRC5	novel	4777	25	NA	NA	1	488	any annotated donor/acceptor	FALSE	canonical	1	2300	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	1	True	NA	NA
PB.4444.12	chr16	+	4230	19	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	1	496	intron_retention	FALSE	canonical	1	65445	junction_1	36117.732179714105	NA	3	NA	TRUE	NA	NA	NA	C	coding	720	2163	182	2344	90.0	1	True	NA	NA
PB.4444.11	chr16	+	4746	33	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	1	42	combination_of_known_junctions	FALSE	canonical	1	9601	junction_32	46094.27420412728	NA	13	2	TRUE	NA	NA	NA	C	coding	1384	4155	160	4314	35.0	1	True	NA	NA
PB.4444.10	chr16	+	2103	2	novel_not_in_catalog	NLRC5	novel	4777	25	NA	NA	0	439	any annotated donor/acceptor	FALSE	canonical	1	4540	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	ATTAAA	-13
PB.4444.17	chr16	+	3307	28	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	148	-1	combination_of_known_junctions	FALSE	canonical	1	4092	junction_7	50895.542182676334	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	53	2317	30.0	3954	False	AATAAA	-14
PB.4444.15	chr16	+	3519	31	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	47	2	combination_of_known_junctions	FALSE	canonical	1	4092	junction_10	47440.29520388993	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	264	2525	25.0	44	False	AATAAA	-18
PB.4444.14	chr16	+	4286	32	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	2	-10	combination_of_known_junctions	FALSE	canonical	1	6165	junction_21	51536.20234842104	NA	0	NA	TRUE	NA	NA	NA	C	coding	1376	4128	159	4286	80.0	2	True	NA	NA
PB.234.1	chr1	-	2255	5	full-splice_match	SRSF4	ENST00000466448.4	1264	5	-60	-931	45	3	multi-exon	FALSE	canonical	1	40257	junction_1	366977.16414138087	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	191	1585	25.0	4911	False	AATAAA	-25
PB.470.7	chr1	+	1007	9	incomplete-splice_match	SRSF11	ENST00000370951.5	2385	13	37	6811	-5	-5586	3prime_fragment	FALSE	canonical	1	189211	junction_1	500466.87222368614	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	921	85	1005	50.0	-5	True	NA	NA
PB.470.6	chr1	+	2879	2	novel_not_in_catalog	SRSF11	novel	2385	13	NA	NA	-6	-10988	any annotated donor/acceptor	FALSE	canonical	1	1676	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-6	True	AATAAA	-23
PB.470.5	chr1	+	3792	13	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	1	189211	junction_1	583930.8845690356	NA	2	1	TRUE	NA	NA	NA	C	coding	484	1455	96	1550	30.0	-16	True	AATAAA	-16
PB.8942.11	chr4	+	5015	16	novel_not_in_catalog	ALPK1	novel	304	2	NA	NA	0	-58	intron_retention	FALSE	canonical	1	46	junction_8	33224.86445794608	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	713	4525	20.0	-19	True	NA	NA
PB.470.3	chr1	+	1406	13	full-splice_match	SRSF11	ENST00000370951.5	2385	13	17	962	1	-70	multi-exon	FALSE	canonical	1	189211	junction_1	597998.9751532931	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1302	105	1406	75.0	-25	True	NA	NA
PB.470.2	chr1	+	2393	13	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-12	-7	combination_of_known_junctions	FALSE	canonical	1	189211	junction_1	583930.8845690356	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	134	1588	75.0	0	True	NA	NA
PB.470.1	chr1	+	4771	8	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-12	-5586	intron_retention	FALSE	canonical	1	70471	junction_1	537826.9097543543	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	606	4164	4769	50.0	0	True	NA	NA
PB.775.19	chr1	-	4421	5	novel_in_catalog	TPM3	novel	3149	7	NA	NA	-2	798	intron_retention	FALSE	canonical	1	511486	junction_4	836139.390258885	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	92	550	95.0	-3	True	NA	NA
PB.234.2	chr1	-	2232	7	novel_not_in_catalog	SRSF4	novel	2387	6	NA	NA	-2	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	344883.7442615829	NA	1	1	TRUE	NA	NA	NA	C	coding	494	1485	78	1562	25.0	5	True	AATAAA	-25
PB.4235.1	chr16	-	2712	4	full-splice_match	CARHSP1	ENST00000311052.9	746	4	3	-1969	0	-1	multi-exon	FALSE	canonical	1	636755	junction_3	282587.4169896616	NA	3	NA	TRUE	NA	NA	NA	A	coding	147	444	49	492	10.0	-1	True	AATAAA	-20
PB.8660.12	chr4	-	2835	5	full-splice_match	LETM1	ENST00000466175.5	1626	5	-199	-1010	93	-16	multi-exon	FALSE	canonical	1	115704	junction_4	60452.663237445544	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	205	1089	85.0	-20	True	NA	NA
PB.5423.1	chr18	+	1942	17	novel_in_catalog	RMC1	novel	1958	18	NA	NA	-14	1	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	123948.5300087897	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	367	1869	45.0	-16	True	AATAAA	-14
PB.391.6	chr1	-	1712	8	novel_in_catalog	ATPAF1	novel	4158	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	19931	junction_4	197444.7635654807	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	43	978	20.0	-1	True	AATAAA	-22
PB.5423.3	chr18	+	2129	20	novel_not_in_catalog	RMC1	novel	1958	18	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	115379.68925092444	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	115	2055	45.0	-6	True	AATAAA	-15
PB.5423.2	chr18	+	2021	18	novel_in_catalog	RMC1	novel	1958	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	121279.60536587519	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	445	1947	45.0	-7	True	AATAAA	-15
PB.5423.5	chr18	+	2036	20	novel_in_catalog	RMC1	novel	1958	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_11	107193.57354168728	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	113	1942	45.0	-4	True	AATAAA	-15
PB.5423.4	chr18	+	4304	10	incomplete-splice_match	RMC1	ENST00000590870.5	2102	20	-27	8200	-3	4377	3prime_fragment	FALSE	canonical	1	210942	junction_1	46435.6240898869	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	114	1139	100.0	-5	True	NA	NA
PB.5423.7	chr18	+	1841	16	novel_in_catalog	RMC1	novel	1958	18	NA	NA	0	1	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	127751.38067912306	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	101	1768	45.0	8	True	AATAAA	-14
PB.4280.4	chr16	-	2509	1	novel_in_catalog	ARL6IP1	novel	2409	6	NA	NA	1	-867	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-3	True	NA	NA
PB.5423.9	chr18	+	2182	21	novel_not_in_catalog	RMC1	novel	1958	18	NA	NA	3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	132893.15475132645	NA	2	NA	TRUE	NA	NA	NA	C	coding	343	1032	97	1128	50.0	12	True	AATAAA	-10
PB.5423.8	chr18	+	2144	20	full-splice_match	RMC1	ENST00000269221.7	2162	20	14	4	3	0	multi-exon	FALSE	non_canonical	0	0	junction_11	96254.54908569128	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	97	2070	45.0	12	True	AATAAA	-15
PB.8660.10	chr4	-	2343	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	97	3022	97	-3022	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2142	201	2342	50.0	-16	True	NA	NA
PB.4973.1	chr17	-	1680	3	antisense	novelGene_TBC1D3P7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2646	junction_2	7.5	NA	1	NA	FALSE	NA	NA	NA	A	coding	105	318	944	1261	15.0	NA	False	AATAAA	-23
PB.6850.11	chr2	-	4141	8	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	-3	intron_retention	TRUE	canonical	1	11	junction_4	219159.43880123773	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	243	1169	20.0	-1	True	AATAAA	-14
PB.6850.12	chr2	-	4138	8	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	1	-3	intron_retention	TRUE	non_canonical	0	0	junction_4	236494.45247702568	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	126	1166	20.0	0	True	AATAAA	-14
PB.6850.13	chr2	-	3941	6	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	-3	intron_retention	TRUE	non_canonical	0	0	junction_4	254728.07272650575	NA	2	NA	TRUE	NA	NA	NA	C	coding	118	357	773	1129	20.0	-1	True	AATAAA	-14
PB.6850.14	chr2	-	3759	6	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	19	-3	intron_retention	TRUE	non_canonical	0	0	junction_4	254728.07272650575	NA	6	NA	TRUE	NA	NA	NA	C	coding	200	603	185	787	20.0	18	True	AATAAA	-14
PB.6850.15	chr2	-	3790	6	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	-3	intron_retention	TRUE	non_canonical	0	0	junction_4	254728.07272650575	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	204	818	20.0	-1	True	AATAAA	-14
PB.6850.16	chr2	-	3619	5	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	-14	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	277006.9857431397	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	3	647	20.0	-52	True	AATAAA	-14
PB.9235.20	chr5	+	2895	12	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	13	-5	any annotated donor/acceptor	FALSE	canonical	1	207	junction_1	301111.1810559775	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	1149	2570	20.0	-23	True	AATAAA	-15
PB.6850.18	chr2	-	3742	6	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	4	-8	intron_retention	FALSE	non_canonical	0	0	junction_4	283029.8554297055	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	579	935	30.0	-34	True	AATAAA	-9
PB.6850.19	chr2	-	3873	8	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	-21	intron_retention	FALSE	non_canonical	0	0	junction_4	256455.16196125088	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	173	919	60.0	-1	True	NA	NA
PB.1127.6	chr1	+	4901	3	incomplete-splice_match	LYPLAL1	ENST00000366928.9	1898	5	34	15087	2	4293	3prime_fragment	FALSE	canonical	1	256380	junction_2	69857.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	14	397	60.0	0	True	NA	NA
PB.153.3	chr1	+	2290	7	novel_in_catalog	AL031281.2	novel	10598	6	NA	NA	27171	-8416	no_combination_of_known_junctions	FALSE	canonical	1	1904	junction_4	300329.1488985691	NA	0	NA	TRUE	NA	NA	NA	B	coding	233	702	162	863	20.0	11	True	ATTAAA	-19
PB.1127.7	chr1	+	1703	4	full-splice_match	LYPLAL1	ENST00000474379.5	1662	4	-46	5	-3	-5	multi-exon	FALSE	canonical	1	4382	junction_2	237257.34383622825	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	11	571	25.0	3	True	NA	NA
PB.3782.2	chr15	+	2472	10	full-splice_match	RAD51	ENST00000267868.7	2449	10	-19	-4	12	4	multi-exon	FALSE	canonical	1	138687	junction_1	47154.36595027908	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	288	1307	0.0	-391	False	AATAAA	-18
PB.3782.1	chr15	+	1704	10	full-splice_match	RAD51	ENST00000267868.7	2449	10	-1	746	-1	0	multi-exon	FALSE	canonical	1	138687	junction_1	47154.36595027908	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	270	1289	25.0	-15	True	AATAAA	-25
PB.9235.25	chr5	+	2956	13	full-splice_match	GPBP1	ENST00000424459.7	4683	13	129	1598	28	-1	multi-exon	FALSE	canonical	1	215850	junction_6	294555.18629351904	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1146	2627	35.0	-8	True	AATAAA	-19
PB.10985.9	chr8	+	2102	8	full-splice_match	FDFT1	ENST00000622850.2	1987	8	-122	7	-45	-7	multi-exon	FALSE	canonical	1	10797	junction_1	963013.1290691476	NA	3	NA	TRUE	NA	NA	NA	C	coding	353	1062	353	1414	25.0	-6174	False	AATAAA	-18
PB.775.10	chr1	-	1985	7	full-splice_match	TPM3	ENST00000509409.5	1248	7	9	-746	9	0	multi-exon	FALSE	canonical	1	20336	junction_6	814327.2493031016	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	164	712	30.0	-11	True	AATAAA	-15
PB.627.20	chr1	-	2687	21	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	11699	junction_6	37294.52289180678	NA	2	NA	TRUE	NA	NA	NA	C	coding	779	2340	123	2462	30.0	-34	True	AATAAA	-13
PB.1127.2	chr1	+	2469	5	full-splice_match	LYPLAL1	ENST00000366928.9	1898	5	6	-577	6	577	multi-exon	FALSE	canonical	1	256380	junction_2	113861.1154444308	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	42	755	60.0	0	True	NA	NA
PB.9235.26	chr5	+	3390	12	full-splice_match	GPBP1	ENST00000506184.6	2857	12	-32	-501	-32	-4	multi-exon	FALSE	canonical	1	285549	junction_1	250616.51210940647	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	1138	2559	20.0	0	True	AATAAA	-13
PB.153.2	chr1	+	1915	6	novel_in_catalog	AL031281.2	novel	10598	6	NA	NA	27162	-8624	no_combination_of_known_junctions	FALSE	canonical	1	1904	junction_3	273543.95624659664	NA	1	NA	TRUE	NA	NA	NA	B	coding	191	576	121	696	30.0	2	True	AATAAA	-19
PB.8189.2	chr3	-	2882	13	full-splice_match	IL17RD	ENST00000296318.11	8720	13	7	5831	7	365	multi-exon	FALSE	canonical	1	14173	junction_12	12112.900369200048	NA	2	NA	TRUE	NA	NA	NA	C	coding	739	2220	83	2302	25.0	15	False	AATATA	-11
PB.10985.8	chr8	+	2078	9	novel_not_in_catalog	FDFT1	novel	2289	8	NA	NA	3	-8	any annotated donor/acceptor	FALSE	canonical	1	2007	junction_7	1111025.8567730812	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	63	1121	25.0	30	True	AATAAA	-17
PB.4229.4	chr16	+	2051	13	novel_in_catalog	ALG1	novel	2870	14	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	6897	junction_8	125371.42119349365	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	8	919	35.0	0	True	NA	NA
PB.4229.3	chr16	+	1926	13	full-splice_match	ALG1	ENST00000262374.9	2132	13	11	195	8	2	multi-exon	FALSE	canonical	1	37706	junction_10	112810.56783276112	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	21	1415	25.0	-13	True	AAGAAA	-20
PB.7036.5	chr2	-	2074	18	novel_not_in_catalog	FARSB	novel	3369	17	NA	NA	250	-1209	any annotated donor/acceptor	FALSE	canonical	1	401	junction_16	268649.09695452993	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	476	1948	15.0	4	True	AATAAA	-16
PB.4229.1	chr16	+	1589	13	full-splice_match	ALG1	ENST00000262374.9	2132	13	-1	544	-1	-14	multi-exon	TRUE	canonical	1	37706	junction_10	112810.56783276112	NA	2	NA	TRUE	NA	NA	NA	C	coding	464	1395	33	1427	15.0	-25	True	NA	NA
PB.616.6	chr1	+	2370	1	novel_in_catalog	CTTNBP2NL	novel	5897	6	NA	NA	-74	-17473	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-23	True	NA	NA
PB.11085.6	chr8	+	4777	12	novel_in_catalog	ERLIN2	novel	550	3	NA	NA	-57	-1	combination_of_known_junctions	FALSE	canonical	1	45768	junction_1	114100.71924668823	NA	8	1	TRUE	NA	NA	NA	C	coding	339	1020	73	1092	30.0	-861	False	AATAAA	-29
PB.11457.3	chr9	+	2553	1	novel_in_catalog	LURAP1L	novel	1753	2	NA	NA	2	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	151	456	694	1149	20.0	0	True	AATAAA	-17
PB.11104.9	chr8	+	4185	13	full-splice_match	GPAT4	ENST00000396987.7	6298	13	2	2111	2	1496	multi-exon	FALSE	canonical	1	250447	junction_9	143963.24071121903	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	926	2296	25.0	2	True	AATAAA	-19
PB.777.27	chr1	+	5577	27	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	9	-6	intron_retention	FALSE	canonical	1	39010	junction_10	461688.27880924346	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	914	2752	15.0	-2	True	TATAAA	-13
PB.11011.12	chr8	+	3289	16	incomplete-splice_match	XPO7	ENST00000433566.8	4519	28	19347	-298	-2763	-2	5prime_fragment	FALSE	canonical	1	407636	junction_7	85309.00441076285	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	85	1794	25.0	-3501	False	AATAAA	-18
PB.10229.1	chr6	-	3785	18	full-splice_match	MAP7	ENST00000354570.7	4152	18	368	-1	368	1	multi-exon	FALSE	canonical	1	144231	junction_17	60993.73618665215	NA	1	NA	TRUE	NA	NA	NA	A	coding	749	2250	44	2293	20.0	1487	False	AATAAA	-17
PB.11104.5	chr8	+	3351	14	novel_not_in_catalog	GPAT4	novel	572	2	NA	NA	1	518	intron_retention	TRUE	canonical	1	7904	junction_1	226083.47343629022	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	1070	2440	15.0	-11	True	AATAAA	-16
PB.11104.4	chr8	+	4009	12	novel_in_catalog	GPAT4	novel	572	2	NA	NA	-8	518	intron_retention	FALSE	canonical	1	250447	junction_8	150110.77418618844	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	2223	3098	15.0	-20	True	AATAAA	-16
PB.11104.3	chr8	+	3123	13	full-splice_match	GPAT4	ENST00000396987.7	6298	13	-31	3206	-19	401	multi-exon	FALSE	canonical	1	250447	junction_9	143963.24071121903	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	959	2329	25.0	1	True	NA	NA
PB.11104.2	chr8	+	2624	13	full-splice_match	GPAT4	ENST00000396987.7	6298	13	-32	3706	-20	-78	multi-exon	FALSE	canonical	1	250447	junction_9	143963.24071121903	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	960	2330	10.0	0	True	ATTAAA	-18
PB.11104.1	chr8	+	3172	13	full-splice_match	GPAT4	ENST00000396987.7	6298	13	37	3089	22	518	multi-exon	FALSE	canonical	1	250447	junction_9	143963.24071121903	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	891	2261	15.0	-14	True	AATAAA	-16
PB.9678.3	chr5	-	3080	3	full-splice_match	MGAT1	ENST00000393340.7	3077	3	-3	0	-3	0	multi-exon	FALSE	canonical	1	59835	junction_2	77218.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	657	1994	35.0	-6	True	AATAAA	-15
PB.9678.2	chr5	-	3197	3	full-splice_match	MGAT1	ENST00000446023.6	3175	3	-22	0	-1	0	multi-exon	FALSE	canonical	1	41031	junction_2	86620.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	774	2111	35.0	-5	True	AATAAA	-15
PB.9678.1	chr5	-	3454	3	novel_in_catalog	MGAT1	novel	8863	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	57793	junction_2	78239.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	1031	2368	35.0	8	True	AATAAA	-15
PB.777.25	chr1	+	3970	28	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	9	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	426439.06471616786	NA	0	NA	TRUE	NA	NA	NA	C	coding	1084	3255	131	3385	15.0	-2	True	NA	NA
PB.9678.6	chr5	-	2722	2	full-splice_match	MGAT1	ENST00000307826.4	2761	2	34	5	34	0	multi-exon	FALSE	canonical	1	252184	junction_1	0.0	NA	22	1	TRUE	NA	NA	NA	C	coding	445	1338	299	1636	35.0	-13	True	AATAAA	-15
PB.9678.5	chr5	-	2785	2	full-splice_match	MGAT1	ENST00000427865.2	1919	2	68	-934	68	0	multi-exon	FALSE	canonical	1	126440	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	362	1699	35.0	16	True	AATAAA	-15
PB.3434.2	chr14	+	1010	8	full-splice_match	RTRAF	ENST00000261700.7	7075	8	68	5997	29	2	multi-exon	FALSE	canonical	1	600352	junction_3	500801.431631544	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	98	832	30.0	-3	True	AATAAA	-15
PB.9483.40	chr5	+	2582	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	3	-763	combination_of_known_junctions	FALSE	canonical	1	147046	junction_9	925883.5656630762	NA	1	NA	TRUE	NA	NA	NA	C	coding	781	2343	238	2580	65.0	3	True	AAGAAA	-23
PB.9678.8	chr5	-	2655	2	full-splice_match	MGAT1	ENST00000514283.1	619	2	6	-2042	6	0	multi-exon	FALSE	canonical	1	18242	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	232	1569	35.0	6578	False	AATAAA	-15
PB.8739.6	chr4	-	1742	7	novel_in_catalog	TMEM156	novel	1935	7	NA	NA	17	-78	combination_of_known_junctions	FALSE	canonical	1	8668	junction_5	27952.354939551456	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	78	884	100.0	0	True	NA	NA
PB.777.23	chr1	+	3469	28	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	151	combination_of_known_junctions	FALSE	canonical	1	11394	junction_27	417731.59364492685	NA	3	1	TRUE	NA	NA	NA	C	coding	1084	3255	130	3384	30.0	-3	True	AATAAA	-30
PB.777.21	chr1	+	3755	26	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	-2	no_combination_of_known_junctions	FALSE	canonical	1	6216	junction_14	419789.18782198284	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1737	130	1866	10.0	-3	True	TATAAA	-17
PB.11275.8	chr8	-	3132	7	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	10	0	intron_retention	FALSE	canonical	1	3345	junction_6	808097.9494419803	NA	2	1	TRUE	NA	NA	NA	C	coding	245	738	279	1016	10.0	-1	True	AATAAA	-13
PB.8109.1	chr3	-	3229	2	full-splice_match	CCDC71	ENST00000321895.6	1781	2	-4	-1444	-4	1444	multi-exon	FALSE	canonical	1	153397	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	112	1515	100.0	-8	True	NA	NA
PB.2609.8	chr12	-	2400	17	full-splice_match	SLC11A2	ENST00000547198.5	2486	17	-37	123	4	-123	multi-exon	FALSE	canonical	1	95576	junction_16	105476.85856378343	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	100	1806	40.0	8	True	NA	NA
PB.2609.9	chr12	-	4107	15	full-splice_match	SLC11A2	ENST00000545993.7	1958	15	30	-2179	30	-1	multi-exon	FALSE	canonical	1	14897	junction_14	117142.65659514628	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	103	1776	15.0	-26	True	ATTAAA	-18
PB.2609.6	chr12	-	2430	16	novel_in_catalog	SLC11A2	novel	609	6	NA	NA	25	-89	combination_of_known_junctions	FALSE	canonical	1	14897	junction_15	118549.4895405665	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	108	1802	25.0	1516	False	AAAACA	-26
PB.2609.7	chr12	-	2423	16	novel_in_catalog	SLC11A2	novel	609	6	NA	NA	-2	-123	combination_of_known_junctions	FALSE	canonical	1	14897	junction_15	118549.4895405665	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	135	1829	40.0	0	True	NA	NA
PB.2609.4	chr12	-	3030	17	full-splice_match	SLC11A2	ENST00000547198.5	2486	17	-50	-494	3	494	multi-exon	FALSE	canonical	1	95576	junction_16	105476.85856378343	NA	2	NA	TRUE	NA	NA	NA	C	coding	568	1707	113	1819	5.0	-5	True	NA	NA
PB.2609.5	chr12	-	2470	17	full-splice_match	SLC11A2	ENST00000547198.5	2486	17	-55	71	0	-71	multi-exon	FALSE	canonical	1	95576	junction_16	105476.85856378343	NA	1	1	TRUE	NA	NA	NA	C	coding	568	1707	118	1824	20.0	-10	True	AAAACA	-44
PB.2609.2	chr12	-	2199	18	full-splice_match	SLC11A2	ENST00000546636.5	2125	18	-43	-31	5	-5	multi-exon	FALSE	canonical	1	9028	junction_1	123292.6786624323	NA	1	1	TRUE	NA	NA	NA	C	coding	568	1707	136	1842	25.0	1923	False	AATAAA	-13
PB.2609.3	chr12	-	3702	16	novel_in_catalog	SLC11A2	novel	609	6	NA	NA	-45	-10	intron_retention	FALSE	canonical	1	14897	junction_15	118549.4895405665	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	76	1770	45.0	1	True	AATAAA	-8
PB.2609.1	chr12	-	3775	17	full-splice_match	SLC11A2	ENST00000547198.5	2486	17	-63	-1226	-1	1	multi-exon	FALSE	canonical	1	95576	junction_16	105476.85856378343	NA	1	1	TRUE	NA	NA	NA	C	coding	568	1707	126	1832	20.0	1933	False	AATAAA	-19
PB.8231.5	chr3	+	1441	8	incomplete-splice_match	PPP4R2	ENST00000356692.9	4984	9	26	3772	-7	137	intron_retention	FALSE	canonical	1	12799	junction_5	57299.95133309897	NA	6	1	TRUE	NA	NA	NA	C	coding	311	936	228	1163	75.0	0	True	NA	NA
PB.8231.4	chr3	+	1192	9	full-splice_match	PPP4R2	ENST00000356692.9	4984	9	22	3770	4	139	multi-exon	FALSE	canonical	1	12799	junction_5	191232.69079563124	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	960	232	1191	80.0	-4	True	NA	NA
PB.8231.6	chr3	+	1620	9	full-splice_match	PPP4R2	ENST00000356692.9	4984	9	27	3337	-6	572	multi-exon	FALSE	canonical	1	12799	junction_5	191232.69079563124	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	227	1480	45.0	1	True	AATAAA	-22
PB.8231.1	chr3	+	1884	8	incomplete-splice_match	PPP4R2	ENST00000356692.9	4984	9	16	3339	-2	570	intron_retention	FALSE	canonical	1	12799	junction_5	57299.95133309897	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	238	1173	40.0	-10	True	AATAAA	-20
PB.6531.1	chr2	-	2502	6	novel_not_in_catalog	PCBP1-AS1	novel	2386	11	NA	NA	-2	-18	any annotated donor/acceptor	TRUE	canonical	1	4266	junction_5	39973.95758440738	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	-24	True	NA	NA
PB.8231.3	chr3	+	2254	3	incomplete-splice_match	PPP4R2	ENST00000470976.1	1033	5	-14	12365	1	-9962	3prime_fragment	FALSE	canonical	1	74482	junction_2	11179.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	235	552	70.0	-7	True	TTTAAA	-10
PB.8231.2	chr3	+	2956	9	full-splice_match	PPP4R2	ENST00000356692.9	4984	9	19	2009	1	1900	multi-exon	FALSE	canonical	1	12799	junction_5	191232.69079563124	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	235	1488	35.0	-7	True	AATAAA	-14
PB.8427.10	chr3	-	1896	6	incomplete-splice_match	CEP70	ENST00000462419.5	1021	9	61	6809	-30	881	3prime_fragment	FALSE	canonical	1	14110	junction_4	87745.29768961981	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	182	760	65.0	-31	True	AATAAA	-25
PB.8231.8	chr3	+	1722	1	incomplete-splice_match	PPP4R2	ENST00000356692.9	4984	9	70671	22	3442	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	NA	False	NA	NA
PB.11482.1	chr9	+	5128	8	full-splice_match	MTAP	ENST00000644715.1	4909	8	-36	-183	-29	183	multi-exon	FALSE	canonical	1	60552	junction_2	99944.68520544916	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	137	988	10.0	-7495	False	NA	NA
PB.11482.2	chr9	+	4949	8	full-splice_match	MTAP	ENST00000644715.1	4909	8	-36	-4	-29	4	multi-exon	TRUE	canonical	1	60552	junction_2	99944.68520544916	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	137	988	30.0	-7495	False	NA	NA
PB.11482.3	chr9	+	4787	9	novel_not_in_catalog	MTAP	novel	6122	8	NA	NA	-27	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	114258.48201111537	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	135	986	25.0	-5	True	NA	NA
PB.8190.1	chr3	-	2206	5	novel_in_catalog	HESX1	novel	1308	7	NA	NA	-9	-63	intron_retention	FALSE	canonical	1	13719	junction_4	9353.627595083097	NA	0	NA	TRUE	NA	NA	NA	A	coding	185	558	1431	1988	35.0	-3	True	AATAAA	-8
PB.11482.5	chr9	+	1893	6	incomplete-splice_match	MTAP	ENST00000580718.1	1309	8	-27	6408	-7	-6133	3prime_fragment	FALSE	canonical	1	60552	junction_2	98090.62215930736	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	115	825	10.0	-14	True	NA	NA
PB.11482.6	chr9	+	2061	6	incomplete-splice_match	MTAP	ENST00000580718.1	1309	8	-25	6238	-5	-5963	3prime_fragment	FALSE	canonical	1	60552	junction_2	98090.62215930736	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	113	823	30.0	-12	True	NA	NA
PB.11482.7	chr9	+	1732	8	full-splice_match	MTAP	ENST00000644715.1	4909	8	-12	3189	-5	415	multi-exon	FALSE	canonical	1	60552	junction_2	99944.68520544916	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	113	964	75.0	-12	True	AATATA	-2
PB.11482.8	chr9	+	2231	8	full-splice_match	MTAP	ENST00000644715.1	4909	8	-9	2687	-2	-2	multi-exon	FALSE	canonical	1	60552	junction_2	99944.68520544916	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	110	961	20.0	-9	True	AATAAA	-19
PB.11482.9	chr9	+	6647	8	full-splice_match	MTAP	ENST00000380172.8	6122	8	99	-624	0	624	multi-exon	FALSE	canonical	1	60552	junction_2	99944.68520544916	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	108	959	70.0	-7	True	AATAAA	-5
PB.9650.8	chr5	-	3617	6	novel_not_in_catalog	DOK3	novel	2292	6	NA	NA	-28	-25	any annotated donor/acceptor	FALSE	canonical	1	1629	junction_5	67609.06994597692	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	244	1566	70.0	-13	True	NA	NA
PB.8807.2	chr4	-	3403	16	novel_in_catalog	YTHDC1	novel	6232	17	NA	NA	16	0	intron_retention	FALSE	canonical	1	408550	junction_15	154515.5802900579	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	321	893	10.0	-17	True	AATAAA	-19
PB.698.1	chr1	-	2143	5	incomplete-splice_match	NBPF14	ENST00000614999.4	10080	66	59443	106	57411	-106	5prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	B	coding	194	585	45	629	15.0	-2274525	True	ATTAAA	-15
PB.7030.2	chr2	+	1831	13	novel_in_catalog	GMPPA	novel	1544	13	NA	NA	0	3	intron_retention	FALSE	canonical	1	54841	junction_1	158007.25354596507	NA	1	1	TRUE	NA	NA	NA	C	coding	420	1263	375	1637	30.0	0	True	AATAAA	-20
PB.8807.3	chr4	-	3059	17	full-splice_match	YTHDC1	ENST00000344157.8	6232	17	232	2941	-104	-4	multi-exon	FALSE	canonical	1	408550	junction_16	149802.8352157715	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	105	2288	15.0	248	False	AATAAA	-12
PB.9686.4	chr5	-	4759	1	full-splice_match	TRIM52	ENST00000612671.1	4753	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	286	861	333	1193	75.0	-3	True	NA	NA
PB.8807.4	chr4	-	3322	17	full-splice_match	YTHDC1	ENST00000579690.5	2983	17	-336	-3	0	0	multi-exon	FALSE	canonical	1	211173	junction_4	179047.33620780113	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	337	2544	10.0	16	False	AATAAA	-19
PB.8180.4	chr3	-	2023	14	full-splice_match	TKT	ENST00000462138.5	3010	14	37	950	6	0	multi-exon	FALSE	canonical	1	3680343	junction_9	636152.6519321969	NA	3	NA	TRUE	NA	NA	NA	C	coding	623	1872	53	1924	45.0	-1	True	AATATA	-10
PB.8180.5	chr3	-	2163	15	novel_not_in_catalog	TKT	novel	3010	14	NA	NA	0	0	any annotated donor/acceptor	TRUE	canonical	1	5101	junction_13	1722724.7636246237	NA	4	1	TRUE	NA	NA	NA	C	coding	489	1470	595	2064	45.0	-1	True	AATATA	-10
PB.4830.10	chr17	+	4324	6	full-splice_match	SPECC1	ENST00000395522.6	2982	6	-64	-1278	25	-539	multi-exon	FALSE	canonical	1	14879	junction_5	142276.71196734902	NA	3	NA	TRUE	NA	NA	NA	C	coding	703	2112	179	2290	15.0	-5	True	AATAAA	-15
PB.4830.11	chr17	+	3268	5	novel_in_catalog	SPECC1	novel	614	5	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	1	49081	junction_1	156757.38143605072	NA	5	NA	TRUE	NA	NA	NA	C	coding	130	393	331	723	20.0	0	True	NA	NA
PB.4830.12	chr17	+	2073	11	novel_in_catalog	SPECC1	novel	614	5	NA	NA	32	-10	combination_of_known_junctions	FALSE	canonical	1	17458	junction_9	107980.77742913319	NA	8	NA	TRUE	NA	NA	NA	C	coding	369	1110	329	1438	80.0	2	True	NA	NA
PB.4830.13	chr17	+	3372	12	novel_in_catalog	SPECC1	novel	614	5	NA	NA	44	-279	combination_of_known_junctions	FALSE	canonical	1	17458	junction_10	97982.35788638283	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2847	160	3006	5.0	0	True	NA	NA
PB.11124.11	chr8	+	3070	18	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	1	-237	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	339274.35497233825	NA	2	1	TRUE	NA	NA	NA	C	coding	863	2592	88	2679	30.0	-15	True	AATAAA	-11
PB.11124.10	chr8	+	3164	17	full-splice_match	MCM4	ENST00000649973.1	4062	17	0	898	0	3	multi-exon	FALSE	canonical	1	413119	junction_2	251415.87070584335	NA	7	2	TRUE	NA	NA	NA	C	coding	863	2592	89	2680	95.0	-16	True	NA	NA
PB.11124.13	chr8	+	2782	18	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	2	-237	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	339274.35497233825	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	76	2715	30.0	-3	True	AATAAA	-11
PB.11085.2	chr8	+	4697	10	novel_in_catalog	ERLIN2	novel	550	3	NA	NA	-30	-3	combination_of_known_junctions	FALSE	canonical	1	3084	junction_2	136633.044641839	NA	14	1	TRUE	NA	NA	NA	C	coding	337	1014	1	1014	35.0	-5	True	AATAAA	-27
PB.5710.8	chr19	+	3588	17	novel_in_catalog	ILF3	novel	6119	20	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	1	79325	junction_8	585828.5067396504	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	1190	2293	20.0	-19	True	AATACA	-10
PB.5710.9	chr19	+	6063	20	novel_in_catalog	ILF3	novel	6119	20	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	416880	junction_17	492856.8130033199	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	286	2961	20.0	-13	True	AATAAA	-32
PB.11124.16	chr8	+	2858	16	full-splice_match	MCM4	ENST00000262105.6	4183	16	88	1237	66	3	multi-exon	FALSE	canonical	1	413119	junction_1	225197.5576610605	NA	1	NA	TRUE	NA	NA	NA	C	coding	863	2592	122	2713	30.0	-1919	False	CATAAA	-21
PB.5710.4	chr19	+	4383	17	incomplete-splice_match	ILF3	ENST00000587928.5	4230	20	-23	4080	20	2	3prime_fragment	FALSE	canonical	1	978607	junction_12	423858.0403499972	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	307	1623	5.0	-34	True	AATACA	-17
PB.5710.5	chr19	+	3092	19	novel_not_in_catalog	ILF3	novel	6119	20	NA	NA	-19	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	662699.23887723	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	303	2744	65.0	-30	True	NA	NA
PB.5710.6	chr19	+	3075	19	novel_not_in_catalog	ILF3	novel	6119	20	NA	NA	-18	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	646145.879112404	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	302	2695	75.0	-29	True	NA	NA
PB.5710.7	chr19	+	3191	18	novel_in_catalog	ILF3	novel	6119	20	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	1	12052	junction_17	574031.6263540643	NA	3	NA	TRUE	NA	NA	NA	C	coding	718	2157	299	2455	5.0	-26	True	AATACA	-14
PB.5710.1	chr19	+	1360	11	incomplete-splice_match	ILF3	ENST00000589998.5	2622	18	9	3460	9	-5	3prime_fragment	FALSE	canonical	1	1164883	junction_1	350666.7742718149	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1143	218	1360	65.0	24	True	NA	NA
PB.5710.2	chr19	+	6104	20	full-splice_match	ILF3	ENST00000449870.5	6119	20	15	0	15	0	multi-exon	FALSE	canonical	1	416880	junction_17	515439.08747124096	NA	1	NA	TRUE	NA	NA	NA	C	coding	895	2688	312	2999	20.0	-39	True	AATAAA	-35
PB.5710.3	chr19	+	3374	20	novel_in_catalog	ILF3	novel	6119	20	NA	NA	17	-145	combination_of_known_junctions	FALSE	canonical	1	416880	junction_17	492856.8130033199	NA	1	1	TRUE	NA	NA	NA	C	coding	891	2676	310	2985	20.0	-37	True	NA	NA
PB.11695.2	chr9	-	3920	2	novel_not_in_catalog	ZYG11AP1	novel	837	2	NA	NA	-40473	2651	intron_retention	FALSE	canonical	1	32	junction_1	0.0	NA	20	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-3	True	ATTAAA	-20
PB.11614.2	chr9	+	3083	17	full-splice_match	CEP78	ENST00000643273.1	2722	17	-45	-316	0	-118	multi-exon	FALSE	canonical	1	89710	junction_1	36903.97150073883	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	287	2404	45.0	-16	True	NA	NA
PB.9346.10	chr5	-	3045	11	full-splice_match	FAM172A	ENST00000395965.7	4312	11	1	1266	1	-1266	multi-exon	FALSE	canonical	1	57867	junction_10	39746.954661835414	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	191	1393	25.0	0	True	ATTAAA	-19
PB.170.4	chr1	-	2596	3	novel_not_in_catalog	CNR2	novel	5254	2	NA	NA	1	-27834	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	434.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	131	396	205	600	100.0	0	True	NA	NA
PB.170.2	chr1	-	2731	2	full-splice_match	CNR2	ENST00000374472.4	5254	2	-29	2552	-29	-2552	multi-exon	FALSE	canonical	1	17661	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	360	1083	192	1274	35.0	-1	True	AATAAA	-17
PB.170.3	chr1	-	2021	2	full-splice_match	CNR2	ENST00000374472.4	5254	2	0	3233	0	-3233	multi-exon	FALSE	canonical	1	17661	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	163	1245	65.0	-1	True	NA	NA
PB.170.1	chr1	-	2709	3	novel_not_in_catalog	CNR2	novel	5254	2	NA	NA	-82	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	8830.5	NA	2	1	TRUE	NA	NA	NA	C	coding	360	1083	245	1327	35.0	62	False	ATTAAA	-18
PB.528.2	chr1	+	3070	6	full-splice_match	LRRC8B	ENST00000330947.6	7593	6	36	4487	36	-4471	multi-exon	FALSE	canonical	1	16390	junction_1	20954.509973750282	NA	19	NA	TRUE	NA	NA	NA	C	coding	803	2412	325	2736	80.0	43	False	NA	NA
PB.10830.16	chr7	+	2834	9	full-splice_match	IRF5	ENST00000402030.6	2786	9	-42	-6	7	6	multi-exon	FALSE	canonical	1	69172	junction_1	94982.81909039852	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	115	1611	10.0	-34	True	NA	NA
PB.5726.3	chr19	+	2878	17	novel_in_catalog	PRKCSH	novel	2209	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	642974	junction_10	692884.4038221869	NA	1	NA	TRUE	NA	NA	NA	B	coding	228	687	158	844	15.0	-8	True	AATAAA	-16
PB.5726.2	chr19	+	1998	17	novel_not_in_catalog	PRKCSH	novel	2209	19	NA	NA	-2	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	984388.9015074197	NA	2	1	TRUE	NA	NA	NA	B	coding	499	1500	163	1662	15.0	-5628	False	AATAAA	-16
PB.5726.1	chr19	+	3314	17	novel_not_in_catalog	PRKCSH	novel	2209	19	NA	NA	-8	0	intron_retention	FALSE	canonical	1	1732	junction_11	1010740.9305470058	NA	4	NA	TRUE	NA	NA	NA	B	coding	527	1584	178	1761	15.0	-5639	False	AATAAA	-16
PB.5726.7	chr19	+	2392	18	novel_not_in_catalog	PRKCSH	novel	2209	19	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	495	junction_17	1089211.7838761085	NA	0	NA	TRUE	NA	NA	NA	B	coding	528	1587	157	1743	10.0	-3	True	AATAAA	-17
PB.5726.6	chr19	+	2076	18	novel_in_catalog	PRKCSH	novel	2209	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	642974	junction_11	675118.9062452163	NA	1	NA	TRUE	NA	NA	NA	B	coding	528	1587	154	1740	15.0	-4	True	AATAAA	-16
PB.5726.5	chr19	+	2097	18	novel_in_catalog	PRKCSH	novel	2209	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	514031	junction_11	699698.3693332128	NA	0	NA	TRUE	NA	NA	NA	B	coding	535	1608	154	1761	15.0	-4	True	AATAAA	-16
PB.5726.4	chr19	+	2823	17	novel_in_catalog	PRKCSH	novel	2209	19	NA	NA	1	-393	combination_of_known_junctions	FALSE	canonical	1	514031	junction_11	693909.0619691167	NA	1	NA	TRUE	NA	NA	NA	B	coding	535	1608	154	1761	85.0	-4	True	NA	NA
PB.5726.9	chr19	+	2316	18	novel_not_in_catalog	PRKCSH	novel	2209	19	NA	NA	13	0	any annotated donor/acceptor	FALSE	canonical	1	40524	junction_17	926375.1591713463	NA	1	1	TRUE	NA	NA	NA	B	coding	528	1587	137	1723	15.0	13	True	AATAAA	-16
PB.5726.8	chr19	+	1949	17	novel_not_in_catalog	PRKCSH	novel	2209	19	NA	NA	2	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	993782.7189097486	NA	2	NA	TRUE	NA	NA	NA	B	coding	489	1470	148	1617	20.0	2	True	AATAAA	-12
PB.8645.8	chr4	+	3450	13	novel_in_catalog	PIGG	novel	1784	9	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	44865	junction_1	61889.41985705679	NA	1	NA	TRUE	NA	NA	NA	C	coding	894	2685	608	3292	25.0	-8	True	AATAAA	-15
PB.9483.41	chr5	+	3238	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	94176	junction_1	1114965.853519328	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	19	1536	30.0	-11	True	AAAAAG	-45
PB.3549.6	chr14	+	2575	10	full-splice_match	PTGR2	ENST00000267568.8	2559	10	-13	-3	6	3	multi-exon	FALSE	canonical	1	24741	junction_1	43112.83986367763	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	235	1290	20.0	-13	True	AGTAAA	-20
PB.3549.7	chr14	+	2450	4	novel_not_in_catalog	PTGR2	novel	2543	10	NA	NA	10	3012	any annotated donor/acceptor	FALSE	canonical	1	17599	junction_3	58355.926847426745	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	10	True	NA	NA
PB.3549.4	chr14	+	2458	10	full-splice_match	PTGR2	ENST00000555228.5	2543	10	92	-7	8	4	multi-exon	FALSE	canonical	1	28908	junction_1	41934.82961029465	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	117	1172	20.0	-11	True	AGTAAA	-21
PB.3549.5	chr14	+	2633	11	novel_not_in_catalog	PTGR2	novel	2543	10	NA	NA	8	4	any annotated donor/acceptor	FALSE	canonical	1	1628	junction_5	65240.57014956261	NA	25	2	TRUE	NA	NA	NA	C	coding	217	654	694	1347	20.0	23	True	AGTAAA	-21
PB.3549.2	chr14	+	1630	10	full-splice_match	PTGR2	ENST00000555661.5	3851	10	-14	2235	-12	13	multi-exon	FALSE	canonical	1	71198	junction_1	30590.753006524254	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	160	1215	30.0	1	True	AATAAA	-44
PB.3549.3	chr14	+	2000	10	full-splice_match	PTGR2	ENST00000555661.5	3851	10	-13	1864	-11	384	multi-exon	FALSE	canonical	1	71198	junction_1	30590.753006524254	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	159	1214	50.0	2	True	NA	NA
PB.3549.1	chr14	+	2291	9	novel_in_catalog	PTGR2	novel	2543	10	NA	NA	-13	3	no_combination_of_known_junctions	TRUE	canonical	1	14893	junction_5	50401.75752081965	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	161	1006	20.0	0	True	AGTAAA	-20
PB.1237.3	chr1	-	2485	13	full-splice_match	ADSS	ENST00000366535.3	2780	13	293	2	293	-2	multi-exon	FALSE	canonical	1	134946	junction_8	210463.7215666079	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	25	1395	10.0	287	False	ATTAAA	-19
PB.1543.1	chr10	+	1780	4	full-splice_match	HHEX	ENST00000282728.9	1727	4	-53	0	-53	0	multi-exon	FALSE	canonical	1	140658	junction_1	119824.45075006835	NA	0	NA	TRUE	NA	NA	NA	A	coding	270	813	90	902	25.0	-5	True	AATAAA	-27
PB.8645.9	chr4	+	2341	9	incomplete-splice_match	PIGG	ENST00000453061.6	3218	13	8	15442	1	-824	3prime_fragment	FALSE	canonical	1	154533	junction_8	27119.507608684566	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	99	2171	40.0	-2	True	AATACA	-33
PB.3801.3	chr15	-	2854	6	full-splice_match	EHD4	ENST00000220325.8	6416	6	21	3541	-5	-3541	multi-exon	FALSE	canonical	1	431861	junction_2	43655.18270904384	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	64	1689	50.0	-4	True	GATAAA	-14
PB.3801.2	chr15	-	3972	6	full-splice_match	EHD4	ENST00000220325.8	6416	6	1	2443	1	-2443	multi-exon	FALSE	canonical	1	431861	junction_2	43655.18270904384	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	84	1709	25.0	-24	True	TATAAA	-16
PB.3801.1	chr15	-	5320	6	full-splice_match	EHD4	ENST00000220325.8	6416	6	24	1072	-2	-1072	multi-exon	TRUE	canonical	1	431861	junction_2	43655.18270904384	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	61	1686	15.0	-1	True	AATAAA	-20
PB.12103.1	chrX	+	1438	1	full-splice_match	MAGEH1	ENST00000342972.2	1462	1	22	2	22	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	219	660	249	908	15.0	-38	True	AATAAA	-15
PB.3801.6	chr15	-	2488	6	full-splice_match	EHD4	ENST00000220325.8	6416	6	25	3903	-1	-3903	multi-exon	FALSE	canonical	1	431861	junction_2	43655.18270904384	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	60	1685	15.0	0	True	NA	NA
PB.493.8	chr1	+	4802	7	novel_in_catalog	IFI44	novel	819	7	NA	NA	0	-3	intron_retention	FALSE	canonical	1	315311	junction_1	120864.13485041329	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	85	1149	25.0	1	True	AATAAA	-21
PB.493.9	chr1	+	3767	1	novel_in_catalog	IFI44	novel	819	7	NA	NA	0	-1913	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	156	471	365	835	55.0	1	True	CATAAA	-14
PB.1773.11	chr11	+	7030	11	novel_in_catalog	STIM1	novel	625	5	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	276323	junction_10	84263.8442299543	NA	3	NA	TRUE	NA	NA	NA	B	coding	493	1482	586	2067	15.0	22	True	AATAAA	-21
PB.1773.10	chr11	+	8804	11	incomplete-splice_match	STIM1	ENST00000300737.8	4038	12	-29	1	-29	-1	intron_retention	FALSE	canonical	1	329827	junction_5	72457.73073703039	NA	8	NA	TRUE	NA	NA	NA	B	coding	647	1944	599	2542	10.0	9	True	AATAAA	-22
PB.1773.13	chr11	+	3080	9	incomplete-splice_match	STIM1	ENST00000300737.8	4038	12	199822	6	1	-6	5prime_fragment	FALSE	canonical	1	276323	junction_8	91687.19867298815	NA	0	NA	TRUE	NA	NA	NA	B	coding	522	1569	107	1675	20.0	NA	False	AATAAA	-17
PB.3801.8	chr15	-	2059	3	full-splice_match	EHD4	ENST00000569223.1	2032	3	-27	0	-1	0	multi-exon	FALSE	canonical	1	474533	junction_1	1631.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	189	570	86	655	95.0	-26	True	NA	NA
PB.493.2	chr1	+	1265	8	novel_in_catalog	IFI44	novel	819	7	NA	NA	-17	-7	combination_of_known_junctions	FALSE	canonical	1	72070	junction_1	194446.034553738	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	520	1005	20.0	-8219	False	AATAAA	-17
PB.493.3	chr1	+	2492	9	novel_not_in_catalog	IFI44	novel	819	7	NA	NA	-9	-6	any annotated donor/acceptor	FALSE	canonical	1	9574	junction_7	186416.03747494306	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	95	1333	20.0	-9	True	AATAAA	-18
PB.493.1	chr1	+	1685	9	full-splice_match	IFI44	ENST00000370747.8	1687	9	0	2	0	-2	multi-exon	FALSE	canonical	1	201516	junction_7	140380.7002497472	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	86	1420	25.0	0	True	AATAAA	-22
PB.8993.3	chr4	+	5301	1	novel_in_catalog	RAB33B	novel	4562	2	NA	NA	23	4845	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	137	414	367	780	90.0	-22	True	NA	NA
PB.10255.9	chr6	+	5377	5	novel_in_catalog	AL049844.1	novel	762	5	NA	NA	36268	16059	intron_retention	FALSE	canonical	1	254400	junction_1	85568.00906004533	NA	1	NA	TRUE	NA	NA	NA	B	coding	101	306	4977	5282	75.0	-7	True	AATACA	-8
PB.10985.3	chr8	+	1523	7	novel_in_catalog	FDFT1	novel	2289	8	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	37425	junction_5	993182.2345029245	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	89	1165	30.0	4	True	ATTAAA	-21
PB.11038.3	chr8	-	5852	13	full-splice_match	ENTPD4	ENST00000358689.8	5861	13	1	8	1	-8	multi-exon	FALSE	canonical	1	144087	junction_12	78344.02740419796	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	236	2086	10.0	0	True	AATAAA	-22
PB.8841.1	chr4	-	4735	12	full-splice_match	CNOT6L	ENST00000512485.6	1890	12	-668	-2177	-668	-32	multi-exon	FALSE	canonical	1	10491	junction_3	53237.73997227317	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	705	2357	75.0	1609	False	AATAAA	-30
PB.9434.10	chr5	-	2638	13	incomplete-splice_match	FNIP1	ENST00000307968.11	6388	17	-98	30106	-2	5777	3prime_fragment	FALSE	canonical	1	90497	junction_7	23436.4739685045	NA	1	NA	TRUE	NA	NA	NA	C	coding	846	2538	99	2636	70.0	-3	True	AGTAAA	-42
PB.8485.6	chr3	-	2459	6	novel_not_in_catalog	SSR3	novel	3716	5	NA	NA	-3	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	449531.30164801655	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	40	597	30.0	-22	True	ATTAAA	-11
PB.5354.1	chr17	+	3779	38	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	73	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	181172.09711049372	NA	2	1	TRUE	NA	NA	NA	B	coding	631	1896	153	2048	20.0	-3059	False	TATAAA	-11
PB.5354.2	chr17	+	4436	38	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	-1	479	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	181172.09711049372	NA	2	1	TRUE	NA	NA	NA	B	coding	694	2085	132	2216	25.0	-2	True	AATAAA	-20
PB.5354.3	chr17	+	3589	34	novel_in_catalog	TBCD	novel	7168	39	NA	NA	-1	-3	no_combination_of_known_junctions	FALSE	canonical	1	8608	junction_17	188915.10307406323	NA	0	NA	TRUE	NA	NA	NA	B	coding	1073	3222	132	3353	20.0	-2	True	TATAAA	-11
PB.5354.4	chr17	+	3894	37	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	188528.53421666916	NA	2	1	TRUE	NA	NA	NA	B	coding	677	2034	130	2163	20.0	0	True	TATAAA	-11
PB.5354.5	chr17	+	6415	37	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	1	3	intron_retention	FALSE	non_canonical	0	0	junction_20	183547.69325699867	NA	2	1	TRUE	NA	NA	NA	B	coding	468	1407	4760	6166	10.0	0	True	TATAAA	-24
PB.5354.6	chr17	+	3354	34	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	2	-543	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	172472.54072607294	NA	3	2	TRUE	NA	NA	NA	B	coding	694	2085	129	2213	60.0	1	True	NA	NA
PB.5354.7	chr17	+	3857	38	novel_in_catalog	TBCD	novel	7168	39	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	21255	junction_17	178284.97790208142	NA	0	NA	TRUE	NA	NA	NA	B	coding	1165	3498	123	3620	15.0	7	True	TATAAA	-12
PB.5354.8	chr17	+	3800	36	novel_in_catalog	TBCD	novel	7168	39	NA	NA	10	-3	no_combination_of_known_junctions	FALSE	canonical	1	4493	junction_19	190733.8299808807	NA	3	1	TRUE	NA	NA	NA	B	coding	1147	3444	121	3564	20.0	9	True	TATAAA	-11
PB.9787.15	chr6	+	2864	6	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	32	-5934	any annotated donor/acceptor	FALSE	canonical	1	282	junction_2	100751.14897925482	NA	7	NA	TRUE	NA	NA	NA	C	coding	193	582	678	1259	95.0	3	True	NA	NA
PB.1517.17	chr10	-	2603	10	full-splice_match	ATAD1	ENST00000308448.11	4640	10	135	1902	135	-297	multi-exon	FALSE	canonical	1	102402	junction_9	147357.84445883957	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	245	1330	10.0	-1	True	NA	NA
PB.8485.8	chr3	-	3180	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	70	466	3	-466	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	9	NA	TRUE	NA	NA	NA	C	coding	185	558	26	583	15.0	-8	True	AATAAA	-41
PB.8485.9	chr3	-	3040	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	67	609	0	-609	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	29	586	40.0	-11	True	AATAAA	-20
PB.8853.35	chr4	-	3785	26	full-splice_match	SEC31A	ENST00000311785.11	3909	26	124	0	1	0	multi-exon	FALSE	canonical	1	277702	junction_5	302849.90903092845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1106	3321	53	3373	20.0	6	True	ATTAAA	-13
PB.8853.34	chr4	-	3898	24	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	4773	junction_7	337681.1177106107	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	115	3486	20.0	-56	True	ATTAAA	-13
PB.8853.37	chr4	-	3723	25	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	83080	junction_12	325729.4243560222	NA	0	NA	TRUE	NA	NA	NA	C	coding	1080	3243	69	3311	20.0	-10	True	ATTAAA	-13
PB.1517.16	chr10	-	2479	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-71	-255	any annotated donor/acceptor	FALSE	canonical	1	132168	junction_6	132309.85500243522	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	79	1164	25.0	-39	True	NA	NA
PB.8853.31	chr4	-	4048	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	15006	junction_1	339369.2151357185	NA	2	1	TRUE	NA	NA	NA	C	coding	1181	3546	91	3636	20.0	-32	True	ATTAAA	-13
PB.8853.30	chr4	-	4034	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	2942	junction_25	344336.4473423376	NA	1	NA	TRUE	NA	NA	NA	C	coding	1164	3495	128	3622	20.0	16	True	ATTAAA	-13
PB.8853.32	chr4	-	3961	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	54702	junction_6	377767.19310501777	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3414	136	3549	20.0	9350	False	ATTAAA	-13
PB.10985.2	chr8	+	2405	8	full-splice_match	FDFT1	ENST00000220584.8	2176	8	130	-359	0	359	multi-exon	FALSE	canonical	1	2107054	junction_1	304246.2073588509	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	93	1346	100.0	0	True	NA	NA
PB.1517.11	chr10	-	2637	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-53	-79	any annotated donor/acceptor	FALSE	canonical	1	132168	junction_6	132309.85500243522	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	61	1146	60.0	-21	True	AATACA	-8
PB.1686.12	chr10	+	5116	28	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	-30	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	106913.03490764461	NA	0	NA	TRUE	NA	NA	NA	B	coding	795	2388	1919	4306	10.0	-14	True	AATAAA	-16
PB.8853.38	chr4	-	3674	24	full-splice_match	SEC31A	ENST00000513858.5	3687	24	12	1	-5	0	multi-exon	FALSE	canonical	1	277702	junction_5	296740.48341385456	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	59	3262	20.0	0	True	ATTAAA	-13
PB.1686.10	chr10	+	5182	1	novel_in_catalog	WDR11	novel	4732	29	NA	NA	2	-2221	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.1686.11	chr10	+	4757	29	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	-66	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_28	106588.67378855891	NA	0	NA	TRUE	NA	NA	NA	B	coding	1196	3591	357	3947	10.0	-50	True	AATAAA	-16
PB.11790.6	chr9	+	4793	26	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	3	-1	intron_retention	FALSE	canonical	1	58008	junction_1	71388.97788930727	NA	0	NA	TRUE	NA	NA	NA	C	coding	1439	4320	196	4515	75.0	-29	True	AAAAAG	-30
PB.9676.1	chr5	-	3040	19	full-splice_match	GFPT2	ENST00000253778.12	3093	19	51	2	0	-2	multi-exon	FALSE	canonical	1	100802	junction_18	29891.24034182656	NA	1	NA	TRUE	NA	NA	NA	A	coding	682	2049	120	2168	15.0	-1	True	AATAAA	-21
PB.1517.13	chr10	-	2781	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	338	-1	any annotated donor/acceptor	FALSE	canonical	1	570	junction_9	164307.91778040805	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	127	1212	20.0	370	False	AATAAA	-14
PB.1517.12	chr10	-	3176	11	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-52	-1	any annotated donor/acceptor	FALSE	canonical	1	7457	junction_6	177035.22279241495	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	879	1607	20.0	-20	True	AATAAA	-14
PB.8499.1	chr3	-	3766	2	novel_in_catalog	AC079594.2	novel	3360	19	NA	NA	31	-208049	intron_retention	FALSE	canonical	1	16174	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	403	1212	86	1297	25.0	32	False	AATAAA	-18
PB.7056.1	chr2	+	2646	19	novel_not_in_catalog	SP140L	novel	1781	15	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	658	junction_16	66351.78972969255	NA	2	1	TRUE	NA	NA	NA	C	coding	571	1716	97	1812	35.0	-19	True	NA	NA
PB.8499.3	chr3	-	3853	3	full-splice_match	TRIM59	ENST00000309784.8	3867	3	13	1	13	-1	multi-exon	FALSE	canonical	1	78366	junction_2	441.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	174	1385	25.0	14	False	AATAAA	-17
PB.8499.2	chr3	-	3881	3	full-splice_match	TRIM59	ENST00000494486.1	577	3	41	-3345	41	-1	multi-exon	FALSE	canonical	1	14337	junction_2	32456.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	403	1212	202	1413	25.0	-1	True	AATAAA	-17
PB.5362.7	chr18	-	4298	12	full-splice_match	YES1	ENST00000314574.4	4441	12	-41	184	-13	-184	multi-exon	FALSE	canonical	1	106322	junction_8	86248.38758976721	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	175	1806	20.0	-38	True	AAGAAA	-31
PB.5362.6	chr18	-	4392	11	novel_in_catalog	YES1	novel	4554	12	NA	NA	33	-3	no_combination_of_known_junctions	FALSE	canonical	1	11535	junction_1	102277.9736663276	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	220	1719	25.0	922	False	AATAAA	-17
PB.5362.5	chr18	-	4467	12	full-splice_match	YES1	ENST00000314574.4	4441	12	-28	2	0	-2	multi-exon	FALSE	canonical	1	106322	junction_8	86248.38758976721	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	162	1793	25.0	-25	True	AATAAA	-18
PB.5362.3	chr18	-	4508	12	full-splice_match	YES1	ENST00000584307.5	4639	12	-29	160	-29	0	multi-exon	FALSE	canonical	1	15797	junction_11	97214.78264957087	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	201	1832	20.0	-18	True	AATAAA	-20
PB.5362.1	chr18	-	4685	12	full-splice_match	YES1	ENST00000314574.4	4441	12	-84	-160	35	0	multi-exon	FALSE	canonical	1	106322	junction_8	86248.38758976721	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	218	1849	10.0	924	False	ATTAAA	-22
PB.528.5	chr1	+	6302	6	full-splice_match	LRRC8B	ENST00000330947.6	7593	6	-18	1309	2	-1293	multi-exon	FALSE	canonical	1	16390	junction_1	20954.509973750282	NA	2	NA	TRUE	NA	NA	NA	C	coding	803	2412	379	2790	60.0	-11	True	ATTAAA	-35
PB.7144.2	chr20	+	2017	3	incomplete-splice_match	MRPS26	ENST00000380325.3	1127	4	106	1	106	-1	intron_retention	FALSE	canonical	1	718991	junction_1	39872.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	19	759	25.0	-1	True	NA	NA
PB.5362.9	chr18	-	2030	12	full-splice_match	YES1	ENST00000314574.4	4441	12	-83	2494	36	-2494	multi-exon	FALSE	canonical	1	106322	junction_8	86248.38758976721	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	217	1848	35.0	925	False	ATTAAA	-13
PB.5362.8	chr18	-	2233	12	full-splice_match	YES1	ENST00000314574.4	4441	12	-56	2264	-28	-2264	multi-exon	FALSE	canonical	1	106322	junction_8	86248.38758976721	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	190	1821	50.0	-53	True	AATAAA	-15
PB.11790.7	chr9	+	5141	26	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-2	10	intron_retention	FALSE	canonical	1	58008	junction_1	62617.77022730847	NA	1	1	TRUE	NA	NA	NA	C	coding	1460	4383	166	4548	30.0	1	True	AATAAA	-29
PB.570.9	chr1	+	2784	11	full-splice_match	SLC30A7	ENST00000357650.8	1281	11	-158	-1345	20	1345	multi-exon	FALSE	canonical	1	137600	junction_8	30698.039475510483	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	168	1298	35.0	-24	True	AATACA	-19
PB.5604.2	chr19	-	1496	7	novel_not_in_catalog	AES	novel	3274	2	NA	NA	275	0	intron_retention	FALSE	non_canonical	0	0	junction_6	2488101.176500644	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	444	839	20.0	-30	True	AATAAA	-13
PB.4201.12	chr16	+	3224	6	novel_not_in_catalog	ZNF263	novel	1721	2	NA	NA	-5	-9	any annotated donor/acceptor	FALSE	canonical	1	6666	junction_2	40240.97057278812	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	319	2331	40.0	10	True	AATAAA	-11
PB.4201.13	chr16	+	3082	5	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	1	7739	junction_1	44510.23693699574	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	763	2187	30.0	12	True	AATAAA	-13
PB.4201.10	chr16	+	4829	3	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-9	-9	intron_retention	FALSE	canonical	1	101934	junction_1	11800.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	2554	3936	40.0	6	True	AATAAA	-11
PB.4201.11	chr16	+	3706	5	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-7	-9	intron_retention	FALSE	canonical	1	85580	junction_1	15052.939804237576	NA	4	NA	TRUE	NA	NA	NA	C	coding	479	1440	1374	2813	40.0	8	True	AATAAA	-11
PB.7534.4	chr21	+	3009	15	full-splice_match	ABCG1	ENST00000361802.6	3034	15	22	3	22	-3	multi-exon	FALSE	canonical	1	62093	junction_1	38597.2721199574	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	124	2160	25.0	0	True	AATATA	-16
PB.1517.18	chr10	-	2329	9	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-53	-297	any annotated donor/acceptor	FALSE	canonical	1	15001	junction_3	169668.64866810065	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	61	1056	10.0	-21	True	NA	NA
PB.10092.28	chr6	-	2136	12	full-splice_match	SYNCRIP	ENST00000355238.10	6449	12	-6	4319	-6	1458	multi-exon	FALSE	canonical	1	75283	junction_7	342140.6997403164	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	214	1902	50.0	1077	False	ATTAAA	-20
PB.10985.4	chr8	+	1851	7	novel_in_catalog	FDFT1	novel	2289	8	NA	NA	1	-7	no_combination_of_known_junctions	FALSE	canonical	1	37425	junction_5	993182.2345029245	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	87	1163	25.0	6	True	AATAAA	-18
PB.5551.2	chr19	-	2097	10	novel_in_catalog	R3HDM4	novel	1815	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	11354	junction_9	430999.57323011727	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	724	1164	5.0	6	True	AATAAA	-16
PB.689.2	chr1	-	2946	20	novel_not_in_catalog	NBPF10	novel	13042	90	NA	NA	-84196	-56028	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	1534.2246997630039	NA	2	NA	TRUE	NA	NA	NA	B	coding	567	1701	1244	2944	60.0	-1	True	AAGAAA	-18
PB.5551.1	chr19	-	1795	8	full-splice_match	R3HDM4	ENST00000361574.9	1815	8	20	0	-7	0	multi-exon	TRUE	canonical	1	433265	junction_7	200635.1290665496	NA	1	1	TRUE	NA	NA	NA	C	coding	268	807	55	861	5.0	7	True	AATAAA	-17
PB.11790.4	chr9	+	3344	19	incomplete-splice_match	GAPVD1	ENST00000495955.5	5309	28	-73	21094	1	0	3prime_fragment	FALSE	canonical	1	2577	junction_2	87215.54053574029	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2979	364	3342	80.0	-31	True	NA	NA
PB.2435.1	chr12	+	2071	4	incomplete-splice_match	LRRC23	ENST00000431207.5	1140	6	1	4215	1	863	3prime_fragment	FALSE	canonical	1	5017	junction_1	63651.740060006734	NA	2	NA	TRUE	NA	NA	NA	A	coding	179	540	453	992	100.0	-9692	False	NA	NA
PB.696.3	chr1	+	2482	14	novel_in_catalog	GPR89B	novel	1934	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	287	junction_8	18426.035474664906	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	151	933	20.0	-64	False	ATTAAA	-14
PB.696.2	chr1	+	2501	14	novel_in_catalog	GPR89B	novel	1934	14	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	287	junction_8	18501.592985630108	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	531	953	20.0	-64	False	ATTAAA	-13
PB.696.5	chr1	+	3397	13	novel_in_catalog	GPR89B	novel	1934	14	NA	NA	0	-3	intron_retention	FALSE	canonical	1	287	junction_8	19186.718116533983	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	525	947	20.0	-58	False	ATTAAA	-12
PB.6809.1	chr2	-	3456	26	full-splice_match	DPP4	ENST00000360534.7	3904	26	445	3	25	-3	multi-exon	TRUE	canonical	1	115188	junction_24	64440.078095371675	NA	0	NA	TRUE	NA	NA	NA	A	coding	766	2301	117	2417	25.0	-7	True	AATAAA	-23
PB.696.7	chr1	+	3367	13	novel_in_catalog	GPR89B	novel	1934	14	NA	NA	8	-5	intron_retention	FALSE	canonical	1	287	junction_8	19100.16165434791	NA	7	NA	TRUE	NA	NA	NA	C	coding	260	783	137	919	20.0	-50	False	ATTAAA	-10
PB.2604.6	chr12	-	3107	11	novel_in_catalog	CERS5	novel	2855	11	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	44737	junction_1	125877.05065980056	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	78	1367	20.0	-6	True	ATTAAA	-12
PB.696.9	chr1	+	1970	15	novel_not_in_catalog	GPR89B	novel	1934	14	NA	NA	-15	-2	any annotated donor/acceptor	FALSE	canonical	1	817	junction_5	2238.8398337130793	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	543	1550	20.0	-1	True	ATTAAA	-13
PB.599.1	chr1	+	1767	9	novel_in_catalog	GSTM4	novel	657	9	NA	NA	9193	449	no_combination_of_known_junctions	FALSE	canonical	1	30715	junction_6	183185.25893477345	NA	0	NA	TRUE	NA	NA	NA	B	coding	151	456	110	565	5.0	-109	False	AGTAAA	-12
PB.2604.5	chr12	-	2120	10	novel_in_catalog	CERS5	novel	2855	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	14256	junction_1	119808.7389845237	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	50	1279	20.0	22	True	ATTAAA	-14
PB.7546.1	chr21	+	3988	11	full-splice_match	PDXK	ENST00000291565.8	7366	11	17	3361	17	2691	multi-exon	FALSE	canonical	1	720644	junction_1	267419.7675753234	NA	2	NA	TRUE	NA	NA	NA	C	coding	312	939	167	1105	15.0	-3	True	AATACA	-20
PB.7048.1	chr2	-	2392	2	novel_not_in_catalog	AC097662.1	novel	2568	14	NA	NA	1	-53990	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.7546.2	chr21	+	7328	11	full-splice_match	PDXK	ENST00000291565.8	7366	11	28	10	28	-10	multi-exon	FALSE	canonical	1	720644	junction_1	267419.7675753234	NA	6	NA	TRUE	NA	NA	NA	C	coding	312	939	156	1094	15.0	8	True	AATAAA	-14
PB.8199.2	chr3	+	2605	5	full-splice_match	HTD2	ENST00000481972.5	1378	5	-67	-1160	-15	1058	multi-exon	FALSE	canonical	1	43937	junction_1	118069.99247692023	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	587	1093	75.0	-15	True	AATACA	-11
PB.2848.1	chr12	-	1823	1	genic	C12orf73	novel	NA	NA	NA	NA	-20	-7602	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	-22	True	GATAAA	-10
PB.2604.3	chr12	-	2123	11	novel_not_in_catalog	CERS5	novel	2855	11	NA	NA	2	1	any annotated donor/acceptor	TRUE	canonical	1	19	junction_1	134031.40766048082	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	61	1239	15.0	11	True	ATTAAA	-16
PB.5249.1	chr17	-	4968	20	full-splice_match	CASKIN2	ENST00000321617.7	5015	20	46	1	46	-1	multi-exon	FALSE	canonical	1	83865	junction_19	25651.165979125442	NA	2	NA	TRUE	NA	NA	NA	A	coding	1202	3609	542	4150	5.0	-13	True	AATGAA	-17
PB.2848.2	chr12	-	1560	1	genic	C12orf73	novel	NA	NA	NA	NA	-21	-7866	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-23	True	NA	NA
PB.11790.5	chr9	+	3258	18	incomplete-splice_match	GAPVD1	ENST00000394105.6	5207	27	-36	21095	2	0	3prime_fragment	FALSE	canonical	1	21691	junction_13	86261.16302971316	NA	0	NA	TRUE	NA	NA	NA	C	coding	1020	3060	197	3256	80.0	-30	True	NA	NA
PB.2604.2	chr12	-	2250	11	novel_not_in_catalog	CERS5	novel	2855	11	NA	NA	2	3	any annotated donor/acceptor	FALSE	canonical	1	1260	junction_10	144826.50433912294	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	499	1500	20.0	9721	False	ATTAAA	-18
PB.4402.1	chr16	+	2639	2	intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2789	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	172	519	1231	1749	80.0	NA	False	NA	NA
PB.4402.3	chr16	+	1942	2	intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2789	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	172	519	1258	1776	35.0	NA	False	NA	NA
PB.4402.2	chr16	+	7533	1	intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	257	774	4215	4988	10.0	NA	False	NA	NA
PB.4402.5	chr16	+	4695	1	intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	257	774	1381	2154	25.0	NA	False	NA	NA
PB.4402.4	chr16	+	2445	2	intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2789	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	172	519	1245	1763	15.0	NA	False	NA	NA
PB.4919.2	chr17	+	2399	2	novel_not_in_catalog	PIGW	novel	876	2	NA	NA	-149	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	B	coding	566	1701	14	1714	30.0	-9629	False	AATAAA	-37
PB.4919.3	chr17	+	3803	1	genic	PIGW	novel	NA	NA	NA	NA	-50	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	504	1515	1598	3112	25.0	-32	True	AATAAA	-43
PB.10985.6	chr8	+	2016	8	full-splice_match	FDFT1	ENST00000220584.8	2176	8	148	12	-7	-7	multi-exon	FALSE	canonical	1	2107054	junction_1	304246.2073588509	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	75	1328	25.0	18	True	AATAAA	-18
PB.461.1	chr1	-	1562	1	antisense	novelGene_MIER1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	8032	False	NA	NA
PB.5604.1	chr19	-	1629	7	full-splice_match	AES	ENST00000327141.8	1608	7	232	-253	-48	1	multi-exon	FALSE	canonical	1	3331915	junction_6	1326416.2148993493	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	126	719	0.0	22	True	AATAAA	-17
PB.5819.2	chr19	+	3775	8	incomplete-splice_match	GTPBP3	ENST00000361619.9	1894	9	1766	-762	0	0	5prime_fragment	FALSE	canonical	1	126177	junction_6	38108.073656860885	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	2272	2748	25.0	0	True	TATAAA	-22
PB.5819.3	chr19	+	1871	9	full-splice_match	GTPBP3	ENST00000324894.12	2579	9	2	706	2	7	multi-exon	FALSE	canonical	1	120481	junction_1	43388.84081459627	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	67	1545	25.0	-25	True	NA	NA
PB.5819.1	chr19	+	3071	8	incomplete-splice_match	GTPBP3	ENST00000361619.9	1894	9	1755	-47	-11	-7	5prime_fragment	FALSE	canonical	1	126177	junction_6	38108.073656860885	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	2283	2759	50.0	-5285	False	NA	NA
PB.5819.6	chr19	+	2659	8	full-splice_match	GTPBP3	ENST00000358792.11	1951	8	0	-708	0	0	multi-exon	FALSE	canonical	1	120481	junction_1	46262.88960376119	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	58	1632	25.0	-16	True	TATAAA	-22
PB.5819.7	chr19	+	2474	9	novel_in_catalog	GTPBP3	novel	1894	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	2093	junction_1	73161.35922130872	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	971	1447	25.0	-15	True	TATAAA	-22
PB.5819.4	chr19	+	1789	9	full-splice_match	GTPBP3	ENST00000600625.5	2493	9	-5	709	-5	-8	multi-exon	FALSE	canonical	1	37008	junction_7	63907.903228004594	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	63	1478	50.0	-21	True	NA	NA
PB.5819.5	chr19	+	2502	9	full-splice_match	GTPBP3	ENST00000600625.5	2493	9	-2	-7	-2	0	multi-exon	FALSE	canonical	1	37008	junction_7	63907.903228004594	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	60	1475	25.0	-18	True	TATAAA	-22
PB.5819.8	chr19	+	2559	9	full-splice_match	GTPBP3	ENST00000324894.12	2579	9	17	3	2	2	multi-exon	FALSE	canonical	1	120481	junction_1	43388.84081459627	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	52	1530	30.0	-10	True	TATAAA	-24
PB.6406.28	chr2	+	2892	9	novel_not_in_catalog	RASGRP3	novel	4738	19	NA	NA	-663	-1	any annotated donor/acceptor	FALSE	canonical	1	2428	junction_1	80468.05743575754	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	36	1025	25.0	539	False	AATAAA	-29
PB.4262.7	chr16	+	2326	7	novel_in_catalog	BFAR	novel	3039	8	NA	NA	-9	-396	combination_of_known_junctions	TRUE	canonical	1	34317	junction_2	190787.49422364897	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	377	1318	85.0	-29	True	NA	NA
PB.112.2	chr1	-	1644	1	genic	FLJ37453	novel	NA	NA	NA	NA	12287	257	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	TATAAA	-15
PB.6406.20	chr2	+	5308	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	421	-922	0	903	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	320	2392	40.0	0	True	TATAAA	-24
PB.2421.1	chr12	-	1381	8	full-splice_match	ING4	ENST00000396807.8	1393	8	14	-2	3	2	multi-exon	FALSE	canonical	1	163294	junction_4	116583.34567867167	NA	1	1	TRUE	NA	NA	NA	A	coding	249	750	26	775	15.0	-8	True	AATAAA	-17
PB.11451.9	chr9	+	1867	8	incomplete-splice_match	UHRF2	ENST00000468435.6	3723	17	79166	5	-4732	-5	5prime_fragment	FALSE	canonical	1	49788	junction_1	132148.24802548115	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	185	997	35.0	-539	False	AATAAA	-15
PB.8326.8	chr3	-	2434	2	incomplete-splice_match	GSK3B	ENST00000650344.1	1957	12	-586	174236	-66	-174236	3prime_fragment	FALSE	canonical	1	384357	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	1050	1511	100.0	1227	False	NA	NA
PB.11039.3	chr8	+	1981	4	full-splice_match	SLC25A37	ENST00000290075.10	1889	4	-92	0	59	0	multi-exon	FALSE	canonical	1	112808	junction_2	390442.02086694853	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	1070	1633	100.0	-9	True	AAGAAA	-23
PB.11039.1	chr8	+	3185	2	full-splice_match	SLC25A37	ENST00000520654.1	3018	2	-190	23	58	-23	multi-exon	FALSE	canonical	1	1053756	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	155	468	141	608	90.0	-10	True	NA	NA
PB.11039.4	chr8	+	3323	3	full-splice_match	SLC25A37	ENST00000518881.5	3404	3	62	19	-24	-1	multi-exon	FALSE	canonical	1	731488	junction_2	161134.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	187	564	2413	2976	95.0	-1	True	AAGAAA	-22
PB.8326.1	chr3	-	2624	11	full-splice_match	GSK3B	ENST00000264235.12	7711	11	-58	5145	-58	218	multi-exon	FALSE	canonical	1	302445	junction_3	42331.65246668266	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	1042	2304	35.0	1235	False	ATTAAA	-20
PB.8326.2	chr3	-	2584	11	full-splice_match	GSK3B	ENST00000264235.12	7711	11	-235	5362	-235	1	multi-exon	FALSE	canonical	1	302445	junction_3	42331.65246668266	NA	4	NA	TRUE	NA	NA	NA	C	coding	420	1263	1219	2481	15.0	1058	False	ATTAAA	-14
PB.8326.3	chr3	-	2455	12	full-splice_match	GSK3B	ENST00000316626.5	1636	12	-811	-8	-60	8	multi-exon	FALSE	canonical	1	31825	junction_4	148326.9266147425	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	1044	2345	20.0	2	True	ATTAAA	-21
PB.8326.4	chr3	-	2301	10	novel_in_catalog	GSK3B	novel	7711	11	NA	NA	-44	8	combination_of_known_junctions	FALSE	canonical	1	21824	junction_1	126097.64390344491	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	1028	2191	20.0	-1	True	ATTAAA	-21
PB.8326.5	chr3	-	2301	10	novel_in_catalog	GSK3B	novel	7711	11	NA	NA	-30	7	no_combination_of_known_junctions	FALSE	canonical	1	873	junction_8	134440.61179385555	NA	2	NA	TRUE	NA	NA	NA	C	coding	392	1179	1014	2192	20.0	-1	True	ATTAAA	-20
PB.8326.6	chr3	-	2112	11	full-splice_match	GSK3B	ENST00000264235.12	7711	11	221	5378	221	0	multi-exon	FALSE	canonical	1	302445	junction_3	42331.65246668266	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	763	2025	65.0	1514	False	NA	NA
PB.8326.7	chr3	-	2606	7	incomplete-splice_match	GSK3B	ENST00000650344.1	1957	12	-550	78268	-30	-78268	3prime_fragment	FALSE	canonical	1	375301	junction_4	22172.493011236544	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	1014	1853	85.0	-1	True	TTTAAA	-33
PB.4262.6	chr16	+	1424	4	full-splice_match	BFAR	ENST00000562442.5	1414	4	-11	1	-10	-1	multi-exon	FALSE	canonical	1	525606	junction_3	67445.65355899518	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	172	813	10.0	-30	True	NA	NA
PB.9995.13	chr6	+	2224	6	full-splice_match	RPL7L1	ENST00000493763.5	4476	6	282	1970	-3	625	multi-exon	FALSE	canonical	1	23424	junction_1	76276.63443125949	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	22	762	20.0	0	True	AATAAA	-22
PB.11757.1	chr9	+	3749	4	full-splice_match	CUTALP	ENST00000640066.1	1970	4	-16	-1763	-16	-19	multi-exon	FALSE	canonical	1	12121	junction_1	29385.9400507567	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	NA	NA
PB.11757.3	chr9	+	5219	4	novel_in_catalog	CUTALP	novel	525	4	NA	NA	-16	-9	combination_of_known_junctions	FALSE	canonical	1	18644	junction_2	24694.994018131598	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	198	515	35.0	0	True	NA	NA
PB.11757.2	chr9	+	3555	3	full-splice_match	CUTALP	ENST00000640391.1	707	3	88	-2936	-16	-9	multi-exon	FALSE	canonical	1	5972	junction_1	35745.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.11757.4	chr9	+	2190	1	novel_in_catalog	CUTALP	novel	525	4	NA	NA	-16	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	198	515	70.0	0	True	AAAAAG	-20
PB.969.8	chr1	+	8432	15	full-splice_match	XPR1	ENST00000367590.8	8474	15	18	24	-10	-24	multi-exon	FALSE	canonical	1	188467	junction_7	36179.713793838695	NA	3	NA	TRUE	NA	NA	NA	C	coding	696	2091	181	2271	15.0	0	True	ACTAAA	-22
PB.8645.2	chr4	+	2684	10	incomplete-splice_match	PIGG	ENST00000453061.6	3218	13	-11	11993	-2	-4	3prime_fragment	FALSE	canonical	1	154533	junction_8	28134.421282281404	NA	2	NA	TRUE	NA	NA	NA	C	coding	754	2265	118	2382	35.0	-21	True	AATAAA	-24
PB.3308.9	chr14	-	2409	5	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	929	any annotated donor/acceptor	FALSE	canonical	1	1274	junction_4	8696.429310354912	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-12
PB.9371.7	chr5	+	5363	28	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	87418.67104328421	NA	2	NA	TRUE	NA	NA	NA	C	coding	1124	3375	416	3790	50.0	-2	True	ATTAAA	-16
PB.4262.1	chr16	+	2020	8	full-splice_match	BFAR	ENST00000261658.6	3039	8	100	919	-16	-33	multi-exon	TRUE	canonical	1	373444	junction_5	108531.21648556573	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	178	1530	65.0	-36	True	AAAACA	-39
PB.9371.6	chr5	+	5630	30	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	95576.03479288143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1185	3558	501	4058	55.0	-28	True	ATTAAA	-15
PB.3308.1	chr14	-	1550	7	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	11440	any annotated donor/acceptor	FALSE	canonical	1	191	junction_1	8035.012205273175	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-22
PB.1227.3	chr1	+	6862	33	full-splice_match	MTR	ENST00000366577.9	10529	33	-20	3687	9	-115	multi-exon	FALSE	canonical	1	99687	junction_1	28097.510881453512	NA	3	NA	TRUE	NA	NA	NA	C	coding	1265	3798	415	4212	55.0	-2	True	NA	NA
PB.3308.3	chr14	-	3702	2	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	1832	intron_retention	FALSE	canonical	1	12288	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.3308.2	chr14	-	3164	4	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	1833	any annotated donor/acceptor	FALSE	canonical	1	12288	junction_3	3354.344976626916	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.3308.5	chr14	-	3131	2	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	1261	intron_retention	FALSE	canonical	1	12288	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	-1	True	NA	NA
PB.3308.4	chr14	-	3033	3	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-724	1832	any annotated donor/acceptor	FALSE	canonical	1	5275	junction_1	3506.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-8	False	NA	NA
PB.3308.7	chr14	-	4151	1	genic	AC244502.1	novel	NA	NA	NA	NA	-732	929	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-16	False	AATAAA	-12
PB.3308.6	chr14	-	2808	2	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	938	intron_retention	FALSE	canonical	1	12288	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-21
PB.9371.4	chr5	+	4143	30	novel_not_in_catalog	PPIP5K2	novel	505	3	NA	NA	9	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_24	105239.78779071837	NA	2	1	TRUE	NA	NA	NA	C	coding	980	2943	501	3443	70.0	-28	True	AATATA	-28
PB.4046.1	chr15	+	3767	3	full-splice_match	ZSCAN2	ENST00000546148.5	2242	3	-11	-1514	-1	5	multi-exon	FALSE	canonical	1	43225	junction_2	11467.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	244	2085	10.0	-12	True	AATAAA	-23
PB.9483.19	chr5	+	4074	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	66	703	-2	215	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	270	2813	45.0	1	True	ATTAAA	-14
PB.4046.2	chr15	+	3769	3	full-splice_match	ZSCAN2	ENST00000448803.6	3813	3	49	-5	4	4	multi-exon	FALSE	canonical	1	21832	junction_1	10696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	247	2088	10.0	-2851	False	AATAAA	-22
PB.9483.17	chr5	+	4804	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	45	-6	13	6	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	291	2834	10.0	13	True	CATAAA	-19
PB.9371.3	chr5	+	5309	28	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	3	-154	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	87418.67104328421	NA	0	NA	TRUE	NA	NA	NA	C	coding	1124	3375	517	3891	35.0	5	True	ATTAAA	-22
PB.9483.15	chr5	+	3301	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	1	2	intron_retention	FALSE	canonical	1	98290	junction_1	1114549.8279520252	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	228	1595	20.0	1	True	NA	NA
PB.9483.14	chr5	+	3795	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	96	952	1	2	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	24	1	TRUE	NA	NA	NA	C	coding	847	2544	240	2783	25.0	1	True	AATAAA	-20
PB.5540.1	chr18	+	1293	7	full-splice_match	RBFA	ENST00000306735.9	1407	7	109	5	1	-5	multi-exon	FALSE	canonical	1	180031	junction_1	76311.12884908872	NA	0	NA	TRUE	NA	NA	NA	A	coding	343	1032	30	1061	70.0	9	True	ATTAAA	-26
PB.9483.12	chr5	+	2735	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	33085	junction_2	1191493.1240154416	NA	10	2	TRUE	NA	NA	NA	C	coding	509	1530	193	1722	25.0	-6	True	AATAAA	-21
PB.9483.11	chr5	+	2997	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	43	1803	11	-92	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	293	2836	60.0	11	True	AATAGA	-29
PB.9371.2	chr5	+	5588	29	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	93679.5881904614	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	522	4016	55.0	0	True	ATTAAA	-15
PB.9094.25	chr4	-	2421	21	full-splice_match	ACSL1	ENST00000281455.6	3832	21	-5	1416	-5	4	multi-exon	FALSE	canonical	1	449852	junction_20	233090.99116149364	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	217	2313	10.0	326	False	AATACA	-23
PB.9371.1	chr5	+	5758	30	novel_not_in_catalog	PPIP5K2	novel	505	3	NA	NA	-5	-4	any annotated donor/acceptor	FALSE	canonical	1	35666	junction_15	104563.1893174203	NA	0	NA	TRUE	NA	NA	NA	C	coding	1221	3666	525	4190	50.0	-3	True	ATTAAA	-11
PB.10607.18	chr7	+	3622	33	incomplete-splice_match	GTF2I	ENST00000614986.4	4415	34	-76	1561	-3	-828	3prime_fragment	FALSE	canonical	1	3722	junction_22	541862.6255438237	NA	1	NA	TRUE	NA	NA	NA	C	coding	978	2937	393	3329	30.0	-4860	False	AATAGA	-20
PB.11062.4	chr8	-	2493	16	full-splice_match	INTS9	ENST00000416984.6	2759	16	264	2	0	-2	multi-exon	FALSE	canonical	1	16110	junction_13	44912.741020585934	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	97	2010	20.0	-43	True	AATAAA	-16
PB.5831.2	chr19	+	5931	28	novel_not_in_catalog	MAST3	novel	5896	27	NA	NA	-21	-7	any annotated donor/acceptor	FALSE	canonical	1	36502	junction_2	46077.575605751044	NA	0	NA	TRUE	NA	NA	NA	B	coding	1316	3951	22	3972	30.0	-6	True	AATAAA	-15
PB.11062.2	chr8	-	2514	17	full-splice_match	INTS9	ENST00000521022.5	2544	17	28	2	-2	-2	multi-exon	TRUE	canonical	1	122604	junction_12	26608.45471602964	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	55	2031	20.0	-1	True	AATAAA	-16
PB.11062.3	chr8	-	2701	17	novel_not_in_catalog	INTS9	novel	2578	17	NA	NA	70	-2	any annotated donor/acceptor	FALSE	canonical	1	3870	junction_9	46724.72947917777	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	1466	2218	20.0	-3	True	AATAAA	-16
PB.9094.23	chr4	-	3664	22	novel_not_in_catalog	ACSL1	novel	3636	20	NA	NA	67	-41	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	332435.6063895356	NA	4	1	TRUE	NA	NA	NA	C	coding	698	2097	85	2181	65.0	0	True	TATAAA	-17
PB.1169.4	chr1	+	1904	13	full-splice_match	PSEN2	ENST00000366783.7	2306	13	22	380	22	31	multi-exon	FALSE	canonical	1	42900	junction_1	46588.284619991464	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	427	1761	20.0	-31	False	AATAAA	-29
PB.4095.8	chr15	+	4264	24	novel_not_in_catalog	MCTP2	novel	1422	10	NA	NA	22	0	any annotated donor/acceptor	FALSE	canonical	1	359	junction_20	45614.13688531287	NA	0	NA	TRUE	NA	NA	NA	B	coding	797	2394	137	2530	10.0	27	True	NA	NA
PB.10092.21	chr6	-	3243	12	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27652	-53344	any annotated donor/acceptor	FALSE	canonical	1	28745	junction_4	378100.5300198471	NA	0	NA	TRUE	NA	NA	NA	B	coding	526	1581	103	1683	30.0	-1	True	AATAAA	-16
PB.4095.1	chr15	+	5894	23	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	-42	1654	combination_of_known_junctions	TRUE	canonical	1	28116	junction_1	36491.13395492275	NA	1	NA	TRUE	NA	NA	NA	B	coding	878	2637	235	2871	35.0	-4911	False	AATATA	-20
PB.4095.3	chr15	+	3922	21	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	-3	-114	combination_of_known_junctions	FALSE	canonical	1	7621	junction_17	42952.367569756854	NA	2	NA	TRUE	NA	NA	NA	B	coding	823	2472	196	2667	50.0	-4872	False	TATAAA	-13
PB.4095.2	chr15	+	3088	18	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	6394	junction_17	45238.17647613366	NA	0	NA	TRUE	NA	NA	NA	B	coding	718	2157	225	2381	20.0	-4901	False	AATAAA	-29
PB.4095.5	chr15	+	7709	23	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	28116	junction_1	36491.13395492275	NA	3	NA	TRUE	NA	NA	NA	B	coding	878	2637	156	2792	40.0	8	True	AATAAA	-17
PB.4095.4	chr15	+	4075	23	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	-9	-98	combination_of_known_junctions	FALSE	canonical	1	28116	junction_1	36491.13395492275	NA	0	NA	TRUE	NA	NA	NA	B	coding	878	2637	168	2804	30.0	-4	True	TATAAA	-29
PB.4262.3	chr16	+	2696	8	full-splice_match	BFAR	ENST00000261658.6	3039	8	113	230	-3	-225	multi-exon	FALSE	canonical	1	373444	junction_5	108531.21648556573	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	165	1517	20.0	-23	True	TATAAA	-15
PB.4095.6	chr15	+	4157	24	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	4	-113	combination_of_known_junctions	FALSE	canonical	1	9452	junction_1	41607.6945987889	NA	0	NA	TRUE	NA	NA	NA	B	coding	878	2637	265	2901	50.0	9	True	TATAAA	-14
PB.6439.1	chr2	-	3681	2	full-splice_match	ZFP36L2	ENST00000282388.3	3696	2	4	11	4	-11	multi-exon	FALSE	canonical	1	1391137	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	291	1775	55.0	-2	True	AATAAA	-10
PB.6439.3	chr2	-	2929	3	novel_not_in_catalog	ZFP36L2	novel	3696	2	NA	NA	3	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	695568.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	292	1266	55.0	-3	True	AATAAA	-10
PB.2191.1	chr11	+	4219	11	full-splice_match	USP35	ENST00000529308.5	4216	11	-12	9	-8	-5	multi-exon	FALSE	canonical	1	35297	junction_1	22447.11941786741	NA	1	NA	TRUE	NA	NA	NA	A	coding	1018	3057	274	3330	30.0	-43	True	AATAAA	-13
PB.6439.5	chr2	-	3207	3	novel_not_in_catalog	ZFP36L2	novel	3696	2	NA	NA	4	-12	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	695568.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	314	945	291	1235	55.0	-2	True	AATAAA	-9
PB.6439.4	chr2	-	2890	3	novel_not_in_catalog	ZFP36L2	novel	3696	2	NA	NA	3	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	695568.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	292	1227	55.0	-3	True	AATAAA	-10
PB.6439.7	chr2	-	1883	2	full-splice_match	ZFP36L2	ENST00000282388.3	3696	2	204	1609	204	-1609	multi-exon	FALSE	canonical	1	1391137	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	494	1485	91	1575	90.0	1295	False	NA	NA
PB.10607.19	chr7	+	3575	31	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	542393.8183449416	NA	12	1	TRUE	NA	NA	NA	C	coding	530	1593	1554	3146	75.0	-4860	False	AAGAAA	-40
PB.6439.9	chr2	-	1611	3	novel_not_in_catalog	ZFP36L2	novel	3696	2	NA	NA	3	-1609	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	695568.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	292	1236	90.0	-3	True	NA	NA
PB.6439.8	chr2	-	1921	3	novel_not_in_catalog	ZFP36L2	novel	3696	2	NA	NA	5	-1609	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	695568.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	494	1485	129	1613	90.0	-1	True	NA	NA
PB.225.1	chr1	+	1302	4	novel_not_in_catalog	MED18	novel	862	3	NA	NA	16	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	96279.98253819719	NA	0	NA	TRUE	NA	NA	NA	A	coding	208	627	230	856	25.0	-48	True	AATAAA	-13
PB.10092.20	chr6	-	3364	13	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27794	-53345	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	354781.7401338306	NA	1	NA	TRUE	NA	NA	NA	B	coding	562	1689	245	1933	30.0	1046	False	AATAAA	-15
PB.8645.5	chr4	+	6238	1	novel_in_catalog	PIGG	novel	1784	9	NA	NA	1	-2079	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-18	True	NA	NA
PB.852.10	chr1	-	4506	32	novel_in_catalog	COPA	novel	5175	32	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	6033	junction_14	392152.13573037693	NA	2	NA	TRUE	NA	NA	NA	C	coding	1175	3528	96	3623	15.0	-19	True	AATAAA	-20
PB.11190.2	chr8	+	3637	6	full-splice_match	GDAP1	ENST00000220822.11	3666	6	21	8	-15	-8	multi-exon	FALSE	canonical	1	127699	junction_1	20241.221755615446	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	60	1136	45.0	-43	True	AATAAA	-28
PB.6580.8	chr2	-	1700	3	novel_in_catalog	EVA1A	novel	589	4	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	18612	junction_2	44684.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	325	783	5.0	0	True	AATAAA	-16
PB.4586.18	chr16	+	2821	13	novel_in_catalog	USP10	novel	3009	14	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	1	13024	junction_11	177176.67922224477	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	89	2221	80.0	3	True	GATAAA	-39
PB.4586.19	chr16	+	3175	13	novel_in_catalog	USP10	novel	3009	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	13024	junction_11	177176.67922224477	NA	2	NA	TRUE	NA	NA	NA	C	coding	710	2133	88	2220	15.0	4	True	AATAAA	-17
PB.33.1	chr1	-	725	4	full-splice_match	FAAP20	ENST00000378546.8	729	4	1	3	1	-3	multi-exon	FALSE	canonical	1	217459	junction_3	265187.43704825506	NA	0	NA	TRUE	NA	NA	NA	A	coding	180	543	25	567	15.0	-2	True	ATTAAA	-37
PB.7071.8	chr2	+	2183	7	full-splice_match	COPS7B	ENST00000350033.7	2544	7	31	330	0	159	multi-exon	FALSE	canonical	1	252632	junction_1	88696.93666528487	NA	2	NA	TRUE	NA	NA	NA	C	coding	264	795	111	905	5.0	0	True	AATAAA	-18
PB.8960.1	chr4	-	2245	13	full-splice_match	TNIP3	ENST00000509841.1	1575	13	-11	-659	-11	-216	multi-exon	FALSE	canonical	1	5760	junction_12	20449.75311111495	NA	1	NA	TRUE	NA	NA	NA	A	coding	376	1131	91	1221	100.0	5	True	NA	NA
PB.4586.12	chr16	+	2258	12	novel_not_in_catalog	USP10	novel	3009	14	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	195219.29671703617	NA	1	1	TRUE	NA	NA	NA	C	coding	470	1413	9	1421	15.0	0	True	AATAAA	-18
PB.4586.13	chr16	+	3314	14	full-splice_match	USP10	ENST00000219473.11	3009	14	33	-338	3	-3	multi-exon	FALSE	canonical	1	53900	junction_12	171164.41693945866	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	81	2477	15.0	11	True	AATAAA	-18
PB.4586.10	chr16	+	1876	4	incomplete-splice_match	USP10	ENST00000219473.11	3009	14	18	33319	1	1051	3prime_fragment	FALSE	canonical	1	120096	junction_2	41101.497404460686	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	96	1313	30.0	-4	True	AATAAA	-14
PB.4586.11	chr16	+	3264	13	novel_in_catalog	USP10	novel	3009	14	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	20579	junction_2	186656.42898845518	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	628	2427	15.0	0	True	AATAAA	-18
PB.4586.16	chr16	+	2222	12	full-splice_match	USP10	ENST00000563048.5	1315	12	-3	-904	-1	-3	multi-exon	FALSE	canonical	1	23103	junction_2	178960.82573130284	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	303	1385	15.0	1	True	AATAAA	-18
PB.4586.17	chr16	+	2756	12	novel_in_catalog	USP10	novel	3009	14	NA	NA	0	-18	no_combination_of_known_junctions	FALSE	canonical	1	4229	junction_11	181312.2585677141	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	90	2156	80.0	2	True	GATAAA	-39
PB.4586.14	chr16	+	3089	15	full-splice_match	USP10	ENST00000570191.5	2717	15	-3	-369	-1	-18	multi-exon	FALSE	canonical	1	7552	junction_2	188151.72794529688	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	200	2608	80.0	1	True	GATAAA	-39
PB.4586.15	chr16	+	2902	13	novel_in_catalog	USP10	novel	3009	14	NA	NA	-1	-18	combination_of_known_junctions	FALSE	canonical	1	8460	junction_12	179377.25529691373	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	91	2421	80.0	1	True	GATAAA	-39
PB.10417.1	chr7	+	2354	1	full-splice_match	AC080080.1	ENST00000625121.1	2420	1	60	6	60	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-35	True	ATTAAA	-8
PB.10417.2	chr7	+	2299	1	full-splice_match	AC080080.1	ENST00000625121.1	2420	1	49	72	49	-72	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-46	True	NA	NA
PB.11648.2	chr9	-	2857	13	full-splice_match	IPPK	ENST00000287996.7	4401	13	169	1375	169	-3	multi-exon	FALSE	canonical	1	63242	junction_4	34432.770804940395	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	109	1584	30.0	-1	True	NA	NA
PB.10993.10	chr8	-	2885	6	full-splice_match	CNOT7	ENST00000523917.5	1885	6	19	-1019	-2	17	multi-exon	FALSE	canonical	1	28667	junction_5	197293.3401629158	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	281	1015	90.0	-3	True	NA	NA
PB.1216.3	chr1	+	1720	17	full-splice_match	TBCE	ENST00000642610.1	5441	17	70	3651	0	1	multi-exon	FALSE	canonical	1	181053	junction_7	78484.0267510689	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	107	1690	5.0	0	True	AATAAA	-16
PB.1216.2	chr1	+	1894	17	full-splice_match	TBCE	ENST00000642610.1	5441	17	69	3478	-1	-1	multi-exon	FALSE	canonical	1	181053	junction_7	78484.0267510689	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	108	1691	25.0	-1	True	AATAAA	-15
PB.1216.1	chr1	+	1713	15	full-splice_match	TBCE	ENST00000366601.8	1683	15	-10	-20	0	1	multi-exon	FALSE	canonical	1	5475	junction_4	105620.55020405907	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	117	1511	25.0	-10	True	AATAAA	-14
PB.11018.5	chr8	+	4330	8	full-splice_match	POLR3D	ENST00000397802.8	5494	8	185	979	-12	-979	multi-exon	FALSE	canonical	1	173734	junction_3	86321.55188430226	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	31	1227	25.0	-12	True	ACTAAA	-17
PB.127.13	chr1	-	185	1	incomplete-splice_match	RCC2	ENST00000375436.8	4087	13	32753	27	2075	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	5303	False	AGTAAA	-7
PB.7079.17	chr2	+	3303	6	incomplete-splice_match	DGKD	ENST00000430834.1	5379	23	24033	7	-1468	1	5prime_fragment	FALSE	canonical	1	239635	junction_4	35787.12598351536	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	34	666	20.0	NA	False	AATAAA	-23
PB.11018.3	chr8	+	5114	8	full-splice_match	POLR3D	ENST00000397802.8	5494	8	134	246	-63	-246	multi-exon	FALSE	canonical	1	173734	junction_3	86321.55188430226	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	82	1278	35.0	-63	False	TATAAA	-20
PB.11018.2	chr8	+	1926	8	full-splice_match	POLR3D	ENST00000397802.8	5494	8	134	3434	-63	-1	multi-exon	FALSE	canonical	1	173734	junction_3	86321.55188430226	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	82	1278	30.0	-63	False	NA	NA
PB.1375.3	chr10	+	4447	3	novel_in_catalog	LINC00839	novel	2253	5	NA	NA	-3	-861	intron_retention	FALSE	canonical	1	30137	junction_1	6925.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	201	606	2	607	10.0	-7	True	NA	NA
PB.1375.2	chr10	+	2832	4	novel_in_catalog	LINC00839	novel	2253	5	NA	NA	-5	-806	intron_retention	FALSE	canonical	1	30137	junction_1	5960.963587280909	NA	5	NA	TRUE	NA	NA	NA	B	coding	202	609	1	609	5.0	-9	True	NA	NA
PB.1375.1	chr10	+	3035	4	incomplete-splice_match	LINC00839	ENST00000429940.6	2253	5	83	807	-2	-807	intron_retention	FALSE	canonical	1	26377	junction_1	7572.407513833072	NA	0	NA	TRUE	NA	NA	NA	B	coding	166	501	14	514	5.0	0	True	NA	NA
PB.852.18	chr1	-	4570	33	full-splice_match	COPA	ENST00000241704.7	4789	33	135	84	-6	-3	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	2	NA	TRUE	NA	NA	NA	C	coding	1224	3675	96	3770	20.0	-19	True	NA	NA
PB.2240.9	chr11	-	2682	10	novel_in_catalog	CCDC82	novel	2941	9	NA	NA	35	25	intron_retention	FALSE	canonical	1	10478	junction_9	89691.55799959693	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	627	2261	20.0	92	False	ATTAAA	-17
PB.8645.7	chr4	+	2583	8	incomplete-splice_match	PIGG	ENST00000506402.5	2387	9	-36	-5	1	0	intron_retention	FALSE	canonical	1	35001	junction_7	63303.02009818347	NA	4	1	TRUE	NA	NA	NA	C	coding	463	1392	115	1506	15.0	-18	True	AATAAA	-20
PB.120.4	chr1	+	1955	7	full-splice_match	NECAP2	ENST00000443980.6	1929	7	-21	-5	-6	4	multi-exon	FALSE	canonical	1	21086	junction_6	329645.6102670462	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	48	869	35.0	-27	True	AATAAA	-22
PB.11256.8	chr8	+	2628	12	full-splice_match	MTDH	ENST00000336273.7	6177	12	-5	3554	-5	-27	multi-exon	FALSE	canonical	1	758764	junction_1	215577.21031858586	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	334	2082	25.0	-10	True	AATAAA	-25
PB.6575.2	chr2	+	2361	3	incomplete-splice_match	DOK1	ENST00000340004.6	1722	4	-5	5	-5	-5	intron_retention	FALSE	canonical	1	121350	junction_1	64861.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	1126	1929	35.0	-24	True	ATTAAA	-15
PB.6401.1	chr2	+	4369	17	full-splice_match	SPAST	ENST00000315285.8	5277	17	1	907	1	-752	multi-exon	FALSE	canonical	1	107912	junction_1	32003.845547193134	NA	3	NA	TRUE	NA	NA	NA	C	coding	530	1593	543	2135	35.0	-27	True	ATTAAA	-28
PB.11256.1	chr8	+	4359	12	full-splice_match	MTDH	ENST00000336273.7	6177	12	-42	1860	-42	1667	multi-exon	TRUE	canonical	1	758764	junction_1	215577.21031858586	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	371	2119	85.0	-47	True	NA	NA
PB.11256.3	chr8	+	3641	11	novel_in_catalog	MTDH	novel	6177	12	NA	NA	-24	1069	no_combination_of_known_junctions	FALSE	canonical	1	8428	junction_1	398081.53697608237	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	353	1999	20.0	-29	True	AATAAA	-12
PB.11256.2	chr8	+	1786	10	novel_not_in_catalog	MTDH	novel	6177	12	NA	NA	-42	-5372	any annotated donor/acceptor	FALSE	canonical	1	28638	junction_7	465249.29263650195	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1416	371	1786	90.0	-47	True	GATAAA	-37
PB.11256.5	chr8	+	1917	11	novel_in_catalog	MTDH	novel	6177	12	NA	NA	-23	11	combination_of_known_junctions	FALSE	canonical	1	46678	junction_9	377771.99500884133	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1566	352	1917	80.0	-28	True	NA	NA
PB.11256.4	chr8	+	3645	11	full-splice_match	MTDH	ENST00000519934.5	2184	11	-391	-1070	-24	1070	multi-exon	FALSE	canonical	1	174118	junction_6	370084.3895243354	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	353	2002	20.0	-29	True	AATAAA	-13
PB.11256.7	chr8	+	3143	12	full-splice_match	MTDH	ENST00000336273.7	6177	12	577	2457	-37	1070	multi-exon	FALSE	canonical	1	758764	junction_1	215577.21031858586	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	1	1500	20.0	279	False	AATAAA	-13
PB.11256.6	chr8	+	1569	9	incomplete-splice_match	MTDH	ENST00000336273.7	6177	12	85	15055	85	-5372	3prime_fragment	FALSE	canonical	1	758764	junction_1	192388.447551716	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1326	244	1569	90.0	-213	False	GATAAA	-37
PB.2935.8	chr12	-	2726	11	novel_in_catalog	FBXO21	novel	6040	12	NA	NA	-23	-38	intron_retention	FALSE	canonical	1	5269	junction_4	104253.71929868977	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	39	1745	75.0	-25	True	NA	NA
PB.11286.11	chr8	+	3075	8	novel_in_catalog	FZD6	novel	3719	7	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	2015	junction_4	122826.16479398841	NA	3	NA	TRUE	NA	NA	NA	C	coding	362	1089	635	1723	35.0	-21	True	AATAAA	-14
PB.2935.1	chr12	-	4220	12	full-splice_match	FBXO21	ENST00000622495.4	6040	12	31	1789	-29	4	multi-exon	FALSE	canonical	1	197632	junction_5	43159.77085796908	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	45	1910	25.0	29	False	AATAAA	-26
PB.2935.2	chr12	-	4208	12	full-splice_match	FBXO21	ENST00000330622.9	2906	12	-15	-1287	0	0	multi-exon	FALSE	canonical	1	105997	junction_3	66996.12680811672	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	16	1902	30.0	-2	True	AATAAA	-22
PB.2935.3	chr12	-	4041	12	full-splice_match	FBXO21	ENST00000330622.9	2906	12	-15	-1120	0	-167	multi-exon	FALSE	canonical	1	105997	junction_3	66996.12680811672	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	16	1902	40.0	-2	True	AATAAA	-18
PB.2935.4	chr12	-	4018	12	full-splice_match	FBXO21	ENST00000622495.4	6040	12	60	1962	0	-169	multi-exon	FALSE	canonical	1	197632	junction_5	43159.77085796908	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	16	1881	45.0	-2	True	AATAAA	-16
PB.2935.5	chr12	-	2892	12	full-splice_match	FBXO21	ENST00000330622.9	2906	12	-24	38	-9	-38	multi-exon	FALSE	canonical	1	105997	junction_3	66996.12680811672	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	25	1911	75.0	-11	True	NA	NA
PB.2935.6	chr12	-	2920	12	full-splice_match	FBXO21	ENST00000622495.4	6040	12	2	3118	2	-38	multi-exon	FALSE	canonical	1	197632	junction_5	43159.77085796908	NA	75	5	TRUE	NA	NA	NA	C	coding	621	1866	74	1939	75.0	0	True	NA	NA
PB.2935.7	chr12	-	2875	12	novel_not_in_catalog	FBXO21	novel	6040	12	NA	NA	0	-38	intron_retention	FALSE	non_canonical	0	0	junction_3	93325.92518429234	NA	1	1	TRUE	NA	NA	NA	C	coding	448	1347	16	1362	75.0	-2	True	NA	NA
PB.847.5	chr1	-	2181	7	full-splice_match	IGSF8	ENST00000368086.5	2366	7	177	8	177	2	multi-exon	FALSE	canonical	1	45639	junction_1	183943.32072226307	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	41	1882	30.0	-24	True	AATAAA	-11
PB.847.4	chr1	-	3214	5	novel_in_catalog	IGSF8	novel	2343	7	NA	NA	46	2	intron_retention	FALSE	canonical	1	202935	junction_4	185199.75474808275	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	1388	2323	30.0	227	False	AATAAA	-11
PB.847.6	chr1	-	2233	8	novel_not_in_catalog	IGSF8	novel	2343	7	NA	NA	42	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	220158.7087884278	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	176	2017	30.0	223	False	AATAAA	-11
PB.8431.3	chr3	+	2977	1	novel_in_catalog	AC097103.2	novel	602	3	NA	NA	7063	-23134	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	7094	False	NA	NA
PB.1497.2	chr10	-	4442	6	full-splice_match	NUTM2B-AS1	ENST00000483080.5	864	6	-101	-3477	9	134	multi-exon	FALSE	canonical	1	29617	junction_1	60549.111253593146	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-40	False	AATAAA	-14
PB.8431.1	chr3	+	2359	5	novel_not_in_catalog	AC097103.2	novel	602	3	NA	NA	-18	43443	any annotated donor/acceptor	FALSE	canonical	1	2253	junction_4	6966.204364645068	NA	0	NA	TRUE	NA	NA	NA	B	coding	172	519	831	1349	85.0	-48	False	AATAAA	-13
PB.847.2	chr1	-	2490	6	novel_in_catalog	IGSF8	novel	2343	7	NA	NA	77	-4	intron_retention	FALSE	canonical	1	202935	junction_5	167650.4972451916	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	141	1595	10.0	6	True	AATAAA	-15
PB.2896.1	chr12	-	894	7	full-splice_match	ARPC3	ENST00000228825.11	1014	7	48	72	-48	13	multi-exon	FALSE	canonical	1	549115	junction_2	911693.647435807	NA	0	NA	TRUE	NA	NA	NA	A	coding	178	537	100	636	40.0	-35	True	AATAAA	-23
PB.2896.2	chr12	-	1638	5	novel_in_catalog	AC144548.1	novel	946	5	NA	NA	-4809	-47440	intron_retention	FALSE	canonical	1	594975	junction_2	938005.8649527131	NA	1	NA	TRUE	NA	NA	NA	A	coding	25	78	225	302	40.0	-33	True	AATAAA	-17
PB.2352.8	chr11	+	1687	11	novel_in_catalog	EI24	novel	2455	11	NA	NA	2	-14	combination_of_known_junctions	FALSE	canonical	1	1683	junction_2	338592.1899392247	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	639	1142	95.0	2	True	NA	NA
PB.10970.1	chr8	+	3244	8	novel_not_in_catalog	AGPAT5	novel	3685	8	NA	NA	-1894	-4	any annotated donor/acceptor	FALSE	canonical	1	804	junction_1	162782.81930704796	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	329	970	20.0	-2230	False	AATAAA	-16
PB.9964.16	chr6	-	3084	2	incomplete-splice_match	MTCH1	ENST00000460219.2	1572	11	-37	9433	-37	-8843	3prime_fragment	FALSE	canonical	1	1881294	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	903	1289	100.0	-16	True	AGTAAA	-12
PB.9964.15	chr6	-	2895	10	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-36	-4	intron_retention	FALSE	canonical	1	32272	junction_9	681866.3538500528	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	372	1187	5.0	-15	True	AATAAA	-14
PB.9964.14	chr6	-	3132	10	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-64	-2	intron_retention	FALSE	canonical	1	859014	junction_2	476902.7206681582	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	209	994	5.0	-43	False	AATAAA	-16
PB.9964.13	chr6	-	1819	11	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-21	-1	no_combination_of_known_junctions	FALSE	canonical	1	32272	junction_10	654820.126422394	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	357	1058	5.0	0	True	AATAAA	-17
PB.9964.12	chr6	-	1860	12	full-splice_match	MTCH1	ENST00000373616.9	2006	12	145	1	-28	-1	multi-exon	FALSE	canonical	1	859014	junction_4	457805.3524037308	NA	15	1	TRUE	NA	NA	NA	C	coding	308	927	173	1099	5.0	-7	True	AATAAA	-17
PB.9964.11	chr6	-	1898	12	novel_not_in_catalog	MTCH1	novel	2006	12	NA	NA	-52	-1	any annotated donor/acceptor	FALSE	canonical	1	1593	junction_3	618602.4474108773	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	197	979	5.0	-31	True	AATAAA	-17
PB.9964.10	chr6	-	2254	11	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-36	-1	intron_retention	FALSE	canonical	1	859014	junction_4	460936.7946722848	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	978	1493	5.0	-15	True	AATAAA	-17
PB.969.7	chr1	+	3832	11	incomplete-splice_match	XPR1	ENST00000367590.8	8474	15	18	51384	-10	-35188	3prime_fragment	FALSE	canonical	1	188467	junction_7	38012.81800077442	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	181	1692	25.0	0	True	NA	NA
PB.1155.6	chr1	-	3705	13	novel_in_catalog	LBR	novel	3745	14	NA	NA	-41	0	no_combination_of_known_junctions	FALSE	canonical	1	8066	junction_2	232016.31790146907	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	138	1904	5.0	744	False	AATAAA	-21
PB.1155.5	chr1	-	3828	14	full-splice_match	LBR	ENST00000338179.6	3812	14	-15	-1	-15	0	multi-exon	FALSE	canonical	1	8329	junction_13	217181.63073490944	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	180	2027	5.0	-50	False	AATAAA	-21
PB.1155.4	chr1	-	3556	12	novel_in_catalog	LBR	novel	3745	14	NA	NA	-40	1	no_combination_of_known_junctions	FALSE	canonical	1	3469	junction_4	226487.99427393806	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	137	1348	5.0	-38	True	AATAAA	-22
PB.120.6	chr1	+	1879	8	novel_not_in_catalog	NECAP2	novel	2070	8	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	295715.7321254481	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	59	691	35.0	-18	True	AATAAA	-18
PB.9236.7	chr5	-	4669	1	intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-1	True	TATAAA	-41
PB.1155.1	chr1	-	3726	14	novel_not_in_catalog	LBR	novel	3745	14	NA	NA	-70	11	any annotated donor/acceptor	FALSE	canonical	1	371	junction_3	228949.68356772914	NA	4	1	TRUE	NA	NA	NA	C	coding	465	1398	167	1564	0.0	715	False	AATAAA	-32
PB.4680.9	chr17	-	2428	6	full-splice_match	UBE2G1	ENST00000396981.6	3974	6	-28	1574	-28	1147	multi-exon	FALSE	canonical	1	499122	junction_5	170247.27137361118	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	195	707	35.0	7	True	AATAAA	-14
PB.11366.1	chr8	+	2132	3	novel_in_catalog	THEM6	novel	2259	2	NA	NA	10	0	intron_retention	FALSE	canonical	1	303	junction_2	94690.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	135	761	5.0	-10	True	ATTAAA	-16
PB.10067.33	chr6	+	5482	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-49	-1065	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	154944.30375017854	NA	1	1	TRUE	NA	NA	NA	C	coding	1111	3336	528	3863	40.0	1	True	AATAAA	-9
PB.1663.2	chr10	-	3291	19	full-splice_match	AFAP1L2	ENST00000304129.8	3705	19	-10	424	-7	-422	multi-exon	FALSE	canonical	1	61963	junction_18	30864.920234170837	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	41	2497	35.0	1	True	ATTAAA	-19
PB.9236.1	chr5	-	2323	4	intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	28	junction_1	458.6228176714378	NA	12	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.11625.4	chr9	-	2842	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	221	1612	15.0	-17	True	AATAAA	-21
PB.3161.14	chr13	-	2500	10	incomplete-splice_match	RCBTB2	ENST00000344532.7	3232	15	102	20418	49	2755	3prime_fragment	FALSE	canonical	1	32639	junction_9	41710.26413512893	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	323	1252	50.0	2763	False	AATAAA	-11
PB.8749.5	chr4	+	9805	19	full-splice_match	N4BP2	ENST00000511480.5	9747	19	-58	0	29	0	multi-exon	FALSE	canonical	1	11141	junction_3	40218.8224088003	NA	2	NA	TRUE	NA	NA	NA	C	coding	1690	5073	719	5791	30.0	5	True	AATAAA	-14
PB.2262.24	chr11	+	1536	12	full-splice_match	ACAT1	ENST00000265838.8	1761	12	48	177	-3	11	multi-exon	FALSE	canonical	1	596296	junction_1	249617.76598780745	NA	2	NA	TRUE	NA	NA	NA	C	coding	427	1284	44	1327	35.0	-3	True	AATAAA	-33
PB.2262.25	chr11	+	1629	13	novel_in_catalog	ACAT1	novel	1761	12	NA	NA	-2	11	no_combination_of_known_junctions	FALSE	canonical	1	5978	junction_2	464248.4834340394	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	407	1420	35.0	-2	True	AATAAA	-33
PB.2262.23	chr11	+	2452	12	full-splice_match	ACAT1	ENST00000265838.8	1761	12	5	-696	5	696	multi-exon	FALSE	canonical	1	596296	junction_1	249617.76598780745	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	87	1370	40.0	-280	False	NA	NA
PB.120.1	chr1	+	2151	9	full-splice_match	NECAP2	ENST00000459640.5	981	9	-49	-1121	-14	0	multi-exon	FALSE	canonical	1	7089	junction_5	342968.2573340425	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	56	640	40.0	-35	True	AATAAA	-17
PB.9236.2	chr5	-	4246	3	intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	227	junction_2	429.0	NA	5	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.5930.1	chr19	+	1666	2	full-splice_match	FFAR2	ENST00000599180.2	2133	2	-81	548	-81	-237	multi-exon	FALSE	canonical	1	21756	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	330	993	162	1154	95.0	-9182	False	NA	NA
PB.3095.1	chr13	-	3971	1	novel_in_catalog	FRY-AS1	novel	1115	4	NA	NA	2351	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	16	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.11190.3	chr8	+	2876	6	full-splice_match	GDAP1	ENST00000220822.11	3666	6	21	769	-15	-769	multi-exon	FALSE	canonical	1	127699	junction_1	20241.221755615446	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	60	1136	30.0	-43	True	AATAAA	-19
PB.6737.2	chr2	-	3898	20	novel_in_catalog	SMPD4	novel	3614	17	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	1833	junction_9	204037.1747124458	NA	1	NA	TRUE	NA	NA	NA	C	coding	912	2739	12	2750	10.0	-17	True	AATAAA	-19
PB.333.9	chr1	+	2798	19	full-splice_match	CTPS1	ENST00000650070.1	2838	19	33	7	8	2	multi-exon	FALSE	canonical	1	320551	junction_1	146532.54578681636	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	115	1890	35.0	-8855	False	NA	NA
PB.8425.1	chr3	+	2671	22	full-splice_match	ARMC8	ENST00000469044.5	4790	22	247	1872	0	-24	multi-exon	FALSE	canonical	1	148153	junction_13	97498.96143813399	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	25	2046	30.0	0	True	AGTAAA	-24
PB.8425.2	chr3	+	2844	21	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	12023	junction_5	117163.58129789094	NA	12	1	TRUE	NA	NA	NA	C	coding	600	1803	398	2200	80.0	-18	True	AGTAAA	-43
PB.8425.3	chr3	+	2726	21	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	2	27	intron_retention	FALSE	canonical	1	55065	junction_1	106522.6366480266	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	302	2197	65.0	2	True	TATAAA	-44
PB.8425.4	chr3	+	2577	22	full-splice_match	ARMC8	ENST00000469044.5	4790	22	245	1968	0	27	multi-exon	FALSE	canonical	1	148153	junction_13	97498.96143813399	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	27	2048	65.0	-2	True	TATAAA	-44
PB.8425.5	chr3	+	2934	13	full-splice_match	ARMC8	ENST00000471453.5	2910	13	0	-24	0	-6	multi-exon	FALSE	canonical	1	108376	junction_2	109183.31857540735	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	145	1302	20.0	-2	True	AATAAA	-18
PB.8425.6	chr3	+	2632	21	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	55065	junction_1	106522.6366480266	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	88	1983	90.0	-14	True	AATATA	-41
PB.8425.7	chr3	+	2873	12	novel_not_in_catalog	ARMC8	novel	4728	21	NA	NA	1	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	124652.04455954999	NA	7	1	TRUE	NA	NA	NA	C	coding	357	1074	168	1241	20.0	-13	True	AATAAA	-18
PB.8425.8	chr3	+	2692	23	full-splice_match	ARMC8	ENST00000481646.5	3043	23	271	80	7	-72	multi-exon	FALSE	canonical	1	108376	junction_2	100272.31593594029	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	136	2115	35.0	7	True	CATAAA	-17
PB.8425.9	chr3	+	2698	12	full-splice_match	ARMC8	ENST00000470821.5	1656	12	-6	-1036	-3	-140	multi-exon	FALSE	canonical	1	152200	junction_1	95819.58200451858	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	31	1230	30.0	-6	True	AATAAA	-13
PB.11366.3	chr8	+	2044	2	novel_not_in_catalog	THEM6	novel	2259	2	NA	NA	53	-1	intron_retention	FALSE	canonical	1	10560	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	92	559	15.0	-18	True	ATTAAA	-13
PB.152.10	chr1	-	6581	13	novel_in_catalog	USP48	novel	4309	26	NA	NA	25	0	intron_retention	FALSE	canonical	1	354577	junction_12	86486.5957107741	NA	5	NA	TRUE	NA	NA	NA	C	coding	485	1458	214	1671	35.0	-22	True	AATAAA	-2
PB.152.12	chr1	-	2101	14	incomplete-splice_match	USP48	ENST00000400301.5	4309	26	23	42746	23	-8	3prime_fragment	FALSE	canonical	1	336773	junction_3	88340.73886757251	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1884	216	2099	55.0	-24	True	NA	NA
PB.5637.3	chr19	-	2680	20	novel_in_catalog	SAFB2	novel	3371	21	NA	NA	-21	3	combination_of_known_junctions	FALSE	canonical	1	33601	junction_14	172388.74107159468	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	934	2433	10.0	-22	True	AATAAA	-18
PB.152.14	chr1	-	1906	13	novel_in_catalog	USP48	novel	4309	26	NA	NA	25	0	intron_retention	FALSE	canonical	1	14147	junction_2	166961.12403397236	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1692	214	1905	35.0	-22	True	AATAAA	-2
PB.152.15	chr1	-	1906	13	novel_in_catalog	USP48	novel	4309	26	NA	NA	46	0	intron_retention	FALSE	canonical	1	2147	junction_5	152431.00297245145	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1713	193	1905	35.0	-1	True	AATAAA	-2
PB.152.16	chr1	-	1793	12	novel_not_in_catalog	USP48	novel	4309	26	NA	NA	27	0	intron_retention	FALSE	canonical	1	3465	junction_1	184831.7331990245	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	212	1792	35.0	-20	True	AATAAA	-2
PB.152.17	chr1	-	5400	11	full-splice_match	USP48	ENST00000421625.6	2818	11	452	-3034	41	-845	multi-exon	FALSE	canonical	1	354577	junction_10	93328.48502600908	NA	4	NA	TRUE	NA	NA	NA	C	coding	485	1458	198	1655	10.0	-6	True	ATTAAA	-18
PB.152.18	chr1	-	3868	11	full-splice_match	USP48	ENST00000421625.6	2818	11	436	-1486	25	1486	multi-exon	FALSE	canonical	1	354577	junction_10	93328.48502600908	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	214	1671	65.0	-22	True	ATTAAA	-18
PB.152.19	chr1	-	3162	11	full-splice_match	USP48	ENST00000421625.6	2818	11	451	-795	40	795	multi-exon	FALSE	canonical	1	354577	junction_10	93328.48502600908	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	199	1656	25.0	-7	True	AATATA	-19
PB.3396.14	chr14	-	1851	5	novel_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	5	772	combination_of_known_junctions	FALSE	canonical	1	36552	junction_3	92878.91788506151	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-56	True	NA	NA
PB.3396.12	chr14	-	1899	6	full-splice_match	TRAPPC6B	ENST00000330149.9	3242	6	-63	1406	8	772	multi-exon	FALSE	canonical	1	220549	junction_1	18989.25201265179	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	330	767	75.0	-53	True	NA	NA
PB.3396.13	chr14	-	1819	5	full-splice_match	TRAPPC6B	ENST00000347691.9	3229	5	4	1406	4	772	multi-exon	FALSE	canonical	1	61555	junction_2	73219.39524256876	NA	4	NA	TRUE	NA	NA	NA	C	coding	117	354	334	687	75.0	-57	True	NA	NA
PB.3396.10	chr14	-	2019	7	novel_not_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	11	772	any annotated donor/acceptor	FALSE	canonical	1	2022	junction_6	111488.91612024339	NA	1	1	TRUE	NA	NA	NA	C	coding	120	363	525	887	75.0	-50	True	NA	NA
PB.3396.11	chr14	-	1890	6	full-splice_match	TRAPPC6B	ENST00000555269.5	1000	6	10	-900	10	772	multi-exon	FALSE	canonical	1	36552	junction_4	84143.74038512906	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-11	True	NA	NA
PB.2624.1	chr12	+	4842	29	novel_not_in_catalog	TNS2	novel	4737	29	NA	NA	-2501	4	intron_retention	TRUE	canonical	1	1876	junction_1	102152.48019936364	NA	1	NA	TRUE	NA	NA	NA	C	coding	1409	4230	119	4348	40.0	10	True	AATAAA	-23
PB.120.3	chr1	+	5828	7	novel_in_catalog	NECAP2	novel	2070	8	NA	NA	-6	0	intron_retention	FALSE	canonical	1	317549	junction_1	230031.43373491132	NA	6	NA	TRUE	NA	NA	NA	C	coding	223	672	48	719	40.0	-27	True	AATAAA	-17
PB.5154.2	chr17	-	2473	9	full-splice_match	TUBD1	ENST00000325752.7	2490	9	12	5	2	3	multi-exon	FALSE	canonical	1	54647	junction_8	19931.056318830044	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	277	1638	50.0	-19	True	AATAAA	-40
PB.2624.3	chr12	+	4850	29	full-splice_match	TNS2	ENST00000314250.10	5010	29	159	1	4	0	multi-exon	FALSE	canonical	1	55219	junction_1	96933.93036017589	NA	0	NA	TRUE	NA	NA	NA	C	coding	1409	4230	132	4361	40.0	-10	True	AATAAA	-18
PB.5154.1	chr17	-	2438	8	novel_in_catalog	TUBD1	novel	2184	7	NA	NA	-74	15	no_combination_of_known_junctions	FALSE	canonical	1	8079	junction_2	34501.69607188514	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	363	1583	15.0	-105	False	AATAAA	-39
PB.1397.14	chr10	-	2442	9	novel_in_catalog	NCOA4	novel	3489	10	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	79	939	10.0	17	True	ATTAAA	-15
PB.3795.19	chr15	+	2026	9	incomplete-splice_match	NUSAP1	ENST00000559596.5	1629	11	16223	-642	-2008	-6	5prime_fragment	FALSE	canonical	1	340076	junction_4	235741.98532810717	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	428	1168	30.0	-691	False	AATAAA	-16
PB.3795.18	chr15	+	2234	11	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48871	51	intron_retention	FALSE	canonical	1	1996	junction_7	328785.657364323	NA	2	NA	TRUE	NA	NA	NA	B	coding	267	804	75	878	30.0	1	True	AATAAA	-14
PB.3795.17	chr15	+	3751	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48871	51	intron_retention	FALSE	canonical	1	345996	junction_5	210945.85607077496	NA	1	NA	TRUE	NA	NA	NA	B	coding	245	738	2406	3143	30.0	1	True	AATAAA	-14
PB.3795.16	chr15	+	2012	11	full-splice_match	NUSAP1	ENST00000559596.5	1629	11	12	-395	0	50	multi-exon	FALSE	canonical	1	340076	junction_6	212887.24077654348	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	76	1401	40.0	0	True	AATAAA	-17
PB.3795.15	chr15	+	2378	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48870	304	intron_retention	FALSE	canonical	1	252	junction_7	320057.779969666	NA	1	NA	TRUE	NA	NA	NA	B	coding	283	852	76	927	35.0	0	True	AATAAA	-19
PB.3795.14	chr15	+	2487	11	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48870	303	intron_retention	FALSE	canonical	1	1996	junction_7	328785.657364323	NA	2	NA	TRUE	NA	NA	NA	B	coding	267	804	76	879	30.0	0	True	AATAAA	-18
PB.3795.13	chr15	+	1966	11	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48868	54	no_combination_of_known_junctions	FALSE	canonical	1	305207	junction_3	245058.9435741736	NA	1	NA	TRUE	NA	NA	NA	B	coding	425	1278	78	1355	40.0	-2	True	AATAAA	-17
PB.3795.12	chr15	+	2267	11	full-splice_match	NUSAP1	ENST00000414849.6	2274	11	10	-3	-2	3	multi-exon	FALSE	canonical	1	345996	junction_6	211743.24736682867	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	78	1400	35.0	-2	True	AATAAA	-25
PB.3795.11	chr15	+	1859	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	54	no_combination_of_known_junctions	FALSE	canonical	1	82661	junction_8	313597.267039222	NA	1	NA	TRUE	NA	NA	NA	B	coding	386	1161	88	1248	40.0	-12	True	AATAAA	-17
PB.3795.10	chr15	+	1905	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	55	no_combination_of_known_junctions	FALSE	canonical	1	82661	junction_8	294710.47034691315	NA	1	NA	TRUE	NA	NA	NA	B	coding	401	1206	88	1293	40.0	-12	True	AATAAA	-18
PB.969.3	chr1	+	4794	16	novel_not_in_catalog	XPR1	novel	8474	15	NA	NA	6	223	any annotated donor/acceptor	FALSE	canonical	1	117	junction_3	85331.27748940205	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	451	2511	40.0	-12	True	AATAAA	-26
PB.9432.1	chr5	-	1628	2	intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	14278	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-221	False	AATAAA	-16
PB.8303.10	chr3	-	2729	1	novel_in_catalog	SPICE1	novel	5417	18	NA	NA	0	-5879	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.9384.3	chr5	+	2090	2	full-splice_match	WDR36	ENST00000515784.1	562	2	-32	-1496	1	1496	multi-exon	FALSE	canonical	1	166041	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	75	228	143	370	95.0	-33	True	NA	NA
PB.8281.2	chr3	-	4625	9	novel_not_in_catalog	CBLB	novel	6749	19	NA	NA	100	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	64338.448083042655	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	84	1118	30.0	941	False	TATAAA	-15
PB.9384.2	chr5	+	2919	23	full-splice_match	WDR36	ENST00000513710.3	3140	23	28	193	-5	-193	multi-exon	FALSE	canonical	1	149231	junction_4	70880.2157757825	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	116	2803	35.0	-6	True	AATAAA	-22
PB.8722.5	chr4	+	2719	28	novel_in_catalog	ANAPC4	novel	2685	29	NA	NA	-33	1	intron_retention	FALSE	canonical	1	99324	junction_14	88825.70032665807	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	96	1784	10.0	-12	True	AATAAA	-22
PB.8772.2	chr4	+	4112	3	novel_not_in_catalog	MTND3P22	novel	243	2	NA	NA	-85322	10873	any annotated donor/acceptor	FALSE	canonical	1	1696	junction_2	2282.5	NA	17	NA	FALSE	NA	NA	NA	A	coding	110	333	2788	3120	35.0	NA	False	AATAAA	-19
PB.8772.1	chr4	+	3278	1	intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	14	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.8505.8	chr3	+	2857	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	-59	4	combination_of_known_junctions	FALSE	canonical	1	37981	junction_1	147941.57282002317	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	248	1759	20.0	-492	False	AATAAA	-18
PB.8220.4	chr3	-	5542	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	8	1299	-5	722	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	1	NA	TRUE	NA	NA	NA	C	coding	1093	3282	210	3491	10.0	-22	True	NA	NA
PB.7060.2	chr2	-	3875	2	full-splice_match	GPR55	ENST00000392040.5	3828	2	-39	-8	-39	-1	multi-exon	FALSE	canonical	1	8835	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	233	1192	20.0	2478	False	AATAAA	-22
PB.259.3	chr1	-	2750	11	full-splice_match	BSDC1	ENST00000455895.6	2846	11	11	85	4	-17	multi-exon	FALSE	canonical	1	165342	junction_10	145162.07073202697	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	24	1316	85.0	-10	True	NA	NA
PB.4668.3	chr17	+	4294	11	novel_in_catalog	CTNS	novel	2866	12	NA	NA	-1	2	intron_retention	FALSE	canonical	1	87112	junction_5	36173.38449868909	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	338	1234	20.0	-1	True	ATTAAA	-21
PB.4668.2	chr17	+	2545	11	novel_in_catalog	CTNS	novel	2866	12	NA	NA	-14	2	intron_retention	FALSE	canonical	1	6397	junction_2	49858.9866632887	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	712	1374	20.0	-14	True	ATTAAA	-21
PB.4668.1	chr17	+	2621	12	full-splice_match	CTNS	ENST00000046640.7	2866	12	247	-2	-10	2	multi-exon	FALSE	canonical	1	87112	junction_5	34592.592240258986	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	347	1450	20.0	-10	True	ATTAAA	-21
PB.8275.2	chr3	+	5783	11	full-splice_match	CEP97	ENST00000341893.7	8361	11	689	1889	21	-1889	multi-exon	FALSE	canonical	1	50304	junction_1	13858.549745554186	NA	2	NA	TRUE	NA	NA	NA	C	coding	865	2598	64	2661	50.0	-5	True	NA	NA
PB.4668.4	chr17	+	3375	12	full-splice_match	CTNS	ENST00000046640.7	2866	12	264	-773	3	769	multi-exon	FALSE	canonical	1	87112	junction_5	34592.592240258986	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	330	1433	80.0	7	True	NA	NA
PB.1918.2	chr11	+	4129	18	novel_in_catalog	ATG13	novel	624	5	NA	NA	-15	-1	intron_retention	TRUE	canonical	1	34075	junction_1	178826.9273021411	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	500	1942	10.0	-66	False	AATAAA	-19
PB.1918.3	chr11	+	2637	18	novel_not_in_catalog	ATG13	novel	624	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	183326.1974988788	NA	6	1	TRUE	NA	NA	NA	C	coding	480	1443	487	1929	20.0	-51	True	AATAAA	-19
PB.1918.1	chr11	+	4041	17	full-splice_match	ATG13	ENST00000524625.5	4014	17	-28	1	0	-1	multi-exon	FALSE	canonical	1	84786	junction_2	143302.18115265857	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	412	1854	10.0	-29	True	AATAAA	-19
PB.1918.6	chr11	+	2000	16	novel_in_catalog	ATG13	novel	624	5	NA	NA	-3	-121	combination_of_known_junctions	FALSE	canonical	1	64762	junction_1	127766.92185249757	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	351	1793	10.0	-24	True	NA	NA
PB.1918.7	chr11	+	3979	16	novel_in_catalog	ATG13	novel	624	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	64762	junction_1	127766.92185249757	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	350	1792	10.0	-23	True	AATAAA	-19
PB.1918.4	chr11	+	2653	18	novel_not_in_catalog	ATG13	novel	624	5	NA	NA	4	-7	any annotated donor/acceptor	FALSE	canonical	1	116	junction_2	185754.00592747336	NA	5	1	TRUE	NA	NA	NA	C	coding	480	1443	509	1951	25.0	-25	True	AATAAA	-13
PB.1918.5	chr11	+	3914	16	novel_in_catalog	ATG13	novel	624	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	5536	junction_12	183668.77808724655	NA	4	1	TRUE	NA	NA	NA	C	coding	122	369	1366	1734	15.0	-24	True	AATAAA	-12
PB.8722.6	chr4	+	2627	29	full-splice_match	ANAPC4	ENST00000315368.7	2685	29	59	-1	-21	1	multi-exon	FALSE	canonical	1	99324	junction_14	88009.50080057885	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	84	2510	10.0	0	True	AATAAA	-22
PB.6131.1	chr19	+	4192	10	novel_in_catalog	SNRNP70	novel	1757	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	859448	junction_7	674950.9272305343	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	3005	4030	10.0	0	True	AATAAA	-18
PB.1918.8	chr11	+	2683	18	novel_in_catalog	ATG13	novel	624	5	NA	NA	-2	10	combination_of_known_junctions	FALSE	canonical	1	70433	junction_2	170454.59635820953	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	522	1964	35.0	-23	True	AATAAA	-30
PB.1918.9	chr11	+	4150	18	novel_in_catalog	ATG13	novel	624	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	70433	junction_2	170454.59635820953	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	521	1963	10.0	-22	True	AATAAA	-19
PB.6131.4	chr19	+	2718	8	incomplete-splice_match	SNRNP70	ENST00000601065.5	1757	11	8	4462	4	2018	3prime_fragment	FALSE	canonical	1	859448	junction_7	732054.1517791577	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	221	721	70.0	1	True	NA	NA
PB.6131.5	chr19	+	1661	10	full-splice_match	SNRNP70	ENST00000221448.9	1603	10	-10	-48	-10	6	multi-exon	FALSE	canonical	1	964523	junction_9	666620.1371972563	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	207	1493	10.0	-10	True	AATAAA	-24
PB.6131.6	chr19	+	3131	11	novel_in_catalog	SNRNP70	novel	1757	11	NA	NA	-5	7	combination_of_known_junctions	FALSE	canonical	1	71236	junction_8	1049412.0468305526	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	2594	2962	10.0	-5	True	AATAAA	-25
PB.6131.7	chr19	+	4171	10	novel_in_catalog	SNRNP70	novel	1757	11	NA	NA	0	6	intron_retention	FALSE	canonical	1	859448	junction_7	823107.1627964908	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	3005	4003	10.0	0	True	AATAAA	-24
PB.1411.2	chr10	+	5000	5	novel_in_catalog	ASAH2B	novel	3715	6	NA	NA	7	9	combination_of_known_junctions	FALSE	canonical	1	722	junction_3	27546.417728762844	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	2	490	35.0	-7	True	AATAAA	-18
PB.9384.9	chr5	+	4355	1	novel_in_catalog	WDR36	novel	7048	23	NA	NA	4	1496	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	3	True	NA	NA
PB.5504.35	chr18	-	3126	6	incomplete-splice_match	PIGN	ENST00000638329.1	2367	15	25	39742	0	1138	3prime_fragment	FALSE	canonical	1	30297	junction_4	61483.07548781209	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	340	936	80.0	-32	True	NA	NA
PB.5504.34	chr18	-	2077	14	incomplete-splice_match	PIGN	ENST00000638183.1	4046	29	-21	60928	2	95	3prime_fragment	FALSE	canonical	0	0	junction_3	46835.26539798197	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	226	1698	30.0	-44	True	AATAAA	-12
PB.5504.33	chr18	-	2219	15	full-splice_match	PIGN	ENST00000638329.1	2367	15	0	148	0	98	multi-exon	FALSE	canonical	0	0	junction_3	52082.84740523251	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	365	1837	25.0	-57	True	AATAAA	-15
PB.5504.32	chr18	-	2201	14	incomplete-splice_match	PIGN	ENST00000638183.1	4046	29	0	60783	0	-6	3prime_fragment	FALSE	canonical	0	0	junction_3	46835.26539798197	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	205	1677	85.0	-23	True	NA	NA
PB.5504.31	chr18	-	4472	31	novel_in_catalog	PIGN	novel	2493	25	NA	NA	1	183	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	52820.63554647306	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	448	3141	70.0	-63	True	NA	NA
PB.7798.2	chr22	+	5873	7	full-splice_match	MIEF1	ENST00000404569.5	3797	7	-120	-1956	1	2	multi-exon	TRUE	canonical	1	11156	junction_2	113875.83632587147	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	671	2062	10.0	-10	True	AATAAA	-19
PB.7798.3	chr22	+	5630	6	full-splice_match	MIEF1	ENST00000433117.6	3838	6	-39	-1753	7	1	multi-exon	FALSE	canonical	1	99354	junction_4	74876.99412609992	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	963	1820	5.0	-4	True	AATAAA	-18
PB.7798.1	chr22	+	3908	7	novel_not_in_catalog	MIEF1	novel	573	3	NA	NA	16	-17	intron_retention	FALSE	canonical	1	4082	junction_2	115408.95678809624	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	679	2070	85.0	-170	False	NA	NA
PB.7798.6	chr22	+	3949	7	novel_in_catalog	MIEF1	novel	573	3	NA	NA	-10	-17	intron_retention	FALSE	canonical	1	4788	junction_2	115254.15540074417	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	720	2111	85.0	2	True	NA	NA
PB.7798.7	chr22	+	4739	6	full-splice_match	MIEF1	ENST00000433117.6	3838	6	-8	-893	-8	-859	multi-exon	FALSE	canonical	1	99354	junction_4	74876.99412609992	NA	2	NA	TRUE	NA	NA	NA	C	coding	285	858	932	1789	5.0	4	True	AATAAA	-12
PB.7798.4	chr22	+	5711	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	-86	0	11	0	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	511	1902	5.0	0	True	AATAAA	-17
PB.7798.5	chr22	+	3269	6	full-splice_match	MIEF1	ENST00000433117.6	3838	6	-16	585	-16	87	multi-exon	FALSE	canonical	1	99354	junction_4	74876.99412609992	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	940	1797	15.0	-4	True	NA	NA
PB.10752.3	chr7	+	2261	14	incomplete-splice_match	LRWD1	ENST00000292616.9	2215	15	53	5	-19	-3	intron_retention	FALSE	canonical	1	187333	junction_1	63751.06736305671	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	100	2013	35.0	-2	True	ATTAAA	-14
PB.10752.2	chr7	+	2181	15	full-splice_match	LRWD1	ENST00000292616.9	2215	15	30	4	3	-2	multi-exon	FALSE	canonical	1	187333	junction_1	61593.11629379221	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	123	2066	30.0	-25	True	ATTAAA	-15
PB.7798.8	chr22	+	3930	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	-59	1754	-8	-2	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	484	1875	30.0	4	True	ATTAAA	-18
PB.7798.9	chr22	+	3836	7	full-splice_match	MIEF1	ENST00000404569.5	3797	7	-56	17	19	-17	multi-exon	FALSE	canonical	1	11156	junction_2	113875.83632587147	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	607	1998	85.0	-41	True	NA	NA
PB.7915.3	chr3	-	1586	3	full-splice_match	THUMPD3-AS1	ENST00000489616.1	583	3	-13	-990	7	212	multi-exon	FALSE	canonical	1	4979	junction_2	45815.0	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2149	False	NA	NA
PB.10752.4	chr7	+	2331	14	novel_in_catalog	LRWD1	novel	2215	15	NA	NA	-17	-3	intron_retention	FALSE	canonical	1	187333	junction_1	59251.30942602219	NA	4	NA	TRUE	NA	NA	NA	C	coding	333	1002	98	1099	35.0	0	True	ATTAAA	-14
PB.7479.2	chr21	-	2984	2	full-splice_match	RWDD2B	ENST00000466746.1	842	2	-27	-2115	7	-2	multi-exon	FALSE	canonical	1	151950	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	57	371	15.0	15	True	AATAAA	-14
PB.7479.3	chr21	-	1761	4	full-splice_match	RWDD2B	ENST00000472184.1	1787	4	24	2	5	-2	multi-exon	FALSE	canonical	1	151950	junction_3	58401.57084835609	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	386	1105	15.0	13	True	AATAAA	-14
PB.9263.15	chr5	+	2974	16	novel_not_in_catalog	SLC30A5	novel	4360	16	NA	NA	-45	147	intron_retention	FALSE	canonical	1	7277	junction_10	147354.92443931272	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	213	2318	50.0	-15	True	AATAAA	-27
PB.7479.1	chr21	-	1715	5	full-splice_match	RWDD2B	ENST00000493196.1	3094	5	3	1376	3	-1	multi-exon	FALSE	canonical	1	151950	junction_4	50761.98251829315	NA	2	NA	TRUE	NA	NA	NA	C	coding	319	960	99	1058	15.0	5066	False	AATAAA	-15
PB.9263.13	chr5	+	3055	16	full-splice_match	SLC30A5	ENST00000396591.7	4360	16	358	947	13	-4	multi-exon	FALSE	canonical	1	156490	junction_1	98606.98020809684	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	253	2550	50.0	-55	True	AGTAAA	-18
PB.9263.12	chr5	+	2951	14	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	7	138	intron_retention	FALSE	canonical	1	29076	junction_1	128632.21044273714	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	259	2304	50.0	-61	True	AATAAA	-18
PB.7479.4	chr21	-	1605	4	full-splice_match	RWDD2B	ENST00000286777.6	1625	4	17	3	5	-3	multi-exon	FALSE	canonical	1	57766	junction_2	73387.0472873487	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	59	370	15.0	13	True	AATAAA	-13
PB.9263.10	chr5	+	1311	4	full-splice_match	SLC30A5	ENST00000380860.8	1317	4	4	2	4	-2	multi-exon	FALSE	canonical	1	99710	junction_3	52364.81332599847	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	262	618	15.0	-64	True	AATAAA	-14
PB.6485.8	chr2	+	1394	4	full-splice_match	PEX13	ENST00000295030.5	4470	4	8	3068	0	-3068	multi-exon	FALSE	canonical	1	148551	junction_1	74350.02594634533	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	31	1242	10.0	10	True	ATTAAA	-13
PB.8220.8	chr3	-	4117	17	full-splice_match	TMF1	ENST00000646708.1	4867	17	18	732	-12	497	multi-exon	FALSE	canonical	1	31663	junction_15	86132.93045198273	NA	1	NA	TRUE	NA	NA	NA	C	coding	1096	3291	230	3520	55.0	17	True	TTTAAA	-20
PB.9263.19	chr5	+	3832	16	full-splice_match	SLC30A5	ENST00000396591.7	4360	16	430	98	-13	-94	multi-exon	FALSE	canonical	1	156490	junction_1	98606.98020809684	NA	2	NA	TRUE	NA	NA	NA	C	coding	765	2298	181	2478	35.0	17	True	TATAAA	-41
PB.9263.18	chr5	+	2844	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	-30	-74	intron_retention	FALSE	canonical	1	3193	junction_3	129749.1915555208	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	634	2409	35.0	0	True	AATAAA	-17
PB.11200.4	chr8	-	2084	5	novel_not_in_catalog	IL7	novel	635	5	NA	NA	1	-3157	any annotated donor/acceptor	FALSE	canonical	1	31	junction_1	11509.153324636874	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	542	910	30.0	-1	True	ATTAAA	-23
PB.4173.1	chr16	-	4738	6	full-splice_match	BRICD5	ENST00000328540.7	1913	6	-2825	0	-2825	0	multi-exon	FALSE	canonical	1	58734	junction_5	19386.68640485011	NA	36	NA	TRUE	NA	NA	NA	A	coding	228	687	3943	4629	10.0	22	False	AATAAA	-15
PB.4173.2	chr16	-	2742	2	full-splice_match	PGP	ENST00000333503.7	2727	2	-10	-5	-10	5	multi-exon	FALSE	canonical	1	478176	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	321	966	41	1006	5.0	-20	True	ATTAAA	-18
PB.4173.3	chr16	-	1010	2	full-splice_match	PGP	ENST00000333503.7	2727	2	10	1707	10	-1442	multi-exon	FALSE	canonical	1	478176	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	21	986	75.0	0	True	NA	NA
PB.5448.10	chr18	-	1903	1	novel_in_catalog	ZNF24	novel	6307	4	NA	NA	0	-2191	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	15	False	NA	NA
PB.8346.14	chr3	-	3259	12	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	15314	junction_2	166452.78679950754	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	222	2423	40.0	-1	True	AATAAA	-16
PB.6426.13	chr2	-	1909	13	novel_not_in_catalog	HNRNPLL	novel	4173	13	NA	NA	17	-62	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	178359.8310061869	NA	2	1	TRUE	NA	NA	NA	C	coding	437	1314	508	1821	10.0	284	False	ATTAAA	-23
PB.6426.12	chr2	-	1886	14	full-splice_match	HNRNPLL	ENST00000409636.5	3980	14	-28	2122	-21	-68	multi-exon	FALSE	non_canonical	0	0	junction_9	167286.99024655647	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	191	1804	10.0	-11	True	ATTAAA	-17
PB.8224.1	chr3	+	2130	10	full-splice_match	MITF	ENST00000448226.7	2096	10	-34	0	13	0	multi-exon	FALSE	canonical	1	34134	junction_6	33483.49873454345	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	151	1731	90.0	-34	True	NA	NA
PB.9045.1	chr4	-	3807	9	novel_in_catalog	PPID	novel	1823	10	NA	NA	1	6	intron_retention	FALSE	canonical	1	462305	junction_8	132187.39654369475	NA	4	1	TRUE	NA	NA	NA	C	coding	251	756	2444	3199	15.0	-4	True	AATAAA	-22
PB.981.20	chr1	+	5284	21	novel_in_catalog	SMG7	novel	1190	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	5037	junction_16	128715.51778160821	NA	5	NA	TRUE	NA	NA	NA	C	coding	967	2904	122	3025	20.0	-7	True	ATTAAA	-18
PB.9045.3	chr4	-	1802	10	full-splice_match	PPID	ENST00000307720.3	1823	10	26	-5	26	5	multi-exon	FALSE	canonical	1	462305	junction_9	130736.76704992619	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	83	1195	15.0	21	True	AATAAA	-21
PB.9045.2	chr4	-	2628	9	novel_in_catalog	PPID	novel	1823	10	NA	NA	4	6	intron_retention	FALSE	canonical	1	462305	junction_8	106246.36590843943	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	105	1172	15.0	-1	True	AATAAA	-22
PB.9045.4	chr4	-	1422	10	full-splice_match	PPID	ENST00000307720.3	1823	10	-21	422	-21	205	multi-exon	FALSE	canonical	1	462305	junction_9	130736.76704992619	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	130	1242	15.0	-26	True	AATAAA	-20
PB.9632.19	chr5	-	2706	8	full-splice_match	KIAA1191	ENST00000510164.5	1243	8	-35	-1428	1	-1	multi-exon	FALSE	canonical	1	29802	junction_7	152451.7147471518	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	312	1172	20.0	-33	True	AATAAA	-18
PB.1139.2	chr1	-	1730	11	novel_not_in_catalog	TAF1A	novel	1648	11	NA	NA	10	-7	any annotated donor/acceptor	FALSE	canonical	1	1562	junction_4	33186.274738210675	NA	7	1	TRUE	NA	NA	NA	C	coding	410	1233	153	1385	35.0	3	True	AATAAA	-21
PB.6485.1	chr2	+	2811	5	novel_not_in_catalog	PEX13	novel	1533	2	NA	NA	-16	-268	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	126512.43351421037	NA	2	1	TRUE	NA	NA	NA	C	coding	403	1212	57	1268	35.0	-16	True	AATAAA	-19
PB.8397.2	chr3	+	3345	27	full-splice_match	ATP2C1	ENST00000505330.5	4888	27	168	1375	-20	433	multi-exon	FALSE	canonical	1	81268	junction_1	224764.1897892047	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	59	2920	25.0	-6	True	AATACA	-26
PB.9636.13	chr5	-	3242	11	novel_in_catalog	RNF44	novel	4155	11	NA	NA	148	-577	combination_of_known_junctions	FALSE	canonical	1	82063	junction_10	146554.07153269404	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	433	1488	20.0	-1	True	ATTAAA	-23
PB.9636.12	chr5	-	3821	11	novel_in_catalog	RNF44	novel	4155	11	NA	NA	21	-249	combination_of_known_junctions	FALSE	canonical	1	82063	junction_10	146554.07153269404	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	684	1739	20.0	2	True	AATATA	-27
PB.1819.58	chr11	-	3457	1	novel_in_catalog	EIF4G2	novel	3978	22	NA	NA	-2	-485	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-1	True	NA	NA
PB.1819.59	chr11	-	3294	1	novel_in_catalog	EIF4G2	novel	3978	22	NA	NA	-2	-648	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.1819.54	chr11	-	3221	22	full-splice_match	EIF4G2	ENST00000339995.9	3978	22	185	572	-1	86	multi-exon	FALSE	canonical	1	3229390	junction_21	1119405.3991834996	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	926	3031	35.0	0	True	NA	NA
PB.1819.55	chr11	-	3116	21	full-splice_match	EIF4G2	ENST00000396525.6	3346	21	-226	456	-5	86	multi-exon	FALSE	canonical	1	1013607	junction_8	1624338.354514539	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	935	2926	35.0	-9	True	NA	NA
PB.1819.56	chr11	-	3003	22	full-splice_match	EIF4G2	ENST00000339995.9	3978	22	181	794	0	-32	multi-exon	FALSE	canonical	1	3229390	junction_21	1119405.3991834996	NA	1	NA	TRUE	NA	NA	NA	C	coding	691	2073	930	3002	60.0	-4	True	NA	NA
PB.1819.57	chr11	-	2081	17	incomplete-splice_match	EIF4G2	ENST00000339995.9	3978	22	185	3464	-1	13	3prime_fragment	FALSE	canonical	1	3229390	junction_16	1123745.9264855813	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1155	926	2080	55.0	0	True	NA	NA
PB.1819.53	chr11	-	3604	22	full-splice_match	EIF4G2	ENST00000339995.9	3978	22	186	188	0	-72	multi-exon	FALSE	canonical	1	3229390	junction_21	1119405.3991834996	NA	2	NA	TRUE	NA	NA	NA	C	coding	701	2106	925	3030	40.0	1	True	AAGAAA	-17
PB.11932.19	chr9	+	3912	24	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	94	-29	combination_of_known_junctions	FALSE	canonical	1	16216	junction_1	93472.1067872935	NA	0	NA	TRUE	NA	NA	NA	C	coding	1006	3021	133	3153	80.0	-4314	False	AATAAA	-38
PB.10671.3	chr7	+	1914	5	full-splice_match	RBM48	ENST00000265732.9	1742	5	22	-194	-12	194	multi-exon	FALSE	canonical	1	62986	junction_2	42521.43753082085	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	20	1123	25.0	-12	True	AATACA	-13
PB.10671.2	chr7	+	2200	5	full-splice_match	RBM48	ENST00000265732.9	1742	5	12	-470	12	-1	multi-exon	FALSE	canonical	1	62986	junction_2	42521.43753082085	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	30	1133	10.0	-22	True	GATAAA	-19
PB.10671.1	chr7	+	1731	5	full-splice_match	RBM48	ENST00000265732.9	1742	5	4	7	4	-7	multi-exon	TRUE	canonical	1	62986	junction_2	42521.43753082085	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	38	1141	50.0	-30	True	AATAAA	-31
PB.11932.11	chr9	+	5140	27	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	124	junction_2	115719.30587499576	NA	1	NA	TRUE	NA	NA	NA	C	coding	1260	3783	187	3969	30.0	-16	True	AATAAA	-17
PB.11932.16	chr9	+	2672	16	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	12613	junction_15	99076.85933186754	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	25	2430	20.0	-6	True	AATAAA	-16
PB.11932.17	chr9	+	3076	19	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	18304	junction_18	104028.90247740922	NA	1	NA	TRUE	NA	NA	NA	C	coding	927	2784	19	2802	45.0	0	True	ATTAAA	-26
PB.10671.5	chr7	+	1895	5	novel_in_catalog	RBM48	novel	1742	5	NA	NA	64	-8	combination_of_known_junctions	FALSE	canonical	1	4343	junction_1	66359.20280705232	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	377	1306	50.0	-6652	False	AATAAA	-30
PB.10671.4	chr7	+	2109	5	novel_not_in_catalog	RBM48	novel	1742	5	NA	NA	-9	-25	any annotated donor/acceptor	FALSE	canonical	1	21957	junction_4	59799.05057983781	NA	2	NA	TRUE	NA	NA	NA	C	coding	375	1128	17	1144	25.0	-9	True	AATAAA	-13
PB.11633.2	chr9	+	5695	26	novel_not_in_catalog	DAPK1	novel	5743	26	NA	NA	7	-41	any annotated donor/acceptor	TRUE	canonical	1	694	junction_23	80946.70308230225	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	3000	4472	0.0	0	True	TATAAA	-17
PB.11633.3	chr9	+	5670	25	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	12	13	no_combination_of_known_junctions	FALSE	canonical	1	4867	junction_10	63385.609899500036	NA	1	NA	TRUE	NA	NA	NA	C	coding	1399	4200	189	4388	35.0	5	True	AATAAA	-31
PB.11633.1	chr9	+	5755	26	full-splice_match	DAPK1	ENST00000472284.5	5759	26	7	-3	7	0	multi-exon	FALSE	canonical	1	22344	junction_1	47988.62507143125	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	194	4486	20.0	0	True	AATAAA	-18
PB.11633.6	chr9	+	2816	2	full-splice_match	DAPK1	ENST00000470267.1	579	2	-45	-2192	-14	2192	multi-exon	FALSE	canonical	1	112699	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-5	True	NA	NA
PB.11633.7	chr9	+	3678	1	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	-14	2192	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-5	True	NA	NA
PB.11633.4	chr9	+	5789	26	novel_not_in_catalog	DAPK1	novel	5743	26	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	62743.47923537554	NA	6	2	TRUE	NA	NA	NA	C	coding	1442	4329	192	4520	20.0	2	True	AATAAA	-18
PB.11633.5	chr9	+	5927	26	full-splice_match	DAPK1	ENST00000408954.7	5892	26	-14	-21	-14	16	multi-exon	FALSE	canonical	1	112699	junction_1	35754.474926957046	NA	2	NA	TRUE	NA	NA	NA	C	coding	1430	4293	350	4642	35.0	-5	True	AATAAA	-34
PB.4936.1	chr17	-	3249	1	full-splice_match	EPOP	ENST00000621654.1	3719	1	464	6	464	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	379	1140	463	1602	30.0	-1	True	CATAAA	-15
PB.11633.8	chr9	+	2440	16	full-splice_match	DAPK1	ENST00000469067.5	2499	16	131	-72	-14	72	multi-exon	FALSE	canonical	1	112699	junction_1	36608.03035667933	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	350	2014	15.0	-5	True	ATTAAA	-14
PB.11633.9	chr9	+	3497	1	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	-21	2004	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-12	True	NA	NA
PB.4489.1	chr16	-	1634	8	full-splice_match	ATP6V0D1	ENST00000290949.7	1716	8	80	2	0	-2	multi-exon	TRUE	canonical	1	1000433	junction_6	267157.2950774544	NA	0	NA	TRUE	NA	NA	NA	A	coding	351	1056	72	1127	10.0	-13	True	AATAAA	-19
PB.7019.1	chr2	-	2019	8	full-splice_match	NHEJ1	ENST00000356853.9	2094	8	37	38	-18	-30	multi-exon	FALSE	canonical	1	130681	junction_7	36481.68029830527	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	98	997	70.0	-11	True	NA	NA
PB.4242.1	chr16	-	3085	6	incomplete-splice_match	TVP23A	ENST00000573360.5	3677	8	43445	4	-175	1	5prime_fragment	FALSE	canonical	1	11941	junction_1	13300.121779893596	NA	1	NA	TRUE	NA	NA	NA	A	coding	149	450	214	663	0.0	1526	False	NA	NA
PB.7279.20	chr20	+	1908	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	2	-19	combination_of_known_junctions	FALSE	canonical	1	92529	junction_13	892003.3590290914	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	26	1825	65.0	2	True	AAGAAA	-40
PB.261.4	chr1	-	1951	6	novel_in_catalog	ZBTB8OS	novel	312	2	NA	NA	-52	-6	combination_of_known_junctions	FALSE	canonical	1	80778	junction_4	134650.5667713285	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-24	False	AATAAA	-13
PB.4791.10	chr17	+	2564	13	novel_in_catalog	TRPV2	novel	2808	15	NA	NA	36	-1	no_combination_of_known_junctions	FALSE	canonical	1	1149	junction_12	133769.96594548255	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2199	364	2562	35.0	7	True	AATATA	-14
PB.4791.11	chr17	+	2577	15	novel_not_in_catalog	TRPV2	novel	2808	15	NA	NA	241	0	any annotated donor/acceptor	FALSE	canonical	1	5585	junction_14	145681.5988688331	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	159	2360	35.0	0	True	AATATA	-15
PB.4791.12	chr17	+	2683	15	novel_not_in_catalog	TRPV2	novel	2808	15	NA	NA	1235	0	any annotated donor/acceptor	FALSE	canonical	1	68	junction_1	150840.7821317138	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2292	280	2571	35.0	-3355	False	AATATA	-15
PB.9051.1	chr4	+	2175	1	full-splice_match	FAM218A	ENST00000648094.1	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	121	366	944	1309	10.0	0	True	NA	NA
PB.4791.14	chr17	+	2308	14	novel_not_in_catalog	TRPV2	novel	2808	15	NA	NA	-32	0	any annotated donor/acceptor	FALSE	canonical	1	816	junction_1	155906.11458091045	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	265	2196	35.0	-827	False	AATATA	-15
PB.8397.4	chr3	+	2579	1	genic	ATP2C1	novel	NA	NA	NA	NA	-55	-3105	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-3	True	NA	NA
PB.1242.18	chr1	+	4783	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	3355	-245	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	85886.04900565905	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1195	2349	35.0	0	True	TTTAAA	-13
PB.11415.8	chr8	-	2075	5	full-splice_match	ZNF250	ENST00000533221.5	593	5	-30	-1452	0	-15	multi-exon	FALSE	canonical	1	8361	junction_1	39691.697179636954	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	110	1714	35.0	-1	True	AATAAA	-31
PB.2780.4	chr12	+	4042	3	antisense	novelGene_LIN7A_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6601	junction_2	8563.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-2	True	ATTAAA	-11
PB.2780.5	chr12	+	1539	2	intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	23727	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.2780.2	chr12	+	2265	1	intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-6	True	AATGAA	-29
PB.2780.3	chr12	+	3938	1	intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-5	True	NA	NA
PB.2780.1	chr12	+	3989	4	antisense	novelGene_LIN7A_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3749	junction_1	8822.661881012253	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-79	False	ATTAAA	-18
PB.5589.4	chr19	+	2875	7	novel_in_catalog	SF3A2	novel	1963	9	NA	NA	-7	-22	intron_retention	FALSE	canonical	1	1082940	junction_6	154630.1689179163	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	1805	2764	15.0	0	True	ATTAAA	-15
PB.5589.5	chr19	+	1221	10	novel_not_in_catalog	SF3A2	novel	1963	9	NA	NA	-6	-18	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	460317.19575023267	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	93	1106	20.0	1	True	ATTAAA	-19
PB.5589.1	chr19	+	2208	13	novel_not_in_catalog	SF3A2	novel	1963	9	NA	NA	4	3394	any annotated donor/acceptor	FALSE	canonical	1	6457	junction_9	614580.1896984234	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	104	2092	5.0	-10	True	AATAAA	-19
PB.5589.2	chr19	+	1618	9	full-splice_match	SF3A2	ENST00000221494.9	1963	9	332	13	4	-13	multi-exon	FALSE	canonical	1	1082940	junction_8	231330.83614058027	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	104	1498	15.0	-10	True	ATTAAA	-24
PB.5589.3	chr19	+	2818	8	novel_in_catalog	SF3A2	novel	1963	9	NA	NA	5	-9	intron_retention	FALSE	canonical	1	1082940	junction_7	238424.19390400697	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	1678	2694	15.0	-9	True	ATTAAA	-28
PB.8397.5	chr3	+	4504	11	incomplete-splice_match	ATP2C1	ENST00000505330.5	4888	27	97	40435	91	3134	3prime_fragment	FALSE	canonical	1	81268	junction_1	217215.03924178454	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	130	1134	95.0	1	True	NA	NA
PB.893.5	chr1	+	1662	13	incomplete-splice_match	NUF2	ENST00000271452.7	1969	14	4121	5	4029	-5	5prime_fragment	FALSE	canonical	1	252533	junction_3	33669.253287082596	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	116	1372	10.0	4036	False	AGTAAA	-45
PB.9345.6	chr5	-	4461	8	novel_not_in_catalog	ARRDC3	novel	4188	8	NA	NA	-119	-3	any annotated donor/acceptor	FALSE	canonical	1	5971	junction_7	165130.67295018086	NA	11	NA	TRUE	NA	NA	NA	C	coding	194	585	1204	1788	25.0	3478	False	AATAAA	-26
PB.9345.7	chr5	-	3982	8	full-splice_match	ARRDC3	ENST00000265138.3	4188	8	40	166	40	-166	multi-exon	FALSE	canonical	1	366046	junction_6	59116.29947201792	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	228	1472	20.0	-3	True	ATTAAA	-20
PB.9345.2	chr5	-	4186	8	novel_not_in_catalog	ARRDC3	novel	4188	8	NA	NA	38	-2	any annotated donor/acceptor	TRUE	canonical	1	35162	junction_2	143033.42113346397	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	230	1327	25.0	-5	True	AATAAA	-27
PB.9345.3	chr5	-	3996	7	novel_in_catalog	ARRDC3	novel	4188	8	NA	NA	42	-2	combination_of_known_junctions	FALSE	canonical	1	39696	junction_5	166884.36996815092	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	738	1322	25.0	-1	True	AATAAA	-27
PB.9345.1	chr5	-	3980	8	full-splice_match	ARRDC3	ENST00000265138.3	4188	8	203	5	203	-5	multi-exon	FALSE	canonical	1	366046	junction_6	59116.29947201792	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	65	1309	30.0	592	False	AATAAA	-24
PB.9345.8	chr5	-	3796	8	full-splice_match	ARRDC3	ENST00000265138.3	4188	8	43	349	43	-349	multi-exon	FALSE	canonical	1	366046	junction_6	59116.29947201792	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	225	1469	35.0	0	True	AATAAA	-18
PB.9345.9	chr5	-	3251	8	full-splice_match	ARRDC3	ENST00000265138.3	4188	8	39	898	39	-898	multi-exon	FALSE	canonical	1	366046	junction_6	59116.29947201792	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	229	1473	10.0	-4	True	AATAAA	-19
PB.6546.1	chr2	+	1466	3	full-splice_match	SPR	ENST00000234454.5	1480	3	35	-21	13	21	multi-exon	FALSE	canonical	1	170511	junction_1	124095.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	261	786	39	824	30.0	-19	True	AATAAA	-39
PB.12019.1	chrX	-	4011	3	full-splice_match	TMEM47	ENST00000275954.3	4054	3	1	42	1	-42	multi-exon	FALSE	canonical	1	160562	junction_2	32601.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	259	804	80.0	-3	True	NA	NA
PB.5394.1	chr18	-	3518	16	incomplete-splice_match	PIEZO2	ENST00000580640.5	8334	54	442991	-657	-3616	256	5prime_fragment	FALSE	canonical	1	34744	junction_14	10886.140382461854	NA	0	NA	TRUE	NA	NA	NA	B	coding	951	2856	6	2861	80.0	NA	False	ATTAAA	-16
PB.12019.3	chrX	-	2586	3	full-splice_match	TMEM47	ENST00000275954.3	4054	3	-30	1498	-30	-1498	multi-exon	FALSE	canonical	1	160562	junction_2	32601.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	290	835	65.0	11	False	AAAACA	-7
PB.12019.2	chrX	-	3887	3	full-splice_match	TMEM47	ENST00000275954.3	4054	3	-21	188	-21	-188	multi-exon	FALSE	canonical	1	160562	junction_2	32601.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	281	826	40.0	20	False	AATATA	-18
PB.8397.6	chr3	+	3614	28	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	81268	junction_1	244323.10964259322	NA	1	1	TRUE	NA	NA	NA	C	coding	983	2952	227	3178	10.0	-3	True	ATTAAA	-5
PB.9089.6	chr4	-	2343	9	novel_in_catalog	IRF2	novel	2303	9	NA	NA	-173	-12	combination_of_known_junctions	FALSE	canonical	1	2209	junction_8	148247.6574964593	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	261	1310	20.0	190	False	AATAAA	-26
PB.11415.2	chr8	-	2447	6	full-splice_match	ZNF250	ENST00000292579.11	6364	6	-10	3927	-6	261	multi-exon	FALSE	canonical	1	19811	junction_4	34067.13263190784	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	128	1810	20.0	-19	True	CATAAA	-17
PB.8717.1	chr4	+	3348	1	antisense	novelGene_DHX15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9038.15	chr4	+	4491	1	novel_in_catalog	GUCY1B1	novel	2316	13	NA	NA	-4	-43003	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	134	405	87	491	65.0	16	True	NA	NA
PB.1405.1	chr10	-	3682	23	full-splice_match	OGDHL	ENST00000374103.8	3704	23	23	-1	23	1	multi-exon	TRUE	canonical	1	15755	junction_22	32456.67853994061	NA	4	NA	TRUE	NA	NA	NA	A	coding	1010	3033	64	3096	15.0	13	True	AATAAA	-17
PB.9038.16	chr4	+	3034	13	full-splice_match	GUCY1B1	ENST00000505154.5	2316	13	85	-803	-13	2	multi-exon	FALSE	canonical	1	6347	junction_1	60195.43076351855	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	207	1850	25.0	38	True	AATAAA	-19
PB.9038.11	chr4	+	2574	14	full-splice_match	GUCY1B1	ENST00000264424.12	3124	14	-24	574	4	184	multi-exon	FALSE	canonical	1	98629	junction_2	42022.3253945106	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	107	1966	50.0	-4	True	AAGAAA	-36
PB.9038.10	chr4	+	3359	15	novel_in_catalog	GUCY1B1	novel	2316	13	NA	NA	0	21	combination_of_known_junctions	FALSE	canonical	1	1261	junction_1	70565.7390821437	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	513	2156	60.0	-8	True	AATAAA	-38
PB.9038.13	chr4	+	3270	14	novel_in_catalog	GUCY1B1	novel	2316	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	3442	junction_9	60256.37476600155	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	100	2088	20.0	3	True	AATAAA	-17
PB.9038.12	chr4	+	1772	12	incomplete-splice_match	GUCY1B1	ENST00000264424.12	3124	14	-20	2883	8	-1840	3prime_fragment	FALSE	canonical	1	98629	junction_2	35848.5572804668	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1668	103	1770	65.0	0	True	NA	NA
PB.9359.1	chr5	+	1616	2	novel_not_in_catalog	LIX1-AS1	novel	1793	7	NA	NA	266893	-75372	any annotated donor/acceptor	FALSE	canonical	1	2118	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	A	coding	166	501	916	1416	70.0	-18	True	NA	NA
PB.9038.18	chr4	+	3266	13	incomplete-splice_match	GUCY1B1	ENST00000264424.12	3124	14	500	1	100	-1	5prime_fragment	FALSE	canonical	1	98629	junction_1	43390.728196112235	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	442	2085	20.0	187	False	AATAAA	-16
PB.9063.6	chr4	-	2294	1	novel_in_catalog	NEK1	novel	5536	35	NA	NA	1	-24984	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-44	True	NA	NA
PB.8397.7	chr3	+	3308	28	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	-4	-296	combination_of_known_junctions	FALSE	canonical	1	81268	junction_1	244323.10964259322	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	381	3182	40.0	-7	True	AATAAA	-26
PB.9063.1	chr4	-	3159	14	incomplete-splice_match	NEK1	ENST00000439128.6	5653	34	105505	1	-373	-1	5prime_fragment	FALSE	canonical	1	59911	junction_9	17950.913653792588	NA	0	NA	TRUE	NA	NA	NA	B	coding	589	1770	156	1925	30.0	NA	False	ATTAAA	-17
PB.12005.2	chrX	-	6436	3	incomplete-splice_match	KLHL15	ENST00000328046.8	6272	4	1856	61	1856	-61	5prime_fragment	FALSE	canonical	1	64626	junction_2	35814.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	604	1815	482	2296	55.0	351	False	TTTAAA	-4
PB.12005.3	chrX	-	2339	3	incomplete-splice_match	KLHL15	ENST00000328046.8	6272	4	1897	4117	1897	-4117	5prime_fragment	FALSE	canonical	1	64626	junction_2	35814.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	604	1815	441	2255	35.0	-1	True	ATTAAA	-20
PB.10573.2	chr7	+	2419	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27068	2281	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	2	NA	TRUE	NA	NA	NA	B	coding	148	447	135	581	30.0	-21	True	AATAAA	-14
PB.10573.3	chr7	+	2502	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27076	2286	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	0	NA	TRUE	NA	NA	NA	B	coding	148	447	127	573	25.0	-13	True	AATAAA	-19
PB.6946.8	chr2	+	2070	12	full-splice_match	STRADB	ENST00000194530.7	2293	12	99	124	-28	-124	multi-exon	FALSE	canonical	1	184	junction_8	45522.36581983312	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	267	1523	35.0	28	True	ATTAAA	-19
PB.10573.1	chr7	+	2256	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27062	2286	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	0	NA	TRUE	NA	NA	NA	B	coding	148	447	141	587	25.0	-27	True	AATAAA	-19
PB.10573.6	chr7	+	2543	3	full-splice_match	CRCP	ENST00000398684.6	492	3	1	-2052	1	2	multi-exon	FALSE	canonical	1	11778	junction_1	158685.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-8	True	AATAAA	-19
PB.10573.7	chr7	+	2274	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27084	2287	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	0	NA	TRUE	NA	NA	NA	B	coding	148	447	119	565	25.0	-5	True	AATAAA	-20
PB.4813.1	chr17	+	8308	2	full-splice_match	SMCR8	ENST00000406438.4	8279	2	-29	0	-29	0	multi-exon	FALSE	canonical	1	80189	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	937	2814	510	3323	20.0	-12	True	AATAAA	-18
PB.10573.5	chr7	+	2287	6	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27079	2287	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	160858.93344791268	NA	1	NA	TRUE	NA	NA	NA	B	coding	115	348	124	471	25.0	-10	True	AATAAA	-20
PB.10573.8	chr7	+	2379	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27086	2287	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	2	1	TRUE	NA	NA	NA	B	coding	148	447	117	563	25.0	-3	True	AATAAA	-20
PB.10573.9	chr7	+	2767	6	full-splice_match	CRCP	ENST00000395326.7	3009	6	244	-2	-1	2	multi-exon	FALSE	canonical	1	316119	junction_1	31571.901881261445	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	115	561	25.0	-1	True	AATAAA	-19
PB.354.10	chr1	+	3999	22	novel_in_catalog	AL451062.3	novel	4037	26	NA	NA	357	-226048	no_combination_of_known_junctions	FALSE	canonical	1	27065	junction_1	93800.46537226999	NA	0	NA	TRUE	NA	NA	NA	B	coding	1064	3195	209	3403	30.0	0	True	NA	NA
PB.2562.23	chr12	-	4767	12	novel_in_catalog	SCAF11	novel	7543	15	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	10407	junction_10	168056.1654031667	NA	1	NA	TRUE	NA	NA	NA	C	coding	1009	3027	1740	4766	80.0	-10	True	NA	NA
PB.2562.22	chr12	-	3154	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	50	7600	50	-15	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	1	NA	TRUE	NA	NA	NA	C	coding	990	2970	185	3154	65.0	1543	False	NA	NA
PB.2562.21	chr12	-	3335	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	-25	7494	-6	91	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3075	260	3334	45.0	3	True	NA	NA
PB.2562.20	chr12	-	4665	14	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	-70	3216	-51	9	3prime_fragment	FALSE	canonical	1	286070	junction_11	101018.68578757359	NA	1	NA	TRUE	NA	NA	NA	C	coding	1433	4302	305	4606	15.0	1423	False	AATAAA	-26
PB.2562.27	chr12	-	2486	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	-29	8347	-10	-762	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2223	264	2486	60.0	-1	True	AATGAA	-34
PB.2562.26	chr12	-	2687	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	-28	8145	-9	-560	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	1	NA	TRUE	NA	NA	NA	C	coding	808	2424	263	2686	45.0	0	True	NA	NA
PB.2562.25	chr12	-	3038	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	33	7733	33	-148	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	2	NA	TRUE	NA	NA	NA	C	coding	945	2835	202	3036	55.0	0	True	NA	NA
PB.10810.1	chr7	-	4533	24	full-splice_match	AASS	ENST00000417368.6	3163	24	-6	-1364	-6	769	multi-exon	FALSE	canonical	1	88204	junction_11	56475.674564640576	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	142	2922	90.0	21	False	NA	NA
PB.943.8	chr1	-	2169	6	novel_in_catalog	GAS5	novel	542	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	189239	junction_5	1271036.8680992066	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	1833	2153	15.0	-3	True	AATAAA	-13
PB.2562.29	chr12	-	2004	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	-29	8829	-10	824	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1740	264	2003	65.0	-1	True	NA	NA
PB.2562.28	chr12	-	2293	11	incomplete-splice_match	SCAF11	ENST00000369367.7	7543	15	-27	8538	-8	-953	3prime_fragment	FALSE	canonical	1	286070	junction_8	65984.31966732703	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2031	262	2292	60.0	1	True	ACTAAA	-27
PB.10202.8	chr6	+	4734	13	novel_in_catalog	TRMT11	novel	1565	13	NA	NA	12	-4	intron_retention	FALSE	canonical	1	17062	junction_7	94972.21676217852	NA	15	1	TRUE	NA	NA	NA	C	coding	230	693	14	706	35.0	-2	True	AATAAA	-18
PB.10383.5	chr7	-	1939	5	novel_in_catalog	ACTB	novel	1921	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	24220759	junction_3	10852253.551467938	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	348	1346	40.0	-1	True	AATAAA	-14
PB.10383.4	chr7	-	2341	4	novel_in_catalog	ACTB	novel	1921	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	16600346	junction_2	15126819.100818086	NA	2	NA	TRUE	NA	NA	NA	C	coding	155	468	892	1359	40.0	-1	True	AATAAA	-14
PB.10383.7	chr7	-	1467	6	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	78	junction_3	18952067.28534573	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	426	875	45.0	-1	True	AATAAA	-13
PB.10383.6	chr7	-	1594	7	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	17399738.864621338	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	85	1245	45.0	-1	True	AATAAA	-13
PB.9171.5	chr5	-	2741	6	full-splice_match	SLC45A2	ENST00000382102.7	2723	6	-21	3	-18	-3	multi-exon	FALSE	canonical	1	17090	junction_4	2788.0286512157654	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	80	1462	20.0	-9	True	NA	NA
PB.9171.4	chr5	-	1711	7	full-splice_match	SLC45A2	ENST00000296589.8	1772	7	67	-6	-19	6	multi-exon	FALSE	canonical	1	14573	junction_1	3191.4478776184883	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	81	1673	35.0	-10	True	AATAAA	-30
PB.10383.3	chr7	-	2380	4	novel_in_catalog	ACTB	novel	1921	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	33505074	junction_3	8229821.46935628	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	1026	1787	40.0	-1	True	AATAAA	-14
PB.10383.2	chr7	-	1574	5	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_4	20252980.03940317	NA	2	1	TRUE	NA	NA	NA	C	coding	294	885	97	981	40.0	0	True	AATAAA	-14
PB.10383.9	chr7	-	1100	4	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	23064430.731078047	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	185	508	45.0	-1	True	AATAAA	-13
PB.8123.1	chr3	-	3723	23	novel_in_catalog	UBA7	novel	3299	24	NA	NA	-9	1	intron_retention	TRUE	canonical	1	217725	junction_11	93791.28296405476	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	1498	3621	35.0	-10	True	NA	NA
PB.9250.1	chr5	-	4471	5	full-splice_match	SREK1IP1	ENST00000513458.8	6876	5	23	2382	-13	-2382	multi-exon	FALSE	canonical	1	81404	junction_2	83540.53228523266	NA	2	NA	TRUE	NA	NA	NA	C	coding	155	468	146	613	75.0	0	True	NA	NA
PB.1257.1	chr1	+	1778	1	antisense	novelGene_SH3BP5L_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.9250.3	chr5	-	3591	6	novel_in_catalog	SREK1IP1	novel	6876	5	NA	NA	-13	-3339	combination_of_known_junctions	FALSE	canonical	1	19507	junction_4	93583.38013002096	NA	14	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.9250.2	chr5	-	4289	5	full-splice_match	SREK1IP1	ENST00000513458.8	6876	5	43	2544	7	-2544	multi-exon	FALSE	canonical	1	81404	junction_2	83540.53228523266	NA	3	NA	TRUE	NA	NA	NA	C	coding	155	468	126	593	60.0	20	True	NA	NA
PB.9250.5	chr5	-	3286	5	full-splice_match	SREK1IP1	ENST00000513458.8	6876	5	-14	3604	-14	-3604	multi-exon	FALSE	canonical	1	81404	junction_2	83540.53228523266	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	183	650	30.0	-9	True	AATAAA	-23
PB.9250.4	chr5	-	3516	5	full-splice_match	SREK1IP1	ENST00000513458.8	6876	5	21	3339	-15	-3339	multi-exon	FALSE	canonical	1	81404	junction_2	83540.53228523266	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	148	615	70.0	-2	True	NA	NA
PB.9250.7	chr5	-	1696	5	full-splice_match	SREK1IP1	ENST00000513458.8	6876	5	22	5158	-14	4369	multi-exon	FALSE	canonical	1	81404	junction_2	83540.53228523266	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	147	614	60.0	-1	True	AGTAAA	-8
PB.9250.6	chr5	-	2858	5	full-splice_match	SREK1IP1	ENST00000513458.8	6876	5	35	3983	-1	-3983	multi-exon	FALSE	canonical	1	81404	junction_2	83540.53228523266	NA	13	NA	TRUE	NA	NA	NA	C	coding	155	468	134	601	35.0	12	True	AATAAA	-16
PB.9250.8	chr5	-	2343	2	incomplete-splice_match	SREK1IP1	ENST00000495198.6	816	4	-36	24500	-6	-11035	3prime_fragment	FALSE	canonical	1	310949	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	7	True	NA	NA
PB.943.6	chr1	-	2349	5	full-splice_match	GAS5	ENST00000443799.5	897	5	-1	-1451	1	0	multi-exon	FALSE	canonical	1	189239	junction_4	1308312.0306151167	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-13
PB.10238.1	chr6	+	8975	34	full-splice_match	ARFGEF3	ENST00000251691.4	14877	34	38	5864	38	-5864	multi-exon	FALSE	canonical	1	45271	junction_1	20015.913852479036	NA	0	NA	TRUE	NA	NA	NA	A	coding	2177	6534	129	6662	100.0	20	True	NA	NA
PB.992.6	chr1	-	3283	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	28	1081	28	874	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	251	2443	5.0	-1	True	AGTAAA	-23
PB.998.28	chr1	-	2192	18	novel_not_in_catalog	TPR	novel	9708	51	NA	NA	71	-1666	any annotated donor/acceptor	FALSE	canonical	1	604	junction_4	147543.6789866428	NA	0	NA	TRUE	NA	NA	NA	B	coding	655	1965	227	2191	75.0	-2	True	NA	NA
PB.103.1	chr1	+	3756	10	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	-20377	-1	any annotated donor/acceptor	FALSE	canonical	1	729	junction_1	144285.38429262035	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	317	1549	5.0	-6928	False	AATAAA	-21
PB.998.23	chr1	-	2648	18	incomplete-splice_match	TPR	ENST00000367478.8	9708	51	-17	42036	-17	183	3prime_fragment	FALSE	canonical	1	379424	junction_17	79273.38887170242	NA	0	NA	TRUE	NA	NA	NA	B	coding	778	2334	315	2648	20.0	391	False	NA	NA
PB.998.22	chr1	-	2914	21	incomplete-splice_match	TPR	ENST00000367478.8	9708	51	64	38666	64	1105	3prime_fragment	FALSE	canonical	1	379424	junction_20	75830.3149240955	NA	1	NA	TRUE	NA	NA	NA	B	coding	893	2679	234	2912	70.0	-9	True	NA	NA
PB.998.21	chr1	-	3256	23	novel_not_in_catalog	TPR	novel	9708	51	NA	NA	77	5226	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	132891.14637695078	NA	0	NA	TRUE	NA	NA	NA	B	coding	633	1902	221	2122	60.0	4	True	NA	NA
PB.8123.4	chr3	-	3795	21	novel_in_catalog	UBA7	novel	3299	24	NA	NA	6	-4	intron_retention	FALSE	canonical	1	61745	junction_7	113923.40498785797	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	1875	3698	35.0	19	True	NA	NA
PB.998.27	chr1	-	2362	18	novel_not_in_catalog	TPR	novel	9708	51	NA	NA	74	-1664	any annotated donor/acceptor	FALSE	canonical	1	2338	junction_3	186654.9814517717	NA	1	NA	TRUE	NA	NA	NA	B	coding	605	1818	224	2041	80.0	1	True	NA	NA
PB.6509.10	chr2	+	2067	1	novel_in_catalog	SLC1A4	novel	766	6	NA	NA	336	-14704	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.943.1	chr1	-	1695	8	novel_in_catalog	GAS5	novel	542	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	189239	junction_7	1079975.0216569733	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	1357	1677	15.0	-2	True	AATAAA	-15
PB.5593.5	chr19	+	1897	2	novel_in_catalog	GADD45B	novel	2007	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	996528	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-16
PB.4803.1	chr17	-	4942	19	full-splice_match	SREBF1	ENST00000261646.9	4178	19	-28	-736	-28	19	multi-exon	TRUE	canonical	1	283007	junction_18	161929.15039936983	NA	2	NA	TRUE	NA	NA	NA	C	coding	1147	3444	214	3657	35.0	-9	True	AATAAA	-28
PB.4803.2	chr17	-	4156	19	full-splice_match	SREBF1	ENST00000261646.9	4178	19	16	6	1	-6	multi-exon	FALSE	canonical	1	283007	junction_18	161929.15039936983	NA	1	NA	TRUE	NA	NA	NA	C	coding	1147	3444	170	3613	10.0	-1	True	ATTAAA	-16
PB.4803.3	chr17	-	4148	19	novel_in_catalog	SREBF1	novel	1230	5	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	1	24280	junction_16	217217.66146883098	NA	10	NA	TRUE	NA	NA	NA	C	coding	1145	3438	168	3605	10.0	1	True	ATTAAA	-16
PB.5593.1	chr19	+	1609	3	full-splice_match	GADD45B	ENST00000587345.1	765	3	-23	-821	-2	-2	multi-exon	FALSE	canonical	1	996342	junction_1	99519.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	176	531	235	765	5.0	-2	True	AATAAA	-14
PB.5054.1	chr17	-	4458	16	full-splice_match	MAP3K14	ENST00000344686.7	4430	16	-28	0	-16	0	multi-exon	FALSE	canonical	1	78213	junction_11	22899.137845391084	NA	2	NA	TRUE	NA	NA	NA	A	coding	947	2844	107	2950	10.0	-29	True	AATAAA	-23
PB.5593.3	chr19	+	2131	1	full-splice_match	GADD45B	ENST00000586759.1	517	1	5	-1619	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-14
PB.2770.16	chr12	-	1862	15	full-splice_match	NAP1L1	ENST00000618691.4	13505	15	263	11380	-35	0	multi-exon	FALSE	canonical	1	954408	junction_4	1405557.257375595	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	225	1400	65.0	848	False	NA	NA
PB.4803.8	chr17	-	4259	20	full-splice_match	SREBF1	ENST00000355815.8	4253	20	-13	7	2	-7	multi-exon	FALSE	canonical	1	5498	junction_19	217150.89244392051	NA	1	NA	TRUE	NA	NA	NA	C	coding	1177	3534	184	3717	10.0	3144	False	ATTAAA	-15
PB.4803.9	chr17	-	4043	18	novel_in_catalog	SREBF1	novel	1230	5	NA	NA	1	-7	combination_of_known_junctions	TRUE	canonical	1	7688	junction_1	223880.57794477354	NA	3	NA	TRUE	NA	NA	NA	C	coding	1168	3507	170	3676	10.0	-1	True	ATTAAA	-15
PB.10696.8	chr7	+	1739	10	novel_in_catalog	AC004922.1	novel	2430	17	NA	NA	48364	126	no_combination_of_known_junctions	FALSE	canonical	1	7829	junction_1	1072395.813500999	NA	0	NA	TRUE	NA	NA	NA	B	coding	372	1119	331	1449	100.0	3	True	AATAAA	-13
PB.7466.1	chr21	-	1411	5	full-splice_match	BTG3	ENST00000348354.6	1456	5	46	-1	44	1	multi-exon	FALSE	canonical	1	112474	junction_4	154505.34423200384	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	212	970	10.0	-1	True	AATAAA	-20
PB.1673.6	chr10	+	1661	9	novel_in_catalog	FAM45A	novel	992	2	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	78	junction_3	32148.587627413744	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	396	1136	95.0	-12	True	NA	NA
PB.103.5	chr1	+	3112	11	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	-18	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_10	143072.16086101448	NA	3	1	TRUE	NA	NA	NA	C	coding	461	1386	108	1493	5.0	-6	True	AATAAA	-20
PB.3152.2	chr13	-	2753	15	full-splice_match	RUBCNL	ENST00000429979.5	3979	15	259	967	-6	0	multi-exon	FALSE	canonical	1	16295	junction_14	67612.3574835976	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	347	2335	15.0	10	True	NA	NA
PB.3152.1	chr13	-	2655	14	novel_in_catalog	RUBCNL	novel	3206	13	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	21004	junction_13	62042.37291442092	NA	1	NA	TRUE	NA	NA	NA	C	coding	662	1989	242	2230	5.0	-1	True	NA	NA
PB.5654.1	chr19	-	5099	41	full-splice_match	C3	ENST00000245907.10	5263	41	32	132	0	-1	multi-exon	TRUE	canonical	1	1011863	junction_40	1193453.9961157572	NA	0	NA	TRUE	NA	NA	NA	C	coding	1663	4992	62	5053	10.0	-1	True	GATAAA	-17
PB.11516.18	chr9	-	2920	17	novel_in_catalog	VCP	novel	4370	17	NA	NA	-1	-83	combination_of_known_junctions	FALSE	canonical	1	21742	junction_16	856016.8175219288	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	471	2756	70.0	-4	True	NA	NA
PB.103.7	chr1	+	3419	10	full-splice_match	TNFRSF1B	ENST00000376259.6	3683	10	-17	281	-17	-281	multi-exon	FALSE	canonical	1	190458	junction_1	102960.58930388108	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	107	1492	70.0	-5	True	NA	NA
PB.1673.1	chr10	+	2228	9	novel_in_catalog	FAM45A	novel	992	2	NA	NA	-21	-123	intron_retention	TRUE	canonical	1	78	junction_3	32148.587627413744	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	432	1172	40.0	-48	False	NA	NA
PB.1673.2	chr10	+	2470	9	full-splice_match	FAM45A	ENST00000361432.2	1648	9	-34	-788	-3	-1	multi-exon	FALSE	canonical	1	78	junction_3	12964.833162732948	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	61	1134	20.0	-30	True	AATAAA	-22
PB.9165.2	chr5	-	2544	16	full-splice_match	MTMR12	ENST00000382142.7	5187	16	22	2621	0	-19	multi-exon	FALSE	canonical	1	149901	junction_15	34102.22903369612	NA	2	NA	TRUE	NA	NA	NA	C	coding	747	2244	150	2393	30.0	0	True	AATAAA	-31
PB.2770.10	chr12	-	2274	17	novel_not_in_catalog	NAP1L1	novel	13505	15	NA	NA	-211	150	any annotated donor/acceptor	FALSE	canonical	1	117	junction_15	1610004.237899458	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	789	1964	85.0	374	False	AAGAAA	-44
PB.6492.1	chr2	-	2313	14	full-splice_match	CCT4	ENST00000394440.7	2520	14	177	30	44	6	multi-exon	FALSE	canonical	1	1572181	junction_12	598334.2419182851	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	121	1740	55.0	28	True	AATAAA	-21
PB.3175.3	chr13	+	3252	3	full-splice_match	FAM124A	ENST00000615498.4	2383	3	38	-907	1	907	multi-exon	FALSE	canonical	1	25400	junction_1	3859.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	131	1036	30.0	1	True	GATAAA	-26
PB.3175.2	chr13	+	4282	4	full-splice_match	FAM124A	ENST00000322475.12	4761	4	5	474	1	-474	multi-exon	FALSE	canonical	1	25400	junction_1	3179.983962223709	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	131	1771	100.0	1	True	AATGAA	-40
PB.3175.1	chr13	+	2025	4	full-splice_match	FAM124A	ENST00000322475.12	4761	4	-23	2759	10	2	multi-exon	TRUE	canonical	1	25400	junction_1	3179.983962223709	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	159	1799	45.0	-3669	False	AATAAA	-20
PB.11646.11	chr9	-	4601	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	0	2	intron_retention	FALSE	canonical	1	1486	junction_34	404642.8917450667	NA	0	NA	TRUE	NA	NA	NA	C	coding	1262	3789	349	4137	40.0	0	True	AATAAA	-14
PB.2031.1	chr11	-	2898	32	full-splice_match	MAP4K2	ENST00000294066.6	7178	32	28	4252	14	-29	multi-exon	FALSE	canonical	1	116557	junction_31	74358.68207189596	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	65	2527	30.0	-23	True	NA	NA
PB.2031.3	chr11	-	2904	32	full-splice_match	MAP4K2	ENST00000377350.7	2931	32	28	-1	14	1	multi-exon	FALSE	canonical	1	18417	junction_14	87516.81575430607	NA	1	NA	TRUE	NA	NA	NA	C	coding	812	2439	65	2503	5.0	-23	True	ATTAAA	-16
PB.2031.2	chr11	-	2884	31	novel_in_catalog	MAP4K2	novel	7178	32	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	1	13311	junction_25	88425.91381251815	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	551	2482	5.0	-21	True	ATTAAA	-17
PB.2031.5	chr11	-	2517	31	novel_not_in_catalog	MAP4K2	novel	7178	32	NA	NA	389	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83635.49346377344	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	82	2277	5.0	-4	True	ATTAAA	-14
PB.10351.5	chr7	+	2208	6	full-splice_match	DNAAF5	ENST00000403952.3	1907	6	130	-431	130	0	multi-exon	FALSE	canonical	1	12379	junction_1	148226.4824956728	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	544	1386	15.0	NA	False	ATTAAA	-15
PB.2031.7	chr11	-	2513	31	novel_not_in_catalog	MAP4K2	novel	7178	32	NA	NA	360	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83635.49346377344	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	111	2306	5.0	8082	False	ATTAAA	-13
PB.2031.6	chr11	-	2670	32	novel_not_in_catalog	MAP4K2	novel	7178	32	NA	NA	-33	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	84733.37245523676	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	273	2468	5.0	7689	False	ATTAAA	-13
PB.8755.15	chr4	+	3547	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	17	3918	8	1797	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	403	1092	35.0	0	True	ATTAAA	-14
PB.745.3	chr1	+	5401	10	full-splice_match	ZNF687	ENST00000324048.9	5378	10	-22	-1	2	1	multi-exon	FALSE	canonical	1	5584	junction_1	120086.27471114257	NA	0	NA	TRUE	NA	NA	NA	C	coding	1237	3714	993	4706	10.0	-9	True	ATTAAA	-22
PB.852.9	chr1	-	4574	32	novel_in_catalog	COPA	novel	5175	32	NA	NA	6	-1	no_combination_of_known_junctions	FALSE	canonical	1	205	junction_29	386384.20993341715	NA	4	NA	TRUE	NA	NA	NA	C	coding	1197	3594	98	3691	15.0	-21	True	AATAAA	-20
PB.8325.1	chr3	+	2387	1	antisense	novelGene_GSK3B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.5927.1	chr19	+	1618	10	full-splice_match	USF2	ENST00000222305.7	1634	10	23	-7	-14	-2	multi-exon	FALSE	canonical	1	328443	junction_1	913777.6139060191	NA	1	NA	TRUE	NA	NA	NA	A	coding	346	1041	15	1055	5.0	-20	True	AATAAA	-26
PB.7225.11	chr20	+	1554	12	full-splice_match	HM13	ENST00000340852.9	1606	12	30	22	1	4	multi-exon	FALSE	canonical	1	1224215	junction_1	390696.34068702435	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	95	1228	5.0	16	True	ATTAAA	-20
PB.11503.6	chr9	+	3514	16	full-splice_match	NFX1	ENST00000318524.6	3513	16	-5	4	-5	-4	multi-exon	FALSE	canonical	1	161496	junction_15	63844.51143151531	NA	33	3	TRUE	NA	NA	NA	C	coding	833	2502	34	2535	45.0	13	True	NA	NA
PB.11646.17	chr9	-	4270	33	novel_in_catalog	IARS	novel	4656	34	NA	NA	-3	2	intron_retention	FALSE	canonical	1	8224	junction_29	382744.8373788612	NA	0	NA	TRUE	NA	NA	NA	C	coding	1084	3255	552	3806	40.0	-9	True	AATAAA	-14
PB.12085.6	chrX	+	2882	14	novel_not_in_catalog	MAGED1	novel	2701	13	NA	NA	56	0	any annotated donor/acceptor	FALSE	canonical	1	1285	junction_1	632490.6142904252	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	331	2667	20.0	-13	True	AATAAA	-19
PB.12085.7	chrX	+	2699	13	full-splice_match	MAGED1	ENST00000326587.11	2747	13	37	11	0	-6	multi-exon	FALSE	canonical	1	825891	junction_1	314838.5723808843	NA	16	1	TRUE	NA	NA	NA	C	coding	778	2337	154	2490	35.0	11	True	AATAAA	-13
PB.12085.4	chrX	+	2648	13	full-splice_match	MAGED1	ENST00000375772.7	2701	13	55	-2	55	-1	multi-exon	FALSE	canonical	1	164754	junction_1	466136.31841610547	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	93	2429	10.0	-14	True	AATAAA	-23
PB.12085.5	chrX	+	2718	14	novel_not_in_catalog	MAGED1	novel	2701	13	NA	NA	55	0	any annotated donor/acceptor	FALSE	canonical	1	4961	junction_1	632451.2607319679	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	167	2503	20.0	-14	True	AATAAA	-19
PB.12085.2	chrX	+	2697	14	novel_not_in_catalog	MAGED1	novel	2701	13	NA	NA	53	-6	any annotated donor/acceptor	FALSE	canonical	1	8479	junction_1	631259.8513174752	NA	34	2	TRUE	NA	NA	NA	C	coding	778	2337	152	2488	35.0	-16	True	AATAAA	-13
PB.12085.3	chrX	+	2851	12	incomplete-splice_match	MAGED1	ENST00000375772.7	2701	13	55	2	55	0	intron_retention	FALSE	canonical	1	164754	junction_1	434226.3163128509	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	93	2429	20.0	-14	True	AATAAA	-19
PB.7944.1	chr3	-	1600	4	full-splice_match	RPL32	ENST00000429711.6	2117	4	47	470	2	-9	multi-exon	FALSE	canonical	1	2966867	junction_1	4353853.848477717	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	54	461	25.0	4	True	CATAAA	-13
PB.12085.1	chrX	+	2566	12	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	52	0	no_combination_of_known_junctions	FALSE	canonical	1	8633	junction_1	524432.469348273	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	93	2351	20.0	-17	True	AATAAA	-19
PB.12085.8	chrX	+	2945	12	incomplete-splice_match	MAGED1	ENST00000326587.11	2747	13	6	3	6	0	intron_retention	FALSE	canonical	1	825891	junction_1	258825.54963038536	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	185	2521	10.0	-3262	False	AATAAA	-21
PB.12085.9	chrX	+	3063	11	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	-14	0	intron_retention	FALSE	canonical	1	825891	junction_1	344139.7322681733	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	168	2045	20.0	-3	True	AATAAA	-19
PB.5786.5	chr19	-	1229	3	full-splice_match	DNAJB1	ENST00000254322.2	2264	3	26	1009	26	-130	multi-exon	FALSE	canonical	1	830647	junction_2	239672.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	46	1068	25.0	-1	True	NA	NA
PB.5786.4	chr19	-	2151	4	novel_in_catalog	DNAJB1	novel	2264	3	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	5016	junction_2	614945.2006806966	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	259	981	15.0	0	True	ATTAAA	-18
PB.261.2	chr1	-	1622	7	full-splice_match	ZBTB8OS	ENST00000373501.6	598	7	-19	-1005	5	-5	multi-exon	FALSE	canonical	1	61993	junction_5	135825.1900471092	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	253	585	30.0	0	True	AATAAA	-14
PB.5786.1	chr19	-	2820	3	full-splice_match	DNAJB1	ENST00000254322.2	2264	3	25	-581	25	581	multi-exon	FALSE	canonical	1	830647	junction_2	239672.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	47	1069	35.0	-2	True	TATAAA	-17
PB.5786.3	chr19	-	2240	3	full-splice_match	DNAJB1	ENST00000254322.2	2264	3	24	0	24	0	multi-exon	FALSE	canonical	1	830647	junction_2	239672.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	48	1070	15.0	-3	True	ATTAAA	-18
PB.5786.2	chr19	-	2535	2	incomplete-splice_match	DNAJB1	ENST00000596075.1	573	4	10855	-1949	24	0	5prime_fragment	FALSE	canonical	1	830647	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	273	822	48	869	15.0	-3	True	ATTAAA	-18
PB.3432.23	chr14	+	2911	3	incomplete-splice_match	FRMD6	ENST00000553556.2	1679	5	4693	-1661	4693	0	5prime_fragment	FALSE	canonical	1	383068	junction_1	58798.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	10	510	75.0	-7319	False	NA	NA
PB.5854.5	chr19	+	2574	10	novel_in_catalog	ARMC6	novel	2383	8	NA	NA	-1	-9	combination_of_known_junctions	FALSE	canonical	1	3153	junction_2	228760.60704248108	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	603	2033	20.0	29	True	AATAAA	-14
PB.5854.4	chr19	+	3023	9	novel_not_in_catalog	ARMC6	novel	2383	8	NA	NA	1	-9	any annotated donor/acceptor	FALSE	canonical	1	13736	junction_6	221206.2328433582	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	482	1525	20.0	-6	True	AATAAA	-14
PB.3161.8	chr13	-	2933	13	novel_not_in_catalog	RCBTB2	novel	3232	15	NA	NA	100	4	any annotated donor/acceptor	FALSE	canonical	1	598	junction_6	60050.79512026788	NA	3	NA	TRUE	NA	NA	NA	C	coding	219	660	1129	1788	25.0	-1	True	AATAAA	-21
PB.3161.9	chr13	-	3399	1	novel_in_catalog	RCBTB2	novel	3232	15	NA	NA	205	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	8494	False	AATAAA	-17
PB.5854.1	chr19	+	2153	9	full-splice_match	ARMC6	ENST00000535612.5	2488	9	326	9	-8	-9	multi-exon	FALSE	canonical	1	61010	junction_1	189765.72176222317	NA	40	3	TRUE	NA	NA	NA	C	coding	476	1431	182	1612	20.0	0	True	AATAAA	-14
PB.9445.15	chr5	-	1440	6	incomplete-splice_match	AFF4	ENST00000491831.5	1667	7	-99	513	5	-513	3prime_fragment	FALSE	canonical	1	229244	junction_5	28522.297126283498	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1080	360	1439	35.0	-9	True	NA	NA
PB.3161.4	chr13	-	2909	13	novel_in_catalog	RCBTB2	novel	3232	15	NA	NA	100	5	no_combination_of_known_junctions	FALSE	canonical	1	1765	junction_12	51081.59119725085	NA	7	NA	TRUE	NA	NA	NA	C	coding	556	1671	93	1763	25.0	-1	True	AATAAA	-22
PB.3161.5	chr13	-	2005	6	novel_not_in_catalog	RCBTB2	novel	3232	15	NA	NA	-12091	5	any annotated donor/acceptor	FALSE	canonical	1	4234	junction_5	59463.93976318757	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	200	859	25.0	0	True	AATAAA	-22
PB.3161.6	chr13	-	1774	5	novel_not_in_catalog	RCBTB2	novel	3232	15	NA	NA	-10243	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	61452.69023403288	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	47	628	25.0	9233	False	AATAAA	-22
PB.3161.7	chr13	-	1478	2	novel_in_catalog	RCBTB2	novel	3232	15	NA	NA	-58	4	no_combination_of_known_junctions	FALSE	canonical	1	15232	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	24	True	AATAAA	-21
PB.3161.1	chr13	-	3073	15	full-splice_match	RCBTB2	ENST00000344532.7	3232	15	153	6	100	5	multi-exon	FALSE	canonical	1	32639	junction_14	43884.428800753085	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	272	1927	25.0	-1	True	AATAAA	-22
PB.3161.2	chr13	-	3091	14	full-splice_match	RCBTB2	ENST00000430805.6	3179	14	93	-5	17	5	multi-exon	FALSE	canonical	1	5022	junction_11	48032.78227585576	NA	3	NA	TRUE	NA	NA	NA	C	coding	556	1671	275	1945	25.0	2731	False	AATAAA	-22
PB.3161.3	chr13	-	2790	12	full-splice_match	RCBTB2	ENST00000544904.3	2984	12	199	-5	123	5	multi-exon	FALSE	canonical	1	25978	junction_11	36919.8843302451	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	61	1644	25.0	2837	False	AATAAA	-22
PB.635.59	chr1	-	3732	18	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	-6	-36	intron_retention	FALSE	canonical	1	1441617	junction_1	1281004.821851601	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	457	2466	55.0	-11	True	AATAAA	-9
PB.11508.1	chr9	-	3416	8	novel_in_catalog	DCAF12	novel	3667	9	NA	NA	88	0	no_combination_of_known_junctions	FALSE	canonical	1	3313	junction_2	324878.5540957527	NA	17	2	TRUE	NA	NA	NA	C	coding	291	876	255	1130	25.0	-1	True	AATAAA	-16
PB.5755.1	chr19	-	878	3	full-splice_match	TRIR	ENST00000242784.4	970	3	91	1	-13	1	multi-exon	FALSE	canonical	1	2166765	junction_2	398028.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	176	531	28	558	5.0	-3	True	AGTAAA	-20
PB.10923.12	chr7	+	3903	5	full-splice_match	GIMAP8	ENST00000307271.3	4184	5	219	62	219	-62	multi-exon	FALSE	canonical	1	41136	junction_1	15874.767691213627	NA	0	NA	TRUE	NA	NA	NA	A	coding	618	1857	497	2353	60.0	0	True	NA	NA
PB.10838.2	chr7	-	1767	10	full-splice_match	ZC3HC1	ENST00000481503.5	1741	10	4	-30	0	-3	multi-exon	FALSE	canonical	1	7858	junction_4	82611.75580963412	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	20	1399	30.0	-12	True	AATAAA	-10
PB.7492.1	chr21	-	6945	28	full-splice_match	SYNJ1	ENST00000630077.2	6898	28	-39	-8	0	3	multi-exon	FALSE	canonical	1	38532	junction_27	20497.89566361602	NA	1	NA	TRUE	NA	NA	NA	A	coding	1526	4581	126	4706	30.0	9	True	AATAAA	-23
PB.2196.9	chr11	-	3592	4	novel_in_catalog	AP000893.2	novel	433	2	NA	NA	-32739	-15592	no_combination_of_known_junctions	FALSE	canonical	1	6111	junction_2	55500.48959143413	NA	2	NA	TRUE	NA	NA	NA	A	coding	173	522	179	700	25.0	-26	True	AATAAA	-17
PB.2196.8	chr11	-	3820	6	full-splice_match	RAB30	ENST00000533486.5	9929	6	-31	6140	-1	-5	multi-exon	FALSE	canonical	1	7761	junction_5	60440.94800844871	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	323	928	25.0	25	False	AATAAA	-17
PB.7901.9	chr3	+	4411	27	novel_in_catalog	CHL1	novel	8023	28	NA	NA	55	467	combination_of_known_junctions	FALSE	canonical	1	19904	junction_1	23552.997307626832	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	401	3916	50.0	5	True	ATTAAA	-12
PB.2196.1	chr11	-	7961	5	full-splice_match	RAB30	ENST00000527633.5	792	5	25	-7194	0	-1830	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	154	759	95.0	-1	True	CATAAA	-42
PB.1046.5	chr1	-	2802	9	novel_not_in_catalog	CHI3L1	novel	1920	2	NA	NA	3	0	intron_retention	FALSE	canonical	1	28044	junction_1	316958.75044019433	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	124	915	0.0	-1	True	AATAAA	-20
PB.2196.3	chr11	-	7583	5	full-splice_match	RAB30	ENST00000527633.5	792	5	-69	-6722	0	-2302	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	248	853	60.0	-1	True	AATAAA	-19
PB.9365.3	chr5	-	5853	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-31	481	-31	-481	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	7	NA	TRUE	NA	NA	NA	C	coding	359	1080	343	1422	65.0	-35	False	NA	NA
PB.2196.5	chr11	-	4826	5	full-splice_match	RAB30	ENST00000527633.5	792	5	16	-4050	-9	1161	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	163	768	35.0	-10	True	ATTAAA	-8
PB.9365.5	chr5	-	4823	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-1	1481	-1	-1481	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	4	NA	TRUE	NA	NA	NA	C	coding	359	1080	313	1392	30.0	-5	True	AATAAA	-18
PB.2196.7	chr11	-	3720	5	full-splice_match	RAB30	ENST00000527633.5	792	5	-43	-2885	-1	-4	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	222	827	30.0	25	False	AATAAA	-18
PB.9365.7	chr5	-	3254	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	4	3045	4	-3045	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	3	NA	TRUE	NA	NA	NA	C	coding	359	1080	308	1387	5.0	0	True	AATAAA	-11
PB.5323.2	chr17	+	2118	6	full-splice_match	CCDC137	ENST00000329214.12	2468	6	355	-5	-33	0	multi-exon	FALSE	canonical	1	178522	junction_5	28544.437038414333	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	1	918	45.0	-24	True	ATTAAA	-25
PB.5323.1	chr17	+	1619	6	full-splice_match	CCDC137	ENST00000329214.12	2468	6	345	504	-43	-504	multi-exon	FALSE	canonical	1	178522	junction_5	28544.437038414333	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	11	928	65.0	-3618	False	NA	NA
PB.11712.4	chr9	+	6654	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	268240	-33	no_combination_of_known_junctions	FALSE	canonical	1	136664	junction_1	40191.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	863	2592	5	2596	35.0	0	True	NA	NA
PB.7901.2	chr3	+	2410	3	full-splice_match	CHL1	ENST00000481167.5	662	3	-7	-1741	-7	-4	multi-exon	FALSE	canonical	1	6615	junction_2	6644.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	3	323	20.0	1	True	NA	NA
PB.11712.6	chr9	+	4594	4	full-splice_match	AKAP2	ENST00000374525.5	6866	4	0	2272	0	331	multi-exon	FALSE	canonical	1	136664	junction_1	108446.8329366976	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2847	5	2851	20.0	0	True	AATAAA	-18
PB.11712.7	chr9	+	4476	3	full-splice_match	AKAP2	ENST00000495980.1	572	3	-28	-3876	-26	-3	multi-exon	FALSE	canonical	1	2345	junction_1	178240.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	55	168	297	464	25.0	-8732	False	ATTAAA	-25
PB.11712.1	chr9	+	3001	4	full-splice_match	AKAP2	ENST00000374525.5	6866	4	0	3865	0	14	multi-exon	FALSE	canonical	1	136664	junction_1	108446.8329366976	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2847	5	2851	65.0	0	True	AATATA	-9
PB.11712.2	chr9	+	3976	4	full-splice_match	AKAP2	ENST00000374525.5	6866	4	-23	2913	-23	-310	multi-exon	FALSE	canonical	1	136664	junction_1	108446.8329366976	NA	2	NA	TRUE	NA	NA	NA	C	coding	948	2847	28	2874	55.0	-8729	False	AAAAAG	-7
PB.11712.3	chr9	+	6888	4	full-splice_match	AKAP2	ENST00000374525.5	6866	4	-26	4	-26	-4	multi-exon	FALSE	canonical	1	136664	junction_1	108446.8329366976	NA	7	NA	TRUE	NA	NA	NA	C	coding	948	2847	31	2877	25.0	-8732	False	ATTAAA	-24
PB.5258.1	chr17	-	2299	6	full-splice_match	TRIM47	ENST00000254816.5	2266	6	-38	5	-38	-2	multi-exon	FALSE	canonical	1	110797	junction_5	90689.90676365259	NA	0	NA	TRUE	NA	NA	NA	A	coding	638	1917	66	1982	20.0	-1	True	NA	NA
PB.1960.11	chr11	-	7778	18	novel_not_in_catalog	PATL1	novel	4072	19	NA	NA	-48	-6	intron_retention	FALSE	canonical	1	32889	junction_13	120371.4841204361	NA	6	NA	TRUE	NA	NA	NA	C	coding	469	1410	865	2274	35.0	-13	True	AATAAA	-16
PB.1809.11	chr11	+	4936	25	novel_not_in_catalog	IPO7	novel	6191	25	NA	NA	0	-1244	any annotated donor/acceptor	FALSE	canonical	1	10548	junction_4	277739.74465262727	NA	1	NA	TRUE	NA	NA	NA	C	coding	865	2598	651	3248	70.0	0	True	ACTAAA	-9
PB.1809.10	chr11	+	5280	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	30	881	0	-881	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	113	3229	40.0	0	True	AATAAA	-21
PB.1809.12	chr11	+	3636	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	38	2517	7	-2517	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	11	2	TRUE	NA	NA	NA	C	coding	1038	3117	105	3221	30.0	8	True	TATAAA	-26
PB.1809.17	chr11	+	2997	6	incomplete-splice_match	IPO7	ENST00000379719.7	6191	25	51647	882	12483	-882	5prime_fragment	FALSE	canonical	1	329522	junction_4	147035.86125704163	NA	5	NA	TRUE	NA	NA	NA	C	coding	258	777	171	947	40.0	-9870	False	AATAAA	-20
PB.11631.7	chr9	-	5526	27	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	11101	junction_26	86354.65892349354	NA	0	NA	TRUE	NA	NA	NA	C	coding	1495	4488	97	4584	30.0	54	True	AATAAA	-19
PB.5897.8	chr19	-	2139	3	full-splice_match	C19orf12	ENST00000392278.2	895	3	-9	-1235	-9	-5	multi-exon	FALSE	canonical	1	6855	junction_2	21442.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	137	595	40.0	195	False	AATAAA	-10
PB.393.7	chr1	-	4853	18	novel_in_catalog	STIL	novel	5225	18	NA	NA	11	-1	intron_retention	FALSE	canonical	1	29471	junction_12	33654.33860666263	NA	1	1	TRUE	NA	NA	NA	B	coding	1240	3723	138	3860	5.0	17	True	AATAAA	-18
PB.10442.20	chr7	-	5193	3	novel_not_in_catalog	OSBPL3	novel	6760	23	NA	NA	29	-14959	any annotated donor/acceptor	FALSE	canonical	1	5930	junction_1	54299.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	2	334	10.0	-5	True	NA	NA
PB.5897.9	chr19	-	1983	2	full-splice_match	C19orf12	ENST00000392275.1	1188	2	378	-1173	-23	-5	multi-exon	FALSE	canonical	1	3137	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	181	False	AATAAA	-10
PB.393.6	chr1	-	5068	18	novel_in_catalog	STIL	novel	5225	18	NA	NA	12	0	intron_retention	FALSE	canonical	1	1800	junction_17	41460.11621657664	NA	1	NA	TRUE	NA	NA	NA	B	coding	1287	3864	211	4074	10.0	18	True	AATAAA	-19
PB.9975.1	chr6	-	2253	4	novel_in_catalog	KIF6	novel	9082	23	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	1	4152	junction_1	928.8818846094242	NA	1	NA	TRUE	NA	NA	NA	A	coding	115	348	119	466	15.0	-21	True	NA	NA
PB.9505.2	chr5	+	2705	1	full-splice_match	PCDHA10	ENST00000562220.2	12358	1	29	9624	29	-9624	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	844	2535	138	2672	15.0	-17	True	AATATA	-35
PB.8031.1	chr3	+	1035	7	full-splice_match	RPSA	ENST00000301821.10	1171	7	30	106	0	2	multi-exon	FALSE	canonical	1	5632	junction_4	705599.9432406795	NA	0	NA	TRUE	NA	NA	NA	A	coding	295	888	80	967	20.0	-1	True	AATAAA	-14
PB.9505.3	chr5	+	3966	1	full-splice_match	PCDHA10	ENST00000562220.2	12358	1	36	8356	36	-8356	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	844	2535	131	2665	50.0	-10	True	AATATA	-23
PB.2019.3	chr11	+	2565	13	incomplete-splice_match	STIP1	ENST00000305218.8	2196	14	66	-4	-4	4	intron_retention	FALSE	canonical	1	691621	junction_8	546283.0915899016	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	82	1698	10.0	2	True	AATAAA	-29
PB.2019.2	chr11	+	2151	14	novel_not_in_catalog	STIP1	novel	2743	14	NA	NA	-6	4	any annotated donor/acceptor	FALSE	canonical	1	5239	junction_8	617202.9790783637	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	84	1121	10.0	0	True	AATAAA	-29
PB.2019.1	chr11	+	2063	14	full-splice_match	STIP1	ENST00000538945.5	1900	14	-31	-132	-12	-3	multi-exon	FALSE	canonical	1	450	junction_2	569859.7469233655	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	90	1649	15.0	-6	True	AATAAA	-22
PB.393.2	chr1	-	4993	17	novel_in_catalog	STIL	novel	5225	18	NA	NA	-28	0	intron_retention	FALSE	canonical	1	31695	junction_3	31700.08111755197	NA	1	NA	TRUE	NA	NA	NA	B	coding	1270	3813	184	3996	10.0	-1	True	AATAAA	-22
PB.2019.6	chr11	+	2112	14	full-splice_match	STIP1	ENST00000305218.8	2196	14	88	-4	-1	4	multi-exon	FALSE	canonical	1	691621	junction_8	525091.1643165646	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	60	1691	10.0	24	True	AATAAA	-29
PB.2019.5	chr11	+	2082	13	novel_in_catalog	STIP1	novel	2743	14	NA	NA	-7	5	no_combination_of_known_junctions	FALSE	canonical	1	82	junction_10	649611.2789801629	NA	4	1	TRUE	NA	NA	NA	C	coding	428	1287	66	1352	10.0	18	True	AATAAA	-30
PB.2019.4	chr11	+	2097	14	novel_not_in_catalog	STIP1	novel	2743	14	NA	NA	5	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	637084.1467132773	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	825	1682	10.0	11	True	AATAAA	-23
PB.7118.12	chr2	+	3662	9	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	5	0	intron_retention	FALSE	canonical	1	7213	junction_8	92699.21586878445	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	154	885	10.0	5	True	AGTAAA	-17
PB.7118.13	chr2	+	3462	11	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	5	0	intron_retention	FALSE	canonical	1	52479	junction_8	79839.89603299844	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	698	1309	10.0	5	True	AGTAAA	-17
PB.7118.10	chr2	+	3001	9	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	103287	junction_5	60212.765041455285	NA	2	2	TRUE	NA	NA	NA	C	coding	521	1566	596	2161	10.0	0	True	AGTAAA	-17
PB.7118.11	chr2	+	2547	10	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	62387	junction_4	72648.20473494081	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	1045	1707	10.0	0	True	AGTAAA	-17
PB.621.7	chr1	-	3272	5	novel_in_catalog	SLC16A1	novel	3910	5	NA	NA	-32	-511	combination_of_known_junctions	FALSE	canonical	1	5863	junction_4	459047.0154635579	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	242	1744	35.0	1	True	AATAAA	-9
PB.12238.1	chrX	-	3730	3	full-splice_match	NKRF	ENST00000304449.6	3817	3	17	70	17	-64	multi-exon	FALSE	canonical	1	78244	junction_2	47894.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	731	2785	80.0	-3	True	TTTAAA	-30
PB.1797.1	chr11	-	2459	4	novel_in_catalog	ZNF214	novel	2681	3	NA	NA	13	-227	no_combination_of_known_junctions	FALSE	canonical	1	2772	junction_2	4029.555007138574	NA	2	1	TRUE	NA	NA	NA	C	coding	606	1821	367	2187	15.0	-10	True	ATTAAA	-27
PB.12238.3	chrX	-	3261	3	full-splice_match	NKRF	ENST00000304449.6	3817	3	13	543	13	-537	multi-exon	FALSE	canonical	1	78244	junction_2	47894.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	735	2789	45.0	-7	True	AATAAA	-16
PB.12238.4	chrX	-	3179	3	full-splice_match	NKRF	ENST00000304449.6	3817	3	5	633	5	-627	multi-exon	FALSE	canonical	1	78244	junction_2	47894.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	743	2797	35.0	-15	True	AATAAA	-27
PB.12238.5	chrX	-	2863	3	full-splice_match	NKRF	ENST00000304449.6	3817	3	7	947	7	-941	multi-exon	FALSE	canonical	1	78244	junction_2	47894.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	741	2795	25.0	-13	True	ATTAAA	-16
PB.621.1	chr1	-	3750	5	full-splice_match	SLC16A1	ENST00000369626.7	3910	5	158	2	-14	-2	multi-exon	FALSE	canonical	1	712275	junction_4	230041.21876089944	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	206	1708	25.0	-1	True	AATAAA	-16
PB.11724.4	chr9	+	2949	9	novel_in_catalog	HSDL2	novel	3350	11	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	11956	junction_3	212361.29078762064	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	376	1089	30.0	-68	False	NA	NA
PB.844.2	chr1	-	1462	5	novel_not_in_catalog	TAGLN2	novel	1603	5	NA	NA	379	-6	any annotated donor/acceptor	TRUE	canonical	1	26740	junction_4	1279305.640313599	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	176	775	15.0	-3	True	AATAAA	-17
PB.393.9	chr1	-	4956	19	novel_not_in_catalog	STIL	novel	5225	18	NA	NA	11	-1	intron_retention	FALSE	canonical	1	3115	junction_18	46087.18358535534	NA	15	1	TRUE	NA	NA	NA	B	coding	1241	3726	238	3963	5.0	17	True	AATAAA	-18
PB.11724.9	chr9	+	1514	11	full-splice_match	HSDL2	ENST00000398805.7	3350	11	147	1689	4	-1684	multi-exon	FALSE	canonical	1	344539	junction_4	84388.26144440942	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	81	1337	45.0	-24	True	ATTAAA	-15
PB.844.1	chr1	-	1353	5	full-splice_match	TAGLN2	ENST00000368097.8	1604	5	250	1	9	-1	multi-exon	FALSE	canonical	1	1722525	junction_2	584057.6217397132	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	62	661	5.0	-5	True	AATAAA	-22
PB.393.8	chr1	-	4994	17	novel_in_catalog	STIL	novel	5225	18	NA	NA	11	-1	intron_retention	FALSE	canonical	1	52183	junction_3	28915.28229992533	NA	1	NA	TRUE	NA	NA	NA	B	coding	1287	3864	138	4001	5.0	17	True	AATAAA	-18
PB.4311.2	chr16	-	4623	10	novel_in_catalog	GGA2	novel	572	6	NA	NA	-35365	-26074	intron_retention	TRUE	canonical	1	4459	junction_9	97600.69690792983	NA	5	NA	TRUE	NA	NA	NA	C	coding	430	1293	377	1669	85.0	-11	True	NA	NA
PB.11773.3	chr9	-	3255	17	novel_in_catalog	RC3H2	novel	9248	20	NA	NA	16	-14	no_combination_of_known_junctions	FALSE	canonical	1	4956	junction_8	77955.39775187055	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2886	284	3169	45.0	7986	False	AATAAA	-21
PB.4311.1	chr16	-	4545	9	full-splice_match	EARS2	ENST00000449606.5	3961	9	13	-597	2	597	multi-exon	FALSE	canonical	1	96880	junction_8	60524.46653923829	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	20	1591	85.0	-13	True	NA	NA
PB.4311.6	chr16	-	3508	9	full-splice_match	EARS2	ENST00000449606.5	3961	9	-12	465	-12	145	multi-exon	FALSE	canonical	1	96880	junction_8	60524.46653923829	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	45	1616	55.0	-38	False	AAAAAG	-3
PB.4311.7	chr16	-	3559	10	novel_in_catalog	EARS2	novel	3961	9	NA	NA	2	141	intron_retention	FALSE	canonical	1	4459	junction_9	97600.69690792983	NA	3	NA	TRUE	NA	NA	NA	C	coding	430	1293	379	1671	60.0	-13	True	NA	NA
PB.4311.4	chr16	-	3950	9	full-splice_match	EARS2	ENST00000449606.5	3961	9	11	0	0	0	multi-exon	FALSE	canonical	1	96880	junction_8	60524.46653923829	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	22	1593	30.0	-15	True	NA	NA
PB.5262.1	chr17	+	3325	10	full-splice_match	TEN1-CDK3	ENST00000569284.1	3287	10	-40	2	-11	-1	multi-exon	FALSE	canonical	1	70374	junction_4	102694.1975191333	NA	3	NA	TRUE	NA	NA	NA	A	coding	333	1002	1750	2751	10.0	-20	True	AATAAA	-20
PB.8458.4	chr3	-	5339	25	novel_in_catalog	HLTF	novel	5306	25	NA	NA	-1	9	intron_retention	FALSE	canonical	1	41466	junction_6	67635.43155012927	NA	1	NA	TRUE	NA	NA	NA	C	coding	1013	3042	196	3237	20.0	-22	True	AATAAA	-23
PB.2895.6	chr12	-	2181	10	full-splice_match	ANAPC7	ENST00000450008.2	2200	10	20	-1	20	1	multi-exon	FALSE	canonical	1	259630	junction_9	102600.23148819938	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	84	1595	30.0	-47	True	NA	NA
PB.4311.8	chr16	-	3381	9	full-splice_match	EARS2	ENST00000449606.5	3961	9	9	571	-2	39	multi-exon	FALSE	canonical	1	96880	junction_8	60524.46653923829	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	24	1595	45.0	-17	True	AATATA	-13
PB.4311.9	chr16	-	3264	9	full-splice_match	EARS2	ENST00000449606.5	3961	9	-11	708	-11	-98	multi-exon	FALSE	canonical	1	96880	junction_8	60524.46653923829	NA	3	NA	TRUE	NA	NA	NA	C	coding	523	1572	44	1615	15.0	-37	False	NA	NA
PB.2895.3	chr12	-	2224	10	novel_in_catalog	ANAPC7	novel	3045	11	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	1	21385	junction_2	159501.17389884975	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	87	1559	20.0	-50	True	AATAAA	-17
PB.2895.2	chr12	-	2436	11	full-splice_match	ANAPC7	ENST00000455511.7	3045	11	31	578	-10	0	multi-exon	FALSE	canonical	1	259630	junction_10	101860.27334756176	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	73	1770	20.0	-36	True	AATAAA	-18
PB.2895.1	chr12	-	3027	11	full-splice_match	ANAPC7	ENST00000455511.7	3045	11	17	1	17	-1	multi-exon	FALSE	canonical	1	259630	junction_10	101860.27334756176	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	87	1784	15.0	-50	True	AAAAAG	-2
PB.11659.3	chr9	+	2551	10	full-splice_match	PTPDC1	ENST00000375360.7	4517	10	9	1957	9	-13	multi-exon	FALSE	canonical	1	23231	junction_1	15103.482061930677	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2220	332	2551	75.0	-10	True	AAGAAA	-22
PB.1199.2	chr1	-	4216	4	novel_in_catalog	EGLN1	novel	7097	5	NA	NA	-1958	-1	no_combination_of_known_junctions	FALSE	canonical	1	19909	junction_2	261766.9211204672	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	414	1451	15.0	-15	True	ATTAAA	-28
PB.3812.2	chr15	+	2588	13	novel_in_catalog	TMEM62	novel	571	6	NA	NA	67	-11	intron_retention	FALSE	canonical	1	17000	junction_11	40122.60225260611	NA	3	NA	TRUE	NA	NA	NA	C	coding	608	1827	213	2039	45.0	5	True	NA	NA
PB.3812.1	chr15	+	2792	14	full-splice_match	TMEM62	ENST00000260403.6	2771	14	-17	-4	-17	4	multi-exon	TRUE	canonical	1	62512	junction_1	29036.961175910972	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	297	2228	10.0	0	True	NA	NA
PB.152.4	chr1	-	3632	26	novel_in_catalog	USP48	novel	4309	26	NA	NA	29	-1	intron_retention	FALSE	canonical	1	14147	junction_15	140884.25800865618	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	210	3119	30.0	-18	True	AATAAA	-20
PB.1687.11	chr10	-	2115	12	full-splice_match	ATE1	ENST00000423243.5	2031	12	-22	-62	-22	62	multi-exon	FALSE	canonical	1	73519	junction_5	47944.51869910945	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	12	1568	75.0	6	True	AATAGA	-8
PB.1687.10	chr10	-	2184	12	full-splice_match	ATE1	ENST00000369043.7	4900	12	7	2709	7	62	multi-exon	FALSE	canonical	1	115472	junction_2	35622.458749437435	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	81	1637	75.0	-9	True	AATAGA	-8
PB.11415.9	chr8	-	3823	1	novel_in_catalog	ZNF250	novel	677	6	NA	NA	2	-7671	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-7	True	NA	NA
PB.3971.7	chr15	-	3222	13	novel_in_catalog	SEMA7A	novel	3376	14	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	1860	junction_12	181445.25290466787	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	384	1889	5.0	-1	True	AATAAA	-14
PB.3971.6	chr15	-	3332	13	full-splice_match	SEMA7A	ENST00000543145.6	2304	13	-3	-1025	0	-2	multi-exon	FALSE	canonical	1	16742	junction_11	194171.05123575966	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	41	1999	5.0	-1	True	AATAAA	-14
PB.246.6	chr1	-	1956	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16514	-56343	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	395626.4174317596	NA	3	NA	TRUE	NA	NA	NA	B	coding	167	504	857	1360	85.0	12	True	NA	NA
PB.3971.2	chr15	-	3684	13	novel_in_catalog	SEMA7A	novel	3376	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	227915	junction_12	128701.78001690899	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	41	1687	5.0	-1	True	AATAAA	-15
PB.3971.1	chr15	-	3376	14	full-splice_match	SEMA7A	ENST00000261918.9	3376	14	0	0	0	0	multi-exon	FALSE	canonical	1	227915	junction_13	129892.15191396375	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	41	2041	0.0	-1	True	AATAAA	-16
PB.6688.2	chr2	+	2452	17	novel_not_in_catalog	ACOXL	novel	2714	19	NA	NA	-13378	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	6520.109047868275	NA	0	NA	TRUE	NA	NA	NA	B	coding	533	1602	449	2050	85.0	-7	False	NA	NA
PB.11773.4	chr9	-	2642	2	novel_not_in_catalog	RC3H2	novel	5746	22	NA	NA	16	-11436	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	7986	False	NA	NA
PB.11824.6	chr9	+	2857	1	novel_in_catalog	GLE1	novel	3321	16	NA	NA	-2	-26064	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	135	408	78	485	95.0	10	True	NA	NA
PB.3971.8	chr15	-	2639	14	full-splice_match	SEMA7A	ENST00000261918.9	3376	14	0	737	0	0	multi-exon	FALSE	canonical	1	227915	junction_13	129892.15191396375	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	41	2041	20.0	-1	True	AAAAAG	-5
PB.875.2	chr1	+	2795	10	full-splice_match	TOMM40L	ENST00000367988.7	2708	10	54	-141	-3	4	multi-exon	FALSE	canonical	1	23972	junction_1	59559.90211543333	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	243	1142	25.0	-3	True	AGTAAA	-19
PB.3564.2	chr14	+	4466	14	novel_in_catalog	DLST	novel	563	7	NA	NA	0	-6	intron_retention	FALSE	canonical	1	47795	junction_3	134071.9011951529	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	2245	3057	25.0	0	True	ATTAAA	-14
PB.9381.6	chr5	-	4661	9	novel_in_catalog	PJA2	novel	4889	10	NA	NA	23	0	no_combination_of_known_junctions	FALSE	canonical	1	844	junction_7	343359.01155268593	NA	3	NA	TRUE	NA	NA	NA	C	coding	641	1926	218	2143	35.0	2	True	AATAAA	-26
PB.875.3	chr1	+	2510	10	novel_in_catalog	TOMM40L	novel	2807	9	NA	NA	-3	-23	combination_of_known_junctions	FALSE	canonical	1	6149	junction_1	63922.68126068833	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	122	1021	70.0	-3	True	NA	NA
PB.3096.3	chr13	+	2780	11	incomplete-splice_match	BRCA2	ENST00000544455.5	10984	28	28	62732	3	3645	3prime_fragment	FALSE	canonical	1	33452	junction_10	9963.903223134997	NA	0	NA	TRUE	NA	NA	NA	B	coding	860	2580	200	2779	70.0	0	True	AAGAAA	-39
PB.3096.2	chr13	+	4657	11	incomplete-splice_match	BRCA2	ENST00000544455.5	10984	28	28	60855	3	5522	3prime_fragment	FALSE	canonical	1	33452	junction_10	9963.903223134997	NA	2	NA	TRUE	NA	NA	NA	B	coding	1486	4458	200	4657	65.0	0	True	AAGAAA	-44
PB.3096.1	chr13	+	1980	10	incomplete-splice_match	BRCA2	ENST00000544455.5	10984	28	-4	66441	2	-64	3prime_fragment	FALSE	canonical	1	37869	junction_2	9209.304342301637	NA	0	NA	TRUE	NA	NA	NA	B	coding	583	1749	232	1980	70.0	-32	True	NA	NA
PB.1606.1	chr10	+	3404	5	full-splice_match	TWNK	ENST00000311916.7	3621	5	216	1	-43	-1	multi-exon	FALSE	canonical	1	125958	junction_4	28075.789169674288	NA	3	NA	TRUE	NA	NA	NA	C	coding	663	1992	523	2514	0.0	-9365	False	ACTAAA	-14
PB.1606.2	chr10	+	3663	5	full-splice_match	TWNK	ENST00000370228.2	3665	5	3	-1	3	1	multi-exon	FALSE	canonical	1	32418	junction_4	61991.253919403825	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	736	2421	0.0	-4	True	ACTAAA	-16
PB.1606.3	chr10	+	3794	4	novel_in_catalog	TWNK	novel	838	5	NA	NA	2	-1	intron_retention	FALSE	canonical	1	125958	junction_3	28729.767083404393	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	2212	2904	0.0	9	True	ACTAAA	-14
PB.875.1	chr1	+	2660	10	full-splice_match	TOMM40L	ENST00000367988.7	2708	10	56	-8	-1	0	multi-exon	FALSE	canonical	1	23972	junction_1	59559.90211543333	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	241	1140	50.0	-1	True	NA	NA
PB.6688.1	chr2	+	2370	7	incomplete-splice_match	ACOXL	ENST00000340561.8	2188	11	-120	87377	-59	4459	3prime_fragment	TRUE	canonical	1	9660	junction_1	4571.525262122284	NA	2	1	TRUE	NA	NA	NA	B	coding	228	687	284	970	75.0	-101	False	NA	NA
PB.875.6	chr1	+	2459	8	full-splice_match	TOMM40L	ENST00000492482.5	1120	8	-22	-1317	0	3	multi-exon	FALSE	canonical	1	4005	junction_3	85673.30976185652	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	240	944	45.0	0	True	NA	NA
PB.11824.3	chr9	+	3547	16	full-splice_match	GLE1	ENST00000309971.8	3321	16	8	-234	8	234	multi-exon	FALSE	canonical	1	173513	junction_1	72400.70823306144	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	99	2195	40.0	-11	True	ATTAAA	-8
PB.1787.1	chr11	-	2834	12	full-splice_match	TRIM3	ENST00000345851.7	2879	12	46	-1	-15	0	multi-exon	TRUE	canonical	1	43351	junction_11	35682.91985166707	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	186	2420	5.0	-8	True	AATAAA	-14
PB.1787.2	chr11	-	3894	11	novel_in_catalog	TRIM3	novel	1654	2	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	19603	junction_8	48020.930741604745	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	543	2330	10.0	29	True	AATAAA	-12
PB.1787.3	chr11	-	3501	1	novel_in_catalog	TRIM3	novel	3044	12	NA	NA	2	-12283	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	9	True	NA	NA
PB.2539.1	chr12	-	4255	13	full-splice_match	PKP2	ENST00000340811.8	4302	13	44	3	-40	-3	multi-exon	FALSE	canonical	1	11008	junction_12	51983.8830188956	NA	0	NA	TRUE	NA	NA	NA	A	coding	837	2514	66	2579	25.0	-28	True	AATAAA	-33
PB.875.4	chr1	+	2563	9	novel_in_catalog	TOMM40L	novel	2807	9	NA	NA	-2	3	no_combination_of_known_junctions	FALSE	canonical	1	2840	junction_3	80502.94100130364	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	242	1048	45.0	-2	True	NA	NA
PB.875.5	chr1	+	2602	10	novel_not_in_catalog	TOMM40L	novel	2807	9	NA	NA	0	-23	any annotated donor/acceptor	FALSE	canonical	1	2505	junction_6	75881.63278634025	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	240	866	70.0	0	True	NA	NA
PB.3824.1	chr15	-	1810	11	novel_not_in_catalog	ELL3	novel	2352	11	NA	NA	-64	-27	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	47308.500388830755	NA	1	1	TRUE	NA	NA	NA	A	coding	282	849	478	1326	55.0	-67	False	AATGAA	-18
PB.7253.3	chr20	-	2670	16	novel_in_catalog	GGT7	novel	2642	15	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	2427	junction_15	87011.48941441903	NA	1	NA	TRUE	NA	NA	NA	C	coding	679	2040	25	2064	25.0	16	True	ATTAAA	-16
PB.875.8	chr1	+	2663	10	novel_in_catalog	TOMM40L	novel	2807	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	6149	junction_1	63922.68126068833	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	116	1015	35.0	3	True	AGTAAA	-14
PB.3965.1	chr15	-	2821	8	novel_not_in_catalog	ADPGK	novel	1820	4	NA	NA	0	0	any annotated donor/acceptor	TRUE	canonical	1	315	junction_6	184005.79743805988	NA	16	2	TRUE	NA	NA	NA	C	coding	375	1128	722	1849	25.0	24	True	ATTAAA	-19
PB.3965.2	chr15	-	2714	7	full-splice_match	ADPGK	ENST00000567941.5	2716	7	2	0	1	0	multi-exon	FALSE	canonical	1	46682	junction_6	144294.52183141105	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	618	1742	25.0	10	True	ATTAAA	-19
PB.3965.3	chr15	-	2269	7	novel_in_catalog	ADPGK	novel	1820	4	NA	NA	122	-1	combination_of_known_junctions	FALSE	canonical	1	236688	junction_6	93866.77393415391	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	171	1298	25.0	244	False	ATTAAA	-18
PB.3965.4	chr15	-	2273	6	novel_in_catalog	ADPGK	novel	1820	4	NA	NA	131	-1	combination_of_known_junctions	FALSE	canonical	1	25218	junction_2	156180.58376840575	NA	2	NA	TRUE	NA	NA	NA	C	coding	196	591	712	1302	25.0	253	False	ATTAAA	-18
PB.3965.5	chr15	-	2495	7	novel_not_in_catalog	ADPGK	novel	1820	4	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	158494.6329484763	NA	6	1	TRUE	NA	NA	NA	C	coding	257	774	750	1523	25.0	19	True	ATTAAA	-19
PB.3965.6	chr15	-	2472	6	novel_in_catalog	ADPGK	novel	1820	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	7001	junction_4	166861.47516140447	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	73	1500	25.0	-24	True	ATTAAA	-19
PB.3965.7	chr15	-	4968	5	novel_in_catalog	ADPGK	novel	1820	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	25218	junction_1	143883.2138402531	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	40	702	25.0	9	True	ATTAAA	-19
PB.3965.8	chr15	-	2046	4	novel_in_catalog	ADPGK	novel	1820	4	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	1	6833	junction_3	120118.78734079121	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	482	1075	25.0	-19	True	ATTAAA	-18
PB.3965.9	chr15	-	2293	6	novel_in_catalog	ADPGK	novel	1820	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	25218	junction_2	129564.46805571347	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	31	693	25.0	18	True	ATTAAA	-16
PB.1947.2	chr11	-	1622	4	full-splice_match	UBE2L6	ENST00000340573.8	1573	4	-51	2	-51	-2	multi-exon	FALSE	canonical	1	51616	junction_3	587745.923749937	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-49	False	ATTAAA	-17
PB.1947.3	chr11	-	2281	1	novel_in_catalog	UBE2L6	novel	1573	4	NA	NA	143	-12925	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-41	True	NA	NA
PB.1947.1	chr11	-	1198	4	full-splice_match	UBE2L6	ENST00000287156.8	1354	4	161	-5	161	-1	multi-exon	FALSE	canonical	1	1230156	junction_1	54101.54657267716	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	48	497	20.0	-23	True	ATTAAA	-18
PB.5466.4	chr18	-	4406	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-169	6838	-9	2218	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	2	NA	TRUE	NA	NA	NA	C	coding	621	1866	170	2035	20.0	-10	True	AATACA	-21
PB.5466.5	chr18	-	4236	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-180	7019	-20	2037	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	181	2046	25.0	-21	True	AGTAAA	-41
PB.5466.6	chr18	-	4252	16	novel_not_in_catalog	PIAS2	novel	11075	14	NA	NA	10	1835	any annotated donor/acceptor	FALSE	canonical	1	10813	junction_2	69194.011889148	NA	8	NA	TRUE	NA	NA	NA	C	coding	563	1692	256	1947	50.0	40	True	AATAAA	-19
PB.5466.7	chr18	-	4206	16	novel_not_in_catalog	PIAS2	novel	11075	14	NA	NA	7	1835	any annotated donor/acceptor	FALSE	canonical	1	5679	junction_14	75858.56361999539	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	377	2218	50.0	8	True	AATAAA	-19
PB.5466.1	chr18	-	5976	13	full-splice_match	PIAS2	ENST00000398654.7	2043	13	-45	-3888	4	3888	multi-exon	FALSE	canonical	1	8800	junction_11	55513.604403873134	NA	7	NA	TRUE	NA	NA	NA	C	coding	331	996	940	1935	25.0	5	True	AATAAA	-28
PB.2525.1	chr12	-	2404	1	full-splice_match	AC022364.1	ENST00000617468.1	2409	1	-2	7	-2	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	643	False	NA	NA
PB.5466.3	chr18	-	4514	15	novel_in_catalog	PIAS2	novel	11075	14	NA	NA	-8	2218	combination_of_known_junctions	FALSE	canonical	1	14288	junction_14	57204.80119799422	NA	4	NA	TRUE	NA	NA	NA	C	coding	612	1839	305	2143	20.0	-9	True	AATACA	-21
PB.5466.8	chr18	-	4125	15	novel_in_catalog	PIAS2	novel	11075	14	NA	NA	-2	1835	combination_of_known_junctions	FALSE	canonical	1	14288	junction_14	57204.80119799422	NA	2	NA	TRUE	NA	NA	NA	C	coding	612	1839	299	2137	50.0	-3	True	AATAAA	-19
PB.5466.9	chr18	-	3987	14	novel_not_in_catalog	PIAS2	novel	11075	14	NA	NA	1	1835	any annotated donor/acceptor	FALSE	canonical	1	8287	junction_1	53739.51306090956	NA	2	NA	TRUE	NA	NA	NA	C	coding	580	1743	160	1902	50.0	0	True	AATAAA	-19
PB.8853.94	chr4	-	4154	1	novel_in_catalog	SEC31A	novel	4104	29	NA	NA	2827	-11656	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	2857	False	AATAAA	-10
PB.5668.1	chr19	-	1848	11	full-splice_match	FCER2	ENST00000597921.5	1560	11	-20	-268	0	245	multi-exon	FALSE	canonical	1	226996	junction_10	284707.9109713146	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	203	1168	20.0	-1	True	NA	NA
PB.5668.2	chr19	-	1453	10	full-splice_match	FCER2	ENST00000360067.8	1482	10	29	0	29	0	multi-exon	FALSE	canonical	1	248460	junction_9	289866.5122206904	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	56	1018	5.0	-10	True	AATAAA	-41
PB.5668.3	chr19	-	1778	10	full-splice_match	FCER2	ENST00000597934.1	1577	10	-15	-186	0	0	multi-exon	FALSE	canonical	1	226996	junction_9	273027.952698783	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	825	1343	5.0	-16	True	AATAAA	-41
PB.5668.4	chr19	-	1582	11	full-splice_match	FCER2	ENST00000597921.5	1560	11	-4	-18	-4	-5	multi-exon	FALSE	canonical	1	226996	junction_10	284707.9109713146	NA	2	1	TRUE	NA	NA	NA	C	coding	321	966	187	1152	5.0	15	True	AATAAA	-36
PB.5668.5	chr19	-	1930	10	full-splice_match	FCER2	ENST00000598803.5	1872	10	-53	-5	0	-1	multi-exon	FALSE	canonical	1	226996	junction_9	297678.07520018815	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	783	1514	15.0	-16	True	AATAAA	-22
PB.5668.6	chr19	-	3703	4	novel_in_catalog	FCER2	novel	1482	10	NA	NA	0	-5458	intron_retention	FALSE	canonical	1	181384	junction_3	426569.1139642229	NA	3	NA	TRUE	NA	NA	NA	C	coding	152	459	1254	1712	100.0	-16	True	NA	NA
PB.5668.7	chr19	-	2164	5	novel_in_catalog	FCER2	novel	1482	10	NA	NA	-9	-5458	intron_retention	FALSE	canonical	1	226996	junction_4	371787.00720061146	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	227	787	100.0	-25	False	NA	NA
PB.8012.7	chr3	+	2285	15	incomplete-splice_match	GOLGA4	ENST00000356847.8	7673	23	29	42910	10	214	3prime_fragment	FALSE	canonical	1	187873	junction_2	96853.45290600808	NA	0	NA	TRUE	NA	NA	NA	B	coding	671	2013	271	2283	60.0	-57	False	NA	NA
PB.181.7	chr1	-	2289	5	novel_in_catalog	RSRP1	novel	1502	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	224035	junction_2	383982.40684372507	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	213	893	30.0	-1	True	AATAAA	-19
PB.6171.1	chr19	-	5946	5	full-splice_match	ZNF649	ENST00000354957.7	3197	5	-38	-2711	-9	2711	multi-exon	FALSE	canonical	1	123884	junction_3	18286.838605606492	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	324	1841	25.0	-12	True	NA	NA
PB.152.5	chr1	-	3649	28	novel_not_in_catalog	USP48	novel	4309	26	NA	NA	41	-21	intron_retention	FALSE	canonical	1	2521	junction_17	202678.03169884894	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	198	1394	35.0	-6	True	AATAAA	-30
PB.8460.1	chr3	+	2111	1	antisense	novelGene_WWTR1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	NA	False	ATTAAA	-39
PB.11275.45	chr8	-	2479	7	full-splice_match	YWHAZ	ENST00000395957.6	5248	7	-406	3175	-1	129	multi-exon	FALSE	canonical	1	9976	junction_2	795380.5754047171	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	749	1486	20.0	-11	True	NA	NA
PB.11275.47	chr8	-	2364	8	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	4	135	any annotated donor/acceptor	FALSE	canonical	1	7593	junction_7	810506.7356881353	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	628	1365	25.0	-6	True	NA	NA
PB.4339.1	chr16	-	2288	12	novel_not_in_catalog	RABEP2	novel	2175	11	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	92997.8692516951	NA	2	1	TRUE	NA	NA	NA	B	coding	483	1452	60	1511	5.0	-3	True	AATAAA	-15
PB.4339.2	chr16	-	2071	11	novel_not_in_catalog	RABEP2	novel	2175	11	NA	NA	-1	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	111786.25721389012	NA	2	1	TRUE	NA	NA	NA	B	coding	412	1239	55	1293	5.0	2	True	AATAAA	-16
PB.4339.3	chr16	-	2197	12	novel_not_in_catalog	RABEP2	novel	2175	11	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	109115.98826300191	NA	3	1	TRUE	NA	NA	NA	B	coding	430	1293	128	1420	5.0	785	False	AATAAA	-15
PB.10717.14	chr7	-	2221	14	novel_not_in_catalog	MCM7	novel	2515	14	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	738151.4267947655	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	124	2070	15.0	503	False	AATAAA	-18
PB.6171.2	chr19	-	5774	5	full-splice_match	ZNF649	ENST00000354957.7	3197	5	-10	-2567	-2	2567	multi-exon	FALSE	canonical	1	123884	junction_3	18286.838605606492	NA	5	NA	TRUE	NA	NA	NA	C	coding	505	1518	296	1813	20.0	-5	True	NA	NA
PB.8470.4	chr3	+	1635	7	full-splice_match	SELENOT	ENST00000477889.5	944	7	-1	-690	-1	393	multi-exon	FALSE	canonical	1	17605	junction_1	208337.2131663392	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	468	881	35.0	-31	True	AATAAA	-26
PB.8470.5	chr3	+	3445	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	33	-9	-7	-1	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	217	630	25.0	0	True	AATAAA	-24
PB.10717.10	chr7	-	2678	15	novel_not_in_catalog	MCM7	novel	2515	14	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	10573	junction_2	699026.262718526	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	106	1962	15.0	-21	True	AATAAA	-18
PB.10717.11	chr7	-	2679	13	novel_in_catalog	MCM7	novel	2515	14	NA	NA	7	0	intron_retention	FALSE	canonical	1	1040509	junction_12	465725.4449258809	NA	1	1	TRUE	NA	NA	NA	C	coding	543	1632	897	2528	15.0	-24	True	AATAAA	-18
PB.6132.1	chr19	+	4317	26	novel_in_catalog	PPFIA3	novel	4733	30	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	39780	junction_19	29797.70773347507	NA	0	NA	TRUE	NA	NA	NA	A	coding	1053	3162	357	3518	30.0	-2	True	NA	NA
PB.10717.13	chr7	-	2490	15	novel_not_in_catalog	MCM7	novel	2515	14	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	3033	junction_14	669154.0335338627	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	504	2339	15.0	-17	True	AATAAA	-18
PB.3679.1	chr14	+	3100	1	intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	2	True	NA	NA
PB.5119.1	chr17	+	756	5	full-splice_match	NME2	ENST00000512737.5	826	5	66	4	66	0	multi-exon	FALSE	canonical	1	1942757	junction_4	2269790.1255592303	NA	0	NA	TRUE	NA	NA	NA	A	coding	152	459	159	617	15.0	-110	False	AATAAA	-16
PB.5480.4	chr18	-	2290	15	full-splice_match	CXXC1	ENST00000285106.10	2936	15	640	6	-13	0	multi-exon	FALSE	canonical	1	350159	junction_11	122068.04119357669	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	76	2046	30.0	27	True	AATAAA	-15
PB.5480.5	chr18	-	2418	14	novel_in_catalog	CXXC1	novel	2280	15	NA	NA	2	0	intron_retention	FALSE	canonical	1	387214	junction_10	111764.54704183906	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	633	2174	30.0	-8	True	AATAAA	-15
PB.5480.6	chr18	-	2241	15	full-splice_match	CXXC1	ENST00000589940.5	2242	15	-1	2	-1	0	multi-exon	FALSE	canonical	1	9767	junction_3	186634.17987619856	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	64	1905	30.0	170	False	AATAAA	-15
PB.5480.1	chr18	-	2893	12	novel_in_catalog	CXXC1	novel	2280	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	29669	junction_7	186014.04631962164	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	1584	2648	25.0	4	True	AATAAA	-16
PB.5480.2	chr18	-	3024	11	novel_in_catalog	CXXC1	novel	2280	15	NA	NA	-7	0	intron_retention	FALSE	canonical	1	460531	junction_10	96754.6804395529	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	1588	2211	30.0	0	True	AATAAA	-15
PB.5480.3	chr18	-	2604	13	novel_in_catalog	CXXC1	novel	2280	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	350159	junction_9	130424.39807349442	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	97	1638	30.0	6	True	AATAAA	-15
PB.10518.13	chr7	-	2610	9	novel_in_catalog	POLM	novel	2444	10	NA	NA	0	2	intron_retention	FALSE	canonical	1	10283	junction_4	44458.387964899266	NA	3	NA	TRUE	NA	NA	NA	C	coding	207	624	160	783	25.0	27	True	AAAACA	-3
PB.10518.12	chr7	-	2552	10	novel_not_in_catalog	POLM	novel	2444	10	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	3756	junction_6	62069.23775157648	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	1027	1743	25.0	-1	True	AAAACA	-4
PB.10518.11	chr7	-	2453	11	novel_not_in_catalog	POLM	novel	2444	10	NA	NA	5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	56989.18755035906	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	172	1032	20.0	15	True	AAAACA	-6
PB.10518.10	chr7	-	2505	10	novel_not_in_catalog	POLM	novel	2444	10	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	1103	junction_4	56618.165928752955	NA	2	NA	TRUE	NA	NA	NA	C	coding	207	624	202	825	20.0	-15	True	AAAACA	-6
PB.10518.15	chr7	-	3808	5	full-splice_match	POLM	ENST00000492312.5	1149	5	-46	-2613	0	-19	multi-exon	FALSE	canonical	1	115058	junction_4	9698.842418041444	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	207	905	95.0	-20	True	NA	NA
PB.6171.3	chr19	-	3202	5	full-splice_match	ZNF649	ENST00000354957.7	3197	5	-6	1	0	-1	multi-exon	FALSE	canonical	1	123884	junction_3	18286.838605606492	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	292	1809	25.0	-1	True	NA	NA
PB.9579.20	chr5	+	2270	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	10	523	1	-522	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	134	1534	85.0	-1	True	NA	NA
PB.9579.21	chr5	+	2238	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	44	7958	0	-522	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	102	1502	85.0	0	True	NA	NA
PB.7369.7	chr20	+	2046	6	novel_in_catalog	CSTF1	novel	585	2	NA	NA	-21	-203	combination_of_known_junctions	FALSE	canonical	1	23661	junction_1	191545.48882247266	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	219	1514	25.0	-24	True	AATAAA	-19
PB.9579.23	chr5	+	4435	11	novel_in_catalog	G3BP1	novel	535	4	NA	NA	0	-7	intron_retention	FALSE	canonical	1	555803	junction_6	269110.3842240392	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	2294	3184	50.0	0	True	ATTAAA	-11
PB.9579.24	chr5	+	5341	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	12	-2550	1	2550	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	132	1532	10.0	1	True	TATAAA	-18
PB.10751.1	chr7	-	2066	3	full-splice_match	ALKBH4	ENST00000292566.3	2105	3	12	27	-1	-27	multi-exon	FALSE	canonical	1	78374	junction_2	26319.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	29	937	75.0	-6	True	NA	NA
PB.10751.2	chr7	-	1801	3	novel_not_in_catalog	ALKBH4	novel	2105	3	NA	NA	-1	-282	any annotated donor/acceptor	FALSE	canonical	1	15044	junction_1	31665.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	433	927	25.0	0	True	ATTAAA	-27
PB.10751.3	chr7	-	1561	3	full-splice_match	ALKBH4	ENST00000292566.3	2105	3	-35	579	-35	17	multi-exon	FALSE	canonical	1	78374	junction_2	26319.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	76	984	25.0	-53	False	TTTAAA	-3
PB.6219.1	chr19	+	1735	4	full-splice_match	RPL28	ENST00000560881.5	1692	4	-11	-32	0	2	multi-exon	FALSE	canonical	1	7132485	junction_3	8018922.8743424555	NA	1	NA	TRUE	NA	NA	NA	A	coding	87	264	43	306	5.0	0	True	AATAAA	-20
PB.9471.18	chr5	-	2306	18	novel_not_in_catalog	BRD8	novel	4388	27	NA	NA	0	-79	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	150285.4445176068	NA	3	1	TRUE	NA	NA	NA	C	coding	396	1188	1119	2306	65.0	-1	True	NA	NA
PB.12236.2	chrX	-	2299	7	full-splice_match	CXorf56	ENST00000644802.1	1056	7	-8	-1235	-1	-2	multi-exon	FALSE	canonical	1	25497	junction_3	45277.243384201545	NA	5	NA	TRUE	NA	NA	NA	C	coding	222	669	55	723	15.0	-26	True	ATTAAA	-15
PB.9532.3	chr5	+	2142	12	full-splice_match	DELE1	ENST00000432126.6	4970	12	32	2796	-15	303	multi-exon	FALSE	canonical	1	247536	junction_10	96567.88585504188	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	103	1650	25.0	-3	True	NA	NA
PB.1799.3	chr11	+	3361	24	novel_in_catalog	PPFIBP2	novel	484	3	NA	NA	179	-2	intron_retention	FALSE	canonical	1	7690	junction_21	68918.2670014008	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	210	2360	30.0	8	True	AATAAA	-22
PB.12236.1	chrX	-	1256	8	novel_not_in_catalog	CXorf56	novel	2372	7	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	52871.307468113126	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	26	694	15.0	3	True	ATTAAA	-16
PB.9471.12	chr5	-	2785	20	novel_in_catalog	BRD8	novel	4388	27	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	63260	junction_12	156987.61911298783	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	48	2474	55.0	-3	True	AATAAA	-4
PB.9471.13	chr5	-	2739	19	novel_in_catalog	BRD8	novel	4388	27	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	63260	junction_11	163524.60334966928	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	47	2428	55.0	-2	True	AATAAA	-4
PB.4170.1	chr16	+	1747	8	full-splice_match	RAB26	ENST00000562735.5	1720	8	2	-29	2	0	multi-exon	TRUE	canonical	1	74521	junction_1	32594.671373695175	NA	1	NA	TRUE	NA	NA	NA	A	coding	214	645	159	803	10.0	-12	True	AATAAA	-15
PB.1172.2	chr1	-	1845	11	incomplete-splice_match	CDC42BPA	ENST00000334218.9	10134	37	149	139295	149	-17176	3prime_fragment	FALSE	canonical	1	160799	junction_9	41851.47530028063	NA	0	NA	TRUE	NA	NA	NA	B	coding	487	1461	384	1844	75.0	1736	False	NA	NA
PB.9471.16	chr5	-	3123	21	novel_in_catalog	BRD8	novel	4388	27	NA	NA	-10	-9	no_combination_of_known_junctions	FALSE	canonical	1	8351	junction_4	157354.68033422934	NA	1	NA	TRUE	NA	NA	NA	C	coding	928	2787	35	2821	75.0	10	True	TTTAAA	-34
PB.9471.17	chr5	-	2552	19	incomplete-splice_match	BRD8	ENST00000230901.9	3198	22	-46	4165	2	-79	3prime_fragment	FALSE	canonical	1	179119	junction_9	122056.9833017314	NA	1	NA	TRUE	NA	NA	NA	C	coding	830	2490	63	2552	65.0	278	False	NA	NA
PB.9471.14	chr5	-	3064	22	novel_not_in_catalog	BRD8	novel	4388	27	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	1825	junction_3	189808.40686819245	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	17	1948	55.0	-1	True	AATAAA	-3
PB.3665.7	chr14	-	2543	10	novel_in_catalog	WARS	novel	2938	11	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	2595	junction_4	839101.4532910844	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	142	975	5.0	-17	True	AATAAA	-18
PB.3665.6	chr14	-	2719	12	novel_in_catalog	WARS	novel	2938	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	1395	junction_11	839866.9424340603	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	217	1632	5.0	-7	True	AATAAA	-18
PB.3665.5	chr14	-	2459	10	full-splice_match	WARS	ENST00000358655.8	2466	10	21	-14	-3	0	multi-exon	FALSE	canonical	1	91545	junction_9	701789.6795248243	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	80	1372	5.0	-4	True	AATAAA	-18
PB.3665.3	chr14	-	2755	11	full-splice_match	WARS	ENST00000355338.6	3092	11	365	-28	-97	-2	multi-exon	FALSE	canonical	1	439719	junction_10	591162.4981120588	NA	2	NA	TRUE	NA	NA	NA	C	coding	471	1416	255	1670	5.0	-130	False	AATAAA	-16
PB.3665.2	chr14	-	3342	10	novel_in_catalog	WARS	novel	2938	11	NA	NA	0	-2	intron_retention	FALSE	canonical	1	706359	junction_9	559386.8824105439	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	1424	2257	5.0	1	True	AATAAA	-16
PB.7498.1	chr21	+	1732	8	full-splice_match	IFNGR2	ENST00000381995.5	1742	8	8	2	-1	-2	multi-exon	FALSE	canonical	1	6996	junction_1	458075.2502360016	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	105	1175	20.0	10	True	AATAAA	-30
PB.586.15	chr1	-	2045	12	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	-15	-94638	any annotated donor/acceptor	FALSE	canonical	1	13693	junction_11	98301.6390702659	NA	0	NA	TRUE	NA	NA	NA	B	coding	551	1656	141	1796	30.0	-47	True	ATTAAA	-19
PB.586.14	chr1	-	2200	13	novel_in_catalog	AL449266.1	novel	557	6	NA	NA	1	-94638	no_combination_of_known_junctions	FALSE	canonical	1	54929	junction_12	100417.68622480333	NA	0	NA	TRUE	NA	NA	NA	B	coding	551	1656	296	1951	30.0	-31	True	ATTAAA	-19
PB.586.17	chr1	-	2005	12	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	-2	-94639	any annotated donor/acceptor	FALSE	canonical	1	2215	junction_11	100850.12061142437	NA	1	1	TRUE	NA	NA	NA	B	coding	551	1656	102	1757	30.0	-34	True	ATTAAA	-18
PB.586.16	chr1	-	2039	12	full-splice_match	CLCC1	ENST00000356970.6	4803	12	-26	2790	-26	-312	multi-exon	FALSE	canonical	1	65789	junction_11	87369.01373480036	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	135	1790	30.0	-31	True	ATTAAA	-19
PB.586.11	chr1	-	2583	12	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	-17	-94135	any annotated donor/acceptor	FALSE	canonical	1	5454	junction_11	119864.41117548729	NA	2	NA	TRUE	NA	NA	NA	B	coding	551	1656	171	1826	15.0	-49	True	AATACA	-18
PB.586.10	chr1	-	2583	12	full-splice_match	CLCC1	ENST00000356970.6	4803	12	-44	2264	-44	214	multi-exon	FALSE	canonical	1	65789	junction_11	87369.01373480036	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	153	1808	30.0	-49	True	AATACA	-41
PB.3665.9	chr14	-	2759	12	novel_in_catalog	WARS	novel	2938	11	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	20750	junction_11	730995.6424724448	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	258	1673	5.0	-9	True	AATAAA	-17
PB.586.12	chr1	-	2502	12	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	10	-94135	any annotated donor/acceptor	FALSE	canonical	1	2215	junction_11	120421.95611142712	NA	6	1	TRUE	NA	NA	NA	B	coding	551	1656	90	1745	15.0	-22	True	AATACA	-18
PB.11278.8	chr8	-	782	4	full-splice_match	ZNF706	ENST00000311212.8	2615	4	-51	1884	15	1	multi-exon	FALSE	canonical	1	103246	junction_3	63678.60431887621	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	236	466	35.0	5	True	AATAAA	-22
PB.3665.16	chr14	-	2551	11	novel_not_in_catalog	WARS	novel	2938	11	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	1634	junction_9	766513.609277774	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	477	1466	5.0	-7	True	AATAAA	-16
PB.3665.15	chr14	-	2743	12	novel_not_in_catalog	WARS	novel	2938	11	NA	NA	3	-2	any annotated donor/acceptor	FALSE	canonical	1	395	junction_5	906984.8693012132	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	969	1658	5.0	-17	True	AATAAA	-16
PB.3665.14	chr14	-	2926	12	novel_in_catalog	WARS	novel	2938	11	NA	NA	15	-2	intron_retention	FALSE	canonical	1	4640	junction_9	879611.6967340036	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	324	1841	5.0	778	False	AATAAA	-16
PB.5272.7	chr17	+	1859	4	incomplete-splice_match	SNHG16	ENST00000590435.5	1947	5	-21	599	1	-599	intron_retention	FALSE	canonical	1	423	junction_2	105454.66730411803	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	2	True	NA	NA
PB.3665.11	chr14	-	2509	10	novel_in_catalog	WARS	novel	2938	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	3332	junction_9	726235.1565350111	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	131	1423	5.0	-1	True	AATAAA	-17
PB.3665.10	chr14	-	2712	11	novel_in_catalog	WARS	novel	2938	11	NA	NA	-3	-1	no_combination_of_known_junctions	FALSE	canonical	1	23553	junction_10	693305.1715105044	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	211	1626	5.0	663	False	AATAAA	-17
PB.333.2	chr1	+	2927	18	full-splice_match	CTPS1	ENST00000498694.2	2855	18	-58	-14	-5	-3	multi-exon	FALSE	canonical	1	320551	junction_1	148701.45205190842	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	161	1654	20.0	-13	True	NA	NA
PB.862.3	chr1	+	2154	9	full-splice_match	LY9	ENST00000392203.8	2213	9	62	-3	-13	-3	multi-exon	TRUE	canonical	1	16698	junction_4	12133.141518558787	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	15	1712	30.0	-6	True	NA	NA
PB.3665.19	chr14	-	2850	12	novel_in_catalog	WARS	novel	2938	11	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	3940	junction_11	839420.3568757067	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	351	1766	5.0	0	True	AATAAA	-15
PB.1955.5	chr11	+	3294	4	full-splice_match	FAM111B	ENST00000343597.3	3488	4	0	194	0	-194	multi-exon	FALSE	canonical	1	129197	junction_2	7849.333573976555	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	192	2396	70.0	0	True	NA	NA
PB.1955.4	chr11	+	2710	4	full-splice_match	FAM111B	ENST00000343597.3	3488	4	-63	841	-11	117	multi-exon	FALSE	canonical	1	129197	junction_2	7849.333573976555	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	255	2459	65.0	-63	False	NA	NA
PB.1955.3	chr11	+	3569	4	full-splice_match	FAM111B	ENST00000343597.3	3488	4	-64	-17	-12	1	multi-exon	FALSE	canonical	1	129197	junction_2	7849.333573976555	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	256	2460	35.0	-64	False	NA	NA
PB.1955.2	chr11	+	3217	3	full-splice_match	FAM111B	ENST00000529618.5	2364	3	-89	-764	-38	-194	multi-exon	FALSE	canonical	1	16676	junction_2	59509.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	205	2319	70.0	-90	False	NA	NA
PB.1955.1	chr11	+	2847	4	full-splice_match	FAM111B	ENST00000343597.3	3488	4	-67	708	-15	250	multi-exon	FALSE	canonical	1	129197	junction_2	7849.333573976555	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	259	2463	55.0	-67	False	NA	NA
PB.7078.3	chr2	+	5147	15	novel_in_catalog	ATG16L1	novel	589	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	167928	junction_1	43839.77167801644	NA	6	NA	TRUE	NA	NA	NA	C	coding	265	798	163	960	15.0	-7	True	AATAAA	-28
PB.8443.14	chr3	-	2432	20	incomplete-splice_match	XRN1	ENST00000392981.6	5383	41	-45	86068	-9	15219	3prime_fragment	FALSE	canonical	1	119857	junction_13	48029.208219922664	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2337	94	2430	35.0	-1	True	GATAAA	-45
PB.8443.15	chr3	-	2831	1	novel_in_catalog	XRN1	novel	10143	42	NA	NA	-9	-10194	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.8443.12	chr3	-	2932	25	incomplete-splice_match	XRN1	ENST00000392981.6	5383	41	-7	64638	-7	350	3prime_fragment	FALSE	canonical	1	111624	junction_4	49157.58702539947	NA	0	NA	TRUE	NA	NA	NA	C	coding	959	2877	56	2932	55.0	69	False	CATAAA	-28
PB.5105.1	chr17	-	2891	26	incomplete-splice_match	COL1A1	ENST00000225964.9	6727	51	8547	1988	-646	567	5prime_fragment	FALSE	canonical	1	4349532	junction_8	1849497.2153516344	NA	2	NA	TRUE	NA	NA	NA	A	coding	276	831	763	1593	95.0	-2	True	NA	NA
PB.8443.10	chr3	-	4898	34	novel_not_in_catalog	XRN1	novel	10143	42	NA	NA	-3	11325	any annotated donor/acceptor	FALSE	canonical	1	274	junction_1	52937.035368285455	NA	6	NA	TRUE	NA	NA	NA	C	coding	1292	3879	72	3950	15.0	1	True	NA	NA
PB.8443.11	chr3	-	3297	27	incomplete-splice_match	XRN1	ENST00000392981.6	5383	41	-45	59224	-9	0	3prime_fragment	FALSE	canonical	1	111624	junction_6	48321.22426837278	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3204	94	3297	35.0	-1	True	NA	NA
PB.11520.5	chr9	-	2675	10	full-splice_match	FAM214B	ENST00000378566.5	2566	10	-120	11	-74	0	multi-exon	FALSE	canonical	1	8267	junction_7	64120.77519132003	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	876	1577	25.0	-60	False	AATAAA	-19
PB.11520.4	chr9	-	2472	10	novel_in_catalog	FAM214B	novel	2566	10	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	8267	junction_7	74348.51336031467	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	670	1371	15.0	12	False	AATAAA	-22
PB.703.2	chr1	+	3627	1	novel_in_catalog	AC245297.3	novel	838	3	NA	NA	797	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	941	False	TTTAAA	-28
PB.703.3	chr1	+	3967	1	novel_in_catalog	AC245297.3	novel	838	3	NA	NA	171	-291	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	B	coding	227	684	2	685	15.0	315	False	AATAAA	-14
PB.703.1	chr1	+	3661	2	incomplete-splice_match	AC245297.3	ENST00000612135.1	405	4	-144	10662	-2	-5	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	0	True	TTTAAA	-28
PB.7034.8	chr2	-	2223	7	incomplete-splice_match	PAX3	ENST00000350526.9	1788	8	-246	17760	-2	-5086	3prime_fragment	FALSE	canonical	1	13453	junction_5	8549.500836631081	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	384	1628	30.0	-3	True	AATAAA	-17
PB.7078.2	chr2	+	3608	17	full-splice_match	ATG16L1	ENST00000479942.5	3559	17	-41	-8	-29	0	multi-exon	FALSE	canonical	1	83090	junction_8	62408.38217861719	NA	2	NA	TRUE	NA	NA	NA	C	coding	470	1413	188	1600	10.0	-94	False	AATAAA	-30
PB.7034.3	chr2	-	3564	8	full-splice_match	PAX3	ENST00000350526.9	1788	8	49	-1825	43	0	multi-exon	FALSE	canonical	1	13453	junction_6	7918.90364757596	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	89	1528	10.0	527	False	AATAAA	-16
PB.7034.2	chr2	-	3139	9	full-splice_match	PAX3	ENST00000392070.6	2258	9	216	-1097	-28	-1	multi-exon	FALSE	canonical	1	13453	junction_7	7556.074278353806	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	166	1620	10.0	450	False	AATAAA	-15
PB.7034.7	chr2	-	1941	9	full-splice_match	PAX3	ENST00000409551.7	1782	9	-135	-24	-34	-2	multi-exon	FALSE	canonical	1	9640	junction_7	8253.496432383974	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	416	1867	70.0	200	False	NA	NA
PB.7034.6	chr2	-	2413	8	full-splice_match	PAX3	ENST00000350526.9	1788	8	-246	-379	-2	-2	multi-exon	FALSE	canonical	1	13453	junction_6	7918.90364757596	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	384	1823	70.0	-3	True	NA	NA
PB.7034.5	chr2	-	2096	9	full-splice_match	PAX3	ENST00000392070.6	2258	9	-2	164	-2	3	multi-exon	FALSE	canonical	1	13453	junction_7	7556.074278353806	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	384	1838	30.0	-3	True	AATAAA	-24
PB.7034.4	chr2	-	3187	10	full-splice_match	PAX3	ENST00000392069.6	3170	10	-17	0	-2	0	multi-exon	FALSE	canonical	1	2330	junction_1	9715.721197886533	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	384	1901	10.0	-3	True	AATAAA	-16
PB.11520.3	chr9	-	2978	9	full-splice_match	FAM214B	ENST00000322813.9	3028	9	2	48	2	-27	multi-exon	FALSE	canonical	1	21237	junction_8	64051.054767734895	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	310	1926	80.0	16	False	AAAACA	-32
PB.7747.1	chr22	+	1417	10	full-splice_match	NCF4	ENST00000248899.10	1396	10	-22	1	-22	-1	multi-exon	FALSE	canonical	1	287551	junction_5	56739.108385619365	NA	0	NA	TRUE	NA	NA	NA	A	coding	339	1020	207	1226	25.0	0	True	AATAAA	-19
PB.7058.2	chr2	+	3794	9	full-splice_match	CAB39	ENST00000258418.9	3826	9	30	2	30	-2	multi-exon	FALSE	canonical	1	281212	junction_1	211732.28987376372	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	400	1425	15.0	33	True	AATAAA	-16
PB.7498.2	chr21	+	1654	7	full-splice_match	IFNGR2	ENST00000290219.10	2221	7	550	17	5	2	multi-exon	FALSE	canonical	1	292161	junction_1	291774.0009400826	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	99	1112	25.0	16	True	AATAAA	-15
PB.7078.1	chr2	+	3562	16	novel_in_catalog	ATG16L1	novel	589	6	NA	NA	-43	-2	intron_retention	TRUE	canonical	1	66487	junction_7	58022.76071964251	NA	2	1	TRUE	NA	NA	NA	C	coding	451	1356	202	1557	15.0	-108	False	AATAAA	-27
PB.530.14	chr1	+	3014	2	full-splice_match	LRRC8D	ENST00000527156.1	922	2	283	-2375	283	2	multi-exon	FALSE	canonical	1	193635	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	80	2656	15.0	49	False	ATTAAA	-22
PB.1949.1	chr11	+	3729	12	full-splice_match	ZDHHC5	ENST00000287169.7	4666	12	116	821	-93	3	multi-exon	FALSE	canonical	1	307468	junction_1	138517.6640454027	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	1247	3394	10.0	-106	True	TTTAAA	-32
PB.1949.2	chr11	+	3567	12	novel_not_in_catalog	ZDHHC5	novel	2817	11	NA	NA	-55	-4	any annotated donor/acceptor	FALSE	canonical	1	1631	junction_5	215449.28404124323	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	1209	3239	15.0	-68	True	TTTAAA	-25
PB.1949.3	chr11	+	3761	11	novel_in_catalog	ZDHHC5	novel	2817	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	307468	junction_1	141035.50253113575	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	1840	3429	10.0	-10	True	TTTAAA	-29
PB.530.10	chr1	+	3187	3	novel_not_in_catalog	AC093423.3	novel	654	4	NA	NA	210110	2750	any annotated donor/acceptor	FALSE	canonical	1	259	junction_1	96688.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	858	2577	256	2832	15.0	-407	False	ATTAAA	-19
PB.530.11	chr1	+	3364	3	incomplete-splice_match	LRRC8D	ENST00000525774.5	588	4	22410	-2840	1	-1	5prime_fragment	FALSE	canonical	1	7345	junction_1	3336.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2577	433	3009	15.0	-27	True	ATTAAA	-19
PB.530.12	chr1	+	3717	2	full-splice_match	LRRC8D	ENST00000527156.1	922	2	2	-2797	2	-186	multi-exon	FALSE	canonical	1	193635	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	361	2937	65.0	-26	True	AATAAA	-34
PB.530.13	chr1	+	3433	3	novel_not_in_catalog	AC093423.3	novel	654	4	NA	NA	210289	2753	any annotated donor/acceptor	FALSE	canonical	1	4743	junction_1	688.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	858	2577	499	3075	15.0	-22	True	ATTAAA	-22
PB.2879.20	chr12	-	3431	11	full-splice_match	CORO1C	ENST00000261401.7	3892	11	50	411	-20	-405	multi-exon	FALSE	canonical	1	863290	junction_10	127763.90585983195	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	124	1548	20.0	381	False	AAGAAA	-26
PB.2879.21	chr12	-	2319	11	full-splice_match	CORO1C	ENST00000261401.7	3892	11	78	1495	0	-35	multi-exon	FALSE	canonical	1	863290	junction_10	127763.90585983195	NA	5	NA	TRUE	NA	NA	NA	C	coding	474	1425	96	1520	20.0	-1	True	NA	NA
PB.2879.22	chr12	-	2060	11	full-splice_match	CORO1C	ENST00000261401.7	3892	11	78	1754	0	126	multi-exon	FALSE	canonical	1	863290	junction_10	127763.90585983195	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	96	1520	45.0	-1	True	TATAAA	-13
PB.2879.23	chr12	-	1761	11	full-splice_match	CORO1C	ENST00000261401.7	3892	11	78	2053	0	-173	multi-exon	FALSE	canonical	1	863290	junction_10	127763.90585983195	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	96	1520	20.0	-1	True	TTTAAA	-37
PB.2879.24	chr12	-	3181	7	novel_in_catalog	CORO1C	novel	3892	11	NA	NA	2	-28	intron_retention	FALSE	canonical	1	863290	junction_6	139965.68174218835	NA	4	NA	TRUE	NA	NA	NA	C	coding	294	885	94	978	90.0	1	True	ACTAAA	-29
PB.11687.4	chr9	+	6952	17	full-splice_match	INVS	ENST00000262457.6	3709	17	-11	-3232	-11	3232	multi-exon	FALSE	canonical	1	50524	junction_1	25738.692574285775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	197	3394	65.0	2	True	NA	NA
PB.7782.2	chr22	+	4791	11	novel_in_catalog	GTPBP1	novel	5126	12	NA	NA	-5	-2	combination_of_known_junctions	TRUE	canonical	1	32151	junction_1	142805.20107422557	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	237	1910	25.0	0	True	AATAAA	-22
PB.8435.41	chr3	+	6559	3	full-splice_match	ZBTB38	ENST00000513570.1	649	3	194	-6104	194	514	multi-exon	FALSE	canonical	1	25940	junction_1	87703.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	247	3834	30.0	-2	True	ATTAAA	-16
PB.8435.42	chr3	+	6015	2	full-splice_match	ZBTB38	ENST00000509813.1	855	2	320	-5480	320	15	multi-exon	FALSE	canonical	1	5125	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	211	3789	25.0	-45	True	TATAAA	-42
PB.8435.43	chr3	+	3893	2	full-splice_match	ZBTB38	ENST00000509813.1	855	2	323	-3361	323	83	multi-exon	FALSE	canonical	1	5125	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	208	3786	75.0	-42	True	NA	NA
PB.8435.44	chr3	+	2844	2	full-splice_match	ZBTB38	ENST00000509813.1	855	2	449	-2438	449	459	multi-exon	FALSE	canonical	1	5125	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2763	82	2844	55.0	-13	True	NA	NA
PB.8435.45	chr3	+	6707	2	full-splice_match	ZBTB38	ENST00000509813.1	855	2	333	-6185	333	720	multi-exon	FALSE	canonical	1	5125	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	198	3776	25.0	-32	True	AATAAA	-19
PB.8435.46	chr3	+	2966	3	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	450	459	no_combination_of_known_junctions	FALSE	canonical	1	217	junction_1	32848.5	NA	6	1	TRUE	NA	NA	NA	C	coding	921	2763	204	2966	55.0	-12	True	NA	NA
PB.8435.47	chr3	+	6470	3	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	462	514	intron_retention	FALSE	canonical	1	750	junction_1	32582.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	167	3745	30.0	0	True	ATTAAA	-16
PB.3230.5	chr13	+	4567	26	full-splice_match	IPO5	ENST00000490680.5	3419	26	45	-1193	2	572	multi-exon	FALSE	canonical	1	956269	junction_1	368679.0354614702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	21	3314	35.0	-1	True	ATTAAA	-13
PB.3230.4	chr13	+	5847	26	full-splice_match	IPO5	ENST00000490680.5	3419	26	-15	-2413	-15	-2	multi-exon	FALSE	canonical	1	956269	junction_1	368679.0354614702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	81	3374	40.0	-61	False	AATAAA	-13
PB.3230.7	chr13	+	3995	26	full-splice_match	IPO5	ENST00000490680.5	3419	26	45	-621	2	0	multi-exon	FALSE	canonical	1	956269	junction_1	368679.0354614702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	21	3314	15.0	-1	True	AATAAA	-37
PB.3230.6	chr13	+	4880	26	full-splice_match	IPO5	ENST00000490680.5	3419	26	-84	-1377	83	756	multi-exon	FALSE	canonical	1	956269	junction_1	368679.0354614702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	150	3443	15.0	-130	False	ATTAAA	-16
PB.3230.1	chr13	+	4744	27	incomplete-splice_match	IPO5	ENST00000357602.7	4335	29	15556	-586	174	572	5prime_fragment	FALSE	canonical	1	21102	junction_1	462733.772686443	NA	1	NA	TRUE	NA	NA	NA	C	coding	1097	3294	198	3491	35.0	-873	False	ATTAAA	-13
PB.3230.3	chr13	+	3376	26	full-splice_match	IPO5	ENST00000490680.5	3419	26	42	1	-1	-1	multi-exon	FALSE	canonical	1	956269	junction_1	368679.0354614702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	24	3317	5.0	-4	True	AATAAA	-18
PB.3230.2	chr13	+	4120	27	incomplete-splice_match	IPO5	ENST00000357602.7	4335	29	15608	-14	226	0	5prime_fragment	FALSE	canonical	1	21102	junction_1	462733.772686443	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	146	3439	15.0	-821	False	AATAAA	-37
PB.4278.12	chr16	-	4075	32	novel_in_catalog	NOMO2	novel	4352	31	NA	NA	-1	-226	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	171479.22600367657	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	74	2041	40.0	NA	False	AATATA	-20
PB.4278.13	chr16	+	3737	31	full-splice_match	NOMO3	ENST00000399336.8	4356	31	77	542	-29	-5	multi-exon	FALSE	canonical	1	3941	junction_5	93250.09338121628	NA	5	NA	TRUE	NA	NA	NA	C	coding	1214	3642	96	3737	55.0	44	False	NA	NA
PB.3230.9	chr13	+	4425	24	novel_in_catalog	IPO5	novel	544	5	NA	NA	-8	572	no_combination_of_known_junctions	FALSE	canonical	1	2763	junction_8	489719.58386942605	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	74	3172	35.0	-54	False	ATTAAA	-13
PB.3230.8	chr13	+	4980	26	full-splice_match	IPO5	ENST00000490680.5	3419	26	-66	-1495	-66	874	multi-exon	FALSE	canonical	1	956269	junction_1	368679.0354614702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1097	3294	132	3425	25.0	1	True	AGTAAA	-10
PB.5701.6	chr19	-	2234	16	novel_not_in_catalog	TYK2	novel	3971	23	NA	NA	-198	0	any annotated donor/acceptor	FALSE	canonical	1	4203	junction_13	184566.85874831976	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	139	1929	15.0	2506	False	AATAAA	-20
PB.7686.1	chr22	-	4143	21	full-splice_match	AP1B1	ENST00000432560.6	4146	21	3	0	3	0	multi-exon	FALSE	canonical	1	45319	junction_19	252621.12970123359	NA	3	NA	TRUE	NA	NA	NA	C	coding	939	2820	185	3004	20.0	-16	True	AATAAA	-13
PB.7686.6	chr22	-	3959	21	novel_not_in_catalog	AP1B1	novel	3560	4	NA	NA	18	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	297936.1455514252	NA	3	1	TRUE	NA	NA	NA	C	coding	985	2958	170	3127	25.0	-1	True	AATAAA	-20
PB.7686.7	chr22	-	3952	21	full-splice_match	AP1B1	ENST00000432560.6	4146	21	18	176	18	7	multi-exon	FALSE	canonical	1	45319	junction_19	252621.12970123359	NA	2	1	TRUE	NA	NA	NA	C	coding	939	2820	170	2989	25.0	-1	True	AATAAA	-20
PB.3220.8	chr13	+	8687	8	novel_in_catalog	GPR180	novel	8822	9	NA	NA	-36	10	no_combination_of_known_junctions	FALSE	canonical	1	24971	junction_3	55646.3542752124	NA	14	1	TRUE	NA	NA	NA	C	coding	174	525	62	586	35.0	10	True	NA	NA
PB.3220.9	chr13	+	7308	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-34	1548	-34	-1548	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	60	1382	15.0	12	True	NA	NA
PB.3220.6	chr13	+	3045	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-23	5800	-23	-5800	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	49	1371	75.0	23	True	NA	NA
PB.3220.7	chr13	+	2896	8	novel_in_catalog	GPR180	novel	8822	9	NA	NA	-42	-5787	no_combination_of_known_junctions	FALSE	canonical	1	24971	junction_3	55646.3542752124	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	68	592	70.0	4	True	AAAAAG	-7
PB.3220.4	chr13	+	3371	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-54	5505	-54	-5505	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	80	1402	50.0	-8	True	AATAAA	-25
PB.3220.5	chr13	+	3774	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-44	5092	-44	-5092	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	70	1392	30.0	2	True	NA	NA
PB.3220.2	chr13	+	3359	8	novel_not_in_catalog	GPR180	novel	8822	9	NA	NA	-104	-5361	any annotated donor/acceptor	FALSE	canonical	1	4864	junction_1	72137.92899065805	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	734	1246	20.0	-1	True	ATTAAA	-19
PB.3220.3	chr13	+	3667	8	novel_in_catalog	GPR180	novel	8822	9	NA	NA	11	-4963	no_combination_of_known_junctions	FALSE	canonical	1	24971	junction_3	55646.3542752124	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	15	539	40.0	57	True	ATTAAA	-15
PB.3220.1	chr13	+	3541	9	novel_not_in_catalog	GPR180	novel	8822	9	NA	NA	-104	-5360	any annotated donor/acceptor	FALSE	canonical	1	4864	junction_1	56425.042384648455	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	408	1427	20.0	-1	True	ATTAAA	-20
PB.6440.9	chr2	-	3630	20	incomplete-splice_match	THADA	ENST00000405006.8	6310	38	-26	318212	7	3004	3prime_fragment	FALSE	canonical	1	12652	junction_19	34860.13696238171	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	379	3522	35.0	37	True	AATAAA	-25
PB.6440.8	chr2	-	5725	36	novel_in_catalog	THADA	novel	6114	38	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	8632	junction_21	39260.769132266665	NA	2	NA	TRUE	NA	NA	NA	C	coding	1832	5499	131	5629	15.0	1	True	CATAAA	-18
PB.8.2	chr1	+	2529	16	novel_in_catalog	PLEKHN1	novel	2404	16	NA	NA	-17	72	combination_of_known_junctions	FALSE	canonical	1	19764	junction_5	8117.052558656991	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	53	1924	70.0	-24	True	NA	NA
PB.5584.15	chr19	-	2563	2	full-splice_match	MOB3A	ENST00000592143.2	558	2	-8	-1997	-8	0	multi-exon	FALSE	canonical	1	7390	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	1922	2542	25.0	-13	True	AATAAA	-21
PB.5584.14	chr19	-	3020	6	novel_not_in_catalog	MOB3A	novel	3391	5	NA	NA	25	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	240644.32100791408	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	356	1009	25.0	14	True	AATAAA	-21
PB.5584.17	chr19	-	2303	1	incomplete-splice_match	MOB3A	ENST00000357066.7	3391	5	22991	1	5378	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	206	621	1663	2283	25.0	5057	False	AATAAA	-20
PB.5584.11	chr19	-	3239	4	novel_in_catalog	MOB3A	novel	3391	5	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	6713	junction_3	255521.37088096738	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	229	882	25.0	-13	True	AATAAA	-21
PB.5584.10	chr19	-	3299	4	novel_in_catalog	MOB3A	novel	3391	5	NA	NA	861	0	no_combination_of_known_junctions	FALSE	canonical	1	3187	junction_3	257102.08748190972	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	289	942	25.0	1105	False	AATAAA	-21
PB.6440.7	chr2	-	5875	36	novel_in_catalog	THADA	novel	6114	38	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	6408	junction_10	38376.05287761244	NA	1	NA	TRUE	NA	NA	NA	C	coding	1879	5640	140	5779	15.0	-8	True	CATAAA	-18
PB.5584.12	chr19	-	3035	5	novel_not_in_catalog	MOB3A	novel	3391	5	NA	NA	3	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	231765.7843799425	NA	9	1	TRUE	NA	NA	NA	C	coding	217	654	285	938	25.0	-2	True	AATAAA	-21
PB.8874.6	chr4	-	2915	8	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	-5	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	81536.7915746365	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	429	1547	60.0	-22	False	AATAAA	-12
PB.8874.7	chr4	-	2219	7	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	5	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	98539.65264763554	NA	2	NA	TRUE	NA	NA	NA	C	coding	153	462	386	847	45.0	179	False	AATAAA	-16
PB.8874.4	chr4	-	2621	7	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	25	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104221.0333266115	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	372	833	40.0	-3	True	AATAAA	-22
PB.8874.5	chr4	-	2299	7	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	27	4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	104221.0333266115	NA	1	1	TRUE	NA	NA	NA	C	coding	153	462	370	831	40.0	-1	True	AATAAA	-22
PB.8874.2	chr4	-	2812	8	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	5	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	81536.7915746365	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	228	1346	40.0	179	False	AATAAA	-21
PB.8874.3	chr4	-	2642	8	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	3	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	81536.7915746365	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	230	1348	40.0	177	False	AATAAA	-22
PB.8874.1	chr4	-	2453	6	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	26	12	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	93802.08125111084	NA	1	1	TRUE	NA	NA	NA	C	coding	153	462	516	977	20.0	-2	True	AATAAA	-30
PB.9498.7	chr5	-	2826	10	full-splice_match	APBB3	ENST00000510241.5	2801	10	-25	0	-17	0	multi-exon	FALSE	canonical	1	126664	junction_8	55496.809509896855	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	1719	2510	25.0	-1	True	AATAAA	-18
PB.11110.6	chr8	+	5012	21	novel_in_catalog	IKBKB	novel	3938	22	NA	NA	1	-3	intron_retention	FALSE	canonical	1	82115	junction_1	89005.48892729875	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	186	1928	40.0	-15	True	NA	NA
PB.7860.10	chr22	+	2563	12	full-splice_match	ATXN10	ENST00000252934.9	3329	12	247	519	-18	-516	multi-exon	FALSE	canonical	1	496116	junction_1	348534.7377024596	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	19	1446	65.0	9	True	AATATA	-36
PB.3404.15	chr14	+	3183	15	full-splice_match	PRPF39	ENST00000424478.5	3174	15	-12	3	-2	2	multi-exon	FALSE	canonical	1	48196	junction_3	111606.46716056029	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	852	2498	30.0	-2	True	AATAAA	-18
PB.4792.1	chr17	+	896	5	full-splice_match	LRRC75A-AS1	ENST00000580180.5	753	5	51	-194	-1	1	multi-exon	FALSE	canonical	1	578692	junction_1	4929497.780100797	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-26
PB.8555.5	chr3	-	5902	30	novel_in_catalog	ABCC5	novel	5921	30	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	1	5061	junction_29	52498.704095324734	NA	1	NA	TRUE	NA	NA	NA	C	coding	1437	4314	228	4541	35.0	768	False	AATAAA	-17
PB.8555.6	chr3	-	4829	30	full-splice_match	ABCC5	ENST00000334444.10	5921	30	131	961	5	-956	multi-exon	FALSE	canonical	1	72288	junction_25	45872.92904176048	NA	0	NA	TRUE	NA	NA	NA	C	coding	1437	4314	111	4424	20.0	-1	True	ATTAAA	-38
PB.4792.2	chr17	+	1657	4	full-splice_match	LRRC75A-AS1	ENST00000497774.5	1662	4	26	-21	0	4	multi-exon	FALSE	canonical	1	578692	junction_1	5483635.988573174	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-18
PB.2998.2	chr12	+	1740	7	full-splice_match	KMT5A	ENST00000437519.5	1774	7	-5	39	-5	-39	multi-exon	FALSE	canonical	1	19608	junction_5	73894.51119595346	NA	1	1	TRUE	NA	NA	NA	C	coding	295	888	88	975	75.0	9	True	NA	NA
PB.2998.1	chr12	+	2623	7	full-splice_match	KMT5A	ENST00000437519.5	1774	7	-6	-843	-6	-1	multi-exon	FALSE	canonical	1	19608	junction_5	73894.51119595346	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	89	976	15.0	8	True	ATTAAA	-16
PB.5090.5	chr17	+	5502	15	full-splice_match	IGF2BP1	ENST00000290341.7	8274	15	32	2740	32	-2740	multi-exon	FALSE	canonical	1	146330	junction_2	57505.945352260256	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	303	2036	40.0	-57	True	AAGAAA	-45
PB.5090.4	chr17	+	2327	15	full-splice_match	IGF2BP1	ENST00000290341.7	8274	15	82	5865	8	341	multi-exon	FALSE	canonical	1	146330	junction_2	57505.945352260256	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	253	1986	45.0	-7	True	AATAAA	-17
PB.5090.3	chr17	+	2522	15	full-splice_match	IGF2BP1	ENST00000290341.7	8274	15	26	5726	26	480	multi-exon	FALSE	canonical	1	146330	junction_2	57505.945352260256	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	309	2042	20.0	-63	True	ATTAAA	-37
PB.5090.2	chr17	+	7735	15	full-splice_match	IGF2BP1	ENST00000290341.7	8274	15	18	521	18	-521	multi-exon	FALSE	canonical	1	146330	junction_2	57505.945352260256	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	317	2050	85.0	-936	False	NA	NA
PB.5090.1	chr17	+	3728	15	full-splice_match	IGF2BP1	ENST00000290341.7	8274	15	49	4497	-25	1709	multi-exon	FALSE	canonical	1	146330	junction_2	57505.945352260256	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	286	2019	10.0	-40	True	ATTAAA	-14
PB.9498.6	chr5	-	3554	10	novel_in_catalog	APBB3	novel	2064	8	NA	NA	-17	0	intron_retention	FALSE	canonical	1	30987	junction_6	75781.74335273799	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	2447	3238	25.0	-1	True	AATAAA	-18
PB.6667.4	chr2	+	3854	11	full-splice_match	IL18R1	ENST00000233957.5	3661	11	-193	0	45	0	multi-exon	FALSE	canonical	1	20678	junction_8	9613.568908579164	NA	3	NA	TRUE	NA	NA	NA	C	coding	541	1626	340	1965	20.0	-245	False	CATAAA	-29
PB.6667.5	chr2	+	3722	12	novel_not_in_catalog	IL18R1	novel	1749	11	NA	NA	-18	6	any annotated donor/acceptor	FALSE	canonical	1	7584	junction_4	15173.554605146806	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	687	1844	40.0	-4	True	CATAAA	-18
PB.6667.2	chr2	+	4004	12	full-splice_match	IL18R1	ENST00000409599.5	3854	12	-133	-17	-133	0	multi-exon	FALSE	canonical	1	5422	junction_1	13287.496787432652	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	490	2115	20.0	-9	True	CATAAA	-29
PB.6667.3	chr2	+	3980	10	novel_in_catalog	IL18R1	novel	1749	11	NA	NA	-124	0	intron_retention	FALSE	canonical	1	854	junction_9	14117.598583958172	NA	2	NA	TRUE	NA	NA	NA	C	coding	488	1467	625	2091	20.0	0	True	CATAAA	-29
PB.509.6	chr1	-	4096	1	novel_in_catalog	BCL10	novel	2833	3	NA	NA	-61	-1616	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	80	243	166	408	90.0	27	True	NA	NA
PB.509.7	chr1	-	2209	1	novel_in_catalog	BCL10	novel	2833	3	NA	NA	14	-3604	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	80	243	267	509	75.0	-74	True	NA	NA
PB.509.4	chr1	-	2325	3	full-splice_match	BCL10	ENST00000620248.2	776	3	-174	-1375	2	-473	multi-exon	FALSE	canonical	1	15113	junction_1	114167.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	222	669	279	947	20.0	-86	True	AATAAA	-14
PB.509.5	chr1	-	2438	4	novel_not_in_catalog	BCL10	novel	2833	3	NA	NA	-54	-474	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	138882.3162273249	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	159	1061	20.0	34	True	AATAAA	-13
PB.4500.2	chr16	-	972	8	full-splice_match	PSMB10	ENST00000358514.8	1218	8	239	7	-1	-3	multi-exon	FALSE	canonical	1	845649	junction_4	248379.55761146147	NA	0	NA	TRUE	NA	NA	NA	A	coding	273	822	100	921	30.0	1	True	AATAAA	-17
PB.509.3	chr1	-	2478	3	full-splice_match	BCL10	ENST00000648566.1	2833	3	-124	479	-124	-479	multi-exon	FALSE	canonical	1	243447	junction_2	26357.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	233	702	405	1106	30.0	-212	False	AATAAA	-8
PB.4500.1	chr16	-	1451	7	novel_in_catalog	AC040162.1	novel	5685	6	NA	NA	-839	-3584	intron_retention	FALSE	canonical	1	845649	junction_3	265036.93168777856	NA	0	NA	TRUE	NA	NA	NA	A	coding	223	672	108	779	30.0	-7	True	AATAAA	-17
PB.152.6	chr1	-	3444	27	full-splice_match	USP48	ENST00000308271.13	4595	27	510	641	99	-21	multi-exon	FALSE	canonical	1	336773	junction_16	106413.90336449345	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	140	3247	35.0	-5	True	AATAAA	-30
PB.6497.9	chr2	+	4118	25	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	0	-3	intron_retention	FALSE	canonical	1	3979	junction_13	105225.23069320162	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	321	3134	25.0	-27	True	AATAAA	-21
PB.7078.4	chr2	+	3301	18	full-splice_match	ATG16L1	ENST00000392017.8	3405	18	101	3	0	-2	multi-exon	FALSE	canonical	1	83090	junction_8	60788.193493308645	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	157	1980	15.0	-1	True	AATAAA	-27
PB.8616.29	chr3	-	4515	16	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	666356.3836994402	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	419	1735	20.0	-3	True	AATAAA	-14
PB.6164.1	chr19	+	1419	4	full-splice_match	CLEC11A	ENST00000250340.8	1419	4	-1	1	-1	-1	multi-exon	FALSE	canonical	1	390639	junction_3	168651.8040757347	NA	0	NA	TRUE	NA	NA	NA	A	coding	323	972	199	1170	25.0	0	True	AATAAA	-25
PB.8616.28	chr3	-	4788	18	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	3351	junction_2	447527.8750415101	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	72	2132	20.0	-1	True	AATAAA	-14
PB.9498.5	chr5	-	3690	9	novel_not_in_catalog	APBB3	novel	2064	8	NA	NA	3	0	intron_retention	FALSE	canonical	1	28171	junction_2	81045.11953805423	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	2561	2926	25.0	-19	True	AATAAA	-18
PB.7014.5	chr2	+	4331	20	novel_not_in_catalog	TTLL4	novel	3723	19	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	2825	junction_15	65077.76620585167	NA	5	1	TRUE	NA	NA	NA	C	coding	972	2919	338	3256	20.0	-2	True	TATAAA	-21
PB.7014.4	chr2	+	4962	20	full-splice_match	TTLL4	ENST00000392102.5	4967	20	2	3	2	-3	multi-exon	FALSE	canonical	1	81359	junction_1	51046.246259446496	NA	1	1	TRUE	NA	NA	NA	C	coding	1199	3600	339	3938	35.0	-3	True	AGTAAA	-16
PB.7014.6	chr2	+	2000	13	incomplete-splice_match	TTLL4	ENST00000258398.8	4730	18	8581	730	0	-7	5prime_fragment	FALSE	canonical	1	162149	junction_8	37567.82703398688	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	36	1703	25.0	4	True	TATAAA	-17
PB.7014.1	chr2	+	4039	19	novel_in_catalog	TTLL4	novel	3723	19	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	1	9385	junction_1	57866.70484925776	NA	0	NA	TRUE	NA	NA	NA	C	coding	1199	3600	141	3740	20.0	2	True	TATAAA	-19
PB.7014.3	chr2	+	4160	20	full-splice_match	TTLL4	ENST00000392102.5	4967	20	82	725	1	-2	multi-exon	FALSE	canonical	1	81359	junction_1	51046.246259446496	NA	0	NA	TRUE	NA	NA	NA	C	coding	1199	3600	259	3858	20.0	-37	True	TATAAA	-22
PB.7014.2	chr2	+	5032	19	novel_in_catalog	TTLL4	novel	3723	19	NA	NA	6	-3	intron_retention	FALSE	canonical	1	81359	junction_1	52324.44963077566	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	3172	4731	20.0	-25	True	TATAAA	-21
PB.12163.2	chrX	-	1026	6	full-splice_match	ITM2A	ENST00000373298.6	1641	6	32	583	-9	-5	multi-exon	FALSE	canonical	1	564444	junction_5	131421.92602971545	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	113	904	90.0	3	True	NA	NA
PB.12163.1	chrX	-	1653	6	full-splice_match	ITM2A	ENST00000373298.6	1641	6	-14	2	-14	2	multi-exon	FALSE	canonical	1	564444	junction_5	131421.92602971545	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	159	950	20.0	-43	True	AATAAA	-14
PB.10643.1	chr7	-	6568	19	novel_in_catalog	SEMA3D	novel	6265	17	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	18330	junction_18	8502.893889548051	NA	2	NA	TRUE	NA	NA	NA	B	coding	777	2334	353	2686	30.0	-20	True	AATAAA	-28
PB.8128.3	chr3	+	1731	18	incomplete-splice_match	RBM5	ENST00000347869.7	3188	25	9	5529	-2	0	3prime_fragment	FALSE	canonical	1	263723	junction_6	194260.35143046887	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1563	167	1729	60.0	-37	True	NA	NA
PB.4703.13	chr17	+	5909	18	full-splice_match	RABEP1	ENST00000537505.5	5365	18	-19	-525	16	525	multi-exon	FALSE	canonical	1	259749	junction_1	72525.40854407115	NA	3	NA	TRUE	NA	NA	NA	C	coding	862	2589	207	2795	45.0	-3	True	AATAAA	-27
PB.4703.12	chr17	+	4394	19	novel_in_catalog	RABEP1	novel	551	3	NA	NA	16	-1056	combination_of_known_junctions	FALSE	canonical	1	17642	junction_9	150501.2076190835	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	207	2861	35.0	-3	True	AATAAA	-40
PB.4231.3	chr16	+	1707	10	novel_in_catalog	METTL22	novel	614	4	NA	NA	-1	2	intron_retention	FALSE	canonical	1	5852	junction_9	102805.76607129668	NA	1	NA	TRUE	NA	NA	NA	B	coding	205	618	257	874	25.0	-8	True	AGTAAA	-20
PB.4703.10	chr17	+	5554	19	novel_not_in_catalog	RABEP1	novel	551	3	NA	NA	13	-3	any annotated donor/acceptor	FALSE	canonical	1	1072	junction_1	151414.13027991424	NA	6	1	TRUE	NA	NA	NA	C	coding	778	2337	632	2968	10.0	-6	True	ATTAAA	-17
PB.4703.17	chr17	+	5946	19	novel_not_in_catalog	RABEP1	novel	551	3	NA	NA	-16	517	any annotated donor/acceptor	FALSE	canonical	1	852	junction_9	152868.77386305897	NA	6	NA	TRUE	NA	NA	NA	C	coding	878	2637	204	2840	45.0	0	True	AATAAA	-19
PB.4703.16	chr17	+	4209	17	full-splice_match	RABEP1	ENST00000341923.10	2490	17	-203	-1516	-16	-1073	multi-exon	FALSE	canonical	1	11367	junction_15	127300.49375763434	NA	9	NA	TRUE	NA	NA	NA	C	coding	829	2490	204	2693	35.0	0	True	AATAAA	-23
PB.4703.15	chr17	+	3191	17	full-splice_match	RABEP1	ENST00000341923.10	2490	17	-205	-496	17	496	multi-exon	FALSE	canonical	1	11367	junction_15	127300.49375763434	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	206	2695	20.0	-2	True	ATTAAA	-22
PB.4703.14	chr17	+	5240	17	novel_in_catalog	RABEP1	novel	551	3	NA	NA	16	-3	no_combination_of_known_junctions	FALSE	canonical	1	1574	junction_12	128284.63106358881	NA	5	NA	TRUE	NA	NA	NA	C	coding	815	2448	207	2654	10.0	-3	True	ATTAAA	-17
PB.98.2	chr1	-	2030	4	novel_not_in_catalog	KIAA2013	novel	2815	3	NA	NA	4	115	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	154852.8645851352	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	833	1783	45.0	7	True	AATAAA	-16
PB.5520.3	chr18	-	7227	49	full-splice_match	RTTN	ENST00000640769.1	8088	49	82	779	82	-6	multi-exon	FALSE	canonical	1	43982	junction_30	29026.98647719881	NA	1	NA	TRUE	NA	NA	NA	C	coding	2226	6681	206	6886	50.0	-3	True	AATAAA	-18
PB.4703.19	chr17	+	3124	17	novel_in_catalog	RABEP1	novel	551	3	NA	NA	-16	493	no_combination_of_known_junctions	FALSE	canonical	1	10111	junction_3	123530.6223333409	NA	4	NA	TRUE	NA	NA	NA	C	coding	674	2025	607	2631	20.0	0	True	ATTAAA	-19
PB.4703.18	chr17	+	3160	17	novel_in_catalog	RABEP1	novel	551	3	NA	NA	-16	497	combination_of_known_junctions	FALSE	canonical	1	7784	junction_1	121337.4574452479	NA	1	NA	TRUE	NA	NA	NA	C	coding	819	2460	204	2663	20.0	0	True	ATTAAA	-23
PB.9797.1	chr6	+	3778	11	full-splice_match	BTN3A2	ENST00000377708.6	1634	11	-69	-2075	-9	-7	multi-exon	TRUE	canonical	1	66646	junction_2	74077.01525439588	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	231	1229	15.0	-3	True	AATAAA	-17
PB.5892.5	chr19	-	3122	2	novel_in_catalog	LINC00662	novel	562	3	NA	NA	31	2	intron_retention	FALSE	canonical	1	101253	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-17	True	NA	NA
PB.5892.4	chr19	-	2308	3	full-splice_match	LINC00662	ENST00000590523.1	2053	3	235	-490	235	490	multi-exon	FALSE	canonical	1	13788	junction_1	43732.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-7	True	NA	NA
PB.9797.7	chr6	+	2988	11	full-splice_match	BTN3A2	ENST00000356386.6	3017	11	22	7	-5	-7	multi-exon	FALSE	canonical	1	4434	junction_10	95877.51451200641	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	173	1171	15.0	4	True	AATAAA	-17
PB.8128.9	chr3	+	2898	23	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22527	18919	no_combination_of_known_junctions	FALSE	canonical	1	19078	junction_8	355586.9496845589	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	165	2390	5.0	-35	True	AAGAAA	-17
PB.9498.3	chr5	-	2703	11	novel_not_in_catalog	APBB3	novel	2064	8	NA	NA	-13	0	intron_retention	FALSE	canonical	1	28171	junction_2	89694.47385123567	NA	2	1	TRUE	NA	NA	NA	C	coding	121	366	1573	1938	20.0	3	True	AATAAA	-19
PB.9797.5	chr6	+	1853	11	novel_not_in_catalog	BTN3A2	novel	885	4	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	14243	junction_10	94027.86586374276	NA	13	4	TRUE	NA	NA	NA	C	coding	332	999	196	1194	15.0	-19	True	AATAAA	-17
PB.3498.1	chr14	-	2527	3	novel_in_catalog	AL122035.1	novel	550	2	NA	NA	-55285	-24539	intron_retention	FALSE	canonical	1	34017	junction_2	2554.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	86	261	190	450	95.0	-22	True	NA	NA
PB.3498.3	chr14	-	2015	3	full-splice_match	ZBTB25	ENST00000608382.5	10372	3	5	8352	5	436	multi-exon	FALSE	canonical	1	34017	junction_2	38829.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	188	1495	35.0	-20	True	NA	NA
PB.3498.2	chr14	-	2356	3	novel_in_catalog	ZBTB25	novel	1440	3	NA	NA	2	861	combination_of_known_junctions	FALSE	canonical	1	2487	junction_2	54594.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	104	1411	65.0	6	True	AATAAA	-37
PB.3498.5	chr14	-	2070	6	novel_not_in_catalog	ZBTB25	novel	1440	3	NA	NA	215	0	any annotated donor/acceptor	FALSE	canonical	1	1691	junction_3	39987.4297678658	NA	3	NA	TRUE	NA	NA	NA	C	coding	435	1308	679	1986	20.0	-12	True	CATAAA	-15
PB.3498.4	chr14	-	2416	5	novel_not_in_catalog	ZBTB25	novel	1440	3	NA	NA	40	432	any annotated donor/acceptor	FALSE	canonical	1	1314	junction_4	44242.81552057351	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	593	1900	35.0	15	True	NA	NA
PB.3498.7	chr14	-	1555	3	full-splice_match	ZBTB25	ENST00000608382.5	10372	3	28	8789	28	-1	multi-exon	FALSE	canonical	1	34017	junction_2	38829.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	165	1472	20.0	3	True	CATAAA	-14
PB.3498.6	chr14	-	2007	6	novel_not_in_catalog	ZBTB25	novel	1440	3	NA	NA	65	0	any annotated donor/acceptor	FALSE	canonical	1	582	junction_3	40033.03273847736	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	616	1923	20.0	40	True	CATAAA	-15
PB.3258.5	chr13	-	5439	52	full-splice_match	COL4A1	ENST00000375820.9	6616	52	45	1132	-31	-984	multi-exon	FALSE	canonical	1	479973	junction_51	173986.32288594125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1669	5010	162	5171	35.0	6952	False	AATAAA	-28
PB.3258.4	chr13	-	5808	52	full-splice_match	COL4A1	ENST00000375820.9	6616	52	32	776	32	-628	multi-exon	FALSE	canonical	1	479973	junction_51	173986.32288594125	NA	3	NA	TRUE	NA	NA	NA	C	coding	1669	5010	175	5184	65.0	6939	False	AATAAA	-19
PB.3258.2	chr13	-	6472	52	full-splice_match	COL4A1	ENST00000375820.9	6616	52	41	103	-35	-1	multi-exon	FALSE	canonical	1	479973	junction_51	173986.32288594125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1669	5010	166	5175	50.0	6948	False	AATAAA	-12
PB.3258.1	chr13	-	6576	52	full-splice_match	COL4A1	ENST00000375820.9	6616	52	39	1	-37	-1	multi-exon	FALSE	canonical	1	479973	junction_51	173986.32288594125	NA	9	NA	TRUE	NA	NA	NA	C	coding	1669	5010	168	5177	25.0	6946	False	AATAAA	-22
PB.861.1	chr1	-	3017	3	novel_not_in_catalog	AL121985.3	novel	523	2	NA	NA	-13254	2358	any annotated donor/acceptor	FALSE	canonical	1	2767	junction_1	262.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	TTTAAA	-45
PB.8118.8	chr3	+	2281	21	novel_in_catalog	APEH	novel	3220	22	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	48038	junction_2	296944.37400655955	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	220	2115	10.0	-8	True	AATAAA	-18
PB.11270.21	chr8	-	4102	10	full-splice_match	RNF19A	ENST00000341084.6	4285	10	193	-10	14	10	multi-exon	FALSE	canonical	1	178962	junction_9	102818.61271838546	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	455	2878	30.0	3322	False	AATAAA	-27
PB.8493.27	chr3	+	1869	16	full-splice_match	MFSD1	ENST00000264266.12	1594	16	-37	-238	3	191	multi-exon	FALSE	canonical	1	235512	junction_9	166393.49259017178	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	100	1497	55.0	-83	True	NA	NA
PB.11270.23	chr8	-	4153	11	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-41	2	intron_retention	FALSE	canonical	1	2937	junction_10	173933.19565859187	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	514	2937	40.0	-9	True	AATAAA	-19
PB.11470.6	chr9	+	1773	5	incomplete-splice_match	CNTLN	ENST00000380641.4	4871	7	-8	64573	-8	-64573	3prime_fragment	FALSE	canonical	1	87972	junction_1	15676.662692917138	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	134	964	75.0	-8	True	NA	NA
PB.8493.25	chr3	+	4073	16	full-splice_match	MFSD1	ENST00000622669.4	2361	16	128	-1840	3	1839	multi-exon	FALSE	canonical	1	235512	junction_9	166393.49259017178	NA	4	1	TRUE	NA	NA	NA	C	coding	465	1398	100	1497	25.0	-83	True	TATAAA	-24
PB.4225.2	chr16	-	2315	7	novel_not_in_catalog	AC020663.1	novel	556	5	NA	NA	-14630	-20202	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31015.44231507911	NA	1	1	TRUE	NA	NA	NA	B	coding	480	1443	278	1720	5.0	-34	True	NA	NA
PB.4225.3	chr16	-	3566	6	full-splice_match	ZNF500	ENST00000219478.10	5880	6	44	2270	42	283	multi-exon	FALSE	canonical	1	49074	junction_4	16475.450107356704	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	257	1699	75.0	-13	True	NA	NA
PB.4225.1	chr16	-	2318	7	novel_not_in_catalog	AC020663.1	novel	556	5	NA	NA	-14587	-20199	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	31015.44231507911	NA	1	NA	TRUE	NA	NA	NA	B	coding	480	1443	235	1677	0.0	9	True	NA	NA
PB.4225.4	chr16	-	3299	6	full-splice_match	ZNF500	ENST00000219478.10	5880	6	6	2575	4	0	multi-exon	FALSE	canonical	1	49074	junction_4	16475.450107356704	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	295	1737	100.0	-51	False	NA	NA
PB.11120.1	chr8	+	9629	5	full-splice_match	POMK	ENST00000331373.9	1865	5	-27	-7737	-15	7737	multi-exon	FALSE	canonical	1	86036	junction_2	21068.37946277549	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	283	1335	40.0	-1	True	NA	NA
PB.11120.3	chr8	+	9201	5	full-splice_match	POMK	ENST00000331373.9	1865	5	-8	-7328	4	7328	multi-exon	FALSE	canonical	1	86036	junction_2	21068.37946277549	NA	16	NA	TRUE	NA	NA	NA	C	coding	350	1053	264	1316	100.0	-5	True	NA	NA
PB.11120.2	chr8	+	4222	5	full-splice_match	POMK	ENST00000331373.9	1865	5	-9	-2348	3	2348	multi-exon	FALSE	canonical	1	86036	junction_2	21068.37946277549	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	265	1317	35.0	-6	True	AATAAA	-17
PB.1523.1	chr10	-	1698	9	novel_in_catalog	ACTA2	novel	1349	9	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	1	86303	junction_8	1595995.3184288323	NA	0	NA	TRUE	NA	NA	NA	B	coding	377	1134	418	1551	10.0	-2	True	AATAAA	-20
PB.1523.2	chr10	-	1613	9	novel_in_catalog	ACTA2	novel	1349	9	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	26390	junction_8	1612723.0061481758	NA	0	NA	TRUE	NA	NA	NA	B	coding	377	1134	333	1466	10.0	0	True	AATAAA	-20
PB.1523.3	chr10	-	2915	1	genic	ACTA2	novel	NA	NA	NA	NA	-19	-40202	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-28	True	NA	NA
PB.7723.1	chr22	+	1658	2	full-splice_match	YWHAH	ENST00000248975.5	1825	2	166	1	105	-1	multi-exon	FALSE	canonical	1	1716753	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	246	741	108	848	10.0	-5489	False	AATAAA	-19
PB.10624.1	chr7	+	2615	8	incomplete-splice_match	MDH2	ENST00000315758.9	2209	9	0	919	0	-478	intron_retention	FALSE	canonical	1	2608193	junction_1	750216.7001218204	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	95	1018	15.0	-39	True	AATAAA	-17
PB.10624.3	chr7	+	2169	9	full-splice_match	MDH2	ENST00000315758.9	2209	9	37	3	19	-1	multi-exon	FALSE	canonical	1	2608193	junction_1	707715.815560338	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	58	1074	15.0	-2	True	AATAAA	-20
PB.10624.2	chr7	+	1276	9	full-splice_match	MDH2	ENST00000315758.9	2209	9	35	898	17	-457	multi-exon	FALSE	canonical	1	2608193	junction_1	707715.815560338	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	60	1076	15.0	-4	True	AATAAA	-38
PB.7368.7	chr20	-	2130	10	full-splice_match	AURKA	ENST00000371356.6	2112	10	-18	0	1	0	multi-exon	FALSE	canonical	1	3123	junction_9	157762.81472874337	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	151	1362	15.0	0	True	AATAAA	-15
PB.6675.2	chr2	-	2425	1	intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	9272	False	NA	NA
PB.6675.1	chr2	-	3538	4	intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	495	junction_1	696.8813066480946	NA	3	NA	FALSE	NA	NA	NA	A	coding	139	420	1759	2178	25.0	6	True	NA	NA
PB.7368.6	chr20	-	2143	10	full-splice_match	AURKA	ENST00000312783.10	2223	10	80	0	0	0	multi-exon	FALSE	canonical	1	66051	junction_9	150229.76004995374	NA	1	1	TRUE	NA	NA	NA	C	coding	403	1212	164	1375	15.0	-1	True	AATAAA	-15
PB.8656.4	chr4	+	4493	14	full-splice_match	UVSSA	ENST00000511216.5	2927	14	-34	-1532	-34	-105	multi-exon	FALSE	canonical	1	9939	junction_1	18496.080783002675	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	381	2510	80.0	0	True	NA	NA
PB.7368.5	chr20	-	2247	9	full-splice_match	AURKA	ENST00000347343.6	2248	9	1	0	1	0	multi-exon	FALSE	canonical	1	60561	junction_8	152568.73392707098	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	268	1479	15.0	10	True	AATAAA	-15
PB.8656.2	chr4	+	2706	2	novel_not_in_catalog	UVSSA	novel	2927	14	NA	NA	-65	-4448	intron_retention	FALSE	canonical	1	13128	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	coding	129	390	2053	2442	90.0	-31	True	NA	NA
PB.8656.3	chr4	+	4245	14	novel_not_in_catalog	UVSSA	novel	2927	14	NA	NA	-62	-1	any annotated donor/acceptor	FALSE	canonical	1	13128	junction_1	17769.616205609913	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	29	2158	20.0	-28	True	NA	NA
PB.6194.7	chr19	-	4291	7	full-splice_match	ZNF160	ENST00000599056.5	4229	7	-71	9	0	0	multi-exon	FALSE	canonical	1	905	junction_5	62066.048164882835	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	373	2829	35.0	-1	True	AATAAA	-19
PB.6194.6	chr19	-	4323	7	full-splice_match	ZNF160	ENST00000429604.5	4336	7	12	1	0	0	multi-exon	FALSE	canonical	1	37625	junction_5	53347.064162946735	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	405	2861	35.0	-1	True	AATAAA	-19
PB.6194.5	chr19	-	4360	7	novel_in_catalog	ZNF160	novel	4229	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	9902	junction_5	59757.8099405332	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	442	2898	35.0	-14	True	AATAAA	-19
PB.6194.4	chr19	-	4487	6	novel_in_catalog	ZNF160	novel	4229	7	NA	NA	-43	0	intron_retention	FALSE	canonical	1	45496	junction_4	48379.05086129739	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	569	3025	35.0	-58	False	AATAAA	-19
PB.6194.3	chr19	-	4882	6	full-splice_match	ZNF160	ENST00000418871.5	4219	6	12	-675	0	667	multi-exon	FALSE	canonical	1	44121	junction_4	48792.09446457489	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	288	2744	90.0	-1	True	NA	NA
PB.6194.2	chr19	-	5196	6	full-splice_match	ZNF160	ENST00000418871.5	4219	6	14	-991	2	983	multi-exon	FALSE	canonical	1	44121	junction_4	48792.09446457489	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	286	2742	95.0	1	True	NA	NA
PB.6194.1	chr19	-	5419	6	novel_not_in_catalog	ZNF160	novel	4229	7	NA	NA	0	983	intron_retention	FALSE	non_canonical	0	0	junction_4	63164.250377567216	NA	12	1	TRUE	NA	NA	NA	C	coding	818	2457	509	2965	95.0	-1	True	NA	NA
PB.11282.37	chr8	-	3297	21	incomplete-splice_match	UBR5	ENST00000521922.5	9008	59	12	50912	12	-6243	3prime_fragment	FALSE	canonical	1	98900	junction_13	88975.14679890953	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2784	514	3297	70.0	-2	True	NA	NA
PB.5230.16	chr17	-	2150	5	novel_in_catalog	NAT9	novel	1875	7	NA	NA	-2	9	intron_retention	FALSE	canonical	1	128809	junction_3	115867.61300510165	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	97	504	35.0	-17	True	TATAAA	-9
PB.5230.15	chr17	-	1768	6	full-splice_match	NAT9	ENST00000583757.5	583	6	-12	-1173	-3	-8	multi-exon	FALSE	canonical	1	25393	junction_1	138477.42886896766	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	98	517	30.0	-18	True	TATAAA	-12
PB.5230.14	chr17	-	1820	6	novel_not_in_catalog	NAT9	novel	1875	7	NA	NA	0	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154389.79010465686	NA	3	NA	TRUE	NA	NA	NA	C	coding	135	408	105	512	30.0	-25	True	TATAAA	-12
PB.5230.13	chr17	-	1874	7	full-splice_match	NAT9	ENST00000580301.5	1860	7	-2	-12	1	-8	multi-exon	FALSE	canonical	1	215156	junction_5	92778.30983945906	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	85	705	30.0	-5	True	TATAAA	-12
PB.5230.12	chr17	-	1985	7	novel_in_catalog	NAT9	novel	1875	7	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	1	34325	junction_3	140069.03187287887	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	78	416	30.0	2	True	TATAAA	-12
PB.5230.10	chr17	-	2409	6	novel_in_catalog	NAT9	novel	1875	7	NA	NA	0	-8	intron_retention	FALSE	canonical	1	128809	junction_4	122135.27284875569	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	875	1240	30.0	-1	True	TATAAA	-12
PB.198.4	chr1	+	2925	20	incomplete-splice_match	RPS6KA1	ENST00000531382.5	2359	21	1012	-747	-36	-2	5prime_fragment	FALSE	canonical	1	384038	junction_9	124875.36732278307	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	172	2103	20.0	-7343	False	AATAAA	-12
PB.2625.1	chr12	-	2868	11	full-splice_match	SPRYD3	ENST00000301463.8	2932	11	7	57	7	-57	multi-exon	FALSE	canonical	1	321819	junction_8	91481.95323477741	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	123	1409	40.0	-32	False	NA	NA
PB.2625.2	chr12	-	2921	10	novel_in_catalog	SPRYD3	novel	2932	11	NA	NA	-4	-282	intron_retention	FALSE	canonical	1	321819	junction_7	96017.53160301405	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	590	1687	30.0	0	True	GATAAA	-22
PB.2625.3	chr12	-	2618	11	full-splice_match	SPRYD3	ENST00000301463.8	2932	11	28	286	-4	-286	multi-exon	FALSE	canonical	1	321819	junction_8	91481.95323477741	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	102	1388	30.0	-11	True	GATAAA	-18
PB.11282.32	chr8	-	8334	49	novel_not_in_catalog	UBR5	novel	10297	59	NA	NA	-31	835	any annotated donor/acceptor	FALSE	canonical	1	52929	junction_2	136467.8017766065	NA	2	NA	TRUE	NA	NA	NA	C	coding	2358	7077	487	7563	45.0	-21	True	AATAAA	-19
PB.5396.1	chr18	-	2747	1	novel_in_catalog	PIEZO2	novel	9356	51	NA	NA	-60218	-91099	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	176	False	TTTAAA	-45
PB.11282.33	chr8	-	7778	49	incomplete-splice_match	UBR5	ENST00000220959.8	9418	59	-30	17190	-30	268	3prime_fragment	FALSE	canonical	1	132976	junction_41	129252.03671927804	NA	0	NA	TRUE	NA	NA	NA	C	coding	2362	7089	486	7574	35.0	-20	True	AATAAA	-21
PB.3317.11	chr14	-	2588	16	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	527322	junction_1	155256.32138441972	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	619	2214	15.0	-1	True	AATAAA	-19
PB.3317.10	chr14	-	2498	17	full-splice_match	PRMT5	ENST00000324366.12	2531	17	13	20	13	-1	multi-exon	FALSE	canonical	1	527322	junction_1	152477.93639936688	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	221	2125	15.0	-197	False	AATAAA	-18
PB.3317.13	chr14	-	2061	17	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	34795	junction_15	330729.7799336151	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	23	1795	15.0	1	True	AATAAA	-19
PB.3317.12	chr14	-	2385	16	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	1	0	intron_retention	FALSE	canonical	1	527322	junction_1	147598.16833410304	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	21	1214	15.0	3	True	AATAAA	-19
PB.3317.15	chr14	-	1991	14	novel_not_in_catalog	PRMT5	novel	2531	17	NA	NA	360	0	intron_retention	FALSE	canonical	0	0	junction_13	293822.1611314044	NA	3	NA	TRUE	NA	NA	NA	C	coding	485	1458	160	1617	15.0	2139	False	AATAAA	-19
PB.6073.1	chr19	-	1666	3	full-splice_match	ZNF296	ENST00000303809.6	1744	3	78	0	77	0	multi-exon	FALSE	canonical	1	54497	junction_1	88386.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	475	1428	138	1565	10.0	-1	True	AGTAAA	-17
PB.198.1	chr1	+	3161	22	full-splice_match	RPS6KA1	ENST00000374168.6	3186	22	23	2	12	-2	multi-exon	FALSE	canonical	1	92765	junction_1	167491.8605978259	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	132	2339	20.0	29	True	AATAAA	-12
PB.8814.4	chr4	+	2508	7	full-splice_match	DCK	ENST00000503359.5	2683	7	20	155	20	-155	multi-exon	FALSE	canonical	1	12949	junction_1	173218.68996677455	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	561	1127	45.0	-66	True	AATAAA	-14
PB.198.2	chr1	+	3034	21	full-splice_match	RPS6KA1	ENST00000530003.5	3023	21	2	-13	2	2	multi-exon	FALSE	canonical	1	29728	junction_1	167919.09209747415	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	49	2208	15.0	2	True	AATAAA	-16
PB.2163.1	chr11	+	5062	1	incomplete-splice_match	RNF169	ENST00000299563.4	7823	6	88476	8	852	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	144	435	1022	1456	25.0	-3465	False	AGTAAA	-12
PB.198.3	chr1	+	3123	21	full-splice_match	RPS6KA1	ENST00000531382.5	2359	21	-10	-754	0	0	multi-exon	FALSE	canonical	1	159625	junction_1	149827.27570268206	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	60	2294	10.0	-14	True	AATAAA	-19
PB.7981.19	chr3	-	4249	29	novel_not_in_catalog	TOP2B	novel	5358	36	NA	NA	-3834	-13	any annotated donor/acceptor	FALSE	canonical	1	7257	junction_27	363792.0291159652	NA	2	NA	TRUE	NA	NA	NA	C	coding	1225	3678	264	3941	35.0	9749	False	AATGAA	-12
PB.6489.40	chr2	-	5084	26	novel_in_catalog	XPO1	novel	4915	25	NA	NA	1	0	intron_retention	FALSE	canonical	1	11157	junction_24	425331.4000258415	NA	2	NA	TRUE	NA	NA	NA	C	coding	1027	3084	1116	4199	20.0	329	False	AATAAA	-15
PB.6669.1	chr2	+	3227	4	full-splice_match	TMEM182	ENST00000488134.5	624	4	-30	-2573	5	11	multi-exon	FALSE	canonical	1	3532	junction_3	38586.06630493563	NA	0	NA	TRUE	NA	NA	NA	A	coding	87	264	255	518	25.0	-19	True	AATATA	-8
PB.10290.11	chr6	-	1362	7	full-splice_match	MTRF1L	ENST00000464135.5	3651	7	5	2284	5	1539	multi-exon	FALSE	canonical	1	1972	junction_5	8503.132651493148	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	397	1113	45.0	8	True	NA	NA
PB.6489.43	chr2	-	4730	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-91	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	6	NA	TRUE	NA	NA	NA	C	coding	1067	3204	643	3846	15.0	-26	True	AATAAA	-14
PB.2485.1	chr12	+	3601	1	full-splice_match	H2AFJ	ENST00000544848.2	644	1	24	-2981	-12	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	129	390	65	454	5.0	2	True	ATTAAA	-21
PB.6489.42	chr2	-	4790	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-51	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	3	1	TRUE	NA	NA	NA	C	coding	1067	3204	703	3906	15.0	14	True	AATAAA	-14
PB.1758.4	chr11	-	3276	4	novel_in_catalog	TOLLIP	novel	3617	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	137	junction_2	286572.3739034638	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	122	610	15.0	3	True	AATAAA	-19
PB.1758.5	chr11	-	3019	6	full-splice_match	TOLLIP	ENST00000317204.10	3617	6	-20	618	2	-616	multi-exon	FALSE	canonical	1	275793	junction_5	204051.32765517602	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	145	969	15.0	-20	True	ATTAAA	-20
PB.1758.6	chr11	-	2364	6	full-splice_match	TOLLIP	ENST00000317204.10	3617	6	-15	1268	7	14	multi-exon	FALSE	canonical	1	275793	junction_5	204051.32765517602	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	140	964	10.0	-15	True	GATAAA	-19
PB.1758.7	chr11	-	1393	6	full-splice_match	TOLLIP	ENST00000317204.10	3617	6	-30	2254	2	192	multi-exon	FALSE	canonical	1	275793	junction_5	204051.32765517602	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	155	979	20.0	-30	False	AATAGA	-23
PB.1758.1	chr11	-	3510	5	full-splice_match	TOLLIP	ENST00000530541.1	684	5	-38	-2788	-7	4	multi-exon	FALSE	canonical	1	12954	junction_4	337174.9228800794	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	164	838	10.0	-39	False	AATAAA	-25
PB.1758.2	chr11	-	3598	6	full-splice_match	TOLLIP	ENST00000317204.10	3617	6	-18	37	4	-35	multi-exon	FALSE	canonical	1	275793	junction_5	204051.32765517602	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	143	967	65.0	-18	True	AATAAA	-11
PB.2706.1	chr12	-	5360	11	full-splice_match	B4GALNT1	ENST00000341156.8	3036	11	161	-2485	8	0	multi-exon	FALSE	canonical	1	36545	junction_2	30497.23926849773	NA	0	NA	TRUE	NA	NA	NA	A	coding	533	1602	425	2026	15.0	4	True	NA	NA
PB.12072.1	chrX	-	3871	24	novel_in_catalog	GRIPAP1	novel	2828	12	NA	NA	-1	1	intron_retention	TRUE	canonical	1	306130	junction_23	87461.14793436123	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	35	2302	0.0	0	True	NA	NA
PB.12072.3	chrX	-	3106	27	novel_not_in_catalog	GRIPAP1	novel	2828	12	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	13945	junction_14	142034.05531960996	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	34	2634	5.0	1	True	NA	NA
PB.12072.4	chrX	-	3769	25	novel_not_in_catalog	GRIPAP1	novel	2828	12	NA	NA	-1	1	intron_retention	FALSE	canonical	1	10610	junction_10	121972.09847747251	NA	2	NA	TRUE	NA	NA	NA	C	coding	806	2421	35	2455	5.0	0	True	NA	NA
PB.12072.5	chrX	-	3739	25	novel_in_catalog	GRIPAP1	novel	2828	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	306130	junction_24	87094.19313353558	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	36	2426	5.0	-1	True	NA	NA
PB.12072.6	chrX	-	3028	26	full-splice_match	GRIPAP1	ENST00000376423.8	3031	26	1	2	-1	-2	multi-exon	FALSE	canonical	1	306130	junction_25	88664.63911205188	NA	6	NA	TRUE	NA	NA	NA	C	coding	841	2526	35	2560	10.0	0	True	NA	NA
PB.12072.7	chrX	-	3159	25	novel_in_catalog	GRIPAP1	novel	2828	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	306130	junction_24	89254.36726274081	NA	2	NA	TRUE	NA	NA	NA	C	coding	755	2268	35	2302	5.0	0	True	NA	NA
PB.12072.8	chrX	-	3127	27	novel_not_in_catalog	GRIPAP1	novel	2828	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	2620	junction_6	146023.89692306405	NA	7	NA	TRUE	NA	NA	NA	C	coding	873	2622	36	2657	5.0	-1	True	NA	NA
PB.11594.9	chr9	+	5848	22	incomplete-splice_match	TJP2	ENST00000377245.9	4503	23	-44	7	-44	0	intron_retention	FALSE	canonical	1	119621	junction_1	126240.18037864073	NA	1	NA	TRUE	NA	NA	NA	C	coding	1136	3411	141	3551	15.0	-49	True	AATAAA	-21
PB.11241.12	chr8	-	3860	13	full-splice_match	VIRMA	ENST00000421249.2	3924	13	62	2	56	-2	multi-exon	FALSE	canonical	1	184214	junction_10	40838.77293972264	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	21	3464	30.0	-1	True	ATTAAA	-35
PB.1110.2	chr1	+	2768	13	full-splice_match	PPP2R5A	ENST00000261461.6	3128	13	358	2	358	-2	multi-exon	FALSE	canonical	1	248262	junction_1	89909.46653702391	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	217	1677	10.0	-20	True	AATAAA	-22
PB.6772.1	chr2	-	6568	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-36	-2	1	0	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	145	1455	20.0	1	True	TATAAA	-17
PB.6326.1	chr2	-	4013	12	full-splice_match	FAM49A	ENST00000381323.7	4670	12	-25	682	-25	-682	multi-exon	FALSE	canonical	1	84762	junction_11	34456.27783435622	NA	0	NA	TRUE	NA	NA	NA	A	coding	323	972	247	1218	25.0	0	True	AATAAA	-15
PB.10999.32	chr8	+	6514	40	novel_in_catalog	PCM1	novel	6820	39	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	45228	junction_24	235820.67163418344	NA	0	NA	TRUE	NA	NA	NA	C	coding	2043	6132	290	6421	30.0	-3	True	AATAAA	-23
PB.9801.10	chr6	+	4842	8	incomplete-splice_match	BTN2A1	ENST00000377600.7	3024	9	33	8	5	-8	intron_retention	FALSE	canonical	1	54873	junction_3	60231.72771581978	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	219	674	30.0	0	True	NA	NA
PB.9801.13	chr6	+	3574	9	novel_not_in_catalog	BTN2A1	novel	2845	7	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	364	junction_8	75370.83563278554	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	212	667	20.0	7	True	NA	NA
PB.10279.1	chr6	-	3587	7	full-splice_match	LRP11	ENST00000239367.6	3260	7	-324	-3	-324	3	multi-exon	FALSE	canonical	1	127305	junction_6	108708.79402892031	NA	0	NA	TRUE	NA	NA	NA	A	coding	500	1503	331	1833	15.0	-3	True	AATAAA	-19
PB.11819.1	chr9	-	1436	8	full-splice_match	TRUB2	ENST00000372890.5	5719	8	277	4006	-52	526	multi-exon	FALSE	canonical	1	457771	junction_7	105222.97916174712	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	58	1053	75.0	-25	False	NA	NA
PB.11819.2	chr9	-	1963	7	novel_in_catalog	TRUB2	novel	5719	8	NA	NA	-34	566	intron_retention	FALSE	canonical	1	457771	junction_6	59187.1504607771	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	1118	1540	70.0	-7	True	AATAAA	-17
PB.6267.1	chr19	-	2536	3	novel_not_in_catalog	AC020915.3	novel	2708	2	NA	NA	67	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	41273.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	158	477	1062	1538	0.0	0	True	NA	NA
PB.3382.4	chr14	-	5627	26	novel_not_in_catalog	BAZ1A	novel	5920	26	NA	NA	291	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	129004.62593686477	NA	1	NA	TRUE	NA	NA	NA	C	coding	1524	4575	282	4856	40.0	3	True	AATAAA	-14
PB.3565.1	chr14	-	3032	10	novel_not_in_catalog	RPS6KL1	novel	5195	11	NA	NA	9	0	intron_retention	FALSE	canonical	1	16	junction_5	22194.282627695466	NA	2	NA	TRUE	NA	NA	NA	A	coding	164	495	1168	1662	5.0	-12	True	AATAAA	-15
PB.745.2	chr1	+	4685	10	novel_not_in_catalog	ZNF687	novel	893	2	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	1	8117	junction_1	121830.00845805145	NA	1	NA	TRUE	NA	NA	NA	C	coding	1237	3714	277	3990	10.0	-31	True	ATTAAA	-22
PB.1994.1	chr11	-	1625	5	full-splice_match	B3GAT3	ENST00000265471.9	1641	5	15	1	-6	0	multi-exon	FALSE	canonical	1	82709	junction_3	108599.03754033688	NA	0	NA	TRUE	NA	NA	NA	A	coding	335	1008	214	1221	5.0	-7	True	AATAAA	-15
PB.4316.1	chr16	+	2859	18	novel_not_in_catalog	PRKCB	novel	2744	17	NA	NA	13	-4973	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	167256.06382130526	NA	3	NA	TRUE	NA	NA	NA	B	coding	544	1635	403	2037	85.0	-24	True	NA	NA
PB.9398.5	chr5	-	2135	9	full-splice_match	PGGT1B	ENST00000419445.5	9545	9	4	7406	-3	984	multi-exon	FALSE	canonical	1	27623	junction_5	64538.18892318234	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	18	1151	40.0	-10	True	ATTAAA	-31
PB.9398.6	chr5	-	1960	9	full-splice_match	PGGT1B	ENST00000419445.5	9545	9	5	7580	-2	810	multi-exon	FALSE	canonical	1	27623	junction_5	64538.18892318234	NA	2	1	TRUE	NA	NA	NA	C	coding	377	1134	17	1150	45.0	-9	True	NA	NA
PB.4316.2	chr16	+	2971	18	novel_not_in_catalog	PRKCB	novel	2744	17	NA	NA	1	-4973	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	191299.83639780505	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	131	2149	85.0	1	True	NA	NA
PB.9398.1	chr5	-	4803	9	full-splice_match	PGGT1B	ENST00000419445.5	9545	9	14	4728	7	3662	multi-exon	FALSE	canonical	1	27623	junction_5	64538.18892318234	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	8	1141	65.0	0	True	NA	NA
PB.9398.2	chr5	-	4601	9	full-splice_match	PGGT1B	ENST00000419445.5	9545	9	-6	4950	-6	3440	multi-exon	FALSE	canonical	1	27623	junction_5	64538.18892318234	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	28	1161	70.0	-20	True	NA	NA
PB.10907.3	chr7	-	2343	10	full-splice_match	PDIA4	ENST00000286091.8	2903	10	174	386	1	-386	multi-exon	FALSE	canonical	1	1112324	junction_9	539480.0569474278	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	60	1997	25.0	0	True	NA	NA
PB.11722.13	chr9	-	6541	13	full-splice_match	PTBP3	ENST00000343327.6	2755	13	-97	-3689	-8	-537	multi-exon	FALSE	canonical	1	71676	junction_11	154407.44877656485	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	331	1662	70.0	-57	False	NA	NA
PB.11302.3	chr8	+	1592	7	full-splice_match	EBAG9	ENST00000337573.9	2379	7	-49	836	-49	0	multi-exon	FALSE	canonical	1	118973	junction_1	134609.2463892144	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	350	991	40.0	-56	True	ATTAAA	-22
PB.11302.2	chr8	+	1397	7	full-splice_match	EBAG9	ENST00000337573.9	2379	7	-49	1031	-49	-195	multi-exon	FALSE	canonical	1	118973	junction_1	134609.2463892144	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	350	991	10.0	-56	True	AATAAA	-15
PB.11302.1	chr8	+	1580	7	full-splice_match	EBAG9	ENST00000395785.6	1467	7	12	-125	12	125	multi-exon	FALSE	canonical	1	16652	junction_1	168216.29056432738	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	213	854	40.0	1	True	ACTAAA	-36
PB.8346.10	chr3	-	3134	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	29	-2	any annotated donor/acceptor	FALSE	canonical	1	28533	junction_8	150617.71673614628	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	132	2696	40.0	-12	True	AATAAA	-17
PB.6747.1	chr2	+	3388	6	intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11535	junction_5	47778.48337316705	NA	106	3	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-46	False	NA	NA
PB.11044.10	chr8	+	2480	11	novel_in_catalog	PPP2R2A	novel	3940	10	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	1878	junction_1	302592.89217256906	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	898	1764	15.0	-1593	False	AATAAA	-16
PB.10907.2	chr7	-	4867	9	novel_in_catalog	PDIA4	novel	2903	10	NA	NA	-34	-2	intron_retention	FALSE	canonical	1	1112324	junction_8	537318.0772035633	NA	3	1	TRUE	NA	NA	NA	C	coding	397	1194	95	1288	50.0	-35	True	AATAAA	-18
PB.3446.8	chr14	-	6151	5	novel_in_catalog	GMFB	novel	6721	4	NA	NA	6	0	intron_retention	FALSE	canonical	1	234805	junction_2	47619.53940348436	NA	3	NA	TRUE	NA	NA	NA	C	coding	90	273	48	320	30.0	5	True	AATAAA	-12
PB.37.2	chr1	-	2584	19	full-splice_match	PANK4	ENST00000378466.7	2677	19	25	68	-6	-64	multi-exon	FALSE	canonical	1	116855	junction_10	48442.90977589554	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	17	2338	25.0	-8	True	NA	NA
PB.37.1	chr1	-	3024	18	novel_in_catalog	PANK4	novel	2677	19	NA	NA	-11	-1	intron_retention	TRUE	canonical	1	57351	junction_4	53536.767638543424	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	865	2271	15.0	-13	True	AATAGA	-17
PB.37.5	chr1	-	2567	18	novel_in_catalog	PANK4	novel	2677	19	NA	NA	-15	-7	combination_of_known_junctions	FALSE	canonical	1	3512	junction_17	63315.76391624425	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	384	2264	35.0	-17	True	AATAGA	-7
PB.37.4	chr1	-	3036	18	novel_in_catalog	PANK4	novel	2677	19	NA	NA	0	-7	intron_retention	FALSE	canonical	1	116855	junction_10	42596.032940276666	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	853	2733	35.0	-1	True	AATAGA	-7
PB.11027.2	chr8	-	2065	2	novel_not_in_catalog	EGR3	novel	4336	2	NA	NA	-178	-65	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-1	True	AGTAAA	-25
PB.3446.1	chr14	-	4175	7	full-splice_match	GMFB	ENST00000358056.7	4301	7	120	6	-50	0	multi-exon	FALSE	canonical	1	221653	junction_3	45619.978118753585	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	150	578	30.0	-52	False	AATAAA	-12
PB.3446.2	chr14	-	4564	6	novel_in_catalog	GMFB	novel	6721	4	NA	NA	12	0	intron_retention	FALSE	canonical	1	234805	junction_3	42614.52235846367	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	11	True	AATAAA	-12
PB.3446.3	chr14	-	4206	7	novel_in_catalog	GMFB	novel	6721	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	10560	junction_6	94493.39205189019	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	280	609	30.0	160	False	AATAAA	-12
PB.3446.4	chr14	-	4202	7	novel_in_catalog	GMFB	novel	6721	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	3700	junction_3	112027.12382635535	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-11	True	AATAAA	-12
PB.3446.5	chr14	-	4086	6	full-splice_match	GMFB	ENST00000628554.2	639	6	-80	-3367	-11	0	multi-exon	FALSE	canonical	1	3941	junction_4	121576.06234386767	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-13	True	AATAAA	-12
PB.11805.1	chr9	-	3106	11	novel_in_catalog	SH2D3C	novel	2750	11	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	1	7425	junction_9	50075.98175183388	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	1158	2678	5.0	-1	True	AATAAA	-16
PB.8346.11	chr3	-	3147	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	canonical	1	11683	junction_2	149445.82651680172	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	128	2092	40.0	-8	True	AATAAA	-17
PB.9982.1	chr6	+	2718	5	incomplete-splice_match	NCR2	ENST00000373083.8	1154	6	-82	6171	-82	-6171	3prime_fragment	FALSE	canonical	1	4274	junction_4	2252.893306395134	NA	3	NA	TRUE	NA	NA	NA	A	coding	274	825	281	1105	20.0	-71	False	NA	NA
PB.3366.4	chr14	+	5235	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	24	545	-11	-545	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	131	2251	35.0	-11	True	ATTAAA	-25
PB.6057.5	chr19	+	4976	5	novel_not_in_catalog	ZNF226	novel	548	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	130785.84030271588	NA	4	NA	TRUE	NA	NA	NA	C	coding	803	2412	2556	4967	30.0	0	True	TATAAA	-14
PB.1832.13	chr11	-	2944	3	novel_not_in_catalog	PSMA1	novel	1266	11	NA	NA	-25	6992	any annotated donor/acceptor	FALSE	canonical	1	10422	junction_1	19419.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1	True	ATTAAA	-16
PB.6057.1	chr19	+	2747	6	full-splice_match	ZNF226	ENST00000586914.5	576	6	-18	-2153	-1	0	multi-exon	FALSE	canonical	1	27989	junction_1	109837.17293047922	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	327	2738	30.0	-21	True	TATAAA	-14
PB.6057.3	chr19	+	2559	6	full-splice_match	ZNF226	ENST00000337433.9	2565	6	6	0	1	0	multi-exon	FALSE	canonical	1	76922	junction_5	97449.93669161618	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	139	2550	30.0	-2	True	TATAAA	-14
PB.1832.12	chr11	-	1928	3	novel_not_in_catalog	PSMA1	novel	1266	11	NA	NA	-32	11386	any annotated donor/acceptor	FALSE	canonical	1	2964	junction_1	23148.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-6	True	NA	NA
PB.1832.11	chr11	-	1691	9	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-25	-11095	intron_retention	FALSE	canonical	1	1418528	junction_1	548105.2596307916	NA	0	NA	TRUE	NA	NA	NA	B	coding	124	375	1003	1377	10.0	16	True	AATAAA	-18
PB.11558.1	chr9	+	2598	2	antisense	novelGene_FGF7P3_AS_novelGene_BX664615.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	198	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.4299.3	chr16	-	4097	26	novel_in_catalog	SMG1P3	novel	3194	19	NA	NA	-394	-2090	no_combination_of_known_junctions	FALSE	canonical	1	87	junction_3	46808.167562099676	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1893	2203	4095	60.0	-4	True	NA	NA
PB.4299.2	chr16	-	4620	29	novel_in_catalog	NPIPB3	novel	581	5	NA	NA	-53735	-21964	no_combination_of_known_junctions	FALSE	canonical	1	87	junction_6	44503.29718036035	NA	9	1	TRUE	NA	NA	NA	B	coding	645	1938	2225	4162	25.0	-26	False	ATTAAA	-16
PB.4299.1	chr16	-	4567	28	novel_in_catalog	NPIPB3	novel	581	5	NA	NA	-53720	-21963	no_combination_of_known_junctions	FALSE	canonical	1	87	junction_6	44852.35120127571	NA	6	1	TRUE	NA	NA	NA	B	coding	645	1938	2171	4108	25.0	-11	True	ATTAAA	-17
PB.1832.10	chr11	-	1887	8	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	0	-11095	intron_retention	FALSE	canonical	1	35328	junction_7	770268.3497510488	NA	0	NA	TRUE	NA	NA	NA	B	coding	124	375	1199	1573	10.0	41	True	AATAAA	-18
PB.4299.7	chr16	-	2544	1	full-splice_match	SLC7A5P2	ENST00000553010.2	536	1	-89	-1919	-89	1919	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	A	coding	221	666	90	755	100.0	0	True	NA	NA
PB.4299.6	chr16	-	2022	12	novel_in_catalog	SMG1P3	novel	3194	19	NA	NA	-10	-1523	combination_of_known_junctions	FALSE	canonical	1	357	junction_4	66562.73464637181	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	90	632	65.0	0	True	NA	NA
PB.4299.5	chr16	-	2369	13	novel_in_catalog	SMG1P3	novel	3194	19	NA	NA	-406	-343	no_combination_of_known_junctions	FALSE	canonical	1	180	junction_1	58244.49155356525	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	728	1591	25.0	-16	True	AATAAA	-24
PB.4299.4	chr16	-	2452	12	full-splice_match	SMG1P3	ENST00000522841.6	2774	12	-13	335	-13	-335	multi-exon	FALSE	canonical	1	180	junction_1	60535.52079305133	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	803	1666	10.0	-3	True	AATAAA	-32
PB.10359.1	chr7	-	1253	4	full-splice_match	C7orf50	ENST00000412051.5	1147	4	-97	-9	-84	-1	multi-exon	FALSE	canonical	1	401646	junction_3	278802.9939951626	NA	0	NA	TRUE	NA	NA	NA	C	coding	65	198	438	635	5.0	-68	False	AATAAA	-16
PB.4588.2	chr16	+	4844	15	novel_in_catalog	GSE1	novel	2683	3	NA	NA	28	232	combination_of_known_junctions	FALSE	canonical	1	46640	junction_1	110484.08379287498	NA	7	NA	TRUE	NA	NA	NA	C	coding	1154	3465	333	3797	20.0	-2	True	ATTAAA	-24
PB.10359.3	chr7	-	2471	4	incomplete-splice_match	C7orf50	ENST00000357429.10	1294	5	-7	1495	-4	-848	3prime_fragment	FALSE	canonical	1	217413	junction_3	365034.43450264615	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	78	605	100.0	-18	True	NA	NA
PB.10359.4	chr7	-	4239	2	incomplete-splice_match	C7orf50	ENST00000412051.5	1147	4	-16	8987	-3	-8370	3prime_fragment	FALSE	canonical	1	401646	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	269	810	2475	3284	65.0	13	True	NA	NA
PB.10359.5	chr7	-	4694	2	full-splice_match	C7orf50	ENST00000465681.1	2621	2	-43	-2030	-43	2030	multi-exon	FALSE	canonical	1	12105	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	3260	3652	40.0	-27	False	NA	NA
PB.10359.6	chr7	-	2580	2	full-splice_match	C7orf50	ENST00000465681.1	2621	2	32	9	19	-9	multi-exon	FALSE	canonical	1	12105	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	2234	2575	25.0	-1	True	AATAAA	-16
PB.10359.7	chr7	-	2903	1	novel_in_catalog	C7orf50	novel	1294	5	NA	NA	30066	-69918	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	2496	2828	55.0	NA	False	AATAAA	-20
PB.3366.2	chr14	+	3391	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	16	2397	16	-559	multi-exon	TRUE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	139	2259	35.0	-19	False	NA	NA
PB.10999.37	chr8	+	6406	39	novel_in_catalog	PCM1	novel	6820	39	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	226586.73826508955	NA	0	NA	TRUE	NA	NA	NA	C	coding	2008	6027	287	6313	30.0	0	True	AATAAA	-23
PB.7911.9	chr3	-	3403	4	full-splice_match	OXTR	ENST00000316793.7	4364	4	134	827	130	-827	multi-exon	FALSE	canonical	1	62909	junction_2	28391.733425222363	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	492	1661	70.0	-1	True	NA	NA
PB.8617.9	chr3	-	5178	9	full-splice_match	PCYT1A	ENST00000431016.5	1482	9	93	-3789	0	-394	multi-exon	FALSE	canonical	1	259432	junction_7	101017.94275245116	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	149	1252	40.0	-75	True	ATTAAA	-15
PB.2424.2	chr12	-	1780	8	novel_in_catalog	MLF2	novel	1969	9	NA	NA	-35	0	intron_retention	FALSE	canonical	1	2108045	junction_7	410748.5935730577	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	243	989	50.0	-12	False	AATAAA	-10
PB.6632.12	chr2	+	3727	6	novel_in_catalog	CIAO1	novel	1533	7	NA	NA	0	-10	intron_retention	FALSE	canonical	1	504384	junction_1	150056.8468219961	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	111	815	15.0	4	True	NA	NA
PB.7911.4	chr3	-	4045	4	novel_not_in_catalog	OXTR	novel	4364	4	NA	NA	-94	-20	any annotated donor/acceptor	FALSE	canonical	1	1209	junction_3	51945.56368823895	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	327	1496	85.0	841	False	NA	NA
PB.7911.7	chr3	-	3251	4	novel_not_in_catalog	OXTR	novel	4364	4	NA	NA	-85	-801	any annotated donor/acceptor	FALSE	canonical	1	826	junction_3	52100.41708726204	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	314	1483	35.0	850	False	NA	NA
PB.6481.3	chr2	+	2250	20	incomplete-splice_match	PAPOLG	ENST00000238714.7	4263	22	31	4211	-5	748	3prime_fragment	FALSE	canonical	1	67713	junction_5	27328.42029920247	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2031	219	2249	75.0	-7	True	NA	NA
PB.6481.4	chr2	+	4227	22	full-splice_match	PAPOLG	ENST00000238714.7	4263	22	34	2	-2	-2	multi-exon	FALSE	canonical	1	67713	junction_5	28377.971027971664	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	216	2426	25.0	-4	True	AATAAA	-18
PB.6481.5	chr2	+	3667	21	novel_in_catalog	PAPOLG	novel	4263	22	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	4197	junction_19	35164.257379439994	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2145	216	2360	10.0	-4	True	TTTAAA	-5
PB.6481.6	chr2	+	3625	22	full-splice_match	PAPOLG	ENST00000238714.7	4263	22	38	600	2	-103	multi-exon	FALSE	canonical	1	67713	junction_5	28377.971027971664	NA	10	1	TRUE	NA	NA	NA	C	coding	736	2211	212	2422	25.0	0	True	ATTAAA	-24
PB.7911.2	chr3	-	4226	4	full-splice_match	OXTR	ENST00000316793.7	4364	4	118	20	114	-20	multi-exon	FALSE	canonical	1	62909	junction_2	28391.733425222363	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	508	1677	85.0	113	False	NA	NA
PB.10828.26	chr7	+	3252	8	full-splice_match	CALU	ENST00000479257.5	2572	8	-40	-640	1	0	multi-exon	FALSE	canonical	1	27271	junction_1	1073055.8650837203	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	872	1843	90.0	-7	True	NA	NA
PB.10907.7	chr7	-	5012	8	novel_in_catalog	PDIA4	novel	2903	10	NA	NA	-36	-381	intron_retention	FALSE	canonical	1	1112324	junction_7	563830.0666365239	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	97	1290	10.0	-37	True	NA	NA
PB.11081.3	chr8	+	4705	9	novel_in_catalog	MAK16	novel	3991	10	NA	NA	0	1	intron_retention	FALSE	canonical	1	149720	junction_1	58921.674736334295	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	1525	2073	40.0	0	True	AATAAA	-17
PB.7595.21	chr22	+	3980	2	full-splice_match	BCL2L13	ENST00000485631.1	1110	2	77	-2947	77	-5	multi-exon	FALSE	canonical	1	68939	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	280	897	20.0	6	True	AATAAA	-14
PB.7595.22	chr22	+	2601	2	full-splice_match	BCL2L13	ENST00000485631.1	1110	2	60	-1551	60	81	multi-exon	FALSE	canonical	1	68939	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	297	914	40.0	-122	False	AATAAA	-32
PB.7595.23	chr22	+	2893	2	full-splice_match	BCL2L13	ENST00000485631.1	1110	2	75	-1858	75	388	multi-exon	FALSE	canonical	1	68939	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	282	899	25.0	4	True	AATAAA	-20
PB.7595.24	chr22	+	2693	2	novel_not_in_catalog	BCL2L13	novel	4975	6	NA	NA	307	81	any annotated donor/acceptor	FALSE	canonical	1	622	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	C	coding	297	894	113	1006	40.0	125	False	AATAAA	-32
PB.6936.1	chr2	+	1269	7	incomplete-splice_match	SGO2	ENST00000357799.8	4214	9	-25	12290	-25	1350	3prime_fragment	FALSE	canonical	1	66305	junction_1	26291.358050486644	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1146	124	1269	80.0	-75	True	NA	NA
PB.2517.18	chr12	-	2070	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	-5	430	combination_of_known_junctions	FALSE	canonical	1	45479	junction_3	249307.41787048776	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	212	1771	65.0	4	True	ATTAAA	-11
PB.2517.19	chr12	-	2090	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	1	-442	combination_of_known_junctions	FALSE	canonical	1	26407	junction_10	243687.74265063065	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	416	1762	15.0	11	True	ATTAAA	-40
PB.5801.9	chr19	-	2809	23	full-splice_match	EPS15L1	ENST00000592031.5	2788	23	-42	21	0	-3	multi-exon	FALSE	canonical	1	16478	junction_19	106983.23084422048	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	336	2639	70.0	-1	True	AAGAAA	-12
PB.5801.8	chr19	-	2793	23	full-splice_match	EPS15L1	ENST00000248070.10	2924	23	113	18	-2	-2	multi-exon	FALSE	canonical	1	118877	junction_1	92468.62032875874	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	28	2622	65.0	-3	True	AAGAAA	-13
PB.2517.12	chr12	-	2626	12	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	2	-161	combination_of_known_junctions	FALSE	canonical	1	11171	junction_10	246518.39146430587	NA	4	1	TRUE	NA	NA	NA	C	coding	600	1803	215	2017	70.0	1	True	NA	NA
PB.2517.13	chr12	-	2510	12	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	0	-161	combination_of_known_junctions	FALSE	canonical	1	4266	junction_10	248172.53283492613	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	816	1901	70.0	-1	True	NA	NA
PB.2517.10	chr12	-	2262	9	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	12207	junction_8	344854.485824003	NA	53	NA	TRUE	NA	NA	NA	C	coding	312	939	184	1122	85.0	32	True	NA	NA
PB.5801.6	chr19	-	2658	22	full-splice_match	EPS15L1	ENST00000535753.6	2666	22	6	2	0	-2	multi-exon	FALSE	canonical	1	71080	junction_1	92890.54932431632	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	26	2290	65.0	-1	True	AAGAAA	-13
PB.5801.1	chr19	-	2889	22	novel_in_catalog	EPS15L1	novel	681	2	NA	NA	-9	-11	no_combination_of_known_junctions	FALSE	canonical	1	75452	junction_1	92424.02974359728	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	41	2434	45.0	-16	True	TATAAA	-39
PB.2517.17	chr12	-	2225	12	novel_not_in_catalog	TM7SF3	novel	2709	12	NA	NA	2	-442	any annotated donor/acceptor	FALSE	canonical	1	13826	junction_5	246712.74052586974	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	200	1897	15.0	16	True	ATTAAA	-40
PB.2517.14	chr12	-	2383	11	novel_in_catalog	TM7SF3	novel	2709	12	NA	NA	2	-161	combination_of_known_junctions	FALSE	canonical	1	45479	junction_3	249307.41787048776	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	215	1774	70.0	1	True	NA	NA
PB.2517.15	chr12	-	2434	12	full-splice_match	TM7SF3	ENST00000343028.8	2709	12	-16	291	-12	-291	multi-exon	FALSE	canonical	1	437409	junction_11	142248.31697381978	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	243	1955	60.0	-27	False	NA	NA
PB.7341.4	chr20	+	3104	24	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	-2	-366	no_combination_of_known_junctions	FALSE	canonical	1	1819	junction_12	349441.09594476904	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	126	1463	35.0	-29	True	ATTAAA	-16
PB.7341.5	chr20	+	3246	25	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	0	-366	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	455810.8713462817	NA	31	5	TRUE	NA	NA	NA	C	coding	845	2538	124	2661	35.0	-27	True	ATTAAA	-16
PB.7341.6	chr20	+	3655	25	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	5	-66	combination_of_known_junctions	FALSE	canonical	1	78727	junction_24	313860.0889441026	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	119	2956	25.0	-22	True	AGTAAA	-25
PB.7341.7	chr20	+	3218	26	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	3	-357	any annotated donor/acceptor	FALSE	canonical	1	30490	junction_25	381438.6010779842	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	121	2958	20.0	-24	True	ATTAAA	-25
PB.9261.1	chr5	-	2673	3	full-splice_match	CD180	ENST00000256447.5	5388	3	0	2715	0	2194	multi-exon	FALSE	canonical	1	58553	junction_2	8591.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	661	1986	159	2144	75.0	-23	True	TTTAAA	-3
PB.7341.1	chr20	+	3645	25	full-splice_match	CSE1L	ENST00000262982.2	3553	25	-9	-83	-9	75	multi-exon	FALSE	canonical	1	837841	junction_2	236555.9625102248	NA	2	NA	TRUE	NA	NA	NA	C	coding	971	2916	133	3048	35.0	-36	True	TATAAA	-40
PB.7341.3	chr20	+	3189	25	full-splice_match	CSE1L	ENST00000262982.2	3553	25	3	361	3	-361	multi-exon	FALSE	canonical	1	837841	junction_2	236555.9625102248	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	121	3036	25.0	-24	True	ATTAAA	-21
PB.6936.4	chr2	+	4245	10	novel_not_in_catalog	SGO2	novel	640	4	NA	NA	0	-22	any annotated donor/acceptor	FALSE	canonical	1	2593	junction_1	58769.17522113815	NA	4	NA	TRUE	NA	NA	NA	C	coding	1280	3843	107	3949	60.0	-50	True	NA	NA
PB.7341.8	chr20	+	3019	24	full-splice_match	CSE1L	ENST00000396192.7	3459	24	69	371	3	-363	multi-exon	FALSE	canonical	1	11752	junction_8	349147.95303657366	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	121	2868	25.0	-24	True	ATTAAA	-19
PB.7341.9	chr20	+	3241	26	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	5	-359	any annotated donor/acceptor	FALSE	canonical	1	5271	junction_25	384383.03442896955	NA	1	NA	TRUE	NA	NA	NA	C	coding	945	2838	119	2956	25.0	-22	True	ATTAAA	-23
PB.10345.9	chr6	+	3744	9	novel_not_in_catalog	FAM120B	novel	3721	11	NA	NA	-5	-12091	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	78239.24666996977	NA	0	NA	TRUE	NA	NA	NA	C	coding	891	2676	114	2789	10.0	-11	True	AATAAA	-19
PB.10345.8	chr6	+	3427	11	full-splice_match	FAM120B	ENST00000476287.3	5155	11	3	1725	1	-8	multi-exon	FALSE	canonical	1	121768	junction_1	48717.40444451038	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	106	2838	25.0	-3	True	NA	NA
PB.10345.7	chr6	+	4395	6	incomplete-splice_match	FAM120B	ENST00000476287.3	5155	11	-8	46751	-8	-44762	3prime_fragment	FALSE	canonical	1	121768	junction_1	55484.47292495442	NA	3	NA	TRUE	NA	NA	NA	C	coding	764	2295	117	2411	25.0	-14	True	TTTAAA	-4
PB.10345.6	chr6	+	3285	11	novel_not_in_catalog	FAM120B	novel	3721	11	NA	NA	-10	5	any annotated donor/acceptor	TRUE	canonical	1	6293	junction_6	78315.07129767552	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	119	2413	35.0	-16	True	NA	NA
PB.10345.5	chr6	+	5165	11	full-splice_match	FAM120B	ENST00000476287.3	5155	11	-10	0	-10	0	multi-exon	FALSE	canonical	1	121768	junction_1	48717.40444451038	NA	2	NA	TRUE	NA	NA	NA	C	coding	910	2733	119	2851	30.0	-16	True	AATAAA	-27
PB.10345.4	chr6	+	2915	5	novel_in_catalog	FAM120B	novel	3721	11	NA	NA	-19	-46080	no_combination_of_known_junctions	FALSE	canonical	1	11360	junction_4	99770.02734883608	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	128	2257	15.0	-25	True	NA	NA
PB.10345.3	chr6	+	4904	11	full-splice_match	FAM120B	ENST00000476287.3	5155	11	-5	256	-5	-256	multi-exon	FALSE	canonical	1	121768	junction_1	48717.40444451038	NA	3	NA	TRUE	NA	NA	NA	C	coding	910	2733	114	2846	25.0	-11	True	AATAAA	-19
PB.10345.2	chr6	+	3081	11	full-splice_match	FAM120B	ENST00000476287.3	5155	11	6	2068	4	-79	multi-exon	FALSE	canonical	1	121768	junction_1	48717.40444451038	NA	1	NA	TRUE	NA	NA	NA	C	coding	910	2733	103	2835	15.0	0	True	NA	NA
PB.10345.1	chr6	+	3073	6	incomplete-splice_match	FAM120B	ENST00000476287.3	5155	11	-5	48070	-5	-46081	3prime_fragment	FALSE	canonical	1	121768	junction_1	55484.47292495442	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	114	2408	15.0	-11	True	NA	NA
PB.1305.3	chr10	-	3244	4	full-splice_match	FAM107B	ENST00000468747.5	2633	4	-12	-599	-12	0	multi-exon	FALSE	canonical	1	117511	junction_3	413170.56641080114	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	219	614	20.0	-1	True	AATAAA	-24
PB.1305.1	chr10	-	3248	5	full-splice_match	FAM107B	ENST00000378467.8	2374	5	80	-954	-43	0	multi-exon	FALSE	canonical	1	48842	junction_4	447333.71723161	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	222	617	20.0	1061	False	AATAAA	-25
PB.333.5	chr1	+	1939	18	incomplete-splice_match	CTPS1	ENST00000650070.1	2838	19	1	2301	1	673	3prime_fragment	FALSE	canonical	1	320551	junction_1	142900.29394414063	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	147	1922	25.0	1	True	AATAAA	-28
PB.1305.5	chr10	-	2544	4	full-splice_match	FAM107B	ENST00000468747.5	2633	4	77	12	-17	-12	multi-exon	FALSE	canonical	1	117511	junction_3	413170.56641080114	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	130	525	70.0	1087	False	NA	NA
PB.10046.7	chr6	-	2692	8	novel_not_in_catalog	RAB23	novel	4837	7	NA	NA	7	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	94760.45587906467	NA	1	NA	TRUE	NA	NA	NA	B	coding	237	714	327	1040	85.0	121	False	AGTAAA	-25
PB.10046.6	chr6	-	2718	7	novel_not_in_catalog	RAB23	novel	4837	7	NA	NA	5	-26	any annotated donor/acceptor	FALSE	canonical	1	7708	junction_6	92321.88158948139	NA	0	NA	TRUE	NA	NA	NA	B	coding	237	714	353	1066	85.0	119	False	AGTAAA	-25
PB.10046.5	chr6	-	2925	6	novel_in_catalog	RAB23	novel	4837	7	NA	NA	9	-26	no_combination_of_known_junctions	FALSE	canonical	1	4268	junction_4	108951.50658894076	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	123	False	AGTAAA	-25
PB.10046.3	chr6	-	4773	7	novel_not_in_catalog	RAB23	novel	4837	7	NA	NA	16	-4	any annotated donor/acceptor	FALSE	canonical	1	3391	junction_6	93786.76667742393	NA	3	NA	TRUE	NA	NA	NA	B	coding	237	714	595	1308	35.0	130	False	AATAAA	-15
PB.10046.1	chr6	-	4467	7	novel_not_in_catalog	RAB23	novel	4837	7	NA	NA	7	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	94940.70128594304	NA	5	1	TRUE	NA	NA	NA	B	coding	237	714	288	1001	30.0	121	False	AATAAA	-16
PB.8712.5	chr4	+	2779	18	incomplete-splice_match	NCAPG	ENST00000251496.6	4661	21	80	4737	-40	2964	3prime_fragment	FALSE	canonical	1	167764	junction_4	83670.7045882702	NA	1	1	TRUE	NA	NA	NA	C	coding	894	2682	97	2778	65.0	-10	True	NA	NA
PB.780.62	chr1	-	2412	3	full-splice_match	ADAR	ENST00000494866.1	471	3	-39	-1902	17	1	multi-exon	FALSE	canonical	1	95616	junction_1	83247.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	832	1551	85.0	16	True	NA	NA
PB.10132.1	chr6	+	4209	2	incomplete-splice_match	PRDM1	ENST00000369096.8	5164	7	-3	17808	-3	-3490	3prime_fragment	FALSE	canonical	1	82479	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	118	357	238	594	95.0	-1685	False	NA	NA
PB.8070.2	chr3	-	3278	9	novel_in_catalog	LZTFL1	novel	4073	10	NA	NA	-7	-673	combination_of_known_junctions	FALSE	canonical	1	15099	junction_1	85288.0890217642	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	162	944	30.0	-34	False	AATAAA	-13
PB.8070.3	chr3	-	3246	9	full-splice_match	LZTFL1	ENST00000411866.5	986	9	-13	-2247	3	-674	multi-exon	FALSE	canonical	1	10109	junction_8	76770.34397545301	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-24	True	AATAAA	-12
PB.8070.1	chr3	-	3349	10	full-splice_match	LZTFL1	ENST00000296135.10	4073	10	47	677	-3	-673	multi-exon	FALSE	canonical	1	100276	junction_9	52997.13769163551	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	129	1028	30.0	-1	True	AATAAA	-13
PB.8070.4	chr3	-	3305	10	full-splice_match	LZTFL1	ENST00000296135.10	4073	10	23	745	2	-741	multi-exon	FALSE	canonical	1	100276	junction_9	52997.13769163551	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	153	1052	15.0	-25	True	AATAAA	-25
PB.8070.5	chr3	-	1522	10	full-splice_match	LZTFL1	ENST00000296135.10	4073	10	15	2536	-6	114	multi-exon	FALSE	canonical	1	100276	junction_9	52997.13769163551	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	161	1060	55.0	-33	False	AATAAA	-18
PB.11817.6	chr9	-	2517	14	novel_not_in_catalog	CIZ1	novel	717	5	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_13	329456.6882727814	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	194	2386	20.0	1346	False	AATAAA	-21
PB.319.2	chr1	-	2214	8	full-splice_match	PPT1	ENST00000439754.6	2195	8	0	-19	0	0	multi-exon	FALSE	canonical	1	64358	junction_1	450509.27899352455	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	15	863	10.0	-1	True	AATAAA	-16
PB.11817.4	chr9	-	2766	18	novel_in_catalog	CIZ1	novel	717	5	NA	NA	18	0	intron_retention	TRUE	canonical	1	123977	junction_10	320313.975087874	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	107	2635	20.0	1415	False	AATAAA	-21
PB.11817.5	chr9	-	2762	18	novel_in_catalog	CIZ1	novel	717	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	70020	junction_3	358262.8545843503	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	127	2631	20.0	19	True	AATAAA	-21
PB.201.1	chr1	+	2058	4	novel_in_catalog	PIGV	novel	608	3	NA	NA	-36	-92	intron_retention	FALSE	canonical	1	20582	junction_1	60667.58578241487	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	120	1601	15.0	-24	True	AATAAA	-25
PB.11817.3	chr9	-	2932	17	novel_not_in_catalog	CIZ1	novel	717	5	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_16	364290.50438947737	NA	5	1	TRUE	NA	NA	NA	C	coding	890	2673	129	2801	20.0	13	True	AATAAA	-21
PB.201.3	chr1	+	2638	4	full-splice_match	PIGV	ENST00000374145.5	2713	4	-18	93	-18	-93	multi-exon	FALSE	canonical	1	7039	junction_1	67051.5531131747	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	701	2182	15.0	-11	True	AATAAA	-24
PB.201.2	chr1	+	2315	4	full-splice_match	PIGV	ENST00000078527.8	2367	4	-45	97	-14	-92	multi-exon	FALSE	canonical	1	45020	junction_1	49148.052257100346	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	377	1858	15.0	-2	True	AATAAA	-25
PB.9108.1	chr4	+	1804	8	novel_not_in_catalog	LINC01060	novel	716	5	NA	NA	8167	535	any annotated donor/acceptor	FALSE	canonical	1	188	junction_1	3187.520967518072	NA	0	NA	TRUE	NA	NA	NA	B	coding	105	318	200	517	80.0	8096	False	NA	NA
PB.9052.2	chr4	-	2699	3	novel_not_in_catalog	TRIM61	novel	1582	5	NA	NA	34	-13837	any annotated donor/acceptor	FALSE	canonical	1	4036	junction_2	29136.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	471	1416	980	2395	20.0	-4	True	AATAAA	-21
PB.11817.8	chr9	-	2814	16	novel_in_catalog	CIZ1	novel	717	5	NA	NA	-12	0	intron_retention	FALSE	canonical	1	23207	junction_15	379823.73948199826	NA	1	NA	TRUE	NA	NA	NA	C	coding	874	2625	64	2688	20.0	-2	True	AATAAA	-16
PB.1044.1	chr1	-	1635	9	full-splice_match	CYB5R1	ENST00000367249.8	1651	9	9	7	4	0	multi-exon	FALSE	canonical	1	637696	junction_8	104442.63505082288	NA	0	NA	TRUE	NA	NA	NA	A	coding	305	918	67	984	15.0	0	True	AATAAA	-28
PB.850.11	chr1	-	1877	7	full-splice_match	PEX19	ENST00000472750.5	3504	7	13	1614	0	815	multi-exon	FALSE	canonical	1	111009	junction_6	219929.61330136715	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	178	807	10.0	-9	True	AATAAA	-15
PB.850.10	chr1	-	1982	8	full-splice_match	PEX19	ENST00000368072.9	3661	8	10	1669	-3	815	multi-exon	FALSE	canonical	1	459830	junction_6	108256.63218840456	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	13	912	10.0	-4	True	AATAAA	-15
PB.8346.17	chr3	-	2783	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	182331.31531817108	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	244	1947	40.0	0	True	AATAAA	-16
PB.1653.2	chr10	+	2716	9	full-splice_match	SHOC2	ENST00000369452.8	3943	9	-7	1234	-7	763	multi-exon	FALSE	canonical	1	267224	junction_1	75955.89050560858	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	353	2101	65.0	-66	False	NA	NA
PB.1653.3	chr10	+	3803	8	novel_in_catalog	SHOC2	novel	3943	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	6647	junction_2	148927.86560408282	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	345	1955	5.0	-58	False	TATAAA	-30
PB.1653.1	chr10	+	3837	8	novel_in_catalog	SHOC2	novel	3943	9	NA	NA	-13	0	no_combination_of_known_junctions	TRUE	canonical	1	2290	junction_7	125084.36894629912	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	359	1798	5.0	-72	False	TATAAA	-30
PB.1653.6	chr10	+	3885	9	full-splice_match	SHOC2	ENST00000369452.8	3943	9	55	3	-1	0	multi-exon	FALSE	canonical	1	267224	junction_1	75955.89050560858	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	291	2039	10.0	-4	True	TATAAA	-28
PB.1653.7	chr10	+	4157	9	full-splice_match	SHOC2	ENST00000369452.8	3943	9	55	-269	-1	269	multi-exon	FALSE	canonical	1	267224	junction_1	75955.89050560858	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	291	2039	35.0	-4	True	TATAAA	-15
PB.1653.4	chr10	+	2979	8	novel_in_catalog	SHOC2	novel	3943	9	NA	NA	-20	0	no_combination_of_known_junctions	FALSE	canonical	1	19903	junction_1	146607.97973354324	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	466	1131	5.0	-7	True	TATAAA	-30
PB.1653.5	chr10	+	4091	10	novel_in_catalog	SHOC2	novel	3943	9	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	1	4233	junction_2	168210.45635354143	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	498	2246	10.0	0	True	TATAAA	-27
PB.10660.1	chr7	+	1796	1	antisense	novelGene_MTERF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	AGTAAA	-3
PB.7767.5	chr22	-	2082	3	novel_not_in_catalog	SOX10	novel	1095	4	NA	NA	-8	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	47001.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	244	735	166	900	15.0	-3	True	AATAAA	-17
PB.7767.6	chr22	-	2754	4	novel_not_in_catalog	SOX10	novel	1095	4	NA	NA	-19	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	58445.865963489865	NA	6	1	TRUE	NA	NA	NA	B	coding	377	1134	440	1573	15.0	-14	True	AATAAA	-16
PB.8712.9	chr4	+	3221	21	full-splice_match	NCAPG	ENST00000251496.6	4661	21	86	1354	-34	60	multi-exon	FALSE	canonical	1	167764	junction_4	128153.98838740838	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	91	3138	30.0	-4	True	AATAAA	-27
PB.11149.3	chr8	+	3782	8	full-splice_match	RAB2A	ENST00000262646.11	3848	8	81	-15	2	15	multi-exon	FALSE	canonical	1	886578	junction_3	286603.831760776	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	271	909	25.0	2	True	AATAAA	-32
PB.6975.1	chr2	+	3714	10	full-splice_match	CCNYL1	ENST00000295414.7	3767	10	49	4	-16	-4	multi-exon	FALSE	canonical	1	25874	junction_6	16940.849611384772	NA	1	NA	TRUE	NA	NA	NA	A	coding	359	1080	163	1242	30.0	95	False	AATAAA	-14
PB.4719.1	chr17	+	603	3	full-splice_match	RNASEK	ENST00000593646.5	566	3	11	-48	0	0	multi-exon	FALSE	canonical	1	2999213	junction_1	1141288.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	98	297	63	359	5.0	-15	True	AATAAA	-17
PB.2393.6	chr12	+	2220	15	novel_in_catalog	ITFG2	novel	2361	12	NA	NA	-2	3	no_combination_of_known_junctions	FALSE	canonical	1	334	junction_12	82226.67671300663	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	83	1426	25.0	2	True	ATTAAA	-17
PB.2393.7	chr12	+	2370	12	novel_in_catalog	ITFG2	novel	2361	12	NA	NA	1	3	intron_retention	FALSE	canonical	1	83155	junction_11	53186.309571803984	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	76	1392	20.0	9	True	NA	NA
PB.2393.4	chr12	+	1936	12	full-splice_match	ITFG2	ENST00000228799.6	2361	12	30	395	-29	4	multi-exon	FALSE	canonical	1	88584	junction_5	43504.3646551652	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	110	1453	25.0	-25	True	NA	NA
PB.2393.5	chr12	+	2252	12	novel_in_catalog	ITFG2	novel	2361	12	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	83155	junction_11	53186.309571803984	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	93	1409	10.0	-8	True	NA	NA
PB.2393.2	chr12	+	2298	12	full-splice_match	ITFG2	ENST00000228799.6	2361	12	47	16	-12	-16	multi-exon	FALSE	canonical	1	88584	junction_5	43504.3646551652	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	93	1436	60.0	-8	True	NA	NA
PB.2393.3	chr12	+	3468	12	full-splice_match	ITFG2	ENST00000228799.6	2361	12	26	-1133	26	1133	multi-exon	FALSE	canonical	1	88584	junction_5	43504.3646551652	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	114	1457	75.0	-29	True	AAAAAG	-30
PB.11472.3	chr9	-	5951	17	full-splice_match	HAUS6	ENST00000380502.7	6536	17	203	382	203	-382	multi-exon	FALSE	canonical	1	52	junction_7	73423.27835908782	NA	14	1	TRUE	NA	NA	NA	C	coding	911	2736	398	3133	35.0	-13	True	AATAAA	-14
PB.2393.1	chr12	+	2221	12	full-splice_match	ITFG2	ENST00000228799.6	2361	12	15	125	15	5	multi-exon	FALSE	canonical	1	88584	junction_5	43504.3646551652	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	125	1468	10.0	-40	False	NA	NA
PB.11472.9	chr9	-	3697	17	novel_not_in_catalog	HAUS6	novel	6536	17	NA	NA	218	916	any annotated donor/acceptor	FALSE	canonical	1	52	junction_7	69096.90456751663	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	597	3056	70.0	2	True	AATAAA	-42
PB.11472.8	chr9	-	3779	17	full-splice_match	HAUS6	ENST00000380502.7	6536	17	198	2559	198	916	multi-exon	FALSE	canonical	1	52	junction_7	73423.27835908782	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	403	3138	70.0	-18	True	AATAAA	-42
PB.586.5	chr1	-	4570	13	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	1	-92280	intron_retention	FALSE	canonical	1	715	junction_12	109441.40800532265	NA	17	NA	TRUE	NA	NA	NA	B	coding	551	1656	308	1963	15.0	-31	True	AATAAA	-12
PB.506.12	chr1	-	2793	11	full-splice_match	MCOLN3	ENST00000490600.6	2777	11	-21	5	-21	-5	multi-exon	FALSE	canonical	1	5161	junction_6	14689.187545946848	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	787	1464	85.0	-52	False	NA	NA
PB.586.7	chr1	-	4484	13	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	35	-92280	intron_retention	FALSE	canonical	1	2969	junction_12	109040.09555392788	NA	2	NA	TRUE	NA	NA	NA	B	coding	551	1656	222	1877	15.0	3	True	AATAAA	-12
PB.586.6	chr1	-	4538	13	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	1	-92280	intron_retention	FALSE	canonical	1	4234	junction_12	108815.78327154568	NA	2	NA	TRUE	NA	NA	NA	B	coding	551	1656	276	1931	15.0	-31	True	AATAAA	-12
PB.586.1	chr1	-	4390	12	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	-4	-92272	intron_retention	TRUE	canonical	1	3614	junction_11	100537.15963153554	NA	0	NA	TRUE	NA	NA	NA	B	coding	586	1761	15	1775	15.0	-36	True	AATAAA	-20
PB.586.3	chr1	-	4412	12	full-splice_match	CLCC1	ENST00000356970.6	4803	12	-40	431	-40	0	multi-exon	FALSE	canonical	1	65789	junction_11	87369.01373480036	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	149	1804	15.0	-45	True	AATAAA	-13
PB.586.2	chr1	-	4568	13	novel_in_catalog	AL449266.1	novel	557	6	NA	NA	-4	-92275	intron_retention	FALSE	canonical	1	54929	junction_12	100417.68622480333	NA	1	NA	TRUE	NA	NA	NA	B	coding	551	1656	301	1956	5.0	-36	True	AATAAA	-17
PB.5219.4	chr17	-	2497	8	novel_not_in_catalog	SLC39A11	novel	2737	10	NA	NA	7	-11293	any annotated donor/acceptor	FALSE	canonical	1	5372	junction_1	57758.55081143167	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	105	974	80.0	-16	True	NA	NA
PB.5219.5	chr17	-	4381	8	novel_not_in_catalog	SLC39A11	novel	2737	10	NA	NA	0	-12561	any annotated donor/acceptor	FALSE	canonical	1	940	junction_1	59220.77699522666	NA	2	NA	TRUE	NA	NA	NA	C	coding	239	720	90	809	10.0	-1	True	TATAAA	-10
PB.5219.6	chr17	-	1855	7	novel_in_catalog	SLC39A11	novel	2737	10	NA	NA	-3	861	combination_of_known_junctions	FALSE	canonical	1	4838	junction_1	60108.2390879154	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	117	839	85.0	7035	False	NA	NA
PB.10907.9	chr7	-	2257	11	novel_not_in_catalog	PDIA4	novel	2903	10	NA	NA	-36	-382	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	1065757.2761931724	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	97	1140	10.0	-37	True	NA	NA
PB.586.9	chr1	-	2742	13	novel_in_catalog	AL449266.1	novel	557	6	NA	NA	-15	-94112	no_combination_of_known_junctions	FALSE	canonical	1	54929	junction_12	100417.68622480333	NA	1	NA	TRUE	NA	NA	NA	B	coding	551	1656	312	1967	30.0	-47	True	AATACA	-41
PB.5219.1	chr17	-	3253	11	novel_not_in_catalog	SLC39A11	novel	2737	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	15	junction_3	77729.76276459359	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	194	712	20.0	11	True	AATAAA	-16
PB.5219.2	chr17	-	2752	10	full-splice_match	SLC39A11	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	1	58416	junction_5	35641.02591254586	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	90	1118	20.0	-1	True	AATAAA	-16
PB.5219.3	chr17	-	2742	10	full-splice_match	SLC39A11	ENST00000255559.7	2737	10	-6	1	-6	0	multi-exon	FALSE	canonical	1	128440	junction_5	19615.14815482673	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	101	1108	20.0	-12	True	AATAAA	-16
PB.8625.2	chr3	-	1411	3	full-splice_match	CEP19	ENST00000409690.3	2201	3	17	773	17	11	multi-exon	FALSE	canonical	1	41607	junction_2	16139.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	407	910	100.0	-29	True	NA	NA
PB.8113.8	chr3	-	1368	5	full-splice_match	RHOA	ENST00000418115.5	2031	5	198	465	-34	282	multi-exon	FALSE	canonical	1	5048759	junction_4	1265595.674563563	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	188	769	25.0	-32	True	AATAAA	-18
PB.8113.2	chr3	-	1796	4	full-splice_match	RHOA	ENST00000454011.6	889	4	-164	-743	5	-4	multi-exon	FALSE	canonical	1	30953	junction_2	3446085.7292312905	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	AATAAA	-11
PB.8113.3	chr3	-	1923	5	full-splice_match	RHOA	ENST00000418115.5	2031	5	105	3	0	-3	multi-exon	FALSE	canonical	1	5048759	junction_4	1265595.674563563	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	281	862	20.0	-4	True	AATAAA	-12
PB.11448.4	chr9	-	4493	1	full-splice_match	RANBP6	ENST00000259569.5	4576	1	-21	104	-14	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	1105	3318	33	3350	55.0	-25	False	NA	NA
PB.8113.1	chr3	-	1961	6	full-splice_match	RHOA	ENST00000422781.5	961	6	-15	-985	-15	8	multi-exon	FALSE	canonical	1	33475	junction_2	3331326.06334501	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	169	732	5.0	-13	True	AATAAA	-23
PB.8113.6	chr3	-	1460	5	full-splice_match	RHOA	ENST00000418115.5	2031	5	226	345	-6	-345	multi-exon	FALSE	canonical	1	5048759	junction_4	1265595.674563563	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	160	741	20.0	-4	True	AATAAA	-24
PB.8113.7	chr3	-	1589	6	full-splice_match	RHOA	ENST00000422781.5	961	6	-3	-625	-3	-352	multi-exon	FALSE	canonical	1	33475	junction_2	3331326.06334501	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	157	720	20.0	-1	True	AATAAA	-17
PB.8113.4	chr3	-	3407	5	novel_in_catalog	RHOA	novel	2031	5	NA	NA	-42	-2	intron_retention	FALSE	canonical	1	48248	junction_1	3003200.7626769957	NA	13	NA	TRUE	NA	NA	NA	C	coding	137	414	196	609	15.0	-40	True	AATAAA	-13
PB.11448.1	chr9	-	4053	1	full-splice_match	RANBP6	ENST00000259569.5	4576	1	522	1	516	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	805	2418	390	2807	10.0	518	False	NA	NA
PB.6904.1	chr2	+	1823	6	full-splice_match	INPP1	ENST00000322522.8	1919	6	15	81	15	-80	multi-exon	FALSE	canonical	1	92387	junction_1	64825.874159628576	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	442	1641	30.0	-4	True	AATAAA	-19
PB.6904.2	chr2	+	1957	7	full-splice_match	INPP1	ENST00000392329.6	2162	7	126	79	26	-79	multi-exon	FALSE	canonical	1	15965	junction_1	99081.22324428243	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	575	1774	30.0	7	True	AATAAA	-20
PB.11920.2	chr9	-	2889	12	novel_in_catalog	ANAPC2	novel	1972	3	NA	NA	-10	0	intron_retention	FALSE	canonical	1	185828	junction_10	98960.5596790964	NA	3	NA	TRUE	NA	NA	NA	C	coding	679	2040	28	2067	0.0	0	True	ATTAAA	-16
PB.333.4	chr1	+	2029	17	full-splice_match	CTPS1	ENST00000480420.6	2019	17	9	-19	1	-6	multi-exon	FALSE	canonical	1	51468	junction_13	195081.6966825914	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	147	1502	35.0	1	True	TTTAAA	-34
PB.6374.1	chr2	-	2198	2	full-splice_match	MPV17	ENST00000494436.1	590	2	-3	-1605	1	1605	multi-exon	FALSE	canonical	1	360296	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	103	312	1011	1322	85.0	16	True	NA	NA
PB.11920.4	chr9	-	2662	13	full-splice_match	ANAPC2	ENST00000323927.2	2632	13	-30	0	-18	0	multi-exon	FALSE	canonical	1	185828	junction_11	95196.48439353675	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	36	2504	0.0	-8	True	ATTAAA	-16
PB.766.9	chr1	+	3499	23	novel_in_catalog	INTS3	novel	5235	30	NA	NA	-34	44	intron_retention	FALSE	canonical	1	369917	junction_13	113391.6832026902	NA	1	1	TRUE	NA	NA	NA	C	coding	555	1668	1523	3190	15.0	7938	False	NA	NA
PB.766.8	chr1	+	3317	24	incomplete-splice_match	INTS3	ENST00000435409.6	3597	31	23041	-544	-3	0	5prime_fragment	FALSE	canonical	1	369917	junction_14	116876.27546179893	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	112	2508	5.0	7969	False	AATAAA	-16
PB.10357.4	chr7	+	2328	2	full-splice_match	GPR146	ENST00000481403.1	534	2	-8	-1786	-8	1786	multi-exon	FALSE	canonical	1	8478	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-16
PB.10357.2	chr7	+	1848	2	full-splice_match	GPR146	ENST00000444847.1	1053	2	-30	-765	-30	-35	multi-exon	FALSE	canonical	1	11195	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	138	1139	70.0	0	True	NA	NA
PB.10357.3	chr7	+	3568	1	genic	GPR146	novel	NA	NA	NA	NA	-21	2306	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	3	335	20.0	9	True	NA	NA
PB.10357.1	chr7	+	2900	2	full-splice_match	GPR146	ENST00000481403.1	534	2	-59	-2307	-30	2307	multi-exon	FALSE	canonical	1	8478	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.1541.16	chr10	-	3145	23	novel_in_catalog	IDE	novel	4480	15	NA	NA	-2	-8	no_combination_of_known_junctions	FALSE	canonical	1	7185	junction_1	71432.15076571984	NA	1	NA	TRUE	NA	NA	NA	C	coding	972	2919	60	2978	50.0	-10	True	AGTAAA	-5
PB.1541.17	chr10	-	3235	25	full-splice_match	IDE	ENST00000265986.10	5877	25	-13	2655	-13	-70	multi-exon	FALSE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	71	3130	65.0	-21	True	AAGAAA	-43
PB.1541.14	chr10	-	3800	25	full-splice_match	IDE	ENST00000265986.10	5877	25	-17	2094	-17	491	multi-exon	FALSE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	75	3134	25.0	-25	True	AATACA	-33
PB.1541.15	chr10	-	3306	25	full-splice_match	IDE	ENST00000265986.10	5877	25	-7	2578	-7	7	multi-exon	FALSE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	65	3124	45.0	-15	True	AGTAAA	-20
PB.1541.12	chr10	-	4884	25	full-splice_match	IDE	ENST00000265986.10	5877	25	-12	1005	-12	-1005	multi-exon	FALSE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	70	3129	35.0	-20	True	AATAAA	-23
PB.1541.13	chr10	-	4380	25	full-splice_match	IDE	ENST00000265986.10	5877	25	-17	1514	-17	1071	multi-exon	FALSE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	75	3134	40.0	-25	True	ATTAAA	-15
PB.1541.10	chr10	-	5035	24	novel_in_catalog	IDE	novel	4480	15	NA	NA	-4	-564	no_combination_of_known_junctions	FALSE	canonical	1	7253	junction_4	76128.1920840922	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	53	2839	15.0	-3	True	AATAAA	-14
PB.766.6	chr1	+	4166	31	full-splice_match	INTS3	ENST00000435409.6	3597	31	-25	-544	-1	0	multi-exon	FALSE	canonical	1	6554	junction_1	160361.8772088408	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	229	3357	5.0	16	True	AATAAA	-16
PB.2902.2	chr12	-	1604	8	full-splice_match	HVCN1	ENST00000242607.12	1634	8	29	1	29	-1	multi-exon	FALSE	canonical	1	90593	junction_7	139709.38055295285	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	153	974	15.0	-14	True	AATAAA	-39
PB.2902.3	chr12	-	1344	8	full-splice_match	HVCN1	ENST00000242607.12	1634	8	29	261	29	93	multi-exon	FALSE	canonical	1	90593	junction_7	139709.38055295285	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	153	974	70.0	-14	True	NA	NA
PB.8097.3	chr3	-	1538	2	novel_not_in_catalog	PRKAR2A	novel	448	3	NA	NA	2	-799	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	1	True	NA	NA
PB.11929.11	chr9	-	2300	10	novel_in_catalog	DPH7	novel	1311	2	NA	NA	-12	0	intron_retention	FALSE	canonical	1	48414	junction_6	101842.09113895666	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	1140	1970	55.0	-21	True	ATTAAA	-13
PB.6932.5	chr2	-	2143	8	full-splice_match	TYW5	ENST00000354611.8	4306	8	244	1919	8	5	multi-exon	FALSE	canonical	1	33835	junction_6	28066.521347160433	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	23	970	15.0	-2	True	AATAAA	-33
PB.6932.4	chr2	-	2182	8	full-splice_match	TYW5	ENST00000483328.5	4287	8	188	1917	-45	7	multi-exon	FALSE	canonical	1	71912	junction_6	19142.568315518314	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	549	1007	15.0	-58	False	AATAAA	-35
PB.6932.3	chr2	-	2711	8	full-splice_match	TYW5	ENST00000354611.8	4306	8	236	1359	0	-1	multi-exon	FALSE	canonical	1	33835	junction_6	28066.521347160433	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	31	978	35.0	-10	True	AATAAA	-22
PB.6932.2	chr2	-	4033	8	full-splice_match	TYW5	ENST00000483328.5	4287	8	234	20	0	-20	multi-exon	FALSE	canonical	1	71912	junction_6	19142.568315518314	NA	4	NA	TRUE	NA	NA	NA	C	coding	152	459	503	961	95.0	-12	True	NA	NA
PB.6932.1	chr2	-	4067	8	full-splice_match	TYW5	ENST00000354611.8	4306	8	220	19	-13	-19	multi-exon	TRUE	canonical	1	33835	junction_6	28066.521347160433	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	47	994	100.0	-26	True	NA	NA
PB.544.2	chr1	-	2638	9	novel_in_catalog	CCDC18-AS1	novel	770	7	NA	NA	1	-4	intron_retention	FALSE	canonical	1	30705	junction_2	59655.74046233418	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-13	True	NA	NA
PB.1650.15	chr10	+	2129	11	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-1	31	combination_of_known_junctions	FALSE	canonical	1	18722	junction_1	363514.79579620966	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	617	1468	25.0	-10	True	AATAAA	-26
PB.2925.2	chr12	-	3520	16	incomplete-splice_match	SLC8B1	ENST00000552014.5	3289	17	-115	38	-2	-16	intron_retention	FALSE	non_canonical	0	0	junction_11	44446.038071151204	NA	0	NA	TRUE	NA	NA	NA	B	coding	584	1755	786	2540	80.0	-39	True	AAGAAA	-24
PB.2925.1	chr12	-	3709	15	novel_not_in_catalog	SLC8B1	novel	3289	17	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_2	56815.89670746621	NA	2	NA	TRUE	NA	NA	NA	B	coding	381	1146	1529	2674	50.0	-45	False	AATAAA	-18
PB.8507.2	chr3	-	1256	8	full-splice_match	PDCD10	ENST00000497056.6	1276	8	38	-18	0	16	multi-exon	FALSE	canonical	1	646643	junction_7	140545.53947023573	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	210	842	55.0	-1	True	AATAAA	-31
PB.1650.11	chr10	+	3367	13	full-splice_match	PDCD4	ENST00000393104.6	3697	13	118	212	-6	-212	multi-exon	FALSE	canonical	1	28695	junction_3	450406.8245803824	NA	8	NA	TRUE	NA	NA	NA	C	coding	458	1377	286	1662	75.0	-15	True	NA	NA
PB.1650.10	chr10	+	2687	13	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-9	434	no_combination_of_known_junctions	FALSE	canonical	1	3970	junction_3	454522.31929896434	NA	2	NA	TRUE	NA	NA	NA	C	coding	283	852	772	1623	35.0	-18	True	AATAAA	-24
PB.1650.13	chr10	+	2600	12	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-6	434	combination_of_known_junctions	FALSE	canonical	1	74591	junction_2	370427.07931655284	NA	2	NA	TRUE	NA	NA	NA	C	coding	455	1368	169	1536	35.0	-15	True	AATAAA	-24
PB.6862.7	chr2	+	2822	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	178	-933	-8	933	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	60	1196	10.0	-53	False	AATAAA	-35
PB.1650.19	chr10	+	4209	2	novel_not_in_catalog	PDCD4	novel	3697	13	NA	NA	5	-5687	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	109	330	3	332	90.0	-4	True	NA	NA
PB.1650.18	chr10	+	2304	13	full-splice_match	PDCD4	ENST00000393104.6	3697	13	126	1267	2	20	multi-exon	FALSE	canonical	1	28695	junction_3	450406.8245803824	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	278	1654	20.0	-7	True	AATAAA	-15
PB.11068.21	chr8	-	5874	1	genic	DUSP4	novel	NA	NA	NA	NA	-53	-8309	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	221	666	453	1118	85.0	1	True	NA	NA
PB.11068.20	chr8	-	3384	3	novel_in_catalog	DUSP4	novel	5537	4	NA	NA	-14	-288	intron_retention	FALSE	canonical	1	404631	junction_2	34852.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	2238	3185	40.0	-1	True	AATAAA	-18
PB.3853.6	chr15	-	4661	26	incomplete-splice_match	CEP152	ENST00000380950.6	5635	27	73	3213	8	-642	3prime_fragment	FALSE	canonical	1	53131	junction_4	16447.743837985803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1368	4107	116	4222	85.0	0	True	NA	NA
PB.3853.7	chr15	-	3944	24	incomplete-splice_match	CEP152	ENST00000380950.6	5635	27	65	6319	0	-3748	3prime_fragment	FALSE	canonical	1	53131	junction_2	17057.073238820314	NA	0	NA	TRUE	NA	NA	NA	C	coding	1273	3819	124	3942	65.0	-8	True	ATTAAA	-6
PB.3853.4	chr15	-	5670	28	novel_not_in_catalog	CEP152	novel	577	4	NA	NA	8	-5	any annotated donor/acceptor	FALSE	canonical	1	1841	junction_1	30356.753724432907	NA	2	1	TRUE	NA	NA	NA	C	coding	721	2166	2193	4358	35.0	0	True	AATAAA	-16
PB.3853.5	chr15	-	4254	27	full-splice_match	CEP152	ENST00000380950.6	5635	27	62	1319	0	-1103	multi-exon	FALSE	canonical	1	34757	junction_1	18864.525472674144	NA	0	NA	TRUE	NA	NA	NA	C	coding	1376	4128	127	4254	75.0	-11	True	NA	NA
PB.7804.29	chr22	+	2835	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5621	19646	intron_retention	FALSE	canonical	1	12110	junction_6	148033.91629525955	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	149	1996	10.0	46	True	AATAAA	-22
PB.7804.28	chr22	+	2986	19	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5607	19638	intron_retention	FALSE	canonical	1	118069	junction_2	141037.24748572192	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	281	2155	30.0	32	True	AATAAA	-14
PB.2247.1	chr11	-	3298	5	full-splice_match	TMEM123	ENST00000398136.6	3579	5	279	2	74	-2	multi-exon	FALSE	canonical	1	1666312	junction_4	306838.93885473534	NA	14	1	TRUE	NA	NA	NA	C	coding	208	627	143	769	30.0	-1	True	AATAAA	-13
PB.7681.1	chr22	-	2667	4	intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	18023	junction_2	31798.036763297197	NA	1	NA	FALSE	NA	NA	NA	A	coding	99	300	878	1177	5.0	0	True	NA	NA
PB.7804.24	chr22	+	3084	20	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5595	19637	intron_retention	FALSE	non_canonical	0	0	junction_12	165294.0631000792	NA	20	1	TRUE	NA	NA	NA	C	coding	564	1695	175	1869	30.0	20	True	AATAAA	-13
PB.7681.3	chr22	-	2737	5	intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	48560	junction_1	19317.341242715054	NA	1	NA	FALSE	NA	NA	NA	A	coding	99	300	949	1248	0.0	-2	True	NA	NA
PB.7681.2	chr22	-	2828	6	intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	13630	junction_2	29381.448031028016	NA	3	NA	FALSE	NA	NA	NA	A	coding	99	300	1040	1339	0.0	-1	True	NA	NA
PB.7681.5	chr22	-	3713	4	intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2397	junction_1	42657.5345122836	NA	1	NA	FALSE	NA	NA	NA	A	coding	99	300	1926	2225	0.0	18	True	NA	NA
PB.2247.2	chr11	-	3516	6	novel_not_in_catalog	TMEM123	novel	3321	4	NA	NA	-29	3	any annotated donor/acceptor	FALSE	canonical	1	688	junction_4	1033600.7323372018	NA	19	1	TRUE	NA	NA	NA	C	coding	120	363	616	978	15.0	190	False	AATAAA	-22
PB.3853.8	chr15	-	3749	22	incomplete-splice_match	CEP152	ENST00000380950.6	5635	27	61	10520	-1	-7949	3prime_fragment	FALSE	canonical	1	58024	junction_15	15992.743160585476	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3621	128	3748	45.0	-12	True	NA	NA
PB.3853.9	chr15	-	3531	20	incomplete-splice_match	CEP152	ENST00000399334.7	5097	26	-158	17758	1	13064	3prime_fragment	FALSE	canonical	1	58024	junction_13	15961.038938094836	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3339	193	3531	40.0	-77	False	NA	NA
PB.556.2	chr1	+	3022	3	novel_in_catalog	TMEM56-RWDD3	novel	1491	8	NA	NA	82826	-8	intron_retention	FALSE	canonical	1	86281	junction_1	68904.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	195	588	29	616	40.0	-22	True	ATTAAA	-10
PB.556.3	chr1	+	3117	2	incomplete-splice_match	RWDD3	ENST00000263893.10	1078	3	-5	6	-5	0	intron_retention	FALSE	canonical	1	86281	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	195	588	26	613	40.0	-19	True	ATTAAA	-10
PB.4527.4	chr16	+	2602	12	full-splice_match	DDX19B	ENST00000288071.10	3386	12	134	650	-5	-650	multi-exon	FALSE	canonical	1	3464	junction_11	160927.57918454605	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	112	1551	10.0	-7	True	TATAAA	-15
PB.10413.1	chr7	+	1716	11	full-splice_match	BZW2	ENST00000630952.2	1721	11	-6	11	-3	0	multi-exon	FALSE	canonical	1	19350	junction_5	335694.38612875255	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	879	1292	35.0	-917	False	AATAAA	-10
PB.10413.3	chr7	+	1799	12	full-splice_match	BZW2	ENST00000258761.7	1860	12	50	11	7	0	multi-exon	FALSE	canonical	1	454824	junction_1	199759.39985930268	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	116	1375	35.0	0	True	AATAAA	-10
PB.3590.1	chr14	+	1357	9	full-splice_match	AHSA1	ENST00000216479.7	1402	9	35	10	28	-6	multi-exon	TRUE	canonical	1	1522446	junction_1	295497.724163402	NA	0	NA	TRUE	NA	NA	NA	A	coding	338	1017	126	1142	40.0	-31	True	AATAAA	-9
PB.11014.1	chr8	-	2252	3	full-splice_match	NUDT18	ENST00000611621.1	1497	3	-32	-723	-10	723	multi-exon	TRUE	canonical	1	87671	junction_1	3373.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	323	972	130	1101	100.0	-11	True	NA	NA
PB.4527.3	chr16	+	1745	11	novel_in_catalog	DDX19B	novel	726	8	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	1	3464	junction_10	174546.62723650664	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	391	1503	25.0	-8	True	AATACA	-17
PB.11014.2	chr8	-	1771	2	full-splice_match	NUDT18	ENST00000613958.1	1754	2	-14	-3	-14	1	multi-exon	FALSE	canonical	1	94417	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	671	1342	10.0	-15	True	AGTAAA	-21
PB.1011.27	chr1	-	2243	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	22	680	combination_of_known_junctions	FALSE	canonical	1	25046	junction_1	222664.02517564775	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	128	1111	25.0	-49	True	AATAAA	-20
PB.4123.12	chr16	-	2507	11	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	84829	junction_8	302084.47515395423	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	1517	2236	30.0	5205	False	AATACA	-19
PB.8397.1	chr3	+	4796	27	full-splice_match	ATP2C1	ENST00000505330.5	4888	27	96	-4	90	4	multi-exon	FALSE	canonical	1	81268	junction_1	224764.1897892047	NA	8	NA	TRUE	NA	NA	NA	C	coding	953	2862	131	2992	25.0	0	True	AATAAA	-23
PB.12015.15	chrX	+	3567	20	full-splice_match	GK	ENST00000378943.7	3707	20	139	1	2	-1	multi-exon	FALSE	canonical	1	59	junction_18	8380.903751040845	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	41	1702	25.0	-6212	False	AATAAA	-17
PB.12015.14	chrX	+	3462	19	novel_in_catalog	GK	novel	3638	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	59	junction_17	8404.663501353736	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	551	1597	25.0	-6214	False	AATAAA	-17
PB.12015.11	chrX	+	3588	20	novel_not_in_catalog	GK	novel	3638	20	NA	NA	-52	-1	any annotated donor/acceptor	FALSE	canonical	1	59	junction_18	8363.75028772059	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	113	1723	25.0	3	True	AATAAA	-17
PB.12015.10	chrX	+	2652	19	full-splice_match	GK	ENST00000378945.7	2063	19	-53	-536	-53	457	multi-exon	FALSE	canonical	1	98	junction_12	24324.359647782945	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	114	1688	30.0	2	True	AATAAA	-15
PB.12015.13	chrX	+	3492	19	novel_in_catalog	GK	novel	3638	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	27	junction_4	8486.400979228292	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	581	1627	25.0	-6214	False	AATAAA	-17
PB.12015.12	chrX	+	2766	20	novel_not_in_catalog	GK	novel	3638	20	NA	NA	-52	473	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	8388.45525516272	NA	2	NA	TRUE	NA	NA	NA	C	coding	286	861	926	1786	20.0	3	True	AATAAA	-31
PB.10338.93	chr6	-	3012	15	incomplete-splice_match	THBS2	ENST00000617924.4	5280	22	-16	11484	-10	6834	3prime_fragment	FALSE	canonical	1	259346	junction_6	79077.96174816911	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	148	2649	25.0	-3	True	ATTAAA	-20
PB.10338.92	chr6	-	2802	16	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	7802	any annotated donor/acceptor	FALSE	canonical	1	488	junction_1	119724.7796207062	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	146	2599	10.0	-1	True	NA	NA
PB.10338.91	chr6	-	3014	16	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	8014	any annotated donor/acceptor	FALSE	canonical	1	488	junction_1	119724.7796207062	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	146	2599	40.0	-1	True	AATGAA	-15
PB.9295.7	chr5	-	2275	10	incomplete-splice_match	GFM2	ENST00000427854.6	1870	15	7	7809	7	-4392	3prime_fragment	FALSE	canonical	1	207162	junction_9	53770.72722009419	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	227	1093	45.0	-26	True	AATAAA	-38
PB.10338.97	chr6	-	2269	5	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-10	2552	any annotated donor/acceptor	FALSE	canonical	1	225	junction_1	146717.45949613495	NA	6	NA	TRUE	NA	NA	NA	C	coding	279	840	148	987	30.0	-3	True	ATTAAA	-14
PB.10338.96	chr6	-	2798	14	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	3587	any annotated donor/acceptor	FALSE	canonical	1	932	junction_1	110223.2014396136	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	146	2509	30.0	-1	True	TATAAA	-22
PB.10338.95	chr6	-	2951	14	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-10	3590	any annotated donor/acceptor	FALSE	canonical	1	1663	junction_1	110059.80466973776	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	148	2319	20.0	-3	True	TATAAA	-25
PB.10338.94	chr6	-	3428	13	incomplete-splice_match	THBS2	ENST00000617924.4	5280	22	-16	14658	-10	3660	3prime_fragment	FALSE	canonical	1	259346	junction_4	62406.98828317537	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	148	2433	50.0	-3	True	ATTAAA	-19
PB.8556.3	chr3	+	3098	15	novel_in_catalog	EIF2B5	novel	3038	15	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	378505	junction_3	95069.13941606511	NA	1	NA	TRUE	NA	NA	NA	C	coding	629	1890	34	1923	10.0	-29	True	ATTAAA	-14
PB.8556.2	chr3	+	3417	14	novel_in_catalog	EIF2B5	novel	3038	15	NA	NA	-6	14	intron_retention	TRUE	canonical	1	378505	junction_3	98361.24681351929	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	38	1786	30.0	-33	True	ATTAAA	-30
PB.10338.99	chr6	-	2854	4	incomplete-splice_match	THBS2	ENST00000617924.4	5280	22	-16	27992	-10	1881	3prime_fragment	FALSE	canonical	1	288867	junction_1	38734.03259265537	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	148	945	95.0	-3	True	NA	NA
PB.3433.5	chr14	+	3604	5	novel_not_in_catalog	GNG2	novel	577	4	NA	NA	-30	0	intron_retention	FALSE	canonical	1	449	junction_1	227239.88805596498	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-30	True	AATAAA	-17
PB.8556.7	chr3	+	3447	14	novel_in_catalog	EIF2B5	novel	3038	15	NA	NA	1	-2	intron_retention	TRUE	canonical	1	11892	junction_6	168715.402750789	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	996	1832	10.0	-15	True	ATTAAA	-14
PB.8556.6	chr3	+	3371	16	full-splice_match	EIF2B5	ENST00000648915.1	2538	16	-19	-814	0	13	multi-exon	FALSE	canonical	1	378505	junction_3	92790.12020444608	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	24	2189	5.0	-19	True	NA	NA
PB.8556.5	chr3	+	2950	16	novel_in_catalog	EIF2B5	novel	3038	15	NA	NA	2	-2	intron_retention	FALSE	canonical	1	6531	junction_6	200205.92614834243	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	870	1868	10.0	-22	True	ATTAAA	-14
PB.8556.4	chr3	+	2859	15	full-splice_match	EIF2B5	ENST00000465218.3	2850	15	-5	-4	0	-2	multi-exon	FALSE	canonical	1	378505	junction_3	95835.31233159246	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	29	1777	10.0	-24	True	ATTAAA	-14
PB.8435.9	chr3	+	6468	4	full-splice_match	ZBTB38	ENST00000507722.5	593	4	8	-5883	8	440	multi-exon	FALSE	canonical	1	17194	junction_1	75182.85090069115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	230	3817	35.0	7	True	ATTAAA	-19
PB.8927.4	chr4	+	5851	1	novel_in_catalog	OSTC	novel	1077	4	NA	NA	-18	-1153	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	10	True	NA	NA
PB.5203.1	chr17	+	4452	4	novel_not_in_catalog	LINC00674	novel	678	3	NA	NA	-1243	14063	intron_retention	FALSE	canonical	1	58115	junction_1	65751.84789798687	NA	5	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	0	True	AATAAA	-13
PB.81.1	chr1	-	3551	9	novel_not_in_catalog	LZIC	novel	652	5	NA	NA	31	2643	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	170521.8025904239	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	218	790	10.0	0	True	AATAAA	-32
PB.7228.2	chr20	-	4150	3	novel_in_catalog	PDRG1	novel	1998	5	NA	NA	65	-620	intron_retention	FALSE	canonical	1	325081	junction_2	62254.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	67	525	35.0	-10	True	NA	NA
PB.7228.3	chr20	-	5586	2	novel_in_catalog	PDRG1	novel	1998	5	NA	NA	54	-624	intron_retention	FALSE	canonical	1	325081	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	78	237	78	314	45.0	-21	True	NA	NA
PB.8435.1	chr3	+	3013	5	incomplete-splice_match	ZBTB38	ENST00000509842.5	1434	8	44253	44112	22	4271	internal_fragment	FALSE	canonical	1	29247	junction_4	41595.247078242006	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-1245	False	NA	NA
PB.7228.1	chr20	-	1332	5	full-splice_match	PDRG1	ENST00000202017.5	1998	5	52	614	52	-614	multi-exon	FALSE	canonical	1	325081	junction_4	56881.26877705436	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	80	481	25.0	-23	True	NA	NA
PB.8435.7	chr3	+	4401	7	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	16	83	combination_of_known_junctions	FALSE	canonical	1	14260	junction_5	41516.03776855397	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	716	4294	75.0	-12	True	NA	NA
PB.2931.1	chr12	-	3084	6	full-splice_match	MED13L	ENST00000548784.2	4250	6	1698	-532	1698	12	multi-exon	FALSE	canonical	1	303086	junction_3	47729.911269978285	NA	2	NA	TRUE	NA	NA	NA	A	coding	277	834	316	1149	85.0	NA	False	GGGGCT	-31
PB.7228.4	chr20	-	3555	4	novel_in_catalog	PDRG1	novel	1998	5	NA	NA	46	-628	intron_retention	FALSE	canonical	1	325081	junction_3	59877.26293195291	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	86	544	50.0	-29	True	NA	NA
PB.7228.5	chr20	-	1923	4	novel_in_catalog	PDRG1	novel	1998	5	NA	NA	52	-629	intron_retention	FALSE	canonical	1	325081	junction_3	52969.32791300599	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	80	640	50.0	-23	True	NA	NA
PB.6469.2	chr2	-	1826	2	novel_not_in_catalog	CLHC1	novel	2052	6	NA	NA	3	-4049	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	3717	False	ATTAAA	-18
PB.6469.1	chr2	-	2097	2	novel_not_in_catalog	CLHC1	novel	2052	6	NA	NA	-5	-890	intron_retention	FALSE	canonical	1	1991	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	B	coding	129	390	246	635	60.0	2	True	NA	NA
PB.8671.11	chr4	-	3151	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	152871.87481070182	NA	2	1	TRUE	NA	NA	NA	C	coding	857	2574	86	2659	20.0	1	True	AATAGA	-17
PB.11687.3	chr9	+	3537	17	full-splice_match	INVS	ENST00000262457.6	3709	17	-13	185	-13	27	multi-exon	FALSE	canonical	1	50524	junction_1	25738.692574285775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	199	3396	50.0	0	True	NA	NA
PB.6300.13	chr2	-	5482	11	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	4	226	intron_retention	FALSE	canonical	1	118112	junction_10	73897.59913691378	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	92	1201	30.0	-22	True	AATAAA	-14
PB.8671.13	chr4	-	2914	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-33	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	3	1	TRUE	NA	NA	NA	C	coding	857	2574	100	2673	20.0	-13	True	AATAGA	-17
PB.11687.2	chr9	+	3876	20	novel_not_in_catalog	INVS	novel	3709	17	NA	NA	-15	49	intron_retention	FALSE	canonical	1	3051	junction_1	46114.5219607402	NA	1	NA	TRUE	NA	NA	NA	C	coding	958	2877	837	3713	20.0	-2	True	AAGAAA	-16
PB.560.5	chr1	+	7367	34	full-splice_match	AGL	ENST00000361915.7	7368	34	0	1	0	-1	multi-exon	FALSE	canonical	1	70530	junction_1	40715.25194830505	NA	0	NA	TRUE	NA	NA	NA	C	coding	1532	4599	401	4999	15.0	-42	True	AATAAA	-17
PB.560.4	chr1	+	4305	29	incomplete-splice_match	AGL	ENST00000361915.7	7368	34	-2	11549	-2	-11549	3prime_fragment	FALSE	canonical	1	70530	junction_1	34081.69795595907	NA	0	NA	TRUE	NA	NA	NA	C	coding	1301	3903	403	4305	50.0	-44	True	AGTAAA	-31
PB.8192.7	chr3	+	5056	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	10	3707	10	2200	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	94	1923	35.0	0	True	AATAAA	-18
PB.2823.19	chr12	+	3220	7	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_6	303898.7158113794	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	257	1294	25.0	-20	True	NA	NA
PB.560.1	chr1	+	4006	29	novel_not_in_catalog	AGL	novel	7368	34	NA	NA	-17	-11549	any annotated donor/acceptor	TRUE	canonical	1	3378	junction_1	42064.018012029315	NA	0	NA	TRUE	NA	NA	NA	C	coding	1301	3903	104	4006	50.0	-59	True	AGTAAA	-31
PB.560.3	chr1	+	5021	34	full-splice_match	AGL	ENST00000361915.7	7368	34	284	2063	-121	-2063	multi-exon	FALSE	canonical	1	70530	junction_1	40715.25194830505	NA	0	NA	TRUE	NA	NA	NA	C	coding	1532	4599	117	4715	75.0	7	True	AAGAAA	-32
PB.560.2	chr1	+	7070	34	novel_not_in_catalog	AGL	novel	7368	34	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	3378	junction_1	47044.03322170541	NA	0	NA	TRUE	NA	NA	NA	C	coding	1532	4599	103	4701	15.0	-58	True	AATAAA	-18
PB.6630.1	chr2	-	2738	8	full-splice_match	STARD7	ENST00000337288.9	3368	8	622	8	-15	0	multi-exon	FALSE	canonical	1	783379	junction_7	303890.56734043226	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	66	875	40.0	652	False	AATAAA	-18
PB.9736.2	chr6	+	4544	2	full-splice_match	SMIM13	ENST00000416247.3	4688	2	137	7	-61	-7	multi-exon	FALSE	canonical	1	117526	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	930	1526	55.0	-16	True	AATAAA	-9
PB.12160.1	chrX	-	4078	3	full-splice_match	CYSLTR1	ENST00000373304.3	2576	3	-96	-1406	-28	1406	multi-exon	FALSE	canonical	1	66052	junction_1	9544.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	337	1014	390	1403	35.0	7	True	ATTAAA	-21
PB.12160.2	chrX	-	3651	3	full-splice_match	CYSLTR1	ENST00000373304.3	2576	3	-108	-967	-40	967	multi-exon	FALSE	canonical	1	66052	junction_1	9544.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	402	1415	25.0	-5	True	NA	NA
PB.12160.3	chrX	-	2579	3	full-splice_match	CYSLTR1	ENST00000373304.3	2576	3	-17	14	-17	2	multi-exon	FALSE	canonical	1	66052	junction_1	9544.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	311	1324	60.0	7	True	AATAAA	-8
PB.6581.6	chr2	+	4978	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	0	-1499	0	1499	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	3	NA	TRUE	NA	NA	NA	C	coding	292	879	26	904	25.0	0	True	NA	NA
PB.6296.7	chr2	+	5573	9	novel_in_catalog	RNF144A	novel	5743	9	NA	NA	-2	-88	combination_of_known_junctions	FALSE	canonical	1	3690	junction_1	39727.981080719415	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	361	1239	10.0	-2	True	AATACA	-14
PB.11687.5	chr9	+	3713	17	full-splice_match	INVS	ENST00000262457.6	3709	17	-11	7	-11	-7	multi-exon	FALSE	canonical	1	50524	junction_1	25738.692574285775	NA	1	NA	TRUE	NA	NA	NA	C	coding	1065	3198	197	3394	25.0	2	True	NA	NA
PB.3342.6	chr14	-	1902	8	novel_in_catalog	PSME2	novel	496	2	NA	NA	-4	0	intron_retention	FALSE	canonical	1	476633	junction_2	428824.69113537174	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-1	True	AATAAA	-20
PB.2662.40	chr12	-	1873	1	novel_in_catalog	PMEL	novel	2516	12	NA	NA	0	-2970	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.4424.31	chr16	+	5530	19	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	-319	-3	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	140923.37657669777	NA	4	NA	TRUE	NA	NA	NA	C	coding	953	2862	563	3424	85.0	15	True	NA	NA
PB.4424.30	chr16	+	3265	12	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	314	1	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	131257.84581111794	NA	1	NA	TRUE	NA	NA	NA	C	coding	698	2097	433	2529	15.0	8	True	AATAAA	-15
PB.3342.5	chr14	-	2377	6	novel_in_catalog	PSME2	novel	496	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	531123	junction_1	437616.0206599388	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-11	True	AATAAA	-20
PB.7037.1	chr2	+	3185	17	full-splice_match	ACSL3	ENST00000357430.7	5679	17	91	2403	-1	14	multi-exon	FALSE	canonical	1	231016	junction_3	274418.0201148138	NA	72	7	TRUE	NA	NA	NA	C	coding	709	2130	474	2603	25.0	-11	True	AATAAA	-40
PB.4125.1	chr16	-	3412	11	full-splice_match	AXIN1	ENST00000262320.7	3643	11	231	0	21	0	multi-exon	FALSE	canonical	1	57156	junction_10	120440.17849721081	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	142	2730	0.0	2848	False	AATAAA	-18
PB.3883.18	chr15	-	1971	7	full-splice_match	RAB27A	ENST00000336787.5	3446	7	48	1427	24	953	multi-exon	FALSE	canonical	1	142379	junction_6	110780.48136856059	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	195	860	60.0	45	True	NA	NA
PB.4125.2	chr16	-	4438	3	novel_not_in_catalog	AXIN1	novel	6340	8	NA	NA	21128	-18279	any annotated donor/acceptor	FALSE	canonical	1	1839	junction_2	1931.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	123	372	1098	1469	75.0	2263	False	AATATA	-36
PB.3883.10	chr15	-	2761	6	novel_in_catalog	RAB27A	novel	3459	6	NA	NA	-71	-636	no_combination_of_known_junctions	FALSE	canonical	1	15987	junction_5	162056.61470412122	NA	3	NA	TRUE	NA	NA	NA	C	coding	221	666	194	859	95.0	-40	False	NA	NA
PB.3883.13	chr15	-	2588	8	novel_in_catalog	RAB27A	novel	3459	6	NA	NA	7	-945	no_combination_of_known_junctions	FALSE	canonical	1	395	junction_7	197138.45077870673	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	330	995	35.0	6	True	NA	NA
PB.3883.12	chr15	-	2502	7	full-splice_match	RAB27A	ENST00000569493.5	1013	7	-45	-1444	-45	-940	multi-exon	FALSE	canonical	1	4634	junction_6	152738.42296881293	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	239	904	15.0	-33	False	NA	NA
PB.3883.14	chr15	-	2504	7	full-splice_match	RAB27A	ENST00000336787.5	3446	7	-22	964	-22	-964	multi-exon	FALSE	canonical	1	142379	junction_6	110780.48136856059	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	265	930	60.0	9	True	NA	NA
PB.3883.17	chr15	-	2297	7	novel_not_in_catalog	RAB27A	novel	3459	6	NA	NA	-163	-1118	any annotated donor/acceptor	FALSE	canonical	1	1118	junction_6	153883.8379265347	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	212	877	20.0	364	False	AATAAA	-16
PB.3883.16	chr15	-	2503	7	novel_in_catalog	RAB27A	novel	3459	6	NA	NA	-9	-971	combination_of_known_junctions	FALSE	canonical	1	424	junction_6	154110.23437209555	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	271	936	75.0	38	False	NA	NA
PB.9134.4	chr5	-	3061	19	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-4	-1	no_combination_of_known_junctions	FALSE	canonical	1	106	junction_12	307221.54658014915	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	918	1967	25.0	-3	True	AATAAA	-12
PB.9134.5	chr5	-	3039	19	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	-21	-1	any annotated donor/acceptor	FALSE	canonical	1	9409	junction_5	219941.35375550805	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	85	2355	25.0	-20	True	AATAAA	-12
PB.9134.6	chr5	-	3783	19	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	2	-6	intron_retention	FALSE	canonical	1	8474	junction_11	266756.3817330962	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	1042	1983	45.0	3	True	AATAAA	-7
PB.7138.17	chr20	+	1892	12	full-splice_match	NOP56	ENST00000329276.9	2400	12	487	21	0	13	multi-exon	FALSE	canonical	1	1017501	junction_1	658398.7177828109	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	30	1814	65.0	0	True	NA	NA
PB.9134.1	chr5	-	3136	19	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	1	106	junction_13	274287.6812323194	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	88	2448	15.0	-23	True	AATAAA	-16
PB.9134.2	chr5	-	3166	18	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	1	8238	junction_4	223010.67135661317	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	320	2077	45.0	-8	True	AATAAA	-7
PB.9134.3	chr5	-	2836	17	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	8238	junction_4	266435.60232357716	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	88	1740	20.0	-23	True	AATAAA	-14
PB.4558.1	chr16	-	2851	7	full-splice_match	TMEM231	ENST00000258173.10	4278	7	15	1412	-3	-5	multi-exon	FALSE	canonical	1	119	junction_4	40797.54936267618	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	63	1013	80.0	-34	True	NA	NA
PB.4558.3	chr16	-	2626	7	full-splice_match	TMEM231	ENST00000258173.10	4278	7	30	1622	6	-16	multi-exon	FALSE	canonical	1	119	junction_4	40797.54936267618	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	48	998	45.0	-19	True	ATTAAA	-12
PB.4558.2	chr16	-	2797	7	full-splice_match	TMEM231	ENST00000562410.5	2991	7	26	168	-2	46	multi-exon	FALSE	canonical	1	119	junction_4	46225.2725588383	NA	4	NA	TRUE	NA	NA	NA	C	coding	200	603	505	1107	15.0	-5	True	ATTAAA	-15
PB.9134.8	chr5	-	3017	19	full-splice_match	NSUN2	ENST00000264670.10	3303	19	278	8	29	-6	multi-exon	FALSE	canonical	1	362924	junction_17	141049.2812405374	NA	4	NA	TRUE	NA	NA	NA	C	coding	767	2304	35	2338	45.0	30	True	AATAAA	-7
PB.9134.9	chr5	-	3087	19	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	-22	-6	any annotated donor/acceptor	FALSE	canonical	1	3214	junction_14	221242.4534426242	NA	5	NA	TRUE	NA	NA	NA	C	coding	566	1701	708	2408	45.0	-21	True	AATAAA	-7
PB.5416.5	chr18	-	1985	8	novel_in_catalog	ABHD3	novel	2064	9	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	13617	junction_5	90803.12855529027	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	115	750	20.0	-6	True	AATAAA	-13
PB.5416.4	chr18	-	2448	8	novel_in_catalog	ABHD3	novel	2064	9	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	1	13617	junction_5	100315.85045632375	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	1117	1761	20.0	-29	True	AATAAA	-13
PB.5416.1	chr18	-	1905	7	full-splice_match	ABHD3	ENST00000580981.5	1836	7	-38	-31	0	0	multi-exon	FALSE	canonical	1	9803	junction_4	96852.78821317777	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	141	1211	10.0	-32	True	AATAAA	-20
PB.396.2	chr1	-	2339	20	novel_not_in_catalog	FAF1	novel	6817	19	NA	NA	26	10	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_19	171699.15836825073	NA	0	NA	TRUE	NA	NA	NA	A	coding	650	1953	213	2165	30.0	29	True	AATAAA	-22
PB.5416.3	chr18	-	2496	9	novel_in_catalog	ABHD3	novel	2064	9	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	77079	junction_4	70918.54667404976	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	140	811	20.0	-31	True	AATAAA	-13
PB.5416.2	chr18	-	2027	9	full-splice_match	ABHD3	ENST00000289119.6	2064	9	31	6	0	-6	multi-exon	FALSE	canonical	1	131831	junction_5	56284.12450682696	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	110	1339	15.0	-1	True	AATAAA	-14
PB.6981.5	chr2	+	2452	5	full-splice_match	RPE	ENST00000438204.6	796	5	-48	-1608	11	-7	multi-exon	FALSE	canonical	1	23429	junction_1	62316.089858478765	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	192	674	35.0	-3	True	AATAAA	-18
PB.5494.16	chr18	+	3318	30	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	3278	junction_1	104154.81817844996	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	507	3011	50.0	0	True	AATAAA	-18
PB.8257.19	chr3	+	1973	6	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	2	-171	combination_of_known_junctions	FALSE	canonical	1	3524	junction_5	58530.70062249383	NA	5	NA	TRUE	NA	NA	NA	C	coding	146	441	277	717	85.0	6	True	NA	NA
PB.11929.19	chr9	-	2133	9	novel_in_catalog	DPH7	novel	1311	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	8067	junction_8	114654.8095507091	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	974	1804	50.0	11	True	ATTAAA	-12
PB.8257.18	chr3	+	2650	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	11	-775	0	-117	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	279	1274	65.0	4	True	AATAAA	-41
PB.1339.13	chr10	-	3062	9	novel_not_in_catalog	ABI1	novel	3362	10	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	443	junction_2	321521.5957495847	NA	2	NA	TRUE	NA	NA	NA	C	coding	285	858	91	948	40.0	-1	True	AATAAA	-16
PB.1339.12	chr10	-	3239	11	full-splice_match	ABI1	ENST00000359188.8	3492	11	-49	302	2	0	multi-exon	FALSE	canonical	1	141762	junction_8	288084.1634703477	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	122	1564	40.0	-1	True	AATAAA	-16
PB.1339.11	chr10	-	3229	10	full-splice_match	ABI1	ENST00000376139.6	3516	10	-15	302	0	0	multi-exon	FALSE	canonical	1	215007	junction_3	227564.63013541157	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	124	1554	40.0	-3	True	AATAAA	-16
PB.1339.10	chr10	-	3157	10	full-splice_match	ABI1	ENST00000376138.7	3503	10	44	302	0	0	multi-exon	FALSE	canonical	1	141762	junction_7	269845.0802513852	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	124	1482	40.0	-3	True	AATAAA	-16
PB.1339.17	chr10	-	3047	10	full-splice_match	ABI1	ENST00000376139.6	3516	10	-15	484	0	-182	multi-exon	FALSE	canonical	1	215007	junction_3	227564.63013541157	NA	2	1	TRUE	NA	NA	NA	C	coding	476	1431	124	1554	35.0	-3	True	ATTAAA	-19
PB.1339.16	chr10	-	2787	8	novel_in_catalog	ABI1	novel	3362	10	NA	NA	-2	-180	combination_of_known_junctions	FALSE	canonical	1	149523	junction_2	222125.107781858	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	126	1292	30.0	-5	True	ATTAAA	-21
PB.1339.14	chr10	-	2950	8	novel_not_in_catalog	ABI1	novel	3362	10	NA	NA	381	0	any annotated donor/acceptor	FALSE	canonical	1	3106	junction_7	281466.0563761079	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	364	1275	40.0	501	False	AATAAA	-16
PB.7138.18	chr20	+	1832	11	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-413	intron_retention	FALSE	canonical	1	1017501	junction_1	662423.7502480493	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	30	1049	80.0	0	True	NA	NA
PB.1339.19	chr10	-	2921	10	full-splice_match	ABI1	ENST00000376170.8	3362	10	-44	485	-1	-183	multi-exon	FALSE	canonical	1	141762	junction_7	289057.89785592933	NA	3	NA	TRUE	NA	NA	NA	C	coding	451	1356	74	1429	35.0	16	True	ATTAAA	-18
PB.1339.18	chr10	-	2885	9	novel_in_catalog	ABI1	novel	3362	10	NA	NA	-21	-184	combination_of_known_junctions	FALSE	canonical	1	282716	junction_2	198609.80029491874	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	51	1394	40.0	-18	True	ATTAAA	-17
PB.8970.1	chr4	-	1153	5	full-splice_match	NUDT6	ENST00000304430.9	1169	5	9	7	0	-1	multi-exon	FALSE	canonical	1	58118	junction_4	13358.146790910032	NA	0	NA	TRUE	NA	NA	NA	A	coding	316	951	26	976	40.0	-1	True	AATAAA	-12
PB.7138.19	chr20	+	1934	11	novel_in_catalog	NOP56	novel	2400	12	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	1	5833	junction_1	826175.0753815076	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	553	1839	20.0	-4694	False	AATAAA	-12
PB.8257.15	chr3	+	3532	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	56366.66000252277	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	453	1448	40.0	2	True	NA	NA
PB.11127.8	chr8	-	4359	7	novel_in_catalog	PCMTD1	novel	3697	4	NA	NA	24	-6	combination_of_known_junctions	FALSE	canonical	1	12125	junction_4	146627.43245581072	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	1085	1594	20.0	3	True	AATAAA	-15
PB.831.13	chr1	-	2188	4	novel_in_catalog	ISG20L2	novel	3178	3	NA	NA	7	155	no_combination_of_known_junctions	FALSE	canonical	1	3652	junction_3	223301.5158813054	NA	3	NA	TRUE	NA	NA	NA	C	coding	353	1062	226	1287	65.0	22	True	NA	NA
PB.11962.1	chrX	+	2294	1	incomplete-splice_match	WWC3	ENST00000380861.8	6647	23	126614	9	126381	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	169	510	1619	2128	45.0	NA	False	ATTAAA	-13
PB.1725.1	chr10	-	3191	3	novel_in_catalog	FUOM	novel	709	6	NA	NA	12	1171	intron_retention	FALSE	canonical	1	227594	junction_2	15305.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	142	429	7	435	75.0	5	True	AATAAA	-12
PB.11127.2	chr8	-	4077	6	full-splice_match	PCMTD1	ENST00000522514.5	1287	6	-31	-2759	-31	-1	multi-exon	FALSE	canonical	1	135859	junction_1	104093.4855206607	NA	3	NA	TRUE	NA	NA	NA	C	coding	357	1074	234	1307	15.0	-32	True	AATAAA	-20
PB.11127.3	chr8	-	4209	7	novel_not_in_catalog	PCMTD1	novel	3697	4	NA	NA	26	-1	any annotated donor/acceptor	FALSE	canonical	1	2512	junction_1	148876.89548014346	NA	5	NA	TRUE	NA	NA	NA	C	coding	238	717	239	955	15.0	-37	True	AATAAA	-20
PB.4131.1	chr16	+	2076	2	full-splice_match	NHLRC4	ENST00000540585.1	2071	2	-6	1	3	-1	multi-exon	FALSE	canonical	1	13889	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	A	coding	123	372	630	1001	5.0	-7339	False	AATAAA	-15
PB.10184.1	chr6	+	2756	6	novel_not_in_catalog	NUS1	novel	4676	5	NA	NA	-42	-2055	any annotated donor/acceptor	FALSE	canonical	1	170	junction_5	16529.866116820187	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	749	1186	30.0	-9	True	AATAAA	-13
PB.8257.17	chr3	+	3936	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	0	406	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	56366.66000252277	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	451	1446	85.0	4	True	AATACA	-41
PB.11127.4	chr8	-	3836	6	full-splice_match	PCMTD1	ENST00000519559.1	1204	6	-66	-2566	0	-1	multi-exon	FALSE	canonical	1	12125	junction_4	144583.68420592966	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	557	1066	15.0	-1	True	AATAAA	-20
PB.11127.5	chr8	-	3720	5	novel_in_catalog	PCMTD1	novel	3697	4	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	14704	junction_4	139959.80611478246	NA	3	NA	TRUE	NA	NA	NA	C	coding	181	546	405	950	15.0	-2	True	AATAAA	-20
PB.8257.16	chr3	+	2147	12	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	61155.67043994104	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	781	1518	25.0	2	True	NA	NA
PB.8257.11	chr3	+	2153	7	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-3	-169	combination_of_known_junctions	FALSE	canonical	1	3524	junction_6	60156.43561143082	NA	6	NA	TRUE	NA	NA	NA	C	coding	146	441	455	895	85.0	0	True	NA	NA
PB.9244.3	chr5	-	2958	4	novel_not_in_catalog	SMIM15	novel	2889	3	NA	NA	60	1613	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	294866.0027684892	NA	9	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	57	True	TATAAA	-15
PB.8467.6	chr3	+	1996	13	novel_in_catalog	EIF2A	novel	565	3	NA	NA	7	-3	intron_retention	FALSE	canonical	1	6347	junction_3	424162.1903953395	NA	2	NA	TRUE	NA	NA	NA	C	coding	526	1581	88	1668	30.0	-13	True	AATGAA	-18
PB.2121.6	chr11	-	3238	9	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-38	471	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	107069.05628232416	NA	2	NA	TRUE	NA	NA	NA	B	coding	471	1416	1244	2659	85.0	4	True	NA	NA
PB.2121.5	chr11	-	3485	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	28	471	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	97433.63516317715	NA	2	NA	TRUE	NA	NA	NA	B	coding	471	1416	1491	2906	85.0	-7	True	NA	NA
PB.2121.4	chr11	-	3642	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-35	642	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	97433.63516317715	NA	2	NA	TRUE	NA	NA	NA	B	coding	471	1416	1477	2892	30.0	7	True	GATAAA	-13
PB.2121.3	chr11	-	3859	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-29	-675	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	97433.63516317715	NA	4	NA	TRUE	NA	NA	NA	B	coding	471	1416	1471	2886	40.0	13	True	AATAAA	-37
PB.2121.2	chr11	-	4030	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-38	-513	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	97433.63516317715	NA	2	NA	TRUE	NA	NA	NA	B	coding	471	1416	1480	2895	45.0	4	True	AATAAA	-13
PB.2121.1	chr11	-	5695	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-20	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	97433.63516317715	NA	4	1	TRUE	NA	NA	NA	B	coding	471	1416	1462	2877	30.0	22	True	AATAAA	-11
PB.1022.1	chr1	+	2902	26	novel_in_catalog	PTPRC	novel	731	7	NA	NA	9	-6303	combination_of_known_junctions	TRUE	canonical	1	197273	junction_3	332850.46545093245	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2748	154	2901	75.0	-67	True	NA	NA
PB.4896.10	chr17	+	5525	11	full-splice_match	ZNF207	ENST00000394673.6	2124	11	18	-3419	-8	3311	multi-exon	FALSE	canonical	1	400245	junction_8	465109.04421080655	NA	11	NA	TRUE	NA	NA	NA	C	coding	463	1392	131	1522	35.0	-1	True	AATAAA	-28
PB.4896.11	chr17	+	2210	11	full-splice_match	ZNF207	ENST00000394673.6	2124	11	19	-105	-7	-3	multi-exon	FALSE	canonical	1	400245	junction_8	465109.04421080655	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	130	1521	30.0	0	True	AATAAA	-19
PB.4896.12	chr17	+	4232	15	novel_not_in_catalog	AC005899.4	novel	514	5	NA	NA	25680	19672	any annotated donor/acceptor	FALSE	canonical	1	37203	junction_12	582258.7869805847	NA	0	NA	TRUE	NA	NA	NA	B	coding	494	1485	129	1613	5.0	1	True	ATTAAA	-15
PB.4896.13	chr17	+	2097	11	full-splice_match	ZNF207	ENST00000394673.6	2124	11	20	7	-6	-7	multi-exon	FALSE	canonical	1	400245	junction_8	465109.04421080655	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	129	1520	35.0	1	True	AATAAA	-8
PB.4896.14	chr17	+	2310	12	full-splice_match	ZNF207	ENST00000394670.8	13781	12	52	11419	4	16	multi-exon	FALSE	canonical	1	763986	junction_5	382073.3821785055	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	118	1602	15.0	12	True	AATAAA	-38
PB.4896.15	chr17	+	2179	12	full-splice_match	ZNF207	ENST00000394670.8	13781	12	52	11550	4	-7	multi-exon	FALSE	canonical	1	763986	junction_5	382073.3821785055	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	118	1602	35.0	12	True	AATAAA	-8
PB.2121.9	chr11	-	2675	9	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-38	1	intron_retention	FALSE	canonical	0	0	junction_2	101243.26088675915	NA	2	NA	TRUE	NA	NA	NA	B	coding	296	891	240	1130	10.0	4	True	AATAAA	-16
PB.2121.8	chr11	-	2303	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-29	22	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	97433.63516317715	NA	2	NA	TRUE	NA	NA	NA	B	coding	277	831	1471	2301	65.0	13	True	AAAACA	-21
PB.558.1	chr1	-	4433	23	full-splice_match	DPYD	ENST00000370192.7	4412	23	-24	3	2	-3	multi-exon	TRUE	canonical	1	133024	junction_10	53026.686051509685	NA	0	NA	TRUE	NA	NA	NA	A	coding	1025	3078	126	3203	20.0	0	True	AATAAA	-18
PB.2626.3	chr12	+	4670	6	incomplete-splice_match	ZNF740	ENST00000416904.4	8578	7	425	4322	421	2063	5prime_fragment	FALSE	canonical	1	148421	junction_3	34621.19698912792	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	860	1441	45.0	-485	False	ATTAAA	-23
PB.2626.2	chr12	+	2858	7	full-splice_match	ZNF740	ENST00000416904.4	8578	7	0	5720	0	665	multi-exon	FALSE	canonical	1	148421	junction_4	34507.459743027546	NA	4	NA	TRUE	NA	NA	NA	C	coding	193	582	446	1027	20.0	-22	True	NA	NA
PB.2626.1	chr12	+	4309	7	full-splice_match	ZNF740	ENST00000416904.4	8578	7	-4	4273	-4	2112	multi-exon	FALSE	canonical	1	148421	junction_4	34507.459743027546	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	450	1031	15.0	-26	True	AATAAA	-26
PB.519.11	chr1	+	3428	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	51	2642	51	94	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	1	NA	TRUE	NA	NA	NA	C	coding	984	2955	309	3263	30.0	0	True	TTTAAA	-23
PB.519.10	chr1	+	2051	3	incomplete-splice_match	PKN2	ENST00000316005.11	2632	11	48	44656	48	-43282	3prime_fragment	FALSE	canonical	1	161215	junction_1	75560.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	312	872	100.0	-3	True	NA	NA
PB.6981.6	chr2	+	2586	7	full-splice_match	RPE	ENST00000436630.6	1128	7	14	-1472	14	-4	multi-exon	FALSE	canonical	1	23009	junction_2	55178.729475727836	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	65	805	40.0	0	True	AATAAA	-21
PB.519.12	chr1	+	5168	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	51	902	51	-902	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	309	3263	15.0	0	True	AATAAA	-20
PB.129.1	chr1	-	3353	15	full-splice_match	ALDH4A1	ENST00000375341.7	3363	15	10	0	10	0	multi-exon	FALSE	canonical	1	167822	junction_6	69714.46643832693	NA	0	NA	TRUE	NA	NA	NA	A	coding	563	1692	249	1940	25.0	-10	True	AATAAA	-14
PB.2859.17	chr12	+	5845	34	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	-25	2	any annotated donor/acceptor	FALSE	canonical	1	6805	junction_26	101981.29801242656	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	55	2880	10.0	16	True	AATAAA	-17
PB.2859.16	chr12	+	3447	25	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	-26	0	intron_retention	FALSE	canonical	1	3050	junction_7	104387.74503473815	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	649	2721	90.0	15	True	NA	NA
PB.2859.15	chr12	+	5892	32	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	-28	-1	intron_retention	FALSE	canonical	1	15	junction_10	87281.22633548654	NA	3	1	TRUE	NA	NA	NA	C	coding	758	2277	1414	3690	10.0	13	True	AATAAA	-18
PB.2859.14	chr12	+	3533	32	incomplete-splice_match	WASHC4	ENST00000332180.9	5812	33	63	4339	5	66	3prime_fragment	FALSE	canonical	1	241415	junction_12	62704.12498060847	NA	0	NA	TRUE	NA	NA	NA	C	coding	1153	3462	25	3486	25.0	46	True	AATAAA	-20
PB.2859.13	chr12	+	3783	6	incomplete-splice_match	WASHC4	ENST00000311317.8	2897	25	21	28895	20	494	intron_retention	FALSE	canonical	1	265720	junction_2	54739.84809259156	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	67	552	55.0	4	True	AGTAAA	-39
PB.5230.9	chr17	-	2569	5	novel_in_catalog	NAT9	novel	1875	7	NA	NA	0	-8	intron_retention	FALSE	canonical	1	215156	junction_3	102230.92945630495	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	1378	1833	30.0	-1	True	TATAAA	-12
PB.2859.11	chr12	+	5657	32	novel_in_catalog	WASHC4	novel	576	7	NA	NA	18	-1	no_combination_of_known_junctions	FALSE	canonical	1	11646	junction_24	85273.02047549111	NA	1	NA	TRUE	NA	NA	NA	C	coding	1128	3387	69	3455	10.0	2	True	AATAAA	-18
PB.2859.10	chr12	+	3341	24	incomplete-splice_match	WASHC4	ENST00000311317.8	2897	25	19	0	18	0	intron_retention	FALSE	canonical	1	241415	junction_12	48749.05490362063	NA	3	NA	TRUE	NA	NA	NA	C	coding	848	2547	69	2615	90.0	2	True	NA	NA
PB.12319.5	chrX	+	1682	3	full-splice_match	MAGEA3	ENST00000598245.2	1762	3	24	56	24	-56	multi-exon	FALSE	canonical	1	50	junction_1	1863.5	NA	8	NA	TRUE	NA	NA	NA	C	coding	314	945	235	1179	15.0	NA	False	ATTAAA	-15
PB.2859.19	chr12	+	4913	31	incomplete-splice_match	WASHC4	ENST00000332180.9	5812	33	38	3317	-20	1088	intron_retention	FALSE	canonical	1	241415	junction_12	52176.983522963026	NA	2	NA	TRUE	NA	NA	NA	C	coding	1138	3417	50	3466	40.0	21	True	AATAAA	-9
PB.2859.18	chr12	+	4828	6	incomplete-splice_match	WASHC4	ENST00000311317.8	2897	25	35	27836	-23	1553	intron_retention	FALSE	canonical	1	265720	junction_2	54739.84809259156	NA	2	NA	TRUE	NA	NA	NA	C	coding	161	486	53	538	80.0	18	True	NA	NA
PB.7456.13	chr21	+	1968	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	11	3060	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	14	1	TRUE	NA	NA	NA	C	coding	129	390	336	725	35.0	-9	True	AATAAA	-40
PB.8647.2	chr4	+	2035	12	novel_in_catalog	TMEM175	novel	525	5	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	1	19832	junction_3	128408.47672477413	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	610	1878	20.0	-46	False	NA	NA
PB.11348.8	chr8	-	2699	9	novel_in_catalog	ST3GAL1	novel	6764	10	NA	NA	-40	-29	combination_of_known_junctions	FALSE	canonical	1	10500	junction_7	67211.50905711294	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	815	1837	95.0	69	False	NA	NA
PB.1407.3	chr10	+	2434	6	novel_in_catalog	TIMM23B	novel	1142	7	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46624.10404672674	NA	2	1	TRUE	NA	NA	NA	C	coding	104	315	335	649	20.0	NA	False	ATTAAA	-18
PB.1407.2	chr10	+	2495	7	full-splice_match	TIMM23B	ENST00000374098.6	1142	7	20	-1373	4	0	multi-exon	FALSE	canonical	0	0	junction_1	45202.47597938267	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	143	709	20.0	NA	False	ATTAAA	-19
PB.1407.1	chr10	+	4713	15	novel_in_catalog	TIMM23B	novel	1142	7	NA	NA	1	35647	intron_retention	FALSE	canonical	0	0	junction_1	59728.84382232792	NA	3	NA	TRUE	NA	NA	NA	C	coding	686	2061	2342	4402	25.0	NA	False	AATAAA	-18
PB.2135.3	chr11	-	2788	9	novel_in_catalog	DHCR7	novel	979	3	NA	NA	11	-1	intron_retention	FALSE	canonical	1	21447	junction_1	328655.35928002815	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	267	1637	15.0	-7	False	NA	NA
PB.2135.4	chr11	-	2618	9	full-splice_match	DHCR7	ENST00000355527.7	2666	9	45	3	-3	-3	multi-exon	FALSE	canonical	1	710903	junction_8	141913.8576667528	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	233	1660	25.0	2	True	NA	NA
PB.2135.5	chr11	-	2082	9	full-splice_match	DHCR7	ENST00000355527.7	2666	9	48	536	0	15	multi-exon	FALSE	canonical	1	710903	junction_8	141913.8576667528	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	230	1657	20.0	5	True	AATAAA	-23
PB.1407.5	chr10	+	2324	7	full-splice_match	TIMM23B	ENST00000374098.6	1142	7	27	-1209	11	-164	multi-exon	FALSE	canonical	0	0	junction_1	45202.47597938267	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	136	702	45.0	NA	False	AATAAA	-10
PB.1407.4	chr10	+	2760	7	novel_not_in_catalog	TIMM23B	novel	1142	7	NA	NA	11	-136	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	17194.831553082713	NA	5	NA	TRUE	NA	NA	NA	C	coding	113	342	1788	2129	40.0	NA	False	AATAAA	-38
PB.10164.2	chr6	+	2465	5	novel_not_in_catalog	TRAF3IP2-AS1	novel	2191	2	NA	NA	-56	1012	any annotated donor/acceptor	FALSE	canonical	1	1489	junction_2	16840.606021978543	NA	20	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-444	False	NA	NA
PB.1407.8	chr10	+	3177	16	novel_in_catalog	TIMM23B	novel	1142	7	NA	NA	-10	35648	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60938.65418759718	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	922	2865	25.0	NA	False	AATAAA	-19
PB.12316.3	chrX	-	1992	6	full-splice_match	MAGEA2	ENST00000623438.3	2009	6	17	0	11	0	multi-exon	FALSE	canonical	0	0	junction_4	358.1253411865739	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	493	1437	20.0	NA	False	AATAAA	-16
PB.11722.16	chr9	-	6345	14	novel_not_in_catalog	PTBP3	novel	7995	14	NA	NA	15	-870	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	168158.08167088125	NA	2	1	TRUE	NA	NA	NA	C	coding	452	1359	441	1799	5.0	-31	True	ATTAAA	-15
PB.10164.3	chr6	+	2261	4	full-splice_match	TRAF3IP2-AS1	ENST00000449449.6	784	4	-47	-1430	-1	1011	multi-exon	FALSE	canonical	1	6261	junction_2	15673.536167693619	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	71	301	35.0	-384	False	NA	NA
PB.11780.16	chr9	+	2344	12	novel_not_in_catalog	NEK6	novel	2578	10	NA	NA	53	-535	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	300836.78106552694	NA	2	1	TRUE	NA	NA	NA	C	coding	347	1044	345	1388	60.0	-4893	False	NA	NA
PB.2705.9	chr12	+	3530	4	incomplete-splice_match	DTX3	ENST00000548198.5	3199	5	0	8	0	-5	intron_retention	FALSE	canonical	1	323892	junction_2	42355.44021990826	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	1526	2659	25.0	0	True	AATAAA	-18
PB.2705.8	chr12	+	3520	4	novel_in_catalog	DTX3	novel	2067	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	72849	junction_2	156430.77041156436	NA	6	1	TRUE	NA	NA	NA	C	coding	387	1164	1479	2642	15.0	-2	True	AATAAA	-25
PB.2705.7	chr12	+	1979	7	novel_in_catalog	DTX3	novel	2067	6	NA	NA	0	-28	combination_of_known_junctions	FALSE	canonical	1	66776	junction_1	171388.00200689858	NA	2	NA	TRUE	NA	NA	NA	C	coding	350	1053	307	1359	75.0	0	True	NA	NA
PB.2705.6	chr12	+	2239	7	novel_in_catalog	DTX3	novel	2067	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	17196	junction_1	182140.4034002493	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	537	1589	15.0	-3	True	AATAAA	-25
PB.2705.5	chr12	+	2259	7	novel_in_catalog	DTX3	novel	2067	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	17196	junction_1	160029.007593068	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	587	1609	15.0	-4	True	AATAAA	-25
PB.2705.4	chr12	+	3182	5	novel_in_catalog	DTX3	novel	2067	6	NA	NA	-1	1	intron_retention	FALSE	canonical	1	72849	junction_2	164434.09927004192	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1481	2533	15.0	-4	True	AATAAA	-24
PB.2705.3	chr12	+	2710	6	novel_in_catalog	DTX3	novel	2067	6	NA	NA	0	-28	intron_retention	FALSE	canonical	1	206657	junction_1	100978.03479648434	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	1068	2090	75.0	0	True	NA	NA
PB.2705.2	chr12	+	4794	2	full-splice_match	DTX3	ENST00000548478.1	2270	2	-189	-2335	-3	1	multi-exon	FALSE	canonical	1	427641	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	1878	2693	15.0	-6	True	AATAAA	-24
PB.2705.1	chr12	+	1998	7	full-splice_match	DTX3	ENST00000337737.7	2029	7	3	28	0	-28	multi-exon	FALSE	canonical	1	66776	junction_1	145315.2433699461	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	356	1378	75.0	0	True	NA	NA
PB.11207.1	chr8	+	3382	3	novel_in_catalog	FABP5	novel	851	4	NA	NA	156	-4	intron_retention	FALSE	canonical	1	778	junction_2	2.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	2871	3176	30.0	-17	False	AATAAA	-17
PB.9368.19	chr5	+	3450	25	novel_in_catalog	PAM	novel	570	2	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	236448	junction_14	232456.76096916612	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	409	3009	40.0	9	True	AGTAAA	-21
PB.9368.18	chr5	+	3786	26	novel_in_catalog	PAM	novel	570	2	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	227518.17256535444	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2925	418	3342	35.0	0	True	AGTAAA	-24
PB.8254.1	chr3	+	2982	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	301	-2031	301	2031	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	249	750	168	917	35.0	-1702	False	AATAAA	-34
PB.8254.6	chr3	+	2548	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	35	-1331	35	1331	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	360	1083	101	1183	45.0	2	True	AATGAA	-39
PB.8254.7	chr3	+	2509	2	antisense	novelGene_AC021660.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	coding	360	1083	101	1183	30.0	2	True	AATAAA	-15
PB.8254.4	chr3	+	2882	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	78	-1708	78	1708	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	360	1083	58	1140	75.0	-1	True	AATAGA	-13
PB.8254.5	chr3	+	2044	2	antisense	novelGene_AC021660.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	493	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	306	921	146	1066	25.0	-2002	False	ATTAAA	-16
PB.7076.20	chr2	+	3303	6	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	-2	2028	no_combination_of_known_junctions	FALSE	canonical	1	3496	junction_3	56744.51206592581	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	11	True	NA	NA
PB.9368.10	chr5	+	3671	25	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	25482	junction_14	308137.7134683424	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	424	3024	20.0	-6	True	AATAAA	-14
PB.9368.13	chr5	+	3341	24	novel_in_catalog	PAM	novel	570	2	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	1	236448	junction_14	250533.15842062802	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	420	2819	30.0	-2	True	AATAAA	-14
PB.9368.12	chr5	+	2573	1	novel_in_catalog	PAM	novel	570	2	NA	NA	-15	-80718	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-6	True	NA	NA
PB.9368.15	chr5	+	4046	27	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-12	2	any annotated donor/acceptor	FALSE	canonical	1	17650	junction_15	284363.16913605493	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	421	3396	20.0	-3	True	AATAAA	-17
PB.9368.14	chr5	+	3255	23	novel_in_catalog	PAM	novel	570	2	NA	NA	-13	5	combination_of_known_junctions	FALSE	canonical	1	11050	junction_20	284041.07726100995	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	422	2563	20.0	-4	True	AATAAA	-26
PB.9368.17	chr5	+	3933	25	novel_in_catalog	PAM	novel	570	2	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	17704	junction_3	276206.4530702551	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	954	3284	15.0	0	True	AATAAA	-16
PB.9368.16	chr5	+	3782	26	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-11	2	any annotated donor/acceptor	FALSE	canonical	1	4018	junction_4	309142.66458807397	NA	2	1	TRUE	NA	NA	NA	C	coding	790	2373	760	3132	20.0	-2	True	AATAAA	-17
PB.11851.10	chr9	+	2780	19	novel_not_in_catalog	GPR107	novel	7353	20	NA	NA	-10	1	any annotated donor/acceptor	FALSE	canonical	1	2698	junction_18	122312.98162784867	NA	2	1	TRUE	NA	NA	NA	C	coding	551	1656	23	1678	10.0	4	True	TTTAAA	-6
PB.12200.11	chrX	-	3143	6	novel_not_in_catalog	MORF4L2	novel	1824	4	NA	NA	6	0	intron_retention	FALSE	canonical	1	296	junction_2	1143059.2242027707	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	1621	2487	40.0	-1	True	AATAAA	-18
PB.12200.10	chrX	-	1744	3	full-splice_match	MORF4L2	ENST00000492116.5	582	3	31	-1193	-27	-1	multi-exon	FALSE	canonical	1	163214	junction_1	126612.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	218	1084	25.0	11	False	AATAAA	-22
PB.12200.12	chrX	-	1975	6	novel_not_in_catalog	MORF4L2	novel	1824	4	NA	NA	6	0	intron_retention	FALSE	canonical	1	125	junction_3	1143326.5964406496	NA	8	1	TRUE	NA	NA	NA	C	coding	288	867	453	1319	40.0	-1	True	AATAAA	-18
PB.5197.11	chr17	-	1781	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	50	2575	0	283	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	59	1429	25.0	-1	True	AATAAA	-28
PB.5197.10	chr17	-	2466	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	40	1900	0	-13	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	69	1439	55.0	-11	True	ATTAAA	-34
PB.5197.13	chr17	-	1505	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	40	2861	0	-3	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	69	1439	10.0	-11	True	ATTAAA	-22
PB.5197.12	chr17	-	1678	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	22	2706	0	152	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	87	1457	40.0	-29	True	AATACA	-23
PB.3566.2	chr14	-	1673	6	full-splice_match	PGF	ENST00000553716.5	1699	6	29	-3	0	3	multi-exon	FALSE	canonical	1	85766	junction_1	38109.88568547536	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	356	805	25.0	-1	True	AATAAA	-14
PB.3566.1	chr14	-	1737	7	full-splice_match	PGF	ENST00000555567.5	1927	7	187	3	0	-3	multi-exon	FALSE	canonical	1	103863	junction_2	31426.083900692007	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	356	868	25.0	-1	True	AATAAA	-15
PB.55.2	chr1	-	3484	13	novel_not_in_catalog	NOL9	novel	6649	12	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	73856.00851036653	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	34	2142	30.0	-23	True	ATTAAA	-17
PB.9075.1	chr4	-	4393	1	genic	AC019163.1	novel	NA	NA	NA	NA	-28	-7826	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	126	381	3	383	40.0	10	True	AATAAA	-19
PB.9075.2	chr4	-	1868	1	genic	AC019163.1	novel	NA	NA	NA	NA	-68	-10391	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	131	396	311	706	80.0	-30	True	TTTAAA	-39
PB.7456.10	chr21	+	2126	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	9	3277	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-11	True	AATAAA	-12
PB.1417.4	chr10	+	2610	6	full-splice_match	UBE2D1	ENST00000615793.1	2621	6	11	0	11	0	multi-exon	FALSE	canonical	1	14903	junction_2	170860.11150716248	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	295	624	15.0	-7859	False	ATTAAA	-18
PB.1417.5	chr10	+	3644	5	novel_in_catalog	UBE2D1	novel	2659	7	NA	NA	28	0	intron_retention	FALSE	canonical	1	256332	junction_1	88290.28864065402	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	AATAAA	-15
PB.3265.1	chr13	-	1934	1	antisense	novelGene_ARHGEF7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	TTTAAA	-39
PB.10450.10	chr7	+	2592	8	novel_in_catalog	SNX10	novel	2613	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	12797	junction_2	144653.20280066322	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	173	847	50.0	-24	True	ATTAAA	-5
PB.1417.1	chr10	+	1510	7	full-splice_match	UBE2D1	ENST00000373910.8	2659	7	-8	1157	-8	1	multi-exon	FALSE	canonical	1	256332	junction_1	91249.69059567027	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	236	679	30.0	-7882	False	AATAAA	-16
PB.1417.2	chr10	+	2646	7	full-splice_match	UBE2D1	ENST00000373910.8	2659	7	10	3	6	-1	multi-exon	FALSE	canonical	1	256332	junction_1	91249.69059567027	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	218	661	10.0	2	True	ATTAAA	-17
PB.1417.3	chr10	+	1469	6	full-splice_match	UBE2D1	ENST00000615793.1	2621	6	-4	1156	0	0	multi-exon	FALSE	canonical	1	14903	junction_2	170860.11150716248	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	310	639	30.0	-7874	False	AATAAA	-15
PB.8612.1	chr3	+	5374	1	intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	31	96	678	773	5.0	0	True	AATAAA	-23
PB.2089.1	chr11	+	3379	17	full-splice_match	BBS1	ENST00000318312.11	3423	17	30	14	3	0	multi-exon	FALSE	canonical	1	105535	junction_3	38441.080871362006	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	22	1803	25.0	4	True	NA	NA
PB.2089.2	chr11	+	3388	17	novel_not_in_catalog	AP002748.4	novel	3547	17	NA	NA	1561	-11	intron_retention	FALSE	canonical	1	1968	junction_10	57810.121706993006	NA	1	NA	TRUE	NA	NA	NA	A	coding	600	1803	21	1823	30.0	5	True	NA	NA
PB.2089.3	chr11	+	3319	16	full-splice_match	BBS1	ENST00000630659.2	1934	16	-7	-1378	0	-6	multi-exon	FALSE	canonical	1	14116	junction_2	53432.679475475394	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	206	1759	20.0	13	True	NA	NA
PB.484.6	chr1	-	4321	24	full-splice_match	USP33	ENST00000370794.7	4327	24	2	4	2	0	multi-exon	FALSE	canonical	1	161412	junction_23	82752.46037452789	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	260	2995	40.0	19	False	AATAAA	-17
PB.9887.1	chr6	+	2607	18	full-splice_match	C2	ENST00000299367.9	2850	18	242	1	16	0	multi-exon	FALSE	canonical	1	113892	junction_3	36895.06260616457	NA	0	NA	TRUE	NA	NA	NA	A	coding	752	2259	35	2293	15.0	2	True	AATAAA	-17
PB.484.4	chr1	-	4659	26	novel_not_in_catalog	USP33	novel	4327	24	NA	NA	-19	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_24	140567.21599614044	NA	1	1	TRUE	NA	NA	NA	C	coding	934	2805	529	3333	40.0	-2	True	AATAAA	-17
PB.484.5	chr1	-	4291	25	novel_in_catalog	USP33	novel	4327	24	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	1	57	junction_24	125284.51031516115	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	161	2965	40.0	204	False	AATAAA	-17
PB.6701.7	chr2	+	2916	3	novel_in_catalog	PAX8-AS1	novel	1207	6	NA	NA	12	-1	intron_retention	FALSE	canonical	1	4313	junction_1	2898.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	17	True	NA	NA
PB.10686.1	chr7	+	2950	1	antisense	novelGene_SLC25A13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	252	759	1	759	90.0	-45	False	NA	NA
PB.6701.5	chr2	+	3404	1	full-splice_match	PAX8-AS1	ENST00000613966.1	3231	1	-2057	1884	2	-749	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-17
PB.6701.4	chr2	+	2280	6	novel_in_catalog	PAX8-AS1	novel	1207	6	NA	NA	2	-32	combination_of_known_junctions	FALSE	canonical	1	4642	junction_2	30628.21263867678	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	340	783	40.0	-2	True	TATAAA	-21
PB.6701.3	chr2	+	2743	4	novel_in_catalog	PAX8-AS1	novel	1207	6	NA	NA	0	17	no_combination_of_known_junctions	FALSE	canonical	1	720	junction_1	4016.904363644555	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	NA	NA
PB.6701.2	chr2	+	1926	3	incomplete-splice_match	PAX8-AS1	ENST00000437551.5	2390	4	-6	569	-6	16	3prime_fragment	FALSE	canonical	1	10109	junction_2	2770.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-19	True	NA	NA
PB.3271.10	chr13	+	2299	8	novel_in_catalog	LAMP1	novel	2699	9	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	43370	junction_3	1067511.2855913888	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	197	1291	0.0	0	True	AATAAA	-19
PB.9787.13	chr6	+	2067	7	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	29	-7475	intron_retention	FALSE	canonical	1	20040	junction_1	75819.39684686382	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	510	1274	10.0	0	True	NA	NA
PB.8181.1	chr3	-	4813	10	full-splice_match	DCP1A	ENST00000610213.5	5994	10	52	1129	-15	-1129	multi-exon	TRUE	canonical	1	7386	junction_2	70905.15476638102	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	42	1790	100.0	-16	False	NA	NA
PB.9787.10	chr6	+	2571	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	16	6826	16	-6826	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	461	1858	20.0	-3415	False	AGTAAA	-13
PB.11301.4	chr8	+	2517	4	novel_not_in_catalog	PKHD1L1	novel	13076	78	NA	NA	-11	2350	any annotated donor/acceptor	FALSE	canonical	1	11696	junction_3	20863.992224777012	NA	2	NA	TRUE	NA	NA	NA	B	coding	32	99	383	481	25.0	-7	True	AATAAA	-10
PB.4605.1	chr16	+	1710	15	full-splice_match	CTU2	ENST00000453996.6	1751	15	31	10	11	0	multi-exon	TRUE	canonical	1	125217	junction_1	37721.90394322695	NA	0	NA	TRUE	NA	NA	NA	A	coding	515	1548	38	1585	65.0	-9	True	AATAAA	-14
PB.11301.6	chr8	+	5029	4	novel_not_in_catalog	PKHD1L1	novel	13076	78	NA	NA	0	4873	any annotated donor/acceptor	FALSE	canonical	1	11696	junction_3	20863.992224777012	NA	3	NA	TRUE	NA	NA	NA	B	coding	32	99	372	470	60.0	4	True	NA	NA
PB.11301.1	chr8	+	3067	4	incomplete-splice_match	PKHD1L1	ENST00000526472.1	3686	24	42261	-2416	-11	2346	5prime_fragment	FALSE	canonical	1	25903	junction_3	14712.095635904492	NA	2	NA	TRUE	NA	NA	NA	B	coding	32	99	383	481	40.0	-7	True	AATAAA	-6
PB.11301.2	chr8	+	2282	3	novel_not_in_catalog	PKHD1L1	novel	13076	78	NA	NA	-17	2346	any annotated donor/acceptor	FALSE	canonical	1	2584	junction_2	29667.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-13	True	AATAAA	-6
PB.11301.3	chr8	+	2566	2	incomplete-splice_match	PKHD1L1	ENST00000534623.1	466	3	-20	1317	-20	-1317	3prime_fragment	FALSE	canonical	1	61918	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-16	True	AATAAA	-28
PB.4586.8	chr16	+	3383	15	novel_in_catalog	USP10	novel	3009	14	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	1	25851	junction_1	185155.59613641887	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	748	2547	15.0	-6	True	AATAAA	-17
PB.4586.9	chr16	+	3263	13	novel_in_catalog	USP10	novel	3009	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	8460	junction_12	179377.25529691373	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	96	2426	15.0	-4	True	AATAAA	-18
PB.28.2	chr1	-	4131	10	novel_not_in_catalog	SLC35E2B	novel	2156	7	NA	NA	-44	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	132185.17090229574	NA	49	2	TRUE	NA	NA	NA	C	coding	405	1218	472	1689	5.0	-6302	False	AATAAA	-13
PB.4586.1	chr16	+	2208	12	incomplete-splice_match	USP10	ENST00000219473.11	3009	14	6	6938	-2	4368	3prime_fragment	FALSE	canonical	1	115799	junction_8	167042.14681128328	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2100	108	2207	45.0	-16	True	NA	NA
PB.4586.2	chr16	+	2935	13	novel_in_catalog	USP10	novel	3009	14	NA	NA	-5	-18	combination_of_known_junctions	FALSE	canonical	1	20579	junction_2	186656.42898845518	NA	2	NA	TRUE	NA	NA	NA	C	coding	599	1800	655	2454	80.0	-27	True	GATAAA	-39
PB.4586.3	chr16	+	3169	14	full-splice_match	USP10	ENST00000219473.11	3009	14	-3	-157	-3	157	multi-exon	FALSE	canonical	1	53900	junction_12	171164.41693945866	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	117	2513	20.0	-25	True	ATTAAA	-15
PB.4586.4	chr16	+	3045	15	novel_in_catalog	USP10	novel	3009	14	NA	NA	-1	-18	combination_of_known_junctions	FALSE	canonical	1	25851	junction_1	185155.59613641887	NA	6	NA	TRUE	NA	NA	NA	C	coding	599	1800	765	2564	80.0	-23	True	GATAAA	-39
PB.4586.5	chr16	+	3468	15	full-splice_match	USP10	ENST00000570191.5	2717	15	-25	-726	1	-2	multi-exon	FALSE	canonical	1	7552	junction_2	188151.72794529688	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	222	2630	10.0	-21	True	AATAAA	-19
PB.4586.6	chr16	+	1883	12	full-splice_match	USP10	ENST00000563048.5	1315	12	-20	-548	-2	-18	multi-exon	FALSE	canonical	1	23103	junction_2	178960.82573130284	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	320	1402	80.0	-16	True	GATAAA	-39
PB.4586.7	chr16	+	2976	14	full-splice_match	USP10	ENST00000219473.11	3009	14	15	18	-2	-18	multi-exon	FALSE	canonical	1	53900	junction_12	171164.41693945866	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	99	2495	80.0	-7	True	GATAAA	-39
PB.6831.5	chr2	-	2336	10	novel_in_catalog	METTL8	novel	8132	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	5586	junction_4	47358.786041853156	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	153	1415	100.0	-33	True	NA	NA
PB.3879.20	chr15	-	3198	4	full-splice_match	ARPP19	ENST00000566423.5	5362	4	55	2109	-17	373	multi-exon	FALSE	canonical	1	239423	junction_3	154353.61531885155	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	80	418	45.0	-2	True	AATAAA	-34
PB.3879.23	chr15	-	2766	3	full-splice_match	ARPP19	ENST00000563277.5	955	3	53	-1864	-2	24	multi-exon	FALSE	canonical	1	43258	junction_2	121505.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	96	291	45	335	25.0	-11	True	ATTAAA	-22
PB.3879.22	chr15	-	3122	3	full-splice_match	ARPP19	ENST00000567830.1	275	3	1	-2848	1	366	multi-exon	FALSE	canonical	1	2981	junction_2	141643.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	36	False	AATAAA	-27
PB.3879.25	chr15	-	2862	4	full-splice_match	ARPP19	ENST00000566423.5	5362	4	36	2464	6	18	multi-exon	FALSE	canonical	1	239423	junction_3	154353.61531885155	NA	4	NA	TRUE	NA	NA	NA	C	coding	112	339	99	437	20.0	-1	True	AATAAA	-42
PB.2095.2	chr11	+	2100	17	novel_not_in_catalog	C11orf80	novel	583	4	NA	NA	-6	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	75288.167837815	NA	1	NA	TRUE	NA	NA	NA	B	coding	629	1890	126	2015	15.0	-22	True	AATAAA	-15
PB.2095.1	chr11	+	2039	16	novel_not_in_catalog	C11orf80	novel	583	4	NA	NA	2	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	81977.35598116239	NA	0	NA	TRUE	NA	NA	NA	B	coding	601	1806	146	1951	10.0	-42	True	AATAAA	-18
PB.6831.2	chr2	-	2323	10	novel_in_catalog	METTL8	novel	8132	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	13188	junction_8	42554.75306989228	NA	5	NA	TRUE	NA	NA	NA	C	coding	357	1074	329	1402	100.0	692	False	NA	NA
PB.3879.28	chr15	-	2005	3	full-splice_match	ARPP19	ENST00000561650.5	3245	3	-22	1262	-22	472	multi-exon	FALSE	canonical	1	6414	junction_2	139927.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	348	False	AATAAA	-22
PB.3445.5	chr14	-	1400	5	full-splice_match	CNIH1	ENST00000216416.8	4793	5	24	3369	-16	7	multi-exon	FALSE	canonical	1	1139064	junction_4	191054.38831259543	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	81	515	20.0	-68	False	AATAAA	-19
PB.3445.4	chr14	-	3118	5	full-splice_match	CNIH1	ENST00000216416.8	4793	5	56	1619	1	-1619	multi-exon	FALSE	canonical	1	1139064	junction_4	191054.38831259543	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	49	483	40.0	-36	True	AATAAA	-17
PB.3445.3	chr14	-	4613	4	full-splice_match	CNIH1	ENST00000557659.5	856	4	10	-3767	-9	-2	multi-exon	FALSE	canonical	1	64114	junction_2	626801.4945871354	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-27	True	AATAAA	-16
PB.6831.8	chr2	-	2195	9	novel_in_catalog	METTL8	novel	8132	10	NA	NA	11	0	no_combination_of_known_junctions	FALSE	canonical	1	10888	junction_8	43334.361370157225	NA	5	NA	TRUE	NA	NA	NA	C	coding	357	1074	201	1274	100.0	696	False	NA	NA
PB.3445.1	chr14	-	4726	5	full-splice_match	CNIH1	ENST00000216416.8	4793	5	66	1	-8	-1	multi-exon	FALSE	canonical	1	1139064	junction_4	191054.38831259543	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	39	473	15.0	-26	True	AATAAA	-17
PB.6353.3	chr2	-	3610	21	novel_not_in_catalog	ADCY3	novel	5050	21	NA	NA	-9155	0	any annotated donor/acceptor	FALSE	canonical	1	22683	junction_20	85753.2389653009	NA	0	NA	TRUE	NA	NA	NA	B	coding	903	2712	139	2850	35.0	-2	True	ATTAAA	-17
PB.2804.1	chr12	-	3955	4	full-splice_match	UBE2N	ENST00000318066.6	5186	4	299	932	-20	-932	multi-exon	FALSE	canonical	1	542744	junction_1	181029.99664205438	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	80	538	30.0	-17	True	NA	NA
PB.3390.3	chr14	+	2682	11	novel_not_in_catalog	BRMS1L	novel	2657	10	NA	NA	-46	-1	any annotated donor/acceptor	FALSE	canonical	1	1174	junction_1	63492.136373018664	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	250	1197	20.0	-8	True	AATAAA	-19
PB.2804.3	chr12	-	2066	3	full-splice_match	UBE2N	ENST00000552442.1	607	3	-27	-1432	-19	2	multi-exon	FALSE	canonical	1	7410	junction_1	483044.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	105	318	79	396	30.0	-16	True	ATTAAA	-19
PB.2804.2	chr12	-	2161	4	full-splice_match	UBE2N	ENST00000318066.6	5186	4	346	2679	-18	2	multi-exon	FALSE	canonical	1	542744	junction_1	181029.99664205438	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	33	491	30.0	30	True	ATTAAA	-19
PB.2804.5	chr12	-	2003	4	full-splice_match	UBE2N	ENST00000318066.6	5186	4	2	3181	2	-500	multi-exon	FALSE	canonical	1	542744	junction_1	181029.99664205438	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	377	835	15.0	-3	True	AAGAAA	-7
PB.2804.4	chr12	-	2115	4	full-splice_match	UBE2N	ENST00000549490.1	676	4	-49	-1390	-4	-2	multi-exon	FALSE	canonical	1	26004	junction_2	387343.78537963174	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	ATTAAA	-15
PB.2804.7	chr12	-	1208	4	full-splice_match	UBE2N	ENST00000318066.6	5186	4	309	3669	-10	383	multi-exon	FALSE	canonical	1	542744	junction_1	181029.99664205438	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	70	528	15.0	-7	True	AGTAAA	-17
PB.2804.6	chr12	-	1366	3	novel_in_catalog	UBE2N	novel	5186	4	NA	NA	3	384	intron_retention	FALSE	canonical	1	542744	junction_1	215377.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	49	507	15.0	14	True	AGTAAA	-18
PB.5398.1	chr18	-	2787	13	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	-1	-4	combination_of_known_junctions	TRUE	canonical	1	15107	junction_10	78960.39930595308	NA	13	1	TRUE	NA	NA	NA	C	coding	396	1191	627	1817	25.0	0	True	AATAAA	-25
PB.5398.2	chr18	-	2977	14	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	1	15107	junction_11	75308.79224654406	NA	3	NA	TRUE	NA	NA	NA	C	coding	340	1023	656	1678	35.0	0	True	AATAAA	-21
PB.5398.3	chr18	-	2472	11	full-splice_match	MPPE1	ENST00000588072.5	4236	11	907	857	-1	-8	multi-exon	FALSE	canonical	1	18	junction_9	83040.16163911292	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	316	1506	35.0	0	True	AATAAA	-21
PB.5398.4	chr18	-	2879	13	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	1	13284	junction_10	77694.19762882876	NA	3	NA	TRUE	NA	NA	NA	C	coding	340	1023	562	1584	40.0	-1	True	AATAAA	-17
PB.5398.5	chr18	-	2120	11	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	0	-175	combination_of_known_junctions	FALSE	canonical	1	18	junction_9	86147.87203315008	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	347	1540	50.0	-2	True	NA	NA
PB.5398.6	chr18	-	1967	11	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	-10	6	combination_of_known_junctions	FALSE	canonical	1	18	junction_9	86147.87203315008	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	376	1569	30.0	-31	False	AATAAA	-27
PB.5398.7	chr18	-	2239	13	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	6	5	combination_of_known_junctions	FALSE	canonical	1	15107	junction_10	78960.39930595308	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	652	1842	25.0	4	True	AATAAA	-26
PB.5638.9	chr19	+	4261	19	novel_in_catalog	SAFB	novel	2708	19	NA	NA	5	-2	intron_retention	FALSE	canonical	1	347611	junction_13	319313.2125065016	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	2191	3675	25.0	-27	True	AATAAA	-24
PB.5638.8	chr19	+	2537	20	novel_in_catalog	SAFB	novel	2708	19	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	35444	junction_6	354309.9533392836	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	960	2351	25.0	-36	True	AATAAA	-25
PB.137.1	chr1	+	3304	3	incomplete-splice_match	MINOS1	ENST00000498642.5	669	5	-49	-24	1	5	intron_retention	FALSE	canonical	1	1271101	junction_2	379513.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	91	276	55	330	60.0	-23	True	NA	NA
PB.5638.3	chr19	+	4002	20	novel_in_catalog	SAFB	novel	2708	19	NA	NA	-2	0	intron_retention	FALSE	canonical	1	229764	junction_17	328787.45634339366	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	2214	3815	25.0	-50	True	AATAAA	-26
PB.10143.21	chr6	-	1748	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	-3	2722	1	248	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	90	1094	15.0	-22	True	TATAAA	-16
PB.5638.7	chr19	+	4365	19	novel_in_catalog	SAFB	novel	2708	19	NA	NA	-5	-47	intron_retention	FALSE	canonical	1	347611	junction_12	327638.22370298445	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	2546	4237	0.0	-37	True	AATACA	-13
PB.5638.6	chr19	+	3017	21	full-splice_match	SAFB	ENST00000588852.1	2842	21	-25	-150	7	-2	multi-exon	FALSE	canonical	1	347611	junction_14	313679.5503562314	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2754	79	2832	25.0	-3	True	AATAAA	-24
PB.5638.4	chr19	+	1620	11	incomplete-splice_match	SAFB	ENST00000588852.1	2842	21	-71	14936	-1	-30	3prime_fragment	FALSE	canonical	1	526565	junction_4	267065.0131294064	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1494	125	1618	50.0	-49	True	AAGAAA	-27
PB.28.8	chr1	-	2203	5	full-splice_match	SLC35E2B	ENST00000481276.1	2199	5	-19	15	0	-15	multi-exon	FALSE	canonical	1	23888	junction_2	112280.16397248225	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	428	1138	80.0	-6258	False	NA	NA
PB.8937.1	chr4	-	1904	5	full-splice_match	PITX2	ENST00000394598.6	1906	5	-1	3	-1	0	multi-exon	FALSE	canonical	1	17007	junction_2	22943.13328645414	NA	11	2	TRUE	NA	NA	NA	C	coding	317	954	252	1205	20.0	-11	True	AGTAAA	-14
PB.10105.15	chr6	-	1629	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	-327	2988	-327	-2988	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	652	1563	50.0	-1	True	ATTAAA	-22
PB.10105.14	chr6	-	1484	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	99	2707	99	-2707	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	2	1	TRUE	NA	NA	NA	C	coding	318	957	181	1137	35.0	425	False	GATAAA	-20
PB.10105.16	chr6	-	2476	4	novel_in_catalog	UBE2J1	novel	4290	8	NA	NA	70	-9889	intron_retention	FALSE	canonical	1	652326	junction_3	219945.81266656466	NA	2	NA	TRUE	NA	NA	NA	C	coding	110	333	210	542	85.0	-1	True	NA	NA
PB.10105.11	chr6	-	2717	7	novel_in_catalog	UBE2J1	novel	4290	8	NA	NA	7	-1446	no_combination_of_known_junctions	FALSE	canonical	1	24731	junction_1	425868.482694449	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	273	1109	30.0	-12	True	AATAAA	-18
PB.10105.10	chr6	-	2609	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	235	1446	235	-1446	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	45	1001	30.0	561	False	AATAAA	-18
PB.10105.13	chr6	-	1800	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	124	2366	124	-2366	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	156	1112	65.0	-3	True	NA	NA
PB.787.2	chr1	-	3093	13	full-splice_match	SHC1	ENST00000368453.8	3062	13	-19	-12	0	12	multi-exon	TRUE	canonical	1	212717	junction_12	420310.13869207836	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	152	1576	25.0	-20	True	ATTAAA	-29
PB.9929.1	chr6	-	829	5	full-splice_match	CUTA	ENST00000440279.7	822	5	-5	-2	5	0	multi-exon	TRUE	canonical	1	2984672	junction_4	529668.7474299385	NA	0	NA	TRUE	NA	NA	NA	A	coding	156	471	259	729	0.0	3	True	AATAAA	-16
PB.8255.19	chr3	-	7421	1	novel_in_catalog	CLDND1	novel	2161	5	NA	NA	0	-24	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	117	354	1508	1861	75.0	-7	True	NA	NA
PB.9299.13	chr5	+	3175	15	full-splice_match	POLK	ENST00000241436.8	5911	15	135	2601	0	376	multi-exon	FALSE	canonical	1	15478	junction_1	50516.86104052542	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	38	2650	35.0	0	True	AATAAA	-28
PB.5207.11	chr17	-	2093	6	full-splice_match	SLC16A6	ENST00000580666.5	2659	6	141	425	-9	0	multi-exon	FALSE	canonical	1	40422	junction_5	23007.778536834016	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	48	1619	70.0	1	True	AATAAA	-42
PB.5207.10	chr17	-	2640	7	novel_not_in_catalog	SLC16A6	novel	3807	7	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	291	junction_6	44416.94351133235	NA	8	NA	TRUE	NA	NA	NA	C	coding	523	1572	173	1744	15.0	-1	True	AATAAA	-16
PB.5207.12	chr17	-	1956	6	full-splice_match	SLC16A6	ENST00000580666.5	2659	6	137	566	-13	-141	multi-exon	FALSE	canonical	1	40422	junction_5	23007.778536834016	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	52	1623	35.0	-3	True	ATTAAA	-18
PB.6482.3	chr2	+	2420	1	novel_in_catalog	REL	novel	11255	11	NA	NA	23	-16985	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.6482.2	chr2	+	2433	10	full-splice_match	REL	ENST00000394479.3	2398	10	24	-59	24	59	multi-exon	FALSE	canonical	1	103318	junction_9	24057.054562994894	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	162	1925	95.0	1	True	NA	NA
PB.6482.1	chr2	+	2499	9	novel_in_catalog	REL	novel	11255	11	NA	NA	24	59	no_combination_of_known_junctions	TRUE	canonical	1	4503	junction_8	50795.195683253354	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	297	1991	95.0	-1	True	NA	NA
PB.383.10	chr1	-	1543	7	incomplete-splice_match	PIK3R3	ENST00000262741.9	5609	10	13	15730	13	6080	3prime_fragment	FALSE	canonical	1	141073	junction_1	28316.61997494679	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	864	678	1541	70.0	-1	True	NA	NA
PB.383.11	chr1	-	2488	3	incomplete-splice_match	PIK3R3	ENST00000425892.2	753	6	270	9976	-1	-9976	internal_fragment	FALSE	canonical	1	149434	junction_2	21650.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	692	1009	85.0	-15	True	NA	NA
PB.10688.1	chr7	-	2197	1	novel_in_catalog	SEM1	novel	699	5	NA	NA	-3	-1446	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	104	315	1278	1592	75.0	11	True	NA	NA
PB.6032.2	chr19	+	2214	13	novel_not_in_catalog	TMEM145	novel	558	5	NA	NA	12	1	intron_retention	TRUE	canonical	1	7183	junction_10	28442.98366164121	NA	0	NA	TRUE	NA	NA	NA	B	coding	311	936	30	965	15.0	-5	True	AATAAA	-23
PB.8430.18	chr3	-	3194	23	novel_not_in_catalog	COPB2	novel	433	4	NA	NA	-8	4	any annotated donor/acceptor	FALSE	canonical	1	231	junction_18	448587.9332610353	NA	1	NA	TRUE	NA	NA	NA	C	coding	937	2814	107	2920	15.0	-14	True	CATAAA	-17
PB.11514.6	chr9	+	1723	13	full-splice_match	IL11RA	ENST00000441545.6	1700	13	-22	-1	8	1	multi-exon	FALSE	canonical	1	48345	junction_1	45114.155870521645	NA	2	NA	TRUE	NA	NA	NA	A	coding	422	1269	65	1333	45.0	-15	True	AATAAA	-23
PB.6032.1	chr19	+	2701	12	novel_in_catalog	TMEM145	novel	558	5	NA	NA	12	0	intron_retention	FALSE	canonical	1	7183	junction_10	28223.678048085505	NA	0	NA	TRUE	NA	NA	NA	B	coding	311	936	30	965	20.0	-5	True	AATAAA	-22
PB.11514.1	chr9	+	3666	1	novel_in_catalog	GALT	novel	1280	9	NA	NA	-16	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	179	540	2910	3449	90.0	-7298	False	NA	NA
PB.11514.2	chr9	+	3481	1	novel_in_catalog	GALT	novel	1280	9	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	179	540	2891	3430	70.0	1	True	NA	NA
PB.8430.19	chr3	-	3195	21	novel_in_catalog	COPB2	novel	433	4	NA	NA	-11	4	intron_retention	FALSE	canonical	1	930352	junction_20	249081.44026070568	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	110	2491	15.0	-17	True	CATAAA	-17
PB.9355.10	chr5	+	4564	31	novel_in_catalog	CAST	novel	864	12	NA	NA	-5	0	intron_retention	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	192	2501	25.0	-52	True	ATTAAA	-18
PB.2836.1	chr12	-	7061	21	full-splice_match	GNPTAB	ENST00000299314.11	5701	21	104	-1464	9	1464	multi-exon	FALSE	canonical	1	236301	junction_20	58583.376665633565	NA	0	NA	TRUE	NA	NA	NA	C	coding	1256	3771	160	3930	30.0	23	True	AAAAAG	-37
PB.2836.6	chr12	-	5556	21	novel_not_in_catalog	GNPTAB	novel	5701	21	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	canonical	1	7106	junction_20	88091.09173185447	NA	1	NA	TRUE	NA	NA	NA	C	coding	1184	3555	336	3890	25.0	-4	True	CATAAA	-21
PB.2836.4	chr12	-	5532	21	full-splice_match	GNPTAB	ENST00000299314.11	5701	21	167	2	47	-2	multi-exon	FALSE	canonical	1	236301	junction_20	58583.376665633565	NA	2	NA	TRUE	NA	NA	NA	C	coding	1256	3771	97	3867	25.0	208	False	CATAAA	-20
PB.2836.5	chr12	-	5682	22	novel_not_in_catalog	GNPTAB	novel	5701	21	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	3059	junction_4	106630.68886176147	NA	1	NA	TRUE	NA	NA	NA	C	coding	1159	3480	184	3663	25.0	-1	True	CATAAA	-21
PB.5343.4	chr17	+	2756	3	novel_in_catalog	SLC16A3	novel	1033	4	NA	NA	-3	0	intron_retention	FALSE	canonical	1	780041	junction_1	378030.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	1160	2251	25.0	0	True	AATAAA	-28
PB.5343.5	chr17	+	2490	4	novel_in_catalog	SLC16A3	novel	1033	4	NA	NA	-3	1	intron_retention	FALSE	canonical	1	780041	junction_1	420069.8697621623	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	892	1986	25.0	0	True	AATAAA	-27
PB.1409.7	chr10	-	2060	6	novel_in_catalog	SGMS1	novel	3634	10	NA	NA	33	-1337	combination_of_known_junctions	FALSE	canonical	1	48896	junction_5	83382.49542296033	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	614	1855	30.0	-3	True	AATAAA	-15
PB.1409.6	chr10	-	2433	11	full-splice_match	SGMS1	ENST00000361781.6	3744	11	-24	1335	-24	-1335	multi-exon	FALSE	canonical	1	91932	junction_10	55590.777667613176	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	985	2226	25.0	-5	True	AATAAA	-17
PB.1409.1	chr10	-	3410	6	novel_in_catalog	SGMS1	novel	3634	10	NA	NA	33	-1	combination_of_known_junctions	FALSE	canonical	1	48896	junction_5	83382.49542296033	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	614	1855	20.0	-3	True	AATAAA	-33
PB.5343.1	chr17	+	2849	4	full-splice_match	SLC16A3	ENST00000584689.5	1033	4	18	-1834	-6	-1	multi-exon	FALSE	canonical	1	66664	junction_1	771851.8263013094	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	142	1608	25.0	-33	True	AATAAA	-25
PB.1409.3	chr10	-	3612	11	full-splice_match	SGMS1	ENST00000361781.6	3744	11	21	111	15	-111	multi-exon	FALSE	canonical	1	91932	junction_10	55590.777667613176	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	940	2181	35.0	-40	True	AATAAA	-26
PB.5343.3	chr17	+	2809	4	incomplete-splice_match	SLC16A3	ENST00000582743.5	2002	5	10	-9	-3	7	intron_retention	FALSE	canonical	1	780041	junction_1	436845.0285675942	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	92	1558	15.0	0	True	AATAAA	-35
PB.1409.8	chr10	-	2618	7	incomplete-splice_match	SGMS1	ENST00000619438.4	1680	8	9	1110	9	-248	3prime_fragment	FALSE	canonical	1	91932	junction_6	37641.93790028469	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	946	1572	15.0	1817	False	AATAAA	-18
PB.1850.1	chr11	+	2336	1	novel_in_catalog	SPTY2D1OS	novel	493	4	NA	NA	-4669	-4311	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	157	474	1358	1831	80.0	-7857	False	NA	NA
PB.6008.1	chr19	-	2308	14	novel_in_catalog	COQ8B	novel	2443	15	NA	NA	2	0	intron_retention	FALSE	canonical	1	15107	junction_13	81527.1251194872	NA	0	NA	TRUE	NA	NA	NA	B	coding	359	1080	724	1803	5.0	2	True	AATAAA	-17
PB.6008.3	chr19	-	2288	15	novel_not_in_catalog	COQ8B	novel	2443	15	NA	NA	14	0	any annotated donor/acceptor	FALSE	canonical	1	9062	junction_14	79831.87757712953	NA	0	NA	TRUE	NA	NA	NA	B	coding	544	1635	149	1783	5.0	61	True	AATAAA	-17
PB.1414.18	chr10	-	1943	7	novel_not_in_catalog	ZWINT	novel	1872	9	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	34427	junction_1	361552.5886858954	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	727	1200	20.0	-29	False	NA	NA
PB.7036.6	chr2	-	2022	18	novel_not_in_catalog	FARSB	novel	3369	17	NA	NA	252	-1209	any annotated donor/acceptor	FALSE	canonical	1	9988	junction_3	276638.3080727423	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	13	1896	15.0	6	True	AATAAA	-16
PB.6008.4	chr19	-	2190	15	novel_in_catalog	COQ8B	novel	2443	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	22426	junction_14	77238.55227468855	NA	0	NA	TRUE	NA	NA	NA	B	coding	544	1635	51	1685	5.0	15	True	AATAAA	-17
PB.8827.38	chr4	-	2601	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-2	14	combination_of_known_junctions	FALSE	canonical	1	84195	junction_10	434606.21458837885	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	197	1546	15.0	-75	True	AGTAAA	-16
PB.8827.39	chr4	-	2538	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	69621	junction_10	438019.4761726469	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	152	1501	45.0	11	True	TATAAA	-25
PB.1414.13	chr10	-	1592	8	novel_in_catalog	ZWINT	novel	1872	9	NA	NA	-2	1	no_combination_of_known_junctions	FALSE	canonical	1	6072	junction_4	302669.64125991915	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	33	809	15.0	-10	True	NA	NA
PB.1414.12	chr10	-	1807	8	novel_in_catalog	ZWINT	novel	1872	9	NA	NA	3	3	intron_retention	FALSE	canonical	1	48991	junction_2	330052.06215290906	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	35	820	15.0	-12	True	NA	NA
PB.1414.11	chr10	-	1650	9	full-splice_match	ZWINT	ENST00000373944.7	1872	9	12	210	2	0	multi-exon	FALSE	canonical	1	731231	junction_7	131234.88042699432	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	28	861	10.0	-5	True	NA	NA
PB.1414.10	chr10	-	1806	8	novel_in_catalog	ZWINT	novel	1872	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	733061	junction_3	123196.68764547336	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	544	1017	10.0	-10	True	NA	NA
PB.1414.17	chr10	-	2140	6	novel_in_catalog	ZWINT	novel	1872	9	NA	NA	4	-1	intron_retention	FALSE	canonical	1	733061	junction_2	131996.7107202297	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	695	1168	20.0	3	True	NA	NA
PB.1414.16	chr10	-	1624	9	novel_not_in_catalog	ZWINT	novel	1872	9	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	324247.66981272877	NA	2	NA	TRUE	NA	NA	NA	C	coding	277	834	29	862	15.0	-6	True	NA	NA
PB.1414.15	chr10	-	1827	7	novel_in_catalog	ZWINT	novel	1872	9	NA	NA	1	1	intron_retention	FALSE	canonical	1	110120	junction_3	334626.6608889176	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	712	1044	15.0	-14	True	NA	NA
PB.1414.14	chr10	-	1512	9	full-splice_match	ZWINT	ENST00000361148.6	807	9	-6	-699	1	1	multi-exon	FALSE	canonical	1	110120	junction_3	291979.7591646712	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	37	729	15.0	-14	True	NA	NA
PB.3344.1	chr14	+	2901	8	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10039	-839	intron_retention	FALSE	canonical	1	33686	junction_6	252408.9624605437	NA	2	NA	TRUE	NA	NA	NA	B	coding	221	666	84	749	25.0	-36	True	AATAAA	-17
PB.3344.3	chr14	+	1579	9	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10048	-839	no_combination_of_known_junctions	FALSE	canonical	1	19733	junction_2	222785.97850540184	NA	1	NA	TRUE	NA	NA	NA	B	coding	348	1047	166	1212	25.0	-27	True	AATAAA	-17
PB.3344.2	chr14	+	2457	9	full-splice_match	IRF9	ENST00000396864.7	1838	9	212	-831	-8	831	multi-exon	FALSE	canonical	1	493528	junction_6	122725.07593066504	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	76	1257	80.0	-28	True	NA	NA
PB.2440.1	chr12	+	4880	6	full-splice_match	EMG1	ENST00000599672.5	4898	6	18	0	-2	0	multi-exon	FALSE	canonical	1	788463	junction_5	185053.6681123614	NA	2	NA	TRUE	NA	NA	NA	A	coding	244	735	14	748	15.0	-2	True	AATAAA	-21
PB.3344.4	chr14	+	1650	9	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10048	-839	no_combination_of_known_junctions	FALSE	canonical	1	15470	junction_6	241539.0766977468	NA	2	NA	TRUE	NA	NA	NA	B	coding	402	1209	75	1283	25.0	-27	True	AATAAA	-17
PB.3344.7	chr14	+	2981	7	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10060	-839	intron_retention	FALSE	canonical	1	572930	junction_5	117977.30269797191	NA	1	NA	TRUE	NA	NA	NA	B	coding	221	666	63	728	25.0	-15	True	AATAAA	-17
PB.3344.6	chr14	+	1747	10	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10051	-839	no_combination_of_known_junctions	FALSE	canonical	1	29710	junction_8	283308.88447199366	NA	1	NA	TRUE	NA	NA	NA	B	coding	455	1368	72	1439	25.0	-24	True	AATAAA	-17
PB.3344.9	chr14	+	1596	9	full-splice_match	IRF9	ENST00000396864.7	1838	9	240	2	0	-2	multi-exon	FALSE	canonical	1	493528	junction_6	122725.07593066504	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	48	1229	25.0	0	True	AATAAA	-17
PB.3344.8	chr14	+	2082	8	full-splice_match	IRF9	ENST00000561415.1	1769	8	-4	-309	-4	-2	multi-exon	FALSE	canonical	1	572930	junction_5	115724.94616414336	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	55	720	25.0	-7	True	AATAAA	-17
PB.1073.9	chr1	+	6963	23	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	209	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	102574.51228995791	NA	10	3	TRUE	NA	NA	NA	C	coding	519	1560	639	2198	15.0	NA	False	AATAAA	-26
PB.8589.20	chr3	+	5512	6	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	87733	junction_1	209925.66193336152	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	333	1205	15.0	0	True	AATAAA	-18
PB.7527.10	chr21	+	2902	15	novel_in_catalog	MX2	novel	3042	14	NA	NA	1	-285	no_combination_of_known_junctions	FALSE	canonical	1	127	junction_1	89282.9366261938	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	330	2477	35.0	0	True	NA	NA
PB.4086.11	chr15	-	5539	12	novel_in_catalog	PRC1	novel	3034	15	NA	NA	14	5	intron_retention	FALSE	canonical	1	169718	junction_1	201711.80521646707	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	1393	2595	40.0	-3	True	NA	NA
PB.7527.12	chr21	+	2275	5	novel_in_catalog	MX2	novel	3042	14	NA	NA	1	3744	combination_of_known_junctions	FALSE	canonical	1	280	junction_1	103917.98528015976	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	166	762	100.0	0	True	NA	NA
PB.7527.13	chr21	+	3465	15	novel_in_catalog	MX2	novel	3042	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	280	junction_1	89248.5370463761	NA	7	NA	TRUE	NA	NA	NA	C	coding	715	2148	164	2311	40.0	2	True	AATAAA	-11
PB.7527.14	chr21	+	2790	15	novel_in_catalog	MX2	novel	3042	14	NA	NA	0	-286	combination_of_known_junctions	FALSE	canonical	1	7030	junction_1	86248.70705673902	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	219	2366	30.0	2	True	NA	NA
PB.7527.15	chr21	+	3490	14	novel_in_catalog	MX2	novel	3042	14	NA	NA	-137	-9	combination_of_known_junctions	FALSE	canonical	1	47603	junction_1	64707.72578549922	NA	2	NA	TRUE	NA	NA	NA	C	coding	715	2148	642	2789	40.0	-17	True	AATAAA	-16
PB.7527.16	chr21	+	3360	14	novel_in_catalog	MX2	novel	3042	14	NA	NA	-285	-287	combination_of_known_junctions	FALSE	canonical	1	47603	junction_1	64707.72578549922	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	790	2937	25.0	-7695	False	NA	NA
PB.1073.7	chr1	+	5019	20	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	196	0	intron_retention	FALSE	non_canonical	0	0	junction_1	105972.10788016391	NA	4	1	TRUE	NA	NA	NA	C	coding	519	1560	652	2211	20.0	NA	False	AATAAA	-24
PB.7527.18	chr21	+	2493	12	incomplete-splice_match	MX2	ENST00000330714.7	3042	14	15961	1	7390	-1	5prime_fragment	FALSE	canonical	1	145783	junction_1	47358.440369150114	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	225	1784	25.0	281	False	AATAAA	-24
PB.2450.4	chr12	+	2509	8	full-splice_match	NECAP1	ENST00000339754.10	2593	8	60	24	0	-6	multi-exon	FALSE	canonical	1	166578	junction_7	67112.50535375015	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	19	846	60.0	-6	True	TATAAA	-33
PB.2450.2	chr12	+	4915	5	full-splice_match	NECAP1	ENST00000544891.6	4899	5	-25	9	0	1	multi-exon	FALSE	canonical	1	166578	junction_4	37003.40148131655	NA	5	NA	TRUE	NA	NA	NA	C	coding	120	363	35	397	35.0	3	True	ATTAAA	-7
PB.2450.3	chr12	+	2449	7	full-splice_match	NECAP1	ENST00000450991.6	2446	7	0	-3	0	1	multi-exon	FALSE	canonical	1	14423	junction_3	110854.30408636473	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	366	767	15.0	-9	True	ATTAAA	-17
PB.2450.1	chr12	+	2613	7	full-splice_match	NECAP1	ENST00000639071.1	2578	7	-20	-15	-1	-6	multi-exon	FALSE	canonical	1	166578	junction_6	49296.74741693299	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	36	614	60.0	2	True	TATAAA	-33
PB.1073.5	chr1	+	4287	20	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	195	1	intron_retention	FALSE	non_canonical	0	0	junction_1	105459.9006753744	NA	4	1	TRUE	NA	NA	NA	C	coding	519	1560	653	2212	20.0	NA	False	AATAAA	-25
PB.3156.2	chr13	+	4131	4	novel_not_in_catalog	NUDT15	novel	2098	3	NA	NA	159	6964	any annotated donor/acceptor	FALSE	canonical	1	1452	junction_3	108847.40842523026	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	22	516	20.0	0	True	NA	NA
PB.3156.1	chr13	+	1871	3	full-splice_match	NUDT15	ENST00000258662.2	2098	3	151	76	151	-76	multi-exon	FALSE	canonical	1	196030	junction_2	30285.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	30	524	30.0	-8	True	NA	NA
PB.7372.5	chr20	+	3992	1	novel_in_catalog	RAE1	novel	2639	12	NA	NA	-13	-1282	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-16	True	NA	NA
PB.1810.7	chr11	+	2796	15	novel_in_catalog	ZNF143	novel	555	6	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	5458	junction_2	57690.86669040253	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	66	1886	25.0	7	True	AATACA	-18
PB.4086.14	chr15	-	2489	15	novel_not_in_catalog	PRC1	novel	3034	15	NA	NA	16	5	any annotated donor/acceptor	FALSE	canonical	1	3287	junction_2	268333.7204478268	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	170	1858	40.0	-1	True	NA	NA
PB.8349.4	chr3	-	3091	6	full-splice_match	HSPBAP1	ENST00000465044.5	2986	6	-105	0	5	0	multi-exon	FALSE	canonical	1	2186	junction_1	23277.23556095096	NA	2	NA	TRUE	NA	NA	NA	C	coding	280	843	140	982	70.0	-23	True	AATAGA	-40
PB.8349.1	chr3	-	1945	8	full-splice_match	HSPBAP1	ENST00000306103.2	1953	8	12	-4	12	4	multi-exon	FALSE	canonical	1	50807	junction_7	32795.81296010644	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	133	1599	25.0	-16	True	NA	NA
PB.1810.5	chr11	+	2328	16	full-splice_match	ZNF143	ENST00000396602.6	2947	16	47	572	0	0	multi-exon	FALSE	canonical	1	120244	junction_2	33363.93621861785	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	73	1989	65.0	0	True	AGTAAA	-41
PB.8349.3	chr3	-	3291	5	incomplete-splice_match	HSPBAP1	ENST00000306103.2	1953	8	-7	12858	-7	0	3prime_fragment	FALSE	canonical	1	50807	junction_4	6469.208201163416	NA	3	NA	TRUE	NA	NA	NA	C	coding	251	756	152	907	70.0	-35	True	AATAGA	-40
PB.8349.2	chr3	-	1710	8	full-splice_match	HSPBAP1	ENST00000306103.2	1953	8	-9	252	-9	-252	multi-exon	FALSE	canonical	1	50807	junction_7	32795.81296010644	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	154	1620	30.0	-37	True	AATAAA	-20
PB.1810.4	chr11	+	2898	16	full-splice_match	ZNF143	ENST00000396602.6	2947	16	47	2	0	-2	multi-exon	FALSE	canonical	1	120244	junction_2	33363.93621861785	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	73	1989	25.0	0	True	AATACA	-17
PB.10353.28	chr7	+	4660	22	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	1	5	intron_retention	FALSE	canonical	1	22052	junction_13	203789.87152674908	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1350	1735	3084	35.0	1	True	AATAAA	-27
PB.4257.1	chr16	+	1854	14	novel_in_catalog	SNX29	novel	540	6	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	9082	junction_13	33432.277114388344	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	74	1699	10.0	0	True	NA	NA
PB.504.25	chr1	-	1997	14	full-splice_match	MCOLN2	ENST00000284027.5	1729	14	-1	-267	0	8	multi-exon	FALSE	canonical	1	2351	junction_13	29781.660544187773	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	114	1730	30.0	-5	True	AATAAA	-23
PB.787.3	chr1	-	3396	12	novel_in_catalog	PYGO2	novel	594	3	NA	NA	-6894	-2649	no_combination_of_known_junctions	FALSE	canonical	1	29258	junction_1	470441.03863813326	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	222	1880	25.0	-1	True	ATTAAA	-28
PB.8443.5	chr3	-	7285	41	full-splice_match	XRN1	ENST00000392981.6	5383	41	-45	-1857	-9	-12	multi-exon	FALSE	canonical	1	110988	junction_4	43183.639820075376	NA	1	NA	TRUE	NA	NA	NA	C	coding	1694	5085	94	5178	60.0	-1	True	NA	NA
PB.11595.8	chr9	-	4517	7	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-64	2940	no_combination_of_known_junctions	FALSE	canonical	1	2380	junction_1	58550.38085771375	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	86	1075	30.0	-13	True	ATTAAA	-32
PB.4257.3	chr16	+	2870	20	incomplete-splice_match	SNX29	ENST00000566228.5	8171	21	-3	48968	-2	-2076	3prime_fragment	FALSE	canonical	1	79414	junction_1	18591.837909799717	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	73	2394	90.0	1	True	NA	NA
PB.10654.2	chr7	+	3640	4	full-splice_match	STEAP1	ENST00000475789.1	1054	4	-9	-2577	-9	1	multi-exon	FALSE	canonical	1	166310	junction_3	86256.18935988819	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	129	905	10.0	0	True	AATAAA	-17
PB.6989.1	chr2	+	3206	14	incomplete-splice_match	ATIC	ENST00000236959.13	2213	16	223	1222	-32	-757	3prime_fragment	FALSE	canonical	1	815763	junction_7	208271.67812401117	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	104	1642	35.0	-41	True	AATAAA	-41
PB.4257.2	chr16	+	8162	21	full-splice_match	SNX29	ENST00000566228.5	8171	21	7	2	0	-2	multi-exon	FALSE	canonical	1	79414	junction_1	18295.6168189952	NA	11	NA	TRUE	NA	NA	NA	C	coding	813	2442	63	2504	10.0	11	True	TATAAA	-16
PB.10353.24	chr7	+	4422	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	55607	junction_8	177981.0478965106	NA	4	NA	TRUE	NA	NA	NA	B	coding	424	1275	1559	2833	10.0	0	True	AATAAA	-40
PB.3376.2	chr14	-	2088	5	full-splice_match	EGLN3	ENST00000250457.7	2709	5	4	617	4	551	multi-exon	FALSE	canonical	1	213689	junction_2	19682.92753885966	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	326	1045	5.0	-4	True	AATAAA	-16
PB.4257.5	chr16	+	7021	21	full-splice_match	SNX29	ENST00000566228.5	8171	21	15	1135	8	-1135	multi-exon	FALSE	canonical	1	79414	junction_1	18295.6168189952	NA	5	NA	TRUE	NA	NA	NA	C	coding	813	2442	55	2496	35.0	19	True	AATAAA	-13
PB.3376.1	chr14	-	2720	5	full-splice_match	EGLN3	ENST00000250457.7	2709	5	2	-13	2	13	multi-exon	FALSE	canonical	1	213689	junction_2	19682.92753885966	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	328	1047	35.0	-6	True	NA	NA
PB.3376.6	chr14	-	1408	5	full-splice_match	EGLN3	ENST00000250457.7	2709	5	4	1297	4	-17	multi-exon	FALSE	canonical	1	213689	junction_2	19682.92753885966	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	326	1045	55.0	-4	True	AATGAA	-45
PB.3376.7	chr14	-	1810	1	full-splice_match	EGLN3	ENST00000547327.2	2849	1	-40	1079	-40	-1079	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	148	447	370	816	30.0	-48	False	AATAAA	-41
PB.3376.4	chr14	-	2759	5	novel_not_in_catalog	EGLN3	novel	2709	5	NA	NA	5	549	any annotated donor/acceptor	FALSE	canonical	1	1107	junction_4	104279.58435499252	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	325	771	10.0	-3	True	AATAAA	-14
PB.3906.18	chr15	-	2317	11	incomplete-splice_match	ICE2	ENST00000558181.5	7060	16	44	28381	-3	-503	3prime_fragment	FALSE	canonical	1	66281	junction_8	61763.55123865531	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1860	458	2317	65.0	9	True	NA	NA
PB.587.3	chr1	-	4222	14	novel_in_catalog	WDR47	novel	4134	15	NA	NA	-62	0	no_combination_of_known_junctions	FALSE	canonical	1	429	junction_6	64671.53974384896	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	324	2060	25.0	-24	False	AATAAA	-16
PB.4257.7	chr16	+	5844	2	novel_not_in_catalog	SNX29	novel	8171	21	NA	NA	183100	-4	any annotated donor/acceptor	FALSE	canonical	1	1820	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	121	366	4008	4373	10.0	0	True	TATAAA	-14
PB.12081.2	chrX	+	3681	15	full-splice_match	CLCN5	ENST00000376091.7	3046	15	-37	-598	13	186	multi-exon	FALSE	canonical	1	19585	junction_4	10017.961087314063	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	370	2820	35.0	-19	True	AGTAAA	-16
PB.12081.3	chrX	+	4580	15	full-splice_match	CLCN5	ENST00000376088.7	10108	15	51	5477	1	864	multi-exon	FALSE	canonical	1	7338	junction_2	12108.853104869435	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	591	3041	60.0	-1	True	NA	NA
PB.12081.1	chrX	+	8172	15	full-splice_match	CLCN5	ENST00000376091.7	3046	15	-68	-5058	-18	-1695	multi-exon	FALSE	canonical	1	19585	junction_4	10017.961087314063	NA	7	NA	TRUE	NA	NA	NA	C	coding	816	2451	401	2851	60.0	1	True	AAGAAA	-19
PB.585.6	chr1	+	2714	14	novel_in_catalog	GPSM2	novel	7433	16	NA	NA	-9	-2	no_combination_of_known_junctions	FALSE	canonical	1	8978	junction_1	73871.46256050709	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	237	2234	30.0	9	True	TATAAA	-36
PB.12081.4	chrX	+	9793	15	full-splice_match	CLCN5	ENST00000376091.7	3046	15	1	-6748	1	-5	multi-exon	FALSE	canonical	1	19585	junction_4	10017.961087314063	NA	5	NA	TRUE	NA	NA	NA	C	coding	816	2451	332	2782	0.0	-1	True	AATAAA	-16
PB.12081.5	chrX	+	3016	15	full-splice_match	CLCN5	ENST00000376091.7	3046	15	31	-1	31	1	multi-exon	FALSE	canonical	1	19585	junction_4	10017.961087314063	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	302	2752	25.0	-5	True	AATAAA	-25
PB.3185.2	chr13	-	4759	28	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	37	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	38297.46641589418	NA	1	NA	TRUE	NA	NA	NA	B	coding	1193	3582	185	3766	40.0	-23	True	AATAAA	-21
PB.3185.3	chr13	-	4856	29	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	54	-16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	50737.72035327054	NA	2	NA	TRUE	NA	NA	NA	B	coding	1061	3186	686	3871	60.0	-6	True	AATAAA	-13
PB.1240.6	chr1	-	4793	17	novel_in_catalog	HNRNPU	novel	12852	2	NA	NA	18	-273	combination_of_known_junctions	FALSE	canonical	1	1235	junction_3	2114708.2569118873	NA	2	NA	TRUE	NA	NA	NA	C	coding	804	2415	207	2621	35.0	-5	True	AATAAA	-13
PB.3185.1	chr13	-	4735	27	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	28	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	41049.531163763524	NA	1	NA	TRUE	NA	NA	NA	B	coding	1182	3549	194	3742	40.0	-32	True	AATAAA	-21
PB.3185.6	chr13	-	3610	27	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	61	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	39025.72503638318	NA	5	NA	TRUE	NA	NA	NA	B	coding	1112	3339	161	3499	25.0	1	True	AGTAAA	-16
PB.3185.7	chr13	-	3534	27	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	30	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	39025.72503638318	NA	0	NA	TRUE	NA	NA	NA	B	coding	1112	3339	192	3530	20.0	-30	True	AATAAA	-17
PB.3185.4	chr13	-	3903	28	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	50	150	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	38297.46641589418	NA	0	NA	TRUE	NA	NA	NA	B	coding	1193	3582	172	3753	20.0	-10	True	AATAAA	-18
PB.3185.5	chr13	-	3666	28	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	46	66	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	38297.46641589418	NA	0	NA	TRUE	NA	NA	NA	B	coding	1163	3489	176	3664	55.0	-14	True	NA	NA
PB.649.9	chr1	+	4471	27	novel_in_catalog	WDR3	novel	1035	10	NA	NA	-10	-5655	combination_of_known_junctions	FALSE	canonical	1	76529	junction_1	84668.36925966058	NA	2	NA	TRUE	NA	NA	NA	C	coding	943	2832	200	3031	25.0	4	True	NA	NA
PB.3185.8	chr13	-	3186	24	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	50	26772	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	42422.731254156446	NA	1	NA	TRUE	NA	NA	NA	B	coding	1005	3015	172	3186	65.0	-10	True	AATAAA	-11
PB.3185.9	chr13	-	3051	25	novel_not_in_catalog	DIAPH3	novel	4804	28	NA	NA	-3	26772	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	39332.989243198324	NA	1	NA	TRUE	NA	NA	NA	B	coding	1016	3048	4	3051	65.0	1	True	AATAAA	-11
PB.9421.10	chr5	+	2300	11	novel_not_in_catalog	LMNB1	novel	3475	12	NA	NA	1017	-1	any annotated donor/acceptor	FALSE	canonical	1	1541	junction_1	326813.6301911075	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	415	1545	25.0	577	False	AATAAA	-19
PB.7291.2	chr20	+	6252	11	full-splice_match	PPP1R16B	ENST00000299824.5	6251	11	-8	7	-8	-7	multi-exon	FALSE	canonical	1	60585	junction_1	57321.30661944125	NA	16	NA	TRUE	NA	NA	NA	C	coding	567	1704	198	1901	35.0	0	True	ATTAAA	-18
PB.7291.3	chr20	+	2237	11	full-splice_match	PPP1R16B	ENST00000299824.5	6251	11	-26	4040	-26	-4040	multi-exon	FALSE	canonical	1	60585	junction_1	57321.30661944125	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	216	1919	40.0	-18	False	TATAAA	-18
PB.7291.1	chr20	+	6181	10	novel_in_catalog	PPP1R16B	novel	6251	11	NA	NA	-41	-7	no_combination_of_known_junctions	FALSE	canonical	1	4635	junction_4	80037.08868015542	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	724	1830	35.0	-33	False	ATTAAA	-18
PB.7291.6	chr20	+	2654	3	incomplete-splice_match	PPP1R16B	ENST00000299824.5	6251	11	-8	31223	-8	-3845	3prime_fragment	FALSE	canonical	1	60585	junction_1	41204.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	198	755	90.0	0	True	NA	NA
PB.7291.7	chr20	+	3330	1	genic	PPP1R16B	novel	NA	NA	NA	NA	-2	-86614	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	1922	2236	90.0	6	True	NA	NA
PB.7291.4	chr20	+	5949	11	full-splice_match	PPP1R16B	ENST00000299824.5	6251	11	1	301	1	-301	multi-exon	FALSE	canonical	1	60585	junction_1	57321.30661944125	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	189	1892	60.0	9	True	NA	NA
PB.7291.5	chr20	+	6136	10	novel_not_in_catalog	PPP1R16B	novel	6251	11	NA	NA	-8	1	any annotated donor/acceptor	FALSE	canonical	1	120	junction_4	81027.90998777925	NA	6	1	TRUE	NA	NA	NA	C	coding	360	1083	695	1777	20.0	0	True	ATTAAA	-26
PB.3906.11	chr15	-	3637	16	novel_not_in_catalog	ICE2	novel	7209	16	NA	NA	6	526	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	64126.550720482905	NA	14	2	TRUE	NA	NA	NA	C	coding	947	2844	286	3129	45.0	-1	True	AATAAA	-13
PB.7291.8	chr20	+	5836	9	novel_not_in_catalog	PPP1R16B	novel	6251	11	NA	NA	54845	0	any annotated donor/acceptor	FALSE	canonical	1	478	junction_1	78782.31477215794	NA	4	1	TRUE	NA	NA	NA	C	coding	399	1200	279	1478	20.0	NA	False	ATTAAA	-25
PB.6989.3	chr2	+	2086	16	full-splice_match	ATIC	ENST00000443953.5	2187	16	100	1	42	-1	multi-exon	FALSE	canonical	1	23808	junction_1	386962.06183339935	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	378	1979	20.0	91	False	AATAAA	-21
PB.7267.1	chr20	+	3422	5	incomplete-splice_match	PHF20	ENST00000374012.7	5922	18	155836	328	10639	-328	5prime_fragment	FALSE	canonical	1	189840	junction_4	28481.375133585105	NA	4	NA	TRUE	NA	NA	NA	C	coding	292	879	118	996	85.0	NA	False	NA	NA
PB.3906.10	chr15	-	3689	16	full-splice_match	ICE2	ENST00000261520.8	7209	16	3	3517	3	526	multi-exon	FALSE	canonical	1	105991	junction_3	48798.99104949701	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	233	3181	45.0	-17	True	AATAAA	-13
PB.7336.2	chr20	+	6843	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-38	13	any annotated donor/acceptor	FALSE	canonical	1	23250	junction_9	126818.91202083685	NA	3	NA	TRUE	NA	NA	NA	C	coding	1416	4251	255	4505	75.0	0	True	AATAGA	-27
PB.7336.3	chr20	+	4817	23	full-splice_match	NCOA3	ENST00000372004.7	7939	23	-21	3143	-21	115	multi-exon	FALSE	canonical	1	84210	junction_19	107384.1744725393	NA	1	NA	TRUE	NA	NA	NA	C	coding	1420	4263	238	4500	20.0	-6	True	CATAAA	-17
PB.2007.5	chr11	-	1886	11	novel_not_in_catalog	STX5	novel	1785	11	NA	NA	-5	8051	any annotated donor/acceptor	FALSE	canonical	1	321	junction_1	199860.68586255275	NA	2	1	TRUE	NA	NA	NA	C	coding	333	1002	123	1124	80.0	-6	True	NA	NA
PB.7336.6	chr20	+	2711	9	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	-21	1293	combination_of_known_junctions	FALSE	canonical	1	8374	junction_8	165356.264830479	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	238	1206	15.0	-6	True	AATAAA	-13
PB.7336.7	chr20	+	4822	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-15	117	any annotated donor/acceptor	FALSE	canonical	1	122263	junction_19	102846.95524849709	NA	1	NA	TRUE	NA	NA	NA	C	coding	1423	4272	232	4503	25.0	0	True	CATAAA	-19
PB.7336.4	chr20	+	6847	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-21	25	any annotated donor/acceptor	FALSE	canonical	1	72415	junction_19	108869.34225875209	NA	3	NA	TRUE	NA	NA	NA	C	coding	1419	4260	238	4497	90.0	-6	True	AATAGA	-39
PB.7336.5	chr20	+	2895	9	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	-21	1477	combination_of_known_junctions	FALSE	canonical	1	8374	junction_8	165356.264830479	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	238	1206	35.0	-6	True	ATTAAA	-13
PB.7336.8	chr20	+	6841	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-15	13	any annotated donor/acceptor	FALSE	canonical	1	122263	junction_19	102846.95524849709	NA	2	NA	TRUE	NA	NA	NA	C	coding	1423	4272	232	4503	75.0	0	True	AATAGA	-27
PB.7336.9	chr20	+	6774	22	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-15	25	any annotated donor/acceptor	FALSE	canonical	1	8401	junction_1	124138.74690649466	NA	2	NA	TRUE	NA	NA	NA	C	coding	1423	4272	153	4424	90.0	0	True	AATAGA	-39
PB.7386.9	chr20	+	1934	5	incomplete-splice_match	NELFCD	ENST00000482747.1	1701	6	-16	0	7	0	intron_retention	FALSE	canonical	1	483042	junction_1	171798.68869842982	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	25	630	90.0	-6	True	NA	NA
PB.649.6	chr1	+	3283	1	novel_in_catalog	WDR3	novel	1035	10	NA	NA	-18	-5497	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-4	True	NA	NA
PB.6942.14	chr2	+	1923	10	novel_in_catalog	CFLAR	novel	14672	10	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	1	17483	junction_1	227948.4919575657	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	330	1772	10.0	0	True	NA	NA
PB.6942.15	chr2	+	907	5	full-splice_match	CFLAR	ENST00000440180.5	1198	5	285	6	-78	-2	multi-exon	FALSE	canonical	1	320669	junction_4	186194.65032728517	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	79	744	10.0	13	True	NA	NA
PB.6942.16	chr2	+	1675	9	incomplete-splice_match	CFLAR	ENST00000423241.6	2128	10	11272	8	-103	-8	5prime_fragment	FALSE	canonical	1	286833	junction_8	166053.11955497102	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	104	1546	60.0	-3202	False	NA	NA
PB.6942.17	chr2	+	1851	4	full-splice_match	CFLAR	ENST00000461422.1	717	4	-199	-935	-88	-2	multi-exon	FALSE	canonical	1	685598	junction_3	51491.4994602669	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	89	730	10.0	3	True	NA	NA
PB.6942.10	chr2	+	3923	7	novel_not_in_catalog	CFLAR	novel	14672	10	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	17483	junction_1	316160.29951856175	NA	2	NA	TRUE	NA	NA	NA	C	coding	250	753	330	1082	5.0	0	True	NA	NA
PB.5598.8	chr19	+	2347	13	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	-8	-15	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	288614.77178887266	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	158	1870	65.0	3	True	ATTAAA	-1
PB.6942.12	chr2	+	1836	9	incomplete-splice_match	CFLAR	ENST00000423241.6	2128	10	11287	-168	-88	-1	5prime_fragment	FALSE	canonical	1	286833	junction_8	166053.11955497102	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	89	1531	85.0	3	True	NA	NA
PB.6942.13	chr2	+	2077	10	novel_in_catalog	CFLAR	novel	14672	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	17483	junction_1	227948.4919575657	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	330	1772	85.0	0	True	NA	NA
PB.31.20	chr1	-	1497	12	novel_in_catalog	GNB1	novel	3145	11	NA	NA	-24	1241	no_combination_of_known_junctions	FALSE	canonical	1	19047	junction_11	1245552.4148316581	NA	7	NA	TRUE	NA	NA	NA	C	coding	340	1023	158	1180	35.0	1328	False	AATAAA	-24
PB.11253.4	chr8	+	2172	5	full-splice_match	SDC2	ENST00000302190.8	3759	5	453	1134	-9	472	multi-exon	FALSE	canonical	1	703003	junction_1	98841.16545593491	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	556	1074	30.0	-9	False	AATAAA	-26
PB.504.21	chr1	-	2354	11	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	1334	junction_5	34364.62431338367	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	240	1577	80.0	-3	True	NA	NA
PB.7005.3	chr2	+	2813	9	full-splice_match	PNKD	ENST00000258362.7	2991	9	176	2	176	-2	multi-exon	FALSE	canonical	1	104237	junction_1	60694.90392104081	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	49	1005	40.0	0	True	NA	NA
PB.11038.9	chr8	-	3168	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	10	608	combination_of_known_junctions	FALSE	canonical	1	86000	junction_2	94016.9585070147	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	227	1690	20.0	9	True	TATAAA	-19
PB.2428.1	chr12	+	2487	5	full-splice_match	GPR162	ENST00000311268.7	2768	5	280	1	-4	-1	multi-exon	FALSE	canonical	1	92970	junction_1	61929.02995516319	NA	0	NA	TRUE	NA	NA	NA	A	coding	588	1767	508	2274	25.0	-21	True	ATTAAA	-19
PB.7118.9	chr2	+	3225	9	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	14014	junction_7	82115.33384733557	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	159	1217	10.0	0	True	AGTAAA	-17
PB.6998.22	chr2	-	2268	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-22	3969	-22	2684	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	4	NA	TRUE	NA	NA	NA	C	coding	272	819	773	1591	65.0	-1	True	TATAAA	-26
PB.6998.23	chr2	-	1934	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-22	4303	-22	2350	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	773	1591	50.0	-1	True	AATAGA	-7
PB.6998.20	chr2	-	2808	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-24	3431	-24	3222	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	775	1593	20.0	-3	True	AATAAA	-35
PB.6998.21	chr2	-	2601	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-24	3638	-24	3015	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	775	1593	0.0	-3	True	TATAAA	-20
PB.1240.5	chr1	-	3054	17	novel_in_catalog	HNRNPU	novel	12852	2	NA	NA	-2	126	combination_of_known_junctions	FALSE	canonical	1	26243	junction_1	2108477.0596248196	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	234	2648	55.0	1	True	AATAAA	-19
PB.6998.24	chr2	-	1725	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-24	4514	-24	2139	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	775	1593	35.0	-3	True	AATATA	-18
PB.8357.1	chr3	+	2603	6	full-splice_match	UMPS	ENST00000232607.6	6738	6	53	4082	-14	434	multi-exon	FALSE	canonical	1	323039	junction_1	87025.87539668877	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	54	1496	20.0	-34	False	AATAAA	-17
PB.7827.3	chr22	-	3861	3	full-splice_match	TNFRSF13C	ENST00000291232.4	3944	3	12	71	12	-71	multi-exon	FALSE	canonical	1	6865	junction_2	47620.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	184	555	34	588	30.0	-1	True	NA	NA
PB.10155.10	chr6	-	2622	9	novel_in_catalog	WASF1	novel	2675	9	NA	NA	-48	-1	no_combination_of_known_junctions	FALSE	canonical	1	3763	junction_8	124324.21582141338	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	241	1920	15.0	-37	False	AATAAA	-18
PB.276.1	chr1	+	4302	11	novel_in_catalog	ZMYM1	novel	4608	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1080	junction_1	31368.410020273583	NA	2	NA	TRUE	NA	NA	NA	C	coding	1193	3582	124	3705	25.0	-23	False	NA	NA
PB.6944.12	chr2	+	2674	9	novel_in_catalog	CASP8	novel	1630	9	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	4976	junction_1	97971.97607575086	NA	6	NA	TRUE	NA	NA	NA	C	coding	479	1440	121	1560	15.0	0	True	AATAAA	-16
PB.6944.13	chr2	+	2655	8	novel_in_catalog	CASP8	novel	1630	9	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	21636	junction_1	113862.03664765101	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	147	1541	15.0	0	True	AATAAA	-16
PB.6944.10	chr2	+	2936	9	full-splice_match	CASP8	ENST00000358485.8	2930	9	-9	3	-9	-1	multi-exon	FALSE	canonical	1	24310	junction_1	92412.40804946054	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	206	1822	15.0	-8	True	AATAAA	-16
PB.6944.11	chr2	+	2614	8	novel_in_catalog	CASP8	novel	1630	9	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	1	24310	junction_1	113201.26282161415	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	56	1501	15.0	-2260	False	AATAAA	-15
PB.276.9	chr1	+	4077	10	novel_not_in_catalog	ZMYM1	novel	4608	13	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	1594	junction_1	41608.19154392024	NA	4	NA	TRUE	NA	NA	NA	C	coding	951	2856	625	3480	25.0	1	True	NA	NA
PB.276.8	chr1	+	2769	9	full-splice_match	ZMYM1	ENST00000373329.5	3980	9	-5	1216	0	2	multi-exon	FALSE	canonical	1	1594	junction_1	31509.79107728858	NA	1	NA	TRUE	NA	NA	NA	C	coding	861	2583	187	2769	70.0	0	True	TTTAAA	-22
PB.8081.10	chr3	+	4101	17	novel_in_catalog	DHX30	novel	4065	22	NA	NA	-13	0	intron_retention	FALSE	canonical	1	253553	junction_1	153953.61179760398	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	47	2449	20.0	0	True	AATAAA	-20
PB.8081.11	chr3	+	3989	18	novel_in_catalog	DHX30	novel	4065	22	NA	NA	-13	0	intron_retention	FALSE	canonical	1	253553	junction_1	149383.40997708088	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	47	2449	20.0	0	True	AATAAA	-20
PB.8081.13	chr3	+	3655	18	novel_in_catalog	DHX30	novel	4065	22	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	13272	junction_2	207878.02220421558	NA	0	NA	TRUE	NA	NA	NA	C	coding	1178	3537	47	3583	20.0	0	True	AATAAA	-20
PB.8081.14	chr3	+	1840	5	incomplete-splice_match	DHX30	ENST00000457607.1	3748	19	-11	7506	-11	2	3prime_fragment	FALSE	canonical	1	253553	junction_1	180906.31534357087	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	45	914	25.0	2	True	NA	NA
PB.8383.6	chr3	+	2679	18	novel_in_catalog	ACAD9	novel	553	2	NA	NA	-8	-4	intron_retention	FALSE	canonical	1	2493	junction_1	109830.70279767466	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	694	2190	25.0	18	True	TATAAA	-6
PB.7293.1	chr20	+	3297	21	novel_in_catalog	DHX35	novel	3287	21	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	9586	junction_16	36673.64776576636	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	604	2118	10.0	-56	False	AGTAAA	-35
PB.9971.1	chr6	-	3856	7	novel_not_in_catalog	BTBD9	novel	8486	10	NA	NA	-49	5628	any annotated donor/acceptor	FALSE	canonical	1	1875	junction_1	36814.78865890717	NA	0	NA	TRUE	NA	NA	NA	A	coding	387	1164	202	1365	25.0	-45	False	AATAAA	-13
PB.242.4	chr1	+	1680	8	full-splice_match	ZCCHC17	ENST00000373714.5	1730	8	25	25	-3	-25	multi-exon	FALSE	canonical	1	27536	junction_1	192286.3644863768	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	237	962	30.0	1	True	NA	NA
PB.7293.3	chr20	+	4800	21	novel_in_catalog	DHX35	novel	3287	21	NA	NA	4	-1	intron_retention	FALSE	canonical	1	17202	junction_4	30390.607825609542	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	569	1780	10.0	-21	True	AGTAAA	-33
PB.7118.1	chr2	+	2304	8	full-splice_match	D2HGDH	ENST00000400769.6	2277	8	-28	1	0	-1	multi-exon	FALSE	canonical	1	6417	junction_6	85683.63300763896	NA	3	NA	TRUE	NA	NA	NA	C	coding	320	963	187	1149	10.0	-7819	False	AGTAAA	-16
PB.242.2	chr1	+	1603	8	full-splice_match	ZCCHC17	ENST00000344147.9	1605	8	5	-3	2	3	multi-exon	FALSE	canonical	1	427215	junction_6	83752.80730549287	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	132	857	25.0	-32	True	ACTAAA	-26
PB.7293.5	chr20	+	3364	22	novel_not_in_catalog	DHX35	novel	3287	21	NA	NA	2	1	any annotated donor/acceptor	FALSE	canonical	1	852	junction_17	33161.183837039396	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	23	2185	10.0	-14	True	AGTAAA	-35
PB.1075.1	chr1	+	3621	6	full-splice_match	RASSF5	ENST00000579436.6	2064	6	-2	-1555	-2	0	multi-exon	FALSE	canonical	1	21620	junction_1	159320.27705901093	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	76	1332	50.0	-3	True	AATAAA	-11
PB.9296.3	chr5	-	5950	13	novel_in_catalog	FAM169A	novel	5954	12	NA	NA	8	-165	combination_of_known_junctions	FALSE	canonical	1	21498	junction_12	26140.200641471536	NA	1	NA	TRUE	NA	NA	NA	B	coding	670	2013	219	2231	15.0	7	True	ATTAAA	-20
PB.9296.2	chr5	-	5959	12	novel_in_catalog	FAM169A	novel	5954	12	NA	NA	10	-25	no_combination_of_known_junctions	TRUE	canonical	1	3442	junction_9	34246.02164045259	NA	3	NA	TRUE	NA	NA	NA	B	coding	542	1629	472	2100	75.0	52	True	NA	NA
PB.9296.1	chr5	-	6088	13	novel_in_catalog	FAM169A	novel	5954	12	NA	NA	10	-25	combination_of_known_junctions	FALSE	canonical	1	21498	junction_12	26140.200641471536	NA	1	NA	TRUE	NA	NA	NA	B	coding	670	2013	217	2229	75.0	9	True	NA	NA
PB.242.1	chr1	+	2173	8	full-splice_match	ZCCHC17	ENST00000344147.9	1605	8	0	-568	0	551	multi-exon	FALSE	canonical	1	427215	junction_6	83752.80730549287	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	137	862	30.0	-37	True	ATTAAA	-19
PB.7037.2	chr2	+	3264	18	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-42	14	any annotated donor/acceptor	FALSE	canonical	1	2934	junction_2	352918.27274755016	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	553	2682	25.0	2	True	AATAAA	-40
PB.9296.4	chr5	-	4035	13	novel_in_catalog	FAM169A	novel	5954	12	NA	NA	-14	-2059	combination_of_known_junctions	FALSE	canonical	1	21498	junction_12	26140.200641471536	NA	0	NA	TRUE	NA	NA	NA	B	coding	670	2013	198	2210	70.0	28	True	ATTAAA	-43
PB.10729.5	chr7	-	3032	12	novel_not_in_catalog	AC069281.2	novel	4401	16	NA	NA	-7429	-2428	intron_retention	FALSE	canonical	0	0	junction_4	198121.63505435636	NA	23	3	TRUE	NA	NA	NA	B	coding	368	1107	30	1136	0.0	-1	True	TATAAA	-15
PB.7269.3	chr20	+	3651	20	novel_in_catalog	EPB41L1	novel	3514	20	NA	NA	-56	4	combination_of_known_junctions	FALSE	canonical	1	28418	junction_1	104840.72778190418	NA	1	NA	TRUE	NA	NA	NA	B	coding	807	2424	221	2644	45.0	-26	True	AATAAA	-31
PB.849.18	chr1	-	2850	14	full-splice_match	DCAF8	ENST00000368074.5	3824	14	-48	1022	-18	-184	multi-exon	FALSE	canonical	1	58706	junction_13	238553.6729915334	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	202	1995	45.0	-1	True	ATTAAA	-18
PB.10729.6	chr7	-	2555	18	full-splice_match	LRCH4	ENST00000310300.10	2552	18	-3	0	-3	0	multi-exon	FALSE	canonical	1	306592	junction_1	131320.55632637456	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	57	2108	0.0	-28	True	TATAAA	-15
PB.10729.1	chr7	-	3620	17	novel_in_catalog	AC069281.2	novel	4401	16	NA	NA	-7474	-1781	intron_retention	FALSE	canonical	1	364037	junction_16	122629.34405135193	NA	1	NA	TRUE	NA	NA	NA	B	coding	723	2172	75	2246	25.0	13	False	AATAAA	-37
PB.7118.6	chr2	+	3485	11	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	52479	junction_8	73958.78292677618	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	160	1332	10.0	-1	True	AGTAAA	-17
PB.10729.3	chr7	-	2428	17	novel_in_catalog	AC069281.2	novel	4401	16	NA	NA	-7483	-1781	intron_retention	FALSE	canonical	1	165881	junction_1	145096.04270356367	NA	0	NA	TRUE	NA	NA	NA	B	coding	544	1635	555	2189	25.0	4	True	AATAAA	-37
PB.7269.2	chr20	+	3888	21	novel_not_in_catalog	EPB41L1	novel	3514	20	NA	NA	-98	11	any annotated donor/acceptor	FALSE	canonical	1	35019	junction_1	112706.40364659854	NA	0	NA	TRUE	NA	NA	NA	B	coding	868	2607	268	2874	25.0	-68	True	AATAAA	-38
PB.7118.7	chr2	+	2607	11	novel_not_in_catalog	D2HGDH	novel	2617	10	NA	NA	-1	0	any annotated donor/acceptor	TRUE	canonical	1	3021	junction_9	90502.63254784359	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	160	1767	10.0	-1	True	AGTAAA	-17
PB.7269.1	chr20	+	3476	20	novel_in_catalog	EPB41L1	novel	3514	20	NA	NA	-104	4	combination_of_known_junctions	FALSE	canonical	1	35019	junction_1	106720.56557866136	NA	1	NA	TRUE	NA	NA	NA	B	coding	731	2196	274	2469	45.0	-74	True	AATAAA	-31
PB.4909.17	chr17	-	4547	5	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-268	intron_retention	FALSE	canonical	1	4214	junction_4	59731.178689922905	NA	3	NA	TRUE	NA	NA	NA	C	coding	901	2706	59	2764	20.0	0	True	AATAAA	-20
PB.4909.16	chr17	-	5411	6	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	-1	-267	intron_retention	FALSE	canonical	1	59128	junction_5	36280.49732073693	NA	2	NA	TRUE	NA	NA	NA	C	coding	901	2706	922	3627	20.0	-1	True	AATAAA	-21
PB.4909.15	chr17	-	4914	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	-1	-267	intron_retention	FALSE	canonical	1	1554	junction_5	53073.61089850167	NA	2	NA	TRUE	NA	NA	NA	C	coding	901	2706	425	3130	20.0	-1	True	AATAAA	-21
PB.4909.14	chr17	-	4874	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-266	intron_retention	FALSE	canonical	1	59128	junction_6	37390.06595972013	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	384	3089	20.0	-2	True	AATAAA	-22
PB.4909.13	chr17	-	4659	5	full-splice_match	SLFN11	ENST00000308377.8	4910	5	-15	266	0	-266	multi-exon	FALSE	canonical	1	11939	junction_4	56394.621168600825	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	169	2874	20.0	-2	True	AATAAA	-22
PB.4909.12	chr17	-	4897	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	30	-266	intron_retention	FALSE	canonical	1	9687	junction_5	50740.453810435014	NA	4	NA	TRUE	NA	NA	NA	C	coding	901	2706	407	3112	20.0	4026	False	AATAAA	-22
PB.4909.11	chr17	-	4825	6	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	24	-266	intron_retention	FALSE	canonical	1	9989	junction_5	52519.06838625377	NA	2	NA	TRUE	NA	NA	NA	C	coding	901	2706	335	3040	20.0	4020	False	AATAAA	-22
PB.4909.10	chr17	-	4937	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	-1	-266	intron_retention	FALSE	canonical	1	5713	junction_5	51871.481275038466	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	447	3152	20.0	-3	True	AATAAA	-22
PB.7837.4	chr22	-	2675	6	novel_in_catalog	RRP7A	novel	3801	7	NA	NA	8	-967	intron_retention	FALSE	canonical	1	7668	junction_5	351530.5346017043	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	386	700	30.0	7	True	NA	NA
PB.1350.1	chr10	-	2652	9	novel_not_in_catalog	MTPAP	novel	5601	9	NA	NA	-61	186	any annotated donor/acceptor	FALSE	canonical	1	3793	junction_8	88697.7625249786	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	314	1867	20.0	239	False	AATAAA	-22
PB.1350.2	chr10	-	2591	9	full-splice_match	MTPAP	ENST00000263063.8	5601	9	-19	3029	-19	180	multi-exon	FALSE	canonical	1	174082	junction_6	45880.00833679496	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	64	1812	40.0	-61	False	AATAAA	-16
PB.7837.7	chr22	-	2413	7	full-splice_match	RRP7A	ENST00000323013.6	3801	7	-1	1389	-1	-1389	multi-exon	FALSE	canonical	1	9975	junction_2	291903.20223858266	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	18	860	60.0	-10	True	NA	NA
PB.848.2	chr1	+	2383	4	full-splice_match	PEA15	ENST00000368077.5	1021	4	-24	-1338	19	-3	multi-exon	FALSE	canonical	1	62178	junction_2	1416363.6148073778	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	170	496	35.0	-9914	False	AATAAA	-22
PB.7837.1	chr22	-	3798	7	full-splice_match	RRP7A	ENST00000323013.6	3801	7	-12	15	-12	-15	multi-exon	FALSE	canonical	1	9975	junction_2	291903.20223858266	NA	4	NA	TRUE	NA	NA	NA	C	coding	280	843	29	871	90.0	6	False	NA	NA
PB.4909.19	chr17	-	2605	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-939	intron_retention	FALSE	canonical	1	59128	junction_6	37390.06595972013	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2223	382	2604	60.0	0	True	NA	NA
PB.4909.18	chr17	-	2240	1	incomplete-splice_match	SLFN11	ENST00000308377.8	4910	5	20795	268	319	-268	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	113	342	116	457	20.0	-6024	False	AATAAA	-20
PB.7289.20	chr20	+	7515	31	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	-34	-167	combination_of_known_junctions	FALSE	canonical	1	10350	junction_30	64205.74822241386	NA	0	NA	TRUE	NA	NA	NA	C	coding	1496	4491	235	4725	10.0	19	True	AGTAAA	-17
PB.6385.4	chr2	+	2105	12	incomplete-splice_match	SLC4A1AP	ENST00000618046.4	2544	14	0	6235	0	-6232	3prime_fragment	FALSE	canonical	1	20317	junction_11	138869.4777388269	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2079	27	2105	60.0	0	True	AATGAA	-25
PB.8647.6	chr4	+	2284	11	novel_in_catalog	TMEM175	novel	525	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	97415	junction_3	115462.29907116867	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	963	2126	15.0	-2	True	NA	NA
PB.8234.1	chr3	-	3803	3	novel_not_in_catalog	ENPP7P2	novel	943	3	NA	NA	-89145	-39238	any annotated donor/acceptor	FALSE	canonical	1	79	junction_1	209.5	NA	2	1	TRUE	NA	NA	NA	A	coding	138	417	1249	1665	70.0	NA	False	NA	NA
PB.10735.4	chr7	+	3036	12	novel_in_catalog	SLC12A9	novel	262	2	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	14404	junction_2	118671.6509344339	NA	3	1	TRUE	NA	NA	NA	B	coding	825	2478	155	2632	20.0	-27	True	AATAAA	-14
PB.10735.2	chr7	+	3315	14	novel_in_catalog	SLC12A9	novel	262	2	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	32951	junction_1	102826.93202106102	NA	2	NA	TRUE	NA	NA	NA	B	coding	914	2745	166	2910	15.0	-38	True	AATAAA	-15
PB.10735.3	chr7	+	3090	13	novel_in_catalog	SLC12A9	novel	262	2	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	1171	junction_1	110022.79699841377	NA	2	NA	TRUE	NA	NA	NA	B	coding	840	2523	165	2687	20.0	-38	True	AATAAA	-13
PB.10735.1	chr7	+	2611	11	novel_not_in_catalog	SLC12A9	novel	262	2	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	126863.9932690123	NA	15	1	TRUE	NA	NA	NA	B	coding	680	2043	165	2207	20.0	-41	True	AATAAA	-14
PB.960.4	chr1	+	2027	6	full-splice_match	TOR3A	ENST00000367627.7	2724	6	690	7	-3	-7	multi-exon	FALSE	canonical	1	269824	junction_2	152719.68753451534	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	63	1256	25.0	-3	True	ATTAAA	-13
PB.367.1	chr1	+	2274	14	novel_in_catalog	PLK3	novel	2492	15	NA	NA	-77	-2	combination_of_known_junctions	TRUE	canonical	1	59551	junction_12	60471.39909863791	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	154	1689	20.0	-8274	False	AATAAA	-12
PB.367.2	chr1	+	2375	15	full-splice_match	PLK3	ENST00000372201.4	2492	15	121	-4	-42	4	multi-exon	FALSE	canonical	1	139321	junction_13	46617.81527446654	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	119	2059	20.0	-8239	False	AATAAA	-18
PB.367.3	chr1	+	2576	14	novel_in_catalog	PLK3	novel	2492	15	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	139321	junction_12	48294.76493393118	NA	13	NA	TRUE	NA	NA	NA	C	coding	403	1212	87	1298	20.0	1	True	AATAAA	-12
PB.10389.4	chr7	+	3766	16	full-splice_match	USP42	ENST00000479544.6	4286	16	0	520	0	-520	multi-exon	FALSE	canonical	1	51561	junction_1	29480.962460091654	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3699	68	3766	85.0	26	True	NA	NA
PB.1177.1	chr1	-	1872	2	full-splice_match	MRPL55	ENST00000465268.1	848	2	-1031	7	0	-6	multi-exon	FALSE	canonical	1	1007994	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	135	408	2	409	10.0	-8	True	NA	NA
PB.6428.2	chr2	-	2312	7	full-splice_match	SRSF7	ENST00000446327.6	2453	7	133	8	2	-6	multi-exon	FALSE	canonical	1	381799	junction_1	981245.881937077	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	106	786	45.0	-1	True	AATAAA	-15
PB.9079.11	chr4	-	1773	6	full-splice_match	DCTD	ENST00000357067.7	1931	6	1	157	0	-6	multi-exon	FALSE	canonical	1	250137	junction_5	291217.3845106092	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	99	635	30.0	0	True	ATTAAA	-21
PB.10767.3	chr7	+	2022	13	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	8	88	intron_retention	FALSE	canonical	1	243514	junction_1	103047.36018004725	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1569	453	2021	60.0	-7	True	AATGAA	-9
PB.6428.1	chr2	-	2454	9	novel_not_in_catalog	SRSF7	novel	2489	8	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	92687	junction_5	1187615.9693868584	NA	3	NA	TRUE	NA	NA	NA	C	coding	137	414	103	516	45.0	2	True	AATAAA	-17
PB.9241.2	chr5	-	3891	10	novel_in_catalog	ELOVL7	novel	3994	9	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	4553	junction_9	45845.09208192301	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	215	1060	20.0	338	False	AATAAA	-17
PB.1051.6	chr1	+	3250	14	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-51	-279	intron_retention	FALSE	canonical	1	19678	junction_6	77460.53299630081	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1266	1984	3249	70.0	-20	False	AAAACA	-24
PB.9241.1	chr5	-	3984	9	full-splice_match	ELOVL7	ENST00000508821.5	3994	9	8	2	8	0	multi-exon	FALSE	canonical	1	25624	junction_8	36833.57610930549	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	308	1153	20.0	206	False	AATAAA	-17
PB.6428.7	chr2	-	2918	7	full-splice_match	SRSF7	ENST00000443213.5	1903	7	-9	-1006	2	-311	multi-exon	FALSE	canonical	1	2207138	junction_6	352283.41599705705	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	65.0	-1	True	NA	NA
PB.8533.10	chr3	-	2909	8	incomplete-splice_match	GNB4	ENST00000232564.7	6434	10	107	15293	-7	-1057	3prime_fragment	FALSE	canonical	1	130618	junction_7	58673.90799971639	NA	5	NA	TRUE	NA	NA	NA	C	coding	236	711	181	891	30.0	-14	True	AATAAA	-22
PB.11241.9	chr8	-	5537	24	full-splice_match	VIRMA	ENST00000297591.9	6528	24	51	940	51	-18	multi-exon	FALSE	canonical	1	184214	junction_21	72054.82321754147	NA	0	NA	TRUE	NA	NA	NA	C	coding	1812	5439	26	5464	35.0	-6	True	AATAAA	-20
PB.6428.5	chr2	-	2346	8	full-splice_match	SRSF7	ENST00000313117.10	2489	8	134	9	-2	-7	multi-exon	FALSE	canonical	1	2207138	junction_7	326225.6787759301	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	105	821	45.0	0	True	AATAAA	-14
PB.11241.5	chr8	-	5704	25	novel_not_in_catalog	VIRMA	novel	6528	24	NA	NA	51	0	any annotated donor/acceptor	FALSE	canonical	1	4850	junction_23	103054.76086324977	NA	2	NA	TRUE	NA	NA	NA	C	coding	1477	4434	1086	5519	20.0	-6	True	AATAAA	-19
PB.6428.4	chr2	-	3222	7	full-splice_match	SRSF7	ENST00000443213.5	1903	7	-9	-1310	2	-7	multi-exon	FALSE	canonical	1	2207138	junction_6	352283.41599705705	NA	2	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	45.0	-1	True	AATAAA	-14
PB.11241.1	chr8	-	5520	22	novel_in_catalog	VIRMA	novel	6528	24	NA	NA	51	6	no_combination_of_known_junctions	TRUE	canonical	1	4527	junction_20	91488.33387931822	NA	0	NA	TRUE	NA	NA	NA	C	coding	1477	4434	895	5328	15.0	-6	True	AATAAA	-26
PB.9299.5	chr5	+	2513	15	novel_in_catalog	POLK	novel	5911	15	NA	NA	-6	-25	combination_of_known_junctions	FALSE	canonical	1	11366	junction_11	62725.37626736609	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	44	1432	75.0	-6	True	NA	NA
PB.1051.46	chr1	+	5764	18	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	5	-2	intron_retention	FALSE	canonical	1	4080	junction_1	198947.42928814102	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	1699	4131	15.0	42	False	TTTAAA	-40
PB.8589.26	chr3	+	2086	5	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	-7332	combination_of_known_junctions	FALSE	canonical	1	18207	junction_4	267306.5202146218	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	332	1165	30.0	1	True	AATAAA	-21
PB.6423.5	chr2	-	3441	3	full-splice_match	CYP1B1	ENST00000610745.4	5250	3	-615	2424	-615	135	multi-exon	FALSE	canonical	1	290465	junction_2	36660.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	1019	2650	75.0	501	False	NA	NA
PB.7365.1	chr20	-	2909	9	novel_not_in_catalog	BCAS1	novel	6112	9	NA	NA	11524	-3	any annotated donor/acceptor	FALSE	canonical	1	7758	junction_8	133142.52882813214	NA	1	NA	TRUE	NA	NA	NA	B	coding	492	1479	53	1531	35.0	-2	True	AATAAA	-17
PB.6461.10	chr2	+	3174	22	full-splice_match	PPP1R21	ENST00000294952.12	3142	22	30	-62	30	57	multi-exon	FALSE	canonical	1	142046	junction_11	46175.87495921905	NA	3	NA	TRUE	NA	NA	NA	C	coding	780	2343	128	2470	55.0	-27	False	ATTAAA	-43
PB.6461.11	chr2	+	3284	24	novel_not_in_catalog	PPP1R21	novel	2481	21	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	4315	junction_8	88780.68819016806	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	1612	2643	25.0	6	True	AATAAA	-17
PB.8560.7	chr3	+	2903	21	full-splice_match	ABCF3	ENST00000429586.6	2624	21	166	-445	-2	440	multi-exon	FALSE	canonical	1	379104	junction_9	83556.77294467218	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	20	2149	10.0	-10	True	NA	NA
PB.6424.1	chr2	-	2889	8	novel_not_in_catalog	AC009229.2	novel	351	3	NA	NA	-63838	21424	any annotated donor/acceptor	FALSE	canonical	1	85	junction_2	3185.3050922340617	NA	0	NA	TRUE	NA	NA	NA	A	coding	136	411	2077	2487	75.0	NA	False	NA	NA
PB.377.3	chr1	+	1534	10	full-splice_match	AKR1A1	ENST00000372070.7	1818	10	283	1	-20	0	multi-exon	TRUE	canonical	1	337249	junction_2	576267.0686108639	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	465	1442	15.0	0	True	AATAAA	-16
PB.2370.7	chr11	-	4946	26	novel_in_catalog	NFRKB	novel	5093	26	NA	NA	8	-145	combination_of_known_junctions	FALSE	canonical	1	21000	junction_25	73428.79969413637	NA	1	NA	TRUE	NA	NA	NA	B	coding	1299	3900	103	4002	25.0	-20	True	NA	NA
PB.377.1	chr1	+	1435	9	full-splice_match	AKR1A1	ENST00000351829.8	1166	9	-268	-1	-5	1	multi-exon	FALSE	canonical	1	1011660	junction_1	311722.1004847256	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	364	1341	10.0	-27	True	AATAAA	-18
PB.377.6	chr1	+	2262	9	novel_in_catalog	AKR1A1	novel	1818	10	NA	NA	-8	0	intron_retention	FALSE	canonical	1	337249	junction_2	601832.8093224895	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	232	591	15.0	-6	True	AATAAA	-16
PB.10290.3	chr6	-	2622	7	novel_in_catalog	MTRF1L	novel	3214	4	NA	NA	-24	-1173	combination_of_known_junctions	FALSE	canonical	1	5133	junction_5	7363.115184636339	NA	3	NA	TRUE	NA	NA	NA	C	coding	280	843	25	867	95.0	-21	True	NA	NA
PB.2370.6	chr11	-	4963	26	novel_in_catalog	NFRKB	novel	5093	26	NA	NA	0	-145	combination_of_known_junctions	FALSE	canonical	1	21000	junction_25	77002.68613876792	NA	4	1	TRUE	NA	NA	NA	B	coding	1311	3936	84	4019	25.0	-1	True	NA	NA
PB.11889.1	chr9	-	2864	13	novel_not_in_catalog	BRD3	novel	5652	12	NA	NA	-4	520	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70606.93230419887	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	191	2371	90.0	4	True	NA	NA
PB.8589.27	chr3	+	1742	4	incomplete-splice_match	ST6GAL1	ENST00000448044.5	4302	7	0	26501	0	513	3prime_fragment	FALSE	canonical	1	87733	junction_1	237182.54333506268	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	332	1093	15.0	1	True	AATAAA	-15
PB.10401.14	chr7	+	3500	11	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-20	-24	combination_of_known_junctions	FALSE	canonical	1	7880	junction_1	99469.82448084444	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	493	3120	55.0	-4	True	AATAAA	-15
PB.5714.3	chr19	+	2662	16	novel_not_in_catalog	CARM1	novel	3330	16	NA	NA	138	-2	any annotated donor/acceptor	FALSE	canonical	1	2889	junction_1	241660.5253205873	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	357	1700	90.0	-5357	False	NA	NA
PB.6423.3	chr2	-	4437	3	full-splice_match	CYP1B1	ENST00000610745.4	5250	3	30	783	3	-783	multi-exon	FALSE	canonical	1	290465	junction_2	36660.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	374	2005	75.0	-1	True	NA	NA
PB.8938.2	chr4	+	2661	2	full-splice_match	FAM241A	ENST00000309733.5	8901	2	29	6211	29	-6211	multi-exon	FALSE	canonical	1	174672	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	156	554	50.0	8	True	AATAAA	-41
PB.8938.1	chr4	+	2526	2	full-splice_match	FAM241A	ENST00000309733.5	8901	2	8	6367	8	-6367	multi-exon	FALSE	canonical	1	174672	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	177	575	50.0	3	True	ATTAAA	-7
PB.8589.24	chr3	+	3643	6	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4178	junction_2	309559.9827557819	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	368	895	15.0	1	True	AATAAA	-18
PB.6973.6	chr2	+	3059	4	full-splice_match	CREB1	ENST00000494094.5	580	4	-149	-2330	0	-248	multi-exon	FALSE	canonical	1	213854	junction_3	113857.99899387347	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	227	595	100.0	0	True	NA	NA
PB.6942.4	chr2	+	1995	10	full-splice_match	CFLAR	ENST00000423241.6	2128	10	301	-168	128	-1	multi-exon	FALSE	canonical	1	174040	junction_1	195135.23318008697	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	248	1690	85.0	-2	True	NA	NA
PB.6973.4	chr2	+	2150	9	full-splice_match	CREB1	ENST00000432329.6	7650	9	21	5479	1	163	multi-exon	FALSE	canonical	1	93908	junction_4	124556.02006501934	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	237	1256	45.0	-10	True	AATAAA	-20
PB.6973.5	chr2	+	3530	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	4	4054	4	195	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	234	1211	35.0	-7	True	TATAAA	-3
PB.6973.2	chr2	+	1897	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	49	5642	21	0	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	189	1166	40.0	-1	True	ATTAAA	-15
PB.6973.3	chr2	+	2841	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	0	4747	0	-498	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	238	1215	65.0	-11	True	NA	NA
PB.723.2	chr1	+	4220	11	novel_not_in_catalog	RPRD2	novel	4780	11	NA	NA	-526	1	any annotated donor/acceptor	FALSE	canonical	1	19285	junction_10	84480.08009678968	NA	11	NA	TRUE	NA	NA	NA	C	coding	680	2043	592	2634	100.0	-5	True	NA	NA
PB.6973.1	chr2	+	2624	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	50	4914	22	-665	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	188	1165	50.0	0	True	AAAAAG	-15
PB.8560.1	chr3	+	3327	21	full-splice_match	ABCF3	ENST00000429586.6	2624	21	101	-804	20	799	multi-exon	TRUE	canonical	1	379104	junction_9	83556.77294467218	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	85	2214	80.0	-75	False	NA	NA
PB.723.8	chr1	+	4351	9	novel_in_catalog	RPRD2	novel	4780	11	NA	NA	-15	0	no_combination_of_known_junctions	FALSE	canonical	1	14539	junction_8	93499.43003970665	NA	0	NA	TRUE	NA	NA	NA	C	coding	1368	4107	23	4129	100.0	11	True	NA	NA
PB.6973.8	chr2	+	2024	9	novel_in_catalog	CREB1	novel	2005	8	NA	NA	0	163	combination_of_known_junctions	FALSE	canonical	1	13333	junction_1	137595.95754327232	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	111	1130	45.0	0	True	AATAAA	-20
PB.6973.9	chr2	+	3805	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	29	3754	1	-79	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	209	1186	10.0	-21	True	TATAAA	-14
PB.7829.1	chr22	+	1977	1	novel_in_catalog	WBP2NL	novel	1423	9	NA	NA	0	-2699	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.9465.1	chr5	+	2732	17	full-splice_match	TGFBI	ENST00000442011.6	2804	17	63	9	-30	5	multi-exon	TRUE	canonical	1	1535536	junction_1	787019.9515070977	NA	0	NA	TRUE	NA	NA	NA	A	coding	683	2052	99	2150	35.0	-4836	False	AATAAA	-5
PB.8589.25	chr3	+	2341	5	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	-7077	combination_of_known_junctions	FALSE	canonical	1	18207	junction_4	267306.5202146218	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	332	1165	20.0	1	True	NA	NA
PB.11403.2	chr8	+	3307	17	novel_not_in_catalog	KIFC2	novel	3566	18	NA	NA	14	0	intron_retention	FALSE	canonical	1	5835	junction_14	150957.71469474284	NA	0	NA	TRUE	NA	NA	NA	C	coding	78	237	762	998	15.0	8	True	AATAAA	-15
PB.9913.1	chr6	-	4840	3	novel_in_catalog	HLA-DPA1	novel	1704	6	NA	NA	-16	-5	intron_retention	FALSE	canonical	1	3135941	junction_1	117071.5	NA	15	NA	TRUE	NA	NA	NA	B	coding	140	423	80	502	20.0	-13	True	AATAAA	-20
PB.10981.4	chr8	+	2454	10	full-splice_match	MTMR9	ENST00000221086.7	7481	10	395	4632	-16	457	multi-exon	FALSE	canonical	1	45298	junction_9	25356.173425133216	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	79	1728	30.0	-9	True	ATTAAA	-20
PB.10981.1	chr8	+	2390	10	full-splice_match	MTMR9	ENST00000221086.7	7481	10	8	5083	8	6	multi-exon	TRUE	canonical	1	45298	junction_9	25356.173425133216	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	466	2115	15.0	1	True	AATAGA	-17
PB.10981.3	chr8	+	2652	10	full-splice_match	MTMR9	ENST00000221086.7	7481	10	381	4448	-30	641	multi-exon	FALSE	canonical	1	45298	junction_9	25356.173425133216	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	93	1742	15.0	-23	True	NA	NA
PB.10981.2	chr8	+	3482	10	full-splice_match	MTMR9	ENST00000221086.7	7481	10	362	3637	-49	-18	multi-exon	FALSE	canonical	1	45298	junction_9	25356.173425133216	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	112	1761	95.0	-42	False	NA	NA
PB.10888.4	chr7	-	3708	17	novel_in_catalog	BRAF	novel	9578	19	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	4035	junction_4	48821.17540668028	NA	7	1	TRUE	NA	NA	NA	C	coding	593	1782	221	2002	10.0	-3	True	AATAAA	-16
PB.9105.3	chr4	-	5777	18	incomplete-splice_match	FAT1	ENST00000614102.4	14758	29	106027	8	-7736	-8	5prime_fragment	FALSE	canonical	1	307069	junction_14	85292.98184765068	NA	2	NA	TRUE	NA	NA	NA	B	coding	1546	4641	348	4988	45.0	5420	False	AATAAA	-6
PB.8589.22	chr3	+	4258	7	full-splice_match	ST6GAL1	ENST00000448044.5	4302	7	43	1	43	1	multi-exon	FALSE	canonical	1	87733	junction_1	215982.24556482004	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	289	1509	10.0	0	True	AATAAA	-19
PB.5840.4	chr19	+	2178	2	novel_not_in_catalog	GDF15	novel	562	2	NA	NA	0	1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	coding	94	285	33	317	20.0	0	True	AATAAA	-17
PB.8589.19	chr3	+	3747	7	novel_not_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	296253.63023185986	NA	1	1	TRUE	NA	NA	NA	C	coding	255	768	234	1001	10.0	0	True	AATAAA	-16
PB.4770.8	chr17	-	3150	21	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	4	2	any annotated donor/acceptor	FALSE	canonical	1	5199	junction_17	55884.197137003765	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	588	2612	15.0	0	True	AATAAA	-19
PB.607.8	chr1	+	3157	5	incomplete-splice_match	CD53	ENST00000271324.5	1505	8	-6	2257	-6	-1645	intron_retention	FALSE	canonical	1	1319677	junction_1	134747.46056118276	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	119	640	75.0	0	True	NA	NA
PB.11789.1	chr9	-	3925	8	full-splice_match	HSPA5	ENST00000324460.6	3908	8	-13	-4	-13	4	multi-exon	FALSE	canonical	1	2174427	junction_2	999659.513985494	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	218	2182	15.0	-1	True	ATTAAA	-19
PB.11637.10	chr9	+	4406	6	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-4	-2	no_combination_of_known_junctions	FALSE	canonical	1	7898	junction_1	257412.64803159924	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	596	991	30.0	-30	True	AATAAA	-13
PB.11789.3	chr9	-	3549	8	full-splice_match	HSPA5	ENST00000324460.6	3908	8	-13	372	-13	-372	multi-exon	FALSE	canonical	1	2174427	junction_2	999659.513985494	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	218	2182	80.0	-1	True	NA	NA
PB.11789.4	chr9	-	3393	8	full-splice_match	HSPA5	ENST00000324460.6	3908	8	-13	528	-13	-528	multi-exon	FALSE	canonical	1	2174427	junction_2	999659.513985494	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	218	2182	55.0	-1	True	NA	NA
PB.10888.3	chr7	-	3695	19	full-splice_match	BRAF	ENST00000496384.7	9578	19	66	5817	-2	1	multi-exon	FALSE	canonical	1	23431	junction_3	45681.18854208244	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	42	2345	10.0	-37	True	AATAAA	-16
PB.11789.7	chr9	-	2410	8	novel_not_in_catalog	HSPA5	novel	3908	8	NA	NA	-13	-1386	any annotated donor/acceptor	FALSE	canonical	1	2079	junction_4	1656857.8086576152	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	879	2057	25.0	-1	True	AATAAA	-22
PB.8589.23	chr3	+	4167	6	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	834	junction_1	269884.9970766067	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	200	1420	10.0	1	True	AATAAA	-17
PB.289.1	chr1	+	3387	17	novel_in_catalog	MAP7D1	novel	959	6	NA	NA	-32	-2	intron_retention	TRUE	canonical	1	347131	junction_9	491364.256339413	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	276	2798	15.0	-39	True	AATAAA	-14
PB.8743.3	chr4	-	715	8	full-splice_match	RPL9	ENST00000295955.13	750	8	30	5	2	3	multi-exon	FALSE	canonical	1	3719	junction_5	275138.5631663895	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	30	608	20.0	3	True	AATAAA	-26
PB.8743.2	chr4	-	2207	7	novel_in_catalog	RPL9	novel	2354	8	NA	NA	0	-4	intron_retention	FALSE	canonical	1	3719	junction_4	117251.19732579848	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	60	566	25.0	-27	True	AATAAA	-27
PB.9913.3	chr6	-	4497	4	novel_in_catalog	HLA-DPA1	novel	1704	6	NA	NA	-16	-8	intron_retention	FALSE	canonical	1	3135941	junction_1	410629.43575794576	NA	1	NA	TRUE	NA	NA	NA	B	coding	260	783	80	862	25.0	-13	True	AATAAA	-17
PB.9479.3	chr5	-	3617	11	full-splice_match	ETF1	ENST00000360541.9	3742	11	123	2	-26	-2	multi-exon	FALSE	canonical	1	333933	junction_2	290410.7289277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	100	1413	25.0	-13	True	ATTAAA	-10
PB.9479.4	chr5	-	3791	11	novel_in_catalog	ETF1	novel	3874	11	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	15894	junction_9	361902.6492433566	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	374	1588	30.0	-16	True	ATTAAA	-9
PB.5840.2	chr19	+	1199	2	full-splice_match	GDF15	ENST00000252809.3	1200	2	0	1	0	-1	multi-exon	FALSE	canonical	1	779064	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	33	959	15.0	0	True	AATAAA	-15
PB.9479.8	chr5	-	2424	11	full-splice_match	ETF1	ENST00000360541.9	3742	11	123	1195	-26	696	multi-exon	FALSE	canonical	1	333933	junction_2	290410.7289277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	100	1413	30.0	-13	True	ATTAAA	-30
PB.9479.9	chr5	-	2263	11	full-splice_match	ETF1	ENST00000360541.9	3742	11	135	1344	-14	547	multi-exon	FALSE	canonical	1	333933	junction_2	290410.7289277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	88	1401	55.0	-1	True	AATAAA	-18
PB.5840.3	chr19	+	1104	3	novel_not_in_catalog	GDF15	novel	562	2	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	389532.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	33	830	15.0	0	True	AATAAA	-15
PB.5034.1	chr17	-	2138	3	novel_in_catalog	ASB16-AS1	novel	2213	4	NA	NA	-26	17	combination_of_known_junctions	FALSE	canonical	1	657	junction_1	15841.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	193	582	842	1423	15.0	-41	False	AATAAA	-18
PB.5034.3	chr17	-	2224	4	novel_in_catalog	ASB16-AS1	novel	2213	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	657	junction_1	18573.855286994734	NA	3	NA	TRUE	NA	NA	NA	C	coding	35	108	274	381	75.0	-17	True	ATTAAA	-12
PB.5034.2	chr17	-	2271	4	full-splice_match	ASB16-AS1	ENST00000585457.5	2213	4	-70	12	-24	1	multi-exon	FALSE	canonical	1	657	junction_1	17114.668231276548	NA	1	NA	TRUE	NA	NA	NA	C	coding	35	108	320	427	70.0	-39	False	ATTAAA	-13
PB.5161.2	chr17	+	3044	24	novel_not_in_catalog	BCAS3	novel	545	6	NA	NA	-7	-102492	any annotated donor/acceptor	FALSE	canonical	1	569	junction_22	61890.70474738952	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	92	2533	20.0	-29	True	AATAAA	-14
PB.5161.3	chr17	+	2162	4	novel_not_in_catalog	BCAS3	novel	3673	26	NA	NA	-5625	0	any annotated donor/acceptor	FALSE	canonical	1	145	junction_1	104215.70761433017	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1116	1457	15.0	1	True	AATAAA	-21
PB.6467.14	chr2	+	9031	34	novel_in_catalog	SPTBN1	novel	8482	36	NA	NA	-11	0	intron_retention	FALSE	canonical	1	433650	junction_1	417332.2103412728	NA	17	1	TRUE	NA	NA	NA	C	coding	1503	4512	397	4908	20.0	0	True	ATTAAA	-14
PB.5161.1	chr17	+	2953	23	novel_not_in_catalog	BCAS3	novel	545	6	NA	NA	-18	-362	any annotated donor/acceptor	FALSE	canonical	1	2978	junction_22	56731.453847753204	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	103	2553	25.0	-40	True	AATAAA	-18
PB.5161.6	chr17	+	1182	3	novel_in_catalog	BCAS3	novel	3673	26	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	12186	junction_1	106824.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	126	381	97	477	15.0	-10	True	AATAAA	-21
PB.9008.9	chr4	+	4747	16	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	0	86	intron_retention	FALSE	canonical	1	18466	junction_14	183638.0451579683	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	137	1300	55.0	-3	True	ATTAAA	-13
PB.5161.4	chr17	+	1276	4	novel_in_catalog	BCAS3	novel	3673	26	NA	NA	-32	0	no_combination_of_known_junctions	TRUE	canonical	1	12186	junction_1	25398.905133883232	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	125	571	15.0	-6006	False	AATAAA	-21
PB.5161.5	chr17	+	2006	4	full-splice_match	BCAS3	ENST00000592702.5	2094	4	88	0	44	0	multi-exon	FALSE	canonical	1	623	junction_1	104096.00348076128	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	959	1300	15.0	-5886	False	AATAAA	-22
PB.9008.4	chr4	+	2376	17	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	-1	406	no_combination_of_known_junctions	FALSE	canonical	1	4306	junction_11	186327.31006513612	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	161	1900	10.0	-27	True	AATAAA	-17
PB.9008.5	chr4	+	4579	17	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	0	-6	intron_retention	FALSE	canonical	1	18466	junction_15	178554.7808063637	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	160	1323	30.0	-26	True	AATAAA	-28
PB.9008.6	chr4	+	3790	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	386	-255	4	255	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	130	1929	75.0	4	True	AAAAAG	-13
PB.9008.7	chr4	+	3455	17	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	0	406	intron_retention	FALSE	canonical	1	18466	junction_15	178554.7808063637	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	160	1323	10.0	-26	True	AATAAA	-17
PB.9008.1	chr4	+	3514	18	novel_not_in_catalog	ABCE1	novel	3921	18	NA	NA	11	-4	any annotated donor/acceptor	FALSE	canonical	1	5922	junction_10	179870.33107065526	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	149	1912	35.0	-15	True	AATAAA	-30
PB.9008.2	chr4	+	3313	18	novel_not_in_catalog	ABCE1	novel	3921	18	NA	NA	-3	-219	any annotated donor/acceptor	FALSE	canonical	1	5922	junction_10	179870.33107065526	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	163	1926	25.0	-29	True	NA	NA
PB.9008.3	chr4	+	2091	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	366	1464	10	72	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	150	1949	25.0	-16	True	CATAAA	-5
PB.11508.2	chr9	-	3530	9	full-splice_match	DCAF12	ENST00000361264.8	3667	9	135	2	135	-2	multi-exon	FALSE	canonical	1	502500	junction_8	171037.77069097193	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	208	1569	30.0	14	True	AATAAA	-14
PB.6759.1	chr2	-	2208	16	novel_in_catalog	DARS	novel	2361	16	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	1	16719	junction_15	331630.9671667121	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	164	1570	15.0	-6	True	NA	NA
PB.2164.1	chr11	-	2278	1	novel_in_catalog	XRRA1	novel	2339	14	NA	NA	8808	-48	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	NA	False	GGGGCT	-28
PB.617.12	chr1	+	2287	9	novel_in_catalog	CAPZA1	novel	3020	10	NA	NA	2	-8	no_combination_of_known_junctions	FALSE	canonical	1	1835	junction_3	419653.48150987545	NA	5	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	2	True	AATATA	-13
PB.617.10	chr1	+	2435	11	novel_not_in_catalog	CAPZA1	novel	3020	10	NA	NA	0	-77	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	365287.2748270326	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	339	1025	35.0	0	True	AATAAA	-24
PB.617.11	chr1	+	3390	3	full-splice_match	CAPZA1	ENST00000485542.5	739	3	29	-2680	2	2680	multi-exon	FALSE	canonical	1	891238	junction_2	274893.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	2	True	NA	NA
PB.1540.11	chr10	+	2579	5	incomplete-splice_match	MARCH5	ENST00000358935.2	3926	6	4	2596	4	1070	intron_retention	FALSE	canonical	1	372308	junction_1	77164.85615388653	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	329	1063	40.0	0	True	AATAAA	-30
PB.1540.10	chr10	+	2915	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	4	1007	4	-1007	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	329	1165	40.0	0	True	ATTAAA	-16
PB.1540.13	chr10	+	3680	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	19	227	19	-227	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	314	1150	35.0	15	True	TATAAA	-12
PB.1540.12	chr10	+	2513	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	4	1409	4	-1409	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	329	1165	15.0	0	True	ATTAAA	-31
PB.1540.14	chr10	+	2802	5	incomplete-splice_match	MARCH5	ENST00000358935.2	3926	6	150	2227	150	1439	intron_retention	FALSE	canonical	1	372308	junction_1	77164.85615388653	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	183	917	35.0	0	True	AATAAA	-37
PB.8268.6	chr3	+	1799	8	full-splice_match	TFG	ENST00000240851.8	1978	8	176	3	-5	0	multi-exon	FALSE	canonical	1	356923	junction_1	315349.0119986594	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	165	1367	25.0	-72	False	AATAAA	-14
PB.112.1	chr1	-	1794	1	genic	FLJ37453	novel	NA	NA	NA	NA	12279	399	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-9	False	NA	NA
PB.954.12	chr1	-	2385	15	novel_in_catalog	COP1	novel	2131	9	NA	NA	-187	0	no_combination_of_known_junctions	FALSE	canonical	1	2324	junction_13	122925.52638515049	NA	2	NA	TRUE	NA	NA	NA	C	coding	433	1302	763	2064	25.0	-27	True	AATAAA	-37
PB.8589.21	chr3	+	2037	1	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	17340	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.38.1	chr1	+	1494	8	full-splice_match	TNFRSF14	ENST00000355716.4	1707	8	133	80	-58	0	multi-exon	FALSE	canonical	1	345281	junction_3	84565.52262245036	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	167	1018	10.0	0	True	NA	NA
PB.6942.5	chr2	+	1196	6	novel_in_catalog	CFLAR	novel	14672	10	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	174040	junction_1	248098.3500522323	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	368	1033	10.0	8	True	NA	NA
PB.7344.12	chr20	-	2669	8	novel_in_catalog	ZNFX1	novel	5235	15	NA	NA	-47	0	no_combination_of_known_junctions	FALSE	canonical	1	6282	junction_3	92194.75439015619	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2529	141	2669	80.0	-56	True	NA	NA
PB.8725.2	chr4	+	1841	21	full-splice_match	TBC1D19	ENST00000264866.8	2263	21	147	275	-21	129	multi-exon	FALSE	canonical	1	13405	junction_9	24128.454917949057	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	132	1712	35.0	-6767	False	AATAAA	-21
PB.7381.40	chr20	+	2296	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	0	625	intron_retention	FALSE	canonical	1	226732	junction_3	246964.21715616123	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	725	1060	35.0	0	True	ATTAAA	-21
PB.2236.8	chr11	-	3451	10	full-splice_match	FAM76B	ENST00000358780.9	3952	10	197	304	21	-291	multi-exon	FALSE	canonical	1	114101	junction_9	67611.29543825873	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	117	1136	35.0	1347	False	AATAAA	-20
PB.2236.9	chr11	-	2269	10	full-splice_match	FAM76B	ENST00000358780.9	3952	10	265	1418	35	-245	multi-exon	FALSE	canonical	1	114101	junction_9	67611.29543825873	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	49	1068	35.0	-26	True	NA	NA
PB.9157.5	chr5	-	7977	40	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-33	-107	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_34	92186.1129807147	NA	0	NA	TRUE	NA	NA	NA	B	coding	2058	6177	502	6678	45.0	-45	False	NA	NA
PB.2236.6	chr11	-	4437	9	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	6	-1	intron_retention	FALSE	canonical	1	25804	junction_8	88632.64857968535	NA	19	2	TRUE	NA	NA	NA	C	coding	131	396	1435	1830	20.0	-1	True	AATAAA	-15
PB.2236.7	chr11	-	3719	11	full-splice_match	FAM76B	ENST00000398187.6	3823	11	103	1	49	-1	multi-exon	FALSE	canonical	1	60274	junction_3	88482.41630764838	NA	8	NA	TRUE	NA	NA	NA	C	coding	233	702	35	736	20.0	-12	True	AATAAA	-15
PB.2236.1	chr11	-	4372	9	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	-12	0	intron_retention	FALSE	canonical	1	114101	junction_8	65205.771127710585	NA	16	1	TRUE	NA	NA	NA	C	coding	231	696	96	791	20.0	1368	False	AATAAA	-16
PB.2236.2	chr11	-	3662	10	full-splice_match	FAM76B	ENST00000358780.9	3952	10	279	11	49	0	multi-exon	FALSE	canonical	1	114101	junction_9	67611.29543825873	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	35	1054	20.0	-12	True	AATAAA	-16
PB.2236.3	chr11	-	3794	10	novel_in_catalog	FAM76B	novel	3952	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	25804	junction_9	87129.85433120944	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-6	True	AATAAA	-16
PB.8385.4	chr3	-	1493	11	full-splice_match	ISY1	ENST00000393295.7	3842	11	208	2141	-37	-182	multi-exon	FALSE	canonical	1	350617	junction_10	116323.68414488943	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	111	968	70.0	9377	False	NA	NA
PB.8753.1	chr4	+	1079	8	full-splice_match	UCHL1	ENST00000512419.5	1119	8	17	23	-4	3	multi-exon	FALSE	canonical	0	0	junction_1	1376617.0343707334	NA	1	1	TRUE	NA	NA	NA	A	coding	142	429	292	720	20.0	0	True	AATAAA	-24
PB.12135.2	chrX	+	4327	22	novel_not_in_catalog	OGT	novel	5461	22	NA	NA	-11	-305	any annotated donor/acceptor	FALSE	canonical	1	7558	junction_4	359865.0396828462	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	1774	3771	20.0	-3	True	TATAAA	-12
PB.5348.3	chr17	+	2623	10	full-splice_match	NARF	ENST00000577812.5	2598	10	-23	-2	-8	0	multi-exon	FALSE	canonical	1	472427	junction_1	218598.20694350076	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	1950	2519	20.0	-22	True	ATTAAA	-17
PB.12135.1	chrX	+	7178	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	-21	-303	intron_retention	FALSE	canonical	1	110034	junction_1	345730.27965512365	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	3858	6620	15.0	-8925	False	TATAAA	-14
PB.12135.6	chrX	+	3924	22	full-splice_match	OGT	ENST00000373719.7	5461	22	-4	1541	-4	-299	multi-exon	FALSE	canonical	1	275340	junction_4	322124.1795623632	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3141	222	3362	15.0	4	True	TATAAA	-18
PB.12135.7	chrX	+	6994	20	novel_in_catalog	OGT	novel	5461	22	NA	NA	1	-299	intron_retention	FALSE	canonical	1	186997	junction_5	344976.8221245966	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	4435	6432	15.0	-8903	False	TATAAA	-18
PB.12135.4	chrX	+	3900	22	full-splice_match	OGT	ENST00000373701.7	3310	22	-50	-540	-10	-299	multi-exon	FALSE	canonical	1	110034	junction_1	386962.3928097036	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	228	3338	15.0	-2	True	TATAAA	-18
PB.5348.2	chr17	+	2771	10	novel_in_catalog	NARF	novel	599	4	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	1	19176	junction_1	312061.4545433774	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	2107	2676	45.0	1	True	ATTAAA	-8
PB.8385.1	chr3	-	1947	12	full-splice_match	ISY1	ENST00000273541.12	1704	12	-55	-188	-55	188	multi-exon	FALSE	canonical	0	0	junction_4	233604.26924842558	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	129	1052	25.0	-2	True	ATTAAA	-19
PB.12135.8	chrX	+	8707	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	-3	-7	intron_retention	FALSE	canonical	1	775434	junction_3	261028.86251923846	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	3849	6611	25.0	-3	True	AATAAA	-17
PB.12135.9	chrX	+	7170	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	-3	-302	intron_retention	FALSE	canonical	1	775434	junction_3	261028.86251923846	NA	2	NA	TRUE	NA	NA	NA	C	coding	920	2763	3849	6611	15.0	-3	True	TATAAA	-15
PB.5348.1	chr17	+	2909	11	novel_in_catalog	NARF	novel	599	4	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	1	1845	junction_6	411678.18921760964	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	2245	2814	45.0	1	True	ATTAAA	-8
PB.8083.16	chr3	-	4996	18	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-50	304	no_combination_of_known_junctions	FALSE	canonical	1	66207	junction_16	373151.2096524312	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	139	3528	40.0	380	False	AATAAA	-9
PB.3908.1	chr15	-	13265	83	full-splice_match	VPS13C	ENST00000249837.7	13300	83	31	4	5	0	multi-exon	TRUE	canonical	1	96861	junction_33	61084.901319106124	NA	5	1	TRUE	NA	NA	NA	C	coding	3710	11133	69	11201	20.0	446	False	AATAAA	-28
PB.8385.3	chr3	-	1680	11	full-splice_match	ISY1	ENST00000393295.7	3842	11	185	1977	-60	-18	multi-exon	FALSE	canonical	1	350617	junction_10	116323.68414488943	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	134	991	95.0	9354	False	NA	NA
PB.11580.1	chr9	+	3076	1	intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.8083.17	chr3	-	4858	17	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-52	302	combination_of_known_junctions	FALSE	canonical	1	180708	junction_4	357215.1134558139	NA	1	1	TRUE	NA	NA	NA	C	coding	1083	3252	141	3392	45.0	378	False	AATAAA	-7
PB.8385.2	chr3	-	1867	11	full-splice_match	ISY1	ENST00000393295.7	3842	11	204	1771	-41	188	multi-exon	FALSE	canonical	1	350617	junction_10	116323.68414488943	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	115	972	25.0	9373	False	ATTAAA	-19
PB.8560.8	chr3	+	2433	21	novel_not_in_catalog	ABCF3	novel	2624	21	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	2390	junction_12	133496.06854356237	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	17	1156	5.0	-7	True	ATTAAA	-17
PB.3687.3	chr14	+	2834	14	incomplete-splice_match	KLC1	ENST00000557450.5	2265	15	-67	-29	-3	-1	intron_retention	FALSE	canonical	1	103055	junction_13	393057.51544288045	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	335	2017	25.0	-216	False	ATTAAA	-15
PB.3687.2	chr14	+	2666	16	full-splice_match	KLC1	ENST00000246489.11	2294	16	-70	-302	-6	-2	multi-exon	FALSE	canonical	1	152515	junction_15	493782.6694579532	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	338	2239	25.0	-219	False	CATAAA	-19
PB.3687.1	chr14	+	3912	13	incomplete-splice_match	KLC1	ENST00000557575.5	2188	14	-67	4435	-7	1683	3prime_fragment	FALSE	canonical	1	623888	junction_1	254111.47802271522	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	339	2084	20.0	-220	False	NA	NA
PB.10548.3	chr7	+	1710	1	novel_in_catalog	LANCL2	novel	4353	9	NA	NA	193	-32094	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-52	False	AATAAA	-17
PB.3687.7	chr14	+	3198	14	full-splice_match	KLC1	ENST00000553286.5	3135	14	-52	-11	8	11	multi-exon	FALSE	canonical	1	213833	junction_13	370377.56883620494	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	324	1994	5.0	-205	False	AATAAA	-12
PB.3687.6	chr14	+	2320	15	novel_in_catalog	KLC1	novel	540	3	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	72817	junction_12	438706.02736948035	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	328	2046	50.0	-209	False	AATAAA	-15
PB.3687.5	chr14	+	2392	15	full-splice_match	KLC1	ENST00000348520.10	15091	15	0	12699	0	6	multi-exon	FALSE	canonical	1	128786	junction_13	421649.8734459428	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	332	2041	40.0	-213	False	ATTAAA	-22
PB.3687.4	chr14	+	2213	14	novel_in_catalog	KLC1	novel	540	3	NA	NA	-1	-9	no_combination_of_known_junctions	FALSE	canonical	1	69577	junction_13	400087.1877479595	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	333	1949	50.0	-214	False	AATAAA	-29
PB.3687.9	chr14	+	3948	14	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	-9	1683	any annotated donor/acceptor	FALSE	canonical	1	10063	junction_10	510191.3968244819	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	315	1622	20.0	-17	True	NA	NA
PB.3687.8	chr14	+	2479	16	full-splice_match	KLC1	ENST00000554280.5	2426	16	-52	-1	12	1	multi-exon	FALSE	canonical	1	106207	junction_13	479702.7093713865	NA	1	1	TRUE	NA	NA	NA	C	coding	605	1818	320	2137	25.0	-22	True	ATTAAA	-17
PB.8083.13	chr3	-	4912	19	novel_in_catalog	MAP4	novel	3724	10	NA	NA	0	302	combination_of_known_junctions	FALSE	canonical	1	432965	junction_1	311037.53580423835	NA	0	NA	TRUE	NA	NA	NA	C	coding	1151	3456	89	3544	45.0	6	True	AATAAA	-7
PB.6896.5	chr2	+	2659	21	full-splice_match	WDR75	ENST00000314761.8	2701	21	24	18	-5	1	multi-exon	FALSE	canonical	1	280498	junction_11	143739.66832207455	NA	1	NA	TRUE	NA	NA	NA	C	coding	830	2493	37	2529	60.0	5	True	AATAAA	-24
PB.6896.6	chr2	+	3452	21	full-splice_match	WDR75	ENST00000314761.8	2701	21	30	-781	1	781	multi-exon	FALSE	canonical	1	280498	junction_11	143739.66832207455	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	31	2523	45.0	-11	True	NA	NA
PB.6896.7	chr2	+	4025	21	full-splice_match	WDR75	ENST00000427960.5	4297	21	-10	282	4	-276	multi-exon	FALSE	canonical	1	15021	junction_2	176222.5020589808	NA	6	1	TRUE	NA	NA	NA	C	coding	560	1680	2346	4025	45.0	-2	True	AAAAAG	-15
PB.10291.3	chr6	-	3259	12	full-splice_match	IPCEF1	ENST00000367220.8	1658	12	-61	-1540	-4	2	multi-exon	FALSE	canonical	1	6082	junction_11	31250.376831050286	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	187	1503	80.0	6	True	NA	NA
PB.6896.2	chr2	+	2175	5	full-splice_match	WDR75	ENST00000472286.5	706	5	-10	-1459	6	1459	multi-exon	FALSE	canonical	1	313682	junction_4	66658.36052026783	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	42	605	55.0	0	True	NA	NA
PB.4585.8	chr16	+	7546	5	full-splice_match	KLHL36	ENST00000564996.5	2173	5	-3	-5370	-3	-2	multi-exon	FALSE	canonical	1	36922	junction_1	52293.51705039545	NA	28	1	TRUE	NA	NA	NA	C	coding	615	1848	148	1995	20.0	8	True	AATATA	-12
PB.4585.7	chr16	+	4729	5	full-splice_match	KLHL36	ENST00000564996.5	2173	5	-10	-2546	-10	2546	multi-exon	FALSE	canonical	1	36922	junction_1	52293.51705039545	NA	2	NA	TRUE	NA	NA	NA	C	coding	615	1848	155	2002	70.0	1	True	NA	NA
PB.4585.6	chr16	+	2179	5	full-splice_match	KLHL36	ENST00000564996.5	2173	5	-11	5	-11	0	multi-exon	FALSE	canonical	1	36922	junction_1	52293.51705039545	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	156	2003	35.0	0	True	ATTAAA	-17
PB.4585.5	chr16	+	2315	3	incomplete-splice_match	KLHL36	ENST00000564996.5	2173	5	-11	3344	-11	1816	3prime_fragment	FALSE	canonical	1	36922	junction_1	50212.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	156	1382	85.0	0	True	NA	NA
PB.4585.4	chr16	+	3998	4	novel_in_catalog	KLHL36	novel	2173	5	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	36922	junction_1	56415.883013759725	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	161	1387	35.0	-5	True	ATTAAA	-16
PB.4585.3	chr16	+	6934	5	full-splice_match	KLHL36	ENST00000564996.5	2173	5	-16	-4745	-16	-627	multi-exon	FALSE	canonical	1	36922	junction_1	52293.51705039545	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	161	2008	95.0	-5	True	NA	NA
PB.4585.2	chr16	+	7456	5	full-splice_match	KLHL36	ENST00000564996.5	2173	5	-17	-5266	-17	-106	multi-exon	FALSE	canonical	1	36922	junction_1	52293.51705039545	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	162	2009	10.0	-6	True	ATTAAA	-40
PB.4585.1	chr16	+	2946	5	full-splice_match	KLHL36	ENST00000564996.5	2173	5	-31	-742	-31	742	multi-exon	FALSE	canonical	1	36922	junction_1	52293.51705039545	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	176	2023	10.0	-20	False	AAAAAG	-19
PB.11284.5	chr8	-	4353	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	48	any annotated donor/acceptor	FALSE	canonical	1	33376	junction_10	473308.43983334186	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	749	2095	35.0	-1	True	AATAGA	-19
PB.274.1	chr1	-	2353	3	full-splice_match	TMEM35B	ENST00000373337.3	922	3	23	-1454	23	1454	multi-exon	FALSE	canonical	1	347247	junction_2	52301.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	26	490	95.0	-26	True	NA	NA
PB.839.1	chr1	+	6306	15	novel_in_catalog	KIRREL1	novel	3304	13	NA	NA	-4	-1228	combination_of_known_junctions	FALSE	canonical	1	90235	junction_8	67137.29543332856	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	72	2393	10.0	-39	True	ATTAAA	-21
PB.11891.6	chr9	+	1842	10	novel_not_in_catalog	RXRA	novel	5215	3	NA	NA	5471	9	any annotated donor/acceptor	FALSE	canonical	1	23904	junction_1	173566.34826806467	NA	0	NA	TRUE	NA	NA	NA	B	coding	435	1308	121	1428	15.0	0	True	NA	NA
PB.6445.41	chr2	-	2473	1	novel_in_catalog	PREPL	novel	6049	14	NA	NA	0	-12790	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.8406.3	chr3	-	3729	20	full-splice_match	ACAD11	ENST00000264990.10	4142	20	415	-2	-226	2	multi-exon	FALSE	canonical	1	100756	junction_6	46408.69951592054	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	558	2900	25.0	636	False	ATTAAA	-18
PB.6445.40	chr2	-	2731	14	novel_in_catalog	PREPL	novel	5657	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	3260	junction_6	242049.11044202404	NA	1	NA	TRUE	NA	NA	NA	C	coding	661	1986	219	2204	40.0	-2	True	AATAAA	-21
PB.9791.5	chr6	+	961	3	novel_not_in_catalog	HIST1H2AC	novel	1654	2	NA	NA	27	-712	any annotated donor/acceptor	FALSE	canonical	1	130179	junction_2	16254.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	62	454	15.0	0	True	NA	NA
PB.12121.8	chrX	+	6004	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	728	9	2	-9	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	17	727	35.0	0	True	ATTAAA	-20
PB.9791.7	chr6	+	1580	3	novel_not_in_catalog	HIST1H2AC	novel	1654	2	NA	NA	28	6	any annotated donor/acceptor	FALSE	canonical	1	37490	junction_1	46344.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	61	453	35.0	1	True	AATAAA	-16
PB.9791.6	chr6	+	1636	2	full-splice_match	HIST1H2AC	ENST00000314088.6	1668	2	27	5	27	-5	multi-exon	FALSE	canonical	1	288574	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	62	454	35.0	0	True	AATAAA	-19
PB.9791.1	chr6	+	1704	3	novel_not_in_catalog	HIST1H2AC	novel	1654	2	NA	NA	25	-3	any annotated donor/acceptor	FALSE	canonical	1	130179	junction_2	16254.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	64	456	35.0	-2	True	AATAAA	-21
PB.9791.3	chr6	+	1485	2	full-splice_match	HIST1H2AC	ENST00000377791.3	1654	2	27	142	27	-124	multi-exon	FALSE	canonical	1	288574	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	62	454	35.0	0	True	AATAAA	-21
PB.9791.2	chr6	+	1549	3	novel_not_in_catalog	HIST1H2AC	novel	1654	2	NA	NA	27	-124	any annotated donor/acceptor	FALSE	canonical	1	130179	junction_2	16254.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	62	454	35.0	0	True	AATAAA	-21
PB.12121.1	chrX	+	1350	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	705	4686	-6	617	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	40	750	95.0	-23	True	NA	NA
PB.12121.3	chrX	+	3835	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	706	2200	-5	-2181	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	39	749	25.0	-22	True	AGTAAA	-27
PB.12121.2	chrX	+	2477	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	704	3560	-7	1743	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	41	751	25.0	-24	True	AATAAA	-15
PB.12121.5	chrX	+	4298	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	717	1726	6	-1707	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	3	NA	TRUE	NA	NA	NA	C	coding	236	711	28	738	50.0	-11	True	AATAAA	-22
PB.12121.4	chrX	+	2093	7	novel_not_in_catalog	YIPF6	novel	6741	7	NA	NA	2	35168	any annotated donor/acceptor	FALSE	canonical	1	4673	junction_6	122261.05125463665	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	32	712	65.0	-15	True	ATTAAA	-11
PB.12121.7	chrX	+	3416	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	718	2607	7	-2588	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	27	737	30.0	-10	True	AATAAA	-20
PB.12121.6	chrX	+	2693	7	full-splice_match	YIPF6	ENST00000462683.5	6741	7	717	3331	6	1972	multi-exon	FALSE	canonical	1	307744	junction_1	27295.21077446046	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	28	738	20.0	-11	True	ATTAAA	-18
PB.3620.1	chr14	-	4666	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-8	-907	-8	131	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	142	1614	35.0	-2	True	ATTAAA	-15
PB.9030.1	chr4	-	4305	1	novel_in_catalog	TIGD4	novel	2472	2	NA	NA	139	-5967	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	103	False	NA	NA
PB.635.40	chr1	-	3303	18	full-splice_match	CSDE1	ENST00000530886.5	3459	18	44	112	0	-105	multi-exon	FALSE	canonical	1	57674	junction_16	1591977.2325184774	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	545	2551	80.0	-1	True	TTTAAA	-8
PB.8878.2	chr4	-	1288	2	full-splice_match	PYURF	ENST00000273968.4	1361	2	50	23	50	-23	multi-exon	FALSE	canonical	1	316335	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	114	345	64	408	55.0	-1	True	AATAAA	-20
PB.8878.1	chr4	-	2792	1	full-splice_match	PIGY	ENST00000527353.1	217	1	-1988	-587	-1988	587	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	-15	True	AATAAA	-42
PB.159.1	chr1	+	2673	1	full-splice_match	ZNF436-AS1	ENST00000335648.3	2547	1	-126	0	-108	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	126	381	189	569	30.0	-89	False	NA	NA
PB.364.2	chr1	+	1922	11	novel_in_catalog	RNF220	novel	3099	15	NA	NA	45	-1	combination_of_known_junctions	FALSE	canonical	1	328569	junction_1	246135.23808347716	NA	0	NA	TRUE	NA	NA	NA	B	coding	282	849	127	975	5.0	-6239	False	ATTAAA	-15
PB.11680.1	chr9	-	2624	12	full-splice_match	CORO2A	ENST00000375077.4	5459	12	-25	2860	-25	-2860	multi-exon	TRUE	canonical	1	68641	junction_11	21428.610620090094	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	108	1685	70.0	-30	True	NA	NA
PB.5149.1	chr17	+	2818	18	full-splice_match	DHX40	ENST00000251241.8	3660	18	64	778	-22	8	multi-exon	FALSE	canonical	1	1751	junction_13	189036.70437123138	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	84	2423	10.0	-67	False	ATTAAA	-22
PB.5149.2	chr17	+	3571	18	full-splice_match	DHX40	ENST00000251241.8	3660	18	85	4	-1	-4	multi-exon	FALSE	canonical	1	1751	junction_13	189036.70437123138	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	63	2402	45.0	0	True	ATTAAA	-5
PB.5149.3	chr17	+	2294	18	full-splice_match	DHX40	ENST00000251241.8	3660	18	86	1280	0	-193	multi-exon	FALSE	canonical	1	1751	junction_13	189036.70437123138	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2232	62	2293	65.0	1	True	AAGAAA	-5
PB.8813.2	chr4	+	5710	6	full-splice_match	MOB1B	ENST00000309395.6	6963	6	22	1231	11	-1231	multi-exon	FALSE	canonical	1	78627	junction_1	29166.36273792123	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	180	830	75.0	-11	True	NA	NA
PB.9020.7	chr4	+	3125	23	full-splice_match	ARHGAP10	ENST00000336498.7	3299	23	174	0	174	0	multi-exon	FALSE	canonical	1	90855	junction_20	48869.47008186854	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	66	2426	15.0	-42	False	AATAAA	-18
PB.9020.4	chr4	+	3081	22	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	25	-1	intron_retention	FALSE	canonical	1	2110	junction_5	73308.66120951239	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	794	2383	15.0	0	True	AATAAA	-17
PB.9020.5	chr4	+	3225	23	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	26	-3	intron_retention	FALSE	canonical	1	12714	junction_14	58732.14951431894	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	214	1482	15.0	1	True	AATAAA	-10
PB.9020.2	chr4	+	3204	22	novel_in_catalog	ARHGAP10	novel	1559	5	NA	NA	21	2	intron_retention	FALSE	canonical	1	5150	junction_3	60275.88021069956	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	219	2507	15.0	-4	True	AATAAA	-16
PB.3697.1	chr14	+	1866	1	incomplete-splice_match	CEP170B	ENST00000414716.7	6705	19	29577	15	956	13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	168	507	859	1365	10.0	1249	False	AATAAA	-30
PB.9020.1	chr4	+	2929	22	novel_in_catalog	ARHGAP10	novel	1559	5	NA	NA	211	-1	intron_retention	FALSE	canonical	1	30952	junction_20	54055.81525476369	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	29	2236	15.0	-5	False	AATAAA	-12
PB.4209.1	chr16	-	6428	20	full-splice_match	NLRC3	ENST00000359128.9	6401	20	-32	5	-23	0	multi-exon	FALSE	canonical	1	23618	junction_19	11641.360362340502	NA	1	NA	TRUE	NA	NA	NA	C	coding	1065	3198	444	3641	30.0	-35	True	AATAAA	-14
PB.4209.2	chr16	-	6473	20	novel_in_catalog	NLRC3	novel	6401	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	5276	junction_19	13946.576967613717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	489	3686	30.0	-19	True	AATAAA	-14
PB.8616.19	chr3	-	5534	20	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	1063	junction_15	544627.6207854104	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	970	2877	25.0	1	True	AATAAA	-15
PB.6870.1	chr2	+	4866	3	novel_in_catalog	AC009948.1	novel	490	3	NA	NA	1	61	intron_retention	FALSE	canonical	1	3884	junction_2	44034.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	127	384	1522	1905	15.0	-30	True	TATAAA	-42
PB.6870.2	chr2	+	2230	5	novel_not_in_catalog	AC009948.1	novel	490	3	NA	NA	4	2034	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	42804.019772534215	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-4	True	AATAAA	-18
PB.6870.3	chr2	+	5381	3	novel_in_catalog	AC009948.1	novel	490	3	NA	NA	7	8	intron_retention	FALSE	canonical	1	91952	junction_1	2105.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	127	384	1493	1876	15.0	-1	True	NA	NA
PB.11787.6	chr9	-	4094	8	full-splice_match	PPP6C	ENST00000451402.5	4349	8	163	92	7	-92	multi-exon	FALSE	canonical	1	6979	junction_7	430980.91673544253	NA	11	NA	TRUE	NA	NA	NA	C	coding	342	1029	59	1087	50.0	9	True	AATAAA	-12
PB.11787.7	chr9	-	3443	7	full-splice_match	PPP6C	ENST00000373547.8	4118	7	26	649	-9	-648	multi-exon	FALSE	canonical	1	582164	junction_6	176368.7410500606	NA	4	NA	TRUE	NA	NA	NA	C	coding	305	918	75	992	25.0	-7	True	AATAAA	-28
PB.537.3	chr1	+	2040	12	novel_in_catalog	RPAP2	novel	16993	13	NA	NA	-58	82	no_combination_of_known_junctions	FALSE	canonical	1	5935	junction_11	49933.1339297824	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	48	1748	50.0	-32	True	ATTAAA	-22
PB.11787.5	chr9	-	3815	5	novel_in_catalog	PPP6C	novel	4118	7	NA	NA	11	-83	no_combination_of_known_junctions	FALSE	canonical	1	26850	junction_3	419266.0276825294	NA	4	NA	TRUE	NA	NA	NA	C	coding	158	477	323	799	50.0	107	False	AATAAA	-21
PB.3497.18	chr14	+	3546	3	incomplete-splice_match	ZBTB1	ENST00000554015.5	2825	4	741	-777	0	777	5prime_fragment	FALSE	canonical	1	8839	junction_2	1675.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	713	2142	376	2517	35.0	0	True	AATAAA	-45
PB.3497.19	chr14	+	3187	2	incomplete-splice_match	ZBTB1	ENST00000358738.3	4119	3	152	9238	0	554	3prime_fragment	FALSE	canonical	1	163379	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	240	2381	45.0	0	True	ATTAAA	-38
PB.11787.1	chr9	-	4008	7	full-splice_match	PPP6C	ENST00000373547.8	4118	7	26	84	-9	-83	multi-exon	FALSE	canonical	1	582164	junction_6	176368.7410500606	NA	3	NA	TRUE	NA	NA	NA	C	coding	305	918	75	992	50.0	-7	True	AATAAA	-21
PB.3497.14	chr14	+	3067	4	full-splice_match	ZBTB1	ENST00000555321.1	629	4	-97	-2341	55	49	multi-exon	FALSE	canonical	1	12190	junction_1	23145.902982793497	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	625	2766	35.0	-141	False	ATTAAA	-12
PB.3497.15	chr14	+	3750	2	incomplete-splice_match	ZBTB1	ENST00000358738.3	4119	3	191	8636	39	1156	3prime_fragment	FALSE	canonical	1	163379	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	201	2342	20.0	-5	True	TATAAA	-18
PB.3497.16	chr14	+	3613	3	full-splice_match	ZBTB1	ENST00000358738.3	4119	3	193	313	41	-313	multi-exon	FALSE	canonical	1	43087	junction_2	60146.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	644	1935	199	2133	80.0	-3	True	NA	NA
PB.3497.17	chr14	+	5160	3	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	-16	4394	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	81689.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	713	2142	256	2397	25.0	-60	False	AATAAA	-17
PB.3497.10	chr14	+	3225	2	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	147	745	any annotated donor/acceptor	FALSE	canonical	1	762	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	87	2228	35.0	-638	False	AATAAA	-18
PB.3497.11	chr14	+	3801	3	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	154	-6	any annotated donor/acceptor	FALSE	canonical	1	762	junction_1	21162.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	80	2014	40.0	-631	False	AATAAA	-20
PB.3497.12	chr14	+	2513	2	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	167	53	any annotated donor/acceptor	FALSE	canonical	1	762	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	67	2208	35.0	-618	False	ATTAAA	-16
PB.3497.13	chr14	+	4080	3	novel_in_catalog	ZBTB1	novel	453	2	NA	NA	191	745	no_combination_of_known_junctions	FALSE	canonical	1	10478	junction_1	27530.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	713	2142	942	3083	35.0	-594	False	AATAAA	-18
PB.410.1	chr1	+	2614	9	novel_in_catalog	PRPF38A	novel	5274	10	NA	NA	-28	1156	no_combination_of_known_junctions	TRUE	canonical	1	3228	junction_6	119038.6837481833	NA	5	NA	TRUE	NA	NA	NA	C	coding	303	912	215	1126	20.0	-66	False	ATTAAA	-16
PB.410.3	chr1	+	2687	10	full-splice_match	PRPF38A	ENST00000257181.9	5274	10	-3	2590	-3	1227	multi-exon	FALSE	canonical	1	243586	junction_5	113717.44295119384	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	190	1128	25.0	-3	True	AATAAA	-18
PB.5340.8	chr17	-	8380	44	novel_not_in_catalog	FASN	novel	8565	43	NA	NA	-49	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	562833.3839400784	NA	2	1	TRUE	NA	NA	NA	C	coding	2511	7536	124	7659	10.0	-2	True	ATTAAA	-16
PB.410.5	chr1	+	1418	10	full-splice_match	PRPF38A	ENST00000257181.9	5274	10	38	3818	-18	-1	multi-exon	FALSE	canonical	1	243586	junction_5	113717.44295119384	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	149	1087	10.0	0	True	ATTAAA	-21
PB.410.4	chr1	+	3594	10	full-splice_match	PRPF38A	ENST00000257181.9	5274	10	34	1646	-22	-1646	multi-exon	FALSE	canonical	1	243586	junction_5	113717.44295119384	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	153	1091	60.0	-4	True	NA	NA
PB.410.7	chr1	+	2605	10	novel_not_in_catalog	PRPF38A	novel	5274	10	NA	NA	-18	1156	any annotated donor/acceptor	FALSE	canonical	1	3408	junction_7	134805.94520995955	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	149	1117	20.0	0	True	ATTAAA	-16
PB.410.6	chr1	+	2575	10	full-splice_match	PRPF38A	ENST00000257181.9	5274	10	38	2661	-18	1156	multi-exon	FALSE	canonical	1	243586	junction_5	113717.44295119384	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	149	1087	20.0	0	True	ATTAAA	-16
PB.9462.3	chr5	+	2288	6	novel_not_in_catalog	TXNDC15	novel	3548	5	NA	NA	8	-4	any annotated donor/acceptor	FALSE	canonical	1	59	junction_5	219849.5818450424	NA	2	1	TRUE	NA	NA	NA	B	coding	348	1047	81	1127	35.0	13	True	TATAAA	-14
PB.5340.6	chr17	-	8373	43	full-splice_match	FASN	ENST00000306749.3	8565	43	99	93	-46	-86	multi-exon	FALSE	canonical	1	379200	junction_42	507142.746305311	NA	0	NA	TRUE	NA	NA	NA	C	coding	2511	7536	121	7656	15.0	1	True	NA	NA
PB.1818.3	chr11	+	2856	21	incomplete-splice_match	CTR9	ENST00000361367.6	4586	25	260	6507	-205	-1073	3prime_fragment	FALSE	canonical	1	227951	junction_5	97354.25430041568	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2688	167	2854	70.0	-2	True	NA	NA
PB.1818.2	chr11	+	3028	22	incomplete-splice_match	CTR9	ENST00000361367.6	4586	25	262	5595	-203	-161	3prime_fragment	FALSE	canonical	1	227951	junction_5	96163.02568459629	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2862	165	3026	70.0	0	True	NA	NA
PB.1818.1	chr11	+	4333	25	full-splice_match	CTR9	ENST00000361367.6	4586	25	256	-3	-209	3	multi-exon	FALSE	canonical	1	227951	junction_5	117893.83509006337	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	171	3692	15.0	-6	True	AATAAA	-18
PB.9386.23	chr5	-	2881	6	full-splice_match	STARD4	ENST00000505803.5	803	6	26	-2104	-1	-831	multi-exon	FALSE	canonical	1	56844	junction_5	106670.86567643481	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	156	773	45.0	-2	True	ATTAAA	-25
PB.1818.7	chr11	+	3198	24	incomplete-splice_match	CTR9	ENST00000361367.6	4586	25	240	4193	-225	1241	3prime_fragment	FALSE	canonical	1	227951	junction_5	119477.70552913465	NA	0	NA	TRUE	NA	NA	NA	C	coding	1004	3012	187	3198	65.0	-22	True	NA	NA
PB.1818.6	chr11	+	3132	23	incomplete-splice_match	CTR9	ENST00000361367.6	4586	25	236	4480	-229	954	3prime_fragment	FALSE	canonical	1	227951	junction_5	101813.75747575887	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2940	191	3130	55.0	-26	True	NA	NA
PB.4215.1	chr16	+	2815	2	full-splice_match	VASN	ENST00000304735.3	2806	2	-14	5	-14	-5	multi-exon	FALSE	canonical	1	147066	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	673	2022	170	2191	5.0	-9904	False	AATAAA	-11
PB.1818.4	chr11	+	2648	20	novel_in_catalog	CTR9	novel	4586	25	NA	NA	-196	-1164	combination_of_known_junctions	FALSE	canonical	1	11851	junction_6	124189.12580174507	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2490	158	2647	70.0	7	True	NA	NA
PB.9386.28	chr5	-	2206	5	novel_in_catalog	STARD4	novel	4606	6	NA	NA	-3	1078	combination_of_known_junctions	FALSE	canonical	1	34239	junction_4	98343.7628093414	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	273	644	10.0	19	True	AATAAA	-16
PB.9386.29	chr5	-	2744	5	full-splice_match	STARD4	ENST00000502322.5	1467	5	31	-1308	3	563	multi-exon	FALSE	canonical	1	238159	junction_4	59671.317159084065	NA	2	1	TRUE	NA	NA	NA	C	coding	159	480	185	664	20.0	4	True	AATAAA	-34
PB.1818.9	chr11	+	2913	23	novel_not_in_catalog	CTR9	novel	4586	25	NA	NA	-205	-229	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	122386.0101811052	NA	2	1	TRUE	NA	NA	NA	C	coding	835	2508	167	2674	75.0	-2	True	NA	NA
PB.1818.8	chr11	+	4233	24	novel_in_catalog	CTR9	novel	4586	25	NA	NA	-217	3	combination_of_known_junctions	FALSE	canonical	1	11851	junction_6	139019.37611114755	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3414	179	3592	15.0	-14	True	AATAAA	-18
PB.635.45	chr1	-	3249	19	full-splice_match	CSDE1	ENST00000339438.10	4006	19	0	757	0	132	multi-exon	FALSE	canonical	1	1441617	junction_1	1263348.642629662	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	447	2750	60.0	-1	True	AATATA	-10
PB.94.1	chr1	-	1052	9	full-splice_match	MAD2L2	ENST00000376692.8	1118	9	66	0	-17	0	multi-exon	FALSE	canonical	1	529510	junction_8	237888.01365870534	NA	0	NA	TRUE	NA	NA	NA	A	coding	211	636	123	758	30.0	-1	True	AATAAA	-22
PB.6496.1	chr2	-	1973	4	full-splice_match	TMEM17	ENST00000335390.5	1797	4	-177	1	-49	-1	multi-exon	FALSE	canonical	1	28253	junction_3	3007.8198453734262	NA	0	NA	TRUE	NA	NA	NA	A	coding	198	597	390	986	20.0	-343	False	AATAAA	-27
PB.101.4	chr1	+	1539	10	full-splice_match	MIIP	ENST00000235332.5	1573	10	32	2	32	0	multi-exon	FALSE	canonical	1	200977	junction_1	102399.62345525387	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	138	1304	15.0	-3	True	AATAAA	-20
PB.6990.20	chr2	-	8029	46	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	2230192	junction_21	2739792.566254025	NA	0	NA	TRUE	NA	NA	NA	C	coding	2356	7071	267	7337	25.0	-1	True	AATAAA	-17
PB.6990.26	chr2	-	7077	41	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	4825	junction_4	2657121.1035489705	NA	0	NA	TRUE	NA	NA	NA	C	coding	2039	6120	267	6386	30.0	-1	True	AATAAA	-16
PB.8397.17	chr3	+	3334	27	full-splice_match	ATP2C1	ENST00000504948.5	4714	27	11	1369	7	439	multi-exon	FALSE	canonical	1	53219	junction_1	228071.19362707945	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	192	2903	25.0	-16	True	AATACA	-32
PB.635.44	chr1	-	3344	20	full-splice_match	CSDE1	ENST00000358528.8	4076	20	-21	753	2	132	multi-exon	FALSE	canonical	1	483912	junction_15	1625555.3695188337	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	449	2845	60.0	-3	True	AATATA	-10
PB.1720.1	chr10	-	1789	12	novel_in_catalog	STK32C	novel	1866	13	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	7691	junction_11	49617.51692848767	NA	1	NA	TRUE	NA	NA	NA	A	coding	369	1110	163	1272	10.0	NA	False	NA	NA
PB.6407.6	chr2	-	2579	9	novel_not_in_catalog	FAM98A	novel	2816	8	NA	NA	3	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	164881.39928857764	NA	10	2	TRUE	NA	NA	NA	C	coding	477	1434	68	1501	10.0	2	True	AATAAA	-17
PB.11693.1	chr9	+	3118	3	full-splice_match	ZNF189	ENST00000374861.7	3134	3	9	7	9	-7	multi-exon	FALSE	canonical	1	65305	junction_1	35497.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	276	2114	20.0	-8	True	ATTAAA	-16
PB.101.5	chr1	+	1716	10	novel_in_catalog	MIIP	novel	779	6	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	1	17959	junction_9	143018.35310128023	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	135	1235	15.0	0	True	AATAAA	-19
PB.1055.6	chr1	-	3814	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	-65	1478	-65	-1478	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	446	2587	10.0	5707	False	AATATA	-41
PB.1055.7	chr1	-	3728	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	-131	1630	-131	-1630	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	512	2653	25.0	5641	False	TATAAA	-9
PB.1055.4	chr1	-	2967	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	2256	4	2256	-4	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	8028	False	AATAAA	-16
PB.6407.5	chr2	-	2812	9	novel_not_in_catalog	FAM98A	novel	2816	8	NA	NA	30	-2	any annotated donor/acceptor	FALSE	canonical	1	3749	junction_6	200484.41827234355	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	320	1696	10.0	1	True	AATAAA	-18
PB.1055.3	chr1	-	4053	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	1167	7	1167	-7	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	416	1251	105	1355	40.0	6939	False	AATAAA	-13
PB.1055.1	chr1	-	4353	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	871	3	871	-3	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	416	1251	401	1651	35.0	6643	False	AATAAA	-17
PB.12190.15	chrX	+	3367	5	full-splice_match	ARMCX3	ENST00000341189.8	3730	5	362	1	-16	1	multi-exon	FALSE	canonical	1	104545	junction_1	177221.03315422242	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	616	1644	30.0	8	True	AATAAA	-36
PB.12190.14	chrX	+	3000	5	full-splice_match	ARMCX3	ENST00000467808.5	506	5	-100	-2394	-19	-495	multi-exon	FALSE	canonical	1	16435	junction_1	215016.30485500395	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	745	1773	55.0	5	True	AATAAA	-12
PB.12190.17	chrX	+	1986	5	full-splice_match	ARMCX3	ENST00000341189.8	3730	5	374	1370	-4	-11	multi-exon	FALSE	canonical	1	104545	junction_1	177221.03315422242	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	604	1632	80.0	20	True	AATAAA	-19
PB.12190.16	chrX	+	4133	3	novel_in_catalog	ARMCX3	novel	3730	5	NA	NA	-10	0	intron_retention	FALSE	canonical	1	467685	junction_2	36828.5	NA	15	1	TRUE	NA	NA	NA	C	coding	342	1029	1383	2411	30.0	14	True	AATAAA	-35
PB.12190.11	chrX	+	2359	4	novel_in_catalog	ARMCX3	novel	3730	5	NA	NA	18	-172	intron_retention	FALSE	canonical	1	467685	junction_3	30780.85945302156	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	1138	2166	25.0	-5	True	GATAAA	-22
PB.12190.10	chrX	+	2166	5	full-splice_match	ARMCX3	ENST00000491568.6	973	5	18	-1211	17	-11	multi-exon	FALSE	canonical	1	10562	junction_1	217539.99737217865	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	784	1812	80.0	-6	True	AATAAA	-19
PB.12190.13	chrX	+	3343	5	full-splice_match	ARMCX3	ENST00000471229.6	2051	5	66	-1358	-20	1	multi-exon	FALSE	canonical	1	286091	junction_1	100203.81955544409	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	592	1620	30.0	4	True	AATAAA	-36
PB.12190.12	chrX	+	2515	4	novel_in_catalog	ARMCX3	novel	3730	5	NA	NA	23	-11	intron_retention	FALSE	canonical	1	467685	junction_3	30780.85945302156	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	1133	2161	80.0	0	True	AATAAA	-19
PB.11693.2	chr9	+	3360	4	novel_in_catalog	ZNF189	novel	3134	3	NA	NA	-55	-7	no_combination_of_known_junctions	FALSE	canonical	1	11497	junction_2	52945.342023637924	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	605	2356	20.0	-1649	False	ATTAAA	-16
PB.11680.2	chr9	-	2439	12	full-splice_match	CORO2A	ENST00000375077.4	5459	12	-36	3056	-36	-3056	multi-exon	FALSE	canonical	1	68641	junction_11	21428.610620090094	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	119	1696	95.0	-41	False	NA	NA
PB.6407.1	chr2	-	3609	8	full-splice_match	FAM98A	ENST00000238823.12	2816	8	16	-809	16	809	multi-exon	FALSE	canonical	1	295690	junction_4	74178.77606492168	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	126	1682	40.0	-28	False	AATATA	-27
PB.11544.1	chr9	+	1247	9	full-splice_match	GRHPR	ENST00000318158.10	1280	9	32	1	2	0	multi-exon	FALSE	canonical	1	742421	junction_1	434476.1587629838	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	54	1040	25.0	0	True	ATTAAA	-13
PB.3906.5	chr15	-	3760	16	full-splice_match	ICE2	ENST00000261520.8	7209	16	3	3446	3	597	multi-exon	FALSE	canonical	1	105991	junction_3	48798.99104949701	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	233	3181	20.0	-17	True	AATAAA	-32
PB.3906.4	chr15	-	4858	17	novel_not_in_catalog	ICE2	novel	7209	16	NA	NA	9	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	60614.486992558916	NA	3	NA	TRUE	NA	NA	NA	C	coding	982	2949	214	3162	15.0	2	True	TATAAA	-19
PB.3906.7	chr15	-	3481	16	novel_not_in_catalog	ICE2	novel	7209	16	NA	NA	8	651	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	62508.92236949503	NA	3	NA	TRUE	NA	NA	NA	C	coding	627	1884	186	2069	35.0	30	True	AATAAA	-19
PB.3906.6	chr15	-	3567	16	full-splice_match	ICE2	ENST00000558181.5	7060	16	35	3458	7	581	multi-exon	FALSE	canonical	1	66281	junction_13	53642.49543470384	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	467	3004	40.0	0	True	AATAAA	-16
PB.3906.1	chr15	-	4690	17	novel_not_in_catalog	ICE2	novel	7209	16	NA	NA	0	7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	63396.71797289174	NA	5	NA	TRUE	NA	NA	NA	C	coding	845	2538	454	2991	25.0	13	True	TATAAA	-22
PB.3906.3	chr15	-	5170	16	full-splice_match	ICE2	ENST00000558181.5	7060	16	34	1856	6	7	multi-exon	FALSE	canonical	1	66281	junction_13	53642.49543470384	NA	3	NA	TRUE	NA	NA	NA	C	coding	845	2538	468	3005	25.0	-1	True	TATAAA	-22
PB.3906.2	chr15	-	5345	16	full-splice_match	ICE2	ENST00000261520.8	7209	16	4	1860	4	7	multi-exon	FALSE	canonical	1	105991	junction_3	48798.99104949701	NA	4	NA	TRUE	NA	NA	NA	C	coding	982	2949	232	3180	25.0	-16	True	TATAAA	-22
PB.635.46	chr1	-	2664	17	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	-1	132	combination_of_known_junctions	FALSE	canonical	1	5228	junction_16	1645414.2357057794	NA	2	NA	TRUE	NA	NA	NA	C	coding	668	2007	159	2165	60.0	-2	True	AATATA	-10
PB.3906.9	chr15	-	3500	16	full-splice_match	ICE2	ENST00000558181.5	7060	16	48	3512	0	527	multi-exon	FALSE	canonical	1	66281	junction_13	53642.49543470384	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	454	2991	40.0	13	True	AATAAA	-14
PB.3906.8	chr15	-	3595	17	novel_not_in_catalog	ICE2	novel	7209	16	NA	NA	4	527	any annotated donor/acceptor	FALSE	canonical	1	861	junction_2	67910.18726033949	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	553	2754	40.0	-16	True	AATAAA	-14
PB.9578.2	chr5	-	2158	1	incomplete-splice_match	ATOX1	ENST00000521264.5	4341	3	6209	1744	346	-1237	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.11693.3	chr9	+	3273	4	full-splice_match	ZNF189	ENST00000615466.1	2316	4	-242	-715	-26	-8	multi-exon	FALSE	canonical	1	2112	junction_2	29177.863553652376	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	774	2270	20.0	-43	True	ATTAAA	-15
PB.1502.25	chr10	+	2604	9	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	168	0	any annotated donor/acceptor	FALSE	canonical	1	1180	junction_1	161943.5530113425	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	112	945	5.0	-9550	False	AATATA	-18
PB.3689.1	chr14	+	1396	7	full-splice_match	ZFYVE21	ENST00000311141.6	1383	7	-8	-5	-8	-1	multi-exon	TRUE	canonical	1	296353	junction_1	145818.78661820485	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	43	747	15.0	-23	True	ATTAAA	-20
PB.3689.2	chr14	+	2821	5	full-splice_match	ZFYVE21	ENST00000554630.5	566	5	-21	-2234	2	0	multi-exon	FALSE	canonical	1	296353	junction_1	122988.15725914427	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	33	584	80.0	-13	True	NA	NA
PB.3182.9	chr13	+	3168	9	full-splice_match	CKAP2	ENST00000258607.9	3375	9	40	167	12	-167	multi-exon	FALSE	canonical	1	338978	junction_2	65041.38923204497	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	79	2127	55.0	-1	True	AATAAA	-16
PB.3182.8	chr13	+	3341	9	full-splice_match	CKAP2	ENST00000258607.9	3375	9	40	-6	12	6	multi-exon	FALSE	canonical	1	338978	junction_2	65041.38923204497	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	79	2127	40.0	-1	True	ATTAAA	-21
PB.2694.18	chr12	-	3837	23	novel_not_in_catalog	STAT6	novel	4034	22	NA	NA	-1	-41	intron_retention	FALSE	non_canonical	0	0	junction_1	314529.563032063	NA	2	NA	TRUE	NA	NA	NA	C	coding	847	2544	254	2797	75.0	-8	True	AATAAA	-10
PB.2694.19	chr12	-	3861	22	novel_in_catalog	STAT6	novel	4034	22	NA	NA	-2	-41	intron_retention	FALSE	canonical	1	6468	junction_19	320891.43027353927	NA	2	NA	TRUE	NA	NA	NA	C	coding	829	2490	249	2738	75.0	-3	True	AATAAA	-10
PB.4872.2	chr17	-	3600	20	full-splice_match	GIT1	ENST00000225394.7	3768	20	160	8	-36	-2	multi-exon	FALSE	canonical	1	190657	junction_19	116099.55030212033	NA	3	NA	TRUE	NA	NA	NA	A	coding	761	2286	90	2375	15.0	201	False	AATAAA	-12
PB.2694.12	chr12	-	4029	23	novel_in_catalog	STAT6	novel	4034	22	NA	NA	-10	-10	intron_retention	FALSE	canonical	1	20003	junction_10	358557.3651008786	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2598	278	2875	50.0	420	False	AATAAA	-41
PB.3182.3	chr13	+	3634	9	full-splice_match	CKAP2	ENST00000258607.9	3375	9	22	-281	-6	2	multi-exon	FALSE	canonical	1	338978	junction_2	65041.38923204497	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	97	2145	25.0	-19	True	AATAAA	-21
PB.3182.2	chr13	+	1803	8	incomplete-splice_match	CKAP2	ENST00000378037.9	3629	9	-26	2662	2	-1176	3prime_fragment	FALSE	canonical	1	110218	junction_2	136472.31387504266	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1686	117	1802	70.0	-39	True	AGTAAA	-32
PB.2694.16	chr12	-	4005	23	novel_not_in_catalog	STAT6	novel	4034	22	NA	NA	-14	-41	intron_retention	FALSE	non_canonical	0	0	junction_21	357357.5234181617	NA	25	6	TRUE	NA	NA	NA	C	coding	873	2622	261	2882	75.0	416	False	AATAAA	-10
PB.2694.17	chr12	-	3957	22	full-splice_match	STAT6	ENST00000454075.7	3037	22	-4	-916	-4	-41	multi-exon	FALSE	canonical	1	19651	junction_21	309893.1088508246	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	291	2834	75.0	-26	True	AATAAA	-10
PB.2694.14	chr12	-	3307	21	novel_not_in_catalog	STAT6	novel	4034	22	NA	NA	1	-15	intron_retention	FALSE	canonical	0	0	junction_1	323558.5222290204	NA	6	1	TRUE	NA	NA	NA	C	coding	752	2259	252	2510	55.0	-6	True	AATAAA	-36
PB.2694.15	chr12	-	4755	20	novel_in_catalog	STAT6	novel	4034	22	NA	NA	-15	-41	intron_retention	FALSE	canonical	1	530763	junction_19	262078.96680075608	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	1816	2877	75.0	415	False	AATAAA	-10
PB.2495.3	chr12	+	3078	8	incomplete-splice_match	AEBP2	ENST00000360995.8	2533	9	16	0	16	0	intron_retention	FALSE	canonical	1	9215	junction_1	118418.28908817856	NA	2	NA	TRUE	NA	NA	NA	C	coding	274	825	148	972	35.0	-2	True	AATAAA	-15
PB.2495.2	chr12	+	3121	8	full-splice_match	AEBP2	ENST00000266508.13	3620	8	478	21	-404	-20	multi-exon	FALSE	canonical	1	238107	junction_2	53981.76003550285	NA	19	NA	TRUE	NA	NA	NA	C	coding	295	888	148	1035	65.0	-422	False	NA	NA
PB.2495.1	chr12	+	2781	9	full-splice_match	AEBP2	ENST00000398864.7	5099	9	312	2006	287	9	multi-exon	FALSE	canonical	1	75185	junction_8	92010.44151132726	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	339	1268	45.0	-613	False	AATAAA	-25
PB.7115.2	chr2	+	1671	14	novel_in_catalog	ATG4B	novel	3294	13	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	60508	junction_3	220653.3451482225	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	346	1305	35.0	3	True	ATTAAA	-21
PB.8691.6	chr4	-	2038	1	novel_in_catalog	GRPEL1	novel	2775	4	NA	NA	-11	-4900	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-12	True	NA	NA
PB.8691.5	chr4	-	1198	4	full-splice_match	GRPEL1	ENST00000264954.4	2775	4	106	1471	-27	152	multi-exon	FALSE	canonical	1	669619	junction_3	149817.79858288608	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	60	713	35.0	-28	False	NA	NA
PB.8691.4	chr4	-	1509	4	full-splice_match	GRPEL1	ENST00000264954.4	2775	4	125	1141	-8	482	multi-exon	FALSE	canonical	1	669619	junction_3	149817.79858288608	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	41	694	30.0	-9	True	NA	NA
PB.787.5	chr1	-	3037	12	novel_in_catalog	PYGO2	novel	594	3	NA	NA	-10555	-2660	no_combination_of_known_junctions	FALSE	canonical	1	35263	junction_7	456739.2067681947	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	165	1532	10.0	-33	True	ATTAAA	-17
PB.2623.14	chr12	+	3423	12	novel_not_in_catalog	EIF4B	novel	4148	15	NA	NA	1103	-1	any annotated donor/acceptor	FALSE	canonical	1	3742	junction_3	241579.708970246	NA	16	1	TRUE	NA	NA	NA	C	coding	368	1107	332	1438	25.0	-7196	False	AATAAA	-18
PB.2623.15	chr12	+	3179	10	incomplete-splice_match	EIF4B	ENST00000262056.13	4148	15	16449	-3	3747	3	5prime_fragment	FALSE	canonical	1	3742	junction_1	239094.7006072471	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	99	1190	25.0	-7833	False	AATAAA	-22
PB.2623.10	chr12	+	2327	15	full-splice_match	EIF4B	ENST00000262056.13	4148	15	306	1515	-4	232	multi-exon	FALSE	canonical	1	557	junction_3	256631.0839923066	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	21	1856	25.0	8	True	AATAAA	-21
PB.10298.1	chr6	+	6165	18	incomplete-splice_match	ARID1B	ENST00000636930.1	8246	20	123548	242	102	-117	5prime_fragment	FALSE	canonical	1	106116	junction_9	57223.65058768372	NA	3	NA	TRUE	NA	NA	NA	B	coding	1659	4980	52	5031	80.0	NA	False	NA	NA
PB.2623.12	chr12	+	1793	13	incomplete-splice_match	EIF4B	ENST00000262056.13	4148	15	12639	1879	-63	-22	5prime_fragment	FALSE	canonical	1	557	junction_1	238535.71506454577	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	595	1686	20.0	-8362	False	AATAAA	-16
PB.7331.1	chr20	-	2370	5	novel_not_in_catalog	SLC13A3	novel	3994	13	NA	NA	12138	0	any annotated donor/acceptor	FALSE	canonical	1	723	junction_4	19905.53609394884	NA	0	NA	TRUE	NA	NA	NA	A	coding	164	495	283	777	30.0	7711	False	AATAAA	-12
PB.12068.1	chrX	-	3371	3	novel_in_catalog	TIMM17B	novel	964	7	NA	NA	-3	0	intron_retention	FALSE	canonical	1	627627	junction_2	121511.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	142	429	17	445	20.0	2	True	TTTAAA	-19
PB.7090.8	chr2	+	3544	8	novel_not_in_catalog	LRRFIP1	novel	2775	24	NA	NA	-11	-17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121517.83519991404	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	287	2422	90.0	-8	True	NA	NA
PB.12068.2	chrX	-	2562	4	novel_in_catalog	TIMM17B	novel	964	7	NA	NA	1	-1	intron_retention	FALSE	canonical	1	627627	junction_3	118554.06480027021	NA	4	NA	TRUE	NA	NA	NA	B	coding	142	429	22	450	20.0	-3	True	TTTAAA	-17
PB.8273.2	chr3	-	4618	11	novel_not_in_catalog	ZBTB11	novel	6020	11	NA	NA	-13	-552	any annotated donor/acceptor	FALSE	canonical	1	1900	junction_7	62415.04034004945	NA	0	NA	TRUE	NA	NA	NA	C	coding	891	2676	218	2893	20.0	0	True	AATAAA	-28
PB.8184.10	chr3	-	1990	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	50	1589	50	-2	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	52	1926	35.0	-1	True	TATAAA	-13
PB.7090.3	chr2	+	1800	9	novel_not_in_catalog	LRRFIP1	novel	2775	24	NA	NA	-5	-1542	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	115636.18000868068	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1536	263	1798	80.0	-3631	False	NA	NA
PB.6784.1	chr2	+	2675	1	antisense	novelGene_PRPF40A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7090.5	chr2	+	2264	12	novel_in_catalog	LRRFIP1	novel	2775	24	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	1	175105	junction_2	59757.16758281521	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	299	1483	25.0	-55	True	ATTAAA	-21
PB.8397.14	chr3	+	3538	27	full-splice_match	ATP2C1	ENST00000504948.5	4714	27	23	1153	19	655	multi-exon	FALSE	canonical	1	53219	junction_1	228071.19362707945	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	180	2891	20.0	-4	True	AGTAAA	-20
PB.7090.7	chr2	+	4193	7	incomplete-splice_match	LRRFIP1	ENST00000289175.10	3709	8	53	1860	-18	-1542	intron_retention	FALSE	canonical	1	175105	junction_2	63917.17888712618	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	933	3259	4191	80.0	-15	True	NA	NA
PB.10067.1	chr6	+	4726	25	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-93	278	combination_of_known_junctions	TRUE	canonical	1	48214	junction_2	176193.74713411293	NA	1	NA	TRUE	NA	NA	NA	C	coding	1003	3012	1127	4138	55.0	-677	False	AATAAA	-18
PB.11440.2	chr9	+	5758	5	incomplete-splice_match	CD274	ENST00000381577.3	3644	7	2	57	2	-57	intron_retention	FALSE	canonical	1	70419	junction_1	13032.367290231656	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	85	960	25.0	-9195	False	AATAAA	-27
PB.1075.6	chr1	+	3112	5	full-splice_match	RASSF5	ENST00000577571.5	3496	5	384	0	-12	0	multi-exon	FALSE	canonical	1	323017	junction_1	25755.538223603482	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	26	823	50.0	-7392	False	AATAAA	-11
PB.9142.1	chr5	-	7909	23	full-splice_match	SEMA5A	ENST00000382496.9	11762	23	-31	3884	-31	-3884	multi-exon	FALSE	canonical	1	43538	junction_22	11981.715820020752	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	698	3922	60.0	-17	False	NA	NA
PB.8788.8	chr4	+	3451	15	novel_not_in_catalog	CEP135	novel	5562	26	NA	NA	16120	-248	any annotated donor/acceptor	FALSE	canonical	1	2204	junction_1	31033.101513561614	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	138	1943	10.0	0	True	AATAAA	-15
PB.11693.6	chr9	+	2380	3	novel_not_in_catalog	ZNF189	novel	3134	3	NA	NA	-18	2007	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	32652.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-35	True	NA	NA
PB.8273.6	chr3	-	5728	10	novel_in_catalog	ZBTB11	novel	6020	11	NA	NA	-22	-553	intron_retention	FALSE	canonical	1	105282	junction_8	50946.56625219102	NA	17	1	TRUE	NA	NA	NA	C	coding	769	2310	1695	4004	20.0	-9	True	AATAAA	-27
PB.5562.1	chr19	+	2369	11	novel_not_in_catalog	STK11	novel	746	5	NA	NA	-90	0	intron_retention	TRUE	non_canonical	0	0	junction_1	223641.00217600973	NA	1	NA	TRUE	NA	NA	NA	B	coding	433	1302	550	1851	10.0	-596	False	AATAAA	-12
PB.5562.3	chr19	+	2227	11	novel_not_in_catalog	STK11	novel	746	5	NA	NA	-26	0	intron_retention	FALSE	non_canonical	0	0	junction_1	223641.00217600973	NA	6	1	TRUE	NA	NA	NA	B	coding	433	1302	408	1709	10.0	1	True	AATAAA	-12
PB.5562.2	chr19	+	2542	11	novel_not_in_catalog	STK11	novel	746	5	NA	NA	-48	0	intron_retention	FALSE	non_canonical	0	0	junction_1	223641.00217600973	NA	2	1	TRUE	NA	NA	NA	B	coding	433	1302	723	2024	10.0	-554	False	AATAAA	-12
PB.9765.1	chr6	-	4502	21	novel_in_catalog	KIF13A	novel	6924	38	NA	NA	-8759	-161	combination_of_known_junctions	FALSE	canonical	1	109959	junction_14	43708.90445847392	NA	0	NA	TRUE	NA	NA	NA	A	coding	1008	3027	34	3060	20.0	NA	False	AATGAA	-16
PB.253.1	chr1	+	3055	1	genic	IQCC	novel	NA	NA	NA	NA	-29	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	150	453	1999	2451	10.0	-3457	False	AATAAA	-18
PB.8273.4	chr3	-	4946	11	novel_not_in_catalog	ZBTB11	novel	6020	11	NA	NA	-24	-552	any annotated donor/acceptor	FALSE	canonical	1	6335	junction_1	70607.44413764033	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	229	2964	20.0	-11	True	AATAAA	-28
PB.5504.5	chr18	-	4704	31	novel_in_catalog	PIGN	novel	2493	25	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	51252.05426512732	NA	3	NA	TRUE	NA	NA	NA	C	coding	931	2796	280	3075	20.0	-74	True	AATAAA	-20
PB.9907.2	chr6	+	1589	6	full-splice_match	PSMB9	ENST00000374859.2	782	6	14	-821	14	821	multi-exon	FALSE	canonical	1	1030637	junction_2	163202.92424463478	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	56	715	85.0	-35	False	NA	NA
PB.7637.8	chr22	+	3172	21	full-splice_match	PPIL2	ENST00000335025.12	4929	21	3	1754	3	-15	multi-exon	FALSE	canonical	1	79804	junction_20	96782.66513610534	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	89	1651	90.0	0	True	TATAAA	-5
PB.5504.4	chr18	-	4715	30	full-splice_match	PIGN	ENST00000357637.10	4723	30	14	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_18	47549.61368063015	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	291	3086	20.0	-32	True	AATAAA	-20
PB.7637.6	chr22	+	2686	21	novel_in_catalog	AP000553.1	novel	1093	7	NA	NA	13741	27675	no_combination_of_known_junctions	FALSE	canonical	1	75636	junction_20	97340.20922274361	NA	2	NA	TRUE	NA	NA	NA	B	coding	520	1563	90	1652	30.0	-1	True	ATTAAA	-20
PB.7637.7	chr22	+	4052	21	novel_not_in_catalog	AP000553.1	novel	1093	7	NA	NA	13742	28024	any annotated donor/acceptor	FALSE	canonical	1	36921	junction_20	102758.47347391844	NA	0	NA	TRUE	NA	NA	NA	B	coding	520	1563	89	1651	90.0	0	True	TATAAA	-5
PB.7637.4	chr22	+	2763	15	incomplete-splice_match	PPIL2	ENST00000398831.7	2574	20	-13	6041	0	5504	3prime_fragment	FALSE	canonical	1	225695	junction_1	67664.81919882137	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	92	1234	90.0	-3	True	NA	NA
PB.7637.5	chr22	+	2776	21	novel_not_in_catalog	AP000553.1	novel	1093	7	NA	NA	13741	27674	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	108286.1860637242	NA	0	NA	TRUE	NA	NA	NA	B	coding	520	1563	90	1652	30.0	-1	True	ATTAAA	-19
PB.7637.2	chr22	+	2926	20	novel_in_catalog	AP000553.1	novel	1093	7	NA	NA	13728	27675	intron_retention	FALSE	canonical	1	79804	junction_19	94552.61416681399	NA	1	NA	TRUE	NA	NA	NA	B	coding	446	1341	103	1443	30.0	-14	True	ATTAAA	-20
PB.2481.1	chr12	+	4710	13	full-splice_match	FAM234B	ENST00000197268.12	4808	13	96	2	-1	-2	multi-exon	FALSE	canonical	1	67623	junction_12	18367.357237471286	NA	1	NA	TRUE	NA	NA	NA	A	coding	622	1869	25	1893	25.0	-9	True	AATAAA	-16
PB.7637.1	chr22	+	3728	21	novel_not_in_catalog	AP000553.1	novel	1093	7	NA	NA	13717	27675	any annotated donor/acceptor	FALSE	canonical	1	36921	junction_20	102758.47347391844	NA	0	NA	TRUE	NA	NA	NA	B	coding	520	1563	114	1676	30.0	-83	False	ATTAAA	-20
PB.962.3	chr1	+	4462	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	-59	2432	29	-2429	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	203	1855	30.0	1	True	NA	NA
PB.5504.6	chr18	-	4624	29	full-splice_match	PIGN	ENST00000640876.1	6045	29	46	1375	5	6	multi-exon	FALSE	canonical	0	0	junction_18	42182.547451523125	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	200	2995	20.0	-18	True	AATAAA	-20
PB.5730.2	chr19	+	2962	5	full-splice_match	ZNF627	ENST00000587939.5	591	5	-8	-2363	-8	1	multi-exon	FALSE	canonical	1	2111	junction_1	46306.788233476094	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	426	1715	30.0	-29	True	NA	NA
PB.5730.3	chr19	+	2466	4	full-splice_match	ZNF627	ENST00000361113.9	2840	4	64	310	1	-299	multi-exon	FALSE	canonical	1	69092	junction_1	13049.969740279947	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	145	1530	40.0	1	True	NA	NA
PB.5730.1	chr19	+	2792	4	full-splice_match	ZNF627	ENST00000361113.9	2840	4	43	5	1	-5	multi-exon	FALSE	canonical	1	69092	junction_1	13049.969740279947	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	166	1551	40.0	-20	True	NA	NA
PB.11637.9	chr9	+	4881	9	full-splice_match	SPIN1	ENST00000469017.6	2082	9	-21	-2778	-9	-2	multi-exon	FALSE	canonical	1	12	junction_3	242128.29771783052	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	678	1466	30.0	-35	True	AATAAA	-13
PB.150.1	chr1	-	3303	26	novel_not_in_catalog	RAP1GAP	novel	3584	27	NA	NA	23	-1	intron_retention	TRUE	non_canonical	0	0	junction_25	102929.66888493132	NA	1	1	TRUE	NA	NA	NA	A	coding	725	2178	50	2227	15.0	-21	True	AATAAA	-19
PB.9907.3	chr6	+	3010	1	novel_in_catalog	PSMB9	novel	792	6	NA	NA	28	-1239	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	16	51	248	298	100.0	-3	True	NA	NA
PB.5504.3	chr18	-	4761	30	novel_in_catalog	PIGN	novel	2493	25	NA	NA	0	6	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_19	55106.13009206996	NA	2	NA	TRUE	NA	NA	NA	C	coding	926	2781	214	2994	20.0	-32	True	AATAAA	-20
PB.8792.14	chr4	+	2548	10	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	108	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	450690.46799598995	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	54	1331	15.0	0	True	ATTAAA	-15
PB.11657.1	chr9	-	2719	3	full-splice_match	FAM120AOS	ENST00000423591.5	1800	3	-32	-887	-6	887	multi-exon	FALSE	canonical	1	281713	junction_1	4618.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	74	225	491	715	100.0	-41	True	NA	NA
PB.11733.6	chr9	-	4174	27	novel_in_catalog	FKBP15	novel	8807	28	NA	NA	-16	-11	no_combination_of_known_junctions	FALSE	canonical	1	2515	junction_25	89097.47468661805	NA	2	NA	TRUE	NA	NA	NA	C	coding	1087	3264	364	3627	40.0	0	True	AATAAA	-19
PB.11733.5	chr9	-	4326	28	novel_not_in_catalog	FKBP15	novel	8807	28	NA	NA	-34	-14	any annotated donor/acceptor	FALSE	canonical	1	17280	junction_9	85741.7616638043	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	153	3782	45.0	-5	True	AATAAA	-16
PB.11733.3	chr9	-	4154	27	novel_in_catalog	FKBP15	novel	8807	28	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	7507	junction_26	86444.39973853323	NA	3	NA	TRUE	NA	NA	NA	C	coding	1151	3456	141	3596	40.0	0	True	AATAAA	-30
PB.8898.1	chr4	-	2450	12	full-splice_match	EMCN	ENST00000296420.8	4037	12	-27	1614	-27	509	multi-exon	FALSE	canonical	1	54728	junction_3	19423.37548308802	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	207	992	90.0	-8	True	NA	NA
PB.8898.2	chr4	-	1572	12	full-splice_match	EMCN	ENST00000296420.8	4037	12	-22	2487	-22	-34	multi-exon	FALSE	canonical	1	54728	junction_3	19423.37548308802	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	202	987	50.0	-3	True	AATAAA	-24
PB.9646.1	chr5	+	3631	14	novel_in_catalog	GRK6	novel	557	4	NA	NA	18	-5	intron_retention	FALSE	canonical	1	84765	junction_2	190770.54381148622	NA	2	NA	TRUE	NA	NA	NA	C	coding	403	1212	1183	2394	20.0	13	True	AATAGA	-15
PB.9646.2	chr5	+	2157	16	full-splice_match	GRK6	ENST00000528793.5	2571	16	-147	561	18	0	multi-exon	TRUE	non_canonical	0	0	junction_15	207160.19358689545	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	151	1920	30.0	13	True	GGGGCT	-37
PB.9646.3	chr5	+	2931	16	full-splice_match	GRK6	ENST00000528793.5	2571	16	-138	-222	27	17	multi-exon	FALSE	non_canonical	0	0	junction_15	207160.19358689545	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	142	1911	20.0	-28	True	TTTAAA	-32
PB.9646.4	chr5	+	2704	16	full-splice_match	GRK6	ENST00000528793.5	2571	16	-138	5	27	-5	multi-exon	FALSE	non_canonical	0	0	junction_15	207160.19358689545	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	142	1911	20.0	-28	True	AATAGA	-15
PB.9646.5	chr5	+	2758	16	novel_not_in_catalog	GRK6	novel	557	4	NA	NA	29	-5	any annotated donor/acceptor	FALSE	canonical	1	14784	junction_8	202211.5960518585	NA	2	2	TRUE	NA	NA	NA	C	coding	311	936	993	1928	20.0	-26	True	AATAGA	-15
PB.7595.9	chr22	+	3123	5	full-splice_match	BCL2L13	ENST00000355028.4	4458	5	-65	1400	5	82	multi-exon	FALSE	canonical	1	17242	junction_4	123631.49956903176	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	818	1435	35.0	-11	True	AATAAA	-33
PB.9646.7	chr5	+	2404	14	incomplete-splice_match	GRK6	ENST00000528793.5	2571	16	5163	5	-227	-5	5prime_fragment	FALSE	non_canonical	0	0	junction_13	191740.56909528104	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	472	1611	20.0	-8598	False	AATAGA	-15
PB.6593.1	chr2	-	1606	1	intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-355	False	NA	NA
PB.11253.3	chr8	+	3513	5	full-splice_match	SDC2	ENST00000302190.8	3759	5	411	-165	-51	165	multi-exon	FALSE	canonical	1	703003	junction_1	98841.16545593491	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	598	1116	40.0	-51	False	ATTAAA	-28
PB.11693.9	chr9	+	3211	4	novel_not_in_catalog	ZNF189	novel	3134	3	NA	NA	-12	-7	any annotated donor/acceptor	FALSE	canonical	1	3208	junction_2	55740.97552070649	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	456	2207	20.0	-29	True	ATTAAA	-16
PB.224.4	chr1	+	2420	10	full-splice_match	SESN2	ENST00000253063.3	3453	10	-8	1041	-8	-1041	multi-exon	FALSE	canonical	1	107558	junction_1	50258.845829353915	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	330	1772	75.0	-5	True	NA	NA
PB.11657.2	chr9	-	3051	3	full-splice_match	FAM120AOS	ENST00000483149.6	1432	3	-322	-1297	13	886	multi-exon	FALSE	canonical	1	20696	junction_2	130508.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	78	237	89	325	100.0	1	True	NA	NA
PB.962.9	chr1	+	2629	15	novel_in_catalog	SOAT1	novel	6861	15	NA	NA	-31	-4104	no_combination_of_known_junctions	FALSE	canonical	1	5856	junction_10	117805.78769859194	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	175	1170	30.0	-31	True	AATAAA	-15
PB.11444.1	chr9	-	5377	15	full-splice_match	ERMP1	ENST00000339450.9	5376	15	8	-9	8	7	multi-exon	TRUE	canonical	1	133754	junction_13	48622.141191654904	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	83	2797	40.0	-66	True	AATAAA	-21
PB.2215.33	chr11	+	1911	3	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	13	20810	any annotated donor/acceptor	FALSE	canonical	1	151	junction_2	75253.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	49	1101	25.0	-778	False	AATAAA	-21
PB.2215.32	chr11	+	2144	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-18	-102	any annotated donor/acceptor	FALSE	canonical	1	120	junction_3	57293.201459160926	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	80	1138	55.0	0	True	ATTAAA	-13
PB.2215.31	chr11	+	2485	5	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-18	-9367	any annotated donor/acceptor	FALSE	canonical	1	656	junction_4	66578.38526269242	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	80	1306	75.0	0	True	NA	NA
PB.2215.30	chr11	+	5560	3	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-18	24428	any annotated donor/acceptor	FALSE	canonical	1	151	junction_2	75253.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	350	1053	80	1132	30.0	0	True	NA	NA
PB.2215.37	chr11	+	3537	1	novel_in_catalog	TYR	novel	2485	5	NA	NA	8354	-102	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	134	405	2842	3246	55.0	NA	False	ATTAAA	-13
PB.2215.36	chr11	+	1597	5	full-splice_match	TYR	ENST00000263321.5	2485	5	787	101	346	-101	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	1	1305	55.0	-445	False	ATTAAA	-14
PB.2215.35	chr11	+	1992	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	29	-102	any annotated donor/acceptor	FALSE	canonical	1	50	junction_4	61164.4532996086	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	33	1304	55.0	2	True	ATTAAA	-13
PB.2215.34	chr11	+	1772	5	full-splice_match	TYR	ENST00000263321.5	2485	5	466	247	25	204	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	37	1626	40.0	-2	True	AATACA	-18
PB.1998.2	chr11	-	2922	6	incomplete-splice_match	LBHD1	ENST00000354588.7	1320	7	-82	2	-77	-1	intron_retention	TRUE	canonical	1	58598	junction_5	786801.7248871281	NA	1	NA	TRUE	NA	NA	NA	A	coding	263	792	1821	2612	30.0	7424	False	AATAAA	-14
PB.1998.3	chr11	-	3104	6	novel_not_in_catalog	AP001458.2	novel	577	4	NA	NA	-6664	-13125	intron_retention	FALSE	canonical	0	0	junction_5	810694.7045771054	NA	1	NA	TRUE	NA	NA	NA	A	coding	159	480	2394	2873	30.0	7433	False	AATAAA	-14
PB.8014.2	chr3	+	2383	10	novel_not_in_catalog	GOLGA4	novel	7772	24	NA	NA	-873	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	215817.42831921842	NA	3	1	TRUE	NA	NA	NA	B	coding	338	1017	300	1316	30.0	-1584	False	AATAAA	-13
PB.8014.3	chr3	+	1753	9	novel_not_in_catalog	GOLGA4	novel	7772	24	NA	NA	-304	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	208479.87022338482	NA	2	1	TRUE	NA	NA	NA	B	coding	233	702	46	747	25.0	-1015	False	AATAAA	-15
PB.9907.1	chr6	+	785	6	full-splice_match	PSMB9	ENST00000374859.2	782	6	-7	4	6	-4	multi-exon	FALSE	canonical	1	1030637	junction_2	163202.92424463478	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	77	736	30.0	3	True	AATAAA	-13
PB.11796.1	chr9	+	2246	18	novel_not_in_catalog	RALGPS1	novel	2362	18	NA	NA	-3	-3	any annotated donor/acceptor	TRUE	canonical	1	2330	junction_12	20063.050413883593	NA	0	NA	TRUE	NA	NA	NA	A	coding	536	1611	296	1906	50.0	1	True	NA	NA
PB.1140.23	chr1	+	2854	21	novel_in_catalog	MIA3	novel	8142	28	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	1	10606	junction_6	194722.1280212139	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	147	2327	15.0	1	True	CATAAA	-19
PB.1043.1	chr1	-	2182	8	novel_not_in_catalog	ADIPOR1	novel	2177	8	NA	NA	17	-1	any annotated donor/acceptor	FALSE	canonical	1	38165	junction_4	552606.1140703739	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	774	1436	25.0	-3	True	AATAAA	-36
PB.3862.14	chr15	+	1740	11	incomplete-splice_match	USP8	ENST00000396444.7	19026	20	18	32737	1	0	3prime_fragment	FALSE	canonical	1	29826	junction_6	106759.71550186895	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1419	321	1739	85.0	-5	True	AAGAAA	-37
PB.3862.15	chr15	+	1559	11	incomplete-splice_match	USP8	ENST00000396444.7	19026	20	24	32912	1	-175	3prime_fragment	FALSE	canonical	1	29826	junction_6	106759.71550186895	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1245	315	1559	40.0	1	True	ACTAAA	-13
PB.1353.5	chr10	+	3525	9	full-splice_match	ZEB1	ENST00000361642.9	5990	9	37	2428	-3	91	multi-exon	FALSE	canonical	1	130574	junction_2	51401.78908304165	NA	0	NA	TRUE	NA	NA	NA	C	coding	1125	3378	27	3404	80.0	-7	True	NA	NA
PB.1353.4	chr10	+	5484	10	novel_in_catalog	ZEB1	novel	6026	13	NA	NA	-7	-2	no_combination_of_known_junctions	FALSE	canonical	1	13873	junction_1	103026.058027527	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	828	3548	20.0	-11	True	AATAAA	-18
PB.3862.10	chr15	+	1992	12	full-splice_match	USP8	ENST00000559329.5	1917	12	-6	-69	0	66	multi-exon	FALSE	canonical	1	23394	junction_1	114389.3297061754	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1509	484	1992	65.0	-6	True	AAAAAG	-3
PB.3862.11	chr15	+	4371	20	full-splice_match	USP8	ENST00000396444.7	19026	20	18	14637	1	6	multi-exon	FALSE	canonical	1	29826	junction_6	92574.93141919521	NA	1	NA	TRUE	NA	NA	NA	C	coding	1118	3357	321	3677	5.0	-5	True	ATTAAA	-26
PB.3862.12	chr15	+	4391	21	novel_in_catalog	USP8	novel	652	5	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	27878	junction_1	96759.15723666675	NA	2	NA	TRUE	NA	NA	NA	C	coding	1118	3357	343	3699	10.0	-5	True	ATTAAA	-24
PB.3862.13	chr15	+	2859	17	incomplete-splice_match	USP8	ENST00000307179.8	4243	20	18	3908	1	-3539	3prime_fragment	FALSE	canonical	1	29826	junction_6	97884.43882959321	NA	1	NA	TRUE	NA	NA	NA	C	coding	893	2679	181	2859	65.0	-5	True	NA	NA
PB.11284.8	chr8	-	4081	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-48	any annotated donor/acceptor	FALSE	canonical	1	13952	junction_10	416094.7835683715	NA	1	1	TRUE	NA	NA	NA	C	coding	448	1347	573	1919	20.0	-1	True	AGTAAA	-15
PB.6687.8	chr2	-	3470	25	novel_not_in_catalog	BUB1	novel	3576	24	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	3968	junction_11	114651.48446862507	NA	5	2	TRUE	NA	NA	NA	C	coding	1090	3273	69	3341	40.0	-1	True	AATAAA	-21
PB.6687.9	chr2	-	3346	25	full-splice_match	BUB1	ENST00000302759.10	3507	25	51	110	0	-110	multi-exon	FALSE	canonical	1	297598	junction_23	76299.71470908329	NA	4	NA	TRUE	NA	NA	NA	C	coding	1085	3258	69	3326	50.0	-1	True	AATAAA	-20
PB.1075.7	chr1	+	3270	4	novel_in_catalog	RASSF5	novel	2064	6	NA	NA	110	0	combination_of_known_junctions	FALSE	canonical	1	30689	junction_3	155841.25049193134	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	300	851	50.0	-19	True	AATAAA	-11
PB.5451.10	chr18	-	2385	9	incomplete-splice_match	SLC39A6	ENST00000269187.9	3543	10	-20	2491	-20	-23	3prime_fragment	FALSE	canonical	1	457822	junction_8	142787.9724396894	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	235	2361	70.0	-2	True	NA	NA
PB.6687.6	chr2	-	3370	25	full-splice_match	BUB1	ENST00000302759.10	3507	25	50	87	-1	-87	multi-exon	FALSE	canonical	1	297598	junction_23	76299.71470908329	NA	1	NA	TRUE	NA	NA	NA	C	coding	1085	3258	70	3327	30.0	-2	True	AATAAA	-43
PB.8788.9	chr4	+	3041	15	novel_not_in_catalog	CEP135	novel	5562	26	NA	NA	16120	-658	any annotated donor/acceptor	FALSE	canonical	1	2204	junction_1	31033.101513561614	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	138	1943	90.0	0	True	NA	NA
PB.8159.6	chr3	+	2139	10	incomplete-splice_match	ALAS1	ENST00000484952.5	2356	12	1005	-11	1005	11	5prime_fragment	FALSE	canonical	1	502144	junction_1	97239.55180105026	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	94	2016	45.0	-9020	False	ATTAAA	-31
PB.9391.3	chr5	+	3564	4	full-splice_match	SRP19	ENST00000445150.3	833	4	-44	-2687	-7	-29	multi-exon	FALSE	canonical	1	52271	junction_2	181727.82377745266	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	90	404	15.0	-17	True	AATAAA	-45
PB.6687.3	chr2	-	3765	25	full-splice_match	BUB1	ENST00000302759.10	3507	25	51	-309	0	173	multi-exon	FALSE	canonical	1	297598	junction_23	76299.71470908329	NA	1	NA	TRUE	NA	NA	NA	C	coding	1085	3258	69	3326	10.0	-1	True	AATAAA	-20
PB.821.8	chr1	-	4397	21	novel_in_catalog	SMG5	novel	4559	22	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	16439	junction_6	172883.30906177728	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	145	3036	10.0	0	True	AATAAA	-13
PB.5451.12	chr18	-	1593	5	incomplete-splice_match	SLC39A6	ENST00000269187.9	3543	10	-38	13538	25	-11014	3prime_fragment	FALSE	canonical	1	457822	junction_4	142032.37519730316	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1341	253	1593	65.0	-20	True	NA	NA
PB.821.1	chr1	-	5986	29	novel_not_in_catalog	PAQR6	novel	2277	7	NA	NA	-34707	0	any annotated donor/acceptor	TRUE	canonical	1	32637	junction_7	213618.76464092353	NA	1	1	TRUE	NA	NA	NA	A	coding	1016	3051	145	3195	40.0	0	True	NA	NA
PB.821.3	chr1	-	4484	21	novel_in_catalog	SMG5	novel	4559	22	NA	NA	-5	-1	no_combination_of_known_junctions	FALSE	canonical	1	11699	junction_15	167431.1228703911	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	945	3122	5.0	-6	True	AATAAA	-14
PB.821.2	chr1	-	5153	22	full-splice_match	SMG5	ENST00000361813.5	4559	22	3	-597	3	597	multi-exon	FALSE	canonical	1	329560	junction_21	106126.4113469342	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	143	3193	95.0	2	True	NA	NA
PB.821.5	chr1	-	4539	22	full-splice_match	SMG5	ENST00000361813.5	4559	22	18	2	18	-2	multi-exon	FALSE	canonical	1	329560	junction_21	106126.4113469342	NA	4	NA	TRUE	NA	NA	NA	C	coding	1016	3051	128	3178	10.0	17	True	AATAAA	-13
PB.821.4	chr1	-	4707	23	novel_not_in_catalog	SMG5	novel	4559	22	NA	NA	-18	-2	any annotated donor/acceptor	FALSE	canonical	1	8309	junction_22	200230.19992133352	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	494	3346	10.0	-19	True	AATAAA	-13
PB.821.7	chr1	-	4441	22	novel_not_in_catalog	SMG5	novel	4559	22	NA	NA	299	-2	any annotated donor/acceptor	FALSE	canonical	1	2427	junction_21	159869.03674946507	NA	0	NA	TRUE	NA	NA	NA	C	coding	999	3000	81	3080	10.0	8961	False	AATAAA	-13
PB.821.6	chr1	-	4528	22	novel_not_in_catalog	SMG5	novel	4559	22	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	13998	junction_7	169121.30298412326	NA	1	NA	TRUE	NA	NA	NA	C	coding	789	2370	146	2515	10.0	-1	True	AATAAA	-13
PB.5796.2	chr19	+	2466	8	full-splice_match	TPM4	ENST00000643579.1	2407	8	1	-60	1	-2	multi-exon	FALSE	canonical	1	1814	junction_7	668384.2046523963	NA	20	2	TRUE	NA	NA	NA	C	coding	248	747	63	809	35.0	1	True	AATAAA	-17
PB.1362.10	chr10	-	3792	17	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	381	junction_4	2000352.8919555005	NA	2	NA	TRUE	NA	NA	NA	C	coding	825	2478	103	2580	20.0	-27	True	ATTAAA	-24
PB.1362.17	chr10	-	3788	17	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-30	-3	any annotated donor/acceptor	FALSE	canonical	1	381	junction_4	2000053.8711781285	NA	1	NA	TRUE	NA	NA	NA	C	coding	819	2460	119	2578	15.0	38	False	ATTAAA	-22
PB.11258.1	chr8	+	3636	19	full-splice_match	MATN2	ENST00000254898.6	4106	19	-32	502	-32	0	multi-exon	FALSE	canonical	1	108022	junction_1	64468.611507418434	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	264	3134	35.0	-64	True	ATTAAA	-19
PB.1362.15	chr10	-	3661	16	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	2052992.8000853672	NA	23	1	TRUE	NA	NA	NA	C	coding	798	2397	89	2485	20.0	8	True	ATTAAA	-23
PB.1362.14	chr10	-	3778	17	novel_in_catalog	ITGB1	novel	3729	16	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	1	381	junction_3	2140770.6876149313	NA	3	NA	TRUE	NA	NA	NA	C	coding	741	2226	377	2602	20.0	-28	True	ATTAAA	-23
PB.6697.3	chr2	+	3547	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	503	508	-1	-238	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	1	NA	TRUE	NA	NA	NA	C	coding	1135	3408	78	3485	45.0	-47	True	ATTAAA	-21
PB.6697.2	chr2	+	4877	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	532	-851	-3	0	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	1	NA	TRUE	NA	NA	NA	C	coding	1135	3408	49	3456	35.0	-18	True	NA	NA
PB.6697.1	chr2	+	4007	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	549	2	-1	2	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	2	NA	TRUE	NA	NA	NA	C	coding	1135	3408	32	3439	10.0	-1	True	NA	NA
PB.6697.7	chr2	+	5125	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	525	-1092	-10	241	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	3	NA	TRUE	NA	NA	NA	C	coding	1135	3408	56	3463	60.0	-25	True	NA	NA
PB.6697.6	chr2	+	4981	16	full-splice_match	POLR1B	ENST00000333990.10	4376	16	246	-851	-15	0	multi-exon	TRUE	canonical	1	4787	junction_1	75140.52406033792	NA	1	NA	TRUE	NA	NA	NA	C	coding	996	2991	570	3560	35.0	-30	True	NA	NA
PB.6697.5	chr2	+	5419	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	517	-1378	13	527	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	0	NA	TRUE	NA	NA	NA	C	coding	1135	3408	64	3471	45.0	-33	True	NA	NA
PB.6697.4	chr2	+	3735	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	507	316	3	-46	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	2	NA	TRUE	NA	NA	NA	C	coding	1135	3408	74	3481	25.0	-43	True	GATAAA	-9
PB.6697.9	chr2	+	2420	10	novel_not_in_catalog	POLR1B	novel	4558	15	NA	NA	-7	3217	any annotated donor/acceptor	FALSE	canonical	1	894	junction_9	65613.11106632934	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	53	1858	25.0	-22	True	NA	NA
PB.6489.57	chr2	-	3525	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	204	3407	5.0	-1	True	ATTAAA	-19
PB.1633.1	chr10	+	3104	10	novel_in_catalog	TAF5	novel	3268	11	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	5372	junction_7	34736.961622534465	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	27	2264	45.0	-12	True	AATAAA	-25
PB.1633.2	chr10	+	2438	11	full-splice_match	TAF5	ENST00000369839.3	3268	11	-1	831	-1	-831	multi-exon	FALSE	canonical	1	53458	junction_1	22897.41672874912	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	25	2427	35.0	-10	True	AATAAA	-11
PB.1633.3	chr10	+	2741	11	full-splice_match	TAF5	ENST00000369839.3	3268	11	523	4	523	-4	multi-exon	FALSE	canonical	1	53458	junction_1	22897.41672874912	NA	2	NA	TRUE	NA	NA	NA	C	coding	588	1767	137	1903	40.0	514	False	AATAAA	-23
PB.1633.4	chr10	+	2790	11	full-splice_match	TAF5	ENST00000369839.3	3268	11	14	464	14	-464	multi-exon	FALSE	canonical	1	53458	junction_1	22897.41672874912	NA	1	NA	TRUE	NA	NA	NA	C	coding	800	2403	10	2412	40.0	5	True	AATATA	-23
PB.7625.2	chr22	+	3906	5	full-splice_match	ZNF74	ENST00000400451.6	3159	5	36	-783	-10	0	multi-exon	FALSE	canonical	1	47976	junction_1	28636.56956039777	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	479	2413	10.0	-2	True	AATAAA	-26
PB.7625.1	chr22	+	3147	5	full-splice_match	ZNF74	ENST00000400451.6	3159	5	14	-2	1	0	multi-exon	FALSE	canonical	1	47976	junction_1	28636.56956039777	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	501	2435	30.0	-45	False	AATAAA	-19
PB.9907.4	chr6	+	1901	6	full-splice_match	PSMB9	ENST00000374859.2	782	6	31	-1150	31	1150	multi-exon	FALSE	canonical	1	1030637	junction_2	163202.92424463478	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	39	698	5.0	0	True	ATTAAA	-22
PB.11733.9	chr9	-	2077	20	incomplete-splice_match	FKBP15	ENST00000238256.7	4336	28	28	13209	-15	5563	3prime_fragment	FALSE	canonical	1	163856	junction_16	55602.59437384638	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1986	91	2076	60.0	57	False	NA	NA
PB.1231.1	chr1	+	1913	15	full-splice_match	KMO	ENST00000366559.8	5261	15	0	3348	0	6	multi-exon	FALSE	canonical	1	24860	junction_1	7260.34593683035	NA	0	NA	TRUE	NA	NA	NA	A	coding	526	1581	192	1772	30.0	0	True	ATTAAA	-21
PB.11657.6	chr9	-	2292	4	novel_in_catalog	FAM120AOS	novel	2613	8	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	8478	junction_3	112762.38242822333	NA	8	NA	TRUE	NA	NA	NA	C	coding	24	75	487	561	30.0	-37	True	AGTAAA	-22
PB.11536.4	chr9	-	3373	13	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	21	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	62445.841619569735	NA	1	1	TRUE	NA	NA	NA	C	coding	722	2169	201	2369	20.0	0	True	AATAAA	-16
PB.11346.7	chr8	+	3243	8	full-splice_match	PHF20L1	ENST00000337920.8	2311	8	-56	-876	-6	4	multi-exon	FALSE	canonical	1	98842	junction_1	74960.04177791618	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	328	1185	25.0	-36	True	AATAAA	-18
PB.550.3	chr1	-	2690	6	full-splice_match	GCLM	ENST00000615724.1	3008	6	-137	455	-137	-455	multi-exon	FALSE	canonical	1	16767	junction_5	187024.2137249613	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	431	1189	75.0	4	True	NA	NA
PB.5796.8	chr19	+	2430	8	novel_not_in_catalog	TPM4	novel	1417	9	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_1	778380.2049961948	NA	2	1	TRUE	NA	NA	NA	C	coding	235	708	66	773	35.0	-2	True	AATAAA	-17
PB.11470.1	chr9	+	4310	7	full-splice_match	CNTLN	ENST00000380641.4	4871	7	-48	609	10	-609	multi-exon	FALSE	canonical	1	54124	junction_5	24235.89458954539	NA	4	NA	TRUE	NA	NA	NA	C	coding	391	1176	75	1250	25.0	1	True	AATAAA	-33
PB.11733.8	chr9	-	2901	26	incomplete-splice_match	FKBP15	ENST00000238256.7	4336	28	41	4365	-2	-4365	3prime_fragment	FALSE	canonical	1	163856	junction_22	71730.56394654652	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2823	78	2900	70.0	-25	True	NA	NA
PB.1623.6	chr10	-	1262	11	full-splice_match	ACTR1A	ENST00000369905.8	2829	11	-2	1569	-2	-3	multi-exon	FALSE	canonical	1	733304	junction_10	184951.84246470756	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	67	1197	20.0	-2	True	TTTAAA	-18
PB.1623.4	chr10	-	2738	10	novel_in_catalog	ACTR1A	novel	1046	8	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	4789	junction_4	349660.76922898064	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	68	1105	10.0	-3	True	AATAAA	-21
PB.1623.3	chr10	-	2766	10	novel_in_catalog	ACTR1A	novel	1046	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	20683	junction_9	343557.434414332	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	144	1133	10.0	-3	True	AATAAA	-21
PB.1623.2	chr10	-	2831	11	full-splice_match	ACTR1A	ENST00000369905.8	2829	11	-3	1	-3	0	multi-exon	FALSE	canonical	1	733304	junction_10	184951.84246470756	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	68	1198	10.0	-3	True	AATAAA	-21
PB.1623.1	chr10	-	3887	10	novel_in_catalog	ACTR1A	novel	1046	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	733304	junction_9	194946.58599089694	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	68	748	10.0	-3	True	AATAAA	-21
PB.2415.3	chr12	+	1378	9	full-splice_match	GAPDH	ENST00000396861.5	1348	9	-17	-13	5	1	multi-exon	FALSE	canonical	1	100454	junction_1	9295036.139177572	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	169	1176	10.0	0	True	AATAAA	-20
PB.2415.2	chr12	+	1413	8	full-splice_match	GAPDH	ENST00000474249.5	1333	8	-24	-56	5	-1	multi-exon	FALSE	canonical	1	14448625	junction_6	5705835.174080647	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	329	1213	15.0	0	True	AATAAA	-18
PB.2415.1	chr12	+	1284	9	full-splice_match	GAPDH	ENST00000229239.9	1875	9	590	1	5	-1	multi-exon	FALSE	canonical	1	9781025	junction_4	6632282.604425896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	77	1084	15.0	0	True	AATAAA	-18
PB.9475.3	chr5	+	4082	6	novel_not_in_catalog	FAM53C	novel	558	6	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_4	146816.287763177	NA	1	1	TRUE	NA	NA	NA	C	coding	284	855	198	1052	25.0	-3	True	AATAAA	-30
PB.2415.7	chr12	+	3237	6	novel_in_catalog	GAPDH	novel	1875	9	NA	NA	6	-1	intron_retention	FALSE	canonical	1	17622502	junction_3	5572776.358727079	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	2378	3037	15.0	1	True	AATAAA	-18
PB.2415.6	chr12	+	3419	4	novel_in_catalog	GAPDH	novel	1875	9	NA	NA	6	-1	intron_retention	FALSE	canonical	1	18898749	junction_2	2801170.426700517	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	2560	3219	15.0	1	True	AATAAA	-18
PB.2415.5	chr12	+	3330	5	novel_in_catalog	GAPDH	novel	1875	9	NA	NA	5	1	intron_retention	FALSE	canonical	1	18898749	junction_2	5289928.699975283	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	2469	3128	10.0	0	True	AATAAA	-20
PB.2415.4	chr12	+	3614	2	full-splice_match	GAPDH	ENST00000496049.1	390	2	5	-3229	5	-1	multi-exon	FALSE	canonical	1	22151966	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	2651	3511	15.0	0	True	AATAAA	-18
PB.11156.21	chr8	+	4894	5	novel_in_catalog	YTHDF3	novel	5193	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	436	junction_1	175504.7811720524	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	211	1815	15.0	2	True	AATAAA	-13
PB.11346.8	chr8	+	1829	11	incomplete-splice_match	PHF20L1	ENST00000220847.8	3297	20	-6	28377	-6	-1424	3prime_fragment	FALSE	canonical	1	98842	junction_1	64209.109210453935	NA	1	1	TRUE	NA	NA	NA	C	coding	500	1500	328	1827	75.0	-36	True	NA	NA
PB.11156.20	chr8	+	4443	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	84	636	-15	-295	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	242	1999	25.0	-6	True	AGTAAA	-21
PB.6828.8	chr2	+	3561	9	novel_in_catalog	GORASP2	novel	812	7	NA	NA	-14	-7	intron_retention	FALSE	canonical	1	538771	junction_1	362980.49584600184	NA	7	NA	TRUE	NA	NA	NA	C	coding	424	1275	1295	2569	50.0	-33	True	ATTAAA	-21
PB.8006.15	chr3	+	3624	18	full-splice_match	PDCD6IP	ENST00000307296.7	6161	18	247	2290	-12	944	multi-exon	FALSE	canonical	1	21513	junction_12	322790.17155091406	NA	1	1	TRUE	NA	NA	NA	C	coding	868	2607	131	2737	35.0	-35	True	AATAAA	-20
PB.7639.1	chr22	-	5158	8	full-splice_match	PPM1F	ENST00000263212.9	5143	8	-13	-2	-13	2	multi-exon	FALSE	canonical	1	211730	junction_1	50651.867518807805	NA	2	NA	TRUE	NA	NA	NA	C	coding	454	1365	120	1484	5.0	-3	True	AATAAA	-22
PB.6103.1	chr19	-	2359	1	antisense	novelGene_SAE1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.3263.20	chr13	-	6592	4	novel_not_in_catalog	ANKRD10	novel	2495	6	NA	NA	-1	-4122	intron_retention	TRUE	non_canonical	0	0	junction_1	234784.17564364654	NA	8	NA	TRUE	NA	NA	NA	C	coding	152	459	137	595	90.0	107	False	NA	NA
PB.5796.10	chr19	+	1875	3	incomplete-splice_match	TPM4	ENST00000591645.2	2031	5	4823	-57	4823	-2	5prime_fragment	FALSE	canonical	1	1814	junction_2	267152.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-9308	False	AATAAA	-17
PB.7639.5	chr22	-	2344	8	full-splice_match	PPM1F	ENST00000263212.9	5143	8	-20	2819	-20	886	multi-exon	FALSE	canonical	1	211730	junction_1	50651.867518807805	NA	2	NA	TRUE	NA	NA	NA	C	coding	454	1365	127	1491	25.0	-10	True	TTTAAA	-15
PB.8006.13	chr3	+	5738	18	full-splice_match	PDCD6IP	ENST00000307296.7	6161	18	428	-5	150	0	multi-exon	FALSE	canonical	1	21513	junction_12	322790.17155091406	NA	2	NA	TRUE	NA	NA	NA	C	coding	678	2037	520	2556	25.0	-183	False	AATAAA	-21
PB.8006.12	chr3	+	2915	6	incomplete-splice_match	PDCD6IP	ENST00000648706.1	6049	19	16	41040	16	1763	intron_retention	FALSE	canonical	1	536651	junction_3	66887.57937435021	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	139	954	60.0	-43	True	NA	NA
PB.8006.19	chr3	+	2364	14	novel_not_in_catalog	PDCD6IP	novel	6161	18	NA	NA	-9	539	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	334255.466895196	NA	3	NA	TRUE	NA	NA	NA	C	coding	584	1755	128	1882	10.0	-32	True	AATAAA	-15
PB.8006.18	chr3	+	2400	5	incomplete-splice_match	PDCD6IP	ENST00000648706.1	6049	19	27	42683	-9	120	intron_retention	FALSE	canonical	1	536651	junction_3	67182.5789379211	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	128	775	80.0	-32	True	AAAACA	-6
PB.9924.6	chr6	-	2719	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-9	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	337687.29984030715	NA	18	1	TRUE	NA	NA	NA	C	coding	448	1347	223	1569	25.0	-10	True	AATAAA	-21
PB.3454.9	chr14	-	3055	21	novel_not_in_catalog	DLGAP5	novel	2954	20	NA	NA	23	6	any annotated donor/acceptor	FALSE	canonical	1	968	junction_20	161138.64824097135	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	203	2731	30.0	-1	True	AATAAA	-18
PB.2508.6	chr12	-	2611	16	novel_not_in_catalog	SOX5	novel	6975	14	NA	NA	-37	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	8647.311211135067	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	149	2440	75.0	74	False	AATAGA	-22
PB.2508.7	chr12	-	2584	15	full-splice_match	SOX5	ENST00000545921.5	2589	15	5	0	5	0	multi-exon	FALSE	canonical	1	1291	junction_14	8097.005221130859	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	152	2413	75.0	4	True	AATAGA	-22
PB.2508.1	chr12	-	7162	16	novel_in_catalog	SOX5	novel	6975	14	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	163	junction_15	8618.728574447625	NA	5	1	TRUE	NA	NA	NA	C	coding	763	2292	150	2441	20.0	1	True	AATAAA	-27
PB.2508.2	chr12	-	7001	16	novel_in_catalog	SOX5	novel	6975	14	NA	NA	9	-140	combination_of_known_junctions	FALSE	canonical	1	163	junction_15	8618.728574447625	NA	5	1	TRUE	NA	NA	NA	C	coding	763	2292	131	2422	45.0	20	False	AATAAA	-27
PB.2508.3	chr12	-	2960	16	novel_not_in_catalog	SOX5	novel	6975	14	NA	NA	3	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	8647.311211135067	NA	2	NA	TRUE	NA	NA	NA	C	coding	763	2292	151	2442	75.0	2	True	NA	NA
PB.7262.26	chr20	-	5403	3	full-splice_match	RBM12	ENST00000374104.7	5213	3	-6	-184	-6	0	multi-exon	FALSE	canonical	1	91812	junction_2	271577.5	NA	1	1	TRUE	NA	NA	NA	C	coding	932	2799	223	3021	20.0	-7	True	ATTAAA	-22
PB.7262.25	chr20	-	5349	3	full-splice_match	RBM12	ENST00000374114.7	6662	3	13	1300	-3	-83	multi-exon	FALSE	canonical	1	290176	junction_2	172395.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	252	3050	40.0	-4	True	AATAAA	-22
PB.7880.1	chr22	+	2282	9	full-splice_match	SELENOO	ENST00000380903.6	2315	9	32	1	32	0	multi-exon	FALSE	canonical	1	104566	junction_1	113337.4742605022	NA	0	NA	TRUE	NA	NA	NA	A	coding	629	1890	138	2027	10.0	-22	True	AATAAA	-16
PB.7262.22	chr20	-	6332	4	novel_not_in_catalog	CPNE1	novel	2147	18	NA	NA	0	9964	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	259543.62419575377	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2526	249	2774	60.0	-1	True	AATAAA	-7
PB.7262.21	chr20	-	6563	3	full-splice_match	RBM12	ENST00000424458.5	1068	3	-11	-5484	0	-41	multi-exon	FALSE	canonical	1	20825	junction_2	307071.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	207	3005	60.0	-1	True	AATAAA	-7
PB.7262.20	chr20	-	6586	3	full-splice_match	RBM12	ENST00000374104.7	5213	3	-13	-1360	3	-41	multi-exon	FALSE	canonical	1	91812	junction_2	271577.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	230	3028	60.0	-14	True	AATAAA	-7
PB.3833.4	chr15	-	6404	32	full-splice_match	SPG11	ENST00000558319.5	6426	32	15	7	1	-6	multi-exon	FALSE	canonical	1	123825	junction_20	41794.54424168838	NA	1	NA	TRUE	NA	NA	NA	C	coding	2079	6240	17	6256	30.0	-2	True	AATAAA	-39
PB.3833.5	chr15	-	3630	21	incomplete-splice_match	SPG11	ENST00000558319.5	6426	32	-10	27207	-10	0	3prime_fragment	FALSE	canonical	1	123825	junction_9	39920.16833832242	NA	0	NA	TRUE	NA	NA	NA	C	coding	1196	3588	42	3629	25.0	-27	True	AATAAA	-20
PB.3833.6	chr15	-	4060	21	novel_not_in_catalog	SPG11	novel	7774	40	NA	NA	4	-3848	any annotated donor/acceptor	FALSE	canonical	1	4809	junction_1	57470.273237800946	NA	0	NA	TRUE	NA	NA	NA	C	coding	1210	3633	25	3657	15.0	-10	True	AATAAA	-17
PB.3833.7	chr15	-	2718	12	full-splice_match	SPG11	ENST00000559193.5	2579	12	0	-139	0	139	multi-exon	FALSE	canonical	1	127580	junction_11	44341.58371883232	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	12	2351	60.0	3	True	NA	NA
PB.3833.1	chr15	-	7788	40	full-splice_match	SPG11	ENST00000261866.11	7774	40	-13	-1	1	1	multi-exon	TRUE	canonical	1	123825	junction_28	55633.85217929541	NA	0	NA	TRUE	NA	NA	NA	C	coding	2443	7332	31	7362	20.0	-16	True	AATAAA	-18
PB.11769.2	chr9	-	4415	6	full-splice_match	RBM18	ENST00000417201.3	4974	6	-23	582	-23	-582	multi-exon	FALSE	canonical	1	264840	junction_2	32179.948280878267	NA	14	NA	TRUE	NA	NA	NA	C	coding	190	573	165	737	30.0	-42	False	NA	NA
PB.3833.8	chr15	-	2597	12	full-splice_match	SPG11	ENST00000559193.5	2579	12	-19	1	1	-1	multi-exon	FALSE	canonical	1	127580	junction_11	44341.58371883232	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	31	2370	25.0	-16	True	AATATA	-14
PB.3833.9	chr15	-	2347	12	full-splice_match	SPG11	ENST00000559193.5	2579	12	-18	250	-1	-250	multi-exon	FALSE	canonical	1	127580	junction_11	44341.58371883232	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2316	30	2345	40.0	-15	True	AATAAA	-21
PB.2740.2	chr12	+	6421	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	329	4501	-108	842	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	109	3801	100.0	-31	True	NA	NA
PB.2740.3	chr12	+	5297	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	324	5630	-113	-287	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	114	3806	35.0	-36	True	AATATA	-18
PB.2740.1	chr12	+	5515	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	401	5335	-36	8	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	3	NA	TRUE	NA	NA	NA	C	coding	1230	3693	37	3729	35.0	-2	True	AATAAA	-25
PB.2740.6	chr12	+	4470	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	323	6458	-114	-1115	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	115	3807	50.0	-37	True	AATATA	-7
PB.2740.7	chr12	+	5126	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	324	5801	-113	-458	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	114	3806	40.0	-36	True	AATAAA	-22
PB.2740.4	chr12	+	7243	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	351	3657	-86	1686	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	1	NA	TRUE	NA	NA	NA	C	coding	1230	3693	87	3779	35.0	-9	True	AATAAA	-32
PB.2740.5	chr12	+	5775	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	360	5116	-77	227	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	1	NA	TRUE	NA	NA	NA	C	coding	1230	3693	78	3770	20.0	0	True	AATAGA	-18
PB.2740.8	chr12	+	4180	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	351	6720	-86	-1377	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	87	3779	35.0	-9	True	TATAAA	-33
PB.2740.9	chr12	+	4618	15	full-splice_match	CAND1	ENST00000545606.5	11251	15	360	6273	-77	-930	multi-exon	FALSE	canonical	1	429860	junction_2	257559.14494530996	NA	1	NA	TRUE	NA	NA	NA	C	coding	1230	3693	78	3770	35.0	0	True	TATAAA	-11
PB.7403.11	chr20	+	2296	32	full-splice_match	COL9A3	ENST00000649368.1	2497	32	0	201	0	-186	multi-exon	FALSE	canonical	1	47673	junction_1	46124.37463912283	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	16	2070	30.0	0	True	AATAAA	-19
PB.7403.10	chr20	+	2285	31	novel_in_catalog	COL9A3	novel	635	12	NA	NA	0	-50	no_combination_of_known_junctions	FALSE	canonical	1	4844	junction_27	50006.84088967784	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	16	1923	35.0	0	True	AATAAA	-21
PB.7403.13	chr20	+	2433	31	novel_not_in_catalog	COL9A3	novel	635	12	NA	NA	2	2	any annotated donor/acceptor	FALSE	canonical	1	1243	junction_27	50325.10458316671	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	14	1474	20.0	2	True	AATAAA	-34
PB.7403.12	chr20	+	2525	33	novel_not_in_catalog	COL9A3	novel	635	12	NA	NA	2	-53	any annotated donor/acceptor	FALSE	canonical	1	29	junction_27	57053.5954062261	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	14	1708	35.0	2	True	AATAAA	-18
PB.7403.15	chr20	+	3159	30	novel_in_catalog	COL9A3	novel	635	12	NA	NA	-7	-4	intron_retention	FALSE	canonical	1	88382	junction_1	44034.10144870414	NA	3	NA	TRUE	NA	NA	NA	C	coding	383	1152	1585	2736	35.0	-7	True	AATAAA	-28
PB.7403.14	chr20	+	2623	32	full-splice_match	COL9A3	ENST00000343916.7	2485	32	1	-139	1	139	multi-exon	FALSE	canonical	1	47673	junction_1	46124.37463912283	NA	3	NA	TRUE	NA	NA	NA	C	coding	684	2055	3	2057	40.0	13	True	AGTAAA	-20
PB.7403.17	chr20	+	2599	32	novel_not_in_catalog	COL9A3	novel	635	12	NA	NA	-11	-4	any annotated donor/acceptor	FALSE	canonical	1	505	junction_4	55734.79655469028	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	329	2176	35.0	-11	True	AATAAA	-28
PB.7403.16	chr20	+	2475	31	incomplete-splice_match	COL9A3	ENST00000343916.7	2485	32	369	65	-12	-50	5prime_fragment	FALSE	canonical	1	88382	junction_1	43297.21408338211	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	620	2113	35.0	-12	True	AATAAA	-21
PB.7403.19	chr20	+	2464	30	novel_in_catalog	COL9A3	novel	635	12	NA	NA	-7	1	no_combination_of_known_junctions	FALSE	canonical	1	2045	junction_2	51029.493860697396	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	543	2036	25.0	-7	True	AATAAA	-33
PB.7403.18	chr20	+	2418	30	novel_in_catalog	COL9A3	novel	635	12	NA	NA	-11	-52	no_combination_of_known_junctions	FALSE	canonical	1	91	junction_7	51242.182464838574	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	565	2058	35.0	-11	True	AATAAA	-19
PB.11423.4	chr9	+	5669	10	novel_not_in_catalog	KANK1	novel	5581	16	NA	NA	167	0	intron_retention	FALSE	canonical	1	14463	junction_1	93525.336935183	NA	0	NA	TRUE	NA	NA	NA	B	coding	1206	3621	634	4254	5.0	3	True	AATAAA	-16
PB.118.6	chr1	-	2218	10	full-splice_match	FBXO42	ENST00000375592.7	6202	10	168	3816	168	427	multi-exon	FALSE	canonical	1	111657	junction_9	39564.93740986978	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	50	2203	0.0	186	False	NA	NA
PB.773.3	chr1	-	1050	5	full-splice_match	JTB	ENST00000271843.8	1287	5	-6	243	-6	0	multi-exon	FALSE	canonical	1	2209228	junction_3	403574.4453693612	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	443	883	10.0	1	True	AATAAA	-15
PB.773.2	chr1	-	1627	3	incomplete-splice_match	JTB	ENST00000271843.8	1287	5	14	2	14	-2	intron_retention	FALSE	canonical	1	2814429	junction_1	223469.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	866	1219	25.0	-1	True	AATAAA	-19
PB.773.1	chr1	-	1258	5	full-splice_match	JTB	ENST00000271843.8	1287	5	30	-1	2	1	multi-exon	FALSE	canonical	1	2209228	junction_3	403574.4453693612	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	407	847	20.0	15	True	AATAAA	-22
PB.118.7	chr1	-	2286	9	novel_in_catalog	FBXO42	novel	6202	10	NA	NA	-18	426	no_combination_of_known_junctions	FALSE	canonical	1	4231	junction_7	77222.91113717483	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	236	2272	0.0	0	True	NA	NA
PB.4735.1	chr17	+	1984	2	full-splice_match	TMEM102	ENST00000396568.1	1962	2	-23	1	-12	-1	multi-exon	FALSE	canonical	1	106450	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	508	1527	442	1968	20.0	-4	True	ATTAAA	-16
PB.773.5	chr1	-	1381	3	incomplete-splice_match	JTB	ENST00000368589.5	1216	4	-10	1	-10	-1	intron_retention	FALSE	canonical	1	2814429	junction_1	223469.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	117	354	862	1215	10.0	3	True	AATAAA	-14
PB.773.4	chr1	-	2173	2	incomplete-splice_match	JTB	ENST00000368589.5	1216	4	-14	0	14	0	intron_retention	FALSE	canonical	1	2814429	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-15
PB.6113.4	chr19	-	5406	27	novel_in_catalog	LIG1	novel	3384	28	NA	NA	0	0	intron_retention	FALSE	canonical	1	198353	junction_4	99895.47419524964	NA	15	2	TRUE	NA	NA	NA	C	coding	527	1584	3620	5203	15.0	-1	True	NA	NA
PB.6113.5	chr19	-	3035	27	novel_in_catalog	LIG1	novel	3384	28	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	21973	junction_25	124402.67032946709	NA	0	NA	TRUE	NA	NA	NA	C	coding	889	2670	164	2833	15.0	-3	True	NA	NA
PB.9587.1	chr5	+	733	7	full-splice_match	MRPL22	ENST00000523037.5	3176	7	0	2443	0	2	multi-exon	FALSE	canonical	1	721742	junction_3	142381.63543097823	NA	1	NA	TRUE	NA	NA	NA	A	coding	206	621	42	662	25.0	-23	True	AATAAA	-15
PB.6113.1	chr19	-	4136	28	full-splice_match	LIG1	ENST00000594759.5	4102	28	-30	-4	-12	0	multi-exon	FALSE	canonical	1	44676	junction_4	124185.68819128007	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	174	2576	15.0	-13	True	NA	NA
PB.6113.2	chr19	-	3414	28	full-splice_match	LIG1	ENST00000263274.11	3384	28	-36	6	-36	-1	multi-exon	FALSE	canonical	1	198353	junction_4	101054.92017636674	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	457	3216	20.0	-296	False	NA	NA
PB.6113.3	chr19	-	3028	27	novel_in_catalog	LIG1	novel	3384	28	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	9485	junction_21	122487.02653642633	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	174	2825	15.0	-13	True	NA	NA
PB.5166.9	chr17	+	2722	8	full-splice_match	METTL2A	ENST00000333483.14	1556	8	13	-1179	-3	0	multi-exon	FALSE	canonical	1	2150	junction_3	210581.60596203798	NA	6	NA	TRUE	NA	NA	NA	C	coding	242	729	630	1358	90.0	NA	False	NA	NA
PB.5166.8	chr17	+	3322	9	full-splice_match	METTL2A	ENST00000311506.9	2537	9	21	-806	-3	77	multi-exon	FALSE	canonical	1	2150	junction_4	198042.23989779144	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	16	1152	30.0	NA	False	AATAAA	-18
PB.945.1	chr1	+	1741	1	antisense	novelGene_RC3H1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.118.2	chr1	-	3000	9	novel_in_catalog	FBXO42	novel	6202	10	NA	NA	11	570	intron_retention	FALSE	canonical	1	111657	junction_8	41963.0832786391	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	1637	2842	70.0	29	True	NA	NA
PB.750.3	chr1	-	5160	19	full-splice_match	POGZ	ENST00000271715.6	6626	19	-34	1500	-34	0	multi-exon	FALSE	canonical	1	59177	junction_18	95501.57162472882	NA	1	NA	TRUE	NA	NA	NA	C	coding	1410	4233	350	4582	50.0	-56	True	TATAAA	-11
PB.5166.1	chr17	+	1565	8	full-splice_match	METTL2A	ENST00000333483.14	1556	8	-6	-3	2	3	multi-exon	TRUE	canonical	1	2150	junction_3	210581.60596203798	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	649	1377	80.0	NA	False	NA	NA
PB.5166.3	chr17	+	1342	9	full-splice_match	METTL2A	ENST00000311506.9	2537	9	19	1176	-5	3	multi-exon	FALSE	canonical	1	2150	junction_4	198042.23989779144	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	18	1154	80.0	NA	False	NA	NA
PB.5166.2	chr17	+	2523	9	full-splice_match	METTL2A	ENST00000311506.9	2537	9	14	0	6	0	multi-exon	FALSE	canonical	1	2150	junction_4	198042.23989779144	NA	27	NA	TRUE	NA	NA	NA	C	coding	378	1137	23	1159	90.0	NA	False	NA	NA
PB.5166.5	chr17	+	2117	10	novel_not_in_catalog	METTL2A	novel	2537	9	NA	NA	-5	2563	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	194856.30074651752	NA	2	NA	TRUE	NA	NA	NA	C	coding	378	1137	18	1154	20.0	NA	False	AATAAA	-16
PB.5166.4	chr17	+	2340	8	full-splice_match	METTL2A	ENST00000333483.14	1556	8	11	-795	-5	-384	multi-exon	FALSE	canonical	1	2150	junction_3	210581.60596203798	NA	5	NA	TRUE	NA	NA	NA	C	coding	242	729	632	1360	90.0	NA	False	NA	NA
PB.5166.7	chr17	+	2342	9	full-splice_match	METTL2A	ENST00000311506.9	2537	9	20	175	-4	-175	multi-exon	FALSE	canonical	1	2150	junction_4	198042.23989779144	NA	3	NA	TRUE	NA	NA	NA	C	coding	378	1137	17	1153	70.0	NA	False	NA	NA
PB.5166.6	chr17	+	1991	8	full-splice_match	METTL2A	ENST00000333483.14	1556	8	11	-446	-5	446	multi-exon	FALSE	canonical	1	2150	junction_3	210581.60596203798	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	632	1360	45.0	NA	False	NA	NA
PB.714.2	chr1	-	3754	14	novel_not_in_catalog	MTMR11	novel	1928	10	NA	NA	-10	0	intron_retention	FALSE	canonical	1	18182	junction_2	17448.494371897934	NA	4	NA	TRUE	NA	NA	NA	C	coding	412	1239	198	1436	10.0	34	True	ATTAAA	-18
PB.11078.2	chr8	+	5086	35	full-splice_match	WRN	ENST00000298139.5	5215	35	-10	139	-10	-133	multi-exon	FALSE	canonical	1	80082	junction_5	25497.346629576754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1432	4299	260	4558	60.0	-46	True	AATGAA	-21
PB.11078.1	chr8	+	7403	35	full-splice_match	WRN	ENST00000298139.5	5215	35	-44	-2144	-44	2144	multi-exon	FALSE	canonical	1	80082	junction_5	25497.346629576754	NA	2	NA	TRUE	NA	NA	NA	C	coding	1432	4299	294	4592	25.0	-112	False	NA	NA
PB.714.1	chr1	-	2841	17	full-splice_match	MTMR11	ENST00000439741.3	2827	17	-12	-2	-10	1	multi-exon	FALSE	canonical	1	36742	junction_16	20200.189361736193	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	233	2362	5.0	-1	True	ATTAAA	-20
PB.11078.7	chr8	+	5324	36	novel_not_in_catalog	WRN	novel	5215	35	NA	NA	6	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	41631.82552666227	NA	8	1	TRUE	NA	NA	NA	C	coding	1362	4089	584	4672	40.0	-30	True	AATAAA	-19
PB.11078.6	chr8	+	5187	35	full-splice_match	WRN	ENST00000298139.5	5215	35	20	8	20	-2	multi-exon	FALSE	canonical	1	80082	junction_5	25497.346629576754	NA	10	2	TRUE	NA	NA	NA	C	coding	1432	4299	230	4528	25.0	-16	True	AATAAA	-26
PB.11078.5	chr8	+	1385	9	incomplete-splice_match	WRN	ENST00000298139.5	5215	35	4	92602	4	-43798	3prime_fragment	FALSE	canonical	1	80082	junction_5	22218.63069025632	NA	1	NA	TRUE	NA	NA	NA	C	coding	380	1140	246	1385	60.0	-32	True	AATAAA	-43
PB.11078.4	chr8	+	7127	36	novel_not_in_catalog	WRN	novel	5215	35	NA	NA	3	2144	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_35	32246.81951302029	NA	2	NA	TRUE	NA	NA	NA	C	coding	1432	4299	247	4545	25.0	-33	True	NA	NA
PB.177.12	chr1	+	2598	4	full-splice_match	SRRM1	ENST00000462710.5	2624	4	-5	31	0	23	multi-exon	FALSE	canonical	1	281393	junction_2	163496.98862534304	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-14	True	NA	NA
PB.9817.2	chr6	+	3216	1	genic	ZKSCAN8	novel	NA	NA	NA	NA	-69	-8023	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	122	369	27	395	75.0	-42	True	NA	NA
PB.5457.11	chr18	+	6153	25	full-splice_match	PIK3C3	ENST00000262039.8	9443	25	34	3256	6	3095	multi-exon	FALSE	canonical	1	181952	junction_5	36178.90426600686	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	53	2716	85.0	-6	True	NA	NA
PB.9817.4	chr6	+	3042	1	genic	ZKSCAN8	novel	NA	NA	NA	NA	-58	-8186	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	122	369	16	384	65.0	-31	True	NA	NA
PB.9817.5	chr6	+	7434	6	full-splice_match	ZKSCAN8	ENST00000606198.5	2057	6	-27	-5350	-27	-11	multi-exon	FALSE	canonical	1	13306	junction_2	58905.14277242692	NA	42	1	TRUE	NA	NA	NA	C	coding	391	1176	815	1990	10.0	0	True	NA	NA
PB.9817.6	chr6	+	7426	6	full-splice_match	ZKSCAN8	ENST00000330236.6	7376	6	-54	4	-26	-4	multi-exon	FALSE	canonical	1	62327	junction_1	35984.272639029405	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	239	1975	20.0	1	True	NA	NA
PB.1266.8	chr10	+	2326	16	novel_in_catalog	GTPBP4	novel	5075	17	NA	NA	-27	496	no_combination_of_known_junctions	FALSE	canonical	1	15670	junction_8	243365.35794580312	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	46	1860	20.0	-27	True	AATAAA	-18
PB.1266.9	chr10	+	2153	17	full-splice_match	GTPBP4	ENST00000360803.8	5075	17	417	2505	-26	234	multi-exon	FALSE	canonical	1	567439	junction_1	133619.8808418253	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	45	1949	30.0	-26	True	NA	NA
PB.1266.6	chr10	+	1405	14	incomplete-splice_match	GTPBP4	ENST00000360803.8	5075	17	416	7456	-27	1963	3prime_fragment	FALSE	canonical	1	567439	junction_1	109174.19433771858	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1359	46	1404	60.0	-27	True	AAGAAA	-14
PB.4195.1	chr16	+	1434	13	full-splice_match	THOC6	ENST00000326266.12	1419	13	-19	4	-15	1	multi-exon	FALSE	canonical	1	298593	junction_1	149226.59703916352	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	316	1341	10.0	-52	True	AATAAA	-17
PB.4195.2	chr16	+	1550	11	novel_in_catalog	THOC6	novel	960	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	298593	junction_1	154420.8911580619	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	890	1459	15.0	-12	True	AATAAA	-15
PB.1266.5	chr10	+	2458	17	full-splice_match	GTPBP4	ENST00000360803.8	5075	17	437	2180	-6	559	multi-exon	FALSE	canonical	1	567439	junction_1	133619.8808418253	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	25	1929	45.0	-6	True	AATAAA	-2
PB.11109.10	chr8	-	3403	13	novel_in_catalog	PLAT	novel	2599	15	NA	NA	0	-2	intron_retention	FALSE	canonical	1	466569	junction_7	71404.38934624202	NA	75	4	TRUE	NA	NA	NA	C	coding	492	1479	99	1577	40.0	-1	True	AATAAA	-26
PB.1266.3	chr10	+	2483	16	novel_in_catalog	GTPBP4	novel	5075	17	NA	NA	-31	486	intron_retention	FALSE	canonical	1	567439	junction_1	137466.22729551513	NA	3	NA	TRUE	NA	NA	NA	C	coding	518	1557	471	2027	40.0	-31	True	AATAAA	-8
PB.11109.12	chr8	-	1801	13	incomplete-splice_match	PLAT	ENST00000220809.8	2706	14	161	3489	2	1361	3prime_fragment	FALSE	canonical	1	466569	junction_7	70372.65889785725	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	97	1782	50.0	1	True	AATAAA	-19
PB.1266.1	chr10	+	4675	17	full-splice_match	GTPBP4	ENST00000360803.8	5075	17	392	8	-51	-8	multi-exon	FALSE	canonical	1	567439	junction_1	133619.8808418253	NA	2	NA	TRUE	NA	NA	NA	C	coding	634	1905	70	1974	35.0	-728	False	AATAAA	-19
PB.3648.1	chr14	+	1774	1	antisense	novelGene_SYNE3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	CATAAA	-4
PB.4076.1	chr15	+	2251	2	full-splice_match	NGRN	ENST00000331497.3	2784	2	0	533	0	-533	multi-exon	FALSE	canonical	1	1180058	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	682	1341	30.0	-13	True	NA	NA
PB.4076.2	chr15	+	2771	2	full-splice_match	NGRN	ENST00000331497.3	2784	2	13	0	13	0	multi-exon	FALSE	canonical	1	1180058	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	669	1328	25.0	0	True	ATTAAA	-16
PB.4076.3	chr15	+	1339	3	full-splice_match	NGRN	ENST00000379095.4	7237	3	-32	5930	14	-1020	multi-exon	FALSE	canonical	1	130434	junction_1	524812.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	41	916	0.0	1	True	AATAAA	-17
PB.4076.4	chr15	+	1648	2	full-splice_match	NGRN	ENST00000331497.3	2784	2	115	1021	69	-1021	multi-exon	FALSE	canonical	1	1180058	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	219	660	567	1226	0.0	-9700	False	AATAAA	-16
PB.4076.5	chr15	+	2755	3	novel_not_in_catalog	AC091167.2	novel	3838	13	NA	NA	16134	5665	intron_retention	FALSE	non_canonical	0	0	junction_2	6650.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-3	True	AATAAA	-17
PB.11046.4	chr8	+	2260	6	full-splice_match	BNIP3L	ENST00000380629.6	3610	6	148	1202	-8	879	multi-exon	FALSE	canonical	1	972232	junction_1	503860.3180632505	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	86	745	20.0	-22	True	AATAAA	-14
PB.10742.1	chr7	-	2058	3	novel_not_in_catalog	VGF	novel	2575	2	NA	NA	-11	0	intron_retention	TRUE	non_canonical	0	0	junction_1	95127.0	NA	1	1	TRUE	NA	NA	NA	B	coding	451	1356	217	1572	15.0	-1	True	AATAAA	-19
PB.10742.2	chr7	-	2036	3	novel_not_in_catalog	VGF	novel	2575	2	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	95127.0	NA	2	1	TRUE	NA	NA	NA	B	coding	501	1506	217	1722	15.0	-1	True	AATAAA	-19
PB.10742.3	chr7	-	1791	4	novel_not_in_catalog	VGF	novel	2575	2	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	89686.59569857694	NA	0	NA	TRUE	NA	NA	NA	B	coding	362	1089	217	1305	15.0	-1	True	AATAAA	-19
PB.10742.4	chr7	-	1995	4	novel_not_in_catalog	VGF	novel	2575	2	NA	NA	-9	0	intron_retention	TRUE	non_canonical	0	0	junction_1	89686.59569857694	NA	0	NA	TRUE	NA	NA	NA	B	coding	510	1533	155	1687	15.0	1	True	AATAAA	-13
PB.10742.5	chr7	-	1994	3	novel_not_in_catalog	VGF	novel	2575	2	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	95127.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	432	1299	217	1515	15.0	-1	True	AATAAA	-12
PB.11046.2	chr8	+	3440	6	full-splice_match	BNIP3L	ENST00000380629.6	3610	6	169	1	13	-1	multi-exon	FALSE	canonical	1	972232	junction_1	503860.3180632505	NA	59	NA	TRUE	NA	NA	NA	C	coding	219	660	65	724	20.0	-1	True	ATTAAA	-17
PB.11046.3	chr8	+	1544	6	full-splice_match	BNIP3L	ENST00000380629.6	3610	6	143	1923	-13	158	multi-exon	FALSE	canonical	1	972232	junction_1	503860.3180632505	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	91	750	10.0	-27	True	AATATA	-14
PB.720.7	chr1	-	1814	4	novel_in_catalog	APH1A	novel	1718	6	NA	NA	5	-1	intron_retention	FALSE	canonical	1	23565	junction_3	1031610.7108434311	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	3	True	AATAAA	-11
PB.858.6	chr1	-	1863	8	full-splice_match	SLAMF1	ENST00000538290.2	1087	8	-112	-664	-49	78	multi-exon	FALSE	canonical	1	5587	junction_4	111335.67116918943	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	126	1199	25.0	-27	False	AATAAA	-19
PB.7407.1	chr20	-	2259	2	intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	170	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.720.6	chr1	-	1899	5	full-splice_match	APH1A	ENST00000236017.5	663	5	2	-1238	2	-1	multi-exon	FALSE	canonical	1	57368	junction_4	895041.5941380531	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	212	784	20.0	-8	True	AATAAA	-11
PB.2794.1	chr12	+	3097	1	intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-783	False	NA	NA
PB.3400.1	chr14	-	2970	4	novel_not_in_catalog	LINC02302	novel	2904	4	NA	NA	29	-6	any annotated donor/acceptor	FALSE	canonical	1	525	junction_3	1168.479448780432	NA	5	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	105	False	AATAAA	-6
PB.1978.1	chr11	-	1632	1	novel_in_catalog	TMEM258	novel	575	4	NA	NA	0	-874	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-4	True	NA	NA
PB.71.1	chr1	+	2983	1	novel_in_catalog	LNCTAM34A	novel	888	3	NA	NA	197	-6584	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-8647	False	TATAAA	-17
PB.720.4	chr1	-	1948	7	novel_not_in_catalog	APH1A	novel	1718	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	778388.2555147741	NA	1	1	TRUE	NA	NA	NA	C	coding	247	744	89	832	20.0	-2	True	AATAAA	-12
PB.1822.18	chr11	+	5059	28	full-splice_match	USP47	ENST00000527733.5	4525	28	-3	-531	-3	7	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	215	4282	30.0	-3	True	AATAAA	-32
PB.11240.13	chr8	-	4447	4	full-splice_match	RAD54B	ENST00000297592.5	1879	4	-53	-2515	-6	2515	multi-exon	FALSE	canonical	1	33331	junction_1	33425.5078146416	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	485	961	65.0	-1	True	NA	NA
PB.1822.19	chr11	+	4078	27	full-splice_match	USP47	ENST00000339865.9	7775	27	550	3147	-2	-245	multi-exon	FALSE	canonical	1	48142	junction_1	112554.38039683213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1287	3864	214	4077	20.0	-2	True	AATAAA	-20
PB.762.1	chr1	+	609	3	full-splice_match	S100A1	ENST00000292169.5	594	3	-16	1	-3	-1	multi-exon	FALSE	canonical	1	1521682	junction_2	15871.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	94	285	130	414	10.0	-5699	False	ATTAAA	-18
PB.1076.5	chr1	-	1965	15	novel_in_catalog	EIF2D	novel	750	6	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	32629	junction_11	181303.12587899555	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	547	1836	20.0	-4	True	AATAAA	-15
PB.762.2	chr1	+	3632	1	novel_in_catalog	S100A1	novel	2621	2	NA	NA	8	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	120	363	597	959	10.0	-33	True	ATTAAA	-18
PB.2906.6	chr12	-	4082	25	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	25948	junction_7	127323.8613990967	NA	1	NA	TRUE	NA	NA	NA	C	coding	1148	3447	275	3721	100.0	-16	True	NA	NA
PB.2906.7	chr12	-	3957	23	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	2611	junction_6	118290.51423596348	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2508	250	2757	100.0	9	True	NA	NA
PB.2906.4	chr12	-	3962	24	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	47199	junction_23	121358.9474932958	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	308	3679	100.0	-2	True	NA	NA
PB.2906.5	chr12	-	4049	24	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	47199	junction_23	114869.37044747006	NA	2	1	TRUE	NA	NA	NA	C	coding	1137	3414	275	3688	100.0	-16	True	NA	NA
PB.2906.2	chr12	-	4287	25	full-splice_match	ATXN2	ENST00000389153.9	3854	25	-485	52	-31	2	multi-exon	FALSE	canonical	1	47199	junction_24	114184.94065975698	NA	1	NA	TRUE	NA	NA	NA	C	coding	1155	3468	274	3741	80.0	-15	True	NA	NA
PB.2906.3	chr12	-	3980	24	novel_not_in_catalog	ATXN2	novel	2167	13	NA	NA	-31	2	any annotated donor/acceptor	FALSE	canonical	1	13094	junction_13	130601.2641252866	NA	4	1	TRUE	NA	NA	NA	C	coding	1079	3240	274	3513	80.0	-15	True	NA	NA
PB.2906.1	chr12	-	4266	24	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	1	47199	junction_23	114869.37044747006	NA	3	1	TRUE	NA	NA	NA	C	coding	1137	3414	307	3720	80.0	-1	True	NA	NA
PB.7051.1	chr2	-	3263	13	full-splice_match	DNER	ENST00000341772.4	3260	13	-4	1	-4	-1	multi-exon	FALSE	canonical	1	114492	junction_12	59906.63141662616	NA	0	NA	TRUE	NA	NA	NA	A	coding	737	2214	140	2353	10.0	-33	True	AATAAA	-17
PB.2906.8	chr12	-	3913	23	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	47199	junction_22	123029.24458987535	NA	2	1	TRUE	NA	NA	NA	C	coding	1107	3324	308	3631	100.0	-2	True	NA	NA
PB.2906.9	chr12	-	3864	23	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	1	16753	junction_12	127549.79092929725	NA	1	NA	TRUE	NA	NA	NA	C	coding	1071	3216	288	3503	100.0	239	False	NA	NA
PB.780.65	chr1	-	2138	1	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-61	-318	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	239	720	877	1596	75.0	6086	False	NA	NA
PB.1408.12	chr10	+	4620	31	novel_not_in_catalog	WASHC2A	novel	4417	28	NA	NA	2	1	any annotated donor/acceptor	FALSE	canonical	1	2302	junction_9	69167.08896244579	NA	0	NA	TRUE	NA	NA	NA	C	coding	1254	3765	298	4062	25.0	-28	False	NA	NA
PB.1408.13	chr10	+	4234	30	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2302	junction_9	69966.70047929639	NA	36	6	TRUE	NA	NA	NA	C	coding	1317	3954	80	4033	5.0	-27	False	AATAAA	-13
PB.1408.10	chr10	+	2680	24	incomplete-splice_match	WASHC2A	ENST00000282633.9	4272	31	-40	7917	-2	-1279	3prime_fragment	FALSE	canonical	1	2302	junction_9	77259.857499378	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2595	86	2680	50.0	-33	False	NA	NA
PB.1408.11	chr10	+	4518	30	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	223	junction_21	70100.96189147046	NA	1	NA	TRUE	NA	NA	NA	C	coding	1290	3873	83	3955	20.0	-30	False	NA	NA
PB.1408.16	chr10	+	3219	26	incomplete-splice_match	WASHC2A	ENST00000282633.9	4272	31	-9	6613	-9	25	3prime_fragment	FALSE	canonical	1	2302	junction_9	74693.26055484258	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	55	2883	10.0	-2	True	NA	NA
PB.6471.8	chr2	-	2291	15	incomplete-splice_match	MTIF2	ENST00000263629.8	2528	16	-15	719	-15	-718	3prime_fragment	FALSE	canonical	1	106795	junction_2	91750.57024126302	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	332	2290	80.0	81	False	AAAAAG	-40
PB.1408.14	chr10	+	4566	30	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	2302	junction_9	69421.16862511788	NA	26	6	TRUE	NA	NA	NA	C	coding	1312	3939	71	4009	30.0	-18	False	NA	NA
PB.1408.15	chr10	+	4297	31	full-splice_match	WASHC2A	ENST00000282633.9	4272	31	-25	0	12	0	multi-exon	FALSE	canonical	1	2302	junction_9	69026.29363418132	NA	1	NA	TRUE	NA	NA	NA	C	coding	1341	4026	71	4096	5.0	-18	False	AATAAA	-13
PB.6471.5	chr2	-	2773	16	novel_not_in_catalog	MTIF2	novel	2386	15	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	1	630	junction_15	130329.00002965146	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	565	2748	20.0	146	False	ATTAAA	-14
PB.6471.4	chr2	-	2508	16	full-splice_match	MTIF2	ENST00000263629.8	2528	16	18	2	-13	-1	multi-exon	FALSE	canonical	1	106795	junction_3	101049.9841100433	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	299	2482	20.0	-3	True	ATTAAA	-15
PB.6471.7	chr2	-	2432	16	novel_in_catalog	MTIF2	novel	2386	15	NA	NA	-18	-718	combination_of_known_junctions	FALSE	canonical	1	18454	junction_12	134159.64369455105	NA	1	1	TRUE	NA	NA	NA	C	coding	653	1959	473	2431	80.0	78	False	AAAAAG	-40
PB.6471.6	chr2	-	2607	17	novel_not_in_catalog	MTIF2	novel	2386	15	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	canonical	1	3527	junction_14	145578.39988440025	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	400	2583	15.0	5	True	ATTAAA	-13
PB.6471.1	chr2	-	2689	17	novel_in_catalog	MTIF2	novel	2386	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	18454	junction_13	141623.11639324136	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	479	2662	15.0	72	False	ATTAAA	-16
PB.6471.3	chr2	-	2712	16	novel_not_in_catalog	MTIF2	novel	2386	15	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	7149	junction_12	128860.45920341722	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	791	2686	20.0	-15	True	ATTAAA	-15
PB.6471.2	chr2	-	2439	15	novel_in_catalog	MTIF2	novel	2386	15	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	872	junction_13	133756.12644469706	NA	7	NA	TRUE	NA	NA	NA	C	coding	727	2184	229	2412	15.0	0	True	ATTAAA	-16
PB.11226.24	chr8	-	4160	13	novel_in_catalog	NBN	novel	4666	16	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	1	8367	junction_3	189390.74784658535	NA	4	NA	TRUE	NA	NA	NA	C	coding	594	1785	281	2065	15.0	-39	True	NA	NA
PB.1155.23	chr1	-	2760	13	novel_in_catalog	LBR	novel	3745	14	NA	NA	-37	692	no_combination_of_known_junctions	FALSE	canonical	1	54846	junction_4	212072.90908788893	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	134	1855	70.0	-35	True	TATAAA	-12
PB.1395.9	chr10	+	3897	30	incomplete-splice_match	WASHC2C	ENST00000623400.3	4616	31	-16	2462	12	-2127	3prime_fragment	FALSE	canonical	1	872	junction_5	112236.30687791425	NA	9	3	TRUE	NA	NA	NA	C	coding	1275	3825	71	3895	65.0	-18	True	NA	NA
PB.940.10	chr1	+	2388	11	novel_in_catalog	KLHL20	novel	450	4	NA	NA	6	226	no_combination_of_known_junctions	FALSE	canonical	1	619	junction_1	60850.44399377871	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	121	1896	80.0	9	True	NA	NA
PB.65.1	chr1	-	1906	1	antisense	novelGene_PARK7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6594.14	chr2	+	3631	7	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1071348	junction_3	438029.0672986846	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	121	759	20.0	0	True	AATAAA	-18
PB.191.1	chr1	-	1769	9	full-splice_match	TRIM63	ENST00000374272.3	1770	9	-2	3	-2	-3	multi-exon	FALSE	canonical	1	126736	junction_7	25095.887573651882	NA	2	NA	TRUE	NA	NA	NA	A	coding	353	1062	142	1203	25.0	-6	True	AATAAA	-27
PB.1395.5	chr10	+	4494	29	full-splice_match	WASHC2C	ENST00000540872.6	4327	29	-8	-159	-8	2	multi-exon	FALSE	canonical	1	67	junction_25	114697.4453019147	NA	1	NA	TRUE	NA	NA	NA	C	coding	1279	3840	92	3931	20.0	-39	False	NA	NA
PB.6848.2	chr2	+	3380	7	novel_in_catalog	SCRN3	novel	1141	7	NA	NA	-1	495	combination_of_known_junctions	FALSE	canonical	1	9929	junction_1	71522.62008778917	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	171	1205	15.0	-10	True	NA	NA
PB.1395.4	chr10	+	4177	30	novel_in_catalog	WASHC2C	novel	4471	29	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	128	junction_21	112301.66801249051	NA	12	3	TRUE	NA	NA	NA	C	coding	1290	3873	104	3976	5.0	-51	False	AATAAA	-13
PB.446.8	chr1	-	2740	16	full-splice_match	DOCK7	ENST00000404627.3	2678	16	-63	1	-63	-1	multi-exon	FALSE	canonical	1	10721	junction_1	47841.159850581476	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	168	2066	25.0	112	False	NA	NA
PB.1395.7	chr10	+	4267	31	novel_not_in_catalog	WASHC2C	novel	4471	29	NA	NA	-5	-4	any annotated donor/acceptor	FALSE	canonical	1	872	junction_5	112353.94153548864	NA	0	NA	TRUE	NA	NA	NA	C	coding	1254	3765	306	4070	5.0	-36	False	AATAAA	-9
PB.8954.5	chr4	-	3953	23	novel_not_in_catalog	SEC24D	novel	4030	23	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	4637	junction_19	126831.49282616048	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	233	3262	30.0	-10	True	AATAAA	-18
PB.8954.4	chr4	-	4160	24	novel_not_in_catalog	SEC24D	novel	4030	23	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	2403	junction_1	155608.67875640417	NA	0	NA	TRUE	NA	NA	NA	C	coding	1010	3033	249	3281	30.0	-26	True	AATAAA	-18
PB.8954.7	chr4	-	6182	21	novel_in_catalog	SEC24D	novel	4030	23	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	188245	junction_20	84855.48868729707	NA	1	1	TRUE	NA	NA	NA	C	coding	763	2292	249	2540	30.0	-26	True	AATAAA	-18
PB.1395.6	chr10	+	5994	30	novel_in_catalog	WASHC2C	novel	4471	29	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	872	junction_4	112591.3096913218	NA	7	NA	TRUE	NA	NA	NA	C	coding	1254	3765	1673	5437	30.0	-37	False	NA	NA
PB.6204.3	chr19	+	2848	18	full-splice_match	CNOT3	ENST00000221232.10	2890	18	39	3	-6	-3	multi-exon	FALSE	canonical	1	148882	junction_1	147139.01287675547	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	289	2550	20.0	-6	True	AATAAA	-38
PB.6204.2	chr19	+	2907	18	novel_in_catalog	CNOT3	novel	2890	18	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	1	20632	junction_17	200156.57863433336	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	316	2631	10.0	-128	False	AATAAA	-16
PB.6204.1	chr19	+	3163	17	incomplete-splice_match	CNOT3	ENST00000221232.10	2890	18	0	1195	0	58	3prime_fragment	FALSE	canonical	1	148882	junction_1	148577.95172356864	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	328	2535	20.0	0	True	NA	NA
PB.8954.2	chr4	-	4316	24	novel_in_catalog	SEC24D	novel	4030	23	NA	NA	8	-1	combination_of_known_junctions	TRUE	canonical	1	7859	junction_15	147435.03202529132	NA	3	NA	TRUE	NA	NA	NA	C	coding	588	1767	1859	3625	30.0	-9	True	AATAAA	-18
PB.1961.10	chr11	+	2537	8	incomplete-splice_match	STX3	ENST00000337979.8	3299	11	33812	3	1804	-3	5prime_fragment	FALSE	canonical	1	203334	junction_7	69088.98569738797	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	80	658	15.0	-4223	False	AATAAA	-22
PB.11243.8	chr8	+	2500	19	full-splice_match	DPY19L4	ENST00000414645.6	6197	19	-20	3717	5	284	multi-exon	FALSE	canonical	1	69946	junction_7	37462.42944773528	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	120	2291	30.0	-20	True	ATTAAA	-21
PB.11226.29	chr8	-	4234	16	full-splice_match	NBN	ENST00000265433.7	4666	16	31	401	-20	-253	multi-exon	FALSE	canonical	1	198817	junction_14	118152.53893110662	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	125	2389	10.0	-19	False	NA	NA
PB.1395.2	chr10	+	2263	21	incomplete-splice_match	WASHC2C	ENST00000540872.6	4327	29	-44	19452	-9	-12611	3prime_fragment	FALSE	canonical	1	872	junction_5	104925.82841078739	NA	4	1	TRUE	NA	NA	NA	C	coding	712	2136	128	2263	30.0	-75	False	NA	NA
PB.446.6	chr1	-	6964	49	novel_not_in_catalog	DOCK7	novel	3678	8	NA	NA	-48	-1	any annotated donor/acceptor	FALSE	canonical	1	2630	junction_7	56247.076803904885	NA	0	NA	TRUE	NA	NA	NA	C	coding	1851	5556	153	5708	25.0	127	False	ATTAAA	-18
PB.6782.12	chr2	-	1427	13	incomplete-splice_match	STAM2	ENST00000263904.4	5701	14	250	6987	-1	2216	3prime_fragment	FALSE	canonical	1	138483	junction_12	48418.49038045509	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1326	101	1426	30.0	19	True	NA	NA
PB.2263.8	chr11	-	4415	18	novel_not_in_catalog	NPAT	novel	6117	18	NA	NA	-2	286	any annotated donor/acceptor	FALSE	canonical	1	954	junction_16	49102.252739109266	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3984	432	4415	65.0	-1	True	AGTAAA	-28
PB.2263.9	chr11	-	4367	16	novel_in_catalog	NPAT	novel	6117	18	NA	NA	2	286	intron_retention	FALSE	canonical	1	101650	junction_15	17115.75951948639	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2919	105	3023	65.0	-3	True	AGTAAA	-28
PB.7388.4	chr20	-	2528	6	novel_not_in_catalog	PRELID3B	novel	2626	6	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	canonical	1	6985	junction_1	341529.3912439162	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	109	579	25.0	-53	True	AATAAA	-17
PB.2263.2	chr11	-	5935	18	full-splice_match	NPAT	ENST00000278612.8	6117	18	4	178	-2	-178	multi-exon	FALSE	canonical	1	101650	junction_17	19913.8532553107	NA	1	NA	TRUE	NA	NA	NA	C	coding	1427	4284	103	4386	40.0	-1	True	AATAAA	-18
PB.2263.3	chr11	-	5741	18	full-splice_match	NPAT	ENST00000278612.8	6117	18	6	370	0	-370	multi-exon	FALSE	canonical	1	101650	junction_17	19913.8532553107	NA	1	NA	TRUE	NA	NA	NA	C	coding	1427	4284	101	4384	40.0	1	True	AATAAA	-19
PB.2263.1	chr11	-	6019	18	novel_in_catalog	NPAT	novel	6117	18	NA	NA	-2	-115	combination_of_known_junctions	TRUE	canonical	1	9908	junction_2	35783.33894445627	NA	1	NA	TRUE	NA	NA	NA	C	coding	1434	4305	103	4407	10.0	-1	True	ATTAAA	-15
PB.2263.6	chr11	-	4558	18	novel_not_in_catalog	NPAT	novel	6117	18	NA	NA	7	286	any annotated donor/acceptor	FALSE	canonical	1	523	junction_17	48842.696953612445	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3984	575	4558	65.0	8	True	AGTAAA	-28
PB.2263.7	chr11	-	4202	17	incomplete-splice_match	NPAT	ENST00000278612.8	6117	18	4	3771	-2	198	3prime_fragment	FALSE	canonical	1	101650	junction_16	19244.447886013775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1366	4098	103	4200	55.0	-1	True	NA	NA
PB.2263.4	chr11	-	4735	18	full-splice_match	NPAT	ENST00000278612.8	6117	18	-23	1405	-23	18	multi-exon	FALSE	canonical	1	101650	junction_17	19913.8532553107	NA	1	NA	TRUE	NA	NA	NA	C	coding	1427	4284	130	4413	15.0	1309	False	AATAGA	-24
PB.2263.5	chr11	-	4727	17	incomplete-splice_match	NPAT	ENST00000278612.8	6117	18	25	3225	-1	744	3prime_fragment	FALSE	canonical	1	101650	junction_16	19244.447886013775	NA	1	NA	TRUE	NA	NA	NA	C	coding	1418	4257	82	4338	15.0	20	True	AATAAA	-14
PB.7675.12	chr22	-	1344	11	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	1	345	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	207055.5760851661	NA	2	1	TRUE	NA	NA	NA	B	coding	270	813	64	876	35.0	1	True	CATAAA	-17
PB.11270.6	chr8	-	3564	9	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	49	-8	no_combination_of_known_junctions	FALSE	canonical	1	4818	junction_8	155681.77569519618	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	490	2076	5.0	-1	True	AATAAA	-16
PB.11270.1	chr8	-	3997	9	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-53	3	intron_retention	FALSE	canonical	1	10844	junction_7	165680.48897803266	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	912	2498	20.0	-21	True	AATAAA	-27
PB.7675.11	chr22	-	2606	10	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	0	-218	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	272918.7602924276	NA	3	1	TRUE	NA	NA	NA	B	coding	271	816	66	881	20.0	-1	True	AATAAA	-30
PB.11270.3	chr8	-	4790	11	novel_not_in_catalog	RNF19A	novel	4330	11	NA	NA	-42	1	intron_retention	FALSE	canonical	1	1371	junction_10	174229.69183836033	NA	2	NA	TRUE	NA	NA	NA	C	coding	807	2424	870	3293	20.0	-10	True	AATAAA	-25
PB.11224.8	chr8	+	1910	11	full-splice_match	RIPK2	ENST00000220751.4	2584	11	40	634	-19	-179	multi-exon	FALSE	canonical	1	119198	junction_1	111035.4753600848	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	275	1897	45.0	-29	True	AATAAA	-23
PB.11224.9	chr8	+	2363	10	full-splice_match	RIPK2	ENST00000522965.1	1916	10	8	-455	-3	0	multi-exon	FALSE	canonical	1	125387	junction_1	101324.4338833323	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	505	1716	5.0	-2	True	AATAAA	-19
PB.5896.1	chr19	+	1664	2	full-splice_match	PLEKHF1	ENST00000436066.3	2084	2	400	20	-3	-20	multi-exon	FALSE	canonical	1	98695	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	67	906	55.0	-5	True	NA	NA
PB.11224.7	chr8	+	1745	10	full-splice_match	RIPK2	ENST00000522965.1	1916	10	-7	178	-7	-178	multi-exon	FALSE	canonical	1	125387	junction_1	101324.4338833323	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	520	1731	45.0	-17	True	AATAAA	-24
PB.11224.4	chr8	+	2279	10	full-splice_match	RIPK2	ENST00000522965.1	1916	10	-32	-331	27	-124	multi-exon	FALSE	canonical	1	125387	junction_1	101324.4338833323	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	545	1756	70.0	-1723	False	TTTAAA	-43
PB.5896.2	chr19	+	1993	2	full-splice_match	PLEKHF1	ENST00000592810.1	1357	2	-10	-626	-10	12	multi-exon	FALSE	canonical	1	18516	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	109	1203	45.0	-12	True	NA	NA
PB.11224.2	chr8	+	2445	11	full-splice_match	RIPK2	ENST00000220751.4	2584	11	15	124	15	-124	multi-exon	FALSE	canonical	1	119198	junction_1	111035.4753600848	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	300	1922	70.0	1	True	TTTAAA	-43
PB.11224.3	chr8	+	3944	1	novel_in_catalog	RIPK2	novel	2584	11	NA	NA	22	-1146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	8	True	NA	NA
PB.11224.1	chr8	+	2460	11	full-splice_match	RIPK2	ENST00000220751.4	2584	11	45	79	-14	-79	multi-exon	FALSE	canonical	1	119198	junction_1	111035.4753600848	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	270	1892	15.0	-24	True	AATAAA	-16
PB.97.1	chr1	+	5416	22	novel_in_catalog	CLCN6	novel	5631	22	NA	NA	-11	-10	intron_retention	FALSE	canonical	1	39868	junction_11	34759.61114488065	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	1208	2506	5.0	9	True	AATAAA	-18
PB.1268.1	chr10	-	2921	1	antisense	novelGene_WDR37_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	3562	False	NA	NA
PB.97.3	chr1	+	1902	6	full-splice_match	CLCN6	ENST00000376497.7	814	6	31	-1119	13	1119	multi-exon	FALSE	canonical	1	10614	junction_5	49575.957105839116	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	20	388	35.0	3	True	NA	NA
PB.97.2	chr1	+	5569	23	full-splice_match	CLCN6	ENST00000346436.10	5583	23	11	3	9	-2	multi-exon	FALSE	canonical	1	82689	junction_11	30656.112293782593	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2610	42	2651	10.0	-19	True	AATAAA	-26
PB.97.5	chr1	+	5036	17	novel_in_catalog	CLCN6	novel	5631	22	NA	NA	-6092	-1	intron_retention	FALSE	canonical	1	5646	junction_3	46240.663549352044	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	525	2117	10.0	NA	False	AATAAA	-27
PB.97.4	chr1	+	5499	23	novel_not_in_catalog	CLCN6	novel	5631	22	NA	NA	14	-15	intron_retention	FALSE	canonical	1	25850	junction_19	37548.0819693973	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	19	2202	5.0	4	True	AATAAA	-13
PB.11551.7	chr9	+	2691	3	full-splice_match	ALDH1B1	ENST00000635162.1	584	3	33	-2140	33	-383	multi-exon	FALSE	canonical	1	6068	junction_2	1514.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	162	1715	45.0	-20	True	NA	NA
PB.11551.6	chr9	+	2325	2	full-splice_match	ALDH1B1	ENST00000377698.3	3066	2	57	684	9	-684	multi-exon	FALSE	canonical	1	350081	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	97	1650	55.0	-44	True	NA	NA
PB.11536.7	chr9	-	3080	12	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	75522.40008344303	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	157	2148	20.0	2	True	AATAAA	-16
PB.8389.1	chr3	+	3033	23	novel_in_catalog	COPG1	novel	3078	24	NA	NA	-6	2	no_combination_of_known_junctions	TRUE	canonical	1	11522	junction_1	370992.761909022	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	136	2682	20.0	-6	True	AATAAA	-22
PB.8946.11	chr4	+	2144	12	novel_in_catalog	LARP7	novel	2286	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	370357	junction_2	116214.10686663611	NA	17	1	TRUE	NA	NA	NA	C	coding	355	1068	819	1886	25.0	5	True	AATAAA	-16
PB.2213.5	chr11	-	6153	4	full-splice_match	CTSC	ENST00000524463.5	6125	4	-25	-3	1	3	multi-exon	FALSE	canonical	1	856131	junction_1	228596.47899640878	NA	4	NA	TRUE	NA	NA	NA	C	coding	137	414	115	528	15.0	362	False	AATATA	-4
PB.11156.8	chr8	+	4860	5	novel_not_in_catalog	YTHDF3	novel	5193	6	NA	NA	24	158	any annotated donor/acceptor	FALSE	canonical	1	31217	junction_1	163402.74807569027	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	359	1963	40.0	-759	False	ATTAAA	-14
PB.7388.8	chr20	-	2544	6	full-splice_match	PRELID3B	ENST00000463057.1	704	6	-82	-1758	-5	-6	multi-exon	FALSE	canonical	1	32059	junction_4	322783.1090025623	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	374	688	20.0	-29	True	AATAAA	-12
PB.3215.2	chr13	-	3195	2	full-splice_match	SLITRK6	ENST00000647374.1	4219	2	-49	1073	-2	14	multi-exon	FALSE	canonical	1	38262	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	547	3072	85.0	-17	False	AGTAAA	-9
PB.3215.1	chr13	-	3547	2	full-splice_match	SLITRK6	ENST00000647374.1	4219	2	-20	692	-20	395	multi-exon	TRUE	canonical	1	38262	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	841	2526	518	3043	50.0	12	True	AATAAA	-16
PB.103.2	chr1	+	2268	10	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	-3490	-1325	any annotated donor/acceptor	FALSE	canonical	1	410	junction_1	174539.3098868498	NA	46	3	TRUE	NA	NA	NA	C	coding	442	1329	57	1385	65.0	-8809	False	NA	NA
PB.9323.2	chr5	-	3274	6	full-splice_match	DHFR	ENST00000439211.6	3917	6	423	220	-2	-220	multi-exon	FALSE	canonical	1	111	junction_2	1342.9971556187304	NA	3	NA	TRUE	NA	NA	NA	C	coding	173	522	114	635	80.0	0	True	NA	NA
PB.9323.3	chr5	-	2805	6	full-splice_match	DHFR	ENST00000439211.6	3917	6	459	653	23	-653	multi-exon	FALSE	canonical	1	111	junction_2	1342.9971556187304	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	78	599	90.0	458	False	GATAAA	-3
PB.9323.1	chr5	-	3487	6	full-splice_match	DHFR	ENST00000439211.6	3917	6	425	5	0	-5	multi-exon	FALSE	canonical	1	111	junction_2	1342.9971556187304	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	112	633	20.0	424	False	AATAAA	-15
PB.9323.4	chr5	-	2261	7	novel_not_in_catalog	DHFR	novel	3917	6	NA	NA	0	-653	intron_retention	FALSE	non_canonical	0	0	junction_1	1266.9210270924107	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	101	622	90.0	435	False	GATAAA	-3
PB.9323.5	chr5	-	2073	6	full-splice_match	DHFR	ENST00000439211.6	3917	6	423	1421	-2	368	multi-exon	FALSE	canonical	1	111	junction_2	1342.9971556187304	NA	22	NA	TRUE	NA	NA	NA	C	coding	173	522	114	635	70.0	0	True	AATGAA	-13
PB.6779.2	chr2	-	2187	4	incomplete-splice_match	NMI	ENST00000243346.9	1623	8	179	6808	-15	-18	3prime_fragment	FALSE	canonical	1	154471	junction_3	120916.11226613083	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	293	685	80.0	35	True	NA	NA
PB.6779.1	chr2	-	1229	8	full-splice_match	NMI	ENST00000243346.9	1623	8	390	4	196	-4	multi-exon	TRUE	canonical	1	154471	junction_7	124691.81125871734	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	82	1005	20.0	0	True	AATAAA	-16
PB.5701.18	chr19	-	3991	24	novel_in_catalog	TYK2	novel	3971	23	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	2484	junction_17	156970.317173262	NA	0	NA	TRUE	NA	NA	NA	C	coding	1114	3345	347	3691	10.0	-13	True	AATAAA	-15
PB.5701.19	chr19	-	4692	25	novel_in_catalog	TYK2	novel	3971	23	NA	NA	3	-2	intron_retention	FALSE	canonical	1	2329	junction_22	178909.66917202395	NA	36	NA	TRUE	NA	NA	NA	C	coding	885	2658	732	3389	10.0	-1	True	AATAAA	-14
PB.11591.6	chr9	+	4543	1	full-splice_match	FAM122A	ENST00000394264.5	4575	1	29	3	29	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	287	864	103	966	40.0	-2	True	AATAAA	-31
PB.103.3	chr1	+	3633	9	full-splice_match	TNFRSF1B	ENST00000492361.1	3583	9	-59	9	-59	-9	multi-exon	FALSE	canonical	1	9129	junction_1	150136.54106590565	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	634	1434	15.0	-7128	False	AATAAA	-13
PB.11379.3	chr8	-	3069	4	novel_in_catalog	PYCR3	novel	2678	6	NA	NA	-7	145	intron_retention	FALSE	canonical	1	101862	junction_3	37516.26870513052	NA	7	NA	TRUE	NA	NA	NA	C	coding	124	375	34	408	55.0	-7	True	NA	NA
PB.11379.2	chr8	-	2528	6	full-splice_match	PYCR3	ENST00000220966.10	2678	6	8	142	8	-142	multi-exon	FALSE	canonical	1	101862	junction_5	34987.76904576798	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	59	883	5.0	8441	False	NA	NA
PB.5701.10	chr19	-	4182	25	novel_in_catalog	TYK2	novel	3971	23	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	1	16976	junction_24	155679.0724885297	NA	0	NA	TRUE	NA	NA	NA	C	coding	1180	3543	338	3880	15.0	-33	False	AATAAA	-17
PB.5701.11	chr19	-	4714	25	novel_in_catalog	TYK2	novel	3971	23	NA	NA	-11	0	intron_retention	FALSE	canonical	1	8485	junction_10	178589.25856650318	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	364	2412	10.0	-30	True	AATAAA	-16
PB.5701.12	chr19	-	4168	25	novel_not_in_catalog	TYK2	novel	3971	23	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	1141	junction_5	154865.94251291963	NA	2	NA	TRUE	NA	NA	NA	C	coding	1060	3183	351	3533	10.0	-17	True	AATAAA	-16
PB.5701.13	chr19	-	3983	24	novel_in_catalog	TYK2	novel	3971	23	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4779	junction_22	157187.3676648915	NA	4	1	TRUE	NA	NA	NA	C	coding	1088	3267	416	3682	10.0	-19	True	AATAAA	-16
PB.8389.3	chr3	+	2906	24	full-splice_match	COPG1	ENST00000314797.10	3078	24	19	153	-2	122	multi-exon	FALSE	canonical	1	775161	junction_1	274874.31229984696	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	86	2710	35.0	19	True	NA	NA
PB.5701.15	chr19	-	2790	18	novel_not_in_catalog	TYK2	novel	3971	23	NA	NA	892	0	any annotated donor/acceptor	FALSE	canonical	1	672	junction_3	175860.7267626119	NA	2	1	TRUE	NA	NA	NA	C	coding	623	1872	245	2116	10.0	-84	False	AATAAA	-16
PB.5701.17	chr19	-	5087	23	novel_in_catalog	TYK2	novel	3971	23	NA	NA	-20	0	intron_retention	FALSE	canonical	1	302466	junction_16	125212.30658355914	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	420	3353	10.0	-25	False	AATAAA	-16
PB.8641.1	chr4	+	2217	4	full-splice_match	ZNF595	ENST00000610261.5	2911	4	4	690	3	0	multi-exon	FALSE	canonical	1	47958	junction_3	57140.45891193618	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	201	2147	30.0	-6162	False	AATAAA	-21
PB.12037.9	chrX	+	5460	29	novel_in_catalog	KDM6A	novel	5924	30	NA	NA	11	-351	combination_of_known_junctions	FALSE	canonical	1	29009	junction_13	55626.809639297884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1395	4188	437	4624	25.0	0	True	ATTAAA	-15
PB.12037.8	chrX	+	5271	28	novel_in_catalog	KDM6A	novel	5924	30	NA	NA	11	-384	combination_of_known_junctions	FALSE	canonical	1	68832	junction_13	51608.68896289786	NA	0	NA	TRUE	NA	NA	NA	C	coding	1343	4032	437	4468	50.0	0	True	AATAAA	-15
PB.12037.5	chrX	+	5153	28	novel_in_catalog	KDM6A	novel	5924	30	NA	NA	0	423	combination_of_known_junctions	FALSE	canonical	1	68832	junction_13	51608.68896289786	NA	1	NA	TRUE	NA	NA	NA	C	coding	1343	4032	448	4479	45.0	-11	True	TATAAA	-18
PB.12037.4	chrX	+	5152	29	full-splice_match	KDM6A	ENST00000377967.8	5438	29	-347	633	-13	307	multi-exon	FALSE	canonical	1	68832	junction_13	49571.2030772326	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	461	4594	45.0	1	True	AATAAA	-19
PB.12037.7	chrX	+	5334	28	novel_in_catalog	KDM6A	novel	5924	30	NA	NA	1	-352	combination_of_known_junctions	FALSE	canonical	1	47322	junction_12	53823.82673330405	NA	0	NA	TRUE	NA	NA	NA	C	coding	1350	4053	447	4499	25.0	-10	True	ATTAAA	-14
PB.12037.6	chrX	+	5391	29	novel_not_in_catalog	KDM6A	novel	5924	30	NA	NA	1	-352	any annotated donor/acceptor	FALSE	canonical	1	1996	junction_5	66171.41891812322	NA	5	NA	TRUE	NA	NA	NA	C	coding	1369	4110	447	4556	25.0	-10	True	ATTAAA	-14
PB.12037.1	chrX	+	4991	29	full-splice_match	KDM6A	ENST00000377967.8	5438	29	91	356	50	-352	multi-exon	FALSE	canonical	1	68832	junction_13	49571.2030772326	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	23	4156	25.0	2	True	ATTAAA	-14
PB.12037.3	chrX	+	5586	30	full-splice_match	KDM6A	ENST00000611820.4	5924	30	-13	351	-13	-351	multi-exon	FALSE	canonical	1	29009	junction_13	53662.418583321916	NA	1	NA	TRUE	NA	NA	NA	C	coding	1429	4290	461	4750	25.0	1	True	ATTAAA	-15
PB.12037.2	chrX	+	5451	29	full-splice_match	KDM6A	ENST00000382899.8	5789	29	-13	351	-13	-351	multi-exon	FALSE	canonical	1	47322	junction_12	51789.31815709969	NA	2	NA	TRUE	NA	NA	NA	C	coding	1384	4155	461	4615	25.0	1	True	ATTAAA	-15
PB.103.4	chr1	+	3700	10	full-splice_match	TNFRSF1B	ENST00000376259.6	3683	10	-18	1	-18	-1	multi-exon	FALSE	canonical	1	190458	junction_1	102960.58930388108	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	108	1493	5.0	-6	True	AATAAA	-21
PB.1964.48	chr11	+	3367	5	novel_in_catalog	MS4A1	novel	495	3	NA	NA	9	139	intron_retention	FALSE	canonical	1	599322	junction_1	295762.8310948656	NA	3	NA	TRUE	NA	NA	NA	C	coding	124	375	2991	3365	5.0	21	True	AATAGA	-22
PB.1964.44	chr11	+	1759	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	275	combination_of_known_junctions	FALSE	canonical	1	15613	junction_2	490707.4622917156	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	158	1060	70.0	4	True	NA	NA
PB.1964.45	chr11	+	4343	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	3	277	intron_retention	FALSE	canonical	1	263820	junction_2	442265.15617280995	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	3268	3642	70.0	7	True	NA	NA
PB.1964.46	chr11	+	1875	7	full-splice_match	MS4A1	ENST00000534668.5	3475	7	7	1593	3	275	multi-exon	FALSE	canonical	1	28600	junction_1	422645.04799049627	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	283	1176	70.0	7	True	NA	NA
PB.1964.47	chr11	+	2887	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	48	396	-2	298	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	106	999	65.0	10	True	AATGAA	-7
PB.1964.40	chr11	+	1969	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	277	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	375	1268	70.0	4	True	NA	NA
PB.1964.41	chr11	+	1928	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	275	intron_retention	FALSE	canonical	1	26330	junction_6	457158.2653807751	NA	20	2	TRUE	NA	NA	NA	C	coding	284	855	375	1229	70.0	4	True	NA	NA
PB.1964.42	chr11	+	1850	9	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	277	combination_of_known_junctions	FALSE	canonical	1	15613	junction_3	446418.2948309067	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	247	1149	70.0	4	True	NA	NA
PB.1964.43	chr11	+	1706	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	42	1583	0	277	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	112	1005	70.0	4	True	NA	NA
PB.6519.11	chr2	+	2923	10	novel_not_in_catalog	PLEK	novel	2869	9	NA	NA	112	-2	any annotated donor/acceptor	FALSE	canonical	1	557	junction_5	430525.04897395306	NA	24	2	TRUE	NA	NA	NA	C	coding	172	519	770	1288	15.0	3	True	AATAAA	-20
PB.11591.8	chr9	+	1691	1	full-splice_match	FAM122A	ENST00000394264.5	4575	1	33	2851	33	-2851	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	287	864	99	962	30.0	2	True	AATAAA	-21
PB.10611.1	chr7	+	2575	5	novel_not_in_catalog	PMS2P5	novel	516	4	NA	NA	-3371	9899	intron_retention	FALSE	canonical	1	622	junction_3	23038.219082646123	NA	4	2	TRUE	NA	NA	NA	B	coding	32	99	266	364	75.0	NA	False	NA	NA
PB.10611.3	chr7	+	2748	6	novel_not_in_catalog	PMS2P5	novel	516	4	NA	NA	-3360	9899	intron_retention	FALSE	canonical	1	148	junction_3	20851.58379212476	NA	2	NA	TRUE	NA	NA	NA	B	coding	62	189	255	443	75.0	NA	False	NA	NA
PB.10611.2	chr7	+	3028	7	novel_not_in_catalog	PMS2P5	novel	516	4	NA	NA	-3364	9899	intron_retention	FALSE	canonical	1	2395	junction_3	19146.398812106214	NA	1	NA	TRUE	NA	NA	NA	B	coding	31	96	422	517	75.0	NA	False	NA	NA
PB.8389.5	chr3	+	3292	23	novel_in_catalog	COPG1	novel	3078	24	NA	NA	2	0	intron_retention	FALSE	canonical	1	775161	junction_1	279568.7909327713	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	1266	2945	25.0	2	True	AATAAA	-18
PB.10964.2	chr8	+	1909	3	full-splice_match	CLN8	ENST00000331222.5	7169	3	56	5204	0	9	multi-exon	FALSE	canonical	1	96838	junction_2	55.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	250	1110	100.0	2	True	NA	NA
PB.10021.2	chr6	-	2547	4	full-splice_match	ENPP5	ENST00000230565.3	2544	4	-5	2	-5	-2	multi-exon	FALSE	canonical	1	28571	junction_3	55396.25829121193	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	205	1638	65.0	-20	True	ATTAAA	-18
PB.9912.10	chr6	-	3542	5	novel_not_in_catalog	HLA-DOA	novel	3489	5	NA	NA	5	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	59499.356124667436	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	756	1211	40.0	1	True	ATTAAA	-14
PB.9912.11	chr6	-	2054	5	full-splice_match	HLA-DOA	ENST00000229829.6	3489	5	18	1417	-12	1012	multi-exon	FALSE	canonical	1	88034	junction_4	26600.060253691157	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	59	811	80.0	-19	True	NA	NA
PB.10964.1	chr8	+	2035	4	novel_not_in_catalog	CLN8	novel	835	2	NA	NA	0	16	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	45675.820308877745	NA	1	1	TRUE	NA	NA	NA	C	coding	286	861	250	1110	20.0	2	True	AATAAA	-22
PB.11536.8	chr9	-	3038	13	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62445.841619569735	NA	1	NA	TRUE	NA	NA	NA	C	coding	722	2169	175	2343	20.0	-5	True	AATAAA	-16
PB.10160.2	chr6	+	3000	11	novel_not_in_catalog	RPF2	novel	873	9	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	123482.7809575489	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	70	990	25.0	0	True	AATAAA	-16
PB.10160.3	chr6	+	3671	10	full-splice_match	RPF2	ENST00000441448.6	1531	10	24	-2164	-11	1	multi-exon	FALSE	canonical	1	91229	junction_4	111207.77418568062	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	69	989	20.0	1	True	AATAAA	-18
PB.10160.1	chr6	+	3399	10	full-splice_match	RPF2	ENST00000441448.6	1531	10	5	-1873	5	-290	multi-exon	FALSE	canonical	1	91229	junction_4	111207.77418568062	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	88	1008	30.0	-1	True	CATAAA	-22
PB.10160.6	chr6	+	1497	10	full-splice_match	RPF2	ENST00000441448.6	1531	10	33	1	-2	-1	multi-exon	FALSE	canonical	1	91229	junction_4	111207.77418568062	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	60	980	20.0	10	True	AATATA	-17
PB.10160.7	chr6	+	3611	9	full-splice_match	RPF2	ENST00000607388.1	3621	9	9	1	9	-1	multi-exon	FALSE	canonical	1	10277	junction_2	134360.0968553699	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	200	931	25.0	21	True	AATAAA	-16
PB.10160.4	chr6	+	3534	10	full-splice_match	RPF2	ENST00000441448.6	1531	10	24	-2027	-11	-136	multi-exon	FALSE	canonical	1	91229	junction_4	111207.77418568062	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	69	989	10.0	1	True	NA	NA
PB.10160.5	chr6	+	3790	11	novel_not_in_catalog	RPF2	novel	873	9	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	7978	junction_4	130072.51575444368	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	511	1110	25.0	2	True	AATAAA	-16
PB.6884.3	chr2	+	3984	24	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-27	663	combination_of_known_junctions	FALSE	canonical	1	17251	junction_2	213975.5552711995	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	302	2608	45.0	-15	True	ATTAAA	-18
PB.8068.13	chr3	+	3549	20	full-splice_match	SACM1L	ENST00000389061.9	3723	20	157	17	-40	0	multi-exon	FALSE	canonical	1	249581	junction_4	76960.54547868493	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	48	1811	25.0	-16	False	AATAAA	-17
PB.8278.1	chr3	+	2010	3	novel_in_catalog	LINC02085	novel	2051	4	NA	NA	-67	-7	no_combination_of_known_junctions	FALSE	canonical	1	1850	junction_1	824.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	8	True	NA	NA
PB.8046.2	chr3	-	2690	4	full-splice_match	HIGD1A	ENST00000321331.11	1373	4	22	-1339	-19	1339	multi-exon	FALSE	canonical	1	451491	junction_1	82140.31763999943	NA	0	NA	TRUE	NA	NA	NA	C	coding	93	282	97	378	25.0	-22	True	NA	NA
PB.6179.1	chr19	-	3857	6	novel_not_in_catalog	AC011468.2	novel	535	5	NA	NA	-123	-23301	any annotated donor/acceptor	FALSE	canonical	1	14	junction_1	23200.015393098343	NA	2	1	TRUE	NA	NA	NA	A	coding	936	2811	536	3346	20.0	5	True	NA	NA
PB.10993.1	chr8	-	4064	5	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	0	1343	intron_retention	FALSE	canonical	1	6014	junction_1	102485.68467931265	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	279	782	15.0	-1	True	AATAAA	-28
PB.9766.1	chr6	-	2202	1	full-splice_match	NHLRC1	ENST00000340650.5	2248	1	4	42	4	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	395	1188	78	1265	25.0	-40	True	ATTAAA	-19
PB.10993.2	chr8	-	4204	6	full-splice_match	CNOT7	ENST00000523917.5	1885	6	21	-2340	0	1338	multi-exon	TRUE	canonical	1	28667	junction_5	197293.3401629158	NA	3	NA	TRUE	NA	NA	NA	C	coding	244	735	279	1013	25.0	-1	True	AATAAA	-23
PB.8068.14	chr3	+	3612	21	novel_in_catalog	SACM1L	novel	571	6	NA	NA	-13	1	no_combination_of_known_junctions	FALSE	canonical	1	106	junction_1	127597.6124309934	NA	2	NA	TRUE	NA	NA	NA	C	coding	484	1455	418	1872	25.0	11	True	AATAAA	-19
PB.8673.7	chr4	+	1618	13	novel_not_in_catalog	RGS12	novel	1530	8	NA	NA	5	72	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	54330.74887430741	NA	6	1	TRUE	NA	NA	NA	B	coding	373	1119	498	1616	75.0	13	True	NA	NA
PB.8673.6	chr4	+	2953	6	incomplete-splice_match	RGS12	ENST00000508158.5	2121	13	551	9586	-2	-498	internal_fragment	FALSE	canonical	1	33397	junction_1	41579.676028559916	NA	0	NA	TRUE	NA	NA	NA	B	coding	311	936	696	1631	85.0	6	True	NA	NA
PB.8673.5	chr4	+	3446	14	novel_not_in_catalog	RGS12	novel	1530	8	NA	NA	6	-74	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	53635.23510577791	NA	6	1	TRUE	NA	NA	NA	B	coding	575	1728	515	2242	20.0	-4	True	AATAAA	-20
PB.8673.4	chr4	+	2059	13	incomplete-splice_match	RGS12	ENST00000338806.4	3010	16	15927	11312	107	-5	internal_fragment	FALSE	canonical	1	33397	junction_1	47799.95633685825	NA	0	NA	TRUE	NA	NA	NA	B	coding	491	1473	587	2059	65.0	-4698	False	NA	NA
PB.8673.3	chr4	+	3927	13	novel_in_catalog	RGS12	novel	1530	8	NA	NA	-17	-82	intron_retention	FALSE	canonical	1	33397	junction_1	53149.42429734201	NA	1	1	TRUE	NA	NA	NA	B	coding	499	1500	729	2228	30.0	7	True	AATAAA	-12
PB.8673.2	chr4	+	3515	4	novel_in_catalog	RGS12	novel	1530	8	NA	NA	3	925	no_combination_of_known_junctions	FALSE	canonical	1	9725	junction_3	26169.02643711964	NA	12	1	TRUE	NA	NA	NA	B	coding	679	2040	171	2210	10.0	-6	True	NA	NA
PB.8673.1	chr4	+	5515	16	novel_not_in_catalog	RGS12	novel	1530	8	NA	NA	-10	-79	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	56727.945194429725	NA	7	1	TRUE	NA	NA	NA	B	coding	575	1728	2589	4316	25.0	-19	True	AATAAA	-15
PB.5919.3	chr19	+	2639	5	full-splice_match	ZNF30	ENST00000439785.5	2651	5	7	5	0	1	multi-exon	FALSE	canonical	1	2799	junction_1	8539.214981483954	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	438	2312	40.0	4	True	AATAAA	-17
PB.5919.2	chr19	+	2718	6	novel_in_catalog	ZNF30	novel	2579	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2799	junction_1	8854.932984500785	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	764	2392	35.0	4	True	AATAAA	-16
PB.5919.1	chr19	+	2682	6	full-splice_match	ZNF30	ENST00000601957.5	2583	6	-101	2	-24	2	multi-exon	FALSE	canonical	1	20903	junction_1	2548.3301669917105	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	726	2354	40.0	-165	False	AATAAA	-18
PB.3427.1	chr14	-	2632	5	full-splice_match	SAV1	ENST00000324679.4	3063	5	424	7	390	-7	multi-exon	FALSE	canonical	1	78889	junction_4	104953.3415249367	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	40	1092	25.0	988	False	ATTAAA	-13
PB.8673.9	chr4	+	3288	13	novel_not_in_catalog	RGS12	novel	1530	8	NA	NA	13	-76	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	58768.406933664904	NA	18	1	TRUE	NA	NA	NA	B	coding	356	1071	513	1583	20.0	21	True	AATAAA	-18
PB.5919.4	chr19	+	2550	5	full-splice_match	ZNF30	ENST00000601142.1	2280	5	-109	-161	25	0	multi-exon	FALSE	canonical	1	11686	junction_4	5325.640166918903	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	347	2218	40.0	-109	False	AATAAA	-22
PB.4632.2	chr16	+	3014	10	novel_in_catalog	AFG3L1P	novel	569	4	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	9428	junction_5	42724.70450323664	NA	0	NA	TRUE	NA	NA	NA	B	coding	122	369	712	1080	35.0	5	True	NA	NA
PB.4632.3	chr16	+	2919	10	novel_in_catalog	AFG3L1P	novel	569	4	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4674	junction_1	43319.30416492552	NA	0	NA	TRUE	NA	NA	NA	B	coding	122	369	617	985	35.0	5	True	NA	NA
PB.4632.1	chr16	+	3082	11	novel_in_catalog	AFG3L1P	novel	569	4	NA	NA	-20	-3	combination_of_known_junctions	FALSE	canonical	1	17894	junction_6	33439.94349636375	NA	0	NA	TRUE	NA	NA	NA	B	coding	122	369	783	1151	30.0	-15	False	NA	NA
PB.4632.4	chr16	+	3123	11	novel_in_catalog	AFG3L1P	novel	569	4	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	9428	junction_6	38506.62256755323	NA	2	1	TRUE	NA	NA	NA	B	coding	104	315	1046	1360	55.0	15	True	NA	NA
PB.6092.1	chr19	+	1834	14	full-splice_match	CCDC61	ENST00000595358.5	1817	14	-18	1	-12	0	multi-exon	FALSE	canonical	1	38514	junction_1	52243.13391097664	NA	0	NA	TRUE	NA	NA	NA	A	coding	512	1539	68	1606	30.0	-18	True	AATAAA	-17
PB.1757.5	chr11	+	3255	22	full-splice_match	AP2A2	ENST00000448903.6	4575	22	11	1309	-8	4	multi-exon	FALSE	canonical	1	191469	junction_14	156530.1044687933	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	131	2950	15.0	22	True	ATTAAA	-22
PB.10993.7	chr8	-	1488	8	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	-2	17	combination_of_known_junctions	FALSE	canonical	1	6579	junction_6	209721.3306229123	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	705	1319	90.0	-3	True	NA	NA
PB.1757.3	chr11	+	3366	21	novel_in_catalog	AP2A2	novel	549	5	NA	NA	-3	1	intron_retention	FALSE	canonical	1	146896	junction_7	177245.49378290976	NA	2	1	TRUE	NA	NA	NA	C	coding	606	1821	156	1976	10.0	-3	True	ATTAAA	-19
PB.1757.2	chr11	+	4602	22	full-splice_match	AP2A2	ENST00000448903.6	4575	22	-28	1	-17	-1	multi-exon	FALSE	canonical	1	191469	junction_14	156530.1044687933	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	170	2989	15.0	-17	True	AATAAA	-12
PB.1757.1	chr11	+	3116	21	novel_in_catalog	AP2A2	novel	549	5	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	1	19888	junction_14	172933.1319017267	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	172	2139	25.0	-19	True	ATTAAA	-9
PB.9832.12	chr6	+	2949	2	incomplete-splice_match	HLA-F	ENST00000465459.2	623	5	-1624	12010	3	-7	intron_retention	FALSE	canonical	1	1590592	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	114	345	1220	1564	40.0	-4	True	AATAAA	-20
PB.10035.8	chr6	-	2080	13	incomplete-splice_match	ICK	ENST00000350082.9	6116	14	-53	5100	-21	-5068	3prime_fragment	FALSE	canonical	1	42499	junction_12	27553.419295146774	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	401	2080	45.0	0	True	NA	NA
PB.8389.6	chr3	+	4350	22	novel_in_catalog	COPG1	novel	3078	24	NA	NA	-4	0	intron_retention	FALSE	canonical	1	775161	junction_1	261468.30859035676	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	88	1635	25.0	17	True	AATAAA	-18
PB.9832.11	chr6	+	3144	3	incomplete-splice_match	HLA-F	ENST00000484704.5	1201	4	-727	-769	3	-1	intron_retention	FALSE	canonical	1	1590592	junction_2	10653.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	779	1426	25.0	-4	True	NA	NA
PB.10035.1	chr6	-	6177	14	novel_not_in_catalog	ICK	novel	6116	14	NA	NA	-29	11	any annotated donor/acceptor	FALSE	canonical	1	3515	junction_5	37769.358763530574	NA	1	NA	TRUE	NA	NA	NA	C	coding	639	1920	409	2328	10.0	-8	True	AATAAA	-22
PB.10035.2	chr6	-	6251	15	novel_not_in_catalog	ICK	novel	6116	14	NA	NA	-10	1	any annotated donor/acceptor	FALSE	canonical	1	5231	junction_14	40206.44659549927	NA	7	NA	TRUE	NA	NA	NA	C	coding	632	1899	514	2412	40.0	11	True	AATAAA	-12
PB.10035.4	chr6	-	6114	14	full-splice_match	ICK	ENST00000350082.9	6116	14	-30	32	2	0	multi-exon	FALSE	canonical	1	42499	junction_13	27969.104570249267	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	378	2276	45.0	23	True	AATAAA	-11
PB.10035.7	chr6	-	3086	14	full-splice_match	ICK	ENST00000350082.9	6116	14	-30	3060	2	-3028	multi-exon	FALSE	canonical	1	42499	junction_13	27969.104570249267	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	378	2276	45.0	23	True	AATAAA	-16
PB.3037.8	chr13	-	2111	10	novel_not_in_catalog	PSPC1	novel	1647	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2255	junction_1	361159.55283783464	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	188	1807	35.0	0	True	AATAAA	-21
PB.4615.2	chr16	-	2394	6	novel_not_in_catalog	ANKRD11	novel	9312	13	NA	NA	-432	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	10833.333049435894	NA	1	NA	TRUE	NA	NA	NA	B	coding	498	1497	47	1543	10.0	4543	False	NA	NA
PB.4615.1	chr16	-	3234	5	incomplete-splice_match	ANKRD11	ENST00000378330.7	9131	14	209381	4	-1223	-4	5prime_fragment	FALSE	canonical	1	104	junction_1	9931.481746824085	NA	0	NA	TRUE	NA	NA	NA	B	coding	498	1497	894	2390	30.0	3752	False	NA	NA
PB.11160.3	chr8	-	2473	7	full-splice_match	ARMC1	ENST00000276569.7	3032	7	174	385	129	-382	multi-exon	FALSE	canonical	1	110412	junction_4	101445.24742728627	NA	2	1	TRUE	NA	NA	NA	C	coding	275	828	93	920	95.0	177	False	NA	NA
PB.3037.1	chr13	-	1726	8	full-splice_match	PSPC1	ENST00000471658.5	1647	8	-66	-13	19	9	multi-exon	FALSE	canonical	1	119890	junction_1	297585.49049299967	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	227	1408	15.0	-8	False	ATTAAA	-27
PB.3037.2	chr13	-	2345	8	full-splice_match	PSPC1	ENST00000492741.5	1709	8	-2	-634	-2	2	multi-exon	FALSE	canonical	1	112701	junction_1	299215.4835469664	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	188	1369	15.0	0	True	ATTAAA	-16
PB.3037.3	chr13	-	1723	8	full-splice_match	PSPC1	ENST00000492741.5	1709	8	-16	2	-16	-2	multi-exon	FALSE	canonical	1	112701	junction_1	299215.4835469664	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	202	1383	5.0	-14	True	ATTAAA	-15
PB.3037.6	chr13	-	2018	10	full-splice_match	PSPC1	ENST00000619300.4	2013	10	-4	-1	-4	1	multi-exon	FALSE	canonical	1	2255	junction_1	320877.5814983375	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	142	1713	30.0	-48	False	AATAAA	-22
PB.3037.7	chr13	-	2186	10	novel_not_in_catalog	PSPC1	novel	1647	8	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	329899.51850866183	NA	3	1	TRUE	NA	NA	NA	C	coding	564	1695	188	1882	35.0	0	True	AATAAA	-21
PB.12025.4	chrX	-	2557	17	novel_in_catalog	RPGR	novel	3108	19	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	1	29723	junction_4	28797.20224251123	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	164	2278	40.0	4	True	AATAAA	-27
PB.12025.6	chrX	-	2715	19	full-splice_match	RPGR	ENST00000642395.1	3046	19	-30	361	-4	-4	multi-exon	FALSE	canonical	1	48957	junction_18	24796.59828148477	NA	1	NA	TRUE	NA	NA	NA	C	coding	815	2448	173	2620	60.0	-5	True	AGTAAA	-20
PB.12025.7	chrX	-	2262	16	incomplete-splice_match	RPGR	ENST00000318842.11	3108	19	21	7429	1	-3162	3prime_fragment	FALSE	canonical	1	48957	junction_15	17164.15769445154	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2085	177	2261	45.0	-9	True	NA	NA
PB.526.3	chr1	-	2560	12	novel_not_in_catalog	GBP5	novel	4112	4	NA	NA	-79	118	any annotated donor/acceptor	FALSE	canonical	1	73647	junction_11	189355.65575453878	NA	0	NA	TRUE	NA	NA	NA	B	coding	586	1761	560	2320	20.0	3	True	TATAAA	-19
PB.12025.1	chrX	-	3071	19	full-splice_match	RPGR	ENST00000642395.1	3046	19	-21	-4	-2	-3	multi-exon	FALSE	canonical	1	48957	junction_18	24796.59828148477	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	164	2611	45.0	4	True	AATAAA	-24
PB.12025.2	chrX	-	2738	17	novel_in_catalog	RPGR	novel	3108	19	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	29723	junction_4	28797.20224251123	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	165	2279	45.0	3	True	AATAAA	-23
PB.12025.3	chrX	-	2903	19	full-splice_match	RPGR	ENST00000318842.11	3108	19	22	183	2	3	multi-exon	FALSE	canonical	1	48957	junction_18	24796.59828148477	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	176	2623	40.0	-8	True	AATAAA	-28
PB.401.22	chr1	-	4348	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-11	-975	any annotated donor/acceptor	FALSE	canonical	1	4002	junction_16	163624.6966531385	NA	2	1	TRUE	NA	NA	NA	C	coding	658	1977	910	2886	20.0	0	True	AATAAA	-19
PB.9645.6	chr5	+	2351	15	novel_in_catalog	RGS14	novel	2415	15	NA	NA	66	-1	combination_of_known_junctions	FALSE	canonical	1	65610	junction_1	85177.3287794352	NA	0	NA	TRUE	NA	NA	NA	B	coding	567	1704	123	1826	5.0	-21	True	NA	NA
PB.9645.5	chr5	+	2690	14	novel_in_catalog	RGS14	novel	2415	15	NA	NA	55	1	intron_retention	FALSE	canonical	1	65610	junction_1	88391.97210535896	NA	1	NA	TRUE	NA	NA	NA	B	coding	337	1014	1155	2168	10.0	-32	True	NA	NA
PB.9645.4	chr5	+	2859	13	novel_in_catalog	RGS14	novel	2415	15	NA	NA	42	1	intron_retention	FALSE	canonical	1	65610	junction_1	88484.96548107763	NA	0	NA	TRUE	NA	NA	NA	B	coding	337	1014	1324	2337	10.0	-45	True	NA	NA
PB.12025.8	chrX	-	1929	14	incomplete-splice_match	RPGR	ENST00000642739.1	2766	18	-16	7178	1	-3162	3prime_fragment	FALSE	canonical	1	29723	junction_1	20761.463608609047	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	177	1928	45.0	-9	True	NA	NA
PB.9645.2	chr5	+	2273	14	novel_in_catalog	RGS14	novel	2415	15	NA	NA	29	1	no_combination_of_known_junctions	FALSE	canonical	1	4294	junction_6	103008.6134614695	NA	0	NA	TRUE	NA	NA	NA	B	coding	241	726	1026	1751	10.0	-58	True	NA	NA
PB.9645.1	chr5	+	2717	1	novel_in_catalog	RGS14	novel	2415	15	NA	NA	13	-6991	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	132	399	633	1031	100.0	-74	True	NA	NA
PB.5315.1	chr17	+	1839	2	incomplete-splice_match	NDUFAF8	ENST00000573090.1	741	3	8	-63	8	-2	intron_retention	FALSE	canonical	1	160168	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	101	306	431	736	10.0	0	True	GATAAA	-16
PB.8663.1	chr4	-	2190	11	full-splice_match	NELFA	ENST00000411638.6	2199	11	2	7	-1	0	multi-exon	FALSE	canonical	1	215966	junction_10	82616.31233818173	NA	2	NA	TRUE	NA	NA	NA	C	coding	528	1587	15	1601	45.0	-2	True	ATTAAA	-14
PB.8663.2	chr4	-	1871	11	full-splice_match	NELFA	ENST00000411638.6	2199	11	1	327	1	-320	multi-exon	FALSE	canonical	1	215966	junction_10	82616.31233818173	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	16	1602	50.0	-3	True	AGTAAA	-7
PB.6780.12	chr2	+	4912	28	novel_in_catalog	RIF1	novel	7897	36	NA	NA	14	8905	intron_retention	FALSE	canonical	1	10360	junction_6	61484.70762316571	NA	1	NA	TRUE	NA	NA	NA	C	coding	1467	4401	511	4911	70.0	12	True	NA	NA
PB.179.5	chr1	-	2630	7	novel_in_catalog	RUNX3	novel	4340	6	NA	NA	-72	-24	no_combination_of_known_junctions	FALSE	canonical	1	1773	junction_6	140179.75150221313	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	272	1561	95.0	-3	True	NA	NA
PB.179.4	chr1	-	2636	5	novel_in_catalog	RUNX3	novel	4340	6	NA	NA	3	-24	no_combination_of_known_junctions	FALSE	canonical	1	19951	junction_4	141326.77147748758	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	437	1567	95.0	-2	True	NA	NA
PB.179.9	chr1	-	2135	5	full-splice_match	RUNX3	ENST00000496967.1	572	5	-44	-1519	-44	-24	multi-exon	FALSE	canonical	1	1195	junction_4	136737.30302001536	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	146	1066	95.0	0	True	NA	NA
PB.6780.13	chr2	+	6145	29	incomplete-splice_match	RIF1	ENST00000430328.6	7992	34	-175	10232	15	10046	3prime_fragment	FALSE	canonical	1	108790	junction_2	50688.45095688133	NA	0	NA	TRUE	NA	NA	NA	C	coding	1878	5634	510	6143	70.0	13	True	NA	NA
PB.11283.8	chr8	-	2386	4	full-splice_match	KLF10	ENST00000285407.10	3097	4	176	535	176	-528	multi-exon	FALSE	canonical	1	384119	junction_3	174255.745539582	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	126	1568	70.0	-4	True	NA	NA
PB.6658.1	chr2	+	1814	6	full-splice_match	PDCL3	ENST00000264254.10	1337	6	258	-735	258	735	multi-exon	FALSE	canonical	1	205	junction_4	140899.73387966352	NA	3	NA	TRUE	NA	NA	NA	A	coding	239	720	121	840	25.0	-45	True	AATAAA	-14
PB.5768.1	chr19	+	4555	7	novel_not_in_catalog	NACC1	novel	534	2	NA	NA	-1257	0	intron_retention	FALSE	canonical	1	34750	junction_2	336913.3723834742	NA	1	NA	TRUE	NA	NA	NA	A	coding	527	1584	237	1820	20.0	-6	True	AATAAA	-15
PB.4906.5	chr17	-	1857	13	full-splice_match	NLE1	ENST00000442241.8	2588	13	16	715	-2	9	multi-exon	FALSE	canonical	1	95040	junction_12	70934.78549632558	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	25	1482	10.0	-3	True	NA	NA
PB.8017.5	chr3	-	1811	10	novel_not_in_catalog	ACAA1	novel	964	3	NA	NA	-4	0	intron_retention	TRUE	non_canonical	0	0	junction_6	313298.0110434437	NA	6	1	TRUE	NA	NA	NA	C	coding	162	489	992	1480	10.0	-24	True	AGTAAA	-14
PB.8017.4	chr3	-	2109	9	novel_in_catalog	ACAA1	novel	964	3	NA	NA	4	0	intron_retention	FALSE	canonical	1	111063	junction_5	287857.4043588031	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	560	892	10.0	26	False	AGTAAA	-14
PB.8017.3	chr3	-	2114	10	novel_in_catalog	ACAA1	novel	964	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	450286	junction_9	184672.0406386801	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	58	894	5.0	-16	True	AGTAAA	-17
PB.4906.1	chr17	-	5169	13	full-splice_match	NLE1	ENST00000442241.8	2588	13	12	-2593	0	-1	multi-exon	FALSE	canonical	1	95040	junction_12	70934.78549632558	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	29	1486	25.0	-7	True	NA	NA
PB.4906.2	chr17	-	2666	12	novel_not_in_catalog	NLE1	novel	5286	12	NA	NA	12	-2	any annotated donor/acceptor	FALSE	canonical	1	2302	junction_3	110501.06396039888	NA	2	1	TRUE	NA	NA	NA	C	coding	113	342	987	1328	10.0	9033	False	TATAAA	-15
PB.4906.3	chr17	-	2595	13	full-splice_match	NLE1	ENST00000442241.8	2588	13	-9	2	-9	-2	multi-exon	FALSE	canonical	1	95040	junction_12	70934.78549632558	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	50	1507	10.0	8930	False	TATAAA	-15
PB.1874.4	chr11	+	2314	6	full-splice_match	RCN1	ENST00000054950.3	2572	6	227	31	227	-31	multi-exon	FALSE	canonical	1	807	junction_4	94884.64454778761	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	67	1062	20.0	6	True	AATAAA	-20
PB.1874.1	chr11	+	2615	6	novel_in_catalog	AL035078.4	novel	527	4	NA	NA	274535	871	intron_retention	FALSE	canonical	1	14820	junction_4	89831.54599894182	NA	0	NA	TRUE	NA	NA	NA	A	coding	265	798	279	1076	5.0	-31	True	AATAAA	-20
PB.1874.3	chr11	+	2139	6	full-splice_match	RCN1	ENST00000054950.3	2572	6	210	223	210	0	multi-exon	FALSE	canonical	1	807	junction_4	94884.64454778761	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	84	1079	5.0	-832	False	AATAAA	-16
PB.1874.2	chr11	+	1504	6	full-splice_match	RCN1	ENST00000054950.3	2572	6	90	978	90	93	multi-exon	FALSE	canonical	1	807	junction_4	94884.64454778761	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	204	1199	30.0	1	True	ATTAAA	-22
PB.6780.18	chr2	+	10152	35	full-splice_match	RIF1	ENST00000243326.9	15003	35	19	4832	4	1718	multi-exon	FALSE	canonical	1	108790	junction_2	55471.1054026247	NA	4	NA	TRUE	NA	NA	NA	C	coding	2472	7419	465	7883	35.0	58	True	AATAAA	-21
PB.6884.2	chr2	+	3299	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-12	16842	-12	158	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	2	NA	TRUE	NA	NA	NA	C	coding	793	2382	428	2809	40.0	0	True	TATAAA	-35
PB.693.4	chr1	+	2037	17	incomplete-splice_match	CHD1L	ENST00000369258.8	2967	23	-7	10283	-7	9232	3prime_fragment	FALSE	canonical	1	174357	junction_1	119881.70680084753	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2010	28	2037	40.0	-9	True	NA	NA
PB.4601.1	chr16	-	691	6	full-splice_match	CYBA	ENST00000261623.7	797	6	99	7	1	-7	multi-exon	FALSE	canonical	1	2099100	junction_4	1495414.7340824215	NA	0	NA	TRUE	NA	NA	NA	A	coding	195	588	41	628	10.0	-1	True	AATAAA	-16
PB.12039.2	chrX	-	3771	6	full-splice_match	ZNF674	ENST00000522017.5	591	6	37	-3217	0	3210	multi-exon	FALSE	canonical	1	6230	junction_1	9872.824580635473	NA	3	NA	TRUE	NA	NA	NA	C	coding	103	312	3121	3432	25.0	-16	True	NA	NA
PB.2860.5	chr12	-	2560	20	novel_in_catalog	APPL2	novel	3239	21	NA	NA	-26	220	no_combination_of_known_junctions	FALSE	canonical	1	27527	junction_2	82697.23769472563	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	108	1961	65.0	-27	True	NA	NA
PB.2860.4	chr12	-	2781	21	full-splice_match	APPL2	ENST00000258530.7	3239	21	57	401	22	238	multi-exon	FALSE	canonical	1	156530	junction_20	61259.122239548946	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	170	2164	40.0	66	False	AATAAA	-13
PB.2860.3	chr12	-	2990	20	novel_in_catalog	APPL2	novel	3239	21	NA	NA	-23	-3	no_combination_of_known_junctions	FALSE	canonical	1	9044	junction_14	99439.79725829132	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	105	1976	15.0	-24	True	AATAAA	-31
PB.2860.2	chr12	-	3030	20	novel_in_catalog	APPL2	novel	3239	21	NA	NA	29	-3	no_combination_of_known_junctions	FALSE	canonical	1	27527	junction_2	82697.23769472563	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	163	2016	15.0	73	False	AATAAA	-31
PB.2860.1	chr12	-	3185	21	full-splice_match	APPL2	ENST00000258530.7	3239	21	52	2	17	-1	multi-exon	FALSE	canonical	1	156530	junction_20	61259.122239548946	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	175	2169	15.0	61	False	AATAAA	-33
PB.6835.1	chr2	+	4769	11	full-splice_match	HAT1	ENST00000264108.4	1626	11	-41	-3102	-24	3102	multi-exon	FALSE	canonical	1	339978	junction_1	200738.04245174857	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	78	1337	20.0	-11	True	GATAAA	-29
PB.1088.5	chr1	+	5563	18	novel_in_catalog	CR2	novel	4063	19	NA	NA	99	-15	intron_retention	FALSE	canonical	1	47041	junction_1	28029.249780656563	NA	2	NA	TRUE	NA	NA	NA	C	coding	875	2628	2179	4806	60.0	1	True	AATAAA	-11
PB.6835.3	chr2	+	1559	11	full-splice_match	HAT1	ENST00000264108.4	1626	11	13	54	13	5	multi-exon	FALSE	canonical	1	339978	junction_1	200738.04245174857	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	24	1283	30.0	12	True	AATAAA	-19
PB.6835.2	chr2	+	4502	11	full-splice_match	HAT1	ENST00000264108.4	1626	11	-41	-2835	-24	2835	multi-exon	FALSE	canonical	1	339978	junction_1	200738.04245174857	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	78	1337	25.0	-11	True	AATAAA	-40
PB.6835.5	chr2	+	1756	12	novel_not_in_catalog	HAT1	novel	1567	10	NA	NA	11	4	any annotated donor/acceptor	TRUE	canonical	1	12705	junction_1	354316.1931046177	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	240	1481	30.0	10	True	AATAAA	-18
PB.6835.4	chr2	+	1508	10	full-splice_match	HAT1	ENST00000412731.5	1567	10	0	59	0	0	multi-exon	FALSE	canonical	1	27484	junction_2	330771.1703345216	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	233	1237	30.0	-18	True	AATAAA	-14
PB.1088.2	chr1	+	4140	20	full-splice_match	CR2	ENST00000367057.7	4240	20	98	2	98	-2	multi-exon	TRUE	canonical	1	20177	junction_10	41939.7499652396	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	92	3370	20.0	0	True	AATAAA	-24
PB.5401.16	chr18	-	2800	16	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	70	-176	no_combination_of_known_junctions	FALSE	canonical	1	15673	junction_2	155148.42837526766	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	163	2355	40.0	-36	True	ATTAAA	-14
PB.5301.2	chr17	+	3641	21	novel_in_catalog	GAA	novel	956	4	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	1	10728	junction_2	179748.49894323872	NA	1	NA	TRUE	NA	NA	NA	C	coding	952	2859	232	3090	5.0	-9	True	AATAAA	-20
PB.5301.3	chr17	+	3567	21	full-splice_match	GAA	ENST00000390015.7	3549	21	-16	-2	-9	0	multi-exon	FALSE	canonical	1	146648	junction_2	163080.1046846227	NA	1	NA	TRUE	NA	NA	NA	C	coding	952	2859	161	3019	5.0	-3	True	AATAAA	-17
PB.5301.1	chr17	+	3526	20	novel_in_catalog	GAA	novel	956	4	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	1	76037	junction_1	156093.978377258	NA	1	NA	TRUE	NA	NA	NA	C	coding	952	2859	118	2976	0.0	-10	True	AATAAA	-19
PB.11655.2	chr9	-	1290	4	full-splice_match	NINJ1	ENST00000375446.4	1281	4	-17	8	-17	0	multi-exon	FALSE	canonical	1	292023	junction_3	221210.9717778232	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	89	547	15.0	1980	False	AATAAA	-24
PB.1117.20	chr1	-	2111	9	full-splice_match	ANGEL2	ENST00000366962.7	4649	9	-41	2579	-41	-32	multi-exon	FALSE	canonical	1	69654	junction_8	53445.3273552457	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	197	1831	35.0	-14	True	AGTAAA	-17
PB.5301.4	chr17	+	2951	19	novel_not_in_catalog	GAA	novel	956	4	NA	NA	-7	1	any annotated donor/acceptor	TRUE	canonical	1	30	junction_18	175426.69930512147	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	159	2666	5.0	-1	True	AATAAA	-16
PB.5301.5	chr17	+	3714	20	full-splice_match	GAA	ENST00000302262.7	3626	20	-88	0	19	0	multi-exon	FALSE	canonical	1	146648	junction_1	146068.73166975947	NA	1	NA	TRUE	NA	NA	NA	C	coding	952	2859	308	3166	5.0	-8338	False	AATAAA	-17
PB.10470.8	chr7	+	2436	17	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	-9	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	521638.9594960382	NA	63	7	TRUE	NA	NA	NA	B	coding	515	1548	48	1595	35.0	-9	True	ATTAAA	-16
PB.10470.9	chr7	+	6048	16	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	16	-3	intron_retention	FALSE	non_canonical	0	0	junction_12	690128.8271806134	NA	2	NA	TRUE	NA	NA	NA	B	coding	350	1053	23	1075	25.0	16	True	ATTAAA	-19
PB.10470.2	chr7	+	2587	18	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	-6	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	710425.1911880967	NA	0	NA	TRUE	NA	NA	NA	B	coding	616	1851	570	2420	35.0	-52	True	ATTAAA	-16
PB.10470.3	chr7	+	2523	18	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	-5	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	710068.6207020044	NA	1	NA	TRUE	NA	NA	NA	B	coding	392	1179	1173	2351	15.0	-51	True	ATTAAA	-21
PB.10470.4	chr7	+	2263	17	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	28	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	521638.9594960382	NA	0	NA	TRUE	NA	NA	NA	B	coding	739	2220	11	2230	85.0	28	True	NA	NA
PB.10470.5	chr7	+	2603	18	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	-1	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	707267.2296647918	NA	1	NA	TRUE	NA	NA	NA	B	coding	570	1713	83	1795	35.0	-44	True	ATTAAA	-16
PB.10470.6	chr7	+	5932	15	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	19	-6	intron_retention	FALSE	non_canonical	0	0	junction_11	498350.46274190047	NA	2	NA	TRUE	NA	NA	NA	B	coding	650	1953	63	2015	35.0	-24	True	ATTAAA	-16
PB.10470.7	chr7	+	2588	18	novel_not_in_catalog	GARS	novel	2634	17	NA	NA	-10	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	708992.3975915121	NA	1	NA	TRUE	NA	NA	NA	B	coding	392	1179	1243	2421	35.0	-10	True	ATTAAA	-16
PB.11625.17	chr9	-	2754	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	897480.8453867539	NA	3	2	TRUE	NA	NA	NA	B	coding	222	669	856	1524	15.0	-1	True	AATAAA	-21
PB.9869.3	chr6	+	2037	4	incomplete-splice_match	MICB	ENST00000252229.6	2446	6	8026	7	206	-6	5prime_fragment	FALSE	canonical	1	116307	junction_3	32389.640497473192	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	164	829	30.0	7996	False	NA	NA
PB.10825.6	chr7	-	2612	17	novel_in_catalog	IMPDH1	novel	2295	14	NA	NA	0	3	no_combination_of_known_junctions	FALSE	canonical	1	390	junction_15	139538.5850570187	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	351	1895	20.0	-1	True	AATAAA	-14
PB.2816.1	chr12	+	2132	9	full-splice_match	AMDHD1	ENST00000266736.6	2260	9	3	125	3	2	multi-exon	FALSE	canonical	1	15742	junction_1	15976.33837458931	NA	0	NA	TRUE	NA	NA	NA	A	coding	426	1281	104	1384	10.0	3	True	AATAAA	-18
PB.10825.4	chr7	-	2692	13	novel_in_catalog	IMPDH1	novel	2295	14	NA	NA	-51	-6	intron_retention	FALSE	canonical	1	128548	junction_12	106902.12892287532	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	136	1560	15.0	-5	True	AATAAA	-20
PB.10825.5	chr7	-	2686	16	novel_in_catalog	IMPDH1	novel	2295	14	NA	NA	0	3	intron_retention	FALSE	canonical	1	27630	junction_15	129609.65501734645	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	425	1969	20.0	-1	True	AATAAA	-14
PB.10825.2	chr7	-	2512	15	full-splice_match	IMPDH1	ENST00000348127.10	2479	15	-12	-21	-8	-2	multi-exon	FALSE	canonical	1	73315	junction_14	113496.20386398707	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	94	1785	10.0	-13	True	AATAAA	-24
PB.10825.3	chr7	-	2327	13	full-splice_match	IMPDH1	ENST00000496200.5	2283	13	-47	3	-47	-3	multi-exon	FALSE	canonical	1	27101	junction_10	128036.07044270658	NA	1	1	TRUE	NA	NA	NA	C	coding	489	1470	132	1601	15.0	-1	True	AATAAA	-23
PB.777.15	chr1	+	3951	27	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	1	105541	junction_1	365256.27145560744	NA	1	NA	TRUE	NA	NA	NA	C	coding	1086	3261	132	3392	5.0	-5	True	TATAAA	-21
PB.10985.15	chr8	+	1779	7	full-splice_match	FDFT1	ENST00000528643.5	1909	7	-18	148	-18	-1	multi-exon	FALSE	canonical	1	1890	junction_1	1036930.0359148982	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	424	1422	30.0	-15	False	ATTAAA	-20
PB.1117.22	chr1	-	2195	9	novel_not_in_catalog	ANGEL2	novel	4649	9	NA	NA	5	-33	any annotated donor/acceptor	FALSE	canonical	1	9642	junction_8	69364.3699278266	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	348	1916	35.0	-2	True	AGTAAA	-16
PB.9151.1	chr5	+	3524	10	incomplete-splice_match	TRIO	ENST00000344204.8	11100	57	344478	1	-268	0	5prime_fragment	FALSE	canonical	1	275064	junction_1	128437.07792188013	NA	2	NA	TRUE	NA	NA	NA	B	coding	572	1719	25	1743	10.0	-4399	False	ATTAAA	-13
PB.10985.11	chr8	+	2038	8	full-splice_match	FDFT1	ENST00000528812.5	2013	8	-18	-7	-18	0	multi-exon	FALSE	canonical	1	9933	junction_1	963306.9288672394	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	619	1680	30.0	-6147	False	ATTAAA	-21
PB.10985.10	chr8	+	1747	8	full-splice_match	FDFT1	ENST00000528812.5	2013	8	-28	294	-28	53	multi-exon	FALSE	canonical	1	9933	junction_1	963306.9288672394	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	629	1690	15.0	-6157	False	CATAAA	-23
PB.10985.13	chr8	+	1802	7	full-splice_match	FDFT1	ENST00000525954.5	1890	7	418	-330	44	-7	multi-exon	FALSE	canonical	1	2356622	junction_5	245477.5399621906	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	53	1114	25.0	-306	False	AATAAA	-18
PB.6130.5	chr19	+	1498	15	full-splice_match	RUVBL2	ENST00000595090.5	2009	15	441	70	0	-1	multi-exon	FALSE	canonical	1	347222	junction_1	482511.2585789146	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	24	1415	15.0	2	True	TATAAA	-17
PB.4226.15	chr16	-	3142	17	novel_not_in_catalog	GLYR1	novel	3606	14	NA	NA	1	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	178755.92974779886	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	14	1675	15.0	9	True	AATAAA	-18
PB.4226.14	chr16	-	3293	16	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	58926	junction_9	182361.9956853096	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	24	1634	15.0	-1	True	AATAAA	-18
PB.4226.16	chr16	-	3102	16	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	54617	junction_12	185242.6471587289	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	25	1443	15.0	-2	True	AATAAA	-18
PB.4226.11	chr16	-	3476	15	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	54617	junction_11	198090.06396540016	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	44	1444	15.0	-21	True	AATAAA	-18
PB.4226.10	chr16	-	3495	15	full-splice_match	GLYR1	ENST00000436648.9	3466	15	-30	1	-21	-1	multi-exon	FALSE	canonical	1	54617	junction_11	177680.98903790975	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	45	1463	15.0	-22	True	AATAAA	-18
PB.4226.13	chr16	-	3327	17	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	72836	junction_7	175201.90867555808	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	25	1668	15.0	-2	True	AATAAA	-18
PB.4226.12	chr16	-	3344	17	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	177185	junction_1	153285.13171250856	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	24	1685	15.0	-1	True	AATAAA	-18
PB.9869.2	chr6	+	2476	6	full-splice_match	MICB	ENST00000252229.6	2446	6	-37	7	-8	-6	multi-exon	FALSE	canonical	1	26928	junction_1	61114.16784347145	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	117	1268	30.0	0	True	NA	NA
PB.4226.18	chr16	-	3283	16	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	58926	junction_9	201397.92801379284	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	33	1625	15.0	-10	True	AATAAA	-17
PB.11011.3	chr8	+	3418	28	novel_not_in_catalog	XPO7	novel	4861	28	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	2105	junction_27	126792.11431874768	NA	1	NA	TRUE	NA	NA	NA	C	coding	1107	3321	98	3418	25.0	7	True	AATAAA	-19
PB.2158.3	chr11	+	2187	1	novel_in_catalog	PPME1	novel	2677	14	NA	NA	12	-32458	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-10	True	AATGAA	-12
PB.2158.2	chr11	+	2626	15	novel_not_in_catalog	PPME1	novel	2677	14	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	35	junction_4	221903.1806922716	NA	13	1	TRUE	NA	NA	NA	C	coding	256	771	664	1434	5.0	-14	True	AATAAA	-16
PB.2158.1	chr11	+	2360	14	full-splice_match	PPME1	ENST00000328257.12	2677	14	316	1	72	0	multi-exon	FALSE	canonical	1	386061	junction_1	86569.22556889159	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	98	1168	5.0	2	True	AATAAA	-16
PB.642.13	chr1	-	7054	11	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	-10873	-110	any annotated donor/acceptor	FALSE	canonical	1	34	junction_10	50764.07083006642	NA	4	NA	TRUE	NA	NA	NA	C	coding	1194	3585	677	4261	20.0	NA	False	AAAAAG	-32
PB.226.7	chr1	+	3441	13	full-splice_match	PHACTR4	ENST00000373836.4	3107	13	49	-383	49	141	multi-exon	FALSE	canonical	1	19541	junction_1	81202.86328024231	NA	4	NA	TRUE	NA	NA	NA	C	coding	712	2139	166	2304	95.0	-51	False	NA	NA
PB.642.15	chr1	-	7119	12	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	301	-151	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_11	56847.780840991974	NA	1	NA	TRUE	NA	NA	NA	C	coding	1214	3645	723	4367	60.0	15	True	NA	NA
PB.642.16	chr1	-	7075	11	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	285	-151	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_10	49866.38441966692	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	739	4323	60.0	-1	True	NA	NA
PB.642.17	chr1	-	6650	11	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	295	-566	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_10	49866.38441966692	NA	3	NA	TRUE	NA	NA	NA	C	coding	1194	3585	729	4313	65.0	9	True	NA	NA
PB.642.18	chr1	-	4933	11	full-splice_match	IGSF3	ENST00000369486.7	7254	11	-30	2351	-28	460	multi-exon	FALSE	canonical	1	62188	junction_10	40101.81376945437	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	797	4381	25.0	-77	False	AATATA	-42
PB.642.19	chr1	-	4892	12	full-splice_match	IGSF3	ENST00000369483.5	7326	12	54	2380	52	441	multi-exon	FALSE	canonical	1	23493	junction_6	50616.91302191164	NA	1	NA	TRUE	NA	NA	NA	C	coding	1214	3645	715	4359	45.0	5	True	AATATA	-23
PB.6130.4	chr19	+	1665	16	novel_not_in_catalog	RUVBL2	novel	2009	15	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	2957	junction_1	655806.5176371728	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	322	1578	10.0	-3	True	TATAAA	-21
PB.11625.15	chr9	-	2722	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	17	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	164	1552	20.0	-1	True	AATAAA	-18
PB.2077.3	chr11	+	2640	21	incomplete-splice_match	SF3B2	ENST00000322535.10	2903	22	25	578	-4	-341	3prime_fragment	FALSE	canonical	1	1077372	junction_1	539139.4851783627	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2616	25	2640	10.0	-3	True	NA	NA
PB.2077.2	chr11	+	2883	22	novel_not_in_catalog	SF3B2	novel	625	3	NA	NA	-9	14	any annotated donor/acceptor	FALSE	canonical	1	4221	junction_20	635601.8767360902	NA	19	3	TRUE	NA	NA	NA	C	coding	825	2478	30	2507	40.0	-8	True	AATAAA	-18
PB.2077.1	chr11	+	2977	21	novel_in_catalog	SF3B2	novel	625	3	NA	NA	-10	11	intron_retention	FALSE	canonical	1	1077372	junction_1	512692.3575698467	NA	1	1	TRUE	NA	NA	NA	C	coding	627	1884	31	1914	55.0	-9	True	AATAAA	-15
PB.11243.14	chr8	+	4203	19	full-splice_match	DPY19L4	ENST00000414645.6	6197	19	2	1992	2	-1992	multi-exon	FALSE	canonical	1	69946	junction_7	37462.42944773528	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	98	2269	40.0	2	True	AATAAA	-21
PB.2077.7	chr11	+	972	9	incomplete-splice_match	SF3B2	ENST00000322535.10	2903	22	33	10516	3	-208	3prime_fragment	FALSE	canonical	1	1077372	junction_1	167386.7881890156	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	954	17	970	40.0	5	True	NA	NA
PB.2077.6	chr11	+	2176	18	incomplete-splice_match	SF3B2	ENST00000322535.10	2903	22	29	5441	0	2771	3prime_fragment	FALSE	canonical	1	1077372	junction_1	547034.1007385531	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2154	21	2174	55.0	1	True	NA	NA
PB.2077.5	chr11	+	3286	21	novel_in_catalog	SF3B2	novel	625	3	NA	NA	-1	-13	intron_retention	FALSE	canonical	1	1077372	junction_1	539124.6125927102	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	1814	3133	35.0	0	True	AATAAA	-24
PB.2077.4	chr11	+	2855	22	full-splice_match	SF3B2	ENST00000322535.10	2903	22	28	20	-1	13	multi-exon	FALSE	canonical	1	1077372	junction_1	526154.5920481207	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	22	2709	45.0	0	True	AATAAA	-17
PB.9869.1	chr6	+	2409	6	full-splice_match	MICB	ENST00000538442.5	2411	6	-4	6	-4	-6	multi-exon	FALSE	canonical	1	72723	junction_1	45350.66688815061	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	146	1201	30.0	-3268	False	NA	NA
PB.2077.9	chr11	+	2385	19	incomplete-splice_match	SF3B2	ENST00000322535.10	2903	22	2945	6	-12	-6	5prime_fragment	FALSE	canonical	1	1096470	junction_3	483058.46847020264	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	9	2225	20.0	-4245	False	AATAAA	-31
PB.2077.8	chr11	+	2708	21	incomplete-splice_match	SF3B2	ENST00000322535.10	2903	22	336	14	-16	-14	5prime_fragment	FALSE	canonical	1	1096470	junction_5	509339.2070875263	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	115	2556	35.0	-6854	False	AATAAA	-23
PB.11988.11	chrX	-	1841	12	full-splice_match	RBBP7	ENST00000380087.6	2333	12	55	437	2	-88	multi-exon	FALSE	canonical	1	1349936	junction_10	314505.3651904897	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	307	1584	25.0	4906	False	AATACA	-26
PB.9860.2	chr6	+	3568	30	novel_in_catalog	VARS2	novel	6054	41	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	65502	junction_1	79445.1830842134	NA	1	NA	TRUE	NA	NA	NA	C	coding	1063	3192	131	3322	25.0	9	True	GATAAA	-14
PB.442.2	chr1	+	2814	11	full-splice_match	NFIA	ENST00000403491.7	9487	11	254	6419	-59	-20	multi-exon	FALSE	canonical	1	112550	junction_3	20179.521204676785	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	231	1760	95.0	-59	True	TTTAAA	-15
PB.11988.10	chrX	-	1922	12	novel_not_in_catalog	RBBP7	novel	373	5	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	6737	junction_6	575433.2411379381	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	362	1546	40.0	4851	False	AATAAA	-6
PB.442.4	chr1	+	2706	10	full-splice_match	NFIA	ENST00000371187.7	2683	10	-44	21	-44	-21	multi-exon	FALSE	canonical	1	34638	junction_9	38011.455951860706	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	216	1712	90.0	-44	True	TTTAAA	-14
PB.10114.2	chr6	-	4172	1	full-splice_match	MANEA-DT	ENST00000564541.1	2268	1	24	-1928	24	1928	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	98	297	2	298	75.0	21	True	AATACA	-43
PB.10294.3	chr6	+	2218	14	incomplete-splice_match	TIAM2	ENST00000456877.6	3275	21	34285	10	79	0	5prime_fragment	FALSE	canonical	1	30010	junction_2	141428.606929893	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	194	2149	100.0	0	True	TTTAAA	-23
PB.11625.14	chr9	-	2771	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	837804.5437126092	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	210	1598	15.0	-13	True	AATAAA	-21
PB.10114.1	chr6	-	3702	3	intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6980	junction_2	5334.5	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	32	True	NA	NA
PB.9860.1	chr6	+	3436	29	novel_in_catalog	VARS2	novel	6054	41	NA	NA	6	0	no_combination_of_known_junctions	TRUE	canonical	1	8551	junction_24	93664.46106728801	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	152	3190	25.0	-12	True	GATAAA	-14
PB.4722.29	chr17	+	2453	19	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-3	0	intron_retention	FALSE	canonical	1	648871	junction_1	833794.3812346922	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	51	1199	10.0	-3	True	AATAAA	-16
PB.4722.28	chr17	+	2138	20	full-splice_match	ACADVL	ENST00000356839.9	2323	20	177	8	35	0	multi-exon	FALSE	canonical	1	648871	junction_1	837807.8032253723	NA	6	NA	TRUE	NA	NA	NA	C	coding	655	1968	3	1970	10.0	-2987	False	AATAAA	-16
PB.4722.27	chr17	+	2270	19	full-splice_match	ACADVL	ENST00000322910.9	2352	19	82	0	0	0	multi-exon	FALSE	canonical	1	1566022	junction_1	725797.0734006854	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	363	2102	10.0	-12	True	AATAAA	-16
PB.4722.26	chr17	+	4827	5	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2425192	junction_2	566688.7126881807	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	4276	4659	10.0	-15	True	AATAAA	-16
PB.4722.25	chr17	+	3331	16	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-4	0	intron_retention	FALSE	canonical	1	648871	junction_1	844917.352716426	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	2381	3163	10.0	-16	True	AATAAA	-16
PB.4722.24	chr17	+	2833	16	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	9	0	intron_retention	FALSE	canonical	1	96265	junction_11	1044420.9360265599	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	69	896	5.0	-21	True	AATAAA	-17
PB.4722.23	chr17	+	2550	18	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	1566022	junction_1	704875.1518279907	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1569	2381	5.0	-24	True	AATAAA	-17
PB.4722.22	chr17	+	2569	18	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	648871	junction_1	817854.6468202109	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1589	2401	10.0	-24	True	AATAAA	-16
PB.4722.21	chr17	+	2661	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	648871	junction_1	805025.5379580747	NA	1	1	TRUE	NA	NA	NA	C	coding	275	828	72	899	10.0	-24	True	AATAAA	-16
PB.1662.1	chr10	-	2040	11	incomplete-splice_match	CCDC186	ENST00000648613.1	7343	17	19	14012	7	-3887	3prime_fragment	FALSE	canonical	1	46629	junction_10	52316.70586772451	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1653	386	2038	40.0	-11	True	NA	NA
PB.9385.2	chr5	+	2720	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	333	9187	10	104	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	66	1487	85.0	-9	True	AATAAA	-28
PB.9385.3	chr5	+	2712	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	235	9293	-61	-2	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	164	1585	15.0	1	True	TATAAA	-22
PB.10141.2	chr6	-	3201	6	novel_in_catalog	PDSS2	novel	3540	8	NA	NA	-7	-41	no_combination_of_known_junctions	FALSE	canonical	1	7733	junction_2	44355.02445766432	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	287	1180	80.0	-16	True	NA	NA
PB.9385.6	chr5	+	2103	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	299	9838	-1	282	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	100	1521	30.0	-1	True	AAGAAA	-39
PB.9385.7	chr5	+	3043	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	300	8897	0	394	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	4	NA	TRUE	NA	NA	NA	C	coding	473	1422	99	1520	70.0	0	True	AAAAAG	-35
PB.9385.4	chr5	+	7137	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	298	4805	-2	369	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	101	1522	40.0	-2	True	AATATA	-22
PB.9385.5	chr5	+	1723	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	247	10270	-49	18	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	152	1573	25.0	-186	False	AAAACA	-31
PB.8442.1	chr3	-	3459	16	full-splice_match	GK5	ENST00000392993.6	9837	16	-4	6382	-4	0	multi-exon	FALSE	canonical	1	59057	junction_8	28402.20576520227	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	157	1746	10.0	-27	True	ATTAAA	-22
PB.10141.5	chr6	-	3131	8	novel_not_in_catalog	PDSS2	novel	3540	8	NA	NA	-9	-41	any annotated donor/acceptor	FALSE	canonical	1	12525	junction_7	34859.62208806127	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	319	1110	80.0	-18	True	NA	NA
PB.9385.8	chr5	+	7229	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	314	4697	-9	477	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	85	1506	15.0	14	True	AATACA	-22
PB.9385.9	chr5	+	2666	10	novel_not_in_catalog	CAMK4	novel	557	6	NA	NA	-9	103	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	37016.69899576689	NA	10	1	TRUE	NA	NA	NA	C	coding	276	831	604	1434	80.0	14	True	AATAAA	-27
PB.8442.4	chr3	-	3564	16	novel_in_catalog	GK5	novel	9837	16	NA	NA	-6	-881	no_combination_of_known_junctions	FALSE	canonical	1	12646	junction_7	42314.842349542865	NA	6	NA	TRUE	NA	NA	NA	C	coding	250	753	1990	2742	10.0	-14	True	CATAAA	-18
PB.10141.4	chr6	-	3333	7	novel_in_catalog	PDSS2	novel	3540	8	NA	NA	-7	-41	no_combination_of_known_junctions	FALSE	canonical	1	1765	junction_3	42543.09396234468	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	287	1312	80.0	-16	True	NA	NA
PB.11593.3	chr9	+	2240	5	novel_not_in_catalog	FXN	novel	7471	5	NA	NA	-4	-510	any annotated donor/acceptor	FALSE	canonical	1	51	junction_4	64744.86935850593	NA	2	1	TRUE	NA	NA	NA	C	coding	164	495	26	520	25.0	-11	True	ATTAAA	-15
PB.6849.1	chr2	-	3628	17	full-splice_match	GPR155	ENST00000295500.8	3930	17	-44	346	-1	-346	multi-exon	FALSE	canonical	1	13363	junction_15	18679.1937492252	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	390	3002	85.0	-53	True	NA	NA
PB.4736.3	chr17	+	2809	4	incomplete-splice_match	FGF11	ENST00000293829.8	3063	5	535	2	-318	-2	intron_retention	FALSE	canonical	1	27716	junction_1	22461.45502855948	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	60	731	15.0	-5960	False	ATTAAA	-18
PB.4736.2	chr17	+	2361	4	novel_in_catalog	AC113189.2	novel	1975	6	NA	NA	19425	854	no_combination_of_known_junctions	FALSE	canonical	1	3932	junction_3	32213.50179660696	NA	0	NA	TRUE	NA	NA	NA	A	coding	161	486	94	579	15.0	16	True	ATTAAA	-18
PB.4736.1	chr17	+	2589	5	full-splice_match	FGF11	ENST00000293829.8	3063	5	472	2	-381	-2	multi-exon	FALSE	canonical	1	27716	junction_1	22534.716454561836	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	123	800	15.0	-6023	False	ATTAAA	-18
PB.10141.6	chr6	-	2828	6	novel_not_in_catalog	PDSS2	novel	3540	8	NA	NA	-12	-41	any annotated donor/acceptor	FALSE	canonical	1	7733	junction_2	51842.8678975228	NA	2	NA	TRUE	NA	NA	NA	C	coding	161	486	322	807	80.0	-21	True	NA	NA
PB.6849.2	chr2	-	3486	16	full-splice_match	GPR155	ENST00000392552.6	6730	16	-8	3252	0	-346	multi-exon	FALSE	canonical	1	18053	junction_15	15508.32673487232	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	248	2860	85.0	-60	True	NA	NA
PB.4736.4	chr17	+	2958	5	full-splice_match	FGF11	ENST00000575082.5	2315	5	-612	-31	251	-4	multi-exon	FALSE	canonical	1	10793	junction_1	29599.04400905543	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	485	1171	15.0	-5391	False	ATTAAA	-16
PB.3296.5	chr14	+	5916	24	full-splice_match	ARHGEF40	ENST00000298694.8	5919	24	8	-5	5	5	multi-exon	FALSE	canonical	1	52091	junction_1	55855.61217757414	NA	1	NA	TRUE	NA	NA	NA	C	coding	1519	4560	120	4679	30.0	-26	True	AATAAA	-22
PB.3356.2	chr14	-	1893	10	full-splice_match	RIPK3	ENST00000216274.9	1930	10	32	5	2	-5	multi-exon	FALSE	canonical	1	35773	junction_7	14438.745232067198	NA	0	NA	TRUE	NA	NA	NA	A	coding	518	1557	188	1744	25.0	-25	False	AATAAA	-15
PB.6849.3	chr2	-	3259	17	full-splice_match	GPR155	ENST00000295500.8	3930	17	-61	732	-4	430	multi-exon	FALSE	canonical	1	13363	junction_15	18679.1937492252	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	407	3019	40.0	-70	True	ATTAAA	-13
PB.3296.4	chr14	+	5083	23	novel_in_catalog	ARHGEF40	novel	5919	24	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	41474	junction_20	66915.45137550213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1471	4416	132	4547	25.0	-807	False	ATTAAA	-14
PB.6849.4	chr2	-	3116	16	full-splice_match	GPR155	ENST00000392552.6	6730	16	-24	3638	-10	430	multi-exon	FALSE	canonical	1	18053	junction_15	15508.32673487232	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	264	2876	40.0	-76	False	ATTAAA	-13
PB.4695.1	chr17	-	999	7	full-splice_match	SPAG7	ENST00000206020.7	1058	7	59	0	-5	0	multi-exon	FALSE	canonical	1	800123	junction_6	199258.71429689092	NA	1	NA	TRUE	NA	NA	NA	A	coding	227	684	10	693	20.0	-1	True	AATAAA	-14
PB.2067.1	chr11	+	3140	1	novel_in_catalog	SNX32	novel	2003	13	NA	NA	-14	-12444	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-53	False	NA	NA
PB.100.9	chr1	+	4526	20	novel_not_in_catalog	MFN2	novel	4531	18	NA	NA	16	-6	any annotated donor/acceptor	FALSE	canonical	1	9327	junction_11	248317.9382457396	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	184	2589	25.0	5	True	AATAAA	-11
PB.787.1	chr1	-	3321	14	novel_in_catalog	PYGO2	novel	594	3	NA	NA	-10554	-2648	no_combination_of_known_junctions	FALSE	canonical	1	23455	junction_12	513462.8786193055	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	380	1804	25.0	-32	True	ATTAAA	-29
PB.7131.8	chr20	-	2654	5	novel_in_catalog	AL136531.2	novel	1164	5	NA	NA	-24	-50606	intron_retention	FALSE	canonical	1	11142	junction_1	428559.77977253945	NA	1	NA	TRUE	NA	NA	NA	B	coding	108	327	123	449	10.0	-25	True	AATAAA	-24
PB.7131.7	chr20	-	2838	5	novel_in_catalog	AL136531.2	novel	1164	5	NA	NA	-12	-50606	intron_retention	FALSE	non_canonical	0	0	junction_1	431639.7827143456	NA	0	NA	TRUE	NA	NA	NA	B	coding	108	327	111	437	10.0	-13	True	AATAAA	-24
PB.7131.6	chr20	-	3474	4	full-splice_match	FKBP1A	ENST00000381719.7	747	4	16	-2743	-14	0	multi-exon	FALSE	canonical	1	219188	junction_1	382260.786019469	NA	2	NA	TRUE	NA	NA	NA	C	coding	108	327	15	341	10.0	5	True	AATAAA	-24
PB.7131.4	chr20	-	1436	4	full-splice_match	FKBP1A	ENST00000618612.4	1518	4	82	0	-52	0	multi-exon	FALSE	canonical	1	33644	junction_2	464676.9939495606	NA	5	NA	TRUE	NA	NA	NA	C	coding	97	294	93	386	10.0	5	True	AATAAA	-24
PB.7131.3	chr20	-	1517	5	full-splice_match	FKBP1A	ENST00000400137.8	1622	5	105	0	-19	0	multi-exon	FALSE	canonical	1	219188	junction_2	350647.2525890514	NA	3	1	TRUE	NA	NA	NA	C	coding	108	327	60	386	10.0	-4	True	AATAAA	-25
PB.7131.2	chr20	-	1666	4	full-splice_match	FKBP1A	ENST00000381724.7	976	4	-86	-604	38	2	multi-exon	FALSE	canonical	1	219188	junction_2	137538.7748875042	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	222	533	10.0	-29	True	AATAAA	-27
PB.7131.1	chr20	-	1529	10	novel_in_catalog	SDCBP2	novel	1550	9	NA	NA	-63847	-8	no_combination_of_known_junctions	FALSE	canonical	1	12919	junction_8	328590.61558558483	NA	0	NA	TRUE	NA	NA	NA	A	coding	292	879	193	1071	45.0	9	True	AATAAA	-12
PB.5655.8	chr19	-	2675	15	novel_not_in_catalog	C3	novel	708	4	NA	NA	-6994	-11810	intron_retention	FALSE	canonical	1	24934	junction_1	209658.08375651555	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1044	1631	2674	5.0	-8	True	NA	NA
PB.5655.9	chr19	-	1850	18	novel_in_catalog	C3	novel	708	4	NA	NA	-7034	-11810	no_combination_of_known_junctions	FALSE	canonical	1	21482	junction_2	196010.50196340153	NA	2	1	TRUE	NA	NA	NA	C	coding	524	1575	21	1595	5.0	-17	True	NA	NA
PB.11030.2	chr8	+	5211	10	full-splice_match	RHOBTB2	ENST00000251822.6	5451	10	238	2	-112	-2	multi-exon	FALSE	canonical	1	124442	junction_1	41754.680847676915	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	300	2483	15.0	-4	True	CATAAA	-21
PB.9340.3	chr5	-	1987	2	full-splice_match	MBLAC2	ENST00000316610.6	4280	2	-15	2308	-15	-2308	multi-exon	FALSE	canonical	1	73874	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	492	1331	15.0	-13	True	AGTAAA	-11
PB.8122.9	chr3	-	2929	6	full-splice_match	IP6K1	ENST00000321599.8	4456	6	-15	1542	0	1077	multi-exon	FALSE	canonical	1	114156	junction_5	89618.9935886361	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	336	1643	20.0	-1	True	AATAAA	-17
PB.5655.1	chr19	-	2043	18	full-splice_match	GPR108	ENST00000264080.11	2057	18	12	2	12	-2	multi-exon	FALSE	canonical	1	155382	junction_17	143416.18547358032	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	16	1647	20.0	-12	True	NA	NA
PB.8122.4	chr3	-	4122	5	full-splice_match	IP6K1	ENST00000395238.5	4117	5	-5	0	-3	0	multi-exon	FALSE	canonical	1	22850	junction_4	138912.41145479947	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	465	1295	15.0	-4	True	AATAAA	-15
PB.5655.3	chr19	-	2494	17	novel_in_catalog	C3	novel	708	4	NA	NA	-6716	-11809	intron_retention	FALSE	canonical	1	75515	junction_16	163024.4715796144	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	1447	2238	5.0	23	True	NA	NA
PB.5655.4	chr19	-	2151	17	novel_in_catalog	C3	novel	708	4	NA	NA	-7009	-11809	intron_retention	FALSE	canonical	1	155382	junction_16	146653.2882459164	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	990	1895	5.0	8	True	NA	NA
PB.5655.5	chr19	-	2108	18	full-splice_match	GPR108	ENST00000430424.8	2009	18	-69	-30	-8	0	multi-exon	FALSE	canonical	1	75515	junction_17	158159.81276911852	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	947	1852	5.0	250	False	NA	NA
PB.5655.6	chr19	-	1946	18	novel_not_in_catalog	C3	novel	708	4	NA	NA	-7040	-11809	any annotated donor/acceptor	FALSE	canonical	1	21193	junction_3	192519.64824647925	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	27	1619	5.0	-23	True	NA	NA
PB.5655.7	chr19	-	1892	18	full-splice_match	GPR108	ENST00000264080.11	2057	18	23	142	-6	0	multi-exon	FALSE	canonical	1	155382	junction_17	143416.18547358032	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	5	1636	5.0	-1	True	NA	NA
PB.3856.11	chr15	-	2851	1	novel_in_catalog	SECISBP2L	novel	7176	18	NA	NA	-30	-6232	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	33	102	550	651	75.0	-32	True	NA	NA
PB.3856.10	chr15	-	1851	12	incomplete-splice_match	SECISBP2L	ENST00000559471.5	7176	18	86	24068	-30	-1159	3prime_fragment	FALSE	canonical	1	167440	junction_11	37044.44498925559	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1671	179	1849	70.0	-32	True	NA	NA
PB.8063.6	chr3	-	2030	8	full-splice_match	ZDHHC3	ENST00000296127.7	3101	8	16	1055	0	622	multi-exon	FALSE	canonical	1	96333	junction_2	236940.45608850458	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	262	1242	10.0	-17	True	NA	NA
PB.8063.7	chr3	-	1956	7	full-splice_match	ZDHHC3	ENST00000424952.6	2687	7	0	731	0	621	multi-exon	FALSE	canonical	1	285486	junction_6	159390.8823382177	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	375	1169	10.0	-28	True	NA	NA
PB.8063.4	chr3	-	2535	6	novel_in_catalog	ZDHHC3	novel	3226	5	NA	NA	11	1	no_combination_of_known_junctions	FALSE	canonical	1	9897	junction_1	271121.17572229577	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	251	898	10.0	-6	True	AATAAA	-16
PB.8063.5	chr3	-	2760	8	full-splice_match	ZDHHC3	ENST00000296127.7	3101	8	16	325	0	0	multi-exon	FALSE	canonical	1	96333	junction_2	236940.45608850458	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	262	1242	10.0	-17	True	AATAAA	-15
PB.8063.2	chr3	-	2767	8	full-splice_match	ZDHHC3	ENST00000342790.8	1336	8	13	-1444	13	2	multi-exon	FALSE	canonical	1	3679	junction_6	278187.98920946993	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	249	1247	10.0	-4	True	AATAAA	-17
PB.7782.1	chr22	+	4915	12	full-splice_match	GTPBP1	ENST00000216044.9	5126	12	209	2	-17	-2	multi-exon	FALSE	canonical	1	247325	junction_1	98652.43873542246	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	52	2034	25.0	-12	True	AATAAA	-22
PB.6351.16	chr2	-	2380	18	incomplete-splice_match	ITSN2	ENST00000361999.7	5814	39	-296	69033	-96	14426	3prime_fragment	FALSE	canonical	1	115515	junction_17	69269.28850103375	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2040	339	2378	65.0	1684	False	AAGAAA	-23
PB.8063.1	chr3	-	3813	7	full-splice_match	ZDHHC3	ENST00000424952.6	2687	7	15	-1141	4	816	multi-exon	TRUE	canonical	1	285486	junction_6	159390.8823382177	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	258	1154	10.0	-13	True	AATAAA	-22
PB.10577.14	chr7	+	4098	11	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111745	270	no_combination_of_known_junctions	FALSE	canonical	1	14948	junction_2	125369.86442538732	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	448	1923	30.0	-3	True	AATAAA	-24
PB.10577.15	chr7	+	2771	5	novel_not_in_catalog	AC027644.4	novel	4139	13	NA	NA	111746	-23216	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	104015.11012197939	NA	0	NA	TRUE	NA	NA	NA	B	coding	173	522	107	628	25.0	-2	True	AATAAA	-18
PB.10577.16	chr7	+	3534	8	novel_not_in_catalog	AC027644.4	novel	4139	13	NA	NA	111747	269	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	110344.52094717354	NA	2	NA	TRUE	NA	NA	NA	B	coding	407	1224	137	1360	30.0	-1	True	AATAAA	-23
PB.10577.17	chr7	+	3484	9	full-splice_match	RABGEF1	ENST00000284957.9	3733	9	-26	275	-26	-270	multi-exon	FALSE	canonical	1	181567	junction_1	45576.88116180724	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	104	1579	25.0	1	True	AATAAA	-20
PB.10577.10	chr7	+	3296	8	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111738	-3	no_combination_of_known_junctions	FALSE	canonical	1	6998	junction_1	104887.78244079211	NA	1	NA	TRUE	NA	NA	NA	B	coding	325	978	417	1394	30.0	-10	True	AATAAA	-17
PB.10577.11	chr7	+	2280	4	incomplete-splice_match	RABGEF1	ENST00000284957.9	3733	9	-36	25969	-36	13460	3prime_fragment	FALSE	canonical	1	181567	junction_1	34564.9419434715	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	114	635	45.0	-9	True	AATAAA	-24
PB.10577.12	chr7	+	2311	10	full-splice_match	RABGEF1	ENST00000450873.6	2281	10	-33	3	-33	-3	multi-exon	FALSE	canonical	1	37281	junction_1	107249.65689018184	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	306	1781	15.0	-6	True	AATGAA	-13
PB.10577.13	chr7	+	3606	10	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111744	0	no_combination_of_known_junctions	FALSE	canonical	1	9842	junction_5	117603.31308111316	NA	4	NA	TRUE	NA	NA	NA	B	coding	530	1593	109	1701	25.0	-4	True	AATAAA	-20
PB.10577.18	chr7	+	1934	9	full-splice_match	RABGEF1	ENST00000284957.9	3733	9	0	1799	0	3	multi-exon	FALSE	canonical	1	181567	junction_1	45576.88116180724	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	78	1553	40.0	0	True	ATTAAA	-18
PB.4075.2	chr15	-	2926	5	novel_in_catalog	CIB1	novel	1247	7	NA	NA	10	-1	intron_retention	FALSE	canonical	1	2109982	junction_1	60345.620484733605	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-13	True	AATAAA	-15
PB.4075.1	chr15	-	2208	6	novel_in_catalog	CIB1	novel	1247	7	NA	NA	21	-1	intron_retention	FALSE	canonical	1	2109982	junction_1	57457.747169898685	NA	1	NA	TRUE	NA	NA	NA	B	coding	113	342	1424	1765	35.0	-2	True	AATAAA	-19
PB.5578.1	chr19	-	2519	2	novel_not_in_catalog	KLF16	novel	1134	3	NA	NA	7447	-1	intron_retention	FALSE	canonical	1	4226	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	134	405	1875	2279	10.0	8502	False	ATTAAA	-20
PB.7782.5	chr22	+	6661	15	novel_in_catalog	GTPBP1	novel	5126	12	NA	NA	-2	3843	intron_retention	FALSE	canonical	1	5712	junction_11	219560.80234498245	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	234	1907	90.0	3	True	NA	NA
PB.8279.1	chr3	+	2342	4	intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	493	junction_3	511.1257727365698	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	AGTAAA	-35
PB.6351.17	chr2	-	2332	18	novel_not_in_catalog	ITSN2	novel	5814	39	NA	NA	-19	14434	intron_retention	FALSE	canonical	1	837	junction_16	88931.99421933026	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2070	262	2331	70.0	-9	True	AAGAAA	-31
PB.18.2	chr1	-	5057	11	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-13	1	intron_retention	FALSE	canonical	1	614919	junction_10	318707.4745416085	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	2640	3536	20.0	-28	True	NA	NA
PB.18.3	chr1	-	4312	12	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	8385	junction_1	428576.1871858688	NA	3	NA	TRUE	NA	NA	NA	C	coding	306	921	2635	3555	25.0	-23	True	NA	NA
PB.9340.1	chr5	-	3810	2	full-splice_match	MBLAC2	ENST00000316610.6	4280	2	463	7	73	-7	multi-exon	FALSE	canonical	1	73874	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	14	853	40.0	465	False	AATAAA	-14
PB.18.1	chr1	-	4032	12	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	1	intron_retention	FALSE	canonical	1	4188	junction_6	429427.86764705996	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	1615	2511	20.0	-23	True	NA	NA
PB.18.6	chr1	-	3110	11	full-splice_match	CCNL2	ENST00000400809.7	2305	11	-22	-783	-6	-1	multi-exon	FALSE	canonical	1	120035	junction_6	414450.8096978941	NA	2	NA	TRUE	NA	NA	NA	C	coding	520	1563	29	1591	25.0	-21	True	NA	NA
PB.18.7	chr1	-	4277	11	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	614919	junction_10	318707.4745416085	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	2632	3528	15.0	-20	True	AATAAA	-35
PB.18.4	chr1	-	3947	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	101290	junction_6	410179.58636860596	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	1532	2428	25.0	-23	True	NA	NA
PB.4990.10	chr17	-	3355	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	149719	junction_2	283068.4771929515	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	220	2388	100.0	-1	True	NA	NA
PB.18.8	chr1	-	3252	12	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-7	0	intron_retention	FALSE	canonical	1	17735	junction_10	493911.8014870654	NA	7	1	TRUE	NA	NA	NA	C	coding	298	897	1607	2503	15.0	-22	True	AATAAA	-35
PB.18.9	chr1	-	4390	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-12	1	intron_retention	FALSE	canonical	1	38349	junction_4	498695.85941724124	NA	3	NA	TRUE	NA	NA	NA	C	coding	226	681	35	715	20.0	-27	True	AATAAA	-23
PB.874.3	chr1	+	1924	12	novel_in_catalog	NDUFS2	novel	681	4	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1001715	junction_1	256443.98304370942	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	18	806	25.0	2	True	AATAAA	-27
PB.874.2	chr1	+	1844	13	full-splice_match	NDUFS2	ENST00000392179.4	2064	13	220	0	-5	0	multi-exon	FALSE	canonical	1	1001715	junction_1	269327.90965547715	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	20	1393	25.0	0	True	AATAAA	-27
PB.874.1	chr1	+	1610	14	incomplete-splice_match	NDUFS2	ENST00000367993.7	2042	15	3052	3	-5	0	5prime_fragment	FALSE	canonical	1	1001715	junction_1	259074.82099240852	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	20	1411	25.0	0	True	AATAAA	-27
PB.8011.6	chr3	-	2401	15	full-splice_match	LRRFIP2	ENST00000421276.6	2522	15	-6	127	-6	-127	multi-exon	FALSE	canonical	1	278383	junction_14	192362.32862275394	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	407	1681	15.0	-23	True	AATACA	-22
PB.11295.25	chr8	+	1745	7	full-splice_match	OXR1	ENST00000297447.10	1944	7	47	152	-31	3	multi-exon	FALSE	canonical	1	23452	junction_1	103922.0656594001	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	91	822	60.0	1	True	AATATA	-18
PB.4990.12	chr17	-	3428	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	103367	junction_23	264446.7362292213	NA	7	1	TRUE	NA	NA	NA	C	coding	770	2313	243	2555	100.0	-43	True	NA	NA
PB.11295.24	chr8	+	1812	6	full-splice_match	OXR1	ENST00000449762.6	2621	6	141	668	-32	-5	multi-exon	FALSE	canonical	1	51991	junction_1	107745.3236936063	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	92	742	80.0	0	True	NA	NA
PB.11702.5	chr9	+	2481	10	full-splice_match	FKTN	ENST00000223528.6	7364	10	1	4882	1	-2	multi-exon	FALSE	canonical	1	16618	junction_1	24403.338434841902	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	124	1509	40.0	-1	True	AATATA	-12
PB.7052.8	chr2	-	6469	42	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-16	227	combination_of_known_junctions	FALSE	canonical	1	74585	junction_39	274976.31091231457	NA	0	NA	TRUE	NA	NA	NA	C	coding	1996	5991	139	6129	15.0	26	True	AATAAA	-17
PB.7052.7	chr2	-	7421	41	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-3	1058	intron_retention	FALSE	canonical	1	238440	junction_40	260537.37926898204	NA	5	2	TRUE	NA	NA	NA	C	coding	2025	6078	173	6250	15.0	-8	True	AATAAA	-14
PB.7052.6	chr2	-	7547	42	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	0	1058	intron_retention	FALSE	canonical	1	75902	junction_25	275289.52626731986	NA	2	1	TRUE	NA	NA	NA	C	coding	2068	6207	170	6376	15.0	-5	True	AATAAA	-14
PB.7052.1	chr2	-	9596	41	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-4	-371	intron_retention	TRUE	canonical	1	238440	junction_40	260537.37926898204	NA	1	NA	TRUE	NA	NA	NA	C	coding	2025	6078	174	6251	75.0	-9	True	NA	NA
PB.11295.20	chr8	+	2467	7	full-splice_match	OXR1	ENST00000297447.10	1944	7	22	-545	22	-118	multi-exon	FALSE	canonical	1	23452	junction_1	103922.0656594001	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	116	847	15.0	-24	True	AATAAA	-19
PB.10124.24	chr6	-	2875	3	full-splice_match	PNISR	ENST00000466057.1	2850	3	-45	20	5	-20	multi-exon	FALSE	canonical	1	888372	junction_2	64328.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	1859	2164	100.0	4	True	NA	NA
PB.10124.21	chr6	-	2446	5	full-splice_match	PNISR	ENST00000498075.1	1027	5	-43	-1376	-5	581	multi-exon	FALSE	canonical	1	94998	junction_1	354382.3900167727	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-6	True	AATAAA	-15
PB.10124.20	chr6	-	1539	11	incomplete-splice_match	PNISR	ENST00000369239.9	5112	12	-11	4493	-11	-1082	3prime_fragment	FALSE	canonical	1	597170	junction_9	129866.13043900246	NA	1	1	TRUE	NA	NA	NA	C	coding	441	1323	217	1539	25.0	-12	True	GATAAA	-7
PB.10124.23	chr6	-	1534	5	full-splice_match	PNISR	ENST00000498075.1	1027	5	-33	-474	5	-321	multi-exon	FALSE	canonical	1	94998	junction_1	354382.3900167727	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	4	True	NA	NA
PB.10124.22	chr6	-	2221	5	full-splice_match	PNISR	ENST00000498075.1	1027	5	-32	-1162	6	367	multi-exon	FALSE	canonical	1	94998	junction_1	354382.3900167727	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	5	True	ATTAAA	-15
PB.7462.2	chr21	+	3555	23	novel_not_in_catalog	USP25	novel	3973	24	NA	NA	-10367	-1	any annotated donor/acceptor	FALSE	canonical	1	10314	junction_1	104828.69433402698	NA	0	NA	TRUE	NA	NA	NA	B	coding	834	2505	616	3120	25.0	NA	False	AATAAA	-27
PB.7462.1	chr21	+	3761	25	novel_not_in_catalog	USP25	novel	3973	24	NA	NA	331	-5	any annotated donor/acceptor	TRUE	canonical	1	19556	junction_11	118716.14611401827	NA	0	NA	TRUE	NA	NA	NA	B	coding	651	1956	1375	3330	25.0	-647	False	AATAAA	-23
PB.2156.1	chr11	+	3086	13	novel_not_in_catalog	PAAF1	novel	1383	12	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	160	junction_12	96236.2401363249	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	54	1232	90.0	-30	False	NA	NA
PB.459.10	chr1	+	3844	14	novel_not_in_catalog	MIER1	novel	3595	14	NA	NA	106	-371	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	110987.89796909227	NA	3	NA	TRUE	NA	NA	NA	C	coding	458	1377	44	1420	45.0	-4	True	ATTAAA	-11
PB.2156.2	chr11	+	1566	12	full-splice_match	PAAF1	ENST00000310571.7	4994	12	29	3399	1	0	multi-exon	FALSE	canonical	1	150631	junction_2	58909.365529943505	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	25	1203	40.0	-1	True	AATAAA	-15
PB.10983.5	chr8	+	3201	10	incomplete-splice_match	BLK	ENST00000259089.8	2606	13	385	4601	-4	3215	3prime_fragment	FALSE	canonical	1	143771	junction_2	19058.367530131753	NA	3	NA	TRUE	NA	NA	NA	C	coding	381	1146	208	1353	35.0	-1	True	AATAAA	-12
PB.7779.1	chr22	+	1135	5	full-splice_match	CBY1	ENST00000216029.7	1133	5	-12	10	3	0	multi-exon	FALSE	canonical	1	196951	junction_1	37019.4528964165	NA	0	NA	TRUE	NA	NA	NA	A	coding	126	381	147	527	35.0	-17	True	ATTAAA	-8
PB.7911.15	chr3	-	2311	4	novel_not_in_catalog	OXTR	novel	4364	4	NA	NA	-81	-1741	any annotated donor/acceptor	FALSE	canonical	1	1209	junction_3	51945.56368823895	NA	4	NA	TRUE	NA	NA	NA	C	coding	389	1170	314	1483	65.0	854	False	NA	NA
PB.780.3	chr1	-	6433	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	392845.4755910805	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	925	3720	85.0	4	True	AATATA	-11
PB.3208.33	chr13	-	2117	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	-366	2720	-366	-9	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1575	541	2115	45.0	-553	False	AATAAA	-15
PB.2079.1	chr11	-	2840	2	antisense	novelGene_PACS1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	496	junction_1	0.0	NA	19	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-1	True	NA	NA
PB.6913.1	chr2	-	3051	2	full-splice_match	CAVIN2	ENST00000304141.4	3229	2	156	22	156	-22	multi-exon	FALSE	canonical	1	261758	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	175	1452	70.0	-16	True	AATAAA	-4
PB.10603.10	chr7	+	1840	13	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	4	-5	any annotated donor/acceptor	FALSE	canonical	1	6563	junction_9	190880.10979531688	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	109	939	35.0	1	True	AATAAA	-13
PB.10603.11	chr7	+	3167	14	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	1214	-4	any annotated donor/acceptor	FALSE	canonical	1	161	junction_1	178459.68244310058	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	1534	2265	35.0	-9199	False	AATAAA	-14
PB.10983.2	chr8	+	3321	13	novel_not_in_catalog	BLK	novel	2159	12	NA	NA	-33	-1	intron_retention	FALSE	canonical	1	18665	junction_8	48395.778409998966	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	2098	2826	10.0	-3	True	AATAAA	-20
PB.7458.1	chr21	-	3875	5	full-splice_match	HSPA13	ENST00000285667.3	3986	5	41	70	41	-70	multi-exon	FALSE	canonical	1	309356	junction_4	48688.41559857951	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	28	1443	25.0	-1	True	ACTAAA	-37
PB.7458.3	chr21	-	4153	6	novel_not_in_catalog	HSPA13	novel	3986	5	NA	NA	41	-3	any annotated donor/acceptor	TRUE	canonical	1	783	junction_4	198523.12479104294	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	446	1654	30.0	-1	True	AATAAA	-24
PB.7458.5	chr21	-	3780	4	novel_in_catalog	HSPA13	novel	3986	5	NA	NA	35	-3	no_combination_of_known_junctions	FALSE	canonical	1	2304	junction_1	158715.3224760189	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	34	1281	30.0	-7	True	AATAAA	-24
PB.7458.4	chr21	-	3858	6	novel_not_in_catalog	HSPA13	novel	3986	5	NA	NA	37	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	157979.95466336858	NA	5	1	TRUE	NA	NA	NA	C	coding	471	1416	32	1447	30.0	-5	True	AATAAA	-24
PB.8553.12	chr3	+	6458	31	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	264	1	any annotated donor/acceptor	FALSE	canonical	1	17195	junction_1	64410.01746140804	NA	1	NA	TRUE	NA	NA	NA	C	coding	1422	4269	149	4417	10.0	-7	True	AATAAA	-17
PB.8553.13	chr3	+	6193	30	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	270	1	any annotated donor/acceptor	FALSE	canonical	1	17195	junction_1	74504.26411155138	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	2092	4152	10.0	-1	True	AATAAA	-17
PB.7458.9	chr21	-	3635	5	full-splice_match	HSPA13	ENST00000285667.3	3986	5	52	299	52	-299	multi-exon	FALSE	canonical	1	309356	junction_4	48688.41559857951	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	17	1432	65.0	10	True	NA	NA
PB.9033.6	chr4	+	4905	20	novel_in_catalog	TMEM131L	novel	5017	35	NA	NA	0	-3575	intron_retention	FALSE	canonical	1	123366	junction_6	57566.48670639412	NA	2	NA	TRUE	NA	NA	NA	C	coding	646	1941	53	1993	85.0	-14	True	NA	NA
PB.192.4	chr1	+	2865	3	full-splice_match	PDIK1L	ENST00000374269.1	2566	3	-44	-255	-32	255	multi-exon	FALSE	canonical	1	39904	junction_1	12655.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	129	1154	60.0	-23	True	AATAAA	-8
PB.192.5	chr1	+	4045	3	full-splice_match	PDIK1L	ENST00000374269.1	2566	3	-25	-1454	-13	-43	multi-exon	FALSE	canonical	1	39904	junction_1	12655.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	341	1026	110	1135	25.0	-4	True	TATAAA	-17
PB.192.2	chr1	+	4264	3	full-splice_match	PDIK1L	ENST00000619836.4	4252	3	-8	-4	-8	4	multi-exon	FALSE	canonical	1	9653	junction_1	27781.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	341	1026	282	1307	65.0	-8	True	AATAAA	-14
PB.192.3	chr1	+	3829	2	novel_in_catalog	PDIK1L	novel	4252	3	NA	NA	-53	3	no_combination_of_known_junctions	FALSE	canonical	1	2989	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	100	873	70.0	-44	False	AATAAA	-13
PB.192.1	chr1	+	4555	4	novel_in_catalog	PDIK1L	novel	4252	3	NA	NA	-112	0	no_combination_of_known_junctions	FALSE	canonical	1	1474	junction_1	28762.616041583486	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	577	1602	80.0	-775	False	AATAAA	-10
PB.4514.1	chr16	+	2116	16	incomplete-splice_match	UTP4	ENST00000314423.11	2322	17	85	1756	4	-577	3prime_fragment	FALSE	canonical	1	308438	junction_1	180248.83690787022	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2022	93	2114	30.0	-49	True	AATAAA	-18
PB.4514.3	chr16	+	1948	15	novel_not_in_catalog	UTP4	novel	581	5	NA	NA	7	1	any annotated donor/acceptor	FALSE	canonical	1	2454	junction_6	288812.5189609187	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	73	1863	35.0	-29	True	AATAAA	-17
PB.4514.2	chr16	+	2174	17	full-splice_match	UTP4	ENST00000562237.5	2186	17	17	-5	0	4	multi-exon	FALSE	canonical	1	67459	junction_1	211075.87879161452	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	275	2086	30.0	-36	True	AATAAA	-20
PB.4514.5	chr16	+	2082	17	novel_not_in_catalog	UTP4	novel	581	5	NA	NA	-12	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	233291.44360206096	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	59	1996	35.0	-15	True	AATAAA	-18
PB.4514.4	chr16	+	2208	17	full-splice_match	UTP4	ENST00000314423.11	2322	17	118	-4	-13	4	multi-exon	FALSE	canonical	1	308438	junction_1	177249.838139912	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	60	2120	30.0	-16	True	AATAAA	-20
PB.7911.12	chr3	-	2388	2	incomplete-splice_match	OXTR	ENST00000316793.7	4364	4	1144	1637	204	-1637	5prime_fragment	FALSE	canonical	1	128430	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	287	1456	65.0	1139	False	NA	NA
PB.2414.10	chr12	+	3911	24	incomplete-splice_match	NCAPD2	ENST00000539084.5	4290	31	20672	-478	-2588	-1	5prime_fragment	FALSE	canonical	1	373774	junction_13	166945.3173057501	NA	4	NA	TRUE	NA	NA	NA	C	coding	1086	3261	109	3369	25.0	-2597	False	AATAAA	-18
PB.2414.11	chr12	+	3600	24	incomplete-splice_match	NCAPD2	ENST00000539084.5	4290	31	20672	-167	-2588	167	5prime_fragment	FALSE	canonical	1	373774	junction_13	166945.3173057501	NA	2	1	TRUE	NA	NA	NA	C	coding	1086	3261	109	3369	60.0	-2597	False	NA	NA
PB.8079.5	chr3	-	3335	17	novel_in_catalog	SCAP	novel	3749	22	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	17454	junction_14	180427.81096577752	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	542	3202	50.0	-27	False	ATTAAA	-8
PB.8079.4	chr3	-	3405	18	full-splice_match	SCAP	ENST00000320017.10	3430	18	17	8	17	0	multi-exon	FALSE	canonical	1	4361	junction_15	177047.60441924978	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	612	3272	50.0	16	True	ATTAAA	-8
PB.3753.10	chr15	-	3193	7	novel_in_catalog	KATNBL1	novel	2723	10	NA	NA	-5	45	intron_retention	FALSE	canonical	1	12013	junction_1	15696.14463986477	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	149	760	80.0	10	False	NA	NA
PB.8079.1	chr3	-	4110	23	novel_in_catalog	SCAP	novel	3749	22	NA	NA	97	0	combination_of_known_junctions	TRUE	canonical	1	217389	junction_22	126534.1418400518	NA	0	NA	TRUE	NA	NA	NA	C	coding	1278	3837	141	3977	50.0	96	True	ATTAAA	-8
PB.4540.10	chr16	+	2333	9	novel_not_in_catalog	IST1	novel	503	5	NA	NA	10	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	205779.7054301942	NA	2	1	TRUE	NA	NA	NA	C	coding	303	912	86	997	5.0	-17	True	AATAAA	-15
PB.4540.11	chr16	+	2233	8	novel_in_catalog	IST1	novel	503	5	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	3734	junction_7	175270.12659600493	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	86	1030	5.0	-17	True	AATAAA	-13
PB.4540.12	chr16	+	2273	9	full-splice_match	IST1	ENST00000378798.9	2255	9	-21	3	1	3	multi-exon	FALSE	canonical	1	34560	junction_7	161351.92062959578	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	74	1081	5.0	-5	True	AATAAA	-16
PB.8555.11	chr3	-	2078	7	novel_not_in_catalog	ABCC5	novel	5921	30	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	4067	junction_1	96209.39480936014	NA	10	1	TRUE	NA	NA	NA	C	coding	208	627	123	749	25.0	-13	True	AATAAA	-16
PB.387.6	chr1	-	2601	9	novel_in_catalog	LRRC41	novel	892	7	NA	NA	78	0	intron_retention	FALSE	canonical	1	7963	junction_4	278270.76796168217	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2103	35	2137	20.0	1	True	AATAAA	-16
PB.470.12	chr1	+	6340	12	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	10	15	intron_retention	FALSE	canonical	1	358272	junction_2	563359.619357002	NA	3	NA	TRUE	NA	NA	NA	C	coding	293	882	4248	5129	35.0	0	True	AATAAA	-29
PB.9263.5	chr5	+	2531	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	20	-440	intron_retention	FALSE	canonical	1	29076	junction_1	118282.45771241735	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	288	2462	60.0	-90	False	AATAAA	-39
PB.9033.9	chr4	+	4978	35	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	15259	junction_33	106336.94102079907	NA	5	NA	TRUE	NA	NA	NA	C	coding	1597	4794	53	4846	15.0	-14	True	AATAAA	-11
PB.387.2	chr1	-	3194	10	full-splice_match	LRRC41	ENST00000343304.10	2947	10	-248	1	-6	-1	multi-exon	FALSE	canonical	1	283664	junction_9	179632.6196128856	NA	1	NA	TRUE	NA	NA	NA	C	coding	812	2439	293	2731	20.0	-7	True	AATAAA	-15
PB.387.3	chr1	-	2666	9	novel_not_in_catalog	LRRC41	novel	892	7	NA	NA	33	4	intron_retention	FALSE	non_canonical	0	0	junction_8	265691.47921082145	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	12	2198	15.0	15	True	AATAAA	-20
PB.470.15	chr1	+	4861	11	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-12	42	intron_retention	FALSE	canonical	1	358272	junction_2	562695.7471749808	NA	2	NA	TRUE	NA	NA	NA	C	coding	206	618	4244	4861	65.0	4	True	NA	NA
PB.387.1	chr1	-	3699	10	novel_not_in_catalog	LRRC41	novel	892	7	NA	NA	1206	-2	intron_retention	FALSE	canonical	1	1847	junction_9	251145.7029386392	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	190	2298	20.0	1550	False	NA	NA
PB.470.19	chr1	+	926	6	incomplete-splice_match	SRSF11	ENST00000395136.6	1408	11	32	12841	32	1	3prime_fragment	FALSE	canonical	1	634180	junction_2	214636.7867981628	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	717	210	926	40.0	-9285	False	NA	NA
PB.10220.4	chr6	+	2971	19	full-splice_match	EYA4	ENST00000525849.6	2767	19	-219	15	-6	-8	multi-exon	FALSE	canonical	1	23365	junction_18	9826.730343655187	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	404	2254	95.0	-203	False	NA	NA
PB.387.8	chr1	-	2851	10	novel_not_in_catalog	LRRC41	novel	892	7	NA	NA	-13	-5	intron_retention	FALSE	canonical	1	371	junction_9	251548.81841125546	NA	4	NA	TRUE	NA	NA	NA	C	coding	787	2364	32	2395	30.0	320	False	AATAAA	-8
PB.7911.18	chr3	-	2164	4	novel_not_in_catalog	OXTR	novel	4364	4	NA	NA	-89	-1892	any annotated donor/acceptor	FALSE	canonical	1	826	junction_3	52100.41708726204	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	318	1487	40.0	846	False	NA	NA
PB.1513.1	chr10	+	2112	9	novel_in_catalog	SHLD2	novel	969	3	NA	NA	-33	0	no_combination_of_known_junctions	FALSE	canonical	1	4692	junction_2	46318.66439136604	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	487	1332	25.0	-43	False	AATAAA	-15
PB.1513.3	chr10	+	3736	11	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	129	junction_3	49465.839236790474	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2886	71	2956	25.0	-21	True	AATAAA	-15
PB.1513.2	chr10	+	3703	10	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	-20	0	any annotated donor/acceptor	FALSE	canonical	1	5167	junction_2	47325.5275459891	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	416	2923	25.0	-30	True	AATAAA	-15
PB.1513.5	chr10	+	3615	10	full-splice_match	SHLD2	ENST00000298786.4	3614	10	-5	4	-5	1	multi-exon	FALSE	canonical	1	41170	junction_4	35085.051207347875	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	120	2834	20.0	-15	True	AATAAA	-16
PB.1513.4	chr10	+	2995	10	full-splice_match	SHLD2	ENST00000298786.4	3614	10	-11	630	-11	-625	multi-exon	FALSE	canonical	1	41170	junction_4	35085.051207347875	NA	1	NA	TRUE	NA	NA	NA	C	coding	904	2715	126	2840	35.0	-21	True	ATTAAA	-11
PB.1513.7	chr10	+	3810	12	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	52828.29460080792	NA	6	NA	TRUE	NA	NA	NA	C	coding	935	2808	223	3030	25.0	-10	True	AATAAA	-15
PB.1513.6	chr10	+	2567	10	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	11262	junction_3	42823.54464659325	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	120	1787	25.0	-15	True	AATAAA	-15
PB.1513.9	chr10	+	3657	11	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1052	junction_3	49907.36932197488	NA	1	NA	TRUE	NA	NA	NA	C	coding	904	2715	163	2877	25.0	-10	True	AATAAA	-15
PB.1513.8	chr10	+	3558	10	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	8139	junction_7	42492.1490317133	NA	1	1	TRUE	NA	NA	NA	C	coding	887	2664	115	2778	25.0	-10	True	AATAAA	-15
PB.7994.6	chr3	+	3586	15	incomplete-splice_match	STT3B	ENST00000295770.3	4248	16	43605	140	-20411	-140	5prime_fragment	FALSE	canonical	1	706994	junction_3	367040.6073020993	NA	2	NA	TRUE	NA	NA	NA	C	coding	680	2043	126	2168	45.0	NA	False	AATAAA	-15
PB.8482.10	chr3	-	2946	6	full-splice_match	SLC33A1	ENST00000643144.1	3749	6	-35	838	5	24	multi-exon	FALSE	canonical	1	192471	junction_5	35322.58717817821	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	445	2094	60.0	14	False	NA	NA
PB.9662.4	chr5	+	3803	6	novel_in_catalog	ZNF354B	novel	2802	5	NA	NA	12	20	intron_retention	FALSE	canonical	1	22974	junction_5	32282.54848428172	NA	3	1	TRUE	NA	NA	NA	C	coding	612	1839	1084	2922	30.0	-35	True	NA	NA
PB.6156.8	chr19	-	1954	12	full-splice_match	VRK3	ENST00000593919.5	1979	12	5	20	2	-20	multi-exon	FALSE	canonical	1	91577	junction_11	89120.21275300288	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	87	1307	100.0	1	True	NA	NA
PB.884.4	chr1	+	3027	15	novel_not_in_catalog	ATF6	novel	7496	16	NA	NA	49	28307	any annotated donor/acceptor	FALSE	canonical	1	6423	junction_14	123530.64263295656	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	19	1740	60.0	2	True	AATAAA	-18
PB.884.5	chr1	+	3570	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	-21	3947	-21	-3947	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	3	NA	TRUE	NA	NA	NA	C	coding	670	2013	89	2101	15.0	-83	False	AAAAAG	-20
PB.884.2	chr1	+	2461	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	26	5009	26	-5009	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	42	2054	30.0	0	True	CATAAA	-20
PB.12325.2	chrX	+	1724	3	full-splice_match	MAGEA1	ENST00000356661.6	1710	3	-15	1	-15	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	235	1164	10.0	8	True	AATAAA	-16
PB.12325.1	chrX	+	1827	2	incomplete-splice_match	MAGEA1	ENST00000356661.6	1710	3	-37	-5	-37	5	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	332	1261	10.0	-55	False	AATAAA	-22
PB.7738.1	chr22	-	2636	1	incomplete-splice_match	RBFOX2	ENST00000405409.6	6932	12	99215	1	7260	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	2856	False	AATAAA	-14
PB.6156.1	chr19	-	1850	15	full-splice_match	VRK3	ENST00000599538.5	2126	15	571	-295	-3	2	multi-exon	FALSE	canonical	1	91577	junction_14	81586.59863667586	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	95	1519	25.0	-7	True	AATAAA	-17
PB.10220.7	chr6	+	2668	19	novel_not_in_catalog	EYA4	novel	2411	19	NA	NA	1	-2540	any annotated donor/acceptor	FALSE	canonical	1	1428	junction_18	13383.475614874884	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	458	2269	20.0	1	True	AATAAA	-16
PB.6156.3	chr19	-	1928	15	full-splice_match	VRK3	ENST00000316763.7	1938	15	7	3	7	-3	multi-exon	FALSE	canonical	1	55707	junction_14	88271.34024490992	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	178	1602	25.0	-11	True	AATAAA	-12
PB.6156.2	chr19	-	4140	14	full-splice_match	VRK3	ENST00000594948.5	1847	14	-2	-2291	-1	-2	multi-exon	FALSE	canonical	1	91577	junction_13	84595.9332897959	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	91	1515	25.0	-3	True	AATAAA	-13
PB.6156.5	chr19	-	1587	15	full-splice_match	VRK3	ENST00000599538.5	2126	15	540	-1	-4	1	multi-exon	FALSE	canonical	1	91577	junction_14	81586.59863667586	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	126	1550	75.0	706	False	NA	NA
PB.6156.4	chr19	-	1828	14	novel_in_catalog	VRK3	novel	1938	15	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	1	25126	junction_8	115968.73234402147	NA	2	1	TRUE	NA	NA	NA	C	coding	284	855	146	1000	30.0	765	False	AATAAA	-11
PB.6156.7	chr19	-	1877	13	full-splice_match	VRK3	ENST00000594092.5	1831	13	-52	6	7	-6	multi-exon	FALSE	canonical	1	55707	junction_12	111371.83790906504	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	178	1416	15.0	-11	True	AATAAA	-13
PB.6156.6	chr19	-	1795	13	novel_in_catalog	VRK3	novel	1938	15	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	81227	junction_1	105527.72272050784	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	91	1329	25.0	-3	True	AATAAA	-18
PB.4526.8	chr16	-	3506	22	novel_not_in_catalog	AARS	novel	3477	21	NA	NA	-2	-93	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	493531.98189953	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	1374	3173	25.0	-19	True	AATAAA	-19
PB.4526.2	chr16	-	3350	21	full-splice_match	AARS	ENST00000261772.12	3477	21	35	92	35	-92	multi-exon	FALSE	canonical	1	1000537	junction_14	285234.7965635504	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	110	3016	25.0	-3	True	AATAAA	-20
PB.4526.3	chr16	-	3200	20	novel_in_catalog	AARS	novel	3477	21	NA	NA	0	-92	combination_of_known_junctions	FALSE	canonical	1	21107	junction_6	424700.7411894584	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	145	2349	25.0	-17	True	AATAAA	-20
PB.4526.1	chr16	-	3383	21	novel_not_in_catalog	AARS	novel	3477	21	NA	NA	-12	3	any annotated donor/acceptor	FALSE	canonical	1	4794	junction_20	413715.39531130274	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	48	2954	10.0	-29	True	AATAAA	-21
PB.4526.4	chr16	-	3475	22	novel_not_in_catalog	AARS	novel	3477	21	NA	NA	8	-87	any annotated donor/acceptor	FALSE	canonical	1	11921	junction_4	483379.66989752045	NA	1	NA	TRUE	NA	NA	NA	C	coding	999	3000	137	3136	15.0	-9	True	AATAAA	-25
PB.4526.5	chr16	-	3169	20	novel_in_catalog	AARS	novel	3477	21	NA	NA	37	-92	no_combination_of_known_junctions	FALSE	canonical	1	12073	junction_9	426405.0023997415	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	108	1673	25.0	-1	True	AATAAA	-20
PB.6476.43	chr2	-	2409	8	incomplete-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-78	32546	-72	-12895	3prime_fragment	FALSE	canonical	1	357015	junction_5	47146.24218885967	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	402	1814	70.0	-13	True	AATACA	-42
PB.6476.42	chr2	-	2018	11	incomplete-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-106	25321	-100	-5670	3prime_fragment	FALSE	canonical	1	188789	junction_2	84723.7137659227	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1587	430	2016	60.0	10	True	NA	NA
PB.6476.41	chr2	-	2326	12	incomplete-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-6	19658	0	-7	3prime_fragment	FALSE	canonical	1	188789	junction_3	81163.40716894977	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	330	2213	45.0	-11	True	AATAAA	-11
PB.8926.1	chr4	+	430	5	full-splice_match	RPL34	ENST00000394667.7	441	5	11	0	8	0	multi-exon	FALSE	canonical	1	801432	junction_1	3094772.964780807	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	34	387	15.0	0	True	AATAAA	-43
PB.6476.46	chr2	-	1625	1	novel_in_catalog	PPP4R3B	novel	2981	3	NA	NA	-169	-1983	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	1067	False	AATAAA	-13
PB.6476.45	chr2	-	2659	2	incomplete-splice_match	PPP4R3B	ENST00000612688.1	2981	3	-24	1983	-24	-1983	3prime_fragment	FALSE	canonical	1	6188	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-54	True	AATAAA	-13
PB.6476.44	chr2	-	2169	2	incomplete-splice_match	PPP4R3B	ENST00000612688.1	2981	3	1082	-183	-184	183	5prime_fragment	FALSE	canonical	1	463090	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	3	12	288	299	30.0	1052	False	ATTAAA	-25
PB.1058.8	chr1	-	3132	14	full-splice_match	RBBP5	ENST00000264515.10	4404	14	38	1234	-11	-1234	multi-exon	FALSE	canonical	1	104963	junction_1	52188.404912524486	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	105	1721	55.0	-3	True	NA	NA
PB.397.1	chr1	+	1427	3	full-splice_match	CDKN2C	ENST00000396148.1	2086	3	659	0	-590	0	multi-exon	FALSE	canonical	1	300096	junction_1	200541.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	690	1064	25.0	-8534	False	ATTAAA	-17
PB.8005.14	chr3	-	3535	28	novel_not_in_catalog	CLASP2	novel	6978	39	NA	NA	-43	2406	any annotated donor/acceptor	FALSE	canonical	1	254	junction_1	84157.42943150367	NA	2	2	TRUE	NA	NA	NA	C	coding	1008	3027	255	3281	25.0	-17	True	AATAAA	-19
PB.397.3	chr1	+	4389	1	novel_in_catalog	CDKN2C	novel	2904	4	NA	NA	301	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	124	375	3652	4026	25.0	-9	True	ATTAAA	-17
PB.397.2	chr1	+	5650	1	genic	CDKN2C	novel	NA	NA	NA	NA	291	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	124	375	4911	5285	20.0	3	True	ATTAAA	-19
PB.6807.3	chr2	+	1539	12	full-splice_match	PSMD14	ENST00000409682.7	1954	12	413	2	-10	0	multi-exon	FALSE	canonical	1	719768	junction_1	280003.30558187497	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	292	1224	15.0	-24	True	AATAAA	-15
PB.8005.15	chr3	-	5010	27	novel_in_catalog	CLASP2	novel	6978	39	NA	NA	-30	962	no_combination_of_known_junctions	FALSE	canonical	1	36142	junction_1	80591.15403448115	NA	5	1	TRUE	NA	NA	NA	C	coding	1061	3186	242	3427	70.0	-4	True	NA	NA
PB.763.8	chr1	+	2884	5	novel_in_catalog	CHTOP	novel	1840	4	NA	NA	-6	0	intron_retention	FALSE	canonical	1	424822	junction_2	121274.11574713707	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	2009	2683	5.0	-11	True	NA	NA
PB.3212.3	chr13	+	4376	8	full-splice_match	NDFIP2	ENST00000218652.11	4625	8	244	5	-57	0	multi-exon	FALSE	canonical	1	473534	junction_4	39497.09816000695	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	91	819	40.0	0	True	AATAAA	-19
PB.3212.2	chr13	+	2391	8	full-splice_match	NDFIP2	ENST00000620924.1	2324	8	-75	8	-54	-8	multi-exon	FALSE	canonical	1	473534	junction_4	39497.09816000695	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	88	816	15.0	3	True	AATAAA	-19
PB.3212.5	chr13	+	2239	8	full-splice_match	NDFIP2	ENST00000620924.1	2324	8	-214	299	-46	-299	multi-exon	FALSE	canonical	1	473534	junction_4	39497.09816000695	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	227	955	15.0	5	True	CATAAA	-27
PB.3212.4	chr13	+	4207	8	full-splice_match	NDFIP2	ENST00000218652.11	4625	8	194	224	40	-176	multi-exon	FALSE	canonical	1	473534	junction_4	39497.09816000695	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	141	869	20.0	-851	False	AATAAA	-23
PB.3212.7	chr13	+	2382	8	novel_not_in_catalog	NDFIP2	novel	4648	8	NA	NA	73	-13	any annotated donor/acceptor	FALSE	canonical	1	8167	junction_7	227988.73459942028	NA	1	1	TRUE	NA	NA	NA	C	coding	259	780	108	887	25.0	-17	True	AATAAA	-14
PB.3212.6	chr13	+	1902	8	full-splice_match	NDFIP2	ENST00000620924.1	2324	8	-87	509	-66	392	multi-exon	FALSE	canonical	1	473534	junction_4	39497.09816000695	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	100	828	20.0	-9	True	AATAAA	-13
PB.4150.5	chr16	+	3666	20	novel_in_catalog	TELO2	novel	1667	12	NA	NA	184	-6	intron_retention	FALSE	canonical	1	52053	junction_16	80736.60515216035	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	96	1331	25.0	-11	True	AATAAA	-12
PB.4150.4	chr16	+	3583	21	novel_not_in_catalog	TELO2	novel	1667	12	NA	NA	180	-2	any annotated donor/acceptor	FALSE	canonical	1	11460	junction_10	100355.93032625178	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	100	1539	15.0	-15	True	AATAAA	-16
PB.4150.7	chr16	+	3735	20	novel_in_catalog	TELO2	novel	1667	12	NA	NA	196	-5	intron_retention	FALSE	canonical	1	176386	junction_1	55311.672344854	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	84	2213	25.0	1	True	AATAAA	-13
PB.4150.6	chr16	+	3664	22	novel_not_in_catalog	TELO2	novel	1667	12	NA	NA	192	-1	any annotated donor/acceptor	FALSE	canonical	1	733	junction_1	114661.18334866468	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	163	2319	15.0	-3	True	AATAAA	-17
PB.4150.1	chr16	+	3299	21	novel_in_catalog	TELO2	novel	1667	12	NA	NA	-3	-2	combination_of_known_junctions	TRUE	canonical	1	29215	junction_1	79134.49909127814	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	267	2780	15.0	-19	True	AATAAA	-16
PB.10220.1	chr6	+	3022	18	novel_in_catalog	EYA4	novel	2411	19	NA	NA	-65	-8	combination_of_known_junctions	TRUE	canonical	1	18857	junction_9	13445.248315407782	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	530	2305	95.0	-329	False	NA	NA
PB.4150.3	chr16	+	3108	21	full-splice_match	TELO2	ENST00000262319.10	3314	21	205	1	205	-1	multi-exon	FALSE	canonical	1	176386	junction_1	56943.102019823265	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	75	2588	15.0	10	True	AATAAA	-17
PB.4150.2	chr16	+	3594	21	novel_in_catalog	TELO2	novel	1667	12	NA	NA	186	-2	combination_of_known_junctions	FALSE	canonical	1	52053	junction_17	78819.04613370742	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	94	2250	15.0	-9	True	AATAAA	-16
PB.12206.3	chrX	+	4440	4	incomplete-splice_match	IL1RAPL2	ENST00000344799.5	1290	5	23082	-3183	-201	3015	5prime_fragment	FALSE	canonical	1	1848	junction_1	400.5698718353918	NA	0	NA	TRUE	NA	NA	NA	B	coding	304	915	343	1257	40.0	NA	False	AATAAA	-21
PB.12206.2	chrX	+	3324	4	incomplete-splice_match	IL1RAPL2	ENST00000344799.5	1290	5	23082	-2067	-201	1899	5prime_fragment	FALSE	canonical	1	1848	junction_1	400.5698718353918	NA	0	NA	TRUE	NA	NA	NA	B	coding	304	915	343	1257	20.0	NA	False	ATTAAA	-17
PB.12206.1	chrX	+	3669	6	novel_not_in_catalog	IL1RAPL2	novel	2985	11	NA	NA	-526	1899	any annotated donor/acceptor	FALSE	canonical	1	13	junction_1	1203.934616164848	NA	3	NA	TRUE	NA	NA	NA	B	coding	304	915	688	1602	20.0	NA	False	ATTAAA	-17
PB.4150.8	chr16	+	3500	20	novel_in_catalog	TELO2	novel	1667	12	NA	NA	201	-1	no_combination_of_known_junctions	FALSE	canonical	1	28877	junction_9	100195.78925193002	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	79	1455	15.0	6	True	AATAAA	-17
PB.12206.4	chrX	+	3023	4	incomplete-splice_match	IL1RAPL2	ENST00000344799.5	1290	5	23093	-1777	-190	1609	5prime_fragment	FALSE	canonical	1	1848	junction_1	400.5698718353918	NA	0	NA	TRUE	NA	NA	NA	B	coding	304	915	332	1246	30.0	NA	False	AATGAA	-16
PB.849.22	chr1	-	2092	4	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	11	2088	intron_retention	FALSE	canonical	1	49053	junction_3	250748.6263456337	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	885	1208	2092	40.0	-15	True	NA	NA
PB.849.23	chr1	-	2408	3	incomplete-splice_match	DCAF8	ENST00000475733.5	1426	4	-29	-3	11	3	intron_retention	FALSE	canonical	1	359602	junction_2	144228.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	1208	2029	20.0	-15	True	NA	NA
PB.849.20	chr1	-	6701	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	6	-109	intron_retention	FALSE	canonical	1	74463	junction_12	239562.45025758244	NA	5	NA	TRUE	NA	NA	NA	C	coding	485	1458	296	1753	35.0	-20	True	AATAAA	-14
PB.8005.13	chr3	-	5817	27	novel_in_catalog	CLASP2	novel	6978	39	NA	NA	-30	9549	no_combination_of_known_junctions	FALSE	canonical	1	50311	junction_19	72390.73355878495	NA	3	1	TRUE	NA	NA	NA	C	coding	1046	3141	242	3382	100.0	-4	True	NA	NA
PB.4140.2	chr16	+	1836	4	novel_in_catalog	HAGHL	novel	1820	6	NA	NA	-7	0	intron_retention	FALSE	canonical	1	172155	junction_2	32252.744699740928	NA	1	1	TRUE	NA	NA	NA	B	coding	179	540	256	795	15.0	-1259	False	AATAAA	-14
PB.4140.3	chr16	+	2264	2	incomplete-splice_match	HAGHL	ENST00000569385.1	440	3	-1308	-403	2	1	intron_retention	FALSE	canonical	1	240964	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	1896	2249	15.0	-1250	False	AATAAA	-15
PB.849.24	chr1	-	1796	1	novel_in_catalog	AL139011.2	novel	2587	16	NA	NA	17611	-20590	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.4140.1	chr16	+	1289	9	novel_in_catalog	HAGHL	novel	1820	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	1	16849	junction_1	75676.32134954764	NA	0	NA	TRUE	NA	NA	NA	B	coding	282	849	182	1030	15.0	-1456	False	AATAAA	-14
PB.9522.1	chr5	+	3890	1	full-splice_match	PCDHGA2	ENST00000528330.2	4543	1	33	620	33	-620	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	823	2472	180	2651	30.0	-5082	False	AATAAA	-20
PB.9914.4	chr6	+	2310	6	full-splice_match	HLA-DPB1	ENST00000418931.6	1560	6	40	-790	40	790	multi-exon	FALSE	canonical	1	1215308	junction_2	721760.857794713	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	80	853	20.0	-25	True	TATAAA	-15
PB.9914.5	chr6	+	1081	6	full-splice_match	HLA-DPB1	ENST00000418931.6	1560	6	51	428	-33	-428	multi-exon	FALSE	canonical	1	1215308	junction_2	721760.857794713	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	69	842	20.0	-14	True	NA	NA
PB.9914.2	chr6	+	2818	1	novel_in_catalog	HLA-DPB1	novel	1560	6	NA	NA	23	-2466	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-9912	False	ATTAAA	-16
PB.2377.6	chr11	-	8701	34	novel_in_catalog	NCAPD3	novel	1226	2	NA	NA	7	-7	intron_retention	FALSE	canonical	1	184389	junction_32	83442.90627551462	NA	3	NA	TRUE	NA	NA	NA	C	coding	1419	4260	59	4318	35.0	-18	True	AATAAA	-11
PB.9914.1	chr6	+	3313	6	full-splice_match	HLA-DPB1	ENST00000418931.6	1560	6	-2151	398	-2151	-398	multi-exon	FALSE	canonical	1	1215308	junction_2	721760.857794713	NA	5	NA	TRUE	NA	NA	NA	C	coding	257	774	2271	3044	30.0	-6685	False	TTTAAA	-11
PB.8587.12	chr3	+	2699	11	incomplete-splice_match	EIF4A2	ENST00000425053.5	1977	12	-1	-13	1	0	intron_retention	FALSE	canonical	1	1087110	junction_10	837268.6085513358	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	36	1124	20.0	-1	True	AATAAA	-16
PB.11841.10	chr9	+	2778	2	incomplete-splice_match	PTPA	ENST00000432651.5	857	3	75	2838	4	1514	3prime_fragment	FALSE	canonical	1	49960	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	55	510	60.0	4	True	NA	NA
PB.7088.8	chr2	+	3408	15	novel_in_catalog	MLPH	novel	744	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	76261	junction_10	190958.9641128856	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	212	1711	25.0	0	True	AAAAAG	-20
PB.6370.9	chr2	-	1914	10	novel_not_in_catalog	PREB	novel	3057	6	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	2443	junction_9	237681.1291794113	NA	1	NA	TRUE	NA	NA	NA	B	coding	398	1197	70	1266	30.0	-25	True	AATAAA	-19
PB.6370.8	chr2	-	1973	8	novel_in_catalog	PREB	novel	3057	6	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	1	26781	junction_1	257313.63604165948	NA	0	NA	TRUE	NA	NA	NA	B	coding	350	1053	226	1278	25.0	-24	True	AATAAA	-25
PB.6370.6	chr2	-	2317	8	novel_in_catalog	PREB	novel	3057	6	NA	NA	0	-4	intron_retention	FALSE	canonical	1	579636	junction_2	98039.0729999722	NA	0	NA	TRUE	NA	NA	NA	B	coding	137	414	216	629	25.0	-14	True	AATAAA	-25
PB.6370.5	chr2	-	1943	8	novel_in_catalog	PREB	novel	3057	6	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	4437	junction_7	268301.0733128295	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-23	True	AATAAA	-26
PB.6370.4	chr2	-	2234	10	novel_not_in_catalog	PREB	novel	3057	6	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	819	junction_8	307502.2990189677	NA	9	2	TRUE	NA	NA	NA	B	coding	345	1038	542	1579	25.0	4788	False	AATAAA	-26
PB.6370.2	chr2	-	2892	7	incomplete-splice_match	PREB	ENST00000260643.6	2166	9	30	3	-9	-3	intron_retention	FALSE	canonical	1	579636	junction_2	93104.00448363587	NA	1	NA	TRUE	NA	NA	NA	B	coding	109	330	225	554	25.0	-23	True	AATAAA	-26
PB.6370.1	chr2	-	2075	9	novel_not_in_catalog	PREB	novel	3057	6	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	4903	junction_4	251008.70560600085	NA	1	NA	TRUE	NA	NA	NA	B	coding	284	855	211	1065	10.0	-9	True	AATAAA	-29
PB.10616.8	chr7	+	2647	10	novel_not_in_catalog	TRIM73	novel	1321	7	NA	NA	8733	5790	intron_retention	TRUE	canonical	1	689	junction_5	113449.63554071468	NA	0	NA	TRUE	NA	NA	NA	B	coding	280	843	1619	2461	30.0	-10	False	AATAAA	-17
PB.10616.9	chr7	+	2418	10	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8733	5795	intron_retention	FALSE	canonical	1	1162	junction_1	107440.64443217008	NA	5	NA	TRUE	NA	NA	NA	B	coding	200	603	1625	2227	25.0	-10	False	AATAAA	-22
PB.11614.10	chr9	+	2544	15	full-splice_match	CEP78	ENST00000277082.9	2542	15	3	-5	3	-3	multi-exon	FALSE	canonical	1	89710	junction_1	34214.556705160045	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	117	2234	35.0	154	False	AATAAA	-22
PB.9662.1	chr5	+	2261	5	full-splice_match	ZNF354B	ENST00000322434.7	2802	5	-51	592	-51	-592	multi-exon	FALSE	canonical	1	33883	junction_1	28292.665074184864	NA	2	NA	TRUE	NA	NA	NA	C	coding	612	1839	278	2116	20.0	-215	False	AATAAA	-35
PB.10616.2	chr7	+	4745	6	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8715	5792	intron_retention	FALSE	canonical	1	1162	junction_1	121178.92736379539	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	4023	4376	30.0	-28	False	AATAAA	-19
PB.10616.3	chr7	+	4661	7	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8722	5795	intron_retention	FALSE	canonical	1	1162	junction_1	123323.01090417888	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	3936	4289	25.0	-21	False	AATAAA	-22
PB.10616.1	chr7	+	1952	6	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8707	6451	intron_retention	FALSE	canonical	1	37646	junction_1	87618.46876315518	NA	1	NA	TRUE	NA	NA	NA	B	coding	163	492	433	924	30.0	-36	False	AATAAA	-20
PB.7387.2	chr20	-	377	3	full-splice_match	ATP5F1E	ENST00000243997.7	3665	3	69	3219	-21	-8	multi-exon	FALSE	canonical	1	4241938	junction_2	1210540.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	21	True	AATAAA	-21
PB.10616.7	chr7	+	2642	10	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8733	5790	intron_retention	FALSE	canonical	1	1162	junction_1	110077.69049321933	NA	1	1	TRUE	NA	NA	NA	B	coding	163	492	1784	2275	30.0	-10	False	AATAAA	-17
PB.10616.4	chr7	+	4530	7	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8723	5795	intron_retention	FALSE	canonical	1	1162	junction_1	114364.07808605034	NA	0	NA	TRUE	NA	NA	NA	B	coding	163	492	3667	4158	25.0	-20	False	AATAAA	-22
PB.7387.1	chr20	-	3577	3	full-splice_match	ATP5F1E	ENST00000243997.7	3665	3	79	9	-11	-9	multi-exon	FALSE	canonical	1	4241938	junction_2	1210540.0	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	31	True	AATAAA	-15
PB.7668.44	chr22	-	1878	8	incomplete-splice_match	HPS4	ENST00000398145.6	4497	14	39	16440	10	-2399	3prime_fragment	FALSE	canonical	1	56075	junction_7	65188.59651998115	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	579	1256	85.0	9	True	NA	NA
PB.7668.42	chr22	-	2790	14	full-splice_match	HPS4	ENST00000336873.9	3786	14	-33	1029	0	0	multi-exon	FALSE	canonical	1	46171	junction_13	85121.98962046615	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	543	2669	20.0	23	False	AAAACA	-24
PB.7668.41	chr22	-	2846	15	novel_in_catalog	HPS4	novel	471	4	NA	NA	-1	17	combination_of_known_junctions	FALSE	canonical	1	21377	junction_6	96313.7581040344	NA	4	1	TRUE	NA	NA	NA	C	coding	726	2181	528	2708	20.0	-31	True	AAAACA	-41
PB.7668.40	chr22	-	3762	13	novel_in_catalog	HPS4	novel	471	4	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	1	10446	junction_11	99757.76012710184	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	1303	2634	25.0	-11	True	AATAAA	-14
PB.7004.6	chr2	-	2310	11	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	4500	junction_5	574835.5128117608	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	632	1036	30.0	-31	False	AATAAA	-18
PB.6363.16	chr2	-	2643	20	novel_not_in_catalog	HADHA	novel	3037	20	NA	NA	-4	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	443574.56730614195	NA	2	NA	TRUE	NA	NA	NA	C	coding	743	2232	35	2266	10.0	-21	True	AATAAA	-17
PB.6363.15	chr2	-	2784	20	novel_not_in_catalog	HADHA	novel	3037	20	NA	NA	-4	8	any annotated donor/acceptor	FALSE	canonical	1	6363	junction_6	442602.37090622506	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	35	2407	10.0	-21	True	AATAAA	-17
PB.7004.5	chr2	-	2300	12	full-splice_match	TMBIM1	ENST00000258412.7	2371	12	62	9	-2	0	multi-exon	FALSE	canonical	1	523090	junction_10	408659.2973155385	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	91	1026	30.0	-13	True	AATAAA	-18
PB.6363.13	chr2	-	2572	19	novel_in_catalog	HADHA	novel	3037	20	NA	NA	-6	10	no_combination_of_known_junctions	FALSE	canonical	1	1828	junction_8	454357.0189797214	NA	7	NA	TRUE	NA	NA	NA	C	coding	718	2157	37	2193	5.0	62	False	AATAAA	-19
PB.6363.12	chr2	-	2825	21	full-splice_match	HADHA	ENST00000643063.1	2748	21	-26	-51	-4	10	multi-exon	FALSE	canonical	1	3814	junction_10	476110.89168934943	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	1148	2446	5.0	-21	True	AATAAA	-19
PB.3218.88	chr13	-	1672	6	incomplete-splice_match	DCT	ENST00000446125.1	2395	10	0	20436	0	2096	3prime_fragment	FALSE	canonical	1	137731	junction_4	49212.56499472467	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	428	1633	25.0	-1	True	NA	NA
PB.3218.89	chr13	-	1745	4	incomplete-splice_match	DCT	ENST00000446125.1	2395	10	0	25589	0	279	3prime_fragment	FALSE	canonical	1	137731	junction_2	53738.93933328668	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	428	1294	35.0	-1	True	NA	NA
PB.364.1	chr1	+	2076	11	novel_in_catalog	RNF220	novel	3099	15	NA	NA	-11	-1	combination_of_known_junctions	TRUE	canonical	1	171017	junction_1	310887.6437608288	NA	0	NA	TRUE	NA	NA	NA	B	coding	271	816	314	1129	5.0	-11	True	ATTAAA	-15
PB.3218.84	chr13	-	3255	7	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	7677	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	97550.10493701286	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	428	1633	80.0	-1	True	ATTAAA	-17
PB.3218.85	chr13	-	3211	7	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	1	6600	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	97550.10493701286	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	427	1689	35.0	0	True	NA	NA
PB.3218.86	chr13	-	2440	6	incomplete-splice_match	DCT	ENST00000446125.1	2395	10	5	19663	5	2869	3prime_fragment	FALSE	canonical	1	137731	junction_4	49212.56499472467	NA	3	NA	TRUE	NA	NA	NA	C	coding	401	1206	423	1628	35.0	4	True	AGTAAA	-41
PB.3218.87	chr13	-	1897	6	incomplete-splice_match	DCT	ENST00000446125.1	2395	10	-1	20212	-1	2320	3prime_fragment	FALSE	canonical	1	137731	junction_4	49212.56499472467	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	429	1634	25.0	-2	True	NA	NA
PB.3218.80	chr13	-	1689	8	full-splice_match	DCT	ENST00000377028.9	5064	8	365	3010	365	-229	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	50	1609	20.0	1828	False	AATAAA	-18
PB.3218.81	chr13	-	2093	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	91	-228	no_combination_of_known_junctions	FALSE	canonical	1	3411	junction_4	116174.86256480194	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	324	2012	20.0	4	True	AATAAA	-19
PB.3218.82	chr13	-	3298	10	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	1	-230	any annotated donor/acceptor	FALSE	canonical	1	3259	junction_3	113993.63028598475	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	427	1716	20.0	0	True	AATAAA	-17
PB.3218.83	chr13	-	2082	7	incomplete-splice_match	DCT	ENST00000377028.9	5064	8	-13	6354	0	-3573	3prime_fragment	FALSE	canonical	1	137731	junction_5	45113.302033140215	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	428	1816	20.0	-1	True	ATTAAA	-22
PB.100.6	chr1	+	4489	20	novel_in_catalog	MFN2	novel	4531	18	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	44128	junction_3	239161.78983722307	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	272	2545	10.0	-15	True	AATAAA	-18
PB.1190.1	chr1	+	4435	16	full-splice_match	GALNT2	ENST00000366672.4	4454	16	18	1	18	-1	multi-exon	FALSE	canonical	1	463193	junction_3	181909.65861066553	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	55	1770	15.0	-11	True	AATAAA	-20
PB.502.8	chr1	-	2740	14	novel_not_in_catalog	SSX2IP	novel	5843	13	NA	NA	-35	582	any annotated donor/acceptor	FALSE	canonical	1	45395	junction_13	76988.92253500233	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	223	2064	25.0	241	False	AATAAA	-12
PB.1190.7	chr1	+	4033	12	novel_in_catalog	GALNT2	novel	692	7	NA	NA	17	2	intron_retention	FALSE	canonical	1	4892	junction_6	314601.7085841495	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	56	1369	10.0	-12	True	AATAAA	-19
PB.11784.2	chr9	-	2574	3	novel_in_catalog	RPL35	novel	493	5	NA	NA	-4	0	intron_retention	FALSE	canonical	1	8989844	junction_1	292697.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	2127	2540	10.0	-9	True	AATAAA	-16
PB.1190.4	chr1	+	2371	16	full-splice_match	GALNT2	ENST00000366672.4	4454	16	33	2050	-17	-2046	multi-exon	FALSE	canonical	1	463193	junction_3	181909.65861066553	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	40	1755	35.0	4	True	TATAAA	-12
PB.11274.49	chr8	-	3263	14	incomplete-splice_match	PABPC1	ENST00000519004.5	2401	16	-1	352	-1	-166	intron_retention	FALSE	canonical	1	1799488	junction_7	1783819.1420690343	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	506	2416	50.0	-2	True	NA	NA
PB.2980.1	chr12	-	1459	6	full-splice_match	DIABLO	ENST00000464942.7	1471	6	13	-1	0	1	multi-exon	FALSE	canonical	1	561610	junction_4	124606.4664421554	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	26	745	10.0	12	True	NA	NA
PB.2980.2	chr12	-	1360	6	full-splice_match	DIABLO	ENST00000464942.7	1471	6	11	100	-2	-1	multi-exon	FALSE	canonical	1	561610	junction_4	124606.4664421554	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	397	747	0.0	10	True	NA	NA
PB.2980.3	chr12	-	1424	6	novel_not_in_catalog	DIABLO	novel	2257	7	NA	NA	202	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	306739.0095867169	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	462	812	0.0	-1	True	NA	NA
PB.2980.4	chr12	-	1336	6	full-splice_match	DIABLO	ENST00000342392.3	1336	6	-2	2	-2	-2	multi-exon	FALSE	canonical	1	78982	junction_5	338927.9177061695	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	381	731	20.0	-3	True	NA	NA
PB.11752.20	chr9	-	2956	20	incomplete-splice_match	CDK5RAP2	ENST00000360190.8	5985	37	2	69171	2	-18257	3prime_fragment	FALSE	canonical	1	117178	junction_4	41827.223790850156	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	182	2590	20.0	2	True	ATTAAA	-15
PB.502.1	chr1	-	5578	14	full-splice_match	SSX2IP	ENST00000342203.7	5835	14	53	204	-24	-204	multi-exon	FALSE	canonical	1	45395	junction_13	68828.68871610658	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	212	2056	25.0	-32	True	ATTAAA	-22
PB.8714.1	chr4	+	2143	9	full-splice_match	PACRGL	ENST00000503585.5	1582	9	10	-571	4	-1	multi-exon	TRUE	canonical	1	46084	junction_8	52627.22928532339	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	382	1128	15.0	10	True	ATTAAA	-21
PB.6091.1	chr19	-	1900	3	full-splice_match	MYPOP	ENST00000322217.5	1890	3	-11	1	-11	-1	multi-exon	FALSE	canonical	1	28598	junction_2	28211.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	399	1200	99	1298	20.0	-3	True	AATAAA	-19
PB.8818.11	chr4	-	2568	10	full-splice_match	RASSF6	ENST00000395777.6	2735	10	-40	207	-35	-207	multi-exon	FALSE	canonical	1	9426	junction_4	13439.702080949986	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	200	1111	65.0	178	False	AATAGA	-37
PB.502.2	chr1	-	5432	13	full-splice_match	SSX2IP	ENST00000605755.5	1933	13	-41	-3458	-17	-211	multi-exon	FALSE	canonical	1	18548	junction_12	73824.05146472705	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	154	1917	35.0	-25	True	ATTAAA	-15
PB.6517.8	chr2	+	2250	2	novel_not_in_catalog	PNO1	novel	2286	7	NA	NA	-30	3272	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	109	330	49	378	100.0	-1	True	NA	NA
PB.4138.2	chr16	-	2005	9	full-splice_match	JMJD8	ENST00000412368.6	2038	9	30	3	30	-3	multi-exon	FALSE	canonical	1	118660	junction_8	179080.03924502587	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	28	885	20.0	9722	False	AGTAAA	-10
PB.4138.1	chr16	-	1837	8	full-splice_match	JMJD8	ENST00000562824.5	1015	8	30	-852	1	-5	multi-exon	FALSE	canonical	1	21705	junction_7	209176.05291090984	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	15	719	25.0	-2	True	AGTAAA	-8
PB.11637.16	chr9	+	4537	6	novel_not_in_catalog	SPIN1	novel	4484	6	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	1	1251	junction_3	225277.4894315009	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	728	1123	30.0	-10	True	AATAAA	-12
PB.6517.4	chr2	+	3010	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	18	-742	18	742	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	74	832	40.0	2	True	AATATA	-18
PB.6517.5	chr2	+	1910	6	novel_in_catalog	PNO1	novel	2286	7	NA	NA	24	-281	no_combination_of_known_junctions	FALSE	canonical	1	13254	junction_5	187750.05783477137	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	666	68	733	35.0	8	True	NA	NA
PB.10571.10	chr7	-	2000	11	novel_not_in_catalog	GUSB	novel	2300	12	NA	NA	-1	2	any annotated donor/acceptor	FALSE	canonical	1	5460	junction_3	288153.2656497927	NA	4	1	TRUE	NA	NA	NA	C	coding	589	1770	30	1799	35.0	0	True	AATAAA	-40
PB.10571.11	chr7	-	2149	12	novel_not_in_catalog	GUSB	novel	2300	12	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	5460	junction_3	262824.9922928164	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	29	1951	35.0	1	True	AATAAA	-37
PB.6517.1	chr2	+	2248	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	42	-4	-31	4	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	50	808	30.0	-2	True	ATTAAA	-22
PB.6517.2	chr2	+	1649	6	novel_not_in_catalog	PNO1	novel	2286	7	NA	NA	-7	3595	any annotated donor/acceptor	FALSE	canonical	1	13897	junction_5	187509.25812812548	NA	3	NA	TRUE	NA	NA	NA	C	coding	213	642	99	740	30.0	-51	False	NA	NA
PB.6517.3	chr2	+	1263	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	10	1013	10	261	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	82	840	30.0	-6	True	NA	NA
PB.5583.10	chr19	-	3475	1	novel_in_catalog	MKNK2	novel	803	5	NA	NA	896	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	13	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	9956	False	AATAAA	-15
PB.5583.12	chr19	-	3567	13	novel_not_in_catalog	MKNK2	novel	803	5	NA	NA	2773	1	intron_retention	FALSE	canonical	1	15	junction_12	790942.2119851741	NA	3	NA	TRUE	NA	NA	NA	B	coding	418	1257	170	1426	10.0	3162	False	AATAAA	-15
PB.5583.14	chr19	-	3613	13	novel_in_catalog	MKNK2	novel	803	5	NA	NA	1	-173	intron_retention	FALSE	canonical	1	362	junction_12	809898.0793744419	NA	0	NA	TRUE	NA	NA	NA	B	coding	510	1533	123	1655	90.0	-1	True	NA	NA
PB.3034.3	chr12	+	4602	6	novel_in_catalog	ZNF10	novel	546	4	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	19883	junction_2	54500.76085340461	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	388	2109	45.0	-6	True	NA	NA
PB.3034.2	chr12	+	4433	6	novel_in_catalog	ZNF10	novel	546	4	NA	NA	-8	-175	intron_retention	FALSE	canonical	1	19883	junction_2	54500.76085340461	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	390	2111	25.0	-8	True	AATAAA	-17
PB.3034.1	chr12	+	3729	5	full-splice_match	ZNF10	ENST00000426665.6	2169	5	-45	-1515	-6	-982	multi-exon	FALSE	canonical	1	19883	junction_1	50167.86211497855	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	493	2214	20.0	-45	False	AATAAA	-20
PB.2238.32	chr11	-	2421	16	full-splice_match	MTMR2	ENST00000352297.11	3350	16	-18	947	-11	300	multi-exon	FALSE	canonical	1	112648	junction_15	107291.31383597132	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	452	2167	35.0	-12	True	ATTAAA	-15
PB.2238.33	chr11	-	2328	15	full-splice_match	MTMR2	ENST00000346299.9	4681	15	198	2155	-1	299	multi-exon	FALSE	canonical	1	101789	junction_14	97265.74303026525	NA	1	1	TRUE	NA	NA	NA	C	coding	643	1932	144	2075	35.0	9	True	ATTAAA	-14
PB.2238.30	chr11	-	2583	17	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	-4	346	no_combination_of_known_junctions	FALSE	canonical	1	28052	junction_14	140559.83874513584	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	568	2283	30.0	-5	True	ATTAAA	-17
PB.2238.31	chr11	-	2531	17	full-splice_match	MTMR2	ENST00000409459.5	3420	17	-13	902	-2	346	multi-exon	FALSE	canonical	1	56216	junction_13	134962.82741578328	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	516	2231	30.0	-3	True	ATTAAA	-17
PB.12111.1	chrX	-	5165	1	full-splice_match	ZXDA	ENST00000358697.5	4113	1	359	-1411	359	1411	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	799	2400	42	2441	35.0	-640	False	AGTAAA	-15
PB.2238.34	chr11	-	3598	1	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	-1	3979	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	9	True	NA	NA
PB.12111.3	chrX	-	3350	1	full-splice_match	ZXDA	ENST00000358697.5	4113	1	343	420	343	-420	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	799	2400	58	2457	60.0	-656	False	AATAAA	-14
PB.7240.3	chr20	+	2628	11	full-splice_match	CBFA2T2	ENST00000342704.10	2864	11	0	236	0	-236	multi-exon	FALSE	canonical	1	35408	junction_1	34760.780909525034	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	242	1969	25.0	-30	True	AATAAA	-31
PB.6477.20	chr2	-	2560	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	-2	381	no_combination_of_known_junctions	FALSE	canonical	1	8474	junction_26	74290.97654024514	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	201	2312	45.0	-10	True	ATTAAA	-24
PB.6507.3	chr2	-	5251	2	full-splice_match	SERTAD2	ENST00000476805.2	1068	2	88	-4271	-22	-641	multi-exon	FALSE	canonical	1	25661	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	642	1586	95.0	-4	True	AATGAA	-41
PB.7213.18	chr20	+	2414	9	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	297	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	359451.0737289004	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	80	925	15.0	4	False	ATTAAA	-23
PB.6477.21	chr2	-	2481	26	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	2	381	combination_of_known_junctions	FALSE	canonical	1	4237	junction_25	73910.58062334513	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	506	2233	45.0	-6	True	ATTAAA	-24
PB.4411.18	chr16	+	4134	33	novel_in_catalog	PHKB	novel	1032	8	NA	NA	1	252	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	132092.95694497786	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	243	3503	25.0	6	True	AATAAA	-14
PB.7213.12	chr20	+	3965	20	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	16	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	276968.13984930556	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	996	2477	15.0	-14	True	ATTAAA	-22
PB.7213.13	chr20	+	3039	2	incomplete-splice_match	PYGB	ENST00000216962.8	4134	20	16	36076	16	-34530	3prime_fragment	FALSE	canonical	1	657567	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	95	496	65.0	-14	True	NA	NA
PB.7213.10	chr20	+	4217	21	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	16	-3	any annotated donor/acceptor	FALSE	canonical	1	2263	junction_15	336133.0043779396	NA	1	NA	TRUE	NA	NA	NA	C	coding	877	2634	95	2728	15.0	-14	True	ATTAAA	-23
PB.7213.11	chr20	+	3856	20	full-splice_match	PYGB	ENST00000216962.8	4134	20	281	-3	281	3	multi-exon	FALSE	canonical	1	657567	junction_1	182705.11076897246	NA	2	NA	TRUE	NA	NA	NA	C	coding	752	2259	103	2361	20.0	-12	False	ATTAAA	-29
PB.7213.16	chr20	+	2753	17	incomplete-splice_match	PYGB	ENST00000216962.8	4134	20	27	4908	27	-3362	3prime_fragment	FALSE	canonical	1	657567	junction_1	170373.3147115727	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	84	2309	25.0	-3	True	TTTAAA	-21
PB.7213.17	chr20	+	2192	16	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	27	-6822	any annotated donor/acceptor	FALSE	canonical	1	372	junction_15	290428.6871401117	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	84	1937	90.0	-3	True	NA	NA
PB.7213.14	chr20	+	3984	19	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	27	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	285645.96286627697	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	553	2493	15.0	-3	True	ATTAAA	-25
PB.7213.15	chr20	+	3277	12	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	27	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	325850.7846984745	NA	3	1	TRUE	NA	NA	NA	C	coding	452	1359	428	1786	15.0	-3	True	ATTAAA	-25
PB.908.6	chr1	+	5154	7	full-splice_match	RCSD1	ENST00000367854.7	3135	7	154	-2173	-2	2173	multi-exon	FALSE	canonical	1	233895	junction_2	40720.991979635706	NA	5	NA	TRUE	NA	NA	NA	C	coding	416	1251	178	1428	60.0	-14	True	NA	NA
PB.8461.45	chr3	-	2953	6	incomplete-splice_match	WWTR1	ENST00000360632.7	2103	7	72	4101	-4	1459	3prime_fragment	FALSE	canonical	1	300895	junction_5	70593.2259214721	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	269	1333	90.0	-5	True	AAAAAG	-32
PB.7395.2	chr20	+	4715	12	novel_in_catalog	SS18L1	novel	781	5	NA	NA	-44	-7	intron_retention	FALSE	canonical	1	27220	junction_1	41588.11607810121	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	325	1446	50.0	-20	True	AATAAA	-11
PB.7395.1	chr20	+	4542	11	full-splice_match	SS18L1	ENST00000331758.7	4493	11	-56	7	-56	-7	multi-exon	FALSE	canonical	1	85042	junction_3	24192.61075204576	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	83	1273	50.0	-32	True	AATAAA	-11
PB.6890.3	chr2	+	3726	31	novel_not_in_catalog	ITGAV	novel	7030	30	NA	NA	-55	2	any annotated donor/acceptor	FALSE	canonical	1	1028	junction_30	167311.6016690481	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	330	3464	10.0	-3	True	AATAAA	-17
PB.9114.2	chr5	+	1020	6	full-splice_match	PDCD6	ENST00000264933.8	1135	6	27	88	1	-68	multi-exon	FALSE	canonical	1	609891	junction_2	452983.0061825278	NA	2	NA	TRUE	NA	NA	NA	C	coding	191	576	74	649	10.0	2	True	TTTAAA	-25
PB.10505.1	chr7	-	2421	2	full-splice_match	C7orf25	ENST00000350427.4	2451	2	137	-107	58	107	multi-exon	FALSE	canonical	1	76206	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	140	1405	20.0	37	True	ATTAAA	-20
PB.100.5	chr1	+	4586	19	novel_in_catalog	MFN2	novel	4531	18	NA	NA	-9	1	intron_retention	FALSE	canonical	1	28479	junction_1	191729.7853610214	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	369	2642	10.0	-20	True	AATAAA	-18
PB.1507.21	chr10	-	1745	3	incomplete-splice_match	WAPL	ENST00000298767.9	6333	19	-12	64727	-12	-32930	3prime_fragment	FALSE	canonical	1	149587	junction_2	62591.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1260	486	1745	50.0	-36	False	ACTAAA	-4
PB.1507.20	chr10	-	3282	3	incomplete-splice_match	WAPL	ENST00000618527.4	6152	20	-22	63152	-22	-31356	intron_retention	FALSE	canonical	1	149587	junction_2	62591.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	449	2083	85.0	1	True	GGGGCT	-18
PB.9002.25	chr4	-	4113	14	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-203	-40448	any annotated donor/acceptor	FALSE	canonical	1	2441	junction_1	47634.1803909209	NA	3	NA	TRUE	NA	NA	NA	B	coding	401	1206	559	1764	5.0	395	False	ATTAAA	-17
PB.1095.2	chr1	-	4187	23	novel_in_catalog	LAMB3	novel	4055	23	NA	NA	17	47	combination_of_known_junctions	TRUE	canonical	1	27898	junction_22	265316.4249689408	NA	0	NA	TRUE	NA	NA	NA	A	coding	1172	3519	328	3846	70.0	-6	True	NA	NA
PB.3240.1	chr13	+	2475	23	full-splice_match	PCCA	ENST00000376286.8	2481	23	6	0	6	0	multi-exon	FALSE	canonical	1	4806	junction_1	62648.413171187094	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	101	2209	25.0	-96	False	AATAAA	-16
PB.3240.2	chr13	+	2119	22	novel_in_catalog	PCCA	novel	2481	23	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	3771	junction_21	63496.73529465405	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	52	1974	10.0	-47	True	AATAAA	-18
PB.3240.3	chr13	+	2156	23	novel_not_in_catalog	PCCA	novel	2481	23	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	1845	junction_22	71677.01177758205	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	39	2138	10.0	-34	True	AATAAA	-18
PB.3240.4	chr13	+	2339	23	full-splice_match	PCCA	ENST00000376279.7	2418	23	78	1	-7	-1	multi-exon	FALSE	canonical	1	26409	junction_21	65162.16945487708	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	29	2074	25.0	-24	True	AATAAA	-15
PB.3240.5	chr13	+	2463	24	full-splice_match	PCCA	ENST00000376285.5	2494	24	29	2	12	1	multi-exon	FALSE	canonical	1	64356	junction_1	55325.50309530482	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	10	2196	20.0	-5	True	AATAAA	-17
PB.10119.2	chr6	-	4151	24	novel_not_in_catalog	MMS22L	novel	8643	25	NA	NA	-1	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	29372.538888366158	NA	0	NA	TRUE	NA	NA	NA	B	coding	1018	3057	828	3884	10.0	-3	True	ATTAAA	-12
PB.12105.1	chrX	+	2630	6	full-splice_match	KLF8	ENST00000468660.5	1543	6	-662	-425	-36	-3	multi-exon	TRUE	canonical	1	21582	junction_3	9227.622133572657	NA	0	NA	TRUE	NA	NA	NA	A	coding	356	1071	960	2030	30.0	-8	True	AATAAA	-20
PB.6251.8	chr19	+	2123	3	full-splice_match	ZNF134	ENST00000396161.9	4914	3	-8	2799	5	1477	multi-exon	FALSE	canonical	1	66194	junction_1	23143.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	319	1602	15.0	1	True	AATAAA	-21
PB.6251.5	chr19	+	3484	2	full-splice_match	ZNF134	ENST00000597975.1	559	2	-11	-2914	-11	-1362	multi-exon	FALSE	canonical	1	24031	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	762	1526	20.0	-20	True	NA	NA
PB.6251.4	chr19	+	3670	2	full-splice_match	ZNF134	ENST00000597975.1	559	2	-11	-3100	-11	-1176	multi-exon	FALSE	canonical	1	24031	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	762	1526	70.0	-20	True	NA	NA
PB.6251.7	chr19	+	3756	3	full-splice_match	ZNF134	ENST00000396161.9	4914	3	-18	1176	0	-1176	multi-exon	FALSE	canonical	1	66194	junction_1	23143.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	329	1612	70.0	-9	True	NA	NA
PB.6251.6	chr19	+	4588	3	full-splice_match	ZNF134	ENST00000396161.9	4914	3	-19	345	-1	-345	multi-exon	FALSE	canonical	1	66194	junction_1	23143.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	330	1613	80.0	-10	True	NA	NA
PB.6251.1	chr19	+	4963	3	full-splice_match	ZNF134	ENST00000396161.9	4914	3	-44	-5	-26	5	multi-exon	FALSE	canonical	1	66194	junction_1	23143.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	355	1638	20.0	-35	False	NA	NA
PB.6890.8	chr2	+	3907	30	full-splice_match	ITGAV	ENST00000261023.7	7030	30	6	3117	6	343	multi-exon	FALSE	canonical	1	390989	junction_13	127968.89861501347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	269	3415	30.0	15	True	ACTAAA	-15
PB.6251.3	chr19	+	4505	2	full-splice_match	ZNF134	ENST00000597975.1	559	2	-15	-3931	-15	-345	multi-exon	FALSE	canonical	1	24031	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	766	1530	80.0	-24	True	NA	NA
PB.6251.2	chr19	+	3437	3	full-splice_match	ZNF134	ENST00000396161.9	4914	3	107	1370	102	-1370	multi-exon	FALSE	canonical	1	66194	junction_1	23143.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	204	1487	35.0	116	False	NA	NA
PB.9778.6	chr6	+	2614	11	full-splice_match	ALDH5A1	ENST00000348925.2	2266	11	-21	-327	-21	327	multi-exon	FALSE	canonical	1	12280	junction_4	73861.4195967015	NA	2	NA	TRUE	NA	NA	NA	C	coding	548	1647	50	1696	65.0	1	True	AGTAAA	-11
PB.10119.1	chr6	-	4213	25	novel_in_catalog	MMS22L	novel	8643	25	NA	NA	-8	14	combination_of_known_junctions	FALSE	canonical	1	49701	junction_12	18985.399432807935	NA	0	NA	TRUE	NA	NA	NA	B	coding	1243	3732	207	3938	15.0	-10	True	ATTAAA	-20
PB.10054.8	chr6	+	3411	22	novel_in_catalog	FAM135A	novel	529	5	NA	NA	2	-103	no_combination_of_known_junctions	FALSE	canonical	1	483	junction_15	44938.84352586498	NA	4	NA	TRUE	NA	NA	NA	C	coding	453	1362	507	1868	35.0	9	True	ATTAAA	-24
PB.9778.7	chr6	+	3612	11	full-splice_match	ALDH5A1	ENST00000348925.2	2266	11	0	-1346	0	1346	multi-exon	FALSE	canonical	1	12280	junction_4	73861.4195967015	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	29	1675	75.0	0	True	NA	NA
PB.10054.9	chr6	+	2017	10	incomplete-splice_match	FAM135A	ENST00000361499.7	5042	22	-44	77699	-16	-22000	3prime_fragment	FALSE	canonical	1	74506	junction_1	29347.994567109883	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	389	1276	40.0	26	True	AATAAA	-16
PB.7088.1	chr2	+	2198	14	novel_in_catalog	MLPH	novel	744	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	76261	junction_9	158693.85137047025	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	232	1794	20.0	-20	False	AAAAAG	-23
PB.7389.1	chr20	+	2482	5	full-splice_match	EDN3	ENST00000337938.6	2636	5	153	1	33	0	multi-exon	FALSE	canonical	1	14630	junction_1	5937.608835844611	NA	0	NA	TRUE	NA	NA	NA	A	coding	238	717	234	950	5.0	0	True	AATAAA	-20
PB.10119.4	chr6	-	2484	10	novel_not_in_catalog	MMS22L	novel	8643	25	NA	NA	-30	-1202	any annotated donor/acceptor	FALSE	canonical	1	8961	junction_1	32441.140091625086	NA	1	NA	TRUE	NA	NA	NA	B	coding	331	996	229	1224	85.0	-32	False	NA	NA
PB.7446.4	chr21	+	2572	4	novel_in_catalog	CU633904.1	novel	560	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	334	789	25.0	NA	False	NA	NA
PB.134.1	chr1	-	1349	7	full-splice_match	AKR7A2	ENST00000235835.7	1362	7	8	5	8	-5	multi-exon	FALSE	canonical	1	293164	junction_1	143622.63339554885	NA	0	NA	TRUE	NA	NA	NA	A	coding	330	993	102	1094	25.0	-36	True	AATAAA	-45
PB.8355.10	chr3	-	4250	11	novel_in_catalog	CCDC14	novel	374	2	NA	NA	-1	0	intron_retention	FALSE	canonical	1	166439	junction_8	113284.49924685195	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	988	3198	25.0	-33	True	ATTAAA	-13
PB.8355.11	chr3	-	3716	12	full-splice_match	CCDC14	ENST00000488653.6	4156	12	166	274	-13	0	multi-exon	FALSE	canonical	1	18313	junction_8	146370.9670819743	NA	1	NA	TRUE	NA	NA	NA	C	coding	864	2595	70	2664	25.0	-14	True	ATTAAA	-13
PB.9833.1	chr6	+	2804	2	full-splice_match	AL645939.5	ENST00000648999.1	1877	2	55	-982	55	982	multi-exon	FALSE	canonical	1	1605	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	NA	False	NA	NA
PB.8355.13	chr3	-	3264	13	full-splice_match	CCDC14	ENST00000409697.7	2962	13	0	-302	0	-1	multi-exon	FALSE	canonical	1	109845	junction_9	132517.17627349295	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	88	2805	20.0	-32	True	ATTAAA	-16
PB.8355.14	chr3	-	2983	13	full-splice_match	CCDC14	ENST00000409697.7	2962	13	-28	7	-16	-7	multi-exon	FALSE	canonical	1	109845	junction_9	132517.17627349295	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	116	2833	45.0	146	False	AATAAA	-21
PB.855.2	chr1	-	3335	7	full-splice_match	CD84	ENST00000368054.7	8181	7	-60	4906	-17	2085	multi-exon	FALSE	canonical	1	36641	junction_3	13776.22755268413	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	97	1083	85.0	6	False	NA	NA
PB.9778.3	chr6	+	5155	10	full-splice_match	ALDH5A1	ENST00000357578.7	5248	10	92	1	-25	-1	multi-exon	FALSE	canonical	1	84370	junction_1	51810.77487488295	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	54	1661	15.0	-3	True	AATAAA	-31
PB.6712.2	chr2	+	1685	3	novel_in_catalog	DBI	novel	637	4	NA	NA	2	-7	intron_retention	FALSE	canonical	1	3024702	junction_1	807242.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	359	985	35.0	2	True	ATTAAA	-17
PB.6712.1	chr2	+	613	4	full-splice_match	DBI	ENST00000355857.7	637	4	4	20	1	-6	multi-exon	FALSE	canonical	1	3024702	junction_2	1198695.719081647	NA	1	NA	TRUE	NA	NA	NA	C	coding	87	264	128	391	40.0	-3828	False	ATTAAA	-18
PB.1806.1	chr11	-	3793	7	full-splice_match	NRIP3	ENST00000309166.7	3809	7	15	1	15	-1	multi-exon	FALSE	canonical	1	66996	junction_6	11245.54992603247	NA	2	NA	TRUE	NA	NA	NA	A	coding	225	678	148	825	20.0	470	False	AATAAA	-18
PB.9778.1	chr6	+	2575	10	full-splice_match	ALDH5A1	ENST00000357578.7	5248	10	96	2577	-21	327	multi-exon	FALSE	canonical	1	84370	junction_1	51810.77487488295	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	50	1657	65.0	1	True	AGTAAA	-11
PB.11098.5	chr8	+	7309	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	21990	junction_1	171463.2157189626	NA	3	NA	TRUE	NA	NA	NA	C	coding	748	2247	59	2305	10.0	-2	True	AATAAA	-18
PB.11312.2	chr8	-	3227	25	full-splice_match	ENPP2	ENST00000075322.10	2651	25	-141	-435	-141	0	multi-exon	FALSE	canonical	1	230093	junction_7	70909.98166541809	NA	1	1	TRUE	NA	NA	NA	C	coding	863	2592	201	2792	5.0	606	False	AATAAA	-17
PB.11312.3	chr8	-	3179	26	full-splice_match	ENPP2	ENST00000522826.5	2667	26	-78	-434	-19	0	multi-exon	FALSE	canonical	1	125417	junction_6	86582.48894362876	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	79	2745	5.0	728	False	AATAAA	-16
PB.8319.7	chr3	+	1347	7	full-splice_match	TIMMDC1	ENST00000494664.5	2394	7	26	1021	6	3	multi-exon	FALSE	canonical	1	704621	junction_1	165969.2469421837	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	177	1034	30.0	8	True	AATAAA	-24
PB.11001.1	chr8	+	1405	3	full-splice_match	NAT1	ENST00000307719.8	1815	3	27	383	-10	84	multi-exon	FALSE	canonical	1	47474	junction_1	16760.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	290	873	147	1019	60.0	11	True	ATTAAA	-12
PB.11226.28	chr8	-	4322	16	full-splice_match	NBN	ENST00000265433.7	4666	16	49	295	-2	-147	multi-exon	FALSE	canonical	1	198817	junction_14	118152.53893110662	NA	2	NA	TRUE	NA	NA	NA	C	coding	754	2265	107	2371	25.0	-1	True	NA	NA
PB.11098.7	chr8	+	2489	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-2	-12	combination_of_known_junctions	FALSE	canonical	1	21990	junction_1	170801.37103974182	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	59	2392	80.0	-2	True	NA	NA
PB.1821.2	chr11	-	1916	7	novel_not_in_catalog	GALNT18	novel	2504	11	NA	NA	3	-94153	any annotated donor/acceptor	FALSE	canonical	1	6712	junction_1	42745.51098718502	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	410	1516	80.0	-1	True	NA	NA
PB.1821.1	chr11	-	2507	11	full-splice_match	GALNT18	ENST00000227756.4	2504	11	-11	8	-11	-8	multi-exon	FALSE	canonical	1	70097	junction_5	22853.856958727996	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	424	2247	35.0	-15	True	AATAAA	-9
PB.9480.20	chr5	-	1951	10	incomplete-splice_match	HSPA9	ENST00000297185.8	2825	17	-29	5588	-14	-1203	3prime_fragment	FALSE	canonical	1	478276	junction_3	547518.4647461673	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	113	1342	80.0	244	False	AATACA	-20
PB.68.12	chr1	-	3486	3	full-splice_match	ENO1	ENST00000492343.2	1247	3	4	-2243	0	-655	multi-exon	FALSE	canonical	1	5131498	junction_1	4245589.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-3	True	NA	NA
PB.6786.12	chr2	-	3561	25	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	18	760	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	304744.27530795755	NA	3	1	TRUE	NA	NA	NA	B	coding	723	2172	630	2801	80.0	-5	True	NA	NA
PB.7707.2	chr22	+	2273	4	novel_in_catalog	TUG1	novel	375	2	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1397	junction_1	118653.5625339585	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	398	805	90.0	0	True	GATAAA	-16
PB.7707.3	chr22	+	1745	3	novel_in_catalog	TUG1	novel	375	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2333	junction_1	122929.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	GATAAA	-17
PB.7458.13	chr21	-	1651	5	full-splice_match	HSPA13	ENST00000285667.3	3986	5	41	2294	41	-2294	multi-exon	FALSE	canonical	1	309356	junction_4	48688.41559857951	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	28	1443	55.0	-1	True	NA	NA
PB.7707.1	chr22	+	1903	4	full-splice_match	TUG1	ENST00000646496.1	4650	4	-33	2780	-9	0	multi-exon	FALSE	canonical	1	2704	junction_1	102467.73572636848	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	13	True	GATAAA	-17
PB.7707.6	chr22	+	3035	1	incomplete-splice_match	TUG1	ENST00000644773.1	7469	3	6544	547	3551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	452	False	NA	NA
PB.7707.4	chr22	+	2693	3	full-splice_match	TUG1	ENST00000647354.1	5875	3	426	2756	-30	0	multi-exon	FALSE	canonical	1	172229	junction_2	42753.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	135	408	803	1210	90.0	-4634	False	GATAAA	-17
PB.7707.5	chr22	+	2225	3	full-splice_match	TUG1	ENST00000540687.6	3308	3	1088	-5	-15	0	multi-exon	FALSE	canonical	1	248192	junction_2	4771.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	349	756	90.0	-4180	False	GATAAA	-17
PB.10956.9	chr7	-	2898	22	novel_not_in_catalog	ESYT2	novel	5960	22	NA	NA	8979	-1	any annotated donor/acceptor	FALSE	canonical	1	14542	junction_21	226574.68735674614	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	152	2305	50.0	6	True	AATAAA	-14
PB.7707.8	chr22	+	3080	1	incomplete-splice_match	TUG1	ENST00000644773.1	7469	3	7040	6	4047	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	948	False	AATAAA	-12
PB.8319.1	chr3	+	3141	6	novel_in_catalog	TIMMDC1	novel	2394	7	NA	NA	-1	18	intron_retention	FALSE	canonical	1	837434	junction_1	135978.18590847577	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	AATAAA	-39
PB.9533.3	chr5	+	2060	10	novel_not_in_catalog	RNF14	novel	938	4	NA	NA	-4	-1147	any annotated donor/acceptor	FALSE	canonical	1	399	junction_8	126631.65401399838	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	249	1637	30.0	-5	True	NA	NA
PB.10401.16	chr7	+	3439	11	novel_in_catalog	MIOS	novel	3453	13	NA	NA	0	4	intron_retention	FALSE	canonical	1	12380	junction_1	98180.99476095157	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	677	3304	20.0	16	True	AATAAA	-18
PB.9533.1	chr5	+	1899	9	full-splice_match	RNF14	ENST00000394520.6	4235	9	94	2242	-3	-1136	multi-exon	FALSE	canonical	1	76622	junction_1	117967.19838767682	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	216	1640	50.0	28	True	NA	NA
PB.7973.2	chr3	-	2310	8	full-splice_match	SGO1	ENST00000417364.1	1075	8	-74	-1161	5	-2	multi-exon	FALSE	canonical	1	24121	junction_2	52796.83867893792	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	262	1089	10.0	4	True	AATAAA	-16
PB.9533.7	chr5	+	3557	9	full-splice_match	RNF14	ENST00000394520.6	4235	9	79	599	7	507	multi-exon	FALSE	canonical	1	76622	junction_1	117967.19838767682	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	231	1655	100.0	13	True	NA	NA
PB.9533.6	chr5	+	2870	8	full-splice_match	RNF14	ENST00000394514.6	2905	8	0	35	0	-35	multi-exon	FALSE	canonical	1	60544	junction_3	143715.71125734333	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	464	1510	75.0	6	True	NA	NA
PB.9533.5	chr5	+	2728	7	novel_in_catalog	RNF14	novel	938	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	17956	junction_1	156873.8615647935	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	287	1333	30.0	9	True	NA	NA
PB.9533.4	chr5	+	2850	8	full-splice_match	RNF14	ENST00000347642.7	4213	8	223	1140	-2	-35	multi-exon	FALSE	canonical	1	17956	junction_1	134799.52874168215	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	66	1490	75.0	4	True	NA	NA
PB.3398.14	chr14	+	3954	23	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-22	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	59825.47744609225	NA	1	NA	TRUE	NA	NA	NA	B	coding	691	2076	311	2386	15.0	0	True	AATATA	-21
PB.9533.9	chr5	+	2145	10	novel_not_in_catalog	RNF14	novel	938	4	NA	NA	-3	-770	any annotated donor/acceptor	FALSE	canonical	1	6730	junction_9	139824.77630163572	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	216	1640	30.0	28	True	TATAAA	-19
PB.9533.8	chr5	+	2779	8	novel_not_in_catalog	RNF14	novel	938	4	NA	NA	-3	2	any annotated donor/acceptor	FALSE	canonical	1	1654	junction_3	155465.64280514306	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	216	1382	25.0	28	True	NA	NA
PB.3398.10	chr14	+	2793	22	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-31	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	58124.0755622291	NA	1	NA	TRUE	NA	NA	NA	B	coding	681	2046	320	2365	30.0	-9	True	AATAAA	-18
PB.3830.9	chr15	+	6361	13	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	22291	junction_1	66047.50304573511	NA	4	NA	TRUE	NA	NA	NA	C	coding	466	1401	99	1499	20.0	-10	True	NA	NA
PB.3398.12	chr14	+	2791	22	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-59	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	57640.12779813238	NA	4	NA	TRUE	NA	NA	NA	B	coding	724	2175	237	2411	25.0	-14	True	AATAAA	-13
PB.3398.13	chr14	+	2707	21	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-56	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	59349.2082591672	NA	7	NA	TRUE	NA	NA	NA	B	coding	681	2046	234	2279	30.0	-11	True	AATAAA	-18
PB.3469.12	chr14	+	2947	16	incomplete-splice_match	KIAA0586	ENST00000619416.4	8233	32	324	83401	-2	19397	internal_fragment	FALSE	canonical	1	66025	junction_8	18722.733694510414	NA	0	NA	TRUE	NA	NA	NA	B	coding	802	2406	540	2945	45.0	-2	True	AGTAAA	-34
PB.8461.43	chr3	-	1678	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	6	18	any annotated donor/acceptor	FALSE	canonical	1	2825	junction_5	192702.29149858482	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	275	1465	20.0	-11	True	AATAAA	-22
PB.10401.13	chr7	+	3130	11	novel_not_in_catalog	MIOS	novel	3453	13	NA	NA	5	-24	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	130448.93751104298	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	1440	2750	55.0	5	True	AATAAA	-15
PB.5863.1	chr19	-	1804	7	novel_in_catalog	PBX4	novel	727	2	NA	NA	-20	-3	intron_retention	FALSE	canonical	1	15920	junction_6	7996.2529436536015	NA	0	NA	TRUE	NA	NA	NA	A	coding	209	630	866	1495	15.0	-27	True	ATTAAA	-16
PB.8688.4	chr4	+	4808	9	full-splice_match	KIAA0232	ENST00000425103.5	7771	9	4	2959	-4	-2953	multi-exon	FALSE	canonical	1	38469	junction_1	56066.03837760766	NA	1	NA	TRUE	NA	NA	NA	C	coding	1395	4188	376	4563	25.0	4	True	AATAGA	-21
PB.8688.1	chr4	+	2808	6	incomplete-splice_match	KIAA0232	ENST00000425103.5	7771	9	-39	21398	-39	1833	3prime_fragment	FALSE	canonical	1	38469	junction_1	64768.80486036468	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2388	419	2806	80.0	-39	True	AAAACA	-36
PB.8688.3	chr4	+	7065	10	novel_not_in_catalog	KIAA0232	novel	563	2	NA	NA	-31	-803	any annotated donor/acceptor	FALSE	canonical	1	38469	junction_1	75275.1843253132	NA	4	NA	TRUE	NA	NA	NA	C	coding	1419	4260	411	4670	35.0	-31	True	AATAAA	-7
PB.8688.2	chr4	+	7001	9	full-splice_match	KIAA0232	ENST00000425103.5	7771	9	-39	809	-39	-803	multi-exon	FALSE	canonical	1	38469	junction_1	56066.03837760766	NA	1	NA	TRUE	NA	NA	NA	C	coding	1395	4188	419	4606	35.0	-39	True	AATAAA	-7
PB.9100.11	chr4	-	2348	5	full-splice_match	SORBS2	ENST00000466289.5	1031	5	-567	-750	0	154	multi-exon	FALSE	canonical	1	128530	junction_4	98693.54612986352	NA	6	NA	TRUE	NA	NA	NA	C	coding	152	459	664	1122	75.0	-1	True	TTTAAA	-32
PB.7262.41	chr20	-	2117	3	full-splice_match	RBM12	ENST00000374104.7	5213	3	-1	3097	-1	1027	multi-exon	FALSE	canonical	1	91812	junction_2	271577.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1899	218	2116	60.0	-2	True	NA	NA
PB.9100.13	chr4	-	1856	6	novel_not_in_catalog	SORBS2	novel	5529	15	NA	NA	0	154	any annotated donor/acceptor	FALSE	canonical	1	123	junction_3	115060.16682866405	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	664	1236	75.0	-1	True	TTTAAA	-32
PB.9362.1	chr5	-	6552	36	full-splice_match	CHD1	ENST00000614616.4	8095	36	313	1230	313	-11	multi-exon	FALSE	canonical	1	65261	junction_35	79525.67178786368	NA	4	NA	TRUE	NA	NA	NA	C	coding	1710	5133	255	5387	45.0	-1	True	ATTAAA	-4
PB.9100.14	chr4	-	1661	4	full-splice_match	SORBS2	ENST00000485380.5	658	4	-621	-382	0	-83	multi-exon	FALSE	canonical	1	57110	junction_2	108328.42251536144	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	664	1077	25.0	-1	True	ATTAAA	-18
PB.5932.1	chr19	+	891	7	full-splice_match	TMEM147	ENST00000222284.9	899	7	8	0	3	0	multi-exon	FALSE	canonical	1	1281197	junction_1	304427.23175247025	NA	0	NA	TRUE	NA	NA	NA	A	coding	224	675	138	812	5.0	-23	True	AGTAAA	-17
PB.9382.1	chr5	+	3847	22	full-splice_match	MAN2A1	ENST00000261483.4	4667	22	797	23	797	-18	multi-exon	FALSE	canonical	1	188231	junction_1	43927.16348101172	NA	0	NA	TRUE	NA	NA	NA	C	coding	1144	3435	256	3690	95.0	-2	True	NA	NA
PB.9382.3	chr5	+	2343	1	incomplete-splice_match	MAN2A1	ENST00000503970.2	5599	2	4953	2	4953	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-643	False	AATAAA	-17
PB.4321.26	chr16	-	2462	20	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-4	-321	combination_of_known_junctions	FALSE	canonical	1	103236	junction_2	118749.27380088784	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	85	2373	25.0	-15	True	NA	NA
PB.4321.27	chr16	-	2859	19	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-9	-9280	combination_of_known_junctions	FALSE	canonical	1	22668	junction_1	123683.76532287673	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	90	2417	90.0	-20	True	NA	NA
PB.4321.24	chr16	-	2806	20	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	18366	junction_1	141241.10830040943	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	109	2436	75.0	-39	True	NA	NA
PB.4321.25	chr16	-	2742	19	full-splice_match	ARHGAP17	ENST00000303665.9	3219	19	-22	499	-12	0	multi-exon	FALSE	canonical	1	164799	junction_18	95290.78668445002	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	93	2504	75.0	-23	True	NA	NA
PB.4321.22	chr16	-	2934	19	full-splice_match	ARHGAP17	ENST00000303665.9	3219	19	-38	323	-28	176	multi-exon	FALSE	canonical	1	164799	junction_18	95290.78668445002	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	109	2520	15.0	-39	True	AATAAA	-25
PB.4321.23	chr16	-	3138	20	full-splice_match	ARHGAP17	ENST00000289968.10	3461	20	-9	332	1	175	multi-exon	FALSE	canonical	1	164799	junction_19	105025.26299254736	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2646	80	2725	15.0	-10	True	AATAAA	-24
PB.4321.20	chr16	-	3559	22	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	4586	junction_2	145854.60762907143	NA	15	1	TRUE	NA	NA	NA	C	coding	853	2562	85	2646	45.0	-15	True	ATTAAA	-16
PB.4321.21	chr16	-	3196	20	novel_not_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-14	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	124234.37025104256	NA	2	1	TRUE	NA	NA	NA	C	coding	789	2370	95	2464	45.0	-25	True	ATTAAA	-16
PB.1059.2	chr1	-	3290	12	novel_in_catalog	DSTYK	novel	7739	12	NA	NA	-45	-4240	no_combination_of_known_junctions	FALSE	canonical	1	6332	junction_11	34374.53778165576	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	573	2477	35.0	90	False	NA	NA
PB.3830.7	chr15	+	4649	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	397	1782	9	24	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	167	1567	5.0	2	True	AATGAA	-21
PB.1059.1	chr1	-	4991	13	full-splice_match	DSTYK	ENST00000367162.7	7874	13	-159	3042	-159	-3042	multi-exon	TRUE	canonical	1	50842	junction_12	23707.184184804028	NA	1	NA	TRUE	NA	NA	NA	C	coding	929	2790	191	2980	95.0	-24	True	NA	NA
PB.7272.5	chr20	+	2746	3	novel_in_catalog	TGIF2	novel	3432	3	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	1	1851	junction_2	28447.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2	True	AATAAA	-25
PB.1059.4	chr1	-	3516	13	full-splice_match	DSTYK	ENST00000367162.7	7874	13	-33	4391	-33	-4391	multi-exon	FALSE	canonical	1	50842	junction_12	23707.184184804028	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	65	2854	85.0	102	False	NA	NA
PB.3830.6	chr15	+	3517	13	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	-16	232	combination_of_known_junctions	FALSE	canonical	1	22291	junction_1	66047.50304573511	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	112	1512	35.0	-23	True	AATAAA	-20
PB.7272.4	chr20	+	3128	4	novel_not_in_catalog	TGIF2	novel	3432	3	NA	NA	10	2	intron_retention	FALSE	non_canonical	0	0	junction_3	90214.85206747032	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	164	877	30.0	1	True	AATAAA	-25
PB.5908.4	chr19	+	2944	20	full-splice_match	GPATCH1	ENST00000170564.6	3492	20	305	243	286	-107	multi-exon	FALSE	canonical	1	70922	junction_17	21550.447305677724	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	10	2805	35.0	2	True	TTTAAA	-14
PB.77.14	chr1	+	5555	23	novel_in_catalog	PIK3CD	novel	5483	25	NA	NA	1	-8	intron_retention	FALSE	canonical	1	83178	junction_1	50899.720985714186	NA	1	NA	TRUE	NA	NA	NA	C	coding	828	2487	1204	3690	60.0	15	True	AGTAAA	-9
PB.5908.1	chr19	+	2671	19	incomplete-splice_match	GPATCH1	ENST00000170564.6	3492	20	299	3918	280	-3782	3prime_fragment	FALSE	canonical	1	70922	junction_17	21828.35030788127	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2655	16	2670	70.0	-4	True	NA	NA
PB.9523.1	chr5	+	3618	1	full-splice_match	PCDHGB1	ENST00000611598.1	2592	1	-23	-1003	-23	1003	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	810	2433	183	2615	10.0	-9926	False	NA	NA
PB.5908.3	chr19	+	2081	15	incomplete-splice_match	GPATCH1	ENST00000170564.6	3492	20	301	16251	282	1612	3prime_fragment	FALSE	canonical	1	72226	junction_8	18230.821703356978	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	14	2080	55.0	-2	True	AAGAAA	-30
PB.2821.1	chr12	+	2786	16	novel_not_in_catalog	CFAP54	novel	1967	12	NA	NA	13325	2	any annotated donor/acceptor	FALSE	canonical	1	611	junction_1	2253.308544242345	NA	4	NA	TRUE	NA	NA	NA	A	coding	610	1833	800	2632	15.0	0	True	AATAAA	-19
PB.11765.1	chr9	-	1716	4	full-splice_match	TTLL11	ENST00000373776.4	2012	4	298	-2	-24	2	multi-exon	FALSE	canonical	1	34282	junction_1	6937.900402859644	NA	0	NA	TRUE	NA	NA	NA	A	coding	448	1347	161	1507	25.0	-29	True	NA	NA
PB.7272.1	chr20	+	3303	3	full-splice_match	TGIF2	ENST00000373874.6	3432	3	126	3	7	2	multi-exon	FALSE	canonical	1	11386	junction_1	101237.5	NA	1	1	TRUE	NA	NA	NA	C	coding	237	714	74	787	30.0	-2	True	AATAAA	-25
PB.1221.21	chr1	-	2671	9	incomplete-splice_match	NID1	ENST00000264187.6	5864	20	-42	47822	-42	-47822	3prime_fragment	FALSE	canonical	1	270073	junction_6	24952.196496187968	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2238	126	2363	60.0	-3	True	NA	NA
PB.8715.1	chr4	+	1561	1	novel_in_catalog	PACRGL	novel	1394	10	NA	NA	27193	-11032	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	32	NA	NA	NA	NA	NA	C	coding	115	348	851	1198	70.0	NA	False	NA	NA
PB.1015.14	chr1	+	2424	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	139	3379	-6	245	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	105	1700	20.0	-367	False	ATTAAA	-16
PB.1015.10	chr1	+	3306	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	166	2470	1	-980	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	78	1673	40.0	-8	True	AATAAA	-14
PB.1015.11	chr1	+	3496	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	101	2345	-44	-855	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	143	1738	30.0	25	True	CATAAA	-20
PB.1015.12	chr1	+	4590	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	107	1245	-38	244	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	4	NA	TRUE	NA	NA	NA	C	coding	531	1596	137	1732	35.0	31	True	NA	NA
PB.1015.13	chr1	+	5445	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	130	367	-15	-367	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	4	NA	TRUE	NA	NA	NA	C	coding	531	1596	114	1709	40.0	-376	False	AATAAA	-14
PB.7272.10	chr20	+	3390	3	full-splice_match	TGIF2	ENST00000611732.4	3344	3	-44	-2	-44	2	multi-exon	FALSE	canonical	1	31572	junction_1	91144.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	237	714	161	874	30.0	-6	True	AATAAA	-25
PB.7511.1	chr21	+	3205	1	novel_in_catalog	CBR1	novel	1924	3	NA	NA	21	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	254	765	2157	2921	25.0	-62	True	AATAAA	-19
PB.7272.9	chr20	+	3423	3	novel_not_in_catalog	TGIF2	novel	3432	3	NA	NA	291	2	intron_retention	FALSE	canonical	1	2763	junction_1	105549.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	237	714	194	907	30.0	-618	False	AATAAA	-25
PB.8709.5	chr4	+	1827	13	full-splice_match	LAP3	ENST00000606142.5	1876	13	-47	96	-4	-96	multi-exon	FALSE	canonical	1	285855	junction_2	228718.45085842197	NA	2	NA	TRUE	NA	NA	NA	C	coding	488	1467	112	1578	35.0	-3173	False	ATTAAA	-16
PB.8709.4	chr4	+	1906	13	full-splice_match	LAP3	ENST00000606142.5	1876	13	8	-38	6	0	multi-exon	FALSE	canonical	1	285855	junction_2	228718.45085842197	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	57	1523	15.0	6	True	AATAAA	-20
PB.8709.7	chr4	+	3009	13	novel_in_catalog	LAP3	novel	2213	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	7822	junction_6	280939.5565364352	NA	3	NA	TRUE	NA	NA	NA	C	coding	287	864	1767	2630	10.0	1	True	AATAAA	-16
PB.7272.8	chr20	+	2773	3	novel_in_catalog	TGIF2	novel	3432	3	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	1	2584	junction_2	28080.5	NA	20	NA	TRUE	NA	NA	NA	C	coding	102	309	142	450	30.0	23	True	AATAAA	-22
PB.8709.1	chr4	+	3291	12	novel_in_catalog	LAP3	novel	2213	13	NA	NA	11	2	intron_retention	FALSE	canonical	1	285855	junction_2	219196.92245279555	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	123	1232	10.0	0	True	AATAAA	-18
PB.87.15	chr1	+	2140	7	novel_in_catalog	TARDBP	novel	701	5	NA	NA	1	-1	intron_retention	FALSE	canonical	1	48074	junction_6	375459.1259948352	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	102	1346	30.0	-4	True	AATAAA	-15
PB.8709.3	chr4	+	2064	14	novel_not_in_catalog	LAP3	novel	2213	13	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	359	junction_4	309396.1084642031	NA	6	NA	TRUE	NA	NA	NA	C	coding	349	1050	632	1681	15.0	5	True	AATAAA	-20
PB.8709.2	chr4	+	1681	13	full-splice_match	LAP3	ENST00000606142.5	1876	13	-58	253	11	-253	multi-exon	FALSE	canonical	1	285855	junction_2	228718.45085842197	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	123	1589	45.0	0	True	AATAAA	-23
PB.100.3	chr1	+	4413	19	full-splice_match	MFN2	ENST00000235329.9	4539	19	132	-6	9	0	multi-exon	FALSE	canonical	1	336710	junction_1	141043.34889719475	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	191	2464	10.0	-2	True	AATAAA	-23
PB.7511.2	chr21	+	3008	1	novel_in_catalog	CBR1	novel	1924	3	NA	NA	26	-192	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	254	765	2152	2916	55.0	-57	True	CATAAA	-12
PB.8517.17	chr3	-	4228	30	incomplete-splice_match	TNIK	ENST00000357327.9	3996	32	-367	2606	-22	0	3prime_fragment	FALSE	canonical	1	54308	junction_11	31657.365216553022	NA	1	NA	TRUE	NA	NA	NA	C	coding	1284	3855	368	4222	95.0	38	False	AAGAAA	-25
PB.10831.5	chr7	-	3214	23	full-splice_match	TNPO3	ENST00000265388.9	4153	23	-7	946	-7	-38	multi-exon	FALSE	canonical	1	351805	junction_19	102957.83144413907	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	152	2923	55.0	-22	True	NA	NA
PB.9362.5	chr5	-	6695	35	novel_in_catalog	CHD1	novel	8095	36	NA	NA	-9	-11	combination_of_known_junctions	FALSE	canonical	1	7179	junction_4	91038.19224923014	NA	2	NA	TRUE	NA	NA	NA	C	coding	1423	4272	577	4848	45.0	-35	True	ATTAAA	-4
PB.10151.6	chr6	-	3184	24	novel_in_catalog	MICAL1	novel	4112	25	NA	NA	897	0	combination_of_known_junctions	FALSE	canonical	1	1000	junction_23	214309.48887923427	NA	4	1	TRUE	NA	NA	NA	C	coding	981	2946	113	3058	30.0	1	True	ATTAAA	-14
PB.11771.8	chr9	-	2633	3	novel_in_catalog	PDCL	novel	404	3	NA	NA	-4	-7	no_combination_of_known_junctions	FALSE	canonical	1	10204	junction_2	180232.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	243	899	30.0	-48	False	NA	NA
PB.10151.4	chr6	-	4200	24	novel_not_in_catalog	MICAL1	novel	4112	25	NA	NA	-1	0	intron_retention	FALSE	canonical	1	9421	junction_11	212529.29273455346	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	1627	4074	30.0	-11	True	ATTAAA	-14
PB.10151.5	chr6	-	3828	25	novel_in_catalog	MICAL1	novel	4112	25	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	76964	junction_24	201598.97215397682	NA	3	2	TRUE	NA	NA	NA	C	coding	811	2436	1267	3702	30.0	17	True	ATTAAA	-14
PB.10151.2	chr6	-	2954	19	novel_not_in_catalog	MICAL1	novel	4112	25	NA	NA	169	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	227999.8801283798	NA	5	NA	TRUE	NA	NA	NA	C	coding	784	2355	473	2827	30.0	4024	False	ATTAAA	-15
PB.10151.3	chr6	-	4201	23	novel_not_in_catalog	MICAL1	novel	4112	25	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_11	218175.09265630858	NA	4	2	TRUE	NA	NA	NA	C	coding	405	1218	2858	4075	30.0	12	True	ATTAAA	-14
PB.10151.1	chr6	-	3646	25	full-splice_match	MICAL1	ENST00000358807.7	3645	25	-3	2	-3	1	multi-exon	FALSE	canonical	1	76964	junction_24	189793.9376896645	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	316	3519	30.0	-13	True	ATTAAA	-15
PB.11771.1	chr9	-	4517	5	novel_not_in_catalog	PDCL	novel	404	3	NA	NA	33	2290	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	142351.77231158732	NA	9	NA	TRUE	NA	NA	NA	C	coding	301	906	134	1039	25.0	-11	True	NA	NA
PB.11771.3	chr9	-	3109	5	novel_not_in_catalog	PDCL	novel	404	3	NA	NA	-18	833	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	142351.77231158732	NA	2	NA	TRUE	NA	NA	NA	C	coding	301	906	185	1090	100.0	-62	False	NA	NA
PB.11771.2	chr9	-	3602	4	full-splice_match	PDCL	ENST00000259467.8	2813	4	44	-833	44	833	multi-exon	FALSE	canonical	1	230087	junction_3	58248.26971392941	NA	3	NA	TRUE	NA	NA	NA	C	coding	301	906	123	1028	100.0	0	True	NA	NA
PB.11771.5	chr9	-	2771	4	full-splice_match	PDCL	ENST00000259467.8	2813	4	38	4	38	-4	multi-exon	FALSE	canonical	1	230087	junction_3	58248.26971392941	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	129	1034	35.0	-6	True	NA	NA
PB.11771.4	chr9	-	2427	5	novel_not_in_catalog	PDCL	novel	404	3	NA	NA	43	833	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	142351.77231158732	NA	11	1	TRUE	NA	NA	NA	C	coding	301	906	124	1029	100.0	-1	True	NA	NA
PB.11771.7	chr9	-	2660	4	novel_not_in_catalog	PDCL	novel	404	3	NA	NA	34	-4	any annotated donor/acceptor	FALSE	canonical	1	3654	junction_2	151193.10582680535	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	372	923	35.0	-10	True	NA	NA
PB.10675.12	chr7	-	6308	5	full-splice_match	SAMD9L	ENST00000318238.8	7134	5	-24	850	-23	128	multi-exon	FALSE	canonical	1	72731	junction_3	35372.654108611925	NA	0	NA	TRUE	NA	NA	NA	C	coding	1584	4755	1242	5996	25.0	-24	True	AATAAA	-16
PB.11793.2	chr9	+	2692	6	full-splice_match	MVB12B	ENST00000489637.3	2666	6	-24	-2	-11	2	multi-exon	FALSE	canonical	1	36102	junction_1	31649.470715321604	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	93	758	20.0	-6	True	AGTAAA	-18
PB.10831.4	chr7	-	3358	24	novel_not_in_catalog	TNPO3	novel	4153	23	NA	NA	-7	-19	any annotated donor/acceptor	FALSE	canonical	1	16763	junction_23	170163.52296106747	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	475	3048	85.0	-22	True	NA	NA
PB.4326.1	chr16	+	3715	11	full-splice_match	IL4R	ENST00000395762.6	3685	11	-29	-1	-29	1	multi-exon	FALSE	canonical	1	8857	junction_2	120483.76358667586	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	289	2766	35.0	-90	True	AATAAA	-19
PB.4326.2	chr16	+	3553	10	full-splice_match	IL4R	ENST00000543915.6	3539	10	-15	1	-2	0	multi-exon	FALSE	canonical	1	53187	junction_1	105895.34991411143	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	129	2606	35.0	-63	True	AATAAA	-17
PB.4326.3	chr16	+	3923	12	novel_not_in_catalog	IL4R	novel	529	4	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	3244	junction_8	149742.9665721723	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	1451	2977	30.0	-64	True	AATAAA	-16
PB.2465.2	chr12	-	2588	5	full-splice_match	MAGOHB	ENST00000320756.6	2623	5	26	9	3	-9	multi-exon	FALSE	canonical	1	140421	junction_1	115059.88606047722	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	66	512	40.0	-7	True	AATAAA	-12
PB.2465.3	chr12	-	3463	4	novel_in_catalog	MAGOHB	novel	2623	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	36223	junction_3	159592.95960731545	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	AATAAA	-15
PB.2465.1	chr12	-	3016	5	full-splice_match	MAGOHB	ENST00000320756.6	2623	5	23	-416	0	416	multi-exon	FALSE	canonical	1	140421	junction_1	115059.88606047722	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	69	515	35.0	-10	True	AATAAA	-11
PB.3361.4	chr14	+	1912	2	intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	16771	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-307	False	NA	NA
PB.3361.2	chr14	+	4633	3	intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	8385.5	NA	2	NA	FALSE	NA	NA	NA	A	coding	169	510	2611	3120	40.0	-5	True	ATTAAA	-25
PB.3361.3	chr14	+	3493	3	intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	2503.0	NA	5	NA	FALSE	NA	NA	NA	A	coding	169	510	1469	1978	40.0	2	True	ATTAAA	-27
PB.3361.1	chr14	+	1920	2	intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	16857	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-8	True	NA	NA
PB.8779.12	chr4	+	1899	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-11	-3	no_combination_of_known_junctions	FALSE	canonical	1	15496	junction_14	223206.42052786524	NA	14	3	TRUE	NA	NA	NA	C	coding	534	1605	208	1812	30.0	-11	True	AATAAA	-24
PB.8779.13	chr4	+	1964	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	228574.1557190868	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	207	1796	30.0	-10	True	AATAAA	-26
PB.8779.10	chr4	+	1821	18	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-15	-47	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	239001.18072523273	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1608	212	1819	70.0	-126	False	NA	NA
PB.10425.1	chr7	-	2230	1	antisense	novelGene_ABCB5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8779.16	chr4	+	2179	19	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	227263.80896280857	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	202	2013	30.0	-5	True	AATAAA	-24
PB.10831.7	chr7	-	3339	22	novel_in_catalog	TNPO3	novel	4153	23	NA	NA	25	-19	no_combination_of_known_junctions	TRUE	canonical	1	3636	junction_13	149920.3462288514	NA	3	NA	TRUE	NA	NA	NA	C	coding	436	1311	1719	3029	85.0	-9	True	NA	NA
PB.8779.14	chr4	+	3898	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-7	-45	intron_retention	FALSE	canonical	1	161024	junction_1	219357.01237533844	NA	12	1	TRUE	NA	NA	NA	C	coding	430	1293	204	1496	65.0	-7	True	NA	NA
PB.8779.15	chr4	+	3581	18	full-splice_match	FIP1L1	ENST00000337488.10	2198	18	-7	-1376	-5	183	multi-exon	FALSE	canonical	1	161024	junction_1	220806.79141835874	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	202	1986	85.0	-5	True	NA	NA
PB.8779.18	chr4	+	3535	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-4	183	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	213216.39660756043	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	201	1940	85.0	-4	True	NA	NA
PB.7644.15	chr22	-	1938	5	novel_in_catalog	PRAME	novel	2196	6	NA	NA	60	-23	combination_of_known_junctions	FALSE	canonical	1	28047	junction_3	265562.87567871757	NA	2	NA	TRUE	NA	NA	NA	C	coding	493	1482	117	1598	60.0	0	True	AAGAAA	-7
PB.7644.12	chr22	-	2186	6	full-splice_match	PRAME	ENST00000405655.7	2179	6	-9	2	-9	-2	multi-exon	FALSE	canonical	1	113431	junction_5	217566.09970342348	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	296	1825	20.0	110	False	AATAAA	-14
PB.7644.13	chr22	-	2338	6	novel_in_catalog	PRAME	novel	2196	6	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	2011	junction_4	246510.34503046723	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	448	1977	20.0	-69	False	AATAAA	-14
PB.7644.10	chr22	-	2090	5	novel_in_catalog	PRAME	novel	2196	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	878	junction_4	245801.90515573206	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	196	1725	20.0	-3	True	AATAAA	-18
PB.11780.24	chr9	+	2282	10	full-splice_match	NEK6	ENST00000546191.5	2580	10	-49	347	-49	-347	multi-exon	FALSE	canonical	1	11400	junction_1	225264.3311414776	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	23	1138	35.0	-129	False	TATAAA	-21
PB.208.2	chr1	+	4184	16	full-splice_match	WDTC1	ENST00000319394.7	4819	16	243	392	91	0	multi-exon	FALSE	canonical	1	130037	junction_1	97593.80945713492	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	293	2326	10.0	-14	False	ATTAAA	-14
PB.11625.63	chr9	-	1988	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-25	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	781904.0001667567	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	171	1490	5.0	-8	True	AATAAA	-14
PB.10058.1	chr6	+	2212	17	full-splice_match	DDX43	ENST00000370336.4	2513	17	80	221	-66	-221	multi-exon	FALSE	canonical	1	8426	junction_4	7057.256565718367	NA	0	NA	TRUE	NA	NA	NA	A	coding	648	1947	79	2025	15.0	0	True	AATAAA	-21
PB.11780.26	chr9	+	1587	10	full-splice_match	NEK6	ENST00000546191.5	2580	10	12	981	4	-981	multi-exon	FALSE	canonical	1	11400	junction_1	225264.3311414776	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	136	1077	25.0	-6	True	GATAAA	-24
PB.7179.9	chr20	-	2660	2	full-splice_match	FLRT3	ENST00000378053.3	4776	2	-23	2139	-15	-1132	multi-exon	FALSE	canonical	1	63268	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	281	2230	65.0	-1	True	AATAAA	-5
PB.9277.1	chr5	+	1457	8	full-splice_match	SMN2	ENST00000626847.2	1440	8	-16	-1	0	1	multi-exon	FALSE	canonical	1	923	junction_7	1640.2978325876788	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	55	897	20.0	NA	False	TTTAAA	-2
PB.6910.9	chr2	-	4064	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	90	156	8	-154	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	299	2551	75.0	-1	True	NA	NA
PB.10831.6	chr7	-	3519	25	novel_not_in_catalog	TNPO3	novel	4153	23	NA	NA	-7	-19	any annotated donor/acceptor	FALSE	canonical	1	1010	junction_23	189421.07911899395	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	636	3209	85.0	-22	True	NA	NA
PB.790.3	chr1	+	3261	3	novel_not_in_catalog	ZBTB7B	novel	3777	3	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	314474.0	NA	5	1	TRUE	NA	NA	NA	C	coding	422	1269	156	1424	15.0	-6345	False	AAGAAA	-20
PB.6910.3	chr2	-	4271	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	91	-52	9	52	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	298	2550	20.0	0	True	TATAAA	-22
PB.6910.2	chr2	-	6019	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	94	-1803	12	1803	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	295	2547	25.0	3	True	CATAAA	-17
PB.8563.17	chr3	+	2674	15	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	23666	junction_1	777223.4112901711	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2397	277	2673	70.0	-39	True	NA	NA
PB.11292.2	chr8	+	4664	1	novel_in_catalog	RIMS2	novel	4228	24	NA	NA	-1	-23073	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	54	165	319	483	10.0	0	True	AATAAA	-41
PB.11879.2	chr9	+	3203	1	novel_in_catalog	RPL7A	novel	891	8	NA	NA	5	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	5	True	CATAAA	-30
PB.7177.12	chr20	-	2027	1	genic	ESF1	novel	NA	NA	NA	NA	-10	-54471	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	9	True	NA	NA
PB.6910.5	chr2	-	4346	26	novel_in_catalog	STAT1	novel	663	3	NA	NA	10	45	combination_of_known_junctions	FALSE	canonical	1	32434	junction_23	465666.9244809143	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	374	2632	20.0	1	True	TATAAA	-15
PB.11780.21	chr9	+	9266	10	full-splice_match	NEK6	ENST00000545174.5	2573	10	51	-6744	41	5875	multi-exon	FALSE	canonical	1	37822	junction_1	217680.49572818677	NA	4	1	TRUE	NA	NA	NA	C	coding	313	942	90	1031	45.0	-21	True	AATAAA	-18
PB.9022.4	chr4	-	10094	57	novel_in_catalog	LRBA	novel	10032	57	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	37461	junction_56	71201.76758851983	NA	2	1	TRUE	NA	NA	NA	B	coding	2852	8559	475	9033	20.0	-1	True	AATAAA	-17
PB.11780.22	chr9	+	1688	10	novel_in_catalog	NEK6	novel	2578	10	NA	NA	-96	-981	combination_of_known_junctions	FALSE	canonical	1	12509	junction_1	224944.99574192206	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	237	1178	25.0	2	True	GATAAA	-24
PB.9022.5	chr4	-	9922	57	novel_in_catalog	LRBA	novel	10032	57	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	133877	junction_53	67133.67672188573	NA	1	NA	TRUE	NA	NA	NA	B	coding	2852	8559	303	8861	20.0	-1	True	AATAAA	-17
PB.11625.65	chr9	-	1934	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835322.5098568797	NA	2	1	TRUE	NA	NA	NA	B	coding	438	1317	177	1493	5.0	-14	True	AATAAA	-14
PB.9277.2	chr5	+	2240	7	novel_not_in_catalog	SMN2	novel	1536	9	NA	NA	5	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	1817.6658490737202	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	18	746	30.0	NA	False	NA	NA
PB.839.2	chr1	+	6236	15	full-splice_match	KIRREL1	ENST00000359209.10	2874	15	18	-3380	18	-1228	multi-exon	FALSE	canonical	1	79607	junction_8	68626.02956441171	NA	2	NA	TRUE	NA	NA	NA	C	coding	757	2274	50	2323	10.0	-17	True	ATTAAA	-21
PB.839.3	chr1	+	3603	15	full-splice_match	KIRREL1	ENST00000359209.10	2874	15	33	-762	33	364	multi-exon	FALSE	canonical	1	79607	junction_8	68626.02956441171	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	35	2308	15.0	-2	True	NA	NA
PB.6314.2	chr2	+	1756	7	full-splice_match	PQLC3	ENST00000295083.7	1830	7	59	15	0	-11	multi-exon	FALSE	canonical	1	142982	junction_5	44871.05824718448	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	117	725	25.0	-46	True	AATAAA	-19
PB.1928.9	chr11	+	5843	33	full-splice_match	MADD	ENST00000402192.6	5823	33	-19	-1	-11	0	multi-exon	FALSE	canonical	1	74580	junction_1	101772.20832290562	NA	0	NA	TRUE	NA	NA	NA	C	coding	1587	4764	199	4962	5.0	1	True	NA	NA
PB.1928.8	chr11	+	5782	32	novel_in_catalog	MADD	novel	437	3	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	74580	junction_1	102744.33197814757	NA	3	NA	TRUE	NA	NA	NA	C	coding	1522	4569	206	4774	5.0	-6	True	NA	NA
PB.1928.7	chr11	+	5718	33	novel_in_catalog	MADD	novel	437	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	46073	junction_16	119332.97721421599	NA	0	NA	TRUE	NA	NA	NA	C	coding	1499	4500	211	4710	5.0	-11	True	NA	NA
PB.1928.6	chr11	+	5746	33	novel_in_catalog	MADD	novel	437	3	NA	NA	-42	1	combination_of_known_junctions	FALSE	canonical	1	74580	junction_1	101207.60502284381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	230	4864	5.0	-30	True	NA	NA
PB.5279.4	chr17	+	5455	17	full-splice_match	SEC14L1	ENST00000436233.8	5295	17	27	-187	-26	-8	multi-exon	FALSE	canonical	1	233097	junction_4	109028.58246292575	NA	7	NA	TRUE	NA	NA	NA	C	coding	715	2148	238	2385	45.0	-17	True	AATAAA	-13
PB.5279.5	chr17	+	2692	17	full-splice_match	SEC14L1	ENST00000436233.8	5295	17	38	2565	-15	-6	multi-exon	FALSE	canonical	1	233097	junction_4	109028.58246292575	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	227	2374	50.0	-6	True	ATTAAA	-29
PB.5279.2	chr17	+	5450	18	novel_not_in_catalog	SEC14L1	novel	637	5	NA	NA	13	-8	any annotated donor/acceptor	TRUE	canonical	0	0	junction_17	145887.8596486055	NA	4	1	TRUE	NA	NA	NA	C	coding	715	2148	299	2446	45.0	15	True	AATAAA	-13
PB.3169.6	chr13	-	3929	16	novel_in_catalog	KPNA3	novel	4474	17	NA	NA	363	-19	intron_retention	FALSE	canonical	1	6223	junction_2	130058.71192801092	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	53	1318	55.0	-21	True	AATAAA	-21
PB.1928.1	chr11	+	5875	33	novel_in_catalog	MADD	novel	437	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	7682	junction_1	100900.39064560912	NA	2	1	TRUE	NA	NA	NA	C	coding	1545	4638	357	4994	5.0	-5	True	NA	NA
PB.5279.1	chr17	+	2922	18	full-splice_match	SEC14L1	ENST00000443798.8	2908	18	-22	8	-22	-8	multi-exon	FALSE	canonical	1	52017	junction_17	137744.59902596372	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	234	2393	45.0	-13	True	AATAAA	-13
PB.7588.13	chr22	+	2195	6	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-56	73	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	B	coding	119	360	534	893	15.0	NA	False	AATAAA	-24
PB.7588.12	chr22	+	2205	2	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-84	-21962	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	NA	False	TATAAA	-25
PB.7588.11	chr22	+	2166	5	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-148	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-26
PB.4327.2	chr16	+	3420	10	full-splice_match	IL21R	ENST00000564089.5	3009	10	0	-411	0	-1	multi-exon	FALSE	canonical	1	13163	junction_2	47756.47949057105	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	603	2219	25.0	0	True	AATAAA	-32
PB.10431.3	chr7	-	2447	3	full-splice_match	KLHL7-DT	ENST00000419813.1	2564	3	1	116	1	-116	multi-exon	FALSE	canonical	1	2550	junction_2	3001.5	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-23	True	NA	NA
PB.10431.2	chr7	-	2492	3	full-splice_match	KLHL7-DT	ENST00000419813.1	2564	3	12	60	12	-60	multi-exon	FALSE	canonical	1	2550	junction_2	3001.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-12	True	NA	NA
PB.2570.1	chr12	-	3546	10	full-splice_match	VDR	ENST00000549336.5	4644	10	-17	1115	1	-24	multi-exon	FALSE	canonical	1	42132	junction_9	28467.63423414192	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	169	1452	90.0	-18	True	NA	NA
PB.1011.19	chr1	-	2188	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	-14	419	combination_of_known_junctions	FALSE	canonical	1	84596	junction_1	208144.3318388183	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	116	1096	25.0	-37	True	TATAAA	-18
PB.2570.2	chr12	-	3460	9	novel_in_catalog	VDR	novel	4644	10	NA	NA	-3	-24	combination_of_known_junctions	FALSE	canonical	1	10118	junction_8	35553.931382478644	NA	2	NA	TRUE	NA	NA	NA	C	coding	424	1275	92	1366	90.0	-13	True	NA	NA
PB.3169.2	chr13	-	4089	17	full-splice_match	KPNA3	ENST00000261667.7	4474	17	366	19	366	-19	multi-exon	TRUE	canonical	1	259499	junction_8	104729.81896600578	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	50	1615	55.0	-18	True	AATAAA	-21
PB.1011.11	chr1	-	3212	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	-17	1440	combination_of_known_junctions	FALSE	canonical	1	84596	junction_1	208144.3318388183	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	119	1099	20.0	-40	True	AATAAA	-29
PB.1011.12	chr1	-	3246	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	11	1439	combination_of_known_junctions	FALSE	canonical	1	13196	junction_2	225953.99160664366	NA	2	1	TRUE	NA	NA	NA	C	coding	316	951	79	1029	25.0	0	True	AATAAA	-28
PB.1011.13	chr1	-	3134	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	115	-1434	-20	1434	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	122	1108	25.0	-43	True	AATAAA	-23
PB.1011.14	chr1	-	3218	12	full-splice_match	UCHL5	ENST00000367450.7	1355	12	-87	-1776	-22	1432	multi-exon	FALSE	canonical	1	82301	junction_4	218634.89181814183	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	124	1194	30.0	-45	True	AATAAA	-21
PB.1011.15	chr1	-	2799	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	123	-1107	-12	1107	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	114	1100	55.0	-35	True	NA	NA
PB.1011.16	chr1	-	2762	12	full-splice_match	UCHL5	ENST00000367451.8	1346	12	-26	-1390	-14	987	multi-exon	FALSE	canonical	1	82301	junction_4	214348.19771002786	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	116	1183	50.0	-37	True	NA	NA
PB.1011.17	chr1	-	2581	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	-12	814	combination_of_known_junctions	FALSE	canonical	1	84596	junction_1	208144.3318388183	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	114	1094	20.0	-35	True	AATAGA	-17
PB.11930.2	chr9	+	1668	7	incomplete-splice_match	ARRDC1	ENST00000371421.8	1586	8	-10	1	-10	-1	intron_retention	FALSE	canonical	1	242707	junction_1	140736.07406260684	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	75	1403	15.0	-10	True	AATAAA	-14
PB.11930.3	chr9	+	2039	7	novel_in_catalog	ARRDC1	novel	1586	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	242707	junction_1	143742.29554773826	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	64	435	10.0	1	True	AATAAA	-16
PB.11479.1	chr9	-	4332	9	novel_not_in_catalog	HACD4	novel	8267	7	NA	NA	-23	-4111	any annotated donor/acceptor	FALSE	canonical	1	28843	junction_2	75652.32480472345	NA	2	NA	TRUE	NA	NA	NA	C	coding	283	852	70	921	40.0	-27	False	AATAAA	-12
PB.11631.20	chr9	-	2334	13	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-38	35668	4	1	3prime_fragment	FALSE	canonical	1	143907	junction_7	96266.90517110344	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2121	212	2332	60.0	49	True	NA	NA
PB.10.10	chr1	+	3014	13	incomplete-splice_match	AGRN	ENST00000379370.6	7323	36	28894	4	488	0	5prime_fragment	FALSE	canonical	1	651956	junction_5	201639.89908929993	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	729	1883	30.0	-9436	False	AATAAA	-14
PB.10831.3	chr7	-	3373	24	full-splice_match	TNPO3	ENST00000482320.5	3585	24	193	19	14	-19	multi-exon	FALSE	canonical	1	25762	junction_22	167863.66246942308	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	490	3063	85.0	-1	True	NA	NA
PB.10325.5	chr6	-	2228	9	novel_in_catalog	TBXT	novel	2436	9	NA	NA	122	4	combination_of_known_junctions	FALSE	canonical	1	199	junction_8	6416.494797346523	NA	1	1	TRUE	NA	NA	NA	B	coding	436	1311	255	1565	25.0	226	False	AATAAA	-19
PB.7864.1	chr22	+	1783	1	antisense	novelGene_CDPF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	2	True	NA	NA
PB.10325.3	chr6	-	3893	8	incomplete-splice_match	TBXT	ENST00000296946.6	2436	9	-883	-15	-802	15	intron_retention	FALSE	canonical	1	9152	junction_3	3884.7666228855646	NA	1	NA	TRUE	NA	NA	NA	B	coding	435	1308	1912	3219	20.0	-779	False	AATAAA	-30
PB.12326.1	chrX	+	5071	4	full-splice_match	ZNF275	ENST00000650114.1	6418	4	0	1347	0	186	multi-exon	FALSE	canonical	1	17615	junction_1	30226.473297425884	NA	0	NA	TRUE	NA	NA	NA	A	coding	428	1287	181	1467	90.0	0	True	NA	NA
PB.10325.8	chr6	-	2147	7	novel_in_catalog	TBXT	novel	2436	9	NA	NA	-29	-3	no_combination_of_known_junctions	FALSE	canonical	1	425	junction_5	7027.500337958014	NA	3	NA	TRUE	NA	NA	NA	B	coding	391	1176	316	1491	30.0	1	True	AATAAA	-12
PB.644.17	chr1	+	2332	9	incomplete-splice_match	TTF2	ENST00000369466.8	9462	23	30228	4591	-2256	500	5prime_fragment	FALSE	canonical	1	204973	junction_1	25498.249817083033	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	323	994	40.0	NA	False	NA	NA
PB.11766.1	chr9	-	798	4	full-splice_match	NDUFA8	ENST00000373768.3	844	4	40	6	40	-6	multi-exon	FALSE	canonical	1	1163068	junction_3	148279.22866672862	NA	0	NA	TRUE	NA	NA	NA	A	coding	172	519	103	621	30.0	-1	True	ATTAAA	-9
PB.4328.1	chr16	-	6955	37	full-splice_match	GTF3C1	ENST00000561623.5	7015	37	-3	63	-3	0	multi-exon	FALSE	canonical	1	202573	junction_36	87197.12716550166	NA	0	NA	TRUE	NA	NA	NA	C	coding	2084	6255	27	6281	55.0	-18	True	NA	NA
PB.8413.9	chr3	+	1745	11	incomplete-splice_match	CEP63	ENST00000332047.9	2056	12	9552	2	1	0	5prime_fragment	FALSE	canonical	1	165024	junction_10	49561.454251161755	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	27	1514	30.0	8849	False	AATAAA	-13
PB.8413.8	chr3	+	2175	14	novel_not_in_catalog	CEP63	novel	2943	16	NA	NA	-539	0	any annotated donor/acceptor	FALSE	canonical	1	720	junction_1	122668.30931268734	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	95	1819	30.0	8309	False	AATAAA	-13
PB.8413.7	chr3	+	2080	12	novel_in_catalog	CEP63	novel	2943	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	30327	junction_1	82403.70393905866	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	362	1849	30.0	-9	True	AATAAA	-13
PB.3779.4	chr15	-	2611	3	incomplete-splice_match	CCDC32	ENST00000358005.7	1704	4	39	2142	1	-1223	3prime_fragment	FALSE	canonical	1	15001	junction_2	130060.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	242	640	20.0	-3	True	ATTAAA	-17
PB.8413.5	chr3	+	2267	13	novel_in_catalog	CEP63	novel	2943	16	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	30327	junction_1	100753.17674092905	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	409	2034	25.0	-56	True	AATAAA	-15
PB.10831.2	chr7	-	3355	23	full-splice_match	TNPO3	ENST00000265388.9	4153	23	-7	805	-7	103	multi-exon	FALSE	canonical	1	351805	junction_19	102957.83144413907	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	152	2923	65.0	-22	True	NA	NA
PB.3779.1	chr15	-	1954	4	full-splice_match	CCDC32	ENST00000358005.7	1704	4	41	-291	0	291	multi-exon	TRUE	canonical	1	15001	junction_3	111694.73082270066	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	240	791	15.0	-1	True	AATAAA	-14
PB.8413.2	chr3	+	2086	12	full-splice_match	CEP63	ENST00000332047.9	2056	12	-32	2	-10	0	multi-exon	FALSE	canonical	1	56658	junction_1	76325.93167516952	NA	2	NA	TRUE	NA	NA	NA	C	coding	495	1488	368	1855	30.0	-29	True	AATAAA	-13
PB.3779.3	chr15	-	1479	4	full-splice_match	CCDC32	ENST00000416810.6	1519	4	43	-3	0	-2	multi-exon	FALSE	canonical	1	218502	junction_1	147857.70149332396	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	52	609	20.0	-4	True	TATAAA	-15
PB.3779.2	chr15	-	1664	4	full-splice_match	CCDC32	ENST00000358005.7	1704	4	38	2	0	-2	multi-exon	FALSE	canonical	1	15001	junction_3	111694.73082270066	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	237	794	20.0	-4	True	TATAAA	-15
PB.11708.11	chr9	-	4512	37	novel_not_in_catalog	ELP1	novel	2840	12	NA	NA	0	-124	any annotated donor/acceptor	FALSE	canonical	1	41638	junction_36	106075.09768224873	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	506	4162	20.0	-30	True	AGTAAA	-11
PB.6687.10	chr2	-	3563	19	incomplete-splice_match	BUB1	ENST00000466333.5	2501	20	-36	5973	-1	730	3prime_fragment	FALSE	canonical	1	297598	junction_17	54981.01709636351	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	70	2472	20.0	-2	True	NA	NA
PB.10952.1	chr7	-	2107	1	full-splice_match	MNX1	ENST00000605400.1	1753	1	314	-668	98	668	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	118	357	1	357	85.0	1684	False	NA	NA
PB.8587.19	chr3	+	1614	10	full-splice_match	EIF4A2	ENST00000426808.5	1751	10	4	133	1	-117	multi-exon	FALSE	canonical	1	824037	junction_3	887244.0997742655	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	181	1119	25.0	-1	True	AATAAA	-16
PB.4328.5	chr16	-	7058	37	full-splice_match	GTF3C1	ENST00000356183.8	7018	37	-20	-20	-13	18	multi-exon	TRUE	canonical	1	202573	junction_36	85868.56893245915	NA	1	NA	TRUE	NA	NA	NA	C	coding	2109	6330	37	6366	20.0	-28	False	ATTAAA	-16
PB.10339.1	chr6	-	3044	3	incomplete-splice_match	WDR27	ENST00000441385.2	683	7	6017	3	-5442	-3	5prime_fragment	FALSE	canonical	1	58557	junction_2	1475.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	120	363	1443	1805	20.0	-1	True	AATATA	-23
PB.7852.6	chr22	+	1947	13	novel_in_catalog	PARVB	novel	1569	14	NA	NA	-341	7	combination_of_known_junctions	FALSE	canonical	1	10929	junction_1	327121.86168726644	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	459	1397	35.0	-16	True	AATAAA	-24
PB.7852.5	chr22	+	1778	13	novel_not_in_catalog	PARVB	novel	1569	14	NA	NA	-366	0	any annotated donor/acceptor	FALSE	canonical	1	7166	junction_1	327686.63204827096	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	252	1235	50.0	-5447	False	AATAAA	-17
PB.7852.4	chr22	+	5289	12	novel_in_catalog	PARVB	novel	1569	14	NA	NA	0	8	intron_retention	FALSE	canonical	1	72528	junction_7	239277.24059735457	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	81	734	40.0	0	True	AATAAA	-25
PB.7852.3	chr22	+	1626	12	novel_in_catalog	PARVB	novel	1569	14	NA	NA	12	-1	no_combination_of_known_junctions	FALSE	canonical	1	1521	junction_8	304340.66920636024	NA	3	1	TRUE	NA	NA	NA	C	coding	288	867	94	960	45.0	-13	True	AATAAA	-16
PB.7852.2	chr22	+	1701	13	full-splice_match	PARVB	ENST00000338758.11	5429	13	0	3728	0	0	multi-exon	FALSE	canonical	1	66602	junction_7	285116.1627692299	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	106	1158	50.0	-25	True	AATAAA	-17
PB.7852.1	chr22	+	1407	13	full-splice_match	PARVB	ENST00000338758.11	5429	13	0	4022	0	0	multi-exon	FALSE	canonical	1	66602	junction_7	285116.1627692299	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	106	1158	10.0	-25	True	NA	NA
PB.11685.1	chr9	+	3266	1	novel_in_catalog	STX17	novel	2713	8	NA	NA	-17	-5443	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.11685.3	chr9	+	2684	8	full-splice_match	STX17	ENST00000259400.10	2713	8	24	5	-14	-5	multi-exon	FALSE	canonical	1	73839	junction_1	41868.7457272786	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	113	1021	20.0	3	True	ATTAAA	-13
PB.11685.2	chr9	+	6889	8	full-splice_match	STX17	ENST00000259400.10	2713	8	22	-4198	-16	4198	multi-exon	FALSE	canonical	1	73839	junction_1	41868.7457272786	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	115	1023	20.0	1	True	NA	NA
PB.11685.5	chr9	+	1870	8	full-splice_match	STX17	ENST00000259400.10	2713	8	42	801	2	0	multi-exon	FALSE	canonical	1	73839	junction_1	41868.7457272786	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	95	1003	85.0	21	True	NA	NA
PB.11685.4	chr9	+	2044	9	novel_in_catalog	STX17	novel	2713	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	2331	junction_1	76977.9083341448	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	269	1177	85.0	9	True	NA	NA
PB.11685.7	chr9	+	2002	9	novel_in_catalog	STX17	novel	2713	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	335	junction_4	76170.99765976795	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	354	1136	80.0	20	True	NA	NA
PB.11685.6	chr9	+	4629	8	full-splice_match	STX17	ENST00000259400.10	2713	8	39	-1955	1	1955	multi-exon	FALSE	canonical	1	73839	junction_1	41868.7457272786	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	98	1006	55.0	18	True	TTTAAA	-44
PB.2687.8	chr12	-	1453	7	full-splice_match	PTGES3	ENST00000414274.7	1547	7	109	-15	-16	15	multi-exon	FALSE	canonical	1	129860	junction_3	294352.23586683616	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	180	572	10.0	-5	True	AATAAA	-15
PB.2687.9	chr12	-	2098	8	novel_in_catalog	PTGES3	novel	2939	8	NA	NA	11	14	combination_of_known_junctions	FALSE	canonical	1	30826	junction_7	228175.90717358788	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	724	1218	10.0	297	False	AATAAA	-14
PB.5690.1	chr19	+	4038	3	full-splice_match	PIN1	ENST00000586025.5	4022	3	-8	-8	0	8	multi-exon	FALSE	canonical	1	878759	junction_2	123908.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	1	501	5.0	-12	True	ATTAAA	-21
PB.5690.3	chr19	+	2882	4	novel_in_catalog	PIN1	novel	517	2	NA	NA	4	0	intron_retention	FALSE	canonical	1	10051	junction_1	478736.17535920086	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1	489	0.0	0	True	ATTAAA	-13
PB.5690.2	chr19	+	2462	4	novel_in_catalog	PIN1	novel	517	2	NA	NA	1	1	intron_retention	FALSE	canonical	1	39361	junction_1	465240.5260982992	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	1	492	5.0	-3	True	ATTAAA	-14
PB.2687.1	chr12	-	1866	8	full-splice_match	PTGES3	ENST00000262033.10	1920	8	45	9	29	-9	multi-exon	FALSE	canonical	1	335885	junction_6	241905.67414062153	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	257	739	30.0	-5	True	AATAAA	-21
PB.2687.2	chr12	-	1725	7	full-splice_match	PTGES3	ENST00000448157.6	1017	7	116	-824	-6	0	multi-exon	FALSE	canonical	1	49541	junction_2	331018.7116683637	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	170	589	20.0	5	True	AATAAA	-30
PB.2687.3	chr12	-	2369	8	novel_in_catalog	PTGES3	novel	2939	8	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	30826	junction_7	228175.90717358788	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	741	1235	20.0	280	False	AATAAA	-28
PB.2687.4	chr12	-	2794	6	novel_in_catalog	PTGES3	novel	2939	8	NA	NA	13	-9	intron_retention	FALSE	canonical	1	395660	junction_2	239061.26509411767	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	134	False	AATAAA	-21
PB.2687.5	chr12	-	1737	7	full-splice_match	PTGES3	ENST00000414274.7	1547	7	71	-261	-54	-9	multi-exon	FALSE	canonical	1	129860	junction_3	294352.23586683616	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	218	610	30.0	7	True	AATAAA	-21
PB.2687.6	chr12	-	1536	8	full-splice_match	PTGES3	ENST00000262033.10	1920	8	125	259	-13	11	multi-exon	FALSE	canonical	1	335885	junction_6	241905.67414062153	NA	17	3	TRUE	NA	NA	NA	C	coding	160	483	177	659	10.0	-2	True	AATAAA	-11
PB.2687.7	chr12	-	1394	6	novel_in_catalog	PTGES3	novel	2939	8	NA	NA	-14	21	no_combination_of_known_junctions	FALSE	canonical	1	16584	junction_2	348003.4146691093	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	178	507	10.0	-3	True	AATAAA	-21
PB.2726.14	chr12	+	4008	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	88	-2441	any annotated donor/acceptor	FALSE	canonical	1	1590	junction_10	211125.90628758376	NA	2	NA	TRUE	NA	NA	NA	C	coding	587	1764	1690	3453	20.0	-23	True	AATAAA	-18
PB.2726.15	chr12	+	4535	24	novel_in_catalog	XPOT	novel	6414	25	NA	NA	101	-1933	intron_retention	FALSE	canonical	1	29892	junction_11	207689.91697562535	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	2156	3472	85.0	-10	True	NA	NA
PB.2726.16	chr12	+	4221	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	102	2091	102	-2091	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	3	1	TRUE	NA	NA	NA	C	coding	962	2889	428	3316	50.0	-9	True	NA	NA
PB.2726.17	chr12	+	3394	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	102	2918	102	-2918	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	428	3316	20.0	-9	True	TATAAA	-24
PB.2726.10	chr12	+	3973	24	novel_in_catalog	XPOT	novel	6414	25	NA	NA	157	-2439	intron_retention	FALSE	canonical	1	29892	junction_11	207689.91697562535	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	2100	3416	25.0	5	True	AATAAA	-20
PB.2726.11	chr12	+	4042	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	54	-2439	any annotated donor/acceptor	FALSE	canonical	1	150	junction_1	211167.45616460507	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	597	3485	25.0	12	True	AATAAA	-20
PB.2726.12	chr12	+	3938	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	78	-2446	any annotated donor/acceptor	FALSE	canonical	1	106	junction_16	211109.70721269638	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	452	2224	25.0	-33	True	AATAAA	-13
PB.2726.13	chr12	+	4069	27	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	84	-2440	any annotated donor/acceptor	TRUE	canonical	1	2783	junction_10	211080.4040527752	NA	3	NA	TRUE	NA	NA	NA	C	coding	647	1944	1570	3513	20.0	-27	True	AATAAA	-19
PB.12205.4	chrX	+	7486	6	novel_in_catalog	FAM199X	novel	7457	6	NA	NA	-166	-8	combination_of_known_junctions	FALSE	canonical	1	27726	junction_5	116960.72309044604	NA	16	1	TRUE	NA	NA	NA	C	coding	345	1038	333	1370	25.0	1	True	AATAAA	-16
PB.12205.5	chrX	+	2551	6	full-splice_match	FAM199X	ENST00000493442.1	7457	6	-147	5053	-147	-597	multi-exon	FALSE	canonical	1	200803	junction_1	54742.58146781169	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	314	1480	30.0	1	True	TATAAA	-33
PB.12205.6	chrX	+	2938	6	full-splice_match	FAM199X	ENST00000493442.1	7457	6	62	4457	62	-1	multi-exon	FALSE	canonical	1	200803	junction_1	54742.58146781169	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	105	1271	20.0	157	False	AATAAA	-23
PB.12205.7	chrX	+	6811	6	full-splice_match	FAM199X	ENST00000493442.1	7457	6	-125	771	-125	-771	multi-exon	FALSE	canonical	1	200803	junction_1	54742.58146781169	NA	3	NA	TRUE	NA	NA	NA	C	coding	388	1167	292	1458	25.0	1	True	ATTAAA	-15
PB.2726.18	chr12	+	4300	24	novel_in_catalog	XPOT	novel	6414	25	NA	NA	111	-1933	no_combination_of_known_junctions	FALSE	canonical	1	14127	junction_4	214096.454477441	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	619	3237	85.0	0	True	NA	NA
PB.12205.1	chrX	+	3778	6	full-splice_match	FAM199X	ENST00000493442.1	7457	6	-148	3827	-148	629	multi-exon	FALSE	canonical	1	200803	junction_1	54742.58146781169	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	315	1481	15.0	0	True	ATTAAA	-16
PB.12205.2	chrX	+	3045	6	novel_in_catalog	FAM199X	novel	7457	6	NA	NA	-175	-2	combination_of_known_junctions	FALSE	canonical	1	27726	junction_5	116960.72309044604	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	342	1379	25.0	-8	True	AATAAA	-22
PB.12205.3	chrX	+	7623	6	full-splice_match	FAM199X	ENST00000493442.1	7457	6	-169	3	-169	-3	multi-exon	FALSE	canonical	1	200803	junction_1	54742.58146781169	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	336	1502	15.0	-2	True	AATAAA	-21
PB.3630.1	chr14	-	2272	2	full-splice_match	MOAP1	ENST00000556883.1	2529	2	250	7	250	-7	multi-exon	FALSE	canonical	1	234593	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	236	1291	35.0	254	False	NA	NA
PB.10103.4	chr6	+	1956	3	novel_not_in_catalog	PNRC1	novel	816	2	NA	NA	0	-326	any annotated donor/acceptor	FALSE	canonical	1	3027	junction_1	16872.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	890	1318	30.0	0	True	TTTAAA	-27
PB.3630.3	chr14	-	2614	2	novel_in_catalog	MOAP1	novel	2441	3	NA	NA	8	-7	intron_retention	FALSE	canonical	1	245044	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	578	1633	35.0	12	False	NA	NA
PB.3630.2	chr14	-	2366	3	full-splice_match	MOAP1	ENST00000298894.4	2441	3	65	10	60	-7	multi-exon	FALSE	canonical	1	234593	junction_1	5225.5	NA	3	1	TRUE	NA	NA	NA	C	coding	351	1056	330	1385	35.0	33	True	NA	NA
PB.9923.9	chr6	-	2805	17	novel_in_catalog	RGL2	novel	2316	15	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	16936	junction_7	188613.94574168182	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	101	2359	10.0	-3	True	AATAAA	-21
PB.9879.3	chr6	-	1170	6	full-splice_match	CLIC1	ENST00000375784.7	1254	6	46	38	24	-36	multi-exon	FALSE	canonical	1	1632775	junction_2	1556304.8063354944	NA	0	NA	TRUE	NA	NA	NA	A	coding	241	726	222	947	75.0	-9	True	NA	NA
PB.3793.1	chr15	+	1785	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	-25	3189	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	145348.57774394457	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.10985.5	chr8	+	1678	8	full-splice_match	FDFT1	ENST00000220584.8	2176	8	157	341	0	1	multi-exon	FALSE	canonical	1	2107054	junction_1	304246.2073588509	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	66	1319	30.0	27	True	ATTAAA	-22
PB.3793.3	chr15	+	1969	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	145348.57774394457	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-18	True	AATAAA	-25
PB.3793.2	chr15	+	1928	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	145348.57774394457	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-19	True	AATAAA	-25
PB.3793.5	chr15	+	1459	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	0	840	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	145348.57774394457	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-3	True	AATAAA	-20
PB.3793.4	chr15	+	2887	6	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	6	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	151675.53290310208	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-12	True	AATAAA	-21
PB.3793.7	chr15	+	1631	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	0	3189	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	145348.57774394457	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-3	True	NA	NA
PB.3793.6	chr15	+	3807	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	0	3188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	145348.57774394457	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-3	True	NA	NA
PB.3793.9	chr15	+	3780	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	0	3190	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	145348.57774394457	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-2	True	NA	NA
PB.3793.8	chr15	+	4263	4	full-splice_match	OIP5-AS1	ENST00000500949.6	8829	4	1	4565	0	3188	multi-exon	FALSE	canonical	1	116738	junction_3	105883.58787628777	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-2	True	NA	NA
PB.8200.6	chr3	+	2607	15	full-splice_match	PXK	ENST00000468776.5	1653	15	7	-961	2	0	multi-exon	FALSE	canonical	1	6103	junction_1	123694.72301185525	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	223	1548	25.0	-45	True	ATTAAA	-12
PB.470.20	chr1	+	4608	5	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-10	2	intron_retention	FALSE	canonical	1	826266	junction_2	143228.53045984762	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	402	4206	4607	40.0	-21	True	NA	NA
PB.1199.8	chr1	-	4033	6	novel_not_in_catalog	EGLN1	novel	7097	5	NA	NA	-1972	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	226220.54511772355	NA	3	1	TRUE	NA	NA	NA	C	coding	426	1281	101	1381	30.0	8024	False	ATTAAA	-21
PB.1900.1	chr11	-	2630	1	antisense	novelGene_RAG1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	338	1017	906	1922	65.0	NA	False	NA	NA
PB.8206.4	chr3	+	2281	1	incomplete-splice_match	PTPRG	ENST00000474889.5	9021	30	733416	6	51522	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1339	False	AATAAA	-16
PB.8206.1	chr3	+	4522	26	novel_not_in_catalog	PTPRG	novel	4650	29	NA	NA	-214158	470	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	47118.390536451894	NA	1	NA	TRUE	NA	NA	NA	B	coding	1244	3735	74	3808	25.0	NA	False	AATAAA	-29
PB.627.11	chr1	-	3466	18	novel_in_catalog	PTPN22	novel	1794	8	NA	NA	8	1	no_combination_of_known_junctions	FALSE	canonical	1	679	junction_14	34857.66314411384	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	123	2375	20.0	-34	True	AATAAA	-18
PB.627.10	chr1	-	3481	20	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	8	1	any annotated donor/acceptor	FALSE	canonical	1	3478	junction_15	42019.17709003949	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	123	2390	20.0	-34	True	AATAAA	-18
PB.627.13	chr1	-	3633	21	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	38501.964985536775	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	90	2546	35.0	-1	True	AATAAA	-14
PB.627.12	chr1	-	3528	20	novel_in_catalog	PTPN22	novel	1794	8	NA	NA	-5	-2	no_combination_of_known_junctions	FALSE	canonical	1	4836	junction_11	38514.4813561466	NA	11	1	TRUE	NA	NA	NA	C	coding	781	2346	95	2440	30.0	-6	True	AATAAA	-15
PB.627.14	chr1	-	3389	19	novel_in_catalog	PTPN22	novel	1794	8	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	1661	junction_12	37761.721322289086	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	90	2303	30.0	-1	True	AATAAA	-13
PB.627.17	chr1	-	2899	21	full-splice_match	PTPN22	ENST00000359785.9	3654	21	6	749	0	104	multi-exon	FALSE	canonical	1	56189	junction_14	29933.182013402784	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	131	2554	40.0	-42	True	CATAAA	-22
PB.627.16	chr1	-	3101	21	full-splice_match	PTPN22	ENST00000359785.9	3654	21	14	539	8	314	multi-exon	FALSE	canonical	1	56189	junction_14	29933.182013402784	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	123	2546	55.0	-34	True	AAGAAA	-22
PB.627.19	chr1	-	2706	20	novel_in_catalog	PTPN22	novel	1794	8	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	4836	junction_11	38514.4813561466	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	131	2476	35.0	-42	True	AATAAA	-18
PB.627.18	chr1	-	2752	21	full-splice_match	PTPN22	ENST00000359785.9	3654	21	39	863	-8	5	multi-exon	FALSE	canonical	1	56189	junction_14	29933.182013402784	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	98	2521	40.0	-9	True	AATAAA	-19
PB.10103.2	chr6	+	1701	3	novel_not_in_catalog	PNRC1	novel	816	2	NA	NA	-3	-327	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	307920.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	636	1064	30.0	-3	True	TTTAAA	-26
PB.7365.2	chr20	-	2684	11	novel_not_in_catalog	BCAS1	novel	6112	9	NA	NA	11525	-437	any annotated donor/acceptor	FALSE	canonical	1	7758	junction_10	124968.47483381558	NA	1	NA	TRUE	NA	NA	NA	B	coding	558	1677	64	1740	90.0	-1	True	AAAACA	-43
PB.352.1	chr1	-	2166	7	novel_in_catalog	HYI	novel	1265	8	NA	NA	-10	0	intron_retention	FALSE	canonical	1	247389	junction_6	179566.8188474697	NA	1	NA	TRUE	NA	NA	NA	A	coding	180	543	1474	2016	25.0	-91	True	ATTAAA	-13
PB.9054.1	chr4	+	2940	15	full-splice_match	KLHL2	ENST00000226725.10	3134	15	186	8	-19	-8	multi-exon	FALSE	canonical	1	11770	junction_3	76027.98856436265	NA	0	NA	TRUE	NA	NA	NA	A	coding	593	1782	74	1855	15.0	118	False	AATAAA	-12
PB.11929.6	chr9	-	3049	9	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	5756	junction_1	113784.16585552446	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	145	1116	55.0	-22	True	ATTAAA	-13
PB.9923.5	chr6	-	2978	17	novel_not_in_catalog	RGL2	novel	2316	15	NA	NA	-35	-1	intron_retention	FALSE	canonical	1	37921	junction_7	187877.35091509833	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	138	1427	15.0	6331	False	AATAAA	-22
PB.8167.2	chr3	+	2080	10	full-splice_match	PHF7	ENST00000347025.6	1472	10	-608	0	-68	0	multi-exon	FALSE	canonical	1	15484	junction_8	49594.98600553174	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	729	1757	25.0	-35	True	AATAAA	-13
PB.8167.1	chr3	+	2200	10	novel_in_catalog	PHF7	novel	2130	11	NA	NA	-96	0	intron_retention	FALSE	canonical	1	15484	junction_8	51651.56825843292	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	849	1877	25.0	-63	True	AATAAA	-13
PB.10103.1	chr6	+	1769	2	full-splice_match	PNRC1	ENST00000336032.3	2065	2	-30	326	-3	-326	multi-exon	FALSE	canonical	1	615841	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	247	1131	30.0	-3	True	TTTAAA	-27
PB.5912.13	chr19	+	2115	10	full-splice_match	LSM14A	ENST00000544216.7	3596	10	58	1423	-34	-4	multi-exon	FALSE	canonical	1	253280	junction_7	393897.2544399846	NA	4	NA	TRUE	NA	NA	NA	C	coding	463	1392	20	1411	25.0	-89	False	AATAAA	-15
PB.4185.3	chr16	+	2376	7	novel_not_in_catalog	KCTD5	novel	2482	6	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	155775.00157991404	NA	9	NA	TRUE	NA	NA	NA	C	coding	64	195	481	675	20.0	0	True	AATAAA	-15
PB.4185.2	chr16	+	2169	6	full-splice_match	KCTD5	ENST00000301738.8	2482	6	309	4	244	-4	multi-exon	FALSE	canonical	1	312926	junction_2	47300.77257889135	NA	0	NA	TRUE	NA	NA	NA	C	coding	64	195	276	470	20.0	260	False	AATAAA	-13
PB.4185.1	chr16	+	2243	1	full-splice_match	AC092117.2	ENST00000623937.1	1659	1	-584	0	-584	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	181	546	28	573	95.0	-2	True	NA	NA
PB.625.14	chr1	-	2649	13	novel_not_in_catalog	PHTF1	novel	4314	12	NA	NA	3	-1	intron_retention	FALSE	canonical	1	21256	junction_10	64592.657178306006	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	981	2582	20.0	12	True	AATAAA	-15
PB.9448.1	chr5	+	2120	1	antisense	novelGene_C5orf15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.625.11	chr1	-	3182	16	novel_in_catalog	PHTF1	novel	4314	12	NA	NA	3	-392	combination_of_known_junctions	FALSE	canonical	1	20637	junction_15	51106.195125922735	NA	4	NA	TRUE	NA	NA	NA	C	coding	691	2076	610	2685	0.0	-1	True	AATAAA	-16
PB.4185.4	chr16	+	2288	6	full-splice_match	KCTD5	ENST00000301738.8	2482	6	49	145	-4	-145	multi-exon	FALSE	canonical	1	312926	junction_2	47300.77257889135	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	26	730	50.0	0	True	NA	NA
PB.10086.3	chr6	+	2094	16	full-splice_match	CYB5R4	ENST00000369681.9	9252	16	27	7131	14	4918	multi-exon	FALSE	canonical	1	189308	junction_1	39918.79703576026	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	114	1679	30.0	-19	True	ATTAAA	-26
PB.10086.2	chr6	+	2425	17	novel_not_in_catalog	CYB5R4	novel	9252	16	NA	NA	11	5050	any annotated donor/acceptor	FALSE	canonical	1	21075	junction_10	81260.28970322678	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	117	1046	30.0	-22	True	AATAAA	-21
PB.10086.1	chr6	+	2543	14	incomplete-splice_match	CYB5R4	ENST00000369681.9	9252	16	14	25752	1	-13703	3prime_fragment	FALSE	canonical	1	189308	junction_1	39141.80771511582	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	127	1479	45.0	-32	True	AATAAA	-9
PB.10086.6	chr6	+	2369	16	novel_not_in_catalog	CYB5R4	novel	9252	16	NA	NA	34	5050	any annotated donor/acceptor	FALSE	canonical	1	224	junction_8	98569.09042390295	NA	1	1	TRUE	NA	NA	NA	C	coding	298	897	94	990	30.0	1	True	AATAAA	-21
PB.10086.5	chr6	+	2212	16	full-splice_match	CYB5R4	ENST00000369681.9	9252	16	40	7000	27	5049	multi-exon	FALSE	canonical	1	189308	junction_1	39918.79703576026	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	101	1666	30.0	-6	True	AATAAA	-20
PB.10086.4	chr6	+	2193	15	novel_in_catalog	CYB5R4	novel	9252	16	NA	NA	15	5051	no_combination_of_known_junctions	FALSE	canonical	1	224	junction_8	74064.8220073443	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	113	1645	25.0	-18	True	AATAAA	-22
PB.8520.12	chr3	+	3935	26	full-splice_match	FNDC3B	ENST00000336824.8	7904	26	-21	3990	-21	194	multi-exon	FALSE	canonical	1	64121	junction_1	85473.48032023967	NA	0	NA	TRUE	NA	NA	NA	C	coding	1200	3603	133	3735	85.0	2	True	NA	NA
PB.7244.3	chr20	+	3210	14	novel_in_catalog	ZNF341	novel	3661	15	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	390	junction_12	10226.061032317692	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	27	1904	10.0	0	True	NA	NA
PB.8954.6	chr4	-	3883	23	novel_not_in_catalog	SEC24D	novel	4030	23	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	2166	junction_22	118541.36348573797	NA	1	1	TRUE	NA	NA	NA	C	coding	1032	3099	94	3192	30.0	-17	True	AATAAA	-18
PB.10758.1	chr7	+	1549	7	full-splice_match	ARMC10	ENST00000323716.7	2635	7	3	1083	3	-2	multi-exon	FALSE	canonical	1	32515	junction_3	293100.62439283927	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	390	1421	20.0	3	True	AGTAAA	-29
PB.777.6	chr1	+	3824	27	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-13	-59	combination_of_known_junctions	FALSE	canonical	1	56682	junction_26	376152.41092229926	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	90	3293	80.0	-28	True	NA	NA
PB.10758.3	chr7	+	2264	6	full-splice_match	ARMC10	ENST00000441711.6	2524	6	274	-14	-13	8	multi-exon	FALSE	canonical	1	12980	junction_1	324221.0667673524	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	119	1045	25.0	-13	True	AATAAA	-28
PB.10758.2	chr7	+	2371	7	full-splice_match	ARMC10	ENST00000323716.7	2635	7	262	2	-25	-2	multi-exon	FALSE	canonical	1	32515	junction_3	293100.62439283927	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	131	1162	35.0	-25	True	AATAAA	-18
PB.10758.5	chr7	+	2414	8	novel_not_in_catalog	ARMC10	novel	2266	4	NA	NA	-35	3134	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	286858.9653763248	NA	1	1	TRUE	NA	NA	NA	C	coding	343	1032	141	1172	45.0	-35	True	AATAAA	-19
PB.10758.4	chr7	+	2319	7	novel_not_in_catalog	ARMC10	novel	2266	4	NA	NA	-38	3143	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	313830.17545875383	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	144	1070	45.0	-38	True	AATAAA	-28
PB.10758.7	chr7	+	1420	6	full-splice_match	ARMC10	ENST00000441711.6	2524	6	259	845	-28	-1	multi-exon	FALSE	canonical	1	12980	junction_1	324221.0667673524	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	134	1060	25.0	-28	True	ACTAAA	-12
PB.10758.6	chr7	+	2403	7	novel_not_in_catalog	ARMC10	novel	2266	4	NA	NA	-33	-2	any annotated donor/acceptor	FALSE	canonical	1	153	junction_1	303850.78664283926	NA	3	1	TRUE	NA	NA	NA	C	coding	351	1056	139	1194	35.0	-33	True	AATAAA	-18
PB.10758.9	chr7	+	2351	7	novel_not_in_catalog	ARMC10	novel	2266	4	NA	NA	-19	-2	any annotated donor/acceptor	FALSE	canonical	1	974	junction_3	316954.1456611753	NA	7	1	TRUE	NA	NA	NA	C	coding	153	462	125	586	35.0	-19	True	AATAAA	-18
PB.10758.8	chr7	+	2186	5	full-splice_match	ARMC10	ENST00000425331.5	2443	5	259	-2	-28	0	multi-exon	FALSE	canonical	1	517	junction_4	14285.871245744867	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	134	988	50.0	-28	True	AATAAA	-7
PB.777.9	chr1	+	3403	25	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-1	-3	no_combination_of_known_junctions	FALSE	canonical	1	5239	junction_20	368384.6736397498	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	74	2563	10.0	-12	True	AATAAA	-20
PB.777.8	chr1	+	3839	28	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-2	119	combination_of_known_junctions	FALSE	canonical	1	90703	junction_27	411030.2189102025	NA	0	NA	TRUE	NA	NA	NA	C	coding	1103	3312	140	3451	75.0	-13	True	NA	NA
PB.10064.7	chr6	+	3790	24	novel_not_in_catalog	CD109	novel	9221	32	NA	NA	98	-5978	any annotated donor/acceptor	FALSE	canonical	1	825	junction_23	57361.84904459361	NA	1	NA	TRUE	NA	NA	NA	C	coding	976	2931	15	2945	10.0	-1	True	NA	NA
PB.10064.6	chr6	+	4803	34	novel_not_in_catalog	CD109	novel	9221	32	NA	NA	66	-4384	any annotated donor/acceptor	FALSE	canonical	1	368	junction_3	65458.484209578295	NA	0	NA	TRUE	NA	NA	NA	C	coding	1486	4461	47	4507	25.0	-33	True	AATAAA	-14
PB.10064.5	chr6	+	4379	33	full-splice_match	CD109	ENST00000287097.5	9130	33	99	4652	99	-4652	multi-exon	FALSE	canonical	1	134945	junction_29	43629.5267421742	NA	0	NA	TRUE	NA	NA	NA	C	coding	1445	4338	14	4351	35.0	0	True	TTTAAA	-17
PB.10064.4	chr6	+	5772	33	full-splice_match	CD109	ENST00000287097.5	9130	33	82	3276	82	-3276	multi-exon	FALSE	canonical	1	134945	junction_29	43629.5267421742	NA	0	NA	TRUE	NA	NA	NA	C	coding	1445	4338	31	4368	60.0	-17	True	AATAAA	-7
PB.10064.3	chr6	+	6564	33	full-splice_match	CD109	ENST00000287097.5	9130	33	68	2498	68	-2498	multi-exon	FALSE	canonical	1	134945	junction_29	43629.5267421742	NA	0	NA	TRUE	NA	NA	NA	C	coding	1445	4338	45	4382	60.0	-31	True	NA	NA
PB.10064.2	chr6	+	9073	33	full-splice_match	CD109	ENST00000287097.5	9130	33	56	1	56	-1	multi-exon	FALSE	canonical	1	134945	junction_29	43629.5267421742	NA	6	NA	TRUE	NA	NA	NA	C	coding	1445	4338	57	4394	15.0	-43	True	AATAAA	-18
PB.10064.1	chr6	+	4666	33	full-splice_match	CD109	ENST00000287097.5	9130	33	84	4380	84	-4380	multi-exon	FALSE	canonical	1	134945	junction_29	43629.5267421742	NA	2	NA	TRUE	NA	NA	NA	C	coding	1445	4338	29	4366	10.0	-15	True	AATAAA	-18
PB.8387.8	chr3	-	1520	5	full-splice_match	CNBP	ENST00000502976.5	1626	5	12	94	3	-9	multi-exon	FALSE	canonical	1	2319649	junction_3	1329834.6763719118	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	133	645	25.0	2	True	AATAAA	-18
PB.8387.7	chr3	-	1549	5	full-splice_match	CNBP	ENST00000422453.6	1664	5	30	85	4	0	multi-exon	FALSE	canonical	1	2462385	junction_3	1291753.2303652999	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	132	665	15.0	3	True	AATAAA	-27
PB.8387.6	chr3	-	2470	5	novel_not_in_catalog	CNBP	novel	1626	5	NA	NA	2	853	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1913756.4662940234	NA	3	NA	TRUE	NA	NA	NA	C	coding	128	387	134	520	0.0	1	True	NA	NA
PB.8387.5	chr3	-	2552	5	full-splice_match	CNBP	ENST00000422453.6	1664	5	1	-889	1	889	multi-exon	FALSE	canonical	1	2462385	junction_3	1291753.2303652999	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	161	694	15.0	0	True	NA	NA
PB.2983.4	chr12	-	2477	12	novel_in_catalog	ZCCHC8	novel	5663	12	NA	NA	82	-226	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_11	107805.3922755534	NA	3	NA	TRUE	NA	NA	NA	C	coding	464	1395	711	2105	60.0	-21	True	AATATA	-10
PB.2983.3	chr12	-	2633	14	full-splice_match	ZCCHC8	ENST00000633063.1	2955	14	96	226	96	-226	multi-exon	FALSE	non_canonical	0	0	junction_13	87683.68123973513	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	138	2261	60.0	-7	True	AATATA	-10
PB.2983.2	chr12	-	2751	14	full-splice_match	ZCCHC8	ENST00000633063.1	2955	14	208	-4	208	-2	multi-exon	TRUE	non_canonical	0	0	junction_13	87683.68123973513	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	26	2149	45.0	-15	True	AATAAA	-18
PB.2983.1	chr12	-	2705	12	novel_in_catalog	ZCCHC8	novel	5663	12	NA	NA	85	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_11	107805.3922755534	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	708	2102	45.0	-18	True	AATAAA	-19
PB.6844.1	chr2	+	2478	9	full-splice_match	CDCA7	ENST00000347703.7	2500	9	20	2	20	-2	multi-exon	FALSE	canonical	1	184346	junction_1	132025.52600769812	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	125	1240	25.0	-45	True	AATAAA	-12
PB.8052.1	chr3	+	4351	3	intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6891	junction_1	1024.5	NA	1	NA	FALSE	NA	NA	NA	A	coding	126	381	1955	2335	95.0	0	True	NA	NA
PB.6844.3	chr2	+	2715	10	full-splice_match	CDCA7	ENST00000306721.7	2789	10	-21	95	20	-2	multi-exon	FALSE	canonical	1	53771	junction_3	176184.125017684	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	125	1477	25.0	-45	True	AATAAA	-12
PB.11647.23	chr9	-	1825	8	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	-2	41	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70039.97827858962	NA	2	NA	TRUE	NA	NA	NA	B	coding	301	903	922	1824	70.0	-14	True	ATTAAA	-5
PB.6844.2	chr2	+	3435	8	full-splice_match	CDCA7	ENST00000496441.5	2943	8	1	-493	1	-4	multi-exon	FALSE	canonical	1	184346	junction_1	138799.3907488246	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	1576	2106	25.0	-12	True	AATAAA	-23
PB.11391.9	chr8	+	2482	9	novel_not_in_catalog	GPAA1	novel	878	6	NA	NA	8	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	413869.19596321054	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	1722	2393	10.0	0	True	AATAAA	-21
PB.4191.4	chr16	+	2198	8	full-splice_match	KREMEN2	ENST00000575769.1	1922	8	-246	-30	0	-1	multi-exon	FALSE	canonical	1	17096	junction_7	11779.749934977917	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	247	1521	20.0	0	True	AATAAA	-14
PB.4191.5	chr16	+	2185	8	novel_in_catalog	KREMEN2	novel	2326	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	17096	junction_6	12341.779228725989	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	247	759	20.0	0	True	AATAAA	-14
PB.6905.2	chr2	+	4442	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	-8	-39	combination_of_known_junctions	FALSE	canonical	1	35200	junction_1	74319.8387745306	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	211	2586	40.0	-8	True	AATAAA	-16
PB.11391.8	chr8	+	1879	11	full-splice_match	GPAA1	ENST00000361036.10	1840	11	-40	1	2	-1	multi-exon	FALSE	canonical	1	11971	junction_1	350098.18394010555	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	104	1789	10.0	-6	True	AATAAA	-22
PB.9356.21	chr5	-	2133	13	incomplete-splice_match	ERAP1	ENST00000443439.6	4805	19	-30	11211	-17	-56	3prime_fragment	FALSE	canonical	1	248175	junction_12	38390.217202487496	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	134	2044	45.0	5	True	NA	NA
PB.4191.1	chr16	+	2142	9	full-splice_match	KREMEN2	ENST00000303746.9	2326	9	182	2	-90	-1	multi-exon	FALSE	canonical	1	17096	junction_7	11593.45902262888	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	396	1784	20.0	-5427	False	AATAAA	-14
PB.4191.2	chr16	+	2622	5	novel_in_catalog	KREMEN2	novel	2326	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	30347	junction_2	8342.069778388335	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	305	673	20.0	-5336	False	AATAAA	-15
PB.4191.3	chr16	+	2279	7	full-splice_match	KREMEN2	ENST00000572045.5	2339	7	59	1	0	0	multi-exon	FALSE	canonical	1	30347	junction_2	8510.580760963901	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	247	1446	20.0	0	True	AATAAA	-15
PB.1538.8	chr10	+	6100	38	novel_in_catalog	BTAF1	novel	7250	38	NA	NA	10	-1264	combination_of_known_junctions	FALSE	canonical	1	166231	junction_1	73619.67856657236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1519	4560	1417	5976	15.0	-16	True	AATAGA	-19
PB.1538.9	chr10	+	3184	20	novel_in_catalog	BTAF1	novel	7250	38	NA	NA	29	108	combination_of_known_junctions	FALSE	canonical	1	166231	junction_1	61156.04764848183	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1785	1398	3182	20.0	3	True	ATTAAA	-15
PB.11158.1	chr8	-	7535	6	full-splice_match	CYP7B1	ENST00000310193.3	2202	6	-48	-5285	-48	-3087	multi-exon	FALSE	canonical	1	28093	junction_5	18554.74894467721	NA	3	NA	TRUE	NA	NA	NA	C	coding	506	1521	223	1743	20.0	-33	False	AATAAA	-18
PB.1538.4	chr10	+	8046	38	novel_in_catalog	BTAF1	novel	7250	38	NA	NA	4	672	combination_of_known_junctions	FALSE	canonical	1	166231	junction_1	73619.67856657236	NA	1	NA	TRUE	NA	NA	NA	C	coding	1519	4560	1423	5982	25.0	-22	True	ATTAAA	-18
PB.1538.6	chr10	+	3632	2	incomplete-splice_match	BTAF1	ENST00000265990.10	7250	38	9	91350	9	-43440	3prime_fragment	FALSE	canonical	1	166231	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-17	True	NA	NA
PB.1538.7	chr10	+	7101	36	novel_in_catalog	BTAF1	novel	7250	38	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	3324	junction_2	88019.19868169763	NA	1	NA	TRUE	NA	NA	NA	C	coding	1519	4560	1155	5714	40.0	-16	True	AATAAA	-17
PB.1538.1	chr10	+	7348	38	novel_in_catalog	BTAF1	novel	7250	38	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	166231	junction_1	73619.67856657236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1519	4560	1401	5960	40.0	0	True	AATAAA	-18
PB.1538.2	chr10	+	7215	38	full-splice_match	BTAF1	ENST00000265990.10	7250	38	23	12	23	-8	multi-exon	FALSE	canonical	1	165024	junction_9	76523.61398222072	NA	2	NA	TRUE	NA	NA	NA	C	coding	1849	5550	286	5835	50.0	-3	True	AATAAA	-10
PB.1538.3	chr10	+	7488	39	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	3684	junction_4	101993.51982598584	NA	28	4	TRUE	NA	NA	NA	C	coding	1519	4560	1542	6101	40.0	-25	True	AATAAA	-17
PB.10305.2	chr6	+	1683	1	incomplete-splice_match	TULP4	ENST00000367097.7	11295	14	197652	6	48490	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-1266	False	AATAAA	-13
PB.10305.1	chr6	+	3930	1	incomplete-splice_match	TULP4	ENST00000367097.7	11295	14	195406	5	46244	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-3512	False	AATAAA	-14
PB.1699.1	chr10	-	4720	8	novel_not_in_catalog	CHST15	novel	4820	8	NA	NA	-303	-7	any annotated donor/acceptor	FALSE	canonical	1	5209	junction_7	62925.62906888008	NA	0	NA	TRUE	NA	NA	NA	A	coding	469	1410	837	2246	15.0	932	False	NA	NA
PB.12178.1	chrX	+	2179	11	full-splice_match	SRPX2	ENST00000373004.4	6679	11	9	4491	9	153	multi-exon	FALSE	canonical	1	87010	junction_3	21839.34271446831	NA	0	NA	TRUE	NA	NA	NA	A	coding	465	1398	472	1869	20.0	-231	False	AGTAAA	-18
PB.11158.5	chr8	-	1712	6	full-splice_match	CYP7B1	ENST00000310193.3	2202	6	25	465	25	-465	multi-exon	FALSE	canonical	1	28093	junction_5	18554.74894467721	NA	1	NA	TRUE	NA	NA	NA	C	coding	506	1521	150	1670	40.0	0	True	AATAAA	-18
PB.2203.1	chr11	+	2893	4	novel_in_catalog	TMEM126A	novel	726	5	NA	NA	0	8	intron_retention	FALSE	canonical	1	503164	junction_1	107347.61568640245	NA	1	1	TRUE	NA	NA	NA	A	coding	195	588	2290	2877	70.0	0	True	AAGAAA	-25
PB.1261.11	chr10	+	3601	14	full-splice_match	ZMYND11	ENST00000381607.8	3898	14	29	268	4	-268	multi-exon	FALSE	canonical	1	112905	junction_3	175189.88060819838	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	67	1713	85.0	-6	False	NA	NA
PB.1261.10	chr10	+	4042	15	novel_in_catalog	ZMYND11	novel	762	5	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	114796	junction_1	148700.63752035223	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	79	1887	50.0	-2	True	AATAAA	-7
PB.1261.12	chr10	+	2870	2	novel_not_in_catalog	ZMYND11	novel	762	5	NA	NA	6	-84309	any annotated donor/acceptor	FALSE	canonical	1	1765	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	996	1652	20.0	-4	True	NA	NA
PB.4753.11	chr17	+	2404	13	incomplete-splice_match	CHD3	ENST00000470531.5	3744	17	2006	555	-1585	390	5prime_fragment	FALSE	canonical	1	114505	junction_6	257559.14033560653	NA	0	NA	TRUE	NA	NA	NA	B	coding	577	1734	51	1784	10.0	-4247	False	AATAAA	-25
PB.8885.9	chr4	+	5102	24	full-splice_match	SMARCAD1	ENST00000457823.6	4649	24	16	-469	-5	0	multi-exon	FALSE	canonical	1	87000	junction_1	72993.74402175708	NA	2	NA	TRUE	NA	NA	NA	C	coding	1028	3087	260	3346	25.0	-4	True	AATAAA	-16
PB.11293.9	chr8	-	3991	6	full-splice_match	LRP12	ENST00000424843.6	4092	6	-28	129	-28	-104	multi-exon	FALSE	canonical	1	35820	junction_5	41711.722541271294	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	156	2678	30.0	205	False	ATTAAA	-29
PB.11508.6	chr9	-	3554	8	novel_in_catalog	DCAF12	novel	3667	9	NA	NA	45	-2	no_combination_of_known_junctions	FALSE	canonical	1	3350	junction_3	325507.85171545116	NA	3	NA	TRUE	NA	NA	NA	C	coding	431	1296	298	1593	30.0	9	False	AATAAA	-14
PB.2956.15	chr12	+	2952	16	novel_in_catalog	RNF10	novel	321	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	14736	junction_12	495899.61486470216	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	457	2736	30.0	0	True	AATAAA	-11
PB.2786.1	chr12	+	1340	4	full-splice_match	ALX1	ENST00000316824.3	1445	4	98	7	98	-7	multi-exon	FALSE	canonical	1	17286	junction_1	2951.293388781716	NA	0	NA	TRUE	NA	NA	NA	A	coding	326	981	58	1038	40.0	-15	True	AATAAA	-7
PB.2956.17	chr12	+	3293	16	novel_in_catalog	RNF10	novel	321	2	NA	NA	1	-78	intron_retention	FALSE	canonical	1	101863	junction_13	482092.3695038074	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2103	456	2558	20.0	1	True	AATAAA	-17
PB.2213.4	chr11	-	3271	5	incomplete-splice_match	CTSC	ENST00000227266.9	1921	7	51	4488	0	-1921	3prime_fragment	FALSE	canonical	1	1082009	junction_3	153022.44050199795	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	65	910	65.0	-1	True	NA	NA
PB.2956.11	chr12	+	2607	17	full-splice_match	RNF10	ENST00000325954.8	3825	17	506	712	3	0	multi-exon	FALSE	canonical	1	593763	junction_1	357248.63204756903	NA	1	NA	TRUE	NA	NA	NA	C	coding	717	2154	238	2391	30.0	20	False	AATAAA	-11
PB.2956.10	chr12	+	2910	16	novel_in_catalog	RNF10	novel	321	2	NA	NA	-2	0	intron_retention	FALSE	canonical	1	15520	junction_2	472321.72893510724	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	1138	2694	30.0	-2	True	AATAAA	-11
PB.2956.13	chr12	+	3178	18	novel_in_catalog	RNF10	novel	321	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	14441	junction_14	550092.2136860894	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	457	2634	30.0	0	True	AATAAA	-11
PB.2956.12	chr12	+	3128	17	full-splice_match	RNF10	ENST00000413266.6	2671	17	-456	-1	0	1	multi-exon	FALSE	canonical	1	221248	junction_8	437418.02540560026	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	457	2907	15.0	0	True	AATAAA	-16
PB.11604.4	chr9	-	5513	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	24	-2851	-14	-182	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	526	1167	85.0	-4	True	AATAAA	-18
PB.8143.1	chr3	-	2094	1	antisense	novelGene_DOCK3_AS_novelGene_MANF_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-47	False	NA	NA
PB.3243.2	chr13	-	2830	1	intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	NA	NA
PB.3243.1	chr13	-	3493	1	full-splice_match	AL158063.1	ENST00000615349.1	536	1	-2957	0	-2957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-15
PB.2213.8	chr11	-	4803	4	full-splice_match	CTSC	ENST00000524463.5	6125	4	24	1298	-1	-1298	multi-exon	FALSE	canonical	1	856131	junction_1	228596.47899640878	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	66	479	50.0	-2	True	NA	NA
PB.7065.12	chr2	+	2255	12	novel_not_in_catalog	ARMC9	novel	2300	21	NA	NA	54	-16634	any annotated donor/acceptor	FALSE	canonical	1	5530	junction_11	49407.71595678266	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	287	1339	15.0	-4444	False	NA	NA
PB.9590.13	chr5	+	4277	31	novel_in_catalog	CYFIP2	novel	4210	32	NA	NA	126	0	combination_of_known_junctions	FALSE	canonical	1	396	junction_4	187691.39861741132	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	309	4070	90.0	-3970	False	CATAAA	-3
PB.9590.14	chr5	+	4264	31	full-splice_match	CYFIP2	ENST00000618329.4	4256	31	-30	22	-30	0	multi-exon	FALSE	canonical	1	396	junction_4	193864.90976176914	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	296	4057	90.0	2	True	CATAAA	-3
PB.11293.1	chr8	-	4790	6	full-splice_match	LRP12	ENST00000424843.6	4092	6	9	-707	-6	707	multi-exon	FALSE	canonical	1	35820	junction_5	41711.722541271294	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	119	2641	10.0	-6	True	ATTAAA	-17
PB.11604.5	chr9	-	3200	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	-19	-396	-19	396	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	668	1309	10.0	-9	True	AATACA	-17
PB.9096.2	chr4	-	2775	5	novel_in_catalog	CFAP97	novel	4852	5	NA	NA	8	-2146	intron_retention	FALSE	canonical	1	23391	junction_4	139898.7987457362	NA	4	NA	TRUE	NA	NA	NA	C	coding	532	1599	190	1788	65.0	34	True	ACTAAA	-6
PB.10391.4	chr7	-	6834	12	novel_in_catalog	CYTH3	novel	4505	13	NA	NA	2	-7	intron_retention	FALSE	canonical	1	62791	junction_11	79505.24209828832	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	2978	3673	45.0	-33	True	AATAAA	-17
PB.10391.7	chr7	-	5129	14	novel_not_in_catalog	CYTH3	novel	4505	13	NA	NA	12	-7	any annotated donor/acceptor	FALSE	canonical	1	565	junction_8	111357.58704383305	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	1024	1968	45.0	-23	True	AATAAA	-17
PB.10391.2	chr7	-	4484	13	full-splice_match	CYTH3	ENST00000350796.7	4505	13	14	7	14	-7	multi-exon	FALSE	canonical	1	62791	junction_12	76254.79549328175	NA	49	2	TRUE	NA	NA	NA	C	coding	399	1200	124	1323	45.0	-21	True	AATAAA	-17
PB.10391.3	chr7	-	4337	12	novel_in_catalog	CYTH3	novel	4505	13	NA	NA	12	-7	no_combination_of_known_junctions	FALSE	canonical	1	2231	junction_5	96005.02867924409	NA	1	1	TRUE	NA	NA	NA	C	coding	190	573	126	698	45.0	-23	True	AATAAA	-17
PB.10391.8	chr7	-	4750	13	novel_not_in_catalog	CYTH3	novel	4505	13	NA	NA	15725	-8	any annotated donor/acceptor	FALSE	canonical	1	367	junction_12	88878.5588976454	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	535	1590	45.0	4768	False	AATAAA	-16
PB.10391.9	chr7	-	4400	13	novel_not_in_catalog	CYTH3	novel	4505	13	NA	NA	14835	-8	any annotated donor/acceptor	FALSE	canonical	1	2217	junction_12	88481.96728037616	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	185	1240	45.0	3878	False	AATAAA	-16
PB.7697.2	chr22	-	1934	9	full-splice_match	TBC1D10A	ENST00000215790.11	2077	9	143	0	-2	0	multi-exon	FALSE	canonical	1	160978	junction_7	36801.8965917519	NA	0	NA	TRUE	NA	NA	NA	A	coding	508	1527	23	1549	15.0	-3	True	AATAAA	-17
PB.6905.9	chr2	+	2971	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	1	-38	no_combination_of_known_junctions	FALSE	canonical	1	45	junction_2	106383.0705735958	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	353	1114	45.0	1	True	AATAAA	-17
PB.11604.6	chr9	-	2685	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	333	-332	74	332	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	355	858	40.0	6449	False	AAGAAA	-19
PB.7353.14	chr20	+	4026	9	novel_in_catalog	PTPN1	novel	3469	9	NA	NA	29	-10	intron_retention	FALSE	canonical	1	448737	junction_8	83540.28585873629	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	1386	1991	40.0	0	True	AATAAA	-11
PB.6608.3	chr2	-	2002	5	full-splice_match	CHMP3	ENST00000409225.2	1099	5	13	-916	11	0	multi-exon	FALSE	canonical	1	61928	junction_4	470734.67722778826	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	256	726	100.0	-4	True	NA	NA
PB.6608.2	chr2	-	2040	6	full-splice_match	CHMP3	ENST00000263856.8	3171	6	34	1097	-3	0	multi-exon	FALSE	canonical	1	879436	junction_3	173425.13294214307	NA	4	NA	TRUE	NA	NA	NA	C	coding	222	669	96	764	100.0	35	False	NA	NA
PB.6608.1	chr2	-	2464	7	novel_not_in_catalog	CHMP3	novel	3171	6	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	694	junction_4	508744.3587298755	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	718	1188	100.0	-23	True	NA	NA
PB.8526.1	chr3	+	2257	1	antisense	novelGene_TBL1XR1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	AAAAAG	-28
PB.407.5	chr1	+	5001	18	full-splice_match	ZFYVE9	ENST00000357206.6	4567	18	-307	-127	-27	-43	multi-exon	FALSE	canonical	1	25048	junction_8	37108.38595875153	NA	2	NA	TRUE	NA	NA	NA	C	coding	1366	4101	480	4580	25.0	-22	True	AATAAA	-22
PB.407.4	chr1	+	5360	20	novel_not_in_catalog	ZFYVE9	novel	5194	19	NA	NA	-37	-52	any annotated donor/acceptor	FALSE	canonical	1	860	junction_1	43764.25635067935	NA	37	2	TRUE	NA	NA	NA	C	coding	1425	4278	671	4948	15.0	-32	True	AATAAA	-13
PB.407.7	chr1	+	2726	5	novel_not_in_catalog	ZFYVE9	novel	5194	19	NA	NA	10	-20930	any annotated donor/acceptor	FALSE	canonical	1	1496	junction_4	46871.64490926257	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2283	443	2725	35.0	15	True	NA	NA
PB.407.6	chr1	+	2305	4	incomplete-splice_match	ZFYVE9	ENST00000361625.5	2625	5	-304	24801	-24	-24801	3prime_fragment	FALSE	canonical	1	70725	junction_1	22051.59293313952	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1827	477	2303	65.0	-19	True	NA	NA
PB.407.1	chr1	+	5068	19	full-splice_match	ZFYVE9	ENST00000287727.7	5194	19	75	51	75	-51	multi-exon	FALSE	canonical	1	25048	junction_9	36407.18393072213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1425	4278	378	4655	15.0	80	False	AATAAA	-14
PB.407.3	chr1	+	4795	19	full-splice_match	ZFYVE9	ENST00000287727.7	5194	19	-37	436	-37	-266	multi-exon	FALSE	canonical	1	25048	junction_9	36407.18393072213	NA	5	1	TRUE	NA	NA	NA	C	coding	1425	4278	490	4767	30.0	-32	True	TATAAA	-28
PB.407.2	chr1	+	2001	4	incomplete-splice_match	ZFYVE9	ENST00000361625.5	2625	5	-323	25124	-43	-25124	3prime_fragment	FALSE	canonical	1	70725	junction_1	22051.59293313952	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1506	496	2001	70.0	-38	True	NA	NA
PB.6278.1	chr19	-	2520	1	novel_in_catalog	SLC27A5	novel	2003	6	NA	NA	-4	1607	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	126	381	351	731	100.0	-1	True	NA	NA
PB.9015.1	chr4	+	2375	2	antisense	novelGene_SLC10A7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3200	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-10
PB.1500.1	chr10	-	3383	9	full-splice_match	MAT1A	ENST00000372213.7	3410	9	26	1	26	-1	multi-exon	FALSE	canonical	1	87704	junction_3	21800.531249260875	NA	3	NA	TRUE	NA	NA	NA	A	coding	395	1188	236	1423	20.0	-1	True	AATAAA	-17
PB.4990.24	chr17	-	3213	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	-9	-162	combination_of_known_junctions	FALSE	canonical	1	103367	junction_23	264446.7362292213	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	190	2502	35.0	114	False	NA	NA
PB.4990.25	chr17	-	3049	24	full-splice_match	STAT3	ENST00000264657.9	5047	24	94	1904	8	240	multi-exon	FALSE	canonical	1	278333	junction_23	241509.96068015823	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	220	2532	70.0	-1	True	AATAGA	-39
PB.4990.26	chr17	-	3047	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	-4	276	combination_of_known_junctions	FALSE	canonical	1	149719	junction_2	283068.4771929515	NA	1	NA	TRUE	NA	NA	NA	C	coding	722	2169	232	2400	25.0	-13	True	ATTAAA	-17
PB.4990.27	chr17	-	3067	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	6	275	combination_of_known_junctions	FALSE	canonical	1	103367	junction_23	264446.7362292213	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	203	2515	20.0	-3	True	ATTAAA	-16
PB.1157.2	chr1	-	4219	14	full-splice_match	ENAH	ENST00000366843.6	2758	14	72	-1533	72	-72	multi-exon	FALSE	canonical	1	133069	junction_9	208609.14295237744	NA	3	NA	TRUE	NA	NA	NA	C	coding	570	1713	284	1996	40.0	360	False	AATAAA	-13
PB.4990.23	chr17	-	3246	24	full-splice_match	STAT3	ENST00000264657.9	5047	24	91	1710	5	-162	multi-exon	FALSE	canonical	1	278333	junction_23	241509.96068015823	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	223	2535	35.0	-4	True	NA	NA
PB.1683.5	chr10	-	3939	16	novel_not_in_catalog	MCMBP	novel	4169	16	NA	NA	-27	-391	any annotated donor/acceptor	FALSE	canonical	1	3493	junction_10	222123.35721511944	NA	6	NA	TRUE	NA	NA	NA	C	coding	356	1071	1190	2260	10.0	-34	True	AATAAA	-19
PB.1683.6	chr10	-	3723	15	novel_in_catalog	MCMBP	novel	4169	16	NA	NA	-23	-393	no_combination_of_known_junctions	FALSE	canonical	1	35573	junction_2	212837.27891024723	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	289	2046	15.0	-30	True	AATAAA	-17
PB.12140.2	chrX	-	1694	10	full-splice_match	HDAC8	ENST00000373583.6	1710	10	11	5	0	-2	multi-exon	FALSE	canonical	1	16504	junction_5	62160.07385059248	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	106	1161	10.0	-51	True	AATAAA	-11
PB.12140.3	chrX	-	1980	8	full-splice_match	HDAC8	ENST00000439122.7	2373	8	392	1	-6	0	multi-exon	FALSE	canonical	1	37379	junction_1	63875.55720624411	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	9	701	25.0	124	False	NA	NA
PB.1683.3	chr10	-	3817	16	novel_not_in_catalog	MCMBP	novel	4169	16	NA	NA	-74	-387	any annotated donor/acceptor	FALSE	canonical	1	10	junction_7	252956.35983562242	NA	1	1	TRUE	NA	NA	NA	C	coding	291	876	418	1293	10.0	-127	False	AATAAA	-23
PB.12140.1	chrX	-	1752	11	full-splice_match	HDAC8	ENST00000373573.8	2110	11	358	0	1	0	multi-exon	FALSE	canonical	1	141953	junction_4	29552.501984772796	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	81	1214	0.0	-26	True	AATAAA	-16
PB.1683.9	chr10	-	3631	16	full-splice_match	MCMBP	ENST00000360003.7	4169	16	-118	656	-23	-656	multi-exon	FALSE	canonical	1	253062	junction_15	175306.7931264882	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	289	2217	30.0	-30	True	TATAAA	-19
PB.1683.8	chr10	-	3751	16	full-splice_match	MCMBP	ENST00000369077.3	2465	16	-51	-1235	-51	-558	multi-exon	FALSE	canonical	1	253062	junction_15	153529.08455953514	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	317	2239	40.0	-58	True	AATAAA	-28
PB.10385.3	chr7	-	4651	17	full-splice_match	RNF216	ENST00000389902.7	3293	17	58	-1416	15	-1144	multi-exon	FALSE	canonical	1	112033	junction_14	71163.91497800057	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	211	2982	95.0	4	False	NA	NA
PB.10385.2	chr7	-	4713	17	novel_not_in_catalog	RNF216	novel	5639	17	NA	NA	5	-1144	any annotated donor/acceptor	FALSE	canonical	1	38611	junction_13	84354.58672658233	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	1578	3044	95.0	4	True	NA	NA
PB.4105.9	chr15	+	2407	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	-11	458	0	0	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	394	1854	85.0	-23	True	NA	NA
PB.4105.8	chr15	+	5456	10	full-splice_match	MEF2A	ENST00000338042.10	5464	10	67	-59	5	15	multi-exon	FALSE	canonical	1	30270	junction_1	85314.36942939801	NA	8	NA	TRUE	NA	NA	NA	C	coding	486	1461	286	1746	10.0	3	True	AGTAAA	-15
PB.9950.21	chr6	-	2520	16	full-splice_match	SRPK1	ENST00000373825.6	4592	16	229	1843	-12	619	multi-exon	FALSE	canonical	1	388970	junction_2	91632.64998086411	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	58	2025	10.0	33	False	ATTAAA	-41
PB.10385.6	chr7	-	3705	15	novel_in_catalog	RNF216	novel	5639	17	NA	NA	-9	-1144	no_combination_of_known_junctions	FALSE	canonical	1	1927	junction_12	92705.80212265078	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	570	2036	95.0	-10	True	NA	NA
PB.10385.4	chr7	-	4459	17	full-splice_match	RNF216	ENST00000425013.6	5639	17	36	1144	-14	-1144	multi-exon	FALSE	canonical	1	194313	junction_14	60472.702511617535	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	190	2790	95.0	-15	True	NA	NA
PB.4105.3	chr15	+	5577	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	-17	-55	intron_retention	FALSE	canonical	1	5204	junction_5	99860.45359069246	NA	4	NA	TRUE	NA	NA	NA	C	coding	358	1077	921	1997	15.0	-40	True	AAGAAA	-27
PB.4105.2	chr15	+	3508	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	12	397	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	106172.90516483241	NA	5	NA	TRUE	NA	NA	NA	C	coding	486	1461	640	2100	50.0	-6096	False	CATAAA	-13
PB.4105.1	chr15	+	3250	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	1	-397	1	397	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	382	1842	50.0	-11	True	CATAAA	-13
PB.8001.17	chr3	-	3989	2	full-splice_match	TMPPE	ENST00000342462.4	3962	2	-19	-8	-19	4	multi-exon	FALSE	canonical	1	10531	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	453	1362	211	1572	10.0	-20	True	AATAAA	-32
PB.12150.1	chrX	+	2867	4	novel_in_catalog	PBDC1	novel	1201	6	NA	NA	-8	0	intron_retention	FALSE	canonical	1	368294	junction_2	63088.69969072644	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-30	True	AATAAA	-24
PB.4105.6	chr15	+	3182	10	full-splice_match	MEF2A	ENST00000338042.10	5464	10	39	2243	-2	397	multi-exon	FALSE	canonical	1	30270	junction_1	85314.36942939801	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	314	1774	50.0	-25	True	CATAAA	-13
PB.4105.5	chr15	+	2916	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	-8	-54	3	54	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	391	1851	30.0	-20	True	ATTAAA	-9
PB.12150.2	chrX	+	1485	6	full-splice_match	PBDC1	ENST00000373358.7	1201	6	98	-382	-6	382	multi-exon	FALSE	canonical	1	310477	junction_2	76325.02109636132	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	106	807	100.0	-28	True	NA	NA
PB.3462.10	chr14	+	2998	5	full-splice_match	NAA30	ENST00000556492.5	7644	5	33	4613	-2	974	multi-exon	FALSE	canonical	1	59533	junction_1	80209.29382091579	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	122	1210	25.0	0	True	AATAAA	-20
PB.3462.11	chr14	+	4245	4	incomplete-splice_match	NAA30	ENST00000556492.5	7644	5	485	3165	-263	6	5prime_fragment	FALSE	canonical	1	158206	junction_1	45532.86960964451	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	590	1009	25.0	452	False	AATAAA	-21
PB.8480.6	chr3	+	4419	23	novel_in_catalog	MME	novel	2854	23	NA	NA	0	885	combination_of_known_junctions	FALSE	canonical	1	77072	junction_1	70598.69918792314	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	157	2409	25.0	-14	True	NA	NA
PB.8480.5	chr3	+	3230	23	full-splice_match	MME	ENST00000460393.5	5622	23	10	2382	10	-258	multi-exon	FALSE	canonical	1	84043	junction_1	69494.44528762504	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	111	2363	50.0	1	True	AATAAA	-39
PB.3222.16	chr13	-	3769	29	incomplete-splice_match	ABCC4	ENST00000376887.9	5841	31	0	23936	0	-451	3prime_fragment	FALSE	canonical	1	108750	junction_28	55984.978130252915	NA	0	NA	TRUE	NA	NA	NA	C	coding	1215	3645	124	3768	65.0	-1	True	ATTAAA	-38
PB.3222.17	chr13	-	5190	27	novel_not_in_catalog	ABCC4	novel	5856	31	NA	NA	-65	11348	any annotated donor/acceptor	FALSE	canonical	1	2236	junction_1	69936.37669585603	NA	7	2	TRUE	NA	NA	NA	C	coding	1123	3372	227	3598	20.0	270	False	AATAAA	-17
PB.3222.14	chr13	-	4642	31	full-splice_match	ABCC4	ENST00000645237.1	5856	31	-21	1235	8	490	multi-exon	FALSE	canonical	1	108750	junction_30	56250.81088581944	NA	1	NA	TRUE	NA	NA	NA	C	coding	1325	3978	154	4131	55.0	-31	True	NA	NA
PB.3222.15	chr13	-	3915	30	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	3	-451	combination_of_known_junctions	FALSE	canonical	1	9237	junction_29	73744.76467046337	NA	0	NA	TRUE	NA	NA	NA	C	coding	1172	3516	399	3914	65.0	6	True	ATTAAA	-38
PB.3222.10	chr13	-	5759	30	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	4628	junction_21	70111.75210707814	NA	2	NA	TRUE	NA	NA	NA	C	coding	1295	3888	133	4020	25.0	-10	True	AATAAA	-18
PB.3222.11	chr13	-	5751	30	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	958	junction_22	70772.94105284814	NA	10	1	TRUE	NA	NA	NA	C	coding	1291	3876	137	4012	25.0	-14	True	AATAAA	-18
PB.10467.1	chr7	+	3904	14	full-splice_match	PLEKHA8	ENST00000449726.5	7835	14	-19	3950	-19	-3950	multi-exon	TRUE	canonical	1	4224	junction_4	8740.141281541264	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	422	1981	15.0	-309	False	ATTAAA	-28
PB.3222.18	chr13	-	3416	22	incomplete-splice_match	ABCC4	ENST00000645237.1	5856	31	-52	55177	-23	35	3prime_fragment	FALSE	canonical	1	108750	junction_21	61102.7161976096	NA	1	NA	TRUE	NA	NA	NA	C	coding	954	2865	185	3049	15.0	312	False	NA	NA
PB.2656.1	chr12	+	2125	3	novel_not_in_catalog	AC009779.2	novel	1443	2	NA	NA	-23	939	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	21276.0	NA	4	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-28	True	NA	NA
PB.4238.1	chr16	-	1815	1	genic	AC087190.1	novel	NA	NA	NA	NA	1229	1703	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.5426.1	chr18	+	2666	3	antisense	novelGene_OSBPL1A_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1331.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.5426.2	chr18	+	1650	1	antisense	novelGene_OSBPL1A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-14
PB.11604.2	chr9	-	5735	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	-3	-3046	-3	13	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	3	NA	TRUE	NA	NA	NA	C	coding	213	642	553	1194	35.0	6113	False	AATAAA	-33
PB.7991.4	chr3	+	4643	8	novel_not_in_catalog	TGFBR2	novel	4621	7	NA	NA	-28	-31	any annotated donor/acceptor	TRUE	canonical	1	1752	junction_4	320757.51234710315	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	1063	2139	10.0	-7563	False	AATAAA	-36
PB.7991.1	chr3	+	4590	8	full-splice_match	TGFBR2	ENST00000359013.4	4605	8	-19	34	-19	-26	multi-exon	FALSE	canonical	1	137279	junction_1	256500.13082782994	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	405	2081	10.0	-19	True	AATAAA	-41
PB.7991.3	chr3	+	4466	7	full-splice_match	TGFBR2	ENST00000295754.9	4621	7	129	26	30	-26	multi-exon	FALSE	canonical	1	378396	junction_1	146289.81298740144	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	359	1957	10.0	30	True	AATAAA	-41
PB.7991.2	chr3	+	4228	7	novel_not_in_catalog	TGFBR2	novel	4621	7	NA	NA	-20	-29	any annotated donor/acceptor	FALSE	canonical	1	3349	junction_1	270564.34718242165	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	124	1722	10.0	-7654	False	AATAAA	-38
PB.10467.2	chr7	+	7552	14	full-splice_match	PLEKHA8	ENST00000440706.2	7514	14	-50	12	-50	-9	multi-exon	FALSE	canonical	1	4224	junction_4	8740.141281541264	NA	2	NA	TRUE	NA	NA	NA	C	coding	519	1560	129	1688	25.0	-16	False	AATAAA	-17
PB.333.1	chr1	+	2096	19	full-splice_match	CTPS1	ENST00000650070.1	2838	19	2	740	2	44	multi-exon	FALSE	canonical	1	320551	junction_1	146532.54578681636	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	146	1921	0.0	2	True	NA	NA
PB.11275.42	chr8	-	2671	6	full-splice_match	YWHAZ	ENST00000353245.7	2829	6	-51	209	-4	167	multi-exon	FALSE	canonical	1	9976	junction_2	750454.7415845942	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	136	873	35.0	-14	True	GGGGCT	-26
PB.4030.2	chr15	+	2677	8	incomplete-splice_match	IL16	ENST00000302987.8	3999	18	67356	-298	-4157	-2	5prime_fragment	FALSE	canonical	1	32940	junction_1	158498.4122334688	NA	0	NA	TRUE	NA	NA	NA	B	coding	740	2223	157	2379	15.0	0	True	AATAAA	-26
PB.4030.3	chr15	+	2530	8	novel_not_in_catalog	IL16	novel	2977	13	NA	NA	-4157	7	any annotated donor/acceptor	FALSE	canonical	1	2454	junction_1	172112.8147174381	NA	0	NA	TRUE	NA	NA	NA	B	coding	630	1893	346	2238	25.0	0	True	AATAAA	-20
PB.3712.43	chr14	-	1723	2	full-splice_match	IGHV3-30	ENST00000603660.1	431	2	1	-1293	1	1293	multi-exon	FALSE	canonical	1	55437	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	80	601	15.0	NA	False	NA	NA
PB.4030.1	chr15	+	2742	8	novel_not_in_catalog	IL16	novel	2977	13	NA	NA	-4157	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	199076.89528687458	NA	24	2	TRUE	NA	NA	NA	B	coding	630	1893	564	2456	35.0	0	True	AATAAA	-14
PB.4030.6	chr15	+	2431	7	novel_in_catalog	IL16	novel	5120	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11932	junction_1	176271.07653617545	NA	0	NA	TRUE	NA	NA	NA	B	coding	631	1896	236	2131	20.0	-18	True	AATAAA	-28
PB.3712.44	chr14	-	2778	4	novel_not_in_catalog	IGHV3-30	novel	431	2	NA	NA	-14165	1292	any annotated donor/acceptor	FALSE	canonical	1	1078	junction_1	33335.87743957952	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	59	460	20.0	NA	False	NA	NA
PB.4030.4	chr15	+	2666	7	novel_not_in_catalog	IL16	novel	5120	20	NA	NA	19	-3	any annotated donor/acceptor	FALSE	canonical	1	7053	junction_6	177039.45673438325	NA	1	1	TRUE	NA	NA	NA	B	coding	590	1773	198	1970	30.0	-5151	False	NA	NA
PB.4030.5	chr15	+	3403	6	incomplete-splice_match	IL16	ENST00000394652.6	2397	7	35	1018	-22	-733	3prime_fragment	FALSE	canonical	1	172645	junction_5	132411.56708022152	NA	0	NA	TRUE	NA	NA	NA	B	coding	607	1824	182	2005	25.0	-40	True	AGTAAA	-21
PB.3712.49	chr14	-	2811	3	novel_not_in_catalog	IGHV4-31	novel	428	2	NA	NA	34	3004	any annotated donor/acceptor	FALSE	canonical	1	4877	junction_1	34370.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	133	402	39	440	70.0	NA	False	NA	NA
PB.3712.48	chr14	-	3595	3	novel_not_in_catalog	IGHV4-31	novel	428	2	NA	NA	0	3754	any annotated donor/acceptor	FALSE	canonical	1	4877	junction_1	34370.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	133	402	73	474	65.0	NA	False	AATAAA	-7
PB.333.6	chr1	+	2308	19	full-splice_match	CTPS1	ENST00000650070.1	2838	19	9	521	0	-14	multi-exon	FALSE	canonical	1	320551	junction_1	146532.54578681636	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	139	1914	30.0	9	True	TATAAA	-24
PB.8853.11	chr4	-	4366	28	novel_not_in_catalog	SEC31A	novel	1564	8	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	7178	junction_6	373300.1140610852	NA	3	NA	TRUE	NA	NA	NA	C	coding	894	2685	141	2825	20.0	9345	False	ATTAAA	-13
PB.1480.23	chr10	-	2213	9	full-splice_match	AP3M1	ENST00000355264.8	5124	9	216	2695	-5	14	multi-exon	FALSE	canonical	1	145119	junction_8	146640.08433017	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	97	1353	25.0	-28	True	ATTAAA	-24
PB.1480.22	chr10	-	2329	10	full-splice_match	AP3M1	ENST00000372745.1	2320	10	5	-14	5	14	multi-exon	FALSE	canonical	1	199131	junction_9	151848.36486914207	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	213	1469	25.0	-18	True	ATTAAA	-24
PB.1480.21	chr10	-	2504	9	full-splice_match	AP3M1	ENST00000355264.8	5124	9	230	2390	9	319	multi-exon	FALSE	canonical	1	145119	junction_8	146640.08433017	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	83	1339	45.0	-14	True	AATATA	-15
PB.1480.20	chr10	-	2633	10	full-splice_match	AP3M1	ENST00000372745.1	2320	10	6	-319	6	319	multi-exon	FALSE	canonical	1	199131	junction_9	151848.36486914207	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	212	1468	45.0	-17	True	AATATA	-15
PB.3173.1	chr13	+	2878	2	full-splice_match	DLEU1	ENST00000378180.8	981	2	24	-1921	24	0	multi-exon	FALSE	canonical	1	99447	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-34	True	AATAAA	-21
PB.8634.2	chr3	-	5685	6	novel_not_in_catalog	AC132008.2	novel	956	6	NA	NA	12	32	intron_retention	FALSE	non_canonical	0	0	junction_1	107178.3488404258	NA	2	NA	TRUE	NA	NA	NA	B	coding	187	564	902	1465	10.0	-14	True	NA	NA
PB.6998.5	chr2	-	2202	5	novel_not_in_catalog	IGFBP5	novel	6215	4	NA	NA	-23	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	684183.1914207992	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	774	1592	5.0	-2	True	AATAAA	-16
PB.3173.2	chr13	+	2838	3	full-splice_match	DLEU1	ENST00000469754.2	2955	3	131	-14	131	14	multi-exon	TRUE	canonical	1	108331	junction_2	2540.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	24	False	AATAAA	-35
PB.1189.2	chr1	+	5515	10	novel_not_in_catalog	URB2	novel	5613	10	NA	NA	-50	-179	any annotated donor/acceptor	FALSE	canonical	1	591	junction_1	47041.17149901775	NA	1	NA	TRUE	NA	NA	NA	C	coding	1524	4575	218	4792	75.0	-104	False	NA	NA
PB.8634.4	chr3	-	3263	7	novel_not_in_catalog	AC132008.2	novel	956	6	NA	NA	-10	-1027	intron_retention	FALSE	non_canonical	0	0	junction_1	97906.92688424382	NA	2	NA	TRUE	NA	NA	NA	B	coding	106	321	367	687	25.0	-2	True	NA	NA
PB.8634.5	chr3	-	2534	9	novel_not_in_catalog	AC132008.2	novel	956	6	NA	NA	10	-1028	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	92023.22659651951	NA	1	NA	TRUE	NA	NA	NA	B	coding	150	453	393	845	20.0	-16	True	NA	NA
PB.177.15	chr1	+	2463	17	novel_in_catalog	SRRM1	novel	480	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	38943	junction_5	185457.46448721696	NA	1	1	TRUE	NA	NA	NA	C	coding	812	2436	28	2463	75.0	-2	True	NA	NA
PB.177.14	chr1	+	3765	18	novel_not_in_catalog	SRRM1	novel	480	5	NA	NA	-1	4	intron_retention	FALSE	non_canonical	0	0	junction_5	192928.74235692722	NA	30	3	TRUE	NA	NA	NA	C	coding	908	2727	54	2780	20.0	-28	True	AATAAA	-21
PB.177.17	chr1	+	2285	15	incomplete-splice_match	SRRM1	ENST00000479034.5	2671	17	-34	2022	-1	65	3prime_fragment	FALSE	canonical	1	211070	junction_3	160947.08005588455	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2232	54	2285	80.0	-28	True	NA	NA
PB.177.16	chr1	+	2378	16	incomplete-splice_match	SRRM1	ENST00000479034.5	2671	17	-34	1397	-1	690	3prime_fragment	FALSE	canonical	1	140993	junction_15	172829.8733168803	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2325	54	2378	35.0	-28	True	NA	NA
PB.1298.1	chr10	+	2841	12	novel_in_catalog	CDC123	novel	646	8	NA	NA	-8	-4	intron_retention	FALSE	canonical	1	980244	junction_9	276881.9415518176	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	1935	2594	25.0	0	True	AATAAA	-13
PB.177.10	chr1	+	3701	19	novel_not_in_catalog	SRRM1	novel	480	5	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_15	196696.24952669351	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	55	2214	35.0	-29	True	AATAAA	-8
PB.1298.3	chr10	+	1912	12	incomplete-splice_match	CDC123	ENST00000281141.8	1542	13	224	-2	-6	1	intron_retention	FALSE	canonical	1	980244	junction_10	274683.9590283187	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	57	1061	15.0	2	True	AATAAA	-19
PB.1298.2	chr10	+	1314	13	full-splice_match	CDC123	ENST00000281141.8	1542	13	224	4	-6	-4	multi-exon	FALSE	canonical	1	980244	junction_10	267056.4558289309	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	57	1067	25.0	2	True	AATAAA	-13
PB.177.19	chr1	+	3697	18	novel_not_in_catalog	SRRM1	novel	480	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_17	210144.05684455248	NA	4	1	TRUE	NA	NA	NA	C	coding	902	2709	53	2761	35.0	-27	True	AATAAA	-12
PB.177.18	chr1	+	2283	5	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-1	-17	intron_retention	FALSE	canonical	1	96387	junction_3	224074.57308937912	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-28	True	AAGAAA	-33
PB.3776.10	chr15	+	4342	12	novel_not_in_catalog	IVD	novel	668	5	NA	NA	12	-11	any annotated donor/acceptor	FALSE	canonical	1	3215	junction_6	146347.78145599237	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	22	1317	75.0	12	True	AATAAA	-16
PB.3776.11	chr15	+	4398	12	novel_in_catalog	IVD	novel	668	5	NA	NA	13	-17	combination_of_known_junctions	FALSE	canonical	1	325	junction_2	149914.23898839988	NA	3	NA	TRUE	NA	NA	NA	C	coding	452	1359	21	1379	75.0	13	True	AATAAA	-10
PB.3776.12	chr15	+	2667	8	novel_not_in_catalog	IVD	novel	668	5	NA	NA	13	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	183726.1468478317	NA	2	NA	TRUE	NA	NA	NA	C	coding	263	792	21	812	80.0	13	True	AATAAA	-7
PB.3776.13	chr15	+	2412	12	novel_in_catalog	IVD	novel	668	5	NA	NA	20	-859	combination_of_known_junctions	FALSE	canonical	1	7979	junction_11	149244.85873122222	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	14	1174	40.0	20	True	ATTAAA	-10
PB.9354.1	chr5	-	5852	12	full-splice_match	ELL2	ENST00000237853.8	6046	12	198	-4	-25	4	multi-exon	TRUE	canonical	1	26720	junction_2	111929.90393430972	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	153	2075	5.0	-1	True	AATAAA	-21
PB.11177.7	chr8	-	2706	10	novel_in_catalog	TRAM1	novel	3394	11	NA	NA	-27	-2	intron_retention	FALSE	canonical	1	30895	junction_8	718279.9122412747	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	382	1218	20.0	1	True	AATAAA	-16
PB.10015.13	chr6	+	2598	12	full-splice_match	HSP90AB1	ENST00000371554.2	2674	12	77	-1	77	1	multi-exon	FALSE	canonical	1	29757	junction_1	2597470.003665143	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	138	2312	10.0	0	True	AATAAA	-22
PB.10015.12	chr6	+	3094	10	novel_in_catalog	HSP90AB1	novel	2644	12	NA	NA	13	-1	intron_retention	FALSE	canonical	1	1694090	junction_5	3076404.439321296	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	1722	2810	10.0	-1	True	AATAAA	-20
PB.3516.8	chr14	-	1917	7	full-splice_match	RDH11	ENST00000381346.8	2588	7	79	592	-2	0	multi-exon	FALSE	canonical	1	794325	junction_6	358728.2901781499	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	33	989	100.0	-6	True	NA	NA
PB.3516.9	chr14	-	1913	7	full-splice_match	RDH11	ENST00000553384.5	1926	7	-16	29	-4	0	multi-exon	FALSE	canonical	1	26613	junction_5	630063.5577686896	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	68	985	100.0	-12	True	NA	NA
PB.3516.6	chr14	-	2294	6	novel_in_catalog	AL049779.1	novel	670	5	NA	NA	-5405	-17529	intron_retention	FALSE	canonical	1	794325	junction_5	380465.14984035	NA	0	NA	TRUE	NA	NA	NA	B	coding	188	567	800	1366	100.0	-14	True	NA	NA
PB.3516.7	chr14	-	2098	8	novel_not_in_catalog	AL049779.1	novel	670	5	NA	NA	-5392	-17529	any annotated donor/acceptor	FALSE	canonical	1	1381	junction_5	722834.4556643884	NA	1	1	TRUE	NA	NA	NA	B	coding	188	567	604	1170	100.0	-1	True	NA	NA
PB.3516.4	chr14	-	3480	5	novel_in_catalog	AL049779.1	novel	670	5	NA	NA	-5398	-17529	intron_retention	FALSE	canonical	1	794325	junction_4	425257.46555256087	NA	0	NA	TRUE	NA	NA	NA	B	coding	188	567	1986	2552	100.0	-7	True	NA	NA
PB.3516.5	chr14	-	3134	6	novel_in_catalog	AL049779.1	novel	670	5	NA	NA	-5392	-17529	intron_retention	FALSE	canonical	1	794325	junction_5	391942.9505792903	NA	1	NA	TRUE	NA	NA	NA	B	coding	145	438	57	494	100.0	-1	True	NA	NA
PB.3516.2	chr14	-	2383	6	novel_in_catalog	AL049779.1	novel	670	5	NA	NA	-5401	-16940	no_combination_of_known_junctions	FALSE	canonical	1	10492	junction_4	687297.5413075767	NA	1	NA	TRUE	NA	NA	NA	B	coding	266	801	66	866	55.0	-10	True	AATAAA	-30
PB.3516.1	chr14	-	2472	7	full-splice_match	RDH11	ENST00000381346.8	2588	7	55	61	-5	-61	multi-exon	FALSE	canonical	1	794325	junction_6	358728.2901781499	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	57	1013	15.0	-1	True	AATAAA	-14
PB.1964.34	chr11	+	5671	5	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-3	intron_retention	FALSE	canonical	1	599322	junction_1	295762.8310948656	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	3008	3382	30.0	4	True	AATAAA	-25
PB.1964.37	chr11	+	2610	7	novel_not_in_catalog	MS4A1	novel	495	3	NA	NA	0	11	any annotated donor/acceptor	FALSE	canonical	1	664	junction_4	442249.63166497444	NA	18	2	TRUE	NA	NA	NA	C	coding	149	450	560	1009	20.0	4	True	AATAAA	-37
PB.1964.36	chr11	+	2898	7	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	191	intron_retention	FALSE	canonical	1	263820	junction_2	414898.5730157097	NA	2	NA	TRUE	NA	NA	NA	C	coding	203	612	2233	2844	35.0	4	True	TTTAAA	-21
PB.9622.3	chr5	+	2690	11	novel_not_in_catalog	ERGIC1	novel	2881	10	NA	NA	6	-163	any annotated donor/acceptor	FALSE	canonical	1	23	junction_6	710982.4874050627	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	90	989	85.0	-19	True	NA	NA
PB.2462.1	chr12	-	2672	4	full-splice_match	CD69	ENST00000536709.1	1020	4	0	-1652	0	-1	multi-exon	FALSE	canonical	1	402155	junction_3	74957.92468815793	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	82	576	35.0	-1	True	AATAAA	-16
PB.3220.11	chr13	+	3320	8	novel_in_catalog	GPR180	novel	8822	9	NA	NA	-30	-5351	no_combination_of_known_junctions	FALSE	canonical	1	24971	junction_3	55646.3542752124	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	56	580	25.0	16	True	ATTAAA	-29
PB.2462.3	chr12	-	4075	2	full-splice_match	CD69	ENST00000543147.1	605	2	-2	-3468	-2	-6	multi-exon	FALSE	canonical	1	402155	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	138	417	1110	1526	45.0	-3	True	AATAAA	-11
PB.2462.2	chr12	-	3045	3	full-splice_match	CD69	ENST00000416624.6	962	3	-3	-2080	-3	-2	multi-exon	FALSE	canonical	1	402155	junction_2	78387.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	135	408	85	492	35.0	-4	True	AATAAA	-15
PB.3220.14	chr13	+	3352	10	novel_not_in_catalog	GPR180	novel	8822	9	NA	NA	-7	-5361	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	55642.0817403075	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	220	1239	20.0	39	True	ATTAAA	-19
PB.2462.4	chr12	-	2043	4	novel_in_catalog	CD69	novel	1676	5	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	402155	junction_3	70861.38048017098	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	84	491	45.0	-3	True	AATAAA	-11
PB.2462.7	chr12	-	2829	1	novel_in_catalog	CD69	novel	1676	5	NA	NA	0	-2113	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	NA	NA
PB.2462.6	chr12	-	1610	5	full-splice_match	CD69	ENST00000228434.7	1676	5	0	66	0	-66	multi-exon	FALSE	canonical	1	402155	junction_4	76188.5061881876	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	82	681	25.0	-1	True	AATAAA	-14
PB.2666.7	chr12	+	4987	29	novel_not_in_catalog	ERBB3	novel	237	2	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	878	junction_1	78576.4302245701	NA	1	1	TRUE	NA	NA	NA	C	coding	1283	3852	385	4236	100.0	-4	True	NA	NA
PB.2666.6	chr12	+	4664	28	novel_not_in_catalog	ERBB3	novel	237	2	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	1178	junction_27	63678.679257488155	NA	1	NA	TRUE	NA	NA	NA	C	coding	1257	3774	140	3913	100.0	-10	True	NA	NA
PB.2666.5	chr12	+	5084	28	full-splice_match	ERBB3	ENST00000267101.7	5919	28	298	537	-8	134	multi-exon	FALSE	canonical	1	172883	junction_9	48173.2226095846	NA	1	NA	TRUE	NA	NA	NA	C	coding	1342	4029	143	4171	80.0	-13	True	NA	NA
PB.2666.4	chr12	+	4349	28	full-splice_match	ERBB3	ENST00000267101.7	5919	28	281	1289	5	-120	multi-exon	FALSE	canonical	1	172883	junction_9	48173.2226095846	NA	1	NA	TRUE	NA	NA	NA	C	coding	1342	4029	160	4188	30.0	-3174	False	TTTAAA	-13
PB.2666.3	chr12	+	5689	28	full-splice_match	ERBB3	ENST00000267101.7	5919	28	234	-4	-42	4	multi-exon	FALSE	canonical	1	172883	junction_9	48173.2226095846	NA	1	NA	TRUE	NA	NA	NA	C	coding	1342	4029	207	4235	30.0	-3221	False	AATAAA	-25
PB.2666.2	chr12	+	4881	27	novel_not_in_catalog	ERBB3	novel	237	2	NA	NA	-82	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	66541.40979061893	NA	7	1	TRUE	NA	NA	NA	C	coding	902	2709	247	2955	90.0	-3261	False	NA	NA
PB.2666.1	chr12	+	4920	28	full-splice_match	ERBB3	ENST00000267101.7	5919	28	301	698	-5	1	multi-exon	FALSE	canonical	1	172883	junction_9	48173.2226095846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1342	4029	140	4168	100.0	-10	True	NA	NA
PB.1964.32	chr11	+	1452	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-240	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	375	1268	10.0	4	True	NA	NA
PB.161.1	chr1	-	5296	7	full-splice_match	E2F2	ENST00000361729.2	5191	7	-105	0	-105	0	multi-exon	FALSE	canonical	1	34152	junction_5	27435.947524289288	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	533	1846	5.0	-112	False	ATTAAA	-21
PB.2666.8	chr12	+	4993	29	full-splice_match	ERBB3	ENST00000415288.6	4353	29	-8	-632	-2	134	multi-exon	FALSE	canonical	1	158	junction_1	78548.3615052987	NA	3	1	TRUE	NA	NA	NA	C	coding	1283	3852	229	4080	80.0	-5	True	NA	NA
PB.11275.49	chr8	-	2148	6	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	181	135	any annotated donor/acceptor	FALSE	canonical	1	1109	junction_5	819958.3607845949	NA	3	NA	TRUE	NA	NA	NA	C	coding	245	738	412	1149	25.0	6423	False	NA	NA
PB.6338.38	chr2	-	4793	20	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	244850.9041561705	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	1498	3072	30.0	-13	True	ATTAAA	-17
PB.4636.6	chr17	-	2364	19	full-splice_match	VPS53	ENST00000571805.5	2356	19	-13	5	-3	-5	multi-exon	FALSE	canonical	1	41532	junction_12	58996.4411862704	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	154	2250	20.0	-24	True	AATAAA	-36
PB.4636.7	chr17	-	4906	18	novel_not_in_catalog	VPS53	novel	13106	22	NA	NA	5	5384	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	85647.15959169087	NA	8	1	TRUE	NA	NA	NA	C	coding	685	2058	133	2190	85.0	-3	True	NA	NA
PB.4636.4	chr17	-	2487	15	novel_not_in_catalog	VPS53	novel	13106	22	NA	NA	-6	651	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	82446.75369399678	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	131	1810	10.0	-1	True	NA	NA
PB.4636.5	chr17	-	2999	22	full-splice_match	VPS53	ENST00000437048.6	13106	22	17	10090	4	195	multi-exon	FALSE	canonical	1	41532	junction_15	55640.19593811426	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	134	2629	10.0	-4	True	NA	NA
PB.4636.2	chr17	-	4573	23	novel_not_in_catalog	VPS53	novel	13106	22	NA	NA	1	1397	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	67677.0389817766	NA	3	1	TRUE	NA	NA	NA	C	coding	831	2496	140	2635	85.0	-10	True	NA	NA
PB.4636.3	chr17	-	2602	22	novel_not_in_catalog	VPS53	novel	13106	22	NA	NA	-4	1147	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	68567.07379991503	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	129	2495	20.0	1	True	NA	NA
PB.4636.1	chr17	-	2865	22	novel_not_in_catalog	VPS53	novel	13106	22	NA	NA	5	1406	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	68567.07379991503	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	133	2499	95.0	-3	True	NA	NA
PB.4636.8	chr17	-	2702	12	incomplete-splice_match	VPS53	ENST00000571805.5	2356	19	-24	67764	-14	408	3prime_fragment	FALSE	canonical	1	41532	junction_5	74222.22627392587	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	165	1430	40.0	6442	False	AAGAAA	-20
PB.9629.5	chr5	-	1678	6	novel_not_in_catalog	THOC3	novel	453	3	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	4371	junction_5	6349.270383280271	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	66	1049	45.0	NA	False	AATAAA	-20
PB.9629.4	chr5	-	1493	6	full-splice_match	THOC3	ENST00000265097.8	1589	6	28	68	-3	-4	multi-exon	FALSE	canonical	1	4371	junction_5	181870.80158552114	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	64	1119	60.0	NA	False	TTTAAA	-6
PB.11275.48	chr8	-	2259	8	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	17	135	any annotated donor/acceptor	FALSE	canonical	1	9976	junction_2	808256.7486204682	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	523	1260	25.0	7	True	NA	NA
PB.9629.1	chr5	-	2602	7	novel_not_in_catalog	AC138965.2	novel	568	2	NA	NA	-9736	-9803	any annotated donor/acceptor	FALSE	canonical	1	236	junction_1	170296.17790851914	NA	0	NA	TRUE	NA	NA	NA	B	coding	351	1056	67	1122	80.0	NA	False	NA	NA
PB.9629.3	chr5	-	2508	6	full-splice_match	THOC3	ENST00000265097.8	1589	6	-4	-915	-4	915	multi-exon	FALSE	canonical	1	4371	junction_5	181870.80158552114	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	15	1151	25.0	NA	False	NA	NA
PB.9629.2	chr5	-	1490	7	novel_not_in_catalog	AC138965.2	novel	568	2	NA	NA	-9728	-10907	any annotated donor/acceptor	FALSE	canonical	1	236	junction_1	170296.17790851914	NA	0	NA	TRUE	NA	NA	NA	B	coding	351	1056	59	1114	15.0	NA	False	NA	NA
PB.3294.16	chr14	+	3079	11	novel_in_catalog	METTL17	novel	1749	14	NA	NA	1	-3	intron_retention	FALSE	canonical	1	210063	junction_3	226659.10929907495	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	2369	2944	35.0	17	True	AATAAA	-14
PB.3294.15	chr14	+	1786	13	novel_in_catalog	METTL17	novel	1749	14	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	22929	junction_12	254924.9208925569	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	519	929	35.0	11	True	AATAAA	-14
PB.3294.14	chr14	+	2637	11	novel_in_catalog	METTL17	novel	1749	14	NA	NA	-3	1	intron_retention	FALSE	canonical	1	333478	junction_1	174865.743656555	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	13	618	20.0	11	True	AATAAA	-20
PB.3294.13	chr14	+	2663	11	novel_in_catalog	METTL17	novel	1749	14	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	210063	junction_3	213219.87405671168	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	1880	2521	35.0	11	True	AATAAA	-14
PB.3294.12	chr14	+	1634	13	full-splice_match	METTL17	ENST00000555533.6	1605	13	-6	-23	1	-2	multi-exon	FALSE	canonical	1	210063	junction_3	195150.93969346664	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	522	1484	20.0	8	True	AATAAA	-22
PB.3294.11	chr14	+	1817	13	novel_in_catalog	METTL17	novel	1749	14	NA	NA	0	-3	intron_retention	FALSE	canonical	1	210063	junction_3	208333.04572020145	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	523	933	35.0	7	True	AATAAA	-14
PB.3294.10	chr14	+	2154	11	novel_in_catalog	METTL17	novel	1749	14	NA	NA	0	2	intron_retention	FALSE	canonical	1	210063	junction_3	188611.7621984642	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	523	933	20.0	7	True	AATAAA	-21
PB.1556.4	chr10	-	2345	13	novel_in_catalog	TCTN3	novel	2739	14	NA	NA	0	-88	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	173192.08156462436	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	25	1767	35.0	2	True	AGTAAA	-27
PB.1556.5	chr10	-	4300	12	novel_in_catalog	TCTN3	novel	2739	14	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	145817.4744265884	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	3017	3637	30.0	2	True	AATAAA	-24
PB.1556.6	chr10	-	2383	13	novel_in_catalog	TCTN3	novel	2739	14	NA	NA	11	-11	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	179135.62319363566	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	769	1728	25.0	13	True	AATAAA	-16
PB.1556.7	chr10	-	2266	12	novel_in_catalog	TCTN3	novel	2739	14	NA	NA	-2	-16	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	187169.20382679685	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	30	1616	20.0	-3	True	AATAAA	-11
PB.1556.1	chr10	-	2468	14	full-splice_match	TCTN3	ENST00000371217.9	2514	14	-31	77	1	-77	multi-exon	FALSE	non_canonical	0	0	junction_4	134290.5600070897	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	2	1879	15.0	-1	True	AGTAAA	-38
PB.1556.2	chr10	-	2522	14	novel_not_in_catalog	TCTN3	novel	2739	14	NA	NA	12	-2	any annotated donor/acceptor	FALSE	canonical	1	24149	junction_4	128621.09548440904	NA	2	NA	TRUE	NA	NA	NA	C	coding	602	1809	45	1853	35.0	10	True	AATAAA	-30
PB.1556.9	chr10	-	2042	14	full-splice_match	TCTN3	ENST00000371217.9	2514	14	-5	477	-2	-182	multi-exon	FALSE	non_canonical	0	0	junction_4	134290.5600070897	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	30	1853	5.0	-3	True	AATAAA	-18
PB.1344.3	chr10	+	2285	7	full-splice_match	RAB18	ENST00000356940.10	4886	7	22	2579	-9	1146	multi-exon	FALSE	canonical	1	589639	junction_1	178127.847109332	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	81	701	30.0	-14	True	ATTAAA	-26
PB.2658.1	chr12	+	1994	4	full-splice_match	ORMDL2	ENST00000243045.9	2141	4	123	24	1	-24	multi-exon	FALSE	canonical	1	786989	junction_1	121818.96284514437	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	73	534	85.0	-2	True	NA	NA
PB.2658.2	chr12	+	1847	4	full-splice_match	ORMDL2	ENST00000243045.9	2141	4	125	169	0	-169	multi-exon	FALSE	canonical	1	786989	junction_1	121818.96284514437	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	71	532	5.0	0	True	NA	NA
PB.1344.7	chr10	+	2796	7	full-splice_match	RAB18	ENST00000356940.10	4886	7	36	2054	5	1671	multi-exon	FALSE	canonical	1	589639	junction_1	178127.847109332	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	67	687	40.0	0	True	AATAAA	-20
PB.1344.6	chr10	+	1808	7	full-splice_match	RAB18	ENST00000356940.10	4886	7	33	3045	2	680	multi-exon	FALSE	canonical	1	589639	junction_1	178127.847109332	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	70	690	15.0	-3	True	AATAAA	-23
PB.1344.5	chr10	+	2555	8	full-splice_match	RAB18	ENST00000621805.4	4894	8	-69	2408	2	1340	multi-exon	FALSE	canonical	1	23964	junction_3	433679.8852187486	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	70	777	30.0	-3	True	AATAAA	-20
PB.1344.4	chr10	+	5493	3	incomplete-splice_match	RAB18	ENST00000465772.5	985	6	-78	6364	0	-5841	3prime_fragment	FALSE	canonical	1	589639	junction_1	248031.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-5	True	NA	NA
PB.11627.14	chr9	-	3812	25	incomplete-splice_match	AGTPBP1	ENST00000376083.7	4208	26	-139	28563	-69	-21229	3prime_fragment	FALSE	canonical	1	50446	junction_15	70277.41033188827	NA	0	NA	TRUE	NA	NA	NA	C	coding	1128	3387	217	3603	10.0	-32	True	AATAAA	-17
PB.1344.9	chr10	+	1121	7	full-splice_match	RAB18	ENST00000356940.10	4886	7	66	3699	6	26	multi-exon	FALSE	canonical	1	589639	junction_1	178127.847109332	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	37	657	15.0	-7	True	AATAAA	-18
PB.1344.8	chr10	+	2537	6	novel_in_catalog	RAB18	novel	4811	5	NA	NA	5	1338	intron_retention	FALSE	canonical	1	589639	junction_1	169944.55638401603	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	67	498	30.0	0	True	AATAAA	-18
PB.6876.1	chr2	+	2837	1	antisense	novelGene_SESTD1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.12090.14	chrX	-	2649	14	incomplete-splice_match	KDM5C	ENST00000404049.7	5677	26	-27	9016	-5	6	3prime_fragment	FALSE	canonical	1	147640	junction_10	146194.25994916094	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	315	2450	20.0	3	True	NA	NA
PB.627.1	chr1	-	3767	21	full-splice_match	PTPN22	ENST00000359785.9	3654	21	19	-132	-4	132	multi-exon	FALSE	canonical	1	56189	junction_14	29933.182013402784	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	118	2541	50.0	-29	True	AATAAA	-11
PB.627.3	chr1	-	3616	20	novel_in_catalog	PTPN22	novel	1794	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4837	junction_2	38244.66227699547	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	131	2452	20.0	-42	True	AATAAA	-20
PB.627.2	chr1	-	3613	21	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	3	1	any annotated donor/acceptor	FALSE	canonical	1	21	junction_14	37030.491038163396	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	128	2518	20.0	-39	True	AATAAA	-22
PB.627.5	chr1	-	3565	21	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	2528	junction_7	38488.034898653896	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	88	2472	20.0	1	True	AATAAA	-20
PB.627.4	chr1	-	3556	21	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	11699	junction_6	37294.52289180678	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	124	2463	20.0	-35	True	AATAAA	-20
PB.627.7	chr1	-	3822	23	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	462	junction_4	47639.121646239524	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	131	2731	20.0	-42	True	AATAAA	-18
PB.627.9	chr1	-	3655	21	full-splice_match	PTPN22	ENST00000359785.9	3654	21	-4	3	-4	1	multi-exon	FALSE	canonical	1	56189	junction_14	29933.182013402784	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	141	2564	20.0	-52	True	AATAAA	-18
PB.10017.10	chr6	-	2523	5	novel_in_catalog	NFKBIE	novel	2581	6	NA	NA	45	-2	intron_retention	FALSE	canonical	1	171955	junction_4	108250.79083544841	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	1322	1999	35.0	-1	True	ACTAAA	-14
PB.7308.8	chr20	+	1947	6	full-splice_match	YWHAB	ENST00000353703.8	3049	6	21	1081	-5	931	multi-exon	FALSE	canonical	1	1649071	junction_1	644481.5878708716	NA	3	NA	TRUE	NA	NA	NA	C	coding	246	741	194	934	85.0	-20	True	NA	NA
PB.3526.7	chr14	+	4797	7	full-splice_match	SLC39A9	ENST00000555245.5	1531	7	44	-3310	40	0	multi-exon	FALSE	canonical	1	3152	junction_1	127864.90082461602	NA	4	NA	TRUE	NA	NA	NA	C	coding	189	570	433	1002	25.0	-577	False	ATTAAA	-21
PB.3083.10	chr13	-	2984	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	726	674	726	-674	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	421	774	40.0	748	False	AATAAA	-16
PB.3083.13	chr13	-	3341	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	305	738	305	-738	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	842	1195	25.0	327	False	AATATA	-14
PB.3083.12	chr13	-	3260	4	novel_in_catalog	UBL3	novel	4384	5	NA	NA	341	-674	no_combination_of_known_junctions	FALSE	canonical	1	2314	junction_3	282039.8996079968	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-16
PB.3083.15	chr13	-	3149	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	347	888	347	-888	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	4	NA	TRUE	NA	NA	NA	C	coding	117	354	800	1153	50.0	5	True	ATTAAA	-21
PB.3526.2	chr14	+	2886	7	novel_in_catalog	SLC39A9	novel	944	5	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	19750	junction_1	122004.38394718993	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	359	928	15.0	-656	False	AATAAA	-18
PB.3083.17	chr13	-	2752	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	367	1265	367	-1265	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	3	NA	TRUE	NA	NA	NA	C	coding	117	354	780	1133	75.0	25	True	ACTAAA	-45
PB.3083.16	chr13	-	2390	5	novel_not_in_catalog	UBL3	novel	4384	5	NA	NA	8573	-887	any annotated donor/acceptor	FALSE	canonical	1	96	junction_4	253614.19736321448	NA	2	NA	TRUE	NA	NA	NA	C	coding	73	222	172	393	50.0	8595	False	ATTAAA	-22
PB.3083.19	chr13	-	2124	5	novel_not_in_catalog	UBL3	novel	4384	5	NA	NA	8485	-1241	any annotated donor/acceptor	FALSE	canonical	1	96	junction_4	253614.19736321448	NA	6	NA	TRUE	NA	NA	NA	C	coding	135	408	74	481	30.0	8507	False	AATAAA	-17
PB.3083.18	chr13	-	2693	4	novel_in_catalog	UBL3	novel	4384	5	NA	NA	341	-1241	no_combination_of_known_junctions	FALSE	canonical	1	2314	junction_3	282039.8996079968	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-17
PB.5949.6	chr19	-	3955	3	novel_in_catalog	ZNF260	novel	5666	3	NA	NA	-22	-630	combination_of_known_junctions	FALSE	canonical	1	10155	junction_1	30050.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	1135	2364	25.0	0	True	NA	NA
PB.5949.7	chr19	-	3552	3	full-splice_match	ZNF260	ENST00000523638.5	5666	3	393	1721	1	-637	multi-exon	FALSE	canonical	1	63171	junction_1	3542.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	739	1968	30.0	-1	True	NA	NA
PB.5949.1	chr19	-	5262	3	novel_in_catalog	ZNF260	novel	5666	3	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	1	10155	junction_1	30050.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	720	1949	15.0	-1	True	NA	NA
PB.3526.9	chr14	+	3379	6	full-splice_match	SLC39A9	ENST00000031146.8	5192	6	-14	1827	-12	3	multi-exon	FALSE	canonical	1	36215	junction_2	124373.48753074347	NA	9	NA	TRUE	NA	NA	NA	C	coding	241	726	693	1418	15.0	-329	False	AATAAA	-21
PB.3526.8	chr14	+	2448	8	full-splice_match	SLC39A9	ENST00000555840.5	2377	8	-66	-5	-18	-2	multi-exon	FALSE	canonical	1	15460	junction_7	114577.1165914388	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	699	1622	25.0	-335	False	ATTAAA	-19
PB.8296.4	chr3	+	1625	7	full-splice_match	SLC35A5	ENST00000492406.5	4399	7	38	2736	11	111	multi-exon	FALSE	canonical	1	181386	junction_1	27621.04910762	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	246	1520	30.0	0	True	GATAAA	-21
PB.8296.5	chr3	+	2979	8	novel_not_in_catalog	SLC35A5	novel	575	6	NA	NA	12	-1	intron_retention	FALSE	canonical	1	108	junction_5	96372.30428427673	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	976	1560	10.0	1	True	ATTAAA	-16
PB.8296.6	chr3	+	2465	8	full-splice_match	SLC35A5	ENST00000261034.6	2444	8	-23	2	12	-2	multi-exon	FALSE	canonical	1	4638	junction_6	77445.18999306041	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	245	952	10.0	1	True	ATTAAA	-15
PB.8296.7	chr3	+	2876	7	full-splice_match	SLC35A5	ENST00000492406.5	4399	7	102	1421	40	0	multi-exon	FALSE	canonical	1	181386	junction_1	27621.04910762	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	182	1456	5.0	0	True	ATTAAA	-17
PB.8296.1	chr3	+	2864	7	novel_in_catalog	SLC35A5	novel	575	6	NA	NA	-37	-1	intron_retention	FALSE	canonical	1	6427	junction_1	83004.68393410098	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	171	1445	10.0	-514	False	ATTAAA	-16
PB.8296.2	chr3	+	2905	7	novel_in_catalog	SLC35A5	novel	575	6	NA	NA	11	-1	intron_retention	FALSE	canonical	1	2884	junction_1	84271.50789116093	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	212	1486	10.0	0	True	ATTAAA	-16
PB.8296.3	chr3	+	2402	8	novel_in_catalog	SLC35A5	novel	575	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	4683	junction_6	77430.3266458937	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	246	887	5.0	0	True	ATTAAA	-17
PB.6454.2	chr2	+	3553	17	incomplete-splice_match	TTC7A	ENST00000319190.9	5157	20	32	24889	32	419	3prime_fragment	FALSE	canonical	1	208758	junction_11	41127.71987054473	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	337	2505	15.0	-23	True	AATAAA	-18
PB.2864.1	chr12	+	2331	11	novel_in_catalog	TCP11L2	novel	1788	7	NA	NA	-5	-20	combination_of_known_junctions	FALSE	canonical	1	12725	junction_3	60324.27193128815	NA	1	NA	TRUE	NA	NA	NA	A	coding	454	1365	502	1866	50.0	-1	True	AATAAA	-12
PB.6454.3	chr2	+	4543	20	full-splice_match	TTC7A	ENST00000319190.9	5157	20	36	578	36	0	multi-exon	FALSE	canonical	1	142388	junction_17	49681.081408544625	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2577	333	2909	25.0	-19	True	AATAAA	-24
PB.8383.3	chr3	+	2546	18	novel_in_catalog	ACAD9	novel	553	2	NA	NA	3	0	intron_retention	FALSE	canonical	1	26083	junction_9	134776.59935311583	NA	2	2	TRUE	NA	NA	NA	C	coding	273	822	1318	2139	20.0	-21	True	AAGAAA	-15
PB.7155.8	chr20	+	1843	2	incomplete-splice_match	PANK2	ENST00000621507.1	1763	7	27748	2	-7254	-2	5prime_fragment	FALSE	canonical	1	359662	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.324.2	chr1	+	2491	10	full-splice_match	SMAP2	ENST00000372708.5	2473	10	-18	0	-18	0	multi-exon	FALSE	canonical	1	17691	junction_1	327262.3344967259	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	67	1266	10.0	-10004	False	AATAAA	-17
PB.1332.4	chr10	+	2845	12	incomplete-splice_match	KIAA1217	ENST00000376456.8	3203	13	349	3180	-24	-3180	3prime_fragment	FALSE	canonical	1	41564	junction_1	37021.50857238541	NA	0	NA	TRUE	NA	NA	NA	B	coding	930	2790	55	2844	20.0	1	True	AAGAAA	-40
PB.1332.5	chr10	+	2701	11	novel_not_in_catalog	KIAA1217	novel	6123	19	NA	NA	16140	-3178	any annotated donor/acceptor	FALSE	canonical	1	14048	junction_1	40932.60044805363	NA	1	NA	TRUE	NA	NA	NA	B	coding	852	2556	146	2701	15.0	7	True	AAGAAA	-42
PB.7155.7	chr20	+	1464	7	full-splice_match	PANK2	ENST00000336066.7	1843	7	27	352	1	-128	multi-exon	FALSE	canonical	1	170604	junction_2	84529.29317780251	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	55	531	25.0	29	True	ATTAAA	-12
PB.7155.6	chr20	+	1838	5	incomplete-splice_match	PANK2	ENST00000336066.7	1843	7	26	6046	0	759	3prime_fragment	FALSE	canonical	1	170604	junction_2	100017.23064802385	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	56	532	20.0	28	True	ATTAAA	-17
PB.4373.6	chr16	-	2327	3	novel_in_catalog	AC002310.5	novel	1515	4	NA	NA	-118	-5536	no_combination_of_known_junctions	FALSE	canonical	1	33378	junction_1	3242.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	331	996	292	1287	10.0	0	True	NA	NA
PB.1332.1	chr10	+	3824	17	incomplete-splice_match	KIAA1217	ENST00000458595.5	5977	18	348	2528	-25	4	3prime_fragment	FALSE	canonical	1	40925	junction_16	39421.83582533726	NA	0	NA	TRUE	NA	NA	NA	B	coding	1188	3567	56	3622	40.0	0	True	AATAAA	-23
PB.1332.2	chr10	+	3922	16	novel_in_catalog	KIAA1217	novel	6123	19	NA	NA	124	-2	combination_of_known_junctions	FALSE	canonical	1	14416	junction_15	43802.7279891206	NA	0	NA	TRUE	NA	NA	NA	B	coding	1148	3447	280	3726	35.0	0	True	AATAAA	-17
PB.1332.3	chr10	+	2822	3	novel_not_in_catalog	KIAA1217	novel	6123	19	NA	NA	131	-63763	any annotated donor/acceptor	FALSE	canonical	1	1770	junction_2	19897.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	125	378	273	650	15.0	7	True	AATAAA	-16
PB.1475.4	chr10	+	2589	4	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-9	1091	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	97433.72806511442	NA	8	NA	TRUE	NA	NA	NA	C	coding	492	1479	53	1531	80.0	-21	True	NA	NA
PB.1047.3	chr1	+	2660	3	novel_not_in_catalog	BTG2	novel	1275	3	NA	NA	-18	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	628646.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	90	593	25.0	-1	True	AATAAA	-11
PB.1475.6	chr10	+	1981	3	full-splice_match	FUT11	ENST00000372841.7	2056	3	4	71	4	-68	multi-exon	FALSE	canonical	1	121391	junction_1	58630.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	40	1518	35.0	-8	True	TATAAA	-22
PB.1475.7	chr10	+	2449	2	incomplete-splice_match	FUT11	ENST00000394790.2	2175	3	232	1097	-41	-4	3prime_fragment	FALSE	canonical	1	121391	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	403	1149	30.0	-9527	False	AATAAA	-22
PB.1475.2	chr10	+	2666	4	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-14	1091	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	97433.72806511442	NA	3	1	TRUE	NA	NA	NA	C	coding	492	1479	58	1536	80.0	-26	True	NA	NA
PB.1475.3	chr10	+	2255	4	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-14	-1178	any annotated donor/acceptor	FALSE	canonical	1	10785	junction_3	93039.12485974202	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	58	1536	95.0	-26	True	NA	NA
PB.10864.26	chr7	-	2109	3	novel_not_in_catalog	WDR91	novel	4500	15	NA	NA	4746	-17	intron_retention	FALSE	canonical	1	29	junction_2	121380.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	9429	False	NA	NA
PB.324.7	chr1	+	2027	5	incomplete-splice_match	SMAP2	ENST00000539317.2	2501	10	17358	-2	181	0	5prime_fragment	FALSE	canonical	1	839258	junction_1	125227.23527327232	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	65	802	10.0	-8713	False	AATAAA	-17
PB.10864.24	chr7	-	2654	15	full-splice_match	WDR91	ENST00000354475.4	4588	15	1	1933	1	10	multi-exon	FALSE	canonical	1	108881	junction_10	40237.88265802539	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	32	2275	15.0	-16	True	AAAAAG	-19
PB.10864.25	chr7	-	2578	15	novel_not_in_catalog	WDR91	novel	4500	15	NA	NA	15	1	any annotated donor/acceptor	FALSE	canonical	1	4642	junction_5	59358.56433023745	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	18	1712	5.0	-2	True	AAAAAG	-10
PB.1475.8	chr10	+	2429	4	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-52	1091	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	97433.72806511442	NA	9	NA	TRUE	NA	NA	NA	C	coding	295	888	414	1301	80.0	-9538	False	NA	NA
PB.1475.9	chr10	+	2435	3	novel_in_catalog	FUT11	novel	2175	3	NA	NA	435	1091	combination_of_known_junctions	FALSE	canonical	1	20981	junction_1	108835.0	NA	7	1	TRUE	NA	NA	NA	C	coding	204	615	196	810	80.0	22	True	NA	NA
PB.10864.20	chr7	-	3914	14	novel_in_catalog	WDR91	novel	4500	15	NA	NA	8	14	intron_retention	FALSE	canonical	1	108881	junction_9	41623.23582131363	NA	2	1	TRUE	NA	NA	NA	C	coding	673	2022	25	2046	15.0	-9	True	AAAAAG	-23
PB.10864.21	chr7	-	3600	15	full-splice_match	WDR91	ENST00000466182.5	3594	15	8	-14	8	14	multi-exon	FALSE	canonical	1	25692	junction_8	54312.77955471607	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	2207	3217	15.0	-9	True	AAAAAG	-23
PB.8383.5	chr3	+	2432	18	full-splice_match	ACAD9	ENST00000308982.11	2454	18	21	1	3	-1	multi-exon	FALSE	canonical	1	210046	junction_1	70906.24839036295	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	61	1926	15.0	12	True	TATAAA	-23
PB.6723.1	chr2	+	3084	4	intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	225	junction_2	1059.088392072268	NA	0	NA	FALSE	NA	NA	NA	A	coding	70	213	109	321	70.0	-1	True	AATACA	-10
PB.8383.4	chr3	+	2602	19	novel_not_in_catalog	ACAD9	novel	553	2	NA	NA	1	3	intron_retention	FALSE	canonical	1	3301	junction_17	141580.11645298044	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	88	2019	15.0	-15	True	TATAAA	-17
PB.3518.1	chr14	+	2944	7	full-splice_match	RAD51B	ENST00000390683.7	922	7	-23	-1999	10	1775	multi-exon	FALSE	canonical	1	64330	junction_4	10124.164449748709	NA	0	NA	TRUE	NA	NA	NA	A	coding	279	840	68	907	80.0	10	True	TTTAAA	-35
PB.11394.2	chr8	-	2475	9	novel_not_in_catalog	SHARPIN	novel	533	3	NA	NA	-635	-1	any annotated donor/acceptor	FALSE	canonical	1	5156	junction_6	244924.98506787745	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	1152	2312	25.0	-16	True	ATTAAA	-15
PB.1047.4	chr1	+	3024	3	novel_not_in_catalog	BTG2	novel	1275	3	NA	NA	-17	3305	intron_retention	FALSE	non_canonical	0	0	junction_2	628646.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	89	565	95.0	0	True	NA	NA
PB.2684.2	chr12	+	7095	14	full-splice_match	RBMS2	ENST00000262031.9	8382	14	-118	1405	-118	-1405	multi-exon	FALSE	canonical	1	58	junction_5	16371.177926772989	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	214	1437	20.0	-20	True	AATAAA	-19
PB.2684.1	chr12	+	1916	14	full-splice_match	RBMS2	ENST00000262031.9	8382	14	-125	6591	-125	10	multi-exon	FALSE	canonical	1	58	junction_5	16371.177926772989	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	221	1444	25.0	-27	True	AAAACA	-43
PB.8890.5	chr4	+	2541	10	novel_in_catalog	METAP1	novel	2791	11	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	23477	junction_8	163825.95764845112	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	34	1050	30.0	0	True	ATTAAA	-20
PB.10821.8	chr7	+	5480	16	incomplete-splice_match	SND1	ENST00000354725.7	3476	24	-14	98058	-14	-3527	3prime_fragment	FALSE	canonical	1	765848	junction_1	336666.2434387703	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	209	2107	100.0	0	True	NA	NA
PB.10821.9	chr7	+	3271	23	novel_in_catalog	SND1	novel	3476	24	NA	NA	-13	-14	no_combination_of_known_junctions	FALSE	canonical	1	3149	junction_21	527520.8318840171	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	208	2736	20.0	1	True	AATAAA	-20
PB.10291.18	chr6	-	3573	7	incomplete-splice_match	IPCEF1	ENST00000519344.5	1621	9	-6	37487	-6	2554	3prime_fragment	FALSE	canonical	1	67787	junction_6	7618.215663059749	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	252	1112	25.0	-1	True	AATAAA	-25
PB.10821.2	chr7	+	3378	23	novel_in_catalog	SND1	novel	3476	24	NA	NA	-32	-16	no_combination_of_known_junctions	FALSE	canonical	1	5381	junction_9	522502.24821983796	NA	2	NA	TRUE	NA	NA	NA	C	coding	872	2619	227	2845	25.0	0	True	AATAAA	-18
PB.10821.3	chr7	+	3458	25	novel_not_in_catalog	SND1	novel	3476	24	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	512616.86861614074	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	253	2910	25.0	3	True	AATAAA	-33
PB.10821.1	chr7	+	3625	24	novel_in_catalog	SND1	novel	3476	24	NA	NA	-32	-16	combination_of_known_junctions	FALSE	canonical	1	7368	junction_22	515574.01335133833	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	227	2962	25.0	0	True	AATAAA	-18
PB.10821.6	chr7	+	3234	24	full-splice_match	SND1	ENST00000354725.7	3476	24	240	2	226	-2	multi-exon	FALSE	canonical	1	765848	junction_1	380274.2518056462	NA	1	NA	TRUE	NA	NA	NA	C	coding	885	2658	30	2687	25.0	226	False	AATAAA	-32
PB.10821.7	chr7	+	3380	23	novel_in_catalog	SND1	novel	3476	24	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	1	3054	junction_15	523271.4978302569	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	210	2084	25.0	-1	True	AATAAA	-33
PB.10821.4	chr7	+	3579	25	novel_not_in_catalog	SND1	novel	3476	24	NA	NA	-18	-5	any annotated donor/acceptor	FALSE	canonical	1	246	junction_12	613973.6983295769	NA	13	2	TRUE	NA	NA	NA	C	coding	940	2823	213	3035	25.0	-4	True	AATAAA	-29
PB.10821.5	chr7	+	3591	25	novel_not_in_catalog	SND1	novel	3476	24	NA	NA	-18	-15	any annotated donor/acceptor	FALSE	canonical	1	3558	junction_11	610848.5854521341	NA	14	2	TRUE	NA	NA	NA	C	coding	512	1539	1519	3057	25.0	-4	True	AATAAA	-19
PB.2859.7	chr12	+	4702	33	full-splice_match	WASHC4	ENST00000332180.9	5812	33	17	1093	16	1041	multi-exon	FALSE	canonical	1	241415	junction_12	61739.53916694613	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	71	3592	55.0	0	True	AATAAA	-23
PB.2859.6	chr12	+	3303	25	full-splice_match	WASHC4	ENST00000311317.8	2897	25	15	-421	14	421	multi-exon	FALSE	canonical	1	13528	junction_24	81141.1237649048	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	73	2628	15.0	-2	True	AATAAA	-24
PB.2859.5	chr12	+	3361	31	novel_in_catalog	WASHC4	novel	576	7	NA	NA	14	-19	no_combination_of_known_junctions	FALSE	canonical	1	11646	junction_24	86602.88114604246	NA	0	NA	TRUE	NA	NA	NA	C	coding	1096	3288	73	3360	75.0	-2	True	NA	NA
PB.2859.4	chr12	+	3030	29	novel_in_catalog	WASHC4	novel	576	7	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	1	5813	junction_1	80826.81047962952	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2715	315	3029	80.0	-3	True	NA	NA
PB.2859.3	chr12	+	3371	31	novel_in_catalog	WASHC4	novel	576	7	NA	NA	9	-9	combination_of_known_junctions	FALSE	canonical	1	5813	junction_1	87053.20487041245	NA	2	1	TRUE	NA	NA	NA	C	coding	1017	3051	319	3369	65.0	-7	True	AAGAAA	-5
PB.2859.2	chr12	+	5659	32	novel_in_catalog	WASHC4	novel	576	7	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	5813	junction_1	85683.66976196345	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3141	324	3464	25.0	-12	True	AATAAA	-11
PB.2859.1	chr12	+	6158	33	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	2	0	any annotated donor/acceptor	TRUE	canonical	1	6949	junction_32	86000.41318484955	NA	1	NA	TRUE	NA	NA	NA	C	coding	1163	3492	85	3576	10.0	-14	True	AATAAA	-19
PB.11488.11	chr9	-	3469	2	novel_not_in_catalog	CAAP1	novel	2791	6	NA	NA	-1	-15170	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	133	402	91	492	100.0	-4	True	NA	NA
PB.8773.18	chr4	+	3201	10	full-splice_match	DCUN1D4	ENST00000381441.7	4207	10	110	896	20	-894	multi-exon	FALSE	canonical	1	55642	junction_8	90023.69940942232	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	71	844	20.0	20	True	AATAAA	-22
PB.9271.5	chr5	+	4773	9	full-splice_match	OCLN	ENST00000396442.6	1748	9	-27	-2998	-27	-1435	multi-exon	FALSE	canonical	1	926	junction_5	48148.070117087766	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	207	1775	35.0	-27	False	AATAAA	-25
PB.2859.9	chr12	+	5795	33	full-splice_match	WASHC4	ENST00000332180.9	5812	33	17	0	16	0	multi-exon	FALSE	canonical	1	241415	junction_12	61739.53916694613	NA	1	NA	TRUE	NA	NA	NA	C	coding	1173	3522	71	3592	10.0	0	True	AATAAA	-19
PB.2859.8	chr12	+	3351	24	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	16	0	intron_retention	FALSE	canonical	1	3794	junction_10	83848.5872427717	NA	2	NA	TRUE	NA	NA	NA	C	coding	433	1302	1324	2625	90.0	0	True	NA	NA
PB.11222.15	chr8	-	3181	7	novel_not_in_catalog	MMP16	novel	11558	10	NA	NA	-166	-43666	any annotated donor/acceptor	FALSE	canonical	1	172	junction_1	16463.201156923682	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	449	1561	50.0	3	True	AATAAA	-17
PB.10186.6	chr6	+	2025	2	full-splice_match	PLN	ENST00000357525.5	2001	2	-2	-22	-2	22	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-2	True	AATAAA	-26
PB.7893.6	chr22	-	1900	2	novel_in_catalog	TYMP	novel	1608	10	NA	NA	12	-169	intron_retention	FALSE	canonical	1	390238	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	528	1139	90.0	9655	False	NA	NA
PB.7893.4	chr22	-	2221	1	novel_in_catalog	TYMP	novel	1604	10	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	203	612	680	1291	100.0	-1	True	NA	NA
PB.7893.5	chr22	-	2082	1	novel_in_catalog	TYMP	novel	1630	10	NA	NA	-10	-169	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	203	612	710	1321	90.0	9657	False	NA	NA
PB.7893.2	chr22	-	1831	9	full-splice_match	TYMP	ENST00000487577.5	1751	9	-80	0	-20	0	multi-exon	FALSE	canonical	1	314426	junction_2	226475.97577392176	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	368	1816	20.0	9623	False	AATAAA	-15
PB.7893.3	chr22	-	1615	10	full-splice_match	TYMP	ENST00000252029.7	1630	10	12	3	12	0	multi-exon	FALSE	canonical	1	314426	junction_2	236624.4569110918	NA	1	1	TRUE	NA	NA	NA	C	coding	482	1449	152	1600	20.0	9655	False	AATAAA	-15
PB.7893.1	chr22	-	2497	7	novel_in_catalog	SCO2	novel	1002	2	NA	NA	-3573	-1753	intron_retention	TRUE	canonical	1	314426	junction_2	259011.85058710258	NA	0	NA	TRUE	NA	NA	NA	B	coding	289	870	304	1173	20.0	-1	True	AATAAA	-15
PB.10291.11	chr6	-	3506	10	novel_not_in_catalog	IPCEF1	novel	498	2	NA	NA	36	241	any annotated donor/acceptor	FALSE	canonical	1	16	junction_2	37647.274881457226	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	1117	1767	20.0	7	True	AATAGA	-15
PB.6733.2	chr2	-	4910	8	full-splice_match	AMMECR1L	ENST00000272647.9	4658	8	-258	6	-258	1	multi-exon	FALSE	canonical	1	70418	junction_5	39749.48910671555	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	520	1452	25.0	-1813	False	AATAAA	-11
PB.6733.4	chr2	-	4373	5	novel_in_catalog	AMMECR1L	novel	4658	8	NA	NA	-37	2	no_combination_of_known_junctions	FALSE	canonical	1	12940	junction_2	67526.95550667155	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	299	706	25.0	-1592	False	AATAAA	-12
PB.6733.5	chr2	-	4570	7	novel_in_catalog	AMMECR1L	novel	4658	8	NA	NA	-29	1	no_combination_of_known_junctions	FALSE	canonical	1	7848	junction_4	56630.43420870678	NA	2	NA	TRUE	NA	NA	NA	C	coding	273	822	291	1112	25.0	-1584	False	AATAAA	-11
PB.6733.6	chr2	-	4551	6	novel_in_catalog	AMMECR1L	novel	4658	8	NA	NA	-105	1	no_combination_of_known_junctions	FALSE	canonical	1	2977	junction_2	64949.9675578056	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	367	936	25.0	-1660	False	AATAAA	-11
PB.3324.3	chr14	-	2950	9	full-splice_match	SLC7A8	ENST00000453702.5	1752	9	17	-1215	9	-151	multi-exon	FALSE	canonical	1	39129	junction_8	98595.42549661914	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	228	1226	15.0	8	True	GATAAA	-17
PB.3324.2	chr14	-	3128	9	full-splice_match	SLC7A8	ENST00000529705.6	1819	9	140	-1449	-9	0	multi-exon	FALSE	canonical	1	5128	junction_8	109290.57874080456	NA	2	1	TRUE	NA	NA	NA	C	coding	332	999	255	1253	25.0	1	True	AATAAA	-12
PB.3324.1	chr14	-	3130	9	full-splice_match	SLC7A8	ENST00000453702.5	1752	9	-12	-1366	-12	0	multi-exon	FALSE	canonical	1	39129	junction_8	98595.42549661914	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	257	1255	25.0	906	False	AATAAA	-12
PB.8793.3	chr4	-	3634	11	novel_in_catalog	PPAT	novel	3682	11	NA	NA	-39	-1	combination_of_known_junctions	TRUE	canonical	1	17328	junction_9	67516.06293386781	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	542	1648	20.0	-43	False	GATAAA	-20
PB.5662.2	chr19	+	6260	30	novel_in_catalog	AC119396.1	novel	1558	10	NA	NA	200	89099	no_combination_of_known_junctions	FALSE	canonical	1	59105	junction_29	97530.37377750353	NA	0	NA	TRUE	NA	NA	NA	B	coding	1361	4086	210	4295	10.0	-15	True	AATAAA	-21
PB.5662.3	chr19	+	5205	21	full-splice_match	ARHGEF18	ENST00000319670.13	5212	21	7	0	7	0	multi-exon	FALSE	canonical	1	59105	junction_20	70542.21412204186	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	200	3247	15.0	-25	True	AATAAA	-14
PB.5662.1	chr19	+	6581	29	novel_in_catalog	AC119396.1	novel	1558	10	NA	NA	100	89099	intron_retention	FALSE	canonical	1	63923	junction_10	95147.41714434394	NA	2	NA	TRUE	NA	NA	NA	B	coding	1361	4086	310	4395	10.0	1	True	AATAAA	-21
PB.5662.6	chr19	+	5334	21	novel_in_catalog	AC008878.3	novel	4964	22	NA	NA	12312	0	no_combination_of_known_junctions	FALSE	canonical	1	24526	junction_1	81441.10451134303	NA	0	NA	TRUE	NA	NA	NA	B	coding	987	2964	413	3376	15.0	1	True	AATAAA	-14
PB.1642.1	chr10	-	6583	2	full-splice_match	ITPRIP	ENST00000337478.2	4093	2	-58	-2432	-14	-1	multi-exon	FALSE	canonical	1	136784	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	231	1874	15.0	2	True	NA	NA
PB.1642.2	chr10	-	4199	2	full-splice_match	ITPRIP	ENST00000337478.2	4093	2	-111	5	-67	-5	multi-exon	FALSE	canonical	1	136784	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	284	1927	25.0	170	False	ATTAAA	-26
PB.1642.3	chr10	-	3978	2	full-splice_match	ITPRIP	ENST00000337478.2	4093	2	-59	174	-15	-148	multi-exon	FALSE	canonical	1	136784	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	232	1875	50.0	1	True	NA	NA
PB.3081.13	chr13	-	6923	13	full-splice_match	SLC7A1	ENST00000380752.9	7347	13	44	380	44	-380	multi-exon	FALSE	canonical	1	147488	junction_12	69662.88407768396	NA	8	NA	TRUE	NA	NA	NA	C	coding	629	1890	344	2233	40.0	-9	True	AGTAAA	-15
PB.2430.1	chr12	-	3669	8	novel_in_catalog	CDCA3	novel	2760	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	22006	junction_2	166039.89887705314	NA	0	NA	TRUE	NA	NA	NA	B	coding	268	807	129	935	15.0	-22	True	NA	NA
PB.2430.2	chr12	-	3650	8	novel_in_catalog	CDCA3	novel	2760	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	22006	junction_2	184367.52072478514	NA	0	NA	TRUE	NA	NA	NA	B	coding	190	573	130	702	20.0	-23	True	NA	NA
PB.2430.3	chr12	-	4824	7	novel_in_catalog	CDCA3	novel	2760	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	53950	junction_1	132173.78053584942	NA	1	NA	TRUE	NA	NA	NA	B	coding	268	807	131	937	20.0	-24	True	NA	NA
PB.2430.4	chr12	-	3514	8	novel_in_catalog	CDCA3	novel	2760	5	NA	NA	0	-91	combination_of_known_junctions	FALSE	canonical	1	22006	junction_2	166039.89887705314	NA	0	NA	TRUE	NA	NA	NA	B	coding	268	807	129	935	25.0	-22	True	NA	NA
PB.2507.1	chr12	-	2557	1	antisense	novelGene_ETNK1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8773.11	chr4	+	4115	10	full-splice_match	DCUN1D4	ENST00000381441.7	4207	10	90	2	0	0	multi-exon	FALSE	canonical	1	55642	junction_8	90023.69940942232	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	91	864	35.0	0	True	AATAAA	-23
PB.8773.12	chr4	+	3826	10	full-splice_match	DCUN1D4	ENST00000381441.7	4207	10	90	291	0	-289	multi-exon	FALSE	canonical	1	55642	junction_8	90023.69940942232	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	91	864	25.0	0	True	AATAAA	-23
PB.272.2	chr1	+	3455	8	novel_in_catalog	ZSCAN20	novel	4316	8	NA	NA	4	-855	combination_of_known_junctions	FALSE	canonical	1	12293	junction_1	4961.03376323927	NA	1	NA	TRUE	NA	NA	NA	C	coding	1043	3132	148	3279	25.0	4	True	NA	NA
PB.2751.27	chr12	+	5187	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	185073.32280379138	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	85	1545	35.0	-2	True	AATAAA	-26
PB.2751.26	chr12	+	3064	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-2	4	intron_retention	FALSE	non_canonical	0	0	junction_11	217648.36155380437	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	85	1545	40.0	-2	True	AATAAA	-18
PB.2751.25	chr12	+	3327	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	216746.424886878	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	85	1593	35.0	-2	True	AATAAA	-26
PB.2751.24	chr12	+	2182	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	19	322	-3	269	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	86	1546	25.0	-3	True	TATAAA	-14
PB.2751.23	chr12	+	3280	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	217648.36155380437	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	103	1563	35.0	-7820	False	AATAAA	-26
PB.2751.22	chr12	+	4332	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	21	-1830	-1	-1544	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	84	1544	40.0	-1	True	CATAAA	-19
PB.2751.21	chr12	+	5526	13	novel_in_catalog	MDM2	novel	12633	11	NA	NA	0	-2	intron_retention	FALSE	canonical	1	6476	junction_3	242407.05628440814	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	105	1658	35.0	-7822	False	AATAAA	-26
PB.2751.20	chr12	+	2192	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-5	22808	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	185073.32280379138	NA	5	1	TRUE	NA	NA	NA	C	coding	486	1461	110	1570	60.0	-7827	False	NA	NA
PB.4407.1	chr16	-	2584	5	novel_not_in_catalog	C16orf87	novel	6640	3	NA	NA	-59	-84	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	109168.67482478662	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	73	537	45.0	-1	True	AATAAA	-13
PB.4407.2	chr16	-	2722	5	novel_not_in_catalog	C16orf87	novel	6640	3	NA	NA	-39	-85	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	109168.67482478662	NA	2	1	TRUE	NA	NA	NA	C	coding	154	465	53	517	50.0	263	False	AATAAA	-12
PB.4407.3	chr16	-	1415	4	full-splice_match	C16orf87	ENST00000285697.8	1585	4	227	-57	-22	57	multi-exon	FALSE	canonical	1	168840	junction_1	48434.90315418784	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	36	500	45.0	-5	True	AATAAA	-26
PB.4407.4	chr16	-	1503	3	full-splice_match	C16orf87	ENST00000394806.6	6640	3	-303	5440	-54	47	multi-exon	FALSE	canonical	1	46990	junction_1	119525.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-16
PB.11368.5	chr8	+	2236	4	novel_in_catalog	AC138696.1	novel	2897	4	NA	NA	20335	526	no_combination_of_known_junctions	FALSE	canonical	1	15825	junction_2	11232.397379406095	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	966	2111	20.0	0	True	AATAAA	-18
PB.2751.29	chr12	+	3254	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	22	-753	0	753	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	45.0	0	True	NA	NA
PB.2751.28	chr12	+	5887	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	22	-3386	0	-2	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	6	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	35.0	0	True	AATAAA	-26
PB.11020.11	chr8	+	2293	14	novel_not_in_catalog	PPP3CC	novel	1598	8	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	27033	junction_8	98854.64116324935	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	331	1308	30.0	2	True	AATAAA	-38
PB.11342.1	chr8	-	2717	3	novel_in_catalog	CCDC26	novel	1721	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	1132	junction_2	103.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	174	525	1262	1786	10.0	9017	False	NA	NA
PB.11368.3	chr8	+	3568	4	full-splice_match	AC138696.1	ENST00000522452.1	2897	4	-145	-526	-145	526	multi-exon	FALSE	canonical	1	7085	junction_2	30220.873959713488	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	940	1536	20.0	26	True	AATAAA	-18
PB.10085.1	chr6	-	3326	14	full-splice_match	ME1	ENST00000369705.3	3371	14	9	36	9	-36	multi-exon	TRUE	canonical	1	167834	junction_13	54395.36702480565	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	109	1827	70.0	-18	True	ATTAAA	-19
PB.10085.2	chr6	-	2164	14	full-splice_match	ME1	ENST00000369705.3	3371	14	18	1189	18	-1189	multi-exon	FALSE	canonical	1	167834	junction_13	54395.36702480565	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	100	1818	30.0	-9	True	AATAAA	-25
PB.4874.7	chr17	-	3634	6	novel_in_catalog	SSH2	novel	9327	15	NA	NA	-62	-41	intron_retention	FALSE	canonical	1	89490	junction_5	40879.14909779801	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	203	760	80.0	-1	True	NA	NA
PB.1161.6	chr1	-	1785	7	novel_not_in_catalog	AL117348.2	novel	1625	8	NA	NA	-16	-33190	intron_retention	FALSE	canonical	1	85	junction_5	441243.30053825054	NA	6	NA	TRUE	NA	NA	NA	B	coding	273	822	395	1216	25.0	-45	True	AATAAA	-10
PB.6945.2	chr2	-	6481	16	full-splice_match	TRAK2	ENST00000332624.7	6510	16	28	1	28	-1	multi-exon	TRUE	canonical	1	117443	junction_15	57181.09746698545	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	402	3146	5.0	-2	True	AATAAA	-21
PB.10667.11	chr7	-	2953	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	30	227	30	-227	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	137	1666	30.0	8451	False	AATAAA	-21
PB.6945.7	chr2	-	3787	16	full-splice_match	TRAK2	ENST00000332624.7	6510	16	104	2619	-22	-2619	multi-exon	FALSE	canonical	1	117443	junction_15	57181.09746698545	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	326	3070	65.0	-21	True	AATAAA	-38
PB.6945.6	chr2	-	4262	16	full-splice_match	TRAK2	ENST00000332624.7	6510	16	14	2234	14	-2234	multi-exon	FALSE	canonical	1	117443	junction_15	57181.09746698545	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	416	3160	10.0	-16	True	ATTAAA	-39
PB.1161.4	chr1	-	3703	3	novel_in_catalog	AL117348.2	novel	1625	8	NA	NA	-20	-33189	intron_retention	FALSE	canonical	1	1073528	junction_2	199922.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	143	432	1919	2350	25.0	-49	True	AATAAA	-11
PB.10200.12	chr6	+	3090	6	full-splice_match	NCOA7	ENST00000438495.6	3133	6	42	1	-39	-1	multi-exon	FALSE	canonical	1	204396	junction_1	89407.1873294312	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	92	751	25.0	11	True	AATAAA	-20
PB.6984.20	chr2	-	4994	3	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	2962	-422011	any annotated donor/acceptor	FALSE	canonical	1	472	junction_2	49395.0	NA	8	NA	TRUE	NA	NA	NA	B	coding	286	861	142	1002	70.0	3836	False	AATGAA	-33
PB.9838.1	chr6	+	2770	2	full-splice_match	PPP1R11	ENST00000376758.1	1723	2	-1051	4	-50	-4	multi-exon	FALSE	canonical	1	503916	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	AATAAA	-15
PB.3319.2	chr14	-	3272	8	full-splice_match	AJUBA	ENST00000262713.6	4262	8	349	641	45	0	multi-exon	FALSE	canonical	1	231372	junction_7	74573.17830897408	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	28	1644	15.0	348	False	AATAAA	-17
PB.3319.1	chr14	-	3689	8	full-splice_match	AJUBA	ENST00000262713.6	4262	8	551	22	247	-22	multi-exon	FALSE	canonical	1	231372	junction_7	74573.17830897408	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	324	1442	35.0	550	False	ATTAAA	-19
PB.9838.2	chr6	+	1736	4	full-splice_match	PPP1R11	ENST00000376769.6	1689	4	-50	3	-50	-3	multi-exon	FALSE	canonical	1	24613	junction_1	224507.9914009497	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-16
PB.6984.27	chr2	-	3577	2	incomplete-splice_match	IKZF2	ENST00000451136.6	9344	8	129547	4887	-6784	785	5prime_fragment	FALSE	canonical	1	8261	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	252	759	37	795	30.0	-11	True	AATAAA	-36
PB.11442.2	chr9	+	6289	26	full-splice_match	RIC1	ENST00000414202.6	6774	26	-15	500	-15	-495	multi-exon	FALSE	canonical	1	105231	junction_7	33245.95987258603	NA	0	NA	TRUE	NA	NA	NA	C	coding	1423	4272	207	4478	25.0	-3	True	AATAAA	-16
PB.6984.26	chr2	-	3835	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-829	-423219	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	1	NA	TRUE	NA	NA	NA	B	coding	300	903	149	1051	25.0	-1	True	AATAAA	-38
PB.609.10	chr1	+	3116	6	novel_not_in_catalog	CEPT1	novel	1957	9	NA	NA	41	2143	any annotated donor/acceptor	FALSE	canonical	1	26205	junction_4	127288.21168513603	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	115	774	75.0	-5460	False	NA	NA
PB.884.12	chr1	+	2964	15	novel_not_in_catalog	ATF6	novel	7496	16	NA	NA	50	5724	any annotated donor/acceptor	FALSE	canonical	1	2837	junction_14	124369.73836075829	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	18	1847	20.0	3	True	AATAAA	-16
PB.7632.1	chr22	-	1841	2	full-splice_match	THAP7	ENST00000471073.1	1809	2	-31	-1	-31	0	multi-exon	FALSE	canonical	1	569389	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	1234	1614	5.0	289	False	AATAAA	-18
PB.1117.5	chr1	-	4240	8	full-splice_match	ANGEL2	ENST00000360506.6	4323	8	82	1	82	-1	multi-exon	FALSE	canonical	1	26801	junction_7	65193.08371041724	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	255	1382	15.0	-1	True	AATAAA	-14
PB.153.6	chr1	+	1428	6	full-splice_match	CDC42	ENST00000315554.12	1452	6	22	2	4	-2	multi-exon	FALSE	canonical	1	1904	junction_3	258898.02070467823	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	83	658	35.0	2	True	ATTAAA	-18
PB.153.5	chr1	+	2097	6	novel_in_catalog	AL031281.2	novel	10598	6	NA	NA	27193	-8411	no_combination_of_known_junctions	FALSE	canonical	1	1904	junction_3	273543.95624659664	NA	1	NA	TRUE	NA	NA	NA	B	coding	191	576	90	665	15.0	-5	True	ATTAAA	-24
PB.8260.39	chr3	-	3192	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	-5	-865	no_combination_of_known_junctions	FALSE	canonical	1	15297	junction_14	224176.9295024989	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	369	2468	15.0	0	True	TATAAA	-21
PB.153.4	chr1	+	1692	7	full-splice_match	CDC42	ENST00000344548.7	2256	7	31	533	-8	-510	multi-exon	FALSE	canonical	1	1904	junction_4	257568.85790820845	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	221	796	20.0	-10	True	ATTAAA	-19
PB.5651.8	chr19	-	1913	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242530.09220133384	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	130	1464	15.0	284	False	AATAAA	-21
PB.5651.9	chr19	-	1795	6	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	1	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	273386.19655015506	NA	9	1	TRUE	NA	NA	NA	C	coding	444	1335	97	1431	15.0	0	True	AATAAA	-21
PB.5651.5	chr19	-	2016	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242530.09220133384	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	101	1435	15.0	-4	True	AATAAA	-21
PB.5651.6	chr19	-	2097	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	7	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	242530.09220133384	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	119	1453	15.0	7	True	AATAAA	-21
PB.5651.7	chr19	-	1889	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	0	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	242530.09220133384	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	98	1432	15.0	-1	True	AATAAA	-21
PB.5651.1	chr19	-	1489	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	0	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	242530.09220133384	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	98	1432	15.0	-1	True	AATAAA	-21
PB.5651.2	chr19	-	2336	4	full-splice_match	TUBB4A	ENST00000264071.6	2552	4	215	1	-31	-1	multi-exon	FALSE	canonical	1	517243	junction_2	39110.59580500177	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	158	1492	15.0	256	False	AATAAA	-21
PB.5651.3	chr19	-	2142	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	1	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	242530.09220133384	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	125	1459	15.0	1	True	AATAAA	-21
PB.153.1	chr1	+	1556	6	novel_in_catalog	AL031281.2	novel	10598	6	NA	NA	27198	-8947	no_combination_of_known_junctions	FALSE	canonical	1	1904	junction_3	273543.95624659664	NA	0	NA	TRUE	NA	NA	NA	B	coding	191	576	85	660	20.0	0	True	ATTAAA	-19
PB.6964.10	chr2	+	5378	15	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	-28	887	intron_retention	FALSE	canonical	0	0	junction_14	53721.99640766816	NA	7	1	TRUE	NA	NA	NA	C	coding	816	2451	820	3270	30.0	-3019	False	AATAAA	-19
PB.1568.10	chr10	-	1325	10	incomplete-splice_match	ARHGAP19	ENST00000358531.8	5463	12	19	7671	0	-4535	3prime_fragment	FALSE	canonical	1	92090	junction_5	25583.649779198655	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1314	11	1324	65.0	-1	True	NA	NA
PB.3647.3	chr14	-	2632	9	novel_in_catalog	CLMN	novel	12747	13	NA	NA	6	-4907	no_combination_of_known_junctions	FALSE	canonical	1	1882	junction_8	37906.77338468021	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2382	251	2632	80.0	-25	True	AAGAAA	-27
PB.3647.2	chr14	-	2671	10	incomplete-splice_match	CLMN	ENST00000298912.8	12747	13	-2	14711	-2	-4938	3prime_fragment	FALSE	canonical	1	47444	junction_9	26291.683706046013	NA	1	NA	TRUE	NA	NA	NA	C	coding	851	2553	117	2669	60.0	-33	True	AAAACA	-17
PB.3647.1	chr14	-	3148	13	full-splice_match	CLMN	ENST00000298912.8	12747	13	11	9588	11	-1	multi-exon	TRUE	canonical	1	47444	junction_12	28775.04613508706	NA	0	NA	TRUE	NA	NA	NA	C	coding	1002	3009	104	3112	15.0	-20	True	AATAAA	-16
PB.8317.9	chr3	-	1935	9	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	-2	-2326	intron_retention	FALSE	canonical	1	29504	junction_8	85434.01352323031	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	314	1780	35.0	-4	True	ATTAAA	-10
PB.6951.2	chr2	-	1183	5	full-splice_match	SUMO1	ENST00000392246.6	1536	5	42	311	0	159	multi-exon	FALSE	canonical	1	1445	junction_3	190887.8652049417	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	116	421	50.0	18	True	AATAAA	-11
PB.6951.3	chr2	-	1105	5	full-splice_match	SUMO1	ENST00000392246.6	1536	5	15	416	1	54	multi-exon	FALSE	canonical	1	1445	junction_3	190887.8652049417	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	143	448	30.0	-9	True	AATAAA	-24
PB.6951.1	chr2	-	1509	5	full-splice_match	SUMO1	ENST00000392246.6	1536	5	23	4	1	3	multi-exon	FALSE	canonical	1	1445	junction_3	190887.8652049417	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	135	440	25.0	-1	True	AATAAA	-14
PB.11096.9	chr8	-	3614	17	full-splice_match	FGFR1	ENST00000356207.9	3824	17	71	139	71	-21	multi-exon	FALSE	non_canonical	0	0	junction_9	264942.0699972611	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	654	2855	90.0	89	False	NA	NA
PB.8468.10	chr3	-	1690	2	full-splice_match	SERP1	ENST00000491660.1	830	2	-11	-849	-9	-256	multi-exon	FALSE	canonical	1	3613157	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-15	True	AATAAA	-18
PB.7813.4	chr22	+	5077	23	full-splice_match	ZC3H7B	ENST00000352645.4	5909	23	10	822	10	-822	multi-exon	FALSE	canonical	1	380022	junction_1	115544.50405606483	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	248	3181	25.0	-42	True	NA	NA
PB.8924.28	chr4	-	2684	5	incomplete-splice_match	LEF1	ENST00000504775.5	860	8	-828	11303	0	-344	3prime_fragment	FALSE	canonical	1	246515	junction_4	25741.9191337301	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	656	1297	35.0	1	True	AATAAA	-13
PB.4980.10	chr17	+	2605	4	full-splice_match	CNP	ENST00000393892.7	5217	4	54	2558	0	-3	multi-exon	FALSE	canonical	1	445247	junction_1	349930.42517715815	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	91	1356	10.0	0	True	AATAAA	-14
PB.7813.3	chr22	+	2501	14	incomplete-splice_match	ZC3H7B	ENST00000352645.4	5909	23	10	13350	10	9954	3prime_fragment	FALSE	canonical	1	380022	junction_1	74299.9502027436	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	248	2038	75.0	-42	True	NA	NA
PB.7813.1	chr22	+	5851	23	full-splice_match	ZC3H7B	ENST00000352645.4	5909	23	55	3	55	-3	multi-exon	FALSE	canonical	1	380022	junction_1	115544.50405606483	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	203	3136	15.0	3	True	AATAAA	-12
PB.8924.23	chr4	-	3274	12	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	0	13	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	91124.66817126037	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	961	2076	40.0	-1	True	AATAAA	-8
PB.8924.22	chr4	-	2490	11	novel_in_catalog	LEF1	novel	3068	12	NA	NA	105	14	combination_of_known_junctions	FALSE	canonical	1	47559	junction_10	94280.0852009055	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	337	1377	45.0	-3	True	AATAAA	-9
PB.8924.27	chr4	-	2527	8	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	119	-1840	any annotated donor/acceptor	FALSE	canonical	1	9263	junction_1	105743.83612489272	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	1071	2048	25.0	4455	False	AATAAA	-16
PB.8924.26	chr4	-	2214	9	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	-19	-1841	any annotated donor/acceptor	FALSE	canonical	1	9263	junction_1	96282.36016789368	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	675	1736	25.0	4851	False	AATAAA	-15
PB.9667.30	chr5	+	4103	14	novel_in_catalog	CANX	novel	585	5	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	433	junction_13	1666424.7124944401	NA	2	NA	TRUE	NA	NA	NA	C	coding	550	1653	125	1777	15.0	0	True	ATTAAA	-17
PB.10715.4	chr7	+	2546	10	full-splice_match	COPS6	ENST00000303904.7	1432	10	25	-1139	-2	1139	multi-exon	FALSE	canonical	1	1755852	junction_1	256297.63471247617	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	13	996	20.0	10	True	NA	NA
PB.8657.2	chr4	-	1638	7	full-splice_match	SLBP	ENST00000488267.5	987	7	-2	-649	-1	2	multi-exon	FALSE	canonical	1	31880	junction_5	469754.02179497684	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	132	839	10.0	-1	True	AATAAA	-18
PB.7328.8	chr20	-	3866	1	novel_in_catalog	SLC35C2	novel	2175	11	NA	NA	-23	-2135	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	129	390	3	392	90.0	-30	True	NA	NA
PB.10715.2	chr7	+	1424	10	full-splice_match	COPS6	ENST00000303904.7	1432	10	5	3	5	-3	multi-exon	FALSE	canonical	1	1755852	junction_1	256297.63471247617	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	33	1016	35.0	-10	True	TATAAA	-28
PB.10715.3	chr7	+	1779	9	novel_in_catalog	COPS6	novel	1432	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1755852	junction_1	265133.1197009521	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	1146	1661	0.0	-3	True	AATAAA	-23
PB.9667.32	chr5	+	2687	16	novel_in_catalog	CANX	novel	585	5	NA	NA	-6	363	combination_of_known_junctions	FALSE	canonical	1	10464	junction_1	1890693.3305995262	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	121	2061	40.0	-9291	False	ATTAAA	-13
PB.4761.2	chr17	-	2123	3	full-splice_match	TMEM107	ENST00000431792.2	455	3	-106	-1562	-23	796	multi-exon	FALSE	canonical	1	6784	junction_1	65013.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-43	False	NA	NA
PB.6964.12	chr2	+	6438	15	novel_in_catalog	NRP2	novel	1531	4	NA	NA	-19	-3	intron_retention	FALSE	canonical	1	3021	junction_12	70838.34953250815	NA	4	NA	TRUE	NA	NA	NA	C	coding	698	2097	811	2907	25.0	2	True	AATAAA	-19
PB.4761.1	chr17	-	2300	5	full-splice_match	TMEM107	ENST00000437139.6	747	5	-27	-1526	-2	796	multi-exon	TRUE	canonical	1	123128	junction_1	11029.120828515752	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	116	538	20.0	-22	True	NA	NA
PB.11549.5	chr9	+	2159	6	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	224	568	combination_of_known_junctions	FALSE	canonical	1	50164	junction_4	54037.224782921636	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	90	1658	25.0	-19	True	AATAAA	-22
PB.6698.5	chr2	+	3201	12	novel_in_catalog	SLC20A1	novel	3381	11	NA	NA	82	-6	combination_of_known_junctions	FALSE	canonical	1	7863	junction_7	362324.00900858	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	1634	2407	30.0	0	True	AATAAA	-17
PB.1158.6	chr1	+	1865	1	novel_in_catalog	SRP9	novel	377	3	NA	NA	-2	-7278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	1	True	AATAAA	-8
PB.1158.7	chr1	+	2572	5	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_4	114571.3769040396	NA	9	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	3	True	AATAAA	-10
PB.1158.4	chr1	+	2280	4	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	-3	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	127089.65188488882	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-10
PB.1158.5	chr1	+	2743	3	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	-2	-8	intron_retention	FALSE	canonical	1	3919	junction_1	21199.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	AATAAA	-10
PB.995.19	chr1	-	2968	15	full-splice_match	IVNS1ABP	ENST00000367498.7	4199	15	86	1145	30	238	multi-exon	FALSE	canonical	1	480060	junction_14	328786.5563384907	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	538	2466	30.0	-1	True	ATTAAA	-22
PB.995.18	chr1	-	3323	15	full-splice_match	IVNS1ABP	ENST00000367498.7	4199	15	89	787	33	-160	multi-exon	FALSE	canonical	1	480060	junction_14	328786.5563384907	NA	2	NA	TRUE	NA	NA	NA	C	coding	642	1929	535	2463	25.0	2	True	AGTAAA	-21
PB.1158.1	chr1	+	1590	4	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	3	-8	any annotated donor/acceptor	FALSE	canonical	1	3919	junction_1	123100.3637714636	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7885	False	AATAAA	-10
PB.995.15	chr1	-	3760	16	full-splice_match	IVNS1ABP	ENST00000459929.5	3657	16	0	-103	0	103	multi-exon	FALSE	canonical	1	101344	junction_8	412805.49858111143	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	1363	2637	30.0	-1	True	ATTAAA	-14
PB.995.14	chr1	-	4603	15	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	8	113	intron_retention	FALSE	canonical	1	218703	junction_8	374535.61357249116	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	2562	3470	40.0	587	False	ATTAAA	-24
PB.995.17	chr1	-	3516	15	full-splice_match	IVNS1ABP	ENST00000367498.7	4199	15	56	627	0	0	multi-exon	FALSE	canonical	1	480060	junction_14	328786.5563384907	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	568	2496	20.0	-1	True	GATAAA	-15
PB.1158.8	chr1	+	2980	5	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	3	-8	intron_retention	TRUE	non_canonical	0	0	junction_2	1696.9767787156075	NA	8	2	TRUE	NA	NA	NA	C	coding	115	348	597	944	35.0	6	True	AATAAA	-10
PB.995.12	chr1	-	3621	15	novel_not_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	30	131	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	405796.41634131526	NA	15	1	TRUE	NA	NA	NA	C	coding	302	909	1562	2470	25.0	-1	True	ATTAAA	-42
PB.10970.15	chr8	+	5063	7	full-splice_match	AGPAT5	ENST00000523234.5	2525	7	28	-2566	1	1785	multi-exon	FALSE	canonical	1	8886	junction_1	169304.0411266239	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	359	1000	25.0	1	True	AATAAA	-21
PB.8005.17	chr3	-	4085	8	incomplete-splice_match	CLASP2	ENST00000359576.9	7141	40	-26	145522	-26	2611	3prime_fragment	FALSE	canonical	1	132747	junction_7	22971.603143437595	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	238	1194	90.0	0	True	NA	NA
PB.10970.17	chr8	+	3146	7	novel_not_in_catalog	AGPAT5	novel	3685	8	NA	NA	-13314	-34	any annotated donor/acceptor	FALSE	canonical	1	1512	junction_1	171985.85159969472	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	261	902	75.0	0	True	NA	NA
PB.10970.16	chr8	+	3010	5	novel_in_catalog	AGPAT5	novel	3685	8	NA	NA	12	-34	no_combination_of_known_junctions	FALSE	canonical	1	8886	junction_1	240586.38329610426	NA	0	NA	TRUE	NA	NA	NA	C	coding	42	129	375	503	75.0	-9847	False	NA	NA
PB.10970.11	chr8	+	3303	7	full-splice_match	AGPAT5	ENST00000523234.5	2525	7	0	-778	0	-3	multi-exon	FALSE	canonical	1	8886	junction_1	169304.0411266239	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	387	1028	25.0	24	True	AATAAA	-17
PB.10970.10	chr8	+	1787	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	306	1592	-3	379	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	7	1101	35.0	21	True	TATAAA	-18
PB.10970.13	chr8	+	3867	7	full-splice_match	AGPAT5	ENST00000523234.5	2525	7	-1	-1341	-1	560	multi-exon	FALSE	canonical	1	8886	junction_1	169304.0411266239	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	388	1029	80.0	23	True	NA	NA
PB.10970.12	chr8	+	3284	7	novel_in_catalog	AGPAT5	novel	3685	8	NA	NA	-3	-4	no_combination_of_known_junctions	FALSE	canonical	1	3940	junction_4	181324.3567748292	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	567	1010	20.0	21	True	AATAAA	-16
PB.637.6	chr1	+	8676	8	full-splice_match	VANGL1	ENST00000355485.6	8691	8	9	6	9	-6	multi-exon	FALSE	canonical	1	46602	junction_1	38560.48695549498	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	263	1837	15.0	-8	True	AATAAA	-11
PB.1190.10	chr1	+	4302	15	novel_in_catalog	GALNT2	novel	692	7	NA	NA	-21	1	intron_retention	FALSE	canonical	1	787	junction_14	228232.69066597943	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	44	1639	15.0	0	True	AATAAA	-18
PB.1190.11	chr1	+	2156	16	novel_not_in_catalog	GALNT2	novel	692	7	NA	NA	-21	-2046	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	242753.1240483357	NA	2	1	TRUE	NA	NA	NA	C	coding	517	1554	44	1597	35.0	0	True	TATAAA	-12
PB.6964.14	chr2	+	4110	16	full-splice_match	NRP2	ENST00000272849.7	5909	16	-792	2591	-1	-33	multi-exon	FALSE	canonical	1	7766	junction_15	56887.60422501744	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	793	3513	35.0	-2	True	AATATA	-24
PB.10709.1	chr7	-	1807	11	novel_not_in_catalog	CYP3A7	novel	1704	13	NA	NA	345	0	any annotated donor/acceptor	FALSE	canonical	1	401	junction_10	22979.08135261286	NA	0	NA	TRUE	NA	NA	NA	A	coding	423	1272	80	1351	35.0	-198	False	AATAAA	-12
PB.4570.2	chr16	-	1175	5	full-splice_match	GCSH	ENST00000315467.8	1597	5	38	384	38	6	multi-exon	FALSE	canonical	1	218	junction_2	38438.6404578778	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	110	631	20.0	-10	True	AATAAA	-18
PB.4570.1	chr16	-	1324	5	full-splice_match	GCSH	ENST00000315467.8	1597	5	76	197	-13	193	multi-exon	FALSE	canonical	1	218	junction_2	38438.6404578778	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	72	593	70.0	28	True	NA	NA
PB.1122.1	chr1	+	2411	18	full-splice_match	KCTD3	ENST00000259154.8	3931	18	112	1408	112	196	multi-exon	FALSE	canonical	1	143433	junction_1	107125.14507107223	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2229	183	2411	65.0	-6277	False	CATAAA	-40
PB.248.1	chr1	+	1787	9	full-splice_match	TMEM39B	ENST00000336294.9	1813	9	26	0	-7	0	multi-exon	FALSE	canonical	1	24682	junction_3	79136.46499876022	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	121	1599	20.0	-38	True	AAAAAG	-19
PB.1213.2	chr1	-	1893	11	novel_not_in_catalog	RBM34	novel	2054	11	NA	NA	-10	1	intron_retention	FALSE	canonical	1	3701	junction_8	197148.75622392347	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	1502	1828	20.0	-4	True	AATAAA	-20
PB.1213.3	chr1	-	1381	11	full-splice_match	RBM34	ENST00000408888.7	2054	11	207	466	8	0	multi-exon	FALSE	canonical	1	486276	junction_7	74828.12267162661	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	25	1317	20.0	-10	True	AATAAA	-19
PB.1213.1	chr1	-	1840	11	full-splice_match	RBM34	ENST00000408888.7	2054	11	213	1	-10	-1	multi-exon	FALSE	canonical	1	486276	junction_7	74828.12267162661	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	19	1311	15.0	-4	True	NA	NA
PB.1213.6	chr1	-	2348	10	incomplete-splice_match	RBM34	ENST00000408888.7	2054	11	201	3159	2	1307	3prime_fragment	FALSE	canonical	1	486276	junction_6	78746.62080807885	NA	10	NA	TRUE	NA	NA	NA	C	coding	363	1092	31	1122	65.0	-16	True	NA	NA
PB.1213.4	chr1	-	1258	11	novel_not_in_catalog	RBM34	novel	2054	11	NA	NA	10	-109	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	198368.43838625136	NA	1	1	TRUE	NA	NA	NA	C	coding	412	1236	23	1258	65.0	-8	True	AAAAAG	-12
PB.1213.5	chr1	-	2627	10	incomplete-splice_match	RBM34	ENST00000408888.7	2054	11	207	2874	8	1592	3prime_fragment	FALSE	canonical	1	486276	junction_6	78746.62080807885	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	25	1116	75.0	-10	True	NA	NA
PB.6964.15	chr2	+	6171	17	novel_in_catalog	NRP2	novel	1531	4	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	4841	junction_1	67559.69068231324	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	281	2986	25.0	-2	True	AATAAA	-19
PB.9857.1	chr6	-	1237	2	full-splice_match	IER3	ENST00000259874.5	1244	2	6	1	0	-1	multi-exon	FALSE	canonical	1	947950	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	146	441	61	501	15.0	-2	True	AATAAA	-18
PB.1645.17	chr10	+	2303	7	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-62	-14	any annotated donor/acceptor	FALSE	canonical	1	25	junction_1	434708.71474611846	NA	7	NA	TRUE	NA	NA	NA	C	coding	67	204	144	347	75.0	-8686	False	TTTAAA	-25
PB.1645.16	chr10	+	2317	5	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-66	128	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	485332.5026262923	NA	6	1	TRUE	NA	NA	NA	C	coding	182	549	122	670	20.0	-8690	False	AATAAA	-22
PB.1645.15	chr10	+	2294	7	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-67	-14	any annotated donor/acceptor	FALSE	canonical	1	681	junction_1	433832.5118075523	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-8691	False	TTTAAA	-25
PB.1645.14	chr10	+	2675	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-80	127	any annotated donor/acceptor	FALSE	canonical	1	401	junction_1	392091.3546155283	NA	6	NA	TRUE	NA	NA	NA	C	coding	192	579	451	1029	20.0	-8704	False	AATAAA	-21
PB.1645.13	chr10	+	2324	6	novel_in_catalog	MXI1	novel	3470	6	NA	NA	40	-14	combination_of_known_junctions	FALSE	canonical	1	1367	junction_1	391799.26939523505	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	133	819	75.0	-8584	False	TTTAAA	-25
PB.1645.12	chr10	+	2709	5	incomplete-splice_match	MXI1	ENST00000239007.11	2424	6	1605	15	-45	-15	5prime_fragment	FALSE	canonical	1	406518	junction_1	286882.0551990835	NA	4	NA	TRUE	NA	NA	NA	C	coding	192	579	627	1205	70.0	-8567	False	TTTAAA	-24
PB.1645.11	chr10	+	2419	6	full-splice_match	MXI1	ENST00000369612.1	879	6	-96	-1444	42	-14	multi-exon	FALSE	canonical	1	283	junction_1	392127.04494711914	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	336	914	75.0	-8582	False	TTTAAA	-25
PB.1645.10	chr10	+	2920	5	incomplete-splice_match	MXI1	ENST00000239007.11	2424	6	1537	-128	-11	128	5prime_fragment	FALSE	canonical	1	406518	junction_1	286882.0551990835	NA	3	NA	TRUE	NA	NA	NA	C	coding	192	579	695	1273	20.0	-8635	False	AATAAA	-22
PB.8918.5	chr4	+	5311	4	novel_not_in_catalog	AIMP1	novel	568	5	NA	NA	41	-3496	any annotated donor/acceptor	FALSE	canonical	1	21663	junction_1	413727.8112124766	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	381	4930	5310	45.0	-2	True	NA	NA
PB.8918.4	chr4	+	2774	7	full-splice_match	AIMP1	ENST00000394701.4	2586	7	41	-229	41	229	multi-exon	FALSE	canonical	1	529597	junction_1	140124.30655631766	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	1	1011	40.0	-2	True	AATAAA	-27
PB.8918.7	chr4	+	2539	7	full-splice_match	AIMP1	ENST00000394701.4	2586	7	43	4	43	2	multi-exon	FALSE	canonical	1	529597	junction_1	140124.30655631766	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	44	1009	20.0	0	True	AATAAA	-14
PB.8918.6	chr4	+	2831	6	novel_not_in_catalog	AIMP1	novel	568	5	NA	NA	43	-724	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	331728.32339937455	NA	1	1	TRUE	NA	NA	NA	C	coding	222	669	2088	2756	35.0	0	True	AATAAA	-27
PB.2252.2	chr11	-	3558	2	novel_not_in_catalog	LINC02552	novel	652	5	NA	NA	-30	8264	any annotated donor/acceptor	FALSE	canonical	1	640	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.1645.19	chr10	+	2427	6	novel_in_catalog	MXI1	novel	3470	6	NA	NA	-27	124	combination_of_known_junctions	FALSE	canonical	1	1367	junction_1	391799.26939523505	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	98	784	10.0	-8549	False	AATAAA	-18
PB.1645.18	chr10	+	2802	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-58	-14	intron_retention	TRUE	non_canonical	0	0	junction_1	440137.9117399454	NA	2	1	TRUE	NA	NA	NA	C	coding	161	486	812	1297	75.0	-8682	False	TTTAAA	-25
PB.11901.1	chr9	-	2039	8	full-splice_match	ENTR1	ENST00000371725.7	2129	8	117	-27	44	1	multi-exon	FALSE	canonical	1	45284	junction_7	136054.02526667598	NA	3	NA	TRUE	NA	NA	NA	A	coding	362	1089	87	1175	10.0	642	False	AATAAA	-16
PB.9012.1	chr4	+	1828	1	antisense	novelGene_ZNF827_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.383.6	chr1	-	4943	10	novel_in_catalog	PIK3R3	novel	5609	10	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	1086	junction_9	62399.276692745225	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	160	1413	15.0	425	False	AATAAA	-16
PB.383.5	chr1	-	5169	11	full-splice_match	PIK3R3	ENST00000420542.5	5174	11	3	2	3	-2	multi-exon	FALSE	canonical	1	18975	junction_10	54545.36953225269	NA	5	NA	TRUE	NA	NA	NA	C	coding	461	1386	255	1640	15.0	308	False	AATAAA	-15
PB.4961.1	chr17	+	3700	14	full-splice_match	CASC3	ENST00000264645.11	4116	14	397	19	-122	0	multi-exon	FALSE	canonical	1	347917	junction_13	140756.58466773567	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	748	1941	20.0	-515	False	AATAAA	-12
PB.10459.23	chr7	+	4298	15	incomplete-splice_match	TAX1BP1	ENST00000265393.10	2478	17	68	9618	-6	-9601	3prime_fragment	FALSE	canonical	1	1075000	junction_1	181591.8218697064	NA	2	NA	TRUE	NA	NA	NA	C	coding	655	1968	115	2082	85.0	-19	True	NA	NA
PB.4961.3	chr17	+	3866	14	novel_not_in_catalog	CASC3	novel	1986	8	NA	NA	-18	-7	intron_retention	FALSE	canonical	1	2668	junction_10	242382.2077071787	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	31	2100	15.0	-18	True	AATAAA	-24
PB.4961.2	chr17	+	3797	14	novel_not_in_catalog	CASC3	novel	1986	8	NA	NA	-33	7	intron_retention	FALSE	canonical	1	8898	junction_10	211061.97443155586	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	46	2031	5.0	-33	True	AATAAA	-19
PB.4961.5	chr17	+	4144	13	novel_in_catalog	CASC3	novel	1986	8	NA	NA	0	7	intron_retention	FALSE	canonical	1	347917	junction_12	138948.64880063006	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	13	2151	5.0	0	True	AATAAA	-19
PB.4961.4	chr17	+	5017	11	novel_in_catalog	CASC3	novel	1986	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	347917	junction_10	148468.10268151877	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	21	1622	20.0	-8	True	AATAAA	-11
PB.4961.7	chr17	+	4004	13	incomplete-splice_match	CASC3	ENST00000264645.11	4116	14	527	12	8	7	5prime_fragment	FALSE	canonical	1	347917	junction_12	141774.16145699233	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	337	2238	5.0	-385	False	AATAAA	-19
PB.4961.6	chr17	+	2634	9	novel_not_in_catalog	CASC3	novel	1986	8	NA	NA	3	8	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	244154.07849245524	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	10	867	5.0	3	True	AATAAA	-20
PB.10459.28	chr7	+	2351	13	incomplete-splice_match	TAX1BP1	ENST00000409980.5	2629	18	22	28317	-5	28025	3prime_fragment	FALSE	canonical	1	1075000	junction_1	192907.96198495151	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	114	1916	80.0	-18	True	NA	NA
PB.10459.29	chr7	+	3415	17	full-splice_match	TAX1BP1	ENST00000396319.6	2892	17	-20	-503	0	1	multi-exon	FALSE	canonical	1	242700	junction_14	342112.0649207791	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	109	2478	25.0	-13	True	ATTAAA	-30
PB.10740.2	chr7	+	2678	4	novel_not_in_catalog	TRIM56	novel	10952	3	NA	NA	29	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	82697.14118530472	NA	4	NA	TRUE	NA	NA	NA	C	coding	755	2268	269	2536	90.0	-13	True	NA	NA
PB.4506.1	chr16	+	4497	10	novel_in_catalog	SLC7A6	novel	6124	10	NA	NA	-10	-1623	intron_retention	FALSE	canonical	1	11109	junction_1	76021.96253422793	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	108	1655	75.0	-44	True	NA	NA
PB.4506.2	chr16	+	3694	13	novel_in_catalog	SLC7A6	novel	6124	10	NA	NA	-5	-1623	intron_retention	TRUE	canonical	1	30457	junction_2	85407.9690684007	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	319	1866	75.0	-39	True	NA	NA
PB.4506.3	chr16	+	6140	10	novel_in_catalog	SLC7A6	novel	6124	10	NA	NA	-4	0	intron_retention	FALSE	canonical	1	11109	junction_1	76021.96253422793	NA	5	NA	TRUE	NA	NA	NA	C	coding	515	1548	102	1649	10.0	-38	True	AATAAA	-16
PB.4506.4	chr16	+	6266	11	full-splice_match	SLC7A6	ENST00000219343.10	6251	11	-11	-4	3	0	multi-exon	FALSE	canonical	1	73693	junction_1	60485.817227594765	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	224	1771	20.0	-31	True	AATAAA	-20
PB.4506.5	chr16	+	3551	12	full-splice_match	SLC7A6	ENST00000566454.5	6308	12	-41	2798	3	1588	multi-exon	FALSE	canonical	1	30457	junction_2	79054.82419297268	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	311	1858	25.0	-31	True	AATAAA	-26
PB.4506.6	chr16	+	3466	11	full-splice_match	SLC7A6	ENST00000219343.10	6251	11	-11	2796	3	1590	multi-exon	TRUE	canonical	1	73693	junction_1	60485.817227594765	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	224	1771	25.0	-31	True	AATAAA	-28
PB.4506.7	chr16	+	4720	12	full-splice_match	SLC7A6	ENST00000566454.5	6308	12	-37	1625	0	-1599	multi-exon	FALSE	canonical	1	30457	junction_2	79054.82419297268	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	307	1854	20.0	-27	True	NA	NA
PB.4506.8	chr16	+	1851	11	full-splice_match	SLC7A6	ENST00000219343.10	6251	11	18	4382	0	4	multi-exon	FALSE	canonical	1	73693	junction_1	60485.817227594765	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	195	1742	20.0	-2	True	ATTAAA	-18
PB.4506.9	chr16	+	5215	12	novel_in_catalog	SLC7A6	novel	6124	10	NA	NA	5	-1	intron_retention	FALSE	canonical	1	35684	junction_11	74249.2300006266	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	188	1735	20.0	5	True	AATAAA	-19
PB.11890.7	chr9	+	2395	6	incomplete-splice_match	WDR5	ENST00000358625.3	3151	14	15894	2	15894	-2	5prime_fragment	FALSE	canonical	1	303444	junction_3	95686.64311595427	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	3	422	30.0	-2512	False	AATAAA	-17
PB.11890.1	chr9	+	3504	14	novel_in_catalog	WDR5	novel	705	3	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	14652	junction_1	163441.1644863039	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	527	1531	30.0	-28	True	AATAAA	-17
PB.11890.3	chr9	+	1883	14	full-splice_match	WDR5	ENST00000358625.3	3151	14	-17	1285	-17	-1285	multi-exon	FALSE	canonical	1	148371	junction_1	140704.4086906386	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	189	1193	20.0	-17	True	AATAAA	-16
PB.11890.2	chr9	+	2198	14	novel_in_catalog	WDR5	novel	705	3	NA	NA	20	-1286	intron_retention	FALSE	canonical	1	14652	junction_1	163441.1644863039	NA	5	NA	TRUE	NA	NA	NA	C	coding	334	1005	505	1509	20.0	-6	True	AATAAA	-15
PB.10740.3	chr7	+	3391	2	novel_in_catalog	TRIM56	novel	10952	3	NA	NA	36	-19	no_combination_of_known_junctions	FALSE	canonical	1	9767	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	99	2366	95.0	-6	True	NA	NA
PB.1922.1	chr11	-	2799	5	novel_not_in_catalog	LRP4	novel	8076	38	NA	NA	-2537	0	any annotated donor/acceptor	FALSE	canonical	1	206	junction_4	42501.817810389	NA	0	NA	TRUE	NA	NA	NA	A	coding	161	486	199	684	10.0	-1	True	TATAAA	-18
PB.9312.4	chr5	-	1789	7	incomplete-splice_match	ARSB	ENST00000396151.7	2316	8	675	192	-163	-192	5prime_fragment	FALSE	canonical	1	14194	junction_1	57846.3409473754	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	165	1406	30.0	-19	True	AATAAA	-29
PB.5196.13	chr17	-	3001	14	novel_in_catalog	HELZ	novel	13810	33	NA	NA	-1	1054	combination_of_known_junctions	FALSE	canonical	1	940	junction_1	68537.27613332141	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	169	1698	20.0	-7	True	NA	NA
PB.9312.3	chr5	-	2396	8	full-splice_match	ARSB	ENST00000264914.9	5329	8	365	2568	-173	575	multi-exon	FALSE	canonical	1	106822	junction_7	25312.03767106126	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	175	1776	25.0	9	True	AATAAA	-19
PB.9312.1	chr5	-	4949	8	full-splice_match	ARSB	ENST00000264914.9	5329	8	373	7	-165	-7	multi-exon	FALSE	canonical	1	106822	junction_7	25312.03767106126	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	167	1768	50.0	543	False	AATAAA	-26
PB.8922.4	chr4	+	1845	8	full-splice_match	HADH	ENST00000309522.7	1912	8	61	6	8	-2	multi-exon	FALSE	canonical	1	626170	junction_1	124157.33166298908	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	89	1033	15.0	-8	True	AGTAAA	-19
PB.8922.2	chr4	+	1169	8	full-splice_match	HADH	ENST00000309522.7	1912	8	57	686	4	1	multi-exon	FALSE	canonical	1	626170	junction_1	124157.33166298908	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	93	1037	35.0	-12	True	AATAAA	-16
PB.8922.3	chr4	+	1742	8	full-splice_match	HADH	ENST00000309522.7	1912	8	58	112	5	-40	multi-exon	FALSE	canonical	1	626170	junction_1	124157.33166298908	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	92	1036	45.0	-11	True	TATAAA	-12
PB.8922.1	chr4	+	1886	9	full-splice_match	HADH	ENST00000639146.1	1964	9	-8	86	0	-40	multi-exon	FALSE	canonical	1	12207	junction_6	373133.3589877753	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	105	842	45.0	-24	True	TATAAA	-12
PB.9870.11	chr6	-	3963	10	novel_not_in_catalog	DDX39B	novel	974	4	NA	NA	-3	-13	intron_retention	FALSE	canonical	1	57500	junction_3	1246613.7131573677	NA	3	NA	TRUE	NA	NA	NA	C	coding	290	873	60	932	55.0	-4	True	NA	NA
PB.9870.10	chr6	-	1682	11	full-splice_match	DDX39B	ENST00000396172.5	2133	11	442	9	-3	-9	multi-exon	FALSE	canonical	1	855812	junction_10	977015.9468963442	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	190	1476	20.0	-4	True	ACTAAA	-23
PB.9870.13	chr6	-	3865	10	novel_not_in_catalog	DDX39B	novel	974	4	NA	NA	-13	-19	intron_retention	FALSE	canonical	1	34142	junction_9	1161906.0619423883	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	3145	3693	70.0	5500	False	NA	NA
PB.9870.12	chr6	-	2535	11	novel_in_catalog	DDX39B	novel	974	4	NA	NA	-3	-13	combination_of_known_junctions	FALSE	canonical	1	25454	junction_5	1268404.2939342172	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	190	1062	55.0	-4	True	NA	NA
PB.9870.14	chr6	-	5476	9	novel_in_catalog	DDX39B	novel	974	4	NA	NA	-2	-19	intron_retention	FALSE	canonical	1	855812	junction_8	972191.1059716394	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	189	1061	70.0	-3	True	NA	NA
PB.9870.17	chr6	-	3442	11	novel_not_in_catalog	DDX39B	novel	974	4	NA	NA	-4	-20	intron_retention	FALSE	canonical	1	17516	junction_5	1412101.495753648	NA	1	1	TRUE	NA	NA	NA	C	coding	274	825	61	885	70.0	-5	True	NA	NA
PB.7936.3	chr3	-	3719	8	novel_in_catalog	SEC13	novel	393	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	221756	junction_1	595303.4940030546	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	2854	3546	15.0	0	True	AATAAA	-15
PB.4975.2	chr17	-	3502	14	novel_not_in_catalog	JUP	novel	3298	15	NA	NA	-1	-30	intron_retention	FALSE	canonical	1	42159	junction_13	515674.41688507615	NA	2	1	TRUE	NA	NA	NA	C	coding	745	2238	155	2392	75.0	-1	True	NA	NA
PB.4975.3	chr17	-	3298	16	novel_not_in_catalog	JUP	novel	3298	15	NA	NA	1	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	611239.6482526091	NA	18	2	TRUE	NA	NA	NA	C	coding	755	2268	218	2485	75.0	1	True	NA	NA
PB.4975.1	chr17	-	3480	14	full-splice_match	JUP	ENST00000393931.7	3497	14	-13	30	-1	-30	multi-exon	FALSE	canonical	1	367575	junction_13	451452.32312912773	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	133	2370	75.0	-1	True	NA	NA
PB.8393.6	chr3	+	3460	26	novel_in_catalog	IFT122	novel	4414	31	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	1	22348	junction_13	52809.64469452148	NA	1	NA	TRUE	NA	NA	NA	C	coding	1112	3339	40	3378	20.0	45	True	AATAAA	-14
PB.4975.4	chr17	-	3223	15	full-splice_match	JUP	ENST00000310706.9	3200	15	-53	30	14	-30	multi-exon	FALSE	canonical	1	367575	junction_14	453973.5508491342	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2238	173	2410	75.0	-41	False	NA	NA
PB.6414.29	chr2	-	2396	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	59	620	no_combination_of_known_junctions	FALSE	canonical	1	8644	junction_3	137108.87592754725	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	250	1776	50.0	-7	True	ATTAAA	-20
PB.6414.28	chr2	-	2514	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	75	688	no_combination_of_known_junctions	FALSE	canonical	1	273	junction_7	136924.21757736406	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	234	1826	85.0	9	True	NA	NA
PB.3992.8	chr15	-	5052	21	full-splice_match	SIN3A	ENST00000360439.8	5050	21	-8	6	-8	-6	multi-exon	FALSE	canonical	1	5084	junction_20	106262.96998606804	NA	1	NA	TRUE	NA	NA	NA	C	coding	1273	3822	191	4012	45.0	23	False	AATAAA	-17
PB.3992.9	chr15	-	5087	21	novel_not_in_catalog	SIN3A	novel	6737	21	NA	NA	-18	6	any annotated donor/acceptor	FALSE	canonical	1	1438	junction_9	116021.7485061637	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	2262	4232	20.0	7	True	ATTAAA	-35
PB.3992.6	chr15	-	5007	20	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	-4	-3	no_combination_of_known_junctions	FALSE	canonical	1	5622	junction_18	116480.03799695832	NA	1	NA	TRUE	NA	NA	NA	C	coding	1214	3645	320	3964	45.0	-19	True	AATAAA	-20
PB.3992.7	chr15	-	4924	21	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	11928	junction_20	105242.55364699205	NA	3	NA	TRUE	NA	NA	NA	C	coding	1273	3822	62	3883	45.0	-1	True	AATAAA	-18
PB.2218.10	chr11	-	2110	12	full-splice_match	CHORDC1	ENST00000525317.5	1136	12	-18	-956	1	-2	multi-exon	FALSE	canonical	1	35501	junction_9	58305.91102308071	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	95	649	20.0	0	True	AATAAA	-14
PB.3992.5	chr15	-	5125	21	novel_not_in_catalog	SIN3A	novel	6737	21	NA	NA	995	-3	any annotated donor/acceptor	FALSE	canonical	1	683	junction_20	106924.99182196602	NA	1	NA	TRUE	NA	NA	NA	C	coding	1273	3822	261	4082	45.0	1783	False	AATAAA	-20
PB.3992.2	chr15	-	6477	21	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	11928	junction_20	105242.55364699205	NA	2	NA	TRUE	NA	NA	NA	C	coding	1273	3822	58	3879	15.0	3	True	ATTAAA	-12
PB.3992.3	chr15	-	5171	21	full-splice_match	SIN3A	ENST00000394947.7	6737	21	13	1553	13	1	multi-exon	FALSE	canonical	1	115879	junction_20	91350.95951629353	NA	1	NA	TRUE	NA	NA	NA	C	coding	1273	3822	303	4124	40.0	-2	True	AATAAA	-24
PB.6414.27	chr2	-	2539	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	59	688	no_combination_of_known_junctions	FALSE	canonical	1	5324	junction_1	138844.03832822238	NA	3	NA	TRUE	NA	NA	NA	C	coding	533	1602	250	1851	85.0	-7	True	NA	NA
PB.3992.1	chr15	-	6725	21	full-splice_match	SIN3A	ENST00000394947.7	6737	21	10	2	10	-2	multi-exon	FALSE	canonical	1	115879	junction_20	91350.95951629353	NA	1	NA	TRUE	NA	NA	NA	C	coding	1273	3822	306	4127	15.0	-5	True	ATTAAA	-12
PB.11138.2	chr8	+	3647	13	full-splice_match	LYN	ENST00000519728.5	2297	13	21	-1371	-1	1371	multi-exon	FALSE	canonical	1	341846	junction_2	156622.7227620875	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	276	1814	60.0	-1	True	TATAAA	-14
PB.11138.3	chr8	+	3356	13	full-splice_match	LYN	ENST00000520220.6	5808	13	-10	2462	-10	1134	multi-exon	FALSE	canonical	1	214914	junction_2	177777.62796638437	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	285	1760	20.0	-10	True	GATAAA	-25
PB.11138.1	chr8	+	2956	12	novel_in_catalog	LYN	novel	2297	13	NA	NA	10	806	no_combination_of_known_junctions	FALSE	canonical	1	9501	junction_1	217155.00495435807	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	417	1688	25.0	-12	True	AATACA	-13
PB.3780.1	chr15	+	1886	3	full-splice_match	RPUSD2	ENST00000315616.11	2358	3	-7	479	-7	106	multi-exon	FALSE	canonical	1	101227	junction_2	20344.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	148	1683	5.0	-47	True	AATATA	-20
PB.11138.7	chr8	+	2285	13	full-splice_match	LYN	ENST00000519728.5	2297	13	12	0	-10	0	multi-exon	FALSE	canonical	1	341846	junction_2	156622.7227620875	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	285	1823	85.0	-10	True	NA	NA
PB.3780.3	chr15	+	2458	3	full-splice_match	RPUSD2	ENST00000315616.11	2358	3	18	-118	-14	118	multi-exon	FALSE	canonical	1	101227	junction_2	20344.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	123	1658	20.0	-22	True	NA	NA
PB.3780.2	chr15	+	2352	3	full-splice_match	RPUSD2	ENST00000315616.11	2358	3	1	5	1	-5	multi-exon	FALSE	canonical	1	101227	junction_2	20344.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	140	1675	35.0	-39	True	NA	NA
PB.11138.8	chr8	+	3693	13	full-splice_match	LYN	ENST00000520220.6	5808	13	-8	2123	-8	1473	multi-exon	FALSE	canonical	1	214914	junction_2	177777.62796638437	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	283	1758	10.0	-8	True	ATTAAA	-29
PB.11138.9	chr8	+	3590	13	full-splice_match	LYN	ENST00000520220.6	5808	13	-8	2226	-8	1370	multi-exon	FALSE	canonical	1	214914	junction_2	177777.62796638437	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	283	1758	55.0	-8	True	TATAAA	-13
PB.9918.1	chr6	+	1737	7	full-splice_match	RING1	ENST00000374656.4	1752	7	6	9	6	-9	multi-exon	FALSE	canonical	1	338617	junction_1	192960.0900803209	NA	0	NA	TRUE	NA	NA	NA	A	coding	406	1221	203	1423	20.0	1	True	NA	NA
PB.8979.2	chr4	+	2060	9	novel_in_catalog	LARP1B	novel	4891	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	18351	junction_4	76947.35964270882	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	194	1060	20.0	-26	True	NA	NA
PB.8979.3	chr4	+	4816	19	novel_in_catalog	LARP1B	novel	4891	20	NA	NA	1	-20	combination_of_known_junctions	FALSE	canonical	1	23687	junction_12	71040.70768072188	NA	1	NA	TRUE	NA	NA	NA	C	coding	902	2709	193	2901	80.0	-25	True	AATAAA	-12
PB.8979.1	chr4	+	4710	19	novel_in_catalog	LARP1B	novel	4891	20	NA	NA	-1	-146	combination_of_known_junctions	FALSE	canonical	1	23687	junction_12	71040.70768072188	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	213	2921	40.0	1	True	TATAAA	-6
PB.8979.6	chr4	+	2740	9	full-splice_match	LARP1B	ENST00000432347.6	2707	9	-46	13	-10	-13	multi-exon	FALSE	canonical	1	89509	junction_1	62183.98664233723	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	178	1254	55.0	-10	True	NA	NA
PB.8979.7	chr4	+	2749	10	full-splice_match	LARP1B	ENST00000648358.1	2563	10	-152	-34	28	-13	multi-exon	FALSE	canonical	1	39177	junction_1	68371.43834314962	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	171	1763	55.0	14	True	NA	NA
PB.8979.4	chr4	+	3098	12	full-splice_match	LARP1B	ENST00000512292.5	3105	12	4	3	4	-3	multi-exon	FALSE	canonical	1	18074	junction_11	78342.885952324	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	190	1746	20.0	-22	True	ATTAAA	-19
PB.8979.5	chr4	+	2181	10	full-splice_match	LARP1B	ENST00000394288.7	2151	10	-43	13	6	-13	multi-exon	FALSE	canonical	1	89509	junction_1	59245.36568488545	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	188	1195	55.0	-20	True	NA	NA
PB.80.1	chr1	-	3074	5	full-splice_match	CTNNBIP1	ENST00000400904.7	1206	5	-37	-1831	-37	-2	multi-exon	FALSE	canonical	1	87378	junction_4	186259.08815209527	NA	0	NA	TRUE	NA	NA	NA	C	coding	81	246	389	634	10.0	-1	True	AATAAA	-14
PB.80.2	chr1	-	1125	5	full-splice_match	CTNNBIP1	ENST00000400904.7	1206	5	82	-1	9	1	multi-exon	FALSE	canonical	1	87378	junction_4	186259.08815209527	NA	1	NA	TRUE	NA	NA	NA	C	coding	81	246	270	515	10.0	0	True	NA	NA
PB.6981.18	chr2	+	2597	7	novel_not_in_catalog	RPE	novel	2569	6	NA	NA	2	-8	any annotated donor/acceptor	FALSE	canonical	1	984	junction_6	47232.32920951025	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	18	713	40.0	2	True	AATAAA	-17
PB.8182.8	chr3	-	3085	9	full-splice_match	CHDH	ENST00000315251.10	7665	9	51	4529	51	-4529	multi-exon	FALSE	canonical	1	37651	junction_8	32034.35125547847	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	388	2172	100.0	-3	True	NA	NA
PB.8182.9	chr3	-	3045	8	novel_in_catalog	CHDH	novel	7665	9	NA	NA	-52	-4529	no_combination_of_known_junctions	FALSE	canonical	1	8125	junction_2	46200.42716473606	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	491	1720	100.0	16	False	NA	NA
PB.8182.4	chr3	-	3663	8	novel_in_catalog	CHDH	novel	7665	9	NA	NA	-36	-4529	intron_retention	FALSE	canonical	1	37651	junction_7	34165.21707162155	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	475	1980	100.0	-8	True	NA	NA
PB.8182.5	chr3	-	3344	9	novel_not_in_catalog	CHDH	novel	7665	9	NA	NA	53	-4529	any annotated donor/acceptor	FALSE	canonical	1	9267	junction_8	39026.955676293466	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	647	2431	100.0	-1	True	NA	NA
PB.8182.6	chr3	-	3289	10	novel_not_in_catalog	CHDH	novel	7665	9	NA	NA	-10	-4529	any annotated donor/acceptor	FALSE	canonical	1	3784	junction_3	48703.064586314955	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	449	1780	100.0	18	True	NA	NA
PB.9680.1	chr5	-	1672	1	full-splice_match	HEIH	ENST00000623091.1	1652	1	-23	3	-23	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-13	True	AGTAAA	-18
PB.8182.1	chr3	-	4165	8	novel_in_catalog	CHDH	novel	7665	9	NA	NA	-36	-4027	intron_retention	TRUE	canonical	1	37651	junction_7	34165.21707162155	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	475	1980	20.0	-8	True	AATAAA	-27
PB.8182.2	chr3	-	3597	9	full-splice_match	CHDH	ENST00000315251.10	7665	9	-25	4093	-25	-4093	multi-exon	FALSE	canonical	1	37651	junction_8	32034.35125547847	NA	2	NA	TRUE	NA	NA	NA	C	coding	594	1785	464	2248	25.0	3	True	AATACA	-13
PB.8182.3	chr3	-	3901	9	novel_not_in_catalog	CHDH	novel	7665	9	NA	NA	-11	-4036	any annotated donor/acceptor	FALSE	canonical	1	9267	junction_8	39026.955676293466	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	711	2495	25.0	17	True	AATAAA	-18
PB.2329.8	chr11	+	7093	41	full-splice_match	ARHGEF12	ENST00000397843.6	9660	41	-731	3298	-567	-422	multi-exon	FALSE	canonical	1	123353	junction_4	98037.63903765482	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	898	5532	15.0	1	True	AATAAA	-22
PB.2329.5	chr11	+	2532	19	novel_in_catalog	ARHGEF12	novel	6891	40	NA	NA	-585	1082	no_combination_of_known_junctions	FALSE	canonical	1	83802	junction_9	126803.32247848767	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1617	916	2532	55.0	-17	True	NA	NA
PB.2329.4	chr11	+	5774	40	full-splice_match	ARHGEF12	ENST00000356641.7	6891	40	-551	1668	-551	-1668	multi-exon	FALSE	canonical	1	219449	junction_3	82279.12812037958	NA	1	NA	TRUE	NA	NA	NA	C	coding	1525	4578	882	5459	70.0	-50	True	NA	NA
PB.2329.7	chr11	+	5813	41	full-splice_match	ARHGEF12	ENST00000397843.6	9660	41	-732	4579	-568	-1703	multi-exon	FALSE	canonical	1	123353	junction_4	98037.63903765482	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	899	5533	25.0	0	True	AATAAA	-17
PB.2329.6	chr11	+	4713	35	incomplete-splice_match	ARHGEF12	ENST00000356641.7	6891	40	-571	9197	-571	217	3prime_fragment	FALSE	canonical	1	219449	junction_3	82897.31296652545	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	902	4390	90.0	-3	True	NA	NA
PB.2329.1	chr11	+	2310	18	novel_in_catalog	ARHGEF12	novel	6891	40	NA	NA	-420	1082	no_combination_of_known_junctions	FALSE	canonical	1	83802	junction_8	108959.15286992407	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	751	2310	55.0	-1317	False	NA	NA
PB.2329.3	chr11	+	2358	19	incomplete-splice_match	ARHGEF12	ENST00000356641.7	6891	40	-348	38712	-348	1082	3prime_fragment	FALSE	canonical	1	219449	junction_3	82436.07330339127	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	679	2358	55.0	-1245	False	NA	NA
PB.2329.2	chr11	+	2616	20	incomplete-splice_match	ARHGEF12	ENST00000397843.6	9660	41	-713	41588	-549	1082	3prime_fragment	FALSE	canonical	1	123353	junction_4	107388.92376021249	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1737	880	2616	55.0	-48	True	NA	NA
PB.11102.1	chr8	+	1966	6	full-splice_match	GOLGA7	ENST00000518270.5	808	6	52	-1210	-34	-1	multi-exon	TRUE	canonical	1	14996	junction_1	236923.315420834	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	142	555	15.0	-17	True	AATAAA	-15
PB.11102.3	chr8	+	2955	5	novel_in_catalog	GOLGA7	novel	808	6	NA	NA	-11	0	intron_retention	FALSE	canonical	1	360665	junction_1	124398.1212466149	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	90	467	25.0	-118	False	AATAAA	-10
PB.11102.2	chr8	+	1878	6	full-splice_match	GOLGA7	ENST00000520817.5	1984	6	100	6	20	0	multi-exon	FALSE	canonical	1	360665	junction_1	111496.49273300036	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	59	472	25.0	0	True	AATAAA	-10
PB.11102.4	chr8	+	2089	5	full-splice_match	GOLGA7	ENST00000357743.8	2027	5	-68	6	24	0	multi-exon	FALSE	canonical	1	526808	junction_2	75238.95404808602	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	270	683	25.0	4	True	AATAAA	-10
PB.11373.2	chr8	-	4297	13	novel_not_in_catalog	ZC3H3	novel	3280	12	NA	NA	-12046	-8	any annotated donor/acceptor	TRUE	canonical	1	958	junction_12	54586.83753102839	NA	2	NA	TRUE	NA	NA	NA	A	coding	948	2847	1058	3904	10.0	16	True	AATAAA	-11
PB.11340.6	chr8	+	3577	3	full-splice_match	MYC	ENST00000524013.1	2150	3	-150	-1277	1	1215	multi-exon	FALSE	canonical	1	246286	junction_1	487283.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	567	1886	25.0	0	True	AATAAA	-17
PB.10744.10	chr7	-	2601	19	novel_not_in_catalog	PLOD3	novel	1098	7	NA	NA	253	-9	any annotated donor/acceptor	FALSE	canonical	1	3590	junction_3	243609.49667271963	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	147	2306	20.0	-6	True	AATAAA	-12
PB.10744.11	chr7	-	2485	18	novel_in_catalog	PLOD3	novel	1098	7	NA	NA	279	-9	combination_of_known_junctions	FALSE	canonical	1	20455	junction_2	245738.38181283989	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	121	2190	20.0	20	True	AATAAA	-12
PB.10744.13	chr7	-	1912	1	novel_in_catalog	PLOD3	novel	2920	19	NA	NA	80	226	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	143	432	1	432	90.0	-13	True	NA	NA
PB.1242.1	chr1	+	4769	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	43	-244	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	71326.6671168645	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1180	2334	30.0	0	True	TTTAAA	-14
PB.816.1	chr1	-	2291	1	incomplete-splice_match	MEX3A	ENST00000532414.2	6124	2	5272	2423	4978	-2423	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	5738	False	NA	NA
PB.1740.3	chr11	-	4359	20	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	-61	0	intron_retention	FALSE	canonical	1	6496	junction_14	35163.801601966945	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	748	1848	0.0	8081	False	AGTAAA	-13
PB.1740.2	chr11	-	2926	23	full-splice_match	ANO9	ENST00000332826.6	2542	23	-42	-342	-42	12	multi-exon	FALSE	canonical	1	24849	junction_19	36980.80282632804	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2349	128	2476	5.0	8100	False	AGTAAA	-30
PB.1740.1	chr11	-	3983	20	novel_in_catalog	ANO9	novel	2868	11	NA	NA	0	12	intron_retention	FALSE	canonical	1	24849	junction_16	36681.23168053532	NA	15	NA	TRUE	NA	NA	NA	C	coding	653	1962	86	2047	5.0	-39	True	AGTAAA	-30
PB.5724.2	chr19	+	1853	11	novel_not_in_catalog	PLPPR2	novel	2727	10	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	119640.96134267728	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	343	1374	15.0	-12	True	AATAAA	-42
PB.1740.7	chr11	-	3944	22	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	4	0	intron_retention	FALSE	canonical	1	7905	junction_7	42833.52786090982	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	82	1557	0.0	-35	True	AGTAAA	-13
PB.1740.6	chr11	-	4085	22	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	-45	0	intron_retention	FALSE	non_canonical	0	0	junction_6	44810.347278147805	NA	13	1	TRUE	NA	NA	NA	C	coding	311	936	131	1066	0.0	8097	False	AGTAAA	-13
PB.1740.5	chr11	-	4322	20	novel_in_catalog	ANO9	novel	2868	11	NA	NA	-24	0	intron_retention	FALSE	canonical	1	38370	junction_4	35062.355817905125	NA	6	NA	TRUE	NA	NA	NA	C	coding	613	1842	2048	3889	0.0	8118	False	AGTAAA	-13
PB.1740.4	chr11	-	4260	20	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	12933	junction_16	30241.407673820057	NA	1	1	TRUE	NA	NA	NA	C	coding	863	2592	86	2677	0.0	-39	True	AGTAAA	-13
PB.1740.9	chr11	-	3185	23	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	2	0	intron_retention	FALSE	canonical	1	7905	junction_9	43362.44822988746	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	1817	2752	0.0	-37	True	AGTAAA	-13
PB.1740.8	chr11	-	3706	21	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	-6	0	intron_retention	FALSE	canonical	1	6496	junction_15	40737.77790208985	NA	1	1	TRUE	NA	NA	NA	C	coding	366	1101	687	1787	0.0	-45	True	AGTAAA	-13
PB.8445.2	chr3	+	3954	17	novel_in_catalog	PLS1	novel	3706	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2720	junction_1	48316.04748226611	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	413	2302	35.0	1	True	AATAAA	-15
PB.8587.6	chr3	+	1855	11	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	328104	junction_10	1128538.6318320874	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	185	988	20.0	-2	True	AATAAA	-16
PB.6537.2	chr2	-	2408	3	full-splice_match	FAM136A	ENST00000460307.1	2398	3	-11	1	-11	-1	multi-exon	FALSE	canonical	1	82692	junction_2	173579.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	773	1096	15.0	-1	True	AATAAA	-21
PB.6537.3	chr2	-	1875	4	novel_not_in_catalog	FAM136A	novel	1810	3	NA	NA	15	-1	any annotated donor/acceptor	FALSE	canonical	1	28631	junction_2	177769.9672804405	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	240	563	15.0	-9	True	AATAAA	-21
PB.8372.8	chr3	-	2342	11	novel_not_in_catalog	TPRA1	novel	4235	13	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	1	23827	junction_5	165940.38336450834	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	341	850	30.0	0	True	AATAAA	-14
PB.6537.1	chr2	-	1742	3	full-splice_match	FAM136A	ENST00000037869.7	1810	3	66	2	-12	-1	multi-exon	FALSE	canonical	1	428905	junction_2	473.0	NA	16	NA	TRUE	NA	NA	NA	C	coding	138	417	14	430	15.0	2	True	AATAAA	-21
PB.6537.4	chr2	-	1994	4	full-splice_match	FAM136A	ENST00000450256.1	936	4	-25	-1033	9	-2	multi-exon	FALSE	canonical	1	5061	junction_2	184689.67592574187	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	360	683	15.0	-15	True	AATAAA	-20
PB.11340.9	chr8	+	2037	3	full-splice_match	MYC	ENST00000524013.1	2150	3	16	97	5	-97	multi-exon	FALSE	canonical	1	246286	junction_1	487283.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	401	1720	40.0	5	True	AATAAA	-18
PB.8445.3	chr3	+	3647	16	novel_not_in_catalog	PLS1	novel	3706	16	NA	NA	1	2	any annotated donor/acceptor	TRUE	canonical	1	55	junction_7	41378.23868406624	NA	2	1	TRUE	NA	NA	NA	C	coding	621	1866	128	1993	30.0	1	True	AATAAA	-17
PB.5413.4	chr18	-	3982	26	incomplete-splice_match	ROCK1	ENST00000635540.1	5656	34	-791	17911	40	622	3prime_fragment	FALSE	canonical	1	264009	junction_24	101931.20245145742	NA	1	1	TRUE	NA	NA	NA	B	coding	1027	3081	902	3982	75.0	-19	True	AATACA	-10
PB.11340.8	chr8	+	2108	4	novel_not_in_catalog	MYC	novel	2042	3	NA	NA	0	-22	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	518931.46763196646	NA	6	1	TRUE	NA	NA	NA	C	coding	439	1320	335	1654	35.0	0	True	AATAAA	-14
PB.11480.2	chr9	-	2772	2	intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11131	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	608	1827	573	2399	25.0	-9	True	NA	NA
PB.3018.4	chr12	+	1045	7	full-splice_match	RAN	ENST00000543796.5	2661	7	217	1399	0	-2	multi-exon	FALSE	canonical	1	777424	junction_6	1839906.91494622	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	42	692	35.0	25	True	AATAAA	-19
PB.11480.1	chr9	-	2872	3	intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2427	junction_1	862.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	608	1827	556	2382	25.0	8	True	NA	NA
PB.3018.1	chr12	+	2443	7	full-splice_match	RAN	ENST00000543796.5	2661	7	217	1	0	1	multi-exon	FALSE	canonical	1	777424	junction_6	1839906.91494622	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	42	692	25.0	25	True	AATATA	-20
PB.11480.7	chr9	-	3860	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	-25	1875	-25	-1875	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	608	1827	574	2400	65.0	-10	True	NA	NA
PB.3018.3	chr12	+	2135	7	full-splice_match	RAN	ENST00000543796.5	2661	7	195	331	-2	-329	multi-exon	FALSE	canonical	1	777424	junction_6	1839906.91494622	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	64	714	30.0	3	True	AATAAA	-17
PB.2335.1	chr11	+	2604	5	novel_not_in_catalog	JHY	novel	3147	9	NA	NA	425	1548	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	15112.871176169669	NA	1	NA	TRUE	NA	NA	NA	A	coding	307	924	344	1267	30.0	349	False	ATTAAA	-24
PB.11480.8	chr9	-	2413	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	1422	1875	1422	-1875	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	299	900	54	953	65.0	1437	False	NA	NA
PB.6588.3	chr2	+	3531	7	full-splice_match	KCMF1	ENST00000409785.8	7568	7	264	3773	264	-3773	multi-exon	FALSE	non_canonical	0	0	junction_4	367131.2272020955	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	96	1241	15.0	9	True	TATAAA	-18
PB.3912.6	chr15	+	4639	6	novel_in_catalog	RAB8B	novel	4943	8	NA	NA	1	-10	no_combination_of_known_junctions	FALSE	canonical	1	4744	junction_3	184855.34537643212	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	31	486	30.0	-11	True	NA	NA
PB.3912.7	chr15	+	4933	9	full-splice_match	RAB8B	ENST00000559927.1	755	9	-8	-4170	1	-16	multi-exon	FALSE	canonical	1	3118	junction_1	189468.95455440055	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	406	786	50.0	-11	True	NA	NA
PB.3912.4	chr15	+	2536	8	full-splice_match	RAB8B	ENST00000321437.8	4943	8	123	2284	-2	1819	multi-exon	FALSE	canonical	1	319918	junction_3	71382.8144772527	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	34	657	55.0	-14	True	NA	NA
PB.3912.5	chr15	+	4893	9	novel_not_in_catalog	RAB8B	novel	4943	8	NA	NA	-1	-36	any annotated donor/acceptor	FALSE	canonical	1	2490	junction_4	190324.89367128088	NA	4	NA	TRUE	NA	NA	NA	C	coding	123	372	395	766	65.0	-13	True	NA	NA
PB.3912.2	chr15	+	4849	9	novel_in_catalog	RAB8B	novel	4943	8	NA	NA	-12	-13	no_combination_of_known_junctions	FALSE	canonical	1	8325	junction_1	188466.24257140688	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	319	699	35.0	-24	True	NA	NA
PB.3912.3	chr15	+	4750	7	novel_in_catalog	RAB8B	novel	4943	8	NA	NA	-6	-13	no_combination_of_known_junctions	FALSE	canonical	1	1431	junction_2	169765.08961969576	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	220	600	35.0	-18	True	NA	NA
PB.3912.1	chr15	+	4657	8	full-splice_match	RAB8B	ENST00000321437.8	4943	8	250	36	113	-36	multi-exon	FALSE	canonical	1	319918	junction_3	71382.8144772527	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	150	530	65.0	-1073	False	NA	NA
PB.1555.2	chr10	-	3588	17	novel_in_catalog	ALDH18A1	novel	3359	18	NA	NA	15	7	intron_retention	TRUE	canonical	1	18012	junction_16	195975.4506405075	NA	1	NA	TRUE	NA	NA	NA	B	coding	829	2490	275	2764	15.0	-33	True	AATAAA	-18
PB.5643.6	chr19	-	3196	17	full-splice_match	RANBP3	ENST00000340578.10	3233	17	32	5	0	-5	multi-exon	FALSE	canonical	1	35628	junction_14	233807.8058351209	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	27	1730	25.0	-16	True	ATTAAA	-9
PB.1555.7	chr10	-	3477	18	novel_in_catalog	ALDH18A1	novel	3359	18	NA	NA	23	6	combination_of_known_junctions	FALSE	canonical	1	18012	junction_17	209058.05820456427	NA	0	NA	TRUE	NA	NA	NA	B	coding	795	2388	267	2654	15.0	-25	True	AATAAA	-17
PB.10985.7	chr8	+	1373	8	full-splice_match	FDFT1	ENST00000220584.8	2176	8	159	644	2	52	multi-exon	FALSE	canonical	1	2107054	junction_1	304246.2073588509	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	64	1317	20.0	29	True	CATAAA	-22
PB.1555.5	chr10	-	3111	17	novel_not_in_catalog	ALDH18A1	novel	3359	18	NA	NA	-5	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	218651.69141867183	NA	0	NA	TRUE	NA	NA	NA	B	coding	684	2055	233	2287	15.0	-53	True	AATAAA	-18
PB.3912.9	chr15	+	5152	8	full-splice_match	RAB8B	ENST00000321437.8	4943	8	134	-343	0	343	multi-exon	FALSE	canonical	1	319918	junction_3	71382.8144772527	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	23	646	80.0	-3	True	NA	NA
PB.8000.3	chr3	+	2643	19	full-splice_match	CNOT10	ENST00000328834.9	2815	19	170	2	-4	2	multi-exon	FALSE	canonical	1	230613	junction_7	52992.31440350106	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	147	2381	25.0	-7	True	ATTAAA	-16
PB.3056.34	chr13	+	3231	3	incomplete-splice_match	TNFRSF19	ENST00000382263.3	4151	10	88599	1	88599	-1	5prime_fragment	FALSE	canonical	1	93139	junction_1	5219.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	25	519	25.0	-4819	False	AATAAA	-20
PB.3056.37	chr13	+	2610	1	incomplete-splice_match	TNFRSF19	ENST00000403372.6	4277	8	103112	13	94102	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	684	False	AATAAA	-19
PB.3056.31	chr13	+	4021	9	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	2786	junction_6	45945.822722086225	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	182	1309	25.0	0	True	AATAAA	-20
PB.3056.30	chr13	+	4144	10	full-splice_match	TNFRSF19	ENST00000382263.3	4151	10	4	3	4	-3	multi-exon	FALSE	canonical	1	30565	junction_1	31840.415219235652	NA	34	NA	TRUE	NA	NA	NA	C	coding	417	1254	181	1434	20.0	1	True	AATAAA	-18
PB.7703.5	chr22	-	2363	14	novel_in_catalog	PES1	novel	2295	15	NA	NA	-6	0	intron_retention	FALSE	canonical	1	342052	junction_1	206353.81831916614	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	999	1949	20.0	13	True	ATTAAA	-19
PB.8000.4	chr3	+	2397	18	full-splice_match	CNOT10	ENST00000331889.10	2573	18	174	2	0	-2	multi-exon	FALSE	canonical	1	27001	junction_12	82667.04873172769	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	143	2296	30.0	-3	True	AATAAA	-18
PB.3619.14	chr14	-	3399	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	15493	junction_15	209392.52935908566	NA	9	NA	TRUE	NA	NA	NA	B	coding	833	2502	280	2781	15.0	13	True	ATTAAA	-16
PB.12115.1	chrX	-	2184	5	full-splice_match	ZC4H2	ENST00000374839.7	2184	5	-1	1	-1	0	multi-exon	FALSE	canonical	1	87350	junction_4	20467.415787050402	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	109	783	10.0	1	True	AATACA	-19
PB.12115.2	chrX	-	2043	5	full-splice_match	ZC4H2	ENST00000374839.7	2184	5	34	107	23	0	multi-exon	FALSE	canonical	1	87350	junction_4	20467.415787050402	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	74	748	30.0	-1	True	TATAAA	-19
PB.5716.1	chr19	+	1406	2	full-splice_match	TIMM29	ENST00000270502.6	1425	2	17	2	17	-2	multi-exon	FALSE	canonical	1	93596	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	260	783	74	856	15.0	3	True	AATAAA	-25
PB.3619.10	chr14	-	3503	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	15493	junction_15	206123.6284375202	NA	5	NA	TRUE	NA	NA	NA	B	coding	820	2463	293	2755	20.0	0	True	ATTAAA	-19
PB.3619.11	chr14	-	3377	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	1	15493	junction_15	206123.6284375202	NA	1	NA	TRUE	NA	NA	NA	B	coding	820	2463	294	2756	20.0	-1	True	ATTAAA	-19
PB.3619.12	chr14	-	3320	16	novel_not_in_catalog	PPP4R3A	novel	4108	15	NA	NA	20	-1	any annotated donor/acceptor	FALSE	canonical	1	1177	junction_15	211509.19681371358	NA	1	NA	TRUE	NA	NA	NA	B	coding	833	2502	200	2701	20.0	19	True	ATTAAA	-17
PB.3619.13	chr14	-	3284	16	novel_not_in_catalog	PPP4R3A	novel	4108	15	NA	NA	17	-1	any annotated donor/acceptor	FALSE	canonical	1	1177	junction_15	208284.45902898168	NA	0	NA	TRUE	NA	NA	NA	B	coding	820	2463	203	2665	20.0	16	True	ATTAAA	-17
PB.2782.4	chr12	-	2882	2	full-splice_match	CCDC59	ENST00000552606.1	600	2	-5	-2277	-5	-1733	multi-exon	FALSE	canonical	1	154523	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	39	533	85.0	379	False	AATAAA	-45
PB.10324.3	chr6	+	2935	1	antisense	novelGene_TBXT_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	136	411	978	1388	10.0	111	False	TATAAA	-28
PB.8445.1	chr3	+	3695	16	full-splice_match	PLS1	ENST00000457734.6	3706	16	8	3	8	2	multi-exon	FALSE	canonical	1	81434	junction_1	23740.41383707444	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	152	2041	30.0	-23	True	AATAAA	-17
PB.4775.1	chr17	+	1142	4	full-splice_match	ADPRM	ENST00000379774.4	1209	4	28	39	6	-36	multi-exon	FALSE	canonical	1	38958	junction_1	50372.029310807884	NA	0	NA	TRUE	NA	NA	NA	A	coding	342	1029	64	1092	75.0	-12	True	NA	NA
PB.3928.5	chr15	-	1886	10	novel_in_catalog	SPG21	novel	1822	9	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	1	8157	junction_8	426578.54370225396	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	364	1290	15.0	12	True	AATAAA	-15
PB.3928.4	chr15	-	1725	8	novel_in_catalog	SPG21	novel	1822	9	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	25296	junction_7	381772.8709925816	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	664	1128	15.0	11	False	AATAAA	-16
PB.3928.1	chr15	-	2115	11	novel_not_in_catalog	SPG21	novel	1822	9	NA	NA	-19	7948	any annotated donor/acceptor	FALSE	canonical	1	30100	junction_1	413289.6256034623	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	195	1121	80.0	-4	True	NA	NA
PB.3928.3	chr15	-	1681	9	full-splice_match	SPG21	ENST00000204566.6	1822	9	139	2	18	-2	multi-exon	FALSE	canonical	1	343010	junction_8	282515.6890924102	NA	3	1	TRUE	NA	NA	NA	C	coding	308	927	158	1084	15.0	33	True	AATAAA	-16
PB.3928.2	chr15	-	2455	10	novel_in_catalog	SPG21	novel	1822	9	NA	NA	-5	-2	combination_of_known_junctions	TRUE	canonical	1	9292	junction_8	426368.61794099427	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	932	1858	15.0	-6	True	AATAAA	-16
PB.5992.4	chr19	+	3762	28	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	288070.41160958604	NA	4	NA	TRUE	NA	NA	NA	C	coding	768	2307	144	2450	20.0	0	True	AATAAA	-18
PB.5992.5	chr19	+	3603	29	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	0	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	311531.98299972113	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	66	3329	0.0	0	True	AATAAA	-25
PB.5992.6	chr19	+	3653	29	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	283256.5043303129	NA	2	NA	TRUE	NA	NA	NA	C	coding	1087	3264	123	3386	20.0	21	True	AATAAA	-18
PB.5992.7	chr19	+	3788	28	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_3	268233.0783352961	NA	1	NA	TRUE	NA	NA	NA	C	coding	1087	3264	258	3521	20.0	-16	True	AATAAA	-18
PB.5992.1	chr19	+	3703	29	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	-9	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	327749.5843584029	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	1694	3436	20.0	-9	True	AATAAA	-18
PB.5992.2	chr19	+	3618	29	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	328888.66360141424	NA	2	1	TRUE	NA	NA	NA	C	coding	884	2655	148	2802	20.0	-4	True	AATAAA	-17
PB.5992.3	chr19	+	4739	28	novel_in_catalog	SUPT5H	novel	558	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	396897	junction_1	222245.15914173902	NA	1	NA	TRUE	NA	NA	NA	C	coding	946	2841	1632	4472	20.0	0	True	AATAAA	-18
PB.765.7	chr1	-	1970	12	novel_in_catalog	ILF2	novel	1906	14	NA	NA	-5	1	intron_retention	FALSE	canonical	1	1632815	junction_9	1056954.2478702075	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	66	1004	0.0	-1	True	ATTAAA	-17
PB.5992.8	chr19	+	3761	28	full-splice_match	SUPT5H	ENST00000359191.10	3770	28	5	4	5	0	multi-exon	FALSE	canonical	1	82215	junction_3	257592.51138594456	NA	0	NA	TRUE	NA	NA	NA	C	coding	1083	3252	243	3494	20.0	-1	True	AATAAA	-18
PB.5992.9	chr19	+	3299	26	novel_not_in_catalog	SUPT5H	novel	558	6	NA	NA	118	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	332149.0531005043	NA	16	2	TRUE	NA	NA	NA	C	coding	980	2943	90	3032	20.0	-7550	False	AATAAA	-18
PB.9345.10	chr5	-	1951	8	full-splice_match	ARRDC3	ENST00000265138.3	4188	8	42	2195	42	-121	multi-exon	FALSE	canonical	1	366046	junction_6	59116.29947201792	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	226	1470	45.0	-1	True	AAAACA	-25
PB.2782.1	chr12	-	1593	4	full-splice_match	CCDC59	ENST00000256151.7	1983	4	390	0	-2	0	multi-exon	FALSE	canonical	1	83894	junction_2	73248.27360422906	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	23	748	45.0	-12	True	AATAAA	-18
PB.12008.7	chrX	+	2185	12	full-splice_match	PDK3	ENST00000441463.2	1921	12	-185	-79	1	79	multi-exon	FALSE	canonical	1	81457	junction_1	34170.78279190528	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	186	1433	20.0	-18	True	NA	NA
PB.12008.6	chrX	+	1656	12	full-splice_match	PDK3	ENST00000441463.2	1921	12	-196	461	-10	-461	multi-exon	FALSE	canonical	1	81457	junction_1	34170.78279190528	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	197	1444	10.0	-29	True	ACTAAA	-21
PB.12008.5	chrX	+	1797	3	incomplete-splice_match	PDK3	ENST00000379162.8	1809	11	39	34244	-10	1100	3prime_fragment	FALSE	canonical	1	81457	junction_1	22266.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	197	520	85.0	-29	True	NA	NA
PB.12008.4	chrX	+	3124	12	full-splice_match	PDK3	ENST00000441463.2	1921	12	-197	-1006	-11	1006	multi-exon	FALSE	canonical	1	81457	junction_1	34170.78279190528	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	198	1445	75.0	-30	True	CATAAA	-7
PB.12008.3	chrX	+	2348	12	full-splice_match	PDK3	ENST00000441463.2	1921	12	-205	-222	-19	222	multi-exon	FALSE	canonical	1	81457	junction_1	34170.78279190528	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	206	1453	30.0	-38	True	AATAGA	-12
PB.2782.2	chr12	-	1043	4	full-splice_match	CCDC59	ENST00000256151.7	1983	4	395	545	3	-4	multi-exon	FALSE	canonical	1	83894	junction_2	73248.27360422906	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	18	743	55.0	-7	True	AATAAA	-7
PB.12008.1	chrX	+	1503	11	full-splice_match	PDK3	ENST00000379162.8	1809	11	17	289	17	-289	multi-exon	FALSE	canonical	1	81457	junction_1	32628.985686962442	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	219	1439	20.0	-51	True	AATAAA	-17
PB.10854.7	chr7	-	2160	9	novel_in_catalog	SLC35B4	novel	6797	10	NA	NA	55	741	no_combination_of_known_junctions	FALSE	canonical	1	1884	junction_7	68733.65094867561	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	455	1138	95.0	-67	True	NA	NA
PB.1838.5	chr11	-	6937	33	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	-3	-1494	combination_of_known_junctions	FALSE	canonical	1	129640	junction_32	68876.41292016464	NA	1	NA	TRUE	NA	NA	NA	B	coding	1686	5061	205	5265	50.0	-23	True	AATAAA	-8
PB.1838.4	chr11	-	7190	33	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	-12	-1217	combination_of_known_junctions	FALSE	canonical	1	129640	junction_32	68876.41292016464	NA	1	NA	TRUE	NA	NA	NA	B	coding	1686	5061	181	5241	20.0	1	True	ATTAAA	-21
PB.1838.7	chr11	-	6742	33	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	-8	-1694	combination_of_known_junctions	FALSE	canonical	1	129640	junction_32	68876.41292016464	NA	0	NA	TRUE	NA	NA	NA	B	coding	1686	5061	210	5270	85.0	-28	True	NA	NA
PB.3247.4	chr13	+	2401	11	full-splice_match	BIVM	ENST00000257336.5	3859	11	70	1388	70	-18	multi-exon	FALSE	canonical	1	22874	junction_1	56783.650414533935	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	610	2121	60.0	0	True	AATAAA	-17
PB.1838.1	chr11	-	8442	33	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	1	15	combination_of_known_junctions	FALSE	canonical	1	129640	junction_32	68876.41292016464	NA	0	NA	TRUE	NA	NA	NA	B	coding	1686	5061	201	5261	25.0	-19	True	AATAAA	-20
PB.12008.8	chrX	+	3729	1	novel_in_catalog	PDK3	novel	1809	11	NA	NA	28824	-7132	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	TTTAAA	-13
PB.637.5	chr1	+	1574	4	incomplete-splice_match	VANGL1	ENST00000355485.6	8691	8	9	33456	9	-19308	3prime_fragment	FALSE	canonical	1	46602	junction_1	57310.23376520307	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	263	1078	35.0	-8	True	AATAAA	-12
PB.8704.10	chr4	-	3899	10	full-splice_match	FBXL5	ENST00000507700.5	2306	10	-43	-1550	-2	1550	multi-exon	FALSE	canonical	1	367659	junction_9	121961.41170281364	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	98	2110	40.0	-35	True	AATAAA	-13
PB.5370.1	chr18	+	3200	1	novel_in_catalog	DLGAP1-AS1	novel	1966	3	NA	NA	51	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	111	336	608	943	20.0	0	True	AATAAA	-19
PB.11308.1	chr8	+	2921	3	incomplete-splice_match	MED30	ENST00000297347.7	985	4	-3	7122	-3	4235	3prime_fragment	FALSE	canonical	1	348499	junction_2	23235.0	NA	7	NA	TRUE	NA	NA	NA	B	coding	140	423	198	620	35.0	-22	True	AATAAA	-10
PB.6353.11	chr2	-	4601	22	novel_in_catalog	ADCY3	novel	5050	21	NA	NA	-53	-1	combination_of_known_junctions	FALSE	canonical	1	125047	junction_21	72529.43595965607	NA	0	NA	TRUE	NA	NA	NA	B	coding	1144	3435	408	3842	35.0	12	True	ATTAAA	-16
PB.8587.9	chr3	+	3125	10	incomplete-splice_match	EIF4A2	ENST00000425053.5	1977	12	-1	-12	1	-1	intron_retention	FALSE	canonical	1	1549925	junction_3	745208.5559195683	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	36	1118	20.0	-1	True	AATAAA	-15
PB.8993.4	chr4	+	2246	2	full-splice_match	RAB33B	ENST00000305626.5	4562	2	370	1946	370	-1946	multi-exon	FALSE	canonical	1	146785	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	229	690	20	709	40.0	2	True	AATAAA	-20
PB.8381.5	chr3	-	3845	9	novel_in_catalog	RPN1	novel	2314	10	NA	NA	0	-6	intron_retention	FALSE	canonical	1	2140963	junction_8	531205.6841238029	NA	2	NA	TRUE	NA	NA	NA	C	coding	609	1830	17	1846	15.0	1	True	AATAAA	-13
PB.1221.14	chr1	-	5737	19	novel_in_catalog	NID1	novel	5412	17	NA	NA	-11	-12	no_combination_of_known_junctions	FALSE	canonical	1	4131	junction_10	124063.38881344706	NA	0	NA	TRUE	NA	NA	NA	C	coding	1205	3618	95	3712	50.0	2813	False	AATAAA	-8
PB.7024.19	chr2	+	2313	13	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	22558	junction_10	172738.27906424328	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	236	1747	30.0	-2	True	AATAAA	-12
PB.3803.1	chr15	+	2090	5	full-splice_match	GANC	ENST00000440615.6	1437	5	-627	-26	-43	26	multi-exon	FALSE	canonical	1	46527	junction_3	32380.13539579475	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	868	1716	50.0	-9	True	ATTAAA	-19
PB.7024.16	chr2	+	2467	14	novel_not_in_catalog	ANKZF1	novel	2579	14	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	11384	junction_10	148698.23999495633	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	103	1902	25.0	-9	True	AATAAA	-11
PB.3803.2	chr15	+	4704	25	novel_not_in_catalog	GANC	novel	940	2	NA	NA	-164	1557	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	24993.461163170865	NA	5	NA	TRUE	NA	NA	NA	C	coding	914	2745	434	3178	15.0	-6	True	ATTAAA	-18
PB.3803.4	chr15	+	4485	25	novel_not_in_catalog	GANC	novel	940	2	NA	NA	-15	1557	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	24993.46116317087	NA	10	1	TRUE	NA	NA	NA	C	coding	914	2745	256	3000	15.0	-15	True	ATTAAA	-18
PB.8388.1	chr3	+	4039	2	intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7335	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-29	True	NA	NA
PB.10235.7	chr6	+	5297	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	33	-7	intron_retention	FALSE	canonical	1	18466	junction_1	243199.31130054875	NA	13	NA	TRUE	NA	NA	NA	C	coding	617	1854	1459	3312	35.0	-12	True	AATAAA	-42
PB.10235.6	chr6	+	3341	9	full-splice_match	TNFAIP3	ENST00000237289.8	4432	9	-197	1288	33	-724	multi-exon	FALSE	canonical	1	126053	junction_1	205414.7679330773	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	264	2636	25.0	-12	True	TTTAAA	-21
PB.10235.5	chr6	+	4389	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-24	-6	intron_retention	FALSE	canonical	1	13462	junction_7	283464.7914271124	NA	6	NA	TRUE	NA	NA	NA	C	coding	689	2070	213	2282	35.0	-9926	False	AATAAA	-43
PB.10235.4	chr6	+	4615	10	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	15	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	277382.81240984466	NA	24	1	TRUE	NA	NA	NA	C	coding	790	2373	257	2629	35.0	0	True	AATAAA	-43
PB.10235.3	chr6	+	4511	9	full-splice_match	TNFAIP3	ENST00000612899.4	4735	9	20	204	-6	-204	multi-exon	FALSE	canonical	1	73954	junction_1	220346.79284223626	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	351	2723	25.0	-9990	False	AATAAA	-39
PB.10235.2	chr6	+	4464	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	37	-6	intron_retention	FALSE	canonical	1	10015	junction_3	269718.5612554084	NA	6	2	TRUE	NA	NA	NA	C	coding	493	1482	997	2478	35.0	-9865	False	AATAAA	-43
PB.10235.1	chr6	+	4724	10	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-867	-2	intron_retention	FALSE	canonical	1	5519	junction_1	288611.76974618464	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	362	2734	30.0	4	True	AATAAA	-11
PB.9570.33	chr5	-	2328	2	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	-2	-1142	intron_retention	FALSE	canonical	1	64815	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	100	423	80.0	-1	True	NA	NA
PB.7540.6	chr21	+	1995	11	novel_not_in_catalog	PKNOX1	novel	5003	11	NA	NA	-23	378	any annotated donor/acceptor	FALSE	canonical	1	2153	junction_7	51119.83783385859	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	86	1387	35.0	-2	True	GATAAA	-12
PB.7540.5	chr21	+	1614	11	full-splice_match	PKNOX1	ENST00000291547.9	5003	11	49	3340	24	28	multi-exon	FALSE	canonical	1	86091	junction_1	27294.876428370215	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	166	1473	20.0	-3	True	NA	NA
PB.7540.4	chr21	+	2305	11	full-splice_match	PKNOX1	ENST00000291547.9	5003	11	38	2660	13	591	multi-exon	FALSE	canonical	1	86091	junction_1	27294.876428370215	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	177	1484	40.0	-14	True	TATAAA	-19
PB.7540.2	chr21	+	2059	11	full-splice_match	PKNOX1	ENST00000291547.9	5003	11	125	2819	-27	432	multi-exon	FALSE	canonical	1	86091	junction_1	27294.876428370215	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	90	1397	45.0	-6	True	GATAAA	-11
PB.7540.1	chr21	+	4906	11	full-splice_match	PKNOX1	ENST00000291547.9	5003	11	129	-32	-23	32	multi-exon	FALSE	canonical	1	86091	junction_1	27294.876428370215	NA	5	NA	TRUE	NA	NA	NA	C	coding	435	1308	86	1393	25.0	-2	True	TATAAA	-13
PB.10235.8	chr6	+	4586	9	full-splice_match	TNFAIP3	ENST00000237289.8	4432	9	-181	27	49	-26	multi-exon	FALSE	canonical	1	126053	junction_1	205414.7679330773	NA	100	3	TRUE	NA	NA	NA	C	coding	790	2373	248	2620	55.0	4	True	AATAAA	-23
PB.11538.29	chr9	+	2122	15	full-splice_match	MELK	ENST00000536987.5	2125	15	2	1	0	-1	multi-exon	FALSE	canonical	1	10533	junction_1	117800.9268058245	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	217	1779	10.0	0	True	AATAAA	-15
PB.5380.4	chr18	+	2892	18	incomplete-splice_match	PTPRM	ENST00000400053.8	5292	31	388672	-4	21793	-1	5prime_fragment	FALSE	canonical	1	135016	junction_16	48925.567223259124	NA	1	NA	TRUE	NA	NA	NA	B	coding	689	2070	125	2194	30.0	NA	False	ATTAAA	-20
PB.510.1	chr1	-	3938	6	full-splice_match	DDAH1	ENST00000284031.12	3920	6	-19	1	-19	0	multi-exon	FALSE	canonical	1	184713	junction_5	104074.28254011652	NA	1	NA	TRUE	NA	NA	NA	A	coding	285	858	115	972	25.0	-1	True	AATAAA	-19
PB.7024.10	chr2	+	4837	10	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-6	0	intron_retention	FALSE	canonical	1	277850	junction_5	118833.48910986622	NA	4	1	TRUE	NA	NA	NA	C	coding	361	1086	1828	2913	30.0	-17	True	AATAAA	-12
PB.11538.28	chr9	+	2239	16	novel_in_catalog	MELK	novel	2485	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	58120	junction_11	110178.86937065363	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	163	1896	10.0	0	True	AATAAA	-15
PB.10134.11	chr6	+	4319	19	novel_not_in_catalog	CRYBG1	novel	9909	22	NA	NA	10410	-16	any annotated donor/acceptor	FALSE	canonical	1	81	junction_1	78530.86067448065	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	708	2441	35.0	-5075	False	AATAAA	-14
PB.7024.11	chr2	+	3193	12	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-6	0	intron_retention	FALSE	canonical	1	228499	junction_2	118880.69950094806	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	111	1391	30.0	-17	True	AATAAA	-12
PB.10134.10	chr6	+	2985	5	novel_not_in_catalog	CRYBG1	novel	9909	22	NA	NA	9284	-12611	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	106654.88354120265	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	58	687	85.0	0	True	AATAGA	-38
PB.6850.7	chr2	-	4948	8	full-splice_match	WIPF1	ENST00000392547.6	4587	8	-364	3	-338	-3	multi-exon	FALSE	canonical	1	113671	junction_7	205514.79251153974	NA	5	NA	TRUE	NA	NA	NA	C	coding	503	1512	465	1976	20.0	-339	False	AATAAA	-14
PB.6850.5	chr2	-	4862	9	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	-37	-3	intron_retention	FALSE	canonical	1	208	junction_8	225932.2254847333	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	379	1890	20.0	-18	False	AATAAA	-14
PB.1802.2	chr11	-	2522	13	novel_in_catalog	STK33	novel	1325	5	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	3866	junction_12	18033.502208659367	NA	4	1	TRUE	NA	NA	NA	C	coding	514	1545	339	1883	35.0	-35	True	AATAAA	-19
PB.1802.3	chr11	-	2653	16	novel_not_in_catalog	STK33	novel	1325	5	NA	NA	0	143	any annotated donor/acceptor	FALSE	canonical	1	3081	junction_14	24950.214258175998	NA	5	NA	TRUE	NA	NA	NA	C	coding	514	1545	643	2187	30.0	-35	True	AATAAA	-21
PB.1802.1	chr11	-	2840	13	full-splice_match	STK33	ENST00000396672.5	2558	13	-282	0	-10	0	multi-exon	FALSE	canonical	1	1934	junction_12	18482.11285927709	NA	15	NA	TRUE	NA	NA	NA	C	coding	514	1545	657	2201	35.0	-14	True	AATAAA	-19
PB.10627.4	chr7	-	3578	3	novel_not_in_catalog	YWHAG	novel	3750	2	NA	NA	-7	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	757996.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	247	744	231	974	15.0	-22	False	AATAAA	-18
PB.771.10	chr1	-	2427	4	full-splice_match	SLC39A1	ENST00000368621.5	2398	4	-29	0	1	0	multi-exon	FALSE	canonical	1	31411	junction_3	583295.808534191	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	466	1440	25.0	4232	False	AATAAA	-15
PB.6556.2	chr2	+	965	6	full-splice_match	DGUOK	ENST00000629438.2	1029	6	64	0	-3	0	multi-exon	FALSE	canonical	1	454885	junction_3	392298.6297559552	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	203	742	25.0	10	True	AATAAA	-28
PB.6850.8	chr2	-	4330	9	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	-3	intron_retention	TRUE	non_canonical	0	0	junction_4	225980.09368080273	NA	17	NA	TRUE	NA	NA	NA	C	coding	371	1116	243	1358	20.0	-1	True	AATAAA	-14
PB.6850.9	chr2	-	4265	8	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	219162.16460094435	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	243	767	20.0	-1	True	AATAAA	-14
PB.8497.9	chr3	+	2544	9	incomplete-splice_match	SMC4	ENST00000462787.5	5033	22	-31	17658	-1	-71	3prime_fragment	FALSE	canonical	1	296672	junction_1	177084.7089593971	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1353	1191	2543	80.0	-13	True	AATGAA	-32
PB.7143.15	chr20	+	3166	21	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3922	junction_1	194841.44805700352	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	250	2631	20.0	0	True	AATAAA	-16
PB.8455.15	chr3	-	3413	5	novel_not_in_catalog	PLSCR1	novel	2233	9	NA	NA	-27	-1588	any annotated donor/acceptor	FALSE	canonical	1	611	junction_1	259455.0264741223	NA	3	NA	TRUE	NA	NA	NA	C	coding	100	303	2089	2391	85.0	188	False	NA	NA
PB.8455.14	chr3	-	4187	3	incomplete-splice_match	PLSCR1	ENST00000469266.1	1257	4	120	1588	13	-1588	3prime_fragment	FALSE	canonical	1	546384	junction_2	29831.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	2863	3165	85.0	-1	True	NA	NA
PB.8497.1	chr3	+	1530	10	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	346	18559	0	0	3prime_fragment	FALSE	canonical	1	293192	junction_1	190775.72469147004	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1425	106	1530	60.0	0	True	ATTAAA	-44
PB.8455.16	chr3	-	5873	1	novel_in_catalog	PLSCR1	novel	2233	9	NA	NA	14	2119	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.8455.11	chr3	-	1292	9	full-splice_match	PLSCR1	ENST00000342435.8	2233	9	320	621	3	1	multi-exon	FALSE	canonical	1	330513	junction_5	132391.8543169646	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	92	1048	40.0	10	True	AAAAAG	-41
PB.8455.10	chr3	-	1513	9	full-splice_match	PLSCR1	ENST00000342435.8	2233	9	217	503	-6	119	multi-exon	FALSE	canonical	1	330513	junction_5	132391.8543169646	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	195	1151	35.0	6	True	ATTAAA	-14
PB.8455.13	chr3	-	5031	7	novel_in_catalog	PLSCR1	novel	2233	9	NA	NA	15	1	intron_retention	FALSE	canonical	1	330513	junction_3	139440.08184481566	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	153	527	40.0	1	True	AAAAAG	-41
PB.7143.13	chr20	+	2570	20	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	8	-309	no_combination_of_known_junctions	FALSE	canonical	1	19917	junction_12	257030.0291457279	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	386	2344	25.0	-14	True	ATTAAA	-21
PB.10976.2	chr8	+	3667	7	full-splice_match	ERI1	ENST00000250263.7	4615	7	93	855	6	-854	multi-exon	FALSE	canonical	1	154351	junction_1	25092.211793037826	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	168	1217	40.0	0	True	NA	NA
PB.6757.21	chr2	+	2754	4	incomplete-splice_match	UBXN4	ENST00000490163.5	3394	9	22095	-7	3800	7	5prime_fragment	FALSE	canonical	1	785789	junction_2	68846.41055437984	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	145	579	10.0	-8127	False	NA	NA
PB.6917.2	chr2	-	6871	28	novel_not_in_catalog	HECW2	novel	12180	29	NA	NA	-47349	246	any annotated donor/acceptor	FALSE	canonical	1	5437	junction_27	18933.947091715432	NA	0	NA	TRUE	NA	NA	NA	B	coding	1448	4347	253	4599	50.0	-19	False	AATAAA	-13
PB.10576.3	chr7	+	4728	4	full-splice_match	KCTD7	ENST00000275532.8	4795	4	93	-26	35	11	multi-exon	FALSE	canonical	1	4310	junction_3	41999.518695654915	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	88	864	15.0	46	True	ATTAAA	-11
PB.10576.2	chr7	+	2495	4	full-splice_match	KCTD7	ENST00000639828.1	5951	4	271	3185	-15	265	multi-exon	FALSE	canonical	1	61776	junction_1	20817.86448115069	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	28	897	80.0	-15	True	NA	NA
PB.10576.1	chr7	+	4765	4	full-splice_match	KCTD7	ENST00000639828.1	5951	4	216	970	40	13	multi-exon	FALSE	canonical	1	61776	junction_1	20817.86448115069	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	83	952	10.0	51	True	ATTAAA	-13
PB.7143.11	chr20	+	3152	24	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	2	-289	any annotated donor/acceptor	FALSE	canonical	1	939	junction_1	253917.97355906898	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	525	2906	25.0	-20	True	ATTAAA	-41
PB.6478.3	chr2	+	3687	13	novel_in_catalog	VRK2	novel	2657	19	NA	NA	-10	1738	intron_retention	FALSE	canonical	1	34560	junction_1	84208.3343715982	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	196	1722	35.0	-55	True	AGTAAA	-24
PB.10134.18	chr6	+	2702	6	incomplete-splice_match	CRYBG1	ENST00000369066.7	7553	20	43911	5	11182	-5	5prime_fragment	FALSE	canonical	1	285383	junction_1	28990.394813455023	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	82	813	30.0	-5522	False	AATAAA	-25
PB.379.27	chr1	-	3275	12	full-splice_match	GPBP1L1	ENST00000290795.7	3599	12	15	309	15	-307	multi-exon	FALSE	canonical	1	102794	junction_11	209699.26335907535	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	1208	2632	40.0	5	True	TATAAA	-15
PB.11278.3	chr8	-	2607	4	full-splice_match	ZNF706	ENST00000311212.8	2615	4	0	8	0	-8	multi-exon	FALSE	canonical	1	103246	junction_3	63678.60431887621	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	185	415	55.0	56	True	ATTAAA	-10
PB.9174.8	chr5	+	3762	18	full-splice_match	RAI14	ENST00000265109.7	5092	18	95	1235	-67	474	multi-exon	FALSE	canonical	1	211350	junction_10	91517.54565079111	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	193	3135	55.0	4	True	ACTAAA	-12
PB.9174.9	chr5	+	1993	15	incomplete-splice_match	RAI14	ENST00000265109.7	5092	18	107	8972	-55	1822	3prime_fragment	FALSE	canonical	1	211350	junction_10	95115.15673701612	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1812	181	1992	60.0	16	True	NA	NA
PB.1641.3	chr10	+	810	6	full-splice_match	GSTO1	ENST00000369713.9	972	6	158	4	-93	-4	multi-exon	FALSE	canonical	1	1286516	junction_5	425291.5971567743	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	37	762	45.0	-8	True	AATAAA	-26
PB.1641.2	chr10	+	2885	6	full-splice_match	GSTO1	ENST00000369713.9	972	6	123	-2036	123	2034	multi-exon	FALSE	canonical	1	1286516	junction_5	425291.5971567743	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	72	797	30.0	-1116	False	AATAAA	-20
PB.1641.1	chr10	+	3322	6	full-splice_match	GSTO1	ENST00000369713.9	972	6	114	-2464	114	2462	multi-exon	FALSE	canonical	1	1286516	junction_5	425291.5971567743	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	81	806	35.0	-1125	False	NA	NA
PB.9174.3	chr5	+	4823	17	full-splice_match	RAI14	ENST00000512629.5	2941	17	-36	-1846	2	0	multi-exon	FALSE	canonical	1	210622	junction_10	90064.89885667169	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	122	2977	10.0	1	True	AATAAA	-16
PB.9174.4	chr5	+	1896	15	novel_in_catalog	RAI14	novel	5092	18	NA	NA	37	1639	combination_of_known_junctions	FALSE	canonical	1	21115	junction_3	128754.8862583792	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1587	309	1895	70.0	2	True	AATAAA	-33
PB.9174.5	chr5	+	3184	18	full-splice_match	RAI14	ENST00000265109.7	5092	18	66	1842	66	0	multi-exon	FALSE	canonical	1	211350	junction_10	91517.54565079111	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	222	3164	10.0	-25	True	AGTAAA	-20
PB.9174.6	chr5	+	2629	15	incomplete-splice_match	RAI14	ENST00000265109.7	5092	18	91	8352	-71	2442	3prime_fragment	FALSE	canonical	1	211350	junction_10	95115.15673701612	NA	2	NA	TRUE	NA	NA	NA	C	coding	811	2433	197	2629	55.0	0	True	ATTAAA	-11
PB.1641.4	chr10	+	3814	5	novel_in_catalog	GSTO1	novel	547	5	NA	NA	-92	-5	intron_retention	FALSE	canonical	1	1286516	junction_4	475031.35203768394	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	36	539	45.0	-7	True	AATAAA	-25
PB.1859.2	chr11	+	5646	21	novel_not_in_catalog	ANO5	novel	6656	24	NA	NA	-144	-1091	any annotated donor/acceptor	FALSE	canonical	1	11785	junction_2	9700.010832339312	NA	5	NA	TRUE	NA	NA	NA	B	coding	898	2697	462	3158	50.0	-53	True	AATAAA	-19
PB.1859.3	chr11	+	6751	21	novel_in_catalog	ANO5	novel	6656	24	NA	NA	-143	-1	no_combination_of_known_junctions	FALSE	canonical	1	19323	junction_3	8745.07744662676	NA	3	NA	TRUE	NA	NA	NA	B	coding	899	2700	461	3160	35.0	-52	True	AATAAA	-19
PB.10594.5	chr7	-	3412	13	incomplete-splice_match	BAZ1B	ENST00000404251.1	5428	19	282	18054	276	2845	3prime_fragment	FALSE	canonical	1	274354	junction_12	116544.66491531143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3348	64	3411	65.0	33	True	CATAAA	-33
PB.1859.1	chr11	+	6125	21	novel_in_catalog	ANO5	novel	6656	24	NA	NA	-144	-615	no_combination_of_known_junctions	FALSE	canonical	1	19323	junction_3	8745.07744662676	NA	5	NA	TRUE	NA	NA	NA	B	coding	899	2700	462	3161	20.0	-53	True	AATAAA	-12
PB.1859.6	chr11	+	3257	21	novel_not_in_catalog	ANO5	novel	6656	24	NA	NA	-122	1852	any annotated donor/acceptor	FALSE	canonical	1	11785	junction_2	9700.010832339312	NA	2	NA	TRUE	NA	NA	NA	B	coding	898	2697	440	3136	35.0	-31	True	NA	NA
PB.10594.2	chr7	-	4734	17	novel_not_in_catalog	BAZ1B	novel	6102	20	NA	NA	-15	-18	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	174649.19506108345	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	361	4173	45.0	-1	True	AATAAA	-38
PB.1859.4	chr11	+	6475	21	novel_in_catalog	ANO5	novel	6656	24	NA	NA	-141	-262	no_combination_of_known_junctions	FALSE	canonical	1	19323	junction_3	8745.07744662676	NA	4	NA	TRUE	NA	NA	NA	B	coding	899	2700	459	3158	60.0	-50	True	NA	NA
PB.1859.5	chr11	+	4147	21	novel_in_catalog	ANO5	novel	6656	24	NA	NA	-140	-2589	no_combination_of_known_junctions	FALSE	canonical	1	19323	junction_3	8745.07744662676	NA	3	1	TRUE	NA	NA	NA	B	coding	899	2700	458	3157	25.0	-49	True	GATAAA	-44
PB.12281.1	chrX	-	4290	8	novel_not_in_catalog	ZNF75D	novel	1678	4	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	10672	junction_7	19251.064465665902	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	1409	2941	30.0	17	False	AATAAA	-25
PB.12281.2	chrX	-	4132	7	novel_in_catalog	ZNF75D	novel	1678	4	NA	NA	-33	0	no_combination_of_known_junctions	FALSE	canonical	1	9299	junction_6	20922.141552405406	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	1251	2783	30.0	-12	True	AATAAA	-25
PB.12281.3	chrX	-	5611	7	full-splice_match	ZNF75D	ENST00000370766.7	5592	7	-23	4	-23	0	multi-exon	FALSE	canonical	1	32664	junction_3	16364.11793800353	NA	2	NA	TRUE	NA	NA	NA	C	coding	510	1533	2734	4266	35.0	-2	True	AATAAA	-21
PB.2433.1	chr12	-	1484	2	incomplete-splice_match	SPSB2	ENST00000524270.5	1236	3	-3	3	-3	-3	intron_retention	FALSE	canonical	1	140174	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	263	792	439	1230	15.0	-37	False	AGTAAA	-24
PB.10594.8	chr7	-	2658	8	novel_not_in_catalog	BAZ1B	novel	6102	20	NA	NA	36	-14588	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	188662.0659968614	NA	1	NA	TRUE	NA	NA	NA	C	coding	803	2409	250	2658	75.0	3	True	AAGAAA	-9
PB.5308.5	chr17	+	2325	9	full-splice_match	RPTOR	ENST00000570891.5	2286	9	-44	5	2	-5	multi-exon	FALSE	canonical	1	125882	junction_7	17610.183193521156	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	798	1937	25.0	-13	True	ATTAAA	-15
PB.5308.4	chr17	+	3182	6	full-splice_match	RPTOR	ENST00000649732.1	2499	6	-43	-640	0	640	multi-exon	FALSE	canonical	1	134276	junction_3	15766.180141048751	NA	2	NA	TRUE	NA	NA	NA	C	coding	277	834	800	1633	100.0	-15	True	NA	NA
PB.5308.3	chr17	+	5997	34	full-splice_match	RPTOR	ENST00000306801.7	6408	34	-437	848	0	-848	multi-exon	FALSE	canonical	1	109610	junction_23	36364.01741770044	NA	1	NA	TRUE	NA	NA	NA	C	coding	1335	4008	800	4807	25.0	-15	True	NA	NA
PB.5308.2	chr17	+	6730	34	full-splice_match	RPTOR	ENST00000306801.7	6408	34	-438	116	-1	-116	multi-exon	FALSE	canonical	1	109610	junction_23	36364.01741770044	NA	2	NA	TRUE	NA	NA	NA	C	coding	1335	4008	801	4808	25.0	-16	True	NA	NA
PB.5308.1	chr17	+	6859	34	full-splice_match	RPTOR	ENST00000306801.7	6408	34	-450	-1	-1	1	multi-exon	TRUE	canonical	1	109610	junction_23	36364.01741770044	NA	2	NA	TRUE	NA	NA	NA	C	coding	1335	4008	813	4820	0.0	-28	True	AGTAAA	-15
PB.7367.4	chr20	+	2652	3	full-splice_match	FAM210B	ENST00000371384.3	3046	3	57	337	57	-337	multi-exon	FALSE	canonical	1	168135	junction_1	33988.0	NA	19	NA	TRUE	NA	NA	NA	C	coding	192	579	35	613	80.0	-2	True	NA	NA
PB.7367.5	chr20	+	2785	3	full-splice_match	FAM210B	ENST00000371384.3	3046	3	251	10	57	-10	multi-exon	FALSE	canonical	1	168135	junction_1	33988.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	189	419	45.0	192	False	AATAAA	-12
PB.8352.1	chr3	+	1838	7	full-splice_match	SEC22A	ENST00000492595.5	972	7	-17	-849	12	662	multi-exon	FALSE	canonical	1	86962	junction_1	37167.96157833906	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	66	989	60.0	-17	True	NA	NA
PB.7367.1	chr20	+	1501	3	full-splice_match	FAM210B	ENST00000371384.3	3046	3	36	1509	36	-1509	multi-exon	FALSE	canonical	1	168135	junction_1	33988.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	56	634	60.0	-23	True	NA	NA
PB.7367.2	chr20	+	1815	3	full-splice_match	FAM210B	ENST00000371384.3	3046	3	44	1187	44	-1187	multi-exon	FALSE	canonical	1	168135	junction_1	33988.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	48	626	55.0	-15	True	NA	NA
PB.7367.3	chr20	+	2529	4	novel_not_in_catalog	FAM210B	novel	3046	3	NA	NA	47	-335	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	99240.73935077715	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	45	623	90.0	-12	True	NA	NA
PB.982.5	chr1	-	2192	14	novel_in_catalog	NCF2	novel	2168	13	NA	NA	86	-2	no_combination_of_known_junctions	FALSE	canonical	1	8776	junction_10	182738.25207087095	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	167	1639	15.0	1	True	AATAAA	-19
PB.3656.21	chr14	+	3198	22	full-splice_match	PAPOLA	ENST00000216277.12	4519	22	33	1288	5	395	multi-exon	FALSE	canonical	1	516762	junction_12	274573.26895494247	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	188	2425	85.0	16	True	NA	NA
PB.4404.7	chr16	-	2249	13	novel_not_in_catalog	SHCBP1	novel	3461	13	NA	NA	-22	383	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	72127.37394167503	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	32	2050	55.0	-23	True	CATAAA	-38
PB.4404.6	chr16	-	2521	13	novel_not_in_catalog	SHCBP1	novel	3461	13	NA	NA	-10	667	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	72127.37394167503	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	20	2038	35.0	-11	True	AATAAA	-17
PB.4404.5	chr16	-	2854	13	novel_not_in_catalog	SHCBP1	novel	3461	13	NA	NA	-14	-363	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	72127.37394167503	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	24	2042	50.0	-15	True	NA	NA
PB.4404.4	chr16	-	3012	13	novel_not_in_catalog	SHCBP1	novel	3461	13	NA	NA	-16	-207	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	72127.37394167503	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	26	2044	75.0	-17	True	NA	NA
PB.4404.3	chr16	-	2972	12	novel_in_catalog	SHCBP1	novel	3461	13	NA	NA	-14	-11	combination_of_known_junctions	FALSE	canonical	1	5727	junction_7	73304.2832808719	NA	1	NA	TRUE	NA	NA	NA	B	coding	594	1785	24	1808	55.0	-15	True	ATTAAA	-13
PB.4404.2	chr16	-	3202	13	novel_not_in_catalog	SHCBP1	novel	3461	13	NA	NA	-10	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	72127.37394167503	NA	1	NA	TRUE	NA	NA	NA	B	coding	672	2019	20	2038	55.0	-11	True	ATTAAA	-13
PB.4404.1	chr16	-	3732	14	novel_not_in_catalog	SHCBP1	novel	3461	13	NA	NA	-10	1887	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	88442.12047448698	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	20	2038	25.0	-11	True	ATTAAA	-27
PB.11741.4	chr9	+	2533	8	novel_in_catalog	RGS3	novel	4591	26	NA	NA	173	1	intron_retention	FALSE	canonical	1	498	junction_2	147973.22031064285	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	197	1756	5.0	22	True	AATAAA	-19
PB.7629.3	chr22	+	1041	5	full-splice_match	SNAP29	ENST00000215730.11	4287	5	2	3244	2	155	multi-exon	FALSE	canonical	1	445659	junction_1	62987.82649250568	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	127	903	30.0	-528	False	AATAGA	-15
PB.6226.11	chr19	+	2131	12	full-splice_match	U2AF2	ENST00000450554.6	3022	12	891	0	-28	0	multi-exon	FALSE	canonical	1	1128571	junction_1	471604.0294184333	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	69	1484	15.0	-2	True	ATTAAA	-22
PB.3656.23	chr14	+	2149	19	novel_not_in_catalog	PAPOLA	novel	547	5	NA	NA	-3	427	any annotated donor/acceptor	FALSE	canonical	1	65267	junction_17	354356.796477979	NA	2	NA	TRUE	NA	NA	NA	C	coding	655	1965	185	2149	55.0	19	True	NA	NA
PB.9065.2	chr4	-	2882	8	novel_not_in_catalog	HPF1	novel	1230	8	NA	NA	-9	2	any annotated donor/acceptor	FALSE	canonical	1	1020	junction_7	139669.417237085	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	2123	2779	20.0	30	True	AATAAA	-13
PB.8804.2	chr4	+	1512	9	full-splice_match	STAP1	ENST00000265404.6	1511	9	-1	0	-1	0	multi-exon	FALSE	canonical	1	72746	junction_2	24483.872398159874	NA	1	1	TRUE	NA	NA	NA	C	coding	295	888	84	971	5.0	0	True	AATAAA	-19
PB.8804.1	chr4	+	1974	9	full-splice_match	STAP1	ENST00000265404.6	1511	9	-25	-438	-25	-1	multi-exon	FALSE	canonical	1	72746	junction_2	24483.872398159874	NA	2	NA	TRUE	NA	NA	NA	C	coding	294	885	111	995	20.0	-60	False	NA	NA
PB.9379.10	chr5	+	3294	20	novel_not_in_catalog	FER	novel	12119	20	NA	NA	2	112	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	30051.8492855136	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	90	2558	85.0	14	True	NA	NA
PB.3656.24	chr14	+	4390	23	novel_not_in_catalog	PAPOLA	novel	547	5	NA	NA	0	-28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	329825.1307842711	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	870	2357	85.0	22	True	NA	NA
PB.7629.1	chr22	+	3833	5	full-splice_match	SNAP29	ENST00000215730.11	4287	5	-6	460	-6	-460	multi-exon	FALSE	canonical	1	445659	junction_1	62987.82649250568	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	135	911	100.0	0	True	NA	NA
PB.8566.1	chr3	+	1696	6	full-splice_match	POLR2H	ENST00000456318.5	1802	6	47	59	-24	2	multi-exon	FALSE	canonical	1	46678	junction_1	497898.3259353259	NA	1	NA	TRUE	NA	NA	NA	A	coding	150	453	1003	1455	10.0	55	True	ATTAAA	-13
PB.3936.8	chr15	+	957	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	64	3909	-19	159	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	65	715	20.0	-472	False	AATAAA	-19
PB.7377.1	chr20	-	3474	19	novel_in_catalog	PPP4R1L	novel	4680	10	NA	NA	-10	658	combination_of_known_junctions	FALSE	canonical	1	16994	junction_2	14821.37724821653	NA	2	NA	TRUE	NA	NA	NA	A	coding	415	1248	25	1272	25.0	1	True	GATAAA	-18
PB.10495.8	chr7	-	3682	29	full-splice_match	VPS41	ENST00000310301.8	5903	29	38	2183	0	409	multi-exon	FALSE	canonical	1	194369	junction_28	68542.99035061194	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	18	2582	5.0	-1	True	CATAAA	-14
PB.982.3	chr1	-	2272	16	novel_not_in_catalog	NCF2	novel	2168	13	NA	NA	-23	0	any annotated donor/acceptor	TRUE	canonical	1	2936	junction_15	174037.95541450786	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	137	1717	25.0	283	False	AATAAA	-21
PB.7933.14	chr3	+	1793	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	135	1442	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	211767.20851969084	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	85	567	25.0	12	False	ATTAAA	-15
PB.10495.3	chr7	-	2776	29	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	-10	-7	any annotated donor/acceptor	FALSE	canonical	1	5843	junction_1	87464.63857447197	NA	3	NA	TRUE	NA	NA	NA	C	coding	873	2622	28	2649	25.0	-11	True	NA	NA
PB.3936.1	chr15	+	2692	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	0	2238	0	1118	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	129	779	70.0	2	True	NA	NA
PB.3936.2	chr15	+	3875	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	12	1043	6	-1043	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	117	767	35.0	-21	True	ATTAAA	-18
PB.3936.3	chr15	+	4195	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	6	729	0	-729	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	123	773	35.0	-530	False	AATAAA	-17
PB.3936.4	chr15	+	2490	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	12	2428	6	928	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	117	767	30.0	-21	True	AGTAAA	-13
PB.3936.5	chr15	+	2362	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	35	2533	2	823	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	94	744	25.0	2	True	AATAAA	-22
PB.3936.6	chr15	+	4506	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	26	398	-7	-398	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	103	753	30.0	-7	True	NA	NA
PB.3936.7	chr15	+	4867	5	full-splice_match	RAB11A	ENST00000261890.6	4930	5	56	7	23	-7	multi-exon	FALSE	canonical	1	1773133	junction_1	418448.03898751875	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	73	723	40.0	23	True	AATATA	-24
PB.9751.4	chr6	+	1166	8	full-splice_match	NOL7	ENST00000451315.6	1184	8	10	8	10	-8	multi-exon	FALSE	canonical	1	1078515	junction_3	239469.4968818725	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	74	796	45.0	-2	True	ATTAAA	-13
PB.2193.1	chr11	-	2469	14	full-splice_match	NARS2	ENST00000281038.9	2519	14	48	2	48	-2	multi-exon	FALSE	canonical	1	157700	junction_13	44937.20736353268	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	329	1762	50.0	-22	True	AATAAA	-26
PB.2193.2	chr11	-	2468	13	novel_in_catalog	NARS2	novel	2519	14	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	26198	junction_1	70636.60563935671	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	355	1761	50.0	-48	True	AATAAA	-26
PB.2193.3	chr11	-	2366	13	novel_in_catalog	NARS2	novel	2519	14	NA	NA	64	-8	no_combination_of_known_junctions	FALSE	canonical	1	4245	junction_9	79740.26020718594	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	313	1665	50.0	-6	True	AATAAA	-20
PB.2193.4	chr11	-	2355	13	novel_in_catalog	NARS2	novel	2519	14	NA	NA	23	-8	combination_of_known_junctions	FALSE	canonical	1	12055	junction_7	78714.29034326013	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	354	1049	50.0	-47	True	AATAAA	-20
PB.2193.5	chr11	-	2049	14	novel_in_catalog	NARS2	novel	2519	14	NA	NA	-9	-8	combination_of_known_junctions	FALSE	canonical	1	8768	junction_13	73991.34767904249	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	596	1348	50.0	-89	False	AATAAA	-20
PB.2193.6	chr11	-	2162	14	full-splice_match	NARS2	ENST00000281038.9	2519	14	54	303	54	-41	multi-exon	FALSE	canonical	1	157700	junction_13	44937.20736353268	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	323	1756	15.0	-16	True	AATAAA	-18
PB.2193.7	chr11	-	1793	14	novel_in_catalog	NARS2	novel	2519	14	NA	NA	7	-10	combination_of_known_junctions	FALSE	canonical	1	8768	junction_13	73991.34767904249	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	570	1322	50.0	-63	True	ATTAAA	-9
PB.2193.8	chr11	-	2167	13	novel_in_catalog	NARS2	novel	2519	14	NA	NA	21	-42	combination_of_known_junctions	FALSE	canonical	1	26198	junction_1	70636.60563935671	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	356	1762	15.0	-49	True	AATAAA	-17
PB.7933.11	chr3	+	2492	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	4	-182	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	211767.20851969084	NA	13	1	TRUE	NA	NA	NA	C	coding	213	642	57	698	60.0	1	True	NA	NA
PB.227.7	chr1	+	2417	10	full-splice_match	RCC1	ENST00000373832.5	2424	10	107	-100	-14	100	multi-exon	FALSE	canonical	1	302034	junction_1	232431.94236306392	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	1	1341	30.0	-12	True	AATAAA	-13
PB.8693.6	chr4	-	2519	17	full-splice_match	AFAP1	ENST00000358461.6	7516	17	173	4824	173	28	multi-exon	FALSE	canonical	1	101100	junction_16	35666.424432631225	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	101	2293	70.0	-1	True	AAAAAG	-29
PB.227.1	chr1	+	2545	13	novel_in_catalog	RCC1	novel	2715	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	117546	junction_3	435671.5324638378	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	304	1569	30.0	-1	True	AATAAA	-14
PB.227.3	chr1	+	2546	10	full-splice_match	RCC1	ENST00000373832.5	2424	10	90	-212	-31	-1	multi-exon	FALSE	canonical	1	302034	junction_1	232431.94236306392	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	18	1358	15.0	-29	True	NA	NA
PB.7933.10	chr3	+	1892	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	3	1444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	211767.20851969084	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	58	699	25.0	0	True	ATTAAA	-17
PB.8362.12	chr3	-	3803	9	full-splice_match	ZNF148	ENST00000484491.5	2952	9	-49	-802	15	785	multi-exon	FALSE	canonical	1	23523	junction_6	69434.16795200689	NA	2	NA	TRUE	NA	NA	NA	C	coding	794	2385	352	2736	30.0	12	False	AATAAA	-27
PB.8362.13	chr3	-	3575	9	novel_not_in_catalog	ZNF148	novel	9651	9	NA	NA	-34	329	intron_retention	FALSE	canonical	1	3915	junction_8	72185.94419448983	NA	2	1	TRUE	NA	NA	NA	C	coding	794	2385	580	2964	45.0	NA	False	AATAAA	-14
PB.8362.11	chr3	-	3960	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	-22	5713	-22	785	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	5	NA	TRUE	NA	NA	NA	C	coding	794	2385	509	2893	30.0	-66	False	AATAAA	-27
PB.8362.16	chr3	-	3281	10	novel_not_in_catalog	ZNF148	novel	9651	9	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_2	97476.11834941487	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	626	3016	80.0	-66	False	NA	NA
PB.7933.13	chr3	+	1863	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	118	1444	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	211767.20851969084	NA	3	1	TRUE	NA	NA	NA	C	coding	160	483	102	584	25.0	-5	True	ATTAAA	-17
PB.8362.14	chr3	-	3389	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	65	6197	-11	301	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	422	2806	70.0	21	False	NA	NA
PB.8362.15	chr3	-	3052	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	84	6515	-3	0	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	403	2787	80.0	40	False	NA	NA
PB.8362.18	chr3	-	3206	9	novel_not_in_catalog	ZNF148	novel	9651	9	NA	NA	-11	0	intron_retention	FALSE	canonical	1	3915	junction_8	72185.94419448983	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	557	2941	80.0	NA	False	NA	NA
PB.7933.12	chr3	+	2383	3	full-splice_match	VHL	ENST00000477538.1	958	3	-754	-671	4	671	multi-exon	FALSE	canonical	1	71848	junction_1	220828.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	57	503	15.0	1	True	NA	NA
PB.8328.6	chr3	-	1869	1	incomplete-splice_match	FSTL1	ENST00000295633.7	5943	11	55105	1987	3941	1943	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	7202	False	AATAAA	-13
PB.8328.2	chr3	-	3891	10	incomplete-splice_match	FSTL1	ENST00000295633.7	5943	11	215	1987	-45	1943	intron_retention	FALSE	canonical	1	1126887	junction_9	537838.0915023488	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	293	1219	10.0	187	False	AATAAA	-13
PB.11880.1	chr9	-	1040	9	full-splice_match	SURF1	ENST00000371974.7	1093	9	-4	57	-4	-7	multi-exon	FALSE	canonical	1	191455	junction_7	240839.71913776884	NA	0	NA	TRUE	NA	NA	NA	A	coding	300	903	37	939	30.0	-22	True	TATAAA	-18
PB.8328.1	chr3	-	3700	11	full-splice_match	FSTL1	ENST00000295633.7	5943	11	258	1985	-2	1945	multi-exon	FALSE	canonical	1	753824	junction_10	701820.5135136832	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	100	1026	5.0	-5	True	AATAAA	-15
PB.11755.1	chr9	+	2762	2	full-splice_match	B3GNT10	ENST00000437707.1	430	2	-21	-2311	-21	1025	multi-exon	FALSE	canonical	1	38749	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	244	735	763	1497	35.0	61	False	NA	NA
PB.237.1	chr1	+	1835	4	novel_in_catalog	MATN1-AS1	novel	3925	4	NA	NA	-34	3	combination_of_known_junctions	FALSE	canonical	1	11809	junction_1	4011.802947415151	NA	0	NA	TRUE	NA	NA	NA	A	coding	5	18	449	466	25.0	0	True	ATTAAA	-4
PB.2183.1	chr11	+	1612	1	novel_in_catalog	AQP11	novel	1202	4	NA	NA	3	-18760	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	225	678	356	1033	55.0	0	True	ATTAAA	-11
PB.1377.9	chr10	-	2781	5	incomplete-splice_match	ZNF33B	ENST00000486187.5	1941	6	-7	10638	-7	-3125	3prime_fragment	FALSE	canonical	1	20579	junction_3	53243.69074535968	NA	5	NA	TRUE	NA	NA	NA	C	coding	666	2001	400	2400	30.0	9	True	AATAAA	-20
PB.1377.8	chr10	-	2973	6	novel_in_catalog	ZNF33B	novel	567	2	NA	NA	-33	-3119	combination_of_known_junctions	FALSE	canonical	1	56916	junction_1	43731.122403158144	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	586	2586	35.0	7	True	AATAAA	-26
PB.1377.1	chr10	-	6076	6	novel_in_catalog	ZNF33B	novel	567	2	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	1	56916	junction_1	43731.122403158144	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	574	2574	30.0	19	False	AATAAA	-18
PB.1377.2	chr10	-	5999	5	full-splice_match	ZNF33B	ENST00000359467.7	5958	5	-45	4	-21	-4	multi-exon	FALSE	canonical	1	66062	junction_1	37753.16612219431	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	161	2497	30.0	19	False	AATAAA	-18
PB.9418.3	chr5	+	2462	14	full-splice_match	GRAMD2B	ENST00000285689.7	3175	14	262	451	-1	-241	multi-exon	FALSE	canonical	1	152989	junction_3	26819.927249944354	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	200	1498	10.0	-1	True	AATAAA	-31
PB.1377.4	chr10	-	4193	6	novel_not_in_catalog	ZNF33B	novel	567	2	NA	NA	0	-1856	any annotated donor/acceptor	FALSE	canonical	1	11027	junction_3	53296.78599840707	NA	1	1	TRUE	NA	NA	NA	C	coding	666	2001	543	2543	70.0	16	True	NA	NA
PB.1377.7	chr10	-	2956	5	full-splice_match	ZNF33B	ENST00000359467.7	5958	5	-11	3013	-2	-3013	multi-exon	FALSE	canonical	1	66062	junction_1	37753.16612219431	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	127	2463	45.0	14	True	NA	NA
PB.1377.6	chr10	-	3090	6	novel_in_catalog	ZNF33B	novel	567	2	NA	NA	-21	-2990	combination_of_known_junctions	FALSE	canonical	1	56916	junction_1	43731.122403158144	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	574	2574	20.0	19	False	NA	NA
PB.7063.3	chr2	+	3450	17	novel_in_catalog	PSMD1	novel	3230	24	NA	NA	1	850	combination_of_known_junctions	FALSE	canonical	1	855	junction_16	255192.9009472234	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	159	2060	25.0	-7	True	ATTAAA	-19
PB.7063.2	chr2	+	3579	17	novel_not_in_catalog	PSMD1	novel	3230	24	NA	NA	0	-3892	any annotated donor/acceptor	FALSE	canonical	1	147	junction_16	255330.00946492635	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	160	2049	25.0	-8	True	AATAAA	-19
PB.7063.1	chr2	+	3263	25	full-splice_match	PSMD1	ENST00000308696.10	3326	25	-3	66	-3	1	multi-exon	FALSE	canonical	1	557003	junction_1	206785.58805679143	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	166	3027	10.0	-14	True	AATAAA	-26
PB.7063.7	chr2	+	2748	23	novel_not_in_catalog	PSMD1	novel	3230	24	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	6745	junction_19	322887.0210539325	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	137	2269	80.0	15	True	NA	NA
PB.7063.6	chr2	+	2630	22	incomplete-splice_match	PSMD1	ENST00000308696.10	3326	25	49	7592	19	0	3prime_fragment	FALSE	canonical	1	557003	junction_1	199331.0112192116	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2517	114	2630	80.0	38	True	NA	NA
PB.7063.5	chr2	+	2569	21	incomplete-splice_match	PSMD1	ENST00000409643.5	2901	23	-13	5477	6	0	3prime_fragment	FALSE	canonical	1	4175	junction_20	264574.78202698665	NA	1	NA	TRUE	NA	NA	NA	C	coding	808	2424	146	2569	80.0	6	True	NA	NA
PB.7063.4	chr2	+	2550	21	novel_in_catalog	PSMD1	novel	3230	24	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	5835	junction_16	280503.74991078104	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	149	2050	80.0	3	True	NA	NA
PB.8470.10	chr3	+	3282	6	full-splice_match	SELENOT	ENST00000485923.1	1078	6	324	-2528	324	-2	multi-exon	FALSE	canonical	1	11851	junction_1	203835.95549990685	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	65	478	35.0	274	False	AATAAA	-13
PB.8470.11	chr3	+	2608	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	35	826	-5	-826	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	215	628	10.0	2	True	TATAAA	-20
PB.7063.9	chr2	+	2587	21	incomplete-splice_match	PSMD1	ENST00000308696.10	3326	25	34	9122	4	-5	3prime_fragment	FALSE	canonical	1	557003	junction_1	190031.63760591944	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2457	129	2585	80.0	23	True	NA	NA
PB.7063.8	chr2	+	3055	17	novel_not_in_catalog	PSMD1	novel	3230	24	NA	NA	2	13101	any annotated donor/acceptor	FALSE	canonical	1	61	junction_16	255346.6667094462	NA	1	NA	TRUE	NA	NA	NA	C	coding	637	1914	131	2044	10.0	21	True	NA	NA
PB.11844.4	chr9	-	2891	5	novel_in_catalog	ASB6	novel	4535	5	NA	NA	-13	2	intron_retention	FALSE	canonical	1	160058	junction_4	52569.47305411669	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	1425	1991	35.0	-44	False	ATTAAA	-22
PB.10401.4	chr7	+	3351	12	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-17	5	no_combination_of_known_junctions	FALSE	canonical	1	16270	junction_1	99413.28370631728	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	588	3215	20.0	-1	True	AATAAA	-19
PB.10401.5	chr7	+	3227	12	full-splice_match	MIOS	ENST00000405785.5	3095	12	117	-249	4	-24	multi-exon	FALSE	canonical	1	21293	junction_1	98194.29709442279	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	220	2847	55.0	4	True	AATAAA	-15
PB.7122.1	chr20	+	2116	1	full-splice_match	ZCCHC3	ENST00000500893.3	3354	1	1234	4	1234	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	60	183	415	597	30.0	589	False	AATAAA	-21
PB.10401.7	chr7	+	3413	13	full-splice_match	MIOS	ENST00000340080.8	3453	13	16	24	13	-24	multi-exon	FALSE	canonical	1	19575	junction_1	108292.70715605692	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	406	3033	55.0	4	True	AATAAA	-15
PB.10401.1	chr7	+	3552	12	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-14	5	intron_retention	FALSE	canonical	1	90691	junction_1	82103.16154621757	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	789	3416	20.0	2	True	AATAAA	-19
PB.10401.2	chr7	+	3075	13	full-splice_match	MIOS	ENST00000340080.8	3453	13	110	268	-6	5	multi-exon	FALSE	canonical	1	19575	junction_1	108292.70715605692	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	312	2939	20.0	-6	True	AATAAA	-19
PB.10401.3	chr7	+	3481	13	novel_in_catalog	MIOS	novel	3453	13	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	14058	junction_1	109347.10752118686	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	718	3345	20.0	0	True	AATAAA	-19
PB.11844.2	chr9	-	5163	5	novel_in_catalog	ASB6	novel	4535	5	NA	NA	-1	2	intron_retention	FALSE	canonical	1	160058	junction_4	52569.47305411669	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	1409	1975	35.0	-28	True	AATAAA	-19
PB.8643.7	chr4	+	3748	4	novel_not_in_catalog	ZNF141	novel	536	2	NA	NA	-3	2701	any annotated donor/acceptor	FALSE	canonical	1	6515	junction_3	28660.459793163747	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-3	True	NA	NA
PB.10401.8	chr7	+	3819	12	novel_in_catalog	MIOS	novel	3453	13	NA	NA	28	-24	intron_retention	FALSE	canonical	1	90691	junction_1	82103.16154621757	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	812	3439	55.0	-21	True	AATAAA	-15
PB.10401.9	chr7	+	3594	12	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-16	-24	no_combination_of_known_junctions	FALSE	canonical	1	16270	junction_1	99413.28370631728	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	587	3214	55.0	0	True	AATAAA	-15
PB.11844.3	chr9	-	4619	6	full-splice_match	ASB6	ENST00000277458.4	2330	6	-1	-2288	-1	0	multi-exon	FALSE	canonical	1	160058	junction_5	47785.94426146668	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	168	1433	30.0	-28	True	AATAAA	-17
PB.7110.3	chr2	+	3388	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	1	8022	junction_1	939133.3128111893	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	336	1301	25.0	-2167	False	AATAAA	-20
PB.6565.11	chr2	-	2600	2	full-splice_match	RTKN	ENST00000460968.1	842	2	-367	-1391	19	674	multi-exon	FALSE	canonical	1	68199	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	440	796	85.0	-12	True	NA	NA
PB.6598.7	chr2	+	2091	13	full-splice_match	USP39	ENST00000323701.10	2177	13	86	0	-18	0	multi-exon	FALSE	canonical	1	397918	junction_1	162273.07168702714	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	732	1622	25.0	-7380	False	ATTAAA	-16
PB.12033.21	chrX	+	3803	10	incomplete-splice_match	DDX3X	ENST00000642687.1	4508	11	1094	-4	-255	0	5prime_fragment	FALSE	canonical	1	1141925	junction_8	365907.63578575535	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	84	1313	10.0	-6183	False	AATAAA	-19
PB.6598.5	chr2	+	2289	14	novel_in_catalog	USP39	novel	648	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	27829	junction_11	297983.3369173359	NA	2	1	TRUE	NA	NA	NA	C	coding	274	825	839	1663	15.0	-28	True	ATTAAA	-21
PB.6565.10	chr2	-	2249	11	novel_in_catalog	RTKN	novel	2646	13	NA	NA	19	-1	intron_retention	FALSE	canonical	1	63795	junction_10	87840.31049558056	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	688	1890	15.0	-12	True	ATTAAA	-14
PB.8397.40	chr3	+	3274	28	full-splice_match	ATP2C1	ENST00000508532.5	4969	28	172	1523	-15	285	multi-exon	FALSE	canonical	1	32044	junction_1	242080.2703752739	NA	3	NA	TRUE	NA	NA	NA	C	coding	919	2760	238	2997	35.0	-42	True	ATTAAA	-14
PB.6598.2	chr2	+	2176	13	novel_in_catalog	USP39	novel	648	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	4903	junction_1	276113.7559350916	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	817	1707	25.0	-2	True	ATTAAA	-16
PB.6598.1	chr2	+	2102	13	novel_in_catalog	USP39	novel	648	5	NA	NA	28	0	intron_retention	FALSE	canonical	1	34829	junction_1	225928.60394123037	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	738	1628	15.0	23	True	ATTAAA	-21
PB.7110.5	chr2	+	3596	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	772	junction_1	1029733.7260819839	NA	7	1	TRUE	NA	NA	NA	C	coding	361	1086	425	1510	25.0	-7	True	AATAAA	-19
PB.797.5	chr1	-	2388	12	full-splice_match	GBA	ENST00000327247.9	2387	12	-2	1	-2	0	multi-exon	FALSE	canonical	1	53031	junction_11	211657.09265946617	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	236	1846	20.0	-14	True	NA	NA
PB.6923.10	chr2	-	2373	12	full-splice_match	HSPD1	ENST00000345042.6	2299	12	-74	0	-74	0	multi-exon	FALSE	canonical	1	30477	junction_11	814027.5029009607	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	192	1913	30.0	-483	False	AATAAA	-16
PB.6923.13	chr2	-	1356	6	novel_not_in_catalog	HSPD1	novel	2455	12	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	14036	junction_5	1072498.6418403334	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	121	897	30.0	9295	False	AATAAA	-15
PB.797.6	chr1	-	2172	10	full-splice_match	GBA	ENST00000427500.7	2063	10	-3	-106	-3	0	multi-exon	FALSE	canonical	1	4711	junction_7	226448.26446385356	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	167	1630	20.0	-1	True	NA	NA
PB.2898.2	chr12	+	1176	7	full-splice_match	FAM216A	ENST00000377673.9	1582	7	425	-19	8	19	multi-exon	FALSE	canonical	1	186245	junction_1	103407.88461462803	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	139	909	40.0	8	True	ATTAAA	-37
PB.6923.14	chr2	-	2823	11	novel_in_catalog	HSPD1	novel	2455	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	616249	junction_8	759078.9067130043	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	1210	2364	30.0	-15	False	AATAAA	-15
PB.6923.17	chr2	-	1600	11	incomplete-splice_match	HSPD1	ENST00000388968.7	2455	12	211	1303	-1	90	3prime_fragment	FALSE	canonical	1	616249	junction_8	614617.0138004724	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	58	1599	50.0	3	True	NA	NA
PB.2898.1	chr12	+	2189	6	novel_in_catalog	FAM216A	novel	1582	7	NA	NA	117	-2	intron_retention	FALSE	canonical	1	186245	junction_1	104775.56608179217	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	30	611	30.0	0	True	ATTAAA	-16
PB.10475.1	chr7	-	3448	4	full-splice_match	KBTBD2	ENST00000304056.8	3745	4	301	-4	301	4	multi-exon	FALSE	canonical	1	124035	junction_3	94878.03327547543	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	400	2271	10.0	-4	True	AATAAA	-19
PB.8643.4	chr4	+	3807	4	full-splice_match	ZNF141	ENST00000240499.7	2970	4	-34	-803	-13	803	multi-exon	FALSE	canonical	1	39455	junction_2	16506.45654147357	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	184	1608	45.0	-13	True	AGTAAA	-16
PB.11262.1	chr8	-	4410	11	full-splice_match	NIPAL2	ENST00000430223.6	4496	11	96	-10	96	10	multi-exon	FALSE	canonical	1	72016	junction_10	26794.802770126895	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	104	1255	20.0	-34	True	AATAAA	-23
PB.11262.2	chr8	-	4304	10	novel_in_catalog	NIPAL2	novel	4496	11	NA	NA	101	4	no_combination_of_known_junctions	FALSE	canonical	1	4914	junction_1	44430.5264999384	NA	3	1	TRUE	NA	NA	NA	C	coding	327	984	99	1082	25.0	-29	True	AATAAA	-17
PB.11262.3	chr8	-	4609	12	novel_in_catalog	NIPAL2	novel	4496	11	NA	NA	113	2	combination_of_known_junctions	FALSE	canonical	1	5372	junction_7	49681.277599321314	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	87	698	30.0	-17	True	AATAAA	-15
PB.10212.2	chr6	+	2201	2	full-splice_match	AKAP7	ENST00000342266.4	2461	2	260	0	-11	0	multi-exon	FALSE	canonical	1	21731	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	10	True	AATAAA	-17
PB.7110.9	chr2	+	3476	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	8022	junction_1	1113334.0893804496	NA	1	1	TRUE	NA	NA	NA	C	coding	321	966	400	1365	25.0	3	True	AATAAA	-20
PB.2923.1	chr12	+	1857	4	full-splice_match	RITA1	ENST00000548278.1	2053	4	195	1	179	-1	multi-exon	FALSE	canonical	1	270751	junction_3	35110.65694185867	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	498	1307	20.0	0	True	NA	NA
PB.2923.2	chr12	+	1647	4	full-splice_match	RITA1	ENST00000548278.1	2053	4	191	215	175	-208	multi-exon	FALSE	canonical	1	270751	junction_3	35110.65694185867	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	502	1311	15.0	-4	True	AATAAA	-14
PB.5255.1	chr17	+	1359	4	full-splice_match	UNK	ENST00000586527.1	1312	4	-49	2	35	-2	multi-exon	FALSE	canonical	1	98560	junction_1	26130.51812642749	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-65	True	ATTAAA	-25
PB.5255.2	chr17	+	2894	5	novel_not_in_catalog	UNK	novel	3925	16	NA	NA	-35	2974	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	60053.30376580043	NA	6	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-64	True	AATAAA	-18
PB.5255.3	chr17	+	2011	2	novel_not_in_catalog	UNK	novel	3925	16	NA	NA	3	-4342	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	139	420	37	456	85.0	-26	True	NA	NA
PB.7073.4	chr2	-	2490	1	full-splice_match	TIGD1	ENST00000408957.5	2623	1	34	99	34	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	591	1776	677	2452	25.0	-2	True	NA	NA
PB.7073.5	chr2	-	2075	2	antisense	novelGene_EIF4E2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1227	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	591	1776	263	2038	25.0	-1	True	NA	NA
PB.8266.7	chr3	-	4130	12	novel_not_in_catalog	TOMM70	novel	4409	12	NA	NA	288	-34	any annotated donor/acceptor	FALSE	canonical	1	3554	junction_3	213572.44920840336	NA	4	1	TRUE	NA	NA	NA	C	coding	507	1524	162	1685	20.0	-29	True	AATAAA	-11
PB.7073.1	chr2	-	3283	2	antisense	novelGene_EIF4E2_AS_novelGene_CHRNG_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	B	coding	591	1776	699	2474	90.0	-24	True	NA	NA
PB.8266.3	chr3	-	3643	12	full-splice_match	TOMM70	ENST00000284320.5	4409	12	732	34	732	-34	multi-exon	FALSE	canonical	1	452498	junction_11	108992.48400298296	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	39	1544	20.0	741	False	AATAAA	-11
PB.7073.3	chr2	-	3319	2	antisense	novelGene_EIF4E2_AS_novelGene_CHRNG_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	71	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	591	1776	675	2450	75.0	0	True	NA	NA
PB.10415.3	chr7	+	5418	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	0	-457	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	2	NA	TRUE	NA	NA	NA	C	coding	848	2547	644	3190	45.0	0	True	ATTAAA	-7
PB.10415.2	chr7	+	4183	1	novel_in_catalog	AHR	novel	6958	15	NA	NA	-13	-31159	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	100	303	3	305	85.0	-1088	False	AATAAA	-39
PB.10415.1	chr7	+	5388	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	-31	-382	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	117711.77882459166	NA	3	NA	TRUE	NA	NA	NA	C	coding	848	2547	675	3221	30.0	-1106	False	AATAAA	-14
PB.10199.1	chr6	+	2627	5	full-splice_match	HEY2	ENST00000368364.3	2678	5	53	-2	53	2	multi-exon	FALSE	canonical	1	37736	junction_1	8551.851393119505	NA	1	NA	TRUE	NA	NA	NA	A	coding	324	975	184	1158	15.0	0	True	ATTAAA	-21
PB.10415.7	chr7	+	3795	10	incomplete-splice_match	AHR	ENST00000242057.8	6276	11	0	5173	0	1450	3prime_fragment	FALSE	canonical	1	202168	junction_1	73292.81940390095	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	644	3067	75.0	0	True	TTTAAA	-18
PB.10415.6	chr7	+	3133	2	incomplete-splice_match	AHR	ENST00000242057.8	6276	11	-1	33791	-1	-21591	3prime_fragment	FALSE	canonical	1	202168	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	645	953	80.0	-1	True	NA	NA
PB.10415.5	chr7	+	6080	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	-1	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	2	NA	TRUE	NA	NA	NA	C	coding	848	2547	645	3191	70.0	-1	True	NA	NA
PB.10415.4	chr7	+	3691	11	full-splice_match	AHR	ENST00000242057.8	6276	11	-1	2586	-1	-2586	multi-exon	FALSE	canonical	1	202168	junction_1	70868.73382112876	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	645	3191	40.0	-1	True	AATAAA	-20
PB.1214.1	chr1	-	6058	24	full-splice_match	ARID4B	ENST00000264183.8	4995	24	-75	-988	8	-1	multi-exon	FALSE	canonical	1	210820	junction_7	45325.85594665352	NA	0	NA	TRUE	NA	NA	NA	C	coding	1312	3939	491	4429	30.0	583	False	AATAAA	-24
PB.10415.9	chr7	+	5870	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	0	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	1	NA	TRUE	NA	NA	NA	C	coding	848	2547	644	3190	45.0	0	True	NA	NA
PB.10415.8	chr7	+	5932	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	0	-22	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	2	1	TRUE	NA	NA	NA	C	coding	848	2547	644	3190	65.0	0	True	NA	NA
PB.1214.5	chr1	-	3587	20	full-splice_match	ARID4B	ENST00000491632.5	3823	20	-10	246	-10	-6	multi-exon	FALSE	canonical	1	79009	junction_4	62838.01824490783	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3126	460	3585	65.0	-11	True	NA	NA
PB.1214.4	chr1	-	3859	21	incomplete-splice_match	ARID4B	ENST00000264183.8	4995	24	-58	9978	4	-6	3prime_fragment	FALSE	canonical	1	210820	junction_4	45980.84459019321	NA	0	NA	TRUE	NA	NA	NA	C	coding	1128	3384	474	3857	65.0	-25	True	NA	NA
PB.1214.7	chr1	-	2439	19	incomplete-splice_match	ARID4B	ENST00000264183.8	4995	24	-54	26284	8	-14029	3prime_fragment	FALSE	canonical	1	210820	junction_2	46088.28543163412	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1968	470	2437	45.0	-21	True	AATAAA	-39
PB.1214.6	chr1	-	2881	20	incomplete-splice_match	ARID4B	ENST00000264183.8	4995	24	-64	14633	-2	-2378	3prime_fragment	FALSE	canonical	1	210820	junction_3	45141.8469472798	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	480	2879	60.0	594	False	NA	NA
PB.6413.1	chr2	+	2793	9	full-splice_match	GPATCH11	ENST00000409774.5	3906	9	29	1084	29	-1084	multi-exon	FALSE	canonical	1	47208	junction_7	27430.289872693655	NA	1	NA	TRUE	NA	NA	NA	A	coding	285	858	39	896	60.0	-1	True	NA	NA
PB.379.21	chr1	-	3291	11	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	64	-185	no_combination_of_known_junctions	FALSE	canonical	1	7347	junction_6	293238.8028483952	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	1870	2526	25.0	4	True	AATAAA	-17
PB.10475.3	chr7	-	3209	4	novel_in_catalog	KBTBD2	novel	3745	4	NA	NA	268	-2	intron_retention	FALSE	canonical	1	29772	junction_2	104200.30125462956	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	341	2038	20.0	-19	True	AATAAA	-13
PB.3279.16	chr13	+	2062	17	novel_in_catalog	CDC16	novel	2211	19	NA	NA	9	0	intron_retention	FALSE	canonical	1	23697	junction_16	183160.3852566788	NA	2	NA	TRUE	NA	NA	NA	C	coding	511	1536	59	1594	5.0	2	True	AATAAA	-15
PB.3279.17	chr13	+	2820	18	novel_not_in_catalog	CDC16	novel	2211	19	NA	NA	283	0	intron_retention	FALSE	canonical	1	4657	junction_1	176768.8017320323	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	1008	2588	5.0	271	False	AATAAA	-15
PB.3279.14	chr13	+	1994	18	full-splice_match	CDC16	ENST00000628084.2	2058	18	64	0	17	0	multi-exon	FALSE	canonical	1	21375	junction_12	203840.40921183184	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	135	1844	5.0	4	True	AATAAA	-15
PB.3279.15	chr13	+	3160	18	novel_in_catalog	CDC16	novel	2211	19	NA	NA	20	0	intron_retention	FALSE	canonical	1	5436	junction_4	204207.07391622264	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	1919	3010	5.0	7	True	AATAAA	-15
PB.3279.12	chr13	+	2198	17	novel_not_in_catalog	CDC16	novel	2211	19	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_6	246690.7114527391	NA	3	1	TRUE	NA	NA	NA	C	coding	129	390	1577	1966	5.0	-9	True	AATAAA	-15
PB.3279.13	chr13	+	2174	17	novel_in_catalog	CDC16	novel	2211	19	NA	NA	17	0	intron_retention	FALSE	canonical	1	50421	junction_1	172523.05184089486	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	362	1942	5.0	4	True	AATAAA	-15
PB.3279.10	chr13	+	3031	18	novel_in_catalog	CDC16	novel	2211	19	NA	NA	-18	0	intron_retention	FALSE	canonical	1	234806	junction_17	153484.90084384516	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	1790	2881	5.0	-50	False	AATAAA	-15
PB.3279.11	chr13	+	2073	19	full-splice_match	CDC16	ENST00000360383.7	2211	19	138	0	7	0	multi-exon	FALSE	canonical	1	234806	junction_18	149351.7286504153	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	61	1923	5.0	0	True	AATAAA	-15
PB.7794.6	chr22	-	1912	9	novel_in_catalog	RPL3	novel	1289	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	4840	junction_1	9414949.480624389	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	1102	1857	15.0	-1	True	AATAAA	-16
PB.7794.7	chr22	-	2610	7	novel_in_catalog	RPL3	novel	1289	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	4840	junction_1	9457701.491405245	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	1103	1624	10.0	-2	True	AATAAA	-13
PB.7794.4	chr22	-	2911	7	novel_in_catalog	RPL3	novel	1289	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	4840	junction_1	10506955.31629935	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	1102	1455	15.0	-1	True	AATAAA	-16
PB.7794.5	chr22	-	2914	8	novel_in_catalog	RPL3	novel	1289	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	4840	junction_1	9860643.344440758	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	2104	2859	15.0	-1	True	AATAAA	-16
PB.7794.2	chr22	-	1293	10	full-splice_match	RPL3	ENST00000216146.8	1442	10	148	1	0	-1	multi-exon	FALSE	canonical	1	4840	junction_1	9119091.726204671	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	27	1238	15.0	-1	True	AATAAA	-16
PB.9461.2	chr5	+	4457	2	full-splice_match	C5orf24	ENST00000394976.3	5065	2	-34	642	-34	-14	multi-exon	FALSE	canonical	1	247691	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	263	829	80.0	-42	True	NA	NA
PB.3279.18	chr13	+	2740	19	novel_not_in_catalog	CDC16	novel	2211	19	NA	NA	287	0	any annotated donor/acceptor	FALSE	canonical	1	4657	junction_1	277545.68922581064	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	1499	2590	5.0	275	False	AATAAA	-15
PB.7794.1	chr22	-	1473	10	novel_in_catalog	RPL3	novel	1289	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	4840	junction_1	9268990.286937837	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	663	1418	15.0	-1	True	AATAAA	-16
PB.10196.1	chr6	-	2349	1	antisense	novelGene_SMPDL3A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	17	54	433	486	10.0	1105	False	NA	NA
PB.954.8	chr1	-	2742	20	novel_in_catalog	COP1	novel	2131	9	NA	NA	-174	-21	combination_of_known_junctions	FALSE	canonical	1	99678	junction_13	108668.48479741588	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	280	2463	80.0	-14	True	NA	NA
PB.954.9	chr1	-	2737	19	full-splice_match	COP1	ENST00000308769.12	2124	19	-292	-321	-187	0	multi-exon	FALSE	canonical	1	78940	junction_13	108977.46376620067	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	293	2416	25.0	-27	True	AATAAA	-37
PB.7475.8	chr21	-	3221	16	novel_in_catalog	APP	novel	3467	18	NA	NA	0	-247	combination_of_known_junctions	FALSE	canonical	1	155055	junction_3	1777337.3436191492	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	148	2349	30.0	-2	True	AATAAA	-22
PB.7475.9	chr21	-	3106	16	full-splice_match	APP	ENST00000348990.9	3355	16	-2	251	-2	-250	multi-exon	FALSE	canonical	1	609005	junction_10	1569556.7670530712	NA	1	NA	TRUE	NA	NA	NA	C	coding	695	2088	150	2237	25.0	-4	True	AATAAA	-19
PB.954.4	chr1	-	2681	18	novel_in_catalog	COP1	novel	2131	9	NA	NA	-187	0	no_combination_of_known_junctions	FALSE	canonical	1	7932	junction_13	115539.73791074839	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	293	2359	20.0	-27	True	AATAAA	-38
PB.7475.7	chr21	-	3302	18	full-splice_match	APP	ENST00000346798.7	3467	18	-111	276	2	-275	multi-exon	FALSE	canonical	1	1830298	junction_10	1442683.2600734793	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	146	2458	75.0	0	True	NA	NA
PB.7475.4	chr21	-	3524	17	full-splice_match	APP	ENST00000357903.7	3543	17	18	1	-2	0	multi-exon	FALSE	canonical	1	1846989	junction_10	1338998.3086975818	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	150	2405	20.0	-4	True	AATAAA	-18
PB.7475.5	chr21	-	3527	17	full-splice_match	APP	ENST00000358918.7	2366	17	-102	-1059	-2	0	multi-exon	FALSE	canonical	1	155055	junction_3	1810247.5482132616	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	150	2408	20.0	-4	True	AATAAA	-18
PB.7475.3	chr21	-	3582	18	full-splice_match	APP	ENST00000346798.7	3467	18	-116	1	-3	0	multi-exon	FALSE	canonical	1	1830298	junction_10	1442683.2600734793	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	151	2463	20.0	-5	True	AATAAA	-18
PB.954.2	chr1	-	2867	20	novel_not_in_catalog	COP1	novel	2131	9	NA	NA	-187	0	any annotated donor/acceptor	TRUE	canonical	1	567	junction_12	127907.16359357678	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	293	2545	20.0	-27	True	AATAAA	-38
PB.7475.1	chr21	-	3498	16	novel_in_catalog	APP	novel	3467	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	155055	junction_3	1777337.3436191492	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	177	2378	15.0	926	False	AATAAA	-19
PB.8433.5	chr3	+	2666	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-85	-1280	-28	1280	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	254	1189	85.0	-41	True	NA	NA
PB.8433.4	chr3	+	3168	4	full-splice_match	SLC25A36	ENST00000507429.5	3537	4	-85	454	-28	-454	multi-exon	FALSE	canonical	1	268130	junction_2	8233.680478511553	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	254	652	15.0	-41	True	ATTAAA	-15
PB.8433.7	chr3	+	5727	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-82	-4344	-25	33	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	6	NA	TRUE	NA	NA	NA	C	coding	311	936	251	1186	15.0	-38	True	AATAAA	-27
PB.8433.6	chr3	+	4819	9	full-splice_match	SLC25A36	ENST00000648615.1	5809	9	-36	1026	-25	2	multi-exon	FALSE	canonical	1	6908	junction_5	171926.9032077568	NA	3	NA	TRUE	NA	NA	NA	C	coding	188	567	771	1337	30.0	-38	True	ATTAAA	-12
PB.8433.1	chr3	+	3954	3	novel_not_in_catalog	SLC25A36	novel	4638	7	NA	NA	-52	-1616	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	143201.0	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-133	False	NA	NA
PB.841.6	chr1	+	2763	12	novel_in_catalog	IFI16	novel	856	3	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	1	295	junction_8	417405.22494878457	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	327	2516	35.0	0	True	AATAAA	-21
PB.8433.3	chr3	+	4855	4	full-splice_match	SLC25A36	ENST00000507429.5	3537	4	-85	-1233	-28	439	multi-exon	FALSE	canonical	1	268130	junction_2	8233.680478511553	NA	3	NA	TRUE	NA	NA	NA	C	coding	132	399	254	652	75.0	-41	True	NA	NA
PB.8433.2	chr3	+	3595	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-86	-2208	-29	-1075	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	255	1190	30.0	-42	True	TATAAA	-25
PB.531.1	chr1	+	2737	12	full-splice_match	ZNF326	ENST00000340281.8	2729	12	-5	-3	-2	3	multi-exon	TRUE	canonical	1	126504	junction_4	85565.27476650658	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	149	1897	10.0	0	True	AATACA	-21
PB.841.8	chr1	+	1580	7	novel_in_catalog	IFI16	novel	856	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	32640	junction_1	371484.4331125016	NA	4	2	TRUE	NA	NA	NA	C	coding	387	1161	420	1580	55.0	-17	True	NA	NA
PB.8433.9	chr3	+	1194	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-67	174	-10	-5	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	236	1171	75.0	-23	True	NA	NA
PB.8433.8	chr3	+	1462	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	-15	-11	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	241	660	75.0	-28	True	NA	NA
PB.9430.1	chr5	+	2092	5	full-splice_match	LYRM7	ENST00000379380.8	6351	5	146	4113	12	1347	multi-exon	FALSE	canonical	1	126082	junction_2	15695.050605206725	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	66	380	95.0	-28	True	NA	NA
PB.9430.3	chr5	+	2486	5	full-splice_match	LYRM7	ENST00000379380.8	6351	5	158	3707	-21	1753	multi-exon	FALSE	canonical	1	126082	junction_2	15695.050605206725	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	54	368	80.0	-16	True	NA	NA
PB.9430.2	chr5	+	2002	4	full-splice_match	LYRM7	ENST00000507584.1	317	4	-25	-1660	20	1347	multi-exon	FALSE	canonical	1	11741	junction_3	66224.90243774535	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-20	True	NA	NA
PB.9430.5	chr5	+	1916	3	novel_in_catalog	LYRM7	novel	6351	5	NA	NA	-1	1347	no_combination_of_known_junctions	FALSE	canonical	1	1171	junction_1	78418.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	4	True	NA	NA
PB.9430.4	chr5	+	2213	6	novel_not_in_catalog	LYRM7	novel	6351	5	NA	NA	-4	-1212	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	61669.42703609302	NA	2	1	TRUE	NA	NA	NA	C	coding	104	315	37	351	90.0	1	True	NA	NA
PB.7931.10	chr3	+	5217	44	full-splice_match	FANCD2	ENST00000419585.5	5185	44	-32	0	-1	0	multi-exon	FALSE	canonical	1	149	junction_21	80848.96369793336	NA	1	NA	TRUE	NA	NA	NA	C	coding	1451	4356	194	4549	15.0	27	True	AATAAA	-16
PB.9565.1	chr5	+	2519	2	novel_not_in_catalog	SYNPO	novel	7063	3	NA	NA	7743	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	A	coding	102	309	90	398	5.0	-23	True	AATAAA	-15
PB.610.3	chr1	-	1994	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	1	166332	junction_9	230777.18921697803	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	367	1167	30.0	-1	True	AATAAA	-13
PB.8435.37	chr3	+	2967	3	full-splice_match	ZBTB38	ENST00000510338.5	644	3	11	-2334	-10	459	multi-exon	FALSE	canonical	1	92943	junction_1	54202.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2772	196	2967	55.0	4	True	NA	NA
PB.12117.21	chrX	+	2538	4	incomplete-splice_match	MSN	ENST00000360270.6	3944	13	69651	1	69651	-1	5prime_fragment	FALSE	canonical	1	1017765	junction_3	473648.80435637356	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	28	501	25.0	-4062	False	AATAAA	-16
PB.6921.19	chr2	-	5804	25	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-2	279	intron_retention	FALSE	canonical	1	108811	junction_21	617602.6890651	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	2001	5477	15.0	-2	True	AATAAA	-20
PB.6921.18	chr2	-	5872	23	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-1	279	intron_retention	FALSE	canonical	1	14712	junction_18	635424.2996634168	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	2723	5545	15.0	-1	True	AATAAA	-20
PB.6921.13	chr2	-	4359	26	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	-19	279	any annotated donor/acceptor	FALSE	canonical	1	111010	junction_6	710807.0934426627	NA	1	NA	TRUE	NA	NA	NA	C	coding	1030	3093	48	3140	15.0	-19	True	AATAAA	-20
PB.6921.12	chr2	-	4330	26	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-4	279	combination_of_known_junctions	FALSE	canonical	1	24740	junction_22	724882.7752911622	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	527	4003	15.0	-4	True	AATAAA	-20
PB.6921.16	chr2	-	6113	24	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-4	279	intron_retention	FALSE	canonical	1	1186834	junction_14	474392.5568810217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	2310	5786	15.0	-4	True	AATAAA	-20
PB.6921.15	chr2	-	6196	25	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	-17	279	intron_retention	FALSE	canonical	1	111010	junction_6	715336.7128653168	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	2323	4977	15.0	-17	True	AATAAA	-20
PB.3093.2	chr13	-	3921	18	full-splice_match	HSPH1	ENST00000320027.9	5191	18	-86	1356	26	220	multi-exon	TRUE	canonical	1	711764	junction_17	341484.71811072686	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	432	3008	50.0	-1	True	NA	NA
PB.12269.7	chrX	-	3326	6	full-splice_match	RAP2C	ENST00000620646.4	3341	6	13	2	13	-1	multi-exon	FALSE	canonical	1	2029	junction_4	207653.18357973712	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	377	730	20.0	147	False	AATAAA	-20
PB.12269.4	chrX	-	3774	5	novel_in_catalog	RAP2C	novel	3341	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	29538	junction_3	193322.69893286587	NA	5	NA	TRUE	NA	NA	NA	C	coding	117	354	825	1178	20.0	1490	False	AATAAA	-20
PB.12269.5	chrX	-	3628	5	novel_not_in_catalog	RAP2C	novel	3341	6	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	6143	junction_3	213137.64750317458	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	679	1032	20.0	-1	True	AATAAA	-20
PB.12269.2	chrX	-	3770	4	novel_in_catalog	RAP2C	novel	3341	6	NA	NA	-9	0	intron_retention	FALSE	canonical	1	13002	junction_3	199318.94415121595	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	622	1173	15.0	-6	True	AATAAA	-21
PB.12269.3	chrX	-	3939	4	full-splice_match	RAP2C	ENST00000342983.6	3896	4	-46	3	-46	-3	multi-exon	FALSE	canonical	1	71043	junction_3	171958.40421321534	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	794	1345	15.0	-1	True	AATAAA	-18
PB.3093.4	chr13	-	3565	17	full-splice_match	HSPH1	ENST00000380405.7	3480	17	-85	0	27	0	multi-exon	FALSE	canonical	1	50949	junction_6	442665.2793938772	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	431	2875	25.0	0	True	AATAAA	-24
PB.3093.5	chr13	-	3516	17	novel_in_catalog	HSPH1	novel	4987	16	NA	NA	-37	1	intron_retention	FALSE	canonical	1	3644	junction_12	439350.39576778864	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	1077	2825	25.0	1	True	AATAAA	-25
PB.9579.4	chr5	+	6598	13	novel_not_in_catalog	G3BP1	novel	535	4	NA	NA	4	-1435	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	347682.8087967617	NA	13	NA	TRUE	NA	NA	NA	C	coding	466	1401	159	1559	40.0	-2	True	NA	NA
PB.9579.7	chr5	+	2769	5	novel_not_in_catalog	G3BP1	novel	535	4	NA	NA	8	-391	intron_retention	FALSE	non_canonical	0	0	junction_4	441435.96969627147	NA	12	NA	TRUE	NA	NA	NA	C	coding	125	378	155	532	100.0	2	True	NA	NA
PB.9579.6	chr5	+	3320	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	-11	-506	8	506	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	155	1555	50.0	2	True	AAGAAA	-23
PB.9579.3	chr5	+	2431	13	novel_not_in_catalog	G3BP1	novel	535	4	NA	NA	2	20	any annotated donor/acceptor	FALSE	canonical	1	19725	junction_12	343874.5776775447	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	161	1501	30.0	-4	True	ATTAAA	-39
PB.12269.9	chrX	-	3645	5	novel_in_catalog	RAP2C	novel	3341	6	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	13002	junction_4	207357.56670182064	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	698	1051	15.0	-5	True	AATAAA	-18
PB.2364.10	chr11	+	3083	1	novel_in_catalog	ST3GAL4	novel	545	5	NA	NA	241	-47729	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	127	384	1659	2042	75.0	190	False	AATAAA	-4
PB.2364.11	chr11	+	1831	11	novel_in_catalog	ST3GAL4	novel	545	5	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	1	1957	junction_1	143619.60756487955	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	179	1249	40.0	31	False	ATTAAA	-12
PB.465.19	chr1	-	3801	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	21	-1719	-6	372	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	79	1260	25.0	39	False	GATAAA	-20
PB.1051.9	chr1	+	4773	20	full-splice_match	ZC3H11A	ENST00000367212.7	3004	20	-74	-1695	-29	1	multi-exon	FALSE	canonical	1	7347	junction_1	192727.6155120301	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	615	3047	30.0	2	True	AATAAA	-19
PB.531.6	chr1	+	3552	10	full-splice_match	ZNF326	ENST00000394583.7	1956	10	17	-1613	-5	1301	multi-exon	FALSE	canonical	1	26419	junction_3	116024.1838275086	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	284	1414	50.0	19	True	AATAAA	-23
PB.379.22	chr1	-	3475	13	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	9	-186	any annotated donor/acceptor	FALSE	canonical	1	8097	junction_4	238954.70098295654	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	1259	2200	25.0	-1	True	AATAAA	-16
PB.11453.1	chr9	+	4186	22	full-splice_match	KDM4C	ENST00000381309.7	4655	22	470	-1	-17	1	multi-exon	FALSE	canonical	1	121787	junction_17	24872.267282249064	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	96	3266	10.0	9	True	AATAAA	-19
PB.3769.2	chr15	+	3327	12	incomplete-splice_match	EIF2AK4	ENST00000263791.9	5499	39	-9	57720	-2	-422	3prime_fragment	FALSE	canonical	1	188521	junction_1	51641.8555935057	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	53	2305	30.0	-34	True	ATTAAA	-17
PB.3769.3	chr15	+	2577	12	incomplete-splice_match	EIF2AK4	ENST00000263791.9	5499	39	2	58459	2	-1161	3prime_fragment	FALSE	canonical	1	188521	junction_1	51641.8555935057	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	42	2294	80.0	-23	True	NA	NA
PB.6756.13	chr2	+	1073	9	incomplete-splice_match	R3HDM1	ENST00000409478.5	4272	23	8	89155	-4	-72	3prime_fragment	FALSE	canonical	1	138829	junction_1	73680.59206254725	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	693	381	1073	55.0	11	True	NA	NA
PB.3769.1	chr15	+	5517	39	full-splice_match	EIF2AK4	ENST00000263791.9	5499	39	-18	0	-11	0	multi-exon	TRUE	canonical	1	163871	junction_12	76731.00071285479	NA	0	NA	TRUE	NA	NA	NA	C	coding	1649	4950	62	5011	15.0	-43	True	AATAAA	-12
PB.5156.1	chr17	-	2137	9	full-splice_match	RNFT1	ENST00000305783.12	2101	9	-39	3	3	-3	multi-exon	TRUE	canonical	1	75103	junction_5	60468.10925345276	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	96	1403	30.0	-22	True	ATTAAA	-19
PB.5156.2	chr17	-	1848	7	full-splice_match	RNFT1	ENST00000466544.5	1809	7	-5	-34	-5	0	multi-exon	FALSE	canonical	1	14067	junction_5	76911.247460231	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	104	622	15.0	-30	True	AATAAA	-14
PB.3769.5	chr15	+	2299	18	incomplete-splice_match	EIF2AK4	ENST00000558629.5	4374	22	11545	1	320	0	5prime_fragment	FALSE	canonical	1	301449	junction_16	57772.92155119519	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	30	1793	15.0	105	False	AATAAA	-12
PB.531.5	chr1	+	1685	12	full-splice_match	ZNF326	ENST00000340281.8	2729	12	13	1031	-6	-719	multi-exon	FALSE	canonical	1	126504	junction_4	85565.27476650658	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1554	131	1684	50.0	18	True	NA	NA
PB.9763.1	chr6	+	4289	5	full-splice_match	FAM8A1	ENST00000259963.3	4677	5	387	1	387	-1	multi-exon	FALSE	canonical	1	46163	junction_3	30964.251722752804	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	419	910	15.0	354	False	AATAAA	-18
PB.11542.3	chr9	+	3299	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	128	1093	-28	-1093	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	4	True	NA	NA
PB.4531.6	chr16	-	2750	18	full-splice_match	COG4	ENST00000393612.8	2756	18	6	0	2	0	multi-exon	FALSE	canonical	1	13738	junction_6	161969.63144630296	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	18	2312	20.0	-1	True	AATAAA	-15
PB.4531.5	chr16	-	3859	17	novel_in_catalog	COG4	novel	3000	20	NA	NA	2	0	intron_retention	FALSE	canonical	1	320821	junction_13	114497.31710146571	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	1694	2890	20.0	-5	True	AATAAA	-15
PB.4531.2	chr16	-	3586	18	novel_in_catalog	COG4	novel	3000	20	NA	NA	2	0	intron_retention	FALSE	canonical	1	320821	junction_14	111779.62202061995	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	1694	3145	15.0	-5	True	AATAAA	-18
PB.4531.3	chr16	-	2819	19	full-splice_match	COG4	ENST00000323786.9	2833	19	13	1	2	-1	multi-exon	FALSE	canonical	1	320821	junction_15	112097.32844694096	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	22	2379	20.0	-5	True	AATAAA	-17
PB.4531.1	chr16	-	3751	19	novel_not_in_catalog	COG4	novel	3000	20	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_8	226804.74057729336	NA	14	2	TRUE	NA	NA	NA	C	coding	211	636	2441	3076	15.0	-2	True	AATAAA	-19
PB.7764.7	chr22	+	2171	14	novel_not_in_catalog	EIF3L	novel	3220	13	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	2345	junction_13	1408633.5634527097	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	28	1722	25.0	4	True	NA	NA
PB.7764.6	chr22	+	1812	12	novel_in_catalog	EIF3L	novel	3220	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	39942	junction_3	1380554.9428159392	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	276	1646	15.0	0	True	AGTAAA	-17
PB.7764.5	chr22	+	1811	12	novel_in_catalog	EIF3L	novel	3220	13	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	69344	junction_11	1502351.2090760814	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	32	1645	15.0	0	True	AGTAAA	-17
PB.7764.4	chr22	+	1894	13	full-splice_match	EIF3L	ENST00000624234.3	2091	13	45	152	0	0	multi-exon	FALSE	canonical	1	1015915	junction_4	1253689.1434389052	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	34	1728	15.0	-2	True	AGTAAA	-17
PB.7764.3	chr22	+	2670	13	full-splice_match	EIF3L	ENST00000412331.6	3220	13	549	1	0	-1	multi-exon	FALSE	canonical	1	1015915	junction_4	1253689.1434389052	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	34	1728	25.0	-2	True	NA	NA
PB.7764.2	chr22	+	2019	14	novel_in_catalog	EIF3L	novel	3220	13	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	1	12808	junction_13	1536878.3080964198	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	37	1830	15.0	-5	True	AGTAAA	-17
PB.7764.1	chr22	+	2103	14	novel_not_in_catalog	EIF3L	novel	3220	13	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	8647	junction_9	1472806.6261024086	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	1044	1937	15.0	-6	True	AGTAAA	-17
PB.1036.2	chr1	+	1639	6	full-splice_match	TIMM17A	ENST00000367287.4	1659	6	19	1	0	-1	multi-exon	FALSE	canonical	1	708416	junction_4	449012.19405597437	NA	2	NA	TRUE	NA	NA	NA	C	coding	171	516	18	533	35.0	4	True	NA	NA
PB.7107.17	chr2	-	4869	14	full-splice_match	PASK	ENST00000403638.7	5161	14	-41	333	0	-5	multi-exon	FALSE	canonical	1	48342	junction_13	31779.745404895868	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3432	134	3565	20.0	770	False	NA	NA
PB.7107.14	chr2	-	2852	10	novel_in_catalog	PASK	novel	4572	18	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	690	junction_9	88363.6933612694	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	301	2583	30.0	-43	False	ATTAAA	-17
PB.9763.5	chr6	+	3489	5	full-splice_match	FAM8A1	ENST00000259963.3	4677	5	1	1187	1	-1187	multi-exon	FALSE	canonical	1	46163	junction_3	30964.251722752804	NA	3	NA	TRUE	NA	NA	NA	C	coding	413	1242	55	1296	55.0	-32	True	NA	NA
PB.7107.12	chr2	-	3727	15	novel_in_catalog	PASK	novel	4572	18	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	1	2152	junction_14	75042.43606487612	NA	0	NA	TRUE	NA	NA	NA	C	coding	1104	3315	138	3452	20.0	-34	True	ATTAAA	-23
PB.8885.8	chr4	+	4440	24	novel_in_catalog	SMARCAD1	novel	5017	24	NA	NA	99	-3	combination_of_known_junctions	FALSE	canonical	1	82523	junction_1	70368.59584938969	NA	4	1	TRUE	NA	NA	NA	C	coding	1026	3081	76	3156	30.0	8	True	AATAAA	-15
PB.7107.10	chr2	-	5674	8	novel_in_catalog	PASK	novel	4572	18	NA	NA	15	0	intron_retention	FALSE	canonical	1	80973	junction_7	77874.97900913662	NA	6	1	TRUE	NA	NA	NA	C	coding	664	1995	268	2262	30.0	-6	True	ATTAAA	-17
PB.7764.8	chr22	+	2365	12	novel_in_catalog	EIF3L	novel	3220	13	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	1015915	junction_3	1298549.653752738	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	579	2201	20.0	-542	False	AGTAAA	-15
PB.7222.12	chr20	-	2014	6	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-165	75	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	B	coding	100	303	430	732	20.0	NA	False	AATAAA	-27
PB.7222.13	chr20	-	5496	5	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-149	74	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	16	NA	TRUE	NA	NA	NA	B	coding	144	435	2	436	20.0	NA	False	AATAAA	-26
PB.7222.10	chr20	-	1839	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-129	2611	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	102	309	394	702	25.0	NA	False	NA	NA
PB.7222.11	chr20	-	1805	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-129	2569	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	128	387	394	780	35.0	NA	False	AATATA	-24
PB.11507.20	chr9	-	2583	17	incomplete-splice_match	UBAP2	ENST00000379238.5	4289	29	14	13636	0	-7	3prime_fragment	FALSE	canonical	1	179657	junction_16	57058.6162894886	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	108	2183	85.0	-1	True	NA	NA
PB.7222.14	chr20	-	2362	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-138	74	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	149	450	632	1081	20.0	NA	False	AATAAA	-26
PB.7222.15	chr20	-	5207	5	novel_in_catalog	FRG1EP	novel	770	9	NA	NA	-165	74	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	11	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-26
PB.11613.1	chr9	-	3299	7	full-splice_match	GNAQ	ENST00000286548.8	6539	7	190	3050	190	-3050	multi-exon	FALSE	canonical	1	73424	junction_6	64130.41855122696	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	34	1113	90.0	1223	False	NA	NA
PB.869.5	chr1	+	1966	6	full-splice_match	NIT1	ENST00000496861.5	1351	6	-116	-499	-1	0	multi-exon	FALSE	canonical	1	366013	junction_2	63871.899336093025	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	789	1664	10.0	-1	True	CATAAA	-4
PB.8885.2	chr4	+	4737	23	novel_in_catalog	SMARCAD1	novel	5017	24	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	82523	junction_1	68260.84434586139	NA	2	NA	TRUE	NA	NA	NA	C	coding	768	2307	178	2484	30.0	0	True	AATAAA	-15
PB.869.7	chr1	+	2111	6	full-splice_match	NIT1	ENST00000485594.1	1037	6	-681	-393	0	4	multi-exon	FALSE	canonical	1	4624	junction_2	196573.6898747134	NA	3	1	TRUE	NA	NA	NA	C	coding	146	441	1239	1679	15.0	0	True	AATAAA	-17
PB.869.6	chr1	+	1484	7	full-splice_match	NIT1	ENST00000368009.6	1362	7	4	-126	0	0	multi-exon	FALSE	canonical	1	262503	junction_1	94058.74863158073	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	73	1056	20.0	0	True	AATAAA	-13
PB.869.1	chr1	+	2360	4	novel_in_catalog	NIT1	novel	790	6	NA	NA	-4	0	intron_retention	FALSE	canonical	1	492720	junction_3	23236.853587925078	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1618	2058	10.0	-493	False	CATAAA	-4
PB.869.3	chr1	+	2100	7	full-splice_match	NIT1	ENST00000368008.5	2081	7	-24	5	-7	-5	multi-exon	FALSE	canonical	1	27641	junction_6	169657.6139078022	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	84	815	35.0	-11	True	AATAAA	-15
PB.8885.3	chr4	+	4429	24	full-splice_match	SMARCAD1	ENST00000359052.8	5017	24	-3	591	-3	-122	multi-exon	FALSE	canonical	1	82523	junction_1	73412.37898837947	NA	1	NA	TRUE	NA	NA	NA	C	coding	1028	3087	178	3264	15.0	0	True	ATTAAA	-17
PB.869.9	chr1	+	2541	3	novel_in_catalog	NIT1	novel	790	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	492720	junction_2	24749.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1799	2239	10.0	2	True	CATAAA	-4
PB.869.8	chr1	+	1982	6	full-splice_match	NIT1	ENST00000485594.1	1037	6	-680	-265	1	2	multi-exon	FALSE	canonical	1	4624	junction_2	196573.6898747134	NA	1	1	TRUE	NA	NA	NA	C	coding	146	441	1238	1678	10.0	1	True	CATAAA	-6
PB.6776.1	chr2	+	2993	1	antisense	novelGene_RND3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-9923	False	NA	NA
PB.8885.1	chr4	+	5025	24	full-splice_match	SMARCAD1	ENST00000359052.8	5017	24	-5	-3	-5	1	multi-exon	FALSE	canonical	1	82523	junction_1	73412.37898837947	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	180	3266	15.0	-2	True	AATAAA	-19
PB.8885.7	chr4	+	4524	24	full-splice_match	SMARCAD1	ENST00000359052.8	5017	24	21	472	21	-3	multi-exon	FALSE	canonical	1	82523	junction_1	73412.37898837947	NA	2	1	TRUE	NA	NA	NA	C	coding	1028	3087	154	3240	30.0	24	True	AATAAA	-15
PB.6082.3	chr19	+	2104	13	full-splice_match	VASP	ENST00000245932.10	2305	13	27	174	27	-133	multi-exon	FALSE	canonical	1	628107	junction_5	513379.57052156806	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	330	1472	15.0	-44	True	NA	NA
PB.6082.2	chr19	+	2141	10	novel_in_catalog	VASP	novel	696	3	NA	NA	26	-3	no_combination_of_known_junctions	FALSE	canonical	1	85	junction_7	572317.3875240862	NA	13	1	TRUE	NA	NA	NA	C	coding	335	1008	331	1338	35.0	-45	True	AATAAA	-16
PB.6082.1	chr19	+	1842	11	novel_not_in_catalog	VASP	novel	696	3	NA	NA	15	3	any annotated donor/acceptor	TRUE	canonical	1	2546	junction_3	620428.8765894203	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	689	1033	25.0	-56	True	AATAAA	-22
PB.10169.25	chr6	-	3348	16	incomplete-splice_match	LAMA4	ENST00000389463.8	6297	39	7	44940	-5	-11670	3prime_fragment	FALSE	canonical	1	174854	junction_15	46269.60501639638	NA	4	NA	TRUE	NA	NA	NA	C	coding	706	2121	277	2397	40.0	128	False	AATAAA	-24
PB.10169.22	chr6	-	5848	38	novel_in_catalog	LAMA4	novel	6547	39	NA	NA	-9	157	no_combination_of_known_junctions	FALSE	canonical	1	8749	junction_10	81407.89961387489	NA	1	NA	TRUE	NA	NA	NA	C	coding	1272	3819	231	4049	50.0	-10	True	AATAAA	-15
PB.6082.6	chr19	+	1622	9	novel_not_in_catalog	VASP	novel	696	3	NA	NA	-13	19	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	644841.1167004629	NA	2	1	TRUE	NA	NA	NA	C	coding	117	354	444	797	20.0	-12	True	AATAAA	-38
PB.6082.5	chr19	+	2014	13	full-splice_match	VASP	ENST00000245932.10	2305	13	295	-4	201	4	multi-exon	FALSE	canonical	1	628107	junction_5	513379.57052156806	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	62	1204	25.0	-7753	False	AATAAA	-23
PB.6082.4	chr19	+	1845	13	full-splice_match	VASP	ENST00000245932.10	2305	13	28	432	28	219	multi-exon	FALSE	canonical	1	628107	junction_5	513379.57052156806	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	329	1471	70.0	-43	True	NA	NA
PB.7080.6	chr2	-	2469	18	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	0	-220	any annotated donor/acceptor	FALSE	canonical	1	2319	junction_15	34356.2881571586	NA	0	NA	TRUE	NA	NA	NA	B	coding	783	2349	119	2467	60.0	-1	True	ATTAAA	-3
PB.1149.2	chr1	+	2120	4	novel_in_catalog	DEGS1	novel	957	3	NA	NA	43	-3	intron_retention	FALSE	canonical	1	13420	junction_3	307639.5825290801	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	124	990	25.0	-26	True	AATAAA	-25
PB.1149.3	chr1	+	1829	4	novel_in_catalog	DEGS1	novel	957	3	NA	NA	-40	2	intron_retention	FALSE	canonical	1	13420	junction_3	307639.5825290801	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	112	978	25.0	-14	True	AATAAA	-15
PB.1149.4	chr1	+	2034	3	full-splice_match	DEGS1	ENST00000323699.8	2101	3	69	-2	-26	2	multi-exon	FALSE	canonical	1	684602	junction_1	464576.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	98	1069	15.0	0	True	AATAAA	-30
PB.1149.5	chr1	+	1650	3	full-splice_match	DEGS1	ENST00000323699.8	2101	3	69	382	-26	-98	multi-exon	FALSE	canonical	1	684602	junction_1	464576.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	98	1069	70.0	0	True	NA	NA
PB.10169.28	chr6	-	2416	2	full-splice_match	LAMA4	ENST00000368638.4	1061	2	-15	-1340	-3	1340	multi-exon	FALSE	canonical	1	174854	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	287	649	35.0	118	False	ATTAAA	-18
PB.8020.8	chr3	+	4342	19	novel_not_in_catalog	OXSR1	novel	471	2	NA	NA	-27	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95651.71552797391	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	166	1749	15.0	-27	True	AATAAA	-13
PB.6301.3	chr2	+	3442	10	incomplete-splice_match	ASAP2	ENST00000281419.7	5712	28	172276	1	-9253	0	5prime_fragment	FALSE	canonical	1	40893	junction_5	61480.020071564715	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	184	1092	25.0	72	False	AATAAA	-15
PB.6301.2	chr2	+	5058	25	novel_not_in_catalog	ASAP2	novel	5712	28	NA	NA	-15869	0	any annotated donor/acceptor	FALSE	canonical	1	3097	junction_1	61373.33736031515	NA	2	NA	TRUE	NA	NA	NA	C	coding	843	2532	177	2708	25.0	-4	True	AATAAA	-15
PB.6301.1	chr2	+	5188	27	full-splice_match	ASAP2	ENST00000315273.4	5582	27	388	6	388	0	multi-exon	FALSE	canonical	1	61449	junction_22	50737.93936891649	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	97	2838	25.0	275	False	AATAAA	-15
PB.7080.4	chr2	-	3627	29	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	11	-3	any annotated donor/acceptor	FALSE	canonical	1	2319	junction_26	45030.11643836607	NA	1	NA	TRUE	NA	NA	NA	B	coding	1071	3216	108	3323	20.0	10	True	NA	NA
PB.7080.5	chr2	-	2580	18	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	-1	-110	any annotated donor/acceptor	FALSE	canonical	1	2319	junction_15	34356.2881571586	NA	0	NA	TRUE	NA	NA	NA	B	coding	804	2415	120	2534	55.0	-2	True	NA	NA
PB.4175.2	chr16	-	2101	8	full-splice_match	RNPS1	ENST00000397086.6	2069	8	-31	-1	-27	1	multi-exon	FALSE	canonical	1	1712	junction_4	184942.79051774307	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	335	1252	5.0	967	False	AATAAA	-25
PB.7635.4	chr22	+	1677	1	novel_in_catalog	UBE2L3	novel	3007	4	NA	NA	-11	-54639	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	5	True	NA	NA
PB.9545.21	chr5	+	1899	12	incomplete-splice_match	TCERG1	ENST00000549332.1	3518	23	-21	30683	-7	-134	3prime_fragment	FALSE	canonical	1	96933	junction_5	137320.62317627552	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1872	26	1897	65.0	-8	True	AAGAAA	-26
PB.4175.1	chr16	-	3878	8	novel_in_catalog	RNPS1	novel	2069	8	NA	NA	2	-1	intron_retention	FALSE	canonical	1	1712	junction_4	192825.2729995395	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	2121	3038	25.0	13	True	AATAAA	-16
PB.4175.6	chr16	-	2047	7	full-splice_match	RNPS1	ENST00000566458.5	2037	7	-17	7	-2	-1	multi-exon	FALSE	canonical	1	1712	junction_4	205954.0772896284	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	359	1207	25.0	432	False	AATAAA	-16
PB.4175.7	chr16	-	2139	9	novel_not_in_catalog	RNPS1	novel	2069	8	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	189266.15792643538	NA	2	2	TRUE	NA	NA	NA	C	coding	305	918	376	1293	10.0	993	False	AATAAA	-22
PB.4175.4	chr16	-	2167	8	novel_in_catalog	RNPS1	novel	2069	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1712	junction_4	188379.65837550897	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	403	1320	10.0	987	False	AATAAA	-23
PB.9545.24	chr5	+	2899	19	incomplete-splice_match	TCERG1	ENST00000394421.6	3633	21	-5	3122	-5	553	3prime_fragment	FALSE	canonical	1	212876	junction_11	118086.79418744984	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2874	24	2897	65.0	-6	True	NA	NA
PB.10381.3	chr7	+	1971	13	novel_not_in_catalog	WIPI2	novel	4476	13	NA	NA	17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	282834.9775501706	NA	15	2	TRUE	NA	NA	NA	C	coding	425	1278	117	1394	10.0	-68	False	ATTAAA	-16
PB.4175.8	chr16	-	1941	8	full-splice_match	RNPS1	ENST00000320225.9	2241	8	298	2	0	-1	multi-exon	FALSE	canonical	1	1712	junction_4	193458.37175011085	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	178	1095	10.0	11	True	AATAAA	-22
PB.4175.9	chr16	-	2725	7	novel_not_in_catalog	RNPS1	novel	2069	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1712	junction_4	173806.58044408637	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	59	673	25.0	11	True	AATAAA	-17
PB.6049.2	chr19	+	2609	5	full-splice_match	ZNF155	ENST00000270014.6	2596	5	-12	-1	0	1	multi-exon	FALSE	canonical	1	20592	junction_1	19949.29884106206	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	141	1757	0.0	3	True	NA	NA
PB.8020.6	chr3	+	4134	18	full-splice_match	OXSR1	ENST00000311806.7	4553	18	415	4	273	-4	multi-exon	FALSE	canonical	1	241615	junction_1	55954.3469268199	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	126	1541	15.0	273	False	AATAAA	-13
PB.10381.1	chr7	+	1646	12	full-splice_match	WIPI2	ENST00000382384.6	1948	12	-36	338	-9	28	multi-exon	FALSE	canonical	1	259902	junction_1	212710.66816404246	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	184	1461	20.0	4	True	AATACA	-14
PB.531.8	chr1	+	2432	12	novel_not_in_catalog	ZNF326	novel	1956	10	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	1	7200	junction_4	110683.36408903604	NA	5	NA	TRUE	NA	NA	NA	C	coding	494	1485	114	1598	10.0	35	True	AATACA	-15
PB.8611.1	chr3	-	857	5	full-splice_match	APOD	ENST00000343267.7	1130	5	249	24	-2	-24	multi-exon	FALSE	canonical	1	1883074	junction_4	213276.54250101556	NA	3	NA	TRUE	NA	NA	NA	A	coding	189	570	114	683	20.0	12	False	AATAAA	-17
PB.4787.8	chr17	-	1788	15	full-splice_match	NCOR1	ENST00000411510.5	1883	15	-10	105	1	-55	multi-exon	FALSE	canonical	1	125290	junction_14	118019.31224481777	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1530	257	1786	70.0	-14	True	NA	NA
PB.8506.4	chr3	-	2209	4	full-splice_match	BCHE	ENST00000264381.7	2454	4	8	237	-2	-62	multi-exon	FALSE	canonical	1	62712	junction_3	25497.982172887503	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	37	1968	40.0	-45	False	ATTAAA	-41
PB.8506.5	chr3	-	5700	4	novel_in_catalog	BCHE	novel	2454	4	NA	NA	-10	-1769	combination_of_known_junctions	FALSE	canonical	1	1523	junction_1	38407.91794235489	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	3	1898	35.0	-11	False	AATAAA	-16
PB.4928.18	chr17	-	4461	21	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	1	60436	junction_15	58736.77853874862	NA	0	NA	TRUE	NA	NA	NA	C	coding	1302	3909	78	3986	20.0	-35	True	AATAAA	-17
PB.4928.19	chr17	-	4337	21	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	1	25093	junction_19	69272.7997010912	NA	0	NA	TRUE	NA	NA	NA	C	coding	1255	3768	95	3862	20.0	2505	False	AATAAA	-17
PB.9964.9	chr6	-	2290	11	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	1027614	junction_4	432909.7510783974	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	963	1529	5.0	0	True	AATAAA	-17
PB.8506.2	chr3	-	3417	5	novel_in_catalog	BCHE	novel	2454	4	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	1523	junction_2	39864.28074965733	NA	2	NA	TRUE	NA	NA	NA	C	coding	609	1830	59	1888	25.0	-1	True	ATTAAA	-43
PB.8506.3	chr3	-	2400	4	full-splice_match	BCHE	ENST00000264381.7	2454	4	47	7	-5	-6	multi-exon	FALSE	canonical	1	62712	junction_3	25497.982172887503	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	64	1929	25.0	-6	True	ATTAAA	-43
PB.4928.12	chr17	-	4649	23	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	1	25093	junction_21	67875.36423787024	NA	0	NA	TRUE	NA	NA	NA	C	coding	1368	4107	67	4173	20.0	-24	True	AATAAA	-18
PB.4928.13	chr17	-	4642	22	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	51506	junction_15	66935.55133080763	NA	0	NA	TRUE	NA	NA	NA	C	coding	1357	4074	93	4166	20.0	2507	False	AATAAA	-18
PB.4928.10	chr17	-	4489	22	full-splice_match	SYNRG	ENST00000612223.4	8229	22	74	3666	-11	-2	multi-exon	FALSE	canonical	1	60436	junction_16	54120.230288587976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1314	3945	68	4012	20.0	-25	True	AATAAA	-19
PB.4928.11	chr17	-	4802	23	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	51506	junction_16	58471.33632391287	NA	0	NA	TRUE	NA	NA	NA	C	coding	1415	4248	79	4326	20.0	-36	True	AATAAA	-18
PB.4928.16	chr17	-	4115	21	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	1	31414	junction_15	63795.52794426503	NA	0	NA	TRUE	NA	NA	NA	C	coding	1190	3573	67	3639	20.0	-24	True	AATAAA	-18
PB.5617.15	chr19	-	3624	14	novel_in_catalog	EEF2	novel	352	2	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	18159193	junction_10	3261327.2786588683	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	85	2565	10.0	-2	True	AATAAA	-15
PB.4928.14	chr17	-	4336	22	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	58203	junction_8	59803.90823281007	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	54	3860	20.0	-11	True	AATAAA	-18
PB.4928.15	chr17	-	4249	21	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	31414	junction_15	58193.96396998575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1236	3711	63	3773	20.0	-20	True	AATAAA	-18
PB.11696.11	chr9	+	2526	18	incomplete-splice_match	SMC2	ENST00000374793.7	5909	25	-17	16467	13	-14701	3prime_fragment	FALSE	canonical	1	98609	junction_1	65779.90787130287	NA	1	1	TRUE	NA	NA	NA	C	coding	765	2295	231	2525	75.0	-12	True	ACTAAA	-8
PB.11357.5	chr8	-	4149	29	novel_in_catalog	PTK2	novel	4955	32	NA	NA	10	-3	no_combination_of_known_junctions	FALSE	canonical	1	9568	junction_24	149008.28083806726	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	927	3068	0.0	5	True	ATTAAA	-35
PB.10112.1	chr6	+	6663	10	novel_not_in_catalog	CASP8AP2	novel	1153	7	NA	NA	-23	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	51553.36994145957	NA	8	1	TRUE	NA	NA	NA	C	coding	1989	5970	93	6062	20.0	-38	True	AATAAA	-21
PB.2509.13	chr12	-	3267	11	full-splice_match	BCAT1	ENST00000261192.11	9674	11	286	6121	-87	-1322	multi-exon	FALSE	canonical	1	251866	junction_9	85028.1542363469	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	242	1402	65.0	-12	True	AGTAAA	-13
PB.2509.15	chr12	-	2783	11	full-splice_match	BCAT1	ENST00000261192.11	9674	11	326	6565	-47	894	multi-exon	FALSE	canonical	1	251866	junction_9	85028.1542363469	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	202	1362	50.0	2923	False	AATAAA	-23
PB.2950.1	chr12	-	2419	1	novel_in_catalog	TRIAP1	novel	1182	2	NA	NA	-11	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	125	378	30	407	20.0	1	True	AATAAA	-24
PB.11357.3	chr8	-	4360	31	novel_in_catalog	PTK2	novel	4955	32	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	1	92123	junction_30	107054.83611020725	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	133	3291	15.0	4	True	ATTAAA	-23
PB.11357.2	chr8	-	4620	32	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-5	-2	no_combination_of_known_junctions	FALSE	canonical	1	12498	junction_30	130095.65324369306	NA	1	NA	TRUE	NA	NA	NA	C	coding	1052	3159	387	3545	15.0	787	False	ATTAAA	-29
PB.6851.5	chr2	-	4135	14	full-splice_match	ATF2	ENST00000264110.6	4176	14	39	2	1	-2	multi-exon	FALSE	canonical	1	239115	junction_9	79357.56893942965	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	261	1778	15.0	32	True	AATAAA	-24
PB.9461.3	chr5	+	1872	2	full-splice_match	C5orf24	ENST00000394976.3	5065	2	96	3097	-12	-772	multi-exon	FALSE	canonical	1	247691	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	133	699	75.0	0	True	NA	NA
PB.9452.2	chr5	-	1927	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	88	7459	0	944	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	97	588	20.0	-1	True	AATAAA	-21
PB.10381.9	chr7	+	2131	13	full-splice_match	WIPI2	ENST00000288828.8	4476	13	40	2305	-18	-3	multi-exon	FALSE	canonical	1	43561	junction_1	285151.1115804312	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	193	1557	10.0	-5	True	ATTAAA	-13
PB.1018.8	chr1	-	4063	16	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	25	37826	25	-37822	3prime_fragment	FALSE	canonical	1	118067	junction_2	21593.718348322196	NA	1	NA	TRUE	NA	NA	NA	C	coding	1277	3831	233	4063	70.0	-1	True	AAGAAA	-33
PB.3457.24	chr14	+	4459	41	novel_in_catalog	KTN1	novel	291	2	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	1	35771	junction_23	394050.35355754656	NA	1	NA	TRUE	NA	NA	NA	C	coding	1277	3834	152	3985	25.0	-8	True	AATAAA	-18
PB.9461.1	chr5	+	2434	3	full-splice_match	C5orf24	ENST00000504727.1	2923	3	-148	637	-40	-14	multi-exon	FALSE	canonical	1	35682	junction_2	106004.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	269	736	80.0	-48	True	NA	NA
PB.3983.16	chr15	-	2183	4	novel_in_catalog	FAM219B	novel	3550	5	NA	NA	11	854	intron_retention	FALSE	canonical	1	87367	junction_3	147185.20230044262	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-11	True	AATAAA	-13
PB.3983.14	chr15	-	2716	4	full-splice_match	FAM219B	ENST00000564857.1	1057	4	-96	-1563	11	855	multi-exon	FALSE	canonical	1	259789	junction_3	53471.92340534111	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	27	410	25.0	-11	True	AATAAA	-14
PB.3983.15	chr15	-	2349	6	full-splice_match	FAM219B	ENST00000563069.5	1552	6	58	-855	15	855	multi-exon	FALSE	canonical	1	45908	junction_3	129258.31563191592	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	23	469	25.0	-7	True	AATAAA	-14
PB.3983.12	chr15	-	2607	5	novel_in_catalog	FAM219B	novel	3550	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	87367	junction_4	132898.9388003155	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-12
PB.3983.13	chr15	-	2367	5	full-splice_match	FAM219B	ENST00000357635.9	3550	5	209	974	-29	861	multi-exon	FALSE	canonical	1	259789	junction_4	65541.58322202782	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	113	709	25.0	-33	False	AATAAA	-20
PB.3983.10	chr15	-	3200	5	novel_in_catalog	FAM219B	novel	3550	5	NA	NA	14	0	intron_retention	FALSE	canonical	1	9421	junction_3	157106.73056615843	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	AATAAA	-13
PB.9461.7	chr5	+	5068	2	full-splice_match	C5orf24	ENST00000394976.3	5065	2	-4	1	-4	-1	multi-exon	FALSE	canonical	1	247691	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	233	799	15.0	-12	True	AATAAA	-20
PB.9461.6	chr5	+	2872	3	novel_in_catalog	DDX46	novel	530	5	NA	NA	20165	4595	no_combination_of_known_junctions	FALSE	canonical	1	6126	junction_2	120782.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	239	541	40.0	-18	True	AATAAA	-12
PB.6572.3	chr2	+	1813	8	full-splice_match	HTRA2	ENST00000258080.7	2370	8	558	-1	-55	1	multi-exon	FALSE	canonical	1	299610	junction_1	115470.09670499641	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	73	1449	0.0	-65	True	AAGAAA	-45
PB.9461.5	chr5	+	2929	3	full-splice_match	C5orf24	ENST00000504727.1	2923	3	-7	1	-7	-1	multi-exon	FALSE	canonical	1	35682	junction_2	106004.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	128	595	25.0	5	True	AATAAA	-15
PB.6572.1	chr2	+	1637	8	full-splice_match	HTRA2	ENST00000258080.7	2370	8	562	171	-51	-15	multi-exon	FALSE	canonical	1	299610	junction_1	115470.09670499641	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	69	1445	50.0	-61	True	AATAAA	-17
PB.482.4	chr1	-	1865	11	full-splice_match	PIGK	ENST00000370812.7	4596	11	0	2731	0	481	multi-exon	FALSE	canonical	1	253901	junction_6	71829.42475169909	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	25	1212	65.0	-1	True	NA	NA
PB.482.5	chr1	-	1554	11	full-splice_match	PIGK	ENST00000370812.7	4596	11	1	3041	1	171	multi-exon	FALSE	canonical	1	253901	junction_6	71829.42475169909	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	24	1211	25.0	0	True	ATTAAA	-17
PB.9461.4	chr5	+	1837	2	full-splice_match	C5orf24	ENST00000394976.3	5065	2	-31	3259	-31	-934	multi-exon	FALSE	canonical	1	247691	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	260	826	65.0	-39	True	NA	NA
PB.482.1	chr1	-	4605	11	full-splice_match	PIGK	ENST00000370812.7	4596	11	-4	-5	0	5	multi-exon	FALSE	canonical	1	253901	junction_6	71829.42475169909	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	29	1216	25.0	-5	True	ATTAAA	-22
PB.482.2	chr1	-	2777	11	full-splice_match	PIGK	ENST00000370812.7	4596	11	2	1817	2	1395	multi-exon	FALSE	canonical	1	253901	junction_6	71829.42475169909	NA	3	NA	TRUE	NA	NA	NA	C	coding	395	1188	23	1210	25.0	1	True	TATAAA	-17
PB.11635.3	chr9	+	1489	8	novel_in_catalog	CTSL	novel	2177	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	237620	junction_1	600704.5404761761	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	203	1204	10.0	-2	True	AATAAA	-17
PB.4240.1	chr16	-	2221	5	full-splice_match	EMP2	ENST00000359543.7	5197	5	47	2929	-19	1498	multi-exon	FALSE	canonical	1	334827	junction_4	154271.9313604633	NA	3	NA	TRUE	NA	NA	NA	A	coding	167	504	164	667	90.0	-7	True	NA	NA
PB.11919.4	chr9	-	2131	12	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-18	1	intron_retention	FALSE	canonical	1	192692	junction_11	505327.04074460774	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	32	1168	5.0	-16	True	AATAAA	-22
PB.9248.4	chr5	+	4256	28	novel_in_catalog	KIF2A	novel	759	6	NA	NA	50424	91332	no_combination_of_known_junctions	FALSE	canonical	1	147	junction_6	67308.88588486462	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	174	2993	15.0	-14	True	ATTAAA	-18
PB.8606.4	chr3	+	1989	1	full-splice_match	FAM43A	ENST00000329759.5	2494	1	436	69	436	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	371	1116	4	1119	30.0	300	False	TATAAA	-18
PB.8914.3	chr4	-	2402	8	novel_in_catalog	INTS12	novel	1927	8	NA	NA	-1	0	intron_retention	FALSE	canonical	1	3337	junction_7	111325.47089557919	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	911	2299	25.0	7	True	AATAAA	-14
PB.8816.1	chr4	-	2452	7	novel_not_in_catalog	COX18	novel	6846	6	NA	NA	7	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	59791.27034781545	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	543	1091	20.0	-19	True	AATAAA	-23
PB.9110.1	chr4	+	3230	1	novel_in_catalog	LINC01060	novel	468	5	NA	NA	76283	26739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	NA	False	AAGAAA	-16
PB.2505.10	chr12	-	4392	25	novel_not_in_catalog	C2CD5	novel	4436	25	NA	NA	-10	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	62098.183370279745	NA	18	3	TRUE	NA	NA	NA	C	coding	1003	3012	213	3224	55.0	32	True	AATAAA	-9
PB.7019.2	chr2	-	1974	8	novel_in_catalog	NHEJ1	novel	1954	7	NA	NA	-6	-30	combination_of_known_junctions	FALSE	canonical	1	4653	junction_7	70937.21075280417	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	53	952	70.0	-7	True	NA	NA
PB.2505.12	chr12	-	3390	7	novel_not_in_catalog	C2CD5	novel	4436	25	NA	NA	-3	-2563	any annotated donor/acceptor	FALSE	canonical	1	598	junction_1	86738.48217999257	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	43	912	25.0	0	True	AATAAA	-20
PB.1234.35	chr1	-	1693	10	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-31	-13098	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	123991.04530659551	NA	1	NA	TRUE	NA	NA	NA	B	coding	478	1434	258	1691	50.0	-9	True	GATAAA	-6
PB.10236.1	chr6	-	3035	4	novel_not_in_catalog	AL591468.1	novel	573	2	NA	NA	-5403	710	any annotated donor/acceptor	FALSE	canonical	1	120	junction_3	451.98918374472436	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	6456	False	NA	NA
PB.1234.31	chr1	-	2307	13	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-12	91	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	114323.53028755596	NA	0	NA	TRUE	NA	NA	NA	B	coding	687	2061	246	2306	55.0	10	True	AAGAAA	-19
PB.9256.2	chr5	-	4168	12	novel_not_in_catalog	SGTB	novel	5469	11	NA	NA	14	-564	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	55054.219924581004	NA	9	NA	TRUE	NA	NA	NA	B	coding	304	915	223	1137	30.0	-8	True	ATTAAA	-19
PB.9256.1	chr5	-	4763	12	novel_not_in_catalog	SGTB	novel	5469	11	NA	NA	-12	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	55054.219924581004	NA	4	NA	TRUE	NA	NA	NA	B	coding	304	915	249	1163	30.0	870	False	AATAAA	-21
PB.1234.32	chr1	-	1996	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-2	91	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	127816.15027404022	NA	1	1	TRUE	NA	NA	NA	B	coding	589	1767	229	1995	55.0	20	True	AAGAAA	-19
PB.10395.8	chr7	-	2153	5	full-splice_match	KDELR2	ENST00000258739.8	2884	5	49	682	-3	-1	multi-exon	FALSE	canonical	1	1596339	junction_4	267192.2000063812	NA	3	NA	TRUE	NA	NA	NA	C	coding	212	639	137	775	40.0	-42	True	ATTAAA	-12
PB.10395.9	chr7	-	2115	6	novel_not_in_catalog	DAGLB	novel	2385	15	NA	NA	0	-16046	any annotated donor/acceptor	TRUE	canonical	1	29	junction_1	853924.0956641053	NA	2	1	TRUE	NA	NA	NA	C	coding	212	639	134	772	35.0	-39	True	ATTAAA	-28
PB.10395.1	chr7	-	2850	5	full-splice_match	KDELR2	ENST00000258739.8	2884	5	24	10	24	-10	multi-exon	FALSE	canonical	1	1596339	junction_4	267192.2000063812	NA	7	NA	TRUE	NA	NA	NA	C	coding	212	639	162	800	25.0	-67	False	AATAAA	-16
PB.10395.2	chr7	-	2927	6	novel_not_in_catalog	DAGLB	novel	2385	15	NA	NA	21	-15381	any annotated donor/acceptor	FALSE	canonical	1	7999	junction_5	1074507.8135911343	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	113	868	10.0	-18	True	AATAAA	-25
PB.10395.5	chr7	-	3020	6	novel_in_catalog	DAGLB	novel	2385	15	NA	NA	0	-15390	no_combination_of_known_junctions	FALSE	canonical	1	3086	junction_5	1077288.0305923016	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	518	970	25.0	-39	True	AATAAA	-16
PB.10395.7	chr7	-	2284	6	novel_not_in_catalog	DAGLB	novel	2385	15	NA	NA	0	-16045	any annotated donor/acceptor	FALSE	canonical	1	7999	junction_5	1074507.8135911343	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	134	889	30.0	-39	True	ATTAAA	-29
PB.1393.3	chr10	-	4987	7	full-splice_match	MARCH8	ENST00000319836.7	5272	7	285	0	-23	0	multi-exon	FALSE	canonical	1	170428	junction_6	80799.1174197191	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	472	1341	40.0	285	False	AATAAA	-11
PB.5858.1	chr19	-	1289	5	novel_not_in_catalog	NR2C2AP	novel	859	6	NA	NA	-6	3	intron_retention	FALSE	non_canonical	0	0	junction_1	117389.46511825497	NA	1	NA	TRUE	NA	NA	NA	B	coding	139	420	358	777	35.0	-10	True	TATAAA	-18
PB.5392.1	chr18	+	2422	6	novel_not_in_catalog	APCDD1	novel	3809	5	NA	NA	1	798	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	106508.99892948013	NA	1	NA	TRUE	NA	NA	NA	A	coding	460	1383	384	1766	30.0	-6	True	ATTAAA	-15
PB.6544.4	chr2	+	3781	1	novel_in_catalog	ZNF638	novel	871	5	NA	NA	0	-13298	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-22	True	TTTAAA	-11
PB.6544.5	chr2	+	2553	8	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	10	65072	8	4284	3prime_fragment	FALSE	canonical	1	110631	junction_1	111788.4692671925	NA	1	1	TRUE	NA	NA	NA	C	coding	749	2247	305	2551	65.0	-8	True	GATAAA	-31
PB.6544.6	chr2	+	4996	24	novel_in_catalog	ZNF638	novel	871	5	NA	NA	0	-49	combination_of_known_junctions	FALSE	canonical	1	156330	junction_1	90642.8150565514	NA	1	NA	TRUE	NA	NA	NA	C	coding	1562	4686	309	4994	60.0	-22	True	ACTAAA	-4
PB.6544.7	chr2	+	4138	24	novel_in_catalog	ZNF638	novel	871	5	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	11204	junction_21	178836.19288623202	NA	0	NA	TRUE	NA	NA	NA	C	coding	1100	3303	308	3610	30.0	-21	True	AATAAA	-19
PB.6544.8	chr2	+	3472	13	novel_in_catalog	ZNF638	novel	871	5	NA	NA	-5	17	combination_of_known_junctions	FALSE	canonical	1	31841	junction_10	153233.10178402762	NA	2	NA	TRUE	NA	NA	NA	C	coding	918	2757	302	3058	15.0	-5	True	NA	NA
PB.10897.4	chr7	-	3801	3	novel_not_in_catalog	AC099548.2	novel	571	5	NA	NA	-11	6922	any annotated donor/acceptor	FALSE	canonical	1	139	junction_1	3195.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	95	784	15.0	-4	True	NA	NA
PB.10897.1	chr7	-	3010	8	novel_not_in_catalog	TCAF2C	novel	2577	6	NA	NA	-189069	-280	any annotated donor/acceptor	FALSE	canonical	1	66	junction_1	2108.683707812017	NA	0	NA	TRUE	NA	NA	NA	A	coding	919	2760	91	2850	20.0	0	True	AAGAAA	-20
PB.2295.3	chr11	+	2462	6	full-splice_match	PAFAH1B2	ENST00000527958.5	4198	6	19	1717	2	1339	multi-exon	FALSE	canonical	1	370079	junction_1	150006.9844048603	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	141	830	35.0	-5	True	ATTAAA	-31
PB.10897.3	chr7	-	1919	2	full-splice_match	AC099548.2	ENST00000481651.1	2106	2	187	0	-38	0	multi-exon	FALSE	canonical	1	7266	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-31	False	NA	NA
PB.10897.2	chr7	-	2536	3	full-splice_match	AC099548.2	ENST00000494978.5	2517	3	-17	-2	-17	1	multi-exon	FALSE	canonical	1	84	junction_1	3222.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	101	880	0.0	-10	True	NA	NA
PB.8257.51	chr3	+	2446	9	novel_not_in_catalog	ST3GAL6	novel	804	5	NA	NA	83	-4	any annotated donor/acceptor	FALSE	canonical	1	100	junction_1	54284.14210415759	NA	5	1	TRUE	NA	NA	NA	C	coding	314	945	13	957	35.0	-5931	False	AATAAA	-20
PB.8257.50	chr3	+	5754	7	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	633	-4	no_combination_of_known_junctions	FALSE	canonical	1	5101	junction_5	59897.61321900342	NA	3	NA	TRUE	NA	NA	NA	C	coding	167	504	4456	4959	25.0	646	False	CATAAA	-45
PB.9357.9	chr5	+	3006	15	incomplete-splice_match	ERAP2	ENST00000437043.7	5705	19	559	9452	-2	-16	3prime_fragment	FALSE	canonical	1	69924	junction_1	45745.32893317177	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	171	2510	80.0	-2	True	NA	NA
PB.2295.2	chr11	+	3759	6	full-splice_match	PAFAH1B2	ENST00000527958.5	4198	6	17	422	0	-422	multi-exon	FALSE	canonical	1	370079	junction_1	150006.9844048603	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	143	832	100.0	-7	True	NA	NA
PB.79.13	chr1	-	3650	17	novel_in_catalog	CLSTN1	novel	5221	19	NA	NA	-2	-942	combination_of_known_junctions	FALSE	canonical	1	274110	junction_16	489929.5925551446	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2859	254	3112	30.0	-27	False	AATAAA	-30
PB.8809.5	chr4	-	1189	4	full-splice_match	JCHAIN	ENST00000543780.5	1406	4	68	149	-37	-149	multi-exon	FALSE	canonical	1	4596252	junction_3	47334.14410573219	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	74	553	25.0	0	True	AATAAA	-44
PB.9357.3	chr5	+	3045	19	novel_in_catalog	ERAP2	novel	5705	19	NA	NA	-1	-366	combination_of_known_junctions	FALSE	canonical	1	3622	junction_1	59566.51617776178	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2799	247	3045	55.0	1	True	NA	NA
PB.2295.5	chr11	+	4169	6	full-splice_match	PAFAH1B2	ENST00000527958.5	4198	6	24	5	-2	-5	multi-exon	FALSE	canonical	1	370079	junction_1	150006.9844048603	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	136	825	10.0	0	True	TATAAA	-17
PB.9357.1	chr5	+	3348	19	novel_in_catalog	ERAP2	novel	5705	19	NA	NA	18	-91	combination_of_known_junctions	FALSE	canonical	1	3622	junction_1	59566.51617776178	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	275	3139	45.0	-543	False	NA	NA
PB.8914.5	chr4	-	1852	9	novel_in_catalog	INTS12	novel	1927	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	4794	junction_6	127255.73895451386	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	361	1749	25.0	-24	True	AATAAA	-14
PB.9357.7	chr5	+	3079	14	incomplete-splice_match	ERAP2	ENST00000379904.8	3219	18	-27	7479	-21	173	3prime_fragment	FALSE	canonical	1	6376	junction_3	68388.14549952284	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	190	2394	85.0	-21	False	NA	NA
PB.9357.6	chr5	+	3230	18	novel_in_catalog	ERAP2	novel	5705	19	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	1336	junction_7	68501.22484884768	NA	1	NA	TRUE	NA	NA	NA	C	coding	910	2733	198	2930	100.0	-29	False	NA	NA
PB.9357.5	chr5	+	3222	15	incomplete-splice_match	ERAP2	ENST00000437043.7	5705	19	532	9263	-29	173	3prime_fragment	FALSE	canonical	1	69924	junction_1	45745.32893317177	NA	3	NA	TRUE	NA	NA	NA	C	coding	779	2340	198	2537	85.0	-29	False	NA	NA
PB.9357.4	chr5	+	3003	19	full-splice_match	ERAP2	ENST00000437043.7	5705	19	525	2177	-36	-366	multi-exon	FALSE	canonical	1	69924	junction_1	48164.5789465533	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2799	205	3003	55.0	-36	False	NA	NA
PB.10127.24	chr6	-	3328	4	full-splice_match	ASCC3	ENST00000369143.2	3433	4	-61	166	0	-166	multi-exon	FALSE	canonical	1	44348	junction_1	104076.89998052188	NA	5	NA	TRUE	NA	NA	NA	C	coding	111	336	354	689	50.0	-44	True	AATAAA	-19
PB.10127.25	chr6	-	1762	4	full-splice_match	ASCC3	ENST00000369143.2	3433	4	-80	1751	-19	-1751	multi-exon	FALSE	canonical	1	44348	junction_1	104076.89998052188	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	373	708	60.0	-63	True	NA	NA
PB.487.17	chr1	-	2095	20	novel_in_catalog	FUBP1	novel	612	5	NA	NA	9	-271	combination_of_known_junctions	FALSE	canonical	1	785899	junction_16	232448.80034397208	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	74	2005	20.0	-14	True	AATATA	-28
PB.10127.20	chr6	-	2316	11	novel_not_in_catalog	ASCC3	novel	8146	42	NA	NA	2	-47822	any annotated donor/acceptor	FALSE	canonical	1	1197	junction_1	99197.60668529256	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	328	2079	10.0	-18	True	ATTAAA	-19
PB.10127.21	chr6	-	1950	9	incomplete-splice_match	ASCC3	ENST00000522650.5	2828	13	-27	52033	-19	-52033	3prime_fragment	FALSE	canonical	1	181569	junction_4	65348.18820939108	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1578	373	1950	55.0	-63	True	NA	NA
PB.10127.22	chr6	-	3218	4	full-splice_match	ASCC3	ENST00000369143.2	3433	4	214	1	204	-1	multi-exon	FALSE	canonical	1	44348	junction_1	104076.89998052188	NA	3	NA	TRUE	NA	NA	NA	C	coding	111	336	79	414	20.0	231	False	NA	NA
PB.10127.23	chr6	-	3685	4	novel_not_in_catalog	ASCC3	novel	8146	42	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	6296	junction_1	121979.30026670736	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-16	True	NA	NA
PB.4797.1	chr17	+	3276	18	incomplete-splice_match	MPRIP	ENST00000395811.9	10960	23	93456	7094	-122	0	5prime_fragment	FALSE	canonical	1	749	junction_12	175190.8849508292	NA	2	NA	TRUE	NA	NA	NA	B	coding	831	2496	121	2616	25.0	-1860	False	ATTAAA	-7
PB.1393.4	chr10	-	5358	8	novel_in_catalog	MARCH8	novel	5638	8	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	21984	junction_7	117463.81217990813	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	844	1713	35.0	6	True	AATAAA	-10
PB.4797.6	chr17	+	2246	11	incomplete-splice_match	MPRIP	ENST00000341712.8	3846	24	115705	3	57	3	5prime_fragment	FALSE	canonical	1	749	junction_4	263632.30904062197	NA	0	NA	TRUE	NA	NA	NA	B	coding	428	1287	195	1481	15.0	6759	False	ATTAAA	-10
PB.4797.7	chr17	+	3323	9	incomplete-splice_match	MPRIP	ENST00000313485.10	6050	11	7711	5	652	1	5prime_fragment	FALSE	canonical	1	749	junction_3	209623.23174533728	NA	0	NA	TRUE	NA	NA	NA	B	coding	833	2502	161	2662	20.0	-6474	False	ATTAAA	-8
PB.11345.4	chr8	+	3963	23	full-splice_match	EFR3A	ENST00000254624.9	5438	23	-2	1477	-2	1019	multi-exon	FALSE	canonical	1	195311	junction_1	114238.26304478578	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	228	2693	55.0	-7	True	TATAAA	-44
PB.11345.5	chr8	+	4987	23	full-splice_match	EFR3A	ENST00000254624.9	5438	23	14	437	-7	-437	multi-exon	FALSE	canonical	1	195311	junction_1	114238.26304478578	NA	1	NA	TRUE	NA	NA	NA	C	coding	821	2466	212	2677	35.0	9	True	AATAAA	-36
PB.11345.6	chr8	+	5380	24	novel_not_in_catalog	EFR3A	novel	5438	23	NA	NA	10	-121	any annotated donor/acceptor	FALSE	canonical	1	140	junction_2	160520.07230787058	NA	1	1	TRUE	NA	NA	NA	C	coding	785	2358	397	2754	40.0	5	True	AATAAA	-17
PB.4811.1	chr17	+	2520	4	full-splice_match	MIEF2	ENST00000323019.8	3364	4	83	761	1	10	multi-exon	FALSE	canonical	1	84348	junction_3	22842.224074434318	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	129	1493	20.0	-45	True	AATAAA	-37
PB.11345.1	chr8	+	3328	23	full-splice_match	EFR3A	ENST00000254624.9	5438	23	-13	2123	-13	373	multi-exon	TRUE	canonical	1	195311	junction_1	114238.26304478578	NA	1	NA	TRUE	NA	NA	NA	C	coding	821	2466	239	2704	20.0	-18	True	AATATA	-21
PB.11345.2	chr8	+	1788	14	incomplete-splice_match	EFR3A	ENST00000254624.9	5438	23	6	34227	6	-21541	3prime_fragment	FALSE	canonical	1	195311	junction_1	109097.90398807722	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1569	220	1788	45.0	1	True	GATAAA	-38
PB.4811.2	chr17	+	3257	4	full-splice_match	MIEF2	ENST00000323019.8	3364	4	69	38	-1	-38	multi-exon	FALSE	canonical	1	84348	junction_3	22842.224074434318	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	143	1507	80.0	-59	True	NA	NA
PB.10575.4	chr7	-	1838	5	incomplete-splice_match	AC006001.3	ENST00000649635.1	2602	9	-18	23042	5	-81	3prime_fragment	FALSE	canonical	1	18635	junction_1	33898.48319154561	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	4	True	TATAAA	-25
PB.10575.5	chr7	-	1677	4	novel_in_catalog	AC006001.3	novel	1819	6	NA	NA	-5	-85	combination_of_known_junctions	FALSE	canonical	1	18635	junction_1	38034.50984157531	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-17	True	TATAAA	-21
PB.10575.6	chr7	-	1538	3	incomplete-splice_match	AC006001.3	ENST00000639011.1	1819	6	23	23276	0	-88	3prime_fragment	FALSE	canonical	1	99535	junction_2	21382.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-21	True	TATAAA	-18
PB.10575.7	chr7	-	1758	4	novel_in_catalog	AC006001.3	novel	1819	6	NA	NA	-13	-90	no_combination_of_known_junctions	FALSE	canonical	1	15431	junction_3	52864.84567902063	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-25	False	TATAAA	-16
PB.11345.8	chr8	+	5421	23	full-splice_match	EFR3A	ENST00000254624.9	5438	23	12	5	-9	-5	multi-exon	FALSE	canonical	1	195311	junction_1	114238.26304478578	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	214	2679	35.0	7	True	NA	NA
PB.10575.1	chr7	-	1985	4	novel_in_catalog	AC006001.3	novel	1819	6	NA	NA	2	160	combination_of_known_junctions	FALSE	canonical	1	37270	junction_3	43221.713557989446	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	1	True	ATTAAA	-25
PB.10575.2	chr7	-	1917	4	novel_in_catalog	AC006001.3	novel	1819	6	NA	NA	0	160	combination_of_known_junctions	FALSE	canonical	1	18635	junction_1	38034.50984157531	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-12	True	ATTAAA	-25
PB.10575.3	chr7	-	2096	5	incomplete-splice_match	AC006001.3	ENST00000649635.1	2602	9	-36	22802	-2	159	3prime_fragment	FALSE	canonical	1	18635	junction_1	33898.48319154561	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-14	True	ATTAAA	-24
PB.11357.12	chr8	-	4859	33	novel_in_catalog	PTK2	novel	4955	32	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	6733	junction_32	154056.32712663896	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	640	3798	30.0	-1	True	ATTAAA	-15
PB.3489.1	chr14	+	2104	1	full-splice_match	AL136038.3	ENST00000561909.1	1096	1	42	-1050	42	1050	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	NA	False	NA	NA
PB.7306.12	chr20	-	2716	11	novel_in_catalog	SERINC3	novel	812	5	NA	NA	0	-1777	combination_of_known_junctions	FALSE	canonical	1	5178	junction_10	531899.8068935634	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	372	1628	30.0	-6	True	AATAAA	-15
PB.9177.7	chr5	-	2126	14	incomplete-splice_match	LMBRD2	ENST00000296603.4	8185	18	74	12750	74	-2640	3prime_fragment	FALSE	canonical	1	68398	junction_13	22667.81436597224	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1737	390	2126	40.0	-1	True	AATGAA	-16
PB.9177.6	chr5	-	3257	18	full-splice_match	LMBRD2	ENST00000296603.4	8185	18	28	4900	28	-4900	multi-exon	FALSE	canonical	1	68398	junction_17	21251.107821479294	NA	1	NA	TRUE	NA	NA	NA	C	coding	695	2088	436	2523	35.0	-1	True	TATAAA	-16
PB.9177.5	chr5	-	3586	18	full-splice_match	LMBRD2	ENST00000296603.4	8185	18	48	4551	48	-4551	multi-exon	FALSE	canonical	1	68398	junction_17	21251.107821479294	NA	1	NA	TRUE	NA	NA	NA	C	coding	695	2088	416	2503	30.0	19	False	GATAAA	-18
PB.9177.4	chr5	-	5327	18	full-splice_match	LMBRD2	ENST00000296603.4	8185	18	53	2805	53	-2805	multi-exon	FALSE	canonical	1	68398	junction_17	21251.107821479294	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	411	2498	80.0	-22	True	CATAAA	-29
PB.9177.3	chr5	-	7990	18	full-splice_match	LMBRD2	ENST00000296603.4	8185	18	49	146	49	-146	multi-exon	FALSE	canonical	1	68398	junction_17	21251.107821479294	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	415	2502	35.0	20	False	AATAAA	-18
PB.9177.1	chr5	-	8111	18	full-splice_match	LMBRD2	ENST00000296603.4	8185	18	78	-4	78	4	multi-exon	FALSE	canonical	1	68398	junction_17	21251.107821479294	NA	10	NA	TRUE	NA	NA	NA	C	coding	695	2088	386	2473	25.0	3	True	AATAAA	-25
PB.7946.1	chr3	-	4173	14	novel_in_catalog	IQSEC1	novel	5279	14	NA	NA	73	-46	combination_of_known_junctions	FALSE	canonical	1	29987	junction_13	125930.49085486305	NA	0	NA	TRUE	NA	NA	NA	B	coding	1129	3390	424	3813	60.0	45	False	NA	NA
PB.467.8	chr1	-	4291	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1446	-73	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	319261.95237610134	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	1809	False	ATTAAA	-19
PB.7946.2	chr3	-	4041	13	novel_in_catalog	IQSEC1	novel	5279	14	NA	NA	155	-46	combination_of_known_junctions	FALSE	canonical	1	29987	junction_12	119265.2347294734	NA	1	NA	TRUE	NA	NA	NA	B	coding	937	2814	342	3155	60.0	3	True	NA	NA
PB.1028.6	chr1	+	4688	16	incomplete-splice_match	CAMSAP2	ENST00000358823.6	7352	17	14	2979	14	1	3prime_fragment	FALSE	canonical	1	146532	junction_5	87326.93207822864	NA	1	NA	TRUE	NA	NA	NA	C	coding	1382	4149	257	4405	10.0	-33	True	AATAAA	-20
PB.1028.7	chr1	+	3884	11	incomplete-splice_match	CAMSAP2	ENST00000358823.6	7352	17	53	10268	53	-2979	3prime_fragment	FALSE	canonical	1	146532	junction_5	24784.763807831616	NA	3	1	TRUE	NA	NA	NA	C	coding	1156	3471	218	3688	20.0	6	True	AATAAA	-13
PB.1028.4	chr1	+	2725	11	incomplete-splice_match	CAMSAP2	ENST00000358823.6	7352	17	-2	11482	-2	-4193	3prime_fragment	FALSE	canonical	1	146532	junction_5	24784.763807831616	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2451	273	2723	70.0	-49	True	NA	NA
PB.1028.5	chr1	+	6408	17	full-splice_match	CAMSAP2	ENST00000358823.6	7352	17	8	936	8	-933	multi-exon	FALSE	canonical	1	146532	junction_5	86430.48335329146	NA	3	NA	TRUE	NA	NA	NA	C	coding	1478	4437	263	4699	25.0	-39	True	ATTAAA	-21
PB.1028.2	chr1	+	7359	17	full-splice_match	CAMSAP2	ENST00000358823.6	7352	17	-5	-2	-5	2	multi-exon	FALSE	canonical	1	146532	junction_5	86430.48335329146	NA	2	NA	TRUE	NA	NA	NA	C	coding	1478	4437	276	4712	10.0	-52	True	AATAAA	-17
PB.1028.3	chr1	+	4959	17	full-splice_match	CAMSAP2	ENST00000413307.6	4498	17	-226	-235	-5	235	multi-exon	TRUE	canonical	1	44314	junction_8	98450.91043587329	NA	1	NA	TRUE	NA	NA	NA	C	coding	1462	4389	276	4664	30.0	-52	True	ATTAAA	-17
PB.1028.1	chr1	+	4030	1	genic	CAMSAP2	novel	NA	NA	NA	NA	-6	-89253	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-53	True	NA	NA
PB.8914.6	chr4	-	1700	8	full-splice_match	INTS12	ENST00000340139.9	1710	8	7	3	7	0	multi-exon	FALSE	canonical	1	23813	junction_7	106200.32153800434	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	209	1597	25.0	-10	True	AATAAA	-14
PB.10102.16	chr6	-	2713	17	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	-55	619	any annotated donor/acceptor	FALSE	canonical	1	310	junction_5	56980.60689611861	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	208	1545	30.0	1	True	AGTAAA	-15
PB.5159.10	chr17	-	2087	13	full-splice_match	APPBP2	ENST00000083182.7	6478	13	260	4131	-21	466	multi-exon	FALSE	canonical	1	167699	junction_11	64845.62831849834	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	29	1786	65.0	-22	True	TTTAAA	-24
PB.4918.1	chr17	+	1805	1	novel_in_catalog	CCL4L2	novel	954	3	NA	NA	2	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-17
PB.916.11	chr1	+	3319	8	full-splice_match	SFT2D2	ENST00000271375.6	11040	8	10	7711	10	2174	multi-exon	FALSE	canonical	1	179273	junction_1	37958.57644263047	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	63	545	60.0	14	True	NA	NA
PB.916.12	chr1	+	3129	15	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	12	60890	any annotated donor/acceptor	FALSE	canonical	1	7069	junction_8	107194.48199950806	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	1077	2216	85.0	16	True	NA	NA
PB.916.13	chr1	+	4109	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	23	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	2	NA	TRUE	NA	NA	NA	C	coding	160	483	50	532	30.0	27	True	AATAAA	-20
PB.916.14	chr1	+	2243	2	novel_not_in_catalog	SFT2D2	novel	11040	8	NA	NA	20050	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	473	False	AATAAA	-20
PB.916.16	chr1	+	3274	2	novel_not_in_catalog	SFT2D2	novel	11040	8	NA	NA	22007	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2430	False	AATAAA	-20
PB.916.17	chr1	+	2121	1	genic	SFT2D2	novel	NA	NA	NA	NA	24900	3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	5323	False	AATAAA	-29
PB.11359.3	chr8	+	2843	6	full-splice_match	PTP4A3	ENST00000521578.5	1717	6	32	-1158	4	-2	multi-exon	FALSE	canonical	1	45178	junction_1	181740.3930346801	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	914	1435	20.0	4	True	AGTAAA	-19
PB.1698.1	chr10	+	3595	7	incomplete-splice_match	BUB3	ENST00000368858.9	1361	8	-18	2	-5	-2	intron_retention	FALSE	canonical	1	799250	junction_3	512041.0788588321	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	90	1064	25.0	-5	True	AATAAA	-19
PB.11359.1	chr8	+	1844	6	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	1	2	intron_retention	FALSE	canonical	1	27126	junction_2	213177.9540708654	NA	2	1	TRUE	NA	NA	NA	C	coding	149	450	917	1366	10.0	1	True	AATAAA	-15
PB.11359.7	chr8	+	2893	6	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	-3479	-2	intron_retention	FALSE	canonical	1	50556	junction_1	179624.8360807603	NA	3	1	TRUE	NA	NA	NA	C	coding	173	522	964	1485	20.0	0	True	AGTAAA	-19
PB.11359.6	chr8	+	2002	6	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	-3507	0	intron_retention	FALSE	canonical	1	12985	junction_1	194420.58836203537	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	1005	1526	5.0	-3505	False	AATAAA	-13
PB.11359.5	chr8	+	2040	6	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	-3552	6	intron_retention	FALSE	canonical	1	50556	junction_1	179624.8360807603	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	1037	1558	15.0	-3550	False	AATAAA	-19
PB.11359.4	chr8	+	2089	7	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	11	0	intron_retention	FALSE	canonical	1	1003	junction_1	232558.45980198664	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	1092	1613	5.0	11	True	AATAAA	-13
PB.7995.1	chr3	-	3655	12	full-splice_match	OSBPL10	ENST00000396556.6	6600	12	9	2936	7	846	multi-exon	FALSE	canonical	1	97036	junction_11	26205.762979205814	NA	2	NA	TRUE	NA	NA	NA	A	coding	764	2295	115	2409	15.0	342	False	AATATA	-15
PB.9863.9	chr6	+	2849	4	full-splice_match	TCF19	ENST00000376257.7	3290	4	4	437	-1	-437	multi-exon	FALSE	canonical	1	95006	junction_1	94680.6717586365	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	751	1788	30.0	-43	True	AATAAA	-24
PB.11359.8	chr8	+	1889	6	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	-3479	0	intron_retention	FALSE	canonical	1	27126	junction_2	211913.93320591265	NA	2	NA	TRUE	NA	NA	NA	C	coding	149	450	964	1413	5.0	0	True	AATAAA	-13
PB.10690.1	chr7	+	948	2	full-splice_match	SDHAF3	ENST00000432641.2	2060	2	1110	2	-1	-2	multi-exon	FALSE	canonical	1	466766	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	125	378	25	402	20.0	-7	True	AATAAA	-14
PB.3150.1	chr13	+	2189	1	novel_in_catalog	CPB2-AS1	novel	565	3	NA	NA	-16	-41457	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.1698.2	chr10	+	1317	8	full-splice_match	BUB3	ENST00000368865.8	7828	8	61	6450	61	776	multi-exon	TRUE	canonical	1	799250	junction_3	548304.5224230336	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	149	1135	15.0	-662	False	AATAAA	-17
PB.3366.11	chr14	+	2961	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	35	2808	0	583	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	120	2240	70.0	0	True	NA	NA
PB.41.2	chr1	+	2864	14	full-splice_match	TP73	ENST00000378295.8	5188	14	26	2298	-19	536	multi-exon	FALSE	canonical	1	15365	junction_1	9948.948747058535	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	130	2040	15.0	1	True	GATAAA	-15
PB.11728.2	chr9	+	3257	1	incomplete-splice_match	SNX30	ENST00000374232.7	7622	9	120892	1	15022	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	9288	False	AATAAA	-22
PB.11728.1	chr9	+	4537	1	novel_in_catalog	SNX30	novel	4068	6	NA	NA	13748	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	8014	False	AATAAA	-28
PB.3366.10	chr14	+	3899	14	full-splice_match	G2E3	ENST00000438909.6	2334	14	0	-1565	0	2	multi-exon	FALSE	canonical	1	15470	junction_1	46787.321100774534	NA	3	1	TRUE	NA	NA	NA	C	coding	660	1983	217	2199	10.0	0	True	ATTAAA	-18
PB.8224.13	chr3	+	1705	9	novel_not_in_catalog	MITF	novel	4814	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1923	junction_8	41285.998370361594	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	132	980	90.0	0	True	NA	NA
PB.929.1	chr1	+	2928	3	full-splice_match	PRRX1	ENST00000497230.2	3501	3	270	303	270	-303	multi-exon	FALSE	canonical	1	229454	junction_1	25285.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	13	615	30.0	-120	False	AAAACA	-33
PB.3366.13	chr14	+	2399	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	36	3369	-1	22	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	119	2239	35.0	1	True	AATAAA	-43
PB.3724.19	chr15	+	3260	8	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	636	1718	25.0	-25	True	AATAAA	-26
PB.3724.18	chr15	+	2827	8	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	2	11	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	865	1947	35.0	-27	True	AATAAA	-20
PB.3724.17	chr15	+	2466	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	517	1599	40.0	-28	True	AATAAA	-7
PB.3724.16	chr15	+	2811	8	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	360	1083	857	1939	35.0	-28	True	AATAAA	-12
PB.3724.15	chr15	+	2684	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	0	210	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	coding	274	825	781	1605	25.0	-29	True	NA	NA
PB.3724.14	chr15	+	1961	7	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	0	372	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	525	1520	20.0	-31	True	AATACA	-26
PB.3724.13	chr15	+	1994	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	0	394	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	449	1531	20.0	0	True	NA	NA
PB.3724.12	chr15	+	3012	6	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	0	9	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	384	1466	25.0	-31	True	AATAAA	-30
PB.3724.11	chr15	+	2550	6	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-4	211	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	388	1470	25.0	-35	True	NA	NA
PB.3724.10	chr15	+	2401	6	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	504	1529	35.0	-41	True	AATAAA	-12
PB.3177.1	chr13	+	3598	8	incomplete-splice_match	WDFY2	ENST00000298125.6	9321	12	-72	13777	-19	807	3prime_fragment	FALSE	canonical	1	110325	junction_1	29311.450051514832	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	253	1164	75.0	-54	False	NA	NA
PB.10885.5	chr7	-	2859	9	novel_in_catalog	MKRN1	novel	3151	8	NA	NA	-19	-26	combination_of_known_junctions	FALSE	canonical	1	3467	junction_7	216503.27287306768	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	159	1415	80.0	303	False	NA	NA
PB.3177.3	chr13	+	3712	12	full-splice_match	WDFY2	ENST00000298125.6	9321	12	-63	5672	-10	-5672	multi-exon	FALSE	canonical	1	110325	junction_1	34888.60173336115	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	244	1446	20.0	-17	True	ATTAAA	-18
PB.3177.2	chr13	+	2124	12	full-splice_match	WDFY2	ENST00000298125.6	9321	12	-57	7254	-4	-7254	multi-exon	FALSE	canonical	1	110325	junction_1	34888.60173336115	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	238	1440	60.0	-11	True	NA	NA
PB.3177.5	chr13	+	2784	12	full-splice_match	WDFY2	ENST00000298125.6	9321	12	-46	6583	7	-6583	multi-exon	FALSE	canonical	1	110325	junction_1	34888.60173336115	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	227	1429	25.0	0	True	TTTAAA	-42
PB.3177.4	chr13	+	8470	12	full-splice_match	WDFY2	ENST00000298125.6	9321	12	-63	914	-10	-914	multi-exon	FALSE	canonical	1	110325	junction_1	34888.60173336115	NA	3	NA	TRUE	NA	NA	NA	C	coding	400	1203	244	1446	15.0	-17	True	AATAAA	-17
PB.10885.2	chr7	-	3484	7	full-splice_match	MKRN1	ENST00000475010.5	3467	7	-43	26	-11	-26	multi-exon	FALSE	canonical	1	313508	junction_5	81387.9268599192	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	36	1274	80.0	125	False	NA	NA
PB.3177.6	chr13	+	1672	12	full-splice_match	WDFY2	ENST00000298125.6	9321	12	-46	7695	7	6889	multi-exon	FALSE	canonical	1	110325	junction_1	34888.60173336115	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	227	1429	5.0	0	True	TATAAA	-35
PB.10885.8	chr7	-	2813	7	novel_not_in_catalog	MKRN1	novel	3151	8	NA	NA	-14	-26	any annotated donor/acceptor	FALSE	canonical	1	31	junction_2	194907.44432058858	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	39	1301	80.0	122	False	NA	NA
PB.10885.9	chr7	-	2807	7	novel_in_catalog	MKRN1	novel	3151	8	NA	NA	-19	-26	no_combination_of_known_junctions	FALSE	canonical	1	6572	junction_6	194025.80164045765	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	44	1363	80.0	117	False	NA	NA
PB.9648.3	chr5	-	2728	15	novel_not_in_catalog	DBN1	novel	2995	14	NA	NA	-16	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	417617.72564917273	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	133	2082	0.0	-28	True	AATAAA	-15
PB.1697.2	chr10	+	2536	1	genic	HMX2	novel	NA	NA	NA	NA	-18	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	1706	2020	90.0	-6896	False	NA	NA
PB.8224.15	chr3	+	1694	8	incomplete-splice_match	MITF	ENST00000314557.10	1798	9	1149	21	907	0	5prime_fragment	FALSE	canonical	1	93189	junction_1	15056.806026321974	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	276	1295	90.0	0	True	NA	NA
PB.9648.1	chr5	-	2795	14	full-splice_match	DBN1	ENST00000309007.9	2995	14	196	4	68	-4	multi-exon	FALSE	canonical	1	710044	junction_13	262523.17527381494	NA	8	NA	TRUE	NA	NA	NA	C	coding	649	1950	25	1974	0.0	9934	False	AATAAA	-15
PB.10001.8	chr6	-	3899	10	full-splice_match	ZNF318	ENST00000361428.2	8006	10	-79	4186	-44	-4186	multi-exon	FALSE	canonical	1	52842	junction_9	47138.678272560326	NA	0	NA	TRUE	NA	NA	NA	C	coding	1247	3741	158	3898	55.0	37	True	AAAAAG	-4
PB.10001.9	chr6	-	4111	9	novel_in_catalog	ZNF318	novel	3836	10	NA	NA	49	-4310	intron_retention	FALSE	canonical	1	52842	junction_8	49239.658283332705	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	30	3428	60.0	3	True	NA	NA
PB.1697.1	chr10	+	1613	2	full-splice_match	HMX2	ENST00000339992.3	1628	2	-18	33	-18	-33	multi-exon	FALSE	canonical	1	11470	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	276	1097	90.0	-6896	False	NA	NA
PB.7081.10	chr2	-	2401	8	novel_in_catalog	HJURP	novel	823	3	NA	NA	13	-680	no_combination_of_known_junctions	FALSE	canonical	1	1287	junction_3	113301.89186272869	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	75	2207	15.0	-19	True	AATAAA	-14
PB.10001.1	chr6	-	3767	8	incomplete-splice_match	ZNF318	ENST00000605935.5	3836	10	-15	20357	-15	-1	3prime_fragment	FALSE	canonical	1	30945	junction_1	69562.46263786884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	129	3482	20.0	-13	True	AATAAA	-19
PB.9373.1	chr5	-	4059	6	novel_in_catalog	NUDT12	novel	3492	7	NA	NA	3	0	intron_retention	FALSE	canonical	1	100465	junction_5	18264.147093143987	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	1424	2053	0.0	2	True	ATTAAA	-14
PB.10001.6	chr6	-	8043	10	full-splice_match	ZNF318	ENST00000361428.2	8006	10	-38	1	-3	-1	multi-exon	FALSE	canonical	1	52842	junction_9	47138.678272560326	NA	1	NA	TRUE	NA	NA	NA	C	coding	2279	6840	117	6956	10.0	-1	True	AATAAA	-13
PB.10001.7	chr6	-	7180	10	full-splice_match	ZNF318	ENST00000361428.2	8006	10	47	779	47	-779	multi-exon	FALSE	canonical	1	52842	junction_9	47138.678272560326	NA	1	NA	TRUE	NA	NA	NA	C	coding	2279	6840	32	6871	25.0	1	True	ATTAAA	-21
PB.11794.5	chr9	+	2957	3	full-splice_match	ZBTB43	ENST00000373464.4	5965	3	17	2991	-1	-1884	multi-exon	FALSE	canonical	1	70184	junction_1	8391.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	248	1651	85.0	-8	True	GATAAA	-41
PB.8033.1	chr3	+	604	3	incomplete-splice_match	EIF1B	ENST00000232905.3	1010	4	1324	2	380	-2	5prime_fragment	FALSE	canonical	1	1650845	junction_1	99472.5	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	125	False	AGTAAA	-21
PB.7306.11	chr20	-	3930	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-5	-1777	any annotated donor/acceptor	FALSE	canonical	1	16545	junction_2	450054.38779132266	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	140	1240	30.0	-42	True	AATAAA	-15
PB.467.7	chr1	-	4382	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	0	-73	any annotated donor/acceptor	FALSE	canonical	1	849	junction_2	289918.110052218	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	ATTAAA	-19
PB.2033.9	chr11	-	2467	5	full-splice_match	EHD1	ENST00000320631.7	4551	5	96	1988	-82	662	multi-exon	FALSE	canonical	1	715496	junction_2	110818.81347496914	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	160	1764	35.0	-3	True	AATACA	-20
PB.4080.7	chr15	+	4071	21	incomplete-splice_match	BLM	ENST00000648453.1	4522	23	-5	4028	-5	-13	3prime_fragment	FALSE	canonical	1	53827	junction_1	33402.36202617265	NA	1	NA	TRUE	NA	NA	NA	C	coding	1328	3984	88	4071	65.0	-5	True	NA	NA
PB.4080.6	chr15	+	1625	7	incomplete-splice_match	BLM	ENST00000648453.1	4522	23	-8	54434	-8	86	3prime_fragment	FALSE	canonical	1	53827	junction_1	20173.22855020705	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1533	91	1623	60.0	-8	True	NA	NA
PB.4080.5	chr15	+	4299	21	novel_in_catalog	BLM	novel	5258	22	NA	NA	-8	6	combination_of_known_junctions	FALSE	canonical	1	3582	junction_5	44049.1825475797	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	1272	4211	20.0	-8	True	TATAAA	-21
PB.4080.4	chr15	+	5233	22	full-splice_match	BLM	ENST00000355112.7	5258	22	19	6	-17	-6	multi-exon	FALSE	canonical	1	53827	junction_1	35092.41539020031	NA	1	NA	TRUE	NA	NA	NA	C	coding	1417	4254	100	4353	40.0	-17	True	NA	NA
PB.3828.8	chr15	+	2426	13	novel_in_catalog	WDR76	novel	3978	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	8781	junction_1	65594.9804962663	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	112	1800	30.0	-6	True	ATTAAA	-20
PB.4080.2	chr15	+	3703	19	incomplete-splice_match	BLM	ENST00000648453.1	4522	23	-27	11140	9	-7125	3prime_fragment	FALSE	canonical	1	53827	junction_1	32237.232124699054	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3594	110	3703	60.0	-27	True	CATAAA	-38
PB.4080.1	chr15	+	4521	23	novel_not_in_catalog	BLM	novel	5258	22	NA	NA	13	6	any annotated donor/acceptor	FALSE	canonical	1	7422	junction_1	46048.70209762739	NA	1	NA	TRUE	NA	NA	NA	C	coding	1417	4254	180	4433	20.0	13	True	TATAAA	-21
PB.5856.2	chr19	-	1795	12	full-splice_match	TMEM161A	ENST00000162044.13	1820	12	20	5	-1	-5	multi-exon	FALSE	canonical	1	176968	junction_10	102053.71544825494	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	46	1485	25.0	4	True	AATAAA	-20
PB.3828.4	chr15	+	3952	13	full-splice_match	WDR76	ENST00000263795.10	3978	13	25	1	0	-1	multi-exon	FALSE	canonical	1	169336	junction_9	28468.45496956529	NA	2	NA	TRUE	NA	NA	NA	C	coding	626	1881	46	1926	5.0	-22	True	AATAAA	-22
PB.3167.3	chr13	-	4001	13	full-splice_match	RCBTB1	ENST00000378302.6	4033	13	24	8	24	-8	multi-exon	FALSE	canonical	1	74894	junction_11	49258.645790118804	NA	3	NA	TRUE	NA	NA	NA	C	coding	531	1596	238	1833	45.0	-9	True	AATAAA	-13
PB.3828.6	chr15	+	3959	13	full-splice_match	WDR76	ENST00000381246.6	2586	13	22	-1395	14	-6	multi-exon	FALSE	canonical	1	14319	junction_1	64203.251640568975	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	250	1938	10.0	-8	True	AATAAA	-17
PB.3828.7	chr15	+	2536	13	full-splice_match	WDR76	ENST00000263795.10	3978	13	39	1403	14	-2	multi-exon	FALSE	canonical	1	169336	junction_9	28468.45496956529	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	32	1912	30.0	-8	True	ATTAAA	-18
PB.8313.6	chr3	-	3366	7	full-splice_match	IGSF11	ENST00000491903.1	1487	7	-122	-1757	38	0	multi-exon	FALSE	canonical	1	2043	junction_2	10039.700954211734	NA	7	NA	TRUE	NA	NA	NA	C	coding	403	1212	269	1480	45.0	-5	True	AATAAA	-14
PB.3828.1	chr15	+	2969	13	full-splice_match	WDR76	ENST00000263795.10	3978	13	18	991	1	410	multi-exon	FALSE	canonical	1	169336	junction_9	28468.45496956529	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	53	1933	75.0	-29	True	NA	NA
PB.3828.2	chr15	+	2399	12	novel_in_catalog	WDR76	novel	3978	13	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	1837	junction_8	69544.68370434357	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	53	1774	25.0	-29	True	ATTAAA	-19
PB.3828.3	chr15	+	2991	13	full-splice_match	WDR76	ENST00000381246.6	2586	13	4	-409	-4	409	multi-exon	FALSE	canonical	1	14319	junction_1	64203.251640568975	NA	11	2	TRUE	NA	NA	NA	C	coding	562	1689	268	1956	70.0	-26	True	NA	NA
PB.3969.8	chr15	+	3100	6	novel_not_in_catalog	PML	novel	2199	8	NA	NA	-1	-239	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	186699.57001621617	NA	3	NA	TRUE	NA	NA	NA	C	coding	420	1263	98	1360	55.0	0	True	AATAAA	-17
PB.3969.9	chr15	+	3058	8	novel_in_catalog	PML	novel	2199	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	38129	junction_7	129403.2367068308	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	98	1819	20.0	0	True	NA	NA
PB.7658.9	chr22	+	2557	10	novel_in_catalog	CABIN1	novel	7222	37	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	2641	junction_1	182704.2091788099	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	56	2125	5.0	-3	True	AATAAA	-13
PB.7658.8	chr22	+	2485	9	novel_in_catalog	CABIN1	novel	7222	37	NA	NA	101	-1	combination_of_known_junctions	FALSE	canonical	1	40823	junction_1	151465.05545814024	NA	5	NA	TRUE	NA	NA	NA	C	coding	645	1938	118	2055	0.0	0	True	AATAAA	-11
PB.3969.4	chr15	+	4377	8	full-splice_match	PML	ENST00000565898.5	5393	8	-23	1039	-11	2	multi-exon	FALSE	canonical	1	71309	junction_7	132115.86495024367	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	108	2612	30.0	-10	True	AATAAA	-19
PB.3969.5	chr15	+	2895	7	full-splice_match	PML	ENST00000354026.10	2885	7	-11	1	-11	0	multi-exon	FALSE	canonical	1	126287	junction_6	127871.56754163749	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	108	2453	20.0	-10	True	NA	NA
PB.3969.6	chr15	+	2030	7	full-splice_match	PML	ENST00000564428.5	1985	7	-38	-7	-11	3	multi-exon	FALSE	canonical	1	136428	junction_4	119200.45078738866	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	108	1865	20.0	-10	True	AATAAA	-21
PB.3969.7	chr15	+	3670	7	full-splice_match	PML	ENST00000435786.6	3643	7	-28	1	-1	0	multi-exon	FALSE	canonical	1	176646	junction_1	95669.0188491319	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1836	98	1933	20.0	0	True	NA	NA
PB.7658.3	chr22	+	7084	36	novel_in_catalog	CABIN1	novel	1321	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	25407	junction_4	103149.51502213291	NA	18	4	TRUE	NA	NA	NA	C	coding	2175	6528	128	6655	0.0	11	True	AATAAA	-10
PB.3969.1	chr15	+	3897	5	novel_not_in_catalog	PML	novel	2199	8	NA	NA	-12	-236	any annotated donor/acceptor	FALSE	canonical	1	13021	junction_4	173751.85108798122	NA	3	NA	TRUE	NA	NA	NA	C	coding	420	1263	23	1285	55.0	0	True	AATAAA	-20
PB.3969.2	chr15	+	4522	9	full-splice_match	PML	ENST00000268058.7	4508	9	-17	3	-17	-3	multi-exon	TRUE	canonical	1	71309	junction_8	117636.2367485435	NA	2	NA	TRUE	NA	NA	NA	C	coding	882	2649	114	2762	35.0	-16	True	AATAAA	-14
PB.3969.3	chr15	+	2173	8	full-splice_match	PML	ENST00000395135.7	2199	8	32	-6	-12	1	multi-exon	FALSE	canonical	1	176646	junction_1	99361.05145007929	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	109	2010	20.0	-11	True	AATAAA	-19
PB.9863.4	chr6	+	2230	3	incomplete-splice_match	TCF19	ENST00000376255.4	3039	4	792	437	792	-437	5prime_fragment	FALSE	canonical	1	274497	junction_1	18722.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	132	1169	30.0	750	False	AATAAA	-24
PB.4313.1	chr16	-	4107	13	full-splice_match	PALB2	ENST00000261584.8	4003	13	-96	-8	-96	-2	multi-exon	TRUE	canonical	1	52887	junction_12	27015.874558997715	NA	1	NA	TRUE	NA	NA	NA	C	coding	1186	3561	250	3810	10.0	-148	False	AATAAA	-20
PB.4313.2	chr16	-	3869	12	novel_in_catalog	PALB2	novel	626	3	NA	NA	-7	-2	combination_of_known_junctions	TRUE	canonical	1	13322	junction_1	39415.7675533305	NA	0	NA	TRUE	NA	NA	NA	C	coding	1071	3216	161	3376	10.0	-59	True	AATAAA	-20
PB.4313.3	chr16	-	4126	14	novel_in_catalog	PALB2	novel	626	3	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	4092	junction_13	44612.00081982346	NA	0	NA	TRUE	NA	NA	NA	C	coding	891	2676	1158	3833	15.0	-37	True	AATAAA	-16
PB.4313.4	chr16	-	3991	13	full-splice_match	PALB2	ENST00000568219.5	3963	13	-26	-2	-1	2	multi-exon	FALSE	canonical	1	999	junction_12	37953.75370352055	NA	0	NA	TRUE	NA	NA	NA	C	coding	891	2676	1023	3698	15.0	-53	True	AATAAA	-16
PB.4313.5	chr16	-	4850	13	novel_in_catalog	PALB2	novel	626	3	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	2662	junction_12	37567.69295625638	NA	2	NA	TRUE	NA	NA	NA	C	coding	1188	3567	993	4559	20.0	-39	True	AATAAA	-14
PB.4313.6	chr16	-	3400	10	incomplete-splice_match	PALB2	ENST00000261584.8	4003	13	-26	18084	-26	2817	3prime_fragment	FALSE	canonical	1	52887	junction_9	29973.718374767526	NA	0	NA	TRUE	NA	NA	NA	C	coding	1038	3117	180	3296	5.0	-78	True	NA	NA
PB.10134.6	chr6	+	4159	17	novel_in_catalog	CRYBG1	novel	9909	22	NA	NA	9194	-8	no_combination_of_known_junctions	FALSE	canonical	1	4472	junction_15	74698.1031080013	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	148	2019	35.0	2	True	AATAAA	-22
PB.10134.9	chr6	+	3290	5	incomplete-splice_match	CRYBG1	ENST00000369066.7	7553	20	9199	37728	9199	-19582	internal_fragment	FALSE	canonical	1	231845	junction_1	13113.872587836135	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	143	877	30.0	-6286	False	NA	NA
PB.11285.4	chr8	+	2670	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-23	-517	-9	517	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	187	1335	15.0	-4	True	NA	NA
PB.11285.7	chr8	+	2334	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-19	-185	-5	185	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	183	1331	20.0	0	True	TTTAAA	-15
PB.794.1	chr1	-	3300	23	novel_in_catalog	THBS3	novel	768	2	NA	NA	-112	-1	combination_of_known_junctions	FALSE	canonical	1	15372	junction_22	63549.1751949518	NA	2	NA	TRUE	NA	NA	NA	C	coding	918	2757	294	3050	30.0	14	True	CATAAA	-16
PB.11285.1	chr8	+	3414	12	novel_in_catalog	ATP6V1C1	novel	1501	11	NA	NA	-18	104	intron_retention	FALSE	canonical	1	368963	junction_10	96264.55567182667	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	221	1150	15.0	-38	False	AATAAA	-19
PB.11357.14	chr8	-	4461	32	full-splice_match	PTK2	ENST00000522684.5	4955	32	-12	506	-12	-1	multi-exon	FALSE	canonical	1	93172	junction_31	116404.812928566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	243	3401	30.0	-17	True	ATTAAA	-14
PB.11285.3	chr8	+	4906	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-28	-2748	11	-738	multi-exon	TRUE	canonical	1	368963	junction_10	96598.57796870712	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	192	1340	15.0	-9	True	AATAAA	-20
PB.11285.2	chr8	+	5013	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-13	-2870	1	-616	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	3	NA	TRUE	NA	NA	NA	C	coding	382	1149	177	1325	45.0	6	True	AATGAA	-17
PB.752.1	chr1	+	3034	12	full-splice_match	TUFT1	ENST00000368848.6	3033	12	-2	1	1	-1	multi-exon	FALSE	canonical	1	64589	junction_1	43320.766501158934	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	62	1159	5.0	-3	True	AATAAA	-22
PB.633.2	chr1	-	1112	7	full-splice_match	BCAS2	ENST00000369541.3	1299	7	19	168	9	159	multi-exon	FALSE	canonical	1	129671	junction_2	254934.00362735495	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	30	707	55.0	-6	True	AATAAA	-30
PB.633.1	chr1	-	1277	7	full-splice_match	BCAS2	ENST00000369541.3	1299	7	18	4	8	-4	multi-exon	FALSE	canonical	1	129671	junction_2	254934.00362735495	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	31	708	35.0	-7	True	NA	NA
PB.9863.7	chr6	+	2835	4	novel_not_in_catalog	TCF19	novel	3290	4	NA	NA	-3	-438	intron_retention	FALSE	canonical	1	2011	junction_1	138125.25645305504	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	738	1775	30.0	-50	True	AATAAA	-23
PB.11710.6	chr9	-	3001	16	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	-28	3	no_combination_of_known_junctions	FALSE	canonical	1	17989	junction_12	129063.81479655714	NA	0	NA	TRUE	NA	NA	NA	B	coding	793	2382	61	2442	10.0	-47	True	AATAAA	-16
PB.11710.7	chr9	-	3198	17	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	217691	junction_16	98885.40376143741	NA	0	NA	TRUE	NA	NA	NA	B	coding	871	2616	25	2640	10.0	-11	True	AATAAA	-15
PB.5256.9	chr17	-	4409	31	novel_in_catalog	UNC13D	novel	668	4	NA	NA	25	-5	intron_retention	FALSE	canonical	1	154056	junction_30	56068.49468902597	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	2184	3674	30.0	-11	True	AATAAA	-20
PB.5256.8	chr17	-	2185	13	novel_in_catalog	UNC13D	novel	668	4	NA	NA	-474	-4	intron_retention	FALSE	canonical	1	7967	junction_1	105192.50243914593	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	27	1367	30.0	9337	False	AATAAA	-21
PB.11710.2	chr9	-	4333	17	novel_not_in_catalog	TMEM245	novel	7980	18	NA	NA	18	172	any annotated donor/acceptor	FALSE	canonical	1	53822	junction_13	121340.3318606905	NA	1	NA	TRUE	NA	NA	NA	B	coding	870	2613	15	2627	60.0	-1	True	NA	NA
PB.11710.3	chr9	-	4173	17	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	217691	junction_16	98885.40376143741	NA	0	NA	TRUE	NA	NA	NA	B	coding	871	2616	24	2639	100.0	-10	True	NA	NA
PB.5256.3	chr17	-	4006	33	novel_not_in_catalog	UNC13D	novel	668	4	NA	NA	-28	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78682.47388713702	NA	6	3	TRUE	NA	NA	NA	C	coding	1090	3273	52	3324	30.0	-6	True	AATAAA	-21
PB.5256.2	chr17	-	4212	32	full-splice_match	UNC13D	ENST00000207549.8	4393	32	142	39	-23	0	multi-exon	FALSE	canonical	1	154056	junction_31	55287.36904664479	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3273	239	3511	80.0	-5	True	NA	NA
PB.5256.1	chr17	-	4264	32	full-splice_match	UNC13D	ENST00000207549.8	4393	32	323	-194	24	194	multi-exon	FALSE	canonical	1	154056	junction_31	55287.36904664479	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3273	58	3330	20.0	-12	True	AATAAA	-14
PB.5256.6	chr17	-	3115	22	novel_not_in_catalog	UNC13D	novel	668	4	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_21	86495.9021166089	NA	9	NA	TRUE	NA	NA	NA	C	coding	777	2334	46	2379	30.0	0	True	AATAAA	-21
PB.11710.8	chr9	-	3099	16	novel_in_catalog	TMEM245	novel	7980	18	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	4900	junction_10	129928.92008964834	NA	0	NA	TRUE	NA	NA	NA	B	coding	836	2511	35	2545	15.0	-21	True	AATAAA	-11
PB.10777.26	chr7	+	5731	8	full-splice_match	BCAP29	ENST00000005259.8	4572	8	284	-1443	0	-4	multi-exon	FALSE	canonical	1	279651	junction_1	114728.25877165359	NA	4	NA	TRUE	NA	NA	NA	C	coding	241	726	56	781	15.0	15	True	ATTAAA	-16
PB.5335.9	chr17	-	1607	6	novel_in_catalog	PYCR1	novel	1855	7	NA	NA	-2	-10	intron_retention	FALSE	canonical	1	19998	junction_1	456323.08946683817	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	85	645	45.0	-1	True	NA	NA
PB.5335.8	chr17	-	2809	7	full-splice_match	PYCR1	ENST00000405481.8	841	7	2	-1970	2	-10	multi-exon	FALSE	canonical	1	215505	junction_6	301886.47597491933	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	81	980	45.0	3	True	NA	NA
PB.11700.9	chr9	+	3409	15	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-14	-5642	intron_retention	FALSE	canonical	1	267	junction_6	200234.94307194615	NA	15	2	TRUE	NA	NA	NA	C	coding	448	1347	743	2089	45.0	-43	True	AAAAAG	-22
PB.4303.2	chr16	-	2477	1	full-splice_match	AC092119.2	ENST00000616774.1	1491	1	-1322	336	-1322	-336	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-26	True	NA	NA
PB.4303.1	chr16	-	2819	1	full-splice_match	AC092119.2	ENST00000616774.1	1491	1	-1330	2	-1330	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	106	321	2206	2526	20.0	-34	True	NA	NA
PB.11700.5	chr9	+	3685	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-15	-5588	intron_retention	FALSE	canonical	1	4241	junction_5	194613.43407729943	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	962	2311	100.0	-44	True	AATACA	-11
PB.5335.2	chr17	-	1706	7	full-splice_match	PYCR1	ENST00000629768.2	1740	7	30	4	-2	-4	multi-exon	FALSE	canonical	1	130444	junction_1	392807.9027046455	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	85	738	50.0	-1	True	NA	NA
PB.11700.7	chr9	+	2739	16	full-splice_match	SLC44A1	ENST00000374723.5	9640	16	-15	6916	-15	-5588	multi-exon	FALSE	canonical	1	6330	junction_15	167591.98353217522	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	263	2221	100.0	-44	True	AATACA	-11
PB.11700.6	chr9	+	3475	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	120	6916	120	-5588	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	128	2101	100.0	-5	True	AATACA	-11
PB.5335.7	chr17	-	2993	6	novel_in_catalog	PYCR1	novel	1855	7	NA	NA	12	-10	intron_retention	FALSE	canonical	1	215505	junction_5	330616.88246403873	NA	1	1	TRUE	NA	NA	NA	C	coding	402	1209	102	1310	45.0	-18	True	NA	NA
PB.5335.6	chr17	-	1863	8	full-splice_match	PYCR1	ENST00000619204.4	1904	8	32	9	0	-9	multi-exon	FALSE	canonical	1	215505	junction_7	287801.5220498392	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	83	1042	45.0	1	True	NA	NA
PB.5335.5	chr17	-	2054	7	novel_in_catalog	PYCR1	novel	1855	7	NA	NA	3	-9	intron_retention	FALSE	canonical	1	215505	junction_6	310277.81322711427	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	111	1091	45.0	-27	True	NA	NA
PB.5335.4	chr17	-	2128	8	novel_in_catalog	PYCR1	novel	1855	7	NA	NA	-12	-9	intron_retention	FALSE	canonical	1	11163	junction_7	351883.87897830206	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	348	1307	45.0	4627	False	NA	NA
PB.1781.8	chr11	+	3047	8	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-41	1603	intron_retention	FALSE	canonical	1	2315	junction_7	330931.5032803431	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	187	1128	70.0	-1233	False	NA	NA
PB.1781.9	chr11	+	2909	8	novel_not_in_catalog	TRIM22	novel	2989	8	NA	NA	-18	-92	intron_retention	FALSE	canonical	1	2409	junction_3	356525.25824063434	NA	3	1	TRUE	NA	NA	NA	C	coding	309	930	857	1786	35.0	-54	True	AATAAA	-20
PB.1781.2	chr11	+	2497	3	incomplete-splice_match	TRIM22	ENST00000425490.5	812	5	-68	-54	-60	-16	intron_retention	FALSE	canonical	1	4807	junction_1	283570.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	270	749	20.0	-19	True	NA	NA
PB.1781.3	chr11	+	4359	6	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-30	-91	intron_retention	FALSE	canonical	1	571947	junction_1	198865.14408955633	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	2306	3235	40.0	-66	True	AATAAA	-21
PB.1781.1	chr11	+	3021	9	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-102	-2	intron_retention	FALSE	canonical	1	4807	junction_1	332860.2139457108	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	312	1808	25.0	-1426	False	AATAAA	-15
PB.1781.6	chr11	+	2792	8	novel_not_in_catalog	TRIM22	novel	2989	8	NA	NA	-3	-91	intron_retention	FALSE	canonical	1	4240	junction_2	332840.06037152803	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	556	1668	40.0	-3	True	AATAAA	-21
PB.1781.7	chr11	+	1261	8	full-splice_match	TRIM22	ENST00000379965.7	2989	8	181	1547	-10	-1	multi-exon	FALSE	canonical	1	571947	junction_1	191213.07895526136	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	909	352	1260	40.0	13	True	AATAAA	-26
PB.1781.4	chr11	+	2730	8	full-splice_match	TRIM22	ENST00000379965.7	2989	8	168	91	-23	-91	multi-exon	FALSE	canonical	1	571947	junction_1	191213.07895526136	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	110	1606	40.0	0	True	AATAAA	-21
PB.1781.5	chr11	+	3707	7	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-29	-91	intron_retention	FALSE	canonical	1	571947	junction_1	199833.64934399532	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	1654	2583	40.0	-6	True	AATAAA	-21
PB.9082.2	chr4	+	1137	2	full-splice_match	ING2	ENST00000302327.3	1189	2	58	-6	58	6	multi-exon	FALSE	canonical	1	140859	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	145	987	25.0	-10	True	ATTAAA	-22
PB.512.7	chr1	-	2333	10	full-splice_match	ZNHIT6	ENST00000370574.3	2797	10	255	209	255	-209	multi-exon	FALSE	canonical	1	137685	junction_2	57688.20722161891	NA	2	NA	TRUE	NA	NA	NA	C	coding	398	1197	96	1292	65.0	251	False	NA	NA
PB.9082.1	chr4	+	2791	2	full-splice_match	ING2	ENST00000302327.3	1189	2	45	-1647	45	1647	multi-exon	FALSE	canonical	1	140859	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	158	1000	40.0	-23	True	ATTAAA	-16
PB.859.10	chr1	-	3051	1	novel_in_catalog	CD48	novel	1126	4	NA	NA	12	-25222	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	96	291	29	319	65.0	-1	True	NA	NA
PB.9103.4	chr4	+	3140	5	novel_not_in_catalog	CYP4V2	novel	2042	11	NA	NA	-99	-4	any annotated donor/acceptor	FALSE	canonical	1	5557	junction_1	59277.14576198402	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-6571	False	AATAAA	-14
PB.9103.5	chr4	+	3546	5	novel_not_in_catalog	CYP4V2	novel	2042	11	NA	NA	-50	6	any annotated donor/acceptor	FALSE	canonical	1	5557	junction_1	59277.14576198402	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6522	False	AATAAA	-22
PB.9103.2	chr4	+	4604	11	full-splice_match	CYP4V2	ENST00000378802.4	2042	11	97	-2659	97	4	multi-exon	TRUE	canonical	1	46338	junction_2	44669.35115725323	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	208	1785	15.0	-168	False	AATAAA	-20
PB.9103.3	chr4	+	3999	11	full-splice_match	CYP4V2	ENST00000378802.4	2042	11	250	-2207	250	-3	multi-exon	FALSE	canonical	1	46338	junction_2	44669.35115725323	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	55	1632	25.0	-15	False	AATAAA	-15
PB.9103.1	chr4	+	1855	1	genic	CYP4V2	novel	NA	NA	NA	NA	-33	-17460	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	178	537	338	874	25.0	-298	False	AATAAA	-14
PB.1795.1	chr11	-	7636	2	full-splice_match	GVINP1	ENST00000526769.3	8438	2	-2	804	-2	270	multi-exon	FALSE	canonical	1	26124	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	1808	5427	1939	7365	30.0	-1	True	AATATA	-35
PB.1795.2	chr11	-	2558	1	full-splice_match	GVINP1	ENST00000531871.3	7271	1	4982	-269	4982	269	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	744	2235	54	2288	30.0	NA	False	AATATA	-34
PB.668.2	chr1	+	2053	4	full-splice_match	FAM72D	ENST00000400889.2	2397	4	3	341	3	-341	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	149	450	846	1295	80.0	NA	False	NA	NA
PB.7483.1	chr21	+	2280	8	full-splice_match	MAP3K7CL	ENST00000341618.8	1855	8	-435	10	-273	-9	multi-exon	FALSE	canonical	1	3838	junction_5	87530.46393113658	NA	14	NA	TRUE	NA	NA	NA	A	coding	242	729	565	1293	35.0	62	False	ATTAAA	-9
PB.846.1	chr1	+	2215	1	antisense	novelGene_KCNJ10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	145	438	489	926	85.0	1006	False	NA	NA
PB.7421.3	chr20	-	2603	6	incomplete-splice_match	ARFRP1	ENST00000618838.4	1623	8	-54	51	24	5	intron_retention	FALSE	canonical	1	425049	junction_1	62014.29733537259	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	1203	1667	5.0	30	True	AATAAA	-18
PB.2527.5	chr12	-	2423	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-9	2600	-1	905	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	86	1219	20.0	-13	True	ATTAAA	-25
PB.1339.39	chr10	-	2830	1	novel_in_catalog	ABI1	novel	3362	10	NA	NA	46227	2392	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.2527.7	chr12	-	1311	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-20	3723	2	-42	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	97	1230	75.0	-24	True	AATAAA	-19
PB.2527.6	chr12	-	1681	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-27	3360	1	145	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	104	1237	45.0	25	False	AATAAA	-19
PB.2527.1	chr12	-	5015	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-4	3	-4	1	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	3	NA	TRUE	NA	NA	NA	C	coding	377	1134	81	1214	20.0	-8	True	AATAAA	-13
PB.2527.3	chr12	-	3656	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-26	1384	2	-1380	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	103	1236	15.0	26	False	ATTAAA	-15
PB.2527.2	chr12	-	4115	14	full-splice_match	ERGIC2	ENST00000360150.8	5014	14	-9	908	-1	-904	multi-exon	FALSE	canonical	1	395953	junction_10	91790.08219007944	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	86	1219	40.0	-13	True	ATTAAA	-14
PB.266.24	chr1	-	2382	5	full-splice_match	AK2	ENST00000487289.1	920	5	-35	-1427	-2	1427	multi-exon	FALSE	canonical	1	632	junction_2	286059.00213450287	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	52	540	20.0	-1	True	NA	NA
PB.10945.1	chr7	-	3847	21	novel_not_in_catalog	PAXIP1	novel	3827	21	NA	NA	-331	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	76631.62601459009	NA	11	NA	TRUE	NA	NA	NA	B	coding	1043	3132	258	3389	35.0	-292	False	AATAAA	-16
PB.10768.1	chr7	-	2176	1	antisense	novelGene_KMT2E_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11480.10	chr9	-	2881	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	-26	2855	-26	-2855	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	608	1827	575	2401	65.0	-11	True	NA	NA
PB.3810.4	chr15	+	2924	7	full-splice_match	HAUS2	ENST00000564279.5	626	7	-1	-2297	-1	-3	multi-exon	TRUE	canonical	1	35733	junction_3	95489.99599783563	NA	4	NA	TRUE	NA	NA	NA	C	coding	124	375	17	391	25.0	19	True	NA	NA
PB.11480.12	chr9	-	2510	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	-23	3223	-23	-3223	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	608	1827	572	2398	10.0	-8	True	TATAAA	-14
PB.11480.13	chr9	-	2234	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	-58	3534	-58	-3534	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	542	1626	607	2232	30.0	-43	False	AATAAA	-18
PB.3810.1	chr15	+	2774	5	full-splice_match	HAUS2	ENST00000568876.5	1702	5	0	-1072	0	0	multi-exon	FALSE	canonical	1	28140	junction_1	108616.25301347631	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	127	660	20.0	-10	True	NA	NA
PB.3810.3	chr15	+	2849	6	full-splice_match	HAUS2	ENST00000260372.7	3949	6	36	1064	8	0	multi-exon	FALSE	canonical	1	152869	junction_1	57129.87590044284	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	109	735	20.0	8	True	NA	NA
PB.3810.2	chr15	+	2788	5	full-splice_match	HAUS2	ENST00000563479.5	590	5	-3	-2195	1	-2	multi-exon	FALSE	canonical	1	12232	junction_2	116663.2603744105	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	251	676	25.0	-3	True	NA	NA
PB.10450.6	chr7	+	2762	9	novel_in_catalog	SNX10	novel	2613	7	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	1	2675	junction_2	154924.84413902115	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	343	1017	50.0	-66	True	ATTAAA	-5
PB.10450.7	chr7	+	2468	7	full-splice_match	SNX10	ENST00000338523.8	2546	7	70	8	-18	0	multi-exon	FALSE	canonical	1	170401	junction_1	83849.13991806953	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	118	723	50.0	-21	True	ATTAAA	-5
PB.1959.1	chr11	-	4429	15	novel_not_in_catalog	OSBP	novel	5083	14	NA	NA	370	-1	any annotated donor/acceptor	TRUE	canonical	1	1510	junction_14	138861.07058453298	NA	0	NA	TRUE	NA	NA	NA	A	coding	682	2049	203	2251	20.0	-4	True	ATTAAA	-17
PB.5928.10	chr19	+	3260	14	novel_in_catalog	CD22	novel	554	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	56769	junction_2	178634.96187370853	NA	2	NA	TRUE	NA	NA	NA	C	coding	845	2538	65	2602	40.0	2	True	AATAAA	-21
PB.3973.1	chr15	+	3287	1	novel_in_catalog	UBL7-AS1	novel	561	4	NA	NA	-16	-14645	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-8	True	NA	NA
PB.10450.3	chr7	+	2290	8	novel_in_catalog	SNX10	novel	2613	7	NA	NA	-33	-430	combination_of_known_junctions	FALSE	canonical	1	12797	junction_2	144653.20280066322	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	301	975	70.0	0	True	ATTAAA	-31
PB.3973.3	chr15	+	3049	3	novel_in_catalog	UBL7-AS1	novel	561	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	14181	junction_2	1484.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	8	True	NA	NA
PB.3973.2	chr15	+	2390	1	novel_in_catalog	UBL7-AS1	novel	561	4	NA	NA	-8	-15534	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.6338.48	chr2	-	4315	13	novel_in_catalog	PUM2	novel	6112	20	NA	NA	-7	-24965	combination_of_known_junctions	FALSE	canonical	1	19552	junction_12	141393.277052773	NA	3	NA	TRUE	NA	NA	NA	C	coding	684	2055	51	2105	80.0	-8	True	NA	NA
PB.6338.49	chr2	-	3233	13	incomplete-splice_match	PUM2	ENST00000403432.5	3594	21	-147	26268	1	-26268	3prime_fragment	FALSE	canonical	1	242233	junction_1	95589.44141174652	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	272	2326	35.0	-16	True	AATAAA	-10
PB.10450.8	chr7	+	2412	8	novel_in_catalog	SNX10	novel	2613	7	NA	NA	12	-263	combination_of_known_junctions	FALSE	canonical	1	12797	junction_2	144653.20280066322	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	256	930	60.0	-1128	False	AATACA	-3
PB.10450.9	chr7	+	2812	9	novel_not_in_catalog	SNX10	novel	2613	7	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	861	junction_2	158237.0203045399	NA	4	NA	TRUE	NA	NA	NA	C	coding	161	486	582	1067	50.0	-1116	False	ATTAAA	-5
PB.1339.31	chr10	-	1982	8	novel_in_catalog	ABI1	novel	3362	10	NA	NA	0	692	combination_of_known_junctions	FALSE	canonical	1	149523	junction_2	222125.107781858	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	124	1290	10.0	-3	True	TATAAA	-33
PB.9863.2	chr6	+	2645	4	full-splice_match	TCF19	ENST00000376255.4	3039	4	-43	437	-38	-437	multi-exon	FALSE	canonical	1	50453	junction_1	115457.4193833669	NA	3	NA	TRUE	NA	NA	NA	C	coding	345	1038	547	1584	30.0	-85	False	AATAAA	-24
PB.4924.1	chr17	+	2004	11	novel_in_catalog	AATF	novel	2141	12	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	1	10687	junction_10	237764.06044230066	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	188	1798	15.0	-17	True	AATAAA	-17
PB.4924.2	chr17	+	2023	12	full-splice_match	AATF	ENST00000619387.4	2141	12	117	1	-27	0	multi-exon	FALSE	canonical	1	521211	junction_7	116238.66980157536	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	135	1817	15.0	36	True	AATAAA	-17
PB.5030.8	chr17	-	1452	6	full-splice_match	LSM12	ENST00000585388.1	942	6	58	-568	58	464	multi-exon	FALSE	canonical	1	91	junction_3	7719.037727592735	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	15	707	20.0	49	True	ATTAAA	-10
PB.1600.2	chr10	+	2605	2	full-splice_match	OLMALINC	ENST00000454935.1	2551	2	-54	0	17	0	multi-exon	FALSE	canonical	1	103482	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	387	689	35.0	-282	False	TTTAAA	-10
PB.1600.3	chr10	+	1737	4	novel_not_in_catalog	OLMALINC	novel	1184	4	NA	NA	33	0	any annotated donor/acceptor	FALSE	canonical	1	10804	junction_1	14659.041199508543	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-266	False	TTTAAA	-10
PB.3094.3	chr13	+	1966	15	full-splice_match	B3GLCT	ENST00000343307.4	4254	15	1	2287	1	-2287	multi-exon	FALSE	canonical	1	24722	junction_1	15206.11976646379	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	149	1645	5.0	-38	False	AATAAA	-17
PB.1600.1	chr10	+	2651	3	incomplete-splice_match	OLMALINC	ENST00000641708.1	1184	4	122	4999	20	-7	3prime_fragment	FALSE	canonical	1	10804	junction_1	17360.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	8	True	TTTAAA	-3
PB.3094.5	chr13	+	3448	15	novel_not_in_catalog	B3GLCT	novel	4254	15	NA	NA	19	-756	any annotated donor/acceptor	FALSE	canonical	1	1400	junction_5	23135.551408150695	NA	5	NA	TRUE	NA	NA	NA	C	coding	108	327	131	457	30.0	-20	False	AGTAAA	-13
PB.3094.4	chr13	+	2841	15	full-splice_match	B3GLCT	ENST00000343307.4	4254	15	2	1411	2	-1411	multi-exon	FALSE	canonical	1	24722	junction_1	15206.11976646379	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	1	1644	20.0	-37	False	AATAAA	-16
PB.1600.4	chr10	+	2837	3	incomplete-splice_match	OLMALINC	ENST00000641708.1	1184	4	114	4821	12	171	3prime_fragment	FALSE	canonical	1	10804	junction_1	17360.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	ATTAAA	-13
PB.3094.6	chr13	+	3391	15	full-splice_match	B3GLCT	ENST00000343307.4	4254	15	106	757	106	-757	multi-exon	FALSE	canonical	1	24722	junction_1	15206.11976646379	NA	3	NA	TRUE	NA	NA	NA	C	coding	498	1497	44	1540	30.0	67	False	AGTAAA	-12
PB.3615.10	chr14	+	2799	14	novel_not_in_catalog	DGLUCY	novel	909	5	NA	NA	-28	-1	any annotated donor/acceptor	FALSE	canonical	1	169	junction_13	128074.67491309386	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	435	2243	25.0	1	True	NA	NA
PB.3615.11	chr14	+	2763	14	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	21023	junction_1	123672.51409103654	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	430	2244	30.0	6	True	NA	NA
PB.3615.12	chr14	+	3811	15	novel_not_in_catalog	DGLUCY	novel	909	5	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	1381	junction_13	127621.70975454556	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	403	2253	30.0	0	True	NA	NA
PB.8787.7	chr4	+	3379	18	novel_in_catalog	EXOC1	novel	3551	19	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	152516	junction_1	65480.73102031633	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	223	2862	35.0	3	True	AATAAA	-22
PB.8787.6	chr4	+	2404	17	incomplete-splice_match	EXOC1	ENST00000346134.11	3357	19	-20	5236	-20	-4779	3prime_fragment	FALSE	canonical	1	38203	junction_1	88643.10057110692	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2250	154	2403	75.0	-84	True	NA	NA
PB.8787.5	chr4	+	2431	16	novel_in_catalog	EXOC1	novel	3551	19	NA	NA	0	-4779	combination_of_known_junctions	FALSE	canonical	1	152516	junction_1	55776.9871069502	NA	2	NA	TRUE	NA	NA	NA	C	coding	735	2205	226	2430	75.0	0	True	NA	NA
PB.2142.1	chr11	-	1167	5	full-splice_match	LAMTOR1	ENST00000278671.9	1179	5	13	-1	13	1	multi-exon	FALSE	canonical	1	1194641	junction_4	421590.9532040506	NA	1	NA	TRUE	NA	NA	NA	A	coding	161	486	151	636	0.0	9381	False	GATAAA	-19
PB.11646.12	chr9	-	4571	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_7	448894.74906184303	NA	5	1	TRUE	NA	NA	NA	C	coding	1022	3069	268	3336	40.0	-6	True	AATAAA	-14
PB.8787.9	chr4	+	2980	19	full-splice_match	EXOC1	ENST00000381295.6	3551	19	61	510	2	-74	multi-exon	FALSE	canonical	1	78464	junction_10	84679.2296755494	NA	0	NA	TRUE	NA	NA	NA	C	coding	894	2685	288	2972	65.0	-62	True	ACTAAA	-8
PB.8787.8	chr4	+	1597	9	novel_not_in_catalog	EXOC1	novel	3551	19	NA	NA	-12	6465	any annotated donor/acceptor	TRUE	canonical	1	5032	junction_8	84464.11843461992	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	302	1408	30.0	-76	True	AATAAA	-18
PB.8472.1	chr3	+	5746	37	novel_not_in_catalog	MED12L	novel	494	3	NA	NA	-2	30796	any annotated donor/acceptor	FALSE	canonical	1	4131	junction_21	6953.742750710264	NA	0	NA	TRUE	NA	NA	NA	A	coding	1791	5373	372	5744	60.0	25	True	NA	NA
PB.7110.34	chr2	+	1818	13	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-74	combination_of_known_junctions	FALSE	canonical	1	45485	junction_12	972138.446913252	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	94	1179	40.0	-39	True	AATAAA	-17
PB.4746.1	chr17	-	2699	17	full-splice_match	FXR2	ENST00000250113.11	2957	17	258	0	258	0	multi-exon	FALSE	canonical	1	255721	junction_16	100510.03985042677	NA	0	NA	TRUE	NA	NA	NA	A	coding	673	2022	78	2099	0.0	287	False	AATAAA	-15
PB.8260.40	chr3	-	2935	17	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-44	-865	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	215010.45939572915	NA	2	1	TRUE	NA	NA	NA	C	coding	669	2010	202	2211	15.0	273	False	TATAAA	-21
PB.727.8	chr1	-	3717	4	novel_not_in_catalog	MCL1	novel	3626	4	NA	NA	-9	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	1271305.4375316561	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	70	903	35.0	10	True	AATAAA	-11
PB.8260.42	chr3	-	2779	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	-5	775	no_combination_of_known_junctions	FALSE	canonical	1	15297	junction_14	224176.9295024989	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	369	2468	35.0	0	True	ATTAAA	-22
PB.8260.44	chr3	-	2331	14	incomplete-splice_match	DCBLD2	ENST00000326857.9	3959	16	-401	3607	-38	-7	3prime_fragment	FALSE	canonical	1	381028	junction_6	175194.0146826913	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	402	2219	30.0	279	False	AATGAA	-21
PB.7873.1	chr22	-	2428	3	intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	474	junction_2	227.5	NA	5	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.8260.46	chr3	-	2071	13	incomplete-splice_match	DCBLD2	ENST00000326857.9	3959	16	-407	10304	-44	-176	3prime_fragment	FALSE	canonical	1	381028	junction_5	180953.67334507577	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1662	408	2069	45.0	273	False	NA	NA
PB.8260.47	chr3	-	1846	11	incomplete-splice_match	DCBLD2	ENST00000326857.9	3959	16	-400	13689	-37	859	3prime_fragment	FALSE	canonical	1	381028	junction_3	171630.2552065049	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1446	401	1846	30.0	280	False	AAAACA	-24
PB.8260.48	chr3	-	2727	10	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-48	-4006	any annotated donor/acceptor	FALSE	canonical	1	556	junction_1	160097.1072804114	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	412	1662	40.0	269	False	ATTAAA	-12
PB.8260.49	chr3	-	2641	6	incomplete-splice_match	DCBLD2	ENST00000326857.9	3959	16	-369	23003	-6	1523	3prime_fragment	FALSE	canonical	1	419535	junction_4	67444.69993705954	NA	3	NA	TRUE	NA	NA	NA	C	coding	277	834	370	1203	95.0	-1	True	NA	NA
PB.2178.1	chr11	-	4271	3	full-splice_match	LRRC32	ENST00000260061.9	4207	3	-65	1	-65	0	multi-exon	FALSE	canonical	1	72007	junction_2	7316.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	662	1989	204	2192	10.0	-66	False	ATTAAA	-19
PB.4456.12	chr16	+	3822	15	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	548	junction_1	203035.58708572472	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	320	2383	35.0	-7	True	NA	NA
PB.11420.1	chr9	-	9153	6	novel_not_in_catalog	WASHC1	novel	1827	11	NA	NA	4732	6	intron_retention	FALSE	canonical	1	790	junction_2	23280.452320348075	NA	12	NA	TRUE	NA	NA	NA	B	coding	106	321	7036	7356	40.0	NA	False	AATAAA	-17
PB.8339.8	chr3	-	2709	8	novel_not_in_catalog	ILDR1	novel	2659	7	NA	NA	-56149	-2	any annotated donor/acceptor	FALSE	canonical	1	261	junction_7	13348.434105213408	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	432	1667	15.0	-4	True	AATAAA	-13
PB.3941.2	chr15	-	1413	10	full-splice_match	RPL4	ENST00000307961.10	2769	10	48	1308	-2	0	multi-exon	FALSE	canonical	1	1371308	junction_4	3034677.157309627	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	46	1329	25.0	14	True	AATAAA	-24
PB.8404.1	chr3	+	2495	20	full-splice_match	DNAJC13	ENST00000486798.5	2306	20	-193	4	-10	-4	multi-exon	TRUE	canonical	1	131282	junction_2	34413.849388254304	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2235	259	2493	10.0	0	True	AATAAA	-19
PB.1945.8	chr11	-	3051	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-2992	-17801	no_combination_of_known_junctions	FALSE	canonical	1	18729	junction_5	315855.87987589766	NA	1	NA	TRUE	NA	NA	NA	B	coding	292	879	449	1327	20.0	5856	False	AATAAA	-18
PB.1945.9	chr11	-	2962	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3079	-17801	no_combination_of_known_junctions	FALSE	canonical	1	18729	junction_5	288316.95599377225	NA	1	NA	TRUE	NA	NA	NA	B	coding	292	879	360	1238	20.0	5769	False	AATAAA	-18
PB.8645.1	chr4	+	3045	13	full-splice_match	PIGG	ENST00000504346.5	3019	13	-27	1	0	-1	multi-exon	FALSE	canonical	1	10511	junction_1	68637.72177340282	NA	0	NA	TRUE	NA	NA	NA	C	coding	894	2685	203	2887	25.0	-30	True	AATAAA	-15
PB.1945.4	chr11	-	2579	13	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3027	-17800	any annotated donor/acceptor	FALSE	canonical	1	1196	junction_6	296512.1344686232	NA	1	NA	TRUE	NA	NA	NA	B	coding	243	732	206	937	15.0	34	True	AATAAA	-19
PB.1945.5	chr11	-	3894	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3061	-17801	intron_retention	FALSE	canonical	1	276605	junction_12	169767.4016473021	NA	1	NA	TRUE	NA	NA	NA	B	coding	472	1419	305	1723	20.0	0	True	AATAAA	-18
PB.1945.6	chr11	-	3213	12	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3101	-17801	intron_retention	FALSE	non_canonical	0	0	junction_11	245687.1757693524	NA	0	NA	TRUE	NA	NA	NA	B	coding	438	1317	1061	2377	20.0	5747	False	AATAAA	-18
PB.1945.7	chr11	-	2879	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3033	-17801	no_combination_of_known_junctions	FALSE	canonical	1	18729	junction_5	252108.96248352758	NA	1	NA	TRUE	NA	NA	NA	B	coding	292	879	277	1155	20.0	28	True	AATAAA	-18
PB.8339.4	chr3	-	2683	7	novel_in_catalog	ILDR1	novel	2659	7	NA	NA	24	-1	no_combination_of_known_junctions	FALSE	canonical	1	154	junction_3	12715.523457787947	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	147	1640	15.0	23	True	AATAAA	-14
PB.1945.1	chr11	-	2472	18	novel_in_catalog	PRG2	novel	1424	6	NA	NA	-36466	81	no_combination_of_known_junctions	FALSE	canonical	1	8909	junction_5	224383.63436075542	NA	0	NA	TRUE	NA	NA	NA	A	coding	683	2052	308	2359	15.0	-3	True	AATAAA	-20
PB.1945.2	chr11	-	3054	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3004	-17800	intron_retention	FALSE	canonical	1	30774	junction_12	237031.75110749053	NA	1	NA	TRUE	NA	NA	NA	B	coding	438	1317	901	2217	15.0	5844	False	AATAAA	-19
PB.1945.3	chr11	-	2902	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3028	-17800	intron_retention	FALSE	canonical	1	276605	junction_12	185997.89055813616	NA	1	NA	TRUE	NA	NA	NA	B	coding	438	1317	749	2065	15.0	33	True	AATAAA	-19
PB.3667.5	chr14	+	3569	13	full-splice_match	PPP2R5C	ENST00000350249.7	3845	13	66	210	0	-210	multi-exon	FALSE	canonical	1	460	junction_5	226263.32816842894	NA	4	NA	TRUE	NA	NA	NA	C	coding	475	1428	105	1532	70.0	3	True	NA	NA
PB.3667.4	chr14	+	4006	13	full-splice_match	PPP2R5C	ENST00000350249.7	3845	13	58	-219	-5	53	multi-exon	FALSE	canonical	1	460	junction_5	226263.32816842894	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	113	1540	45.0	-5	True	AATAAA	-19
PB.3667.7	chr14	+	2449	13	full-splice_match	PPP2R5C	ENST00000350249.7	3845	13	16	1380	-15	516	multi-exon	FALSE	canonical	1	460	junction_5	226263.32816842894	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	155	1582	35.0	-16	True	AATAAA	-13
PB.3667.6	chr14	+	3833	13	full-splice_match	PPP2R5C	ENST00000350249.7	3845	13	12	0	12	0	multi-exon	FALSE	canonical	1	460	junction_5	226263.32816842894	NA	3	NA	TRUE	NA	NA	NA	C	coding	475	1428	159	1586	20.0	-20	True	AATAAA	-22
PB.3667.1	chr14	+	3634	15	novel_not_in_catalog	PPP2R5C	novel	4481	16	NA	NA	-88	-184	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	226993.4951605532	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	339	1571	35.0	1	True	AATAAA	-12
PB.3667.3	chr14	+	4115	14	full-splice_match	PPP2R5C	ENST00000334743.9	4328	14	-26	239	0	53	multi-exon	FALSE	canonical	1	460	junction_5	229653.88388227404	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	105	1649	45.0	3	True	AATAAA	-19
PB.3667.2	chr14	+	4137	15	full-splice_match	PPP2R5C	ENST00000328724.9	4045	15	-40	-52	-17	52	multi-exon	FALSE	canonical	1	460	junction_7	221565.50815591257	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	50	1672	40.0	-3742	False	AATAAA	-18
PB.8645.4	chr4	+	3418	13	novel_in_catalog	PIGG	novel	1784	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	35001	junction_7	73664.80625379884	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	1839	3257	20.0	-19	True	AATAAA	-18
PB.3667.9	chr14	+	3959	12	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	0	53	no_combination_of_known_junctions	FALSE	canonical	1	460	junction_5	240063.8238227768	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	139	1548	45.0	0	True	AATAAA	-19
PB.3667.8	chr14	+	1364	11	incomplete-splice_match	PPP2R5C	ENST00000445439.7	1526	12	-71	2943	-10	-2918	3prime_fragment	FALSE	canonical	1	460	junction_5	233106.06898225538	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1215	150	1364	35.0	-11	True	NA	NA
PB.9772.1	chr6	+	2364	3	full-splice_match	ID4	ENST00000378700.7	2344	3	-16	-4	-16	4	multi-exon	FALSE	canonical	1	250102	junction_1	37165.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	386	871	10.0	0	True	ATTAAA	-25
PB.9119.4	chr5	+	3156	10	novel_not_in_catalog	CEP72	novel	2434	12	NA	NA	-1006	1576	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	49171.76990113205	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	608	943	25.0	NA	False	NA	NA
PB.9119.3	chr5	+	5424	12	novel_not_in_catalog	CEP72	novel	2434	12	NA	NA	71	-4	any annotated donor/acceptor	FALSE	canonical	1	37781	junction_9	29795.75870699754	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	20	1870	35.0	3	True	AATAAA	-17
PB.9772.2	chr6	+	1496	3	full-splice_match	ID4	ENST00000378700.7	2344	3	-15	863	-15	-863	multi-exon	FALSE	canonical	1	250102	junction_1	37165.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	385	870	25.0	1	True	ATTAAA	-12
PB.9119.1	chr5	+	2364	12	full-splice_match	CEP72	ENST00000264935.5	2434	12	66	4	66	-4	multi-exon	FALSE	canonical	1	42409	junction_1	28989.78984469652	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	25	1968	35.0	-2	True	AATAAA	-17
PB.8797.4	chr4	-	2795	3	incomplete-splice_match	NOA1	ENST00000264230.4	3415	7	1199	8537	1199	-8537	3prime_fragment	FALSE	canonical	1	448509	junction_2	23573.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	40	1698	90.0	0	True	NA	NA
PB.2666.27	chr12	+	2605	10	incomplete-splice_match	ERBB3	ENST00000553131.5	3237	11	757	0	-386	0	5prime_fragment	FALSE	canonical	1	243283	junction_3	34256.68058807771	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	103	1854	100.0	-7818	False	NA	NA
PB.3941.5	chr15	-	1693	9	novel_in_catalog	RPL4	novel	2769	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	1748373	junction_8	2962166.673733477	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	1175	1609	25.0	3	True	AATAAA	-24
PB.8797.1	chr4	-	2692	7	full-splice_match	NOA1	ENST00000264230.4	3415	7	1216	-493	1216	493	multi-exon	FALSE	canonical	1	306418	junction_4	79469.11220719658	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	23	2119	20.0	-3	True	TATAAA	-21
PB.8797.2	chr4	-	2221	7	full-splice_match	NOA1	ENST00000264230.4	3415	7	1218	-24	1218	24	multi-exon	FALSE	canonical	1	306418	junction_4	79469.11220719658	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	21	2117	0.0	-1	True	AATAAA	-18
PB.8797.3	chr4	-	2118	6	novel_in_catalog	NOA1	novel	3415	7	NA	NA	1199	19	no_combination_of_known_junctions	FALSE	canonical	1	7771	junction_2	198105.5402863837	NA	1	NA	TRUE	NA	NA	NA	C	coding	659	1980	40	2019	5.0	0	True	AATAAA	-13
PB.5666.6	chr19	-	2931	18	novel_in_catalog	XAB2	novel	2667	19	NA	NA	19	-3	intron_retention	FALSE	canonical	1	380424	junction_1	99782.04786800861	NA	2	NA	TRUE	NA	NA	NA	C	coding	801	2406	469	2874	15.0	-2	True	NA	NA
PB.5666.7	chr19	-	3028	17	novel_in_catalog	XAB2	novel	2667	19	NA	NA	20	-5	intron_retention	FALSE	canonical	1	380424	junction_1	101416.56377394593	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	468	2537	20.0	-1	True	NA	NA
PB.5666.4	chr19	-	2659	19	full-splice_match	XAB2	ENST00000358368.4	2667	19	7	1	7	0	multi-exon	FALSE	canonical	1	380424	junction_1	103882.05376855446	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	32	2599	10.0	-14	True	NA	NA
PB.5666.5	chr19	-	3021	17	novel_in_catalog	XAB2	novel	2667	19	NA	NA	20	-3	intron_retention	FALSE	canonical	1	380424	junction_1	101363.30105921518	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	1255	2964	15.0	-1	True	NA	NA
PB.5666.2	chr19	-	2759	18	novel_in_catalog	XAB2	novel	2667	19	NA	NA	7	0	intron_retention	FALSE	canonical	1	380424	junction_1	105219.59843996986	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	32	2263	10.0	-14	True	NA	NA
PB.5666.3	chr19	-	2699	19	novel_not_in_catalog	XAB2	novel	2667	19	NA	NA	19	0	any annotated donor/acceptor	FALSE	canonical	1	142	junction_16	157717.74002214006	NA	9	1	TRUE	NA	NA	NA	C	coding	747	2244	396	2639	10.0	-2	True	NA	NA
PB.5666.1	chr19	-	2762	18	novel_in_catalog	XAB2	novel	2667	19	NA	NA	-5	0	intron_retention	FALSE	canonical	1	380424	junction_1	105886.94601204523	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	993	2702	10.0	-26	True	NA	NA
PB.11384.5	chr8	-	1773	11	full-splice_match	PUF60	ENST00000456095.6	1736	11	-39	2	-4	-2	multi-exon	FALSE	canonical	1	194078	junction_10	656167.5315550214	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	40	1632	10.0	7035	False	GATAAA	-23
PB.11384.4	chr8	-	1789	11	full-splice_match	PUF60	ENST00000349157.10	1821	11	30	2	-2	-2	multi-exon	FALSE	canonical	1	474945	junction_10	629758.8767713322	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	20	1648	10.0	-8	True	GATAAA	-23
PB.11482.18	chr9	+	4060	8	novel_not_in_catalog	MTAP	novel	6122	8	NA	NA	1	-17280	any annotated donor/acceptor	FALSE	canonical	1	3434	junction_7	103332.7839679713	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	87	1376	70.0	14	True	NA	NA
PB.11384.6	chr8	-	2168	13	novel_not_in_catalog	PUF60	novel	2412	12	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	1870	junction_12	753089.9010735104	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	238	2028	10.0	0	True	GATAAA	-22
PB.11384.1	chr8	-	1755	10	full-splice_match	PUF60	ENST00000527197.5	1559	10	-49	-147	-17	4	multi-exon	FALSE	canonical	1	194078	junction_9	684638.4715250978	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	67	1608	0.0	-2	True	GATAAA	-29
PB.11384.3	chr8	-	1854	12	full-splice_match	PUF60	ENST00000526683.5	2412	12	523	35	2	-2	multi-exon	FALSE	canonical	1	474945	junction_11	604929.0513758174	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	34	1713	10.0	-22	True	GATAAA	-23
PB.11384.2	chr8	-	4871	10	novel_in_catalog	PUF60	novel	2412	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	474945	junction_9	570788.1314545338	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	3399	4730	10.0	7035	False	GATAAA	-23
PB.11482.12	chr9	+	1901	8	full-splice_match	MTAP	ENST00000644715.1	4909	8	-7	3015	0	-330	multi-exon	FALSE	canonical	1	60552	junction_2	99944.68520544916	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	108	959	35.0	-7	True	AATAAA	-27
PB.11482.13	chr9	+	5804	7	novel_in_catalog	MTAP	novel	6122	8	NA	NA	0	-1632	combination_of_known_junctions	FALSE	canonical	1	9562	junction_6	107790.20327160225	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	103	984	55.0	-2	True	AATAAA	-29
PB.11482.10	chr9	+	2397	8	full-splice_match	MTAP	ENST00000460874.6	1434	8	0	-963	0	-3	multi-exon	FALSE	canonical	1	13756	junction_1	113872.03027387313	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	226	1128	20.0	-7	True	AATAAA	-18
PB.11482.11	chr9	+	5089	8	full-splice_match	MTAP	ENST00000460874.6	1434	8	0	-3655	0	4	multi-exon	FALSE	canonical	1	13756	junction_1	113872.03027387313	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	226	1128	30.0	-7	True	NA	NA
PB.11482.16	chr9	+	5935	8	full-splice_match	MTAP	ENST00000580900.5	7557	8	0	1622	0	-1622	multi-exon	FALSE	canonical	1	8960	junction_7	102212.451402329	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	101	1105	40.0	0	True	AATAAA	-39
PB.11482.17	chr9	+	1981	9	novel_not_in_catalog	MTAP	novel	6122	8	NA	NA	0	-345	any annotated donor/acceptor	FALSE	canonical	1	1926	junction_1	124877.6664640239	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	101	1054	45.0	0	True	AATAAA	-12
PB.11482.14	chr9	+	5023	9	novel_not_in_catalog	MTAP	novel	6122	8	NA	NA	0	278	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	114258.48201111537	NA	3	1	TRUE	NA	NA	NA	C	coding	283	852	103	954	45.0	-2	True	NA	NA
PB.11482.15	chr9	+	3963	7	novel_not_in_catalog	MTAP	novel	6122	8	NA	NA	0	-17268	any annotated donor/acceptor	FALSE	canonical	1	1881	junction_6	109409.57352903609	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	101	1267	60.0	0	True	NA	NA
PB.2386.4	chr12	+	2602	8	novel_not_in_catalog	WNK1	novel	9886	26	NA	NA	-14	-8	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	225315.03583676444	NA	1	1	TRUE	NA	NA	NA	B	coding	578	1734	868	2601	75.0	0	True	NA	NA
PB.7036.8	chr2	-	3243	2	incomplete-splice_match	FARSB	ENST00000281828.6	3369	17	246	75093	246	-75093	3prime_fragment	FALSE	canonical	1	590949	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	2174	2581	80.0	0	True	AATAAA	-18
PB.11445.5	chr9	+	3099	5	full-splice_match	MLANA	ENST00000381477.7	2415	5	87	-771	-19	771	multi-exon	FALSE	canonical	1	249254	junction_1	24580.27739367479	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	74	430	10.0	-4	True	NA	NA
PB.11445.4	chr9	+	4038	5	full-splice_match	MLANA	ENST00000381477.7	2415	5	87	-1710	-19	1710	multi-exon	FALSE	canonical	1	249254	junction_1	24580.27739367479	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	74	430	30.0	-4	True	NA	NA
PB.11445.3	chr9	+	3939	4	novel_in_catalog	MLANA	novel	2415	5	NA	NA	-26	1706	no_combination_of_known_junctions	FALSE	canonical	1	468	junction_1	139894.67541928345	NA	12	1	TRUE	NA	NA	NA	C	coding	114	345	1342	1686	45.0	-11	True	NA	NA
PB.2386.1	chr12	+	8196	25	novel_in_catalog	WNK1	novel	9886	26	NA	NA	-48	607	combination_of_known_junctions	FALSE	canonical	1	241343	junction_8	184835.29734220568	NA	5	NA	TRUE	NA	NA	NA	B	coding	2108	6327	1022	7348	40.0	-1515	False	AATAAA	-20
PB.2386.2	chr12	+	2753	7	incomplete-splice_match	WNK1	ENST00000535572.5	9886	26	-45	50173	-45	-8	3prime_fragment	FALSE	canonical	1	496135	junction_2	74991.1433453978	NA	0	NA	TRUE	NA	NA	NA	B	coding	578	1734	1019	2752	75.0	-1512	False	NA	NA
PB.2386.3	chr12	+	2527	6	incomplete-splice_match	WNK1	ENST00000535572.5	9886	26	-35	51937	-35	-12	3prime_fragment	FALSE	canonical	1	496135	junction_2	81214.51007646356	NA	0	NA	TRUE	NA	NA	NA	B	coding	506	1518	1009	2526	60.0	-21	True	CATAAA	-18
PB.7036.1	chr2	-	1917	17	full-splice_match	FARSB	ENST00000281828.6	3369	17	245	1207	245	-1207	multi-exon	FALSE	canonical	1	447866	junction_15	158542.18429755484	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	20	1789	20.0	-1	True	AATAAA	-18
PB.7036.3	chr2	-	2771	17	novel_not_in_catalog	FARSB	novel	3369	17	NA	NA	246	-1209	any annotated donor/acceptor	FALSE	canonical	1	417	junction_7	236649.14748469807	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	1710	2645	15.0	0	True	AATAAA	-16
PB.7036.2	chr2	-	4356	18	novel_not_in_catalog	FARSB	novel	3369	17	NA	NA	245	-1209	any annotated donor/acceptor	FALSE	canonical	1	7348	junction_15	273614.78720318136	NA	6	NA	TRUE	NA	NA	NA	C	coding	490	1473	2758	4230	15.0	-1	True	AATAAA	-16
PB.2967.11	chr12	-	2060	16	full-splice_match	CAMKK2	ENST00000412367.6	2006	16	-67	13	0	9	multi-exon	FALSE	canonical	1	143289	junction_15	110953.47786747782	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	176	1801	70.0	-45	True	TTTAAA	-7
PB.7036.4	chr2	-	2111	18	novel_not_in_catalog	FARSB	novel	3369	17	NA	NA	245	-1209	any annotated donor/acceptor	FALSE	canonical	1	37082	junction_16	263444.46717895626	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	513	1985	15.0	-1	True	AATAAA	-16
PB.7036.7	chr2	-	1784	17	full-splice_match	FARSB	ENST00000281828.6	3369	17	247	1338	247	-1338	multi-exon	FALSE	canonical	1	447866	junction_15	158542.18429755484	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1767	18	1784	15.0	1	True	NA	NA
PB.2967.12	chr12	-	1915	15	novel_in_catalog	CAMKK2	novel	4453	16	NA	NA	16	9	combination_of_known_junctions	FALSE	canonical	1	86827	junction_2	133796.64224145067	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	160	1656	70.0	-29	True	TTTAAA	-7
PB.8390.3	chr3	+	2488	7	full-splice_match	HMCES	ENST00000383463.8	2515	7	17	10	11	-10	multi-exon	FALSE	canonical	1	245982	junction_1	140057.31976279887	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	73	1137	40.0	-15	True	AATAAA	-5
PB.2994.2	chr12	+	2573	3	full-splice_match	C12orf65	ENST00000425637.2	1632	3	28	-969	3	-28	multi-exon	FALSE	canonical	1	9422	junction_2	119086.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	96	455	35.0	7	True	AATAAA	-16
PB.2994.1	chr12	+	1551	3	full-splice_match	C12orf65	ENST00000253233.5	2073	3	494	28	-27	-28	multi-exon	FALSE	canonical	1	247595	junction_1	25380.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	151	651	35.0	4	True	AATAAA	-16
PB.8390.4	chr3	+	2376	7	novel_not_in_catalog	HMCES	novel	948	6	NA	NA	3	-10	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	229625.70852488527	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	177	1025	40.0	11	True	AATAAA	-5
PB.8280.11	chr3	+	2205	15	incomplete-splice_match	ALCAM	ENST00000306107.9	4701	16	0	5008	0	-2660	3prime_fragment	FALSE	canonical	1	442440	junction_1	84950.93771500209	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1704	501	2204	70.0	0	True	AAAACA	-27
PB.2889.1	chr12	+	2121	13	full-splice_match	TCHP	ENST00000405876.8	3090	13	-22	991	-6	337	multi-exon	FALSE	canonical	1	100251	junction_1	40980.8553002361	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	170	1666	20.0	-319	False	ATTAAA	-17
PB.2889.2	chr12	+	2900	13	full-splice_match	TCHP	ENST00000405876.8	3090	13	-10	200	-4	-194	multi-exon	FALSE	canonical	1	100251	junction_1	40980.8553002361	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	158	1654	15.0	-16	True	ATTAAA	-29
PB.2889.3	chr12	+	3088	13	full-splice_match	TCHP	ENST00000405876.8	3090	13	0	2	0	1	multi-exon	FALSE	canonical	1	100251	junction_1	40980.8553002361	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	148	1644	5.0	-6	True	AATAAA	-16
PB.2889.4	chr12	+	3034	14	novel_not_in_catalog	TCHP	novel	853	4	NA	NA	9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	60944.4133963471	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	96	1592	10.0	3	True	AATAAA	-14
PB.5486.4	chr18	-	3468	4	novel_not_in_catalog	MEX3C	novel	3781	2	NA	NA	-299	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	131147.56611118975	NA	1	NA	TRUE	NA	NA	NA	B	coding	464	1395	276	1670	15.0	-20	True	AATAAA	-20
PB.5486.5	chr18	-	3236	3	novel_not_in_catalog	MEX3C	novel	3781	2	NA	NA	-305	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	139103.0	NA	2	1	TRUE	NA	NA	NA	B	coding	460	1383	61	1443	25.0	-26	True	AATAAA	-15
PB.4396.1	chr16	+	2634	6	full-splice_match	ARMC5	ENST00000268314.8	3612	6	978	0	13	0	multi-exon	FALSE	canonical	1	93020	junction_5	26801.972922902525	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	44	2359	10.0	-2369	False	ATTAAA	-15
PB.3290.2	chr14	+	1431	5	full-splice_match	APEX1	ENST00000555414.5	1437	5	0	6	0	-1	multi-exon	FALSE	canonical	1	327726	junction_1	1119429.4027720941	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	217	1173	5.0	0	True	AATAAA	-14
PB.4306.4	chr16	+	2614	21	full-splice_match	POLR3E	ENST00000299853.9	3697	21	0	1083	0	-5	multi-exon	FALSE	canonical	1	156259	junction_1	99866.33087552582	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	168	2294	45.0	-25	True	AATAAA	-31
PB.8537.4	chr3	+	2728	20	novel_in_catalog	USP13	novel	8323	21	NA	NA	64	-214	combination_of_known_junctions	FALSE	canonical	1	5765	junction_15	44024.89698604165	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	113	2677	80.0	-53	False	TATAAA	-38
PB.4306.5	chr16	+	2908	20	full-splice_match	POLR3E	ENST00000359210.8	2469	20	-25	-414	-1	-2	multi-exon	FALSE	canonical	1	8664	junction_19	121897.29064184616	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	169	2169	20.0	-26	True	AATAAA	-15
PB.6679.3	chr2	+	4381	10	full-splice_match	LIMS1	ENST00000544547.5	4461	10	84	-4	-17	4	multi-exon	FALSE	canonical	1	2303	junction_2	273977.36567087186	NA	6	NA	TRUE	NA	NA	NA	C	coding	330	993	146	1138	25.0	-31	True	AATAAA	-19
PB.4172.1	chr16	+	1627	9	full-splice_match	MLST8	ENST00000569417.5	1870	9	241	2	1	-2	multi-exon	FALSE	canonical	1	95653	junction_1	243236.17370594648	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	114	1094	35.0	-22	True	AATAAA	-30
PB.3290.7	chr14	+	1451	5	full-splice_match	APEX1	ENST00000216714.7	1484	5	34	-1	2	1	multi-exon	FALSE	canonical	1	1492312	junction_1	626077.3554403541	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	235	1191	0.0	3	True	AATAAA	-16
PB.4172.3	chr16	+	1766	8	novel_in_catalog	MLST8	novel	564	4	NA	NA	10	-1	intron_retention	FALSE	canonical	1	76400	junction_1	261128.9571778977	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	466	1248	25.0	13	True	AATAAA	-15
PB.4172.2	chr16	+	1715	9	full-splice_match	MLST8	ENST00000397124.5	1691	9	-5	-19	5	0	multi-exon	FALSE	canonical	1	76400	junction_1	249080.45327852905	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	196	1176	40.0	-2	True	AATAAA	-36
PB.1249.3	chr1	-	4007	1	genic	AL390728.4_AL390728.5	novel	NA	NA	NA	NA	-15	3826	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	111	336	222	557	90.0	-24	False	NA	NA
PB.1249.2	chr1	-	1641	5	novel_not_in_catalog	AL390728.4	novel	1465	4	NA	NA	-24	-1	any annotated donor/acceptor	FALSE	canonical	1	30058	junction_4	185381.0213715255	NA	0	NA	TRUE	NA	NA	NA	B	coding	424	1275	241	1515	60.0	-33	False	TATAAA	-30
PB.1249.1	chr1	-	3458	4	novel_not_in_catalog	AL390728.4	novel	1465	4	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	114084	junction_3	148779.11758785983	NA	1	NA	TRUE	NA	NA	NA	B	coding	388	1167	2166	3332	60.0	-13	True	TATAAA	-30
PB.3290.6	chr14	+	2419	2	novel_in_catalog	APEX1	novel	1437	5	NA	NA	1	1	intron_retention	FALSE	canonical	1	2834656	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-6	True	AATAAA	-16
PB.3301.49	chr14	-	2727	8	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1405	-2	intron_retention	FALSE	canonical	1	43514	junction_7	603027.3360285027	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	1526	2443	40.0	5374	False	AATAAA	-17
PB.3301.48	chr14	-	2888	10	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	183	junction_9	642496.7133231976	NA	3	NA	TRUE	NA	NA	NA	C	coding	293	882	1723	2604	40.0	14	True	AATAAA	-17
PB.6799.8	chr2	+	3623	11	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	3043	junction_1	265506.8576737708	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	274	2388	20.0	-17	True	AATAAA	-20
PB.8798.1	chr4	+	4183	26	novel_in_catalog	POLR2B	novel	608	4	NA	NA	-69	3	combination_of_known_junctions	FALSE	canonical	1	14620	junction_1	253612.91805813363	NA	1	NA	TRUE	NA	NA	NA	C	coding	1174	3525	486	4010	15.0	-1243	False	AATAAA	-19
PB.4776.1	chr17	-	2294	7	full-splice_match	ZNF18	ENST00000580306.6	2330	7	35	1	0	-1	multi-exon	FALSE	canonical	1	17388	junction_6	28574.868177007105	NA	0	NA	TRUE	NA	NA	NA	A	coding	549	1650	128	1777	10.0	-12	True	AATAAA	-25
PB.3301.41	chr14	-	2564	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	213933	junction_7	572488.4158707929	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	1395	2276	40.0	15	True	AATAAA	-21
PB.3301.40	chr14	-	2604	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	213933	junction_7	632180.6797852449	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	1396	2316	40.0	14	True	AATAAA	-21
PB.3301.43	chr14	-	1358	9	full-splice_match	HNRNPC	ENST00000553300.5	1375	9	16	1	-1	-1	multi-exon	FALSE	canonical	1	233847	junction_6	855594.4623457716	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	192	1073	45.0	15	True	AATAAA	-18
PB.3290.4	chr14	+	1677	4	full-splice_match	APEX1	ENST00000553555.5	1603	4	-35	-39	0	1	multi-exon	FALSE	canonical	1	2664263	junction_1	199769.24443133548	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	456	1412	5.0	0	True	AATAAA	-21
PB.3301.45	chr14	-	2804	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	213933	junction_6	428069.7237671947	NA	6	NA	TRUE	NA	NA	NA	C	coding	244	735	1395	2129	45.0	15	True	AATAAA	-18
PB.3301.44	chr14	-	1385	8	full-splice_match	HNRNPC	ENST00000557201.5	1371	8	-15	1	2	-1	multi-exon	FALSE	canonical	1	120000	junction_7	658105.5533324888	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	180	1100	45.0	1	True	AATAAA	-18
PB.3301.47	chr14	-	1865	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	2	-1	intron_retention	FALSE	canonical	1	233847	junction_6	892063.7360177452	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	699	1580	45.0	1	True	AATAAA	-18
PB.3301.46	chr14	-	2069	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	213933	junction_7	633997.7856120142	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	903	1784	45.0	14	True	AATAAA	-18
PB.6351.19	chr2	-	2246	17	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-26	14426	intron_retention	FALSE	canonical	1	3371	junction_14	90149.08357407797	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1824	421	2244	65.0	-16	True	AAGAAA	-23
PB.145.36	chr1	-	2052	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-3	953	combination_of_known_junctions	FALSE	canonical	1	222513	junction_12	333508.870958761	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	233	1894	15.0	-20	True	AATAAA	-18
PB.8537.3	chr3	+	2486	19	novel_in_catalog	USP13	novel	8323	21	NA	NA	51	-213	no_combination_of_known_junctions	FALSE	canonical	1	1014	junction_6	44058.009731559294	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	1001	2434	85.0	-66	False	TATAAA	-39
PB.1957.5	chr11	+	3770	5	full-splice_match	FAM111A	ENST00000420244.5	3780	5	12	-2	0	0	multi-exon	FALSE	canonical	1	34873	junction_2	95937.29705385701	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	403	2238	25.0	-2	True	NA	NA
PB.1957.4	chr11	+	2690	6	novel_in_catalog	FAM111A	novel	6189	5	NA	NA	-1	359	combination_of_known_junctions	FALSE	canonical	1	34494	junction_1	89717.02010209658	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	909	1782	2690	70.0	-4	True	NA	NA
PB.1957.7	chr11	+	3720	5	novel_not_in_catalog	FAM111A	novel	6189	5	NA	NA	399	0	any annotated donor/acceptor	FALSE	canonical	1	22734	junction_2	100716.8425224277	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	353	2188	25.0	-2	True	NA	NA
PB.1957.6	chr11	+	3845	4	novel_in_catalog	FAM111A	novel	6189	5	NA	NA	58	392	intron_retention	FALSE	canonical	1	66307	junction_1	97977.02596470709	NA	12	NA	TRUE	NA	NA	NA	C	coding	314	942	2904	3845	75.0	-1945	False	NA	NA
PB.1957.1	chr11	+	6300	4	novel_in_catalog	FAM111A	novel	6189	5	NA	NA	-19	0	intron_retention	FALSE	canonical	1	34494	junction_1	106048.89849812994	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	2933	4768	25.0	-33	True	NA	NA
PB.981.7	chr1	+	5604	21	novel_in_catalog	SMG7	novel	1190	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	19346	junction_1	111142.52276301586	NA	5	1	TRUE	NA	NA	NA	C	coding	1049	3150	200	3349	30.0	9	True	ATTAAA	-14
PB.1957.3	chr11	+	3739	4	novel_in_catalog	FAM111A	novel	6189	5	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	7404	junction_2	116498.01105884454	NA	6	2	TRUE	NA	NA	NA	C	coding	611	1836	375	2210	30.0	-4	True	NA	NA
PB.1957.2	chr11	+	3908	6	novel_not_in_catalog	FAM111A	novel	6189	5	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	2365	junction_2	106741.8539385559	NA	4	NA	TRUE	NA	NA	NA	C	coding	611	1836	541	2376	25.0	-4	True	NA	NA
PB.5103.2	chr17	-	2986	10	full-splice_match	PPP1R9B	ENST00000612501.1	4167	10	1180	1	1180	-1	multi-exon	FALSE	canonical	1	718282	junction_6	245388.71794313975	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	366	1391	0.0	1684	False	CATAAA	-15
PB.981.8	chr1	+	3817	22	full-splice_match	SMG7	ENST00000515829.6	5629	22	-38	1850	-11	77	multi-exon	FALSE	canonical	1	129392	junction_1	99709.78912677137	NA	1	NA	TRUE	NA	NA	NA	C	coding	1091	3276	133	3408	20.0	-18	True	AATAAA	-14
PB.5103.1	chr17	-	2715	10	novel_not_in_catalog	PPP1R9B	novel	4167	10	NA	NA	2042	4	any annotated donor/acceptor	FALSE	canonical	1	412	junction_9	385907.18217438995	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	90	1115	10.0	2546	False	CATAAA	-20
PB.1957.9	chr11	+	3518	4	full-splice_match	FAM111A	ENST00000361723.7	3592	4	75	-1	-8	1	multi-exon	FALSE	canonical	1	63435	junction_1	98705.75329848925	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	150	1985	20.0	-8	True	NA	NA
PB.1957.8	chr11	+	3580	3	novel_in_catalog	FAM111A	novel	6189	5	NA	NA	308	0	no_combination_of_known_junctions	FALSE	canonical	1	1477	junction_1	138593.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	215	2050	30.0	-7	True	NA	NA
PB.10844.1	chr7	-	3148	24	full-splice_match	COPG2	ENST00000425248.5	3134	24	-16	2	-16	-2	multi-exon	FALSE	canonical	0	0	junction_4	168810.79609028317	NA	2	NA	TRUE	NA	NA	NA	C	coding	871	2616	97	2712	30.0	-28	False	AATAAA	-18
PB.2005.1	chr11	+	2034	11	full-splice_match	TAF6L	ENST00000294168.7	2116	11	79	3	15	-3	multi-exon	FALSE	canonical	1	114085	junction_1	34078.54756940207	NA	0	NA	TRUE	NA	NA	NA	A	coding	622	1869	123	1991	25.0	-14	True	AATAAA	-13
PB.10844.2	chr7	-	2841	24	full-splice_match	COPG2	ENST00000425248.5	3134	24	11	282	11	4	multi-exon	FALSE	canonical	0	0	junction_4	168810.79609028317	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	70	2685	10.0	-1	True	ATTAAA	-36
PB.145.37	chr1	-	2567	10	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	-3	3115	any annotated donor/acceptor	FALSE	canonical	1	20726	junction_1	410398.5626718688	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	233	1267	15.0	-20	True	NA	NA
PB.11536.13	chr9	-	2885	12	full-splice_match	GNE	ENST00000377902.5	2565	12	28	-348	-23	101	multi-exon	FALSE	canonical	1	78734	junction_11	41011.574087573084	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	194	2362	55.0	34	False	NA	NA
PB.11536.10	chr9	-	3218	12	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	-22	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	75522.40008344303	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	164	2155	20.0	-5	True	AATAAA	-14
PB.8798.8	chr4	+	3966	26	novel_not_in_catalog	POLR2B	novel	608	4	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	1639	junction_23	298581.9213474145	NA	0	NA	TRUE	NA	NA	NA	C	coding	1225	3678	119	3796	15.0	4	True	AATAAA	-16
PB.11536.14	chr9	-	2689	12	full-splice_match	GNE	ENST00000377902.5	2565	12	1	-125	1	87	multi-exon	FALSE	canonical	1	78734	junction_11	41011.574087573084	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	221	2389	30.0	7	False	AATAGA	-17
PB.8410.2	chr3	-	3011	8	full-splice_match	RAB6B	ENST00000285208.8	5526	8	-13	2528	7	981	multi-exon	FALSE	canonical	1	204716	junction_1	26856.831984523007	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	364	990	30.0	0	True	AAGAAA	-15
PB.7890.3	chr22	-	2596	14	full-splice_match	LMF2	ENST00000474879.6	2582	14	-14	0	-14	0	multi-exon	FALSE	canonical	1	253522	junction_13	146201.36929898916	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	31	2154	0.0	-12	True	AATAAA	-20
PB.7113.6	chr2	-	2083	12	full-splice_match	STK25	ENST00000316586.8	4619	12	110	2426	0	-50	multi-exon	FALSE	canonical	1	239768	junction_11	348224.2066997251	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	241	1521	40.0	1	True	AAGAAA	-21
PB.7113.5	chr2	-	2938	11	novel_in_catalog	STK25	novel	4619	12	NA	NA	1	2	intron_retention	FALSE	canonical	1	239768	junction_10	353882.67071129667	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	1554	2291	5.0	-11	True	AATAAA	-20
PB.7113.4	chr2	-	2431	12	full-splice_match	STK25	ENST00000403346.7	2210	12	75	-296	-6	-14	multi-exon	FALSE	canonical	1	76219	junction_11	384383.9966620199	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	210	1490	15.0	-30	True	AATAAA	-26
PB.7113.3	chr2	-	2362	11	full-splice_match	STK25	ENST00000535007.5	2459	11	91	6	3	-6	multi-exon	FALSE	canonical	1	51501	junction_10	388776.1090350203	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	415	1413	5.0	-21	True	AATAAA	-34
PB.3846.1	chr15	+	1694	10	full-splice_match	SQOR	ENST00000260324.11	2003	10	294	15	294	-1	multi-exon	FALSE	canonical	1	394995	junction_1	77778.62986104685	NA	0	NA	TRUE	NA	NA	NA	A	coding	450	1353	93	1445	35.0	-35	True	AATAAA	-42
PB.7113.1	chr2	-	3237	11	novel_in_catalog	STK25	novel	4619	12	NA	NA	0	2	intron_retention	FALSE	canonical	1	239768	junction_10	353882.67071129667	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	1543	2280	15.0	0	True	AATAAA	-42
PB.11284.13	chr8	-	4077	12	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-53	no_combination_of_known_junctions	FALSE	canonical	1	9070	junction_3	536541.1132792702	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	737	1480	30.0	-1	True	AGTAAA	-10
PB.8313.10	chr3	-	3365	7	novel_in_catalog	IGSF11	novel	3525	8	NA	NA	-41	0	no_combination_of_known_junctions	FALSE	canonical	1	674	junction_3	14010.169683324879	NA	3	NA	TRUE	NA	NA	NA	C	coding	320	963	519	1481	50.0	12	True	AATAAA	-12
PB.7113.9	chr2	-	2075	12	full-splice_match	STK25	ENST00000403346.7	2210	12	52	83	-12	-50	multi-exon	FALSE	canonical	1	76219	junction_11	384383.9966620199	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	233	1513	40.0	56	False	AAGAAA	-21
PB.3254.2	chr13	-	1856	2	full-splice_match	IRS2	ENST00000375856.4	8138	2	3735	2547	3735	-2547	multi-exon	FALSE	canonical	1	254072	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	3	797	85.0	5035	False	AATAAA	-33
PB.4748.2	chr17	+	1773	11	full-splice_match	WRAP53	ENST00000396463.6	1905	11	130	2	-26	-1	multi-exon	FALSE	canonical	1	139596	junction_1	27351.48604079859	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	113	1759	15.0	-26	True	TATAAA	-14
PB.4748.3	chr17	+	2342	10	novel_in_catalog	WRAP53	novel	1818	11	NA	NA	-40	0	intron_retention	FALSE	canonical	1	139596	junction_1	26970.287486623336	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	127	1338	15.0	-40	True	TATAAA	-15
PB.4748.4	chr17	+	1864	10	full-splice_match	WRAP53	ENST00000316024.9	4011	10	2145	2	-31	-1	multi-exon	FALSE	canonical	1	168546	junction_6	20411.46264017136	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	204	1850	15.0	-31	True	TATAAA	-14
PB.4896.17	chr17	+	3972	12	full-splice_match	ZNF207	ENST00000394670.8	13781	12	59	9750	1	1685	multi-exon	FALSE	canonical	1	763986	junction_5	382073.3821785055	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	111	1595	65.0	19	True	NA	NA
PB.7618.9	chr22	+	2006	7	novel_in_catalog	TANGO2	novel	745	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	18970	junction_5	110486.63250881931	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	182	511	10.0	-7	True	AATAAA	-23
PB.7618.8	chr22	+	2194	8	novel_not_in_catalog	TANGO2	novel	745	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3331	junction_5	105583.40114771055	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	182	511	10.0	-7	True	AATAAA	-23
PB.145.35	chr1	-	2065	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-5	954	combination_of_known_junctions	FALSE	canonical	1	43382	junction_12	372260.06828209345	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	245	1906	15.0	-6	True	AATAAA	-19
PB.197.13	chr1	+	1331	5	full-splice_match	HMGN2	ENST00000466194.1	952	5	25	-404	25	-1	multi-exon	FALSE	canonical	1	3908	junction_4	127249.26797530113	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-21
PB.1467.9	chr10	-	1815	4	novel_not_in_catalog	DNAJC9	novel	3032	5	NA	NA	-3782	-1502	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	641199.9970889651	NA	1	1	TRUE	NA	NA	NA	B	coding	137	414	163	576	30.0	-26	True	AATAAA	-25
PB.2166.2	chr11	+	3417	2	full-splice_match	NEU3	ENST00000534628.1	746	2	-33	-2638	-14	2638	multi-exon	FALSE	canonical	1	62841	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	181	663	85.0	-22	True	NA	NA
PB.2166.3	chr11	+	4730	4	novel_not_in_catalog	NEU3	novel	6728	3	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	938	junction_3	29347.737028034488	NA	3	NA	TRUE	NA	NA	NA	C	coding	174	525	159	683	10.0	0	True	AATAAA	-17
PB.2166.4	chr11	+	5712	2	full-splice_match	NEU3	ENST00000532963.1	1643	2	-1	-4068	-1	-5	multi-exon	FALSE	canonical	1	8579	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	342	1029	274	1302	10.0	0	True	AATAAA	-13
PB.1467.8	chr10	-	2583	3	full-splice_match	MRPS16	ENST00000372945.7	2634	3	49	2	-10	-2	multi-exon	FALSE	canonical	1	1270725	junction_2	82025.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	163	576	35.0	-26	True	AATAAA	-24
PB.11525.1	chr9	-	2509	11	novel_in_catalog	ARHGEF39	novel	4498	12	NA	NA	-32	-1	intron_retention	FALSE	canonical	1	2555	junction_2	36576.313811126456	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	56	1063	20.0	-33	True	NA	NA
PB.8461.37	chr3	-	2890	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	73	-860	-3	860	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	268	1470	50.0	-4	True	NA	NA
PB.11566.1	chr9	-	1925	1	intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-18
PB.3667.20	chr14	+	1653	13	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	460	junction_6	238914.80541123336	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	403	1527	25.0	4	True	AATAAA	-20
PB.3667.21	chr14	+	1548	12	full-splice_match	PPP2R5C	ENST00000445439.7	1526	12	-25	3	1	-2	multi-exon	FALSE	canonical	1	460	junction_5	234407.84673038754	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	104	1423	25.0	4	True	AATAAA	-19
PB.3667.22	chr14	+	4089	14	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	-85	46	no_combination_of_known_junctions	FALSE	canonical	1	460	junction_5	224568.42546851566	NA	3	NA	TRUE	NA	NA	NA	C	coding	500	1503	128	1630	55.0	0	True	AATAAA	-12
PB.3667.23	chr14	+	3944	13	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	-51	52	no_combination_of_known_junctions	FALSE	canonical	1	460	junction_5	225924.79301398003	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	94	1479	40.0	-29	True	AATAAA	-18
PB.3667.24	chr14	+	3705	13	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	-30	0	no_combination_of_known_junctions	FALSE	canonical	1	460	junction_5	225924.79301398003	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	73	1458	20.0	-8	True	AATAAA	-22
PB.3667.25	chr14	+	1439	12	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	7	-1	no_combination_of_known_junctions	FALSE	canonical	1	460	junction_5	235563.22463487415	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	36	1313	25.0	0	True	AATAAA	-20
PB.6679.5	chr2	+	3724	10	full-splice_match	LIMS1	ENST00000544547.5	4461	10	106	631	5	-631	multi-exon	FALSE	canonical	1	2303	junction_2	273977.36567087186	NA	4	NA	TRUE	NA	NA	NA	C	coding	330	993	124	1116	80.0	-9	True	NA	NA
PB.6679.4	chr2	+	3914	10	full-splice_match	LIMS1	ENST00000544547.5	4461	10	84	463	-17	-463	multi-exon	FALSE	canonical	1	2303	junction_2	273977.36567087186	NA	4	NA	TRUE	NA	NA	NA	C	coding	330	993	146	1138	80.0	-31	True	NA	NA
PB.4574.2	chr16	-	3028	4	full-splice_match	SDR42E1	ENST00000534209.1	871	4	-52	-2105	-29	2049	multi-exon	FALSE	canonical	1	10563	junction_3	5960.634436776751	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	386	1567	25.0	-53	False	NA	NA
PB.4574.1	chr16	-	2743	3	full-splice_match	SDR42E1	ENST00000328945.6	11566	3	29	8794	6	2050	multi-exon	FALSE	canonical	1	14625	junction_2	5259.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	100	1281	20.0	5	True	NA	NA
PB.6679.8	chr2	+	3801	10	full-splice_match	LIMS1	ENST00000409441.5	1627	10	-15	-2159	0	-631	multi-exon	FALSE	canonical	1	2303	junction_2	283498.7044548098	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	105	1193	80.0	0	True	NA	NA
PB.7618.1	chr22	+	2146	7	novel_in_catalog	TANGO2	novel	745	5	NA	NA	4	0	intron_retention	FALSE	canonical	1	18970	junction_5	117269.67364974061	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	199	651	10.0	-68	False	AATAAA	-23
PB.10250.1	chr6	+	2686	4	full-splice_match	AIG1	ENST00000494282.6	3393	4	-61	768	-13	-768	multi-exon	FALSE	canonical	1	63422	junction_3	186141.63641760062	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	87	500	30.0	-62	False	AATAAA	-18
PB.6198.3	chr19	+	4586	4	full-splice_match	ZNF765	ENST00000396408.7	4569	4	-16	-1	-10	1	multi-exon	FALSE	canonical	1	440	junction_2	22157.865841878065	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	134	1705	20.0	-15	True	NA	NA
PB.6198.2	chr19	+	3281	4	full-splice_match	ZNF765	ENST00000396408.7	4569	4	-17	1305	-11	-1305	multi-exon	FALSE	canonical	1	440	junction_2	22157.865841878065	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	135	1706	30.0	-16	True	AATAAA	-18
PB.6198.1	chr19	+	4153	5	novel_not_in_catalog	ZNF765	novel	541	3	NA	NA	-11	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	22514.60563723025	NA	2	1	TRUE	NA	NA	NA	C	coding	523	1572	135	1706	20.0	-16	True	NA	NA
PB.7684.3	chr22	+	2351	17	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	106424	junction_8	722573.0255536865	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	70	1989	5.0	0	True	AATAAA	-23
PB.3222.8	chr13	-	5850	31	full-splice_match	ABCC4	ENST00000645237.1	5856	31	-1	7	-1	-1	multi-exon	FALSE	canonical	1	108750	junction_30	56250.81088581944	NA	1	NA	TRUE	NA	NA	NA	C	coding	1325	3978	134	4111	25.0	-11	True	AATAAA	-18
PB.2272.1	chr11	-	6115	15	incomplete-splice_match	ARHGAP20	ENST00000260283.8	6189	16	292	-6	292	6	5prime_fragment	FALSE	canonical	1	8632	junction_14	3570.8334282697897	NA	2	NA	TRUE	NA	NA	NA	A	coding	1188	3567	215	3781	25.0	0	True	AATAAA	-33
PB.6198.5	chr19	+	3355	8	novel_not_in_catalog	ZNF765	novel	541	3	NA	NA	2	-1	intron_retention	TRUE	non_canonical	0	0	junction_7	18773.38216731338	NA	5	NA	TRUE	NA	NA	NA	C	coding	100	303	981	1283	35.0	-3	True	NA	NA
PB.6198.4	chr19	+	4014	4	novel_not_in_catalog	ZNF765	novel	541	3	NA	NA	1	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	25072.93075986309	NA	2	1	TRUE	NA	NA	NA	C	coding	469	1410	158	1567	20.0	-4	True	NA	NA
PB.7684.8	chr22	+	2331	16	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-3	1	no_combination_of_known_junctions	FALSE	canonical	1	1507	junction_8	719476.9561484881	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	68	1969	5.0	2	True	AATAAA	-23
PB.3222.5	chr13	-	6135	33	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	584	junction_32	82013.95099784758	NA	7	NA	TRUE	NA	NA	NA	C	coding	1282	3849	547	4395	20.0	-29	True	AATAAA	-19
PB.3222.6	chr13	-	6022	32	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	9237	junction_31	73497.09327741423	NA	2	NA	TRUE	NA	NA	NA	C	coding	1282	3849	434	4282	20.0	-29	True	AATAAA	-19
PB.3222.1	chr13	-	6137	33	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	356	junction_30	83869.93721749296	NA	0	NA	TRUE	NA	NA	NA	C	coding	1282	3849	546	4394	20.0	-15	True	AATAAA	-22
PB.3222.2	chr13	-	5971	32	novel_in_catalog	ABCC4	novel	5856	31	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	584	junction_31	76322.53117650349	NA	1	NA	TRUE	NA	NA	NA	C	coding	1338	4017	212	4228	20.0	-15	True	AATAAA	-22
PB.3222.3	chr13	-	5948	32	novel_not_in_catalog	ABCC4	novel	5856	31	NA	NA	-1	-3	any annotated donor/acceptor	TRUE	canonical	1	5619	junction_3	76964.07368457617	NA	19	NA	TRUE	NA	NA	NA	C	coding	1266	3801	121	3921	20.0	2	True	AATAAA	-22
PB.9398.4	chr5	-	2513	10	novel_not_in_catalog	PGGT1B	novel	9545	9	NA	NA	4	1562	any annotated donor/acceptor	FALSE	canonical	1	5347	junction_1	64855.75285200227	NA	11	1	TRUE	NA	NA	NA	C	coding	354	1065	11	1075	35.0	-3	True	AATAAA	-35
PB.11598.2	chr9	-	3651	2	full-splice_match	KLF9	ENST00000377126.3	5175	2	1494	30	1494	-30	multi-exon	FALSE	canonical	1	277494	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	152	459	44	502	70.0	8459	False	NA	NA
PB.10475.2	chr7	-	3584	5	novel_not_in_catalog	KBTBD2	novel	3745	4	NA	NA	279	-1	intron_retention	FALSE	canonical	1	7044	junction_4	152069.90537989428	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	541	2412	15.0	-8	True	AATAAA	-14
PB.11598.4	chr9	-	3133	2	novel_not_in_catalog	KLF9	novel	5175	2	NA	NA	669	-32	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-4	True	NA	NA
PB.1450.3	chr10	-	2932	4	full-splice_match	LRRC20	ENST00000395010.5	2959	4	21	6	-3	0	multi-exon	FALSE	canonical	1	13692	junction_3	52320.596966098245	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	207	554	5.0	-6	True	AATAAA	-16
PB.1450.2	chr10	-	2913	4	full-splice_match	LRRC20	ENST00000357631.6	2906	4	-4	-3	-4	0	multi-exon	FALSE	canonical	1	23167	junction_1	39639.59825169215	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	146	532	5.0	-7	True	AATAAA	-19
PB.1450.1	chr10	-	3095	5	full-splice_match	LRRC20	ENST00000446961.2	663	5	-17	-2415	9	0	multi-exon	FALSE	canonical	1	61871	junction_4	28276.788965289183	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	157	711	10.0	-18	False	AATAAA	-22
PB.7909.5	chr3	+	5875	12	full-splice_match	EDEM1	ENST00000256497.8	6146	12	15	256	15	-256	multi-exon	FALSE	canonical	1	218361	junction_1	108025.90711950415	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	209	2092	55.0	-9395	False	AAGAAA	-16
PB.10475.7	chr7	-	2677	4	full-splice_match	KBTBD2	ENST00000304056.8	3745	4	207	861	207	-861	multi-exon	FALSE	canonical	1	124035	junction_3	94878.03327547543	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	494	2365	20.0	-11	True	AAAAAG	-12
PB.12058.4	chrX	-	1984	16	full-splice_match	SLC38A5	ENST00000595796.5	2659	16	667	8	47	0	multi-exon	FALSE	canonical	1	193940	junction_15	134497.38363783224	NA	2	NA	TRUE	NA	NA	NA	C	coding	472	1419	178	1596	15.0	744	False	AATAAA	-15
PB.12058.1	chrX	-	1891	16	novel_in_catalog	SLC38A5	novel	2659	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	100414	junction_15	151310.9690421095	NA	4	1	TRUE	NA	NA	NA	C	coding	472	1419	79	1497	15.0	34	True	AATAAA	-21
PB.12058.2	chrX	-	2497	14	novel_in_catalog	SLC38A5	novel	2659	16	NA	NA	146	0	intron_retention	FALSE	canonical	1	193940	junction_13	143766.72978954032	NA	3	NA	TRUE	NA	NA	NA	C	coding	383	1152	958	2109	15.0	1	True	AATAAA	-15
PB.12058.3	chrX	-	2106	15	novel_in_catalog	SLC38A5	novel	2659	16	NA	NA	146	0	intron_retention	FALSE	canonical	1	193940	junction_14	138846.71986412033	NA	3	1	TRUE	NA	NA	NA	C	coding	323	972	79	1050	15.0	1	True	AATAAA	-15
PB.8553.2	chr3	+	6567	32	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	-42	-1	any annotated donor/acceptor	FALSE	canonical	1	53	junction_1	76064.57780998347	NA	3	NA	TRUE	NA	NA	NA	C	coding	1422	4269	260	4528	5.0	-30	True	AATAAA	-15
PB.8553.3	chr3	+	6284	30	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	-42	0	any annotated donor/acceptor	FALSE	canonical	1	2706	junction_13	79149.43239754628	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	2184	4244	5.0	-30	True	AATAAA	-16
PB.8553.1	chr3	+	6510	31	full-splice_match	YEATS2	ENST00000305135.9	6506	31	-4	0	-4	0	multi-exon	FALSE	canonical	1	97090	junction_1	56935.805509714184	NA	1	NA	TRUE	NA	NA	NA	C	coding	1422	4269	200	4468	15.0	8	True	AATAAA	-18
PB.8553.6	chr3	+	2937	15	incomplete-splice_match	YEATS2	ENST00000305135.9	6506	31	-24	49575	-24	-30436	3prime_fragment	FALSE	canonical	1	97090	junction_1	48481.21188498421	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	220	2181	85.0	-12	True	NA	NA
PB.8553.7	chr3	+	3685	22	novel_in_catalog	YEATS2	novel	6506	31	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	1	24653	junction_21	69926.12834278283	NA	0	NA	TRUE	NA	NA	NA	C	coding	1033	3102	216	3317	15.0	-8	True	AATAAA	-20
PB.8553.4	chr3	+	6717	31	full-splice_match	YEATS2	ENST00000305135.9	6506	31	-26	-185	-26	185	multi-exon	FALSE	canonical	1	97090	junction_1	56935.805509714184	NA	1	NA	TRUE	NA	NA	NA	C	coding	1422	4269	222	4490	40.0	-14	True	CATAAA	-19
PB.8553.5	chr3	+	2471	13	incomplete-splice_match	YEATS2	ENST00000305135.9	6506	31	-26	53066	-26	-33927	3prime_fragment	FALSE	canonical	1	97090	junction_1	51447.518704069254	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	222	1934	80.0	-14	True	NA	NA
PB.9874.11	chr6	-	3609	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	386632	junction_23	528713.5266044568	NA	2	NA	TRUE	NA	NA	NA	C	coding	1077	3234	274	3507	25.0	1	True	AATAAA	-30
PB.8553.8	chr3	+	6408	30	novel_in_catalog	YEATS2	novel	6506	31	NA	NA	-17	-1	no_combination_of_known_junctions	FALSE	canonical	1	6389	junction_7	70158.42715055826	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	1331	4369	5.0	-5	True	AATAAA	-15
PB.8553.9	chr3	+	6607	32	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	2168	junction_2	81835.93665317325	NA	0	NA	TRUE	NA	NA	NA	C	coding	1370	4113	455	4567	5.0	-1	True	AATAAA	-16
PB.4794.3	chr17	-	3869	6	full-splice_match	ZNF624	ENST00000311331.11	4241	6	9	363	-6	-354	multi-exon	FALSE	canonical	1	17385	junction_5	4553.320616868528	NA	1	NA	TRUE	NA	NA	NA	C	coding	865	2598	84	2681	5.0	-18	True	NA	NA
PB.4794.2	chr17	-	4443	6	novel_in_catalog	ZNF624	novel	4241	6	NA	NA	-2	1	intron_retention	FALSE	canonical	1	4528	junction_5	9369.121666410358	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2598	294	2891	10.0	-32	True	NA	NA
PB.4794.1	chr17	-	4238	6	full-splice_match	ZNF624	ENST00000311331.11	4241	6	6	-3	6	3	multi-exon	FALSE	canonical	1	17385	junction_5	4553.320616868528	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2598	87	2684	10.0	-21	True	NA	NA
PB.9874.10	chr6	-	3639	25	full-splice_match	BAG6	ENST00000375976.8	3644	25	4	1	-3	0	multi-exon	FALSE	canonical	1	436020	junction_24	503312.52486952866	NA	3	NA	TRUE	NA	NA	NA	C	coding	1126	3381	157	3537	25.0	-1	True	AATAAA	-30
PB.8313.11	chr3	-	1958	7	novel_not_in_catalog	IGSF11	novel	3525	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	198	junction_2	10671.27846136535	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	307	1023	50.0	59	False	ATTAAA	-17
PB.9874.13	chr6	-	3544	24	full-splice_match	BAG6	ENST00000362049.10	3626	24	43	39	-9	-39	multi-exon	FALSE	canonical	1	559348	junction_10	512043.56866726174	NA	2	NA	TRUE	NA	NA	NA	C	coding	1077	3234	248	3481	50.0	3	True	NA	NA
PB.9874.12	chr6	-	3606	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	64467	junction_24	576735.8726494918	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	163	3504	25.0	-1	True	AATAAA	-30
PB.6665.1	chr2	+	1436	9	full-splice_match	IL1R2	ENST00000393414.6	1405	9	-34	3	-34	0	multi-exon	FALSE	canonical	1	11140	junction_1	25352.32083927426	NA	0	NA	TRUE	NA	NA	NA	A	coding	390	1173	242	1414	40.0	-11	True	AATAAA	-17
PB.4549.7	chr16	-	4754	14	full-splice_match	RFWD3	ENST00000571750.5	3033	14	-4	-1717	0	-318	multi-exon	FALSE	canonical	1	28731	junction_12	92425.33874193879	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	214	2538	85.0	-16	True	NA	NA
PB.4549.5	chr16	-	5061	14	novel_not_in_catalog	RFWD3	novel	4957	13	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	188	junction_10	111806.04194204159	NA	23	1	TRUE	NA	NA	NA	C	coding	770	2313	221	2533	20.0	-23	True	AATAAA	-14
PB.11542.16	chr9	+	3844	2	full-splice_match	EBLN3P	ENST00000631093.1	636	2	9	-3217	9	-114	multi-exon	FALSE	canonical	1	29491	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	47	144	178	321	20.0	0	True	NA	NA
PB.4549.2	chr16	-	5069	14	full-splice_match	RFWD3	ENST00000571750.5	3033	14	-6	-2030	-2	-5	multi-exon	FALSE	canonical	1	28731	junction_12	92425.33874193879	NA	3	NA	TRUE	NA	NA	NA	C	coding	774	2325	216	2540	15.0	-18	True	AATAAA	-15
PB.4549.1	chr16	-	4953	13	full-splice_match	RFWD3	ENST00000361070.8	4957	13	0	4	0	-4	multi-exon	FALSE	canonical	1	73745	junction_12	70780.77538482034	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	99	2423	15.0	-23	True	AATAAA	-16
PB.6166.1	chr19	-	1310	3	full-splice_match	KLK1	ENST00000596300.1	912	3	-270	-128	-270	5	multi-exon	FALSE	canonical	1	250647	junction_1	40965.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	216	651	609	1259	15.0	5962	False	AGTAAA	-21
PB.4549.9	chr16	-	3421	7	novel_in_catalog	RFWD3	novel	4957	13	NA	NA	202	-318	no_combination_of_known_junctions	FALSE	canonical	1	5856	junction_6	106378.10301414896	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	237	1205	85.0	NA	False	NA	NA
PB.4549.8	chr16	-	4639	13	full-splice_match	RFWD3	ENST00000361070.8	4957	13	0	318	0	-318	multi-exon	FALSE	canonical	1	73745	junction_12	70780.77538482034	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	99	2423	85.0	-23	True	NA	NA
PB.1525.2	chr10	+	2393	2	full-splice_match	IFIT3	ENST00000371818.8	2496	2	101	2	101	-2	multi-exon	FALSE	canonical	1	237580	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	80	1552	30.0	-4	True	AATAAA	-24
PB.1525.3	chr10	+	3096	1	novel_in_catalog	IFIT3	novel	2496	2	NA	NA	103	-9879	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	NA	NA
PB.11122.1	chr8	+	3004	17	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	17315	junction_16	79040.84821013336	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	59	2605	30.0	-3	True	AATAAA	-11
PB.1525.1	chr10	+	1979	2	full-splice_match	IFIT3	ENST00000371818.8	2496	2	103	414	103	-414	multi-exon	FALSE	canonical	1	237580	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	C	coding	490	1473	78	1550	100.0	-2	True	NA	NA
PB.1525.6	chr10	+	2114	3	novel_not_in_catalog	IFIT3	novel	2496	2	NA	NA	45	-414	any annotated donor/acceptor	FALSE	canonical	1	1974	junction_1	1630.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	369	1685	100.0	0	True	NA	NA
PB.1525.7	chr10	+	2118	2	full-splice_match	IFIT3	ENST00000371811.4	2455	2	45	292	45	-292	multi-exon	FALSE	canonical	1	168175	junction_1	0.0	NA	4	1	TRUE	NA	NA	NA	C	coding	490	1473	95	1567	20.0	0	True	AATAAA	-18
PB.1525.4	chr10	+	1992	2	full-splice_match	IFIT3	ENST00000371811.4	2455	2	49	414	49	-414	multi-exon	FALSE	canonical	1	168175	junction_1	0.0	NA	23	NA	TRUE	NA	NA	NA	C	coding	490	1473	91	1563	100.0	4	True	NA	NA
PB.1525.5	chr10	+	2526	3	novel_not_in_catalog	IFIT3	novel	2496	2	NA	NA	45	-2	any annotated donor/acceptor	FALSE	canonical	1	1974	junction_1	1630.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	369	1685	30.0	0	True	AATAAA	-24
PB.1525.8	chr10	+	1833	2	full-splice_match	IFIT3	ENST00000371811.4	2455	2	45	577	45	-577	multi-exon	FALSE	canonical	1	168175	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	95	1567	65.0	0	True	NA	NA
PB.11122.8	chr8	+	3793	18	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	-2	1	intron_retention	FALSE	canonical	1	9318	junction_13	84829.28153459005	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	26	2179	20.0	-4	True	AATAAA	-14
PB.10626.1	chr7	+	875	3	full-splice_match	HSPB1	ENST00000248553.6	909	3	35	-1	35	1	multi-exon	FALSE	canonical	1	6661333	junction_2	269752.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	205	618	135	752	10.0	-1639	False	AATAAA	-21
PB.12165.1	chrX	-	1758	6	full-splice_match	HMGN5	ENST00000430960.5	578	6	-14	-1166	-9	-187	multi-exon	TRUE	canonical	1	180653	junction_5	53983.40538943426	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	149	997	20.0	25	False	NA	NA
PB.7890.8	chr22	-	2559	13	novel_not_in_catalog	LMF2	novel	2582	14	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	285798.46131499874	NA	11	2	TRUE	NA	NA	NA	C	coding	431	1296	824	2119	0.0	-9	True	AATAAA	-18
PB.12165.2	chrX	-	1596	6	full-splice_match	HMGN5	ENST00000430960.5	578	6	-34	-984	-29	-369	multi-exon	FALSE	canonical	1	180653	junction_5	53983.40538943426	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	169	1017	15.0	5	True	AATAAA	-15
PB.7909.8	chr3	+	5731	13	novel_not_in_catalog	EDEM1	novel	978	8	NA	NA	-13	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154176.319591852	NA	7	1	TRUE	NA	NA	NA	C	coding	529	1590	100	1689	5.0	0	True	ATTAAA	-19
PB.124.1	chr1	-	3981	29	full-splice_match	ATP13A2	ENST00000452699.5	3981	29	0	0	0	0	multi-exon	FALSE	canonical	1	100227	junction_28	125567.1501686631	NA	0	NA	TRUE	NA	NA	NA	C	coding	1175	3528	191	3718	5.0	-1	True	AATAAA	-20
PB.10113.12	chr6	-	2648	16	full-splice_match	MAP3K7	ENST00000369332.7	4830	16	-26	2208	-26	-98	multi-exon	FALSE	canonical	1	274957	junction_13	92041.16904284373	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	189	1928	10.0	-5	True	AGTAAA	-16
PB.4120.1	chr16	-	3022	17	novel_in_catalog	RHBDF1	novel	2992	18	NA	NA	28	-1	intron_retention	FALSE	canonical	1	2149	junction_16	70179.0404592236	NA	4	NA	TRUE	NA	NA	NA	C	coding	878	2637	106	2742	15.0	1	True	AATAAA	-34
PB.4237.5	chr16	+	2136	1	full-splice_match	AC087190.3	ENST00000574616.2	8334	1	4905	1293	4905	-1293	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7522	False	NA	NA
PB.4237.4	chr16	+	2922	1	full-splice_match	AC087190.3	ENST00000574616.2	8334	1	4333	1079	4333	-1079	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-8094	False	AATAAA	-21
PB.4237.3	chr16	+	4679	1	full-splice_match	AC087190.3	ENST00000574616.2	8334	1	2573	1082	2573	-1082	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9854	False	AATAAA	-18
PB.4237.2	chr16	+	2991	4	full-splice_match	C16orf72	ENST00000327827.11	5953	4	397	2565	-146	-2565	multi-exon	FALSE	canonical	1	465252	junction_3	58932.99068339302	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	1	828	15.0	-3595	False	ATTAAA	-15
PB.4237.1	chr16	+	2532	3	novel_not_in_catalog	C16orf72	novel	5953	4	NA	NA	-34	-2564	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	232626.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	76	231	138	368	15.0	-30	True	ATTAAA	-16
PB.10113.15	chr6	-	4179	1	genic	MAP3K7	novel	NA	NA	NA	NA	-34	-67218	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	88	267	197	463	100.0	-13	True	NA	NA
PB.11850.29	chr9	-	2372	14	incomplete-splice_match	FNBP1	ENST00000443566.6	5227	15	-25	8171	-25	-90	3prime_fragment	FALSE	canonical	1	461427	junction_13	220431.6159575768	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	245	1912	35.0	0	True	AATAAA	-21
PB.6602.1	chr2	+	2002	1	antisense	novelGene_ST3GAL5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	103	312	1202	1513	70.0	3194	False	NA	NA
PB.11850.22	chr9	-	5403	15	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-792	0	any annotated donor/acceptor	FALSE	canonical	1	1399	junction_14	313712.3061463126	NA	6	1	TRUE	NA	NA	NA	C	coding	635	1908	144	2051	10.0	-1	True	AATAAA	-13
PB.11850.23	chr9	-	5219	15	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	437	junction_5	325534.94277718314	NA	8	NA	TRUE	NA	NA	NA	C	coding	559	1680	188	1867	10.0	4	True	AATAAA	-13
PB.11850.24	chr9	-	5197	14	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-33	0	no_combination_of_known_junctions	FALSE	canonical	1	6127	junction_10	322001.2253525327	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	253	1845	10.0	-8	True	AATAAA	-13
PB.965.1	chr1	+	6140	28	novel_not_in_catalog	CEP350	novel	13491	38	NA	NA	0	-9070	any annotated donor/acceptor	TRUE	canonical	0	0	junction_6	41435.81528469386	NA	14	3	TRUE	NA	NA	NA	B	coding	1555	4665	1474	6138	60.0	-37	True	AATAAA	-40
PB.11850.26	chr9	-	5059	16	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	314609.56833202357	NA	5	1	TRUE	NA	NA	NA	C	coding	551	1656	238	1893	10.0	7	True	AATAAA	-13
PB.7731.2	chr22	-	4067	15	full-splice_match	LARGE1	ENST00000397394.6	4138	15	62	9	48	4	multi-exon	FALSE	canonical	1	61669	junction_14	35966.397918468174	NA	0	NA	TRUE	NA	NA	NA	A	coding	756	2271	455	2725	10.0	692	False	AATAAA	-18
PB.4579.18	chr16	-	2923	9	incomplete-splice_match	MBTPS1	ENST00000343411.7	4338	23	84	32215	-4	-927	3prime_fragment	FALSE	canonical	1	346556	junction_8	140673.3381355099	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	413	1579	20.0	12	True	ATTAAA	-11
PB.11862.1	chr9	+	2614	20	full-splice_match	POMT1	ENST00000402686.7	3038	20	-43	467	-1	-459	multi-exon	TRUE	canonical	1	71055	junction_1	73051.0416153382	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	204	2381	45.0	-43	False	AATAAA	-24
PB.4579.14	chr16	-	4238	23	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	311	junction_11	164092.61256899717	NA	1	NA	TRUE	NA	NA	NA	C	coding	1043	3132	426	3557	35.0	-1	True	AATAAA	-22
PB.4579.15	chr16	-	5283	19	incomplete-splice_match	MBTPS1	ENST00000343411.7	4338	23	76	7248	5	-1711	3prime_fragment	FALSE	canonical	1	346556	junction_18	114127.05364610688	NA	16	1	TRUE	NA	NA	NA	C	coding	906	2721	421	3141	65.0	4	True	NA	NA
PB.4579.16	chr16	-	4150	19	incomplete-splice_match	MBTPS1	ENST00000343411.7	4338	23	84	8373	-4	-2836	3prime_fragment	FALSE	canonical	1	346556	junction_18	114127.05364610688	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	413	3133	80.0	12	True	NA	NA
PB.4579.17	chr16	-	2184	11	incomplete-splice_match	MBTPS1	ENST00000343411.7	4338	23	-13	27754	-13	2	3prime_fragment	FALSE	canonical	1	346556	junction_10	130035.007403545	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	510	2156	10.0	-15	True	TATAAA	-16
PB.4579.10	chr16	-	4524	24	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	2025	junction_23	194032.73725808205	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	684	3842	40.0	1	True	AATAAA	-23
PB.4579.11	chr16	-	4399	24	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	108	junction_20	199582.11066772998	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	1336	3717	40.0	0	True	AATAAA	-23
PB.4579.12	chr16	-	4271	23	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	23	-1	any annotated donor/acceptor	FALSE	canonical	1	426	junction_22	156474.60012131694	NA	1	NA	TRUE	NA	NA	NA	C	coding	1052	3159	431	3589	40.0	-1	True	AATAAA	-23
PB.7340.11	chr20	+	5796	37	novel_in_catalog	ARFGEF2	novel	8852	39	NA	NA	-174	-3075	no_combination_of_known_junctions	FALSE	canonical	1	11346	junction_1	58363.91415180787	NA	35	3	TRUE	NA	NA	NA	C	coding	1597	4794	584	5377	35.0	-12	True	AATAAA	-18
PB.7340.10	chr20	+	2100	14	incomplete-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-176	60528	-176	-22281	3prime_fragment	FALSE	canonical	1	114682	junction_1	42896.39980686646	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1923	177	2099	65.0	-14	True	NA	NA
PB.7340.13	chr20	+	2688	9	novel_not_in_catalog	ARFGEF2	novel	8852	39	NA	NA	-167	-27835	any annotated donor/acceptor	FALSE	canonical	1	54443	junction_7	68461.53179238232	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	168	1358	80.0	-5	True	NA	NA
PB.7340.12	chr20	+	5958	39	full-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-171	3065	-171	-3065	multi-exon	FALSE	canonical	1	114682	junction_1	51313.882148116645	NA	0	NA	TRUE	NA	NA	NA	C	coding	1785	5358	172	5529	25.0	-9	True	AATAAA	-28
PB.7340.14	chr20	+	1638	9	incomplete-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-161	67129	-161	-28882	3prime_fragment	FALSE	canonical	1	114682	junction_1	53153.49676041432	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	162	1355	25.0	1	True	CATAAA	-16
PB.7340.17	chr20	+	4531	8	incomplete-splice_match	ARFGEF2	ENST00000371917.4	8852	39	95357	8	19147	-8	5prime_fragment	FALSE	canonical	1	227068	junction_6	33859.11773746008	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	107	1045	40.0	NA	False	AATAAA	-6
PB.196.1	chr1	+	3204	8	full-splice_match	DHDDS	ENST00000525682.6	1235	8	-41	-1928	16	7	multi-exon	FALSE	canonical	1	34284	junction_5	90444.12253892861	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	135	1034	30.0	-510	False	AATAGA	-22
PB.1190.22	chr1	+	2839	2	incomplete-splice_match	GALNT2	ENST00000485438.1	4030	6	19188	-2	12595	2	5prime_fragment	FALSE	canonical	1	1234444	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	110	False	AATAAA	-19
PB.939.5	chr1	+	1681	5	full-splice_match	PRDX6	ENST00000340385.5	1751	5	69	1	5	-1	multi-exon	FALSE	canonical	1	1964214	junction_1	849046.8326501489	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	64	738	25.0	0	True	AATAAA	-19
PB.11244.11	chr8	+	3186	27	novel_not_in_catalog	INTS8	novel	735	6	NA	NA	-3	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	147064.46061454696	NA	2	NA	TRUE	NA	NA	NA	C	coding	985	2958	146	3103	30.0	-9	True	AATAAA	-33
PB.7842.13	chr22	-	2219	16	full-splice_match	ARFGAP3	ENST00000263245.9	2857	16	132	506	-2	406	multi-exon	FALSE	canonical	1	295464	junction_15	98112.86909708747	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	89	1639	20.0	-37	True	TATAAA	-13
PB.6736.19	chr2	+	6663	41	full-splice_match	UGGT1	ENST00000376723.7	6682	41	-9	28	2	-28	multi-exon	FALSE	canonical	1	39395	junction_1	102816.01114694819	NA	0	NA	TRUE	NA	NA	NA	C	coding	1531	4596	410	5005	85.0	2	True	NA	NA
PB.6736.18	chr2	+	5011	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	62539	junction_20	104109.59194248136	NA	0	NA	TRUE	NA	NA	NA	C	coding	1547	4644	159	4802	30.0	0	True	ATTAAA	-27
PB.8779.51	chr4	+	4989	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	10	1716	intron_retention	FALSE	canonical	1	161024	junction_1	233560.91378880024	NA	3	NA	TRUE	NA	NA	NA	C	coding	558	1677	185	1861	45.0	12	True	AATAAA	-18
PB.9379.6	chr5	+	5501	16	novel_in_catalog	FER	novel	12119	20	NA	NA	-12	5700	combination_of_known_junctions	FALSE	canonical	1	34628	junction_1	22927.460211719917	NA	1	NA	TRUE	NA	NA	NA	B	coding	645	1938	250	2187	70.0	0	True	NA	NA
PB.6736.11	chr2	+	7555	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-19	1081	combination_of_known_junctions	FALSE	canonical	1	38885	junction_1	107850.59096350311	NA	1	NA	TRUE	NA	NA	NA	C	coding	1536	4611	178	4788	35.0	-19	True	TATAAA	-20
PB.8393.1	chr3	+	2272	1	novel_in_catalog	IFT122	novel	4414	31	NA	NA	32	-9653	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	39	True	NA	NA
PB.6736.13	chr2	+	5015	41	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	38885	junction_1	102850.32431010791	NA	3	NA	TRUE	NA	NA	NA	C	coding	1544	4635	177	4811	35.0	-18	True	ATTAAA	-22
PB.6736.12	chr2	+	4923	41	full-splice_match	UGGT1	ENST00000259253.10	10650	41	-4	5731	-4	-1	multi-exon	FALSE	canonical	1	101592	junction_1	99023.00664354472	NA	1	NA	TRUE	NA	NA	NA	C	coding	1555	4668	52	4719	35.0	-40	False	ATTAAA	-22
PB.6736.15	chr2	+	4989	40	novel_not_in_catalog	UGGT1	novel	586	5	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	14808	junction_1	109491.60549678821	NA	1	NA	TRUE	NA	NA	NA	C	coding	1541	4626	160	4785	35.0	-1	True	ATTAAA	-22
PB.6736.14	chr2	+	4502	37	incomplete-splice_match	UGGT1	ENST00000259253.10	10650	41	-113	13289	-2	-7559	3prime_fragment	FALSE	canonical	1	101592	junction_1	72932.70939761108	NA	0	NA	TRUE	NA	NA	NA	C	coding	1416	4251	161	4411	80.0	-2	True	NA	NA
PB.7804.25	chr22	+	2702	21	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5595	19637	any annotated donor/acceptor	FALSE	canonical	1	72675	junction_16	173512.6341210057	NA	2	NA	TRUE	NA	NA	NA	C	coding	565	1698	293	1990	30.0	20	True	AATAAA	-13
PB.6736.16	chr2	+	5653	41	full-splice_match	UGGT1	ENST00000259253.10	10650	41	-111	5108	0	585	multi-exon	FALSE	canonical	1	101592	junction_1	99023.00664354472	NA	0	NA	TRUE	NA	NA	NA	C	coding	1555	4668	159	4826	15.0	0	True	AAAACA	-16
PB.12070.2	chrX	-	4461	5	novel_in_catalog	PIM2	novel	2075	6	NA	NA	0	-2	intron_retention	TRUE	canonical	1	463316	junction_4	272725.0115578877	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	2915	3514	20.0	-1	True	AATAAA	-15
PB.12070.3	chrX	-	2073	6	full-splice_match	PIM2	ENST00000376509.4	2075	6	0	2	0	-2	multi-exon	FALSE	canonical	1	344506	junction_3	291724.7633365395	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	191	1126	20.0	-1	True	AATAAA	-15
PB.12070.1	chrX	-	4909	4	novel_not_in_catalog	PIM2	novel	2075	6	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	447768.4503788388	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	2915	3217	20.0	-1	True	AATAAA	-15
PB.7342.17	chr20	-	3591	15	novel_in_catalog	STAU1	novel	3684	14	NA	NA	29	-3	intron_retention	FALSE	canonical	1	36478	junction_14	363320.8128927743	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	506	2239	30.0	-5	True	AATAAA	-11
PB.5609.3	chr19	+	2413	10	novel_not_in_catalog	NFIC	novel	8399	11	NA	NA	10	2068	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	279185.38895141095	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	79	1365	85.0	-71	False	NA	NA
PB.12070.4	chrX	-	2173	5	novel_in_catalog	PIM2	novel	2075	6	NA	NA	0	-2	intron_retention	FALSE	canonical	1	344506	junction_2	221600.2473537654	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	191	1027	20.0	-1	True	AATAAA	-15
PB.2708.1	chr12	-	2836	18	full-splice_match	AGAP2	ENST00000257897.7	5388	18	-4	2556	-4	235	multi-exon	TRUE	canonical	1	63429	junction_17	92829.98336039946	NA	1	NA	TRUE	NA	NA	NA	A	coding	836	2511	91	2601	10.0	-1	True	NA	NA
PB.7342.19	chr20	-	3429	14	novel_not_in_catalog	STAU1	novel	3684	14	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	375603.82489909284	NA	42	2	TRUE	NA	NA	NA	C	coding	496	1491	587	2077	30.0	-1	True	AATAAA	-11
PB.7342.18	chr20	-	3469	14	full-splice_match	STAU1	ENST00000371856.6	3684	14	28	187	28	-3	multi-exon	FALSE	canonical	1	70219	junction_12	315854.32264583494	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	384	2117	30.0	-6	True	AATAAA	-11
PB.6677.5	chr2	-	2055	15	full-splice_match	UXS1	ENST00000283148.11	2099	15	37	7	-3	-2	multi-exon	FALSE	canonical	1	86479	junction_13	115756.42709068478	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	62	1339	25.0	-4	True	AATAAA	-18
PB.6677.7	chr2	-	1771	15	full-splice_match	UXS1	ENST00000283148.11	2099	15	37	291	-3	10	multi-exon	FALSE	canonical	1	86479	junction_13	115756.42709068478	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	62	1339	10.0	-4	True	AATAAA	-40
PB.6677.6	chr2	-	1942	14	novel_in_catalog	UXS1	novel	2099	15	NA	NA	1	-7	no_combination_of_known_junctions	FALSE	canonical	1	25502	junction_1	157092.30200522806	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	58	1146	25.0	0	True	AATAAA	-13
PB.6677.1	chr2	-	4454	15	full-splice_match	UXS1	ENST00000409501.7	1839	15	-28	-2587	12	2382	multi-exon	FALSE	canonical	1	248575	junction_14	81383.7102111952	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	87	1349	50.0	5	True	AGTAAA	-13
PB.6677.3	chr2	-	1942	14	novel_in_catalog	UXS1	novel	2099	15	NA	NA	-3	-1	no_combination_of_known_junctions	FALSE	canonical	1	25502	junction_1	135967.069492806	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	62	1135	25.0	-4	True	AATAAA	-24
PB.6677.2	chr2	-	2046	15	full-splice_match	UXS1	ENST00000409501.7	1839	15	-3	-204	-3	-1	multi-exon	FALSE	canonical	1	248575	junction_14	81383.7102111952	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	62	1324	25.0	-4	True	AATAAA	-24
PB.2493.5	chr12	-	3364	4	full-splice_match	LMO3	ENST00000541589.5	1499	4	-88	-1777	-11	-1	multi-exon	FALSE	canonical	1	4880	junction_3	78146.79560217993	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-19
PB.2493.4	chr12	-	3503	5	novel_not_in_catalog	LMO3	novel	3227	4	NA	NA	-221776	-1	intron_retention	FALSE	canonical	1	816	junction_4	77055.01920502973	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	269	706	20.0	-35	False	AATAAA	-19
PB.8650.1	chr4	+	2148	14	full-splice_match	IDUA	ENST00000247933.8	2163	14	17	-2	17	2	multi-exon	FALSE	canonical	1	47982	junction_10	59416.83716933358	NA	3	NA	TRUE	NA	NA	NA	A	coding	653	1962	72	2033	15.0	-3	True	AATATA	-16
PB.2493.1	chr12	-	3674	4	full-splice_match	LMO3	ENST00000537304.5	1685	4	35	-2024	35	-1	multi-exon	FALSE	canonical	1	89791	junction_3	36226.69296097684	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	440	877	20.0	-10	True	AATAAA	-19
PB.6677.8	chr2	-	1766	15	novel_not_in_catalog	UXS1	novel	2099	15	NA	NA	4	-9	any annotated donor/acceptor	FALSE	canonical	1	2631	junction_6	133610.6455760352	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	95	895	55.0	-3	True	AATAAA	-21
PB.2493.3	chr12	-	3606	4	incomplete-splice_match	LMO3	ENST00000453727.6	2403	5	-47	-950	44	-1	intron_retention	FALSE	canonical	1	20571	junction_2	64401.20671919812	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-19
PB.2493.2	chr12	-	3463	5	novel_in_catalog	LMO3	novel	3227	4	NA	NA	44	0	intron_retention	FALSE	canonical	1	2602	junction_4	63811.69052914599	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	225	662	20.0	-1	True	AATAAA	-23
PB.939.3	chr1	+	4740	4	full-splice_match	PRDX6	ENST00000470017.1	859	4	-3885	4	-16	-4	multi-exon	FALSE	canonical	1	3400796	junction_2	309891.65079248085	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	4263	4592	30.0	4	True	ATTAAA	-14
PB.5609.2	chr19	+	1656	11	novel_not_in_catalog	NFIC	novel	8399	11	NA	NA	-127	-28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	258779.7592278036	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	114	1433	70.0	-208	False	AAAAAG	-32
PB.2772.9	chr12	-	5712	24	full-splice_match	OSBPL8	ENST00000261183.7	7239	24	9	1518	5	-1518	multi-exon	FALSE	canonical	1	81870	junction_21	133303.310076394	NA	0	NA	TRUE	NA	NA	NA	C	coding	889	2670	472	3141	90.0	7	True	AGTAAA	-23
PB.2772.8	chr12	-	5551	23	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	36	-1518	combination_of_known_junctions	FALSE	canonical	1	161349	junction_21	114151.95203897239	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	437	2980	90.0	40	True	AGTAAA	-23
PB.5740.1	chr19	+	2995	4	full-splice_match	ZNF136	ENST00000343979.5	3643	4	16	632	16	456	multi-exon	FALSE	canonical	1	52825	junction_1	16327.533602952884	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	125	1747	15.0	-19	True	AATAAA	-17
PB.6196.2	chr19	+	4416	5	full-splice_match	ZNF845	ENST00000595091.6	4413	5	0	-3	0	3	multi-exon	FALSE	canonical	1	5817	junction_1	12608.763646270003	NA	4	NA	TRUE	NA	NA	NA	C	coding	970	2913	220	3132	5.0	0	True	NA	NA
PB.2772.4	chr12	-	7087	23	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	15	-9	no_combination_of_known_junctions	FALSE	canonical	1	1947	junction_1	145458.97867315158	NA	3	NA	TRUE	NA	NA	NA	C	coding	817	2454	450	2903	50.0	-8	True	AATAAA	-7
PB.4832.30	chr17	-	3118	13	full-splice_match	USP22	ENST00000261497.8	5220	13	-27	2129	-27	653	multi-exon	FALSE	canonical	1	850889	junction_12	298845.56648775784	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	232	1809	10.0	-3	True	AATACA	-12
PB.4832.31	chr17	-	2669	13	full-splice_match	USP22	ENST00000261497.8	5220	13	57	2494	57	288	multi-exon	FALSE	canonical	1	850889	junction_12	298845.56648775784	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	148	1725	5.0	25	True	AGTAAA	-20
PB.4832.32	chr17	-	2531	13	full-splice_match	USP22	ENST00000261497.8	5220	13	-9	2698	-9	84	multi-exon	FALSE	canonical	1	850889	junction_12	298845.56648775784	NA	3	NA	TRUE	NA	NA	NA	C	coding	525	1578	214	1791	20.0	-2	True	AGTAAA	-36
PB.2623.2	chr12	+	1992	15	full-splice_match	EIF4B	ENST00000262056.13	4148	15	299	1857	0	0	multi-exon	FALSE	canonical	1	557	junction_3	256631.0839923066	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	28	1863	75.0	1	True	AATAAA	-38
PB.2623.3	chr12	+	3853	15	novel_not_in_catalog	EIF4B	novel	4148	15	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	557	junction_3	253864.84219190816	NA	2	NA	TRUE	NA	NA	NA	C	coding	604	1815	54	1868	25.0	-25	True	AATAAA	-18
PB.2623.1	chr12	+	3851	15	full-splice_match	EIF4B	ENST00000262056.13	4148	15	296	1	-2	-1	multi-exon	FALSE	canonical	1	557	junction_3	256631.0839923066	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	31	1866	25.0	-2	True	AATAAA	-18
PB.2623.6	chr12	+	3866	15	full-splice_match	EIF4B	ENST00000420463.7	1936	15	-2	-1928	-2	-1	multi-exon	FALSE	canonical	1	557	junction_3	239633.08552417535	NA	3	NA	TRUE	NA	NA	NA	C	coding	616	1851	31	1881	25.0	-2	True	AATAAA	-18
PB.2623.7	chr12	+	3711	14	novel_in_catalog	EIF4B	novel	4148	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	557	junction_3	262142.5013932274	NA	2	NA	TRUE	NA	NA	NA	C	coding	565	1698	29	1726	25.0	0	True	AATAAA	-18
PB.2623.4	chr12	+	3957	15	novel_in_catalog	EIF4B	novel	4148	15	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	557	junction_3	257488.0884617356	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	596	1972	25.0	-18	True	AATAAA	-18
PB.2623.5	chr12	+	3217	15	full-splice_match	EIF4B	ENST00000262056.13	4148	15	282	649	-8	-649	multi-exon	FALSE	canonical	1	557	junction_3	256631.0839923066	NA	4	1	TRUE	NA	NA	NA	C	coding	611	1836	45	1880	15.0	-16	True	AATAAA	-23
PB.124.4	chr1	-	4015	29	full-splice_match	ATP13A2	ENST00000326735.12	3840	29	-176	1	-20	0	multi-exon	FALSE	canonical	1	100227	junction_28	126101.61113620509	NA	0	NA	TRUE	NA	NA	NA	C	coding	1180	3543	211	3753	0.0	-21	True	AATAAA	-19
PB.2623.8	chr12	+	2531	15	full-splice_match	EIF4B	ENST00000262056.13	4148	15	298	1319	0	428	multi-exon	FALSE	canonical	1	557	junction_3	256631.0839923066	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1836	29	1864	40.0	0	True	AATAAA	-19
PB.2623.9	chr12	+	3731	15	full-splice_match	EIF4B	ENST00000262056.13	4148	15	304	113	3	-113	multi-exon	FALSE	canonical	1	557	junction_3	256631.0839923066	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	23	1858	35.0	6	True	AATACA	-32
PB.3127.1	chr13	+	1905	4	full-splice_match	AL354696.2	ENST00000619407.4	1910	4	4	1	4	-1	multi-exon	FALSE	canonical	1	694	junction_3	6981.430910318855	NA	4	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-16	True	AATAAA	-12
PB.9738.2	chr6	-	4526	7	full-splice_match	NEDD9	ENST00000379446.9	4536	7	13	-3	-11	3	multi-exon	FALSE	canonical	1	215814	junction_6	73740.92941206772	NA	2	NA	TRUE	NA	NA	NA	C	coding	834	2505	155	2659	15.0	-2	True	ATTAAA	-26
PB.6312.6	chr2	-	1701	18	incomplete-splice_match	NOL10	ENST00000381685.9	2589	21	-5	17929	0	-17929	3prime_fragment	FALSE	canonical	1	174634	junction_14	53374.276727010445	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1590	112	1701	40.0	2	True	AAAAAG	-41
PB.6312.5	chr2	-	2120	21	full-splice_match	NOL10	ENST00000381685.9	2589	21	-21	490	-1	-490	multi-exon	FALSE	canonical	1	174634	junction_17	83721.75044925603	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1992	128	2119	50.0	-14	False	NA	NA
PB.6312.4	chr2	-	2310	21	full-splice_match	NOL10	ENST00000381685.9	2589	21	9	270	9	-270	multi-exon	FALSE	canonical	1	174634	junction_17	83721.75044925603	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	98	2164	5.0	16	False	NA	NA
PB.6312.3	chr2	-	2594	21	full-splice_match	NOL10	ENST00000381685.9	2589	21	-6	1	-1	-1	multi-exon	FALSE	canonical	1	174634	junction_17	83721.75044925603	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	113	2179	10.0	1	True	ATTAAA	-16
PB.6312.2	chr2	-	2781	22	novel_not_in_catalog	NOL10	novel	3333	20	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	118366.94204616653	NA	7	1	TRUE	NA	NA	NA	C	coding	684	2055	309	2363	5.0	-1	True	ATTAAA	-19
PB.6312.1	chr2	-	3497	21	full-splice_match	NOL10	ENST00000381685.9	2589	21	-8	-900	0	11	multi-exon	FALSE	canonical	1	174634	junction_17	83721.75044925603	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	115	2181	55.0	-1	True	AATAAA	-28
PB.10986.48	chr8	-	1719	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	117	2039	0	-193	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	138	1157	20.0	-26	False	AATAGA	-24
PB.6271.2	chr19	-	1971	3	full-splice_match	ZNF837	ENST00000597582.1	1969	3	7	-9	7	4	multi-exon	FALSE	canonical	1	16789	junction_1	2561.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	253	1848	20.0	-24	False	ATTAAA	-24
PB.6271.1	chr19	-	2068	3	full-splice_match	ZNF837	ENST00000427624.2	2038	3	-26	-4	12	4	multi-exon	FALSE	canonical	1	19581	junction_1	1165.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	350	1945	20.0	-19	False	ATTAAA	-24
PB.6533.1	chr2	-	2593	1	intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-4	True	NA	NA
PB.2339.2	chr11	-	3925	8	novel_not_in_catalog	ZNF202	novel	4130	8	NA	NA	1	-166	any annotated donor/acceptor	FALSE	canonical	1	8833	junction_6	39074.039093777355	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	997	2271	15.0	0	True	AATAAA	-21
PB.2339.3	chr11	-	3822	7	novel_not_in_catalog	ZNF202	novel	4130	8	NA	NA	-1	-166	any annotated donor/acceptor	FALSE	canonical	1	10947	junction_6	39467.04029700676	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	894	2168	15.0	-17	True	AATAAA	-21
PB.2339.1	chr11	-	4065	9	novel_in_catalog	ZNF202	novel	4130	8	NA	NA	-4	-166	combination_of_known_junctions	FALSE	canonical	1	19907	junction_7	34990.77243002789	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	465	2411	15.0	-20	True	AATAAA	-21
PB.2339.6	chr11	-	3372	7	novel_in_catalog	ZNF202	novel	4130	8	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	8833	junction_5	29276.617164271785	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	330	1163	5.0	-1	True	AGTAAA	-13
PB.2339.7	chr11	-	3629	9	novel_in_catalog	ZNF202	novel	4130	8	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	1	19907	junction_7	34990.77243002789	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	468	2414	5.0	-23	True	AGTAAA	-12
PB.2339.4	chr11	-	3501	8	novel_not_in_catalog	ZNF202	novel	4130	8	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	8833	junction_6	39074.039093777355	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	1011	2285	5.0	-14	True	AGTAAA	-13
PB.2339.5	chr11	-	3372	7	full-splice_match	ZNF202	ENST00000529691.1	3384	7	11	1	0	-1	multi-exon	FALSE	canonical	1	10947	junction_6	37228.68271761558	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	210	2156	5.0	-1	True	AGTAAA	-13
PB.5736.1	chr19	+	2868	4	full-splice_match	ZNF844	ENST00000439326.7	6620	4	0	3752	0	660	multi-exon	FALSE	canonical	1	49153	junction_1	6644.607487780348	NA	1	NA	TRUE	NA	NA	NA	A	coding	666	2001	176	2176	25.0	4	True	ATTAAA	-21
PB.1517.15	chr10	-	3094	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	canonical	1	1651	junction_9	164104.405437815	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	441	1526	15.0	18	True	AATAAA	-13
PB.463.1	chr1	+	2903	11	full-splice_match	IL23R	ENST00000347310.9	2912	11	-5	14	-5	-14	multi-exon	FALSE	canonical	1	4276	junction_6	4604.194241124064	NA	0	NA	TRUE	NA	NA	NA	A	coding	629	1890	177	2066	100.0	-63	False	NA	NA
PB.3377.2	chr14	-	2654	2	full-splice_match	SPTSSA	ENST00000298130.4	2777	2	118	5	118	-5	multi-exon	FALSE	canonical	1	962167	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	1	True	NA	NA
PB.9980.1	chr6	-	4442	5	full-splice_match	TREML2	ENST00000483722.1	3302	5	91	-1231	91	1231	multi-exon	FALSE	canonical	1	20048	junction_4	14793.0337828317	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	96	1061	25.0	-1	True	NA	NA
PB.10763.3	chr7	+	2712	12	full-splice_match	PSMC2	ENST00000292644.4	2637	12	-69	-6	-69	0	multi-exon	FALSE	canonical	1	616581	junction_5	330229.12249094644	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	70	1371	15.0	0	True	AATAAA	-20
PB.3448.4	chr14	+	6880	12	novel_not_in_catalog	SAMD4A	novel	3003	13	NA	NA	-988	-3	any annotated donor/acceptor	FALSE	canonical	1	33583	junction_1	44099.081823803084	NA	3	NA	TRUE	NA	NA	NA	B	coding	629	1890	627	2516	15.0	0	True	AATACA	-10
PB.3448.5	chr14	+	2960	13	novel_not_in_catalog	SAMD4A	novel	3003	13	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	1	8442	junction_1	47522.65162501165	NA	2	NA	TRUE	NA	NA	NA	B	coding	717	2154	624	2777	10.0	-53	True	NA	NA
PB.3448.2	chr14	+	2736	12	novel_not_in_catalog	SAMD4A	novel	3003	13	NA	NA	-1025	0	any annotated donor/acceptor	FALSE	canonical	1	33583	junction_1	44099.081823803084	NA	1	NA	TRUE	NA	NA	NA	B	coding	629	1890	664	2553	10.0	-9968	False	NA	NA
PB.3448.3	chr14	+	2977	13	novel_not_in_catalog	SAMD4A	novel	3003	13	NA	NA	-1002	0	any annotated donor/acceptor	FALSE	canonical	1	33583	junction_1	43182.97010999629	NA	1	NA	TRUE	NA	NA	NA	B	coding	717	2154	641	2794	10.0	-9945	False	NA	NA
PB.3448.1	chr14	+	7215	13	novel_not_in_catalog	SAMD4A	novel	3003	13	NA	NA	-1052	0	any annotated donor/acceptor	FALSE	canonical	1	33583	junction_1	43182.97010999629	NA	4	NA	TRUE	NA	NA	NA	B	coding	717	2154	691	2844	0.0	-9995	False	AATACA	-17
PB.6059.1	chr19	+	2747	5	novel_in_catalog	ZNF233	novel	2938	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	5412	junction_1	4073.4148757522844	NA	0	NA	TRUE	NA	NA	NA	A	coding	670	2013	99	2111	50.0	2	True	ATTAAA	-7
PB.9033.13	chr4	+	4297	7	incomplete-splice_match	TMEM131L	ENST00000409959.7	5017	35	7	74748	7	3192	3prime_fragment	FALSE	canonical	1	123366	junction_6	13069.55411974291	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	43	726	70.0	-4	True	TTTAAA	-13
PB.6687.11	chr2	-	4724	18	novel_in_catalog	BUB1	novel	3576	24	NA	NA	-1	723	intron_retention	FALSE	canonical	1	297598	junction_16	55614.84575618662	NA	9	NA	TRUE	NA	NA	NA	C	coding	744	2235	70	2304	15.0	-2	True	NA	NA
PB.10763.1	chr7	+	1441	12	full-splice_match	PSMC2	ENST00000292644.4	2637	12	-39	1235	-39	-54	multi-exon	FALSE	canonical	1	616581	junction_5	330229.12249094644	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	40	1341	15.0	-900	False	AATAAA	-16
PB.1112.1	chr1	+	1937	4	full-splice_match	ATF3	ENST00000341491.8	2033	4	90	6	90	-1	multi-exon	FALSE	canonical	1	286086	junction_1	150819.6112535325	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	176	721	20.0	-1	True	AATAAA	-20
PB.6324.2	chr2	-	7216	52	novel_not_in_catalog	NBAS	novel	7281	52	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	4381	junction_51	53839.532461245624	NA	1	1	TRUE	NA	NA	NA	C	coding	2210	6633	450	7082	20.0	-5	True	AATAAA	-18
PB.1112.3	chr1	+	1812	4	full-splice_match	ATF3	ENST00000341491.8	2033	4	91	130	91	-125	multi-exon	FALSE	canonical	1	286086	junction_1	150819.6112535325	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	175	720	35.0	0	True	ATTAAA	-18
PB.7804.20	chr22	+	2714	22	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5586	19639	any annotated donor/acceptor	FALSE	canonical	1	20136	junction_4	152254.68184793784	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	311	2371	30.0	11	True	AATAAA	-15
PB.8292.25	chr3	-	1756	6	full-splice_match	GCSAM	ENST00000470085.5	1072	6	13	-697	6	568	multi-exon	FALSE	canonical	1	29832	junction_4	85877.4653389351	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	491	829	30.0	0	True	AATAAA	-26
PB.858.18	chr1	-	2348	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	134	8897	any annotated donor/acceptor	FALSE	canonical	1	25273	junction_1	98256.82824901053	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	217	957	45.0	-118	False	NA	NA
PB.504.6	chr1	-	3416	13	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	28971.406996453705	NA	3	NA	TRUE	NA	NA	NA	C	coding	563	1692	238	1929	25.0	-1	True	AATAAA	-18
PB.2031.8	chr11	-	3031	31	novel_in_catalog	MAP4K2	novel	7178	32	NA	NA	18	-12	intron_retention	FALSE	canonical	1	116557	junction_30	75587.78468773907	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	61	2643	5.0	-19	True	ATTAAA	-3
PB.10763.6	chr7	+	2061	12	full-splice_match	PSMC2	ENST00000292644.4	2637	12	-66	642	-66	539	multi-exon	FALSE	canonical	1	616581	junction_5	330229.12249094644	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	67	1368	85.0	3	True	AATAAA	-40
PB.8392.10	chr3	-	2824	7	novel_in_catalog	MBD4	novel	2478	8	NA	NA	1	-66	intron_retention	FALSE	canonical	1	319863	junction_4	105402.35023787024	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	196	1896	50.0	0	True	AATAAA	-29
PB.6265.1	chr19	+	2449	8	full-splice_match	ZNF274	ENST00000617501.4	2538	8	111	-22	-6	1	multi-exon	FALSE	canonical	1	46045	junction_1	48984.252763265766	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	68	2029	15.0	0	True	AATAAA	-23
PB.6265.2	chr19	+	2712	7	incomplete-splice_match	ZNF274	ENST00000610905.4	2559	8	172	-1	132	1	5prime_fragment	FALSE	canonical	1	104383	junction_1	34326.071973630904	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	341	2302	20.0	205	False	AATAAA	-13
PB.6265.3	chr19	+	2671	9	novel_not_in_catalog	ZNF274	novel	2539	5	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	8494	junction_6	71571.28072494843	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	77	949	20.0	-9	True	AATAAA	-14
PB.3432.9	chr14	+	2261	14	full-splice_match	FRMD6	ENST00000395718.6	4828	14	53	2514	-36	-556	multi-exon	FALSE	canonical	1	159380	junction_4	77071.40559401187	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	233	2077	60.0	-36	True	NA	NA
PB.3432.8	chr14	+	4435	14	novel_not_in_catalog	FRMD6	novel	563	4	NA	NA	-37	0	any annotated donor/acceptor	FALSE	canonical	1	11336	junction_1	115452.6192250187	NA	7	NA	TRUE	NA	NA	NA	C	coding	614	1845	190	2034	75.0	-37	True	NA	NA
PB.6265.6	chr19	+	2167	5	full-splice_match	ZNF274	ENST00000424679.6	2539	5	370	2	-1	-2	multi-exon	FALSE	canonical	1	2382	junction_1	77692.74933029465	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	104	1750	20.0	-22	True	AATAAA	-20
PB.6265.7	chr19	+	2008	8	full-splice_match	ZNF274	ENST00000617501.4	2538	8	107	423	-10	-305	multi-exon	FALSE	canonical	1	46045	junction_1	48984.252763265766	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	72	2006	50.0	-4	True	NA	NA
PB.3432.5	chr14	+	4883	15	novel_not_in_catalog	FRMD6	novel	563	4	NA	NA	30	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	160627.54758378345	NA	35	3	TRUE	NA	NA	NA	C	coding	545	1638	551	2188	25.0	-8554	False	AATAAA	-18
PB.3432.4	chr14	+	4212	14	full-splice_match	FRMD6	ENST00000395718.6	4828	14	27	589	27	-292	multi-exon	FALSE	canonical	1	159380	junction_4	77071.40559401187	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	259	2103	75.0	-8557	False	AAAAAG	-9
PB.3432.7	chr14	+	3138	1	novel_in_catalog	FRMD6	novel	563	4	NA	NA	-38	11308	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-38	True	TTTAAA	-3
PB.3432.6	chr14	+	4849	15	novel_not_in_catalog	FRMD6	novel	563	4	NA	NA	-40	-3	any annotated donor/acceptor	FALSE	canonical	1	1233	junction_2	141775.076852728	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	517	2154	25.0	-40	True	AATAAA	-18
PB.3432.1	chr14	+	4936	15	novel_not_in_catalog	FRMD6	novel	563	4	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	4384	junction_3	137635.90721509946	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	581	2242	25.0	-8579	False	AATAAA	-17
PB.3432.3	chr14	+	4236	14	full-splice_match	FRMD6	ENST00000344768.9	2972	14	-62	-1202	27	-292	multi-exon	FALSE	canonical	1	210731	junction_4	68209.22441521708	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	259	2127	75.0	-8557	False	AAAAAG	-9
PB.3432.2	chr14	+	4828	14	full-splice_match	FRMD6	ENST00000344768.9	2972	14	-67	-1789	22	-2	multi-exon	FALSE	canonical	1	210731	junction_4	68209.22441521708	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	264	2132	25.0	-8562	False	AATAAA	-19
PB.3563.2	chr14	+	6245	17	incomplete-splice_match	YLPM1	ENST00000325680.11	7108	21	-52	15186	-52	-1020	3prime_fragment	FALSE	canonical	1	126008	junction_4	109183.4114822501	NA	1	NA	TRUE	NA	NA	NA	C	coding	2023	6069	177	6245	65.0	-50	True	NA	NA
PB.3563.3	chr14	+	6936	19	novel_in_catalog	YLPM1	novel	4899	20	NA	NA	-47	-59	combination_of_known_junctions	FALSE	canonical	1	18386	junction_18	131672.28213215145	NA	1	NA	TRUE	NA	NA	NA	C	coding	2061	6186	172	6357	25.0	-45	True	ATTAAA	-16
PB.7804.23	chr22	+	2768	22	full-splice_match	SGSM3	ENST00000248929.13	2969	22	13	188	13	-2	multi-exon	FALSE	canonical	1	331892	junction_19	104584.80980455468	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	177	2426	30.0	18	True	AATAAA	-14
PB.3563.1	chr14	+	4968	20	full-splice_match	YLPM1	ENST00000552421.5	4899	20	-73	4	-73	-4	multi-exon	FALSE	canonical	1	17793	junction_4	122420.77560146507	NA	0	NA	TRUE	NA	NA	NA	C	coding	1440	4323	198	4520	10.0	-4	True	AATAAA	-38
PB.3563.4	chr14	+	7011	21	full-splice_match	YLPM1	ENST00000325680.11	7108	21	4	93	4	-2	multi-exon	FALSE	canonical	1	126008	junction_4	105187.94614568485	NA	0	NA	TRUE	NA	NA	NA	C	coding	2146	6441	121	6561	5.0	6	True	AATAAA	-40
PB.3563.5	chr14	+	7380	19	novel_in_catalog	YLPM1	novel	4899	20	NA	NA	-34	398	combination_of_known_junctions	FALSE	canonical	1	18386	junction_18	131672.28213215145	NA	2	NA	TRUE	NA	NA	NA	C	coding	2061	6186	159	6344	15.0	-32	True	AATAAA	-17
PB.9279.2	chr5	+	1480	9	full-splice_match	SMN1	ENST00000380707.8	1536	9	57	-1	-8	1	multi-exon	FALSE	canonical	1	5229	junction_6	187865.28450860738	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	24	902	20.0	NA	False	TTTAAA	-2
PB.9279.1	chr5	+	1946	8	full-splice_match	SMN1	ENST00000351205.8	900	8	-39	-1007	9	1	multi-exon	FALSE	canonical	1	5229	junction_6	188354.58347185803	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	46	924	20.0	NA	False	TTTAAA	-2
PB.1765.16	chr11	-	2537	15	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	1008	2	no_combination_of_known_junctions	FALSE	canonical	1	2396	junction_14	445120.8391579282	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	204	1364	15.0	1289	False	ATTAAA	-18
PB.1765.17	chr11	-	2379	15	full-splice_match	NAP1L4	ENST00000620138.4	2479	15	51	49	-26	-42	multi-exon	FALSE	canonical	1	177742	junction_11	400130.9588256572	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	91	1251	45.0	-36	True	AATACA	-15
PB.1765.14	chr11	-	2463	15	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-28	-3	combination_of_known_junctions	FALSE	canonical	1	40637	junction_11	417480.1092611161	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	93	1289	15.0	55	False	ATTAAA	-19
PB.1765.12	chr11	-	2659	15	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	65629	junction_14	437189.2361784376	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	329	1489	20.0	-1	True	ATTAAA	-15
PB.1765.13	chr11	-	2502	16	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-34	-3	no_combination_of_known_junctions	FALSE	canonical	1	18588	junction_15	465321.5566209099	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	168	1328	15.0	49	False	ATTAAA	-19
PB.4342.8	chr16	+	2122	13	novel_in_catalog	SPNS1	novel	829	5	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	15506	junction_1	176410.7140638596	NA	1	1	TRUE	NA	NA	NA	C	coding	455	1368	507	1874	5.0	-4	True	AATAAA	-18
PB.1765.11	chr11	-	2527	16	novel_not_in_catalog	NAP1L4	novel	2479	15	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	467311.7449293423	NA	2	1	TRUE	NA	NA	NA	C	coding	386	1161	193	1353	15.0	-1	True	ATTAAA	-19
PB.4342.6	chr16	+	2097	12	novel_not_in_catalog	SPNS1	novel	829	5	NA	NA	2	-1	intron_retention	FALSE	canonical	1	3834	junction_3	186579.85700011085	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	373	1854	10.0	-6	True	AATAAA	-13
PB.4342.7	chr16	+	1596	3	incomplete-splice_match	SPNS1	ENST00000567771.5	829	5	559	420	2	-420	internal_fragment	FALSE	canonical	1	474477	junction_2	30230.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	373	966	90.0	-6	True	CATAAA	-27
PB.4342.4	chr16	+	2536	1	novel_in_catalog	SPNS1	novel	829	5	NA	NA	1	-1933	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-10	True	NA	NA
PB.4342.5	chr16	+	2048	11	full-splice_match	SPNS1	ENST00000334536.12	2027	11	-23	2	0	-1	multi-exon	FALSE	canonical	1	76657	junction_6	174621.81845889133	NA	1	1	TRUE	NA	NA	NA	C	coding	476	1431	375	1805	10.0	-8	True	AATAAA	-13
PB.4342.2	chr16	+	1971	13	full-splice_match	SPNS1	ENST00000565975.5	1979	13	2	6	-1	-1	multi-exon	FALSE	canonical	1	31215	junction_1	172911.4350851968	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	7	1728	10.0	-12	True	AATAAA	-13
PB.4342.3	chr16	+	2212	12	full-splice_match	SPNS1	ENST00000311008.15	2208	12	0	-4	0	-1	multi-exon	FALSE	canonical	1	358516	junction_5	107982.62515732691	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	378	1964	5.0	-11	True	AATAAA	-18
PB.1765.19	chr11	-	2877	18	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	11	0	no_combination_of_known_junctions	FALSE	canonical	1	2440	junction_17	485942.49330893875	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	509	1636	20.0	12	True	ATTAAA	-15
PB.7804.22	chr22	+	2866	21	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5592	19818	no_combination_of_known_junctions	FALSE	canonical	1	118069	junction_2	142074.25359740588	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	296	2344	15.0	17	True	NA	NA
PB.7896.2	chr22	-	2858	19	novel_in_catalog	CPT1B	novel	2647	19	NA	NA	1	0	intron_retention	FALSE	canonical	1	15236	junction_18	108192.30520287064	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	777	2636	10.0	4534	False	AATAAA	-20
PB.8392.12	chr3	-	3068	1	novel_in_catalog	MBD4	novel	2478	8	NA	NA	25	132	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	46	False	NA	NA
PB.8299.1	chr3	-	2293	8	full-splice_match	CD200R1	ENST00000308611.7	2299	8	13	-7	-6	7	multi-exon	FALSE	canonical	1	12876	junction_3	2503.8705873841295	NA	1	NA	TRUE	NA	NA	NA	A	coding	348	1047	253	1299	30.0	-20	True	AATAAA	-20
PB.3220.15	chr13	+	3452	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	7	5363	7	-5363	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	19	1341	25.0	53	True	ATTAAA	-17
PB.10384.7	chr7	+	2629	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	427978.75701095257	NA	2	NA	TRUE	NA	NA	NA	C	coding	493	1482	125	1606	5.0	-3	True	AATAAA	-21
PB.39.5	chr1	+	2599	6	incomplete-splice_match	PRXL2B	ENST00000419916.7	2749	7	293	-1	-10	0	5prime_fragment	FALSE	canonical	1	136725	junction_4	48119.52638004659	NA	5	1	TRUE	NA	NA	NA	C	coding	184	555	3	557	0.0	-21	True	NA	NA
PB.39.4	chr1	+	2720	7	full-splice_match	PRXL2B	ENST00000419916.7	2749	7	24	5	1	0	multi-exon	FALSE	canonical	1	130720	junction_1	57825.98450715925	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	88	684	10.0	1	True	NA	NA
PB.39.1	chr1	+	2685	7	full-splice_match	PRXL2B	ENST00000493183.5	840	7	-11	-1834	-11	-1	multi-exon	FALSE	canonical	1	10566	junction_1	93364.61392423911	NA	13	NA	TRUE	NA	NA	NA	C	coding	214	645	2	646	5.0	-609	False	NA	NA
PB.39.3	chr1	+	2559	7	full-splice_match	PRXL2B	ENST00000378427.6	2689	7	-4	134	-2	-134	multi-exon	FALSE	canonical	1	105445	junction_5	65528.0006969031	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	3	644	25.0	-4	True	NA	NA
PB.9685.3	chr5	-	2493	6	novel_in_catalog	RACK1	novel	1150	8	NA	NA	3	-1	intron_retention	FALSE	canonical	1	19154137	junction_2	4240122.234894574	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	100	852	10.0	6	True	AATAAA	-20
PB.9018.13	chr4	+	2568	10	novel_not_in_catalog	TMEM184C	novel	4178	10	NA	NA	32	701	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	103062.2332864954	NA	4	2	TRUE	NA	NA	NA	C	coding	320	963	540	1502	20.0	21	True	AATAAA	-26
PB.9018.12	chr4	+	5127	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	15	-964	12	964	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	4	NA	TRUE	NA	NA	NA	C	coding	438	1317	560	1876	50.0	1	True	AATAAA	-10
PB.9018.11	chr4	+	4065	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	27	86	24	-86	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	548	1864	50.0	13	True	NA	NA
PB.9018.10	chr4	+	3195	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	12	971	9	-971	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	563	1879	45.0	-2	True	ATTAAA	-44
PB.11803.5	chr9	+	3005	19	novel_not_in_catalog	STXBP1	novel	2068	20	NA	NA	6	17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	171526.70107409256	NA	3	1	TRUE	NA	NA	NA	C	coding	577	1734	151	1884	5.0	-23	False	AATAAA	-18
PB.11803.4	chr9	+	4494	18	novel_in_catalog	STXBP1	novel	2068	20	NA	NA	-2	-8	intron_retention	FALSE	canonical	1	407873	junction_1	85277.364652017	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	159	1535	10.0	-2	True	AATAAA	-28
PB.11803.7	chr9	+	2188	10	incomplete-splice_match	STXBP1	ENST00000373299.4	3765	19	-18	23382	0	5612	3prime_fragment	FALSE	canonical	1	407873	junction_1	76945.10369777748	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	140	1045	15.0	-12	True	TATAAA	-42
PB.11803.6	chr9	+	3873	20	novel_in_catalog	STXBP1	novel	2068	20	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	4105	junction_1	207844.16610119026	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	279	2021	10.0	-14	True	AATAAA	-30
PB.1307.1	chr10	-	2605	1	full-splice_match	AC069544.1	ENST00000609399.1	999	1	77	-1683	77	1683	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	26	True	NA	NA
PB.69.3	chr1	-	2794	12	novel_not_in_catalog	SLC2A5	novel	4165	12	NA	NA	26	1483	any annotated donor/acceptor	FALSE	canonical	1	4135	junction_4	69679.99281236027	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	155	1357	25.0	3	True	AATAAA	-20
PB.10040.1	chr6	+	1759	11	full-splice_match	TINAG	ENST00000259782.8	1754	11	-15	10	-15	-10	multi-exon	FALSE	canonical	1	3943	junction_4	3264.038126309189	NA	0	NA	TRUE	NA	NA	NA	A	coding	476	1431	112	1542	20.0	-1	True	AATAAA	-24
PB.2801.1	chr12	+	1555	2	full-splice_match	LINC02397	ENST00000504409.3	10626	2	250	8821	250	-8821	multi-exon	FALSE	canonical	1	38388	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.2801.2	chr12	+	2119	2	full-splice_match	LINC02397	ENST00000504409.3	10626	2	366	8141	366	-8141	multi-exon	FALSE	canonical	1	38388	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	CATAAA	-22
PB.7343.5	chr20	+	2690	22	novel_in_catalog	DDX27	novel	2693	21	NA	NA	32	-7	combination_of_known_junctions	FALSE	canonical	1	47461	junction_10	235345.13014307086	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	71	2461	60.0	1	True	ATTAAA	-17
PB.9685.2	chr5	-	2799	5	novel_in_catalog	RACK1	novel	1150	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	318285	junction_4	12217990.58857557	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	2447	2752	10.0	-11	True	AATAAA	-20
PB.6796.3	chr2	-	3430	5	incomplete-splice_match	WDSUB1	ENST00000409124.1	1600	10	-36	33355	-2	-33355	3prime_fragment	FALSE	canonical	1	54404	junction_4	20136.850441106722	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	148	921	100.0	-5	True	NA	NA
PB.10240.4	chr6	-	2851	5	novel_not_in_catalog	NHSL1	novel	7500	7	NA	NA	-3	3699	intron_retention	TRUE	non_canonical	0	0	junction_1	44932.468618889616	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	633	1322	20.0	0	True	CATAAA	-15
PB.7343.3	chr20	+	1956	16	incomplete-splice_match	DDX27	ENST00000371764.8	2643	21	29	4753	29	-4746	3prime_fragment	FALSE	canonical	1	359238	junction_8	152406.23825625452	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1881	74	1954	55.0	-2	True	NA	NA
PB.10885.16	chr7	-	2113	8	full-splice_match	MKRN1	ENST00000255977.6	3151	8	188	850	-13	253	multi-exon	FALSE	canonical	1	313508	junction_6	87226.03828875309	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	38	1486	55.0	123	False	NA	NA
PB.10885.17	chr7	-	1856	8	full-splice_match	MKRN1	ENST00000255977.6	3151	8	54	1241	-16	-13	multi-exon	FALSE	canonical	1	313508	junction_6	87226.03828875309	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	172	1620	35.0	-11	True	AATAAA	-27
PB.10235.51	chr6	+	4654	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-2181	-6	intron_retention	FALSE	canonical	1	502	junction_1	256591.9118471737	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	608	2668	35.0	-9268	False	AATAAA	-43
PB.10885.15	chr7	-	2854	8	full-splice_match	MKRN1	ENST00000255977.6	3151	8	192	105	-9	-98	multi-exon	FALSE	canonical	1	313508	junction_6	87226.03828875309	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	34	1482	65.0	127	False	NA	NA
PB.10885.12	chr7	-	2463	6	full-splice_match	MKRN1	ENST00000495305.5	1390	6	-3	-1070	-3	-26	multi-exon	FALSE	canonical	1	11418	junction_4	193393.19004308293	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	369	1019	80.0	-8	True	NA	NA
PB.6796.1	chr2	-	1825	11	full-splice_match	WDSUB1	ENST00000359774.8	1912	11	78	9	-18	-1	multi-exon	FALSE	canonical	1	54404	junction_10	41386.90906748172	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	164	1594	30.0	15	False	AATAAA	-10
PB.10885.10	chr7	-	2680	7	novel_in_catalog	MKRN1	novel	3151	8	NA	NA	-6	-26	no_combination_of_known_junctions	FALSE	canonical	1	8887	junction_5	188877.54973240377	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	316	1236	80.0	2	True	NA	NA
PB.9585.1	chr5	+	2733	8	full-splice_match	CNOT8	ENST00000517876.5	2708	8	-26	1	7	-1	multi-exon	FALSE	canonical	1	37152	junction_1	243721.4404050289	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	503	1381	20.0	-13	True	AATAAA	-22
PB.7870.1	chr22	-	4443	13	full-splice_match	CERK	ENST00000216264.12	4450	13	12	-5	12	5	multi-exon	FALSE	canonical	1	214976	junction_12	68650.33323339047	NA	10	NA	TRUE	NA	NA	NA	C	coding	537	1614	102	1715	5.0	2	True	AATAAA	-19
PB.69.5	chr1	-	1912	12	full-splice_match	SLC2A5	ENST00000377424.8	4165	12	34	2219	34	1105	multi-exon	FALSE	canonical	1	112905	junction_7	47437.57310367956	NA	3	NA	TRUE	NA	NA	NA	C	coding	501	1506	147	1652	5.0	11	True	ATTAAA	-27
PB.7870.5	chr22	-	1826	13	full-splice_match	CERK	ENST00000216264.12	4450	13	27	2597	27	-25	multi-exon	FALSE	canonical	1	214976	junction_12	68650.33323339047	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	87	1700	35.0	17	True	TTTAAA	-37
PB.1317.7	chr10	+	2729	7	novel_in_catalog	VIM	novel	2135	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	18254330	junction_1	5215513.987410363	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	147	1379	10.0	-1	True	AATAAA	-16
PB.1317.6	chr10	+	1283	9	full-splice_match	VIM	ENST00000224237.9	1868	9	583	2	-143	-1	multi-exon	FALSE	canonical	1	18254330	junction_1	4769194.649838388	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	22	963	10.0	-7680	False	AATAAA	-14
PB.1317.5	chr10	+	2319	8	full-splice_match	VIM	ENST00000487938.5	2272	8	-47	0	-47	0	multi-exon	FALSE	canonical	1	18254330	junction_1	4828970.2782351235	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	193	1488	10.0	-8310	False	AATAAA	-16
PB.1317.4	chr10	+	1586	9	full-splice_match	VIM	ENST00000224237.9	1868	9	-2	284	-2	-283	multi-exon	FALSE	canonical	1	18254330	junction_1	4769194.649838388	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	148	1548	65.0	-2	True	AATAAA	-38
PB.1317.3	chr10	+	2316	10	novel_in_catalog	VIM	novel	2135	10	NA	NA	68	1	combination_of_known_junctions	FALSE	canonical	1	5386	junction_1	9189471.13219544	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	593	1993	10.0	-20	True	AATAAA	-17
PB.1317.2	chr10	+	2155	10	full-splice_match	VIM	ENST00000544301.6	2135	10	-18	-2	-18	1	multi-exon	FALSE	canonical	1	997	junction_1	9190674.089113269	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	432	1832	10.0	0	True	AATAAA	-17
PB.1317.1	chr10	+	1992	9	full-splice_match	VIM	ENST00000224237.9	1868	9	-124	0	-124	0	multi-exon	FALSE	canonical	1	18254330	junction_1	4769194.649838388	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	270	1670	10.0	-8387	False	AATAAA	-16
PB.9828.1	chr6	-	4490	7	novel_in_catalog	TRIM27	novel	1813	5	NA	NA	21	0	intron_retention	TRUE	canonical	1	514463	junction_6	107405.22287269523	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	336	1283	5.0	17	True	AATAAA	-18
PB.11780.29	chr9	+	1745	11	novel_in_catalog	NEK6	novel	2578	10	NA	NA	11	-981	no_combination_of_known_junctions	FALSE	canonical	1	21340	junction_1	267070.63743624085	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	192	1235	25.0	1	True	GATAAA	-24
PB.6851.30	chr2	-	2611	14	full-splice_match	ATF2	ENST00000264110.6	4176	14	18	1547	15	483	multi-exon	FALSE	canonical	1	239115	junction_9	79357.56893942965	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	282	1799	5.0	11	True	NA	NA
PB.9055.12	chr4	+	2122	6	novel_in_catalog	MSMO1	novel	2269	6	NA	NA	81	-19	combination_of_known_junctions	FALSE	canonical	1	41098	junction_1	403666.0403731778	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	177	1058	20.0	-89	False	ATTAAA	-20
PB.2510.3	chr12	+	2333	20	full-splice_match	LRMP	ENST00000547044.5	2208	20	-39	-86	1	0	multi-exon	FALSE	canonical	1	22487	junction_1	159514.16064952663	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	560	2059	45.0	-5	True	AATAAA	-18
PB.2510.2	chr12	+	2364	21	full-splice_match	LRMP	ENST00000354454.7	2504	21	238	-98	10	-1	multi-exon	FALSE	canonical	1	147136	junction_1	141935.67571495194	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	592	2091	45.0	-1	True	AATAAA	-17
PB.2510.1	chr12	+	2253	22	novel_in_catalog	LRMP	novel	4540	39	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	106865	junction_2	157838.62828896035	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	480	1979	45.0	0	True	AATAAA	-18
PB.2510.6	chr12	+	2260	20	novel_in_catalog	LRMP	novel	4540	39	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	36765	junction_3	167769.5576881271	NA	33	5	TRUE	NA	NA	NA	C	coding	499	1500	488	1987	45.0	0	True	AATAAA	-17
PB.2510.5	chr12	+	4263	19	novel_in_catalog	LRMP	novel	4540	39	NA	NA	-31	0	intron_retention	FALSE	canonical	1	147136	junction_1	148678.40281413138	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	786	1772	45.0	-31	True	AATAAA	-18
PB.2510.4	chr12	+	2592	22	novel_in_catalog	LRMP	novel	4540	39	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	1	33734	junction_8	177503.7173680042	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	1540	2319	45.0	-49	True	AATAAA	-17
PB.11236.8	chr8	-	3978	5	novel_not_in_catalog	RBM12B	novel	7269	3	NA	NA	2	630	intron_retention	FALSE	canonical	1	2518	junction_3	44315.383088155744	NA	3	NA	TRUE	NA	NA	NA	C	coding	1001	3006	343	3348	35.0	-7	True	AATAAA	-20
PB.6306.8	chr2	-	1550	6	full-splice_match	YWHAQ	ENST00000238081.7	2208	6	17	641	17	468	multi-exon	FALSE	canonical	1	1410037	junction_5	702487.9131786966	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	140	877	10.0	-29	True	AATAAA	-20
PB.2460.13	chr12	+	2416	5	full-splice_match	CLEC2D	ENST00000290855.10	5279	5	0	2863	0	875	multi-exon	FALSE	canonical	1	169138	junction_4	77565.52369247242	NA	5	NA	TRUE	NA	NA	NA	C	coding	218	657	1299	1955	75.0	-4	True	NA	NA
PB.2460.12	chr12	+	3112	5	full-splice_match	CLEC2D	ENST00000479877.5	1855	5	-15	-1242	0	554	multi-exon	FALSE	canonical	1	108964	junction_4	98755.09604667245	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	2316	2972	40.0	-4	True	GATAAA	-22
PB.2460.11	chr12	+	3258	5	full-splice_match	CLEC2D	ENST00000290855.10	5279	5	0	2021	0	1717	multi-exon	FALSE	canonical	1	169138	junction_4	77565.52369247242	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	1299	1955	10.0	-4	True	NA	NA
PB.2460.10	chr12	+	3634	5	full-splice_match	CLEC2D	ENST00000479877.5	1855	5	-15	-1764	0	1076	multi-exon	FALSE	canonical	1	108964	junction_4	98755.09604667245	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	2316	2972	25.0	-4	True	NA	NA
PB.2460.17	chr12	+	2095	5	full-splice_match	CLEC2D	ENST00000290855.10	5279	5	0	3184	0	554	multi-exon	FALSE	canonical	1	169138	junction_4	77565.52369247242	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	1299	1955	40.0	-4	True	GATAAA	-22
PB.2460.16	chr12	+	2252	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	554	combination_of_known_junctions	FALSE	canonical	1	39893	junction_3	114324.03563660618	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1456	2112	40.0	-4	True	GATAAA	-22
PB.2460.15	chr12	+	2306	7	novel_not_in_catalog	CLEC2D	novel	571	4	NA	NA	0	569	any annotated donor/acceptor	FALSE	canonical	1	38230	junction_5	114487.54653964189	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	1495	2151	25.0	0	True	GATAAA	-37
PB.2460.14	chr12	+	2396	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	731	combination_of_known_junctions	FALSE	canonical	1	10502	junction_4	131993.15425218083	NA	5	NA	TRUE	NA	NA	NA	C	coding	218	657	1423	2079	80.0	-4	True	AATAAA	-21
PB.2460.19	chr12	+	2220	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	555	combination_of_known_junctions	FALSE	canonical	1	10502	junction_4	131993.15425218083	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	1423	2079	35.0	-4	True	GATAAA	-23
PB.2460.18	chr12	+	2239	7	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	554	combination_of_known_junctions	FALSE	canonical	1	7471	junction_1	142841.57596170038	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1443	2099	40.0	-4	True	GATAAA	-22
PB.9055.13	chr4	+	2309	6	novel_in_catalog	MSMO1	novel	2269	6	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	1	2738	junction_1	416545.0643608204	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	216	1097	30.0	48	False	ATTAAA	-16
PB.7347.2	chr20	+	4298	16	full-splice_match	SLC9A8	ENST00000361573.2	6094	16	-52	1848	-52	-1847	multi-exon	FALSE	canonical	1	61525	junction_6	23765.896471484793	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	95	1840	10.0	-71	True	TATAAA	-19
PB.7347.3	chr20	+	6133	16	full-splice_match	SLC9A8	ENST00000361573.2	6094	16	-40	1	-40	0	multi-exon	FALSE	canonical	1	61525	junction_6	23765.896471484793	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	83	1828	15.0	-59	True	AATAAA	-20
PB.7347.1	chr20	+	4321	15	novel_not_in_catalog	SLC9A8	novel	6309	16	NA	NA	-82	-1847	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	41613.9018584253	NA	8	2	TRUE	NA	NA	NA	C	coding	395	1188	676	1863	10.0	-564	False	TATAAA	-19
PB.7347.4	chr20	+	4325	16	full-splice_match	SLC9A8	ENST00000417961.5	6309	16	137	1847	-31	-1847	multi-exon	FALSE	canonical	1	4448	junction_6	32454.68604986891	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	74	1867	10.0	-50	True	TATAAA	-19
PB.10343.9	chr6	+	2078	19	novel_not_in_catalog	ERMARD	novel	551	6	NA	NA	5	1	any annotated donor/acceptor	TRUE	canonical	1	5336	junction_16	69938.98754957694	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	16	2070	30.0	18	True	AGTAAA	-21
PB.10343.8	chr6	+	3760	18	novel_in_catalog	ERMARD	novel	551	6	NA	NA	5	-4	intron_retention	FALSE	canonical	1	9349	junction_1	58604.76013969464	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1656	2103	3758	40.0	18	True	AGTAAA	-12
PB.10066.12	chr6	-	3727	7	novel_not_in_catalog	TMEM30A	novel	4594	7	NA	NA	144	-18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	399013.5018687408	NA	170	3	TRUE	NA	NA	NA	C	coding	242	729	528	1256	65.0	-25	True	ATTAAA	-34
PB.4428.1	chr16	-	1408	1	antisense	novelGene_CHD9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6986.4	chr2	+	2647	8	novel_not_in_catalog	SPAG16	novel	1059	10	NA	NA	5	-4332	any annotated donor/acceptor	FALSE	canonical	1	3387	junction_7	128631.97171713079	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	25	693	35.0	-20	True	AATAAA	-14
PB.4830.3	chr17	+	5020	8	novel_in_catalog	SPECC1	novel	614	5	NA	NA	58	1	combination_of_known_junctions	FALSE	canonical	1	27607	junction_1	145835.22221762923	NA	2	NA	TRUE	NA	NA	NA	C	coding	790	2373	101	2473	15.0	-9	True	NA	NA
PB.1402.14	chr10	+	3962	28	novel_not_in_catalog	WDFY4	novel	10079	62	NA	NA	19770	-1	any annotated donor/acceptor	FALSE	canonical	1	8383	junction_21	43826.485433263966	NA	2	NA	TRUE	NA	NA	NA	C	coding	1185	3558	25	3582	25.0	NA	False	ATTAAA	-20
PB.10343.3	chr6	+	2116	18	full-splice_match	ERMARD	ENST00000366773.7	2141	18	13	12	0	-12	multi-exon	FALSE	canonical	1	33933	junction_1	54708.183647484766	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	21	2057	35.0	13	True	ATTAAA	-2
PB.10343.2	chr6	+	2758	16	incomplete-splice_match	ERMARD	ENST00000366773.7	2141	18	0	3925	0	1109	3prime_fragment	FALSE	canonical	1	33933	junction_1	52223.59162268843	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	34	1866	60.0	0	True	NA	NA
PB.1402.10	chr10	+	7189	25	novel_not_in_catalog	WDFY4	novel	10079	62	NA	NA	-42914	2588	any annotated donor/acceptor	FALSE	canonical	1	100	junction_1	30870.84373228331	NA	2	NA	TRUE	NA	NA	NA	C	coding	1195	3588	62	3649	20.0	NA	False	AATAAA	-22
PB.10343.4	chr6	+	4273	17	novel_in_catalog	ERMARD	novel	551	6	NA	NA	4	0	intron_retention	FALSE	canonical	1	121911	junction_1	43105.6047961265	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	2608	4266	30.0	4	True	AGTAAA	-20
PB.1402.12	chr10	+	6539	44	incomplete-splice_match	WDFY4	ENST00000325239.11	10079	62	95064	1	-22798	-1	5prime_fragment	FALSE	canonical	1	63864	junction_10	38496.69952932541	NA	1	NA	TRUE	NA	NA	NA	C	coding	2050	6153	7	6159	25.0	NA	False	ATTAAA	-20
PB.10343.6	chr6	+	6431	15	novel_in_catalog	ERMARD	novel	551	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	127102	junction_7	40947.5489897174	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	4766	6424	30.0	11	True	AGTAAA	-20
PB.10916.1	chr7	+	3783	17	novel_in_catalog	KRBA1	novel	596	4	NA	NA	-63	2	combination_of_known_junctions	FALSE	canonical	1	12388	junction_2	19863.205965663623	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	108	3257	30.0	-5	True	ATTAAA	-18
PB.6320.15	chr2	+	3952	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	197	-3	any annotated donor/acceptor	FALSE	canonical	1	27200	junction_1	131591.33482194875	NA	2	NA	TRUE	NA	NA	NA	C	coding	207	624	1392	2015	40.0	0	True	AATAAA	-19
PB.2385.3	chr12	+	2644	2	full-splice_match	AC021054.1	ENST00000318291.4	2194	2	13	-463	13	0	multi-exon	FALSE	canonical	1	26385	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	288	867	1	867	20.0	-42	False	ATTAAA	-22
PB.4830.6	chr17	+	2604	6	full-splice_match	SPECC1	ENST00000395525.7	2536	6	-79	11	16	-8	multi-exon	FALSE	canonical	1	65390	junction_5	128348.15575862397	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	188	2317	65.0	-62	False	AATAAA	-12
PB.2385.1	chr12	+	2592	1	novel_in_catalog	AC021054.1	novel	2338	5	NA	NA	152	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	139	420	2	421	10.0	-210	False	NA	NA
PB.3341.3	chr14	-	1143	5	novel_in_catalog	EMC9	novel	872	5	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	90690	junction_3	110747.55368517175	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	695	1099	30.0	-11	True	AATAAA	-14
PB.10916.3	chr7	+	3822	17	novel_in_catalog	KRBA1	novel	596	4	NA	NA	-49	-3	no_combination_of_known_junctions	FALSE	canonical	1	3827	junction_1	18177.139483771916	NA	0	NA	TRUE	NA	NA	NA	C	coding	1029	3090	212	3301	25.0	9	True	ATTAAA	-13
PB.6320.13	chr2	+	3332	3	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	117	-4	any annotated donor/acceptor	FALSE	canonical	1	135	junction_1	145423.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	207	624	773	1396	40.0	1	True	AATAAA	-18
PB.10916.2	chr7	+	3657	16	novel_in_catalog	KRBA1	novel	596	4	NA	NA	-63	-2	no_combination_of_known_junctions	FALSE	canonical	1	3827	junction_1	22948.38174977341	NA	2	2	TRUE	NA	NA	NA	C	coding	969	2910	226	3135	30.0	-5	True	ATTAAA	-14
PB.4830.4	chr17	+	3861	13	full-splice_match	SPECC1	ENST00000395530.6	8133	13	4	4268	-1	3	multi-exon	FALSE	canonical	1	105582	junction_1	75922.38583909228	NA	1	NA	TRUE	NA	NA	NA	C	coding	987	2964	205	3168	10.0	-79	False	NA	NA
PB.11914.1	chr9	-	2650	8	novel_in_catalog	FBXW5	novel	1932	5	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	420815	junction_7	293255.85610270535	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	97	1230	15.0	-9	True	AATAAA	-15
PB.8800.3	chr4	-	3425	4	novel_not_in_catalog	AC093730.1	novel	448	3	NA	NA	1623	5198	any annotated donor/acceptor	FALSE	canonical	1	507	junction_1	391.51188430947474	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	1	True	AATAAA	-10
PB.10916.5	chr7	+	4041	17	full-splice_match	KRBA1	ENST00000319551.12	4020	17	-27	6	19	-2	multi-exon	TRUE	canonical	1	2244	junction_1	18809.364078228264	NA	1	NA	TRUE	NA	NA	NA	C	coding	1030	3093	427	3519	30.0	23	True	ATTAAA	-14
PB.8800.1	chr4	-	4295	3	novel_not_in_catalog	AC093730.1	novel	448	3	NA	NA	1684	6250	any annotated donor/acceptor	FALSE	canonical	1	1078	junction_1	193.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	1	True	NA	NA
PB.4830.5	chr17	+	2757	5	novel_in_catalog	SPECC1	novel	614	5	NA	NA	2	-540	combination_of_known_junctions	FALSE	canonical	1	49081	junction_1	156757.38143605072	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	359	751	20.0	-76	False	AATAAA	-14
PB.9599.2	chr5	-	3920	3	full-splice_match	PWWP2A	ENST00000523662.1	1819	3	-55	-2046	-54	-5	multi-exon	FALSE	canonical	1	35177	junction_1	27707.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	90	1652	55.0	-28	False	AATAAA	-15
PB.10459.38	chr7	+	4774	14	incomplete-splice_match	TAX1BP1	ENST00000265393.10	2478	17	87	9618	-7	-9601	intron_retention	FALSE	canonical	1	1075000	junction_1	185475.42949107682	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	96	2105	85.0	0	True	NA	NA
PB.207.1	chr1	-	4782	12	full-splice_match	SLC9A1	ENST00000263980.7	4516	12	-261	-5	-261	5	multi-exon	FALSE	canonical	1	160192	junction_8	41139.471336756	NA	0	NA	TRUE	NA	NA	NA	A	coding	815	2448	838	3285	15.0	319	False	AATAAA	-21
PB.474.2	chr1	-	4450	9	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-21	-1	intron_retention	TRUE	canonical	1	629165	junction_3	219595.2156442835	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	38	982	35.0	2	True	AATAAA	-21
PB.2556.11	chr12	-	2818	9	full-splice_match	TWF1	ENST00000395510.6	3045	9	46	181	-1	-179	multi-exon	FALSE	canonical	1	352	junction_8	26264.597978731275	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	85	1137	30.0	-14	True	ATTAAA	-20
PB.2556.13	chr12	-	2150	1	novel_in_catalog	TWF1	novel	3045	9	NA	NA	0	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	119	360	72	431	70.0	-1	True	ACTAAA	-13
PB.2556.12	chr12	-	1875	9	full-splice_match	TWF1	ENST00000395510.6	3045	9	44	1126	-3	644	multi-exon	FALSE	canonical	1	352	junction_8	26264.597978731275	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	87	1139	65.0	-16	True	TTTAAA	-13
PB.474.1	chr1	-	2842	11	full-splice_match	ZRANB2	ENST00000254821.10	2821	11	-22	1	-22	-1	multi-exon	FALSE	canonical	1	320958	junction_2	302756.1801249315	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	39	1001	25.0	1	True	AATAAA	-16
PB.11914.5	chr9	-	2265	9	full-splice_match	FBXW5	ENST00000325285.7	2274	9	8	1	8	-1	multi-exon	FALSE	canonical	1	420815	junction_8	279099.58569926256	NA	23	2	TRUE	NA	NA	NA	C	coding	566	1701	73	1773	15.0	15	True	AATAAA	-15
PB.10607.38	chr7	+	4315	32	novel_in_catalog	GTF2I	novel	538	2	NA	NA	30	0	no_combination_of_known_junctions	FALSE	canonical	1	2475	junction_8	528279.8926211648	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	360	3155	15.0	-3	True	AATAAA	-25
PB.10607.39	chr7	+	4702	35	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	34	-1	any annotated donor/acceptor	FALSE	canonical	1	3722	junction_23	541915.1616036531	NA	2	NA	TRUE	NA	NA	NA	C	coding	978	2937	607	3543	15.0	1	True	AATAAA	-24
PB.8767.11	chr4	-	2942	23	full-splice_match	NFXL1	ENST00000507489.1	3833	23	-13	904	-13	157	multi-exon	FALSE	canonical	1	5695	junction_22	37198.1264905509	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	191	2926	35.0	-7	True	ATTAAA	-16
PB.6742.2	chr2	-	5254	7	full-splice_match	FAM168B	ENST00000389915.3	944	7	179	-4489	147	-2	multi-exon	FALSE	canonical	1	260786	junction_6	168629.3522034511	NA	6	1	TRUE	NA	NA	NA	C	coding	195	588	80	667	20.0	166	False	AATAAA	-16
PB.7637.10	chr22	+	4418	20	full-splice_match	PPIL2	ENST00000398831.7	2574	20	-6	-1838	-6	-15	multi-exon	FALSE	canonical	1	225695	junction_1	78618.46496037532	NA	3	1	TRUE	NA	NA	NA	C	coding	520	1563	85	1647	90.0	4	True	TATAAA	-5
PB.7637.11	chr22	+	2454	21	novel_not_in_catalog	AP000553.1	novel	1093	7	NA	NA	13749	27666	any annotated donor/acceptor	FALSE	canonical	1	430	junction_20	108219.98908439928	NA	3	1	TRUE	NA	NA	NA	B	coding	520	1563	82	1644	30.0	7	True	ATTAAA	-11
PB.10607.32	chr7	+	3785	34	novel_in_catalog	GTF2I	novel	538	2	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	294	junction_19	549223.655924352	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	371	2002	75.0	-14	True	AAGAAA	-40
PB.10607.33	chr7	+	3483	34	full-splice_match	GTF2I	ENST00000614986.4	4415	34	199	733	-74	0	multi-exon	FALSE	canonical	1	3722	junction_22	539596.0995220877	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	118	3054	75.0	-2	True	AAGAAA	-40
PB.10607.34	chr7	+	4580	35	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	25	0	any annotated donor/acceptor	FALSE	canonical	1	2373	junction_2	542372.0836408187	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	484	3420	15.0	-8	True	AATAAA	-25
PB.7756.10	chr22	+	2878	17	novel_not_in_catalog	GGA1	novel	3159	17	NA	NA	151	4	any annotated donor/acceptor	FALSE	canonical	1	1942	junction_1	155579.73258528436	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	123	2021	0.0	3	True	AATAAA	-22
PB.10607.36	chr7	+	4211	33	full-splice_match	GTF2I	ENST00000620879.4	4352	33	139	2	-134	0	multi-exon	FALSE	canonical	1	3722	junction_21	551517.8779255119	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	178	3051	15.0	-4645	False	AATAAA	-25
PB.10607.37	chr7	+	2716	25	incomplete-splice_match	GTF2I	ENST00000614986.4	4415	34	-45	11246	28	-6	3prime_fragment	FALSE	canonical	1	3722	junction_22	553519.2798538788	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2355	362	2716	55.0	-5	True	NA	NA
PB.3650.3	chr14	-	1075	2	full-splice_match	SNHG10	ENST00000554169.1	981	2	-379	285	-38	-5	multi-exon	FALSE	canonical	1	140062	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-1	True	ATTAAA	-9
PB.4078.6	chr15	+	6177	38	full-splice_match	IQGAP1	ENST00000268182.9	7233	38	58	998	-1	-144	multi-exon	FALSE	canonical	1	634527	junction_11	249498.7952662623	NA	3	1	TRUE	NA	NA	NA	C	coding	1657	4974	67	5040	5.0	1	True	ATTAAA	-16
PB.3650.1	chr14	-	4968	1	full-splice_match	SCARNA13	ENST00000516672.1	275	1	-986	-3707	-986	3707	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	8	True	NA	NA
PB.7756.11	chr22	+	2643	15	incomplete-splice_match	GGA1	ENST00000406772.5	3205	18	7881	2	-1482	-2	5prime_fragment	FALSE	canonical	1	256649	junction_1	108673.63749874753	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	93	1793	10.0	-8156	False	AATAAA	-15
PB.6930.1	chr2	-	3007	4	novel_not_in_catalog	FTCDNL1	novel	944	4	NA	NA	-10	2464	any annotated donor/acceptor	FALSE	canonical	1	739	junction_1	23377.692933411734	NA	0	NA	TRUE	NA	NA	NA	B	coding	76	231	120	350	55.0	8	True	NA	NA
PB.9667.33	chr5	+	3885	15	novel_not_in_catalog	CANX	novel	585	5	NA	NA	-630	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	2235325.7747360873	NA	3	1	TRUE	NA	NA	NA	C	coding	392	1179	452	1630	15.0	4	True	ATTAAA	-18
PB.4078.7	chr15	+	2862	23	incomplete-splice_match	IQGAP1	ENST00000633485.1	5863	39	-4	26182	-4	433	3prime_fragment	FALSE	canonical	1	634527	junction_11	148593.8552788375	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2763	100	2862	50.0	-32	True	NA	NA
PB.474.4	chr1	-	3864	10	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-18	2	intron_retention	FALSE	canonical	1	549047	junction_1	250313.49790883838	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	35	979	30.0	5	True	AATAAA	-19
PB.4078.4	chr15	+	4748	36	incomplete-splice_match	IQGAP1	ENST00000268182.9	7233	38	24	7511	-5	-36	3prime_fragment	FALSE	canonical	1	634527	junction_11	255986.00358268953	NA	0	NA	TRUE	NA	NA	NA	C	coding	1549	4647	101	4747	65.0	-33	True	AAAAAG	-8
PB.12247.19	chrX	-	3571	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	121	338	121	-338	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	3	NA	TRUE	NA	NA	NA	C	coding	410	1233	17	1249	40.0	129	False	AATAAA	-12
PB.723.6	chr1	+	4714	10	full-splice_match	RPRD2	ENST00000401000.8	7605	10	35	2856	-23	154	multi-exon	FALSE	canonical	1	72096	junction_3	61775.210560567655	NA	1	NA	TRUE	NA	NA	NA	C	coding	1435	4308	31	4338	30.0	3	True	AATAAA	-19
PB.4078.5	chr15	+	4422	34	incomplete-splice_match	IQGAP1	ENST00000268182.9	7233	38	24	10837	-5	-214	3prime_fragment	FALSE	canonical	1	634527	junction_11	243576.2524329686	NA	0	NA	TRUE	NA	NA	NA	C	coding	1440	4320	101	4420	55.0	-33	True	AAAAAG	-3
PB.6524.8	chr2	-	6735	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	-8	1905	-2	-1905	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	186	2231	35.0	-7	True	AATAAA	-25
PB.6920.8	chr2	-	5093	28	novel_not_in_catalog	ANKRD44	novel	2798	22	NA	NA	-33	-1665	any annotated donor/acceptor	FALSE	canonical	1	4523	junction_1	44711.443533389815	NA	4	1	TRUE	NA	NA	NA	C	coding	979	2940	227	3166	75.0	-5	True	NA	NA
PB.6920.9	chr2	-	4968	28	novel_in_catalog	ANKRD44	novel	2798	22	NA	NA	-23	-1665	combination_of_known_junctions	FALSE	canonical	1	8792	junction_17	47743.8730481787	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	217	3441	75.0	5	True	NA	NA
PB.12247.10	chrX	-	3994	9	novel_not_in_catalog	LAMP2	novel	2089	9	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	1	1130	junction_8	627888.2482424595	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	143	1336	15.0	3	True	AATAAA	-22
PB.12247.11	chrX	-	3993	9	novel_not_in_catalog	LAMP2	novel	2089	9	NA	NA	239	-2	any annotated donor/acceptor	FALSE	canonical	1	8237	junction_8	625954.736282255	NA	6	NA	TRUE	NA	NA	NA	C	coding	363	1092	244	1335	15.0	247	False	AATAAA	-22
PB.12247.12	chrX	-	3854	10	novel_not_in_catalog	LAMP2	novel	2089	9	NA	NA	-15	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	599577.0073287984	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	153	1385	15.0	-7	True	AATAAA	-22
PB.6524.9	chr2	-	4689	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	28	3915	28	-3915	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	150	2195	80.0	-4	True	NA	NA
PB.1320.11	chr10	+	2693	12	novel_in_catalog	STAM	novel	2972	14	NA	NA	-6	-18	no_combination_of_known_junctions	FALSE	canonical	1	106	junction_7	106603.99411996991	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	139	1041	40.0	1	True	ATTAAA	-15
PB.1320.10	chr10	+	5193	1	novel_in_catalog	STAM	novel	2972	14	NA	NA	-7	-38764	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	4259	4576	90.0	0	True	NA	NA
PB.712.2	chr1	-	5927	10	novel_not_in_catalog	SV2A	novel	4416	13	NA	NA	-2	-370	intron_retention	FALSE	non_canonical	0	0	junction_6	111762.74055447508	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	494	1300	70.0	9918	False	TTTAAA	-9
PB.4078.3	chr15	+	7215	38	full-splice_match	IQGAP1	ENST00000268182.9	7233	38	15	3	-14	2	multi-exon	TRUE	canonical	1	634527	junction_11	249498.7952662623	NA	1	NA	TRUE	NA	NA	NA	C	coding	1657	4974	110	5083	5.0	-88	False	AATAAA	-16
PB.5272.9	chr17	+	2649	4	novel_in_catalog	SNHG16	novel	556	2	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	5201	junction_2	12199.856911729197	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	6	True	AATAAA	-17
PB.5272.8	chr17	+	2653	5	novel_not_in_catalog	SNHG16	novel	556	2	NA	NA	1	-2	intron_retention	FALSE	canonical	1	423	junction_2	97748.70429576036	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2	True	AATAAA	-17
PB.6845.20	chr2	-	1730	5	novel_not_in_catalog	SP3	novel	6359	7	NA	NA	141	-8716	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	139470.69060088394	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	912	818	1729	50.0	1124	False	NA	NA
PB.11044.1	chr8	+	2195	10	full-splice_match	PPP2R2A	ENST00000380737.7	3940	10	196	1549	73	2	multi-exon	FALSE	canonical	1	357623	junction_1	142144.80595331712	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	134	1477	10.0	-1992	False	AATAAA	-18
PB.8698.4	chr4	-	3151	15	novel_not_in_catalog	WDR1	novel	3054	15	NA	NA	61	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	1075347.9158613868	NA	1	NA	TRUE	NA	NA	NA	C	coding	659	1980	134	2113	15.0	-1	True	ATTAAA	-15
PB.9805.5	chr6	-	3562	6	novel_not_in_catalog	ZNF322	novel	4817	4	NA	NA	8	-2	any annotated donor/acceptor	FALSE	canonical	1	28	junction_5	3253.191946381277	NA	5	NA	TRUE	NA	NA	NA	C	coding	402	1209	639	1847	15.0	1	True	AATAAA	-20
PB.580.1	chr1	-	2139	1	antisense	novelGene_PRMT6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-11
PB.9805.4	chr6	-	4804	4	full-splice_match	ZNF322	ENST00000415922.6	4817	4	12	1	-5	-1	multi-exon	FALSE	canonical	1	28	junction_3	3225.133623416073	NA	2	NA	TRUE	NA	NA	NA	C	coding	402	1209	635	1843	15.0	5	True	AATAAA	-21
PB.5438.20	chr18	-	5071	30	novel_not_in_catalog	TRAPPC8	novel	6226	29	NA	NA	8	-274	any annotated donor/acceptor	FALSE	canonical	1	3325	junction_29	69742.23185515309	NA	0	NA	TRUE	NA	NA	NA	C	coding	1435	4308	221	4528	70.0	-1	True	NA	NA
PB.9585.8	chr5	+	2606	8	novel_in_catalog	CNOT8	novel	485	3	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	10552	junction_3	301300.5158927965	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	695	1255	20.0	-13	True	AATAAA	-21
PB.9805.7	chr6	-	2899	4	full-splice_match	ZNF322	ENST00000415922.6	4817	4	13	1905	-4	3	multi-exon	FALSE	canonical	1	28	junction_3	3225.133623416073	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	634	1842	25.0	6	True	AATAAA	-22
PB.6691.10	chr2	-	6210	46	novel_in_catalog	ANAPC1	novel	1536	12	NA	NA	-11	0	no_combination_of_known_junctions	TRUE	canonical	1	279	junction_43	121624.82766743326	NA	0	NA	TRUE	NA	NA	NA	C	coding	1724	5175	810	5984	30.0	0	True	AATAAA	-18
PB.608.10	chr1	-	2115	4	full-splice_match	LRIF1	ENST00000369763.4	3475	4	157	1203	43	-1166	multi-exon	FALSE	canonical	1	78626	junction_3	64235.98068061232	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1881	235	2115	75.0	-1	True	NA	NA
PB.9805.1	chr6	-	4733	3	full-splice_match	ZNF322	ENST00000607204.5	4737	3	13	-9	-4	-1	multi-exon	FALSE	canonical	1	28	junction_2	294.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	402	1209	564	1772	15.0	6	True	AATAAA	-21
PB.3845.1	chr15	-	1541	1	full-splice_match	AC090527.3	ENST00000619041.1	548	1	-994	1	-994	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-9	True	NA	NA
PB.608.11	chr1	-	2995	2	incomplete-splice_match	LRIF1	ENST00000369763.4	3475	4	118	2977	4	-2940	3prime_fragment	FALSE	canonical	1	78626	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	274	1950	15.0	-10	True	AATAAA	-16
PB.771.11	chr1	-	1963	5	novel_not_in_catalog	SLC39A1	novel	2322	4	NA	NA	33	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	528006.5088434044	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	78	971	20.0	-3	True	AATAAA	-20
PB.5272.1	chr17	+	3569	8	novel_not_in_catalog	PRCD	novel	3372	7	NA	NA	90	11769	intron_retention	FALSE	canonical	1	115	junction_3	11984.028192318545	NA	7	NA	TRUE	NA	NA	NA	A	coding	53	162	176	337	30.0	-9659	False	AATAAA	-18
PB.771.13	chr1	-	2032	4	full-splice_match	SLC39A1	ENST00000356205.8	2084	4	37	15	37	-2	multi-exon	FALSE	canonical	1	594876	junction_3	324822.8480729492	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	74	1048	30.0	1	True	AATAAA	-12
PB.771.12	chr1	-	2151	4	full-splice_match	SLC39A1	ENST00000621013.4	2322	4	159	12	-11	0	multi-exon	FALSE	canonical	1	51563	junction_3	573939.1531553381	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	190	1164	25.0	-12	True	AATAAA	-15
PB.771.15	chr1	-	3498	3	novel_in_catalog	SLC39A1	novel	2322	4	NA	NA	35	-3	intron_retention	FALSE	canonical	1	594876	junction_2	389043.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	1892	2515	30.0	-1	True	AATAAA	-11
PB.7409.5	chr20	+	2198	2	novel_not_in_catalog	LINC01749	novel	943	2	NA	NA	-14	-49759	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	1	True	AATAAA	-20
PB.412.2	chr1	-	4056	3	full-splice_match	COA7	ENST00000486918.1	908	3	-37	-3111	-37	0	multi-exon	FALSE	canonical	1	7700	junction_2	149078.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	383	787	30.0	241	False	NA	NA
PB.8689.13	chr4	+	4089	12	full-splice_match	TBC1D14	ENST00000451522.6	4149	12	63	-3	63	0	multi-exon	FALSE	canonical	1	101139	junction_1	113131.14992851776	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	123	1364	15.0	-7	True	AATAAA	-23
PB.9585.9	chr5	+	2098	5	full-splice_match	CNOT8	ENST00000524105.5	904	5	84	-1278	-2	-1	multi-exon	FALSE	canonical	1	16506	junction_1	326747.08192117035	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	360	746	20.0	-4	True	AATAAA	-22
PB.10405.1	chr7	-	1684	14	novel_in_catalog	ICA1	novel	2458	14	NA	NA	7	-3	no_combination_of_known_junctions	FALSE	canonical	1	10697	junction_13	55018.05504962699	NA	2	NA	TRUE	NA	NA	NA	C	coding	483	1452	85	1536	25.0	-14	True	AATAAA	-34
PB.10405.2	chr7	-	1849	14	full-splice_match	ICA1	ENST00000402384.7	2458	14	17	592	9	3	multi-exon	FALSE	canonical	1	57043	junction_13	44719.08009845541	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	251	1702	30.0	408	False	AATAAA	-33
PB.7409.4	chr20	+	2531	2	novel_in_catalog	LINC01749	novel	943	2	NA	NA	-15	-30087	intron_retention	FALSE	canonical	1	275	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	123	372	1722	2093	30.0	0	True	NA	NA
PB.8689.10	chr4	+	4896	14	full-splice_match	TBC1D14	ENST00000409757.8	4925	14	31	-2	31	-1	multi-exon	FALSE	canonical	1	66783	junction_1	123325.16806615096	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	94	2175	20.0	-8653	False	AATAAA	-19
PB.7341.22	chr20	+	3929	25	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	554	-366	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	342029.5265577487	NA	1	NA	TRUE	NA	NA	NA	C	coding	971	2916	866	3781	35.0	-6307	False	ATTAAA	-16
PB.6208.3	chr19	+	3563	15	novel_in_catalog	LENG8	novel	2825	16	NA	NA	-6	2	intron_retention	FALSE	canonical	1	101631	junction_4	455461.61572521727	NA	1	1	TRUE	NA	NA	NA	B	coding	763	2292	183	2474	5.0	-16	True	ATTAAA	-17
PB.5272.2	chr17	+	2959	3	full-splice_match	SNHG16	ENST00000448136.5	3607	3	-20	668	-8	-599	multi-exon	FALSE	canonical	1	423	junction_1	2461.5	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-6975	False	NA	NA
PB.7029.14	chr2	-	2117	6	incomplete-splice_match	DNPEP	ENST00000521459.5	714	8	-105	1377	-7	0	3prime_fragment	FALSE	canonical	1	349876	junction_5	203924.7007582946	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	176	739	90.0	-33	True	NA	NA
PB.1788.6	chr11	-	2203	7	novel_in_catalog	ARFIP2	novel	3846	8	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	161079	junction_6	242637.73336602037	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	139	1029	30.0	-4	True	AATAAA	-12
PB.6998.7	chr2	-	2089	5	novel_not_in_catalog	IGFBP5	novel	6215	4	NA	NA	-24	-114	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	684183.1914207992	NA	4	NA	TRUE	NA	NA	NA	C	coding	272	819	775	1593	40.0	-3	True	AATAAA	-28
PB.5272.5	chr17	+	3617	3	full-splice_match	SNHG16	ENST00000448136.5	3607	3	-11	1	0	-1	multi-exon	FALSE	canonical	1	423	junction_1	2461.5	NA	7	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	AATAAA	-18
PB.11060.6	chr8	+	3918	7	full-splice_match	FZD3	ENST00000537916.2	13740	7	-3	9825	-3	461	multi-exon	FALSE	canonical	1	16130	junction_1	36909.32196914788	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	487	2487	100.0	-46	True	NA	NA
PB.11060.7	chr8	+	1594	5	incomplete-splice_match	FZD3	ENST00000240093.7	13736	8	-51	46443	0	24706	3prime_fragment	FALSE	canonical	1	17827	junction_1	48927.75700650398	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1065	530	1594	20.0	-43	True	AATAAA	-13
PB.6208.1	chr19	+	2870	16	novel_not_in_catalog	LENG8	novel	2825	16	NA	NA	-12	2	intron_retention	FALSE	canonical	0	0	junction_15	408003.7876025935	NA	10	2	TRUE	NA	NA	NA	B	coding	761	2286	189	2474	5.0	-9460	False	ATTAAA	-17
PB.11060.2	chr8	+	3455	8	full-splice_match	FZD3	ENST00000240093.7	13736	8	-71	10352	-20	-65	multi-exon	FALSE	canonical	1	17827	junction_1	37834.66281016898	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	550	2550	15.0	-111	False	AAAACA	-11
PB.5272.4	chr17	+	1764	3	full-splice_match	SNHG16	ENST00000493536.5	2424	3	-3	663	0	-599	multi-exon	FALSE	canonical	1	5346	junction_2	390740.5	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-2	True	NA	NA
PB.2900.1	chr12	-	4986	6	full-splice_match	PPTC7	ENST00000354300.4	4996	6	5	5	5	-5	multi-exon	FALSE	canonical	1	162436	junction_5	31038.631210799227	NA	149	2	TRUE	NA	NA	NA	C	coding	304	915	285	1199	15.0	-1	True	AATAAA	-33
PB.11641.3	chr9	-	4568	16	full-splice_match	SEMA4D	ENST00000422704.6	4382	16	-31	-155	10	-1	multi-exon	FALSE	canonical	1	43754	junction_15	93714.91221747416	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	518	3100	25.0	-32	True	AATAAA	-20
PB.7514.3	chr21	+	2354	15	novel_not_in_catalog	MORC3	novel	1028	8	NA	NA	15778	30677	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	66450.87394443802	NA	1	NA	TRUE	NA	NA	NA	B	coding	584	1755	141	1895	10.0	-3	True	ATTAAA	-11
PB.2900.5	chr12	-	4101	6	full-splice_match	PPTC7	ENST00000354300.4	4996	6	2	893	2	-893	multi-exon	FALSE	canonical	1	162436	junction_5	31038.631210799227	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	288	1202	75.0	-4	True	NA	NA
PB.2900.6	chr12	-	3886	6	full-splice_match	PPTC7	ENST00000354300.4	4996	6	-20	1130	-20	-1130	multi-exon	FALSE	canonical	1	162436	junction_5	31038.631210799227	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	310	1224	60.0	7558	False	NA	NA
PB.5427.4	chr18	-	4339	29	novel_not_in_catalog	AC090772.3	novel	735	3	NA	NA	-235682	-2542	any annotated donor/acceptor	FALSE	canonical	1	212	junction_15	171207.5839986599	NA	1	NA	TRUE	NA	NA	NA	B	coding	989	2970	242	3211	20.0	-70	False	AATAAA	-17
PB.6208.7	chr19	+	3190	16	novel_in_catalog	LENG8	novel	2825	16	NA	NA	13	1	intron_retention	FALSE	canonical	1	2335	junction_15	386196.2181414118	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	160	2628	5.0	3	True	ATTAAA	-16
PB.5427.7	chr18	-	3684	29	novel_not_in_catalog	OSBPL1A	novel	4195	28	NA	NA	-1	497	any annotated donor/acceptor	FALSE	canonical	1	212	junction_15	171207.5839986599	NA	3	NA	TRUE	NA	NA	NA	C	coding	989	2970	173	3142	60.0	-1	True	NA	NA
PB.3218.45	chr13	-	2501	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	91	-996	any annotated donor/acceptor	FALSE	canonical	1	677	junction_1	90620.98741056239	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	324	1724	50.0	4	True	NA	NA
PB.8372.13	chr3	-	1876	12	novel_not_in_catalog	TPRA1	novel	4235	13	NA	NA	-14	-5	any annotated donor/acceptor	FALSE	canonical	1	2774	junction_11	196340.91671304533	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	316	1089	30.0	12	True	AATAAA	-13
PB.566.8	chr1	+	2871	10	novel_in_catalog	RTCA	novel	2535	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	345594	junction_2	109212.83124655677	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	1937	2605	35.0	5	True	AATAAA	-17
PB.6208.5	chr19	+	3485	16	novel_not_in_catalog	LENG8	novel	2825	16	NA	NA	11	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	487128.4710638047	NA	7	1	TRUE	NA	NA	NA	B	coding	763	2292	162	2453	5.0	1	True	ATTAAA	-17
PB.10738.1	chr7	-	3043	1	full-splice_match	UFSP1	ENST00000388761.3	996	1	8	-2055	8	2055	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	142	429	440	868	15.0	4	True	CATAAA	-17
PB.5790.6	chr19	+	3300	13	novel_not_in_catalog	ZNF333	novel	1756	7	NA	NA	-1	1432	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	24459.0446983433	NA	4	NA	TRUE	NA	NA	NA	C	coding	665	1998	120	2117	30.0	6	True	NA	NA
PB.566.3	chr1	+	1531	11	full-splice_match	RTCA	ENST00000370128.8	2535	11	9	995	0	3	multi-exon	FALSE	canonical	1	345594	junction_2	107029.60420411728	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	161	1261	30.0	-22	True	AATAAA	-21
PB.5427.1	chr18	-	4177	28	full-splice_match	OSBPL1A	ENST00000319481.7	4195	28	10	8	6	-7	multi-exon	FALSE	canonical	1	41387	junction_14	167437.09072997526	NA	3	NA	TRUE	NA	NA	NA	C	coding	950	2853	198	3050	20.0	-26	True	AATAAA	-16
PB.566.1	chr1	+	2430	10	novel_in_catalog	RTCA	novel	2535	11	NA	NA	-39	-2	no_combination_of_known_junctions	FALSE	canonical	1	28573	junction_5	185823.6118823107	NA	4	NA	TRUE	NA	NA	NA	C	coding	158	477	209	685	20.0	-145	False	AATAAA	-19
PB.4432.3	chr16	-	4534	26	full-splice_match	RPGRIP1L	ENST00000563746.5	4193	26	-12	-329	0	329	multi-exon	FALSE	canonical	1	4634	junction_4	17998.667506412803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1281	3846	65	3910	30.0	-13	True	ATTAAA	-28
PB.566.7	chr1	+	3014	11	full-splice_match	RTCA	ENST00000370128.8	2535	11	11	-490	2	490	multi-exon	FALSE	canonical	1	345594	junction_2	107029.60420411728	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	159	1259	20.0	-20	True	AGTAAA	-19
PB.8372.11	chr3	-	1849	10	full-splice_match	TPRA1	ENST00000393400.6	1831	10	2	-20	2	-4	multi-exon	FALSE	canonical	1	53997	junction_3	172158.20589134982	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	341	1060	30.0	0	True	AATAAA	-14
PB.566.5	chr1	+	2598	11	novel_in_catalog	RTCA	novel	2535	11	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	14970	junction_2	179329.68714970202	NA	2	NA	TRUE	NA	NA	NA	C	coding	309	930	410	1339	25.0	-22	True	AATAAA	-15
PB.566.4	chr1	+	2518	11	full-splice_match	RTCA	ENST00000370128.8	2535	11	9	8	0	-8	multi-exon	FALSE	canonical	1	345594	junction_2	107029.60420411728	NA	3	1	TRUE	NA	NA	NA	C	coding	366	1101	161	1261	30.0	-22	True	AATAAA	-13
PB.2927.1	chr12	-	2234	3	full-splice_match	LINC01234	ENST00000550223.5	1075	3	-32	-1127	-12	0	multi-exon	FALSE	canonical	1	14365	junction_1	5237.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-13	False	ATTAAA	-20
PB.10235.17	chr6	+	4400	9	full-splice_match	TNFAIP3	ENST00000237289.8	4432	9	-187	219	43	-218	multi-exon	FALSE	canonical	1	126053	junction_1	205414.7679330773	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	254	2626	40.0	-2	True	AATAAA	-25
PB.8372.10	chr3	-	2104	12	novel_not_in_catalog	TPRA1	novel	4235	13	NA	NA	21	-4	any annotated donor/acceptor	FALSE	canonical	1	165	junction_11	185512.89994699508	NA	4	NA	TRUE	NA	NA	NA	C	coding	373	1122	535	1656	30.0	0	True	AATAAA	-14
PB.5427.3	chr18	-	4066	27	novel_not_in_catalog	AC090772.3	novel	735	3	NA	NA	-235591	-2541	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	173220.0447854032	NA	3	NA	TRUE	NA	NA	NA	B	coding	871	2616	322	2937	25.0	21	True	AATAAA	-18
PB.10235.16	chr6	+	4462	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	43	-216	intron_retention	FALSE	canonical	1	71043	junction_3	284753.6249115099	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	953	2686	40.0	-2	True	AATAAA	-27
PB.5427.2	chr18	-	3040	14	full-splice_match	OSBPL1A	ENST00000399443.7	3317	14	273	4	273	-4	multi-exon	FALSE	canonical	1	172313	junction_13	81848.30279104844	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	597	1910	30.0	-6	True	AATAAA	-19
PB.10235.14	chr6	+	4614	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	40	1	intron_retention	FALSE	non_canonical	0	0	junction_4	313514.2816698109	NA	15	2	TRUE	NA	NA	NA	C	coding	771	2316	305	2620	25.0	-5	True	AATAAA	-15
PB.2271.3	chr11	+	2982	4	full-splice_match	FDX1	ENST00000260270.2	3206	4	225	-1	225	1	multi-exon	FALSE	canonical	1	177247	junction_2	37424.69519804626	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	14	568	30.0	-4642	False	ATTAAA	-18
PB.2271.2	chr11	+	1532	4	full-splice_match	FDX1	ENST00000260270.2	3206	4	46	1628	46	-1628	multi-exon	FALSE	canonical	1	177247	junction_2	37424.69519804626	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	193	747	25.0	-31	True	TATAAA	-27
PB.2271.1	chr11	+	1631	4	full-splice_match	FDX1	ENST00000260270.2	3206	4	183	1392	183	-1392	multi-exon	FALSE	canonical	1	177247	junction_2	37424.69519804626	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	56	610	45.0	-4684	False	AATAAA	-13
PB.2271.4	chr11	+	1332	4	full-splice_match	FDX1	ENST00000260270.2	3206	4	72	1802	72	-1802	multi-exon	FALSE	canonical	1	177247	junction_2	37424.69519804626	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	167	721	35.0	-5	True	AATAAA	-28
PB.4285.4	chr16	-	1618	6	full-splice_match	GDE1	ENST00000353258.7	2958	6	35	1305	13	107	multi-exon	FALSE	canonical	1	487014	junction_5	113062.87154782511	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	147	1142	35.0	-13	True	AATAAA	-24
PB.554.1	chr1	-	2876	6	novel_in_catalog	CNN3	novel	1902	7	NA	NA	90	-7	intron_retention	FALSE	canonical	1	1610548	junction_5	261281.25312054055	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	1445	2092	35.0	-24	True	AATAAA	-19
PB.554.2	chr1	-	2186	7	full-splice_match	CNN3	ENST00000370206.8	2165	7	-28	7	-28	-7	multi-exon	FALSE	canonical	1	1610548	junction_6	279446.09112253954	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	413	1402	35.0	211	False	AATAAA	-19
PB.554.3	chr1	-	1738	7	full-splice_match	CNN3	ENST00000370206.8	2165	7	169	258	114	-258	multi-exon	FALSE	canonical	1	1610548	junction_6	279446.09112253954	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	216	1205	25.0	0	True	AATAAA	-17
PB.554.4	chr1	-	1494	7	full-splice_match	CNN3	ENST00000370206.8	2165	7	168	503	113	414	multi-exon	FALSE	canonical	1	1610548	junction_6	279446.09112253954	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	217	1206	40.0	-1	True	NA	NA
PB.4285.1	chr16	-	2919	6	full-splice_match	GDE1	ENST00000353258.7	2958	6	33	6	11	-6	multi-exon	FALSE	canonical	1	487014	junction_5	113062.87154782511	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	149	1144	45.0	-15	True	AATAAA	-26
PB.4285.2	chr16	-	2590	6	full-splice_match	GDE1	ENST00000353258.7	2958	6	43	325	21	-325	multi-exon	FALSE	canonical	1	487014	junction_5	113062.87154782511	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	139	1134	15.0	-5	True	ATTAAA	-26
PB.4285.3	chr16	-	2142	6	full-splice_match	GDE1	ENST00000353258.7	2958	6	100	716	78	-22	multi-exon	FALSE	canonical	1	487014	junction_5	113062.87154782511	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	82	1077	95.0	-12	True	NA	NA
PB.2590.3	chr12	+	2827	14	full-splice_match	TROAP	ENST00000551245.5	2771	14	3	-59	3	-2	multi-exon	FALSE	canonical	1	103592	junction_3	144158.0261740238	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	109	2715	25.0	-8	True	AATAAA	-11
PB.2590.2	chr12	+	3412	12	novel_in_catalog	TROAP	novel	348	3	NA	NA	-15	2	intron_retention	FALSE	canonical	1	103592	junction_3	151398.79218051583	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	2082	3296	20.0	-1528	False	AATAAA	-15
PB.2590.1	chr12	+	3150	13	novel_in_catalog	TROAP	novel	348	3	NA	NA	-27	-2	intron_retention	FALSE	canonical	1	103592	junction_3	145124.77110892086	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	2094	3038	25.0	-1540	False	AATAAA	-11
PB.1788.8	chr11	-	2248	8	novel_in_catalog	ARFIP2	novel	3846	8	NA	NA	3	-7	intron_retention	FALSE	canonical	1	41802	junction_3	334370.276845345	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	113	721	35.0	15	False	AATAAA	-9
PB.2590.6	chr12	+	2466	16	novel_in_catalog	TROAP	novel	348	3	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	809	junction_13	144770.45801012794	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	101	2350	20.0	0	True	AATAAA	-15
PB.2590.5	chr12	+	2550	15	full-splice_match	TROAP	ENST00000257909.7	2527	15	-24	1	0	-1	multi-exon	FALSE	canonical	1	103592	junction_3	138937.19115323664	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	101	2437	25.0	0	True	AATAAA	-12
PB.2590.4	chr12	+	2952	14	novel_in_catalog	TROAP	novel	348	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	103592	junction_3	141278.6250882993	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	1895	2839	25.0	0	True	AATAAA	-12
PB.9132.2	chr5	-	5507	2	full-splice_match	MED10	ENST00000504058.1	648	2	35	-4894	35	-37	multi-exon	FALSE	canonical	1	663816	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	3708	4292	40.0	-12	True	AATAAA	-25
PB.9132.3	chr5	-	1078	4	full-splice_match	MED10	ENST00000255764.3	1141	4	17	46	-6	-46	multi-exon	FALSE	canonical	1	591853	junction_2	29437.527896660526	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	95	502	25.0	15	False	AATAAA	-16
PB.6958.5	chr2	-	3153	12	novel_in_catalog	WDR12	novel	8100	13	NA	NA	559	-7	intron_retention	FALSE	canonical	1	164490	junction_10	103913.63907011143	NA	2	NA	TRUE	NA	NA	NA	C	coding	212	639	2263	2901	30.0	5	True	ATTAAA	-21
PB.9132.1	chr5	-	3826	3	novel_in_catalog	MED10	novel	1141	4	NA	NA	-6	-37	intron_retention	FALSE	canonical	1	623891	junction_1	19962.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	15	False	AATAAA	-25
PB.6958.3	chr2	-	1960	14	novel_not_in_catalog	WDR12	novel	8100	13	NA	NA	572	989	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	139972.39565777787	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	179	1450	85.0	18	True	NA	NA
PB.4560.6	chr16	-	2506	9	novel_in_catalog	AC025287.1	novel	798	8	NA	NA	-14836	-57701	no_combination_of_known_junctions	FALSE	canonical	1	12057	junction_2	65149.64876428249	NA	1	NA	TRUE	NA	NA	NA	B	coding	420	1263	128	1390	100.0	-1	True	NA	NA
PB.6958.1	chr2	-	2845	14	novel_not_in_catalog	WDR12	novel	8100	13	NA	NA	569	2145	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	139972.39565777787	NA	7	NA	TRUE	NA	NA	NA	C	coding	423	1272	182	1453	20.0	15	True	AATAAA	-23
PB.4560.7	chr16	-	3576	10	full-splice_match	ADAT1	ENST00000566445.5	2768	10	-809	1	0	-1	multi-exon	FALSE	canonical	1	8358	junction_7	54484.84839831763	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	1400	2461	95.0	5	True	NA	NA
PB.1598.2	chr10	-	2645	5	full-splice_match	BLOC1S2	ENST00000370372.6	1249	5	19	-1415	19	0	multi-exon	FALSE	canonical	1	518169	junction_4	69743.98120402577	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	35	463	25.0	-16	True	NA	NA
PB.1598.3	chr10	-	1232	5	full-splice_match	BLOC1S2	ENST00000370372.6	1249	5	6	11	6	-11	multi-exon	FALSE	canonical	1	518169	junction_4	69743.98120402577	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	48	476	30.0	-29	True	AATAAA	-10
PB.1598.1	chr10	-	3143	5	full-splice_match	BLOC1S2	ENST00000370372.6	1249	5	7	-1901	7	486	multi-exon	FALSE	canonical	1	518169	junction_4	69743.98120402577	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	47	475	20.0	-28	True	NA	NA
PB.9293.3	chr5	-	2488	1	incomplete-splice_match	ENC1	ENST00000302351.8	5520	3	11527	4	2365	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	7921	False	AATAAA	-21
PB.9293.1	chr5	-	4766	3	full-splice_match	ENC1	ENST00000302351.8	5520	3	750	4	-25	-1	multi-exon	FALSE	canonical	1	247421	junction_2	176115.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	589	1770	382	2151	15.0	-9	True	AATAAA	-21
PB.10075.1	chr6	-	3026	6	full-splice_match	ELOVL4	ENST00000369816.4	3042	6	9	7	9	-7	multi-exon	FALSE	canonical	1	99765	junction_3	13906.892627758367	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	293	1237	35.0	2083	False	AATAAA	-18
PB.9293.7	chr5	-	2334	1	novel_in_catalog	ENC1	novel	5520	3	NA	NA	1	-1920	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-2	True	CATAAA	-13
PB.9293.4	chr5	-	2440	4	full-splice_match	ENC1	ENST00000618628.4	5657	4	696	2521	0	2	multi-exon	FALSE	canonical	1	28974	junction_3	268575.58331853047	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	573	2342	65.0	-3	True	AATGAA	-4
PB.9293.5	chr5	-	2280	4	novel_in_catalog	ENC1	novel	5520	3	NA	NA	69	2	combination_of_known_junctions	FALSE	canonical	1	15656	junction_3	272713.9750194128	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	413	2182	65.0	1	True	AATGAA	-4
PB.8554.1	chr3	-	1384	10	full-splice_match	PARL	ENST00000317096.8	1414	10	27	3	-1	2	multi-exon	FALSE	canonical	1	170786	junction_8	269331.07129784423	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	35	1174	10.0	-1	True	AATAAA	-23
PB.8554.3	chr3	-	1237	9	full-splice_match	PARL	ENST00000311101.9	1240	9	1	2	1	-2	multi-exon	FALSE	canonical	1	169062	junction_4	284332.20353990747	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	42	1031	20.0	-8	True	AATAAA	-19
PB.8554.2	chr3	-	1441	10	full-splice_match	PARL	ENST00000421484.5	1347	10	26	-120	-3	1	multi-exon	FALSE	canonical	1	38273	junction_6	297479.4165850434	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	666	1232	10.0	-3	True	AATAAA	-22
PB.9200.1	chr5	+	5447	7	novel_not_in_catalog	C5orf51	novel	563	5	NA	NA	-65	-1	intron_retention	FALSE	canonical	1	9934	junction_5	87191.73021263097	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	85	711	15.0	-60	False	AATAAA	-14
PB.8554.4	chr3	-	2464	4	incomplete-splice_match	PARL	ENST00000421484.5	1347	10	28	31325	-1	1773	3prime_fragment	FALSE	canonical	1	170786	junction_2	144222.73772267057	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	35	556	95.0	-1	True	NA	NA
PB.623.5	chr1	+	1903	11	incomplete-splice_match	LRIG2	ENST00000361127.5	11555	18	-20	31400	-20	148	3prime_fragment	FALSE	canonical	1	49172	junction_1	17932.243190688667	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	219	1535	20.0	-9	True	AATAAA	-21
PB.8198.1	chr3	+	2195	10	full-splice_match	ABHD6	ENST00000478253.5	2482	10	287	0	-54	0	multi-exon	FALSE	canonical	1	27419	junction_1	48715.58548007677	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	215	1228	25.0	-11	True	AATAAA	-21
PB.623.4	chr1	+	4499	18	novel_not_in_catalog	LRIG2	novel	11555	18	NA	NA	-30	169	any annotated donor/acceptor	FALSE	canonical	1	983	junction_3	30016.99376771783	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	735	3434	75.0	-19	True	NA	NA
PB.2937.2	chr12	-	2538	9	full-splice_match	WSB2	ENST00000315436.7	2646	9	79	29	1	-29	multi-exon	FALSE	canonical	1	223970	junction_8	250134.90872574018	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	64	1278	80.0	2	True	AAGAAA	-34
PB.4305.10	chr16	+	4454	18	full-splice_match	EEF2K	ENST00000263026.9	7388	18	7	2927	7	-1428	multi-exon	FALSE	canonical	1	93482	junction_1	38858.3954454524	NA	1	NA	TRUE	NA	NA	NA	C	coding	725	2178	468	2645	5.0	2	True	ATTAAA	-18
PB.8437.3	chr3	+	2197	19	incomplete-splice_match	RASA2	ENST00000452898.2	2562	25	-54	25351	-17	6517	3prime_fragment	FALSE	canonical	1	70841	junction_1	38861.65125051517	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	55	2112	25.0	-10	True	ATTAAA	-16
PB.2937.1	chr12	-	2767	9	full-splice_match	WSB2	ENST00000315436.7	2646	9	69	-190	-7	-23	multi-exon	FALSE	canonical	1	223970	junction_8	250134.90872574018	NA	2	NA	TRUE	NA	NA	NA	C	coding	404	1215	74	1288	80.0	428	False	NA	NA
PB.2937.6	chr12	-	2086	9	full-splice_match	WSB2	ENST00000315436.7	2646	9	118	442	17	-442	multi-exon	FALSE	canonical	1	223970	junction_8	250134.90872574018	NA	6	1	TRUE	NA	NA	NA	C	coding	404	1215	25	1239	40.0	477	False	NA	NA
PB.8437.4	chr3	+	2734	18	incomplete-splice_match	RASA2	ENST00000452898.2	2562	25	-44	25351	-7	6517	intron_retention	FALSE	canonical	1	70841	junction_1	39985.70443672386	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	45	1874	25.0	0	True	ATTAAA	-16
PB.2937.5	chr12	-	2243	9	full-splice_match	WSB2	ENST00000315436.7	2646	9	114	289	13	-289	multi-exon	FALSE	canonical	1	223970	junction_8	250134.90872574018	NA	2	NA	TRUE	NA	NA	NA	C	coding	404	1215	29	1243	25.0	473	False	NA	NA
PB.6311.3	chr2	-	2239	12	novel_in_catalog	ODC1	novel	2653	12	NA	NA	-224	218	combination_of_known_junctions	FALSE	canonical	1	1989	junction_11	1092281.8382167968	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	513	1898	15.0	-1	True	AATAAA	-20
PB.2174.3	chr11	+	3822	16	novel_not_in_catalog	UVRAG	novel	4123	15	NA	NA	22	0	any annotated donor/acceptor	FALSE	canonical	1	3530	junction_6	78886.716040042	NA	1	1	TRUE	NA	NA	NA	C	coding	552	1659	926	2584	15.0	-21	True	AATAAA	-17
PB.2139.4	chr11	+	2383	10	novel_in_catalog	RNF121	novel	2625	9	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	1131	junction_4	129270.92981108406	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	408	1103	20.0	-21	True	AATAAA	-27
PB.2139.5	chr11	+	2279	9	full-splice_match	RNF121	ENST00000361756.7	2625	9	346	0	0	0	multi-exon	FALSE	canonical	1	190171	junction_3	72731.22362335175	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	16	999	20.0	-9	True	AATAAA	-27
PB.2139.6	chr11	+	1184	8	full-splice_match	RNF121	ENST00000530137.1	2202	8	-34	1052	1	17	multi-exon	FALSE	canonical	1	46628	junction_1	108863.10434782253	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	94	960	40.0	-8	True	AAGAAA	-18
PB.2139.7	chr11	+	1968	6	novel_in_catalog	RNF121	novel	2625	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	10585	junction_2	160553.9749798802	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	89	688	20.0	1	True	AATAAA	-27
PB.12356.1	chrX	+	1971	10	full-splice_match	IKBKG	ENST00000594239.5	2299	10	327	1	-4	-1	multi-exon	FALSE	canonical	1	1337	junction_5	122072.29203869421	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	164	1387	15.0	14	True	NA	NA
PB.2139.1	chr11	+	2186	8	novel_in_catalog	RNF121	novel	2625	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	6320	junction_4	118969.93905750704	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	31	906	20.0	-24	True	AATAAA	-27
PB.2139.2	chr11	+	2254	8	full-splice_match	RNF121	ENST00000530137.1	2202	8	-50	-2	0	2	multi-exon	FALSE	canonical	1	46628	junction_1	108863.10434782253	NA	7	1	TRUE	NA	NA	NA	C	coding	288	867	110	976	20.0	-24	True	AATAAA	-25
PB.2139.3	chr11	+	2429	10	novel_in_catalog	RNF121	novel	2625	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2087	junction_3	127553.02059230985	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	409	1149	20.0	-21	True	AATAAA	-27
PB.11964.1	chrX	+	2178	7	full-splice_match	HCCS	ENST00000380762.4	1072	7	-69	-1037	-5	-162	multi-exon	FALSE	canonical	1	323820	junction_1	60054.19856263174	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	359	1072	35.0	-36	True	ATTAAA	-18
PB.11964.3	chrX	+	1127	7	full-splice_match	HCCS	ENST00000380762.4	1072	7	-58	3	6	-3	multi-exon	FALSE	canonical	1	323820	junction_1	60054.19856263174	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	348	1061	35.0	-25	True	ATTAAA	-12
PB.11964.2	chrX	+	2284	7	full-splice_match	HCCS	ENST00000321143.8	2277	7	-4	-3	-4	3	multi-exon	FALSE	canonical	1	20843	junction_1	163832.0665930174	NA	2	NA	TRUE	NA	NA	NA	C	coding	268	807	207	1013	40.0	-35	True	AATAAA	-22
PB.11964.4	chrX	+	2312	7	full-splice_match	HCCS	ENST00000380762.4	1072	7	-37	-1203	-14	4	multi-exon	FALSE	canonical	1	323820	junction_1	60054.19856263174	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	327	1040	40.0	-4	True	AATAAA	-23
PB.8433.21	chr3	+	5766	9	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	0	25	combination_of_known_junctions	FALSE	canonical	1	6908	junction_5	175152.58087517403	NA	6	NA	TRUE	NA	NA	NA	C	coding	188	567	667	1233	25.0	0	True	AATAAA	-19
PB.362.1	chr1	+	4997	10	novel_in_catalog	DMAP1	novel	1545	11	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	172944	junction_1	121692.38091866854	NA	2	NA	TRUE	NA	NA	NA	C	coding	141	426	4512	4937	0.0	-19	True	AATAGA	-20
PB.10242.14	chr6	-	2583	17	incomplete-splice_match	REPS1	ENST00000450536.6	4537	20	5	7837	5	-84	3prime_fragment	FALSE	canonical	1	194661	junction_16	101005.36039486267	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2013	571	2583	60.0	0	True	AAAAAG	-33
PB.145.30	chr1	-	3394	13	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	20	-76	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	382018.8854117686	NA	3	1	TRUE	NA	NA	NA	C	coding	553	1662	147	1808	5.0	31	True	AATAAA	-16
PB.145.31	chr1	-	3378	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	7	-76	combination_of_known_junctions	FALSE	canonical	1	10506	junction_6	461413.9986788187	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	212	1792	5.0	1	True	AATAAA	-16
PB.10242.11	chr6	-	2942	18	novel_in_catalog	REPS1	novel	4537	20	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	4204	junction_6	139934.00931736795	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	548	2746	15.0	-16	True	AATAAA	-18
PB.10242.10	chr6	-	3220	20	novel_not_in_catalog	REPS1	novel	4537	20	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	637	junction_18	156685.22678575362	NA	4	1	TRUE	NA	NA	NA	C	coding	724	2175	850	3024	15.0	0	True	AATAAA	-18
PB.10242.13	chr6	-	3005	19	full-splice_match	REPS1	ENST00000529597.5	2468	19	-613	76	4	-45	multi-exon	FALSE	canonical	1	73687	junction_8	133551.94974168498	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	572	2878	20.0	-1	True	ATTAAA	-24
PB.10863.1	chr7	-	2132	1	intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	110	333	153	485	20.0	-5036	False	NA	NA
PB.8425.12	chr3	+	1582	11	full-splice_match	ARMC8	ENST00000489213.5	1714	11	179	-47	0	0	multi-exon	FALSE	canonical	1	55065	junction_1	115366.59096640587	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	76	1149	20.0	-2	True	AATAAA	-18
PB.8425.13	chr3	+	3929	12	full-splice_match	ARMC8	ENST00000470821.5	1656	12	-2	-2271	0	1065	multi-exon	FALSE	canonical	1	152200	junction_1	95819.58200451858	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	27	1226	25.0	-2	True	AATGAA	-15
PB.8425.10	chr3	+	2802	23	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	-1	-24	combination_of_known_junctions	FALSE	canonical	1	25277	junction_1	108140.99334649624	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	198	2177	30.0	-1	True	AGTAAA	-24
PB.8425.11	chr3	+	1714	12	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	25277	junction_1	140679.3385946262	NA	2	1	TRUE	NA	NA	NA	C	coding	357	1074	209	1282	20.0	-5	True	AATAAA	-17
PB.8425.16	chr3	+	2909	12	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	25277	junction_1	140679.3385946262	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	204	1277	20.0	0	True	AATAAA	-18
PB.8425.17	chr3	+	2780	11	full-splice_match	ARMC8	ENST00000489213.5	1714	11	181	-1247	0	-5	multi-exon	FALSE	canonical	1	55065	junction_1	115366.59096640587	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	74	1147	20.0	0	True	AATAAA	-19
PB.8425.14	chr3	+	2770	13	full-splice_match	ARMC8	ENST00000471453.5	2910	13	1	139	-1	-139	multi-exon	FALSE	canonical	1	108376	junction_2	109183.31857540735	NA	2	NA	TRUE	NA	NA	NA	C	coding	385	1158	144	1301	30.0	-1	True	AATAAA	-14
PB.8425.15	chr3	+	3971	12	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	0	1056	combination_of_known_junctions	FALSE	canonical	1	25277	junction_1	140679.3385946262	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	204	1277	45.0	0	True	AATGAA	-6
PB.12162.2	chrX	+	2836	1	novel_in_catalog	GPR174	novel	5516	3	NA	NA	9	-24722	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-37	True	NA	NA
PB.12162.3	chrX	+	2770	3	full-splice_match	GPR174	ENST00000645147.1	5516	3	10	2736	10	350	multi-exon	FALSE	canonical	1	35499	junction_2	2092.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	1199	2200	35.0	-36	True	ATTAAA	-16
PB.8425.18	chr3	+	2747	22	novel_in_catalog	ARMC8	novel	4728	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	25277	junction_1	115731.36195989817	NA	2	NA	TRUE	NA	NA	NA	C	coding	631	1896	204	2099	90.0	0	True	AATATA	-40
PB.12162.1	chrX	+	5522	3	full-splice_match	GPR174	ENST00000645147.1	5516	3	11	-17	11	17	multi-exon	FALSE	canonical	1	35499	junction_2	2092.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	1198	2199	30.0	-35	True	AATAAA	-40
PB.8258.2	chr3	-	2289	5	full-splice_match	ST3GAL6-AS1	ENST00000488132.5	769	5	-463	-1057	-460	1057	multi-exon	FALSE	canonical	1	8005	junction_3	4814.095449822324	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	2	757	20.0	579	False	NA	NA
PB.8258.3	chr3	-	1835	5	novel_not_in_catalog	ST3GAL6-AS1	novel	769	5	NA	NA	-1106	1030	any annotated donor/acceptor	FALSE	canonical	1	520	junction_4	7702.830887894398	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-67	False	NA	NA
PB.8258.1	chr3	-	2859	5	novel_not_in_catalog	ST3GAL6-AS1	novel	769	5	NA	NA	-453	7821	any annotated donor/acceptor	TRUE	canonical	1	2053	junction_1	7594.54591713685	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	1	750	20.0	586	False	AATAAA	-16
PB.9453.16	chr5	-	2585	6	novel_in_catalog	AC104109.3	novel	483	3	NA	NA	0	-29930	intron_retention	FALSE	canonical	1	1872800	junction_3	71447.41755165123	NA	0	NA	TRUE	NA	NA	NA	B	coding	170	513	211	723	50.0	-1	True	AATAAA	-10
PB.9855.6	chr6	+	1660	4	full-splice_match	TUBB	ENST00000327892.12	2670	4	156	854	156	-854	multi-exon	FALSE	canonical	1	15151	junction_3	2183583.7504968755	NA	7	NA	TRUE	NA	NA	NA	C	coding	444	1335	151	1485	10.0	5	True	NA	NA
PB.9453.15	chr5	-	1737	8	novel_not_in_catalog	AC104109.3	novel	483	3	NA	NA	4	-29929	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	690060.2681458708	NA	1	1	TRUE	NA	NA	NA	B	coding	309	930	135	1064	50.0	3	True	AATAAA	-11
PB.8660.13	chr4	-	2663	5	full-splice_match	LETM1	ENST00000466175.5	1626	5	-187	-850	105	-176	multi-exon	FALSE	canonical	1	115704	junction_4	60452.663237445544	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	193	1077	55.0	-8	True	NA	NA
PB.9453.13	chr5	-	1654	7	novel_not_in_catalog	AC104109.3	novel	483	3	NA	NA	-5	-29922	any annotated donor/acceptor	FALSE	canonical	1	10536	junction_5	722875.953712995	NA	0	NA	TRUE	NA	NA	NA	B	coding	252	759	216	974	40.0	-6	True	AATAAA	-18
PB.9453.10	chr5	-	1950	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	66	2633	-3	669	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	216	1145	20.0	-6	True	AATAAA	-17
PB.9453.11	chr5	-	1825	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	59	2765	-10	537	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	7	1	TRUE	NA	NA	NA	C	coding	309	930	223	1152	50.0	-13	True	AATAAA	-11
PB.775.15	chr1	-	2903	7	novel_in_catalog	TPM3	novel	3149	7	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	511486	junction_6	694473.2463532862	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	85	543	25.0	4	True	AATAAA	-11
PB.775.14	chr1	-	3506	7	novel_in_catalog	TPM3	novel	3149	7	NA	NA	-8	-3	intron_retention	FALSE	canonical	1	511486	junction_6	683952.4284175195	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	71	529	25.0	-3	True	AATAAA	-12
PB.775.17	chr1	-	1450	9	full-splice_match	TPM3	ENST00000328159.8	1771	9	-67	388	-5	30	multi-exon	FALSE	canonical	1	96813	junction_1	743372.425071955	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	68	814	80.0	0	True	NA	NA
PB.775.16	chr1	-	1612	8	full-splice_match	TPM3	ENST00000368533.7	3131	8	-26	1545	7	-159	multi-exon	FALSE	canonical	1	380074	junction_4	711882.2453578074	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	80	826	75.0	8901	False	NA	NA
PB.336.4	chr1	-	5135	12	full-splice_match	FOXJ3	ENST00000361776.5	5106	12	-21	-8	-4	2	multi-exon	FALSE	canonical	1	88178	junction_7	95247.68307127623	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	196	1962	5.0	-5	True	AATAAA	-30
PB.771.3	chr1	-	2934	17	novel_not_in_catalog	CRTC2	novel	2290	10	NA	NA	-4910	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	336966.2288218711	NA	1	1	TRUE	NA	NA	NA	B	coding	809	2430	74	2503	20.0	1	True	AATAAA	-12
PB.775.12	chr1	-	1897	7	novel_not_in_catalog	TPM3	novel	3149	7	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	818276.9066521566	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	190	624	30.0	0	True	AATAAA	-15
PB.7110.37	chr2	+	3417	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	634146	junction_6	811219.5467521581	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	747	1331	25.0	-35	True	AATAAA	-19
PB.4123.9	chr16	-	2457	11	novel_not_in_catalog	LUC7L	novel	2737	10	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	7997	junction_9	297930.4736760743	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1259	2077	5.0	-34	True	AATAAA	-20
PB.4123.8	chr16	-	2536	10	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	1	-1	intron_retention	FALSE	canonical	1	113103	junction_9	265336.87630088493	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1336	2154	5.0	-34	True	AATAAA	-22
PB.4123.6	chr16	-	2527	10	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	113103	junction_9	227167.10564012913	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	1343	2299	10.0	-41	True	AATAAA	-43
PB.4123.5	chr16	-	2672	11	full-splice_match	LUC7L	ENST00000490762.5	2643	11	-6	-23	-6	2	multi-exon	FALSE	canonical	1	8024	junction_4	304716.69998122845	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	1344	1970	15.0	5215	False	AATAAA	-42
PB.4123.4	chr16	-	3436	9	incomplete-splice_match	LUC7L	ENST00000397783.5	1504	10	14	-4	1	2	intron_retention	FALSE	canonical	1	150004	junction_1	231663.9700419756	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	2212	3030	15.0	-34	True	AATAAA	-42
PB.4123.2	chr16	-	3491	10	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	-14	2	intron_retention	FALSE	canonical	1	84829	junction_8	264407.7568405135	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	2403	3260	15.0	5195	False	AATAAA	-42
PB.4123.1	chr16	-	2564	11	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	84829	junction_8	284835.3075769224	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	1500	2357	5.0	-35	True	AATAAA	-22
PB.771.4	chr1	-	2663	14	novel_not_in_catalog	CRTC2	novel	2290	10	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	149493.80766997888	NA	2	1	TRUE	NA	NA	NA	B	coding	698	2097	136	2232	20.0	-39	True	AATAAA	-12
PB.9485.3	chr5	-	1662	4	novel_in_catalog	MZB1	novel	1096	4	NA	NA	-2	0	intron_retention	TRUE	canonical	1	80300	junction_3	511744.5604709009	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	1073	1465	20.0	-4	True	AATAAA	-15
PB.9639.3	chr5	+	2115	7	novel_not_in_catalog	ZNF346	novel	1276	4	NA	NA	6	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	77909.12762903117	NA	8	1	TRUE	NA	NA	NA	C	coding	237	714	30	743	45.0	14	True	AATAAA	-21
PB.4665.14	chr17	-	5515	24	novel_in_catalog	CLUH	novel	5224	26	NA	NA	29	-10	intron_retention	FALSE	canonical	1	119666	junction_23	144140.81711313277	NA	47	2	TRUE	NA	NA	NA	B	coding	1060	3183	103	3285	20.0	-9	True	AATAAA	-10
PB.4665.15	chr17	-	4378	26	novel_in_catalog	CLUH	novel	5224	26	NA	NA	28	-977	combination_of_known_junctions	FALSE	canonical	1	119666	junction_25	139801.38651899557	NA	0	NA	TRUE	NA	NA	NA	B	coding	1348	4047	104	4150	20.0	-10	True	AATAGA	-30
PB.771.6	chr1	-	2384	14	novel_not_in_catalog	CRTC2	novel	2290	10	NA	NA	38	-17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	169842.02495915093	NA	0	NA	TRUE	NA	NA	NA	B	coding	552	1659	312	1970	70.0	9638	False	ATTAAA	-17
PB.2174.4	chr11	+	3200	13	novel_not_in_catalog	UVRAG	novel	4123	15	NA	NA	22	48148	any annotated donor/acceptor	FALSE	canonical	1	1956	junction_12	68814.1447258786	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	220	1467	20.0	-21	True	AATAAA	-24
PB.4665.13	chr17	-	5026	25	novel_not_in_catalog	CLUH	novel	5224	26	NA	NA	64	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	178301.33370469572	NA	1	1	TRUE	NA	NA	NA	B	coding	1251	3756	68	3823	10.0	-6	True	AATAAA	-18
PB.11460.3	chr9	-	4580	10	full-splice_match	ZDHHC21	ENST00000380916.8	9160	10	116	4464	-90	-4464	multi-exon	FALSE	canonical	1	59266	junction_7	33911.138061369806	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	352	1149	45.0	-19	True	AATAAA	-15
PB.771.8	chr1	-	2154	4	novel_not_in_catalog	SLC39A1	novel	2322	4	NA	NA	-6	5	any annotated donor/acceptor	FALSE	canonical	1	2722	junction_3	596624.0295380519	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	187	1161	20.0	4225	False	AATAAA	-21
PB.5831.1	chr19	+	5963	28	novel_not_in_catalog	MAST3	novel	5896	27	NA	NA	-23	-1	any annotated donor/acceptor	FALSE	canonical	1	36502	junction_2	45896.43384474761	NA	4	NA	TRUE	NA	NA	NA	B	coding	1324	3975	24	3998	20.0	-8	True	AATAAA	-21
PB.8749.9	chr4	+	2817	10	novel_not_in_catalog	N4BP2	novel	9744	18	NA	NA	0	17907	any annotated donor/acceptor	FALSE	canonical	1	3358	junction_2	30804.36123523926	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	416	2815	65.0	86	True	NA	NA
PB.7524.12	chr21	-	1236	6	full-splice_match	HMGN1	ENST00000380749.9	1383	6	138	9	5	-9	multi-exon	FALSE	canonical	1	130662	junction_2	325337.9727664141	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	146	448	45.0	-4	True	AATAAA	-10
PB.1345.18	chr10	+	2258	13	incomplete-splice_match	WAC	ENST00000354911.8	3042	14	578	583	-126	0	5prime_fragment	FALSE	canonical	1	714083	junction_1	210149.2194889278	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	96	1904	95.0	-7451	False	NA	NA
PB.7074.4	chr2	+	3455	7	full-splice_match	EIF4E2	ENST00000409098.5	3448	7	-9	2	0	0	multi-exon	FALSE	canonical	1	118451	junction_6	356760.3126007712	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	52	756	20.0	-15	True	AATAAA	-18
PB.1345.10	chr10	+	2992	15	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-194	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	452689.53853597987	NA	2	NA	TRUE	NA	NA	NA	C	coding	650	1953	117	2069	65.0	-12	True	AATAAA	-7
PB.1345.11	chr10	+	2977	15	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-194	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	348519.0868861037	NA	2	NA	TRUE	NA	NA	NA	C	coding	645	1938	117	2054	65.0	-12	True	AATAAA	-7
PB.1345.12	chr10	+	3455	15	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-189	449	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	423074.1475111252	NA	2	NA	TRUE	NA	NA	NA	C	coding	651	1956	114	2069	30.0	-7	True	AATAAA	-22
PB.1345.13	chr10	+	3434	15	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-186	449	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	348519.0868861037	NA	2	NA	TRUE	NA	NA	NA	C	coding	645	1938	111	2048	30.0	-4	True	AATAAA	-22
PB.1345.14	chr10	+	2671	14	full-splice_match	WAC	ENST00000354911.8	3042	14	-212	583	-106	0	multi-exon	FALSE	canonical	1	583337	junction_1	237911.1635946215	NA	1	NA	TRUE	NA	NA	NA	C	coding	645	1938	380	2317	95.0	-8241	False	NA	NA
PB.1345.15	chr10	+	3158	13	novel_in_catalog	WAC	novel	5924	14	NA	NA	-33	449	combination_of_known_junctions	FALSE	canonical	1	8317	junction_1	414283.26777647634	NA	2	NA	TRUE	NA	NA	NA	C	coding	499	1500	273	1772	30.0	0	True	AATAAA	-22
PB.1345.16	chr10	+	2429	14	novel_in_catalog	WAC	novel	5924	14	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	8317	junction_1	344447.32136203256	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	267	2075	95.0	6	True	NA	NA
PB.1345.17	chr10	+	2419	14	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	461774.47201860254	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	260	2065	95.0	-7701	False	NA	NA
PB.7718.8	chr22	-	2310	1	novel_in_catalog	EIF4ENIF1	novel	3115	17	NA	NA	3204	-14950	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	4300	False	NA	NA
PB.7718.2	chr22	-	3597	19	full-splice_match	EIF4ENIF1	ENST00000330125.9	3544	19	-50	-3	33	-1	multi-exon	FALSE	canonical	1	94748	junction_18	46996.10117073543	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	141	3083	20.0	50	True	ATTAAA	-29
PB.11115.4	chr8	-	1657	3	full-splice_match	THAP1	ENST00000254250.7	2161	3	-12	516	-12	-514	multi-exon	FALSE	canonical	1	190433	junction_2	4589.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	244	885	15.0	-13	True	ATTAAA	-17
PB.7718.1	chr22	-	3815	19	novel_in_catalog	EIF4ENIF1	novel	597	3	NA	NA	-274	-1	combination_of_known_junctions	FALSE	canonical	1	8518	junction_18	64827.95154060182	NA	2	NA	TRUE	NA	NA	NA	C	coding	1021	3066	230	3295	15.0	6196	False	ATTAAA	-35
PB.7718.6	chr22	-	1935	10	novel_not_in_catalog	EIF4ENIF1	novel	3115	17	NA	NA	43	-9427	any annotated donor/acceptor	FALSE	canonical	1	1775	junction_9	74799.31774050111	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	354	1862	35.0	11	True	AATAAA	-18
PB.7718.7	chr22	-	1790	10	incomplete-splice_match	EIF4ENIF1	ENST00000330125.9	3544	19	-118	14690	-35	-9427	3prime_fragment	FALSE	canonical	1	94748	junction_9	50643.20656207394	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	194	1717	35.0	-18	True	AATAAA	-18
PB.7718.4	chr22	-	3682	20	novel_in_catalog	EIF4ENIF1	novel	597	3	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	1058	junction_5	80212.75792689231	NA	5	NA	TRUE	NA	NA	NA	C	coding	667	2004	159	2162	40.0	32	True	ATTAAA	-22
PB.7718.5	chr22	-	3414	19	full-splice_match	EIF4ENIF1	ENST00000330125.9	3544	19	-48	178	35	-174	multi-exon	FALSE	canonical	1	94748	junction_18	46996.10117073543	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	139	3081	35.0	52	True	AATAAA	-21
PB.501.6	chr1	-	2379	6	full-splice_match	CTBS	ENST00000477677.5	2892	6	5	508	5	-508	multi-exon	FALSE	canonical	1	96282	junction_4	76378.52340913643	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	470	1009	55.0	-36	True	AATAAA	-7
PB.8616.36	chr3	-	4936	19	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	2	-50	any annotated donor/acceptor	FALSE	canonical	1	1510	junction_7	449839.1298696316	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	70	2328	25.0	1	True	TATAAA	-13
PB.11602.3	chr9	+	3645	3	novel_in_catalog	C9orf85	novel	902	3	NA	NA	-2	-58	no_combination_of_known_junctions	FALSE	canonical	1	6440	junction_2	52946.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.8281.1	chr3	-	6610	19	novel_in_catalog	CBLB	novel	6749	19	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	65035	junction_18	42127.74459407165	NA	2	NA	TRUE	NA	NA	NA	C	coding	982	2949	150	3098	20.0	-4	True	TATAAA	-20
PB.11038.8	chr8	-	5435	13	full-splice_match	ENTPD4	ENST00000358689.8	5861	13	40	386	-8	-386	multi-exon	FALSE	canonical	1	144087	junction_12	78344.02740419796	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	197	2047	55.0	-9	True	ACTAAA	-27
PB.8749.3	chr4	+	6895	18	novel_not_in_catalog	N4BP2	novel	9744	18	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	39085.10263098641	NA	10	1	TRUE	NA	NA	NA	C	coding	1771	5316	420	5735	95.0	-27	True	NA	NA
PB.501.5	chr1	-	2599	7	full-splice_match	CTBS	ENST00000370630.5	6600	7	-12	4013	4	-498	multi-exon	FALSE	canonical	1	190444	junction_6	46708.689479462904	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	62	1219	25.0	-37	True	AATAAA	-17
PB.2123.1	chr11	+	5159	23	full-splice_match	LRP5	ENST00000294304.11	5159	23	5	-5	5	5	multi-exon	TRUE	canonical	1	66303	junction_1	82862.58955446351	NA	0	NA	TRUE	NA	NA	NA	C	coding	1615	4848	102	4949	5.0	-11	False	TATAAA	-26
PB.1660.10	chr10	+	3321	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-19	7749	-19	-7749	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	232	2412	10.0	-19	True	ATTAAA	-19
PB.2123.3	chr11	+	5029	23	full-splice_match	LRP5	ENST00000294304.11	5159	23	33	97	33	-4	multi-exon	FALSE	canonical	1	66303	junction_1	82862.58955446351	NA	0	NA	TRUE	NA	NA	NA	C	coding	1615	4848	74	4921	60.0	17	True	AATAAA	-16
PB.2123.2	chr11	+	3618	11	incomplete-splice_match	LRP5	ENST00000294304.11	5159	23	14	36632	14	-552	3prime_fragment	FALSE	canonical	1	66303	junction_1	84877.51659945052	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	93	2819	85.0	-2	True	NA	NA
PB.10067.30	chr6	+	4195	22	novel_not_in_catalog	SENP6	novel	4644	23	NA	NA	-48	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	162649.4829622759	NA	1	1	TRUE	NA	NA	NA	C	coding	953	2862	1017	3878	30.0	-1	True	AATAAA	-26
PB.10067.31	chr6	+	4922	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-47	631	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	154944.30375017854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1111	3336	646	3981	30.0	0	True	GATAAA	-19
PB.10067.32	chr6	+	3229	18	incomplete-splice_match	SENP6	ENST00000370010.6	4644	23	374	12940	-44	4975	3prime_fragment	FALSE	canonical	1	103972	junction_5	112078.35491356699	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2586	643	3228	65.0	3	True	AATAAA	-15
PB.5132.9	chr17	+	3298	15	novel_not_in_catalog	MSI2	novel	1714	14	NA	NA	28	1521	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	163326.36612718483	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	182	1222	85.0	11	True	CATAAA	-23
PB.10067.34	chr6	+	4304	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-17	163	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	154944.30375017854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1111	3336	496	3831	35.0	2	True	ATTAAA	-15
PB.10067.35	chr6	+	3434	16	incomplete-splice_match	SENP6	ENST00000447266.6	6501	24	-17	38487	-17	-76	3prime_fragment	FALSE	canonical	1	56267	junction_5	149563.92376639496	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	496	2574	30.0	2	True	AATAAA	-19
PB.10067.36	chr6	+	3755	25	novel_in_catalog	SENP6	novel	4644	23	NA	NA	276	0	combination_of_known_junctions	FALSE	canonical	1	48214	junction_2	176193.74713411293	NA	0	NA	TRUE	NA	NA	NA	C	coding	1003	3012	461	3472	70.0	-11	False	NA	NA
PB.10067.37	chr6	+	4796	22	novel_not_in_catalog	SENP6	novel	4644	23	NA	NA	3240	-1065	any annotated donor/acceptor	FALSE	canonical	1	12229	junction_7	172437.03637667833	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	1051	3177	40.0	3259	False	AATAAA	-9
PB.1397.17	chr10	-	2368	10	full-splice_match	NCOA4	ENST00000581486.5	3549	10	88	1093	-11	-11	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	116	1960	10.0	-20	True	AGTAAA	-26
PB.1397.16	chr10	-	2637	10	full-splice_match	NCOA4	ENST00000581486.5	3549	10	87	825	-12	257	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	614	1845	117	1961	35.0	-21	True	ATTAAA	-21
PB.1397.15	chr10	-	3345	10	novel_not_in_catalog	NCOA4	novel	3489	10	NA	NA	4	-75	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	78	1919	40.0	18	True	AATATA	-16
PB.2624.2	chr12	+	4705	29	full-splice_match	TNS2	ENST00000314276.7	4944	29	238	1	-2	1	multi-exon	FALSE	canonical	1	33855	junction_1	98938.14846696611	NA	4	NA	TRUE	NA	NA	NA	C	coding	1386	4161	57	4217	35.0	-2	True	AATAAA	-17
PB.1397.11	chr10	-	3298	9	novel_in_catalog	NCOA4	novel	3489	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	449	1795	10.0	-10	True	ATTAAA	-15
PB.8220.7	chr3	-	4385	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	-29	2493	1	-472	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	247	3528	40.0	0	True	AATAAA	-24
PB.8220.6	chr3	-	4823	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	-8	2034	-8	-13	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	1	NA	TRUE	NA	NA	NA	C	coding	1093	3282	226	3507	60.0	21	True	NA	NA
PB.1411.8	chr10	+	2629	6	full-splice_match	ASAH2B	ENST00000374006.1	632	6	-11	-1986	1	-393	multi-exon	FALSE	canonical	1	536	junction_3	5814.750326540255	NA	3	1	TRUE	NA	NA	NA	C	coding	165	498	77	574	15.0	1	True	AATAAA	-24
PB.1411.9	chr10	+	2942	5	novel_in_catalog	ASAH2B	novel	3715	6	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	722	junction_3	6126.809503118242	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	3	True	AATAAA	-17
PB.8220.3	chr3	-	5702	18	novel_not_in_catalog	TMF1	novel	6849	17	NA	NA	0	5	any annotated donor/acceptor	FALSE	canonical	1	2274	junction_1	90012.33764119905	NA	1	NA	TRUE	NA	NA	NA	C	coding	1093	3282	248	3529	45.0	-1	True	AATAAA	-7
PB.5945.6	chr19	+	3268	3	full-splice_match	ZNF146	ENST00000456324.5	3780	3	505	7	1	-7	multi-exon	FALSE	canonical	1	134215	junction_1	280516.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	945	1823	40.0	1	True	ATTAAA	-16
PB.8220.1	chr3	-	6876	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	-29	2	1	-2	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	3	1	TRUE	NA	NA	NA	C	coding	1093	3282	247	3528	30.0	0	True	AATAAA	-15
PB.3267.1	chr13	+	5588	5	novel_not_in_catalog	ATP11A	novel	8858	30	NA	NA	-187	-17	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	65292.64520602608	NA	4	NA	TRUE	NA	NA	NA	B	coding	130	393	168	560	50.0	-321	False	AATAAA	-28
PB.1411.3	chr10	+	3002	6	full-splice_match	ASAH2B	ENST00000643851.1	5005	6	-2	2005	-2	-4	multi-exon	FALSE	canonical	1	536	junction_3	25484.7890993824	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	61	558	50.0	-2	True	AATAAA	-18
PB.3267.2	chr13	+	5240	4	novel_not_in_catalog	ATP11A	novel	8858	30	NA	NA	-50	-347	any annotated donor/acceptor	FALSE	canonical	1	387	junction_1	66579.32014438784	NA	4	NA	TRUE	NA	NA	NA	B	coding	110	333	151	483	35.0	-184	False	AATAAA	-20
PB.1411.6	chr10	+	3074	6	novel_not_in_catalog	ASAH2B	novel	3715	6	NA	NA	1	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7886.740264519936	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	148	630	50.0	1	True	AATAAA	-18
PB.1411.7	chr10	+	2680	6	full-splice_match	ASAH2B	ENST00000647317.1	5482	6	352	2450	1	-397	multi-exon	FALSE	canonical	1	536	junction_3	25100.379240162885	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	147	629	25.0	1	True	AATAAA	-20
PB.1411.4	chr10	+	2531	5	novel_in_catalog	ASAH2B	novel	3715	6	NA	NA	0	-400	combination_of_known_junctions	FALSE	canonical	1	722	junction_3	27546.417728762844	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	1	483	30.0	0	True	AATAAA	-17
PB.1411.5	chr10	+	5140	6	full-splice_match	ASAH2B	ENST00000647317.1	5482	6	351	-9	0	9	multi-exon	FALSE	canonical	1	536	junction_3	25100.379240162885	NA	3	NA	TRUE	NA	NA	NA	C	coding	160	483	148	630	35.0	0	True	AATAAA	-18
PB.5945.8	chr19	+	2405	3	full-splice_match	ZNF146	ENST00000456324.5	3780	3	504	871	0	-871	multi-exon	FALSE	canonical	1	134215	junction_1	280516.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	946	1824	65.0	0	True	AATAGA	-28
PB.3680.1	chr14	+	2983	9	novel_not_in_catalog	TNFAIP2	novel	572	4	NA	NA	2	0	intron_retention	TRUE	canonical	0	0	junction_2	315417.5254571312	NA	2	1	TRUE	NA	NA	NA	B	coding	221	666	246	911	30.0	2	True	TATAAA	-10
PB.11897.1	chr9	+	2427	1	intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	198	597	1029	1625	80.0	-9149	False	NA	NA
PB.3680.2	chr14	+	3260	10	incomplete-splice_match	TNFAIP2	ENST00000333007.5	4175	11	1227	0	-12	0	5prime_fragment	FALSE	canonical	1	312522	junction_1	133728.03561706873	NA	1	NA	TRUE	NA	NA	NA	B	coding	379	1140	42	1181	15.0	-9812	False	TATAAA	-17
PB.11617.13	chr9	-	2362	7	incomplete-splice_match	TLE1	ENST00000376499.7	3893	20	-225	49919	-225	-133	3prime_fragment	FALSE	canonical	1	20601	junction_2	19842.31891690082	NA	0	NA	TRUE	NA	NA	NA	B	coding	200	603	1291	1893	65.0	91	False	AAGAAA	-17
PB.7279.22	chr20	+	2934	14	novel_in_catalog	RPN2	novel	791	6	NA	NA	17	-30	intron_retention	FALSE	canonical	1	8753	junction_2	1012339.4571555532	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	210	1244	80.0	17	True	AAGAAA	-29
PB.7279.21	chr20	+	1732	15	novel_in_catalog	RPN2	novel	791	6	NA	NA	2	-19	combination_of_known_junctions	FALSE	canonical	1	8753	junction_2	977200.0662583932	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	225	1649	65.0	2	True	AAGAAA	-40
PB.3680.3	chr14	+	2846	11	novel_in_catalog	TNFAIP2	novel	572	4	NA	NA	-55	0	intron_retention	FALSE	canonical	1	312522	junction_1	156595.2490947283	NA	1	NA	TRUE	NA	NA	NA	B	coding	441	1326	85	1410	15.0	-9855	False	TATAAA	-17
PB.716.1	chr1	-	2720	2	novel_not_in_catalog	AC244033.2	novel	2941	6	NA	NA	-10	-16561	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	518	False	NA	NA
PB.11617.11	chr9	-	2536	7	incomplete-splice_match	TLE1	ENST00000418319.5	936	9	-1094	13016	-237	-1	3prime_fragment	FALSE	canonical	1	20601	junction_2	25590.40796481282	NA	22	NA	TRUE	NA	NA	NA	B	coding	210	633	1303	1935	10.0	4	True	AATAAA	-17
PB.9693.2	chr6	+	2857	3	novel_not_in_catalog	GMDS-DT	novel	594	4	NA	NA	0	-4049	any annotated donor/acceptor	FALSE	canonical	1	1915	junction_2	35124.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	6	True	AATAAA	-19
PB.9693.3	chr6	+	2928	5	incomplete-splice_match	GMDS-DT	ENST00000456943.6	2308	6	-6	9467	0	4294	3prime_fragment	FALSE	canonical	1	927	junction_4	28226.57046450206	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	870	1235	40.0	9	True	NA	NA
PB.8421.10	chr3	+	1702	3	full-splice_match	NCK1	ENST00000469404.1	2403	3	3	698	3	-1	multi-exon	FALSE	canonical	1	32026	junction_1	197113.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	89	1030	10.0	-29	True	AATAAA	-20
PB.9693.1	chr6	+	3467	3	full-splice_match	GMDS-DT	ENST00000530833.5	724	3	-66	-2677	-9	2677	multi-exon	FALSE	canonical	1	55617	junction_2	8273.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	2281	2625	100.0	-3	True	AAAAAG	-23
PB.4663.16	chr17	-	2642	10	full-splice_match	METTL16	ENST00000263092.10	5711	10	-6	3075	-1	437	multi-exon	FALSE	canonical	1	143183	junction_4	19322.664070087027	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	135	1823	15.0	-5	True	ATTAAA	-15
PB.999.1	chr1	+	2913	14	full-splice_match	ODR4	ENST00000287859.10	3792	14	-11	890	-11	-890	multi-exon	FALSE	non_canonical	0	0	junction_11	72862.76806874038	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	137	1501	60.0	11	True	AAGAAA	-8
PB.4663.14	chr17	-	2915	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	0	-1010	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	54667.75819813723	NA	1	1	TRUE	NA	NA	NA	C	coding	562	1689	131	1819	100.0	-1	True	NA	NA
PB.4663.15	chr17	-	2457	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	0	-1010	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	54667.75819813723	NA	5	NA	TRUE	NA	NA	NA	C	coding	562	1689	131	1819	100.0	-1	True	NA	NA
PB.4663.12	chr17	-	3230	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	-3	-1010	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	54667.75819813723	NA	3	1	TRUE	NA	NA	NA	C	coding	562	1689	137	1825	100.0	-7	True	NA	NA
PB.4663.13	chr17	-	3221	10	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	25	-1010	any annotated donor/acceptor	FALSE	canonical	1	65	junction_1	73059.82664118159	NA	11	NA	TRUE	NA	NA	NA	C	coding	344	1035	642	1676	100.0	-3	True	NA	NA
PB.4663.10	chr17	-	3272	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	-2	-1010	any annotated donor/acceptor	FALSE	canonical	1	1342	junction_1	54288.634588189816	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	136	1824	100.0	-6	True	NA	NA
PB.4663.11	chr17	-	3283	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	6	-1010	any annotated donor/acceptor	FALSE	canonical	1	10	junction_1	54664.93189248479	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	123	1811	100.0	7	True	NA	NA
PB.1759.1	chr11	-	1952	9	full-splice_match	CTSD	ENST00000236671.6	2123	9	168	3	72	-3	multi-exon	FALSE	canonical	1	2865120	junction_8	1493929.5105004483	NA	1	1	TRUE	NA	NA	NA	A	coding	377	1134	71	1204	0.0	163	False	AATACA	-25
PB.8648.3	chr4	-	4156	25	novel_in_catalog	GAK	novel	2281	2	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	1	13925	junction_24	142541.65147683345	NA	3	NA	TRUE	NA	NA	NA	C	coding	1221	3666	97	3762	10.0	32	True	ATTAAA	-13
PB.4588.6	chr16	+	4679	16	full-splice_match	GSE1	ENST00000253458.11	7495	16	89	2727	-47	123	multi-exon	FALSE	canonical	1	39429	junction_1	113716.22268076891	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	88	3741	80.0	-22	True	NA	NA
PB.4588.7	chr16	+	7374	16	full-splice_match	GSE1	ENST00000253458.11	7495	16	111	10	-25	-10	multi-exon	FALSE	canonical	1	39429	junction_1	113716.22268076891	NA	13	NA	TRUE	NA	NA	NA	C	coding	1217	3654	66	3719	55.0	0	True	AATAAA	-9
PB.4588.4	chr16	+	4735	15	novel_in_catalog	GSE1	novel	2683	3	NA	NA	29	124	combination_of_known_junctions	FALSE	canonical	1	46640	junction_1	110484.08379287498	NA	2	NA	TRUE	NA	NA	NA	C	coding	1154	3465	332	3796	80.0	-1	True	NA	NA
PB.4588.5	chr16	+	7446	15	novel_in_catalog	GSE1	novel	2683	3	NA	NA	42	-2	combination_of_known_junctions	FALSE	canonical	1	46640	junction_1	110484.08379287498	NA	3	NA	TRUE	NA	NA	NA	C	coding	1154	3465	319	3783	35.0	12	True	AATAAA	-17
PB.2097.1	chr11	-	4042	22	full-splice_match	PC	ENST00000393958.6	4005	22	-37	0	-37	0	multi-exon	TRUE	canonical	1	116803	junction_21	48528.994638850665	NA	0	NA	TRUE	NA	NA	NA	A	coding	1178	3537	132	3668	10.0	-31	False	AATAAA	-18
PB.4588.3	chr16	+	5072	16	novel_in_catalog	GSE1	novel	2683	3	NA	NA	28	241	no_combination_of_known_junctions	FALSE	canonical	1	47042	junction_1	112728.52218698789	NA	3	NA	TRUE	NA	NA	NA	C	coding	1227	3684	333	4016	20.0	-2	True	ATTAAA	-33
PB.103.6	chr1	+	2382	10	full-splice_match	TNFRSF1B	ENST00000376259.6	3683	10	-18	1319	-18	-1319	multi-exon	FALSE	canonical	1	190458	junction_1	102960.58930388108	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	108	1493	75.0	-6	True	NA	NA
PB.4588.1	chr16	+	6086	16	novel_in_catalog	GSE1	novel	2683	3	NA	NA	-1103	124	no_combination_of_known_junctions	TRUE	canonical	1	47042	junction_1	112728.52218698789	NA	4	NA	TRUE	NA	NA	NA	C	coding	1227	3684	1464	5147	80.0	-17	True	NA	NA
PB.103.8	chr1	+	2219	10	full-splice_match	TNFRSF1B	ENST00000376259.6	3683	10	-17	1481	-17	-1481	multi-exon	FALSE	canonical	1	190458	junction_1	102960.58930388108	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	107	1492	55.0	-5	True	NA	NA
PB.103.9	chr1	+	2409	10	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	-12	-5519	any annotated donor/acceptor	FALSE	canonical	1	5674	junction_9	149505.081097435	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	102	1340	10.0	0	True	TATAAA	-20
PB.6414.38	chr2	-	1803	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	53	-24	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1632	172	1803	55.0	-13	True	AAGAAA	-10
PB.992.8	chr1	-	2956	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	22	1414	22	541	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	257	2449	40.0	-7	True	ATTAAA	-19
PB.992.9	chr1	-	2245	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	355	1792	355	163	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	383	2116	35.0	326	False	AATAAA	-23
PB.8256.1	chr3	-	2133	7	full-splice_match	CPOX	ENST00000647941.1	2705	7	564	8	563	-8	multi-exon	FALSE	canonical	1	320765	junction_6	101471.3905158603	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	207	908	60.0	659	False	AATAAA	-11
PB.8256.2	chr3	-	2604	7	full-splice_match	CPOX	ENST00000647941.1	2705	7	-28	129	9	-129	multi-exon	FALSE	canonical	1	320765	junction_6	101471.3905158603	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	136	1500	35.0	0	True	AATAAA	-22
PB.999.7	chr1	+	2845	15	novel_not_in_catalog	ODR4	novel	1900	13	NA	NA	-37	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	83719.2092093126	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	194	1558	45.0	-46	False	NA	NA
PB.3379.10	chr14	-	1770	13	novel_in_catalog	SNX6	novel	3398	13	NA	NA	-6	-76	combination_of_known_junctions	FALSE	canonical	1	53091	junction_10	220380.37994958222	NA	3	NA	TRUE	NA	NA	NA	C	coding	369	1110	24	1133	25.0	0	True	AATAAA	-15
PB.999.6	chr1	+	2764	13	novel_in_catalog	ODR4	novel	1900	13	NA	NA	-49	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	74069.72437545285	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	2199	2609	15.0	2	True	ATTAAA	-11
PB.4613.1	chr16	-	2421	1	full-splice_match	AC009113.1	ENST00000570267.2	2443	1	21	1	21	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	108	327	17	343	25.0	-1	True	NA	NA
PB.3379.12	chr14	-	1660	14	full-splice_match	SNX6	ENST00000362031.8	2001	14	31	310	1	-59	multi-exon	FALSE	canonical	1	281529	junction_5	182746.41307920002	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	1	1257	25.0	-13	True	GATAAA	-14
PB.10143.11	chr6	-	3091	7	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	1	-1348	any annotated donor/acceptor	FALSE	canonical	1	2633	junction_3	155360.0862973928	NA	2	1	TRUE	NA	NA	NA	C	coding	346	1041	86	1126	25.0	-18	True	AATAAA	-18
PB.11659.4	chr9	+	2793	10	full-splice_match	PTPDC1	ENST00000375360.7	4517	10	19	1705	19	239	multi-exon	FALSE	canonical	1	23231	junction_1	15103.482061930677	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	322	2586	25.0	0	True	AATATA	-33
PB.10143.10	chr6	-	2581	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	450	1436	450	-1373	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	12	641	70.0	431	False	NA	NA
PB.11659.2	chr9	+	4556	10	novel_not_in_catalog	PTPDC1	novel	4517	10	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	681	junction_1	20237.774179202494	NA	2	NA	TRUE	NA	NA	NA	C	coding	754	2265	382	2646	20.0	-7174	False	AATAAA	-20
PB.11625.90	chr9	-	1880	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-9	49	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	231	1622	40.0	-27	True	NA	NA
PB.11659.1	chr9	+	4541	10	full-splice_match	PTPDC1	ENST00000375360.7	4517	10	-26	2	-26	0	multi-exon	FALSE	canonical	1	23231	junction_1	15103.482061930677	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	367	2631	20.0	-7194	False	AATAAA	-20
PB.3564.1	chr14	+	2721	13	novel_in_catalog	DLST	novel	563	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	11896	junction_1	132963.3218670086	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	499	1311	25.0	-3	True	ATTAAA	-15
PB.3564.3	chr14	+	2801	15	full-splice_match	DLST	ENST00000334220.8	2838	15	32	5	0	-5	multi-exon	FALSE	canonical	1	47795	junction_3	132569.62418963335	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	30	1391	25.0	0	True	ATTAAA	-15
PB.12221.5	chrX	-	5317	4	novel_in_catalog	AMMECR1	novel	5504	6	NA	NA	2	-14	intron_retention	FALSE	canonical	1	8375	junction_3	40628.728333532665	NA	4	NA	TRUE	NA	NA	NA	C	coding	268	807	12	818	90.0	1	True	NA	NA
PB.3564.4	chr14	+	2737	13	novel_in_catalog	DLST	novel	563	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	5568	junction_3	144103.91894441628	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	149	1327	25.0	0	True	ATTAAA	-15
PB.8284.19	chr3	-	4304	1	novel_in_catalog	CD47	novel	766	5	NA	NA	-31	-27296	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	149	514	80.0	1	True	NA	NA
PB.8284.18	chr3	-	2166	3	incomplete-splice_match	CD47	ENST00000361309.5	1285	11	-7	22449	4	-10073	3prime_fragment	FALSE	canonical	1	398552	junction_2	217402.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	114	641	90.0	7	True	NA	NA
PB.12130.3	chrX	+	6811	46	novel_in_catalog	MED12	novel	6977	45	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	1	32243	junction_41	65017.72792615493	NA	1	1	TRUE	NA	NA	NA	C	coding	2155	6468	115	6582	25.0	45	True	AATACA	-15
PB.12130.2	chrX	+	6900	46	novel_in_catalog	MED12	novel	6977	45	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	1	32243	junction_41	65493.87183220529	NA	0	NA	TRUE	NA	NA	NA	C	coding	2152	6459	213	6671	25.0	-4	True	AATACA	-15
PB.12130.1	chrX	+	6903	45	full-splice_match	MED12	ENST00000333646.10	6977	45	67	7	67	-1	multi-exon	FALSE	canonical	1	93763	junction_1	58757.658515069794	NA	2	1	TRUE	NA	NA	NA	C	coding	2180	6543	133	6675	25.0	27	True	AATACA	-14
PB.8284.11	chr3	-	1244	8	novel_in_catalog	CD47	novel	5225	9	NA	NA	-19	17	no_combination_of_known_junctions	FALSE	canonical	1	182986	junction_1	409495.2918988776	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	137	1018	15.0	13	True	AATAAA	-32
PB.9855.4	chr6	+	2128	5	novel_not_in_catalog	TUBB	novel	2670	4	NA	NA	151	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	2191069.4712269367	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	156	1022	40.0	0	True	AATAAA	-8
PB.8284.13	chr3	-	1261	9	full-splice_match	CD47	ENST00000355354.12	5225	9	-5	3969	-5	16	multi-exon	FALSE	canonical	1	398552	junction_8	287417.56413206446	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	123	1040	15.0	-2	True	AATAAA	-31
PB.12130.4	chrX	+	3826	26	novel_not_in_catalog	MED12	novel	6977	45	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_24	72606.10411434014	NA	1	1	TRUE	NA	NA	NA	C	coding	1224	3675	44	3718	25.0	-17	True	AATACA	-15
PB.486.1	chr1	+	1639	6	incomplete-splice_match	NEXN	ENST00000342754.5	2712	10	8685	671	244	0	intron_retention	FALSE	canonical	1	229775	junction_4	44056.552005802725	NA	0	NA	TRUE	NA	NA	NA	B	coding	388	1167	78	1244	90.0	0	True	TATAAA	-39
PB.486.2	chr1	+	2312	6	incomplete-splice_match	NEXN	ENST00000342754.5	2712	10	8686	-3	245	3	intron_retention	FALSE	canonical	1	229775	junction_4	44056.552005802725	NA	0	NA	TRUE	NA	NA	NA	B	coding	388	1167	77	1243	20.0	1	True	AATAAA	-23
PB.486.3	chr1	+	2554	6	incomplete-splice_match	NEXN	ENST00000342754.5	2712	10	8706	-265	265	265	intron_retention	FALSE	canonical	1	229775	junction_4	44056.552005802725	NA	3	NA	TRUE	NA	NA	NA	B	coding	388	1167	57	1223	35.0	-16	True	ATTAAA	-17
PB.10224.9	chr6	-	2640	16	novel_in_catalog	HBS1L	novel	7163	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	961	junction_15	145045.57694778408	NA	1	NA	TRUE	NA	NA	NA	C	coding	620	1863	132	1994	30.0	-4	True	AATAAA	-19
PB.11569.1	chr9	+	1730	1	genic	FGF7P6	novel	NA	NA	NA	NA	-8	-56373	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	C	coding	153	462	180	641	50.0	NA	False	NA	NA
PB.5443.4	chr18	+	3029	20	novel_in_catalog	DTNA	novel	6522	22	NA	NA	-11	-69	combination_of_known_junctions	FALSE	canonical	1	42325	junction_19	55432.84735820655	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	175	2226	80.0	-25	True	AAGAAA	-22
PB.5443.3	chr18	+	5902	20	novel_in_catalog	DTNA	novel	6522	22	NA	NA	-20	3	combination_of_known_junctions	FALSE	canonical	1	60382	junction_1	52945.77754672888	NA	3	NA	TRUE	NA	NA	NA	C	coding	683	2052	184	2235	15.0	-34	True	ATTAAA	-20
PB.5443.2	chr18	+	2536	15	full-splice_match	DTNA	ENST00000597599.5	1869	15	-34	-633	-21	0	multi-exon	FALSE	canonical	1	60382	junction_1	51951.841520316106	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	185	1717	85.0	-35	True	NA	NA
PB.6812.1	chr2	-	5260	16	full-splice_match	IFIH1	ENST00000263642.2	3595	16	20	-1685	1	1685	multi-exon	FALSE	canonical	1	173522	junction_8	51008.916272702314	NA	0	NA	TRUE	NA	NA	NA	C	coding	1002	3009	446	3454	45.0	-1	True	ATTAAA	-19
PB.926.3	chr1	-	2954	13	novel_in_catalog	SCYL3	novel	6364	13	NA	NA	50	-6	combination_of_known_junctions	FALSE	canonical	1	12044	junction_7	30250.668893775444	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	1317	2321	35.0	-7	True	AATAAA	-26
PB.5443.1	chr18	+	2894	15	full-splice_match	DTNA	ENST00000597599.5	1869	15	-35	-990	-22	357	multi-exon	FALSE	canonical	1	60382	junction_1	51951.841520316106	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	186	1718	35.0	-36	True	AATAAA	-17
PB.5701.8	chr19	-	2975	20	novel_not_in_catalog	TYK2	novel	3971	23	NA	NA	-6	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_19	170867.16756887003	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	441	2672	15.0	-10	True	AATAAA	-18
PB.5701.9	chr19	-	4604	24	novel_in_catalog	TYK2	novel	3971	23	NA	NA	-12	1	intron_retention	FALSE	canonical	1	302466	junction_17	123255.51381803658	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	365	3298	15.0	30	False	AATAAA	-17
PB.3516.10	chr14	-	1828	6	novel_in_catalog	AL049779.1	novel	670	5	NA	NA	-5398	-17529	no_combination_of_known_junctions	FALSE	canonical	1	2871	junction_5	669699.6563993744	NA	0	NA	TRUE	NA	NA	NA	B	coding	188	567	334	900	100.0	-7	True	NA	NA
PB.3516.12	chr14	-	1838	6	novel_in_catalog	AL049779.1	novel	670	5	NA	NA	-5395	-17530	no_combination_of_known_junctions	FALSE	canonical	1	1302	junction_3	629251.2991463427	NA	0	NA	TRUE	NA	NA	NA	B	coding	283	852	60	911	95.0	-4	True	NA	NA
PB.3516.13	chr14	-	1735	6	full-splice_match	RDH11	ENST00000428130.6	1064	6	-31	-640	0	-1	multi-exon	FALSE	canonical	1	14402	junction_2	598467.1930785847	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	62	808	95.0	-6	True	NA	NA
PB.3516.14	chr14	-	1763	7	full-splice_match	RDH11	ENST00000381346.8	2588	7	44	781	-4	-189	multi-exon	FALSE	canonical	1	794325	junction_6	358728.2901781499	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	68	1024	70.0	-12	True	NA	NA
PB.3516.15	chr14	-	4345	1	novel_in_catalog	RDH11	novel	2588	7	NA	NA	-10	1017	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	108	327	41	367	75.0	15	False	AGTAAA	-27
PB.3516.16	chr14	-	1784	2	full-splice_match	RDH11	ENST00000556692.1	801	2	34	-1017	-5	1017	multi-exon	FALSE	canonical	1	794325	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	57	359	75.0	-1	True	AGTAAA	-27
PB.5701.1	chr19	-	4205	25	full-splice_match	TYK2	ENST00000525621.5	4347	25	146	-4	-5	0	multi-exon	FALSE	canonical	1	302466	junction_18	125201.46109514606	NA	0	NA	TRUE	NA	NA	NA	C	coding	1180	3543	358	3900	15.0	-24	True	AATAAA	-20
PB.8539.14	chr3	+	4538	10	novel_in_catalog	TTC14	novel	2881	12	NA	NA	26	0	intron_retention	FALSE	canonical	1	2825	junction_1	93266.8247780144	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	336	1355	20.0	281	False	ATTAAA	-23
PB.7042.18	chr2	-	5771	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	288306	junction_10	40456.54936397814	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	53	880	25.0	-2	True	AATAAA	-17
PB.7042.19	chr2	-	4550	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	3470	junction_8	119152.95137074866	NA	4	NA	TRUE	NA	NA	NA	C	coding	263	792	438	1229	20.0	-1	True	AATAAA	-16
PB.7042.14	chr2	-	4438	12	novel_not_in_catalog	WDFY1	novel	361	2	NA	NA	1752	-2	any annotated donor/acceptor	FALSE	canonical	1	129	junction_11	113942.73819397397	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	82	1116	25.0	1775	False	AATAAA	-17
PB.8311.1	chr3	-	5385	1	full-splice_match	AC093010.3	ENST00000570269.2	15214	1	5160	4669	5160	-4669	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	5153	False	NA	NA
PB.7042.12	chr2	-	4478	10	novel_in_catalog	WDFY1	novel	361	2	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1789	junction_8	124483.028674694	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	52	1155	20.0	-1	True	AATAAA	-18
PB.5895.4	chr19	+	4044	5	novel_in_catalog	POP4	novel	3385	7	NA	NA	2	-1	intron_retention	FALSE	canonical	1	339913	junction_1	101520.3616827063	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2	True	AATAAA	-15
PB.6812.2	chr2	-	3945	17	novel_not_in_catalog	IFIH1	novel	3544	16	NA	NA	5	1680	any annotated donor/acceptor	FALSE	canonical	1	686	junction_1	79779.17073935637	NA	2	NA	TRUE	NA	NA	NA	C	coding	1051	3156	392	3547	45.0	-16	True	ATTAAA	-14
PB.7042.11	chr2	-	4556	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	4607	junction_9	117939.68385836041	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	310	1233	20.0	0	True	AATAAA	-18
PB.9689.7	chr6	+	2165	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	12	3154	-1	675	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	115	1470	40.0	-1	True	NA	NA
PB.3392.1	chr14	+	4182	4	full-splice_match	PAX9	ENST00000361487.6	4514	4	-19	351	-19	-351	multi-exon	FALSE	canonical	1	54263	junction_2	3553.838988411765	NA	3	1	TRUE	NA	NA	NA	A	coding	341	1026	245	1270	20.0	-1206	False	AATAAA	-15
PB.9689.5	chr6	+	3193	7	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	-1	-4981	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	163535.97954621146	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	115	894	20.0	-1	True	AATAAA	-27
PB.9689.4	chr6	+	6432	9	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	147724.08991257992	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	1745	2590	15.0	-1	True	AATAAA	-17
PB.9689.3	chr6	+	5208	8	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	10455	junction_5	145117.99597062595	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	116	1360	20.0	-2	True	AATAAA	-23
PB.9689.2	chr6	+	5199	9	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	-2	-8	any annotated donor/acceptor	TRUE	canonical	1	5246	junction_2	147971.35329214696	NA	4	NA	TRUE	NA	NA	NA	C	coding	306	921	438	1358	15.0	-2	True	AATAAA	-16
PB.8493.28	chr3	+	2118	15	full-splice_match	MFSD1	ENST00000484166.5	2121	15	5	-2	-1	0	multi-exon	FALSE	canonical	1	37503	junction_2	218830.022947828	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	399	1382	15.0	-81	True	ATTAAA	-17
PB.8493.29	chr3	+	3848	15	incomplete-splice_match	MFSD1	ENST00000622669.4	2361	16	151	3	-14	0	intron_retention	FALSE	canonical	1	235512	junction_9	170570.27082234513	NA	4	NA	TRUE	NA	NA	NA	C	coding	465	1398	77	1474	15.0	-60	True	ATTAAA	-14
PB.8493.26	chr3	+	4008	15	novel_in_catalog	MFSD1	novel	566	5	NA	NA	3	0	intron_retention	FALSE	canonical	1	235512	junction_9	171280.92597810875	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	100	1404	15.0	-83	True	ATTAAA	-14
PB.2802.6	chr12	-	2833	1	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	153984	1878	45752	-1878	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1298	False	ATTAAA	-14
PB.8493.24	chr3	+	1583	16	full-splice_match	MFSD1	ENST00000264266.12	1594	16	-33	44	1	-44	multi-exon	FALSE	canonical	1	235512	junction_9	166393.49259017178	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	96	1493	60.0	-79	True	TTTAAA	-22
PB.2802.4	chr12	-	8018	29	full-splice_match	EEA1	ENST00000322349.12	9875	29	-16	1873	-16	-1873	multi-exon	FALSE	canonical	1	51278	junction_28	48219.448505858956	NA	2	NA	TRUE	NA	NA	NA	C	coding	1411	4236	282	4517	25.0	-53	False	ATTAAA	-19
PB.8493.23	chr3	+	2211	16	full-splice_match	MFSD1	ENST00000622669.4	2361	16	149	1	-16	1	multi-exon	FALSE	canonical	1	235512	junction_9	166393.49259017178	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	79	1476	15.0	-62	True	ATTAAA	-16
PB.9689.9	chr6	+	3232	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	13	2086	0	1743	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	2	NA	TRUE	NA	NA	NA	C	coding	451	1356	114	1469	35.0	0	True	AATAAA	-25
PB.8539.11	chr3	+	4147	11	full-splice_match	TTC14	ENST00000470669.5	3150	11	-22	-975	0	0	multi-exon	FALSE	canonical	1	26710	junction_10	82051.34401269731	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	74	1393	20.0	-10	True	ATTAAA	-23
PB.1769.12	chr11	-	2511	6	full-splice_match	ZNF195	ENST00000526601.5	2008	6	8	-511	0	160	multi-exon	FALSE	canonical	1	38515	junction_2	92137.87052585922	NA	2	NA	TRUE	NA	NA	NA	C	coding	610	1833	167	1999	45.0	0	True	AATATA	-23
PB.1769.13	chr11	-	1816	4	full-splice_match	ZNF195	ENST00000354599.10	2970	4	-36	1190	0	0	multi-exon	FALSE	canonical	1	105449	junction_1	82141.35359786135	NA	1	1	TRUE	NA	NA	NA	C	coding	557	1674	142	1815	80.0	36	False	NA	NA
PB.1769.10	chr11	-	4964	9	novel_not_in_catalog	ZNF195	novel	881	4	NA	NA	6	200	intron_retention	FALSE	canonical	1	2490	junction_4	93994.89364288627	NA	5	1	TRUE	NA	NA	NA	C	coding	530	1593	2820	4412	30.0	-23	True	NA	NA
PB.1769.11	chr11	-	2557	6	novel_in_catalog	ZNF195	novel	881	4	NA	NA	-1	199	combination_of_known_junctions	FALSE	canonical	1	14224	junction_3	99084.22941195032	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	414	2006	30.0	-30	True	NA	NA
PB.1769.16	chr11	-	1905	6	full-splice_match	ZNF195	ENST00000438262.6	1018	6	-7	-880	0	0	multi-exon	FALSE	canonical	1	6149	junction_1	103780.29669913264	NA	13	3	TRUE	NA	NA	NA	C	coding	481	1446	459	1904	80.0	5	True	NA	NA
PB.8539.12	chr3	+	1390	11	incomplete-splice_match	TTC14	ENST00000296015.8	2881	12	63	2247	0	-1272	3prime_fragment	FALSE	canonical	1	136615	junction_10	54800.82017123466	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1320	70	1389	70.0	-6	True	AAGAAA	-29
PB.1769.14	chr11	-	2058	6	full-splice_match	ZNF195	ENST00000526601.5	2008	6	-50	0	-15	0	multi-exon	FALSE	canonical	1	38515	junction_2	92137.87052585922	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	225	2057	80.0	21	False	NA	NA
PB.1769.15	chr11	-	1973	5	full-splice_match	ZNF195	ENST00000005082.13	2021	5	-75	123	-10	0	multi-exon	FALSE	canonical	1	38515	junction_2	92120.64181550192	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	152	1972	80.0	26	False	NA	NA
PB.5895.1	chr19	+	2708	6	novel_in_catalog	POP4	novel	3385	7	NA	NA	2	4	intron_retention	FALSE	canonical	1	339913	junction_1	90899.20617387151	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	1842	2381	25.0	17	True	TTTAAA	-17
PB.6812.3	chr2	-	3798	16	full-splice_match	IFIH1	ENST00000263642.2	3595	16	5	-208	5	208	multi-exon	FALSE	canonical	1	173522	junction_8	51008.916272702314	NA	3	NA	TRUE	NA	NA	NA	C	coding	1025	3078	392	3469	25.0	-16	True	NA	NA
PB.8473.2	chr3	+	4507	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	493	-1	no_combination_of_known_junctions	FALSE	canonical	1	9598	junction_1	355863.80728614074	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	223	1095	25.0	-8789	False	AATAAA	-36
PB.10519.2	chr7	+	4056	22	novel_not_in_catalog	AEBP1	novel	4081	21	NA	NA	-28	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	243837.55190143178	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	1219	3756	20.0	-23	True	AATAAA	-16
PB.10519.1	chr7	+	3569	21	full-splice_match	AEBP1	ENST00000223357.7	4081	21	515	-3	82	1	multi-exon	FALSE	canonical	1	371366	junction_2	192715.54633767222	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	730	3267	20.0	-9115	False	AATAAA	-18
PB.1570.1	chr10	+	1719	4	full-splice_match	PGAM1	ENST00000334828.5	1830	4	113	-2	-20	2	multi-exon	FALSE	canonical	1	764	junction_2	150.8516563456372	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	36	800	20.0	-1549	False	AATAAA	-19
PB.1570.2	chr10	+	1700	4	novel_not_in_catalog	PGAM1	novel	1830	4	NA	NA	61	-4	any annotated donor/acceptor	FALSE	canonical	1	37	junction_1	406.90894422326096	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	251	787	20.0	-3	True	AATAAA	-13
PB.1570.3	chr10	+	1434	4	full-splice_match	PGAM1	ENST00000334828.5	1830	4	64	332	64	-332	multi-exon	FALSE	canonical	1	764	junction_2	150.8516563456372	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	85	849	50.0	0	True	ATTAAA	-18
PB.103.12	chr1	+	3734	9	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	15	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	185343.78056124347	NA	22	1	TRUE	NA	NA	NA	C	coding	266	801	735	1535	15.0	-7054	False	AATAAA	-13
PB.11671.7	chr9	+	3513	16	novel_in_catalog	TDRD7	novel	3834	17	NA	NA	204	-5	no_combination_of_known_junctions	FALSE	canonical	1	5595	junction_8	54469.56585225674	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	92	1735	35.0	58	True	AATAAA	-15
PB.6812.4	chr2	-	3454	15	novel_in_catalog	IFIH1	novel	3544	16	NA	NA	7	13	no_combination_of_known_junctions	FALSE	canonical	1	3768	junction_13	82639.86095050238	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	390	3320	50.0	-14	True	AATAAA	-33
PB.103.10	chr1	+	3749	11	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	-10	-10	any annotated donor/acceptor	FALSE	canonical	1	3108	junction_10	169794.66971327458	NA	2	NA	TRUE	NA	NA	NA	C	coding	483	1452	100	1551	15.0	2	True	AATAAA	-12
PB.2719.8	chr12	+	6048	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-28	-408	-2	-5	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	0	NA	TRUE	NA	NA	NA	C	coding	1711	5136	389	5524	40.0	-6	True	AATAAA	-16
PB.2719.9	chr12	+	6643	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-26	-1005	0	592	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	0	NA	TRUE	NA	NA	NA	C	coding	1711	5136	387	5522	55.0	-4	True	TATAAA	-16
PB.2424.1	chr12	-	1454	9	full-splice_match	MLF2	ENST00000203630.9	1969	9	420	95	-18	-87	multi-exon	FALSE	canonical	1	2108045	junction_8	397689.7950538837	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	226	972	40.0	5	True	NA	NA
PB.103.11	chr1	+	2277	9	novel_not_in_catalog	TNFRSF1B	novel	557	5	NA	NA	-10	-1319	any annotated donor/acceptor	FALSE	canonical	1	9129	junction_1	183402.219461037	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	585	1388	75.0	2	True	NA	NA
PB.2719.1	chr12	+	7499	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-53	-1834	-22	1421	multi-exon	TRUE	canonical	1	96698	junction_27	43514.15955130447	NA	1	NA	TRUE	NA	NA	NA	C	coding	1711	5136	414	5549	40.0	-31	False	AATAAA	-40
PB.2719.2	chr12	+	7060	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-49	-1399	-18	986	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	5	NA	TRUE	NA	NA	NA	C	coding	1711	5136	410	5545	35.0	-27	False	TATAAA	-44
PB.2719.3	chr12	+	6078	34	novel_not_in_catalog	MON2	novel	10382	36	NA	NA	-16	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_27	51487.68507521037	NA	4	1	TRUE	NA	NA	NA	C	coding	1407	4224	408	4631	45.0	-25	False	AATAAA	-17
PB.2719.4	chr12	+	6947	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-41	-1294	-10	881	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	1	NA	TRUE	NA	NA	NA	C	coding	1711	5136	402	5537	25.0	-19	True	AAGAAA	-3
PB.2719.5	chr12	+	6949	34	novel_not_in_catalog	MON2	novel	10382	36	NA	NA	-2	881	any annotated donor/acceptor	FALSE	canonical	0	0	junction_27	51487.68507521037	NA	5	1	TRUE	NA	NA	NA	C	coding	1407	4224	394	4617	25.0	-11	True	AAGAAA	-3
PB.2719.6	chr12	+	7489	34	novel_not_in_catalog	MON2	novel	10382	36	NA	NA	-2	1421	any annotated donor/acceptor	FALSE	canonical	0	0	junction_27	51487.68507521037	NA	15	2	TRUE	NA	NA	NA	C	coding	1407	4224	394	4617	40.0	-11	True	AATAAA	-40
PB.2719.7	chr12	+	6277	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-28	-637	-2	224	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	0	NA	TRUE	NA	NA	NA	C	coding	1711	5136	389	5524	30.0	-6	True	ATTAAA	-36
PB.7531.2	chr21	-	6389	23	novel_not_in_catalog	PRDM15	novel	2283	7	NA	NA	127	0	intron_retention	TRUE	canonical	1	7018	junction_10	22238.165062177337	NA	2	NA	TRUE	NA	NA	NA	C	coding	1097	3294	83	3376	10.0	-13	True	AATAAA	-23
PB.7043.38	chr2	-	2042	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-110	any annotated donor/acceptor	FALSE	canonical	1	2308	junction_2	730702.8611453158	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	211	1392	15.0	-1	True	AATAAA	-28
PB.7531.6	chr21	-	5604	24	novel_not_in_catalog	PRDM15	novel	2283	7	NA	NA	153	-896	intron_retention	FALSE	non_canonical	0	0	junction_1	20338.69244365478	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	61	3024	40.0	13	True	AATAAA	-16
PB.7531.4	chr21	-	6528	24	full-splice_match	PRDM15	ENST00000398548.5	6654	24	122	4	122	-2	multi-exon	FALSE	canonical	1	16677	junction_23	18476.042764569076	NA	0	NA	TRUE	NA	NA	NA	C	coding	1141	3426	92	3517	10.0	-18	True	AATAAA	-21
PB.6812.5	chr2	-	3583	16	full-splice_match	IFIH1	ENST00000263642.2	3595	16	10	2	-9	-2	multi-exon	FALSE	canonical	1	173522	junction_8	51008.916272702314	NA	2	NA	TRUE	NA	NA	NA	C	coding	1025	3078	387	3464	35.0	-11	True	AATAAA	-18
PB.3517.1	chr14	-	9690	42	full-splice_match	ZFYVE26	ENST00000347230.8	9675	42	-15	0	-14	0	multi-exon	TRUE	canonical	1	20497	junction_17	26895.688644526206	NA	0	NA	TRUE	NA	NA	NA	C	coding	2539	7620	155	7774	15.0	-20	True	AATAAA	-18
PB.5345.2	chr17	-	3344	9	full-splice_match	OGFOD3	ENST00000313056.9	4287	9	49	894	0	-1	multi-exon	FALSE	canonical	1	111295	junction_8	79849.97519009869	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	104	1063	25.0	-3	True	AGTAAA	-18
PB.5345.3	chr17	-	2839	10	novel_not_in_catalog	OGFOD3	novel	4287	9	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	112280.40190303102	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	102	1061	20.0	-1	True	AGTAAA	-16
PB.5345.1	chr17	-	3555	10	full-splice_match	OGFOD3	ENST00000329197.9	1652	10	-10	-1893	2	-1	multi-exon	FALSE	canonical	1	111295	junction_9	95684.1702442642	NA	18	1	TRUE	NA	NA	NA	C	coding	331	996	102	1097	25.0	-1	True	AGTAAA	-18
PB.5345.6	chr17	-	1469	10	full-splice_match	OGFOD3	ENST00000329197.9	1652	10	-31	214	-6	2	multi-exon	FALSE	canonical	1	111295	junction_9	95684.1702442642	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	123	1118	20.0	-22	False	AGTAAA	-15
PB.5345.7	chr17	-	2569	8	incomplete-splice_match	OGFOD3	ENST00000329197.9	1652	10	-5	4536	-5	-1	3prime_fragment	FALSE	canonical	1	111295	junction_7	80687.9043376897	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	97	1047	20.0	4	True	ATTAAA	-17
PB.5345.4	chr17	-	2130	9	full-splice_match	OGFOD3	ENST00000313056.9	4287	9	50	2107	1	337	multi-exon	FALSE	canonical	1	111295	junction_8	79849.97519009869	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	103	1062	30.0	-2	True	NA	NA
PB.5345.5	chr17	-	1968	9	full-splice_match	OGFOD3	ENST00000313056.9	4287	9	41	2278	5	166	multi-exon	FALSE	canonical	1	111295	junction_8	79849.97519009869	NA	2	NA	TRUE	NA	NA	NA	C	coding	319	960	112	1071	75.0	-11	True	NA	NA
PB.723.7	chr1	+	4793	11	full-splice_match	RPRD2	ENST00000369068.4	4612	11	-21	-160	-18	160	multi-exon	FALSE	canonical	1	143066	junction_4	42567.68338822304	NA	2	NA	TRUE	NA	NA	NA	C	coding	1461	4386	26	4411	20.0	8	True	AATAAA	-25
PB.3187.1	chr13	+	2660	1	antisense	novelGene_PCDH9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11526.17	chr9	-	8321	58	novel_not_in_catalog	TLN1	novel	8823	57	NA	NA	-21	-391	any annotated donor/acceptor	TRUE	canonical	1	7077	junction_57	507978.6094434758	NA	2	NA	TRUE	NA	NA	NA	C	coding	2541	7626	244	7869	20.0	63	True	AATAAA	-16
PB.11526.15	chr9	-	8206	57	full-splice_match	TLN1	ENST00000314888.9	8823	57	226	391	-65	-391	multi-exon	FALSE	canonical	1	426708	junction_56	451540.13772779313	NA	0	NA	TRUE	NA	NA	NA	C	coding	2541	7626	129	7754	20.0	19	True	AATAAA	-16
PB.9736.1	chr6	+	2639	2	full-splice_match	SMIM13	ENST00000416247.3	4688	2	136	1913	-62	1009	multi-exon	FALSE	canonical	1	117526	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	931	1527	60.0	-17	True	NA	NA
PB.3342.9	chr14	-	2143	7	full-splice_match	PSME2	ENST00000558931.5	2754	7	651	-40	-2	0	multi-exon	FALSE	canonical	1	476633	junction_2	432266.5988371322	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	1	True	AATAAA	-19
PB.3342.8	chr14	-	2543	5	novel_in_catalog	PSME2	novel	496	2	NA	NA	-4	0	intron_retention	FALSE	canonical	1	497935	junction_1	477303.6370789039	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-1	True	AATAAA	-19
PB.3342.7	chr14	-	1825	9	novel_in_catalog	PSME2	novel	496	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	377781	junction_5	428138.3479107542	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-11	True	AATAAA	-20
PB.1664.1	chr10	-	6752	16	novel_in_catalog	ABLIM1	novel	6841	18	NA	NA	7	10	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	127768.27241168548	NA	5	1	TRUE	NA	NA	NA	B	coding	349	1050	307	1356	15.0	-2	True	AATAAA	-29
PB.1664.2	chr10	-	6751	16	novel_in_catalog	ABLIM1	novel	6841	18	NA	NA	4	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	149043.01365286764	NA	6	2	TRUE	NA	NA	NA	B	coding	351	1056	310	1365	20.0	-5	True	AATAAA	-19
PB.1664.3	chr10	-	6063	16	novel_in_catalog	ABLIM1	novel	6841	18	NA	NA	35	-651	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	127768.27241168548	NA	5	1	TRUE	NA	NA	NA	B	coding	349	1050	279	1328	20.0	-6	True	ATTAAA	-30
PB.1664.4	chr10	-	2426	16	novel_in_catalog	ABLIM1	novel	6841	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	127768.27241168548	NA	1	1	TRUE	NA	NA	NA	B	coding	349	1050	339	1388	75.0	-34	False	NA	NA
PB.3342.2	chr14	-	2955	2	novel_in_catalog	PSME2	novel	496	2	NA	NA	-8	0	intron_retention	FALSE	canonical	1	1688103	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-5	True	AATAAA	-20
PB.3342.1	chr14	-	1447	11	full-splice_match	PSME2	ENST00000216802.9	1404	11	-45	2	-8	0	multi-exon	FALSE	canonical	1	377781	junction_6	425708.62914632115	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	686	1405	5.0	29	True	AATAAA	-19
PB.2452.8	chr12	+	2140	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	92	4	-45	-4	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	363	1523	30.0	-4	True	AATAAA	-15
PB.2452.9	chr12	+	5363	9	novel_not_in_catalog	RIMKLB	novel	570	2	NA	NA	-43	0	any annotated donor/acceptor	FALSE	canonical	1	8404	junction_6	60862.54804886171	NA	3	NA	TRUE	NA	NA	NA	C	coding	386	1161	361	1521	40.0	-2	True	AATAAA	-16
PB.2452.4	chr12	+	8674	7	novel_in_catalog	RIMKLB	novel	570	2	NA	NA	48	0	intron_retention	FALSE	canonical	1	51546	junction_2	55821.45917914444	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	385	1545	40.0	-26	True	AATAAA	-16
PB.2452.5	chr12	+	4742	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	77	-2583	55	-202	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	378	1538	5.0	-19	True	GGGGCT	-39
PB.2452.6	chr12	+	4947	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	81	-2792	-56	6	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	374	1534	5.0	-15	True	AATATA	-27
PB.2452.7	chr12	+	2573	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	82	-419	-55	419	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	373	1533	30.0	-14	True	TATAAA	-15
PB.2452.1	chr12	+	3459	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	91	-1314	-46	1314	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	364	1524	30.0	-5	True	AATAAA	-35
PB.2452.2	chr12	+	2095	10	novel_not_in_catalog	RIMKLB	novel	570	2	NA	NA	43	0	any annotated donor/acceptor	FALSE	canonical	1	4064	junction_6	61906.881299035245	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	390	1253	40.0	-31	True	AATAAA	-16
PB.2452.3	chr12	+	3381	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	71	-1216	49	1216	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	384	1544	30.0	-25	True	AATAAA	-22
PB.11518.12	chr9	-	2402	11	novel_in_catalog	PIGO	novel	2588	13	NA	NA	2	-4	no_combination_of_known_junctions	FALSE	canonical	1	1414	junction_4	91655.14293895352	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	41	1552	30.0	-9	True	AATAAA	-7
PB.8226.1	chr3	-	2112	1	antisense	novelGene_SAMMSON_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	AATAAA	-42
PB.7916.15	chr3	+	1575	4	incomplete-splice_match	SETD5	ENST00000431285.5	1824	10	40	9867	40	-1045	3prime_fragment	FALSE	canonical	1	139805	junction_1	24458.036202624466	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	2	340	20.0	-247	False	AATAAA	-17
PB.3197.2	chr13	+	3130	7	novel_in_catalog	UCHL3	novel	1050	8	NA	NA	-19	7	intron_retention	FALSE	canonical	1	441219	junction_1	185283.3104720234	NA	2	NA	TRUE	NA	NA	NA	B	coding	113	342	271	612	20.0	-19	True	ATTAAA	-24
PB.3197.1	chr13	+	3034	7	novel_not_in_catalog	UCHL3	novel	1050	8	NA	NA	-38	5	intron_retention	FALSE	non_canonical	0	0	junction_1	312778.20400387375	NA	0	NA	TRUE	NA	NA	NA	B	coding	149	450	69	518	15.0	-38	True	ATTAAA	-22
PB.11221.12	chr8	+	2929	17	full-splice_match	CPNE3	ENST00000517490.5	4865	17	11	1925	0	-1838	multi-exon	FALSE	canonical	1	315722	junction_2	88733.99168756352	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	153	1766	80.0	0	True	TATAAA	-17
PB.8300.1	chr3	+	2127	6	full-splice_match	GTPBP8	ENST00000383678.6	1360	6	-5	-762	-5	169	multi-exon	FALSE	canonical	1	130099	junction_2	33278.31594897795	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	88	942	55.0	0	True	CATAAA	-10
PB.7283.2	chr20	+	1849	16	full-splice_match	CTNNBL1	ENST00000361383.10	1925	16	64	12	8	0	multi-exon	FALSE	canonical	1	303513	junction_8	143243.46884511775	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	54	1745	10.0	7	True	ATTAAA	-13
PB.7283.1	chr20	+	1994	17	novel_not_in_catalog	CTNNBL1	novel	1990	17	NA	NA	9	4	any annotated donor/acceptor	FALSE	canonical	1	1338	junction_2	210150.7890751361	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	330	1886	10.0	-22	True	ATTAAA	-17
PB.10224.1	chr6	-	3096	18	full-splice_match	HBS1L	ENST00000367837.9	7163	18	80	3987	1	264	multi-exon	FALSE	canonical	1	307314	junction_15	91043.00295143622	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	128	2182	30.0	0	True	NA	NA
PB.3459.8	chr14	+	2584	7	full-splice_match	TMEM260	ENST00000557657.5	2572	7	-27	15	5	-15	multi-exon	FALSE	canonical	1	51691	junction_1	12127.749594307355	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	118	978	75.0	0	True	NA	NA
PB.3459.9	chr14	+	2183	1	novel_in_catalog	TMEM260	novel	662	4	NA	NA	7	-3920	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	117	354	116	469	25.0	2	True	AATAAA	-20
PB.6353.4	chr2	-	3678	22	novel_not_in_catalog	ADCY3	novel	5050	21	NA	NA	-9155	0	any annotated donor/acceptor	TRUE	canonical	1	22683	junction_21	113002.60563604339	NA	0	NA	TRUE	NA	NA	NA	B	coding	867	2604	139	2742	35.0	-2	True	ATTAAA	-17
PB.6353.5	chr2	-	3676	22	novel_not_in_catalog	ADCY3	novel	5050	21	NA	NA	-9155	0	any annotated donor/acceptor	FALSE	canonical	1	10803	junction_15	119046.91602226702	NA	0	NA	TRUE	NA	NA	NA	B	coding	925	2778	139	2916	35.0	-2	True	ATTAAA	-17
PB.7302.3	chr20	+	2483	9	full-splice_match	TOX2	ENST00000341197.8	1880	9	-9	-594	-9	-1	multi-exon	FALSE	canonical	1	33615	junction_1	31396.218955273896	NA	22	NA	TRUE	NA	NA	NA	C	coding	506	1521	38	1558	30.0	3	True	AATAAA	-15
PB.7302.2	chr20	+	2042	7	novel_in_catalog	TOX2	novel	1880	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	1	24544	junction_5	39445.233153773544	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	73	1116	30.0	-32	True	AATAAA	-16
PB.7302.1	chr20	+	2481	10	novel_not_in_catalog	TOX2	novel	1880	9	NA	NA	-55	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	42132.17577787524	NA	17	1	TRUE	NA	NA	NA	C	coding	464	1395	162	1556	30.0	-43	True	AATAAA	-15
PB.6353.1	chr2	-	4225	20	novel_not_in_catalog	ADCY3	novel	5050	21	NA	NA	-9161	0	intron_retention	FALSE	canonical	1	22683	junction_19	87980.96615062705	NA	0	NA	TRUE	NA	NA	NA	B	coding	895	2688	145	2832	35.0	-8	True	ATTAAA	-17
PB.3459.1	chr14	+	2833	16	full-splice_match	TMEM260	ENST00000261556.10	4264	16	-3	1434	-3	-13	multi-exon	FALSE	canonical	1	51230	junction_10	19510.049292494255	NA	2	NA	TRUE	NA	NA	NA	C	coding	707	2124	126	2249	75.0	-8	True	AAAAAG	-40
PB.3459.2	chr14	+	3995	17	novel_not_in_catalog	TMEM260	novel	662	4	NA	NA	-4	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	26658.048774889263	NA	3	NA	TRUE	NA	NA	NA	C	coding	707	2124	127	2250	25.0	-9	True	AATAAA	-19
PB.3459.3	chr14	+	2425	1	novel_in_catalog	TMEM260	novel	662	4	NA	NA	-4	-3689	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	117	354	127	480	30.0	-9	True	AATAAA	-23
PB.3459.4	chr14	+	4265	16	full-splice_match	TMEM260	ENST00000261556.10	4264	16	-3	2	-3	-2	multi-exon	FALSE	canonical	1	51230	junction_10	19510.049292494255	NA	2	NA	TRUE	NA	NA	NA	C	coding	707	2124	126	2249	20.0	-8	True	AATAAA	-20
PB.3459.5	chr14	+	2792	8	novel_in_catalog	TMEM260	novel	662	4	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	1	4113	junction_4	33571.25580441867	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	794	1186	75.0	-5	True	NA	NA
PB.3459.6	chr14	+	2669	16	full-splice_match	TMEM260	ENST00000261556.10	4264	16	2	1593	2	0	multi-exon	FALSE	canonical	1	51230	junction_10	19510.049292494255	NA	2	NA	TRUE	NA	NA	NA	C	coding	707	2124	121	2244	65.0	-3	True	NA	NA
PB.3459.7	chr14	+	4084	15	novel_in_catalog	TMEM260	novel	662	4	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	21537	junction_10	23997.228831084405	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	118	1347	25.0	0	True	AATAAA	-19
PB.6802.27	chr2	-	6863	35	novel_not_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-27	-31515	any annotated donor/acceptor	FALSE	canonical	1	124	junction_18	43224.68303662598	NA	1	NA	TRUE	NA	NA	NA	B	coding	1709	5130	56	5185	45.0	18	True	AATAAA	-19
PB.6802.25	chr2	-	6937	35	novel_not_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-35	-31515	any annotated donor/acceptor	FALSE	canonical	1	123	junction_9	43211.15730595193	NA	12	NA	TRUE	NA	NA	NA	B	coding	1731	5196	64	5259	45.0	10	True	AATAAA	-19
PB.10771.5	chr7	+	4418	15	full-splice_match	RINT1	ENST00000257700.6	2976	15	95	-1537	-1	1537	multi-exon	FALSE	canonical	1	138273	junction_3	44325.714495432694	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	137	2515	35.0	-21	True	AATAAA	-18
PB.4430.10	chr16	+	3310	21	incomplete-splice_match	RBL2	ENST00000262133.10	4906	22	36	9854	36	1040	3prime_fragment	FALSE	canonical	1	257083	junction_1	158381.26453159636	NA	1	NA	TRUE	NA	NA	NA	C	coding	1069	3207	102	3308	40.0	-26	True	CATAAA	-24
PB.4430.11	chr16	+	4731	21	novel_in_catalog	RBL2	novel	838	6	NA	NA	42	-1	no_combination_of_known_junctions	FALSE	canonical	1	894	junction_1	182900.26483438315	NA	0	NA	TRUE	NA	NA	NA	C	coding	1002	3009	376	3384	15.0	-20	True	AATAAA	-14
PB.4430.12	chr16	+	2889	19	incomplete-splice_match	RBL2	ENST00000262133.10	4906	22	43	11744	43	-850	3prime_fragment	FALSE	canonical	1	257083	junction_1	117509.51284634705	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2793	95	2887	75.0	-19	True	NA	NA
PB.4430.13	chr16	+	4642	22	novel_in_catalog	RBL2	novel	838	6	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	10400	junction_1	177997.13297824824	NA	1	NA	TRUE	NA	NA	NA	C	coding	1065	3198	98	3295	15.0	-23	True	AATAAA	-14
PB.10353.29	chr7	+	5640	19	novel_in_catalog	SUN1	novel	520	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	59823	junction_1	178985.529667438	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1383	2687	4069	40.0	1	True	AATAAA	-22
PB.4430.15	chr16	+	3422	13	incomplete-splice_match	RBL2	ENST00000379935.8	4467	21	15958	2	-30	-2	5prime_fragment	FALSE	canonical	1	310185	junction_2	162296.01431634798	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	52	2076	15.0	-8629	False	AATAAA	-13
PB.10353.25	chr7	+	4280	22	novel_in_catalog	SUN1	novel	520	4	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	1	59823	junction_1	181699.12857077408	NA	20	3	TRUE	NA	NA	NA	B	coding	866	2601	103	2703	35.0	2	True	AATAAA	-28
PB.3402.4	chr14	-	2274	5	novel_in_catalog	KLHL28	novel	6545	5	NA	NA	9	-17	combination_of_known_junctions	FALSE	canonical	1	10141	junction_4	32429.530839961284	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	385	2076	85.0	-10	True	AGTAAA	-10
PB.10353.27	chr7	+	2727	6	novel_in_catalog	SUN1	novel	520	4	NA	NA	0	1666	combination_of_known_junctions	FALSE	canonical	1	272684	junction_1	113128.37596041057	NA	5	NA	TRUE	NA	NA	NA	B	coding	257	774	52	825	65.0	0	True	NA	NA
PB.10353.26	chr7	+	3775	17	novel_in_catalog	SUN1	novel	520	4	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2730	junction_4	265051.54619342886	NA	0	NA	TRUE	NA	NA	NA	B	coding	699	2100	105	2204	40.0	0	True	AATAAA	-22
PB.10353.21	chr7	+	4255	22	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	15529	junction_7	230655.3630824829	NA	0	NA	TRUE	NA	NA	NA	B	coding	876	2631	53	2683	40.0	-1	True	AATAAA	-23
PB.10353.20	chr7	+	4412	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	59823	junction_1	180777.96152890843	NA	0	NA	TRUE	NA	NA	NA	B	coding	424	1275	1574	2848	50.0	-1	True	AATAAA	-15
PB.10353.23	chr7	+	5598	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	-1	1	intron_retention	FALSE	canonical	1	272684	junction_1	151577.42233079273	NA	1	NA	TRUE	NA	NA	NA	B	coding	460	1383	2644	4026	40.0	-1	True	AATAAA	-23
PB.3402.5	chr14	-	2007	5	full-splice_match	KLHL28	ENST00000396128.8	6545	5	27	4511	27	-17	multi-exon	FALSE	canonical	1	71412	junction_2	16539.653629610868	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	94	1809	85.0	8	True	AGTAAA	-10
PB.2246.15	chr11	+	3995	9	full-splice_match	BIRC2	ENST00000613397.4	4066	9	71	0	71	0	multi-exon	FALSE	canonical	1	13187	junction_1	198174.90116336473	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	1773	3515	45.0	0	True	AATAAA	-8
PB.2246.14	chr11	+	2153	10	novel_in_catalog	BIRC2	novel	709	3	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	3970	junction_2	200031.89415419128	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	357	1673	45.0	23	True	AATAAA	-8
PB.2246.11	chr11	+	3645	10	novel_not_in_catalog	BIRC2	novel	709	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	2137	junction_7	200521.6236255634	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	1514	2893	45.0	21	True	AATAAA	-8
PB.2246.10	chr11	+	2398	10	novel_not_in_catalog	BIRC2	novel	709	3	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	201093.15155757547	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	602	1918	45.0	12	True	AATAAA	-8
PB.2246.13	chr11	+	3551	9	novel_not_in_catalog	BIRC2	novel	709	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	6550	junction_6	211434.18178226883	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	1512	3071	45.0	23	True	AATAAA	-8
PB.2246.12	chr11	+	4975	8	novel_in_catalog	BIRC2	novel	709	3	NA	NA	1	12	intron_retention	FALSE	canonical	1	487064	junction_5	69526.28778779304	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	2734	4476	20.0	22	True	AATAAA	-27
PB.8946.2	chr4	+	2180	13	novel_in_catalog	LARP7	novel	2286	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	70307	junction_7	176102.69254493638	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	135	1922	25.0	-9968	False	AATAAA	-16
PB.7785.4	chr22	-	3021	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	0	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	187097.0013976707	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	27	692	90.0	-1	True	NA	NA
PB.1971.10	chr11	-	4218	27	novel_not_in_catalog	DDB1	novel	4506	27	NA	NA	-4	-9	any annotated donor/acceptor	FALSE	canonical	1	227	junction_26	492733.469114507	NA	1	NA	TRUE	NA	NA	NA	C	coding	1084	3255	288	3542	45.0	27	True	AATAAA	-10
PB.7293.2	chr20	+	3276	21	novel_in_catalog	DHX35	novel	3287	21	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	1	9586	junction_16	32246.999973485905	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	64	2097	10.0	-55	False	AGTAAA	-35
PB.1971.12	chr11	-	3876	25	novel_in_catalog	DDB1	novel	4506	27	NA	NA	-18	-9	combination_of_known_junctions	FALSE	canonical	1	7705	junction_23	490857.252314276	NA	0	NA	TRUE	NA	NA	NA	C	coding	1027	3084	117	3200	45.0	13	True	AATAAA	-10
PB.7293.4	chr20	+	3310	22	full-splice_match	DHX35	ENST00000252011.7	3325	22	15	0	6	0	multi-exon	FALSE	canonical	1	62674	junction_17	25853.59047482398	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	19	2130	5.0	-10	True	AGTAAA	-36
PB.1971.14	chr11	-	3269	20	novel_not_in_catalog	DDB1	novel	4506	27	NA	NA	-60	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	527675.0229595774	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	159	2210	45.0	-29	True	AATAAA	-10
PB.7293.6	chr20	+	3214	21	full-splice_match	DHX35	ENST00000373323.8	2347	21	6	-873	6	-1	multi-exon	FALSE	canonical	1	4530	junction_2	34064.43861019142	NA	4	NA	TRUE	NA	NA	NA	C	coding	672	2019	19	2037	10.0	-10	True	AGTAAA	-33
PB.7293.7	chr20	+	3376	23	novel_not_in_catalog	DHX35	novel	3287	21	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	346	junction_12	39550.28278343911	NA	3	1	TRUE	NA	NA	NA	C	coding	361	1086	9	1094	10.0	0	True	AGTAAA	-32
PB.4084.3	chr15	+	3172	20	novel_not_in_catalog	UNC45A	novel	4002	23	NA	NA	9	-1	any annotated donor/acceptor	FALSE	canonical	1	14329	junction_9	193014.24377523907	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	1276	2796	5.0	9	True	AATAAA	-16
PB.4084.2	chr15	+	3204	20	incomplete-splice_match	UNC45A	ENST00000394275.6	4002	23	5107	1	2	-1	5prime_fragment	FALSE	canonical	1	174337	junction_1	149473.85597226972	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	39	2828	5.0	2	True	AATAAA	-16
PB.4084.1	chr15	+	3262	20	full-splice_match	UNC45A	ENST00000418476.2	3252	20	-10	0	-10	0	multi-exon	TRUE	canonical	1	132653	junction_1	155067.80099070916	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	51	2885	0.0	-10	True	AATAAA	-17
PB.6428.3	chr2	-	4520	6	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	2207138	junction_5	383765.1847760033	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	105	503	45.0	0	True	AATAAA	-14
PB.7334.1	chr20	-	3981	22	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-9	-19	combination_of_known_junctions	FALSE	canonical	1	109652	junction_7	87853.35033125545	NA	0	NA	TRUE	NA	NA	NA	C	coding	1206	3621	60	3680	90.0	0	True	NA	NA
PB.7334.2	chr20	-	4064	23	full-splice_match	ZMYND8	ENST00000471951.6	4053	23	-31	20	-8	-19	multi-exon	FALSE	canonical	1	109652	junction_8	82153.59633411125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1234	3705	59	3763	90.0	1	True	NA	NA
PB.7334.3	chr20	-	3998	23	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-17	-19	combination_of_known_junctions	FALSE	canonical	1	109652	junction_8	85667.31238010069	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	68	3697	90.0	4120	False	NA	NA
PB.7334.4	chr20	-	3928	23	full-splice_match	ZMYND8	ENST00000461685.5	3567	23	-60	-301	-10	-19	multi-exon	FALSE	canonical	1	155815	junction_22	74571.34170436283	NA	0	NA	TRUE	NA	NA	NA	C	coding	1188	3567	61	3627	90.0	-1	True	NA	NA
PB.7334.5	chr20	-	3906	22	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-9	-19	combination_of_known_junctions	FALSE	canonical	1	109652	junction_7	91250.70269499882	NA	0	NA	TRUE	NA	NA	NA	C	coding	1181	3546	60	3605	90.0	0	True	NA	NA
PB.7334.6	chr20	-	3844	22	full-splice_match	ZMYND8	ENST00000352431.6	3832	22	-31	19	-10	-19	multi-exon	FALSE	canonical	1	152684	junction_1	80573.43514424162	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	61	3543	90.0	-1	True	NA	NA
PB.7334.7	chr20	-	3830	23	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-1	-19	combination_of_known_junctions	FALSE	canonical	1	122743	junction_20	78550.95740657569	NA	0	NA	TRUE	NA	NA	NA	C	coding	1163	3492	38	3529	90.0	-9	True	NA	NA
PB.7334.8	chr20	-	3772	21	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-9	-19	no_combination_of_known_junctions	FALSE	canonical	1	4070	junction_20	99676.27307683358	NA	0	NA	TRUE	NA	NA	NA	C	coding	1072	3219	253	3471	90.0	0	True	NA	NA
PB.7334.9	chr20	-	3700	21	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-8	-19	no_combination_of_known_junctions	FALSE	canonical	1	8150	junction_1	101783.29765953745	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	59	3502	90.0	1	True	NA	NA
PB.6428.9	chr2	-	2006	7	full-splice_match	SRSF7	ENST00000446327.6	2453	7	134	313	-2	-311	multi-exon	FALSE	canonical	1	381799	junction_1	981245.881937077	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	105	785	65.0	0	True	NA	NA
PB.6428.8	chr2	-	2043	8	full-splice_match	SRSF7	ENST00000313117.10	2489	8	133	313	2	-311	multi-exon	FALSE	canonical	1	2207138	junction_7	326225.6787759301	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	106	822	65.0	-1	True	NA	NA
PB.12.8	chr1	-	1789	7	full-splice_match	SDF4	ENST00000360001.10	1956	7	1	166	1	-140	multi-exon	FALSE	canonical	1	1038815	junction_6	519017.0984469908	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	284	1351	40.0	0	True	ATTAAA	-21
PB.11028.1	chr8	-	2215	1	antisense	novelGene_AC055854.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	124	375	643	1017	15.0	6176	False	NA	NA
PB.8957.1	chr4	+	1871	6	novel_not_in_catalog	AC093752.1	novel	605	3	NA	NA	-35	-12495	any annotated donor/acceptor	FALSE	canonical	1	7426	junction_5	38412.76666422246	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-4705	False	AATAAA	-29
PB.73.5	chr1	+	2538	2	novel_not_in_catalog	H6PD	novel	9146	5	NA	NA	-3001	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	529	1590	752	2341	30.0	NA	False	AATAAA	-12
PB.12.1	chr1	-	1925	7	full-splice_match	SDF4	ENST00000360001.10	1956	7	1	30	1	-4	multi-exon	FALSE	canonical	1	1038815	junction_6	519017.0984469908	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	284	1351	25.0	0	True	NA	NA
PB.12.2	chr1	-	2384	7	novel_not_in_catalog	SDF4	novel	1956	7	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	36374	junction_6	838633.3936277421	NA	3	NA	TRUE	NA	NA	NA	C	coding	355	1068	714	1781	30.0	-1	True	AATATA	-23
PB.12.3	chr1	-	2137	7	full-splice_match	SDF4	ENST00000263741.11	2079	7	-36	-22	-36	-1	multi-exon	FALSE	canonical	1	62802	junction_1	818409.3944873936	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	351	1376	30.0	-1	True	AATATA	-23
PB.12.4	chr1	-	2013	7	novel_in_catalog	SDF4	novel	1956	7	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	1	3927	junction_3	890379.0591723187	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	265	1410	30.0	19	True	AATATA	-23
PB.12.5	chr1	-	1780	8	novel_not_in_catalog	SDF4	novel	1956	7	NA	NA	11	-7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	825936.531539803	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	188	1183	10.0	10	True	AATATA	-17
PB.12.6	chr1	-	6257	6	novel_in_catalog	SDF4	novel	1956	7	NA	NA	6	-9	intron_retention	FALSE	canonical	1	1038815	junction_5	543124.8911738809	NA	37	NA	TRUE	NA	NA	NA	C	coding	130	393	5270	5662	10.0	5	True	AATATA	-15
PB.8957.7	chr4	+	2273	5	incomplete-splice_match	AC093752.1	ENST00000508519.5	849	7	-4	28860	-4	2667	3prime_fragment	FALSE	canonical	1	67038	junction_4	20128.527223507932	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	19	True	ATTAAA	-23
PB.8957.4	chr4	+	3256	9	novel_in_catalog	AC093752.1	novel	605	3	NA	NA	-14	1395	combination_of_known_junctions	FALSE	canonical	1	4708	junction_7	44570.526831079755	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-10	True	NA	NA
PB.7344.15	chr20	-	2884	10	novel_not_in_catalog	ZNFX1	novel	5235	15	NA	NA	5	-2	any annotated donor/acceptor	FALSE	canonical	1	249	junction_9	98034.4564174338	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2676	208	2883	80.0	-4	True	NA	NA
PB.5567.1	chr19	+	2827	7	full-splice_match	NDUFS7	ENST00000313408.11	2818	7	-2	-7	2	0	multi-exon	FALSE	canonical	1	746779	junction_1	314191.87941681786	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	26	646	20.0	-5	True	AATAAA	-25
PB.5567.2	chr19	+	2893	6	full-splice_match	NDUFS7	ENST00000538662.5	1186	6	4	-1711	0	0	multi-exon	FALSE	canonical	1	746779	junction_1	329238.09797385236	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	24	470	20.0	-3	True	AATAAA	-25
PB.5567.3	chr19	+	762	8	full-splice_match	NDUFS7	ENST00000233627.13	1039	8	276	1	0	0	multi-exon	FALSE	canonical	1	746779	junction_1	304738.3120285338	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	21	662	20.0	0	True	AATAAA	-25
PB.7344.11	chr20	-	2869	9	novel_not_in_catalog	ZNFX1	novel	5235	15	NA	NA	-51	0	any annotated donor/acceptor	FALSE	canonical	1	5217	junction_1	82135.36705104187	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2724	145	2868	80.0	-60	True	NA	NA
PB.7344.10	chr20	-	2830	9	incomplete-splice_match	ZNFX1	ENST00000396105.5	7371	14	95	10034	-59	-1	3prime_fragment	FALSE	canonical	1	91040	junction_8	55049.56145147752	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2676	153	2828	80.0	-68	True	NA	NA
PB.7344.13	chr20	-	2455	9	novel_not_in_catalog	ZNFX1	novel	5235	15	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	88020.75572334843	NA	1	1	TRUE	NA	NA	NA	C	coding	790	2370	86	2455	80.0	-1	True	NA	NA
PB.3760.9	chr15	-	2700	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	12	2727	12	1970	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	337	2409	40.0	11	True	TATAAA	-17
PB.10986.47	chr8	-	1833	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	140	1902	0	-56	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	115	1134	50.0	-3	True	NA	NA
PB.7825.1	chr22	+	7200	7	full-splice_match	CCDC134	ENST00000255784.5	1270	7	-56	-5874	-56	5874	multi-exon	FALSE	canonical	1	55783	junction_1	26926.309678763384	NA	3	NA	TRUE	NA	NA	NA	C	coding	229	690	161	850	20.0	-3	True	NA	NA
PB.9469.2	chr5	-	2850	1	genic	AC106791.1	novel	NA	NA	NA	NA	-39	-3733	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	2	True	AATAAA	-17
PB.9469.1	chr5	-	2225	3	full-splice_match	AC106791.1	ENST00000508281.2	1148	3	1	-1078	1	1078	multi-exon	FALSE	canonical	1	16081	junction_1	6879.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-17	True	NA	NA
PB.7825.2	chr22	+	2268	1	genic	CCDC134	novel	NA	NA	NA	NA	-33	-22980	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	104	315	2	316	90.0	20	True	NA	NA
PB.8642.2	chr4	+	2445	4	novel_not_in_catalog	ZNF718	novel	3495	4	NA	NA	-9	-27983	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-16	False	NA	NA
PB.3760.8	chr15	-	3630	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	1	1808	1	-1808	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	348	2420	20.0	0	True	AGTAAA	-22
PB.118.4	chr1	-	2541	11	novel_not_in_catalog	FBXO42	novel	6202	10	NA	NA	-19	428	any annotated donor/acceptor	FALSE	canonical	1	10792	junction_10	77008.5222354643	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	372	2525	5.0	-1	True	NA	NA
PB.11888.3	chr9	+	4563	3	full-splice_match	BRD3OS	ENST00000603928.2	5722	3	33	1126	-14	0	multi-exon	FALSE	canonical	1	93761	junction_1	31868.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	3398	3775	25.0	-18	True	AATAAA	-16
PB.7334.18	chr20	-	3748	21	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-8	-20	no_combination_of_known_junctions	FALSE	canonical	1	2965	junction_16	102433.77768366986	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	59	3448	90.0	1	True	NA	NA
PB.1538.24	chr10	+	4114	19	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	9043	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	108952.06831878575	NA	2	1	TRUE	NA	NA	NA	C	coding	725	2178	549	2726	40.0	-7620	False	AATAAA	-18
PB.1538.20	chr10	+	3153	21	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	50	-14	any annotated donor/acceptor	FALSE	canonical	1	358	junction_7	105605.15463584152	NA	13	2	TRUE	NA	NA	NA	C	coding	555	1665	1489	3153	65.0	24	True	ATTAAA	-32
PB.6894.19	chr2	+	2404	12	novel_not_in_catalog	GULP1	novel	2643	13	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	2247	junction_4	70258.96090808843	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	982	1356	85.0	-1	True	NA	NA
PB.11768.10	chr9	+	3570	7	full-splice_match	MRRF	ENST00000344641.7	9826	7	226	6030	-5	1852	multi-exon	FALSE	canonical	1	80395	junction_1	36995.207292071405	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	86	874	30.0	-12	True	AATAAA	-34
PB.5674.2	chr19	+	1818	12	full-splice_match	CERS4	ENST00000251363.9	1797	12	-24	3	3	0	multi-exon	FALSE	canonical	1	69570	junction_1	137937.06681198574	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	325	1509	30.0	-41	True	ATTAAA	-13
PB.9294.1	chr5	+	3352	13	novel_in_catalog	HEXB	novel	2021	14	NA	NA	2	-2	intron_retention	FALSE	canonical	1	929487	junction_1	323812.5449600003	NA	15	2	TRUE	NA	NA	NA	C	coding	474	1425	116	1540	20.0	0	True	AATAAA	-16
PB.9294.3	chr5	+	1810	14	full-splice_match	HEXB	ENST00000261416.11	1901	14	89	2	27	-1	multi-exon	FALSE	canonical	1	929487	junction_1	321084.66490594554	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	29	1699	20.0	0	True	AATAAA	-17
PB.9294.2	chr5	+	2738	10	incomplete-splice_match	HEXB	ENST00000261416.11	1901	14	36	1510	-16	-1058	intron_retention	FALSE	canonical	1	929487	junction_1	115986.26535654135	NA	1	1	TRUE	NA	NA	NA	C	coding	449	1350	82	1431	60.0	3	True	NA	NA
PB.5674.1	chr19	+	1940	13	novel_in_catalog	CERS4	novel	531	4	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	16885	junction_3	172824.07664394836	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	447	1631	30.0	-46	True	ATTAAA	-13
PB.8946.3	chr4	+	2013	13	full-splice_match	LARP7	ENST00000509622.5	2020	13	6	1	6	-1	multi-exon	FALSE	canonical	1	47621	junction_2	175784.7217002748	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	244	1755	25.0	-38	True	AATAAA	-16
PB.11253.1	chr8	+	3303	5	full-splice_match	SDC2	ENST00000302190.8	3759	5	439	17	-23	-17	multi-exon	FALSE	canonical	1	703003	junction_1	98841.16545593491	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	570	1088	50.0	-23	False	AATAAA	-13
PB.7334.19	chr20	-	3714	21	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-27	-20	no_combination_of_known_junctions	FALSE	canonical	1	4070	junction_20	102772.72424017717	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	427	3414	90.0	4110	False	NA	NA
PB.7179.8	chr20	-	2880	3	full-splice_match	FLRT3	ENST00000341420.4	3971	3	-41	1132	-41	-1132	multi-exon	FALSE	canonical	1	24561	junction_1	8260.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	501	2450	65.0	-27	False	AATAAA	-5
PB.10961.3	chr8	-	2847	3	full-splice_match	TDRP	ENST00000324079.10	3395	3	131	417	-22	-417	multi-exon	FALSE	canonical	1	47034	junction_2	41470.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	111	668	20.0	-34	True	ATTAAA	-22
PB.10961.2	chr8	-	3101	3	full-splice_match	TDRP	ENST00000324079.10	3395	3	159	135	6	-135	multi-exon	FALSE	canonical	1	47034	junction_2	41470.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	83	640	15.0	-6	True	AATAAA	-27
PB.10961.1	chr8	-	3278	3	full-splice_match	TDRP	ENST00000324079.10	3395	3	128	-11	-25	0	multi-exon	FALSE	canonical	1	47034	junction_2	41470.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	114	671	20.0	-37	True	AATAAA	-25
PB.5674.7	chr19	+	1651	11	novel_in_catalog	CERS4	novel	531	4	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	5273	junction_1	136532.28564412886	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	158	1342	30.0	1	True	ATTAAA	-13
PB.5674.6	chr19	+	1924	13	novel_not_in_catalog	CERS4	novel	531	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	5555	junction_2	177796.00517515306	NA	1	1	TRUE	NA	NA	NA	C	coding	394	1185	431	1615	30.0	1	True	ATTAAA	-13
PB.11098.11	chr8	+	5071	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-26	-358	combination_of_known_junctions	FALSE	canonical	1	188558	junction_1	141990.6350805446	NA	9	NA	TRUE	NA	NA	NA	C	coding	776	2331	347	2677	45.0	0	True	AATAAA	-23
PB.12157.10	chrX	+	5169	24	novel_in_catalog	ATP7A	novel	8289	22	NA	NA	15	-3485	no_combination_of_known_junctions	FALSE	canonical	1	19094	junction_2	19940.276802025564	NA	1	NA	TRUE	NA	NA	NA	C	coding	1500	4503	333	4835	75.0	24	True	NA	NA
PB.12157.11	chrX	+	5405	22	novel_in_catalog	ATP7A	novel	8289	22	NA	NA	-3	-2844	no_combination_of_known_junctions	FALSE	canonical	1	4340	junction_14	20845.06751859718	NA	0	NA	TRUE	NA	NA	NA	C	coding	1435	4308	123	4430	15.0	42	True	ATTAAA	-44
PB.12157.12	chrX	+	4742	22	novel_in_catalog	ATP7A	novel	8289	22	NA	NA	1	-3501	no_combination_of_known_junctions	FALSE	canonical	1	4340	junction_14	20845.06751859718	NA	0	NA	TRUE	NA	NA	NA	C	coding	1435	4308	117	4424	70.0	48	True	NA	NA
PB.12157.13	chrX	+	5171	25	novel_in_catalog	ATP7A	novel	8289	22	NA	NA	2	-3502	combination_of_known_junctions	FALSE	canonical	1	3169	junction_2	24410.43322692961	NA	1	NA	TRUE	NA	NA	NA	C	coding	1500	4503	352	4854	65.0	49	True	NA	NA
PB.7831.1	chr22	+	2334	3	full-splice_match	PHETA2	ENST00000321753.7	2335	3	1	0	1	0	multi-exon	FALSE	canonical	1	37811	junction_1	16455.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	259	780	187	966	5.0	-6	True	AGTAAA	-19
PB.9475.1	chr5	+	4145	5	full-splice_match	FAM53C	ENST00000239906.9	4377	5	230	2	-4	-2	multi-exon	FALSE	canonical	1	134354	junction_1	100301.16753183883	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	199	1377	25.0	-4	True	AATAAA	-31
PB.9475.2	chr5	+	3993	5	full-splice_match	FAM53C	ENST00000239906.9	4377	5	233	151	-1	-151	multi-exon	FALSE	canonical	1	134354	junction_1	100301.16753183883	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	196	1374	70.0	-1	True	NA	NA
PB.2977.1	chr12	+	3177	18	novel_in_catalog	AC069503.2	novel	576	4	NA	NA	3261	48495	no_combination_of_known_junctions	TRUE	canonical	1	3068	junction_1	14664.88849606693	NA	1	NA	TRUE	NA	NA	NA	A	coding	932	2799	123	2921	10.0	2	True	TATAAA	-15
PB.11098.12	chr8	+	5270	13	full-splice_match	TACC1	ENST00000317827.8	7802	13	7	2525	7	-272	multi-exon	FALSE	canonical	1	188558	junction_1	141129.10505298176	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	373	2790	35.0	3	True	AATAAA	-17
PB.8720.12	chr4	+	3734	11	novel_not_in_catalog	AC104662.2	novel	1388	10	NA	NA	73368	2707	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	95231.73919597393	NA	3	NA	TRUE	NA	NA	NA	C	coding	481	1446	134	1579	35.0	-2	True	ATTAAA	-9
PB.11098.16	chr8	+	3349	3	incomplete-splice_match	TACC1	ENST00000524354.5	476	4	1561	-2614	-28	2002	5prime_fragment	FALSE	canonical	1	188558	junction_1	51363.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	464	1395	349	1743	100.0	-2	True	NA	NA
PB.361.2	chr1	-	3201	14	full-splice_match	SLC6A9	ENST00000372310.7	3130	14	-76	5	0	-5	multi-exon	FALSE	canonical	1	66991	junction_13	45425.30802844698	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	243	2144	5.0	-1	True	AATGAA	-16
PB.11641.9	chr9	-	4475	17	novel_not_in_catalog	SEMA4D	novel	4258	19	NA	NA	-7834	-1	any annotated donor/acceptor	FALSE	canonical	1	389	junction_16	97274.37451024486	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	427	3009	25.0	9915	False	AATAAA	-18
PB.361.1	chr1	-	3324	15	novel_in_catalog	SLC6A9	novel	2162	12	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	3738	junction_13	66667.60418980244	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	201	2264	5.0	-3	True	AATGAA	-19
PB.6401.6	chr2	+	5205	16	novel_in_catalog	SPAST	novel	5277	17	NA	NA	30	0	no_combination_of_known_junctions	FALSE	canonical	1	1178	junction_15	51043.44844733313	NA	9	NA	TRUE	NA	NA	NA	C	coding	483	1452	514	1965	15.0	2	True	AATAAA	-12
PB.9357.22	chr5	+	3650	18	novel_not_in_catalog	LNPEP	novel	2075	2	NA	NA	-3610	1	any annotated donor/acceptor	TRUE	canonical	1	4479	junction_1	55552.30981260428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	111	3146	20.0	0	True	AATAAA	-22
PB.11243.9	chr8	+	2776	19	full-splice_match	DPY19L4	ENST00000414645.6	6197	19	-19	3440	6	561	multi-exon	FALSE	canonical	1	69946	junction_7	37462.42944773528	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	119	2290	35.0	-19	True	AATAAA	-20
PB.7346.10	chr20	-	2667	1	incomplete-splice_match	B4GALT5	ENST00000371711.4	4722	9	77760	507	77760	-507	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	128	387	605	991	70.0	NA	False	NA	NA
PB.11243.7	chr8	+	3164	19	full-splice_match	DPY19L4	ENST00000414645.6	6197	19	-20	3053	5	948	multi-exon	FALSE	canonical	1	69946	junction_7	37462.42944773528	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	120	2291	50.0	-20	True	ATTAAA	-11
PB.11243.6	chr8	+	5665	20	novel_not_in_catalog	DPY19L4	novel	680	4	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	45324.34147330681	NA	2	1	TRUE	NA	NA	NA	C	coding	723	2172	121	2292	30.0	-21	True	AATAAA	-16
PB.11243.5	chr8	+	1954	17	incomplete-splice_match	DPY19L4	ENST00000414645.6	6197	19	-22	10049	3	-6048	3prime_fragment	FALSE	canonical	1	69946	junction_7	39352.464458841394	NA	3	NA	TRUE	NA	NA	NA	C	coding	611	1833	122	1954	60.0	-22	True	NA	NA
PB.7862.1	chr22	+	3492	1	incomplete-splice_match	PPARA	ENST00000262735.9	9965	8	87826	1843	61656	-1842	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	84	255	432	686	95.0	NA	False	NA	NA
PB.11641.8	chr9	-	4623	17	novel_in_catalog	SEMA4D	novel	4258	19	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	43754	junction_16	90157.3180109834	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	574	3156	25.0	-25	True	AATAAA	-19
PB.10374.1	chr7	-	3233	2	incomplete-splice_match	GNA12	ENST00000407653.1	3785	3	29642	0	26954	0	5prime_fragment	FALSE	canonical	1	413583	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	157	474	145	618	40.0	1586	False	AATAAA	-8
PB.11243.1	chr8	+	5535	19	novel_not_in_catalog	DPY19L4	novel	680	4	NA	NA	1	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_18	51274.278363348014	NA	2	NA	TRUE	NA	NA	NA	C	coding	618	1857	314	2170	30.0	-24	True	AATAAA	-16
PB.6489.28	chr2	-	4413	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-54	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	4	1	TRUE	NA	NA	NA	C	coding	1067	3204	325	3528	20.0	11	True	AATAAA	-15
PB.6736.5	chr2	+	7617	41	full-splice_match	UGGT1	ENST00000259253.10	10650	41	-135	3168	-24	1081	multi-exon	FALSE	canonical	1	101592	junction_1	99023.00664354472	NA	2	NA	TRUE	NA	NA	NA	C	coding	1555	4668	183	4850	35.0	-24	True	TATAAA	-20
PB.118.1	chr1	-	2681	11	novel_not_in_catalog	FBXO42	novel	6202	10	NA	NA	-19	571	any annotated donor/acceptor	FALSE	canonical	1	10080	junction_10	77168.54241003908	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	369	2522	70.0	-1	True	NA	NA
PB.3718.2	chr14	+	1777	3	full-splice_match	LINC00221	ENST00000603633.2	1656	3	-21	-100	-2	100	multi-exon	FALSE	canonical	1	15709	junction_1	3075.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	4	True	ATTAAA	-10
PB.10180.3	chr6	-	2178	10	full-splice_match	ZUP1	ENST00000368576.7	2195	10	17	0	17	0	multi-exon	FALSE	canonical	1	83489	junction_9	28985.968820179954	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	228	1964	15.0	-12	True	AATAAA	-22
PB.3718.1	chr14	+	4530	3	full-splice_match	LINC00221	ENST00000620337.4	484	3	-2	-4044	-2	-921	multi-exon	FALSE	canonical	1	643	junction_2	7533.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	4	True	NA	NA
PB.8907.9	chr4	-	2806	6	incomplete-splice_match	SLC9B2	ENST00000394785.7	3126	12	23	21919	23	1182	3prime_fragment	FALSE	canonical	1	117053	junction_5	46882.52190998262	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	610	1326	90.0	-32	True	NA	NA
PB.8907.8	chr4	-	3025	8	incomplete-splice_match	SLC9B2	ENST00000394785.7	3126	12	12	17991	12	-1436	3prime_fragment	FALSE	canonical	1	76784	junction_2	49181.60563645307	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	621	1652	55.0	-43	True	ATTAAA	-14
PB.9480.1	chr5	-	4419	17	full-splice_match	HSPA9	ENST00000649126.1	4727	17	302	6	-6	-6	multi-exon	TRUE	canonical	1	478276	junction_10	650464.7146484965	NA	2	NA	TRUE	NA	NA	NA	C	coding	679	2040	105	2144	45.0	252	False	NA	NA
PB.8907.5	chr4	-	2691	12	full-splice_match	SLC9B2	ENST00000394785.7	3126	12	428	7	-9	-7	multi-exon	FALSE	canonical	1	76784	junction_6	44978.748333918214	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	205	1818	25.0	-36	True	AATAAA	-42
PB.8907.4	chr4	-	2984	11	novel_in_catalog	SLC9B2	novel	2300	13	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	24407	junction_1	53350.69693537283	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	631	2055	25.0	-53	True	AATAAA	-20
PB.8907.7	chr4	-	2711	12	novel_in_catalog	SLC9B2	novel	2300	13	NA	NA	-8	-10	combination_of_known_junctions	TRUE	canonical	1	6932	junction_11	55911.06327385684	NA	6	NA	TRUE	NA	NA	NA	C	coding	537	1614	228	1841	25.0	-14	True	AATAAA	-39
PB.9357.25	chr5	+	2554	1	genic	LNPEP	novel	NA	NA	NA	NA	-182	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	157	474	945	1418	20.0	-868	False	ATTAAA	-17
PB.8907.1	chr4	-	2390	13	full-splice_match	SLC9B2	ENST00000362026.7	2300	13	-448	358	22	4	multi-exon	TRUE	canonical	1	21918	junction_1	51195.1670040873	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	611	2224	25.0	-33	True	NA	NA
PB.9480.2	chr5	-	3251	17	full-splice_match	HSPA9	ENST00000297185.8	2825	17	-28	-398	-13	398	multi-exon	FALSE	canonical	1	478276	junction_10	650464.7146484965	NA	1	NA	TRUE	NA	NA	NA	C	coding	679	2040	112	2151	30.0	245	False	ATTAAA	-24
PB.8907.3	chr4	-	6054	10	full-splice_match	SLC9B2	ENST00000503103.5	1911	10	-441	-3702	0	-2024	multi-exon	FALSE	canonical	1	24407	junction_1	60748.41232310337	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	633	1886	30.0	-55	True	NA	NA
PB.8907.2	chr4	-	5825	11	novel_in_catalog	SLC9B2	novel	2300	13	NA	NA	-35	-2022	combination_of_known_junctions	FALSE	canonical	1	24407	junction_1	53350.69693537283	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	231	1655	30.0	-62	True	NA	NA
PB.6426.5	chr2	-	2704	14	full-splice_match	HNRNPLL	ENST00000409636.5	3980	14	69	1207	6	1	multi-exon	FALSE	non_canonical	0	0	junction_9	167286.99024655647	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	94	1707	5.0	-7	True	NA	NA
PB.6426.4	chr2	-	3341	13	novel_not_in_catalog	HNRNPLL	novel	4173	13	NA	NA	20	-581	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	178359.8310061869	NA	2	1	TRUE	NA	NA	NA	C	coding	437	1314	405	1718	25.0	11	True	AATAAA	-16
PB.6736.4	chr2	+	4928	41	full-splice_match	UGGT1	ENST00000259253.10	10650	41	-137	5859	-26	-129	multi-exon	FALSE	canonical	1	101592	junction_1	99023.00664354472	NA	0	NA	TRUE	NA	NA	NA	C	coding	1555	4668	185	4852	35.0	-26	True	AATAAA	-23
PB.10993.3	chr8	-	2801	8	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	3	1337	combination_of_known_junctions	FALSE	canonical	1	6579	junction_6	209721.3306229123	NA	4	NA	TRUE	NA	NA	NA	C	coding	204	615	698	1312	30.0	4	True	AATAAA	-22
PB.10993.4	chr8	-	2596	8	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	8	1337	combination_of_known_junctions	FALSE	canonical	1	1513	junction_7	198029.4659582616	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	250	1107	30.0	-7	True	AATAAA	-22
PB.10993.5	chr8	-	2530	7	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	-1	1337	combination_of_known_junctions	FALSE	canonical	1	3791	junction_6	186320.796726521	NA	2	NA	TRUE	NA	NA	NA	C	coding	285	858	184	1041	30.0	977	False	AATAAA	-22
PB.10993.6	chr8	-	2619	7	full-splice_match	CNOT7	ENST00000361272.8	6913	7	26	4268	3	1336	multi-exon	FALSE	canonical	1	28667	junction_6	180117.05344804403	NA	5	NA	TRUE	NA	NA	NA	C	coding	285	858	274	1131	30.0	4	True	AATAAA	-21
PB.6426.2	chr2	-	3911	14	full-splice_match	HNRNPLL	ENST00000409636.5	3980	14	75	-6	12	6	multi-exon	FALSE	non_canonical	0	0	junction_9	167286.99024655647	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	88	1701	30.0	-1	True	AATAAA	-20
PB.10993.8	chr8	-	1300	7	full-splice_match	CNOT7	ENST00000361272.8	6913	7	26	5587	3	17	multi-exon	FALSE	canonical	1	28667	junction_6	180117.05344804403	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	274	1131	90.0	4	True	NA	NA
PB.10993.9	chr8	-	3491	6	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	0	17	intron_retention	FALSE	canonical	1	28667	junction_5	170975.78595625755	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	287	973	90.0	-9	True	NA	NA
PB.6426.9	chr2	-	2410	13	novel_not_in_catalog	HNRNPLL	novel	4173	13	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	178359.8310061869	NA	2	1	TRUE	NA	NA	NA	C	coding	437	1314	424	1737	25.0	-8	True	TATAAA	-13
PB.6426.8	chr2	-	2363	14	novel_not_in_catalog	HNRNPLL	novel	4173	13	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	167286.99024655647	NA	88	7	TRUE	NA	NA	NA	C	coding	237	714	977	1690	25.0	354	False	TATAAA	-13
PB.3428.34	chr14	-	2785	19	incomplete-splice_match	NIN	ENST00000324330.13	4364	29	-51	28782	-51	-15243	3prime_fragment	FALSE	canonical	1	48689	junction_18	99378.16877531906	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2541	243	2783	55.0	1841	False	ATTAAA	-43
PB.3428.35	chr14	-	4041	18	incomplete-splice_match	NIN	ENST00000453196.5	6785	30	-18	29962	-18	13320	3prime_fragment	FALSE	canonical	1	48689	junction_17	103171.65709645108	NA	1	NA	TRUE	NA	NA	NA	C	coding	1277	3831	210	4040	60.0	22	True	NA	NA
PB.3428.36	chr14	-	2246	17	incomplete-splice_match	NIN	ENST00000453196.5	6785	30	-39	33004	-39	10278	3prime_fragment	FALSE	canonical	1	48689	junction_16	95635.81534124323	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2016	231	2246	50.0	1	True	AAAACA	-14
PB.3428.37	chr14	-	2094	15	incomplete-splice_match	NIN	ENST00000453196.5	6785	30	-38	36499	-38	6783	3prime_fragment	FALSE	canonical	1	48689	junction_14	97677.11241762267	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	230	2032	95.0	2	True	TATAAA	-23
PB.3428.30	chr14	-	4482	28	novel_in_catalog	NIN	novel	10293	31	NA	NA	-39	1	no_combination_of_known_junctions	FALSE	canonical	1	11112	junction_26	112107.19313167567	NA	1	1	TRUE	NA	NA	NA	C	coding	1111	3336	693	4028	10.0	1	True	AATAAA	-15
PB.3428.31	chr14	-	6622	29	novel_in_catalog	NIN	novel	10293	31	NA	NA	-40	1	no_combination_of_known_junctions	FALSE	canonical	1	11112	junction_27	118109.9976387186	NA	0	NA	TRUE	NA	NA	NA	C	coding	1824	5475	694	6168	10.0	0	True	AATAAA	-15
PB.3428.32	chr14	-	3985	27	incomplete-splice_match	NIN	ENST00000324330.13	4364	29	-100	9727	-100	3812	3prime_fragment	FALSE	canonical	1	48689	junction_26	95110.80832560825	NA	1	NA	TRUE	NA	NA	NA	C	coding	1231	3693	292	3984	55.0	1792	False	AATGAA	-2
PB.3428.33	chr14	-	3703	25	novel_in_catalog	NIN	novel	10293	31	NA	NA	-40	1122	no_combination_of_known_junctions	FALSE	canonical	1	1990	junction_24	94468.84811604967	NA	4	NA	TRUE	NA	NA	NA	C	coding	1175	3525	178	3702	55.0	0	True	NA	NA
PB.5163.1	chr17	-	6046	20	full-splice_match	BRIP1	ENST00000259008.6	6048	20	-7	9	-7	-9	multi-exon	FALSE	canonical	1	55695	junction_19	20709.540728638473	NA	0	NA	TRUE	NA	NA	NA	C	coding	1249	3750	276	4025	40.0	-51	True	AATAAA	-18
PB.5163.2	chr17	-	5962	20	novel_not_in_catalog	BRIP1	novel	6048	20	NA	NA	16	-10	any annotated donor/acceptor	FALSE	canonical	1	3704	junction_7	27966.79477751113	NA	1	NA	TRUE	NA	NA	NA	C	coding	1229	3690	253	3942	45.0	-28	True	AATAAA	-17
PB.5163.3	chr17	-	3979	20	full-splice_match	BRIP1	ENST00000259008.6	6048	20	6	2063	6	1443	multi-exon	FALSE	canonical	1	55695	junction_19	20709.540728638473	NA	2	1	TRUE	NA	NA	NA	C	coding	1239	3717	263	3979	45.0	-38	True	AATAAA	-23
PB.5163.4	chr17	-	3000	17	novel_in_catalog	BRIP1	novel	6048	20	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	1	7182	junction_1	28584.06988597134	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	276	2834	40.0	-51	True	AATAAA	-18
PB.5163.5	chr17	-	2359	14	incomplete-splice_match	BRIP1	ENST00000259008.6	6048	20	6	95135	6	0	3prime_fragment	FALSE	canonical	1	55695	junction_13	20259.391827761494	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2097	263	2359	30.0	-38	True	NA	NA
PB.5163.6	chr17	-	1985	12	novel_not_in_catalog	BRIP1	novel	6048	20	NA	NA	0	-4512	any annotated donor/acceptor	FALSE	canonical	1	29823	junction_11	24587.16264252379	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1719	265	1983	60.0	-44	True	NA	NA
PB.11128.8	chr8	-	4473	16	incomplete-splice_match	RB1CC1	ENST00000025008.9	6635	24	-24	23308	10	12121	3prime_fragment	FALSE	canonical	1	145642	junction_15	72813.2516534975	NA	0	NA	TRUE	NA	NA	NA	C	coding	1308	3924	549	4472	75.0	-22	True	AAAAAG	-28
PB.1909.4	chr11	+	1818	11	novel_in_catalog	CD82	novel	538	7	NA	NA	-2	54	combination_of_known_junctions	FALSE	canonical	1	1951	junction_3	461872.9949154962	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	378	1181	100.0	1	True	NA	NA
PB.1909.5	chr11	+	2562	9	incomplete-splice_match	CD82	ENST00000227155.8	2289	10	50	2	0	-2	intron_retention	FALSE	canonical	1	840784	junction_4	157180.39280950406	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	199	930	25.0	3	True	ATTAAA	-18
PB.1909.6	chr11	+	2233	10	full-splice_match	CD82	ENST00000227155.8	2289	10	55	1	4	-1	multi-exon	FALSE	canonical	1	840784	junction_4	155607.85429342077	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	194	997	25.0	8	True	ATTAAA	-19
PB.1909.7	chr11	+	1616	10	full-splice_match	CD82	ENST00000227155.8	2289	10	74	599	-2	55	multi-exon	FALSE	canonical	1	840784	junction_4	155607.85429342077	NA	66	3	TRUE	NA	NA	NA	C	coding	267	804	175	978	100.0	0	True	NA	NA
PB.8092.29	chr3	-	2842	11	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1764	1168	intron_retention	FALSE	non_canonical	0	0	junction_1	90280.9667250523	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	1525	2568	30.0	1	True	NA	NA
PB.1909.1	chr11	+	2028	9	incomplete-splice_match	CD82	ENST00000227155.8	2289	10	-14	600	-14	54	intron_retention	FALSE	canonical	1	840784	junction_4	157180.39280950406	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	263	994	100.0	-3863	False	NA	NA
PB.1909.2	chr11	+	2195	11	novel_not_in_catalog	CD82	novel	538	7	NA	NA	-3	1436	any annotated donor/acceptor	FALSE	canonical	1	2999	junction_10	356563.88747914444	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	202	1005	20.0	0	True	CATAAA	-30
PB.1909.3	chr11	+	2825	7	incomplete-splice_match	CD82	ENST00000227155.8	2289	10	48	2803	-2	-693	3prime_fragment	FALSE	canonical	1	840784	junction_4	156099.1726461276	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	201	749	100.0	1	True	NA	NA
PB.3444.18	chr14	-	3326	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	-34	2311	-34	-252	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	2	NA	TRUE	NA	NA	NA	C	coding	872	2619	219	2837	50.0	-3	True	AATATA	-25
PB.2920.16	chr12	+	4540	8	incomplete-splice_match	OAS3	ENST00000228928.11	6719	16	24465	2	-1521	-2	5prime_fragment	FALSE	canonical	1	185555	junction_3	39434.19198034691	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	49	1266	15.0	-9994	False	NA	NA
PB.1909.8	chr11	+	1450	10	full-splice_match	CD82	ENST00000227155.8	2289	10	74	765	-2	-111	multi-exon	FALSE	canonical	1	840784	junction_4	155607.85429342077	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	175	978	75.0	0	True	NA	NA
PB.1909.9	chr11	+	2264	11	novel_in_catalog	CD82	novel	538	7	NA	NA	-2	-9	combination_of_known_junctions	TRUE	canonical	1	5511	junction_1	459134.1605951794	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	233	1036	30.0	0	True	ATTAAA	-11
PB.6805.10	chr2	+	2172	9	novel_in_catalog	TANK	novel	2152	8	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	32704	junction_2	218643.06704389091	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	68	1519	20.0	-5	True	ATTAAA	-12
PB.9467.1	chr5	-	6620	15	full-splice_match	KLHL3	ENST00000309755.8	6806	15	190	-4	-42	4	multi-exon	FALSE	canonical	1	20696	junction_4	6617.004134371212	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	255	2018	20.0	-13	True	AATAAA	-21
PB.932.1	chr1	-	2564	9	full-splice_match	VAMP4	ENST00000474047.5	1738	9	96	-922	96	-10	multi-exon	FALSE	canonical	1	24765	junction_1	55761.14227093429	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	105	530	60.0	-4	True	AATAAA	-12
PB.9467.2	chr5	-	2973	15	full-splice_match	KLHL3	ENST00000309755.8	6806	15	75	3758	0	-37	multi-exon	FALSE	canonical	1	20696	junction_4	6617.004134371212	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	370	2133	85.0	-1	True	NA	NA
PB.11388.1	chr8	+	1814	7	full-splice_match	GRINA	ENST00000395068.8	1814	7	1	-1	1	1	multi-exon	FALSE	canonical	1	627055	junction_1	972628.7334923417	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	124	1239	5.0	0	True	AATAAA	-19
PB.11388.3	chr8	+	2009	6	novel_in_catalog	GRINA	novel	1968	7	NA	NA	-12	0	intron_retention	FALSE	canonical	1	627055	junction_1	1062607.322666167	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	154	1548	5.0	-30	True	AATAAA	-18
PB.11388.2	chr8	+	2123	6	novel_in_catalog	GRINA	novel	1968	7	NA	NA	11	0	intron_retention	TRUE	canonical	1	206160	junction_1	1188134.7420210217	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	268	1662	5.0	-32	True	AATAAA	-18
PB.11388.5	chr8	+	2051	5	novel_in_catalog	GRINA	novel	1968	7	NA	NA	2	0	intron_retention	FALSE	canonical	1	627055	junction_1	1185622.6869140062	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	1091	1477	5.0	1	True	AATAAA	-18
PB.11388.4	chr8	+	1927	7	full-splice_match	GRINA	ENST00000313269.5	1968	7	41	0	-1	0	multi-exon	FALSE	canonical	1	206160	junction_1	1089447.6325364255	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	238	1353	5.0	-2	True	AATAAA	-18
PB.11388.6	chr8	+	1804	6	incomplete-splice_match	GRINA	ENST00000395068.8	1814	7	1011	-1	-183	1	5prime_fragment	FALSE	canonical	1	1250290	junction_1	751555.1208556829	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	114	1229	5.0	-1927	False	AATAAA	-19
PB.11128.1	chr8	-	6627	24	full-splice_match	RB1CC1	ENST00000435644.6	6614	24	-14	1	0	-1	multi-exon	FALSE	canonical	1	145642	junction_23	95518.20135035024	NA	63	7	TRUE	NA	NA	NA	C	coding	1591	4776	530	5305	25.0	-3	True	AATAAA	-15
PB.5173.3	chr17	-	1357	4	full-splice_match	LIMD2	ENST00000579814.1	709	4	11	-659	-8	8	multi-exon	FALSE	canonical	1	475650	junction_3	390836.77485819516	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	3	True	AATAGA	-13
PB.5173.2	chr17	-	1309	5	full-splice_match	LIMD2	ENST00000259006.7	3193	5	-13	1897	-13	17	multi-exon	FALSE	canonical	1	475650	junction_4	346808.2231687997	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	173	556	10.0	4241	False	AATAGA	-22
PB.5173.1	chr17	-	3210	5	full-splice_match	LIMD2	ENST00000259006.7	3193	5	13	-30	5	30	multi-exon	FALSE	canonical	1	475650	junction_4	346808.2231687997	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	147	530	25.0	-3	True	AATAAA	-40
PB.10983.8	chr8	+	2609	1	novel_in_catalog	BLK	novel	2159	12	NA	NA	-7491	-8255	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-7809	False	NA	NA
PB.10983.7	chr8	+	2215	13	full-splice_match	BLK	ENST00000259089.8	2606	13	385	6	-4	0	multi-exon	FALSE	canonical	1	143771	junction_2	21134.087076956715	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	208	1725	10.0	-1	True	AATAAA	-15
PB.10983.6	chr8	+	3339	12	novel_in_catalog	BLK	novel	2159	12	NA	NA	-4	0	intron_retention	FALSE	canonical	1	143771	junction_2	21541.349997597838	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	208	1335	10.0	-1	True	AATAAA	-15
PB.6965.1	chr2	+	1831	1	incomplete-splice_match	NRP2	ENST00000360409.7	6662	17	113800	3	31963	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	125	False	AATAAA	-14
PB.10983.4	chr8	+	2120	12	full-splice_match	BLK	ENST00000529894.1	2017	12	-33	-70	-33	0	multi-exon	FALSE	canonical	1	20984	junction_1	50226.78753101726	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	326	1630	10.0	-3	True	AATAAA	-15
PB.10983.3	chr8	+	3114	9	incomplete-splice_match	BLK	ENST00000529894.1	2017	12	-33	4517	-33	3223	3prime_fragment	FALSE	canonical	1	20984	junction_1	54696.74747399863	NA	8	NA	TRUE	NA	NA	NA	C	coding	310	933	326	1258	20.0	-3	True	AATAAA	-20
PB.699.1	chr1	-	2070	18	incomplete-splice_match	NBPF14	ENST00000614999.4	10080	66	31069	19831	29037	-18236	internal_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	655	1965	104	2068	60.0	-2302899	True	AAGAAA	-18
PB.10983.1	chr8	+	3254	13	full-splice_match	BLK	ENST00000259089.8	2606	13	-655	7	-655	-1	multi-exon	FALSE	canonical	1	143771	junction_2	21134.087076956715	NA	2	1	TRUE	NA	NA	NA	C	coding	505	1518	1248	2765	10.0	1	True	AATAAA	-14
PB.8755.8	chr4	+	2509	8	full-splice_match	TMEM33	ENST00000513702.5	1092	8	0	-1417	0	955	multi-exon	FALSE	canonical	1	59536	junction_1	186409.95390016388	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	207	896	30.0	-8	True	AATAAA	-25
PB.8755.9	chr4	+	7466	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	9	7	0	-7	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	3	NA	TRUE	NA	NA	NA	C	coding	229	690	411	1100	45.0	-8	True	AATAAA	-24
PB.8755.2	chr4	+	4690	8	full-splice_match	TMEM33	ENST00000513702.5	1092	8	-8	-3590	1	-2056	multi-exon	FALSE	canonical	1	59536	junction_1	186409.95390016388	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	215	904	65.0	-16	True	TTTAAA	-21
PB.8755.3	chr4	+	3362	9	novel_not_in_catalog	TMEM33	novel	7482	7	NA	NA	2	1797	any annotated donor/acceptor	FALSE	canonical	1	788	junction_8	243858.0277014425	NA	2	1	TRUE	NA	NA	NA	C	coding	229	690	262	951	35.0	-15	True	ATTAAA	-14
PB.8755.1	chr4	+	3391	8	novel_not_in_catalog	TMEM33	novel	7482	7	NA	NA	0	1668	intron_retention	FALSE	non_canonical	0	0	junction_7	206045.58903132408	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	420	1109	20.0	-17	True	TTTAAA	-17
PB.8755.6	chr4	+	3351	8	full-splice_match	TMEM33	ENST00000513702.5	1092	8	0	-2259	0	1797	multi-exon	FALSE	canonical	1	59536	junction_1	186409.95390016388	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	207	896	35.0	-8	True	ATTAAA	-14
PB.8755.7	chr4	+	3307	9	novel_not_in_catalog	TMEM33	novel	7482	7	NA	NA	0	1797	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	237382.56902041982	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	207	896	35.0	-8	True	ATTAAA	-14
PB.8755.4	chr4	+	4049	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	3	3430	3	2285	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	417	1106	45.0	-14	True	ATTAAA	-18
PB.8755.5	chr4	+	3511	8	novel_not_in_catalog	TMEM33	novel	7482	7	NA	NA	0	1797	intron_retention	FALSE	non_canonical	0	0	junction_7	206045.58903132408	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	411	1100	35.0	-8	True	ATTAAA	-14
PB.11128.7	chr8	-	4573	17	incomplete-splice_match	RB1CC1	ENST00000025008.9	6635	24	-32	20327	2	15102	3prime_fragment	FALSE	canonical	1	145642	junction_16	81764.57619124785	NA	1	NA	TRUE	NA	NA	NA	C	coding	1339	4017	557	4573	70.0	-30	True	NA	NA
PB.4467.32	chr16	-	7783	50	novel_not_in_catalog	CNOT1	novel	8471	49	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	1	3019	junction_3	303044.9834557214	NA	2	1	TRUE	NA	NA	NA	C	coding	2350	7053	278	7330	30.0	-5	True	AATACA	-9
PB.499.4	chr1	+	3468	1	novel_in_catalog	RPF1	novel	724	3	NA	NA	0	-596	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	163	492	16	507	70.0	0	True	NA	NA
PB.4467.31	chr16	-	7437	48	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_47	296993.3307478482	NA	0	NA	TRUE	NA	NA	NA	C	coding	2148	6447	724	7170	10.0	-22	True	AATACA	-17
PB.11163.1	chr8	-	2571	2	intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1204	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-14
PB.11803.8	chr9	+	3678	19	full-splice_match	STXBP1	ENST00000373299.4	3765	19	68	19	-10	17	multi-exon	FALSE	canonical	1	407873	junction_1	104746.88917801913	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	54	1838	5.0	74	False	AATAAA	-18
PB.7427.1	chr20	-	1984	13	novel_not_in_catalog	UCKL1	novel	1837	15	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_7	212118.6137791385	NA	3	1	TRUE	NA	NA	NA	B	coding	191	576	1271	1846	40.0	-5	True	AATAAA	-12
PB.9009.4	chr4	-	7713	21	full-splice_match	OTUD4	ENST00000447906.7	7273	21	-405	-35	-405	-6	multi-exon	FALSE	canonical	1	5830	junction_20	51016.68042758172	NA	5	NA	TRUE	NA	NA	NA	C	coding	1114	3345	594	3938	10.0	59	False	ATTAAA	-9
PB.11841.2	chr9	+	2513	10	full-splice_match	PTPA	ENST00000393370.6	2737	10	223	1	106	0	multi-exon	FALSE	canonical	1	505906	junction_1	245429.3418472621	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	61	1032	15.0	-9070	False	ATTAAA	-21
PB.11606.1	chr9	+	1399	13	full-splice_match	ANXA1	ENST00000257497.10	1509	13	108	2	0	-2	multi-exon	FALSE	canonical	1	2921819	junction_1	1193814.4569608818	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	75	1115	20.0	0	True	AATAAA	-16
PB.8741.1	chr4	+	4409	37	full-splice_match	WDR19	ENST00000399820.7	4520	37	110	1	10	0	multi-exon	TRUE	canonical	1	43887	junction_1	33854.772958491216	NA	0	NA	TRUE	NA	NA	NA	C	coding	1342	4029	45	4073	15.0	-15	True	AATAAA	-13
PB.8741.2	chr4	+	6031	37	novel_not_in_catalog	WDR19	novel	4520	37	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	22512	junction_32	36731.792234290115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1191	3576	35	3610	20.0	-5	True	AATAAA	-11
PB.9789.2	chr6	+	2335	7	novel_not_in_catalog	HFE	novel	1280	6	NA	NA	-4	-1515	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	27378.249810144305	NA	2	1	TRUE	NA	NA	NA	B	coding	337	1014	54	1067	30.0	0	True	AATAAA	-16
PB.9789.3	chr6	+	2535	7	novel_not_in_catalog	HFE	novel	1280	6	NA	NA	2	-1509	intron_retention	FALSE	non_canonical	0	0	junction_6	22865.845729311364	NA	0	NA	TRUE	NA	NA	NA	B	coding	348	1047	35	1081	25.0	19	True	AATAAA	-22
PB.9789.1	chr6	+	3113	1	novel_in_catalog	HFE	novel	1280	6	NA	NA	11	-2540	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-99	False	NA	NA
PB.8212.3	chr3	-	1352	8	full-splice_match	PSMD6	ENST00000295901.8	1430	8	76	2	-6	-1	multi-exon	FALSE	canonical	1	1236044	junction_6	221351.40807829727	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	66	1235	25.0	-13	True	AATAAA	-22
PB.6890.2	chr2	+	4226	30	full-splice_match	ITGAV	ENST00000261023.7	7030	30	-72	2876	-72	584	multi-exon	FALSE	canonical	1	390989	junction_13	127968.89861501347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	347	3493	25.0	-20	True	ACTAAA	-18
PB.10629.4	chr7	+	2543	11	novel_in_catalog	DTX2	novel	566	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	62	junction_1	88474.46426602424	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	282	2150	15.0	NA	False	AATAAA	-19
PB.6890.1	chr2	+	6830	30	full-splice_match	ITGAV	ENST00000261023.7	7030	30	200	0	185	0	multi-exon	FALSE	canonical	1	390989	junction_13	127968.89861501347	NA	1	NA	TRUE	NA	NA	NA	C	coding	1048	3147	75	3221	10.0	-6173	False	AATAAA	-19
PB.6890.6	chr2	+	6141	30	full-splice_match	ITGAV	ENST00000261023.7	7030	30	-50	939	-50	-935	multi-exon	FALSE	canonical	1	390989	junction_13	127968.89861501347	NA	4	NA	TRUE	NA	NA	NA	C	coding	1048	3147	325	3471	35.0	2	True	AATAAA	-18
PB.6890.7	chr2	+	6398	30	full-splice_match	ITGAV	ENST00000261023.7	7030	30	-34	666	-34	-662	multi-exon	FALSE	canonical	1	390989	junction_13	127968.89861501347	NA	3	1	TRUE	NA	NA	NA	C	coding	1048	3147	309	3455	65.0	-25	True	NA	NA
PB.6890.4	chr2	+	3791	30	full-splice_match	ITGAV	ENST00000261023.7	7030	30	-52	3291	-52	169	multi-exon	FALSE	canonical	1	390989	junction_13	127968.89861501347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	327	3473	20.0	0	True	TATAAA	-21
PB.10629.5	chr7	+	2478	10	full-splice_match	DTX2	ENST00000413936.6	2472	10	-6	0	1	0	multi-exon	FALSE	canonical	1	117	junction_1	89357.74940148597	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	217	2085	15.0	NA	False	AATAAA	-19
PB.1611.30	chr10	-	3480	16	full-splice_match	OGA	ENST00000361464.7	5155	16	-26	1701	21	0	multi-exon	FALSE	canonical	1	409086	junction_15	189164.53566581188	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2751	423	3173	15.0	-3	True	AATAAA	-14
PB.10119.3	chr6	-	4118	24	novel_not_in_catalog	MMS22L	novel	8643	25	NA	NA	-1	6	any annotated donor/acceptor	FALSE	canonical	1	1323	junction_23	28780.29413220935	NA	1	NA	TRUE	NA	NA	NA	B	coding	1017	3054	798	3851	10.0	-3	True	ATTAAA	-12
PB.1611.32	chr10	-	3817	10	full-splice_match	OGA	ENST00000370094.7	3314	10	-46	-457	1	457	multi-exon	FALSE	canonical	1	409086	junction_9	225072.32763094152	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	443	2476	80.0	-23	False	NA	NA
PB.1611.33	chr10	-	3339	10	full-splice_match	OGA	ENST00000370094.7	3314	10	-25	0	22	0	multi-exon	FALSE	canonical	1	409086	junction_9	225072.32763094152	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	422	2455	85.0	-2	True	NA	NA
PB.1611.34	chr10	-	3026	10	full-splice_match	OGA	ENST00000370094.7	3314	10	-26	314	21	-314	multi-exon	FALSE	canonical	1	409086	junction_9	225072.32763094152	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	423	2456	20.0	-3	True	ATTAAA	-23
PB.1611.35	chr10	-	1784	9	incomplete-splice_match	OGA	ENST00000370094.7	3314	10	-28	2245	19	-2245	3prime_fragment	FALSE	canonical	1	409086	junction_8	233395.9084642646	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1359	425	1783	60.0	-5	True	NA	NA
PB.1611.36	chr10	-	2474	4	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	23	-7264	any annotated donor/acceptor	TRUE	canonical	1	28	junction_1	341282.9558045152	NA	10	NA	TRUE	NA	NA	NA	C	coding	221	666	3	668	85.0	-1	True	NA	NA
PB.1611.37	chr10	-	2205	2	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	-23	-11548	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	coding	108	327	420	746	75.0	0	True	NA	NA
PB.1118.9	chr1	+	5283	14	full-splice_match	RPS6KC1	ENST00000366959.4	5454	14	5	166	5	-166	multi-exon	FALSE	canonical	1	6989	junction_1	55975.349222068675	NA	16	1	TRUE	NA	NA	NA	C	coding	1054	3165	146	3310	25.0	2	True	AATAAA	-15
PB.11558.2	chr9	-	2705	1	genic	AL590399.1	novel	NA	NA	NA	NA	-16	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8509.9	chr3	-	2314	12	incomplete-splice_match	GOLIM4	ENST00000309027.4	2100	15	-580	14725	51	-14725	3prime_fragment	FALSE	canonical	1	122250	junction_6	111932.0142232155	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1662	652	2313	50.0	-1	True	AATGAA	-26
PB.8509.8	chr3	-	2319	15	novel_not_in_catalog	GOLIM4	novel	4373	16	NA	NA	315	-508	any annotated donor/acceptor	FALSE	canonical	1	131002	junction_4	134242.7262768065	NA	2	1	TRUE	NA	NA	NA	C	coding	644	1932	388	2319	30.0	-1	True	NA	NA
PB.8509.7	chr3	-	2294	14	incomplete-splice_match	GOLIM4	ENST00000309027.4	2100	15	-378	508	253	-508	3prime_fragment	FALSE	canonical	1	122250	junction_8	136607.44671931906	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1845	450	2294	30.0	-1	True	NA	NA
PB.9315.9	chr5	+	3203	16	novel_in_catalog	TENT2	novel	781	5	NA	NA	6	13	intron_retention	FALSE	canonical	1	25282	junction_2	135638.95876798162	NA	2	1	TRUE	NA	NA	NA	C	coding	484	1455	743	2197	40.0	0	True	AATAAA	-30
PB.8509.5	chr3	-	2192	16	novel_not_in_catalog	GOLIM4	novel	4373	16	NA	NA	554	169	any annotated donor/acceptor	FALSE	canonical	1	2957	junction_15	193852.04485627692	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	250	1989	75.0	0	True	AATATA	-42
PB.8509.4	chr3	-	2405	16	novel_not_in_catalog	GOLIM4	novel	4373	16	NA	NA	-42	176	any annotated donor/acceptor	FALSE	canonical	1	131002	junction_5	137390.3060347741	NA	4	NA	TRUE	NA	NA	NA	C	coding	697	2094	102	2195	80.0	3	True	NA	NA
PB.8509.3	chr3	-	2616	15	full-splice_match	GOLIM4	ENST00000309027.4	2100	15	-340	-176	291	176	multi-exon	FALSE	canonical	1	122250	junction_9	139160.75936059104	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	412	2406	80.0	475	False	NA	NA
PB.8509.1	chr3	-	4328	16	novel_not_in_catalog	GOLIM4	novel	4373	16	NA	NA	51	3	any annotated donor/acceptor	FALSE	canonical	1	131002	junction_5	137390.3060347741	NA	3	NA	TRUE	NA	NA	NA	C	coding	697	2094	640	2733	25.0	-1	True	AATAAA	-30
PB.10629.1	chr7	+	2542	10	novel_in_catalog	DTX2	novel	566	4	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	461	junction_2	89340.78661942584	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	419	2146	15.0	NA	False	AATAAA	-22
PB.10629.2	chr7	+	2348	9	novel_in_catalog	DTX2	novel	566	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	117	junction_1	89276.62321674345	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	228	1955	15.0	NA	False	AATAAA	-19
PB.10848.1	chr7	-	1904	4	novel_not_in_catalog	MKLN1-AS	novel	2279	7	NA	NA	-18	1191	any annotated donor/acceptor	FALSE	canonical	1	316	junction_1	18802.67312556028	NA	1	NA	TRUE	NA	NA	NA	A	coding	114	345	967	1311	15.0	-19	True	NA	NA
PB.10629.3	chr7	+	2643	11	full-splice_match	DTX2	ENST00000430490.6	2623	11	-17	-3	1	0	multi-exon	FALSE	canonical	1	461	junction_2	88498.16868297332	NA	4	NA	TRUE	NA	NA	NA	C	coding	622	1869	382	2250	15.0	NA	False	AATAAA	-19
PB.7789.4	chr22	+	4492	7	full-splice_match	APOBEC3F	ENST00000308521.9	2694	7	260	-2058	7	2058	multi-exon	FALSE	canonical	1	8030	junction_1	28318.664569502565	NA	4	NA	TRUE	NA	NA	NA	C	coding	373	1122	98	1219	30.0	-10	True	NA	NA
PB.7789.5	chr22	+	1984	6	novel_in_catalog	APOBEC3F	novel	570	3	NA	NA	7	-296	no_combination_of_known_junctions	FALSE	canonical	1	2590	junction_1	32337.3254577431	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	145	1065	75.0	-10	True	NA	NA
PB.2230.8	chr11	+	3121	12	incomplete-splice_match	AMOTL1	ENST00000433060.2	8970	13	-31	7095	-2	2893	3prime_fragment	FALSE	canonical	1	132608	junction_1	43566.620783719234	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	173	2959	25.0	-23	True	AATAAA	-15
PB.7789.1	chr22	+	2014	7	full-splice_match	APOBEC3F	ENST00000308521.9	2694	7	215	465	-38	-465	multi-exon	FALSE	canonical	1	8030	junction_1	28318.664569502565	NA	5	NA	TRUE	NA	NA	NA	C	coding	373	1122	143	1264	85.0	-55	False	NA	NA
PB.7789.2	chr22	+	2187	7	full-splice_match	APOBEC3F	ENST00000308521.9	2694	7	257	250	4	-250	multi-exon	FALSE	canonical	1	8030	junction_1	28318.664569502565	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	101	1222	40.0	-13	False	NA	NA
PB.7789.3	chr22	+	2428	7	full-splice_match	APOBEC3F	ENST00000308521.9	2694	7	265	1	12	-1	multi-exon	FALSE	canonical	1	8030	junction_1	28318.664569502565	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	93	1214	25.0	-5	True	NA	NA
PB.2230.2	chr11	+	3217	12	full-splice_match	AMOTL1	ENST00000317829.12	8844	12	6	5621	6	4362	multi-exon	FALSE	canonical	1	52675	junction_1	63268.83770999396	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	165	2885	55.0	-15	True	NA	NA
PB.2230.3	chr11	+	5458	11	incomplete-splice_match	AMOTL1	ENST00000433060.2	8970	13	-53	7809	-24	2179	3prime_fragment	FALSE	canonical	1	132608	junction_1	44354.2929445392	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	195	2711	95.0	2	True	NA	NA
PB.11793.3	chr9	+	2104	8	novel_not_in_catalog	MVB12B	novel	4819	10	NA	NA	-11	8053	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	52461.267289617135	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	187	894	35.0	-6	True	NA	NA
PB.2230.1	chr11	+	3253	13	full-splice_match	AMOTL1	ENST00000433060.2	8970	13	111	5606	111	4382	multi-exon	FALSE	canonical	1	132608	junction_1	45029.73191095215	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	31	2901	25.0	49	False	TATAAA	-18
PB.2230.6	chr11	+	8460	13	full-splice_match	AMOTL1	ENST00000433060.2	8970	13	-34	544	-5	-539	multi-exon	FALSE	canonical	1	132608	junction_1	45029.73191095215	NA	1	NA	TRUE	NA	NA	NA	C	coding	956	2871	176	3046	20.0	-26	True	AATATA	-19
PB.2230.7	chr11	+	8764	12	full-splice_match	AMOTL1	ENST00000317829.12	8844	12	-4	84	-4	-84	multi-exon	FALSE	canonical	1	52675	junction_1	63268.83770999396	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	175	2895	25.0	-25	True	AATAAA	-14
PB.2230.4	chr11	+	7277	12	full-splice_match	AMOTL1	ENST00000317829.12	8844	12	-20	1587	-20	-1587	multi-exon	FALSE	canonical	1	52675	junction_1	63268.83770999396	NA	9	NA	TRUE	NA	NA	NA	C	coding	906	2721	191	2911	30.0	6	True	ATTAAA	-21
PB.2230.5	chr11	+	8927	13	full-splice_match	AMOTL1	ENST00000433060.2	8970	13	-43	86	-14	-81	multi-exon	FALSE	canonical	1	132608	junction_1	45029.73191095215	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	185	3055	10.0	-105	False	AATAAA	-17
PB.3528.24	chr14	+	2332	8	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	-6	intron_retention	FALSE	canonical	1	19591	junction_7	1736500.026162043	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1730	2167	25.0	0	True	AATAAA	-8
PB.3691.2	chr14	-	2732	2	full-splice_match	ATP5MPL	ENST00000554528.1	526	2	38	-2244	1	0	multi-exon	FALSE	canonical	1	3186271	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-17
PB.2791.1	chr12	-	5471	10	full-splice_match	KITLG	ENST00000644744.1	5441	10	-29	-1	-29	1	multi-exon	FALSE	canonical	1	96251	junction_1	34207.386096507806	NA	6	NA	TRUE	NA	NA	NA	C	coding	273	822	223	1044	30.0	-30	False	AATAAA	-20
PB.2791.2	chr12	-	5369	9	full-splice_match	KITLG	ENST00000347404.10	5737	9	367	1	-13	-1	multi-exon	FALSE	canonical	1	26790	junction_4	56655.86993074394	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	207	944	30.0	-14	False	AATAAA	-18
PB.3691.1	chr14	-	1889	3	full-splice_match	ATP5MPL	ENST00000553430.5	1659	3	-9	-221	0	1	multi-exon	FALSE	canonical	1	1339640	junction_1	923315.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	77	234	70	303	10.0	-13	True	AATAAA	-28
PB.3528.26	chr14	+	1121	9	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	19591	junction_8	1648619.5017028593	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	133	951	5.0	1	True	AATAAA	-13
PB.10594.10	chr7	-	1738	7	incomplete-splice_match	BAZ1B	ENST00000404251.1	5428	19	248	36255	242	-15356	3prime_fragment	FALSE	canonical	1	274354	junction_6	99161.94280905687	NA	2	NA	TRUE	NA	NA	NA	C	coding	547	1641	98	1738	50.0	-1	True	AAAAAG	-43
PB.9340.4	chr5	-	3041	1	full-splice_match	MBLAC2	ENST00000514906.1	1936	1	-358	-747	32	747	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	199	600	445	1044	40.0	1	True	ATTAAA	-21
PB.12133.8	chrX	+	3188	11	novel_in_catalog	NONO	novel	2882	10	NA	NA	3	0	intron_retention	FALSE	canonical	1	242163	junction_10	532786.6515197242	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	153	1325	10.0	1	True	ATTAAA	-19
PB.10293.12	chr6	+	2634	3	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	10012	74622	no_combination_of_known_junctions	FALSE	canonical	1	10236	junction_2	8341.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	158	1222	20.0	NA	False	AATAAA	-11
PB.10293.11	chr6	+	2693	5	incomplete-splice_match	SCAF8	ENST00000367178.7	5057	20	88950	-3	113	3	5prime_fragment	FALSE	canonical	1	282303	junction_3	29279.98760672552	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	127	2025	20.0	NA	False	AATAAA	-21
PB.12133.4	chrX	+	2773	13	full-splice_match	NONO	ENST00000373856.7	1921	13	45	-897	2	0	multi-exon	FALSE	canonical	1	111266	junction_3	729793.5789626245	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	268	1683	10.0	0	True	ATTAAA	-19
PB.12133.5	chrX	+	2607	9	novel_in_catalog	NONO	novel	2882	10	NA	NA	2	-2	intron_retention	FALSE	canonical	1	242163	junction_8	626591.6352551716	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	97	1128	25.0	0	True	ATTAAA	-19
PB.12133.6	chrX	+	3562	10	novel_in_catalog	NONO	novel	2882	10	NA	NA	3	0	intron_retention	FALSE	canonical	1	242163	junction_9	561127.902430541	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	153	1184	10.0	1	True	ATTAAA	-19
PB.12133.7	chrX	+	3302	12	novel_in_catalog	NONO	novel	2882	10	NA	NA	3	0	intron_retention	FALSE	canonical	1	111266	junction_3	612304.9275008206	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	267	1439	10.0	1	True	ATTAAA	-19
PB.12133.1	chrX	+	2691	10	novel_in_catalog	NONO	novel	2882	10	NA	NA	-16	7	intron_retention	FALSE	canonical	1	242163	junction_9	561127.902430541	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	172	1203	15.0	-18	True	ATTAAA	-28
PB.12133.2	chrX	+	3136	10	novel_in_catalog	NONO	novel	2882	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	242163	junction_9	590858.7913375866	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	101	1273	10.0	-4	True	ATTAAA	-19
PB.12133.3	chrX	+	3892	9	novel_in_catalog	NONO	novel	2882	10	NA	NA	2	0	intron_retention	FALSE	canonical	1	242163	junction_8	509733.4029600516	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	154	1140	10.0	0	True	ATTAAA	-19
PB.11586.1	chr9	+	5829	1	intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	NA	False	AATAAA	-17
PB.11586.3	chr9	+	2976	1	intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.11586.2	chr9	+	1102	2	intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.3528.22	chr14	+	2502	7	full-splice_match	SRSF5	ENST00000556184.5	2443	7	-30	-29	-15	17	multi-exon	FALSE	canonical	1	544887	junction_1	1600539.914099449	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	1855	2292	15.0	0	True	ATTAAA	-17
PB.2924.10	chr12	+	5795	28	novel_in_catalog	TPCN1	novel	526	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	948	junction_1	94834.95347922837	NA	7	NA	TRUE	NA	NA	NA	C	coding	690	2073	100	2172	20.0	1	True	ACTAAA	-17
PB.3528.23	chr14	+	2448	8	full-splice_match	SRSF5	ENST00000555547.5	2057	8	-44	-347	-15	-3	multi-exon	FALSE	canonical	1	49004	junction_5	1728098.4604015253	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1471	1908	10.0	0	True	AATAAA	-11
PB.3685.1	chr14	-	4934	2	full-splice_match	BAG5	ENST00000299204.4	4848	2	-87	1	-70	0	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	321	1658	10.0	-220	False	AATAAA	-32
PB.3685.3	chr14	-	4089	2	full-splice_match	BAG5	ENST00000299204.4	4848	2	149	610	149	-609	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	85	1422	25.0	-10	True	AGTAAA	-12
PB.3685.2	chr14	-	4302	2	full-splice_match	BAG5	ENST00000299204.4	4848	2	121	425	121	-424	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	113	1450	30.0	-12	False	AATAAA	-20
PB.3685.5	chr14	-	2224	2	full-splice_match	BAG5	ENST00000557666.1	878	2	171	-1517	154	605	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	74	1417	85.0	-5	True	AGTAAA	-43
PB.3685.4	chr14	-	4244	2	full-splice_match	BAG5	ENST00000445922.2	4867	2	14	609	-6	-609	multi-exon	TRUE	canonical	1	15417	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	240	1577	25.0	-39	True	AGTAAA	-12
PB.3685.7	chr14	-	3490	1	novel_in_catalog	BAG5	novel	4848	2	NA	NA	158	452	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	445	1338	1499	2836	45.0	-1	True	AAGAAA	-20
PB.3685.6	chr14	-	2139	2	full-splice_match	BAG5	ENST00000557666.1	878	2	149	-1410	132	498	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	96	1439	35.0	-1	True	ATTAAA	-22
PB.3685.9	chr14	-	1641	2	full-splice_match	BAG5	ENST00000557666.1	878	2	153	-916	136	4	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	98	1435	10.0	3	True	NA	NA
PB.3685.8	chr14	-	1777	2	full-splice_match	BAG5	ENST00000557666.1	878	2	176	-1075	159	163	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	75	1412	55.0	0	True	NA	NA
PB.8520.10	chr3	+	6982	26	full-splice_match	FNDC3B	ENST00000336824.8	7904	26	-43	965	-43	-965	multi-exon	FALSE	canonical	1	64121	junction_1	85473.48032023967	NA	1	NA	TRUE	NA	NA	NA	C	coding	1200	3603	155	3757	25.0	-20	True	AATAAA	-22
PB.8520.11	chr3	+	3972	27	novel_not_in_catalog	FNDC3B	novel	946	4	NA	NA	-21	194	any annotated donor/acceptor	FALSE	canonical	1	4705	junction_1	112334.85677386093	NA	0	NA	TRUE	NA	NA	NA	C	coding	1200	3603	170	3772	85.0	2	True	NA	NA
PB.7471.10	chr21	+	3382	1	novel_in_catalog	MIR155HG	novel	1600	4	NA	NA	2895	-6983	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-9242	False	NA	NA
PB.8674.1	chr4	-	4870	9	novel_not_in_catalog	LRPAP1	novel	10598	8	NA	NA	-1	3799	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	704372.3254234493	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	10	1083	10.0	0	True	NA	NA
PB.8520.14	chr3	+	3668	24	novel_in_catalog	FNDC3B	novel	946	4	NA	NA	-3	195	no_combination_of_known_junctions	FALSE	canonical	1	2767	junction_1	91235.61841036711	NA	0	NA	TRUE	NA	NA	NA	C	coding	1135	3408	60	3467	90.0	-7	True	NA	NA
PB.8520.15	chr3	+	3021	20	novel_not_in_catalog	FNDC3B	novel	5083	26	NA	NA	-17124	195	any annotated donor/acceptor	FALSE	canonical	1	85	junction_1	100732.02535696003	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	277	2820	90.0	NA	False	NA	NA
PB.4217.5	chr16	+	2202	12	novel_not_in_catalog	DNAJA3	novel	2294	9	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	69	junction_11	181743.61769952858	NA	1	1	TRUE	NA	NA	NA	C	coding	453	1362	25	1386	20.0	-10	True	AAAAAG	-14
PB.4217.4	chr16	+	2473	10	novel_in_catalog	DNAJA3	novel	2294	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	3024	junction_8	194269.6691980531	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	25	1539	20.0	-10	True	AAAAAG	-13
PB.4217.7	chr16	+	2309	13	novel_not_in_catalog	DNAJA3	novel	2294	9	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	69	junction_12	209754.00421861568	NA	1	1	TRUE	NA	NA	NA	C	coding	480	1443	15	1457	20.0	0	True	AAAAAG	-14
PB.4217.6	chr16	+	3176	10	novel_in_catalog	DNAJA3	novel	2294	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	405600	junction_1	85101.05724126022	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	15	908	20.0	0	True	AAAAAG	-14
PB.4217.1	chr16	+	2509	11	full-splice_match	DNAJA3	ENST00000355296.8	2591	11	8	74	0	-71	multi-exon	FALSE	canonical	1	405600	junction_1	84103.75734180964	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	15	1376	45.0	0	True	AATAAA	-18
PB.6553.1	chr2	-	2215	2	novel_not_in_catalog	EGR4	novel	2377	2	NA	NA	154	0	any annotated donor/acceptor	FALSE	canonical	1	5292	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	485	1458	231	1688	30.0	0	True	ATTAAA	-20
PB.4217.3	chr16	+	2647	12	full-splice_match	DNAJA3	ENST00000262375.10	2763	12	53	63	-2	-60	multi-exon	FALSE	canonical	1	197083	junction_10	162496.43158487568	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	25	1467	40.0	-10	True	AATAAA	-29
PB.7350.3	chr20	+	2303	5	full-splice_match	RNF114	ENST00000623528.3	624	5	51	-1730	10	4	multi-exon	FALSE	canonical	1	23738	junction_1	580378.8666196848	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	227	562	25.0	-12	True	AATAAA	-16
PB.1831.23	chr11	-	2138	15	novel_in_catalog	COPB1	novel	3481	22	NA	NA	0	4669	combination_of_known_junctions	FALSE	canonical	1	148762	junction_14	313088.2072302273	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	179	2137	50.0	-19	True	NA	NA
PB.1831.22	chr11	-	2176	15	incomplete-splice_match	COPB1	ENST00000439561.6	3382	22	30	11791	-3	4669	3prime_fragment	FALSE	canonical	1	431700	junction_14	262869.8634285099	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	217	2175	50.0	-22	True	NA	NA
PB.1831.21	chr11	-	2266	15	incomplete-splice_match	COPB1	ENST00000249923.7	3481	22	-5	11835	-5	4669	3prime_fragment	FALSE	canonical	1	48461	junction_14	332907.12260445184	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	307	2265	50.0	-14	True	NA	NA
PB.1831.20	chr11	-	2558	18	novel_in_catalog	COPB1	novel	3481	22	NA	NA	3	-4922	combination_of_known_junctions	FALSE	canonical	1	148762	junction_17	339536.42939285794	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2382	176	2557	40.0	-16	True	ATTAAA	-26
PB.4217.9	chr16	+	2078	12	novel_not_in_catalog	DNAJA3	novel	2294	9	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	181761.41876419637	NA	5	1	TRUE	NA	NA	NA	C	coding	453	1362	15	1376	20.0	0	True	AAAAAG	-14
PB.4217.8	chr16	+	2193	13	novel_not_in_catalog	DNAJA3	novel	2294	9	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	209766.79555136673	NA	1	1	TRUE	NA	NA	NA	C	coding	480	1443	14	1456	20.0	1	True	AAAAAG	-13
PB.7350.1	chr20	+	2329	6	full-splice_match	RNF114	ENST00000244061.5	2503	6	165	9	106	5	multi-exon	FALSE	canonical	1	643964	junction_1	300850.48777597153	NA	2	1	TRUE	NA	NA	NA	C	coding	111	336	252	587	25.0	-422	False	AATAAA	-17
PB.10831.1	chr7	-	4101	23	full-splice_match	TNPO3	ENST00000265388.9	4153	23	13	39	13	-39	multi-exon	TRUE	canonical	1	351805	junction_19	102957.83144413907	NA	1	NA	TRUE	NA	NA	NA	C	coding	923	2772	132	2903	75.0	-2	True	NA	NA
PB.7350.7	chr20	+	1411	7	novel_not_in_catalog	RNF114	novel	624	5	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	5304	junction_6	497366.48237148364	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	16	717	15.0	-1	True	AATAAA	-24
PB.11096.2	chr8	-	3377	17	novel_in_catalog	FGFR1	novel	6216	22	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	1	99420	junction_9	252020.89676979635	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	281	2476	35.0	-15	True	AATAAA	-20
PB.747.20	chr1	-	2357	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	6497	junction_9	151989.38344335105	NA	3	1	TRUE	NA	NA	NA	C	coding	616	1851	282	2132	15.0	-46	True	AATAAA	-15
PB.7350.4	chr20	+	791	6	full-splice_match	RNF114	ENST00000244061.5	2503	6	42	1670	-9	70	multi-exon	FALSE	canonical	1	643964	junction_1	300850.48777597153	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	24	710	30.0	-9	True	ATTAAA	-26
PB.9273.1	chr5	+	1585	16	novel_in_catalog	GTF2H2C	novel	832	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	1693	junction_14	66201.86751229572	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	69	1256	35.0	NA	False	ATTAAA	-16
PB.7350.5	chr20	+	2337	5	full-splice_match	RNF114	ENST00000625177.3	580	5	-2	-1755	-2	5	multi-exon	FALSE	canonical	1	4100	junction_4	541779.9762935942	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	17	595	25.0	-2	True	AATAAA	-17
PB.499.3	chr1	+	5182	1	genic	RPF1	novel	NA	NA	NA	NA	-7	1103	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	163	492	31	522	65.0	-15	True	NA	NA
PB.4941.8	chr17	-	3563	10	full-splice_match	PIP4K2B	ENST00000619039.4	5734	10	313	1858	-70	-1858	multi-exon	FALSE	canonical	1	322646	junction_8	71028.83185556013	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	169	1419	5.0	-45	True	NA	NA
PB.421.11	chr1	-	2162	14	novel_not_in_catalog	NDC1	novel	5134	18	NA	NA	173	-25354	any annotated donor/acceptor	TRUE	canonical	1	4142	junction_1	145782.32557578446	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	278	1666	15.0	5	True	AAAACA	-11
PB.421.10	chr1	-	2589	18	full-splice_match	NDC1	ENST00000371429.3	5134	18	288	2257	-109	-2257	multi-exon	FALSE	canonical	1	145265	junction_17	87832.13693369357	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	6	2336	35.0	4	True	AATAAA	-21
PB.9891.1	chr6	-	1547	6	full-splice_match	DXO	ENST00000375356.7	1533	6	10	-24	10	-3	multi-exon	TRUE	canonical	1	103272	junction_4	66503.0637628072	NA	0	NA	TRUE	NA	NA	NA	A	coding	396	1191	300	1490	15.0	-5	True	AATAAA	-11
PB.4941.3	chr17	-	5288	9	novel_in_catalog	PIP4K2B	novel	5734	10	NA	NA	-36	-2	no_combination_of_known_junctions	FALSE	canonical	1	35956	junction_7	152394.72280151304	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	515	1288	15.0	-11	True	AATAAA	-20
PB.8634.1	chr3	-	4476	8	novel_not_in_catalog	AC132008.2	novel	956	6	NA	NA	14	32	intron_retention	FALSE	non_canonical	0	0	junction_1	97574.64826166556	NA	0	NA	TRUE	NA	NA	NA	B	coding	150	453	389	841	10.0	-12	True	NA	NA
PB.4941.1	chr17	-	5352	10	full-splice_match	PIP4K2B	ENST00000619039.4	5734	10	341	41	-42	-41	multi-exon	FALSE	canonical	1	322646	junction_8	71028.83185556013	NA	2	NA	TRUE	NA	NA	NA	C	coding	416	1251	141	1391	65.0	-17	True	NA	NA
PB.8634.3	chr3	-	3380	8	novel_not_in_catalog	AC132008.2	novel	956	6	NA	NA	12	-1066	intron_retention	FALSE	non_canonical	0	0	junction_1	97574.64826166556	NA	0	NA	TRUE	NA	NA	NA	B	coding	150	453	391	843	35.0	-14	True	AAAACA	-29
PB.4941.7	chr17	-	3791	10	full-splice_match	PIP4K2B	ENST00000619039.4	5734	10	333	1610	-50	-1610	multi-exon	FALSE	canonical	1	322646	junction_8	71028.83185556013	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	149	1399	20.0	-25	True	TTTAAA	-19
PB.4941.6	chr17	-	5847	9	novel_in_catalog	PIP4K2B	novel	5734	10	NA	NA	-30	-8	intron_retention	TRUE	canonical	1	322646	junction_7	74875.99351500704	NA	3	NA	TRUE	NA	NA	NA	C	coding	377	1134	129	1262	15.0	-5	True	AATAAA	-14
PB.434.1	chr1	+	1750	1	antisense	novelGene_USP24_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8634.7	chr3	-	2569	4	novel_in_catalog	AC132008.2	novel	1286	10	NA	NA	14	543	intron_retention	FALSE	canonical	1	340	junction_2	119551.67694162871	NA	0	NA	TRUE	NA	NA	NA	B	coding	187	564	900	1463	90.0	-12	True	NA	NA
PB.10271.1	chr6	-	3178	2	novel_not_in_catalog	ZC3H12D	novel	5791	6	NA	NA	726	29	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-6160	False	AATAAA	-15
PB.10831.8	chr7	-	3076	22	novel_in_catalog	TNPO3	novel	4153	23	NA	NA	6	-19	no_combination_of_known_junctions	FALSE	canonical	1	6141	junction_18	145981.09343594065	NA	2	NA	TRUE	NA	NA	NA	C	coding	875	2628	139	2766	85.0	-9	True	NA	NA
PB.9160.1	chr5	-	2242	1	antisense	novelGene_PURPL_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1827.5	chr11	+	5294	17	novel_in_catalog	ARNTL	novel	571	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	44117	junction_1	35548.38010104812	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	3219	4787	40.0	-37	True	AATAAA	-18
PB.1827.4	chr11	+	2857	21	novel_in_catalog	ARNTL	novel	571	3	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	23857	junction_6	47669.47405969044	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	613	2346	40.0	-37	True	AATAAA	-22
PB.1827.7	chr11	+	3192	1	full-splice_match	RN7SKP151	ENST00000410230.1	316	1	-2574	-302	-2574	302	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.1827.6	chr11	+	2727	19	novel_not_in_catalog	ARNTL	novel	571	3	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	10337	junction_15	44293.44480873768	NA	5	1	TRUE	NA	NA	NA	C	coding	630	1893	329	2221	35.0	-26	True	AATAAA	-17
PB.1827.1	chr11	+	2788	20	full-splice_match	ARNTL	ENST00000403290.5	2746	20	-44	2	-6	1	multi-exon	TRUE	canonical	1	24590	junction_2	41434.36397277331	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	400	2280	40.0	-42	True	AATAAA	-19
PB.1827.3	chr11	+	2719	19	novel_in_catalog	ARNTL	novel	571	3	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	44117	junction_1	34570.14448614888	NA	8	1	TRUE	NA	NA	NA	C	coding	626	1881	331	2211	40.0	-28	True	AATAAA	-19
PB.1827.2	chr11	+	2845	20	full-splice_match	ARNTL	ENST00000403510.7	2745	20	-100	0	-51	0	multi-exon	FALSE	canonical	1	23857	junction_5	45246.6252778703	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	608	2338	40.0	-87	False	AATAAA	-18
PB.9525.4	chr5	+	4797	4	full-splice_match	PCDHGA12	ENST00000252085.3	4747	4	-58	8	-29	-8	multi-exon	FALSE	canonical	1	29524	junction_1	306223.9684809506	NA	2	NA	TRUE	NA	NA	NA	A	coding	932	2799	201	2999	35.0	-1482	False	AATAAA	-13
PB.19.2	chr1	+	2216	2	full-splice_match	AL391244.1	ENST00000418833.2	2196	2	-6	-14	2	-6	multi-exon	FALSE	canonical	1	179720	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	TATAAA	-14
PB.1047.2	chr1	+	2605	2	full-splice_match	BTG2	ENST00000290551.4	2712	2	104	3	104	-3	multi-exon	FALSE	canonical	1	1257292	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	85	258	187	444	30.0	-3461	False	AATAAA	-14
PB.1047.1	chr1	+	4123	1	genic	BTG2	novel	NA	NA	NA	NA	7	18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	158	477	110	586	30.0	-3603	False	AATAAA	-35
PB.8629.10	chr3	-	4105	3	novel_in_catalog	NCBP2	novel	771	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	44293	junction_2	556065.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-8	True	AATAAA	-15
PB.10291.19	chr6	-	4018	6	novel_not_in_catalog	IPCEF1	novel	6689	12	NA	NA	19	2552	any annotated donor/acceptor	FALSE	canonical	1	4878	junction_4	31673.675412872435	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	996	1559	25.0	850	False	AATAAA	-23
PB.7186.9	chr20	+	2850	5	novel_not_in_catalog	MGME1	novel	2336	5	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	21651	junction_2	127234.33726887565	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	766	1839	15.0	1	True	AATAAA	-20
PB.10884.9	chr7	-	3198	14	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3161	junction_12	60787.99069673833	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	410	1540	25.0	4	True	AATAAA	-16
PB.8773.19	chr4	+	4217	12	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	21	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	120236.3029177912	NA	4	1	TRUE	NA	NA	NA	C	coding	232	699	263	961	20.0	21	True	AATAAA	-28
PB.7186.8	chr20	+	1794	3	full-splice_match	MGME1	ENST00000377704.4	1781	3	-15	2	-15	-2	multi-exon	FALSE	canonical	1	10303	junction_2	82036.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	108	860	15.0	0	True	AATAAA	-20
PB.5342.1	chr17	+	2377	1	genic	AC132872.2	novel	NA	NA	NA	NA	-1296	-2045	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	146	441	595	1035	15.0	-5003	False	NA	NA
PB.8773.15	chr4	+	2190	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	90	2032	0	511	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	91	969	15.0	0	True	AATAAA	-16
PB.8773.16	chr4	+	1966	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	90	2256	0	287	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	91	969	10.0	0	True	AAAACA	-16
PB.8773.17	chr4	+	2854	12	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	2	511	intron_retention	FALSE	canonical	1	3174	junction_9	127561.35206264313	NA	3	NA	TRUE	NA	NA	NA	C	coding	143	432	89	520	15.0	2	True	AATAAA	-16
PB.8773.10	chr4	+	4341	12	novel_in_catalog	DCUN1D4	novel	2293	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4072	junction_1	116369.80281146894	NA	2	NA	TRUE	NA	NA	NA	C	coding	294	885	206	1090	35.0	0	True	AATAAA	-23
PB.10291.14	chr6	-	2973	9	novel_not_in_catalog	IPCEF1	novel	498	2	NA	NA	16	0	any annotated donor/acceptor	FALSE	canonical	1	4878	junction_6	25623.021933104905	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	1137	2069	90.0	-13	True	NA	NA
PB.2679.1	chr12	+	1038	4	full-splice_match	IL23A	ENST00000228534.5	1046	4	7	1	7	-1	multi-exon	FALSE	canonical	1	37188	junction_1	3805.5277630777514	NA	1	NA	TRUE	NA	NA	NA	A	coding	189	570	164	733	30.0	-2	True	AATAAA	-18
PB.8773.13	chr4	+	3342	11	novel_in_catalog	DCUN1D4	novel	2293	9	NA	NA	0	1057	intron_retention	FALSE	canonical	1	19051	junction_6	100850.38859022805	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	91	522	40.0	0	True	AATAAA	-23
PB.4874.2	chr17	-	9364	15	full-splice_match	SSH2	ENST00000269033.7	9327	15	-40	3	-19	-3	multi-exon	FALSE	canonical	1	28708	junction_14	47712.73389697418	NA	1	NA	TRUE	NA	NA	NA	C	coding	1423	4272	193	4464	35.0	35	True	AATAAA	-18
PB.4874.3	chr17	-	3418	1	incomplete-splice_match	SSH2	ENST00000269033.7	9327	15	300792	5	2124	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	100	303	393	695	30.0	-3085	False	AATAAA	-16
PB.5586.5	chr19	-	5080	32	full-splice_match	AP3D1	ENST00000643116.2	5065	32	-22	7	-22	0	multi-exon	FALSE	canonical	1	104315	junction_9	258807.82949826404	NA	1	NA	TRUE	NA	NA	NA	C	coding	1215	3648	255	3902	15.0	-38	False	AATAAA	-15
PB.4874.1	chr17	-	9311	14	novel_in_catalog	SSH2	novel	9327	15	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	89490	junction_13	27848.246545036476	NA	1	NA	TRUE	NA	NA	NA	C	coding	1406	4221	192	4412	35.0	82	False	AATAAA	-17
PB.4874.6	chr17	-	4542	14	novel_in_catalog	SSH2	novel	9327	15	NA	NA	-17	0	intron_retention	FALSE	canonical	1	89490	junction_13	27848.246545036476	NA	0	NA	TRUE	NA	NA	NA	C	coding	1430	4293	158	4450	30.0	-3	True	NA	NA
PB.4437.3	chr16	-	3232	14	novel_in_catalog	AMFR	novel	3600	14	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	1781	junction_13	247153.12730358244	NA	2	NA	TRUE	NA	NA	NA	B	coding	548	1647	130	1776	5.0	7013	False	AATAAA	-12
PB.11368.1	chr8	+	4724	2	incomplete-splice_match	ZFP41	ENST00000520584.5	3284	3	102	5	-5	-5	intron_retention	FALSE	canonical	1	23008	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	198	597	982	1578	20.0	-16	True	NA	NA
PB.8489.29	chr3	-	7467	6	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-12	intron_retention	FALSE	canonical	1	340686	junction_3	320657.22164105397	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	75.0	-1	True	AAGAAA	-45
PB.10777.15	chr7	+	2289	8	full-splice_match	BCAP29	ENST00000005259.8	4572	8	262	2021	-7	403	multi-exon	FALSE	canonical	1	279651	junction_1	114728.25877165359	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	78	803	60.0	-7	True	NA	NA
PB.5586.8	chr19	-	2631	22	incomplete-splice_match	AP3D1	ENST00000355272.10	5034	32	111	13197	111	1156	3prime_fragment	FALSE	canonical	1	465081	junction_7	225329.48554526822	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	97	2631	75.0	120	False	NA	NA
PB.3147.4	chr13	-	3511	1	novel_in_catalog	LINC01055	novel	1721	4	NA	NA	16	-17474	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	NA	NA
PB.3147.5	chr13	-	3219	2	novel_not_in_catalog	LINC01055	novel	1721	4	NA	NA	16	-17474	any annotated donor/acceptor	FALSE	canonical	1	3264	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	NA	NA
PB.3147.6	chr13	-	3067	2	novel_not_in_catalog	LINC01055	novel	1721	4	NA	NA	35	-17607	any annotated donor/acceptor	FALSE	canonical	1	3264	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	18	True	NA	NA
PB.11131.4	chr8	-	2635	10	novel_not_in_catalog	TCEA1	novel	2718	9	NA	NA	3	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66425.393232549	NA	86	5	TRUE	NA	NA	NA	C	coding	313	942	183	1124	30.0	-21	True	AATAAA	-20
PB.3147.1	chr13	-	2470	2	novel_in_catalog	LINC01055	novel	1721	4	NA	NA	16	1020	no_combination_of_known_junctions	FALSE	canonical	1	516	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	1126	1431	35.0	-1	True	NA	NA
PB.3147.2	chr13	-	2740	4	full-splice_match	LINC01055	ENST00000435067.2	1721	4	-40	-979	-40	979	multi-exon	FALSE	canonical	1	953	junction_2	5976.487058093204	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	260	577	80.0	469	False	NA	NA
PB.3147.3	chr13	-	4983	1	novel_in_catalog	LINC01055	novel	1721	4	NA	NA	44	-15974	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	27	True	NA	NA
PB.8920.3	chr4	+	5521	6	novel_in_catalog	SGMS2	novel	582	3	NA	NA	50	-20	combination_of_known_junctions	FALSE	canonical	1	2162	junction_2	44330.404110948504	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	469	1047	45.0	0	True	AATAAA	-14
PB.1209.1	chr1	+	639	3	full-splice_match	COA6	ENST00000619305.1	697	3	48	10	48	-7	multi-exon	TRUE	canonical	1	726181	junction_2	1258.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	79	240	180	419	30.0	0	True	AGTAAA	-10
PB.9273.5	chr5	+	1955	16	novel_in_catalog	GTF2H2C	novel	832	8	NA	NA	2	40	combination_of_known_junctions	FALSE	canonical	1	1693	junction_14	66201.86751229572	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	66	1253	75.0	NA	False	NA	NA
PB.10184.8	chr6	+	3390	5	full-splice_match	NUS1	ENST00000368494.3	4676	5	464	822	464	-822	multi-exon	FALSE	canonical	1	161	junction_1	17572.304672409933	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	6	587	35.0	497	False	AATAAA	-21
PB.8682.1	chr4	-	2551	13	full-splice_match	JAKMIP1	ENST00000282924.9	2585	13	32	2	-4	0	multi-exon	FALSE	canonical	1	30749	junction_12	23660.94198779922	NA	1	NA	TRUE	NA	NA	NA	A	coding	626	1881	455	2335	20.0	10	False	AATAAA	-16
PB.6805.7	chr2	+	3143	4	incomplete-splice_match	TANK	ENST00000259075.6	2152	8	55	28728	-3	2480	3prime_fragment	FALSE	canonical	1	152487	junction_1	204216.71676105916	NA	1	1	TRUE	NA	NA	NA	C	coding	119	360	151	510	10.0	0	True	AATAAA	-24
PB.1254.1	chr1	-	2931	3	novel_not_in_catalog	AC138089.1	novel	967	2	NA	NA	-157329	1460	intron_retention	FALSE	canonical	1	287	junction_2	2824.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ATTAAA	-17
PB.10969.8	chr8	+	3732	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	31	-846	-16	846	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	42	1874	15.0	0	True	AATAAA	-25
PB.9246.13	chr5	+	4818	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-7	1912	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	2	NA	TRUE	NA	NA	NA	C	coding	687	2064	29	2092	55.0	1	True	NA	NA
PB.1726.1	chr10	-	1284	8	full-splice_match	ECHS1	ENST00000368547.3	1617	8	331	2	331	-2	multi-exon	FALSE	canonical	1	1249642	junction_7	403742.88642225193	NA	0	NA	TRUE	NA	NA	NA	A	coding	290	873	26	898	15.0	-18	True	ATTAAA	-23
PB.193.3	chr1	+	3495	11	novel_in_catalog	CEP85	novel	2663	13	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	159	junction_4	79049.13295343598	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	139	1983	20.0	1	True	AATAAA	-12
PB.2803.18	chr12	+	3636	6	novel_not_in_catalog	NUDT4	novel	9753	5	NA	NA	31	-46	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1399.4483770400393	NA	2	NA	TRUE	NA	NA	NA	C	coding	180	543	218	760	70.0	2	True	NA	NA
PB.2803.19	chr12	+	2531	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	31	2277	31	833	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	400	939	65.0	2	True	NA	NA
PB.2803.14	chr12	+	1690	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	29	3120	29	-10	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	402	941	30.0	0	True	AGTAAA	-20
PB.2803.15	chr12	+	3804	4	novel_in_catalog	NUDT4	novel	9753	5	NA	NA	30	-16	no_combination_of_known_junctions	FALSE	canonical	1	18	junction_2	82.60078019540063	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	398	898	80.0	1	True	AATAAA	-24
PB.2803.16	chr12	+	3174	5	full-splice_match	NUDT4	ENST00000337179.9	9753	5	43	6536	30	-691	multi-exon	FALSE	canonical	1	109	junction_4	781.5634971005235	NA	33	NA	TRUE	NA	NA	NA	C	coding	180	543	401	943	30.0	1	True	TATAAA	-10
PB.2803.17	chr12	+	2678	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	30	2131	30	979	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	401	940	45.0	1	True	CATAAA	-18
PB.2803.10	chr12	+	4174	4	incomplete-splice_match	NUDT4	ENST00000337179.9	9753	5	40	5860	27	-15	intron_retention	FALSE	canonical	1	164	junction_3	837.0552882310437	NA	4	NA	TRUE	NA	NA	NA	C	coding	121	366	401	766	85.0	-2	True	AATAAA	-25
PB.2803.11	chr12	+	3850	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	27	962	27	-15	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	404	943	85.0	-2	True	AATAAA	-25
PB.7068.30	chr2	-	2386	14	novel_in_catalog	NCL	novel	4034	14	NA	NA	4	-65	combination_of_known_junctions	FALSE	canonical	1	55413	junction_13	2204101.297955992	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	84	2168	25.0	-11	True	TATAAA	-28
PB.10802.8	chr7	+	2532	15	novel_in_catalog	ST7	novel	2114	14	NA	NA	212	-10	combination_of_known_junctions	FALSE	canonical	1	1656	junction_1	102706.57336225528	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	83	1615	60.0	-3585	False	NA	NA
PB.7110.35	chr2	+	3386	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	7364	junction_2	1025813.3069514349	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	212	1297	20.0	-38	True	AATAAA	-22
PB.406.6	chr1	+	5379	6	full-splice_match	BTF3L4	ENST00000313334.12	4703	6	170	-846	-9	846	multi-exon	FALSE	canonical	1	1261	junction_4	56795.96941826066	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	99	575	25.0	0	True	TATAAA	-17
PB.4599.1	chr16	+	2281	13	novel_in_catalog	BANP	novel	802	3	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	65822	junction_9	39282.35527447052	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	108	1622	10.0	-5073	False	AATAAA	-20
PB.4599.2	chr16	+	2219	12	novel_not_in_catalog	BANP	novel	802	3	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	56434.42074546378	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	156	1469	10.0	-2	True	AATAAA	-20
PB.4599.3	chr16	+	2077	14	novel_in_catalog	BANP	novel	802	3	NA	NA	0	158	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	53134.07641119779	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	156	1745	70.0	-2	True	TTTAAA	-31
PB.4599.4	chr16	+	2283	13	full-splice_match	BANP	ENST00000393208.6	2283	13	-1	1	1	0	multi-exon	FALSE	non_canonical	0	0	junction_8	58570.66851936688	NA	3	NA	TRUE	NA	NA	NA	C	coding	490	1473	155	1627	15.0	-1	True	AATAAA	-17
PB.4599.5	chr16	+	2001	13	novel_in_catalog	BANP	novel	802	3	NA	NA	1	158	combination_of_known_junctions	FALSE	canonical	1	65822	junction_9	39282.35527447052	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	155	1669	70.0	-1	True	TTTAAA	-31
PB.4599.6	chr16	+	1893	12	full-splice_match	BANP	ENST00000355022.8	2164	12	-54	325	1	158	multi-exon	FALSE	non_canonical	0	0	junction_8	56434.42074546378	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	155	1561	70.0	-1	True	TTTAAA	-31
PB.4599.7	chr16	+	1675	9	incomplete-splice_match	BANP	ENST00000479780.6	1551	12	32522	-332	1338	158	5prime_fragment	FALSE	canonical	1	38097	junction_1	49240.16745440149	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	252	1343	70.0	NA	False	TTTAAA	-31
PB.12094.1	chrX	-	5618	41	novel_not_in_catalog	HUWE1	novel	14311	81	NA	NA	9	-15	any annotated donor/acceptor	FALSE	canonical	1	31629	junction_39	134098.66334136217	NA	1	NA	TRUE	NA	NA	NA	B	coding	1707	5121	498	5618	55.0	-1	True	AAGAAA	-3
PB.8629.14	chr3	-	2265	4	full-splice_match	NCBP2	ENST00000447325.5	2216	4	-51	2	8	-1	multi-exon	FALSE	canonical	1	9042	junction_3	486467.92345527664	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	4	True	AATAAA	-14
PB.11543.8	chr9	+	2703	9	novel_in_catalog	ZCCHC7	novel	2619	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	11619	junction_1	92718.41771317269	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	197	1825	35.0	31	True	AATAAA	-13
PB.11538.21	chr9	+	2534	19	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	25855	junction_1	113573.88176926458	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	235	2190	10.0	-2	True	AATAAA	-16
PB.11538.20	chr9	+	2634	20	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	494	junction_2	127459.04908760221	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	333	2288	10.0	-2	True	AATAAA	-18
PB.11538.23	chr9	+	2366	17	novel_in_catalog	MELK	novel	2485	18	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	20148	junction_10	110269.95488657597	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	152	2020	10.0	-2	True	AATAAA	-18
PB.11538.22	chr9	+	2488	18	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	129077.65901924807	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	771	2144	10.0	-2	True	AATAAA	-16
PB.11538.25	chr9	+	2151	15	novel_in_catalog	MELK	novel	2485	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	8143	junction_3	118827.4629725376	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	165	1808	10.0	-2	True	AATAAA	-15
PB.6386.3	chr2	-	4522	6	full-splice_match	SUPT7L	ENST00000405491.5	2280	6	5	-2247	5	-4	multi-exon	FALSE	canonical	1	39379	junction_4	177520.79816562342	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	615	1853	40.0	-26	True	ATTAAA	-21
PB.3539.9	chr14	+	3333	19	full-splice_match	RBM25	ENST00000261973.11	6910	19	106	3471	0	36	multi-exon	FALSE	canonical	1	547333	junction_4	307355.77691253205	NA	2	NA	TRUE	NA	NA	NA	C	coding	843	2532	180	2711	35.0	8	True	AATAGA	-11
PB.3539.8	chr14	+	4894	10	incomplete-splice_match	RBM25	ENST00000532683.5	6848	17	-6	14157	3	4793	3prime_fragment	FALSE	canonical	1	547333	junction_4	218814.97277227932	NA	4	NA	TRUE	NA	NA	NA	C	coding	300	903	186	1088	75.0	2	True	NA	NA
PB.3539.7	chr14	+	1514	11	incomplete-splice_match	RBM25	ENST00000261973.11	6910	19	99	17866	2	4853	3prime_fragment	FALSE	canonical	1	547333	junction_4	219957.22428836022	NA	2	NA	TRUE	NA	NA	NA	C	coding	442	1326	187	1512	65.0	1	True	NA	NA
PB.3539.6	chr14	+	5068	11	incomplete-splice_match	RBM25	ENST00000532683.5	6848	17	-10	13873	0	-4653	3prime_fragment	FALSE	canonical	1	547333	junction_4	350384.43065433146	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	190	1092	70.0	-2	True	AAGAAA	-26
PB.3539.5	chr14	+	1966	15	incomplete-splice_match	RBM25	ENST00000261973.11	6910	19	78	13001	-18	-12	3prime_fragment	FALSE	canonical	1	547333	junction_4	346894.04118393036	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1758	208	1965	75.0	3	True	AATAAA	-27
PB.3539.4	chr14	+	1646	12	incomplete-splice_match	RBM25	ENST00000261973.11	6910	19	77	17642	-19	-4653	3prime_fragment	FALSE	canonical	1	547333	junction_4	347803.3636853012	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1437	209	1645	70.0	2	True	AAGAAA	-26
PB.3539.3	chr14	+	5408	14	incomplete-splice_match	RBM25	ENST00000532683.5	6848	17	-29	9232	-19	-12	3prime_fragment	TRUE	canonical	1	547333	junction_4	342989.27986585733	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	209	1111	75.0	2	True	AATAAA	-27
PB.3539.2	chr14	+	4537	9	full-splice_match	RBM25	ENST00000525321.5	2470	9	-34	-2033	-19	2033	multi-exon	FALSE	canonical	1	547333	junction_4	144433.85579689886	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	209	1111	75.0	2	True	NA	NA
PB.3539.1	chr14	+	4231	19	full-splice_match	RBM25	ENST00000261973.11	6910	19	94	2585	-2	0	multi-exon	FALSE	canonical	1	547333	junction_4	307355.77691253205	NA	1	NA	TRUE	NA	NA	NA	C	coding	843	2532	192	2723	15.0	-4	True	ATTAAA	-16
PB.9406.10	chr5	-	4068	18	novel_in_catalog	SEMA6A	novel	6878	19	NA	NA	109	-6	combination_of_known_junctions	FALSE	canonical	1	3305	junction_6	65140.055313419056	NA	2	NA	TRUE	NA	NA	NA	C	coding	971	2916	680	3595	70.0	-3	True	AATACA	-7
PB.10777.19	chr7	+	2950	8	full-splice_match	BCAP29	ENST00000005259.8	4572	8	269	1353	0	1071	multi-exon	FALSE	canonical	1	279651	junction_1	114728.25877165359	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	71	796	25.0	0	True	ATTAAA	-22
PB.9406.11	chr5	-	3604	17	incomplete-splice_match	SEMA6A	ENST00000343348.10	6878	19	67	28303	67	6347	3prime_fragment	FALSE	canonical	1	44529	junction_1	41998.48067448207	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	722	2500	70.0	1	True	AATAAA	-10
PB.2497.1	chr12	+	3113	11	novel_in_catalog	PYROXD1	novel	1047	9	NA	NA	-3	-6	combination_of_known_junctions	TRUE	canonical	1	26	junction_9	15732.808925617828	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	1056	1523	75.0	-64	False	NA	NA
PB.7629.2	chr22	+	2466	5	full-splice_match	SNAP29	ENST00000215730.11	4287	5	104	1717	6	1682	multi-exon	FALSE	canonical	1	445659	junction_1	62987.82649250568	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	25	801	30.0	8	True	ATTAAA	-28
PB.2497.3	chr12	+	4074	12	full-splice_match	PYROXD1	ENST00000240651.13	4055	12	-29	10	3	-10	multi-exon	FALSE	canonical	1	26	junction_10	13742.201048336201	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	84	1586	45.0	-30	True	AATAAA	-28
PB.2497.2	chr12	+	3767	13	novel_not_in_catalog	PYROXD1	novel	1047	9	NA	NA	1	-10	intron_retention	TRUE	non_canonical	0	0	junction_12	14863.043799041374	NA	4	1	TRUE	NA	NA	NA	C	coding	500	1503	86	1588	45.0	-32	True	AATAAA	-28
PB.2497.5	chr12	+	3132	12	full-splice_match	PYROXD1	ENST00000240651.13	4055	12	22	901	-6	1	multi-exon	FALSE	canonical	1	26	junction_10	13742.201048336201	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	33	1535	90.0	-7	True	NA	NA
PB.2497.4	chr12	+	1747	12	full-splice_match	PYROXD1	ENST00000240651.13	4055	12	-27	2335	5	-3	multi-exon	FALSE	canonical	1	26	junction_10	13742.201048336201	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	82	1584	40.0	-28	True	TATAAA	-20
PB.7629.5	chr22	+	3620	5	full-splice_match	SNAP29	ENST00000215730.11	4287	5	42	625	42	-625	multi-exon	FALSE	canonical	1	445659	junction_1	62987.82649250568	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	87	863	70.0	-12	True	NA	NA
PB.7629.4	chr22	+	4244	5	full-splice_match	SNAP29	ENST00000215730.11	4287	5	42	1	42	-1	multi-exon	FALSE	canonical	1	445659	junction_1	62987.82649250568	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	87	863	10.0	-12	True	AATAAA	-22
PB.5744.1	chr19	-	2585	4	full-splice_match	ZNF799	ENST00000430385.3	2583	4	-3	1	-3	-1	multi-exon	FALSE	canonical	1	14527	junction_3	24613.500365088712	NA	0	NA	TRUE	NA	NA	NA	A	coding	643	1932	205	2136	25.0	-7	True	ATTAAA	-21
PB.323.8	chr1	-	2985	30	novel_in_catalog	COL9A2	novel	2862	32	NA	NA	50	-45	intron_retention	FALSE	canonical	1	19784	junction_29	62571.72501652325	NA	0	NA	TRUE	NA	NA	NA	B	coding	371	1116	284	1399	40.0	9	True	AATAAA	-19
PB.10024.9	chr6	-	3968	2	intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3557	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-14	True	NA	NA
PB.10024.8	chr6	-	2057	3	intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1855	junction_1	851.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-21	True	AATAAA	-28
PB.10024.3	chr6	-	2479	3	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	-42554	-106	any annotated donor/acceptor	FALSE	canonical	1	6445	junction_1	3790.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	593	1782	529	2310	75.0	-1	True	NA	NA
PB.10024.2	chr6	-	3155	3	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	-42518	606	any annotated donor/acceptor	FALSE	canonical	1	6445	junction_1	3790.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	593	1782	493	2274	10.0	-33	True	AATAAA	-13
PB.10024.1	chr6	-	4536	5	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	-42508	611	any annotated donor/acceptor	FALSE	canonical	1	4765	junction_2	1781.5749177343062	NA	1	NA	TRUE	NA	NA	NA	B	coding	829	2490	1161	3650	10.0	-23	True	AATAAA	-18
PB.10024.7	chr6	-	1907	3	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	-42506	-168247	any annotated donor/acceptor	FALSE	canonical	1	5188	junction_2	2068.5	NA	3	NA	FALSE	NA	NA	NA	B	coding	202	609	1159	1767	75.0	-21	True	AAGAAA	-45
PB.10024.6	chr6	-	2619	2	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	7430	-157601	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	7906	False	NA	NA
PB.10024.5	chr6	-	2507	4	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	-42463	-108489	any annotated donor/acceptor	FALSE	canonical	1	4765	junction_1	2057.1635812448167	NA	1	NA	TRUE	NA	NA	NA	B	coding	292	879	1116	1994	35.0	22	True	TATAAA	-21
PB.10024.4	chr6	-	2947	3	novel_not_in_catalog	PTCHD4	novel	2850	3	NA	NA	-42508	-10	any annotated donor/acceptor	FALSE	canonical	1	7905	junction_1	3060.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	94	285	29	313	50.0	-23	True	NA	NA
PB.2020.9	chr11	+	2592	14	novel_in_catalog	FERMT3	novel	1006	7	NA	NA	-13	1	intron_retention	FALSE	canonical	1	422169	junction_2	121766.62882272823	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	109	1191	5.0	0	True	TATAAA	-17
PB.2020.8	chr11	+	2715	13	novel_in_catalog	FERMT3	novel	1006	7	NA	NA	-19	5	intron_retention	FALSE	canonical	1	422169	junction_2	119479.10949417406	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	115	1197	5.0	-6	True	TATAAA	-25
PB.594.3	chr1	+	3604	9	novel_in_catalog	ATXN7L2	novel	3022	12	NA	NA	20	-2	intron_retention	FALSE	canonical	1	24483	junction_1	23951.31652925106	NA	1	NA	TRUE	NA	NA	NA	B	coding	349	1050	2423	3472	15.0	0	True	AAAAAG	-17
PB.2020.3	chr11	+	2643	14	novel_not_in_catalog	FERMT3	novel	1006	7	NA	NA	-8	5	intron_retention	FALSE	canonical	1	10330	junction_4	199775.2594619779	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	852	1535	5.0	-51	True	TATAAA	-25
PB.2020.2	chr11	+	2668	15	full-splice_match	FERMT3	ENST00000279227.9	2489	15	-170	-9	-114	5	multi-exon	TRUE	canonical	1	20594	junction_9	188210.21167823038	NA	3	1	TRUE	NA	NA	NA	C	coding	667	2004	266	2269	5.0	-4510	False	TATAAA	-25
PB.2020.1	chr11	+	2497	15	full-splice_match	FERMT3	ENST00000345728.9	2481	15	-11	-5	-11	5	multi-exon	FALSE	canonical	1	422169	junction_2	123264.85583476048	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	107	2098	5.0	2	True	TATAAA	-25
PB.2020.7	chr11	+	2605	14	novel_in_catalog	FERMT3	novel	1006	7	NA	NA	18	5	intron_retention	FALSE	canonical	1	422169	junction_2	123416.04481004977	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	134	1243	5.0	-25	True	TATAAA	-25
PB.2020.6	chr11	+	2379	14	incomplete-splice_match	FERMT3	ENST00000345728.9	2481	15	643	-5	-440	5	5prime_fragment	FALSE	canonical	1	422169	junction_1	117816.82525883561	NA	2	1	TRUE	NA	NA	NA	C	coding	483	1452	529	1980	5.0	-3697	False	TATAAA	-25
PB.2020.5	chr11	+	2231	16	novel_not_in_catalog	FERMT3	novel	1006	7	NA	NA	5	-19	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	191743.37106687386	NA	2	1	TRUE	NA	NA	NA	C	coding	663	1992	147	2138	10.0	-38	True	NA	NA
PB.2020.4	chr11	+	2646	14	novel_in_catalog	FERMT3	novel	1006	7	NA	NA	5	5	intron_retention	FALSE	canonical	1	422169	junction_2	120289.45243195142	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	147	1538	5.0	-38	True	TATAAA	-25
PB.9957.15	chr6	+	1371	7	full-splice_match	SRSF3	ENST00000477442.6	1095	7	-27	-249	-3	92	multi-exon	FALSE	canonical	1	425361	junction_4	994781.9194921429	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	121	495	15.0	2	True	AATAAA	-13
PB.9632.9	chr5	-	2622	7	full-splice_match	KIAA1191	ENST00000614420.4	2631	7	9	0	-1	0	multi-exon	FALSE	canonical	1	18854	junction_6	158330.56633161168	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	227	1087	20.0	-35	True	AATAAA	-19
PB.9632.8	chr5	-	2820	9	novel_not_in_catalog	KIAA1191	novel	2991	9	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	3018	junction_7	149793.353998882	NA	5	NA	TRUE	NA	NA	NA	C	coding	286	861	425	1285	20.0	-33	True	AATAAA	-19
PB.10589.1	chr7	-	2396	9	novel_not_in_catalog	STAG3L3	novel	1033	8	NA	NA	19	3738	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67930.99276793693	NA	9	2	TRUE	NA	NA	NA	C	coding	205	618	364	981	85.0	NA	False	NA	NA
PB.9632.4	chr5	-	3495	9	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3150	junction_5	149147.45886490782	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	1286	1960	20.0	-33	True	AATAAA	-19
PB.9632.7	chr5	-	2866	9	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	12106	junction_6	140050.33802975985	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	471	1331	20.0	-65	False	AATAAA	-19
PB.9632.6	chr5	-	5639	8	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	-1	0	intron_retention	FALSE	canonical	1	191433	junction_5	100548.64023903241	NA	5	NA	TRUE	NA	NA	NA	C	coding	224	675	3430	4104	20.0	-35	True	AATAAA	-19
PB.9632.1	chr5	-	3061	8	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	-1	1	intron_retention	FALSE	canonical	1	191433	junction_6	100072.11201173779	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	665	1525	15.0	-35	True	AATAAA	-20
PB.8946.8	chr4	+	2141	15	novel_not_in_catalog	LARP7	novel	2286	13	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	249703.5273492511	NA	2	1	TRUE	NA	NA	NA	C	coding	582	1749	135	1883	25.0	-3	True	AATAAA	-16
PB.9632.3	chr5	-	2730	8	full-splice_match	KIAA1191	ENST00000393725.6	2700	8	-33	3	-1	0	multi-exon	FALSE	canonical	1	61422	junction_6	134981.85453472126	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	335	1195	20.0	-35	True	AATAAA	-19
PB.9632.2	chr5	-	2639	8	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	-1	1	no_combination_of_known_junctions	FALSE	canonical	1	5530	junction_5	151432.00696561032	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	429	1103	15.0	-35	True	AATAAA	-20
PB.9763.2	chr6	+	2977	5	full-splice_match	FAM8A1	ENST00000259963.3	4677	5	26	1674	26	-1674	multi-exon	FALSE	canonical	1	46163	junction_3	30964.251722752804	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	30	1271	20.0	-7	True	AATAAA	-19
PB.9763.3	chr6	+	2147	5	full-splice_match	FAM8A1	ENST00000259963.3	4677	5	-4	2534	-4	-2534	multi-exon	FALSE	canonical	1	46163	junction_3	30964.251722752804	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	60	1301	35.0	-37	True	TATAAA	-24
PB.5948.2	chr19	-	3573	6	novel_not_in_catalog	ZNF566	novel	1154	2	NA	NA	-17	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	17053.727510430086	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	165	1424	25.0	-1	True	AATAAA	-17
PB.5564.9	chr19	+	1708	6	full-splice_match	CIRBP	ENST00000587896.5	1081	6	-7	-620	0	-2	multi-exon	FALSE	canonical	1	1074769	junction_4	1413828.5268389515	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	88	981	25.0	-2	True	ATTAAA	-16
PB.5564.8	chr19	+	2168	9	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	177145	junction_7	1660139.885510626	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	88	606	25.0	-2	True	AATAAA	-17
PB.5564.7	chr19	+	2439	7	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	32332	junction_2	1252266.1225391882	NA	3	NA	TRUE	NA	NA	NA	C	coding	244	735	140	874	25.0	-2	True	AATAAA	-20
PB.5564.6	chr19	+	2546	8	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	177145	junction_6	1770640.1909293158	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	88	981	25.0	-2	True	AATAAA	-20
PB.5564.5	chr19	+	3204	7	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	0	3	intron_retention	FALSE	canonical	1	203709	junction_1	1852033.1073699715	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	149	1042	10.0	-2	True	AATAAA	-26
PB.5564.4	chr19	+	3345	6	full-splice_match	CIRBP	ENST00000587896.5	1081	6	-7	-2257	0	0	multi-exon	FALSE	canonical	1	1074769	junction_4	1413828.5268389515	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	88	981	25.0	-2	True	AATAAA	-20
PB.5564.3	chr19	+	1333	7	full-splice_match	CIRBP	ENST00000320936.9	1328	7	-7	2	0	-2	multi-exon	FALSE	canonical	1	1074769	junction_4	1303005.5839047232	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	88	606	25.0	-2	True	ATTAAA	-16
PB.5564.2	chr19	+	2254	8	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	177145	junction_6	1529306.589821995	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	1282	1689	25.0	-3	True	AATAAA	-20
PB.5564.1	chr19	+	3138	7	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	652580	junction_6	1623112.0494208718	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	89	982	25.0	-3	True	AATAAA	-20
PB.9957.10	chr6	+	3094	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-6	1134	-5	-1134	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	123	617	20.0	0	True	NA	NA
PB.9964.7	chr6	-	2836	10	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-25	-1	intron_retention	FALSE	canonical	1	32272	junction_9	694876.9621292324	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	361	1125	5.0	-4	True	AATAAA	-17
PB.9964.6	chr6	-	2903	11	novel_not_in_catalog	MTCH1	novel	2006	12	NA	NA	-22	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	653631.3790146247	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	167	1192	5.0	-1	True	AATAAA	-17
PB.9964.5	chr6	-	2922	11	full-splice_match	MTCH1	ENST00000460219.2	1572	11	-26	-1324	-26	-1	multi-exon	FALSE	canonical	1	859014	junction_3	478135.95457969897	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	171	1211	5.0	-5	True	AATAAA	-17
PB.9964.4	chr6	-	2978	11	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-31	-1	intron_retention	FALSE	canonical	1	1027614	junction_3	453184.2163953198	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	176	1267	5.0	-10	True	AATAAA	-17
PB.9964.3	chr6	-	3309	10	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	859014	junction_3	484795.2376190372	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	969	1598	5.0	-6	True	AATAAA	-17
PB.9964.2	chr6	-	3355	10	novel_in_catalog	MTCH1	novel	2006	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	1027614	junction_3	455564.04446651775	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	964	1644	5.0	-1	True	AATAAA	-17
PB.9964.1	chr6	-	1713	12	full-splice_match	MTCH1	ENST00000373627.9	2057	12	343	1	170	-1	multi-exon	FALSE	canonical	1	1027614	junction_4	433679.19584756624	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	119	952	5.0	191	False	AATAAA	-17
PB.2487.2	chr12	-	1172	6	full-splice_match	ARHGDIB	ENST00000228945.8	1256	6	71	13	7	-13	multi-exon	FALSE	canonical	1	3718124	junction_5	960386.6001025629	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	75	680	10.0	2	True	AATAAA	-14
PB.8020.4	chr3	+	4677	19	novel_in_catalog	OXSR1	novel	471	2	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	1	13702	junction_4	117127.22470185156	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	706	2085	15.0	-86	True	AATAAA	-12
PB.8020.7	chr3	+	4387	17	novel_in_catalog	OXSR1	novel	471	2	NA	NA	55	-2	no_combination_of_known_junctions	FALSE	canonical	1	1397	junction_2	99218.55560382531	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	785	1792	15.0	-39	True	AATAAA	-15
PB.2487.1	chr12	-	4211	5	novel_in_catalog	ARHGDIB	novel	1256	6	NA	NA	7	-7	intron_retention	FALSE	canonical	1	3718124	junction_4	1065089.9802139958	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	75	446	15.0	2	True	AATAAA	-20
PB.8020.1	chr3	+	4407	18	novel_in_catalog	OXSR1	novel	471	2	NA	NA	129	-1	combination_of_known_junctions	FALSE	canonical	1	5803	junction_1	95063.58529697674	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	69	1811	20.0	-429	False	AATAAA	-16
PB.7635.1	chr22	+	2848	4	full-splice_match	UBE2L3	ENST00000342192.8	3028	4	180	0	-3	0	multi-exon	FALSE	canonical	1	136642	junction_1	132643.65176249066	NA	5	NA	TRUE	NA	NA	NA	C	coding	154	465	19	483	5.0	13	False	AATAAA	-18
PB.7635.2	chr22	+	2317	4	full-splice_match	UBE2L3	ENST00000342192.8	3028	4	167	544	-16	-544	multi-exon	FALSE	canonical	1	136642	junction_1	132643.65176249066	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	32	496	20.0	0	True	AATAAA	-28
PB.7635.3	chr22	+	1764	4	full-splice_match	UBE2L3	ENST00000342192.8	3028	4	172	1092	-11	-1092	multi-exon	FALSE	canonical	1	136642	junction_1	132643.65176249066	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	27	491	45.0	5	True	AATAAA	-28
PB.2805.14	chr12	+	4596	6	full-splice_match	MRPL42	ENST00000549982.5	15582	6	29	10957	0	2392	multi-exon	FALSE	canonical	1	387487	junction_1	196830.533041599	NA	5	NA	TRUE	NA	NA	NA	C	coding	142	429	133	561	70.0	0	True	NA	NA
PB.2805.12	chr12	+	3112	6	full-splice_match	MRPL42	ENST00000549982.5	15582	6	26	12444	-2	905	multi-exon	FALSE	canonical	1	387487	junction_1	196830.533041599	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	136	564	20.0	-3	True	NA	NA
PB.2805.13	chr12	+	1997	6	full-splice_match	MRPL42	ENST00000549982.5	15582	6	26	13559	-2	2	multi-exon	FALSE	canonical	1	387487	junction_1	196830.533041599	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	136	564	15.0	-3	True	ATTAAA	-39
PB.2805.10	chr12	+	3585	7	novel_not_in_catalog	MRPL42	novel	15582	6	NA	NA	-2	6323	intron_retention	FALSE	non_canonical	0	0	junction_6	358944.887565394	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	139	567	80.0	-3	True	NA	NA
PB.2805.11	chr12	+	3305	6	full-splice_match	MRPL42	ENST00000549982.5	15582	6	26	12251	-2	1098	multi-exon	FALSE	canonical	1	387487	junction_1	196830.533041599	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	136	564	15.0	-3	True	NA	NA
PB.8080.17	chr3	-	5512	27	novel_not_in_catalog	SMARCC1	novel	6375	28	NA	NA	25	-751	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	242136.03450195686	NA	3	1	TRUE	NA	NA	NA	C	coding	1088	3267	60	3326	25.0	36	True	NA	NA
PB.5470.9	chr18	-	2142	11	full-splice_match	SMAD2	ENST00000402690.6	12075	11	245	9688	-41	-14	multi-exon	FALSE	canonical	1	76274	junction_10	198369.8849760215	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	151	1554	30.0	-25	True	AATAAA	-22
PB.323.7	chr1	-	2828	25	novel_in_catalog	COL9A2	novel	2862	32	NA	NA	2890	-41	intron_retention	FALSE	canonical	1	171547	junction_24	33108.424190427184	NA	2	NA	TRUE	NA	NA	NA	B	coding	306	921	1254	2174	25.0	5075	False	AATAAA	-23
PB.11440.1	chr9	+	3567	7	full-splice_match	CD274	ENST00000381577.3	3644	7	19	58	19	-58	multi-exon	FALSE	canonical	1	70419	junction_1	11409.769960676489	NA	33	2	TRUE	NA	NA	NA	C	coding	290	873	68	940	25.0	2	True	AATAAA	-26
PB.8080.16	chr3	-	5573	28	full-splice_match	SMARCC1	ENST00000254480.9	6375	28	51	751	15	-751	multi-exon	FALSE	canonical	1	438864	junction_27	147698.30735901746	NA	1	NA	TRUE	NA	NA	NA	C	coding	1105	3318	70	3387	25.0	26	True	NA	NA
PB.6695.1	chr2	+	5754	12	full-splice_match	ZC3H6	ENST00000409871.5	11542	12	-24	5812	-24	-14	multi-exon	FALSE	canonical	1	37017	junction_1	13560.580191883231	NA	2	NA	TRUE	NA	NA	NA	A	coding	1189	3570	426	3995	70.0	0	True	AATAAA	-18
PB.10379.1	chr7	+	2322	7	novel_in_catalog	RNF216P1	novel	659	5	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	5141	junction_2	67085.13354292605	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-25	True	ATTAAA	-17
PB.8237.12	chr3	-	2378	4	novel_in_catalog	ROBO1	novel	7492	28	NA	NA	-10579	0	no_combination_of_known_junctions	FALSE	canonical	1	5011	junction_1	145472.33062071365	NA	1	NA	TRUE	NA	NA	NA	B	coding	214	645	60	704	25.0	-147	False	ATTAAA	-10
PB.10379.6	chr7	+	2144	6	novel_in_catalog	RNF216P1	novel	659	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	5141	junction_2	69558.74194664536	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-6	True	ATTAAA	-18
PB.11735.1	chr9	-	2831	3	incomplete-splice_match	CDC26	ENST00000374206.3	872	4	-21	5	-21	-5	intron_retention	FALSE	canonical	1	239	junction_1	49500.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-39	False	AATAAA	-12
PB.193.4	chr1	+	2899	10	full-splice_match	CEP85	ENST00000453146.1	2821	10	-79	1	-79	-1	multi-exon	FALSE	canonical	1	145596	junction_3	32533.399392009436	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	805	1386	20.0	2307	False	AATAAA	-13
PB.10379.4	chr7	+	2206	6	full-splice_match	RNF216P1	ENST00000404006.5	2201	6	-3	-2	-3	0	multi-exon	FALSE	canonical	1	5141	junction_2	65971.8549583078	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-16	True	ATTAAA	-18
PB.8010.10	chr3	+	2432	19	novel_not_in_catalog	MLH1	novel	2752	19	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	130730.85977867743	NA	3	1	TRUE	NA	NA	NA	C	coding	515	1548	694	2241	30.0	4	True	AATAAA	-18
PB.8010.11	chr3	+	2425	19	novel_in_catalog	MLH1	novel	2752	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	60503	junction_1	98481.63697353766	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	687	2234	30.0	-14	True	AATAAA	-18
PB.8489.20	chr3	-	2925	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	1	-3	intron_retention	FALSE	canonical	1	7034	junction_6	463893.51816502097	NA	4	NA	TRUE	NA	NA	NA	C	coding	320	963	1521	2483	40.0	602	False	AATAAA	-21
PB.10379.5	chr7	+	2564	5	incomplete-splice_match	RNF216P1	ENST00000406089.6	807	7	56	6915	-6	-761	3prime_fragment	FALSE	canonical	1	2309	junction_4	75616.12627112024	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6	True	AATAAA	-22
PB.4362.4	chr16	+	2931	4	novel_in_catalog	SLX1B	novel	1165	6	NA	NA	11	-2	intron_retention	FALSE	canonical	1	943	junction_1	1191.64489490601	NA	4	NA	TRUE	NA	NA	NA	A	coding	99	300	613	912	20.0	NA	False	AATAAA	-12
PB.4362.5	chr16	+	2735	11	full-splice_match	SLX1A-SULT1A3	ENST00000565342.5	2195	11	-518	-22	23	18	multi-exon	FALSE	canonical	1	1024	junction_4	7916.567460711744	NA	1	NA	TRUE	NA	NA	NA	A	coding	236	711	1617	2327	35.0	5476	False	AATAAA	-20
PB.9648.4	chr5	-	2533	14	full-splice_match	DBN1	ENST00000309007.9	2995	14	73	389	-31	-61	multi-exon	FALSE	canonical	1	710044	junction_13	262523.17527381494	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	148	2097	20.0	9811	False	NA	NA
PB.9648.5	chr5	-	2282	14	full-splice_match	DBN1	ENST00000309007.9	2995	14	95	618	-9	141	multi-exon	FALSE	canonical	1	710044	junction_13	262523.17527381494	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	126	2075	15.0	-21	True	AAAAAG	-15
PB.4362.1	chr16	+	1133	6	full-splice_match	SLX1A	ENST00000251303.10	1091	6	-42	0	-12	0	multi-exon	FALSE	canonical	1	3379	junction_1	9469.871973791409	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	211	1038	10.0	5436	False	AATAAA	-14
PB.4362.2	chr16	+	3442	3	novel_in_catalog	SLX1A	novel	1558	5	NA	NA	-12	2	intron_retention	FALSE	canonical	1	6126	junction_2	962.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	1120	1419	10.0	5436	False	AATAAA	-16
PB.4362.3	chr16	+	2281	12	novel_in_catalog	SLX1A	novel	1558	5	NA	NA	-12	6740	no_combination_of_known_junctions	FALSE	canonical	1	1024	junction_5	7594.501085904303	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	1190	1900	50.0	5436	False	NA	NA
PB.5310.1	chr17	-	4394	2	full-splice_match	BAIAP2-DT	ENST00000573167.2	4014	2	186	-566	-122	-6	multi-exon	FALSE	canonical	1	54261	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	112	339	294	632	45.0	-10	True	NA	NA
PB.10962.2	chr8	-	1942	7	novel_not_in_catalog	ERICH1	novel	1551	4	NA	NA	17	5	any annotated donor/acceptor	FALSE	canonical	1	1857	junction_2	102405.98142469782	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	20	1534	25.0	43	True	ATTAAA	-23
PB.10962.3	chr8	-	3736	3	incomplete-splice_match	ERICH1	ENST00000262109.7	1813	6	-6	24930	-6	-15265	3prime_fragment	FALSE	canonical	1	214533	junction_2	18139.0	NA	12	NA	TRUE	NA	NA	NA	C	coding	115	348	85	432	80.0	-22	False	NA	NA
PB.8449.2	chr3	+	3093	2	full-splice_match	CHST2	ENST00000309575.4	4582	2	425	1064	425	-1064	multi-exon	FALSE	canonical	1	112318	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	530	1593	960	2552	45.0	-15	True	AATAAA	-8
PB.8449.1	chr3	+	2871	3	novel_not_in_catalog	CHST2	novel	4582	2	NA	NA	407	-1064	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56159.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	530	1593	738	2330	45.0	-3573	False	AATAAA	-8
PB.6720.12	chr2	-	6104	37	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	1	472	combination_of_known_junctions	FALSE	canonical	1	6368	junction_12	70858.23426854947	NA	2	1	TRUE	NA	NA	NA	B	coding	1469	4410	352	4761	45.0	24	True	AATAAA	-18
PB.10023.12	chr6	+	4664	18	novel_not_in_catalog	CD2AP	novel	5412	18	NA	NA	397	-339	any annotated donor/acceptor	FALSE	canonical	1	21417	junction_7	96091.40560084455	NA	3	NA	TRUE	NA	NA	NA	C	coding	635	1908	60	1967	20.0	-26	True	AATAAA	-17
PB.6720.10	chr2	-	7600	37	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	-9	-256	combination_of_known_junctions	FALSE	canonical	1	6368	junction_12	70858.23426854947	NA	3	1	TRUE	NA	NA	NA	B	coding	1469	4410	362	4771	15.0	14	True	AATAAA	-37
PB.10777.28	chr7	+	2683	6	incomplete-splice_match	BCAP29	ENST00000445771.6	1157	9	1	16115	0	2044	3prime_fragment	FALSE	canonical	1	279651	junction_1	124617.50157084677	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	51	659	50.0	20	True	AAGAAA	-36
PB.6720.14	chr2	-	2838	4	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	-8	-10912	intron_retention	FALSE	canonical	1	134773	junction_3	32289.32803058414	NA	1	NA	TRUE	NA	NA	NA	B	coding	133	402	361	762	80.0	15	True	NA	NA
PB.5220.1	chr17	+	1786	2	full-splice_match	SSTR2	ENST00000357585.3	7683	2	-30	5927	-30	1395	multi-exon	FALSE	canonical	1	26236	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	400	1509	80.0	4	True	NA	NA
PB.10777.23	chr7	+	1931	9	full-splice_match	BCAP29	ENST00000445771.6	1157	9	-12	-762	2	-20	multi-exon	FALSE	canonical	1	29201	junction_8	230468.41524216367	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	64	1110	80.0	7	True	NA	NA
PB.10777.22	chr7	+	1853	8	full-splice_match	BCAP29	ENST00000005259.8	4572	8	275	2444	1	-20	multi-exon	FALSE	canonical	1	279651	junction_1	114728.25877165359	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	65	790	80.0	6	True	NA	NA
PB.10777.21	chr7	+	2871	8	novel_not_in_catalog	BCAP29	novel	4572	8	NA	NA	1	1549	any annotated donor/acceptor	FALSE	canonical	1	5541	junction_7	209560.6366709129	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	70	924	0.0	1	True	AATAAA	-15
PB.10777.20	chr7	+	2046	6	incomplete-splice_match	BCAP29	ENST00000445771.6	1157	9	-19	16772	0	1387	3prime_fragment	FALSE	canonical	1	279651	junction_1	124617.50157084677	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	71	679	15.0	0	True	AATAAA	-16
PB.10777.27	chr7	+	4672	6	incomplete-splice_match	BCAP29	ENST00000445771.6	1157	9	-3	14130	1	4029	3prime_fragment	FALSE	canonical	1	279651	junction_1	124617.50157084677	NA	14	NA	TRUE	NA	NA	NA	C	coding	202	609	55	663	25.0	16	True	AATAAA	-15
PB.5220.2	chr17	+	2988	2	full-splice_match	SSTR2	ENST00000357585.3	7683	2	-16	4711	-16	2611	multi-exon	FALSE	canonical	1	26236	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	386	1495	100.0	-68	False	NA	NA
PB.10777.25	chr7	+	1618	6	incomplete-splice_match	BCAP29	ENST00000445771.6	1157	9	-10	17191	-3	968	3prime_fragment	FALSE	canonical	1	279651	junction_1	124617.50157084677	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	62	670	60.0	9	True	NA	NA
PB.10777.24	chr7	+	2650	8	novel_in_catalog	BCAP29	novel	4572	8	NA	NA	3	1549	combination_of_known_junctions	TRUE	canonical	1	12466	junction_7	207524.0332973509	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	63	797	0.0	8	True	AATAAA	-15
PB.2417.9	chr12	-	2650	9	novel_in_catalog	IFFO1	novel	3101	12	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	59638	junction_5	82340.81506572242	NA	0	NA	TRUE	NA	NA	NA	B	coding	560	1683	26	1708	15.0	-13	True	NA	NA
PB.2417.8	chr12	-	3312	11	novel_not_in_catalog	IFFO1	novel	3101	12	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	116131.19979764266	NA	3	1	TRUE	NA	NA	NA	B	coding	199	600	1771	2370	15.0	-22	True	NA	NA
PB.5220.3	chr17	+	2108	2	full-splice_match	SSTR2	ENST00000357585.3	7683	2	-14	5589	-14	1733	multi-exon	FALSE	canonical	1	26236	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	384	1493	25.0	-66	False	NA	NA
PB.1621.1	chr10	-	1132	9	full-splice_match	CUEDC2	ENST00000369937.4	1191	9	53	6	-24	-6	multi-exon	FALSE	canonical	1	605364	junction_7	254058.955068227	NA	1	1	TRUE	NA	NA	NA	A	coding	287	864	94	957	20.0	-35	True	AGTAAA	-13
PB.8334.32	chr3	-	2624	12	full-splice_match	GOLGB1	ENST00000494517.5	4959	12	-75	2410	-1	-861	multi-exon	FALSE	canonical	1	48981	junction_6	56187.94446298251	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2511	113	2623	60.0	-1	True	AGTAAA	-41
PB.2417.1	chr12	-	3646	8	novel_in_catalog	IFFO1	novel	3101	12	NA	NA	-32	0	intron_retention	FALSE	canonical	1	120839	junction_4	68987.1403186633	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1350	87	1436	15.0	-74	False	NA	NA
PB.2417.3	chr12	-	3712	9	novel_in_catalog	IFFO1	novel	3101	12	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	28696	junction_8	106181.76920490812	NA	1	NA	TRUE	NA	NA	NA	B	coding	288	867	1893	2759	10.0	-35	True	NA	NA
PB.2417.2	chr12	-	2601	10	novel_not_in_catalog	IFFO1	novel	3101	12	NA	NA	-13	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	112911.69449662318	NA	1	1	TRUE	NA	NA	NA	B	coding	499	1500	148	1647	15.0	-55	False	NA	NA
PB.7421.5	chr20	-	1740	7	full-splice_match	ARFRP1	ENST00000612157.4	1698	7	-76	34	4	0	multi-exon	FALSE	canonical	1	98678	junction_6	169545.6189250158	NA	2	1	TRUE	NA	NA	NA	C	coding	173	522	133	654	5.0	-17	True	AATAAA	-13
PB.7421.4	chr20	-	1689	8	novel_in_catalog	ARFRP1	novel	2974	7	NA	NA	3	9	intron_retention	TRUE	canonical	1	127146	junction_7	148376.27235938134	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	129	734	10.0	-18	True	AATAAA	-37
PB.2417.7	chr12	-	3456	9	novel_not_in_catalog	IFFO1	novel	3101	12	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_8	100586.78294233045	NA	0	NA	TRUE	NA	NA	NA	B	coding	386	1161	97	1257	15.0	-4	True	NA	NA
PB.2417.6	chr12	-	3559	10	novel_not_in_catalog	IFFO1	novel	3101	12	NA	NA	21	0	intron_retention	FALSE	non_canonical	0	0	junction_9	117574.21206966462	NA	0	NA	TRUE	NA	NA	NA	B	coding	288	867	1750	2616	15.0	-1	True	NA	NA
PB.8334.30	chr3	-	2775	13	incomplete-splice_match	GOLGB1	ENST00000482512.5	10295	22	-18	33786	0	-860	3prime_fragment	FALSE	canonical	1	42100	junction_11	67889.3540277528	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2517	257	2773	55.0	0	True	AGTAAA	-42
PB.611.8	chr1	-	2006	13	novel_not_in_catalog	DENND2D	novel	950	4	NA	NA	41	-8	any annotated donor/acceptor	FALSE	canonical	1	11942	junction_6	142096.74414158435	NA	5	1	TRUE	NA	NA	NA	C	coding	218	657	16	672	15.0	-16	True	AGTAAA	-12
PB.6320.4	chr2	+	3225	2	novel_in_catalog	TRIB2	novel	4391	3	NA	NA	-481	-5	no_combination_of_known_junctions	FALSE	canonical	1	6237	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	985	1290	35.0	-16	True	AATAAA	-17
PB.8246.2	chr3	-	3408	16	full-splice_match	PROS1	ENST00000650591.1	3432	16	35	-11	-1	-4	multi-exon	FALSE	canonical	1	12339	junction_15	72206.66975268513	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	150	2276	40.0	-3	True	AATAAA	-16
PB.6681.1	chr2	-	1732	1	antisense	novelGene_RANBP2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1613.2	chr10	+	2538	1	full-splice_match	HPS6	ENST00000299238.6	2649	1	110	1	110	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	549	1650	654	2303	25.0	36	False	AATATA	-18
PB.8437.5	chr3	+	3755	6	incomplete-splice_match	RASA2	ENST00000286364.7	5614	24	99596	-1	-54	1	5prime_fragment	FALSE	canonical	1	71130	junction_1	31635.86027911996	NA	3	NA	TRUE	NA	NA	NA	C	coding	239	720	6	725	15.0	NA	False	AATAAA	-16
PB.1613.1	chr10	+	2903	1	full-splice_match	HPS6	ENST00000299238.6	2649	1	-12	-242	-12	242	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	775	2328	98	2425	50.0	7	True	NA	NA
PB.6722.14	chr2	+	2852	6	full-splice_match	TSN	ENST00000389682.7	3420	6	223	345	53	214	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	25	711	20.0	27	True	ATTAAA	-21
PB.6722.15	chr2	+	2590	6	full-splice_match	TSN	ENST00000389682.7	3420	6	157	673	5	1	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	91	777	15.0	6	True	ATTAAA	-14
PB.8946.9	chr4	+	2085	14	novel_not_in_catalog	LARP7	novel	2286	13	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	206850.80770949626	NA	1	1	TRUE	NA	NA	NA	C	coding	582	1749	79	1827	25.0	0	True	AATAAA	-16
PB.6722.10	chr2	+	3211	5	full-splice_match	TSN	ENST00000536142.5	3328	5	114	3	0	-3	multi-exon	FALSE	canonical	1	13393	junction_4	301942.59759710537	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	122	568	15.0	-25	True	ATTAAA	-26
PB.6722.11	chr2	+	3446	6	full-splice_match	TSN	ENST00000389682.7	3420	6	127	-153	0	153	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	121	807	65.0	-24	True	AATAAA	-21
PB.6722.12	chr2	+	2651	5	full-splice_match	TSN	ENST00000536142.5	3328	5	115	562	0	-3	multi-exon	FALSE	canonical	1	13393	junction_4	301942.59759710537	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	121	567	25.0	-24	True	AATAAA	-20
PB.6722.13	chr2	+	2238	2	incomplete-splice_match	TSN	ENST00000467324.5	2843	6	7346	3	6834	-3	5prime_fragment	FALSE	canonical	1	752652	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	3	314	25.0	6491	False	AATAAA	-20
PB.10010.6	chr6	+	2776	4	full-splice_match	C6orf223	ENST00000336600.5	3581	4	-15	820	5	-12	multi-exon	FALSE	canonical	1	38521	junction_1	15505.990247499692	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	36	764	35.0	0	True	AATGAA	-8
PB.6737.6	chr2	-	3874	20	novel_not_in_catalog	SMPD4	novel	3614	17	NA	NA	-338	-1	any annotated donor/acceptor	FALSE	canonical	1	265	junction_19	183524.67704581333	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	216	2729	10.0	-3	True	AATAAA	-16
PB.11750.12	chr9	+	3218	2	novel_not_in_catalog	TRIM32	novel	3717	2	NA	NA	193	-549	any annotated donor/acceptor	FALSE	canonical	1	3350	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	212	2173	10.0	199	False	ATTAAA	-21
PB.6737.1	chr2	-	4269	20	full-splice_match	SMPD4	ENST00000409031.5	4896	20	627	0	-366	0	multi-exon	FALSE	canonical	1	1833	junction_9	183477.72929099159	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	523	3123	10.0	1766	False	AATAAA	-17
PB.3835.2	chr15	+	942	4	full-splice_match	B2M	ENST00000648006.1	943	4	0	1	0	0	multi-exon	FALSE	canonical	1	38773590	junction_3	5409613.469504843	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	31	390	20.0	0	True	AATAAA	-13
PB.3835.3	chr15	+	3249	3	full-splice_match	B2M	ENST00000559916.1	1081	3	0	-2168	0	320	multi-exon	FALSE	canonical	1	47900283	junction_1	1878111.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	35	394	70.0	-4	True	NA	NA
PB.3835.1	chr15	+	1480	1	full-splice_match	B2M	ENST00000632133.1	2403	1	-1264	2187	0	-2187	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-4	True	NA	NA
PB.3835.6	chr15	+	1551	4	full-splice_match	B2M	ENST00000558401.6	1705	4	27	127	1	-101	multi-exon	FALSE	canonical	1	38773590	junction_3	5409613.469504843	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	34	393	15.0	-3	True	NA	NA
PB.3835.7	chr15	+	2822	2	incomplete-splice_match	B2M	ENST00000648006.1	943	4	-3	1	1	0	intron_retention	FALSE	canonical	1	47900283	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	34	402	20.0	-3	True	AATAAA	-13
PB.3835.4	chr15	+	1672	4	full-splice_match	B2M	ENST00000558401.6	1705	4	26	7	0	-7	multi-exon	FALSE	canonical	1	38773590	junction_3	5409613.469504843	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	35	394	15.0	-4	True	TTTAAA	-21
PB.3835.5	chr15	+	1572	3	full-splice_match	B2M	ENST00000559720.5	1220	3	27	-379	1	0	multi-exon	FALSE	canonical	1	38773590	junction_2	4563346.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	34	402	20.0	-3	True	AATAAA	-13
PB.3835.8	chr15	+	1320	1	full-splice_match	B2M	ENST00000632133.1	2403	1	-1262	2345	2	-2345	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-2	True	NA	NA
PB.3835.9	chr15	+	1018	5	novel_not_in_catalog	B2M	novel	1220	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	6209	junction_4	24921402.92810498	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	33	392	20.0	-2	True	AATAAA	-13
PB.7627.5	chr22	+	3223	17	novel_not_in_catalog	MED15	novel	590	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2583	junction_8	232427.29960002413	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	98	2296	10.0	-34	True	AATAAA	-30
PB.7627.4	chr22	+	3310	18	novel_not_in_catalog	MED15	novel	590	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3698	junction_9	242336.55510682863	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	80	2395	15.0	-16	True	AATAAA	-18
PB.5680.3	chr19	+	3869	7	novel_not_in_catalog	ZNF317	novel	4073	7	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	20703	junction_6	71695.52087125108	NA	2	NA	TRUE	NA	NA	NA	C	coding	563	1692	292	1983	20.0	-3	True	NA	NA
PB.7627.6	chr22	+	3146	18	novel_not_in_catalog	MED15	novel	590	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_7	240614.23761881966	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	98	2233	15.0	-34	True	AATAAA	-16
PB.7627.1	chr22	+	2449	13	novel_not_in_catalog	MED15	novel	590	6	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	263938.0430233975	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	344	1537	15.0	-42	True	AATAAA	-15
PB.10475.4	chr7	-	2977	3	novel_in_catalog	KBTBD2	novel	3745	4	NA	NA	258	-2	intron_retention	FALSE	canonical	1	8098	junction_2	137110.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	109	1806	20.0	404	False	AATAAA	-13
PB.7627.3	chr22	+	3054	16	full-splice_match	MED15	ENST00000382974.6	2235	16	-63	-756	-4	4	multi-exon	FALSE	canonical	1	26120	junction_4	245333.3058303789	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	102	2135	15.0	-38	True	AATAAA	-22
PB.7627.2	chr22	+	3170	17	novel_in_catalog	MED15	novel	590	6	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	26120	junction_4	255361.9960842047	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	103	2256	15.0	-39	True	AATAAA	-17
PB.10475.9	chr7	-	1935	4	full-splice_match	KBTBD2	ENST00000304056.8	3745	4	304	1506	304	409	multi-exon	FALSE	canonical	1	124035	junction_3	94878.03327547543	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1539	397	1935	35.0	-1	True	AATAAA	-22
PB.10475.8	chr7	-	2386	4	full-splice_match	KBTBD2	ENST00000304056.8	3745	4	303	1056	303	859	multi-exon	FALSE	canonical	1	124035	junction_3	94878.03327547543	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	398	2269	25.0	-2	True	CATAAA	-21
PB.7627.9	chr22	+	2602	13	novel_not_in_catalog	MED15	novel	590	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	263938.0430233975	NA	2	1	TRUE	NA	NA	NA	C	coding	529	1590	98	1687	15.0	-34	True	AATAAA	-18
PB.7627.8	chr22	+	3007	17	novel_not_in_catalog	MED15	novel	590	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_7	248019.47028758522	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	98	2092	15.0	-34	True	AATAAA	-18
PB.8178.4	chr3	-	2197	13	full-splice_match	RFT1	ENST00000296292.7	5108	13	-5	2916	-5	266	multi-exon	FALSE	canonical	1	179492	junction_12	33479.27616410221	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	68	1693	25.0	-33	True	NA	NA
PB.7433.3	chr20	+	3809	6	full-splice_match	PCMTD2	ENST00000369758.8	3212	6	-17	-580	-17	3	multi-exon	FALSE	canonical	1	25677	junction_4	167763.21922113918	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	172	1176	25.0	3	True	AATAAA	-25
PB.8178.3	chr3	-	2788	13	full-splice_match	RFT1	ENST00000296292.7	5108	13	9	2311	0	871	multi-exon	FALSE	canonical	1	179492	junction_12	33479.27616410221	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	54	1679	15.0	-19	True	NA	NA
PB.4844.2	chr17	-	2689	4	full-splice_match	IFT20	ENST00000322326.12	820	4	-3	-1866	-3	0	multi-exon	FALSE	canonical	1	85598	junction_3	139540.59416050467	NA	2	NA	TRUE	NA	NA	NA	C	coding	122	369	281	649	10.0	-4	True	AATAAA	-19
PB.8178.1	chr3	-	4997	12	novel_in_catalog	AC096887.1	novel	823	6	NA	NA	-31008	-42028	no_combination_of_known_junctions	FALSE	canonical	1	5470	junction_2	67353.68599593989	NA	0	NA	TRUE	NA	NA	NA	B	coding	371	1116	62	1177	30.0	-27	True	AATAAA	-21
PB.7522.1	chr21	-	2666	5	novel_in_catalog	PSMG1	novel	2154	7	NA	NA	0	-10	intron_retention	FALSE	canonical	1	471672	junction_4	294870.935855312	NA	2	NA	TRUE	NA	NA	NA	A	coding	127	384	2161	2544	45.0	-9	True	AATAAA	-6
PB.5680.1	chr19	+	4057	7	full-splice_match	ZNF317	ENST00000247956.10	4073	7	16	0	-1	0	multi-exon	FALSE	canonical	1	97811	junction_1	36138.542209115185	NA	24	NA	TRUE	NA	NA	NA	C	coding	595	1788	290	2077	20.0	-1	True	NA	NA
PB.1225.15	chr1	+	1365	11	incomplete-splice_match	LGALS8	ENST00000450372.6	6281	12	562	4699	-5	1	5prime_fragment	FALSE	canonical	1	151905	junction_7	125769.63749844396	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	168	1244	5.0	16	True	NA	NA
PB.7242.4	chr20	-	1946	7	full-splice_match	E2F1	ENST00000343380.5	2503	7	50	507	50	-507	multi-exon	FALSE	canonical	1	77856	junction_6	126721.29254084422	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	91	1404	30.0	-5	True	NA	NA
PB.7242.2	chr20	-	2346	6	novel_not_in_catalog	E2F1	novel	2503	7	NA	NA	20	0	intron_retention	FALSE	non_canonical	0	0	junction_2	192167.4006501623	NA	2	1	TRUE	NA	NA	NA	C	coding	183	552	65	616	5.0	-2	True	AATAAA	-16
PB.8457.2	chr3	+	3840	7	full-splice_match	GYG1	ENST00000296048.10	1890	7	76	-2026	-12	1990	multi-exon	FALSE	canonical	1	218712	junction_5	26816.383943506542	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	114	1115	80.0	-13	True	CATAAA	-17
PB.8457.1	chr3	+	1826	7	full-splice_match	GYG1	ENST00000296048.10	1890	7	62	2	2	-1	multi-exon	FALSE	canonical	1	218712	junction_5	26816.383943506542	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	128	1129	25.0	16	True	AATAAA	-14
PB.7242.1	chr20	-	2214	7	novel_not_in_catalog	E2F1	novel	2503	7	NA	NA	21	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	150502.3556290362	NA	3	1	TRUE	NA	NA	NA	C	coding	214	645	519	1163	5.0	-1	True	AATAAA	-18
PB.240.15	chr1	-	3924	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	1	17554	junction_13	151134.48518404888	NA	4	1	TRUE	NA	NA	NA	C	coding	1154	3465	108	3572	75.0	5	True	NA	NA
PB.7343.6	chr20	+	2571	21	full-splice_match	DDX27	ENST00000618172.4	2567	21	-11	7	-11	-7	multi-exon	FALSE	canonical	1	359238	junction_8	162108.48776825352	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	45	2342	60.0	-13	True	ATTAAA	-17
PB.7343.7	chr20	+	1996	17	novel_in_catalog	DDX27	novel	2693	21	NA	NA	2	-4757	combination_of_known_junctions	FALSE	canonical	1	47461	junction_10	233771.80467671587	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1965	32	1996	60.0	0	True	NA	NA
PB.7343.4	chr20	+	2555	22	novel_in_catalog	DDX27	novel	2693	21	NA	NA	31	-143	combination_of_known_junctions	FALSE	canonical	1	47461	junction_10	235345.13014307086	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	72	2462	90.0	0	True	NA	NA
PB.6101.2	chr19	-	6044	14	novel_in_catalog	ZC3H4	novel	6119	15	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	93593	junction_13	73067.42096368273	NA	2	NA	TRUE	NA	NA	NA	B	coding	1254	3765	116	3880	25.0	1499	False	ATTAAA	-16
PB.7343.2	chr20	+	3525	20	novel_in_catalog	DDX27	novel	2693	21	NA	NA	29	-143	intron_retention	FALSE	canonical	1	359238	junction_8	156099.1502310945	NA	4	NA	TRUE	NA	NA	NA	C	coding	476	1431	74	1504	90.0	-2	True	NA	NA
PB.6101.4	chr19	-	2439	1	incomplete-splice_match	ZC3H4	ENST00000253048.9	6119	15	47122	5	18725	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	112	339	1362	1700	25.0	-1911	False	ATTAAA	-16
PB.69.4	chr1	-	2160	11	novel_in_catalog	SLC2A5	novel	4165	12	NA	NA	-50	1483	no_combination_of_known_junctions	FALSE	canonical	1	2163	junction_3	72912.76858520735	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	119	1522	25.0	-20	True	AATAAA	-20
PB.7343.1	chr20	+	2019	17	incomplete-splice_match	DDX27	ENST00000371764.8	2643	21	20	2145	20	-2138	3prime_fragment	FALSE	canonical	1	359238	junction_8	152965.79396866754	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	83	2017	65.0	-11	True	NA	NA
PB.1225.11	chr1	+	2242	10	full-splice_match	LGALS8	ENST00000366584.8	4369	10	383	1744	-3	3	multi-exon	FALSE	canonical	1	231979	junction_7	95754.1312843717	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	187	1137	25.0	-3	True	ATTAAA	-23
PB.5470.1	chr18	-	5397	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	-38	3158	combination_of_known_junctions	FALSE	canonical	1	58548	junction_11	208791.22695946702	NA	3	NA	TRUE	NA	NA	NA	C	coding	467	1404	234	1637	10.0	-22	True	AATAAA	-16
PB.7343.8	chr20	+	2421	21	full-splice_match	DDX27	ENST00000618172.4	2567	21	3	143	3	-143	multi-exon	FALSE	canonical	1	359238	junction_8	162108.48776825352	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	31	2328	90.0	1	True	NA	NA
PB.1225.10	chr1	+	3814	10	full-splice_match	LGALS8	ENST00000366584.8	4369	10	383	172	-3	-172	multi-exon	FALSE	canonical	1	231979	junction_7	95754.1312843717	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	187	1137	75.0	-3	True	NA	NA
PB.10618.4	chr7	-	5945	16	novel_in_catalog	POM121C	novel	4073	2	NA	NA	-49	-1	no_combination_of_known_junctions	FALSE	canonical	1	3766	junction_5	153902.95179971913	NA	3	NA	TRUE	NA	NA	NA	C	coding	987	2964	974	3937	20.0	-22	False	AATAAA	-17
PB.1225.13	chr1	+	3747	11	incomplete-splice_match	LGALS8	ENST00000450372.6	6281	12	546	2333	0	-362	5prime_fragment	FALSE	canonical	1	151905	junction_7	125769.63749844396	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	184	1260	45.0	0	True	AATAAA	-6
PB.7278.5	chr20	-	3354	22	full-splice_match	RBL1	ENST00000373664.7	5684	22	-33	2363	-33	-2363	multi-exon	FALSE	canonical	1	72671	junction_20	27392.004748145926	NA	2	NA	TRUE	NA	NA	NA	C	coding	1068	3207	101	3307	20.0	0	True	GATAAA	-24
PB.7278.4	chr20	-	5174	22	full-splice_match	RBL1	ENST00000373664.7	5684	22	-3	513	-3	-513	multi-exon	FALSE	canonical	1	72671	junction_20	27392.004748145926	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	71	3277	45.0	-2	True	NA	NA
PB.10206.6	chr6	-	2904	5	incomplete-splice_match	SOGA3	ENST00000465909.2	3756	7	2801	1792	2801	-1792	internal_fragment	FALSE	canonical	1	59727	junction_2	17715.266387709216	NA	0	NA	TRUE	NA	NA	NA	A	coding	667	2004	308	2311	85.0	3288	False	NA	NA
PB.11445.10	chr9	+	1899	5	full-splice_match	MLANA	ENST00000381471.1	1000	5	-22	-877	-8	-784	multi-exon	FALSE	canonical	1	6584	junction_1	122200.54769926361	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	429	785	25.0	7	True	CATAAA	-16
PB.7278.1	chr20	-	5677	22	full-splice_match	RBL1	ENST00000373664.7	5684	22	-1	8	-1	-8	multi-exon	FALSE	canonical	1	72671	junction_20	27392.004748145926	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	69	3275	45.0	0	True	AATAAA	-21
PB.10618.6	chr7	-	5758	13	full-splice_match	POM121C	ENST00000607367.5	3690	13	-60	-2008	-60	-1	multi-exon	FALSE	canonical	1	3766	junction_5	166948.8601683786	NA	2	NA	TRUE	NA	NA	NA	C	coding	1229	3690	61	3750	20.0	NA	False	AATAAA	-17
PB.7278.3	chr20	-	5285	22	full-splice_match	RBL1	ENST00000373664.7	5684	22	-10	409	-10	-409	multi-exon	FALSE	canonical	1	72671	junction_20	27392.004748145926	NA	7	NA	TRUE	NA	NA	NA	C	coding	1068	3207	78	3284	40.0	-9	True	TATAAA	-17
PB.7278.2	chr20	-	5410	22	full-splice_match	RBL1	ENST00000373664.7	5684	22	-1	275	-1	-275	multi-exon	FALSE	canonical	1	72671	junction_20	27392.004748145926	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	69	3275	70.0	0	True	NA	NA
PB.1609.7	chr10	+	4897	15	full-splice_match	BTRC	ENST00000370187.7	6134	15	66	1171	22	-1169	multi-exon	FALSE	canonical	1	58571	junction_1	39190.59453784278	NA	2	NA	TRUE	NA	NA	NA	C	coding	605	1818	53	1870	35.0	-36	True	AATAAA	-31
PB.1609.6	chr10	+	2140	14	full-splice_match	BTRC	ENST00000408038.6	5982	14	6	3836	6	2294	multi-exon	FALSE	canonical	1	38974	junction_1	41306.7166048641	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	69	1778	15.0	-52	True	TATAAA	-21
PB.1609.5	chr10	+	2995	15	full-splice_match	BTRC	ENST00000370187.7	6134	15	39	3100	-5	3030	multi-exon	FALSE	canonical	1	58571	junction_1	39190.59453784278	NA	2	NA	TRUE	NA	NA	NA	C	coding	605	1818	80	1897	35.0	-63	True	AATAAA	-20
PB.1609.4	chr10	+	6006	14	full-splice_match	BTRC	ENST00000393441.8	6084	14	36	42	0	-42	multi-exon	TRUE	canonical	1	6151	junction_2	54412.47937156464	NA	4	NA	TRUE	NA	NA	NA	C	coding	579	1740	113	1852	70.0	-96	False	NA	NA
PB.1609.3	chr10	+	6074	15	full-splice_match	BTRC	ENST00000370187.7	6134	15	16	44	10	-42	multi-exon	FALSE	canonical	1	58571	junction_1	39190.59453784278	NA	2	NA	TRUE	NA	NA	NA	C	coding	605	1818	103	1920	70.0	-86	False	NA	NA
PB.1609.2	chr10	+	6041	14	full-splice_match	BTRC	ENST00000408038.6	5982	14	-63	4	11	-2	multi-exon	FALSE	canonical	1	38974	junction_1	41306.7166048641	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	138	1847	10.0	-121	False	ATTAAA	-10
PB.1609.1	chr10	+	2218	15	full-splice_match	BTRC	ENST00000370187.7	6134	15	80	3836	36	2294	multi-exon	FALSE	canonical	1	58571	junction_1	39190.59453784278	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	39	1856	15.0	-22	True	TATAAA	-21
PB.4078.1	chr15	+	6354	38	full-splice_match	IQGAP1	ENST00000268182.9	7233	38	25	854	-4	0	multi-exon	FALSE	canonical	1	634527	junction_11	249498.7952662623	NA	1	NA	TRUE	NA	NA	NA	C	coding	1657	4974	100	5073	70.0	-32	True	GATAAA	-15
PB.7409.3	chr20	+	2675	2	novel_not_in_catalog	LINC01749	novel	943	2	NA	NA	-26	-49760	any annotated donor/acceptor	FALSE	canonical	1	1899	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-4220	False	AATAAA	-19
PB.7409.2	chr20	+	2734	3	novel_not_in_catalog	LINC01749	novel	943	2	NA	NA	-31	864	intron_retention	FALSE	non_canonical	0	0	junction_2	28.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	1578	1931	40.0	2	True	AATAAA	-7
PB.7409.1	chr20	+	2920	2	novel_not_in_catalog	LINC01749	novel	943	2	NA	NA	-14	-71013	any annotated donor/acceptor	FALSE	canonical	1	10187	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	112	339	2558	2896	10.0	1	True	NA	NA
PB.7409.7	chr20	+	2794	2	novel_not_in_catalog	LINC01749	novel	943	2	NA	NA	5677	-49760	any annotated donor/acceptor	FALSE	canonical	1	308	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	1483	False	AATAAA	-19
PB.7409.6	chr20	+	3491	7	novel_not_in_catalog	LINC01749	novel	943	2	NA	NA	9	864	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	887.6413345991099	NA	0	NA	TRUE	NA	NA	NA	B	coding	118	357	710	1066	40.0	24	True	AATAAA	-7
PB.4078.8	chr15	+	6489	38	full-splice_match	IQGAP1	ENST00000268182.9	7233	38	58	686	-1	168	multi-exon	FALSE	canonical	1	634527	junction_11	249498.7952662623	NA	1	NA	TRUE	NA	NA	NA	C	coding	1657	4974	67	5040	20.0	1	True	AATAAA	-23
PB.4078.9	chr15	+	2880	24	incomplete-splice_match	IQGAP1	ENST00000633485.1	5863	39	29	24162	-1	-411	3prime_fragment	FALSE	canonical	1	634527	junction_11	146771.70787691936	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2814	67	2880	65.0	1	True	AGTAAA	-10
PB.1788.7	chr11	-	2718	6	novel_not_in_catalog	ARFIP2	novel	3846	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	1	5336	junction_3	344862.54490182025	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	143	496	35.0	-8	True	AATAAA	-9
PB.2742.1	chr12	+	3455	1	incomplete-splice_match	DYRK2	ENST00000344096.3	8912	3	12984	247	10236	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-15
PB.1788.5	chr11	-	1715	8	full-splice_match	ARFIP2	ENST00000254584.6	2543	8	-10	838	1	1	multi-exon	FALSE	canonical	1	160992	junction_7	226295.62172521147	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	95	1120	20.0	0	True	AATAAA	-17
PB.1788.4	chr11	-	1814	8	full-splice_match	ARFIP2	ENST00000396777.7	1868	8	62	-8	-31	8	multi-exon	FALSE	canonical	1	161079	junction_7	226269.9500923981	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	187	1212	20.0	-19	False	AATAAA	-24
PB.1788.3	chr11	-	2584	8	full-splice_match	ARFIP2	ENST00000396777.7	1868	8	105	-821	-7	-18	multi-exon	FALSE	canonical	1	161079	junction_7	226269.9500923981	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	144	1169	90.0	-9	True	NA	NA
PB.1788.2	chr11	-	2992	7	novel_in_catalog	ARFIP2	novel	3846	8	NA	NA	-6	-18	intron_retention	FALSE	canonical	1	160992	junction_6	242665.00159324583	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	103	993	90.0	-8	True	NA	NA
PB.1788.1	chr11	-	3107	8	novel_in_catalog	ARFIP2	novel	3846	8	NA	NA	-7	-18	intron_retention	FALSE	canonical	1	41802	junction_3	334359.8654169376	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	144	752	90.0	-9	True	NA	NA
PB.6208.4	chr19	+	3669	16	novel_in_catalog	LENG8	novel	2825	16	NA	NA	-1	6	intron_retention	FALSE	canonical	1	186423	junction_15	354944.1101019458	NA	0	NA	TRUE	NA	NA	NA	B	coding	800	2403	174	2576	5.0	-11	True	ATTAAA	-21
PB.8092.27	chr3	-	2411	14	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	10	914	combination_of_known_junctions	FALSE	canonical	1	7026	junction_13	59807.27296345691	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	48	1424	25.0	5075	False	CATAAA	-9
PB.4183.4	chr16	+	3017	4	novel_not_in_catalog	AC141586.1	novel	2748	4	NA	NA	-27	3152	any annotated donor/acceptor	FALSE	canonical	1	1703	junction_3	28837.643342609594	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	26	388	75.0	2	True	NA	NA
PB.6208.8	chr19	+	3797	16	novel_in_catalog	LENG8	novel	2825	16	NA	NA	-128	-9	intron_retention	FALSE	canonical	1	17138	junction_1	429641.982761896	NA	0	NA	TRUE	NA	NA	NA	B	coding	800	2403	317	2719	35.0	-32	True	ATTAAA	-6
PB.4183.1	chr16	+	4432	3	novel_in_catalog	AC141586.1	novel	2748	4	NA	NA	-20	-1173	intron_retention	FALSE	canonical	1	60732	junction_1	6054.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	2586	3086	35.0	0	True	NA	NA
PB.8818.14	chr4	-	2324	12	novel_not_in_catalog	RASSF6	novel	5994	11	NA	NA	32	627	any annotated donor/acceptor	TRUE	canonical	1	169	junction_11	19389.653484046717	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	302	1315	25.0	0	True	ATTAAA	-14
PB.4183.3	chr16	+	4258	3	novel_in_catalog	AC141586.1	novel	2748	4	NA	NA	-27	-1300	intron_retention	FALSE	canonical	1	60732	junction_1	6054.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	2539	3039	75.0	2	True	NA	NA
PB.4183.2	chr16	+	1351	4	full-splice_match	AC141586.1	ENST00000399702.5	2748	4	97	1300	-27	-1300	multi-exon	FALSE	canonical	1	60732	junction_1	5029.907023660246	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	26	388	75.0	2	True	NA	NA
PB.8447.1	chr3	-	1875	9	full-splice_match	PCOLCE2	ENST00000295992.7	2021	9	137	9	-5	-9	multi-exon	TRUE	canonical	1	128443	junction_8	35858.660326865254	NA	1	NA	TRUE	NA	NA	NA	A	coding	415	1248	171	1418	45.0	119	False	AATAAA	-11
PB.6372.10	chr2	-	2967	17	novel_not_in_catalog	SLC5A6	novel	2307	3	NA	NA	-28	0	intron_retention	FALSE	canonical	1	17400	junction_10	136800.53542064448	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	335	1327	15.0	-21	True	AATAAA	-19
PB.203.2	chr1	-	1447	5	full-splice_match	GPN2	ENST00000374135.8	4678	5	-17	3248	-17	-5	multi-exon	FALSE	canonical	1	290067	junction_1	33888.364408008834	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	219	1151	20.0	9747	False	AATACA	-16
PB.203.1	chr1	-	2528	7	novel_not_in_catalog	GPN2	novel	4678	5	NA	NA	14	-100	intron_retention	FALSE	non_canonical	0	0	junction_1	154652.295330166	NA	7	2	TRUE	NA	NA	NA	C	coding	310	933	188	1120	90.0	-10	True	NA	NA
PB.9496.20	chr5	+	4096	22	incomplete-splice_match	ANKHD1	ENST00000297183.10	7606	33	21	29378	-15	371	3prime_fragment	FALSE	canonical	1	124883	junction_10	126470.45599863789	NA	0	NA	TRUE	NA	NA	NA	C	coding	1321	3963	134	4096	55.0	2	True	NA	NA
PB.4002.1	chr15	+	1964	6	novel_not_in_catalog	ISL2	novel	1881	6	NA	NA	38	0	any annotated donor/acceptor	FALSE	canonical	1	3471	junction_3	13570.49862901139	NA	0	NA	TRUE	NA	NA	NA	A	coding	521	1566	162	1727	10.0	-11	True	AATAAA	-17
PB.4733.2	chr17	-	1760	8	full-splice_match	PLSCR3	ENST00000535512.5	2067	8	306	1	-2	-1	multi-exon	FALSE	canonical	1	111609	junction_7	152003.10385499048	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	219	1106	40.0	-13	True	TATAAA	-22
PB.4733.3	chr17	-	2742	3	novel_in_catalog	PLSCR3	novel	1689	8	NA	NA	5	0	intron_retention	FALSE	canonical	1	281584	junction_2	84606.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	1518	2033	40.0	9536	False	TATAAA	-20
PB.7110.36	chr2	+	1894	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	2	-74	combination_of_known_junctions	FALSE	canonical	1	72667	junction_1	995167.6462351908	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	194	1279	40.0	-38	True	AATAAA	-17
PB.4733.1	chr17	-	2243	4	novel_in_catalog	PLSCR3	novel	1689	8	NA	NA	17	-1	intron_retention	FALSE	canonical	1	281584	junction_3	141386.5077320558	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	1209	1589	40.0	4	True	TATAAA	-22
PB.7110.30	chr2	+	3163	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	34147	junction_3	1116868.3273856812	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	491	1075	20.0	-40	True	AATAAA	-21
PB.7110.31	chr2	+	2078	13	full-splice_match	SEPT2	ENST00000391971.6	3315	13	45	1192	0	209	multi-exon	FALSE	canonical	1	634146	junction_7	777001.6272450786	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	95	1180	35.0	-40	True	ATTAAA	-14
PB.7110.32	chr2	+	4705	11	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	634146	junction_5	848314.4759437741	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	2034	2618	25.0	-39	True	AATAAA	-20
PB.7110.33	chr2	+	3144	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	56559	junction_2	993125.2929347553	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	474	1058	25.0	-39	True	AATAAA	-19
PB.6990.136	chr2	-	4828	28	incomplete-splice_match	FN1	ENST00000356005.8	7846	44	0	23888	0	-2595	3prime_fragment	FALSE	canonical	1	7013395	junction_27	1046046.4028647261	NA	3	NA	TRUE	NA	NA	NA	C	coding	1495	4488	267	4754	20.0	-1	True	ATTAAA	-18
PB.6115.1	chr19	+	2081	1	genic	EMP3	novel	NA	NA	NA	NA	-68	-4279	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-8895	False	NA	NA
PB.7110.38	chr2	+	3497	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	23820	junction_2	1083609.5830537672	NA	2	1	TRUE	NA	NA	NA	C	coding	361	1086	324	1409	20.0	-34	True	AATAAA	-21
PB.7110.39	chr2	+	3566	16	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	2557	junction_3	1152629.78154592	NA	9	1	TRUE	NA	NA	NA	C	coding	361	1086	394	1479	25.0	-34	True	AATAAA	-20
PB.1660.14	chr10	+	2301	1	incomplete-splice_match	NHLRC2	ENST00000369301.3	11051	11	60229	4	60066	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	35	NA	NA	NA	NA	NA	C	coding	123	372	36	407	30.0	NA	False	ATTAAA	-13
PB.5132.8	chr17	+	2310	11	novel_in_catalog	MSI2	novel	1714	14	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	1	48033	junction_10	146588.4255193431	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	192	959	15.0	1	True	AATAAA	-14
PB.1660.11	chr10	+	2721	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	0	8330	0	-8330	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	213	2393	45.0	0	True	AATAAA	-12
PB.5132.6	chr17	+	2758	14	full-splice_match	MSI2	ENST00000284073.6	6364	14	17	3589	17	799	multi-exon	FALSE	canonical	1	169822	junction_11	109715.02801769262	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	193	1179	75.0	0	True	NA	NA
PB.5132.7	chr17	+	2041	14	full-splice_match	MSI2	ENST00000284073.6	6364	14	17	4306	17	82	multi-exon	FALSE	canonical	1	169822	junction_11	109715.02801769262	NA	2	NA	TRUE	NA	NA	NA	C	coding	328	987	193	1179	55.0	0	True	AATACA	-23
PB.5132.4	chr17	+	3417	13	novel_in_catalog	MSI2	novel	1714	14	NA	NA	8	1522	no_combination_of_known_junctions	FALSE	canonical	1	40574	junction_12	157366.82334269898	NA	2	NA	TRUE	NA	NA	NA	C	coding	328	987	202	1188	90.0	-9	True	CATAAA	-24
PB.5132.5	chr17	+	3255	15	novel_not_in_catalog	MSI2	novel	1714	14	NA	NA	17	1521	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	156571.02607099267	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	193	1179	85.0	0	True	CATAAA	-23
PB.5132.2	chr17	+	3309	14	full-splice_match	MSI2	ENST00000284073.6	6364	14	189	2866	-17	1522	multi-exon	FALSE	canonical	1	169822	junction_11	109715.02801769262	NA	3	NA	TRUE	NA	NA	NA	C	coding	328	987	21	1007	90.0	-725	False	CATAAA	-24
PB.5132.3	chr17	+	3360	14	full-splice_match	MSI2	ENST00000284073.6	6364	14	7	2997	7	1391	multi-exon	TRUE	canonical	1	169822	junction_11	109715.02801769262	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	203	1189	5.0	-10	True	AATAAA	-19
PB.5132.1	chr17	+	3461	14	novel_in_catalog	MSI2	novel	1714	14	NA	NA	91	1522	combination_of_known_junctions	FALSE	canonical	1	114280	junction_11	120983.57094480314	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	119	1159	90.0	-823	False	CATAAA	-24
PB.701.4	chr1	+	8755	17	full-splice_match	PDE4DIP	ENST00000529945.2	8824	17	61	8	61	-8	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	1116	3351	380	3730	35.0	28	True	AATAAA	-14
PB.469.12	chr1	-	3868	12	full-splice_match	DEPDC1	ENST00000456315.6	5331	12	32	1431	0	-9	multi-exon	FALSE	canonical	1	16198	junction_7	38525.65264258595	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	84	2519	20.0	-1	True	AATAAA	-14
PB.240.11	chr1	-	3697	20	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-11	72	no_combination_of_known_junctions	FALSE	canonical	1	5771	junction_15	162860.7056938953	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3129	112	3240	80.0	1	True	NA	NA
PB.7433.9	chr20	+	3672	6	full-splice_match	PCMTD2	ENST00000308824.10	3843	6	-19	190	0	-190	multi-exon	FALSE	canonical	1	89660	junction_1	126483.499160009	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	147	1232	25.0	1	True	AATAAA	-38
PB.6955.4	chr2	+	5453	8	full-splice_match	FAM117B	ENST00000392238.2	5763	8	309	1	8	-1	multi-exon	FALSE	canonical	1	83934	junction_1	15585.455387400558	NA	3	NA	TRUE	NA	NA	NA	C	coding	345	1038	424	1461	15.0	-8589	False	AATAAA	-15
PB.9819.2	chr6	-	2444	5	full-splice_match	ZKSCAN4	ENST00000377294.2	2375	5	-77	8	-77	-8	multi-exon	FALSE	canonical	1	27327	junction_4	16853.123202762745	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	322	1959	35.0	6909	False	AATAAA	-38
PB.1264.9	chr10	-	4248	18	full-splice_match	LARP4B	ENST00000612396.4	8546	18	0	4298	0	594	multi-exon	FALSE	canonical	1	116101	junction_17	77939.69091858415	NA	2	NA	TRUE	NA	NA	NA	C	coding	738	2217	318	2534	20.0	-2	True	GATAAA	-23
PB.9819.1	chr6	-	3358	5	full-splice_match	ZKSCAN4	ENST00000377294.2	2375	5	-43	-940	-43	940	multi-exon	FALSE	canonical	1	27327	junction_4	16853.123202762745	NA	81	1	TRUE	NA	NA	NA	C	coding	545	1638	288	1925	90.0	-2	True	NA	NA
PB.1264.4	chr10	-	6020	18	novel_in_catalog	LARP4B	novel	1826	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	58532	junction_1	105264.0177612405	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	317	2638	15.0	-1	True	AATAAA	-17
PB.1264.5	chr10	-	5918	18	full-splice_match	LARP4B	ENST00000612396.4	8546	18	-2	2630	-2	-2	multi-exon	FALSE	canonical	1	116101	junction_17	77939.69091858415	NA	2	NA	TRUE	NA	NA	NA	C	coding	738	2217	320	2536	15.0	-4	True	AATAAA	-17
PB.1264.6	chr10	-	5433	18	full-splice_match	LARP4B	ENST00000612396.4	8546	18	-3	3116	-3	-488	multi-exon	FALSE	canonical	1	116101	junction_17	77939.69091858415	NA	4	NA	TRUE	NA	NA	NA	C	coding	738	2217	321	2537	40.0	-5	True	AATAAA	-20
PB.1264.7	chr10	-	4667	18	full-splice_match	LARP4B	ENST00000612396.4	8546	18	-8	3887	-8	1005	multi-exon	FALSE	canonical	1	116101	junction_17	77939.69091858415	NA	2	NA	TRUE	NA	NA	NA	C	coding	738	2217	326	2542	85.0	-10	True	TTTAAA	-42
PB.6955.3	chr2	+	2448	9	novel_not_in_catalog	FAM117B	novel	5763	8	NA	NA	-198	-3313	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	40684.1380784637	NA	3	1	TRUE	NA	NA	NA	C	coding	345	1038	731	1768	20.0	12	True	ATTAAA	-16
PB.7043.33	chr2	-	2026	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-10	no_combination_of_known_junctions	FALSE	canonical	1	2031	junction_1	627272.2062086909	NA	2	1	TRUE	NA	NA	NA	C	coding	369	1110	213	1322	45.0	-3	True	AATAAA	-14
PB.7043.32	chr2	-	2269	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-10	any annotated donor/acceptor	FALSE	canonical	1	399	junction_2	731272.9082627002	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	211	1377	45.0	-1	True	AATAAA	-14
PB.7043.31	chr2	-	2409	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-10	any annotated donor/acceptor	FALSE	canonical	1	179	junction_3	731094.9574909314	NA	1	1	TRUE	NA	NA	NA	C	coding	365	1098	213	1310	45.0	-3	True	AATAAA	-14
PB.7043.30	chr2	-	4597	9	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-10	any annotated donor/acceptor	FALSE	canonical	1	167	junction_7	706719.9541072542	NA	4	NA	TRUE	NA	NA	NA	C	coding	315	948	2946	3893	45.0	-3	True	AATAAA	-14
PB.7043.37	chr2	-	1973	9	full-splice_match	SERPINE2	ENST00000409304.5	2161	9	2	186	2	-145	multi-exon	FALSE	canonical	1	893005	junction_8	460077.7290179991	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	211	1404	70.0	-1	True	NA	NA
PB.7043.36	chr2	-	2127	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-110	any annotated donor/acceptor	FALSE	canonical	1	687	junction_6	847253.3576465385	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	213	1523	15.0	-3	True	AATAAA	-28
PB.7043.35	chr2	-	2101	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-105	any annotated donor/acceptor	FALSE	canonical	1	327	junction_9	797906.6453182739	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	299	1492	5.0	-1	True	AATAAA	-33
PB.7043.34	chr2	-	1997	9	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-104	any annotated donor/acceptor	FALSE	canonical	1	528	junction_8	679822.7140712404	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	194	1387	5.0	-1	True	AATAAA	-34
PB.5491.4	chr18	+	5816	27	full-splice_match	WDR7	ENST00000357574.7	7213	27	2	1395	2	1103	multi-exon	FALSE	canonical	1	65863	junction_1	18703.996766979286	NA	0	NA	TRUE	NA	NA	NA	C	coding	1457	4374	234	4607	60.0	0	True	NA	NA
PB.6955.1	chr2	+	2394	9	novel_not_in_catalog	FAM117B	novel	5763	8	NA	NA	-210	-3309	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	40684.1380784637	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	211	1710	15.0	0	True	ATTAAA	-20
PB.5491.2	chr18	+	7209	27	full-splice_match	WDR7	ENST00000357574.7	7213	27	0	4	0	2	multi-exon	FALSE	canonical	1	65863	junction_1	18703.996766979286	NA	1	NA	TRUE	NA	NA	NA	C	coding	1457	4374	236	4609	25.0	-2	True	AATAAA	-30
PB.5491.3	chr18	+	3459	20	incomplete-splice_match	WDR7	ENST00000357574.7	7213	27	2	149847	2	-58716	3prime_fragment	FALSE	canonical	1	65863	junction_1	18537.964969129593	NA	0	NA	TRUE	NA	NA	NA	C	coding	1075	3225	234	3458	60.0	0	True	NA	NA
PB.5491.1	chr18	+	3009	12	incomplete-splice_match	WDR7	ENST00000357574.7	7213	27	-18	332171	0	1145	3prime_fragment	FALSE	canonical	1	65863	junction_1	15991.69580730538	NA	2	NA	TRUE	NA	NA	NA	C	coding	528	1587	254	1840	30.0	-20	True	AATAAA	-16
PB.11441.10	chr9	+	4071	3	novel_not_in_catalog	PDCD1LG2	novel	2365	7	NA	NA	6494	-32567	any annotated donor/acceptor	FALSE	canonical	1	5257	junction_1	28696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	11	592	95.0	3	True	NA	NA
PB.11650.7	chr9	-	4225	4	full-splice_match	ZNF484	ENST00000332591.6	2836	4	4	-1393	4	355	multi-exon	FALSE	canonical	1	13556	junction_3	22626.040224091845	NA	2	NA	TRUE	NA	NA	NA	C	coding	816	2451	223	2673	25.0	19	True	NA	NA
PB.11650.6	chr9	-	4293	5	full-splice_match	ZNF484	ENST00000375495.7	2867	5	-33	-1393	-3	355	multi-exon	FALSE	canonical	1	21942	junction_4	18600.481786434997	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	183	2741	25.0	-4	True	NA	NA
PB.3402.2	chr14	-	6513	5	full-splice_match	KLHL28	ENST00000396128.8	6545	5	6	26	6	-26	multi-exon	FALSE	canonical	1	71412	junction_2	16539.653629610868	NA	6	NA	TRUE	NA	NA	NA	C	coding	571	1716	115	1830	70.0	-13	True	NA	NA
PB.3402.3	chr14	-	2862	1	incomplete-splice_match	KLHL28	ENST00000396128.8	6545	5	34759	26	33926	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	1471	False	NA	NA
PB.12376.3	chrY	+	1892	2	incomplete-splice_match	AKAP17A	ENST00000474361.6_PAR_Y	3232	6	8551	-14	8549	2	5prime_fragment	FALSE	canonical	1	55	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	8	970	35.0	NA	False	AATAAA	-19
PB.12376.2	chrX	+	2374	1	genic	AKAP17A	novel	NA	NA	NA	NA	8518	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	227	684	336	1019	35.0	8483	False	AATAAA	-19
PB.12376.1	chrY	+	3696	5	incomplete-splice_match	AKAP17A	ENST00000474361.6_PAR_Y	3232	6	1	-14	-1	2	intron_retention	FALSE	canonical	1	52	junction_1	509.82619587463336	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	166	1323	35.0	NA	False	AATAAA	-19
PB.3402.7	chr14	-	1816	3	incomplete-splice_match	KLHL28	ENST00000396128.8	6545	5	11	9432	11	-4938	3prime_fragment	FALSE	canonical	1	96720	junction_1	8322.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	110	1465	25.0	-8	True	AATAAA	-14
PB.73.3	chr1	+	5557	5	full-splice_match	H6PD	ENST00000377403.6	9146	5	156	3433	156	6	multi-exon	FALSE	canonical	1	60280	junction_1	49428.337405657294	NA	5	NA	TRUE	NA	NA	NA	C	coding	783	2352	171	2522	20.0	0	True	NA	NA
PB.73.2	chr1	+	3482	5	full-splice_match	H6PD	ENST00000377403.6	9146	5	-12	5676	-12	-2237	multi-exon	FALSE	canonical	1	60280	junction_1	49428.337405657294	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	339	2690	60.0	-8063	False	NA	NA
PB.73.1	chr1	+	3513	6	novel_not_in_catalog	H6PD	novel	9146	5	NA	NA	167	340	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	71440.67173928308	NA	2	1	TRUE	NA	NA	NA	C	coding	783	2352	160	2511	100.0	-10008	False	NA	NA
PB.8735.7	chr4	-	2658	2	full-splice_match	TLR1	ENST00000508364.1	605	2	414	-2467	-248	-11	multi-exon	FALSE	canonical	1	492	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	121	2481	40.0	-10	True	ATTAAA	-9
PB.2792.1	chr12	+	3126	1	full-splice_match	AC024909.2	ENST00000611513.1	2257	1	-876	7	-876	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	139	420	418	837	40.0	-4334	False	ATTAAA	-17
PB.73.4	chr1	+	5025	6	novel_not_in_catalog	H6PD	novel	9146	5	NA	NA	5	-4	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	71440.67173928308	NA	3	1	TRUE	NA	NA	NA	C	coding	783	2352	322	2673	30.0	6	True	AATAAA	-12
PB.1710.12	chr10	-	2996	5	novel_not_in_catalog	C10orf90	novel	1595	6	NA	NA	-64	33746	any annotated donor/acceptor	FALSE	canonical	1	77	junction_1	3336.695174495267	NA	0	NA	TRUE	NA	NA	NA	B	coding	514	1545	31	1575	15.0	-1	True	AATAAA	-19
PB.1710.13	chr10	-	2727	5	novel_not_in_catalog	C10orf90	novel	1595	6	NA	NA	19	33746	any annotated donor/acceptor	FALSE	canonical	1	261	junction_1	3258.1021603841705	NA	3	NA	TRUE	NA	NA	NA	B	coding	588	1767	71	1837	15.0	0	True	AATAAA	-19
PB.1710.10	chr10	-	1863	7	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	16	0	no_combination_of_known_junctions	FALSE	canonical	1	848	junction_6	5071.766076909392	NA	1	NA	TRUE	NA	NA	NA	B	coding	518	1554	310	1863	80.0	-3	True	NA	NA
PB.1710.11	chr10	-	2376	10	novel_not_in_catalog	C10orf90	novel	1595	6	NA	NA	18	-1	any annotated donor/acceptor	FALSE	canonical	1	182	junction_8	5244.60393589873	NA	0	NA	TRUE	NA	NA	NA	B	coding	704	2112	263	2374	75.0	-1	True	NA	NA
PB.1710.14	chr10	-	2691	5	novel_not_in_catalog	C10orf90	novel	1595	6	NA	NA	14	33744	any annotated donor/acceptor	FALSE	canonical	1	236	junction_1	3268.7774855440985	NA	1	NA	TRUE	NA	NA	NA	B	coding	575	1728	76	1803	20.0	-5	True	AATAAA	-17
PB.1710.15	chr10	-	2458	5	novel_not_in_catalog	C10orf90	novel	1595	6	NA	NA	-3	33494	any annotated donor/acceptor	FALSE	canonical	1	236	junction_1	3268.7774855440985	NA	0	NA	TRUE	NA	NA	NA	B	coding	575	1728	93	1820	5.0	-1	True	ATTAAA	-17
PB.764.2	chr1	+	3379	22	full-splice_match	NPR1	ENST00000368680.3	4236	22	856	1	856	-1	multi-exon	FALSE	canonical	1	52756	junction_7	13547.713302040522	NA	1	NA	TRUE	NA	NA	NA	C	coding	878	2637	166	2802	15.0	-644	False	ATTAAA	-16
PB.764.1	chr1	+	4042	23	novel_not_in_catalog	NPR1	novel	4236	22	NA	NA	-352	-2	any annotated donor/acceptor	TRUE	canonical	1	1854	junction_1	20929.65837124892	NA	7	1	TRUE	NA	NA	NA	C	coding	1061	3186	281	3466	15.0	-4	True	ATTAAA	-15
PB.10936.9	chr7	+	1802	3	novel_not_in_catalog	CHPF2	novel	2709	5	NA	NA	3058	2151	intron_retention	FALSE	canonical	1	56121	junction_2	1338.5	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	4909	False	NA	NA
PB.8092.26	chr3	-	2485	14	full-splice_match	PFKFB4	ENST00000232375.7	3586	14	25	1076	25	914	multi-exon	FALSE	canonical	1	126644	junction_13	38641.191619349855	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	89	1498	25.0	9372	False	CATAAA	-9
PB.6990.132	chr2	-	5285	32	incomplete-splice_match	FN1	ENST00000356005.8	7846	44	2	18322	1	17	3prime_fragment	FALSE	canonical	1	3539696	junction_1	1464293.460265591	NA	0	NA	TRUE	NA	NA	NA	C	coding	1673	5019	265	5283	50.0	1	True	NA	NA
PB.10936.8	chr7	+	2164	3	novel_in_catalog	CHPF2	novel	548	2	NA	NA	-1321	0	no_combination_of_known_junctions	FALSE	canonical	1	44313	junction_2	239927.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	318	2018	30.0	530	False	ATTAAA	-22
PB.7693.4	chr22	+	5895	19	full-splice_match	MTMR3	ENST00000323630.9	5866	19	-30	1	-1	-1	multi-exon	FALSE	canonical	1	20094	junction_2	54190.70921625876	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3189	651	3839	25.0	-13	True	NA	NA
PB.7693.5	chr22	+	4165	20	full-splice_match	MTMR3	ENST00000401950.6	6018	20	19	1834	5	9	multi-exon	FALSE	canonical	1	144829	junction_17	36052.87367625207	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	324	3920	15.0	-7	True	AAAAAG	-23
PB.7693.6	chr22	+	5966	20	full-splice_match	MTMR3	ENST00000401950.6	6018	20	30	22	6	0	multi-exon	FALSE	canonical	1	144829	junction_17	36052.87367625207	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	313	3909	25.0	4	True	NA	NA
PB.7693.7	chr22	+	5741	20	full-splice_match	MTMR3	ENST00000401950.6	6018	20	49	228	6	-206	multi-exon	FALSE	canonical	1	144829	junction_17	36052.87367625207	NA	23	1	TRUE	NA	NA	NA	C	coding	1198	3597	294	3890	25.0	-1378	False	AATAAA	-25
PB.10319.1	chr6	-	2142	1	full-splice_match	AL139393.2	ENST00000608721.1	2025	1	-116	-1	-116	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-11	True	AATAAA	-20
PB.7693.1	chr22	+	8643	20	full-splice_match	MTMR3	ENST00000401950.6	6018	20	0	-2625	0	-361	multi-exon	FALSE	canonical	1	144829	junction_17	36052.87367625207	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	343	3939	25.0	-1427	False	AATAAA	-19
PB.7693.2	chr22	+	6042	21	novel_in_catalog	MTMR3	novel	6018	20	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	60553	junction_20	54416.71663643444	NA	2	NA	TRUE	NA	NA	NA	C	coding	1207	3624	343	3966	10.0	-1427	False	NA	NA
PB.7693.3	chr22	+	5885	19	full-splice_match	MTMR3	ENST00000351488.7	4464	19	-58	-1363	0	0	multi-exon	FALSE	canonical	1	54375	junction_17	48731.698277277945	NA	0	NA	TRUE	NA	NA	NA	C	coding	1161	3486	343	3828	25.0	-1427	False	NA	NA
PB.6550.2	chr2	+	2559	13	full-splice_match	SMYD5	ENST00000389501.8	2593	13	23	11	7	-11	multi-exon	FALSE	canonical	1	103563	junction_1	67451.63678394568	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	23	1279	15.0	0	True	AATAAA	-19
PB.6550.1	chr2	+	2647	12	incomplete-splice_match	SMYD5	ENST00000389501.8	2593	13	23	17	7	-17	intron_retention	FALSE	canonical	1	103563	junction_1	69157.66975207588	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	23	1273	25.0	0	True	AATAAA	-13
PB.8080.22	chr3	-	4383	28	full-splice_match	SMARCC1	ENST00000254480.9	6375	28	17	1975	17	343	multi-exon	FALSE	canonical	1	438864	junction_27	147698.30735901746	NA	1	NA	TRUE	NA	NA	NA	C	coding	1105	3318	104	3421	80.0	-8	True	TTTAAA	-10
PB.852.45	chr1	-	4191	33	full-splice_match	COPA	ENST00000368069.7	4664	33	-27	500	-2	8	multi-exon	FALSE	canonical	1	63048	junction_17	380322.4268874934	NA	1	NA	TRUE	NA	NA	NA	C	coding	1233	3702	106	3807	65.0	-29	True	NA	NA
PB.10936.7	chr7	+	2396	4	full-splice_match	CHPF2	ENST00000035307.6	3978	4	1574	8	-1378	0	multi-exon	FALSE	canonical	1	332326	junction_3	80839.91701436171	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	375	2258	25.0	473	False	ATTAAA	-14
PB.8848.5	chr4	-	2288	9	full-splice_match	HNRNPDL	ENST00000630827.1	1318	9	-23	-947	-14	941	multi-exon	FALSE	canonical	1	9753	junction_8	1723146.7169990153	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	161	1066	20.0	-10	True	AATAAA	-14
PB.10936.6	chr7	+	5560	2	incomplete-splice_match	CHPF2	ENST00000035307.6	3978	4	-6	2	4	-2	intron_retention	FALSE	canonical	1	524168	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	4421	5416	30.0	-6	True	ATTAAA	-20
PB.8848.4	chr4	-	2807	9	full-splice_match	HNRNPDL	ENST00000349655.8	1402	9	9	-1414	3	-650	multi-exon	FALSE	canonical	1	289954	junction_1	1681340.0085949628	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	106	1011	55.0	-1	True	AATAAA	-9
PB.8848.2	chr4	-	3870	7	full-splice_match	HNRNPDL	ENST00000507721.5	2404	7	-45	-1421	-1	-639	multi-exon	FALSE	canonical	1	2760139	junction_1	603702.1009661048	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	110	1015	35.0	-5	True	AATAAA	-20
PB.3217.1	chr13	+	1724	1	novel_in_catalog	MIR17HG	novel	931	4	NA	NA	3443	706	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.4511.1	chr16	+	4891	18	full-splice_match	TANGO6	ENST00000261778.1	4816	18	-75	0	-73	0	multi-exon	FALSE	canonical	1	55936	junction_1	16400.905245714115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	88	3372	35.0	-10	True	AATAAA	-26
PB.4511.2	chr16	+	3919	18	full-splice_match	TANGO6	ENST00000261778.1	4816	18	-72	969	-70	365	multi-exon	FALSE	canonical	1	55936	junction_1	16400.905245714115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	85	3369	45.0	-7	True	AATAAA	-15
PB.4511.3	chr16	+	3737	17	novel_in_catalog	TANGO6	novel	1764	4	NA	NA	-65	365	no_combination_of_known_junctions	FALSE	canonical	1	2397	junction_8	28185.069742726268	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	80	3187	45.0	-2	True	AATAAA	-15
PB.4511.4	chr16	+	6193	18	full-splice_match	TANGO6	ENST00000261778.1	4816	18	-60	-1317	-58	1317	multi-exon	FALSE	canonical	1	55936	junction_1	16400.905245714115	NA	2	NA	TRUE	NA	NA	NA	C	coding	1094	3285	73	3357	40.0	5	True	NA	NA
PB.9315.25	chr5	+	3283	13	novel_in_catalog	TENT2	novel	781	5	NA	NA	-17	-8	intron_retention	FALSE	canonical	1	933	junction_12	132574.16060546282	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	646	1857	15.0	27	True	AATAAA	-13
PB.11543.5	chr9	+	1892	9	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	-30	-2	any annotated donor/acceptor	FALSE	canonical	1	46670	junction_1	85030.37414065635	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	144	1772	30.0	1	True	AATAAA	-25
PB.11543.6	chr9	+	2619	9	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	2	1	any annotated donor/acceptor	FALSE	canonical	1	46670	junction_1	85030.37414065635	NA	1	1	TRUE	NA	NA	NA	C	coding	542	1629	112	1740	30.0	-9826	False	AATAAA	-14
PB.11543.7	chr9	+	2557	8	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	-28	0	any annotated donor/acceptor	FALSE	canonical	1	312	junction_5	114166.6521110473	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	87	1679	35.0	-4	True	AATAAA	-13
PB.6206.1	chr19	+	1389	5	full-splice_match	TSEN34	ENST00000302937.8	2294	5	34	871	34	-1	multi-exon	FALSE	canonical	1	108377	junction_1	290157.7075940772	NA	6	NA	TRUE	NA	NA	NA	C	coding	310	933	154	1086	20.0	1	True	NA	NA
PB.11543.1	chr9	+	1940	8	novel_in_catalog	ZCCHC7	novel	2619	9	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	10677	junction_1	88029.89457460646	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	301	1062	35.0	10	True	AATAAA	-13
PB.6206.3	chr19	+	2203	4	full-splice_match	TSEN34	ENST00000396388.2	1349	4	10	-864	10	-6	multi-exon	FALSE	canonical	1	610514	junction_1	111029.17085863317	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	103	1035	20.0	-45	True	NA	NA
PB.6206.2	chr19	+	1347	4	full-splice_match	TSEN34	ENST00000396388.2	1349	4	1	1	1	-1	multi-exon	FALSE	canonical	1	610514	junction_1	111029.17085863317	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	112	1044	20.0	-54	True	NA	NA
PB.5009.1	chr17	+	1205	7	full-splice_match	IFI35	ENST00000415816.6	1241	7	38	-2	-22	2	multi-exon	FALSE	canonical	1	173547	junction_4	135173.60937132742	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	186	1046	15.0	-22	True	AGTAAA	-19
PB.11543.9	chr9	+	3595	9	novel_in_catalog	ZCCHC7	novel	2619	9	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	8063	junction_1	93543.3545881768	NA	2	NA	TRUE	NA	NA	NA	C	coding	542	1629	1090	2718	35.0	34	True	AATAAA	-12
PB.5009.2	chr17	+	2128	4	novel_in_catalog	IFI35	novel	1241	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	420857	junction_3	38280.382393887114	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	1487	1972	15.0	-5	True	AGTAAA	-16
PB.10603.5	chr7	+	2468	15	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	-2	-1	any annotated donor/acceptor	TRUE	canonical	1	418	junction_2	241297.50797529327	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	784	1563	20.0	-2	True	AATAAA	-17
PB.2273.11	chr11	-	5040	2	novel_not_in_catalog	POU2AF1	novel	3295	5	NA	NA	-3029	819	any annotated donor/acceptor	FALSE	canonical	1	150	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	110	333	3857	4189	20.0	-7938	False	NA	NA
PB.2273.10	chr11	-	1334	5	full-splice_match	POU2AF1	ENST00000393067.7	3295	5	417	1544	0	741	multi-exon	FALSE	canonical	1	325693	junction_2	38121.87236023435	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	99	869	15.0	-1	True	NA	NA
PB.2273.12	chr11	-	2321	2	novel_not_in_catalog	POU2AF1	novel	3295	5	NA	NA	0	10600	intron_retention	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	115	348	1	348	100.0	-1	True	NA	NA
PB.5188.1	chr17	-	2506	1	genic	SMURF2	novel	NA	NA	NA	NA	18372	7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	6907	False	AATAAA	-39
PB.6524.10	chr2	-	4876	20	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	-1	-3917	any annotated donor/acceptor	FALSE	canonical	1	1761	junction_19	221961.30158503776	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	264	2384	90.0	0	True	NA	NA
PB.6524.11	chr2	-	4608	18	novel_in_catalog	GFPT1	novel	8703	20	NA	NA	-1	-3917	no_combination_of_known_junctions	FALSE	canonical	1	1404	junction_17	192197.94170406787	NA	11	2	TRUE	NA	NA	NA	C	coding	645	1938	179	2116	90.0	0	True	NA	NA
PB.6524.12	chr2	-	4549	18	novel_in_catalog	GFPT1	novel	8703	20	NA	NA	0	-3917	no_combination_of_known_junctions	FALSE	canonical	1	2550	junction_2	194884.69196350273	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	180	2057	90.0	-1	True	NA	NA
PB.2380.10	chr11	+	3302	9	novel_in_catalog	ACAD8	novel	2249	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	24711	junction_2	103247.03081437439	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	162	674	45.0	-4	True	AATAAA	-22
PB.7172.1	chr20	+	3729	10	full-splice_match	ANKEF1	ENST00000378380.4	5303	10	34	1540	34	936	multi-exon	FALSE	canonical	1	30879	junction_5	9968.530951616358	NA	5	1	TRUE	NA	NA	NA	A	coding	776	2331	296	2626	35.0	1	True	NA	NA
PB.3207.1	chr13	+	2379	1	antisense	novelGene_EDNRB_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6524.17	chr2	-	4588	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	-32	4076	-26	-4076	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	210	2255	60.0	27	False	NA	NA
PB.6524.19	chr2	-	4135	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	-2	4499	0	-4499	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	180	2225	30.0	-1	True	TTTAAA	-42
PB.7288.2	chr20	+	1588	4	novel_in_catalog	SNHG11	novel	1322	4	NA	NA	-13	-8	intron_retention	FALSE	canonical	1	34688	junction_2	63909.998576122656	NA	1	NA	TRUE	NA	NA	NA	B	coding	108	324	1264	1587	20.0	0	True	AATAAA	-6
PB.7068.35	chr2	-	2859	14	novel_in_catalog	NCL	novel	4034	14	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	1	8280	junction_13	2213980.5203611283	NA	3	NA	TRUE	NA	NA	NA	C	coding	694	2085	495	2579	25.0	20	True	NA	NA
PB.4220.3	chr16	-	2157	6	full-splice_match	CDIP1	ENST00000563332.6	2774	6	-13	630	-13	19	multi-exon	FALSE	canonical	1	62592	junction_5	141854.11748497115	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	264	890	0.0	-1	True	ATTAAA	-41
PB.4220.2	chr16	-	2760	6	full-splice_match	CDIP1	ENST00000563332.6	2774	6	-52	66	-52	-2	multi-exon	FALSE	canonical	1	62592	junction_5	141854.11748497115	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	303	929	40.0	305	False	AATAAA	-12
PB.4220.1	chr16	-	2711	6	full-splice_match	CDIP1	ENST00000567695.5	2062	6	-51	-598	-7	13	multi-exon	FALSE	canonical	1	182611	junction_2	107411.97499348012	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	239	865	50.0	-8	False	AATAAA	-27
PB.7288.3	chr20	+	3211	2	incomplete-splice_match	SNHG11	ENST00000483342.5	1509	4	-13	1	-13	-1	intron_retention	FALSE	canonical	1	119987	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	110	330	2880	3209	5.0	0	True	AATAAA	-13
PB.4220.4	chr16	-	2073	6	full-splice_match	CDIP1	ENST00000567695.5	2062	6	7	-18	-2	18	multi-exon	FALSE	canonical	1	182611	junction_2	107411.97499348012	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	181	807	0.0	-5	True	ATTAAA	-40
PB.7288.4	chr20	+	2646	2	incomplete-splice_match	SNHG11	ENST00000444816.1	621	3	-1939	-1	-13	1	intron_retention	FALSE	canonical	1	156983	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	111	333	2313	2645	5.0	0	True	AATAAA	-15
PB.7288.5	chr20	+	1659	3	novel_in_catalog	SNHG11	novel	1322	4	NA	NA	2	-1	intron_retention	FALSE	canonical	1	34688	junction_2	42649.5	NA	1	1	TRUE	NA	NA	NA	B	coding	110	330	1328	1657	5.0	21	True	AATAAA	-13
PB.3151.42	chr13	-	1993	2	full-splice_match	LCP1	ENST00000460190.1	765	2	22	-1250	22	1090	multi-exon	FALSE	canonical	1	1963481	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-8	True	NA	NA
PB.3151.40	chr13	-	2138	16	full-splice_match	LCP1	ENST00000323076.6	3787	16	143	1506	23	-1506	multi-exon	FALSE	canonical	1	1963481	junction_15	685358.7765944167	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	96	1979	40.0	-7	True	AAAAAG	-38
PB.3151.41	chr13	-	1801	15	incomplete-splice_match	LCP1	ENST00000323076.6	3787	16	151	4925	31	-4925	3prime_fragment	FALSE	canonical	1	1963481	junction_14	709404.0859174605	NA	1	1	TRUE	NA	NA	NA	C	coding	571	1713	88	1800	45.0	1	True	NA	NA
PB.2773.12	chr12	+	2085	10	incomplete-splice_match	ZDHHC17	ENST00000426126.6	5259	17	670	24241	0	2439	3prime_fragment	FALSE	canonical	1	152053	junction_3	76273.53449377339	NA	1	NA	TRUE	NA	NA	NA	B	coding	375	1128	10	1137	100.0	0	True	NA	NA
PB.1225.14	chr1	+	2360	11	novel_in_catalog	LGALS8	novel	799	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	1477	junction_1	180241.9605447355	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	306	1256	20.0	0	True	ATTAAA	-22
PB.2773.10	chr12	+	3292	17	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	0	1004	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	85052.57132243912	NA	1	1	TRUE	NA	NA	NA	B	coding	623	1872	10	1881	5.0	0	True	TATAAA	-20
PB.2773.11	chr12	+	2913	13	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	0	2383	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	105589.78228512849	NA	2	1	TRUE	NA	NA	NA	B	coding	256	771	10	780	80.0	0	True	NA	NA
PB.2386.12	chr12	+	4001	5	incomplete-splice_match	WNK1	ENST00000315939.10	10452	28	143372	1	-328	0	5prime_fragment	FALSE	canonical	1	861277	junction_2	62263.93189680523	NA	0	NA	TRUE	NA	NA	NA	B	coding	401	1206	137	1342	10.0	NA	False	AATAAA	-19
PB.8281.6	chr3	-	3788	19	novel_in_catalog	CBLB	novel	6749	19	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	1	65035	junction_18	42127.74459407165	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	136	3084	15.0	368	False	AATAAA	-32
PB.2773.14	chr12	+	3351	6	incomplete-splice_match	ZDHHC17	ENST00000426126.6	5259	17	79329	-5	-997	5	5prime_fragment	FALSE	canonical	1	141206	junction_1	60987.15177281195	NA	1	NA	TRUE	NA	NA	NA	B	coding	150	453	183	635	25.0	NA	False	AATAAA	-19
PB.1225.12	chr1	+	3142	10	novel_not_in_catalog	LGALS8	novel	799	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2888	junction_9	188806.63114204933	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	186	785	20.0	-2	True	ATTAAA	-20
PB.12029.1	chrX	+	1853	7	full-splice_match	ATP6AP2	ENST00000423649.2	1093	7	-70	-690	2	0	multi-exon	FALSE	canonical	1	19055	junction_3	405238.0926264898	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	155	973	25.0	-129	False	AATAAA	-17
PB.12029.2	chrX	+	1938	8	full-splice_match	ATP6AP2	ENST00000637327.1	1929	8	19	-28	-8	-1	multi-exon	FALSE	canonical	1	20448	junction_1	395811.27186278143	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	235	1059	30.0	-41	True	AATAAA	-16
PB.12029.3	chrX	+	1972	8	full-splice_match	ATP6AP2	ENST00000636409.1	1962	8	37	-47	-6	0	multi-exon	FALSE	canonical	1	17831	junction_3	402192.31915513723	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	136	1092	25.0	-39	True	AATAAA	-17
PB.12029.4	chrX	+	1830	9	full-splice_match	ATP6AP2	ENST00000636580.1	2337	9	56	451	-6	-69	multi-exon	FALSE	canonical	1	591070	junction_1	222490.81524862998	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	136	1188	30.0	-39	True	ACTAAA	-28
PB.12029.5	chrX	+	2028	9	full-splice_match	ATP6AP2	ENST00000636580.1	2337	9	95	214	0	-1	multi-exon	FALSE	canonical	1	591070	junction_1	222490.81524862998	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	97	1149	30.0	0	True	AATAAA	-16
PB.12029.6	chrX	+	1298	9	full-splice_match	ATP6AP2	ENST00000636580.1	2337	9	74	965	0	-4	multi-exon	FALSE	canonical	1	591070	junction_1	222490.81524862998	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	118	1170	10.0	-21	True	TATAAA	-23
PB.12029.7	chrX	+	2003	9	novel_not_in_catalog	ATP6AP2	novel	554	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	377296.6691755143	NA	2	1	TRUE	NA	NA	NA	C	coding	301	906	219	1124	30.0	0	True	AATAAA	-16
PB.5015.6	chr17	+	3086	8	novel_in_catalog	TMEM106A	novel	913	9	NA	NA	6	-6	intron_retention	FALSE	canonical	1	6235	junction_1	25416.32454601907	NA	3	NA	TRUE	NA	NA	NA	C	coding	262	789	64	852	35.0	6	True	AATAAA	-19
PB.5015.7	chr17	+	2782	8	novel_in_catalog	TMEM106A	novel	913	9	NA	NA	7	-309	intron_retention	FALSE	canonical	1	6235	junction_1	25416.32454601907	NA	5	NA	TRUE	NA	NA	NA	C	coding	262	789	63	851	95.0	7	True	NA	NA
PB.5015.4	chr17	+	2985	9	full-splice_match	TMEM106A	ENST00000612339.4	3266	9	-28	309	12	-309	multi-exon	FALSE	canonical	1	33730	junction_1	16226.331322498625	NA	3	NA	TRUE	NA	NA	NA	C	coding	262	789	266	1054	95.0	-411	False	NA	NA
PB.5015.5	chr17	+	2629	8	novel_in_catalog	TMEM106A	novel	913	9	NA	NA	-2	-471	intron_retention	FALSE	canonical	1	6235	junction_1	25416.32454601907	NA	8	NA	TRUE	NA	NA	NA	C	coding	262	789	72	860	70.0	-2	True	NA	NA
PB.5015.2	chr17	+	3164	10	full-splice_match	TMEM106A	ENST00000541594.5	1330	10	-48	-1786	-8	-6	multi-exon	FALSE	canonical	1	4636	junction_3	25136.130219169812	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	286	930	35.0	-431	False	AATAAA	-19
PB.5015.3	chr17	+	2832	9	full-splice_match	TMEM106A	ENST00000612339.4	3266	9	-37	471	3	-471	multi-exon	FALSE	canonical	1	33730	junction_1	16226.331322498625	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	275	1063	70.0	-420	False	NA	NA
PB.5015.1	chr17	+	3308	9	full-splice_match	TMEM106A	ENST00000612339.4	3266	9	-48	6	-8	-6	multi-exon	FALSE	canonical	1	33730	junction_1	16226.331322498625	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	286	1074	35.0	-431	False	AATAAA	-19
PB.5015.8	chr17	+	2815	6	incomplete-splice_match	TMEM106A	ENST00000612339.4	3266	9	1951	5	782	-5	5prime_fragment	FALSE	canonical	1	65541	junction_2	6602.435441562455	NA	7	NA	TRUE	NA	NA	NA	C	coding	106	321	260	580	30.0	-9437	False	AATAAA	-20
PB.9315.28	chr5	+	3149	17	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	359	junction_8	162844.8889879449	NA	1	1	TRUE	NA	NA	NA	C	coding	230	693	336	1028	15.0	0	True	AATAAA	-13
PB.9315.29	chr5	+	3072	16	full-splice_match	TENT2	ENST00000423041.6	3223	16	143	8	1	-8	multi-exon	FALSE	canonical	1	32616	junction_1	116524.24211803406	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	263	1705	15.0	3	True	AATAAA	-13
PB.11440.10	chr9	+	4045	3	incomplete-splice_match	CD274	ENST00000381577.3	3644	7	17	9545	17	-2236	3prime_fragment	FALSE	canonical	1	70419	junction_1	11091.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	70	483	70.0	0	True	NA	NA
PB.11177.17	chr8	-	2528	5	novel_in_catalog	TRAM1	novel	3394	11	NA	NA	36	177	intron_retention	FALSE	canonical	1	1557926	junction_3	304526.41376190586	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	105	593	90.0	46	True	NA	NA
PB.11131.6	chr8	-	2568	10	novel_in_catalog	TCEA1	novel	2718	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	215	junction_7	68273.37076944584	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	226	1026	35.0	-1	True	AATAAA	-17
PB.9315.20	chr5	+	2870	16	novel_in_catalog	TENT2	novel	781	5	NA	NA	16	13	combination_of_known_junctions	FALSE	canonical	1	42937	junction_1	114798.12223504935	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	422	1864	40.0	10	True	AATAAA	-30
PB.9315.21	chr5	+	2803	16	novel_in_catalog	TENT2	novel	781	5	NA	NA	16	12	combination_of_known_junctions	FALSE	canonical	1	5890	junction_1	118459.44376788013	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	344	1798	35.0	10	True	AATAAA	-29
PB.9315.22	chr5	+	2309	15	full-splice_match	TENT2	ENST00000453514.5	3523	15	31	1183	16	-115	multi-exon	FALSE	canonical	1	181099	junction_6	84288.01064647212	NA	1	1	TRUE	NA	NA	NA	C	coding	484	1455	663	2117	40.0	10	True	AATAAA	-21
PB.9315.23	chr5	+	3320	16	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	22	-6	any annotated donor/acceptor	FALSE	canonical	1	2390	junction_1	119095.02976855641	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	497	1951	10.0	16	True	AATAAA	-15
PB.9315.24	chr5	+	3194	16	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	22	13	intron_retention	FALSE	canonical	1	10438	junction_1	141681.09652166805	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	746	2188	40.0	16	True	AATAAA	-30
PB.10166.1	chr6	-	2222	14	full-splice_match	FYN	ENST00000368682.7	3234	14	50	962	20	-8	multi-exon	FALSE	canonical	1	167497	junction_13	194478.33401352077	NA	1	NA	TRUE	NA	NA	NA	A	coding	534	1605	173	1777	60.0	656	False	AATAAA	-18
PB.9315.26	chr5	+	2039	15	full-splice_match	TENT2	ENST00000453514.5	3523	15	49	1435	-16	-20	multi-exon	FALSE	canonical	1	181099	junction_6	84288.01064647212	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1395	645	2039	60.0	28	True	NA	NA
PB.9315.27	chr5	+	3154	13	novel_in_catalog	TENT2	novel	781	5	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	5549	junction_3	152135.4681687006	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-10	True	AATAAA	-15
PB.10603.4	chr7	+	2098	14	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	1927	junction_2	178287.33269876536	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	465	1196	35.0	0	True	AATAAA	-14
PB.3440.10	chr14	-	2562	6	full-splice_match	GNPNAT1	ENST00000216410.7	3860	6	-83	1381	-16	-18	multi-exon	FALSE	canonical	1	71305	junction_1	76740.04350637285	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	272	826	80.0	-78	True	NA	NA
PB.10603.6	chr7	+	1980	14	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	244421.5708733847	NA	19	2	TRUE	NA	NA	NA	C	coding	254	765	314	1078	35.0	-2	True	AATAAA	-14
PB.10603.7	chr7	+	2087	14	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	6563	junction_10	188320.9696994271	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	355	1185	35.0	-1	True	AATAAA	-14
PB.10603.1	chr7	+	1935	14	full-splice_match	LAT2	ENST00000460943.5	2527	14	588	4	0	-4	multi-exon	FALSE	canonical	1	249039	junction_1	129608.59619023102	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	302	1033	35.0	-3	True	AATAAA	-14
PB.10603.2	chr7	+	1865	14	full-splice_match	LAT2	ENST00000275635.11	1869	14	0	4	0	-4	multi-exon	FALSE	canonical	1	61291	junction_2	165571.9619889307	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	232	963	35.0	-3	True	AATAAA	-14
PB.10603.3	chr7	+	1742	13	full-splice_match	LAT2	ENST00000344995.9	2363	13	614	7	4	-4	multi-exon	FALSE	canonical	1	187735	junction_1	121131.19687645385	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	109	840	35.0	1	True	AATAAA	-14
PB.1509.11	chr10	+	3000	10	incomplete-splice_match	BMPR1A	ENST00000636056.1	3233	13	51198	4553	51121	-4553	internal_fragment	FALSE	canonical	1	20	junction_5	15774.09439634147	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	20	1534	25.0	NA	False	AATAAA	-17
PB.10603.8	chr7	+	2134	15	novel_not_in_catalog	LAT2	novel	585	6	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	418	junction_2	215450.23374127113	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	501	1232	35.0	0	True	AATAAA	-14
PB.10603.9	chr7	+	1885	13	novel_in_catalog	LAT2	novel	585	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	7271	junction_9	195274.80108090624	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	302	637	15.0	-3	True	AATAAA	-20
PB.11131.7	chr8	-	2832	11	novel_in_catalog	TCEA1	novel	2718	9	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	215	junction_7	65732.0891470825	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	527	1291	40.0	-23	True	AATAAA	-16
PB.6403.2	chr2	+	2837	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	6	9106	6	126	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	241	975	55.0	6	True	GATAAA	-19
PB.11131.5	chr8	-	2832	10	novel_in_catalog	TCEA1	novel	2718	9	NA	NA	-40	1	combination_of_known_junctions	FALSE	canonical	1	215	junction_7	66547.90498413739	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	487	1287	30.0	-13	True	AATAAA	-20
PB.10970.4	chr8	+	3393	9	novel_in_catalog	AGPAT5	novel	3685	8	NA	NA	11	-34	no_combination_of_known_junctions	FALSE	canonical	1	3810	junction_2	191040.48963488734	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	508	1149	75.0	-9848	False	NA	NA
PB.11131.1	chr8	-	2499	9	novel_in_catalog	TCEA1	novel	2718	9	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	215	junction_6	44903.98872438144	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	187	945	25.0	-25	True	AATAAA	-29
PB.12075.5	chrX	-	2407	9	novel_in_catalog	WDR45	novel	1432	8	NA	NA	0	-2	intron_retention	FALSE	canonical	1	170861	junction_8	147625.45918133497	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	1491	2246	20.0	-33	True	AATAAA	-16
PB.9769.4	chr6	-	3274	10	novel_in_catalog	DEK	novel	3427	11	NA	NA	0	35	intron_retention	FALSE	canonical	1	691145	junction_9	458996.20342360565	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	167	1309	20.0	-18	True	AATAAA	-15
PB.11131.9	chr8	-	2733	10	novel_not_in_catalog	TCEA1	novel	2718	9	NA	NA	682	-3	any annotated donor/acceptor	FALSE	canonical	1	215	junction_7	68283.44009176333	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	392	1192	40.0	1200	False	AATAAA	-16
PB.11131.8	chr8	-	2354	9	full-splice_match	TCEA1	ENST00000396401.7	2718	9	353	11	53	-3	multi-exon	FALSE	canonical	1	204	junction_8	69325.03065767443	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	13	813	40.0	352	False	AATAAA	-16
PB.12035.3	chrX	-	3878	24	novel_in_catalog	CASK	novel	8361	25	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	40350	junction_7	45151.180096157106	NA	1	NA	TRUE	NA	NA	NA	C	coding	885	2658	15	2672	35.0	-1	True	AATATA	-18
PB.12035.2	chrX	-	3959	25	full-splice_match	CASK	ENST00000644347.1	8361	25	122	4280	1	-3	multi-exon	FALSE	canonical	1	130559	junction_8	35083.01328713877	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	60	2753	35.0	587	False	AATATA	-18
PB.7068.36	chr2	-	2381	14	full-splice_match	NCL	ENST00000322723.8	4034	14	99	1554	99	-177	multi-exon	FALSE	canonical	1	4460275	junction_7	1417435.3388719882	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	143	2275	10.0	-12	True	NA	NA
PB.9550.3	chr5	+	4184	19	full-splice_match	AFAP1L1	ENST00000296721.8	4177	19	-7	0	-7	0	multi-exon	FALSE	canonical	1	27361	junction_1	15526.42202996135	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	106	2412	35.0	5	True	NA	NA
PB.10970.6	chr8	+	3970	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	275	-560	-34	560	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	38	1132	80.0	-10	True	NA	NA
PB.10613.3	chr7	+	3383	15	novel_in_catalog	GTF2IRD2B	novel	484	2	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	167	junction_13	2283.2644818061594	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	199	1278	20.0	-17	False	NA	NA
PB.10613.2	chr7	+	3537	15	novel_in_catalog	GTF2IRD2B	novel	484	2	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	165	junction_5	2262.0956465821055	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	827	3019	20.0	-17	False	NA	NA
PB.10613.1	chr7	+	3617	16	full-splice_match	GTF2IRD2B	ENST00000472837.5	3560	16	-59	2	-51	-2	multi-exon	TRUE	canonical	1	693	junction_5	2150.3433482947685	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	250	3099	20.0	-68	False	NA	NA
PB.9550.1	chr5	+	3555	19	full-splice_match	AFAP1L1	ENST00000296721.8	4177	19	-26	648	-26	-648	multi-exon	TRUE	canonical	1	27361	junction_1	15526.42202996135	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	125	2431	20.0	-67	False	AATAAA	-20
PB.11736.14	chr9	+	2685	14	novel_not_in_catalog	PRPF4	novel	3212	14	NA	NA	48	-90	any annotated donor/acceptor	FALSE	canonical	1	8159	junction_7	121824.99910646396	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	820	1659	30.0	32	True	NA	NA
PB.9597.1	chr5	+	1533	11	full-splice_match	UBLCP1	ENST00000296786.7	2392	11	209	650	209	-646	multi-exon	FALSE	canonical	1	241580	junction_1	81626.36624277722	NA	2	1	TRUE	NA	NA	NA	C	coding	318	957	118	1074	85.0	0	True	NA	NA
PB.11722.15	chr9	-	6413	14	full-splice_match	PTBP3	ENST00000374257.5	7240	14	48	779	-5	-779	multi-exon	FALSE	canonical	1	259769	junction_12	122928.3672971026	NA	9	1	TRUE	NA	NA	NA	C	coding	524	1575	202	1776	35.0	-1	True	TATAAA	-16
PB.3653.1	chr14	+	3955	2	full-splice_match	C14orf132	ENST00000555004.2	7583	2	-33	3661	-33	3419	multi-exon	FALSE	canonical	1	105587	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	597	3359	3955	70.0	-73	False	NA	NA
PB.2237.1	chr11	+	3102	11	full-splice_match	CEP57	ENST00000325542.9	3178	11	74	2	2	0	multi-exon	FALSE	canonical	1	241140	junction_10	97688.35203748704	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	165	1667	20.0	-4	True	ATTAAA	-19
PB.3385.10	chr14	+	2195	6	novel_not_in_catalog	KIAA0391	novel	603	2	NA	NA	1	-24363	any annotated donor/acceptor	FALSE	canonical	1	975	junction_5	100644.04208019469	NA	2	NA	TRUE	NA	NA	NA	C	coding	447	1344	366	1709	35.0	13	True	AATAAA	-9
PB.3385.11	chr14	+	2664	8	novel_in_catalog	KIAA0391	novel	603	2	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	1	8429	junction_1	137904.04616638782	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	418	2169	35.0	9	True	AATAAA	-14
PB.10027.8	chr6	-	3173	18	novel_not_in_catalog	MCM3	novel	3083	17	NA	NA	-7	-5	any annotated donor/acceptor	FALSE	canonical	1	3507	junction_5	520342.5044861181	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	85	2604	30.0	-17	True	AATAAA	-19
PB.3653.2	chr14	+	4060	2	full-splice_match	C14orf132	ENST00000555004.2	7583	2	24	3499	-14	-3497	multi-exon	FALSE	canonical	1	105587	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	83	252	154	405	95.0	-16	True	NA	NA
PB.7306.22	chr20	-	3222	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-5	-2485	any annotated donor/acceptor	FALSE	canonical	1	16545	junction_2	450054.38779132266	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	140	1240	75.0	-42	True	AATATA	-24
PB.7306.23	chr20	-	1857	11	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-7	-2485	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	431883.8031163128	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	155	1477	75.0	-13	True	AATATA	-24
PB.7306.20	chr20	-	2235	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	42	2168	-13	-2168	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	117	1538	35.0	-19	True	CATAAA	-39
PB.7306.21	chr20	-	1909	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	51	2485	-4	-2485	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	108	1529	75.0	-10	True	AATATA	-24
PB.10027.1	chr6	-	3222	18	novel_in_catalog	MCM3	novel	3083	17	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	1	73235	junction_1	499117.99751532637	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	68	2569	25.0	0	True	AATAAA	-27
PB.7306.24	chr20	-	1659	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	33	2753	9	-2753	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	126	1547	25.0	-28	True	ACTAAA	-26
PB.7306.25	chr20	-	2907	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	5	-2759	any annotated donor/acceptor	FALSE	canonical	1	16545	junction_2	450054.38779132266	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	99	1199	25.0	-1	True	ACTAAA	-20
PB.9134.26	chr5	-	2631	14	incomplete-splice_match	NSUN2	ENST00000264670.10	3303	19	227	6636	-22	-1074	3prime_fragment	FALSE	canonical	1	362924	junction_12	155705.23462494597	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	86	1690	80.0	-21	True	NA	NA
PB.9134.25	chr5	-	2932	13	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-36	-1074	intron_retention	FALSE	canonical	1	362924	junction_11	161618.04893815663	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	100	1611	80.0	-35	True	NA	NA
PB.9134.24	chr5	-	2807	18	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-25	25	combination_of_known_junctions	FALSE	canonical	1	8238	junction_4	223010.67135661317	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	89	1846	30.0	-24	True	AATAAA	-25
PB.9134.23	chr5	-	2943	19	full-splice_match	NSUN2	ENST00000264670.10	3303	19	224	136	-25	25	multi-exon	FALSE	canonical	1	362924	junction_17	141049.2812405374	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	89	2392	30.0	-24	True	AATAAA	-25
PB.9134.22	chr5	-	2824	18	full-splice_match	NSUN2	ENST00000506139.5	2619	18	-1	-204	-1	35	multi-exon	FALSE	canonical	1	55346	junction_16	198647.7291681281	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	65	2263	30.0	0	True	AATAAA	-35
PB.11724.2	chr9	+	4759	12	novel_not_in_catalog	HSDL2	novel	3350	11	NA	NA	-71	3097	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	152118.20437116473	NA	3	NA	TRUE	NA	NA	NA	C	coding	418	1257	156	1412	10.0	-123	False	NA	NA
PB.2348.4	chr11	+	3009	9	novel_in_catalog	SLC37A2	novel	2910	18	NA	NA	188	203	combination_of_known_junctions	FALSE	canonical	1	8785	junction_1	35035.506065276124	NA	2	NA	TRUE	NA	NA	NA	C	coding	134	405	224	628	15.0	-2	True	NA	NA
PB.4900.1	chr17	+	1538	8	full-splice_match	TMEM98	ENST00000579849.5	4434	8	228	2668	-39	34	multi-exon	FALSE	canonical	1	18761	junction_5	141443.0156442184	NA	0	NA	TRUE	NA	NA	NA	A	coding	226	681	204	884	25.0	-39	True	AGTAAA	-21
PB.2348.2	chr11	+	3968	18	full-splice_match	SLC37A2	ENST00000403796.6	2910	18	222	-1280	-13	205	multi-exon	FALSE	canonical	1	49965	junction_4	20407.888856804748	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	80	1585	10.0	-7743	False	NA	NA
PB.2348.3	chr11	+	2998	8	novel_in_catalog	SLC37A2	novel	2910	18	NA	NA	113	203	combination_of_known_junctions	FALSE	canonical	1	8785	junction_1	43348.157780689966	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	237	617	15.0	-77	False	NA	NA
PB.2348.1	chr11	+	2736	18	full-splice_match	SLC37A2	ENST00000403796.6	2910	18	172	2	-63	0	multi-exon	TRUE	canonical	1	49965	junction_4	20407.888856804748	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	130	1635	10.0	-7793	False	AATAGA	-16
PB.9764.9	chr6	-	5970	22	novel_not_in_catalog	NUP153	novel	5811	21	NA	NA	-72	0	any annotated donor/acceptor	FALSE	canonical	1	5669	junction_20	135909.36290109452	NA	2	NA	TRUE	NA	NA	NA	C	coding	1463	4392	520	4911	15.0	-21	True	AATAAA	-13
PB.9764.1	chr6	-	6012	22	full-splice_match	NUP153	ENST00000262077.2	5487	22	-543	18	-96	-18	multi-exon	FALSE	canonical	1	223217	junction_6	99842.31646266219	NA	35	1	TRUE	NA	NA	NA	C	coding	1475	4428	544	4971	60.0	-45	True	GATAAA	-8
PB.9764.2	chr6	-	5977	21	novel_in_catalog	NUP153	novel	5811	21	NA	NA	-97	0	no_combination_of_known_junctions	FALSE	canonical	1	52799	junction_14	132645.42235104647	NA	1	NA	TRUE	NA	NA	NA	C	coding	1457	4374	545	4918	15.0	-46	True	AATAAA	-13
PB.6815.1	chr2	-	2641	3	full-splice_match	TTC21B	ENST00000486672.5	745	3	-1902	6	-1902	-3	multi-exon	FALSE	canonical	1	14085	junction_2	2168.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AATATA	-20
PB.8671.5	chr4	-	3060	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-21	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	88	2661	40.0	-1	True	TATAAA	-3
PB.8671.4	chr4	-	3080	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-31	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	98	2671	40.0	-11	True	TATAAA	-3
PB.8671.7	chr4	-	2806	17	full-splice_match	NOP14	ENST00000398071.4	2535	17	-97	-174	-45	3	multi-exon	FALSE	canonical	1	602	junction_1	140851.80432572562	NA	1	NA	TRUE	NA	NA	NA	C	coding	806	2421	112	2532	40.0	66	False	TATAAA	-3
PB.8671.6	chr4	-	2930	19	full-splice_match	NOP14	ENST00000314262.10	2889	19	-38	-3	-21	3	multi-exon	FALSE	canonical	1	8756	junction_1	151447.16699506217	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	88	2661	40.0	-1	True	TATAAA	-3
PB.8671.1	chr4	-	3550	18	full-splice_match	NOP14	ENST00000416614.6	3538	18	-18	6	-18	3	multi-exon	FALSE	canonical	1	289308	junction_17	110200.89458842867	NA	2	NA	TRUE	NA	NA	NA	C	coding	857	2574	85	2658	40.0	2	True	TATAAA	-3
PB.8671.3	chr4	-	3193	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-19	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	1	NA	TRUE	NA	NA	NA	C	coding	857	2574	86	2659	40.0	1	True	TATAAA	-3
PB.8671.2	chr4	-	3317	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-7	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	2	1	TRUE	NA	NA	NA	C	coding	857	2574	74	2647	40.0	13	True	TATAAA	-3
PB.9067.1	chr4	-	2320	13	full-splice_match	AADAT	ENST00000337664.8	2261	13	-66	7	-66	0	multi-exon	TRUE	canonical	1	64183	junction_7	18056.140315039338	NA	23	NA	TRUE	NA	NA	NA	A	coding	425	1278	344	1621	50.0	1661	False	AATAAA	-12
PB.8671.9	chr4	-	3160	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-42	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	2	1	TRUE	NA	NA	NA	C	coding	857	2574	109	2682	50.0	-22	True	NA	NA
PB.8671.8	chr4	-	3110	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-21	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	1	1	TRUE	NA	NA	NA	C	coding	857	2574	88	2661	40.0	-1	True	TATAAA	-2
PB.4630.1	chr16	+	1953	4	full-splice_match	TUBB3	ENST00000554444.5	1978	4	31	-6	31	0	multi-exon	FALSE	canonical	1	14269	junction_1	470072.30348745285	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	524	1660	15.0	-7099	False	AATAAA	-23
PB.4630.2	chr16	+	1700	4	full-splice_match	TUBB3	ENST00000315491.11	1769	4	63	6	0	0	multi-exon	FALSE	canonical	1	354955	junction_1	311963.11245722626	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	61	1413	15.0	-3	True	AATAAA	-17
PB.6732.6	chr2	-	2861	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-6	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	125063.01465536284	NA	4	1	TRUE	NA	NA	NA	C	coding	142	429	26	454	25.0	4	True	AATAAA	-16
PB.11986.9	chrX	+	1446	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	9	4674	9	-4674	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	85	1143	50.0	2	True	AGTAAA	-21
PB.11986.8	chrX	+	2613	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	7	3509	7	-3509	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	87	1145	50.0	0	True	ATTAAA	-14
PB.8643.8	chr4	+	4746	4	full-splice_match	ZNF141	ENST00000240499.7	2970	4	-22	-1754	-1	1754	multi-exon	FALSE	canonical	1	39455	junction_2	16506.45654147357	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	172	1596	50.0	-1	True	NA	NA
PB.8643.9	chr4	+	2900	4	full-splice_match	ZNF141	ENST00000503699.1	720	4	-18	-2162	1	2162	multi-exon	FALSE	canonical	1	3572	junction_3	29845.838529945104	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	170	613	70.0	1	True	AATAAA	-18
PB.11986.5	chrX	+	3261	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	-16	2884	-16	-2884	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	110	1168	30.0	-23	True	AATAAA	-29
PB.11986.4	chrX	+	1245	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	-19	4903	-19	-4903	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	113	1171	50.0	-26	True	ATTAAA	-23
PB.11986.7	chrX	+	3472	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	2	2655	2	-2655	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	92	1150	30.0	-5	True	AATAAA	-20
PB.11986.6	chrX	+	2006	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	-3	4126	-3	-4126	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	97	1155	100.0	-10	True	NA	NA
PB.11986.1	chrX	+	2330	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	-69	3868	-69	-3868	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	163	1221	20.0	-180	False	CATAAA	-15
PB.8643.3	chr4	+	2842	4	full-splice_match	ZNF141	ENST00000240499.7	2970	4	-40	168	-19	-168	multi-exon	FALSE	canonical	1	39455	junction_2	16506.45654147357	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	190	1614	65.0	-19	True	NA	NA
PB.11986.3	chrX	+	3119	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	-28	3038	-28	-3038	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	122	1180	65.0	-35	True	AATAAA	-8
PB.11986.2	chrX	+	1739	9	full-splice_match	SYAP1	ENST00000380155.3	6129	9	-44	4434	-44	-4434	multi-exon	FALSE	canonical	1	601800	junction_3	104593.32128415274	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	138	1196	45.0	-155	False	AATAAA	-17
PB.10487.1	chr7	+	4679	23	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	-31	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_18	204006.9341421576	NA	2	NA	TRUE	NA	NA	NA	B	coding	850	2553	359	2911	30.0	-87	False	AATAAA	-20
PB.852.52	chr1	-	3955	33	full-splice_match	COPA	ENST00000241704.7	4789	33	146	688	-2	-180	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	0	NA	TRUE	NA	NA	NA	C	coding	1224	3675	85	3759	30.0	-8	True	NA	NA
PB.6732.3	chr2	-	3172	6	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131683.14891070916	NA	5	NA	TRUE	NA	NA	NA	C	coding	142	429	24	452	25.0	6	True	AATAAA	-16
PB.10067.18	chr6	+	3371	20	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-60	4975	combination_of_known_junctions	FALSE	canonical	1	24242	junction_6	167507.47544036485	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2277	1094	3370	65.0	-13	True	AATAAA	-15
PB.7958.3	chr3	+	4412	21	full-splice_match	CAPN7	ENST00000253693.6	4353	21	1	-60	1	60	multi-exon	FALSE	canonical	1	134924	junction_1	43396.75152347235	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	253	2694	20.0	-2	True	NA	NA
PB.4617.1	chr16	+	3546	18	novel_in_catalog	SPG7	novel	3330	17	NA	NA	-1	3	intron_retention	FALSE	canonical	1	17302	junction_10	172086.59879984343	NA	14	2	TRUE	NA	NA	NA	C	coding	463	1392	53	1444	35.0	-9722	False	AATAAA	-13
PB.11678.1	chr9	+	1209	6	full-splice_match	NANS	ENST00000210444.5	1170	6	-39	0	-39	0	multi-exon	FALSE	canonical	1	607481	junction_1	203430.9123318283	NA	0	NA	TRUE	NA	NA	NA	A	coding	359	1080	110	1189	15.0	-39	True	AATAAA	-14
PB.4617.3	chr16	+	3081	17	full-splice_match	SPG7	ENST00000645818.1	3359	17	274	4	1	2	multi-exon	FALSE	canonical	1	292269	junction_3	121274.56807190593	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	23	2410	15.0	-8	True	AATAAA	-19
PB.4617.2	chr16	+	3473	19	novel_not_in_catalog	SPG7	novel	3330	17	NA	NA	1	2	intron_retention	TRUE	non_canonical	0	0	junction_10	190502.1134743913	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	23	1414	15.0	-8	True	AATAAA	-19
PB.4617.5	chr16	+	2302	10	full-splice_match	SPG7	ENST00000341316.6	2288	10	-15	1	1	-1	multi-exon	FALSE	canonical	1	53525	junction_9	109305.15736739557	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	23	1492	10.0	-8	True	AATAAA	-15
PB.4617.4	chr16	+	2595	17	full-splice_match	SPG7	ENST00000645818.1	3359	17	274	490	1	6	multi-exon	FALSE	canonical	1	292269	junction_3	121274.56807190593	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	23	2410	10.0	-8	True	NA	NA
PB.4617.7	chr16	+	3282	18	full-splice_match	SPG7	ENST00000645063.1	3266	18	-6	-10	0	3	multi-exon	FALSE	canonical	1	11864	junction_16	173255.84528116204	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	22	2451	35.0	-7	True	AATAAA	-13
PB.4617.6	chr16	+	4368	19	novel_not_in_catalog	SPG7	novel	3330	17	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	188191.24605570792	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	22	1413	20.0	-7	True	AATAAA	-20
PB.4617.9	chr16	+	1917	12	incomplete-splice_match	SPG7	ENST00000644225.1	4581	17	1	9396	1	-13	3prime_fragment	FALSE	canonical	1	292269	junction_3	55204.99617421453	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	17	1726	75.0	-2	True	AATAAA	-13
PB.4617.8	chr16	+	3020	17	novel_not_in_catalog	SPG7	novel	3330	17	NA	NA	2	3	intron_retention	FALSE	canonical	0	0	junction_6	160736.50283188632	NA	1	1	TRUE	NA	NA	NA	C	coding	423	1272	1084	2355	35.0	-5	True	AATAAA	-13
PB.8473.44	chr3	+	5865	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	162	0	no_combination_of_known_junctions	FALSE	canonical	1	20416	junction_1	339384.38695033436	NA	21	NA	TRUE	NA	NA	NA	C	coding	382	1149	1304	2452	25.0	-775	False	AATAAA	-37
PB.10353.22	chr7	+	4175	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	1	55607	junction_7	204216.67629732765	NA	1	NA	TRUE	NA	NA	NA	B	coding	829	2490	106	2595	25.0	-1	True	AATAAA	-31
PB.3450.11	chr14	-	3174	25	incomplete-splice_match	WDHD1	ENST00000360586.7	5996	26	-29	5492	-1	-3171	3prime_fragment	FALSE	canonical	1	127999	junction_18	37905.67774863461	NA	0	NA	TRUE	NA	NA	NA	C	coding	1026	3078	96	3173	60.0	304	False	NA	NA
PB.3450.10	chr14	-	3325	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	-20	2691	8	-370	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1079	3237	87	3323	45.0	1	True	NA	NA
PB.3450.13	chr14	-	2935	23	incomplete-splice_match	WDHD1	ENST00000420358.2	3722	25	4	14514	4	-14402	3prime_fragment	FALSE	canonical	1	11378	junction_22	53446.907211562815	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2568	367	2934	55.0	-3	True	NA	NA
PB.3450.12	chr14	-	3047	24	incomplete-splice_match	WDHD1	ENST00000360586.7	5996	26	-23	16703	5	-14382	3prime_fragment	FALSE	canonical	1	127999	junction_17	38656.34710165791	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2958	90	3047	55.0	-2	True	AAGAAA	-11
PB.12027.6	chrX	+	1562	1	incomplete-splice_match	MID1IP1	ENST00000614558.2	3781	3	3450	85	1149	10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	183	552	66	617	30.0	-1127	False	AATAAA	-19
PB.6732.21	chr2	-	2801	4	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	14	33	any annotated donor/acceptor	FALSE	canonical	1	6779	junction_2	122251.37646759738	NA	2	NA	TRUE	NA	NA	NA	C	coding	94	285	44	328	35.0	-14	True	AATAAA	-16
PB.4361.9	chr16	+	1576	11	full-splice_match	CORO1A	ENST00000219150.9	1803	11	189	38	2	4	multi-exon	FALSE	canonical	1	1098116	junction_10	820430.7603056397	NA	6	2	TRUE	NA	NA	NA	C	coding	461	1386	117	1502	75.0	5	True	NA	NA
PB.4361.8	chr16	+	3385	6	novel_in_catalog	CORO1A	novel	937	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2630078	junction_3	488294.2117844118	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	1964	2998	25.0	4	True	AATAAA	-18
PB.12027.2	chrX	+	4759	2	full-splice_match	MID1IP1	ENST00000336949.6	2536	2	-2318	95	-17	9	multi-exon	FALSE	canonical	1	842793	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	3264	3815	30.0	-4594	False	AATAAA	-18
PB.6732.25	chr2	-	1729	3	novel_in_catalog	POLR2D	novel	5042	4	NA	NA	16	32	no_combination_of_known_junctions	FALSE	canonical	1	43903	junction_2	33092.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-12	True	AATAAA	-15
PB.12027.1	chrX	+	3718	3	full-splice_match	MID1IP1	ENST00000614558.2	3781	3	-23	86	-23	9	multi-exon	FALSE	canonical	1	12239	junction_1	415277.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	2223	2774	30.0	-4600	False	AATAAA	-18
PB.4361.3	chr16	+	2812	10	full-splice_match	CORO1A	ENST00000568763.1	2809	10	-3	0	-3	0	multi-exon	FALSE	canonical	1	1098116	junction_9	856375.3821302697	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	1634	2701	25.0	-4	True	AATAAA	-19
PB.4361.2	chr16	+	2925	9	novel_in_catalog	CORO1A	novel	937	6	NA	NA	-5	-1	intron_retention	TRUE	canonical	1	1098116	junction_8	854530.0531348265	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	1636	2295	25.0	-6	True	AATAAA	-18
PB.4361.1	chr16	+	2919	9	novel_in_catalog	CORO1A	novel	937	6	NA	NA	-17	0	intron_retention	FALSE	canonical	1	1098116	junction_8	906941.9044343383	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	1891	2808	25.0	-4851	False	AATAAA	-19
PB.8738.2	chr4	+	4126	15	full-splice_match	FAM114A1	ENST00000358869.4	4050	15	-72	-4	-7	4	multi-exon	FALSE	canonical	1	41554	junction_1	113096.77548844022	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	249	1940	30.0	-692	False	ATTAAA	-19
PB.4361.7	chr16	+	3002	8	novel_in_catalog	CORO1A	novel	937	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1098116	junction_7	883607.6631223445	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	1870	2412	25.0	3	True	AATAAA	-19
PB.4361.6	chr16	+	3293	7	novel_in_catalog	CORO1A	novel	937	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	2000784	junction_2	666978.5126330699	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	1870	2379	25.0	3	True	AATAAA	-19
PB.4361.5	chr16	+	1594	11	novel_not_in_catalog	CORO1A	novel	937	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	17700	junction_10	1071181.2175981477	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	119	1483	25.0	3	True	AATAAA	-19
PB.4361.4	chr16	+	1903	10	incomplete-splice_match	CORO1A	ENST00000219150.9	1803	11	181	2	-2	-1	intron_retention	FALSE	canonical	1	2000784	junction_3	622381.2347705135	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	125	1516	25.0	-3	True	AATAAA	-18
PB.7517.21	chr21	+	4921	38	novel_not_in_catalog	TTC3	novel	769	9	NA	NA	-2	-305	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104519.51185522416	NA	0	NA	TRUE	NA	NA	NA	C	coding	1608	4824	96	4919	45.0	1	True	NA	NA
PB.5313.2	chr17	-	3689	26	novel_in_catalog	CEP131	novel	3505	25	NA	NA	-8	-1	combination_of_known_junctions	TRUE	canonical	1	13590	junction_5	48033.819871819476	NA	3	NA	TRUE	NA	NA	NA	C	coding	1085	3258	257	3514	10.0	1	True	AGTAAA	-21
PB.5313.1	chr17	-	3685	26	full-splice_match	CEP131	ENST00000450824.6	3543	26	-88	-54	-19	-1	multi-exon	FALSE	canonical	1	56258	junction_25	42561.67113046197	NA	0	NA	TRUE	NA	NA	NA	C	coding	1080	3243	268	3510	10.0	7524	False	AGTAAA	-21
PB.9061.6	chr4	-	2491	2	novel_not_in_catalog	CBR4	novel	1198	6	NA	NA	-32	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	4028	False	AATAAA	-16
PB.3888.6	chr15	-	3700	1	genic	RFX7	novel	NA	NA	NA	NA	-553	-136568	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	18	57	331	387	85.0	1283	False	AAAAAG	-30
PB.3888.4	chr15	-	3034	1	novel_in_catalog	RFX7	novel	4165	9	NA	NA	50862	-3257	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	1477	False	ATTAAA	-14
PB.3888.5	chr15	-	5434	1	novel_in_catalog	RFX7	novel	4165	9	NA	NA	48461	-3258	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	B	coding	852	2559	72	2630	35.0	-924	False	ATTAAA	-13
PB.9153.5	chr5	-	1847	12	full-splice_match	ANKH	ENST00000284268.7	8214	12	100	6267	41	21	multi-exon	FALSE	canonical	1	403506	junction_11	85305.66218163911	NA	4	NA	TRUE	NA	NA	NA	C	coding	492	1479	239	1717	25.0	8	True	AATGAA	-15
PB.3888.3	chr15	-	3548	1	novel_in_catalog	RFX7	novel	4165	9	NA	NA	50348	-3257	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	230	693	51	743	35.0	963	False	ATTAAA	-14
PB.3888.1	chr15	-	7570	10	novel_not_in_catalog	RFX7	novel	4165	9	NA	NA	-552	-3251	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	40912.23864370545	NA	2	NA	TRUE	NA	NA	NA	B	coding	1460	4383	377	4759	20.0	1284	False	ATTAAA	-20
PB.2498.21	chr12	-	2691	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-20	105	combination_of_known_junctions	FALSE	canonical	1	34343	junction_15	141407.75922410417	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	245	2194	75.0	-21	True	NA	NA
PB.4413.23	chr16	+	5086	16	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	4	-1846	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	133906.2863010297	NA	1	1	TRUE	NA	NA	NA	C	coding	852	2559	90	2648	20.0	0	True	NA	NA
PB.4413.20	chr16	+	3478	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	4	4717	4	733	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	90	2648	65.0	0	True	NA	NA
PB.4413.21	chr16	+	3479	16	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	4	1597	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	133906.2863010297	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	90	2648	100.0	0	True	NA	NA
PB.4413.26	chr16	+	4822	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	10	3367	10	2083	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	84	2642	0.0	6	True	NA	NA
PB.4413.27	chr16	+	4911	15	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	10	-1847	any annotated donor/acceptor	FALSE	canonical	1	133	junction_14	169596.85135664145	NA	2	1	TRUE	NA	NA	NA	C	coding	808	2427	47	2473	20.0	43	True	NA	NA
PB.2498.27	chr12	-	2175	15	full-splice_match	RECQL	ENST00000444129.6	3702	15	289	1238	247	-347	multi-exon	FALSE	canonical	1	268057	junction_14	102629.86629713772	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	181	2130	25.0	290	False	ATTAAA	-17
PB.4413.25	chr16	+	2712	14	full-splice_match	LONP2	ENST00000535754.5	2580	14	-31	-101	6	101	multi-exon	FALSE	canonical	1	32780	junction_2	135234.4715791864	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	88	2514	15.0	2	True	AGTAAA	-14
PB.2498.29	chr12	-	2417	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	19	-347	combination_of_known_junctions	FALSE	canonical	1	32243	junction_15	141781.72780527428	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	423	2372	25.0	-42	True	ATTAAA	-17
PB.2498.28	chr12	-	2316	16	full-splice_match	RECQL	ENST00000421138.6	2572	16	-84	340	20	-340	multi-exon	FALSE	canonical	1	85686	junction_15	132580.6780516008	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	315	2264	30.0	-41	True	ATTAAA	-24
PB.11832.1	chr9	-	4508	11	novel_in_catalog	SPOUT1	novel	4286	12	NA	NA	6	-3	intron_retention	FALSE	canonical	1	242922	junction_2	59536.5724190602	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	807	1397	30.0	-22	True	NA	NA
PB.8860.3	chr4	-	2143	2	incomplete-splice_match	HELQ	ENST00000510985.1	3315	17	-24	44881	8	1466	3prime_fragment	FALSE	canonical	1	76935	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	155	1216	70.0	-25	True	NA	NA
PB.11724.1	chr9	+	3201	11	full-splice_match	HSDL2	ENST00000398805.7	3350	11	144	5	1	0	multi-exon	FALSE	canonical	1	344539	junction_4	84388.26144440942	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	84	1340	30.0	-51	False	NA	NA
PB.11832.2	chr9	-	4277	12	full-splice_match	SPOUT1	ENST00000361256.9	4286	12	6	3	6	-3	multi-exon	FALSE	canonical	1	242922	junction_2	58495.59564970018	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	36	1166	30.0	-22	True	NA	NA
PB.9549.1	chr5	+	4044	20	novel_not_in_catalog	ABLIM3	novel	4164	21	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	59766.60108980814	NA	2	1	TRUE	NA	NA	NA	B	coding	527	1584	248	1831	15.0	-10	True	CATAAA	-20
PB.8860.2	chr4	-	3454	18	novel_in_catalog	HELQ	novel	3429	17	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	1	22387	junction_17	17671.90169709235	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	180	3374	50.0	-50	True	NA	NA
PB.10152.11	chr6	-	2513	7	full-splice_match	ZBTB24	ENST00000230122.3	5519	7	-8	3014	-8	-3014	multi-exon	FALSE	canonical	1	34694	junction_6	30397.46888402973	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	177	2270	35.0	-29	True	NA	NA
PB.10706.6	chr7	+	3868	5	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	13	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	102529.10448867678	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	208	1788	45.0	13	True	NA	NA
PB.4607.2	chr16	+	2707	10	full-splice_match	CDT1	ENST00000301019.8	3240	10	532	1	532	-1	multi-exon	FALSE	canonical	1	208488	junction_1	110376.68549724632	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	88	1728	30.0	-7792	False	NA	NA
PB.4607.3	chr16	+	2230	10	full-splice_match	CDT1	ENST00000301019.8	3240	10	584	426	584	-426	multi-exon	FALSE	canonical	1	208488	junction_1	110376.68549724632	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	36	1676	65.0	0	True	NA	NA
PB.4607.1	chr16	+	1964	10	full-splice_match	CDT1	ENST00000301019.8	3240	10	527	749	527	-749	multi-exon	TRUE	canonical	1	208488	junction_1	110376.68549724632	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	93	1733	5.0	-7797	False	ATTAAA	-16
PB.11440.12	chr9	+	2918	5	novel_not_in_catalog	CD274	novel	3343	6	NA	NA	17	-52	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	38181.42435137799	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	70	624	15.0	0	True	AATAAA	-32
PB.8860.4	chr4	-	2292	2	full-splice_match	HELQ	ENST00000440639.2	744	2	-60	-1488	-27	1451	multi-exon	FALSE	canonical	1	31733	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	637	1380	75.0	-61	True	NA	NA
PB.1101.4	chr1	+	3382	12	full-splice_match	HHAT	ENST00000261458.7	3594	12	-37	249	10	-249	multi-exon	FALSE	canonical	1	13581	junction_1	12562.823324567511	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	233	1714	70.0	-17	True	NA	NA
PB.10706.8	chr7	+	4045	7	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	-27	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	89517.02507468745	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	174	1967	50.0	0	True	NA	NA
PB.6333.6	chr2	-	3112	21	incomplete-splice_match	WDR35	ENST00000281405.8	6918	27	-30	24783	-21	-11	3prime_fragment	FALSE	canonical	1	54182	junction_9	19778.363281373917	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	138	2720	60.0	-49	True	AATAAA	-13
PB.6333.7	chr2	-	2547	12	incomplete-splice_match	WDR35	ENST00000281405.8	6918	27	-13	42547	-4	-4635	3prime_fragment	FALSE	canonical	1	62326	junction_2	10182.59763574945	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	121	1533	100.0	-32	True	NA	NA
PB.2862.1	chr12	+	1329	6	full-splice_match	C12orf75	ENST00000443585.5	1366	6	36	1	-2	0	multi-exon	FALSE	canonical	1	649734	junction_1	600755.1881748171	NA	0	NA	TRUE	NA	NA	NA	A	coding	63	192	221	412	30.0	-33	True	ATTAAA	-19
PB.6333.1	chr2	-	6937	27	full-splice_match	WDR35	ENST00000281405.8	6918	27	-32	13	-23	-13	multi-exon	TRUE	canonical	1	54182	junction_15	19794.55441491945	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	140	3652	55.0	-51	True	AATAAA	-6
PB.1101.2	chr1	+	3593	11	novel_in_catalog	HHAT	novel	3164	10	NA	NA	-27	-7	no_combination_of_known_junctions	FALSE	canonical	1	2802	junction_2	16750.231896902205	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	337	1683	20.0	-424	False	AATAAA	-15
PB.10706.9	chr7	+	3712	4	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	110963.22045014134	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	160	1635	45.0	14	True	NA	NA
PB.8964.8	chr4	-	2218	4	full-splice_match	BBS7	ENST00000502444.1	725	4	24	-1517	-13	-1174	multi-exon	FALSE	canonical	1	198532	junction_3	36112.23527959588	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	151	606	5.0	7	True	NA	NA
PB.8860.6	chr4	-	1209	2	incomplete-splice_match	HELQ	ENST00000510985.1	3315	17	-20	45811	12	536	3prime_fragment	FALSE	canonical	1	76935	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1059	151	1209	45.0	-21	True	AATAAA	-25
PB.10246.1	chr6	-	1762	2	full-splice_match	CITED2	ENST00000367651.3	2354	2	134	458	119	-10	multi-exon	FALSE	canonical	1	1777838	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	83	895	40.0	161	False	AATAAA	-6
PB.9549.2	chr5	+	3996	19	novel_not_in_catalog	ABLIM3	novel	4164	21	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	62164.94783643089	NA	2	1	TRUE	NA	NA	NA	B	coding	511	1536	248	1783	15.0	-10	True	CATAAA	-20
PB.10246.2	chr6	-	2120	1	novel_in_catalog	CITED2	novel	2354	2	NA	NA	-22	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	270	813	441	1253	40.0	263	False	AATAAA	-6
PB.635.18	chr1	-	4383	18	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-20	intron_retention	FALSE	canonical	1	1441617	junction_1	1281004.821851601	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	447	2456	90.0	-1	True	NA	NA
PB.10477.2	chr7	-	1591	10	full-splice_match	NT5C3A	ENST00000643244.1	1542	10	-47	-2	-37	2	multi-exon	FALSE	canonical	1	71352	junction_4	96636.8223621147	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	96	989	30.0	-48	False	AATAAA	-26
PB.11949.2	chrX	-	1909	11	novel_in_catalog	ARSE	novel	2506	12	NA	NA	64	5	combination_of_known_junctions	FALSE	canonical	1	7440	junction_10	18512.686996759818	NA	0	NA	TRUE	NA	NA	NA	B	coding	598	1797	92	1888	25.0	-2	True	AATAAA	-21
PB.635.17	chr1	-	4420	18	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-20	intron_retention	FALSE	canonical	1	1441617	junction_1	1209358.5390178596	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	447	2573	90.0	-1	True	NA	NA
PB.444.4	chr1	+	3693	26	incomplete-splice_match	PATJ	ENST00000635214.1	4863	36	-26	199603	-26	-3429	3prime_fragment	FALSE	canonical	1	47957	junction_1	24436.123260451932	NA	0	NA	TRUE	NA	NA	NA	B	coding	1184	3552	141	3692	70.0	-29	True	NA	NA
PB.11949.1	chrX	-	2078	11	novel_in_catalog	ARSE	novel	2506	12	NA	NA	43	-31	combination_of_known_junctions	FALSE	canonical	1	7440	junction_10	18512.686996759818	NA	0	NA	TRUE	NA	NA	NA	B	coding	598	1797	113	1909	90.0	-23	False	NA	NA
PB.444.2	chr1	+	3850	27	incomplete-splice_match	PATJ	ENST00000635214.1	4863	36	-66	186421	5	9753	3prime_fragment	FALSE	canonical	1	47957	junction_1	24650.663073045893	NA	0	NA	TRUE	NA	NA	NA	B	coding	1223	3669	181	3849	15.0	-4688	False	AATGAA	-23
PB.444.3	chr1	+	4318	29	novel_in_catalog	PATJ	novel	8730	44	NA	NA	25	-7	combination_of_known_junctions	FALSE	canonical	1	4824	junction_28	30730.370673730864	NA	1	NA	TRUE	NA	NA	NA	B	coding	1300	3903	161	4063	30.0	-49	True	AATAAA	-24
PB.635.10	chr1	-	3753	20	full-splice_match	CSDE1	ENST00000369530.5	3774	20	1	20	1	-20	multi-exon	FALSE	canonical	1	164728	junction_18	1691347.8370368776	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	475	2916	90.0	619	False	NA	NA
PB.444.1	chr1	+	5248	37	incomplete-splice_match	PATJ	ENST00000642238.1	8730	44	1	46558	1	-1	3prime_fragment	FALSE	canonical	1	47957	junction_1	22729.62818092402	NA	1	NA	TRUE	NA	NA	NA	B	coding	1638	4917	185	5101	25.0	-4692	False	AATAAA	-24
PB.10472.2	chr7	+	2732	18	full-splice_match	MINDY4	ENST00000265299.6	2733	18	0	1	0	0	multi-exon	FALSE	canonical	1	32585	junction_9	11230.012340578713	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	78	2351	25.0	0	True	TATAAA	-15
PB.10472.1	chr7	+	4563	14	incomplete-splice_match	MINDY4	ENST00000265299.6	2733	18	0	17404	0	-17403	3prime_fragment	FALSE	canonical	1	32585	junction_9	12369.35027735991	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	78	2120	55.0	0	True	NA	NA
PB.533.1	chr1	-	5730	6	full-splice_match	ZNF644	ENST00000337393.9	5763	6	23	10	23	-8	multi-exon	FALSE	canonical	1	100675	junction_5	72882.7609778883	NA	2	NA	TRUE	NA	NA	NA	C	coding	1302	3909	336	4244	65.0	-1	True	AATAAA	-10
PB.3844.10	chr15	+	1706	4	full-splice_match	BLOC1S6	ENST00000567461.5	1052	4	138	-792	-2	0	multi-exon	FALSE	canonical	1	39761	junction_1	247919.8173258622	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-5	True	NA	NA
PB.3844.11	chr15	+	3118	5	full-splice_match	BLOC1S6	ENST00000220531.7	4037	5	253	666	0	-665	multi-exon	FALSE	canonical	1	132740	junction_3	189348.06336133333	NA	1	1	TRUE	NA	NA	NA	C	coding	172	519	69	587	75.0	-3	True	NA	NA
PB.3844.12	chr15	+	3684	5	full-splice_match	BLOC1S6	ENST00000565323.5	688	5	125	-3121	-4	-4	multi-exon	FALSE	canonical	1	15700	junction_1	222460.14882600322	NA	0	NA	TRUE	NA	NA	NA	C	coding	75	228	265	492	30.0	-4	True	AATAAA	-13
PB.3844.13	chr15	+	1832	5	full-splice_match	BLOC1S6	ENST00000565323.5	688	5	44	-1188	44	0	multi-exon	FALSE	canonical	1	15700	junction_1	222460.14882600322	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	40	573	85.0	-150	False	NA	NA
PB.3844.14	chr15	+	3592	4	full-splice_match	BLOC1S6	ENST00000563160.5	581	4	0	-3011	0	-4	multi-exon	FALSE	canonical	1	15700	junction_1	276075.2654488748	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-13
PB.3844.15	chr15	+	3733	5	full-splice_match	BLOC1S6	ENST00000565409.5	616	5	-8	-3109	5	0	multi-exon	FALSE	canonical	1	17983	junction_1	221894.50759369868	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-34	True	AATAAA	-17
PB.3844.16	chr15	+	1796	5	full-splice_match	BLOC1S6	ENST00000565409.5	616	5	-8	-1172	5	0	multi-exon	FALSE	canonical	1	17983	junction_1	221894.50759369868	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-34	True	NA	NA
PB.3844.17	chr15	+	3568	4	novel_in_catalog	BLOC1S6	novel	4037	5	NA	NA	19	3	no_combination_of_known_junctions	FALSE	canonical	1	3389	junction_1	259010.0214307461	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-7	True	AATAAA	-21
PB.3431.10	chr14	+	3725	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	85	185	3	-185	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	41	883	25.0	-10	True	ATTAAA	-12
PB.3431.11	chr14	+	1502	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	89	2404	7	-512	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	37	879	30.0	-6	True	AATACA	-43
PB.553.3	chr1	+	3290	1	genic	AC105942.1	novel	NA	NA	NA	NA	-201	-32616	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	44	135	172	306	30.0	0	True	NA	NA
PB.6697.12	chr2	+	4308	15	full-splice_match	POLR1B	ENST00000263331.9	4558	15	550	-300	0	300	multi-exon	FALSE	canonical	1	132619	junction_3	37370.569910747705	NA	4	NA	TRUE	NA	NA	NA	C	coding	1135	3408	31	3438	20.0	0	True	NA	NA
PB.553.1	chr1	+	4584	2	novel_not_in_catalog	AC105942.1	novel	518	4	NA	NA	-1164	-31406	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	44	135	256	390	25.0	-994	False	NA	NA
PB.1656.3	chr10	+	2565	8	full-splice_match	VTI1A	ENST00000393077.2	4131	8	-42	1608	-18	-1608	multi-exon	FALSE	canonical	1	120381	junction_7	47743.49538472252	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	159	812	55.0	1	True	ATTAAA	-9
PB.1656.2	chr10	+	3403	8	full-splice_match	VTI1A	ENST00000393077.2	4131	8	-42	770	-18	-770	multi-exon	FALSE	canonical	1	120381	junction_7	47743.49538472252	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	159	812	55.0	1	True	AATAAA	-26
PB.1656.1	chr10	+	4172	8	full-splice_match	VTI1A	ENST00000393077.2	4131	8	-43	2	-19	-2	multi-exon	FALSE	canonical	1	120381	junction_7	47743.49538472252	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	160	813	20.0	0	True	ATTAAA	-16
PB.5638.10	chr19	+	3297	21	novel_not_in_catalog	SAFB	novel	2708	19	NA	NA	6	2	any annotated donor/acceptor	FALSE	canonical	1	599	junction_19	348673.22586149344	NA	2	NA	TRUE	NA	NA	NA	C	coding	953	2862	102	2963	25.0	-26	True	AATAAA	-21
PB.5905.1	chr19	+	2574	3	full-splice_match	NUDT19	ENST00000397061.3	2967	3	385	8	385	-8	multi-exon	FALSE	canonical	1	65952	junction_1	35244.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	74	225	519	743	45.0	-44	True	AATAAA	-16
PB.5905.2	chr19	+	2980	3	full-splice_match	NUDT19	ENST00000397061.3	2967	3	-143	130	-143	-130	multi-exon	FALSE	canonical	1	65952	junction_1	35244.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	375	1128	144	1271	25.0	-3	True	ATTAAA	-26
PB.1656.4	chr10	+	2853	2	novel_not_in_catalog	VTI1A	novel	2423	3	NA	NA	-11	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	8	True	AATAAA	-15
PB.4697.1	chr17	+	2082	4	novel_not_in_catalog	AC004771.3	novel	551	2	NA	NA	0	3773	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	21235.563477860014	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-38	True	NA	NA
PB.2061.3	chr11	+	3188	15	full-splice_match	PCNX3	ENST00000439247.2	3104	15	50	-134	50	0	multi-exon	FALSE	canonical	1	214908	junction_7	64210.31549128065	NA	1	NA	TRUE	NA	NA	NA	C	coding	903	2712	16	2727	10.0	-9459	False	NA	NA
PB.4697.2	chr17	+	2268	3	novel_not_in_catalog	AC004771.3	novel	551	2	NA	NA	4	3773	intron_retention	FALSE	non_canonical	0	0	junction_2	25977.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-34	True	NA	NA
PB.9397.4	chr5	-	2567	10	full-splice_match	TRIM36	ENST00000513154.5	4218	10	55	1596	3	144	multi-exon	FALSE	canonical	1	39735	junction_9	12108.098111451822	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	273	2423	25.0	1	True	AATACA	-9
PB.9397.3	chr5	-	3032	10	full-splice_match	TRIM36	ENST00000513154.5	4218	10	25	1161	25	579	multi-exon	FALSE	canonical	1	39735	junction_9	12108.098111451822	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	303	2453	40.0	-5	True	ATTAAA	-14
PB.9397.2	chr5	-	3305	10	full-splice_match	TRIM36	ENST00000513154.5	4218	10	49	864	-3	-864	multi-exon	FALSE	canonical	1	39735	junction_9	12108.098111451822	NA	2	NA	TRUE	NA	NA	NA	C	coding	716	2151	279	2429	10.0	-5	True	ATTAAA	-18
PB.9397.1	chr5	-	4165	10	full-splice_match	TRIM36	ENST00000513154.5	4218	10	35	18	-17	-18	multi-exon	FALSE	canonical	1	39735	junction_9	12108.098111451822	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	293	2443	75.0	5	False	AATAAA	-28
PB.8894.1	chr4	-	4043	7	full-splice_match	LAMTOR3	ENST00000499666.6	4226	7	88	95	-26	-95	multi-exon	FALSE	canonical	1	187053	junction_5	94835.65781817278	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	106	480	75.0	24	True	NA	NA
PB.7895.1	chr22	+	2272	1	full-splice_match	KLHDC7B	ENST00000395676.4	2990	1	717	1	717	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	349	1050	153	1202	15.0	-20	False	AATACA	-18
PB.553.4	chr1	+	1825	1	genic	AC105942.1	novel	NA	NA	NA	NA	-170	-34050	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	106	321	2	322	20.0	0	True	AGTAAA	-20
PB.10372.1	chr7	+	2404	22	full-splice_match	IQCE	ENST00000402050.6	6844	22	-17	4457	9	-1	multi-exon	TRUE	canonical	1	43306	junction_1	34027.160180510415	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	202	2289	10.0	0	True	NA	NA
PB.8894.2	chr4	-	1408	7	full-splice_match	LAMTOR3	ENST00000499666.6	4226	7	55	2763	-7	108	multi-exon	FALSE	canonical	1	187053	junction_5	94835.65781817278	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	139	513	20.0	-9	True	AATAAA	-18
PB.10372.3	chr7	+	6340	22	full-splice_match	IQCE	ENST00000402050.6	6844	22	4	500	4	-499	multi-exon	FALSE	canonical	1	43306	junction_1	34027.160180510415	NA	12	NA	TRUE	NA	NA	NA	C	coding	695	2088	181	2268	35.0	-14	True	AATAAA	-13
PB.10372.2	chr7	+	2043	19	novel_not_in_catalog	IQCE	novel	6775	20	NA	NA	10	-7	intron_retention	FALSE	canonical	1	3258	junction_18	43612.883899424625	NA	2	1	TRUE	NA	NA	NA	C	coding	559	1680	201	1880	30.0	1	True	AATAAA	-17
PB.8894.3	chr4	-	1287	7	full-splice_match	LAMTOR3	ENST00000499666.6	4226	7	61	2878	-1	-7	multi-exon	FALSE	canonical	1	187053	junction_5	94835.65781817278	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	133	507	45.0	-3	True	AATAAA	-12
PB.7976.1	chr3	+	1429	6	full-splice_match	UBE2E1	ENST00000306627.7	1511	6	74	8	-7	-6	multi-exon	FALSE	canonical	1	121716	junction_1	585444.6753705767	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	146	727	35.0	-17	True	AATAAA	-19
PB.7976.2	chr3	+	2742	5	incomplete-splice_match	UBE2E1	ENST00000306627.7	1511	6	10	8	10	-6	intron_retention	FALSE	canonical	1	121716	junction_1	583039.0708839761	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	321	812	35.0	-12	True	AATAAA	-19
PB.7976.3	chr3	+	4028	4	full-splice_match	UBE2E1	ENST00000495141.5	582	4	73	-3519	55	-6	multi-exon	FALSE	canonical	1	121716	junction_1	584579.7578984981	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	84	488	35.0	-7	True	AATAAA	-19
PB.10053.1	chr6	+	3100	15	novel_not_in_catalog	COL19A1	novel	6233	51	NA	NA	-15	66898	any annotated donor/acceptor	FALSE	canonical	1	2009	junction_14	9664.051179711418	NA	9	NA	TRUE	NA	NA	NA	A	coding	406	1221	118	1338	75.0	0	True	NA	NA
PB.7976.5	chr3	+	1196	5	full-splice_match	UBE2E1	ENST00000424381.5	1224	5	11	17	11	-17	multi-exon	FALSE	canonical	1	53174	junction_1	669611.1600193802	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	23	505	60.0	0	True	AATAAA	-8
PB.2509.9	chr12	-	4420	10	novel_in_catalog	BCAT1	novel	9674	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	7267	junction_9	143270.2099554941	NA	4	NA	TRUE	NA	NA	NA	C	coding	362	1089	145	1233	95.0	-24	True	NA	NA
PB.2509.8	chr12	-	4429	11	full-splice_match	BCAT1	ENST00000539282.5	1811	11	36	-2654	36	-6	multi-exon	FALSE	canonical	1	22501	junction_10	137738.02898328405	NA	26	NA	TRUE	NA	NA	NA	C	coding	398	1197	52	1248	85.0	27	True	NA	NA
PB.3322.7	chr14	-	3922	13	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-20	0	intron_retention	FALSE	canonical	1	19457	junction_11	520866.078211322	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	2772	3341	20.0	-21	True	AATAAA	-17
PB.2075.2	chr11	+	2591	20	novel_in_catalog	SART1	novel	3293	20	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	1	3614	junction_1	270925.13042047573	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	599	2527	10.0	-9	True	AATAAA	-18
PB.3322.1	chr14	-	4444	19	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	194763	junction_15	433506.09895225876	NA	0	NA	TRUE	NA	NA	NA	C	coding	1271	3816	47	3862	15.0	9984	False	AATAAA	-18
PB.3322.3	chr14	-	5924	11	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-7	1	intron_retention	FALSE	canonical	1	112282	junction_10	429590.64410074154	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	4773	5342	15.0	-8	True	AATAAA	-18
PB.3322.2	chr14	-	6499	18	novel_not_in_catalog	ACIN1	novel	2751	12	NA	NA	28	1	intron_retention	FALSE	canonical	1	31856	junction_10	438353.63295366307	NA	1	NA	TRUE	NA	NA	NA	C	coding	746	2241	14	2254	15.0	10	True	AATAAA	-18
PB.533.2	chr1	-	5769	6	full-splice_match	ZNF644	ENST00000370440.5	5702	6	-81	14	-81	-8	multi-exon	FALSE	canonical	1	13028	junction_5	102303.38307524342	NA	0	NA	TRUE	NA	NA	NA	C	coding	1302	3909	375	4283	65.0	735	False	AATAAA	-10
PB.2509.3	chr12	-	2327	1	incomplete-splice_match	BCAT1	ENST00000261192.11	9674	11	135772	1339	16641	-1339	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3652	False	AATAAA	-17
PB.2509.2	chr12	-	7945	11	full-splice_match	BCAT1	ENST00000261192.11	9674	11	387	1342	-11	-1342	multi-exon	FALSE	canonical	1	251866	junction_9	85028.1542363469	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	141	1301	20.0	-20	True	AATAAA	-14
PB.2509.5	chr12	-	4468	10	full-splice_match	BCAT1	ENST00000539780.5	1360	10	-117	-2991	-74	3	multi-exon	FALSE	canonical	1	23679	junction_7	148699.6725379343	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	229	1278	90.0	1	True	NA	NA
PB.3322.8	chr14	-	3809	13	novel_not_in_catalog	ACIN1	novel	2751	12	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	10444	junction_10	572770.0510553224	NA	2	1	TRUE	NA	NA	NA	C	coding	189	570	2659	3228	20.0	-4	True	AATAAA	-17
PB.2509.7	chr12	-	4706	11	full-splice_match	BCAT1	ENST00000538118.5	4694	11	-47	35	45	-17	multi-exon	FALSE	canonical	1	33325	junction_10	134995.57886108715	NA	3	NA	TRUE	NA	NA	NA	C	coding	385	1158	379	1536	70.0	7482	False	NA	NA
PB.2509.6	chr12	-	4504	11	full-splice_match	BCAT1	ENST00000261192.11	9674	11	371	4799	-2	0	multi-exon	FALSE	canonical	1	251866	junction_9	85028.1542363469	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	157	1317	95.0	-36	True	NA	NA
PB.8704.4	chr4	-	2957	12	full-splice_match	FBXL5	ENST00000511441.5	2951	12	-8	2	-8	-2	multi-exon	FALSE	canonical	1	7351	junction_9	243901.79257582853	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	545	2242	20.0	0	True	AATAAA	-26
PB.8704.5	chr4	-	2826	11	full-splice_match	FBXL5	ENST00000412094.6	2837	11	9	2	9	-2	multi-exon	FALSE	canonical	1	28519	junction_10	198237.76853778394	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	87	2111	20.0	-24	True	AATAAA	-26
PB.8704.6	chr4	-	2768	10	novel_in_catalog	FBXL5	novel	3385	11	NA	NA	-1	-2	no_combination_of_known_junctions	FALSE	canonical	1	4720	junction_4	223910.725821754	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	127	1023	20.0	4528	False	AATAAA	-26
PB.8704.7	chr4	-	2665	10	novel_in_catalog	FBXL5	novel	3385	11	NA	NA	-20	-2	no_combination_of_known_junctions	FALSE	canonical	1	4720	junction_4	273336.4881963368	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	75	920	20.0	-12	True	AATAAA	-26
PB.7500.2	chr21	-	3373	23	novel_not_in_catalog	GART	novel	3341	22	NA	NA	2	5113	any annotated donor/acceptor	FALSE	canonical	1	25365	junction_1	210052.8095597491	NA	1	NA	TRUE	NA	NA	NA	C	coding	1037	3114	90	3203	85.0	-1	True	NA	NA
PB.8704.1	chr4	-	3338	11	full-splice_match	FBXL5	ENST00000341285.7	3385	11	55	-8	-16	8	multi-exon	FALSE	canonical	1	367659	junction_10	115780.76646680137	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	71	2146	30.0	-8	True	NA	NA
PB.8704.2	chr4	-	3302	11	full-splice_match	FBXL5	ENST00000412094.6	2837	11	10	-475	10	8	multi-exon	FALSE	canonical	1	28519	junction_10	198237.76853778394	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	86	2110	30.0	-23	True	NA	NA
PB.8704.3	chr4	-	2779	11	full-splice_match	FBXL5	ENST00000341285.7	3385	11	137	469	20	-2	multi-exon	FALSE	canonical	1	367659	junction_10	115780.76646680137	NA	3	NA	TRUE	NA	NA	NA	C	coding	674	2025	40	2064	20.0	4666	False	AATAAA	-26
PB.3748.1	chr15	+	1922	1	antisense	novelGene_FMN1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-434	False	NA	NA
PB.5866.1	chr19	+	2697	5	novel_not_in_catalog	ZNF101	novel	575	3	NA	NA	14	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	78203.23778623235	NA	0	NA	TRUE	NA	NA	NA	A	coding	313	942	511	1452	15.0	-4459	False	NA	NA
PB.10289.1	chr6	+	1504	3	novel_in_catalog	AL080276.2	novel	2090	3	NA	NA	-51	-536	combination_of_known_junctions	FALSE	canonical	1	1383	junction_2	6098.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-34	True	CATAAA	-13
PB.8704.8	chr4	-	2645	9	novel_in_catalog	FBXL5	novel	3385	11	NA	NA	9	-2	no_combination_of_known_junctions	FALSE	canonical	1	2659	junction_3	223364.77373220134	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	87	1058	20.0	-24	True	AATAAA	-26
PB.9206.1	chr5	-	2693	1	novel_in_catalog	AC025171.1	novel	2271	3	NA	NA	37	-1346	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	893	False	NA	NA
PB.8116.1	chr3	+	5374	3	full-splice_match	DAG1	ENST00000421560.5	579	3	-13	-4782	-13	-2	multi-exon	FALSE	canonical	1	8339	junction_1	251161.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	893	2682	279	2960	20.0	-225	False	AATAAA	-18
PB.1660.8	chr10	+	3755	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	185	7111	22	-7111	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	28	2208	45.0	-13	False	ATTAAA	-13
PB.1660.9	chr10	+	7242	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-21	3830	-21	-3830	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	5	NA	TRUE	NA	NA	NA	C	coding	726	2181	234	2414	35.0	-21	True	AATAAA	-13
PB.8116.5	chr3	+	5836	6	novel_in_catalog	DAG1	novel	5576	3	NA	NA	2	-7	no_combination_of_known_junctions	FALSE	canonical	1	838	junction_2	200952.8398459698	NA	13	1	TRUE	NA	NA	NA	C	coding	893	2682	746	3427	25.0	-2	True	AATAAA	-13
PB.8116.4	chr3	+	3451	3	full-splice_match	DAG1	ENST00000308775.6	5522	3	132	1939	-13	-1939	multi-exon	FALSE	canonical	1	147234	junction_1	181713.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	293	2974	25.0	-25	True	ATTAAA	-21
PB.1660.4	chr10	+	2910	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-30	8171	-30	-8171	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	243	2423	50.0	-30	True	CATAAA	-15
PB.1660.5	chr10	+	5362	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-28	5717	-28	-5717	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	241	2421	55.0	-28	True	TATAAA	-14
PB.1660.6	chr10	+	6381	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-27	4697	-27	-4697	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	17	NA	TRUE	NA	NA	NA	C	coding	726	2181	240	2420	30.0	-27	True	ATTAAA	-15
PB.1660.7	chr10	+	3575	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-27	7503	-27	-7503	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	3	NA	TRUE	NA	NA	NA	C	coding	726	2181	240	2420	20.0	-27	True	AAAAAG	-13
PB.5643.1	chr19	-	3309	17	novel_not_in_catalog	RANBP3	novel	3186	17	NA	NA	-2	-3	any annotated donor/acceptor	TRUE	canonical	0	0	junction_16	261947.1848049717	NA	3	1	TRUE	NA	NA	NA	C	coding	286	861	981	1841	20.0	-18	True	ATTAAA	-11
PB.1660.1	chr10	+	4024	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-35	7062	-35	-7062	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	248	2428	50.0	-35	True	CATAAA	-23
PB.1660.2	chr10	+	2589	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	-35	8497	-35	-8497	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	248	2428	40.0	-35	True	AATAAA	-17
PB.1660.3	chr10	+	5319	11	full-splice_match	NHLRC2	ENST00000369301.3	11051	11	200	5532	37	-5532	multi-exon	FALSE	canonical	1	106983	junction_3	12618.060007782495	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	13	2193	25.0	2	True	ATTAAA	-21
PB.9387.1	chr5	-	2067	5	full-splice_match	NREP	ENST00000379671.7	2581	5	28	486	28	-2	multi-exon	FALSE	canonical	1	73415	junction_4	117090.97673283795	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-18	True	AATAAA	-25
PB.9387.3	chr5	-	2099	5	full-splice_match	NREP	ENST00000508161.5	475	5	98	-1722	-11	-2	multi-exon	FALSE	canonical	1	5699	junction_4	137804.12882149068	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-38	False	AATAAA	-18
PB.9387.4	chr5	-	6323	3	incomplete-splice_match	NREP	ENST00000505864.5	701	4	438	-5678	-1	-3	5prime_fragment	FALSE	canonical	1	122942	junction_1	60122.0	NA	25	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-17
PB.8075.5	chr3	-	8409	21	novel_not_in_catalog	SETD2	novel	7555	19	NA	NA	-162	-24	intron_retention	FALSE	non_canonical	0	0	junction_19	141383.15954344597	NA	2	2	TRUE	NA	NA	NA	B	coding	2520	7563	214	7776	75.0	-17	True	NA	NA
PB.6477.6	chr2	-	3715	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	66	630	-2	199	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	3	NA	TRUE	NA	NA	NA	C	coding	783	2352	22	2373	60.0	-10	True	NA	NA
PB.8075.9	chr3	-	4382	3	novel_not_in_catalog	SETD2	novel	7555	19	NA	NA	-146	16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	16740.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	1397	4191	190	4380	70.0	-1	True	AAGAAA	-9
PB.8075.8	chr3	-	4228	2	novel_not_in_catalog	SETD2	novel	7555	19	NA	NA	-10	27	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	B	coding	1349	4047	181	4227	65.0	6	True	AAGAAA	-20
PB.6732.7	chr2	-	4346	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	canonical	1	27	junction_1	125053.63941225382	NA	6	1	TRUE	NA	NA	NA	C	coding	142	429	30	458	25.0	0	True	AATAAA	-15
PB.5884.4	chr19	-	3575	4	full-splice_match	ZNF43	ENST00000354959.8	2881	4	21	-715	0	670	multi-exon	FALSE	canonical	1	27655	junction_3	23589.13225760258	NA	1	NA	TRUE	NA	NA	NA	C	coding	809	2430	150	2579	5.0	-6	True	ATTAAA	-17
PB.5884.5	chr19	-	3326	4	full-splice_match	ZNF43	ENST00000354959.8	2881	4	-12	-433	-12	388	multi-exon	FALSE	canonical	1	27655	junction_3	23589.13225760258	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	183	2612	70.0	8125	False	ACTAAA	-22
PB.5884.6	chr19	-	2859	4	full-splice_match	ZNF43	ENST00000354959.8	2881	4	20	2	-1	-2	multi-exon	FALSE	canonical	1	27655	junction_3	23589.13225760258	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	151	2580	40.0	-7	True	AATAAA	-15
PB.9003.10	chr4	+	2267	9	full-splice_match	USP38	ENST00000510377.5	4135	9	26	1842	-2	-1842	multi-exon	FALSE	canonical	1	122988	junction_3	36223.987042212444	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1758	509	2266	55.0	-6	True	NA	NA
PB.5884.1	chr19	-	4048	5	novel_not_in_catalog	ZNF43	novel	5249	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	29104.781397349474	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	170	2599	35.0	8138	False	AATAAA	-26
PB.5884.2	chr19	-	3983	5	novel_not_in_catalog	ZNF43	novel	5249	4	NA	NA	8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	29104.781397349474	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	163	2592	45.0	8145	False	AATAAA	-23
PB.5884.3	chr19	-	4013	4	full-splice_match	ZNF43	ENST00000354959.8	2881	4	0	-1132	0	1087	multi-exon	FALSE	canonical	1	27655	junction_3	23589.13225760258	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	171	2600	95.0	8137	False	NA	NA
PB.4734.1	chr17	+	3990	5	incomplete-splice_match	NLGN2	ENST00000302926.6	4642	7	6231	1	5773	-1	5prime_fragment	FALSE	canonical	1	218175	junction_2	44211.61024267268	NA	1	NA	TRUE	NA	NA	NA	A	coding	641	1926	5	1930	0.0	-5910	False	TATAAA	-12
PB.10027.9	chr6	-	2948	16	full-splice_match	MCM3	ENST00000419835.7	2523	16	142	-567	12	-5	multi-exon	FALSE	canonical	1	13091	junction_15	470975.769882127	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	91	2379	30.0	2	True	AATAAA	-19
PB.11760.9	chr9	+	5752	32	novel_in_catalog	CNTRL	novel	7660	44	NA	NA	8	0	intron_retention	FALSE	canonical	1	40485	junction_1	53383.26359251297	NA	0	NA	TRUE	NA	NA	NA	C	coding	1726	5181	150	5330	15.0	39	True	AATAAA	-12
PB.11760.8	chr9	+	3841	22	novel_in_catalog	CNTRL	novel	7660	44	NA	NA	-31	-3	combination_of_known_junctions	FALSE	canonical	1	11168	junction_21	45119.83814837047	NA	8	NA	TRUE	NA	NA	NA	C	coding	1148	3447	189	3635	20.0	0	True	ATTAAA	-12
PB.10010.1	chr6	+	2740	4	full-splice_match	C6orf223	ENST00000439969.2	2757	4	47	-30	32	-12	multi-exon	FALSE	canonical	1	24733	junction_1	22004.786696433926	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	60	728	35.0	1	True	AATGAA	-8
PB.11760.3	chr9	+	7617	44	novel_not_in_catalog	CNTRL	novel	1917	11	NA	NA	-59	-18	intron_retention	FALSE	canonical	1	1169	junction_34	60873.98093438963	NA	2	NA	TRUE	NA	NA	NA	C	coding	1725	5178	509	5686	70.0	-2	True	NA	NA
PB.11760.2	chr9	+	5378	32	incomplete-splice_match	CNTRL	ENST00000373855.5	7660	44	-93	17370	56	-7	3prime_fragment	FALSE	canonical	1	30541	junction_1	42912.33698755651	NA	0	NA	TRUE	NA	NA	NA	C	coding	1646	4938	441	5378	60.0	1	True	TATAAA	-5
PB.11760.1	chr9	+	3217	19	incomplete-splice_match	CNTRL	ENST00000373855.5	7660	44	-94	35346	55	-8392	3prime_fragment	FALSE	canonical	1	30541	junction_1	39253.46386697046	NA	1	NA	TRUE	NA	NA	NA	C	coding	954	2862	355	3216	45.0	0	True	NA	NA
PB.11760.7	chr9	+	4394	27	novel_in_catalog	CNTRL	novel	7660	44	NA	NA	-31	6608	combination_of_known_junctions	FALSE	canonical	1	40485	junction_1	47000.65780063411	NA	0	NA	TRUE	NA	NA	NA	C	coding	1402	4206	189	4394	60.0	0	True	NA	NA
PB.6446.5	chr2	-	2919	21	full-splice_match	SRBD1	ENST00000263736.4	3681	21	14	748	14	-652	multi-exon	FALSE	canonical	1	73521	junction_20	31411.021652598312	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2868	50	2917	75.0	-1	True	NA	NA
PB.11760.5	chr9	+	3602	21	novel_in_catalog	CNTRL	novel	7660	44	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	1	40485	junction_1	36740.23621399297	NA	0	NA	TRUE	NA	NA	NA	C	coding	1125	3375	227	3601	60.0	-38	False	TATAAA	-12
PB.10510.6	chr7	-	1783	7	full-splice_match	COA1	ENST00000310564.10	1085	7	-34	-664	0	206	multi-exon	FALSE	canonical	1	31977	junction_5	402087.0294531673	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	357	794	95.0	-41	True	NA	NA
PB.888.2	chr1	+	3266	18	novel_not_in_catalog	DDR2	novel	2998	18	NA	NA	-177	26	any annotated donor/acceptor	TRUE	canonical	1	1469	junction_12	63279.9582210961	NA	2	NA	TRUE	NA	NA	NA	C	coding	873	2622	444	3065	80.0	-1368	False	ATTAAA	-6
PB.10027.4	chr6	-	2917	18	novel_not_in_catalog	MCM3	novel	3083	17	NA	NA	-25	0	any annotated donor/acceptor	FALSE	canonical	1	46296	junction_1	437874.6422412347	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	103	2529	25.0	-35	True	AATAAA	-24
PB.319.4	chr1	-	2504	8	full-splice_match	PPT1	ENST00000641236.1	2481	8	-2	-21	0	2	multi-exon	FALSE	canonical	1	749935	junction_7	278506.32577727776	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	573	1160	10.0	-1	True	AATAAA	-9
PB.888.6	chr1	+	3309	19	novel_not_in_catalog	DDR2	novel	2998	18	NA	NA	-48	26	any annotated donor/acceptor	FALSE	canonical	1	1632	junction_4	65271.14568219763	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	496	3108	80.0	-147	False	ATTAAA	-6
PB.10510.5	chr7	-	2866	6	novel_not_in_catalog	COA1	novel	1737	7	NA	NA	782	-6	any annotated donor/acceptor	FALSE	canonical	1	12839	junction_5	458477.5984492154	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	54	482	50.0	792	False	NA	NA
PB.319.1	chr1	-	2287	9	full-splice_match	PPT1	ENST00000642050.1	4010	9	464	1259	-3	-1	multi-exon	FALSE	canonical	1	749935	junction_8	261385.09756284405	NA	13	NA	TRUE	NA	NA	NA	C	coding	306	921	26	946	5.0	-12	False	AATAAA	-6
PB.888.5	chr1	+	3903	18	full-splice_match	DDR2	ENST00000367921.7	3096	18	-53	-754	-48	754	multi-exon	FALSE	canonical	1	71871	junction_1	37348.640679256794	NA	2	NA	TRUE	NA	NA	NA	C	coding	855	2568	407	2974	20.0	-147	False	AGTAAA	-21
PB.6651.5	chr2	+	1675	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39680	-125300	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	176230.01838829526	NA	0	NA	TRUE	NA	NA	NA	B	coding	161	486	113	598	30.0	-21	False	AATAAA	-14
PB.5226.4	chr17	+	2165	4	novel_in_catalog	GPRC5C	novel	550	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	22032	junction_1	148923.92453717958	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	141	1766	15.0	-370	False	AATAAA	-18
PB.10510.4	chr7	-	3027	8	novel_in_catalog	COA1	novel	1737	7	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	35486	junction_1	414367.90162140026	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	206	643	50.0	-9	True	NA	NA
PB.5226.2	chr17	+	1797	4	full-splice_match	GPRC5C	ENST00000392627.5	2988	4	1194	-3	-9	3	multi-exon	FALSE	canonical	1	143701	junction_1	98161.29743890352	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	68	1393	5.0	17	True	AATAAA	-23
PB.5226.3	chr17	+	2939	1	novel_in_catalog	GPRC5C	novel	550	2	NA	NA	0	-4883	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	237	714	141	854	65.0	-370	False	NA	NA
PB.5226.1	chr17	+	2981	4	full-splice_match	GPRC5C	ENST00000392627.5	2988	4	1	6	1	-4	multi-exon	FALSE	canonical	1	143701	junction_1	98161.29743890352	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	1126	2586	20.0	-1572	False	AATAAA	-14
PB.11036.1	chr8	+	1790	2	full-splice_match	AC090197.1	ENST00000517420.1	1798	2	49	-41	12	41	multi-exon	FALSE	canonical	1	2107	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-26
PB.10027.7	chr6	-	3050	17	novel_not_in_catalog	MCM3	novel	3083	17	NA	NA	-25	-2	any annotated donor/acceptor	FALSE	canonical	1	4708	junction_13	453287.53367981274	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	103	2478	25.0	-35	True	AATAAA	-22
PB.8120.4	chr3	+	4260	39	novel_not_in_catalog	RNF123	novel	4311	39	NA	NA	4	1	any annotated donor/acceptor	FALSE	canonical	1	274	junction_9	76509.49440626267	NA	0	NA	TRUE	NA	NA	NA	C	coding	1313	3942	96	4037	5.0	11	True	ATTAAA	-15
PB.8120.5	chr3	+	4448	39	novel_in_catalog	RNF123	novel	4311	39	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	1	9363	junction_1	72886.05112117669	NA	0	NA	TRUE	NA	NA	NA	C	coding	1307	3924	302	4225	5.0	21	True	ATTAAA	-15
PB.8120.6	chr3	+	3060	26	incomplete-splice_match	RNF123	ENST00000327697.10	4311	39	10971	-1	-30	1	5prime_fragment	FALSE	canonical	1	169560	junction_10	65765.39543797786	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	36	2837	5.0	NA	False	ATTAAA	-15
PB.6651.6	chr2	+	1766	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39701	-125108	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	176230.01838829526	NA	3	1	TRUE	NA	NA	NA	B	coding	161	486	92	577	20.0	0	True	AATAAA	-25
PB.8994.1	chr4	-	2416	1	full-splice_match	AC097376.2	ENST00000610159.1	5334	1	-29	2947	-29	-2947	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	235	False	NA	NA
PB.8120.1	chr3	+	4599	38	novel_in_catalog	RNF123	novel	4311	39	NA	NA	14	0	intron_retention	TRUE	canonical	1	120235	junction_1	64845.85326343067	NA	6	1	TRUE	NA	NA	NA	C	coding	1084	3255	1123	4377	5.0	-45	False	ATTAAA	-14
PB.8120.2	chr3	+	3662	26	incomplete-splice_match	RNF123	ENST00000327697.10	4311	39	43	13564	-2	-4867	3prime_fragment	FALSE	canonical	1	120235	junction_1	38583.83617825474	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	123	3038	5.0	-16	True	NA	NA
PB.8120.3	chr3	+	4250	39	full-splice_match	RNF123	ENST00000327697.10	4311	39	61	0	-2	0	multi-exon	FALSE	canonical	1	120235	junction_1	64999.82103342078	NA	0	NA	TRUE	NA	NA	NA	C	coding	1307	3924	105	4028	5.0	2	True	ATTAAA	-14
PB.9659.8	chr5	-	1872	1	genic	PHYKPL	novel	NA	NA	NA	NA	-18	-2813	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-8	True	AATAAA	-10
PB.249.5	chr1	+	3993	14	novel_not_in_catalog	KPNA6	novel	7378	14	NA	NA	469	-1	any annotated donor/acceptor	FALSE	canonical	1	1401	junction_1	98421.29337530897	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	114	1715	95.0	440	False	ATTAAA	-20
PB.8061.8	chr3	-	4041	3	full-splice_match	KIAA1143	ENST00000296121.5	5122	3	15	1066	15	-1066	multi-exon	FALSE	canonical	1	334	junction_2	32300.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	154	465	46	510	85.0	14	False	NA	NA
PB.10027.2	chr6	-	3063	17	full-splice_match	MCM3	ENST00000229854.11	3083	17	12	8	12	-3	multi-exon	FALSE	canonical	1	801646	junction_8	344769.3400767887	NA	14	NA	TRUE	NA	NA	NA	C	coding	808	2427	66	2492	25.0	2	True	AATAAA	-21
PB.3649.1	chr14	-	5967	18	novel_not_in_catalog	SYNE3	novel	13488	17	NA	NA	-40846	2606	any annotated donor/acceptor	FALSE	canonical	1	29662	junction_4	15374.77514303744	NA	3	NA	TRUE	NA	NA	NA	B	coding	975	2928	102	3029	35.0	0	True	TATAAA	-15
PB.9659.1	chr5	-	1968	13	full-splice_match	PHYKPL	ENST00000308158.9	2038	13	-17	87	-11	0	multi-exon	FALSE	canonical	1	156240	junction_12	80112.69765080245	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	253	1605	25.0	-1	True	ATTAAA	-20
PB.3649.3	chr14	-	2236	10	novel_not_in_catalog	SYNE3	novel	13488	17	NA	NA	-40838	-457	any annotated donor/acceptor	FALSE	canonical	1	43332	junction_9	12505.337775881502	NA	0	NA	TRUE	NA	NA	NA	B	coding	596	1791	94	1884	25.0	8	False	AATAAA	-20
PB.3649.2	chr14	-	5937	18	novel_not_in_catalog	SYNE3	novel	13488	17	NA	NA	-40831	2606	any annotated donor/acceptor	FALSE	canonical	1	35892	junction_4	14654.79377997398	NA	43	1	TRUE	NA	NA	NA	B	coding	970	2913	87	2999	35.0	15	False	TATAAA	-15
PB.9659.4	chr5	-	1911	13	full-splice_match	PHYKPL	ENST00000308158.9	2038	13	-16	143	-10	-1	multi-exon	FALSE	canonical	1	156240	junction_12	80112.69765080245	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	252	1604	45.0	0	True	AATAAA	-18
PB.9659.5	chr5	-	2726	4	full-splice_match	PHYKPL	ENST00000476170.2	824	4	-244	-1658	-24	-1	multi-exon	FALSE	canonical	1	16245	junction_1	96228.8363237456	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	266	637	15.0	-14	True	NA	NA
PB.9659.6	chr5	-	3269	1	novel_in_catalog	PHYKPL	novel	2038	13	NA	NA	148	-1000	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	98	297	1	297	100.0	-4	True	NA	NA
PB.9659.7	chr5	-	1862	1	novel_in_catalog	PHYKPL	novel	2038	13	NA	NA	139	-2416	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	101	306	1	306	75.0	-13	True	NA	NA
PB.11011.1	chr8	+	3755	28	full-splice_match	XPO7	ENST00000252512.13	4861	28	2	1104	2	-804	multi-exon	FALSE	canonical	1	350874	junction_1	88969.82036928707	NA	1	NA	TRUE	NA	NA	NA	C	coding	1087	3264	99	3362	40.0	6	True	AAAAAG	-3
PB.11011.2	chr8	+	4886	28	novel_in_catalog	XPO7	novel	4861	28	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	18064	junction_5	123963.00906856584	NA	2	NA	TRUE	NA	NA	NA	C	coding	1096	3291	100	3390	25.0	5	True	AATAAA	-19
PB.11737.2	chr9	-	2430	11	full-splice_match	WDR31	ENST00000374193.8	4878	11	-14	2462	2	0	multi-exon	FALSE	canonical	1	12908	junction_8	6638.39584538313	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	262	1365	95.0	-3	True	NA	NA
PB.11011.4	chr8	+	4648	26	novel_in_catalog	XPO7	novel	4861	28	NA	NA	14	-2	no_combination_of_known_junctions	FALSE	canonical	1	4235	junction_19	126266.57847474287	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	87	2255	25.0	18	True	AATAAA	-18
PB.11011.5	chr8	+	1548	7	novel_not_in_catalog	XPO7	novel	4861	28	NA	NA	25	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	168379.9677155477	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	76	702	25.0	29	True	AATAAA	-15
PB.11011.6	chr8	+	4534	28	full-splice_match	XPO7	ENST00000252512.13	4861	28	37	290	37	10	multi-exon	FALSE	canonical	1	350874	junction_1	88969.82036928707	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	64	3327	50.0	-39	False	AATAAA	-38
PB.11011.7	chr8	+	4792	28	full-splice_match	XPO7	ENST00000252512.13	4861	28	68	1	-18	-1	multi-exon	FALSE	canonical	1	350874	junction_1	88969.82036928707	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	33	3296	25.0	-8	True	AATAAA	-19
PB.11011.9	chr8	+	4369	24	novel_in_catalog	XPO7	novel	4861	28	NA	NA	5628	-3	combination_of_known_junctions	FALSE	canonical	1	18064	junction_1	131196.57066289923	NA	3	NA	TRUE	NA	NA	NA	C	coding	871	2616	260	2875	25.0	1689	False	AATAAA	-17
PB.9055.7	chr4	+	2180	6	full-splice_match	MSMO1	ENST00000261507.10	2269	6	87	2	-11	-2	multi-exon	FALSE	canonical	1	591155	junction_1	251512.37333427553	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	87	968	30.0	-10	True	ATTAAA	-16
PB.10049.4	chr6	+	2162	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	510	2416	510	-2416	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	644	1165	50.0	-6	True	NA	NA
PB.10049.5	chr6	+	3042	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	467	1579	467	-1579	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	687	1208	30.0	-1	True	AGTAAA	-13
PB.10049.6	chr6	+	4472	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	537	79	537	-79	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	617	1138	35.0	0	True	ATTAAA	-22
PB.10049.7	chr6	+	4352	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	537	199	537	-199	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	617	1138	25.0	0	True	ATTAAA	-28
PB.2917.1	chr12	-	932	7	full-splice_match	RPL6	ENST00000202773.13	947	7	24	-9	-3	0	multi-exon	FALSE	canonical	1	9256	junction_1	1038006.7157665562	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	32	898	10.0	-34	True	ATTAAA	-13
PB.2917.2	chr12	-	4458	1	genic	RPL6	novel	NA	NA	NA	NA	-7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	993	1310	10.0	-65	True	ATTAAA	-12
PB.2917.3	chr12	-	2297	6	novel_in_catalog	RPL6	novel	899	2	NA	NA	1	-1	intron_retention	FALSE	canonical	1	9256	junction_1	1039435.4406770243	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	1719	2264	10.0	-51	True	ATTAAA	-12
PB.1979.1	chr11	+	1988	2	full-splice_match	FEN1	ENST00000305885.2	2296	2	294	14	-20	-2	multi-exon	FALSE	canonical	1	309851	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	120	1262	55.0	20	True	AATAAA	-6
PB.1979.3	chr11	+	2205	2	full-splice_match	FEN1	ENST00000535723.1	776	2	-55	-1374	-55	-2	multi-exon	FALSE	canonical	1	2884	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	337	1479	55.0	-15	True	AATAAA	-6
PB.1979.2	chr11	+	4345	1	novel_in_catalog	FEN1	novel	2296	2	NA	NA	-65	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	380	1143	2477	3619	55.0	-25	True	AATAAA	-6
PB.10049.8	chr6	+	3570	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	468	1050	468	-1050	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	686	1207	45.0	0	True	AATACA	-19
PB.10049.9	chr6	+	3213	5	incomplete-splice_match	AL135905.2	ENST00000370651.6	5088	6	468	2132	468	-2132	intron_retention	FALSE	canonical	1	664867	junction_2	385861.51261649234	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	686	1093	25.0	0	True	AATAAA	-22
PB.3522.16	chr14	-	3193	22	full-splice_match	ACTN1	ENST00000394419.8	3464	22	-65	336	-42	27	multi-exon	TRUE	canonical	1	34502	junction_3	646322.3905088503	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	249	2993	70.0	-3	True	AAAAAG	-17
PB.11737.1	chr9	-	2603	12	novel_not_in_catalog	WDR31	novel	4862	11	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	249	junction_11	10972.9324700253	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	438	1538	95.0	0	True	NA	NA
PB.8092.34	chr3	-	2066	1	genic	UCN2_PFKFB4	novel	NA	NA	NA	NA	-12	7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	112	339	662	1000	25.0	-5	True	AATAAA	-29
PB.9950.22	chr6	-	2322	16	full-splice_match	SRPK1	ENST00000373825.6	4592	16	247	2023	0	439	multi-exon	FALSE	canonical	1	388970	junction_2	91632.64998086411	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	40	2007	45.0	-1	True	TTTAAA	-19
PB.8092.32	chr3	-	5257	2	full-splice_match	UCN2	ENST00000273610.3	1481	2	-8	-3768	-8	3768	multi-exon	FALSE	canonical	1	6164	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	112	339	92	430	75.0	-1	True	NA	NA
PB.8092.33	chr3	-	1498	2	full-splice_match	UCN2	ENST00000273610.3	1481	2	-11	-6	-11	6	multi-exon	FALSE	canonical	1	6164	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	95	433	20.0	-4	True	AATAAA	-28
PB.8092.31	chr3	-	5826	1	genic	UCN2_PFKFB4	novel	NA	NA	NA	NA	-11	3768	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	112	339	661	999	75.0	-4	True	NA	NA
PB.6846.3	chr2	-	3336	6	novel_not_in_catalog	OLA1	novel	4417	11	NA	NA	44	-43533	any annotated donor/acceptor	FALSE	canonical	1	1015	junction_1	147833.8434275454	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	105	698	5.0	43	False	ATTAAA	-18
PB.7207.11	chr20	-	2984	9	novel_in_catalog	NAPB	novel	3824	10	NA	NA	0	-689	combination_of_known_junctions	FALSE	canonical	1	21867	junction_7	91285.31435687986	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	499	819	30.0	-28	True	AATAAA	-13
PB.7207.10	chr20	-	3148	11	full-splice_match	NAPB	ENST00000377026.4	3837	11	10	679	-6	-679	multi-exon	FALSE	canonical	1	148073	junction_9	74719.9829818637	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	77	973	30.0	-18	True	AATAAA	-23
PB.7690.3	chr22	+	2435	16	full-splice_match	NF2	ENST00000338641.8	6025	16	54	3536	-5	117	multi-exon	FALSE	canonical	1	134456	junction_15	60452.53238904793	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	388	2175	20.0	-29	True	NA	NA
PB.3025.1	chr12	+	2156	15	novel_not_in_catalog	NOC4L	novel	1632	15	NA	NA	-22	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	97009.69597553281	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	64	1044	35.0	-41	True	AATAAA	-15
PB.1515.5	chr10	+	2164	3	full-splice_match	MINPP1	ENST00000371994.8	2183	3	18	1	18	-1	multi-exon	FALSE	canonical	1	2486	junction_2	63524.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	24	962	20.0	0	True	AATAAA	-19
PB.1515.4	chr10	+	2148	5	full-splice_match	MINPP1	ENST00000371996.8	2415	5	266	1	266	-1	multi-exon	FALSE	canonical	1	129535	junction_1	68190.43757512853	NA	3	NA	TRUE	NA	NA	NA	C	coding	346	1041	199	1239	20.0	248	False	AATAAA	-19
PB.1515.3	chr10	+	2518	6	novel_in_catalog	MINPP1	novel	2415	5	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	1	579	junction_5	102505.6977959762	NA	3	1	TRUE	NA	NA	NA	C	coding	356	1071	24	1094	20.0	0	True	AATAAA	-18
PB.1515.2	chr10	+	3270	6	novel_not_in_catalog	MINPP1	novel	2415	5	NA	NA	18	-2	any annotated donor/acceptor	TRUE	canonical	1	1286	junction_1	129908.13290106205	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	1502	2362	20.0	0	True	AATAAA	-18
PB.1515.1	chr10	+	3925	5	full-splice_match	MINPP1	ENST00000371996.8	2415	5	0	-1510	0	1438	multi-exon	FALSE	canonical	1	129535	junction_1	68190.43757512853	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	42	1505	15.0	0	True	AATAAA	-29
PB.7690.4	chr22	+	5970	16	full-splice_match	NF2	ENST00000338641.8	6025	16	51	4	-8	0	multi-exon	FALSE	canonical	1	134456	junction_15	60452.53238904793	NA	3	NA	TRUE	NA	NA	NA	C	coding	595	1788	391	2178	25.0	-32	True	AATAAA	-14
PB.1229.1	chr1	+	1528	6	novel_not_in_catalog	FMN2	novel	6434	18	NA	NA	9974	-37	any annotated donor/acceptor	FALSE	canonical	1	379	junction_1	33048.16381949231	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	183	536	75.0	1	True	NA	NA
PB.10826.2	chr7	+	2404	4	novel_not_in_catalog	AC010655.4	novel	707	5	NA	NA	39	-29590	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	154820.8004335622	NA	0	NA	TRUE	NA	NA	NA	B	coding	63	192	214	405	85.0	1	True	NA	NA
PB.3250.17	chr13	-	2260	2	incomplete-splice_match	ARGLU1	ENST00000360629.3	361	4	-540	883	1	-883	3prime_fragment	FALSE	canonical	1	1629779	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	245	1066	65.0	-27	True	ATTAAA	-7
PB.3250.16	chr13	-	2471	2	incomplete-splice_match	ARGLU1	ENST00000360629.3	361	4	-538	670	3	-670	3prime_fragment	FALSE	canonical	1	1629779	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	243	1064	25.0	-25	True	AGTAAA	-15
PB.3250.15	chr13	-	3015	2	incomplete-splice_match	ARGLU1	ENST00000472226.2	4009	3	-12	13893	-12	-114	3prime_fragment	FALSE	canonical	1	1629779	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	231	1052	55.0	-13	True	TATAAA	-21
PB.3025.2	chr12	+	1615	15	full-splice_match	NOC4L	ENST00000330579.5	1632	15	18	-1	18	1	multi-exon	FALSE	canonical	1	220180	junction_9	58772.54695616216	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	24	1574	30.0	-1	True	AATAAA	-20
PB.3250.13	chr13	-	3935	3	full-splice_match	ARGLU1	ENST00000472226.2	4009	3	-27	101	0	-101	multi-exon	FALSE	canonical	1	1629779	junction_2	184912.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	246	1067	5.0	-28	True	NA	NA
PB.3250.12	chr13	-	1708	4	full-splice_match	ARGLU1	ENST00000400198.7	3390	4	27	1655	0	-1	multi-exon	FALSE	canonical	1	682934	junction_2	554467.2992611917	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	219	1040	30.0	-1	True	AATAAA	-34
PB.3250.11	chr13	-	1778	5	novel_in_catalog	ARGLU1	novel	3390	4	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	66845	junction_3	872770.1215727928	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	231	884	30.0	-13	True	AATAAA	-34
PB.3250.10	chr13	-	3635	4	novel_not_in_catalog	ARGLU1	novel	3390	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	3843	junction_2	866891.0206941945	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	219	1040	30.0	-1	True	AATAAA	-34
PB.544.3	chr1	-	1976	12	novel_not_in_catalog	CCDC18-AS1	novel	770	7	NA	NA	1	-4	any annotated donor/acceptor	FALSE	canonical	1	1989	junction_2	64605.3164283708	NA	13	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-56	True	NA	NA
PB.11657.11	chr9	-	1796	3	full-splice_match	FAM120AOS	ENST00000423591.5	1800	3	-2	6	-2	-6	multi-exon	FALSE	canonical	1	281713	junction_1	4618.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	74	225	461	685	35.0	-11	True	AGTAAA	-19
PB.8798.6	chr4	+	4017	26	novel_in_catalog	POLR2B	novel	608	4	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	3464	junction_1	300082.5227452849	NA	0	NA	TRUE	NA	NA	NA	C	coding	1167	3504	341	3844	15.0	1	True	AATAAA	-19
PB.3685.10	chr14	-	897	2	full-splice_match	BAG5	ENST00000557666.1	878	2	175	-194	158	194	multi-exon	FALSE	canonical	1	125163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	822	76	897	50.0	-1	True	ACTAAA	-31
PB.544.1	chr1	-	2800	10	novel_not_in_catalog	CCDC18-AS1	novel	770	7	NA	NA	1	-4	intron_retention	FALSE	canonical	1	14339	junction_2	61814.76695821772	NA	9	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-56	True	NA	NA
PB.11281.1	chr8	+	1868	3	full-splice_match	UBR5-AS1	ENST00000520820.1	800	3	97	-1165	97	6	multi-exon	FALSE	canonical	1	22342	junction_1	3528.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-36	True	AATAAA	-22
PB.6915.2	chr2	+	2254	9	novel_not_in_catalog	SLC39A10	novel	593	3	NA	NA	-25	7023	intron_retention	FALSE	canonical	1	12111	junction_8	101689.93706967458	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	84	2240	65.0	-25	True	TTTAAA	-38
PB.6915.3	chr2	+	3994	8	novel_in_catalog	SLC39A10	novel	593	3	NA	NA	-11	-5	no_combination_of_known_junctions	FALSE	canonical	1	411	junction_1	113135.54080384992	NA	6	NA	TRUE	NA	NA	NA	C	coding	381	1146	193	1338	25.0	-11	True	AATAAA	-17
PB.6915.1	chr2	+	1620	5	incomplete-splice_match	SLC39A10	ENST00000359634.9	5322	10	108	28870	1	2156	3prime_fragment	FALSE	canonical	1	210340	junction_2	44594.043116766166	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1563	58	1620	60.0	1	True	NA	NA
PB.6915.6	chr2	+	3649	1	novel_in_catalog	SLC39A10	novel	593	3	NA	NA	29	2325	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2474	False	AATAAA	-19
PB.6915.4	chr2	+	2912	9	novel_not_in_catalog	SLC39A10	novel	593	3	NA	NA	-9	7697	intron_retention	FALSE	canonical	1	12111	junction_8	101689.93706967458	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	68	2224	80.0	-9	True	NA	NA
PB.6915.5	chr2	+	5218	10	full-splice_match	SLC39A10	ENST00000359634.9	5322	10	99	5	-8	-5	multi-exon	FALSE	canonical	1	196082	junction_8	52702.28834467657	NA	2	NA	TRUE	NA	NA	NA	C	coding	831	2496	67	2562	25.0	-8	True	AATAAA	-17
PB.2767.7	chr12	-	2344	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	-42	7816	-27	1132	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	67	1212	80.0	-63	False	NA	NA
PB.2767.6	chr12	-	2573	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	0	7545	0	1403	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	25	1170	75.0	-21	True	AATAAA	-5
PB.5521.10	chr18	+	5824	2	novel_not_in_catalog	SOCS6	novel	5848	2	NA	NA	795	-6	any annotated donor/acceptor	FALSE	canonical	1	5434	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	535	1608	299	1906	20.0	639	False	AATAAA	-13
PB.5216.2	chr17	+	2643	1	genic	AC007639.1	novel	NA	NA	NA	NA	277	6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-1135	False	NA	NA
PB.5216.1	chr17	+	4532	1	genic	AC007639.1	novel	NA	NA	NA	NA	-1612	6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-3024	False	NA	NA
PB.544.4	chr1	-	1497	5	full-splice_match	CCDC18-AS1	ENST00000452347.5	969	5	6	-534	4	534	multi-exon	FALSE	canonical	1	115223	junction_4	26059.146363369233	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-53	True	TATAAA	-37
PB.7239.1	chr20	-	2124	9	novel_not_in_catalog	SNTA1	novel	2342	8	NA	NA	151	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	114391.98392697804	NA	0	NA	TRUE	NA	NA	NA	A	coding	396	1191	383	1573	5.0	21	True	AATAAA	-36
PB.8118.5	chr3	+	2329	23	novel_not_in_catalog	APEH	novel	3220	22	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	304778.1972315623	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	52	2322	10.0	-16	True	AATAAA	-12
PB.8118.4	chr3	+	2353	22	novel_not_in_catalog	APEH	novel	3220	22	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	2811	junction_5	307984.6018912968	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	52	2193	10.0	-16	True	AATAAA	-12
PB.8118.7	chr3	+	2023	18	novel_not_in_catalog	APEH	novel	3220	22	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	341907.7276756989	NA	4	1	TRUE	NA	NA	NA	C	coding	603	1812	52	1863	10.0	-16	True	AATAAA	-12
PB.10630.1	chr7	-	1537	7	full-splice_match	POMZP3	ENST00000310842.8	1490	7	-66	19	-46	-11	multi-exon	FALSE	canonical	1	5238	junction_3	89948.35038139016	NA	3	NA	TRUE	NA	NA	NA	A	coding	187	564	752	1315	65.0	NA	False	NA	NA
PB.8118.1	chr3	+	2400	22	full-splice_match	APEH	ENST00000296456.9	3220	22	359	461	1	-1	multi-exon	FALSE	canonical	1	378785	junction_1	218389.69298186214	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	42	2240	10.0	-6	True	AATAAA	-12
PB.8118.3	chr3	+	2485	21	novel_in_catalog	APEH	novel	3220	22	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	597398	junction_1	163678.48251660937	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	52	2325	10.0	-16	True	AATAAA	-12
PB.8118.2	chr3	+	2292	21	novel_not_in_catalog	APEH	novel	3220	22	NA	NA	0	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	317052.53631166555	NA	2	1	TRUE	NA	NA	NA	C	coding	696	2091	36	2126	10.0	0	True	AATAAA	-18
PB.2254.1	chr11	-	2134	9	full-splice_match	CASP1	ENST00000533400.5	2001	9	0	-133	0	68	multi-exon	FALSE	canonical	1	232586	junction_8	86629.39761844344	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	37	1251	70.0	-7	True	NA	NA
PB.2254.2	chr11	-	1365	10	full-splice_match	CASP1	ENST00000436863.7	1477	10	101	11	0	2	multi-exon	FALSE	canonical	1	134372	junction_1	103254.47225934359	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	37	1251	45.0	-7	True	AATAAA	-27
PB.2254.3	chr11	-	4428	7	novel_in_catalog	CASP1	novel	821	5	NA	NA	0	2	intron_retention	FALSE	canonical	1	232586	junction_6	89785.68800513563	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	750	2940	3689	45.0	-1	True	AATAAA	-27
PB.2254.4	chr11	-	1990	9	full-splice_match	CASP1	ENST00000533400.5	2001	9	0	11	0	2	multi-exon	FALSE	canonical	1	232586	junction_8	86629.39761844344	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	37	1251	45.0	-7	True	AATAAA	-27
PB.2767.9	chr12	-	1156	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	-12	8974	3	-5	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1119	37	1155	85.0	-33	True	AAGAAA	-25
PB.2254.6	chr11	-	1902	9	novel_in_catalog	CASP1	novel	821	5	NA	NA	0	2	intron_retention	FALSE	canonical	1	31669	junction_8	130703.14020519935	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	66	1163	45.0	-5	True	AATAAA	-27
PB.2254.7	chr11	-	1295	9	novel_in_catalog	CASP1	novel	821	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	49931	junction_7	140069.54158375895	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	31	1182	45.0	-1	True	AATAAA	-26
PB.8798.4	chr4	+	3965	26	novel_not_in_catalog	POLR2B	novel	608	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	62	junction_25	332406.3743496962	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	1634	3766	15.0	0	True	AATAAA	-16
PB.11694.9	chr9	+	3233	20	full-splice_match	RNF20	ENST00000389120.7	3940	20	14	693	14	-693	multi-exon	FALSE	canonical	1	213414	junction_1	75333.80389430495	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	77	3004	10.0	0	True	AATACA	-39
PB.2767.8	chr12	-	1978	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	-12	8152	3	796	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	37	1182	0.0	-33	True	AAAAAG	-16
PB.8912.1	chr4	-	1782	1	antisense	novelGene_TET2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	103	312	1311	1622	100.0	NA	False	NA	NA
PB.11694.3	chr9	+	2150	15	incomplete-splice_match	RNF20	ENST00000389120.7	3940	20	-2	8612	-2	-6720	3prime_fragment	FALSE	canonical	1	213414	junction_1	82577.9192975659	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2058	93	2150	70.0	-16	True	NA	NA
PB.2575.1	chr12	-	4267	6	full-splice_match	ZNF641	ENST00000547026.5	1823	6	-15	-2429	-15	-119	multi-exon	FALSE	canonical	1	43310	junction_5	22925.225988853414	NA	1	NA	TRUE	NA	NA	NA	A	coding	424	1275	147	1421	40.0	-42	True	AATAAA	-18
PB.11694.1	chr9	+	3902	20	novel_not_in_catalog	RNF20	novel	3940	20	NA	NA	-7	4	any annotated donor/acceptor	FALSE	canonical	1	5368	junction_4	107072.0494971659	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	736	2976	10.0	-21	True	ATTAAA	-22
PB.11134.1	chr8	+	2306	3	incomplete-splice_match	RP1	ENST00000522001.2	1109	4	1	19	1	1	intron_retention	FALSE	canonical	1	479	junction_2	735.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.11694.7	chr9	+	4148	2	incomplete-splice_match	RNF20	ENST00000374819.6	596	5	-23	1395	14	-784	3prime_fragment	FALSE	canonical	1	213414	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.11694.6	chr9	+	3894	21	novel_not_in_catalog	RNF20	novel	3940	20	NA	NA	3	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	106972.78353109262	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	88	1869	10.0	-11	True	ATTAAA	-16
PB.571.1	chr1	+	2191	1	genic	SLC30A7	novel	NA	NA	NA	NA	17737	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1113	False	AATAAA	-20
PB.11694.4	chr9	+	3938	20	full-splice_match	RNF20	ENST00000389120.7	3940	20	1	1	1	-1	multi-exon	FALSE	canonical	1	213414	junction_1	75333.80389430495	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	90	3017	10.0	-13	True	ATTAAA	-17
PB.385.1	chr1	+	3121	2	full-splice_match	LURAP1	ENST00000371980.3	1854	2	1	-1268	1	1268	multi-exon	FALSE	canonical	1	34221	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	93	812	20.0	1	True	NA	NA
PB.385.2	chr1	+	1851	2	full-splice_match	LURAP1	ENST00000371980.3	1854	2	2	1	2	-1	multi-exon	FALSE	canonical	1	34221	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	92	811	15.0	2	True	AATAGA	-19
PB.3860.1	chr15	+	3361	1	full-splice_match	GABPB1-AS1	ENST00000619314.1	1076	1	-15	-2270	-15	1868	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-21	True	NA	NA
PB.8798.3	chr4	+	3903	24	novel_in_catalog	POLR2B	novel	608	4	NA	NA	-4	1	intron_retention	FALSE	canonical	1	530053	junction_3	195026.5540400518	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	127	2916	15.0	-4	True	AATAAA	-17
PB.11063.9	chr8	+	2315	11	novel_in_catalog	HMBOX1	novel	3184	10	NA	NA	-81	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	48077.67562902766	NA	0	NA	TRUE	NA	NA	NA	B	coding	420	1263	309	1571	95.0	3	True	NA	NA
PB.6846.2	chr2	-	1715	10	full-splice_match	OLA1	ENST00000344357.9	1656	10	-62	3	37	-1	multi-exon	FALSE	canonical	1	77409	junction_9	105955.91825546142	NA	4	NA	TRUE	NA	NA	NA	C	coding	425	1278	23	1300	10.0	-63	False	AATAAA	-13
PB.12272.1	chrX	-	2321	8	full-splice_match	GPC3	ENST00000370818.7	2568	8	264	-17	15	17	multi-exon	FALSE	canonical	1	411269	junction_4	175427.843115403	NA	0	NA	TRUE	NA	NA	NA	A	coding	580	1743	183	1925	20.0	335	False	AATAAA	-33
PB.12323.1	chrX	+	3267	9	full-splice_match	ZNF185	ENST00000454925.1	3191	9	-75	-1	-75	0	multi-exon	TRUE	canonical	1	4690	junction_1	72282.6312176722	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	84	1067	25.0	NA	False	AATAAA	-15
PB.4134.2	chr16	-	1767	3	full-splice_match	METTL26	ENST00000448973.6	1710	3	-50	-7	-2	0	multi-exon	FALSE	canonical	1	976078	junction_2	454630.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	54	165	717	881	5.0	-59	True	AATAAA	-19
PB.4134.1	chr16	-	1931	1	novel_in_catalog	METTL26	novel	801	5	NA	NA	-1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	54	165	716	880	5.0	-58	True	AATAAA	-19
PB.12323.2	chrX	+	3072	8	novel_not_in_catalog	ZNF185	novel	4148	21	NA	NA	17566	0	any annotated donor/acceptor	FALSE	canonical	1	657	junction_1	77719.8059381341	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	431	874	30.0	NA	False	AATAAA	-13
PB.8224.10	chr3	+	1690	8	novel_in_catalog	MITF	novel	4814	10	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	2094	junction_2	46189.876536853786	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	134	1291	90.0	-2	True	NA	NA
PB.886.1	chr1	+	2029	2	novel_not_in_catalog	UHMK1	novel	8117	8	NA	NA	11	-20443	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	111	336	186	521	100.0	-30	True	NA	NA
PB.9439.2	chr5	-	2227	11	novel_not_in_catalog	IRF1	novel	3579	10	NA	NA	-781	82	any annotated donor/acceptor	FALSE	canonical	1	1162	junction_10	242874.60468282807	NA	1	NA	TRUE	NA	NA	NA	B	coding	325	978	302	1279	20.0	-1	True	NA	NA
PB.7563.1	chr21	+	3729	1	full-splice_match	AL844908.1	ENST00000609953.1	652	1	-3082	5	-3082	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-7468	False	NA	NA
PB.4069.1	chr15	-	2591	2	full-splice_match	PEX11A	ENST00000559170.1	905	2	29	-1715	-1	-5	multi-exon	FALSE	canonical	1	15949	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	442	750	15.0	-3	True	AATAAA	-13
PB.4069.2	chr15	-	2700	3	full-splice_match	PEX11A	ENST00000300056.7	2740	3	32	8	3	-8	multi-exon	FALSE	canonical	1	56728	junction_2	10840.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	119	862	25.0	1	True	AATAAA	-10
PB.6732.1	chr2	-	3531	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125063.01465536284	NA	30	NA	TRUE	NA	NA	NA	C	coding	142	429	33	461	25.0	-3	True	AATAAA	-17
PB.886.8	chr1	+	2066	8	full-splice_match	UHMK1	ENST00000489294.1	8478	8	-22	6434	16	-878	multi-exon	FALSE	canonical	1	279935	junction_1	89999.36959371051	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	181	1440	25.0	-25	True	AATAGA	-18
PB.8798.2	chr4	+	4135	26	full-splice_match	POLR2B	ENST00000381227.5	4108	26	-27	0	-7	0	multi-exon	FALSE	canonical	1	10981	junction_1	254076.43015872524	NA	4	1	TRUE	NA	NA	NA	C	coding	1174	3525	441	3965	15.0	-3	True	AATAAA	-16
PB.3774.4	chr15	-	4685	32	full-splice_match	PLCB2	ENST00000260402.7	4616	32	-71	2	-58	0	multi-exon	FALSE	canonical	1	26818	junction_8	99557.55466380659	NA	0	NA	TRUE	NA	NA	NA	C	coding	1185	3558	322	3879	10.0	-59	False	ATTAAA	-17
PB.3774.5	chr15	-	3431	28	incomplete-splice_match	PLCB2	ENST00000260402.7	4616	32	-68	2854	-55	1113	3prime_fragment	FALSE	canonical	1	26818	junction_4	60225.313533159395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1037	3111	319	3429	15.0	-56	False	NA	NA
PB.3774.1	chr15	-	5157	29	novel_in_catalog	PLCB2	novel	563	3	NA	NA	-66	7	intron_retention	FALSE	canonical	1	129155	junction_20	91241.50728874128	NA	1	NA	TRUE	NA	NA	NA	C	coding	995	2988	330	3317	20.0	-67	False	ATTAAA	-26
PB.3774.2	chr15	-	4637	31	full-splice_match	PLCB2	ENST00000456256.6	4242	31	-163	-232	-53	0	multi-exon	FALSE	canonical	1	51504	junction_7	94587.36525411603	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	317	3829	10.0	-54	False	ATTAAA	-19
PB.3774.3	chr15	-	5031	29	novel_in_catalog	PLCB2	novel	563	3	NA	NA	-7	0	intron_retention	FALSE	canonical	1	129155	junction_20	90878.60441013848	NA	31	4	TRUE	NA	NA	NA	C	coding	894	2685	271	2955	10.0	-8	True	ATTAAA	-17
PB.11455.1	chr9	-	2488	2	full-splice_match	DMAC1	ENST00000358227.4	2755	2	265	2	265	-2	multi-exon	FALSE	canonical	1	1421227	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	69	407	10.0	4	True	AATAAA	-28
PB.7424.2	chr20	-	3245	2	intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11343	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	764	False	NA	NA
PB.6488.15	chr2	-	3816	27	incomplete-splice_match	USP34	ENST00000398571.6	11357	80	-3	124158	-3	27954	3prime_fragment	FALSE	canonical	1	146864	junction_26	61774.90293547915	NA	1	NA	TRUE	NA	NA	NA	C	coding	1245	3735	81	3815	65.0	-38	True	NA	NA
PB.8924.1	chr4	-	2141	11	full-splice_match	LEF1	ENST00000510624.5	1472	11	420	-1089	0	-5	multi-exon	FALSE	canonical	1	47559	junction_10	84105.2613734123	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	22	933	35.0	-1	True	AATAAA	-18
PB.8924.3	chr4	-	3417	12	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	20	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	91124.66817126037	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	1095	2210	35.0	-5	True	AATAAA	-17
PB.8924.4	chr4	-	2863	12	novel_in_catalog	LEF1	novel	3068	12	NA	NA	-142	-5	combination_of_known_junctions	FALSE	canonical	1	47559	junction_11	78210.81334846288	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	660	1655	35.0	-1	True	AATAAA	-18
PB.8924.6	chr4	-	7027	10	novel_in_catalog	LEF1	novel	3068	12	NA	NA	222	-4	intron_retention	FALSE	canonical	1	5635	junction_2	89587.58875970363	NA	4	NA	TRUE	NA	NA	NA	C	coding	152	459	5360	5818	35.0	-3	True	AATAAA	-19
PB.8924.8	chr4	-	3498	13	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	25	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	85496.38515372545	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	1090	2289	35.0	0	True	AATAAA	-19
PB.8924.9	chr4	-	3074	11	novel_in_catalog	LEF1	novel	3068	12	NA	NA	-52	-5	combination_of_known_junctions	FALSE	canonical	1	68630	junction_1	75828.60117165554	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	708	1952	35.0	4818	False	AATAAA	-18
PB.6338.5	chr2	-	6041	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	0	-66	combination_of_known_junctions	FALSE	canonical	1	236917	junction_8	196211.1807654971	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	257	3214	55.0	-1	True	TATAAA	-22
PB.11474.2	chr9	+	6514	32	novel_in_catalog	DENND4C	novel	6718	33	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	1	3957	junction_16	44903.185441583635	NA	1	NA	TRUE	NA	NA	NA	C	coding	1889	5670	160	5829	100.0	-1	True	NA	NA
PB.1892.11	chr11	+	2315	11	full-splice_match	PDHX	ENST00000227868.8	2389	11	72	2	3	-2	multi-exon	FALSE	canonical	1	260602	junction_8	73200.54453246915	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	13	1518	30.0	-6	True	AATAAA	-18
PB.1892.10	chr11	+	1635	1	novel_in_catalog	PDHX	novel	584	5	NA	NA	1	-42228	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-8	True	NA	NA
PB.7399.1	chr20	-	3221	21	incomplete-splice_match	LAMA5	ENST00000252999.7	11426	80	52362	94	-71	-14	5prime_fragment	TRUE	canonical	1	307729	junction_5	131580.06658833247	NA	0	NA	TRUE	NA	NA	NA	A	coding	959	2880	165	3044	20.0	NA	False	AATAAA	-19
PB.1892.12	chr11	+	1962	8	incomplete-splice_match	PDHX	ENST00000227868.8	2389	11	40811	2	-20401	-2	5prime_fragment	FALSE	canonical	1	260602	junction_5	74646.61735901271	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	686	1165	30.0	NA	False	AATAAA	-18
PB.8903.5	chr4	-	3378	18	novel_in_catalog	MANBA	novel	4238	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	10664	junction_12	76857.5214811241	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	1085	2818	30.0	-1	True	AATAAA	-20
PB.8903.7	chr4	-	3044	16	novel_in_catalog	MANBA	novel	4238	18	NA	NA	-6	-2	no_combination_of_known_junctions	FALSE	canonical	1	2293	junction_5	69874.97214069014	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	65	2485	30.0	-10	True	AATAAA	-19
PB.3994.1	chr15	-	2836	9	full-splice_match	SNUPN	ENST00000308588.9	1513	9	22	-1345	1	1345	multi-exon	FALSE	canonical	1	115877	junction_8	82216.41648864523	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	134	1216	5.0	-1	True	NA	NA
PB.3994.2	chr15	-	1422	9	full-splice_match	SNUPN	ENST00000308588.9	1513	9	82	9	-40	-3	multi-exon	FALSE	canonical	1	115877	junction_8	82216.41648864523	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	74	1156	35.0	-32	True	AATATA	-11
PB.3994.3	chr15	-	1672	9	full-splice_match	SNUPN	ENST00000564675.5	1682	9	40	-30	10	-3	multi-exon	FALSE	canonical	1	34434	junction_8	107543.13055235095	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	324	1406	35.0	-21	True	AATATA	-11
PB.10801.5	chr7	+	2418	11	novel_in_catalog	CAPZA2	novel	324	5	NA	NA	-2	1071	combination_of_known_junctions	FALSE	canonical	1	9944	junction_2	477029.0843038818	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	199	1026	25.0	-10	True	AATATA	-15
PB.3899.12	chr15	+	4804	14	full-splice_match	RNF111	ENST00000557998.5	4803	14	-7	6	-7	1	multi-exon	FALSE	canonical	1	10824	junction_1	57698.06964847059	NA	8	2	TRUE	NA	NA	NA	C	coding	994	2985	295	3279	20.0	-8549	False	AATAAA	-15
PB.11132.9	chr8	-	2297	7	novel_in_catalog	LYPLA1	novel	2585	9	NA	NA	-14	-5	combination_of_known_junctions	FALSE	canonical	1	9705	junction_4	77915.28062938333	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	56	True	AATAAA	-18
PB.3899.10	chr15	+	4549	8	incomplete-splice_match	RNF111	ENST00000559209.5	5278	14	-257	13911	18	-1221	3prime_fragment	FALSE	canonical	1	101488	junction_1	34768.2147000471	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	394	2709	85.0	0	True	NA	NA
PB.3899.11	chr15	+	5502	14	full-splice_match	RNF111	ENST00000348370.8	5913	14	44	367	22	-2	multi-exon	FALSE	canonical	1	101488	junction_1	34098.43174515934	NA	4	NA	TRUE	NA	NA	NA	C	coding	986	2961	390	3350	45.0	4	True	AATAAA	-15
PB.12208.1	chrX	+	2814	7	full-splice_match	RNF128	ENST00000255499.2	2817	7	-4	7	-4	-7	multi-exon	FALSE	canonical	1	84479	junction_5	19533.08011212432	NA	0	NA	TRUE	NA	NA	NA	A	coding	428	1287	255	1541	30.0	-682	False	AATAAA	-8
PB.10801.6	chr7	+	2257	9	novel_in_catalog	CAPZA2	novel	324	5	NA	NA	-1	1072	no_combination_of_known_junctions	FALSE	canonical	1	10639	junction_5	518004.7808778983	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	84	602	25.0	-9	True	AATATA	-16
PB.4142.4	chr16	-	1891	5	full-splice_match	RPUSD1	ENST00000565809.5	1918	5	36	-9	-1	-8	multi-exon	FALSE	canonical	1	10952	junction_2	140576.17868859397	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	88	483	30.0	4	True	AATAAA	-16
PB.11474.1	chr9	+	6618	33	full-splice_match	DENND4C	ENST00000434457.6	6718	33	361	-261	-1	1	multi-exon	FALSE	canonical	1	89595	junction_1	35135.87421664321	NA	0	NA	TRUE	NA	NA	NA	C	coding	1958	5877	56	5932	100.0	-2	True	NA	NA
PB.11132.2	chr8	-	2427	8	novel_in_catalog	LYPLA1	novel	2585	9	NA	NA	-9	-11	combination_of_known_junctions	FALSE	canonical	1	25486	junction_4	79418.15839656597	NA	11	1	TRUE	NA	NA	NA	C	coding	203	612	130	741	15.0	-9	True	AATAAA	-12
PB.3635.3	chr14	-	2651	10	full-splice_match	ASB2	ENST00000555019.5	2842	10	177	14	105	0	multi-exon	TRUE	canonical	1	94934	junction_9	22094.82177198546	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	255	2162	25.0	150	False	AATAAA	-14
PB.3635.4	chr14	-	2259	9	novel_not_in_catalog	ASB2	novel	2842	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	1216	junction_8	46330.78163580208	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	110	1771	25.0	-18	True	AATAAA	-13
PB.4142.1	chr16	-	1951	6	full-splice_match	RPUSD1	ENST00000569601.5	917	6	-33	-1001	4	7	multi-exon	FALSE	canonical	1	10714	junction_5	148158.98506050854	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	408	968	20.0	-28	True	AATAAA	-31
PB.4142.2	chr16	-	2505	5	novel_in_catalog	RPUSD1	novel	2159	5	NA	NA	7	-1	intron_retention	TRUE	canonical	1	93228	junction_4	88422.9716854591	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	143	868	25.0	-51	True	AATAAA	-23
PB.4142.3	chr16	-	2025	6	full-splice_match	RPUSD1	ENST00000007264.6	2050	6	20	5	8	-5	multi-exon	FALSE	canonical	1	93228	junction_5	96784.3460429423	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	116	1054	30.0	-24	True	AATAAA	-19
PB.21.6	chr1	+	4406	15	novel_not_in_catalog	ATAD3B	novel	2448	16	NA	NA	41	1	intron_retention	FALSE	non_canonical	0	0	junction_1	152985.33891327024	NA	13	2	TRUE	NA	NA	NA	C	coding	400	1203	1230	2432	10.0	-6039	False	AATAAA	-19
PB.9257.9	chr5	+	4150	14	novel_in_catalog	NLN	novel	8661	13	NA	NA	17	1355	combination_of_known_junctions	FALSE	canonical	1	5353	junction_1	102493.36795834055	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	337	2382	40.0	-34	True	AATAAA	-19
PB.21.4	chr1	+	2353	17	novel_not_in_catalog	ATAD3B	novel	2448	16	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	143535.37131749094	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	259	1968	10.0	-3	True	AATAAA	-18
PB.12193.1	chrX	+	1258	3	full-splice_match	BEX4	ENST00000372695.5	1328	3	16	54	-16	-54	multi-exon	FALSE	canonical	1	630390	junction_1	127483.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	120	363	220	582	30.0	0	True	AATAAA	-13
PB.1905.8	chr11	+	2041	9	novel_in_catalog	AC068205.2	novel	771	11	NA	NA	36493	16374	intron_retention	FALSE	canonical	1	3209	junction_1	287195.0808513048	NA	0	NA	TRUE	NA	NA	NA	B	coding	271	816	70	885	65.0	-3	True	NA	NA
PB.21.5	chr1	+	3364	17	novel_not_in_catalog	ATAD3B	novel	2448	16	NA	NA	13	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152849.56007521742	NA	14	2	TRUE	NA	NA	NA	C	coding	602	1809	1172	2980	10.0	1	True	AATAAA	-17
PB.7565.1	chr21	+	2830	11	novel_not_in_catalog	ADARB1	novel	5032	13	NA	NA	17759	-3959	any annotated donor/acceptor	FALSE	canonical	1	7554	junction_1	56033.846641204276	NA	0	NA	TRUE	NA	NA	NA	A	coding	790	2373	55	2427	45.0	-2921	False	AATAAA	-32
PB.11338.4	chr8	+	2620	3	full-splice_match	TRIB1	ENST00000311922.3	3635	3	39	976	39	238	multi-exon	FALSE	canonical	1	406143	junction_1	82332.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	544	1662	25.0	0	True	ATTAAA	-21
PB.1905.1	chr11	+	2240	11	full-splice_match	HSD17B12	ENST00000278353.9	2571	11	331	0	94	0	multi-exon	FALSE	canonical	1	259275	junction_4	219441.60729396783	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	162	878	35.0	94	False	NA	NA
PB.1905.2	chr11	+	2217	11	full-splice_match	HSD17B12	ENST00000278353.9	2571	11	206	148	-14	58	multi-exon	FALSE	canonical	1	259275	junction_4	219441.60729396783	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	65	1003	80.0	2	True	NA	NA
PB.1905.3	chr11	+	2356	9	novel_not_in_catalog	AC068205.2	novel	771	11	NA	NA	36381	16580	intron_retention	FALSE	canonical	1	134	junction_1	287873.99881086755	NA	0	NA	TRUE	NA	NA	NA	B	coding	270	813	182	994	35.0	-148	False	NA	NA
PB.1905.4	chr11	+	2566	13	novel_not_in_catalog	AC068205.2	novel	771	11	NA	NA	36430	16579	intron_retention	FALSE	canonical	0	0	junction_2	309193.9813949395	NA	4	NA	TRUE	NA	NA	NA	B	coding	238	717	489	1205	35.0	-45	True	NA	NA
PB.1905.5	chr11	+	2736	11	full-splice_match	HSD17B12	ENST00000278353.9	2571	11	180	-345	29	338	multi-exon	FALSE	canonical	1	259275	junction_4	219441.60729396783	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	91	1029	85.0	-3	True	NA	NA
PB.1905.6	chr11	+	2206	8	novel_in_catalog	AC068205.2	novel	771	11	NA	NA	36475	16581	intron_retention	FALSE	canonical	1	2067	junction_6	284946.60899565456	NA	4	NA	TRUE	NA	NA	NA	B	coding	251	756	88	843	30.0	0	True	NA	NA
PB.1905.7	chr11	+	2081	11	full-splice_match	HSD17B12	ENST00000278353.9	2571	11	183	307	32	-101	multi-exon	FALSE	canonical	1	259275	junction_4	219441.60729396783	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	88	1026	50.0	0	True	NA	NA
PB.8643.6	chr4	+	4460	4	full-splice_match	ZNF141	ENST00000240499.7	2970	4	-39	-1451	-18	1451	multi-exon	FALSE	canonical	1	39455	junction_2	16506.45654147357	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	189	1613	15.0	-18	True	GATAAA	-37
PB.5196.1	chr17	-	6868	33	full-splice_match	HELZ	ENST00000358691.9	13810	33	-4	6946	0	545	multi-exon	TRUE	canonical	1	104757	junction_15	43474.20883691955	NA	10	1	TRUE	NA	NA	NA	C	coding	1942	5829	172	6000	25.0	-10	True	AGTAAA	-18
PB.21.1	chr1	+	2460	16	full-splice_match	ATAD3B	ENST00000308647.7	2448	16	-11	-1	-11	1	multi-exon	FALSE	canonical	1	1356	junction_4	139282.60334404054	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	128	2074	10.0	-23	True	AATAAA	-19
PB.5196.2	chr17	-	6253	33	full-splice_match	HELZ	ENST00000358691.9	13810	33	-14	7571	-10	-37	multi-exon	FALSE	canonical	1	104757	junction_15	43474.20883691955	NA	0	NA	TRUE	NA	NA	NA	C	coding	1942	5829	182	6010	20.0	-20	True	AATAAA	-17
PB.5196.3	chr17	-	6356	34	novel_not_in_catalog	HELZ	novel	13810	33	NA	NA	-8	21	any annotated donor/acceptor	FALSE	canonical	1	4201	junction_30	60922.208234992046	NA	3	1	TRUE	NA	NA	NA	C	coding	1942	5829	227	6055	95.0	-18	True	NA	NA
PB.8961.15	chr4	-	2054	12	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	7	28	intron_retention	FALSE	canonical	1	3552814	junction_9	1117095.4997548608	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	159	650	25.0	-6	True	AATAAA	-17
PB.8643.2	chr4	+	4055	4	full-splice_match	ZNF141	ENST00000240499.7	2970	4	-54	-1031	-33	1031	multi-exon	FALSE	canonical	1	39455	junction_2	16506.45654147357	NA	3	NA	TRUE	NA	NA	NA	C	coding	474	1425	204	1628	10.0	2	True	AATACA	-22
PB.9371.15	chr5	+	5486	28	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	-29	97	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	87418.67104328421	NA	1	NA	TRUE	NA	NA	NA	C	coding	1124	3375	413	3787	45.0	1	True	AATAAA	-16
PB.9371.14	chr5	+	3219	2	incomplete-splice_match	PPIP5K2	ENST00000613674.4	4933	33	-49	69971	-49	-1137	3prime_fragment	FALSE	canonical	1	110878	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-19	True	NA	NA
PB.9371.13	chr5	+	4023	24	incomplete-splice_match	PPIP5K2	ENST00000358359.7	5813	31	68	22358	-58	6657	3prime_fragment	FALSE	canonical	1	40589	junction_2	86940.82252380243	NA	1	NA	TRUE	NA	NA	NA	C	coding	991	2976	442	3417	90.0	-28	True	NA	NA
PB.6041.2	chr19	-	1988	9	full-splice_match	CADM4	ENST00000222374.2	2178	9	15	175	15	-175	multi-exon	FALSE	canonical	1	95185	junction_8	134021.58220506876	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	35	1201	40.0	-7	True	ATTAAA	-19
PB.9371.11	chr5	+	5738	28	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	32	-3	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	87418.67104328421	NA	0	NA	TRUE	NA	NA	NA	C	coding	1124	3375	478	3852	40.0	-5	True	AATAAA	-17
PB.9371.10	chr5	+	1660	11	incomplete-splice_match	PPIP5K2	ENST00000613674.4	4933	33	-96	48449	30	-4391	3prime_fragment	FALSE	canonical	1	40589	junction_2	97092.77758767642	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1179	480	1658	70.0	-7	True	NA	NA
PB.5135.28	chr17	-	1818	4	novel_not_in_catalog	AC015813.2	novel	2270	6	NA	NA	206	-14465	intron_retention	FALSE	non_canonical	0	0	junction_3	703220.4268662849	NA	1	1	TRUE	NA	NA	NA	B	coding	61	186	310	495	40.0	593	False	AATAAA	-8
PB.5135.29	chr17	-	2096	4	full-splice_match	SRSF1	ENST00000258962.4	1513	4	69	-652	-4	-390	multi-exon	FALSE	canonical	1	1687503	junction_2	354759.4543032723	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	141	887	30.0	-54	True	AATACA	-14
PB.7037.17	chr2	+	2615	15	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	1	22181	junction_1	281269.3793909305	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	319	2448	15.0	-22	True	AGTAAA	-14
PB.8767.13	chr4	-	2303	19	incomplete-splice_match	NFXL1	ENST00000507131.5	2664	23	33	14591	33	-11812	3prime_fragment	FALSE	canonical	1	36109	junction_18	27581.92203668291	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2265	37	2301	50.0	-1	True	NA	NA
PB.1011.25	chr1	-	1685	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	134	-4	-1	4	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	103	1089	15.0	-24	True	AATAAA	-28
PB.5135.21	chr17	-	2200	4	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	1	-14464	intron_retention	FALSE	canonical	1	101795	junction_1	850296.3084493938	NA	0	NA	TRUE	NA	NA	NA	B	coding	196	591	109	699	40.0	-22	True	AATAAA	-9
PB.8643.1	chr4	+	4195	4	full-splice_match	ZNF141	ENST00000240499.7	2970	4	-58	-1167	-37	1167	multi-exon	FALSE	canonical	1	39455	junction_2	16506.45654147357	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	208	1632	25.0	-2	True	NA	NA
PB.5135.24	chr17	-	1839	5	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	0	-14464	intron_retention	FALSE	canonical	1	544443	junction_1	741075.5486819056	NA	0	NA	TRUE	NA	NA	NA	B	coding	248	747	110	856	40.0	-23	True	AATAAA	-9
PB.5135.25	chr17	-	1769	4	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	-13	-14464	intron_retention	FALSE	canonical	1	36630	junction_1	880526.5176859935	NA	0	NA	TRUE	NA	NA	NA	B	coding	201	606	123	728	40.0	-36	True	AATAAA	-9
PB.5135.26	chr17	-	2995	3	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	1	-14465	intron_retention	FALSE	canonical	1	6043	junction_2	840730.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-22	True	AATAAA	-8
PB.5135.27	chr17	-	2075	4	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	0	-14465	intron_retention	FALSE	canonical	1	6043	junction_3	701091.8829622517	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-23	True	AATAAA	-8
PB.6505.1	chr2	+	3062	8	novel_in_catalog	AFTPH	novel	4113	10	NA	NA	24	-17	intron_retention	FALSE	canonical	1	43740	junction_6	176377.33893593712	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	317	2737	100.0	1	True	NA	NA
PB.498.1	chr1	-	1669	1	full-splice_match	AL359504.2	ENST00000605506.1	1601	1	-78	10	-78	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-55	False	AATAAA	-9
PB.8961.14	chr4	-	5225	11	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-5	28	intron_retention	FALSE	canonical	1	3552814	junction_8	1163660.4141971318	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	154	561	25.0	-1	True	AATAAA	-17
PB.6505.2	chr2	+	3989	9	full-splice_match	AFTPH	ENST00000238856.8	4040	9	27	24	27	-16	multi-exon	FALSE	canonical	1	226019	junction_1	109430.72903090052	NA	1	NA	TRUE	NA	NA	NA	C	coding	909	2730	314	3043	75.0	4	True	NA	NA
PB.6505.5	chr2	+	3424	10	novel_in_catalog	AFTPH	novel	4113	10	NA	NA	43	214	intron_retention	FALSE	canonical	1	65902	junction_7	169384.61124579437	NA	1	NA	TRUE	NA	NA	NA	C	coding	937	2814	298	3111	80.0	0	True	AATACA	-30
PB.6505.4	chr2	+	6522	7	incomplete-splice_match	AFTPH	ENST00000498706.5	4674	9	-179	8818	43	-8580	3prime_fragment	FALSE	canonical	1	226019	junction_1	110573.60090706803	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	298	2832	75.0	0	True	ACTAAA	-24
PB.6488.14	chr2	-	4279	29	incomplete-splice_match	USP34	ENST00000398571.6	11357	80	21	113393	21	-23154	3prime_fragment	FALSE	canonical	1	146864	junction_28	63291.27791074576	NA	1	NA	TRUE	NA	NA	NA	C	coding	1406	4221	57	4277	30.0	-14	True	AATAAA	-27
PB.6505.6	chr2	+	3335	9	novel_in_catalog	AFTPH	novel	4113	10	NA	NA	43	212	intron_retention	FALSE	canonical	1	199375	junction_8	126023.57733748673	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	298	3024	70.0	0	True	AATACA	-28
PB.6505.9	chr2	+	5215	7	incomplete-splice_match	AFTPH	ENST00000498706.5	4674	9	-143	10089	79	-9851	3prime_fragment	FALSE	canonical	1	226019	junction_1	110573.60090706803	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	262	2796	25.0	36	True	AATAAA	-20
PB.6505.8	chr2	+	3199	1	novel_in_catalog	AFTPH	novel	4113	10	NA	NA	77	-64316	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	34	True	NA	NA
PB.11359.10	chr8	+	1884	5	novel_not_in_catalog	PTP4A3	novel	1717	6	NA	NA	-3475	2	intron_retention	FALSE	canonical	1	31868	junction_4	239176.90306862825	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	960	1406	10.0	4	True	AATAAA	-15
PB.753.2	chr1	+	1799	12	full-splice_match	SNX27	ENST00000458013.6	6403	12	26	4578	26	6	multi-exon	TRUE	canonical	1	80080	junction_1	44327.631180406155	NA	1	1	TRUE	NA	NA	NA	C	coding	541	1626	95	1720	80.0	-81	False	NA	NA
PB.6089.10	chr19	-	2312	5	incomplete-splice_match	SYMPK	ENST00000598896.5	1899	12	-20	19236	-8	-1576	3prime_fragment	FALSE	canonical	1	389458	junction_4	204817.89041777453	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	108	776	30.0	-6	True	NA	NA
PB.11697.1	chr9	+	3119	5	novel_in_catalog	NIPSNAP3A	novel	1633	6	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	321598	junction_1	97795.24278562838	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	111	566	5.0	0	True	AATAAA	-11
PB.1746.9	chr11	-	2478	5	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	2	intron_retention	FALSE	canonical	1	176052	junction_4	119044.34849327161	NA	3	NA	TRUE	NA	NA	NA	C	coding	121	366	1672	2037	25.0	-1	True	AATAAA	-12
PB.1746.8	chr11	-	2007	10	full-splice_match	IRF7	ENST00000330243.9	1992	10	21	-36	1	0	multi-exon	FALSE	canonical	1	176052	junction_9	97933.85220924993	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	367	1917	10.0	0	True	AATAAA	-16
PB.1746.5	chr11	-	2137	9	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	176052	junction_8	96897.73329263178	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	1413	2045	10.0	-1	True	AATAAA	-18
PB.1746.7	chr11	-	1747	10	novel_in_catalog	IRF7	novel	1554	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	66743	junction_5	124851.01850793663	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	1023	1655	10.0	9170	False	AATAAA	-18
PB.1746.6	chr11	-	2061	10	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	176052	junction_9	92000.0008886205	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	1337	1969	10.0	-1	True	AATAAA	-18
PB.1746.1	chr11	-	2223	8	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	1	intron_retention	TRUE	canonical	1	176052	junction_7	101327.32851707956	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	1498	2130	10.0	-1	True	AATAAA	-19
PB.6178.4	chr19	-	3144	5	full-splice_match	ZNF616	ENST00000330123.9	2563	5	-192	-389	-16	389	multi-exon	FALSE	canonical	1	1611	junction_1	23440.459466486573	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	1616	2161	15.0	-1	True	NA	NA
PB.1746.3	chr11	-	2307	7	novel_in_catalog	IRF7	novel	1554	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	176052	junction_6	108900.55538578916	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	1583	2215	10.0	-1	True	AATAAA	-18
PB.1746.2	chr11	-	2394	6	novel_in_catalog	IRF7	novel	1554	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	176052	junction_5	113674.17864862714	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	1582	1947	10.0	0	True	AATAAA	-18
PB.6478.1	chr2	+	1900	13	novel_in_catalog	VRK2	novel	2657	19	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	34560	junction_1	84208.3343715982	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	199	1725	45.0	-58	True	AATAAA	-16
PB.12386.6	chrY	-	3658	20	full-splice_match	UTY	ENST00000329134.9	4325	20	668	-1	-24	1	multi-exon	FALSE	canonical	1	5804	junction_1	21003.073605303725	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3177	401	3577	20.0	-16	True	AATAAA	-20
PB.12386.7	chrY	-	1957	7	full-splice_match	UTY	ENST00000382893.2	1539	7	-46	-372	-46	372	multi-exon	FALSE	canonical	1	50974	junction_1	9315.238316269148	NA	5	NA	TRUE	NA	NA	NA	C	coding	186	561	423	983	95.0	-38	True	NA	NA
PB.12386.4	chrY	-	4995	28	full-splice_match	UTY	ENST00000331397.8	6529	28	659	875	-36	602	multi-exon	FALSE	canonical	1	19502	junction_1	17105.70568260377	NA	1	NA	TRUE	NA	NA	NA	C	coding	1326	3981	413	4393	40.0	-28	True	AATAAA	-25
PB.12386.5	chrY	-	4241	25	full-splice_match	UTY	ENST00000362096.8	4990	25	683	66	-9	-66	multi-exon	FALSE	canonical	1	30407	junction_13	15440.24263980465	NA	0	NA	TRUE	NA	NA	NA	C	coding	1219	3660	386	4045	20.0	-1	True	ATTAAA	-19
PB.12386.2	chrY	-	4619	28	novel_not_in_catalog	UTY	novel	6574	29	NA	NA	-42	13799	any annotated donor/acceptor	FALSE	canonical	1	25050	junction_1	16596.085398165735	NA	0	NA	TRUE	NA	NA	NA	C	coding	1400	4200	419	4618	10.0	-34	True	NA	NA
PB.12386.3	chrY	-	5875	28	full-splice_match	UTY	ENST00000331397.8	6529	28	650	4	-45	-4	multi-exon	FALSE	canonical	1	19502	junction_1	17105.70568260377	NA	0	NA	TRUE	NA	NA	NA	C	coding	1326	3981	422	4402	15.0	-37	True	NA	NA
PB.12386.1	chrY	-	4752	29	novel_not_in_catalog	UTY	novel	6574	29	NA	NA	-38	13801	any annotated donor/acceptor	FALSE	canonical	1	13475	junction_16	19145.788081160947	NA	0	NA	TRUE	NA	NA	NA	C	coding	1446	4338	415	4752	15.0	-30	True	NA	NA
PB.2601.6	chr12	-	3110	17	full-splice_match	RACGAP1	ENST00000454520.6	3080	17	-36	6	0	-6	multi-exon	FALSE	canonical	1	97337	junction_16	132389.13499787048	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	114	2012	40.0	15	True	AGTAAA	-11
PB.1884.9	chr11	-	1157	4	full-splice_match	CD59	ENST00000642928.1	7631	4	47	6427	-19	119	multi-exon	FALSE	canonical	1	1660115	junction_3	1407304.2109518785	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	82	468	5.0	1	True	NA	NA
PB.2601.5	chr12	-	3198	18	novel_not_in_catalog	RACGAP1	novel	387	3	NA	NA	3	-6	any annotated donor/acceptor	FALSE	canonical	1	9779	junction_12	150516.2636338368	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	82	2100	40.0	-23	True	AGTAAA	-11
PB.2601.2	chr12	-	3199	18	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	3623	junction_17	150294.2366376644	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	200	2098	25.0	3	True	AGTAAA	-14
PB.2601.3	chr12	-	2959	16	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	19633	junction_1	128606.61806012248	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	69	1817	25.0	-10	True	AGTAAA	-14
PB.2601.1	chr12	-	3536	18	novel_not_in_catalog	RACGAP1	novel	387	3	NA	NA	-1	329	any annotated donor/acceptor	FALSE	canonical	1	529	junction_15	151426.08563489278	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	233	2101	95.0	-11	True	NA	NA
PB.6478.4	chr2	+	3668	9	novel_in_catalog	VRK2	novel	2657	19	NA	NA	3	-25167	combination_of_known_junctions	FALSE	canonical	1	34560	junction_1	95991.2107317644	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	183	1046	100.0	-42	True	NA	NA
PB.1884.2	chr11	-	5291	4	full-splice_match	CD59	ENST00000642928.1	7631	4	67	2273	1	-2273	multi-exon	FALSE	canonical	1	1660115	junction_3	1407304.2109518785	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	62	448	30.0	-2	True	AATAAA	-18
PB.1884.3	chr11	-	2006	2	novel_not_in_catalog	AL049629.2	novel	572	4	NA	NA	2869	-2591	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	2881	False	AATAAA	-18
PB.1884.4	chr11	-	3311	4	full-splice_match	CD59	ENST00000642928.1	7631	4	57	4263	-9	1597	multi-exon	FALSE	canonical	1	1660115	junction_3	1407304.2109518785	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	72	458	15.0	28	False	NA	NA
PB.1884.5	chr11	-	2058	6	full-splice_match	CD59	ENST00000395850.8	737	6	-3	-1318	0	192	multi-exon	FALSE	canonical	1	4349	junction_5	2105271.261010381	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	224	610	15.0	-3	True	AATAGA	-20
PB.2601.8	chr12	-	3274	18	novel_not_in_catalog	RACGAP1	novel	387	3	NA	NA	4	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	160870.49378697897	NA	10	1	TRUE	NA	NA	NA	C	coding	672	2019	158	2176	40.0	-22	True	AGTAAA	-11
PB.2601.9	chr12	-	3216	18	novel_not_in_catalog	RACGAP1	novel	387	3	NA	NA	3	-6	any annotated donor/acceptor	FALSE	canonical	1	1967	junction_12	151280.89906647123	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	1069	2118	40.0	-64	False	AGTAAA	-11
PB.10988.1	chr8	+	2351	6	antisense	novelGene_ENPP7P6_AS_novelGene_AC068587.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	517	junction_2	30093.413614277793	NA	1	NA	FALSE	NA	NA	NA	A	coding	107	324	1255	1578	10.0	NA	False	NA	NA
PB.10779.8	chr7	+	2989	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	445	998	0	983	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	23	1498	35.0	-3	True	AATAAA	-13
PB.6342.1	chr2	-	3933	7	full-splice_match	LDAH	ENST00000237822.7	2907	7	13	-1039	0	-1	multi-exon	FALSE	canonical	1	99451	junction_6	22146.691405765836	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	68	1045	10.0	-1	True	TTTAAA	-23
PB.5630.13	chr19	-	2094	13	full-splice_match	DPP9	ENST00000597849.5	2025	13	-68	-1	2	1	multi-exon	FALSE	canonical	1	191669	junction_12	99481.58315361693	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	234	1790	15.0	-50	True	NA	NA
PB.5630.12	chr19	-	2742	16	incomplete-splice_match	DPP9	ENST00000262960.13	4295	22	52	12900	2	166	3prime_fragment	FALSE	canonical	1	191669	junction_15	91780.37485635659	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	227	2119	80.0	-43	True	NA	NA
PB.5630.11	chr19	-	3525	22	full-splice_match	DPP9	ENST00000262960.13	4295	22	43	727	0	-189	multi-exon	FALSE	canonical	1	191669	junction_21	82882.71470606896	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	236	2914	65.0	-52	True	NA	NA
PB.5630.10	chr19	-	3646	22	full-splice_match	DPP9	ENST00000262960.13	4295	22	86	563	5	-25	multi-exon	FALSE	canonical	1	191669	junction_21	82882.71470606896	NA	1	NA	TRUE	NA	NA	NA	C	coding	892	2679	193	2871	85.0	-9	True	NA	NA
PB.8578.21	chr3	-	2282	11	novel_not_in_catalog	IGF2BP2	novel	3688	16	NA	NA	1767	-449	any annotated donor/acceptor	FALSE	canonical	1	55	junction_10	74747.50016957089	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	144	1175	65.0	1748	False	AAAACA	-28
PB.6478.9	chr2	+	5104	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	-7	3163	intron_retention	FALSE	canonical	1	34560	junction_1	111777.46916400487	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	144	1337	80.0	-3	True	NA	NA
PB.6511.2	chr2	-	2399	6	full-splice_match	RAB1A	ENST00000409784.7	2447	6	47	1	27	-1	multi-exon	FALSE	canonical	1	674809	junction_4	307029.88118318387	NA	7	NA	TRUE	NA	NA	NA	C	coding	205	618	145	762	15.0	335	False	AATAAA	-18
PB.8874.22	chr4	-	2313	6	incomplete-splice_match	PPM1K	ENST00000608933.5	6484	7	176	6269	1	-1312	3prime_fragment	FALSE	canonical	1	105597	junction_5	62073.18302906658	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	215	1273	15.0	0	True	NA	NA
PB.8961.11	chr4	-	3135	11	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	0	28	intron_retention	FALSE	canonical	1	3552814	junction_8	1171619.6152984125	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	166	657	25.0	-13	True	AATAAA	-17
PB.10779.4	chr7	+	4811	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	418	-797	-27	797	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	50	1525	25.0	-30	False	AATAAA	-17
PB.6511.4	chr2	-	2218	4	full-splice_match	RAB1A	ENST00000398529.7	1198	4	-5	-1015	0	-1	multi-exon	FALSE	canonical	1	27031	junction_1	490935.58396279335	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	192	581	15.0	-7	True	AATAAA	-18
PB.6342.5	chr2	-	3280	8	novel_in_catalog	LDAH	novel	3663	5	NA	NA	1	-4	intron_retention	FALSE	canonical	1	18737	junction_1	44895.75246033406	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	55	1032	20.0	12	True	TTTAAA	-6
PB.11448.6	chr9	-	2494	1	full-splice_match	RANBP6	ENST00000259569.5	4576	1	-21	2103	-14	352	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	820	2460	33	2492	60.0	-25	False	TTTAAA	-21
PB.10779.5	chr7	+	3461	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	433	538	-12	-538	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	35	1510	25.0	-15	False	ATTAAA	-19
PB.8532.2	chr3	+	2915	18	full-splice_match	MFN1	ENST00000471841.5	5224	18	26	2283	-17	152	multi-exon	FALSE	canonical	1	71715	junction_5	97209.49252108876	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	101	2326	30.0	-17	True	GATAAA	-18
PB.6606.4	chr2	+	3389	4	full-splice_match	MRPL35	ENST00000337109.8	3727	4	6	332	0	-276	multi-exon	FALSE	canonical	1	434181	junction_1	18074.395413278853	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	29	595	35.0	0	True	AATACA	-10
PB.8798.9	chr4	+	3662	24	full-splice_match	POLR2B	ENST00000431623.6	3666	24	4	0	-1	0	multi-exon	FALSE	canonical	1	12918	junction_2	257205.8136506223	NA	1	NA	TRUE	NA	NA	NA	C	coding	1099	3300	193	3492	15.0	4	True	AATAAA	-16
PB.1460.2	chr10	+	2019	2	full-splice_match	DDIT4	ENST00000471240.1	521	2	-96	-1402	-2	1	multi-exon	FALSE	canonical	1	2781192	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	760	1170	15.0	-1	True	AATAAA	-18
PB.1460.3	chr10	+	1642	3	full-splice_match	DDIT4	ENST00000307365.3	1748	3	100	6	1	-6	multi-exon	FALSE	canonical	1	2088391	junction_2	346400.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	102	800	30.0	-1596	False	AATAAA	-11
PB.1460.1	chr10	+	1276	1	incomplete-splice_match	DDIT4	ENST00000307365.3	1748	3	835	6	736	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	136	411	24	434	30.0	-861	False	AATAAA	-11
PB.12113.4	chrX	-	2790	3	full-splice_match	LINC01278	ENST00000609143.5	2768	3	-21	-1	1	0	multi-exon	FALSE	canonical	1	93961	junction_1	17538.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	360	2431	2790	5.0	-14	True	NA	NA
PB.12113.5	chrX	-	2375	2	novel_not_in_catalog	LINC01278	novel	554	4	NA	NA	-7	-4	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	118	354	2021	2374	10.0	-3	True	NA	NA
PB.12113.2	chrX	-	2964	4	full-splice_match	LINC01278	ENST00000609401.5	2886	4	-78	0	0	0	multi-exon	FALSE	canonical	1	44997	junction_2	20668.485339332976	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	360	2605	2964	5.0	-15	True	NA	NA
PB.12113.3	chrX	-	2926	4	novel_not_in_catalog	LINC01278	novel	554	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	11350	junction_3	36748.724534177905	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	360	2567	2926	5.0	-14	True	NA	NA
PB.12113.1	chrX	-	3104	5	novel_not_in_catalog	LINC01278	novel	554	4	NA	NA	-4	0	any annotated donor/acceptor	TRUE	canonical	1	12561	junction_3	32248.00111634828	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	360	2745	3104	5.0	-19	True	NA	NA
PB.8961.10	chr4	-	6328	10	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-14	28	intron_retention	FALSE	canonical	1	3552814	junction_7	1226517.4507877633	NA	4	NA	TRUE	NA	NA	NA	C	coding	135	408	183	590	25.0	-30	False	AATAAA	-17
PB.6605.6	chr2	-	2554	14	novel_in_catalog	IMMT	novel	2613	15	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	210	junction_5	255426.61022899888	NA	2	1	TRUE	NA	NA	NA	B	coding	348	1047	81	1127	35.0	-22	True	AATAAA	-11
PB.11792.4	chr9	+	2744	9	novel_not_in_catalog	PBX3	novel	2755	8	NA	NA	-618	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125424.98374825488	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	103	1158	25.0	19	True	AATAAA	-18
PB.6605.4	chr2	-	2690	14	novel_not_in_catalog	IMMT	novel	2613	15	NA	NA	-29	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	231785.8891014386	NA	17	2	TRUE	NA	NA	NA	B	coding	380	1143	120	1262	35.0	-1	True	AATAAA	-12
PB.11310.1	chr8	-	6087	4	novel_in_catalog	TNFRSF11B	novel	2402	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	196574	junction_3	27564.245971910786	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	65	529	5.0	-1	True	ATTAAA	-19
PB.6605.2	chr2	-	3497	13	novel_not_in_catalog	IMMT	novel	2613	15	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	237319.49205886223	NA	10	1	TRUE	NA	NA	NA	B	coding	416	1251	80	1330	35.0	-21	True	AATAAA	-12
PB.6605.3	chr2	-	2651	14	novel_in_catalog	IMMT	novel	2613	15	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	7891	junction_4	232340.73582446884	NA	0	NA	TRUE	NA	NA	NA	B	coding	753	2262	62	2323	35.0	-3	True	AATAAA	-12
PB.6605.1	chr2	-	2664	14	novel_not_in_catalog	IMMT	novel	2613	15	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	233540.3387015619	NA	1	1	TRUE	NA	NA	NA	B	coding	391	1176	61	1236	35.0	-2	True	AATAAA	-12
PB.8473.49	chr3	+	2084	3	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	39	356	combination_of_known_junctions	FALSE	canonical	1	44741	junction_1	31579.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	7	True	AATAAA	-27
PB.1011.20	chr1	-	2076	12	novel_not_in_catalog	UCHL5	novel	5327	11	NA	NA	23	291	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	249700.6238361225	NA	13	3	TRUE	NA	NA	NA	C	coding	220	663	127	789	30.0	-48	True	AATAAA	-32
PB.6605.8	chr2	-	2119	14	novel_not_in_catalog	IMMT	novel	2613	15	NA	NA	0	-522	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	247019.44885648365	NA	1	1	TRUE	NA	NA	NA	B	coding	379	1140	83	1222	20.0	-24	True	TATAAA	-18
PB.6605.9	chr2	-	2154	6	incomplete-splice_match	IMMT	ENST00000474969.5	1431	10	-13	10940	2	1475	3prime_fragment	FALSE	canonical	1	340241	junction_3	74682.33769399562	NA	0	NA	TRUE	NA	NA	NA	B	coding	220	663	67	729	30.0	-8	True	AATAAA	-18
PB.7397.5	chr20	+	2496	15	novel_in_catalog	OSBPL2	novel	582	3	NA	NA	1	184	combination_of_known_junctions	FALSE	canonical	1	2374	junction_2	133709.04958499805	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	546	1223	40.0	1	True	GATAAA	-5
PB.7397.4	chr20	+	3918	14	full-splice_match	OSBPL2	ENST00000313733.8	4010	14	61	31	-3	-21	multi-exon	FALSE	canonical	1	260023	junction_9	44817.694220107995	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	181	1623	25.0	-18	True	AATAAA	-16
PB.7397.6	chr20	+	3861	14	full-splice_match	OSBPL2	ENST00000313733.8	4010	14	63	86	-1	-31	multi-exon	FALSE	canonical	1	260023	junction_9	44817.694220107995	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	179	1621	30.0	-16	True	CATAAA	-19
PB.7397.1	chr20	+	3865	13	full-splice_match	OSBPL2	ENST00000644775.1	2449	13	-68	-1348	0	0	multi-exon	FALSE	canonical	1	5389	junction_2	88903.05273266774	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	298	1539	15.0	-36	True	NA	NA
PB.7397.3	chr20	+	3292	13	novel_not_in_catalog	OSBPL2	novel	582	3	NA	NA	-1	11	intron_retention	FALSE	canonical	0	0	junction_7	97448.11562181721	NA	2	1	TRUE	NA	NA	NA	C	coding	279	840	1456	2295	40.0	-17	True	ATTAAA	-12
PB.3450.14	chr14	-	2581	19	incomplete-splice_match	WDHD1	ENST00000360586.7	5996	26	-24	24042	4	-21721	3prime_fragment	FALSE	canonical	1	127999	junction_12	28672.33699324701	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2490	91	2580	55.0	-3	True	NA	NA
PB.8961.13	chr4	-	2622	12	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-5	-9	intron_retention	FALSE	canonical	1	3552814	junction_9	1212701.485662731	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	154	1140	70.0	-1	True	ACTAAA	-32
PB.11792.5	chr9	+	2456	9	novel_not_in_catalog	PBX3	novel	2755	8	NA	NA	-582	-289	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125424.98374825488	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	100	1155	85.0	-8933	False	NA	NA
PB.1832.7	chr11	-	2185	8	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-10	-11095	intron_retention	FALSE	canonical	1	109636	junction_7	747723.520270258	NA	0	NA	TRUE	NA	NA	NA	B	coding	124	375	1497	1871	10.0	31	True	AATAAA	-18
PB.1832.6	chr11	-	1602	10	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-27	-11095	intron_retention	FALSE	canonical	1	56453	junction_9	843572.6363729942	NA	0	NA	TRUE	NA	NA	NA	B	coding	238	717	572	1288	10.0	14	True	AATAAA	-18
PB.1832.5	chr11	-	1815	8	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-31	-11094	intron_retention	FALSE	canonical	1	1418528	junction_1	397062.469158346	NA	0	NA	TRUE	NA	NA	NA	B	coding	124	375	1126	1500	10.0	10	True	AATAAA	-19
PB.1832.4	chr11	-	2100	9	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-9	-11094	intron_retention	FALSE	canonical	1	56453	junction_8	858717.659802394	NA	0	NA	TRUE	NA	NA	NA	B	coding	124	375	1411	1785	10.0	32	True	AATAAA	-19
PB.1832.3	chr11	-	1162	10	full-splice_match	PSMA1	ENST00000396394.6	1505	10	342	1	5	-1	multi-exon	FALSE	canonical	1	1418528	junction_1	545927.4848863363	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	56	847	10.0	31	True	AATAAA	-19
PB.1832.2	chr11	-	1266	10	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-10	-11094	intron_retention	FALSE	canonical	1	35328	junction_9	848839.7818970969	NA	0	NA	TRUE	NA	NA	NA	B	coding	238	717	235	951	10.0	31	True	AATAAA	-19
PB.1832.1	chr11	-	1582	10	full-splice_match	PSMA1	ENST00000530457.5	1527	10	-19	-36	0	-1	multi-exon	FALSE	canonical	1	109636	junction_9	830399.4875213993	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	551	1267	10.0	3	True	AATAAA	-19
PB.10383.10	chr7	-	1060	4	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	TRUE	canonical	1	44	junction_3	23064410.412817016	NA	4	1	TRUE	NA	NA	NA	C	coding	107	324	145	468	45.0	-1	True	AATAAA	-13
PB.8473.42	chr3	+	3434	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	127	525	no_combination_of_known_junctions	FALSE	canonical	1	22145	junction_1	338956.2341305299	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	968	2116	80.0	-810	False	NA	NA
PB.1011.23	chr1	-	2103	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	2	275	combination_of_known_junctions	FALSE	canonical	1	13196	junction_2	225953.99160664366	NA	8	1	TRUE	NA	NA	NA	C	coding	316	951	100	1050	30.0	-21	True	AATAAA	-16
PB.6619.1	chr2	-	3317	7	intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	150	453	230	682	25.0	NA	False	NA	NA
PB.1832.9	chr11	-	2070	9	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-12	-11095	intron_retention	FALSE	canonical	1	109636	junction_8	844805.9522294806	NA	0	NA	TRUE	NA	NA	NA	B	coding	124	375	1382	1756	10.0	29	True	AATAAA	-18
PB.1832.8	chr11	-	2127	9	novel_in_catalog	AC018523.2	novel	1221	12	NA	NA	-123316	-11095	intron_retention	TRUE	canonical	1	19283	junction_7	903050.3132038104	NA	2	NA	TRUE	NA	NA	NA	B	coding	124	375	1439	1813	10.0	1	True	AATAAA	-18
PB.10383.12	chr7	-	2245	5	full-splice_match	ACTB	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	1	16600346	junction_3	13515478.32997814	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	892	1653	45.0	-1	True	AATAAA	-13
PB.8473.40	chr3	+	5672	11	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	38	0	no_combination_of_known_junctions	FALSE	canonical	1	22145	junction_1	392401.3405369686	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	1057	2259	25.0	-899	False	AATAAA	-37
PB.8961.12	chr4	-	3119	12	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-5	28	intron_retention	FALSE	canonical	1	3552814	junction_9	1189436.25901314	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	154	882	25.0	-1	True	AATAAA	-17
PB.3541.1	chr14	+	5551	23	incomplete-splice_match	PAPLN	ENST00000554301.5	4090	26	6467	-1865	-3693	-1	5prime_fragment	FALSE	canonical	1	19373	junction_14	10772.843808441408	NA	0	NA	TRUE	NA	NA	NA	A	coding	1073	3222	375	3596	40.0	1	True	AATAAA	-13
PB.4647.6	chr17	-	4212	31	novel_in_catalog	MYO1C	novel	4724	32	NA	NA	-4	11	intron_retention	FALSE	canonical	1	200692	junction_30	231198.218869283	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	54	2780	85.0	-5	True	NA	NA
PB.4647.7	chr17	-	4116	32	full-splice_match	MYO1C	ENST00000361007.7	4714	32	-21	619	-21	11	multi-exon	FALSE	canonical	1	119543	junction_31	236735.82697225458	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	135	3221	85.0	982	False	NA	NA
PB.4647.4	chr17	-	4074	32	full-splice_match	MYO1C	ENST00000648446.1	4724	32	5	645	5	11	multi-exon	FALSE	canonical	1	200692	junction_31	228526.59386818137	NA	2	NA	TRUE	NA	NA	NA	C	coding	1044	3135	45	3179	85.0	4	True	NA	NA
PB.4647.5	chr17	-	4239	33	novel_not_in_catalog	MYO1C	novel	4724	32	NA	NA	-369	11	any annotated donor/acceptor	FALSE	canonical	1	5383	junction_32	288519.332856617	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	258	3344	85.0	5395	False	NA	NA
PB.4647.2	chr17	-	3802	33	novel_not_in_catalog	MYO1C	novel	4724	32	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	273174.0865131553	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	71	3205	25.0	-22	True	AATAAA	-17
PB.4647.3	chr17	-	4447	32	incomplete-splice_match	MYO1C	ENST00000646049.1	4159	33	4224	-11	-465	11	5prime_fragment	FALSE	canonical	1	11683	junction_31	248509.40451743634	NA	1	NA	TRUE	NA	NA	NA	C	coding	1028	3087	466	3552	85.0	5299	False	NA	NA
PB.4647.1	chr17	-	4722	32	full-splice_match	MYO1C	ENST00000648446.1	4724	32	0	2	0	-2	multi-exon	FALSE	canonical	1	200692	junction_31	228526.59386818137	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	50	3184	25.0	-1	True	AATAAA	-17
PB.6732.20	chr2	-	2298	4	full-splice_match	POLR2D	ENST00000272645.8	5042	4	27	2717	-11	431	multi-exon	FALSE	canonical	1	110087	junction_1	86276.65554868632	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	31	459	20.0	-1	True	AATAAA	-14
PB.1011.22	chr1	-	2226	12	novel_not_in_catalog	UCHL5	novel	5327	11	NA	NA	1	275	any annotated donor/acceptor	FALSE	canonical	1	5894	junction_9	242177.86975354218	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	484	1359	30.0	-10	True	AATAAA	-16
PB.6732.22	chr2	-	1912	4	full-splice_match	POLR2D	ENST00000272645.8	5042	4	15	3115	15	33	multi-exon	FALSE	canonical	1	110087	junction_1	86276.65554868632	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	43	471	35.0	-13	True	AATAAA	-16
PB.6782.9	chr2	-	3533	14	full-splice_match	STAM2	ENST00000263904.4	5701	14	250	1918	-1	1713	multi-exon	FALSE	canonical	1	138483	junction_13	48716.85664175444	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	101	1678	75.0	19	True	NA	NA
PB.6732.23	chr2	-	1822	3	full-splice_match	POLR2D	ENST00000409955.1	1758	3	-31	-33	9	33	multi-exon	FALSE	canonical	1	31274	junction_1	135286.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	49	381	35.0	-19	True	AATAAA	-16
PB.7711.1	chr22	-	3374	1	full-splice_match	AC005005.3	ENST00000609017.1	1410	1	-1965	1	-1965	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	coding	132	399	576	974	15.0	4247	False	NA	NA
PB.10383.18	chr7	-	1874	6	full-splice_match	ACTB	ENST00000493945.6	1495	6	1	-380	0	0	multi-exon	FALSE	canonical	1	46086	junction_5	18879973.598357312	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	155	1282	45.0	-1	True	AATAAA	-13
PB.6732.24	chr2	-	1617	2	full-splice_match	POLR2D	ENST00000487079.1	1037	2	-5	-575	-5	33	multi-exon	FALSE	canonical	1	28788	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	25	357	35.0	5	True	AATAAA	-16
PB.136.4	chr1	-	1089	9	full-splice_match	CAPZB	ENST00000264202.7	858	9	-59	-172	3	1	multi-exon	FALSE	canonical	1	2718118	junction_8	500819.58432726486	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	99	917	5.0	-4	True	AATAAA	-16
PB.136.5	chr1	-	5255	4	incomplete-splice_match	CAPZB	ENST00000264202.7	858	9	-53	34176	9	469	3prime_fragment	FALSE	canonical	1	2718118	junction_3	184624.93462212037	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	93	425	85.0	2	True	NA	NA
PB.6950.4	chr2	+	2138	1	full-splice_match	FZD7	ENST00000286201.2	3859	1	1714	7	1714	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-3774	False	AATAAA	-15
PB.136.1	chr1	-	2424	8	novel_in_catalog	CAPZB	novel	2068	9	NA	NA	2	0	intron_retention	FALSE	canonical	1	2718118	junction_7	505077.0015680575	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	100	789	5.0	-5	True	NA	NA
PB.136.2	chr1	-	1586	9	full-splice_match	CAPZB	ENST00000264202.7	858	9	-22	-706	-11	-1	multi-exon	FALSE	canonical	1	2718118	junction_8	500819.58432726486	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	62	880	85.0	-23	True	AAGAAA	-35
PB.5421.2	chr18	-	2952	14	novel_not_in_catalog	TMEM241	novel	1404	16	NA	NA	-1	1	intron_retention	TRUE	canonical	0	0	junction_7	18095.436702539715	NA	15	2	TRUE	NA	NA	NA	C	coding	290	873	89	961	25.0	20	True	AATAAA	-13
PB.3039.1	chr13	+	2376	1	full-splice_match	AL355001.2	ENST00000620617.1	1191	1	-12	-1173	-12	1173	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	144	435	1	435	90.0	6	True	NA	NA
PB.6710.1	chr2	+	3247	6	full-splice_match	INSIG2	ENST00000245787.8	2590	6	-20	-637	2	-332	multi-exon	FALSE	canonical	1	60805	junction_1	124467.96279107327	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	227	904	40.0	-17	True	AATAAA	-27
PB.1804.1	chr11	-	4441	21	novel_not_in_catalog	ST5	novel	3019	19	NA	NA	15	0	intron_retention	FALSE	canonical	1	830	junction_9	80614.42759796474	NA	8	1	TRUE	NA	NA	NA	C	coding	827	2484	242	2725	10.0	252	False	AATAAA	-25
PB.1804.2	chr11	-	4361	20	full-splice_match	ST5	ENST00000313726.10	4507	20	145	1	-10	0	multi-exon	FALSE	canonical	1	76740	junction_19	55773.98680631921	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3414	205	3618	10.0	-23	True	AATAAA	-25
PB.1804.3	chr11	-	4262	19	novel_in_catalog	ST5	novel	3019	19	NA	NA	-16	0	intron_retention	FALSE	canonical	1	3822	junction_18	66434.35328750026	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	646	3519	10.0	-29	True	AATAAA	-25
PB.1804.4	chr11	-	4397	21	novel_in_catalog	ST5	novel	3019	19	NA	NA	22	-2	intron_retention	FALSE	canonical	1	1502	junction_20	70771.35373318431	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3414	243	3656	15.0	426	False	AATAAA	-23
PB.1804.5	chr11	-	3121	19	full-splice_match	ST5	ENST00000530438.5	2679	19	299	-741	30	-2	multi-exon	FALSE	canonical	1	28273	junction_17	67935.19576866282	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	227	2380	15.0	-45	True	AATAAA	-23
PB.6710.7	chr2	+	2175	5	novel_not_in_catalog	INSIG2	novel	574	5	NA	NA	36	-1	intron_retention	FALSE	canonical	0	0	junction_1	159325.98860100476	NA	2	1	TRUE	NA	NA	NA	C	coding	150	453	18	470	15.0	-8023	False	ATTAAA	-20
PB.6710.6	chr2	+	2488	5	novel_in_catalog	INSIG2	novel	574	5	NA	NA	-2	4	intron_retention	FALSE	canonical	1	3004	junction_4	112093.43309127212	NA	4	NA	TRUE	NA	NA	NA	C	coding	205	618	209	826	15.0	1	True	ATTAAA	-17
PB.8099.11	chr3	+	1826	16	novel_in_catalog	ARIH2	novel	598	3	NA	NA	2	-14	combination_of_known_junctions	FALSE	canonical	1	9194	junction_2	194105.88556780608	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	225	1490	85.0	-19	True	NA	NA
PB.6710.8	chr2	+	2305	5	novel_not_in_catalog	INSIG2	novel	574	5	NA	NA	29	3	intron_retention	FALSE	non_canonical	0	0	junction_1	159325.98860100476	NA	3	1	TRUE	NA	NA	NA	C	coding	117	354	251	604	15.0	32	True	ATTAAA	-16
PB.8738.3	chr4	+	3333	15	full-splice_match	FAM114A1	ENST00000358869.4	4050	15	-71	788	-6	-788	multi-exon	FALSE	canonical	1	41554	junction_1	113096.77548844022	NA	4	NA	TRUE	NA	NA	NA	C	coding	563	1692	248	1939	30.0	-691	False	AATAAA	-34
PB.5906.8	chr19	-	2223	3	novel_not_in_catalog	CEP89	novel	5678	19	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	37102.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	1175	1618	15.0	0	True	NA	NA
PB.2823.8	chr12	+	3551	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	12	-31	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	1	1	TRUE	NA	NA	NA	C	coding	454	1365	278	1642	35.0	-41	True	AATAAA	-18
PB.2823.9	chr12	+	3300	8	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	12	-68	intron_retention	FALSE	non_canonical	0	0	junction_7	305691.57755676366	NA	6	2	TRUE	NA	NA	NA	C	coding	382	1149	278	1426	30.0	-41	True	AATAAA	-16
PB.5906.3	chr19	-	2604	19	full-splice_match	CEP89	ENST00000305768.9	5678	19	-3	3077	-3	1	multi-exon	FALSE	canonical	1	62853	junction_7	29450.018705898605	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	93	2444	25.0	-12	True	AATAAA	-24
PB.2823.5	chr12	+	3431	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	27	-68	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	210	1574	30.0	27	True	AATAAA	-16
PB.2823.6	chr12	+	2841	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	11	-68	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	6	2	TRUE	NA	NA	NA	C	coding	454	1365	279	1643	30.0	-42	True	AATAAA	-16
PB.2823.7	chr12	+	4631	3	incomplete-splice_match	TMPO	ENST00000266732.8	3615	4	-39	7	12	-7	intron_retention	FALSE	canonical	1	586861	junction_2	30358.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	1793	3346	15.0	-41	True	AATAAA	-14
PB.5906.7	chr19	-	3049	1	novel_in_catalog	CEP89	novel	5678	19	NA	NA	-3	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	147	444	2001	2444	15.0	-4	True	NA	NA
PB.5906.6	chr19	-	2884	2	full-splice_match	CEP89	ENST00000591863.1	2903	2	19	0	3	0	multi-exon	FALSE	canonical	1	74205	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	1835	2278	10.0	-18	True	NA	NA
PB.2823.2	chr12	+	2526	7	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	0	-66	intron_retention	FALSE	non_canonical	0	0	junction_6	303898.7158113794	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	290	1327	25.0	-53	True	AATAAA	-18
PB.2823.3	chr12	+	3604	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-1	-33	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	252	1616	30.0	-15	True	AATAAA	-16
PB.1418.7	chr10	+	4919	6	full-splice_match	TFAM	ENST00000373895.7	973	6	-20	-3926	-20	-7	multi-exon	FALSE	canonical	1	60141	junction_4	307563.13493043993	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	135	779	40.0	2	True	AATAAA	-17
PB.1690.1	chr10	+	1569	13	novel_in_catalog	PLEKHA1	novel	603	5	NA	NA	30	-358	no_combination_of_known_junctions	FALSE	canonical	1	45872	junction_1	82729.3951303821	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	172	1386	75.0	18	True	AATATA	-8
PB.1418.5	chr10	+	1538	7	full-splice_match	TFAM	ENST00000487519.5	5414	7	390	3486	-22	447	multi-exon	FALSE	canonical	1	346620	junction_4	196542.8889739393	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	137	877	40.0	0	True	AATAAA	-14
PB.1418.4	chr10	+	1839	6	full-splice_match	TFAM	ENST00000373895.7	973	6	-24	-842	-24	842	multi-exon	FALSE	canonical	1	60141	junction_4	307563.13493043993	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	139	783	50.0	-2	True	NA	NA
PB.1418.3	chr10	+	5035	7	full-splice_match	TFAM	ENST00000487519.5	5414	7	388	-9	-24	9	multi-exon	FALSE	canonical	1	346620	junction_4	196542.8889739393	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	139	879	20.0	-2	True	AATAAA	-33
PB.1418.2	chr10	+	4780	6	full-splice_match	TFAM	ENST00000373895.7	973	6	-24	-3783	-24	-150	multi-exon	FALSE	canonical	1	60141	junction_4	307563.13493043993	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	139	783	40.0	-2	True	AATAAA	-20
PB.1418.1	chr10	+	4875	7	full-splice_match	TFAM	ENST00000487519.5	5414	7	388	151	-24	-151	multi-exon	FALSE	canonical	1	346620	junction_4	196542.8889739393	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	139	879	35.0	-2	True	AATAAA	-19
PB.11792.1	chr9	+	2605	10	novel_not_in_catalog	PBX3	novel	2755	8	NA	NA	-651	-289	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121924.51937020019	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	136	1440	85.0	-14	True	NA	NA
PB.9389.1	chr5	+	3073	3	intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	87	junction_1	1234.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	53	162	192	353	20.0	0	True	NA	NA
PB.6732.2	chr2	-	3512	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-13	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125063.01465536284	NA	6	NA	TRUE	NA	NA	NA	C	coding	142	429	33	461	25.0	-3	True	AATAAA	-16
PB.1418.9	chr10	+	6164	7	full-splice_match	TFAM	ENST00000487519.5	5414	7	403	-1153	-9	1153	multi-exon	FALSE	canonical	1	346620	junction_4	196542.8889739393	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	124	864	100.0	13	True	NA	NA
PB.1418.8	chr10	+	1827	7	full-splice_match	TFAM	ENST00000487519.5	5414	7	496	3091	84	842	multi-exon	FALSE	canonical	1	346620	junction_4	196542.8889739393	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	31	771	50.0	-6425	False	NA	NA
PB.6037.2	chr19	-	2175	16	novel_in_catalog	XRCC1	novel	2802	17	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	184120	junction_7	102675.86762355061	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	121	1014	40.0	4918	False	AATAAA	-16
PB.6037.1	chr19	-	2105	17	full-splice_match	XRCC1	ENST00000262887.9	2802	17	440	257	-3	15	multi-exon	FALSE	canonical	1	184120	junction_7	99728.53714660786	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	109	2010	35.0	-40	True	AATAAA	-31
PB.1690.2	chr10	+	3878	13	novel_in_catalog	PLEKHA1	novel	603	5	NA	NA	-50	-4	no_combination_of_known_junctions	FALSE	canonical	1	45872	junction_1	82729.3951303821	NA	3	NA	TRUE	NA	NA	NA	C	coding	404	1215	252	1466	15.0	-29	True	AATAAA	-20
PB.2833.3	chr12	+	7679	57	incomplete-splice_match	UTP20	ENST00000261637.4	9025	62	-4	7141	-4	-7141	3prime_fragment	FALSE	canonical	1	62178	junction_6	35625.53096771786	NA	0	NA	TRUE	NA	NA	NA	C	coding	2500	7500	179	7678	65.0	-4	True	NA	NA
PB.2833.2	chr12	+	2526	12	incomplete-splice_match	UTP20	ENST00000261637.4	9025	62	-10	90046	-10	5143	3prime_fragment	FALSE	canonical	1	62178	junction_6	26555.702144052535	NA	3	NA	TRUE	NA	NA	NA	C	coding	477	1434	185	1618	90.0	-10	True	NA	NA
PB.2833.1	chr12	+	4146	31	incomplete-splice_match	UTP20	ENST00000261637.4	9025	62	-20	47720	-20	9551	3prime_fragment	TRUE	canonical	1	62178	junction_6	29094.395786359502	NA	1	NA	TRUE	NA	NA	NA	C	coding	1317	3951	195	4145	70.0	-113	False	NA	NA
PB.2833.6	chr12	+	8402	62	full-splice_match	UTP20	ENST00000261637.4	9025	62	2	621	2	-621	multi-exon	FALSE	canonical	1	62178	junction_6	41194.680378179415	NA	0	NA	TRUE	NA	NA	NA	C	coding	2743	8229	173	8401	70.0	2	True	NA	NA
PB.2833.5	chr12	+	9028	62	full-splice_match	UTP20	ENST00000261637.4	9025	62	2	-5	2	5	multi-exon	FALSE	canonical	1	62178	junction_6	41194.680378179415	NA	2	NA	TRUE	NA	NA	NA	C	coding	2785	8358	173	8530	30.0	2	True	AATAAA	-21
PB.2833.4	chr12	+	6291	46	incomplete-splice_match	UTP20	ENST00000261637.4	9025	62	0	20999	0	-20999	3prime_fragment	FALSE	canonical	1	62178	junction_6	31158.055136487503	NA	0	NA	TRUE	NA	NA	NA	C	coding	2039	6117	175	6291	60.0	0	True	NA	NA
PB.10149.3	chr6	-	2909	5	full-splice_match	CD164	ENST00000324953.9	2936	5	-25	52	-12	-52	multi-exon	FALSE	canonical	1	262486	junction_1	910038.5344325742	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	92	628	40.0	-3	True	ATTAAA	-13
PB.4971.1	chr17	-	641	2	incomplete-splice_match	KRT10	ENST00000269576.5	2124	8	3532	2	-80	-2	5prime_fragment	FALSE	canonical	1	6032273	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	11	36	349	384	30.0	-9	True	AATAAA	-20
PB.10149.5	chr6	-	2937	6	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	-222	-2	intron_retention	FALSE	canonical	1	2051	junction_5	951899.0191015853	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	3	602	20.0	795	False	AATAAA	-20
PB.10149.4	chr6	-	2975	6	full-splice_match	CD164	ENST00000504373.2	2992	6	15	2	15	-2	multi-exon	FALSE	canonical	1	6819	junction_5	950090.5393623073	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	173	640	20.0	1194	False	AATAAA	-20
PB.7975.1	chr3	-	2418	1	antisense	novelGene_UBE2E2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10149.6	chr6	-	2675	7	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	-12	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	884852.5991059032	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	92	685	20.0	-3	True	AATAAA	-20
PB.10989.11	chr8	-	3467	13	novel_not_in_catalog	LONRF1	novel	3594	12	NA	NA	26	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	67819.21518819763	NA	4	NA	TRUE	NA	NA	NA	B	coding	745	2238	45	2282	30.0	40	True	AATAAA	-12
PB.9747.10	chr6	-	1555	3	novel_not_in_catalog	TBC1D7	novel	2229	8	NA	NA	5	-434	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	18144.0	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	10	True	NA	NA
PB.9747.11	chr6	-	2976	2	novel_not_in_catalog	TBC1D7	novel	2229	8	NA	NA	6	-434	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-2	True	NA	NA
PB.8707.1	chr4	-	3616	14	novel_not_in_catalog	TAPT1	novel	4591	14	NA	NA	218	-791	any annotated donor/acceptor	TRUE	canonical	1	602	junction_13	67124.85099420395	NA	3	1	TRUE	NA	NA	NA	A	coding	517	1554	51	1604	45.0	-291	False	AATAAA	-22
PB.8513.14	chr3	-	3351	15	full-splice_match	PHC3	ENST00000495893.6	12666	15	3	9312	1	-1675	multi-exon	FALSE	canonical	1	110362	junction_14	52892.59553446445	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	30	3017	40.0	-12	True	TATAAA	-14
PB.5865.9	chr19	-	3937	24	novel_in_catalog	ATP13A1	novel	2431	2	NA	NA	9	-1	intron_retention	FALSE	canonical	1	127672	junction_13	163962.12822490925	NA	2	NA	TRUE	NA	NA	NA	C	coding	572	1719	2001	3719	30.0	-9	True	AATAAA	-17
PB.5865.8	chr19	-	3519	26	full-splice_match	ATP13A1	ENST00000357324.10	3861	26	341	1	-120	-1	multi-exon	FALSE	canonical	1	300355	junction_25	146177.57928328132	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	371	3301	30.0	323	False	AATAAA	-17
PB.5865.6	chr19	-	3188	23	novel_not_in_catalog	ATP13A1	novel	2431	2	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	146505.45598579381	NA	2	1	TRUE	NA	NA	NA	C	coding	1059	3177	10	3186	30.0	0	True	AATAAA	-18
PB.5865.5	chr19	-	3863	25	novel_in_catalog	ATP13A1	novel	2431	2	NA	NA	8	0	intron_retention	FALSE	canonical	1	127672	junction_13	162403.35815398864	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	1926	3644	30.0	-10	True	AATAAA	-18
PB.5865.4	chr19	-	3875	26	novel_not_in_catalog	ATP13A1	novel	2431	2	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	20992	junction_24	170879.71392393654	NA	0	NA	TRUE	NA	NA	NA	C	coding	1215	3648	10	3657	30.0	0	True	AATAAA	-17
PB.5865.3	chr19	-	3932	27	novel_not_in_catalog	ATP13A1	novel	2431	2	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	956	junction_23	204944.45040681577	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	1995	3713	30.0	-4	True	AATAAA	-18
PB.9739.1	chr6	+	3713	4	novel_not_in_catalog	TMEM170B	novel	8362	3	NA	NA	-579	-4722	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43425.37158032029	NA	0	NA	TRUE	NA	NA	NA	B	coding	132	399	74	472	25.0	-12	True	AATAAA	-18
PB.1011.29	chr1	-	2251	11	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	23	677	combination_of_known_junctions	FALSE	canonical	1	44416	junction_1	201098.20792162718	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	13	1167	15.0	601	False	AATAAA	-17
PB.8358.4	chr3	-	3139	16	novel_not_in_catalog	ITGB5	novel	4372	15	NA	NA	-88	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	328452.9128602353	NA	4	1	TRUE	NA	NA	NA	B	coding	799	2400	95	2494	50.0	-1	True	AGTAAA	-5
PB.8358.1	chr3	-	3071	15	novel_not_in_catalog	ITGB5	novel	4372	15	NA	NA	18	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	314259.3355900424	NA	2	NA	TRUE	NA	NA	NA	B	coding	691	2076	323	2398	5.0	-1	True	ATTAAA	-26
PB.4004.2	chr15	+	2651	6	novel_in_catalog	RCN2	novel	6347	7	NA	NA	-21	42	intron_retention	FALSE	canonical	1	667341	junction_1	255600.81089808772	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	126	806	10.0	-32	True	ATTAAA	-17
PB.8762.10	chr4	+	3230	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	1	1218	1	-971	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	194	2203	40.0	-23	True	ATTAAA	-27
PB.10699.1	chr7	+	1744	8	full-splice_match	CPSF4	ENST00000436336.6	1738	8	22	-28	-2	-1	multi-exon	FALSE	canonical	1	157827	junction_6	106148.77771028622	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	140	874	30.0	-2	True	ATTAAA	-11
PB.11340.10	chr8	+	1874	3	novel_not_in_catalog	MYC	novel	2042	3	NA	NA	1027	6	any annotated donor/acceptor	FALSE	canonical	1	376	junction_1	610238.0	NA	1	1	TRUE	NA	NA	NA	C	coding	439	1320	73	1392	10.0	9	True	AATAAA	-42
PB.10699.3	chr7	+	3347	7	novel_in_catalog	CPSF4	novel	1738	8	NA	NA	-3	1	intron_retention	FALSE	canonical	1	262247	junction_2	82697.93516366254	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	141	908	35.0	-3	True	ATTAAA	-13
PB.10699.2	chr7	+	1828	8	full-splice_match	CPSF4	ENST00000292476.9	1691	8	-132	-5	-5	5	multi-exon	FALSE	canonical	1	153030	junction_6	107318.2725174164	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	143	952	30.0	-5	True	ATTAAA	-17
PB.6027.8	chr19	-	2042	16	novel_not_in_catalog	POU2F2	novel	6901	14	NA	NA	467	21	any annotated donor/acceptor	FALSE	canonical	1	1644	junction_10	69996.35887279344	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	786	1913	75.0	9714	False	NA	NA
PB.6027.9	chr19	-	2009	15	novel_in_catalog	POU2F2	novel	6901	14	NA	NA	-4	21	combination_of_known_junctions	FALSE	canonical	1	12587	junction_2	56071.185140872854	NA	1	NA	TRUE	NA	NA	NA	C	coding	602	1809	72	1880	75.0	-6	False	NA	NA
PB.12250.3	chrX	-	1686	2	full-splice_match	C1GALT1C1	ENST00000304661.5	1613	2	39	-112	39	112	multi-exon	FALSE	canonical	1	279277	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	201	1157	60.0	-58	True	ATTAAA	-11
PB.6027.4	chr19	-	2050	14	full-splice_match	POU2F2	ENST00000526816.6	3218	14	-59	1227	-8	61	multi-exon	FALSE	canonical	1	41398	junction_1	49122.99513014463	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	76	1515	85.0	-10	False	NA	NA
PB.6027.5	chr19	-	2038	15	full-splice_match	POU2F2	ENST00000342301.8	3730	15	28	1664	8	61	multi-exon	FALSE	canonical	1	12587	junction_2	55624.30227968743	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	38	1798	85.0	-3	True	NA	NA
PB.6027.6	chr19	-	1992	14	full-splice_match	POU2F2	ENST00000389341.9	6901	14	2	4907	0	61	multi-exon	FALSE	canonical	1	41398	junction_1	48487.64774344397	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	66	1457	85.0	0	True	NA	NA
PB.6027.7	chr19	-	2473	13	novel_not_in_catalog	POU2F2	novel	6901	14	NA	NA	335	21	intron_retention	FALSE	canonical	1	7543	junction_12	55194.031307930694	NA	6	1	TRUE	NA	NA	NA	C	coding	439	1320	217	1536	75.0	22	True	NA	NA
PB.8720.9	chr4	+	2753	10	full-splice_match	PI4K2B	ENST00000264864.7	3540	10	37	750	37	-750	multi-exon	FALSE	canonical	1	155094	junction_1	59408.46131052336	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	153	1598	30.0	-21	True	NA	NA
PB.6027.1	chr19	-	2197	14	novel_not_in_catalog	POU2F2	novel	6901	14	NA	NA	310	78	any annotated donor/acceptor	FALSE	canonical	1	7543	junction_13	57721.40456819674	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	242	1645	75.0	-3	True	NA	NA
PB.6027.2	chr19	-	2439	13	novel_in_catalog	POU2F2	novel	6901	14	NA	NA	10	61	intron_retention	FALSE	canonical	1	46909	junction_1	44122.506115234304	NA	2	NA	TRUE	NA	NA	NA	C	coding	451	1356	36	1391	85.0	-1	True	NA	NA
PB.6027.3	chr19	-	2104	15	novel_in_catalog	POU2F2	novel	6901	14	NA	NA	-1	61	combination_of_known_junctions	FALSE	canonical	1	12587	junction_2	56071.185140872854	NA	4	NA	TRUE	NA	NA	NA	C	coding	602	1809	56	1864	85.0	10	False	NA	NA
PB.750.10	chr1	-	4813	18	novel_in_catalog	POGZ	novel	6152	17	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	595	junction_3	122584.0655138187	NA	1	NA	TRUE	NA	NA	NA	C	coding	1391	4176	335	4510	80.0	-41	True	TTTAAA	-32
PB.2467.1	chr12	+	1853	1	full-splice_match	SMIM10L1	ENST00000622602.1	4795	1	-58	3000	-58	-3000	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-31	True	AATAAA	-6
PB.2467.2	chr12	+	2045	1	full-splice_match	SMIM10L1	ENST00000622602.1	4795	1	-40	2790	-40	-2790	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-13	True	NA	NA
PB.2467.3	chr12	+	3111	3	novel_not_in_catalog	AC244131.2	novel	512	2	NA	NA	-41043	19572	intron_retention	FALSE	canonical	1	1010	junction_2	5544.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	100	303	182	484	35.0	-19	True	AATAAA	-13
PB.2467.4	chr12	+	2203	1	full-splice_match	SMIM10L1	ENST00000622602.1	4795	1	-30	2622	-30	-2622	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	ATTAAA	-23
PB.2467.5	chr12	+	3229	1	full-splice_match	SMIM10L1	ENST00000622602.1	4795	1	-15	1581	-15	-1581	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	12	True	AATAAA	-23
PB.7499.6	chr21	-	2413	8	full-splice_match	TMEM50B	ENST00000442441.5	982	8	-26	-1405	-14	-7	multi-exon	FALSE	canonical	1	18925	junction_3	134693.76653379778	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	167	622	20.0	-20	True	AATAAA	-16
PB.7499.7	chr21	-	2256	7	novel_not_in_catalog	TMEM50B	novel	3062	9	NA	NA	1	-7	any annotated donor/acceptor	FALSE	canonical	1	904	junction_3	149863.27213126267	NA	12	1	TRUE	NA	NA	NA	C	coding	114	345	1648	1992	20.0	0	True	AATAAA	-16
PB.6839.4	chr2	+	2812	20	incomplete-splice_match	ITGA6	ENST00000264107.11	5618	26	102	16571	102	-269	3prime_fragment	FALSE	canonical	1	344563	junction_15	108641.86424564925	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2679	133	2811	25.0	-23	False	GATAAA	-18
PB.8441.1	chr3	-	3196	1	incomplete-splice_match	GK5	ENST00000392993.6	9837	16	64442	443	16344	-443	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.3363.1	chr14	-	3987	6	full-splice_match	STXBP6	ENST00000323944.9	4132	6	150	-5	-83	-1	multi-exon	FALSE	canonical	1	29865	junction_5	50305.19293114777	NA	2	NA	TRUE	NA	NA	NA	A	coding	210	633	303	935	25.0	-1	True	ATTAAA	-19
PB.12090.8	chrX	-	5732	26	full-splice_match	KDM5C	ENST00000375379.7	5245	26	210	-697	-4	25	multi-exon	FALSE	canonical	1	397692	junction_2	100206.26075183926	NA	2	1	TRUE	NA	NA	NA	C	coding	1557	4674	324	4997	30.0	-6	True	AAAAAG	-25
PB.12090.9	chrX	-	5719	26	full-splice_match	KDM5C	ENST00000375401.7	6031	26	192	120	-22	-15	multi-exon	FALSE	canonical	1	304302	junction_2	108558.19136965022	NA	3	1	TRUE	NA	NA	NA	C	coding	1560	4683	342	5024	85.0	-24	False	AATAAA	-32
PB.11763.8	chr9	-	1954	7	full-splice_match	STOM	ENST00000286713.6	3010	7	-99	1155	0	538	multi-exon	FALSE	canonical	1	696589	junction_6	241903.70189493222	NA	8	NA	TRUE	NA	NA	NA	C	coding	288	867	118	984	20.0	-24	False	AATACA	-16
PB.2572.15	chr12	+	2102	16	incomplete-splice_match	PFKM	ENST00000547587.5	2867	22	12073	0	-2637	0	5prime_fragment	FALSE	canonical	1	684403	junction_1	168822.46920931138	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	309	1706	5.0	-1999	False	AATAAA	-19
PB.6606.6	chr2	+	2037	4	full-splice_match	MRPL35	ENST00000337109.8	3727	4	6	1684	0	-728	multi-exon	FALSE	canonical	1	434181	junction_1	18074.395413278853	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	29	595	25.0	0	True	ATTAAA	-15
PB.866.14	chr1	-	2411	11	full-splice_match	ARHGAP30	ENST00000490279.5	2265	11	-145	-1	-3	1	multi-exon	FALSE	canonical	1	21165	junction_9	104250.77809090924	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1770	642	2411	60.0	6533	False	NA	NA
PB.12090.1	chrX	-	5662	27	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	-25	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	154531.7960237486	NA	3	1	TRUE	NA	NA	NA	C	coding	1560	4683	345	5027	15.0	-27	False	AATAAA	-29
PB.12090.2	chrX	-	3964	20	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	-4	-9	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	152173.76569160842	NA	2	NA	TRUE	NA	NA	NA	C	coding	989	2970	324	3293	35.0	-6	True	AATAAA	-22
PB.12090.3	chrX	-	5903	27	novel_in_catalog	KDM5C	novel	6096	24	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	1	23717	junction_26	174618.52679199283	NA	2	NA	TRUE	NA	NA	NA	C	coding	1392	4179	919	5097	35.0	0	True	AATAAA	-22
PB.12090.4	chrX	-	5817	26	full-splice_match	KDM5C	ENST00000375401.7	6031	26	205	9	-9	-9	multi-exon	FALSE	canonical	1	304302	junction_2	108558.19136965022	NA	2	1	TRUE	NA	NA	NA	C	coding	1560	4683	329	5011	35.0	-11	True	AATAAA	-22
PB.12090.5	chrX	-	3193	16	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	1	-10	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	167915.25897978686	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	319	2523	30.0	-1	True	AATAAA	-21
PB.12090.6	chrX	-	5752	27	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	1	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	173391.02654661532	NA	1	1	TRUE	NA	NA	NA	C	coding	1559	4680	319	4998	30.0	-1	True	AATAAA	-21
PB.866.13	chr1	-	2420	11	novel_in_catalog	ARHGAP30	novel	4857	10	NA	NA	2	3	no_combination_of_known_junctions	FALSE	canonical	1	16945	junction_10	105000.79831048904	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1770	649	2418	60.0	-23	True	NA	NA
PB.8224.14	chr3	+	4450	9	full-splice_match	MITF	ENST00000314557.10	1798	9	9	-2661	4	-7	multi-exon	FALSE	canonical	1	36483	junction_1	28602.855573952314	NA	2	1	TRUE	NA	NA	NA	C	coding	413	1242	128	1369	20.0	4	True	ATTAAA	-13
PB.3373.3	chr14	+	4223	2	novel_in_catalog	ARHGAP5	novel	583	3	NA	NA	-249	3282	intron_retention	FALSE	canonical	1	2487	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3699	525	4223	65.0	-15	True	AAGAAA	-13
PB.3373.2	chr14	+	3383	2	novel_in_catalog	ARHGAP5	novel	583	3	NA	NA	-291	2400	no_combination_of_known_junctions	FALSE	canonical	1	2487	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2817	567	3383	75.0	-2408	False	NA	NA
PB.3373.1	chr14	+	1622	2	novel_in_catalog	ARHGAP5	novel	583	3	NA	NA	-372	558	no_combination_of_known_junctions	FALSE	canonical	1	2487	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	975	648	1622	65.0	-2489	False	AATACA	-25
PB.7485.4	chr21	+	4527	5	full-splice_match	BACH1	ENST00000286800.7	5669	5	-32	1174	-32	-1174	multi-exon	FALSE	canonical	1	120279	junction_1	106007.32492733697	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	176	2386	20.0	-1939	False	GATAAA	-40
PB.2477.3	chr12	+	2920	2	incomplete-splice_match	CDKN1B	ENST00000477087.1	453	4	2310	-1164	244	-3	5prime_fragment	FALSE	canonical	1	486194	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	473	1012	35.0	-7	True	AATAAA	-17
PB.2477.2	chr12	+	2860	3	full-splice_match	CDKN1B	ENST00000228872.8	2657	3	227	-430	227	430	multi-exon	FALSE	canonical	1	486194	junction_2	186822.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	490	1086	35.0	-8624	False	ATTAAA	-19
PB.2477.1	chr12	+	2254	3	full-splice_match	CDKN1B	ENST00000228872.8	2657	3	399	4	-299	-4	multi-exon	FALSE	canonical	1	486194	junction_2	186822.5	NA	8	NA	TRUE	NA	NA	NA	C	coding	198	597	318	914	30.0	-8452	False	AATAAA	-16
PB.3373.4	chr14	+	3799	2	incomplete-splice_match	ARHGAP5	ENST00000556611.5	4824	7	8	60790	8	3132	3prime_fragment	FALSE	canonical	1	31414	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1183	3549	251	3799	75.0	-43	True	NA	NA
PB.6625.1	chr2	+	3617	2	novel_not_in_catalog	AC009237.3	novel	1427	2	NA	NA	146	-8	intron_retention	FALSE	canonical	1	1282	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	110	333	1663	1995	90.0	-73	False	NA	NA
PB.3373.9	chr14	+	3144	6	novel_in_catalog	ARHGAP5	novel	583	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	558	junction_1	79856.70173604718	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	151	876	30.0	-51	True	ATTAAA	-17
PB.3373.8	chr14	+	6203	7	full-splice_match	ARHGAP5	ENST00000539826.6	4881	7	-26	-1296	-8	-700	multi-exon	FALSE	canonical	1	31414	junction_1	67273.6339214703	NA	20	1	TRUE	NA	NA	NA	C	coding	1501	4506	267	4772	20.0	-59	True	AGTAAA	-28
PB.9945.3	chr6	+	2282	11	full-splice_match	DEF6	ENST00000316637.6	2262	11	-22	2	-22	-2	multi-exon	FALSE	canonical	1	214698	junction_7	93184.58988958421	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	28	1923	20.0	12	True	AATAAA	-17
PB.7485.9	chr21	+	5459	5	full-splice_match	BACH1	ENST00000286800.7	5669	5	50	160	50	-160	multi-exon	FALSE	canonical	1	120279	junction_1	106007.32492733697	NA	3	NA	TRUE	NA	NA	NA	C	coding	736	2211	94	2304	25.0	-1	True	AATAAA	-23
PB.7323.4	chr20	+	3820	16	novel_in_catalog	PCIF1	novel	2747	17	NA	NA	-48	-5	intron_retention	FALSE	canonical	1	275969	junction_2	68178.24630774834	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	1905	3557	25.0	-13	True	AATACA	-12
PB.7323.5	chr20	+	2632	17	novel_not_in_catalog	PCIF1	novel	2747	17	NA	NA	-47	-5	any annotated donor/acceptor	FALSE	canonical	1	9057	junction_16	109702.68707048325	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	307	2244	25.0	-12	True	AATACA	-12
PB.7323.6	chr20	+	2661	17	novel_not_in_catalog	PCIF1	novel	2747	17	NA	NA	-44	-5	any annotated donor/acceptor	FALSE	canonical	1	3767	junction_12	110153.44856834941	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	304	1653	25.0	-9	True	AATACA	-12
PB.7323.7	chr20	+	2584	16	novel_in_catalog	PCIF1	novel	2747	17	NA	NA	-42	-6	no_combination_of_known_junctions	FALSE	canonical	1	4763	junction_14	103866.96511818482	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	302	2035	25.0	-7	True	AATACA	-11
PB.860.16	chr1	+	2805	5	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	26171	junction_3	204069.22394542373	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	55	1155	45.0	1	True	NA	NA
PB.7323.1	chr20	+	2804	17	novel_not_in_catalog	PCIF1	novel	2747	17	NA	NA	50	-6	any annotated donor/acceptor	FALSE	canonical	1	8906	junction_2	108481.36090978875	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	428	2542	25.0	-20	True	AATACA	-11
PB.7323.2	chr20	+	2690	17	full-splice_match	PCIF1	ENST00000372409.7	2747	17	51	6	51	-6	multi-exon	FALSE	canonical	1	275969	junction_2	66431.62080654343	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	314	2428	25.0	-19	True	AATACA	-11
PB.7323.3	chr20	+	2763	18	novel_not_in_catalog	PCIF1	novel	2747	17	NA	NA	-50	-5	any annotated donor/acceptor	FALSE	canonical	1	16455	junction_11	130490.2081050038	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	310	1356	25.0	-15	True	AATACA	-12
PB.6475.2	chr2	+	3027	5	novel_not_in_catalog	CFAP36	novel	1373	11	NA	NA	-3	-3710	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	211273.09409979303	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	152	574	85.0	-67	True	NA	NA
PB.860.19	chr1	+	2272	5	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	26171	junction_3	238155.29502669052	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	55	624	50.0	1	True	NA	NA
PB.7323.8	chr20	+	2600	17	novel_not_in_catalog	PCIF1	novel	2747	17	NA	NA	598	-5	any annotated donor/acceptor	FALSE	canonical	1	4695	junction_1	110777.29234818883	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	223	2337	25.0	-9136	False	AATACA	-12
PB.9153.4	chr5	-	3066	12	full-splice_match	ANKH	ENST00000284268.7	8214	12	18	5130	18	1158	multi-exon	FALSE	canonical	1	403506	junction_11	85305.66218163911	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	321	1799	75.0	10	True	ACTAAA	-36
PB.8647.5	chr4	+	2520	10	novel_in_catalog	TMEM175	novel	525	5	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	97415	junction_3	112585.61613651854	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	1475	2362	15.0	-3	True	NA	NA
PB.4413.22	chr16	+	2697	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	4	5498	4	0	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	90	2648	30.0	0	True	NA	NA
PB.993.8	chr1	+	3567	19	novel_in_catalog	SWT1	novel	3001	19	NA	NA	-20	-272	combination_of_known_junctions	FALSE	canonical	1	11155	junction_1	13108.12714078136	NA	1	NA	TRUE	NA	NA	NA	C	coding	900	2703	175	2877	25.0	-8917	False	AATAAA	-13
PB.11021.2	chr8	+	2065	9	novel_in_catalog	SORBS3	novel	3459	21	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	241241	junction_1	184130.42699635326	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	15	True	AATAAA	-14
PB.2498.23	chr12	-	2609	15	novel_not_in_catalog	RECQL	novel	3702	15	NA	NA	12	-117	intron_retention	FALSE	canonical	1	6430	junction_9	151311.76611829211	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	520	2334	20.0	-49	True	TTTAAA	-37
PB.2498.22	chr12	-	2872	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	16	105	combination_of_known_junctions	FALSE	canonical	1	32243	junction_15	141781.72780527428	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	426	2375	75.0	-45	True	NA	NA
PB.5548.1	chr19	+	2709	9	full-splice_match	PALM	ENST00000338448.9	2725	9	15	1	15	-1	multi-exon	FALSE	canonical	1	79137	junction_1	67809.53027183937	NA	0	NA	TRUE	NA	NA	NA	A	coding	387	1164	32	1195	10.0	-3	True	AATAAA	-17
PB.4320.2	chr16	+	6806	23	novel_in_catalog	TNRC6A	novel	454	3	NA	NA	-26	89	combination_of_known_junctions	FALSE	canonical	1	38958	junction_4	108741.16273196452	NA	3	NA	TRUE	NA	NA	NA	C	coding	1854	5565	174	5738	90.0	18	True	NA	NA
PB.2498.25	chr12	-	2503	16	full-splice_match	RECQL	ENST00000421138.6	2572	16	-62	131	-18	-131	multi-exon	FALSE	canonical	1	85686	junction_15	132580.6780516008	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	293	2242	30.0	-19	True	TTTAAA	-23
PB.4320.1	chr16	+	6704	23	novel_in_catalog	TNRC6A	novel	454	3	NA	NA	-30	-17	combination_of_known_junctions	TRUE	canonical	1	38958	junction_4	108741.16273196452	NA	2	NA	TRUE	NA	NA	NA	C	coding	1854	5565	178	5742	85.0	14	True	NA	NA
PB.8396.10	chr3	-	4561	19	incomplete-splice_match	PIK3R4	ENST00000356763.7	5015	20	0	1581	0	5	3prime_fragment	FALSE	canonical	1	128251	junction_18	51660.430940098304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1304	3915	559	4473	35.0	-7	True	AATAAA	-21
PB.263.4	chr1	-	2459	13	full-splice_match	YARS	ENST00000373477.8	3238	13	771	8	-65	-3	multi-exon	FALSE	canonical	1	1113252	junction_9	212210.4848634304	NA	7	1	TRUE	NA	NA	NA	C	coding	528	1587	139	1725	25.0	-25	True	AATAAA	-8
PB.263.7	chr1	-	2387	12	novel_in_catalog	YARS	novel	2247	4	NA	NA	-66	0	intron_retention	FALSE	canonical	1	8402	junction_8	467145.61847925285	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	140	1645	15.0	-26	True	AATAAA	-16
PB.263.6	chr1	-	2498	14	novel_in_catalog	YARS	novel	2247	4	NA	NA	-49	0	intron_retention	FALSE	canonical	1	26014	junction_8	551981.5950833376	NA	4	NA	TRUE	NA	NA	NA	C	coding	318	957	800	1756	15.0	-9	True	AATAAA	-16
PB.263.1	chr1	-	2878	13	full-splice_match	YARS	ENST00000373477.8	3238	13	824	-464	-12	462	multi-exon	FALSE	canonical	1	1113252	junction_9	212210.4848634304	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	86	1672	25.0	28	True	ATTAAA	-28
PB.4413.24	chr16	+	3116	8	incomplete-splice_match	LONP2	ENST00000285737.8	8199	15	5	78225	5	-24159	3prime_fragment	FALSE	canonical	1	260164	junction_1	73287.59303773938	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	89	1564	85.0	1	True	NA	NA
PB.263.3	chr1	-	2990	12	novel_in_catalog	YARS	novel	2247	4	NA	NA	-94	0	intron_retention	FALSE	canonical	1	1113252	junction_8	218816.2494059025	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	1437	2246	20.0	5	True	AATAAA	-18
PB.263.2	chr1	-	2116	11	novel_in_catalog	YARS	novel	2247	4	NA	NA	-32	3	intron_retention	FALSE	canonical	1	16324	junction_10	491679.2670274902	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	413	1369	20.0	8	True	AATAAA	-21
PB.2498.26	chr12	-	2478	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	10	-138	combination_of_known_junctions	FALSE	canonical	1	34343	junction_15	141407.75922410417	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	275	2224	40.0	-51	True	TTTAAA	-16
PB.263.9	chr1	-	2494	12	novel_in_catalog	YARS	novel	2247	4	NA	NA	-43	-1	intron_retention	FALSE	canonical	1	1113252	junction_8	218816.2494059025	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	1386	2195	30.0	-3	True	AATATA	-16
PB.11936.1	chrM	+	1355	1	full-splice_match	MT-CYB	ENST00000361789.2	1141	1	0	-214	0	214	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	NA	NA
PB.11936.2	chrM	+	1140	1	full-splice_match	MT-CYB	ENST00000361789.2	1141	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	AAAACA	-18
PB.11832.5	chr9	-	1840	12	novel_not_in_catalog	SPOUT1	novel	4286	12	NA	NA	-1	24	any annotated donor/acceptor	FALSE	canonical	1	24145	junction_2	104064.70321816279	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	43	1182	30.0	-29	False	NA	NA
PB.11832.4	chr9	-	1843	12	full-splice_match	SPOUT1	ENST00000361256.9	4286	12	27	2416	-15	24	multi-exon	FALSE	canonical	1	242922	junction_2	58495.59564970018	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	15	1145	30.0	-1	True	NA	NA
PB.9960.3	chr6	-	2479	9	full-splice_match	CPNE5	ENST00000493411.2	857	9	-22	-1600	-3	2	multi-exon	FALSE	canonical	1	26932	junction_7	34908.91765880711	NA	4	NA	TRUE	NA	NA	NA	C	coding	243	732	253	984	15.0	-4	True	AGTAAA	-21
PB.9960.2	chr6	-	2540	10	full-splice_match	CPNE5	ENST00000393189.2	2542	10	7	-5	-2	2	multi-exon	FALSE	canonical	1	85211	junction_9	19759.786783475047	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	140	1045	15.0	-3	True	AGTAAA	-21
PB.9960.1	chr6	-	2597	11	novel_not_in_catalog	CPNE5	novel	2558	11	NA	NA	2	2	any annotated donor/acceptor	FALSE	canonical	1	6008	junction_5	45634.89305301372	NA	4	NA	TRUE	NA	NA	NA	C	coding	114	345	125	469	15.0	12	True	AGTAAA	-21
PB.10423.1	chr7	-	2384	1	antisense	novelGene_ITGB8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9960.5	chr6	-	3439	22	novel_in_catalog	CPNE5	novel	2558	11	NA	NA	-51	-2	combination_of_known_junctions	FALSE	canonical	1	19982	junction_15	40446.294993409196	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	119	1951	30.0	4	True	AGTAAA	-14
PB.6039.1	chr19	+	2618	3	full-splice_match	ZNF576	ENST00000391965.6	1468	3	28	-1178	13	25	multi-exon	FALSE	canonical	1	17840	junction_1	111171.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	182	694	35.0	0	True	NA	NA
PB.9022.1	chr4	-	10129	57	novel_in_catalog	LRBA	novel	10032	57	NA	NA	0	77	combination_of_known_junctions	FALSE	canonical	1	133877	junction_53	67133.67672188573	NA	1	NA	TRUE	NA	NA	NA	B	coding	2852	8559	303	8861	65.0	-1	True	AATAAA	-13
PB.6039.3	chr19	+	1415	3	full-splice_match	ZNF576	ENST00000336564.4	2566	3	-3	1154	-3	-1	multi-exon	FALSE	canonical	1	203345	junction_1	18418.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	158	670	10.0	-15	True	ATTAAA	-15
PB.6039.2	chr19	+	2638	3	full-splice_match	ZNF576	ENST00000336564.4	2566	3	-28	-44	2	44	multi-exon	FALSE	canonical	1	203345	junction_1	18418.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	183	695	20.0	-40	True	NA	NA
PB.8814.2	chr4	+	2689	7	full-splice_match	DCK	ENST00000503359.5	2683	7	-9	3	-9	-3	multi-exon	FALSE	canonical	1	12949	junction_1	173218.68996677455	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	590	1156	20.0	-95	True	AATAAA	-28
PB.6912.9	chr2	+	2468	8	novel_not_in_catalog	NABP1	novel	855	3	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	16377	junction_4	180938.56665527474	NA	3	NA	TRUE	NA	NA	NA	C	coding	101	306	993	1298	20.0	4	True	AATAAA	-21
PB.6912.8	chr2	+	2281	6	novel_in_catalog	NABP1	novel	855	3	NA	NA	0	5	intron_retention	FALSE	canonical	1	112657	junction_1	153656.43059891768	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	1562	1867	55.0	0	True	ACTAAA	-13
PB.8814.3	chr4	+	1842	7	full-splice_match	DCK	ENST00000286648.9	2716	7	137	737	13	-737	multi-exon	FALSE	canonical	1	293800	junction_1	81821.03802133586	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	261	1043	40.0	-73	True	AATAAA	-12
PB.401.12	chr1	-	4414	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-44	-966	any annotated donor/acceptor	FALSE	canonical	1	28229	junction_16	160989.57882842654	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	142	2943	15.0	-37	False	AATAAA	-28
PB.11832.3	chr9	-	3805	13	novel_not_in_catalog	SPOUT1	novel	4286	12	NA	NA	6	-5	any annotated donor/acceptor	FALSE	canonical	1	3788	junction_1	106069.9310427638	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	36	1166	30.0	-22	True	NA	NA
PB.4896.8	chr17	+	1824	12	full-splice_match	ZNF207	ENST00000394670.8	13781	12	36	11921	-11	105	multi-exon	FALSE	canonical	1	763986	junction_5	382073.3821785055	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	134	1618	15.0	-4	True	AATAAA	-29
PB.4896.9	chr17	+	4142	14	novel_not_in_catalog	AC005899.4	novel	514	5	NA	NA	25677	19672	any annotated donor/acceptor	FALSE	canonical	1	37203	junction_11	622201.9941315696	NA	0	NA	TRUE	NA	NA	NA	B	coding	463	1392	132	1523	5.0	-2	True	ATTAAA	-15
PB.4896.6	chr17	+	4119	14	novel_not_in_catalog	AC005899.4	novel	514	5	NA	NA	25673	19672	any annotated donor/acceptor	FALSE	canonical	1	11361	junction_12	547071.6491770109	NA	1	NA	TRUE	NA	NA	NA	B	coding	493	1482	136	1617	5.0	-6	True	ATTAAA	-15
PB.4896.7	chr17	+	4201	15	novel_not_in_catalog	AC005899.4	novel	514	5	NA	NA	25674	19672	any annotated donor/acceptor	FALSE	canonical	1	20654	junction_12	584158.9377100338	NA	0	NA	TRUE	NA	NA	NA	B	coding	492	1479	135	1613	5.0	-5	True	ATTAAA	-15
PB.4896.4	chr17	+	1746	11	full-splice_match	ZNF207	ENST00000394673.6	2124	11	0	378	0	105	multi-exon	FALSE	canonical	1	400245	junction_8	465109.04421080655	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	149	1540	15.0	-137	False	AATAAA	-29
PB.4896.5	chr17	+	2266	11	full-splice_match	ZNF207	ENST00000321233.10	2283	11	13	4	7	-4	multi-exon	FALSE	canonical	1	132187	junction_5	503675.0216689428	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	142	1578	25.0	-12	True	AATAAA	-18
PB.4896.2	chr17	+	1997	10	incomplete-splice_match	ZNF207	ENST00000577908.5	4672	14	-51	12266	-3	257	3prime_fragment	FALSE	canonical	1	763986	junction_5	409614.3123033281	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	158	1336	95.0	-146	False	NA	NA
PB.4896.3	chr17	+	4178	14	novel_not_in_catalog	AC005899.4	novel	514	5	NA	NA	25652	19673	any annotated donor/acceptor	FALSE	canonical	1	53690	junction_12	541058.4493839381	NA	0	NA	TRUE	NA	NA	NA	B	coding	494	1485	157	1641	0.0	-145	False	ATTAAA	-16
PB.6912.7	chr2	+	2745	6	novel_in_catalog	NABP1	novel	855	3	NA	NA	0	5	intron_retention	FALSE	canonical	1	140656	junction_3	119415.16730901481	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	2026	2331	55.0	0	True	ACTAAA	-13
PB.4896.1	chr17	+	4762	14	novel_not_in_catalog	AC005899.4	novel	514	5	NA	NA	25648	20256	any annotated donor/acceptor	FALSE	canonical	1	52701	junction_13	546825.2805690932	NA	0	NA	TRUE	NA	NA	NA	B	coding	494	1485	161	1645	90.0	-149	False	NA	NA
PB.6937.13	chr2	+	2891	11	novel_in_catalog	BZW1	novel	578	6	NA	NA	5	608	no_combination_of_known_junctions	FALSE	canonical	1	68	junction_10	896099.7439463087	NA	7	NA	TRUE	NA	NA	NA	C	coding	378	1137	87	1223	15.0	5	True	AATAAA	-27
PB.7850.1	chr22	-	1712	1	antisense	novelGene_PNPLA3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-44	False	NA	NA
PB.8814.6	chr4	+	2212	7	full-splice_match	DCK	ENST00000286648.9	2716	7	354	150	155	-150	multi-exon	FALSE	canonical	1	293800	junction_1	81821.03802133586	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	44	826	45.0	-2	True	AATAAA	-19
PB.1058.11	chr1	-	2044	14	full-splice_match	RBBP5	ENST00000264515.10	4404	14	38	2322	-11	-2322	multi-exon	FALSE	canonical	1	104963	junction_1	52188.404912524486	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	105	1721	20.0	-3	True	NA	NA
PB.1058.10	chr1	-	2725	14	full-splice_match	RBBP5	ENST00000367164.1	4290	14	15	1550	15	-1550	multi-exon	FALSE	canonical	1	36728	junction_1	63058.95237749154	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	128	1630	25.0	2	True	TATAAA	-24
PB.6903.2	chr2	-	1721	14	full-splice_match	HIBCH	ENST00000359678.9	1939	14	217	1	62	0	multi-exon	FALSE	canonical	1	102946	junction_6	64463.51859718017	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	94	1239	25.0	-3	True	AATAAA	-21
PB.7840.4	chr22	-	2059	10	novel_not_in_catalog	CYB5R3	novel	2938	9	NA	NA	177	-8	any annotated donor/acceptor	FALSE	canonical	1	7750	junction_7	1148038.0374807564	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	575	1102	15.0	0	True	AGTAAA	-14
PB.7840.2	chr22	-	2142	8	novel_in_catalog	CYB5R3	novel	2938	9	NA	NA	196	-1	intron_retention	FALSE	canonical	1	1803763	junction_7	428987.8899146079	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	58	684	10.0	19	True	AGTAAA	-21
PB.7840.3	chr22	-	1877	9	full-splice_match	CYB5R3	ENST00000352397.9	2124	9	176	71	176	-4	multi-exon	FALSE	canonical	1	1803763	junction_8	416018.2394235971	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	78	983	15.0	-1	True	NA	NA
PB.7840.1	chr22	-	2907	9	full-splice_match	CYB5R3	ENST00000352397.9	2124	9	184	-967	184	-1	multi-exon	FALSE	canonical	1	1803763	junction_8	416018.2394235971	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	70	975	35.0	7	True	NA	NA
PB.7944.2	chr3	-	4904	2	incomplete-splice_match	RPL32	ENST00000452606.2	631	3	2	-3024	2	20	intron_retention	FALSE	canonical	1	12750812	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	2529	3017	20.0	4	True	AATAAA	-35
PB.8383.1	chr3	+	3077	17	novel_in_catalog	ACAD9	novel	553	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	210046	junction_1	64551.86858398131	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	97	1458	20.0	-24	True	AAGAAA	-15
PB.10228.10	chr6	-	5381	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-11	1	1	-1	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	243	2858	10.0	3	True	AATAAA	-16
PB.10228.13	chr6	-	4842	12	novel_in_catalog	BCLAF1	novel	7719	15	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	1	66665	junction_8	190867.98905851046	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	227	2323	20.0	19	True	AATAAA	-12
PB.10228.12	chr6	-	5010	13	full-splice_match	BCLAF1	ENST00000530767.5	4186	13	-63	-761	0	3	multi-exon	FALSE	canonical	1	66665	junction_9	189752.39831063765	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	247	2490	15.0	-1	True	AATAAA	-13
PB.10228.14	chr6	-	3466	8	novel_in_catalog	BCLAF1	novel	7719	15	NA	NA	-448	2	combination_of_known_junctions	FALSE	canonical	1	44449	junction_7	216019.21818189777	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	18	947	20.0	9178	False	AATAAA	-12
PB.2576.9	chr12	-	4073	9	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	-2	intron_retention	FALSE	canonical	1	363	junction_5	128937.63586711213	NA	0	NA	TRUE	NA	NA	NA	B	coding	189	570	2878	3447	30.0	12	True	ATTAAA	-35
PB.2576.8	chr12	-	4202	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	-1	intron_retention	FALSE	canonical	1	363	junction_5	115922.69685196294	NA	0	NA	TRUE	NA	NA	NA	B	coding	347	1044	62	1105	30.0	-1	True	ATTAAA	-36
PB.2576.7	chr12	-	3921	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	-15	4	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	126428.60867679678	NA	5	NA	TRUE	NA	NA	NA	B	coding	411	1236	77	1312	25.0	-16	True	ATTAAA	-41
PB.2576.6	chr12	-	2153	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	-5	-20	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	102797.21454937926	NA	0	NA	TRUE	NA	NA	NA	B	coding	492	1479	67	1545	55.0	-6	True	ATTAAA	-17
PB.2576.5	chr12	-	2077	9	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	-16	-6	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	122626.52779374454	NA	3	NA	TRUE	NA	NA	NA	B	coding	297	894	548	1441	20.0	-17	True	ATTAAA	-45
PB.2576.4	chr12	-	2049	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	-17	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	121764.4558755414	NA	0	NA	TRUE	NA	NA	NA	B	coding	458	1377	62	1438	50.0	-1	True	ATTAAA	-20
PB.2576.3	chr12	-	3661	13	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	363	junction_8	145112.31770109432	NA	0	NA	TRUE	NA	NA	NA	B	coding	245	738	353	1090	30.0	-3	True	AAGAAA	-40
PB.2576.2	chr12	-	2217	10	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	0	34	any annotated donor/acceptor	FALSE	canonical	1	363	junction_5	102797.21454937926	NA	0	NA	TRUE	NA	NA	NA	B	coding	492	1479	62	1540	10.0	-1	True	AATATA	-16
PB.2576.1	chr12	-	2421	12	novel_not_in_catalog	KANSL2	novel	1514	7	NA	NA	-2	119	any annotated donor/acceptor	TRUE	canonical	1	363	junction_7	128881.3938904954	NA	0	NA	TRUE	NA	NA	NA	B	coding	347	1044	37	1080	15.0	-1	True	AATAAA	-14
PB.11697.3	chr9	+	1603	6	full-splice_match	NIPSNAP3A	ENST00000374767.4	1633	6	34	-4	34	4	multi-exon	FALSE	canonical	1	321598	junction_1	87488.50149682528	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	72	815	10.0	-15	True	AATAAA	-20
PB.405.3	chr1	-	1706	1	full-splice_match	KTI12	ENST00000371614.1	1714	1	6	2	6	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	354	1065	50	1114	20.0	-27	True	AATAAA	-17
PB.6419.12	chr2	-	4505	2	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	16	4027	no_combination_of_known_junctions	FALSE	canonical	1	51261	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	114	345	768	1112	20.0	-21	True	NA	NA
PB.2946.18	chr12	-	8124	58	full-splice_match	GCN1	ENST00000300648.6	8675	58	-4	555	-4	-555	multi-exon	FALSE	canonical	1	197792	junction_57	149225.2526892624	NA	0	NA	TRUE	NA	NA	NA	C	coding	2671	8016	18	8033	30.0	-6	True	AATACA	-24
PB.8646.9	chr4	+	5093	11	full-splice_match	PCGF3	ENST00000362003.9	5685	11	44	548	-23	5	multi-exon	FALSE	canonical	1	159809	junction_1	123077.92259231546	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	352	1080	30.0	-99	False	AATAAA	-22
PB.3795.9	chr15	+	2152	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	302	no_combination_of_known_junctions	FALSE	canonical	1	82661	junction_8	294710.47034691315	NA	0	NA	TRUE	NA	NA	NA	B	coding	401	1206	88	1293	35.0	-12	True	AATAAA	-17
PB.3795.8	chr15	+	2296	11	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	55	intron_retention	FALSE	canonical	1	1996	junction_7	309747.46113802126	NA	1	NA	TRUE	NA	NA	NA	B	coding	282	849	88	936	40.0	-12	True	AATAAA	-18
PB.3795.7	chr15	+	2341	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	300	intron_retention	FALSE	canonical	1	252	junction_7	338597.2368529378	NA	2	NA	TRUE	NA	NA	NA	B	coding	268	807	88	894	25.0	-12	True	AATAAA	-15
PB.3795.6	chr15	+	2437	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	302	intron_retention	FALSE	canonical	1	1996	junction_7	333439.3119820483	NA	3	NA	TRUE	NA	NA	NA	B	coding	283	852	88	939	35.0	-12	True	AATAAA	-17
PB.3795.5	chr15	+	2548	11	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48858	304	intron_retention	FALSE	canonical	1	1996	junction_7	310409.4007878144	NA	1	NA	TRUE	NA	NA	NA	B	coding	283	852	88	939	35.0	-12	True	AATAAA	-19
PB.3795.4	chr15	+	2109	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48856	302	no_combination_of_known_junctions	FALSE	canonical	1	82661	junction_8	313597.267039222	NA	1	NA	TRUE	NA	NA	NA	B	coding	386	1161	90	1250	35.0	-14	True	AATAAA	-17
PB.3795.3	chr15	+	2226	11	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48856	302	no_combination_of_known_junctions	FALSE	canonical	1	305207	junction_3	245058.9435741736	NA	0	NA	TRUE	NA	NA	NA	B	coding	425	1278	90	1367	35.0	-14	True	AATAAA	-17
PB.3795.2	chr15	+	2838	7	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48856	-9059	intron_retention	FALSE	canonical	1	345996	junction_5	179629.2908637737	NA	13	NA	TRUE	NA	NA	NA	B	coding	170	513	90	602	85.0	-14	True	ATTAAA	-27
PB.3795.1	chr15	+	4017	10	novel_in_catalog	AC087721.2	novel	2114	13	NA	NA	48856	302	intron_retention	FALSE	canonical	1	345996	junction_5	210945.85607077496	NA	1	NA	TRUE	NA	NA	NA	B	coding	245	738	2421	3158	35.0	-14	True	AATAAA	-17
PB.11288.3	chr8	+	1246	4	full-splice_match	CTHRC1	ENST00000330295.9	1271	4	21	4	-14	-4	multi-exon	FALSE	canonical	1	285091	junction_1	97011.86430649718	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	122	853	40.0	-14	True	AATAAA	-20
PB.1224.3	chr1	+	2838	5	novel_in_catalog	EDARADD	novel	2803	6	NA	NA	7	-129	no_combination_of_known_junctions	FALSE	canonical	1	2300	junction_4	13840.376232241666	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	1295	2461	95.0	-18	True	NA	NA
PB.8853.48	chr4	-	4322	29	novel_not_in_catalog	SEC31A	novel	1564	8	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	380956.05951337644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1264	3795	117	3911	20.0	9369	False	ATTAAA	-12
PB.8853.49	chr4	-	4054	24	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	15006	junction_1	353043.7544945482	NA	4	NA	TRUE	NA	NA	NA	C	coding	1157	3474	170	3643	20.0	-1	True	ATTAAA	-12
PB.8853.44	chr4	-	3204	20	novel_not_in_catalog	SEC31A	novel	1564	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	388448.97872353496	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	129	2792	20.0	9363	False	ATTAAA	-13
PB.6396.11	chr2	+	2162	3	full-splice_match	YPEL5	ENST00000261353.8	2182	3	19	1	17	-1	multi-exon	FALSE	canonical	1	721018	junction_1	38249.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	108	473	20.0	11	True	AATAAA	-17
PB.12324.1	chrX	+	2235	2	full-splice_match	PNMA6A	ENST00000421798.4	2209	2	-26	0	-26	0	multi-exon	FALSE	canonical	1	63	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	399	1200	280	1479	5.0	NA	False	AATAAA	-17
PB.8853.40	chr4	-	3780	25	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	15006	junction_1	336703.5162233252	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	120	3368	20.0	9366	False	ATTAAA	-13
PB.8853.43	chr4	-	3155	18	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	664	junction_17	394095.643257628	NA	48	5	TRUE	NA	NA	NA	C	coding	848	2547	197	2743	20.0	-25	True	ATTAAA	-13
PB.823.8	chr1	-	2842	2	full-splice_match	GLMP	ENST00000497955.1	1002	2	-1145	-695	-4	-1	multi-exon	FALSE	canonical	1	716508	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	1247	1576	10.0	13	True	AATAGA	-19
PB.10054.10	chr6	+	6229	23	novel_in_catalog	FAM135A	novel	529	5	NA	NA	2	0	intron_retention	FALSE	canonical	1	26385	junction_15	28791.5245873871	NA	1	NA	TRUE	NA	NA	NA	C	coding	1541	4626	355	4980	25.0	60	True	AATAAA	-30
PB.6884.18	chr2	+	5698	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-15	14446	-15	-7	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	431	2812	50.0	-3	True	AATAAA	-11
PB.6333.5	chr2	-	4298	26	novel_in_catalog	WDR35	novel	6918	27	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	54182	junction_14	20018.91040791181	NA	1	NA	TRUE	NA	NA	NA	C	coding	1121	3366	143	3508	40.0	-54	True	AATAAA	-18
PB.6884.15	chr2	+	3623	22	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-15	-93	intron_retention	FALSE	canonical	1	3254	junction_9	210865.98038007645	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	431	1282	50.0	-3	True	NA	NA
PB.3777.2	chr15	+	4570	7	full-splice_match	BAHD1	ENST00000416165.5	4526	7	-60	16	-60	-2	multi-exon	FALSE	canonical	1	84901	junction_1	79218.08784562189	NA	41	2	TRUE	NA	NA	NA	C	coding	780	2343	132	2474	30.0	13	True	AATAAA	-21
PB.3777.1	chr15	+	4602	7	novel_in_catalog	BAHD1	novel	4698	7	NA	NA	-89	-1	combination_of_known_junctions	FALSE	canonical	1	48125	junction_2	87417.38860283399	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	161	2491	5.0	1	True	AATAAA	-36
PB.6884.16	chr2	+	3286	23	full-splice_match	DNAJC10	ENST00000616986.4	5783	23	216	2281	-15	-101	multi-exon	FALSE	canonical	1	52732	junction_10	198452.65488736864	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	431	2674	30.0	-3	True	AGTAAA	-19
PB.6884.11	chr2	+	2990	23	full-splice_match	DNAJC10	ENST00000616986.4	5783	23	226	2567	-5	-6	multi-exon	FALSE	canonical	1	52732	junction_10	198452.65488736864	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	421	2664	40.0	7	True	NA	NA
PB.6884.10	chr2	+	3816	24	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-12	-79	intron_retention	FALSE	canonical	1	74487	junction_11	193464.17468998328	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	428	1426	20.0	0	True	NA	NA
PB.6884.13	chr2	+	4051	23	full-splice_match	DNAJC10	ENST00000616986.4	5783	23	216	1516	-15	664	multi-exon	FALSE	canonical	1	52732	junction_10	198452.65488736864	NA	3	NA	TRUE	NA	NA	NA	C	coding	747	2244	431	2674	40.0	-3	True	ATTAAA	-19
PB.8646.2	chr4	+	1634	11	full-splice_match	PCGF3	ENST00000362003.9	5685	11	10	4041	-7	0	multi-exon	FALSE	canonical	1	159809	junction_1	123077.92259231546	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	386	1114	45.0	6	True	TATAAA	-17
PB.2840.11	chr12	+	2871	10	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	0	-5	intron_retention	FALSE	canonical	1	5191	junction_7	34281.38526235737	NA	2	1	TRUE	NA	NA	NA	C	coding	341	1026	87	1112	30.0	21	True	AATAAA	-18
PB.2840.10	chr12	+	3054	11	full-splice_match	PARPBP	ENST00000327680.6	3014	11	-41	1	0	-1	multi-exon	FALSE	canonical	1	51857	junction_9	23279.350013262825	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	87	1826	25.0	21	True	AATAAA	-22
PB.2840.13	chr12	+	1796	3	novel_not_in_catalog	PARPBP	novel	2452	12	NA	NA	43112	-1	intron_retention	FALSE	canonical	1	299	junction_1	15992.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-22
PB.2840.12	chr12	+	2658	8	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1517	junction_7	38437.40735167198	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	86	1099	25.0	22	True	AATAAA	-21
PB.6839.6	chr2	+	5425	26	novel_not_in_catalog	ITGA6	novel	970	7	NA	NA	113	-35	any annotated donor/acceptor	FALSE	canonical	1	45118	junction_20	147634.10024460338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	122	3298	30.0	-12	True	AATAAA	-18
PB.8646.1	chr4	+	2783	12	novel_not_in_catalog	PCGF3	novel	589	6	NA	NA	4	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	173003.39862629268	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	1643	2269	60.0	0	True	TATAAA	-11
PB.4769.9	chr17	-	3203	23	novel_in_catalog	MYH10	novel	7762	43	NA	NA	-166	-6557	combination_of_known_junctions	FALSE	canonical	1	35241	junction_22	125431.42466834448	NA	2	NA	TRUE	NA	NA	NA	C	coding	941	2823	380	3202	75.0	-1	True	AAGAAA	-16
PB.4769.8	chr17	-	2929	22	incomplete-splice_match	MYH10	ENST00000269243.8	7662	41	37	38271	-7	-6554	3prime_fragment	FALSE	canonical	1	205633	junction_17	96049.52951467762	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2826	103	2928	70.0	-4	True	AAGAAA	-19
PB.4769.7	chr17	-	6265	41	full-splice_match	MYH10	ENST00000269243.8	7662	41	37	1360	-7	-1360	multi-exon	FALSE	canonical	1	205633	junction_36	99397.77002307447	NA	0	NA	TRUE	NA	NA	NA	C	coding	1976	5931	103	6033	25.0	-4	True	ATTAAA	-16
PB.10337.1	chr6	+	4513	12	incomplete-splice_match	AFDN	ENST00000447894.6	5475	33	97930	-2087	-7539	-1	5prime_fragment	FALSE	canonical	1	197433	junction_10	88289.02717095363	NA	1	NA	TRUE	NA	NA	NA	B	coding	807	2424	3	2426	15.0	-9786	False	ATTAAA	-16
PB.4769.5	chr17	-	7585	42	novel_not_in_catalog	MYH10	novel	7762	43	NA	NA	730	-83	any annotated donor/acceptor	TRUE	canonical	1	1179	junction_41	124539.81288691737	NA	1	NA	TRUE	NA	NA	NA	C	coding	1976	5931	146	6076	10.0	1355	False	AATAAA	-17
PB.4769.4	chr17	-	7647	42	novel_in_catalog	MYH10	novel	7762	43	NA	NA	6	-83	combination_of_known_junctions	FALSE	canonical	1	35241	junction_41	122059.78487854736	NA	0	NA	TRUE	NA	NA	NA	C	coding	1976	5931	208	6138	10.0	2	True	AATAAA	-17
PB.4769.1	chr17	-	7723	41	full-splice_match	MYH10	ENST00000269243.8	7662	41	-146	85	-146	-85	multi-exon	FALSE	canonical	1	205633	junction_36	99397.77002307447	NA	0	NA	TRUE	NA	NA	NA	C	coding	1976	5931	286	6216	10.0	-6	True	AATAAA	-15
PB.1101.1	chr1	+	3685	12	full-splice_match	HHAT	ENST00000261458.7	3594	12	-90	-1	-43	1	multi-exon	FALSE	canonical	1	13581	junction_1	12562.823324567511	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	286	1767	35.0	-440	False	AATAAA	-23
PB.5413.8	chr18	-	3139	20	incomplete-splice_match	ROCK1	ENST00000635540.1	5656	34	-619	34478	212	-14472	3prime_fragment	FALSE	canonical	1	264009	junction_18	94874.23320573785	NA	1	NA	TRUE	NA	NA	NA	B	coding	803	2409	730	3138	60.0	-1	True	AATGAA	-44
PB.4859.1	chr17	+	3211	15	full-splice_match	NEK8	ENST00000268766.10	3581	15	-14	384	-14	-384	multi-exon	FALSE	canonical	1	25820	junction_5	18839.988770090677	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	49	2127	95.0	-9464	False	NA	NA
PB.4859.3	chr17	+	2885	15	full-splice_match	NEK8	ENST00000268766.10	3581	15	5	691	5	335	multi-exon	FALSE	canonical	1	25820	junction_5	18839.988770090677	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	30	2108	90.0	-5	True	NA	NA
PB.4859.2	chr17	+	2686	15	full-splice_match	NEK8	ENST00000268766.10	3581	15	-8	903	-8	123	multi-exon	FALSE	canonical	1	25820	junction_5	18839.988770090677	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	43	2121	95.0	-9458	False	NA	NA
PB.4859.5	chr17	+	2750	15	novel_in_catalog	NEK8	novel	643	4	NA	NA	-12	123	combination_of_known_junctions	FALSE	canonical	1	592	junction_5	22556.274534087912	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	23	2185	95.0	2	True	NA	NA
PB.4859.4	chr17	+	2546	15	full-splice_match	NEK8	ENST00000268766.10	3581	15	9	1026	9	0	multi-exon	FALSE	canonical	1	25820	junction_5	18839.988770090677	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	26	2104	70.0	-1	True	NA	NA
PB.4859.6	chr17	+	2821	14	novel_in_catalog	NEK8	novel	643	4	NA	NA	-7	123	intron_retention	FALSE	canonical	1	36001	junction_5	17400.51144966892	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	18	1400	95.0	7	True	NA	NA
PB.6927.1	chr2	+	2939	1	full-splice_match	MARS2	ENST00000282276.7	3019	1	81	-1	81	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	265	798	941	1738	20.0	81	False	ATTAAA	-18
PB.11923.2	chr9	+	4835	14	full-splice_match	NDOR1	ENST00000344894.10	1794	14	-97	-2944	-4	2351	multi-exon	FALSE	canonical	1	107550	junction_10	33676.42370610538	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	98	1891	20.0	-22	True	AATAAA	-14
PB.5401.18	chr18	-	4770	14	incomplete-splice_match	AFG3L2	ENST00000269143.7	3247	17	102	12327	102	-334	3prime_fragment	FALSE	canonical	1	167367	junction_11	119381.23327485293	NA	2	NA	TRUE	NA	NA	NA	C	coding	606	1821	131	1951	55.0	-4	True	NA	NA
PB.5682.8	chr19	+	2707	7	novel_in_catalog	ZNF559	novel	2991	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	36198	junction_6	18500.425605464683	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	1009	1932	35.0	18	True	AATAAA	-18
PB.5682.9	chr19	+	3285	6	full-splice_match	ZNF559	ENST00000592298.5	588	6	1	-2698	1	0	multi-exon	FALSE	canonical	1	24745	junction_1	23107.63193752229	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	1587	2510	35.0	48	False	AATAAA	-18
PB.2689.1	chr12	-	1464	13	full-splice_match	PRIM1	ENST00000338193.10	1393	13	-35	-36	3	10	multi-exon	FALSE	canonical	1	100033	junction_7	109622.38569070112	NA	0	NA	TRUE	NA	NA	NA	A	coding	420	1263	73	1335	50.0	3	True	AGTAAA	-12
PB.5682.4	chr19	+	3157	6	full-splice_match	ZNF559	ENST00000592504.5	1398	6	0	-1759	0	0	multi-exon	FALSE	canonical	1	45786	junction_3	16821.66193216354	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	1459	2382	35.0	0	True	AATAAA	-18
PB.5682.5	chr19	+	2881	7	full-splice_match	ZNF559	ENST00000592896.5	1488	7	-15	-1378	3	0	multi-exon	FALSE	canonical	1	16205	junction_3	24428.472504208872	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	1183	2106	35.0	3	True	AATAAA	-18
PB.5682.6	chr19	+	2567	6	full-splice_match	ZNF559	ENST00000587557.5	2991	6	422	2	-3	-2	multi-exon	FALSE	canonical	1	14612	junction_2	26395.250580360098	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	178	1794	25.0	15	True	AATAAA	-16
PB.5682.7	chr19	+	2723	8	novel_not_in_catalog	ZNF559	novel	2991	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	238	junction_2	31271.074155140985	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	333	1949	30.0	18	True	AATAAA	-17
PB.5401.15	chr18	-	2954	17	novel_not_in_catalog	AFG3L2	novel	3247	17	NA	NA	60	-176	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	169322.5349425155	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	173	2509	40.0	35	False	ATTAAA	-14
PB.5682.1	chr19	+	2455	4	novel_in_catalog	ZNF559	novel	2991	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	8025	junction_2	21881.651770883804	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	757	1680	35.0	-9	True	AATAAA	-18
PB.5682.2	chr19	+	2812	7	novel_in_catalog	ZNF559	novel	2991	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	16205	junction_3	23973.625102507034	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	337	2037	35.0	-6	True	AATAAA	-18
PB.5682.3	chr19	+	2653	7	full-splice_match	ZNF559	ENST00000603380.5	3054	7	401	0	-6	0	multi-exon	FALSE	canonical	1	40208	junction_6	17710.454251812844	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	262	1878	35.0	-6	True	AATAAA	-18
PB.372.2	chr1	+	1993	8	full-splice_match	TOE1	ENST00000372090.5	2389	8	358	38	-24	-27	multi-exon	FALSE	canonical	1	128636	junction_6	42602.86239497175	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	226	1758	80.0	-9	True	NA	NA
PB.372.3	chr1	+	1789	8	novel_in_catalog	TOE1	novel	2389	8	NA	NA	249	-27	combination_of_known_junctions	FALSE	canonical	1	16655	junction_1	73818.77588958474	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	160	1554	80.0	227	False	NA	NA
PB.8833.2	chr4	-	2230	11	novel_in_catalog	NUP54	novel	1671	4	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	10536	junction_5	153693.7382923911	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	57	968	15.0	3	True	AATAAA	-27
PB.8402.10	chr3	-	1400	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	-2	308	-2	34	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	151	1197	25.0	-1	True	ATTAAA	-44
PB.7049.7	chr2	+	1986	10	novel_in_catalog	MFF	novel	581	4	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	102983	junction_6	176407.89794411624	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	318	1268	20.0	-5	True	AATAAA	-18
PB.11853.4	chr9	+	4248	20	novel_not_in_catalog	FUBP3	novel	2228	2	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	6790	junction_3	232001.33454816035	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	413	1696	0.0	24	True	AATAAA	-31
PB.11853.2	chr9	+	3054	18	novel_in_catalog	FUBP3	novel	2228	2	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	89351	junction_16	155170.27546622124	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	78	1724	0.0	21	True	AATAAA	-31
PB.3636.2	chr14	+	4597	6	full-splice_match	OTUB2	ENST00000203664.9	3922	6	13	-688	13	688	multi-exon	FALSE	canonical	1	15151	junction_1	10566.287419902981	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	197	901	30.0	1	True	NA	NA
PB.3636.1	chr14	+	3927	6	full-splice_match	OTUB2	ENST00000203664.9	3922	6	-7	2	-7	-2	multi-exon	FALSE	canonical	1	15151	junction_1	10566.287419902981	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	217	921	15.0	-157	False	ATTAAA	-12
PB.7049.6	chr2	+	3522	6	full-splice_match	MFF	ENST00000460756.5	3524	6	-4	6	0	-4	multi-exon	FALSE	canonical	1	191014	junction_4	144176.39107509938	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	2156	2812	30.0	-7	True	AATAAA	-10
PB.10062.1	chr6	-	4597	1	genic	EEF1A1	novel	NA	NA	NA	NA	100	1029	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	114	345	69	413	100.0	7604	False	NA	NA
PB.10062.2	chr6	-	3531	8	full-splice_match	EEF1A1	ENST00000309268.10	2303	8	535	-1763	-21	0	multi-exon	FALSE	canonical	1	17797	junction_4	6356073.130477156	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	85	1473	30.0	-29	True	AATAAA	-16
PB.7838.3	chr22	-	2341	7	full-splice_match	RRP7BP	ENST00000458605.5	2332	7	-27	18	0	-18	multi-exon	FALSE	canonical	1	2639	junction_2	84954.20068827282	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	559	870	90.0	-28	True	NA	NA
PB.7838.2	chr22	-	2249	8	full-splice_match	RRP7BP	ENST00000357802.6	2375	8	8	118	8	-118	multi-exon	FALSE	canonical	1	2639	junction_3	85283.21326005009	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	551	862	25.0	-20	True	AATACA	-21
PB.7838.1	chr22	-	2368	8	full-splice_match	RRP7BP	ENST00000357802.6	2375	8	1	6	1	-6	multi-exon	FALSE	canonical	1	2639	junction_3	85283.21326005009	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	558	869	40.0	-27	True	AATAAA	-7
PB.10062.6	chr6	-	3516	1	novel_in_catalog	EEF1A1	novel	3508	10	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	203	612	1517	2128	10.0	-8	True	ATTAAA	-15
PB.10062.9	chr6	-	2381	8	novel_not_in_catalog	EEF1A1	novel	4441	7	NA	NA	1	1	intron_retention	FALSE	canonical	1	17797	junction_4	6372219.984534657	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	701	2089	15.0	-7	True	ATTAAA	-14
PB.6903.4	chr2	-	1422	15	novel_in_catalog	HIBCH	novel	396	2	NA	NA	61	-3	combination_of_known_junctions	FALSE	canonical	1	17576	junction_1	77021.0595108141	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	95	1240	20.0	-4	True	AATAAA	-18
PB.8833.9	chr4	-	2416	6	novel_in_catalog	NUP54	novel	1938	10	NA	NA	4	1250	intron_retention	FALSE	canonical	1	261041	junction_3	61814.98714907251	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	57	1052	85.0	3	True	TTTAAA	-35
PB.5524.2	chr18	+	2315	12	full-splice_match	CNDP2	ENST00000579847.5	2653	12	31	307	19	-280	multi-exon	TRUE	canonical	1	183042	junction_1	293851.295245916	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	132	1559	50.0	-39	True	NA	NA
PB.1049.1	chr1	+	4972	21	full-splice_match	ATP2B4	ENST00000357681.9	8968	21	233	3763	7	-1	multi-exon	FALSE	canonical	1	293508	junction_1	77503.12527304947	NA	1	NA	TRUE	NA	NA	NA	C	coding	1205	3618	891	4508	15.0	-1	True	TATAAA	-17
PB.1906.2	chr11	+	6748	10	novel_in_catalog	ALKBH3	novel	1371	10	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	6697	junction_7	91286.18712043818	NA	9	NA	TRUE	NA	NA	NA	C	coding	164	495	414	908	20.0	6	True	ATTAAA	-9
PB.1906.1	chr11	+	1540	10	full-splice_match	ALKBH3	ENST00000302708.8	1474	10	-5	-61	3	7	multi-exon	FALSE	canonical	1	164763	junction_6	50808.239225640136	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	417	1277	25.0	3	True	ATTAAA	-23
PB.11646.57	chr9	-	2591	20	incomplete-splice_match	IARS	ENST00000443024.6	4341	35	-40	46012	-18	0	3prime_fragment	FALSE	canonical	1	444149	junction_19	251106.35790203616	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	132	2339	80.0	-1	True	NA	NA
PB.11646.50	chr9	-	6492	34	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_30	425755.97027892695	NA	3	1	TRUE	NA	NA	NA	C	coding	720	2163	95	2257	45.0	-3	True	AATAAA	-11
PB.635.19	chr1	-	3701	20	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	2	-20	combination_of_known_junctions	FALSE	canonical	1	12576	junction_19	1730657.8768954177	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	561	2864	90.0	-3	True	NA	NA
PB.11460.10	chr9	-	4293	12	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-18	-4722	any annotated donor/acceptor	FALSE	canonical	1	7670	junction_9	60928.71527645786	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	1006	1341	35.0	53	True	AGTAAA	-18
PB.11646.51	chr9	-	4223	33	novel_in_catalog	IARS	novel	4656	34	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	952	junction_32	354736.57577837224	NA	0	NA	TRUE	NA	NA	NA	C	coding	1152	3459	305	3763	45.0	-9	True	AATAAA	-10
PB.635.16	chr1	-	3575	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	1555432.5296056543	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	447	2702	25.0	-1	True	NA	NA
PB.9707.15	chr6	+	3938	19	novel_not_in_catalog	PRPF4B	novel	6775	16	NA	NA	88	0	intron_retention	FALSE	non_canonical	0	0	junction_16	162170.13054094353	NA	1	NA	TRUE	NA	NA	NA	C	coding	1007	3024	13	3036	10.0	-1	True	AATAAA	-18
PB.11646.52	chr9	-	3685	29	novel_in_catalog	IARS	novel	4656	34	NA	NA	0	-12	intron_retention	FALSE	canonical	0	0	junction_5	372372.2521827562	NA	1	1	TRUE	NA	NA	NA	C	coding	1047	3144	92	3235	50.0	0	True	AGTAAA	-13
PB.11436.5	chr9	-	1622	5	full-splice_match	AK3	ENST00000381809.7	2736	5	197	917	106	-27	multi-exon	FALSE	canonical	1	181431	junction_1	170231.89422520093	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	35	718	80.0	139	False	GATAAA	-30
PB.11436.4	chr9	-	2395	5	full-splice_match	AK3	ENST00000381809.7	2736	5	216	125	125	-125	multi-exon	FALSE	canonical	1	181431	junction_1	170231.89422520093	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	16	699	20.0	-5	True	AATAAA	-13
PB.11436.6	chr9	-	3541	6	novel_not_in_catalog	AK3	novel	4029	5	NA	NA	25	-31	any annotated donor/acceptor	FALSE	canonical	1	12196	junction_5	220882.6978424521	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	2168	2641	60.0	-1	True	GATAAA	-26
PB.11436.1	chr9	-	1869	6	novel_not_in_catalog	AK3	novel	4029	5	NA	NA	28	-281	any annotated donor/acceptor	FALSE	canonical	1	79885	junction_1	189966.71081913274	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	113	796	85.0	2	True	NA	NA
PB.635.14	chr1	-	3202	18	full-splice_match	CSDE1	ENST00000261443.9	3228	18	-11	37	2	-20	multi-exon	FALSE	canonical	1	94441	junction_17	1585338.5915023573	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	62	2365	90.0	-3	True	NA	NA
PB.11436.3	chr9	-	2490	4	full-splice_match	AK3	ENST00000447596.4	705	4	33	-1818	33	-2	multi-exon	FALSE	canonical	1	10519	junction_3	102977.34172460788	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	108	671	20.0	7	True	AATAAA	-17
PB.11436.2	chr9	-	2618	5	full-splice_match	AK3	ENST00000381809.7	2736	5	117	1	26	-1	multi-exon	FALSE	canonical	1	181431	junction_1	170231.89422520093	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	115	798	20.0	0	True	AATAAA	-18
PB.708.1	chr1	-	6408	1	full-splice_match	HIST2H2BC	ENST00000564237.2	6440	1	34	-2	34	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	113	342	5231	5572	40.0	-602	False	AATAAA	-32
PB.708.2	chr1	-	2809	1	full-splice_match	HIST2H2BC	ENST00000498492.2	580	1	-118	-2111	47	2111	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	193	582	118	699	40.0	-589	False	AATAAA	-9
PB.11460.14	chr9	-	3828	7	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-69	18876	intron_retention	FALSE	canonical	1	27149	junction_4	37048.161348889276	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	3066	3650	100.0	2	True	NA	NA
PB.11538.4	chr9	+	2305	16	novel_in_catalog	MELK	novel	2485	18	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	20148	junction_9	114904.51549421372	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	196	1965	20.0	-33	True	AATAAA	-12
PB.635.13	chr1	-	3403	18	full-splice_match	CSDE1	ENST00000530886.5	3459	18	29	27	5	-20	multi-exon	FALSE	canonical	1	57674	junction_16	1591977.2325184774	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	560	2566	90.0	-16	True	NA	NA
PB.4187.1	chr16	+	8747	14	novel_in_catalog	SRRM2	novel	9353	15	NA	NA	-5	-3	intron_retention	TRUE	canonical	1	96908	junction_1	663975.082677704	NA	35	1	TRUE	NA	NA	NA	B	coding	2656	7971	237	8207	25.0	-21	True	AATAAA	-13
PB.4187.4	chr16	+	6225	4	novel_in_catalog	SRRM2	novel	9353	15	NA	NA	306	0	intron_retention	FALSE	canonical	1	1634820	junction_1	502980.0538198972	NA	0	NA	TRUE	NA	NA	NA	B	coding	1436	4311	71	4381	20.0	-6925	False	AATAAA	-16
PB.1457.2	chr10	-	6680	13	novel_in_catalog	PSAP	novel	2872	14	NA	NA	18	-2	intron_retention	FALSE	canonical	1	4769161	junction_12	2095927.69750474	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	4794	5540	20.0	9086	False	AATAAA	-13
PB.635.11	chr1	-	3585	19	full-splice_match	CSDE1	ENST00000339438.10	4006	19	2	419	1	-20	multi-exon	FALSE	canonical	1	1441617	junction_1	1263348.642629662	NA	9	1	TRUE	NA	NA	NA	C	coding	767	2304	445	2748	90.0	1	True	NA	NA
PB.247.2	chr1	+	2134	9	full-splice_match	KHDRBS1	ENST00000327300.11	2757	9	23	600	23	-595	multi-exon	FALSE	canonical	1	1330178	junction_1	226516.00656131207	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	145	1476	85.0	-18	True	ATTAAA	-33
PB.6940.8	chr2	-	2867	19	novel_not_in_catalog	ORC2	novel	4312	18	NA	NA	-3	-27	any annotated donor/acceptor	FALSE	canonical	1	4886	junction_13	77288.1918005151	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	254	2047	25.0	17	False	AATAAA	-19
PB.6940.9	chr2	-	2677	17	novel_in_catalog	ORC2	novel	4312	18	NA	NA	23	-27	combination_of_known_junctions	FALSE	canonical	1	1660	junction_15	63637.58686290968	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	199	1857	25.0	2	True	AATAAA	-19
PB.303.3	chr1	-	2366	17	full-splice_match	SF3A3	ENST00000373019.4	3673	17	879	428	33	-428	multi-exon	FALSE	canonical	1	226807	junction_2	182529.00217824974	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	78	1583	65.0	-21	True	NA	NA
PB.10088.1	chr6	-	3860	8	novel_in_catalog	TBX18	novel	1230	9	NA	NA	-42	-1827	combination_of_known_junctions	FALSE	canonical	1	7657	junction_7	15949.300216240057	NA	1	NA	TRUE	NA	NA	NA	A	coding	449	1350	255	1604	30.0	1099	False	ATTAAA	-30
PB.5112.1	chr17	-	5738	3	novel_not_in_catalog	AC021491.2	novel	607	3	NA	NA	-3362	2004	intron_retention	FALSE	canonical	1	4310	junction_1	36.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	159	480	865	1344	20.0	-2076	False	NA	NA
PB.9019.6	chr4	-	2805	12	novel_not_in_catalog	PRMT9	novel	3528	12	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	canonical	1	11187	junction_8	33546.36083353236	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	1037	2659	50.0	-9	True	AATAAA	-19
PB.6940.1	chr2	-	3675	19	novel_not_in_catalog	ORC2	novel	4312	18	NA	NA	-20	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	63059.51237015007	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	271	2004	20.0	0	True	AATAAA	-31
PB.9019.4	chr4	-	2809	11	full-splice_match	PRMT9	ENST00000514886.1	2674	11	-112	-23	-7	23	multi-exon	FALSE	canonical	1	8366	junction_10	33103.69471841474	NA	9	NA	TRUE	NA	NA	NA	C	coding	732	2199	441	2639	35.0	-103	False	AATAAA	-43
PB.9019.5	chr4	-	2651	11	novel_not_in_catalog	PRMT9	novel	3528	12	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	8366	junction_10	40564.66147387403	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	882	2504	50.0	-3	True	AATAAA	-20
PB.9019.2	chr4	-	3458	12	full-splice_match	PRMT9	ENST00000322396.6	3528	12	70	0	-35	0	multi-exon	FALSE	canonical	1	52634	junction_11	24724.288221293384	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	174	2711	15.0	-26	True	AATAAA	-25
PB.9019.3	chr4	-	2860	12	full-splice_match	PRMT9	ENST00000322396.6	3528	12	64	604	-41	-4	multi-exon	FALSE	canonical	1	52634	junction_11	24724.288221293384	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	180	2717	45.0	-32	True	AATAAA	-16
PB.8637.11	chr3	+	2931	9	full-splice_match	FYTTD1	ENST00000424384.2	1758	9	385	-1558	385	1558	multi-exon	FALSE	canonical	1	10279	junction_1	196873.60707630258	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	147	902	35.0	25	False	ATTAAA	-27
PB.9019.1	chr4	-	5605	12	full-splice_match	PRMT9	ENST00000322396.6	3528	12	56	-2133	-49	2133	multi-exon	FALSE	canonical	1	52634	junction_11	24724.288221293384	NA	3	NA	TRUE	NA	NA	NA	C	coding	845	2538	188	2725	30.0	-40	False	AATAAA	-21
PB.6317.1	chr2	+	5412	17	novel_not_in_catalog	GREB1	novel	8484	33	NA	NA	-18	1	any annotated donor/acceptor	FALSE	canonical	1	712	junction_3	51232.368538135575	NA	6	NA	TRUE	NA	NA	NA	C	coding	833	2502	578	3079	15.0	0	True	AATAAA	-16
PB.736.1	chr1	+	2528	1	genic	C1orf56	novel	NA	NA	NA	NA	-11	543	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	339	1020	120	1139	0.0	-22	True	AATAAA	-20
PB.10313.6	chr6	+	2096	8	full-splice_match	WTAP	ENST00000621533.4	2109	8	13	0	13	0	multi-exon	FALSE	canonical	1	40725	junction_5	175825.7849003858	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	200	1390	15.0	7	True	AATAAA	-21
PB.10313.7	chr6	+	4333	6	full-splice_match	WTAP	ENST00000337387.4	1622	6	-64	-2647	-6	2641	multi-exon	FALSE	canonical	1	40725	junction_5	192801.6748344267	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	189	644	80.0	18	True	NA	NA
PB.10313.4	chr6	+	1750	6	full-splice_match	WTAP	ENST00000337387.4	1622	6	-127	-1	-39	0	multi-exon	FALSE	canonical	1	40725	junction_5	192801.6748344267	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	252	707	20.0	-8798	False	ATTAAA	-15
PB.10313.5	chr6	+	3455	6	full-splice_match	WTAP	ENST00000337387.4	1622	6	-83	-1750	5	1744	multi-exon	FALSE	canonical	1	40725	junction_5	192801.6748344267	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	208	663	30.0	-1	True	ATTAAA	-14
PB.10313.2	chr6	+	1752	6	incomplete-splice_match	WTAP	ENST00000614346.4	1623	7	91	0	91	0	intron_retention	FALSE	canonical	1	40725	junction_5	195389.62847254713	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	254	709	20.0	-38	True	ATTAAA	-15
PB.10284.1	chr6	-	3134	3	novel_not_in_catalog	ZBTB2	novel	3090	3	NA	NA	497	1	any annotated donor/acceptor	FALSE	canonical	1	4737	junction_2	75726.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	185	1729	25.0	796	False	AATAAA	-18
PB.10313.1	chr6	+	2131	8	full-splice_match	WTAP	ENST00000358372.8	3656	8	1524	1	111	1	multi-exon	FALSE	canonical	1	40725	junction_5	179213.047761368	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	234	1424	10.0	-18	True	AATAAA	-22
PB.2211.5	chr11	+	3597	14	novel_in_catalog	TMEM135	novel	3938	14	NA	NA	-1	-232	no_combination_of_known_junctions	FALSE	canonical	1	5106	junction_1	45023.588578490795	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	280	1404	35.0	34	True	AATAAA	-23
PB.2211.4	chr11	+	3665	14	novel_in_catalog	TMEM135	novel	3938	14	NA	NA	14	-232	combination_of_known_junctions	FALSE	canonical	1	3741	junction_2	45341.473077006434	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	189	1472	35.0	1	True	AATAAA	-23
PB.2211.7	chr11	+	3154	14	full-splice_match	TMEM135	ENST00000340353.11	3938	14	179	605	16	-605	multi-exon	FALSE	canonical	1	19848	junction_4	41386.59941455194	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	24	1334	25.0	-10	True	ATTAAA	-28
PB.2211.6	chr11	+	3064	14	novel_not_in_catalog	TMEM135	novel	3938	14	NA	NA	-9	617	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	46211.10190952286	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	135	1430	30.0	-162	False	AATAAA	-31
PB.2211.1	chr11	+	3594	15	full-splice_match	TMEM135	ENST00000305494.5	2433	15	15	-1176	15	-232	multi-exon	FALSE	canonical	1	119635	junction_8	21785.770534353614	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	25	1401	35.0	-11	True	AATAAA	-23
PB.2211.3	chr11	+	3540	14	full-splice_match	TMEM135	ENST00000340353.11	3938	14	166	232	3	-232	multi-exon	FALSE	canonical	1	19848	junction_4	41386.59941455194	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	37	1347	35.0	-23	True	AATAAA	-23
PB.2211.2	chr11	+	3228	15	full-splice_match	TMEM135	ENST00000305494.5	2433	15	2	-797	2	-611	multi-exon	FALSE	canonical	1	119635	junction_8	21785.770534353614	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	38	1414	40.0	-24	True	ATTAAA	-22
PB.2211.9	chr11	+	3017	14	novel_in_catalog	TMEM135	novel	3938	14	NA	NA	-3	617	combination_of_known_junctions	FALSE	canonical	1	3741	junction_2	45341.473077006434	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	100	1383	30.0	13	True	AATAAA	-31
PB.2211.8	chr11	+	3638	14	novel_not_in_catalog	TMEM135	novel	3938	14	NA	NA	-9	-231	any annotated donor/acceptor	FALSE	canonical	1	15	junction_3	46163.51164626444	NA	3	NA	TRUE	NA	NA	NA	C	coding	239	720	725	1444	30.0	7	True	AATAAA	-24
PB.10284.6	chr6	-	3116	4	novel_not_in_catalog	ZBTB2	novel	3090	3	NA	NA	-125	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	64240.72683793877	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	170	1714	30.0	0	True	AATAAA	-15
PB.5187.10	chr17	-	4365	9	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_8	523553.98384632636	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	171	1157	40.0	-1	True	AATAAA	-45
PB.5187.11	chr17	-	4150	10	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_9	526272.8951488201	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	171	1157	40.0	-1	True	AATAAA	-45
PB.5187.12	chr17	-	4048	10	novel_in_catalog	DDX5	novel	2225	12	NA	NA	-25	0	intron_retention	FALSE	canonical	1	5032484	junction_9	685192.2438628465	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	230	1333	40.0	554	False	AATAAA	-45
PB.9483.25	chr5	+	2026	11	incomplete-splice_match	MATR3	ENST00000510056.5	3040	14	-10	7269	1	-199	3prime_fragment	FALSE	canonical	1	147046	junction_9	674768.3125968868	NA	3	NA	TRUE	NA	NA	NA	C	coding	587	1761	264	2024	50.0	7	True	NA	NA
PB.5187.14	chr17	-	3897	12	novel_in_catalog	DDX5	novel	2225	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	84100	junction_11	1902762.5310009369	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	294	1514	40.0	-2	True	AATAAA	-45
PB.5187.15	chr17	-	3866	10	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_9	705152.4245421372	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	171	1343	40.0	-1	True	AATAAA	-45
PB.2223.8	chr11	+	2459	10	novel_not_in_catalog	C11orf54	novel	4094	8	NA	NA	2	-6	any annotated donor/acceptor	FALSE	canonical	1	6884	junction_2	124230.37173416924	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	903	1850	80.0	-15	True	ATTAAA	-10
PB.5187.17	chr17	-	3855	10	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_9	717004.6328967012	NA	6	NA	TRUE	NA	NA	NA	C	coding	218	657	171	827	40.0	-1	True	AATAAA	-45
PB.5187.18	chr17	-	3684	13	novel_in_catalog	DDX5	novel	2225	12	NA	NA	-10	0	intron_retention	FALSE	canonical	1	84100	junction_12	1885218.7200622163	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	303	1523	40.0	-11	True	AATAAA	-45
PB.2223.7	chr11	+	2504	9	full-splice_match	C11orf54	ENST00000354421.7	1733	9	-4	-767	-4	0	multi-exon	FALSE	canonical	1	165130	junction_1	57398.08862331023	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	162	1109	30.0	-22	True	AATAAA	-15
PB.2223.4	chr11	+	2358	8	full-splice_match	C11orf54	ENST00000540113.5	2442	8	64	20	1	-1	multi-exon	FALSE	canonical	1	10027	junction_1	108845.27970397583	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	74	964	30.0	-29	True	AATAAA	-14
PB.2223.5	chr11	+	2052	9	full-splice_match	C11orf54	ENST00000354421.7	1733	9	-11	-308	1	308	multi-exon	FALSE	canonical	1	165130	junction_1	57398.08862331023	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	169	1116	80.0	-29	True	TTTAAA	-10
PB.2223.2	chr11	+	1734	2	novel_not_in_catalog	C11orf54	novel	4094	8	NA	NA	22	-9119	any annotated donor/acceptor	FALSE	canonical	1	15303	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	5	True	NA	NA
PB.2223.3	chr11	+	3268	10	novel_not_in_catalog	C11orf54	novel	4094	8	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	1	6884	junction_2	124230.37173416924	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	929	1876	30.0	-41	True	AATAAA	-12
PB.9483.28	chr5	+	4351	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	1	2	intron_retention	FALSE	canonical	1	147046	junction_9	1026399.9382786719	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	264	2645	20.0	7	True	NA	NA
PB.2223.1	chr11	+	1773	9	full-splice_match	C11orf54	ENST00000331239.8	2522	9	-39	788	9	-8	multi-exon	FALSE	canonical	1	32052	junction_1	95370.12373830378	NA	6	NA	TRUE	NA	NA	NA	C	coding	315	948	219	1166	75.0	-8	True	ATTAAA	-8
PB.11008.14	chr8	-	2739	1	novel_in_catalog	LZTS1	novel	5706	4	NA	NA	-23707	-26366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-5465	False	NA	NA
PB.11538.3	chr9	+	2853	20	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	138541.46190002517	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	1197	2510	10.0	-33	True	AATAAA	-15
PB.4197.2	chr16	+	836	7	full-splice_match	IL32	ENST00000525643.6	1272	7	258	178	1	-1	multi-exon	FALSE	canonical	1	967431	junction_1	588966.7245178203	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	75	641	10.0	2	True	AATAAA	-37
PB.4197.1	chr16	+	764	6	full-splice_match	IL32	ENST00000008180.13	1056	6	7	285	-1	2	multi-exon	FALSE	canonical	1	383979	junction_3	924227.167113021	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	79	585	30.0	-2	True	AATAAA	-21
PB.4617.11	chr16	+	4170	16	novel_in_catalog	SPG7	novel	3330	17	NA	NA	1	0	intron_retention	FALSE	canonical	1	292269	junction_3	124666.95519955916	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	2226	3497	15.0	0	True	AATAAA	-21
PB.4617.10	chr16	+	4596	17	full-splice_match	SPG7	ENST00000644225.1	4581	17	3	-18	1	-1	multi-exon	FALSE	canonical	1	64868	junction_16	150114.5026818981	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	15	2342	20.0	0	True	AATAAA	-20
PB.1932.16	chr11	-	3756	15	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-36	-2	intron_retention	FALSE	canonical	1	18737	junction_14	224101.4404474738	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	316	1857	85.0	5	True	AATAAA	-4
PB.4617.12	chr16	+	2199	11	incomplete-splice_match	SPG7	ENST00000643496.1	2859	14	6869	-17	5	2	5prime_fragment	FALSE	canonical	1	309285	junction_3	124637.89222784538	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	14	1528	15.0	1102	False	AATAAA	-19
PB.1932.11	chr11	-	1932	1	incomplete-splice_match	CELF1	ENST00000310513.10	4583	14	84605	648	3844	-637	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	109	330	1460	1789	85.0	268	False	NA	NA
PB.1932.12	chr11	-	2153	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-26	-11	combination_of_known_junctions	FALSE	canonical	1	149556	junction_1	189945.95014013606	NA	2	1	TRUE	NA	NA	NA	C	coding	487	1464	163	1626	30.0	-14	True	AATAAA	-11
PB.1932.13	chr11	-	3809	18	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-23	-2	intron_retention	FALSE	canonical	1	2459	junction_16	252059.94305941236	NA	2	1	TRUE	NA	NA	NA	C	coding	514	1545	454	1998	85.0	-11	True	AATAAA	-4
PB.1932.18	chr11	-	3678	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-30	-2	intron_retention	FALSE	canonical	1	12095	junction_13	210917.34957948135	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	238	1779	85.0	11	False	AATAAA	-4
PB.1932.19	chr11	-	3658	16	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-26	-2	intron_retention	FALSE	canonical	1	18737	junction_15	229350.39682343404	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	306	1847	85.0	-14	True	AATAAA	-4
PB.11008.11	chr8	-	4961	5	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	27	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	17373.338170527273	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	332	2122	20.0	5	True	AATAAA	-20
PB.8524.8	chr3	+	3866	25	full-splice_match	ECT2	ENST00000392692.7	4158	25	1	291	1	-290	multi-exon	FALSE	canonical	1	110454	junction_4	100965.64083554165	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	176	2920	20.0	-299	False	ATTAAA	-18
PB.8524.9	chr3	+	3673	24	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-7	-289	combination_of_known_junctions	FALSE	canonical	1	15092	junction_11	107650.3673862786	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	162	2726	20.0	-7	True	ATTAAA	-19
PB.2318.1	chr11	-	1920	9	full-splice_match	DPAGT1	ENST00000354202.8	2205	9	288	-3	-1	-1	multi-exon	FALSE	canonical	1	362119	junction_8	52598.29911401604	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	200	1426	30.0	-2	True	AATAAA	-24
PB.7896.1	chr22	-	2634	20	full-splice_match	CPT1B	ENST00000312108.11	2592	20	-41	-1	-3	0	multi-exon	FALSE	canonical	1	15236	junction_19	106746.93873202772	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	93	2411	5.0	4540	False	AATAAA	-21
PB.2318.3	chr11	-	2465	7	incomplete-splice_match	DPAGT1	ENST00000392834.7	1817	8	2	1	2	0	intron_retention	FALSE	canonical	1	423335	junction_5	35354.65575972829	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	1073	1978	25.0	-2	True	AATAAA	-17
PB.2318.2	chr11	-	1817	8	full-splice_match	DPAGT1	ENST00000392834.7	1817	8	5	-5	5	-2	multi-exon	FALSE	canonical	1	9684	junction_7	165845.8670671817	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	419	1324	25.0	1	True	AATAAA	-23
PB.2318.4	chr11	-	2680	5	novel_in_catalog	DPAGT1	novel	3274	11	NA	NA	2	-4	intron_retention	FALSE	canonical	1	423335	junction_3	36137.10485342593	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	1048	1743	20.0	1	True	AATAAA	-13
PB.8524.2	chr3	+	4396	25	full-splice_match	ECT2	ENST00000540509.5	4406	25	10	0	-9	0	multi-exon	TRUE	canonical	1	28915	junction_2	116987.23115389797	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	509	3160	25.0	2	True	AATAAA	-19
PB.8524.3	chr3	+	2428	21	incomplete-splice_match	ECT2	ENST00000232458.9	4087	24	13	13614	-9	1753	3prime_fragment	FALSE	canonical	1	185991	junction_1	86717.93136559185	NA	2	NA	TRUE	NA	NA	NA	C	coding	747	2241	186	2426	60.0	2	True	NA	NA
PB.551.1	chr1	-	2580	20	novel_not_in_catalog	ARHGAP29	novel	3439	26	NA	NA	-10143	-3256	any annotated donor/acceptor	FALSE	canonical	1	36019	junction_19	73471.89690843772	NA	4	NA	TRUE	NA	NA	NA	A	coding	778	2334	245	2578	55.0	-64	True	AATGAA	-12
PB.6351.10	chr2	-	7109	30	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-34	-1	intron_retention	FALSE	canonical	1	22450	junction_28	83456.06519378333	NA	1	NA	TRUE	NA	NA	NA	C	coding	1151	3456	383	3838	20.0	-24	True	ATTAAA	-15
PB.10227.1	chr6	-	1787	8	full-splice_match	MTFR2	ENST00000420702.5	1793	8	5	1	5	-1	multi-exon	FALSE	canonical	1	42068	junction_7	25635.013058912456	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	416	1543	15.0	1	True	AATAAA	-17
PB.11538.1	chr9	+	2368	17	novel_in_catalog	MELK	novel	2485	18	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	5844	junction_3	109774.34284645521	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	186	2024	10.0	-36	True	AATAAA	-16
PB.8769.5	chr4	+	6135	8	full-splice_match	SLAIN2	ENST00000264313.10	6299	8	147	17	147	-17	multi-exon	FALSE	canonical	1	187169	junction_1	101210.85045788402	NA	2	NA	TRUE	NA	NA	NA	C	coding	581	1746	272	2017	40.0	-4	True	AATAAA	-12
PB.3423.2	chr14	-	2200	11	full-splice_match	L2HGDH	ENST00000421284.7	1958	11	0	-242	0	242	multi-exon	FALSE	canonical	1	34553	junction_1	22349.364692536565	NA	1	1	TRUE	NA	NA	NA	C	coding	463	1392	80	1471	15.0	-4	True	NA	NA
PB.11046.5	chr8	+	3254	6	full-splice_match	BNIP3L	ENST00000380629.6	3610	6	150	206	-6	-206	multi-exon	FALSE	canonical	1	972232	junction_1	503860.3180632505	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	84	743	65.0	-20	True	AGTAAA	-16
PB.10106.1	chr6	-	4421	7	full-splice_match	RRAGD	ENST00000369415.8	4900	7	115	364	-85	-2	multi-exon	FALSE	canonical	1	217941	junction_6	26675.15160219338	NA	3	NA	TRUE	NA	NA	NA	A	coding	400	1203	163	1365	30.0	5	True	ATTAAA	-22
PB.4481.4	chr16	+	2823	16	full-splice_match	C16orf70	ENST00000219139.7	2865	16	-1	43	-1	-43	multi-exon	FALSE	canonical	1	125486	junction_1	46120.113218517676	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	190	1458	20.0	-10	True	AATAAA	-15
PB.4481.2	chr16	+	2481	17	novel_in_catalog	C16orf70	novel	1025	12	NA	NA	-16	-316	intron_retention	FALSE	canonical	1	21919	junction_1	64995.78154568475	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	121	1389	25.0	-1	True	NA	NA
PB.4481.3	chr16	+	2748	17	full-splice_match	C16orf70	ENST00000569600.5	1353	17	-18	-1377	-13	-31	multi-exon	FALSE	canonical	1	43063	junction_1	61377.71730733699	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	103	1371	10.0	2	True	AATAAA	-27
PB.9350.19	chr5	-	2246	19	incomplete-splice_match	TTC37	ENST00000358746.6	5706	43	30	58193	0	0	3prime_fragment	FALSE	canonical	1	222162	junction_17	104706.46469264492	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1977	270	2246	60.0	-1	True	AATATA	-33
PB.4481.1	chr16	+	2862	18	novel_not_in_catalog	C16orf70	novel	1025	12	NA	NA	-20	-43	intron_retention	FALSE	canonical	1	941	junction_4	88746.0879139339	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	430	1497	20.0	-5	True	AATAAA	-15
PB.8131.11	chr3	-	2387	10	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	5	-1	intron_retention	FALSE	canonical	1	517971	junction_9	133599.75517775308	NA	2	1	TRUE	NA	NA	NA	C	coding	305	918	158	1075	10.0	-11	True	ATTAAA	-17
PB.746.22	chr1	-	3156	11	novel_not_in_catalog	PI4KB	novel	3934	11	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	1545	junction_4	211338.72643273405	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	191	2437	15.0	-33	True	AATAAA	-14
PB.746.23	chr1	-	2434	1	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-21	-9367	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	83	252	189	440	90.0	-41	True	NA	NA
PB.9780.5	chr6	+	2891	1	novel_in_catalog	ACOT13	novel	4391	4	NA	NA	-14	-31767	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-20	True	NA	NA
PB.9780.4	chr6	+	727	3	full-splice_match	ACOT13	ENST00000230048.4	4047	3	-14	3334	-14	-2	multi-exon	FALSE	canonical	1	889966	junction_1	29471.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	208	630	40.0	-20	True	AATAAA	-14
PB.9780.3	chr6	+	3297	3	full-splice_match	ACOT13	ENST00000230048.4	4047	3	-14	764	-14	-764	multi-exon	FALSE	canonical	1	889966	junction_1	29471.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	208	630	35.0	-20	True	NA	NA
PB.9780.2	chr6	+	4099	3	full-splice_match	ACOT13	ENST00000230048.4	4047	3	-25	-27	11	8	multi-exon	FALSE	canonical	1	889966	junction_1	29471.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	219	641	75.0	-31	True	AATAAA	-44
PB.9780.1	chr6	+	4336	3	full-splice_match	ACOT13	ENST00000230048.4	4047	3	-28	-261	8	242	multi-exon	FALSE	canonical	1	889966	junction_1	29471.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	222	644	80.0	-34	True	AATAAA	-15
PB.4107.1	chr15	+	2066	1	antisense	novelGene_LINS1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	161	486	59	544	100.0	NA	False	NA	NA
PB.11046.6	chr8	+	3378	6	novel_not_in_catalog	BNIP3L	novel	3610	6	NA	NA	5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	880829.755765006	NA	3	1	TRUE	NA	NA	NA	C	coding	179	540	122	661	20.0	-7942	False	ATTAAA	-18
PB.12152.1	chrX	-	2189	5	incomplete-splice_match	ATRX	ENST00000395603.7	10218	34	262833	1211	-915	-19	5prime_fragment	FALSE	canonical	1	354675	junction_3	35060.03464327296	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	142	762	100.0	NA	False	NA	NA
PB.46.2	chr1	+	3013	7	full-splice_match	DFFB	ENST00000378206.5	2842	7	-231	60	5	-51	multi-exon	FALSE	canonical	1	666	junction_2	19634.9936649397	NA	15	NA	TRUE	NA	NA	NA	C	coding	274	825	561	1385	20.0	0	True	TTTAAA	-19
PB.9007.6	chr4	-	878	5	full-splice_match	ANAPC10	ENST00000507656.5	1025	5	-17	164	-2	-3	multi-exon	FALSE	canonical	1	41751	junction_3	40020.418315998395	NA	2	1	TRUE	NA	NA	NA	C	coding	185	558	112	669	45.0	-23	True	AATAAA	-21
PB.9007.5	chr4	-	2055	6	novel_not_in_catalog	AC098588.1	novel	1890	9	NA	NA	-15	-784462	intron_retention	FALSE	canonical	1	2759	junction_5	25562.454658346098	NA	2	NA	TRUE	NA	NA	NA	B	coding	176	531	856	1386	50.0	6	True	AATAAA	-22
PB.9007.4	chr4	-	1729	5	novel_in_catalog	AC098588.1	novel	1890	9	NA	NA	-18	-784461	intron_retention	FALSE	canonical	1	2759	junction_4	36922.92806644674	NA	2	1	TRUE	NA	NA	NA	B	coding	219	660	859	1518	45.0	3	True	AATAAA	-23
PB.9007.3	chr4	-	2194	1	novel_in_catalog	AC098588.1	novel	1890	9	NA	NA	100883	-784397	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	NA	False	AAGAAA	-16
PB.9007.2	chr4	-	2966	1	novel_in_catalog	AC098588.1	novel	1890	9	NA	NA	103505	-781003	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.9007.1	chr4	-	4317	5	full-splice_match	ANAPC10	ENST00000507656.5	1025	5	5	-3297	0	2872	multi-exon	FALSE	canonical	1	41751	junction_3	40020.418315998395	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	90	647	100.0	-1	True	NA	NA
PB.8869.1	chr4	-	1695	7	full-splice_match	HSD17B11	ENST00000358290.8	1885	7	187	3	-11	-3	multi-exon	FALSE	canonical	1	599275	junction_3	113697.38999606221	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	130	1032	20.0	-31	True	AATAAA	-13
PB.8869.2	chr4	-	1485	7	full-splice_match	HSD17B11	ENST00000358290.8	1885	7	168	232	-30	108	multi-exon	FALSE	canonical	1	599275	junction_3	113697.38999606221	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	149	1051	30.0	-50	True	AATAAA	-13
PB.8511.17	chr3	+	4707	9	novel_in_catalog	SEC62	novel	363	2	NA	NA	-2	-1911	intron_retention	FALSE	canonical	1	10573	junction_1	613103.1793739431	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	223	1308	35.0	1	True	NA	NA
PB.8859.1	chr4	-	3666	13	novel_not_in_catalog	HPSE	novel	4615	12	NA	NA	3	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	20984.945758143436	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	98	1729	25.0	-2	True	AATAAA	-19
PB.12124.1	chrX	+	1386	6	full-splice_match	IGBP1	ENST00000342206.10	1862	6	473	3	459	-3	multi-exon	FALSE	canonical	1	157413	junction_3	150785.55926931463	NA	0	NA	TRUE	NA	NA	NA	A	coding	339	1020	27	1046	30.0	-13	False	AATAAA	-30
PB.12219.9	chrX	-	5063	15	novel_in_catalog	ACSL4	novel	390	2	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	11664	junction_14	186800.56948375204	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	359	2371	30.0	10	True	AATAAA	-16
PB.12219.8	chrX	-	5232	16	full-splice_match	ACSL4	ENST00000469796.6	5225	16	-2	-5	-2	5	multi-exon	FALSE	canonical	1	12452	junction_14	199356.6211695346	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	523	2535	30.0	-7	True	AATAAA	-21
PB.10393.2	chr7	+	2094	6	full-splice_match	RAC1	ENST00000348035.8	2323	6	216	13	176	-13	multi-exon	FALSE	canonical	1	486	junction_2	286398.05133736506	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	130	576	30.0	-2063	False	AATAAA	-11
PB.10393.3	chr7	+	1041	6	full-splice_match	RAC1	ENST00000348035.8	2323	6	-2	1284	-2	173	multi-exon	FALSE	canonical	1	486	junction_2	286398.05133736506	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	216	794	30.0	-12	True	ATTAAA	-19
PB.10393.1	chr7	+	914	6	full-splice_match	RAC1	ENST00000348035.8	2323	6	-65	1474	-65	1	multi-exon	FALSE	canonical	1	486	junction_2	286398.05133736506	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	279	857	95.0	-2344	False	NA	NA
PB.12219.3	chrX	-	4867	15	novel_in_catalog	ACSL4	novel	390	2	NA	NA	-8	5	no_combination_of_known_junctions	FALSE	canonical	1	33358	junction_14	182172.15240049615	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	158	2170	30.0	589	False	AATAAA	-21
PB.12219.2	chrX	-	4940	16	novel_not_in_catalog	ACSL4	novel	390	2	NA	NA	15	5	any annotated donor/acceptor	FALSE	canonical	1	3631	junction_14	200948.38729566577	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	231	2243	30.0	-27	True	AATAAA	-21
PB.12219.1	chrX	-	2349	16	novel_in_catalog	ACSL4	novel	464	3	NA	NA	1	36	no_combination_of_known_junctions	FALSE	canonical	1	5329	junction_1	218163.06696397738	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	229	2322	15.0	-4	True	NA	NA
PB.1130.6	chr1	-	1335	9	full-splice_match	BPNT1	ENST00000322067.11	2465	9	63	1067	-18	-818	multi-exon	FALSE	canonical	1	251573	junction_5	71572.12311673799	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	114	1040	90.0	-3	True	NA	NA
PB.5428.4	chr18	+	3706	11	full-splice_match	IMPACT	ENST00000284202.8	3792	11	86	0	3	0	multi-exon	FALSE	canonical	1	122474	junction_8	77478.29467308892	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	56	1018	20.0	0	True	NA	NA
PB.529.1	chr1	+	2877	3	full-splice_match	LRRC8C	ENST00000370454.8	7218	3	-38	4379	-38	-4379	multi-exon	FALSE	canonical	1	94471	junction_1	18074.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	294	2705	30.0	10	True	AATAAA	-26
PB.2239.3	chr11	-	5209	5	full-splice_match	MAML2	ENST00000524717.5	7106	5	-133	2030	-133	127	multi-exon	FALSE	canonical	1	61153	junction_4	26598.50146507318	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	1419	4889	70.0	-1	True	NA	NA
PB.5428.3	chr18	+	3743	11	novel_not_in_catalog	IMPACT	novel	3792	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	1106	junction_6	95991.8305766173	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	82	1062	30.0	6	True	NA	NA
PB.2239.1	chr11	-	7153	5	full-splice_match	MAML2	ENST00000524717.5	7106	5	-51	4	-51	-4	multi-exon	FALSE	canonical	1	61153	junction_4	26598.50146507318	NA	1	NA	TRUE	NA	NA	NA	C	coding	1156	3471	1337	4807	35.0	-37	True	ATTAAA	-18
PB.5428.1	chr18	+	3702	11	novel_not_in_catalog	IMPACT	novel	3792	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	5927	junction_6	95057.326894038	NA	3	1	TRUE	NA	NA	NA	C	coding	303	912	110	1021	30.0	3	True	NA	NA
PB.514.4	chr1	-	1575	12	incomplete-splice_match	ODF2L	ENST00000294678.6	4267	18	-41	8738	2	-13	3prime_fragment	FALSE	canonical	1	53440	junction_10	34178.182039433595	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1227	349	1575	75.0	-39	True	AGTAAA	-26
PB.9059.5	chr4	-	6772	38	novel_in_catalog	DDX60L	novel	3509	9	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	15314	junction_37	38815.15333559863	NA	0	NA	TRUE	NA	NA	NA	C	coding	1686	5061	301	5361	15.0	764	False	AATAAA	-14
PB.514.6	chr1	-	2978	2	full-splice_match	ODF2L	ENST00000478286.2	1650	2	-8	-1320	-8	1320	multi-exon	FALSE	canonical	1	62080	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-49	True	AATAAA	-20
PB.514.1	chr1	-	2172	16	novel_in_catalog	ODF2L	novel	7560	18	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	1	16281	junction_14	59832.85886645676	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	611	2152	35.0	-41	True	AATAAA	-20
PB.514.2	chr1	-	2307	17	novel_in_catalog	ODF2L	novel	7560	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	53440	junction_15	54712.002003066875	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	360	2294	25.0	-50	True	AATAAA	-13
PB.514.3	chr1	-	2180	15	novel_in_catalog	ODF2L	novel	7560	18	NA	NA	2	951	combination_of_known_junctions	FALSE	canonical	1	16281	junction_13	66733.86584514458	NA	4	NA	TRUE	NA	NA	NA	C	coding	423	1272	626	1897	20.0	-56	False	AATAAA	-19
PB.9583.3	chr5	+	3319	14	novel_not_in_catalog	LARP1	novel	6595	19	NA	NA	-350	940	intron_retention	FALSE	non_canonical	0	0	junction_1	356268.8559953684	NA	3	NA	TRUE	NA	NA	NA	B	coding	747	2244	312	2555	80.0	-1978	False	NA	NA
PB.401.1	chr1	-	5180	25	full-splice_match	EPS15	ENST00000371733.7	5225	25	53	-8	-21	8	multi-exon	FALSE	canonical	1	221574	junction_24	136702.54397982341	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	45	2735	15.0	-10	True	NA	NA
PB.401.7	chr1	-	4990	24	novel_in_catalog	EPS15	novel	4736	23	NA	NA	-6	-151	no_combination_of_known_junctions	FALSE	canonical	1	12754	junction_16	165684.8900962659	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	104	2704	30.0	1	True	AATAAA	-16
PB.401.6	chr1	-	5230	27	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-17	-147	any annotated donor/acceptor	FALSE	canonical	1	3956	junction_24	191099.27926469708	NA	2	NA	TRUE	NA	NA	NA	C	coding	718	2157	784	2940	25.0	-6	True	AATAAA	-20
PB.401.4	chr1	-	5040	25	full-splice_match	EPS15	ENST00000371733.7	5225	25	37	148	37	-148	multi-exon	FALSE	canonical	1	221574	junction_24	136702.54397982341	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	61	2751	25.0	1	True	AATAAA	-19
PB.401.9	chr1	-	4735	25	full-splice_match	EPS15	ENST00000371733.7	5225	25	53	437	-21	-437	multi-exon	FALSE	canonical	1	221574	junction_24	136702.54397982341	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	45	2735	25.0	-10	True	NA	NA
PB.401.8	chr1	-	5197	26	novel_in_catalog	EPS15	novel	4736	23	NA	NA	-16	-152	no_combination_of_known_junctions	FALSE	canonical	1	5428	junction_17	180988.86102977276	NA	35	5	TRUE	NA	NA	NA	C	coding	708	2127	786	2912	30.0	-9	True	AATAAA	-15
PB.4964.8	chr17	+	3103	11	novel_not_in_catalog	CDC6	novel	4810	12	NA	NA	-5	51	intron_retention	FALSE	non_canonical	0	0	junction_8	155938.94355150673	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	227	1414	30.0	-5	True	GATAAA	-21
PB.4964.9	chr17	+	3027	12	full-splice_match	CDC6	ENST00000647931.1	2820	12	-4	-203	-4	203	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	226	1908	25.0	-4	True	GATAAA	-20
PB.9017.2	chr4	+	3663	7	full-splice_match	EDNRA	ENST00000511804.5	1569	7	-18	-2076	-3	0	multi-exon	FALSE	canonical	1	4048	junction_1	36327.07217497104	NA	5	NA	TRUE	NA	NA	NA	C	coding	202	609	719	1327	20.0	-231	False	AATAAA	-18
PB.9017.3	chr4	+	2195	8	full-splice_match	EDNRA	ENST00000648866.1	4135	8	162	1778	162	298	multi-exon	FALSE	canonical	1	39451	junction_1	22815.221744819974	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	354	1637	85.0	-3	True	NA	NA
PB.5452.9	chr18	+	3943	22	full-splice_match	ELP2	ENST00000358232.10	8459	22	28	4488	0	1036	multi-exon	FALSE	canonical	1	336511	junction_5	122453.4330596543	NA	1	NA	TRUE	NA	NA	NA	C	coding	826	2481	36	2516	35.0	-4	True	NA	NA
PB.5452.8	chr18	+	7350	22	full-splice_match	ELP2	ENST00000358232.10	8459	22	28	1081	0	-1081	multi-exon	FALSE	canonical	1	336511	junction_5	122453.4330596543	NA	23	NA	TRUE	NA	NA	NA	C	coding	826	2481	36	2516	100.0	-4	True	NA	NA
PB.189.3	chr1	-	2961	4	full-splice_match	STMN1	ENST00000465604.1	2947	4	-2	-12	-2	12	multi-exon	FALSE	canonical	1	3698624	junction_3	2345635.486480417	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	94	432	20.0	-1	True	AATAAA	-29
PB.5452.5	chr18	+	5809	22	full-splice_match	ELP2	ENST00000358232.10	8459	22	23	2627	0	-2627	multi-exon	FALSE	canonical	1	336511	junction_5	122453.4330596543	NA	2	NA	TRUE	NA	NA	NA	C	coding	826	2481	41	2521	30.0	-9	True	NA	NA
PB.4964.1	chr17	+	4607	12	full-splice_match	CDC6	ENST00000209728.8	4810	12	204	-1	-46	1	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	2	NA	TRUE	NA	NA	NA	C	coding	560	1683	268	1950	20.0	-121	False	AATAAA	-20
PB.4964.2	chr17	+	2059	12	full-splice_match	CDC6	ENST00000647931.1	2820	12	-36	797	-36	-116	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	258	1940	45.0	-111	False	AAAACA	-26
PB.4964.3	chr17	+	3292	11	novel_in_catalog	CDC6	novel	4810	12	NA	NA	-35	0	intron_retention	FALSE	canonical	1	389641	junction_9	73491.30890084896	NA	6	NA	TRUE	NA	NA	NA	C	coding	532	1599	257	1855	15.0	-110	False	AATATA	-16
PB.4964.4	chr17	+	2750	12	full-splice_match	CDC6	ENST00000647931.1	2820	12	70	0	20	0	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	3	1	TRUE	NA	NA	NA	C	coding	560	1683	152	1834	15.0	-5	False	AATATA	-16
PB.4964.5	chr17	+	2756	12	full-splice_match	CDC6	ENST00000647931.1	2820	12	-29	93	-29	-93	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	251	1933	15.0	-104	False	NA	NA
PB.4964.6	chr17	+	2282	12	full-splice_match	CDC6	ENST00000647931.1	2820	12	-29	567	-29	114	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	251	1933	0.0	-104	False	NA	NA
PB.4964.7	chr17	+	2948	13	novel_not_in_catalog	CDC6	novel	4810	12	NA	NA	-7	1	any annotated donor/acceptor	FALSE	canonical	1	10718	junction_9	180910.66923321498	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	229	2031	20.0	-7	True	AATATA	-17
PB.9287.20	chr5	+	3261	25	novel_not_in_catalog	TNPO1	novel	11183	25	NA	NA	-34	-151	any annotated donor/acceptor	FALSE	canonical	1	4752	junction_24	174998.953542898	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	126	2798	30.0	-3	True	TATAAA	-22
PB.6839.3	chr2	+	5481	26	full-splice_match	ITGA6	ENST00000264107.11	5618	26	103	34	103	-34	multi-exon	FALSE	canonical	1	344563	junction_15	107924.04382804788	NA	0	NA	TRUE	NA	NA	NA	C	coding	1073	3222	132	3353	30.0	-22	False	AATAAA	-19
PB.9287.21	chr5	+	2966	24	novel_in_catalog	TNPO1	novel	11183	25	NA	NA	-25	-5	no_combination_of_known_junctions	FALSE	canonical	1	15590	junction_19	177798.22903985542	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	117	2693	70.0	6	True	NA	NA
PB.5638.13	chr19	+	2743	20	incomplete-splice_match	SAFB	ENST00000592224.5	3014	21	3285	-4	3250	-1	5prime_fragment	FALSE	canonical	1	493782	junction_14	307663.5280495836	NA	1	NA	TRUE	NA	NA	NA	C	coding	788	2367	198	2564	30.0	3222	False	AATAAA	-18
PB.189.4	chr1	-	999	5	full-splice_match	STMN1	ENST00000455785.6	1504	5	47	458	-2	8	multi-exon	FALSE	canonical	1	3698624	junction_4	2033726.112171757	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	94	543	15.0	-1	True	AATAAA	-25
PB.5638.12	chr19	+	2682	18	novel_not_in_catalog	SAFB	novel	2708	19	NA	NA	-3	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	387497.53658737906	NA	4	1	TRUE	NA	NA	NA	C	coding	809	2430	71	2500	25.0	5	True	AATAAA	-21
PB.152.21	chr1	-	2396	11	novel_in_catalog	USP48	novel	4309	26	NA	NA	22	-2	intron_retention	FALSE	canonical	1	6370	junction_2	164025.51118957074	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	217	1413	15.0	-25	True	AATAAA	-12
PB.152.20	chr1	-	2317	11	full-splice_match	USP48	ENST00000421625.6	2818	11	504	-3	93	3	multi-exon	FALSE	canonical	1	354577	junction_10	93328.48502600908	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	146	1603	5.0	-11	True	AATAAA	-17
PB.152.23	chr1	-	1960	11	full-splice_match	USP48	ENST00000421625.6	2818	11	388	470	8	291	multi-exon	FALSE	canonical	1	354577	junction_10	93328.48502600908	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	262	1719	30.0	-13	False	AATAAA	-26
PB.152.22	chr1	-	2198	11	novel_in_catalog	USP48	novel	4309	26	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	2359	junction_10	164127.85426310185	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	413	1489	15.0	1183	False	AATAAA	-12
PB.5638.11	chr19	+	1662	12	incomplete-splice_match	SAFB	ENST00000588852.1	2842	21	-18	14201	-4	705	3prime_fragment	FALSE	canonical	1	526565	junction_4	317859.5670436192	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1590	72	1661	50.0	4	True	GATAAA	-38
PB.3148.1	chr13	+	2542	1	antisense	novelGene_ZC3H13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6847	False	NA	NA
PB.9270.1	chr5	+	4097	7	full-splice_match	MARVELD2	ENST00000646733.1	4305	7	5	203	5	-203	multi-exon	FALSE	canonical	1	22197	junction_1	26070.502690887177	NA	2	NA	TRUE	NA	NA	NA	A	coding	558	1677	66	1742	85.0	5	True	NA	NA
PB.5019.1	chr17	-	2638	1	novel_in_catalog	CCDC200	novel	649	4	NA	NA	13091	-63085	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.2654.1	chr12	+	1271	5	full-splice_match	RDH5	ENST00000548082.1	1259	5	-14	2	1	-2	multi-exon	FALSE	canonical	1	35912	junction_1	48872.16310181083	NA	0	NA	TRUE	NA	NA	NA	A	coding	318	957	157	1113	30.0	6	True	AATAAA	-30
PB.2654.2	chr12	+	3056	4	novel_in_catalog	BLOC1S1-RDH5	novel	1024	3	NA	NA	3810	0	intron_retention	FALSE	canonical	1	26144	junction_1	60110.5750152722	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	7	True	AATAAA	-30
PB.2061.2	chr11	+	3424	17	incomplete-splice_match	PCNX3	ENST00000355703.3	7105	35	9878	8	524	-8	5prime_fragment	FALSE	canonical	1	214908	junction_9	61418.192699593295	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	29	2971	10.0	-8281	False	NA	NA
PB.11645.10	chr9	-	1956	15	full-splice_match	SPTLC1	ENST00000262554.6	1894	15	-25	-37	-17	37	multi-exon	FALSE	canonical	1	12612	junction_13	224508.00974620946	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	32	1453	25.0	4	True	AATAAA	-21
PB.5624.1	chr19	-	2791	10	novel_not_in_catalog	SH3GL1	novel	2516	10	NA	NA	868	0	any annotated donor/acceptor	FALSE	canonical	1	9229	junction_9	279374.64318605105	NA	3	NA	TRUE	NA	NA	NA	C	coding	358	1077	486	1562	5.0	NA	False	ATTAAA	-14
PB.8511.14	chr3	+	2662	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	43	3863	0	679	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	16	1215	25.0	-3	True	ATTAAA	-20
PB.5624.2	chr19	-	3553	9	novel_not_in_catalog	SH3GL1	novel	2516	10	NA	NA	638	0	intron_retention	FALSE	canonical	1	9229	junction_8	277868.9151499487	NA	5	NA	TRUE	NA	NA	NA	C	coding	356	1071	716	1786	5.0	NA	False	ATTAAA	-14
PB.6861.1	chr2	+	3190	4	novel_not_in_catalog	LINC01117	novel	699	4	NA	NA	-62	2428	any annotated donor/acceptor	FALSE	canonical	1	2744	junction_1	691.8328314460558	NA	4	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-1525	False	AATAAA	-13
PB.491.1	chr1	-	1579	1	antisense	novelGene_IFI44L_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7220.2	chr20	+	2306	6	novel_not_in_catalog	FRG1DP	novel	771	9	NA	NA	-163	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	31	3	TRUE	NA	NA	NA	B	coding	130	393	632	1024	20.0	NA	False	AATAAA	-26
PB.2061.1	chr11	+	3744	20	incomplete-splice_match	PCNX3	ENST00000355703.3	7105	35	9147	0	-207	0	5prime_fragment	FALSE	canonical	1	205009	junction_2	63432.363975525506	NA	2	NA	TRUE	NA	NA	NA	C	coding	994	2985	299	3283	10.0	-9012	False	NA	NA
PB.7220.3	chr20	+	3136	4	novel_not_in_catalog	FRG1DP	novel	771	9	NA	NA	-91	-6374	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	B	coding	122	369	1	369	20.0	NA	False	AATAAA	-17
PB.8404.11	chr3	+	3070	18	incomplete-splice_match	DNAJC13	ENST00000650455.1	7707	57	83083	-12	-12217	1	5prime_fragment	FALSE	canonical	1	227102	junction_3	64902.77739233318	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	76	2319	25.0	NA	False	AATAAA	-28
PB.1064.3	chr1	-	6546	1	novel_in_catalog	ELK4	novel	2535	10	NA	NA	11169	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	9246	False	AATAAA	-8
PB.10228.33	chr6	-	2995	12	incomplete-splice_match	BCLAF1	ENST00000531224.5	7263	13	7	4410	0	28	3prime_fragment	FALSE	canonical	1	165818	junction_3	137561.63345362598	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2550	445	2994	55.0	-1	True	AAGAAA	-19
PB.4032.1	chr15	-	3384	3	novel_not_in_catalog	MEX3B	novel	3528	2	NA	NA	0	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	44278.5	NA	8	1	TRUE	NA	NA	NA	A	coding	569	1710	356	2065	25.0	1	True	AATAAA	-12
PB.7220.1	chr20	+	5514	1	genic	FRG1DP	novel	NA	NA	NA	NA	-163	-17021	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	56	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.3698.1	chr14	-	3913	1	incomplete-splice_match	AHNAK2	ENST00000555122.1	18335	6	29315	10	12738	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	944	2835	270	3104	20.0	NA	False	AATAAA	-17
PB.10521.7	chr7	+	2651	6	full-splice_match	YKT6	ENST00000496112.5	1270	6	23	-1404	-21	1	multi-exon	FALSE	canonical	1	23966	junction_5	447208.06726560736	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	146	640	10.0	11	True	GATAAA	-17
PB.996.11	chr1	+	5530	15	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-160	217686	-160	-4882	3prime_fragment	FALSE	canonical	1	26732	junction_1	3577.0268701243826	NA	2	NA	TRUE	NA	NA	NA	C	coding	801	2406	390	2795	30.0	0	True	AATGAA	-34
PB.10521.5	chr7	+	2818	8	full-splice_match	YKT6	ENST00000447123.5	1085	8	-34	-1699	10	0	multi-exon	FALSE	canonical	1	60793	junction_6	451633.09562768415	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	159	734	5.0	-2	True	GATAAA	-18
PB.11509.2	chr9	+	2712	8	novel_not_in_catalog	UBAP1	novel	2029	6	NA	NA	1	-92	any annotated donor/acceptor	FALSE	canonical	1	2559	junction_1	249181.7741924025	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	308	1816	55.0	-8	True	ATTAAA	-6
PB.7055.4	chr2	+	3214	27	novel_not_in_catalog	SP140	novel	580	5	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	2538	junction_24	44560.89936602684	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	98	2683	20.0	6	True	NA	NA
PB.10521.4	chr7	+	7614	4	novel_in_catalog	YKT6	novel	1270	6	NA	NA	9	0	intron_retention	FALSE	canonical	1	557197	junction_1	344082.118675179	NA	5	NA	TRUE	NA	NA	NA	C	coding	107	324	160	483	10.0	-3	True	GATAAA	-16
PB.11121.5	chr8	+	5012	16	novel_in_catalog	HGSNAT	novel	5236	18	NA	NA	3	-29	no_combination_of_known_junctions	FALSE	canonical	1	13102	junction_8	81363.03965970462	NA	2	NA	TRUE	NA	NA	NA	C	coding	571	1716	40	1755	30.0	-39	True	AATAAA	-17
PB.10521.3	chr7	+	2277	6	novel_in_catalog	YKT6	novel	1270	6	NA	NA	4	1353	combination_of_known_junctions	FALSE	canonical	1	3913	junction_5	453593.3155583314	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	165	917	35.0	-8	True	NA	NA
PB.7055.6	chr2	+	3146	26	novel_in_catalog	SP140	novel	580	5	NA	NA	6	2	no_combination_of_known_junctions	FALSE	canonical	1	1665	junction_9	46329.949243814204	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	91	2613	20.0	-11	False	NA	NA
PB.10521.2	chr7	+	3855	6	novel_in_catalog	YKT6	novel	1270	6	NA	NA	0	-47	intron_retention	FALSE	canonical	1	557197	junction_1	274370.0745730117	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	169	663	25.0	-12	True	CATAAA	-17
PB.10878.16	chr7	+	2936	11	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	7968	junction_2	475682.20740284165	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	805	1824	45.0	-62	True	AATAAA	-17
PB.10878.17	chr7	+	2721	8	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-14	-3400	no_combination_of_known_junctions	FALSE	canonical	1	5536	junction_7	407303.73468908126	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	369	1346	85.0	-62	True	NA	NA
PB.10878.14	chr7	+	4342	11	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-14	2043	any annotated donor/acceptor	FALSE	canonical	1	9114	junction_10	420195.1450553064	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	369	1547	10.0	-62	True	AATAAA	-25
PB.10878.15	chr7	+	4320	10	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-14	0	intron_retention	FALSE	canonical	1	8970	junction_1	392146.55841882434	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	2189	3208	45.0	-62	True	AATAAA	-17
PB.10878.12	chr7	+	2291	9	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-16	-20	no_combination_of_known_junctions	FALSE	canonical	1	1845	junction_2	471361.76172838575	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	371	1450	40.0	-64	True	ATTAAA	-14
PB.10521.1	chr7	+	1039	7	full-splice_match	YKT6	ENST00000223369.2	2696	7	-86	1743	-5	-44	multi-exon	FALSE	canonical	1	557197	junction_1	250817.96018455076	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	174	770	20.0	-17	True	CATAAA	-20
PB.7650.5	chr22	-	2300	2	full-splice_match	ZNF70	ENST00000341976.4	6924	2	-10	4634	-10	-4634	multi-exon	FALSE	canonical	1	14639	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	472	1812	40.0	9	True	AAGAAA	-28
PB.10878.11	chr7	+	2887	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-16	-1147	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	431367.5898119524	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	371	1378	35.0	-64	True	NA	NA
PB.7320.1	chr20	+	2237	3	full-splice_match	ZSWIM1	ENST00000372520.1	2168	3	-69	0	-55	0	multi-exon	FALSE	non_canonical	0	0	junction_2	26505.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	485	1458	151	1608	15.0	-9102	False	AATAAA	-20
PB.11932.28	chr9	+	2302	16	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	99	0	combination_of_known_junctions	FALSE	canonical	1	16216	junction_1	121091.96984452217	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	128	2035	45.0	-4309	False	ATTAAA	-19
PB.1402.8	chr10	+	10049	62	novel_not_in_catalog	WDFY4	novel	2193	11	NA	NA	560	-1	any annotated donor/acceptor	FALSE	canonical	1	5656	junction_1	41569.580792635665	NA	1	NA	TRUE	NA	NA	NA	C	coding	3184	9555	115	9669	25.0	-30	False	ATTAAA	-20
PB.10878.18	chr7	+	2627	9	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-13	-1	no_combination_of_known_junctions	FALSE	canonical	1	5536	junction_7	411632.76999178453	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	368	1516	45.0	-61	True	AATAAA	-16
PB.10878.19	chr7	+	2991	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-8	-1649	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	431367.5898119524	NA	3	NA	TRUE	NA	NA	NA	C	coding	335	1008	363	1370	15.0	-56	True	NA	NA
PB.8233.4	chr3	-	2512	8	full-splice_match	FAM86DP	ENST00000459803.5	2425	8	-76	-11	-14	-3	multi-exon	FALSE	canonical	1	3977	junction_4	35041.842272299764	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	369	1106	30.0	-55	False	NA	NA
PB.8038.24	chr3	+	3595	17	novel_not_in_catalog	CTNNB1	novel	3278	16	NA	NA	3	-2	intron_retention	FALSE	canonical	1	537	junction_1	979736.1928072443	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	456	2801	10.0	0	True	ATTAAA	-13
PB.12079.1	chrX	+	2252	17	full-splice_match	CCDC22	ENST00000376227.3	2319	17	65	2	36	-2	multi-exon	TRUE	canonical	1	134125	junction_1	77451.68765347269	NA	0	NA	TRUE	NA	NA	NA	A	coding	627	1884	106	1989	30.0	36	True	AATAAA	-22
PB.10372.4	chr7	+	1513	16	incomplete-splice_match	IQCE	ENST00000470731.5	2251	18	11	7023	2	-3810	3prime_fragment	FALSE	canonical	1	43306	junction_1	35963.558413977276	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1389	124	1512	65.0	-368	False	NA	NA
PB.11043.8	chr8	+	5296	15	full-splice_match	CDCA2	ENST00000330560.7	3731	15	233	-1798	31	1798	multi-exon	FALSE	canonical	1	128822	junction_3	20852.22559452343	NA	4	NA	TRUE	NA	NA	NA	C	coding	1023	3072	245	3316	85.0	-3	True	TATAAA	-43
PB.8233.3	chr3	-	2083	6	novel_in_catalog	FAM86DP	novel	2152	5	NA	NA	-24	-2	no_combination_of_known_junctions	FALSE	canonical	1	1011	junction_2	37303.04587242173	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	NA	NA
PB.3269.15	chr13	+	3181	19	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	0	-531	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	184401.10939595746	NA	6	NA	TRUE	NA	NA	NA	B	coding	659	1980	243	2222	5.0	-255	False	ATTAAA	-14
PB.3269.14	chr13	+	3699	21	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-3	-32	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	224041.35115989193	NA	2	NA	TRUE	NA	NA	NA	B	coding	741	2226	16	2241	60.0	0	True	NA	NA
PB.3269.13	chr13	+	3265	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	4	-529	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	0	NA	TRUE	NA	NA	NA	B	coding	759	2280	25	2304	5.0	-9	True	ATTAAA	-16
PB.3269.12	chr13	+	5827	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	3	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	3	NA	TRUE	NA	NA	NA	B	coding	759	2280	26	2305	20.0	-10	True	NA	NA
PB.3269.11	chr13	+	3819	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	3	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	228769.97102695343	NA	1	NA	TRUE	NA	NA	NA	B	coding	764	2295	26	2320	25.0	-10	True	AATAAA	-24
PB.3269.10	chr13	+	2047	18	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-2	336	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	196215.31073414802	NA	1	NA	TRUE	NA	NA	NA	B	coding	672	2016	31	2046	40.0	-15	True	AATAAA	-15
PB.6338.22	chr2	-	5905	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	3	-215	combination_of_known_junctions	FALSE	canonical	1	236917	junction_8	196211.1807654971	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	270	3227	20.0	-14	True	AATAAA	-17
PB.2324.1	chr11	-	3625	13	novel_in_catalog	USP2	novel	2903	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	2813	junction_12	44897.33017017518	NA	5	NA	TRUE	NA	NA	NA	A	coding	605	1818	189	2006	25.0	5347	False	AATAAA	-19
PB.11891.1	chr9	+	1750	11	novel_not_in_catalog	RXRA	novel	5215	3	NA	NA	5460	-239	any annotated donor/acceptor	TRUE	canonical	1	64	junction_1	212701.23763271805	NA	1	NA	TRUE	NA	NA	NA	B	coding	435	1308	277	1584	15.0	-11	True	NA	NA
PB.3514.1	chr14	+	1967	8	full-splice_match	ARG2	ENST00000261783.3	2045	8	73	5	-65	-5	multi-exon	FALSE	canonical	1	250970	junction_1	68097.15689620926	NA	1	NA	TRUE	NA	NA	NA	A	coding	354	1065	108	1172	35.0	-3	True	AATAAA	-24
PB.10777.9	chr7	+	2147	8	full-splice_match	BCAP29	ENST00000005259.8	4572	8	231	2194	-38	230	multi-exon	FALSE	canonical	1	279651	junction_1	114728.25877165359	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	109	834	60.0	-3733	False	NA	NA
PB.11121.7	chr8	+	4156	17	novel_in_catalog	HGSNAT	novel	5236	18	NA	NA	17	-1032	no_combination_of_known_junctions	FALSE	canonical	1	8695	junction_8	79838.31990084614	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	883	1902	40.0	-25	True	NA	NA
PB.5489.4	chr18	-	4287	10	incomplete-splice_match	TCF4	ENST00000457482.7	2372	13	381	1811	-6	-1234	3prime_fragment	FALSE	canonical	1	160865	junction_9	62574.23476830944	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	131	1276	70.0	-1	True	NA	NA
PB.823.2	chr1	-	4208	6	full-splice_match	GLMP	ENST00000362007.5	1604	6	-7	-2597	1	-2	multi-exon	FALSE	canonical	1	265221	junction_5	147316.38046734655	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	35	1255	15.0	-8	True	NA	NA
PB.10521.8	chr7	+	2533	7	full-splice_match	YKT6	ENST00000223369.2	2696	7	162	1	162	1	multi-exon	FALSE	canonical	1	557197	junction_1	250817.96018455076	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	43	522	10.0	231	False	GATAAA	-17
PB.6368.3	chr2	+	3519	15	novel_in_catalog	TMEM214	novel	804	3	NA	NA	-5	0	intron_retention	FALSE	canonical	1	538876	junction_1	104062.45035103307	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	1215	2663	15.0	-32	True	AATAAA	-20
PB.1051.47	chr1	+	2567	9	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	5	272	intron_retention	FALSE	canonical	1	7347	junction_1	45727.93812525883	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	663	1903	2565	70.0	42	False	AATAAA	-22
PB.111.1	chr1	+	2142	10	novel_in_catalog	FBLIM1	novel	611	4	NA	NA	1	-158	combination_of_known_junctions	TRUE	canonical	1	3902	junction_2	110291.56647923922	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	511	1632	65.0	8	True	NA	NA
PB.1051.45	chr1	+	5058	20	full-splice_match	ZC3H11A	ENST00000332127.8	5015	20	-43	0	3	0	multi-exon	FALSE	canonical	1	3944	junction_3	189423.2616130538	NA	3	1	TRUE	NA	NA	NA	C	coding	810	2433	901	3333	25.0	40	False	AATAAA	-18
PB.1051.44	chr1	+	5938	19	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	3	-1	intron_retention	FALSE	canonical	1	2294	junction_2	193960.61216083422	NA	4	NA	TRUE	NA	NA	NA	C	coding	810	2433	1782	4214	20.0	40	False	AATAAA	-17
PB.1051.43	chr1	+	6186	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	14281	junction_2	193229.3167514881	NA	3	NA	TRUE	NA	NA	NA	C	coding	810	2433	2029	4461	25.0	40	False	AATAAA	-18
PB.1051.42	chr1	+	4289	18	full-splice_match	ZC3H11A	ENST00000367210.2	5877	18	3	1585	3	106	multi-exon	FALSE	canonical	1	19678	junction_5	192253.31443878662	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	1720	4152	10.0	40	False	NA	NA
PB.1051.41	chr1	+	4712	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	3	1	any annotated donor/acceptor	FALSE	canonical	1	6659	junction_3	198495.26314536278	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	554	2986	30.0	40	False	AATAAA	-19
PB.7103.2	chr2	-	2258	1	full-splice_match	CAPN10-DT	ENST00000567819.1	4000	1	90	1652	90	-1652	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	694	False	NA	NA
PB.260.2	chr1	+	2186	5	full-splice_match	ZBTB8A	ENST00000373510.8	7075	5	3	4886	1	63	multi-exon	FALSE	canonical	1	28200	junction_1	17124.32476041026	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	227	1552	80.0	-11	True	NA	NA
PB.5721.1	chr19	-	5107	5	full-splice_match	RAB3D	ENST00000222120.7	4273	5	22	-856	22	856	multi-exon	FALSE	canonical	1	99681	junction_4	76714.20611105872	NA	3	NA	TRUE	NA	NA	NA	C	coding	219	660	240	899	5.0	0	True	NA	NA
PB.5721.2	chr19	-	4261	5	full-splice_match	RAB3D	ENST00000222120.7	4273	5	11	1	11	-1	multi-exon	FALSE	canonical	1	99681	junction_4	76714.20611105872	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	251	910	20.0	-11	True	AATATA	-18
PB.5721.3	chr19	-	4126	5	full-splice_match	RAB3D	ENST00000222120.7	4273	5	14	133	14	-133	multi-exon	FALSE	canonical	1	99681	junction_4	76714.20611105872	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	248	907	5.0	-8	True	AATACA	-18
PB.111.3	chr1	+	3350	9	novel_in_catalog	FBLIM1	novel	611	4	NA	NA	-22	-5	combination_of_known_junctions	FALSE	canonical	1	82662	junction_1	91550.59533360502	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	301	1422	10.0	-5882	False	NA	NA
PB.260.4	chr1	+	2601	6	novel_not_in_catalog	AL033529.1	novel	3447	10	NA	NA	74377	4355	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	25102.638374481674	NA	0	NA	TRUE	NA	NA	NA	B	coding	441	1326	223	1548	100.0	-7	True	NA	NA
PB.1051.48	chr1	+	2313	14	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	5	-10	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_2	85451.04663230412	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1536	778	2313	60.0	42	False	NA	NA
PB.2664.4	chr12	+	2307	5	full-splice_match	SUOX	ENST00000266971.7	2364	5	55	2	-1	-2	multi-exon	FALSE	canonical	1	64790	junction_2	69336.58357741244	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	174	1811	15.0	0	True	AATAAA	-19
PB.11283.9	chr8	-	1988	4	full-splice_match	KLF10	ENST00000285407.10	3097	4	179	930	179	-923	multi-exon	FALSE	canonical	1	384119	junction_3	174255.745539582	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	123	1565	40.0	-1	True	AATAAA	-16
PB.111.2	chr1	+	1941	9	novel_in_catalog	FBLIM1	novel	611	4	NA	NA	-31	-158	combination_of_known_junctions	FALSE	canonical	1	82662	junction_1	91550.59533360502	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	310	1431	65.0	-1	True	NA	NA
PB.2664.1	chr12	+	2443	6	full-splice_match	SUOX	ENST00000394115.6	2394	6	-12	-37	-11	-2	multi-exon	FALSE	canonical	1	4735	junction_3	93043.28456068176	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	310	1947	15.0	-10	True	AATAAA	-19
PB.2664.3	chr12	+	2206	4	full-splice_match	SUOX	ENST00000356124.8	2306	4	97	3	-10	-3	multi-exon	FALSE	canonical	1	32249	junction_1	89531.60880319803	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	74	1711	15.0	-9	True	AATAAA	-18
PB.2664.2	chr12	+	2574	6	novel_in_catalog	SUOX	novel	2306	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	2296	junction_3	93625.81469787059	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	441	2078	15.0	-9	True	AATAAA	-19
PB.8453.3	chr3	-	3020	9	full-splice_match	PLSCR4	ENST00000354952.6	3303	9	36	247	0	-181	multi-exon	FALSE	canonical	1	65887	junction_8	37369.01027171445	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	206	1195	35.0	-1	True	AATAAA	-22
PB.111.5	chr1	+	2215	9	novel_in_catalog	FBLIM1	novel	611	4	NA	NA	-4	143	combination_of_known_junctions	FALSE	canonical	1	82662	junction_1	91550.59533360502	NA	2	1	TRUE	NA	NA	NA	C	coding	373	1122	283	1404	60.0	-15	True	NA	NA
PB.8973.11	chr4	-	5419	5	full-splice_match	ANKRD50	ENST00000504087.5	8794	5	-5	3380	-5	-73	multi-exon	FALSE	canonical	1	93396	junction_4	11157.245728673362	NA	0	NA	TRUE	NA	NA	NA	C	coding	1429	4290	1044	5333	80.0	-6	True	NA	NA
PB.11283.7	chr8	-	2522	4	full-splice_match	KLF10	ENST00000285407.10	3097	4	178	397	178	-390	multi-exon	FALSE	canonical	1	384119	junction_3	174255.745539582	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	124	1566	40.0	-2	True	NA	NA
PB.11283.6	chr8	-	2794	4	full-splice_match	KLF10	ENST00000285407.10	3097	4	193	110	193	-103	multi-exon	FALSE	canonical	1	384119	junction_3	174255.745539582	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	109	1551	60.0	13	True	NA	NA
PB.11283.5	chr8	-	2505	4	novel_not_in_catalog	KLF10	novel	3097	4	NA	NA	174	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	329898.18642221525	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	128	1108	30.0	-6	True	AATAAA	-15
PB.111.4	chr1	+	2116	9	full-splice_match	FBLIM1	ENST00000375766.7	3695	9	343	1236	-22	29	multi-exon	FALSE	canonical	1	106395	junction_1	88504.94093896326	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	298	1419	10.0	-5882	False	NA	NA
PB.11343.9	chr8	-	1855	13	novel_in_catalog	FAM49B	novel	3798	12	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	34058	junction_12	319849.64409376745	NA	2	NA	TRUE	NA	NA	NA	C	coding	324	975	210	1184	15.0	-72	False	AATAAA	-21
PB.11995.25	chrX	-	2620	18	full-splice_match	SH3KBP1	ENST00000397821.7	4731	18	23	2088	23	351	multi-exon	FALSE	canonical	1	231353	junction_17	179425.67553461212	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	269	2266	35.0	322	False	AATAAA	-22
PB.11995.26	chrX	-	2602	18	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	15	351	any annotated donor/acceptor	FALSE	canonical	1	20888	junction_16	221843.09654163997	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	374	2248	35.0	13	True	AATAAA	-22
PB.11995.27	chrX	-	2474	17	novel_in_catalog	SH3KBP1	novel	4731	18	NA	NA	33	344	no_combination_of_known_junctions	FALSE	canonical	1	41676	junction_3	236320.51951645533	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	259	2127	25.0	-15	True	AATAAA	-15
PB.11995.23	chrX	-	2024	13	full-splice_match	SH3KBP1	ENST00000379716.5	3819	13	81	1714	81	-28	multi-exon	FALSE	canonical	1	93609	junction_12	204731.74098758	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	45	1328	80.0	-8	True	NA	NA
PB.8954.3	chr4	-	4164	24	novel_not_in_catalog	SEC24D	novel	4030	23	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	972	junction_1	155757.40680282112	NA	0	NA	TRUE	NA	NA	NA	C	coding	1010	3033	275	3307	30.0	0	True	AATAAA	-18
PB.11995.29	chrX	-	1386	11	incomplete-splice_match	SH3KBP1	ENST00000397821.7	4731	18	23	58112	23	-19	3prime_fragment	FALSE	canonical	1	231353	junction_10	221938.40647461178	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1116	269	1384	70.0	322	False	ATTAAA	-33
PB.635.7	chr1	-	3797	18	full-splice_match	CSDE1	ENST00000530886.5	3459	18	42	-380	2	-8	multi-exon	FALSE	canonical	1	57674	junction_16	1591977.2325184774	NA	2	NA	TRUE	NA	NA	NA	C	coding	668	2007	547	2553	30.0	-3	True	AATAAA	-16
PB.7136.2	chr20	-	3501	6	novel_in_catalog	AL049650.1	novel	823	7	NA	NA	-18	-14610	no_combination_of_known_junctions	FALSE	canonical	1	10285	junction_5	34386.79411401999	NA	0	NA	TRUE	NA	NA	NA	B	coding	599	1800	363	2162	40.0	-11	True	AATAAA	-26
PB.635.2	chr1	-	4096	20	full-splice_match	CSDE1	ENST00000358528.8	4076	20	-20	0	-1	0	multi-exon	FALSE	canonical	1	483912	junction_15	1625555.3695188337	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	448	2844	25.0	-2	True	AATAAA	-24
PB.635.3	chr1	-	3708	19	full-splice_match	CSDE1	ENST00000534699.5	2667	19	-1	-1040	0	0	multi-exon	FALSE	canonical	1	94441	junction_18	1857962.9867552621	NA	9	1	TRUE	NA	NA	NA	C	coding	798	2397	60	2456	25.0	-1	True	AATAAA	-24
PB.8192.3	chr3	+	3318	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	-9	5464	-8	443	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	113	1942	30.0	-19	True	AATAAA	-18
PB.5519.8	chr18	-	2454	6	full-splice_match	CD226	ENST00000582621.5	1458	6	-28	-968	-28	-390	multi-exon	FALSE	canonical	1	100831	junction_5	31487.365431868067	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	476	1486	25.0	-9	True	AATAAA	-21
PB.635.8	chr1	-	3681	20	full-splice_match	CSDE1	ENST00000358528.8	4076	20	-20	415	-1	-20	multi-exon	FALSE	canonical	1	483912	junction_15	1625555.3695188337	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	448	2844	90.0	-2	True	NA	NA
PB.6089.2	chr19	-	4190	28	novel_in_catalog	SYMPK	novel	1603	10	NA	NA	0	5	combination_of_known_junctions	TRUE	canonical	1	10833	junction_27	199684.58317068976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1274	3825	249	4073	80.0	-19	True	AATAAA	-22
PB.1473.2	chr10	-	5224	8	novel_in_catalog	AC022400.3	novel	3810	19	NA	NA	-23	-40745	intron_retention	FALSE	canonical	1	15324	junction_7	31859.98650729309	NA	0	NA	TRUE	NA	NA	NA	B	coding	189	570	418	987	80.0	4	True	NA	NA
PB.1473.3	chr10	-	2424	8	novel_in_catalog	AC022400.3	novel	3810	19	NA	NA	-39	-41538	intron_retention	FALSE	canonical	1	4724	junction_1	36302.31742982134	NA	2	NA	TRUE	NA	NA	NA	B	coding	126	381	434	814	30.0	-12	True	AATAAA	-28
PB.1473.1	chr10	-	2018	13	novel_not_in_catalog	AC022400.3	novel	3810	19	NA	NA	-13801	-29994	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	34535.43694797418	NA	0	NA	TRUE	NA	NA	NA	B	coding	189	570	580	1149	15.0	-3	True	AATAAA	-13
PB.8192.1	chr3	+	4713	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	12	4048	12	1859	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	92	1921	15.0	2	True	NA	NA
PB.7976.4	chr3	+	1743	5	incomplete-splice_match	UBE2E1	ENST00000306627.7	1511	6	908	8	-278	-6	5prime_fragment	FALSE	canonical	1	1215010	junction_2	202238.88374441623	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	460	1041	35.0	-3643	False	AATAAA	-19
PB.11213.3	chr8	+	2719	16	incomplete-splice_match	LRRCC1	ENST00000360375.7	3813	19	59	7906	-9	0	3prime_fragment	FALSE	canonical	1	25916	junction_1	33890.47807760889	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2628	91	2718	80.0	-32	True	NA	NA
PB.10918.1	chr7	-	1795	1	novel_in_catalog	ATP6V0E2-AS1	novel	451	3	NA	NA	-47	-1800	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-24	False	NA	NA
PB.1550.2	chr10	+	5594	13	full-splice_match	TBC1D12	ENST00000225235.4	5272	13	-28	-294	-28	294	multi-exon	FALSE	canonical	1	31971	junction_1	16953.39327616713	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	139	2466	55.0	23	True	ATTAAA	-24
PB.1550.3	chr10	+	4585	6	novel_not_in_catalog	TBC1D12	novel	5272	13	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	39073.84730788613	NA	5	1	TRUE	NA	NA	NA	C	coding	402	1209	117	1325	35.0	-6	True	AATAAA	-15
PB.1550.1	chr10	+	5387	13	full-splice_match	TBC1D12	ENST00000225235.4	5272	13	-113	-2	-113	2	multi-exon	FALSE	canonical	1	31971	junction_1	16953.39327616713	NA	2	NA	TRUE	NA	NA	NA	C	coding	775	2328	224	2551	30.0	-185	False	AATAAA	-20
PB.9989.1	chr6	+	2366	7	novel_not_in_catalog	TAF8	novel	794	5	NA	NA	1	2022	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95271.71848761485	NA	3	NA	TRUE	NA	NA	NA	B	coding	184	555	20	574	50.0	-8	True	AATAAA	-19
PB.1550.4	chr10	+	3469	13	full-splice_match	TBC1D12	ENST00000225235.4	5272	13	-1	1804	-1	829	multi-exon	FALSE	canonical	1	31971	junction_1	16953.39327616713	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	112	2439	25.0	-1	True	AATAAA	-13
PB.9989.3	chr6	+	2100	9	novel_not_in_catalog	TAF8	novel	794	5	NA	NA	0	2025	any annotated donor/acceptor	FALSE	canonical	1	3544	junction_8	83369.02602585687	NA	2	NA	TRUE	NA	NA	NA	B	coding	319	960	19	978	55.0	-7	True	AATAAA	-22
PB.9440.16	chr5	+	2174	12	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	45	51437	45	-861	3prime_fragment	FALSE	canonical	1	187739	junction_1	82236.8762367197	NA	2	NA	TRUE	NA	NA	NA	C	coding	610	1830	343	2172	70.0	4	True	AATAAA	-9
PB.1166.16	chr1	-	4089	22	novel_in_catalog	PARP1	novel	3958	23	NA	NA	-11	291	intron_retention	FALSE	canonical	1	256970	junction_12	517973.09540198406	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	162	3305	20.0	-1	True	AATAAA	-16
PB.1989.1	chr11	-	1411	10	full-splice_match	EEF1G	ENST00000329251.4	1523	10	110	2	-3	0	multi-exon	FALSE	canonical	1	3351	junction_2	2313311.854121246	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	22	1335	10.0	2	True	ATTAAA	-16
PB.1989.2	chr11	-	1341	11	novel_not_in_catalog	EEF1G	novel	1523	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	1876512.26219608	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	19	963	10.0	5	True	ATTAAA	-16
PB.7927.7	chr3	+	1689	3	incomplete-splice_match	CRELD1	ENST00000452070.5	1778	11	2	8743	2	1170	3prime_fragment	FALSE	canonical	1	111000	junction_1	116531.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	86	261	94	354	20.0	-8	True	AATAAA	-17
PB.1346.1	chr10	-	2205	3	full-splice_match	WAC-AS1	ENST00000527986.5	2323	3	117	1	117	-1	multi-exon	FALSE	canonical	1	54717	junction_2	2664.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	668	985	20.0	-1	True	AATAAA	-22
PB.2075.1	chr11	+	2528	20	full-splice_match	SART1	ENST00000312397.9	3293	20	33	732	-6	7	multi-exon	FALSE	canonical	1	310111	junction_1	235557.438358249	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	60	2462	15.0	-12	True	AATAAA	-20
PB.1346.2	chr10	-	1656	3	novel_not_in_catalog	WAC-AS1	novel	2323	3	NA	NA	-8	-1308	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	27358.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	19	60	338	397	70.0	-49	True	NA	NA
PB.7927.4	chr3	+	2011	12	full-splice_match	CRELD1	ENST00000326434.9	1994	12	-22	5	-6	-5	multi-exon	FALSE	canonical	1	18391	junction_10	138616.8504266287	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	107	1375	35.0	-21	True	AATAAA	-18
PB.3322.4	chr14	-	4457	19	full-splice_match	ACIN1	ENST00000605057.5	4474	19	17	0	17	0	multi-exon	FALSE	canonical	1	194763	junction_15	414428.85091455444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1283	3852	25	3876	20.0	-1	True	AATAAA	-17
PB.7927.5	chr3	+	1818	11	full-splice_match	CRELD1	ENST00000452070.5	1778	11	-11	-29	-6	-4	multi-exon	FALSE	canonical	1	111000	junction_1	91338.91332263594	NA	1	1	TRUE	NA	NA	NA	C	coding	420	1263	107	1369	40.0	-21	True	AATAAA	-19
PB.8556.9	chr3	+	3481	15	novel_in_catalog	EIF2B5	novel	3038	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	11892	junction_5	164422.48684573444	NA	3	NA	TRUE	NA	NA	NA	C	coding	417	1254	1861	3114	10.0	3	True	ATTAAA	-15
PB.11213.9	chr8	+	3740	19	full-splice_match	LRRCC1	ENST00000360375.7	3813	19	72	1	4	-1	multi-exon	FALSE	canonical	1	25916	junction_1	38413.627065297136	NA	1	NA	TRUE	NA	NA	NA	C	coding	1032	3099	78	3176	25.0	-19	True	ATTAAA	-19
PB.3322.6	chr14	-	4135	13	novel_not_in_catalog	ACIN1	novel	2751	12	NA	NA	-19	0	intron_retention	FALSE	canonical	1	27503	junction_11	562841.9343057161	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	1968	3554	20.0	-20	True	AATAAA	-17
PB.8244.31	chr3	-	1652	1	novel_in_catalog	CGGBP1	novel	4495	3	NA	NA	40	281	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	59	False	NA	NA
PB.8244.30	chr3	-	1689	3	incomplete-splice_match	CGGBP1	ENST00000482016.5	1147	4	60	-11	40	11	intron_retention	FALSE	canonical	1	83901	junction_1	2290.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	1116	1619	20.0	59	False	ATTAAA	-24
PB.34.1	chr1	-	1805	7	novel_in_catalog	MORN1	novel	1798	14	NA	NA	8	475	combination_of_known_junctions	FALSE	canonical	1	8416	junction_1	32208.809586819567	NA	1	NA	TRUE	NA	NA	NA	A	coding	182	549	145	693	90.0	3377	False	NA	NA
PB.2350.10	chr11	+	3495	12	full-splice_match	PKNOX2	ENST00000532623.5	1654	12	1	-1842	1	-3	multi-exon	FALSE	canonical	1	684	junction_4	19584.060821186547	NA	7	2	TRUE	NA	NA	NA	C	coding	408	1227	275	1501	25.0	4	True	AGTAAA	-16
PB.11615.2	chr9	+	2064	9	full-splice_match	PSAT1	ENST00000376588.3	2188	9	-17	141	-17	-141	multi-exon	FALSE	canonical	1	200350	junction_2	96140.65168803465	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	86	1198	10.0	-1	True	ATTAAA	-26
PB.5044.12	chr17	-	4036	27	novel_in_catalog	EFTUD2	novel	4548	28	NA	NA	-45	0	intron_retention	FALSE	canonical	1	683139	junction_17	170895.55520601344	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	127	2649	5.0	8635	False	NA	NA
PB.5796.3	chr19	+	2144	8	full-splice_match	TPM4	ENST00000643579.1	2407	8	-8	271	-4	-267	multi-exon	FALSE	canonical	1	1814	junction_7	668384.2046523963	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	72	818	25.0	-8	True	AATAAA	-45
PB.8556.8	chr3	+	2462	15	novel_in_catalog	EIF2B5	novel	3038	15	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	859	junction_4	166801.2184018658	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	11	2095	10.0	-6	True	ATTAAA	-15
PB.5044.11	chr17	-	3253	27	full-splice_match	EFTUD2	ENST00000402521.7	3045	27	0	-208	0	4	multi-exon	FALSE	canonical	1	7112	junction_26	239346.74630849488	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	78	2891	0.0	-43	True	NA	NA
PB.5044.14	chr17	-	1997	15	incomplete-splice_match	EFTUD2	ENST00000426333.6	4548	28	247	13179	-12	-332	3prime_fragment	FALSE	canonical	1	683139	junction_5	116624.70552354712	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	52	1527	80.0	-13	True	NA	NA
PB.823.5	chr1	-	2052	5	novel_in_catalog	GLMP	novel	658	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	265221	junction_4	163892.1815134877	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	35	895	10.0	-8	True	AATAGA	-20
PB.3524.5	chr14	+	4531	9	full-splice_match	EXD2	ENST00000409018.7	3252	9	-10	-1269	-10	-393	multi-exon	FALSE	canonical	1	17454	junction_1	51849.81794191157	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	139	2004	10.0	-28	True	NA	NA
PB.3524.4	chr14	+	2895	8	full-splice_match	EXD2	ENST00000409675.5	2828	8	-68	1	-24	0	multi-exon	FALSE	canonical	1	5055	junction_1	58489.145395552165	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	148	1638	30.0	-42	True	AATAAA	-17
PB.3524.7	chr14	+	3335	10	novel_in_catalog	EXD2	novel	3252	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	54881	junction_1	45673.336355060266	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	214	2079	35.0	-19	True	AATAAA	-16
PB.3524.6	chr14	+	4609	10	novel_in_catalog	EXD2	novel	3252	9	NA	NA	-3	-392	combination_of_known_junctions	FALSE	canonical	1	54881	junction_1	45673.336355060266	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	216	2081	10.0	-21	True	NA	NA
PB.3524.1	chr14	+	3279	9	full-splice_match	EXD2	ENST00000409018.7	3252	9	-28	1	-28	0	multi-exon	FALSE	canonical	1	17454	junction_1	51849.81794191157	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	157	2022	30.0	-46	True	AATAAA	-17
PB.11448.5	chr9	-	2921	1	full-splice_match	RANBP6	ENST00000259569.5	4576	1	-6	1661	1	794	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	968	2904	18	2921	65.0	-10	True	NA	NA
PB.3524.3	chr14	+	4971	10	novel_in_catalog	EXD2	novel	3252	9	NA	NA	-26	-53	combination_of_known_junctions	FALSE	canonical	1	54881	junction_1	45673.336355060266	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	239	2104	80.0	-44	True	NA	NA
PB.3524.2	chr14	+	4888	9	full-splice_match	EXD2	ENST00000409018.7	3252	9	-27	-1609	-27	-53	multi-exon	FALSE	canonical	1	17454	junction_1	51849.81794191157	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	156	2021	80.0	-45	True	NA	NA
PB.10943.3	chr7	+	2118	12	novel_in_catalog	ACTR3B	novel	1566	10	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	1	13936	junction_2	70204.87061874726	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	432	1301	25.0	-5	True	AATAAA	-18
PB.10943.2	chr7	+	2182	10	novel_not_in_catalog	ACTR3B	novel	1566	10	NA	NA	1	-11318	any annotated donor/acceptor	FALSE	canonical	1	10765	junction_9	60920.69612533217	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	95	1066	30.0	-51	False	AATAAA	-18
PB.10943.1	chr7	+	2213	12	full-splice_match	ACTR3B	ENST00000256001.12	2216	12	3	0	3	0	multi-exon	FALSE	canonical	1	13936	junction_3	63663.67814870177	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	132	1388	5.0	0	True	AATAAA	-26
PB.3524.9	chr14	+	2984	9	novel_in_catalog	EXD2	novel	3252	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2702	junction_5	64146.24464261333	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	1102	1728	35.0	0	True	AATAAA	-16
PB.3524.8	chr14	+	3247	10	full-splice_match	EXD2	ENST00000492815.5	3243	10	-5	1	-5	0	multi-exon	FALSE	canonical	1	3953	junction_5	60653.75178425629	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	1014	1991	35.0	-5	True	AATAAA	-16
PB.8290.2	chr3	+	1484	5	full-splice_match	ABHD10	ENST00000273359.7	2590	5	-46	1152	-21	-60	multi-exon	FALSE	canonical	1	307531	junction_1	26646.364342767287	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	74	994	50.0	5	True	AATAAA	-24
PB.8290.1	chr3	+	2326	1	genic	ABHD10	novel	NA	NA	NA	NA	-24	-1010	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.473.9	chr1	+	5810	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-4	-4001	-4	3720	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	9	1	TRUE	NA	NA	NA	C	coding	405	1218	149	1366	45.0	0	True	AATAAA	-20
PB.2866.1	chr12	+	3444	12	novel_in_catalog	RIC8B	novel	5135	10	NA	NA	-32	-1	no_combination_of_known_junctions	FALSE	canonical	1	6919	junction_9	39394.85717075431	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	184	1767	15.0	-151	False	AATAAA	-16
PB.3322.9	chr14	-	3810	13	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	27503	junction_11	527976.0558652784	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	2660	3229	20.0	-4	True	AATAAA	-17
PB.2866.3	chr12	+	3076	9	novel_in_catalog	RIC8B	novel	5135	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	2455	junction_1	40990.96860876033	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	175	1809	15.0	-8	True	AATAAA	-17
PB.2866.2	chr12	+	2925	9	full-splice_match	RIC8B	ENST00000392839.6	2440	9	11	-496	11	0	multi-exon	FALSE	canonical	1	50004	junction_1	25530.541259134618	NA	3	NA	TRUE	NA	NA	NA	C	coding	520	1563	96	1658	15.0	-63	False	AATAAA	-17
PB.2866.5	chr12	+	5004	9	full-splice_match	RIC8B	ENST00000392839.6	2440	9	-43	-2521	2	-9	multi-exon	FALSE	canonical	1	50004	junction_1	25530.541259134618	NA	2	NA	TRUE	NA	NA	NA	C	coding	520	1563	150	1712	50.0	17	True	NA	NA
PB.2866.4	chr12	+	3013	10	full-splice_match	RIC8B	ENST00000392837.8	5135	10	88	2034	1	0	multi-exon	FALSE	canonical	1	27797	junction_9	30722.523496614012	NA	13	1	TRUE	NA	NA	NA	C	coding	560	1683	64	1746	15.0	-1	True	AATAAA	-17
PB.1334.2	chr10	+	2702	3	full-splice_match	THNSL1	ENST00000524413.5	3788	3	-55	1141	-55	-1141	multi-exon	FALSE	canonical	1	11663	junction_1	21330.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	403	2634	25.0	-22	True	AATAAA	-19
PB.1334.3	chr10	+	3824	3	full-splice_match	THNSL1	ENST00000524413.5	3788	3	-38	2	-38	-2	multi-exon	FALSE	canonical	1	11663	junction_1	21330.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	386	2617	35.0	-5	True	ATTAAA	-14
PB.1334.1	chr10	+	3752	3	full-splice_match	THNSL1	ENST00000376356.4	3691	3	-63	2	-63	-2	multi-exon	FALSE	canonical	1	30807	junction_1	11758.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	314	2545	35.0	-30	False	ATTAAA	-14
PB.2206.13	chr11	-	3375	18	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	56496	junction_2	394601.99139646447	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	284	2017	30.0	11	True	AATAAA	-14
PB.1334.4	chr10	+	3853	2	incomplete-splice_match	THNSL1	ENST00000376356.4	3691	3	-34	1139	-34	-1139	intron_retention	FALSE	canonical	1	30807	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	743	2232	1552	3783	20.0	-1	True	AATAAA	-21
PB.1334.5	chr10	+	2558	3	full-splice_match	THNSL1	ENST00000376356.4	3691	3	-8	1141	-8	-1141	multi-exon	FALSE	canonical	1	30807	junction_1	11758.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	259	2490	25.0	25	True	AATAAA	-19
PB.7885.3	chr22	-	6562	38	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	-42	0	intron_retention	FALSE	non_canonical	0	0	junction_35	457791.7753303663	NA	2	2	TRUE	NA	NA	NA	C	coding	1838	5517	321	5837	5.0	7199	False	AATACA	-18
PB.7885.2	chr22	-	6409	37	full-splice_match	PLXNB2	ENST00000359337.8	6335	37	-74	0	-19	0	multi-exon	FALSE	canonical	1	129958	junction_36	410250.5574955502	NA	1	1	TRUE	NA	NA	NA	C	coding	1838	5517	168	5684	5.0	-1	True	AATACA	-18
PB.7885.7	chr22	-	6349	36	novel_in_catalog	PLXNB2	novel	1916	8	NA	NA	-19	0	intron_retention	FALSE	canonical	1	61793	junction_35	399497.59753966494	NA	0	NA	TRUE	NA	NA	NA	C	coding	1838	5517	108	5624	5.0	-1	True	AATACA	-18
PB.7885.5	chr22	-	6456	38	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	-20	0	intron_retention	FALSE	canonical	1	83450	junction_37	436039.2715779485	NA	1	1	TRUE	NA	NA	NA	C	coding	1838	5517	215	5731	5.0	-2	True	AATACA	-18
PB.7885.9	chr22	-	6331	37	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	-19	0	intron_retention	FALSE	canonical	1	23644	junction_10	424837.3551581885	NA	0	NA	TRUE	NA	NA	NA	C	coding	1812	5439	168	5606	5.0	-1	True	AATACA	-18
PB.7885.8	chr22	-	6375	37	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	-5871	0	intron_retention	FALSE	canonical	0	0	junction_35	422665.87379462796	NA	37	3	TRUE	NA	NA	NA	C	coding	1838	5517	134	5650	5.0	9631	False	AATACA	-18
PB.10999.30	chr8	+	6633	41	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	45228	junction_25	245672.35051219643	NA	12	2	TRUE	NA	NA	NA	C	coding	2082	6249	292	6540	30.0	-5	True	AATAAA	-23
PB.6259.8	chr19	+	2786	4	novel_not_in_catalog	AC010522.1	novel	540	4	NA	NA	19519	9644	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	6919.822942500447	NA	7	NA	TRUE	NA	NA	NA	A	coding	574	1725	209	1933	75.0	-28	True	NA	NA
PB.6721.4	chr2	-	905	7	full-splice_match	NIFK	ENST00000285814.8	1734	7	18	811	6	-25	multi-exon	FALSE	canonical	1	168277	junction_4	166925.64904945955	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	849	56	904	60.0	21	False	AATACA	-27
PB.2562.18	chr12	-	5479	14	novel_in_catalog	SCAF11	novel	416	3	NA	NA	-20	-93	intron_retention	FALSE	canonical	1	286070	junction_11	101018.68578757359	NA	0	NA	TRUE	NA	NA	NA	C	coding	1433	4302	274	4575	60.0	1454	False	AATAAA	-11
PB.2562.19	chr12	-	4867	15	full-splice_match	SCAF11	ENST00000369367.7	7543	15	-71	2747	-52	170	multi-exon	FALSE	canonical	1	286070	junction_12	97789.69851593128	NA	0	NA	TRUE	NA	NA	NA	C	coding	1463	4392	306	4697	15.0	1422	False	AATAAA	-17
PB.6089.3	chr19	-	4135	27	novel_in_catalog	SYMPK	novel	1603	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10398	junction_26	170205.74792086717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1274	3825	199	4023	65.0	-19	True	AATAAA	-17
PB.6721.2	chr2	-	1584	7	full-splice_match	NIFK	ENST00000285814.8	1734	7	48	102	-3	-102	multi-exon	FALSE	canonical	1	168277	junction_4	166925.64904945955	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	26	907	20.0	-1	True	ATTAAA	-15
PB.2562.12	chr12	-	3148	16	novel_not_in_catalog	SCAF11	novel	416	3	NA	NA	2	246	any annotated donor/acceptor	FALSE	canonical	1	5752	junction_5	144099.1410003543	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	233	2263	65.0	0	True	NA	NA
PB.2562.13	chr12	-	3009	15	novel_not_in_catalog	SCAF11	novel	416	3	NA	NA	2	246	any annotated donor/acceptor	FALSE	canonical	1	2066	junction_4	135041.975991443	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	244	2124	65.0	-11	True	NA	NA
PB.2562.10	chr12	-	5635	15	novel_in_catalog	SCAF11	novel	416	3	NA	NA	2	409	combination_of_known_junctions	FALSE	canonical	1	17477	junction_2	137727.03120451033	NA	1	NA	TRUE	NA	NA	NA	C	coding	1447	4344	244	4587	90.0	-11	True	NA	NA
PB.8781.1	chr4	+	5164	21	full-splice_match	KIT	ENST00000412167.6	3470	21	8	-1702	8	-2	multi-exon	FALSE	canonical	1	81318	junction_1	23589.107938357905	NA	1	1	TRUE	NA	NA	NA	C	coding	972	2919	90	3008	25.0	-6979	False	AATAAA	-18
PB.2562.17	chr12	-	2876	16	novel_not_in_catalog	SCAF11	novel	416	3	NA	NA	-44	-91	any annotated donor/acceptor	FALSE	canonical	1	5752	junction_5	144099.1410003543	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	298	2328	60.0	1430	False	AATAAA	-13
PB.2562.14	chr12	-	5572	15	full-splice_match	SCAF11	ENST00000369367.7	7543	15	-61	2032	-42	246	multi-exon	FALSE	canonical	1	286070	junction_12	97789.69851593128	NA	0	NA	TRUE	NA	NA	NA	C	coding	1463	4392	296	4687	65.0	1432	False	NA	NA
PB.2562.15	chr12	-	5186	15	full-splice_match	SCAF11	ENST00000369367.7	7543	15	-12	2369	-1	-91	multi-exon	FALSE	canonical	1	286070	junction_12	97789.69851593128	NA	0	NA	TRUE	NA	NA	NA	C	coding	1463	4392	247	4638	60.0	-14	True	AATAAA	-13
PB.10719.1	chr7	+	1472	6	full-splice_match	CNPY4	ENST00000262932.4	1502	6	21	9	21	-9	multi-exon	FALSE	canonical	1	153396	junction_4	15998.078917170025	NA	0	NA	TRUE	NA	NA	NA	A	coding	226	681	178	858	40.0	-45	True	ATTAAA	-17
PB.7728.14	chr22	+	1857	6	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	6	-2468	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	741648.5416493717	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	222	659	15.0	2	True	ATTAAA	-22
PB.7728.13	chr22	+	4210	5	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	6	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	825461.1390266957	NA	3	NA	TRUE	NA	NA	NA	C	coding	145	438	110	547	10.0	2	True	AGTAAA	-20
PB.7728.12	chr22	+	2248	6	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	4	-2468	any annotated donor/acceptor	FALSE	canonical	1	2208	junction_2	922736.3164212406	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	298	1050	15.0	0	True	ATTAAA	-22
PB.7728.11	chr22	+	2269	6	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	4	-2083	any annotated donor/acceptor	FALSE	canonical	1	1846	junction_1	740975.0315508883	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	249	686	50.0	0	True	AATAAA	-23
PB.7728.10	chr22	+	2778	4	novel_in_catalog	TIMP3	novel	4603	5	NA	NA	4	-2477	intron_retention	FALSE	canonical	1	1212590	junction_1	336550.4590779153	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	298	630	25.0	0	True	ATTAAA	-13
PB.1219.51	chr1	-	1744	3	incomplete-splice_match	LYST	ENST00000465349.5	5220	12	411	37241	387	-9	3prime_fragment	FALSE	canonical	1	9706	junction_2	99727.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	582	False	AATAAA	-13
PB.473.5	chr1	+	2385	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-23	-557	-23	276	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	168	1385	40.0	-19	True	AATAAA	-27
PB.1742.11	chr11	-	1762	10	novel_not_in_catalog	RNH1	novel	2973	9	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	624708.4047616156	NA	16	1	TRUE	NA	NA	NA	C	coding	461	1386	202	1587	15.0	0	True	ATTAAA	-14
PB.4631.1	chr16	+	3509	12	novel_in_catalog	DEF8	novel	4450	13	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	49237	junction_5	151542.87142674992	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	51	1406	10.0	-4	True	ATTAAA	-20
PB.1742.13	chr11	-	2419	9	novel_in_catalog	RNH1	novel	2973	9	NA	NA	12	-1	intron_retention	FALSE	canonical	1	317096	junction_8	559713.3606733311	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	1589	2245	15.0	-10	True	ATTAAA	-13
PB.1742.12	chr11	-	2525	10	novel_in_catalog	RNH1	novel	2973	9	NA	NA	11	-1	intron_retention	FALSE	canonical	1	63097	junction_9	714611.0531502736	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1695	2351	15.0	-11	True	ATTAAA	-13
PB.473.6	chr1	+	2064	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-40	-219	14	-62	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	185	1402	55.0	18	True	NA	NA
PB.473.7	chr1	+	2619	13	novel_not_in_catalog	CTH	novel	2044	11	NA	NA	15	5683	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	46356.524050843036	NA	3	NA	TRUE	NA	NA	NA	C	coding	405	1218	184	1401	20.0	19	True	AATAAA	-13
PB.3609.4	chr14	-	2767	8	novel_in_catalog	FOXN3	novel	513	3	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	1	29723	junction_7	62517.08253863785	NA	2	1	TRUE	NA	NA	NA	B	coding	486	1461	293	1753	85.0	-26	True	NA	NA
PB.7042.1	chr2	-	3950	13	novel_not_in_catalog	WDFY1	novel	361	2	NA	NA	-1	8452	intron_retention	FALSE	canonical	1	7436	junction_1	141003.041061448	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	53	634	25.0	-2	True	NA	NA
PB.9832.13	chr6	+	5472	3	incomplete-splice_match	HLA-F	ENST00000484704.5	1201	4	-727	-3097	3	272	intron_retention	FALSE	canonical	1	1590592	junction_2	10653.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	215	648	779	1426	80.0	-4	True	NA	NA
PB.7042.2	chr2	-	1834	14	novel_not_in_catalog	WDFY1	novel	361	2	NA	NA	0	8449	any annotated donor/acceptor	FALSE	canonical	1	7436	junction_1	135793.0843325838	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	52	1284	20.0	-1	True	NA	NA
PB.962.8	chr1	+	5641	17	novel_not_in_catalog	SOAT1	novel	6861	15	NA	NA	-35	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	112848.78084957044	NA	4	2	TRUE	NA	NA	NA	C	coding	550	1653	179	1831	25.0	-2236	False	ATTAAA	-16
PB.4415.1	chr16	-	3072	7	full-splice_match	N4BP1	ENST00000262384.3	7106	7	212	3822	212	332	multi-exon	FALSE	canonical	1	123844	junction_6	62556.24132197629	NA	0	NA	TRUE	NA	NA	NA	A	coding	896	2691	26	2716	80.0	-12	True	NA	NA
PB.8735.12	chr4	-	3030	6	novel_not_in_catalog	TLR1	novel	619	4	NA	NA	-135	9	any annotated donor/acceptor	FALSE	canonical	1	140	junction_5	28215.09477283392	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	473	2833	45.0	26	False	ATTAAA	-29
PB.11650.12	chr9	-	2908	6	novel_in_catalog	ZNF484	novel	3960	4	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	6672	junction_4	23473.814462928687	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	300	2750	10.0	13	True	AGTAAA	-15
PB.1740.13	chr11	-	3106	24	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	7905	junction_9	42222.026438738976	NA	3	1	TRUE	NA	NA	NA	C	coding	491	1476	80	1555	0.0	-33	True	AGTAAA	-12
PB.1740.12	chr11	-	3145	22	novel_not_in_catalog	ANO9	novel	2868	11	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	12933	junction_18	38358.30397107535	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	107	2713	0.0	8121	False	AGTAAA	-12
PB.7891.1	chr22	+	3358	20	full-splice_match	NCAPH2	ENST00000420993.6	2037	20	8	-1329	8	1329	multi-exon	FALSE	canonical	1	326962	junction_9	107550.839656637	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	115	1932	35.0	-23	True	AATAAA	-39
PB.7891.2	chr22	+	2028	20	full-splice_match	NCAPH2	ENST00000420993.6	2037	20	8	1	8	0	multi-exon	TRUE	canonical	1	326962	junction_9	107550.839656637	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	115	1932	30.0	-23	True	AATAAA	-17
PB.7891.3	chr22	+	3668	19	novel_in_catalog	NCAPH2	novel	2037	20	NA	NA	12	0	intron_retention	FALSE	canonical	1	396097	junction_1	95892.20134907211	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	2640	3572	30.0	-19	True	AATAAA	-17
PB.8735.11	chr4	-	3417	4	novel_not_in_catalog	TLR1	novel	619	4	NA	NA	-162	9	any annotated donor/acceptor	FALSE	canonical	1	1471	junction_3	19062.445336897945	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	860	3220	45.0	-1	True	ATTAAA	-29
PB.10183.3	chr6	-	4512	8	full-splice_match	GOPC	ENST00000052569.10	4590	8	23	55	23	-52	multi-exon	FALSE	canonical	1	265041	junction_6	34148.87864654309	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	218	1582	40.0	-14	True	AATAAA	-19
PB.8116.2	chr3	+	5497	4	novel_in_catalog	DAG1	novel	5576	3	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	2737	junction_1	237509.19140857592	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	402	3083	20.0	-14	True	AATAAA	-18
PB.3326.1	chr14	-	2187	2	novel_in_catalog	PPP1R3E	novel	4773	5	NA	NA	410	-1364	intron_retention	TRUE	canonical	1	11702	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	233	702	1	702	95.0	-13	True	AATGAA	-34
PB.8735.16	chr4	-	4137	3	full-splice_match	TLR1	ENST00000502213.6	2779	3	-1364	6	-162	-6	multi-exon	FALSE	canonical	1	41668	junction_2	1656.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	1595	3955	45.0	-1	True	ATTAAA	-14
PB.9440.11	chr5	+	2912	12	novel_in_catalog	AC116366.3	novel	7893	27	NA	NA	107317	-52553	no_combination_of_known_junctions	FALSE	canonical	1	22733	junction_11	120273.60729060309	NA	0	NA	TRUE	NA	NA	NA	B	coding	659	1980	357	2336	25.0	-10	True	ATTAAA	-20
PB.5938.1	chr19	+	2409	17	novel_in_catalog	APLP1	novel	2266	17	NA	NA	-27	5	combination_of_known_junctions	FALSE	canonical	1	210229	junction_1	221996.3458118455	NA	0	NA	TRUE	NA	NA	NA	A	coding	650	1953	102	2054	15.0	-40	True	AATAAA	-21
PB.1644.2	chr10	+	4087	14	full-splice_match	ADD3	ENST00000277900.12	4337	14	243	7	-1	-7	multi-exon	FALSE	canonical	1	298485	junction_13	180363.11254691042	NA	2	NA	TRUE	NA	NA	NA	C	coding	674	2025	123	2147	40.0	3	True	AATAAA	-10
PB.1644.3	chr10	+	2153	15	full-splice_match	ADD3	ENST00000356080.8	3081	15	267	661	-2	202	multi-exon	FALSE	canonical	1	352476	junction_1	163137.74439136407	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2052	101	2152	50.0	-2	True	NA	NA
PB.5660.2	chr19	+	3193	9	novel_not_in_catalog	ZNF557	novel	2268	8	NA	NA	-21	-1738	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	28632.20463372494	NA	4	1	TRUE	NA	NA	NA	C	coding	423	1272	262	1533	80.0	-24	True	NA	NA
PB.1644.1	chr10	+	1898	11	incomplete-splice_match	ADD3	ENST00000356080.8	3081	15	-24	8280	-24	1763	3prime_fragment	FALSE	canonical	1	352476	junction_1	134501.2565471416	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1506	392	1897	65.0	-981	False	TTTAAA	-24
PB.1644.6	chr10	+	2168	14	incomplete-splice_match	ADD3	ENST00000356080.8	3081	15	15	1823	13	-339	3prime_fragment	FALSE	canonical	1	352476	junction_1	161692.23946752568	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1815	353	2167	55.0	-7	True	NA	NA
PB.1644.7	chr10	+	2835	14	full-splice_match	ADD3	ENST00000277900.12	4337	14	267	1235	0	0	multi-exon	FALSE	canonical	1	298485	junction_13	180363.11254691042	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	99	2123	85.0	0	True	NA	NA
PB.1644.4	chr10	+	2951	15	full-splice_match	ADD3	ENST00000356080.8	3081	15	249	-119	2	0	multi-exon	FALSE	canonical	1	352476	junction_1	163137.74439136407	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	119	2239	85.0	7	True	NA	NA
PB.1644.5	chr10	+	3012	16	novel_in_catalog	ADD3	novel	697	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6358	junction_1	258084.21010294725	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	180	2300	85.0	4	True	NA	NA
PB.10777.4	chr7	+	2557	7	novel_in_catalog	DUS4L	novel	491	3	NA	NA	2	-39	intron_retention	FALSE	canonical	1	82740	junction_4	21810.141180958304	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	739	1692	25.0	-28	True	AATAAA	-22
PB.8116.7	chr3	+	5376	3	full-splice_match	DAG1	ENST00000308775.6	5522	3	145	1	0	-1	multi-exon	FALSE	canonical	1	147234	junction_1	181713.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	280	2961	15.0	-12	True	AATAAA	-19
PB.1644.8	chr10	+	4212	15	full-splice_match	ADD3	ENST00000356080.8	3081	15	226	-1357	-20	3	multi-exon	FALSE	canonical	1	352476	junction_1	163137.74439136407	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	142	2262	20.0	6	True	AATAAA	-20
PB.1644.9	chr10	+	3556	13	novel_in_catalog	ADD3	novel	697	6	NA	NA	20	0	intron_retention	FALSE	canonical	1	298485	junction_12	185364.1603189329	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	1546	2844	85.0	0	True	NA	NA
PB.10705.3	chr7	-	1607	2	full-splice_match	FAM200A	ENST00000449309.1	2480	2	20	853	20	-360	multi-exon	FALSE	canonical	1	69670	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1245	361	1605	70.0	-1	True	NA	NA
PB.10705.2	chr7	-	1886	2	full-splice_match	FAM200A	ENST00000449309.1	2480	2	20	574	20	-81	multi-exon	FALSE	canonical	1	69670	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1524	361	1884	40.0	-1	True	NA	NA
PB.10705.1	chr7	-	2481	2	full-splice_match	FAM200A	ENST00000449309.1	2480	2	21	-22	21	22	multi-exon	FALSE	canonical	1	69670	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	360	2081	35.0	0	True	NA	NA
PB.5643.8	chr19	-	2813	13	novel_in_catalog	RANBP3	novel	3186	17	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	7773	junction_12	221788.18666922013	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	28	1347	25.0	-17	True	ATTAAA	-9
PB.10016.11	chr6	-	2889	1	novel_in_catalog	SLC35B2	novel	1859	3	NA	NA	357	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	299	900	1391	2290	10.0	8632	False	ATTAAA	-13
PB.11008.8	chr8	-	5543	4	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	20	-5	intron_retention	FALSE	canonical	1	1167	junction_2	16934.514125497273	NA	9	NA	TRUE	NA	NA	NA	C	coding	550	1653	339	1991	20.0	-2	True	AATAAA	-20
PB.11008.9	chr8	-	5388	5	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	6	-5	intron_retention	FALSE	canonical	1	529	junction_1	17167.36798405626	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	353	2143	20.0	5	True	AATAAA	-20
PB.9481.4	chr5	+	3423	18	full-splice_match	CTNNA1	ENST00000302763.11	3756	18	10	323	2	-120	multi-exon	FALSE	canonical	1	840118	junction_11	372950.4219883763	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	81	2801	30.0	8	True	AATAAA	-17
PB.195.1	chr1	-	2539	13	full-splice_match	UBXN11	ENST00000475591.5	2542	13	1	2	1	0	multi-exon	TRUE	canonical	1	99141	junction_12	134902.47331488115	NA	2	NA	TRUE	NA	NA	NA	C	coding	291	876	80	955	15.0	0	True	AATAAA	-15
PB.11008.4	chr8	-	5684	4	full-splice_match	LZTS1	ENST00000381569.5	5706	4	21	1	21	-1	multi-exon	FALSE	canonical	1	23792	junction_3	8725.924834779533	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	338	2128	20.0	-1	True	AATAAA	-24
PB.11008.3	chr8	-	3986	5	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	-5	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	17373.338170527273	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	364	2154	20.0	-6	True	AATAAA	-24
PB.11275.22	chr8	-	2542	5	full-splice_match	YWHAZ	ENST00000521309.5	1399	5	0	-1143	0	0	multi-exon	FALSE	canonical	1	8838	junction_4	885995.4492745716	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	158	535	20.0	0	True	NA	NA
PB.5647.1	chr19	-	2189	14	novel_not_in_catalog	PSPN	novel	471	2	NA	NA	-14107	0	any annotated donor/acceptor	FALSE	canonical	1	3411	junction_1	299077.8984735598	NA	1	NA	TRUE	NA	NA	NA	A	coding	603	1812	171	1982	15.0	-2	True	AATAAA	-19
PB.5647.3	chr19	-	2268	13	full-splice_match	GTF2F1	ENST00000394456.9	2731	13	275	188	20	121	multi-exon	FALSE	canonical	1	720119	junction_8	172815.6721357848	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	191	1744	80.0	-2	True	NA	NA
PB.5647.2	chr19	-	2431	13	full-splice_match	GTF2F1	ENST00000394456.9	2731	13	274	26	19	-26	multi-exon	FALSE	canonical	1	720119	junction_8	172815.6721357848	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	192	1745	75.0	-3	True	NA	NA
PB.740.1	chr1	-	2462	3	full-splice_match	LYSMD1	ENST00000368908.9	2479	3	17	0	17	0	multi-exon	FALSE	canonical	1	90047	junction_1	691.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	227	684	645	1328	20.0	-8	True	ATTAAA	-17
PB.5647.4	chr19	-	1781	13	full-splice_match	GTF2F1	ENST00000394456.9	2731	13	268	682	13	-61	multi-exon	FALSE	canonical	1	720119	junction_8	172815.6721357848	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	198	1751	30.0	-9	True	AATACA	-15
PB.5643.4	chr19	-	2800	13	novel_in_catalog	RANBP3	novel	3186	17	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	7773	junction_12	226735.23325198784	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	29	1333	25.0	-18	True	ATTAAA	-10
PB.9449.1	chr5	-	2173	4	novel_not_in_catalog	C5orf15	novel	2358	3	NA	NA	-26	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	234178.32909463585	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	409	816	5.0	87	False	AATAAA	-28
PB.9449.2	chr5	-	2115	3	novel_in_catalog	C5orf15	novel	2358	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	22222	junction_2	187765.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	352	759	10.0	-1	True	AATAAA	-27
PB.9449.5	chr5	-	2239	4	novel_in_catalog	C5orf15	novel	2358	3	NA	NA	15	-6	combination_of_known_junctions	FALSE	canonical	1	2700	junction_3	185764.8383599245	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	481	888	15.0	14	True	AATAAA	-22
PB.5643.7	chr19	-	2985	16	full-splice_match	RANBP3	ENST00000034275.12	1762	16	-15	-1208	-4	-5	multi-exon	FALSE	canonical	1	242747	junction_15	174179.02931133818	NA	20	1	TRUE	NA	NA	NA	C	coding	499	1500	20	1519	25.0	-9	True	ATTAAA	-9
PB.9449.6	chr5	-	2081	3	novel_not_in_catalog	C5orf15	novel	2358	3	NA	NA	263	-6	any annotated donor/acceptor	FALSE	canonical	1	3026	junction_2	197363.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	323	730	15.0	425	False	AATAAA	-22
PB.9548.9	chr5	+	4182	23	novel_in_catalog	FBXO38	novel	3680	21	NA	NA	8	-266	combination_of_known_junctions	FALSE	canonical	1	3581	junction_3	75193.92910474008	NA	0	NA	TRUE	NA	NA	NA	C	coding	1138	3417	352	3768	0.0	2	True	AGTAAA	-15
PB.4409.7	chr16	-	1774	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	117	1231	-7	29	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	100	1338	30.0	-1	True	AATAAA	-16
PB.4409.4	chr16	-	2251	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	111	760	-13	500	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	106	1344	60.0	-7	True	NA	NA
PB.4409.5	chr16	-	1987	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	114	1021	-10	239	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	103	1341	15.0	-4	True	AATAAA	-19
PB.4409.2	chr16	-	2866	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	108	148	-16	-148	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	109	1347	60.0	-10	True	TTTAAA	-33
PB.4409.3	chr16	-	2459	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	114	549	-10	-549	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	103	1341	30.0	-4	True	AATGAA	-9
PB.6497.26	chr2	+	4591	23	novel_not_in_catalog	EHBP1	novel	4108	23	NA	NA	30176	-3	intron_retention	FALSE	canonical	1	519	junction_1	96553.89516116575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	377	3607	25.0	-67	False	AATAAA	-21
PB.4409.1	chr16	-	3014	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	108	0	-16	0	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	109	1347	10.0	-10	True	AATAAA	-17
PB.5111.3	chr17	+	2476	9	full-splice_match	RSAD1	ENST00000258955.6	2528	9	52	0	-8	0	multi-exon	FALSE	canonical	1	143948	junction_1	66327.14256575132	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	34	1362	5.0	-8	True	AATAAA	-17
PB.5111.2	chr17	+	2917	7	novel_in_catalog	RSAD1	novel	2528	9	NA	NA	-30	3	intron_retention	FALSE	canonical	1	143948	junction_1	75941.19043926908	NA	7	1	TRUE	NA	NA	NA	C	coding	351	1056	56	1111	5.0	2	True	AATAAA	-20
PB.5111.1	chr17	+	2729	8	novel_in_catalog	RSAD1	novel	2528	9	NA	NA	21	4	intron_retention	FALSE	canonical	1	143948	junction_1	70814.43391551972	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	65	1120	10.0	-7	True	AATAAA	-21
PB.9548.2	chr5	+	3440	21	full-splice_match	FBXO38	ENST00000296701.10	3680	21	23	217	6	-217	multi-exon	FALSE	canonical	1	48980	junction_14	58064.42381915108	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	146	2977	35.0	0	True	ATTAAA	-16
PB.9548.5	chr5	+	4178	22	full-splice_match	FBXO38	ENST00000394370.7	4132	22	-45	-1	5	1	multi-exon	FALSE	canonical	1	60307	junction_15	55427.65601727319	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	147	3488	15.0	-1	True	AATAAA	-19
PB.9548.4	chr5	+	4275	22	novel_not_in_catalog	FBXO38	novel	3680	21	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	11781	junction_15	62179.28933509684	NA	1	NA	TRUE	NA	NA	NA	C	coding	1146	3441	147	3587	10.0	-1	True	AATAAA	-17
PB.5111.5	chr17	+	2267	8	full-splice_match	RSAD1	ENST00000504284.1	1064	8	-47	-1156	-4	0	multi-exon	FALSE	canonical	1	5898	junction_2	114791.26836131744	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	413	1153	5.0	-4	True	AATAAA	-17
PB.4409.9	chr16	-	1593	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	91	1438	-33	-178	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	126	1364	40.0	-27	True	AATAAA	-13
PB.10777.6	chr7	+	2198	8	novel_in_catalog	DUS4L	novel	491	3	NA	NA	-9	-47	combination_of_known_junctions	FALSE	canonical	1	16840	junction_1	36708.90033710058	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	388	1341	25.0	-17	True	AATAAA	-14
PB.5643.3	chr19	-	2980	16	full-splice_match	RANBP3	ENST00000591092.5	1783	16	-18	-1179	2	-5	multi-exon	FALSE	canonical	1	235425	junction_9	179007.78904550496	NA	1	1	TRUE	NA	NA	NA	C	coding	494	1485	30	1514	25.0	-19	True	ATTAAA	-9
PB.6943.5	chr2	+	3949	8	full-splice_match	CASP10	ENST00000346817.9	3926	8	-28	5	0	-5	multi-exon	FALSE	canonical	1	12010	junction_5	26528.01626313477	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	176	1615	50.0	0	True	AGTAAA	-10
PB.5643.2	chr19	-	3184	17	full-splice_match	RANBP3	ENST00000439268.6	3186	17	-2	4	-2	-4	multi-exon	FALSE	canonical	1	35628	junction_14	236604.28828184702	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	29	1717	25.0	-18	True	ATTAAA	-10
PB.6943.3	chr2	+	4025	10	novel_not_in_catalog	CASP10	novel	5928	10	NA	NA	0	-84	any annotated donor/acceptor	FALSE	canonical	1	11928	junction_5	25371.56111344616	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	205	1770	40.0	0	True	CATAAA	-18
PB.6943.2	chr2	+	3143	10	full-splice_match	CASP10	ENST00000286186.10	5928	10	227	2558	-4	-973	multi-exon	FALSE	canonical	1	41212	junction_5	19493.763727072143	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	209	1777	65.0	-4	True	NA	NA
PB.6943.1	chr2	+	4150	10	full-splice_match	CASP10	ENST00000286186.10	5928	10	215	1563	-16	22	multi-exon	FALSE	canonical	1	41212	junction_5	19493.763727072143	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	221	1789	15.0	-45	False	AGTAAA	-37
PB.1635.10	chr10	-	1829	4	novel_not_in_catalog	CALHM2	novel	1843	4	NA	NA	-6	-4	any annotated donor/acceptor	FALSE	canonical	1	30416	junction_1	53514.78856249821	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	512	1102	30.0	-1	True	GATAAA	-13
PB.6595.4	chr2	-	2566	15	full-splice_match	GGCX	ENST00000233838.8	7569	15	-13	5016	10	91	multi-exon	FALSE	canonical	1	192063	junction_2	35616.41594826745	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	95	2371	45.0	-3	True	AATAAA	-22
PB.7485.14	chr21	+	5567	5	novel_in_catalog	BACH1	novel	325	2	NA	NA	-61	-162	combination_of_known_junctions	FALSE	canonical	1	6642	junction_1	154301.12710439772	NA	6	NA	TRUE	NA	NA	NA	C	coding	736	2211	204	2414	30.0	-1156	False	AATAAA	-21
PB.7485.13	chr21	+	5616	5	full-splice_match	BACH1	ENST00000399921.5	5769	5	-8	161	-8	-161	multi-exon	FALSE	canonical	1	46060	junction_1	137475.8586304792	NA	3	NA	TRUE	NA	NA	NA	C	coding	736	2211	252	2462	25.0	0	True	AATAAA	-22
PB.7485.12	chr21	+	5780	5	full-splice_match	BACH1	ENST00000399921.5	5769	5	-14	3	-14	-3	multi-exon	FALSE	canonical	1	46060	junction_1	137475.8586304792	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	258	2468	40.0	-6	True	AATAAA	-24
PB.7485.11	chr21	+	3913	3	novel_in_catalog	BACH1	novel	325	2	NA	NA	51	-163	no_combination_of_known_junctions	FALSE	canonical	1	965	junction_2	59657.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	222	669	93	761	30.0	0	True	AATAAA	-20
PB.7485.10	chr21	+	2302	5	full-splice_match	BACH1	ENST00000286800.7	5669	5	50	3317	50	-3317	multi-exon	FALSE	canonical	1	120279	junction_1	106007.32492733697	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2208	94	2301	25.0	-1	True	GATAAA	-17
PB.2637.15	chr12	+	1675	15	full-splice_match	PCBP2	ENST00000359462.9	1814	15	142	-3	-54	3	multi-exon	FALSE	non_canonical	0	0	junction_7	1981267.650566395	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	182	1282	10.0	-8775	False	AATAGA	-21
PB.4598.20	chr16	-	2382	11	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-19	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	772052.1775295049	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	86	1609	10.0	-3	True	AAGAAA	-15
PB.12390.14	chrY	+	4193	1	full-splice_match	TXLNGY	ENST00000593000.1	1074	1	-1128	-1991	-490	1991	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	114	345	1356	1700	70.0	4559	False	NA	NA
PB.12390.13	chrY	+	1825	3	novel_in_catalog	TXLNGY	novel	1000	5	NA	NA	75	1	intron_retention	FALSE	canonical	1	9376	junction_1	36794.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	64	459	30.0	0	True	AATAAA	-15
PB.12390.12	chrY	+	1969	4	novel_in_catalog	TXLNGY	novel	1000	5	NA	NA	33	1	intron_retention	FALSE	canonical	1	9376	junction_1	30528.808241833918	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	106	501	15.0	23	True	AATAAA	-17
PB.12390.11	chrY	+	2450	3	novel_in_catalog	TXLNGY	novel	1000	5	NA	NA	11	-9	intron_retention	FALSE	canonical	1	9376	junction_1	36794.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	128	523	45.0	1	True	AATAAA	-6
PB.12390.10	chrY	+	3408	2	incomplete-splice_match	TXLNGY	ENST00000459719.6	2098	4	26	-4	-6	-1	intron_retention	FALSE	canonical	1	56118	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	211	633	15.0	18	True	AATAAA	-19
PB.8075.7	chr3	-	4472	2	novel_not_in_catalog	SETD2	novel	7555	19	NA	NA	11	292	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	B	coding	1437	4311	160	4470	50.0	-16	True	AAGAAA	-11
PB.2637.19	chr12	+	1773	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10360	12286	no_combination_of_known_junctions	FALSE	canonical	1	457962	junction_3	1626219.9008190744	NA	1	NA	TRUE	NA	NA	NA	B	coding	349	1050	352	1401	35.0	-1	True	ATTAAA	-32
PB.4598.22	chr16	-	4117	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	10082	-2	any annotated donor/acceptor	FALSE	canonical	1	470	junction_9	797119.2444238747	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	447	1172	10.0	7150	False	AAGAAA	-14
PB.11536.5	chr9	-	3278	13	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	23	-29	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62445.841619569735	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	199	2367	70.0	2	True	NA	NA
PB.11032.5	chr8	-	3800	9	full-splice_match	TNFRSF10B	ENST00000523504.5	1464	9	0	-2336	0	-5	multi-exon	FALSE	canonical	1	8760	junction_8	254573.3156913925	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	485	1267	30.0	-1	True	ATTAAA	-16
PB.11032.4	chr8	-	3919	10	novel_not_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	-1	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	228426.7126172224	NA	36	3	TRUE	NA	NA	NA	C	coding	415	1248	139	1386	30.0	-2	True	ATTAAA	-16
PB.11032.7	chr8	-	6035	6	novel_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	-4	-5	intron_retention	FALSE	canonical	1	451236	junction_4	108853.20939944766	NA	7	NA	TRUE	NA	NA	NA	C	coding	152	459	3044	3502	30.0	4	True	ATTAAA	-16
PB.4598.23	chr16	-	4058	5	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-19	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	715516.9458814375	NA	4	1	TRUE	NA	NA	NA	C	coding	249	750	86	835	10.0	-3	True	AAGAAA	-14
PB.11032.1	chr8	-	4429	8	novel_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	451236	junction_6	106270.66502750303	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	1435	1893	15.0	-1	True	ATTAAA	-19
PB.6589.8	chr2	-	4986	5	full-splice_match	TGOLN2	ENST00000398263.6	6138	5	-18	1170	-18	-1170	multi-exon	FALSE	canonical	1	156723	junction_3	212518.3310568467	NA	19	NA	TRUE	NA	NA	NA	C	coding	379	1140	308	1447	95.0	9	True	NA	NA
PB.11032.3	chr8	-	3896	10	full-splice_match	TNFRSF10B	ENST00000347739.3	1723	10	-1	-2172	0	-6	multi-exon	FALSE	canonical	1	274127	junction_5	155011.8542055636	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	129	1364	30.0	8	True	ATTAAA	-15
PB.10092.39	chr6	-	2193	11	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-28605	-56559	no_combination_of_known_junctions	FALSE	canonical	1	28014	junction_10	367482.08023009775	NA	0	NA	TRUE	NA	NA	NA	B	coding	623	1872	103	1974	50.0	27	True	AATAAA	-17
PB.5657.2	chr19	-	2419	10	full-splice_match	SH2D3A	ENST00000245908.10	2296	10	7	-130	7	-3	multi-exon	FALSE	canonical	1	56332	junction_4	25942.554082452785	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	264	1994	30.0	-71	False	TTTAAA	-3
PB.4974.3	chr17	+	2337	4	full-splice_match	EIF1	ENST00000469257.1	2330	4	-8	1	0	-1	multi-exon	FALSE	canonical	1	2585693	junction_1	2665719.8567811954	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	155	496	10.0	-2	True	NA	NA
PB.6589.7	chr2	-	4809	4	novel_not_in_catalog	TGOLN2	novel	6419	5	NA	NA	-4	-1170	intron_retention	FALSE	canonical	1	13896	junction_1	306310.5283597023	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	28	1341	95.0	-1	True	NA	NA
PB.5657.1	chr19	-	2390	9	novel_in_catalog	SH2D3A	novel	512	3	NA	NA	-24	-25	intron_retention	FALSE	canonical	1	56332	junction_3	26637.559435644624	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	170	1987	70.0	-2	True	NA	NA
PB.6589.1	chr2	-	5238	4	novel_not_in_catalog	TGOLN2	novel	6419	5	NA	NA	-2	6352	intron_retention	FALSE	canonical	1	499	junction_1	312460.2991574378	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	26	1468	20.0	1	True	NA	NA
PB.6589.3	chr2	-	6075	4	full-splice_match	TGOLN2	ENST00000377386.7	6489	4	409	5	8	-2	multi-exon	FALSE	canonical	1	560082	junction_3	78492.03061599453	NA	5	NA	TRUE	NA	NA	NA	C	coding	437	1314	55	1368	40.0	5777	False	AATAAA	-18
PB.8228.2	chr3	-	2613	5	novel_in_catalog	LINC00877	novel	2506	7	NA	NA	-3	5272	intron_retention	FALSE	canonical	1	10012	junction_3	6183.247907653388	NA	4	NA	TRUE	NA	NA	NA	B	coding	175	528	1400	1927	85.0	-13	True	NA	NA
PB.2751.4	chr12	+	5637	12	novel_in_catalog	MDM2	novel	12633	11	NA	NA	11	2	intron_retention	TRUE	canonical	1	9102	junction_11	177101.89390553004	NA	5	NA	TRUE	NA	NA	NA	C	coding	486	1461	310	1770	35.0	23	True	AATAAA	-25
PB.2751.5	chr12	+	3168	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	-14	9479	-14	400	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	350	1810	60.0	-17	True	NA	NA
PB.2751.6	chr12	+	2453	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	-14	10194	-14	276	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	5	NA	TRUE	NA	NA	NA	C	coding	486	1461	350	1810	5.0	-17	True	TATAAA	-21
PB.2751.7	chr12	+	5620	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-12	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	179246.5998824566	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	348	1808	35.0	-15	True	AATAAA	-26
PB.4598.26	chr16	-	4222	10	full-splice_match	SLC7A5	ENST00000261622.4	4537	10	-19	334	-19	-334	multi-exon	FALSE	canonical	1	1488895	junction_9	437047.0731744981	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	86	1609	5.0	-3	True	NA	NA
PB.2751.2	chr12	+	2073	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	-37	10597	-37	-127	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	373	1833	35.0	-8685	False	TTTAAA	-19
PB.2751.3	chr12	+	4862	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	-34	7805	-34	-1300	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	370	1830	20.0	-8682	False	AATGAA	-16
PB.11919.1	chr9	-	2647	9	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-23	1	intron_retention	FALSE	canonical	1	761972	junction_8	392171.2640058988	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	1500	2540	5.0	-21	True	AATAAA	-22
PB.11919.2	chr9	-	2497	11	novel_not_in_catalog	DPP7	novel	1590	13	NA	NA	-12	1	intron_retention	FALSE	canonical	1	11318	junction_7	637538.4718437077	NA	3	NA	TRUE	NA	NA	NA	C	coding	346	1041	1350	2390	5.0	-10	True	AATAAA	-22
PB.2751.8	chr12	+	5347	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	-9	7295	-9	-790	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	345	1805	35.0	-12	True	NA	NA
PB.2751.9	chr12	+	5692	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-3	-4	intron_retention	FALSE	non_canonical	0	0	junction_12	242352.313515652	NA	13	3	TRUE	NA	NA	NA	C	coding	430	1293	594	1886	35.0	-6	True	AATAAA	-19
PB.11919.7	chr9	-	1600	13	full-splice_match	DPP7	ENST00000371579.6	1590	13	-10	0	-2	0	multi-exon	FALSE	canonical	1	192692	junction_12	483814.43424163724	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	16	1494	5.0	0	True	AATAAA	-21
PB.11919.6	chr9	-	2496	10	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-11	0	intron_retention	FALSE	canonical	1	74818	junction_3	657381.6278937577	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	1418	2290	5.0	-9	True	AATAAA	-21
PB.1211.2	chr1	-	4428	2	full-splice_match	IRF2BP2	ENST00000366610.7	4615	2	185	2	185	-2	multi-exon	FALSE	canonical	1	999927	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	420	1562	20.0	-24	True	AATAAA	-20
PB.1211.3	chr1	-	4192	3	novel_not_in_catalog	IRF2BP2	novel	4615	2	NA	NA	181	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	397275.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	396	1191	424	1614	20.0	-28	True	AATAAA	-20
PB.1211.4	chr1	-	3680	2	novel_not_in_catalog	IRF2BP2	novel	4615	2	NA	NA	4	-2	any annotated donor/acceptor	FALSE	canonical	1	937	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	221	814	20.0	3	True	AATAAA	-20
PB.1211.6	chr1	-	2317	1	novel_in_catalog	IRF2BP2	novel	4615	2	NA	NA	13	1466	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	259	780	166	945	35.0	12	True	AATAAA	-15
PB.8883.8	chr4	-	3505	1	novel_in_catalog	SNCA	novel	3041	6	NA	NA	-18	-11138	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1309	False	NA	NA
PB.3165.10	chr13	+	2120	9	incomplete-splice_match	SETDB2	ENST00000258672.9	2138	11	-436	3021	-51	-3021	3prime_fragment	FALSE	canonical	1	66159	junction_5	34464.95805162107	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1242	877	2118	65.0	-1054	False	AATATA	-6
PB.3165.11	chr13	+	2555	11	full-splice_match	SETDB2	ENST00000258672.9	2138	11	-419	2	-34	-2	multi-exon	FALSE	canonical	1	66159	junction_5	31596.39958428808	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	860	2506	40.0	-1037	False	AATAAA	-24
PB.10750.11	chr7	+	2821	4	full-splice_match	ORAI2	ENST00000356387.6	10811	4	50	7940	4	149	multi-exon	FALSE	canonical	1	3967	junction_1	153256.12876561322	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	228	992	80.0	5	True	NA	NA
PB.10750.10	chr7	+	2634	4	full-splice_match	ORAI2	ENST00000495936.5	937	4	44	-1741	3	0	multi-exon	FALSE	canonical	1	162615	junction_1	80456.31495828445	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	206	970	85.0	4	True	NA	NA
PB.493.12	chr1	+	1412	7	novel_in_catalog	IFI44	novel	819	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	32319	junction_6	187280.2307192353	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	84	1142	15.0	2	True	AATAAA	-27
PB.10750.12	chr7	+	3755	2	novel_in_catalog	ORAI2	novel	463	3	NA	NA	16	-1412	no_combination_of_known_junctions	FALSE	canonical	1	807	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	77	610	90.0	17	True	NA	NA
PB.11708.1	chr9	-	5242	37	full-splice_match	ELP1	ENST00000374647.9	5905	37	11	652	11	472	multi-exon	FALSE	canonical	1	114880	junction_36	100887.06885819713	NA	0	NA	TRUE	NA	NA	NA	C	coding	1332	3999	298	4296	30.0	-19	True	ATTAAA	-24
PB.2760.10	chr12	-	1276	3	incomplete-splice_match	ZFC3H1	ENST00000552994.5	7597	34	-27	38091	12	-2875	3prime_fragment	FALSE	canonical	1	103358	junction_2	46724.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1038	237	1274	50.0	0	True	GATAAA	-12
PB.12379.2	chrX	+	1873	10	novel_not_in_catalog	CD99	novel	1291	10	NA	NA	16	2764	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	83128.72594304317	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	159	641	15.0	-14	True	AATAAA	-20
PB.12379.3	chrY	+	2802	9	full-splice_match	CD99	ENST00000482405.7_PAR_Y	842	9	-28	-1932	2	1932	multi-exon	FALSE	canonical	1	20	junction_8	20220.827740228637	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	80	562	40.0	NA	False	AATAAA	-31
PB.10717.6	chr7	-	3436	12	novel_in_catalog	MCM7	novel	2515	14	NA	NA	-18	0	intron_retention	FALSE	canonical	1	1040509	junction_11	456674.00924476306	NA	3	NA	TRUE	NA	NA	NA	C	coding	479	1440	883	2322	15.0	-10	True	AATAAA	-18
PB.240.23	chr1	-	3969	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	2	-13	combination_of_known_junctions	FALSE	canonical	1	28174	junction_14	157128.76277582123	NA	0	NA	TRUE	NA	NA	NA	C	coding	1166	3501	121	3621	70.0	-8	True	NA	NA
PB.10717.4	chr7	-	3115	14	novel_in_catalog	MCM7	novel	2515	14	NA	NA	27	0	intron_retention	FALSE	canonical	1	1040509	junction_13	456568.1643682093	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	1129	2964	15.0	9916	False	AATAAA	-18
PB.10717.2	chr7	-	2700	14	full-splice_match	MCM7	ENST00000485286.5	2900	14	207	-7	-77	6	multi-exon	FALSE	canonical	1	147206	junction_13	650282.9026495192	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	911	2542	15.0	1370	False	AATAAA	-25
PB.10717.3	chr7	-	2478	14	full-splice_match	MCM7	ENST00000489841.5	2515	14	-9	46	-9	6	multi-exon	FALSE	canonical	1	1040509	junction_13	458780.7991821895	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	689	2320	15.0	-1	True	AATAAA	-25
PB.10717.1	chr7	-	2395	15	full-splice_match	MCM7	ENST00000303887.9	2957	15	563	-1	-7	0	multi-exon	FALSE	canonical	1	1040509	junction_14	452238.64091851044	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	84	2243	10.0	1	True	AATAAA	-19
PB.1042.10	chr1	-	2020	12	full-splice_match	KLHL12	ENST00000367261.7	3359	12	55	1284	55	-1268	multi-exon	FALSE	canonical	1	63468	junction_3	41475.50525608982	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	177	1871	10.0	26	True	NA	NA
PB.9003.11	chr4	+	4141	10	full-splice_match	USP38	ENST00000307017.8	7009	10	5	2863	5	-2863	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	2	NA	TRUE	NA	NA	NA	C	coding	1042	3129	502	3630	20.0	1	True	TATAAA	-37
PB.10717.8	chr7	-	2878	13	novel_not_in_catalog	MCM7	novel	2515	14	NA	NA	-66	0	intron_retention	FALSE	canonical	1	43280	junction_9	873461.8533015742	NA	1	1	TRUE	NA	NA	NA	C	coding	414	1245	1483	2727	15.0	-11	True	AATAAA	-18
PB.10717.9	chr7	-	2597	15	novel_in_catalog	MCM7	novel	2515	14	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	147206	junction_14	636727.5830899358	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1836	611	2446	15.0	-1	True	AATAAA	-18
PB.10442.17	chr7	-	3140	21	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	11486	junction_2	63502.54565911118	NA	5	NA	TRUE	NA	NA	NA	C	coding	737	2214	457	2670	25.0	-35	True	AATAAA	-13
PB.10442.16	chr7	-	3385	23	full-splice_match	OSBPL3	ENST00000313367.6	6760	23	-11	3386	-11	0	multi-exon	FALSE	canonical	1	104396	junction_15	53854.266638315916	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	467	3127	25.0	-45	True	AATAAA	-13
PB.10442.15	chr7	-	3667	22	novel_not_in_catalog	OSBPL3	novel	6760	23	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	14070	junction_13	72521.59790906048	NA	7	1	TRUE	NA	NA	NA	C	coding	323	972	459	1430	25.0	-37	True	AATAAA	-13
PB.1312.5	chr10	-	2316	14	full-splice_match	MINDY3	ENST00000477891.1	2307	14	-15	6	7	-6	multi-exon	FALSE	canonical	1	57829	junction_10	61756.161259927176	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	682	1500	20.0	-7	True	AATAAA	-14
PB.10442.13	chr7	-	3311	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-24	6	combination_of_known_junctions	FALSE	canonical	1	68426	junction_14	56848.26795966263	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	480	3047	40.0	-58	True	AATAAA	-19
PB.10442.12	chr7	-	3309	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-34	9	combination_of_known_junctions	FALSE	canonical	1	34018	junction_11	62364.17146057277	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2553	490	3042	45.0	-68	True	AATAAA	-22
PB.10442.11	chr7	-	4248	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-27	796	combination_of_known_junctions	FALSE	canonical	1	34018	junction_11	62364.17146057277	NA	1	NA	TRUE	NA	NA	NA	C	coding	850	2553	483	3035	25.0	-61	True	AATACA	-15
PB.10442.10	chr7	-	4319	23	full-splice_match	OSBPL3	ENST00000313367.6	6760	23	10	2431	10	796	multi-exon	FALSE	canonical	1	104396	junction_15	53854.266638315916	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	446	3106	25.0	-24	True	AATACA	-15
PB.7805.3	chr22	-	4399	16	novel_not_in_catalog	MRTFA	novel	4496	15	NA	NA	-9	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	107299.11155113179	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	618	3413	75.0	-1	True	NA	NA
PB.1312.2	chr10	-	2287	14	novel_in_catalog	MINDY3	novel	2452	6	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	19897	junction_5	70024.02384177934	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	209	1465	20.0	-1	True	AATAAA	-20
PB.7805.1	chr22	-	4501	15	full-splice_match	MRTFA	ENST00000355630.7	4496	15	-34	29	-17	-8	multi-exon	FALSE	canonical	1	63931	junction_14	89865.644666874	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	626	3421	75.0	-9	True	NA	NA
PB.7805.6	chr22	-	2551	1	novel_in_catalog	MRTFA	novel	4496	15	NA	NA	-35	-11711	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-26	True	NA	NA
PB.10442.19	chr7	-	4495	3	novel_not_in_catalog	OSBPL3	novel	6760	23	NA	NA	11	-10952	any annotated donor/acceptor	FALSE	canonical	1	9615	junction_1	52457.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	2	352	75.0	-23	True	NA	NA
PB.3063.12	chr13	+	4077	14	novel_in_catalog	NUP58	novel	4332	16	NA	NA	-1	-12	no_combination_of_known_junctions	FALSE	canonical	1	14382	junction_2	163989.57816221885	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	143	1807	15.0	7	True	AATAAA	-12
PB.2266.1	chr11	-	6667	6	full-splice_match	EXPH5	ENST00000265843.8	10187	6	-5	3525	-5	-7	multi-exon	FALSE	canonical	1	22350	junction_5	3244.8454878468406	NA	0	NA	TRUE	NA	NA	NA	A	coding	1989	5970	117	6086	80.0	-9	True	GATAAA	-34
PB.240.25	chr1	-	3872	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-11	-13	combination_of_known_junctions	FALSE	canonical	1	7660	junction_21	162189.14687433047	NA	1	NA	TRUE	NA	NA	NA	C	coding	1161	3486	39	3524	70.0	1	True	NA	NA
PB.8257.10	chr3	+	2754	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	56366.66000252277	NA	4	NA	TRUE	NA	NA	NA	C	coding	331	996	270	1265	35.0	-57	True	AATAAA	-20
PB.3063.10	chr13	+	4186	15	full-splice_match	NUP58	ENST00000381718.7	2489	15	-6	-1691	2	-7	multi-exon	FALSE	canonical	1	14382	junction_2	133503.46695918593	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	148	1911	15.0	2	True	AATAAA	-17
PB.4826.2	chr17	+	3277	17	full-splice_match	SLC47A1	ENST00000270570.8	3280	17	-19	22	7	-22	multi-exon	FALSE	canonical	1	37609	junction_1	12070.698172479244	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	106	1818	70.0	-32	True	NA	NA
PB.4826.1	chr17	+	3180	17	full-splice_match	SLC47A1	ENST00000270570.8	3280	17	-31	131	-5	-1	multi-exon	TRUE	canonical	1	37609	junction_1	12070.698172479244	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	118	1830	25.0	-44	True	NA	NA
PB.11700.19	chr9	+	2428	16	full-splice_match	SLC44A1	ENST00000374724.1	3088	16	3	657	3	-657	multi-exon	FALSE	canonical	1	136759	junction_1	142103.02592061702	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	245	2209	30.0	-26	True	AATAAA	-34
PB.7912.2	chr3	-	3027	13	full-splice_match	RAD18	ENST00000264926.6	5886	13	40	2819	8	1369	multi-exon	FALSE	canonical	1	100543	junction_12	26357.753372663738	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	78	1565	45.0	-20	True	TATAAA	-3
PB.7912.3	chr3	-	2614	13	full-splice_match	RAD18	ENST00000264926.6	5886	13	32	3240	0	948	multi-exon	FALSE	canonical	1	100543	junction_12	26357.753372663738	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	86	1573	40.0	-28	True	AGTAAA	-18
PB.11700.11	chr9	+	3569	16	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-12	-5588	intron_retention	FALSE	canonical	1	4698	junction_6	220697.7552550597	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	900	2195	100.0	-41	True	AATACA	-11
PB.11700.10	chr9	+	3327	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	-14	7198	-14	-5870	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	262	2235	10.0	-43	True	NA	NA
PB.11700.13	chr9	+	3759	17	novel_in_catalog	SLC44A1	novel	9640	16	NA	NA	31	-5588	intron_retention	FALSE	canonical	1	7143	junction_2	191155.0316216587	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	511	2385	100.0	2	True	AATACA	-11
PB.11700.12	chr9	+	3516	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-11	-5588	intron_retention	TRUE	non_canonical	0	0	junction_1	165285.1754305551	NA	2	1	TRUE	NA	NA	NA	C	coding	657	1974	169	2142	100.0	-40	True	AATACA	-11
PB.11700.15	chr9	+	2749	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	-7	7769	-7	-6441	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	255	2228	40.0	-36	True	GATAAA	-33
PB.240.29	chr1	-	3586	20	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-6	-13	no_combination_of_known_junctions	FALSE	canonical	1	5771	junction_15	167452.46252760678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1043	3132	107	3238	70.0	6	True	NA	NA
PB.11700.17	chr9	+	3703	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-3	-5588	intron_retention	FALSE	canonical	1	4698	junction_7	195015.05968713632	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	1034	2329	100.0	-32	True	AATACA	-11
PB.11700.16	chr9	+	3684	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-6	-5589	intron_retention	FALSE	canonical	1	1290	junction_15	194754.13413772345	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	254	2311	95.0	-35	True	AATACA	-10
PB.7912.1	chr3	-	5728	13	full-splice_match	RAD18	ENST00000264926.6	5886	13	40	118	8	-118	multi-exon	FALSE	canonical	1	100543	junction_12	26357.753372663738	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	78	1565	20.0	-20	True	NA	NA
PB.11600.1	chr9	-	6165	24	full-splice_match	CEMIP2	ENST00000377044.8	6523	24	357	1	-14	-1	multi-exon	TRUE	canonical	1	133880	junction_22	66557.69383455731	NA	3	NA	TRUE	NA	NA	NA	C	coding	1383	4152	184	4335	30.0	938	False	AATAAA	-21
PB.8257.13	chr3	+	3655	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	118	-1887	4	404	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	172	1167	80.0	-7876	False	AATACA	-39
PB.7912.6	chr3	-	1761	12	incomplete-splice_match	RAD18	ENST00000264926.6	5886	13	12	13042	12	-9	3prime_fragment	FALSE	canonical	1	100543	junction_11	27351.131870455403	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	106	1494	30.0	5774	False	GATAAA	-39
PB.10463.1	chr7	-	2671	1	novel_in_catalog	ZNRF2P2	novel	590	2	NA	NA	36547	5122	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	1415	1714	10.0	4346	False	NA	NA
PB.4572.1	chr16	+	4566	11	full-splice_match	GAN	ENST00000648994.1	4544	11	-37	15	-18	-15	multi-exon	FALSE	canonical	1	31996	junction_1	12406.423651076888	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	186	1979	20.0	-37	True	AATAAA	-19
PB.3411.1	chr14	-	1926	1	novel_in_catalog	RPL36AL	novel	746	2	NA	NA	69	-172	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	132	399	1435	1833	20.0	3	True	AATAAA	-20
PB.4572.2	chr16	+	2868	11	full-splice_match	GAN	ENST00000648994.1	4544	11	-28	1704	-9	901	multi-exon	FALSE	canonical	1	31996	junction_1	12406.423651076888	NA	2	NA	TRUE	NA	NA	NA	C	coding	597	1794	177	1970	85.0	-28	True	AATAAA	-15
PB.1073.10	chr1	+	6860	22	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	211	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	103854.51690734956	NA	27	3	TRUE	NA	NA	NA	C	coding	519	1560	637	2196	20.0	NA	False	AATAAA	-18
PB.1073.11	chr1	+	4413	21	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	219	0	intron_retention	FALSE	non_canonical	0	0	junction_1	106551.04210278753	NA	5	1	TRUE	NA	NA	NA	C	coding	519	1560	629	2188	20.0	NA	False	AATAAA	-24
PB.1073.12	chr1	+	3438	20	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	-207	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104915.2040540663	NA	4	1	TRUE	NA	NA	NA	C	coding	519	1560	553	2112	20.0	NA	False	AATAAA	-24
PB.7912.5	chr3	-	1901	13	full-splice_match	RAD18	ENST00000264926.6	5886	13	42	3943	10	245	multi-exon	FALSE	canonical	1	100543	junction_12	26357.753372663738	NA	2	1	TRUE	NA	NA	NA	C	coding	495	1488	76	1563	10.0	-18	True	ATTAAA	-16
PB.6338.26	chr2	-	4956	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	1	236917	junction_8	196211.1807654971	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	271	3228	60.0	-15	True	ATTAAA	-24
PB.6416.8	chr2	-	2387	8	incomplete-splice_match	CEBPZ	ENST00000234170.9	3463	16	99	14568	99	12428	3prime_fragment	FALSE	canonical	1	475500	junction_7	52048.73871788296	NA	1	NA	TRUE	NA	NA	NA	C	coding	780	2340	48	2387	60.0	-3	True	AAAACA	-24
PB.6416.9	chr2	-	2000	4	incomplete-splice_match	CEBPZ	ENST00000234170.9	3463	16	117	20862	117	6134	3prime_fragment	FALSE	canonical	1	475500	junction_3	61524.9179673479	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1971	30	2000	55.0	356	False	AAGAAA	-12
PB.9574.7	chr5	-	3048	9	full-splice_match	CCDC69	ENST00000355417.6	3451	9	55	348	2	-7	multi-exon	FALSE	canonical	1	330288	junction_8	115112.86685839848	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	121	1011	75.0	-5	True	NA	NA
PB.9574.1	chr5	-	3397	9	full-splice_match	CCDC69	ENST00000355417.6	3451	9	53	1	0	-1	multi-exon	FALSE	canonical	1	330288	junction_8	115112.86685839848	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	123	1013	15.0	-7	True	AAAAAG	-16
PB.9574.2	chr5	-	3316	8	novel_in_catalog	CCDC69	novel	3323	8	NA	NA	6	-2	no_combination_of_known_junctions	FALSE	canonical	1	942	junction_4	205808.65525104845	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	117	524	15.0	-1	True	AAAAAG	-15
PB.9574.3	chr5	-	3215	9	full-splice_match	CCDC69	ENST00000355417.6	3451	9	53	183	0	0	multi-exon	FALSE	canonical	1	330288	junction_8	115112.86685839848	NA	2	1	TRUE	NA	NA	NA	C	coding	296	891	123	1013	90.0	-7	True	NA	NA
PB.6416.1	chr2	-	3346	16	full-splice_match	CEBPZ	ENST00000234170.9	3463	16	120	-3	120	3	multi-exon	FALSE	canonical	1	475500	junction_15	151336.2533397291	NA	0	NA	TRUE	NA	NA	NA	C	coding	1054	3165	27	3191	40.0	-15	True	AATAAA	-34
PB.6416.2	chr2	-	3167	16	full-splice_match	CEBPZ	ENST00000234170.9	3463	16	118	178	118	-6	multi-exon	FALSE	canonical	1	475500	junction_15	151336.2533397291	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3138	29	3166	75.0	357	False	ATTAAA	-8
PB.6416.3	chr2	-	3093	14	novel_in_catalog	CEBPZ	novel	3463	16	NA	NA	118	61	intron_retention	FALSE	canonical	1	582	junction_1	236423.31806329757	NA	7	NA	TRUE	NA	NA	NA	C	coding	1007	3024	29	3052	25.0	357	False	ATTAAA	-16
PB.6416.4	chr2	-	3116	16	full-splice_match	CEBPZ	ENST00000234170.9	3463	16	126	221	126	-49	multi-exon	FALSE	canonical	1	475500	junction_15	151336.2533397291	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3096	21	3116	65.0	-9	True	AAAAAG	-8
PB.6416.5	chr2	-	2880	13	incomplete-splice_match	CEBPZ	ENST00000234170.9	3463	16	95	9442	95	-9270	3prime_fragment	FALSE	canonical	1	475500	junction_12	167147.60855825324	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2829	52	2880	65.0	-7	True	NA	NA
PB.6416.6	chr2	-	2635	11	incomplete-splice_match	CEBPZ	ENST00000234170.9	3463	16	114	10723	114	-10551	3prime_fragment	FALSE	canonical	1	475500	junction_10	92843.29236089165	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2601	33	2633	25.0	353	False	NA	NA
PB.6416.7	chr2	-	2520	10	incomplete-splice_match	CEBPZ	ENST00000234170.9	3463	16	95	12328	95	-12156	3prime_fragment	FALSE	canonical	1	475500	junction_9	72645.05048997735	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2469	52	2520	65.0	-7	True	TATAAA	-13
PB.406.8	chr1	+	2202	6	full-splice_match	BTF3L4	ENST00000313334.12	4703	6	171	2330	-8	-32	multi-exon	FALSE	canonical	1	1261	junction_4	56795.96941826066	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	98	574	30.0	1	True	AATAAA	-14
PB.9326.2	chr5	-	1637	16	full-splice_match	SSBP2	ENST00000514493.5	1790	16	152	1	-1	-1	multi-exon	TRUE	canonical	1	21263	junction_12	97397.18905558255	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	57	1052	35.0	-8	True	AATAAA	-41
PB.9326.1	chr5	-	1701	17	full-splice_match	SSBP2	ENST00000320672.8	8780	17	165	6914	9	1	multi-exon	FALSE	canonical	1	245499	junction_7	52052.19893514946	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	47	1132	30.0	2	True	AATAAA	-25
PB.6461.3	chr2	+	3182	22	full-splice_match	PPP1R21	ENST00000416913.5	3208	22	27	-1	-1	0	multi-exon	FALSE	canonical	1	33279	junction_2	59188.99899658456	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	336	2540	25.0	-2	True	AATAAA	-18
PB.8916.3	chr4	+	4499	11	full-splice_match	NPNT	ENST00000514622.5	2362	11	2	-2139	2	-2	multi-exon	FALSE	canonical	1	11150	junction_8	49544.76515798616	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	211	1821	20.0	2	True	AATAAA	-34
PB.8916.2	chr4	+	4638	13	full-splice_match	NPNT	ENST00000453617.6	2419	13	1	-2220	0	-3	multi-exon	FALSE	canonical	1	16144	junction_2	52825.2170013816	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	213	1961	25.0	0	True	AATAAA	-33
PB.8916.1	chr4	+	4604	12	full-splice_match	NPNT	ENST00000379987.6	4598	12	-13	7	-13	-3	multi-exon	FALSE	canonical	1	70567	junction_1	31016.98055997474	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	230	1927	25.0	-5432	False	AATAAA	-33
PB.406.3	chr1	+	3666	5	full-splice_match	BTF3L4	ENST00000472944.6	2159	5	-12	-1495	-12	-803	multi-exon	FALSE	canonical	1	1261	junction_3	37367.46925803245	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	209	511	25.0	-3	True	ATTAAA	-40
PB.406.4	chr1	+	3708	6	full-splice_match	BTF3L4	ENST00000313334.12	4703	6	170	825	-9	-825	multi-exon	FALSE	canonical	1	1261	junction_4	56795.96941826066	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	99	575	45.0	0	True	ATTAAA	-18
PB.2250.1	chr11	+	3394	22	incomplete-splice_match	DYNC2H1	ENST00000398093.7	12945	90	-149	325802	-5	-2651	3prime_fragment	FALSE	canonical	1	28319	junction_18	7028.297548219188	NA	2	NA	TRUE	NA	NA	NA	A	coding	1081	3243	150	3392	70.0	0	True	GATAAA	-12
PB.9301.4	chr5	+	2627	22	full-splice_match	IQGAP2	ENST00000514350.5	2617	22	-9	-1	-9	1	multi-exon	FALSE	canonical	1	1585	junction_1	72027.76203102023	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2475	153	2627	65.0	1039	False	AGTAAA	-7
PB.406.7	chr1	+	3274	5	full-splice_match	BTF3L4	ENST00000472944.6	2159	5	-8	-1107	-8	1107	multi-exon	FALSE	canonical	1	1261	junction_3	37367.46925803245	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	205	507	45.0	1	True	ATTAAA	-17
PB.381.8	chr1	-	2133	9	full-splice_match	IPP	ENST00000396478.3	3113	9	8	972	8	-972	multi-exon	FALSE	canonical	1	25179	junction_8	22678.65010174768	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	96	1850	70.0	7	True	NA	NA
PB.182.5	chr1	-	4501	1	novel_in_catalog	RSRP1	novel	480	2	NA	NA	8	1686	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	158	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.6461.1	chr2	+	3306	23	novel_not_in_catalog	PPP1R21	novel	2481	21	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	83955.93151722885	NA	2	1	TRUE	NA	NA	NA	C	coding	737	2214	452	2665	25.0	-8	True	AATAAA	-17
PB.7057.3	chr2	+	2285	23	full-splice_match	SP100	ENST00000409112.5	2198	23	-85	-2	25	2	multi-exon	FALSE	canonical	1	98698	junction_15	253718.6979036051	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	117	2183	10.0	0	True	CATAAA	-19
PB.182.4	chr1	-	5418	1	genic	RSRP1_AL928711.1	novel	NA	NA	NA	NA	-31	2541	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	138	417	4504	4920	15.0	NA	False	NA	NA
PB.6461.6	chr2	+	2956	23	novel_in_catalog	PPP1R21	novel	2481	21	NA	NA	0	-258	combination_of_known_junctions	FALSE	canonical	1	5616	junction_12	73288.95787688451	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	158	1537	50.0	-1	True	AATAGA	-14
PB.10169.23	chr6	-	4533	31	incomplete-splice_match	LAMA4	ENST00000389463.8	6297	39	7	20057	-5	-6870	3prime_fragment	FALSE	canonical	1	174854	junction_30	51656.90876909776	NA	0	NA	TRUE	NA	NA	NA	C	coding	1419	4257	277	4533	70.0	128	False	CATAAA	-37
PB.381.3	chr1	-	2364	10	novel_not_in_catalog	IPP	novel	1947	10	NA	NA	-13	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	31911.095013923517	NA	1	1	TRUE	NA	NA	NA	C	coding	584	1755	118	1872	30.0	-15	True	AATAAA	-16
PB.3620.10	chr14	-	2274	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-163	1640	-84	228	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	297	1769	35.0	4682	False	AATGAA	-17
PB.3620.11	chr14	-	2037	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-127	1841	-48	27	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	261	1733	15.0	4718	False	AATAAA	-42
PB.381.6	chr1	-	2951	8	novel_in_catalog	IPP	novel	1947	10	NA	NA	-1	-26	no_combination_of_known_junctions	FALSE	canonical	1	2451	junction_3	32676.226975385925	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	106	1722	95.0	-3	True	NA	NA
PB.6461.7	chr2	+	2921	22	full-splice_match	PPP1R21	ENST00000416913.5	3208	22	29	258	1	-258	multi-exon	FALSE	canonical	1	33279	junction_2	59188.99899658456	NA	3	NA	TRUE	NA	NA	NA	C	coding	734	2205	334	2538	50.0	0	True	AATAGA	-14
PB.6461.5	chr2	+	3108	21	full-splice_match	PPP1R21	ENST00000281394.8	3137	21	28	1	0	0	multi-exon	FALSE	canonical	1	11877	junction_17	64061.110873348895	NA	2	1	TRUE	NA	NA	NA	C	coding	769	2310	158	2467	25.0	-1	True	AATAAA	-17
PB.4967.1	chr17	+	2189	4	full-splice_match	IGFBP4	ENST00000269593.4	2200	4	-27	38	-27	-38	multi-exon	FALSE	canonical	1	2416127	junction_3	354724.68485949305	NA	0	NA	TRUE	NA	NA	NA	A	coding	258	777	303	1079	65.0	-9663	False	NA	NA
PB.8779.1	chr4	+	1980	15	full-splice_match	FIP1L1	ENST00000306932.10	1878	15	-51	-51	0	4	multi-exon	FALSE	canonical	1	199597	junction_1	216072.59024638135	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	195	1757	50.0	2	True	AATAAA	-23
PB.1279.2	chr10	+	4233	20	novel_in_catalog	FBH1	novel	3640	22	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	101689	junction_1	125513.20483905081	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	128	1696	15.0	-33	True	ATTAAA	-20
PB.1279.3	chr10	+	3307	20	novel_in_catalog	FBH1	novel	3640	22	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	1	21698	junction_1	129840.29934210157	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	161	3070	85.0	0	True	NA	NA
PB.1279.1	chr10	+	3643	22	novel_in_catalog	FBH1	novel	3640	22	NA	NA	-14	-1	combination_of_known_junctions	TRUE	canonical	1	10792	junction_2	174208.10162492338	NA	1	NA	TRUE	NA	NA	NA	C	coding	969	2910	422	3331	15.0	-35	True	ATTAAA	-20
PB.1279.6	chr10	+	3598	22	full-splice_match	FBH1	ENST00000397269.7	3640	22	40	2	-5	-1	multi-exon	FALSE	canonical	1	16091	junction_17	176031.30117326532	NA	1	NA	TRUE	NA	NA	NA	C	coding	1060	3183	104	3286	15.0	-9	True	ATTAAA	-20
PB.1279.7	chr10	+	3465	20	novel_not_in_catalog	FBH1	novel	3640	22	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	1	56	junction_13	155673.02522946673	NA	1	NA	TRUE	NA	NA	NA	C	coding	1017	3054	101	3154	15.0	-6	True	ATTAAA	-19
PB.1279.4	chr10	+	4227	23	novel_not_in_catalog	FBH1	novel	3640	22	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	7428	junction_1	181808.62048560323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	631	3915	15.0	-22	True	ATTAAA	-20
PB.1279.5	chr10	+	3470	21	full-splice_match	FBH1	ENST00000362091.8	3560	21	14	76	-3	6	multi-exon	FALSE	canonical	1	101689	junction_1	122393.8058821912	NA	0	NA	TRUE	NA	NA	NA	C	coding	1043	3132	102	3233	85.0	-7	True	NA	NA
PB.9435.1	chr5	-	4542	15	full-splice_match	P4HA2	ENST00000360568.7	2313	15	235	-2464	-8	1692	multi-exon	FALSE	canonical	1	192710	junction_14	131224.62162573123	NA	6	NA	TRUE	NA	NA	NA	C	coding	533	1602	77	1678	10.0	3	True	NA	NA
PB.9435.2	chr5	-	2848	15	full-splice_match	P4HA2	ENST00000360568.7	2313	15	229	-764	4	-8	multi-exon	FALSE	canonical	1	192710	junction_14	131224.62162573123	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	83	1684	20.0	-3	True	NA	NA
PB.9435.3	chr5	-	2678	15	full-splice_match	P4HA2	ENST00000360568.7	2313	15	229	-594	4	-178	multi-exon	FALSE	canonical	1	192710	junction_14	131224.62162573123	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	83	1684	25.0	-3	True	NA	NA
PB.9435.4	chr5	-	2243	16	full-splice_match	P4HA2	ENST00000166534.8	2230	16	-9	-4	-9	4	multi-exon	FALSE	canonical	1	86094	junction_15	203217.65651749415	NA	8	2	TRUE	NA	NA	NA	C	coding	535	1608	232	1839	25.0	-16	True	AATAAA	-28
PB.9435.5	chr5	-	2573	16	novel_in_catalog	P4HA2	novel	3349	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	10016	junction_14	193320.67463247577	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	575	2176	35.0	30	True	AATAAA	-21
PB.9435.6	chr5	-	2282	16	full-splice_match	P4HA2	ENST00000379086.5	2223	16	-62	3	-24	0	multi-exon	FALSE	canonical	1	20816	junction_15	182334.00486925695	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	284	1885	35.0	-31	False	AATAAA	-21
PB.9435.7	chr5	-	2082	15	full-splice_match	P4HA2	ENST00000360568.7	2313	15	228	3	3	0	multi-exon	FALSE	canonical	1	192710	junction_14	131224.62162573123	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	84	1685	35.0	-4	True	AATAAA	-21
PB.1082.1	chr1	-	2175	3	incomplete-splice_match	PIGR	ENST00000356495.4	4279	11	14570	6	-63	-6	5prime_fragment	FALSE	canonical	1	495321	junction_1	86638.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	82	249	133	381	30.0	1	True	ATTAAA	-17
PB.497.10	chr1	+	3217	10	full-splice_match	PRKACB	ENST00000370685.7	4481	10	0	1264	0	-1260	multi-exon	FALSE	canonical	1	203406	junction_1	114489.41599602607	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	92	1288	35.0	0	True	AATAAA	-19
PB.497.11	chr1	+	4411	10	full-splice_match	PRKACB	ENST00000370685.7	4481	10	63	7	12	-3	multi-exon	FALSE	canonical	1	203406	junction_1	114489.41599602607	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	29	1225	35.0	6	True	ATTAAA	-16
PB.497.12	chr1	+	4240	10	novel_not_in_catalog	PRKACB	novel	4513	10	NA	NA	957	-1	any annotated donor/acceptor	FALSE	canonical	1	2438	junction_1	170331.8235456753	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	169	1050	30.0	-3	True	ATTAAA	-20
PB.11760.4	chr9	+	1630	10	incomplete-splice_match	CNTRL	ENST00000373855.5	7660	44	-52	63911	-52	6	3prime_fragment	FALSE	canonical	1	30541	junction_1	27473.169339925946	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1128	502	1629	80.0	5	True	NA	NA
PB.8779.2	chr4	+	2026	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	226310.96955574694	NA	2	1	TRUE	NA	NA	NA	C	coding	535	1608	195	1802	50.0	2	True	AATAAA	-24
PB.6568.2	chr2	-	2888	9	full-splice_match	CCDC142	ENST00000393965.7	3406	9	206	312	-32	0	multi-exon	FALSE	canonical	1	32352	junction_8	12783.272035652688	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	192	2444	100.0	-31	False	NA	NA
PB.527.1	chr1	+	3152	11	full-splice_match	GBP6	ENST00000370456.4	2987	11	-170	5	-170	-5	multi-exon	FALSE	canonical	1	17800	junction_1	4809.156766003786	NA	2	NA	TRUE	NA	NA	NA	C	coding	633	1902	264	2165	35.0	11	True	AATAAA	-18
PB.888.3	chr1	+	3928	18	full-splice_match	DDR2	ENST00000446985.6	2998	18	-164	-766	-164	755	multi-exon	FALSE	canonical	1	6140	junction_1	49241.90447064566	NA	2	NA	TRUE	NA	NA	NA	C	coding	855	2568	431	2998	20.0	-1355	False	AGTAAA	-22
PB.9310.4	chr5	+	3489	9	full-splice_match	SCAMP1	ENST00000621999.4	4509	9	1	1019	1	-763	multi-exon	FALSE	canonical	1	278	junction_7	163595.70627421545	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	89	1105	35.0	0	True	ATTAAA	-38
PB.9310.5	chr5	+	3684	9	full-splice_match	SCAMP1	ENST00000621999.4	4509	9	34	791	6	-535	multi-exon	FALSE	canonical	1	278	junction_7	163595.70627421545	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	56	1072	20.0	0	True	AATAAA	-15
PB.9310.6	chr5	+	2205	9	full-splice_match	SCAMP1	ENST00000621999.4	4509	9	34	2270	6	-28	multi-exon	FALSE	canonical	1	278	junction_7	163595.70627421545	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	56	1072	70.0	0	True	AATATA	-16
PB.9310.7	chr5	+	1886	9	full-splice_match	SCAMP1	ENST00000621999.4	4509	9	39	2584	-6	-342	multi-exon	FALSE	canonical	1	278	junction_7	163595.70627421545	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	51	1067	45.0	5	True	NA	NA
PB.9310.1	chr5	+	4176	9	full-splice_match	SCAMP1	ENST00000621999.4	4509	9	34	299	6	-43	multi-exon	FALSE	canonical	1	278	junction_7	163595.70627421545	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	56	1072	45.0	0	True	NA	NA
PB.9310.2	chr5	+	3667	8	novel_in_catalog	SCAMP1	novel	4509	9	NA	NA	-51	-535	combination_of_known_junctions	FALSE	canonical	1	27552	junction_6	153474.88646375088	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	141	1055	20.0	2	True	AATAAA	-15
PB.9310.3	chr5	+	2172	8	novel_in_catalog	SCAMP1	novel	4509	9	NA	NA	-35	-28	combination_of_known_junctions	FALSE	canonical	1	27552	junction_6	153474.88646375088	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	125	1039	70.0	-2	True	AATATA	-16
PB.4239.9	chr16	+	3504	16	novel_in_catalog	ATF7IP2	novel	450	5	NA	NA	0	-500	combination_of_known_junctions	FALSE	canonical	1	5160	junction_3	52054.765197775654	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	568	2616	20.0	0	True	NA	NA
PB.4239.8	chr16	+	3225	12	full-splice_match	ATF7IP2	ENST00000396560.6	3665	12	3	437	0	-436	multi-exon	FALSE	canonical	1	5344	junction_1	18320.147132560855	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	225	2273	50.0	-3	True	AATAAA	-20
PB.888.1	chr1	+	3156	18	full-splice_match	DDR2	ENST00000446985.6	2998	18	-121	-37	-121	26	multi-exon	FALSE	canonical	1	6140	junction_1	49241.90447064566	NA	3	NA	TRUE	NA	NA	NA	C	coding	855	2568	388	2955	80.0	-1312	False	ATTAAA	-6
PB.4239.1	chr16	+	3664	12	full-splice_match	ATF7IP2	ENST00000396560.6	3665	12	3	-2	0	2	multi-exon	FALSE	canonical	1	5344	junction_1	18320.147132560855	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	225	2273	15.0	-3	True	AATAAA	-19
PB.4239.3	chr16	+	3861	15	novel_in_catalog	ATF7IP2	novel	450	5	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	4760	junction_1	20554.64671346375	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	425	2473	15.0	-4	True	AATAAA	-16
PB.4239.2	chr16	+	3934	13	novel_not_in_catalog	ATF7IP2	novel	450	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	745	junction_2	20705.16958445	NA	2	1	TRUE	NA	NA	NA	C	coding	682	2049	498	2546	15.0	-6	True	AATAAA	-16
PB.4239.5	chr16	+	3745	14	novel_in_catalog	ATF7IP2	novel	450	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	3727	junction_1	20140.11537135767	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	307	2355	10.0	-3	True	AATAAA	-18
PB.4239.4	chr16	+	3825	15	novel_not_in_catalog	ATF7IP2	novel	450	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	489	junction_4	21627.88268352797	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	390	2438	15.0	-3	True	AATAAA	-15
PB.4239.7	chr16	+	3503	11	novel_in_catalog	ATF7IP2	novel	450	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5344	junction_1	19648.530709444916	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	225	1421	15.0	-3	True	AATAAA	-16
PB.4239.6	chr16	+	3703	13	novel_in_catalog	ATF7IP2	novel	450	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	4041	junction_1	19622.308835120126	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	268	2316	15.0	-3	True	AATAAA	-15
PB.8038.23	chr3	+	3449	16	full-splice_match	CTNNB1	ENST00000642315.1	2890	16	-19	-540	12	1	multi-exon	FALSE	canonical	1	29546	junction_1	828361.2160587808	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	307	2652	10.0	-3984	False	ATTAAA	-16
PB.888.4	chr1	+	3126	18	full-splice_match	DDR2	ENST00000367921.7	3096	18	-5	-25	0	25	multi-exon	FALSE	canonical	1	71871	junction_1	37348.640679256794	NA	4	NA	TRUE	NA	NA	NA	C	coding	855	2568	359	2926	80.0	1	True	ATTAAA	-5
PB.11044.5	chr8	+	2076	10	full-splice_match	PPP2R2A	ENST00000380737.7	3940	10	137	1727	14	67	multi-exon	FALSE	canonical	1	357623	junction_1	142144.80595331712	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	193	1536	75.0	2	True	NA	NA
PB.9303.1	chr5	+	2979	2	full-splice_match	F2RL1	ENST00000296677.4	2914	2	-66	1	-22	-1	multi-exon	FALSE	canonical	1	121781	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	397	1194	273	1466	10.0	-202	False	TATAAA	-24
PB.10806.3	chr7	-	2441	7	novel_in_catalog	TSPAN12	novel	2798	8	NA	NA	245	-3	no_combination_of_known_junctions	FALSE	canonical	1	3184	junction_3	39852.55595176913	NA	0	NA	TRUE	NA	NA	NA	B	coding	280	843	330	1172	20.0	58	True	AATAAA	-15
PB.3818.10	chr15	+	3154	19	novel_in_catalog	TUBGCP4	novel	544	4	NA	NA	-10	467	combination_of_known_junctions	FALSE	canonical	1	17935	junction_13	54035.34834716993	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	265	1698	100.0	-10	True	NA	NA
PB.8779.4	chr4	+	2110	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-70	-2	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	233560.91378880024	NA	1	1	TRUE	NA	NA	NA	C	coding	558	1677	267	1943	30.0	-181	False	AATAAA	-25
PB.3990.1	chr15	+	2888	1	full-splice_match	AC068338.2	ENST00000563278.1	1430	1	-79	-1379	-79	1379	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	144	435	3	437	90.0	-31	False	NA	NA
PB.8978.7	chr4	+	2773	12	novel_in_catalog	ABHD18	novel	2177	11	NA	NA	-24	832	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	50917.32466808692	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	455	1468	100.0	-14	True	NA	NA
PB.5802.1	chr19	+	2707	9	novel_in_catalog	C19orf44	novel	3427	9	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	12862	junction_8	9260.442381947798	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	77	2050	20.0	-31	True	AGTAAA	-31
PB.11044.2	chr8	+	3428	10	full-splice_match	PPP2R2A	ENST00000380737.7	3940	10	17	495	17	-495	multi-exon	FALSE	canonical	1	357623	junction_1	142144.80595331712	NA	2	NA	TRUE	NA	NA	NA	C	coding	447	1344	313	1656	35.0	-20	True	AATAAA	-38
PB.8978.6	chr4	+	2043	12	novel_in_catalog	ABHD18	novel	2177	11	NA	NA	4	33	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	50917.32466808692	NA	5	NA	TRUE	NA	NA	NA	C	coding	337	1014	524	1537	40.0	-83	False	AATAAA	-15
PB.10806.7	chr7	-	2559	9	novel_in_catalog	TSPAN12	novel	2798	8	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	15209	junction_8	31089.521727585325	NA	3	NA	TRUE	NA	NA	NA	B	coding	305	918	373	1290	20.0	-37	False	AATAAA	-15
PB.8978.5	chr4	+	2948	13	full-splice_match	ABHD18	ENST00000645843.1	5827	13	71	2808	0	833	multi-exon	FALSE	non_canonical	0	0	junction_6	43663.26775925809	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	248	1642	100.0	-87	False	NA	NA
PB.11282.29	chr8	-	9241	59	novel_not_in_catalog	UBR5	novel	10297	59	NA	NA	-30	42	any annotated donor/acceptor	FALSE	canonical	1	11455	junction_17	164421.19567301805	NA	24	3	TRUE	NA	NA	NA	C	coding	2785	8358	486	8843	15.0	-20	True	AATAAA	-13
PB.11282.28	chr8	-	9419	60	novel_in_catalog	UBR5	novel	10297	59	NA	NA	13	42	combination_of_known_junctions	FALSE	canonical	1	16335	junction_3	163485.6836807824	NA	1	NA	TRUE	NA	NA	NA	C	coding	2722	8169	513	8681	15.0	-1	True	AATAAA	-13
PB.8978.4	chr4	+	2438	14	novel_not_in_catalog	ABHD18	novel	2177	11	NA	NA	-3	32	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	53874.30313183484	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	251	1933	35.0	-90	False	AATAAA	-14
PB.9483.16	chr5	+	2914	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	98290	junction_1	947011.9893275534	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	228	1901	25.0	1	True	AATAAA	-21
PB.11282.21	chr8	-	9147	59	full-splice_match	UBR5	ENST00000520539.5	10297	59	258	892	106	42	multi-exon	FALSE	canonical	1	132976	junction_51	154972.57397989754	NA	3	NA	TRUE	NA	NA	NA	C	coding	2799	8400	350	8749	15.0	310	False	AATAAA	-13
PB.8978.3	chr4	+	2351	15	novel_not_in_catalog	ABHD18	novel	2177	11	NA	NA	-10	33	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	62146.861939469396	NA	12	2	TRUE	NA	NA	NA	C	coding	295	888	958	1845	40.0	-97	False	AATAAA	-15
PB.11282.22	chr8	-	9291	59	novel_in_catalog	UBR5	novel	10297	59	NA	NA	31	59	combination_of_known_junctions	FALSE	canonical	1	98900	junction_51	156236.74461675886	NA	0	NA	TRUE	NA	NA	NA	C	coding	2793	8382	495	8876	20.0	165	False	AATAAA	-30
PB.11282.27	chr8	-	9230	59	novel_not_in_catalog	UBR5	novel	10297	59	NA	NA	-21	46	any annotated donor/acceptor	FALSE	canonical	1	12016	junction_36	175863.684021219	NA	12	2	TRUE	NA	NA	NA	C	coding	2783	8352	477	8828	15.0	-11	True	AATAAA	-17
PB.8978.2	chr4	+	2264	14	novel_in_catalog	ABHD18	novel	2177	11	NA	NA	0	33	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	52570.15176249124	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	430	1758	40.0	16	True	AATAAA	-15
PB.10662.5	chr7	+	2157	1	genic	AKAP9	novel	NA	NA	NA	NA	-1	-52691	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	31	96	235	330	85.0	-2	True	NA	NA
PB.10662.4	chr7	+	1239	8	incomplete-splice_match	AKAP9	ENST00000358100.6	10309	37	-234	89699	-1	4870	3prime_fragment	FALSE	canonical	1	172097	junction_1	35899.15482490997	NA	0	NA	TRUE	NA	NA	NA	B	coding	335	1005	235	1239	70.0	-2	True	AATAAA	-43
PB.10662.3	chr7	+	2880	8	incomplete-splice_match	AKAP9	ENST00000358100.6	10309	37	-237	88061	-4	6508	3prime_fragment	FALSE	canonical	1	172097	junction_1	35899.15482490997	NA	0	NA	TRUE	NA	NA	NA	B	coding	881	2643	238	2880	65.0	-5	True	AGTAAA	-20
PB.10662.2	chr7	+	2050	8	incomplete-splice_match	AKAP9	ENST00000358100.6	10309	37	-240	88894	-7	5675	3prime_fragment	TRUE	canonical	1	172097	junction_1	35899.15482490997	NA	1	NA	TRUE	NA	NA	NA	B	coding	603	1809	241	2049	55.0	-8	True	GATAAA	-15
PB.10662.1	chr7	+	2501	8	incomplete-splice_match	AKAP9	ENST00000358100.6	10309	37	-235	88438	-2	6131	3prime_fragment	FALSE	canonical	1	172097	junction_1	35899.15482490997	NA	0	NA	TRUE	NA	NA	NA	B	coding	755	2265	236	2500	70.0	-3	True	AAAACA	-11
PB.11486.1	chr9	+	4747	2	intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3631	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.10056.1	chr6	+	2806	1	incomplete-splice_match	OGFRL1	ENST00000370435.4	8391	7	17336	6	14777	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	18	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	1517	False	ATTAAA	-19
PB.2619.1	chr12	+	3478	7	novel_in_catalog	NR4A1	novel	548	3	NA	NA	14	-6	intron_retention	FALSE	canonical	1	51293	junction_1	676113.1232788761	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	2124	2927	30.0	-5953	False	AATAAA	-13
PB.10030.1	chr6	-	7059	11	full-splice_match	TRAM2	ENST00000182527.3	6908	11	-145	-6	-145	6	multi-exon	TRUE	canonical	1	215835	junction_4	34130.645027599465	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	146	1258	25.0	-1	True	AATAAA	-26
PB.2619.3	chr12	+	2483	7	full-splice_match	NR4A1	ENST00000394825.5	2528	7	40	5	0	0	multi-exon	FALSE	canonical	1	515953	junction_1	415877.29193423816	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	130	1926	25.0	0	True	AATAAA	-19
PB.2619.2	chr12	+	3308	6	novel_in_catalog	NR4A1	novel	548	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	515953	junction_1	446167.8221008771	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	1948	2751	25.0	0	True	AATAAA	-19
PB.10030.4	chr6	-	3908	11	full-splice_match	TRAM2	ENST00000182527.3	6908	11	-144	3144	-144	-3144	multi-exon	FALSE	canonical	1	215835	junction_4	34130.645027599465	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	145	1257	95.0	0	True	NA	NA
PB.2619.4	chr12	+	2631	8	full-splice_match	NR4A1	ENST00000243050.5	2678	8	42	5	2	0	multi-exon	FALSE	canonical	1	51293	junction_1	626087.0632245183	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	380	2074	25.0	2	True	AATAAA	-19
PB.10030.6	chr6	-	2865	12	novel_not_in_catalog	TRAM2	novel	6908	11	NA	NA	-144	-3144	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	86986.48301520973	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	145	1257	95.0	0	True	NA	NA
PB.10030.7	chr6	-	1968	1	incomplete-splice_match	TRAM2	ENST00000182527.3	6908	11	74402	3144	74402	-3144	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	5105	False	NA	NA
PB.8184.2	chr3	-	5173	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	23	-1567	23	1567	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	5	NA	TRUE	NA	NA	NA	C	coding	624	1875	79	1953	30.0	0	True	ATTAAA	-41
PB.8184.3	chr3	-	4843	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	52	-1266	52	1266	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	5	NA	TRUE	NA	NA	NA	C	coding	624	1875	50	1924	25.0	1	True	AATAGA	-15
PB.8184.1	chr3	-	3980	14	novel_not_in_catalog	ACTR8	novel	3629	13	NA	NA	23	4028	any annotated donor/acceptor	FALSE	canonical	1	35945	junction_1	70267.28869894292	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	79	1953	25.0	0	True	NA	NA
PB.8184.6	chr3	-	3423	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	50	156	50	-156	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	52	1926	30.0	-1	True	AATATA	-24
PB.8184.7	chr3	-	3313	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	50	266	50	-266	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	52	1926	35.0	-1	True	TTTAAA	-16
PB.8184.4	chr3	-	4175	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	20	-566	20	566	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	4	NA	TRUE	NA	NA	NA	C	coding	624	1875	82	1956	85.0	-3	True	NA	NA
PB.8184.5	chr3	-	3599	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	48	-18	48	18	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	54	1928	35.0	-3	True	ATTAAA	-19
PB.10223.10	chr6	-	2815	11	novel_in_catalog	SGK1	novel	3201	14	NA	NA	0	-11	intron_retention	FALSE	canonical	1	607702	junction_2	182650.04033147654	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	55	951	50.0	2	True	AATAAA	-7
PB.10223.11	chr6	-	2605	11	novel_in_catalog	SGK1	novel	3201	14	NA	NA	1	-11	intron_retention	FALSE	canonical	1	607702	junction_2	191131.50027674664	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	57	746	50.0	0	True	AATAAA	-7
PB.6521.3	chr2	+	4640	10	full-splice_match	APLF	ENST00000303795.8	3847	10	35	-828	-7	828	multi-exon	FALSE	canonical	1	14169	junction_1	13360.51557924356	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	137	1672	30.0	11	True	AATAAA	-17
PB.6521.2	chr2	+	2342	10	full-splice_match	APLF	ENST00000303795.8	3847	10	24	1481	13	-576	multi-exon	FALSE	canonical	1	14169	junction_1	13360.51557924356	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	148	1683	75.0	0	True	NA	NA
PB.6521.1	chr2	+	3655	10	full-splice_match	APLF	ENST00000303795.8	3847	10	-2	194	-2	-194	multi-exon	FALSE	canonical	1	14169	junction_1	13360.51557924356	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	174	1709	55.0	-26	True	NA	NA
PB.495.1	chr1	-	1762	3	full-splice_match	AL157944.1	ENST00000420549.2	835	3	166	-1093	166	1093	multi-exon	FALSE	canonical	1	351	junction_2	508.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-24
PB.10828.31	chr7	+	1984	7	full-splice_match	CALU	ENST00000249364.8	3357	7	30	1343	9	195	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	73	1020	25.0	1	True	ATTAAA	-19
PB.2327.2	chr11	+	2098	14	novel_not_in_catalog	POU2F3	novel	2903	13	NA	NA	5478	-5	any annotated donor/acceptor	FALSE	canonical	1	3330	junction_1	6988.054616661477	NA	1	NA	TRUE	NA	NA	NA	B	coding	432	1299	313	1611	20.0	-17	False	NA	NA
PB.2327.1	chr11	+	2561	14	novel_not_in_catalog	POU2F3	novel	2903	13	NA	NA	5463	-4	any annotated donor/acceptor	FALSE	canonical	1	3330	junction_1	6988.054616661477	NA	0	NA	TRUE	NA	NA	NA	B	coding	432	1299	328	1626	35.0	-32	False	NA	NA
PB.10828.32	chr7	+	1530	8	novel_in_catalog	CALU	novel	3210	6	NA	NA	14	368	combination_of_known_junctions	FALSE	canonical	1	36804	junction_7	859748.7710536403	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	68	1015	75.0	6	True	NA	NA
PB.10828.35	chr7	+	2918	5	novel_not_in_catalog	CALU	novel	3210	6	NA	NA	-4310	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1133692.4422323224	NA	6	1	TRUE	NA	NA	NA	C	coding	200	603	8	610	20.0	-7735	False	AATAAA	-16
PB.991.3	chr1	+	2939	7	full-splice_match	RNF2	ENST00000367510.7	3606	7	125	542	-37	-542	multi-exon	FALSE	canonical	1	78096	junction_5	82980.27115659614	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	164	1174	35.0	0	True	ATTAAA	-28
PB.8408.17	chr3	-	4533	28	novel_not_in_catalog	TOPBP1	novel	618	2	NA	NA	-19	-712	any annotated donor/acceptor	FALSE	canonical	1	12500	junction_7	124915.88679182346	NA	3	NA	TRUE	NA	NA	NA	C	coding	748	2247	1375	3621	75.0	8	True	NA	NA
PB.8408.16	chr3	-	4740	28	full-splice_match	TOPBP1	ENST00000642236.1	6152	28	398	1014	-89	-712	multi-exon	FALSE	canonical	1	77129	junction_21	106044.77219021771	NA	1	NA	TRUE	NA	NA	NA	C	coding	1506	4518	222	4739	75.0	-62	True	NA	NA
PB.8408.15	chr3	-	4693	28	full-splice_match	TOPBP1	ENST00000260810.9	5378	28	-27	712	-27	-712	multi-exon	FALSE	canonical	1	109338	junction_27	98055.8777385677	NA	2	NA	TRUE	NA	NA	NA	C	coding	1511	4533	160	4692	75.0	0	True	NA	NA
PB.8408.14	chr3	-	4976	28	full-splice_match	TOPBP1	ENST00000642236.1	6152	28	401	775	-86	-473	multi-exon	FALSE	canonical	1	77129	junction_21	106044.77219021771	NA	0	NA	TRUE	NA	NA	NA	C	coding	1517	4554	219	4772	70.0	-59	True	AATAAA	-11
PB.8408.13	chr3	-	5001	28	full-splice_match	TOPBP1	ENST00000260810.9	5378	28	-86	463	-86	-463	multi-exon	FALSE	canonical	1	109338	junction_27	98055.8777385677	NA	0	NA	TRUE	NA	NA	NA	C	coding	1522	4569	219	4787	45.0	-59	True	AATAAA	-21
PB.8408.12	chr3	-	5042	27	novel_in_catalog	TOPBP1	novel	618	2	NA	NA	-47	-80	no_combination_of_known_junctions	FALSE	canonical	1	11236	junction_7	127405.36283649335	NA	2	NA	TRUE	NA	NA	NA	C	coding	691	2076	1403	3478	40.0	-20	True	AATAAA	-19
PB.8408.11	chr3	-	5113	27	novel_not_in_catalog	TOPBP1	novel	618	2	NA	NA	-56	-80	any annotated donor/acceptor	FALSE	canonical	1	5665	junction_26	130447.69610799241	NA	0	NA	TRUE	NA	NA	NA	C	coding	1121	3366	184	3549	40.0	-29	True	AATAAA	-19
PB.8408.10	chr3	-	5228	28	novel_in_catalog	TOPBP1	novel	618	2	NA	NA	-12	-80	combination_of_known_junctions	FALSE	canonical	1	16772	junction_21	111730.84946844814	NA	11	1	TRUE	NA	NA	NA	C	coding	1087	3264	1368	4631	40.0	15	True	AATAAA	-19
PB.3624.10	chr14	+	3022	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	32	9981	-3	918	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	254	2602	75.0	-15	True	NA	NA
PB.3624.11	chr14	+	2771	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	32	10232	-3	667	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	254	2602	30.0	-15	True	TATAAA	-24
PB.3624.12	chr14	+	3044	16	novel_not_in_catalog	CPSF2	novel	13035	16	NA	NA	-2	918	any annotated donor/acceptor	FALSE	canonical	1	894	junction_3	165665.02045505363	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	552	2624	75.0	-14	True	NA	NA
PB.3624.13	chr14	+	2614	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	33	10388	-2	511	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	253	2601	30.0	-14	True	TATAAA	-13
PB.3624.14	chr14	+	2195	14	incomplete-splice_match	CPSF2	ENST00000298875.8	13035	16	35	13039	0	-2140	3prime_fragment	FALSE	canonical	1	250220	junction_1	88086.61434368188	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	251	2194	55.0	-12	True	NA	NA
PB.3624.15	chr14	+	3405	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	48	9582	0	1317	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	238	2586	20.0	1	True	AAGAAA	-19
PB.3624.16	chr14	+	5889	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	48	7098	0	3801	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	238	2586	30.0	1	True	NA	NA
PB.8408.18	chr3	-	4999	21	novel_in_catalog	TOPBP1	novel	6152	28	NA	NA	-52	-169	intron_retention	FALSE	canonical	1	109338	junction_20	82273.43377549037	NA	0	NA	TRUE	NA	NA	NA	C	coding	1215	3648	185	3832	40.0	-25	True	AGTAAA	-11
PB.5994.2	chr19	+	4024	5	novel_in_catalog	LGALS17A	novel	2562	6	NA	NA	0	10023	intron_retention	FALSE	canonical	1	3885	junction_3	8625.788963915127	NA	2	NA	TRUE	NA	NA	NA	B	coding	123	372	47	418	5.0	2	True	ATTAAA	-20
PB.6155.6	chr19	-	3191	2	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	7	-10860	intron_retention	FALSE	canonical	1	23632	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	522	1569	214	1782	40.0	-11	True	AATAAA	-14
PB.8435.11	chr3	+	6756	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	-83	514	intron_retention	FALSE	canonical	1	6166	junction_3	41611.4589528834	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	453	4031	30.0	-4742	False	ATTAAA	-16
PB.5994.1	chr19	+	3983	6	novel_not_in_catalog	LGALS17A	novel	2562	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_5	10904.591664065189	NA	3	NA	TRUE	NA	NA	NA	B	coding	123	372	49	420	35.0	0	True	AATGAA	-12
PB.8435.17	chr3	+	4058	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	-3	83	combination_of_known_junctions	FALSE	canonical	1	6166	junction_3	41611.4589528834	NA	3	NA	TRUE	NA	NA	NA	C	coding	1192	3579	373	3951	75.0	-4	True	NA	NA
PB.8435.16	chr3	+	6757	4	full-splice_match	ZBTB38	ENST00000507722.5	593	4	-3	-6161	-3	718	multi-exon	FALSE	canonical	1	17194	junction_1	75182.85090069115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	241	3828	20.0	-4	True	AATAAA	-17
PB.8435.15	chr3	+	6798	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	-3	514	intron_retention	FALSE	canonical	1	17194	junction_1	76319.12501914248	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	486	4073	30.0	-4	True	ATTAAA	-16
PB.3665.29	chr14	-	1797	10	full-splice_match	WARS	ENST00000358655.8	2466	10	-2	671	-2	6	multi-exon	FALSE	canonical	1	91545	junction_9	701789.6795248243	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	103	1395	35.0	-27	True	AATATA	-22
PB.3665.26	chr14	-	1938	11	full-splice_match	WARS	ENST00000355338.6	3092	11	494	660	0	1	multi-exon	FALSE	canonical	1	439719	junction_10	591162.4981120588	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	126	1541	40.0	-1	True	AATATA	-17
PB.8435.19	chr3	+	6649	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	2	517	intron_retention	FALSE	canonical	1	14260	junction_3	39579.10035849097	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	343	3921	25.0	1	True	ATTAAA	-19
PB.3665.25	chr14	-	1928	11	novel_not_in_catalog	WARS	novel	2938	11	NA	NA	0	123	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	862804.9815904171	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	117	1409	35.0	-33	True	AAAAAG	-13
PB.3665.22	chr14	-	2106	11	full-splice_match	WARS	ENST00000355338.6	3092	11	479	507	4	154	multi-exon	FALSE	canonical	1	439719	junction_10	591162.4981120588	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	141	1556	25.0	-16	True	AGTAAA	-29
PB.3665.23	chr14	-	2316	12	novel_in_catalog	WARS	novel	2938	11	NA	NA	6	147	intron_retention	FALSE	canonical	1	4810	junction_11	734308.7725295591	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	358	1773	45.0	31	True	AGTAAA	-22
PB.3665.20	chr14	-	2736	12	novel_not_in_catalog	WARS	novel	2938	11	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	841313.290916525	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	237	1652	5.0	-1	True	AATAAA	-15
PB.3665.21	chr14	-	2496	10	novel_in_catalog	WARS	novel	2938	11	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	4126	junction_1	700305.9634751368	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	139	1413	5.0	-1	True	AATAAA	-14
PB.4627.4	chr16	-	4377	42	novel_in_catalog	FANCA	novel	5451	43	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	37622	junction_13	50240.20565654225	NA	1	NA	TRUE	NA	NA	NA	C	coding	1412	4239	41	4279	10.0	-9	True	AAAAAG	-14
PB.4627.5	chr16	-	1613	11	full-splice_match	FANCA	ENST00000389302.7	1641	11	14	14	3	-3	multi-exon	FALSE	canonical	1	61812	junction_1	47968.053402655394	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	29	922	50.0	3	True	ATTAAA	-29
PB.1742.3	chr11	-	1959	11	full-splice_match	RNH1	ENST00000354420.6	1894	11	-26	-39	6	0	multi-exon	FALSE	canonical	1	63097	junction_10	686038.158596335	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	396	1781	10.0	-16	True	ATTAAA	-17
PB.1742.2	chr11	-	2012	11	full-splice_match	RNH1	ENST00000397615.6	2014	11	1	1	1	0	multi-exon	FALSE	canonical	1	165117	junction_10	666215.9344088447	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	452	1837	15.0	-32	True	ATTAAA	-14
PB.1742.5	chr11	-	1769	10	full-splice_match	RNH1	ENST00000356187.9	1791	10	70	-48	-3	0	multi-exon	FALSE	canonical	1	317096	junction_9	540085.580868234	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	206	1591	10.0	1	True	ATTAAA	-17
PB.4627.1	chr16	-	5449	43	full-splice_match	FANCA	ENST00000389301.7	5451	43	0	2	0	-2	multi-exon	TRUE	canonical	1	82303	junction_42	46063.54998494999	NA	2	NA	TRUE	NA	NA	NA	C	coding	1455	4368	32	4399	25.0	0	True	AAGAAA	-21
PB.4627.2	chr16	-	4527	43	full-splice_match	FANCA	ENST00000389301.7	5451	43	-10	934	-1	10	multi-exon	FALSE	canonical	1	82303	junction_42	46063.54998494999	NA	0	NA	TRUE	NA	NA	NA	C	coding	1455	4368	42	4409	45.0	-10	True	AAAAAG	-34
PB.4627.3	chr16	-	4491	43	novel_in_catalog	FANCA	novel	5451	43	NA	NA	2	9	no_combination_of_known_junctions	FALSE	canonical	1	7480	junction_3	51038.409775774846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1415	4248	30	4277	45.0	2	True	AAAAAG	-33
PB.1742.9	chr11	-	1893	11	full-splice_match	RNH1	ENST00000533410.5	1829	11	-34	-30	1	0	multi-exon	FALSE	canonical	1	63097	junction_10	680485.0687923211	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	333	1718	15.0	-21	True	ATTAAA	-14
PB.1742.8	chr11	-	1949	11	novel_in_catalog	RNH1	novel	2973	9	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	165117	junction_10	660442.976125638	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	390	1775	15.0	-38	True	ATTAAA	-13
PB.104.1	chr1	+	4368	7	novel_in_catalog	PRDM2	novel	628	6	NA	NA	-10	3427	no_combination_of_known_junctions	FALSE	canonical	1	2965	junction_1	67557.57625598577	NA	4	NA	TRUE	NA	NA	NA	C	coding	1347	4041	327	4367	60.0	0	True	ATTAAA	-6
PB.5722.1	chr19	-	1381	2	full-splice_match	TMEM205	ENST00000585722.1	1147	2	-232	-2	-2	0	multi-exon	TRUE	canonical	1	1467355	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	176	531	812	1342	0.0	-21	True	AATAAA	-17
PB.7225.16	chr20	+	2566	7	incomplete-splice_match	HM13	ENST00000469097.5	801	8	2366	-138	-12	-11	5prime_fragment	FALSE	canonical	1	112132	junction_6	790909.7241867888	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	1554	2135	15.0	-23	True	ATTAAA	-31
PB.11220.4	chr8	-	2918	10	novel_in_catalog	RMDN1	novel	898	5	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	17405	junction_9	145222.30668832024	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	148	960	20.0	-29	False	NA	NA
PB.6338.24	chr2	-	4917	20	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	-23	166	any annotated donor/acceptor	FALSE	canonical	1	122609	junction_5	216480.6338123843	NA	6	2	TRUE	NA	NA	NA	C	coding	987	2964	67	3030	35.0	2	True	ACTAAA	-24
PB.7225.14	chr20	+	2673	8	incomplete-splice_match	HM13	ENST00000492709.5	1248	10	9186	3	-1	-3	5prime_fragment	FALSE	canonical	1	1621714	junction_3	293251.0869777513	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	1567	2328	30.0	-36	True	ATTAAA	-39
PB.6535.1	chr2	-	4669	12	full-splice_match	TIA1	ENST00000415783.6	4633	12	-38	2	-38	-2	multi-exon	FALSE	canonical	1	80459	junction_8	188716.3597837149	NA	3	NA	TRUE	NA	NA	NA	C	coding	375	1128	269	1396	25.0	-1	True	AATAAA	-23
PB.6535.2	chr2	-	4642	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	3	2	2	-2	multi-exon	TRUE	canonical	1	291783	junction_8	141853.3172032871	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	209	1369	25.0	-24	True	AATAAA	-23
PB.6535.3	chr2	-	4052	13	novel_in_catalog	C2orf42	novel	579	2	NA	NA	-63	-27365	no_combination_of_known_junctions	FALSE	canonical	1	105949	junction_2	211932.34843321267	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	249	893	15.0	19	True	ATTAAA	-20
PB.6535.4	chr2	-	3877	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	8	762	7	-2	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	204	1364	15.0	-19	True	ATTAAA	-20
PB.6535.5	chr2	-	3829	12	full-splice_match	TIA1	ENST00000415783.6	4633	12	42	762	4	-2	multi-exon	FALSE	canonical	1	80459	junction_8	188716.3597837149	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	189	1316	15.0	-4	True	ATTAAA	-20
PB.6535.6	chr2	-	5191	12	novel_in_catalog	C2orf42	novel	579	2	NA	NA	37	-27365	intron_retention	FALSE	canonical	1	167808	junction_5	171235.2053283282	NA	3	NA	TRUE	NA	NA	NA	C	coding	146	441	2238	2678	15.0	-1	True	ATTAAA	-20
PB.8183.8	chr3	+	2842	10	full-splice_match	IL17RB	ENST00000475124.1	2822	10	-16	-4	-12	4	multi-exon	FALSE	canonical	1	66893	junction_5	29864.55897696949	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	22	888	35.0	0	True	AATAAA	-13
PB.6535.8	chr2	-	5120	12	novel_in_catalog	C2orf42	novel	579	2	NA	NA	-26	-27366	intron_retention	FALSE	canonical	1	391939	junction_7	120734.61478756135	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	1868	2608	15.0	-27	True	ATTAAA	-19
PB.6535.9	chr2	-	3409	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	-49	1287	-30	-527	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	261	1421	15.0	7	True	AATAAA	-19
PB.11349.11	chr8	-	1693	7	novel_not_in_catalog	ZFAT	novel	4273	14	NA	NA	-7032	0	any annotated donor/acceptor	FALSE	canonical	1	5376	junction_6	69928.61892136867	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	224	1003	15.0	-7032	False	AATAAA	-14
PB.11220.8	chr8	-	2255	10	full-splice_match	RMDN1	ENST00000406452.7	3063	10	18	790	18	-787	multi-exon	FALSE	canonical	1	371913	junction_6	50684.12393332738	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	143	1087	25.0	5594	False	AAAAAG	-14
PB.8061.9	chr3	-	3850	3	full-splice_match	KIAA1143	ENST00000296121.5	5122	3	47	1225	47	-1225	multi-exon	FALSE	canonical	1	334	junction_2	32300.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	14	478	70.0	3	True	NA	NA
PB.11220.9	chr8	-	2783	9	novel_in_catalog	RMDN1	novel	898	5	NA	NA	7	-4	intron_retention	FALSE	canonical	1	371913	junction_5	53629.73383301469	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	49	786	40.0	-14	True	AATAAA	-22
PB.6805.3	chr2	+	2102	8	novel_not_in_catalog	TANK	novel	2152	8	NA	NA	-8	3	any annotated donor/acceptor	FALSE	canonical	1	879	junction_1	194740.77778987144	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	168	1445	20.0	-8	True	ATTAAA	-16
PB.11642.8	chr9	+	5077	14	full-splice_match	SYK	ENST00000375746.1	4990	14	-87	0	-87	0	multi-exon	FALSE	canonical	1	17206	junction_1	99168.86310541884	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	221	2128	15.0	-22	True	AATAAA	-14
PB.3805.7	chr15	+	1220	10	full-splice_match	CAPN3	ENST00000397204.8	1237	10	17	0	17	0	multi-exon	FALSE	canonical	1	5471	junction_2	149369.58903792306	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	208	678	0.0	0	True	AATAAA	-18
PB.3805.6	chr15	+	4651	9	novel_in_catalog	AC012651.1	novel	3223	27	NA	NA	56674	-1	intron_retention	FALSE	canonical	1	29699	junction_1	116094.3840922118	NA	3	NA	TRUE	NA	NA	NA	B	coding	156	471	3638	4108	0.0	13	True	AATAAA	-19
PB.3805.5	chr15	+	1418	11	full-splice_match	CAPN3	ENST00000569136.5	1029	11	-14	-375	-13	0	multi-exon	FALSE	canonical	1	26140	junction_2	139473.41031999612	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	404	874	0.0	2	True	AATAAA	-20
PB.3805.4	chr15	+	5633	8	full-splice_match	CAPN3	ENST00000466222.6	1934	8	-3702	3	-15	0	multi-exon	FALSE	canonical	1	330727	junction_7	28080.029246597944	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	4621	5091	0.0	0	True	AATAAA	-18
PB.3805.3	chr15	+	4655	9	incomplete-splice_match	CAPN3	ENST00000357568.7	2669	23	45179	-542	-15	0	5prime_fragment	FALSE	canonical	1	219013	junction_1	56899.688419072205	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	3643	4113	0.0	0	True	AATAAA	-18
PB.3805.2	chr15	+	2399	10	novel_in_catalog	AC012651.1	novel	3223	27	NA	NA	56659	-1	intron_retention	FALSE	canonical	1	26140	junction_2	145027.65071760167	NA	0	NA	TRUE	NA	NA	NA	B	coding	156	471	1386	1856	0.0	-2	True	AATAAA	-19
PB.3805.1	chr15	+	1384	11	novel_not_in_catalog	AC012651.1	novel	3223	27	NA	NA	56622	-1	intron_retention	TRUE	canonical	1	5677	junction_9	160299.7846592752	NA	0	NA	TRUE	NA	NA	NA	B	coding	109	330	445	774	0.0	0	True	AATAAA	-19
PB.2919.13	chr12	+	2241	6	novel_in_catalog	OAS1	novel	1816	6	NA	NA	90	-2	combination_of_known_junctions	FALSE	canonical	1	57766	junction_5	204187.91315981463	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	631	1053	20.0	0	True	NA	NA
PB.5304.3	chr17	-	3675	6	novel_in_catalog	SGSH	novel	565	3	NA	NA	3	-1	intron_retention	FALSE	canonical	1	8311	junction_4	99216.50014911834	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	2111	2506	35.0	2	True	AGTAAA	-22
PB.5304.2	chr17	-	2740	8	full-splice_match	SGSH	ENST00000326317.10	2784	8	26	18	-14	0	multi-exon	FALSE	canonical	1	132624	junction_7	51091.04924643885	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	62	1570	35.0	-15	True	AGTAAA	-23
PB.5304.1	chr17	-	3776	7	novel_in_catalog	SGSH	novel	565	3	NA	NA	9	0	intron_retention	TRUE	canonical	1	132624	junction_6	52682.22215848109	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	39	1106	35.0	8	True	AGTAAA	-23
PB.3559.2	chr14	+	1755	4	full-splice_match	ISCA2	ENST00000556816.5	2626	4	41	830	-4	-830	multi-exon	FALSE	canonical	1	350336	junction_1	12840.426014047285	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	15	479	30.0	-4	True	AGTAAA	-19
PB.5304.7	chr17	-	3640	8	novel_in_catalog	SGSH	novel	565	3	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	15878	junction_1	82465.80228859744	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	59	1066	20.0	-12	True	AGTAAA	-14
PB.5304.6	chr17	-	4057	6	novel_not_in_catalog	SGSH	novel	565	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	2989	junction_4	91587.05376329125	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	48	863	20.0	-1	True	AGTAAA	-15
PB.5304.5	chr17	-	2790	9	novel_not_in_catalog	SGSH	novel	565	3	NA	NA	8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	97932.30803181093	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	40	1068	25.0	7	True	AGTAAA	-16
PB.5304.4	chr17	-	3645	6	novel_in_catalog	SGSH	novel	565	3	NA	NA	-15	-4	intron_retention	FALSE	canonical	1	4159	junction_3	87189.26094055391	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	2084	2479	30.0	-16	True	AGTAAA	-19
PB.1557.1	chr10	+	3251	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	-13644	1164	any annotated donor/acceptor	TRUE	canonical	1	4769	junction_1	111028.20262415588	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	584	1717	15.0	-26	False	AATAAA	-20
PB.5439.1	chr18	+	3569	8	full-splice_match	RNF138	ENST00000261593.7	3570	8	1	0	1	0	multi-exon	FALSE	canonical	1	55586	junction_3	42399.456749985344	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	458	1195	30.0	-46	True	ATTAAA	-16
PB.1557.3	chr10	+	2100	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	-39	7564	any annotated donor/acceptor	FALSE	canonical	1	12198	junction_9	137769.42901748003	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	8	1456	40.0	-883	False	AATAAA	-10
PB.1557.2	chr10	+	1723	9	incomplete-splice_match	ENTPD1	ENST00000371207.8	1903	10	7	1488	7	-1392	3prime_fragment	FALSE	canonical	1	13420	junction_1	114873.26599561797	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	57	1517	15.0	-21	True	ATTAAA	-20
PB.1557.5	chr10	+	3066	10	full-splice_match	ENTPD1	ENST00000371207.8	1903	10	93	-1256	-2	1157	multi-exon	FALSE	canonical	1	13420	junction_1	108608.49513439556	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	331	1539	20.0	0	True	AATAAA	-13
PB.1557.4	chr10	+	1844	1	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	-84411	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-4	True	NA	NA
PB.1557.7	chr10	+	3672	9	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	-28	-1154	combination_of_known_junctions	FALSE	canonical	1	14385	junction_1	114811.95882010451	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	306	1514	25.0	0	True	AATAAA	-19
PB.1557.6	chr10	+	3729	11	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	-1154	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	132813.22197868704	NA	12	1	TRUE	NA	NA	NA	C	coding	487	1464	108	1571	25.0	2	True	AATAAA	-19
PB.8002.1	chr3	+	1938	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	83	4609	8	6	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	17	1222	35.0	0	True	AAGAAA	-18
PB.8467.11	chr3	+	1990	12	incomplete-splice_match	EIF2A	ENST00000460851.5	2198	14	11692	3	6032	-3	5prime_fragment	FALSE	canonical	1	735725	junction_4	286115.5117825579	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	286	1662	30.0	NA	False	AATGAA	-18
PB.12117.8	chrX	+	7240	13	full-splice_match	MSN	ENST00000360270.6	3944	13	-15	-3281	-15	3281	multi-exon	FALSE	canonical	1	425017	junction_2	545890.7030594014	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	188	1921	35.0	1	True	NA	NA
PB.12117.9	chrX	+	4064	14	novel_not_in_catalog	MSN	novel	568	4	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	8094	junction_1	697910.8686006991	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	327	2027	25.0	1	True	AATAAA	-16
PB.8002.5	chr3	+	5691	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	4	935	4	-935	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	96	1301	30.0	0	True	AATAAA	-29
PB.8002.4	chr3	+	1797	5	novel_in_catalog	CRTAP	novel	6630	7	NA	NA	-1	11	no_combination_of_known_junctions	FALSE	canonical	1	4134	junction_4	635242.4994179389	NA	5	NA	TRUE	NA	NA	NA	C	coding	315	948	101	1048	20.0	-5	True	AAGAAA	-23
PB.4913.8	chr17	+	2459	15	novel_in_catalog	AP2B1	novel	552	5	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	1	34677	junction_14	187829.88247707562	NA	4	NA	TRUE	NA	NA	NA	C	coding	733	2202	117	2318	45.0	14	True	AATAAA	-21
PB.4913.9	chr17	+	3549	23	novel_not_in_catalog	AP2B1	novel	552	5	NA	NA	-16	3	any annotated donor/acceptor	FALSE	canonical	1	3444	junction_22	263396.01573916123	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	155	2959	20.0	-24	True	ATTAAA	-28
PB.4913.6	chr17	+	3665	21	full-splice_match	AP2B1	ENST00000621914.4	5702	21	9	2028	9	290	multi-exon	FALSE	canonical	1	29255	junction_14	246288.0834572544	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	170	2983	25.0	-39	True	NA	NA
PB.4913.7	chr17	+	5662	22	full-splice_match	AP2B1	ENST00000610402.4	3204	22	34	-2492	-11	0	multi-exon	FALSE	canonical	1	185824	junction_7	225110.82043284838	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	97	2952	35.0	-172	False	AATAAA	-14
PB.4913.4	chr17	+	3364	22	full-splice_match	AP2B1	ENST00000610402.4	3204	22	9	-169	9	0	multi-exon	FALSE	canonical	1	185824	junction_7	225110.82043284838	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	122	2977	30.0	9	True	ATTAAA	-20
PB.4913.5	chr17	+	3700	22	full-splice_match	AP2B1	ENST00000610402.4	3204	22	-39	-457	9	283	multi-exon	TRUE	canonical	1	185824	junction_7	225110.82043284838	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	170	3025	20.0	-39	True	NA	NA
PB.4913.2	chr17	+	5715	21	full-splice_match	AP2B1	ENST00000621914.4	5702	21	-10	-3	-10	3	multi-exon	FALSE	canonical	1	29255	junction_14	246288.0834572544	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	189	3002	25.0	-58	True	AATAAA	-17
PB.4913.3	chr17	+	5806	22	novel_not_in_catalog	AP2B1	novel	552	5	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	24817	junction_18	274833.42855845846	NA	1	NA	TRUE	NA	NA	NA	C	coding	969	2910	187	3096	35.0	-56	True	AATAAA	-14
PB.12117.4	chrX	+	4174	15	novel_not_in_catalog	MSN	novel	568	4	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	5686	junction_2	739287.931996867	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	437	2137	25.0	0	True	AATAAA	-16
PB.4913.1	chr17	+	3322	21	full-splice_match	AP2B1	ENST00000621914.4	5702	21	57	2323	9	0	multi-exon	FALSE	canonical	1	29255	junction_14	246288.0834572544	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	122	2935	30.0	9	True	ATTAAA	-20
PB.9420.9	chr5	+	2797	5	full-splice_match	PHAX	ENST00000297540.4	4288	5	670	821	13	-821	multi-exon	FALSE	canonical	1	334636	junction_4	41985.22598486282	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	26	1210	80.0	-9	True	NA	NA
PB.8061.2	chr3	-	4605	4	novel_not_in_catalog	KIAA1143	novel	507	4	NA	NA	8	-8	any annotated donor/acceptor	FALSE	canonical	1	204	junction_1	30483.419536965775	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	53	517	40.0	7	True	NA	NA
PB.3926.3	chr15	-	2819	2	full-splice_match	PIF1	ENST00000560504.1	1114	2	-29	-1676	-7	0	multi-exon	FALSE	canonical	1	37378	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	195	588	74	661	100.0	-22	True	NA	NA
PB.3926.2	chr15	-	2649	13	full-splice_match	PIF1	ENST00000268043.8	2687	13	32	6	3	-1	multi-exon	FALSE	canonical	1	35264	junction_9	38307.55505001229	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	64	1989	25.0	-12	True	AATAAA	-14
PB.3926.1	chr15	-	2684	13	novel_in_catalog	PIF1	novel	2687	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	35264	junction_9	39297.87909132488	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	65	1273	25.0	-13	True	AATAAA	-15
PB.8061.3	chr3	-	4533	4	novel_not_in_catalog	KIAA1143	novel	507	4	NA	NA	-10	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	30531.761080335124	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	71	535	40.0	-11	False	NA	NA
PB.11555.3	chr9	-	2964	16	incomplete-splice_match	CNTNAP3	ENST00000297668.10	5064	24	-291	30914	-114	0	3prime_fragment	FALSE	canonical	1	41	junction_6	20612.700663641554	NA	5	NA	TRUE	NA	NA	NA	C	coding	866	2598	366	2963	45.0	NA	False	AATAAA	-12
PB.8495.1	chr3	+	2167	9	novel_not_in_catalog	IQCJ-SCHIP1	novel	429	4	NA	NA	-31360	-3	any annotated donor/acceptor	FALSE	canonical	1	963	junction_1	220731.21308020616	NA	1	NA	TRUE	NA	NA	NA	B	coding	460	1383	196	1578	20.0	-32	True	AATAAA	-23
PB.8495.3	chr3	+	2007	8	novel_in_catalog	IQCJ-SCHIP1	novel	429	4	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	42645	junction_1	187379.44528181967	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1383	39	1421	20.0	0	True	AATAAA	-20
PB.8092.1	chr3	-	3524	14	full-splice_match	PFKFB4	ENST00000232375.7	3586	14	53	9	53	-9	multi-exon	FALSE	canonical	1	126644	junction_13	38641.191619349855	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	61	1470	45.0	-4	True	AATAAA	-9
PB.8495.5	chr3	+	2131	8	novel_in_catalog	IQCJ-SCHIP1	novel	429	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	8775	junction_1	196025.03027763302	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1383	165	1547	20.0	0	True	AATAAA	-18
PB.8495.4	chr3	+	3016	7	novel_in_catalog	IQCJ-SCHIP1	novel	429	4	NA	NA	-106	2	intron_retention	FALSE	canonical	1	42645	junction_1	191580.50328205517	NA	0	NA	TRUE	NA	NA	NA	B	coding	376	1131	134	1264	20.0	-438	False	AATAAA	-20
PB.9013.6	chr4	-	4171	14	novel_in_catalog	ZNF827	novel	7463	15	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	1	21546	junction_1	31524.487510955707	NA	0	NA	TRUE	NA	NA	NA	C	coding	1349	4050	88	4137	90.0	11	True	NA	NA
PB.9355.16	chr5	+	2692	31	novel_in_catalog	CAST	novel	864	12	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	178	2487	35.0	-38	True	AAGAAA	-25
PB.1836.9	chr11	+	3521	3	full-splice_match	C11orf58	ENST00000525256.1	762	3	-12	-2747	3	2747	multi-exon	FALSE	canonical	1	926149	junction_1	85951.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-11	True	NA	NA
PB.1836.8	chr11	+	1412	4	full-splice_match	C11orf58	ENST00000525684.1	575	4	-13	-824	1	-332	multi-exon	FALSE	canonical	1	41293	junction_2	426127.6680998574	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-13	True	AATAAA	-15
PB.9416.18	chr5	+	3979	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	199	-272	combination_of_known_junctions	FALSE	canonical	1	65772	junction_1	66229.41761523267	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	360	1607	20.0	12	False	NA	NA
PB.177.11	chr1	+	5812	16	novel_in_catalog	SRRM1	novel	480	5	NA	NA	1	1	intron_retention	FALSE	canonical	1	68130	junction_11	193202.9484138261	NA	2	1	TRUE	NA	NA	NA	C	coding	820	2463	2373	4835	30.0	-29	True	AATAAA	-13
PB.1836.3	chr11	+	1357	5	full-splice_match	C11orf58	ENST00000228136.8	2049	5	235	457	-8	419	multi-exon	FALSE	canonical	1	926149	junction_1	483041.7676063324	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	144	695	40.0	-22	True	GATAAA	-18
PB.4344.1	chr16	-	2856	5	full-splice_match	BOLA2-SMG1P6	ENST00000569622.5	937	5	28	-1947	28	1947	multi-exon	FALSE	canonical	1	778	junction_2	1464.9437702519506	NA	2	NA	TRUE	NA	NA	NA	A	coding	217	654	67	720	35.0	NA	False	AATAAA	-17
PB.4344.2	chr16	-	2660	6	novel_not_in_catalog	SMG1P6	novel	2930	19	NA	NA	-7332	-15483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1507.658847352411	NA	5	1	TRUE	NA	NA	NA	B	coding	193	582	282	863	35.0	NA	False	AATAAA	-17
PB.1099.5	chr1	+	3744	9	novel_in_catalog	SYT14	novel	2997	9	NA	NA	-19	-3	combination_of_known_junctions	FALSE	canonical	1	1929	junction_2	7786.928245463676	NA	20	1	TRUE	NA	NA	NA	C	coding	600	1803	20	1822	50.0	-1	True	AATAAA	-20
PB.4344.4	chr16	-	2552	6	novel_not_in_catalog	SMG1P6	novel	2930	19	NA	NA	-7330	-15483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1520.901390623337	NA	7	1	TRUE	NA	NA	NA	B	coding	217	654	104	757	35.0	NA	False	AATAAA	-17
PB.1836.6	chr11	+	1803	2	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	-1	-7102	any annotated donor/acceptor	FALSE	canonical	1	136	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-15	True	NA	NA
PB.1836.5	chr11	+	2130	6	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	-8	252	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	667558.4944475202	NA	3	1	TRUE	NA	NA	NA	C	coding	183	552	144	695	45.0	-22	True	AGTAAA	-41
PB.1836.4	chr11	+	3258	6	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	-8	1227	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	667558.4944475202	NA	4	1	TRUE	NA	NA	NA	C	coding	183	552	144	695	15.0	-22	True	AATAAA	-19
PB.9381.10	chr5	-	2683	2	novel_not_in_catalog	PJA2	novel	4889	10	NA	NA	80	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	2	True	AATAAA	-26
PB.8346.34	chr3	-	2039	9	incomplete-splice_match	PARP9	ENST00000462315.5	6769	10	55	5266	-7	-5266	3prime_fragment	FALSE	canonical	1	25956	junction_8	144283.9412165622	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1800	240	2039	60.0	14	True	NA	NA
PB.9381.13	chr5	-	4987	11	novel_not_in_catalog	PJA2	novel	4889	10	NA	NA	24	-6	any annotated donor/acceptor	FALSE	canonical	1	867	junction_2	378326.00315024605	NA	7	NA	TRUE	NA	NA	NA	C	coding	709	2130	217	2346	30.0	3	True	AATAAA	-20
PB.9381.14	chr5	-	4987	10	novel_in_catalog	PJA2	novel	4889	10	NA	NA	-63	-8	no_combination_of_known_junctions	FALSE	canonical	1	3233	junction_9	301735.1634820767	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	351	2477	30.0	4190	False	AATAAA	-18
PB.9381.15	chr5	-	5018	11	novel_in_catalog	PJA2	novel	4889	10	NA	NA	-20	-8	no_combination_of_known_junctions	FALSE	canonical	1	3049	junction_10	374972.1543967765	NA	9	NA	TRUE	NA	NA	NA	C	coding	708	2127	382	2508	30.0	3555	False	AATAAA	-18
PB.9381.16	chr5	-	4867	10	novel_not_in_catalog	PJA2	novel	4889	10	NA	NA	11	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	323961.32114707463	NA	139	4	TRUE	NA	NA	NA	C	coding	445	1338	1021	2358	30.0	-10	True	AATAAA	-17
PB.9381.17	chr5	-	4310	10	full-splice_match	PJA2	ENST00000361189.6	4889	10	75	504	75	-500	multi-exon	FALSE	canonical	1	437772	junction_9	178227.70248411282	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	166	2292	75.0	-3	True	AAGAAA	-28
PB.3571.13	chr14	-	2406	5	full-splice_match	TMED10	ENST00000303575.8	4127	5	20	1701	1	767	multi-exon	FALSE	canonical	1	829033	junction_3	295970.3156779409	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	33	692	30.0	-9	True	AGTAAA	-16
PB.4245.1	chr16	-	3465	2	novel_not_in_catalog	DEXI	novel	1393	3	NA	NA	-8	-2278	intron_retention	FALSE	canonical	1	12227	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	102	309	821	1129	50.0	-1	True	AATGAA	-21
PB.3571.11	chr14	-	4041	5	novel_not_in_catalog	TMED10	novel	4127	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	613376.2372241445	NA	23	2	TRUE	NA	NA	NA	C	coding	116	351	278	628	20.0	5	True	AATAAA	-13
PB.3571.10	chr14	-	4082	5	novel_not_in_catalog	TMED10	novel	4127	5	NA	NA	-250	-1	any annotated donor/acceptor	FALSE	canonical	1	1065	junction_4	612968.2470219706	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	318	668	20.0	-279	False	AATAAA	-14
PB.5372.1	chr18	-	1321	1	full-splice_match	LINC00526	ENST00000581067.1	1875	1	558	-4	558	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	554	False	AATAAA	-20
PB.3571.14	chr14	-	1330	5	full-splice_match	TMED10	ENST00000303575.8	4127	5	20	2777	1	109	multi-exon	FALSE	canonical	1	829033	junction_3	295970.3156779409	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	33	692	15.0	-9	True	ATTAAA	-21
PB.8779.28	chr4	+	1905	18	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-38	any annotated donor/acceptor	FALSE	canonical	1	415	junction_13	250361.99422012005	NA	2	1	TRUE	NA	NA	NA	C	coding	393	1182	199	1380	60.0	-2	True	NA	NA
PB.8886.9	chr4	+	2069	13	full-splice_match	PDLIM5	ENST00000317968.8	6083	13	1	4013	1	24	multi-exon	FALSE	canonical	1	359508	junction_7	148693.54131195103	NA	2	NA	TRUE	NA	NA	NA	C	coding	596	1791	136	1926	35.0	-3447	False	AATAAA	-18
PB.8886.8	chr4	+	3138	11	novel_in_catalog	PDLIM5	novel	1960	10	NA	NA	1	240	no_combination_of_known_junctions	FALSE	canonical	1	3057	junction_3	237300.6014611215	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	136	1464	25.0	-3447	False	ATTAAA	-23
PB.8886.5	chr4	+	2571	13	full-splice_match	PDLIM5	ENST00000317968.8	6083	13	-4	3516	-4	521	multi-exon	FALSE	canonical	1	359508	junction_7	148693.54131195103	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	141	1931	60.0	-3452	False	NA	NA
PB.8886.4	chr4	+	3585	13	full-splice_match	PDLIM5	ENST00000317968.8	6083	13	16	2482	-2	240	multi-exon	FALSE	canonical	1	359508	junction_7	148693.54131195103	NA	3	NA	TRUE	NA	NA	NA	C	coding	596	1791	121	1911	25.0	-3432	False	ATTAAA	-23
PB.8886.7	chr4	+	3403	14	novel_not_in_catalog	PDLIM5	novel	1960	10	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	711	junction_2	257086.39311347203	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	379	1989	100.0	-3450	False	NA	NA
PB.8886.6	chr4	+	3247	12	incomplete-splice_match	PDLIM5	ENST00000317968.8	6083	13	3345	2742	2	0	5prime_fragment	FALSE	canonical	1	359508	junction_6	151656.50024124084	NA	7	NA	TRUE	NA	NA	NA	C	coding	596	1791	43	1833	100.0	-103	False	NA	NA
PB.2282.1	chr11	+	1311	4	full-splice_match	SDHD	ENST00000375549.7	1439	4	106	22	6	-22	multi-exon	FALSE	canonical	1	69408	junction_2	210118.55359349452	NA	0	NA	TRUE	NA	NA	NA	A	coding	159	480	30	509	25.0	-2	True	AATAAA	-13
PB.7506.1	chr21	+	2489	2	full-splice_match	SLC5A3	ENST00000381151.4	11576	2	-54	9141	-54	-9141	multi-exon	TRUE	canonical	1	79930	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	641	1923	567	2489	70.0	-1	True	NA	NA
PB.8886.2	chr4	+	3203	12	full-splice_match	PDLIM5	ENST00000627587.2	1853	12	-55	-1295	2	0	multi-exon	FALSE	canonical	1	10917	junction_2	220562.08876706182	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	365	1789	100.0	-3462	False	NA	NA
PB.10592.1	chr7	+	1491	12	novel_not_in_catalog	NCF1B	novel	930	6	NA	NA	-62	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	83895.42400566857	NA	2	1	TRUE	NA	NA	NA	A	coding	245	738	165	902	25.0	NA	False	AATAAA	-16
PB.12283.8	chrX	+	3087	18	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	3266	junction_17	47993.00718822335	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	370	2847	30.0	-36	True	AATAAA	-19
PB.12283.9	chrX	+	3542	17	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	122	2	intron_retention	FALSE	canonical	1	23413	junction_10	45720.74619616761	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	213	2666	35.0	2	True	AATAAA	-29
PB.12283.2	chrX	+	3899	18	novel_not_in_catalog	INTS6L	novel	3904	18	NA	NA	-41	8	intron_retention	FALSE	canonical	1	4767	junction_4	49940.3131664453	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2103	915	3017	35.0	0	True	AATAAA	-35
PB.12283.3	chrX	+	3913	17	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	128	0	intron_retention	FALSE	canonical	1	35744	junction_10	44338.21043253071	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	494	3040	35.0	8	True	AATAAA	-26
PB.12283.1	chrX	+	3349	18	novel_not_in_catalog	INTS6L	novel	3904	18	NA	NA	-67	2	intron_retention	FALSE	canonical	1	17	junction_1	50451.1111579583	NA	2	NA	TRUE	NA	NA	NA	C	coding	819	2460	14	2473	35.0	-1676	False	AATAAA	-29
PB.12283.6	chrX	+	3639	17	full-splice_match	INTS6L	ENST00000370752.4	3793	17	154	0	154	0	multi-exon	FALSE	canonical	1	23413	junction_10	44199.49308515172	NA	9	NA	TRUE	NA	NA	NA	C	coding	861	2586	181	2766	35.0	34	True	AATAAA	-26
PB.12283.7	chrX	+	3738	18	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	1	-17	intron_retention	FALSE	canonical	1	35744	junction_11	45886.97363377145	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	334	2898	50.0	0	True	ATTAAA	-32
PB.12283.4	chrX	+	7212	16	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	53872	junction_1	40307.0709708469	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	5135	6340	35.0	-38	True	AATAAA	-25
PB.12283.5	chrX	+	3771	18	full-splice_match	INTS6L	ENST00000639893.1	3904	18	158	-25	142	8	multi-exon	FALSE	canonical	1	35744	junction_11	44568.622955763516	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	193	2889	35.0	22	True	AATAAA	-35
PB.10233.1	chr6	-	2220	8	novel_in_catalog	IFNGR1	novel	2139	7	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	8056	junction_7	411497.7996565766	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	234	1673	20.0	-62	True	AATAAA	-16
PB.177.13	chr1	+	2337	15	incomplete-splice_match	SRRM1	ENST00000323848.13	4011	17	261	3069	1	690	3prime_fragment	FALSE	canonical	1	68130	junction_12	199166.18502124897	NA	2	NA	TRUE	NA	NA	NA	C	coding	761	2283	55	2337	35.0	-29	True	NA	NA
PB.10233.3	chr6	-	2405	7	full-splice_match	IFNGR1	ENST00000644894.1	2492	7	99	-12	-9	0	multi-exon	FALSE	canonical	1	12964	junction_6	352202.97480071377	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	546	1859	15.0	212	False	AATAAA	-15
PB.10233.2	chr6	-	2054	7	full-splice_match	IFNGR1	ENST00000367739.8	2139	7	85	0	-51	0	multi-exon	FALSE	canonical	1	576912	junction_6	181764.5576771867	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	38	1507	20.0	-7	True	AATAAA	-16
PB.10233.5	chr6	-	2493	8	full-splice_match	IFNGR1	ENST00000646898.1	2519	8	38	-12	0	0	multi-exon	FALSE	canonical	1	4638	junction_7	412236.4142801199	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	508	1947	15.0	-8	True	AATAAA	-15
PB.10233.4	chr6	-	1977	7	full-splice_match	IFNGR1	ENST00000645753.1	1948	7	-16	-13	-2	0	multi-exon	FALSE	canonical	1	969	junction_6	356289.43984257145	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	84	1430	20.0	219	False	AATAAA	-16
PB.10233.7	chr6	-	2227	8	full-splice_match	IFNGR1	ENST00000643119.1	2136	8	-94	3	43	-3	multi-exon	FALSE	canonical	1	382	junction_7	416883.31220442324	NA	2	NA	TRUE	NA	NA	NA	C	coding	470	1413	272	1684	15.0	-49	True	AATAAA	-12
PB.8779.22	chr4	+	3218	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	226310.96955574694	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	199	1806	15.0	-2	True	TATAAA	-35
PB.10233.8	chr6	-	2288	5	incomplete-splice_match	IFNGR1	ENST00000367739.8	2139	7	76	4506	-60	1509	3prime_fragment	FALSE	canonical	1	576912	junction_4	214185.09871954212	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	47	805	75.0	-16	True	NA	NA
PB.10834.1	chr7	+	2935	20	full-splice_match	STRIP2	ENST00000435494.2	2866	20	-65	-4	-52	4	multi-exon	FALSE	canonical	1	33137	junction_9	20638.008869418165	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	93	2369	25.0	-52	False	NA	NA
PB.10834.2	chr7	+	2620	21	full-splice_match	STRIP2	ENST00000249344.6	5115	21	-5	2500	-5	2268	multi-exon	FALSE	canonical	1	33137	junction_9	20281.780354791343	NA	1	1	TRUE	NA	NA	NA	C	coding	834	2505	46	2550	25.0	-5	True	AATAAA	-22
PB.8779.27	chr4	+	2023	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	235198.9002161256	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	199	1857	30.0	-2	True	AATAAA	-24
PB.9140.1	chr5	-	5989	1	intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	108	327	4756	5082	75.0	NA	False	NA	NA
PB.11044.9	chr8	+	2156	10	novel_not_in_catalog	PPP2R2A	novel	3940	10	NA	NA	67	0	any annotated donor/acceptor	FALSE	canonical	1	1645	junction_1	284174.78617469233	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	574	1440	15.0	-1777	False	AATAAA	-16
PB.8779.26	chr4	+	2080	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	212525.69536755985	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	199	1914	30.0	-2	True	AATAAA	-24
PB.12296.7	chrX	-	3725	30	novel_in_catalog	ATP11C	novel	6924	29	NA	NA	873	0	combination_of_known_junctions	FALSE	canonical	1	90679	junction_29	33777.319534201895	NA	0	NA	TRUE	NA	NA	NA	B	coding	1129	3390	156	3545	35.0	829	False	AATAAA	-17
PB.1937.12	chr11	-	2819	15	incomplete-splice_match	FNBP4	ENST00000263773.9	3972	17	-30	6488	-30	-23	3prime_fragment	FALSE	canonical	1	164521	junction_4	109082.5286812228	NA	1	NA	TRUE	NA	NA	NA	C	coding	925	2775	44	2818	70.0	-18	True	NA	NA
PB.1937.11	chr11	-	3822	17	full-splice_match	FNBP4	ENST00000263773.9	3972	17	-16	166	-16	-166	multi-exon	FALSE	canonical	1	164521	junction_6	114992.74928439783	NA	3	NA	TRUE	NA	NA	NA	C	coding	1017	3054	30	3083	35.0	-4	True	CATAAA	-13
PB.1937.10	chr11	-	4109	17	novel_not_in_catalog	FNBP4	novel	3972	17	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	147092.97886025824	NA	1	NA	TRUE	NA	NA	NA	C	coding	924	2775	432	3206	10.0	9	True	AATAAA	-18
PB.1937.17	chr11	-	2655	6	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-19	-2486	intron_retention	FALSE	canonical	1	225152	junction_5	101573.09671364755	NA	3	NA	TRUE	NA	NA	NA	C	coding	223	672	33	704	70.0	-7	True	AAGAAA	-42
PB.1937.16	chr11	-	2043	1	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-434	-774	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.1937.15	chr11	-	1593	9	novel_not_in_catalog	FNBP4	novel	3972	17	NA	NA	43	-4238	any annotated donor/acceptor	FALSE	canonical	1	59860	junction_8	132769.88997268685	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1482	111	1592	60.0	-1	True	NA	NA
PB.1937.14	chr11	-	5586	11	full-splice_match	FNBP4	ENST00000534003.5	2515	11	-101	-2970	54	1098	multi-exon	FALSE	canonical	1	225152	junction_10	73994.89330629514	NA	4	NA	TRUE	NA	NA	NA	C	coding	623	1872	100	1971	100.0	72	False	NA	NA
PB.5712.1	chr19	+	3637	20	novel_not_in_catalog	DNM2	novel	2774	21	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	322366.84118152066	NA	3	1	TRUE	NA	NA	NA	B	coding	556	1671	165	1835	0.0	0	True	AATAAA	-29
PB.10049.1	chr6	+	2601	7	incomplete-splice_match	PTP4A1	ENST00000648894.1	4711	8	6182	1920	6167	-5	5prime_fragment	FALSE	canonical	1	5706	junction_2	754971.2200652456	NA	1	NA	TRUE	NA	NA	NA	B	coding	173	522	797	1318	30.0	-5	True	AATAAA	-24
PB.7375.1	chr20	-	2238	7	full-splice_match	ZBP1	ENST00000395822.7	2073	7	104	-269	1	269	multi-exon	FALSE	canonical	1	20899	junction_3	18863.944032789703	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	178	1242	20.0	22	True	NA	NA
PB.6444.5	chr2	+	3747	6	full-splice_match	PPM1B	ENST00000378551.6	3877	6	1	129	1	-129	multi-exon	FALSE	canonical	1	187338	junction_5	217251.13376974585	NA	2	1	TRUE	NA	NA	NA	C	coding	387	1164	412	1575	95.0	3	True	NA	NA
PB.7375.2	chr20	-	1937	8	full-splice_match	ZBP1	ENST00000371173.7	2195	8	49	209	3	0	multi-exon	FALSE	canonical	1	11533	junction_7	19758.55945752966	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	130	1419	90.0	1	True	NA	NA
PB.10049.2	chr6	+	2529	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	537	2022	537	-2022	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	617	1138	35.0	0	True	AATAAA	-17
PB.10174.10	chr6	+	3163	5	novel_in_catalog	NT5DC1	novel	6923	12	NA	NA	7	0	intron_retention	FALSE	canonical	1	96955	junction_1	70710.11334137431	NA	3	NA	TRUE	NA	NA	NA	C	coding	147	444	2638	3081	25.0	5	True	TATAAA	-16
PB.4909.7	chr17	-	5011	6	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	1	-8	intron_retention	FALSE	canonical	1	1221	junction_5	55648.76480354258	NA	33	2	TRUE	NA	NA	NA	C	coding	901	2706	263	2968	50.0	1	True	AATAAA	-29
PB.4909.6	chr17	-	5115	6	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	9989	junction_5	52519.06838625377	NA	3	NA	TRUE	NA	NA	NA	C	coding	901	2706	366	3071	55.0	3989	False	AATAAA	-30
PB.4909.5	chr17	-	5111	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-7	intron_retention	FALSE	canonical	1	9687	junction_5	50740.453810435014	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	362	3067	55.0	0	True	AATAAA	-30
PB.4909.4	chr17	-	5133	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-7	intron_retention	FALSE	canonical	1	59128	junction_6	37390.06595972013	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	384	3089	55.0	-2	True	AATAAA	-30
PB.4909.3	chr17	-	5193	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-7	intron_retention	FALSE	canonical	1	5713	junction_5	51871.481275038466	NA	3	NA	TRUE	NA	NA	NA	C	coding	901	2706	444	3149	55.0	0	True	AATAAA	-30
PB.4909.2	chr17	-	5670	6	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	0	-7	intron_retention	FALSE	canonical	1	59128	junction_5	36280.49732073693	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	921	3626	55.0	0	True	AATAAA	-30
PB.4909.1	chr17	-	4916	5	full-splice_match	SLFN11	ENST00000308377.8	4910	5	-13	7	0	-7	multi-exon	FALSE	canonical	1	11939	junction_4	56394.621168600825	NA	2	NA	TRUE	NA	NA	NA	C	coding	901	2706	167	2872	55.0	0	True	AATAAA	-30
PB.3938.1	chr15	-	1752	8	full-splice_match	TIPIN	ENST00000261881.8	1744	8	-1	-7	-1	7	multi-exon	FALSE	canonical	1	108915	junction_4	48665.36858244584	NA	0	NA	TRUE	NA	NA	NA	A	coding	301	906	88	993	40.0	-33	True	AGTAAA	-10
PB.4703.22	chr17	+	4178	17	novel_in_catalog	RABEP1	novel	551	3	NA	NA	-15	-1073	combination_of_known_junctions	FALSE	canonical	1	7784	junction_1	121337.4574452479	NA	13	NA	TRUE	NA	NA	NA	C	coding	819	2460	203	2662	35.0	1	True	AATAAA	-23
PB.2516.4	chr12	+	2301	7	full-splice_match	FGFR1OP2	ENST00000229395.7	2924	7	80	543	-18	-543	multi-exon	FALSE	canonical	1	120425	junction_5	131012.53764864984	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	263	1024	45.0	-7	True	ATTAAA	-15
PB.4703.20	chr17	+	5251	17	novel_in_catalog	RABEP1	novel	551	3	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	7784	junction_1	121337.4574452479	NA	5	NA	TRUE	NA	NA	NA	C	coding	819	2460	204	2663	5.0	0	True	ATTAAA	-19
PB.4703.21	chr17	+	1902	5	incomplete-splice_match	RABEP1	ENST00000341923.10	2490	17	-203	44034	-16	2500	3prime_fragment	FALSE	canonical	1	259749	junction_1	103686.41365434528	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	204	881	70.0	0	True	NA	NA
PB.2516.1	chr12	+	2783	6	full-splice_match	FGFR1OP2	ENST00000327214.5	2790	6	4	3	4	-3	multi-exon	FALSE	canonical	1	246722	junction_5	110471.88374351186	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	222	869	25.0	0	True	ATTAAA	-19
PB.4909.9	chr17	-	4762	6	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	-1	-259	intron_retention	FALSE	canonical	1	1221	junction_5	55648.76480354258	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	265	2970	20.0	-1	True	AATAAA	-29
PB.4909.8	chr17	-	5081	7	novel_in_catalog	SLFN11	novel	4910	5	NA	NA	-1	-11	intron_retention	FALSE	canonical	1	1874	junction_5	52980.47552767801	NA	2	NA	TRUE	NA	NA	NA	C	coding	901	2706	336	3041	40.0	-1	True	AATAAA	-26
PB.10578.5	chr7	+	4074	7	full-splice_match	TMEM248	ENST00000341567.8	4229	7	154	1	117	-1	multi-exon	FALSE	canonical	1	216373	junction_1	274227.4379689239	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	102	1046	5.0	-9236	False	AATAAA	-13
PB.10578.4	chr7	+	3928	6	novel_in_catalog	TMEM248	novel	4229	7	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	216373	junction_1	299435.8531583017	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	265	1125	30.0	-9399	False	AATAAA	-19
PB.10578.7	chr7	+	4277	8	novel_not_in_catalog	TMEM248	novel	4229	7	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	401751.4300914059	NA	22	NA	TRUE	NA	NA	NA	C	coding	314	945	305	1249	5.0	6	True	AATAAA	-13
PB.10578.6	chr7	+	3900	5	novel_in_catalog	TMEM248	novel	4229	7	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	7248	junction_4	348880.50946348376	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	256	930	5.0	0	True	AATAAA	-13
PB.10578.1	chr7	+	1816	7	full-splice_match	TMEM248	ENST00000341567.8	4229	7	17	2396	10	2	multi-exon	FALSE	canonical	1	216373	junction_1	274227.4379689239	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	239	1183	25.0	17	True	AATAAA	-23
PB.10578.3	chr7	+	4053	6	full-splice_match	TMEM248	ENST00000433271.6	1610	6	-46	-2397	-9	-1	multi-exon	FALSE	canonical	1	3409	junction_4	379109.3439679903	NA	3	NA	TRUE	NA	NA	NA	C	coding	203	612	265	876	5.0	-9399	False	AATAAA	-13
PB.10578.2	chr7	+	4437	8	novel_in_catalog	TMEM248	novel	4229	7	NA	NA	-111	-1	combination_of_known_junctions	FALSE	canonical	1	5833	junction_1	398965.7481186032	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	465	1409	5.0	-9501	False	AATAAA	-13
PB.11275.25	chr8	-	2754	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	12	-38	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	808730.995599639	NA	6	NA	TRUE	NA	NA	NA	C	coding	245	738	91	828	30.0	12	True	NA	NA
PB.11956.2	chrX	-	2069	4	novel_not_in_catalog	PUDP	novel	2140	4	NA	NA	22370	0	any annotated donor/acceptor	FALSE	canonical	1	25	junction_3	99548.20573080271	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	211	693	30.0	NA	False	NA	NA
PB.10578.8	chr7	+	4079	6	novel_in_catalog	TMEM248	novel	4229	7	NA	NA	-1	0	no_combination_of_known_junctions	TRUE	canonical	1	5953	junction_5	385200.52959589765	NA	2	NA	TRUE	NA	NA	NA	C	coding	266	801	250	1050	0.0	6	True	AATAAA	-14
PB.11956.1	chrX	-	2086	4	full-splice_match	PUDP	ENST00000381077.9	2140	4	54	0	-11	0	multi-exon	FALSE	canonical	1	114088	junction_3	46434.87253012426	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	24	710	30.0	-1	True	NA	NA
PB.1643.9	chr10	-	2556	21	novel_not_in_catalog	XPNPEP1	novel	4384	17	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	167486.9039192244	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	77	1399	5.0	43	False	AATAAA	-16
PB.1643.8	chr10	-	2573	21	novel_not_in_catalog	XPNPEP1	novel	4384	17	NA	NA	37	0	any annotated donor/acceptor	FALSE	canonical	1	953	junction_20	164610.3928124224	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	167	2155	5.0	-2	True	AATAAA	-16
PB.1240.32	chr1	-	2187	14	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	235	57	any annotated donor/acceptor	FALSE	canonical	1	137	junction_13	1813062.2294892247	NA	5	NA	TRUE	NA	NA	NA	C	coding	513	1542	329	1870	20.0	1151	False	AGTAAA	-14
PB.5809.1	chr19	-	2267	6	novel_not_in_catalog	AC008764.4	novel	468	7	NA	NA	-36	-56053	intron_retention	FALSE	canonical	1	291	junction_1	494740.67294476606	NA	1	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-8	True	NA	NA
PB.5809.3	chr19	-	1340	5	full-splice_match	SMIM7	ENST00000487416.6	2776	5	25	1411	-2	-8	multi-exon	FALSE	canonical	1	1119683	junction_2	124396.28285242288	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	11	True	AATAAA	-11
PB.5809.2	chr19	-	1836	5	full-splice_match	SMIM7	ENST00000487416.6	2776	5	5	935	5	0	multi-exon	FALSE	canonical	1	1119683	junction_2	124396.28285242288	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-9	True	NA	NA
PB.3942.5	chr15	+	2651	19	full-splice_match	ZWILCH	ENST00000307897.9	3960	19	332	977	-4	-323	multi-exon	FALSE	canonical	1	193986	junction_5	47769.06857899075	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	49	1824	10.0	-35	True	AATAAA	-31
PB.3942.4	chr15	+	1968	18	incomplete-splice_match	ZWILCH	ENST00000446801.6	3256	19	151	2782	-27	0	3prime_fragment	FALSE	canonical	1	30171	junction_1	75030.31848014396	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	509	1942	25.0	-58	False	NA	NA
PB.3942.7	chr15	+	3593	19	full-splice_match	ZWILCH	ENST00000307897.9	3960	19	367	0	0	0	multi-exon	FALSE	canonical	1	193986	junction_5	47769.06857899075	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	14	1789	30.0	0	True	AATAAA	-17
PB.3942.6	chr15	+	3068	19	full-splice_match	ZWILCH	ENST00000446801.6	3256	19	175	13	-3	0	multi-exon	FALSE	canonical	1	30171	junction_1	73312.05662345799	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	485	1918	60.0	-34	True	AATAAA	-11
PB.3942.1	chr15	+	1839	18	incomplete-splice_match	ZWILCH	ENST00000307897.9	3960	19	343	3423	2	0	3prime_fragment	FALSE	canonical	1	193986	junction_5	48848.22118410465	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	38	1813	25.0	-24	True	NA	NA
PB.1643.4	chr10	-	9145	17	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	-7	0	intron_retention	FALSE	canonical	1	338057	junction_15	122791.43773583879	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	45	1367	5.0	-22	True	AATAAA	-16
PB.3942.3	chr15	+	2944	19	full-splice_match	ZWILCH	ENST00000307897.9	3960	19	362	654	-5	0	multi-exon	FALSE	canonical	1	193986	junction_5	47769.06857899075	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	19	1794	60.0	-5	True	AATAAA	-11
PB.1643.6	chr10	-	2581	21	full-splice_match	XPNPEP1	ENST00000502935.5	2539	21	-42	0	-42	0	multi-exon	FALSE	canonical	1	338057	junction_19	119183.63491440425	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	163	2163	5.0	-43	False	AATAAA	-16
PB.1087.7	chr1	+	2247	11	full-splice_match	CD55	ENST00000314754.12	2220	11	-27	0	-27	0	multi-exon	FALSE	canonical	1	41489	junction_10	605341.0977076065	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	93	1415	35.0	-4	True	AATAAA	-18
PB.3656.22	chr14	+	1395	10	incomplete-splice_match	PAPOLA	ENST00000392990.6	2588	21	-149	30563	-3	-20	3prime_fragment	FALSE	canonical	1	677549	junction_9	274568.51266062295	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	185	1138	70.0	19	True	NA	NA
PB.235.2	chr1	-	2193	10	full-splice_match	MECR	ENST00000263702.10	1353	10	14	-854	-3	-90	multi-exon	FALSE	canonical	1	137448	junction_9	56815.08383049933	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	13	1134	85.0	5	True	NA	NA
PB.235.3	chr1	-	2403	12	novel_in_catalog	MECR	novel	2416	10	NA	NA	1	-90	combination_of_known_junctions	FALSE	canonical	1	6567	junction_10	125165.74222701542	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	451	1344	85.0	0	True	NA	NA
PB.2181.1	chr11	+	2712	13	full-splice_match	CAPN5	ENST00000648180.1	4367	13	-5	1660	5	0	multi-exon	FALSE	canonical	1	35041	junction_1	48573.776028211854	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	165	2087	0.0	-5	True	AATAAA	-43
PB.235.5	chr1	-	2173	11	novel_not_in_catalog	MECR	novel	2416	10	NA	NA	0	-90	any annotated donor/acceptor	FALSE	canonical	1	4538	junction_1	129967.53011213994	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	392	997	85.0	-19	True	NA	NA
PB.235.6	chr1	-	1337	10	full-splice_match	MECR	ENST00000263702.10	1353	10	11	5	3	-5	multi-exon	FALSE	canonical	1	137448	junction_9	56815.08383049933	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	16	1137	45.0	2	True	AATAAA	-19
PB.2181.2	chr11	+	4361	13	full-splice_match	CAPN5	ENST00000648180.1	4367	13	0	6	0	-6	multi-exon	FALSE	canonical	1	35041	junction_1	48573.776028211854	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	160	2082	30.0	0	True	AATAAA	-14
PB.4517.9	chr16	-	1980	1	novel_in_catalog	COG8	novel	2262	4	NA	NA	-1941	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	266	801	38	838	15.0	-20	True	TTTAAA	-18
PB.1087.9	chr1	+	1556	10	full-splice_match	CD55	ENST00000367063.6	1691	10	143	-8	-26	8	multi-exon	FALSE	canonical	1	114792	junction_9	536134.1041883798	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	92	1426	20.0	-3	True	NA	NA
PB.1087.8	chr1	+	2103	9	novel_in_catalog	CD55	novel	2892	10	NA	NA	-27	89	intron_retention	FALSE	canonical	1	201639	junction_8	484712.18956586433	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	93	1199	70.0	-4	True	NA	NA
PB.8950.1	chr4	+	3780	6	full-splice_match	UGT8	ENST00000310836.10	4084	6	297	7	-18	-7	multi-exon	FALSE	canonical	1	46652	junction_1	24782.176366090207	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	226	1851	40.0	-55	True	AATAAA	-9
PB.10676.3	chr7	+	2638	21	novel_in_catalog	VPS50	novel	1193	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	4268	junction_20	39354.485264420626	NA	1	NA	TRUE	NA	NA	NA	C	coding	675	2028	124	2151	20.0	0	True	NA	NA
PB.8038.11	chr3	+	3559	15	full-splice_match	CTNNB1	ENST00000349496.10	3947	15	378	10	4	0	multi-exon	FALSE	canonical	1	1458507	junction_1	467647.9068772123	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	113	2458	10.0	-4501	False	ATTAAA	-15
PB.7361.2	chr20	-	3451	6	full-splice_match	ZFP64	ENST00000216923.4	3264	6	-196	9	-196	-9	multi-exon	FALSE	canonical	1	76995	junction_1	38014.94624276088	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	547	2592	50.0	-29	True	AATAAA	-13
PB.7361.3	chr20	-	2866	5	full-splice_match	ZFP64	ENST00000346617.8	2876	5	2	8	2	-8	multi-exon	FALSE	canonical	1	12183	junction_3	47705.14153304128	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	123	2006	50.0	19	True	AATAAA	-14
PB.9612.10	chr5	+	5978	51	novel_in_catalog	DOCK2	novel	6097	52	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	4376	junction_45	96490.03011637833	NA	1	NA	TRUE	NA	NA	NA	C	coding	1802	5409	51	5459	25.0	2	True	AATAAA	-19
PB.7361.1	chr20	-	3168	7	novel_not_in_catalog	ZFP64	novel	1841	9	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	156	junction_4	62000.857234441166	NA	3	NA	TRUE	NA	NA	NA	C	coding	523	1572	730	2301	30.0	5	True	AATAAA	-21
PB.8950.3	chr4	+	3860	7	novel_in_catalog	UGT8	novel	4084	6	NA	NA	5	-7	combination_of_known_junctions	FALSE	canonical	1	5676	junction_1	47231.45339236932	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	306	1931	40.0	-32	True	AATAAA	-9
PB.7361.4	chr20	-	2772	6	full-splice_match	ZFP64	ENST00000216923.4	3264	6	207	285	0	-285	multi-exon	FALSE	canonical	1	76995	junction_1	38014.94624276088	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	144	2189	20.0	-2	True	ATTAAA	-15
PB.8950.2	chr4	+	4232	6	novel_not_in_catalog	UGT8	novel	4084	6	NA	NA	-72	-7	any annotated donor/acceptor	FALSE	canonical	1	2680	junction_1	41949.41602454079	NA	3	NA	TRUE	NA	NA	NA	C	coding	541	1626	678	2303	40.0	-563	False	AATAAA	-9
PB.10676.6	chr7	+	3475	28	full-splice_match	VPS50	ENST00000305866.9	3613	28	27	111	1	-106	multi-exon	FALSE	canonical	1	85507	junction_14	27275.541653134573	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	123	2996	20.0	1	True	ATTAAA	-32
PB.2010.8	chr11	+	2738	8	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	2084424	junction_1	756074.0377866848	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	1542	2561	25.0	-2	True	AATAAA	-31
PB.2010.9	chr11	+	2445	9	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	-2	6	intron_retention	FALSE	canonical	1	19244	junction_2	1314789.4094994774	NA	3	NA	TRUE	NA	NA	NA	C	coding	175	528	1745	2272	15.0	-2	True	AATAAA	-27
PB.2010.6	chr11	+	3387	8	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	-12	-6	intron_retention	FALSE	canonical	1	2084424	junction_1	771105.6753276626	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	165	929	20.0	-7559	False	AATAAA	-30
PB.2010.7	chr11	+	1878	9	full-splice_match	SLC3A2	ENST00000338663.11	1904	9	43	-17	19	-3	multi-exon	FALSE	canonical	1	2084424	junction_1	721341.1207045938	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	110	1699	25.0	-7504	False	AATAAA	-33
PB.2010.4	chr11	+	2194	12	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	-10	0	intron_retention	FALSE	canonical	1	40009	junction_2	1541512.5649032604	NA	12	3	TRUE	NA	NA	NA	C	coding	630	1893	137	2029	10.0	25	True	AATAAA	-19
PB.2010.5	chr11	+	2313	13	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	65657	junction_3	1586729.1143896636	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	160	2148	10.0	2	True	AATAAA	-19
PB.2010.2	chr11	+	2078	10	full-splice_match	SLC3A2	ENST00000377889.6	1993	10	-67	-18	-25	-4	multi-exon	FALSE	canonical	1	58194	junction_1	1229383.7548700247	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	194	1900	25.0	-32	True	AATAAA	-32
PB.2010.3	chr11	+	2142	11	full-splice_match	SLC3A2	ENST00000535296.5	2084	11	-75	17	-9	0	multi-exon	FALSE	canonical	1	242976	junction_1	1364840.9960933363	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	178	1977	10.0	-16	True	AATAAA	-19
PB.6014.23	chr19	+	3050	15	full-splice_match	HNRNPUL1	ENST00000263367.7	2952	15	-98	0	-55	0	multi-exon	FALSE	canonical	1	76564	junction_1	562059.7757330821	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	326	2596	75.0	-57	False	NA	NA
PB.6014.22	chr19	+	2864	15	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	1	75250	junction_1	669019.1088815728	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	110	2410	75.0	1	True	NA	NA
PB.8806.5	chr4	+	2958	2	full-splice_match	UBA6-AS1	ENST00000506606.1	2233	2	9	-734	9	731	multi-exon	FALSE	canonical	1	92538	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	NA	NA
PB.8806.4	chr4	+	1831	3	novel_in_catalog	UBA6-AS1	novel	1445	3	NA	NA	0	20	no_combination_of_known_junctions	FALSE	canonical	1	28582	junction_2	31978.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-28	True	NA	NA
PB.8806.1	chr4	+	3042	3	novel_in_catalog	UBA6-AS1	novel	1445	3	NA	NA	-25	10233	intron_retention	FALSE	canonical	1	30515	junction_1	790.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	2117	2458	95.0	-29	True	NA	NA
PB.8038.16	chr3	+	3150	16	novel_in_catalog	CTNNB1	novel	3278	16	NA	NA	0	1	intron_retention	FALSE	canonical	1	19514	junction_1	816220.9773498405	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	167	2512	10.0	0	True	ATTAAA	-16
PB.8806.3	chr4	+	2229	2	full-splice_match	UBA6-AS1	ENST00000506606.1	2233	2	0	4	0	-4	multi-exon	FALSE	canonical	1	92538	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-28	True	NA	NA
PB.8806.2	chr4	+	2565	3	novel_in_catalog	UBA6-AS1	novel	1445	3	NA	NA	-21	733	no_combination_of_known_junctions	FALSE	canonical	1	28582	junction_2	31978.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-49	False	NA	NA
PB.3211.9	chr13	-	2169	14	novel_not_in_catalog	RBM26	novel	5152	21	NA	NA	-25	21079	any annotated donor/acceptor	FALSE	canonical	1	111884	junction_7	74059.3976591299	NA	1	1	TRUE	NA	NA	NA	C	coding	706	2118	52	2169	65.0	419	False	AATGAA	-7
PB.11226.52	chr8	-	1545	11	incomplete-splice_match	NBN	ENST00000396252.6	4907	19	18561	21955	-2	-11932	internal_fragment	FALSE	canonical	1	46834	junction_9	195344.2086636049	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1143	403	1545	40.0	-1	True	NA	NA
PB.11226.53	chr8	-	1497	10	incomplete-splice_match	NBN	ENST00000265433.7	4666	16	47	21955	-4	-11932	3prime_fragment	FALSE	canonical	1	198817	junction_8	146194.2901865042	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1389	109	1497	40.0	-3	True	NA	NA
PB.8194.2	chr3	-	3718	21	novel_not_in_catalog	DENND6A	novel	4655	20	NA	NA	-2	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	55358.91185570305	NA	2	NA	TRUE	NA	NA	NA	B	coding	608	1827	74	1900	20.0	-15	True	ATTAAA	-19
PB.7655.1	chr22	+	546	3	full-splice_match	MIF	ENST00000215754.7	939	3	392	1	-54	-1	multi-exon	FALSE	canonical	1	12945858	junction_2	822180.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	115	348	80	427	5.0	13	True	AATAAA	-17
PB.876.1	chr1	+	1405	3	full-splice_match	PCP4L1	ENST00000504449.1	1424	3	18	1	18	-1	multi-exon	FALSE	canonical	1	88495	junction_1	15272.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	68	207	231	437	15.0	0	True	AATAAA	-31
PB.683.9	chr1	-	3414	6	full-splice_match	LIX1L	ENST00000604000.3	3975	6	-13	574	-13	-574	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	88	1101	70.0	0	True	AATAGA	-29
PB.598.1	chr1	+	3959	16	novel_in_catalog	AMPD2	novel	572	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	135165	junction_1	122175.48849796163	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	433	1848	20.0	0	True	AATAAA	-13
PB.598.2	chr1	+	3985	17	novel_in_catalog	AMPD2	novel	572	5	NA	NA	0	-3	intron_retention	FALSE	canonical	1	135165	junction_1	115898.12355415855	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	1394	3091	25.0	0	True	AATAAA	-10
PB.598.3	chr1	+	4074	19	full-splice_match	AMPD2	ENST00000528667.5	3134	19	-39	-901	0	2	multi-exon	FALSE	canonical	1	10502	junction_1	162028.48269268725	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	534	3173	10.0	9	True	AATAAA	-17
PB.3656.9	chr14	+	4358	21	novel_in_catalog	PAPOLA	novel	547	5	NA	NA	2	-28	combination_of_known_junctions	FALSE	canonical	1	11260	junction_15	344471.3164820077	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	210	1646	85.0	-6	True	NA	NA
PB.3656.8	chr14	+	4449	21	full-splice_match	PAPOLA	ENST00000392990.6	2588	21	-174	-1687	2	4	multi-exon	FALSE	canonical	1	74126	junction_19	335227.84600180516	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	210	2384	15.0	-6	True	AATAAA	-20
PB.598.6	chr1	+	3713	18	full-splice_match	AMPD2	ENST00000342115.8	3728	18	19	-4	9	4	multi-exon	FALSE	canonical	1	135165	junction_1	117029.39501385094	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	414	2810	5.0	19	True	AATAAA	-19
PB.598.7	chr1	+	3587	17	novel_in_catalog	AMPD2	novel	572	5	NA	NA	12	2	combination_of_known_junctions	TRUE	canonical	1	28687	junction_14	154680.18691864677	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	411	2375	10.0	22	True	AATAAA	-17
PB.3656.5	chr14	+	2815	22	full-splice_match	PAPOLA	ENST00000216277.12	4519	22	9	1695	0	9	multi-exon	FALSE	canonical	1	516762	junction_12	274573.26895494247	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	212	2449	20.0	-8	True	AATACA	-33
PB.3656.4	chr14	+	4394	21	novel_in_catalog	PAPOLA	novel	547	5	NA	NA	-2	-28	no_combination_of_known_junctions	FALSE	canonical	1	2583	junction_7	345136.54437352763	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	214	2361	85.0	-10	True	NA	NA
PB.3656.7	chr14	+	3992	9	full-splice_match	PAPOLA	ENST00000557320.5	3264	9	-18	-710	1	706	multi-exon	FALSE	canonical	1	841227	junction_8	248525.80462147185	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	211	1068	45.0	-7	True	AATAAA	-16
PB.3656.6	chr14	+	1830	9	full-splice_match	PAPOLA	ENST00000557320.5	3264	9	-19	1453	0	736	multi-exon	FALSE	canonical	1	841227	junction_8	248525.80462147185	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	212	1069	75.0	-8	True	TATAAA	-44
PB.3656.1	chr14	+	2163	10	incomplete-splice_match	PAPOLA	ENST00000392990.6	2588	21	-187	29833	-2	706	3prime_fragment	TRUE	canonical	1	677549	junction_9	274568.51266062295	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	223	1176	45.0	-19	True	AATAAA	-16
PB.3656.3	chr14	+	4320	20	novel_in_catalog	PAPOLA	novel	547	5	NA	NA	5	-28	combination_of_known_junctions	FALSE	canonical	1	132303	junction_19	336799.04119207384	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	188	2287	85.0	16	True	NA	NA
PB.3656.2	chr14	+	3269	9	full-splice_match	PAPOLA	ENST00000557320.5	3264	9	-25	20	3	-20	multi-exon	FALSE	canonical	1	841227	junction_8	248525.80462147185	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	218	1075	70.0	-14	True	NA	NA
PB.7649.4	chr22	-	3543	6	incomplete-splice_match	GUSBP11	ENST00000422506.5	2055	10	19	64355	-16	-64355	3prime_fragment	FALSE	canonical	0	0	junction_2	66148.98937277879	NA	2	NA	TRUE	NA	NA	NA	B	coding	146	441	92	532	25.0	-13	True	NA	NA
PB.7649.1	chr22	-	3217	11	novel_not_in_catalog	AP000346.1	novel	1087	6	NA	NA	-78392	-7872	intron_retention	FALSE	non_canonical	0	0	junction_4	59187.64228967057	NA	1	NA	TRUE	NA	NA	NA	A	coding	142	429	905	1333	15.0	-9	True	AATAAA	-17
PB.7649.3	chr22	-	3001	11	novel_in_catalog	GUSBP11	novel	3816	5	NA	NA	-9	-40125	intron_retention	FALSE	canonical	0	0	junction_7	59139.951531008206	NA	2	NA	TRUE	NA	NA	NA	B	coding	142	429	902	1330	10.0	-6	True	ATTAAA	-22
PB.7649.2	chr22	-	3093	12	novel_in_catalog	GUSBP11	novel	3816	5	NA	NA	-4	-14685	intron_retention	FALSE	canonical	0	0	junction_8	58903.08963090235	NA	1	NA	TRUE	NA	NA	NA	B	coding	142	429	897	1325	15.0	-1	True	NA	NA
PB.4711.2	chr17	+	2440	4	incomplete-splice_match	PIMREG	ENST00000250056.12	1473	5	-15	2	11	-2	intron_retention	FALSE	canonical	1	96900	junction_2	45986.17876662026	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	99	788	15.0	-1	True	AATAAA	-15
PB.4711.3	chr17	+	2123	5	novel_in_catalog	PIMREG	novel	1948	6	NA	NA	7	-3	intron_retention	FALSE	canonical	1	96900	junction_2	41033.42245277013	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	72	761	15.0	-2	True	AATAAA	-14
PB.5617.8	chr19	-	3237	14	novel_in_catalog	EEF2	novel	352	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	18159193	junction_10	3305234.923804066	NA	2	1	TRUE	NA	NA	NA	C	coding	789	2370	84	2453	15.0	-1	True	AATAAA	-16
PB.4711.1	chr17	+	1539	6	full-splice_match	PIMREG	ENST00000572447.5	1948	6	3	406	3	-2	multi-exon	TRUE	canonical	1	96900	junction_2	40762.26992894287	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	107	823	15.0	-9	True	AATAAA	-15
PB.5617.6	chr19	-	3156	15	full-splice_match	EEF2	ENST00000309311.6	3164	15	6	2	0	-2	multi-exon	FALSE	canonical	1	18159193	junction_11	3205218.6139232246	NA	12	2	TRUE	NA	NA	NA	C	coding	858	2577	84	2660	10.0	-1	True	AATAAA	-15
PB.5617.7	chr19	-	3605	14	novel_in_catalog	EEF2	novel	352	2	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	18159193	junction_10	3267438.6183572845	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	85	1434	15.0	-2	True	AATAAA	-16
PB.9416.12	chr5	+	2011	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	3	-28	combination_of_known_junctions	FALSE	canonical	1	65772	junction_1	72978.03231291223	NA	2	1	TRUE	NA	NA	NA	C	coding	416	1251	625	1875	15.0	17	True	NA	NA
PB.1684.10	chr10	+	3124	18	incomplete-splice_match	SEC23IP	ENST00000369075.7	7168	19	19	10823	-15	65	3prime_fragment	FALSE	canonical	1	223811	junction_2	63129.50980896116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1000	3003	54	3056	25.0	0	True	TATAAA	-21
PB.1684.11	chr10	+	3341	18	novel_in_catalog	SEC23IP	novel	7168	19	NA	NA	-1	-1535	intron_retention	FALSE	canonical	1	3600	junction_14	97705.96017796242	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	40	2514	25.0	14	True	ATTAAA	-17
PB.1240.37	chr1	-	3093	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	-6	55	any annotated donor/acceptor	FALSE	canonical	1	5008	junction_11	1992078.7441861352	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	1276	2778	20.0	-3	True	AGTAAA	-12
PB.11093.2	chr8	-	2133	7	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	1	12388	junction_6	144468.30578442532	NA	3	NA	TRUE	NA	NA	NA	C	coding	223	672	152	823	35.0	30	True	AGTAAA	-15
PB.7456.15	chr21	+	2052	3	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	25	3284	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	13	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	5	True	AATAAA	-19
PB.9669.11	chr5	+	3902	8	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-3	intron_retention	FALSE	canonical	1	33236	junction_5	1867982.8997181503	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	33	956	35.0	0	True	AATAAA	-19
PB.9669.10	chr5	+	4170	6	novel_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-3	intron_retention	FALSE	canonical	1	3195594	junction_1	867321.2558196875	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	2101	2862	35.0	0	True	ATTAAA	-20
PB.9669.13	chr5	+	5732	7	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-3	intron_retention	FALSE	canonical	1	33236	junction_5	1938025.0316248068	NA	5	NA	TRUE	NA	NA	NA	C	coding	307	924	33	956	35.0	0	True	ATTAAA	-20
PB.7456.14	chr21	+	2199	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	13	3281	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	17	1	TRUE	NA	NA	NA	C	coding	133	402	334	735	25.0	-7	True	AATAAA	-16
PB.9669.15	chr5	+	5490	7	incomplete-splice_match	SQSTM1	ENST00000389805.8	2986	8	146	3	0	-3	intron_retention	FALSE	canonical	1	2631348	junction_1	1191112.2915063815	NA	13	NA	TRUE	NA	NA	NA	C	coding	390	1173	33	1205	35.0	0	True	AATAAA	-19
PB.9669.14	chr5	+	2691	9	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-3	intron_retention	FALSE	canonical	1	992	junction_8	1855854.8255886019	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	33	1355	35.0	0	True	AATAAA	-19
PB.2918.9	chr12	+	6096	16	full-splice_match	PTPN11	ENST00000351677.6	6101	16	9	-4	9	4	multi-exon	FALSE	canonical	1	126942	junction_7	97282.74863884598	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	190	1971	15.0	18	True	AATAAA	-22
PB.2918.8	chr12	+	2431	16	full-splice_match	PTPN11	ENST00000351677.6	6101	16	4	3666	4	1483	multi-exon	FALSE	canonical	1	126942	junction_7	97282.74863884598	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	195	1976	50.0	13	True	AAGAAA	-33
PB.2918.7	chr12	+	6119	16	novel_in_catalog	PTPN11	novel	573	2	NA	NA	-2	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_10	111547.28989247367	NA	4	1	TRUE	NA	NA	NA	C	coding	597	1794	201	1994	15.0	7	True	AATAAA	-22
PB.2918.6	chr12	+	2597	16	novel_not_in_catalog	PTPN11	novel	573	2	NA	NA	-2	1628	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	111547.28989247367	NA	2	1	TRUE	NA	NA	NA	C	coding	447	1344	206	1549	50.0	2	True	ATTAAA	-10
PB.2918.5	chr12	+	5734	13	novel_in_catalog	PTPN11	novel	573	2	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	3114	junction_10	123277.50570044083	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	207	1613	5.0	1	True	AATAAA	-18
PB.2918.4	chr12	+	4128	16	full-splice_match	PTPN11	ENST00000351677.6	6101	16	-8	1981	-3	-1981	multi-exon	FALSE	canonical	1	126942	junction_7	97282.74863884598	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	207	1988	50.0	1	True	NA	NA
PB.2918.3	chr12	+	5683	16	full-splice_match	PTPN11	ENST00000351677.6	6101	16	-15	433	-10	-433	multi-exon	FALSE	canonical	1	126942	junction_7	97282.74863884598	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	214	1995	45.0	-6	True	AATAAA	-33
PB.2918.2	chr12	+	6013	15	novel_in_catalog	PTPN11	novel	573	2	NA	NA	-10	-1	no_combination_of_known_junctions	FALSE	canonical	1	7669	junction_14	115299.19865714414	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	214	1950	10.0	-6	True	AATAAA	-17
PB.2918.1	chr12	+	5965	16	full-splice_match	PTPN11	ENST00000351677.6	6101	16	-17	153	-12	-153	multi-exon	FALSE	canonical	1	126942	junction_7	97282.74863884598	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	216	1997	40.0	-8	True	ATTAAA	-19
PB.7456.12	chr21	+	2160	4	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	11	3284	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	13	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9	True	AATAAA	-19
PB.7061.1	chr2	+	1464	2	antisense	novelGene_GPR55_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6825	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-3	True	AATAAA	-12
PB.3358.5	chr14	+	5978	7	incomplete-splice_match	KHNYN	ENST00000251343.9	6725	8	1558	495	620	-495	5prime_fragment	FALSE	canonical	1	245838	junction_4	57916.49415801647	NA	8	NA	TRUE	NA	NA	NA	C	coding	559	1680	245	1924	25.0	782	False	NA	NA
PB.507.2	chr1	-	3261	3	full-splice_match	C1orf52	ENST00000471115.5	1219	3	-30	-2012	0	-3	multi-exon	FALSE	canonical	1	196942	junction_2	112351.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	40	588	25.0	-19	True	NA	NA
PB.3358.2	chr14	+	3352	8	full-splice_match	KHNYN	ENST00000553935.5	3359	8	5	2	5	-2	multi-exon	FALSE	canonical	1	78781	junction_1	111672.07441689004	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	195	2231	15.0	-11	True	CATAAA	-20
PB.2829.1	chr12	-	1780	9	novel_in_catalog	DEPDC4	novel	2337	11	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	2177	junction_1	5144.311978717368	NA	0	NA	TRUE	NA	NA	NA	A	coding	517	1554	9	1562	30.0	NA	False	AATAAA	-16
PB.3358.3	chr14	+	6282	8	full-splice_match	KHNYN	ENST00000553935.5	3359	8	9	-2932	9	-494	multi-exon	FALSE	canonical	1	78781	junction_1	111672.07441689004	NA	2	NA	TRUE	NA	NA	NA	C	coding	678	2037	191	2227	25.0	-7	True	NA	NA
PB.10403.6	chr7	+	2301	5	full-splice_match	UMAD1	ENST00000463725.5	559	5	1	-1743	1	1	multi-exon	FALSE	canonical	1	11562	junction_3	70427.97775520393	NA	4	1	TRUE	NA	NA	NA	C	coding	102	309	345	653	50.0	1	True	AATAAA	-9
PB.10403.4	chr7	+	2226	4	novel_in_catalog	UMAD1	novel	570	4	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	157008	junction_3	37705.77114389196	NA	1	1	TRUE	NA	NA	NA	C	coding	137	414	133	546	35.0	1	True	AATAAA	-41
PB.10403.5	chr7	+	2420	5	novel_not_in_catalog	UMAD1	novel	570	4	NA	NA	1	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	100012.24198410663	NA	1	1	TRUE	NA	NA	NA	C	coding	165	498	243	740	35.0	1	True	AATAAA	-41
PB.10403.2	chr7	+	2237	4	novel_not_in_catalog	UMAD1	novel	570	4	NA	NA	-17	-5	any annotated donor/acceptor	FALSE	canonical	1	23	junction_1	98622.9034803219	NA	1	1	TRUE	NA	NA	NA	C	coding	137	414	144	557	35.0	-17	True	AATAAA	-41
PB.10403.3	chr7	+	2199	4	novel_not_in_catalog	UMAD1	novel	570	4	NA	NA	-3	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	98633.12580467071	NA	3	1	TRUE	NA	NA	NA	C	coding	137	414	106	519	35.0	-3	True	AATAAA	-41
PB.10403.1	chr7	+	2344	5	novel_not_in_catalog	UMAD1	novel	570	4	NA	NA	-17	-5	any annotated donor/acceptor	FALSE	canonical	1	23	junction_1	63591.87314969972	NA	6	1	TRUE	NA	NA	NA	C	coding	71	216	144	359	35.0	-17	True	AATAAA	-41
PB.11877.4	chr9	-	2953	4	novel_in_catalog	SURF6	novel	4447	5	NA	NA	211	792	intron_retention	FALSE	canonical	1	370809	junction_3	8266.060139039773	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	56	529	30.0	0	True	AATAAA	-12
PB.187.1	chr1	+	2055	8	novel_in_catalog	AL020996.2	novel	568	3	NA	NA	5964	9193	no_combination_of_known_junctions	TRUE	canonical	1	27955	junction_3	240583.1458392677	NA	3	NA	TRUE	NA	NA	NA	B	coding	195	588	557	1144	15.0	-41	True	ATTAAA	-20
PB.843.1	chr1	+	709	3	full-splice_match	DUSP23	ENST00000368108.7	694	3	-14	-1	14	1	multi-exon	FALSE	canonical	1	64907	junction_1	195951.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	150	453	51	503	20.0	-23	True	AATAAA	-20
PB.187.2	chr1	+	2471	6	novel_in_catalog	AL020996.2	novel	568	3	NA	NA	5981	9197	intron_retention	FALSE	canonical	1	328859	junction_1	119330.41938516767	NA	2	NA	TRUE	NA	NA	NA	B	coding	195	588	969	1556	10.0	-24	True	ATTAAA	-24
PB.9315.8	chr5	+	3287	16	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	6	-8	any annotated donor/acceptor	FALSE	canonical	1	2109	junction_1	121801.59403591107	NA	2	1	TRUE	NA	NA	NA	C	coding	480	1443	478	1920	15.0	0	True	AATAAA	-13
PB.9596.10	chr5	-	3098	11	full-splice_match	RNF145	ENST00000424310.6	3613	11	23	492	23	-77	multi-exon	FALSE	canonical	1	59589	junction_5	166865.99199585276	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	338	2329	10.0	24	True	AGTAAA	-19
PB.9596.11	chr5	-	2861	1	novel_in_catalog	RNF145	novel	3364	11	NA	NA	8527	-14287	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	9969	False	NA	NA
PB.791.3	chr1	+	2804	21	full-splice_match	ADAM15	ENST00000271836.10	2799	21	-5	0	-2	0	multi-exon	FALSE	canonical	1	307002	junction_1	210292.2932511496	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	87	2531	10.0	-15	True	AATAAA	-21
PB.791.2	chr1	+	3687	21	novel_in_catalog	ADAM15	novel	1181	9	NA	NA	-4	0	intron_retention	FALSE	canonical	1	6364	junction_1	289692.97877464595	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	89	2518	10.0	-17	True	AATAAA	-21
PB.7768.1	chr22	+	1996	1	novel_in_catalog	POLR2F	novel	582	6	NA	NA	-28	-174	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	274	825	373	1197	100.0	-1	True	NA	NA
PB.2068.2	chr11	-	1021	4	full-splice_match	CFL1	ENST00000308162.9	1234	4	127	86	-12	52	multi-exon	FALSE	canonical	1	9964939	junction_3	2154332.3950889185	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	108	608	5.0	9475	False	TATAAA	-19
PB.2068.1	chr11	-	1080	4	full-splice_match	CFL1	ENST00000308162.9	1234	4	154	0	15	0	multi-exon	FALSE	canonical	1	9964939	junction_3	2154332.3950889185	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	81	581	85.0	0	True	NA	NA
PB.791.4	chr1	+	3017	22	full-splice_match	ADAM15	ENST00000529473.5	3016	22	15	-16	-2	-1	multi-exon	FALSE	canonical	1	25832	junction_20	309628.5077764896	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	87	2480	10.0	-15	True	AATAAA	-20
PB.7938.13	chr3	-	1907	5	full-splice_match	VGLL4	ENST00000430365.6	1377	5	-23	-507	-23	100	multi-exon	FALSE	canonical	1	198403	junction_4	59299.88437172538	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	445	1320	0.0	97	False	AAAACA	-29
PB.7467.3	chr21	-	5332	4	full-splice_match	C21orf91	ENST00000400558.7	1090	4	30	-4272	6	-8	multi-exon	FALSE	canonical	1	9468	junction_1	78642.47251256085	NA	5	NA	TRUE	NA	NA	NA	C	coding	221	666	62	727	20.0	-1	True	AATAAA	-15
PB.7467.2	chr21	-	5397	5	full-splice_match	C21orf91	ENST00000284881.8	5433	5	27	9	3	-9	multi-exon	FALSE	canonical	1	123285	junction_4	28094.730400023418	NA	5	NA	TRUE	NA	NA	NA	C	coding	297	894	65	958	20.0	-4	True	AATAAA	-14
PB.7467.1	chr21	-	5971	5	novel_not_in_catalog	C21orf91-OT1	novel	717	5	NA	NA	-26831	-11564	any annotated donor/acceptor	FALSE	canonical	1	3173	junction_4	78544.00285349607	NA	15	NA	TRUE	NA	NA	NA	A	coding	297	894	631	1524	20.0	1	True	AATAAA	-22
PB.7467.7	chr21	-	1886	5	full-splice_match	C21orf91	ENST00000284881.8	5433	5	27	3520	3	317	multi-exon	FALSE	canonical	1	123285	junction_4	28094.730400023418	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	65	958	70.0	-4	True	NA	NA
PB.7467.6	chr21	-	2074	5	full-splice_match	C21orf91	ENST00000284881.8	5433	5	30	3329	6	508	multi-exon	FALSE	canonical	1	123285	junction_4	28094.730400023418	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	62	955	65.0	-1	True	AATATA	-37
PB.7467.5	chr21	-	4624	5	full-splice_match	C21orf91	ENST00000284881.8	5433	5	32	777	-7	-777	multi-exon	FALSE	canonical	1	123285	junction_4	28094.730400023418	NA	19	NA	TRUE	NA	NA	NA	C	coding	297	894	60	953	25.0	1	True	AATAAA	-22
PB.7467.8	chr21	-	3696	1	novel_in_catalog	C21orf91	novel	5433	5	NA	NA	-11	2043	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.5253.1	chr17	-	1378	8	full-splice_match	GALK1	ENST00000588479.5	1866	8	493	-5	18	5	multi-exon	FALSE	canonical	1	300899	junction_3	37538.64627613652	NA	0	NA	TRUE	NA	NA	NA	A	coding	392	1179	83	1261	15.0	2553	False	AATAAA	-19
PB.7690.2	chr22	+	6044	17	full-splice_match	NF2	ENST00000361166.8	1837	17	-419	-3788	-8	0	multi-exon	FALSE	canonical	1	145968	junction_15	64166.29317530642	NA	2	NA	TRUE	NA	NA	NA	C	coding	590	1773	420	2192	25.0	-61	True	AATAAA	-14
PB.8268.3	chr3	+	1807	8	full-splice_match	TFG	ENST00000476228.5	1783	8	-24	0	-24	0	multi-exon	FALSE	canonical	1	356923	junction_1	339595.69068039407	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	184	1374	25.0	64	True	AATAAA	-15
PB.8268.2	chr3	+	1777	8	full-splice_match	TFG	ENST00000490574.5	1696	8	-42	-39	5	0	multi-exon	FALSE	canonical	1	57243	junction_1	389651.58016104595	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	140	1342	30.0	2	True	AATAAA	-17
PB.8268.1	chr3	+	1778	8	full-splice_match	TFG	ENST00000418917.6	1716	8	-41	-21	-11	0	multi-exon	FALSE	canonical	1	57243	junction_1	399748.1877246	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	156	1346	25.0	-353	False	AATAAA	-14
PB.7075.1	chr2	+	1896	4	full-splice_match	EFHD1	ENST00000264059.7	2259	4	361	2	-127	-1	multi-exon	FALSE	canonical	1	180407	junction_1	83571.69267295129	NA	0	NA	TRUE	NA	NA	NA	A	coding	239	720	117	836	25.0	-15	True	AATAAA	-23
PB.1966.1	chr11	-	2319	16	full-splice_match	PRPF19	ENST00000227524.8	2157	16	18	-180	-1	180	multi-exon	FALSE	canonical	1	1096946	junction_15	249722.37678132803	NA	2	NA	TRUE	NA	NA	NA	C	coding	504	1515	189	1703	20.0	14	True	AATAAA	-17
PB.7690.1	chr22	+	1998	14	incomplete-splice_match	NF2	ENST00000403999.7	2999	16	-66	5600	9	-5600	3prime_fragment	TRUE	canonical	1	188911	junction_3	51240.87830996197	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1566	433	1998	45.0	-74	True	NA	NA
PB.8268.5	chr3	+	3326	8	full-splice_match	TFG	ENST00000240851.8	1978	8	63	-1411	16	1411	multi-exon	FALSE	canonical	1	356923	junction_1	315349.0119986594	NA	5	NA	TRUE	NA	NA	NA	C	coding	400	1203	278	1480	30.0	-30	True	AATAAA	-17
PB.1966.2	chr11	-	2000	16	full-splice_match	PRPF19	ENST00000227524.8	2157	16	139	18	92	-1	multi-exon	FALSE	canonical	1	1096946	junction_15	249722.37678132803	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	68	1582	75.0	7613	False	NA	NA
PB.3091.1	chr13	-	2649	1	novel_in_catalog	HMGB1	novel	4199	5	NA	NA	57	-151581	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	144	435	2	436	95.0	46	True	NA	NA
PB.3091.2	chr13	-	1755	1	genic	HMGB1	novel	NA	NA	NA	NA	-7	-152539	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-18	True	ATTAAA	-18
PB.9577.1	chr5	-	3111	10	full-splice_match	SPARC	ENST00000231061.8	3701	10	232	358	30	-358	multi-exon	FALSE	canonical	1	6462067	junction_9	1245753.4844703425	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	83	994	30.0	-1	True	AATAAA	-12
PB.9577.7	chr5	-	2141	10	novel_in_catalog	SPARC	novel	3701	10	NA	NA	32	51	combination_of_known_junctions	FALSE	canonical	1	16772	junction_3	2997699.4420739124	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	81	1007	10.0	1	True	AATAAA	-21
PB.6761.3	chr2	+	5425	11	full-splice_match	SPOPL	ENST00000280098.8	6025	11	280	320	149	-320	multi-exon	FALSE	canonical	1	76007	junction_4	30810.40019928336	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	100	1278	30.0	31	False	AATAAA	-18
PB.9577.5	chr5	-	2099	10	novel_not_in_catalog	SPARC	novel	3701	10	NA	NA	3	52	any annotated donor/acceptor	FALSE	canonical	1	4262	junction_7	3004256.727233251	NA	2	1	TRUE	NA	NA	NA	C	coding	284	855	110	964	10.0	-2	True	AATAAA	-22
PB.9577.4	chr5	-	2117	10	full-splice_match	SPARC	ENST00000231061.8	3701	10	235	1349	33	43	multi-exon	FALSE	canonical	1	6462067	junction_9	1245753.4844703425	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	80	991	20.0	2	True	AATAAA	-13
PB.10377.4	chr7	+	2869	17	full-splice_match	AP5Z1	ENST00000649063.1	2872	17	10	-7	-7	3	multi-exon	FALSE	canonical	1	155878	junction_5	52373.39326678522	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	72	2495	25.0	10	True	AGTAAA	-24
PB.6761.2	chr2	+	4727	11	full-splice_match	SPOPL	ENST00000280098.8	6025	11	56	1242	56	-1242	multi-exon	FALSE	canonical	1	76007	junction_4	30810.40019928336	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	324	1502	45.0	-193	False	AATAAA	-29
PB.7690.5	chr22	+	2484	17	full-splice_match	NF2	ENST00000361166.8	1837	17	-390	-257	-8	118	multi-exon	FALSE	canonical	1	145968	junction_15	64166.29317530642	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	391	2163	15.0	-32	True	NA	NA
PB.6761.5	chr2	+	2739	11	novel_in_catalog	SPOPL	novel	6025	11	NA	NA	-65	1268	combination_of_known_junctions	FALSE	canonical	1	34877	junction_3	41233.98515108623	NA	3	1	TRUE	NA	NA	NA	C	coding	276	831	591	1421	40.0	-183	False	TATAAA	-17
PB.4536.2	chr16	-	8019	19	full-splice_match	PHLPP2	ENST00000567016.1	4812	19	-25	-3182	-25	-60	multi-exon	FALSE	canonical	1	17138	junction_16	20149.853061376445	NA	1	NA	TRUE	NA	NA	NA	C	coding	1358	4077	41	4117	75.0	-23	True	NA	NA
PB.6415.1	chr2	+	1236	6	novel_in_catalog	CEBPZOS	novel	3158	5	NA	NA	-2	-48	combination_of_known_junctions	TRUE	canonical	1	7727	junction_1	243270.97007657943	NA	3	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-4	True	NA	NA
PB.6761.4	chr2	+	5560	11	novel_not_in_catalog	SPOPL	novel	6025	11	NA	NA	63	-315	intron_retention	FALSE	canonical	1	2575	junction_6	45727.25794490634	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	317	1408	15.0	-186	False	AATAAA	-23
PB.9315.5	chr5	+	2898	15	full-splice_match	TENT2	ENST00000453514.5	3523	15	624	1	426	-1	multi-exon	FALSE	canonical	1	181099	junction_6	84288.01064647212	NA	2	1	TRUE	NA	NA	NA	C	coding	484	1455	70	1524	5.0	-1076	False	AATAAA	-20
PB.7796.4	chr22	+	3320	11	novel_in_catalog	TAB1	novel	3237	11	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	1346	junction_1	78818.42195584734	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	646	1662	20.0	-10	True	AATAAA	-26
PB.6761.6	chr2	+	1823	11	full-splice_match	SPOPL	ENST00000280098.8	6025	11	103	4099	-28	318	multi-exon	FALSE	canonical	1	76007	junction_4	30810.40019928336	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	277	1455	60.0	-3	True	NA	NA
PB.7796.1	chr22	+	3199	11	full-splice_match	TAB1	ENST00000216160.10	3237	11	36	2	-1	-2	multi-exon	FALSE	canonical	1	127380	junction_1	48436.9670777393	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	27	1541	20.0	-15	True	AATAAA	-26
PB.7796.2	chr22	+	3306	11	novel_not_in_catalog	TAB1	novel	3237	11	NA	NA	2	-2	any annotated donor/acceptor	TRUE	canonical	1	1306	junction_7	81046.4644953745	NA	4	2	TRUE	NA	NA	NA	C	coding	317	954	24	977	20.0	-12	True	AATAAA	-26
PB.7796.3	chr22	+	5022	10	incomplete-splice_match	TAB1	ENST00000216160.10	3237	11	39	7	2	-7	intron_retention	FALSE	canonical	1	127380	junction_1	50016.72106134503	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	24	1334	25.0	-12	True	AATAAA	-21
PB.1229.2	chr1	+	1877	5	novel_not_in_catalog	FMN2	novel	6434	18	NA	NA	-51469	-1	any annotated donor/acceptor	FALSE	canonical	1	165	junction_1	43522.37854828249	NA	7	NA	TRUE	NA	NA	NA	B	coding	10	33	483	515	40.0	-430	False	AATAAA	-29
PB.7477.4	chr21	-	3795	6	full-splice_match	N6AMT1	ENST00000303775.9	4865	6	-3	1073	-3	-1073	multi-exon	FALSE	canonical	1	27263	junction_1	21875.46531985091	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	30	674	25.0	-10	True	NA	NA
PB.7477.5	chr21	-	2318	5	full-splice_match	N6AMT1	ENST00000351429.7	4781	5	22	2441	22	-2441	multi-exon	FALSE	canonical	1	27263	junction_1	18995.813135728094	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	5	565	15.0	15	True	NA	NA
PB.7477.6	chr21	-	2414	6	full-splice_match	N6AMT1	ENST00000303775.9	4865	6	1	2450	1	-2450	multi-exon	FALSE	canonical	1	27263	junction_1	21875.46531985091	NA	4	NA	TRUE	NA	NA	NA	C	coding	214	645	26	670	20.0	-6	True	NA	NA
PB.10377.3	chr7	+	4401	17	full-splice_match	AP5Z1	ENST00000649063.1	2872	17	3	-1532	0	-1111	multi-exon	FALSE	canonical	1	155878	junction_5	52373.39326678522	NA	3	NA	TRUE	NA	NA	NA	C	coding	807	2424	79	2502	35.0	3	True	AATAAA	-13
PB.7477.1	chr21	-	2260	7	full-splice_match	N6AMT1	ENST00000460212.1	1293	7	0	-967	0	967	multi-exon	FALSE	canonical	1	21319	junction_1	25070.262016093002	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	27	671	25.0	-7	True	NA	NA
PB.7477.2	chr21	-	4872	6	full-splice_match	N6AMT1	ENST00000303775.9	4865	6	-4	-3	-4	3	multi-exon	FALSE	canonical	1	27263	junction_1	21875.46531985091	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	31	675	20.0	-11	True	NA	NA
PB.7477.3	chr21	-	4781	5	full-splice_match	N6AMT1	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	1	27263	junction_1	18995.813135728094	NA	4	1	TRUE	NA	NA	NA	C	coding	186	561	27	587	10.0	-7	True	NA	NA
PB.9315.4	chr5	+	2841	12	novel_in_catalog	TENT2	novel	781	5	NA	NA	0	23	intron_retention	FALSE	canonical	1	802	junction_1	156396.87024658013	NA	2	1	TRUE	NA	NA	NA	C	coding	229	690	763	1452	10.0	-6	True	AATAAA	-40
PB.7024.9	chr2	+	2441	14	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	39006	junction_2	143756.7001220337	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	252	2237	30.0	-18	True	AATAAA	-12
PB.4533.4	chr16	-	2748	19	full-splice_match	VAC14	ENST00000261776.9	3099	19	324	27	145	-24	multi-exon	FALSE	canonical	1	226448	junction_17	62017.59790714922	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	640	2286	75.0	4245	False	NA	NA
PB.11521.1	chr9	+	6394	39	full-splice_match	UNC13B	ENST00000378495.7	6303	39	-91	0	-21	0	multi-exon	TRUE	canonical	1	78585	junction_1	58584.092399586094	NA	0	NA	TRUE	NA	NA	NA	C	coding	1591	4776	314	5089	10.0	-8	True	AATAAA	-17
PB.4533.6	chr16	-	2809	14	incomplete-splice_match	VAC14	ENST00000261776.9	3099	19	-7	43176	-7	660	3prime_fragment	FALSE	canonical	1	226448	junction_12	66827.79984478522	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	269	2134	100.0	-11	True	NA	NA
PB.4533.7	chr16	-	2035	13	novel_not_in_catalog	VAC14	novel	2151	13	NA	NA	2	23822	any annotated donor/acceptor	FALSE	canonical	1	3060	junction_1	105712.10766783712	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	259	1686	50.0	-1	True	AAGAAA	-24
PB.4533.1	chr16	-	7067	19	novel_not_in_catalog	VAC14	novel	702	2	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	15421	junction_1	92749.81194185787	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	273	2645	15.0	-15	True	AATAAA	-20
PB.3833.10	chr15	-	2227	11	incomplete-splice_match	SPG11	ENST00000559193.5	2579	12	-18	3901	-1	-3901	3prime_fragment	FALSE	canonical	1	127580	junction_10	45111.87085413328	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2196	30	2225	70.0	-15	True	NA	NA
PB.4533.3	chr16	-	3214	19	novel_not_in_catalog	VAC14	novel	702	2	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	canonical	1	3195	junction_16	94764.49285069804	NA	1	NA	TRUE	NA	NA	NA	C	coding	819	2460	271	2730	15.0	-13	True	AATAAA	-17
PB.8933.4	chr4	-	2131	12	full-splice_match	CFI	ENST00000512148.5	1914	12	-189	-28	5	0	multi-exon	FALSE	canonical	1	19673	junction_6	95666.48809585854	NA	0	NA	TRUE	NA	NA	NA	A	coding	576	1731	204	1934	40.0	15	False	AATAAA	-17
PB.8933.1	chr4	-	2104	12	novel_not_in_catalog	AC126283.2	novel	2385	15	NA	NA	-122	-26778	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	100185.08086701622	NA	5	1	TRUE	NA	NA	NA	B	coding	296	891	151	1041	45.0	-13	True	AATAAA	-19
PB.8933.2	chr4	-	2151	13	novel_not_in_catalog	AC126283.2	novel	2385	15	NA	NA	-147	-26780	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	117186.90363009735	NA	3	1	TRUE	NA	NA	NA	B	coding	592	1779	176	1954	40.0	2	True	AATAAA	-17
PB.8933.3	chr4	-	2304	12	novel_not_in_catalog	AC126283.2	novel	2385	15	NA	NA	-52	-26780	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	124013.56156578766	NA	5	1	TRUE	NA	NA	NA	B	coding	296	891	81	971	40.0	138	False	AATAAA	-17
PB.791.6	chr1	+	2846	21	novel_in_catalog	ADAM15	novel	1181	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	6364	junction_1	256746.8754953943	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	79	2574	10.0	-7	True	AATAAA	-20
PB.11780.36	chr9	+	3029	10	full-splice_match	NEK6	ENST00000394199.6	2535	10	-494	0	27	0	multi-exon	FALSE	canonical	1	50583	junction_1	214036.87481320236	NA	10	NA	TRUE	NA	NA	NA	C	coding	347	1044	495	1538	30.0	396	False	AATAAA	-41
PB.11780.35	chr9	+	2200	10	full-splice_match	NEK6	ENST00000539416.5	2582	10	23	359	23	-359	multi-exon	FALSE	canonical	1	2681	junction_1	227777.9397161484	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	127	1068	40.0	392	False	TATAAA	-9
PB.9002.31	chr4	-	2879	7	incomplete-splice_match	INPP4B	ENST00000512630.5	2953	25	108863	153724	-172	2071	internal_fragment	FALSE	canonical	1	116117	junction_6	24712.644392878898	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-8	True	NA	NA
PB.11780.33	chr9	+	1818	11	novel_in_catalog	NEK6	novel	2578	10	NA	NA	-52	-981	no_combination_of_known_junctions	FALSE	canonical	1	3295	junction_1	270618.41139480885	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	265	1308	25.0	317	False	GATAAA	-24
PB.9436.2	chr5	+	2303	7	full-splice_match	PDLIM4	ENST00000253754.7	2282	7	-23	2	-23	-2	multi-exon	FALSE	canonical	1	224053	junction_5	68949.8955685697	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	88	1080	25.0	0	True	NA	NA
PB.9436.1	chr5	+	1185	7	full-splice_match	PDLIM4	ENST00000253754.7	2282	7	-27	1124	-27	-2	multi-exon	TRUE	canonical	1	224053	junction_5	68949.8955685697	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	92	1084	15.0	-4	True	AATAAA	-20
PB.9315.7	chr5	+	3559	15	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	6	-6	intron_retention	FALSE	canonical	1	29253	junction_7	120548.25372913064	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	673	2190	10.0	0	True	AATAAA	-15
PB.11625.75	chr9	-	2014	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	871364.6751391445	NA	4	2	TRUE	NA	NA	NA	B	coding	439	1320	198	1517	10.0	-1	True	AATAAA	-13
PB.6620.1	chr2	-	2317	12	full-splice_match	MRPS5	ENST00000272418.6	1652	12	190	-855	3	855	multi-exon	TRUE	canonical	1	410612	junction_2	94791.11857880719	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	20	1312	10.0	-10	True	NA	NA
PB.368.1	chr1	+	2992	8	full-splice_match	BTBD19	ENST00000450269.5	1572	8	35	-1455	-6	-1	multi-exon	TRUE	canonical	1	20963	junction_2	6242.930342820278	NA	1	NA	TRUE	NA	NA	NA	A	coding	291	876	305	1180	35.0	-6	True	NA	NA
PB.3250.14	chr13	-	3279	3	full-splice_match	ARGLU1	ENST00000472226.2	4009	3	-21	751	6	-250	multi-exon	FALSE	canonical	1	1629779	junction_2	184912.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	240	1061	80.0	-22	True	NA	NA
PB.11625.71	chr9	-	1992	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	164	1552	10.0	-1	True	AATAAA	-13
PB.11625.70	chr9	-	2098	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	791174.2604600386	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	210	1601	10.0	-13	True	AATAAA	-13
PB.11625.73	chr9	-	2075	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	811826.2383334457	NA	2	1	TRUE	NA	NA	NA	B	coding	222	669	910	1578	10.0	-27	True	AATAAA	-13
PB.11625.72	chr9	-	2036	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	790309.6513899389	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	220	1539	10.0	-16	True	AATAAA	-13
PB.11625.79	chr9	-	4981	13	novel_in_catalog	HNRNPK	novel	2928	17	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	552918	junction_3	637194.1764176572	NA	0	NA	TRUE	NA	NA	NA	B	coding	101	306	214	519	10.0	340	False	AATAAA	-13
PB.4523.2	chr16	-	2342	8	novel_in_catalog	NOB1	novel	1734	9	NA	NA	-25	-5	intron_retention	FALSE	canonical	1	97372	junction_5	157969.2897775271	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	56	925	15.0	3105	False	AATAAA	-14
PB.4523.1	chr16	-	1681	9	full-splice_match	NOB1	ENST00000268802.9	1734	9	14	39	-2	-39	multi-exon	FALSE	canonical	1	97372	junction_6	159583.9809265309	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	17	1255	60.0	-3	True	NA	NA
PB.4523.5	chr16	-	1632	9	full-splice_match	NOB1	ENST00000268802.9	1734	9	-30	132	-30	-132	multi-exon	FALSE	canonical	1	97372	junction_6	159583.9809265309	NA	5	1	TRUE	NA	NA	NA	C	coding	412	1239	61	1299	30.0	3100	False	AATAAA	-31
PB.4523.4	chr16	-	1697	9	novel_in_catalog	NOB1	novel	1734	9	NA	NA	-1	-5	combination_of_known_junctions	TRUE	canonical	1	22530	junction_3	168970.02563897983	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	32	1237	15.0	-18	True	AATAAA	-14
PB.7675.1	chr22	-	3140	11	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	0	241	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_7	207055.5760851661	NA	2	1	TRUE	NA	NA	NA	B	coding	270	813	54	866	20.0	11	True	AGTAAA	-20
PB.7675.2	chr22	-	2886	11	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	5	-31	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	207055.5760851661	NA	2	1	TRUE	NA	NA	NA	B	coding	270	813	73	885	65.0	-8	True	NA	NA
PB.7675.3	chr22	-	2823	10	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	272918.7602924276	NA	2	1	TRUE	NA	NA	NA	B	coding	271	816	64	879	5.0	1	True	NA	NA
PB.7675.4	chr22	-	4077	10	novel_in_catalog	PITPNB	novel	2926	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	512606	junction_4	89797.15282227859	NA	0	NA	TRUE	NA	NA	NA	B	coding	169	510	1536	2045	10.0	1	True	NA	NA
PB.3375.7	chr14	+	5166	10	novel_not_in_catalog	AKAP6	novel	15006	14	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	172	junction_1	23768.387520682452	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	734	3235	25.0	-19	True	AATAAA	-18
PB.7675.6	chr22	-	3133	12	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	290701.35360290634	NA	3	2	TRUE	NA	NA	NA	B	coding	203	612	83	694	10.0	865	False	NA	NA
PB.7675.7	chr22	-	2949	11	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	-11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	260432.20098551564	NA	2	1	TRUE	NA	NA	NA	B	coding	272	819	99	917	10.0	30	True	NA	NA
PB.3375.1	chr14	+	3293	3	novel_not_in_catalog	AKAP6	novel	15006	14	NA	NA	-14809	2490	any annotated donor/acceptor	FALSE	canonical	1	2013	junction_2	87.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	111	336	130	465	25.0	1	True	AATAAA	-16
PB.9505.1	chr5	+	3822	1	full-splice_match	PCDHA10	ENST00000562220.2	12358	1	5	8531	5	-8531	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	844	2535	162	2696	60.0	-41	True	AATAAA	-32
PB.11148.3	chr8	-	2174	9	full-splice_match	CA8	ENST00000317995.4	3812	9	12	1626	12	-1626	multi-exon	FALSE	canonical	1	51015	junction_8	20332.34340742601	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	254	1126	45.0	-1	True	NA	NA
PB.11148.2	chr8	-	3053	9	full-splice_match	CA8	ENST00000317995.4	3812	9	12	747	12	-747	multi-exon	FALSE	canonical	1	51015	junction_8	20332.34340742601	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	254	1126	20.0	-1	True	AGTAAA	-25
PB.11148.1	chr8	-	5732	9	full-splice_match	CA8	ENST00000317995.4	3812	9	13	-1933	13	1933	multi-exon	TRUE	canonical	1	51015	junction_8	20332.34340742601	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	253	1125	20.0	0	True	NA	NA
PB.9220.22	chr5	+	2650	23	incomplete-splice_match	PARP8	ENST00000505554.5	3825	26	92083	1040	91747	-7	5prime_fragment	FALSE	canonical	1	181803	junction_4	46131.73514160962	NA	3	NA	TRUE	NA	NA	NA	C	coding	607	1824	561	2384	30.0	NA	False	AATAAA	-7
PB.9220.21	chr5	+	2737	25	novel_not_in_catalog	PARP8	novel	597	7	NA	NA	29	101	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67390.98107209432	NA	3	2	TRUE	NA	NA	NA	C	coding	607	1824	813	2636	45.0	4	True	TATAAA	-23
PB.9562.1	chr5	-	4052	5	novel_not_in_catalog	RPS14	novel	2314	5	NA	NA	-10	14780	any annotated donor/acceptor	FALSE	canonical	1	6324	junction_1	6788762.7659920985	NA	2	NA	TRUE	NA	NA	NA	C	coding	138	417	38	454	40.0	1	True	NA	NA
PB.3375.2	chr14	+	3814	10	novel_not_in_catalog	AKAP6	novel	15006	14	NA	NA	-14807	384	any annotated donor/acceptor	FALSE	canonical	1	2188	junction_1	19648.26952390339	NA	1	NA	TRUE	NA	NA	NA	C	coding	1072	3219	128	3346	70.0	3	True	NA	NA
PB.694.1	chr1	+	4405	9	novel_in_catalog	BCL9	novel	6278	10	NA	NA	89	-2872	combination_of_known_junctions	FALSE	canonical	1	32811	junction_5	44132.6458921001	NA	1	NA	TRUE	NA	NA	NA	C	coding	990	2973	652	3624	30.0	0	True	ATTAAA	-13
PB.5150.8	chr17	+	5391	32	full-splice_match	CLTC	ENST00000269122.7	7760	32	51	2318	-15	-122	multi-exon	FALSE	canonical	1	1037811	junction_1	612872.7060856395	NA	2	NA	TRUE	NA	NA	NA	C	coding	1675	5028	224	5251	30.0	4	True	NA	NA
PB.5150.9	chr17	+	4941	29	incomplete-splice_match	CLTC	ENST00000393043.5	5292	31	37	5501	-29	816	3prime_fragment	FALSE	canonical	1	1037811	junction_1	519020.3121299242	NA	1	NA	TRUE	NA	NA	NA	C	coding	1545	4638	238	4875	35.0	-10	True	AATAAA	-21
PB.5150.2	chr17	+	6531	32	full-splice_match	CLTC	ENST00000269122.7	7760	32	34	1195	-32	3	multi-exon	FALSE	canonical	1	1037811	junction_1	612872.7060856395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1675	5028	241	5268	25.0	-13	True	AATAAA	-21
PB.5150.3	chr17	+	4668	23	novel_not_in_catalog	CLTC	novel	8587	32	NA	NA	1	-349	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	737456.8825717195	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	436	2826	55.0	-10	True	AATAAA	-15
PB.6121.1	chr19	+	2837	7	full-splice_match	SPHK2	ENST00000245222.8	2963	7	127	-1	-32	0	multi-exon	FALSE	canonical	1	48370	junction_1	65691.56184629466	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	240	2204	10.0	-88	True	AATAAA	-24
PB.5150.1	chr17	+	6083	32	full-splice_match	CLTC	ENST00000269122.7	7760	32	130	1547	45	-349	multi-exon	FALSE	canonical	1	1037811	junction_1	612872.7060856395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1675	5028	145	5172	55.0	-4493	False	AATAAA	-15
PB.5150.6	chr17	+	5644	32	full-splice_match	CLTC	ENST00000269122.7	7760	32	48	2068	-18	128	multi-exon	FALSE	canonical	1	1037811	junction_1	612872.7060856395	NA	0	NA	TRUE	NA	NA	NA	C	coding	1675	5028	227	5254	35.0	1	True	NA	NA
PB.5150.7	chr17	+	6238	33	novel_not_in_catalog	CLTC	novel	8587	32	NA	NA	-29	-349	any annotated donor/acceptor	FALSE	canonical	1	17559	junction_32	714652.7286101287	NA	0	NA	TRUE	NA	NA	NA	C	coding	1649	4950	238	5187	55.0	-10	True	AATAAA	-15
PB.5150.4	chr17	+	6214	33	novel_in_catalog	CLTC	novel	8587	32	NA	NA	20	-349	combination_of_known_junctions	FALSE	canonical	1	117199	junction_31	719280.8915396313	NA	2	NA	TRUE	NA	NA	NA	C	coding	1682	5049	255	5303	55.0	-4603	False	AATAAA	-15
PB.5150.5	chr17	+	5129	31	full-splice_match	CLTC	ENST00000393043.5	5292	31	4	159	4	-159	multi-exon	FALSE	canonical	1	1037811	junction_1	565217.3163775239	NA	0	NA	TRUE	NA	NA	NA	C	coding	1619	4857	271	5127	65.0	-7	True	GATAAA	-24
PB.1344.2	chr10	+	4892	7	full-splice_match	RAB18	ENST00000356940.10	4886	7	18	-24	-13	1	multi-exon	FALSE	canonical	1	589639	junction_1	178127.847109332	NA	2	NA	TRUE	NA	NA	NA	C	coding	206	621	85	705	15.0	-18	True	NA	NA
PB.4177.1	chr16	+	1641	10	full-splice_match	TEDC2	ENST00000361837.8	1662	10	20	1	-2	0	multi-exon	FALSE	canonical	1	41063	junction_1	38973.53846450748	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	46	1347	15.0	-9	True	ATTAAA	-16
PB.4177.2	chr16	+	1871	9	novel_in_catalog	TEDC2	novel	1662	10	NA	NA	-7	0	intron_retention	FALSE	canonical	1	41063	junction_1	39917.4121920419	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	777	1577	15.0	2	True	ATTAAA	-16
PB.6212.2	chr19	-	2357	9	novel_in_catalog	AC011476.2	novel	1271	6	NA	NA	-9219	-16750	no_combination_of_known_junctions	FALSE	canonical	1	5733	junction_5	68490.53423284125	NA	0	NA	TRUE	NA	NA	NA	B	coding	116	351	116	466	85.0	0	True	NA	NA
PB.6212.3	chr19	-	1841	7	full-splice_match	RDH13	ENST00000415061.7	1871	7	30	0	2	0	multi-exon	FALSE	canonical	1	72649	junction_6	42442.50823336068	NA	1	NA	TRUE	NA	NA	NA	A	coding	331	996	115	1110	85.0	1	True	NA	NA
PB.6212.1	chr19	-	2121	7	novel_in_catalog	AC011476.2	novel	1271	6	NA	NA	-9211	-16745	no_combination_of_known_junctions	FALSE	canonical	1	8852	junction_1	62672.86056092293	NA	1	NA	TRUE	NA	NA	NA	B	coding	313	942	108	1049	80.0	8	True	TTTAAA	-3
PB.10661.1	chr7	-	3924	3	full-splice_match	MTERF1	ENST00000351870.7	1997	3	18	-1945	0	-17	multi-exon	FALSE	canonical	1	75019	junction_2	4790.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	77	1276	95.0	-1	True	NA	NA
PB.10661.2	chr7	-	3272	3	full-splice_match	MTERF1	ENST00000351870.7	1997	3	14	-1289	-4	-673	multi-exon	FALSE	canonical	1	75019	junction_2	4790.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	81	1280	5.0	-5	True	NA	NA
PB.10661.4	chr7	-	2108	4	full-splice_match	MTERF1	ENST00000406735.6	1639	4	-35	-434	-7	3	multi-exon	FALSE	canonical	1	11368	junction_2	29518.14760448223	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	263	1402	45.0	-26	True	AATAAA	-21
PB.10661.5	chr7	-	1969	3	full-splice_match	MTERF1	ENST00000351870.7	1997	3	30	-2	0	2	multi-exon	FALSE	canonical	1	75019	junction_2	4790.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	65	1264	45.0	11	True	AATAAA	-20
PB.10661.6	chr7	-	4892	2	incomplete-splice_match	MTERF1	ENST00000351870.7	1997	3	18	2377	0	-614	3prime_fragment	FALSE	canonical	1	75019	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.10661.7	chr7	-	5267	1	novel_in_catalog	MTERF1	novel	3882	2	NA	NA	0	-782	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.9210.8	chr5	-	3530	11	novel_not_in_catalog	HMGCS1	novel	3506	11	NA	NA	-3	1	intron_retention	FALSE	canonical	1	19372	junction_10	420880.42506441183	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	231	1793	20.0	-19	False	AATAAA	-21
PB.1243.1	chr1	-	1753	9	novel_not_in_catalog	TFB2M	novel	1848	8	NA	NA	-666	-6	any annotated donor/acceptor	FALSE	canonical	1	5673	junction_8	116222.60761546137	NA	0	NA	TRUE	NA	NA	NA	B	coding	230	693	596	1288	25.0	-730	False	ATTAAA	-12
PB.7766.1	chr22	+	2089	5	full-splice_match	POLR2F	ENST00000442738.6	2106	5	16	1	16	-1	multi-exon	FALSE	canonical	1	1384481	junction_3	208840.20031234407	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	110	493	10.0	-20	True	AATAAA	-15
PB.9315.3	chr5	+	3099	16	novel_in_catalog	TENT2	novel	781	5	NA	NA	-10	-6	combination_of_known_junctions	FALSE	canonical	1	32616	junction_1	113710.0382914758	NA	1	1	TRUE	NA	NA	NA	C	coding	484	1455	276	1730	10.0	-1557	False	AATAAA	-15
PB.7485.2	chr21	+	3219	4	incomplete-splice_match	BACH1	ENST00000286800.7	5669	5	-38	15193	-38	4457	3prime_fragment	FALSE	canonical	1	120279	junction_1	121601.66530749304	NA	3	NA	TRUE	NA	NA	NA	C	coding	621	1866	182	2047	85.0	3	True	AATAGA	-40
PB.8005.3	chr3	-	6344	36	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	69239	junction_12	94906.36059067993	NA	1	1	TRUE	NA	NA	NA	C	coding	1491	4476	231	4706	35.0	7	True	AATAAA	-29
PB.7186.11	chr20	+	2660	3	novel_in_catalog	MGME1	novel	2336	5	NA	NA	-7	-7	intron_retention	FALSE	canonical	1	11080	junction_2	91192.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	759	1499	20.0	8	True	AATAAA	-15
PB.7186.10	chr20	+	2441	2	novel_in_catalog	MGME1	novel	2336	5	NA	NA	-8	-7	intron_retention	FALSE	canonical	1	10303	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	760	1512	20.0	7	True	AATAAA	-15
PB.7453.3	chr21	+	3259	5	intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-18
PB.7186.12	chr20	+	1485	3	novel_in_catalog	MGME1	novel	2336	5	NA	NA	-74	-6	no_combination_of_known_junctions	FALSE	canonical	1	9015	junction_1	150844.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2622	False	AATAAA	-16
PB.7469.1	chr21	+	2576	1	novel_in_catalog	LINC01684	novel	2908	6	NA	NA	9	-10000	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	11	True	NA	NA
PB.7186.14	chr20	+	2365	3	incomplete-splice_match	MGME1	ENST00000377709.1	1936	5	5781	2	4797	-2	5prime_fragment	FALSE	canonical	1	227948	junction_1	41378.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	725	1354	15.0	2275	False	AATAAA	-20
PB.8838.7	chr4	+	3968	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	-21	1646	-21	-1646	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	223	1512	70.0	-9590	False	NA	NA
PB.6228.1	chr19	+	1907	5	full-splice_match	ZNF444	ENST00000337080.7	2042	5	135	0	1	0	multi-exon	FALSE	canonical	1	107022	junction_1	46073.56824891578	NA	1	NA	TRUE	NA	NA	NA	A	coding	327	984	233	1216	15.0	-1	True	AATAAA	-21
PB.474.15	chr1	-	2386	11	novel_not_in_catalog	ZRANB2	novel	3078	10	NA	NA	-25	-456	any annotated donor/acceptor	FALSE	canonical	1	35677	junction_2	362121.5727829675	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	42	974	65.0	-2	True	AATAAA	-31
PB.76.3	chr1	+	3814	11	full-splice_match	TMEM201	ENST00000340381.10	3776	11	-11	-27	-11	3	multi-exon	FALSE	canonical	1	56375	junction_7	48206.293585381565	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	21	2021	5.0	0	True	AAAAAG	-32
PB.474.14	chr1	-	1959	12	novel_not_in_catalog	ZRANB2	novel	3078	10	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	384662.76069803623	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	25	987	20.0	15	True	AATAAA	-14
PB.9315.2	chr5	+	3123	16	full-splice_match	TENT2	ENST00000296783.7	3129	16	0	6	0	-6	multi-exon	FALSE	canonical	1	42937	junction_1	111928.27259983163	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	300	1754	10.0	0	True	AATAAA	-15
PB.4167.1	chr16	-	2387	5	incomplete-splice_match	NTHL1	ENST00000219066.5	1067	6	22	0	3	0	intron_retention	FALSE	canonical	1	342964	junction_4	25381.77909815425	NA	0	NA	TRUE	NA	NA	NA	A	coding	287	864	1415	2278	10.0	-11	True	AATAAA	-23
PB.474.13	chr1	-	4341	1	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-128	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-12
PB.6548.1	chr2	-	4058	14	full-splice_match	SFXN5	ENST00000272433.6	4140	14	84	-2	-24	2	multi-exon	FALSE	canonical	1	70635	junction_13	29236.089666407996	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	48	1070	15.0	9122	False	AATAAA	-19
PB.6548.2	chr2	-	3918	13	novel_in_catalog	SFXN5	novel	4072	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	14155	junction_1	42256.58166257128	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	28	873	15.0	-24	True	AATAAA	-17
PB.474.12	chr1	-	5907	8	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-22	-3	intron_retention	FALSE	canonical	1	629165	junction_2	204752.96692824346	NA	20	NA	TRUE	NA	NA	NA	C	coding	228	687	39	725	35.0	1	True	AATAAA	-13
PB.11186.10	chr8	-	1797	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-37	441	-2	-438	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	41	496	65.0	-3	True	NA	NA
PB.1853.12	chr11	+	2406	17	novel_not_in_catalog	ZDHHC13	novel	458	5	NA	NA	5	-2	any annotated donor/acceptor	FALSE	canonical	1	5633	junction_1	55061.867443266434	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	475	1953	15.0	-7	True	AATAAA	-14
PB.1853.13	chr11	+	2650	18	novel_in_catalog	ZDHHC13	novel	458	5	NA	NA	12	-4	no_combination_of_known_junctions	FALSE	canonical	1	296	junction_1	67125.4671038499	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	721	2199	15.0	0	True	AATAAA	-12
PB.1853.10	chr11	+	3283	16	novel_not_in_catalog	ZDHHC13	novel	458	5	NA	NA	1	-2	intron_retention	FALSE	canonical	1	5633	junction_1	55660.157659216966	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	479	1342	15.0	-11	True	AATAAA	-14
PB.8838.1	chr4	+	1799	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	88	3706	-18	87	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	114	1403	25.0	0	True	ACTAAA	-19
PB.6805.16	chr2	+	1355	2	full-splice_match	TANK	ENST00000477952.1	427	2	4	-932	-1	-307	multi-exon	FALSE	canonical	1	49078	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	3	True	NA	NA
PB.8592.1	chr3	+	3627	1	incomplete-splice_match	LPP	ENST00000618621.4	18277	11	674111	1	128305	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	352	False	AATAAA	-16
PB.6805.14	chr2	+	1585	8	full-splice_match	TANK	ENST00000392749.6	2171	8	131	455	0	69	multi-exon	FALSE	canonical	1	288058	junction_1	105194.08182895431	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	109	1386	85.0	0	True	TTTAAA	-35
PB.6805.15	chr2	+	1713	9	novel_in_catalog	TANK	novel	2152	8	NA	NA	0	69	combination_of_known_junctions	FALSE	canonical	1	32704	junction_2	218643.06704389091	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	63	1514	85.0	0	True	TTTAAA	-35
PB.1245.12	chr1	-	6093	33	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	47	11151	47	-392	3prime_fragment	FALSE	canonical	1	25	junction_17	22743.988367099853	NA	0	NA	TRUE	NA	NA	NA	C	coding	1914	5742	351	6092	65.0	3	True	NA	NA
PB.6080.1	chr19	+	2829	3	full-splice_match	CD3EAP	ENST00000309424.7	3286	3	419	38	-34	-38	multi-exon	FALSE	canonical	1	132989	junction_1	35221.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	510	1533	70	1602	10.0	-3682	False	NA	NA
PB.10596.11	chr7	-	2926	7	novel_in_catalog	TBL2	novel	4560	7	NA	NA	-4	-8	intron_retention	FALSE	canonical	1	23134	junction_2	157073.51030939835	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	55	867	50.0	-25	True	NA	NA
PB.6080.3	chr19	+	3189	2	full-splice_match	CD3EAP	ENST00000592852.1	1061	2	-10	-2118	-10	-29	multi-exon	FALSE	canonical	1	203432	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	955	1953	0.0	8	True	NA	NA
PB.6080.2	chr19	+	1870	3	full-splice_match	CD3EAP	ENST00000309424.7	3286	3	435	981	-18	-1	multi-exon	FALSE	canonical	1	132989	junction_1	35221.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	54	1586	15.0	0	True	ATTAAA	-20
PB.6068.2	chr19	+	1248	4	full-splice_match	APOE	ENST00000434152.5	864	4	-14	-370	2	2	multi-exon	FALSE	canonical	1	101479	junction_1	3576680.9522338817	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	72	1103	5.0	2	True	AATAAA	-23
PB.11349.8	chr8	-	1674	7	novel_not_in_catalog	ZFAT	novel	4273	14	NA	NA	-5891	1	any annotated donor/acceptor	FALSE	canonical	1	349	junction_6	71774.74216293331	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	204	983	15.0	-5891	False	AATAAA	-15
PB.11349.9	chr8	-	1459	6	novel_in_catalog	ZFAT	novel	4273	14	NA	NA	562	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	94776.54964261992	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	863	1210	15.0	562	False	AATAAA	-14
PB.6068.1	chr19	+	1167	4	full-splice_match	APOE	ENST00000252486.8	1208	4	40	1	-2	-1	multi-exon	FALSE	canonical	1	3772405	junction_1	2000802.705008334	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	72	1025	5.0	-2	True	AATAAA	-20
PB.6303.1	chr2	+	2257	18	full-splice_match	CPSF3	ENST00000238112.7	2345	18	87	1	4	-1	multi-exon	FALSE	canonical	1	319804	junction_1	133566.08789239463	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	120	2174	20.0	1	True	AATAAA	-22
PB.6303.3	chr2	+	2522	18	novel_in_catalog	CPSF3	novel	2345	18	NA	NA	-23	8	combination_of_known_junctions	FALSE	canonical	1	5162	junction_1	181613.40770010045	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	487	2430	30.0	-3	True	AATAAA	-31
PB.7774.3	chr22	-	2115	1	novel_in_catalog	TPTEP2-CSNK1E	novel	1770	15	NA	NA	4130	-100360	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	18	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	4522	False	NA	NA
PB.6303.5	chr2	+	2152	17	novel_in_catalog	CPSF3	novel	2345	18	NA	NA	-20	-1	no_combination_of_known_junctions	FALSE	canonical	1	1106	junction_3	196279.3300596177	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	144	2069	20.0	0	True	AATAAA	-22
PB.8838.8	chr4	+	5490	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	-15	118	-15	-118	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	217	1506	25.0	-9584	False	NA	NA
PB.6303.7	chr2	+	1910	15	incomplete-splice_match	CPSF3	ENST00000238112.7	2345	18	69	13496	-14	11255	3prime_fragment	FALSE	canonical	1	319804	junction_1	123267.0724088347	NA	9	2	TRUE	NA	NA	NA	C	coding	591	1773	138	1910	65.0	6	True	NA	NA
PB.6303.6	chr2	+	3624	17	novel_in_catalog	CPSF3	novel	2345	18	NA	NA	-15	0	intron_retention	FALSE	canonical	1	1691	junction_15	192674.92475312165	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	2229	3149	20.0	5	True	AATAAA	-20
PB.6303.9	chr2	+	1619	13	incomplete-splice_match	CPSF3	ENST00000460593.1	3157	18	9985	-6	-7861	0	5prime_fragment	FALSE	canonical	1	495348	junction_1	101943.06923379125	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	48	1538	20.0	9881	False	AATAAA	-20
PB.10615.1	chr7	+	1818	6	novel_not_in_catalog	STAG3L1	novel	1192	8	NA	NA	-14	-479	intron_retention	FALSE	canonical	1	1107	junction_1	3986.3054273349403	NA	1	NA	TRUE	NA	NA	NA	B	coding	116	351	507	857	100.0	-51	False	NA	NA
PB.474.18	chr1	-	2182	11	full-splice_match	ZRANB2	ENST00000254821.10	2821	11	-24	663	-24	-663	multi-exon	FALSE	canonical	1	320958	junction_2	302756.1801249315	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	41	1003	10.0	-1	True	ATTAAA	-14
PB.4652.1	chr17	-	2722	3	incomplete-splice_match	MIR22HG	ENST00000577164.1	931	4	910	-1937	-13	0	5prime_fragment	FALSE	canonical	1	123833	junction_2	4798.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	17	False	AATATA	-7
PB.780.37	chr1	-	6384	16	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	0	3	intron_retention	FALSE	canonical	1	8304	junction_14	408343.0084890996	NA	11	NA	TRUE	NA	NA	NA	C	coding	892	2679	993	3671	85.0	-9	True	AATATA	-11
PB.2329.11	chr11	+	2072	1	incomplete-splice_match	ARHGEF12	ENST00000397843.6	9660	41	149874	913	9952	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-5808	False	ATTAAA	-8
PB.5717.9	chr19	+	3364	22	incomplete-splice_match	SMARCA4	ENST00000444061.8	5393	35	42229	-9	186	1	5prime_fragment	FALSE	canonical	1	328031	junction_17	315845.29427845095	NA	0	NA	TRUE	NA	NA	NA	B	coding	865	2598	303	2900	10.0	7109	False	AATAAA	-25
PB.8599.5	chr3	+	3158	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	265	-1497	265	1497	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	326	1246	60.0	-71	True	NA	NA
PB.2685.14	chr12	-	6163	29	full-splice_match	BAZ2A	ENST00000549884.5	6050	29	-125	12	-28	-12	multi-exon	FALSE	canonical	1	110836	junction_28	110159.5880569297	NA	0	NA	TRUE	NA	NA	NA	C	coding	1903	5712	215	5926	85.0	-11	True	ACTAAA	-5
PB.9691.4	chr6	-	4256	29	novel_not_in_catalog	EXOC2	novel	4449	28	NA	NA	-38	-1	any annotated donor/acceptor	FALSE	canonical	1	15611	junction_1	56555.36969520198	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	175	2949	20.0	18	False	AATAAA	-35
PB.5717.8	chr19	+	3284	23	incomplete-splice_match	SMARCA4	ENST00000647268.1	3522	25	6763	75	-83	25	5prime_fragment	FALSE	canonical	1	499804	junction_2	289177.9071413529	NA	2	NA	TRUE	NA	NA	NA	B	coding	1003	3012	24	3035	30.0	6797	False	NA	NA
PB.2685.10	chr12	-	8669	30	novel_in_catalog	BAZ2A	novel	8831	30	NA	NA	5	-3	intron_retention	FALSE	canonical	1	44055	junction_29	132774.61613514804	NA	5	NA	TRUE	NA	NA	NA	C	coding	1903	5712	273	5984	35.0	-14	True	AATAAA	-19
PB.780.35	chr1	-	6561	16	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	8	3	intron_retention	FALSE	canonical	1	524	junction_14	448191.91965086665	NA	16	NA	TRUE	NA	NA	NA	C	coding	1235	3708	141	3848	85.0	7	True	AATATA	-11
PB.2685.12	chr12	-	6233	30	novel_in_catalog	BAZ2A	novel	8831	30	NA	NA	6	-12	intron_retention	FALSE	canonical	1	44055	junction_29	132774.61613514804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1903	5712	285	5996	85.0	-26	True	ACTAAA	-5
PB.2685.13	chr12	-	6143	29	full-splice_match	BAZ2A	ENST00000551812.5	8600	29	6	2451	6	-12	multi-exon	FALSE	canonical	1	33743	junction_28	118673.4201864458	NA	0	NA	TRUE	NA	NA	NA	C	coding	1905	5718	189	5906	85.0	-26	True	ACTAAA	-5
PB.4499.1	chr16	+	3497	3	full-splice_match	PSKH1	ENST00000291041.5	3481	3	-20	4	-20	-4	multi-exon	FALSE	canonical	1	77585	junction_1	68835.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	424	1275	191	1465	15.0	-2	True	AGTAAA	-37
PB.8613.8	chr3	+	4198	14	full-splice_match	MUC20-OT1	ENST00000445430.5	4208	14	-12	22	0	-22	multi-exon	FALSE	canonical	1	1167	junction_8	42485.07636527577	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	1580	2098	70.0	-3	True	GATAAA	-17
PB.780.34	chr1	-	6439	15	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-3	3	intron_retention	FALSE	canonical	1	14240	junction_10	415280.6878844483	NA	2	NA	TRUE	NA	NA	NA	C	coding	912	2739	988	3726	85.0	-4	True	AATATA	-11
PB.8613.1	chr3	+	3729	14	full-splice_match	MUC20-OT1	ENST00000429897.5	2131	14	-14	-1584	-11	1008	multi-exon	FALSE	canonical	1	1167	junction_7	43174.46997937554	NA	9	NA	TRUE	NA	NA	NA	C	coding	166	501	1450	1950	50.0	-17	False	NA	NA
PB.8613.3	chr3	+	4253	14	novel_not_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_13	42984.1612450543	NA	11	NA	TRUE	NA	NA	NA	C	coding	150	453	1362	1814	65.0	-15	False	AATAAA	-11
PB.8613.2	chr3	+	2275	5	incomplete-splice_match	MUC20-OT1	ENST00000453324.5	1439	7	-22	3980	-11	1129	3prime_fragment	FALSE	canonical	1	2342	junction_3	42175.43790229095	NA	16	1	TRUE	NA	NA	NA	C	coding	100	303	380	682	40.0	-17	False	NA	NA
PB.8613.5	chr3	+	2181	14	full-splice_match	MUC20-OT1	ENST00000429897.5	2131	14	-4	-46	-1	46	multi-exon	FALSE	canonical	1	1167	junction_7	43174.46997937554	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	1440	1940	20.0	-7	True	AAAAAG	-37
PB.8613.4	chr3	+	2310	15	novel_not_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	1167	junction_7	43192.50102153033	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	739	1341	65.0	-15	False	AATAAA	-11
PB.8613.7	chr3	+	2277	15	novel_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1167	junction_8	41632.479058434896	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	1582	2082	65.0	-5	True	AATAAA	-11
PB.5521.11	chr18	+	2722	2	novel_not_in_catalog	SOCS6	novel	5848	2	NA	NA	816	-3	any annotated donor/acceptor	FALSE	canonical	1	5434	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	278	1885	20.0	660	False	ATTAAA	-15
PB.5717.4	chr19	+	1954	10	incomplete-splice_match	SMARCA4	ENST00000590574.6	5739	34	220	65917	220	10052	3prime_fragment	FALSE	canonical	1	13562	junction_1	265117.46060348325	NA	0	NA	TRUE	NA	NA	NA	B	coding	579	1737	218	1954	85.0	-17	True	NA	NA
PB.780.31	chr1	-	6615	15	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	-3	3	intron_retention	FALSE	canonical	1	1013	junction_14	357314.9655730778	NA	10	NA	TRUE	NA	NA	NA	C	coding	1244	3735	168	3902	85.0	-4	True	AATATA	-11
PB.303.6	chr1	-	2379	15	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	-20	131	intron_retention	FALSE	canonical	1	226807	junction_2	194065.47767006687	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	51	830	15.0	6	True	AATAAA	-43
PB.4809.1	chr17	+	4255	23	full-splice_match	LLGL1	ENST00000316843.8	4260	23	2	3	2	-3	multi-exon	FALSE	canonical	1	163298	junction_1	92442.44393867663	NA	1	NA	TRUE	NA	NA	NA	A	coding	1064	3195	95	3289	30.0	-46	True	AATAAA	-18
PB.11355.2	chr8	-	4266	1	incomplete-splice_match	AGO2	ENST00000220592.9	14581	19	108358	2840	5445	-2840	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-4732	False	TATAAA	-23
PB.5599.1	chr19	+	2717	5	novel_not_in_catalog	ZNF554	novel	2736	5	NA	NA	12	-3	any annotated donor/acceptor	FALSE	canonical	1	1967	junction_3	16710.287789263235	NA	1	NA	TRUE	NA	NA	NA	A	coding	537	1614	187	1800	15.0	0	True	NA	NA
PB.9355.9	chr5	+	2884	30	full-splice_match	CAST	ENST00000395812.6	4506	30	-6	1628	-6	0	multi-exon	FALSE	canonical	1	146156	junction_1	429349.5505040209	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	193	2445	15.0	-53	True	TTTAAA	-6
PB.9355.8	chr5	+	3299	31	novel_in_catalog	CAST	novel	864	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	195	2504	25.0	-55	True	AATAAA	-21
PB.11196.7	chr8	-	4610	1	novel_in_catalog	PEX2	novel	4317	4	NA	NA	110	-7615	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	81	246	78	323	65.0	-39	True	AATATA	-40
PB.6367.2	chr2	+	3765	5	novel_in_catalog	MAPRE3	novel	1892	7	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	141930	junction_1	245059.7214369387	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	2454	2924	35.0	-2	True	AATAAA	-11
PB.9355.1	chr5	+	4728	32	novel_in_catalog	CAST	novel	864	12	NA	NA	60	0	intron_retention	FALSE	canonical	1	146156	junction_1	446990.76069827116	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	290	2665	25.0	-917	False	ATTAAA	-18
PB.9355.3	chr5	+	2192	25	incomplete-splice_match	CAST	ENST00000510756.5	2310	30	-235	6368	-15	-2171	3prime_fragment	FALSE	canonical	1	146156	junction_1	315104.7670346677	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1956	236	2191	65.0	-9	True	NA	NA
PB.9355.2	chr5	+	3556	31	novel_in_catalog	CAST	novel	864	12	NA	NA	-49	23	intron_retention	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	270	2579	65.0	-897	False	TATAAA	-18
PB.9355.5	chr5	+	3193	32	novel_in_catalog	CAST	novel	864	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	146156	junction_1	446990.76069827116	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	201	2576	30.0	-61	True	AATAAA	-37
PB.9355.4	chr5	+	4464	31	novel_not_in_catalog	CAST	novel	864	12	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_1	400216.48078298266	NA	5	1	TRUE	NA	NA	NA	C	coding	686	2061	341	2401	25.0	-63	True	ATTAAA	-18
PB.9355.7	chr5	+	2811	31	novel_in_catalog	CAST	novel	864	12	NA	NA	-5	34	combination_of_known_junctions	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	192	2501	75.0	-52	True	GATAAA	-19
PB.9355.6	chr5	+	3368	32	novel_in_catalog	CAST	novel	864	12	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	146156	junction_1	446990.76069827116	NA	3	1	TRUE	NA	NA	NA	C	coding	791	2376	198	2573	25.0	-58	True	AATAAA	-21
PB.6852.1	chr2	-	2582	5	full-splice_match	ATP5MC3	ENST00000284727.8	5484	5	2898	4	1	-4	multi-exon	FALSE	canonical	1	4231677	junction_4	941585.7157548112	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	128	556	15.0	-1	True	AATAAA	-14
PB.11656.4	chr9	+	3234	18	full-splice_match	FAM120A	ENST00000277165.10	5118	18	517	1367	-145	-25	multi-exon	FALSE	canonical	1	7977	junction_6	235732.21624590817	NA	6	2	TRUE	NA	NA	NA	C	coding	975	2928	107	3034	80.0	-1451	False	TTTAAA	-43
PB.12009.1	chrX	-	2744	1	antisense	novelGene_PDK3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	103	312	434	745	100.0	NA	False	NA	NA
PB.11656.7	chr9	+	3662	18	full-splice_match	FAM120A	ENST00000277165.10	5118	18	204	1252	35	90	multi-exon	FALSE	canonical	1	7977	junction_6	235732.21624590817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1045	3138	210	3347	55.0	4	True	TTTAAA	-40
PB.10408.9	chr7	+	6366	8	novel_in_catalog	TMEM106B	novel	2126	8	NA	NA	0	4173	combination_of_known_junctions	FALSE	canonical	1	22861	junction_1	174489.34164291984	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	255	1079	15.0	2	True	AATAAA	-17
PB.10889.2	chr7	+	3641	16	full-splice_match	AGK	ENST00000355413.8	3849	16	205	3	-1	-3	multi-exon	FALSE	canonical	1	45669	junction_1	76942.89996256243	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	56	1324	20.0	-16	True	TATAAA	-14
PB.10889.3	chr7	+	2229	16	full-splice_match	AGK	ENST00000649286.1	2295	16	-2	68	1	12	multi-exon	FALSE	canonical	1	45669	junction_1	76942.89996256243	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	42	1310	15.0	-2	True	NA	NA
PB.10889.4	chr7	+	2793	16	full-splice_match	AGK	ENST00000649286.1	2295	16	0	-498	0	0	multi-exon	FALSE	canonical	1	45669	junction_1	76942.89996256243	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	40	1308	15.0	0	True	NA	NA
PB.10889.5	chr7	+	2652	16	full-splice_match	AGK	ENST00000649286.1	2295	16	0	-357	0	37	multi-exon	FALSE	canonical	1	45669	junction_1	76942.89996256243	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	40	1308	25.0	0	True	NA	NA
PB.10889.6	chr7	+	2528	16	full-splice_match	AGK	ENST00000649286.1	2295	16	0	-233	0	47	multi-exon	FALSE	canonical	1	45669	junction_1	76942.89996256243	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	40	1308	15.0	0	True	NA	NA
PB.10889.7	chr7	+	2412	15	novel_in_catalog	AGK	novel	3849	16	NA	NA	0	46	combination_of_known_junctions	FALSE	canonical	1	1276	junction_1	79772.33823036528	NA	1	1	TRUE	NA	NA	NA	C	coding	330	993	201	1193	15.0	0	True	NA	NA
PB.10889.8	chr7	+	2241	15	novel_in_catalog	AGK	novel	3849	16	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	1	4582	junction_2	85597.40319647314	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	270	1262	45.0	6	True	NA	NA
PB.10889.9	chr7	+	2753	1	novel_in_catalog	AGK	novel	3849	16	NA	NA	6	-40018	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	15	True	NA	NA
PB.1132.17	chr1	-	4988	35	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	-10	710	any annotated donor/acceptor	FALSE	canonical	1	2758	junction_2	63269.51737814854	NA	1	NA	TRUE	NA	NA	NA	C	coding	1368	4107	104	4210	95.0	-11	True	NA	NA
PB.1132.11	chr1	-	5291	34	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	-14	711	intron_retention	FALSE	canonical	1	133931	junction_17	47641.43748435554	NA	1	NA	TRUE	NA	NA	NA	C	coding	1358	4077	132	4208	100.0	23	False	NA	NA
PB.8733.3	chr4	+	5359	7	novel_not_in_catalog	KLF3	novel	5122	6	NA	NA	-162	-4	any annotated donor/acceptor	FALSE	canonical	1	7469	junction_4	137237.6096637588	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	468	1169	35.0	-3521	False	AATAAA	-14
PB.8118.6	chr3	+	2238	19	novel_not_in_catalog	APEH	novel	3220	22	NA	NA	-9	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	373677.0680237677	NA	4	1	TRUE	NA	NA	NA	C	coding	675	2028	52	2079	10.0	-16	True	AATAAA	-11
PB.8547.11	chr3	-	2042	6	novel_not_in_catalog	LAMP3	novel	3375	6	NA	NA	121	-8213	any annotated donor/acceptor	FALSE	canonical	1	17045	junction_1	54619.468897454506	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	107	1363	10.0	10	True	AATAAA	-28
PB.8547.10	chr3	-	3840	6	novel_not_in_catalog	LAMP3	novel	3375	6	NA	NA	121	-6415	any annotated donor/acceptor	FALSE	canonical	1	17045	junction_1	54619.468897454506	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	107	1363	65.0	10	True	NA	NA
PB.4246.9	chr16	+	2117	10	incomplete-splice_match	CLEC16A	ENST00000409552.4	3365	21	-17	122816	-17	-20948	3prime_fragment	FALSE	canonical	1	122430	junction_7	15237.978035726523	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	155	1567	90.0	0	True	NA	NA
PB.4246.8	chr16	+	3335	22	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-17	9700	combination_of_known_junctions	FALSE	canonical	1	60290	junction_10	30926.562370980835	NA	1	NA	TRUE	NA	NA	NA	C	coding	940	2823	155	2977	15.0	0	True	NA	NA
PB.4246.7	chr16	+	4105	3	incomplete-splice_match	CLEC16A	ENST00000409552.4	3365	21	-17	160591	-17	-58723	3prime_fragment	FALSE	canonical	1	133850	junction_2	12017.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	155	766	80.0	0	True	NA	NA
PB.4246.6	chr16	+	6508	23	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-17	-245	combination_of_known_junctions	FALSE	canonical	1	69746	junction_22	32396.705787569877	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	155	3262	25.0	0	True	AATAAA	-31
PB.4246.5	chr16	+	6781	23	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-17	-20	combination_of_known_junctions	FALSE	canonical	1	60290	junction_10	34212.61136766735	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	155	3310	70.0	0	True	AATGAA	-33
PB.4246.4	chr16	+	2990	21	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-19	-442	combination_of_known_junctions	FALSE	canonical	1	60290	junction_10	31246.125774245997	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	157	2925	5.0	-2	True	AATAAA	-19
PB.4246.3	chr16	+	6763	23	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-24	3	combination_of_known_junctions	FALSE	canonical	1	69746	junction_22	32396.705787569877	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	162	3269	25.0	-7	True	AATAAA	-18
PB.4246.2	chr16	+	2947	21	full-splice_match	CLEC16A	ENST00000409552.4	3365	21	-26	444	-26	-444	multi-exon	FALSE	canonical	1	78157	junction_10	28894.25106188946	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	164	2884	5.0	-9	True	AATAAA	-17
PB.4246.1	chr16	+	6567	23	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-28	-245	combination_of_known_junctions	FALSE	canonical	1	60290	junction_10	34212.61136766735	NA	4	NA	TRUE	NA	NA	NA	C	coding	1051	3156	166	3321	25.0	-11	True	AATAAA	-31
PB.6560.1	chr2	-	4812	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	1	72	-1	-72	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	194	844	50.0	11	True	AATAAA	-14
PB.4785.5	chr17	+	1679	10	full-splice_match	TTC19	ENST00000261647.9	3002	10	442	881	-2	496	multi-exon	FALSE	canonical	1	121249	junction_1	123743.10039256907	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	28	1170	60.0	-2	True	NA	NA
PB.4785.4	chr17	+	2431	10	full-splice_match	TTC19	ENST00000261647.9	3002	10	442	129	-2	-3	multi-exon	FALSE	canonical	1	121249	junction_1	123743.10039256907	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	28	1170	30.0	-2	True	AATAAA	-16
PB.4785.6	chr17	+	1806	10	full-splice_match	TTC19	ENST00000261647.9	3002	10	444	752	0	625	multi-exon	FALSE	canonical	1	121249	junction_1	123743.10039256907	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	26	1168	45.0	0	True	AATAAA	-27
PB.4785.1	chr17	+	2606	10	full-splice_match	TTC19	ENST00000475723.5	2591	10	-22	7	-4	-7	multi-exon	FALSE	canonical	1	36232	junction_2	160838.29945224914	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	528	1349	35.0	-840	False	AATAAA	-12
PB.4785.3	chr17	+	3153	9	incomplete-splice_match	TTC19	ENST00000261647.9	3002	10	391	129	-13	-3	intron_retention	FALSE	canonical	1	121249	junction_1	104357.898210617	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	79	1080	30.0	0	True	AATAAA	-16
PB.4785.2	chr17	+	2588	11	novel_in_catalog	TTC19	novel	3002	10	NA	NA	-29	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	189665.37779260083	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	95	826	35.0	2	True	AATAAA	-12
PB.472.15	chr1	-	3289	11	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	1028	junction_8	70555.12831368105	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	315	1808	30.0	-1	True	AATAAA	-16
PB.1813.1	chr11	+	2774	3	novel_not_in_catalog	SBF2-AS1	novel	2709	3	NA	NA	-50	0	intron_retention	FALSE	non_canonical	0	0	junction_2	14813.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-1093	False	NA	NA
PB.866.12	chr1	-	2412	12	novel_not_in_catalog	ARHGAP30	novel	4857	10	NA	NA	2	8	any annotated donor/acceptor	FALSE	canonical	1	51429	junction_1	91570.9419028504	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	345	2411	65.0	1	True	NA	NA
PB.10234.1	chr6	-	2493	2	incomplete-splice_match	LINC02539	ENST00000645996.1	641	3	9	52273	9	-52273	3prime_fragment	FALSE	canonical	1	3847	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	1792	False	NA	NA
PB.10338.49	chr6	-	5588	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-10	123	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	125100.06498135858	NA	23	1	TRUE	NA	NA	NA	C	coding	557	1674	148	1821	5.0	-3	True	ATTAAA	-21
PB.10397.2	chr7	+	2069	6	novel_not_in_catalog	C7orf26	novel	2182	6	NA	NA	4	0	intron_retention	FALSE	canonical	1	17163	junction_1	138514.24435833306	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	514	1506	30.0	0	True	AATAAA	-15
PB.10397.3	chr7	+	2169	6	full-splice_match	C7orf26	ENST00000344417.9	2182	6	12	1	12	1	multi-exon	FALSE	canonical	1	176520	junction_5	88346.50174987123	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	256	1605	30.0	8	True	AATAAA	-16
PB.10397.1	chr7	+	2300	7	novel_not_in_catalog	C7orf26	novel	2182	6	NA	NA	3	1	intron_retention	FALSE	canonical	1	5295	junction_4	154669.21167599005	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	265	1482	30.0	-1	True	AATAAA	-16
PB.2894.10	chr12	+	2322	8	incomplete-splice_match	ATP2A2	ENST00000548169.2	2951	16	47567	-697	-3640	-8	5prime_fragment	FALSE	canonical	1	1848686	junction_2	512091.3706955597	NA	0	NA	TRUE	NA	NA	NA	B	coding	468	1407	68	1474	35.0	-7885	False	AATAAA	-20
PB.10397.4	chr7	+	2211	7	novel_in_catalog	C7orf26	novel	2182	6	NA	NA	30	0	intron_retention	FALSE	canonical	1	25328	junction_5	146460.22606572142	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	238	2007	30.0	0	True	AATAAA	-15
PB.2894.13	chr12	+	1772	6	incomplete-splice_match	ATP2A2	ENST00000548169.2	2951	16	50287	-697	-920	-8	5prime_fragment	FALSE	canonical	1	1858391	junction_2	484041.5979063783	NA	0	NA	TRUE	NA	NA	NA	B	coding	287	864	61	924	35.0	-5165	False	AATAAA	-20
PB.5390.1	chr18	+	4274	6	full-splice_match	VAPA	ENST00000400000.6	6815	6	239	2302	178	-2302	multi-exon	FALSE	canonical	1	447822	junction_1	616127.1000783524	NA	3	NA	TRUE	NA	NA	NA	C	coding	242	729	38	766	60.0	-9	True	AATAAA	-40
PB.5390.2	chr18	+	6523	6	full-splice_match	VAPA	ENST00000400000.6	6815	6	-8	300	-8	-300	multi-exon	FALSE	canonical	1	447822	junction_1	616127.1000783524	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	285	1013	100.0	-35	True	AATACA	-44
PB.5390.3	chr18	+	1274	6	full-splice_match	VAPA	ENST00000400000.6	6815	6	23	5518	23	26	multi-exon	FALSE	canonical	1	447822	junction_1	616127.1000783524	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	254	982	45.0	-4	True	AATAAA	-25
PB.5390.4	chr18	+	3308	6	full-splice_match	VAPA	ENST00000400000.6	6815	6	219	3288	158	2256	multi-exon	FALSE	canonical	1	447822	junction_1	616127.1000783524	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	58	786	25.0	-29	True	ATTAAA	-19
PB.4512.1	chr16	+	4151	4	novel_in_catalog	HAS3	novel	2170	4	NA	NA	-32	-8	combination_of_known_junctions	FALSE	canonical	1	18371	junction_1	45002.54665633441	NA	1	NA	TRUE	NA	NA	NA	A	coding	553	1662	96	1757	25.0	0	True	AATAAA	-22
PB.5390.6	chr18	+	1398	6	full-splice_match	VAPA	ENST00000400000.6	6815	6	220	5197	159	347	multi-exon	FALSE	canonical	1	447822	junction_1	616127.1000783524	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	57	785	5.0	-28	True	AATAAA	-24
PB.5390.7	chr18	+	3614	7	full-splice_match	VAPA	ENST00000340541.4	1227	7	-11	-2376	-1	2257	multi-exon	FALSE	canonical	1	101896	junction_4	637433.7383299799	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	228	1091	25.0	22	True	ATTAAA	-20
PB.6236.1	chr19	+	8161	3	full-splice_match	ZNF460	ENST00000360338.3	3350	3	-26	-4785	-26	4785	multi-exon	FALSE	canonical	1	84558	junction_1	29953.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	562	1689	349	2037	95.0	-26	True	NA	NA
PB.6236.2	chr19	+	3105	3	full-splice_match	ZNF460	ENST00000360338.3	3350	3	-3	248	-3	-248	multi-exon	FALSE	canonical	1	84558	junction_1	29953.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	562	1689	326	2014	35.0	-3	True	AATAAA	-31
PB.6236.3	chr19	+	3527	3	full-splice_match	ZNF460	ENST00000360338.3	3350	3	-5	-172	-5	172	multi-exon	FALSE	canonical	1	84558	junction_1	29953.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	328	2016	30.0	-5	True	NA	NA
PB.6236.4	chr19	+	3853	3	full-splice_match	ZNF460	ENST00000360338.3	3350	3	0	-503	0	503	multi-exon	FALSE	canonical	1	84558	junction_1	29953.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	323	2011	25.0	0	True	NA	NA
PB.6236.5	chr19	+	3256	3	full-splice_match	ZNF460	ENST00000360338.3	3350	3	1	93	1	-93	multi-exon	FALSE	canonical	1	84558	junction_1	29953.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	322	2010	10.0	1	True	NA	NA
PB.10895.1	chr7	-	2398	7	incomplete-splice_match	TCAF1	ENST00000392900.3	2513	8	22384	-856	19996	724	5prime_fragment	FALSE	canonical	1	1915	junction_2	625.2539261949678	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	17	1237	75.0	NA	False	NA	NA
PB.11538.6	chr9	+	2619	20	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	140556.12883314467	NA	18	3	TRUE	NA	NA	NA	C	coding	637	1914	363	2276	10.0	-28	True	AATAAA	-15
PB.8252.15	chr3	-	2909	3	incomplete-splice_match	RIOX2	ENST00000394198.6	2341	10	11	14980	11	-5324	3prime_fragment	FALSE	canonical	1	87743	junction_2	99654.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	100	699	100.0	-25	True	NA	NA
PB.834.2	chr1	-	1626	9	novel_not_in_catalog	SH2D2A	novel	1599	9	NA	NA	29	7	any annotated donor/acceptor	FALSE	canonical	1	4323	junction_8	27888.31202734176	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	98	1285	5.0	42	False	AATAAA	-37
PB.3457.38	chr14	+	4276	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	252824	junction_1	350066.2357271383	NA	0	NA	TRUE	NA	NA	NA	C	coding	1329	3990	136	4125	75.0	8	True	NA	NA
PB.3457.39	chr14	+	3430	35	incomplete-splice_match	KTN1	ENST00000395314.7	4618	44	-67	13823	-4	-1941	3prime_fragment	FALSE	canonical	1	252824	junction_1	273877.5307187414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3294	136	3429	65.0	8	True	NA	NA
PB.3457.36	chr14	+	4513	42	full-splice_match	KTN1	ENST00000438792.6	4449	42	-67	3	-6	0	multi-exon	FALSE	canonical	1	252824	junction_1	340822.79097600124	NA	1	NA	TRUE	NA	NA	NA	C	coding	1300	3903	138	4040	30.0	6	True	AATAAA	-17
PB.3457.37	chr14	+	4456	43	novel_not_in_catalog	KTN1	novel	291	2	NA	NA	-4	137	any annotated donor/acceptor	FALSE	canonical	1	1766	junction_1	403686.8252240241	NA	4	1	TRUE	NA	NA	NA	C	coding	1300	3903	260	4162	50.0	8	True	AATAAA	-10
PB.3457.34	chr14	+	3767	39	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-68	8716	-7	1559	3prime_fragment	FALSE	canonical	1	252824	junction_1	353201.19852032873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1209	3627	139	3765	60.0	5	True	AATGAA	-9
PB.3457.35	chr14	+	3470	35	novel_in_catalog	KTN1	novel	291	2	NA	NA	-7	-1941	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	330679.94149126834	NA	2	NA	TRUE	NA	NA	NA	C	coding	1069	3207	263	3469	65.0	5	True	NA	NA
PB.3457.32	chr14	+	4604	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	252824	junction_1	350066.2357271383	NA	1	NA	TRUE	NA	NA	NA	C	coding	1329	3990	142	4131	30.0	2	True	AATAAA	-17
PB.3457.33	chr14	+	2339	19	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-69	37579	-8	-5875	3prime_fragment	FALSE	canonical	1	252824	junction_1	297375.7908574427	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2199	140	2338	45.0	4	True	NA	NA
PB.3457.30	chr14	+	3528	33	novel_not_in_catalog	KTN1	novel	291	2	NA	NA	-12	-2	any annotated donor/acceptor	FALSE	canonical	1	444	junction_32	320319.4698950894	NA	3	1	TRUE	NA	NA	NA	C	coding	1035	3108	144	3251	5.0	0	True	NA	NA
PB.3457.31	chr14	+	3351	34	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-73	13823	-12	-1941	3prime_fragment	FALSE	canonical	1	252824	junction_1	261330.057958381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1069	3207	144	3350	65.0	0	True	NA	NA
PB.9947.5	chr6	+	1719	4	novel_in_catalog	RPL10A	novel	716	6	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	2544894	junction_3	1950889.7887513335	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	890	1222	5.0	2	True	AATAAA	-16
PB.11270.12	chr8	-	4548	12	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-39	-7	intron_retention	FALSE	canonical	1	2937	junction_11	191031.68678083376	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	636	3059	5.0	-7	True	AATAAA	-17
PB.9947.2	chr6	+	715	6	full-splice_match	RPL10A	ENST00000322203.6	716	6	-5	6	-5	-6	multi-exon	FALSE	canonical	1	1092779	junction_4	2507369.7569982773	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	33	686	5.0	2	True	AATAAA	-14
PB.10138.1	chr6	-	2431	3	full-splice_match	CD24	ENST00000619133.4	2513	3	80	2	-58	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-20
PB.9947.3	chr6	+	2378	1	genic	RPL10A	novel	NA	NA	NA	NA	-5	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	1322	1654	5.0	2	True	AATAAA	-15
PB.2662.13	chr12	-	2513	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1078728	junction_9	204795.58059003588	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	951	2405	5.0	-1	True	AATAAA	-14
PB.2662.12	chr12	-	2984	7	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	23707	junction_6	557093.3201344926	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	693	1574	5.0	-1	True	AATAAA	-14
PB.2662.11	chr12	-	2854	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1078728	junction_9	204439.6467392978	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	32	1444	5.0	-1	True	AATAAA	-14
PB.2662.10	chr12	-	3093	9	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1078728	junction_8	210970.79769055123	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	32	1444	5.0	-1	True	AATAAA	-14
PB.4799.2	chr17	-	1729	8	full-splice_match	FLCN	ENST00000389169.9	1692	8	-36	-1	7	1	multi-exon	FALSE	canonical	1	187738	junction_5	48697.020635512294	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	492	1520	15.0	-11	True	AATAAA	-15
PB.4799.1	chr17	-	3692	14	full-splice_match	FLCN	ENST00000285071.8	3638	14	-50	-4	-1	4	multi-exon	FALSE	canonical	1	183443	junction_6	42406.88683575572	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	506	2245	20.0	-25	True	AATAAA	-21
PB.2662.19	chr12	-	2143	11	full-splice_match	PMEL	ENST00000449260.6	2127	11	-17	1	3	0	multi-exon	FALSE	canonical	1	73403	junction_2	424253.73166094837	NA	3	1	TRUE	NA	NA	NA	C	coding	668	2007	29	2035	5.0	2	True	AATAAA	-14
PB.2662.18	chr12	-	1997	12	novel_in_catalog	PMEL	novel	2127	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	207093	junction_6	372529.0268938951	NA	5	2	TRUE	NA	NA	NA	C	coding	619	1860	30	1889	5.0	1	True	AATAAA	-14
PB.3682.15	chr14	+	3407	16	full-splice_match	MARK3	ENST00000303622.13	3283	16	-128	4	2	0	multi-exon	FALSE	canonical	1	381516	junction_2	135653.38971052496	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	618	2807	25.0	-2	True	ATTAAA	-19
PB.11637.20	chr9	+	4198	5	novel_not_in_catalog	SPIN1	novel	4484	6	NA	NA	-346	-2	any annotated donor/acceptor	FALSE	canonical	1	1444	junction_1	274719.179494716	NA	19	NA	TRUE	NA	NA	NA	C	coding	131	396	388	783	30.0	-205	False	AATAAA	-13
PB.11369.3	chr8	+	4049	3	full-splice_match	ZNF696	ENST00000330143.7	2795	3	169	-1423	136	1423	multi-exon	FALSE	canonical	1	41688	junction_1	2188.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	241	1365	30.0	141	False	NA	NA
PB.9884.1	chr6	+	3146	2	novel_not_in_catalog	AL671762.1	novel	1338	4	NA	NA	-6625	-9464	any annotated donor/acceptor	FALSE	canonical	1	6923	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	641	1926	842	2767	20.0	-7963	False	AATAAA	-14
PB.10003.2	chr6	+	3136	10	novel_not_in_catalog	TJAP1	novel	2778	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3311	junction_9	84068.25894341918	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	1314	2438	25.0	-3	True	AATAAA	-15
PB.10003.3	chr6	+	2733	11	novel_in_catalog	TJAP1	novel	2778	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	34987	junction_3	88184.90866179994	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	392	2035	25.0	-2	True	AATAAA	-15
PB.10003.1	chr6	+	2711	10	novel_in_catalog	TJAP1	novel	2778	11	NA	NA	-3	0	intron_retention	FALSE	canonical	1	17002	junction_4	85410.85303402606	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	493	2013	25.0	-4	True	AATAAA	-15
PB.10003.6	chr6	+	2513	9	full-splice_match	TJAP1	ENST00000436109.6	2572	9	55	4	5	-1	multi-exon	FALSE	canonical	1	13065	junction_1	90275.09461640015	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	173	1816	25.0	8	True	AATAAA	-14
PB.10003.4	chr6	+	2673	10	novel_in_catalog	TJAP1	novel	2778	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	100853	junction_3	66219.77588993774	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	330	1973	25.0	0	True	AATAAA	-17
PB.10003.5	chr6	+	2612	10	novel_in_catalog	TJAP1	novel	2778	11	NA	NA	1	-2	intron_retention	FALSE	canonical	1	15531	junction_1	84646.11921332568	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	273	1916	20.0	4	True	AATAAA	-13
PB.1240.35	chr1	-	2914	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	14	56	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	1904400.8788093852	NA	4	1	TRUE	NA	NA	NA	C	coding	825	2478	121	2598	20.0	-9	True	AGTAAA	-13
PB.11694.5	chr9	+	3752	20	full-splice_match	RNF20	ENST00000389120.7	3940	20	2	186	2	-186	multi-exon	FALSE	canonical	1	213414	junction_1	75333.80389430495	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	89	3016	30.0	-12	True	AATAAA	-26
PB.1088.11	chr1	+	2367	11	incomplete-splice_match	CR2	ENST00000367058.7	4063	19	17192	15	407	-15	5prime_fragment	FALSE	canonical	1	105915	junction_1	21335.77858644957	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	57	1610	60.0	NA	False	AATAAA	-11
PB.9308.13	chr5	-	2783	22	incomplete-splice_match	AP3B1	ENST00000255194.10	5838	27	53	88785	-10	-329	3prime_fragment	FALSE	canonical	1	267957	junction_19	85046.67204381304	NA	1	NA	TRUE	NA	NA	NA	C	coding	863	2592	124	2715	30.0	-11	True	ATTAAA	-19
PB.9308.12	chr5	-	3289	23	novel_not_in_catalog	AP3B1	novel	5838	27	NA	NA	-25	4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	135764.61294218354	NA	3	NA	TRUE	NA	NA	NA	C	coding	661	1986	139	2124	15.0	-26	True	ATTAAA	-30
PB.9308.11	chr5	-	3269	23	novel_in_catalog	AP3B1	novel	5838	27	NA	NA	-5	402	combination_of_known_junctions	FALSE	canonical	1	8336	junction_1	113534.51643982639	NA	1	NA	TRUE	NA	NA	NA	C	coding	871	2616	119	2734	30.0	-6	True	NA	NA
PB.1339.29	chr10	-	2127	9	novel_in_catalog	ABI1	novel	3362	10	NA	NA	16	691	combination_of_known_junctions	FALSE	canonical	1	282716	junction_2	198609.80029491874	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	93	1436	15.0	-3	True	TATAAA	-32
PB.9308.15	chr5	-	2348	19	incomplete-splice_match	AP3B1	ENST00000255194.10	5838	27	59	113245	-4	7952	3prime_fragment	FALSE	canonical	1	267957	junction_16	81723.69626333208	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2229	118	2346	60.0	-5	True	AAAACA	-23
PB.9308.14	chr5	-	2546	20	incomplete-splice_match	AP3B1	ENST00000255194.10	5838	27	28	109681	28	11516	3prime_fragment	FALSE	canonical	1	267957	junction_17	79850.07791131586	NA	1	NA	TRUE	NA	NA	NA	C	coding	799	2397	149	2545	35.0	-36	True	NA	NA
PB.1339.22	chr10	-	2881	9	novel_in_catalog	ABI1	novel	3362	10	NA	NA	-18	-323	combination_of_known_junctions	FALSE	canonical	1	282716	junction_2	198609.80029491874	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	186	1529	15.0	-65	False	ATTAAA	-19
PB.1339.23	chr10	-	2634	8	novel_in_catalog	ABI1	novel	3362	10	NA	NA	-5	-323	combination_of_known_junctions	FALSE	canonical	1	149523	junction_2	222125.107781858	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	116	1282	15.0	5	True	ATTAAA	-19
PB.1339.20	chr10	-	3033	11	full-splice_match	ABI1	ENST00000359188.8	3492	11	-27	486	9	-184	multi-exon	FALSE	canonical	1	141762	junction_8	288084.1634703477	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	100	1542	40.0	-10	True	ATTAAA	-17
PB.1339.21	chr10	-	2873	10	full-splice_match	ABI1	ENST00000376139.6	3516	10	18	625	-18	-323	multi-exon	FALSE	canonical	1	215007	junction_3	227564.63013541157	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	91	1521	15.0	-1	True	ATTAAA	-19
PB.1339.26	chr10	-	2456	9	full-splice_match	ABI1	ENST00000376166.5	3441	9	-72	1057	-28	-755	multi-exon	FALSE	canonical	1	153831	junction_3	236472.47235193016	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	196	1536	45.0	-75	False	TTTAAA	-16
PB.1339.27	chr10	-	2210	8	novel_in_catalog	ABI1	novel	3362	10	NA	NA	-1	-756	combination_of_known_junctions	FALSE	canonical	1	149523	junction_2	222125.107781858	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	125	1291	45.0	-4	True	TTTAAA	-15
PB.1339.24	chr10	-	2715	9	full-splice_match	ABI1	ENST00000536334.5	3380	9	34	631	-23	-332	multi-exon	FALSE	canonical	1	141762	junction_6	296752.76420405926	NA	10	NA	TRUE	NA	NA	NA	C	coding	393	1182	191	1372	10.0	-70	False	ATTAAA	-10
PB.1339.25	chr10	-	2578	9	full-splice_match	ABI1	ENST00000376166.5	3441	9	33	830	-18	-528	multi-exon	FALSE	canonical	1	153831	junction_3	236472.47235193016	NA	2	NA	TRUE	NA	NA	NA	C	coding	446	1341	91	1431	35.0	-1	True	AATAAA	-9
PB.1267.4	chr10	-	6483	4	novel_not_in_catalog	IDI1	novel	3370	5	NA	NA	-3	-118	intron_retention	TRUE	non_canonical	0	0	junction_3	505614.80827822105	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-21
PB.9425.5	chr5	+	2646	9	full-splice_match	PRRC1	ENST00000296666.12	4699	9	22	2031	-9	602	multi-exon	FALSE	canonical	1	274967	junction_5	81106.11879112065	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	167	1504	30.0	-9	True	AATAAA	-20
PB.67.5	chr1	-	6281	13	full-splice_match	RERE	ENST00000476556.5	4598	13	4	-1687	4	0	multi-exon	TRUE	canonical	1	52089	junction_12	157880.670479915	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	562	3600	10.0	1236	False	AATAAA	-16
PB.9714.4	chr6	-	2265	3	novel_not_in_catalog	LY86-AS1	novel	1941	8	NA	NA	-103	58542	any annotated donor/acceptor	FALSE	canonical	1	33050	junction_2	3430.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	114	345	1494	1838	20.0	5656	False	NA	NA
PB.9714.5	chr6	-	2299	2	novel_not_in_catalog	LY86-AS1	novel	1941	8	NA	NA	-209	58542	any annotated donor/acceptor	FALSE	canonical	1	5735	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	114	345	1528	1872	20.0	-1	True	NA	NA
PB.9714.1	chr6	-	3147	3	novel_not_in_catalog	LY86-AS1	novel	1941	8	NA	NA	-209	59318	any annotated donor/acceptor	FALSE	canonical	1	33050	junction_2	3430.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	114	345	1600	1944	95.0	-1	True	NA	NA
PB.9714.2	chr6	-	2785	3	novel_not_in_catalog	LY86-AS1	novel	1941	8	NA	NA	-209	58956	any annotated donor/acceptor	FALSE	canonical	1	33050	junction_2	3430.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	114	345	1600	1944	75.0	-1	True	NA	NA
PB.9714.3	chr6	-	2345	3	novel_not_in_catalog	LY86-AS1	novel	1941	8	NA	NA	-102	58543	any annotated donor/acceptor	FALSE	canonical	1	6944	junction_2	16483.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	114	345	1573	1917	20.0	5657	False	NA	NA
PB.10887.2	chr7	+	2445	4	novel_not_in_catalog	NDUFB2	novel	544	6	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1676226.8041851218	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	ATTAAA	-25
PB.10887.1	chr7	+	488	4	full-splice_match	NDUFB2	ENST00000247866.8	504	4	14	2	-2	0	multi-exon	FALSE	canonical	1	2174995	junction_3	847366.5853912081	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	60	377	20.0	-22	True	ATTAAA	-34
PB.3171.5	chr13	+	4184	2	novel_not_in_catalog	TRIM13	novel	692	4	NA	NA	10	-11036	intron_retention	TRUE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	22	True	NA	NA
PB.3171.4	chr13	+	1501	3	full-splice_match	TRIM13	ENST00000457662.2	1489	3	-6	-6	-6	6	multi-exon	FALSE	canonical	1	88635	junction_1	89556.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	268	1491	20.0	6	True	TATAAA	-20
PB.3171.3	chr13	+	2653	3	full-splice_match	TRIM13	ENST00000457662.2	1489	3	-19	-1145	3	-18	multi-exon	FALSE	canonical	1	88635	junction_1	89556.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	281	1504	100.0	-7	True	NA	NA
PB.3171.2	chr13	+	1433	3	full-splice_match	TRIM13	ENST00000420995.6	2607	3	11	1163	-2	0	multi-exon	FALSE	canonical	1	90837	junction_1	88455.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	206	1429	20.0	-17	True	TATAAA	-14
PB.3171.1	chr13	+	2598	3	full-splice_match	TRIM13	ENST00000420995.6	2607	3	-9	18	-9	-18	multi-exon	FALSE	canonical	1	90837	junction_1	88455.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	226	1449	100.0	-37	False	NA	NA
PB.2890.18	chr12	-	2270	15	full-splice_match	GIT2	ENST00000547815.5	2989	15	-23	742	-15	-2	multi-exon	FALSE	canonical	1	107959	junction_1	108026.18179187215	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	96	1511	10.0	3	True	AATAAA	-15
PB.2890.19	chr12	-	2276	15	novel_in_catalog	GIT2	novel	5466	20	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	8223	junction_1	124266.7334335497	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	147	1517	10.0	-3	True	AATAAA	-15
PB.11196.5	chr8	-	2028	4	full-splice_match	PEX2	ENST00000357039.8	4317	4	-374	2663	-333	13	multi-exon	FALSE	canonical	1	414084	junction_3	42183.25592775724	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	771	1688	20.0	-371	False	GATAAA	-18
PB.1732.1	chr11	+	3424	10	full-splice_match	RIC8A	ENST00000526104.5	3703	10	274	5	274	-5	multi-exon	FALSE	canonical	1	619342	junction_1	136218.6456594102	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	1071	2666	50.0	-8284	False	AATAAA	-15
PB.2890.10	chr12	-	2732	19	full-splice_match	GIT2	ENST00000361006.9	5444	19	-76	2788	-7	23	multi-exon	FALSE	canonical	1	62189	junction_4	111103.28214836359	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	157	2346	65.0	0	True	TATAAA	-41
PB.2890.11	chr12	-	2659	19	novel_in_catalog	GIT2	novel	5466	20	NA	NA	1	23	combination_of_known_junctions	FALSE	canonical	1	45557	junction_6	121629.55673400986	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	144	2273	65.0	0	True	TATAAA	-41
PB.2890.12	chr12	-	2583	18	novel_in_catalog	GIT2	novel	5466	20	NA	NA	8	23	combination_of_known_junctions	FALSE	canonical	1	45557	junction_5	124564.49895499936	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	158	2197	65.0	-1	True	TATAAA	-41
PB.2890.13	chr12	-	2320	17	novel_in_catalog	GIT2	novel	5466	20	NA	NA	1	23	no_combination_of_known_junctions	FALSE	canonical	1	8129	junction_4	119149.14919858259	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	144	1934	65.0	0	True	TATAAA	-41
PB.2890.14	chr12	-	2765	20	novel_in_catalog	GIT2	novel	5466	20	NA	NA	-1	22	no_combination_of_known_junctions	FALSE	canonical	1	10983	junction_6	122462.02964838165	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	146	2380	65.0	-2	True	TATAAA	-40
PB.2890.15	chr12	-	2411	20	full-splice_match	GIT2	ENST00000355312.7	5466	20	-149	3204	0	-18	multi-exon	FALSE	canonical	1	113740	junction_5	109094.67351099646	NA	1	1	TRUE	NA	NA	NA	C	coding	754	2262	150	2411	60.0	-6	True	NA	NA
PB.2890.16	chr12	-	4639	14	full-splice_match	GIT2	ENST00000551455.5	2014	14	6	-2631	1	-1	multi-exon	FALSE	canonical	1	178742	junction_13	92808.05670584204	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	144	1547	5.0	0	True	AATAAA	-16
PB.2890.17	chr12	-	2370	15	novel_in_catalog	GIT2	novel	5466	20	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	1	4005	junction_14	131838.9000282472	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	454	1611	10.0	1	True	AATAAA	-15
PB.11297.1	chr8	-	1506	13	full-splice_match	EIF3E	ENST00000220849.9	1543	13	36	1	-10	-1	multi-exon	FALSE	canonical	1	2100	junction_2	1361742.386791773	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	28	1365	10.0	-13	False	AATAAA	-14
PB.11297.2	chr8	-	1377	13	full-splice_match	EIF3E	ENST00000220849.9	1543	13	32	134	-14	-12	multi-exon	FALSE	canonical	1	2100	junction_2	1361742.386791773	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	32	1369	80.0	-17	False	NA	NA
PB.938.1	chr1	-	3524	3	full-splice_match	TNFSF4	ENST00000367718.5	3429	3	-91	-4	75	4	multi-exon	FALSE	canonical	1	31885	junction_2	15741.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	337	738	15.0	-8	True	AATAAA	-20
PB.4301.1	chr16	-	2543	6	incomplete-splice_match	RRN3P1	ENST00000551681.1	1151	8	-46	7	-46	-7	intron_retention	FALSE	canonical	1	14221	junction_5	29099.905539365587	NA	3	NA	TRUE	NA	NA	NA	B	coding	106	321	1706	2026	35.0	-62	False	AATAAA	-13
PB.10140.1	chr6	-	6217	4	full-splice_match	BEND3	ENST00000369042.5	6200	4	-30	13	-30	-8	multi-exon	FALSE	canonical	1	12100	junction_3	10738.709512785976	NA	1	NA	TRUE	NA	NA	NA	A	coding	828	2487	222	2708	60.0	898	False	TATAAA	-8
PB.11702.9	chr9	+	7453	11	full-splice_match	FKTN	ENST00000602661.5	2576	11	2	-4879	0	-1	multi-exon	FALSE	canonical	1	14531	junction_1	25992.808189959007	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	215	1600	25.0	0	True	AATAAA	-18
PB.4301.2	chr16	-	2306	6	incomplete-splice_match	RRN3P1	ENST00000551681.1	1151	8	-51	249	-51	-249	intron_retention	FALSE	canonical	1	14221	junction_5	29099.905539365587	NA	1	NA	TRUE	NA	NA	NA	B	coding	106	321	1711	2031	15.0	-67	False	ATTAAA	-11
PB.5337.1	chr17	-	4176	1	novel_in_catalog	CENPX	novel	702	4	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	382	1149	1579	2727	10.0	-2	True	AATAAA	-18
PB.1732.4	chr11	+	3573	9	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	201	-6	intron_retention	FALSE	canonical	1	619342	junction_1	138677.1778087512	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	1144	2580	45.0	0	True	AATAAA	-14
PB.2859.24	chr12	+	5837	34	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	1303	junction_27	116623.26715066082	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	25	2850	25.0	46	True	AATAAA	-11
PB.9069.8	chr4	+	3450	12	full-splice_match	GALNT7	ENST00000265000.8	4307	12	17	840	17	0	multi-exon	FALSE	canonical	1	227341	junction_6	66964.01459103808	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	67	2040	75.0	1	True	ATTAAA	-20
PB.2859.22	chr12	+	3125	30	incomplete-splice_match	WASHC4	ENST00000332180.9	5812	33	59	6349	1	-5	3prime_fragment	FALSE	canonical	1	241415	junction_12	52359.35725552457	NA	1	NA	TRUE	NA	NA	NA	C	coding	1032	3096	29	3124	80.0	42	True	NA	NA
PB.2859.23	chr12	+	3631	34	novel_not_in_catalog	WASHC4	novel	576	7	NA	NA	5	-19	any annotated donor/acceptor	FALSE	canonical	1	1265	junction_27	116397.22926722628	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	25	2859	75.0	46	True	NA	NA
PB.2859.20	chr12	+	3430	32	novel_in_catalog	WASHC4	novel	576	7	NA	NA	-9	-19	combination_of_known_junctions	FALSE	canonical	1	9974	junction_31	78295.29340214646	NA	2	1	TRUE	NA	NA	NA	C	coding	1130	3390	39	3428	75.0	32	True	NA	NA
PB.2859.21	chr12	+	4897	5	novel_in_catalog	WASHC4	novel	576	7	NA	NA	0	1553	intron_retention	FALSE	canonical	1	265720	junction_2	60539.51464694361	NA	0	NA	TRUE	NA	NA	NA	C	coding	95	288	30	317	80.0	41	True	NA	NA
PB.10765.4	chr7	+	4314	1	novel_in_catalog	LHFPL3	novel	1852	3	NA	NA	451538	-122203	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	99	300	1466	1765	75.0	4	True	NA	NA
PB.9069.7	chr4	+	2993	11	novel_in_catalog	GALNT7	novel	4307	12	NA	NA	13	0	no_combination_of_known_junctions	FALSE	canonical	1	3530	junction_1	117195.93827181043	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	279	1583	75.0	-435	False	ATTAAA	-20
PB.6910.71	chr2	-	2201	22	incomplete-splice_match	STAT1	ENST00000392322.7	2716	23	10	1457	10	-1352	3prime_fragment	FALSE	canonical	1	957747	junction_21	236469.63567174037	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	297	2201	35.0	1	True	NA	NA
PB.1732.6	chr11	+	2531	10	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	-25	-4	combination_of_known_junctions	FALSE	canonical	1	19540	junction_1	286240.6743278361	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	507	1772	45.0	-26	True	AATAAA	-16
PB.6910.73	chr2	-	1393	12	incomplete-splice_match	STAT1	ENST00000392322.7	2716	23	8	14080	8	10009	3prime_fragment	FALSE	canonical	1	957747	junction_11	279122.5714650693	NA	3	NA	TRUE	NA	NA	NA	C	coding	365	1095	299	1393	45.0	-1	True	NA	NA
PB.9069.6	chr4	+	4211	11	novel_in_catalog	GALNT7	novel	4307	12	NA	NA	13	-3	no_combination_of_known_junctions	FALSE	canonical	1	6770	junction_4	117929.02352385523	NA	2	1	TRUE	NA	NA	NA	C	coding	311	936	71	1006	5.0	-435	False	AATAAA	-16
PB.4333.2	chr16	-	5230	20	novel_in_catalog	EIF3CL	novel	3053	21	NA	NA	9	-134	intron_retention	TRUE	canonical	1	4489	junction_19	43343.453543084805	NA	1	NA	TRUE	NA	NA	NA	A	coding	748	2247	77	2323	5.0	NA	False	ACTAAA	-16
PB.9069.5	chr4	+	4529	13	novel_not_in_catalog	GALNT7	novel	4307	12	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	227	junction_2	136751.84450056078	NA	4	NA	TRUE	NA	NA	NA	C	coding	607	1824	456	2279	0.0	-437	False	AATAAA	-19
PB.4333.1	chr16	+	1726	11	incomplete-splice_match	EIF3C	ENST00000565932.5	3957	13	3127	-2	-1880	0	5prime_fragment	FALSE	canonical	1	12032	junction_3	8459.194595822939	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	77	1642	5.0	NA	False	ACTAAA	-17
PB.8397.12	chr3	+	4664	12	novel_not_in_catalog	ATP2C1	novel	4888	27	NA	NA	26	3134	any annotated donor/acceptor	FALSE	canonical	1	803	junction_5	311207.34075049026	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	713	1294	95.0	-142	False	NA	NA
PB.3682.13	chr14	+	3509	17	novel_not_in_catalog	MARK3	novel	2643	16	NA	NA	-9	0	intron_retention	FALSE	canonical	1	5103	junction_1	219139.46875875897	NA	6	1	TRUE	NA	NA	NA	C	coding	715	2148	762	2909	25.0	-13	True	ATTAAA	-19
PB.6489.13	chr2	-	4189	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	43	junction_25	364572.1398856122	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	100	3303	15.0	26	True	AATAAA	-16
PB.9069.3	chr4	+	2062	12	full-splice_match	GALNT7	ENST00000265000.8	4307	12	-1	2246	-1	-290	multi-exon	FALSE	canonical	1	227341	junction_6	66964.01459103808	NA	10	1	TRUE	NA	NA	NA	C	coding	657	1974	85	2058	70.0	-449	False	AATGAA	-24
PB.4290.4	chr16	-	3059	5	novel_in_catalog	GPRC5B	novel	5213	4	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	1058	junction_4	217157.2070943076	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	345	1532	15.0	2624	False	AATAAA	-17
PB.4290.5	chr16	-	2871	4	full-splice_match	GPRC5B	ENST00000300571.6	5213	4	60	2282	7	-2	multi-exon	FALSE	canonical	1	157878	junction_3	134316.30239434412	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	133	1344	15.0	-13	True	AATAAA	-17
PB.4290.3	chr16	-	3931	4	full-splice_match	GPRC5B	ENST00000300571.6	5213	4	29	1253	16	554	multi-exon	FALSE	canonical	1	157878	junction_3	134316.30239434412	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	164	1375	15.0	2611	False	ATTAAA	-24
PB.4290.1	chr16	-	4561	4	full-splice_match	GPRC5B	ENST00000300571.6	5213	4	47	605	-6	3	multi-exon	FALSE	canonical	1	157878	junction_3	134316.30239434412	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	146	1357	20.0	-26	True	AATAAA	-18
PB.11774.1	chr9	-	4095	2	full-splice_match	ZBTB6	ENST00000373659.3	4106	2	12	-1	12	1	multi-exon	FALSE	canonical	1	103632	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	78	1352	25.0	-7	True	AATAAA	-19
PB.11629.9	chr9	-	2041	10	full-splice_match	GOLM1	ENST00000388712.7	3046	10	9	996	9	-995	multi-exon	FALSE	canonical	1	164229	junction_9	319263.51545253507	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	161	1366	20.0	-21	True	NA	NA
PB.11774.3	chr9	-	2994	2	full-splice_match	ZBTB6	ENST00000373659.3	4106	2	3	1109	3	-1109	multi-exon	FALSE	canonical	1	103632	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	87	1361	25.0	-16	True	TATAAA	-34
PB.4082.1	chr15	+	2766	19	full-splice_match	FES	ENST00000328850.7	2829	19	59	4	2	-4	multi-exon	FALSE	canonical	1	106917	junction_1	49121.8717251061	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	84	2552	20.0	2	True	AATAAA	-16
PB.9069.1	chr4	+	3777	12	full-splice_match	GALNT7	ENST00000265000.8	4307	12	25	505	25	335	multi-exon	FALSE	canonical	1	227341	junction_6	66964.01459103808	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	59	2032	70.0	-4	True	AATAAA	-9
PB.4082.2	chr15	+	2865	19	novel_in_catalog	FES	novel	485	2	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	23397	junction_1	60008.945903460466	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	181	2649	25.0	0	True	AATAAA	-18
PB.11629.2	chr9	-	3075	10	full-splice_match	GOLM1	ENST00000388711.7	3022	10	-51	-2	-27	1	multi-exon	FALSE	canonical	1	68765	junction_9	344294.732567503	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	228	1403	30.0	0	True	AATAAA	-19
PB.11629.1	chr9	-	2964	10	full-splice_match	GOLM1	ENST00000388712.7	3046	10	26	56	26	-55	multi-exon	FALSE	canonical	1	164229	junction_9	319263.51545253507	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	144	1349	25.0	-4	True	AATAAA	-15
PB.7403.7	chr20	+	3775	32	full-splice_match	COL9A3	ENST00000649368.1	2497	32	0	-1278	0	1278	multi-exon	FALSE	canonical	1	47673	junction_1	46124.37463912283	NA	14	3	TRUE	NA	NA	NA	C	coding	684	2055	16	2070	35.0	0	True	AATAAA	-12
PB.11629.4	chr9	-	2747	10	novel_not_in_catalog	GOLM1	novel	3046	10	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	12360	junction_1	399099.58129689645	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	179	1321	35.0	-39	True	AATAAA	-17
PB.8397.13	chr3	+	4882	28	full-splice_match	ATP2C1	ENST00000510168.5	5067	28	225	-40	11	-3	multi-exon	FALSE	canonical	1	56424	junction_1	239457.59833480822	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	326	3085	30.0	-12	True	AATAAA	-16
PB.1793.9	chr11	-	3297	12	full-splice_match	TPP1	ENST00000644218.1	3292	12	8	-13	0	-1	multi-exon	FALSE	canonical	1	7334	junction_5	284442.58113148913	NA	7	1	TRUE	NA	NA	NA	C	coding	500	1503	22	1524	30.0	0	True	NA	NA
PB.1793.5	chr11	-	2717	9	novel_not_in_catalog	AC091564.7	novel	1349	9	NA	NA	-2842	-1889	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	312203.62517954526	NA	2	1	TRUE	NA	NA	NA	A	coding	236	711	10	720	30.0	-15	False	NA	NA
PB.1793.3	chr11	-	3643	12	full-splice_match	TPP1	ENST00000644831.1	3620	12	0	-23	0	1	multi-exon	FALSE	canonical	1	647421	junction_11	140102.9178705237	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	906	1868	25.0	-8	True	NA	NA
PB.1793.2	chr11	-	3495	13	full-splice_match	TPP1	ENST00000299427.11	3560	13	56	9	0	0	multi-exon	FALSE	canonical	1	647421	junction_12	134360.3364653289	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	3	1721	30.0	-8	True	NA	NA
PB.10136.2	chr6	-	1694	9	full-splice_match	RTN4IP1	ENST00000369063.7	1682	9	-3	-9	-3	9	multi-exon	FALSE	canonical	1	46852	junction_8	25749.72863418904	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	470	1660	15.0	-1	True	AATAAA	-30
PB.10136.1	chr6	-	3387	10	novel_not_in_catalog	RTN4IP1	novel	1682	9	NA	NA	-7	12571	any annotated donor/acceptor	FALSE	canonical	1	1210	junction_1	34015.178784307376	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	474	1664	50.0	-5	True	AATAAA	-17
PB.10173.7	chr6	-	1583	12	incomplete-splice_match	HDAC2	ENST00000519065.5	9874	14	136	10359	8	1993	3prime_fragment	FALSE	canonical	1	736423	junction_11	488534.35303761833	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1341	242	1582	70.0	-14	True	AAGAAA	-42
PB.7403.6	chr20	+	2374	31	novel_in_catalog	COL9A3	novel	635	12	NA	NA	-2	-56	no_combination_of_known_junctions	FALSE	canonical	1	91	junction_8	53272.48734239425	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	18	2018	25.0	-2	True	AATAAA	-15
PB.796.2	chr1	-	2433	8	novel_in_catalog	GBAP1	novel	2922	8	NA	NA	8	62	intron_retention	FALSE	canonical	1	14033	junction_6	29813.375056254496	NA	1	NA	TRUE	NA	NA	NA	B	coding	263	792	1299	2090	30.0	0	True	ATTAAA	-17
PB.5484.10	chr18	+	2723	10	incomplete-splice_match	SMAD4	ENST00000342988.7	8769	12	18471	5261	1505	1	5prime_fragment	FALSE	canonical	1	309616	junction_3	79196.99918713406	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	219	1412	30.0	NA	False	AATAAA	-18
PB.8397.10	chr3	+	3571	27	full-splice_match	ATP2C1	ENST00000505330.5	4888	27	160	1157	-28	651	multi-exon	FALSE	canonical	1	81268	junction_1	224764.1897892047	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	67	2928	25.0	-14	True	AGTAAA	-16
PB.2822.11	chr12	+	2992	13	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	95142.1501968677	NA	3	1	TRUE	NA	NA	NA	C	coding	571	1716	127	1842	85.0	-19	True	NA	NA
PB.2822.10	chr12	+	3326	15	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-15	intron_retention	FALSE	canonical	1	9000	junction_5	120892.9906123762	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	668	2173	85.0	-19	True	NA	NA
PB.2822.13	chr12	+	3717	15	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	2	-77	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	96185.33132461263	NA	1	1	TRUE	NA	NA	NA	C	coding	660	1983	88	2070	35.0	-17	True	AATAAA	-29
PB.2822.12	chr12	+	3829	16	full-splice_match	NEDD1	ENST00000266742.8	4046	16	17	200	2	-200	multi-exon	FALSE	canonical	1	85484	junction_2	88245.9272565029	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	323	2305	45.0	-17	True	AATAAA	-17
PB.2822.15	chr12	+	3220	16	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	5	-18	combination_of_known_junctions	FALSE	canonical	1	10923	junction_2	97637.79047129015	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	67	2070	85.0	-14	True	NA	NA
PB.2822.14	chr12	+	3076	14	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	2	-15	no_combination_of_known_junctions	FALSE	canonical	1	3804	junction_1	123860.01942477372	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	349	1923	85.0	-17	True	NA	NA
PB.2822.17	chr12	+	3760	15	full-splice_match	NEDD1	ENST00000429527.6	3366	15	32	-426	-1	0	multi-exon	FALSE	canonical	1	16117	junction_1	93485.36442422746	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	54	2036	40.0	-1	True	NA	NA
PB.5228.1	chr17	+	2650	9	full-splice_match	RAB37	ENST00000392613.9	2617	9	3	-36	1	1	multi-exon	FALSE	canonical	1	110916	junction_1	53027.08890274857	NA	0	NA	TRUE	NA	NA	NA	A	coding	223	672	54	725	10.0	0	True	ATTAAA	-22
PB.2822.19	chr12	+	3443	16	full-splice_match	NEDD1	ENST00000266742.8	4046	16	29	574	-5	-18	multi-exon	FALSE	canonical	1	85484	junction_2	88245.9272565029	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	311	2293	85.0	-5	True	NA	NA
PB.2822.18	chr12	+	3338	15	full-splice_match	NEDD1	ENST00000429527.6	3366	15	27	1	-6	-1	multi-exon	FALSE	canonical	1	16117	junction_1	93485.36442422746	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	59	2041	25.0	-6	True	AATAAA	-19
PB.9268.2	chr5	-	3236	3	novel_not_in_catalog	AK6	novel	1648	5	NA	NA	0	-9250	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	211224.0	NA	5	1	TRUE	NA	NA	NA	B	coding	264	795	2241	3035	10.0	-1	True	AATAAA	-18
PB.9268.3	chr5	-	1930	2	incomplete-splice_match	AK6	ENST00000618980.1	483	4	-50	9252	2	-9252	3prime_fragment	FALSE	canonical	1	745631	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	264	795	937	1731	10.0	-21	True	AATAAA	-16
PB.886.6	chr1	+	2749	8	novel_not_in_catalog	UHMK1	novel	8117	8	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	1	1348	junction_1	175681.28116319864	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	379	1245	70.0	-26	True	TATAAA	-35
PB.10173.3	chr6	-	1922	13	novel_in_catalog	HDAC2	novel	9874	14	NA	NA	-6	2	no_combination_of_known_junctions	FALSE	canonical	1	6560	junction_8	632230.6954792206	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	798	1580	15.0	-28	True	ATTAAA	-16
PB.5254.9	chr17	-	1007	4	full-splice_match	H3F3B	ENST00000254810.8	2705	4	0	1698	0	-60	multi-exon	FALSE	canonical	1	3479945	junction_3	1304784.9093197954	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	134	544	80.0	-2	True	NA	NA
PB.5254.8	chr17	-	1116	4	full-splice_match	H3F3B	ENST00000254810.8	2705	4	0	1589	0	-3	multi-exon	FALSE	canonical	1	3479945	junction_3	1304784.9093197954	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	134	544	15.0	-2	True	ATTAAA	-14
PB.886.7	chr1	+	2849	7	novel_in_catalog	UHMK1	novel	8117	8	NA	NA	16	0	no_combination_of_known_junctions	FALSE	canonical	1	4522	junction_3	194532.37451956994	NA	6	1	TRUE	NA	NA	NA	C	coding	254	765	181	945	70.0	-25	True	TATAAA	-35
PB.262.10	chr1	+	2376	12	novel_not_in_catalog	RBBP4	novel	1788	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1335	junction_1	169319.37051428985	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	260	1432	25.0	275	False	AATAAA	-13
PB.5254.1	chr17	-	3350	1	full-splice_match	H3F3B	ENST00000586518.1	1701	1	-6	-1643	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	AATAAA	-20
PB.8571.2	chr3	-	3644	7	full-splice_match	EHHADH	ENST00000231887.7	3850	7	20	186	20	-186	multi-exon	FALSE	canonical	1	56197	junction_6	11245.502830761578	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	57	2228	45.0	-2	True	AATAAA	-20
PB.5254.3	chr17	-	2877	2	full-splice_match	H3F3B	ENST00000589949.1	842	2	-12	-2023	0	4	multi-exon	FALSE	canonical	1	3479945	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	AATAAA	-19
PB.5254.2	chr17	-	2793	3	full-splice_match	H3F3B	ENST00000589417.1	575	3	0	-2218	0	5	multi-exon	FALSE	canonical	1	3479945	junction_2	285514.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-20
PB.5254.5	chr17	-	2136	4	full-splice_match	H3F3B	ENST00000254810.8	2705	4	2	567	1	-567	multi-exon	FALSE	canonical	1	3479945	junction_3	1304784.9093197954	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	132	542	25.0	0	True	ATTAAA	-19
PB.5254.4	chr17	-	2701	4	full-splice_match	H3F3B	ENST00000254810.8	2705	4	1	3	0	-3	multi-exon	TRUE	canonical	1	3479945	junction_3	1304784.9093197954	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	133	543	25.0	-1	True	AATAAA	-12
PB.5254.7	chr17	-	2316	1	full-splice_match	H3F3B	ENST00000586518.1	1701	1	-4	-611	2	559	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	1	True	AATAAA	-12
PB.5254.6	chr17	-	1837	4	full-splice_match	H3F3B	ENST00000254810.8	2705	4	-159	1027	-158	559	multi-exon	FALSE	canonical	1	3479945	junction_3	1304784.9093197954	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	293	703	45.0	5606	False	AATAAA	-12
PB.11092.7	chr8	+	4565	18	full-splice_match	DDHD2	ENST00000397166.6	4921	18	289	67	-39	0	multi-exon	FALSE	canonical	1	97911	junction_1	87955.87094076266	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	327	2372	25.0	24	True	AGTAAA	-16
PB.10957.1	chr7	+	3760	25	full-splice_match	WDR60	ENST00000407559.7	3769	25	6	3	6	-3	multi-exon	FALSE	canonical	1	64453	junction_1	24837.41958687285	NA	2	NA	TRUE	NA	NA	NA	A	coding	1066	3201	153	3353	35.0	-21	True	ATTAAA	-17
PB.11092.5	chr8	+	2528	17	incomplete-splice_match	DDHD2	ENST00000397166.6	4921	18	268	2577	-60	2	3prime_fragment	FALSE	canonical	1	97911	junction_1	89010.1271155423	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	258	2393	30.0	3	True	AATATA	-20
PB.4922.1	chr17	+	1512	7	full-splice_match	DHRS11	ENST00000618403.4	1598	7	82	4	-2	0	multi-exon	FALSE	canonical	1	109188	junction_1	54925.562551359755	NA	1	NA	TRUE	NA	NA	NA	A	coding	260	783	131	913	20.0	-20	True	ATTAAA	-18
PB.8433.19	chr3	+	3727	4	full-splice_match	SLC25A36	ENST00000507429.5	3537	4	-49	-141	-3	141	multi-exon	FALSE	canonical	1	268130	junction_2	8233.680478511553	NA	4	NA	TRUE	NA	NA	NA	C	coding	132	399	218	616	70.0	-5	True	NA	NA
PB.8433.18	chr3	+	2053	9	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	-5	511	no_combination_of_known_junctions	FALSE	canonical	1	9019	junction_5	163593.7782729202	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	220	630	5.0	-7	True	AGTAAA	-29
PB.10442.9	chr7	-	4756	23	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-28	796	combination_of_known_junctions	FALSE	canonical	1	29769	junction_8	60642.95843686394	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	484	2409	25.0	-62	True	AATACA	-15
PB.10442.8	chr7	-	4254	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-11	803	combination_of_known_junctions	FALSE	canonical	1	68426	junction_14	56848.26795966263	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	467	3034	25.0	-45	True	AATACA	-22
PB.10442.7	chr7	-	4665	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	10	1235	combination_of_known_junctions	FALSE	canonical	1	68426	junction_14	56848.26795966263	NA	2	NA	TRUE	NA	NA	NA	C	coding	855	2568	446	3013	45.0	-24	True	ATTAAA	-25
PB.12100.6	chrX	+	2583	14	full-splice_match	TRO	ENST00000445561.5	2597	14	6	8	-2	-6	multi-exon	FALSE	canonical	1	38356	junction_12	42424.607143613495	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	87	2132	35.0	-2	True	ATTAAA	-6
PB.10442.5	chr7	-	6639	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	5	-8	combination_of_known_junctions	FALSE	canonical	1	34018	junction_11	62364.17146057277	NA	4	1	TRUE	NA	NA	NA	C	coding	850	2553	451	3003	40.0	-29	True	AATAAA	-9
PB.10442.4	chr7	-	6662	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	1	68426	junction_14	56848.26795966263	NA	1	NA	TRUE	NA	NA	NA	C	coding	855	2568	459	3026	40.0	-37	True	AATAAA	-9
PB.10442.3	chr7	-	7007	22	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-430	-8	combination_of_known_junctions	FALSE	canonical	1	341	junction_21	71893.87231994436	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2553	819	3371	40.0	-150	False	AATAAA	-9
PB.8433.10	chr3	+	4575	6	full-splice_match	SLC25A36	ENST00000453248.6	1040	6	-81	-3454	-10	2	multi-exon	FALSE	canonical	1	6289	junction_2	170670.66473415986	NA	3	NA	TRUE	NA	NA	NA	C	coding	285	858	236	1093	30.0	-23	True	ATTAAA	-12
PB.10442.1	chr7	-	6797	23	full-splice_match	OSBPL3	ENST00000313367.6	6760	23	-34	-3	-34	3	multi-exon	TRUE	canonical	1	104396	junction_15	53854.266638315916	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	490	3150	5.0	-68	True	AATAAA	-20
PB.8433.12	chr3	+	4840	9	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	-7	2	no_combination_of_known_junctions	FALSE	canonical	1	9019	junction_5	163593.7782729202	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	233	643	30.0	-20	True	ATTAAA	-12
PB.2606.20	chr12	+	3947	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	-7	2487	3	0	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	1	NA	TRUE	NA	NA	NA	C	coding	724	2175	120	2294	50.0	-3	True	ATTAAA	-20
PB.2606.21	chr12	+	3734	15	full-splice_match	LARP4	ENST00000347328.9	3621	15	-93	-20	3	0	multi-exon	FALSE	canonical	1	29538	junction_8	74909.90427445601	NA	1	NA	TRUE	NA	NA	NA	C	coding	653	1962	120	2081	50.0	-3	True	ATTAAA	-20
PB.2606.22	chr12	+	2076	15	full-splice_match	LARP4	ENST00000347328.9	3621	15	-90	1635	0	-100	multi-exon	FALSE	canonical	1	29538	junction_8	74909.90427445601	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	117	2075	65.0	0	True	NA	NA
PB.2606.23	chr12	+	2928	17	novel_in_catalog	LARP4	novel	567	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	56771	junction_2	75630.94352842624	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	372	2336	40.0	4	True	AGTAAA	-15
PB.2606.24	chr12	+	4224	16	novel_in_catalog	LARP4	novel	567	4	NA	NA	3	451	intron_retention	FALSE	canonical	1	29538	junction_9	80955.19777133249	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	369	2120	45.0	7	True	AATAAA	-9
PB.12100.4	chrX	+	4637	13	novel_in_catalog	TRO	novel	1196	2	NA	NA	-1	4	intron_retention	FALSE	canonical	1	67044	junction_9	36524.65479673741	NA	1	1	TRUE	NA	NA	NA	C	coding	1431	4296	99	4394	15.0	-1798	False	ATTAAA	-18
PB.2606.26	chr12	+	6396	16	novel_not_in_catalog	LARP4	novel	567	4	NA	NA	162	-18	intron_retention	FALSE	canonical	1	9081	junction_1	79113.89949686464	NA	3	NA	TRUE	NA	NA	NA	C	coding	654	1965	318	2282	75.0	185	False	NA	NA
PB.8517.10	chr3	-	5553	33	full-splice_match	TNIK	ENST00000436636.6	6970	33	3	1414	0	508	multi-exon	FALSE	canonical	1	46416	junction_19	38789.98367792127	NA	0	NA	TRUE	NA	NA	NA	C	coding	1360	4083	343	4425	0.0	-1	True	AATAAA	-16
PB.8397.16	chr3	+	4327	28	full-splice_match	ATP2C1	ENST00000510168.5	5067	28	10	730	10	-730	multi-exon	FALSE	canonical	1	56424	junction_1	239457.59833480822	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	541	3300	30.0	-5	True	AATAAA	-37
PB.8517.11	chr3	-	5483	32	full-splice_match	TNIK	ENST00000357327.9	3996	32	-359	-1128	-14	508	multi-exon	FALSE	canonical	1	54308	junction_13	32693.910546110663	NA	0	NA	TRUE	NA	NA	NA	C	coding	1331	3996	360	4355	0.0	-18	True	AATAAA	-16
PB.8517.12	chr3	-	5532	31	full-splice_match	TNIK	ENST00000470834.5	3972	31	-432	-1128	-87	508	multi-exon	FALSE	canonical	1	88250	junction_28	26537.93342178115	NA	6	NA	TRUE	NA	NA	NA	C	coding	1323	3972	433	4404	0.0	-27	False	AATAAA	-16
PB.9080.4	chr4	+	6627	23	full-splice_match	WWC2	ENST00000403733.7	8826	23	-40	2239	-40	104	multi-exon	FALSE	canonical	1	80707	junction_1	37543.83487176156	NA	3	NA	TRUE	NA	NA	NA	C	coding	1192	3579	240	3818	15.0	-26	True	AAAAAG	-33
PB.9080.5	chr4	+	2864	17	incomplete-splice_match	WWC2	ENST00000448232.6	6356	23	-235	37592	-36	-544	3prime_fragment	FALSE	canonical	1	80707	junction_1	38556.07488000229	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2628	236	2863	65.0	-22	True	NA	NA
PB.9080.6	chr4	+	4445	23	full-splice_match	WWC2	ENST00000403733.7	8826	23	-35	4416	-35	412	multi-exon	FALSE	canonical	1	80707	junction_1	37543.83487176156	NA	3	NA	TRUE	NA	NA	NA	C	coding	1192	3579	235	3813	75.0	-21	True	TATAAA	-16
PB.8517.13	chr3	-	5302	31	full-splice_match	TNIK	ENST00000341852.10	4727	31	2	-577	-1	508	multi-exon	FALSE	canonical	1	20410	junction_17	38730.165316742736	NA	0	NA	TRUE	NA	NA	NA	C	coding	1276	3831	344	4174	0.0	-2	True	AATAAA	-16
PB.9080.1	chr4	+	5319	23	full-splice_match	WWC2	ENST00000403733.7	8826	23	-102	3609	-102	-16	multi-exon	FALSE	canonical	1	80707	junction_1	37543.83487176156	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	302	3880	75.0	-88	False	AAGAAA	-33
PB.9080.2	chr4	+	6437	23	full-splice_match	WWC2	ENST00000403733.7	8826	23	-77	2466	-77	8	multi-exon	FALSE	canonical	1	80707	junction_1	37543.83487176156	NA	2	NA	TRUE	NA	NA	NA	C	coding	1192	3579	277	3855	35.0	-63	False	AATAAA	-24
PB.9080.3	chr4	+	4019	23	full-splice_match	WWC2	ENST00000403733.7	8826	23	-46	4853	-46	-25	multi-exon	FALSE	canonical	1	80707	junction_1	37543.83487176156	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	246	3824	75.0	-32	True	NA	NA
PB.10434.1	chr7	+	2633	11	novel_not_in_catalog	GPNMB	novel	793	6	NA	NA	-10	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	271634.9768974717	NA	3	NA	TRUE	NA	NA	NA	C	coding	542	1629	123	1751	30.0	-7484	False	AATAAA	-15
PB.10434.2	chr7	+	2650	11	full-splice_match	GPNMB	ENST00000381990.6	2763	11	113	0	36	0	multi-exon	FALSE	canonical	1	119300	junction_6	215359.04005824786	NA	3	NA	TRUE	NA	NA	NA	C	coding	572	1719	49	1767	30.0	-7410	False	AATAAA	-16
PB.10434.3	chr7	+	3802	1	novel_in_catalog	GPNMB	novel	793	6	NA	NA	0	-2800	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	1446	1757	75.0	-9	True	NA	NA
PB.10434.4	chr7	+	2542	11	full-splice_match	GPNMB	ENST00000258733.8	2862	11	319	1	108	0	multi-exon	FALSE	canonical	1	499001	junction_6	131437.70821556498	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	88	1659	30.0	-7338	False	AATAAA	-16
PB.10434.5	chr7	+	2484	10	novel_in_catalog	GPNMB	novel	793	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4697	junction_3	262243.1589767382	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	93	1601	30.0	-9	True	AATAAA	-16
PB.10434.6	chr7	+	2087	6	novel_not_in_catalog	GPNMB	novel	793	6	NA	NA	0	1729	intron_retention	FALSE	canonical	1	2873	junction_5	265893.81373653654	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	93	851	85.0	-9	True	NA	NA
PB.10434.7	chr7	+	1999	11	full-splice_match	GPNMB	ENST00000258733.8	2862	11	203	660	0	-102	multi-exon	FALSE	canonical	1	499001	junction_6	131437.70821556498	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	93	1775	15.0	-9	True	GATAAA	-17
PB.10434.8	chr7	+	1374	4	full-splice_match	GPNMB	ENST00000409458.3	1673	4	59	240	0	-240	multi-exon	FALSE	canonical	1	584985	junction_1	37466.391988910094	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	91	711	70.0	-7	True	TTTAAA	-34
PB.10434.9	chr7	+	2601	11	novel_in_catalog	GPNMB	novel	793	6	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	3162	junction_6	356450.82389042113	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	91	1719	30.0	-7	True	AATAAA	-15
PB.10569.1	chr7	+	2229	11	novel_in_catalog	CCT6P1	novel	1544	14	NA	NA	-89	867	combination_of_known_junctions	FALSE	canonical	1	951	junction_2	51835.09340832714	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-30	True	AATAAA	-17
PB.9101.1	chr4	+	1884	3	antisense	novelGene_SORBS2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	74	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	AGTAAA	-36
PB.10569.4	chr7	+	1964	10	novel_in_catalog	CCT6P1	novel	1544	14	NA	NA	3457	868	combination_of_known_junctions	FALSE	canonical	1	951	junction_2	49442.28938374692	NA	5	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	3484	False	AATAAA	-18
PB.4329.7	chr16	+	3010	11	novel_not_in_catalog	KIAA0556	novel	6616	28	NA	NA	-16686	-6	any annotated donor/acceptor	FALSE	canonical	1	234	junction_1	50554.734226281915	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	254	1276	35.0	47	False	AATAAA	-45
PB.4329.5	chr16	+	6740	29	novel_in_catalog	KIAA0556	novel	440	2	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	1	42335	junction_7	31471.55578347531	NA	11	2	TRUE	NA	NA	NA	C	coding	1661	4986	23	5008	40.0	5	True	AATAAA	-43
PB.4329.4	chr16	+	2488	8	incomplete-splice_match	KIAA0556	ENST00000261588.8	6616	28	-5	97315	-5	5123	3prime_fragment	FALSE	canonical	1	32730	junction_6	26632.480513195052	NA	3	1	TRUE	NA	NA	NA	C	coding	320	963	25	987	30.0	3	True	NA	NA
PB.4329.3	chr16	+	6666	28	novel_in_catalog	KIAA0556	novel	440	2	NA	NA	-6	-8	combination_of_known_junctions	FALSE	canonical	1	5240	junction_2	34446.59540826714	NA	1	NA	TRUE	NA	NA	NA	C	coding	1439	4320	615	4934	40.0	2	True	AATAAA	-43
PB.4329.2	chr16	+	5670	26	novel_in_catalog	KIAA0556	novel	440	2	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	1	2650	junction_13	38140.18025056515	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	2213	3937	40.0	1	True	AATAAA	-44
PB.4329.1	chr16	+	6616	28	full-splice_match	KIAA0556	ENST00000261588.8	6616	28	-7	7	-7	-7	multi-exon	TRUE	canonical	1	32730	junction_6	31969.57239839277	NA	0	NA	TRUE	NA	NA	NA	C	coding	1618	4857	27	4883	40.0	1	True	AATAAA	-44
PB.8406.6	chr3	-	2900	20	full-splice_match	ACAD11	ENST00000264990.10	4142	20	866	376	-13	-48	multi-exon	FALSE	canonical	1	100756	junction_6	46408.69951592054	NA	2	NA	TRUE	NA	NA	NA	C	coding	780	2343	107	2449	85.0	-1	True	NA	NA
PB.1943.2	chr11	-	2824	17	full-splice_match	SSRP1	ENST00000278412.6	2819	17	-13	8	-13	-7	multi-exon	FALSE	canonical	1	431324	junction_16	567481.5589308828	NA	39	4	TRUE	NA	NA	NA	C	coding	709	2130	281	2410	25.0	-23	True	AATAAA	-14
PB.8406.8	chr3	-	3073	20	novel_in_catalog	ACAD11	novel	3684	19	NA	NA	-13	-50	combination_of_known_junctions	FALSE	canonical	1	37268	junction_6	54422.93006799244	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	107	1900	80.0	-1	True	NA	NA
PB.8163.2	chr3	+	1984	9	novel_in_catalog	PPM1M	novel	2193	10	NA	NA	-48	-2	combination_of_known_junctions	FALSE	canonical	1	31246	junction_2	88497.60174566526	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	81	1205	30.0	-14	True	ATTAAA	-11
PB.1943.1	chr11	-	2598	16	novel_in_catalog	SSRP1	novel	2819	17	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	3938	junction_8	750491.4569960911	NA	2	NA	TRUE	NA	NA	NA	C	coding	635	1908	270	2177	10.0	-12	True	AATAAA	-21
PB.1943.6	chr11	-	2317	16	incomplete-splice_match	SSRP1	ENST00000278412.6	2819	17	-15	741	-15	146	3prime_fragment	FALSE	canonical	1	431324	junction_15	585962.9468387533	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2034	283	2316	50.0	-25	True	NA	NA
PB.1943.7	chr11	-	2050	16	incomplete-splice_match	SSRP1	ENST00000278412.6	2819	17	121	872	95	15	3prime_fragment	FALSE	canonical	1	431324	junction_15	585962.9468387533	NA	41	5	TRUE	NA	NA	NA	C	coding	634	1902	147	2048	60.0	111	False	AATACA	-35
PB.812.1	chr1	-	2934	14	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	113514	junction_3	114907.15038241056	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	39	1571	0.0	-3	True	AATAAA	-17
PB.6377.4	chr2	+	2252	14	novel_in_catalog	SNX17	novel	2400	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	804876	junction_1	289965.5986420156	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	130	861	10.0	-5	True	ATTAAA	-20
PB.465.39	chr1	-	2612	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	5	-514	5	514	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	95	1276	35.0	23	False	ATTAAA	-23
PB.5462.3	chr18	-	1859	12	full-splice_match	ATP5F1A	ENST00000398752.10	5818	12	59	3900	1	2	multi-exon	FALSE	canonical	1	2196075	junction_10	1033747.0336785046	NA	62	5	TRUE	NA	NA	NA	C	coding	553	1662	64	1725	10.0	-10	True	AATAAA	-16
PB.5462.4	chr18	-	1932	12	full-splice_match	ATP5F1A	ENST00000590156.5	1931	12	1	-2	1	2	multi-exon	FALSE	canonical	1	15732	junction_10	1497962.0900346327	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	287	1798	10.0	-10	True	AATAAA	-16
PB.10947.9	chr7	+	6200	18	novel_in_catalog	RBM33	novel	1404	6	NA	NA	-17	2023	combination_of_known_junctions	FALSE	canonical	1	73477	junction_7	93907.39824336191	NA	6	NA	TRUE	NA	NA	NA	C	coding	1180	3543	216	3758	60.0	1	True	AATGAA	-29
PB.5462.7	chr18	-	1997	11	novel_in_catalog	ATP5F1A	novel	5818	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	2196075	junction_9	1071428.5651085845	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	64	1824	15.0	-10	True	AATAAA	-14
PB.5462.8	chr18	-	1949	11	novel_in_catalog	ATP5F1A	novel	5818	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	2196075	junction_9	999386.3152441102	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	720	1817	15.0	-12	True	AATAAA	-14
PB.5462.9	chr18	-	1888	12	novel_not_in_catalog	ATP5F1A	novel	5818	12	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	2489	junction_1	1585372.715730112	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	60	1715	15.0	-6	True	AATAAA	-14
PB.10947.5	chr7	+	6523	18	full-splice_match	RBM33	ENST00000401878.7	10149	18	-19	3645	-19	2374	multi-exon	FALSE	canonical	1	87643	junction_14	92687.07400505949	NA	38	NA	TRUE	NA	NA	NA	C	coding	1170	3513	218	3730	15.0	-1	True	TATAAA	-25
PB.10947.4	chr7	+	5963	6	full-splice_match	RBM33	ENST00000287912.7	1404	6	208	-4767	-20	4460	multi-exon	FALSE	canonical	1	184137	junction_1	86508.7843599712	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	219	1025	80.0	-2	True	AGTAAA	-6
PB.10947.3	chr7	+	6400	18	novel_in_catalog	RBM33	novel	1404	6	NA	NA	-20	2247	combination_of_known_junctions	TRUE	canonical	1	51758	junction_14	95793.52305567786	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	219	3734	30.0	-2	True	ATTAAA	-26
PB.465.36	chr1	-	3036	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-19	-1396	-5	-433	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	5	1	TRUE	NA	NA	NA	C	coding	402	1209	92	1300	35.0	26	False	AATATA	-20
PB.10947.1	chr7	+	3830	14	incomplete-splice_match	RBM33	ENST00000401878.7	10149	18	-27	35251	-27	508	3prime_fragment	FALSE	canonical	1	88603	junction_7	97308.12361503683	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	226	3213	15.0	-9	True	AATAAA	-20
PB.465.34	chr1	-	3232	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-28	-1583	-1	-246	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	101	1309	40.0	1	True	TATAAA	-45
PB.6882.11	chr2	+	4835	18	novel_not_in_catalog	ITPRID2	novel	2526	2	NA	NA	95	-2	any annotated donor/acceptor	FALSE	canonical	1	2647	junction_1	185895.60521678152	NA	8	1	TRUE	NA	NA	NA	C	coding	1106	3321	326	3646	15.0	-7796	False	AATAAA	-17
PB.6377.7	chr2	+	2051	15	full-splice_match	SNX17	ENST00000233575.6	2044	15	98	-105	0	105	multi-exon	FALSE	canonical	1	804876	junction_1	281542.6302421959	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	125	1537	10.0	0	True	NA	NA
PB.8294.2	chr3	-	4583	3	intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3079	junction_1	111.5	NA	6	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	7	True	NA	NA
PB.8294.1	chr3	-	2654	3	intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1245	junction_1	118.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-17	True	NA	NA
PB.1357.13	chr10	-	2112	14	novel_not_in_catalog	ARHGAP12	novel	4958	19	NA	NA	0	-153	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	67957.19301470499	NA	1	1	TRUE	NA	NA	NA	C	coding	474	1425	249	1673	70.0	-1	True	TTTAAA	-28
PB.10983.10	chr8	+	3283	13	novel_not_in_catalog	BLK	novel	2159	12	NA	NA	-7433	0	intron_retention	FALSE	canonical	1	4846	junction_1	65003.2865119462	NA	3	1	TRUE	NA	NA	NA	C	coding	242	729	2065	2793	10.0	-7751	False	AATAAA	-15
PB.1357.16	chr10	-	1698	9	novel_not_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-26	-11314	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67732.56234714124	NA	1	1	TRUE	NA	NA	NA	C	coding	474	1422	275	1696	45.0	-27	True	ATTAAA	-18
PB.1357.15	chr10	-	1981	13	novel_not_in_catalog	ARHGAP12	novel	4958	19	NA	NA	-15	-158	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	73661.45922747413	NA	1	1	TRUE	NA	NA	NA	C	coding	427	1284	264	1547	75.0	-16	True	TTTAAA	-23
PB.1357.14	chr10	-	1949	13	novel_in_catalog	ARHGAP12	novel	4958	19	NA	NA	2	-157	combination_of_known_junctions	FALSE	canonical	1	35234	junction_6	68027.37408384257	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1701	247	1947	75.0	1	True	TTTAAA	-24
PB.8594.1	chr3	+	4811	14	novel_not_in_catalog	TP63	novel	546	3	NA	NA	-224	-20	any annotated donor/acceptor	FALSE	canonical	1	5953	junction_1	48291.918810280236	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	140	2065	80.0	0	True	NA	NA
PB.8397.15	chr3	+	3533	28	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	69	-2	combination_of_known_junctions	FALSE	canonical	1	53219	junction_1	247170.108861712	NA	8	NA	TRUE	NA	NA	NA	C	coding	933	2802	297	3098	10.0	0	True	ATTAAA	-4
PB.6377.2	chr2	+	1988	15	novel_not_in_catalog	SNX17	novel	2400	14	NA	NA	-6	-1	any annotated donor/acceptor	TRUE	canonical	1	13856	junction_12	441553.93570248253	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	136	1581	10.0	-11	True	ATTAAA	-19
PB.6377.3	chr2	+	1908	15	novel_in_catalog	SNX17	novel	2400	14	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	4358	junction_2	542186.6146783857	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	729	1499	5.0	-6	True	ATTAAA	-21
PB.2298.1	chr11	+	2504	15	full-splice_match	RNF214	ENST00000300650.8	2755	15	46	205	-32	-205	multi-exon	FALSE	canonical	1	42980	junction_1	50573.436368335126	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	63	2174	15.0	-24	True	TATAAA	-18
PB.3044.8	chr13	+	2679	25	novel_in_catalog	IFT88	novel	2856	26	NA	NA	-13	-6	intron_retention	FALSE	canonical	1	6068	junction_13	27791.632523685923	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	111	2498	45.0	-7	True	AATAAA	-8
PB.3044.9	chr13	+	3093	27	novel_in_catalog	IFT88	novel	2856	26	NA	NA	-12	-6	intron_retention	FALSE	canonical	1	21778	junction_1	28556.10472758877	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	411	2912	45.0	-6	True	AATAAA	-8
PB.3044.6	chr13	+	3157	26	full-splice_match	IFT88	ENST00000351808.9	2856	26	75	-376	6	301	multi-exon	FALSE	canonical	1	67075	junction_13	21424.523117213135	NA	1	1	TRUE	NA	NA	NA	C	coding	824	2475	120	2594	15.0	-16	True	ATTAAA	-17
PB.3044.7	chr13	+	2682	25	novel_in_catalog	IFT88	novel	2856	26	NA	NA	6	-3	intron_retention	FALSE	canonical	1	1750	junction_1	28571.586166707602	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	270	2498	30.0	-16	True	AATAAA	-11
PB.3044.4	chr13	+	2788	26	full-splice_match	IFT88	ENST00000351808.9	2856	26	69	-1	0	1	multi-exon	FALSE	canonical	1	67075	junction_13	21424.523117213135	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	126	2600	25.0	-22	True	AATAAA	-15
PB.3044.5	chr13	+	3012	28	full-splice_match	IFT88	ENST00000319980.10	3091	28	1	78	1	-3	multi-exon	FALSE	canonical	1	5951	junction_2	32595.644248886994	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	327	2828	30.0	-21	True	AATAAA	-11
PB.3044.2	chr13	+	2917	27	novel_in_catalog	IFT88	novel	2856	26	NA	NA	-16	1	intron_retention	TRUE	canonical	1	1926	junction_1	30667.427547170413	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	228	2729	25.0	1	True	AATAAA	-15
PB.3044.3	chr13	+	2671	25	novel_in_catalog	IFT88	novel	2856	26	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	19651	junction_24	22957.64103550124	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	127	2490	45.0	-23	True	AATAAA	-8
PB.3044.1	chr13	+	3352	18	incomplete-splice_match	IFT88	ENST00000351808.9	2856	26	75	48413	6	53	3prime_fragment	FALSE	canonical	1	67075	junction_13	17151.929525359723	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	120	1814	55.0	-16	True	AATAAA	-13
PB.8785.1	chr4	-	2118	1	antisense	novelGene_TMEM165_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	106	321	1725	2045	95.0	-6962	False	AATAAA	-45
PB.12301.4	chrX	+	4103	16	full-splice_match	FMR1	ENST00000440235.6	4271	16	155	13	-12	0	multi-exon	FALSE	canonical	1	51793	junction_13	110930.7508156127	NA	2	NA	TRUE	NA	NA	NA	C	coding	586	1761	75	1835	60.0	-6476	False	ATTAAA	-15
PB.9503.2	chr5	+	3697	12	novel_in_catalog	HARS2	novel	2510	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	202966	junction_1	74356.1248049986	NA	16	NA	TRUE	NA	NA	NA	C	coding	365	1098	1849	2946	20.0	-7	True	AATAAA	-11
PB.11098.27	chr8	+	4980	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	106	0	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175210.26939279048	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	396	2228	100.0	41	False	NA	NA
PB.12301.1	chrX	+	4154	16	novel_in_catalog	FMR1	novel	1864	15	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	1	171017	junction_1	93367.00594297514	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	102	1886	60.0	-6503	False	ATTAAA	-15
PB.11098.21	chr8	+	5338	13	full-splice_match	TACC1	ENST00000317827.8	7802	13	211	2253	152	0	multi-exon	FALSE	canonical	1	188558	junction_1	141129.10505298176	NA	4	NA	TRUE	NA	NA	NA	C	coding	805	2418	169	2586	100.0	-3	True	NA	NA
PB.12301.3	chrX	+	4139	16	full-splice_match	FMR1	ENST00000218200.12	4333	16	146	48	-21	-48	multi-exon	FALSE	canonical	1	171017	junction_1	94122.83707501006	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1836	84	1919	30.0	-6485	False	ATTAAA	-15
PB.12301.2	chrX	+	3680	16	novel_in_catalog	FMR1	novel	1864	15	NA	NA	24	-1	combination_of_known_junctions	TRUE	canonical	1	171017	junction_1	93367.00594297514	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	105	1889	35.0	-6506	False	AATAAA	-19
PB.8474.1	chr3	-	2701	1	antisense	novelGene_MBNL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11098.28	chr8	+	2208	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	137	-11	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175959.77619580005	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	365	2110	85.0	72	False	NA	NA
PB.11098.29	chr8	+	4862	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	137	0	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175959.77619580005	NA	28	1	TRUE	NA	NA	NA	C	coding	581	1746	365	2110	100.0	72	False	NA	NA
PB.3444.29	chr14	-	2918	4	incomplete-splice_match	DDHD1	ENST00000357758.3	5603	12	-70	46442	-70	1501	3prime_fragment	FALSE	canonical	1	71431	junction_2	39551.452219440274	NA	2	NA	TRUE	NA	NA	NA	C	coding	430	1293	255	1547	40.0	-39	False	NA	NA
PB.2298.2	chr11	+	2749	15	full-splice_match	RNF214	ENST00000300650.8	2755	15	-4	10	-4	-10	multi-exon	FALSE	canonical	1	42980	junction_1	50573.436368335126	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	113	2224	60.0	-74	True	GATAAA	-19
PB.8562.1	chr3	+	2778	21	full-splice_match	PSMD2	ENST00000310118.8	3449	21	665	6	117	0	multi-exon	FALSE	canonical	1	70149	junction_7	445723.8913699236	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	65	2620	10.0	-1207	False	AATAAA	-14
PB.3444.21	chr14	-	3390	14	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	5	-257	intron_retention	FALSE	canonical	1	7308	junction_12	105195.78739546312	NA	2	NA	TRUE	NA	NA	NA	C	coding	934	2805	102	2906	45.0	114	True	AATATA	-20
PB.3444.20	chr14	-	3167	14	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	-28	-253	intron_retention	FALSE	non_canonical	0	0	junction_13	102479.2830233616	NA	4	NA	TRUE	NA	NA	NA	C	coding	888	2667	13	2679	45.0	3	True	AATATA	-24
PB.3444.23	chr14	-	2871	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	78	2654	0	-595	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	2	NA	TRUE	NA	NA	NA	C	coding	872	2619	107	2725	65.0	109	True	TTTAAA	-13
PB.3444.22	chr14	-	3027	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	85	2491	7	-432	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	13	NA	TRUE	NA	NA	NA	C	coding	872	2619	100	2718	50.0	116	True	NA	NA
PB.3444.25	chr14	-	3024	13	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	27	-595	intron_retention	FALSE	canonical	1	7308	junction_11	106039.75119301435	NA	2	NA	TRUE	NA	NA	NA	C	coding	906	2721	158	2878	65.0	58	True	TTTAAA	-13
PB.4744.1	chr17	+	1744	6	full-splice_match	CD68	ENST00000250092.10	1878	6	131	3	-40	-1	multi-exon	FALSE	canonical	1	885111	junction_1	114863.66446984006	NA	1	NA	TRUE	NA	NA	NA	A	coding	354	1065	81	1145	15.0	-40	True	ATTAAA	-19
PB.3444.27	chr14	-	3762	11	incomplete-splice_match	DDHD1	ENST00000357758.3	5603	12	-19	9348	-19	-806	3prime_fragment	FALSE	canonical	1	71431	junction_9	96152.44712517722	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	204	2645	35.0	12	True	ATTAAA	-15
PB.3444.26	chr14	-	6012	11	incomplete-splice_match	DDHD1	ENST00000357758.3	5603	12	-23	7102	-23	1440	3prime_fragment	FALSE	canonical	1	71431	junction_9	96152.44712517722	NA	4	NA	TRUE	NA	NA	NA	C	coding	813	2442	208	2649	75.0	8	True	CATAAA	-12
PB.7875.2	chr22	-	2246	10	novel_in_catalog	ALG12	novel	5350	10	NA	NA	3	442	combination_of_known_junctions	FALSE	canonical	1	23117	junction_3	86240.83141219514	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	272	1330	60.0	-24	True	AATAAA	-29
PB.7875.3	chr22	-	2473	9	novel_in_catalog	ALG12	novel	5350	10	NA	NA	0	432	intron_retention	FALSE	canonical	1	144973	junction_8	50907.53415860343	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	275	1516	60.0	-27	True	AATAAA	-19
PB.7875.1	chr22	-	2164	10	full-splice_match	ALG12	ENST00000330817.10	5350	10	144	3042	144	379	multi-exon	FALSE	canonical	1	144973	junction_9	54681.96515000779	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	131	1597	70.0	11	True	GATAAA	-23
PB.3033.5	chr12	+	2308	5	novel_in_catalog	ZNF140	novel	3550	5	NA	NA	-34	-3	no_combination_of_known_junctions	FALSE	canonical	1	15656	junction_1	36126.77723655959	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	161	1534	20.0	-13	True	AATAAA	-17
PB.9443.13	chr5	-	2080	10	full-splice_match	SEPT8	ENST00000296873.11	4394	10	171	2143	-2	0	multi-exon	FALSE	canonical	1	135973	junction_9	257193.2184667472	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	114	1403	15.0	-12	True	AATAAA	-15
PB.9443.12	chr5	-	4045	9	incomplete-splice_match	SEPT8	ENST00000378721.8	1723	10	-6	3965	4	0	3prime_fragment	FALSE	canonical	1	135973	junction_8	277956.7049719423	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	108	1391	15.0	-6	True	AATAAA	-15
PB.2176.1	chr11	+	2448	1	full-splice_match	GVQW3	ENST00000530460.1	2462	1	14	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	210	633	500	1132	80.0	7	True	NA	NA
PB.8792.9	chr4	+	1644	9	full-splice_match	PAICS	ENST00000512576.2	6480	9	105	4731	105	349	multi-exon	FALSE	canonical	1	261279	junction_6	436555.357549518	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	57	1334	35.0	-3	True	ATTAAA	-21
PB.3033.6	chr12	+	2474	5	full-splice_match	ZNF140	ENST00000355557.6	3550	5	1058	18	14	0	multi-exon	FALSE	canonical	1	62493	junction_4	17908.924470428145	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	226	1599	50.0	-36	True	AATAAA	-25
PB.9443.14	chr5	-	2217	10	novel_in_catalog	SEPT8	novel	2889	10	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	1	135973	junction_9	284362.7255405312	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	258	1541	15.0	16	True	AATAAA	-14
PB.3528.11	chr14	+	1493	8	full-splice_match	SRSF5	ENST00000557154.5	1500	8	17	-10	-16	-3	multi-exon	FALSE	canonical	1	2160182	junction_1	1119049.2999835317	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	135	953	10.0	-1	True	AATAAA	-11
PB.3528.10	chr14	+	1621	8	full-splice_match	SRSF5	ENST00000394366.6	1638	8	47	-30	16	-1	multi-exon	FALSE	canonical	1	544887	junction_1	1536627.314688402	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	261	1079	5.0	-2	True	AATAAA	-13
PB.3528.13	chr14	+	2996	6	full-splice_match	SRSF5	ENST00000554465.5	3044	6	48	0	-16	0	multi-exon	FALSE	canonical	1	2160182	junction_1	1179197.199616315	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	2016	2453	5.0	-1	True	AATAAA	-14
PB.3033.7	chr12	+	2586	7	novel_not_in_catalog	ZNF140	novel	3550	5	NA	NA	-4	-3	any annotated donor/acceptor	FALSE	canonical	1	129	junction_4	37791.27385462887	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	748	1812	20.0	-61	False	AATAAA	-17
PB.3528.15	chr14	+	2242	8	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-16	15	intron_retention	FALSE	canonical	1	49004	junction_5	1980961.8855226233	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	1597	2034	10.0	-1	True	ATTAAA	-15
PB.3528.14	chr14	+	2671	6	full-splice_match	SRSF5	ENST00000554465.5	3044	6	48	325	-16	25	multi-exon	FALSE	canonical	1	2160182	junction_1	1179197.199616315	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	2016	2453	25.0	-1	True	ATTAAA	-25
PB.3528.17	chr14	+	3996	4	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	15	intron_retention	FALSE	canonical	1	3760735	junction_3	769530.8489948058	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	1016	1339	10.0	0	True	ATTAAA	-15
PB.3528.16	chr14	+	1162	8	full-splice_match	SRSF5	ENST00000557154.5	1500	8	18	320	-15	17	multi-exon	FALSE	canonical	1	2160182	junction_1	1119049.2999835317	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	134	952	15.0	0	True	ATTAAA	-17
PB.3528.19	chr14	+	3566	4	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	-6	intron_retention	FALSE	canonical	1	2160182	junction_1	1411333.4490347144	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-8
PB.3528.18	chr14	+	3586	6	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	-6	intron_retention	FALSE	canonical	1	3760735	junction_5	722206.8490856618	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	2612	3049	25.0	0	True	AATAAA	-8
PB.565.9	chr1	-	2417	11	full-splice_match	DBT	ENST00000370132.8	10799	11	-19	8401	-19	-8401	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	34	1482	25.0	-1	True	ATTAAA	-19
PB.6653.16	chr2	+	2182	14	incomplete-splice_match	EIF5B	ENST00000617677.1	4698	25	41646	492	-10590	-1	5prime_fragment	FALSE	canonical	1	606372	junction_2	130421.10219624291	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	210	1823	30.0	NA	False	ATTAAA	-21
PB.325.2	chr1	+	1997	5	novel_not_in_catalog	ZFP69B	novel	2382	5	NA	NA	27	0	any annotated donor/acceptor	FALSE	canonical	1	11968	junction_3	16637.676745868095	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	779	1870	30.0	70	True	NA	NA
PB.325.1	chr1	+	2101	6	full-splice_match	ZFP69B	ENST00000411995.6	2109	6	7	1	7	1	multi-exon	FALSE	canonical	1	17064	junction_2	13935.20990010556	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	369	1973	25.0	50	True	NA	NA
PB.10999.47	chr8	+	3143	20	novel_in_catalog	PCM1	novel	6820	39	NA	NA	3043	0	combination_of_known_junctions	FALSE	canonical	1	198012	junction_5	239901.88714739383	NA	7	1	TRUE	NA	NA	NA	C	coding	992	2979	80	3058	50.0	-1060	False	AATAAA	-15
PB.8792.8	chr4	+	3087	9	full-splice_match	PAICS	ENST00000512576.2	6480	9	119	3274	119	-56	multi-exon	FALSE	canonical	1	261279	junction_6	436555.357549518	NA	3	NA	TRUE	NA	NA	NA	C	coding	425	1278	43	1320	30.0	11	True	AGTAAA	-24
PB.4846.9	chr17	-	2307	12	novel_not_in_catalog	POLDIP2	novel	2121	11	NA	NA	-63	-5	any annotated donor/acceptor	FALSE	canonical	1	1876	junction_3	538377.162291724	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	138	1523	10.0	-1	True	ATTAAA	-17
PB.4846.8	chr17	-	2992	10	novel_in_catalog	POLDIP2	novel	2121	11	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	851706	junction_9	243554.64754347163	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	80	991	10.0	9903	False	ATTAAA	-17
PB.4846.5	chr17	-	2675	9	novel_in_catalog	POLDIP2	novel	2121	11	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	851706	junction_8	243277.84953574045	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	32	847	10.0	1	True	ATTAAA	-20
PB.4846.4	chr17	-	2397	11	full-splice_match	POLDIP2	ENST00000540200.5	2121	11	-4	-272	-4	272	multi-exon	FALSE	canonical	1	851706	junction_10	244690.96006328065	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	79	1185	20.0	9904	False	GATAAA	-21
PB.4846.7	chr17	-	3054	11	novel_not_in_catalog	POLDIP2	novel	2121	11	NA	NA	3	-5	any annotated donor/acceptor	FALSE	canonical	1	24275	junction_2	446501.7900612381	NA	3	NA	TRUE	NA	NA	NA	C	coding	338	1017	72	1088	10.0	-39	True	ATTAAA	-17
PB.4846.6	chr17	-	2076	11	full-splice_match	POLDIP2	ENST00000540200.5	2121	11	42	3	-17	-3	multi-exon	FALSE	canonical	1	851706	junction_10	244690.96006328065	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	33	1139	10.0	0	True	ATTAAA	-19
PB.5063.20	chr17	+	1840	6	full-splice_match	GOSR2	ENST00000638216.1	3574	6	29	1705	3	-58	multi-exon	FALSE	canonical	1	23065	junction_1	196486.07202791754	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	121	705	30.0	15	False	NA	NA
PB.6851.9	chr2	-	4100	14	novel_in_catalog	ATF2	novel	4176	14	NA	NA	9	-2	intron_retention	FALSE	canonical	1	8457	junction_11	157841.95121095926	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	415	1743	15.0	5	True	AATAAA	-24
PB.4846.3	chr17	-	2482	11	full-splice_match	POLDIP2	ENST00000540200.5	2121	11	-13	-348	-13	348	multi-exon	FALSE	canonical	1	851706	junction_10	244690.96006328065	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	88	1194	25.0	9895	False	AATAAA	-24
PB.4846.2	chr17	-	2665	11	full-splice_match	POLDIP2	ENST00000540200.5	2121	11	1	-545	1	545	multi-exon	FALSE	canonical	1	851706	junction_10	244690.96006328065	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	74	1180	25.0	9909	False	ATTAAA	-15
PB.8220.14	chr3	-	1921	5	incomplete-splice_match	TMF1	ENST00000488010.5	3399	16	-39	19736	4	979	3prime_fragment	FALSE	canonical	1	257124	junction_4	39634.45308377549	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1677	244	1920	35.0	3	True	NA	NA
PB.5613.2	chr19	+	1578	10	full-splice_match	HMG20B	ENST00000333651.10	1596	10	11	7	1	-2	multi-exon	FALSE	canonical	1	319717	junction_1	407094.648308392	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	65	1018	25.0	5	True	AATAAA	-22
PB.7688.9	chr22	-	2397	22	novel_not_in_catalog	THOC5	novel	4753	20	NA	NA	5	-1	intron_retention	FALSE	canonical	1	5247	junction_21	149709.65949865032	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	186	2270	10.0	-28	True	ATTAAA	-13
PB.6882.10	chr2	+	4781	18	novel_in_catalog	ITPRID2	novel	2526	2	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	1506	junction_1	186096.42286698925	NA	2	NA	TRUE	NA	NA	NA	C	coding	1106	3321	273	3593	20.0	-7889	False	AATAAA	-16
PB.7688.4	chr22	-	2667	21	full-splice_match	THOC5	ENST00000397872.5	2676	21	-22	31	3	-31	multi-exon	FALSE	canonical	1	23401	junction_20	119990.23641174936	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	358	2409	45.0	-3	True	AATAAA	-11
PB.7688.5	chr22	-	2402	21	novel_in_catalog	THOC5	novel	4753	20	NA	NA	23	-31	intron_retention	FALSE	canonical	1	65810	junction_12	128703.65069612439	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	60	2144	45.0	-10	True	AATAAA	-11
PB.7688.6	chr22	-	2546	21	full-splice_match	THOC5	ENST00000397872.5	2676	21	-32	162	-7	-1	multi-exon	FALSE	canonical	1	23401	junction_20	119990.23641174936	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	368	2419	10.0	7482	False	ATTAAA	-13
PB.7688.7	chr22	-	2514	21	novel_not_in_catalog	THOC5	novel	4753	20	NA	NA	7	-1	intron_retention	FALSE	canonical	1	5247	junction_20	144573.22223471227	NA	1	1	TRUE	NA	NA	NA	C	coding	354	1065	184	1248	10.0	-26	True	ATTAAA	-13
PB.7688.1	chr22	-	3377	21	novel_not_in_catalog	THOC5	novel	4753	20	NA	NA	-11	6919	intron_retention	FALSE	non_canonical	0	0	junction_1	121700.49926865543	NA	2	NA	TRUE	NA	NA	NA	C	coding	683	2052	135	2186	75.0	7376	False	NA	NA
PB.7688.2	chr22	-	2524	21	full-splice_match	THOC5	ENST00000397873.6	2374	21	9	-159	9	-31	multi-exon	FALSE	canonical	1	102437	junction_20	108853.91042166331	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	215	2266	45.0	-49	True	AATAAA	-11
PB.7688.3	chr22	-	2412	20	full-splice_match	THOC5	ENST00000490103.5	4753	20	21	2320	5	-31	multi-exon	FALSE	canonical	1	186424	junction_19	86315.0694493717	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	103	2154	45.0	-53	True	AATAAA	-11
PB.2003.2	chr11	-	2784	2	full-splice_match	ZBTB3	ENST00000527994.1	432	2	1	-2353	1	-2	multi-exon	FALSE	canonical	1	2026	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	524	1575	85	1659	10.0	1	True	CATAAA	-25
PB.2003.1	chr11	-	2958	2	full-splice_match	ZBTB3	ENST00000394807.3	2978	2	18	2	-11	-2	multi-exon	FALSE	canonical	1	27141	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	259	1833	10.0	-11	True	CATAAA	-25
PB.10932.13	chr7	-	2046	10	novel_in_catalog	FASTK	novel	1609	9	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	1	134422	junction_9	219181.10762129741	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	401	1948	15.0	-16	True	ATTAAA	-13
PB.10932.12	chr7	-	2200	10	novel_in_catalog	FASTK	novel	1609	9	NA	NA	6	-1	no_combination_of_known_junctions	FALSE	canonical	1	64443	junction_7	312459.6421837231	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	636	2102	15.0	8677	False	ATTAAA	-13
PB.10932.11	chr7	-	2270	10	novel_in_catalog	FASTK	novel	1609	9	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	65899	junction_9	239245.9718638158	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	624	2171	15.0	-11	True	ATTAAA	-14
PB.10932.10	chr7	-	2776	8	novel_in_catalog	FASTK	novel	1609	9	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	653770	junction_2	94092.48515721766	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	910	2115	15.0	-11	True	ATTAAA	-15
PB.9503.6	chr5	+	3145	11	novel_in_catalog	HARS2	novel	2510	13	NA	NA	1	2	intron_retention	FALSE	canonical	1	17113	junction_1	116337.6094346106	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	1602	2390	20.0	-2	True	AATAAA	-15
PB.1174.2	chr1	-	2427	6	full-splice_match	JMJD4	ENST00000620518.4	2432	6	-6	11	-6	-1	multi-exon	FALSE	canonical	1	220923	junction_2	52870.066800033455	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	17	1270	15.0	-7	True	NA	NA
PB.2380.2	chr11	+	1624	11	novel_in_catalog	ACAD8	novel	2249	11	NA	NA	15	149	combination_of_known_junctions	FALSE	canonical	1	19742	junction_10	96210.82586117843	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	92	1396	25.0	-1666	False	AATAAA	-22
PB.2380.3	chr11	+	3668	11	novel_in_catalog	ACAD8	novel	2249	11	NA	NA	19	0	intron_retention	FALSE	canonical	1	11409	junction_9	113389.36510224405	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	88	894	45.0	-1662	False	AATAAA	-23
PB.5613.3	chr19	+	2429	8	full-splice_match	HMG20B	ENST00000488973.6	2434	8	-2	7	0	-2	multi-exon	FALSE	canonical	1	448978	junction_1	333508.13499474566	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	1222	1869	25.0	33	True	AATAAA	-22
PB.2380.1	chr11	+	2602	10	incomplete-splice_match	ACAD8	ENST00000281182.8	2249	11	13	1919	13	-125	3prime_fragment	FALSE	canonical	1	127494	junction_1	71660.36048292814	NA	4	NA	TRUE	NA	NA	NA	C	coding	483	1452	94	1545	60.0	-1668	False	ATTAAA	-11
PB.2380.6	chr11	+	2409	12	novel_not_in_catalog	ACAD8	novel	2249	11	NA	NA	3	1	any annotated donor/acceptor	FALSE	canonical	1	7576	junction_10	110370.11683706826	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	51	1406	40.0	-17	True	AATAAA	-24
PB.2380.7	chr11	+	3415	12	novel_not_in_catalog	ACAD8	novel	2249	11	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	7576	junction_10	122377.25898775218	NA	2	1	TRUE	NA	NA	NA	C	coding	249	750	43	792	45.0	-9	True	AATAAA	-23
PB.2380.4	chr11	+	3211	11	novel_in_catalog	ACAD8	novel	2249	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	21015	junction_6	95928.77550083707	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	60	809	45.0	-26	True	AATAAA	-22
PB.4357.1	chr16	+	2032	1	novel_in_catalog	INO80E	novel	2103	7	NA	NA	7	-1278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	120	363	1	363	95.0	9	True	NA	NA
PB.969.4	chr1	+	2892	15	full-splice_match	XPR1	ENST00000367590.8	8474	15	8	5574	8	-1449	multi-exon	FALSE	canonical	1	188467	junction_7	36179.713793838695	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	191	2281	25.0	-10	True	NA	NA
PB.969.5	chr1	+	4574	15	full-splice_match	XPR1	ENST00000367590.8	8474	15	13	3887	13	238	multi-exon	FALSE	canonical	1	188467	junction_7	36179.713793838695	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	186	2276	25.0	-5	True	AATAAA	-41
PB.2380.8	chr11	+	2172	11	full-splice_match	ACAD8	ENST00000281182.8	2249	11	73	4	0	1	multi-exon	FALSE	canonical	1	127494	junction_1	68000.19425119314	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	34	1281	40.0	0	True	AATAAA	-24
PB.2380.9	chr11	+	2010	10	novel_in_catalog	ACAD8	novel	2249	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24711	junction_2	98139.5678522288	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	254	1120	45.0	-9	True	AATAAA	-23
PB.10158.11	chr6	+	3204	7	novel_in_catalog	AMD1	novel	3438	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2831	junction_1	571774.6441314678	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	459	1112	20.0	0	True	AATAAA	-24
PB.969.2	chr1	+	2607	6	incomplete-splice_match	XPR1	ENST00000367589.3	4126	14	-26	77839	2	-65768	3prime_fragment	FALSE	canonical	1	192354	junction_4	41209.48476552455	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	197	898	80.0	-16	True	NA	NA
PB.6386.5	chr2	-	2637	6	full-splice_match	SUPT7L	ENST00000337768.9	4488	6	394	1457	224	783	multi-exon	FALSE	canonical	1	230450	junction_4	108694.82624301857	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	177	1421	40.0	408	False	NA	NA
PB.2996.1	chr12	-	2764	1	incomplete-splice_match	SBNO1	ENST00000420886.6	10981	31	56750	1819	56750	-1819	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	941	False	NA	NA
PB.8392.3	chr3	-	2484	8	full-splice_match	MBD4	ENST00000249910.5	2470	8	-20	6	0	-4	multi-exon	FALSE	canonical	1	129666	junction_5	152071.81020887493	NA	2	NA	TRUE	NA	NA	NA	C	coding	580	1743	197	1939	50.0	-1	True	NA	NA
PB.8392.2	chr3	-	3279	7	novel_in_catalog	MBD4	novel	2478	8	NA	NA	9	-4	intron_retention	FALSE	canonical	1	319863	junction_4	105402.35023787024	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	86	1786	50.0	110	False	NA	NA
PB.8392.5	chr3	-	4081	4	novel_in_catalog	MBD4	novel	2478	8	NA	NA	-8	-8	intron_retention	FALSE	canonical	1	319863	junction_2	118991.13827788465	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	1004	1843	45.0	-9	True	AATAAA	-21
PB.8392.4	chr3	-	2977	7	full-splice_match	MBD4	ENST00000507208.1	2194	7	119	-902	11	-8	multi-exon	FALSE	canonical	1	129666	junction_4	159777.91257841827	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	84	1802	45.0	-22	True	AATAAA	-21
PB.8392.7	chr3	-	2038	8	full-splice_match	MBD4	ENST00000429544.6	2478	8	110	330	8	-8	multi-exon	FALSE	canonical	1	319863	junction_5	108036.49792509181	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	87	1811	45.0	109	False	AATAAA	-21
PB.8392.6	chr3	-	2948	7	novel_in_catalog	MBD4	novel	2478	8	NA	NA	14	-16	intron_retention	FALSE	canonical	1	319863	junction_4	105402.35023787024	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	81	1781	65.0	-19	True	AATAAA	-13
PB.9503.7	chr5	+	2887	11	novel_in_catalog	HARS2	novel	2510	13	NA	NA	0	2	intron_retention	FALSE	canonical	1	202966	junction_1	76558.49239431247	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	1344	2132	20.0	0	True	AATAAA	-15
PB.8392.8	chr3	-	2022	8	full-splice_match	MBD4	ENST00000249910.5	2470	8	124	324	42	-8	multi-exon	FALSE	canonical	1	129666	junction_5	152071.81020887493	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	53	1795	45.0	9	True	AATAAA	-21
PB.467.16	chr1	-	4316	4	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1456	-126	any annotated donor/acceptor	FALSE	canonical	1	29156	junction_3	295486.92491922923	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-6	True	AATAAA	-19
PB.6851.6	chr2	-	4205	15	full-splice_match	ATF2	ENST00000392544.5	1919	15	-33	-2253	1	-2	multi-exon	FALSE	canonical	1	8457	junction_12	145352.74254118805	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	331	1848	15.0	-3	True	AATAAA	-24
PB.2887.2	chr12	-	1140	9	full-splice_match	MMAB	ENST00000545712.6	4438	9	337	2961	-23	-1	multi-exon	FALSE	canonical	1	336868	junction_8	90290.75411474518	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	58	810	5.0	15	False	AATAAA	-16
PB.2887.3	chr12	-	3062	8	novel_in_catalog	MMAB	novel	4438	9	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	336868	junction_7	74832.50838604129	NA	2	NA	TRUE	NA	NA	NA	C	coding	256	771	21	791	5.0	-11	True	AATAAA	-16
PB.2887.1	chr12	-	2358	9	full-splice_match	MMAB	ENST00000545712.6	4438	9	343	1737	-17	1223	multi-exon	FALSE	canonical	1	336868	junction_8	90290.75411474518	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	52	804	100.0	21	False	NA	NA
PB.6851.4	chr2	-	3990	13	full-splice_match	ATF2	ENST00000345739.9	4079	13	82	7	20	-3	multi-exon	FALSE	canonical	1	128401	junction_9	98023.04596751725	NA	6	1	TRUE	NA	NA	NA	C	coding	442	1329	310	1638	15.0	75	True	AATAAA	-19
PB.7040.10	chr2	-	2156	5	full-splice_match	AP1S3	ENST00000396654.6	830	5	-16	-1310	4	-182	multi-exon	FALSE	canonical	1	62641	junction_4	19725.100410073963	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	149	613	70.0	-17	True	NA	NA
PB.11595.10	chr9	-	4394	7	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-76	2940	no_combination_of_known_junctions	FALSE	canonical	1	18160	junction_6	63222.02447371925	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	468	1133	30.0	4	True	ATTAAA	-32
PB.9503.4	chr5	+	2329	13	full-splice_match	HARS2	ENST00000642231.1	2465	13	147	-11	-4	-2	multi-exon	FALSE	canonical	1	202966	junction_1	72167.11871081479	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	45	1565	30.0	-9	True	AATAAA	-24
PB.6063.3	chr19	-	3065	5	full-splice_match	ZNF180	ENST00000592529.5	3048	5	-16	-1	-15	1	multi-exon	FALSE	canonical	1	24175	junction_4	19091.209683713078	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	309	2306	60.0	0	True	AGTAAA	-16
PB.5613.1	chr19	+	2169	9	novel_in_catalog	HMG20B	novel	711	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	319717	junction_1	408979.3753898233	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	956	1603	15.0	2	True	AATAAA	-28
PB.10999.43	chr8	+	1690	11	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-1501	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	173916.47428754414	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1659	30	1688	60.0	7029	False	GATAAA	-12
PB.4774.1	chr17	-	2246	7	novel_not_in_catalog	SCO1	novel	9612	6	NA	NA	0	2934	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	183134.67311008828	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	21	926	85.0	4	True	NA	NA
PB.4774.3	chr17	-	1720	6	full-splice_match	SCO1	ENST00000255390.9	9612	6	30	7862	4	18	multi-exon	FALSE	canonical	1	280715	junction_5	104328.60389174198	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	32	937	25.0	-7	True	AGTAAA	-23
PB.4774.2	chr17	-	3176	6	full-splice_match	SCO1	ENST00000255390.9	9612	6	30	6406	4	170	multi-exon	FALSE	canonical	1	280715	junction_5	104328.60389174198	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	32	937	90.0	-7	True	NA	NA
PB.1529.2	chr10	-	2952	7	full-splice_match	PANK1	ENST00000307534.8	6976	7	532	3492	532	-1	multi-exon	FALSE	canonical	1	60243	junction_6	21014.778085908973	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	150	1535	20.0	-22	True	AATAAA	-17
PB.11516.2	chr9	-	3742	17	full-splice_match	VCP	ENST00000358901.10	4370	17	624	4	2	-4	multi-exon	FALSE	canonical	1	1397368	junction_16	597930.3595088926	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	273	2693	40.0	-1	True	ATTAAA	-24
PB.1529.1	chr10	-	2805	6	novel_in_catalog	PANK1	novel	6976	7	NA	NA	506	3	combination_of_known_junctions	FALSE	canonical	1	6493	junction_3	38821.63805611505	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	176	1384	20.0	148	False	AATAAA	-21
PB.8903.1	chr4	-	3274	17	full-splice_match	MANBA	ENST00000647097.1	3256	17	-19	1	4	-1	multi-exon	FALSE	canonical	1	125701	junction_16	47008.16133392258	NA	14	NA	TRUE	NA	NA	NA	C	coding	879	2640	75	2714	30.0	25	False	AATAAA	-20
PB.8587.13	chr3	+	5185	4	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	2307510	junction_1	810006.9910259348	NA	15	NA	TRUE	NA	NA	NA	C	coding	102	309	2753	3061	20.0	-1	True	AATAAA	-16
PB.12169.1	chrX	-	2255	1	antisense	novelGene_APOOL_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.8903.3	chr4	-	2365	11	novel_not_in_catalog	MANBA	novel	4238	18	NA	NA	35437	0	any annotated donor/acceptor	FALSE	canonical	1	982	junction_10	77319.32621149773	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	314	1804	25.0	-2727	False	AATAAA	-21
PB.983.1	chr1	+	2324	1	antisense	novelGene_ARPC5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11135.1	chr8	+	3251	2	novel_not_in_catalog	XKR4	novel	19880	3	NA	NA	16966	-403302	any annotated donor/acceptor	FALSE	canonical	1	70	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-2480	False	ATTAAA	-14
PB.8903.2	chr4	-	3510	18	novel_not_in_catalog	MANBA	novel	4238	18	NA	NA	2	-2	any annotated donor/acceptor	TRUE	canonical	1	2144	junction_1	78304.37184774927	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2724	77	2800	20.0	23	False	AATAAA	-27
PB.975.2	chr1	-	2899	7	full-splice_match	GLUL	ENST00000331872.10	4364	7	271	1194	-143	-4	multi-exon	FALSE	canonical	1	1720479	junction_6	1486407.6785337192	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	271	1392	20.0	33	True	TATAAA	-13
PB.975.1	chr1	-	2818	7	full-splice_match	GLUL	ENST00000417584.6	4065	7	61	1186	3	3	multi-exon	FALSE	canonical	1	132546	junction_6	1820471.8679145388	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	183	1304	10.0	-3	True	TATAAA	-20
PB.11078.8	chr8	+	1776	12	incomplete-splice_match	WRN	ENST00000298139.5	5215	35	7	85891	7	-37087	3prime_fragment	FALSE	canonical	1	80082	junction_5	20236.027755523413	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1533	243	1775	55.0	-29	True	AAGAAA	-36
PB.2112.1	chr11	-	1440	4	full-splice_match	CDK2AP2	ENST00000301488.7	1378	4	-64	2	-46	-2	multi-exon	FALSE	canonical	1	523014	junction_1	174316.91769940814	NA	0	NA	TRUE	NA	NA	NA	A	coding	126	381	614	994	10.0	-54	True	AATAAA	-23
PB.565.7	chr1	-	3363	11	full-splice_match	DBT	ENST00000370132.8	10799	11	1	7435	1	-7435	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	14	1462	90.0	0	True	NA	NA
PB.10449.38	chr7	-	2747	10	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-8	intron_retention	FALSE	canonical	1	135089	junction_3	5821924.881390843	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	170	1075	50.0	-1	True	AATAAA	-19
PB.10449.39	chr7	-	2023	12	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	78658	junction_2	5280191.621765108	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	50.0	-1	True	AATAAA	-19
PB.6352.5	chr2	+	3982	7	novel_in_catalog	CENPO	novel	459	4	NA	NA	-7	1	intron_retention	FALSE	canonical	1	26183	junction_1	66616.00308734631	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	1014	1328	5.0	29	True	AATAAA	-20
PB.717.10	chr1	+	2988	14	incomplete-splice_match	VPS45	ENST00000643970.1	2315	15	508	-158	11	-5	5prime_fragment	FALSE	canonical	1	221556	junction_2	65435.663771787615	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	859	2463	40.0	0	True	AATAAA	-14
PB.717.12	chr1	+	2335	15	full-splice_match	VPS45	ENST00000642919.1	2192	15	-26	-117	11	0	multi-exon	FALSE	canonical	1	13229	junction_1	102563.80946764462	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	200	1804	25.0	0	True	AATAAA	-20
PB.1452.1	chr10	+	4602	20	full-splice_match	PALD1	ENST00000263563.6	4555	20	-42	-5	-42	5	multi-exon	TRUE	canonical	1	32975	junction_1	17137.145788884267	NA	2	NA	TRUE	NA	NA	NA	A	coding	856	2571	311	2881	20.0	-38	True	ATTAAA	-20
PB.10449.31	chr7	-	1764	13	full-splice_match	HNRNPA2B1	ENST00000360787.8	1724	13	-43	3	4	-3	multi-exon	FALSE	canonical	1	661144	junction_2	5840145.201260072	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	213	1274	30.0	831	False	AATAAA	-15
PB.10449.32	chr7	-	1685	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	661144	junction_2	5181242.849660966	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	30.0	-1	True	AATAAA	-15
PB.10449.33	chr7	-	2872	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	1172921	junction_1	4425233.435110509	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	172	1197	35.0	-3	True	AATAAA	-22
PB.10449.34	chr7	-	1527	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	1	661144	junction_2	5181242.849660966	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	196	1221	50.0	2	True	AATAAA	-19
PB.10449.35	chr7	-	3410	10	incomplete-splice_match	HNRNPA2B1	ENST00000608362.2	3497	11	544	17255	-11	-8	3prime_fragment	FALSE	canonical	1	6843184	junction_9	3088624.0211955947	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	181	1206	50.0	863	False	AATAAA	-19
PB.10449.36	chr7	-	3435	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-8	intron_retention	FALSE	canonical	1	1623379	junction_10	5002701.188289551	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	170	1231	50.0	-1	True	AATAAA	-19
PB.10449.37	chr7	-	2934	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	7	-8	intron_retention	FALSE	canonical	1	1172921	junction_1	5497539.9570136005	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	201	1262	50.0	-3	True	AATAAA	-19
PB.7111.4	chr2	-	5075	28	novel_not_in_catalog	HDLBP	novel	6372	28	NA	NA	0	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	947828.5998966269	NA	30	2	TRUE	NA	NA	NA	C	coding	1248	3747	236	3982	25.0	12	False	AATAAA	-13
PB.7111.7	chr2	-	4547	28	full-splice_match	HDLBP	ENST00000310931.8	4571	28	22	2	0	-2	multi-exon	FALSE	canonical	1	560638	junction_27	768594.6249985817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	354	4160	10.0	-106	False	AATAAA	-24
PB.3840.1	chr15	-	4006	3	novel_not_in_catalog	AC051619.6	novel	595	2	NA	NA	13	3997	intron_retention	FALSE	canonical	0	0	junction_2	159.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	19	True	NA	NA
PB.7111.1	chr2	-	6377	28	full-splice_match	HDLBP	ENST00000310931.8	4571	28	137	-1943	-3	-2	multi-exon	FALSE	canonical	1	560638	junction_27	768594.6249985817	NA	1	NA	TRUE	NA	NA	NA	C	coding	1268	3807	239	4045	5.0	9	True	AATAAA	-36
PB.9425.9	chr5	+	2070	9	novel_in_catalog	PRRC1	novel	4699	9	NA	NA	34	-138	combination_of_known_junctions	FALSE	canonical	1	12735	junction_1	153229.17586229296	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	331	1668	10.0	-5	True	ATTAAA	-43
PB.8903.8	chr4	-	3169	17	full-splice_match	MANBA	ENST00000647097.1	3256	17	-34	121	0	-28	multi-exon	FALSE	canonical	1	125701	junction_16	47008.16133392258	NA	1	NA	TRUE	NA	NA	NA	C	coding	879	2640	90	2729	35.0	-2	True	AATAAA	-25
PB.7111.8	chr2	-	4388	28	full-splice_match	HDLBP	ENST00000391975.5	6372	28	33	1951	10	-3	multi-exon	FALSE	canonical	1	545798	junction_27	770300.9714381798	NA	18	3	TRUE	NA	NA	NA	C	coding	1268	3807	196	4002	15.0	-20	False	AATAAA	-23
PB.8587.15	chr3	+	1755	11	full-splice_match	EIF4A2	ENST00000323963.9	1919	11	29	135	1	-116	multi-exon	FALSE	canonical	1	1541841	junction_10	772813.8791711753	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	36	1259	25.0	-1	True	AATAAA	-17
PB.3256.1	chr13	+	3107	3	intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1181	junction_1	390.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-7512	False	AATAAA	-17
PB.2727.7	chr12	+	3012	21	full-splice_match	TBK1	ENST00000331710.9	3256	21	246	-2	-64	2	multi-exon	FALSE	canonical	1	120569	junction_1	81566.3139466747	NA	1	NA	TRUE	NA	NA	NA	C	coding	729	2190	94	2283	25.0	-12	True	AATAAA	-17
PB.3023.2	chr12	+	2700	9	novel_in_catalog	EP400	novel	12317	53	NA	NA	-12	-8	combination_of_known_junctions	FALSE	canonical	1	37549	junction_3	55711.93437002524	NA	0	NA	TRUE	NA	NA	NA	B	coding	859	2577	122	2698	55.0	-13	True	AATAAA	-19
PB.5613.4	chr19	+	1846	9	novel_in_catalog	HMG20B	novel	711	8	NA	NA	1	-2	intron_retention	FALSE	canonical	1	448978	junction_1	355498.431229639	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	333	1286	25.0	34	True	AATAAA	-22
PB.8792.1	chr4	+	3150	9	full-splice_match	PAICS	ENST00000512576.2	6480	9	110	3220	110	-2	multi-exon	FALSE	canonical	1	261279	junction_6	436555.357549518	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	52	1329	15.0	2	True	ATTAAA	-16
PB.2727.5	chr12	+	1802	15	incomplete-splice_match	TBK1	ENST00000331710.9	3256	21	235	6355	-75	-178	3prime_fragment	FALSE	canonical	1	120569	junction_1	83834.22197630542	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1698	105	1802	65.0	-23	True	NA	NA
PB.7627.19	chr22	+	2519	13	novel_not_in_catalog	MED15	novel	590	6	NA	NA	2	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	282398.48191443307	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	59	1603	15.0	-2	True	AATAAA	-19
PB.6287.1	chr2	-	2183	1	intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-81	False	AATAAA	-10
PB.8047.1	chr3	+	2277	5	full-splice_match	FAM198A	ENST00000430121.2	3121	5	-50	894	-50	424	multi-exon	FALSE	canonical	1	7078	junction_1	6047.6726515247165	NA	0	NA	TRUE	NA	NA	NA	A	coding	575	1728	146	1873	15.0	0	True	AATAAA	-22
PB.9799.3	chr6	+	2275	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	80660.81254152709	NA	5	1	TRUE	NA	NA	NA	B	coding	305	918	362	1279	15.0	-25	True	NA	NA
PB.9115.5	chr5	+	2429	11	novel_in_catalog	PDCD6	novel	458	5	NA	NA	13525	81200	no_combination_of_known_junctions	FALSE	canonical	1	1100	junction_2	27194.114007262673	NA	1	1	TRUE	NA	NA	NA	C	coding	547	1644	564	2207	35.0	-22	True	AATGAA	-16
PB.1234.24	chr1	-	3405	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-9	-181	intron_retention	FALSE	non_canonical	0	0	junction_8	118905.71901092114	NA	0	NA	TRUE	NA	NA	NA	B	coding	1015	3045	360	3404	45.0	-1	True	AAGAAA	-9
PB.11132.8	chr8	-	2459	9	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	-9	-5	any annotated donor/acceptor	FALSE	canonical	1	25486	junction_4	74849.92451138061	NA	5	2	TRUE	NA	NA	NA	C	coding	181	546	222	767	20.0	-9	True	AATAAA	-18
PB.6160.9	chr19	+	3567	28	novel_in_catalog	POLD1	novel	3474	26	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	8894	junction_1	132150.0014776512	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	178	3501	10.0	-6	True	AATAAA	-17
PB.6160.2	chr19	+	3550	26	novel_not_in_catalog	POLD1	novel	3474	26	NA	NA	-50	0	intron_retention	FALSE	canonical	1	8964	junction_14	122639.46622125196	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	775	3483	5.0	-58	False	AATAAA	-18
PB.6160.3	chr19	+	3427	27	novel_not_in_catalog	POLD1	novel	3474	26	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	8964	junction_15	120549.51232710059	NA	2	1	TRUE	NA	NA	NA	C	coding	1099	3300	61	3360	5.0	-15	True	AATAAA	-18
PB.6160.1	chr19	+	3458	27	novel_not_in_catalog	POLD1	novel	3474	26	NA	NA	-53	-1	any annotated donor/acceptor	FALSE	canonical	1	20410	junction_8	118870.27410005117	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	1230	3392	10.0	-61	False	AATAAA	-17
PB.6160.6	chr19	+	3523	27	full-splice_match	POLD1	ENST00000613923.5	3517	27	-1	-5	0	-1	multi-exon	FALSE	canonical	1	18345	junction_14	118613.26366524532	NA	4	2	TRUE	NA	NA	NA	C	coding	1133	3402	54	3455	5.0	-8	True	AATAAA	-19
PB.6160.7	chr19	+	3373	27	novel_in_catalog	POLD1	novel	3474	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	25899	junction_17	117851.15946276241	NA	0	NA	TRUE	NA	NA	NA	C	coding	1083	3252	54	3305	5.0	-8	True	AATAAA	-19
PB.6160.4	chr19	+	3660	29	novel_in_catalog	POLD1	novel	3474	26	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	1783	junction_1	148944.78090442903	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	271	3594	10.0	-10	True	AATAAA	-17
PB.6160.5	chr19	+	4141	25	novel_not_in_catalog	POLD1	novel	3474	26	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1597	junction_2	125998.7353798351	NA	0	NA	TRUE	NA	NA	NA	C	coding	912	2739	530	3268	10.0	-9	True	AATAAA	-17
PB.6780.4	chr2	+	4641	30	incomplete-splice_match	RIF1	ENST00000444746.6	7897	36	19	11369	2	8909	3prime_fragment	FALSE	canonical	1	33839	junction_1	57784.031371528414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1499	4497	143	4639	70.0	0	True	NA	NA
PB.1234.20	chr1	-	6571	20	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-31	-4	intron_retention	FALSE	non_canonical	0	0	junction_16	141263.77757019547	NA	2	NA	TRUE	NA	NA	NA	B	coding	1584	4755	265	5019	75.0	-9	True	AAAACA	-30
PB.7018.1	chr2	-	2667	1	intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	AATAGA	-41
PB.574.1	chr1	+	2884	2	full-splice_match	S1PR1	ENST00000475821.2	825	2	-65	-1994	-65	-5	multi-exon	FALSE	canonical	1	22288	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	356	1504	35.0	5	True	AATAAA	-12
PB.11290.7	chr8	-	2697	8	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	-25	-328	any annotated donor/acceptor	FALSE	canonical	1	18406	junction_7	149420.4973515197	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	698	1249	35.0	-23	True	AATAAA	-19
PB.3509.10	chr14	+	4128	8	novel_not_in_catalog	EIF2S1	novel	4485	8	NA	NA	-21	-1	any annotated donor/acceptor	FALSE	canonical	1	3032	junction_4	503463.15997523087	NA	5	NA	TRUE	NA	NA	NA	C	coding	308	927	127	1053	30.0	-21	True	NA	NA
PB.3509.11	chr14	+	4192	9	novel_not_in_catalog	EIF2S1	novel	4485	8	NA	NA	3	-7	any annotated donor/acceptor	FALSE	canonical	1	5092	junction_5	570836.4177345244	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	473	1123	45.0	3	True	NA	NA
PB.962.16	chr1	+	3467	16	novel_in_catalog	SOAT1	novel	6861	15	NA	NA	-47	-3359	combination_of_known_junctions	FALSE	canonical	1	1735	junction_1	110901.07680058337	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	138	1790	40.0	-1730	False	ATTAAA	-23
PB.4576.1	chr16	+	1862	4	novel_not_in_catalog	HSBP1	novel	8784	4	NA	NA	-30	1334	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1275620.8009233084	NA	1	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	11	True	NA	NA
PB.962.15	chr1	+	2694	16	novel_in_catalog	SOAT1	novel	6861	15	NA	NA	-20	-4105	combination_of_known_junctions	FALSE	canonical	1	1735	junction_1	110901.07680058337	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	111	1763	30.0	-1703	False	AATAAA	-14
PB.4909.20	chr17	-	2898	5	incomplete-splice_match	SLFN11	ENST00000394566.5	5030	7	-2	8513	0	1201	3prime_fragment	FALSE	canonical	1	6437	junction_4	48562.62481837241	NA	3	NA	TRUE	NA	NA	NA	C	coding	415	1248	276	1523	75.0	-2	True	NA	NA
PB.2274.2	chr11	+	4121	15	full-splice_match	SIK2	ENST00000304987.3	9678	15	26	5531	26	4648	multi-exon	TRUE	canonical	1	137634	junction_4	27843.298340068864	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	148	2928	40.0	-36	True	NA	NA
PB.2274.3	chr11	+	4233	15	full-splice_match	SIK2	ENST00000304987.3	9678	15	27	5418	27	4761	multi-exon	FALSE	canonical	1	137634	junction_4	27843.298340068864	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	147	2927	40.0	-35	True	AATAAA	-19
PB.2274.1	chr11	+	4568	1	genic	SIK2	novel	NA	NA	NA	NA	-8	-113724	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	101	306	182	487	90.0	0	True	NA	NA
PB.2274.6	chr11	+	4847	15	full-splice_match	SIK2	ENST00000304987.3	9678	15	40	4791	40	-4791	multi-exon	FALSE	canonical	1	137634	junction_4	27843.298340068864	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	134	2914	30.0	-22	True	AATAAA	-29
PB.2274.7	chr11	+	4145	16	novel_not_in_catalog	SIK2	novel	9678	15	NA	NA	63	-4798	any annotated donor/acceptor	FALSE	canonical	1	5354	junction_15	50275.183090400904	NA	2	1	TRUE	NA	NA	NA	C	coding	921	2766	111	2876	30.0	1	True	AATAAA	-22
PB.2274.4	chr11	+	5370	15	full-splice_match	SIK2	ENST00000304987.3	9678	15	30	4278	30	-4278	multi-exon	FALSE	canonical	1	137634	junction_4	27843.298340068864	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	144	2924	30.0	-32	True	AATAAA	-25
PB.2274.5	chr11	+	5696	15	full-splice_match	SIK2	ENST00000304987.3	9678	15	34	3948	34	-3948	multi-exon	FALSE	canonical	1	137634	junction_4	27843.298340068864	NA	3	NA	TRUE	NA	NA	NA	C	coding	926	2781	140	2920	40.0	-28	True	NA	NA
PB.3224.2	chr13	-	3737	23	full-splice_match	DZIP1	ENST00000376829.6	3738	23	-1	2	-1	-2	multi-exon	FALSE	canonical	1	51424	junction_19	46421.09633919307	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	887	3457	25.0	1	True	CATAAA	-21
PB.11466.15	chr9	-	1849	11	novel_not_in_catalog	PSIP1	novel	3364	16	NA	NA	5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	219257.3122543693	NA	2	1	TRUE	NA	NA	NA	C	coding	360	1083	337	1419	55.0	145	False	AATAAA	-10
PB.2274.8	chr11	+	4469	13	novel_not_in_catalog	SIK2	novel	9678	15	NA	NA	-44427	-4790	any annotated donor/acceptor	FALSE	canonical	1	2005	junction_1	56806.524458756794	NA	9	1	TRUE	NA	NA	NA	C	coding	773	2322	214	2535	30.0	NA	False	AATAAA	-30
PB.3224.1	chr13	-	4577	23	full-splice_match	DZIP1	ENST00000376829.6	3738	23	-3	-836	-3	836	multi-exon	FALSE	canonical	1	51424	junction_19	46421.09633919307	NA	1	NA	TRUE	NA	NA	NA	C	coding	856	2571	889	3459	10.0	-1	True	AGTAAA	-17
PB.11466.11	chr9	-	2772	16	full-splice_match	PSIP1	ENST00000380738.8	3364	16	2	590	1	-590	multi-exon	FALSE	canonical	1	122085	junction_8	403870.8799349724	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	316	1908	60.0	166	False	NA	NA
PB.11466.12	chr9	-	2209	12	novel_not_in_catalog	PSIP1	novel	3364	16	NA	NA	-12705	-519	any annotated donor/acceptor	FALSE	canonical	1	317	junction_9	438685.76902338234	NA	1	1	TRUE	NA	NA	NA	C	coding	332	999	276	1274	30.0	-1997	False	AATAAA	-29
PB.9452.3	chr5	-	1707	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	88	7679	0	724	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	97	588	35.0	-1	True	AATAGA	-23
PB.9169.6	chr5	+	2442	18	full-splice_match	TARS	ENST00000508361.5	2481	18	16	23	3	0	multi-exon	FALSE	canonical	1	10781	junction_2	463400.09729808586	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	229	2088	80.0	-13	True	AAAAAG	-43
PB.11132.3	chr8	-	2414	8	full-splice_match	LYPLA1	ENST00000618914.4	2482	8	68	0	-21	0	multi-exon	FALSE	canonical	1	65	junction_2	86833.48215629588	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	142	717	30.0	-21	True	AATAAA	-23
PB.1537.1	chr10	-	1990	1	incomplete-splice_match	FGFBP3	ENST00000311575.5	2545	2	587	318	587	-318	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	38	117	588	704	45.0	589	False	AATAAA	-19
PB.11132.4	chr8	-	3030	10	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	15	-1	any annotated donor/acceptor	FALSE	canonical	1	1804	junction_8	89020.29213209734	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	846	1334	30.0	-74	True	AATAAA	-22
PB.962.10	chr1	+	4454	17	novel_not_in_catalog	SOAT1	novel	6861	15	NA	NA	-18	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	112848.78084957044	NA	5	NA	TRUE	NA	NA	NA	C	coding	550	1653	162	1814	25.0	-18	True	ATTAAA	-13
PB.9169.4	chr5	+	3102	19	full-splice_match	TARS	ENST00000265112.7	4314	19	195	1017	6	431	multi-exon	FALSE	canonical	1	1135506	junction_4	278677.2242202637	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	117	2288	45.0	-22	True	AATAAA	-19
PB.6555.7	chr2	+	2101	11	full-splice_match	STAMBP	ENST00000394073.5	6386	11	-1	4286	-1	76	multi-exon	FALSE	canonical	1	49521	junction_1	168552.4856074214	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	204	1478	15.0	25	True	AATAAA	-44
PB.3635.5	chr14	-	2280	8	novel_in_catalog	ASB2	novel	2842	10	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	1	14641	junction_7	45269.001859857206	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	192	1793	25.0	7	True	AATAAA	-12
PB.1696.5	chr10	+	2409	2	novel_not_in_catalog	HMX3	novel	1173	2	NA	NA	538	1661	any annotated donor/acceptor	FALSE	canonical	1	532	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	C	coding	110	333	406	738	65.0	-5901	False	NA	NA
PB.1696.4	chr10	+	2397	2	full-splice_match	HMX3	ENST00000357878.5	1173	2	79	-1303	79	1303	multi-exon	FALSE	canonical	1	23086	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	11	1084	55.0	-2	True	NA	NA
PB.1696.3	chr10	+	2646	2	novel_not_in_catalog	HMX3	novel	1173	2	NA	NA	69	1681	any annotated donor/acceptor	FALSE	canonical	1	412	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	110	333	623	955	20.0	-6370	False	ATTAAA	-18
PB.1696.2	chr10	+	2202	2	novel_not_in_catalog	HMX3	novel	1173	2	NA	NA	57	1681	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	coding	110	333	179	511	20.0	0	True	ATTAAA	-18
PB.1696.1	chr10	+	2783	2	full-splice_match	HMX3	ENST00000357878.5	1173	2	70	-1680	70	1680	multi-exon	FALSE	canonical	1	23086	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	20	1093	15.0	-6369	False	ATTAAA	-17
PB.12177.3	chrX	-	1797	8	full-splice_match	TSPAN6	ENST00000373020.8	2206	8	48	361	48	-361	multi-exon	FALSE	canonical	1	315217	junction_7	111633.8885501008	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	65	802	45.0	-8	True	AATAAA	-14
PB.11132.7	chr8	-	2525	9	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	3	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	89864.81903661952	NA	10	1	TRUE	NA	NA	NA	C	coding	162	489	345	833	20.0	3	True	AATAAA	-18
PB.8025.10	chr3	+	1751	17	incomplete-splice_match	WDR48	ENST00000302313.9	3707	19	13	4696	-2	-2	3prime_fragment	FALSE	canonical	1	247566	junction_1	35417.429297714334	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1734	16	1749	60.0	-5	True	NA	NA
PB.9169.3	chr5	+	2864	20	novel_not_in_catalog	TARS	novel	2534	20	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	6513	junction_17	557406.9574408076	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	118	2043	80.0	-23	True	AAAAAG	-43
PB.8551.1	chr3	-	2835	7	full-splice_match	KLHL6	ENST00000341319.7	6298	7	-16	3479	-16	0	multi-exon	FALSE	canonical	1	64483	junction_1	19834.522563785933	NA	2	NA	TRUE	NA	NA	NA	C	coding	610	1833	86	1918	5.0	0	True	AATAAA	-17
PB.8551.2	chr3	-	2397	7	full-splice_match	KLHL6	ENST00000341319.7	6298	7	-17	3918	-17	-439	multi-exon	FALSE	canonical	1	64483	junction_1	19834.522563785933	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	87	1919	80.0	-1	True	NA	NA
PB.9169.1	chr5	+	2594	19	full-splice_match	TARS	ENST00000265112.7	4314	19	243	1477	23	0	multi-exon	FALSE	canonical	1	1135506	junction_4	278677.2242202637	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	69	2240	80.0	0	True	AAAAAG	-43
PB.1142.4	chr1	+	3807	13	novel_in_catalog	BROX	novel	4124	13	NA	NA	13	-10	combination_of_known_junctions	FALSE	canonical	1	46945	junction_1	101695.79331625385	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	100	1335	20.0	13	True	AATAAA	-17
PB.8587.18	chr3	+	1750	10	full-splice_match	EIF4A2	ENST00000426808.5	1751	10	4	-3	1	0	multi-exon	FALSE	canonical	1	824037	junction_3	887244.0997742655	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	181	1119	10.0	-1	True	AATAAA	-22
PB.10383.24	chr7	-	1627	6	full-splice_match	ACTB	ENST00000646664.1	1812	6	0	185	0	-177	multi-exon	FALSE	canonical	1	16600346	junction_4	13046890.85976975	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	85	1212	20.0	-1	True	NA	NA
PB.10383.25	chr7	-	1292	6	full-splice_match	ACTB	ENST00000646664.1	1812	6	0	520	0	-132	multi-exon	FALSE	canonical	1	16600346	junction_4	13046890.85976975	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	85	1212	5.0	-1	True	AAAACA	-19
PB.6663.1	chr2	-	3095	7	full-splice_match	RNF149	ENST00000295317.3	2458	7	-5	-632	0	632	multi-exon	FALSE	canonical	1	342044	junction_6	86628.49981658589	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	114	1316	100.0	-12	True	NA	NA
PB.10383.20	chr7	-	1688	6	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	14503907.130211698	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	85	1056	45.0	-1	True	AATAAA	-13
PB.10383.21	chr7	-	1680	6	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	18168400.976849653	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	85	1089	40.0	-1	True	AATAAA	-12
PB.10383.22	chr7	-	1654	5	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	20252980.03940317	NA	2	1	TRUE	NA	NA	NA	C	coding	294	885	179	1063	40.0	1	True	AATAAA	-12
PB.10383.23	chr7	-	1743	7	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	17399738.864621338	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	85	1212	40.0	-1	True	AATAAA	-11
PB.1142.1	chr1	+	2839	7	novel_not_in_catalog	BROX	novel	4124	13	NA	NA	-8	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	102770.775076813	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	415	927	25.0	-19	True	AATAAA	-16
PB.5068.8	chr17	+	2929	23	full-splice_match	NPEPPS	ENST00000322157.8	4353	23	330	1094	6	65	multi-exon	FALSE	canonical	1	3529	junction_10	349074.9798032841	NA	1	NA	TRUE	NA	NA	NA	C	coding	875	2628	40	2667	25.0	-2	True	NA	NA
PB.5068.9	chr17	+	3452	23	full-splice_match	NPEPPS	ENST00000322157.8	4353	23	173	728	21	431	multi-exon	FALSE	canonical	1	3529	junction_10	349074.9798032841	NA	1	NA	TRUE	NA	NA	NA	C	coding	875	2628	197	2824	85.0	-159	False	NA	NA
PB.5068.6	chr17	+	2770	23	full-splice_match	NPEPPS	ENST00000322157.8	4353	23	132	1451	-20	-143	multi-exon	FALSE	canonical	1	3529	junction_10	349074.9798032841	NA	2	NA	TRUE	NA	NA	NA	C	coding	844	2532	238	2769	35.0	5	True	NA	NA
PB.5068.7	chr17	+	3009	24	novel_not_in_catalog	NPEPPS	novel	649	6	NA	NA	-14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	358883.41032247245	NA	1	NA	TRUE	NA	NA	NA	C	coding	875	2628	185	2812	85.0	11	True	ATTAAA	-33
PB.5068.4	chr17	+	2430	20	incomplete-splice_match	NPEPPS	ENST00000322157.8	4353	23	124	4905	-28	-58	3prime_fragment	FALSE	canonical	1	3529	junction_10	337850.477589973	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2184	246	2429	60.0	-3	True	CATAAA	-14
PB.5068.5	chr17	+	3637	22	novel_in_catalog	NPEPPS	novel	649	6	NA	NA	-23	0	intron_retention	FALSE	canonical	1	3529	junction_10	350758.5644298043	NA	3	1	TRUE	NA	NA	NA	C	coding	814	2445	241	2685	85.0	2	True	ATTAAA	-33
PB.5068.2	chr17	+	3821	24	novel_not_in_catalog	NPEPPS	novel	649	6	NA	NA	-41	1405	any annotated donor/acceptor	FALSE	canonical	1	3529	junction_10	356630.22583964304	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	259	2886	100.0	2	True	NA	NA
PB.5068.3	chr17	+	4129	22	novel_in_catalog	NPEPPS	novel	649	6	NA	NA	-37	-1	no_combination_of_known_junctions	FALSE	canonical	1	3229	junction_4	349899.1227653338	NA	3	NA	TRUE	NA	NA	NA	C	coding	839	2520	255	2774	20.0	6	True	AATAAA	-19
PB.5068.1	chr17	+	4043	23	full-splice_match	NPEPPS	ENST00000322157.8	4353	23	309	1	-15	-1	multi-exon	FALSE	canonical	1	3529	junction_10	349074.9798032841	NA	2	NA	TRUE	NA	NA	NA	C	coding	875	2628	61	2688	20.0	-23	True	AATAAA	-19
PB.5128.12	chr17	-	5150	9	full-splice_match	TRIM25	ENST00000316881.8	5734	9	-19	603	-19	-603	multi-exon	FALSE	canonical	1	275703	junction_4	82573.87628965956	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	70	1962	85.0	-10	True	NA	NA
PB.5128.11	chr17	-	5120	10	novel_not_in_catalog	TRIM25	novel	4248	13	NA	NA	-1	-602	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	143232.1517566482	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	94	1986	90.0	-34	True	NA	NA
PB.5128.10	chr17	-	5463	8	novel_in_catalog	TRIM25	novel	4248	13	NA	NA	-10	-602	intron_retention	FALSE	canonical	1	275703	junction_3	82592.61161253827	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	61	1308	90.0	-1	True	NA	NA
PB.1527.4	chr10	+	2985	2	full-splice_match	IFIT5	ENST00000371795.4	4015	2	82	948	82	-948	multi-exon	FALSE	canonical	1	158196	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	132	1580	40.0	1	True	NA	NA
PB.5128.16	chr17	-	2395	10	novel_in_catalog	TRIM25	novel	4248	13	NA	NA	-14	375	combination_of_known_junctions	FALSE	canonical	1	543	junction_1	143088.94160013524	NA	1	1	TRUE	NA	NA	NA	C	coding	630	1893	65	1957	10.0	-5	True	CATAAA	-14
PB.5128.15	chr17	-	2495	9	full-splice_match	TRIM25	ENST00000316881.8	5734	9	-47	3286	-5	388	multi-exon	FALSE	canonical	1	275703	junction_4	82573.87628965956	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	98	1990	15.0	-38	True	CATAAA	-27
PB.5128.14	chr17	-	4750	9	full-splice_match	TRIM25	ENST00000316881.8	5734	9	-14	998	-14	-998	multi-exon	FALSE	canonical	1	275703	junction_4	82573.87628965956	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	65	1957	35.0	-5	True	AATAAA	-28
PB.10620.1	chr7	+	4289	3	full-splice_match	RHBDD2	ENST00000428119.1	1274	3	-3010	-5	30	0	multi-exon	FALSE	canonical	1	840562	junction_1	38754.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	3041	3712	0.0	0	True	TATAAA	-20
PB.10620.3	chr7	+	1841	5	full-splice_match	RHBDD2	ENST00000318622.8	1878	5	37	0	32	0	multi-exon	FALSE	canonical	1	109135	junction_1	369168.6230378843	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	593	1264	0.0	2	True	TATAAA	-20
PB.10620.2	chr7	+	1722	4	full-splice_match	RHBDD2	ENST00000006777.10	1802	4	86	-6	30	1	multi-exon	FALSE	canonical	1	541525	junction_1	162349.98633473576	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	50	1144	0.0	0	True	TATAAA	-21
PB.12167.3	chrX	-	2740	9	novel_in_catalog	HDX	novel	6200	10	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	1	4276	junction_8	6073.259348107489	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	158	2056	55.0	-19	True	AATAAA	-16
PB.12167.2	chrX	-	2892	10	full-splice_match	HDX	ENST00000297977.9	6200	10	-19	3327	7	-4	multi-exon	FALSE	canonical	1	12382	junction_9	4441.387621003148	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	132	2204	45.0	-20	True	AATAAA	-20
PB.12167.1	chrX	-	6256	10	full-splice_match	HDX	ENST00000297977.9	6200	10	-62	6	-36	-2	multi-exon	FALSE	canonical	1	12382	junction_9	4441.387621003148	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	175	2247	35.0	-23	False	AATAAA	-13
PB.6328.8	chr2	-	2490	20	incomplete-splice_match	SMC6	ENST00000351948.8	5173	27	2	36508	1	2837	3prime_fragment	FALSE	canonical	1	80781	junction_19	66694.67601007326	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2280	209	2488	60.0	-24	True	AATAAA	-36
PB.7980.2	chr3	+	2709	8	full-splice_match	RARB	ENST00000330688.8	3084	8	373	2	-17	-2	multi-exon	FALSE	canonical	1	47772	junction_2	7734.749242007442	NA	2	NA	TRUE	NA	NA	NA	C	coding	448	1347	49	1395	20.0	-17	True	AATAAA	-15
PB.7980.1	chr3	+	2608	8	full-splice_match	RARB	ENST00000330688.8	3084	8	-45	521	3	-521	multi-exon	FALSE	canonical	1	47772	junction_2	7734.749242007442	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	467	1813	50.0	3	True	ATTAAA	-40
PB.6328.4	chr2	-	3590	27	full-splice_match	SMC6	ENST00000351948.8	5173	27	1	1582	0	53	multi-exon	FALSE	canonical	1	80781	junction_26	72357.33545076147	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	210	3485	45.0	-25	True	AATAAA	-26
PB.6328.5	chr2	-	2621	21	incomplete-splice_match	SMC6	ENST00000351948.8	5173	27	20	32578	-7	6767	3prime_fragment	FALSE	canonical	1	80781	junction_20	68439.44614290431	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2430	191	2620	55.0	-6	True	ATTAAA	-27
PB.6328.6	chr2	-	2710	22	incomplete-splice_match	SMC6	ENST00000448223.6	5233	28	-9	32578	-9	6767	3prime_fragment	FALSE	canonical	1	29231	junction_20	90316.48969443854	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2430	280	2709	55.0	-8	True	ATTAAA	-27
PB.6328.7	chr2	-	2541	21	incomplete-splice_match	SMC6	ENST00000448223.6	5233	28	-32	36551	-5	2794	3prime_fragment	FALSE	canonical	1	29231	junction_19	89218.88723632177	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2238	303	2540	75.0	-31	False	TTTAAA	-26
PB.6328.1	chr2	-	5081	27	full-splice_match	SMC6	ENST00000351948.8	5173	27	21	71	-6	-71	multi-exon	TRUE	canonical	1	80781	junction_26	72357.33545076147	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	190	3465	65.0	-5	True	NA	NA
PB.6328.2	chr2	-	3844	27	full-splice_match	SMC6	ENST00000351948.8	5173	27	20	1309	-7	5	multi-exon	FALSE	canonical	1	80781	junction_26	72357.33545076147	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	191	3466	15.0	-6	True	AATAAA	-20
PB.11595.12	chr9	-	4132	7	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-61	2439	intron_retention	FALSE	canonical	1	100496	junction_6	24453.38416934011	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	83	1372	30.0	-10	True	ATTAAA	-10
PB.7225.13	chr20	+	2173	13	novel_in_catalog	HM13	novel	3810	13	NA	NA	-9	13	combination_of_known_junctions	FALSE	canonical	1	10551	junction_11	745115.8843537314	NA	5	NA	TRUE	NA	NA	NA	C	coding	345	1038	64	1101	15.0	47	True	ATTAAA	-29
PB.472.11	chr1	-	3342	12	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	5	16	no_combination_of_known_junctions	FALSE	canonical	1	30030	junction_1	60110.81817363771	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	322	1776	25.0	-8	True	AATAAA	-31
PB.6269.1	chr19	+	6908	3	novel_in_catalog	AC020915.5	novel	3042	12	NA	NA	75898	14	intron_retention	FALSE	canonical	1	564859	junction_2	65205.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	188	567	1214	1780	25.0	-302	False	NA	NA
PB.6269.2	chr19	+	1645	2	full-splice_match	ERVK3-1	ENST00000434052.5	616	2	-14	-1015	-11	1015	multi-exon	FALSE	canonical	1	695270	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	432	1214	1645	60.0	-302	False	NA	NA
PB.6269.3	chr19	+	1399	4	full-splice_match	ERVK3-1	ENST00000413518.5	1469	4	58	12	0	-12	multi-exon	FALSE	canonical	1	564859	junction_3	59518.489185201004	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	202	531	15.0	0	True	NA	NA
PB.2621.1	chr12	+	2511	11	novel_in_catalog	KRT7	novel	1754	9	NA	NA	-15	56975	intron_retention	FALSE	canonical	1	50	junction_3	27835.244996406982	NA	0	NA	TRUE	NA	NA	NA	A	coding	584	1755	181	1935	25.0	25	True	AATAAA	-17
PB.7627.16	chr22	+	3347	18	full-splice_match	MED15	ENST00000263205.11	3351	18	2	2	0	0	multi-exon	FALSE	canonical	1	176575	junction_8	221145.57006987368	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	68	2434	15.0	-4	True	AATAAA	-16
PB.3125.8	chr13	-	3866	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	canonical	1	988	junction_8	283691.253652041	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	611	2470	25.0	-12	True	AATAAA	-17
PB.3125.5	chr13	-	3729	9	novel_in_catalog	ELF1	novel	3563	9	NA	NA	461	102	combination_of_known_junctions	FALSE	canonical	1	147632	junction_8	194412.30071406876	NA	2	NA	TRUE	NA	NA	NA	C	coding	619	1860	371	2230	35.0	-1	True	AATAAA	-14
PB.3125.6	chr13	-	4429	9	novel_in_catalog	ELF1	novel	3563	9	NA	NA	-352	-5	combination_of_known_junctions	FALSE	canonical	1	147632	junction_8	194412.30071406876	NA	2	NA	TRUE	NA	NA	NA	C	coding	619	1860	1184	3043	30.0	-111	False	AATAAA	-7
PB.3125.7	chr13	-	3892	11	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	canonical	1	2456	junction_10	306386.75618193747	NA	3	NA	TRUE	NA	NA	NA	C	coding	619	1860	637	2496	25.0	-12	True	AATAAA	-17
PB.3125.1	chr13	-	4823	9	novel_in_catalog	ELF1	novel	3563	9	NA	NA	54	789	combination_of_known_junctions	FALSE	canonical	1	147632	junction_8	194412.30071406876	NA	2	NA	TRUE	NA	NA	NA	C	coding	619	1860	778	2637	20.0	-3	True	NA	NA
PB.3125.2	chr13	-	4364	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-2	787	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	264230.25716154143	NA	1	1	TRUE	NA	NA	NA	C	coding	619	1860	321	2180	25.0	-1	True	NA	NA
PB.3125.3	chr13	-	3835	9	full-splice_match	ELF1	ENST00000239882.6	3566	9	-35	-234	-35	228	multi-exon	FALSE	canonical	1	290146	junction_8	156444.73086285137	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	351	2210	25.0	857	False	AATAAA	-21
PB.10821.18	chr7	+	2127	14	incomplete-splice_match	SND1	ENST00000354725.7	3476	24	155302	5	-80430	-5	5prime_fragment	FALSE	canonical	1	1258438	junction_6	343842.44969193934	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	45	1583	25.0	-2081	False	AATAAA	-29
PB.7225.12	chr20	+	3920	3	full-splice_match	HM13	ENST00000498035.5	3932	3	9	3	9	-3	multi-exon	FALSE	canonical	1	1224215	junction_1	27179.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	87	518	40.0	24	True	ATTAAA	-15
PB.11874.6	chr9	+	2788	10	novel_in_catalog	GTF3C5	novel	1999	9	NA	NA	-28	0	intron_retention	FALSE	canonical	1	421245	junction_1	166303.53930875097	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	37	1308	10.0	3	True	ATTAAA	-14
PB.11646.49	chr9	-	2239	15	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_12	523019.3879255923	NA	2	1	TRUE	NA	NA	NA	C	coding	483	1452	326	1777	45.0	-16	True	AATAAA	-12
PB.10821.10	chr7	+	2052	14	incomplete-splice_match	SND1	ENST00000354725.7	3476	24	-9	187466	-9	17192	3prime_fragment	FALSE	canonical	1	765848	junction_1	348827.6141606253	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	204	1847	10.0	5	True	AATAAA	-21
PB.10821.11	chr7	+	2683	19	novel_not_in_catalog	SND1	novel	3476	24	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	526715.1391617768	NA	4	1	TRUE	NA	NA	NA	C	coding	563	1692	445	2136	25.0	0	True	AATAAA	-32
PB.11646.41	chr9	-	6210	32	novel_in_catalog	IARS	novel	4656	34	NA	NA	1	1	intron_retention	FALSE	canonical	1	444149	junction_31	322661.0853109748	NA	1	NA	TRUE	NA	NA	NA	C	coding	1084	3255	2493	5747	40.0	1	True	AATAAA	-13
PB.9049.2	chr4	+	1756	6	full-splice_match	TMA16	ENST00000513272.5	803	6	-134	-819	72	-1	multi-exon	FALSE	canonical	1	30232	junction_4	128617.76614978196	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	9	True	AATAAA	-19
PB.11918.2	chr9	+	2812	12	novel_in_catalog	MAN1B1	novel	2769	13	NA	NA	-24	0	intron_retention	FALSE	canonical	1	366756	junction_8	93690.87549326356	NA	2	NA	TRUE	NA	NA	NA	C	coding	754	2265	40	2304	15.0	-24	True	GATAAA	-15
PB.6568.1	chr2	-	2861	12	novel_not_in_catalog	MRPL53	novel	1162	3	NA	NA	-9665	2	any annotated donor/acceptor	FALSE	canonical	1	4147	junction_3	534262.8600783119	NA	0	NA	TRUE	NA	NA	NA	A	coding	782	2349	151	2499	35.0	10	True	AATAAA	-21
PB.3139.3	chr13	+	4093	7	full-splice_match	LACC1	ENST00000325686.6	4099	7	5	1	5	0	multi-exon	FALSE	canonical	1	22384	junction_1	17216.04886355235	NA	2	1	TRUE	NA	NA	NA	C	coding	430	1293	317	1609	20.0	-66	False	NA	NA
PB.3139.2	chr13	+	4160	8	novel_not_in_catalog	LACC1	novel	4262	7	NA	NA	36	0	any annotated donor/acceptor	FALSE	canonical	1	90	junction_1	25987.525577335236	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	384	1676	20.0	21	True	NA	NA
PB.3139.1	chr13	+	3940	7	full-splice_match	LACC1	ENST00000441843.5	4262	7	321	1	47	-1	multi-exon	FALSE	canonical	1	9719	junction_1	21729.7534884008	NA	2	NA	TRUE	NA	NA	NA	C	coding	430	1293	165	1457	15.0	32	True	NA	NA
PB.11008.12	chr8	-	5187	3	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	1126	-6	intron_retention	FALSE	canonical	1	720	junction_2	20934.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	188	1636	20.0	-14	False	AATAAA	-19
PB.680.1	chr1	-	1610	4	full-splice_match	PEX11B	ENST00000369306.7	1740	4	129	1	129	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	21	800	15.0	8	True	ATTAAA	-18
PB.858.39	chr1	-	2807	1	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-4	-7208	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-4	True	NA	NA
PB.858.38	chr1	-	3281	1	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-53	-6783	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-31	False	NA	NA
PB.858.37	chr1	-	4997	1	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-21	-5035	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	1	True	NA	NA
PB.858.36	chr1	-	1847	2	full-splice_match	SLAMF1	ENST00000494463.1	671	2	-28	-1148	-28	1148	multi-exon	FALSE	canonical	1	227876	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	105	551	25.0	-6	True	NA	NA
PB.858.35	chr1	-	1925	2	full-splice_match	SLAMF1	ENST00000494463.1	671	2	-4	-1250	-4	1250	multi-exon	FALSE	canonical	1	227876	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	81	527	90.0	-4	True	NA	NA
PB.8257.45	chr3	+	2096	13	novel_not_in_catalog	ST3GAL6	novel	804	5	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	canonical	1	2966	junction_7	67246.63328416938	NA	3	NA	TRUE	NA	NA	NA	C	coding	187	564	904	1467	25.0	-2	True	NA	NA
PB.858.33	chr1	-	2096	2	full-splice_match	SLAMF1	ENST00000494463.1	671	2	-4	-1421	-4	1421	multi-exon	FALSE	canonical	1	227876	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	81	527	95.0	-4	True	NA	NA
PB.5422.22	chr18	+	2079	2	full-splice_match	RIOK3	ENST00000581220.1	2384	2	308	-3	308	0	multi-exon	FALSE	canonical	1	823699	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	NA	False	ATTAAA	-21
PB.7225.10	chr20	+	3995	7	incomplete-splice_match	HM13	ENST00000649374.1	1231	13	-97	15920	0	-1530	3prime_fragment	FALSE	canonical	1	1224215	junction_1	335213.3349468995	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	98	829	95.0	13	True	NA	NA
PB.858.30	chr1	-	2414	3	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-4	4037	any annotated donor/acceptor	FALSE	canonical	1	10869	junction_1	108503.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	493	981	55.0	-4	True	NA	NA
PB.11338.2	chr8	+	2963	3	full-splice_match	TRIB1	ENST00000311922.3	3635	3	667	5	667	-5	multi-exon	FALSE	canonical	1	406143	junction_1	82332.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	414	1034	30.0	-6387	False	AATAAA	-12
PB.27.1	chr1	-	2980	20	full-splice_match	CDK11B	ENST00000341832.10	2998	20	17	1	17	-1	multi-exon	TRUE	canonical	0	0	junction_15	267119.8292098143	NA	1	1	TRUE	NA	NA	NA	C	coding	782	2349	96	2444	10.0	-24	True	ATTAAA	-15
PB.6525.1	chr2	-	3593	1	incomplete-splice_match	AAK1	ENST00000606389.5	8964	5	47688	3	47670	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	ATTAAA	-16
PB.11338.3	chr8	+	6124	2	incomplete-splice_match	TRIB1	ENST00000311922.3	3635	3	-102	9	-102	-9	intron_retention	FALSE	canonical	1	406143	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	685	1341	30.0	0	True	AATAAA	-8
PB.12076.1	chrX	-	1665	11	full-splice_match	GPKOW	ENST00000156109.6	1742	11	67	10	67	-10	multi-exon	FALSE	canonical	1	220815	junction_8	101229.54116862331	NA	0	NA	TRUE	NA	NA	NA	A	coding	476	1431	13	1443	50.0	0	True	AATAAA	-23
PB.6973.13	chr2	+	2607	5	incomplete-splice_match	CREB1	ENST00000353267.7	7588	8	33	31206	5	448	3prime_fragment	FALSE	canonical	1	213854	junction_3	108831.38014952306	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	205	711	95.0	-17	True	NA	NA
PB.11008.13	chr8	-	2559	4	full-splice_match	LZTS1	ENST00000381569.5	5706	4	26	3121	26	436	multi-exon	FALSE	canonical	1	23792	junction_3	8725.924834779533	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	333	2123	30.0	4	True	AATAGA	-21
PB.9106.4	chr4	-	2249	9	novel_in_catalog	TRIML2	novel	1639	7	NA	NA	4	23	combination_of_known_junctions	FALSE	canonical	1	1605	junction_2	19690.19869717863	NA	1	NA	TRUE	NA	NA	NA	B	coding	261	786	577	1362	20.0	3	False	AATAAA	-36
PB.8699.8	chr4	-	4190	2	full-splice_match	ZNF518B	ENST00000503068.1	4196	2	2	4	0	-4	multi-exon	FALSE	canonical	1	44401	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	17	True	AATAAA	-25
PB.8699.3	chr4	-	6518	3	full-splice_match	ZNF518B	ENST00000326756.3	6894	3	-51	427	-1	-427	multi-exon	FALSE	canonical	1	22481	junction_1	10960.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	1074	3225	491	3715	65.0	14	True	AGTAAA	-5
PB.8699.2	chr4	-	6753	2	full-splice_match	ZNF518B	ENST00000507515.1	527	2	-32	-6194	-27	-34	multi-exon	FALSE	canonical	1	20866	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	1074	3225	333	3557	40.0	3918	False	CATAAA	-14
PB.8699.1	chr4	-	7153	3	novel_in_catalog	ZNF518B	novel	6894	3	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	23668	junction_1	10366.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	701	3925	30.0	15	True	AATAAA	-32
PB.7225.17	chr20	+	3586	8	novel_in_catalog	HM13	novel	3810	13	NA	NA	-11	-10	intron_retention	FALSE	canonical	1	86891	junction_7	915076.6403653225	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	2596	3096	15.0	-22	True	ATTAAA	-32
PB.8699.6	chr4	-	4337	3	novel_in_catalog	ZNF518B	novel	6894	3	NA	NA	-15	-2833	no_combination_of_known_junctions	FALSE	canonical	1	23668	junction_1	10366.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	716	3940	15.0	0	True	TATAAA	-18
PB.8699.5	chr4	-	3955	2	full-splice_match	ZNF518B	ENST00000507515.1	527	2	-32	-3396	-27	-2832	multi-exon	FALSE	canonical	1	20866	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	333	3557	15.0	3918	False	TATAAA	-19
PB.8699.4	chr4	-	6342	2	full-splice_match	ZNF518B	ENST00000507515.1	527	2	-21	-5794	-16	-434	multi-exon	FALSE	canonical	1	20866	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	1074	3225	322	3546	80.0	-1	True	AATACA	-3
PB.6467.49	chr2	+	1616	4	full-splice_match	SPTBN1	ENST00000467371.1	3332	4	1715	1	1715	-1	multi-exon	FALSE	canonical	1	1338064	junction_1	343920.31960357074	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	15	512	20.0	-4638	False	ATTAAA	-13
PB.6467.48	chr2	+	2899	4	full-splice_match	SPTBN1	ENST00000467371.1	3332	4	432	1	432	-1	multi-exon	FALSE	canonical	1	1338064	junction_1	343920.31960357074	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	1121	1795	20.0	-5921	False	ATTAAA	-13
PB.5742.1	chr19	-	1683	4	full-splice_match	ZNF563	ENST00000293725.9	2754	4	32	1039	32	663	multi-exon	FALSE	canonical	1	25764	junction_1	1770.1527868771354	NA	1	NA	TRUE	NA	NA	NA	A	coding	476	1431	175	1605	50.0	2	True	AATAAA	-22
PB.4021.1	chr15	+	1693	1	full-splice_match	ST20-AS1	ENST00000618735.1	490	1	394	-1597	394	1597	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-8	True	ATTAAA	-37
PB.6467.44	chr2	+	2382	9	incomplete-splice_match	SPTBN1	ENST00000356805.8	8482	36	198783	-1	2550	1	5prime_fragment	FALSE	canonical	1	1338064	junction_6	266222.8041414512	NA	3	NA	TRUE	NA	NA	NA	C	coding	415	1248	28	1275	15.0	1302	False	ATTAAA	-16
PB.3561.1	chr14	-	5430	20	full-splice_match	AREL1	ENST00000356357.8	5456	20	25	1	-3	-1	multi-exon	FALSE	canonical	1	96426	junction_19	53049.52973257769	NA	1	NA	TRUE	NA	NA	NA	C	coding	823	2472	492	2963	20.0	-11	True	AATAAA	-16
PB.3561.2	chr14	-	5212	19	novel_in_catalog	AREL1	novel	742	6	NA	NA	-3	-1	combination_of_known_junctions	TRUE	canonical	1	3455	junction_7	86925.0455317364	NA	2	NA	TRUE	NA	NA	NA	C	coding	385	1158	741	1898	20.0	-4	True	AATAAA	-16
PB.3561.4	chr14	-	5522	21	novel_not_in_catalog	AREL1	novel	742	6	NA	NA	-2	9	any annotated donor/acceptor	FALSE	canonical	1	7352	junction_19	84382.75316876074	NA	1	NA	TRUE	NA	NA	NA	C	coding	823	2472	594	3065	50.0	-21	True	AATAAA	-6
PB.3561.5	chr14	-	5430	20	novel_not_in_catalog	AREL1	novel	742	6	NA	NA	4	9	any annotated donor/acceptor	FALSE	canonical	1	1106	junction_16	72570.61783556767	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	478	2973	50.0	3	True	AATAAA	-6
PB.9548.11	chr5	+	4022	23	novel_not_in_catalog	FBXO38	novel	3680	21	NA	NA	10	-267	any annotated donor/acceptor	FALSE	canonical	1	762	junction_15	63543.40185280341	NA	0	NA	TRUE	NA	NA	NA	C	coding	1155	3468	142	3609	0.0	4	True	AGTAAA	-14
PB.3561.7	chr14	-	5388	20	novel_not_in_catalog	AREL1	novel	742	6	NA	NA	-1	9	any annotated donor/acceptor	FALSE	canonical	1	12966	junction_16	70689.67800514383	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	490	2931	50.0	-9	True	AATAAA	-6
PB.3561.8	chr14	-	5399	20	novel_in_catalog	AREL1	novel	742	6	NA	NA	-3	9	combination_of_known_junctions	FALSE	canonical	1	3825	junction_12	73370.06123077935	NA	1	NA	TRUE	NA	NA	NA	C	coding	809	2430	513	2942	50.0	-32	True	AATAAA	-6
PB.3561.9	chr14	-	5202	19	full-splice_match	AREL1	ENST00000556202.5	2639	19	-12	-2551	-1	9	multi-exon	FALSE	canonical	1	14404	junction_16	71857.29159750174	NA	2	NA	TRUE	NA	NA	NA	C	coding	662	1989	757	2745	50.0	-20	True	AATAAA	-6
PB.6310.1	chr2	+	1772	5	full-splice_match	HPCAL1	ENST00000307845.7	1751	5	-23	2	-5	-2	multi-exon	FALSE	canonical	1	360888	junction_1	293093.9336808253	NA	0	NA	TRUE	NA	NA	NA	A	coding	193	582	405	986	10.0	-20	True	AATAAA	-4
PB.9120.3	chr5	-	2783	16	novel_in_catalog	BRD9	novel	750	3	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	60010	junction_13	118282.05608076541	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	804	2057	15.0	-1	True	CATAAA	-16
PB.10269.1	chr6	+	3558	4	incomplete-splice_match	UST	ENST00000367463.4	4198	8	217091	1	10512	-1	5prime_fragment	FALSE	canonical	1	91018	junction_1	6988.254002252637	NA	2	NA	TRUE	NA	NA	NA	A	coding	193	582	104	685	35.0	NA	False	AATAAA	-16
PB.9120.2	chr5	-	2723	16	novel_in_catalog	BRD9	novel	750	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	57593	junction_10	118139.30231883976	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	143	1996	15.0	1	True	CATAAA	-17
PB.6273.5	chr19	+	2271	4	full-splice_match	ZNF584	ENST00000306910.8	2332	4	47	14	-2	3	multi-exon	FALSE	canonical	1	8274	junction_1	33571.81583809054	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	477	1742	30.0	-7	True	AATAAA	-13
PB.4149.12	chr16	-	3811	6	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	-431	0	intron_retention	FALSE	canonical	1	515657	junction_1	82052.65764471008	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	2015	2524	10.0	NA	False	AATAAA	-12
PB.9638.5	chr5	-	2573	15	novel_in_catalog	UIMC1	novel	2570	15	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	6909	junction_14	117247.7391592656	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	183	2342	30.0	-36	False	TTTAAA	-4
PB.4149.10	chr16	-	6927	22	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	-8	0	intron_retention	FALSE	canonical	1	196883	junction_21	134432.94176061425	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	60	1484	10.0	-9	True	AATAAA	-12
PB.6273.1	chr19	+	2452	5	novel_not_in_catalog	ZNF584	novel	591	3	NA	NA	5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	25691.972754150273	NA	2	1	TRUE	NA	NA	NA	C	coding	136	411	578	988	25.0	-121	False	AATAAA	-22
PB.9120.1	chr5	-	2670	16	full-splice_match	BRD9	ENST00000467963.5	2156	16	23	-537	-1	5	multi-exon	FALSE	canonical	1	120520	junction_6	97250.3224418762	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	145	1938	20.0	-1	True	CATAAA	-22
PB.6273.3	chr19	+	2239	4	full-splice_match	ZNF584	ENST00000593920.5	2187	4	-39	-13	24	0	multi-exon	FALSE	canonical	1	14322	junction_1	30843.868023752577	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	570	1700	25.0	-30	True	AATAAA	-23
PB.6273.2	chr19	+	2279	4	novel_in_catalog	ZNF584	novel	591	3	NA	NA	24	-1	combination_of_known_junctions	FALSE	canonical	1	16869	junction_1	29701.965064060434	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	500	1741	25.0	-30	True	AATAAA	-22
PB.11874.5	chr9	+	2099	11	full-splice_match	GTF3C5	ENST00000372097.9	2406	11	305	2	-10	0	multi-exon	FALSE	canonical	1	421245	junction_1	170280.12521139983	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	19	1578	10.0	-6	True	ATTAAA	-14
PB.6918.4	chr2	-	3535	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	-29	776	-5	771	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	120	2780	30.0	9623	False	AATAAA	-25
PB.7024.4	chr2	+	2478	14	full-splice_match	ANKZF1	ENST00000323348.9	2579	14	81	20	0	0	multi-exon	FALSE	canonical	1	228499	junction_2	118185.95657766414	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	94	2274	30.0	0	True	AATAAA	-12
PB.7024.5	chr2	+	3060	13	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	4	-3	intron_retention	FALSE	canonical	1	228499	junction_2	121889.6242691404	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	122	1402	25.0	-28	True	AATAAA	-29
PB.7024.6	chr2	+	3811	10	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	6	0	intron_retention	FALSE	canonical	1	228499	junction_2	132410.0558903624	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	2612	3607	30.0	-26	True	AATAAA	-12
PB.7024.7	chr2	+	3280	11	full-splice_match	ANKZF1	ENST00000463792.5	3245	11	-25	-10	7	-8	multi-exon	FALSE	canonical	1	39006	junction_2	157578.6579513863	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	259	1344	30.0	-25	True	AATAAA	-24
PB.7024.1	chr2	+	5291	9	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	5	0	intron_retention	FALSE	canonical	1	277850	junction_4	125885.76164715522	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	3704	4318	30.0	-177	False	AATAAA	-12
PB.7024.2	chr2	+	2970	12	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	3	-1	intron_retention	TRUE	canonical	1	22558	junction_9	158694.67913908724	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	142	1422	20.0	-149	False	AATAAA	-31
PB.7024.3	chr2	+	4044	8	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	39006	junction_2	181148.71626880698	NA	14	NA	TRUE	NA	NA	NA	C	coding	169	510	2566	3075	30.0	-35	True	AATAAA	-8
PB.11883.5	chr9	-	2139	8	novel_in_catalog	REXO4	novel	1899	6	NA	NA	-27	-3	combination_of_known_junctions	FALSE	canonical	1	10088	junction_7	143607.15472171054	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	394	1251	20.0	5	True	AATAAA	-17
PB.7024.8	chr2	+	3589	11	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-7	0	intron_retention	FALSE	canonical	1	228499	junction_2	124682.89526009573	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	112	741	30.0	-18	True	AATAAA	-12
PB.6918.9	chr2	-	4195	17	novel_in_catalog	GTF3C3	novel	4282	18	NA	NA	4	198	intron_retention	FALSE	canonical	1	235101	junction_12	68654.09481207107	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	1947	4013	35.0	-44	True	NA	NA
PB.2649.2	chr12	+	1845	10	novel_not_in_catalog	AC078778.2	novel	567	2	NA	NA	48501	6767	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	622531.7535038219	NA	0	NA	TRUE	NA	NA	NA	B	coding	177	534	33	566	5.0	-8	True	AATAAA	-19
PB.4376.2	chr16	-	2569	5	novel_not_in_catalog	ZNF785	novel	499	3	NA	NA	-112	-100	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	40646.59108400113	NA	2	1	TRUE	NA	NA	NA	B	coding	230	693	170	862	15.0	79	False	AGTAAA	-15
PB.4376.1	chr16	-	2872	4	novel_in_catalog	ZNF785	novel	499	3	NA	NA	35	-5	combination_of_known_junctions	FALSE	canonical	1	10640	junction_1	36586.86220793227	NA	1	NA	TRUE	NA	NA	NA	B	coding	405	1218	124	1341	25.0	-46	True	AATAAA	-11
PB.2649.1	chr12	+	1818	8	full-splice_match	COPZ1	ENST00000455864.6	880	8	-8	-930	0	-6	multi-exon	FALSE	canonical	1	41724	junction_1	671710.4477716814	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	34	498	20.0	-9	True	AATAAA	-12
PB.2649.6	chr12	+	1794	8	full-splice_match	COPZ1	ENST00000550171.5	1026	8	0	-768	0	1	multi-exon	FALSE	canonical	1	27899	junction_3	638707.5547303575	NA	0	NA	TRUE	NA	NA	NA	C	coding	95	288	26	313	5.0	-1	True	AATAAA	-19
PB.12117.6	chrX	+	2808	14	novel_not_in_catalog	MSN	novel	568	4	NA	NA	-16	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	636319.6196264409	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	189	1922	20.0	0	True	AATAAA	-17
PB.2649.4	chr12	+	1891	9	full-splice_match	COPZ1	ENST00000262061.6	1897	9	7	-1	3	1	multi-exon	FALSE	canonical	1	1386904	junction_1	290523.91819596797	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	31	564	5.0	-6	True	AATAAA	-19
PB.2649.5	chr12	+	1948	10	full-splice_match	COPZ1	ENST00000552218.5	797	10	8	-1159	0	0	multi-exon	FALSE	canonical	1	4101	junction_6	779967.8420105646	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	26	622	5.0	-1	True	AATAAA	-18
PB.106.1	chr1	+	2403	4	full-splice_match	EFHD2	ENST00000375980.8	2419	4	11	5	11	-5	multi-exon	FALSE	canonical	1	1134928	junction_1	286554.05855246383	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	67	789	15.0	-47	True	GATAAA	-14
PB.7004.8	chr2	-	3009	11	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	523090	junction_9	413995.58870211407	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	1323	1736	30.0	-19	True	AATAAA	-17
PB.11091.2	chr8	+	3987	5	novel_in_catalog	BAG4	novel	530	4	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	1	3267	junction_1	94725.02186955408	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	457	1188	35.0	-543	False	AATAAA	-21
PB.106.2	chr1	+	2253	4	full-splice_match	EFHD2	ENST00000375980.8	2419	4	31	135	31	-135	multi-exon	FALSE	canonical	1	1134928	junction_1	286554.05855246383	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	47	769	0.0	-27	True	TATAAA	-18
PB.8038.29	chr3	+	3735	15	full-splice_match	CTNNB1	ENST00000643297.1	3283	15	32	-484	0	1	multi-exon	FALSE	canonical	1	29546	junction_1	753880.6472877926	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	288	2633	10.0	0	True	ATTAAA	-16
PB.8038.28	chr3	+	1585	1	novel_in_catalog	CTNNB1	novel	3278	16	NA	NA	-5	-22989	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-5	True	NA	NA
PB.11091.6	chr8	+	4098	4	full-splice_match	BAG4	ENST00000432471.6	1943	4	250	-2405	239	-8	multi-exon	FALSE	canonical	1	9645	junction_1	91787.6391980726	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	33	1298	35.0	-17	True	AATAAA	-22
PB.8829.11	chr4	-	2301	22	full-splice_match	SDAD1	ENST00000356260.9	3017	22	15	701	0	-331	multi-exon	FALSE	canonical	1	96282	junction_6	58771.294227223356	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	105	2168	20.0	-7	True	ATTAAA	-43
PB.138.1	chr1	+	2017	4	full-splice_match	NBL1	ENST00000375136.7	2172	4	154	1	154	-1	multi-exon	FALSE	canonical	1	98588	junction_1	514077.6353718916	NA	9	2	TRUE	NA	NA	NA	A	coding	181	546	150	695	5.0	4	True	AATAAA	-13
PB.9986.5	chr6	-	2466	4	full-splice_match	MED20	ENST00000265350.8	2438	4	-30	2	10	-1	multi-exon	FALSE	canonical	1	142104	junction_1	23968.97684276258	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	112	750	10.0	-11	True	AATAAA	-13
PB.9986.4	chr6	-	4456	3	full-splice_match	MED20	ENST00000409060.1	815	3	-45	-3596	1	-1	multi-exon	FALSE	canonical	1	186867	junction_2	5260.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	121	558	10.0	-20	True	AATAAA	-13
PB.9986.3	chr6	-	2221	3	novel_in_catalog	MED20	novel	2438	4	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	16361	junction_1	85253.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	407	754	10.0	-19	True	AATAAA	-14
PB.9986.2	chr6	-	4296	8	novel_not_in_catalog	USP49	novel	9034	7	NA	NA	-25778	-291	any annotated donor/acceptor	FALSE	canonical	1	5616	junction_5	55665.9304187737	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1923	665	2587	100.0	-21	True	NA	NA
PB.9986.1	chr6	-	5406	8	novel_in_catalog	USP49	novel	9034	7	NA	NA	-15	3218	combination_of_known_junctions	FALSE	canonical	1	9340	junction_7	14373.54684190115	NA	0	NA	TRUE	NA	NA	NA	B	coding	585	1758	238	1995	90.0	-2	True	NA	NA
PB.455.14	chr1	+	1987	5	full-splice_match	AK4	ENST00000474968.5	928	5	-8	-1051	-8	599	multi-exon	FALSE	canonical	1	102	junction_4	14755.63092517565	NA	2	NA	TRUE	NA	NA	NA	C	coding	171	516	159	674	25.0	0	True	AATAAA	-10
PB.8006.16	chr3	+	3315	19	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	-11	541	combination_of_known_junctions	FALSE	canonical	1	3680	junction_1	392256.7587470807	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	795	2831	15.0	-34	True	AATAAA	-17
PB.7004.9	chr2	-	2863	13	full-splice_match	TMBIM1	ENST00000444881.5	2936	13	72	1	72	-1	multi-exon	FALSE	canonical	1	789	junction_12	616268.7846941372	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	655	1590	30.0	2	True	AATAAA	-17
PB.8829.16	chr4	-	2023	21	incomplete-splice_match	SDAD1	ENST00000356260.9	3017	22	18	6153	3	4053	3prime_fragment	FALSE	canonical	1	96282	junction_5	54358.8822054639	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1920	102	2021	75.0	-4	True	AAGAAA	-30
PB.11627.7	chr9	-	2941	14	novel_not_in_catalog	AGTPBP1	novel	4208	26	NA	NA	-54249	-10	any annotated donor/acceptor	FALSE	canonical	1	2852	junction_13	105346.59635450634	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	969	2384	30.0	NA	False	AATAAA	-7
PB.9590.10	chr5	+	4234	33	novel_not_in_catalog	CYFIP2	novel	4210	32	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	396	junction_4	243155.8649347934	NA	5	2	TRUE	NA	NA	NA	C	coding	622	1869	1242	3110	90.0	-4	True	CATAAA	-3
PB.7774.1	chr22	-	2414	4	novel_in_catalog	TPTEP2-CSNK1E	novel	1770	15	NA	NA	-403	-75968	intron_retention	FALSE	canonical	1	20443	junction_1	39350.84815971428	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-11	True	AATAAA	-28
PB.504.18	chr1	-	2565	13	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4753	junction_10	30105.868317304667	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	1153	1788	80.0	-5	True	NA	NA
PB.10411.3	chr7	-	4544	13	incomplete-splice_match	ETV1	ENST00000430479.5	6740	14	250	2044	-20	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	67573.89837363035	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	517	1950	25.0	-1	True	AATAAA	-20
PB.9874.7	chr6	-	3804	26	novel_in_catalog	BAG6	novel	488	2	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	64467	junction_25	599917.8300993561	NA	1	NA	TRUE	NA	NA	NA	C	coding	1161	3486	217	3702	25.0	8053	False	AATAAA	-30
PB.7366.1	chr20	+	944	1	novel_in_catalog	PFDN4	novel	1462	4	NA	NA	-10	-10175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	17	328	65.0	-2	True	NA	NA
PB.8006.11	chr3	+	4388	18	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	16	541	intron_retention	FALSE	canonical	1	6117	junction_6	366846.0949098249	NA	4	NA	TRUE	NA	NA	NA	C	coding	675	2028	1877	3904	15.0	-43	True	AATAAA	-17
PB.1315.1	chr10	-	2225	11	incomplete-splice_match	CUBN	ENST00000377833.9	11933	67	252897	574	-10065	-574	5prime_fragment	FALSE	canonical	1	10881	junction_6	4589.511307318025	NA	1	NA	TRUE	NA	NA	NA	A	coding	562	1689	102	1790	85.0	NA	False	NA	NA
PB.10411.1	chr7	-	4491	13	full-splice_match	ETV1	ENST00000405218.6	3391	13	247	-1347	-24	-4	multi-exon	FALSE	non_canonical	0	0	junction_4	62523.85485467838	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	226	1659	30.0	198	False	AATAAA	-13
PB.7385.1	chr20	-	2739	1	antisense	novelGene_GNAS_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	5692	False	NA	NA
PB.11284.56	chr8	-	2399	2	incomplete-splice_match	AZIN1	ENST00000518940.5	574	4	-128	12401	30	-6110	3prime_fragment	FALSE	canonical	1	988701	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	17	54	248	301	95.0	-1	True	NA	NA
PB.9590.11	chr5	+	4150	32	novel_not_in_catalog	CYFIP2	novel	4210	32	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	396	junction_4	223578.28223222998	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	1226	3943	90.0	12	True	CATAAA	-3
PB.11284.54	chr8	-	2341	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	30	486	30	238	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	737	2083	45.0	-1	True	AATAAA	-7
PB.7366.2	chr20	+	678	4	full-splice_match	PFDN4	ENST00000371419.6	1462	4	243	541	-5	127	multi-exon	FALSE	canonical	1	372968	junction_1	298375.41077567963	NA	1	1	TRUE	NA	NA	NA	C	coding	134	405	12	416	20.0	3	True	ATTAAA	-16
PB.4340.8	chr16	+	5066	11	novel_in_catalog	CD19	novel	1957	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	188414	junction_1	55612.74999215558	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	35	514	25.0	-9	True	AATAAA	-23
PB.4340.9	chr16	+	3112	12	novel_in_catalog	CD19	novel	1957	15	NA	NA	19	0	intron_retention	FALSE	canonical	1	170479	junction_3	60546.7991618368	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	15	494	25.0	11	True	AATAAA	-23
PB.11284.50	chr8	-	2601	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	22	234	22	-234	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	745	2091	25.0	8258	False	AATAAA	-23
PB.10282.4	chr6	+	6443	3	full-splice_match	AKAP12	ENST00000354675.10	6287	3	-156	0	-156	0	multi-exon	FALSE	canonical	1	210824	junction_1	284060.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	1684	5055	330	5384	20.0	1	True	AATAAA	-16
PB.4340.4	chr16	+	1937	15	full-splice_match	CD19	ENST00000324662.7	1932	15	-1	-4	-1	0	multi-exon	FALSE	canonical	1	97347	junction_2	69375.8102626336	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	46	1716	25.0	-20	True	AATAAA	-23
PB.4340.5	chr16	+	2556	13	novel_not_in_catalog	CD19	novel	1957	15	NA	NA	1	-1	intron_retention	FALSE	canonical	1	4919	junction_3	90184.32898683427	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	44	523	25.0	-18	True	AATAAA	-22
PB.4340.6	chr16	+	2534	13	novel_in_catalog	CD19	novel	1957	15	NA	NA	1	-1	intron_retention	FALSE	canonical	1	170479	junction_3	58507.344632248234	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	36	515	25.0	-10	True	AATAAA	-22
PB.4340.7	chr16	+	2224	14	novel_in_catalog	CD19	novel	1957	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	170479	junction_3	56774.27113156724	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	786	2003	25.0	-9	True	AATAAA	-23
PB.1051.11	chr1	+	4707	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-26	-2	any annotated donor/acceptor	FALSE	canonical	1	6659	junction_3	189263.6627811895	NA	3	1	TRUE	NA	NA	NA	C	coding	810	2433	642	3074	15.0	5	True	TTTAAA	-40
PB.4340.1	chr16	+	1815	16	novel_not_in_catalog	CD19	novel	1957	15	NA	NA	9	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	91745.59115922442	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	377	1594	25.0	-28	True	AATAAA	-23
PB.4340.2	chr16	+	2417	14	novel_not_in_catalog	CD19	novel	1957	15	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	90317.62241978101	NA	3	NA	TRUE	NA	NA	NA	C	coding	181	546	670	1215	25.0	-23	True	AATAAA	-22
PB.4340.3	chr16	+	2169	15	novel_not_in_catalog	CD19	novel	1957	15	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	4831	junction_6	94118.16163391068	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	46	1185	25.0	-20	True	AATAAA	-23
PB.11656.12	chr9	+	4121	15	incomplete-splice_match	FAM120A	ENST00000277165.10	5118	18	45747	1	-32001	-1	5prime_fragment	FALSE	canonical	1	7977	junction_3	255703.03418156417	NA	5	NA	TRUE	NA	NA	NA	C	coding	784	2355	201	2555	25.0	NA	False	AATAAA	-18
PB.7943.4	chr3	-	3141	16	novel_in_catalog	RAF1	novel	3300	17	NA	NA	-26	-8	combination_of_known_junctions	FALSE	canonical	1	100190	junction_11	256072.49457557913	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	389	2236	15.0	-58	False	AATAAA	-14
PB.133.3	chr1	+	2048	8	full-splice_match	MRTO4	ENST00000330263.4	2315	8	266	1	-30	-1	multi-exon	FALSE	canonical	1	234032	junction_2	190606.20917515372	NA	15	1	TRUE	NA	NA	NA	C	coding	239	720	32	751	10.0	0	True	AGTAAA	-16
PB.4657.4	chr17	+	2528	13	novel_in_catalog	DPH1	novel	2221	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	188543	junction_11	68210.55955331541	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	3	1334	15.0	0	True	AATAAA	-13
PB.10282.1	chr6	+	6560	4	full-splice_match	AKAP12	ENST00000253332.5	6597	4	36	1	36	-1	multi-exon	FALSE	canonical	1	93955	junction_1	301364.49157162197	NA	24	NA	TRUE	NA	NA	NA	C	coding	1782	5349	154	5502	20.0	0	True	AATAAA	-15
PB.133.2	chr1	+	1367	8	full-splice_match	MRTO4	ENST00000330263.4	2315	8	266	682	-30	-682	multi-exon	FALSE	canonical	1	234032	junction_2	190606.20917515372	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	32	751	10.0	0	True	NA	NA
PB.9590.12	chr5	+	4047	31	full-splice_match	CYFIP2	ENST00000620254.4	4124	31	60	17	2	0	multi-exon	FALSE	canonical	1	396	junction_4	178351.58177699335	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	79	3840	90.0	-4129	False	CATAAA	-3
PB.11846.4	chr9	+	2745	5	full-splice_match	TOR1B	ENST00000259339.6	2769	5	25	-1	21	1	multi-exon	FALSE	canonical	1	205860	junction_1	153636.31392594005	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	36	1046	15.0	-6	True	AATAAA	-18
PB.1245.10	chr1	-	6597	33	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	22	10672	22	87	3prime_fragment	FALSE	canonical	1	25	junction_17	22743.988367099853	NA	0	NA	TRUE	NA	NA	NA	C	coding	2074	6222	376	6597	60.0	2	True	NA	NA
PB.9357.8	chr5	+	2854	15	incomplete-splice_match	ERAP2	ENST00000437043.7	5705	19	549	9614	-12	-178	3prime_fragment	FALSE	canonical	1	69924	junction_1	45745.32893317177	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2340	181	2520	60.0	-12	True	NA	NA
PB.285.1	chr1	+	6271	19	full-splice_match	AGO1	ENST00000373204.5	13708	19	-39	7476	-39	2094	multi-exon	FALSE	canonical	1	68223	junction_1	42247.91735037888	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	253	2826	15.0	-63	False	AATAAA	-15
PB.6491.2	chr2	-	1809	5	incomplete-splice_match	FAM161A	ENST00000404929.5	3762	7	-5	11213	-5	-12	3prime_fragment	FALSE	canonical	1	19037	junction_1	13325.088956082056	NA	1	NA	TRUE	NA	NA	NA	B	coding	597	1791	18	1808	70.0	-15	True	NA	NA
PB.6491.1	chr2	-	1625	4	incomplete-splice_match	FAM161A	ENST00000405894.3	3684	6	102	11212	12	-11	3prime_fragment	FALSE	canonical	1	34568	junction_1	9212.904102398983	NA	0	NA	TRUE	NA	NA	NA	B	coding	541	1623	1	1623	70.0	2	True	NA	NA
PB.285.2	chr1	+	5464	19	full-splice_match	AGO1	ENST00000373204.5	13708	19	-13	8257	-13	1313	multi-exon	FALSE	canonical	1	68223	junction_1	42247.91735037888	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	227	2800	30.0	-19	True	AATAAA	-31
PB.285.5	chr1	+	3096	19	full-splice_match	AGO1	ENST00000373204.5	13708	19	-1	10613	-1	-104	multi-exon	FALSE	canonical	1	68223	junction_1	42247.91735037888	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	215	2788	35.0	-7	True	NA	NA
PB.285.4	chr1	+	4139	19	full-splice_match	AGO1	ENST00000373204.5	13708	19	-1	9570	-1	0	multi-exon	FALSE	canonical	1	68223	junction_1	42247.91735037888	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	215	2788	20.0	-7	True	NA	NA
PB.285.6	chr1	+	7476	19	full-splice_match	AGO1	ENST00000373204.5	13708	19	-1	6233	-1	3337	multi-exon	FALSE	canonical	1	68223	junction_1	42247.91735037888	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	215	2788	15.0	-7	True	TATAAA	-22
PB.3509.2	chr14	+	1487	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	341	2657	-15	191	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	121	1068	15.0	-15	True	AATAAA	-16
PB.3509.3	chr14	+	2572	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	358	1555	2	839	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	104	1051	25.0	2	True	AATATA	-20
PB.3509.1	chr14	+	3050	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	358	1077	2	-1077	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	10	1	TRUE	NA	NA	NA	C	coding	315	948	104	1051	90.0	2	True	NA	NA
PB.3509.6	chr14	+	3730	9	novel_not_in_catalog	EIF2S1	novel	4485	8	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	472243.46566824976	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	135	1082	30.0	-29	True	NA	NA
PB.3509.7	chr14	+	2792	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	331	1362	-25	1032	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	131	1078	70.0	-25	True	AATAGA	-26
PB.3509.4	chr14	+	4132	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	349	4	-7	-4	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	113	1060	35.0	-7	True	NA	NA
PB.3509.5	chr14	+	2190	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	313	1982	-43	412	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	149	1096	25.0	-43	True	CATAAA	-17
PB.8761.1	chr4	+	1726	3	intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	112	junction_2	149.5	NA	1	NA	FALSE	NA	NA	NA	A	coding	21	66	242	307	15.0	NA	False	NA	NA
PB.3509.8	chr14	+	3797	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	333	355	-23	-355	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	129	1076	65.0	-23	True	ACTAAA	-43
PB.3509.9	chr14	+	1945	8	full-splice_match	EIF2S1	ENST00000256383.8	4485	8	333	2207	-23	187	multi-exon	FALSE	canonical	1	868182	junction_2	316072.042455901	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	129	1076	20.0	-23	True	ATTAAA	-16
PB.241.3	chr1	-	1483	10	full-splice_match	SNRNP40	ENST00000263694.8	1597	10	6	108	6	-2	multi-exon	FALSE	canonical	1	299571	junction_3	142837.87627781212	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	14	1087	25.0	17	True	ATTAAA	-24
PB.808.7	chr1	+	1448	12	full-splice_match	DAP3	ENST00000535183.5	1894	12	1	445	1	0	multi-exon	FALSE	canonical	1	73948	junction_2	432511.5033919678	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	91	1164	35.0	1	True	AATAAA	-11
PB.10830.8	chr7	+	2873	7	novel_in_catalog	IRF5	novel	2988	9	NA	NA	-10	-9	intron_retention	FALSE	canonical	1	69172	junction_1	93282.57631519403	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	1272	2312	40.0	-54	True	AATGAA	-5
PB.10830.9	chr7	+	2818	9	novel_not_in_catalog	IRF5	novel	2988	9	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	28	junction_5	109138.90252098184	NA	4	1	TRUE	NA	NA	NA	C	coding	255	768	835	1602	15.0	-54	True	NA	NA
PB.10200.9	chr6	+	5334	15	incomplete-splice_match	NCOA7	ENST00000392477.6	6457	16	24424	922	-31	-3	5prime_fragment	FALSE	canonical	1	83507	junction_7	122650.39773706901	NA	1	NA	TRUE	NA	NA	NA	C	coding	942	2829	169	2997	25.0	429	False	AATAAA	-18
PB.241.2	chr1	-	3647	9	novel_in_catalog	SNRNP40	novel	1597	10	NA	NA	-2	3	intron_retention	FALSE	canonical	1	299571	junction_3	148080.1636846049	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	34	942	20.0	-3	True	ATTAAA	-30
PB.7006.5	chr2	+	3122	2	incomplete-splice_match	CTDSP1	ENST00000488627.5	1118	7	1653	-1167	1547	-1	intron_retention	FALSE	canonical	1	1074671	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	366	773	10.0	-1636	False	ACTAAA	-18
PB.8510.11	chr3	+	2835	8	full-splice_match	MYNN	ENST00000349841.9	4999	8	566	1598	-8	39	multi-exon	FALSE	canonical	1	152230	junction_2	34926.75055318032	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	98	1930	35.0	-8	True	TATAAA	-16
PB.10830.1	chr7	+	2295	9	full-splice_match	IRF5	ENST00000489702.6	2988	9	45	648	45	-9	multi-exon	FALSE	canonical	1	12183	junction_1	103259.85665717039	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	190	1734	40.0	-4521	False	AATGAA	-5
PB.10830.2	chr7	+	2824	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	125	1	intron_retention	FALSE	canonical	1	12183	junction_1	106042.30434094451	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	110	1606	10.0	-4441	False	NA	NA
PB.10830.3	chr7	+	2901	9	full-splice_match	IRF5	ENST00000489702.6	2988	9	94	-7	94	-1	multi-exon	FALSE	canonical	1	12183	junction_1	103259.85665717039	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	141	1685	15.0	-4472	False	NA	NA
PB.10830.4	chr7	+	2196	9	novel_not_in_catalog	IRF5	novel	2988	9	NA	NA	67	-9	any annotated donor/acceptor	FALSE	canonical	1	28	junction_5	118344.73252721263	NA	3	1	TRUE	NA	NA	NA	C	coding	255	768	868	1635	40.0	-4499	False	AATGAA	-5
PB.10830.5	chr7	+	3076	8	novel_in_catalog	IRF5	novel	2988	9	NA	NA	-16	1	intron_retention	FALSE	canonical	1	69172	junction_1	87432.21215948983	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	818	1858	10.0	-60	True	NA	NA
PB.10830.6	chr7	+	2416	8	novel_in_catalog	IRF5	novel	2988	9	NA	NA	-13	-9	intron_retention	FALSE	canonical	1	69172	junction_1	87432.21215948983	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	815	1855	40.0	-57	True	AATGAA	-5
PB.10830.7	chr7	+	3527	7	novel_in_catalog	IRF5	novel	2988	9	NA	NA	-12	1	intron_retention	FALSE	canonical	1	69172	junction_1	93282.57631519403	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	1274	2314	25.0	-56	True	NA	NA
PB.7351.7	chr20	-	2142	3	full-splice_match	UBE2V1	ENST00000415862.6	2387	3	0	245	0	-245	multi-exon	FALSE	canonical	1	10352	junction_2	79347.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	432	743	15.0	-13	True	AATAAA	-18
PB.7351.6	chr20	-	2295	4	full-splice_match	UBE2V1	ENST00000340309.7	2536	4	-4	245	1	-245	multi-exon	FALSE	canonical	1	39349	junction_3	53828.53490069701	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	384	896	15.0	-17	True	AATAAA	-18
PB.7351.5	chr20	-	1735	3	full-splice_match	UBE2V1	ENST00000396059.7	1983	3	4	244	-1	-244	multi-exon	FALSE	canonical	1	61937	junction_2	53554.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	AATAAA	-19
PB.7351.4	chr20	-	2004	5	novel_not_in_catalog	UBE2V1	novel	1956	5	NA	NA	-2	-243	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	70016.85761434528	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	286	603	10.0	-5	True	AATAAA	-20
PB.7351.3	chr20	-	2107	4	full-splice_match	UBE2V1	ENST00000371674.7	2133	4	23	3	-4	-3	multi-exon	FALSE	canonical	1	83635	junction_2	191435.37679389934	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	23	466	20.0	-5	True	AATAAA	-22
PB.7351.2	chr20	-	3321	3	full-splice_match	UBE2V1	ENST00000467839.5	566	3	-4	-2751	-4	-3	multi-exon	FALSE	canonical	1	83635	junction_1	221004.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	23	511	20.0	-5	True	AATAAA	-22
PB.7351.1	chr20	-	1959	3	full-splice_match	UBE2V1	ENST00000396059.7	1983	3	22	2	-4	-2	multi-exon	FALSE	canonical	1	61937	junction_2	53554.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	58	177	141	317	20.0	-5	True	AATAAA	-23
PB.7351.9	chr20	-	1763	5	novel_not_in_catalog	UBE2V1	novel	1956	5	NA	NA	-2	-245	any annotated donor/acceptor	FALSE	canonical	1	9419	junction_1	198006.24096145935	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	42	485	15.0	-5	True	AATAAA	-18
PB.7351.8	chr20	-	1865	4	full-splice_match	UBE2V1	ENST00000371674.7	2133	4	23	245	-4	-245	multi-exon	FALSE	canonical	1	83635	junction_2	191435.37679389934	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	23	466	15.0	-5	True	AATAAA	-18
PB.7872.9	chr22	+	2015	12	novel_in_catalog	TBC1D22A	novel	3934	14	NA	NA	-3	-4	no_combination_of_known_junctions	FALSE	canonical	1	11657	junction_8	102206.48979160111	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	119	1207	40.0	9	True	AATAAA	-9
PB.7872.8	chr22	+	2006	12	novel_in_catalog	TBC1D22A	novel	3934	14	NA	NA	-3	1	no_combination_of_known_junctions	FALSE	canonical	1	8666	junction_10	96333.3721898651	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	119	1324	20.0	9	True	AATAAA	-18
PB.7006.2	chr2	+	1803	7	full-splice_match	CTDSP1	ENST00000273062.6	2638	7	292	543	-24	-543	multi-exon	TRUE	canonical	1	269796	junction_2	330596.4402598313	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	45	830	50.0	-11	True	NA	NA
PB.5976.8	chr19	-	2791	31	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	91620.30750275232	NA	12	2	TRUE	NA	NA	NA	C	coding	825	2478	207	2684	5.0	933	False	AATAAA	-19
PB.5976.9	chr19	-	2698	31	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	1273	junction_20	76978.8421341648	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	1140	2591	5.0	-16	True	AATAAA	-19
PB.5976.6	chr19	-	2769	30	novel_in_catalog	MAP4K1	novel	443	5	NA	NA	-10	0	intron_retention	FALSE	canonical	1	183912	junction_13	57070.33871092988	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	119	2662	5.0	-4	True	AATAAA	-19
PB.5976.7	chr19	-	2748	32	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	-19	0	any annotated donor/acceptor	TRUE	canonical	1	13	junction_2	89809.28531739714	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	128	2641	5.0	911	False	AATAAA	-19
PB.5976.4	chr19	-	2806	32	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	2138	junction_1	89442.5457904433	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	116	2617	5.0	-1	True	AATAAA	-19
PB.5976.5	chr19	-	2823	32	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	-22	0	any annotated donor/acceptor	FALSE	canonical	1	8290	junction_15	88924.96476159076	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	131	2716	5.0	908	False	AATAAA	-19
PB.5976.2	chr19	-	2659	31	full-splice_match	MAP4K1	ENST00000396857.6	2653	31	21	-27	-13	-1	multi-exon	FALSE	canonical	1	183912	junction_13	56151.6167440044	NA	9	2	TRUE	NA	NA	NA	C	coding	821	2466	88	2553	5.0	951	False	AATAAA	-18
PB.5976.3	chr19	-	2805	32	full-splice_match	MAP4K1	ENST00000591517.5	2700	32	-105	0	-26	0	multi-exon	TRUE	canonical	1	1557	junction_1	89309.79444818295	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	135	2636	5.0	904	False	AATAAA	-19
PB.7872.7	chr22	+	1610	10	novel_not_in_catalog	TBC1D22A	novel	3934	14	NA	NA	5	182422	any annotated donor/acceptor	FALSE	canonical	1	13177	junction_9	101351.1340834428	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	124	1254	20.0	4	True	AATAAA	-16
PB.5976.1	chr19	-	3024	31	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	18	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_27	76361.33097859297	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	734	2917	5.0	3	True	AATAAA	-19
PB.6744.2	chr2	-	2848	1	novel_in_catalog	MZT2A	novel	382	3	NA	NA	-10	-181	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	189	570	1251	1820	80.0	-3	True	NA	NA
PB.9417.4	chr5	-	2885	5	full-splice_match	ZNF608	ENST00000509799.5	2605	5	-3	-277	-3	277	multi-exon	FALSE	canonical	1	17227	junction_4	27498.23943909864	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2424	462	2885	75.0	-5	True	NA	NA
PB.3712.23	chr14	-	3132	9	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	818380.1988052374	NA	6	1	TRUE	NA	NA	NA	B	coding	352	1059	391	1449	15.0	-6808	False	AATAAA	-21
PB.8511.12	chr3	+	2406	9	novel_in_catalog	SEC62	novel	363	2	NA	NA	0	319	intron_retention	FALSE	canonical	1	10573	junction_1	613103.1793739431	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	234	1319	70.0	-10	True	NA	NA
PB.11323.3	chr8	+	3076	8	novel_in_catalog	TBC1D31	novel	653	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	25596	junction_7	32413.994038856436	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	91	1146	35.0	-56	True	AATAAA	-32
PB.617.7	chr1	+	1780	10	full-splice_match	CAPZA1	ENST00000263168.3	3020	10	659	581	0	-581	multi-exon	FALSE	canonical	1	270122	junction_9	349379.07527777134	NA	53	3	TRUE	NA	NA	NA	C	coding	286	861	14	874	70.0	0	True	ATTAAA	-15
PB.6505.3	chr2	+	3360	9	novel_not_in_catalog	AFTPH	novel	4113	10	NA	NA	41	-18	intron_retention	FALSE	canonical	1	3415	junction_1	162950.8154378473	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2730	552	3281	95.0	-2	True	NA	NA
PB.6298.9	chr2	-	6513	29	novel_in_catalog	KIDINS220	novel	8735	30	NA	NA	0	562	combination_of_known_junctions	FALSE	canonical	1	106849	junction_24	82588.80699147742	NA	1	NA	TRUE	NA	NA	NA	B	coding	1753	5262	171	5432	65.0	-1	True	AAGAAA	-14
PB.5677.4	chr19	+	2431	4	full-splice_match	RAB11B	ENST00000594216.1	894	4	-30	-1507	0	-3	multi-exon	FALSE	canonical	1	1527111	junction_2	57694.00155032488	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	55	594	15.0	0	True	NA	NA
PB.2512.3	chr12	-	5300	5	novel_in_catalog	KRAS	novel	5765	5	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	1	6042	junction_4	100962.92707071987	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	185	751	25.0	-8	True	AATAAA	-16
PB.2512.2	chr12	-	5306	5	full-splice_match	KRAS	ENST00000311936.7	5765	5	2	457	0	-457	multi-exon	FALSE	canonical	1	131861	junction_3	67421.32543194327	NA	3	NA	TRUE	NA	NA	NA	C	coding	188	567	191	757	25.0	-1	True	AATAAA	-16
PB.9874.6	chr6	-	3774	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	386632	junction_24	507497.8885348779	NA	2	NA	TRUE	NA	NA	NA	C	coding	1126	3381	292	3672	25.0	8091	False	AATAAA	-30
PB.2512.4	chr12	-	5117	4	novel_in_catalog	KRAS	novel	5765	5	NA	NA	10	-457	no_combination_of_known_junctions	FALSE	canonical	1	4951	junction_2	117000.7386453417	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	9	True	AATAAA	-16
PB.2512.7	chr12	-	2193	5	full-splice_match	KRAS	ENST00000311936.7	5765	5	4	3568	2	811	multi-exon	FALSE	canonical	1	131861	junction_3	67421.32543194327	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	189	755	40.0	1	True	AATAAA	-27
PB.2512.6	chr12	-	3626	5	full-splice_match	KRAS	ENST00000311936.7	5765	5	-3	2142	2	-2142	multi-exon	FALSE	canonical	1	131861	junction_3	67421.32543194327	NA	2	NA	TRUE	NA	NA	NA	C	coding	188	567	196	762	20.0	-6	True	AATAAA	-22
PB.2512.8	chr12	-	1359	5	full-splice_match	KRAS	ENST00000311936.7	5765	5	4	4402	2	-23	multi-exon	FALSE	canonical	1	131861	junction_3	67421.32543194327	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	189	755	80.0	1	True	NA	NA
PB.8511.11	chr3	+	4614	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	43	1911	0	-1911	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	16	1215	35.0	-3	True	NA	NA
PB.9417.1	chr5	-	1760	4	incomplete-splice_match	ZNF608	ENST00000504926.5	4726	9	-107	11018	-107	303	3prime_fragment	FALSE	canonical	1	1870	junction_3	37352.12093933445	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1167	592	1758	60.0	4208	False	NA	NA
PB.211.6	chr1	-	4375	10	novel_not_in_catalog	WASF2	novel	5676	9	NA	NA	-8	-1406	any annotated donor/acceptor	FALSE	canonical	1	198	junction_9	151384.0231523871	NA	11	1	TRUE	NA	NA	NA	C	coding	498	1497	322	1818	100.0	-9	True	NA	NA
PB.211.7	chr1	-	4238	10	novel_not_in_catalog	WASF2	novel	5676	9	NA	NA	-9	-1406	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	144287.05976688568	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	226	1722	100.0	-10	True	NA	NA
PB.211.5	chr1	-	4278	9	full-splice_match	WASF2	ENST00000618852.4	5676	9	-9	1407	-9	-1407	multi-exon	FALSE	canonical	1	17828	junction_7	135850.40184881448	NA	156	5	TRUE	NA	NA	NA	C	coding	498	1497	226	1722	95.0	-10	True	NA	NA
PB.9417.2	chr5	-	1970	4	novel_in_catalog	ZNF608	novel	4726	9	NA	NA	-12	284	no_combination_of_known_junctions	FALSE	canonical	1	862	junction_3	37827.19120773662	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1149	821	1969	65.0	-1	True	NA	NA
PB.9417.3	chr5	-	3064	5	full-splice_match	ZNF608	ENST00000513986.1	2737	5	-24	-303	-24	277	multi-exon	FALSE	canonical	1	27807	junction_4	22919.486518026533	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2424	641	3064	75.0	-13	True	NA	NA
PB.504.12	chr1	-	2807	12	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	1	4115	junction_5	32155.6737818326	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	269	1132	25.0	-5	True	AATAAA	-18
PB.211.8	chr1	-	4030	8	novel_not_in_catalog	WASF2	novel	5676	9	NA	NA	70738	-1406	any annotated donor/acceptor	FALSE	canonical	1	495	junction_7	146260.26483928278	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	466	1473	100.0	-308	False	NA	NA
PB.5080.8	chr17	+	1911	7	novel_not_in_catalog	SNX11	novel	563	6	NA	NA	56	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	116906.83852680874	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	58	852	25.0	0	True	AATAAA	-12
PB.7345.1	chr20	+	4189	1	novel_in_catalog	ZFAS1	novel	1008	5	NA	NA	-5820	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	107	324	2037	2360	20.0	4378	False	AATAAA	-13
PB.11873.9	chr9	-	4973	9	novel_in_catalog	TSC1	novel	8616	23	NA	NA	0	-30	intron_retention	FALSE	canonical	1	101317	junction_8	36897.52498453487	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	2692	3429	80.0	741	False	NA	NA
PB.5080.1	chr17	+	2181	7	full-splice_match	SNX11	ENST00000582104.5	1282	7	-43	-856	-43	0	multi-exon	FALSE	canonical	1	38670	junction_2	106713.10321084704	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	158	946	25.0	-4281	False	AATAAA	-13
PB.5080.2	chr17	+	2140	7	full-splice_match	SNX11	ENST00000359238.6	2315	7	175	0	-28	0	multi-exon	FALSE	canonical	1	180680	junction_1	59907.416651771	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	111	905	25.0	-17	True	AATAAA	-13
PB.5080.3	chr17	+	2187	8	full-splice_match	SNX11	ENST00000393405.6	2733	8	215	331	-15	0	multi-exon	TRUE	canonical	1	19425	junction_1	128337.23137444233	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	140	952	25.0	-4	True	AATAAA	-13
PB.5080.4	chr17	+	2925	6	novel_in_catalog	SNX11	novel	563	6	NA	NA	-3	-9	intron_retention	FALSE	canonical	1	180680	junction_1	64778.31163715214	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	988	1368	25.0	8	True	AATAAA	-15
PB.5080.5	chr17	+	2463	7	full-splice_match	SNX11	ENST00000582104.5	1282	7	2	-1183	2	-4	multi-exon	FALSE	canonical	1	38670	junction_2	106713.10321084704	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	113	901	20.0	13	True	AATAAA	-20
PB.5080.6	chr17	+	2449	6	incomplete-splice_match	SNX11	ENST00000393405.6	2733	8	4413	3	22	-3	5prime_fragment	FALSE	canonical	1	251284	junction_1	47674.2052082675	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	92	886	25.0	-34	True	AATAAA	-21
PB.5080.7	chr17	+	2106	6	incomplete-splice_match	SNX11	ENST00000359238.6	2315	7	4400	1	36	-1	5prime_fragment	FALSE	canonical	1	251284	junction_1	47674.2052082675	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	78	872	25.0	-20	True	AATAAA	-12
PB.6346.4	chr2	+	1802	6	novel_in_catalog	UBXN2A	novel	2195	8	NA	NA	45	9	no_combination_of_known_junctions	FALSE	canonical	1	3314	junction_2	67305.80863907661	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	238	840	15.0	1	True	AATAAA	-25
PB.6346.5	chr2	+	2038	8	novel_not_in_catalog	UBXN2A	novel	2195	8	NA	NA	46	9	any annotated donor/acceptor	FALSE	canonical	1	206	junction_1	76244.42997708496	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	297	1076	15.0	2	True	AATAAA	-25
PB.6346.6	chr2	+	1641	7	full-splice_match	UBXN2A	ENST00000309033.4	6066	7	56	4369	56	-280	multi-exon	FALSE	canonical	1	129800	junction_5	26563.11064657568	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	189	968	75.0	12	True	NA	NA
PB.6346.1	chr2	+	1943	7	full-splice_match	UBXN2A	ENST00000309033.4	6066	7	44	4079	44	10	multi-exon	FALSE	canonical	1	129800	junction_5	26563.11064657568	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	201	980	15.0	0	True	AATAAA	-26
PB.6346.2	chr2	+	2397	8	novel_not_in_catalog	UBXN2A	novel	2195	8	NA	NA	20	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	60317.05873303241	NA	1	1	TRUE	NA	NA	NA	C	coding	259	780	225	1004	35.0	-24	True	ATTAAA	-16
PB.6346.3	chr2	+	2023	8	novel_not_in_catalog	UBXN2A	novel	2195	8	NA	NA	24	0	any annotated donor/acceptor	FALSE	canonical	1	1358	junction_7	67610.86324319337	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	221	901	30.0	-20	True	AATAAA	-16
PB.11769.6	chr9	-	3370	6	full-splice_match	RBM18	ENST00000417201.3	4974	6	-5	1609	-5	-1609	multi-exon	FALSE	canonical	1	264840	junction_2	32179.948280878267	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	147	719	85.0	-24	True	NA	NA
PB.11412.2	chr8	-	1958	4	novel_in_catalog	RPL8	novel	716	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	7084006	junction_3	7028622.14235651	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-32	True	AATAAA	-16
PB.4709.1	chr17	+	2473	3	novel_in_catalog	MIS12	novel	551	2	NA	NA	-40	0	no_combination_of_known_junctions	FALSE	canonical	1	1295	junction_1	73018.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	522	1139	5.0	-577	False	ATTAAA	-19
PB.10181.4	chr6	+	4055	13	novel_in_catalog	KPNA5	novel	689	6	NA	NA	3	-7151	no_combination_of_known_junctions	FALSE	canonical	1	3116	junction_2	29613.590251375954	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	155	1663	90.0	-21	True	TTTAAA	-29
PB.4709.3	chr17	+	2139	2	full-splice_match	MIS12	ENST00000573759.1	2204	2	142	-77	-39	0	multi-exon	FALSE	canonical	1	73531	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	188	805	5.0	-2	True	ATTAAA	-19
PB.4709.2	chr17	+	2508	3	full-splice_match	MIS12	ENST00000611091.4	2691	3	188	-5	-15	-1	multi-exon	FALSE	canonical	1	54733	junction_1	46299.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	558	1175	5.0	-7	True	ATTAAA	-18
PB.4709.5	chr17	+	3727	2	incomplete-splice_match	MIS12	ENST00000611091.4	2691	3	481	-6	-72	0	5prime_fragment	FALSE	canonical	1	147332	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	1776	2393	5.0	-56	False	ATTAAA	-19
PB.4709.4	chr17	+	4244	1	novel_in_catalog	MIS12	novel	2691	3	NA	NA	-12	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	205	618	2299	2916	20.0	-4	True	ATTAAA	-13
PB.10861.7	chr7	-	4703	4	full-splice_match	CYREN	ENST00000483029.2	596	4	-105	-4002	15	3316	multi-exon	FALSE	canonical	1	59787	junction_2	154546.0328021683	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	250	558	25.0	-2	True	NA	NA
PB.4709.6	chr17	+	2582	3	novel_not_in_catalog	MIS12	novel	551	2	NA	NA	-59	0	any annotated donor/acceptor	FALSE	canonical	1	7745	junction_1	69793.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	631	1248	5.0	2	True	ATTAAA	-19
PB.2387.1	chr12	-	3689	12	full-splice_match	RAD52	ENST00000358495.7	2710	12	73	-1052	0	1052	multi-exon	TRUE	canonical	1	30136	junction_8	20343.60013768417	NA	9	NA	TRUE	NA	NA	NA	C	coding	418	1257	67	1323	20.0	-8	True	ATTAAA	-17
PB.8983.3	chr4	+	3717	11	full-splice_match	JADE1	ENST00000226319.10	5772	11	77	1978	-3	912	multi-exon	FALSE	canonical	1	66321	junction_1	71935.22201182116	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	205	2733	85.0	0	True	NA	NA
PB.2387.2	chr12	-	4009	13	novel_in_catalog	RAD52	novel	2710	12	NA	NA	-6	1039	combination_of_known_junctions	FALSE	canonical	1	7580	junction_4	30074.864830558905	NA	5	NA	TRUE	NA	NA	NA	C	coding	147	444	1213	1656	55.0	168	False	ATTAAA	-4
PB.8983.5	chr4	+	3979	11	full-splice_match	JADE1	ENST00000226319.10	5772	11	98	1695	18	1195	multi-exon	FALSE	canonical	1	66321	junction_1	71935.22201182116	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	184	2712	20.0	21	True	AATAAA	-15
PB.9603.1	chr5	+	4116	5	novel_in_catalog	PTTG1	novel	753	6	NA	NA	15	-1	intron_retention	FALSE	canonical	1	617072	junction_3	557870.7919104118	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	67	486	15.0	8	True	AATAAA	-15
PB.8983.7	chr4	+	3868	11	full-splice_match	JADE1	ENST00000512960.5	3000	11	44	-912	43	912	multi-exon	FALSE	canonical	1	34706	junction_1	78939.13072006812	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	356	2884	85.0	-1433	False	NA	NA
PB.3746.10	chr15	+	4949	12	full-splice_match	ARHGAP11A	ENST00000361627.7	5898	12	-14	963	-14	876	multi-exon	FALSE	canonical	1	1295	junction_1	109993.14992923592	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	737	3808	20.0	-50	False	GATAAA	-19
PB.7901.18	chr3	+	7385	26	novel_in_catalog	CHL1	novel	8023	28	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	1045	junction_1	24950.985333457276	NA	1	1	TRUE	NA	NA	NA	C	coding	1171	3516	169	3684	30.0	-12	True	AATAAA	-21
PB.7901.19	chr3	+	1482	3	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	6	29092	any annotated donor/acceptor	FALSE	canonical	1	1639	junction_2	6396.0	NA	61	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-11	True	AATAAA	-11
PB.617.2	chr1	+	2468	10	novel_not_in_catalog	CAPZA1	novel	3020	10	NA	NA	-65	-7	any annotated donor/acceptor	FALSE	canonical	1	182	junction_1	333774.9971938108	NA	4	1	TRUE	NA	NA	NA	C	coding	228	687	302	988	25.0	-92	False	AATATA	-14
PB.8802.1	chr4	+	2252	1	genic	AC116049.2	novel	NA	NA	NA	NA	-9	-148924	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.7901.15	chr3	+	2569	2	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-4	2010	no_combination_of_known_junctions	FALSE	canonical	1	1096	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-726	False	NA	NA
PB.7901.16	chr3	+	2192	3	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	6615	junction_2	3908.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-20	True	NA	NA
PB.7901.17	chr3	+	1975	3	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	4	11161	any annotated donor/acceptor	FALSE	canonical	1	3972	junction_2	5229.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-13	True	ATTAAA	-11
PB.7901.10	chr3	+	7485	27	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	24015.569177578884	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	269	3784	30.0	-737	False	AATAAA	-21
PB.7901.11	chr3	+	3254	10	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-10	9555	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	17350.267309998286	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	264	1412	20.0	0	True	AATAAA	-24
PB.7901.12	chr3	+	5083	28	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	22585.33527208613	NA	1	NA	TRUE	NA	NA	NA	C	coding	1224	3675	264	3938	30.0	0	True	AATAAA	-22
PB.3681.5	chr14	+	3939	12	full-splice_match	EIF5	ENST00000216554.7	5945	12	206	1800	16	-3	multi-exon	FALSE	canonical	1	259288	junction_6	646631.7152561091	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	471	1766	30.0	-29	True	ATTAAA	-31
PB.205.1	chr1	+	1768	9	full-splice_match	NUDC	ENST00000321265.9	1800	9	17	15	17	-15	multi-exon	TRUE	canonical	1	298828	junction_6	316252.75389986724	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	107	1102	85.0	-13	True	NA	NA
PB.205.2	chr1	+	1315	9	full-splice_match	NUDC	ENST00000321265.9	1800	9	20	465	20	213	multi-exon	FALSE	canonical	1	298828	junction_6	316252.75389986724	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	104	1099	0.0	-10	True	ATTAAA	-17
PB.10861.4	chr7	-	5797	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	2	4234	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	23	NA	TRUE	NA	NA	NA	C	coding	102	309	426	734	20.0	-30	True	AGTAAA	-16
PB.5209.6	chr17	-	1652	9	incomplete-splice_match	WIPI1	ENST00000546360.5	1575	12	-24	6735	-4	-4	3prime_fragment	FALSE	canonical	1	20572	junction_8	123273.53163164224	NA	3	NA	TRUE	NA	NA	NA	C	coding	276	831	246	1076	95.0	-25	True	NA	NA
PB.5209.5	chr17	-	1897	10	incomplete-splice_match	WIPI1	ENST00000262139.9	1832	13	-74	6797	4	166	3prime_fragment	FALSE	canonical	1	110204	junction_9	90809.7022300542	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	75	1151	85.0	-17	True	NA	NA
PB.5209.4	chr17	-	2051	12	incomplete-splice_match	WIPI1	ENST00000262139.9	1832	13	-84	4119	-6	525	3prime_fragment	FALSE	canonical	1	110204	junction_11	84952.17528412167	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	85	1398	95.0	-27	True	NA	NA
PB.5209.3	chr17	-	1856	12	full-splice_match	WIPI1	ENST00000546360.5	1575	12	-49	-232	-15	0	multi-exon	FALSE	canonical	1	20572	junction_11	115287.90423569096	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	271	1365	25.0	-50	False	AATAAA	-14
PB.5209.2	chr17	-	2028	13	novel_not_in_catalog	WIPI1	novel	624	4	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	60	junction_12	147935.36079840938	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	307	876	25.0	-7	True	AATAAA	-14
PB.5209.1	chr17	-	1910	13	full-splice_match	WIPI1	ENST00000262139.9	1832	13	-77	-1	1	1	multi-exon	FALSE	canonical	1	110204	junction_12	89896.59745797298	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	78	1418	20.0	-20	True	AATAAA	-15
PB.10861.1	chr7	-	7536	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	13	5984	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	5	NA	TRUE	NA	NA	NA	C	coding	102	309	415	723	20.0	-19	True	NA	NA
PB.617.3	chr1	+	2503	11	novel_not_in_catalog	CAPZA1	novel	3020	10	NA	NA	-45	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	443068.1359468428	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	86	811	25.0	-72	False	AATATA	-14
PB.1051.19	chr1	+	4717	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-19	-1	no_combination_of_known_junctions	FALSE	canonical	1	214	junction_3	192548.73720922525	NA	1	1	TRUE	NA	NA	NA	C	coding	810	2433	564	2996	20.0	12	True	AATAAA	-14
PB.3652.1	chr14	-	1234	4	full-splice_match	TCL1A	ENST00000402399.5	1395	4	72	89	3	-1	multi-exon	FALSE	canonical	1	474367	junction_1	170861.26948687542	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	59	403	20.0	-4	True	ATTAAA	-19
PB.6178.1	chr19	-	4472	5	full-splice_match	ZNF616	ENST00000330123.9	2563	5	-192	-1717	-16	18	multi-exon	FALSE	canonical	1	1611	junction_1	23440.459466486573	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	1616	2161	10.0	-1	True	ATTAAA	-19
PB.10861.5	chr7	-	4972	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-34	3316	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	519	827	25.0	-4	True	NA	NA
PB.3652.2	chr14	-	2779	3	incomplete-splice_match	TCL1A	ENST00000554012.5	1391	4	71	91	2	-2	intron_retention	FALSE	canonical	1	435316	junction_1	222546.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	1954	2334	25.0	-5	True	ATTAAA	-18
PB.11968.8	chrX	+	2759	1	genic	TLR7	novel	NA	NA	NA	NA	-11	-7809	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.11968.5	chrX	+	4813	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-85	283	-85	-283	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	225	3374	30.0	1	True	TATAAA	-20
PB.11968.4	chrX	+	5165	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-74	-80	-74	80	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	214	3363	40.0	0	True	ATTAAA	-22
PB.5134.2	chr17	-	4637	6	full-splice_match	VEZF1	ENST00000581208.1	2321	6	-112	-2204	-5	-8	multi-exon	FALSE	canonical	1	60440	junction_3	47562.087765782526	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	154	1719	30.0	-34	True	ATTAAA	-14
PB.5134.3	chr17	-	3611	6	novel_in_catalog	VEZF1	novel	3948	5	NA	NA	26	-1021	combination_of_known_junctions	FALSE	canonical	1	69782	junction_3	44769.02845673558	NA	4	NA	TRUE	NA	NA	NA	C	coding	527	1584	123	1706	30.0	-3	True	AATAAA	-22
PB.5134.4	chr17	-	3601	6	full-splice_match	VEZF1	ENST00000581208.1	2321	6	-98	-1182	9	-1030	multi-exon	FALSE	canonical	1	60440	junction_3	47562.087765782526	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	140	1705	45.0	-20	True	AATAAA	-13
PB.5134.5	chr17	-	2635	7	novel_not_in_catalog	VEZF1	novel	3948	5	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	5204	junction_5	58339.6026452491	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	383	1921	85.0	-24	True	AATATA	-20
PB.5134.6	chr17	-	2305	6	full-splice_match	VEZF1	ENST00000581208.1	2321	6	16	0	16	0	multi-exon	FALSE	canonical	1	60440	junction_3	47562.087765782526	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	26	1591	85.0	8345	False	AATATA	-20
PB.5134.7	chr17	-	2040	6	full-splice_match	VEZF1	ENST00000581208.1	2321	6	-102	383	5	-383	multi-exon	FALSE	canonical	1	60440	junction_3	47562.087765782526	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	144	1709	35.0	-24	True	AATAAA	-20
PB.7720.9	chr22	-	2534	7	full-splice_match	PISD	ENST00000460723.5	2534	7	-24	24	-18	0	multi-exon	FALSE	canonical	1	137738	junction_4	184554.80906735777	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	685	1437	70.0	-25	True	NA	NA
PB.6178.2	chr19	-	4373	4	full-splice_match	ZNF616	ENST00000600228.5	4335	4	-21	-17	-16	17	multi-exon	FALSE	canonical	1	50178	junction_1	2551.94884135417	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	284	2629	10.0	-1	True	ATTAAA	-18
PB.3467.6	chr14	+	1663	16	incomplete-splice_match	ARID4A	ENST00000395168.7	4051	24	0	21097	0	-8043	3prime_fragment	FALSE	canonical	1	83625	junction_1	33342.22012297455	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1461	203	1663	70.0	-19	True	ATTAAA	-19
PB.6178.5	chr19	-	3046	4	full-splice_match	ZNF616	ENST00000600228.5	4335	4	-21	1310	-16	389	multi-exon	FALSE	canonical	1	50178	junction_1	2551.94884135417	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	284	2629	15.0	-1	True	NA	NA
PB.5688.1	chr19	-	2199	6	full-splice_match	ZNF562	ENST00000453372.6	2111	6	-40	-48	-2	48	multi-exon	FALSE	canonical	1	68221	junction_5	10074.97000293301	NA	1	1	TRUE	NA	NA	NA	C	coding	426	1281	201	1481	5.0	-5	True	NA	NA
PB.6922.1	chr2	+	2138	5	full-splice_match	COQ10B	ENST00000263960.6	2239	5	102	-1	32	1	multi-exon	FALSE	canonical	1	212425	junction_1	74635.46865599492	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	37	753	10.0	-27	True	AATATA	-30
PB.6922.2	chr2	+	2327	5	full-splice_match	COQ10B	ENST00000263960.6	2239	5	98	-186	28	186	multi-exon	FALSE	canonical	1	212425	junction_1	74635.46865599492	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	41	757	30.0	-31	True	AATAAA	-29
PB.6922.3	chr2	+	1953	5	full-splice_match	COQ10B	ENST00000263960.6	2239	5	105	181	35	-181	multi-exon	FALSE	canonical	1	212425	junction_1	74635.46865599492	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	34	750	20.0	-24	True	AATAAA	-21
PB.6045.4	chr19	+	2446	7	novel_in_catalog	ZNF283	novel	5713	7	NA	NA	-6	-65	combination_of_known_junctions	FALSE	canonical	1	16994	junction_6	10630.448554610583	NA	0	NA	TRUE	NA	NA	NA	B	coding	643	1932	323	2254	20.0	3	True	AATATA	-17
PB.9456.9	chr5	+	6515	9	novel_in_catalog	JADE2	novel	567	5	NA	NA	-279	-3	combination_of_known_junctions	FALSE	canonical	1	9316	junction_1	105107.0061556317	NA	4	NA	TRUE	NA	NA	NA	C	coding	751	2256	350	2605	10.0	-6969	False	AATAAA	-16
PB.6045.1	chr19	+	2351	6	novel_in_catalog	ZNF283	novel	5713	7	NA	NA	-7	-65	combination_of_known_junctions	FALSE	canonical	1	16994	junction_5	13567.23565653667	NA	1	NA	TRUE	NA	NA	NA	B	coding	643	1932	228	2159	20.0	-26	True	AATATA	-17
PB.6045.2	chr19	+	4441	8	novel_not_in_catalog	ZNF283	novel	5713	7	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	18702.009240524214	NA	7	1	TRUE	NA	NA	NA	B	coding	587	1764	506	2269	15.0	-18	True	NA	NA
PB.6045.3	chr19	+	4298	7	novel_not_in_catalog	ZNF283	novel	5713	7	NA	NA	-6	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	17593.506349408202	NA	2	NA	TRUE	NA	NA	NA	B	coding	643	1932	187	2118	30.0	15	True	NA	NA
PB.9456.5	chr5	+	6522	12	novel_in_catalog	JADE2	novel	567	5	NA	NA	164	-2	combination_of_known_junctions	FALSE	canonical	1	89263	junction_1	69401.55823125025	NA	4	1	TRUE	NA	NA	NA	C	coding	834	2505	107	2611	10.0	-35	True	AATAAA	-17
PB.9456.4	chr5	+	2718	12	full-splice_match	JADE2	ENST00000282605.8	2748	12	31	-1	15	0	multi-exon	FALSE	canonical	1	6348	junction_1	87110.644509779	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	56	2560	5.0	18	True	AATATA	-20
PB.9456.7	chr5	+	6664	10	novel_in_catalog	JADE2	novel	567	5	NA	NA	-298	-2	combination_of_known_junctions	FALSE	canonical	1	9316	junction_1	91967.04033269503	NA	3	NA	TRUE	NA	NA	NA	C	coding	794	2385	369	2753	10.0	-6988	False	AATAAA	-17
PB.9456.6	chr5	+	2769	12	novel_in_catalog	JADE2	novel	567	5	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	1	35657	junction_1	87525.8259007209	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	110	2611	5.0	-41	False	AATATA	-20
PB.9456.1	chr5	+	2775	12	novel_in_catalog	JADE2	novel	567	5	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	13490	junction_1	85468.10096180053	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	115	2619	10.0	1	True	AATATA	-18
PB.9456.3	chr5	+	3015	12	novel_in_catalog	JADE2	novel	567	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	70184	junction_11	77728.36598104096	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	357	2858	10.0	-14	True	AATATA	-19
PB.7392.1	chr20	-	4385	2	novel_not_in_catalog	AL162457.2	novel	937	2	NA	NA	-15	-10476	any annotated donor/acceptor	FALSE	canonical	1	550	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	18	False	NA	NA
PB.4283.2	chr16	+	1833	6	full-splice_match	COQ7	ENST00000321998.9	2657	6	-10	834	-10	-1	multi-exon	FALSE	canonical	1	74619	junction_1	71686.39389284412	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	77	730	20.0	-428	False	NA	NA
PB.4283.3	chr16	+	4754	6	full-splice_match	COQ7	ENST00000321998.9	2657	6	-1	-2096	-1	2096	multi-exon	FALSE	canonical	1	74619	junction_1	71686.39389284412	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	68	721	40.0	3	True	NA	NA
PB.4283.1	chr16	+	4596	6	full-splice_match	COQ7	ENST00000321998.9	2657	6	-13	-1926	-13	1926	multi-exon	FALSE	canonical	1	74619	junction_1	71686.39389284412	NA	3	NA	TRUE	NA	NA	NA	C	coding	217	654	80	733	90.0	-431	False	NA	NA
PB.4283.6	chr16	+	2575	6	full-splice_match	COQ7	ENST00000321998.9	2657	6	15	67	-12	-67	multi-exon	FALSE	canonical	1	74619	junction_1	71686.39389284412	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	52	705	30.0	0	True	NA	NA
PB.4283.7	chr16	+	2110	6	full-splice_match	COQ7	ENST00000321998.9	2657	6	15	532	-12	301	multi-exon	FALSE	canonical	1	74619	junction_1	71686.39389284412	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	52	705	30.0	0	True	NA	NA
PB.4283.4	chr16	+	4363	6	full-splice_match	COQ7	ENST00000321998.9	2657	6	15	-1721	-12	1721	multi-exon	FALSE	canonical	1	74619	junction_1	71686.39389284412	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	52	705	15.0	0	True	NA	NA
PB.4283.5	chr16	+	4270	7	novel_in_catalog	COQ7	novel	2657	6	NA	NA	-12	1715	combination_of_known_junctions	FALSE	canonical	1	17668	junction_6	95753.65450815267	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	52	705	15.0	0	True	NA	NA
PB.2592.1	chr12	+	2136	13	full-splice_match	SPATS2	ENST00000321898.10	3158	13	-13	1035	0	19	multi-exon	FALSE	canonical	1	68704	junction_1	81989.069746581	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	370	2007	5.0	0	True	AAAAAG	-37
PB.2592.3	chr12	+	2215	14	full-splice_match	SPATS2	ENST00000552918.5	2993	14	-64	842	-16	19	multi-exon	FALSE	canonical	1	74553	junction_1	93731.2107018422	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	449	2086	5.0	-16	True	AAAAAG	-37
PB.2592.2	chr12	+	2770	13	full-splice_match	SPATS2	ENST00000321898.10	3158	13	33	355	-2	-162	multi-exon	FALSE	canonical	1	68704	junction_1	81989.069746581	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	324	1961	60.0	-2	True	NA	NA
PB.2592.5	chr12	+	3218	14	full-splice_match	SPATS2	ENST00000552918.5	2993	14	-11	-214	3	16	multi-exon	FALSE	canonical	1	74553	junction_1	93731.2107018422	NA	2	NA	TRUE	NA	NA	NA	C	coding	545	1638	396	2033	25.0	-11	True	AATAAA	-42
PB.2592.4	chr12	+	2829	14	full-splice_match	SPATS2	ENST00000552918.5	2993	14	2	162	2	-162	multi-exon	FALSE	canonical	1	74553	junction_1	93731.2107018422	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	383	2020	60.0	2	True	NA	NA
PB.2592.7	chr12	+	3120	14	novel_not_in_catalog	SPATS2	novel	675	6	NA	NA	-14	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	112730.00123949088	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	462	2099	25.0	-8	True	AATAAA	-27
PB.2592.6	chr12	+	3211	13	full-splice_match	SPATS2	ENST00000321898.10	3158	13	-32	-21	-19	16	multi-exon	FALSE	canonical	1	68704	junction_1	81989.069746581	NA	2	NA	TRUE	NA	NA	NA	C	coding	545	1638	389	2026	25.0	-19	True	AATAAA	-42
PB.8885.14	chr4	+	4815	23	novel_in_catalog	SMARCAD1	novel	5017	24	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	87000	junction_1	67770.30875730107	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	256	2562	30.0	0	True	AATAAA	-15
PB.3847.1	chr15	+	4729	19	full-splice_match	SEMA6D	ENST00000536845.6	3754	19	-51	-924	-51	-25	multi-exon	FALSE	canonical	1	17748	junction_17	10693.420236237114	NA	1	NA	TRUE	NA	NA	NA	C	coding	1073	3222	436	3657	80.0	-10	True	AGTAAA	-37
PB.9362.7	chr5	-	6018	36	full-splice_match	CHD1	ENST00000614616.4	8095	36	315	1762	315	-15	multi-exon	FALSE	canonical	1	65261	junction_35	79525.67178786368	NA	5	NA	TRUE	NA	NA	NA	C	coding	1710	5133	253	5385	10.0	1	True	ATTAAA	-13
PB.3847.3	chr15	+	5984	18	novel_in_catalog	SEMA6D	novel	6028	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	3850	junction_16	13838.992767916667	NA	4	1	TRUE	NA	NA	NA	C	coding	1067	3204	346	3549	20.0	-25	True	AATAAA	-15
PB.3847.2	chr15	+	5852	18	novel_in_catalog	SEMA6D	novel	6028	20	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	1	11370	junction_17	10949.488331095785	NA	2	NA	TRUE	NA	NA	NA	C	coding	1017	3054	365	3418	20.0	-44	True	AATAAA	-14
PB.8885.16	chr4	+	3063	1	novel_in_catalog	SMARCAD1	novel	5017	24	NA	NA	1	-62771	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.11769.7	chr9	-	3062	6	full-splice_match	RBM18	ENST00000417201.3	4974	6	-19	1931	-19	-1931	multi-exon	FALSE	canonical	1	264840	junction_2	32179.948280878267	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	161	733	25.0	-38	False	AGTAAA	-22
PB.6197.1	chr19	+	1867	4	full-splice_match	ZNF525	ENST00000475179.5	1868	4	1	0	1	0	multi-exon	FALSE	canonical	1	3056	junction_3	12862.583367616666	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-13	True	AATAAA	-19
PB.10407.8	chr7	+	4066	11	incomplete-splice_match	PHF14	ENST00000403050.7	4276	17	54932	-1682	-6781	1655	5prime_fragment	FALSE	canonical	1	82788	junction_10	109323.59994090938	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	118	1227	20.0	-7772	False	AATAAA	-21
PB.10407.9	chr7	+	1951	4	full-splice_match	PHF14	ENST00000470665.5	1005	4	-960	14	-960	-14	multi-exon	FALSE	canonical	1	266280	junction_3	95390.8740114413	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	AATAAA	-8
PB.10051.13	chr6	+	2743	7	novel_not_in_catalog	PHF3	novel	3700	12	NA	NA	10	2	any annotated donor/acceptor	FALSE	canonical	1	2118	junction_2	147986.01740301534	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2211	532	2742	75.0	9	True	NA	NA
PB.10051.12	chr6	+	5148	14	full-splice_match	PHF3	ENST00000515594.5	3074	14	15	-2089	4	-2	multi-exon	FALSE	canonical	1	14075	junction_2	98609.2407550328	NA	5	NA	TRUE	NA	NA	NA	C	coding	1283	3852	553	4404	10.0	-728	False	GATAAA	-14
PB.10051.11	chr6	+	2799	6	full-splice_match	PHF3	ENST00000481385.6	2787	6	-12	0	-9	0	multi-exon	FALSE	canonical	1	98851	junction_1	93383.29019390995	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2439	361	2799	70.0	9	True	NA	NA
PB.10051.10	chr6	+	7235	16	full-splice_match	PHF3	ENST00000262043.7	8233	16	-30	1028	-14	-1	multi-exon	FALSE	canonical	1	66273	junction_1	82768.80252285076	NA	2	NA	TRUE	NA	NA	NA	C	coding	2039	6120	371	6490	15.0	4	True	GATAAA	-15
PB.10407.2	chr7	+	2367	10	incomplete-splice_match	PHF14	ENST00000490957.5	4058	16	-35	26046	0	193	3prime_fragment	FALSE	canonical	1	253770	junction_2	56423.591265391384	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	453	2366	70.0	0	True	AATAGA	-42
PB.10407.3	chr7	+	2631	17	full-splice_match	PHF14	ENST00000423760.6	2627	17	-5	1	-5	-1	multi-exon	FALSE	canonical	1	53105	junction_2	100188.39658293457	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	520	2499	20.0	12	True	AATAAA	-21
PB.10407.1	chr7	+	3421	18	full-splice_match	PHF14	ENST00000634607.1	3407	18	-32	18	0	-11	multi-exon	FALSE	canonical	1	253770	junction_2	69768.12214683862	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2847	453	3299	35.0	0	True	AATAAA	-11
PB.10407.6	chr7	+	1980	14	novel_in_catalog	PHF14	novel	9869	16	NA	NA	16831	-14	no_combination_of_known_junctions	FALSE	canonical	1	23297	junction_11	105867.7014053487	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	11	1861	45.0	8219	False	AATAAA	-8
PB.8246.1	chr3	-	3258	15	full-splice_match	PROS1	ENST00000394236.8	3583	15	244	81	-12	-5	multi-exon	FALSE	canonical	1	89731	junction_13	48419.75626392767	NA	17	3	TRUE	NA	NA	NA	C	coding	676	2031	97	2127	40.0	50	True	AATAAA	-15
PB.9703.1	chr6	-	1744	4	full-splice_match	TUBB2A	ENST00000489942.1	817	4	-18	-909	-18	-1	multi-exon	FALSE	canonical	1	19734	junction_1	789492.890821697	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	469	1551	20.0	-1	True	AATAAA	-14
PB.5848.1	chr19	+	1134	4	full-splice_match	REX1BD	ENST00000597371.1	1081	4	-44	-9	-31	0	multi-exon	FALSE	canonical	1	618083	junction_2	57974.994991135805	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	337	978	10.0	-5	True	AATAAA	-16
PB.5848.2	chr19	+	2271	3	full-splice_match	REX1BD	ENST00000600997.5	2275	3	4	0	0	0	multi-exon	FALSE	canonical	1	618083	junction_2	69177.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	300	872	10.0	4	True	AATAAA	-16
PB.11883.6	chr9	-	1622	8	full-splice_match	REXO4	ENST00000371942.7	2360	8	20	718	20	226	multi-exon	FALSE	canonical	1	44397	junction_7	134153.0224593527	NA	3	NA	TRUE	NA	NA	NA	C	coding	422	1269	181	1449	20.0	-15	True	NA	NA
PB.10494.1	chr7	+	3459	3	novel_not_in_catalog	TRG-AS1	novel	3645	4	NA	NA	17660	-1	any annotated donor/acceptor	FALSE	canonical	1	3620	junction_1	7846.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	101	306	2398	2703	30.0	9197	False	NA	NA
PB.11859.1	chr9	-	3346	2	full-splice_match	FAM78A	ENST00000372271.3	3966	2	565	55	565	-55	multi-exon	FALSE	canonical	1	142722	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	207	624	32	655	75.0	-6	True	AATGAA	-16
PB.12354.9	chrX	-	1998	2	full-splice_match	SLC10A3	ENST00000263512.5	2161	2	34	129	7	-92	multi-exon	FALSE	canonical	1	236152	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	493	1926	35.0	-1	True	NA	NA
PB.12354.8	chrX	-	2044	3	incomplete-splice_match	SLC10A3	ENST00000369649.8	1763	4	-53	7	-4	-2	intron_retention	FALSE	canonical	1	37327	junction_1	99412.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	504	1850	15.0	-12	True	AATAAA	-11
PB.12354.7	chrX	-	2123	2	full-splice_match	SLC10A3	ENST00000263512.5	2161	2	31	7	4	-2	multi-exon	FALSE	canonical	1	236152	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	496	1929	15.0	-4	True	AATAAA	-11
PB.12354.6	chrX	-	3733	5	novel_not_in_catalog	UBL4A	novel	2382	4	NA	NA	-3986	-267	intron_retention	FALSE	canonical	1	2111	junction_3	182980.86280674272	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	493	2178	30.0	-1	True	AATAAA	-17
PB.12354.5	chrX	-	1985	4	full-splice_match	UBL4A	ENST00000369660.8	2382	4	56	341	1	225	multi-exon	FALSE	canonical	1	343759	junction_3	50680.769214981556	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	31	504	45.0	0	True	ATTAAA	-29
PB.12354.4	chrX	-	2339	3	novel_in_catalog	UBL4A	novel	2382	4	NA	NA	-27	-263	intron_retention	FALSE	canonical	1	343759	junction_2	61341.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	346	780	30.0	4013	False	AATAAA	-21
PB.12354.2	chrX	-	2327	4	full-splice_match	UBL4A	ENST00000369660.8	2382	4	53	2	-2	-2	multi-exon	FALSE	canonical	1	343759	junction_3	50680.769214981556	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	34	507	25.0	-3	True	AATAAA	-20
PB.12354.1	chrX	-	2587	3	novel_in_catalog	UBL4A	novel	2382	4	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	343759	junction_2	61341.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	333	767	25.0	-15	True	AATAAA	-20
PB.226.3	chr1	+	3316	15	novel_in_catalog	PHACTR4	novel	597	5	NA	NA	-49	-16	combination_of_known_junctions	TRUE	canonical	1	14819	junction_3	97357.85283453524	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	204	2336	100.0	-80	True	NA	NA
PB.5360.1	chr18	+	1781	1	antisense	novelGene_ENOSF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-9276	False	NA	NA
PB.226.4	chr1	+	3257	14	full-splice_match	PHACTR4	ENST00000373839.7	6190	14	93	2840	-14	-16	multi-exon	FALSE	canonical	1	74175	junction_2	76093.06284120922	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	169	2277	100.0	-45	True	NA	NA
PB.226.5	chr1	+	3420	15	novel_in_catalog	PHACTR4	novel	597	5	NA	NA	4	141	combination_of_known_junctions	FALSE	canonical	1	14819	junction_3	97357.85283453524	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	151	2283	95.0	-27	True	NA	NA
PB.8497.13	chr3	+	2431	8	incomplete-splice_match	SMC4	ENST00000462787.5	5033	22	-17	19490	0	0	3prime_fragment	FALSE	canonical	1	296672	junction_1	169183.81949036065	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1254	1177	2430	70.0	1	True	AGTAAA	-26
PB.1884.8	chr11	-	1795	5	full-splice_match	CD59	ENST00000351554.8	678	5	14	-1131	14	5	multi-exon	FALSE	canonical	1	495883	junction_4	1876937.2912570895	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	148	534	30.0	-3	True	NA	NA
PB.8497.11	chr3	+	1365	9	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	341	20462	2	0	3prime_fragment	FALSE	canonical	1	293192	junction_1	180693.94851096807	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1254	111	1364	70.0	-5	True	AGTAAA	-26
PB.8497.10	chr3	+	5134	24	full-splice_match	SMC4	ENST00000357388.7	5471	24	333	4	-1	4	multi-exon	FALSE	canonical	1	293192	junction_1	207171.06270986903	NA	0	NA	TRUE	NA	NA	NA	C	coding	1288	3867	119	3985	40.0	-13	True	AATAAA	-22
PB.8497.17	chr3	+	4446	1	novel_in_catalog	SMC4	novel	5471	24	NA	NA	321	-2699	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-9650	False	NA	NA
PB.8497.16	chr3	+	4845	23	novel_in_catalog	SMC4	novel	708	6	NA	NA	7	-11	no_combination_of_known_junctions	FALSE	canonical	1	15326	junction_10	250523.72798086776	NA	0	NA	TRUE	NA	NA	NA	C	coding	1210	3633	80	3712	60.0	-4787	False	AATAAA	-6
PB.2921.9	chr12	+	4564	10	full-splice_match	OAS2	ENST00000392583.6	4734	10	174	-4	-14	-1	multi-exon	FALSE	canonical	1	261282	junction_3	61403.28317397377	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	34	2097	20.0	-4	True	NA	NA
PB.2601.7	chr12	-	3250	18	novel_not_in_catalog	RACGAP1	novel	387	3	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	150657.27924096686	NA	21	1	TRUE	NA	NA	NA	C	coding	632	1899	254	2152	40.0	0	True	AGTAAA	-11
PB.2921.7	chr12	+	1985	2	full-splice_match	OAS2	ENST00000449768.2	2072	2	86	1	-22	-1	multi-exon	FALSE	canonical	1	355551	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	42	560	20.0	-12	True	NA	NA
PB.2921.6	chr12	+	2179	10	full-splice_match	OAS2	ENST00000392583.6	4734	10	178	2377	-10	-1875	multi-exon	FALSE	canonical	1	261282	junction_3	61403.28317397377	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	30	2093	50.0	0	True	NA	NA
PB.3742.11	chr15	+	2002	4	incomplete-splice_match	FAN1	ENST00000565280.5	4999	16	25288	9	776	-9	5prime_fragment	FALSE	canonical	1	123100	junction_2	37836.72338115739	NA	1	NA	TRUE	NA	NA	NA	C	coding	30	93	373	465	45.0	NA	False	AATAAA	-16
PB.3742.10	chr15	+	3754	15	novel_in_catalog	FAN1	novel	2738	4	NA	NA	4	-1107	combination_of_known_junctions	FALSE	canonical	1	30927	junction_1	38017.842116617845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	265	3315	25.0	1	True	AATGAA	-16
PB.2921.3	chr12	+	3465	11	full-splice_match	OAS2	ENST00000342315.8	3613	11	147	1	2	-1	multi-exon	FALSE	canonical	1	30890	junction_10	111976.18510361922	NA	3	NA	TRUE	NA	NA	NA	C	coding	719	2160	68	2227	20.0	-7	True	NA	NA
PB.2921.2	chr12	+	2925	11	full-splice_match	OAS2	ENST00000342315.8	3613	11	181	507	-14	0	multi-exon	FALSE	canonical	1	30890	junction_10	111976.18510361922	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	34	2193	15.0	-4	True	NA	NA
PB.2921.1	chr12	+	4073	10	full-splice_match	OAS2	ENST00000392583.6	4734	10	159	502	21	0	multi-exon	FALSE	canonical	1	261282	junction_3	61403.28317397377	NA	2	NA	TRUE	NA	NA	NA	C	coding	687	2064	49	2112	15.0	-19	False	NA	NA
PB.2273.9	chr11	-	1871	5	full-splice_match	POU2AF1	ENST00000393067.7	3295	5	417	1007	0	-1007	multi-exon	FALSE	canonical	1	325693	junction_2	38121.87236023435	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	99	869	20.0	-1	True	AATAAA	-20
PB.2273.8	chr11	-	3051	6	novel_in_catalog	POU2AF1	novel	3295	5	NA	NA	-100	-6	combination_of_known_junctions	FALSE	canonical	1	9262	junction_5	177365.59777859968	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	218	1048	20.0	-101	False	AATAAA	-11
PB.6479.1	chr2	-	2967	1	antisense	novelGene_VRK2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	120	False	NA	NA
PB.10766.24	chr7	-	1504	3	incomplete-splice_match	LHFPL3-AS1	ENST00000434579.6	1034	5	-15	2342	-15	535	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-24	True	AGTAAA	-33
PB.4392.5	chr16	+	1885	11	full-splice_match	BCKDK	ENST00000394950.7	1997	11	111	1	-44	0	multi-exon	FALSE	canonical	1	406263	junction_1	167566.44565786433	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	253	1350	0.0	1	True	ATTAAA	-19
PB.4392.4	chr16	+	1795	12	full-splice_match	BCKDK	ENST00000219794.10	2128	12	110	223	-45	1	multi-exon	FALSE	canonical	1	406263	junction_1	172566.94807595087	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	254	1492	0.0	0	True	ATTAAA	-21
PB.2273.3	chr11	-	2872	5	full-splice_match	POU2AF1	ENST00000393067.7	3295	5	417	6	0	-6	multi-exon	FALSE	canonical	1	325693	junction_2	38121.87236023435	NA	5	NA	TRUE	NA	NA	NA	C	coding	256	771	99	869	20.0	-1	True	AATAAA	-11
PB.4392.6	chr16	+	2170	10	novel_in_catalog	BCKDK	novel	2164	13	NA	NA	-37	-1	intron_retention	FALSE	canonical	1	406263	junction_1	172693.6739868074	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	839	1636	0.0	8	True	ATTAAA	-18
PB.4392.1	chr16	+	2032	12	full-splice_match	BCKDK	ENST00000219794.10	2128	12	93	3	-62	-3	multi-exon	FALSE	canonical	1	406263	junction_1	172566.94807595087	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	271	1509	25.0	-17	True	NA	NA
PB.2273.7	chr11	-	2537	6	novel_not_in_catalog	POU2AF1	novel	3295	5	NA	NA	3	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	156528.6986908152	NA	4	NA	TRUE	NA	NA	NA	C	coding	328	987	96	1082	5.0	2	True	AATAAA	-16
PB.4392.2	chr16	+	2405	9	novel_in_catalog	BCKDK	novel	2164	13	NA	NA	-47	0	intron_retention	FALSE	canonical	1	406263	junction_1	184009.4207007059	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	256	936	0.0	-2	True	ATTAAA	-19
PB.11185.18	chr8	-	3809	10	novel_in_catalog	STAU2	novel	2646	12	NA	NA	-1	-5	no_combination_of_known_junctions	FALSE	canonical	1	1792	junction_7	99214.44695540395	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	393	1412	45.0	581	False	AGTAAA	-18
PB.11910.1	chr9	-	2727	2	full-splice_match	SNHG7	ENST00000447221.1	2157	2	4	-574	4	0	multi-exon	FALSE	canonical	1	369963	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	114	345	2291	2635	35.0	3	True	ATTAAA	-12
PB.10976.5	chr8	+	4452	7	full-splice_match	ERI1	ENST00000250263.7	4615	7	115	48	-10	-47	multi-exon	FALSE	canonical	1	154351	junction_1	25092.211793037826	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	146	1195	45.0	22	True	NA	NA
PB.4970.3	chr17	-	2346	10	novel_in_catalog	SMARCE1	novel	6196	11	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	1533	junction_9	307177.7453749772	NA	2	1	TRUE	NA	NA	NA	C	coding	393	1182	113	1294	85.0	-20	True	NA	NA
PB.4970.2	chr17	-	2467	12	full-splice_match	SMARCE1	ENST00000644701.1	2488	12	10	11	0	5	multi-exon	FALSE	canonical	1	67995	junction_1	241595.88789851344	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	101	1192	85.0	-10	True	NA	NA
PB.4970.1	chr17	-	3221	11	full-splice_match	SMARCE1	ENST00000348513.11	6196	11	204	2771	-6	5	multi-exon	FALSE	canonical	1	139411	junction_8	268968.25135099125	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	934	2169	85.0	-7	True	NA	NA
PB.9130.3	chr5	+	2857	3	antisense	novelGene_AC010451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4285	junction_1	141.5	NA	0	NA	FALSE	NA	NA	NA	B	coding	84	255	56	310	30.0	NA	False	ATTAAA	-23
PB.4970.7	chr17	-	1349	11	full-splice_match	SMARCE1	ENST00000348513.11	6196	11	1012	3835	0	-12	multi-exon	FALSE	canonical	1	139411	junction_8	268968.25135099125	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1224	126	1349	50.0	-35	True	NA	NA
PB.4970.6	chr17	-	6303	10	novel_in_catalog	SMARCE1	novel	6196	11	NA	NA	0	59	intron_retention	FALSE	canonical	1	139411	junction_7	283157.38329691417	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	5210	6235	20.0	-27	True	AATGAA	-26
PB.4970.5	chr17	-	2049	11	full-splice_match	SMARCE1	ENST00000348513.11	6196	11	1025	3122	0	25	multi-exon	FALSE	canonical	1	139411	junction_8	268968.25135099125	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	113	1348	50.0	-22	True	NA	NA
PB.1153.5	chr1	+	2604	5	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-23	1657	any annotated donor/acceptor	FALSE	canonical	1	148	junction_2	2277.3127118382313	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-27	True	ATTAAA	-14
PB.4970.9	chr17	-	2157	4	full-splice_match	SMARCE1	ENST00000474246.2	2156	4	4	-5	0	5	multi-exon	FALSE	canonical	1	139411	junction_1	193025.4058171848	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-25	True	AATAAA	-21
PB.4970.8	chr17	-	3286	4	full-splice_match	SMARCE1	ENST00000474246.2	2156	4	-6	-1124	0	1124	multi-exon	FALSE	canonical	1	139411	junction_1	193025.4058171848	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-35	True	ATTAAA	-18
PB.1153.4	chr1	+	2279	3	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-30	1659	no_combination_of_known_junctions	FALSE	canonical	1	111	junction_1	2162.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-34	True	ATTAAA	-16
PB.9291.1	chr5	+	4803	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	2	-1118	0	-290	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	254	1810	25.0	-30	True	AAAACA	-20
PB.9291.2	chr5	+	1921	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	0	1766	0	4	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	256	1812	25.0	-32	True	ATTAAA	-19
PB.1362.29	chr10	-	3403	16	full-splice_match	ITGB1	ENST00000302278.7	3640	16	-37	274	-14	-274	multi-exon	FALSE	canonical	1	381	junction_3	1886954.2506506746	NA	2	NA	TRUE	NA	NA	NA	C	coding	798	2397	103	2499	20.0	-27	True	NA	NA
PB.9291.4	chr5	+	3663	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	33	-9	1	9	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	223	1779	45.0	1	True	AATAAA	-30
PB.9291.5	chr5	+	2231	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	2	1454	0	1	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	254	1810	35.0	-30	True	AAAACA	-11
PB.9291.6	chr5	+	5045	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	13	-1371	0	-37	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	243	1799	60.0	-19	True	AATGAA	-21
PB.9291.7	chr5	+	2023	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	2	1662	0	108	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	254	1810	35.0	-30	True	NA	NA
PB.1362.22	chr10	-	3832	16	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-69	-8	any annotated donor/acceptor	FALSE	canonical	1	381	junction_3	2052799.3587241683	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	266	2662	25.0	-3	True	ATTAAA	-17
PB.1362.23	chr10	-	3743	17	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-14	-8	any annotated donor/acceptor	FALSE	canonical	1	381	junction_3	2135241.788329248	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	177	2573	25.0	-27	True	ATTAAA	-17
PB.1362.21	chr10	-	3953	18	novel_in_catalog	ITGB1	novel	3729	16	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	1	381	junction_3	2188426.396985817	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	387	2783	25.0	-10	True	ATTAAA	-17
PB.1362.24	chr10	-	3682	17	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	2	-8	any annotated donor/acceptor	FALSE	canonical	1	381	junction_3	2135529.499915337	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	89	2512	25.0	-11	True	ATTAAA	-17
PB.10211.16	chr6	-	3505	16	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1629	junction_15	168934.0372845633	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	651	2252	20.0	-26	False	AATAAA	-15
PB.1884.6	chr11	-	1892	4	full-splice_match	CD59	ENST00000642928.1	7631	4	67	5672	1	188	multi-exon	FALSE	canonical	1	1660115	junction_3	1407304.2109518785	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	62	448	20.0	-2	True	AATAGA	-16
PB.8784.11	chr4	+	1930	6	full-splice_match	TMEM165	ENST00000381334.9	1928	6	1	-3	1	3	multi-exon	FALSE	canonical	1	427291	junction_1	311218.0091038435	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	233	1207	0.0	1	True	AATAAA	-17
PB.1884.7	chr11	-	1672	4	full-splice_match	CD59	ENST00000642928.1	7631	4	68	5891	0	-31	multi-exon	FALSE	canonical	1	1660115	junction_3	1407304.2109518785	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	61	447	55.0	-1	True	NA	NA
PB.1943.10	chr11	-	2147	15	novel_not_in_catalog	SSRP1	novel	2819	17	NA	NA	-2	-553	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	678055.5298031855	NA	7	NA	TRUE	NA	NA	NA	C	coding	624	1872	276	2147	25.0	-12	True	AAAAAG	-45
PB.8058.3	chr3	+	2494	3	full-splice_match	ZNF35	ENST00000453164.1	581	3	-18	-1895	0	1	multi-exon	FALSE	canonical	1	2654	junction_1	7993.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	548	1651	10.0	-15	True	AATAAA	-22
PB.9337.55	chr5	-	1978	1	novel_in_catalog	MEF2C	novel	6192	12	NA	NA	30	-758	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	20	True	TATAAA	-32
PB.712.3	chr1	-	3507	13	full-splice_match	SV2A	ENST00000369146.7	4416	13	39	870	-2	-870	multi-exon	FALSE	canonical	1	107227	junction_6	75665.62097184928	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	453	2681	30.0	0	True	NA	NA
PB.11966.3	chrX	+	6094	8	full-splice_match	MSL3	ENST00000647701.1	3251	8	-11	-2832	-11	2	multi-exon	FALSE	canonical	1	134288	junction_7	102233.84437770546	NA	6	NA	TRUE	NA	NA	NA	C	coding	297	894	44	937	40.0	2	True	NA	NA
PB.11966.2	chrX	+	2215	13	full-splice_match	MSL3	ENST00000312196.9	2364	13	148	1	39	-1	multi-exon	FALSE	canonical	1	134288	junction_7	90652.38038181287	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	456	1523	5.0	-6477	False	AATAAA	-39
PB.11966.1	chrX	+	3456	9	full-splice_match	MSL3	ENST00000337339.7	3480	9	24	0	1	0	multi-exon	FALSE	canonical	1	134288	junction_7	96167.36452721045	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	56	1288	10.0	-10	True	AATAAA	-19
PB.11966.7	chrX	+	3465	8	full-splice_match	MSL3	ENST00000649851.1	3426	8	-12	-27	0	0	multi-exon	FALSE	canonical	1	134288	junction_6	94658.68498980957	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	545	1297	10.0	-2	True	AATAAA	-19
PB.4226.8	chr16	-	3614	15	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	7433	junction_4	185279.9447737732	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	23	1582	15.0	0	True	AATAAA	-18
PB.11966.5	chrX	+	2290	12	full-splice_match	MSL3	ENST00000649078.1	2507	12	211	6	1	0	multi-exon	FALSE	canonical	1	134288	junction_6	92072.88277166247	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	555	1622	50.0	-8750	False	AATAAA	-15
PB.11966.4	chrX	+	3521	9	incomplete-splice_match	MSL3	ENST00000398527.7	2329	13	14	7749	-12	0	3prime_fragment	FALSE	canonical	1	9137	junction_1	127233.22104284518	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	139	1353	10.0	-9815	False	AATAAA	-19
PB.4226.5	chr16	-	3855	16	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	21379	junction_5	178216.75161206245	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	1239	1823	15.0	-22	True	AATAAA	-18
PB.4226.4	chr16	-	2836	17	novel_not_in_catalog	GLYR1	novel	3606	14	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178755.92974779886	NA	6	1	TRUE	NA	NA	NA	C	coding	553	1662	33	1694	10.0	-10	True	AATAAA	-19
PB.4226.7	chr16	-	3655	15	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	58926	junction_8	194437.18339696998	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	31	1623	15.0	-8	True	AATAAA	-18
PB.4226.6	chr16	-	3684	15	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	58926	junction_8	171572.3590815733	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	42	1652	15.0	-19	True	AATAAA	-18
PB.4226.1	chr16	-	3725	16	full-splice_match	GLYR1	ENST00000591451.5	1831	16	-43	-1851	-20	5	multi-exon	FALSE	canonical	1	72836	junction_6	163981.95522055333	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	44	1687	10.0	-21	True	AATAAA	-24
PB.4226.3	chr16	-	3295	17	novel_not_in_catalog	GLYR1	novel	3606	14	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1990	junction_1	196917.23343668875	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	24	1667	10.0	-1	True	AATAAA	-19
PB.4226.2	chr16	-	3718	16	full-splice_match	GLYR1	ENST00000321919.13	3772	16	55	-1	1	1	multi-exon	FALSE	canonical	1	257539	junction_9	136798.80262237517	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	23	1684	10.0	0	True	AATAAA	-20
PB.8183.11	chr3	+	2734	11	novel_not_in_catalog	IL17RB	novel	2010	11	NA	NA	-12	4	any annotated donor/acceptor	FALSE	canonical	1	12327	junction_8	38143.717904787416	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	22	888	35.0	0	True	AATAAA	-13
PB.8183.10	chr3	+	2806	12	novel_not_in_catalog	IL17RB	novel	2010	11	NA	NA	-12	4	any annotated donor/acceptor	FALSE	canonical	1	1576	junction_6	49526.985368776564	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	1740	2522	35.0	0	True	AATAAA	-13
PB.8183.13	chr3	+	2599	11	novel_not_in_catalog	IL17RB	novel	2010	11	NA	NA	-12	-131	any annotated donor/acceptor	FALSE	canonical	1	12327	junction_8	38143.717904787416	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	22	888	40.0	0	True	AATAAA	-16
PB.7314.1	chr20	+	2753	4	full-splice_match	SYS1	ENST00000243918.9	2862	4	107	2	-4	-2	multi-exon	TRUE	canonical	1	117164	junction_1	104000.12524778783	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	185	655	15.0	-26	True	NA	NA
PB.8183.15	chr3	+	2015	11	full-splice_match	IL17RB	ENST00000288167.7	2010	11	-12	7	-12	-7	multi-exon	FALSE	canonical	1	50539	junction_8	31635.732641429375	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	22	1530	35.0	0	True	AATAAA	-13
PB.8183.14	chr3	+	2606	10	novel_not_in_catalog	IL17RB	novel	2010	11	NA	NA	-12	4	any annotated donor/acceptor	FALSE	canonical	1	3272	junction_3	47519.86124886216	NA	17	2	TRUE	NA	NA	NA	C	coding	260	783	1540	2322	35.0	0	True	AATAAA	-13
PB.8183.16	chr3	+	2707	10	novel_not_in_catalog	IL17RB	novel	2010	11	NA	NA	-10	4	intron_retention	FALSE	canonical	1	6562	junction_9	39894.30464534759	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	20	886	35.0	2	True	AATAAA	-13
PB.484.8	chr1	-	4238	23	novel_in_catalog	USP33	novel	4327	24	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	1	31823	junction_2	119330.50301980076	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	304	2742	40.0	-25	False	AATAAA	-17
PB.1222.4	chr1	+	1719	7	full-splice_match	GPR137B	ENST00000366592.7	2042	7	-27	350	0	77	multi-exon	FALSE	canonical	1	179295	junction_2	26349.71644639759	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	164	1318	35.0	0	True	AATATA	-26
PB.11107.2	chr8	-	7914	17	full-splice_match	KAT6A	ENST00000265713.7	9192	17	2	1276	2	6	multi-exon	FALSE	canonical	1	135469	junction_16	49069.93890321083	NA	0	NA	TRUE	NA	NA	NA	C	coding	2004	6015	450	6464	100.0	457	False	NA	NA
PB.11107.3	chr8	-	8018	18	full-splice_match	KAT6A	ENST00000396930.4	8006	18	-7	-5	-3	5	multi-exon	FALSE	canonical	1	75655	junction_16	60879.09225550814	NA	3	NA	TRUE	NA	NA	NA	C	coding	2004	6015	555	6569	95.0	484	False	NA	NA
PB.11107.4	chr8	-	6739	17	full-splice_match	KAT6A	ENST00000265713.7	9192	17	39	2414	0	-1131	multi-exon	FALSE	canonical	1	135469	junction_16	49069.93890321083	NA	3	NA	TRUE	NA	NA	NA	C	coding	2004	6015	413	6427	30.0	-1	True	ATTAAA	-25
PB.11107.5	chr8	-	4613	18	full-splice_match	KAT6A	ENST00000396930.4	8006	18	3	3390	0	249	multi-exon	FALSE	canonical	1	75655	junction_16	60879.09225550814	NA	2	NA	TRUE	NA	NA	NA	C	coding	1356	4068	545	4612	55.0	-1	True	NA	NA
PB.11107.6	chr8	-	3984	18	full-splice_match	KAT6A	ENST00000396930.4	8006	18	1	4021	1	7	multi-exon	FALSE	canonical	1	75655	junction_16	60879.09225550814	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3438	547	3984	55.0	-3	True	NA	NA
PB.11107.7	chr8	-	3850	17	full-splice_match	KAT6A	ENST00000265713.7	9192	17	39	5303	0	7	multi-exon	FALSE	canonical	1	135469	junction_16	49069.93890321083	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3438	413	3850	55.0	-1	True	NA	NA
PB.7822.2	chr22	-	568	3	full-splice_match	SNU13	ENST00000215956.10	877	3	199	110	33	0	multi-exon	FALSE	canonical	1	767598	junction_2	837383.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	66	452	20.0	28	True	TATAAA	-10
PB.7047.6	chr2	+	2373	8	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	-2	625	no_combination_of_known_junctions	FALSE	canonical	1	1653	junction_1	82721.12007368432	NA	3	1	TRUE	NA	NA	NA	C	coding	315	948	422	1369	35.0	-6	True	AATAAA	-12
PB.9909.4	chr6	-	4606	2	full-splice_match	HLA-DMB	ENST00000498020.1	4569	2	-40	3	-40	-3	multi-exon	FALSE	canonical	1	458900	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	218	649	5.0	3	True	AATAAA	-17
PB.9909.5	chr6	-	4100	4	novel_in_catalog	HLA-DMB	novel	1746	3	NA	NA	40	-3	intron_retention	TRUE	canonical	1	458900	junction_3	19215.542395559787	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	224	655	5.0	-3	True	AATAAA	-17
PB.9909.6	chr6	-	3381	3	incomplete-splice_match	AL645941.2	ENST00000429234.1	612	4	12089	-2725	12089	2725	5prime_fragment	FALSE	canonical	1	458900	junction_2	30129.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	216	651	227	877	25.0	-6	True	AATAAA	-10
PB.9909.7	chr6	-	3044	4	novel_in_catalog	HLA-DMB	novel	1746	3	NA	NA	20	-10	intron_retention	FALSE	canonical	1	458900	junction_3	24627.877375039854	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	244	894	25.0	-23	True	AATAAA	-10
PB.9909.1	chr6	-	3146	4	novel_not_in_catalog	HLA-DMB	novel	1746	3	NA	NA	22	5565	any annotated donor/acceptor	FALSE	canonical	1	3354	junction_1	230267.22425526005	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	242	868	20.0	-21	True	NA	NA
PB.9909.2	chr6	-	2860	4	novel_not_in_catalog	HLA-DMB	novel	1746	3	NA	NA	33	5290	any annotated donor/acceptor	FALSE	canonical	1	3354	junction_1	230267.22425526005	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	231	857	15.0	-10	True	NA	NA
PB.9909.3	chr6	-	1279	6	full-splice_match	HLA-DMB	ENST00000418107.2	1397	6	108	10	22	-10	multi-exon	FALSE	canonical	1	358444	junction_3	57590.98545293352	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	156	947	25.0	3	True	AATAAA	-10
PB.6786.27	chr2	-	3099	12	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_8	398294.8766154904	NA	5	1	TRUE	NA	NA	NA	B	coding	304	912	2187	3098	80.0	-7	True	TATAAA	-11
PB.6786.25	chr2	-	1380	12	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	24	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	384899.73479338293	NA	3	1	TRUE	NA	NA	NA	B	coding	210	630	750	1379	80.0	1	True	TATAAA	-11
PB.7822.1	chr22	-	1451	3	full-splice_match	SNU13	ENST00000401959.6	1458	3	1	6	1	-5	multi-exon	FALSE	canonical	1	1892527	junction_2	274918.5	NA	14	NA	TRUE	NA	NA	NA	C	coding	128	387	71	457	30.0	0	True	AATAAA	-15
PB.6786.23	chr2	-	2278	20	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	17	487	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	277863.0507997014	NA	4	1	TRUE	NA	NA	NA	B	coding	549	1647	631	2277	65.0	-6	True	NA	NA
PB.6786.22	chr2	-	2459	22	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	0	-1203	any annotated donor/acceptor	FALSE	canonical	0	0	junction_18	268882.46628470765	NA	4	1	TRUE	NA	NA	NA	B	coding	602	1806	652	2457	65.0	-1	True	NA	NA
PB.6786.21	chr2	-	2563	22	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	18	-1203	any annotated donor/acceptor	FALSE	canonical	0	0	junction_18	317598.5906271813	NA	4	2	TRUE	NA	NA	NA	B	coding	602	1806	756	2561	65.0	-5	True	NA	NA
PB.6786.20	chr2	-	2517	23	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	22	-1036	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	262700.44612001115	NA	16	2	TRUE	NA	NA	NA	B	coding	630	1890	626	2515	75.0	-1	True	TATAAA	-6
PB.6786.28	chr2	-	2861	11	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_8	403683.1406848198	NA	3	1	TRUE	NA	NA	NA	B	coding	304	912	1949	2860	80.0	-7	True	TATAAA	-11
PB.7262.16	chr20	-	2208	18	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	61045	junction_15	480631.0307668163	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	400	2013	20.0	1	True	AATAAA	-15
PB.7262.17	chr20	-	1938	16	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	262291	junction_15	357069.59645439807	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	130	1743	20.0	1	True	AATAAA	-15
PB.7262.14	chr20	-	2428	15	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	337743	junction_14	353275.8852793712	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	144	1430	20.0	-3	True	AATAAA	-15
PB.7262.15	chr20	-	2228	18	novel_not_in_catalog	CPNE1	novel	2147	18	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	8733	junction_2	561947.7018183088	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	371	1639	20.0	-2	True	AATAAA	-15
PB.7262.12	chr20	-	1759	16	full-splice_match	CPNE1	ENST00000397442.5	1695	16	-43	-21	-2	-1	multi-exon	FALSE	canonical	1	53636	junction_1	486504.35488641716	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	118	1563	15.0	13	False	AATAAA	-16
PB.7262.13	chr20	-	3887	18	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	26029	junction_15	485839.1521469193	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	2421	3692	20.0	-4	True	AATAAA	-15
PB.7262.10	chr20	-	1925	16	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	1	22973	junction_15	408597.0972978094	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	116	1729	15.0	-62	False	AATAAA	-16
PB.7262.11	chr20	-	1880	15	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	128744	junction_11	480378.93558455707	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	143	1684	15.0	-2	True	AATAAA	-16
PB.1222.9	chr1	+	1734	8	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	-6	-35	any annotated donor/acceptor	FALSE	canonical	1	9648	junction_7	94848.98145247228	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	143	1237	10.0	-27	False	TATAAA	-39
PB.297.11	chr1	-	2511	2	full-splice_match	GNL2	ENST00000488496.1	539	2	-11	-1961	-11	-745	multi-exon	FALSE	canonical	1	506710	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-12	True	NA	NA
PB.1117.21	chr1	-	1704	8	full-splice_match	ANGEL2	ENST00000360506.6	4323	8	40	2579	40	-32	multi-exon	FALSE	canonical	1	26801	junction_7	65193.08371041724	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	297	1424	35.0	-2	True	AGTAAA	-17
PB.7262.18	chr20	-	1933	16	full-splice_match	CPNE1	ENST00000401607.6	1795	16	-29	-109	-5	-6	multi-exon	FALSE	canonical	1	4760	junction_2	495891.4736775197	NA	2	NA	TRUE	NA	NA	NA	C	coding	427	1284	106	1389	25.0	-7	True	AATAAA	-11
PB.7262.19	chr20	-	6611	3	full-splice_match	RBM12	ENST00000374114.7	6662	3	10	41	-6	-41	multi-exon	FALSE	canonical	1	290176	junction_2	172395.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	255	3053	60.0	-7	True	AATAAA	-7
PB.11855.1	chr9	+	1573	1	genic	ABL1	novel	NA	NA	NA	NA	-938	-139542	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-64	False	AATAAA	-12
PB.1403.7	chr10	-	2991	4	incomplete-splice_match	TMEM273	ENST00000453436.5	730	5	-76	3154	3	1426	3prime_fragment	FALSE	canonical	1	6733	junction_1	37096.79692372375	NA	1	NA	TRUE	NA	NA	NA	C	coding	90	273	53	325	30.0	2	True	NA	NA
PB.1403.6	chr10	-	2595	5	novel_in_catalog	TMEM273	novel	1971	7	NA	NA	-2	-9	intron_retention	FALSE	canonical	1	49627	junction_2	15027.682961371656	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	58	426	20.0	-3	True	AATAAA	-15
PB.1403.5	chr10	-	2734	6	novel_in_catalog	TMEM273	novel	1971	7	NA	NA	1	-9	intron_retention	FALSE	canonical	1	1738	junction_3	37581.18548103559	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	40	408	20.0	-5	True	AATAAA	-15
PB.1403.4	chr10	-	3151	5	novel_in_catalog	TMEM273	novel	1971	7	NA	NA	3	-9	intron_retention	FALSE	canonical	1	5517	junction_2	32775.47814582573	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	53	421	20.0	2	True	AATAAA	-15
PB.1403.3	chr10	-	6743	4	novel_in_catalog	TMEM273	novel	1971	7	NA	NA	2	-9	intron_retention	FALSE	canonical	1	66007	junction_1	9350.777186950825	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	63	431	20.0	-8	True	AATAAA	-15
PB.1403.2	chr10	-	1512	5	novel_in_catalog	TMEM273	novel	1971	7	NA	NA	-13	-9	combination_of_known_junctions	FALSE	canonical	1	6733	junction_2	32265.52177925378	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	78	353	20.0	-23	False	AATAAA	-15
PB.1403.1	chr10	-	1527	6	full-splice_match	TMEM273	ENST00000474718.5	614	6	-32	-881	0	-3	multi-exon	FALSE	canonical	1	49627	junction_2	13578.017107074214	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	56	373	20.0	-1	True	AATAAA	-21
PB.11117.9	chr8	+	3027	22	novel_not_in_catalog	HOOK3	novel	14398	22	NA	NA	5	791	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	56438.51084269135	NA	2	1	TRUE	NA	NA	NA	C	coding	549	1650	182	1831	20.0	-27	True	CATAAA	-27
PB.11117.8	chr8	+	4943	22	full-splice_match	HOOK3	ENST00000307602.8	14398	22	17	9438	3	2709	multi-exon	FALSE	canonical	1	131797	junction_16	39955.195624956854	NA	3	NA	TRUE	NA	NA	NA	C	coding	718	2157	184	2340	95.0	-29	True	NA	NA
PB.11117.6	chr8	+	2737	23	novel_not_in_catalog	HOOK3	novel	14398	22	NA	NA	-2	3693	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	56428.77156737781	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	203	2359	100.0	-48	True	TTTAAA	-19
PB.11117.4	chr8	+	4191	23	novel_not_in_catalog	HOOK3	novel	14398	22	NA	NA	-5	3693	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	56428.77156737781	NA	13	NA	TRUE	NA	NA	NA	C	coding	718	2157	206	2362	100.0	-51	True	TTTAAA	-19
PB.11117.3	chr8	+	2024	19	incomplete-splice_match	HOOK3	ENST00000307602.8	14398	22	-12	20161	-12	30	3prime_fragment	FALSE	canonical	1	131797	junction_16	41161.92376591637	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1812	213	2024	60.0	-58	True	AAGAAA	-34
PB.11117.2	chr8	+	4612	23	novel_not_in_catalog	HOOK3	novel	14398	22	NA	NA	-40	3693	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	56428.77156737781	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	241	2397	100.0	-184	False	TTTAAA	-19
PB.11117.1	chr8	+	3703	22	full-splice_match	HOOK3	ENST00000307602.8	14398	22	-15	10710	-15	1437	multi-exon	FALSE	canonical	1	131797	junction_16	39955.195624956854	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	216	2372	30.0	-61	True	NA	NA
PB.9798.8	chr6	+	2907	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	44362.48754829042	NA	3	1	TRUE	NA	NA	NA	B	coding	326	981	104	1084	75.0	-17	True	NA	NA
PB.9798.9	chr6	+	2817	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	0	15	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	38995.115352224995	NA	5	1	TRUE	NA	NA	NA	B	coding	327	984	205	1188	15.0	0	True	NA	NA
PB.9685.1	chr5	-	3353	4	novel_in_catalog	RACK1	novel	1150	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	26456025	junction_3	2117019.1530245226	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	885	1277	10.0	-11	True	AATAAA	-20
PB.6511.1	chr2	-	2819	6	full-splice_match	RAB1A	ENST00000409784.7	2447	6	0	-372	0	372	multi-exon	FALSE	canonical	1	674809	junction_4	307029.88118318387	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	192	809	35.0	-7	True	AGTAAA	-14
PB.9685.7	chr5	-	1930	7	novel_in_catalog	RACK1	novel	1150	8	NA	NA	0	5	intron_retention	FALSE	canonical	1	318285	junction_6	10722032.414167013	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	252	881	65.0	-11	True	NA	NA
PB.9685.6	chr5	-	2219	6	novel_in_catalog	RACK1	novel	1150	8	NA	NA	0	5	intron_retention	FALSE	canonical	1	15949435	junction_1	5441487.702370681	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	109	735	65.0	-3	True	NA	NA
PB.9685.5	chr5	-	1079	8	full-splice_match	RACK1	ENST00000512805.5	1403	8	305	19	0	5	multi-exon	FALSE	canonical	1	15949435	junction_1	5266481.510082307	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	105	1058	65.0	1	True	NA	NA
PB.9685.4	chr5	-	1946	7	novel_in_catalog	RACK1	novel	1150	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	15949435	junction_1	5637067.417474397	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	119	871	10.0	-13	True	AATAAA	-20
PB.9798.1	chr6	+	3599	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	-7	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	37657.0896187631	NA	3	1	TRUE	NA	NA	NA	B	coding	327	984	124	1107	35.0	-113	False	NA	NA
PB.9798.2	chr6	+	2785	7	novel_in_catalog	BTN2A2	novel	1790	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	44727	junction_1	23911.254453824786	NA	1	NA	TRUE	NA	NA	NA	B	coding	323	972	117	1088	75.0	-30	True	NA	NA
PB.9798.3	chr6	+	4294	6	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	43760.988820637955	NA	4	1	TRUE	NA	NA	NA	B	coding	327	984	175	1158	75.0	-25	True	NA	NA
PB.9798.4	chr6	+	2779	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	0	8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	40198.227278492435	NA	3	1	TRUE	NA	NA	NA	B	coding	327	984	174	1157	25.0	-24	True	NA	NA
PB.9798.5	chr6	+	2685	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	37657.0896187631	NA	3	1	TRUE	NA	NA	NA	B	coding	327	984	111	1094	75.0	-24	True	NA	NA
PB.9798.6	chr6	+	4376	6	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	1	6	intron_retention	FALSE	canonical	0	0	junction_5	42350.35331139517	NA	4	1	TRUE	NA	NA	NA	B	coding	327	984	228	1211	25.0	-23	True	NA	NA
PB.9798.7	chr6	+	3879	5	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	42648.333607539695	NA	5	1	TRUE	NA	NA	NA	B	coding	211	636	108	743	75.0	-21	True	NA	NA
PB.9238.8	chr5	-	1743	11	incomplete-splice_match	PLK2	ENST00000617412.1	2792	15	54	1560	1	64	intron_retention	FALSE	canonical	1	526945	junction_10	80923.43921763335	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1617	127	1743	50.0	0	True	NA	NA
PB.11430.2	chr9	+	1926	7	novel_not_in_catalog	RFX3-AS1	novel	552	6	NA	NA	1950	-6552	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	2250.4340630692163	NA	6	2	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.1464.32	chr10	-	1937	15	full-splice_match	P4HA1	ENST00000307116.6	2727	15	-70	860	54	-853	multi-exon	FALSE	canonical	1	275909	junction_6	244966.20321699692	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	188	1792	20.0	418	False	NA	NA
PB.1464.33	chr10	-	2849	14	incomplete-splice_match	P4HA1	ENST00000373008.6	2727	15	-15	1407	-15	1016	3prime_fragment	FALSE	canonical	1	448881	junction_13	202562.96377853866	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	133	1701	20.0	0	True	CATAAA	-22
PB.1464.30	chr10	-	2047	15	full-splice_match	P4HA1	ENST00000373008.6	2727	15	-16	696	-16	-689	multi-exon	FALSE	canonical	1	448881	junction_14	195656.72187210896	NA	6	1	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	30.0	-1	True	GATAAA	-19
PB.1464.31	chr10	-	1937	15	full-splice_match	P4HA1	ENST00000373008.6	2727	15	-16	806	-16	-799	multi-exon	FALSE	canonical	1	448881	junction_14	195656.72187210896	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	40.0	-1	True	TTTAAA	-25
PB.9238.7	chr5	-	2128	14	full-splice_match	PLK2	ENST00000274289.7	2960	14	175	657	1	67	multi-exon	FALSE	canonical	1	526945	junction_13	77251.44539349807	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2001	127	2127	60.0	0	True	NA	NA
PB.9238.6	chr5	-	2642	14	full-splice_match	PLK2	ENST00000274289.7	2960	14	174	144	0	-139	multi-exon	FALSE	canonical	1	526945	junction_13	77251.44539349807	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	128	2185	25.0	-1	True	NA	NA
PB.1464.34	chr10	-	1833	14	incomplete-splice_match	P4HA1	ENST00000373008.6	2727	15	-15	2423	-15	0	3prime_fragment	FALSE	canonical	1	448881	junction_13	202562.96377853866	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	133	1701	35.0	0	True	AATACA	-14
PB.1464.35	chr10	-	2120	12	incomplete-splice_match	P4HA1	ENST00000373008.6	2727	15	-14	6386	-14	-3963	3prime_fragment	FALSE	canonical	1	448881	junction_11	210528.07882744964	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	132	1514	25.0	1	True	NA	NA
PB.77.13	chr1	+	5359	24	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	TRUE	canonical	1	2406	junction_5	68606.29702416988	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	1212	3494	60.0	13	True	AGTAAA	-9
PB.8222.5	chr3	+	4615	1	novel_in_catalog	ARL6IP5	novel	2101	3	NA	NA	2	-12257	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.8222.4	chr3	+	1887	3	full-splice_match	ARL6IP5	ENST00000273258.3	2101	3	213	1	115	1	multi-exon	FALSE	canonical	1	1723351	junction_1	122625.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	48	458	15.0	-7680	False	AATAAA	-14
PB.8222.6	chr3	+	2189	3	full-splice_match	ARL6IP5	ENST00000273258.3	2101	3	79	-167	2	167	multi-exon	FALSE	canonical	1	1723351	junction_1	122625.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	188	567	26	592	30.0	0	True	AATAAA	-19
PB.8222.1	chr3	+	1397	3	full-splice_match	ARL6IP5	ENST00000273258.3	2101	3	-5	709	-5	-707	multi-exon	FALSE	canonical	1	1723351	junction_1	122625.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	110	676	75.0	2	True	NA	NA
PB.8222.3	chr3	+	2349	3	full-splice_match	ARL6IP5	ENST00000273258.3	2101	3	59	-307	-12	307	multi-exon	FALSE	canonical	1	1723351	junction_1	122625.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	46	612	35.0	-20	True	AATAAA	-33
PB.8222.2	chr3	+	1796	3	full-splice_match	ARL6IP5	ENST00000273258.3	2101	3	40	265	-31	-263	multi-exon	FALSE	canonical	1	1723351	junction_1	122625.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	65	631	30.0	-39	True	AATAAA	-22
PB.4628.7	chr16	+	2233	18	full-splice_match	TCF25	ENST00000263346.12	2233	18	3	-3	3	3	multi-exon	FALSE	canonical	1	818834	junction_12	182489.98162172514	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	54	2084	5.0	-1	True	TATAAA	-22
PB.4628.6	chr16	+	2963	17	novel_in_catalog	TCF25	novel	2688	20	NA	NA	2	0	intron_retention	FALSE	canonical	1	818834	junction_12	187754.48945198354	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	55	1527	5.0	-2	True	TATAAA	-19
PB.4628.5	chr16	+	2116	17	novel_in_catalog	TCF25	novel	2688	20	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	24385	junction_6	313769.18192647374	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	851	1972	5.0	4	True	TATAAA	-17
PB.4628.4	chr16	+	2211	18	novel_in_catalog	TCF25	novel	2688	20	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	52595	junction_7	299080.21307487646	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	77	2062	5.0	0	True	TATAAA	-22
PB.4628.3	chr16	+	3579	18	novel_in_catalog	TCF25	novel	2688	20	NA	NA	1	0	intron_retention	FALSE	canonical	1	76394	junction_16	360416.8064186673	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	2170	3411	5.0	-5	True	TATAAA	-19
PB.4628.2	chr16	+	2410	19	novel_in_catalog	TCF25	novel	2688	20	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	76394	junction_17	350880.35466071655	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	92	2242	5.0	-15	True	TATAAA	-19
PB.4628.1	chr16	+	3458	17	novel_in_catalog	TCF25	novel	2688	20	NA	NA	3	7	intron_retention	TRUE	canonical	1	818834	junction_11	182032.2094897352	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	2184	3305	10.0	-19	True	TATAAA	-26
PB.2515.13	chr12	-	1927	14	novel_not_in_catalog	INTS13	novel	1378	8	NA	NA	-27	452	any annotated donor/acceptor	FALSE	canonical	1	16158	junction_5	119923.01681465903	NA	2	1	TRUE	NA	NA	NA	C	coding	570	1710	216	1925	60.0	-20	True	NA	NA
PB.11627.2	chr9	-	4387	27	novel_not_in_catalog	AGTPBP1	novel	4208	26	NA	NA	52	0	any annotated donor/acceptor	FALSE	canonical	1	9246	junction_13	74713.21562712098	NA	0	NA	TRUE	NA	NA	NA	C	coding	1193	3582	237	3818	15.0	-52	True	AATAAA	-19
PB.10923.10	chr7	+	1949	4	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	4703	junction_1	8193.832490897583	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	10	True	AATAAA	-15
PB.77.12	chr1	+	5372	25	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	15861	junction_2	76264.73960432126	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	373	3507	60.0	13	True	AGTAAA	-9
PB.687.1	chr1	-	3669	17	novel_in_catalog	NBPF10	novel	13042	90	NA	NA	56177	-99	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2068.216437990715	NA	2	NA	TRUE	NA	NA	NA	B	coding	663	1992	158	2149	15.0	NA	False	ATTAAA	-21
PB.11185.12	chr8	-	4298	12	full-splice_match	STAU2	ENST00000355780.9	4061	12	-39	-198	0	198	multi-exon	FALSE	canonical	1	57923	junction_1	80314.49220192389	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	259	1698	25.0	591	False	AATAAA	-36
PB.449.4	chr1	+	4090	15	novel_not_in_catalog	ALG6	novel	1841	15	NA	NA	-7	4	intron_retention	FALSE	non_canonical	0	0	junction_7	71471.11667577786	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	260	757	30.0	9	True	AATAAA	-22
PB.9691.8	chr6	-	3420	28	full-splice_match	EXOC2	ENST00000230449.8	4449	28	2	1027	-1	-1027	multi-exon	FALSE	canonical	1	123727	junction_27	40263.91137232731	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	135	2909	35.0	-1	True	TATAAA	-22
PB.9691.9	chr6	-	3260	29	novel_not_in_catalog	EXOC2	novel	4449	28	NA	NA	-4	-966	any annotated donor/acceptor	FALSE	canonical	1	5872	junction_1	57861.43741160199	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	141	2915	10.0	-7	True	ATTAAA	-25
PB.4382.3	chr16	+	4752	19	incomplete-splice_match	RNF40	ENST00000324685.10	5634	20	318	2311	-7	14	intron_retention	FALSE	canonical	1	266913	junction_1	126996.92180440125	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	118	3045	5.0	-3185	False	NA	NA
PB.9691.5	chr6	-	4537	29	novel_in_catalog	EXOC2	novel	4449	28	NA	NA	-20	-6	no_combination_of_known_junctions	FALSE	canonical	1	19890	junction_27	64791.82427609393	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	231	3005	25.0	-23	True	AATAAA	-30
PB.9691.7	chr6	-	3576	29	novel_in_catalog	EXOC2	novel	4449	28	NA	NA	-17	-964	no_combination_of_known_junctions	FALSE	canonical	1	19890	junction_27	64791.82427609393	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	228	3002	5.0	-20	True	ATTAAA	-27
PB.6443.32	chr2	-	3169	23	incomplete-splice_match	LRPPRC	ENST00000260665.11	6335	38	0	56572	0	5346	3prime_fragment	FALSE	canonical	1	374963	junction_22	211394.5421359496	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	59	2566	20.0	-1	True	AATAAA	-25
PB.9691.1	chr6	-	4642	29	novel_not_in_catalog	EXOC2	novel	4449	28	NA	NA	-28	-1	any annotated donor/acceptor	FALSE	canonical	1	1595	junction_28	69179.74836674918	NA	1	NA	TRUE	NA	NA	NA	C	coding	924	2775	331	3105	20.0	28	False	AATAAA	-35
PB.9691.2	chr6	-	4531	29	novel_not_in_catalog	EXOC2	novel	4449	28	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	1298	junction_6	71725.31253191596	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	147	2399	20.0	-13	True	AATAAA	-35
PB.9691.3	chr6	-	4455	28	full-splice_match	EXOC2	ENST00000230449.8	4449	28	-7	1	-7	-1	multi-exon	TRUE	canonical	1	123727	junction_27	40263.91137232731	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	144	2918	20.0	-10	True	AATAAA	-35
PB.11336.10	chr8	-	6359	28	novel_in_catalog	WASHC5	novel	976	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	139493	junction_27	69656.78062728728	NA	1	NA	TRUE	NA	NA	NA	C	coding	941	2826	3185	6010	20.0	-28	True	AGTAAA	-14
PB.11336.11	chr8	-	4056	29	novel_not_in_catalog	WASHC5	novel	976	3	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	92827.29157212372	NA	29	3	TRUE	NA	NA	NA	C	coding	806	2421	1288	3708	20.0	17	True	AGTAAA	-13
PB.11336.12	chr8	-	4187	27	incomplete-splice_match	WASHC5	ENST00000318410.11	4187	29	53	7426	3	-7419	3prime_fragment	FALSE	canonical	1	139493	junction_26	69975.30294871751	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	298	3687	10.0	31	False	GATAAA	-22
PB.11336.13	chr8	-	4339	27	novel_not_in_catalog	WASHC5	novel	4187	29	NA	NA	-1	9122	any annotated donor/acceptor	FALSE	canonical	1	7699	junction_1	94472.51497141985	NA	0	NA	TRUE	NA	NA	NA	C	coding	1095	3288	302	3589	20.0	27	False	ATTAAA	-16
PB.5703.1	chr19	+	3204	15	full-splice_match	PDE4A	ENST00000380702.6	4781	15	-162	1739	-162	-39	multi-exon	TRUE	canonical	1	7696	junction_1	31057.79579711848	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	273	2933	85.0	-59	True	NA	NA
PB.5703.2	chr19	+	2903	15	full-splice_match	PDE4A	ENST00000293683.9	2583	15	-49	-271	-49	-39	multi-exon	FALSE	canonical	1	24308	junction_1	27670.84402104017	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	50	2632	85.0	-7	True	NA	NA
PB.5703.3	chr19	+	3046	15	full-splice_match	PDE4A	ENST00000440014.6	2478	15	-297	-271	-297	-39	multi-exon	FALSE	canonical	1	3573	junction_1	31931.575459272666	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	298	2775	85.0	-2776	False	NA	NA
PB.990.5	chr1	-	5953	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	30	945	30	-945	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	2	NA	TRUE	NA	NA	NA	C	coding	928	2787	165	2951	75.0	19	False	NA	NA
PB.7943.1	chr3	-	3021	15	novel_in_catalog	RAF1	novel	3300	17	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	1	26896	junction_13	323613.6371464325	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	503	2104	15.0	-39	False	AATAAA	-26
PB.990.7	chr1	-	3759	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	50	3119	50	-31	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	145	2931	20.0	7	True	NA	NA
PB.990.1	chr1	-	6894	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	30	4	30	-4	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	1	NA	TRUE	NA	NA	NA	C	coding	928	2787	165	2951	35.0	19	False	AATAAA	-14
PB.990.3	chr1	-	6430	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	21	477	21	-477	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	2	NA	TRUE	NA	NA	NA	C	coding	928	2787	174	2960	85.0	10	False	AGTAAA	-9
PB.105.2	chr1	+	1977	4	full-splice_match	TMEM51	ENST00000376008.2	1931	4	-47	1	9	-1	multi-exon	FALSE	canonical	1	22768	junction_1	53565.856851377095	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	483	1241	15.0	-21	True	AATAAA	-19
PB.105.3	chr1	+	1796	3	full-splice_match	TMEM51	ENST00000400796.7	1842	3	14	32	14	-17	multi-exon	FALSE	canonical	1	14699	junction_1	63242.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	405	1163	95.0	-16	True	NA	NA
PB.105.1	chr1	+	1898	4	full-splice_match	TMEM51	ENST00000376008.2	1931	4	-71	104	-15	-17	multi-exon	FALSE	canonical	1	22768	junction_1	53565.856851377095	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	507	1265	95.0	-45	True	NA	NA
PB.8504.6	chr3	-	2262	6	full-splice_match	B3GALNT1	ENST00000484127.5	552	6	-64	-1646	-20	-2	multi-exon	FALSE	canonical	1	14671	junction_2	32146.583573375257	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	529	1488	25.0	-37	True	ATTAAA	-14
PB.8504.4	chr3	-	3196	4	full-splice_match	B3GALNT1	ENST00000392779.6	3221	4	13	12	-6	-12	multi-exon	FALSE	canonical	1	13766	junction_1	34623.39282431268	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	373	1332	30.0	55	False	NA	NA
PB.8504.5	chr3	-	2909	5	full-splice_match	B3GALNT1	ENST00000320474.9	3313	5	19	385	3	-385	multi-exon	FALSE	canonical	1	47994	junction_4	18684.80447281962	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	459	1418	45.0	64	False	AATAAA	-13
PB.8504.2	chr3	-	3294	5	full-splice_match	B3GALNT1	ENST00000473142.5	572	5	-28	-2694	-21	-2	multi-exon	FALSE	canonical	1	3930	junction_2	37661.02275230985	NA	1	1	TRUE	NA	NA	NA	C	coding	319	960	461	1420	25.0	-38	True	NA	NA
PB.8504.3	chr3	-	3543	7	full-splice_match	B3GALNT1	ENST00000468268.5	914	7	-101	-2528	-20	-11	multi-exon	FALSE	canonical	1	7386	junction_6	34322.51207136344	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	719	1678	30.0	8	True	NA	NA
PB.8504.1	chr3	-	3253	5	full-splice_match	B3GALNT1	ENST00000320474.9	3313	5	57	3	-5	-3	multi-exon	FALSE	canonical	1	47994	junction_4	18684.80447281962	NA	2	NA	TRUE	NA	NA	NA	C	coding	319	960	421	1380	25.0	-22	True	NA	NA
PB.77.10	chr1	+	5065	23	novel_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	6474	junction_14	71018.17478878613	NA	1	NA	TRUE	NA	NA	NA	C	coding	996	2991	210	3200	60.0	0	True	AGTAAA	-9
PB.1921.21	chr11	-	6562	44	full-splice_match	CKAP5	ENST00000529230.5	7121	44	-50	609	17	-117	multi-exon	FALSE	canonical	1	318378	junction_43	207752.63031111704	NA	2	NA	TRUE	NA	NA	NA	C	coding	2032	6099	98	6196	10.0	-2	True	NA	NA
PB.10306.4	chr6	+	5109	17	novel_not_in_catalog	TMEM181	novel	5390	17	NA	NA	23653	5	any annotated donor/acceptor	FALSE	canonical	1	65821	junction_1	54956.08904669795	NA	2	NA	TRUE	NA	NA	NA	B	coding	475	1428	137	1564	10.0	-28	True	AATAAA	-18
PB.1921.23	chr11	-	3955	29	incomplete-splice_match	CKAP5	ENST00000312055.9	6532	43	16	19787	4	-177	3prime_fragment	FALSE	canonical	1	318378	junction_28	103832.22358397022	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	111	3812	25.0	-15	True	AATAAA	-13
PB.1921.22	chr11	-	5455	36	incomplete-splice_match	CKAP5	ENST00000529230.5	7121	44	-65	11366	2	-925	3prime_fragment	FALSE	canonical	1	318378	junction_35	148816.08230475464	NA	0	NA	TRUE	NA	NA	NA	C	coding	1652	4959	113	5071	30.0	-17	True	NA	NA
PB.1921.25	chr11	-	1815	14	incomplete-splice_match	CKAP5	ENST00000312055.9	6532	43	28	46981	16	7327	3prime_fragment	FALSE	canonical	1	318378	junction_13	88490.70578214688	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1716	99	1814	45.0	-3	True	NA	NA
PB.1921.24	chr11	-	3618	28	incomplete-splice_match	CKAP5	ENST00000312055.9	6532	43	16	21624	4	-2014	3prime_fragment	FALSE	canonical	1	318378	junction_27	103603.35111337103	NA	0	NA	TRUE	NA	NA	NA	C	coding	1169	3507	111	3617	65.0	-15	True	NA	NA
PB.1921.26	chr11	-	991	7	incomplete-splice_match	CKAP5	ENST00000312055.9	6532	43	-4	65867	-4	6800	3prime_fragment	FALSE	canonical	1	318378	junction_6	120202.37533761784	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	861	131	991	45.0	-35	False	NA	NA
PB.10306.6	chr6	+	3934	1	novel_in_catalog	TMEM181	novel	5390	17	NA	NA	79498	-15561	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9479.12	chr5	-	1953	11	full-splice_match	ETF1	ENST00000360541.9	3742	11	43	1746	-28	145	multi-exon	FALSE	canonical	1	333933	junction_2	290410.7289277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	180	1493	25.0	458	False	ATTAAA	-27
PB.9479.13	chr5	-	1798	11	full-splice_match	ETF1	ENST00000360541.9	3742	11	45	1899	-26	-8	multi-exon	FALSE	canonical	1	333933	junction_2	290410.7289277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	178	1491	55.0	460	False	NA	NA
PB.9479.10	chr5	-	2463	11	novel_in_catalog	ETF1	novel	3874	11	NA	NA	-6	549	combination_of_known_junctions	FALSE	canonical	1	15894	junction_9	361902.6492433566	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	385	1599	50.0	-27	True	AATAAA	-20
PB.11121.8	chr8	+	5186	18	full-splice_match	HGSNAT	ENST00000379644.8	5236	18	21	29	21	-29	multi-exon	FALSE	canonical	1	77951	junction_1	56541.78816099564	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	22	1929	30.0	-21	True	AATAAA	-17
PB.9479.15	chr5	-	1611	11	full-splice_match	ETF1	ENST00000360541.9	3742	11	64	2067	-7	-176	multi-exon	FALSE	canonical	1	333933	junction_2	290410.7289277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	159	1472	75.0	-28	True	NA	NA
PB.11904.3	chr9	-	8154	31	novel_not_in_catalog	SEC16A	novel	1988	2	NA	NA	698	0	any annotated donor/acceptor	FALSE	canonical	1	81032	junction_29	124409.2921777371	NA	3	NA	TRUE	NA	NA	NA	B	coding	2100	6303	194	6496	5.0	-22	True	AATAAA	-28
PB.7985.1	chr3	-	3262	6	full-splice_match	EOMES	ENST00000449599.3	2829	6	-11	-422	-11	-6	multi-exon	FALSE	canonical	1	36384	junction_5	9689.430501324627	NA	2	NA	TRUE	NA	NA	NA	A	coding	705	2118	30	2147	25.0	-1	True	AATAAA	-17
PB.10306.2	chr6	+	3702	17	novel_not_in_catalog	TMEM181	novel	5390	17	NA	NA	23642	-1413	any annotated donor/acceptor	TRUE	canonical	1	65821	junction_1	54956.08904669795	NA	0	NA	TRUE	NA	NA	NA	B	coding	475	1428	148	1575	40.0	-39	True	AGTAAA	-34
PB.11319.1	chr8	-	4757	7	full-splice_match	SNTB1	ENST00000517992.1	2273	7	280	-2764	206	-12	multi-exon	FALSE	canonical	1	160977	junction_1	21324.938215359238	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	21	1637	30.0	-7	True	AATAAA	-13
PB.10306.3	chr6	+	5057	16	novel_not_in_catalog	TMEM181	novel	5390	17	NA	NA	23645	3	any annotated donor/acceptor	FALSE	canonical	1	2955	junction_10	77331.80546421735	NA	3	NA	TRUE	NA	NA	NA	B	coding	300	903	145	1047	10.0	-36	True	AATAAA	-16
PB.9880.4	chr6	+	3884	28	novel_in_catalog	MSH5	novel	3094	25	NA	NA	0	2011	intron_retention	FALSE	canonical	1	32561	junction_19	57173.12790433005	NA	2	1	TRUE	NA	NA	NA	C	coding	534	1605	906	2510	25.0	-19	True	AATAAA	-32
PB.9880.5	chr6	+	2643	24	novel_in_catalog	MSH5	novel	3094	25	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	1	67564	junction_1	50126.030889936104	NA	2	2	TRUE	NA	NA	NA	C	coding	533	1602	904	2505	35.0	-17	True	AATAAA	-10
PB.9880.6	chr6	+	2726	25	full-splice_match	MSH5	ENST00000375750.7	2775	25	43	6	3	-6	multi-exon	FALSE	canonical	1	19468	junction_9	60569.77756130849	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	83	2587	35.0	-16	True	AATAAA	-11
PB.9880.7	chr6	+	2665	24	novel_not_in_catalog	MSH5	novel	3094	25	NA	NA	6	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	69258.67659313808	NA	2	2	TRUE	NA	NA	NA	C	coding	330	993	1534	2526	35.0	1	True	AATAAA	-11
PB.9880.1	chr6	+	2787	25	novel_not_in_catalog	MSH5	novel	3094	25	NA	NA	-3	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	66942.44626911281	NA	1	1	TRUE	NA	NA	NA	C	coding	838	2517	132	2648	35.0	-65	False	AATAAA	-11
PB.9880.2	chr6	+	2903	25	full-splice_match	MSH5	ENST00000375755.7	3094	25	26	165	-17	-7	multi-exon	TRUE	canonical	1	19468	junction_9	63794.450446975374	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	261	2765	35.0	-36	True	AATAAA	-10
PB.9880.3	chr6	+	2898	23	novel_in_catalog	MSH5	novel	3094	25	NA	NA	-5	-6	intron_retention	TRUE	canonical	1	67564	junction_1	51248.42453155943	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	1767	2759	35.0	-24	True	AATAAA	-11
PB.10727.12	chr7	-	2083	3	full-splice_match	TSC22D4	ENST00000493217.1	2060	3	-34	11	29	-11	multi-exon	FALSE	canonical	1	441335	junction_2	112523.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	680	1612	80.0	-4	True	NA	NA
PB.10727.11	chr7	-	2594	2	incomplete-splice_match	TSC22D4	ENST00000493217.1	2060	3	-59	11	4	-11	intron_retention	FALSE	canonical	1	666381	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	1191	2123	80.0	25	False	NA	NA
PB.10727.10	chr7	-	2342	5	novel_not_in_catalog	TSC22D4	novel	837	5	NA	NA	-31	-2	any annotated donor/acceptor	FALSE	canonical	1	330	junction_2	491428.1576845058	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	677	1672	25.0	-1	True	ATTAAA	-36
PB.480.2	chr1	+	1469	10	novel_in_catalog	ACADM	novel	546	5	NA	NA	35805	7243	intron_retention	FALSE	canonical	1	70685	junction_1	404256.95219641656	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	828	1301	10.0	0	True	AATAAA	-41
PB.480.3	chr1	+	1441	9	full-splice_match	RABGGTB	ENST00000319942.7	1496	9	55	0	13	0	multi-exon	FALSE	canonical	1	70685	junction_1	356828.24557166157	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	17	1012	35.0	0	True	AATAAA	-17
PB.480.1	chr1	+	1240	9	full-splice_match	RABGGTB	ENST00000319942.7	1496	9	10	246	10	0	multi-exon	TRUE	canonical	1	70685	junction_1	356828.24557166157	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	62	1057	20.0	-8	True	AATAAA	-27
PB.9381.5	chr5	-	4758	9	novel_in_catalog	PJA2	novel	4889	10	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	659	junction_1	333571.29452815256	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	236	2164	35.0	14	True	AATAAA	-26
PB.5347.1	chr17	-	2064	8	full-splice_match	CYBC1	ENST00000578919.5	841	8	25	-1248	-1	0	multi-exon	FALSE	canonical	1	19967	junction_7	270472.90330720483	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	141	704	15.0	0	True	CATAAA	-17
PB.5347.3	chr17	-	3299	7	full-splice_match	CYBC1	ENST00000577732.5	1053	7	-1042	-1204	0	-1	multi-exon	FALSE	canonical	1	92000	junction_6	229445.7126914169	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	1377	1940	15.0	-17	True	CATAAA	-16
PB.5347.4	chr17	-	3281	6	novel_in_catalog	CYBC1	novel	1849	4	NA	NA	-3	0	intron_retention	FALSE	canonical	1	212703	junction_5	210169.0106836876	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	1803	2474	15.0	5	True	CATAAA	-17
PB.5347.5	chr17	-	2862	2	novel_not_in_catalog	CYBC1	novel	1849	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	26	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	2	True	CATAAA	-17
PB.5347.6	chr17	-	2813	2	novel_not_in_catalog	CYBC1	novel	1849	4	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	7737	False	CATAAA	-17
PB.5347.7	chr17	-	2509	8	novel_in_catalog	CYBC1	novel	1849	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	4064	junction_7	273952.4764988204	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	586	1149	15.0	31	True	CATAAA	-17
PB.5347.8	chr17	-	2092	7	full-splice_match	CYBC1	ENST00000306645.9	2093	7	0	1	0	0	multi-exon	FALSE	canonical	1	212703	junction_6	195746.48220423615	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	169	732	15.0	7689	False	CATAAA	-17
PB.5347.9	chr17	-	4983	5	full-splice_match	CYBC1	ENST00000585044.5	4327	5	-656	0	3	0	multi-exon	FALSE	canonical	1	482489	junction_4	105578.65200023867	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	3505	4176	15.0	-14	True	CATAAA	-17
PB.11904.1	chr9	-	4756	25	incomplete-splice_match	SEC16A	ENST00000371706.7	8093	28	10071	-4	7	0	5prime_fragment	TRUE	canonical	1	55078	junction_2	124993.67782939147	NA	0	NA	TRUE	NA	NA	NA	B	coding	881	2646	453	3098	5.0	NA	False	AATAAA	-28
PB.8270.1	chr3	+	1823	2	full-splice_match	TRMT10C	ENST00000309922.6	1819	2	-6	2	-6	-2	multi-exon	FALSE	canonical	1	321065	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	161	1372	35.0	-12	True	NA	NA
PB.695.6	chr1	-	3988	9	novel_in_catalog	ACP6	novel	1874	6	NA	NA	12	0	intron_retention	FALSE	canonical	1	140350	junction_8	23045.364148782723	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	437	1321	0.0	-11	True	AATAAA	-17
PB.695.7	chr1	-	1743	10	novel_in_catalog	ACP6	novel	1874	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	17879	junction_3	66101.38970373794	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	447	1262	0.0	-21	True	AATAAA	-17
PB.695.4	chr1	-	4406	9	novel_not_in_catalog	ACP6	novel	1874	6	NA	NA	12	0	intron_retention	FALSE	canonical	1	4955	junction_8	73010.93563370747	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	1111	1572	0.0	-11	True	AATAAA	-17
PB.695.5	chr1	-	3854	9	novel_in_catalog	ACP6	novel	1874	6	NA	NA	26	0	intron_retention	FALSE	canonical	1	30064	junction_3	52878.898556040294	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	205	1020	0.0	-1	True	AATAAA	-17
PB.695.2	chr1	-	2420	9	novel_in_catalog	ACP6	novel	1874	6	NA	NA	6	2	intron_retention	FALSE	canonical	1	17879	junction_2	70107.3364134195	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	443	1258	0.0	-17	True	AATAAA	-19
PB.695.3	chr1	-	1555	10	full-splice_match	ACP6	ENST00000583509.6	6923	10	231	5137	13	-4	multi-exon	FALSE	canonical	1	140350	junction_9	21989.47833638108	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	218	1504	10.0	-14	True	AATAAA	-13
PB.695.1	chr1	-	4758	8	full-splice_match	ACP6	ENST00000613673.4	4564	8	-191	-3	22	3	multi-exon	FALSE	canonical	1	30064	junction_2	56269.81350055956	NA	4	1	TRUE	NA	NA	NA	C	coding	271	816	427	1242	5.0	-1	True	AATAAA	-20
PB.8270.3	chr3	+	1446	2	full-splice_match	TRMT10C	ENST00000309922.6	1819	2	7	366	7	363	multi-exon	FALSE	canonical	1	321065	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	148	1359	30.0	1	True	AGTAAA	-11
PB.254.1	chr1	-	2397	9	novel_in_catalog	TMEM234	novel	2736	4	NA	NA	-1	0	intron_retention	FALSE	canonical	1	27396	junction_6	44175.198917032336	NA	0	NA	TRUE	NA	NA	NA	B	coding	96	291	18	308	30.0	6	True	AATATA	-12
PB.1195.10	chr1	+	2213	15	incomplete-splice_match	GNPAT	ENST00000366647.8	2643	16	4	1728	-2	977	3prime_fragment	FALSE	canonical	1	306069	junction_2	106622.96350302952	NA	1	1	TRUE	NA	NA	NA	C	coding	682	2046	166	2211	55.0	2	True	AATAAA	-31
PB.9571.21	chr5	-	2314	25	incomplete-splice_match	ANXA6	ENST00000354546.9	2593	26	81	2260	-16	-1885	3prime_fragment	FALSE	canonical	1	1653387	junction_5	645826.1948044072	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	148	2133	55.0	-23	True	ATTAAA	-8
PB.9571.22	chr5	-	2296	24	novel_in_catalog	ANXA6	novel	451	4	NA	NA	-16	-1885	combination_of_known_junctions	FALSE	canonical	1	481592	junction_4	758892.7269206166	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	148	2115	55.0	-23	True	ATTAAA	-8
PB.5357.1	chr18	+	3071	1	full-splice_match	AP000845.1	ENST00000581677.1	2131	1	24	-964	24	964	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	A	coding	105	318	140	457	100.0	0	True	NA	NA
PB.9571.17	chr5	-	2615	27	novel_not_in_catalog	ANXA6	novel	451	4	NA	NA	-643	-1	any annotated donor/acceptor	FALSE	canonical	1	2742	junction_25	933953.4290907258	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	256	2277	35.0	-747	False	AAAACA	-18
PB.11413.1	chr8	+	2579	5	full-splice_match	ZNF7	ENST00000532777.5	915	5	92	-1756	1	-185	multi-exon	FALSE	canonical	1	72335	junction_2	40082.9762898166	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	100	2160	100.0	-4	True	NA	NA
PB.7338.1	chr20	+	3259	4	novel_in_catalog	LINC00494	novel	3544	5	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	317	junction_1	1988.694099710215	NA	2	NA	TRUE	NA	NA	NA	A	coding	131	396	1320	1715	15.0	0	True	NA	NA
PB.11243.10	chr8	+	3970	17	novel_in_catalog	DPY19L4	novel	680	4	NA	NA	11	-1992	no_combination_of_known_junctions	FALSE	canonical	1	9255	junction_5	51477.54473095375	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	648	2036	40.0	-14	True	AATAAA	-21
PB.3195.5	chr13	-	4070	11	novel_not_in_catalog	TBC1D4	novel	6656	20	NA	NA	-449	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	87054.39623614651	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	405	1952	20.0	-1	True	AATAAA	-17
PB.3195.7	chr13	-	5533	19	novel_in_catalog	TBC1D4	novel	6656	20	NA	NA	-103	-2	no_combination_of_known_junctions	FALSE	canonical	1	13167	junction_18	73942.00541208705	NA	3	NA	TRUE	NA	NA	NA	C	coding	1054	3165	251	3415	20.0	-104	False	AATAAA	-17
PB.3195.6	chr13	-	3175	6	novel_not_in_catalog	TBC1D4	novel	6656	20	NA	NA	2490	-2	any annotated donor/acceptor	FALSE	canonical	1	652	junction_5	112909.90256483264	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	17	1057	20.0	9986	False	AATAAA	-17
PB.10969.13	chr8	+	2640	14	novel_not_in_catalog	MCPH1	novel	8039	14	NA	NA	5	4453	any annotated donor/acceptor	FALSE	canonical	1	2782	junction_13	46609.66199870082	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	21	2636	30.0	21	True	GATAAA	-14
PB.10969.12	chr8	+	2788	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	42	87	-5	-87	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	31	1863	65.0	11	True	NA	NA
PB.10969.11	chr8	+	3020	13	novel_in_catalog	MCPH1	novel	8039	14	NA	NA	-7	274	no_combination_of_known_junctions	FALSE	canonical	1	2690	junction_4	48781.87538818991	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	443	2425	45.0	9	True	AATAAA	-36
PB.3195.2	chr13	-	6087	19	full-splice_match	TBC1D4	ENST00000377625.6	6182	19	86	9	86	-2	multi-exon	FALSE	canonical	1	122828	junction_16	62144.3456355374	NA	1	NA	TRUE	NA	NA	NA	C	coding	1235	3708	262	3969	20.0	619	False	AATAAA	-17
PB.3195.8	chr13	-	6100	18	novel_in_catalog	TBC1D4	novel	6656	20	NA	NA	-43	-7	no_combination_of_known_junctions	FALSE	canonical	1	7577	junction_12	76797.37324178066	NA	2	NA	TRUE	NA	NA	NA	C	coding	1198	3597	391	3987	20.0	11	True	AATAAA	-12
PB.3426.10	chr14	-	3089	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	11	-1251	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	90373.33552279172	NA	2	1	TRUE	NA	NA	NA	B	coding	845	2538	309	2846	35.0	2	True	AATAAA	-23
PB.1650.8	chr10	+	3457	12	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	74591	junction_2	370427.07931655284	NA	2	NA	TRUE	NA	NA	NA	C	coding	455	1368	173	1540	45.0	-19	True	AATAAA	-19
PB.8151.5	chr3	+	2033	11	incomplete-splice_match	PARP3	ENST00000417220.6	2472	12	662	-2	70	2	5prime_fragment	FALSE	canonical	1	31711	junction_1	49500.861405030104	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	48	1649	25.0	-13	True	NA	NA
PB.1650.4	chr10	+	2181	12	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-1	20	combination_of_known_junctions	FALSE	canonical	1	74591	junction_2	370427.07931655284	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	164	1531	20.0	-10	True	AATAAA	-15
PB.1650.7	chr10	+	4387	11	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-10	20	intron_retention	FALSE	canonical	1	482239	junction_1	276496.9923816351	NA	2	NA	TRUE	NA	NA	NA	C	coding	283	852	2886	3737	20.0	-19	True	AATAAA	-15
PB.1650.6	chr10	+	1729	13	full-splice_match	PDCD4	ENST00000393104.6	3697	13	103	1865	5	18	multi-exon	FALSE	canonical	1	28695	junction_3	450406.8245803824	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	301	1677	35.0	5	True	TATAAA	-19
PB.1650.1	chr10	+	2766	13	novel_not_in_catalog	AL136368.1	novel	401	2	NA	NA	1430	27155	any annotated donor/acceptor	FALSE	canonical	1	2350	junction_1	385087.50694070244	NA	1	NA	TRUE	NA	NA	NA	A	coding	469	1410	696	2105	25.0	-4584	False	AATAAA	-26
PB.8151.6	chr3	+	1907	10	incomplete-splice_match	PARP3	ENST00000398755.7	2336	11	1076	-2	124	2	5prime_fragment	FALSE	canonical	1	151462	junction_7	19344.828812315136	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	522	1523	25.0	146	False	NA	NA
PB.1650.3	chr10	+	2677	12	full-splice_match	PDCD4	ENST00000280154.11	3602	12	91	834	5	454	multi-exon	FALSE	canonical	1	482239	junction_1	263645.22818686196	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	184	1593	25.0	5	True	AATAAA	-44
PB.1650.2	chr10	+	2214	12	full-splice_match	PDCD4	ENST00000280154.11	3602	12	121	1267	9	21	multi-exon	FALSE	canonical	1	482239	junction_1	263645.22818686196	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	154	1563	20.0	0	True	AATAAA	-16
PB.2426.1	chr12	+	2333	7	incomplete-splice_match	LAG3	ENST00000203629.2	1974	8	-37	0	-29	0	intron_retention	FALSE	canonical	1	19915	junction_1	19043.71858528569	NA	4	NA	TRUE	NA	NA	NA	C	coding	506	1521	371	1891	15.0	-8416	False	AATAAA	-16
PB.9889.1	chr6	-	1312	11	full-splice_match	NELFE	ENST00000375429.7	1584	11	140	132	-2	8	multi-exon	TRUE	canonical	1	593211	junction_10	277646.43889848475	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	88	1230	10.0	-9	True	AGTAAA	-29
PB.2426.3	chr12	+	1984	8	full-splice_match	LAG3	ENST00000203629.2	1974	8	-10	0	-2	0	multi-exon	FALSE	canonical	1	19915	junction_1	19368.93252460902	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	344	1921	15.0	-8389	False	AATAAA	-16
PB.2426.2	chr12	+	2076	8	novel_not_in_catalog	LAG3	novel	2587	6	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	2895	junction_7	22884.518913850196	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	350	1894	15.0	0	True	AATAAA	-16
PB.689.5	chr1	-	2215	5	full-splice_match	NOTCH2NLA	ENST00000362074.7	1874	5	5	-346	5	346	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	236	711	358	1068	50.0	-22	True	ATTAAA	-18
PB.2426.4	chr12	+	2500	5	novel_not_in_catalog	LAG3	novel	2587	6	NA	NA	0	-499	intron_retention	FALSE	canonical	1	1446	junction_4	12604.243303348281	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	334	1143	10.0	0	True	NA	NA
PB.689.7	chr1	-	1874	5	full-splice_match	NOTCH2NLA	ENST00000362074.7	1874	5	-4	4	-4	-4	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	236	711	367	1077	45.0	-31	True	ATTAAA	-24
PB.689.6	chr1	-	2074	5	full-splice_match	NOTCH2NLA	ENST00000362074.7	1874	5	9	-209	9	209	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	236	711	354	1064	45.0	-18	True	AATAAA	-19
PB.12290.6	chrX	-	1933	11	incomplete-splice_match	MAP7D3	ENST00000316077.13	4567	19	122	11864	-75	1710	3prime_fragment	FALSE	canonical	1	94488	junction_10	30538.368722805088	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1830	103	1932	70.0	4895	False	NA	NA
PB.1733.4	chr11	-	4081	4	full-splice_match	BET1L	ENST00000382762.7	2819	4	-1262	0	-1262	0	multi-exon	FALSE	canonical	1	277780	junction_3	108112.4149063783	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	1370	1705	20.0	-1	True	AATAAA	-33
PB.1733.7	chr11	-	2920	3	full-splice_match	BET1L	ENST00000325147.13	2916	3	-7	3	-6	-1	multi-exon	FALSE	canonical	1	277780	junction_2	130470.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	69	377	20.0	1	True	AATAAA	-32
PB.12290.5	chrX	-	2074	12	incomplete-splice_match	MAP7D3	ENST00000316077.13	4567	19	130	10524	-67	3050	3prime_fragment	FALSE	canonical	1	94488	junction_11	29120.186067598715	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1980	95	2074	55.0	4903	False	NA	NA
PB.1733.1	chr11	-	2781	4	full-splice_match	BET1L	ENST00000382762.7	2819	4	39	-1	-6	-1	multi-exon	FALSE	canonical	1	277780	junction_3	108112.4149063783	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	69	404	15.0	1	True	AATAAA	-34
PB.12290.3	chrX	-	2466	16	incomplete-splice_match	MAP7D3	ENST00000316077.13	4567	19	198	3997	1	971	3prime_fragment	FALSE	canonical	1	94488	junction_15	38481.63248696997	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2439	27	2465	60.0	-2	True	AAAACA	-32
PB.1733.3	chr11	-	4182	2	incomplete-splice_match	BET1L	ENST00000325147.13	2916	3	-9	2	-8	0	intron_retention	FALSE	canonical	1	538720	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	1213	1638	20.0	-1	True	AATAAA	-33
PB.1733.2	chr11	-	4464	1	novel_in_catalog	BET1L	novel	2819	4	NA	NA	-6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	120	363	1211	1573	20.0	1	True	AATAAA	-33
PB.2717.6	chr12	+	4562	22	full-splice_match	USP15	ENST00000280377.9	4748	22	21	165	14	-165	multi-exon	FALSE	canonical	1	199851	junction_6	122294.57169881964	NA	2	1	TRUE	NA	NA	NA	C	coding	981	2946	38	2983	20.0	-26	True	ATTAAA	-25
PB.2717.7	chr12	+	4634	21	full-splice_match	USP15	ENST00000353364.7	14950	21	45	10271	-14	-1	multi-exon	FALSE	canonical	1	134204	junction_6	122472.50667495745	NA	1	1	TRUE	NA	NA	NA	C	coding	952	2859	33	2891	20.0	-21	True	AATAAA	-16
PB.2717.4	chr12	+	4731	22	full-splice_match	USP15	ENST00000280377.9	4748	22	17	0	10	0	multi-exon	FALSE	canonical	1	199851	junction_6	122294.57169881964	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	42	2987	15.0	-4604	False	AATAAA	-17
PB.2717.5	chr12	+	2249	7	full-splice_match	USP15	ENST00000312635.10	2226	7	-22	-1	11	1	multi-exon	FALSE	canonical	1	62729	junction_6	188204.4400093951	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	41	748	20.0	-29	True	NA	NA
PB.2717.2	chr12	+	3299	22	novel_not_in_catalog	USP15	novel	14950	21	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	13068	junction_17	153820.0277262529	NA	3	1	TRUE	NA	NA	NA	C	coding	775	2328	57	2384	25.0	3	True	AATAAA	-29
PB.2717.3	chr12	+	2513	3	full-splice_match	USP15	ENST00000551206.5	1022	3	-47	-1444	3	134	multi-exon	FALSE	canonical	1	557697	junction_1	3982.0	NA	29	1	TRUE	NA	NA	NA	C	coding	122	369	56	424	70.0	4	True	NA	NA
PB.3550.21	chr14	+	2011	11	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34891	-184	no_combination_of_known_junctions	FALSE	canonical	1	5352	junction_1	137630.43943114474	NA	0	NA	TRUE	NA	NA	NA	B	coding	425	1278	181	1458	10.0	3	True	AATAAA	-14
PB.2717.1	chr12	+	2733	20	incomplete-splice_match	USP15	ENST00000280377.9	4748	22	-1	9721	0	6525	3prime_fragment	FALSE	canonical	1	199851	junction_6	126642.05354777609	NA	4	NA	TRUE	NA	NA	NA	C	coding	891	2673	60	2732	20.0	0	True	NA	NA
PB.278.5	chr1	+	6789	30	full-splice_match	ZMYM4	ENST00000314607.10	6994	30	-288	493	-288	-493	multi-exon	FALSE	canonical	1	61165	junction_1	89059.63306310061	NA	0	NA	TRUE	NA	NA	NA	C	coding	1548	4647	369	5015	30.0	-30	True	AATAAA	-15
PB.7533.8	chr21	-	5852	4	full-splice_match	ZBTB21	ENST00000398497.2	555	4	7	-5304	-2	-7	multi-exon	FALSE	canonical	1	9238	junction_2	4100.437564726748	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	401	3601	45.0	-6	True	AATAAA	-11
PB.278.7	chr1	+	5597	32	novel_not_in_catalog	ZMYM4	novel	6994	30	NA	NA	-272	-1765	any annotated donor/acceptor	FALSE	canonical	1	6876	junction_1	109771.62466161825	NA	18	1	TRUE	NA	NA	NA	C	coding	1516	4551	545	5095	50.0	-14	True	AATAAA	-16
PB.8151.3	chr3	+	2483	10	novel_in_catalog	PARP3	novel	2472	12	NA	NA	-44	2	intron_retention	FALSE	canonical	1	37492	junction_1	50195.289375659275	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	1143	2099	25.0	21	True	NA	NA
PB.278.1	chr1	+	5229	30	full-splice_match	ZMYM4	ENST00000314607.10	6994	30	0	1765	0	-1765	multi-exon	FALSE	canonical	1	61165	junction_1	89059.63306310061	NA	0	NA	TRUE	NA	NA	NA	C	coding	1548	4647	81	4727	50.0	0	True	AATAAA	-16
PB.2717.8	chr12	+	4418	22	full-splice_match	USP15	ENST00000280377.9	4748	22	27	303	-13	-303	multi-exon	FALSE	canonical	1	199851	junction_6	122294.57169881964	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	32	2977	35.0	-20	True	AATAAA	-19
PB.2717.9	chr12	+	3231	22	full-splice_match	USP15	ENST00000280377.9	4748	22	41	1476	1	0	multi-exon	FALSE	canonical	1	199851	junction_6	122294.57169881964	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	18	2963	20.0	-6	True	AATAAA	-16
PB.3534.2	chr14	+	2172	4	novel_not_in_catalog	TTC9	novel	5217	3	NA	NA	129	-2654	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	109642.17900465537	NA	1	NA	TRUE	NA	NA	NA	B	coding	14	45	577	621	35.0	0	True	ATTAAA	-13
PB.3534.1	chr14	+	2294	4	novel_not_in_catalog	TTC9	novel	5217	3	NA	NA	126	-2647	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	109642.17900465537	NA	1	NA	TRUE	NA	NA	NA	B	coding	14	45	692	736	30.0	-3	True	ATTAAA	-20
PB.6345.3	chr2	-	4934	28	full-splice_match	ATAD2B	ENST00000238789.9	8103	28	34	3135	-15	4	multi-exon	FALSE	canonical	1	37473	junction_7	22271.412623947275	NA	0	NA	TRUE	NA	NA	NA	C	coding	1458	4377	311	4687	15.0	-6	True	AATAAA	-17
PB.6345.2	chr2	-	8054	28	full-splice_match	ATAD2B	ENST00000238789.9	8103	28	39	10	-10	-3	multi-exon	FALSE	canonical	1	37473	junction_7	22271.412623947275	NA	2	NA	TRUE	NA	NA	NA	C	coding	1458	4377	306	4682	40.0	-1	True	AATAAA	-7
PB.8118.9	chr3	+	2395	22	novel_not_in_catalog	APEH	novel	3220	22	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	311402.30084039824	NA	7	1	TRUE	NA	NA	NA	C	coding	485	1458	29	1486	10.0	7	True	AATAAA	-10
PB.7397.2	chr20	+	2625	14	full-splice_match	OSBPL2	ENST00000313733.8	4010	14	57	1328	0	12	multi-exon	FALSE	canonical	1	260023	junction_9	44817.694220107995	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	185	1627	35.0	-22	True	ATTAAA	-13
PB.6345.7	chr2	-	4335	14	novel_not_in_catalog	ATAD2B	novel	8103	28	NA	NA	-19	2740	any annotated donor/acceptor	FALSE	canonical	1	306	junction_1	35917.23936377618	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	315	2009	20.0	-10	True	NA	NA
PB.6345.6	chr2	-	4719	21	incomplete-splice_match	ATAD2B	ENST00000238789.9	8103	28	-94	36055	-94	1036	3prime_fragment	FALSE	canonical	1	53898	junction_20	23061.764470438946	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	439	3426	25.0	1	True	ATTAAA	-15
PB.6345.5	chr2	-	3786	25	incomplete-splice_match	ATAD2B	ENST00000238789.9	8103	28	28	9362	-21	-3842	3prime_fragment	FALSE	canonical	1	37473	junction_4	23393.61299404029	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3468	317	3784	70.0	-12	True	AAGAAA	-18
PB.6345.4	chr2	-	4910	28	novel_in_catalog	ATAD2B	novel	8103	28	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	18517	junction_7	23933.69239909704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1453	4362	305	4666	15.0	0	True	AATAAA	-14
PB.10717.12	chr7	-	2505	16	novel_not_in_catalog	MCM7	novel	2515	14	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	6261	junction_3	840080.4600437481	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	116	2089	15.0	-31	True	AATAAA	-18
PB.9571.10	chr5	-	2495	25	full-splice_match	ANXA6	ENST00000523714.5	2451	25	-44	0	-29	0	multi-exon	FALSE	canonical	1	41075	junction_24	804727.6145414395	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	231	2156	35.0	-1	True	AAAACA	-19
PB.848.7	chr1	+	2664	6	novel_not_in_catalog	PEA15	novel	2471	4	NA	NA	5	-2	any annotated donor/acceptor	FALSE	canonical	1	527	junction_2	1552954.4584875114	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	321	776	35.0	1	True	AATAAA	-23
PB.7408.10	chr20	+	3189	13	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-23	-12	intron_retention	FALSE	canonical	1	16872	junction_6	101018.9723932534	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	228	1082	50.0	-25	True	ATTAAA	-3
PB.7408.11	chr20	+	3047	12	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	-22	-8	intron_retention	FALSE	canonical	1	11730	junction_2	95227.21949592784	NA	5	NA	TRUE	NA	NA	NA	C	coding	123	372	1587	1958	45.0	-24	True	ATTAAA	-7
PB.7408.12	chr20	+	3667	12	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-16	-8	intron_retention	FALSE	canonical	1	18487	junction_1	93000.86437019447	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	221	853	45.0	-18	True	ATTAAA	-7
PB.7408.13	chr20	+	3144	12	incomplete-splice_match	SLC17A9	ENST00000370351.8	3580	13	44	996	-16	-8	intron_retention	FALSE	canonical	1	76591	junction_5	67726.00568881929	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	141	1337	45.0	-18	True	ATTAAA	-7
PB.7408.14	chr20	+	4074	10	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-7	-8	intron_retention	FALSE	canonical	1	164449	junction_3	48128.684506445716	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	622	1260	45.0	-9	True	ATTAAA	-7
PB.7408.15	chr20	+	2593	14	full-splice_match	SLC17A9	ENST00000370349.7	2594	14	-7	8	-7	-8	multi-exon	FALSE	canonical	1	18487	junction_1	91040.18237345373	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	212	1504	45.0	-9	True	ATTAAA	-7
PB.7408.16	chr20	+	2511	13	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	1	16872	junction_5	76009.75145170519	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	132	1004	45.0	-9	True	ATTAAA	-7
PB.7408.17	chr20	+	3809	10	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-6	-8	intron_retention	FALSE	canonical	1	142234	junction_2	54998.04317080094	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	131	781	45.0	-8	True	ATTAAA	-7
PB.7408.18	chr20	+	3783	10	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	-6	-8	intron_retention	FALSE	canonical	1	11730	junction_2	83627.58222420799	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	2323	2694	45.0	-8	True	ATTAAA	-7
PB.7408.19	chr20	+	3057	12	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-6	-8	intron_retention	FALSE	canonical	1	16872	junction_5	78435.27980222226	NA	3	1	TRUE	NA	NA	NA	C	coding	275	828	131	958	45.0	-8	True	ATTAAA	-7
PB.2454.8	chr12	-	2412	7	novel_not_in_catalog	M6PR	novel	650	3	NA	NA	165	-15	any annotated donor/acceptor	TRUE	canonical	1	10738	junction_6	613242.0070352867	NA	1	1	TRUE	NA	NA	NA	C	coding	277	834	141	974	75.0	531	False	AAGAAA	-39
PB.2454.9	chr12	-	2375	7	novel_not_in_catalog	M6PR	novel	650	3	NA	NA	184	-15	any annotated donor/acceptor	FALSE	canonical	1	529	junction_6	616947.3554598615	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	458	937	75.0	550	False	AAGAAA	-39
PB.2454.2	chr12	-	2906	6	novel_in_catalog	M6PR	novel	650	3	NA	NA	0	-15	intron_retention	FALSE	canonical	1	695698	junction_5	404501.4168387547	NA	1	1	TRUE	NA	NA	NA	C	coding	244	735	160	894	75.0	-1	True	AAGAAA	-39
PB.2454.3	chr12	-	2910	6	novel_in_catalog	M6PR	novel	650	3	NA	NA	-22	-15	intron_retention	FALSE	canonical	1	30482	junction_5	662049.1615596534	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	518	898	75.0	-23	True	AAGAAA	-39
PB.2454.1	chr12	-	4394	5	novel_in_catalog	M6PR	novel	650	3	NA	NA	1	-15	intron_retention	FALSE	canonical	1	30482	junction_4	706550.8348563375	NA	13	NA	TRUE	NA	NA	NA	C	coding	126	381	2002	2382	75.0	0	True	AAGAAA	-39
PB.2454.6	chr12	-	2543	8	novel_in_catalog	M6PR	novel	650	3	NA	NA	-21	-15	no_combination_of_known_junctions	FALSE	canonical	1	1362	junction_6	739406.3312501566	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	626	1105	75.0	-22	True	AAGAAA	-39
PB.2454.7	chr12	-	2384	7	novel_in_catalog	M6PR	novel	650	3	NA	NA	-21	-65	combination_of_known_junctions	FALSE	canonical	1	30482	junction_6	606079.4296252669	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	517	996	75.0	-22	True	NA	NA
PB.2454.4	chr12	-	5538	3	full-splice_match	M6PR	ENST00000540837.1	648	3	-33	-4857	2	-15	multi-exon	FALSE	canonical	1	695698	junction_2	368630.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	124	375	158	532	75.0	1	True	AAGAAA	-39
PB.2454.5	chr12	-	2444	7	full-splice_match	M6PR	ENST00000000412.7	2756	7	297	15	-13	-15	multi-exon	FALSE	canonical	1	695698	junction_6	369279.61220823805	NA	8	1	TRUE	NA	NA	NA	C	coding	277	834	173	1006	75.0	-14	True	AAGAAA	-39
PB.7164.11	chr20	-	5650	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	25	-5	any annotated donor/acceptor	FALSE	canonical	1	11	junction_20	114634.96289356925	NA	5	NA	TRUE	NA	NA	NA	C	coding	672	2019	415	2433	35.0	-6	True	AATAAA	-11
PB.7164.13	chr20	-	5514	20	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	21	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	118150.72276599676	NA	10	NA	TRUE	NA	NA	NA	C	coding	491	1476	822	2297	35.0	-10	True	AATAAA	-11
PB.7164.12	chr20	-	5528	20	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	19	-5	any annotated donor/acceptor	FALSE	canonical	1	5276	junction_18	115879.755576913	NA	3	NA	TRUE	NA	NA	NA	C	coding	491	1476	836	2311	35.0	-12	True	AATAAA	-11
PB.7164.15	chr20	-	3595	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	0	879	any annotated donor/acceptor	FALSE	canonical	1	1199	junction_20	114559.43700634183	NA	2	1	TRUE	NA	NA	NA	C	coding	672	2019	378	2396	55.0	-31	True	AATAAA	-28
PB.7127.13	chr20	-	3931	14	full-splice_match	CSNK2A1	ENST00000217244.8	4390	14	61	398	-3	100	multi-exon	FALSE	canonical	1	76	junction_11	76517.77907915977	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	318	1493	75.0	-4	True	TTTAAA	-41
PB.7164.17	chr20	-	3737	22	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	6	879	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	120080.37300762684	NA	8	1	TRUE	NA	NA	NA	C	coding	396	1191	1348	2538	55.0	-25	True	AATAAA	-28
PB.7164.16	chr20	-	3905	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	31	879	any annotated donor/acceptor	FALSE	canonical	1	255	junction_20	114619.40717631548	NA	4	NA	TRUE	NA	NA	NA	C	coding	672	2019	688	2706	55.0	0	True	AATAAA	-28
PB.7164.19	chr20	-	3321	20	full-splice_match	GPCPD1	ENST00000379019.5	5489	20	76	2092	-26	845	multi-exon	FALSE	canonical	1	30025	junction_16	111115.82725336408	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	138	2156	55.0	-14	True	AATGAA	-5
PB.7164.18	chr20	-	3514	20	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	15	879	any annotated donor/acceptor	FALSE	canonical	1	5276	junction_18	115879.755576913	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	840	2315	55.0	-16	True	AATAAA	-28
PB.9571.12	chr5	-	2454	25	novel_in_catalog	ANXA6	novel	451	4	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	481592	junction_5	745557.4926041175	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	113	2116	35.0	12	True	AAAACA	-18
PB.7281.4	chr20	+	3873	13	novel_in_catalog	SRC	novel	446	3	NA	NA	-47	-8	no_combination_of_known_junctions	FALSE	canonical	1	12048	junction_2	93438.98482209304	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	228	1838	40.0	-4	True	ATTAAA	-15
PB.7281.1	chr20	+	4087	14	novel_in_catalog	SRC	novel	446	3	NA	NA	10	-6	combination_of_known_junctions	TRUE	canonical	1	27431	junction_1	78556.38504371299	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	440	2050	35.0	-23	True	ATTAAA	-17
PB.268.1	chr1	-	3858	5	full-splice_match	TRIM62	ENST00000291416.9	3437	5	-419	-2	-26	2	multi-exon	FALSE	canonical	1	51349	junction_4	8571.236623148377	NA	0	NA	TRUE	NA	NA	NA	A	coding	475	1428	654	2081	20.0	-6	False	ATTAAA	-21
PB.7281.3	chr20	+	4471	14	novel_not_in_catalog	SRC	novel	446	3	NA	NA	-67	-1	any annotated donor/acceptor	FALSE	canonical	1	6649	junction_3	91262.07492152613	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	731	2419	25.0	-24	True	ATTAAA	-32
PB.7281.2	chr20	+	4029	14	full-splice_match	SRC	ENST00000373578.6	4630	14	-33	634	-33	-6	multi-exon	FALSE	canonical	1	94619	junction_1	65335.87987645662	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	382	1992	35.0	10	True	ATTAAA	-17
PB.11582.1	chr9	-	2845	2	intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	63	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	193	582	1273	1854	70.0	NA	False	NA	NA
PB.1240.38	chr1	-	2899	13	novel_in_catalog	HNRNPU	novel	12852	2	NA	NA	-4	55	combination_of_known_junctions	FALSE	canonical	1	7753	junction_1	1702299.610918784	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	236	2584	20.0	-1	True	AGTAAA	-12
PB.4270.12	chr16	-	2305	9	incomplete-splice_match	MARF1	ENST00000551742.5	5900	27	-50	28847	8	-3525	3prime_fragment	FALSE	canonical	1	40899	junction_2	64000.323877598465	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2103	203	2305	35.0	-13	True	NA	NA
PB.4270.13	chr16	-	2122	8	incomplete-splice_match	MARF1	ENST00000396368.7	7743	27	10	31014	10	-3907	3prime_fragment	FALSE	canonical	1	108748	junction_7	46266.82673495611	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1920	201	2120	70.0	-11	True	NA	NA
PB.4270.11	chr16	-	5189	27	full-splice_match	MARF1	ENST00000396368.7	7743	27	20	2534	-4	-153	multi-exon	FALSE	canonical	1	108748	junction_26	51465.972743703394	NA	0	NA	TRUE	NA	NA	NA	C	coding	1666	4998	191	5188	60.0	-1	True	TTTAAA	-3
PB.7300.1	chr20	+	1700	14	full-splice_match	IFT52	ENST00000373030.7	1757	14	-15	72	-15	2	multi-exon	FALSE	canonical	1	143386	junction_1	80263.63990849747	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	146	1459	25.0	-21	False	ATTAAA	-34
PB.6820.1	chr2	+	3376	17	novel_not_in_catalog	BBS5	novel	3475	12	NA	NA	-8	19600	any annotated donor/acceptor	FALSE	canonical	1	676	junction_11	341389.8035801368	NA	1	NA	TRUE	NA	NA	NA	A	coding	918	2757	61	2817	20.0	-3	True	AGTAAA	-14
PB.4270.14	chr16	-	2078	9	novel_not_in_catalog	MARF1	novel	7743	27	NA	NA	-14	-3907	any annotated donor/acceptor	FALSE	canonical	1	371	junction_8	90756.38136026234	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1920	157	2076	70.0	140	False	NA	NA
PB.4270.15	chr16	-	1891	8	incomplete-splice_match	MARF1	ENST00000551742.5	5900	27	6	29403	6	-4081	3prime_fragment	FALSE	canonical	1	40899	junction_1	68336.33963786795	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1743	147	1889	50.0	43	True	NA	NA
PB.6360.12	chr2	+	3424	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-3	114	0	-114	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	503	1105	25.0	23	True	ATTAAA	-19
PB.6360.13	chr2	+	2992	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	1	542	1	-542	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	499	1101	60.0	27	True	AGTAAA	-36
PB.6360.10	chr2	+	3541	6	novel_not_in_catalog	RAB10	novel	1292	5	NA	NA	-6	-46	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	686456.6231104191	NA	82	2	TRUE	NA	NA	NA	C	coding	119	360	509	868	15.0	17	True	AATAAA	-12
PB.6360.11	chr2	+	3239	7	novel_not_in_catalog	RAB10	novel	1292	5	NA	NA	-4	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	633563.7249349684	NA	3	1	TRUE	NA	NA	NA	C	coding	200	603	203	805	5.0	19	True	TATAAA	-20
PB.240.16	chr1	-	3741	20	novel_in_catalog	PUM1	novel	4631	18	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	1	40640	junction_17	158564.80924789936	NA	1	1	TRUE	NA	NA	NA	C	coding	1090	3273	117	3389	75.0	-4	True	NA	NA
PB.6360.14	chr2	+	2881	5	incomplete-splice_match	RAB10	ENST00000473035.1	571	6	159	-2385	159	-1	5prime_fragment	FALSE	canonical	1	1395684	junction_1	211250.7273838069	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	93	449	5.0	NA	False	TATAAA	-18
PB.3457.6	chr14	+	4355	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	391066.0350046389	NA	1	NA	TRUE	NA	NA	NA	C	coding	1300	3903	302	4204	75.0	-34	True	NA	NA
PB.3457.7	chr14	+	3759	38	incomplete-splice_match	KTN1	ENST00000395314.7	4618	44	-109	11899	-2	-17	3prime_fragment	FALSE	canonical	1	252824	junction_1	332222.26668281	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3582	178	3759	60.0	-34	True	NA	NA
PB.3457.4	chr14	+	4001	41	novel_in_catalog	KTN1	novel	291	2	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	2222	junction_1	361351.2217976015	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	178	3528	30.0	-35	True	AATAAA	-17
PB.3457.5	chr14	+	2981	28	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-108	30981	-3	723	3prime_fragment	FALSE	canonical	1	252824	junction_1	260606.82722165532	NA	1	NA	TRUE	NA	NA	NA	C	coding	934	2802	179	2980	40.0	-35	True	NA	NA
PB.3457.2	chr14	+	4645	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	252824	junction_1	369320.46547478886	NA	1	NA	TRUE	NA	NA	NA	C	coding	1328	3987	179	4165	20.0	-35	True	AATAAA	-24
PB.3457.3	chr14	+	4237	42	full-splice_match	KTN1	ENST00000438792.6	4449	42	-108	320	-3	-1	multi-exon	FALSE	canonical	1	252824	junction_1	340822.79097600124	NA	1	NA	TRUE	NA	NA	NA	C	coding	1300	3903	179	4081	65.0	-35	True	TTTAAA	-3
PB.3457.1	chr14	+	2785	25	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-112	32652	-7	-948	3prime_fragment	FALSE	canonical	1	252824	junction_1	259868.73047150797	NA	1	NA	TRUE	NA	NA	NA	C	coding	867	2601	183	2783	30.0	-39	True	NA	NA
PB.7310.6	chr20	+	4344	15	novel_not_in_catalog	PABPC1L	novel	1263	8	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	99852.56395786331	NA	2	NA	TRUE	NA	NA	NA	B	coding	330	993	78	1070	10.0	7	True	ATTAAA	-17
PB.7310.4	chr20	+	4276	14	novel_not_in_catalog	PABPC1L	novel	1263	8	NA	NA	-5	2	intron_retention	FALSE	non_canonical	0	0	junction_8	83569.33936707003	NA	3	1	TRUE	NA	NA	NA	B	coding	330	993	88	1080	10.0	-3	True	ATTAAA	-16
PB.7310.5	chr20	+	4192	13	novel_not_in_catalog	PABPC1L	novel	1263	8	NA	NA	4	2	intron_retention	FALSE	non_canonical	0	0	junction_8	88655.80989844941	NA	5	1	TRUE	NA	NA	NA	B	coding	330	993	79	1071	10.0	6	True	ATTAAA	-16
PB.7310.2	chr20	+	4172	13	novel_not_in_catalog	PABPC1L	novel	1263	8	NA	NA	-27	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	97320.29675752239	NA	2	NA	TRUE	NA	NA	NA	B	coding	330	993	110	1102	15.0	-86	False	ATTAAA	-12
PB.7310.3	chr20	+	4335	13	novel_in_catalog	PABPC1L	novel	1263	8	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	149443	junction_2	58368.06353910977	NA	3	NA	TRUE	NA	NA	NA	B	coding	330	993	98	1090	10.0	-74	False	ATTAAA	-17
PB.3457.8	chr14	+	4852	45	novel_in_catalog	KTN1	novel	291	2	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	416491.18834195926	NA	1	NA	TRUE	NA	NA	NA	C	coding	1357	4074	299	4372	20.0	-31	True	AATAAA	-24
PB.3457.9	chr14	+	4765	44	novel_in_catalog	KTN1	novel	291	2	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	396792.4965158144	NA	1	NA	TRUE	NA	NA	NA	C	coding	1329	3990	297	4286	20.0	-29	True	AATAAA	-23
PB.1051.53	chr1	+	5933	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	1	553	combination_of_known_junctions	FALSE	canonical	1	19678	junction_6	191650.6123890845	NA	5	NA	TRUE	NA	NA	NA	C	coding	810	2433	348	2780	25.0	84	False	NA	NA
PB.6592.2	chr2	-	1242	10	full-splice_match	CAPG	ENST00000263867.8	1442	10	190	10	7	-5	multi-exon	FALSE	canonical	1	496949	junction_9	340241.0247323411	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	61	1107	10.0	1	True	AATAAA	-29
PB.5575.1	chr19	-	1258	3	full-splice_match	UQCR11	ENST00000591899.7	1324	3	20	46	3	-46	multi-exon	FALSE	canonical	1	4590585	junction_2	27196.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-9	True	NA	NA
PB.5575.3	chr19	-	1615	2	full-splice_match	UQCR11	ENST00000585671.2	753	2	11	-873	11	0	multi-exon	FALSE	canonical	1	4590585	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	289	693	10.0	-1	True	ATTAAA	-16
PB.5575.2	chr19	-	2446	2	full-splice_match	UQCR11	ENST00000585671.2	753	2	11	-1704	11	-46	multi-exon	FALSE	canonical	1	4590585	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	289	693	85.0	-1	True	NA	NA
PB.9927.4	chr6	+	2978	10	novel_in_catalog	KIFC1	novel	2706	11	NA	NA	-37	-4	intron_retention	TRUE	canonical	1	331079	junction_1	104742.46811225575	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	163	1767	30.0	-35	True	NA	NA
PB.5487.6	chr18	+	2518	10	novel_not_in_catalog	POLI	novel	6133	10	NA	NA	-2	2	any annotated donor/acceptor	FALSE	canonical	1	4428	junction_1	42485.50999262376	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	241	2259	35.0	-43	True	AATAAA	-20
PB.9927.6	chr6	+	2387	11	full-splice_match	KIFC1	ENST00000428849.6	2706	11	289	30	-36	-30	multi-exon	FALSE	canonical	1	331079	junction_1	113955.40265230955	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	162	2183	40.0	-34	True	AATAAA	-21
PB.11017.1	chr8	+	2639	1	antisense	novelGene_PHYHIP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-5240	False	AATAAA	-11
PB.4086.9	chr15	-	2923	13	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	1	33284	junction_2	257703.22000902673	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	128	1837	40.0	-10	True	NA	NA
PB.4086.8	chr15	-	2943	13	novel_in_catalog	PRC1	novel	3034	15	NA	NA	16	5	combination_of_known_junctions	FALSE	canonical	1	24079	junction_12	259450.5610166495	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	193	1857	40.0	-1	True	NA	NA
PB.240.6	chr1	-	3894	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-9	73	combination_of_known_junctions	FALSE	canonical	1	34118	junction_8	161613.35651981243	NA	1	NA	TRUE	NA	NA	NA	C	coding	1108	3327	110	3436	85.0	3	True	NA	NA
PB.9927.7	chr6	+	5156	10	incomplete-splice_match	KIFC1	ENST00000428849.6	2706	11	292	28	-33	-28	intron_retention	FALSE	canonical	1	331079	junction_1	117065.95160321139	NA	2	NA	TRUE	NA	NA	NA	C	coding	674	2025	159	2183	35.0	-31	True	AATAAA	-23
PB.240.1	chr1	-	4136	22	full-splice_match	PUM1	ENST00000426105.6	4043	22	-20	-73	-11	73	multi-exon	FALSE	canonical	1	222948	junction_14	124988.03803664347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1188	3567	112	3678	85.0	1	True	NA	NA
PB.240.2	chr1	-	4276	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	66	73	combination_of_known_junctions	FALSE	canonical	1	7660	junction_21	157663.17735611956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1225	3678	141	3818	85.0	-209	False	NA	NA
PB.240.3	chr1	-	4119	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-3	73	combination_of_known_junctions	FALSE	canonical	1	162882	junction_14	131440.6360034049	NA	1	1	TRUE	NA	NA	NA	C	coding	1187	3564	98	3661	85.0	15	True	NA	NA
PB.4086.1	chr15	-	3125	13	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-17	-4	intron_retention	FALSE	canonical	1	164334	junction_1	194527.50461288673	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	768	2036	25.0	-20	True	NA	NA
PB.4086.3	chr15	-	3025	14	full-splice_match	PRC1	ENST00000361188.9	4087	14	1095	-33	1	6	multi-exon	FALSE	canonical	1	164334	junction_1	186985.967524288	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	118	1938	35.0	0	True	NA	NA
PB.4086.2	chr15	-	3072	15	full-splice_match	PRC1	ENST00000394249.7	3034	15	-44	6	-2	6	multi-exon	FALSE	canonical	1	162954	junction_1	221791.0794166001	NA	1	NA	TRUE	NA	NA	NA	C	coding	620	1863	123	1985	35.0	-5	True	NA	NA
PB.4086.5	chr15	-	3590	12	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-20	5	intron_retention	FALSE	canonical	1	164334	junction_1	202927.37027386043	NA	1	NA	TRUE	NA	NA	NA	C	coding	380	1143	1362	2504	40.0	-23	True	NA	NA
PB.4086.4	chr15	-	2547	14	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-3	6	no_combination_of_known_junctions	FALSE	canonical	1	19386	junction_1	218500.43034464004	NA	10	1	TRUE	NA	NA	NA	C	coding	607	1824	189	2012	35.0	1	True	NA	NA
PB.4086.7	chr15	-	2948	14	novel_in_catalog	PRC1	novel	3034	15	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	166636	junction_1	186507.03861861094	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	119	1819	40.0	-1	True	NA	NA
PB.4086.6	chr15	-	3078	15	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-21	5	combination_of_known_junctions	FALSE	canonical	1	32440	junction_2	244045.70176055346	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	207	1898	40.0	27	False	NA	NA
PB.1116.17	chr1	+	3400	7	novel_in_catalog	VASH2	novel	1369	9	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	1	6162	junction_4	27583.983972688853	NA	3	NA	TRUE	NA	NA	NA	C	coding	232	699	382	1080	85.0	11	True	NA	NA
PB.9927.3	chr6	+	3430	10	incomplete-splice_match	KIFC1	ENST00000428849.6	2706	11	278	1768	-47	1066	3prime_fragment	FALSE	canonical	1	331079	junction_1	117065.95160321139	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	173	2197	30.0	-45	True	NA	NA
PB.250.1	chr1	+	2299	1	incomplete-splice_match	KPNA6	ENST00000373625.7	7378	14	65446	786	16622	-786	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-8639	False	NA	NA
PB.5283.15	chr17	-	2710	19	novel_in_catalog	TMC6	novel	5268	20	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	17198	junction_18	139596.97900194378	NA	3	1	TRUE	NA	NA	NA	C	coding	578	1737	751	2487	15.0	-16	True	ATTAAA	-11
PB.5283.14	chr17	-	3190	19	novel_in_catalog	TMC6	novel	5268	20	NA	NA	9	0	intron_retention	FALSE	canonical	1	97818	junction_18	104333.01585138359	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	1462	2967	15.0	12	True	ATTAAA	-11
PB.5283.17	chr17	-	2727	19	novel_in_catalog	TMC6	novel	5268	20	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	4724	junction_18	133425.87809597547	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	270	2507	15.0	16	True	ATTAAA	-8
PB.5283.11	chr17	-	2676	19	novel_in_catalog	TMC6	novel	5268	20	NA	NA	-22	0	no_combination_of_known_junctions	FALSE	canonical	1	9361	junction_4	140965.7402845755	NA	1	1	TRUE	NA	NA	NA	C	coding	714	2145	164	2308	0.0	-13	True	ATTAAA	-17
PB.5283.10	chr17	-	2661	19	novel_in_catalog	TMC6	novel	5268	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	85939	junction_7	120907.0823914912	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2238	195	2432	0.0	23	True	ATTAAA	-17
PB.5283.13	chr17	-	2338	18	novel_not_in_catalog	TMC6	novel	5268	20	NA	NA	11	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	138635.61610980539	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	150	2114	10.0	-1	True	ATTAAA	-12
PB.9473.2	chr5	-	3456	15	novel_in_catalog	CDC23	novel	3155	16	NA	NA	0	-10	intron_retention	FALSE	canonical	1	222849	junction_12	41459.44475746074	NA	3	1	TRUE	NA	NA	NA	C	coding	429	1290	12	1301	50.0	-1	True	AATAAA	-8
PB.9473.3	chr5	-	2987	15	novel_in_catalog	CDC23	novel	3155	16	NA	NA	0	-10	no_combination_of_known_junctions	TRUE	canonical	1	1909	junction_13	90892.78209112815	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	12	1667	50.0	-1	True	AATAAA	-8
PB.9473.1	chr5	-	3023	16	full-splice_match	CDC23	ENST00000394886.6	3155	16	122	10	-6	-10	multi-exon	FALSE	canonical	1	222849	junction_13	40214.30836704766	NA	8	2	TRUE	NA	NA	NA	C	coding	514	1545	159	1703	50.0	101	False	AATAAA	-8
PB.2975.1	chr12	+	2719	2	incomplete-splice_match	SETD1B	ENST00000542440.5	8185	18	23760	-69	23202	69	5prime_fragment	FALSE	canonical	1	205417	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	99	300	6	305	15.0	4190	False	TATAAA	-31
PB.9473.4	chr5	-	2640	16	full-splice_match	CDC23	ENST00000394886.6	3155	16	10	505	10	-505	multi-exon	FALSE	canonical	1	222849	junction_13	40214.30836704766	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	22	1815	35.0	-11	True	AATAAA	-27
PB.10739.2	chr7	-	2175	5	novel_in_catalog	ACHE	novel	2168	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	10264	junction_4	42580.97806753034	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	111	1955	15.0	-1	True	AATAAA	-13
PB.10739.3	chr7	-	2924	5	full-splice_match	ACHE	ENST00000302913.8	2956	5	32	0	-2	0	multi-exon	FALSE	canonical	1	18904	junction_4	46373.98805567082	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	108	1961	20.0	-1	True	AATAAA	-12
PB.10739.1	chr7	-	2522	4	novel_in_catalog	ACHE	novel	2168	5	NA	NA	-2	4	intron_retention	FALSE	canonical	1	18904	junction_3	45115.53007064813	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	108	1190	20.0	-1	True	AATAAA	-17
PB.10739.6	chr7	-	2239	5	full-splice_match	ACHE	ENST00000302913.8	2956	5	0	717	0	4	multi-exon	FALSE	canonical	1	18904	junction_4	46373.98805567082	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	140	1993	25.0	1073	False	TATAAA	-19
PB.10739.4	chr7	-	1909	5	novel_in_catalog	ACHE	novel	2168	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	4755	junction_3	50785.086506768894	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	110	1690	20.0	0	True	AATAAA	-12
PB.10739.5	chr7	-	2552	4	novel_in_catalog	ACHE	novel	2168	5	NA	NA	-1	4	intron_retention	FALSE	canonical	1	18904	junction_3	51620.6284799659	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	107	1189	25.0	0	True	TATAAA	-19
PB.5113.19	chr17	+	2673	17	full-splice_match	SPATA20	ENST00000503127.5	2734	17	60	1	3	-1	multi-exon	FALSE	canonical	1	105761	junction_1	125234.854108441	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	471	2486	20.0	13	True	AATAAA	-19
PB.5113.18	chr17	+	2951	14	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	3	-1	intron_retention	FALSE	canonical	1	24975	junction_1	142693.25402116223	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	23	1231	20.0	13	True	AATAAA	-19
PB.1223.9	chr1	-	2026	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	24	2109	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	4	1	TRUE	NA	NA	NA	B	coding	244	735	179	913	10.0	-4	True	NA	NA
PB.5569.5	chr19	+	5579	11	novel_in_catalog	DAZAP1	novel	2290	13	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	812601	junction_1	326928.3658639764	NA	4	NA	TRUE	NA	NA	NA	C	coding	235	708	4103	4810	20.0	0	True	AATAAA	-21
PB.5569.2	chr19	+	2100	11	novel_in_catalog	DAZAP1	novel	2290	13	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	1	121073	junction_6	464814.69923324283	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	810	1331	20.0	-4	True	AATAAA	-21
PB.5569.3	chr19	+	1645	12	full-splice_match	DAZAP1	ENST00000233078.8	2160	12	-27	542	17	-538	multi-exon	FALSE	canonical	1	812601	junction_1	352195.9514819101	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	189	1412	45.0	-2	True	AATAAA	-30
PB.5569.1	chr19	+	1816	12	full-splice_match	DAZAP1	ENST00000233078.8	2160	12	-28	372	16	-368	multi-exon	FALSE	canonical	1	812601	junction_1	352195.9514819101	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	190	1413	25.0	-3	True	AATATA	-44
PB.5113.11	chr17	+	2582	16	full-splice_match	SPATA20	ENST00000356488.8	2634	16	49	3	-5	-1	multi-exon	FALSE	canonical	1	24975	junction_1	136461.86390561855	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	35	2395	20.0	1	True	AATAAA	-19
PB.5113.10	chr17	+	2872	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-5	0	intron_retention	FALSE	canonical	1	24975	junction_1	139704.16232862882	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	35	1747	20.0	1	True	AATAAA	-20
PB.5113.13	chr17	+	3061	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	0	-1	intron_retention	FALSE	canonical	1	105761	junction_1	130489.5966823073	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	478	1341	20.0	6	True	AATAAA	-19
PB.5113.12	chr17	+	2672	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	24975	junction_1	139341.26952440714	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1412	2485	20.0	3	True	AATAAA	-19
PB.5113.15	chr17	+	2568	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-1	0	intron_retention	FALSE	canonical	1	15395	junction_6	166903.51205130832	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	1019	2380	20.0	9	True	AATAAA	-20
PB.5113.14	chr17	+	2716	16	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	2	0	intron_retention	FALSE	canonical	1	79433	junction_1	131993.12107419336	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1455	2528	20.0	8	True	AATAAA	-20
PB.5113.17	chr17	+	2794	18	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	8645	junction_2	173613.07408341125	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	246	2606	20.0	12	True	AATAAA	-20
PB.5113.16	chr17	+	2856	14	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	15395	junction_6	172692.63479886786	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	1018	1731	20.0	10	True	AATAAA	-20
PB.2969.3	chr12	+	2365	6	full-splice_match	RNF34	ENST00000361234.9	2066	6	61	-360	-17	359	multi-exon	FALSE	canonical	1	329367	junction_2	147667.05191260506	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	112	1230	95.0	-27	False	NA	NA
PB.2969.2	chr12	+	2081	7	full-splice_match	RNF34	ENST00000392465.7	2051	7	-28	-2	8	1	multi-exon	FALSE	canonical	1	52715	junction_1	243468.92653119002	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	186	1307	10.0	-38	False	AATAAA	-18
PB.2969.1	chr12	+	4355	5	novel_in_catalog	RNF34	novel	2066	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	329367	junction_2	131377.46222882942	NA	2	NA	TRUE	NA	NA	NA	C	coding	106	321	3259	3579	15.0	-1	True	AATAAA	-20
PB.1362.8	chr10	-	4308	16	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-77	-1	any annotated donor/acceptor	FALSE	canonical	1	381	junction_3	2052832.9034402191	NA	4	1	TRUE	NA	NA	NA	C	coding	798	2397	735	3131	20.0	-11	True	ATTAAA	-24
PB.2969.7	chr12	+	2151	7	novel_not_in_catalog	RNF34	novel	2066	6	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	326	junction_2	265377.4034582112	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	315	1376	15.0	-4	True	AATAAA	-19
PB.2969.6	chr12	+	2202	6	novel_not_in_catalog	RNF34	novel	2066	6	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	5349	junction_5	240046.54314778207	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	96	1067	15.0	-11	True	AATAAA	-19
PB.2969.5	chr12	+	3118	5	novel_in_catalog	RNF34	novel	2066	6	NA	NA	-13	-6	intron_retention	FALSE	canonical	1	334995	junction_1	145473.72381035003	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	1441	2352	30.0	-23	True	AATAAA	-10
PB.2969.4	chr12	+	2066	7	novel_not_in_catalog	RNF34	novel	2066	6	NA	NA	-17	1	any annotated donor/acceptor	FALSE	canonical	1	2117	junction_5	263193.42033294745	NA	4	NA	TRUE	NA	NA	NA	C	coding	318	957	112	1068	10.0	-27	False	AATAAA	-18
PB.1362.3	chr10	-	4162	16	full-splice_match	ITGB1	ENST00000302278.7	3640	16	-42	-480	-19	407	multi-exon	FALSE	canonical	1	381	junction_3	1886954.2506506746	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	108	2504	55.0	-32	True	AATATA	-19
PB.1362.2	chr10	-	4559	16	full-splice_match	ITGB1	ENST00000302278.7	3640	16	-71	-848	-48	775	multi-exon	FALSE	canonical	1	381	junction_3	1886954.2506506746	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	137	2533	40.0	20	False	AATATA	-13
PB.2969.9	chr12	+	2530	6	full-splice_match	RNF34	ENST00000361234.9	2066	6	86	-550	-1	549	multi-exon	FALSE	canonical	1	329367	junction_2	147667.05191260506	NA	6	1	TRUE	NA	NA	NA	C	coding	372	1119	87	1205	35.0	-2	True	NA	NA
PB.2969.8	chr12	+	1981	6	full-splice_match	RNF34	ENST00000361234.9	2066	6	84	1	-3	1	multi-exon	FALSE	canonical	1	329367	junction_2	147667.05191260506	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	89	1207	10.0	-4	True	AATAAA	-18
PB.1362.7	chr10	-	3792	16	full-splice_match	ITGB1	ENST00000396033.6	3784	16	-83	75	-83	-2	multi-exon	FALSE	canonical	1	381	junction_3	2048315.0837756381	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	220	2616	20.0	-17	True	ATTAAA	-23
PB.1362.6	chr10	-	3625	16	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1886999.7395622667	NA	22	3	TRUE	NA	NA	NA	C	coding	792	2379	70	2448	20.0	6	True	ATTAAA	-24
PB.1362.5	chr10	-	3651	16	full-splice_match	ITGB1	ENST00000302278.7	3640	16	-20	9	-2	-9	multi-exon	FALSE	canonical	1	381	junction_3	1886954.2506506746	NA	12	1	TRUE	NA	NA	NA	C	coding	798	2397	86	2482	25.0	-10	True	ATTAAA	-16
PB.1362.4	chr10	-	3876	17	novel_in_catalog	ITGB1	novel	3729	16	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	381	junction_3	2129431.7520128447	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	304	2700	20.0	-11	True	ATTAAA	-23
PB.217.1	chr1	+	2579	5	novel_in_catalog	THEMIS2	novel	2337	7	NA	NA	-4	4	intron_retention	FALSE	canonical	1	5895	junction_1	165832.53889466324	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	34	1824	40.0	-5	True	AATAAA	-24
PB.11245.1	chr8	-	2668	12	full-splice_match	CCNE2	ENST00000308108.8	2724	12	53	3	0	-3	multi-exon	FALSE	canonical	1	39343	junction_11	35223.73454935331	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	52	1266	25.0	-1	True	AATAAA	-26
PB.6690.1	chr2	-	4692	6	novel_in_catalog	MIR4435-2HG	novel	575	4	NA	NA	-3	-25	combination_of_known_junctions	FALSE	canonical	1	13896	junction_1	28496.780180223872	NA	1	NA	TRUE	NA	NA	NA	B	coding	150	453	3212	3664	75.0	NA	False	NA	NA
PB.6690.2	chr2	-	3770	5	novel_in_catalog	MIR4435-2HG	novel	575	4	NA	NA	0	1926	combination_of_known_junctions	FALSE	canonical	1	14020	junction_3	28105.532885003267	NA	3	NA	TRUE	NA	NA	NA	B	coding	140	423	2976	3398	40.0	NA	False	AATAAA	-18
PB.11245.2	chr8	-	2530	11	novel_in_catalog	CCNE2	novel	3330	12	NA	NA	0	-6	no_combination_of_known_junctions	FALSE	canonical	1	848	junction_3	54195.460478161825	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	52	1131	40.0	-1	True	AATAAA	-23
PB.11245.5	chr8	-	2312	12	full-splice_match	CCNE2	ENST00000308108.8	2724	12	53	359	0	-359	multi-exon	FALSE	canonical	1	39343	junction_11	35223.73454935331	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	52	1266	65.0	-1	True	ATTAAA	-31
PB.11245.4	chr8	-	2620	12	novel_not_in_catalog	CCNE2	novel	3330	12	NA	NA	0	-38	any annotated donor/acceptor	FALSE	canonical	1	460	junction_8	51269.824852570186	NA	6	NA	TRUE	NA	NA	NA	C	coding	288	867	387	1253	80.0	-1	True	TATAAA	-40
PB.807.21	chr1	-	2801	12	full-splice_match	YY1AP1	ENST00000361831.9	2743	12	-68	10	1	-10	multi-exon	FALSE	canonical	1	5515	junction_9	277487.0973862293	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	381	2600	15.0	0	True	NA	NA
PB.946.2	chr1	-	5031	1	incomplete-splice_match	RC3H1	ENST00000258349.8	10988	19	56817	3	5202	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	1269	False	ATTAAA	-16
PB.7627.20	chr22	+	3210	17	full-splice_match	MED15	ENST00000406969.5	3210	17	0	0	0	0	multi-exon	FALSE	canonical	1	10541	junction_1	242469.96854758085	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	129	2297	15.0	2	True	AATAAA	-16
PB.7627.21	chr22	+	3333	17	novel_not_in_catalog	MED15	novel	590	6	NA	NA	1582	1	intron_retention	FALSE	canonical	1	275	junction_1	243895.9520653015	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	251	2419	15.0	1587	False	AATAAA	-17
PB.7627.22	chr22	+	3292	18	novel_not_in_catalog	MED15	novel	590	6	NA	NA	1740	-2	intron_retention	FALSE	canonical	1	275	junction_1	252765.35680693475	NA	2	1	TRUE	NA	NA	NA	C	coding	762	2289	93	2381	15.0	1745	False	AATAAA	-14
PB.7627.23	chr22	+	3412	18	novel_in_catalog	MED15	novel	590	6	NA	NA	15	0	intron_retention	FALSE	canonical	1	1095	junction_1	252665.6050336027	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	209	2497	15.0	-155	False	AATAAA	-18
PB.7627.24	chr22	+	3204	17	novel_in_catalog	MED15	novel	590	6	NA	NA	104	1	intron_retention	FALSE	canonical	1	1095	junction_1	243781.42684443496	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	120	2288	15.0	-4	True	AATAAA	-19
PB.8426.2	chr3	+	4253	6	novel_in_catalog	MRAS	novel	4377	5	NA	NA	12	-11	combination_of_known_junctions	FALSE	canonical	1	31230	junction_1	113223.6669651712	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	374	1000	35.0	-552	False	NA	NA
PB.8426.1	chr3	+	4049	6	full-splice_match	MRAS	ENST00000423968.6	1803	6	156	-2402	-38	0	multi-exon	FALSE	canonical	1	68227	junction_1	99226.36571798849	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	159	785	10.0	-7	True	NA	NA
PB.832.2	chr1	+	2081	7	full-splice_match	PRCC	ENST00000271526.8	2105	7	26	-2	26	2	multi-exon	FALSE	canonical	1	461352	junction_1	222809.60388144306	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	247	1722	5.0	-9	False	AATAAA	-22
PB.807.22	chr1	-	2249	8	novel_not_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28521	-44730	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	300652.470086752	NA	2	1	TRUE	NA	NA	NA	B	coding	406	1221	828	2048	15.0	7	True	NA	NA
PB.5487.1	chr18	+	4191	9	novel_in_catalog	POLI	novel	6133	10	NA	NA	-15	2	intron_retention	FALSE	canonical	1	123812	junction_3	8785.995944363678	NA	3	NA	TRUE	NA	NA	NA	C	coding	672	2019	1914	3932	35.0	-56	True	AATAAA	-20
PB.10967.1	chr8	-	5883	35	novel_in_catalog	CSMD1	novel	12134	56	NA	NA	71	237	combination_of_known_junctions	TRUE	canonical	1	1626	junction_34	3312.085213829472	NA	2	1	TRUE	NA	NA	NA	B	coding	1707	5124	37	5160	35.0	17	True	AATAAA	-26
PB.11251.3	chr8	-	4275	7	incomplete-splice_match	MTERF3	ENST00000287025.3	1409	8	-48	-18	-27	7	intron_retention	FALSE	canonical	1	229260	junction_4	41481.950354608714	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	2948	4201	20.0	-30	False	AATAAA	-21
PB.10967.2	chr8	-	4230	27	novel_in_catalog	CSMD1	novel	12134	56	NA	NA	68	-22982	combination_of_known_junctions	FALSE	canonical	1	1626	junction_26	3036.6964688271005	NA	1	NA	TRUE	NA	NA	NA	B	coding	1410	4230	1	4230	30.0	14	True	TATAAA	-16
PB.124.5	chr1	-	3957	29	novel_not_in_catalog	ATP13A2	novel	3840	29	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	14907	junction_14	139873.51076634217	NA	1	NA	TRUE	NA	NA	NA	C	coding	1175	3528	168	3695	0.0	22	True	AATAAA	-19
PB.11251.5	chr8	-	2684	7	novel_in_catalog	MTERF3	novel	1529	9	NA	NA	0	1	intron_retention	FALSE	canonical	1	166696	junction_6	60319.27819367168	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	1726	2616	20.0	-3	True	AATAAA	-15
PB.9059.14	chr4	-	4510	27	incomplete-splice_match	DDX60L	ENST00000505890.5	4568	30	-5	5233	-1	381	3prime_fragment	FALSE	canonical	1	33876	junction_26	39029.74600095942	NA	1	NA	TRUE	NA	NA	NA	C	coding	1237	3714	227	3940	30.0	-6	True	NA	NA
PB.9059.15	chr4	-	4489	27	novel_in_catalog	DDX60L	novel	6754	38	NA	NA	-2	380	combination_of_known_junctions	FALSE	canonical	1	15314	junction_26	40922.86481908958	NA	1	NA	TRUE	NA	NA	NA	C	coding	1236	3711	210	3920	35.0	-3	True	NA	NA
PB.9059.16	chr4	-	2548	16	novel_not_in_catalog	DDX60L	novel	6754	38	NA	NA	-27	-7815	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_15	53009.08478851106	NA	2	NA	TRUE	NA	NA	NA	C	coding	701	2103	444	2546	30.0	743	False	NA	NA
PB.9059.17	chr4	-	2455	16	novel_in_catalog	DDX60L	novel	6754	38	NA	NA	0	-7815	combination_of_known_junctions	FALSE	canonical	1	4429	junction_15	51651.114545530916	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2103	351	2453	30.0	-5	True	NA	NA
PB.9059.10	chr4	-	6508	39	novel_not_in_catalog	DDX60L	novel	3509	9	NA	NA	0	-414	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_38	42949.482196982535	NA	1	NA	TRUE	NA	NA	NA	C	coding	1706	5121	390	5510	50.0	-1	True	NA	NA
PB.9059.11	chr4	-	6391	38	novel_in_catalog	DDX60L	novel	3509	9	NA	NA	-21	-414	combination_of_known_junctions	FALSE	canonical	1	33876	junction_37	37441.858839580054	NA	2	1	TRUE	NA	NA	NA	C	coding	1707	5124	270	5393	50.0	749	False	NA	NA
PB.9059.12	chr4	-	6470	30	novel_in_catalog	DDX60L	novel	6754	38	NA	NA	-2	7614	combination_of_known_junctions	FALSE	canonical	1	33876	junction_29	38999.79863907284	NA	2	NA	TRUE	NA	NA	NA	C	coding	1390	4173	228	4400	50.0	-7	True	AATAAA	-12
PB.9059.13	chr4	-	4467	30	incomplete-splice_match	DDX60L	ENST00000511577.5	6781	38	23	27751	0	5616	3prime_fragment	FALSE	canonical	1	33876	junction_29	39151.586486306885	NA	0	NA	TRUE	NA	NA	NA	C	coding	1389	4170	226	4395	15.0	-5	True	AATAAA	-26
PB.807.23	chr1	-	2894	9	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28441	-44731	intron_retention	FALSE	canonical	1	22151	junction_8	256489.00893480674	NA	0	NA	TRUE	NA	NA	NA	B	coding	357	1074	49	1122	15.0	0	True	NA	NA
PB.9059.18	chr4	-	2330	15	incomplete-splice_match	DDX60L	ENST00000505890.5	4568	30	-4	33498	0	-7815	3prime_fragment	FALSE	canonical	1	33876	junction_14	42697.4866995012	NA	1	NA	TRUE	NA	NA	NA	C	coding	701	2103	226	2328	30.0	-5	True	NA	NA
PB.9059.19	chr4	-	2316	15	novel_in_catalog	DDX60L	novel	6754	38	NA	NA	0	-7815	combination_of_known_junctions	FALSE	canonical	1	15314	junction_14	45508.33728106021	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2103	212	2314	30.0	-5	True	NA	NA
PB.589.12	chr1	+	3156	9	novel_in_catalog	SARS	novel	1852	11	NA	NA	-7	-6	intron_retention	FALSE	canonical	1	1388592	junction_5	394788.1200644214	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	1341	2021	10.0	43	True	NA	NA
PB.5870.1	chr19	+	2815	4	full-splice_match	ZNF93	ENST00000343769.5	2648	4	-169	2	-21	-2	multi-exon	FALSE	canonical	1	44871	junction_1	11087.238640286709	NA	3	NA	TRUE	NA	NA	NA	C	coding	620	1863	198	2060	35.0	0	True	NA	NA
PB.11419.1	chr8	+	2690	4	full-splice_match	C8orf33	ENST00000530455.5	2676	4	-14	0	-12	0	multi-exon	FALSE	canonical	1	737438	junction_2	1316.5169535136602	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	2071	2433	0.0	-14	True	NA	NA
PB.11419.2	chr8	+	2579	5	full-splice_match	C8orf33	ENST00000331434.6	2677	5	97	1	7	-1	multi-exon	FALSE	canonical	1	180351	junction_1	241917.50130610124	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	18	707	5.0	8	True	NA	NA
PB.12278.4	chrX	-	2469	7	novel_not_in_catalog	MOSPD1	novel	2364	6	NA	NA	10	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	79175.38535569134	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	300	941	35.0	-1	True	AATAAA	-17
PB.12278.5	chrX	-	2320	6	novel_not_in_catalog	MOSPD1	novel	2364	6	NA	NA	-17	-7	any annotated donor/acceptor	FALSE	canonical	1	178	junction_1	88029.20890568085	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	205	741	35.0	0	True	AATAAA	-17
PB.12278.6	chrX	-	2106	4	novel_in_catalog	MOSPD1	novel	2364	6	NA	NA	13	-7	combination_of_known_junctions	FALSE	canonical	1	14810	junction_2	48120.648183036305	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	2	True	AATAAA	-17
PB.12278.7	chrX	-	2166	6	full-splice_match	MOSPD1	ENST00000370783.7	2364	6	48	150	0	-150	multi-exon	FALSE	canonical	1	87296	junction_2	45483.157143716395	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	140	781	35.0	-1	True	CATAAA	-22
PB.12278.1	chrX	-	2194	5	full-splice_match	MOSPD1	ENST00000370779.8	773	5	-28	-1393	12	4	multi-exon	FALSE	canonical	1	66342	junction_1	53211.888168904516	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	176	655	35.0	1	True	AATAAA	-28
PB.12278.2	chrX	-	2312	6	novel_not_in_catalog	MOSPD1	novel	2364	6	NA	NA	11	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	87512.51052826675	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	299	778	40.0	0	True	AATAAA	-23
PB.12278.3	chrX	-	2350	6	full-splice_match	MOSPD1	ENST00000370783.7	2364	6	12	2	12	-2	multi-exon	FALSE	canonical	1	87296	junction_2	45483.157143716395	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	176	817	35.0	1	True	AATAAA	-22
PB.5870.2	chr19	+	3209	4	full-splice_match	ZNF93	ENST00000343769.5	2648	4	-105	-456	10	456	multi-exon	FALSE	canonical	1	44871	junction_1	11087.238640286709	NA	1	NA	TRUE	NA	NA	NA	C	coding	620	1863	134	1996	90.0	10	True	NA	NA
PB.12278.8	chrX	-	2057	5	full-splice_match	MOSPD1	ENST00000370779.8	773	5	-45	-1239	-5	-150	multi-exon	FALSE	canonical	1	66342	junction_1	53211.888168904516	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	193	672	35.0	44	False	CATAAA	-22
PB.8418.1	chr3	+	1862	16	full-splice_match	PCCB	ENST00000466072.5	1844	16	-15	-3	-15	2	multi-exon	FALSE	canonical	1	9956	junction_10	244334.0310314186	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	37	1716	25.0	-12	True	ATTAAA	-17
PB.8418.2	chr3	+	2041	14	novel_in_catalog	PCCB	novel	1833	15	NA	NA	-13	0	intron_retention	FALSE	canonical	1	522219	junction_8	83610.0591827585	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	35	1375	15.0	-10	True	ATTAAA	-14
PB.8418.3	chr3	+	1698	14	full-splice_match	PCCB	ENST00000484181.5	1683	14	-13	-2	-13	1	multi-exon	FALSE	canonical	1	8866	junction_11	191811.70367189485	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	35	1252	25.0	-10	True	ATTAAA	-16
PB.8418.4	chr3	+	1650	15	full-splice_match	PCCB	ENST00000251654.8	1833	15	38	145	-11	-145	multi-exon	FALSE	canonical	1	522219	junction_8	90690.0037685285	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1617	33	1649	70.0	-8	True	AAAACA	-18
PB.8418.5	chr3	+	2659	16	novel_not_in_catalog	PCCB	novel	1833	15	NA	NA	-3	2418	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	191026.31161184752	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	25	1644	20.0	0	True	NA	NA
PB.10827.10	chr7	+	2091	10	novel_not_in_catalog	AC010655.4	novel	707	5	NA	NA	20921	11238	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	70498.23212440626	NA	1	NA	TRUE	NA	NA	NA	B	coding	378	1137	6	1142	100.0	-29	True	NA	NA
PB.8418.7	chr3	+	1933	16	novel_not_in_catalog	PCCB	novel	1833	15	NA	NA	-1	3569	any annotated donor/acceptor	FALSE	canonical	1	217	junction_15	190978.21309516492	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	23	1651	30.0	2	True	AATACA	-18
PB.8418.8	chr3	+	2830	14	incomplete-splice_match	PCCB	ENST00000251654.8	1833	15	50	0	1	0	intron_retention	FALSE	canonical	1	522219	junction_8	91849.9692325679	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	21	1535	15.0	4	True	ATTAAA	-14
PB.8418.9	chr3	+	2123	15	full-splice_match	PCCB	ENST00000251654.8	1833	15	51	-341	-1	340	multi-exon	FALSE	canonical	1	522219	junction_8	90690.0037685285	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	20	1639	25.0	5	True	NA	NA
PB.8843.2	chr4	+	2918	12	novel_in_catalog	ANXA3	novel	1657	13	NA	NA	-40	-12	intron_retention	FALSE	canonical	1	473124	junction_1	89648.89075629832	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	192	1028	30.0	0	True	AATAAA	-13
PB.7275.4	chr20	-	2154	10	full-splice_match	DSN1	ENST00000448110.6	2129	10	-26	1	11	-1	multi-exon	FALSE	canonical	1	24204	junction_9	106199.5927456096	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	140	1162	25.0	-24	True	ATTAAA	-18
PB.7275.5	chr20	-	1972	11	full-splice_match	DSN1	ENST00000373740.7	1922	11	-51	1	-1	-1	multi-exon	FALSE	canonical	1	2869	junction_9	111040.6749536403	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	126	980	25.0	-9	True	ATTAAA	-18
PB.7275.6	chr20	-	2185	10	full-splice_match	DSN1	ENST00000480153.5	2447	10	2	260	1	-260	multi-exon	FALSE	canonical	1	135298	junction_9	82963.45265339938	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	430	1452	80.0	-34	True	NA	NA
PB.7275.7	chr20	-	2216	11	full-splice_match	DSN1	ENST00000426836.5	2441	11	-43	268	3	-264	multi-exon	FALSE	canonical	1	22141	junction_10	106514.12333211968	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	417	1487	70.0	-32	True	NA	NA
PB.5171.1	chr17	+	2323	4	full-splice_match	TACO1	ENST00000581120.1	2304	4	-19	0	-9	0	multi-exon	FALSE	canonical	1	347818	junction_1	57777.34267763523	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	1590	1961	10.0	-102	False	NA	NA
PB.7275.1	chr20	-	2464	11	full-splice_match	DSN1	ENST00000426836.5	2441	11	-25	2	-6	2	multi-exon	FALSE	canonical	1	22141	junction_10	106514.12333211968	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	399	1469	30.0	-14	True	ATTAAA	-21
PB.7275.2	chr20	-	2283	11	full-splice_match	DSN1	ENST00000373750.8	2233	11	-51	1	-48	-1	multi-exon	FALSE	canonical	1	135298	junction_10	86946.29259974229	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	221	1291	25.0	9789	False	ATTAAA	-18
PB.5171.2	chr17	+	1469	5	full-splice_match	TACO1	ENST00000258975.6	1469	5	0	0	0	0	multi-exon	FALSE	canonical	1	347818	junction_1	51580.34212456815	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	213	1106	5.0	-23	True	NA	NA
PB.6967.1	chr2	-	3815	20	novel_not_in_catalog	NDUFS1	novel	11819	19	NA	NA	18	1682	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	265234.1128849721	NA	1	1	TRUE	NA	NA	NA	C	coding	727	2184	156	2339	20.0	-1	True	NA	NA
PB.5479.25	chr18	-	2330	16	full-splice_match	MBD1	ENST00000591416.5	4905	16	255	2320	7	-116	multi-exon	FALSE	canonical	1	211866	junction_6	110419.86402446899	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	178	1995	35.0	-9	True	ATTAAA	-20
PB.5479.24	chr18	-	2416	16	novel_in_catalog	MBD1	novel	2532	15	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	88188	junction_4	135794.49966507807	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	186	1958	5.0	-17	True	AATAAA	-18
PB.5479.23	chr18	-	2438	16	full-splice_match	MBD1	ENST00000591416.5	4905	16	247	2220	-1	-16	multi-exon	FALSE	canonical	1	211866	junction_6	110419.86402446899	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	186	2003	60.0	-17	True	NA	NA
PB.5479.22	chr18	-	2307	15	full-splice_match	MBD1	ENST00000398493.5	1845	15	-36	-426	-15	-1	multi-exon	FALSE	canonical	1	78830	junction_5	130593.49741617212	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	200	1849	5.0	-31	True	AATAAA	-18
PB.5479.21	chr18	-	2673	14	novel_in_catalog	MBD1	novel	2532	15	NA	NA	-12	-8	intron_retention	FALSE	canonical	1	78830	junction_5	155431.86759534708	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	791	2083	40.0	-28	True	ATTAAA	-14
PB.5479.20	chr18	-	2545	15	novel_in_catalog	MBD1	novel	2532	15	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	1	78830	junction_5	152168.88235090466	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	151	1950	35.0	18	True	ATTAAA	-19
PB.587.2	chr1	-	4854	18	novel_not_in_catalog	WDR47	novel	4134	15	NA	NA	-33882	0	any annotated donor/acceptor	FALSE	canonical	1	568	junction_15	138683.1166760992	NA	3	1	TRUE	NA	NA	NA	C	coding	917	2754	889	3642	25.0	7	True	AATAAA	-16
PB.635.24	chr1	-	3436	21	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-20	any annotated donor/acceptor	FALSE	canonical	1	19607	junction_19	1769945.5930806205	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	203	2599	90.0	-1	True	NA	NA
PB.642.21	chr1	-	3669	9	incomplete-splice_match	IGSF3	ENST00000369486.7	7254	11	51	10130	51	-7319	3prime_fragment	FALSE	canonical	1	62188	junction_8	34354.0243967137	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2952	716	3667	40.0	4	True	AATAAA	-13
PB.642.20	chr1	-	4854	11	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	286	440	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_10	49866.38441966692	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	738	4322	45.0	0	True	AATATA	-22
PB.642.23	chr1	-	3236	6	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	285	10988	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_5	39542.007863030936	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	739	2058	15.0	-1	True	AATAAA	-26
PB.642.22	chr1	-	3298	6	incomplete-splice_match	IGSF3	ENST00000369483.5	7326	12	-31	30876	-31	10989	3prime_fragment	FALSE	canonical	1	26943	junction_1	28067.79923969815	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	800	2119	15.0	-80	False	AATAAA	-27
PB.642.24	chr1	-	4661	5	incomplete-splice_match	IGSF3	ENST00000369486.7	7254	11	-12	30872	-10	10983	3prime_fragment	FALSE	canonical	1	62188	junction_4	18246.902550501552	NA	3	NA	TRUE	NA	NA	NA	C	coding	409	1230	779	2008	30.0	-59	False	AATAAA	-21
PB.5143.1	chr17	+	2733	1	novel_in_catalog	RAD51C	novel	726	5	NA	NA	0	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	0	True	ATTAAA	-16
PB.8909.1	chr4	-	3004	16	novel_in_catalog	CENPE	novel	8612	49	NA	NA	1389	97	intron_retention	FALSE	canonical	1	84376	junction_11	34174.50865777005	NA	2	1	TRUE	NA	NA	NA	B	coding	877	2634	99	2732	50.0	-2565	False	AATAAA	-8
PB.10991.2	chr8	-	3941	14	full-splice_match	DLC1	ENST00000358919.6	4392	14	152	299	-33	67	multi-exon	FALSE	canonical	1	100666	junction_13	38984.30448361245	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	343	3618	25.0	7932	False	AATACA	-36
PB.10991.3	chr8	-	3805	14	full-splice_match	DLC1	ENST00000358919.6	4392	14	183	404	-2	0	multi-exon	FALSE	canonical	1	100666	junction_13	38984.30448361245	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	312	3587	85.0	-8	True	NA	NA
PB.10991.1	chr8	-	6031	14	full-splice_match	DLC1	ENST00000358919.6	4392	14	187	-1826	2	-2	multi-exon	TRUE	canonical	1	100666	junction_13	38984.30448361245	NA	2	NA	TRUE	NA	NA	NA	C	coding	1091	3276	308	3583	25.0	-4	True	NA	NA
PB.654.2	chr1	+	1863	12	full-splice_match	PHGDH	ENST00000641023.1	2096	12	220	13	0	0	multi-exon	FALSE	canonical	1	1109258	junction_7	222410.29169216752	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	89	1690	15.0	-2	True	AATAAA	-13
PB.654.1	chr1	+	1859	12	novel_not_in_catalog	PHGDH	novel	2585	15	NA	NA	-8	0	any annotated donor/acceptor	TRUE	canonical	1	7671	junction_9	498218.66954705707	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	98	1174	15.0	-11	True	AATAAA	-13
PB.6489.49	chr2	-	4373	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	286	3489	15.0	-16	True	AATAAA	-14
PB.10308.3	chr6	+	2903	18	full-splice_match	SYTL3	ENST00000611299.4	2896	18	-12	5	-12	2	multi-exon	FALSE	canonical	1	18644	junction_1	33158.026315224306	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	804	2636	30.0	-52	True	AATAAA	-17
PB.849.19	chr1	-	2794	12	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	-35	-108	intron_retention	FALSE	canonical	1	29318	junction_11	251076.14223735672	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	145	1863	40.0	-18	False	AATAAA	-15
PB.5038.8	chr17	-	1778	12	novel_in_catalog	SLC25A39	novel	1607	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	9552	junction_11	799110.934762497	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	351	1406	0.0	0	True	NA	NA
PB.5860.8	chr19	+	5755	17	novel_not_in_catalog	MAU2	novel	4994	19	NA	NA	149	0	intron_retention	FALSE	non_canonical	0	0	junction_1	102291.95929328265	NA	3	1	TRUE	NA	NA	NA	B	coding	231	696	602	1297	30.0	-15	True	ATTAAA	-20
PB.8747.9	chr4	+	2008	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	95	3142	0	-333	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	190	792	45.0	-6	True	ATTAAA	-23
PB.8747.8	chr4	+	5006	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	235	4	-49	-4	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	5	NA	TRUE	NA	NA	NA	C	coding	200	603	50	652	35.0	110	False	AATAAA	-21
PB.5038.1	chr17	-	2717	11	incomplete-splice_match	SLC25A39	ENST00000225308.12	1607	12	22	1	-18	-1	intron_retention	FALSE	canonical	1	1882598	junction_4	445084.65526050207	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	1287	2342	0.0	1918	False	NA	NA
PB.8747.6	chr4	+	3035	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	92	2118	-3	682	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	6	NA	TRUE	NA	NA	NA	C	coding	200	603	193	795	20.0	-9	True	TATAAA	-21
PB.8747.5	chr4	+	3291	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	92	1862	-3	938	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	193	795	70.0	-9	True	TTTAAA	-7
PB.5038.2	chr17	-	1557	12	full-splice_match	SLC25A39	ENST00000225308.12	1607	12	48	2	0	0	multi-exon	FALSE	canonical	1	969488	junction_11	583965.9085715691	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	128	1183	0.0	0	True	NA	NA
PB.5038.5	chr17	-	2913	10	novel_in_catalog	SLC25A39	novel	1607	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	446222	junction_7	762476.5458937729	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	2013	2540	0.0	2	True	NA	NA
PB.5038.4	chr17	-	2819	9	novel_in_catalog	SLC25A39	novel	1607	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	35593	junction_5	927650.0231116174	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	1918	2445	0.0	5	True	NA	NA
PB.5038.7	chr17	-	1598	12	full-splice_match	SLC25A39	ENST00000377095.9	1565	12	-25	-8	-10	-1	multi-exon	FALSE	canonical	1	446222	junction_8	778394.2243092825	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	146	1225	0.0	-18	True	NA	NA
PB.5038.6	chr17	-	1789	11	novel_in_catalog	SLC25A39	novel	1607	12	NA	NA	17	-1	intron_retention	FALSE	canonical	1	969488	junction_10	610532.067354402	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	889	1416	0.0	1913	False	NA	NA
PB.4722.16	chr17	+	2034	19	novel_not_in_catalog	ACADVL	novel	2227	21	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	920243.0645304506	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	127	1866	10.0	-32	True	AATAAA	-16
PB.4722.17	chr17	+	3288	13	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	648871	junction_1	862298.5565836522	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	380	979	10.0	-30	True	AATAAA	-16
PB.4722.14	chr17	+	2388	18	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-1	0	intron_retention	FALSE	canonical	1	96265	junction_13	1006864.7090628451	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	84	1232	10.0	-36	True	AATAAA	-16
PB.4722.15	chr17	+	2652	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1566022	junction_1	662903.2216247914	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	1672	2484	10.0	-32	True	AATAAA	-16
PB.4722.12	chr17	+	3036	16	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-3	0	intron_retention	FALSE	canonical	1	648871	junction_1	854392.9852967506	NA	2	1	TRUE	NA	NA	NA	C	coding	275	828	86	913	10.0	-38	True	AATAAA	-16
PB.4722.13	chr17	+	3283	15	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-1	1	intron_retention	FALSE	canonical	1	224226	junction_11	1027085.386767034	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	652	1251	5.0	-36	True	AATAAA	-18
PB.4722.10	chr17	+	2176	19	novel_not_in_catalog	ACADVL	novel	2227	21	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	920243.0645304506	NA	6	1	TRUE	NA	NA	NA	C	coding	579	1740	269	2008	10.0	-42	True	AATAAA	-16
PB.4722.11	chr17	+	3515	15	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-3	0	intron_retention	FALSE	canonical	1	224226	junction_11	1085946.9311974237	NA	4	NA	TRUE	NA	NA	NA	C	coding	164	495	2539	3033	10.0	-38	True	AATAAA	-16
PB.11690.2	chr9	+	1842	4	novel_in_catalog	MSANTD3	novel	1362	3	NA	NA	59	21	combination_of_known_junctions	FALSE	canonical	1	3762	junction_1	137174.05454952316	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	249	1076	30.0	-18	True	NA	NA
PB.5860.4	chr19	+	4753	17	novel_in_catalog	MAU2	novel	4994	19	NA	NA	148	-6	combination_of_known_junctions	FALSE	canonical	1	10847	junction_1	110288.51985410528	NA	0	NA	TRUE	NA	NA	NA	B	coding	584	1755	32	1786	10.0	-16	True	AGTAAA	-13
PB.4722.18	chr17	+	2428	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	2	0	intron_retention	FALSE	canonical	1	11924	junction_6	1060297.0797968735	NA	2	1	TRUE	NA	NA	NA	C	coding	270	813	1448	2260	10.0	-28	True	AATAAA	-16
PB.4722.19	chr17	+	2977	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	4	0	intron_retention	FALSE	canonical	1	648871	junction_1	831249.4760237071	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	2027	2809	10.0	-26	True	AATAAA	-16
PB.11357.24	chr8	-	4706	32	novel_in_catalog	PTK2	novel	4955	32	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	6271	junction_30	138616.4214760285	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	489	3647	30.0	-38	True	ATTAAA	-13
PB.5860.5	chr19	+	3834	18	novel_not_in_catalog	MAU2	novel	4994	19	NA	NA	-146	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	100165.8226280863	NA	4	1	TRUE	NA	NA	NA	B	coding	421	1266	592	1857	25.0	-5	True	ATTAAA	-19
PB.11261.1	chr8	+	3367	17	novel_not_in_catalog	POP1	novel	585	5	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	1962	junction_1	43020.43066158908	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3075	150	3224	35.0	-15	True	AATAAA	-22
PB.5860.2	chr19	+	3782	17	novel_in_catalog	MAU2	novel	4994	19	NA	NA	140	7	combination_of_known_junctions	FALSE	canonical	1	10847	junction_1	100008.60884129473	NA	0	NA	TRUE	NA	NA	NA	B	coding	585	1758	40	1797	25.0	-24	True	ATTAAA	-27
PB.7847.3	chr22	-	3181	14	novel_not_in_catalog	TTLL12	novel	3385	14	NA	NA	-544	0	any annotated donor/acceptor	FALSE	canonical	1	536	junction_13	194846.8173698806	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	69	1796	5.0	-544	False	AATAAA	-15
PB.11357.26	chr8	-	2131	3	full-splice_match	PTK2	ENST00000519881.5	863	3	19	-1287	1	1287	multi-exon	FALSE	canonical	1	92123	junction_2	131197.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	174	539	30.0	-37	True	AATAAA	-15
PB.5860.3	chr19	+	4793	19	novel_not_in_catalog	MAU2	novel	4994	19	NA	NA	148	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	116444.46005009436	NA	3	1	TRUE	NA	NA	NA	B	coding	421	1266	603	1868	10.0	-16	True	AGTAAA	-13
PB.1179.2	chr1	+	1871	8	novel_in_catalog	GUK1	novel	937	8	NA	NA	-1	0	intron_retention	FALSE	canonical	1	446523	junction_1	1490839.5021764326	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	1097	1618	35.0	2	True	AATAAA	-24
PB.10287.2	chr6	-	9816	55	novel_not_in_catalog	SYNE1	novel	27748	146	NA	NA	-9	-6	any annotated donor/acceptor	TRUE	canonical	1	20669	junction_52	63117.65383012271	NA	4	NA	TRUE	NA	NA	NA	B	coding	3000	9003	71	9073	25.0	-42	True	NA	NA
PB.11504.1	chr9	-	1855	6	full-splice_match	AQP3	ENST00000297991.5	1871	6	15	1	15	-1	multi-exon	FALSE	canonical	1	374246	junction_5	273732.4443346824	NA	1	NA	TRUE	NA	NA	NA	A	coding	292	879	89	967	25.0	183	False	AATAAA	-24
PB.10287.3	chr6	-	3965	25	novel_not_in_catalog	SYNE1	novel	27748	146	NA	NA	-17	29772	any annotated donor/acceptor	FALSE	canonical	1	20922	junction_18	44537.721735637104	NA	29	3	TRUE	NA	NA	NA	B	coding	1295	3885	79	3963	70.0	-50	True	ATTAAA	-3
PB.11357.21	chr8	-	3949	30	novel_in_catalog	PTK2	novel	4955	32	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	294	junction_28	140074.94084300456	NA	5	1	TRUE	NA	NA	NA	C	coding	897	2694	195	2888	30.0	6	True	ATTAAA	-15
PB.1112.2	chr1	+	3060	3	full-splice_match	ATF3	ENST00000465155.5	1626	3	90	-1524	90	-1	multi-exon	FALSE	canonical	1	286086	junction_1	156961.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	176	538	20.0	-1	True	AATAAA	-20
PB.11357.22	chr8	-	5119	34	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	4929	junction_31	167227.28911885287	NA	1	1	TRUE	NA	NA	NA	C	coding	1096	3291	768	4058	30.0	-41	True	ATTAAA	-15
PB.10745.3	chr7	-	3789	11	novel_in_catalog	CLDN15	novel	1370	5	NA	NA	-6261	-2	no_combination_of_known_junctions	FALSE	canonical	1	17351	junction_5	1261060.668272312	NA	0	NA	TRUE	NA	NA	NA	B	coding	152	459	78	536	20.0	-1	True	AATAAA	-17
PB.10745.2	chr7	-	3803	9	novel_in_catalog	CLDN15	novel	1370	5	NA	NA	-13482	-1	no_combination_of_known_junctions	FALSE	canonical	1	45653	junction_5	1194820.447692011	NA	2	NA	TRUE	NA	NA	NA	B	coding	228	687	2801	3487	25.0	1	True	AATAAA	-18
PB.10745.1	chr7	-	3673	10	novel_in_catalog	CLDN15	novel	1370	5	NA	NA	-6283	0	no_combination_of_known_junctions	FALSE	canonical	1	45653	junction_5	1267800.78004099	NA	0	NA	TRUE	NA	NA	NA	B	coding	152	459	100	558	30.0	7200	False	AATAAA	-19
PB.10745.6	chr7	-	1959	1	novel_in_catalog	FIS1	novel	915	4	NA	NA	-2	-10603	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	10	True	NA	NA
PB.10745.5	chr7	-	727	5	full-splice_match	FIS1	ENST00000223136.4	734	5	5	2	-5	-2	multi-exon	FALSE	canonical	1	1733043	junction_4	481781.6993900739	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	77	535	15.0	0	True	AATAAA	-19
PB.10745.4	chr7	-	3640	6	novel_in_catalog	CLDN15	novel	1370	5	NA	NA	-6285	-35	intron_retention	FALSE	canonical	1	112792	junction_1	1071395.3820443694	NA	1	NA	TRUE	NA	NA	NA	B	coding	152	459	102	560	85.0	4	True	NA	NA
PB.7908.4	chr3	+	2913	7	full-splice_match	ARL8B	ENST00000611208.4	2981	7	68	0	17	0	multi-exon	FALSE	canonical	1	263019	junction_1	75102.48029563042	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	154	714	30.0	21	True	AATAAA	-17
PB.3918.10	chr15	+	2046	16	novel_not_in_catalog	SNX1	novel	1869	14	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	2387	junction_2	322749.50852603256	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	573	1667	40.0	-2	True	AATAAA	-8
PB.3918.11	chr15	+	2689	1	novel_in_catalog	SNX1	novel	1869	14	NA	NA	1	-27410	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.7908.3	chr3	+	2751	7	full-splice_match	ARL8B	ENST00000611208.4	2981	7	63	167	12	-166	multi-exon	FALSE	canonical	1	263019	junction_1	75102.48029563042	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	159	719	25.0	16	True	AATAAA	-17
PB.10152.4	chr6	-	5558	7	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17271	-10254	any annotated donor/acceptor	FALSE	canonical	1	12899	junction_6	36747.53181016228	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	214	2307	55.0	-23	True	ATTAAA	-16
PB.7908.1	chr3	+	1600	7	full-splice_match	ARL8B	ENST00000611208.4	2981	7	47	1334	0	-68	multi-exon	FALSE	canonical	1	263019	junction_1	75102.48029563042	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	175	735	25.0	0	True	AATAAA	-17
PB.11666.9	chr9	+	4048	18	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-51	-169	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	17999.23324222336	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3690	357	4046	45.0	0	True	AAAAAG	-44
PB.6856.1	chr2	+	3930	2	full-splice_match	HOXD4	ENST00000306324.3	1464	2	315	-2781	315	2781	multi-exon	FALSE	canonical	1	21274	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	253	762	104	865	15.0	-5770	False	ATTAAA	-15
PB.12385.20	chrY	+	2457	17	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-15	9	combination_of_known_junctions	FALSE	canonical	1	22408	junction_1	88657.93872131531	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	58	2031	40.0	2	True	AATAAA	-36
PB.12385.21	chrY	+	4549	16	novel_not_in_catalog	DDX3Y	novel	2709	18	NA	NA	-11	0	intron_retention	FALSE	canonical	1	321	junction_1	92063.99078747106	NA	5	1	TRUE	NA	NA	NA	C	coding	476	1431	763	2193	10.0	6	True	AATAAA	-14
PB.6488.16	chr2	-	4865	6	novel_not_in_catalog	USP34	novel	11357	80	NA	NA	-3	-41124	any annotated donor/acceptor	FALSE	canonical	1	97	junction_1	88678.94405866592	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	81	917	40.0	-38	True	AATAAA	-21
PB.6710.3	chr2	+	2652	6	full-splice_match	INSIG2	ENST00000245787.8	2590	6	28	-90	28	90	multi-exon	FALSE	canonical	1	60805	junction_1	124467.96279107327	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	179	856	65.0	31	True	AATGAA	-26
PB.6488.13	chr2	-	7930	62	incomplete-splice_match	USP34	ENST00000398571.6	11357	80	17	39329	17	-4	3prime_fragment	FALSE	canonical	1	146864	junction_61	74309.56648648837	NA	4	1	TRUE	NA	NA	NA	C	coding	2532	7599	61	7659	35.0	-18	True	AATATA	-17
PB.6488.12	chr2	-	2764	20	incomplete-splice_match	USP34	ENST00000398571.6	11357	80	241825	1466	-5283	348	internal_fragment	FALSE	canonical	1	302153	junction_14	75612.80260020898	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2733	32	2764	70.0	-8795	False	NA	NA
PB.10152.9	chr6	-	2580	7	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17273	-13252	any annotated donor/acceptor	FALSE	canonical	1	6338	junction_1	42190.45635929476	NA	5	1	TRUE	NA	NA	NA	C	coding	457	1374	173	1546	25.0	-25	True	NA	NA
PB.6710.2	chr2	+	3349	2	incomplete-splice_match	INSIG2	ENST00000245787.8	2590	6	-5	10334	-5	-7448	3prime_fragment	FALSE	canonical	1	60805	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-2	True	NA	NA
PB.10152.8	chr6	-	3524	7	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17178	-12195	any annotated donor/acceptor	FALSE	canonical	1	12899	junction_6	36747.53181016228	NA	4	1	TRUE	NA	NA	NA	C	coding	697	2094	121	2214	35.0	70	False	ATTAAA	-22
PB.1957.14	chr11	+	3854	4	novel_not_in_catalog	FAM111A	novel	6189	5	NA	NA	-23	0	any annotated donor/acceptor	FALSE	canonical	1	11149	junction_1	113987.11735786442	NA	4	NA	TRUE	NA	NA	NA	C	coding	611	1836	487	2322	25.0	178	False	NA	NA
PB.1957.10	chr11	+	3671	4	full-splice_match	FAM111A	ENST00000527629.5	867	4	14	-2818	-6	0	multi-exon	FALSE	canonical	1	11333	junction_2	115711.82561672578	NA	7	NA	TRUE	NA	NA	NA	C	coding	611	1836	304	2139	25.0	-69	True	NA	NA
PB.1957.13	chr11	+	3800	3	novel_not_in_catalog	FAM111A	novel	6189	5	NA	NA	-40	0	any annotated donor/acceptor	FALSE	canonical	1	355	junction_1	139154.0	NA	5	1	TRUE	NA	NA	NA	C	coding	611	1836	435	2270	30.0	161	False	NA	NA
PB.1957.12	chr11	+	3617	3	novel_not_in_catalog	FAM111A	novel	6189	5	NA	NA	-29	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	139331.5	NA	6	1	TRUE	NA	NA	NA	C	coding	611	1836	250	2085	25.0	-29	True	NA	NA
PB.9056.1	chr4	-	2643	1	antisense	novelGene_MSMO1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.5159.5	chr17	-	4169	13	novel_not_in_catalog	APPBP2	novel	6478	13	NA	NA	-22	2281	intron_retention	TRUE	canonical	1	317	junction_10	108786.64340796725	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	311	2053	20.0	0	True	AATAAA	-18
PB.5159.4	chr17	-	4166	13	full-splice_match	APPBP2	ENST00000083182.7	6478	13	-12	2324	-12	2273	multi-exon	FALSE	canonical	1	167699	junction_11	64845.62831849834	NA	58	2	TRUE	NA	NA	NA	C	coding	585	1758	301	2058	30.0	10	True	AATAAA	-10
PB.5159.3	chr17	-	4631	13	full-splice_match	APPBP2	ENST00000083182.7	6478	13	6	1841	6	-1841	multi-exon	FALSE	canonical	1	167699	junction_11	64845.62831849834	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	283	2040	65.0	28	True	NA	NA
PB.5159.1	chr17	-	6493	13	full-splice_match	APPBP2	ENST00000083182.7	6478	13	-21	6	-21	-6	multi-exon	TRUE	canonical	1	167699	junction_11	64845.62831849834	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	310	2067	25.0	1	True	AATAAA	-19
PB.479.12	chr1	+	1957	12	full-splice_match	ACADM	ENST00000370841.8	2619	12	372	290	14	-102	multi-exon	FALSE	canonical	1	750250	junction_1	114069.89592655117	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	66	1331	20.0	-32	True	AATAAA	-29
PB.841.31	chr1	+	2692	11	full-splice_match	IFI16	ENST00000359709.7	2609	11	-84	1	-1	-1	multi-exon	FALSE	canonical	1	995	junction_3	379439.9692167919	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	257	2446	30.0	-1	True	AATAAA	-20
PB.5159.9	chr17	-	2439	14	novel_in_catalog	APPBP2	novel	6478	13	NA	NA	-22	507	intron_retention	FALSE	canonical	1	3484	junction_12	125804.50087775315	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	598	2097	35.0	0	True	AATAAA	-16
PB.5159.8	chr17	-	2880	13	full-splice_match	APPBP2	ENST00000083182.7	6478	13	-6	3604	-6	993	multi-exon	FALSE	canonical	1	167699	junction_11	64845.62831849834	NA	16	NA	TRUE	NA	NA	NA	C	coding	585	1758	295	2052	65.0	16	True	NA	NA
PB.6710.9	chr2	+	3143	5	novel_not_in_catalog	INSIG2	novel	574	5	NA	NA	37	-1	intron_retention	FALSE	canonical	0	0	junction_1	159325.98860100476	NA	5	1	TRUE	NA	NA	NA	C	coding	150	453	17	469	20.0	-8022	False	AATAAA	-16
PB.6892.2	chr2	-	3009	15	full-splice_match	CALCRL	ENST00000392370.7	5155	15	169	1977	-38	821	multi-exon	FALSE	canonical	1	36466	junction_14	25907.23778036098	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	546	1931	35.0	-19	True	AATAAA	-17
PB.9544.6	chr5	+	2560	16	incomplete-splice_match	AC091959.3	ENST00000506502.2	3311	20	36	69813	36	-69813	3prime_fragment	FALSE	canonical	1	62222	junction_8	77133.89385362457	NA	0	NA	TRUE	NA	NA	NA	B	coding	793	2379	181	2559	80.0	17	True	NA	NA
PB.4878.6	chr17	+	7074	21	full-splice_match	CPD	ENST00000225719.8	9394	21	28	2292	28	1274	multi-exon	FALSE	canonical	1	222507	junction_1	77887.55321898356	NA	0	NA	TRUE	NA	NA	NA	C	coding	1380	4143	49	4191	20.0	-3	True	AATAAA	-23
PB.4878.7	chr17	+	5389	21	full-splice_match	CPD	ENST00000225719.8	9394	21	34	3971	34	-405	multi-exon	FALSE	canonical	1	222507	junction_1	77887.55321898356	NA	0	NA	TRUE	NA	NA	NA	C	coding	1380	4143	43	4185	65.0	3	True	NA	NA
PB.4878.4	chr17	+	6738	21	full-splice_match	CPD	ENST00000225719.8	9394	21	16	2640	16	926	multi-exon	FALSE	canonical	1	222507	junction_1	77887.55321898356	NA	0	NA	TRUE	NA	NA	NA	C	coding	1380	4143	61	4203	20.0	-15	True	AATAAA	-27
PB.4878.5	chr17	+	7931	21	full-splice_match	CPD	ENST00000225719.8	9394	21	152	1311	152	-1311	multi-exon	FALSE	canonical	1	222507	junction_1	77887.55321898356	NA	1	NA	TRUE	NA	NA	NA	C	coding	1243	3732	336	4067	5.0	121	False	TATAAA	-13
PB.4878.2	chr17	+	5822	21	full-splice_match	CPD	ENST00000225719.8	9394	21	-2	3574	-2	-8	multi-exon	FALSE	canonical	1	222507	junction_1	77887.55321898356	NA	0	NA	TRUE	NA	NA	NA	C	coding	1380	4143	79	4221	40.0	-33	False	TATAAA	-18
PB.4878.3	chr17	+	8696	21	full-splice_match	CPD	ENST00000225719.8	9394	21	12	686	12	-686	multi-exon	FALSE	canonical	1	222507	junction_1	77887.55321898356	NA	2	NA	TRUE	NA	NA	NA	C	coding	1380	4143	65	4207	25.0	-19	True	NA	NA
PB.4878.1	chr17	+	4361	21	full-splice_match	CPD	ENST00000225719.8	9394	21	-5	5038	-5	4	multi-exon	TRUE	canonical	1	222507	junction_1	77887.55321898356	NA	0	NA	TRUE	NA	NA	NA	C	coding	1380	4143	82	4224	20.0	-36	False	ATTAAA	-18
PB.4286.13	chr16	+	5206	13	novel_in_catalog	CCP110	novel	5549	15	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	8780	junction_12	62000.77655494862	NA	1	NA	TRUE	NA	NA	NA	C	coding	971	2916	162	3077	45.0	1	True	AATAAA	-12
PB.4286.12	chr16	+	4626	16	novel_not_in_catalog	CCP110	novel	5549	15	NA	NA	1	-874	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	61880.93988749686	NA	42	4	TRUE	NA	NA	NA	C	coding	1012	3039	310	3348	100.0	-2	True	NA	NA
PB.4286.11	chr16	+	4549	15	full-splice_match	CCP110	ENST00000396212.6	5549	15	118	882	-10	-874	multi-exon	FALSE	canonical	1	21387	junction_1	57505.70888877921	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	319	3294	100.0	-13	True	NA	NA
PB.4286.10	chr16	+	4123	15	full-splice_match	CCP110	ENST00000381396.9	5446	15	71	1252	-11	534	multi-exon	FALSE	canonical	1	46931	junction_1	49269.73894050288	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	177	3215	40.0	-14	True	AATAAA	-34
PB.4286.15	chr16	+	4238	16	novel_in_catalog	CCP110	novel	5549	15	NA	NA	-5	534	combination_of_known_junctions	FALSE	canonical	1	21387	junction_1	58675.94827388816	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	292	3330	40.0	14	True	AATAAA	-34
PB.4286.14	chr16	+	4015	14	novel_in_catalog	CCP110	novel	5549	15	NA	NA	8	534	combination_of_known_junctions	FALSE	canonical	1	46931	junction_1	45658.59055485201	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	155	3130	40.0	8	True	AATAAA	-34
PB.979.3	chr1	+	4156	27	novel_in_catalog	DHX9	novel	4240	28	NA	NA	-53	0	intron_retention	TRUE	canonical	1	2484	junction_1	307957.4643625591	NA	1	NA	TRUE	NA	NA	NA	C	coding	1223	3672	172	3843	20.0	0	True	AATAAA	-12
PB.979.2	chr1	+	1964	16	incomplete-splice_match	DHX9	ENST00000367549.3	4240	28	-65	12823	-65	-1821	3prime_fragment	FALSE	canonical	1	423798	junction_5	250225.58695967836	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1788	176	1963	25.0	-414	False	AAAAAG	-14
PB.979.1	chr1	+	4148	28	full-splice_match	DHX9	ENST00000367549.3	4240	28	-22	114	-22	-110	multi-exon	FALSE	canonical	1	212284	junction_25	280979.51201768825	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	133	3945	45.0	0	True	AATATA	-11
PB.979.7	chr1	+	3952	26	novel_in_catalog	DHX9	novel	4240	28	NA	NA	11	1	intron_retention	FALSE	canonical	1	4955	junction_1	313592.52665307955	NA	1	1	TRUE	NA	NA	NA	C	coding	1162	3489	150	3638	15.0	-338	False	AATAAA	-13
PB.8397.21	chr3	+	3702	28	full-splice_match	ATP2C1	ENST00000533801.6	3690	28	-16	4	8	-4	multi-exon	FALSE	canonical	1	24099	junction_27	268204.639376428	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	520	3186	30.0	16	True	ATTAAA	-27
PB.979.5	chr1	+	4416	29	novel_in_catalog	DHX9	novel	4240	28	NA	NA	-43	0	intron_retention	FALSE	canonical	1	92136	junction_6	318212.8095832426	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	933	4103	20.0	-392	False	AATAAA	-12
PB.979.4	chr1	+	4490	28	full-splice_match	DHX9	ENST00000367549.3	4240	28	-21	-229	-21	229	multi-exon	FALSE	canonical	1	212284	junction_25	280979.51201768825	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	132	3944	20.0	1	True	AATAAA	-19
PB.11625.25	chr9	-	2763	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-10	17	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	790309.6513899389	NA	4	1	TRUE	NA	NA	NA	B	coding	434	1305	232	1536	20.0	-28	True	AATAAA	-18
PB.10644.3	chr7	-	3706	21	novel_not_in_catalog	KIAA1324L	novel	6841	22	NA	NA	19284	-5	any annotated donor/acceptor	FALSE	canonical	1	2734	junction_20	26191.671151102597	NA	1	NA	TRUE	NA	NA	NA	B	coding	963	2892	365	3256	30.0	NA	False	ATTAAA	-9
PB.10644.2	chr7	-	3293	21	novel_not_in_catalog	KIAA1324L	novel	6841	22	NA	NA	19280	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	32832.92082346619	NA	0	NA	TRUE	NA	NA	NA	B	coding	862	2589	250	2838	25.0	NA	False	ATTAAA	-14
PB.10644.1	chr7	-	3493	22	novel_not_in_catalog	KIAA1324L	novel	6841	22	NA	NA	19276	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	28033.232778500686	NA	5	1	TRUE	NA	NA	NA	B	coding	915	2748	291	3038	25.0	NA	False	ATTAAA	-14
PB.8397.26	chr3	+	3324	29	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	-8	-296	combination_of_known_junctions	FALSE	canonical	1	56424	junction_1	255509.35765110562	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	349	3198	40.0	-35	True	AATAAA	-26
PB.8397.25	chr3	+	3405	30	novel_not_in_catalog	ATP2C1	novel	4888	27	NA	NA	-5	-297	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	290723.5628670545	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	461	3280	40.0	27	True	AATAAA	-25
PB.4474.8	chr16	-	3766	13	full-splice_match	DYNC1LI2	ENST00000258198.6	4515	13	190	559	-7	-559	multi-exon	FALSE	canonical	1	465148	junction_2	115671.98883297713	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	18	1496	35.0	-6	True	AATAAA	-21
PB.4474.9	chr16	-	2379	13	full-splice_match	DYNC1LI2	ENST00000258198.6	4515	13	196	1940	-1	645	multi-exon	FALSE	canonical	1	465148	junction_2	115671.98883297713	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	12	1490	30.0	0	True	ATTAAA	-16
PB.4943.1	chr17	+	3752	7	full-splice_match	LASP1	ENST00000318008.10	4109	7	354	3	70	-2	multi-exon	FALSE	canonical	1	997146	junction_6	274562.89958870184	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	86	763	5.0	-3713	False	AATAAA	-19
PB.4474.7	chr16	-	3882	13	full-splice_match	DYNC1LI2	ENST00000258198.6	4515	13	177	456	-20	-456	multi-exon	FALSE	canonical	1	465148	junction_2	115671.98883297713	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	31	1509	80.0	-19	True	NA	NA
PB.4943.3	chr17	+	3650	8	novel_not_in_catalog	LASP1	novel	4023	6	NA	NA	-20	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	563138.5735860496	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	180	965	5.0	-3915	False	AATAAA	-19
PB.4943.2	chr17	+	3801	8	novel_not_in_catalog	LASP1	novel	4023	6	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	563138.5735860496	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	134	919	5.0	-1	True	AATAAA	-19
PB.4474.2	chr16	-	4294	13	novel_in_catalog	DYNC1LI2	novel	4515	13	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	1563	junction_7	202681.84755401686	NA	3	NA	TRUE	NA	NA	NA	C	coding	483	1452	16	1467	10.0	-4	True	AATAAA	-21
PB.4943.4	chr17	+	3611	8	novel_not_in_catalog	LASP1	novel	4023	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	563138.5735860496	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	160	945	5.0	-3895	False	AATAAA	-20
PB.4943.7	chr17	+	3421	4	novel_not_in_catalog	LASP1	novel	4023	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	555655.3557703032	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	657	1253	5.0	3	True	AATAAA	-21
PB.4943.6	chr17	+	2318	8	novel_not_in_catalog	LASP1	novel	4023	6	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	563138.5735860496	NA	8	NA	TRUE	NA	NA	NA	C	coding	261	786	132	917	5.0	1	True	AATAAA	-19
PB.8800.2	chr4	-	3314	3	novel_not_in_catalog	AC093730.1	novel	448	3	NA	NA	1619	5204	any annotated donor/acceptor	FALSE	canonical	1	1078	junction_1	193.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-3	True	AATAAA	-16
PB.9024.2	chr4	-	5273	20	full-splice_match	SH3D19	ENST00000604030.6	5228	20	-39	-6	-39	0	multi-exon	FALSE	canonical	1	90642	junction_19	49535.0741460406	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	320	3463	25.0	11	True	AATAAA	-22
PB.9024.3	chr4	-	5134	19	novel_in_catalog	SH3D19	novel	503	2	NA	NA	59	0	no_combination_of_known_junctions	TRUE	canonical	1	7325	junction_17	66930.68565833197	NA	2	NA	TRUE	NA	NA	NA	C	coding	767	2304	1021	3324	25.0	-17	True	AATAAA	-22
PB.9024.1	chr4	-	5335	21	novel_in_catalog	SH3D19	novel	503	2	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	1	79325	junction_10	59662.89972210536	NA	2	NA	TRUE	NA	NA	NA	C	coding	1070	3213	312	3524	25.0	19	True	AATAAA	-23
PB.9024.6	chr4	-	3582	20	full-splice_match	SH3D19	ENST00000604030.6	5228	20	-22	1668	-22	-135	multi-exon	FALSE	canonical	1	90642	junction_19	49535.0741460406	NA	3	NA	TRUE	NA	NA	NA	C	coding	1047	3144	303	3446	50.0	28	False	AAAAAG	-39
PB.8397.29	chr3	+	3612	29	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	56424	junction_1	263845.8688048023	NA	2	NA	TRUE	NA	NA	NA	C	coding	939	2820	331	3150	25.0	-17	True	ATTAAA	-31
PB.9024.4	chr4	-	4456	20	full-splice_match	SH3D19	ENST00000604030.6	5228	20	-22	794	-22	739	multi-exon	FALSE	canonical	1	90642	junction_19	49535.0741460406	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	303	3446	20.0	28	False	AATATA	-31
PB.9024.5	chr4	-	4154	20	full-splice_match	SH3D19	ENST00000604030.6	5228	20	-17	1091	-17	442	multi-exon	FALSE	canonical	1	90642	junction_19	49535.0741460406	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	298	3441	20.0	33	False	AATACA	-16
PB.1359.20	chr10	-	5643	26	full-splice_match	KIF5B	ENST00000302418.4	5877	26	9	225	9	-225	multi-exon	FALSE	canonical	1	730493	junction_25	239554.24006755216	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	450	3341	45.0	2	True	ATTAAA	-16
PB.8397.28	chr3	+	3619	27	full-splice_match	ATP2C1	ENST00000428331.6	4795	27	15	1161	15	647	multi-exon	FALSE	canonical	1	304847	junction_1	201649.93089133644	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	221	2980	30.0	-36	True	AGTAAA	-12
PB.1359.25	chr10	-	3740	26	full-splice_match	KIF5B	ENST00000302418.4	5877	26	7	2130	7	-2130	multi-exon	FALSE	canonical	1	730493	junction_25	239554.24006755216	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	452	3343	5.0	0	True	TTTAAA	-14
PB.1359.26	chr10	-	3466	26	full-splice_match	KIF5B	ENST00000302418.4	5877	26	22	2389	22	-2389	multi-exon	FALSE	canonical	1	730493	junction_25	239554.24006755216	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	437	3328	15.0	15	True	TATAAA	-4
PB.1359.27	chr10	-	2300	16	incomplete-splice_match	KIF5B	ENST00000302418.4	5877	26	13	13897	13	-5700	3prime_fragment	FALSE	canonical	1	730493	junction_15	187615.56610871427	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1854	446	2299	70.0	6	True	NA	NA
PB.1359.28	chr10	-	2093	15	incomplete-splice_match	KIF5B	ENST00000302418.4	5877	26	6	19502	6	-11305	3prime_fragment	FALSE	canonical	1	730493	junction_14	193578.09166012437	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1641	453	2093	50.0	-1	True	NA	NA
PB.1359.29	chr10	-	1710	12	incomplete-splice_match	KIF5B	ENST00000302418.4	5877	26	-3	24891	-3	-16694	3prime_fragment	FALSE	canonical	1	730493	junction_11	191450.96775609103	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1248	462	1709	60.0	-10	True	GATAAA	-44
PB.9883.1	chr6	-	2707	2	full-splice_match	HSPA1L	ENST00000375654.4	2544	2	-285	122	-285	-122	multi-exon	FALSE	canonical	1	10669	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	284	2401	45.0	7256	False	AGTAAA	-10
PB.401.15	chr1	-	4109	24	novel_in_catalog	EPS15	novel	4736	23	NA	NA	-12	-964	no_combination_of_known_junctions	FALSE	canonical	1	12754	junction_16	165684.8900962659	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	36	2636	15.0	-1	True	AATAAA	-30
PB.11584.3	chr9	+	1265	14	novel_in_catalog	CBWD3	novel	2021	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	10188.31632210592	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	107	1207	30.0	NA	False	AATAAA	-20
PB.9525.2	chr5	+	2985	1	full-splice_match	PCDHGB5	ENST00000621169.1	2670	1	-48	-267	-48	267	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	818	2457	190	2646	20.0	-4862	False	AAGAAA	-6
PB.6638.16	chr2	-	4976	20	novel_in_catalog	KANSL3	novel	5253	21	NA	NA	0	-28	combination_of_known_junctions	FALSE	canonical	1	43743	junction_2	90223.20526182525	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	415	2418	75.0	-13	True	NA	NA
PB.6638.17	chr2	-	4919	20	novel_in_catalog	KANSL3	novel	5253	21	NA	NA	3	-28	combination_of_known_junctions	FALSE	canonical	1	43743	junction_2	85923.15129723564	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	97	2361	75.0	-17	True	NA	NA
PB.11584.7	chr9	+	2541	15	novel_in_catalog	CBWD5	novel	541	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	1137.956627343189	NA	2	1	TRUE	NA	NA	NA	C	coding	180	543	85	627	30.0	NA	False	AATAAA	-18
PB.817.18	chr1	+	2302	12	full-splice_match	LMNA	ENST00000368300.8	3190	12	6	882	0	36	multi-exon	FALSE	canonical	1	1221595	junction_11	3047718.3287420957	NA	11	1	TRUE	NA	NA	NA	C	coding	664	1995	207	2201	50.0	2	True	GGGGCT	-8
PB.6638.12	chr2	-	5252	22	novel_in_catalog	KANSL3	novel	5253	21	NA	NA	0	-28	combination_of_known_junctions	FALSE	canonical	1	15941	junction_16	102338.36506455517	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	891	2843	75.0	-13	True	NA	NA
PB.5906.2	chr19	-	3649	20	novel_not_in_catalog	CEP89	novel	497	2	NA	NA	9	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	35918.548046788776	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	73	2424	10.0	8	True	NA	NA
PB.8600.5	chr3	-	2241	2	full-splice_match	MB21D2	ENST00000392452.2	3368	2	305	822	305	-822	multi-exon	FALSE	canonical	1	85498	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	23	1492	35.0	-1	True	ATTAAA	-15
PB.8600.4	chr3	-	2516	2	full-splice_match	MB21D2	ENST00000392452.2	3368	2	305	547	305	-547	multi-exon	FALSE	canonical	1	85498	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	23	1492	10.0	-1	True	AATATA	-17
PB.11584.9	chr9	+	2510	15	novel_in_catalog	CBWD5	novel	541	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	1137.956627343189	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	84	425	30.0	NA	False	AATAAA	-18
PB.11584.8	chr9	+	4969	15	novel_in_catalog	CBWD5	novel	541	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	1135.738678983319	NA	4	NA	TRUE	NA	NA	NA	C	coding	180	543	85	627	30.0	NA	False	AATAAA	-18
PB.8600.1	chr3	-	3021	2	full-splice_match	MB21D2	ENST00000392452.2	3368	2	305	42	305	-42	multi-exon	FALSE	canonical	1	85498	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	23	1492	80.0	-1	True	TATAAA	-33
PB.5906.1	chr19	-	3696	20	novel_not_in_catalog	CEP89	novel	497	2	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	35918.548046788776	NA	3	1	TRUE	NA	NA	NA	C	coding	783	2352	83	2434	5.0	-2	True	NA	NA
PB.8600.3	chr3	-	2941	2	novel_not_in_catalog	MB21D2	novel	3368	2	NA	NA	68853	-3	any annotated donor/acceptor	FALSE	canonical	1	121	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	420	1263	111	1373	20.0	NA	False	AATAAA	-22
PB.8600.2	chr3	-	2918	2	novel_not_in_catalog	MB21D2	novel	3368	2	NA	NA	69244	-40	any annotated donor/acceptor	FALSE	canonical	1	330	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	420	1263	125	1387	80.0	NA	False	TATAAA	-35
PB.9330.6	chr5	-	3322	4	full-splice_match	TMEM167A	ENST00000502346.1	4630	4	99	1209	27	7	multi-exon	FALSE	canonical	1	10146	junction_2	183873.9351210195	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	2815	3165	40.0	-25	True	AATAAA	-24
PB.7529.8	chr21	+	2768	16	novel_in_catalog	MX1	novel	762	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	32344	junction_1	354198.8343311894	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	325	2313	10.0	-1087	False	AATAAA	-17
PB.9330.5	chr5	-	4116	4	full-splice_match	TMEM167A	ENST00000502346.1	4630	4	72	442	0	-442	multi-exon	FALSE	canonical	1	10146	junction_2	183873.9351210195	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	2842	3192	70.0	-1	True	NA	NA
PB.9330.3	chr5	-	4396	3	full-splice_match	TMEM167A	ENST00000504622.5	596	3	79	-3879	-7	-2	multi-exon	FALSE	canonical	1	46396	junction_2	19758.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	2682	3032	20.0	-2	True	AATAAA	-18
PB.6544.32	chr2	+	3142	9	novel_not_in_catalog	ZNF638	novel	6505	28	NA	NA	-1199	0	any annotated donor/acceptor	FALSE	canonical	1	3022	junction_1	258062.29788388187	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	570	2897	30.0	-2982	False	AATAAA	-19
PB.7529.9	chr21	+	2978	19	novel_not_in_catalog	MX1	novel	762	5	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	428945.8094723492	NA	9	1	TRUE	NA	NA	NA	C	coding	672	2019	507	2525	15.0	-6	True	AATAAA	-15
PB.11657.12	chr9	-	2018	4	novel_not_in_catalog	FAM120AOS	novel	2613	8	NA	NA	9	-7	any annotated donor/acceptor	FALSE	canonical	1	11349	junction_3	111764.87330502768	NA	0	NA	TRUE	NA	NA	NA	C	coding	24	75	476	550	40.0	-26	True	AGTAAA	-18
PB.11657.13	chr9	-	2159	3	full-splice_match	FAM120AOS	ENST00000483149.6	1432	3	-324	-403	11	-8	multi-exon	FALSE	canonical	1	20696	junction_2	130508.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	78	237	91	327	40.0	-1	True	AGTAAA	-17
PB.11657.10	chr9	-	2062	4	full-splice_match	FAM120AOS	ENST00000483056.5	1280	4	-357	-425	-3	-5	multi-exon	FALSE	canonical	1	65879	junction_3	94514.81329165051	NA	1	NA	TRUE	NA	NA	NA	C	coding	24	75	462	536	35.0	-12	True	AGTAAA	-20
PB.401.10	chr1	-	4929	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-34	-441	any annotated donor/acceptor	FALSE	canonical	1	28229	junction_16	160989.57882842654	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	132	2933	40.0	-27	False	NA	NA
PB.9544.2	chr5	+	2000	12	novel_not_in_catalog	AC091959.3	novel	3311	20	NA	NA	19	-78446	any annotated donor/acceptor	TRUE	canonical	1	29485	junction_5	75050.91475472276	NA	0	NA	TRUE	NA	NA	NA	B	coding	601	1803	198	2000	60.0	0	True	AATAAA	-37
PB.9330.8	chr5	-	2342	4	full-splice_match	TMEM167A	ENST00000502346.1	4630	4	113	2175	-16	-959	multi-exon	FALSE	canonical	1	10146	junction_2	183873.9351210195	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-11	True	AATAAA	-17
PB.9330.9	chr5	-	1053	4	full-splice_match	TMEM167A	ENST00000502346.1	4630	4	124	3453	-5	236	multi-exon	FALSE	canonical	1	10146	junction_2	183873.9351210195	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	TATAAA	-14
PB.6555.2	chr2	+	1963	10	full-splice_match	STAMBP	ENST00000339566.7	6277	10	28	4286	-18	76	multi-exon	FALSE	canonical	1	85127	junction_1	138189.91329308596	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	66	1340	15.0	-17	True	AATAAA	-44
PB.5387.5	chr18	+	2729	7	incomplete-splice_match	RALBP1	ENST00000383432.7	4224	10	46687	518	46222	-516	5prime_fragment	FALSE	canonical	1	211265	junction_1	117152.84053095862	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	73	1068	50.0	4400	False	AATAAA	-18
PB.6555.1	chr2	+	3573	9	novel_in_catalog	STAMBP	novel	6277	10	NA	NA	-19	76	intron_retention	FALSE	canonical	1	85127	junction_1	143933.238579341	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	67	825	15.0	-18	True	AATAAA	-44
PB.6555.6	chr2	+	2026	8	novel_not_in_catalog	STAMBP	novel	6277	10	NA	NA	-4	5640	intron_retention	FALSE	canonical	1	815	junction_7	170337.44148756788	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	541	1587	50.0	22	True	AATAAA	-12
PB.5906.5	chr19	-	1671	14	incomplete-splice_match	CEP89	ENST00000305768.9	5678	19	-17	39412	-5	15870	3prime_fragment	FALSE	canonical	1	62853	junction_2	33694.74093549406	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1563	107	1669	25.0	-26	True	ATTAAA	-4
PB.5387.2	chr18	+	4267	10	full-splice_match	RALBP1	ENST00000383432.7	4224	10	-53	10	-53	-8	multi-exon	FALSE	canonical	1	211265	junction_4	117769.48434385406	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	131	2098	35.0	2	True	ATTAAA	-20
PB.5387.3	chr18	+	4066	10	novel_in_catalog	RALBP1	novel	4368	10	NA	NA	-226	-520	combination_of_known_junctions	FALSE	canonical	1	22778	junction_1	153695.65824257134	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	442	2409	45.0	-24	False	AATAAA	-14
PB.5906.4	chr19	-	2519	18	novel_in_catalog	CEP89	novel	5678	19	NA	NA	4	1	no_combination_of_known_junctions	FALSE	canonical	1	1903	junction_2	37661.86659765255	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	98	2359	25.0	-17	True	AATAAA	-24
PB.6842.1	chr2	+	3975	28	full-splice_match	RAPGEF4	ENST00000540783.5	3974	28	0	-1	0	1	multi-exon	FALSE	canonical	1	4025	junction_1	54597.39209326266	NA	1	NA	TRUE	NA	NA	NA	A	coding	858	2577	278	2854	25.0	-116	False	AATATA	-11
PB.1823.1	chr11	+	6791	20	novel_in_catalog	MICAL2	novel	589	3	NA	NA	-29	0	intron_retention	FALSE	canonical	1	95108	junction_1	111152.03965814665	NA	0	NA	TRUE	NA	NA	NA	B	coding	955	2868	314	3181	20.0	-5817	False	AATAAA	-14
PB.1418.6	chr10	+	1953	2	incomplete-splice_match	TFAM	ENST00000395377.2	663	6	-192	6604	-22	-6604	3prime_fragment	FALSE	canonical	1	789308	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.561.10	chr1	+	3220	8	full-splice_match	SLC35A3	ENST00000533028.7	14759	8	452	11087	0	536	multi-exon	FALSE	canonical	1	84940	junction_1	50585.123224852076	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	169	1146	90.0	0	True	NA	NA
PB.1823.2	chr11	+	6723	19	novel_in_catalog	MICAL2	novel	589	3	NA	NA	-25	2	intron_retention	FALSE	canonical	1	24523	junction_1	115963.22974365731	NA	0	NA	TRUE	NA	NA	NA	B	coding	955	2868	239	3106	5.0	-5813	False	AATAAA	-21
PB.4534.11	chr16	-	2073	1	novel_in_catalog	CMTR2	novel	4869	3	NA	NA	4	-878	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	108	327	3	329	70.0	-9	True	NA	NA
PB.12016.4	chrX	-	6009	11	novel_in_catalog	TAB3	novel	6671	12	NA	NA	117	-660	intron_retention	FALSE	canonical	1	43696	junction_10	31601.51573010383	NA	0	NA	TRUE	NA	NA	NA	B	coding	712	2139	547	2685	30.0	136	False	NA	NA
PB.4534.10	chr16	-	2739	2	full-splice_match	CMTR2	ENST00000564690.1	2772	2	33	0	18	0	multi-exon	FALSE	canonical	1	85476	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	1	369	90.0	5	True	NA	NA
PB.12016.2	chrX	-	6258	8	novel_in_catalog	TAB3	novel	6671	12	NA	NA	4268	-27	intron_retention	FALSE	canonical	1	9962	junction_1	45353.265668257125	NA	1	NA	TRUE	NA	NA	NA	B	coding	678	2037	265	2301	70.0	NA	False	NA	NA
PB.7529.2	chr21	+	3153	19	novel_in_catalog	MX1	novel	762	5	NA	NA	11	-2	no_combination_of_known_junctions	TRUE	canonical	1	2549	junction_1	386923.8791465231	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	712	2700	15.0	-6940	False	AATAAA	-15
PB.9421.4	chr5	+	2791	12	novel_in_catalog	LMNB1	novel	3475	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	3621	junction_1	321076.93361931207	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	276	2036	25.0	-34	True	AATAAA	-19
PB.4800.7	chr17	-	1676	12	novel_in_catalog	COPS3	novel	1699	12	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	1	52489	junction_11	351263.15448602213	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	194	1405	25.0	-1	True	ATTAAA	-27
PB.4800.6	chr17	-	1527	11	novel_in_catalog	COPS3	novel	1699	12	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	1	66827	junction_10	359754.20283995295	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	186	1256	25.0	-1	True	ATTAAA	-27
PB.4800.5	chr17	-	1579	12	full-splice_match	COPS3	ENST00000268717.9	1641	12	-5	67	-5	-29	multi-exon	FALSE	canonical	1	864602	junction_11	176436.71544318707	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	113	1384	25.0	1	True	AAGAAA	-22
PB.4800.4	chr17	-	1728	12	novel_in_catalog	COPS3	novel	1699	12	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	34719	junction_8	357521.6426770726	NA	1	1	TRUE	NA	NA	NA	C	coding	293	882	570	1451	20.0	2	True	ATTAAA	-33
PB.4800.3	chr17	-	3150	11	novel_in_catalog	COPS3	novel	1699	12	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	864602	junction_10	183900.89071845193	NA	3	NA	TRUE	NA	NA	NA	C	coding	275	828	111	938	20.0	3	True	ATTAAA	-33
PB.4800.2	chr17	-	1601	11	novel_in_catalog	COPS3	novel	1699	12	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	15314	junction_8	470327.49164671416	NA	2	1	TRUE	NA	NA	NA	C	coding	318	957	368	1324	20.0	-1	True	ATTAAA	-33
PB.4800.1	chr17	-	1808	12	full-splice_match	COPS3	ENST00000268717.9	1641	12	48	-215	1	199	multi-exon	TRUE	canonical	1	864602	junction_11	176436.71544318707	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	60	1331	30.0	0	True	AATAAA	-19
PB.11266.5	chr8	+	4386	23	novel_not_in_catalog	VPS13B	novel	2822	18	NA	NA	11	-18171	any annotated donor/acceptor	FALSE	canonical	1	635	junction_22	48886.46362411059	NA	1	NA	TRUE	NA	NA	NA	B	coding	1030	3093	93	3185	20.0	11	True	NA	NA
PB.561.15	chr1	+	2799	13	novel_in_catalog	AC118553.2	novel	3175	20	NA	NA	68011	-55	no_combination_of_known_junctions	FALSE	canonical	1	19763	junction_1	225870.4694944403	NA	1	NA	TRUE	NA	NA	NA	B	coding	468	1407	365	1771	10.0	-3	True	TATAAA	-16
PB.978.1	chr1	+	2560	13	novel_in_catalog	NPL	novel	2144	13	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	1	29922	junction_1	25805.088207749304	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	124	1086	15.0	-8500	False	AATAAA	-17
PB.4800.8	chr17	-	1736	13	novel_in_catalog	COPS3	novel	1699	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	22391	junction_5	443229.8615256911	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	111	1475	35.0	3	True	ATTAAA	-17
PB.10211.5	chr6	-	3918	18	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	43565	junction_5	162819.98232875575	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	106	2664	20.0	-1	True	AATAAA	-16
PB.10211.4	chr6	-	4161	18	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	57410	junction_17	158011.56976747184	NA	1	NA	TRUE	NA	NA	NA	C	coding	935	2808	101	2908	20.0	50	False	AATAAA	-15
PB.10211.7	chr6	-	3805	17	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	11645	junction_1	175816.4790409573	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	106	2571	20.0	-1	True	AATAAA	-16
PB.10211.1	chr6	-	4485	20	full-splice_match	EPB41L2	ENST00000337057.7	4457	20	-31	3	-31	0	multi-exon	FALSE	canonical	1	156605	junction_7	160860.36086928696	NA	0	NA	TRUE	NA	NA	NA	C	coding	1005	3018	214	3231	20.0	-76	False	AATAAA	-16
PB.10211.3	chr6	-	4314	19	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	8388	junction_7	170801.65385355937	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	106	3060	20.0	-1	True	AATAAA	-16
PB.10211.2	chr6	-	4063	17	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	1360	junction_14	174307.9127580231	NA	4	NA	TRUE	NA	NA	NA	C	coding	900	2703	106	2808	15.0	-1	True	AATAAA	-17
PB.9162.1	chr5	-	4837	36	novel_in_catalog	DROSHA	novel	5305	35	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	1	117110	junction_30	97129.09151241842	NA	0	NA	TRUE	NA	NA	NA	C	coding	1365	4098	457	4554	25.0	-33	False	AATAAA	-18
PB.1829.9	chr11	+	4378	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	41	845	0	-845	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	104	1651	20.0	0	True	AATAAA	-25
PB.1829.8	chr11	+	2250	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	34	2980	-7	-2980	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	111	1658	35.0	-7	True	ATTAAA	-15
PB.9162.5	chr5	-	4604	36	novel_in_catalog	DROSHA	novel	5305	35	NA	NA	-14	111	combination_of_known_junctions	FALSE	canonical	1	117110	junction_30	97129.09151241842	NA	0	NA	TRUE	NA	NA	NA	C	coding	1365	4098	376	4473	20.0	-15	True	AATAAA	-18
PB.5004.1	chr17	+	1085	6	full-splice_match	VPS25	ENST00000253794.6	1101	6	15	1	-7	-1	multi-exon	FALSE	canonical	1	854782	junction_5	154051.01032709912	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	26	556	25.0	2	True	ATTAAA	-13
PB.5004.2	chr17	+	1761	5	novel_in_catalog	VPS25	novel	1101	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	854782	junction_4	172053.5810894022	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	27	326	25.0	7	True	ATTAAA	-13
PB.4090.1	chr15	-	2430	1	antisense	novelGene_LINC01578_AS_novelGene_AC013394.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-5356	False	NA	NA
PB.1829.3	chr11	+	5045	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	-2	221	-2	-221	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	147	1694	80.0	-21	True	NA	NA
PB.1829.2	chr11	+	2839	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	-2	2427	-2	-2427	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	147	1694	35.0	-21	True	AATAAA	-40
PB.1829.1	chr11	+	2985	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	-3	2282	-3	-2282	multi-exon	TRUE	canonical	1	150215	junction_9	85298.66561017255	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	148	1695	30.0	-22	True	ATTAAA	-29
PB.1829.7	chr11	+	4223	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	15	1026	15	-1026	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	2	NA	TRUE	NA	NA	NA	C	coding	515	1548	130	1677	30.0	-4	True	AATAAA	-15
PB.1829.6	chr11	+	3148	3	incomplete-splice_match	FAR1	ENST00000532701.1	1109	8	-40	9952	1	2565	3prime_fragment	FALSE	canonical	1	266365	junction_1	53678.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	144	512	35.0	-18	True	NA	NA
PB.1829.5	chr11	+	3573	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	0	1691	0	-1691	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	4	NA	TRUE	NA	NA	NA	C	coding	515	1548	145	1692	15.0	-19	True	AATAGA	-12
PB.1829.4	chr11	+	4062	3	incomplete-splice_match	FAR1	ENST00000532701.1	1109	8	-42	9040	-1	3477	3prime_fragment	FALSE	canonical	1	266365	junction_1	53678.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	146	514	100.0	-20	True	NA	NA
PB.1045.9	chr1	+	2069	8	novel_not_in_catalog	TMEM183A	novel	3019	8	NA	NA	-8	-938	any annotated donor/acceptor	FALSE	canonical	1	241	junction_7	52559.0221855586	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	123	1199	70.0	21	True	AAAAAG	-24
PB.1045.8	chr1	+	2611	7	novel_in_catalog	TMEM183A	novel	3019	8	NA	NA	-8	-1310	intron_retention	FALSE	canonical	1	241	junction_6	55651.488791106625	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	123	719	25.0	21	True	AATAAA	-26
PB.11203.1	chr8	-	4032	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	6	3	4	-3	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	110	664	30.0	11	True	AATACA	-20
PB.1045.1	chr1	+	1592	8	full-splice_match	TMEM183A	ENST00000367242.3	3019	8	-42	1469	-42	-1469	multi-exon	FALSE	canonical	1	241	junction_7	51698.47371725666	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	174	1253	45.0	-4548	False	ATTAAA	-15
PB.1045.3	chr1	+	1891	9	novel_in_catalog	TMEM183A	novel	3019	8	NA	NA	-12	-1304	combination_of_known_junctions	FALSE	canonical	1	241	junction_8	47052.909453082706	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	144	803	15.0	0	True	AATAAA	-32
PB.1045.2	chr1	+	4975	6	novel_in_catalog	TMEM183A	novel	3019	8	NA	NA	-14	-1309	intron_retention	FALSE	canonical	1	241	junction_5	56838.29907518345	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	146	742	25.0	-2	True	AATAAA	-27
PB.1045.5	chr1	+	3030	8	full-splice_match	TMEM183A	ENST00000367242.3	3019	8	-7	-4	-7	4	multi-exon	FALSE	canonical	1	241	junction_7	51698.47371725666	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	139	1218	15.0	5	True	AATAAA	-23
PB.872.1	chr1	+	1768	13	full-splice_match	PPOX	ENST00000367999.8	1740	13	-26	-2	-21	0	multi-exon	TRUE	canonical	1	90448	junction_3	46436.77486797386	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	293	1726	5.0	-846	False	AATAAA	-16
PB.1045.7	chr1	+	1716	8	full-splice_match	TMEM183A	ENST00000367242.3	3019	8	-6	1309	-6	-1309	multi-exon	FALSE	canonical	1	241	junction_7	51698.47371725666	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	138	1217	25.0	6	True	AATAAA	-27
PB.1045.6	chr1	+	1916	7	novel_in_catalog	TMEM183A	novel	3019	8	NA	NA	-7	-1309	intron_retention	FALSE	canonical	1	241	junction_6	43035.859927119694	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	584	1417	25.0	5	True	AATAAA	-27
PB.6851.33	chr2	-	6200	4	incomplete-splice_match	ATF2	ENST00000409833.5	1335	8	-5	10064	-5	2486	3prime_fragment	FALSE	canonical	1	271699	junction_2	63031.35105820137	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	25	True	NA	NA
PB.7705.1	chr22	+	2597	2	full-splice_match	SLC35E4	ENST00000343605.4	2714	2	116	1	116	-1	multi-exon	FALSE	canonical	1	49794	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	684	1736	10.0	-13	True	AATACA	-15
PB.7754.9	chr22	+	2669	8	incomplete-splice_match	CYTH4	ENST00000248901.10	3206	13	16841	-1	-1658	1	5prime_fragment	FALSE	canonical	1	145353	junction_3	23010.9112308372	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	136	834	5.0	-2487	False	AATAAA	-19
PB.1240.39	chr1	-	2485	12	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	14	53	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	1903572.3562518791	NA	1	NA	TRUE	NA	NA	NA	C	coding	653	1962	211	2172	10.0	-9	True	AGTAAA	-10
PB.7705.2	chr22	+	2192	2	full-splice_match	SLC35E4	ENST00000343605.4	2714	2	32	490	32	-490	multi-exon	FALSE	canonical	1	49794	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	768	1820	75.0	-140	False	NA	NA
PB.5584.5	chr19	-	3384	5	novel_not_in_catalog	MOB3A	novel	3391	5	NA	NA	89	0	any annotated donor/acceptor	FALSE	canonical	1	2169	junction_4	230870.83062328922	NA	3	NA	TRUE	NA	NA	NA	C	coding	217	654	374	1027	25.0	9771	False	AATAAA	-21
PB.4876.1	chr17	-	2831	7	incomplete-splice_match	SLC6A4	ENST00000394821.2	2160	15	22895	-2117	-1434	1543	5prime_fragment	FALSE	canonical	1	11933	junction_4	1975.4235621759703	NA	0	NA	TRUE	NA	NA	NA	A	coding	245	738	16	753	80.0	-1	True	ATTAAA	-2
PB.7984.9	chr3	-	3433	23	novel_not_in_catalog	SLC4A7	novel	7970	28	NA	NA	12	-42	any annotated donor/acceptor	FALSE	canonical	1	7250	junction_22	74189.79253529257	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2706	728	3433	70.0	-1	True	NA	NA
PB.5584.6	chr19	-	3561	5	novel_not_in_catalog	MOB3A	novel	3391	5	NA	NA	-1575	0	any annotated donor/acceptor	FALSE	canonical	1	277	junction_4	231651.47155411617	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	551	1204	25.0	9287	False	AATAAA	-21
PB.5584.1	chr19	-	3383	5	full-splice_match	MOB3A	ENST00000357066.7	3391	5	-1	9	-1	-9	multi-exon	FALSE	canonical	1	77045	junction_4	200224.83613475002	NA	8	NA	TRUE	NA	NA	NA	C	coding	217	654	382	1035	35.0	-12	True	AATAAA	-12
PB.7418.6	chr20	-	2032	10	full-splice_match	GMEB2	ENST00000370077.1	4223	10	-31	2222	-31	-2222	multi-exon	FALSE	canonical	1	34556	junction_9	51642.98514791389	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	175	1767	20.0	2	True	AATATA	-25
PB.5584.3	chr19	-	3411	5	novel_in_catalog	MOB3A	novel	3391	5	NA	NA	-24	4	combination_of_known_junctions	FALSE	canonical	1	3596	junction_4	230282.2266160591	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	397	1050	10.0	11	True	AATAAA	-25
PB.5584.2	chr19	-	3304	5	novel_not_in_catalog	MOB3A	novel	3391	5	NA	NA	-29	17	any annotated donor/acceptor	FALSE	canonical	1	638	junction_2	211258.85630784807	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	348	791	20.0	22	True	AATAAA	-38
PB.7984.2	chr3	-	7695	25	full-splice_match	SLC4A7	ENST00000455077.5	3775	25	-38	-3882	11	-1	multi-exon	FALSE	canonical	1	104421	junction_24	49418.86765081621	NA	2	NA	TRUE	NA	NA	NA	C	coding	1131	3396	260	3655	10.0	-2	True	AATAAA	-14
PB.5584.9	chr19	-	3399	5	novel_not_in_catalog	MOB3A	novel	3391	5	NA	NA	-2919	0	any annotated donor/acceptor	FALSE	canonical	1	848	junction_4	231415.84830181792	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	389	1042	25.0	3419	False	AATAAA	-21
PB.5584.8	chr19	-	3379	5	novel_in_catalog	MOB3A	novel	3391	5	NA	NA	935	0	combination_of_known_junctions	FALSE	canonical	1	31802	junction_4	218681.09821953063	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	369	1022	25.0	-1	True	AATAAA	-21
PB.7984.5	chr3	-	6985	25	novel_in_catalog	SLC4A7	novel	7970	28	NA	NA	-19	-777	combination_of_known_junctions	FALSE	canonical	1	23388	junction_24	58020.04650691803	NA	7	1	TRUE	NA	NA	NA	C	coding	1135	3408	314	3721	50.0	-56	False	ATTAAA	-13
PB.3141.2	chr13	-	3502	10	full-splice_match	NUFIP1	ENST00000379161.4	3492	10	-9	-1	-9	1	multi-exon	FALSE	canonical	1	3051	junction_8	22762.066352097383	NA	2	NA	TRUE	NA	NA	NA	C	coding	495	1488	57	1544	10.0	-22	False	NA	NA
PB.3141.3	chr13	-	2701	10	full-splice_match	NUFIP1	ENST00000379161.4	3492	10	10	781	10	-781	multi-exon	FALSE	canonical	1	3051	junction_8	22762.066352097383	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	38	1525	35.0	-3	True	AATAAA	-20
PB.9297.12	chr5	+	3953	19	novel_not_in_catalog	HMGCR	novel	3395	20	NA	NA	-10	307	any annotated donor/acceptor	FALSE	canonical	1	8553	junction_17	218808.82161000985	NA	1	NA	TRUE	NA	NA	NA	C	coding	820	2463	103	2565	20.0	1	True	AATAAA	-24
PB.3141.1	chr13	-	4036	10	full-splice_match	NUFIP1	ENST00000379161.4	3492	10	12	-556	12	556	multi-exon	FALSE	canonical	1	3051	junction_8	22762.066352097383	NA	2	NA	TRUE	NA	NA	NA	C	coding	495	1488	36	1523	20.0	-1	True	NA	NA
PB.9297.14	chr5	+	4355	19	full-splice_match	HMGCR	ENST00000343975.9	3681	19	2	-676	2	-5	multi-exon	FALSE	canonical	1	96707	junction_12	174780.20293817922	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	91	2598	45.0	13	True	AGTAAA	-23
PB.9297.15	chr5	+	3481	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	66	1038	2	308	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	91	2757	35.0	13	True	TATAAA	-6
PB.3141.4	chr13	-	1713	10	full-splice_match	NUFIP1	ENST00000379161.4	3492	10	11	1768	11	-1768	multi-exon	FALSE	canonical	1	3051	junction_8	22762.066352097383	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	37	1524	20.0	-2	True	AATAAA	-18
PB.9297.17	chr5	+	4317	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	72	196	-6	-196	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	6	NA	TRUE	NA	NA	NA	C	coding	888	2667	85	2751	20.0	19	True	NA	NA
PB.2296.6	chr11	+	4368	26	novel_not_in_catalog	SIDT2	novel	4406	26	NA	NA	49	1	intron_retention	FALSE	non_canonical	0	0	junction_10	94633.64396830548	NA	2	1	TRUE	NA	NA	NA	C	coding	431	1296	1696	2991	0.0	-8347	False	AATAAA	-14
PB.9297.19	chr5	+	4135	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	74	376	-4	305	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	83	2749	25.0	21	True	AATAAA	-22
PB.2296.4	chr11	+	2943	25	novel_not_in_catalog	SIDT2	novel	4406	26	NA	NA	0	-14	intron_retention	FALSE	non_canonical	0	0	junction_10	115118.66994769372	NA	3	2	TRUE	NA	NA	NA	C	coding	393	1182	1745	2926	90.0	-7	True	NA	NA
PB.2296.5	chr11	+	4385	26	novel_not_in_catalog	SIDT2	novel	4406	26	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_10	112723.51796267538	NA	3	1	TRUE	NA	NA	NA	C	coding	431	1296	1715	3010	5.0	0	True	AATAAA	-12
PB.2296.2	chr11	+	4074	26	full-splice_match	SIDT2	ENST00000324225.8	4406	26	330	2	-118	-1	multi-exon	FALSE	canonical	1	201014	junction_1	71400.25263260628	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	202	2700	5.0	-9949	False	AATAAA	-11
PB.2296.3	chr11	+	3024	24	incomplete-splice_match	SIDT2	ENST00000324225.8	4406	26	3	3305	0	-14	3prime_fragment	FALSE	canonical	1	201014	junction_1	73214.0725477579	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	529	2907	90.0	-7	True	NA	NA
PB.11739.3	chr9	-	3353	12	full-splice_match	ALAD	ENST00000482847.5	3247	12	-100	-6	-10	4	multi-exon	FALSE	canonical	1	41510	junction_10	106343.53341120543	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	563	1366	20.0	9331	False	NA	NA
PB.2296.1	chr11	+	3039	24	novel_not_in_catalog	SIDT2	novel	4406	26	NA	NA	1	-14	intron_retention	TRUE	non_canonical	0	0	junction_10	97923.51279793883	NA	1	1	TRUE	NA	NA	NA	C	coding	391	1176	1747	2922	90.0	-9	True	NA	NA
PB.323.5	chr1	-	2688	32	novel_in_catalog	COL9A2	novel	2862	32	NA	NA	2	-40	combination_of_known_junctions	FALSE	canonical	1	3572	junction_31	67806.63352480126	NA	0	NA	TRUE	NA	NA	NA	B	coding	595	1788	246	2033	30.0	-1	True	AATAAA	-24
PB.7596.2	chr22	-	2167	6	full-splice_match	BID	ENST00000622694.4	2199	6	35	-3	29	-1	multi-exon	FALSE	canonical	1	280414	junction_5	146206.77450597152	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	139	726	15.0	8	True	AATAAA	-17
PB.7418.1	chr20	-	4262	10	full-splice_match	GMEB2	ENST00000370077.1	4223	10	-39	0	-39	0	multi-exon	FALSE	canonical	1	34556	junction_9	51642.98514791389	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	183	1775	20.0	-6	True	AATAAA	-17
PB.5935.19	chr19	+	2091	5	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-8	-4	no_combination_of_known_junctions	FALSE	canonical	1	50	junction_4	26836.022218279668	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	511	1809	35.0	-1	True	AATAAA	-20
PB.5935.18	chr19	+	2064	5	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	37895	junction_4	7526.679961975266	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	136	1380	35.0	-2	True	AATAAA	-23
PB.7596.3	chr22	-	2090	5	full-splice_match	BID	ENST00000399767.5	2129	5	39	0	33	0	multi-exon	FALSE	canonical	1	25333	junction_4	263331.8307557738	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	353	652	20.0	12	True	AATAAA	-14
PB.5935.15	chr19	+	3507	2	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	54533	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	1205	2089	35.0	-3	True	AATAAA	-23
PB.5935.14	chr19	+	1740	4	full-splice_match	ZBTB32	ENST00000481182.1	1733	4	-12	5	-12	-5	multi-exon	FALSE	canonical	1	1437	junction_2	34956.8892431171	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	139	1047	35.0	-5	True	AATAAA	-19
PB.5935.17	chr19	+	2553	2	incomplete-splice_match	ZBTB32	ENST00000481182.1	1733	4	-10	-5	-10	5	intron_retention	FALSE	canonical	1	45462	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	137	1021	30.0	-3	True	AATAAA	-29
PB.5935.16	chr19	+	3435	2	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	87052	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	1205	2089	35.0	-3	True	AATAAA	-23
PB.5935.11	chr19	+	2449	3	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-12	7	intron_retention	FALSE	canonical	1	45462	junction_1	4535.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	139	1023	25.0	-5	True	AATAAA	-31
PB.5935.10	chr19	+	2753	3	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-12	7	intron_retention	FALSE	canonical	1	4125	junction_1	41463.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	515	1399	25.0	-5	True	AATAAA	-31
PB.5935.13	chr19	+	1833	5	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-12	14	no_combination_of_known_junctions	FALSE	canonical	1	1186	junction_3	30820.589043689608	NA	5	1	TRUE	NA	NA	NA	C	coding	464	1395	139	1533	20.0	-5	True	AATAAA	-38
PB.5935.12	chr19	+	1895	6	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-12	7	combination_of_known_junctions	FALSE	canonical	1	37895	junction_4	16764.474956287777	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	139	1602	25.0	-5	True	AATAAA	-31
PB.3162.3	chr13	+	6197	26	full-splice_match	FNDC3A	ENST00000492622.6	6286	26	88	1	-69	0	multi-exon	FALSE	canonical	1	75546	junction_1	73652.39721454828	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	218	3814	25.0	-947	False	AATAAA	-18
PB.3162.2	chr13	+	3916	26	full-splice_match	FNDC3A	ENST00000492622.6	6286	26	11	2359	11	-2173	multi-exon	FALSE	canonical	1	75546	junction_1	73652.39721454828	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	295	3891	25.0	11	True	AATATA	-19
PB.3162.1	chr13	+	5866	26	full-splice_match	FNDC3A	ENST00000492622.6	6286	26	143	277	-14	-91	multi-exon	FALSE	canonical	1	75546	junction_1	73652.39721454828	NA	1	NA	TRUE	NA	NA	NA	C	coding	1198	3597	163	3759	65.0	4	True	AATGAA	-9
PB.3162.7	chr13	+	5245	26	full-splice_match	FNDC3A	ENST00000541916.5	6328	26	21	1062	21	-877	multi-exon	FALSE	canonical	1	104791	junction_1	69796.33906876204	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	328	3924	25.0	-32	True	AATACA	-22
PB.3162.6	chr13	+	6310	26	full-splice_match	FNDC3A	ENST00000541916.5	6328	26	17	1	17	-1	multi-exon	FALSE	canonical	1	104791	junction_1	69796.33906876204	NA	19	2	TRUE	NA	NA	NA	C	coding	1198	3597	332	3928	20.0	-36	True	AATAAA	-17
PB.3162.5	chr13	+	5947	26	full-splice_match	FNDC3A	ENST00000541916.5	6328	26	195	186	131	-1	multi-exon	FALSE	canonical	1	104791	junction_1	69796.33906876204	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	154	3750	30.0	1	True	AATAAA	-20
PB.3162.4	chr13	+	5206	26	full-splice_match	FNDC3A	ENST00000492622.6	6286	26	11	1069	11	-883	multi-exon	FALSE	canonical	1	75546	junction_1	73652.39721454828	NA	1	NA	TRUE	NA	NA	NA	C	coding	1198	3597	295	3891	25.0	11	True	AATACA	-16
PB.2022.1	chr11	+	2427	13	novel_in_catalog	NUDT22	novel	746	2	NA	NA	-2	3594	no_combination_of_known_junctions	TRUE	canonical	1	13169	junction_7	231710.8066323671	NA	0	NA	TRUE	NA	NA	NA	B	coding	273	822	138	959	5.0	-12	True	AATAAA	-12
PB.3162.9	chr13	+	5698	24	full-splice_match	FNDC3A	ENST00000398316.7	5714	24	15	1	15	-1	multi-exon	FALSE	canonical	1	138476	junction_1	65069.45237426956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1142	3429	73	3501	30.0	11	True	AATAAA	-20
PB.3162.8	chr13	+	6064	25	novel_in_catalog	FNDC3A	novel	6286	26	NA	NA	26	1	no_combination_of_known_junctions	FALSE	canonical	1	4428	junction_10	96056.37322524466	NA	1	NA	TRUE	NA	NA	NA	C	coding	1180	3543	323	3865	30.0	-27	True	AATAAA	-22
PB.193.2	chr1	+	3934	14	full-splice_match	CEP85	ENST00000451429.7	3922	14	0	-12	0	0	multi-exon	FALSE	canonical	1	120872	junction_1	38434.86598799055	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	140	2419	15.0	0	True	AATAAA	-15
PB.872.2	chr1	+	2656	12	novel_in_catalog	PPOX	novel	1686	13	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	11282	junction_11	57370.14091287938	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	247	1728	40.0	-47	True	AATAAA	-32
PB.11092.12	chr8	+	4055	16	novel_not_in_catalog	DDHD2	novel	568	4	NA	NA	1402	-9	any annotated donor/acceptor	FALSE	canonical	1	2264	junction_4	108629.60236129623	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	714	1871	40.0	2714	False	AGTAAA	-7
PB.11092.11	chr8	+	2456	4	incomplete-splice_match	DDHD2	ENST00000519857.5	1668	5	-12	-315	-12	315	intron_retention	FALSE	canonical	1	97911	junction_1	98608.46233575606	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	210	749	90.0	-28	False	NA	NA
PB.11092.10	chr8	+	2629	18	novel_in_catalog	DDHD2	novel	568	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	19715	junction_17	107696.94498367449	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	218	2353	10.0	-36	False	TATAAA	-21
PB.10149.9	chr6	-	2953	6	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	9	1	intron_retention	FALSE	canonical	1	751	junction_5	952392.1697444599	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	179	619	20.0	1188	False	AATAAA	-19
PB.4966.18	chr17	-	3734	28	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	31	7881	31	-14	3prime_fragment	FALSE	canonical	1	528600	junction_24	222475.97725638558	NA	0	NA	TRUE	NA	NA	NA	C	coding	1202	3606	129	3734	60.0	3	True	NA	NA
PB.4966.19	chr17	-	3941	27	novel_in_catalog	TOP2A	novel	5758	35	NA	NA	31	74	intron_retention	FALSE	canonical	1	528600	junction_23	217480.7746056612	NA	15	NA	TRUE	NA	NA	NA	C	coding	941	2826	129	2954	85.0	3	True	NA	NA
PB.11902.9	chr9	+	1719	13	full-splice_match	PMPCA	ENST00000371717.7	2174	13	92	363	1	-362	multi-exon	FALSE	canonical	1	216493	junction_11	201368.53276771135	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	8	1585	10.0	4	True	TATAAA	-29
PB.10149.8	chr6	-	2457	7	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	-43	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	884852.5991059032	NA	3	1	TRUE	NA	NA	NA	C	coding	176	531	123	653	20.0	418	False	AATAAA	-20
PB.4581.13	chr16	-	3377	14	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	331	intron_retention	FALSE	canonical	0	0	junction_8	93865.31232909767	NA	1	1	TRUE	NA	NA	NA	C	coding	460	1383	1435	2817	25.0	-16	True	AATACA	-18
PB.4581.12	chr16	-	3459	14	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	331	intron_retention	FALSE	canonical	1	123487	junction_13	59617.0032760898	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1286	2899	25.0	-16	True	AATACA	-18
PB.4581.11	chr16	-	4356	11	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	331	intron_retention	FALSE	canonical	1	123487	junction_10	51793.78084953829	NA	6	NA	TRUE	NA	NA	NA	C	coding	448	1347	2450	3796	25.0	-9	True	AATACA	-18
PB.4581.10	chr16	-	4645	13	full-splice_match	TAF1C	ENST00000564774.5	4637	13	-15	7	-2	-6	multi-exon	FALSE	canonical	1	123487	junction_12	58552.91108405001	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	2219	3565	45.0	1	True	ATTAAA	-11
PB.4966.10	chr17	-	3996	30	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	18	4178	18	-3132	3prime_fragment	FALSE	canonical	1	528600	junction_26	231430.481109245	NA	0	NA	TRUE	NA	NA	NA	C	coding	1285	3855	142	3996	75.0	-10	False	AAGAAA	-28
PB.4966.11	chr17	-	3878	29	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	54	6971	54	896	3prime_fragment	FALSE	canonical	1	528600	junction_25	230477.3226527224	NA	0	NA	TRUE	NA	NA	NA	C	coding	1257	3771	106	3876	70.0	-16	True	NA	NA
PB.4581.15	chr16	-	3250	15	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	331	combination_of_known_junctions	FALSE	canonical	1	35827	junction_14	73840.5198205731	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	159	2690	25.0	-21	True	AATACA	-18
PB.2364.5	chr11	+	1786	11	full-splice_match	ST3GAL4	ENST00000444328.6	1812	11	24	2	24	-2	multi-exon	FALSE	canonical	1	150202	junction_1	105785.4653647655	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	196	1197	20.0	22	True	ATTAAA	-19
PB.12096.4	chrX	+	5080	1	novel_in_catalog	TSR2	novel	1534	5	NA	NA	7	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	C	coding	173	522	3622	4143	85.0	2	True	AATAAA	-14
PB.12096.2	chrX	+	1531	5	full-splice_match	TSR2	ENST00000375151.4	1534	5	3	0	3	0	multi-exon	FALSE	canonical	1	519663	junction_1	94128.26197933329	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	19	594	85.0	-2	True	AATAAA	-14
PB.12096.3	chrX	+	4180	5	novel_not_in_catalog	TSR2	novel	1534	5	NA	NA	3	2538	intron_retention	FALSE	canonical	1	7759	junction_2	288491.0058072652	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	NA	NA
PB.6363.20	chr2	-	1478	10	incomplete-splice_match	HADHA	ENST00000643063.1	2748	21	-25	21178	-3	-163	3prime_fragment	FALSE	canonical	1	432900	junction_2	330572.3194242164	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	34	1077	90.0	-20	True	NA	NA
PB.12096.1	chrX	+	1341	5	full-splice_match	TSR2	ENST00000375151.4	1534	5	1	192	1	-192	multi-exon	FALSE	canonical	1	519663	junction_1	94128.26197933329	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	21	596	15.0	-4	True	AATAAA	-17
PB.655.3	chr1	-	10916	34	full-splice_match	NOTCH2	ENST00000256646.6	11389	34	-30	503	-30	-503	multi-exon	TRUE	canonical	1	6352	junction_32	113601.55284281708	NA	1	NA	TRUE	NA	NA	NA	C	coding	2471	7416	251	7666	15.0	0	True	AATAAA	-18
PB.3381.1	chr14	+	2159	2	antisense	novelGene_BAZ1A_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-18	True	AATAAA	-17
PB.6281.2	chr19	+	2270	16	incomplete-splice_match	TRIM28	ENST00000253024.9	2960	17	1016	1	318	0	5prime_fragment	FALSE	canonical	1	2491519	junction_2	757369.7831021956	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	3	2108	5.0	-4723	False	AATAAA	-14
PB.3839.6	chr15	+	2591	10	novel_not_in_catalog	SORD	novel	4909	9	NA	NA	-1	935	intron_retention	FALSE	canonical	1	17	junction_8	342145.00913873233	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	91	882	15.0	-1	True	AATAAA	-19
PB.3839.4	chr15	+	4849	9	full-splice_match	SORD	ENST00000267814.13	4909	9	57	3	-20	-3	multi-exon	FALSE	canonical	1	4451	junction_8	275191.1027206537	NA	3	NA	TRUE	NA	NA	NA	C	coding	357	1074	124	1197	15.0	-34	True	NA	NA
PB.3839.5	chr15	+	2480	9	full-splice_match	SORD	ENST00000267814.13	4909	9	84	2345	7	935	multi-exon	FALSE	canonical	1	4451	junction_8	275191.1027206537	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	97	1170	15.0	-7	True	AATAAA	-19
PB.3839.2	chr15	+	2479	1	novel_in_catalog	SORD	novel	4909	9	NA	NA	-35	-45058	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	3	314	100.0	-49	True	NA	NA
PB.3839.3	chr15	+	2237	9	full-splice_match	SORD	ENST00000267814.13	4909	9	43	2629	-34	651	multi-exon	FALSE	canonical	1	4451	junction_8	275191.1027206537	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	138	1211	30.0	-48	True	AGTAAA	-24
PB.3839.1	chr15	+	1739	9	full-splice_match	SORD	ENST00000267814.13	4909	9	94	3076	3	204	multi-exon	FALSE	canonical	1	4451	junction_8	275191.1027206537	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	87	1160	75.0	3	True	AAGAAA	-45
PB.10149.2	chr6	-	2985	6	full-splice_match	CD164	ENST00000310786.9	3365	6	337	43	-18	-39	multi-exon	FALSE	canonical	1	1733127	junction_4	302048.6974468852	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	98	691	50.0	-9	True	ATTAAA	-26
PB.11050.6	chr8	+	3917	30	full-splice_match	PTK2B	ENST00000420218.3	3941	30	18	6	18	-1	multi-exon	FALSE	canonical	1	256180	junction_1	142725.0670814454	NA	1	NA	TRUE	NA	NA	NA	C	coding	967	2904	138	3041	0.0	-2	True	ATTAAA	-14
PB.5746.1	chr19	-	4896	4	full-splice_match	ZNF709	ENST00000397732.7	4910	4	12	2	12	-2	multi-exon	FALSE	canonical	1	27141	junction_3	5624.858575999933	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	161	2086	30.0	-23	True	ATTAAA	-18
PB.10479.4	chr7	+	3781	21	novel_not_in_catalog	BBS9	novel	613	4	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_14	27923.544957436905	NA	2	1	TRUE	NA	NA	NA	C	coding	524	1575	501	2075	40.0	-11	True	AATAAA	-14
PB.10479.7	chr7	+	3611	10	novel_in_catalog	BBS9	novel	613	4	NA	NA	-2	1795	combination_of_known_junctions	FALSE	canonical	1	4859	junction_9	27933.981281267843	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	489	1556	25.0	1	True	NA	NA
PB.5746.2	chr19	-	3526	4	full-splice_match	ZNF709	ENST00000397732.7	4910	4	16	1368	16	-1368	multi-exon	FALSE	canonical	1	27141	junction_3	5624.858575999933	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	157	2082	30.0	-19	True	AATAAA	-31
PB.2491.3	chr12	+	1406	8	full-splice_match	DERA	ENST00000532964.5	854	8	-28	-524	6	-5	multi-exon	FALSE	canonical	1	15158	junction_5	169805.29451398033	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	50	877	55.0	3	True	ATTAAA	-7
PB.2491.2	chr12	+	1536	9	full-splice_match	DERA	ENST00000428559.6	1705	9	162	7	5	-5	multi-exon	FALSE	canonical	1	250485	junction_1	104462.52571257312	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	51	1007	55.0	2	True	ATTAAA	-7
PB.2491.1	chr12	+	1664	9	full-splice_match	DERA	ENST00000428559.6	1705	9	139	-98	9	98	multi-exon	FALSE	canonical	1	250485	junction_1	104462.52571257312	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	74	1030	20.0	-21	False	ATTAAA	-24
PB.3956.1	chr15	-	2037	3	full-splice_match	LARP6	ENST00000299213.9	4469	3	-10	2442	-10	1310	multi-exon	FALSE	canonical	1	132553	junction_2	52924.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	491	1476	82	1557	65.0	-13	True	NA	NA
PB.4532.18	chr16	+	3570	22	incomplete-splice_match	SF3B3	ENST00000302516.9	9720	26	8689	5371	5576	-2	5prime_fragment	FALSE	canonical	1	710423	junction_1	294298.4127084712	NA	2	NA	TRUE	NA	NA	NA	C	coding	933	2802	285	3086	15.0	-2744	False	AATAGA	-19
PB.6393.1	chr2	-	1992	1	antisense	novelGene_CLIP4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	132	399	18	416	100.0	NA	False	NA	NA
PB.9083.5	chr4	-	1631	7	full-splice_match	RWDD4	ENST00000327570.13	2590	7	-17	976	6	16	multi-exon	FALSE	canonical	1	92	junction_1	11507.160461594724	NA	1	1	TRUE	NA	NA	NA	C	coding	187	564	244	807	5.0	9	False	AATAAA	-17
PB.11727.1	chr9	-	1673	1	genic	AL390067.1	novel	NA	NA	NA	NA	-122	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-14	False	AATAAA	-14
PB.525.9	chr1	-	1803	11	full-splice_match	GBP4	ENST00000355754.6	6127	11	33	4291	33	-2941	multi-exon	FALSE	canonical	1	129336	junction_6	35510.65960187167	NA	4	NA	TRUE	NA	NA	NA	C	coding	579	1737	66	1802	50.0	-22	True	AAGAAA	-19
PB.9761.1	chr6	+	2251	1	genic	AL137003.1	novel	NA	NA	NA	NA	-218	1292	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	21	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1697	False	CATAAA	-14
PB.193.1	chr1	+	4060	15	novel_not_in_catalog	CEP85	novel	2663	13	NA	NA	-43	4	any annotated donor/acceptor	FALSE	canonical	1	3382	junction_12	75343.73067455037	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	183	2033	20.0	-43	False	AATAAA	-19
PB.3294.7	chr14	+	1904	12	novel_in_catalog	METTL17	novel	1749	14	NA	NA	1	-2	intron_retention	FALSE	canonical	1	210063	junction_3	203812.11464074106	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	529	939	20.0	1	True	AATAAA	-22
PB.11633.24	chr9	+	4780	18	incomplete-splice_match	DAPK1	ENST00000622514.4	5772	26	142264	3	1361	0	5prime_fragment	FALSE	canonical	1	158807	junction_6	26829.79236713672	NA	40	2	TRUE	NA	NA	NA	C	coding	1167	3504	11	3514	20.0	-2569	False	AATAAA	-15
PB.7047.8	chr2	+	3472	8	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	-1	-1360	combination_of_known_junctions	FALSE	canonical	1	5562	junction_2	83453.60120230075	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	206	1153	40.0	1	True	AATAAA	-16
PB.11619.1	chr9	+	2453	2	incomplete-splice_match	AL137847.1	ENST00000416473.1	444	3	-17	-1862	-17	1862	intron_retention	FALSE	canonical	1	1363	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-31	False	AATAAA	-31
PB.9966.1	chr6	+	2690	6	full-splice_match	PIM1	ENST00000373509.5	2650	6	-40	0	-40	0	multi-exon	FALSE	canonical	1	460216	junction_1	170533.363457829	NA	17	NA	TRUE	NA	NA	NA	C	coding	313	942	414	1355	20.0	-5068	False	AATAAA	-14
PB.9966.2	chr6	+	2168	6	full-splice_match	PIM1	ENST00000373509.5	2650	6	-18	500	-18	-500	multi-exon	FALSE	canonical	1	460216	junction_1	170533.363457829	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	392	1333	10.0	7	True	AAAAAG	-42
PB.7633.2	chr22	+	2348	13	novel_in_catalog	P2RX6	novel	242	3	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	1	3614	junction_12	9860.87169912816	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	209	1504	10.0	NA	False	AGTAAA	-17
PB.7633.3	chr22	+	2242	12	novel_not_in_catalog	P2RX6	novel	242	3	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	454	junction_11	13723.767998718306	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	508	1380	15.0	NA	False	AGTAAA	-19
PB.7633.1	chr22	+	2756	12	full-splice_match	P2RX6	ENST00000413302.6	3687	12	110	821	-16	1	multi-exon	FALSE	canonical	1	11835	junction_1	8116.017052310106	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	69	1364	5.0	NA	False	AGTAAA	-15
PB.7633.6	chr22	+	2127	12	novel_in_catalog	P2RX6	novel	242	3	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	3614	junction_11	11676.850410283256	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	410	1282	15.0	NA	False	AGTAAA	-18
PB.7633.4	chr22	+	2315	14	novel_not_in_catalog	P2RX6	novel	242	3	NA	NA	25	2	any annotated donor/acceptor	FALSE	canonical	1	88	junction_1	12524.89517607224	NA	3	1	TRUE	NA	NA	NA	C	coding	104	315	1267	1581	10.0	NA	False	AGTAAA	-16
PB.7633.5	chr22	+	3425	11	novel_in_catalog	P2RX6	novel	242	3	NA	NA	-10	0	intron_retention	FALSE	canonical	1	3540	junction_1	9682.162679897503	NA	15	3	TRUE	NA	NA	NA	C	coding	104	315	1824	2138	15.0	NA	False	AGTAAA	-19
PB.8214.5	chr3	+	2024	10	incomplete-splice_match	SLC25A26	ENST00000354883.10	2673	11	87398	8	-4	-8	5prime_fragment	FALSE	canonical	1	80991	junction_1	85512.75522501214	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	88	912	35.0	7	True	AATAAA	-14
PB.8774.7	chr4	-	3981	6	full-splice_match	SGCB	ENST00000381431.9	4431	6	183	267	-54	-267	multi-exon	FALSE	canonical	1	215336	junction_5	102160.11330847279	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	41	997	35.0	-29	True	AATAAA	-25
PB.1718.8	chr10	-	3265	5	full-splice_match	BNIP3	ENST00000540159.3	3066	5	-48	-151	-4	151	multi-exon	FALSE	canonical	1	351377	junction_1	54090.68978345534	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	166	708	40.0	-4	True	AATAAA	-22
PB.1718.9	chr10	-	1170	6	full-splice_match	BNIP3	ENST00000368636.8	2861	6	67	1624	19	149	multi-exon	FALSE	canonical	1	116557	junction_1	135179.48728324132	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	141	725	40.0	65	False	AATAAA	-20
PB.1605.1	chr10	-	1862	2	full-splice_match	MRPL43	ENST00000487059.1	810	2	53	-1105	-4	791	multi-exon	FALSE	canonical	1	679508	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	18	611	40.0	36	True	NA	NA
PB.5956.1	chr19	+	2992	3	full-splice_match	ZNF345	ENST00000420450.5	1971	3	-35	-986	-21	13	multi-exon	FALSE	canonical	1	28301	junction_2	5607.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	488	1467	236	1702	10.0	-21	True	ATTAAA	-36
PB.8774.8	chr4	-	2959	6	full-splice_match	SGCB	ENST00000381431.9	4431	6	202	1270	-35	-1270	multi-exon	FALSE	canonical	1	215336	junction_5	102160.11330847279	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	22	978	60.0	-10	True	AGTAAA	-10
PB.6693.7	chr2	+	5103	18	novel_not_in_catalog	TMEM87B	novel	5212	19	NA	NA	52	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	83190.5517924742	NA	2	NA	TRUE	NA	NA	NA	B	coding	538	1617	318	1934	30.0	6	True	AATAAA	-16
PB.1718.1	chr10	-	2814	6	full-splice_match	BNIP3	ENST00000368636.8	2861	6	57	-10	9	10	multi-exon	FALSE	canonical	1	116557	junction_1	135179.48728324132	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	151	735	20.0	11	True	ATTAAA	-27
PB.1718.2	chr10	-	2388	6	full-splice_match	BNIP3	ENST00000368636.8	2861	6	29	444	-17	-444	multi-exon	FALSE	canonical	1	116557	junction_1	135179.48728324132	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	179	763	95.0	-17	True	NA	NA
PB.1718.3	chr10	-	3658	5	full-splice_match	BNIP3	ENST00000540159.3	3066	5	-49	-543	-5	543	multi-exon	FALSE	canonical	1	351377	junction_1	54090.68978345534	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	167	709	30.0	-5	True	AATAAA	-20
PB.1718.4	chr10	-	1535	6	full-splice_match	BNIP3	ENST00000368636.8	2861	6	58	1268	10	505	multi-exon	FALSE	canonical	1	116557	junction_1	135179.48728324132	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	150	734	75.0	12	True	TTTAAA	-8
PB.1718.5	chr10	-	3683	4	novel_in_catalog	BNIP3	novel	2861	6	NA	NA	0	541	intron_retention	FALSE	canonical	1	414314	junction_2	31678.21102903382	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	118	510	35.0	-1	True	AATAAA	-18
PB.1718.6	chr10	-	2995	6	full-splice_match	BNIP3	ENST00000633835.1	1062	6	30	-1963	-14	541	multi-exon	FALSE	canonical	1	5197	junction_1	177490.36636775528	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	132	701	35.0	74	False	AATAAA	-18
PB.1718.7	chr10	-	2246	5	novel_in_catalog	BNIP3	novel	2861	6	NA	NA	9	541	intron_retention	FALSE	canonical	1	116557	junction_1	148998.03204468003	NA	0	NA	TRUE	NA	NA	NA	C	coding	66	201	151	351	35.0	11	True	AATAAA	-18
PB.3758.14	chr15	-	5452	24	novel_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-28	4	combination_of_known_junctions	FALSE	canonical	1	1046	junction_17	123579.90882928061	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	1287	3098	20.0	4773	False	ATTAAA	-15
PB.1784.2	chr11	-	1571	1	novel_in_catalog	CAVIN3	novel	1174	2	NA	NA	13	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	191	576	44	619	35.0	-19	True	AATAAA	-14
PB.1784.1	chr11	-	1067	2	full-splice_match	CAVIN3	ENST00000303927.3	1174	2	105	2	-10	-2	multi-exon	FALSE	canonical	1	406734	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	67	852	35.0	77	False	AATAAA	-15
PB.2298.3	chr11	+	2408	15	full-splice_match	RNF214	ENST00000300650.8	2755	15	13	334	13	106	multi-exon	FALSE	canonical	1	42980	junction_1	50573.436368335126	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	96	2207	15.0	-57	True	AATGAA	-32
PB.2298.4	chr11	+	2678	16	novel_not_in_catalog	RNF214	novel	548	3	NA	NA	21	-10	intron_retention	TRUE	non_canonical	0	0	junction_15	69019.49379787971	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	88	2199	60.0	-49	True	GATAAA	-19
PB.3758.11	chr15	-	6506	23	novel_not_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-19	4	intron_retention	FALSE	canonical	1	1046	junction_16	126126.22828683005	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	2773	4152	20.0	-15	True	ATTAAA	-15
PB.3758.13	chr15	-	5934	24	novel_not_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-5	4	any annotated donor/acceptor	FALSE	canonical	1	818	junction_14	123589.32821770797	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	2198	3580	20.0	-5	True	ATTAAA	-15
PB.7518.4	chr21	-	3006	7	full-splice_match	VPS26C	ENST00000476950.5	937	7	-21	-2048	-16	-4	multi-exon	FALSE	canonical	1	35666	junction_4	129732.63037590042	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	74	886	25.0	186	False	AATAAA	-18
PB.7518.5	chr21	-	2760	6	novel_in_catalog	VPS26C	novel	5648	2	NA	NA	-5	-4	no_combination_of_known_junctions	FALSE	canonical	1	2624	junction_5	168568.65028064977	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	41	640	25.0	-1	True	AATAAA	-18
PB.7518.7	chr21	-	2546	4	novel_not_in_catalog	VPS26C	novel	5648	2	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	146536.42044442968	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	27	392	25.0	13	True	AATAAA	-18
PB.3758.18	chr15	-	4563	23	novel_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-1	-255	intron_retention	FALSE	canonical	1	1046	junction_16	125883.17460960934	NA	2	NA	TRUE	NA	NA	NA	C	coding	460	1383	2763	4145	20.0	-1	True	GATAAA	-18
PB.3758.19	chr15	-	3996	24	novel_not_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-14	-255	any annotated donor/acceptor	FALSE	canonical	1	818	junction_14	123809.14333092076	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	2199	3578	20.0	-10	True	GATAAA	-18
PB.831.4	chr1	-	2573	4	full-splice_match	ISG20L2	ENST00000368219.1	2310	4	360	-623	2	-89	multi-exon	FALSE	canonical	1	108041	junction_3	188888.98985794687	NA	4	NA	TRUE	NA	NA	NA	C	coding	353	1062	143	1204	20.0	5	True	TATAAA	-8
PB.7518.3	chr21	-	3891	8	full-splice_match	VPS26C	ENST00000309117.10	3256	8	144	-779	15	779	multi-exon	FALSE	canonical	1	296255	junction_7	58409.297192575534	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	95	988	60.0	165	False	NA	NA
PB.5271.6	chr17	-	3732	19	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	9911	junction_18	46740.88808910272	NA	0	NA	TRUE	NA	NA	NA	B	coding	827	2484	513	2996	30.0	0	True	ATTAAA	-17
PB.4364.3	chr16	-	2398	1	novel_in_catalog	SMG1P5	novel	4219	29	NA	NA	11392	-36242	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	26	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.5271.4	chr17	-	3455	19	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	3037	junction_18	47963.34964581721	NA	0	NA	TRUE	NA	NA	NA	B	coding	827	2484	234	2717	30.0	-2	True	ATTAAA	-19
PB.5271.5	chr17	-	4039	18	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	1	-1	intron_retention	TRUE	canonical	1	24282	junction_17	44955.777454744944	NA	5	NA	TRUE	NA	NA	NA	B	coding	637	1914	655	2568	30.0	52	True	ATTAAA	-17
PB.5271.2	chr17	-	3664	19	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	209	-3	combination_of_known_junctions	FALSE	canonical	1	24282	junction_18	44257.12248045505	NA	8	NA	TRUE	NA	NA	NA	B	coding	827	2484	447	2930	25.0	260	False	ATTAAA	-15
PB.5271.3	chr17	-	3582	19	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	17346	junction_8	50431.48334374075	NA	1	NA	TRUE	NA	NA	NA	B	coding	458	1377	291	1667	30.0	-1	True	ATTAAA	-19
PB.5271.1	chr17	-	3622	20	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	0	5	combination_of_known_junctions	TRUE	canonical	1	9911	junction_19	54949.60820722404	NA	1	NA	TRUE	NA	NA	NA	B	coding	827	2484	392	2875	30.0	-1	True	ATTAAA	-28
PB.406.5	chr1	+	3587	6	full-splice_match	BTF3L4	ENST00000313334.12	4703	6	170	946	-9	-946	multi-exon	FALSE	canonical	1	1261	junction_4	56795.96941826066	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	99	575	20.0	0	True	AGTAAA	-13
PB.10960.1	chr8	+	1454	10	full-splice_match	FBXO25	ENST00000350302.7	2229	10	138	637	-9	-637	multi-exon	FALSE	canonical	1	126636	junction_1	68724.53647068935	NA	0	NA	TRUE	NA	NA	NA	A	coding	358	1077	129	1205	20.0	-12	True	ATTAAA	-16
PB.8214.3	chr3	+	1876	9	full-splice_match	SLC25A26	ENST00000336733.10	1023	9	-13	-840	-13	-8	multi-exon	FALSE	canonical	1	96643	junction_1	81035.07280945934	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	213	764	35.0	-2	True	AATAAA	-14
PB.5271.8	chr17	-	3509	19	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	60210	junction_18	38580.56385776824	NA	1	NA	TRUE	NA	NA	NA	B	coding	827	2484	291	2774	25.0	-1	True	ATTAAA	-16
PB.5271.9	chr17	-	3987	20	novel_in_catalog	RHBDF2	novel	2665	12	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	5499	junction_19	55551.28509415591	NA	1	1	TRUE	NA	NA	NA	B	coding	827	2484	769	3252	25.0	39	True	ATTAAA	-16
PB.2519.10	chr12	+	4171	15	novel_in_catalog	STK38L	novel	545	5	NA	NA	-2	-867	combination_of_known_junctions	FALSE	canonical	1	17571	junction_2	127517.49671759734	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	296	1534	20.0	-40	True	ATTAAA	-18
PB.2519.11	chr12	+	4014	13	novel_in_catalog	STK38L	novel	545	5	NA	NA	-2	-873	no_combination_of_known_junctions	FALSE	canonical	1	7987	junction_7	106260.196404732	NA	3	NA	TRUE	NA	NA	NA	C	coding	226	681	98	778	35.0	-40	True	ATTAAA	-12
PB.2519.12	chr12	+	4316	15	novel_not_in_catalog	STK38L	novel	545	5	NA	NA	0	-873	any annotated donor/acceptor	FALSE	canonical	1	3039	junction_1	129184.46653455023	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	297	1685	35.0	-38	True	ATTAAA	-12
PB.2519.13	chr12	+	4655	12	novel_in_catalog	STK38L	novel	545	5	NA	NA	1	-859	intron_retention	FALSE	canonical	1	182244	junction_1	62324.57921648888	NA	6	NA	TRUE	NA	NA	NA	C	coding	225	678	95	772	15.0	-37	True	ATTAAA	-26
PB.2519.14	chr12	+	2694	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	81	2293	1	732	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	95	1483	20.0	-37	True	ATTAAA	-14
PB.2519.15	chr12	+	4062	13	novel_in_catalog	STK38L	novel	545	5	NA	NA	-6	-868	no_combination_of_known_junctions	FALSE	canonical	1	552	junction_2	114620.45443174131	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	383	1426	20.0	-32	True	ATTAAA	-17
PB.2519.16	chr12	+	4522	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	93	453	1	-453	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	10	NA	TRUE	NA	NA	NA	C	coding	462	1389	83	1471	20.0	-25	True	AATAAA	-15
PB.2519.17	chr12	+	4245	15	novel_in_catalog	STK38L	novel	545	5	NA	NA	1	-859	combination_of_known_junctions	FALSE	canonical	1	3673	junction_1	128273.40520655758	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	212	1600	15.0	-25	True	ATTAAA	-26
PB.2519.18	chr12	+	4040	15	novel_in_catalog	STK38L	novel	545	5	NA	NA	1	-983	combination_of_known_junctions	FALSE	canonical	1	17571	junction_2	127517.49671759734	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	281	1519	15.0	-25	True	ATTAAA	-14
PB.2519.19	chr12	+	4308	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	96	664	4	-664	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	80	1468	30.0	-22	True	ATTAAA	-24
PB.7781.1	chr22	-	3662	5	novel_in_catalog	JOSD1	novel	3648	4	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	4391	junction_4	218899.9152009886	NA	2	1	TRUE	NA	NA	NA	B	coding	202	609	699	1307	25.0	4343	False	AATAAA	-24
PB.10467.4	chr7	+	2875	13	full-splice_match	PLEKHA8	ENST00000396259.5	2840	13	-45	10	4	4	multi-exon	FALSE	canonical	1	4224	junction_4	9016.411304147317	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	368	1687	60.0	-16	True	AATAAA	-7
PB.10467.5	chr7	+	3753	14	novel_in_catalog	PLEKHA8	novel	563	5	NA	NA	103	-3958	combination_of_known_junctions	FALSE	canonical	1	4224	junction_4	9026.527201178174	NA	9	1	TRUE	NA	NA	NA	C	coding	305	918	921	1838	15.0	-107	False	ATTAAA	-20
PB.11438.11	chr9	+	2717	16	incomplete-splice_match	JAK2	ENST00000381652.3	5285	25	47	49600	47	139	3prime_fragment	FALSE	canonical	1	44852	junction_1	39073.660160949	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	454	2589	35.0	20	True	AATAAA	-20
PB.11438.10	chr9	+	7019	25	full-splice_match	JAK2	ENST00000381652.3	5285	25	24	-1758	24	1758	multi-exon	FALSE	canonical	1	44852	junction_1	46776.506132589915	NA	3	NA	TRUE	NA	NA	NA	C	coding	1130	3393	477	3869	45.0	-3	True	AATAAA	-14
PB.3966.2	chr15	-	4053	5	incomplete-splice_match	NPTN	ENST00000562924.5	1094	8	-134	6191	36	3203	3prime_fragment	FALSE	canonical	1	899792	junction_4	267471.0366276833	NA	0	NA	TRUE	NA	NA	NA	B	coding	262	789	163	951	95.0	0	True	NA	NA
PB.3966.1	chr15	-	7290	4	novel_in_catalog	NPTN	novel	2444	9	NA	NA	37	3203	intron_retention	FALSE	canonical	1	899792	junction_3	305820.5781707089	NA	1	NA	TRUE	NA	NA	NA	B	coding	205	618	162	779	95.0	1	True	NA	NA
PB.10467.3	chr7	+	4531	14	full-splice_match	PLEKHA8	ENST00000449726.5	7835	14	21	3283	-10	-3283	multi-exon	FALSE	canonical	1	4224	junction_4	8740.141281541264	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	382	1941	55.0	-30	True	AATAAA	-16
PB.7781.3	chr22	-	2315	1	incomplete-splice_match	JOSD1	ENST00000216039.9	3648	4	12731	79	1387	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	174	525	397	921	15.0	-6081	False	ATTAAA	-14
PB.8686.1	chr4	-	2128	1	full-splice_match	MRFAP1L1	ENST00000500563.2	2127	1	-47	46	6	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	127	384	246	629	20.0	-10	True	AATAAA	-15
PB.11275.17	chr8	-	2911	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	808730.995599639	NA	8	1	TRUE	NA	NA	NA	C	coding	245	738	103	840	15.0	0	True	AATAAA	-11
PB.11275.12	chr8	-	2651	5	full-splice_match	YWHAZ	ENST00000521309.5	1399	5	0	-1252	0	0	multi-exon	FALSE	canonical	1	8838	junction_4	885995.4492745716	NA	7	NA	TRUE	NA	NA	NA	C	coding	125	378	158	535	10.0	0	True	AATAAA	-13
PB.1611.9	chr10	-	2681	5	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	-23	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	351410.13027693157	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	128	676	10.0	0	True	AATAAA	-17
PB.11275.10	chr8	-	2938	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	-25	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	808730.995599639	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	128	865	10.0	-1	True	AATAAA	-13
PB.11275.11	chr8	-	2813	6	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	-25	0	intron_retention	FALSE	canonical	1	6068	junction_5	819014.6512366186	NA	4	NA	TRUE	NA	NA	NA	C	coding	168	507	191	697	10.0	-1	True	AATAAA	-13
PB.1611.4	chr10	-	5289	17	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	-20	-2	any annotated donor/acceptor	FALSE	canonical	1	2571	junction_6	293742.24987454456	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	417	2480	15.0	3	True	AATAAA	-18
PB.1611.5	chr10	-	5104	15	novel_in_catalog	OGA	novel	5155	16	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	1	64272	junction_5	255971.56133729796	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	434	2434	15.0	-14	True	AATAAA	-18
PB.1611.6	chr10	-	5078	15	novel_in_catalog	OGA	novel	5155	16	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	1	11336	junction_10	255971.0902903462	NA	2	NA	TRUE	NA	NA	NA	C	coding	883	2652	421	3072	15.0	-1	True	AATAAA	-18
PB.1611.1	chr10	-	3400	8	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	91	-1	any annotated donor/acceptor	FALSE	canonical	1	775	junction_5	359881.19205166947	NA	7	NA	TRUE	NA	NA	NA	C	coding	182	549	845	1393	15.0	166	False	AATAAA	-19
PB.1611.2	chr10	-	5175	16	full-splice_match	OGA	ENST00000361464.7	5155	16	-24	4	23	-4	multi-exon	FALSE	canonical	1	409086	junction_15	189164.53566581188	NA	11	NA	TRUE	NA	NA	NA	C	coding	916	2751	421	3171	5.0	-1	True	AATAAA	-16
PB.646.2	chr1	+	4952	13	full-splice_match	MAN1A2	ENST00000356554.7	8576	13	103	3521	103	-1	multi-exon	FALSE	canonical	1	164367	junction_10	225100.74180444123	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	633	2558	15.0	-882	False	ATTAAA	-15
PB.6443.28	chr2	-	3195	29	incomplete-splice_match	LRPPRC	ENST00000260665.11	6335	38	2	31526	2	-21590	3prime_fragment	FALSE	canonical	1	374963	junction_28	224706.95180892586	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3138	57	3194	65.0	1	True	NA	NA
PB.9480.18	chr5	-	2103	17	full-splice_match	HSPA9	ENST00000297185.8	2825	17	-15	737	0	-25	multi-exon	FALSE	canonical	1	478276	junction_10	650464.7146484965	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2004	99	2102	65.0	-16	True	NA	NA
PB.9480.19	chr5	-	1784	14	incomplete-splice_match	HSPA9	ENST00000297185.8	2825	17	-15	2109	0	-102	3prime_fragment	FALSE	canonical	1	478276	junction_7	519914.53685336	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1686	99	1784	55.0	-16	True	NA	NA
PB.9480.13	chr5	-	2317	17	full-splice_match	HSPA9	ENST00000297185.8	2825	17	19	489	19	3	multi-exon	FALSE	canonical	1	478276	junction_10	650464.7146484965	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	65	2104	15.0	18	True	TATAAA	-20
PB.7276.1	chr20	-	2665	1	incomplete-splice_match	SOGA1	ENST00000237536.8	14371	15	83573	7	36168	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	161	486	645	1130	20.0	3542	False	AATAAA	-13
PB.9480.11	chr5	-	2742	16	novel_in_catalog	HSPA9	novel	4727	17	NA	NA	0	-5	no_combination_of_known_junctions	FALSE	canonical	1	30885	junction_8	774008.470388449	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	99	2045	10.0	-16	True	AATAAA	-13
PB.9480.16	chr5	-	2254	16	novel_in_catalog	HSPA9	novel	4727	17	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	30885	junction_8	774008.470388449	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	99	2045	10.0	-16	True	TATAAA	-16
PB.9480.17	chr5	-	2290	17	full-splice_match	HSPA9	ENST00000297185.8	2825	17	-16	551	-1	-59	multi-exon	FALSE	canonical	1	478276	junction_10	650464.7146484965	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	100	2139	30.0	-17	True	NA	NA
PB.9480.14	chr5	-	2837	16	novel_in_catalog	HSPA9	novel	4727	17	NA	NA	29	-2	intron_retention	FALSE	canonical	1	478276	junction_9	553367.8049157861	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	55	1833	15.0	28	True	TATAAA	-15
PB.3837.1	chr15	+	4700	5	novel_in_catalog	TRIM69	novel	2486	8	NA	NA	-25	0	intron_retention	FALSE	canonical	1	26645	junction_2	6320.443042224177	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	3992	4645	20.0	0	True	ATTAAA	-18
PB.6443.24	chr2	-	7437	37	novel_in_catalog	LRPPRC	novel	6335	38	NA	NA	-3	-219	intron_retention	FALSE	canonical	1	374963	junction_36	274188.5350456308	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	4924	7335	20.0	-4	True	AATAAA	-18
PB.7355.1	chr20	+	1177	5	full-splice_match	BCAS4	ENST00000371608.6	6680	5	9	5494	9	5	multi-exon	FALSE	canonical	1	169422	junction_1	65857.96425025222	NA	0	NA	TRUE	NA	NA	NA	A	coding	173	522	82	603	20.0	-58	False	AATAAA	-21
PB.10477.3	chr7	-	1714	10	full-splice_match	NT5C3A	ENST00000456458.5	1742	10	27	1	7	-1	multi-exon	FALSE	canonical	1	71352	junction_4	96641.19165012172	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	222	1115	35.0	6	True	AATAAA	-23
PB.3958.1	chr15	+	2151	16	full-splice_match	LRRC49	ENST00000260382.9	2784	16	191	442	-19	-1	multi-exon	FALSE	canonical	1	49463	junction_3	16476.29225200055	NA	1	NA	TRUE	NA	NA	NA	A	coding	686	2061	70	2130	15.0	0	True	AATAAA	-21
PB.10477.1	chr7	-	1665	9	full-splice_match	NT5C3A	ENST00000610140.6	1667	9	0	2	0	-2	multi-exon	FALSE	canonical	1	14074	junction_8	54965.96602202471	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	207	1067	40.0	-1	True	AATAAA	-22
PB.11633.22	chr9	+	5588	25	incomplete-splice_match	DAPK1	ENST00000622514.4	5772	26	517	0	46	0	5prime_fragment	FALSE	canonical	1	158807	junction_13	30194.21848034635	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	27	4319	20.0	314	False	AATAAA	-18
PB.10477.7	chr7	-	3115	9	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	71352	junction_3	101915.93637405291	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	57	674	40.0	-9	True	AATAAA	-21
PB.10477.6	chr7	-	4087	7	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	3	-3	intron_retention	FALSE	canonical	1	14074	junction_6	62366.51366897321	NA	6	NA	TRUE	NA	NA	NA	C	coding	194	585	224	808	40.0	0	True	AATAAA	-21
PB.1972.8	chr11	+	2233	17	novel_in_catalog	TKFC	novel	4696	18	NA	NA	0	22	no_combination_of_known_junctions	FALSE	canonical	1	851	junction_1	94679.77408942736	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	19	1824	45.0	-10	True	AATAAA	-14
PB.1972.9	chr11	+	2403	18	novel_in_catalog	TKFC	novel	4696	18	NA	NA	2	26	combination_of_known_junctions	FALSE	canonical	1	26440	junction_17	96851.55579234607	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	207	1811	35.0	-8	True	AATAAA	-18
PB.1972.6	chr11	+	2349	18	full-splice_match	TKFC	ENST00000394900.7	4696	18	21	2326	0	26	multi-exon	FALSE	canonical	1	111921	junction_1	74062.56339802522	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	209	1936	35.0	-10	True	AATAAA	-18
PB.1972.7	chr11	+	2259	17	novel_in_catalog	TKFC	novel	4696	18	NA	NA	0	26	no_combination_of_known_junctions	FALSE	canonical	1	9415	junction_6	103583.72142069126	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	209	1846	35.0	-10	True	AATAAA	-18
PB.1972.4	chr11	+	2849	18	full-splice_match	TKFC	ENST00000394900.7	4696	18	9	1838	-1	514	multi-exon	FALSE	canonical	1	111921	junction_1	74062.56339802522	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	221	1948	20.0	-22	True	NA	NA
PB.1972.5	chr11	+	2235	17	novel_in_catalog	TKFC	novel	4696	18	NA	NA	-3	26	no_combination_of_known_junctions	FALSE	canonical	1	9102	junction_10	102039.57832778661	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	212	1822	35.0	-13	True	AATAAA	-18
PB.1972.2	chr11	+	4212	18	full-splice_match	TKFC	ENST00000394900.7	4696	18	0	484	0	-484	multi-exon	FALSE	canonical	1	111921	junction_1	74062.56339802522	NA	5	NA	TRUE	NA	NA	NA	C	coding	575	1728	230	1957	25.0	-31	True	NA	NA
PB.1972.3	chr11	+	3652	17	novel_in_catalog	TKFC	novel	4696	18	NA	NA	-2	26	intron_retention	FALSE	canonical	1	185919	junction_4	58433.01361441578	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	1512	3239	35.0	-23	True	AATAAA	-18
PB.8599.20	chr3	+	4294	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	440	-2808	440	2808	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	151	1071	55.0	-154	False	AATAAA	-13
PB.1972.1	chr11	+	2481	19	novel_in_catalog	TKFC	novel	4696	18	NA	NA	-9	26	combination_of_known_junctions	FALSE	canonical	1	11423	junction_1	108980.85933369727	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	341	2068	35.0	-8003	False	AATAAA	-18
PB.5471.1	chr18	+	4463	12	novel_in_catalog	CTIF	novel	5750	12	NA	NA	-29	-11	intron_retention	FALSE	canonical	1	35798	junction_1	69851.85321334605	NA	1	NA	TRUE	NA	NA	NA	A	coding	600	1803	325	2127	10.0	-986	False	NA	NA
PB.7453.2	chr21	+	2843	4	intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	103	312	1271	1582	10.0	NA	False	NA	NA
PB.6443.22	chr2	-	4267	37	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	0	-219	any annotated donor/acceptor	FALSE	canonical	1	11928	junction_21	346663.762224544	NA	1	NA	TRUE	NA	NA	NA	C	coding	1368	4107	59	4165	20.0	-1	True	AATAAA	-18
PB.11769.8	chr9	-	2550	6	full-splice_match	RBM18	ENST00000417201.3	4974	6	48	2376	3	1670	multi-exon	FALSE	canonical	1	264840	junction_2	32179.948280878267	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	94	666	15.0	-4	True	AATAAA	-23
PB.12213.4	chrX	-	3093	2	full-splice_match	TSC22D3	ENST00000503515.1	551	2	1	-2543	1	-6	multi-exon	FALSE	canonical	1	1621419	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	251	577	40.0	0	True	AATAAA	-18
PB.4731.1	chr17	-	2354	1	antisense	novelGene_KCTD11_AS_novelGene_ACAP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	199	600	1582	2181	20.0	2942	False	NA	NA
PB.11602.1	chr9	+	1193	4	full-splice_match	C9orf85	ENST00000334731.6	1279	4	82	4	-14	-4	multi-exon	FALSE	canonical	1	93762	junction_2	18486.703714351628	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	109	582	25.0	-12	True	AATAAA	-12
PB.12213.7	chrX	-	2176	4	full-splice_match	TSC22D3	ENST00000315660.8	2213	4	28	9	28	-6	multi-exon	FALSE	canonical	1	4900	junction_3	878703.8938157092	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	285	887	40.0	-1	True	AATAAA	-18
PB.10861.8	chr7	-	5103	4	full-splice_match	CYREN	ENST00000424142.5	1738	4	-46	-3319	-12	3316	multi-exon	FALSE	canonical	1	170583	junction_3	118571.87564323825	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	650	958	25.0	-1	True	NA	NA
PB.4716.27	chr17	+	2158	2	incomplete-splice_match	XAF1	ENST00000571135.5	565	5	-19	286	3	-286	intron_retention	FALSE	canonical	1	189887	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	94	285	22	306	30.0	12	True	NA	NA
PB.11584.13	chr9	+	2817	15	novel_not_in_catalog	CBWD5	novel	541	4	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	1137.956627343189	NA	42	6	TRUE	NA	NA	NA	C	coding	113	342	80	421	35.0	NA	False	ATTAAA	-13
PB.12213.9	chrX	-	2075	4	novel_in_catalog	TSC22D3	novel	1812	3	NA	NA	22	-6	no_combination_of_known_junctions	FALSE	canonical	1	611	junction_3	879817.6386141998	NA	4	1	TRUE	NA	NA	NA	C	coding	200	603	184	786	40.0	-137	False	AATAAA	-18
PB.11584.11	chr9	+	1745	16	novel_in_catalog	CBWD5	novel	541	4	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1104.8853253719244	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	83	625	30.0	NA	False	ATTAAA	-14
PB.11584.10	chr9	+	2056	19	novel_in_catalog	CBWD5	novel	541	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1018.8185423431505	NA	6	2	TRUE	NA	NA	NA	C	coding	144	435	289	723	35.0	NA	False	ATTAAA	-13
PB.7520.1	chr21	-	3902	1	intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	124	375	186	560	20.0	-38	True	AATAAA	-18
PB.10163.21	chr6	-	2137	13	novel_not_in_catalog	REV3L	novel	10644	34	NA	NA	-6	11196	intron_retention	FALSE	canonical	1	6667	junction_5	40452.98765121956	NA	2	1	TRUE	NA	NA	NA	C	coding	602	1806	330	2135	75.0	-2	True	NA	NA
PB.10163.22	chr6	-	2254	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	502	77502	-2	11192	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1566	688	2253	70.0	2	True	NA	NA
PB.4159.1	chr16	-	1213	10	full-splice_match	HAGH	ENST00000397353.6	1257	10	42	2	3	0	multi-exon	FALSE	canonical	1	30375	junction_9	340585.9892282965	NA	1	NA	TRUE	NA	NA	NA	A	coding	260	783	253	1035	20.0	2	True	NA	NA
PB.7688.8	chr22	-	2416	20	full-splice_match	THOC5	ENST00000397871.5	2560	20	-18	162	7	-1	multi-exon	FALSE	canonical	1	21880	junction_19	112071.2656016801	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	238	2289	10.0	1	True	ATTAAA	-13
PB.9064.2	chr4	+	4804	13	incomplete-splice_match	CLCN3	ENST00000347613.8	3635	14	113	757	87	-490	3prime_fragment	FALSE	canonical	1	74822	junction_12	113907.72419143586	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	442	2913	25.0	-4	True	AATAAA	-18
PB.583.14	chr1	+	3940	6	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	0	979	intron_retention	FALSE	canonical	1	94902	junction_2	235584.56929518963	NA	4	1	TRUE	NA	NA	NA	C	coding	349	1050	2547	3596	10.0	0	True	AATAAA	-13
PB.215.1	chr1	+	2132	9	full-splice_match	STX12	ENST00000373943.8	3079	9	-29	976	-29	-976	multi-exon	FALSE	canonical	1	277135	junction_1	69070.16076063526	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	155	985	20.0	-65	False	AATAAA	-19
PB.583.12	chr1	+	2712	6	full-splice_match	PRPF38B	ENST00000370025.8	3693	6	3	978	-1	-978	multi-exon	FALSE	canonical	1	311749	junction_4	144899.2900043337	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	267	1907	30.0	-1	True	ATTAAA	-18
PB.583.13	chr1	+	2254	6	full-splice_match	PRPF38B	ENST00000370025.8	3693	6	3	1436	-1	982	multi-exon	FALSE	canonical	1	311749	junction_4	144899.2900043337	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	267	1907	5.0	-1	True	AATAAA	-16
PB.215.4	chr1	+	3001	9	full-splice_match	STX12	ENST00000373943.8	3079	9	77	1	5	-1	multi-exon	FALSE	canonical	1	277135	junction_1	69070.16076063526	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	49	879	20.0	41	True	AATAAA	-22
PB.583.11	chr1	+	2031	5	full-splice_match	PRPF38B	ENST00000467302.5	2043	5	-2	14	1	-14	multi-exon	FALSE	canonical	1	66880	junction_1	166333.65402313357	NA	1	NA	TRUE	NA	NA	NA	C	coding	93	282	268	549	75.0	-2	True	NA	NA
PB.8455.5	chr3	-	1829	7	novel_in_catalog	PLSCR1	novel	2233	9	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	1	65156	junction_6	283170.8380338723	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	253	966	15.0	19	True	AATAAA	-16
PB.8455.4	chr3	-	2024	10	novel_in_catalog	PLSCR1	novel	2233	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	8455	junction_8	266040.6265788538	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	203	1159	20.0	0	True	AATAAA	-18
PB.8455.7	chr3	-	1948	8	full-splice_match	PLSCR1	ENST00000487389.5	1443	8	130	-635	13	-1	multi-exon	FALSE	canonical	1	65156	junction_7	225939.73633846236	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	150	1085	15.0	-1	True	AATAAA	-16
PB.8455.6	chr3	-	1535	7	full-splice_match	PLSCR1	ENST00000488253.5	581	7	-77	-877	13	-1	multi-exon	FALSE	canonical	1	4994	junction_3	295686.25623928744	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	AATAAA	-16
PB.8455.1	chr3	-	1753	8	full-splice_match	PLSCR1	ENST00000448787.6	996	8	17	-774	17	0	multi-exon	FALSE	canonical	1	90608	junction_5	209217.1051522454	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	176	889	20.0	3	True	AATAAA	-17
PB.8455.3	chr3	-	1784	9	full-splice_match	PLSCR1	ENST00000468985.5	983	9	-28	-773	-5	1	multi-exon	FALSE	canonical	1	8455	junction_7	302300.56764354475	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	205	918	25.0	23	True	AATAAA	-19
PB.8455.2	chr3	-	1902	9	full-splice_match	PLSCR1	ENST00000342435.8	2233	9	257	74	13	-73	multi-exon	FALSE	canonical	1	330513	junction_5	132391.8543169646	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	155	1111	40.0	-1	True	ATTAAA	-17
PB.8455.9	chr3	-	1679	9	full-splice_match	PLSCR1	ENST00000342435.8	2233	9	280	274	-6	-273	multi-exon	FALSE	canonical	1	330513	junction_5	132391.8543169646	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	132	1088	50.0	22	True	ATTAAA	-13
PB.2254.5	chr11	-	1926	8	full-splice_match	CASP1	ENST00000525825.5	1237	8	1	-690	-1	2	multi-exon	FALSE	canonical	1	49931	junction_6	135554.05027380277	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	36	1187	45.0	-6	True	AATAAA	-27
PB.8552.15	chr3	+	3179	9	novel_not_in_catalog	KLHL24	novel	2345	8	NA	NA	0	814	any annotated donor/acceptor	FALSE	canonical	1	3131	junction_6	96755.44723812712	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	296	2173	80.0	0	True	NA	NA
PB.10699.5	chr7	+	1755	8	novel_not_in_catalog	CPSF4	novel	1738	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	172327.8751914501	NA	1	1	TRUE	NA	NA	NA	C	coding	248	747	138	884	35.0	0	True	ATTAAA	-12
PB.6107.2	chr19	-	1988	11	novel_in_catalog	KPTN	novel	1691	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	105566	junction_7	16521.260679500218	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	1134	1724	15.0	-3	True	NA	NA
PB.6107.1	chr19	-	1701	12	full-splice_match	KPTN	ENST00000338134.7	1691	12	-10	0	-10	0	multi-exon	FALSE	canonical	1	105566	junction_8	16735.388282280088	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	122	1429	10.0	6792	False	NA	NA
PB.6144.1	chr19	+	2929	5	novel_in_catalog	BCL2L12	novel	1854	7	NA	NA	9	-5	intron_retention	FALSE	canonical	1	390743	junction_1	66207.50471245688	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-25	True	AATAAA	-33
PB.308.5	chr1	+	2440	4	full-splice_match	AKIRIN1	ENST00000531822.1	718	4	-222	-1500	-14	-178	multi-exon	FALSE	canonical	1	482	junction_3	197521.4833907666	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	108	614	10.0	-14	True	AATAAA	-11
PB.5106.2	chr17	+	3483	11	full-splice_match	XYLT2	ENST00000017003.6	3507	11	24	0	-19	0	multi-exon	FALSE	canonical	1	114658	junction_1	56007.67253189513	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2598	26	2623	0.0	-10	True	AATATA	-15
PB.5106.1	chr17	+	2547	10	incomplete-splice_match	XYLT2	ENST00000017003.6	3507	11	15	2373	15	461	3prime_fragment	FALSE	canonical	1	114658	junction_1	59000.29991637519	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	35	2332	10.0	-19	True	NA	NA
PB.308.6	chr1	+	2184	1	novel_in_catalog	AKIRIN1	novel	2741	5	NA	NA	-14	-10924	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	112	339	108	446	70.0	-14	True	NA	NA
PB.308.1	chr1	+	1642	5	full-splice_match	AKIRIN1	ENST00000432648.7	2741	5	48	1051	-17	154	multi-exon	FALSE	canonical	1	346640	junction_1	174229.70502669027	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	111	689	45.0	-17	True	NA	NA
PB.308.3	chr1	+	2234	6	novel_not_in_catalog	AKIRIN1	novel	2741	5	NA	NA	-15	-169	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	259547.18617499978	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	109	687	20.0	-15	True	AATAAA	-20
PB.308.2	chr1	+	2401	4	full-splice_match	AKIRIN1	ENST00000446189.6	1243	4	-16	-1142	-16	-156	multi-exon	FALSE	canonical	1	23951	junction_2	322522.8741390119	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	110	553	35.0	-16	True	AATAAA	-33
PB.5493.4	chr18	-	3589	11	novel_in_catalog	NARS	novel	3099	14	NA	NA	-22	0	intron_retention	FALSE	canonical	1	1161283	junction_10	253815.6826121073	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	130	993	10.0	-47	True	AATAAA	-20
PB.5493.5	chr18	-	3225	12	novel_in_catalog	NARS	novel	3099	14	NA	NA	1	0	intron_retention	FALSE	canonical	1	1161283	junction_11	269453.8643824358	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	91	954	10.0	-8	True	AATAAA	-20
PB.5493.6	chr18	-	3053	13	novel_in_catalog	NARS	novel	3099	14	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1161283	junction_12	244453.41021740047	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	86	1495	10.0	-3	True	AATAAA	-20
PB.5493.7	chr18	-	2696	14	full-splice_match	NARS	ENST00000256854.9	3099	14	399	4	2	-4	multi-exon	FALSE	canonical	1	1161283	junction_13	260435.39117147468	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	58	1704	15.0	25	True	AATAAA	-16
PB.308.9	chr1	+	2557	4	full-splice_match	AKIRIN1	ENST00000446189.6	1243	4	-12	-1302	-12	4	multi-exon	FALSE	canonical	1	23951	junction_2	322522.8741390119	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	106	549	20.0	-12	True	ATTAAA	-23
PB.5493.1	chr18	-	4248	15	novel_not_in_catalog	NARS	novel	3099	14	NA	NA	1	12046	any annotated donor/acceptor	FALSE	canonical	1	7485	junction_1	462571.98456571193	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	91	1839	40.0	-8	True	AATAAA	-20
PB.5493.2	chr18	-	4103	15	novel_not_in_catalog	NARS	novel	3099	14	NA	NA	8	11892	any annotated donor/acceptor	FALSE	canonical	1	7485	junction_1	462571.98456571193	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	100	1848	95.0	-17	True	NA	NA
PB.5493.3	chr18	-	2851	14	full-splice_match	NARS	ENST00000256854.9	3099	14	382	-134	1	134	multi-exon	FALSE	canonical	1	1161283	junction_13	260435.39117147468	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	75	1721	45.0	8	True	ACTAAA	-22
PB.10406.1	chr7	-	2065	4	full-splice_match	NDUFA4	ENST00000339600.5	2130	4	71	-6	-50	6	multi-exon	FALSE	canonical	1	1011577	junction_1	616663.7866493107	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-54	True	AATAAA	-21
PB.6459.12	chr2	-	2424	18	incomplete-splice_match	FBXO11	ENST00000403359.7	4055	23	259	5931	34	-2	3prime_fragment	FALSE	canonical	1	108882	junction_17	110781.39329355939	NA	0	NA	TRUE	NA	NA	NA	B	coding	686	2061	67	2127	20.0	940	False	AGTAAA	-17
PB.1457.18	chr10	-	2695	14	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	74	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	3806701.9871130246	NA	7	2	TRUE	NA	NA	NA	C	coding	248	747	809	1555	20.0	-3	True	AATAAA	-13
PB.2494.18	chr12	+	2840	11	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-28	-1699	any annotated donor/acceptor	FALSE	canonical	1	1132	junction_10	69513.56032897467	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	237	1763	100.0	-34	True	NA	NA
PB.2494.19	chr12	+	2337	11	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-28	-1699	any annotated donor/acceptor	FALSE	canonical	1	349	junction_10	69666.51994896831	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	237	1784	100.0	-34	True	NA	NA
PB.525.4	chr1	-	2587	12	novel_in_catalog	GBP4	novel	6127	11	NA	NA	53	-4	combination_of_known_junctions	FALSE	canonical	1	6847	junction_1	58501.63590931552	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	46	1968	35.0	-2	True	AATAAA	-14
PB.1258.2	chr1	+	4408	3	incomplete-splice_match	ZNF672	ENST00000306562.7	2989	4	-33	3	-33	-3	intron_retention	FALSE	canonical	1	209401	junction_1	65714.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	2169	3527	20.0	-1	True	AATAAA	-15
PB.1258.5	chr1	+	2853	4	novel_in_catalog	ZNF672	novel	555	4	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	1254	junction_1	141578.32109079725	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	615	1973	20.0	667	False	AATAAA	-14
PB.1258.4	chr1	+	2954	5	full-splice_match	ZNF672	ENST00000515369.5	500	5	-41	-2413	-41	-3	multi-exon	FALSE	canonical	1	422	junction_1	147878.71654247612	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	715	2073	20.0	625	False	AATAAA	-15
PB.11401.6	chr8	-	5274	37	novel_in_catalog	CPSF1	novel	789	6	NA	NA	15	-1	intron_retention	FALSE	canonical	1	254023	junction_36	183235.08883740037	NA	1	NA	TRUE	NA	NA	NA	C	coding	1011	3036	61	3096	25.0	-9	True	AAAACA	-24
PB.2494.10	chr12	+	2988	21	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	9953	junction_1	48323.84293211271	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2742	247	2988	75.0	-44	True	AGTAAA	-20
PB.2494.11	chr12	+	2907	20	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-38	-2116	combination_of_known_junctions	FALSE	canonical	1	9953	junction_1	49053.899239380116	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2661	247	2907	30.0	-44	True	ACTAAA	-38
PB.2494.12	chr12	+	1914	1	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-38	-15210	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-44	True	ATTAAA	-8
PB.2494.13	chr12	+	4412	25	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	508	junction_1	61420.209259642405	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	508	3534	35.0	-41	True	AATAAA	-14
PB.2494.14	chr12	+	4336	25	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	1	9953	junction_1	66135.13125469994	NA	1	NA	TRUE	NA	NA	NA	C	coding	1071	3216	244	3459	35.0	-41	True	AATAAA	-13
PB.2494.15	chr12	+	5711	11	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-33	-13100	intron_retention	FALSE	canonical	1	1944	junction_10	69355.4195506739	NA	4	NA	TRUE	NA	NA	NA	C	coding	520	1563	242	1804	30.0	-39	True	AGTAAA	-20
PB.2494.16	chr12	+	4401	11	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-32	-14409	intron_retention	FALSE	canonical	1	1944	junction_10	69355.4195506739	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	241	1803	50.0	-38	True	AATAAA	-14
PB.2494.17	chr12	+	3810	23	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-30	-249	no_combination_of_known_junctions	FALSE	canonical	1	5968	junction_9	62082.81900371751	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	239	3181	85.0	-36	True	NA	NA
PB.5483.3	chr18	+	2641	15	full-splice_match	ME2	ENST00000640967.1	2569	15	-45	-27	-8	2	multi-exon	FALSE	canonical	1	16043	junction_13	138408.84849583815	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	250	1692	20.0	0	True	AATAAA	-17
PB.5483.2	chr18	+	2087	16	full-splice_match	ME2	ENST00000321341.10	9415	16	334	6994	-12	240	multi-exon	FALSE	canonical	1	136573	junction_5	134332.27834847933	NA	1	NA	TRUE	NA	NA	NA	C	coding	584	1755	254	2008	5.0	-4	True	NA	NA
PB.5483.1	chr18	+	2582	16	full-splice_match	ME2	ENST00000321341.10	9415	16	469	6364	-25	3	multi-exon	FALSE	canonical	1	136573	junction_5	134332.27834847933	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	119	1873	20.0	84	False	AATAAA	-18
PB.6375.20	chr2	-	3600	17	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	3	-35	intron_retention	FALSE	canonical	1	74792	junction_16	118710.96510899646	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	51	2195	20.0	-1	True	AGTAAA	-19
PB.5483.4	chr18	+	4487	16	full-splice_match	ME2	ENST00000321341.10	9415	16	469	4459	-25	1908	multi-exon	FALSE	canonical	1	136573	junction_5	134332.27834847933	NA	4	NA	TRUE	NA	NA	NA	C	coding	584	1755	119	1873	20.0	84	False	AATAAA	-25
PB.11401.2	chr8	-	4537	37	novel_in_catalog	CPSF1	novel	789	6	NA	NA	30	-1	intron_retention	FALSE	canonical	1	254023	junction_36	187278.18136115416	NA	0	NA	TRUE	NA	NA	NA	C	coding	1305	3918	46	3963	25.0	6	True	AAAACA	-24
PB.525.5	chr1	-	4999	11	full-splice_match	GBP4	ENST00000355754.6	6127	11	0	1128	0	222	multi-exon	FALSE	canonical	1	129336	junction_6	35510.65960187167	NA	4	NA	TRUE	NA	NA	NA	C	coding	640	1923	99	2021	25.0	-6	True	NA	NA
PB.7499.1	chr21	-	3216	10	novel_in_catalog	TMEM50B	novel	695	4	NA	NA	-26	0	intron_retention	FALSE	canonical	1	6481	junction_3	148749.33873151077	NA	3	NA	TRUE	NA	NA	NA	C	coding	158	477	179	655	25.0	29	False	AATAAA	-45
PB.7499.2	chr21	-	3093	9	full-splice_match	TMEM50B	ENST00000420455.5	3062	9	-31	0	-26	0	multi-exon	FALSE	canonical	1	75568	junction_2	125000.03377199544	NA	3	NA	TRUE	NA	NA	NA	C	coding	158	477	179	655	25.0	29	False	AATAAA	-45
PB.11769.9	chr9	-	2702	7	novel_in_catalog	RBM18	novel	4974	6	NA	NA	21	1670	combination_of_known_junctions	FALSE	canonical	1	8975	junction_2	140347.21454030438	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	121	561	15.0	2	True	AATAAA	-23
PB.7499.3	chr21	-	3166	10	novel_in_catalog	TMEM50B	novel	695	4	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	55716	junction_2	138610.6917636943	NA	4	NA	TRUE	NA	NA	NA	C	coding	158	477	144	620	30.0	3	True	AATAAA	-43
PB.5130.4	chr17	+	1915	13	full-splice_match	SCPEP1	ENST00000262288.7	1942	13	29	-2	0	2	multi-exon	FALSE	canonical	1	495190	junction_1	144089.26560438055	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	27	1385	20.0	-19	True	NA	NA
PB.7499.4	chr21	-	2236	7	full-splice_match	TMEM50B	ENST00000542230.6	2375	7	136	3	61	-3	multi-exon	FALSE	canonical	1	203556	junction_4	96594.17406646912	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	80	556	20.0	128	False	AATAAA	-20
PB.5130.1	chr17	+	2353	13	novel_in_catalog	SCPEP1	novel	1942	13	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	17254	junction_9	236482.94855107358	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	48	1019	20.0	-40	True	NA	NA
PB.5130.2	chr17	+	1818	12	novel_in_catalog	SCPEP1	novel	1942	13	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	34220	junction_9	240350.89302975003	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	43	1287	25.0	-35	True	NA	NA
PB.5130.3	chr17	+	1658	13	full-splice_match	SCPEP1	ENST00000262288.7	1942	13	16	268	-8	-91	multi-exon	FALSE	canonical	1	495190	junction_1	144089.26560438055	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	40	1398	40.0	-32	True	AATAAA	-22
PB.987.1	chr1	+	1903	5	full-splice_match	TSEN15	ENST00000645668.1	1986	5	76	7	-3	-1	multi-exon	FALSE	canonical	1	49605	junction_4	177287.22418789798	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	30	545	40.0	-6	True	AATAAA	-12
PB.750.16	chr1	-	5001	20	novel_not_in_catalog	POGZ	novel	6152	17	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	504	junction_19	126125.28757968472	NA	0	NA	TRUE	NA	NA	NA	C	coding	1410	4233	466	4698	80.0	-30	True	TTTAAA	-32
PB.11293.14	chr8	-	3090	6	full-splice_match	LRP12	ENST00000424843.6	4092	6	-1	1003	-1	-978	multi-exon	FALSE	canonical	1	35820	junction_5	41711.722541271294	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	129	2651	60.0	-16	True	AATATA	-26
PB.11692.1	chr9	-	3338	2	full-splice_match	MRPL50	ENST00000374865.4	3332	2	-4	-2	-4	2	multi-exon	FALSE	canonical	1	575835	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	27	503	20.0	46	False	AATAAA	-18
PB.750.17	chr1	-	2152	7	full-splice_match	POGZ	ENST00000485040.5	2741	7	-314	903	-28	485	multi-exon	FALSE	canonical	1	59177	junction_6	119563.53528343089	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	344	1435	95.0	-50	True	NA	NA
PB.8552.11	chr3	+	7288	8	full-splice_match	KLHL24	ENST00000242810.10	2345	8	55	-4998	0	-1	multi-exon	FALSE	canonical	1	58526	junction_1	63009.553486202494	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	296	2098	25.0	0	True	AATAAA	-17
PB.7041.9	chr2	+	2208	3	incomplete-splice_match	MRPL44	ENST00000258383.3	1748	4	33	2435	33	-2435	3prime_fragment	FALSE	canonical	1	346278	junction_1	86820.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	280	843	37	879	25.0	-26	True	TATAAA	-15
PB.7041.8	chr2	+	3612	3	novel_in_catalog	MRPL44	novel	1748	4	NA	NA	16	-2	intron_retention	FALSE	canonical	1	519918	junction_1	48457.0	NA	5	NA	TRUE	NA	NA	NA	B	coding	185	558	2377	2934	35.0	-2534	False	AATAAA	-21
PB.6014.8	chr19	+	2802	15	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	1	265865	junction_13	582684.9829684333	NA	15	2	TRUE	NA	NA	NA	C	coding	766	2301	48	2348	75.0	-324	False	NA	NA
PB.7041.3	chr2	+	1924	4	novel_not_in_catalog	MRPL44	novel	1748	4	NA	NA	-6550	-2	any annotated donor/acceptor	FALSE	canonical	1	7470	junction_1	267356.882409179	NA	0	NA	TRUE	NA	NA	NA	B	coding	185	558	689	1246	35.0	0	True	AATAAA	-21
PB.7041.2	chr2	+	1717	4	novel_not_in_catalog	MRPL44	novel	1748	4	NA	NA	-6557	-1	any annotated donor/acceptor	FALSE	canonical	1	6553	junction_1	267784.4084047215	NA	0	NA	TRUE	NA	NA	NA	B	coding	318	957	82	1038	30.0	-9107	False	AATAAA	-22
PB.7041.1	chr2	+	1701	4	novel_not_in_catalog	MRPL44	novel	1748	4	NA	NA	-13199	-2	any annotated donor/acceptor	FALSE	canonical	1	1024	junction_1	270362.4726375069	NA	4	NA	TRUE	NA	NA	NA	B	coding	185	558	466	1023	35.0	-6649	False	AATAAA	-21
PB.1262.1	chr10	+	4927	1	genic	AL358216.1	novel	NA	NA	NA	NA	-3271	-962	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	211	636	817	1452	50.0	2	True	ATTAAA	-40
PB.11270.4	chr8	-	4436	11	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-43	1	intron_retention	FALSE	canonical	1	2937	junction_10	173933.19565859187	NA	10	1	TRUE	NA	NA	NA	C	coding	807	2424	516	2939	20.0	-11	True	AATAAA	-25
PB.7041.6	chr2	+	2562	6	novel_not_in_catalog	MRPL44	novel	1748	4	NA	NA	-6541	-2	any annotated donor/acceptor	FALSE	canonical	1	185	junction_2	257129.70556324293	NA	2	NA	TRUE	NA	NA	NA	B	coding	332	999	886	1884	35.0	-9091	False	AATAAA	-21
PB.7041.5	chr2	+	2038	5	novel_not_in_catalog	MRPL44	novel	1748	4	NA	NA	-6543	-2	any annotated donor/acceptor	FALSE	canonical	1	608	junction_1	285879.3273686469	NA	2	NA	TRUE	NA	NA	NA	B	coding	185	558	803	1360	35.0	7	True	AATAAA	-21
PB.7041.4	chr2	+	1863	4	novel_not_in_catalog	MRPL44	novel	1748	4	NA	NA	-6550	-3	any annotated donor/acceptor	FALSE	canonical	1	787	junction_1	270472.99322606437	NA	0	NA	TRUE	NA	NA	NA	B	coding	185	558	629	1186	30.0	0	True	AATAAA	-20
PB.4759.2	chr17	-	4687	23	full-splice_match	PER1	ENST00000317276.8	4707	23	20	0	20	0	multi-exon	FALSE	canonical	1	98328	junction_22	99643.79417411414	NA	1	NA	TRUE	NA	NA	NA	C	coding	1290	3873	219	4091	30.0	9973	False	GATAAA	-7
PB.724.12	chr1	+	2136	16	full-splice_match	TARS2	ENST00000606933.5	2162	16	13	13	2	-13	multi-exon	FALSE	canonical	1	79384	junction_7	75274.93062444864	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	19	1929	60.0	-2	True	AATGAA	-6
PB.7772.4	chr22	-	3549	10	novel_in_catalog	TMEM184B	novel	3611	9	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	1	29286	junction_2	208482.73515089927	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	161	1405	50.0	48	False	AATAAA	-16
PB.4759.1	chr17	-	3533	21	novel_not_in_catalog	PER1	novel	4707	23	NA	NA	17	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	136200.96416005102	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	172	2427	30.0	-10	True	GATAAA	-8
PB.11293.15	chr8	-	2024	6	full-splice_match	LRP12	ENST00000424843.6	4092	6	18	2050	0	137	multi-exon	FALSE	canonical	1	35820	junction_5	41711.722541271294	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1914	110	2023	55.0	3	True	NA	NA
PB.7772.3	chr22	-	3524	9	novel_not_in_catalog	TMEM184B	novel	3611	9	NA	NA	0	-7	any annotated donor/acceptor	TRUE	canonical	1	8674	junction_3	187870.98660450475	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	181	1353	20.0	-1	True	AATAAA	-43
PB.4759.4	chr17	-	2907	1	novel_in_catalog	PER1	novel	3115	18	NA	NA	-2	-3195	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	158	477	1862	2338	70.0	-29	True	NA	NA
PB.7772.1	chr22	-	3565	9	full-splice_match	TMEM184B	ENST00000361906.7	3611	9	22	24	-2	-3	multi-exon	FALSE	canonical	1	182540	junction_8	119517.40003656372	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	188	1411	45.0	-8	True	AATAAA	-26
PB.10235.45	chr6	+	4403	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-177	-6	intron_retention	FALSE	canonical	1	10015	junction_3	286860.6181333704	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	936	2417	35.0	-1	True	AATAAA	-43
PB.11861.13	chr9	+	7182	31	novel_not_in_catalog	PRRC2B	novel	266	2	NA	NA	-21	-1963	any annotated donor/acceptor	FALSE	canonical	1	30413	junction_1	185327.4011527947	NA	5	NA	TRUE	NA	NA	NA	C	coding	1534	4605	244	4848	75.0	-34	True	NA	NA
PB.6733.12	chr2	-	4233	8	full-splice_match	AMMECR1L	ENST00000272647.9	4658	8	-38	463	-38	-456	multi-exon	FALSE	canonical	1	70418	junction_5	39749.48910671555	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	300	1232	15.0	-1593	False	ATTAAA	-21
PB.12370.1	chrX	+	2641	8	full-splice_match	VAMP7	ENST00000479687.6	742	8	-44	-1855	21	-5	multi-exon	FALSE	canonical	1	75	junction_2	11354.846686120696	NA	2	2	TRUE	NA	NA	NA	C	coding	173	522	307	828	25.0	-31	True	AATAAA	-16
PB.12370.2	chrX	+	2592	8	full-splice_match	VAMP7	ENST00000286448.11	2646	8	53	1	-12	-1	multi-exon	FALSE	canonical	1	1425	junction_1	11140.97158771924	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	113	775	20.0	1	True	AATAAA	-20
PB.7748.5	chr22	+	4604	14	novel_not_in_catalog	CSF2RB	novel	4863	14	NA	NA	-93	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	63498.59439221456	NA	4	NA	TRUE	NA	NA	NA	C	coding	835	2508	168	2675	60.0	-8	True	AATAAA	-10
PB.7748.4	chr22	+	4675	15	novel_not_in_catalog	CSF2RB	novel	4863	14	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_14	69713.34428623712	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	217	2742	55.0	6	True	AATAAA	-14
PB.7748.1	chr22	+	4881	14	full-splice_match	CSF2RB	ENST00000403662.7	4863	14	-32	14	-32	2	multi-exon	FALSE	canonical	1	91052	junction_1	49865.30233094164	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	255	2948	55.0	1	True	AATAAA	-14
PB.7748.3	chr22	+	4862	14	novel_in_catalog	CSF2RB	novel	4863	14	NA	NA	0	-3	intron_retention	FALSE	canonical	1	33575	junction_7	60137.698669817546	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	223	2934	65.0	0	True	AATAAA	-9
PB.7748.2	chr22	+	4790	15	novel_not_in_catalog	CSF2RB	novel	4863	14	NA	NA	-14	2	intron_retention	FALSE	canonical	1	342	junction_6	63135.62476748459	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	1181	2857	55.0	-9626	False	AATAAA	-14
PB.181.8	chr1	-	2266	6	novel_not_in_catalog	RSRP1	novel	1502	5	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	467984.7729196325	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	211	939	30.0	1	True	AATAAA	-19
PB.8817.22	chr4	-	2728	15	incomplete-splice_match	ANKRD17	ENST00000558247.5	8456	34	-494	64798	-18	-15006	3prime_fragment	FALSE	canonical	1	168210	junction_14	91023.17880302886	NA	0	NA	TRUE	NA	NA	NA	B	coding	860	2580	149	2728	55.0	24	True	AAAACA	-19
PB.181.2	chr1	-	1425	5	full-splice_match	RSRP1	ENST00000243189.11	1502	5	64	13	-1	-1	multi-exon	FALSE	canonical	1	161902	junction_2	403209.1873347971	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	739	1086	30.0	-2	True	AATAAA	-19
PB.181.3	chr1	-	2950	4	full-splice_match	RSRP1	ENST00000498238.1	2941	4	-10	1	-7	-1	multi-exon	FALSE	canonical	1	533792	junction_3	317726.1191658977	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	223	951	30.0	23	False	AATAAA	-19
PB.181.1	chr1	-	2029	5	full-splice_match	RSRP1	ENST00000568254.5	2013	5	3	-19	0	1	multi-exon	FALSE	canonical	1	20223	junction_2	450004.311211015	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	213	893	40.0	-1	True	AATAAA	-33
PB.181.6	chr1	-	2393	5	novel_not_in_catalog	RSRP1	novel	1502	5	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	456964.7459051819	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	213	941	30.0	-1	True	AATAAA	-19
PB.6733.13	chr2	-	4301	9	novel_not_in_catalog	AMMECR1L	novel	4658	8	NA	NA	28	-457	any annotated donor/acceptor	FALSE	canonical	1	18080	junction_3	57440.72282348452	NA	5	NA	TRUE	NA	NA	NA	C	coding	355	1068	234	1301	15.0	-1527	False	ATTAAA	-20
PB.181.4	chr1	-	2918	4	novel_in_catalog	RSRP1	novel	1502	5	NA	NA	22	-1	intron_retention	FALSE	canonical	1	11522	junction_3	518717.4446461409	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	191	919	30.0	NA	False	AATAAA	-19
PB.181.5	chr1	-	2824	5	novel_in_catalog	RSRP1	novel	1502	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	62064	junction_1	435809.03710936	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	222	950	30.0	24	False	AATAAA	-19
PB.5501.16	chr18	-	3893	13	full-splice_match	LMAN1	ENST00000251047.5	5521	13	694	934	-3	-934	multi-exon	FALSE	canonical	1	787348	junction_9	104890.67691526761	NA	7	NA	TRUE	NA	NA	NA	C	coding	510	1533	25	1557	25.0	-15	True	AGTAAA	-19
PB.5501.17	chr18	-	3716	13	full-splice_match	LMAN1	ENST00000251047.5	5521	13	691	1114	-6	-1114	multi-exon	FALSE	canonical	1	787348	junction_9	104890.67691526761	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	28	1560	40.0	-18	True	ATTAAA	-15
PB.5501.15	chr18	-	4212	13	full-splice_match	LMAN1	ENST00000251047.5	5521	13	701	608	4	-608	multi-exon	FALSE	canonical	1	787348	junction_9	104890.67691526761	NA	43	2	TRUE	NA	NA	NA	C	coding	510	1533	18	1550	45.0	-8	True	ATTAAA	-18
PB.3205.1	chr13	-	1522	7	incomplete-splice_match	MYCBP2	ENST00000357337.10	14736	84	-33	225374	-27	-1	intron_retention	FALSE	canonical	1	141427	junction_5	24104.223270460763	NA	9	NA	TRUE	NA	NA	NA	B	coding	406	1218	303	1520	75.0	8	True	NA	NA
PB.7174.4	chr20	-	4142	26	novel_not_in_catalog	JAG1	novel	5940	26	NA	NA	0	-226	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	123939.5793812453	NA	12	1	TRUE	NA	NA	NA	C	coding	1069	3210	470	3679	45.0	-1	True	AATAAA	-34
PB.5501.18	chr18	-	3201	13	full-splice_match	LMAN1	ENST00000251047.5	5521	13	694	1626	-3	1327	multi-exon	FALSE	canonical	1	787348	junction_9	104890.67691526761	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	25	1557	60.0	-15	True	NA	NA
PB.5501.19	chr18	-	1663	13	full-splice_match	LMAN1	ENST00000251047.5	5521	13	708	3150	11	-197	multi-exon	FALSE	canonical	1	787348	junction_9	104890.67691526761	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	11	1543	40.0	-1	True	AATAAA	-11
PB.3178.14	chr13	+	2198	3	novel_in_catalog	ALG11	novel	1404	2	NA	NA	1	-131	no_combination_of_known_junctions	FALSE	canonical	1	7800	junction_1	86192.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	720	1477	2196	75.0	-6	True	NA	NA
PB.1583.28	chr10	-	3518	15	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	57	-105	any annotated donor/acceptor	FALSE	canonical	1	404	junction_5	33731.672363352685	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	95	2392	20.0	0	True	AATAAA	-18
PB.3682.9	chr14	+	2862	17	novel_in_catalog	MARK3	novel	2643	16	NA	NA	-1	0	intron_retention	FALSE	canonical	1	71809	junction_16	210341.45651140634	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	1087	2808	50.0	-24	True	ATTAAA	-19
PB.3178.10	chr13	+	5196	5	novel_in_catalog	ALG11	novel	1404	2	NA	NA	1	49	combination_of_known_junctions	FALSE	canonical	1	5735	junction_2	76841.46719382706	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	1781	4081	85.0	-12	True	NA	NA
PB.3178.11	chr13	+	4896	3	novel_in_catalog	ALG11	novel	1404	2	NA	NA	3	49	no_combination_of_known_junctions	FALSE	canonical	1	7800	junction_1	86192.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	1481	3781	85.0	-10	True	NA	NA
PB.3178.12	chr13	+	6366	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-13	-3795	3	1288	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	18	NA	TRUE	NA	NA	NA	C	coding	766	2301	1712	4012	10.0	-10	True	AATATA	-45
PB.3178.13	chr13	+	2824	2	full-splice_match	ALG11	ENST00000523764.1	1404	2	7	-1427	1	-1087	multi-exon	FALSE	canonical	1	37877	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2280	545	2824	65.0	-6	True	NA	NA
PB.6552.1	chr2	-	4582	3	incomplete-splice_match	FBXO41	ENST00000295133.9	6928	12	9131	8	6305	0	5prime_fragment	FALSE	canonical	1	118509	junction_2	13580.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	112	339	2523	2861	30.0	9446	False	AATAAA	-20
PB.1583.20	chr10	-	3422	14	novel_in_catalog	LOXL4	novel	3653	15	NA	NA	57	-6	no_combination_of_known_junctions	FALSE	canonical	1	526	junction_6	34739.4608200963	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	95	2197	40.0	0	True	AATAAA	-21
PB.1583.22	chr10	-	3752	17	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-105	any annotated donor/acceptor	FALSE	canonical	1	479	junction_15	38135.49150515624	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	173	2626	20.0	-1	True	AATAAA	-18
PB.1583.25	chr10	-	3492	15	full-splice_match	LOXL4	ENST00000260702.3	3653	15	56	105	56	-105	multi-exon	FALSE	canonical	1	35845	junction_14	26739.685669030805	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	96	2366	20.0	-1	True	AATAAA	-18
PB.1583.24	chr10	-	3685	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	58	-105	any annotated donor/acceptor	FALSE	canonical	1	3712	junction_9	36859.485274877195	NA	21	1	TRUE	NA	NA	NA	C	coding	757	2274	286	2559	20.0	1	True	AATAAA	-18
PB.1583.27	chr10	-	3552	15	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	1051	-105	any annotated donor/acceptor	FALSE	canonical	1	64	junction_14	32037.766649976824	NA	13	NA	TRUE	NA	NA	NA	C	coding	756	2271	156	2426	20.0	994	False	AATAAA	-18
PB.1583.26	chr10	-	3565	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	54	-105	any annotated donor/acceptor	FALSE	canonical	1	185	junction_15	40139.09432372495	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	166	2439	20.0	-3	True	AATAAA	-18
PB.11763.7	chr9	-	2058	7	full-splice_match	STOM	ENST00000286713.6	3010	7	-46	998	2	695	multi-exon	FALSE	canonical	1	696589	junction_6	241903.70189493222	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	65	931	35.0	-4	True	AATAAA	-17
PB.12297.1	chrX	-	1381	1	full-splice_match	LDOC1	ENST00000370526.3	1381	1	-11	11	-11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	146	441	116	556	55.0	-41	True	AATAAA	-12
PB.6898.8	chr2	+	2598	6	novel_in_catalog	ASNSD1	novel	968	6	NA	NA	17	254	combination_of_known_junctions	FALSE	canonical	1	97703	junction_2	174215.70260180338	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	308	2239	85.0	21	True	NA	NA
PB.866.11	chr1	-	2323	12	full-splice_match	ARHGAP30	ENST00000368013.7	4394	12	233	1838	-37	4	multi-exon	FALSE	canonical	1	276777	junction_1	48181.20122332271	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2235	89	2323	60.0	-1	True	NA	NA
PB.8513.13	chr3	-	3172	14	novel_in_catalog	PHC3	novel	913	4	NA	NA	-1	-1672	combination_of_known_junctions	FALSE	canonical	1	15792	junction_10	80490.53741121104	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	32	2518	35.0	-14	True	TATAAA	-17
PB.9402.10	chr5	-	1659	5	full-splice_match	ATG12	ENST00000379594.7	1082	5	272	-849	0	-24	multi-exon	FALSE	canonical	1	6365	junction_3	29806.935320282424	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.9402.11	chr5	-	3806	2	incomplete-splice_match	ATG12	ENST00000513167.1	732	6	-24	3311	-3	-3311	intron_retention	FALSE	canonical	1	6365	junction_1	0.0	NA	22	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-4	True	NA	NA
PB.987.2	chr1	+	2549	5	full-splice_match	TSEN15	ENST00000644479.1	2247	5	-33	-269	1	-4	multi-exon	FALSE	canonical	1	8926	junction_4	210666.72988514346	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	34	447	45.0	-10	True	AATAAA	-9
PB.8863.1	chr4	+	2731	13	full-splice_match	GPAT3	ENST00000395226.6	2631	13	-103	3	30	0	multi-exon	FALSE	canonical	1	10546	junction_1	40039.631817529655	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	322	1626	25.0	0	True	AATAAA	-13
PB.981.6	chr1	+	3657	22	full-splice_match	SMG7	ENST00000515829.6	5629	22	-116	2088	-67	-161	multi-exon	FALSE	canonical	1	129392	junction_1	99709.78912677137	NA	1	NA	TRUE	NA	NA	NA	C	coding	1091	3276	211	3486	65.0	8	True	NA	NA
PB.11293.11	chr8	-	3770	6	full-splice_match	LRP12	ENST00000424843.6	4092	6	-8	330	-8	-305	multi-exon	FALSE	canonical	1	35820	junction_5	41711.722541271294	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	136	2658	70.0	-23	True	AATATA	-34
PB.8560.4	chr3	+	3755	19	novel_in_catalog	ABCF3	novel	2624	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	379104	junction_8	85245.88149032027	NA	34	3	TRUE	NA	NA	NA	C	coding	243	732	918	1649	5.0	-25	True	ATTAAA	-12
PB.8560.5	chr3	+	3855	18	novel_not_in_catalog	ABCF3	novel	2624	21	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_5	143056.59111936102	NA	11	1	TRUE	NA	NA	NA	C	coding	221	666	1081	1746	5.0	-16	True	ATTAAA	-15
PB.5764.3	chr19	+	1764	9	full-splice_match	RAD23A	ENST00000316856.7	1736	9	-17	-11	4	-8	multi-exon	FALSE	canonical	1	882131	junction_6	520599.5177314654	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	91	1179	35.0	-3	True	AATAAA	-6
PB.3682.1	chr14	+	2797	17	novel_in_catalog	MARK3	novel	2643	16	NA	NA	-35	0	intron_retention	TRUE	canonical	1	13298	junction_1	226868.93107612818	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	929	2743	50.0	-154	False	ATTAAA	-19
PB.7576.1	chr21	-	3125	8	novel_in_catalog	C21orf58	novel	1196	8	NA	NA	-11	-26	intron_retention	FALSE	canonical	1	13068	junction_7	40992.97231756404	NA	3	NA	TRUE	NA	NA	NA	B	coding	216	651	1636	2286	75.0	574	False	NA	NA
PB.7576.2	chr21	-	1946	1	novel_in_catalog	C21orf58	novel	2941	9	NA	NA	2	-7051	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	190	573	963	1535	100.0	2	True	NA	NA
PB.8560.3	chr3	+	2511	21	novel_in_catalog	ABCF3	novel	2624	21	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	8104	junction_3	132593.7683324522	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	738	2204	5.0	-32	True	ATTAAA	-15
PB.8669.2	chr4	-	1700	13	full-splice_match	MFSD10	ENST00000355443.8	1753	13	56	-3	-7	-1	multi-exon	FALSE	canonical	1	352520	junction_12	157638.40069397484	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	57	1424	25.0	21	True	AATAAA	-22
PB.8669.3	chr4	-	2465	9	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	352520	junction_8	178951.0098141388	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	737	1435	25.0	7558	False	AATAAA	-21
PB.8669.1	chr4	-	1829	12	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	352520	junction_11	161767.96999115075	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	79	1521	25.0	-1	True	AATAAA	-22
PB.2793.10	chr12	-	3244	2	novel_in_catalog	DUSP6	novel	4400	3	NA	NA	-4	-275	intron_retention	FALSE	canonical	1	521391	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	502	1314	80.0	-5	True	AAGAAA	-37
PB.8669.7	chr4	-	1650	13	full-splice_match	MFSD10	ENST00000503596.5	1589	13	-41	-20	2	-2	multi-exon	FALSE	canonical	1	131872	junction_8	236571.46477785287	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	111	839	25.0	7579	False	AATAAA	-21
PB.8669.4	chr4	-	2123	11	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	131872	junction_7	255662.91254900463	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1411	1848	25.0	2	True	AATAAA	-21
PB.8669.5	chr4	-	2084	12	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	352520	junction_11	162265.1897926548	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	700	1809	25.0	-17	True	AATAAA	-21
PB.10426.5	chr7	+	2721	6	full-splice_match	SP4	ENST00000222584.7	6126	6	17	3388	7	-3071	multi-exon	FALSE	canonical	1	35470	junction_1	21188.264814278682	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	202	2556	70.0	3	True	NA	NA
PB.11326.1	chr8	-	5547	28	full-splice_match	ATAD2	ENST00000287394.9	5565	28	15	3	15	-3	multi-exon	TRUE	canonical	1	251410	junction_27	83051.09982113836	NA	2	NA	TRUE	NA	NA	NA	C	coding	1390	4173	94	4266	25.0	-21	True	AATAAA	-23
PB.10426.4	chr7	+	4264	5	full-splice_match	SP4	ENST00000448246.1	4293	5	4	25	4	24	multi-exon	FALSE	canonical	1	1829	junction_2	38973.97299079862	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	565	1164	80.0	0	True	TATAAA	-38
PB.6652.4	chr2	-	1464	5	full-splice_match	TXNDC9	ENST00000264255.7	1637	5	74	99	-3	-99	multi-exon	FALSE	canonical	1	131458	junction_4	145375.3497631218	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	183	863	55.0	-56	False	ATTAAA	-23
PB.6652.5	chr2	-	1272	5	full-splice_match	TXNDC9	ENST00000264255.7	1637	5	130	235	1	-235	multi-exon	FALSE	canonical	1	131458	junction_4	145375.3497631218	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	127	807	25.0	0	True	ATTAAA	-21
PB.6652.2	chr2	-	3455	5	full-splice_match	TXNDC9	ENST00000264255.7	1637	5	77	-1895	0	1895	multi-exon	FALSE	canonical	1	131458	junction_4	145375.3497631218	NA	7	NA	TRUE	NA	NA	NA	C	coding	226	681	180	860	65.0	-53	False	NA	NA
PB.6652.3	chr2	-	2860	5	full-splice_match	TXNDC9	ENST00000264255.7	1637	5	100	-1323	-6	1323	multi-exon	FALSE	canonical	1	131458	junction_4	145375.3497631218	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	157	837	80.0	-30	False	NA	NA
PB.6652.1	chr2	-	2495	6	novel_not_in_catalog	TXNDC9	novel	1637	5	NA	NA	-6	7145	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	169453.00188359013	NA	2	1	TRUE	NA	NA	NA	C	coding	226	681	157	837	35.0	-30	False	AATAAA	-12
PB.5764.2	chr19	+	2033	8	novel_in_catalog	RAD23A	novel	1350	8	NA	NA	2	-8	intron_retention	FALSE	canonical	1	882131	junction_5	549210.2298206703	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	93	728	35.0	-5	True	AATAAA	-6
PB.5007.9	chr17	+	3113	5	novel_not_in_catalog	RUNDC1	novel	3828	5	NA	NA	1	-721	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	90380.29171056874	NA	3	1	TRUE	NA	NA	NA	C	coding	383	1152	709	1860	35.0	1	True	AGTAAA	-22
PB.5007.8	chr17	+	1995	4	novel_not_in_catalog	RUNDC1	novel	3828	5	NA	NA	0	1013	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	107351.13977452167	NA	1	1	TRUE	NA	NA	NA	C	coding	272	819	844	1662	70.0	0	True	NA	NA
PB.11541.2	chr9	+	2371	1	intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-517	False	AATAAA	-14
PB.11541.3	chr9	+	1869	1	intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-27
PB.11541.1	chr9	+	4538	1	intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	107	324	1296	1619	45.0	-2684	False	AATAAA	-14
PB.5007.3	chr17	+	3731	5	full-splice_match	RUNDC1	ENST00000361677.5	3828	5	0	97	0	-97	multi-exon	FALSE	canonical	1	40231	junction_1	73408.3331884058	NA	4	1	TRUE	NA	NA	NA	C	coding	613	1842	13	1854	25.0	0	True	AATGAA	-18
PB.5007.2	chr17	+	2518	4	full-splice_match	RUNDC1	ENST00000589705.1	959	4	-27	-1532	-11	-1122	multi-exon	FALSE	canonical	1	6480	junction_2	98801.50889873426	NA	1	1	TRUE	NA	NA	NA	C	coding	272	819	848	1666	100.0	-11	True	NA	NA
PB.5007.1	chr17	+	3656	5	novel_not_in_catalog	RUNDC1	novel	3828	5	NA	NA	-13	-192	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	90380.29171056874	NA	3	1	TRUE	NA	NA	NA	C	coding	383	1152	723	1874	20.0	-13	True	NA	NA
PB.6173.5	chr19	-	1988	5	full-splice_match	ZNF350	ENST00000243644.8	2338	5	-22	372	8	-372	multi-exon	FALSE	canonical	1	85942	junction_4	13350.91705651713	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	251	1849	35.0	-20	True	ATTAAA	-14
PB.5007.7	chr17	+	2192	5	novel_not_in_catalog	RUNDC1	novel	3828	5	NA	NA	0	1014	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	90380.29171056874	NA	3	1	TRUE	NA	NA	NA	C	coding	383	1152	707	1858	70.0	0	True	NA	NA
PB.5007.6	chr17	+	2544	5	full-splice_match	RUNDC1	ENST00000361677.5	3828	5	0	1284	0	-1284	multi-exon	FALSE	canonical	1	40231	junction_1	73408.3331884058	NA	2	NA	TRUE	NA	NA	NA	C	coding	613	1842	13	1854	65.0	0	True	NA	NA
PB.5007.5	chr17	+	3688	5	full-splice_match	RUNDC1	ENST00000361677.5	3828	5	-3	143	-3	-143	multi-exon	FALSE	canonical	1	40231	junction_1	73408.3331884058	NA	4	NA	TRUE	NA	NA	NA	C	coding	613	1842	16	1857	45.0	-3	True	NA	NA
PB.5007.4	chr17	+	2717	5	novel_not_in_catalog	RUNDC1	novel	3828	5	NA	NA	-7	-1122	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	90380.29171056874	NA	2	1	TRUE	NA	NA	NA	C	coding	383	1152	714	1865	100.0	-7	True	NA	NA
PB.525.2	chr1	-	4134	12	novel_not_in_catalog	GBP4	novel	6127	11	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	30654	junction_1	53068.34714663755	NA	2	NA	TRUE	NA	NA	NA	C	coding	640	1923	99	2021	35.0	-6	True	AATAAA	-14
PB.5186.3	chr17	+	1944	15	incomplete-splice_match	CEP95	ENST00000556440.6	3139	20	386	4956	-1	775	3prime_fragment	FALSE	canonical	1	75461	junction_5	67105.73537933268	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1818	125	1942	55.0	-17	True	AAGAAA	-24
PB.3384.1	chr14	+	1623	6	novel_in_catalog	FAM177A1	novel	3254	7	NA	NA	-100	339	combination_of_known_junctions	FALSE	canonical	1	16477	junction_2	282980.1100876173	NA	2	1	TRUE	NA	NA	NA	C	coding	181	546	580	1125	20.0	6	True	AATAAA	-17
PB.5186.1	chr17	+	2755	20	full-splice_match	CEP95	ENST00000556440.6	3139	20	392	-8	5	-1	multi-exon	FALSE	canonical	1	75461	junction_5	112824.62040343878	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	119	2584	25.0	-11	True	AATAAA	-20
PB.11573.1	chr9	-	1856	1	antisense	novelGene_LINC01410_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	110	333	3	335	5.0	1	True	NA	NA
PB.5186.5	chr17	+	2834	21	novel_not_in_catalog	CEP95	novel	3139	20	NA	NA	10	0	intron_retention	FALSE	canonical	1	122	junction_2	126552.23182278335	NA	1	1	TRUE	NA	NA	NA	C	coding	657	1974	698	2671	35.0	-6	True	AATAAA	-12
PB.5186.4	chr17	+	2651	19	novel_in_catalog	CEP95	novel	3139	20	NA	NA	2	-1	intron_retention	FALSE	canonical	1	55526	junction_4	119602.4346543581	NA	1	1	TRUE	NA	NA	NA	C	coding	264	795	1691	2485	20.0	-14	True	AATAAA	-15
PB.12033.8	chrX	+	5448	16	full-splice_match	DDX3X	ENST00000646196.1	5493	16	0	45	0	0	multi-exon	FALSE	canonical	1	872460	junction_4	417369.65035604703	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	1630	2958	10.0	0	True	AATAAA	-19
PB.8430.31	chr3	-	5399	19	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	930352	junction_18	258902.23960988718	NA	3	NA	TRUE	NA	NA	NA	C	coding	566	1701	3429	5129	25.0	-4	True	CATAAA	-13
PB.8430.36	chr3	-	3001	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	80	279	-4	-92	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	103	2823	20.0	-10	True	NA	NA
PB.8430.37	chr3	-	3083	23	novel_in_catalog	COPB2	novel	433	4	NA	NA	-3	32	combination_of_known_junctions	FALSE	canonical	1	61264	junction_22	429963.8544837373	NA	2	1	TRUE	NA	NA	NA	C	coding	877	2634	378	3011	30.0	-1	True	ACTAAA	-44
PB.8430.34	chr3	-	4467	21	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	930352	junction_20	246869.1711103069	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	2498	4198	25.0	-6	True	CATAAA	-12
PB.8430.35	chr3	-	2946	21	novel_in_catalog	COPB2	novel	433	4	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	13633	junction_14	378161.23597382376	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	998	2677	25.0	-7	True	CATAAA	-12
PB.6769.1	chr2	+	2855	3	incomplete-splice_match	TEX41	ENST00000630724.2	677	4	-89	-1456	6	1051	intron_retention	FALSE	canonical	1	550	junction_1	354.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	AATAAA	-18
PB.8430.38	chr3	-	2895	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	75	390	-9	27	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	108	2828	25.0	-15	True	ACTAAA	-39
PB.12033.2	chrX	+	4817	16	full-splice_match	DDX3X	ENST00000646122.1	4435	16	0	-382	0	3	multi-exon	FALSE	canonical	1	872460	junction_5	465079.06146080384	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	92	2017	50.0	0	True	AATAAA	-13
PB.12033.5	chrX	+	4650	16	full-splice_match	DDX3X	ENST00000642597.1	4327	16	0	-323	0	0	multi-exon	FALSE	canonical	1	542859	junction_14	491828.3798464483	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	733	2160	10.0	0	True	AATAAA	-19
PB.12033.4	chrX	+	4746	18	full-splice_match	DDX3X	ENST00000646223.1	6203	18	-2	1459	0	0	multi-exon	FALSE	canonical	1	5750	junction_3	682289.8472037792	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	388	2256	10.0	0	True	AATAAA	-19
PB.12033.7	chrX	+	4350	17	incomplete-splice_match	DDX3X	ENST00000625837.2	3237	19	814	14263	0	0	3prime_fragment	FALSE	canonical	1	2487	junction_16	589459.3344321451	NA	4	NA	TRUE	NA	NA	NA	C	coding	657	1974	92	2065	10.0	0	True	AATAAA	-19
PB.12033.6	chrX	+	4582	16	full-splice_match	DDX3X	ENST00000457138.7	4786	16	249	-45	0	4	multi-exon	FALSE	canonical	1	25515	junction_2	592059.8973952626	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	92	2032	50.0	0	True	AATAAA	-14
PB.4222.1	chr16	+	3959	17	full-splice_match	MGRN1	ENST00000586183.5	1841	17	-187	-1931	-16	-2	multi-exon	FALSE	canonical	1	56149	junction_16	173507.09831245692	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	188	1780	15.0	-52	False	AATAAA	-11
PB.4222.3	chr16	+	4015	18	novel_in_catalog	MGRN1	novel	556	5	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	56149	junction_17	158392.62960048925	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	178	1836	15.0	-42	False	AATAAA	-11
PB.4222.2	chr16	+	2948	17	full-splice_match	MGRN1	ENST00000399577.9	6425	17	-86	3563	-8	-1400	multi-exon	FALSE	canonical	1	75038	junction_16	137223.1589968053	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	180	1838	5.0	-44	False	NA	NA
PB.4222.5	chr16	+	3927	17	full-splice_match	MGRN1	ENST00000262370.11	3968	17	36	5	2	-3	multi-exon	FALSE	canonical	1	269826	junction_12	111004.2500990953	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	136	1866	15.0	0	True	AATAAA	-10
PB.4222.4	chr16	+	4141	19	novel_not_in_catalog	MGRN1	novel	556	5	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	1	1993	junction_1	198042.58119299327	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	418	1962	15.0	-41	False	AATAAA	-11
PB.4222.7	chr16	+	3860	16	full-splice_match	MGRN1	ENST00000588994.5	1665	16	-133	-2062	4	-2	multi-exon	FALSE	canonical	1	109216	junction_11	130327.05791633941	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	134	1798	15.0	2	True	AATAAA	-11
PB.4222.6	chr16	+	4062	18	novel_not_in_catalog	MGRN1	novel	556	5	NA	NA	-4	-3	any annotated donor/acceptor	TRUE	canonical	1	1657	junction_1	176001.06229710474	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	385	2001	15.0	-6	True	AATAAA	-10
PB.11243.4	chr8	+	4100	18	novel_not_in_catalog	DPY19L4	novel	680	4	NA	NA	3	-1993	any annotated donor/acceptor	FALSE	canonical	1	4005	junction_6	45212.546655006525	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	122	2167	40.0	-22	True	AATAAA	-20
PB.4222.8	chr16	+	3741	15	full-splice_match	MGRN1	ENST00000536343.5	1575	15	-5	-2161	-5	-2	multi-exon	FALSE	canonical	1	10609	junction_10	152633.90353424771	NA	24	1	TRUE	NA	NA	NA	C	coding	320	963	125	1087	15.0	11	True	AATAAA	-11
PB.11369.1	chr8	+	2562	3	full-splice_match	ZNF696	ENST00000330143.7	2795	3	168	65	135	-65	multi-exon	FALSE	canonical	1	41688	junction_1	2188.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	242	1366	35.0	140	False	TTTAAA	-19
PB.7485.7	chr21	+	5597	6	novel_not_in_catalog	BACH1	novel	325	2	NA	NA	31	-160	any annotated donor/acceptor	FALSE	canonical	1	15962	junction_1	163673.6859468864	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	232	2442	25.0	5	True	AATAAA	-23
PB.7485.6	chr21	+	5516	5	novel_not_in_catalog	BACH1	novel	325	2	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	canonical	1	3078	junction_2	153530.0027541441	NA	7	NA	TRUE	NA	NA	NA	C	coding	527	1584	620	2203	40.0	-1928	False	AATAAA	-25
PB.11228.2	chr8	-	3942	3	full-splice_match	TMEM64	ENST00000458549.6	4997	3	328	727	150	-727	multi-exon	FALSE	canonical	1	289278	junction_1	3457.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	433	993	30.0	-43	True	NA	NA
PB.5254.10	chr17	-	888	4	full-splice_match	H3F3B	ENST00000254810.8	2705	4	0	1817	0	-1	multi-exon	FALSE	canonical	1	3479945	junction_3	1304784.9093197954	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	134	544	35.0	-2	True	AATAAA	-16
PB.7720.15	chr22	-	2291	7	novel_not_in_catalog	PISD	novel	2669	8	NA	NA	14	-2	any annotated donor/acceptor	FALSE	canonical	1	686	junction_1	163369.37418180789	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	250	1032	70.0	7709	False	NA	NA
PB.7720.14	chr22	-	2036	6	novel_in_catalog	PISD	novel	2669	8	NA	NA	-2	0	no_combination_of_known_junctions	TRUE	canonical	1	3057	junction_5	210663.7008946724	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	160	939	70.0	1	True	NA	NA
PB.7720.13	chr22	-	2222	8	full-splice_match	PISD	ENST00000435900.5	1723	8	-37	-462	-2	0	multi-exon	FALSE	canonical	1	10242	junction_2	201949.27500160396	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	10	1125	70.0	-3	True	NA	NA
PB.7720.12	chr22	-	2292	7	novel_in_catalog	PISD	novel	2669	8	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	6030	junction_5	230405.4762664797	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	284	1195	70.0	-1	True	NA	NA
PB.7720.11	chr22	-	2339	7	novel_in_catalog	PISD	novel	2669	8	NA	NA	-87	0	no_combination_of_known_junctions	FALSE	canonical	1	6501	junction_6	207227.2175718131	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	220	1242	70.0	-15	True	NA	NA
PB.7720.10	chr22	-	2472	8	novel_in_catalog	PISD	novel	2669	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	35011	junction_7	199668.74131768284	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	251	1375	70.0	7708	False	NA	NA
PB.11542.6	chr9	+	4473	3	full-splice_match	EBLN3P	ENST00000629870.1	958	3	-129	-3386	-24	-114	multi-exon	FALSE	canonical	1	9870	junction_1	7285.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	10	True	NA	NA
PB.7415.1	chr20	-	2529	8	full-splice_match	PTK6	ENST00000542869.2	2931	8	-22	424	-6	0	multi-exon	FALSE	canonical	1	28322	junction_7	30193.314224124762	NA	0	NA	TRUE	NA	NA	NA	A	coding	451	1356	63	1418	100.0	-1	True	NA	NA
PB.3373.7	chr14	+	7058	7	full-splice_match	ARHGAP5	ENST00000539826.6	4881	7	-31	-2146	-13	13	multi-exon	FALSE	canonical	1	31414	junction_1	67273.6339214703	NA	1	NA	TRUE	NA	NA	NA	C	coding	1501	4506	272	4777	15.0	-64	True	ATTAAA	-30
PB.3373.6	chr14	+	7840	7	full-splice_match	ARHGAP5	ENST00000539826.6	4881	7	-37	-2922	-19	789	multi-exon	FALSE	canonical	1	31414	junction_1	67273.6339214703	NA	2	NA	TRUE	NA	NA	NA	C	coding	1501	4506	278	4783	15.0	-70	True	TATAAA	-25
PB.7057.25	chr2	+	3543	29	full-splice_match	SP100	ENST00000340126.8	2926	29	-61	-556	-16	-351	multi-exon	FALSE	canonical	1	98698	junction_15	276768.5555113155	NA	1	NA	TRUE	NA	NA	NA	C	coding	885	2658	93	2750	30.0	-15	True	NA	NA
PB.7328.3	chr20	-	2252	10	full-splice_match	SLC35C2	ENST00000243896.6	2447	10	-7	202	-4	-200	multi-exon	FALSE	canonical	1	21196	junction_9	206052.87246604008	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	491	1588	25.0	-11	True	AATAAA	-22
PB.7057.27	chr2	+	2253	5	incomplete-splice_match	SP100	ENST00000409341.5	1898	15	-42	21977	-16	-840	3prime_fragment	FALSE	canonical	1	431024	junction_1	104581.89390496808	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	93	647	85.0	-15	True	NA	NA
PB.7057.26	chr2	+	2865	29	novel_in_catalog	SP100	novel	3882	25	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	276852.1419593929	NA	14	3	TRUE	NA	NA	NA	C	coding	865	2598	93	2690	50.0	-15	True	TTTAAA	-44
PB.8480.7	chr3	+	3533	23	novel_in_catalog	MME	novel	2854	23	NA	NA	14	13	combination_of_known_junctions	FALSE	canonical	1	77072	junction_1	70598.69918792314	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	143	2395	35.0	0	True	AATAAA	-27
PB.3373.5	chr14	+	5854	7	full-splice_match	ARHGAP5	ENST00000539826.6	4881	7	-41	-932	-23	877	multi-exon	FALSE	canonical	1	31414	junction_1	67273.6339214703	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	282	4787	20.0	-74	True	AATAAA	-19
PB.7057.23	chr2	+	2271	25	novel_in_catalog	SP100	novel	3882	25	NA	NA	-19	-1291	combination_of_known_junctions	FALSE	canonical	1	46376	junction_24	271919.2879411273	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2175	96	2270	60.0	-18	True	NA	NA
PB.7328.2	chr20	-	2015	10	novel_in_catalog	SLC35C2	novel	5740	10	NA	NA	22	-199	intron_retention	FALSE	canonical	1	25338	junction_8	214598.48358121738	NA	2	1	TRUE	NA	NA	NA	C	coding	251	756	595	1350	20.0	-39	True	AATAAA	-23
PB.7057.29	chr2	+	1793	15	full-splice_match	SP100	ENST00000409341.5	1898	15	-42	147	-16	10	multi-exon	FALSE	canonical	1	431024	junction_1	116997.9590834553	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	93	1535	25.0	-15	True	AATAAA	-27
PB.7328.1	chr20	-	2063	10	full-splice_match	SLC35C2	ENST00000372230.9	2246	10	-18	201	-9	-199	multi-exon	FALSE	canonical	1	214279	junction_9	166682.79474128527	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	301	1398	20.0	-16	True	AATAAA	-23
PB.6545.1	chr2	-	5923	22	full-splice_match	EXOC6B	ENST00000272427.10	5918	22	-6	1	-6	-1	multi-exon	FALSE	canonical	1	94779	junction_15	29747.136023123825	NA	1	NA	TRUE	NA	NA	NA	A	coding	806	2421	153	2573	15.0	-33	True	ATTAAA	-32
PB.5256.12	chr17	-	4064	32	novel_not_in_catalog	UNC13D	novel	668	4	NA	NA	-10	-6	intron_retention	FALSE	canonical	1	1021	junction_20	78371.54094125472	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	1378	3330	25.0	12	True	AATAAA	-19
PB.5256.11	chr17	-	3835	32	novel_not_in_catalog	UNC13D	novel	668	4	NA	NA	14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	79934.62430046313	NA	2	1	TRUE	NA	NA	NA	C	coding	1256	3768	68	3835	80.0	-22	True	NA	NA
PB.5256.10	chr17	-	3993	32	novel_in_catalog	UNC13D	novel	668	4	NA	NA	-29	0	intron_retention	FALSE	canonical	1	52214	junction_31	67188.94737100844	NA	0	NA	TRUE	NA	NA	NA	C	coding	1071	3216	77	3292	80.0	-13	True	NA	NA
PB.11465.1	chr9	+	2524	1	antisense	novelGene_PSIP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-58	False	AATAAA	-10
PB.7328.7	chr20	-	2030	10	full-splice_match	SLC35C2	ENST00000243896.6	2447	10	-2	419	1	408	multi-exon	FALSE	canonical	1	21196	junction_9	206052.87246604008	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	486	1583	5.0	-6	True	AATAAA	-14
PB.6625.2	chr2	+	3611	2	novel_not_in_catalog	AC009237.3	novel	1427	2	NA	NA	179	-8	intron_retention	FALSE	canonical	1	303	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	110	333	1657	1989	90.0	-7	True	NA	NA
PB.2982.18	chr12	-	2185	10	incomplete-splice_match	CLIP1	ENST00000358808.6	5880	25	-46	69753	-3	-99	3prime_fragment	FALSE	canonical	1	45537	junction_2	128433.0091439805	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1983	202	2184	55.0	-4	True	AATAGA	-27
PB.2982.19	chr12	-	2194	10	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	-1	-140	any annotated donor/acceptor	FALSE	canonical	1	14910	junction_9	134383.8287890325	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1836	357	2192	75.0	-22	True	NA	NA
PB.10601.1	chr7	+	3320	17	novel_not_in_catalog	LIMK1	novel	3360	16	NA	NA	-170	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	199803.72949048923	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	152	2095	5.0	-9447	False	AATAAA	-25
PB.2982.14	chr12	-	3148	15	incomplete-splice_match	CLIP1	ENST00000358808.6	5880	25	-34	56868	9	4685	3prime_fragment	FALSE	canonical	1	45537	junction_7	139507.91430845018	NA	1	NA	TRUE	NA	NA	NA	C	coding	986	2958	190	3147	60.0	8	True	AAAAAG	-5
PB.2982.15	chr12	-	2828	13	incomplete-splice_match	CLIP1	ENST00000537178.5	5229	24	-15	61078	-15	-134	3prime_fragment	FALSE	canonical	1	109019	junction_12	95766.18264859122	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2595	234	2828	55.0	1039	False	NA	NA
PB.2982.16	chr12	-	2077	9	incomplete-splice_match	CLIP1	ENST00000537178.5	5229	24	20	69144	0	-99	3prime_fragment	FALSE	canonical	1	109019	junction_8	82568.94007575957	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1878	199	2076	55.0	-1	True	AATAGA	-27
PB.2982.17	chr12	-	2285	11	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	-19	-99	any annotated donor/acceptor	FALSE	canonical	1	391	junction_9	151121.46175871248	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1878	407	2284	55.0	1035	False	AATAGA	-27
PB.2982.10	chr12	-	3503	17	incomplete-splice_match	CLIP1	ENST00000537178.5	5229	24	22	44734	2	2455	3prime_fragment	FALSE	canonical	1	109019	junction_16	105529.87162462283	NA	28	1	TRUE	NA	NA	NA	C	coding	1102	3306	197	3502	55.0	1	True	NA	NA
PB.2982.11	chr12	-	3646	18	incomplete-splice_match	CLIP1	ENST00000358808.6	5880	25	-79	45343	-16	2455	3prime_fragment	FALSE	canonical	1	45537	junction_10	143553.5870750146	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3411	235	3645	55.0	1038	False	NA	NA
PB.2982.12	chr12	-	3197	15	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	-5	4688	any annotated donor/acceptor	FALSE	canonical	1	14910	junction_14	140736.51923044724	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2856	341	3196	60.0	-6	True	AAAAAG	-8
PB.2982.13	chr12	-	3060	14	incomplete-splice_match	CLIP1	ENST00000537178.5	5229	24	15	56256	-5	4688	3prime_fragment	FALSE	canonical	1	109019	junction_13	99349.71967453297	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2856	204	3059	60.0	-6	True	AAAAAG	-8
PB.2795.16	chr12	-	3562	3	full-splice_match	POC1B-GALNT4	ENST00000548729.5	5436	3	160	1714	160	812	multi-exon	FALSE	canonical	1	11095	junction_1	41137.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	144	1871	85.0	-41	True	NA	NA
PB.7756.9	chr22	+	2867	17	novel_in_catalog	GGA1	novel	3159	17	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	10075	junction_1	154191.2050014932	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	120	2015	10.0	-197	False	AATAAA	-17
PB.2795.14	chr12	-	5278	3	full-splice_match	POC1B-GALNT4	ENST00000548729.5	5436	3	151	7	151	-7	multi-exon	FALSE	canonical	1	11095	junction_1	41137.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	575	1728	153	1880	35.0	-50	True	AATAAA	-23
PB.2795.15	chr12	-	3673	1	full-splice_match	GALNT4	ENST00000529983.2	5399	1	12	1714	12	-1714	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	578	1737	246	1982	85.0	-5	True	NA	NA
PB.2795.12	chr12	-	2554	9	novel_in_catalog	POC1B	novel	5840	2	NA	NA	-35	-10	no_combination_of_known_junctions	FALSE	canonical	1	4168	junction_1	67102.88911440401	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	383	1129	45.0	-62	True	AATAAA	-15
PB.2795.13	chr12	-	5373	1	full-splice_match	GALNT4	ENST00000529983.2	5399	1	19	7	19	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	578	1737	239	1975	35.0	2	True	AATAAA	-23
PB.2795.10	chr12	-	2739	10	novel_not_in_catalog	POC1B	novel	5840	2	NA	NA	-27	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70782.42751759755	NA	7	1	TRUE	NA	NA	NA	C	coding	292	879	375	1253	45.0	-54	True	AATAAA	-15
PB.2795.11	chr12	-	2623	10	novel_in_catalog	POC1B	novel	5840	2	NA	NA	-23	-10	no_combination_of_known_junctions	FALSE	canonical	1	13378	junction_1	61502.54586439873	NA	3	1	TRUE	NA	NA	NA	C	coding	275	828	371	1198	45.0	-50	True	AATAAA	-15
PB.11137.9	chr8	+	3390	12	novel_in_catalog	TGS1	novel	3782	13	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	7255	junction_1	77085.47359536352	NA	14	NA	TRUE	NA	NA	NA	C	coding	757	2274	376	2649	25.0	-3	True	ATTAAA	-15
PB.7756.1	chr22	+	2798	17	full-splice_match	GGA1	ENST00000343632.8	3159	17	360	1	0	0	multi-exon	FALSE	canonical	1	206904	junction_1	125415.93648459749	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	39	1946	10.0	-2	True	AATAAA	-17
PB.7756.2	chr22	+	2628	16	novel_not_in_catalog	GGA1	novel	3159	17	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	167115.24192564443	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	47	1777	10.0	-10	True	AATAAA	-16
PB.7756.3	chr22	+	2830	17	novel_not_in_catalog	GGA1	novel	3159	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	2321	junction_4	164109.8886240058	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	587	1978	10.0	-3	True	AATAAA	-17
PB.7756.4	chr22	+	2886	17	novel_not_in_catalog	GGA1	novel	3159	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	16221	junction_9	162061.6191648715	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	1123	2034	10.0	-2	True	AATAAA	-17
PB.5534.14	chr18	-	1483	4	full-splice_match	MBP	ENST00000397860.7	4844	4	-26	3387	19	764	multi-exon	FALSE	canonical	1	139552	junction_3	61585.83981728267	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	242	835	65.0	1411	False	GATAAA	-11
PB.7756.6	chr22	+	2821	18	novel_not_in_catalog	GGA1	novel	3159	17	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	43	junction_13	186076.53804116222	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	38	1969	10.0	-1	True	AATAAA	-17
PB.7756.7	chr22	+	2643	16	novel_in_catalog	GGA1	novel	3159	17	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	7153	junction_10	166331.1587116898	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	37	1791	10.0	0	True	AATAAA	-17
PB.860.12	chr1	+	3068	6	full-splice_match	SLAMF7	ENST00000359331.8	2559	6	-43	-466	1	466	multi-exon	FALSE	canonical	1	26171	junction_4	186626.51651938423	NA	15	1	TRUE	NA	NA	NA	C	coding	296	891	55	945	80.0	1	True	NA	NA
PB.6445.29	chr2	-	2811	15	full-splice_match	PREPL	ENST00000409272.5	3030	15	221	-2	-23	2	multi-exon	FALSE	canonical	1	3327	junction_14	204793.98175469876	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	97	2280	30.0	220	False	AATAAA	-25
PB.5534.15	chr18	-	1992	1	novel_in_catalog	MBP	novel	2772	9	NA	NA	-413	-63794	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	117	354	2	355	80.0	1	True	NA	NA
PB.6663.3	chr2	-	2004	7	full-splice_match	RNF149	ENST00000295317.3	2458	7	8	446	8	-446	multi-exon	FALSE	canonical	1	342044	junction_6	86628.49981658589	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	101	1303	30.0	1	True	AATAAA	-22
PB.11984.9	chrX	-	1023	5	full-splice_match	AP1S2	ENST00000329235.6	2237	5	118	1096	-9	-10	multi-exon	FALSE	canonical	1	127	junction_3	296792.5483021558	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	1	600	85.0	-1	True	NA	NA
PB.11984.8	chrX	-	1387	5	full-splice_match	AP1S2	ENST00000329235.6	2237	5	118	732	-9	354	multi-exon	FALSE	canonical	1	127	junction_3	296792.5483021558	NA	5	NA	TRUE	NA	NA	NA	C	coding	199	600	1	600	35.0	-1	True	AATAAA	-27
PB.11984.7	chrX	-	1615	5	full-splice_match	AP1S2	ENST00000329235.6	2237	5	116	506	-11	-506	multi-exon	FALSE	canonical	1	127	junction_3	296792.5483021558	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	3	602	50.0	-3	True	TATAAA	-25
PB.5534.12	chr18	-	2485	4	full-splice_match	MBP	ENST00000397860.7	4844	4	-14	2373	-14	1778	multi-exon	FALSE	canonical	1	139552	junction_3	61585.83981728267	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	230	823	25.0	-1	True	AATAAA	-21
PB.11984.5	chrX	-	2073	6	novel_not_in_catalog	AP1S2	novel	2237	5	NA	NA	-9	-267	any annotated donor/acceptor	FALSE	canonical	1	127	junction_3	279737.61032110074	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	348	821	25.0	-1	True	AATAAA	-13
PB.11984.4	chrX	-	1816	5	full-splice_match	AP1S2	ENST00000329235.6	2237	5	154	267	3	-267	multi-exon	FALSE	canonical	1	127	junction_3	296792.5483021558	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	91	564	25.0	468	False	AATAAA	-13
PB.11984.3	chrX	-	1845	5	novel_not_in_catalog	AP1S2	novel	2237	5	NA	NA	-24	-266	any annotated donor/acceptor	FALSE	canonical	1	127	junction_3	303352.53886526154	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	251	592	25.0	-16	True	AATAAA	-14
PB.11984.2	chrX	-	2063	5	full-splice_match	AP1S2	ENST00000329235.6	2237	5	120	54	-7	-54	multi-exon	FALSE	canonical	1	127	junction_3	296792.5483021558	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	125	598	30.0	1	True	ATTAAA	-24
PB.11984.1	chrX	-	2097	5	novel_not_in_catalog	AP1S2	novel	2237	5	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	127	junction_3	303352.53886526154	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	238	579	20.0	-3	True	AATAAA	-20
PB.5534.13	chr18	-	2361	4	full-splice_match	MBP	ENST00000397860.7	4844	4	-14	2497	-14	1654	multi-exon	FALSE	canonical	1	139552	junction_3	61585.83981728267	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	230	823	70.0	-1	True	NA	NA
PB.5198.6	chr17	+	2431	19	novel_not_in_catalog	NOL11	novel	2947	18	NA	NA	-2	25	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	162698.48219584057	NA	18	3	TRUE	NA	NA	NA	C	coding	387	1164	20	1183	60.0	-7	True	GATAAA	-40
PB.5198.7	chr17	+	2126	18	full-splice_match	NOL11	ENST00000253247.8	2947	18	96	725	-2	-345	multi-exon	FALSE	canonical	1	97110	junction_7	142247.9820635872	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2106	20	2125	65.0	-7	True	ATTAAA	-3
PB.5198.4	chr17	+	2456	18	novel_not_in_catalog	NOL11	novel	2947	18	NA	NA	-17	-10	any annotated donor/acceptor	FALSE	canonical	1	16922	junction_14	143767.37943013225	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	35	1804	20.0	-22	True	AGTAAA	-25
PB.5198.5	chr17	+	3046	17	novel_in_catalog	NOL11	novel	2947	18	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	97110	junction_7	135001.18609473167	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	20	1798	20.0	-7	True	AGTAAA	-34
PB.5198.2	chr17	+	2126	14	incomplete-splice_match	NOL11	ENST00000253247.8	2947	18	75	5853	-23	707	3prime_fragment	FALSE	canonical	1	97110	junction_7	111222.21097318338	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	41	1819	90.0	-28	True	NA	NA
PB.5198.3	chr17	+	3170	16	novel_in_catalog	NOL11	novel	2947	18	NA	NA	-21	2	intron_retention	FALSE	canonical	1	97110	junction_7	147036.8934767356	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	39	1277	15.0	-26	True	AGTAAA	-37
PB.6169.1	chr19	+	3791	5	full-splice_match	ZNF175	ENST00000262259.6	6535	5	-28	2772	-28	-2	multi-exon	FALSE	canonical	1	46166	junction_1	14408.692419855453	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	387	2522	15.0	-17	True	NA	NA
PB.5198.1	chr17	+	2455	18	full-splice_match	NOL11	ENST00000253247.8	2947	18	102	390	4	-10	multi-exon	FALSE	canonical	1	97110	junction_7	142247.9820635872	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	14	2173	20.0	-1	True	AGTAAA	-25
PB.6155.21	chr19	-	1998	3	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	-18	-12137	intron_retention	FALSE	canonical	1	26258	junction_2	162876.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	298	1866	5.0	3093	False	NA	NA
PB.6155.20	chr19	-	2036	3	full-splice_match	NUP62	ENST00000597029.5	2053	3	16	1	2	0	multi-exon	FALSE	canonical	1	67824	junction_2	142093.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	335	1903	5.0	10	True	NA	NA
PB.5198.8	chr17	+	2338	18	novel_in_catalog	NOL11	novel	2947	18	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	3542	junction_17	156692.59456620555	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	19	2154	40.0	-6	True	AATAAA	-20
PB.5198.9	chr17	+	2617	17	incomplete-splice_match	NOL11	ENST00000253247.8	2947	18	105	381	7	-1	intron_retention	FALSE	canonical	1	97110	junction_7	146625.8439135454	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	11	2140	20.0	2	True	AGTAAA	-34
PB.2610.4	chr12	+	2121	9	novel_in_catalog	LETMD1	novel	1186	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4302	junction_1	189323.5723347977	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	31	1134	35.0	0	True	AGTAAA	-24
PB.2610.5	chr12	+	2105	9	full-splice_match	LETMD1	ENST00000262055.8	2112	9	9	-2	0	-1	multi-exon	FALSE	canonical	1	147192	junction_3	155743.0220992561	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	31	1113	35.0	0	True	AGTAAA	-29
PB.2610.6	chr12	+	1955	8	novel_in_catalog	LETMD1	novel	1186	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	51314	junction_2	174291.8863953951	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	31	963	35.0	0	True	AGTAAA	-29
PB.2610.7	chr12	+	1754	7	novel_in_catalog	LETMD1	novel	1186	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	4561	junction_2	197898.2209113788	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	31	762	35.0	0	True	AGTAAA	-29
PB.2610.1	chr12	+	2020	9	full-splice_match	LETMD1	ENST00000550929.5	1389	9	-13	-618	4	-1	multi-exon	FALSE	canonical	1	27336	junction_1	184967.3958181127	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	114	1028	35.0	-95	False	AGTAAA	-29
PB.2610.2	chr12	+	1973	2	novel_not_in_catalog	LETMD1	novel	1186	8	NA	NA	6	-1187	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-93	False	NA	NA
PB.2610.3	chr12	+	2620	8	novel_in_catalog	LETMD1	novel	1186	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	6967	junction_2	192446.0900600159	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	1023	1634	35.0	0	True	AGTAAA	-23
PB.860.15	chr1	+	2853	6	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	-767	intron_retention	FALSE	canonical	1	206654	junction_1	133590.6560708495	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	55	879	35.0	1	True	AATAAA	-26
PB.2610.8	chr12	+	1695	6	novel_in_catalog	LETMD1	novel	1186	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	12732	junction_3	241640.09888013208	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	31	708	35.0	0	True	AGTAAA	-24
PB.2610.9	chr12	+	1715	6	full-splice_match	LETMD1	ENST00000547008.5	1665	6	-1	-49	-1	0	multi-exon	FALSE	canonical	1	28808	junction_3	217715.78616407217	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	18	728	35.0	13	True	AGTAAA	-24
PB.8655.3	chr4	+	2155	9	full-splice_match	MAEA	ENST00000303400.8	2222	9	43	24	0	0	multi-exon	FALSE	canonical	1	468168	junction_7	98359.7623623826	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	21	1211	35.0	0	True	AATAAA	-21
PB.3658.7	chr14	-	2119	13	full-splice_match	SETD3	ENST00000331768.9	2878	13	-21	780	-11	-57	multi-exon	FALSE	canonical	1	275078	junction_12	90437.31663987401	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	182	1966	30.0	377	False	TATAAA	-23
PB.8655.1	chr4	+	1995	7	full-splice_match	MAEA	ENST00000509531.5	1001	7	-37	-957	-10	0	multi-exon	FALSE	canonical	1	14023	junction_3	253108.4359352397	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	38	775	15.0	-17	True	AATAAA	-44
PB.10559.1	chr7	+	3062	1	full-splice_match	ZNF736	ENST00000606716.1	424	1	-2648	10	-48	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	132	399	489	887	40.0	-29	True	AATAAA	-12
PB.8655.6	chr4	+	2189	9	full-splice_match	MAEA	ENST00000510794.5	1607	9	170	-752	146	0	multi-exon	FALSE	canonical	1	9743	junction_1	204056.311601686	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	35	1222	15.0	NA	False	AATAAA	-44
PB.8655.5	chr4	+	2051	8	full-splice_match	MAEA	ENST00000264750.10	2058	8	8	-1	2	0	multi-exon	FALSE	canonical	1	10721	junction_3	236757.9375376928	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	16	1083	10.0	5	True	AATAAA	-45
PB.8655.4	chr4	+	3581	8	novel_in_catalog	MAEA	novel	2222	9	NA	NA	1	3	intron_retention	FALSE	canonical	1	494789	junction_4	88502.06281926601	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	17	1087	25.0	4	True	AATAAA	-24
PB.6060.2	chr19	-	3193	5	full-splice_match	ZNF235	ENST00000650576.1	3162	5	-19	-12	2	-2	multi-exon	FALSE	canonical	1	12206	junction_1	16873.985263935134	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	123	2327	20.0	-20	False	AGTAAA	-12
PB.6060.1	chr19	-	3192	5	full-splice_match	ZNF235	ENST00000291182.8	3188	5	1	-5	1	3	multi-exon	TRUE	canonical	1	12112	junction_1	16908.88376527262	NA	2	1	TRUE	NA	NA	NA	C	coding	738	2217	103	2319	10.0	0	True	AGTAAA	-19
PB.860.18	chr1	+	2477	5	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	14005	junction_3	207824.5840455058	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	55	825	40.0	1	True	NA	NA
PB.11274.10	chr8	-	2700	16	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	1973368.5736341253	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	481	2256	10.0	-2	True	AATAAA	-16
PB.11125.6	chr8	+	2221	4	full-splice_match	UBE2V2	ENST00000523111.6	4373	4	31	2121	-11	1017	multi-exon	FALSE	canonical	1	699726	junction_1	68940.94818192032	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	25	462	95.0	0	True	NA	NA
PB.12073.3	chrX	-	3267	10	novel_not_in_catalog	TFE3	novel	3279	10	NA	NA	55	2	any annotated donor/acceptor	FALSE	canonical	1	16452	junction_8	199716.74135690834	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	471	1838	20.0	-1	True	AATAAA	-35
PB.6500.1	chr2	-	2887	18	full-splice_match	WDPCP	ENST00000272321.11	3392	18	486	19	-47	0	multi-exon	FALSE	canonical	1	20267	junction_4	9707.717500305822	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	43	2283	100.0	419	False	NA	NA
PB.6500.2	chr2	-	2541	18	full-splice_match	WDPCP	ENST00000272321.11	3392	18	353	498	54	-50	multi-exon	FALSE	canonical	1	20267	junction_4	9707.717500305822	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	176	2416	10.0	1	True	TATAAA	-13
PB.6500.3	chr2	-	3275	18	novel_not_in_catalog	WDPCP	novel	2122	9	NA	NA	-6	-28882	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	13019.463041776868	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	236	2626	25.0	11	True	AATAAA	-19
PB.6500.4	chr2	-	2139	12	incomplete-splice_match	WDPCP	ENST00000409835.5	2277	13	0	18447	0	-393	3prime_fragment	FALSE	canonical	1	34821	junction_11	5865.001805781323	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	248	1999	20.0	-1	True	AATATA	-18
PB.11444.7	chr9	-	4345	13	novel_not_in_catalog	ERMP1	novel	3554	16	NA	NA	-17	-632	any annotated donor/acceptor	FALSE	canonical	1	315	junction_8	85358.8962425303	NA	1	NA	TRUE	NA	NA	NA	C	coding	780	2343	64	2406	10.0	-47	True	AATAAA	-19
PB.7948.1	chr3	-	7153	40	full-splice_match	NUP210	ENST00000254508.6	7193	40	45	-5	45	5	multi-exon	FALSE	non_canonical	0	0	junction_33	160700.3970964435	NA	1	NA	TRUE	NA	NA	NA	C	coding	1887	5664	39	5702	15.0	27	True	AATAAA	-25
PB.11924.1	chr9	+	1563	4	full-splice_match	TUBB4B	ENST00000340384.4	1637	4	74	0	-1	0	multi-exon	FALSE	canonical	1	3705142	junction_2	464701.002334476	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	75	1412	5.0	0	True	ATTAAA	-15
PB.11840.1	chr9	-	2854	15	full-splice_match	CRAT	ENST00000458362.5	2253	15	0	-601	0	14	multi-exon	FALSE	canonical	1	90718	junction_13	142474.89548568957	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	436	2253	30.0	-1	True	AATAAA	-18
PB.10447.1	chr7	-	5279	1	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	2338	5865	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	8842	False	NA	NA
PB.11386.1	chr8	-	2553	2	novel_not_in_catalog	PLEC	novel	14803	32	NA	NA	19157	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	472	1419	112	1530	0.0	9087	False	AATAAA	-15
PB.11274.19	chr8	-	2472	15	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	13982	junction_13	1908436.3276954337	NA	4	NA	TRUE	NA	NA	NA	C	coding	588	1767	506	2272	85.0	-2	True	NA	NA
PB.1886.19	chr11	+	4212	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	149	-923	30	231	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	63	2192	40.0	0	True	TATAAA	-16
PB.169.2	chr1	-	3182	8	novel_not_in_catalog	FUCA1	novel	2047	8	NA	NA	0	-8	any annotated donor/acceptor	TRUE	canonical	0	0	junction_2	171246.0153344257	NA	8	NA	TRUE	NA	NA	NA	C	coding	387	1164	9	1172	50.0	-5	True	AATAAA	-28
PB.169.3	chr1	-	2042	8	full-splice_match	FUCA1	ENST00000374479.3	2047	8	-3	8	-3	-8	multi-exon	FALSE	canonical	1	224705	junction_7	106273.64455930909	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	12	1412	50.0	-8	True	AATAAA	-28
PB.1886.14	chr11	+	3402	18	novel_not_in_catalog	CAPRIN1	novel	4108	19	NA	NA	87	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	569634.1231536713	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	37	2121	35.0	-562	False	NA	NA
PB.1886.15	chr11	+	3823	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	308	-693	189	1	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	63	2033	10.0	118	False	AATAAA	-23
PB.1886.16	chr11	+	3453	17	full-splice_match	CAPRIN1	ENST00000530820.5	3454	17	1	0	1	0	multi-exon	FALSE	canonical	1	1319017	junction_1	336784.7880472038	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	92	2176	35.0	-11	True	NA	NA
PB.1886.17	chr11	+	4983	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	87	-1632	-32	940	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	3	NA	TRUE	NA	NA	NA	C	coding	709	2130	125	2254	30.0	-3	True	ATTAAA	-24
PB.1886.10	chr11	+	2588	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	24	1496	24	146	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	166	2295	35.0	15	True	AGTAAA	-23
PB.1886.11	chr11	+	3397	19	novel_not_in_catalog	CAPRIN1	novel	4108	19	NA	NA	-11	51	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	624486.0255814055	NA	6	1	TRUE	NA	NA	NA	C	coding	491	1476	152	1627	35.0	-679	False	AATAAA	-24
PB.1886.12	chr11	+	3843	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	47	218	-2	-213	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	143	2272	25.0	-2	True	ATTAAA	-14
PB.1886.13	chr11	+	3940	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	194	-696	75	4	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	18	2147	15.0	4	True	AATAAA	-26
PB.6335.2	chr2	-	3659	6	novel_in_catalog	LAPTM4A	novel	1765	7	NA	NA	357	-2	intron_retention	FALSE	canonical	1	2971351	junction_4	681991.7772123063	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	152	604	15.0	-10	True	AATAAA	-15
PB.3046.16	chr13	-	4342	7	incomplete-splice_match	XPO4	ENST00000255305.10	9921	23	45	46263	9	32042	3prime_fragment	FALSE	canonical	1	90241	junction_5	16889.589134697413	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	31	894	80.0	3	True	NA	NA
PB.6335.1	chr2	-	1370	7	full-splice_match	LAPTM4A	ENST00000175091.4	1765	7	394	1	394	-1	multi-exon	FALSE	canonical	1	2971351	junction_5	655477.3157944819	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	115	816	20.0	-15	True	AATAAA	-16
PB.1107.7	chr1	-	6367	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	-13	-1526	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	3	NA	TRUE	NA	NA	NA	C	coding	370	1113	339	1451	30.0	-7	True	AATAAA	-18
PB.1107.4	chr1	-	7782	8	full-splice_match	LPGAT1	ENST00000366997.8	7782	8	-2	2	-2	-2	multi-exon	FALSE	canonical	1	17621	junction_7	88684.87104808986	NA	5	NA	TRUE	NA	NA	NA	C	coding	370	1113	230	1342	15.0	-12	True	AATAAA	-15
PB.5470.8	chr18	-	2240	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	-42	-3	combination_of_known_junctions	FALSE	canonical	1	58548	junction_11	208791.22695946702	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	238	1641	30.0	-26	True	AATAAA	-33
PB.11444.5	chr9	-	5007	13	novel_in_catalog	ERMP1	novel	3554	16	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	25519	junction_5	70717.12437101467	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	89	2437	15.0	-72	True	AATAAA	-11
PB.294.6	chr1	+	2735	6	full-splice_match	ZC3H12A	ENST00000640233.1	2721	6	0	-14	0	-5	multi-exon	FALSE	canonical	1	9866	junction_4	95916.6810505868	NA	2	1	TRUE	NA	NA	NA	C	coding	283	852	89	940	20.0	0	True	AATAAA	-23
PB.3046.14	chr13	-	3762	25	novel_not_in_catalog	XPO4	novel	9921	23	NA	NA	6	-6374	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	68593.41177426104	NA	0	NA	TRUE	NA	NA	NA	C	coding	1077	3234	511	3744	25.0	0	True	AATAAA	-18
PB.10244.1	chr6	+	3040	1	incomplete-splice_match	HECA	ENST00000367658.2	5614	4	42649	2	42649	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-757	False	AATAAA	-13
PB.9210.15	chr5	-	2551	10	full-splice_match	HMGCS1	ENST00000433297.2	3466	10	34	881	-4	-881	multi-exon	FALSE	canonical	1	418002	junction_9	325268.98018971056	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	134	1696	60.0	-1	True	NA	NA
PB.9210.14	chr5	-	3045	10	full-splice_match	HMGCS1	ENST00000433297.2	3466	10	35	386	-3	-386	multi-exon	FALSE	canonical	1	418002	junction_9	325268.98018971056	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	133	1695	40.0	0	True	AATAAA	-15
PB.9210.17	chr5	-	2326	11	full-splice_match	HMGCS1	ENST00000325110.10	3506	11	-3	1183	-3	-1183	multi-exon	FALSE	canonical	1	372008	junction_10	354266.130998491	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	211	1773	55.0	-19	False	AAAACA	-17
PB.3046.15	chr13	-	3822	19	incomplete-splice_match	XPO4	ENST00000255305.10	9921	23	58	12241	-5	-12240	3prime_fragment	FALSE	canonical	1	90241	junction_17	39399.615393286374	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	18	2975	50.0	-7	True	NA	NA
PB.9210.11	chr5	-	4297	9	novel_not_in_catalog	HMGCS1	novel	3506	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	33990	junction_7	465363.1593438613	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	1591	2562	25.0	-4	True	AATAAA	-19
PB.11806.5	chr9	+	2455	7	full-splice_match	CDK9	ENST00000373264.4	2463	7	2	6	2	-6	multi-exon	FALSE	canonical	1	621788	junction_5	122950.44219612316	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	99	1217	50.0	17	True	AGTAAA	-5
PB.9210.13	chr5	-	3039	11	full-splice_match	HMGCS1	ENST00000325110.10	3506	11	81	386	61	-386	multi-exon	FALSE	canonical	1	372008	junction_10	354266.130998491	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	127	1689	40.0	-1	True	AATAAA	-15
PB.9210.12	chr5	-	3560	12	novel_not_in_catalog	HMGCS1	novel	3506	11	NA	NA	64	-1	intron_retention	FALSE	canonical	1	720	junction_8	494629.14293586777	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	887	1825	25.0	2	True	AATAAA	-19
PB.3046.12	chr13	-	3709	24	novel_not_in_catalog	XPO4	novel	9921	23	NA	NA	14	-6368	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	60232.901390618295	NA	3	NA	TRUE	NA	NA	NA	C	coding	1077	3234	452	3685	25.0	224	False	AATAAA	-24
PB.9210.19	chr5	-	1910	9	novel_in_catalog	HMGCS1	novel	3506	11	NA	NA	32	-1359	no_combination_of_known_junctions	FALSE	canonical	1	39026	junction_7	464203.344724863	NA	2	1	TRUE	NA	NA	NA	C	coding	478	1437	97	1533	35.0	5	True	ATTAAA	-17
PB.9210.18	chr5	-	2041	10	full-splice_match	HMGCS1	ENST00000433297.2	3466	10	66	1359	27	-1359	multi-exon	FALSE	canonical	1	418002	junction_9	325268.98018971056	NA	5	NA	TRUE	NA	NA	NA	C	coding	520	1563	102	1664	35.0	0	True	ATTAAA	-17
PB.1328.10	chr10	+	2786	10	novel_in_catalog	COMMD3-BMI1	novel	508	5	NA	NA	7513	1523	no_combination_of_known_junctions	FALSE	canonical	1	32918	junction_1	190302.72374558292	NA	0	NA	TRUE	NA	NA	NA	B	coding	310	933	331	1263	20.0	-17	False	ATTAAA	-14
PB.3550.4	chr14	+	2297	11	novel_in_catalog	PTGR2	novel	3851	10	NA	NA	26223	45452	no_combination_of_known_junctions	FALSE	canonical	1	5352	junction_1	137630.43943114474	NA	16	NA	TRUE	NA	NA	NA	C	coding	425	1278	282	1559	5.0	0	True	AATAAA	-18
PB.3550.5	chr14	+	2221	12	full-splice_match	ZNF410	ENST00000555044.5	2601	12	-35	415	-23	-151	multi-exon	FALSE	canonical	1	255085	junction_1	80478.71506673915	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	230	1666	15.0	-23	True	AATAAA	-16
PB.3550.6	chr14	+	2456	13	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34862	-1	no_combination_of_known_junctions	FALSE	canonical	1	4303	junction_4	160897.73758448428	NA	0	NA	TRUE	NA	NA	NA	B	coding	495	1488	233	1720	5.0	-26	True	AATAAA	-16
PB.3550.7	chr14	+	2322	12	novel_not_in_catalog	AC005520.1	novel	3695	22	NA	NA	34868	-1	any annotated donor/acceptor	FALSE	canonical	1	5337	junction_9	132808.16396853855	NA	0	NA	TRUE	NA	NA	NA	B	coding	395	1188	227	1414	5.0	-20	True	AATAAA	-16
PB.6502.1	chr2	+	1856	8	novel_in_catalog	AC012368.1	novel	552	6	NA	NA	33	-3	intron_retention	FALSE	canonical	1	5896	junction_3	34177.08704822635	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	NA	NA
PB.3046.10	chr13	-	6615	23	novel_in_catalog	XPO4	novel	9921	23	NA	NA	4	-3254	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	65223.78746109936	NA	1	NA	TRUE	NA	NA	NA	C	coding	972	2919	559	3477	20.0	2	True	NA	NA
PB.3550.2	chr14	+	2381	12	full-splice_match	ZNF410	ENST00000555044.5	2601	12	-11	231	1	2	multi-exon	FALSE	canonical	1	255085	junction_1	80478.71506673915	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	206	1642	10.0	1	True	AATAAA	-19
PB.3550.3	chr14	+	2594	13	novel_in_catalog	PTGR2	novel	3851	10	NA	NA	26223	45449	no_combination_of_known_junctions	FALSE	canonical	1	2440	junction_11	156276.9020590935	NA	5	NA	TRUE	NA	NA	NA	C	coding	499	1500	305	1804	5.0	0	True	AATAAA	-15
PB.294.5	chr1	+	2845	5	novel_not_in_catalog	ZC3H12A	novel	2684	6	NA	NA	0	-4	intron_retention	FALSE	canonical	1	59628	junction_1	76026.98328554146	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	86	1288	20.0	0	True	AATAAA	-24
PB.4611.5	chr16	-	3060	11	novel_in_catalog	CBFA2T3	novel	4033	11	NA	NA	-41	-13	combination_of_known_junctions	FALSE	canonical	1	29117	junction_10	39494.086957543404	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	439	2325	65.0	1911	False	AGTAAA	-19
PB.4262.2	chr16	+	2892	8	full-splice_match	BFAR	ENST00000261658.6	3039	8	142	5	14	0	multi-exon	FALSE	canonical	1	373444	junction_5	108531.21648556573	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	136	1488	50.0	6	True	AATAAA	-25
PB.4611.3	chr16	-	3597	12	full-splice_match	CBFA2T3	ENST00000268679.8	4477	12	211	669	87	-2	multi-exon	FALSE	canonical	1	29117	junction_11	39403.030931789624	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	187	2148	75.0	-17	True	NA	NA
PB.4611.2	chr16	-	4310	11	novel_in_catalog	CBFA2T3	novel	4033	11	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	1	29117	junction_10	39494.086957543404	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	307	2193	25.0	-4	True	AATAAA	-34
PB.4611.1	chr16	-	4474	12	full-splice_match	CBFA2T3	ENST00000268679.8	4477	12	2	1	2	-1	multi-exon	FALSE	canonical	1	29117	junction_11	39403.030931789624	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	396	2357	25.0	4	True	AATAAA	-34
PB.1983.6	chr11	+	3381	5	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-21	0	intron_retention	FALSE	canonical	1	5729	junction_4	18385.3211200539	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1191	2069	15.0	-5047	False	AATAAA	-15
PB.1983.7	chr11	+	3423	10	incomplete-splice_match	BEST1	ENST00000378043.8	2740	11	529	-2	-3	2	intron_retention	FALSE	canonical	1	8821	junction_2	52058.058491232114	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	115	2109	20.0	-3	True	AATAAA	-17
PB.1983.4	chr11	+	3270	10	incomplete-splice_match	BEST1	ENST00000524926.5	2404	11	-43	387	-36	-220	3prime_fragment	FALSE	canonical	0	0	junction_7	53583.16444924713	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	148	1455	25.0	-5062	False	AATGAA	-16
PB.1983.5	chr11	+	2051	10	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-23	8	combination_of_known_junctions	FALSE	canonical	1	12603	junction_1	50944.58621790524	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	127	1704	35.0	-5049	False	AATAAA	-23
PB.1983.2	chr11	+	3041	9	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-1	-223	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	55049.805983848615	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	102	1229	25.0	2	True	AATGAA	-13
PB.1983.3	chr11	+	3280	9	full-splice_match	BEST1	ENST00000449131.6	4267	9	-59	1046	-42	8	multi-exon	FALSE	canonical	1	12603	junction_1	53148.2117183577	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	146	1960	35.0	-5068	False	AATAAA	-23
PB.1983.1	chr11	+	3051	5	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-81	-223	intron_retention	FALSE	canonical	1	5729	junction_4	18385.3211200539	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	1251	2129	25.0	-5107	False	AATGAA	-13
PB.4363.1	chr16	-	1721	2	novel_not_in_catalog	NPIPB13	novel	3584	8	NA	NA	1003	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	coding	511	1536	137	1672	75.0	NA	False	NA	NA
PB.6663.5	chr2	-	1697	4	incomplete-splice_match	RNF149	ENST00000295317.3	2458	7	-8	12164	-3	453	3prime_fragment	FALSE	canonical	1	342044	junction_3	81592.80504363659	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	117	1001	100.0	-15	True	NA	NA
PB.9035.4	chr4	-	3267	15	full-splice_match	PLRG1	ENST00000302078.9	1673	15	-2	-1592	1	-21	multi-exon	FALSE	canonical	1	18750	junction_11	212909.92530929405	NA	3	NA	TRUE	NA	NA	NA	C	coding	505	1518	92	1609	75.0	-4	True	NA	NA
PB.1983.8	chr11	+	3629	10	incomplete-splice_match	BEST1	ENST00000524926.5	2404	11	-9	-6	-2	6	intron_retention	FALSE	canonical	0	0	junction_7	53583.16444924713	NA	3	NA	TRUE	NA	NA	NA	C	coding	435	1308	114	1421	30.0	-2	True	AATAAA	-21
PB.1983.9	chr11	+	3316	9	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-2	-453	intron_retention	FALSE	canonical	1	8821	junction_2	53727.42850476258	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	948	2624	65.0	-2	True	NA	NA
PB.8288.3	chr3	-	3395	21	full-splice_match	CIP2A	ENST00000295746.12	4075	21	0	680	0	518	multi-exon	FALSE	canonical	1	114424	junction_11	55016.664564838895	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	78	2795	30.0	-32	True	AATAAA	-23
PB.8288.2	chr3	-	4029	21	full-splice_match	CIP2A	ENST00000295746.12	4075	21	-181	227	11	-110	multi-exon	TRUE	canonical	1	114424	junction_11	55016.664564838895	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	259	2976	15.0	0	True	AATACA	-13
PB.8288.5	chr3	-	2502	19	incomplete-splice_match	CIP2A	ENST00000295746.12	4075	21	-18	3779	-14	-2532	3prime_fragment	FALSE	canonical	1	114424	junction_9	51104.747191158494	NA	7	1	TRUE	NA	NA	NA	C	coding	802	2406	96	2501	25.0	380	False	NA	NA
PB.8288.4	chr3	-	2926	21	full-splice_match	CIP2A	ENST00000295746.12	4075	21	10	1139	10	59	multi-exon	FALSE	canonical	1	114424	junction_11	55016.664564838895	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	68	2785	20.0	-22	True	AGTAAA	-14
PB.8288.7	chr3	-	2341	18	novel_not_in_catalog	CIP2A	novel	4075	21	NA	NA	9	-3260	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	70272.4409037739	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1023	1317	2339	35.0	-2	True	AAAAAG	-33
PB.8288.6	chr3	-	2389	18	incomplete-splice_match	CIP2A	ENST00000295746.12	4075	21	12	4507	-9	-3260	3prime_fragment	FALSE	canonical	1	114424	junction_8	41821.63007360953	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2322	66	2387	35.0	-20	True	AAAAAG	-33
PB.8288.8	chr3	-	2309	18	incomplete-splice_match	CIP2A	ENST00000481530.5	2764	21	28	3260	7	-3260	3prime_fragment	FALSE	canonical	1	6001	junction_15	58434.77421078774	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1845	463	2307	35.0	-4	True	AAAAAG	-33
PB.11315.1	chr8	+	2573	9	full-splice_match	DEPTOR	ENST00000286234.5	2569	9	0	-4	0	4	multi-exon	FALSE	canonical	1	118594	junction_6	22378.391765272143	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	131	1360	20.0	-9	True	AATAAA	-19
PB.5470.4	chr18	-	3117	10	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	25	974	combination_of_known_junctions	FALSE	canonical	1	38312	junction_8	226003.03348160812	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	228	1541	5.0	1012	False	NA	NA
PB.11275.30	chr8	-	2469	5	full-splice_match	YWHAZ	ENST00000522542.5	1394	5	30	-1105	30	-38	multi-exon	FALSE	canonical	1	114	junction_4	887659.02307319	NA	2	1	TRUE	NA	NA	NA	C	coding	125	378	123	500	30.0	8650	False	NA	NA
PB.6867.7	chr2	-	2739	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	226	3010	226	-3010	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	665	1998	40	2037	35.0	-1	True	AATAAA	-19
PB.11542.8	chr9	+	3809	3	full-splice_match	EBLN3P	ENST00000629870.1	958	3	-126	-2725	-21	-775	multi-exon	FALSE	canonical	1	9870	junction_1	7285.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	13	True	NA	NA
PB.9159.3	chr5	+	4326	3	full-splice_match	PURPL	ENST00000512067.5	1610	3	-4	-2712	-4	2712	multi-exon	FALSE	canonical	1	3044	junction_2	22982.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-13	True	AATAAA	-27
PB.6298.15	chr2	-	2104	16	incomplete-splice_match	KIDINS220	ENST00000256707.7	7361	30	18	57348	5	3779	3prime_fragment	FALSE	canonical	1	144075	junction_15	64921.10977609672	NA	0	NA	TRUE	NA	NA	NA	B	coding	646	1938	165	2102	10.0	5	True	NA	NA
PB.27.3	chr1	-	2595	20	novel_not_in_catalog	CDK11B	novel	2998	20	NA	NA	10	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	267119.8292098143	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	103	2421	20.0	-31	True	ATTAAA	-22
PB.11830.1	chr9	-	1133	5	full-splice_match	ZDHHC12	ENST00000372663.8	1129	5	-16	12	-1	-1	multi-exon	FALSE	canonical	1	302959	junction_4	126153.61606192666	NA	0	NA	TRUE	NA	NA	NA	A	coding	267	804	30	833	60.0	4	True	TATAAA	-14
PB.9159.2	chr5	+	2845	4	incomplete-splice_match	PURPL	ENST00000505775.5	946	6	-38	7123	-23	1049	3prime_fragment	FALSE	canonical	1	8385	junction_2	17961.676443658223	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	253	555	75.0	-32	True	NA	NA
PB.7978.6	chr3	+	701	4	full-splice_match	RPL15	ENST00000307839.9	2730	4	603	1426	0	0	multi-exon	FALSE	canonical	1	3978	junction_2	1766260.5367885754	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	37	651	20.0	0	True	AATAAA	-16
PB.5484.8	chr18	+	3252	12	full-splice_match	SMAD4	ENST00000342988.7	8769	12	262	5255	-122	7	multi-exon	FALSE	canonical	1	131131	junction_1	105261.85899794131	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	286	1935	20.0	253	False	AATAAA	-24
PB.7978.4	chr3	+	3705	1	novel_in_catalog	RPL15	novel	2730	4	NA	NA	2	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	152	459	338	796	40.0	2	True	AATAAA	-13
PB.7978.5	chr3	+	1005	4	full-splice_match	RPL15	ENST00000435882.6	1063	4	17	41	0	-41	multi-exon	FALSE	canonical	1	3978	junction_2	1658470.5600186777	NA	4	1	TRUE	NA	NA	NA	C	coding	204	615	103	717	35.0	0	True	AATAAA	-17
PB.7978.2	chr3	+	2155	4	full-splice_match	RPL15	ENST00000307839.9	2730	4	585	-10	-1	-2	multi-exon	FALSE	canonical	1	3978	junction_2	1766260.5367885754	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	55	669	20.0	-2	True	CATAAA	-16
PB.7978.3	chr3	+	2068	4	full-splice_match	RPL15	ENST00000413699.7	2221	4	0	153	0	-20	multi-exon	FALSE	canonical	1	3978	junction_2	1658470.5600186777	NA	12	1	TRUE	NA	NA	NA	C	coding	204	615	119	733	45.0	0	True	AATAAA	-11
PB.7978.1	chr3	+	2683	3	full-splice_match	RPL15	ENST00000354811.5	820	3	-575	-1288	-1	-17	multi-exon	FALSE	canonical	1	3978	junction_1	2005082.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	731	1345	40.0	-2	True	AATAAA	-14
PB.6911.10	chr2	+	5276	31	full-splice_match	MYO1B	ENST00000392318.7	5082	31	16	-210	16	205	multi-exon	FALSE	canonical	1	141532	junction_23	164409.09662783938	NA	5	1	TRUE	NA	NA	NA	C	coding	1136	3411	232	3642	30.0	-3	True	NA	NA
PB.2073.2	chr11	-	1575	4	full-splice_match	FOSL1	ENST00000312562.6	1669	4	93	1	-14	-1	multi-exon	FALSE	canonical	1	161674	junction_3	127925.4949943738	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	95	910	15.0	111	False	AATAAA	-16
PB.2073.1	chr11	-	3636	4	full-splice_match	FOSL1	ENST00000312562.6	1669	4	138	-2105	31	1934	multi-exon	FALSE	canonical	1	161674	junction_3	127925.4949943738	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	50	865	45.0	-1	True	NA	NA
PB.7978.9	chr3	+	2402	1	novel_in_catalog	RPL15	novel	2730	4	NA	NA	1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	coding	152	459	323	781	15.0	1	True	AATAAA	-15
PB.10346.1	chr6	-	3262	5	novel_in_catalog	PSMB1	novel	928	6	NA	NA	38	0	intron_retention	TRUE	canonical	1	2586933	junction_4	610161.4958518667	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	2764	3159	20.0	-5	True	ATTAAA	-20
PB.10346.2	chr6	-	4910	5	full-splice_match	PSMB1	ENST00000462957.1	1939	5	-2866	-105	34	0	multi-exon	FALSE	canonical	1	3050732	junction_2	408178.6675593177	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	4412	4807	20.0	-9	True	ATTAAA	-20
PB.10346.3	chr6	-	892	6	full-splice_match	PSMB1	ENST00000262193.6	928	6	34	2	34	-2	multi-exon	FALSE	canonical	1	2586933	junction_5	577800.9167839733	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	66	791	20.0	-9	True	ATTAAA	-18
PB.10346.4	chr6	-	3788	1	novel_in_catalog	PSMB1	novel	928	6	NA	NA	35	-14297	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-8	True	TATAAA	-11
PB.7883.4	chr22	-	2602	9	novel_in_catalog	MAPK12	novel	6248	26	NA	NA	-2	-8	intron_retention	FALSE	canonical	1	209562	junction_7	113595.07744258772	NA	0	NA	TRUE	NA	NA	NA	B	coding	197	594	721	1314	50.0	-1	True	ATTAAA	-16
PB.9085.2	chr4	-	2025	4	intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4956.342760095951	NA	3	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.9159.1	chr5	+	3261	4	incomplete-splice_match	PURPL	ENST00000505775.5	946	6	-22	6691	-7	1481	3prime_fragment	FALSE	canonical	1	8385	junction_2	17961.676443658223	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	237	539	25.0	-16	True	AATAAA	-21
PB.8127.12	chr3	+	2121	17	full-splice_match	RBM6	ENST00000442092.5	2260	17	138	1	5	0	multi-exon	FALSE	canonical	1	128123	junction_2	203819.23912124892	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	201	2006	15.0	-7	True	AATAAA	-16
PB.7883.3	chr22	-	2881	12	novel_not_in_catalog	MAPK12	novel	6248	26	NA	NA	-28	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	170904.28201953153	NA	1	NA	TRUE	NA	NA	NA	B	coding	186	561	1826	2386	0.0	-28	True	AATAGA	-14
PB.7883.2	chr22	-	2899	8	novel_in_catalog	MAPK12	novel	6248	26	NA	NA	-42	1	intron_retention	FALSE	canonical	1	248951	junction_7	101749.12682170591	NA	0	NA	TRUE	NA	NA	NA	B	coding	159	480	1303	1782	5.0	9144	False	AATAGA	-18
PB.3260.20	chr13	+	2692	10	full-splice_match	NAXD	ENST00000309957.2	2659	10	-34	1	-34	-1	multi-exon	FALSE	canonical	1	11097	junction_9	117993.49734792617	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	196	1221	30.0	50	False	ATTAAA	-19
PB.10045.2	chr6	+	1433	3	full-splice_match	BAG2	ENST00000370693.5	6651	3	320	4898	320	-4898	multi-exon	FALSE	canonical	1	297705	junction_1	63407.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	113	688	25.0	10	True	TATAAA	-21
PB.10045.3	chr6	+	3375	3	full-splice_match	BAG2	ENST00000370693.5	6651	3	319	2957	319	-2957	multi-exon	FALSE	canonical	1	297705	junction_1	63407.0	NA	26	NA	TRUE	NA	NA	NA	C	coding	191	576	114	689	45.0	9	True	AATAAA	-21
PB.10045.4	chr6	+	1647	3	full-splice_match	BAG2	ENST00000370693.5	6651	3	-29	5033	-29	-5033	multi-exon	FALSE	canonical	1	297705	junction_1	63407.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	402	1037	40.0	-29	True	CATAAA	-25
PB.7902.8	chr3	+	2246	8	full-splice_match	TRNT1	ENST00000251607.10	2276	8	35	-5	0	5	multi-exon	FALSE	canonical	1	147808	junction_1	32336.396590990098	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	155	1372	25.0	0	True	AATAAA	-20
PB.10158.3	chr6	+	3334	8	full-splice_match	AMD1	ENST00000368877.9	1605	8	-1	-1728	0	-2	multi-exon	FALSE	canonical	1	25829	junction_1	529423.9571701242	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	323	1240	15.0	-1	True	AATAAA	-26
PB.10158.2	chr6	+	3143	9	full-splice_match	AMD1	ENST00000368885.7	3438	9	13	282	-1	-273	multi-exon	FALSE	canonical	1	272137	junction_2	444856.59972147207	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	324	1328	5.0	-2	True	AATAGA	-13
PB.10158.1	chr6	+	3543	10	novel_not_in_catalog	AMD1	novel	3438	9	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	1285	junction_3	574674.0778220445	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	798	1451	20.0	-2	True	AATAAA	-24
PB.7902.6	chr3	+	2984	3	full-splice_match	TRNT1	ENST00000339437.10	976	3	-8	-2000	-8	927	multi-exon	FALSE	canonical	1	57094	junction_2	45357.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	1937	2782	85.0	-8	True	NA	NA
PB.10158.7	chr6	+	2989	8	incomplete-splice_match	AMD1	ENST00000368876.2	3040	9	11930	3	-781	-2	5prime_fragment	FALSE	canonical	1	272137	junction_1	475568.99158612615	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	98	895	15.0	NA	False	AATAAA	-26
PB.10158.6	chr6	+	4393	1	novel_in_catalog	AMD1	novel	3438	9	NA	NA	0	-14805	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	151	456	322	777	65.0	0	True	NA	NA
PB.10158.5	chr6	+	3104	6	full-splice_match	AMD1	ENST00000451850.6	3121	6	14	3	0	-2	multi-exon	FALSE	canonical	1	6807	junction_1	616411.990990636	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	459	1010	15.0	-1	True	AATAAA	-26
PB.10158.4	chr6	+	3059	5	full-splice_match	AMD1	ENST00000368882.7	3059	5	0	0	0	0	multi-exon	FALSE	canonical	1	7004	junction_1	688087.771174352	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	323	967	20.0	-1	True	AATAAA	-24
PB.5697.10	chr19	+	3178	5	incomplete-splice_match	ICAM1	ENST00000264832.7	3252	7	285	0	0	0	intron_retention	FALSE	canonical	1	308728	junction_1	95719.79397014757	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	41	1285	15.0	0	True	AATAAA	-16
PB.5697.11	chr19	+	3002	7	full-splice_match	ICAM1	ENST00000264832.7	3252	7	285	-35	0	35	multi-exon	FALSE	canonical	1	308728	junction_1	80521.66720085691	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	41	1639	20.0	0	True	NA	NA
PB.5697.12	chr19	+	2582	7	novel_not_in_catalog	ICAM1	novel	3252	7	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	191827.62112585755	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	41	1252	15.0	0	True	AATAAA	-18
PB.5697.13	chr19	+	2480	6	novel_not_in_catalog	ICAM1	novel	3252	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	206318.119805702	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	805	1152	15.0	0	True	AATAAA	-16
PB.5697.14	chr19	+	2252	6	incomplete-splice_match	ICAM1	ENST00000264832.7	3252	7	285	801	0	231	intron_retention	FALSE	canonical	1	308728	junction_1	85699.76643142033	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	41	1474	20.0	0	True	NA	NA
PB.5697.15	chr19	+	2898	8	novel_not_in_catalog	ICAM1	novel	3252	7	NA	NA	1	4	intron_retention	FALSE	non_canonical	0	0	junction_3	178387.667393923	NA	4	NA	TRUE	NA	NA	NA	C	coding	508	1527	40	1566	15.0	1	True	AATAAA	-20
PB.5697.16	chr19	+	2375	5	incomplete-splice_match	ICAM1	ENST00000264832.7	3252	7	286	802	1	230	intron_retention	FALSE	canonical	1	308728	junction_1	95719.79397014757	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	40	1284	20.0	1	True	NA	NA
PB.5697.17	chr19	+	2305	5	novel_not_in_catalog	ICAM1	novel	3252	7	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	221474.68857862742	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	630	977	15.0	1	True	AATAAA	-16
PB.5697.18	chr19	+	2290	5	novel_not_in_catalog	ICAM1	novel	3252	7	NA	NA	1	4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	221474.68857862742	NA	3	1	TRUE	NA	NA	NA	C	coding	115	348	611	958	15.0	1	True	AATAAA	-20
PB.5697.19	chr19	+	2700	6	novel_in_catalog	ICAM1	novel	3252	7	NA	NA	2	-1	intron_retention	FALSE	canonical	1	707	junction_1	206039.5940032886	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	39	1373	15.0	2	True	AATAAA	-15
PB.5812.7	chr19	+	7589	40	full-splice_match	MYO9B	ENST00000595618.5	7623	40	22	12	17	-1	multi-exon	FALSE	canonical	1	43760	junction_39	139913.41184064123	NA	1	NA	TRUE	NA	NA	NA	C	coding	2022	6069	131	6199	20.0	26	True	AATAAA	-11
PB.5812.6	chr19	+	6887	39	novel_in_catalog	MYO9B	novel	7623	40	NA	NA	17	542	combination_of_known_junctions	FALSE	canonical	1	75342	junction_38	140874.56509312807	NA	1	NA	TRUE	NA	NA	NA	C	coding	2141	6426	131	6556	40.0	26	True	TTTAAA	-13
PB.5812.1	chr19	+	7570	39	novel_in_catalog	MYO9B	novel	7623	40	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	43760	junction_38	143387.14603909288	NA	1	1	TRUE	NA	NA	NA	C	coding	2005	6018	152	6169	20.0	5	True	AATAAA	-22
PB.5812.3	chr19	+	7656	38	novel_in_catalog	MYO9B	novel	7623	40	NA	NA	11	0	intron_retention	FALSE	canonical	1	90299	junction_1	129103.26061250968	NA	0	NA	TRUE	NA	NA	NA	C	coding	2006	6021	137	6157	20.0	20	True	AATAAA	-12
PB.1654.1	chr10	-	6372	22	full-splice_match	GPAM	ENST00000348367.8	6371	22	-3	2	-3	-2	multi-exon	FALSE	canonical	1	51312	junction_21	27956.20718178576	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	202	2688	15.0	-7	True	AATAAA	-16
PB.5903.3	chr19	+	570	6	full-splice_match	PDCD5	ENST00000590247.6	699	6	121	8	-12	5	multi-exon	FALSE	canonical	1	542282	junction_5	471093.03988295136	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	74	451	40.0	-1	True	AATAAA	-14
PB.1654.3	chr10	-	5106	22	full-splice_match	GPAM	ENST00000348367.8	6371	22	3	1262	3	-1262	multi-exon	FALSE	canonical	1	51312	junction_21	27956.20718178576	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	196	2682	80.0	-1	True	NA	NA
PB.5903.1	chr19	+	6264	1	novel_in_catalog	PDCD5	novel	699	6	NA	NA	-48	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-321	False	AATAAA	-11
PB.5903.6	chr19	+	3282	5	novel_in_catalog	PDCD5	novel	699	6	NA	NA	-10	2	intron_retention	FALSE	canonical	1	542282	junction_4	523806.048774019	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	2771	3166	55.0	1	True	AATAAA	-11
PB.5903.7	chr19	+	2636	3	incomplete-splice_match	PDCD5	ENST00000419343.7	1799	4	-4	-29	-4	2	intron_retention	FALSE	canonical	1	1325363	junction_2	308756.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	7	True	AATAAA	-11
PB.5678.9	chr19	+	2311	15	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-2	4	intron_retention	FALSE	canonical	1	10	junction_3	773798.5364476535	NA	1	1	TRUE	NA	NA	NA	B	coding	610	1833	383	2215	35.0	0	True	TATAAA	-8
PB.4320.3	chr16	+	6959	24	full-splice_match	TNRC6A	ENST00000315183.11	8303	24	-2	1346	-2	89	multi-exon	FALSE	canonical	1	38958	junction_4	116668.94092175263	NA	11	NA	TRUE	NA	NA	NA	C	coding	1913	5742	150	5891	90.0	-17	True	NA	NA
PB.5678.7	chr19	+	2299	15	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	901710.22574937	NA	2	1	TRUE	NA	NA	NA	B	coding	553	1662	383	2044	20.0	0	True	AATAAA	-12
PB.5678.5	chr19	+	2417	14	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-2	0	intron_retention	FALSE	canonical	1	10	junction_3	915860.3388839583	NA	1	1	TRUE	NA	NA	NA	B	coding	592	1779	383	2161	20.0	0	True	AATAAA	-13
PB.5678.4	chr19	+	2421	14	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	789634.4764541863	NA	2	1	TRUE	NA	NA	NA	B	coding	606	1821	345	2165	20.0	-3	True	AATAAA	-13
PB.5678.3	chr19	+	2357	15	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	1021871.2739347958	NA	2	1	TRUE	NA	NA	NA	B	coding	561	1686	416	2101	20.0	-2336	False	AATAAA	-13
PB.5678.2	chr19	+	2472	15	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	3	0	intron_retention	FALSE	canonical	1	10	junction_3	773798.5364476535	NA	1	1	TRUE	NA	NA	NA	B	coding	610	1833	384	2216	20.0	-1	True	AATAAA	-13
PB.5678.1	chr19	+	2379	15	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	896399.7599703397	NA	7	2	TRUE	NA	NA	NA	B	coding	559	1680	444	2123	20.0	-2364	False	AATAAA	-13
PB.11609.1	chr9	+	2244	10	full-splice_match	OSTF1	ENST00000346234.6	1319	10	-62	-863	-62	863	multi-exon	FALSE	canonical	1	476906	junction_4	147753.89642690757	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	213	857	25.0	-1	True	AATAAA	-17
PB.9395.5	chr5	+	2210	15	incomplete-splice_match	YTHDC2	ENST00000515883.5	2629	17	-15	2550	0	-2550	3prime_fragment	FALSE	canonical	1	87984	junction_2	34147.60902616876	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2007	203	2209	70.0	-11	True	NA	NA
PB.9395.4	chr5	+	6308	30	full-splice_match	YTHDC2	ENST00000161863.8	6316	30	11	-3	0	2	multi-exon	FALSE	canonical	1	87984	junction_2	44539.11931419598	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	203	4495	20.0	-11	True	ATTAAA	-19
PB.9395.6	chr5	+	6387	29	incomplete-splice_match	YTHDC2	ENST00000161863.8	6316	30	18	2	7	-2	intron_retention	FALSE	canonical	1	87984	junction_2	43893.16973200328	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	196	4488	25.0	-4	True	ATTAAA	-14
PB.9395.1	chr5	+	5103	30	full-splice_match	YTHDC2	ENST00000161863.8	6316	30	19	1194	-7	-1194	multi-exon	FALSE	canonical	1	87984	junction_2	44539.11931419598	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	195	4487	55.0	-3	True	AATAAA	-34
PB.9395.3	chr5	+	4733	30	full-splice_match	YTHDC2	ENST00000161863.8	6316	30	11	1572	0	1111	multi-exon	FALSE	canonical	1	87984	junction_2	44539.11931419598	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	203	4495	30.0	-11	True	AATAAA	-20
PB.9395.2	chr5	+	1387	8	incomplete-splice_match	YTHDC2	ENST00000515883.5	2629	17	-16	17205	-1	12452	3prime_fragment	FALSE	canonical	1	87984	junction_2	31288.949650713716	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1182	204	1385	75.0	-12	True	AAGAAA	-5
PB.8480.9	chr3	+	3861	23	full-splice_match	MME	ENST00000360490.6	2360	23	-392	-1109	-14	13	multi-exon	FALSE	canonical	1	77116	junction_1	70591.68979116673	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	471	2723	35.0	3	True	AATAAA	-27
PB.10370.3	chr7	+	2070	2	full-splice_match	CHST12	ENST00000258711.7	15979	2	6	13903	6	1	multi-exon	FALSE	canonical	1	86620	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	130	1374	100.0	-17	True	NA	NA
PB.10370.2	chr7	+	4288	6	novel_not_in_catalog	CHST12	novel	2131	2	NA	NA	7	-274	any annotated donor/acceptor	FALSE	canonical	1	3170	junction_3	31561.598943019348	NA	4	1	TRUE	NA	NA	NA	C	coding	414	1245	157	1401	25.0	-44	False	AATAAA	-14
PB.10370.1	chr7	+	1576	2	full-splice_match	CHST12	ENST00000258711.7	15979	2	-22	14425	6	-521	multi-exon	FALSE	canonical	1	86620	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	coding	414	1245	158	1402	35.0	-45	False	AATATA	-19
PB.2906.11	chr12	-	4106	25	full-splice_match	ATXN2	ENST00000608853.5	4376	25	32	238	32	-1	multi-exon	FALSE	canonical	1	47199	junction_24	113800.7759857401	NA	1	NA	TRUE	NA	NA	NA	C	coding	1153	3462	285	3746	95.0	242	False	NA	NA
PB.2906.12	chr12	-	3891	24	novel_in_catalog	ATXN2	novel	2167	13	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	1	16753	junction_13	126150.68947911744	NA	1	NA	TRUE	NA	NA	NA	C	coding	1089	3270	262	3531	95.0	-3	True	NA	NA
PB.2906.13	chr12	-	3495	24	novel_not_in_catalog	ATXN2	novel	2167	13	NA	NA	-44	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_23	125501.71117752822	NA	6	1	TRUE	NA	NA	NA	C	coding	1020	3063	152	3214	95.0	694	False	NA	NA
PB.2906.14	chr12	-	4552	20	incomplete-splice_match	ATXN2	ENST00000389153.9	3854	25	-533	16505	-5	-361	3prime_fragment	FALSE	canonical	1	47199	junction_19	114946.0569614313	NA	4	1	TRUE	NA	NA	NA	C	coding	959	2880	322	3201	95.0	205	False	NA	NA
PB.2906.15	chr12	-	2066	15	incomplete-splice_match	ATXN2	ENST00000647305.1	3639	21	-2	19314	-2	-155	3prime_fragment	FALSE	canonical	1	47199	junction_14	67540.2120185842	NA	1	NA	TRUE	NA	NA	NA	C	coding	658	1974	91	2064	60.0	436	False	NA	NA
PB.2906.16	chr12	-	2112	15	novel_not_in_catalog	ATXN2	novel	3854	25	NA	NA	-32	-155	any annotated donor/acceptor	FALSE	canonical	1	13094	junction_4	85255.60732247158	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1836	275	2110	60.0	-16	True	NA	NA
PB.2906.17	chr12	-	2042	14	novel_in_catalog	ATXN2	novel	3854	25	NA	NA	-22	-155	combination_of_known_junctions	FALSE	canonical	1	16753	junction_3	86559.55303945679	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1776	265	2040	60.0	-6	True	NA	NA
PB.10051.7	chr6	+	2786	4	incomplete-splice_match	PHF3	ENST00000262043.7	8233	16	151	29162	-124	-5	3prime_fragment	FALSE	canonical	1	66273	junction_1	121866.77347643023	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	190	2400	20.0	-581	False	AATAAA	-17
PB.10051.6	chr6	+	2709	6	incomplete-splice_match	PHF3	ENST00000262043.7	8233	16	239	20789	-36	2	3prime_fragment	FALSE	canonical	1	66273	junction_1	111103.00149248895	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2607	102	2708	75.0	-37	True	NA	NA
PB.10051.5	chr6	+	6790	16	full-splice_match	PHF3	ENST00000262043.7	8233	16	-34	1477	-18	-450	multi-exon	FALSE	canonical	1	66273	junction_1	82768.80252285076	NA	2	NA	TRUE	NA	NA	NA	C	coding	2039	6120	375	6494	35.0	0	True	AATAAA	-20
PB.10051.4	chr6	+	2896	7	incomplete-splice_match	PHF3	ENST00000509876.5	7124	17	-30	19762	-30	2	3prime_fragment	FALSE	canonical	1	11191	junction_2	144038.98927373797	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2343	553	2895	75.0	-31	True	NA	NA
PB.10051.3	chr6	+	2412	5	incomplete-splice_match	PHF3	ENST00000481385.6	2787	6	280	3553	-8	2	3prime_fragment	FALSE	canonical	1	98851	junction_1	97616.55301068308	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2343	69	2411	75.0	-9	True	NA	NA
PB.10051.2	chr6	+	3899	13	novel_in_catalog	PHF3	novel	3700	12	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	1	98851	junction_1	70788.27596196045	NA	1	NA	TRUE	NA	NA	NA	C	coding	1170	3510	390	3899	60.0	-786	False	NA	NA
PB.10051.1	chr6	+	7014	15	novel_in_catalog	PHF3	novel	3700	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	98851	junction_1	68254.37219115844	NA	1	NA	TRUE	NA	NA	NA	C	coding	1951	5856	358	6213	35.0	12	True	AGTAAA	-23
PB.8493.7	chr3	+	2771	19	novel_not_in_catalog	GFM1	novel	3721	18	NA	NA	5	-171	any annotated donor/acceptor	FALSE	canonical	1	2286	junction_6	186770.35649543558	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	921	2510	45.0	6	True	AATAAA	-16
PB.8480.8	chr3	+	5626	23	novel_in_catalog	MME	novel	2854	23	NA	NA	27	-5	combination_of_known_junctions	FALSE	canonical	1	77072	junction_1	70598.69918792314	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	130	2382	20.0	13	True	AATAAA	-20
PB.8067.2	chr3	+	7001	8	full-splice_match	LIMD1	ENST00000273317.4	11331	8	-746	5076	-211	-5076	multi-exon	FALSE	canonical	1	158803	junction_1	33417.509638035015	NA	4	NA	TRUE	NA	NA	NA	C	coding	676	2031	768	2798	10.0	-2	True	ATTAAA	-17
PB.8067.3	chr3	+	6417	9	novel_not_in_catalog	LIMD1	novel	676	8	NA	NA	-209	-5076	any annotated donor/acceptor	FALSE	canonical	1	28	junction_8	68861.97386609227	NA	3	NA	TRUE	NA	NA	NA	C	coding	676	2031	766	2796	10.0	0	True	ATTAAA	-17
PB.11093.12	chr8	-	2190	4	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	54856	junction_1	125644.58317633736	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	14	334	40.0	1	True	AATAAA	-15
PB.8067.1	chr3	+	6352	9	novel_not_in_catalog	LIMD1	novel	676	8	NA	NA	-218	-5076	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	68870.22506758182	NA	4	NA	TRUE	NA	NA	NA	C	coding	676	2031	775	2805	10.0	-9	True	ATTAAA	-17
PB.11093.14	chr8	-	2224	1	novel_in_catalog	PLPP5	novel	2130	7	NA	NA	0	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	6	True	NA	NA
PB.8493.5	chr3	+	2696	18	full-splice_match	GFM1	ENST00000486715.5	3721	18	295	730	-24	-54	multi-exon	FALSE	canonical	1	243185	junction_1	122751.98640564996	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	63	2318	65.0	46	True	NA	NA
PB.8067.4	chr3	+	6350	9	novel_not_in_catalog	LIMD1	novel	676	8	NA	NA	-209	-5076	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	68870.22506758182	NA	5	NA	TRUE	NA	NA	NA	C	coding	676	2031	766	2796	10.0	0	True	ATTAAA	-17
PB.8702.2	chr4	-	2638	17	incomplete-splice_match	BOD1L1	ENST00000040738.9	10565	26	28610	5	-5593	-5	5prime_fragment	FALSE	canonical	1	218170	junction_16	92713.79174204613	NA	0	NA	TRUE	NA	NA	NA	B	coding	413	1242	129	1370	45.0	9549	False	TATAAA	-16
PB.817.12	chr1	+	3184	12	full-splice_match	LMNA	ENST00000368300.8	3190	12	4	2	0	-2	multi-exon	FALSE	canonical	1	1221595	junction_11	3047718.3287420957	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	209	2203	0.0	0	True	AATACA	-20
PB.8702.1	chr4	-	4739	17	incomplete-splice_match	BOD1L1	ENST00000040738.9	10565	26	26510	4	-7693	-4	5prime_fragment	FALSE	canonical	1	218170	junction_16	92713.79174204613	NA	0	NA	TRUE	NA	NA	NA	B	coding	1128	3387	84	3470	45.0	7449	False	TATAAA	-17
PB.9159.5	chr5	+	1788	4	incomplete-splice_match	PURPL	ENST00000505775.5	946	6	-36	8178	-21	-6	3prime_fragment	FALSE	canonical	1	8385	junction_2	17961.676443658223	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	251	553	70.0	-30	True	ATTAAA	-3
PB.11808.3	chr9	-	2434	12	novel_not_in_catalog	ENG	novel	3048	15	NA	NA	-22	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	328079.1783955425	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	304	1806	15.0	-1	True	AATAAA	-16
PB.9657.1	chr5	-	791	4	full-splice_match	NHP2	ENST00000274606.7	865	4	67	7	-6	-7	multi-exon	FALSE	canonical	1	269990	junction_2	210214.22278396547	NA	0	NA	TRUE	NA	NA	NA	A	coding	153	462	84	545	25.0	-35	True	AGTAAA	-11
PB.11609.3	chr9	+	1294	10	full-splice_match	OSTF1	ENST00000346234.6	1319	10	-43	68	-43	-68	multi-exon	FALSE	canonical	1	476906	junction_4	147753.89642690757	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	194	838	5.0	-14	True	AATAAA	-17
PB.11166.1	chr8	+	1228	1	antisense	novelGene_MYBL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.8493.2	chr3	+	3092	19	full-splice_match	GFM1	ENST00000264263.9	3453	19	-70	431	-1	239	multi-exon	FALSE	canonical	1	15479	junction_6	185149.65270843063	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	109	2421	15.0	0	True	ATTAAA	-17
PB.1480.12	chr10	-	3376	9	novel_in_catalog	AP3M1	novel	5124	9	NA	NA	2	1196	no_combination_of_known_junctions	FALSE	canonical	1	2695	junction_5	220451.98149937324	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	216	1334	30.0	-21	True	AATAAA	-12
PB.5868.7	chr19	-	2147	4	full-splice_match	ZNF506	ENST00000540806.6	1424	4	-58	-665	0	665	multi-exon	FALSE	canonical	1	59684	junction_1	29018.10654669866	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	148	1482	50.0	-4	True	AATAAA	-22
PB.1480.10	chr10	-	3589	11	novel_not_in_catalog	AP3M1	novel	5124	9	NA	NA	16	1196	any annotated donor/acceptor	FALSE	canonical	1	105	junction_10	230980.37999310676	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	291	1547	30.0	-7	True	AATAAA	-12
PB.1480.11	chr10	-	3397	9	novel_not_in_catalog	AP3M1	novel	5124	9	NA	NA	15	1196	any annotated donor/acceptor	FALSE	canonical	1	14507	junction_2	215976.25277963866	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	77	1162	30.0	-8	True	AATAAA	-12
PB.9734.2	chr6	+	2162	5	full-splice_match	TMEM14B	ENST00000475942.5	992	5	0	-1170	0	-1	multi-exon	FALSE	canonical	1	16450	junction_2	124317.66178021529	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	122	529	15.0	0	True	AATAAA	-17
PB.1480.17	chr10	-	3515	10	novel_not_in_catalog	AP3M1	novel	5124	9	NA	NA	4	1195	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	200705.32778702903	NA	66	4	TRUE	NA	NA	NA	C	coding	418	1257	218	1474	30.0	-19	True	AATAAA	-11
PB.11002.2	chr8	-	8366	16	full-splice_match	PSD3	ENST00000327040.12	11689	16	-94	3417	-94	-7	multi-exon	FALSE	canonical	1	29872	junction_15	38680.45278064304	NA	4	NA	TRUE	NA	NA	NA	C	coding	1047	3144	198	3341	75.0	13	True	NA	NA
PB.5868.1	chr19	-	3355	4	full-splice_match	ZNF506	ENST00000540806.6	1424	4	-90	-1841	-31	-1739	multi-exon	FALSE	canonical	1	59684	junction_1	29018.10654669866	NA	3	NA	TRUE	NA	NA	NA	C	coding	444	1335	180	1514	25.0	1	True	AATAAA	-16
PB.1666.2	chr10	+	3379	8	full-splice_match	TRUB1	ENST00000298746.4	3408	8	31	-2	31	2	multi-exon	FALSE	canonical	1	181056	junction_4	36825.51651077978	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	31	1080	20.0	12	True	AATAAA	-22
PB.1666.3	chr10	+	4212	4	full-splice_match	TRUB1	ENST00000485065.1	584	4	-161	-3467	32	3467	multi-exon	FALSE	canonical	1	214605	junction_1	29122.238654029024	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	30	569	65.0	13	True	TATAAA	-7
PB.1480.18	chr10	-	3821	10	novel_in_catalog	AP3M1	novel	5124	9	NA	NA	29	1195	no_combination_of_known_junctions	FALSE	canonical	1	8151	junction_9	195646.1701873759	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	524	1780	30.0	309	False	AATAAA	-11
PB.1480.19	chr10	-	3749	10	novel_not_in_catalog	AP3M1	novel	5124	9	NA	NA	-7	1179	any annotated donor/acceptor	FALSE	canonical	1	14507	junction_2	207457.01500888096	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	446	1531	65.0	-33	False	AGTAAA	-29
PB.1666.4	chr10	+	5426	7	novel_in_catalog	TRUB1	novel	3408	8	NA	NA	35	-1	intron_retention	FALSE	canonical	1	181056	junction_4	39039.86730431968	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	27	809	30.0	16	True	AATAAA	-19
PB.1666.5	chr10	+	3305	9	novel_not_in_catalog	TRUB1	novel	3408	8	NA	NA	42	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83499.9368978055	NA	3	NA	TRUE	NA	NA	NA	C	coding	329	990	20	1009	30.0	23	True	AATAAA	-19
PB.8077.1	chr3	+	5309	25	novel_in_catalog	PTPN23	novel	5119	24	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	1	21706	junction_5	95646.86862839089	NA	2	NA	TRUE	NA	NA	NA	C	coding	1626	4881	179	5059	5.0	-108	False	AATAAA	-16
PB.8077.3	chr3	+	5234	25	full-splice_match	PTPN23	ENST00000265562.4	5244	25	4	6	4	0	multi-exon	FALSE	canonical	1	180890	junction_2	76261.69840984508	NA	0	NA	TRUE	NA	NA	NA	C	coding	1636	4911	74	4984	5.0	-3	True	AATAAA	-16
PB.8077.2	chr3	+	5314	24	incomplete-splice_match	PTPN23	ENST00000265562.4	5244	25	2	6	2	0	intron_retention	FALSE	canonical	1	180890	junction_2	71877.54127605062	NA	4	NA	TRUE	NA	NA	NA	C	coding	1662	4989	76	5064	5.0	-5	True	AATAAA	-16
PB.8077.4	chr3	+	4993	25	novel_not_in_catalog	PTPN23	novel	5119	24	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	139	junction_3	125964.70818562608	NA	7	2	TRUE	NA	NA	NA	C	coding	1118	3357	1387	4743	5.0	0	True	AATAAA	-16
PB.9386.20	chr5	-	3757	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-65	914	-13	0	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	201	818	70.0	468	False	TTTAAA	-10
PB.11609.2	chr9	+	3358	10	full-splice_match	OSTF1	ENST00000346234.6	1319	10	-46	-1993	-46	1993	multi-exon	FALSE	canonical	1	476906	junction_4	147753.89642690757	NA	3	NA	TRUE	NA	NA	NA	C	coding	214	645	197	841	95.0	-17	False	NA	NA
PB.177.41	chr1	+	2339	8	incomplete-splice_match	SRRM1	ENST00000374389.8	3110	18	18010	-637	-5246	1	5prime_fragment	FALSE	canonical	1	132978	junction_7	126097.43132132682	NA	2	NA	TRUE	NA	NA	NA	C	coding	446	1341	22	1362	30.0	5523	False	AATAAA	-13
PB.1078.2	chr1	+	2646	10	novel_not_in_catalog	MAPKAPK2	novel	2171	10	NA	NA	662	-2	any annotated donor/acceptor	FALSE	canonical	1	2851	junction_1	405104.3296682967	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	160	1083	10.0	-9791	False	ACTAAA	-15
PB.525.6	chr1	-	4851	11	full-splice_match	GBP4	ENST00000355754.6	6127	11	-76	1352	-76	-2	multi-exon	FALSE	canonical	1	129336	junction_6	35510.65960187167	NA	2	NA	TRUE	NA	NA	NA	C	coding	640	1923	175	2097	90.0	2279	False	NA	NA
PB.263.8	chr1	-	2435	14	novel_not_in_catalog	YARS	novel	2247	4	NA	NA	-19	-6	intron_retention	FALSE	canonical	1	9181	junction_2	632801.2058352017	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	770	1462	25.0	21	True	AATAAA	-5
PB.11226.39	chr8	-	2481	16	novel_in_catalog	NBN	novel	4666	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	13638	junction_13	155028.6817051176	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	391	2331	30.0	-2	True	AATAAA	-16
PB.11461.1	chr9	-	2524	6	incomplete-splice_match	FREM1	ENST00000380880.3	7324	37	41168	110291	41168	-63415	internal_fragment	FALSE	canonical	1	16988	junction_4	1596.4491097432451	NA	1	NA	TRUE	NA	NA	NA	A	coding	427	1284	286	1569	20.0	7	False	AATAAA	-16
PB.8493.9	chr3	+	2885	17	novel_in_catalog	GFM1	novel	3721	18	NA	NA	11	239	no_combination_of_known_junctions	FALSE	canonical	1	69	junction_11	166760.80340940433	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	97	2214	15.0	12	True	ATTAAA	-17
PB.8601.1	chr3	+	4290	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-72	-131	-8	50	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	1	NA	TRUE	NA	NA	NA	C	coding	978	2937	171	3107	20.0	0	True	AATAAA	-41
PB.8601.2	chr3	+	4208	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	33	2156	1	3	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	160	3153	55.0	11	True	AATAAA	-19
PB.969.6	chr1	+	4246	15	full-splice_match	XPR1	ENST00000367590.8	8474	15	125	4103	97	22	multi-exon	FALSE	canonical	1	188467	junction_7	36179.713793838695	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	74	2164	20.0	-6	True	AATAAA	-41
PB.591.2	chr1	-	6932	20	full-splice_match	SORT1	ENST00000256637.7	7028	20	22	74	22	-74	multi-exon	FALSE	canonical	1	217162	junction_19	79487.46845688451	NA	2	1	TRUE	NA	NA	NA	C	coding	831	2496	38	2533	25.0	8	True	AATAAA	-21
PB.5224.4	chr17	-	2638	2	full-splice_match	CDC42EP4	ENST00000335793.3	3272	2	180	454	-2	-453	multi-exon	FALSE	canonical	1	268088	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	216	1286	15.0	-9	True	NA	NA
PB.5224.5	chr17	-	2133	2	full-splice_match	CDC42EP4	ENST00000335793.3	3272	2	150	989	-20	565	multi-exon	FALSE	canonical	1	268088	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	246	1316	45.0	-39	False	NA	NA
PB.8123.11	chr3	-	3479	22	novel_not_in_catalog	UBA7	novel	3299	24	NA	NA	-8	8	intron_retention	FALSE	canonical	1	6409	junction_14	115871.20994227828	NA	3	1	TRUE	NA	NA	NA	C	coding	438	1317	2071	3387	45.0	-9	True	NA	NA
PB.8123.10	chr3	-	6001	16	novel_in_catalog	UBA7	novel	3299	24	NA	NA	-5	-7	intron_retention	FALSE	canonical	1	239464	junction_14	94755.37372108361	NA	7	NA	TRUE	NA	NA	NA	C	coding	353	1062	151	1212	35.0	8	True	NA	NA
PB.591.9	chr1	-	3790	20	full-splice_match	SORT1	ENST00000256637.7	7028	20	33	3205	33	1026	multi-exon	FALSE	canonical	1	217162	junction_19	79487.46845688451	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	27	2522	55.0	-1	True	ATTAAA	-29
PB.5224.1	chr17	-	3102	2	full-splice_match	CDC42EP4	ENST00000335793.3	3272	2	170	0	0	0	multi-exon	FALSE	canonical	1	268088	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	226	1296	0.0	-19	True	ATTAAA	-18
PB.5224.2	chr17	-	3100	2	full-splice_match	CDC42EP4	ENST00000580315.1	1022	2	416	-2494	416	0	multi-exon	FALSE	canonical	1	39095	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	225	1295	5.0	994	False	ATTAAA	-17
PB.8601.5	chr3	+	3428	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	103	2797	0	-394	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	132	3014	40.0	39	True	AATAAA	-18
PB.758.2	chr1	-	2112	7	novel_not_in_catalog	THEM4	novel	2377	6	NA	NA	44	-1	any annotated donor/acceptor	FALSE	canonical	1	15260	junction_6	18280.678622219933	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	279	809	40.0	-1	True	NA	NA
PB.758.3	chr1	-	1612	6	full-splice_match	THEM4	ENST00000368814.7	2377	6	293	472	-13	-1	multi-exon	FALSE	canonical	1	24278	junction_4	15866.000912643363	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	58	780	15.0	-5	True	ATTAAA	-18
PB.11034.1	chr8	+	2674	10	full-splice_match	CHMP7	ENST00000517325.5	2639	10	-28	-7	-23	0	multi-exon	FALSE	canonical	1	14648	junction_1	161996.88877884258	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	324	1274	5.0	-27	False	ATTAAA	-18
PB.758.1	chr1	-	2087	6	full-splice_match	THEM4	ENST00000368814.7	2377	6	298	-8	-8	8	multi-exon	TRUE	canonical	1	24278	junction_4	15866.000912643363	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	53	775	30.0	0	True	NA	NA
PB.758.6	chr1	-	1471	7	full-splice_match	THEM4	ENST00000471464.5	1832	7	23	338	23	-16	multi-exon	FALSE	canonical	1	28323	junction_2	11163.424051587199	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	566	976	80.0	-1	True	NA	NA
PB.758.4	chr1	-	1846	7	full-splice_match	THEM4	ENST00000471464.5	1832	7	-16	2	-16	-2	multi-exon	FALSE	canonical	1	28323	junction_2	11163.424051587199	NA	5	NA	TRUE	NA	NA	NA	C	coding	136	411	605	1015	20.0	-8	True	ATTAAA	-17
PB.758.5	chr1	-	1298	6	full-splice_match	THEM4	ENST00000368814.7	2377	6	270	809	-36	-16	multi-exon	FALSE	canonical	1	24278	junction_4	15866.000912643363	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	81	803	80.0	-1	True	NA	NA
PB.8990.5	chr4	-	2612	4	incomplete-splice_match	ELF2	ENST00000511184.5	1766	7	-19	21702	0	13478	3prime_fragment	FALSE	canonical	1	80134	junction_3	51413.84152368136	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	504	851	65.0	-1	True	TTTAAA	-15
PB.8990.4	chr4	-	2248	4	full-splice_match	ELF2	ENST00000514606.1	2219	4	-53	24	23	-24	multi-exon	FALSE	canonical	1	135090	junction_3	28186.659291232085	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	202	633	100.0	-70	False	AAGAAA	-20
PB.8126.1	chr3	-	2090	6	full-splice_match	MON1A	ENST00000296473.7	2370	6	276	4	18	-4	multi-exon	FALSE	canonical	1	97107	junction_4	32475.789550987054	NA	0	NA	TRUE	NA	NA	NA	A	coding	555	1668	275	1942	15.0	-4	True	ATTAAA	-21
PB.8990.1	chr4	-	2738	8	novel_not_in_catalog	ELF2	novel	510	2	NA	NA	-29	9640	any annotated donor/acceptor	FALSE	canonical	1	3416	junction_1	65061.365813753255	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	64	1665	30.0	-30	True	ATTAAA	-13
PB.8990.3	chr4	-	2759	10	full-splice_match	ELF2	ENST00000394235.6	4012	10	-4	1257	-4	242	multi-exon	FALSE	canonical	1	67257	junction_2	47883.440995354074	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	508	2253	55.0	-5	True	AATATA	-35
PB.8990.2	chr4	-	2293	7	full-splice_match	ELF2	ENST00000510408.5	1965	7	-86	-242	3	242	multi-exon	FALSE	canonical	1	67257	junction_2	44417.6945697195	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	222	1787	55.0	-90	False	AATATA	-35
PB.6917.1	chr2	-	6853	28	novel_not_in_catalog	HECW2	novel	12180	29	NA	NA	-47350	255	any annotated donor/acceptor	FALSE	canonical	1	437	junction_24	20144.781224738894	NA	1	NA	TRUE	NA	NA	NA	B	coding	1372	4119	454	4572	40.0	-20	False	AATAAA	-22
PB.8493.20	chr3	+	3280	17	incomplete-splice_match	GFM1	ENST00000486715.5	3721	18	1348	6	921	0	5prime_fragment	FALSE	canonical	1	324531	junction_12	112783.74657861209	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	148	2178	15.0	626	False	AATAAA	-13
PB.6917.3	chr2	-	6810	28	novel_in_catalog	HECW2	novel	12180	29	NA	NA	59	5	combination_of_known_junctions	FALSE	canonical	1	9346	junction_27	17916.05806787191	NA	3	NA	TRUE	NA	NA	NA	B	coding	1441	4326	454	4779	10.0	12	True	AATACA	-27
PB.6917.5	chr2	-	6607	28	novel_not_in_catalog	HECW2	novel	12180	29	NA	NA	-47349	3	any annotated donor/acceptor	FALSE	canonical	1	5437	junction_27	18245.422038364162	NA	0	NA	TRUE	NA	NA	NA	B	coding	1441	4326	253	4578	10.0	-19	False	AATACA	-25
PB.6917.6	chr2	-	6631	28	novel_not_in_catalog	HECW2	novel	12180	29	NA	NA	-47356	-1	any annotated donor/acceptor	FALSE	canonical	1	5437	junction_27	18933.947091715432	NA	0	NA	TRUE	NA	NA	NA	B	coding	1448	4347	260	4606	20.0	-26	False	AATACA	-21
PB.6917.7	chr2	-	6847	28	novel_in_catalog	HECW2	novel	12180	29	NA	NA	35	2	combination_of_known_junctions	FALSE	canonical	1	9346	junction_27	18620.054741122924	NA	0	NA	TRUE	NA	NA	NA	B	coding	1448	4347	478	4824	20.0	-12	False	AATACA	-19
PB.6917.8	chr2	-	5015	28	novel_not_in_catalog	HECW2	novel	12180	29	NA	NA	-47349	-1489	any annotated donor/acceptor	FALSE	canonical	1	5437	junction_27	18245.422038364162	NA	2	1	TRUE	NA	NA	NA	B	coding	1441	4326	253	4578	40.0	-19	False	AATAAA	-18
PB.6917.9	chr2	-	2297	1	novel_in_catalog	HECW2	novel	12180	29	NA	NA	-47300	-63529	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.10348.6	chr6	-	2677	3	full-splice_match	PDCD2	ENST00000453163.6	2657	3	-30	10	3	-10	multi-exon	FALSE	canonical	1	482838	junction_1	51606.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	62	748	40.0	-15	True	NA	NA
PB.10348.7	chr6	-	1233	4	full-splice_match	PDCD2	ENST00000614056.4	1287	4	62	-8	15	5	multi-exon	FALSE	canonical	1	172196	junction_1	175887.38081132105	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	50	715	15.0	-3	True	NA	NA
PB.10348.4	chr6	-	1407	7	novel_not_in_catalog	PDCD2	novel	3378	6	NA	NA	-3	305	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	224563.08285349724	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	38	979	45.0	9	True	AATAAA	-17
PB.10348.5	chr6	-	1317	6	full-splice_match	PDCD2	ENST00000541970.5	3378	6	-7	2068	-7	73	multi-exon	FALSE	canonical	1	200354	junction_2	172131.31769134864	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	87	1121	35.0	-7	False	NA	NA
PB.10348.2	chr6	-	3042	6	full-splice_match	PDCD2	ENST00000541970.5	3378	6	17	319	2	-286	multi-exon	FALSE	canonical	1	200354	junction_2	172131.31769134864	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	63	1097	75.0	-16	True	AATAAA	-12
PB.10348.3	chr6	-	1537	6	full-splice_match	PDCD2	ENST00000541970.5	3378	6	14	1827	-1	314	multi-exon	FALSE	canonical	1	200354	junction_2	172131.31769134864	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	66	1100	35.0	14	False	AATAAA	-26
PB.11013.4	chr8	+	4019	18	novel_not_in_catalog	FAM160B2	novel	917	3	NA	NA	1	1	intron_retention	FALSE	canonical	1	20079	junction_2	114229.04497961549	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	513	2570	5.0	10	True	AATAAA	-18
PB.10348.1	chr6	-	3808	6	full-splice_match	PDCD2	ENST00000541970.5	3378	6	23	-453	8	453	multi-exon	FALSE	canonical	1	200354	junction_2	172131.31769134864	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	57	1091	45.0	-10	True	NA	NA
PB.8506.11	chr3	-	2549	2	incomplete-splice_match	BCHE	ENST00000264381.7	2454	4	-11	55759	-11	-50389	3prime_fragment	FALSE	canonical	1	62712	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	56	1699	70.0	-64	False	AGTAAA	-22
PB.10348.8	chr6	-	2024	3	full-splice_match	PDCD2	ENST00000453163.6	2657	3	-24	657	9	-1	multi-exon	FALSE	canonical	1	482838	junction_1	51606.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	56	742	15.0	-9	True	NA	NA
PB.10348.9	chr6	-	1879	4	novel_not_in_catalog	PDCD2	novel	3378	6	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	255438.8885850304	NA	0	NA	TRUE	NA	NA	NA	C	coding	26	81	517	597	15.0	38	True	NA	NA
PB.2911.1	chr12	+	2254	14	full-splice_match	MAPKAPK5	ENST00000550735.6	11349	14	17	9078	17	-1	multi-exon	FALSE	canonical	1	194790	junction_1	101858.99296466241	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	758	2155	30.0	-233	False	AATAAA	-19
PB.2911.6	chr12	+	2114	15	novel_not_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	205	262	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	135833.0335416332	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	55	1752	15.0	0	True	AGTAAA	-22
PB.2911.7	chr12	+	1994	14	novel_not_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	221	255	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	157234.30524922704	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	332	1639	20.0	16	True	AGTAAA	-15
PB.2911.4	chr12	+	2262	14	full-splice_match	MAPKAPK5	ENST00000550735.6	11349	14	205	8882	205	195	multi-exon	FALSE	canonical	1	194790	junction_1	101858.99296466241	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	570	1967	50.0	0	True	AATAAA	-21
PB.2911.5	chr12	+	2120	13	novel_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	231	169	no_combination_of_known_junctions	FALSE	canonical	1	40285	junction_5	134081.02267462097	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	544	1851	70.0	-19	True	NA	NA
PB.2911.8	chr12	+	1827	15	novel_not_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	222	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	133786.37956268116	NA	4	2	TRUE	NA	NA	NA	C	coding	471	1416	315	1730	30.0	17	True	AATAAA	-17
PB.2911.9	chr12	+	2098	12	novel_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	232	251	no_combination_of_known_junctions	FALSE	canonical	1	18685	junction_4	145996.09073023975	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	866	1747	20.0	-18	True	AGTAAA	-11
PB.7339.7	chr20	-	5644	40	novel_not_in_catalog	PREX1	novel	4682	22	NA	NA	1220	-820	any annotated donor/acceptor	TRUE	canonical	1	71	junction_39	104939.20929141513	NA	2	1	TRUE	NA	NA	NA	A	coding	1484	4455	377	4831	75.0	1335	False	NA	NA
PB.6907.7	chr2	+	4320	9	novel_not_in_catalog	NAB1	novel	590	2	NA	NA	30	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78098.15145529615	NA	3	1	TRUE	NA	NA	NA	C	coding	487	1464	425	1888	30.0	-5	True	AATAAA	-18
PB.6907.6	chr2	+	3404	8	full-splice_match	NAB1	ENST00000409581.5	2360	8	28	-1072	28	718	multi-exon	FALSE	canonical	1	63796	junction_1	63300.585072255024	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	283	1746	30.0	-7	True	AGTAAA	-36
PB.6907.4	chr2	+	3872	8	novel_in_catalog	NAB1	novel	590	2	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	1337	junction_1	75846.44304845178	NA	2	NA	TRUE	NA	NA	NA	C	coding	435	1308	133	1440	30.0	1	True	AATAAA	-18
PB.6907.3	chr2	+	4231	10	novel_not_in_catalog	NAB1	novel	590	2	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	666	junction_1	77422.59734888074	NA	2	1	TRUE	NA	NA	NA	C	coding	487	1464	335	1798	25.0	-7	True	AATAAA	-19
PB.6907.2	chr2	+	4018	8	novel_in_catalog	NAB1	novel	590	2	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	1	1784	junction_1	75741.63411390659	NA	1	1	TRUE	NA	NA	NA	C	coding	487	1464	119	1582	20.0	-22	True	AATAAA	-22
PB.6907.1	chr2	+	4088	10	novel_not_in_catalog	NAB1	novel	590	2	NA	NA	-24	-1	any annotated donor/acceptor	FALSE	canonical	1	1574	junction_3	82193.1053731935	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	268	1656	30.0	-24	True	AATAAA	-18
PB.870.3	chr1	-	1933	6	full-splice_match	DEDD	ENST00000368006.7	2345	6	54	358	-26	-355	multi-exon	FALSE	canonical	1	177943	junction_5	121719.54897977563	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	162	1118	5.0	-16	True	AATAAA	-14
PB.870.2	chr1	-	2313	6	full-splice_match	DEDD	ENST00000458050.6	2300	6	-9	-4	1	1	multi-exon	FALSE	canonical	1	48852	junction_5	167886.7314630909	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	183	1139	25.0	305	False	AATAAA	-21
PB.870.1	chr1	-	2358	6	full-splice_match	DEDD	ENST00000368006.7	2345	6	-4	-9	-4	9	multi-exon	FALSE	canonical	1	177943	junction_5	121719.54897977563	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	220	1176	30.0	-6	True	AATAAA	-29
PB.559.1	chr1	+	1855	10	novel_in_catalog	SNX7	novel	1589	8	NA	NA	-2	1	combination_of_known_junctions	TRUE	canonical	1	19593	junction_2	69384.61187672633	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	330	1487	15.0	-2	True	AATAAA	-14
PB.870.6	chr1	-	1657	6	full-splice_match	DEDD	ENST00000368006.7	2345	6	7	681	6	89	multi-exon	FALSE	canonical	1	177943	junction_5	121719.54897977563	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	209	1165	35.0	5	True	NA	NA
PB.6907.9	chr2	+	4038	8	full-splice_match	NAB1	ENST00000409581.5	2360	8	169	-1847	6	0	multi-exon	FALSE	canonical	1	63796	junction_1	63300.585072255024	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	142	1605	25.0	-564	False	AATAAA	-19
PB.6907.8	chr2	+	2102	8	full-splice_match	NAB1	ENST00000409581.5	2360	8	33	225	33	-225	multi-exon	FALSE	canonical	1	63796	junction_1	63300.585072255024	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	278	1741	35.0	-2	True	AGTAAA	-28
PB.2932.3	chr12	-	4340	6	novel_not_in_catalog	C12orf49	novel	8404	5	NA	NA	41	-3301	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	114967.90090455684	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	121	738	15.0	14	True	NA	NA
PB.2932.2	chr12	-	5242	5	full-splice_match	C12orf49	ENST00000261318.4	8404	5	25	3137	25	-3137	multi-exon	FALSE	canonical	1	169664	junction_4	58572.09227097833	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	137	754	5.0	-2	True	NA	NA
PB.2932.1	chr12	-	4524	6	novel_not_in_catalog	C12orf49	novel	8404	5	NA	NA	22	-3136	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	114967.90090455684	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	140	757	5.0	-5	True	NA	NA
PB.10864.14	chr7	-	3234	16	novel_not_in_catalog	WDR91	novel	4500	15	NA	NA	8	540	any annotated donor/acceptor	FALSE	canonical	1	4054	junction_7	70875.21665807371	NA	2	1	TRUE	NA	NA	NA	C	coding	766	2301	25	2325	40.0	-9	True	NA	NA
PB.10864.13	chr7	-	3164	15	full-splice_match	WDR91	ENST00000354475.4	4588	15	21	1403	21	540	multi-exon	FALSE	canonical	1	108881	junction_10	40237.88265802539	NA	16	NA	TRUE	NA	NA	NA	C	coding	747	2244	12	2255	40.0	4	True	NA	NA
PB.10864.12	chr7	-	4140	15	full-splice_match	WDR91	ENST00000466182.5	3594	15	-6	-540	-6	540	multi-exon	FALSE	canonical	1	25692	junction_8	54312.77955471607	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	2221	3231	40.0	-23	True	NA	NA
PB.2932.4	chr12	-	2779	5	full-splice_match	C12orf49	ENST00000261318.4	8404	5	23	5602	23	1283	multi-exon	FALSE	canonical	1	169664	junction_4	58572.09227097833	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	139	756	25.0	-4	True	NA	NA
PB.9386.21	chr5	-	3047	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-53	1612	-1	-698	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	5	1	TRUE	NA	NA	NA	C	coding	205	618	189	806	75.0	0	True	NA	NA
PB.11549.14	chr9	+	4823	7	full-splice_match	DCAF10	ENST00000377724.7	3862	7	297	-1258	245	1258	multi-exon	FALSE	canonical	1	129259	junction_1	29655.222495371705	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	69	1748	95.0	2	True	NA	NA
PB.7692.9	chr22	-	2728	20	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	6047	junction_18	186114.1633017107	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	398	2329	30.0	17	True	AATAAA	-16
PB.7692.8	chr22	-	2781	20	full-splice_match	ASCC2	ENST00000307790.7	2793	20	6	6	4	-1	multi-exon	FALSE	canonical	1	119983	junction_19	156957.44804759088	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	109	2382	30.0	0	True	AATAAA	-16
PB.2260.5	chr11	-	2626	7	novel_in_catalog	SLC35F2	novel	3170	8	NA	NA	0	-7	no_combination_of_known_junctions	FALSE	canonical	1	3323	junction_3	86741.23216722764	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	42	620	35.0	399	False	ATTAAA	-18
PB.2260.4	chr11	-	2745	8	novel_not_in_catalog	SLC35F2	novel	3170	8	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	1926	junction_3	87439.77387963928	NA	5	NA	TRUE	NA	NA	NA	C	coding	236	711	42	752	35.0	399	False	ATTAAA	-18
PB.7692.3	chr22	-	2624	19	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	38628	junction_17	189523.12486181152	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	110	2224	25.0	-1	True	AATAAA	-17
PB.2260.6	chr11	-	2464	8	full-splice_match	SLC35F2	ENST00000525815.5	3170	8	367	339	-13	-339	multi-exon	FALSE	canonical	1	107251	junction_7	59632.89176730081	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	55	1179	50.0	3	True	AAGAAA	-25
PB.2260.1	chr11	-	2590	7	full-splice_match	SLC35F2	ENST00000533664.1	1007	7	23	-1606	14	-1	multi-exon	FALSE	canonical	1	2268	junction_6	99681.61491078595	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	287	967	15.0	1	True	ATTAAA	-24
PB.2260.3	chr11	-	2784	8	full-splice_match	SLC35F2	ENST00000525815.5	3170	8	379	7	-1	-7	multi-exon	FALSE	canonical	1	107251	junction_7	59632.89176730081	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	43	1167	35.0	398	False	ATTAAA	-18
PB.2260.2	chr11	-	3381	7	novel_in_catalog	SLC35F2	novel	3170	8	NA	NA	-10	-7	intron_retention	FALSE	canonical	1	107251	junction_6	50737.23521049955	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	52	786	35.0	6	True	ATTAAA	-18
PB.563.2	chr1	-	3762	16	novel_in_catalog	AC093019.2	novel	384	2	NA	NA	-48446	-25573	no_combination_of_known_junctions	FALSE	canonical	1	2804	junction_14	33508.35013439022	NA	1	NA	TRUE	NA	NA	NA	A	coding	490	1473	525	1997	55.0	12	True	AATAAA	-25
PB.563.1	chr1	-	3841	17	full-splice_match	SASS6	ENST00000287482.5	3880	17	39	0	39	0	multi-exon	TRUE	canonical	1	82975	junction_5	18995.175333880015	NA	9	NA	TRUE	NA	NA	NA	A	coding	657	1974	103	2076	55.0	13	True	AATAAA	-25
PB.2563.1	chr12	+	5440	1	antisense	novelGene_SLC38A1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	1800	False	NA	NA
PB.11549.15	chr9	+	1938	5	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	245	566	combination_of_known_junctions	FALSE	canonical	1	46603	junction_2	70893.75572070858	NA	4	NA	TRUE	NA	NA	NA	C	coding	456	1371	69	1439	25.0	2	True	AATAAA	-20
PB.4764.6	chr17	-	3882	23	full-splice_match	CTC1	ENST00000315684.13	7072	23	39	3151	-12	10	multi-exon	FALSE	canonical	1	68829	junction_22	37055.1820303124	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	21	3674	20.0	-3	True	NA	NA
PB.4764.4	chr17	-	4466	22	novel_not_in_catalog	CTC1	novel	7072	23	NA	NA	-9	119	intron_retention	FALSE	canonical	1	13686	junction_2	45039.663177049195	NA	2	NA	TRUE	NA	NA	NA	C	coding	665	1998	18	2015	15.0	0	True	AATGAA	-19
PB.4764.5	chr17	-	4048	23	full-splice_match	CTC1	ENST00000315684.13	7072	23	28	2996	-23	119	multi-exon	FALSE	canonical	1	68829	junction_22	37055.1820303124	NA	1	NA	TRUE	NA	NA	NA	C	coding	1217	3654	32	3685	15.0	-14	False	AATGAA	-19
PB.4764.2	chr17	-	3862	22	novel_in_catalog	CTC1	novel	7072	23	NA	NA	-1	121	intron_retention	FALSE	canonical	1	3087	junction_21	45114.71252147897	NA	0	NA	TRUE	NA	NA	NA	C	coding	918	2757	741	3497	15.0	10	True	AATGAA	-21
PB.4764.3	chr17	-	4808	20	novel_in_catalog	CTC1	novel	7072	23	NA	NA	-9	119	intron_retention	FALSE	canonical	1	68829	junction_19	36210.46800897999	NA	2	1	TRUE	NA	NA	NA	C	coding	665	1998	18	2015	15.0	0	True	AATGAA	-19
PB.4764.1	chr17	-	3979	22	novel_in_catalog	CTC1	novel	7072	23	NA	NA	-11	127	intron_retention	TRUE	canonical	1	9112	junction_3	44781.57216287392	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	20	3220	15.0	-2	True	AATGAA	-27
PB.7575.3	chr21	-	6333	29	full-splice_match	MCM3AP	ENST00000397708.1	6333	29	7	-7	7	0	multi-exon	FALSE	canonical	1	6807	junction_28	133742.25372210194	NA	0	NA	TRUE	NA	NA	NA	C	coding	1980	5943	249	6191	40.0	321	False	GATAAA	-22
PB.8563.2	chr3	+	7657	33	novel_not_in_catalog	EIF4G1	novel	5516	33	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	91744	junction_32	825131.7461004712	NA	1	NA	TRUE	NA	NA	NA	C	coding	1572	4719	236	4954	15.0	-75	True	ATTAAA	-14
PB.7575.1	chr21	-	6617	29	novel_not_in_catalog	MCM3AP	novel	6193	28	NA	NA	-51	-2	any annotated donor/acceptor	FALSE	canonical	1	71249	junction_28	127375.79561319985	NA	23	NA	TRUE	NA	NA	NA	C	coding	1980	5943	542	6484	20.0	29	True	GATAAA	-13
PB.7575.7	chr21	-	6527	29	novel_not_in_catalog	MCM3AP	novel	6193	28	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	8685	junction_18	146764.73277457216	NA	0	NA	TRUE	NA	NA	NA	C	coding	1928	5787	607	6393	25.0	-4	True	GATAAA	-14
PB.8563.6	chr3	+	5415	32	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	33982	junction_1	753358.2081753195	NA	0	NA	TRUE	NA	NA	NA	C	coding	1599	4800	172	4971	10.0	-68	True	ATTAAA	-15
PB.7575.5	chr21	-	6756	29	novel_in_catalog	MCM3AP	novel	6193	28	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	1	131473	junction_28	122186.61728321998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1980	5943	680	6622	25.0	-5	True	GATAAA	-14
PB.6284.2	chr2	-	1799	10	novel_in_catalog	SH3YL1	novel	500	2	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	1	4636	junction_6	141273.61579258568	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	451	1134	25.0	-61	False	AATAAA	-23
PB.5214.4	chr17	+	5269	10	novel_not_in_catalog	MAP2K6	novel	13400	12	NA	NA	11721	3510	any annotated donor/acceptor	FALSE	canonical	1	14511	junction_1	40076.690581933035	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	166	1002	90.0	4	True	NA	NA
PB.5214.1	chr17	+	5558	12	full-splice_match	MAP2K6	ENST00000590474.6	13400	12	1	7841	1	3510	multi-exon	FALSE	canonical	1	83488	junction_1	21362.64466092836	NA	3	NA	TRUE	NA	NA	NA	C	coding	334	1005	287	1291	90.0	-19	True	NA	NA
PB.5214.3	chr17	+	1595	10	novel_not_in_catalog	MAP2K6	novel	13400	12	NA	NA	11687	-198	any annotated donor/acceptor	FALSE	canonical	1	14511	junction_1	40076.690581933035	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	200	1036	60.0	-30	False	AAGAAA	-31
PB.5214.2	chr17	+	5379	12	novel_in_catalog	MAP2K6	novel	13400	12	NA	NA	29	3510	combination_of_known_junctions	FALSE	canonical	1	13584	junction_1	37573.82029952273	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	276	1112	90.0	0	True	NA	NA
PB.8422.1	chr3	-	3663	17	novel_in_catalog	DZIP1L	novel	3493	16	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	1	12975	junction_16	7958.895053011049	NA	0	NA	TRUE	NA	NA	NA	A	coding	767	2304	536	2839	25.0	-42	True	NA	NA
PB.6843.1	chr2	+	2571	20	full-splice_match	MAP3K20	ENST00000375213.7	3741	20	-57	1227	34	0	multi-exon	FALSE	canonical	1	86866	junction_14	112294.71978094714	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	136	2538	95.0	-4	True	NA	NA
PB.2106.6	chr11	+	1862	14	novel_in_catalog	RPS6KB2	novel	569	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	348451	junction_1	168867.00519075562	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	53	901	10.0	0	True	ATTAAA	-20
PB.6628.5	chr2	-	2147	2	full-splice_match	DUSP2	ENST00000488952.1	773	2	-823	-551	0	-12	multi-exon	FALSE	canonical	1	688130	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	900	1502	60.0	-1	True	AATAAA	-15
PB.2106.4	chr11	+	2951	13	novel_in_catalog	RPS6KB2	novel	569	4	NA	NA	4	-3	intron_retention	FALSE	canonical	1	348451	junction_1	172255.61109025267	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	2098	2715	5.0	-7	True	ATTAAA	-18
PB.2106.5	chr11	+	2807	14	novel_in_catalog	RPS6KB2	novel	569	4	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	49123	junction_8	232154.42291853725	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	1952	2569	10.0	-6	True	ATTAAA	-20
PB.2106.2	chr11	+	1908	16	novel_in_catalog	RPS6KB2	novel	569	4	NA	NA	0	-3	combination_of_known_junctions	TRUE	canonical	1	25412	junction_5	261948.11201199543	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	824	1672	5.0	-34	True	ATTAAA	-18
PB.2106.3	chr11	+	1761	15	full-splice_match	RPS6KB2	ENST00000312629.9	1733	15	-31	3	10	-3	multi-exon	FALSE	canonical	1	348451	junction_1	163625.37195930656	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	77	1525	5.0	-24	True	ATTAAA	-18
PB.2106.1	chr11	+	1752	15	novel_in_catalog	RPS6KB2	novel	569	4	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	49123	junction_9	224631.924879164	NA	4	NA	TRUE	NA	NA	NA	C	coding	296	891	90	980	5.0	-37	True	ATTAAA	-18
PB.8910.5	chr4	-	1641	16	incomplete-splice_match	CENPE	ENST00000503705.5	3468	26	6	23589	6	5480	3prime_fragment	FALSE	canonical	1	80491	junction_12	12769.132083270186	NA	5	NA	TRUE	NA	NA	NA	B	coding	519	1557	84	1640	60.0	-17	True	NA	NA
PB.8910.4	chr4	-	3384	25	incomplete-splice_match	CENPE	ENST00000380026.7	8241	47	6	45426	6	-3	3prime_fragment	FALSE	canonical	1	44931	junction_9	18661.687315368814	NA	0	NA	TRUE	NA	NA	NA	B	coding	1100	3300	84	3383	70.0	-17	True	AAGAAA	-44
PB.8910.1	chr4	-	4197	29	incomplete-splice_match	CENPE	ENST00000380026.7	8241	47	-7	40253	-6	-763	3prime_fragment	FALSE	canonical	1	44931	junction_13	20486.213425006044	NA	0	NA	TRUE	NA	NA	NA	B	coding	1367	4101	97	4197	70.0	-30	False	NA	NA
PB.6628.7	chr2	-	2063	3	novel_in_catalog	DUSP2	novel	1688	4	NA	NA	0	-12	intron_retention	FALSE	canonical	1	398178	junction_2	144976.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	816	1418	60.0	-1	True	AATAAA	-15
PB.8910.3	chr4	-	3571	27	incomplete-splice_match	CENPE	ENST00000611174.4	8260	53	7	43270	6	1919	3prime_fragment	FALSE	canonical	1	40365	junction_11	20685.78826712312	NA	0	NA	TRUE	NA	NA	NA	B	coding	1162	3486	84	3569	65.0	-17	True	AATAGA	-7
PB.8910.2	chr4	-	3444	26	incomplete-splice_match	CENPE	ENST00000380026.7	8241	47	32	43530	-27	1893	3prime_fragment	FALSE	canonical	1	44931	junction_10	18786.902574463944	NA	2	NA	TRUE	NA	NA	NA	B	coding	1129	3387	58	3444	65.0	9	True	AAAACA	-44
PB.6628.6	chr2	-	2118	2	novel_not_in_catalog	DUSP2	novel	1688	4	NA	NA	-1	-12	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	C	coding	218	657	88	744	60.0	-2	True	AATAAA	-15
PB.573.1	chr1	+	3593	1	genic	AC093157.1	novel	NA	NA	NA	NA	-25	-51117	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	106	321	2	322	75.0	-54	True	NA	NA
PB.465.43	chr1	-	2428	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	29	4219	0	356	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	87	1250	30.0	31	False	TATAAA	-22
PB.8619.2	chr3	-	2833	1	incomplete-splice_match	UBXN7	ENST00000296328.8	10568	11	81979	1	65740	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	145	438	1376	1813	10.0	NA	False	AATAAA	-18
PB.6912.1	chr2	+	1947	7	full-splice_match	NABP1	ENST00000307834.9	1914	7	-39	6	20	-6	multi-exon	FALSE	canonical	1	60405	junction_4	168562.33361644653	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	477	782	40.0	-7585	False	AATAAA	-16
PB.7103.1	chr2	-	3563	1	full-splice_match	CAPN10-DT	ENST00000567819.1	4000	1	384	53	384	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	988	False	NA	NA
PB.3406.6	chr14	+	6280	23	full-splice_match	FANCM	ENST00000267430.9	7111	23	14	817	7	-1	multi-exon	FALSE	canonical	1	28937	junction_3	12327.469635394371	NA	0	NA	TRUE	NA	NA	NA	C	coding	2048	6147	72	6218	15.0	-3	True	ATTAAA	-16
PB.11877.1	chr9	-	2258	5	full-splice_match	SURF6	ENST00000372022.5	4447	5	189	2000	189	1032	multi-exon	TRUE	canonical	1	320420	junction_2	27116.108914951274	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	78	1163	30.0	-22	True	NA	NA
PB.9932.1	chr6	+	9040	58	full-splice_match	ITPR3	ENST00000605930.2	9029	58	-15	4	-15	-4	multi-exon	TRUE	canonical	1	138852	junction_1	104463.60510893345	NA	0	NA	TRUE	NA	NA	NA	C	coding	2671	8016	240	8255	30.0	-2	True	AATAAA	-18
PB.1250.1	chr1	+	1938	1	intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	581	False	NA	NA
PB.4136.1	chr16	+	2586	16	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-2	-2	intron_retention	TRUE	canonical	1	57618	junction_4	296537.4761021615	NA	16	NA	TRUE	NA	NA	NA	C	coding	397	1194	827	2020	15.0	-9184	False	NA	NA
PB.12321.1	chrX	-	1055	5	full-splice_match	CETN2	ENST00000370277.3	1454	5	43	356	43	-356	multi-exon	FALSE	canonical	1	369740	junction_4	225973.0296366969	NA	0	NA	TRUE	NA	NA	NA	A	coding	172	519	25	543	30.0	22	True	AGTAAA	-16
PB.4136.2	chr16	+	2411	19	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	3	6	intron_retention	FALSE	canonical	1	17402	junction_1	254555.79932870623	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	411	1886	30.0	-9179	False	ATTAAA	-25
PB.4136.5	chr16	+	2575	18	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	1	-2	intron_retention	FALSE	canonical	1	131615	junction_6	218345.45320366256	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	816	2009	15.0	-19	True	NA	NA
PB.4136.4	chr16	+	2654	17	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-5	7	intron_retention	FALSE	canonical	1	53670	junction_8	236267.3141352555	NA	3	NA	TRUE	NA	NA	NA	C	coding	397	1194	935	2128	35.0	-32	True	ATTAAA	-26
PB.4136.7	chr16	+	2490	17	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-2	6	intron_retention	FALSE	canonical	1	57618	junction_4	286226.17741688754	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	772	1965	30.0	-29	True	ATTAAA	-25
PB.4136.6	chr16	+	2501	17	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-4	7	intron_retention	FALSE	canonical	1	17402	junction_1	293298.81310852774	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	782	1975	35.0	-31	True	ATTAAA	-26
PB.4136.9	chr16	+	2503	17	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	2	7	intron_retention	FALSE	canonical	1	57618	junction_4	241039.94924317492	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	93	1061	35.0	-24	True	ATTAAA	-26
PB.4136.8	chr16	+	2650	17	novel_not_in_catalog	RHOT2	novel	2539	19	NA	NA	2	12	intron_retention	FALSE	non_canonical	0	0	junction_7	268224.6313132136	NA	5	1	TRUE	NA	NA	NA	C	coding	104	315	636	950	30.0	-24	True	ATTAAA	-31
PB.10866.13	chr7	+	3952	28	incomplete-splice_match	NUP205	ENST00000285968.10	6266	43	42949	16	3128	-8	5prime_fragment	FALSE	canonical	1	318850	junction_3	124674.14330848117	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3624	144	3767	75.0	NA	False	AATAAA	-9
PB.3623.6	chr14	-	1342	11	full-splice_match	ATXN3	ENST00000644486.1	6866	11	-24	5548	2	-6	multi-exon	FALSE	canonical	1	144590	junction_10	73039.93296279783	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	37	1122	40.0	-25	True	ATTAAA	-8
PB.3623.1	chr14	-	4382	11	full-splice_match	ATXN3	ENST00000558190.6	6927	11	8	2537	4	1697	multi-exon	FALSE	canonical	1	144590	junction_10	73039.93296279783	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	66	1151	30.0	-54	False	AATAAA	-26
PB.8619.1	chr3	-	4505	1	genic	UBXN7	novel	NA	NA	NA	NA	64071	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	coding	145	438	3045	3482	5.0	NA	False	AATAAA	-21
PB.3623.2	chr14	-	4265	10	full-splice_match	ATXN3	ENST00000359366.10	2572	10	6	-1699	-2	1699	multi-exon	FALSE	canonical	1	17700	junction_7	98079.11247911738	NA	4	NA	TRUE	NA	NA	NA	C	coding	263	792	241	1032	25.0	-21	True	AATAAA	-28
PB.4067.6	chr15	-	4383	23	novel_in_catalog	POLG	novel	4668	24	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	1	4601	junction_2	131387.76182364498	NA	1	NA	TRUE	NA	NA	NA	C	coding	1219	3660	315	3974	80.0	-26	True	GATAAA	-19
PB.4067.7	chr15	-	4374	23	novel_not_in_catalog	POLG	novel	4668	24	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	1	1236	junction_22	122036.43674400508	NA	1	NA	TRUE	NA	NA	NA	C	coding	1239	3720	246	3965	80.0	-26	True	GATAAA	-19
PB.4067.4	chr15	-	4201	22	novel_not_in_catalog	POLG	novel	4668	24	NA	NA	0	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	134804.0581225184	NA	3	NA	TRUE	NA	NA	NA	C	coding	587	1764	300	2063	50.0	-11	True	AATAAA	-8
PB.4067.5	chr15	-	4563	24	novel_in_catalog	POLG	novel	4668	24	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	66911	junction_3	134336.45039549764	NA	1	NA	TRUE	NA	NA	NA	C	coding	1168	3507	336	3842	80.0	-47	True	GATAAA	-19
PB.4067.2	chr15	-	4457	23	full-splice_match	POLG	ENST00000442287.6	4487	23	8	22	-6	-3	multi-exon	FALSE	canonical	1	139279	junction_22	104181.84700524154	NA	1	NA	TRUE	NA	NA	NA	C	coding	1239	3720	329	4048	80.0	-40	True	GATAAA	-19
PB.9127.1	chr5	-	2084	2	full-splice_match	MRPL36	ENST00000505059.6	610	2	-1477	3	50	1	multi-exon	FALSE	canonical	1	367875	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	103	312	1538	1849	30.0	348	False	ATTAAA	-13
PB.4067.1	chr15	-	4441	23	full-splice_match	POLG	ENST00000268124.9	4500	23	22	37	-1	-3	multi-exon	FALSE	canonical	1	66144	junction_22	113083.003130919	NA	1	NA	TRUE	NA	NA	NA	C	coding	1239	3720	313	4032	80.0	-12	True	GATAAA	-19
PB.9586.6	chr5	-	2784	18	incomplete-splice_match	GEMIN5	ENST00000285873.7	5397	28	10	17005	10	-12987	3prime_fragment	FALSE	canonical	1	120997	junction_16	45655.776999472975	NA	1	NA	TRUE	NA	NA	NA	C	coding	903	2712	67	2778	45.0	-1	True	ATTAAA	-10
PB.9932.6	chr6	+	3758	21	incomplete-splice_match	ITPR3	ENST00000605930.2	9029	58	63218	2	63218	-2	5prime_fragment	FALSE	canonical	1	272838	junction_2	105653.17850792516	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	20	2971	30.0	8316	False	AATAAA	-20
PB.8601.29	chr3	+	4029	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	148	2151	0	8	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	2	NA	TRUE	NA	NA	NA	C	coding	960	2883	87	2969	45.0	0	True	AATAAA	-24
PB.4067.8	chr15	-	4200	22	novel_not_in_catalog	POLG	novel	4668	24	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	141573.1808262774	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	319	2076	80.0	-18	True	GATAAA	-19
PB.8601.28	chr3	+	2854	28	novel_in_catalog	OPA1	novel	6384	30	NA	NA	-7	-687	no_combination_of_known_junctions	FALSE	canonical	1	9774	junction_1	144384.44442524368	NA	6	1	TRUE	NA	NA	NA	C	coding	836	2511	223	2733	50.0	1	True	AATAAA	-9
PB.1913.5	chr11	-	2560	19	novel_not_in_catalog	PHF21A	novel	8954	10	NA	NA	-253	151	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	102823.33043325235	NA	0	NA	TRUE	NA	NA	NA	B	coding	629	1890	383	2272	20.0	22	True	AATATA	-18
PB.10288.1	chr6	-	2228	5	full-splice_match	FBXO5	ENST00000367241.3	2221	5	-10	3	-10	-3	multi-exon	FALSE	canonical	1	35869	junction_4	146409.64951890978	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	392	1597	30.0	-11	True	AATAAA	-19
PB.1913.6	chr11	-	2619	19	novel_not_in_catalog	PHF21A	novel	8954	10	NA	NA	35	148	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	94712.48861921244	NA	1	NA	TRUE	NA	NA	NA	B	coding	680	2043	292	2334	20.0	-70	True	AATATA	-15
PB.1913.1	chr11	-	3608	18	novel_in_catalog	PHF21A	novel	8954	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	147595	junction_17	60185.35831428343	NA	1	NA	TRUE	NA	NA	NA	B	coding	681	2046	161	2206	35.0	14	True	ATTAAA	-17
PB.1913.3	chr11	-	3861	20	novel_not_in_catalog	PHF21A	novel	8954	10	NA	NA	-287	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	89148.86305174218	NA	0	NA	TRUE	NA	NA	NA	B	coding	681	2046	414	2459	35.0	-12	True	ATTAAA	-17
PB.702.6	chr1	-	5704	28	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	13140.143467573807	NA	3	NA	TRUE	NA	NA	NA	B	coding	942	2829	1359	4187	15.0	NA	False	ATTAAA	-15
PB.9259.1	chr5	-	1709	1	antisense	novelGene_ERBIN_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	TATAAA	-13
PB.8889.10	chr4	-	1719	6	novel_in_catalog	EIF4E	novel	11523	7	NA	NA	0	896	no_combination_of_known_junctions	FALSE	canonical	1	191	junction_1	31298.641226736985	NA	2	NA	TRUE	NA	NA	NA	C	coding	132	399	162	560	35.0	7	True	AATAAA	-27
PB.8889.11	chr4	-	1504	6	full-splice_match	EIF4E	ENST00000511644.5	686	6	-31	-787	1	707	multi-exon	FALSE	canonical	1	2712	junction_1	81053.409461663	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	21	497	25.0	0	True	AATAAA	-28
PB.8889.12	chr4	-	1641	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1508	8374	-1	707	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	18	671	25.0	3	True	AATAAA	-28
PB.8889.13	chr4	-	1742	7	full-splice_match	EIF4E	ENST00000280892.10	1097	7	60	-705	60	705	multi-exon	FALSE	canonical	1	191	junction_1	72406.60105957191	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	61	774	25.0	3617	False	AATAAA	-26
PB.8889.14	chr4	-	1735	8	full-splice_match	EIF4E	ENST00000505992.1	898	8	1	-838	1	705	multi-exon	FALSE	canonical	1	191	junction_1	78590.32225304037	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	21	767	25.0	0	True	AATAAA	-26
PB.8889.15	chr4	-	1745	8	novel_not_in_catalog	EIF4E	novel	11523	7	NA	NA	1	692	any annotated donor/acceptor	FALSE	canonical	1	14	junction_6	69312.03691117084	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	392	790	35.0	0	True	AATAAA	-13
PB.8889.16	chr4	-	1474	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1512	8537	0	544	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	14	667	15.0	7	True	TATAAA	-37
PB.8889.17	chr4	-	1598	8	full-splice_match	EIF4E	ENST00000504432.5	1132	8	2	-468	2	388	multi-exon	FALSE	canonical	1	191	junction_1	68052.49187358301	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	246	947	15.0	9	True	AATAAA	-15
PB.8889.18	chr4	-	1318	7	full-splice_match	EIF4E	ENST00000450253.6	11523	7	1512	8693	0	388	multi-exon	FALSE	canonical	1	191	junction_1	81602.06112882335	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	14	667	15.0	7	True	AATAAA	-15
PB.8889.19	chr4	-	1410	8	full-splice_match	EIF4E	ENST00000505992.1	898	8	8	-520	0	387	multi-exon	FALSE	canonical	1	191	junction_1	78590.32225304037	NA	3	NA	TRUE	NA	NA	NA	C	coding	248	747	14	760	15.0	7	True	AATAAA	-14
PB.658.1	chr1	+	2377	4	incomplete-splice_match	NBPF26	ENST00000624419.1	1133	6	-17	-973	-17	973	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	312	939	273	1211	40.0	NA	False	AATAAA	-32
PB.8905.3	chr4	+	1609	3	full-splice_match	CISD2	ENST00000650480.1	1643	3	30	4	30	1	multi-exon	FALSE	canonical	1	862008	junction_1	17540.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	64	471	30.0	-342	False	AATAAA	-18
PB.12017.9	chrX	-	3540	16	full-splice_match	DMD	ENST00000361471.8	2224	16	-46	-1270	-1	898	multi-exon	FALSE	canonical	1	46360	junction_7	35495.56380331992	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	125	1993	70.0	-2	True	AATATA	-2
PB.8905.1	chr4	+	2336	3	full-splice_match	CISD2	ENST00000650480.1	1643	3	-20	-673	-2	673	multi-exon	FALSE	canonical	1	862008	junction_1	17540.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	114	521	5.0	-20	True	GATAAA	-20
PB.11929.9	chr9	-	2433	11	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_10	125460.48797593609	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	1273	2103	55.0	-1	True	ATTAAA	-13
PB.12017.8	chrX	-	3221	6	novel_not_in_catalog	DMD	novel	621	2	NA	NA	4682	0	any annotated donor/acceptor	FALSE	canonical	1	210	junction_5	73301.48220766071	NA	6	NA	TRUE	NA	NA	NA	C	coding	159	480	137	616	45.0	-21	False	AATAAA	-18
PB.2053.19	chr11	+	3559	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	6653	12531	3900	6496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	137	414	709	1122	85.0	-9716	False	NA	NA
PB.2053.18	chr11	+	4996	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	5216	12531	2463	6496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	137	414	2146	2559	85.0	-9746	False	NA	NA
PB.4144.2	chr16	-	1758	10	novel_not_in_catalog	LMF1	novel	2621	11	NA	NA	-5	16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	48086.154163614636	NA	1	1	TRUE	NA	NA	NA	B	coding	350	1053	658	1710	10.0	-6	True	AATAAA	-31
PB.4144.3	chr16	-	2602	1	full-splice_match	AC009041.4	ENST00000620075.1	638	1	-1971	7	-1971	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	212	639	25	663	35.0	-2	True	ATTAAA	-10
PB.2053.17	chr11	+	2107	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	3930	16706	1177	2321	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-10007	False	TTTAAA	-27
PB.4144.1	chr16	-	2604	10	novel_not_in_catalog	LMF1	novel	2621	11	NA	NA	-5	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	48086.154163614636	NA	1	1	TRUE	NA	NA	NA	B	coding	350	1053	658	1710	50.0	-6	True	NA	NA
PB.2053.11	chr11	+	3646	2	full-splice_match	NEAT1	ENST00000601801.3	3524	2	1	-123	1	15	multi-exon	FALSE	canonical	1	23656	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3	True	AATAAA	-21
PB.2053.10	chr11	+	6036	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	1	16706	1	2321	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	25	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	1	True	TTTAAA	-27
PB.2053.12	chr11	+	2397	2	full-splice_match	NEAT1	ENST00000499732.3	3441	2	527	517	176	-445	multi-exon	FALSE	canonical	1	254151	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9528	False	AATGAA	-22
PB.5928.31	chr19	+	2957	13	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7848	junction_2	214675.99362416106	NA	1	1	TRUE	NA	NA	NA	C	coding	639	1920	380	2299	40.0	0	True	AATAAA	-21
PB.5928.30	chr19	+	3220	13	novel_in_catalog	CD22	novel	554	4	NA	NA	0	8	no_combination_of_known_junctions	FALSE	canonical	1	12961	junction_1	173565.6787714948	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	371	2554	20.0	0	True	AATAAA	-29
PB.5928.33	chr19	+	2528	11	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2138	junction_1	179360.89804862707	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	113	1870	40.0	0	True	AATAAA	-21
PB.5928.32	chr19	+	2829	12	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4243	junction_1	223740.4230878658	NA	1	1	TRUE	NA	NA	NA	C	coding	722	2169	3	2171	40.0	0	True	AATAAA	-21
PB.5928.35	chr19	+	3378	14	novel_in_catalog	CD22	novel	554	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	464	junction_1	188985.93204150844	NA	3	NA	TRUE	NA	NA	NA	C	coding	847	2544	177	2720	40.0	3	True	AATAAA	-21
PB.5928.34	chr19	+	1997	2	novel_not_in_catalog	CD22	novel	554	4	NA	NA	0	-383	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	282	849	3	851	80.0	0	True	NA	NA
PB.2751.18	chr12	+	4668	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	-69	-2076	-69	-1298	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	174	1634	15.0	0	True	AATGAA	-18
PB.2751.19	chr12	+	5438	12	novel_in_catalog	MDM2	novel	12633	11	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	9102	junction_11	183023.62502214828	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	110	1570	35.0	-7827	False	AATAAA	-26
PB.2751.16	chr12	+	3308	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_11	214103.3451268822	NA	4	NA	TRUE	NA	NA	NA	C	coding	486	1461	321	1781	35.0	12	True	AATAAA	-26
PB.2751.17	chr12	+	5556	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	10	4	intron_retention	FALSE	canonical	1	654	junction_11	179092.0793665502	NA	5	2	TRUE	NA	NA	NA	C	coding	486	1461	311	1771	40.0	22	True	AATAAA	-18
PB.2751.14	chr12	+	2396	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	5	22808	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	179246.5998824566	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	331	1791	60.0	2	True	NA	NA
PB.2751.15	chr12	+	3545	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	6	4	intron_retention	FALSE	canonical	1	654	junction_12	213065.13838573717	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	330	1838	40.0	3	True	AATAAA	-18
PB.2751.12	chr12	+	3579	13	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	3	2	intron_retention	FALSE	non_canonical	0	0	junction_12	213174.46702896513	NA	2	NA	TRUE	NA	NA	NA	C	coding	502	1509	333	1841	30.0	0	True	AATAAA	-30
PB.2751.13	chr12	+	6132	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	3	6498	3	-2	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	6	NA	TRUE	NA	NA	NA	C	coding	486	1461	333	1793	35.0	0	True	AATAAA	-21
PB.2751.10	chr12	+	5399	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	179246.5998824566	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	336	1796	35.0	-3	True	AATAAA	-26
PB.2751.11	chr12	+	4561	11	full-splice_match	MDM2	ENST00000258149.9	12633	11	2	8070	2	-1565	multi-exon	FALSE	canonical	1	315797	junction_1	107051.17823494518	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	334	1794	35.0	-1	True	AATACA	-19
PB.12017.3	chrX	-	4617	16	full-splice_match	DMD	ENST00000361471.8	2224	16	-65	-2328	-20	0	multi-exon	FALSE	canonical	1	46360	junction_7	35495.56380331992	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	144	2012	45.0	-21	True	AATAAA	-18
PB.11356.3	chr8	-	2974	19	full-splice_match	AGO2	ENST00000220592.9	14581	19	-11	11618	-11	320	multi-exon	FALSE	canonical	1	45207	junction_18	73689.40753897025	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	125	2704	50.0	2	True	ATTAAA	-20
PB.2136.2	chr11	+	3548	1	genic	AP002387.1	novel	NA	NA	NA	NA	-67	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-21	True	NA	NA
PB.2136.1	chr11	+	2261	1	genic	AP002387.1	novel	NA	NA	NA	NA	-96	-1319	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	1	True	NA	NA
PB.12017.1	chrX	-	4670	18	full-splice_match	DMD	ENST00000378702.8	2617	18	-97	-1956	-2	0	multi-exon	FALSE	canonical	1	56445	junction_17	37557.12474982675	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	126	1979	45.0	-3	True	AATAAA	-18
PB.247.7	chr1	+	1517	3	incomplete-splice_match	KHDRBS1	ENST00000307714.12	2738	9	24584	3	24328	-3	5prime_fragment	FALSE	canonical	1	1510829	junction_2	198358.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	5228	False	AATAAA	-20
PB.247.6	chr1	+	4912	10	novel_in_catalog	KHDRBS1	novel	2757	9	NA	NA	41	0	intron_retention	FALSE	canonical	1	64727	junction_9	570922.3982096271	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	415	1458	20.0	0	True	AATAAA	-16
PB.2613.2	chr12	-	2848	3	incomplete-splice_match	POU6F1	ENST00000546685.5	364	4	-234	3236	-193	2445	3prime_fragment	FALSE	canonical	1	16347	junction_2	20967.5	NA	3	NA	TRUE	NA	NA	NA	B	coding	107	324	308	631	95.0	-20	True	NA	NA
PB.2613.1	chr12	-	3327	11	novel_not_in_catalog	POU6F1	novel	5157	11	NA	NA	-315	18	any annotated donor/acceptor	FALSE	canonical	1	16086	junction_7	24434.973866161596	NA	2	NA	TRUE	NA	NA	NA	B	coding	610	1833	430	2262	20.0	88	False	AATAAA	-15
PB.7063.10	chr2	+	2949	22	novel_not_in_catalog	PSMD1	novel	3230	24	NA	NA	199	0	any annotated donor/acceptor	FALSE	canonical	1	1943	junction_1	271442.34827329806	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2109	841	2949	80.0	218	False	NA	NA
PB.10502.1	chr7	+	2833	7	novel_not_in_catalog	SUGCT	novel	1369	13	NA	NA	4	24669	any annotated donor/acceptor	FALSE	canonical	1	1781	junction_6	11723.11325260203	NA	1	NA	TRUE	NA	NA	NA	A	coding	202	609	17	625	70.0	0	True	NA	NA
PB.8483.2	chr3	+	3982	16	full-splice_match	GMPS	ENST00000496455.6	8751	16	96	4673	-18	1643	multi-exon	FALSE	canonical	1	45409	junction_14	310376.0047514126	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	240	2321	55.0	-30	True	TATAAA	-42
PB.5351.4	chr17	-	2384	9	novel_in_catalog	WDR45B	novel	2587	10	NA	NA	0	4	intron_retention	FALSE	canonical	1	15433	junction_7	118974.89066336383	NA	2	NA	TRUE	NA	NA	NA	C	coding	310	933	105	1037	30.0	-1	True	AATAAA	-24
PB.247.4	chr1	+	2311	11	full-splice_match	KHDRBS1	ENST00000484270.2	1989	11	-321	-1	32	1	multi-exon	FALSE	canonical	1	48484	junction_9	706828.8815402495	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	136	1467	20.0	-9	True	AATAAA	-17
PB.5351.7	chr17	-	2682	11	novel_not_in_catalog	WDR45B	novel	2587	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	510	junction_8	130274.71614937413	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	552	1340	25.0	-1	True	AATAAA	-19
PB.8168.1	chr3	+	5142	21	full-splice_match	NISCH	ENST00000345716.8	5238	21	96	0	-13	0	multi-exon	FALSE	canonical	1	229789	junction_13	139178.63522735809	NA	2	NA	TRUE	NA	NA	NA	C	coding	1504	4515	39	4553	35.0	-26	True	AATAAA	-22
PB.247.3	chr1	+	2234	9	full-splice_match	KHDRBS1	ENST00000327300.11	2757	9	515	8	162	-3	multi-exon	FALSE	canonical	1	1330178	junction_1	226516.00656131207	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	16	984	45.0	150	False	AATAAA	-20
PB.5351.6	chr17	-	2763	11	novel_not_in_catalog	WDR45B	novel	2587	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	419	junction_8	132671.13409841646	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	438	1421	25.0	-1	True	AATAAA	-19
PB.9856.3	chr6	-	2021	12	novel_in_catalog	FLOT1	novel	1583	7	NA	NA	-7	-122	intron_retention	FALSE	canonical	1	679585	junction_11	645235.80301714	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	690	1736	25.0	0	True	ATTAAA	-13
PB.8483.5	chr3	+	4607	16	full-splice_match	GMPS	ENST00000496455.6	8751	16	91	4053	-23	2263	multi-exon	FALSE	canonical	1	45409	junction_14	310376.0047514126	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	245	2326	15.0	-35	True	ATTAAA	-17
PB.9074.20	chr4	+	3115	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	-3	-701	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	133	621	45.0	11	True	CATAAA	-10
PB.5591.7	chr19	+	4190	6	novel_in_catalog	AC005258.1	novel	1268	8	NA	NA	59166	1316	intron_retention	FALSE	canonical	1	34015	junction_5	107204.80521618422	NA	5	1	TRUE	NA	NA	NA	B	coding	117	354	2367	2720	65.0	7	True	NA	NA
PB.8168.3	chr3	+	2598	14	full-splice_match	NISCH	ENST00000420808.2	2589	14	-13	4	-13	0	multi-exon	TRUE	canonical	1	110490	junction_13	145430.2104799298	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	39	1586	5.0	-26	True	AATAAA	-16
PB.9074.25	chr4	+	2430	2	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	2130	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2104	False	NA	NA
PB.10694.1	chr7	+	12644	71	novel_in_catalog	TRRAP	novel	550	5	NA	NA	-6	-2	combination_of_known_junctions	TRUE	canonical	1	54232	junction_1	74110.11458925599	NA	0	NA	TRUE	NA	NA	NA	B	coding	3848	11547	216	11762	10.0	-22	True	AATAAA	-12
PB.8168.4	chr3	+	4116	12	incomplete-splice_match	NISCH	ENST00000345716.8	5238	21	22583	7	-130	-4	5prime_fragment	FALSE	canonical	1	229789	junction_4	152834.7627140755	NA	1	NA	TRUE	NA	NA	NA	C	coding	1113	3342	193	3534	25.0	-6268	False	AATAAA	-15
PB.8483.7	chr3	+	1237	8	incomplete-splice_match	GMPS	ENST00000496455.6	8751	16	98	29494	-16	3722	3prime_fragment	FALSE	canonical	1	481498	junction_1	189172.55824850948	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	999	238	1236	65.0	-28	True	NA	NA
PB.10694.2	chr7	+	4440	19	incomplete-splice_match	TRRAP	ENST00000355540.7	12590	71	98041	9	571	-5	5prime_fragment	FALSE	canonical	1	48845	junction_11	91324.27024627918	NA	0	NA	TRUE	NA	NA	NA	B	coding	1170	3513	49	3561	25.0	NA	False	AATAAA	-9
PB.6388.1	chr2	+	5501	4	full-splice_match	FOSL2	ENST00000264716.8	6708	4	590	617	590	-617	multi-exon	FALSE	canonical	1	452729	junction_1	100372.25935818454	NA	1	NA	TRUE	NA	NA	NA	A	coding	326	981	274	1254	15.0	1	True	ATTAAA	-20
PB.8483.8	chr3	+	4237	16	full-splice_match	GMPS	ENST00000496455.6	8751	16	102	4412	-12	1904	multi-exon	FALSE	canonical	1	45409	junction_14	310376.0047514126	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	234	2315	10.0	-24	True	NA	NA
PB.5591.4	chr19	+	2536	15	full-splice_match	SPPL2B	ENST00000613503.4	3456	15	43	877	0	-4	multi-exon	FALSE	canonical	1	34015	junction_7	143830.63023073852	NA	3	NA	TRUE	NA	NA	NA	C	coding	592	1779	38	1816	20.0	-11	True	AATAAA	-15
PB.8168.6	chr3	+	3753	5	novel_in_catalog	NISCH	novel	5173	22	NA	NA	1450	-2	intron_retention	FALSE	canonical	1	532719	junction_1	80373.5910187544	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	227	1813	30.0	-8751	False	AATAAA	-17
PB.6503.9	chr2	-	3570	8	novel_not_in_catalog	PELI1	novel	3750	7	NA	NA	0	-215	any annotated donor/acceptor	FALSE	canonical	1	1417	junction_5	151649.21746771867	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	410	1735	50.0	-1	True	AGTAAA	-9
PB.6503.8	chr2	-	3710	8	novel_in_catalog	PELI1	novel	3750	7	NA	NA	0	-215	combination_of_known_junctions	FALSE	canonical	1	2286	junction_7	154788.4022370605	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	619	1875	50.0	-1	True	AGTAAA	-9
PB.1488.1	chr10	-	1829	1	antisense	novelGene_LRMDA_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	128	387	28	414	100.0	NA	False	NA	NA
PB.6503.5	chr2	-	4979	7	novel_in_catalog	PELI1	novel	3750	7	NA	NA	0	-206	combination_of_known_junctions	FALSE	canonical	1	6541	junction_5	133362.36586542032	NA	2	NA	TRUE	NA	NA	NA	C	coding	320	963	2173	3135	25.0	-1	True	AGTAAA	-18
PB.6503.4	chr2	-	3238	5	novel_in_catalog	PELI1	novel	3750	7	NA	NA	2	-206	no_combination_of_known_junctions	FALSE	canonical	1	792	junction_4	161568.92064147114	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	432	1394	25.0	1	True	AGTAAA	-18
PB.6503.3	chr2	-	3289	5	novel_in_catalog	PELI1	novel	3750	7	NA	NA	-10	-205	no_combination_of_known_junctions	FALSE	canonical	1	2434	junction_3	153949.83715564627	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	725	1444	20.0	-11	False	AGTAAA	-19
PB.6503.2	chr2	-	3395	7	full-splice_match	PELI1	ENST00000358912.4	3750	7	140	215	48	-215	multi-exon	FALSE	canonical	1	202963	junction_6	70162.56523583087	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	304	1560	50.0	105	False	AGTAAA	-9
PB.6503.1	chr2	-	3710	7	full-splice_match	PELI1	ENST00000358912.4	3750	7	34	6	0	-6	multi-exon	FALSE	canonical	1	202963	junction_6	70162.56523583087	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	410	1666	25.0	-1	True	AATAAA	-19
PB.1414.3	chr10	-	2053	8	full-splice_match	ZWINT	ENST00000395405.5	1851	8	0	-202	0	-8	multi-exon	FALSE	canonical	1	731231	junction_6	140278.1919541251	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	38	871	40.0	-15	True	NA	NA
PB.2108.1	chr11	-	1871	11	full-splice_match	CORO1B	ENST00000341356.9	1881	11	38	-28	-2	0	multi-exon	FALSE	canonical	1	734687	junction_1	195902.1401825156	NA	0	NA	TRUE	NA	NA	NA	A	coding	489	1470	74	1543	20.0	1	True	AATAAA	-19
PB.1414.1	chr10	-	5626	8	full-splice_match	ZWINT	ENST00000395405.5	1851	8	19	-3794	5	3584	multi-exon	TRUE	canonical	1	731231	junction_6	140278.1919541251	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	19	852	20.0	4	True	ATTAAA	-19
PB.7749.1	chr22	+	3610	3	novel_not_in_catalog	MPST	novel	1345	3	NA	NA	-4	0	intron_retention	FALSE	canonical	1	10	junction_2	112867.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	74	1018	20.0	22	True	AATAAA	-14
PB.1414.7	chr10	-	2344	6	novel_in_catalog	ZWINT	novel	1872	9	NA	NA	1	-23	intron_retention	FALSE	canonical	1	733061	junction_2	131996.7107202297	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	704	1177	25.0	-6	True	NA	NA
PB.1414.6	chr10	-	1687	9	full-splice_match	ZWINT	ENST00000361148.6	807	9	13	-893	6	-22	multi-exon	FALSE	canonical	1	110120	junction_3	291979.7591646712	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	18	710	25.0	5	True	NA	NA
PB.1414.5	chr10	-	1789	9	novel_not_in_catalog	ZWINT	novel	1872	9	NA	NA	8	-22	any annotated donor/acceptor	FALSE	canonical	1	34427	junction_1	313869.8056283648	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	16	849	25.0	7	True	NA	NA
PB.1414.4	chr10	-	1849	9	full-splice_match	ZWINT	ENST00000373944.7	1872	9	2	21	0	-21	multi-exon	FALSE	canonical	1	731231	junction_7	131234.88042699432	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	38	871	30.0	-15	True	NA	NA
PB.1748.3	chr11	+	3235	3	novel_not_in_catalog	EPS8L2	novel	580	6	NA	NA	1368	-5460	intron_retention	FALSE	non_canonical	0	0	junction_2	7043.5	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-10	True	AATAAA	-18
PB.1748.2	chr11	+	1437	4	novel_not_in_catalog	EPS8L2	novel	580	6	NA	NA	1366	-5459	intron_retention	FALSE	canonical	0	0	junction_1	109900.07438375807	NA	3	NA	TRUE	NA	NA	NA	B	coding	104	315	148	462	25.0	-12	True	AATAAA	-19
PB.1748.1	chr11	+	3678	3	novel_not_in_catalog	EPS8L2	novel	580	6	NA	NA	1362	-5459	intron_retention	FALSE	canonical	0	0	junction_1	134558.5	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-16	True	AATAAA	-19
PB.1414.8	chr10	-	1975	7	full-splice_match	ZWINT	ENST00000494312.5	1961	7	-14	0	0	0	multi-exon	FALSE	canonical	1	733061	junction_3	121721.35547190011	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	713	1186	10.0	-15	True	NA	NA
PB.1509.4	chr10	+	3656	14	novel_in_catalog	BMPR1A	novel	5632	14	NA	NA	55	-4549	combination_of_known_junctions	FALSE	canonical	1	20	junction_9	14415.076175174885	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	588	2186	30.0	-65	False	AATAAA	-21
PB.1509.5	chr10	+	3522	13	full-splice_match	BMPR1A	ENST00000372037.7	11255	13	82	7651	82	-4551	multi-exon	FALSE	canonical	1	20	junction_8	14481.431738177685	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	456	2054	30.0	-38	False	AATAAA	-19
PB.1509.6	chr10	+	3484	12	novel_in_catalog	BMPR1A	novel	5632	14	NA	NA	1	-4555	no_combination_of_known_junctions	FALSE	canonical	1	20	junction_7	15698.745504967972	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	422	2020	25.0	3	True	AATAAA	-15
PB.1509.7	chr10	+	3198	14	novel_in_catalog	BMPR1A	novel	5632	14	NA	NA	31	-5031	combination_of_known_junctions	FALSE	canonical	1	20	junction_9	14415.076175174885	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	612	2210	20.0	-89	False	TTTAAA	-16
PB.11712.26	chr9	+	4372	3	full-splice_match	AKAP2	ENST00000485762.1	363	3	93	-4102	93	-4	multi-exon	FALSE	canonical	1	41092	junction_1	158867.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-4	True	ATTAAA	-24
PB.8479.5	chr3	-	3504	25	full-splice_match	DHX36	ENST00000496811.5	6733	25	-2	3231	-2	-109	multi-exon	FALSE	canonical	1	245994	junction_22	85798.50177009536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	84	3110	50.0	-38	True	AGTAAA	-33
PB.12388.1	chrY	+	2840	7	novel_not_in_catalog	OFD1P6Y	novel	2724	21	NA	NA	-24680	-20245	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	6.335525936249404	NA	5	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-25
PB.10896.4	chr7	+	4890	8	novel_not_in_catalog	AC073264.3	novel	1890	2	NA	NA	-3	84415	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	16116.672005430037	NA	0	NA	TRUE	NA	NA	NA	B	coding	638	1917	551	2467	25.0	5	True	NA	NA
PB.7709.1	chr22	-	2612	1	genic	AC004542.2_AC004542.1	novel	NA	NA	NA	NA	306	584	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-9508	False	NA	NA
PB.2520.10	chr12	+	3489	16	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-32	-924	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	71742.0647176784	NA	1	1	TRUE	NA	NA	NA	C	coding	588	1767	186	1952	30.0	-74	False	AATAAA	-13
PB.2520.11	chr12	+	2346	15	full-splice_match	ARNTL2	ENST00000395901.6	1954	15	-32	-360	-32	-1	multi-exon	FALSE	canonical	1	15968	junction_1	64187.28167591986	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	186	1985	30.0	-74	False	AATATA	-16
PB.2520.12	chr12	+	4335	16	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-24	7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	71742.0647176784	NA	1	1	TRUE	NA	NA	NA	C	coding	588	1767	178	1944	35.0	-14	True	AATAAA	-24
PB.7676.2	chr22	+	2800	2	full-splice_match	TTC28-AS1	ENST00000436996.1	662	2	0	-2138	0	-255	multi-exon	FALSE	canonical	1	116271	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-62	True	NA	NA
PB.144.6	chr1	-	1547	11	full-splice_match	DDOST	ENST00000602624.6	1963	11	4	412	1	-412	multi-exon	FALSE	canonical	1	2573028	junction_4	657504.5291691609	NA	3	NA	TRUE	NA	NA	NA	C	coding	439	1320	38	1357	35.0	136	False	TATAAA	-18
PB.4645.5	chr17	-	1644	5	novel_in_catalog	YWHAE	novel	2211	6	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	13850	junction_1	938562.6085910571	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	111	692	25.0	-22	True	NA	NA
PB.1172.1	chr1	-	2947	12	incomplete-splice_match	CDC42BPA	ENST00000366769.7	10855	36	-34	129965	-34	-7846	3prime_fragment	FALSE	canonical	1	160799	junction_10	40157.924322202816	NA	2	NA	TRUE	NA	NA	NA	B	coding	540	1620	1327	2946	60.0	-17	True	AAAACA	-15
PB.4645.1	chr17	-	2050	6	full-splice_match	YWHAE	ENST00000264335.12	2211	6	157	4	-1	-4	multi-exon	FALSE	canonical	1	1616781	junction_5	499682.16953315435	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	112	879	35.0	-23	True	ATTAAA	-17
PB.4645.2	chr17	-	1733	6	full-splice_match	YWHAE	ENST00000264335.12	2211	6	179	299	1	-31	multi-exon	FALSE	canonical	1	1616781	junction_5	499682.16953315435	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	90	857	65.0	-1	True	NA	NA
PB.4645.3	chr17	-	1814	7	full-splice_match	YWHAE	ENST00000571732.5	1818	7	2	2	2	-2	multi-exon	FALSE	canonical	1	149416	junction_5	1108469.4758032607	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	208	909	25.0	-20	True	NA	NA
PB.8924.12	chr4	-	3229	11	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	169	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	105920.80152968066	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	946	2106	35.0	4505	False	AATAAA	-19
PB.8924.10	chr4	-	3373	10	novel_in_catalog	LEF1	novel	3068	12	NA	NA	33	-4	no_combination_of_known_junctions	FALSE	canonical	1	1205	junction_3	97969.9954038587	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	1157	2164	35.0	8	True	AATAAA	-19
PB.8924.11	chr4	-	3342	12	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	140	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	99121.0456267929	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	975	2219	35.0	-1	True	AATAAA	-19
PB.8924.15	chr4	-	2414	10	novel_in_catalog	LEF1	novel	3068	12	NA	NA	107	-4	combination_of_known_junctions	FALSE	canonical	1	47559	junction_9	101654.93300971614	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	335	1291	35.0	-1	True	AATAAA	-19
PB.144.3	chr1	-	2060	11	full-splice_match	DDOST	ENST00000375048.7	2079	11	16	3	16	-3	multi-exon	FALSE	canonical	1	2573028	junction_4	657504.5291691609	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	142	1461	20.0	6	True	AATAAA	-17
PB.144.2	chr1	-	1819	12	novel_not_in_catalog	PINK1-AS	novel	4443	3	NA	NA	-9206	-6703	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1210269.8450247631	NA	3	1	TRUE	NA	NA	NA	B	coding	439	1320	50	1369	25.0	3	True	ATTAAA	-22
PB.4490.4	chr16	+	3963	23	novel_not_in_catalog	RIPOR1	novel	244	2	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	130791.65953310463	NA	1	1	TRUE	NA	NA	NA	C	coding	1175	3528	115	3642	20.0	-8	True	AATAAA	-19
PB.4490.5	chr16	+	2164	14	novel_not_in_catalog	RIPOR1	novel	244	2	NA	NA	18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	154861.0221314888	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2058	107	2164	20.0	0	True	AATAAA	-20
PB.4490.6	chr16	+	4158	22	full-splice_match	RIPOR1	ENST00000428437.6	4152	22	-9	3	-9	-1	multi-exon	FALSE	canonical	1	27371	junction_1	116891.78545356188	NA	1	NA	TRUE	NA	NA	NA	C	coding	1233	3702	135	3836	20.0	-8733	False	AATAAA	-20
PB.4490.7	chr16	+	4011	23	novel_not_in_catalog	RIPOR1	novel	244	2	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	139464.12989489033	NA	2	NA	TRUE	NA	NA	NA	C	coding	1190	3573	117	3689	20.0	-10	True	AATAAA	-20
PB.4490.1	chr16	+	2217	14	novel_not_in_catalog	RIPOR1	novel	244	2	NA	NA	-20	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	154861.0221314888	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2073	145	2217	20.0	-8676	False	AATAAA	-20
PB.4490.2	chr16	+	4054	22	novel_not_in_catalog	RIPOR1	novel	244	2	NA	NA	-10	0	intron_retention	FALSE	canonical	1	7558	junction_10	131354.12520332955	NA	1	NA	TRUE	NA	NA	NA	C	coding	1198	3597	135	3731	15.0	-28	True	AATAAA	-21
PB.4490.3	chr16	+	4104	22	full-splice_match	RIPOR1	ENST00000042381.8	4051	22	-54	1	-1	-1	multi-exon	FALSE	canonical	1	113832	junction_1	105184.06739641904	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	126	3782	20.0	-19	True	AATAAA	-20
PB.3553.3	chr14	-	3501	16	full-splice_match	ENTPD5	ENST00000334696.10	5842	16	45	2296	10	-2296	multi-exon	FALSE	canonical	1	27657	junction_15	71955.32308852024	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	276	1562	50.0	0	True	NA	NA
PB.3553.2	chr14	-	5278	16	full-splice_match	ENTPD5	ENST00000334696.10	5842	16	24	540	2	-540	multi-exon	TRUE	canonical	1	27657	junction_15	71955.32308852024	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	297	1583	25.0	-21	True	AATAAA	-16
PB.11507.14	chr9	-	3969	28	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12291	junction_27	84405.0280854745	NA	0	NA	TRUE	NA	NA	NA	C	coding	1081	3246	79	3324	75.0	-1	True	NA	NA
PB.11507.15	chr9	-	3950	27	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24058	junction_21	85895.14477007701	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	108	3305	75.0	-1	True	NA	NA
PB.11507.12	chr9	-	4113	29	full-splice_match	UBAP2	ENST00000379238.5	4289	29	10	166	-4	0	multi-exon	FALSE	canonical	1	179657	junction_28	65871.9369493116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	112	3468	75.0	-5	True	NA	NA
PB.11507.13	chr9	-	4041	28	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	40083	junction_18	83111.19187005055	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	1036	3396	75.0	-1	True	NA	NA
PB.11507.10	chr9	-	4310	30	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	15730	junction_27	100395.76275854079	NA	0	NA	TRUE	NA	NA	NA	C	coding	1081	3246	257	3502	10.0	-1	True	AATAAA	-12
PB.3553.4	chr14	-	2009	16	full-splice_match	ENTPD5	ENST00000334696.10	5842	16	36	3797	1	-3797	multi-exon	FALSE	canonical	1	27657	junction_15	71955.32308852024	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	285	1571	85.0	-9	True	NA	NA
PB.9048.1	chr4	-	5958	8	full-splice_match	NAF1	ENST00000274054.2	1907	8	41	-4092	10	2131	multi-exon	FALSE	canonical	1	122657	junction_4	24378.661869155414	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	154	1638	25.0	5	True	NA	NA
PB.4659.1	chr17	+	2481	8	full-splice_match	SRR	ENST00000344595.9	2728	8	249	-2	-1	2	multi-exon	FALSE	canonical	1	90669	junction_1	24232.896354218283	NA	0	NA	TRUE	NA	NA	NA	A	coding	340	1023	70	1092	20.0	-3	True	AATAAA	-26
PB.9048.3	chr4	-	1884	8	novel_not_in_catalog	NAF1	novel	385	3	NA	NA	10	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	81313.15957080844	NA	4	1	TRUE	NA	NA	NA	C	coding	222	669	993	1661	35.0	5	True	ATTAAA	-17
PB.9048.4	chr4	-	1223	3	novel_in_catalog	NAF1	novel	1604	8	NA	NA	3	1	no_combination_of_known_junctions	FALSE	canonical	1	11338	junction_1	57091.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	192	770	25.0	-33	True	AATAAA	-10
PB.1462.4	chr10	-	2034	10	novel_in_catalog	MICU1	novel	2488	12	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	1056	junction_9	163011.33112156557	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	82	1179	10.0	-9	True	AATAAA	-14
PB.1462.5	chr10	-	2368	12	full-splice_match	MICU1	ENST00000361114.9	2383	12	11	4	11	-4	multi-exon	FALSE	canonical	1	349282	junction_6	99791.83721623596	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	87	1517	10.0	-16	True	AATAAA	-10
PB.3272.1	chr13	-	1349	8	full-splice_match	GRTP1	ENST00000375431.8	1384	8	19	16	19	-16	multi-exon	FALSE	canonical	1	64644	junction_6	19472.285223792678	NA	0	NA	TRUE	NA	NA	NA	A	coding	336	1011	57	1067	20.0	22	True	AATAAA	-9
PB.1462.1	chr10	-	2498	13	novel_not_in_catalog	MICU1	novel	2488	12	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	13	junction_3	207503.334119984	NA	1	1	TRUE	NA	NA	NA	C	coding	411	1236	101	1336	10.0	16	False	AATAAA	-14
PB.1462.2	chr10	-	2473	13	novel_not_in_catalog	MICU1	novel	2488	12	NA	NA	13	0	any annotated donor/acceptor	FALSE	canonical	1	1879	junction_11	202206.2257797133	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	188	1618	10.0	17	True	AATAAA	-14
PB.1462.3	chr10	-	2337	12	novel_in_catalog	MICU1	novel	2488	12	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	2337	junction_11	169284.73219875238	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	151	1482	10.0	-16	True	AATAAA	-14
PB.10974.1	chr8	+	2176	1	full-splice_match	CLDN23	ENST00000519106.1	2169	1	-26	19	-26	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	292	879	488	1366	50.0	-25	True	AATAAA	-6
PB.6716.6	chr2	-	1924	1	full-splice_match	TMEM185B	ENST00000426077.2	2131	1	6	201	6	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	350	1053	427	1479	15.0	-3	True	TATAAA	-14
PB.6435.2	chr2	-	1912	3	full-splice_match	COX7A2L	ENST00000234301.2	1112	3	-12	-788	-12	-381	multi-exon	FALSE	canonical	1	1920980	junction_2	59598.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	114	345	68	412	50.0	-12	False	NA	NA
PB.6716.4	chr2	-	1931	1	full-splice_match	TMEM185B	ENST00000426077.2	2131	1	1137	-937	1137	937	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	93	282	67	348	50.0	1128	False	AATAAA	-20
PB.6716.3	chr2	-	2797	1	full-splice_match	TMEM185B	ENST00000426077.2	2131	1	271	-937	271	937	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	350	1053	162	1214	50.0	3	True	AATAAA	-20
PB.6716.2	chr2	-	2889	1	intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	170	513	2048	2560	30.0	3031	False	NA	NA
PB.6716.1	chr2	-	5921	1	full-splice_match	TMEM185B	ENST00000426077.2	2131	1	8	-3798	8	3798	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	350	1053	425	1477	30.0	-1	True	NA	NA
PB.1155.19	chr1	-	3890	15	novel_not_in_catalog	LBR	novel	3745	14	NA	NA	-67	-4	any annotated donor/acceptor	FALSE	canonical	1	1860	junction_3	277622.9088370921	NA	16	2	TRUE	NA	NA	NA	C	coding	510	1533	164	1696	15.0	718	False	AATAAA	-16
PB.1155.18	chr1	-	3175	9	novel_in_catalog	LBR	novel	3745	14	NA	NA	-80	-3	no_combination_of_known_junctions	FALSE	canonical	1	169	junction_3	262643.18657817395	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	177	1028	15.0	-1	True	AATAAA	-17
PB.1155.12	chr1	-	5732	13	novel_in_catalog	LBR	novel	3745	14	NA	NA	-31	0	intron_retention	FALSE	canonical	1	411936	junction_12	133241.3549003743	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	128	1621	10.0	-29	True	AATAAA	-20
PB.1155.11	chr1	-	5705	12	novel_in_catalog	LBR	novel	3745	14	NA	NA	-28	0	intron_retention	FALSE	canonical	1	411936	junction_11	121309.0732486498	NA	3	NA	TRUE	NA	NA	NA	C	coding	364	1095	125	1219	10.0	-26	True	AATAAA	-20
PB.11467.1	chr9	+	3052	3	antisense	novelGene_C9orf92_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	32	junction_1	6.5	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-14
PB.8585.2	chr3	-	2668	8	novel_in_catalog	CRYGS	novel	1132	4	NA	NA	-20659	-7474	no_combination_of_known_junctions	FALSE	canonical	1	2217	junction_6	34657.015916620665	NA	3	NA	TRUE	NA	NA	NA	A	coding	541	1626	139	1764	35.0	2956	False	AATAAA	-9
PB.11381.3	chr8	+	6647	2	full-splice_match	ZNF623	ENST00000526926.5	2612	2	7	-4042	7	0	multi-exon	FALSE	canonical	1	36897	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	496	1491	222	1712	15.0	-10	True	NA	NA
PB.240.27	chr1	-	3788	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	6	-13	combination_of_known_junctions	FALSE	canonical	1	34118	junction_8	156991.40438861612	NA	1	1	TRUE	NA	NA	NA	C	coding	1107	3324	117	3440	70.0	-4	True	NA	NA
PB.6822.5	chr2	+	6347	14	full-splice_match	PPIG	ENST00000260970.7	6368	14	15	6	2	-6	multi-exon	FALSE	canonical	1	215149	junction_1	96492.30853972478	NA	4	NA	TRUE	NA	NA	NA	C	coding	754	2265	206	2470	30.0	4	True	AATAAA	-10
PB.1830.4	chr11	-	2167	6	full-splice_match	RRAS2	ENST00000526063.5	970	6	-19	-1178	-19	1	multi-exon	FALSE	canonical	1	8886	junction_5	55851.55007911598	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	372	755	30.0	-38	True	ATTAAA	-16
PB.9033.30	chr4	+	4895	33	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	23414	-3	any annotated donor/acceptor	FALSE	canonical	1	11847	junction_1	115957.25500076526	NA	1	NA	TRUE	NA	NA	NA	C	coding	1461	4386	378	4763	15.0	-112	False	AATAAA	-11
PB.9033.31	chr4	+	4742	33	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	-33093	-85	any annotated donor/acceptor	FALSE	canonical	1	354	junction_1	116741.11375399183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1461	4386	307	4692	30.0	-43	False	AATAAA	-19
PB.6822.1	chr2	+	1609	14	full-splice_match	PPIG	ENST00000260970.7	6368	14	35	4724	-12	-59	multi-exon	FALSE	canonical	1	215149	junction_1	96492.30853972478	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1422	186	1607	65.0	24	True	AGTAAA	-12
PB.11119.7	chr8	+	1558	9	full-splice_match	FNTA	ENST00000302279.7	1840	9	273	9	11	-1	multi-exon	FALSE	canonical	1	143788	junction_5	126165.85759124524	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	36	1061	55.0	-7	True	AATAAA	-15
PB.1830.3	chr11	-	2097	6	novel_not_in_catalog	RRAS2	novel	2034	6	NA	NA	11723	2	any annotated donor/acceptor	TRUE	canonical	1	2115	junction_5	57355.102237202926	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	301	684	30.0	6228	False	ATTAAA	-17
PB.1830.2	chr11	-	2157	7	novel_not_in_catalog	RRAS2	novel	2034	6	NA	NA	3	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	141950.24837479737	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	130	744	30.0	1	True	ATTAAA	-17
PB.3098.20	chr13	-	3605	2	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-7	2887	intron_retention	FALSE	canonical	1	306924	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	118	1380	100.0	-8	True	NA	NA
PB.3098.21	chr13	-	3055	2	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	212	2887	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	264	795	36	830	100.0	2009	False	NA	NA
PB.3098.22	chr13	-	5284	1	novel_in_catalog	N4BP2L2	novel	2917	10	NA	NA	2	2887	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	420	1263	1797	3059	100.0	1	True	NA	NA
PB.6822.9	chr2	+	6313	14	novel_in_catalog	PPIG	novel	6368	14	NA	NA	154	-3	combination_of_known_junctions	FALSE	canonical	1	90749	junction_1	119906.44488302206	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	169	2433	25.0	1	True	AATAAA	-13
PB.6617.6	chr2	-	935	4	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-166154	-45981	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	2646277.6857961994	NA	0	NA	TRUE	NA	NA	NA	B	coding	235	708	34	741	5.0	NA	False	AATAAA	-17
PB.6617.5	chr2	-	4937	2	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-166143	-45976	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	7	1	FALSE	NA	NA	NA	B	coding	142	429	3539	3967	5.0	NA	False	AATAAA	-22
PB.6617.4	chr2	-	5142	3	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-166154	-45976	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	724145.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	130	393	34	426	5.0	NA	False	AATAAA	-22
PB.2831.1	chr12	+	2355	10	novel_in_catalog	GAS2L3	novel	2218	9	NA	NA	-46	0	no_combination_of_known_junctions	TRUE	canonical	1	2012	junction_1	23143.387716314443	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	256	2340	75.0	-5022	False	AATAAA	-15
PB.3387.3	chr14	+	2110	7	full-splice_match	PSMA6	ENST00000261479.8	1029	7	38	-1119	0	1100	multi-exon	FALSE	canonical	1	336592	junction_5	394534.3536438099	NA	14	1	TRUE	NA	NA	NA	C	coding	246	741	83	823	30.0	3	True	NA	NA
PB.2831.3	chr12	+	5013	10	novel_in_catalog	GAS2L3	novel	2218	9	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	1	892	junction_9	25110.567385952163	NA	2	NA	TRUE	NA	NA	NA	C	coding	694	2085	159	2243	25.0	-26	True	ATTAAA	-12
PB.2831.2	chr12	+	5221	10	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-27	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	25318.877054165547	NA	2	NA	TRUE	NA	NA	NA	C	coding	694	2085	161	2245	25.0	-28	True	ATTAAA	-12
PB.2831.5	chr12	+	2340	11	novel_in_catalog	GAS2L3	novel	2218	9	NA	NA	11	-64	combination_of_known_junctions	FALSE	canonical	1	13105	junction_1	20125.858181950898	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2019	320	2338	60.0	10	True	GATAAA	-12
PB.2831.4	chr12	+	2576	12	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-20	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	24237.771874111855	NA	2	NA	TRUE	NA	NA	NA	C	coding	694	2085	477	2561	75.0	-21	True	AATAAA	-15
PB.2831.7	chr12	+	2651	9	full-splice_match	GAS2L3	ENST00000266754.9	2218	9	-11	-422	-11	393	multi-exon	FALSE	canonical	1	17845	junction_1	17896.714955194988	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	145	2229	75.0	-12	True	NA	NA
PB.2831.6	chr12	+	2157	9	full-splice_match	GAS2L3	ENST00000266754.9	2218	9	-3	64	-3	-64	multi-exon	FALSE	canonical	1	17845	junction_1	17896.714955194988	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2019	137	2155	60.0	-4	True	GATAAA	-12
PB.2831.9	chr12	+	2591	12	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	24237.771874111855	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	492	2576	75.0	-4	True	AATAAA	-15
PB.2831.8	chr12	+	2605	2	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-3	-14956	any annotated donor/acceptor	FALSE	canonical	1	17122	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	110	340	25.0	-4	True	AATAAA	-16
PB.11404.1	chr8	+	2978	13	novel_in_catalog	PPP1R16A	novel	4311	9	NA	NA	18	-3	intron_retention	TRUE	canonical	1	433	junction_2	127749.62487319895	NA	2	NA	TRUE	NA	NA	NA	B	coding	528	1587	1178	2764	5.0	-5	True	GATAAA	-15
PB.1645.22	chr10	+	2072	5	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	1715	-14	any annotated donor/acceptor	FALSE	canonical	1	20	junction_1	425892.28175971913	NA	3	1	TRUE	NA	NA	NA	C	coding	161	486	82	567	75.0	-6771	False	TTTAAA	-25
PB.1645.20	chr10	+	2242	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-1	-15	any annotated donor/acceptor	FALSE	canonical	1	19	junction_1	392206.9033115047	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	160	738	70.0	-8625	False	TTTAAA	-24
PB.10228.19	chr6	-	2811	3	novel_in_catalog	BCLAF1	novel	7719	15	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	1	405	junction_2	370478.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	57	True	AATAAA	-11
PB.9548.10	chr5	+	4749	15	incomplete-splice_match	FBXO38	ENST00000340253.9	4424	22	26	12935	9	2631	3prime_fragment	FALSE	canonical	1	145490	junction_4	30815.97356758938	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	143	2833	15.0	3	True	AATAAA	-14
PB.11000.13	chr8	-	1462	14	full-splice_match	ASAH1	ENST00000262097.11	2618	14	281	875	-1	-93	multi-exon	FALSE	canonical	1	671509	junction_9	286297.88506034005	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	32	1219	10.0	17	True	AGTAAA	-19
PB.9163.9	chr5	+	3092	9	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	3	38	combination_of_known_junctions	FALSE	canonical	1	18845	junction_2	80514.94833560023	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	584	1117	50.0	-9	True	AATAAA	-18
PB.7713.5	chr22	+	2559	16	novel_in_catalog	LIMK2	novel	1042	3	NA	NA	11	-222	combination_of_known_junctions	FALSE	canonical	1	29681	junction_15	118799.80738637585	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	160	2283	90.0	-48	True	AATAAA	-31
PB.7713.4	chr22	+	2293	15	incomplete-splice_match	LIMK2	ENST00000331728.8	3670	16	-46	4411	10	4	3prime_fragment	FALSE	canonical	1	78671	junction_1	101521.6635257003	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	161	2161	15.0	-49	True	AGTAAA	-22
PB.7713.7	chr22	+	3879	15	full-splice_match	LIMK2	ENST00000333611.8	3462	15	-73	-344	-29	-2	multi-exon	FALSE	canonical	1	114873	junction_1	89843.87383976558	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	389	2242	50.0	-29	True	AATAAA	-23
PB.7713.6	chr22	+	3715	16	full-splice_match	LIMK2	ENST00000331728.8	3670	16	-40	-5	16	5	multi-exon	FALSE	canonical	1	78671	junction_1	100368.05866666723	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	155	2071	40.0	-43	True	AATAAA	-30
PB.7713.1	chr22	+	3688	15	novel_in_catalog	LIMK2	novel	1042	3	NA	NA	-52	10	combination_of_known_junctions	FALSE	canonical	1	15007	junction_1	107038.20484506495	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	357	2039	35.0	-5359	False	AATAAA	-35
PB.10508.1	chr7	+	869	3	full-splice_match	MRPL32	ENST00000223324.2	1035	3	161	5	-15	-5	multi-exon	FALSE	canonical	1	406267	junction_1	317138.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	27	593	25.0	-16	True	NA	NA
PB.7713.3	chr22	+	2811	16	novel_in_catalog	LIMK2	novel	1042	3	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	1	29681	junction_15	118799.80738637585	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	192	2315	20.0	-5328	False	NA	NA
PB.7713.2	chr22	+	3410	16	full-splice_match	LIMK2	ENST00000331728.8	3670	16	-84	344	-28	2	multi-exon	FALSE	canonical	1	78671	junction_1	100368.05866666723	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	199	2115	15.0	-5335	False	AATAAA	-27
PB.10459.13	chr7	+	2788	2	incomplete-splice_match	TAX1BP1	ENST00000490455.1	591	3	-20	7167	2	-7167	3prime_fragment	FALSE	canonical	1	1075000	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-33	True	NA	NA
PB.10459.12	chr7	+	1813	13	incomplete-splice_match	TAX1BP1	ENST00000409980.5	2629	18	20	28857	-7	27485	3prime_fragment	FALSE	canonical	1	1075000	junction_1	192907.96198495151	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1698	116	1813	55.0	-20	True	AATAAA	-37
PB.10459.11	chr7	+	1563	11	incomplete-splice_match	TAX1BP1	ENST00000409980.5	2629	18	5	34536	0	21806	3prime_fragment	FALSE	canonical	1	1075000	junction_1	194957.12669982086	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1431	131	1561	50.0	-35	True	NA	NA
PB.10459.10	chr7	+	1730	12	incomplete-splice_match	TAX1BP1	ENST00000409980.5	2629	18	4	32701	-1	23641	3prime_fragment	FALSE	canonical	1	1075000	junction_1	197112.90527872974	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1599	132	1730	70.0	-36	True	AAGAAA	-9
PB.10459.17	chr7	+	2566	17	full-splice_match	TAX1BP1	ENST00000265393.10	2478	17	75	-163	1	22	multi-exon	FALSE	canonical	1	1075000	junction_1	227355.73423574562	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	108	2351	40.0	-12	True	AATAAA	-30
PB.7713.8	chr22	+	3537	15	full-splice_match	LIMK2	ENST00000333611.8	3462	15	-73	-2	-29	2	multi-exon	FALSE	canonical	1	114873	junction_1	89843.87383976558	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	389	2242	15.0	-29	True	AATAAA	-27
PB.10459.15	chr7	+	3209	16	incomplete-splice_match	TAX1BP1	ENST00000265393.10	2478	17	59	17	7	0	intron_retention	FALSE	canonical	1	1075000	junction_1	175660.44438657464	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	124	2169	90.0	-28	True	AATATA	-11
PB.10459.14	chr7	+	2579	15	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	6	-6	no_combination_of_known_junctions	FALSE	canonical	1	71980	junction_13	400155.9458878603	NA	23	1	TRUE	NA	NA	NA	C	coding	682	2049	103	2151	35.0	-7	True	AATAAA	-14
PB.12253.11	chrX	+	3391	7	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	-28	-1400	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	17698.722019933783	NA	4	NA	TRUE	NA	NA	NA	C	coding	123	372	373	744	75.0	17	True	NA	NA
PB.12253.10	chrX	+	2357	7	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	-34	-1399	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	26338.829407465237	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	166	1404	75.0	11	True	NA	NA
PB.12253.13	chrX	+	3373	7	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	166	-1399	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	19977.916619913653	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	375	725	75.0	62	False	NA	NA
PB.12253.12	chrX	+	4311	8	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	-1	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	25531.88364634721	NA	2	1	TRUE	NA	NA	NA	C	coding	497	1494	133	1626	30.0	44	True	AATAAA	-30
PB.11697.2	chr9	+	1723	5	incomplete-splice_match	NIPSNAP3A	ENST00000374767.4	1633	6	3	-3	3	3	intron_retention	FALSE	canonical	1	321598	junction_1	95561.55900517739	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	103	786	5.0	8	True	AATAAA	-19
PB.610.12	chr1	-	3296	9	novel_not_in_catalog	DRAM2	novel	2246	9	NA	NA	2	216	intron_retention	FALSE	canonical	1	110333	junction_8	282607.1399291559	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	2260	2766	30.0	-4	True	AATAAA	-15
PB.10874.4	chr7	-	5972	5	full-splice_match	ZC3HAV1L	ENST00000275766.1	1753	5	-12	-4207	-12	4207	multi-exon	FALSE	canonical	1	7007	junction_1	32073.479257596922	NA	5	NA	TRUE	NA	NA	NA	C	coding	300	903	25	927	20.0	-2	True	AATAAA	-16
PB.6142.1	chr19	+	2592	1	novel_in_catalog	SCAF1	novel	4306	11	NA	NA	85	-1757	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	-7	True	NA	NA
PB.3159.9	chr13	+	4741	28	novel_not_in_catalog	RB1	novel	4793	27	NA	NA	105	-8	any annotated donor/acceptor	FALSE	canonical	1	438	junction_3	124063.79736664337	NA	2	NA	TRUE	NA	NA	NA	C	coding	816	2451	480	2930	20.0	0	True	AATAAA	-13
PB.3159.8	chr13	+	1888	19	incomplete-splice_match	RB1	ENST00000650461.1	4629	27	116	25501	88	-80	3prime_fragment	FALSE	canonical	1	185716	junction_8	67385.55392684531	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1836	51	1886	60.0	-17	True	AATATA	-30
PB.3159.5	chr13	+	4715	27	novel_not_in_catalog	RB1	novel	4793	27	NA	NA	4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	105177.91405969328	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	448	2898	15.0	4	True	AATAAA	-19
PB.3159.4	chr13	+	3594	27	full-splice_match	RB1	ENST00000267163.5	4793	27	25	1174	0	69	multi-exon	FALSE	canonical	1	185716	junction_8	85673.18700118976	NA	1	1	TRUE	NA	NA	NA	C	coding	928	2787	163	2949	45.0	0	True	AATAAA	-16
PB.3159.7	chr13	+	3392	27	full-splice_match	RB1	ENST00000267163.5	4793	27	107	1294	58	-51	multi-exon	FALSE	canonical	1	185716	junction_8	85673.18700118976	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	81	2867	65.0	-47	True	NA	NA
PB.3159.6	chr13	+	4595	26	novel_not_in_catalog	RB1	novel	4793	27	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	canonical	1	691	junction_22	109535.74139157319	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	145	2778	15.0	2	True	AATAAA	-19
PB.3159.1	chr13	+	4606	27	full-splice_match	RB1	ENST00000267163.5	4793	27	185	2	136	-2	multi-exon	FALSE	canonical	1	185716	junction_8	85673.18700118976	NA	2	NA	TRUE	NA	NA	NA	C	coding	928	2787	3	2789	15.0	1	True	AATAAA	-19
PB.3159.3	chr13	+	4639	26	novel_in_catalog	RB1	novel	4793	27	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	2246	junction_1	106354.80560723902	NA	2	NA	TRUE	NA	NA	NA	C	coding	816	2451	372	2822	15.0	0	True	AATAAA	-19
PB.3159.2	chr13	+	4796	27	novel_not_in_catalog	RB1	novel	4793	27	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	122	junction_18	108831.38595678026	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	171	1997	15.0	-8	True	AATAAA	-18
PB.5904.8	chr19	-	4211	28	novel_not_in_catalog	ANKRD27	novel	4450	29	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	66230.87194506478	NA	11	2	TRUE	NA	NA	NA	C	coding	739	2220	116	2335	15.0	10	True	AGTAAA	-14
PB.2825.8	chr12	-	1605	3	full-splice_match	IKBIP	ENST00000299157.4	3189	3	265	1319	144	-1319	multi-exon	FALSE	canonical	1	171322	junction_1	56597.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	110	1243	35.0	-23	False	NA	NA
PB.2825.3	chr12	-	3566	3	full-splice_match	IKBIP	ENST00000299157.4	3189	3	287	-664	166	664	multi-exon	FALSE	canonical	1	171322	junction_1	56597.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	88	1221	100.0	-1	True	NA	NA
PB.5904.3	chr19	-	4276	28	novel_in_catalog	ANKRD27	novel	4450	29	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	1	34448	junction_25	62282.009538873055	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	572	3136	10.0	-15	True	AGTAAA	-17
PB.2825.1	chr12	-	1202	2	full-splice_match	IKBIP	ENST00000393042.3	1368	2	166	0	166	0	multi-exon	FALSE	canonical	1	71057	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	288	1022	30.0	-1	True	AATAAA	-45
PB.2825.6	chr12	-	2870	3	full-splice_match	IKBIP	ENST00000299157.4	3189	3	316	3	195	-3	multi-exon	FALSE	canonical	1	171322	junction_1	56597.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	59	1192	20.0	28	True	AATAAA	-14
PB.2825.7	chr12	-	2171	3	full-splice_match	IKBIP	ENST00000299157.4	3189	3	280	738	159	-738	multi-exon	FALSE	canonical	1	171322	junction_1	56597.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	95	1228	70.0	-8	True	NA	NA
PB.2825.4	chr12	-	3432	3	full-splice_match	IKBIP	ENST00000299157.4	3189	3	290	-533	169	533	multi-exon	FALSE	canonical	1	171322	junction_1	56597.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	85	1218	35.0	2	True	AATAAA	-14
PB.2825.5	chr12	-	2789	2	novel_in_catalog	IKBIP	novel	1368	2	NA	NA	159	-2	no_combination_of_known_junctions	FALSE	canonical	1	12871	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	316	1110	20.0	-8	True	AATAAA	-15
PB.10874.5	chr7	-	3105	5	novel_not_in_catalog	ZC3HAV1L	novel	1753	5	NA	NA	-10	4207	any annotated donor/acceptor	FALSE	canonical	1	979	junction_1	34672.37469784122	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	23	913	20.0	0	True	AATAAA	-16
PB.8812.10	chr4	-	2554	10	full-splice_match	GRSF1	ENST00000514161.5	1765	10	52	-841	52	-1	multi-exon	FALSE	canonical	1	42486	junction_9	438465.1803476349	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	113	1201	40.0	3940	False	AATAAA	-20
PB.3526.6	chr14	+	4690	7	novel_in_catalog	SLC39A9	novel	944	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	19750	junction_1	122004.38394718993	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	326	895	25.0	0	True	ATTAAA	-21
PB.10571.1	chr7	-	1964	10	novel_in_catalog	GUSB	novel	2300	12	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	65282	junction_3	272029.1246899044	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	37	1293	40.0	-7	True	AATAAA	-26
PB.7170.1	chr20	-	2244	1	antisense	novelGene_PLCB1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	338	1017	909	1925	65.0	NA	False	NA	NA
PB.10061.10	chr6	+	3892	12	full-splice_match	MTO1	ENST00000498286.5	10857	12	170	6795	1	989	multi-exon	FALSE	canonical	1	157893	junction_1	33263.251669121375	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	108	2186	85.0	11	True	NA	NA
PB.10571.2	chr7	-	2195	12	full-splice_match	GUSB	ENST00000304895.8	2300	12	101	4	0	0	multi-exon	FALSE	canonical	1	301749	junction_6	203945.47009611974	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	31	1986	45.0	-1	True	AATAAA	-25
PB.1825.1	chr11	+	2671	12	novel_not_in_catalog	TEAD1	novel	2544	13	NA	NA	433	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	100919.39632742018	NA	1	NA	TRUE	NA	NA	NA	B	coding	412	1239	621	1859	55.0	1	True	TATAAA	-38
PB.6035.1	chr19	-	3522	9	full-splice_match	CEACAM1	ENST00000161559.10	3519	9	-4	1	-4	-1	multi-exon	FALSE	canonical	1	71882	junction_3	39992.30806023047	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	140	1720	20.0	-36	False	AATAAA	-20
PB.6035.2	chr19	-	3202	8	full-splice_match	CEACAM1	ENST00000352591.9	3170	8	-35	3	0	-1	multi-exon	FALSE	canonical	1	19122	junction_4	52170.74708755348	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	108	1400	20.0	-4	True	AATAAA	-20
PB.10571.4	chr7	-	2352	10	novel_in_catalog	GUSB	novel	2300	12	NA	NA	-13	0	intron_retention	FALSE	canonical	1	23287	junction_6	294152.06540096627	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	46	819	45.0	-16	True	AATAAA	-25
PB.12292.9	chrX	-	4619	22	full-splice_match	ARHGEF6	ENST00000250617.6	6019	22	1183	217	1183	-217	multi-exon	FALSE	canonical	1	32070	junction_6	79659.74142259525	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	24	2354	25.0	-20	True	TATAAA	-22
PB.2475.5	chr12	+	2833	4	full-splice_match	CREBL2	ENST00000228865.2	3754	4	126	795	126	-795	multi-exon	FALSE	canonical	1	307213	junction_1	42789.94921188334	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	156	518	30.0	-1	True	AATAAA	-13
PB.2475.4	chr12	+	3591	4	full-splice_match	CREBL2	ENST00000228865.2	3754	4	162	1	162	-1	multi-exon	FALSE	canonical	1	307213	junction_1	42789.94921188334	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	120	482	15.0	-14	False	ATTAAA	-17
PB.3371.3	chr14	-	2621	5	novel_not_in_catalog	AL139353.1	novel	3860	25	NA	NA	2	-18532	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	75217.14336963017	NA	1	NA	TRUE	NA	NA	NA	B	coding	109	330	478	807	35.0	-14	True	AATAAA	-17
PB.2946.17	chr12	-	8418	57	novel_in_catalog	GCN1	novel	8675	58	NA	NA	4	-73	no_combination_of_known_junctions	FALSE	canonical	1	14669	junction_21	163745.1640800165	NA	1	NA	TRUE	NA	NA	NA	C	coding	2611	7836	10	7845	45.0	2	True	AATAAA	-12
PB.2475.1	chr12	+	3465	4	full-splice_match	CREBL2	ENST00000228865.2	3754	4	128	161	128	-161	multi-exon	FALSE	canonical	1	307213	junction_1	42789.94921188334	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	154	516	20.0	1	True	TTTAAA	-20
PB.3371.4	chr14	-	2566	4	novel_not_in_catalog	AL139353.1	novel	3860	25	NA	NA	6	-18532	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	72017.37515504312	NA	3	1	TRUE	NA	NA	NA	B	coding	109	330	474	803	35.0	-10	True	AATAAA	-17
PB.2475.3	chr12	+	2548	4	full-splice_match	CREBL2	ENST00000228865.2	3754	4	121	1085	121	-1085	multi-exon	FALSE	canonical	1	307213	junction_1	42789.94921188334	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	161	523	20.0	-55	False	AATGAA	-17
PB.2475.2	chr12	+	2173	4	full-splice_match	CREBL2	ENST00000228865.2	3754	4	-49	1630	16	-1630	multi-exon	FALSE	canonical	1	307213	junction_1	42789.94921188334	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	331	693	35.0	-36	True	AATAAA	-16
PB.2695.1	chr12	+	6143	39	incomplete-splice_match	LRP1	ENST00000243077.7	14897	89	66571	12	-5204	-1	5prime_fragment	FALSE	canonical	1	560583	junction_5	297550.35735806014	NA	0	NA	TRUE	NA	NA	NA	A	coding	1721	5166	194	5359	95.0	-4190	False	AATAAA	-5
PB.10571.7	chr7	-	3263	9	novel_in_catalog	GUSB	novel	2300	12	NA	NA	0	4	intron_retention	FALSE	canonical	1	65282	junction_3	255410.74583718943	NA	3	NA	TRUE	NA	NA	NA	C	coding	359	1080	33	1112	45.0	-3	True	AATAAA	-42
PB.7487.9	chr21	-	3903	20	full-splice_match	SCAF4	ENST00000286835.11	4193	20	87	203	-20	-8	multi-exon	FALSE	canonical	1	146965	junction_19	74630.70929164455	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	297	3740	70.0	-6	True	TTTAAA	-10
PB.838.8	chr1	-	4470	8	novel_not_in_catalog	FCRL5	novel	5390	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	200	junction_1	21896.397738403622	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	159	1589	10.0	-44	True	NA	NA
PB.10571.8	chr7	-	2929	7	novel_in_catalog	GUSB	novel	2300	12	NA	NA	0	2	intron_retention	FALSE	canonical	1	20428	junction_5	348624.0239812639	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	29	433	35.0	1	True	AATAAA	-40
PB.8812.19	chr4	-	2438	9	full-splice_match	GRSF1	ENST00000505068.5	3561	9	1	1122	1	46	multi-exon	FALSE	canonical	1	401834	junction_8	350907.5608144544	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	70	1377	25.0	3335	False	AATAAA	-26
PB.8705.1	chr4	+	3090	2	full-splice_match	FAM200B	ENST00000510032.5	639	2	42	-2493	0	-2	multi-exon	FALSE	canonical	1	47622	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	657	1974	969	2942	55.0	1	True	NA	NA
PB.2984.8	chr12	-	3235	6	novel_in_catalog	RSRC2	novel	3520	10	NA	NA	-11	-43	intron_retention	FALSE	canonical	1	543411	junction_5	261616.40870067762	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	2795	3127	60.0	21	False	AAGAAA	-17
PB.8705.3	chr4	+	3034	2	full-splice_match	FAM200B	ENST00000503617.1	1027	2	42	-2049	3	-2	multi-exon	FALSE	canonical	1	84826	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	657	1974	913	2886	55.0	4	True	NA	NA
PB.8705.2	chr4	+	2968	2	full-splice_match	FAM200B	ENST00000422728.2	2962	2	-8	2	2	-2	multi-exon	FALSE	canonical	1	213460	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	847	2820	55.0	3	True	NA	NA
PB.8705.5	chr4	+	2421	3	full-splice_match	FAM200B	ENST00000507305.5	800	3	16	-1637	1	-2	multi-exon	FALSE	canonical	1	145635	junction_2	33912.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	831	2273	55.0	12	True	NA	NA
PB.8705.4	chr4	+	4772	1	novel_in_catalog	FAM200B	novel	662	3	NA	NA	-1	8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	10	True	NA	NA
PB.8705.6	chr4	+	2331	4	full-splice_match	FAM200B	ENST00000515697.5	607	4	102	-1826	0	0	multi-exon	FALSE	canonical	1	62961	junction_3	61540.56467259804	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	8	True	AATAAA	-7
PB.3145.6	chr13	-	3470	8	novel_in_catalog	SLC25A30	novel	6041	4	NA	NA	6	7	no_combination_of_known_junctions	FALSE	canonical	1	465	junction_5	49786.747842930155	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	380	823	50.0	-23	True	AATAAA	-15
PB.3145.7	chr13	-	2689	1	incomplete-splice_match	SLC25A30	ENST00000523988.5	6041	4	8368	11	6342	7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-4588	False	AATAAA	-15
PB.3145.4	chr13	-	3797	8	novel_not_in_catalog	SLC25A30	novel	6041	4	NA	NA	11	7	any annotated donor/acceptor	FALSE	canonical	1	15357	junction_6	60131.6006354362	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	278	934	50.0	-33	False	AATAAA	-15
PB.3145.5	chr13	-	3557	9	novel_in_catalog	SLC25A30	novel	6041	4	NA	NA	29	7	combination_of_known_junctions	FALSE	canonical	1	15357	junction_7	46680.2899111338	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	260	910	50.0	-15	True	AATAAA	-15
PB.3145.2	chr13	-	3706	10	full-splice_match	SLC25A30	ENST00000519676.5	3670	10	-43	7	32	-7	multi-exon	FALSE	canonical	1	80613	junction_9	26094.55006294713	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	180	1055	40.0	-12	True	AATAAA	-19
PB.3145.3	chr13	-	3965	9	novel_not_in_catalog	SLC25A30	novel	6041	4	NA	NA	-9	7	any annotated donor/acceptor	FALSE	canonical	1	17761	junction_1	46182.12087756473	NA	1	1	TRUE	NA	NA	NA	C	coding	293	882	221	1102	50.0	-53	False	AATAAA	-15
PB.3145.1	chr13	-	3801	10	novel_not_in_catalog	SLC25A30	novel	6041	4	NA	NA	8	-5	any annotated donor/acceptor	FALSE	canonical	1	11188	junction_9	43826.06587155386	NA	1	1	TRUE	NA	NA	NA	C	coding	291	876	273	1148	35.0	-36	False	AATAAA	-21
PB.8684.1	chr4	+	4182	19	full-splice_match	MAN2B2	ENST00000285599.7	5143	19	0	961	0	0	multi-exon	TRUE	canonical	1	137568	junction_1	57665.88577936817	NA	0	NA	TRUE	NA	NA	NA	A	coding	1009	3030	37	3066	25.0	-15	True	NA	NA
PB.6622.1	chr2	-	2577	1	intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.5169.2	chr17	-	3363	5	novel_in_catalog	CYB561	novel	3007	6	NA	NA	0	5	intron_retention	FALSE	canonical	1	150891	junction_4	116946.43668657674	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	61	537	10.0	14	True	AATAAA	-19
PB.1731.1	chr10	+	2613	1	antisense	novelGene_RARRES2P2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	26	NA	NA	NA	NA	NA	A	coding	207	624	2	625	70.0	NA	False	NA	NA
PB.10430.18	chr7	-	2939	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	1	10237	1	61	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	233	1798	55.0	1	True	TTTAAA	-18
PB.2984.5	chr12	-	4288	9	novel_in_catalog	RSRC2	novel	3520	10	NA	NA	-4	22	intron_retention	FALSE	canonical	1	397956	junction_3	285275.8126681966	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	3190	3798	20.0	3	True	AATAAA	-35
PB.10430.16	chr7	-	2894	10	novel_in_catalog	FAM126A	novel	13177	11	NA	NA	0	93	combination_of_known_junctions	FALSE	canonical	1	5056	junction_9	86514.39191741167	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	588	1721	75.0	-1	True	NA	NA
PB.10430.17	chr7	-	2815	10	novel_in_catalog	FAM126A	novel	13177	11	NA	NA	-1	92	no_combination_of_known_junctions	FALSE	canonical	1	18260	junction_5	83314.16528455247	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	660	1643	75.0	-2	True	NA	NA
PB.10430.14	chr7	-	3225	12	full-splice_match	FAM126A	ENST00000409923.5	3130	12	-2	-93	2	93	multi-exon	FALSE	canonical	1	113725	junction_2	53141.989402787236	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	191	1450	75.0	1	True	NA	NA
PB.1828.9	chr11	-	2403	9	novel_not_in_catalog	BTBD10	novel	2504	9	NA	NA	11	-1	any annotated donor/acceptor	FALSE	canonical	1	8720	junction_2	67817.30354738014	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	218	1153	30.0	-44	True	AATAAA	-13
PB.10430.12	chr7	-	3954	12	full-splice_match	FAM126A	ENST00000409923.5	3130	12	-46	-778	0	778	multi-exon	FALSE	canonical	1	113725	junction_2	53141.989402787236	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	235	1494	15.0	-1	True	TTTAAA	-30
PB.10430.13	chr7	-	3655	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	1	9521	1	777	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	233	1798	15.0	1	True	TTTAAA	-29
PB.10430.10	chr7	-	5452	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	-4	7729	-3	-671	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	238	1803	65.0	-4	True	TTTAAA	-9
PB.10430.11	chr7	-	5222	10	novel_not_in_catalog	FAM126A	novel	13177	11	NA	NA	0	-671	any annotated donor/acceptor	FALSE	canonical	1	1682	junction_7	88825.35872787569	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	440	1573	65.0	-1	True	TTTAAA	-9
PB.5169.1	chr17	-	2993	6	full-splice_match	CYB561	ENST00000360793.7	3001	6	14	-6	-10	6	multi-exon	FALSE	canonical	1	150891	junction_5	110192.43622790086	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	134	889	10.0	-59	True	AATAAA	-20
PB.1604.2	chr10	+	4353	16	novel_in_catalog	SEMA4G	novel	2024	13	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	40558	junction_1	9118.036252030002	NA	0	NA	TRUE	NA	NA	NA	B	coding	843	2532	473	3004	25.0	0	True	AATAAA	-14
PB.6735.5	chr2	-	3770	21	full-splice_match	SAP130	ENST00000643581.1	4143	21	28	345	28	-345	multi-exon	FALSE	canonical	1	59031	junction_20	65553.2886235313	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	160	3333	10.0	0	True	AATAAA	-19
PB.5169.4	chr17	-	2164	6	full-splice_match	CYB561	ENST00000360793.7	3001	6	70	767	0	74	multi-exon	FALSE	canonical	1	150891	junction_5	110192.43622790086	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	78	833	90.0	-3	True	NA	NA
PB.10492.1	chr7	-	2429	2	full-splice_match	TRGV7	ENST00000427089.1	353	2	-170	-1906	-170	1906	multi-exon	FALSE	canonical	1	18366	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	128	387	171	557	20.0	-6	True	NA	NA
PB.6735.2	chr2	-	3910	20	novel_in_catalog	SAP130	novel	4173	21	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	2819	junction_19	93013.39639873823	NA	0	NA	TRUE	NA	NA	NA	C	coding	1021	3066	56	3121	15.0	-1	True	AATAAA	-27
PB.5169.5	chr17	-	2074	6	full-splice_match	CYB561	ENST00000360793.7	3001	6	16	911	-8	1	multi-exon	FALSE	canonical	1	150891	junction_5	110192.43622790086	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	132	887	70.0	-57	True	NA	NA
PB.6735.3	chr2	-	4027	20	novel_in_catalog	SAP130	novel	4173	21	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	49877	junction_6	74434.13041414334	NA	1	NA	TRUE	NA	NA	NA	C	coding	1022	3069	171	3239	10.0	-11	True	AATAAA	-26
PB.10436.10	chr7	-	3134	8	full-splice_match	IGF2BP3	ENST00000619562.4	2126	8	-91	-917	8	-1	multi-exon	FALSE	canonical	1	4929	junction_6	40206.656719645674	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	386	982	15.0	3	True	AATAAA	-21
PB.8853.47	chr4	-	4397	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	27952	junction_26	352111.521208373	NA	0	NA	TRUE	NA	NA	NA	C	coding	1205	3618	369	3986	20.0	9454	False	ATTAAA	-12
PB.240.12	chr1	-	3788	21	novel_not_in_catalog	PUM1	novel	4631	18	NA	NA	3	69	any annotated donor/acceptor	FALSE	canonical	1	34118	junction_8	186391.33806791427	NA	3	NA	TRUE	NA	NA	NA	C	coding	1081	3246	89	3334	75.0	24	True	NA	NA
PB.10436.15	chr7	-	4157	15	novel_not_in_catalog	IGF2BP3	novel	4250	15	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	26	junction_1	43089.99874491452	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	251	2134	15.0	46	True	AATAAA	-20
PB.10436.16	chr7	-	3499	8	novel_not_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-24	-2	any annotated donor/acceptor	FALSE	canonical	1	4822	junction_7	41290.179682390364	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	638	1348	15.0	-1	True	AATAAA	-20
PB.10436.18	chr7	-	5211	14	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	192	-6	intron_retention	FALSE	canonical	1	5782	junction_13	42538.2981258511	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	372	1301	10.0	-1	True	AATAAA	-16
PB.10436.19	chr7	-	3798	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	10	442	-2	-442	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	348	2087	30.0	-1	True	AAAACA	-23
PB.12092.1	chrX	-	2542	3	novel_in_catalog	HSD17B10	novel	556	3	NA	NA	4	-3	intron_retention	FALSE	canonical	1	1010460	junction_2	574495.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-12
PB.592.4	chr1	-	1987	8	incomplete-splice_match	PSMA5	ENST00000271308.8	3729	9	-98	9677	-22	3162	3prime_fragment	FALSE	canonical	1	1610726	junction_7	481922.11999065336	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	120	812	75.0	-13	True	NA	NA
PB.3178.2	chr13	+	4006	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-28	-1420	-12	-1087	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2280	1727	4006	65.0	-25	True	NA	NA
PB.3178.3	chr13	+	5141	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-27	-2556	-11	49	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	1726	4026	85.0	-24	True	NA	NA
PB.3178.1	chr13	+	1610	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-77	1025	-61	-50	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	83	1561	30.0	-74	False	ATTAAA	-29
PB.3178.6	chr13	+	1665	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-22	915	-6	0	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	28	1506	15.0	-19	True	AATAAA	-24
PB.3178.7	chr13	+	2440	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-20	138	-4	-131	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	720	1719	2438	75.0	-17	True	NA	NA
PB.3178.4	chr13	+	2484	4	full-splice_match	ALG11	ENST00000521508.1	2558	4	-21	95	-5	-88	multi-exon	FALSE	canonical	1	83076	junction_2	39798.1000998233	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	765	1720	2484	60.0	-18	True	AGTAAA	-19
PB.3178.5	chr13	+	3069	3	novel_in_catalog	ALG11	novel	1404	2	NA	NA	-7	-1087	combination_of_known_junctions	FALSE	canonical	1	13375	junction_2	62836.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2280	790	3069	65.0	-20	True	NA	NA
PB.3114.12	chr13	+	6770	2	incomplete-splice_match	UFM1	ENST00000494372.1	777	3	6	-1816	4	1816	intron_retention	FALSE	canonical	1	712066	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	1	True	NA	NA
PB.3114.13	chr13	+	3604	2	incomplete-splice_match	UFM1	ENST00000464423.1	585	3	-30	1022	5	-1022	3prime_fragment	FALSE	canonical	1	712066	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	2	True	NA	NA
PB.3114.10	chr13	+	2507	5	novel_in_catalog	UFM1	novel	777	3	NA	NA	1	-620	no_combination_of_known_junctions	FALSE	canonical	1	7778	junction_3	267492.74489074934	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATACA	-14
PB.3178.9	chr13	+	2002	2	full-splice_match	ALG11	ENST00000616513.1	1983	2	-13	-6	0	6	multi-exon	FALSE	canonical	1	14007	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	911	1387	15.0	-13	True	NA	NA
PB.3114.16	chr13	+	2565	7	novel_not_in_catalog	UFM1	novel	777	3	NA	NA	-10	-614	any annotated donor/acceptor	FALSE	canonical	1	2799	junction_2	234900.16596891163	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	17	True	AATACA	-20
PB.3114.14	chr13	+	2463	6	novel_not_in_catalog	UFM1	novel	777	3	NA	NA	5	-735	any annotated donor/acceptor	FALSE	canonical	1	123	junction_4	242691.0882574801	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	2	True	ATTAAA	-20
PB.3114.15	chr13	+	2473	6	novel_not_in_catalog	UFM1	novel	777	3	NA	NA	-12	-735	any annotated donor/acceptor	FALSE	canonical	1	12	junction_3	245053.70240614607	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	15	True	ATTAAA	-20
PB.11875.8	chr9	-	3544	18	full-splice_match	RALGDS	ENST00000372047.7	3598	18	-64	118	-64	-117	multi-exon	FALSE	canonical	1	88107	junction_17	144881.99981992264	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	87	2795	80.0	-1	True	NA	NA
PB.4894.8	chr17	+	3085	20	full-splice_match	RHOT1	ENST00000578205.5	2771	20	-159	-155	-23	-8	multi-exon	FALSE	canonical	1	9618	junction_4	150608.85367810447	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	685	2160	30.0	12	True	AATAAA	-21
PB.4894.9	chr17	+	3036	19	full-splice_match	RHOT1	ENST00000333942.10	3133	19	53	44	-30	-1	multi-exon	FALSE	canonical	1	9618	junction_3	147107.47612578623	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	187	2043	15.0	5	True	AATAAA	-19
PB.358.8	chr1	+	3371	1	genic	DPH2	novel	NA	NA	NA	NA	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	264	795	1286	2080	10.0	-11	True	AATAAA	-15
PB.358.9	chr1	+	2933	4	novel_in_catalog	DPH2	novel	593	3	NA	NA	-1	2	intron_retention	FALSE	canonical	1	317133	junction_1	40033.87893882991	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	1013	2101	10.0	-11	True	AATAAA	-17
PB.4894.4	chr17	+	2865	20	incomplete-splice_match	RHOT1	ENST00000358365.7	3297	21	-18	13827	-6	465	3prime_fragment	FALSE	canonical	1	9618	junction_3	153738.9493257088	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	246	2243	80.0	-129	False	TATAAA	-14
PB.4894.5	chr17	+	2920	20	full-splice_match	RHOT1	ENST00000545287.6	2516	20	-61	-343	1	-47	multi-exon	FALSE	canonical	1	9618	junction_3	149948.87703377358	NA	2	NA	TRUE	NA	NA	NA	C	coding	659	1980	218	2197	35.0	-101	False	AATAAA	-18
PB.4894.6	chr17	+	2945	21	full-splice_match	RHOT1	ENST00000358365.7	3297	21	80	272	9	-48	multi-exon	FALSE	canonical	1	9618	junction_3	151875.98166138714	NA	3	NA	TRUE	NA	NA	NA	C	coding	691	2076	148	2223	30.0	-31	False	AATAAA	-17
PB.4894.7	chr17	+	2910	20	full-splice_match	RHOT1	ENST00000394692.6	2960	20	-178	228	27	-4	multi-exon	FALSE	canonical	1	9618	junction_3	151265.44842731566	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	192	2144	30.0	0	True	AATAAA	-20
PB.358.2	chr1	+	2748	5	novel_in_catalog	DPH2	novel	593	3	NA	NA	-13	2	intron_retention	FALSE	canonical	1	276088	junction_2	53387.425478758574	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	1026	1916	10.0	-23	True	AATAAA	-17
PB.4894.1	chr17	+	2740	19	full-splice_match	RHOT1	ENST00000333942.10	3133	19	123	270	9	-3	multi-exon	FALSE	canonical	1	9618	junction_3	147107.47612578623	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	117	1973	35.0	0	True	AATAAA	-21
PB.4894.2	chr17	+	3120	20	full-splice_match	RHOT1	ENST00000545287.6	2516	20	9	-613	9	-1	multi-exon	FALSE	canonical	1	9618	junction_3	149948.87703377358	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	148	2127	15.0	-31	False	AATAAA	-19
PB.4894.3	chr17	+	3207	21	full-splice_match	RHOT1	ENST00000358365.7	3297	21	89	1	-5	-1	multi-exon	FALSE	canonical	1	9618	junction_3	151875.98166138714	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	139	2214	15.0	-22	False	AATAAA	-19
PB.565.4	chr1	-	3989	12	novel_not_in_catalog	DBT	novel	10799	11	NA	NA	1	-6996	any annotated donor/acceptor	FALSE	canonical	1	9987	junction_10	61079.135060879205	NA	2	NA	TRUE	NA	NA	NA	C	coding	301	906	744	1649	25.0	0	True	NA	NA
PB.7325.1	chr20	+	2401	13	full-splice_match	MMP9	ENST00000372330.3	2336	13	-66	1	-66	-1	multi-exon	FALSE	canonical	1	246441	junction_10	53607.427099638495	NA	0	NA	TRUE	NA	NA	NA	A	coding	707	2124	86	2209	40.0	-7681	False	AATAAA	-20
PB.8282.4	chr3	+	5180	2	full-splice_match	DUBR	ENST00000466734.5	2737	2	1	-2444	1	2444	multi-exon	FALSE	canonical	1	38165	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	19	60	411	470	25.0	1	True	NA	NA
PB.565.5	chr1	-	3649	11	full-splice_match	DBT	ENST00000370132.8	10799	11	-3	7153	-3	-7153	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	18	1466	30.0	-4	True	NA	NA
PB.6884.19	chr2	+	5284	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-15	14860	-15	-421	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	431	2812	20.0	-3	True	NA	NA
PB.565.6	chr1	-	3536	11	full-splice_match	DBT	ENST00000370132.8	10799	11	-3	7266	-3	-7266	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	18	1466	85.0	-4	True	NA	NA
PB.9797.3	chr6	+	1589	11	full-splice_match	BTN3A2	ENST00000396948.5	1494	11	-61	-34	1	34	multi-exon	FALSE	canonical	1	40158	junction_10	89423.42938201375	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	221	1219	60.0	7	True	AATAAA	-13
PB.838.7	chr1	-	4482	8	full-splice_match	FCRL5	ENST00000368189.3	4424	8	-57	-1	8	1	multi-exon	FALSE	canonical	1	5252	junction_6	18712.98811531931	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	151	1929	15.0	-36	True	NA	NA
PB.11335.4	chr8	+	1885	5	incomplete-splice_match	SQLE	ENST00000265896.9	2961	11	0	13148	0	3428	3prime_fragment	FALSE	canonical	1	606505	junction_4	152889.70802346375	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	899	1843	50.0	1	True	NA	NA
PB.8201.1	chr3	-	1462	10	full-splice_match	PDHB	ENST00000302746.10	1527	10	20	45	-3	-3	multi-exon	FALSE	canonical	1	1012312	junction_8	186898.6371222991	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	24	1103	20.0	-4	True	ATTAAA	-18
PB.6360.8	chr2	+	3033	7	novel_not_in_catalog	RAB10	novel	1292	5	NA	NA	-8	-44	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	633563.7249349684	NA	1	1	TRUE	NA	NA	NA	C	coding	118	357	288	644	20.0	15	True	AATAAA	-14
PB.6360.9	chr2	+	2281	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-10	1264	-7	843	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	1	1	TRUE	NA	NA	NA	C	coding	200	603	510	1112	30.0	16	True	AATAAA	-11
PB.565.2	chr1	-	3979	12	novel_not_in_catalog	DBT	novel	10799	11	NA	NA	1	-6670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	51201.21155768882	NA	6	NA	TRUE	NA	NA	NA	C	coding	482	1449	14	1462	25.0	0	True	NA	NA
PB.6884.14	chr2	+	3990	23	novel_not_in_catalog	DNAJC10	novel	5783	23	NA	NA	-15	663	any annotated donor/acceptor	FALSE	canonical	1	15558	junction_12	244740.37845208085	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	431	2614	45.0	-3	True	ATTAAA	-18
PB.6360.1	chr2	+	1461	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	2	2072	2	35	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	498	1100	35.0	28	True	AATAAA	-19
PB.6360.2	chr2	+	1215	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-26	2346	-23	40	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	526	1128	25.0	0	True	AATAAA	-25
PB.6360.3	chr2	+	4235	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-26	-674	-23	674	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	526	1128	100.0	0	True	NA	NA
PB.6360.4	chr2	+	3304	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-10	241	-7	-241	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	510	1112	25.0	16	True	TATAAA	-3
PB.6360.5	chr2	+	3119	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	372	44	372	-44	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	128	730	20.0	-1	True	AATAAA	-14
PB.6360.6	chr2	+	4668	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-12	-1121	-9	1121	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	512	1114	30.0	14	True	AATAAA	-18
PB.6360.7	chr2	+	3736	6	full-splice_match	RAB10	ENST00000264710.4	3535	6	-11	-190	-8	190	multi-exon	FALSE	canonical	1	1274476	junction_1	246031.44316578726	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	511	1113	30.0	15	True	ATTAAA	-25
PB.9797.2	chr6	+	1678	11	full-splice_match	BTN3A2	ENST00000377708.6	1634	11	-65	21	-5	-21	multi-exon	FALSE	canonical	1	66646	junction_2	74077.01525439588	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	227	1225	100.0	1	True	NA	NA
PB.823.7	chr1	-	1362	5	full-splice_match	GLMP	ENST00000622703.4	1364	5	0	2	0	-1	multi-exon	TRUE	canonical	1	68623	junction_4	231912.41846276796	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	45	1007	10.0	-18	True	AATAGA	-19
PB.823.6	chr1	-	1604	6	full-splice_match	GLMP	ENST00000362007.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	1	265221	junction_5	147316.38046734655	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	28	1248	10.0	-1	True	AATAGA	-20
PB.5269.1	chr17	+	2153	6	full-splice_match	SPHK1	ENST00000323374.8	2138	6	-10	-5	-10	0	multi-exon	FALSE	canonical	1	49277	junction_1	184093.7926238688	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	467	1879	5.0	-2	True	AATAAA	-18
PB.7834.2	chr22	-	4709	4	full-splice_match	TCF20	ENST00000335626.8	6237	4	2508	-980	2508	-63	multi-exon	FALSE	canonical	1	137374	junction_1	50496.82883992705	NA	2	NA	TRUE	NA	NA	NA	C	coding	1108	3327	118	3444	90.0	6421	False	GATAAA	-28
PB.5269.3	chr17	+	1821	5	full-splice_match	SPHK1	ENST00000392496.3	1779	5	-45	3	-45	-1	multi-exon	FALSE	canonical	1	125364	junction_1	148731.05072411746	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	399	1553	5.0	-160	False	AATAAA	-12
PB.5269.2	chr17	+	1788	6	full-splice_match	SPHK1	ENST00000592299.5	1821	6	32	1	-9	-1	multi-exon	FALSE	canonical	1	110435	junction_1	168115.5953210766	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	361	1515	5.0	-1	True	AATAAA	-17
PB.7834.7	chr22	-	3678	4	full-splice_match	TCF20	ENST00000335626.8	6237	4	2940	-381	-2292	381	multi-exon	FALSE	canonical	1	137374	junction_1	50496.82883992705	NA	2	NA	TRUE	NA	NA	NA	C	coding	951	2856	157	3012	40.0	6853	False	AATAAA	-15
PB.7834.6	chr22	-	3948	5	full-splice_match	TCF20	ENST00000404876.1	1058	5	-2464	-426	-2464	384	multi-exon	FALSE	canonical	1	48887	junction_2	81364.03325602475	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3189	29	3217	35.0	6681	False	AATAAA	-18
PB.7834.5	chr22	-	2485	4	full-splice_match	TCF20	ENST00000335626.8	6237	4	4732	-980	-500	-63	multi-exon	FALSE	canonical	1	137374	junction_1	50496.82883992705	NA	2	NA	TRUE	NA	NA	NA	C	coding	251	756	465	1220	90.0	8645	False	GATAAA	-28
PB.7834.4	chr22	-	3865	5	full-splice_match	TCF20	ENST00000359486.7	7410	5	3482	63	-1752	-63	multi-exon	FALSE	canonical	1	66261	junction_2	74986.89062221143	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	82	2538	90.0	7393	False	GATAAA	-28
PB.7969.2	chr3	-	6441	22	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	7	-5	combination_of_known_junctions	TRUE	canonical	1	48855	junction_21	76537.2194429544	NA	2	NA	TRUE	NA	NA	NA	C	coding	795	2388	258	2645	30.0	-23	True	AATAAA	-16
PB.6884.12	chr2	+	1519	12	incomplete-splice_match	DNAJC10	ENST00000491074.5	3962	25	-40	37819	-16	-561	3prime_fragment	FALSE	canonical	1	74487	junction_11	197613.54787945113	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	432	1430	10.0	-4	True	AATAAA	-20
PB.7969.4	chr3	-	6609	23	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	-39	-9	combination_of_known_junctions	FALSE	canonical	1	13834	junction_20	92735.03809494594	NA	1	NA	TRUE	NA	NA	NA	C	coding	795	2388	430	2817	40.0	47	False	AATAAA	-12
PB.7969.5	chr3	-	6607	23	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	1	3029	junction_21	96805.12534229369	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	429	2816	35.0	11	True	AATAAA	-11
PB.7969.6	chr3	-	3455	22	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	-1	243	combination_of_known_junctions	FALSE	canonical	1	48855	junction_21	76537.2194429544	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	234	2621	60.0	1	True	AAAACA	-37
PB.7969.7	chr3	-	3386	24	novel_not_in_catalog	TBC1D5	novel	7854	22	NA	NA	1	-18	any annotated donor/acceptor	FALSE	canonical	1	197	junction_22	103973.09826749492	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	426	2813	85.0	11	True	AATAGA	-35
PB.9962.9	chr6	+	4237	8	full-splice_match	C6orf89	ENST00000355190.7	1309	8	90	-3018	90	1985	multi-exon	FALSE	canonical	1	15038	junction_1	160873.63659616036	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	74	1138	90.0	2	True	NA	NA
PB.9962.8	chr6	+	2359	9	full-splice_match	C6orf89	ENST00000480824.6	6861	9	98	4404	88	5	multi-exon	FALSE	canonical	1	4737	junction_1	186247.5101081891	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	197	1240	25.0	0	True	TATAAA	-20
PB.11122.10	chr8	+	3175	19	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	2350	junction_18	83933.84846678034	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	21	2714	30.0	1	True	AATAAA	-11
PB.9962.1	chr6	+	2238	8	full-splice_match	C6orf89	ENST00000355190.7	1309	8	109	-1038	109	5	multi-exon	FALSE	canonical	1	15038	junction_1	160873.63659616036	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	55	1119	25.0	21	True	TATAAA	-20
PB.11006.3	chr8	+	3463	10	full-splice_match	LPL	ENST00000650287.1	3565	10	102	0	-17	0	multi-exon	FALSE	canonical	1	304524	junction_5	90525.27406322624	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	87	1514	25.0	1	True	AATAAA	-24
PB.9962.3	chr6	+	4339	9	full-splice_match	C6orf89	ENST00000480824.6	6861	9	98	2424	88	1985	multi-exon	FALSE	canonical	1	4737	junction_1	186247.5101081891	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	197	1240	90.0	0	True	NA	NA
PB.9962.2	chr6	+	2895	9	novel_not_in_catalog	C6orf89	novel	2565	10	NA	NA	-6	569	any annotated donor/acceptor	FALSE	canonical	1	243	junction_1	187335.27910457095	NA	2	1	TRUE	NA	NA	NA	C	coding	347	1044	169	1212	35.0	-6	True	AATACA	-26
PB.9962.5	chr6	+	2216	8	novel_not_in_catalog	C6orf89	novel	2565	10	NA	NA	79	12	any annotated donor/acceptor	FALSE	canonical	1	13926	junction_2	205750.492957874	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	365	1090	15.0	-9	False	TATAAA	-27
PB.9962.4	chr6	+	2801	8	full-splice_match	C6orf89	ENST00000355190.7	1309	8	109	-1601	109	568	multi-exon	FALSE	canonical	1	15038	junction_1	160873.63659616036	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	55	1119	30.0	21	True	AATACA	-25
PB.9962.7	chr6	+	3056	8	full-splice_match	C6orf89	ENST00000355190.7	1309	8	88	-1835	88	802	multi-exon	FALSE	canonical	1	15038	junction_1	160873.63659616036	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	76	1140	10.0	0	True	NA	NA
PB.9962.6	chr6	+	4069	8	full-splice_match	C6orf89	ENST00000355190.7	1309	8	88	-2848	88	1815	multi-exon	FALSE	canonical	1	15038	junction_1	160873.63659616036	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	76	1140	65.0	0	True	NA	NA
PB.10335.1	chr6	+	3363	2	intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	107	324	538	861	85.0	NA	False	NA	NA
PB.8367.2	chr3	-	2366	15	full-splice_match	TXNRD3	ENST00000523403.2	2351	15	-18	3	-18	-3	multi-exon	FALSE	canonical	1	5656	junction_3	20068.842611885026	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	676	1947	25.0	-18	True	AATATA	-22
PB.6294.1	chr2	+	2584	1	genic	RSAD2	novel	NA	NA	NA	NA	-47	-8902	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-440	False	NA	NA
PB.6294.2	chr2	+	3780	7	novel_in_catalog	RSAD2	novel	769	2	NA	NA	-4	-910	combination_of_known_junctions	FALSE	canonical	1	2438	junction_1	59799.612856652806	NA	3	NA	TRUE	NA	NA	NA	B	coding	361	1086	1308	2393	25.0	-375	False	AATAAA	-22
PB.6294.3	chr2	+	4599	7	novel_in_catalog	RSAD2	novel	769	2	NA	NA	79	-8	combination_of_known_junctions	FALSE	canonical	1	2438	junction_1	59799.612856652806	NA	3	NA	TRUE	NA	NA	NA	B	coding	361	1086	1225	2310	30.0	22	True	AATAAA	-15
PB.1343.8	chr10	-	3892	14	novel_not_in_catalog	ACBD5	novel	3921	13	NA	NA	44	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	107266.62171105128	NA	2	1	TRUE	NA	NA	NA	C	coding	532	1599	84	1682	35.0	2274	False	AATAAA	-12
PB.1343.9	chr10	-	3908	13	full-splice_match	ACBD5	ENST00000396271.7	3921	13	7	6	7	-3	multi-exon	FALSE	canonical	1	65396	junction_12	70749.2716893707	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	121	1698	35.0	-12	True	AATAAA	-12
PB.7842.8	chr22	-	2580	17	novel_not_in_catalog	ARFGAP3	novel	2857	16	NA	NA	10	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	151196.76735444312	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	48	1598	25.0	4	True	AATAAA	-11
PB.4762.1	chr17	-	1727	1	full-splice_match	BORCS6	ENST00000389017.5	2575	1	833	15	833	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	223	672	337	1008	20.0	-3	True	ATTAAA	-14
PB.7842.4	chr22	-	2608	15	novel_in_catalog	ARFGAP3	novel	2857	16	NA	NA	-1	-28	no_combination_of_known_junctions	FALSE	canonical	1	874	junction_10	159652.39747704501	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	762	1550	20.0	-36	True	AATAAA	-13
PB.7842.5	chr22	-	2454	14	novel_in_catalog	ARFGAP3	novel	2857	16	NA	NA	-4	-28	combination_of_known_junctions	FALSE	canonical	1	1783	junction_11	166186.0028025203	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	62	1396	20.0	-10	True	AATAAA	-13
PB.1343.2	chr10	-	3938	14	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	15	0	combination_of_known_junctions	TRUE	canonical	1	57442	junction_9	97700.6248941636	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	113	1723	20.0	-4	True	AATAAA	-17
PB.1343.3	chr10	-	3851	13	full-splice_match	ACBD5	ENST00000375905.8	3848	13	-1	-2	-1	0	multi-exon	FALSE	canonical	1	23977	junction_12	80334.98713702241	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	164	1636	20.0	-32	True	AATAAA	-17
PB.1343.4	chr10	-	3848	13	novel_not_in_catalog	ACBD5	novel	3921	13	NA	NA	192	0	any annotated donor/acceptor	FALSE	canonical	1	1427	junction_12	85746.02739809908	NA	3	NA	TRUE	NA	NA	NA	C	coding	490	1473	161	1633	20.0	9898	False	AATAAA	-17
PB.1343.5	chr10	-	3659	13	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	-20	0	no_combination_of_known_junctions	FALSE	canonical	1	12460	junction_6	118442.5779667503	NA	3	NA	TRUE	NA	NA	NA	C	coding	433	1302	143	1444	20.0	-11	True	AATAAA	-17
PB.7842.2	chr22	-	2548	15	novel_in_catalog	ARFGAP3	novel	2857	16	NA	NA	-10	-24	combination_of_known_junctions	FALSE	canonical	1	54522	junction_4	143066.79608026968	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	68	1486	15.0	-16	True	AATAAA	-17
PB.7842.3	chr22	-	2710	17	novel_not_in_catalog	ARFGAP3	novel	2857	16	NA	NA	9	-28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	183258.46484746618	NA	3	1	TRUE	NA	NA	NA	C	coding	344	1035	618	1652	20.0	3	True	AATAAA	-13
PB.10726.1	chr7	+	1874	5	novel_in_catalog	MEPCE	novel	666	2	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	5350	junction_1	337368.2019529997	NA	0	NA	TRUE	NA	NA	NA	A	coding	220	663	648	1310	10.0	0	True	AATAAA	-27
PB.370.1	chr1	-	3600	21	full-splice_match	HECTD3	ENST00000372172.4	3610	21	9	1	9	-1	multi-exon	FALSE	canonical	1	131521	junction_20	83169.14420641528	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	64	2649	20.0	3	True	AATAAA	-20
PB.370.2	chr1	-	3637	21	novel_not_in_catalog	HECTD3	novel	2385	6	NA	NA	-16	-7	any annotated donor/acceptor	FALSE	canonical	1	1948	junction_13	108342.01811988735	NA	14	1	TRUE	NA	NA	NA	C	coding	867	2604	89	2692	20.0	-22	True	AATAAA	-14
PB.370.3	chr1	-	3644	21	novel_not_in_catalog	HECTD3	novel	2385	6	NA	NA	-16	-9	any annotated donor/acceptor	FALSE	canonical	1	106	junction_18	108027.93485940338	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	89	2701	25.0	-22	True	AATAAA	-12
PB.11379.5	chr8	-	2330	6	full-splice_match	PYCR3	ENST00000495276.5	2332	6	-11	13	-11	-13	multi-exon	FALSE	canonical	1	101862	junction_5	34987.76904576798	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	38	862	25.0	8462	False	AATAAA	-21
PB.8975.8	chr4	+	3003	19	novel_not_in_catalog	HSPA4L	novel	3020	20	NA	NA	-305	327	any annotated donor/acceptor	FALSE	canonical	1	82	junction_1	50528.587482242336	NA	2	NA	TRUE	NA	NA	NA	C	coding	812	2439	70	2508	40.0	893	False	ATTAAA	-19
PB.11195.1	chr8	-	1657	4	intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3335.5331741050873	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.11782.1	chr9	+	2235	1	genic	MIR181A2HG	novel	NA	NA	NA	NA	-53	-37983	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.750.11	chr1	-	4379	18	full-splice_match	POGZ	ENST00000531094.5	4415	18	36	0	0	0	multi-exon	FALSE	canonical	1	33806	junction_13	132232.27803041958	NA	0	NA	TRUE	NA	NA	NA	C	coding	1348	4047	30	4076	80.0	-1	True	TTTAAA	-32
PB.10843.1	chr7	+	2276	12	full-splice_match	MEST	ENST00000341441.9	2443	12	163	4	-2	0	multi-exon	TRUE	canonical	1	178076	junction_1	117271.92384629651	NA	1	NA	TRUE	NA	NA	NA	A	coding	326	981	64	1044	25.0	1	True	AATAAA	-14
PB.7807.7	chr22	-	2504	12	full-splice_match	ST13	ENST00000216218.7	3595	12	488	603	31	-603	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	37	1104	20.0	5542	False	GATAAA	-18
PB.8165.1	chr3	+	2151	4	novel_in_catalog	GLYCTK	novel	889	5	NA	NA	-15	13	intron_retention	TRUE	canonical	1	41646	junction_3	39522.06073405923	NA	2	NA	TRUE	NA	NA	NA	B	coding	180	543	1360	1902	20.0	-2261	False	AATAAA	-32
PB.8904.16	chr4	-	2137	8	full-splice_match	UBE2D3	ENST00000394803.9	2227	8	95	-5	0	5	multi-exon	FALSE	canonical	1	151175	junction_6	406515.0073236998	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	250	693	20.0	-3	True	AATAAA	-22
PB.9797.4	chr6	+	1408	10	full-splice_match	BTN3A2	ENST00000508906.6	3733	10	46	2279	1	-195	multi-exon	FALSE	canonical	1	9079	junction_2	85447.43728091875	NA	1	1	TRUE	NA	NA	NA	C	coding	292	879	251	1129	80.0	7	True	NA	NA
PB.3775.1	chr15	+	1518	9	full-splice_match	KNSTRN	ENST00000608100.5	1495	9	18	-41	-17	41	multi-exon	FALSE	canonical	1	284595	junction_2	143603.91562014422	NA	0	NA	TRUE	NA	NA	NA	A	coding	238	717	112	828	30.0	15	True	AATGAA	-17
PB.5879.1	chr19	-	3552	5	novel_not_in_catalog	ZNF708	novel	4004	4	NA	NA	0	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	26429.278919174092	NA	2	NA	TRUE	NA	NA	NA	C	coding	563	1692	199	1890	25.0	-1	True	AATAAA	-24
PB.5879.2	chr19	-	3425	4	novel_not_in_catalog	ZNF708	novel	4004	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	29244.59178492096	NA	3	NA	TRUE	NA	NA	NA	C	coding	494	1485	279	1763	25.0	-1	True	AATAAA	-24
PB.5879.3	chr19	-	3175	4	novel_not_in_catalog	ZNF708	novel	4004	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	29244.59178492096	NA	2	NA	TRUE	NA	NA	NA	C	coding	494	1485	279	1763	25.0	-1	True	AATAAA	-24
PB.5879.4	chr19	-	2310	5	novel_in_catalog	ZNF708	novel	4004	4	NA	NA	-18	-465	no_combination_of_known_junctions	FALSE	canonical	1	11510	junction_3	23623.34860365905	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	432	2105	70.0	-34	False	NA	NA
PB.5879.5	chr19	-	1939	3	full-splice_match	ZNF708	ENST00000601295.1	567	3	-45	-1327	1	-465	multi-exon	FALSE	canonical	1	30308	junction_2	20528.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	250	1734	70.0	-27	True	NA	NA
PB.7501.6	chr21	+	7871	5	full-splice_match	SON	ENST00000381679.8	7860	5	-6	-5	-5	5	multi-exon	FALSE	canonical	1	256083	junction_4	456205.1494560863	NA	1	NA	TRUE	NA	NA	NA	C	coding	2108	6327	35	6361	35.0	-14	True	NA	NA
PB.8165.2	chr3	+	2234	3	novel_in_catalog	GLYCTK	novel	889	5	NA	NA	7	4	intron_retention	FALSE	canonical	1	44461	junction_1	41198.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	180	543	1338	1880	15.0	-10	True	AATAAA	-23
PB.5393.5	chr18	+	3343	8	full-splice_match	NAPG	ENST00000580483.5	1516	8	133	-1960	4	0	multi-exon	FALSE	canonical	1	9019	junction_1	146099.2898539782	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	125	802	35.0	1	True	AATAAA	-15
PB.11434.1	chr9	-	2658	2	full-splice_match	CDC37L1-DT	ENST00000607997.1	463	2	34	-2229	3	10	multi-exon	FALSE	canonical	1	18586	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	20	True	NA	NA
PB.8165.4	chr3	+	3999	3	novel_in_catalog	GLYCTK	novel	889	5	NA	NA	1	1778	intron_retention	FALSE	canonical	1	44461	junction_1	41198.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	180	543	1329	1871	10.0	-1	True	CATAAA	-19
PB.5393.4	chr18	+	3600	12	novel_not_in_catalog	NAPG	novel	1516	8	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	163016.98378744783	NA	2	1	TRUE	NA	NA	NA	C	coding	229	690	370	1059	35.0	-7	True	AATAAA	-15
PB.5393.3	chr18	+	3648	12	novel_not_in_catalog	NAPG	novel	1516	8	NA	NA	44	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	125880.20984043153	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	418	1107	35.0	-26	True	AATAAA	-15
PB.5393.2	chr18	+	3503	11	novel_not_in_catalog	NAPG	novel	1516	8	NA	NA	-20	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	128502.55618329156	NA	2	1	TRUE	NA	NA	NA	C	coding	230	693	270	962	35.0	-3	True	AATAAA	-15
PB.7501.7	chr21	+	5748	3	incomplete-splice_match	SON	ENST00000381679.8	7860	5	-13	4118	0	-4118	3prime_fragment	FALSE	canonical	1	1153900	junction_2	65715.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	1902	5706	42	5747	75.0	-21	True	NA	NA
PB.10896.6	chr7	+	5083	7	novel_not_in_catalog	AC073264.3	novel	1890	2	NA	NA	17	84409	intron_retention	FALSE	non_canonical	0	0	junction_2	17138.00835375375	NA	3	NA	TRUE	NA	NA	NA	B	coding	282	849	273	1121	35.0	-5	True	NA	NA
PB.6443.20	chr2	-	4456	39	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	0	-218	any annotated donor/acceptor	FALSE	canonical	1	9130	junction_4	353055.87798065296	NA	0	NA	TRUE	NA	NA	NA	C	coding	1303	3912	43	3954	25.0	-1	True	AATAAA	-19
PB.11077.3	chr8	-	1611	8	novel_not_in_catalog	PPP2CB	novel	448	4	NA	NA	43	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	385829.1263501532	NA	1	NA	TRUE	NA	NA	NA	B	coding	309	930	72	1001	55.0	43	False	AATAAA	-12
PB.1059.5	chr1	-	3116	12	novel_in_catalog	DSTYK	novel	7739	12	NA	NA	-22	-4391	no_combination_of_known_junctions	FALSE	canonical	1	6332	junction_11	34374.53778165576	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	550	2454	85.0	113	False	NA	NA
PB.4386.1	chr16	+	5900	19	novel_not_in_catalog	SETD1A	novel	6451	19	NA	NA	-295	-4	any annotated donor/acceptor	TRUE	canonical	1	30832	junction_1	94410.27811855465	NA	2	NA	TRUE	NA	NA	NA	A	coding	1707	5124	140	5263	25.0	0	True	ATTAAA	-12
PB.5684.2	chr19	-	3638	8	novel_not_in_catalog	ZNF426	novel	7085	8	NA	NA	2	0	intron_retention	TRUE	non_canonical	0	0	junction_1	43431.25438705004	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	510	2174	15.0	-5	True	NA	NA
PB.8511.9	chr3	+	3322	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	32	3214	-4	1328	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	27	1226	40.0	-14	True	ATTAAA	-22
PB.5684.1	chr19	-	3815	8	novel_not_in_catalog	ZNF426	novel	7085	8	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	43431.25438705004	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	476	2140	15.0	3	True	NA	NA
PB.5684.6	chr19	-	2410	9	novel_not_in_catalog	ZNF426	novel	7085	8	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	954	junction_5	51499.516808412875	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	583	2037	95.0	-4	True	NA	NA
PB.5684.7	chr19	-	2205	7	novel_in_catalog	ZNF426	novel	7085	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	8508	junction_1	44415.36835657225	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	894	1832	95.0	-1	True	NA	NA
PB.5684.4	chr19	-	2314	8	full-splice_match	ZNF426	ENST00000253115.6	7085	8	-12	4783	6	0	multi-exon	FALSE	canonical	1	31065	junction_7	34266.093398815196	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	277	1941	95.0	-1	True	NA	NA
PB.5684.5	chr19	-	2427	6	full-splice_match	ZNF426	ENST00000593003.5	2402	6	-25	0	12	0	multi-exon	FALSE	canonical	1	11060	junction_4	47158.35495604146	NA	31	4	TRUE	NA	NA	NA	C	coding	516	1551	504	2054	95.0	-3	True	NA	NA
PB.734.1	chr1	-	2328	10	novel_in_catalog	MINDY1	novel	2637	11	NA	NA	168	-1	no_combination_of_known_junctions	FALSE	canonical	1	72204	junction_9	55107.49211616632	NA	0	NA	TRUE	NA	NA	NA	A	coding	469	1410	468	1877	20.0	1703	False	AATAAA	-15
PB.12248.20	chrX	-	3276	21	full-splice_match	CUL4B	ENST00000336592.10	3109	21	-73	-94	-73	94	multi-exon	FALSE	non_canonical	0	0	junction_17	157405.57900909198	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	115	2817	10.0	112	False	AATAGA	-14
PB.12248.23	chrX	-	2887	21	full-splice_match	CUL4B	ENST00000336592.10	3109	21	-78	300	-78	-55	multi-exon	FALSE	non_canonical	0	0	junction_17	157405.57900909198	NA	1	NA	TRUE	NA	NA	NA	C	coding	900	2703	120	2822	25.0	107	False	GATAAA	-16
PB.1689.1	chr10	+	3523	15	novel_in_catalog	TACC2	novel	9673	23	NA	NA	-53	0	intron_retention	FALSE	canonical	1	17232	junction_1	94727.9729799105	NA	0	NA	TRUE	NA	NA	NA	A	coding	575	1728	1312	3039	30.0	-43	True	AATAAA	-41
PB.5945.12	chr19	+	2328	4	full-splice_match	ZNF146	ENST00000443387.2	3326	4	-26	1024	1	-1021	multi-exon	FALSE	canonical	1	290973	junction_1	181112.22459446397	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1019	1897	50.0	1	True	NA	NA
PB.5945.13	chr19	+	2783	3	full-splice_match	ZNF146	ENST00000456324.5	3780	3	506	491	2	-491	multi-exon	FALSE	canonical	1	134215	junction_1	280516.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	944	1822	30.0	2	True	NA	NA
PB.5945.10	chr19	+	3349	4	full-splice_match	ZNF146	ENST00000443387.2	3326	4	-26	3	1	0	multi-exon	FALSE	canonical	1	290973	junction_1	181112.22459446397	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1019	1897	30.0	1	True	ATTAAA	-23
PB.5945.11	chr19	+	2602	5	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	1	-867	any annotated donor/acceptor	FALSE	canonical	1	21296	junction_2	270121.378473641	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	1139	2017	60.0	1	True	AATAGA	-32
PB.5945.16	chr19	+	3362	4	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	4842	junction_1	315582.3451698287	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1039	1917	40.0	0	True	ATTAAA	-16
PB.5945.17	chr19	+	2932	5	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	26	-485	any annotated donor/acceptor	FALSE	canonical	1	21296	junction_2	270121.378473641	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	1087	1965	30.0	0	True	NA	NA
PB.5945.14	chr19	+	3508	5	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	5	-5	any annotated donor/acceptor	FALSE	canonical	1	6255	junction_3	279103.1600851198	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1183	2061	35.0	5	True	ATTAAA	-18
PB.5945.15	chr19	+	2843	4	full-splice_match	ZNF146	ENST00000443387.2	3326	4	-9	492	-9	-489	multi-exon	FALSE	canonical	1	290973	junction_1	181112.22459446397	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	1002	1880	30.0	-9	True	NA	NA
PB.6774.1	chr2	+	4074	5	full-splice_match	LYPD6	ENST00000334166.8	4071	5	-15	12	-15	-12	multi-exon	FALSE	canonical	1	22688	junction_1	12850.507059548272	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	273	788	40.0	-68	True	AATGAA	-42
PB.7501.5	chr21	+	7487	7	full-splice_match	SON	ENST00000300278.8	7477	7	-12	2	0	-2	multi-exon	FALSE	canonical	1	140755	junction_6	433197.2270969336	NA	1	NA	TRUE	NA	NA	NA	C	coding	2303	6912	42	6953	35.0	-21	True	AATAAA	-17
PB.11399.2	chr8	+	2022	5	full-splice_match	SLC52A2	ENST00000527078.5	1790	5	16	-248	0	-1	multi-exon	FALSE	canonical	1	54754	junction_1	220164.6359437637	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	431	1768	30.0	-32	True	AATAAA	-12
PB.11399.1	chr8	+	1780	5	full-splice_match	SLC52A2	ENST00000402965.5	1777	5	-4	1	0	-1	multi-exon	FALSE	canonical	1	200	junction_1	243167.46482516942	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	189	1526	30.0	-36	True	AATAAA	-12
PB.8870.2	chr4	+	5272	8	novel_in_catalog	NUDT9	novel	1701	8	NA	NA	5	-1	intron_retention	FALSE	canonical	1	18886	junction_4	162640.2699324933	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	4458	4949	20.0	5	True	AATAAA	-21
PB.6560.13	chr2	-	4028	7	novel_not_in_catalog	MOB1A	novel	4885	6	NA	NA	-1	-1006	any annotated donor/acceptor	FALSE	canonical	1	18379	junction_2	535895.3523309274	NA	4	NA	TRUE	NA	NA	NA	C	coding	232	699	226	924	25.0	-21	True	AATAAA	-21
PB.888.7	chr1	+	3674	18	full-splice_match	DDR2	ENST00000367921.7	3096	18	-38	-540	-33	540	multi-exon	FALSE	canonical	1	71871	junction_1	37348.640679256794	NA	6	1	TRUE	NA	NA	NA	C	coding	855	2568	392	2959	55.0	-14	True	NA	NA
PB.11184.3	chr8	-	1629	6	incomplete-splice_match	RPL7	ENST00000352983.6	1101	7	264	9	-1	-9	intron_retention	FALSE	canonical	1	3198	junction_2	9918.093566810105	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	944	1570	35.0	-3	True	AATAAA	-17
PB.8870.4	chr4	+	2488	8	full-splice_match	NUDT9	ENST00000473942.5	2458	8	8	-38	8	38	multi-exon	FALSE	canonical	1	19023	junction_1	154599.24012631061	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	115	1017	75.0	8	True	NA	NA
PB.11184.1	chr8	-	832	7	full-splice_match	RPL7	ENST00000352983.6	1101	7	264	5	-1	-5	multi-exon	FALSE	canonical	1	3198	junction_2	50176.61399718221	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	23	769	30.0	-3	True	AATAAA	-21
PB.8870.5	chr4	+	1633	8	novel_not_in_catalog	NUDT9	novel	1701	8	NA	NA	32	0	any annotated donor/acceptor	FALSE	canonical	1	3188	junction_2	166261.61544360855	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	278	1309	20.0	32	True	AATAAA	-22
PB.2235.3	chr11	-	5284	1	incomplete-splice_match	SESN3	ENST00000536441.6	9558	10	60372	29	60221	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	2356	False	AATAAA	-20
PB.2235.2	chr11	-	9533	10	full-splice_match	SESN3	ENST00000536441.6	9558	10	-4	29	-4	-29	multi-exon	FALSE	canonical	1	139069	junction_9	166580.1585671202	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	342	1820	20.0	0	True	AATAAA	-20
PB.9269.17	chr5	+	2947	18	full-splice_match	RAD17	ENST00000354312.7	2943	18	-6	2	1	0	multi-exon	FALSE	canonical	1	33272	junction_10	55202.20021823637	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	428	2440	10.0	1	True	ATTAAA	-12
PB.9269.16	chr5	+	2812	17	full-splice_match	RAD17	ENST00000345306.10	2789	17	-24	1	0	1	multi-exon	FALSE	canonical	1	1622	junction_1	61407.25705789992	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	292	2304	5.0	0	True	ATTAAA	-13
PB.9269.11	chr5	+	2992	18	novel_not_in_catalog	RAD17	novel	464	5	NA	NA	-5	0	intron_retention	FALSE	canonical	1	13	junction_1	59771.75388826141	NA	2	1	TRUE	NA	NA	NA	C	coding	670	2013	473	2485	10.0	-17	True	ATTAAA	-12
PB.2235.6	chr11	-	2039	11	novel_not_in_catalog	SESN3	novel	9558	10	NA	NA	-3	195	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	177998.34723727073	NA	2	1	TRUE	NA	NA	NA	C	coding	492	1479	259	1737	5.0	1	True	CATAAA	-32
PB.2235.5	chr11	-	2129	10	full-splice_match	SESN3	ENST00000536441.6	9558	10	-5	7434	-5	201	multi-exon	FALSE	canonical	1	139069	junction_9	166580.1585671202	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	343	1821	5.0	-1	True	CATAAA	-38
PB.2235.4	chr11	-	3743	10	full-splice_match	SESN3	ENST00000536441.6	9558	10	-4	5819	-4	1816	multi-exon	FALSE	canonical	1	139069	junction_9	166580.1585671202	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	342	1820	25.0	0	True	TTTAAA	-32
PB.2548.1	chr12	-	2221	1	full-splice_match	AC079630.1	ENST00000618127.1	1840	1	-377	-4	-377	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	157	474	321	794	30.0	390	False	AATAAA	-19
PB.10928.1	chr7	+	2392	5	full-splice_match	AOC1	ENST00000360937.8	2649	5	42	215	0	0	multi-exon	FALSE	canonical	1	49471	junction_1	30246.068186625514	NA	1	NA	TRUE	NA	NA	NA	A	coding	751	2256	57	2312	0.0	1	True	AATAAA	-14
PB.9269.19	chr5	+	3808	17	novel_in_catalog	RAD17	novel	464	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	33272	junction_9	56900.291372139516	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	1289	3301	10.0	2	True	ATTAAA	-12
PB.9269.18	chr5	+	3794	17	full-splice_match	RAD17	ENST00000305138.8	3164	17	-632	2	13	0	multi-exon	FALSE	canonical	1	33272	junction_9	52506.46692101216	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	1275	3287	10.0	-3645	False	ATTAAA	-12
PB.8750.3	chr4	+	2797	3	full-splice_match	RHOH	ENST00000381799.9	4305	3	79	1429	-3	774	multi-exon	FALSE	canonical	1	167325	junction_1	95254.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	646	1221	90.0	1	True	NA	NA
PB.8750.1	chr4	+	1722	3	full-splice_match	RHOH	ENST00000613272.4	1865	3	-31	174	-31	-174	multi-exon	FALSE	canonical	1	20246	junction_1	168794.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	519	1094	35.0	-8276	False	TATAAA	-23
PB.8750.7	chr4	+	1616	3	full-splice_match	RHOH	ENST00000381799.9	4305	3	124	2565	-2	-362	multi-exon	FALSE	canonical	1	167325	junction_1	95254.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	601	1176	20.0	0	True	CATAAA	-27
PB.8750.6	chr4	+	2128	3	full-splice_match	RHOH	ENST00000381799.9	4305	3	123	2054	-3	149	multi-exon	FALSE	canonical	1	167325	junction_1	95254.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	602	1177	30.0	-1	True	TATAAA	-13
PB.8750.5	chr4	+	1887	3	full-splice_match	RHOH	ENST00000381799.9	4305	3	112	2306	-14	-103	multi-exon	FALSE	canonical	1	167325	junction_1	95254.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	613	1188	25.0	-8724	False	GATAAA	-20
PB.8750.4	chr4	+	4378	1	novel_in_catalog	RHOH	novel	1225	3	NA	NA	0	-8303	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	4	True	NA	NA
PB.8750.9	chr4	+	1419	3	full-splice_match	RHOH	ENST00000381799.9	4305	3	152	2734	1	238	multi-exon	FALSE	canonical	1	167325	junction_1	95254.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	573	1148	35.0	-8684	False	ATTAAA	-20
PB.8750.8	chr4	+	2071	1	novel_in_catalog	RHOH	novel	1225	3	NA	NA	0	-10565	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	3	True	NA	NA
PB.4181.3	chr16	+	2049	15	novel_in_catalog	PDPK1	novel	7241	14	NA	NA	7	-13	combination_of_known_junctions	FALSE	canonical	1	72	junction_2	113952.8018789412	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	320	1909	85.0	7	True	NA	NA
PB.4181.2	chr16	+	1904	14	full-splice_match	PDPK1	ENST00000342085.8	7241	14	56	5281	0	-13	multi-exon	FALSE	canonical	1	488	junction_6	113120.00839873633	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	94	1764	85.0	-1	True	NA	NA
PB.4181.1	chr16	+	2231	16	novel_not_in_catalog	PDPK1	novel	7241	14	NA	NA	6	-13	any annotated donor/acceptor	TRUE	canonical	1	17	junction_2	111928.50378868349	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	502	2091	85.0	-3	True	NA	NA
PB.886.11	chr1	+	2928	8	full-splice_match	UHMK1	ENST00000489294.1	8478	8	-6	5556	-6	0	multi-exon	FALSE	canonical	1	279935	junction_1	89999.36959371051	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	165	1424	70.0	-9	True	TATAAA	-35
PB.5114.2	chr17	-	2324	6	novel_not_in_catalog	ANKRD40	novel	4184	5	NA	NA	5	-1668	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	176320.21051983803	NA	0	NA	TRUE	NA	NA	NA	A	coding	368	1107	79	1185	35.0	-29	True	AATAAA	-16
PB.5401.11	chr18	-	3132	17	novel_not_in_catalog	AFG3L2	novel	3247	17	NA	NA	44	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	169322.5349425155	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	189	1643	35.0	19	False	AATAAA	-14
PB.7036.10	chr2	-	2446	1	novel_in_catalog	FARSB	novel	3369	17	NA	NA	245	-83111	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.11358.10	chr8	+	4719	22	incomplete-splice_match	DENND3	ENST00000519811.5	5482	23	5	2127	5	611	3prime_fragment	FALSE	canonical	1	95951	junction_4	56444.42448668117	NA	2	NA	TRUE	NA	NA	NA	C	coding	1296	3891	66	3956	35.0	16	True	NA	NA
PB.5401.13	chr18	-	2745	16	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	-114	-166	no_combination_of_known_junctions	FALSE	canonical	1	7586	junction_8	177869.13510018788	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	35	2290	35.0	-14	True	ATTAAA	-24
PB.11358.12	chr8	+	2357	4	full-splice_match	DENND3	ENST00000518347.5	850	4	42	-1549	5	-4	multi-exon	FALSE	canonical	1	100934	junction_2	2369.296520066663	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	55	681	30.0	27	True	ATTAAA	-21
PB.11358.13	chr8	+	5388	23	novel_not_in_catalog	DENND3	novel	560	4	NA	NA	115	0	any annotated donor/acceptor	FALSE	canonical	1	121	junction_1	68056.00572098112	NA	0	NA	TRUE	NA	NA	NA	C	coding	1211	3636	190	3825	35.0	190	False	AATAAA	-9
PB.8518.1	chr3	+	2264	1	antisense	novelGene_PLD1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.5401.12	chr18	-	2875	17	full-splice_match	AFG3L2	ENST00000269143.7	3247	17	196	176	-116	-176	multi-exon	FALSE	canonical	1	167367	junction_14	155455.40699420645	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	37	2430	40.0	-16	True	ATTAAA	-14
PB.908.9	chr1	+	2628	7	full-splice_match	RCSD1	ENST00000367854.7	3135	7	168	339	0	-338	multi-exon	FALSE	canonical	1	233895	junction_2	40720.991979635706	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	164	1414	10.0	0	True	AATACA	-14
PB.908.8	chr1	+	2042	7	full-splice_match	RCSD1	ENST00000367854.7	3135	7	158	935	2	-934	multi-exon	FALSE	canonical	1	233895	junction_2	40720.991979635706	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	174	1424	50.0	-10	True	TTTAAA	-18
PB.635.57	chr1	-	4567	17	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-24	intron_retention	FALSE	canonical	1	1441617	junction_1	1219705.2544559112	NA	3	NA	TRUE	NA	NA	NA	C	coding	669	2010	447	2456	40.0	-1	True	AATAAA	-21
PB.5489.5	chr18	-	1698	10	incomplete-splice_match	TCF4	ENST00000457482.7	2372	13	408	4373	-4	2550	3prime_fragment	FALSE	canonical	1	160865	junction_9	62574.23476830944	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	104	1249	30.0	26	True	NA	NA
PB.908.5	chr1	+	5432	7	full-splice_match	RCSD1	ENST00000367854.7	3135	7	145	-2442	-11	2442	multi-exon	FALSE	canonical	1	233895	junction_2	40720.991979635706	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	187	1437	35.0	6	True	NA	NA
PB.908.4	chr1	+	2902	7	novel_not_in_catalog	RCSD1	novel	3044	6	NA	NA	-18	-8	any annotated donor/acceptor	FALSE	canonical	1	6181	junction_6	108942.26694816643	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	194	1489	20.0	-1	True	GATAAA	-17
PB.908.3	chr1	+	2902	6	full-splice_match	RCSD1	ENST00000537350.5	3044	6	137	5	-19	-5	multi-exon	FALSE	canonical	1	22130	junction_2	121404.19382047723	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	195	1355	20.0	-2	True	GATAAA	-20
PB.908.2	chr1	+	4071	7	full-splice_match	RCSD1	ENST00000367854.7	3135	7	136	-1072	-20	1072	multi-exon	FALSE	canonical	1	233895	junction_2	40720.991979635706	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	196	1446	30.0	-3	True	AATAAA	-34
PB.908.1	chr1	+	2899	7	full-splice_match	RCSD1	ENST00000367854.7	3135	7	227	9	54	-8	multi-exon	FALSE	canonical	1	233895	junction_2	40720.991979635706	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	105	1355	20.0	19	True	GATAAA	-17
PB.5401.14	chr18	-	2913	16	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	84	-172	no_combination_of_known_junctions	FALSE	canonical	1	5193	junction_14	176553.79534325132	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	149	2464	35.0	-22	True	ATTAAA	-18
PB.3112.18	chr13	-	2883	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	74650	junction_21	148453.39459854594	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	222	2528	25.0	1	True	AATACA	-20
PB.3112.19	chr13	-	2857	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	13384	junction_24	131895.3486250176	NA	6	1	TRUE	NA	NA	NA	C	coding	732	2199	267	2465	25.0	35	True	AATACA	-20
PB.9585.6	chr5	+	2576	7	novel_in_catalog	CNOT8	novel	485	3	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	10330	junction_1	232469.5124501395	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	346	1224	20.0	12	True	AATAAA	-22
PB.9585.7	chr5	+	2284	6	full-splice_match	CNOT8	ENST00000520671.5	923	6	-28	-1333	-26	-1	multi-exon	FALSE	canonical	1	16506	junction_1	252045.54192447045	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	372	932	20.0	-28	True	AATAAA	-22
PB.6921.28	chr2	-	5972	26	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	-1	278	intron_retention	FALSE	canonical	1	35517	junction_22	795899.6753919639	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	2100	4754	10.0	10	True	AATAAA	-19
PB.5401.17	chr18	-	2362	17	full-splice_match	AFG3L2	ENST00000269143.7	3247	17	64	821	64	-821	multi-exon	FALSE	canonical	1	167367	junction_14	155455.40699420645	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2193	169	2361	60.0	39	False	AATGAA	-37
PB.9585.2	chr5	+	2767	8	novel_in_catalog	CNOT8	novel	485	3	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	37152	junction_1	263931.28110056935	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	538	1416	20.0	0	True	AATAAA	-21
PB.9585.3	chr5	+	2399	6	full-splice_match	CNOT8	ENST00000519404.5	945	6	-141	-1313	-4	-1	multi-exon	FALSE	canonical	1	35750	junction_3	272846.5604272115	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	331	1047	20.0	-6	True	AATAAA	-22
PB.3112.10	chr13	-	2902	26	full-splice_match	SUPT20H	ENST00000350612.10	2739	26	15	-178	15	0	multi-exon	FALSE	canonical	1	135145	junction_2	128263.45782423925	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	207	2546	25.0	16	True	AATACA	-21
PB.3112.11	chr13	-	2857	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-9	0	intron_retention	FALSE	canonical	1	59174	junction_4	148342.64440692164	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	195	2501	25.0	28	True	AATACA	-21
PB.3112.12	chr13	-	2789	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-12	0	intron_retention	FALSE	canonical	1	155906	junction_6	116660.84159022654	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	198	2396	25.0	25	True	AATACA	-21
PB.3112.13	chr13	-	2777	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	75878	junction_22	130484.73952468233	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	222	2384	25.0	1	True	AATACA	-21
PB.3112.14	chr13	-	2777	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	59174	junction_3	132200.83428852327	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	222	2384	25.0	1	True	AATACA	-21
PB.3112.15	chr13	-	3740	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	75878	junction_22	135480.38507333136	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	222	1790	25.0	1	True	AATACA	-20
PB.3112.16	chr13	-	3136	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	66551	junction_7	142942.5617533644	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	202	2781	25.0	21	True	AATACA	-20
PB.3112.17	chr13	-	3013	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	66551	junction_6	137831.3661930777	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	222	2621	25.0	1	True	AATACA	-20
PB.3667.16	chr14	+	3896	14	full-splice_match	PPP2R5C	ENST00000334743.9	4328	14	-26	458	0	0	multi-exon	FALSE	canonical	1	460	junction_5	229653.88388227404	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	105	1649	20.0	3	True	AATAAA	-22
PB.4493.1	chr16	-	2062	3	full-splice_match	GFOD2	ENST00000268797.11	2126	3	63	1	-19	0	multi-exon	FALSE	canonical	1	145707	junction_1	8704.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	385	1158	284	1441	15.0	-43	True	AATAAA	-17
PB.11588.8	chr9	+	2433	12	novel_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-356	-44091	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8621.007823962722	NA	0	NA	TRUE	NA	NA	NA	B	coding	398	1197	356	1552	40.0	NA	False	ATTAAA	-14
PB.2221.1	chr11	+	7926	29	novel_in_catalog	CEP295	novel	8057	30	NA	NA	-33	-7	combination_of_known_junctions	TRUE	canonical	1	54557	junction_6	33331.76298431958	NA	1	NA	TRUE	NA	NA	NA	B	coding	2631	7893	34	7926	75.0	-95	False	TATAAA	-36
PB.2221.2	chr11	+	1798	13	incomplete-splice_match	CEP295	ENST00000325212.10	8057	30	0	34759	0	-21	3prime_fragment	FALSE	canonical	1	54557	junction_6	19953.25556909337	NA	0	NA	TRUE	NA	NA	NA	B	coding	599	1797	1	1797	85.0	-62	False	NA	NA
PB.2221.3	chr11	+	6841	24	novel_in_catalog	CEP295	novel	8057	30	NA	NA	18	19	combination_of_known_junctions	FALSE	canonical	1	54557	junction_6	18170.23636483233	NA	0	NA	TRUE	NA	NA	NA	B	coding	2232	6696	145	6840	65.0	-44	True	NA	NA
PB.9153.1	chr5	-	3150	12	full-splice_match	ANKH	ENST00000284268.7	8214	12	45	5019	-14	1269	multi-exon	FALSE	canonical	1	403506	junction_11	85305.66218163911	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	294	1772	20.0	0	True	AATAAA	-14
PB.372.1	chr1	+	2434	8	novel_in_catalog	TOE1	novel	2389	8	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	1	51260	junction_6	62308.671888347904	NA	2	NA	TRUE	NA	NA	NA	C	coding	256	771	532	1302	40.0	0	True	NA	NA
PB.5512.1	chr18	+	1899	8	full-splice_match	SERPINB2	ENST00000299502.8	1913	8	5	9	0	2	multi-exon	FALSE	canonical	1	434552	junction_1	160200.61022508558	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	76	1323	35.0	0	True	AATAAA	-16
PB.12126.2	chrX	+	2461	21	incomplete-splice_match	KIF4A	ENST00000374403.3	4348	31	-36	25051	-36	-25051	3prime_fragment	FALSE	canonical	1	6106	junction_7	52160.03298165656	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2343	119	2461	60.0	14	True	NA	NA
PB.12126.3	chrX	+	4349	31	full-splice_match	KIF4A	ENST00000374403.3	4348	31	-3	2	-3	-2	multi-exon	FALSE	canonical	1	6106	junction_7	50811.90962817893	NA	0	NA	TRUE	NA	NA	NA	C	coding	1232	3699	86	3784	15.0	-17	True	AATAAA	-19
PB.12126.1	chrX	+	4301	30	novel_in_catalog	KIF4A	novel	4348	31	NA	NA	-52	-3	no_combination_of_known_junctions	FALSE	canonical	1	6106	junction_7	53235.19579113364	NA	0	NA	TRUE	NA	NA	NA	C	coding	1200	3603	135	3737	15.0	-2	True	AATAAA	-18
PB.12126.6	chrX	+	4643	30	novel_in_catalog	KIF4A	novel	4348	31	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	6106	junction_6	50869.50034935574	NA	1	NA	TRUE	NA	NA	NA	C	coding	1232	3699	379	4077	15.0	-23	True	AATAAA	-20
PB.12126.7	chrX	+	4521	31	novel_in_catalog	KIF4A	novel	4348	31	NA	NA	5	-7	combination_of_known_junctions	FALSE	canonical	1	3980	junction_1	52037.07390808553	NA	1	NA	TRUE	NA	NA	NA	C	coding	1232	3699	263	3961	20.0	-9	True	AATAAA	-14
PB.12126.4	chrX	+	2123	18	incomplete-splice_match	KIF4A	ENST00000374403.3	4348	31	-17	44632	-17	-44632	3prime_fragment	FALSE	canonical	1	6106	junction_7	52786.63400132946	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2022	100	2121	55.0	-31	False	AATACA	-4
PB.12126.5	chrX	+	4445	32	novel_not_in_catalog	KIF4A	novel	4348	31	NA	NA	-16	-3	any annotated donor/acceptor	FALSE	canonical	1	146	junction_11	52946.12101041914	NA	2	NA	TRUE	NA	NA	NA	C	coding	1260	3783	99	3881	15.0	-30	False	AATAAA	-18
PB.8598.9	chr3	+	4665	11	full-splice_match	IL1RAP	ENST00000072516.7	4697	11	25	7	-11	0	multi-exon	FALSE	canonical	1	58989	junction_1	35513.3139316792	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	146	1858	20.0	-14	True	AATAAA	-20
PB.9873.2	chr6	+	6928	31	full-splice_match	PRRC2A	ENST00000376033.2	6893	31	-45	10	-40	-10	multi-exon	FALSE	canonical	1	244180	junction_1	479085.8468952778	NA	1	NA	TRUE	NA	NA	NA	C	coding	2157	6474	280	6753	65.0	0	True	AATAAA	-9
PB.12217.1	chrX	+	2593	4	full-splice_match	NXT2	ENST00000372106.5	2562	4	-25	-6	-25	6	multi-exon	FALSE	canonical	1	83731	junction_1	35246.63502615061	NA	120	3	TRUE	NA	NA	NA	C	coding	142	429	157	585	25.0	7	True	AATAAA	-26
PB.11593.2	chr9	+	2816	5	full-splice_match	FXN	ENST00000484259.2	6961	5	-34	4179	-12	16	multi-exon	FALSE	canonical	1	113796	junction_2	68297.35642166174	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	49	681	10.0	-34	True	AATAAA	-20
PB.12217.3	chrX	+	2478	4	novel_not_in_catalog	NXT2	novel	2692	5	NA	NA	240	6	any annotated donor/acceptor	FALSE	canonical	1	3746	junction_1	71791.3685124395	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	45	470	25.0	-187	False	AATAAA	-26
PB.12217.2	chrX	+	2500	4	full-splice_match	NXT2	ENST00000372103.1	1085	4	75	-1490	75	6	multi-exon	FALSE	canonical	1	61876	junction_1	45042.51825405266	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	148	492	25.0	-12	True	AATAAA	-26
PB.8522.2	chr3	-	1686	5	full-splice_match	TNFSF10	ENST00000241261.6	1953	5	29	238	-3	-84	multi-exon	FALSE	canonical	1	474886	junction_2	10654.084249127187	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	95	940	100.0	-12	True	NA	NA
PB.3608.1	chr14	-	3918	1	novel_in_catalog	FOXN3	novel	513	3	NA	NA	20641	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	1649	False	AATAAA	-22
PB.3608.2	chr14	-	3496	1	novel_in_catalog	FOXN3	novel	513	3	NA	NA	21062	-15	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	2070	False	AATAAA	-21
PB.3608.3	chr14	-	2913	1	novel_in_catalog	FOXN3	novel	513	3	NA	NA	21183	-477	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	2191	False	NA	NA
PB.11136.5	chr8	-	2364	6	full-splice_match	TMEM68	ENST00000334667.6	2401	6	29	8	0	0	multi-exon	FALSE	canonical	1	4267	junction_1	65499.747158595965	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	225	998	45.0	-1	True	ATTAAA	-8
PB.11456.9	chr9	+	2085	5	full-splice_match	TYRP1	ENST00000381136.2	872	5	-10	-1203	-10	148	multi-exon	FALSE	canonical	1	8554	junction_1	202231.99954816746	NA	3	NA	TRUE	NA	NA	NA	C	coding	247	744	86	829	40.0	0	True	AATAAA	-23
PB.8178.10	chr3	-	1830	13	novel_not_in_catalog	AC096887.1	novel	823	6	NA	NA	-31002	-45201	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	72223.05741181082	NA	0	NA	TRUE	NA	NA	NA	B	coding	491	1476	56	1531	35.0	-21	True	TTTAAA	-18
PB.4388.1	chr16	-	4267	4	incomplete-splice_match	STX1B	ENST00000565419.2	834	9	13376	-3826	24	0	5prime_fragment	FALSE	canonical	1	139946	junction_1	10321.205818873857	NA	5	NA	TRUE	NA	NA	NA	A	coding	111	336	106	441	5.0	522	False	NA	NA
PB.3694.1	chr14	+	3438	3	full-splice_match	SIVA1	ENST00000535554.4	1244	3	-15	-2179	-15	1	multi-exon	FALSE	canonical	1	1038979	junction_1	339776.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	71	544	20.0	-15	True	AATAAA	-21
PB.12374.1	chrY	-	2057	13	full-splice_match	ASMTL	ENST00000381317.8_PAR_Y	2027	13	-30	0	26	0	multi-exon	TRUE	canonical	1	89	junction_7	101.53734945000944	NA	0	NA	TRUE	NA	NA	NA	A	coding	621	1866	64	1929	10.0	NA	False	AATAAA	-14
PB.3789.1	chr15	+	3434	11	full-splice_match	DLL4	ENST00000650082.1	3433	11	3	-4	3	4	multi-exon	FALSE	canonical	1	22145	junction_1	10855.960947332116	NA	0	NA	TRUE	NA	NA	NA	A	coding	685	2058	334	2391	15.0	-9616	False	NA	NA
PB.1011.21	chr1	-	1875	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	133	-193	-2	193	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	104	1090	20.0	-25	True	TATAAA	-22
PB.11853.3	chr9	+	3114	19	full-splice_match	FUBP3	ENST00000319725.9	3124	19	10	0	10	0	multi-exon	FALSE	canonical	1	263505	junction_16	137564.85922855078	NA	3	1	TRUE	NA	NA	NA	C	coding	572	1719	66	1784	0.0	33	True	AATAAA	-31
PB.6878.7	chr2	-	2473	20	novel_not_in_catalog	CWC22	novel	3280	20	NA	NA	20	-23	intron_retention	FALSE	canonical	1	11	junction_19	88925.82859023487	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1197	1276	2472	65.0	12	True	AGTAAA	-29
PB.6881.1	chr2	-	2704	12	novel_not_in_catalog	CERKL	novel	3208	13	NA	NA	63035	0	any annotated donor/acceptor	FALSE	canonical	1	393	junction_11	4424.703689943729	NA	2	NA	TRUE	NA	NA	NA	B	coding	327	984	213	1196	25.0	-19	False	TATAAA	-19
PB.6881.2	chr2	-	2910	12	novel_not_in_catalog	CERKL	novel	3208	13	NA	NA	16922	-1	any annotated donor/acceptor	FALSE	canonical	1	497	junction_11	4774.233940540436	NA	0	NA	TRUE	NA	NA	NA	B	coding	280	843	561	1403	20.0	3600	False	TATAAA	-18
PB.10108.1	chr6	+	3287	3	novel_not_in_catalog	AL096678.1	novel	472	2	NA	NA	-34934	22889	intron_retention	FALSE	canonical	1	528	junction_2	377.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-20
PB.11853.1	chr9	+	3040	18	novel_in_catalog	FUBP3	novel	2228	2	NA	NA	-22	0	no_combination_of_known_junctions	TRUE	canonical	1	7331	junction_1	182109.50408096748	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	253	1710	0.0	1	True	AATAAA	-31
PB.10011.1	chr6	-	1690	4	novel_not_in_catalog	AL109615.3	novel	2232	5	NA	NA	968	652	any annotated donor/acceptor	FALSE	canonical	1	1398	junction_1	2961.3911520695056	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	53	False	NA	NA
PB.6990.79	chr2	-	7315	44	full-splice_match	FN1	ENST00000357867.8	7898	44	171	412	170	0	multi-exon	FALSE	canonical	1	1194474	junction_7	2630488.1727053467	NA	0	NA	TRUE	NA	NA	NA	C	coding	2176	6531	96	6626	35.0	532	False	AATAAA	-14
PB.9590.8	chr5	+	3772	31	full-splice_match	CYFIP2	ENST00000620254.4	4124	31	29	323	-13	-306	multi-exon	FALSE	canonical	1	396	junction_4	178351.58177699335	NA	0	NA	TRUE	NA	NA	NA	C	coding	1221	3663	110	3772	45.0	-13	True	NA	NA
PB.9590.9	chr5	+	4143	32	novel_not_in_catalog	CYFIP2	novel	4210	32	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	396	junction_4	211876.8788599991	NA	2	1	TRUE	NA	NA	NA	C	coding	970	2913	107	3019	90.0	-10	True	CATAAA	-3
PB.9590.7	chr5	+	6467	31	full-splice_match	CYFIP2	ENST00000620254.4	4124	31	28	-2371	-14	0	multi-exon	FALSE	canonical	1	396	junction_4	178351.58177699335	NA	32	3	TRUE	NA	NA	NA	C	coding	1253	3762	111	3872	15.0	-14	True	ATTAAA	-26
PB.9590.4	chr5	+	4013	30	full-splice_match	CYFIP2	ENST00000521420.5	6370	30	-31	2388	16	0	multi-exon	FALSE	canonical	1	3801	junction_3	180382.62969211992	NA	0	NA	TRUE	NA	NA	NA	C	coding	1227	3684	123	3806	90.0	-26	True	CATAAA	-3
PB.9590.5	chr5	+	1770	8	novel_not_in_catalog	CYFIP2	novel	4210	32	NA	NA	16	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	239855.0203320535	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	123	860	15.0	-26	True	AATAAA	-24
PB.9590.2	chr5	+	3952	30	novel_in_catalog	CYFIP2	novel	4210	32	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	396	junction_4	204965.26463751434	NA	4	NA	TRUE	NA	NA	NA	C	coding	1150	3453	132	3584	90.0	-35	True	CATAAA	-3
PB.9590.3	chr5	+	3921	29	novel_in_catalog	CYFIP2	novel	4210	32	NA	NA	7	-5	no_combination_of_known_junctions	FALSE	canonical	1	396	junction_4	205682.25719896943	NA	2	NA	TRUE	NA	NA	NA	C	coding	1195	3588	132	3719	90.0	-35	True	NA	NA
PB.6990.73	chr2	-	7695	46	novel_not_in_catalog	FN1	novel	8103	45	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	1	4500	junction_45	2665142.700783044	NA	1	NA	TRUE	NA	NA	NA	C	coding	2237	6714	291	7004	30.0	1	True	AATAAA	-16
PB.9590.1	chr5	+	4159	32	novel_in_catalog	CYFIP2	novel	4210	32	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	396	junction_5	222716.90118349897	NA	6	1	TRUE	NA	NA	NA	C	coding	1182	3549	404	3952	90.0	-4193	False	CATAAA	-3
PB.12154.9	chrX	-	3482	9	novel_in_catalog	ATRX	novel	11167	35	NA	NA	1	176	intron_retention	FALSE	canonical	1	23378	junction_8	91805.8225372988	NA	1	NA	TRUE	NA	NA	NA	C	coding	1003	3009	473	3481	80.0	-4	True	CATAAA	-30
PB.12154.8	chrX	-	3344	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-2	177251	-2	176	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3126	218	3343	80.0	-3	True	CATAAA	-30
PB.413.4	chr1	+	3502	14	full-splice_match	ZYG11B	ENST00000294353.6	8093	14	-60	4651	-18	-4651	multi-exon	FALSE	canonical	1	72727	junction_1	28220.186627901832	NA	1	NA	TRUE	NA	NA	NA	C	coding	744	2235	206	2440	70.0	-4	True	NA	NA
PB.6433.8	chr2	-	2280	12	novel_in_catalog	THUMPD2	novel	3148	8	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	1	12594	junction_9	60110.766510083304	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	28	990	20.0	-20	True	ATTAAA	-18
PB.413.2	chr1	+	4124	14	full-splice_match	ZYG11B	ENST00000294353.6	8093	14	-82	4051	-40	-4051	multi-exon	FALSE	canonical	1	72727	junction_1	28220.186627901832	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	228	2462	55.0	-68	False	NA	NA
PB.413.3	chr1	+	5790	15	novel_not_in_catalog	ZYG11B	novel	2294	14	NA	NA	-20	-1690	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	45357.28979953701	NA	3	1	TRUE	NA	NA	NA	C	coding	744	2235	208	2442	95.0	-6	True	NA	NA
PB.9782.3	chr6	-	3871	5	full-splice_match	C6orf62	ENST00000378119.8	4134	5	185	78	185	-78	multi-exon	FALSE	canonical	1	1559205	junction_4	195373.53375585444	NA	7	NA	TRUE	NA	NA	NA	C	coding	229	690	1984	2673	90.0	267	False	NA	NA
PB.9782.2	chr6	-	1879	5	full-splice_match	C6orf62	ENST00000378119.8	4134	5	2177	78	1339	-78	multi-exon	FALSE	canonical	1	1559205	junction_4	195373.53375585444	NA	2	NA	TRUE	NA	NA	NA	C	coding	196	591	91	681	90.0	2259	False	NA	NA
PB.12154.1	chrX	-	2538	16	incomplete-splice_match	ATRX	ENST00000395603.7	10218	34	104206	94022	131	0	internal_fragment	FALSE	canonical	1	228759	junction_8	54130.69795966056	NA	8	2	TRUE	NA	NA	NA	C	coding	811	2433	104	2536	45.0	861	False	NA	NA
PB.5388.6	chr18	-	3852	20	novel_in_catalog	PPP4R1	novel	3925	20	NA	NA	-21	-14	combination_of_known_junctions	FALSE	canonical	1	8761	junction_19	142640.10115689717	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	30	2987	50.0	1988	False	AATAAA	-8
PB.12154.3	chrX	-	3643	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-3	176953	1	474	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	0	NA	TRUE	NA	NA	NA	C	coding	1141	3423	219	3641	65.0	-4	True	AATAGA	-28
PB.12154.2	chrX	-	4579	15	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-22	147451	-5	1829	3prime_fragment	FALSE	canonical	1	135312	junction_9	65417.77943607486	NA	0	NA	TRUE	NA	NA	NA	C	coding	1447	4341	238	4578	60.0	-23	False	TTTAAA	-34
PB.2263.10	chr11	-	4302	15	novel_in_catalog	NPAT	novel	6117	18	NA	NA	-2	282	intron_retention	FALSE	canonical	1	3865	junction_8	50149.48341769061	NA	0	NA	TRUE	NA	NA	NA	C	coding	1095	3285	1016	4300	70.0	-1	True	AGTAAA	-24
PB.12154.4	chrX	-	3545	8	incomplete-splice_match	ATRX	ENST00000395603.7	10218	34	-2	176101	-2	491	3prime_fragment	FALSE	canonical	1	37413	junction_3	88961.08634013147	NA	1	NA	TRUE	NA	NA	NA	C	coding	1109	3327	218	3544	45.0	-3	True	AATAGA	-45
PB.12154.7	chrX	-	3522	10	full-splice_match	ATRX	ENST00000624032.3	3071	10	-15	-436	2	436	multi-exon	FALSE	canonical	1	39846	junction_1	83146.069610381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1100	3300	223	3522	55.0	-8	True	NA	NA
PB.12154.6	chrX	-	3606	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-4	176991	0	436	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3387	220	3606	55.0	-5	True	NA	NA
PB.9005.5	chr4	+	3046	22	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	239	9508	239	-240	3prime_fragment	FALSE	canonical	1	608699	junction_1	238962.78339071284	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2652	395	3046	65.0	0	True	NA	NA
PB.9005.4	chr4	+	4279	24	full-splice_match	SMARCA5	ENST00000283131.3	7923	24	526	3118	526	-3118	multi-exon	FALSE	canonical	1	608699	junction_1	234989.39191122877	NA	1	NA	TRUE	NA	NA	NA	C	coding	995	2988	108	3095	15.0	2	True	AATAAA	-37
PB.9005.7	chr4	+	3783	24	full-splice_match	SMARCA5	ENST00000283131.3	7923	24	217	3923	217	-3923	multi-exon	FALSE	canonical	1	608699	junction_1	234989.39191122877	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	417	3404	25.0	-22	True	AAAAAG	-36
PB.9005.6	chr4	+	2168	16	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	455	13525	455	-395	3prime_fragment	FALSE	canonical	1	608699	junction_1	131022.72156867382	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1989	179	2167	60.0	-2310	False	NA	NA
PB.9005.1	chr4	+	2085	14	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	217	17054	217	-3924	3prime_fragment	FALSE	canonical	1	608699	junction_1	105384.58481302195	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1668	417	2084	55.0	-22	True	NA	NA
PB.4950.8	chr17	+	2473	15	novel_not_in_catalog	STARD3	novel	2132	15	NA	NA	0	0	intron_retention	TRUE	canonical	1	2514	junction_9	203781.24954987183	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	131	799	80.0	6	True	ATTAAA	-12
PB.9005.3	chr4	+	3281	23	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	243	7413	243	1855	3prime_fragment	FALSE	canonical	1	608699	junction_1	235482.2690143544	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2889	391	3279	60.0	4	True	AAGAAA	-11
PB.9005.2	chr4	+	2711	19	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	188	11522	188	1608	3prime_fragment	FALSE	canonical	1	608699	junction_1	158171.7412140427	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2265	446	2710	65.0	-2577	False	NA	NA
PB.3806.12	chr15	-	3145	6	novel_in_catalog	ZNF106	novel	10460	19	NA	NA	-18	2	no_combination_of_known_junctions	FALSE	canonical	1	12868	junction_3	127785.94101386897	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2889	255	3143	80.0	-1	True	NA	NA
PB.4950.4	chr17	+	3269	12	novel_in_catalog	STARD3	novel	2132	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	411427	junction_1	97223.99218282975	NA	19	NA	TRUE	NA	NA	NA	C	coding	157	474	138	611	75.0	-1	True	ATTAAA	-11
PB.4950.7	chr17	+	2053	15	novel_in_catalog	STARD3	novel	2132	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	14276	junction_14	165082.78029851185	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	132	1637	80.0	5	True	ATTAAA	-12
PB.3806.11	chr15	-	3246	7	incomplete-splice_match	ZNF106	ENST00000564754.6	7347	22	118	30752	82	2	3prime_fragment	FALSE	canonical	1	182929	junction_6	71640.06535549006	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3168	77	3244	80.0	99	False	NA	NA
PB.4950.1	chr17	+	2642	13	novel_in_catalog	STARD3	novel	2132	15	NA	NA	-23	-1	intron_retention	TRUE	canonical	1	411427	junction_1	101969.09223537079	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	168	641	75.0	0	True	ATTAAA	-11
PB.3806.17	chr15	-	1665	3	novel_not_in_catalog	ZNF106	novel	10460	19	NA	NA	-9	671	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	5024.5	NA	1	1	TRUE	NA	NA	NA	C	coding	185	555	1110	1664	75.0	-10	False	AATACA	-39
PB.4950.3	chr17	+	2252	14	novel_in_catalog	STARD3	novel	2132	15	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	411427	junction_1	98202.34535467961	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	156	824	75.0	-19	True	ATTAAA	-11
PB.4950.2	chr17	+	2050	15	novel_in_catalog	STARD3	novel	2132	15	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	52492	junction_4	157015.696408343	NA	1	1	TRUE	NA	NA	NA	C	coding	139	420	1071	1490	75.0	2	True	ATTAAA	-11
PB.6433.3	chr2	-	3306	10	novel_in_catalog	THUMPD2	novel	3148	8	NA	NA	-9	0	intron_retention	FALSE	canonical	1	40314	junction_9	53399.53631925197	NA	2	1	TRUE	NA	NA	NA	C	coding	262	789	38	826	25.0	-30	True	ATTAAA	-19
PB.11289.2	chr8	+	1946	11	full-splice_match	DCAF13	ENST00000612750.4	1967	11	18	3	-5	0	multi-exon	FALSE	canonical	1	195117	junction_4	159386.95245122796	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	41	1378	20.0	-12	True	ATTAAA	-18
PB.6289.1	chr2	+	2387	11	novel_in_catalog	TRAPPC12	novel	2483	12	NA	NA	5	-1	no_combination_of_known_junctions	FALSE	canonical	1	8329	junction_3	168201.96507758167	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	191	2284	5.0	-31	True	AATAAA	-12
PB.849.16	chr1	-	2876	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	3	-181	intron_retention	FALSE	canonical	1	28812	junction_12	240508.37947679817	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	225	2018	40.0	-23	True	ATTAAA	-21
PB.6863.4	chr2	-	2836	4	novel_in_catalog	NFE2L2	novel	455	2	NA	NA	-79	-4	combination_of_known_junctions	FALSE	canonical	1	394758	junction_3	421025.80205757247	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	1134	2363	25.0	-35	True	AATAAA	-17
PB.6433.7	chr2	-	2537	10	novel_in_catalog	THUMPD2	novel	3148	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	13636	junction_8	54482.268604078105	NA	3	NA	TRUE	NA	NA	NA	C	coding	210	633	278	910	20.0	-1	True	ATTAAA	-18
PB.6863.6	chr2	-	1691	5	full-splice_match	NFE2L2	ENST00000397062.7	2853	5	408	754	-64	-69	multi-exon	FALSE	canonical	1	394758	junction_4	364624.58935827063	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	148	1689	70.0	-20	True	AATAAA	-21
PB.6863.7	chr2	-	1638	5	full-splice_match	NFE2L2	ENST00000397063.8	2651	5	259	754	-4	-69	multi-exon	FALSE	canonical	1	185164	junction_4	449858.7203147089	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1494	143	1636	70.0	-5	True	AATAAA	-21
PB.6863.1	chr2	-	2390	5	full-splice_match	NFE2L2	ENST00000397062.7	2853	5	365	98	57	-95	multi-exon	FALSE	canonical	1	394758	junction_4	364624.58935827063	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	194	2008	45.0	364	False	TATAAA	-13
PB.8083.22	chr3	-	4023	11	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-6788	302	no_combination_of_known_junctions	FALSE	canonical	1	45376	junction_4	447063.767290182	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2526	32	2557	45.0	1612	False	AATAAA	-7
PB.6863.3	chr2	-	2367	5	novel_not_in_catalog	NFE2L2	novel	455	2	NA	NA	-73	-3	any annotated donor/acceptor	FALSE	canonical	1	3893	junction_1	557367.1423206498	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	157	1893	25.0	-29	True	AATAAA	-18
PB.11798.2	chr9	+	1910	10	full-splice_match	SLC2A8	ENST00000373371.7	2172	10	28	234	15	12	multi-exon	FALSE	canonical	1	45092	junction_2	51975.6576402435	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	62	1495	15.0	-1	True	AATAAA	-15
PB.11798.1	chr9	+	1732	8	full-splice_match	SLC2A8	ENST00000610552.4	1763	8	31	0	14	0	multi-exon	TRUE	canonical	1	40782	junction_1	51267.300332548766	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	182	1126	80.0	-2	True	NA	NA
PB.6433.4	chr2	-	3145	9	novel_in_catalog	THUMPD2	novel	3148	8	NA	NA	3	0	intron_retention	FALSE	canonical	1	40314	junction_8	53787.76645980362	NA	3	1	TRUE	NA	NA	NA	C	coding	269	810	1908	2717	25.0	10	True	ATTAAA	-19
PB.2033.1	chr11	-	3429	5	full-splice_match	EHD1	ENST00000320631.7	4551	5	26	1096	26	-7	multi-exon	FALSE	canonical	1	715496	junction_2	110818.81347496914	NA	17	1	TRUE	NA	NA	NA	C	coding	534	1605	230	1834	15.0	9278	False	ATTAAA	-13
PB.3244.9	chr13	+	3963	30	full-splice_match	TPP2	ENST00000376052.4	5447	30	-16	1500	4	-3	multi-exon	FALSE	canonical	1	85601	junction_23	113833.28951513222	NA	12	3	TRUE	NA	NA	NA	C	coding	1262	3789	33	3821	20.0	2	True	ATTAAA	-20
PB.2668.1	chr12	+	2120	3	full-splice_match	ZC3H10	ENST00000257940.6	7228	3	100	5008	-1	1678	multi-exon	FALSE	canonical	1	39403	junction_1	11696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	177	1481	30.0	-7	True	AATAAA	-31
PB.2668.3	chr12	+	4332	3	full-splice_match	ZC3H10	ENST00000257940.6	7228	3	108	2788	5	-2788	multi-exon	FALSE	canonical	1	39403	junction_1	11696.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	169	1473	45.0	1	True	NA	NA
PB.2668.2	chr12	+	2968	3	full-splice_match	ZC3H10	ENST00000257940.6	7228	3	101	4159	0	2527	multi-exon	FALSE	canonical	1	39403	junction_1	11696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	176	1480	35.0	-6	True	ATTAAA	-19
PB.403.5	chr1	-	3707	33	novel_not_in_catalog	NRDC	novel	1660	16	NA	NA	20	0	any annotated donor/acceptor	FALSE	canonical	1	11258	junction_28	478665.63202151726	NA	4	1	TRUE	NA	NA	NA	C	coding	853	2562	1122	3683	45.0	-2	True	AATAAA	-24
PB.403.4	chr1	-	3810	33	full-splice_match	NRDC	ENST00000354831.11	3895	33	64	21	-18	0	multi-exon	FALSE	canonical	1	54329	junction_31	444400.28931092273	NA	2	NA	TRUE	NA	NA	NA	C	coding	1219	3660	127	3786	45.0	63	False	AATAAA	-24
PB.7501.8	chr21	+	8233	12	full-splice_match	SON	ENST00000356577.8	8813	12	444	136	-2	-136	multi-exon	FALSE	canonical	1	73561	junction_11	388831.8571722868	NA	3	NA	TRUE	NA	NA	NA	C	coding	2426	7281	32	7312	45.0	-11	True	AATAAA	-33
PB.403.6	chr1	-	3683	32	novel_in_catalog	NRDC	novel	1660	16	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	12256	junction_30	415921.2682351143	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	915	3659	45.0	1	True	AATAAA	-24
PB.403.9	chr1	-	3270	31	novel_not_in_catalog	NRDC	novel	1660	16	NA	NA	13	0	any annotated donor/acceptor	FALSE	canonical	1	9842	junction_30	390244.639888223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	187	3246	45.0	12	False	AATAAA	-24
PB.403.8	chr1	-	3520	30	novel_in_catalog	NRDC	novel	1660	16	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	7439	junction_4	362382.7759078056	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	125	3496	45.0	65	False	AATAAA	-24
PB.11401.7	chr8	-	4425	38	novel_not_in_catalog	CPSF1	novel	789	6	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	canonical	1	759	junction_37	200530.90472487034	NA	0	NA	TRUE	NA	NA	NA	C	coding	1426	4281	60	4340	20.0	8	True	AAAACA	-23
PB.1938.9	chr11	-	5171	36	novel_not_in_catalog	NUP160	novel	5376	36	NA	NA	-16	-36	any annotated donor/acceptor	FALSE	canonical	1	10749	junction_3	105663.11327299627	NA	2	NA	TRUE	NA	NA	NA	C	coding	1416	4251	33	4283	25.0	-1	True	NA	NA
PB.6873.1	chr2	+	2479	8	full-splice_match	PLEKHA3	ENST00000234453.9	13880	8	-4	11405	-4	1096	multi-exon	FALSE	canonical	1	200	junction_7	30611.610686409927	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	407	1309	45.0	-13	True	AATAAA	-23
PB.6921.26	chr2	-	6606	24	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	-3	278	intron_retention	FALSE	canonical	1	111010	junction_6	730409.520634228	NA	4	NA	TRUE	NA	NA	NA	C	coding	549	1650	2309	3958	10.0	-3	True	AATAAA	-19
PB.6921.27	chr2	-	5911	25	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	1	278	intron_retention	FALSE	canonical	1	35517	junction_21	627354.4038692351	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	2109	5585	10.0	1	True	AATAAA	-19
PB.6962.1	chr2	+	1833	10	full-splice_match	ABI2	ENST00000261017.9	6484	10	0	4651	0	-6	multi-exon	FALSE	canonical	1	182102	junction_8	76192.51460577094	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	236	1663	30.0	-24	True	ATTAAA	-21
PB.1938.1	chr11	-	5223	36	full-splice_match	NUP160	ENST00000378460.6	5376	36	117	36	-16	-36	multi-exon	FALSE	canonical	1	253262	junction_32	83031.56172781528	NA	0	NA	TRUE	NA	NA	NA	C	coding	1402	4209	33	4241	25.0	-1	True	NA	NA
PB.1938.2	chr11	-	5114	35	novel_in_catalog	NUP160	novel	5376	36	NA	NA	-3	-27	no_combination_of_known_junctions	FALSE	canonical	1	1217	junction_1	102100.11200003007	NA	0	NA	TRUE	NA	NA	NA	C	coding	1367	4104	20	4123	10.0	12	True	NA	NA
PB.6921.29	chr2	-	5624	26	novel_not_in_catalog	SF3B1	novel	6526	25	NA	NA	-19	278	any annotated donor/acceptor	FALSE	canonical	1	35517	junction_22	723722.2019555846	NA	1	NA	TRUE	NA	NA	NA	C	coding	1158	3477	1822	5298	10.0	-19	True	AATAAA	-19
PB.6256.3	chr19	+	5286	3	full-splice_match	ZNF776	ENST00000317178.9	5292	3	16	-10	-10	10	multi-exon	FALSE	canonical	1	100049	junction_1	11676.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	518	1557	248	1804	25.0	-3	True	NA	NA
PB.1938.6	chr11	-	5322	37	novel_in_catalog	NUP160	novel	5376	36	NA	NA	1	-36	combination_of_known_junctions	FALSE	canonical	1	3460	junction_29	122812.02109252271	NA	2	NA	TRUE	NA	NA	NA	C	coding	1442	4329	12	4340	25.0	20	True	NA	NA
PB.87.6	chr1	+	2642	7	novel_not_in_catalog	TARDBP	novel	701	5	NA	NA	-2	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	388425.16392983176	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	267	1259	30.0	-8	True	AATAAA	-9
PB.87.7	chr1	+	3447	6	full-splice_match	TARDBP	ENST00000240185.7	5367	6	252	1668	-1	-267	multi-exon	FALSE	canonical	1	472865	junction_2	288658.82028997486	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	105	1349	30.0	-7	True	AATAAA	-17
PB.87.4	chr1	+	2563	5	full-splice_match	TARDBP	ENST00000621715.4	816	5	-20	-1727	-3	-6	multi-exon	FALSE	canonical	1	5659	junction_4	313893.67627072387	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	107	1180	30.0	-9	True	AATAAA	-9
PB.87.5	chr1	+	2826	7	novel_not_in_catalog	TARDBP	novel	701	5	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	1075	junction_3	432537.71169999347	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	106	1443	30.0	-8	True	AATAAA	-9
PB.7501.9	chr21	+	5423	3	incomplete-splice_match	SON	ENST00000381679.8	7860	5	5	4425	0	-4425	3prime_fragment	FALSE	canonical	1	1153900	junction_2	65715.5	NA	94	NA	TRUE	NA	NA	NA	C	coding	1800	5400	24	5423	75.0	-3	True	AAAAAG	-39
PB.87.3	chr1	+	3421	7	novel_in_catalog	TARDBP	novel	701	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	64270	junction_6	371183.66100373934	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	114	1358	15.0	-16	True	AATAAA	-19
PB.87.1	chr1	+	2724	6	full-splice_match	TARDBP	ENST00000240185.7	5367	6	260	2383	6	-6	multi-exon	FALSE	canonical	1	472865	junction_2	288658.82028997486	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	97	1341	30.0	1	True	AATAAA	-9
PB.87.8	chr1	+	1721	7	novel_not_in_catalog	TARDBP	novel	701	5	NA	NA	-1	-6	intron_retention	FALSE	canonical	0	0	junction_6	388425.16392983176	NA	6	1	TRUE	NA	NA	NA	C	coding	275	828	105	932	30.0	-7	True	AATAAA	-9
PB.87.9	chr1	+	4276	6	full-splice_match	TARDBP	ENST00000240185.7	5367	6	255	836	1	92	multi-exon	FALSE	canonical	1	472865	junction_2	288658.82028997486	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	102	1346	80.0	-4	True	TTTAAA	-13
PB.240.13	chr1	-	4122	23	novel_not_in_catalog	PUM1	novel	4631	18	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	6573	junction_15	180270.50961539382	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3642	114	3755	85.0	-1	True	AAAAAG	-5
PB.619.2	chr1	+	3615	20	novel_in_catalog	MOV10	novel	347	2	NA	NA	-42	1	intron_retention	FALSE	canonical	1	107951	junction_1	107861.33132392503	NA	1	NA	TRUE	NA	NA	NA	C	coding	933	2802	140	2941	35.0	-3	True	AAGAAA	-29
PB.6962.2	chr2	+	4072	10	full-splice_match	ABI2	ENST00000261017.9	6484	10	-8	2420	-8	1157	multi-exon	TRUE	canonical	1	182102	junction_8	76192.51460577094	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	244	1671	85.0	-32	True	NA	NA
PB.11368.4	chr8	+	2427	3	incomplete-splice_match	GLI4	ENST00000340042.1	1341	4	8	0	8	0	intron_retention	FALSE	canonical	1	42855	junction_1	26992.5	NA	3	NA	TRUE	NA	NA	NA	A	coding	381	1146	1157	2302	20.0	0	True	AATAAA	-18
PB.9222.1	chr5	+	5759	30	full-splice_match	ITGA2	ENST00000296585.9	7869	30	-45	2155	-45	1790	multi-exon	FALSE	canonical	1	125089	junction_6	27789.456264419015	NA	2	NA	TRUE	NA	NA	NA	C	coding	1181	3546	189	3734	85.0	-3520	False	NA	NA
PB.6792.1	chr2	-	3251	9	full-splice_match	ACVR1C	ENST00000243349.12	8994	9	119	5624	119	1351	multi-exon	FALSE	canonical	1	8176	junction_8	4012.185836610762	NA	0	NA	TRUE	NA	NA	NA	A	coding	493	1482	243	1724	90.0	0	True	AGTAAA	-17
PB.5383.1	chr18	+	825	8	full-splice_match	NDUFV2	ENST00000318388.10	930	8	98	7	33	-3	multi-exon	FALSE	canonical	1	4241	junction_3	571287.105845267	NA	0	NA	TRUE	NA	NA	NA	A	coding	249	750	17	766	25.0	-3	True	AATAAA	-22
PB.8763.3	chr4	-	1763	6	full-splice_match	GNPDA2	ENST00000507534.5	1050	6	-65	-648	0	-1	multi-exon	FALSE	canonical	1	18446	junction_5	73374.63337312153	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	202	822	50.0	29	False	AATAAA	-31
PB.663.1	chr1	-	2110	3	full-splice_match	FAM72C	ENST00000369175.4	1658	3	-19	-433	-19	-81	multi-exon	FALSE	canonical	1	14533	junction_1	6131.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-12
PB.1020.4	chr1	-	2690	8	novel_not_in_catalog	DENND1B	novel	8378	23	NA	NA	14	-3253	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	22296.34323271465	NA	2	NA	TRUE	NA	NA	NA	C	coding	163	492	325	816	20.0	0	True	AATAAA	-10
PB.8361.14	chr3	-	1732	2	incomplete-splice_match	SLC12A8	ENST00000465475.5	1949	6	15283	14	-739	0	5prime_fragment	FALSE	canonical	1	9132	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	C	coding	244	735	170	904	60.0	2289	False	NA	NA
PB.6962.3	chr2	+	1747	9	novel_in_catalog	ABI2	novel	22209	11	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	1	187621	junction_7	67184.69453852101	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	237	1577	30.0	-25	True	ATTAAA	-21
PB.1020.3	chr1	-	3192	21	novel_in_catalog	DENND1B	novel	8378	23	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	8665	junction_16	15653.491070285248	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	652	2376	85.0	-27	True	CATAAA	-11
PB.1020.1	chr1	-	3310	23	full-splice_match	DENND1B	ENST00000620048.5	8378	23	172	4896	4	0	multi-exon	FALSE	canonical	1	20628	junction_16	14474.45829015333	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	167	2494	85.0	-15	True	CATAAA	-11
PB.2652.2	chr12	-	2149	12	novel_not_in_catalog	TESPA1	novel	4188	9	NA	NA	-2	6	any annotated donor/acceptor	FALSE	canonical	1	52980	junction_2	59419.34114383078	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	210	1775	35.0	13	True	ATTAAA	-28
PB.2652.3	chr12	-	2111	11	full-splice_match	TESPA1	ENST00000449076.5	2010	11	-93	-8	-19	5	multi-exon	FALSE	canonical	1	67201	junction_10	46154.188260763505	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	227	1792	35.0	-4	True	ATTAAA	-27
PB.2652.1	chr12	-	3082	13	novel_in_catalog	TESPA1	novel	4188	9	NA	NA	13	551	combination_of_known_junctions	TRUE	canonical	1	6097	junction_11	73906.09783179073	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	525	2090	95.0	43	True	AATAAA	-11
PB.2652.4	chr12	-	2267	12	novel_in_catalog	TESPA1	novel	4188	9	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	1	15352	junction_10	66024.28113683907	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	384	1949	35.0	12	True	ATTAAA	-26
PB.2652.5	chr12	-	2784	10	incomplete-splice_match	TESPA1	ENST00000449076.5	2010	11	-60	10063	-1	2999	3prime_fragment	FALSE	canonical	1	67201	junction_9	48587.13127090137	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	194	1759	45.0	29	True	ATTAAA	-19
PB.8763.2	chr4	-	2020	6	full-splice_match	GNPDA2	ENST00000507534.5	1050	6	-59	-911	6	-9	multi-exon	FALSE	canonical	1	18446	junction_5	73374.63337312153	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	196	816	50.0	-27	True	AATAAA	-7
PB.7584.18	chr22	+	2597	1	intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	NA	False	NA	NA
PB.7584.17	chr22	+	1966	7	intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	coding	110	333	90	422	30.0	NA	False	AATAAA	-17
PB.7584.16	chr22	+	2071	7	intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	1	FALSE	NA	NA	NA	A	coding	92	279	90	368	25.0	NA	False	TATAAA	-24
PB.7584.15	chr22	+	1504	5	intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	110	333	110	442	25.0	NA	False	NA	NA
PB.7584.14	chr22	+	2575	4	intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-10
PB.7584.13	chr22	+	1886	7	intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-16
PB.7584.12	chr22	+	2134	8	intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	coding	110	333	111	443	30.0	NA	False	AATAAA	-17
PB.7584.11	chr22	+	2860	5	intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	A	coding	110	333	111	443	15.0	NA	False	AATAAA	-12
PB.7584.10	chr22	+	2965	3	intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	A	coding	129	390	111	500	30.0	NA	False	AATAAA	-14
PB.12239.1	chrX	-	2421	11	full-splice_match	SEPT6	ENST00000360156.11	2609	11	185	3	185	-3	multi-exon	FALSE	canonical	1	12298	junction_1	344868.3008410602	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	81	1364	25.0	5	True	AATAAA	-16
PB.5466.29	chr18	-	2812	2	incomplete-splice_match	PIAS2	ENST00000590127.5	1838	11	20	60618	0	2310	3prime_fragment	FALSE	canonical	1	90183	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	196	591	110	700	65.0	50	True	NA	NA
PB.9533.12	chr5	+	1777	8	novel_in_catalog	RNF14	novel	938	4	NA	NA	13	-1136	combination_of_known_junctions	FALSE	canonical	1	22735	junction_1	153591.55356559774	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	472	1518	50.0	0	True	NA	NA
PB.1116.14	chr1	+	4457	7	novel_in_catalog	VASH2	novel	1369	9	NA	NA	9	-2	intron_retention	FALSE	canonical	1	13263	junction_3	23003.366287470963	NA	4	NA	TRUE	NA	NA	NA	C	coding	147	444	1015	1458	25.0	10	True	AATAAA	-17
PB.5466.28	chr18	-	2197	11	full-splice_match	PIAS2	ENST00000590127.5	1838	11	-15	-344	14	344	multi-exon	FALSE	canonical	1	90183	junction_10	34004.316846688744	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	145	1668	20.0	15	True	NA	NA
PB.9533.11	chr5	+	3067	9	novel_not_in_catalog	RNF14	novel	938	4	NA	NA	16	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	135590.25943075705	NA	7	1	TRUE	NA	NA	NA	C	coding	474	1425	248	1672	30.0	3	True	NA	NA
PB.3528.1	chr14	+	2704	7	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	-6	intron_retention	FALSE	canonical	1	2160182	junction_1	1080825.7716390842	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1730	2167	25.0	0	True	AATAAA	-8
PB.3528.3	chr14	+	4890	1	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	0	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-30	True	AATAAA	-11
PB.3528.2	chr14	+	2603	7	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-6	-54	intron_retention	FALSE	canonical	1	2160182	junction_1	1080825.7716390842	NA	2	1	TRUE	NA	NA	NA	C	coding	145	438	1766	2203	40.0	-36	True	ATTAAA	-23
PB.3528.5	chr14	+	3462	5	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	5	0	intron_retention	FALSE	canonical	1	2160182	junction_1	1318142.2727348849	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	147	470	5.0	-13	True	AATAAA	-14
PB.3528.4	chr14	+	3141	5	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	4	0	intron_retention	FALSE	canonical	1	2160182	junction_1	1226255.1024540123	NA	5	1	TRUE	NA	NA	NA	C	coding	145	438	2160	2597	5.0	-22	True	AATAAA	-15
PB.3528.7	chr14	+	3239	5	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	16	-6	intron_retention	FALSE	canonical	1	544887	junction_1	1843868.4458677326	NA	3	NA	TRUE	NA	NA	NA	C	coding	145	438	2265	2702	25.0	-2	True	AATAAA	-8
PB.3528.6	chr14	+	3882	5	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	7	-6	intron_retention	FALSE	canonical	1	3760735	junction_4	734452.2677044353	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	2908	3345	25.0	-11	True	AATAAA	-8
PB.3106.20	chr13	-	2694	9	novel_in_catalog	SPART	novel	4789	9	NA	NA	-103	-145	no_combination_of_known_junctions	FALSE	canonical	1	4459	junction_8	169174.6889490269	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	76	2076	70.0	-27	True	NA	NA
PB.3106.21	chr13	-	2632	9	full-splice_match	SPART	ENST00000438666.6	4789	9	-79	2236	-79	-272	multi-exon	FALSE	canonical	1	138990	junction_8	127840.2251200082	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	141	2141	70.0	-3	True	NA	NA
PB.3106.22	chr13	-	2746	10	novel_in_catalog	SPART	novel	4789	9	NA	NA	16	-272	no_combination_of_known_junctions	FALSE	canonical	1	21718	junction_9	190983.1139117595	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	255	2255	70.0	-18	True	NA	NA
PB.3106.23	chr13	-	2654	9	full-splice_match	SPART	ENST00000451493.5	4944	9	56	2234	36	-272	multi-exon	FALSE	canonical	1	113809	junction_8	135424.91500620372	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	163	2163	70.0	2	True	NA	NA
PB.3106.24	chr13	-	2611	9	novel_in_catalog	SPART	novel	4789	9	NA	NA	63	-272	no_combination_of_known_junctions	FALSE	canonical	1	4459	junction_8	169174.6889490269	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	120	2120	70.0	313	False	NA	NA
PB.6962.5	chr2	+	3751	10	novel_not_in_catalog	ABI2	novel	22209	11	NA	NA	0	1157	any annotated donor/acceptor	FALSE	canonical	1	31760	junction_9	114120.18888494623	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	236	1573	85.0	-24	True	NA	NA
PB.7006.1	chr2	+	2521	7	novel_in_catalog	CTDSP1	novel	786	7	NA	NA	114	0	combination_of_known_junctions	TRUE	canonical	1	369943	junction_1	278495.1528730896	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	223	1005	5.0	-1	True	ACTAAA	-19
PB.7196.1	chr20	+	3083	5	incomplete-splice_match	RIN2	ENST00000484638.1	4053	9	40026	1	40026	-1	5prime_fragment	FALSE	canonical	1	140723	junction_1	56620.22124371734	NA	1	NA	TRUE	NA	NA	NA	A	coding	464	1395	169	1563	0.0	4	True	NA	NA
PB.2482.3	chr12	+	2685	5	full-splice_match	EMP1	ENST00000256951.9	5921	5	70	3166	0	0	multi-exon	FALSE	canonical	1	810822	junction_2	164278.12128369376	NA	25	NA	TRUE	NA	NA	NA	C	coding	157	474	130	603	15.0	0	True	TATAAA	-21
PB.2482.2	chr12	+	5852	5	full-splice_match	EMP1	ENST00000256951.9	5921	5	70	-1	0	1	multi-exon	FALSE	canonical	1	810822	junction_2	164278.12128369376	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	130	603	30.0	0	True	NA	NA
PB.2482.1	chr12	+	2400	5	full-splice_match	EMP1	ENST00000256951.9	5921	5	10	3511	0	-345	multi-exon	FALSE	canonical	1	810822	junction_2	164278.12128369376	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	190	663	50.0	0	True	NA	NA
PB.6289.8	chr2	+	2469	4	full-splice_match	TRAPPC12	ENST00000469400.1	720	4	-1746	-3	-1746	-1	multi-exon	FALSE	canonical	1	6955	junction_1	271371.3048504248	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	2013	2360	0.0	NA	False	AATAAA	-18
PB.11203.11	chr8	-	1969	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	-5	2077	-5	-231	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	121	675	35.0	0	True	ATTAAA	-29
PB.10169.19	chr6	-	6049	39	full-splice_match	LAMA4	ENST00000230538.11	6547	39	122	376	-5	157	multi-exon	FALSE	canonical	1	109876	junction_32	71747.20370747632	NA	0	NA	TRUE	NA	NA	NA	C	coding	1823	5472	277	5748	50.0	128	False	AATAAA	-15
PB.7322.1	chr20	-	2988	16	full-splice_match	PLTP	ENST00000372431.7	1743	16	-8	-1237	0	1098	multi-exon	FALSE	canonical	1	724409	junction_7	248794.34814064586	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	89	1570	30.0	-1	True	ACTAAA	-26
PB.10169.16	chr6	-	7545	38	novel_in_catalog	LAMA4	novel	6547	39	NA	NA	-8	175	intron_retention	FALSE	canonical	1	121944	junction_37	68297.93177969223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1478	4437	2790	7226	25.0	-9	True	AATAAA	-33
PB.7322.3	chr20	-	1753	16	full-splice_match	PLTP	ENST00000372431.7	1743	16	-8	-2	0	2	multi-exon	FALSE	canonical	1	724409	junction_7	248794.34814064586	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	89	1570	5.0	-1	True	NA	NA
PB.7322.2	chr20	-	1964	16	full-splice_match	PLTP	ENST00000372431.7	1743	16	-88	-133	-80	-6	multi-exon	FALSE	canonical	1	724409	junction_7	248794.34814064586	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	169	1650	15.0	-81	False	AATAAA	-13
PB.10169.13	chr6	-	6112	39	novel_in_catalog	LAMA4	novel	6547	39	NA	NA	-26	175	combination_of_known_junctions	FALSE	canonical	1	405	junction_38	84572.96448082854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1823	5472	322	5793	25.0	-244	False	AATAAA	-33
PB.7322.4	chr20	-	1528	14	full-splice_match	PLTP	ENST00000372420.5	1530	14	2	0	2	0	multi-exon	FALSE	canonical	1	28787	junction_13	381755.4516231872	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	130	1347	5.0	1219	False	NA	NA
PB.10169.10	chr6	-	6060	39	full-splice_match	LAMA4	ENST00000389463.8	6297	39	-5	242	-5	177	multi-exon	FALSE	canonical	1	174854	junction_38	67148.45941614678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1816	5451	289	5739	20.0	116	False	AATAAA	-35
PB.465.41	chr1	-	2643	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-31	-991	-4	509	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	104	1312	45.0	-2	True	ATTAAA	-18
PB.619.7	chr1	+	4717	18	novel_in_catalog	MOV10	novel	347	2	NA	NA	-14	0	intron_retention	FALSE	canonical	1	107951	junction_1	113335.09312054938	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	112	2814	35.0	-272	False	AAGAAA	-28
PB.11428.2	chr9	-	2254	19	novel_not_in_catalog	PUM3	novel	340	4	NA	NA	141	21549	any annotated donor/acceptor	FALSE	canonical	1	1483	junction_1	119945.07253333827	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	67	2013	45.0	-6	True	NA	NA
PB.6962.7	chr2	+	6468	10	novel_in_catalog	ABI2	novel	22209	11	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	15870	junction_1	131367.06443059124	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	451	1653	20.0	-21	True	AATAAA	-14
PB.2322.2	chr11	-	2704	16	full-splice_match	MCAM	ENST00000264036.5	3313	16	-18	627	-4	-170	multi-exon	FALSE	canonical	1	522689	junction_15	290070.79266723077	NA	12	2	TRUE	NA	NA	NA	C	coding	646	1941	34	1974	80.0	-5	True	NA	NA
PB.9545.18	chr5	+	2606	17	incomplete-splice_match	TCERG1	ENST00000394421.6	3633	21	-7	7103	-7	-282	3prime_fragment	FALSE	canonical	1	212876	junction_11	104828.42426762692	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2580	26	2605	70.0	-8	True	NA	NA
PB.2322.1	chr11	-	2901	16	full-splice_match	MCAM	ENST00000264036.5	3313	16	-45	457	-31	0	multi-exon	FALSE	canonical	1	522689	junction_15	290070.79266723077	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	61	2001	75.0	246	False	NA	NA
PB.7006.3	chr2	+	3233	6	incomplete-splice_match	CTDSP1	ENST00000273062.6	2638	7	810	1	-22	-1	5prime_fragment	FALSE	canonical	1	269796	junction_1	303471.4843759789	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	1356	1718	10.0	-3786	False	ACTAAA	-18
PB.3512.2	chr14	+	6618	29	full-splice_match	PLEKHH1	ENST00000329153.9	6604	29	-17	3	-17	-2	multi-exon	FALSE	canonical	1	33433	junction_1	43352.40553220284	NA	5	1	TRUE	NA	NA	NA	C	coding	1364	4095	150	4244	20.0	-6	True	AATAAA	-33
PB.9545.13	chr5	+	4241	23	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	34233	junction_12	195255.34817247003	NA	0	NA	TRUE	NA	NA	NA	C	coding	1115	3348	29	3376	30.0	-11	True	AATAAA	-17
PB.9545.10	chr5	+	2219	15	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	3	38	combination_of_known_junctions	FALSE	canonical	1	34233	junction_11	164858.34828516032	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2184	36	2219	60.0	-18	True	AATAAA	-25
PB.3512.1	chr14	+	6646	29	full-splice_match	PLEKHH1	ENST00000329153.9	6604	29	-223	181	-223	-9	multi-exon	FALSE	canonical	1	33433	junction_1	43352.40553220284	NA	1	NA	TRUE	NA	NA	NA	C	coding	1364	4095	356	4450	60.0	5	True	NA	NA
PB.9545.16	chr5	+	4189	22	full-splice_match	TCERG1	ENST00000296702.9	4654	22	11	454	-9	-1	multi-exon	FALSE	canonical	1	96933	junction_5	163130.04033960702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3297	28	3324	30.0	-10	True	AATAAA	-17
PB.9545.17	chr5	+	2660	18	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	-7	-279	combination_of_known_junctions	FALSE	canonical	1	34233	junction_11	165287.28373191343	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2634	26	2659	65.0	-8	True	NA	NA
PB.9545.14	chr5	+	4111	23	novel_not_in_catalog	TCERG1	novel	1984	11	NA	NA	-10	1	any annotated donor/acceptor	TRUE	canonical	1	18	junction_4	185807.95950998564	NA	3	NA	TRUE	NA	NA	NA	C	coding	1072	3219	29	3247	25.0	-11	True	AATAAA	-16
PB.9545.15	chr5	+	6701	21	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	-9	1	intron_retention	FALSE	canonical	1	31040	junction_4	174186.63437602637	NA	6	1	TRUE	NA	NA	NA	C	coding	455	1368	4470	5837	25.0	-10	True	AATAAA	-16
PB.8896.1	chr4	-	868	5	full-splice_match	H2AFZ	ENST00000296417.5	979	5	113	-2	-7	0	multi-exon	FALSE	canonical	1	2291621	junction_1	1874061.4596545887	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	106	492	25.0	-1	True	AATAAA	-17
PB.9750.1	chr6	-	2385	1	intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.262.8	chr1	+	2175	12	full-splice_match	RBBP4	ENST00000373493.9	7943	12	60	5708	-2	-148	multi-exon	FALSE	canonical	1	99065	junction_2	172483.3475357563	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	100	1377	15.0	-2	True	ATTAAA	-13
PB.262.9	chr1	+	1499	13	novel_not_in_catalog	RBBP4	novel	1788	12	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	189225.7367821382	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	96	1373	20.0	2	True	AATAAA	-15
PB.7602.8	chr22	-	4268	10	novel_in_catalog	DGCR2	novel	4361	9	NA	NA	153	-3	combination_of_known_junctions	FALSE	canonical	1	71861	junction_7	126874.64461058297	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	49	1692	25.0	157	False	AATAAA	-12
PB.262.1	chr1	+	2510	13	novel_in_catalog	RBBP4	novel	1788	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	7385	junction_12	195973.03126231142	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	159	1667	20.0	1	True	AATAAA	-21
PB.262.2	chr1	+	4008	12	full-splice_match	RBBP4	ENST00000373493.9	7943	12	152	3783	22	1771	multi-exon	FALSE	canonical	1	99065	junction_2	172483.3475357563	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	8	1285	75.0	90	False	NA	NA
PB.262.3	chr1	+	2720	12	full-splice_match	RBBP4	ENST00000373493.9	7943	12	132	5091	2	463	multi-exon	FALSE	canonical	1	99065	junction_2	172483.3475357563	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	28	1305	15.0	70	False	GATAAA	-17
PB.7602.2	chr22	-	4581	11	novel_not_in_catalog	DGCR2	novel	4361	9	NA	NA	22	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	195288.83928417417	NA	3	NA	TRUE	NA	NA	NA	C	coding	246	741	1264	2004	25.0	-21	True	AATAAA	-13
PB.7602.3	chr22	-	4311	9	novel_in_catalog	DGCR2	novel	4361	9	NA	NA	-12	-2	combination_of_known_junctions	TRUE	canonical	1	6737	junction_8	185508.4875059208	NA	1	NA	TRUE	NA	NA	NA	C	coding	506	1521	214	1734	25.0	-8	True	AATAAA	-13
PB.262.6	chr1	+	2249	12	full-splice_match	RBBP4	ENST00000373493.9	7943	12	134	5560	4	0	multi-exon	FALSE	canonical	1	99065	junction_2	172483.3475357563	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	26	1303	20.0	72	False	AATAAA	-15
PB.7602.1	chr22	-	4451	10	full-splice_match	DGCR2	ENST00000263196.11	4480	10	27	2	-20	-2	multi-exon	FALSE	non_canonical	0	0	junction_7	147190.18226753653	NA	6	NA	TRUE	NA	NA	NA	C	coding	550	1653	222	1874	25.0	-16	True	AATAAA	-13
PB.10260.1	chr6	+	2587	17	novel_in_catalog	UTRN	novel	354	3	NA	NA	-383	22330	combination_of_known_junctions	FALSE	canonical	1	82010	junction_1	72610.3795558872	NA	0	NA	TRUE	NA	NA	NA	B	coding	663	1989	597	2585	60.0	-17	True	NA	NA
PB.10260.3	chr6	+	8531	54	novel_not_in_catalog	UTRN	novel	354	3	NA	NA	-390	-27832	any annotated donor/acceptor	TRUE	canonical	1	18738	junction_19	77196.83414096515	NA	0	NA	TRUE	NA	NA	NA	B	coding	2642	7926	604	8529	40.0	-24	True	AAGAAA	-10
PB.10260.2	chr6	+	2255	15	novel_in_catalog	UTRN	novel	354	3	NA	NA	-404	20876	combination_of_known_junctions	FALSE	canonical	1	82010	junction_1	72439.62074862127	NA	1	NA	TRUE	NA	NA	NA	B	coding	546	1638	618	2255	55.0	-38	True	NA	NA
PB.10260.5	chr6	+	5119	35	novel_in_catalog	UTRN	novel	354	3	NA	NA	41	87641	combination_of_known_junctions	FALSE	canonical	1	75382	junction_1	65065.387086528	NA	1	NA	TRUE	NA	NA	NA	B	coding	1683	5049	70	5118	70.0	-44	True	NA	NA
PB.10260.4	chr6	+	2076	16	novel_in_catalog	UTRN	novel	354	3	NA	NA	40	22330	combination_of_known_junctions	FALSE	canonical	1	75382	junction_1	69231.35871284534	NA	0	NA	TRUE	NA	NA	NA	B	coding	668	2004	71	2074	60.0	-45	True	NA	NA
PB.10260.7	chr6	+	7961	53	novel_in_catalog	UTRN	novel	354	3	NA	NA	95	-27832	combination_of_known_junctions	FALSE	canonical	1	75382	junction_1	68489.72666080743	NA	0	NA	TRUE	NA	NA	NA	B	coding	2648	7944	16	7959	40.0	10	True	AAGAAA	-10
PB.10260.6	chr6	+	5489	38	novel_in_catalog	UTRN	novel	354	3	NA	NA	76	90489	combination_of_known_junctions	FALSE	canonical	1	75382	junction_1	69108.40542864305	NA	3	NA	TRUE	NA	NA	NA	B	coding	1818	5454	35	5488	55.0	-9	True	TTTAAA	-45
PB.6962.9	chr2	+	3881	10	full-splice_match	ABI2	ENST00000261017.9	6484	10	24	2579	22	998	multi-exon	FALSE	canonical	1	182102	junction_8	76192.51460577094	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	212	1639	60.0	0	True	NA	NA
PB.6739.2	chr2	+	3033	7	novel_in_catalog	IMP4	novel	1740	9	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	498005	junction_1	313438.0142785633	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	1156	1692	15.0	-36	True	NA	NA
PB.6739.3	chr2	+	2368	8	novel_in_catalog	IMP4	novel	1740	9	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	498005	junction_1	296673.0684776061	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	69	1028	15.0	-32	True	NA	NA
PB.6739.1	chr2	+	2247	9	full-splice_match	IMP4	ENST00000259239.7	1740	9	679	-1186	-6	0	multi-exon	FALSE	canonical	1	498005	junction_1	279446.6375258152	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	30	905	10.0	7	True	NA	NA
PB.6739.6	chr2	+	2520	6	novel_in_catalog	IMP4	novel	1740	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	498005	junction_1	319578.61564541515	NA	25	NA	TRUE	NA	NA	NA	C	coding	233	702	478	1179	15.0	-21	True	NA	NA
PB.6739.7	chr2	+	2410	8	full-splice_match	IMP4	ENST00000460766.5	2379	8	-32	1	-4	-1	multi-exon	FALSE	canonical	1	593036	junction_1	213161.4323831416	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	449	1069	15.0	-7	True	NA	NA
PB.7911.13	chr3	-	2436	4	novel_not_in_catalog	OXTR	novel	4364	4	NA	NA	-102	-1637	any annotated donor/acceptor	FALSE	canonical	1	1209	junction_3	51945.56368823895	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	335	1504	65.0	833	False	NA	NA
PB.6739.5	chr2	+	3102	6	novel_in_catalog	IMP4	novel	1740	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	498005	junction_1	338137.49590543786	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	1142	1762	15.0	-22	True	NA	NA
PB.7159.9	chr20	-	3212	1	incomplete-splice_match	RASSF2	ENST00000478553.1	5201	9	12262	8	12262	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	5173	False	AATAAA	-9
PB.7159.8	chr20	-	5338	11	novel_not_in_catalog	RASSF2	novel	5201	9	NA	NA	-20	-4	any annotated donor/acceptor	FALSE	canonical	1	850	junction_10	111284.28382768162	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	115	1095	30.0	3	True	AATAAA	-10
PB.8694.1	chr4	-	2546	13	incomplete-splice_match	ABLIM2	ENST00000505872.5	1680	18	-163	40046	-20	-11	3prime_fragment	TRUE	canonical	1	15959	junction_12	18071.724950526997	NA	0	NA	TRUE	NA	NA	NA	A	coding	458	1377	164	1540	45.0	21	False	NA	NA
PB.7159.1	chr20	-	5446	12	full-splice_match	RASSF2	ENST00000379400.7	5427	12	-10	-9	-10	9	multi-exon	FALSE	canonical	1	159435	junction_10	79682.54752007654	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	207	1187	10.0	5384	False	AATAAA	-26
PB.7159.3	chr20	-	5570	13	novel_not_in_catalog	RASSF2	novel	5201	9	NA	NA	39	-1	any annotated donor/acceptor	FALSE	canonical	1	6136	junction_11	127106.24926546033	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	344	1324	15.0	1	True	AATAAA	-13
PB.7159.2	chr20	-	5526	12	novel_not_in_catalog	RASSF2	novel	5201	9	NA	NA	140	0	any annotated donor/acceptor	FALSE	canonical	1	64854	junction_11	98622.72207745507	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	299	1279	15.0	5534	False	AATAAA	-14
PB.7159.5	chr20	-	5666	12	novel_not_in_catalog	RASSF2	novel	5201	9	NA	NA	782	-4	any annotated donor/acceptor	FALSE	canonical	1	277	junction_11	131682.441190292	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	443	1423	30.0	0	True	AATAAA	-10
PB.7159.7	chr20	-	5431	11	novel_not_in_catalog	RASSF2	novel	5201	9	NA	NA	831	-4	any annotated donor/acceptor	FALSE	canonical	1	1486	junction_10	111121.91492230505	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	208	1188	30.0	9494	False	AATAAA	-10
PB.7159.6	chr20	-	5625	13	novel_not_in_catalog	RASSF2	novel	5201	9	NA	NA	7	-4	any annotated donor/acceptor	FALSE	canonical	1	598	junction_11	130138.78714525845	NA	5	NA	TRUE	NA	NA	NA	C	coding	326	981	402	1382	30.0	-31	True	AATAAA	-10
PB.1471.1	chr10	-	3261	14	novel_not_in_catalog	PPP3CB	novel	3501	14	NA	NA	377	1	any annotated donor/acceptor	FALSE	canonical	1	5086	junction_13	183962.05226596416	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	508	1824	5.0	0	True	AATAAA	-26
PB.1471.3	chr10	-	3048	14	full-splice_match	PPP3CB	ENST00000394829.6	3149	14	100	1	72	-1	multi-exon	FALSE	canonical	1	84316	junction_13	167974.39622910554	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	36	1613	10.0	2147	False	AATAAA	-24
PB.1471.4	chr10	-	2001	10	novel_not_in_catalog	PPP3CB	novel	3501	14	NA	NA	-7028	-3	any annotated donor/acceptor	FALSE	canonical	1	14074	junction_5	205516.74089805438	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	18	1184	30.0	900	False	AATAAA	-26
PB.1471.5	chr10	-	2321	12	full-splice_match	PPP3CB	ENST00000342558.3	2418	12	87	10	87	-10	multi-exon	FALSE	canonical	1	84316	junction_11	182680.38066529346	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	21	1511	20.0	2162	False	AATAAA	-19
PB.10127.4	chr6	-	7624	42	novel_not_in_catalog	ASCC3	novel	8146	42	NA	NA	0	487	any annotated donor/acceptor	FALSE	canonical	1	9665	junction_40	72164.53884614562	NA	2	NA	TRUE	NA	NA	NA	C	coding	2207	6624	346	6969	25.0	-36	True	AATAAA	-23
PB.5959.6	chr19	+	2344	6	novel_in_catalog	ZNF420	novel	541	2	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	1	9337	junction_5	16155.038735948609	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	252	2198	15.0	11	True	NA	NA
PB.5959.5	chr19	+	3088	6	full-splice_match	ZNF420	ENST00000589461.5	537	6	16	-2567	1	-604	multi-exon	FALSE	canonical	1	1055	junction_5	24170.04206367875	NA	5	1	TRUE	NA	NA	NA	C	coding	617	1854	587	2440	70.0	1	True	TTTAAA	-39
PB.5959.4	chr19	+	3671	6	novel_in_catalog	ZNF420	novel	541	2	NA	NA	1	2	intron_retention	FALSE	canonical	1	4527	junction_5	21978.752035545604	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	560	2413	15.0	1	True	NA	NA
PB.5959.3	chr19	+	3632	5	full-splice_match	ZNF420	ENST00000337995.3	3535	5	-46	-51	1	48	multi-exon	FALSE	canonical	1	43690	junction_4	3658.844173711146	NA	1	NA	TRUE	NA	NA	NA	C	coding	688	2067	262	2328	40.0	1	True	AATAAA	-14
PB.5959.2	chr19	+	2738	2	novel_in_catalog	ZNF420	novel	541	2	NA	NA	-5	-603	no_combination_of_known_junctions	FALSE	canonical	1	2386	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	236	2089	70.0	-20	True	TTTAAA	-40
PB.5959.1	chr19	+	2978	5	full-splice_match	ZNF420	ENST00000337995.3	3535	5	-47	604	0	-603	multi-exon	FALSE	canonical	1	43690	junction_4	3658.844173711146	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	263	2329	70.0	0	True	TTTAAA	-40
PB.10951.1	chr7	+	3197	11	full-splice_match	NOM1	ENST00000275820.3	6077	11	-12	2892	-12	207	multi-exon	FALSE	canonical	1	119511	junction_7	26988.50995683163	NA	4	NA	TRUE	NA	NA	NA	C	coding	860	2583	28	2610	90.0	-23	True	NA	NA
PB.3271.4	chr13	+	2349	8	novel_in_catalog	LAMP1	novel	2699	9	NA	NA	-18	-4	no_combination_of_known_junctions	FALSE	canonical	1	16298	junction_1	946680.1384075547	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	277	1344	0.0	-16	True	AATAAA	-16
PB.1552.2	chr10	-	1355	7	full-splice_match	PDLIM1	ENST00000329399.6	1452	7	-43	140	-43	-140	multi-exon	FALSE	canonical	1	1311254	junction_4	347723.5564618426	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	153	1142	25.0	-4	True	ATTAAA	-23
PB.3271.5	chr13	+	2303	9	full-splice_match	LAMP1	ENST00000332556.4	2699	9	-14	410	-14	-168	multi-exon	FALSE	canonical	1	974835	junction_1	615498.2408047438	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	209	1462	10.0	-12	True	TATAAA	-35
PB.8007.1	chr3	-	1851	1	genic	AC112220.2	novel	NA	NA	NA	NA	-462	-3507	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-45	False	NA	NA
PB.9441.3	chr5	-	2393	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	22	3106	any annotated donor/acceptor	FALSE	canonical	1	6332	junction_1	73475.08709919557	NA	0	NA	TRUE	NA	NA	NA	B	coding	697	2094	132	2225	35.0	-5	True	TATAAA	-12
PB.729.3	chr1	-	3224	6	novel_not_in_catalog	GOLPH3L	novel	2999	5	NA	NA	-13	-5	any annotated donor/acceptor	FALSE	canonical	1	9172	junction_2	143848.49571823823	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	179	655	15.0	-4	True	AATAAA	-17
PB.11627.10	chr9	-	4010	25	novel_in_catalog	AGTPBP1	novel	4208	26	NA	NA	60	-273	combination_of_known_junctions	FALSE	canonical	1	13326	junction_21	76439.53338691781	NA	1	1	TRUE	NA	NA	NA	C	coding	1108	3327	519	3845	25.0	-44	True	AATAAA	-19
PB.9441.2	chr5	-	2563	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	27	3281	any annotated donor/acceptor	FALSE	canonical	1	6332	junction_1	73475.08709919557	NA	1	1	TRUE	NA	NA	NA	B	coding	697	2094	127	2220	65.0	0	True	AATAAA	-20
PB.3059.18	chr13	-	5348	33	novel_in_catalog	PARP4	novel	5474	34	NA	NA	28	-11	no_combination_of_known_junctions	FALSE	canonical	1	1773	junction_17	102740.00469189128	NA	1	NA	TRUE	NA	NA	NA	C	coding	1695	5088	79	5166	30.0	-5	True	AATAAA	-10
PB.3059.16	chr13	-	5314	33	novel_in_catalog	PARP4	novel	5474	34	NA	NA	16	-11	no_combination_of_known_junctions	FALSE	canonical	1	10072	junction_32	98867.8804797721	NA	0	NA	TRUE	NA	NA	NA	C	coding	1588	4767	366	5132	30.0	22	False	AATAAA	-10
PB.9441.5	chr5	-	4477	18	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	38	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78023.70941053706	NA	7	1	TRUE	NA	NA	NA	B	coding	423	1272	116	1387	20.0	11	True	AATAAA	-13
PB.3059.14	chr13	-	5344	33	novel_in_catalog	PARP4	novel	5474	34	NA	NA	51	-11	no_combination_of_known_junctions	FALSE	canonical	1	2942	junction_11	101143.91302159184	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	56	2869	30.0	18	True	AATAAA	-10
PB.3059.15	chr13	-	5308	33	novel_in_catalog	PARP4	novel	5474	34	NA	NA	17	-11	no_combination_of_known_junctions	FALSE	canonical	1	5824	junction_13	102336.28049817987	NA	4	1	TRUE	NA	NA	NA	C	coding	1678	5037	90	5126	30.0	23	False	AATAAA	-10
PB.3059.12	chr13	-	5604	34	full-splice_match	PARP4	ENST00000381989.3	5474	34	-141	11	-141	-11	multi-exon	FALSE	canonical	1	241338	junction_29	77301.06305178888	NA	1	1	TRUE	NA	NA	NA	C	coding	1724	5175	248	5422	30.0	-135	False	AATAAA	-10
PB.3059.13	chr13	-	5573	35	novel_not_in_catalog	PARP4	novel	5474	34	NA	NA	34	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	117420.83982358256	NA	2	NA	TRUE	NA	NA	NA	C	coding	1214	3645	1747	5391	30.0	1	True	AATAAA	-10
PB.3059.10	chr13	-	3276	18	novel_not_in_catalog	PARP4	novel	5474	34	NA	NA	12	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	122815.04823109797	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	161	3094	30.0	18	False	AATAAA	-10
PB.9441.7	chr5	-	3228	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	36	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	67334.74576776373	NA	2	1	TRUE	NA	NA	NA	B	coding	423	1272	118	1389	25.0	9	True	AATAAA	-13
PB.9441.6	chr5	-	2189	8	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	6	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	65076.57899234516	NA	2	1	TRUE	NA	NA	NA	B	coding	319	960	148	1107	20.0	-21	True	AATAAA	-12
PB.11358.4	chr8	+	5272	21	novel_in_catalog	DENND3	novel	560	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	22140	junction_3	64984.64932382109	NA	7	NA	TRUE	NA	NA	NA	C	coding	1200	3603	107	3709	35.0	13	True	AATAAA	-9
PB.9441.9	chr5	-	2482	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	-22	170	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	67334.74576776373	NA	1	1	TRUE	NA	NA	NA	B	coding	423	1272	23	1294	80.0	104	False	NA	NA
PB.9441.8	chr5	-	3025	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	13	-227	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	67334.74576776373	NA	5	1	TRUE	NA	NA	NA	B	coding	423	1272	141	1412	10.0	-14	True	TATAAA	-43
PB.814.1	chr1	-	1076	6	full-splice_match	SSR2	ENST00000295702.8	1116	6	35	5	4	-4	multi-exon	FALSE	canonical	1	2798793	junction_5	576720.2690346161	NA	0	NA	TRUE	NA	NA	NA	A	coding	183	552	38	589	10.0	8	True	AATAAA	-13
PB.6327.6	chr2	+	5767	14	novel_in_catalog	GEN1	novel	9854	14	NA	NA	-27	-644	combination_of_known_junctions	FALSE	canonical	1	2156	junction_1	33257.2325728159	NA	3	NA	TRUE	NA	NA	NA	C	coding	908	2727	259	2985	15.0	-30	True	AAAAAG	-18
PB.7688.14	chr22	-	3011	20	novel_in_catalog	THOC5	novel	4753	20	NA	NA	2	0	intron_retention	FALSE	canonical	1	65810	junction_12	111784.08949834976	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	1653	2885	10.0	-31	True	ATTAAA	-12
PB.7845.4	chr22	-	3459	4	full-splice_match	MCAT	ENST00000290429.10	2056	4	3	-1406	3	1406	multi-exon	FALSE	canonical	1	170610	junction_1	35649.41464690082	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	44	1216	70.0	-4	True	NA	NA
PB.7688.12	chr22	-	2243	20	full-splice_match	THOC5	ENST00000490103.5	4753	20	59	2451	18	-1	multi-exon	FALSE	canonical	1	186424	junction_19	86315.0694493717	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	65	2116	10.0	-15	True	ATTAAA	-13
PB.7688.10	chr22	-	2396	21	full-splice_match	THOC5	ENST00000397873.6	2374	21	6	-28	6	-1	multi-exon	FALSE	canonical	1	102437	junction_20	108853.91042166331	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	218	2269	10.0	-52	True	ATTAAA	-13
PB.7688.11	chr22	-	2286	21	novel_in_catalog	THOC5	novel	4753	20	NA	NA	8	-1	intron_retention	FALSE	canonical	1	65810	junction_12	128703.65069612439	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	75	2159	10.0	-25	True	ATTAAA	-13
PB.7845.3	chr22	-	3492	4	novel_not_in_catalog	MCAT	novel	2056	4	NA	NA	4	1406	any annotated donor/acceptor	FALSE	canonical	1	8884	junction_3	77101.14799981183	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	572	1249	70.0	-3	True	NA	NA
PB.11627.12	chr9	-	3870	25	novel_in_catalog	AGTPBP1	novel	4208	26	NA	NA	-62	-274	combination_of_known_junctions	FALSE	canonical	1	13326	junction_21	80860.29596311811	NA	3	2	TRUE	NA	NA	NA	C	coding	1068	3207	500	3706	25.0	-25	True	AATAAA	-18
PB.7845.2	chr22	-	3383	3	full-splice_match	MCAT	ENST00000327555.5	1134	3	-14	-2235	-14	1561	multi-exon	FALSE	canonical	1	98564	junction_1	74703.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	180	543	31	573	85.0	9	True	NA	NA
PB.8734.20	chr4	-	3368	4	novel_not_in_catalog	TLR10	novel	3958	4	NA	NA	0	-29	any annotated donor/acceptor	FALSE	canonical	1	1716	junction_3	14144.157576736607	NA	3	NA	TRUE	NA	NA	NA	C	coding	797	2394	462	2855	95.0	-1	True	NA	NA
PB.8292.2	chr3	-	3220	6	full-splice_match	GCSAM	ENST00000484193.5	1036	6	76	-2260	-12	5	multi-exon	FALSE	canonical	1	24843	junction_5	87844.31368415375	NA	2	NA	TRUE	NA	NA	NA	C	coding	180	543	59	601	30.0	-1	True	AATAAA	-22
PB.8292.4	chr3	-	3689	5	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	97	-4	combination_of_known_junctions	FALSE	canonical	1	9587	junction_1	94556.51132127285	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	766	1107	35.0	217	False	AATAAA	-13
PB.8292.5	chr3	-	3549	7	full-splice_match	GCSAM	ENST00000487901.1	809	7	22	-2762	3	-4	multi-exon	FALSE	canonical	1	17469	junction_6	103306.5007109373	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	454	939	35.0	-3	True	AATAAA	-13
PB.8292.6	chr3	-	3455	6	full-splice_match	GCSAM	ENST00000470085.5	1072	6	-3	-2380	-3	-4	multi-exon	FALSE	canonical	1	29832	junction_4	85877.4653389351	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	507	845	35.0	-16	True	AATAAA	-13
PB.8734.21	chr4	-	3079	2	full-splice_match	TLR10	ENST00000361424.6	3484	2	2	403	1	-29	multi-exon	FALSE	canonical	1	21404	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	173	2566	95.0	1	True	NA	NA
PB.8292.8	chr3	-	5658	5	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	3	-4	intron_retention	FALSE	canonical	1	196010	junction_4	29487.366642343633	NA	2	1	TRUE	NA	NA	NA	C	coding	112	339	2710	3048	35.0	-3	True	AATAAA	-13
PB.8292.9	chr3	-	3201	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	40	95	5	-95	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	146	682	75.0	-20	True	NA	NA
PB.8485.7	chr3	-	2401	6	novel_not_in_catalog	SSR3	novel	3716	5	NA	NA	3	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	449531.30164801655	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	58	615	30.0	4	True	ATTAAA	-11
PB.8734.22	chr4	-	3270	3	full-splice_match	TLR10	ENST00000622002.4	3673	3	0	403	0	-29	multi-exon	FALSE	canonical	1	3351	junction_2	14027.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	364	2757	95.0	-1	True	NA	NA
PB.1646.1	chr10	-	3250	6	full-splice_match	SMNDC1	ENST00000369603.9	4341	6	14	1077	1	-1077	multi-exon	FALSE	canonical	1	148723	junction_5	174920.38222688632	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	191	907	40.0	-18	True	AATAAA	-17
PB.1646.2	chr10	-	1998	6	full-splice_match	SMNDC1	ENST00000369603.9	4341	6	32	2311	-13	1021	multi-exon	FALSE	canonical	1	148723	junction_5	174920.38222688632	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	173	889	35.0	0	True	AATAAA	-18
PB.1646.3	chr10	-	3000	5	novel_in_catalog	SMNDC1	novel	4341	6	NA	NA	-52	1020	intron_retention	FALSE	canonical	1	148723	junction_4	175658.0722220018	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	1593	1892	35.0	-84	False	AATAAA	-17
PB.1646.4	chr10	-	7637	4	novel_in_catalog	SMNDC1	novel	4341	6	NA	NA	-12	1020	intron_retention	FALSE	canonical	1	148723	junction_3	192882.71421658178	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	6230	6529	35.0	-44	True	AATAAA	-17
PB.1646.5	chr10	-	1765	6	full-splice_match	SMNDC1	ENST00000369603.9	4341	6	16	2560	3	772	multi-exon	FALSE	canonical	1	148723	junction_5	174920.38222688632	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	189	905	35.0	-16	True	ATTAAA	-22
PB.7044.1	chr2	-	2684	16	full-splice_match	CUL3	ENST00000264414.8	6741	16	261	3796	261	-7	multi-exon	TRUE	canonical	1	405788	junction_15	245717.7457269395	NA	0	NA	TRUE	NA	NA	NA	A	coding	768	2307	79	2385	50.0	459	False	AATAAA	-13
PB.10703.1	chr7	-	1223	3	novel_in_catalog	ZNF394	novel	528	2	NA	NA	9	0	intron_retention	FALSE	canonical	1	18690	junction_1	98332.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	196	801	10.0	-8	True	NA	NA
PB.8734.24	chr4	-	3191	4	full-splice_match	TLR10	ENST00000308973.8	3958	4	-32	799	0	87	multi-exon	FALSE	canonical	1	22860	junction_3	4182.1645379184	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	681	3074	35.0	-1	True	NA	NA
PB.10703.3	chr7	-	2050	2	full-splice_match	ZNF394	ENST00000426306.2	2017	2	-33	0	0	0	multi-exon	FALSE	canonical	1	25703	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	699	1763	10.0	-17	True	NA	NA
PB.10703.2	chr7	-	2182	3	full-splice_match	ZNF394	ENST00000337673.6	2179	3	0	-3	0	3	multi-exon	FALSE	canonical	1	125843	junction_1	44756.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	205	1890	10.0	-17	True	NA	NA
PB.10703.5	chr7	-	1842	2	full-splice_match	ZNF394	ENST00000426306.2	2017	2	-20	195	-9	-195	multi-exon	FALSE	canonical	1	25703	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	686	1750	60.0	-4	True	NA	NA
PB.10703.4	chr7	-	1973	3	full-splice_match	ZNF394	ENST00000337673.6	2179	3	9	197	9	-195	multi-exon	FALSE	canonical	1	125843	junction_1	44756.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	196	1881	60.0	-8	True	NA	NA
PB.8734.25	chr4	-	2998	3	full-splice_match	TLR10	ENST00000613579.4	3801	3	4	799	3	87	multi-exon	FALSE	canonical	1	10557	junction_1	6151.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	488	2881	35.0	3	True	NA	NA
PB.7887.1	chr22	+	3494	25	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	15233	junction_2	158251.99218488333	NA	1	NA	TRUE	NA	NA	NA	C	coding	959	2880	472	3351	15.0	-22	True	AATAAA	-32
PB.9028.2	chr4	+	2582	1	full-splice_match	MIR4453HG	ENST00000604157.1	3000	1	408	10	408	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	294	False	NA	NA
PB.2647.14	chr12	-	1505	1	novel_in_catalog	CBX5	novel	2627	2	NA	NA	-15	-6772	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	4	True	AATAAA	-24
PB.7887.2	chr22	+	3508	25	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	6	-3	any annotated donor/acceptor	FALSE	canonical	1	394	junction_22	162940.5090458578	NA	3	NA	TRUE	NA	NA	NA	C	coding	897	2694	389	3082	20.0	-17	True	AATAAA	-29
PB.2647.12	chr12	-	2825	6	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	3	3358	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242111.00549706534	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	166	741	5.0	-9	True	AGTAAA	-14
PB.2647.13	chr12	-	2521	2	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	-21	-95	any annotated donor/acceptor	FALSE	canonical	1	35520	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	43	132	250	381	50.0	-33	False	AATAAA	-16
PB.2647.10	chr12	-	6241	5	full-splice_match	CBX5	ENST00000209875.8	11528	5	-19	5306	12	4379	multi-exon	FALSE	canonical	1	441839	junction_4	103769.68480004168	NA	3	2	TRUE	NA	NA	NA	C	coding	191	576	157	732	60.0	0	True	NA	NA
PB.2647.11	chr12	-	5232	5	full-splice_match	CBX5	ENST00000209875.8	11528	5	-30	6326	1	3359	multi-exon	FALSE	canonical	1	441839	junction_4	103769.68480004168	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	168	743	5.0	-11	True	AGTAAA	-15
PB.7887.9	chr22	+	3592	27	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	193480.60122433509	NA	7	1	TRUE	NA	NA	NA	C	coding	981	2946	504	3449	15.0	-7	True	AATAAA	-32
PB.3042.1	chr13	-	2229	2	full-splice_match	GJB2	ENST00000382848.5	2290	2	0	61	0	-61	multi-exon	FALSE	canonical	1	188308	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	179	859	45.0	-1	True	AATAAA	-28
PB.3042.2	chr13	-	1959	2	full-splice_match	GJB2	ENST00000382848.5	2290	2	0	331	0	-331	multi-exon	FALSE	canonical	1	188308	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	179	859	20.0	-1	True	ATTAAA	-21
PB.995.21	chr1	-	3130	16	full-splice_match	IVNS1ABP	ENST00000459929.5	3657	16	8	519	8	237	multi-exon	FALSE	canonical	1	101344	junction_8	412805.49858111143	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	1355	2629	35.0	587	False	ATTAAA	-21
PB.1234.4	chr1	-	7004	20	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_16	142857.5388095435	NA	2	NA	TRUE	NA	NA	NA	B	coding	1548	4647	338	4984	35.0	-3	True	AATAAA	-17
PB.5005.11	chr17	-	1968	11	novel_in_catalog	BECN1	novel	2112	12	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	1	53506	junction_1	270265.53964751033	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	141	1208	30.0	10	True	AATAAA	-17
PB.5005.10	chr17	-	2203	13	novel_in_catalog	BECN1	novel	2112	12	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	12764	junction_5	306143.8801203429	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	130	1584	30.0	-1	True	AATAAA	-18
PB.5005.13	chr17	-	1622	12	full-splice_match	BECN1	ENST00000361523.8	2112	12	-26	516	-2	20	multi-exon	FALSE	canonical	1	211102	junction_11	195586.51130580774	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	160	1512	75.0	-9	True	ATTAAA	-37
PB.5005.12	chr17	-	1602	12	full-splice_match	BECN1	ENST00000590099.5	2087	12	-28	513	-4	20	multi-exon	FALSE	canonical	1	370275	junction_11	161299.29641308225	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	140	1492	75.0	-11	True	ATTAAA	-37
PB.5005.14	chr17	-	1480	9	incomplete-splice_match	BECN1	ENST00000361523.8	2112	12	-20	4043	-1	-9	3prime_fragment	FALSE	canonical	1	211102	junction_8	209440.87286615642	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	154	1137	55.0	-3	True	NA	NA
PB.1630.7	chr10	-	3243	16	novel_in_catalog	NT5C2	novel	3365	17	NA	NA	-3	-21	no_combination_of_known_junctions	FALSE	canonical	1	9479	junction_12	251651.1609991012	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	498	1610	35.0	-30	True	AATAAA	-14
PB.1630.6	chr10	-	3492	19	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	2	-5	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_18	206284.3188589746	NA	2	NA	TRUE	NA	NA	NA	C	coding	561	1686	158	1843	30.0	1	True	AATAAA	-30
PB.1630.5	chr10	-	3309	17	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	2010	junction_9	247903.548727373	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	686	1657	30.0	-1	True	AATAAA	-33
PB.2402.8	chr12	-	2497	3	full-splice_match	C12orf4	ENST00000535030.1	561	3	1	-1937	1	1937	multi-exon	FALSE	canonical	1	102163	junction_2	8249.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	125	460	95.0	-42	True	NA	NA
PB.1630.3	chr10	-	3584	19	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_18	198585.99803487197	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	245	1930	25.0	3948	False	AATAAA	-35
PB.1630.2	chr10	-	3563	20	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_19	231447.98713760695	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	199	1908	20.0	3948	False	AATAAA	-36
PB.1630.1	chr10	-	4245	18	full-splice_match	NT5C2	ENST00000343289.9	3435	18	34	-844	0	843	multi-exon	FALSE	canonical	1	38249	junction_17	184103.9186595985	NA	4	NA	TRUE	NA	NA	NA	C	coding	561	1686	62	1747	95.0	-1	True	NA	NA
PB.8309.2	chr3	+	3637	9	novel_in_catalog	QTRT2	novel	680	5	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	10224	junction_2	52922.9218957568	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	208	1197	30.0	-24	True	AATAAA	-15
PB.2402.3	chr12	-	3375	11	novel_in_catalog	C12orf4	novel	3826	14	NA	NA	10	-40	no_combination_of_known_junctions	FALSE	canonical	1	11621	junction_5	57788.158893409985	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	112	867	80.0	-29	True	NA	NA
PB.2402.2	chr12	-	3696	13	novel_in_catalog	C12orf4	novel	3826	14	NA	NA	-2	-40	no_combination_of_known_junctions	FALSE	canonical	1	6570	junction_5	53981.15899314367	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	128	1657	80.0	-45	True	NA	NA
PB.2402.1	chr12	-	3784	14	full-splice_match	C12orf4	ENST00000261250.7	3826	14	2	40	2	-40	multi-exon	FALSE	canonical	1	102163	junction_13	33451.53123426729	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	87	1745	80.0	-4	True	NA	NA
PB.569.3	chr1	-	2983	6	novel_not_in_catalog	EXTL2	novel	3146	4	NA	NA	36	-1	any annotated donor/acceptor	FALSE	canonical	1	4771	junction_5	71818.62165873137	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	440	1429	25.0	14	True	AATAAA	-18
PB.2402.6	chr12	-	2849	5	novel_not_in_catalog	C12orf4	novel	3826	14	NA	NA	3	-1759	any annotated donor/acceptor	FALSE	canonical	1	1472	junction_1	51322.19669097865	NA	11	NA	TRUE	NA	NA	NA	C	coding	169	510	119	628	15.0	-36	True	AATAAA	-16
PB.2402.5	chr12	-	1991	14	full-splice_match	C12orf4	ENST00000261250.7	3826	14	-30	1865	3	-178	multi-exon	FALSE	canonical	1	102163	junction_13	33451.53123426729	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	119	1777	10.0	-36	True	NA	NA
PB.2402.4	chr12	-	2164	14	full-splice_match	C12orf4	ENST00000261250.7	3826	14	-33	1695	0	-8	multi-exon	FALSE	canonical	1	102163	junction_13	33451.53123426729	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	122	1780	40.0	-39	True	ATTAAA	-6
PB.12154.28	chrX	-	1371	8	incomplete-splice_match	ATRX	ENST00000395603.7	10218	34	-2	178275	-2	-481	3prime_fragment	FALSE	canonical	1	37413	junction_3	88961.08634013147	NA	1	1	TRUE	NA	NA	NA	C	coding	384	1152	218	1369	70.0	-3	True	NA	NA
PB.11248.2	chr8	+	1658	2	full-splice_match	PLEKHF2	ENST00000315367.3	2881	2	111	1112	111	654	multi-exon	FALSE	canonical	1	120310	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	131	880	30.0	0	True	AATAAA	-13
PB.12154.20	chrX	-	2747	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-7	177853	2	-426	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2523	223	2745	50.0	-8	True	AAAAAG	-7
PB.12154.21	chrX	-	2918	9	novel_in_catalog	ATRX	novel	11167	35	NA	NA	-1	-383	intron_retention	FALSE	canonical	1	23378	junction_8	106876.47538981626	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2448	471	2918	60.0	-2	True	AATACA	-37
PB.12154.22	chrX	-	2617	8	novel_in_catalog	ATRX	novel	11167	35	NA	NA	1	-440	intron_retention	FALSE	canonical	1	35698	junction_3	89478.02854788613	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2394	224	2617	65.0	-9	True	NA	NA
PB.12154.23	chrX	-	2640	10	full-splice_match	ATRX	ENST00000624032.3	3071	10	-9	440	-1	-440	multi-exon	FALSE	canonical	1	39846	junction_1	83146.069610381	NA	1	1	TRUE	NA	NA	NA	C	coding	808	2424	217	2640	65.0	-2	True	NA	NA
PB.12154.24	chrX	-	2635	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-8	177966	1	-539	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	1	1	TRUE	NA	NA	NA	C	coding	804	2412	224	2635	65.0	-9	True	AAAAAG	-31
PB.12154.25	chrX	-	2516	8	incomplete-splice_match	ATRX	ENST00000395603.7	10218	34	-3	177131	1	-539	3prime_fragment	FALSE	canonical	1	37413	junction_3	88961.08634013147	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2298	219	2516	65.0	-4	True	AAAAAG	-31
PB.12154.26	chrX	-	2546	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-1	178048	-1	581	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	217	2544	65.0	-2	True	TTTAAA	-28
PB.12154.27	chrX	-	2440	10	full-splice_match	ATRX	ENST00000624032.3	3071	10	3	628	-1	574	multi-exon	FALSE	canonical	1	39846	junction_1	83146.069610381	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2235	205	2439	65.0	10	True	TTTAAA	-21
PB.56.1	chr1	+	2302	11	novel_in_catalog	ZBTB48	novel	1050	3	NA	NA	-29	-1	combination_of_known_junctions	TRUE	canonical	1	38715	junction_1	82224.59258768024	NA	4	NA	TRUE	NA	NA	NA	C	coding	688	2067	169	2235	20.0	-84	False	AATAAA	-23
PB.6110.1	chr19	+	1501	13	full-splice_match	NOP53	ENST00000246802.9	1528	13	26	1	-3	0	multi-exon	TRUE	canonical	1	698192	junction_6	807604.035610424	NA	0	NA	TRUE	NA	NA	NA	A	coding	478	1437	13	1449	15.0	2	True	AATAAA	-17
PB.5007.10	chr17	+	2749	6	novel_not_in_catalog	RUNDC1	novel	3828	5	NA	NA	1	-722	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	92626.46919882027	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	12	1853	40.0	1	True	AGTAAA	-21
PB.8309.5	chr3	+	4004	9	full-splice_match	QTRT2	ENST00000485050.5	3844	9	35	-195	-12	122	multi-exon	FALSE	canonical	1	90568	junction_1	33793.39348434099	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	117	1364	25.0	-12	True	AAAAAG	-34
PB.11457.1	chr9	+	2712	2	full-splice_match	LURAP1L	ENST00000319264.3	1753	2	-30	-929	-30	929	multi-exon	FALSE	canonical	1	95404	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	726	1412	15.0	1	True	ATTAAA	-16
PB.7111.20	chr2	-	4371	28	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-43	-3	combination_of_known_junctions	FALSE	canonical	1	56549	junction_21	965023.9435985665	NA	0	NA	TRUE	NA	NA	NA	C	coding	1245	3738	248	3985	15.0	-22	True	AATAAA	-23
PB.7111.22	chr2	-	4187	26	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	2866	junction_17	980469.4449616624	NA	6	2	TRUE	NA	NA	NA	C	coding	765	2298	1504	3801	15.0	-3	True	AATAAA	-23
PB.9560.13	chr5	+	4161	23	incomplete-splice_match	TCOF1	ENST00000445265.6	4825	26	35	3449	-3	-1586	3prime_fragment	FALSE	canonical	1	62570	junction_6	128568.9218257023	NA	0	NA	TRUE	NA	NA	NA	B	coding	1371	4113	47	4159	15.0	-3	True	AAGAAA	-12
PB.9560.12	chr5	+	3870	21	novel_in_catalog	TCOF1	novel	4194	23	NA	NA	-6	-1586	no_combination_of_known_junctions	FALSE	canonical	1	39625	junction_14	159049.05226076485	NA	0	NA	TRUE	NA	NA	NA	B	coding	1273	3819	50	3868	15.0	-6	True	AAGAAA	-12
PB.9560.11	chr5	+	4215	23	novel_in_catalog	TCOF1	novel	4194	23	NA	NA	-6	-1586	no_combination_of_known_junctions	FALSE	canonical	1	39625	junction_15	130033.03714283092	NA	0	NA	TRUE	NA	NA	NA	B	coding	1388	4164	50	4213	15.0	-6	True	AAGAAA	-12
PB.9560.10	chr5	+	4102	22	novel_in_catalog	TCOF1	novel	4194	23	NA	NA	-7	-1586	no_combination_of_known_junctions	TRUE	canonical	1	39625	junction_15	143898.4348866271	NA	0	NA	TRUE	NA	NA	NA	B	coding	1350	4050	51	4100	15.0	-7	True	AAGAAA	-12
PB.7897.2	chr22	-	1482	11	full-splice_match	CHKB	ENST00000406938.2	1638	11	141	15	-4	-1	multi-exon	FALSE	canonical	1	108638	junction_10	216112.42381337078	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	78	1265	5.0	-10	True	AATAAA	-17
PB.7897.1	chr22	-	1864	10	full-splice_match	CHKB	ENST00000481673.5	1856	10	-3	-5	-3	1	multi-exon	FALSE	canonical	1	108638	junction_9	195310.91414713016	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	817	1641	10.0	0	True	AATAAA	-23
PB.11283.3	chr8	-	3007	3	novel_in_catalog	KLF10	novel	3097	4	NA	NA	186	1	intron_retention	FALSE	canonical	1	384119	junction_2	128488.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	545	1660	30.0	6	True	AATAAA	-15
PB.6327.1	chr2	+	4755	1	full-splice_match	GEN1	ENST00000614478.1	1864	1	204	-3095	-48	-2661	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.1088.4	chr1	+	4180	13	incomplete-splice_match	CR2	ENST00000367058.7	4063	19	99	13128	99	4795	intron_retention	FALSE	canonical	1	47041	junction_1	25045.31909844743	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	91	2691	30.0	1	True	AATAAA	-17
PB.1240.29	chr1	-	2806	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	15	28	any annotated donor/acceptor	TRUE	canonical	0	0	junction_14	1904400.8788093852	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	477	2018	30.0	9	True	ATTAAA	-12
PB.6940.2	chr2	-	4321	18	full-splice_match	ORC2	ENST00000234296.6	4312	18	-14	5	-14	-5	multi-exon	FALSE	canonical	1	153047	junction_7	39296.53346298643	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	265	1998	25.0	6	False	AATAAA	-30
PB.2757.2	chr12	+	3341	11	full-splice_match	RAB3IP	ENST00000247833.11	3690	11	179	170	-2	26	multi-exon	FALSE	canonical	1	93419	junction_1	47168.97171541902	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	198	1580	55.0	-37	True	AATAAA	-11
PB.2757.3	chr12	+	3123	4	incomplete-splice_match	RAB3IP	ENST00000378815.10	2386	6	-2	9512	-2	2119	3prime_fragment	FALSE	canonical	1	93419	junction_1	63973.47804798138	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	198	842	25.0	-37	True	AATAAA	-13
PB.11734.1	chr9	+	4716	5	full-splice_match	SLC31A1	ENST00000374212.4	4744	5	-10	38	-10	-38	multi-exon	FALSE	canonical	1	119935	junction_4	61334.579604412385	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	163	735	75.0	-36	True	NA	NA
PB.2757.1	chr12	+	3532	11	full-splice_match	RAB3IP	ENST00000247833.11	3690	11	151	7	-30	-7	multi-exon	FALSE	canonical	1	93419	junction_1	47168.97171541902	NA	2	NA	TRUE	NA	NA	NA	C	coding	460	1383	226	1608	50.0	-854	False	ATTAAA	-10
PB.2757.6	chr12	+	2929	4	incomplete-splice_match	RAB3IP	ENST00000378815.10	2386	6	-1	9705	-1	1926	3prime_fragment	FALSE	canonical	1	93419	junction_1	63973.47804798138	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	197	841	40.0	-36	True	ATTAAA	-17
PB.2757.7	chr12	+	2028	11	novel_not_in_catalog	RAB3IP	novel	3690	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1717	junction_6	76202.19922259463	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	197	1144	80.0	-36	True	NA	NA
PB.2757.4	chr12	+	1859	11	full-splice_match	RAB3IP	ENST00000247833.11	3690	11	182	1649	1	3	multi-exon	FALSE	canonical	1	93419	junction_1	47168.97171541902	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	195	1577	15.0	-34	True	AATAAA	-20
PB.2757.5	chr12	+	3228	11	full-splice_match	RAB3IP	ENST00000247833.11	3690	11	180	282	-1	-22	multi-exon	FALSE	canonical	1	93419	junction_1	47168.97171541902	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	197	1579	75.0	-36	True	NA	NA
PB.8637.13	chr3	+	3315	9	full-splice_match	FYTTD1	ENST00000424384.2	1758	9	360	-1917	360	1917	multi-exon	FALSE	canonical	1	10279	junction_1	196873.60707630258	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	172	927	30.0	0	True	AATAAA	-20
PB.2757.8	chr12	+	1756	10	full-splice_match	RAB3IP	ENST00000483530.6	1755	10	-1	0	-1	0	multi-exon	FALSE	canonical	1	10776	junction_8	77430.2687957221	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	197	1384	20.0	-36	True	AATAAA	-15
PB.2757.9	chr12	+	1720	6	full-splice_match	RAB3IP	ENST00000378815.10	2386	6	8	658	8	-658	multi-exon	FALSE	canonical	1	93419	junction_1	60831.70845669222	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	188	1135	65.0	-27	True	NA	NA
PB.230.5	chr1	+	2440	10	full-splice_match	GMEB1	ENST00000373816.5	6410	10	60	3910	12	378	multi-exon	FALSE	canonical	1	37519	junction_1	33401.79841724353	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	79	1770	50.0	8	True	NA	NA
PB.8428.18	chr3	-	2766	14	novel_not_in_catalog	PIK3CB	novel	5919	22	NA	NA	0	-13720	any annotated donor/acceptor	FALSE	canonical	1	6369	junction_1	58839.1071863366	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	363	2159	20.0	-30	True	NA	NA
PB.8637.12	chr3	+	3378	9	novel_in_catalog	FYTTD1	novel	718	7	NA	NA	59	1932	combination_of_known_junctions	FALSE	canonical	1	843	junction_1	199813.67790671732	NA	2	NA	TRUE	NA	NA	NA	C	coding	251	756	220	975	25.0	-524	False	AATAAA	-35
PB.3724.26	chr15	+	2449	7	full-splice_match	NIPA2	ENST00000398014.6	3130	7	28	653	-7	15	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	360	1083	483	1565	40.0	-20	True	AATAAA	-24
PB.3724.27	chr15	+	2786	8	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-5	206	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	360	1083	629	1711	25.0	-18	True	NA	NA
PB.3724.24	chr15	+	2126	8	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-3	370	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	360	1083	605	1687	25.0	6	True	AATACA	-24
PB.3724.25	chr15	+	2400	7	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	8	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	446	1528	35.0	-21	True	AATAAA	-12
PB.3724.22	chr15	+	1988	6	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-2	-331	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	368	1450	70.0	-15	True	AATGAA	-17
PB.3724.23	chr15	+	3229	8	full-splice_match	NIPA2	ENST00000337451.7	3233	8	7	-3	7	3	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	607	1689	20.0	-22	True	AATAAA	-24
PB.3724.20	chr15	+	1856	6	full-splice_match	NIPA2	ENST00000398013.7	2280	6	-4	428	-4	372	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	333	1415	20.0	-6	True	AATACA	-26
PB.3724.21	chr15	+	3456	10	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	5	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	834	1916	20.0	-24	True	AATAAA	-24
PB.11006.1	chr8	+	3203	10	full-splice_match	LPL	ENST00000650287.1	3565	10	-41	403	-41	-340	multi-exon	FALSE	canonical	1	304524	junction_5	90525.27406322624	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	230	1657	15.0	-9034	False	AATAAA	-17
PB.11006.2	chr8	+	2461	10	full-splice_match	LPL	ENST00000650287.1	3565	10	-32	1136	-32	-1073	multi-exon	FALSE	canonical	1	304524	junction_5	90525.27406322624	NA	6	NA	TRUE	NA	NA	NA	C	coding	475	1428	221	1648	75.0	-9025	False	NA	NA
PB.8637.10	chr3	+	3381	9	full-splice_match	FYTTD1	ENST00000241502.8	6866	9	185	3300	-3	1916	multi-exon	FALSE	canonical	1	460748	junction_1	75768.27768103218	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	38	994	30.0	49	True	AATAAA	-19
PB.3724.28	chr15	+	2224	9	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	-5	372	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	701	1783	20.0	-18	True	AATACA	-26
PB.3724.29	chr15	+	3357	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-3	6	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	732	1814	25.0	-16	True	AATAAA	-27
PB.746.3	chr1	-	3905	11	full-splice_match	PI4KB	ENST00000368874.8	3934	11	21	8	21	-8	multi-exon	FALSE	canonical	1	172621	junction_10	146482.545445012	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	453	2858	5.0	4	True	AATAAA	-12
PB.746.2	chr1	-	4129	12	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	105423	junction_11	186876.24209204948	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	671	3076	0.0	-12	True	AATAAA	-18
PB.746.1	chr1	-	4025	13	full-splice_match	PI4KB	ENST00000368872.5	3331	13	-11	-683	-11	1	multi-exon	FALSE	canonical	1	57828	junction_11	221119.4949672135	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	564	2969	0.0	-31	True	AATAAA	-21
PB.746.7	chr1	-	3310	11	full-splice_match	PI4KB	ENST00000368874.8	3934	11	289	335	-7	0	multi-exon	FALSE	canonical	1	172621	junction_10	146482.545445012	NA	20	1	TRUE	NA	NA	NA	C	coding	801	2406	185	2590	15.0	-27	True	AATAAA	-15
PB.4700.1	chr17	-	1613	5	full-splice_match	ZNF232	ENST00000573015.5	1553	5	-25	-35	-25	-3	multi-exon	FALSE	canonical	1	41828	junction_3	11042.562949786612	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	274	1527	15.0	5	True	CATAAA	-16
PB.4700.2	chr17	-	1953	4	incomplete-splice_match	ZNF232	ENST00000570486.5	2384	5	11247	-191	-24	-3	5prime_fragment	FALSE	canonical	1	41828	junction_2	7872.95128906562	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	273	851	15.0	6	True	CATAAA	-16
PB.746.4	chr1	-	4115	13	full-splice_match	PI4KB	ENST00000368875.6	3983	13	0	-132	0	-8	multi-exon	FALSE	canonical	1	98163	junction_9	226509.90836034023	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	618	3068	5.0	11	True	AATAAA	-12
PB.1155.8	chr1	-	3791	14	novel_not_in_catalog	LBR	novel	3745	14	NA	NA	-77	0	any annotated donor/acceptor	FALSE	canonical	1	248	junction_7	229568.27443080212	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	174	1991	10.0	2	True	AATAAA	-20
PB.746.9	chr1	-	4584	10	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	172621	junction_9	148936.96041050722	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	475	2769	15.0	-18	True	AATAAA	-15
PB.746.8	chr1	-	3559	13	full-splice_match	PI4KB	ENST00000368875.6	3983	13	231	193	-7	2	multi-exon	FALSE	canonical	1	98163	junction_9	226509.90836034023	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	387	2837	10.0	-27	True	AATAAA	-17
PB.5641.3	chr19	-	2157	12	novel_in_catalog	AC011499.1	novel	581	3	NA	NA	-5560	-1139	intron_retention	FALSE	canonical	1	212200	junction_4	43804.85126366034	NA	2	NA	TRUE	NA	NA	NA	B	coding	701	2106	39	2144	25.0	-17	True	AATAAA	-13
PB.5641.2	chr19	-	2126	13	novel_in_catalog	AC011499.1	novel	581	3	NA	NA	-5562	-1139	no_combination_of_known_junctions	FALSE	canonical	1	49533	junction_5	79331.06936278532	NA	1	NA	TRUE	NA	NA	NA	B	coding	500	1503	41	1543	25.0	-19	True	AATAAA	-13
PB.5641.1	chr19	-	2050	13	full-splice_match	DUS3L	ENST00000309061.11	2113	13	66	-3	34	3	multi-exon	FALSE	canonical	1	212200	junction_5	43599.1317274655	NA	0	NA	TRUE	NA	NA	NA	A	coding	650	1953	32	1984	15.0	-10	True	AATAAA	-20
PB.5113.9	chr17	+	2990	13	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-5	0	intron_retention	FALSE	canonical	1	15395	junction_5	187477.10842502804	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	718	1479	20.0	1	True	AATAAA	-20
PB.5113.8	chr17	+	2631	17	full-splice_match	SPATA20	ENST00000006658.10	2719	17	85	3	-6	-1	multi-exon	FALSE	canonical	1	79433	junction_1	129320.14537983824	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	36	2444	20.0	0	True	AATAAA	-19
PB.5113.1	chr17	+	2545	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-2	0	intron_retention	FALSE	canonical	1	15395	junction_6	170164.3356059197	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	996	2357	20.0	-23	True	AATAAA	-20
PB.5113.3	chr17	+	2989	16	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	1	1	intron_retention	FALSE	canonical	1	105761	junction_1	127993.7034914869	NA	1	1	TRUE	NA	NA	NA	C	coding	455	1368	496	1863	15.0	-12	True	AATAAA	-21
PB.5113.2	chr17	+	2913	17	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	8645	junction_2	178638.15628172603	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1653	2726	20.0	-16	True	AATAAA	-19
PB.5113.5	chr17	+	3375	12	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	3	0	intron_retention	FALSE	canonical	1	24975	junction_1	151239.25113136752	NA	2	NA	TRUE	NA	NA	NA	C	coding	402	1209	46	1254	20.0	-10	True	AATAAA	-20
PB.5113.4	chr17	+	2791	16	incomplete-splice_match	SPATA20	ENST00000504334.5	3539	18	4104	0	1	0	5prime_fragment	FALSE	canonical	1	105761	junction_1	127651.17532285658	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1530	2603	20.0	-12	True	AATAAA	-20
PB.5113.7	chr17	+	3240	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	79433	junction_1	136940.26516408235	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	36	1730	20.0	0	True	AATAAA	-19
PB.5113.6	chr17	+	3387	14	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	105761	junction_1	135415.16228277766	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	484	1347	20.0	0	True	AATAAA	-19
PB.761.2	chr1	-	1552	3	full-splice_match	S100A16	ENST00000368703.6	946	3	-522	-84	493	-5	multi-exon	FALSE	canonical	1	7870	junction_2	1569145.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	598	909	20.0	7479	False	ATTAAA	-16
PB.7807.8	chr22	-	2546	11	novel_in_catalog	ST13	novel	3595	12	NA	NA	-9	-603	no_combination_of_known_junctions	FALSE	canonical	1	1699	junction_7	182024.78025436538	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	86	1102	20.0	5451	False	GATAAA	-18
PB.761.1	chr1	-	1133	3	full-splice_match	S100A16	ENST00000368706.8	1118	3	-19	4	-19	-4	multi-exon	FALSE	canonical	1	1556805	junction_2	794677.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	178	489	20.0	7	True	ATTAAA	-17
PB.9841.3	chr6	+	1734	7	novel_in_catalog	HLA-L	novel	1765	6	NA	NA	-19	2251	combination_of_known_junctions	FALSE	canonical	1	1920	junction_6	351248.48449847044	NA	2	NA	TRUE	NA	NA	NA	B	coding	215	648	560	1207	30.0	1	True	AATAAA	-15
PB.818.4	chr1	+	2989	14	novel_in_catalog	SEMA4A	novel	1057	9	NA	NA	-22	-1	no_combination_of_known_junctions	FALSE	canonical	1	3571	junction_1	63148.33529061816	NA	2	NA	TRUE	NA	NA	NA	C	coding	662	1989	256	2244	15.0	-7764	False	ATTAAA	-12
PB.7807.1	chr22	-	2963	12	full-splice_match	ST13	ENST00000216218.7	3595	12	568	64	111	-64	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	26	1024	20.0	5622	False	AGTAAA	-13
PB.2909.1	chr12	+	2464	12	novel_in_catalog	AC002996.1	novel	784	8	NA	NA	13026	18566	intron_retention	FALSE	canonical	1	699596	junction_1	377870.26514940633	NA	0	NA	TRUE	NA	NA	NA	A	coding	375	1128	68	1195	15.0	-49	True	ATTAAA	-21
PB.9349.38	chr5	-	2373	6	incomplete-splice_match	MCTP1	ENST00000505208.5	2158	18	-18	63149	0	451	3prime_fragment	FALSE	canonical	1	107369	junction_1	42315.67759306236	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	164	730	100.0	-1	True	NA	NA
PB.2909.3	chr12	+	1843	13	full-splice_match	ALDH2	ENST00000261733.6	9569	13	40	7686	14	173	multi-exon	FALSE	canonical	1	699596	junction_1	362698.5188767797	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	22	1575	25.0	-3	True	AATAGA	-19
PB.2909.2	chr12	+	2009	13	full-splice_match	ALDH2	ENST00000261733.6	9569	13	13	7547	13	312	multi-exon	FALSE	canonical	1	699596	junction_1	362698.5188767797	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	49	1602	15.0	-30	True	ATTAAA	-19
PB.9349.39	chr5	-	6001	5	incomplete-splice_match	MCTP1	ENST00000505208.5	2158	18	-18	67613	0	-4013	3prime_fragment	FALSE	canonical	1	114452	junction_4	37220.44183308414	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	164	694	90.0	-1	True	AAGAAA	-34
PB.818.1	chr1	+	3121	14	novel_in_catalog	SEMA4A	novel	1057	9	NA	NA	-69	2	combination_of_known_junctions	FALSE	canonical	1	5417	junction_1	62700.51194104111	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	384	2372	10.0	-8107	False	ATTAAA	-16
PB.729.1	chr1	-	3125	5	full-splice_match	GOLPH3L	ENST00000271732.7	2999	5	-132	6	-12	-6	multi-exon	FALSE	canonical	1	226146	junction_3	48662.086347458426	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	178	1035	10.0	-3	True	AATAAA	-16
PB.1275.1	chr10	-	2718	6	full-splice_match	ASB13	ENST00000357700.10	2699	6	-19	0	-2	0	multi-exon	FALSE	canonical	1	86455	junction_5	46406.19915226843	NA	1	NA	TRUE	NA	NA	NA	A	coding	278	837	47	883	20.0	-3	True	AATAAA	-19
PB.12258.10	chrX	+	3004	7	novel_in_catalog	SASH3	novel	352	2	NA	NA	-16	-3	intron_retention	FALSE	canonical	1	354297	junction_1	40630.89875944169	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	502	1638	30.0	0	True	AATAAA	-14
PB.12258.11	chrX	+	2943	6	novel_in_catalog	SASH3	novel	352	2	NA	NA	-13	-3	intron_retention	FALSE	canonical	1	354297	junction_1	41959.859258105236	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	133	1089	30.0	3	True	AATAAA	-14
PB.2893.7	chr12	+	2598	18	novel_in_catalog	IFT81	novel	3048	12	NA	NA	-10	-1	no_combination_of_known_junctions	FALSE	canonical	1	500	junction_13	46136.80567683771	NA	2	NA	TRUE	NA	NA	NA	C	coding	638	1917	123	2039	40.0	10	True	AATAAA	-26
PB.11684.1	chr9	+	3055	6	incomplete-splice_match	NR4A3	ENST00000618101.4	5706	9	31	32406	31	426	3prime_fragment	FALSE	canonical	1	10456	junction_3	32607.924760708094	NA	0	NA	TRUE	NA	NA	NA	A	coding	454	1365	738	2102	85.0	1	True	NA	NA
PB.1090.22	chr1	+	3068	11	full-splice_match	CD46	ENST00000357714.5	3188	11	119	1	53	-1	multi-exon	FALSE	canonical	1	476104	junction_6	374825.1013814443	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	38	1147	20.0	12	False	AATAAA	-23
PB.1090.23	chr1	+	3073	9	novel_in_catalog	CD46	novel	3371	14	NA	NA	15	-1	intron_retention	FALSE	canonical	1	643	junction_6	509101.9968461471	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	131	1159	20.0	-29	True	AATAAA	-16
PB.1090.20	chr1	+	3000	12	novel_in_catalog	CD46	novel	3371	14	NA	NA	0	-3	intron_retention	FALSE	canonical	1	6088	junction_1	464961.18823170033	NA	1	1	TRUE	NA	NA	NA	C	coding	354	1065	24	1088	25.0	-44	True	AATAAA	-14
PB.1090.21	chr1	+	2716	12	full-splice_match	CD46	ENST00000367041.5	3281	12	11	554	0	179	multi-exon	FALSE	canonical	1	476104	junction_6	454627.7971684071	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	146	1234	35.0	-44	True	AATAAA	-17
PB.1090.26	chr1	+	2646	12	full-splice_match	CD46	ENST00000354848.5	3233	12	33	554	22	179	multi-exon	FALSE	canonical	1	996227	junction_3	274260.14181276324	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	124	1278	35.0	-22	True	AATAAA	-17
PB.7703.4	chr22	-	2245	15	full-splice_match	PES1	ENST00000354694.11	2295	15	44	6	-6	-1	multi-exon	FALSE	canonical	1	342052	junction_1	200635.81239192656	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	64	1830	20.0	13	True	ATTAAA	-20
PB.1090.24	chr1	+	2963	12	full-splice_match	CD46	ENST00000367041.5	3281	12	28	290	17	-1	multi-exon	FALSE	canonical	1	476104	junction_6	454627.7971684071	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	129	1217	20.0	-27	True	AATAAA	-25
PB.10313.3	chr6	+	3469	6	incomplete-splice_match	WTAP	ENST00000614346.4	1623	7	129	-1755	129	1750	intron_retention	FALSE	canonical	1	40725	junction_5	195389.62847254713	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	216	671	30.0	0	True	ATTAAA	-20
PB.9349.32	chr5	-	5979	11	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	0	8209	any annotated donor/acceptor	FALSE	canonical	1	13555	junction_1	66210.99904245518	NA	1	1	TRUE	NA	NA	NA	C	coding	359	1080	165	1244	10.0	-2	True	NA	NA
PB.12143.2	chrX	+	2229	6	novel_in_catalog	JPX	novel	9658	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	26083	junction_3	118036.1025764575	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-2	True	NA	NA
PB.9349.33	chr5	-	3868	9	novel_not_in_catalog	MCTP1	novel	5396	23	NA	NA	0	6237	any annotated donor/acceptor	FALSE	canonical	1	13555	junction_1	65437.19665915843	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	164	1105	10.0	-1	True	AATAAA	-19
PB.6587.2	chr2	-	2083	1	intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	168	507	1	507	85.0	463	False	NA	NA
PB.6587.1	chr2	-	2096	2	intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	459	False	NA	NA
PB.7703.3	chr22	-	2250	15	full-splice_match	PES1	ENST00000335214.8	1988	15	-54	-208	-22	1	multi-exon	FALSE	canonical	1	32547	junction_6	268944.4337311319	NA	1	1	TRUE	NA	NA	NA	C	coding	583	1752	80	1831	15.0	-3	True	ATTAAA	-24
PB.3417.2	chr14	-	3747	33	full-splice_match	NEMF	ENST00000298310.9	6234	33	361	2126	-21	-381	multi-exon	FALSE	canonical	1	221137	junction_29	71909.1808229243	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	90	3320	30.0	-67	True	ACTAAA	-23
PB.3417.3	chr14	-	2816	28	incomplete-splice_match	NEMF	ENST00000298310.9	6234	33	370	7222	-12	191	3prime_fragment	FALSE	canonical	1	221137	junction_24	74191.25060840737	NA	0	NA	TRUE	NA	NA	NA	C	coding	912	2736	81	2816	70.0	-58	True	ATTAAA	-41
PB.1108.13	chr1	-	2701	17	incomplete-splice_match	INTS7	ENST00000366993.7	3422	20	-8	10943	-2	136	3prime_fragment	FALSE	canonical	1	166877	junction_8	33818.54986490172	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	108	2543	40.0	0	True	AATAAA	-24
PB.3417.1	chr14	-	4117	33	full-splice_match	NEMF	ENST00000298310.9	6234	33	382	1735	0	-3	multi-exon	TRUE	canonical	1	221137	junction_29	71909.1808229243	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	69	3299	30.0	-46	True	AATATA	-14
PB.3417.6	chr14	-	2526	25	incomplete-splice_match	NEMF	ENST00000298310.9	6234	33	394	17387	-1	1181	3prime_fragment	FALSE	canonical	1	221137	junction_21	75400.83601156592	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	57	2525	30.0	-34	True	AGTAAA	-44
PB.3417.7	chr14	-	1626	14	incomplete-splice_match	NEMF	ENST00000298310.9	6234	33	137	46644	137	-114	3prime_fragment	FALSE	canonical	1	221137	junction_10	67256.09935095349	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1311	314	1624	80.0	-6	True	NA	NA
PB.3417.4	chr14	-	2646	26	incomplete-splice_match	NEMF	ENST00000298310.9	6234	33	423	13708	0	4860	3prime_fragment	FALSE	canonical	1	221137	junction_22	74319.79602376744	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2619	28	2646	35.0	-5	True	AATGAA	-14
PB.3417.5	chr14	-	2787	27	novel_not_in_catalog	NEMF	novel	6234	33	NA	NA	1	4858	any annotated donor/acceptor	FALSE	canonical	1	397	junction_18	131036.79097998716	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	831	1956	2786	35.0	-32	True	AATGAA	-12
PB.66.1	chr1	-	3097	4	full-splice_match	ERRFI1	ENST00000377482.9	3104	4	-2	9	-2	-9	multi-exon	FALSE	canonical	1	195135	junction_3	199851.87392388616	NA	0	NA	TRUE	NA	NA	NA	A	coding	462	1389	227	1615	30.0	-2	True	AATAAA	-20
PB.302.12	chr1	-	3327	24	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	73157.57514270087	NA	2	NA	TRUE	NA	NA	NA	C	coding	876	2631	51	2681	10.0	37	True	GATAAA	-16
PB.302.11	chr1	-	3626	25	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	68296.50646257872	NA	32	2	TRUE	NA	NA	NA	C	coding	913	2742	89	2830	10.0	-1	True	GATAAA	-16
PB.302.10	chr1	-	2517	19	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56147.647858372286	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	30	2306	10.0	-3	True	GATAAA	-17
PB.302.16	chr1	-	3076	24	full-splice_match	INPP5B	ENST00000373024.7	3060	24	-17	1	-11	-1	multi-exon	FALSE	non_canonical	0	0	junction_22	63241.1852959828	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	106	2847	35.0	-18	False	AATAAA	-19
PB.302.15	chr1	-	2546	18	full-splice_match	INPP5B	ENST00000373027.5	3905	18	-26	1385	-26	3	multi-exon	FALSE	canonical	1	74624	junction_17	41132.823311702	NA	2	NA	TRUE	NA	NA	NA	C	coding	749	2250	64	2313	35.0	-37	False	AATAAA	-23
PB.302.14	chr1	-	3638	25	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	3	-122	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	68296.50646257872	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	86	2827	40.0	2	True	NA	NA
PB.9543.18	chr5	-	3667	32	novel_in_catalog	LARS	novel	4766	32	NA	NA	2	-174	intron_retention	FALSE	canonical	1	26414	junction_16	266609.8729843564	NA	0	NA	TRUE	NA	NA	NA	C	coding	1163	3492	155	3646	25.0	2	True	ATTAAA	-21
PB.9543.19	chr5	-	3635	31	novel_in_catalog	LARS	novel	4766	32	NA	NA	-5	-174	intron_retention	FALSE	canonical	1	9118	junction_19	277545.8370482833	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	138	3614	25.0	19	True	ATTAAA	-21
PB.9543.10	chr5	-	3620	31	novel_in_catalog	LARS	novel	4766	32	NA	NA	-1	0	intron_retention	FALSE	canonical	1	19448	junction_27	263200.2336757575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	33	3425	30.0	3	True	AATAAA	-16
PB.9543.11	chr5	-	3658	31	novel_in_catalog	LARS	novel	4766	32	NA	NA	11	0	intron_retention	FALSE	canonical	1	9050	junction_12	273130.2878333993	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	146	3463	30.0	11	True	AATAAA	-16
PB.9543.15	chr5	-	3925	33	novel_not_in_catalog	LARS	novel	4766	32	NA	NA	0	-1	intron_retention	FALSE	canonical	1	54	junction_32	307848.8361196667	NA	2	NA	TRUE	NA	NA	NA	C	coding	1122	3369	363	3731	30.0	8	True	AATAAA	-15
PB.9543.17	chr5	-	3679	32	full-splice_match	LARS	ENST00000394434.6	4766	32	39	1048	2	-175	multi-exon	FALSE	canonical	1	407291	junction_27	224158.19093806596	NA	0	NA	TRUE	NA	NA	NA	C	coding	1176	3531	129	3659	20.0	28	True	ATTAAA	-20
PB.2691.11	chr12	-	2804	4	novel_not_in_catalog	NEMP1	novel	5370	8	NA	NA	14640	1847	any annotated donor/acceptor	FALSE	canonical	1	1208	junction_2	111213.49210415075	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-5
PB.2691.10	chr12	-	3241	8	novel_not_in_catalog	NEMP1	novel	5370	8	NA	NA	0	1851	any annotated donor/acceptor	FALSE	canonical	1	1227	junction_3	78969.48971725778	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	19	1101	35.0	0	True	AATAAA	-9
PB.2691.13	chr12	-	1948	6	novel_in_catalog	NEMP1	novel	5370	8	NA	NA	-25	-2495	combination_of_known_junctions	FALSE	canonical	1	10720	junction_1	65013.24892481532	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	50	715	20.0	-4	True	AATAAA	-14
PB.2691.12	chr12	-	3273	9	full-splice_match	NEMP1	ENST00000300128.8	5590	9	-25	2342	-25	1600	multi-exon	FALSE	canonical	1	104793	junction_6	50754.546938550244	NA	2	NA	TRUE	NA	NA	NA	C	coding	444	1335	50	1384	35.0	-4	True	ATTAAA	-8
PB.2915.2	chr12	-	2633	22	incomplete-splice_match	NAA25	ENST00000261745.8	6010	24	226	12579	0	2	3prime_fragment	FALSE	canonical	1	147404	junction_11	37531.21372925381	NA	0	NA	TRUE	NA	NA	NA	B	coding	870	2610	24	2633	85.0	-14	True	ACTAAA	-8
PB.2915.3	chr12	-	2831	23	novel_not_in_catalog	NAA25	novel	6010	24	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	65836.8099809755	NA	0	NA	TRUE	NA	NA	NA	B	coding	842	2526	306	2831	85.0	-14	True	ACTAAA	-8
PB.2915.1	chr12	-	3901	22	novel_not_in_catalog	NAA25	novel	6010	24	NA	NA	-5	2	intron_retention	FALSE	canonical	1	6379	junction_8	68792.38230523074	NA	1	1	TRUE	NA	NA	NA	B	coding	551	1656	18	1673	85.0	-8	True	ACTAAA	-8
PB.7064.1	chr2	-	2184	4	full-splice_match	HTR2B	ENST00000258400.3	2246	4	54	8	54	-8	multi-exon	FALSE	canonical	1	7003	junction_3	5480.349623883498	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	460	1905	50.0	4	True	AATAAA	-26
PB.7064.2	chr2	-	1799	4	novel_not_in_catalog	HTR2B	novel	2246	4	NA	NA	56	-8	any annotated donor/acceptor	FALSE	canonical	1	1284	junction_3	8139.300393085938	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	201	1520	50.0	6	True	AATAAA	-26
PB.7064.3	chr2	-	1778	4	novel_not_in_catalog	HTR2B	novel	2246	4	NA	NA	-11	-8	any annotated donor/acceptor	FALSE	canonical	1	3621	junction_3	7049.356156573608	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	129	1499	50.0	-31	False	AATAAA	-26
PB.2915.8	chr12	-	2514	21	novel_in_catalog	NAA25	novel	6010	24	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	10633	junction_18	55440.91807453679	NA	0	NA	TRUE	NA	NA	NA	B	coding	687	2061	454	2514	85.0	-14	True	ACTAAA	-8
PB.848.1	chr1	+	2570	5	novel_in_catalog	PEA15	novel	2471	4	NA	NA	-1	-7	no_combination_of_known_junctions	FALSE	canonical	1	14853	junction_1	1585632.5105892285	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	295	687	45.0	1	True	AATAAA	-18
PB.9967.4	chr6	+	3396	13	novel_not_in_catalog	TBC1D22B	novel	3462	13	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	2920	junction_8	48228.85970751849	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	147	1085	5.0	0	True	AATAAA	-19
PB.11042.1	chr8	-	3226	12	full-splice_match	KCTD9	ENST00000221200.8	3401	12	172	3	11	-3	multi-exon	TRUE	canonical	1	147	junction_2	23123.382858265297	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	50	1219	40.0	135	False	ATTAAA	-17
PB.6386.10	chr2	-	1832	6	novel_not_in_catalog	SUPT7L	novel	4488	6	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	11336	junction_4	188116.86183476483	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	812	1411	25.0	185	False	AATATA	-13
PB.6462.4	chr2	+	6108	4	novel_in_catalog	STON1	novel	2243	2	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	16937	junction_1	19582.49919358269	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	693	2900	15.0	16	True	ATTAAA	-14
PB.6462.1	chr2	+	5523	4	full-splice_match	STON1	ENST00000404752.5	5511	4	-14	2	-14	-2	multi-exon	FALSE	canonical	1	31158	junction_1	13021.354469571213	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	108	2315	15.0	-12	True	ATTAAA	-14
PB.6462.3	chr2	+	5613	5	full-splice_match	STON1	ENST00000406226.1	5614	5	-2	3	-2	-2	multi-exon	FALSE	canonical	1	7287	junction_1	23316.41809433859	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	198	2405	15.0	15	True	ATTAAA	-14
PB.6462.2	chr2	+	3800	11	novel_in_catalog	STON1	novel	2243	2	NA	NA	3	81090	intron_retention	FALSE	canonical	1	2299	junction_3	14760.711024879525	NA	0	NA	TRUE	NA	NA	NA	C	coding	1182	3549	91	3639	35.0	5	True	AATAAA	-27
PB.2264.1	chr11	+	6125	40	incomplete-splice_match	ATM	ENST00000278616.8	13147	63	231	56636	-22	-3431	3prime_fragment	FALSE	canonical	1	106996	junction_21	50608.003283400496	NA	1	NA	TRUE	NA	NA	NA	B	coding	1990	5970	155	6124	70.0	-4	True	NA	NA
PB.2264.3	chr11	+	3965	26	incomplete-splice_match	ATM	ENST00000524792.5	5912	37	20558	5	-42	-5	5prime_fragment	TRUE	canonical	1	150978	junction_20	73618.88968410213	NA	0	NA	TRUE	NA	NA	NA	B	coding	1141	3426	19	3444	95.0	NA	False	NA	NA
PB.2264.2	chr11	+	2169	1	novel_in_catalog	ATM	novel	4841	27	NA	NA	-5	-4024	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	13	True	NA	NA
PB.7127.3	chr20	-	5006	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	99	7807	-1	805	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	5	NA	TRUE	NA	NA	NA	C	coding	391	1176	175	1350	10.0	22	True	NA	NA
PB.11042.2	chr8	-	3512	13	novel_in_catalog	KCTD9	novel	3401	12	NA	NA	36	-3	combination_of_known_junctions	FALSE	canonical	1	147	junction_2	21958.913107304896	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	678	1505	40.0	79	False	ATTAAA	-17
PB.11894.3	chr9	-	3829	7	incomplete-splice_match	CAMSAP1	ENST00000312405.10	6054	15	60099	846	3611	-4	5prime_fragment	FALSE	canonical	1	148719	junction_6	32931.008273611464	NA	7	NA	TRUE	NA	NA	NA	B	coding	943	2832	116	2947	30.0	NA	False	AATAAA	-19
PB.11894.2	chr9	-	4442	7	incomplete-splice_match	CAMSAP1	ENST00000312405.10	6054	15	60342	-10	-3489	10	5prime_fragment	FALSE	canonical	1	148719	junction_6	32931.008273611464	NA	1	NA	TRUE	NA	NA	NA	B	coding	850	2553	152	2704	10.0	NA	False	AATAAA	-32
PB.58.2	chr1	+	3052	4	full-splice_match	PHF13	ENST00000377648.4	3681	4	101	528	24	-528	multi-exon	FALSE	canonical	1	107886	junction_1	39325.62494806097	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	282	1184	70.0	2	True	NA	NA
PB.58.1	chr1	+	3602	4	full-splice_match	PHF13	ENST00000377648.4	3681	4	46	33	-31	-33	multi-exon	FALSE	canonical	1	107886	junction_1	39325.62494806097	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	337	1239	20.0	0	True	AATAAA	-29
PB.9483.26	chr5	+	1832	9	incomplete-splice_match	MATR3	ENST00000510056.5	3040	14	-16	10298	-2	-8	3prime_fragment	FALSE	canonical	1	500657	junction_7	396260.3985655889	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1563	270	1832	60.0	1	True	NA	NA
PB.9483.27	chr5	+	3943	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	147046	junction_9	873881.4014702085	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	242	2929	25.0	-1	True	AATAAA	-22
PB.9483.24	chr5	+	2363	12	incomplete-splice_match	MATR3	ENST00000510056.5	3040	14	-10	6841	1	-29	3prime_fragment	FALSE	canonical	1	147046	junction_9	909204.3413501992	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2100	264	2363	45.0	7	True	GATAAA	-7
PB.11248.4	chr8	+	1824	2	full-splice_match	PLEKHF2	ENST00000315367.3	2881	2	108	949	108	817	multi-exon	FALSE	canonical	1	120310	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	134	883	35.0	-3	True	AATAAA	-16
PB.2928.1	chr12	+	2410	3	antisense	novelGene_RBM19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	560	junction_2	765.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	2190	False	NA	NA
PB.11850.35	chr9	-	2069	15	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	356059.08794686175	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	229	1461	85.0	16	True	NA	NA
PB.6945.11	chr2	-	3057	16	novel_not_in_catalog	TRAK2	novel	6510	16	NA	NA	-4	-4378	any annotated donor/acceptor	FALSE	canonical	1	5683	junction_1	90888.31854084562	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2082	308	2389	25.0	-3	True	AATAAA	-20
PB.9483.22	chr5	+	4501	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-2	2	intron_retention	FALSE	canonical	1	147046	junction_9	890705.3617728942	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2526	270	2795	20.0	1	True	NA	NA
PB.2999.2	chr12	-	1544	4	full-splice_match	RILPL2	ENST00000280571.9	6141	4	239	4358	239	-4358	multi-exon	FALSE	canonical	1	452471	junction_3	109960.22157226776	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	59	694	10.0	-3	True	AGTAAA	-17
PB.720.5	chr1	-	2813	4	incomplete-splice_match	APH1A	ENST00000360244.8	2353	6	276	1	-4	-1	intron_retention	FALSE	canonical	1	1860204	junction_3	211726.37427323242	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	1303	1698	20.0	-14	True	AATAAA	-11
PB.9483.23	chr5	+	3351	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	1	38	combination_of_known_junctions	FALSE	canonical	1	147046	junction_9	873881.4014702085	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	261	2948	35.0	10	True	AATAAA	-37
PB.11273.3	chr8	-	2903	6	novel_not_in_catalog	ANKRD46	novel	1686	6	NA	NA	-12	-2	any annotated donor/acceptor	FALSE	canonical	1	878	junction_5	101782.51233488001	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	436	1122	20.0	35	False	AATAAA	-19
PB.8969.1	chr4	+	2963	1	incomplete-splice_match	FGF2	ENST00000264498.7	6775	3	68565	1	68442	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	2277	False	AATAAA	-30
PB.5187.16	chr17	-	3859	10	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_9	763732.9504260918	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	171	1274	40.0	-1	True	AATAAA	-45
PB.2223.9	chr11	+	2728	1	novel_in_catalog	C11orf54	novel	4094	8	NA	NA	6	-9354	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	228	687	1117	1803	25.0	-11	True	AATAAA	-19
PB.9423.1	chr5	-	1617	4	full-splice_match	C5orf63	ENST00000509733.7	553	4	10	-1074	-2	-4	multi-exon	FALSE	canonical	1	34037	junction_2	4088.140109579851	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	9	True	AATAAA	-15
PB.743.12	chr1	+	3683	15	novel_not_in_catalog	PIP5K1A	novel	373	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	6371	junction_11	95704.35025394933	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	423	2018	15.0	23	True	AATAAA	-19
PB.10097.5	chr6	+	2397	19	novel_in_catalog	ORC3	novel	2470	19	NA	NA	-4	1	no_combination_of_known_junctions	FALSE	canonical	1	17195	junction_8	81805.93439770797	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	44	2068	20.0	-9	True	AATAAA	-24
PB.2223.6	chr11	+	2328	8	full-splice_match	C11orf54	ENST00000617482.4	2417	8	68	21	3	-2	multi-exon	FALSE	canonical	1	23580	junction_5	97788.81761182292	NA	14	2	TRUE	NA	NA	NA	C	coding	256	771	165	935	25.0	-25	True	AATAAA	-13
PB.10097.7	chr6	+	2550	21	novel_in_catalog	ORC3	novel	2470	19	NA	NA	2	-41	no_combination_of_known_junctions	FALSE	canonical	1	35998	junction_3	80792.55387031344	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	284	2263	50.0	-3	True	AGTAAA	-17
PB.3394.13	chr14	-	3688	19	novel_in_catalog	SEC23A	novel	3813	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	3124	junction_6	171280.46313186648	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	226	1824	20.0	-1	True	AATAAA	-17
PB.3394.14	chr14	-	3550	20	full-splice_match	SEC23A	ENST00000307712.10	4135	20	398	187	82	-187	multi-exon	FALSE	canonical	1	431924	junction_1	81956.09376784749	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	121	2418	30.0	-13	True	AATAAA	-16
PB.3394.15	chr14	-	3727	21	novel_not_in_catalog	SEC23A	novel	3813	2	NA	NA	-2	-189	intron_retention	FALSE	canonical	1	9943	junction_6	212111.09350668106	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	228	2597	35.0	-3	True	AATAAA	-14
PB.3394.16	chr14	-	3519	20	full-splice_match	SEC23A	ENST00000307712.10	4135	20	290	326	-3	-326	multi-exon	FALSE	canonical	1	431924	junction_1	81956.09376784749	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	229	2526	25.0	-4	True	NA	NA
PB.5187.19	chr17	-	3435	13	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	61389	junction_2	1891037.5257020434	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	171	1391	40.0	-1	True	AATAAA	-45
PB.3394.18	chr14	-	3259	20	full-splice_match	SEC23A	ENST00000307712.10	4135	20	298	578	3	443	multi-exon	FALSE	canonical	1	431924	junction_1	81956.09376784749	NA	1	NA	TRUE	NA	NA	NA	C	coding	765	2298	221	2518	35.0	4	True	AATAAA	-25
PB.3394.19	chr14	-	2808	20	full-splice_match	SEC23A	ENST00000307712.10	4135	20	296	1031	1	-10	multi-exon	FALSE	canonical	1	431924	junction_1	81956.09376784749	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	223	2520	30.0	2	True	AATAAA	-20
PB.5998.2	chr19	+	3342	6	full-splice_match	ZNF546	ENST00000599504.5	626	6	28	-2744	1	2	multi-exon	FALSE	canonical	1	6742	junction_2	7008.546068907588	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	180	2576	80.0	4	True	NA	NA
PB.10097.8	chr6	+	2573	21	novel_not_in_catalog	ORC3	novel	2470	19	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	1	28163	junction_2	82582.07962603024	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	273	2249	25.0	-7	True	AATAAA	-19
PB.5998.1	chr19	+	3434	7	full-splice_match	ZNF546	ENST00000600094.5	3426	7	-6	-2	-3	2	multi-exon	FALSE	canonical	1	3680	junction_3	8038.497318460018	NA	13	2	TRUE	NA	NA	NA	C	coding	810	2433	236	2668	80.0	-3	True	NA	NA
PB.9324.1	chr5	-	5612	2	full-splice_match	CKMT2-AS1	ENST00000512287.1	601	2	5	-5016	5	5016	multi-exon	FALSE	canonical	1	19251	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-1	True	NA	NA
PB.2256.8	chr11	-	4051	1	novel_in_catalog	KBTBD3	novel	3396	2	NA	NA	13	2719	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	11	True	NA	NA
PB.9324.2	chr5	-	3949	2	novel_not_in_catalog	CKMT2-AS1	novel	572	3	NA	NA	2	3334	any annotated donor/acceptor	FALSE	canonical	1	120	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	3	True	TTTAAA	-15
PB.9324.4	chr5	-	2043	2	full-splice_match	CKMT2-AS1	ENST00000502041.2	2069	2	3	23	-1	-23	multi-exon	FALSE	canonical	1	24247	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-11	True	NA	NA
PB.1964.19	chr11	+	4347	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	28600	junction_1	461000.70617342874	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	2148	2759	40.0	0	True	AATAAA	-24
PB.1964.18	chr11	+	1271	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	140	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	375	1268	5.0	4	True	AATAGA	-23
PB.2256.2	chr11	-	3673	3	full-splice_match	KBTBD3	ENST00000526793.5	3751	3	77	1	-33	-1	multi-exon	TRUE	canonical	1	22472	junction_2	33827.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	612	1839	84	1922	25.0	42	False	AATAAA	-18
PB.2256.3	chr11	-	2483	4	full-splice_match	KBTBD3	ENST00000531837.1	2682	4	418	-219	1	219	multi-exon	FALSE	canonical	1	51332	junction_2	15971.547395985845	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	250	2088	15.0	-1	True	AATAAA	-20
PB.1964.15	chr11	+	2558	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	-4	-309	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	384	1277	25.0	-5	True	ATTAAA	-17
PB.2256.1	chr11	-	3899	4	full-splice_match	KBTBD3	ENST00000531837.1	2682	4	358	-1575	52	-1	multi-exon	FALSE	canonical	1	51332	junction_2	15971.547395985845	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	310	2148	25.0	17	True	AATAAA	-18
PB.2256.6	chr11	-	706	4	full-splice_match	KBTBD3	ENST00000531837.1	2682	4	418	1558	1	121	multi-exon	FALSE	canonical	1	51332	junction_2	15971.547395985845	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	456	250	705	25.0	-1	True	AATAAA	-18
PB.2256.7	chr11	-	3462	2	full-splice_match	KBTBD3	ENST00000526805.1	741	2	3	-2724	3	2724	multi-exon	FALSE	canonical	1	66350	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1	True	NA	NA
PB.2256.4	chr11	-	2282	3	full-splice_match	KBTBD3	ENST00000526793.5	3751	3	112	1357	1	219	multi-exon	FALSE	canonical	1	22472	junction_2	33827.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	49	1887	15.0	-1	True	AATAAA	-20
PB.2256.5	chr11	-	2251	4	full-splice_match	KBTBD3	ENST00000531837.1	2682	4	417	14	0	-14	multi-exon	FALSE	canonical	1	51332	junction_2	15971.547395985845	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	251	2089	60.0	-2	True	NA	NA
PB.11488.2	chr9	-	2588	6	full-splice_match	CAAP1	ENST00000625311.1	1532	6	-7	-1049	-7	-2	multi-exon	FALSE	canonical	1	30142	junction_5	106107.84774181408	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	324	974	15.0	-5	True	ATTAAA	-16
PB.11042.5	chr8	-	3296	13	novel_in_catalog	KCTD9	novel	3401	12	NA	NA	2	-180	combination_of_known_junctions	FALSE	canonical	1	147	junction_2	21832.044057830582	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	639	1466	25.0	-10	True	AATAAA	-20
PB.9483.29	chr5	+	4212	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	1	215	combination_of_known_junctions	FALSE	canonical	1	147046	junction_9	873881.4014702085	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	264	2951	45.0	7	True	ATTAAA	-14
PB.5027.1	chr17	-	4262	12	full-splice_match	MPP2	ENST00000377184.7	4206	12	-58	2	-58	-2	multi-exon	FALSE	canonical	1	23843	junction_11	24564.75115531021	NA	2	1	TRUE	NA	NA	NA	C	coding	569	1710	105	1814	0.0	7082	False	ATTAAA	-14
PB.5514.8	chr18	+	3356	7	novel_not_in_catalog	HMSD	novel	682	6	NA	NA	9940	7598	any annotated donor/acceptor	FALSE	canonical	1	5310	junction_1	71109.19732511556	NA	6	NA	TRUE	NA	NA	NA	C	coding	374	1125	138	1262	30.0	21	True	NA	NA
PB.5514.6	chr18	+	3093	3	incomplete-splice_match	HMSD	ENST00000408945.4	2101	4	8	4600	8	-4600	3prime_fragment	FALSE	canonical	1	29093	junction_1	6514.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	8	True	NA	NA
PB.11604.13	chr9	-	2261	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	422	3	-149	-3	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	128	769	25.0	6538	False	AATAAA	-17
PB.5514.4	chr18	+	3471	10	novel_in_catalog	HMSD	novel	2101	4	NA	NA	-18	5621	no_combination_of_known_junctions	FALSE	canonical	1	2526	junction_3	79644.92841913344	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	2230	3354	25.0	-18	True	AATAAA	-14
PB.5514.5	chr18	+	5232	8	novel_in_catalog	HMSD	novel	2101	4	NA	NA	-7	7598	intron_retention	FALSE	canonical	1	3556	junction_3	80744.07699639646	NA	5	NA	TRUE	NA	NA	NA	C	coding	245	738	386	1123	30.0	-7	True	NA	NA
PB.5514.2	chr18	+	3639	9	novel_in_catalog	HMSD	novel	2101	4	NA	NA	-39	7601	no_combination_of_known_junctions	TRUE	canonical	1	3556	junction_3	79265.10255268392	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	418	1542	25.0	-105	False	NA	NA
PB.5514.3	chr18	+	1969	3	incomplete-splice_match	HMSD	ENST00000481726.1	682	6	-82	19924	-26	16	3prime_fragment	FALSE	canonical	1	17556	junction_1	26091.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	105	318	1618	1935	20.0	-92	False	NA	NA
PB.11488.3	chr9	-	2571	6	novel_not_in_catalog	CAAP1	novel	2791	6	NA	NA	10	-68	any annotated donor/acceptor	FALSE	canonical	1	642	junction_4	123251.0495556123	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	63	1049	45.0	24	True	AATAAA	-22
PB.5514.1	chr18	+	2094	4	full-splice_match	HMSD	ENST00000408945.4	2101	4	8	-1	8	1	multi-exon	FALSE	canonical	1	29093	junction_1	16945.71175515767	NA	4	NA	TRUE	NA	NA	NA	C	coding	139	420	195	614	10.0	8	True	NA	NA
PB.84.1	chr1	+	2304	13	full-splice_match	PGD	ENST00000270776.12	1885	13	-51	-368	-15	368	multi-exon	FALSE	canonical	1	546719	junction_7	522246.33160508866	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	90	1541	10.0	-354	False	ATTAAA	-19
PB.11042.6	chr8	-	3055	12	full-splice_match	KCTD9	ENST00000221200.8	3401	12	166	180	5	-180	multi-exon	FALSE	canonical	1	147	junction_2	23123.382858265297	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	56	1225	25.0	129	False	AATAAA	-20
PB.84.3	chr1	+	1901	13	full-splice_match	PGD	ENST00000270776.12	1885	13	-16	0	-9	0	multi-exon	FALSE	canonical	1	546719	junction_7	522246.33160508866	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	55	1506	10.0	0	True	AATAAA	-17
PB.84.2	chr1	+	3425	12	novel_in_catalog	PGD	novel	806	7	NA	NA	3	-2	intron_retention	FALSE	canonical	1	840304	junction_4	444030.4733230266	NA	10	1	TRUE	NA	NA	NA	C	coding	260	783	72	854	15.0	-336	False	AATAAA	-15
PB.84.4	chr1	+	1828	12	novel_in_catalog	PGD	novel	806	7	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	36846	junction_3	674378.73910263	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	50	1435	15.0	5	True	AATAAA	-15
PB.10645.21	chr7	+	3700	20	novel_not_in_catalog	DMTF1	novel	3801	18	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	6857	junction_1	148362.0303951997	NA	6	1	TRUE	NA	NA	NA	C	coding	701	2106	593	2698	60.0	0	True	AATGAA	-18
PB.10645.20	chr7	+	3713	17	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	2817	junction_7	130252.33044454281	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	1047	2531	30.0	0	True	AATAAA	-14
PB.10645.23	chr7	+	2949	11	incomplete-splice_match	DMTF1	ENST00000394703.9	4038	20	26989	9	-1653	0	5prime_fragment	FALSE	canonical	1	207397	junction_2	75852.1113855112	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	42	1766	30.0	NA	False	AATAAA	-15
PB.10645.22	chr7	+	2906	1	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	21	-7982	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-130	False	ATTAAA	-37
PB.2269.12	chr11	-	2263	14	full-splice_match	RDX	ENST00000645495.1	4383	14	0	2120	0	-19	multi-exon	FALSE	canonical	1	73453	junction_2	135954.16621100722	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	246	1964	25.0	-1	True	NA	NA
PB.2269.13	chr11	-	1231	10	incomplete-splice_match	RDX	ENST00000645495.1	4383	14	-19	18343	7	6152	3prime_fragment	FALSE	canonical	1	169957	junction_5	50315.921197476026	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	966	265	1230	70.0	9	True	NA	NA
PB.2269.11	chr11	-	2838	14	full-splice_match	RDX	ENST00000645495.1	4383	14	-29	1574	-3	526	multi-exon	FALSE	canonical	1	73453	junction_2	135954.16621100722	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	275	1993	60.0	-1	True	TTTAAA	-29
PB.11760.6	chr9	+	3397	20	novel_in_catalog	CNTRL	novel	7660	44	NA	NA	-50	-9	no_combination_of_known_junctions	FALSE	canonical	1	7002	junction_3	47653.53189027786	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3189	208	3396	60.0	-19	False	TATAAA	-3
PB.8260.11	chr3	-	5864	13	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	-21	-31	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_9	242030.01546909884	NA	3	1	TRUE	NA	NA	NA	C	coding	405	1218	1247	2464	35.0	296	False	AATAAA	-35
PB.8260.10	chr3	-	5335	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	10	-31	no_combination_of_known_junctions	FALSE	canonical	1	15297	junction_14	224176.9295024989	NA	5	NA	TRUE	NA	NA	NA	C	coding	622	1869	67	1935	35.0	3	True	AATAAA	-35
PB.8260.16	chr3	-	6003	15	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-5	-34	any annotated donor/acceptor	FALSE	canonical	1	938	junction_9	226692.39798062062	NA	4	NA	TRUE	NA	NA	NA	C	coding	745	2238	369	2606	35.0	0	True	AATAAA	-32
PB.8618.1	chr3	-	2837	5	full-splice_match	TM4SF19	ENST00000273695.3	1022	5	-80	-1735	35	1730	multi-exon	FALSE	canonical	1	24458	junction_2	11534.648065719213	NA	3	NA	TRUE	NA	NA	NA	A	coding	209	630	207	836	10.0	132	False	NA	NA
PB.11441.7	chr9	+	3490	7	novel_not_in_catalog	PDCD1LG2	novel	2365	7	NA	NA	13	1120	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	23299.562302159717	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	236	1075	50.0	1	True	NA	NA
PB.11274.32	chr8	-	2368	16	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-15	intron_retention	FALSE	canonical	1	31534	junction_15	1969130.5591611136	NA	1	1	TRUE	NA	NA	NA	C	coding	636	1911	397	2307	55.0	-2	True	AAGAAA	-36
PB.11274.31	chr8	-	2401	16	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	0	-8	intron_retention	FALSE	non_canonical	0	0	junction_8	1973368.5736341253	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	505	2307	80.0	-1	True	AAAACA	-5
PB.11274.30	chr8	-	2381	15	incomplete-splice_match	PABPC1	ENST00000522387.5	2331	16	-96	139	-1	-15	intron_retention	FALSE	canonical	1	144506	junction_13	1890134.6623582032	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	506	2320	55.0	-2	True	AAGAAA	-36
PB.11274.37	chr8	-	2447	16	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	-1	4	intron_retention	FALSE	canonical	1	11	junction_8	1973367.0914084034	NA	3	1	TRUE	NA	NA	NA	C	coding	350	1053	506	1558	70.0	-2	True	AAGAAA	-35
PB.11274.36	chr8	-	2694	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	4	intron_retention	FALSE	canonical	1	1799488	junction_8	1653183.7676571065	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	1175	2614	70.0	-2	True	AAGAAA	-35
PB.11274.34	chr8	-	2210	13	novel_in_catalog	PABPC1	novel	608	3	NA	NA	0	-15	intron_retention	FALSE	canonical	1	27522	junction_4	1640010.7173012346	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	505	1929	55.0	-1	True	AAGAAA	-36
PB.9316.2	chr5	-	4869	9	full-splice_match	MTX3	ENST00000512528.2	7910	9	5	3036	-1	-15	multi-exon	FALSE	canonical	1	33416	junction_2	28574.065520317108	NA	2	NA	TRUE	NA	NA	NA	C	coding	312	939	23	961	75.0	-1	True	NA	NA
PB.9316.3	chr5	-	4785	8	full-splice_match	MTX3	ENST00000509852.5	1655	8	-6	-3124	0	-15	multi-exon	FALSE	canonical	1	55487	junction_7	17699.394222309835	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	28	774	75.0	-6	True	NA	NA
PB.11274.39	chr8	-	2262	15	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	1	4	intron_retention	FALSE	non_canonical	0	0	junction_7	2032879.9856453775	NA	4	1	TRUE	NA	NA	NA	C	coding	353	1062	504	1565	70.0	0	True	AAGAAA	-35
PB.9316.1	chr5	-	7822	8	full-splice_match	MTX3	ENST00000509852.5	1655	8	2	-6169	2	0	multi-exon	FALSE	canonical	1	55487	junction_7	17699.394222309835	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	20	766	20.0	2	True	AATAAA	-14
PB.9316.4	chr5	-	2878	9	full-splice_match	MTX3	ENST00000512528.2	7910	9	9	5023	3	1137	multi-exon	FALSE	canonical	1	33416	junction_2	28574.065520317108	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	19	957	75.0	3	True	NA	NA
PB.9316.5	chr5	-	2789	8	full-splice_match	MTX3	ENST00000509852.5	1655	8	3	-1137	3	1137	multi-exon	FALSE	canonical	1	55487	junction_7	17699.394222309835	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	19	765	75.0	3	True	NA	NA
PB.648.5	chr1	-	2178	14	full-splice_match	GDAP2	ENST00000369443.9	8828	14	-20	6670	-20	29	multi-exon	FALSE	canonical	1	55174	junction_13	29683.95485999427	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	271	1764	20.0	-30	False	AATATA	-22
PB.11488.1	chr9	-	2721	6	full-splice_match	CAAP1	ENST00000333916.7	2791	6	-22	92	-22	-66	multi-exon	FALSE	canonical	1	124126	junction_5	73149.42314851157	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	112	1197	40.0	-25	False	AATAAA	-24
PB.9368.31	chr5	+	3370	22	novel_in_catalog	PAM	novel	570	2	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	28962	junction_21	254314.39611542944	NA	3	1	TRUE	NA	NA	NA	C	coding	780	2343	378	2720	20.0	8	True	AATAAA	-17
PB.10732.1	chr7	+	1544	10	full-splice_match	GNB2	ENST00000303210.8	1878	10	329	5	-18	2	multi-exon	FALSE	canonical	1	172029	junction_1	1278613.0517893303	NA	0	NA	TRUE	NA	NA	NA	A	coding	340	1023	154	1176	0.0	22	True	CATAAA	-22
PB.3952.9	chr15	+	3495	22	novel_in_catalog	KIF23	novel	3723	23	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	9928	junction_4	142992.13368261408	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	483	2885	40.0	-22	True	ATTAAA	-13
PB.11778.6	chr9	-	2395	18	novel_in_catalog	STRBP	novel	663	5	NA	NA	91	-203	combination_of_known_junctions	FALSE	canonical	1	113664	junction_17	120591.7740243754	NA	1	NA	TRUE	NA	NA	NA	B	coding	672	2019	203	2221	80.0	112	False	NA	NA
PB.1129.14	chr1	-	2985	21	novel_not_in_catalog	EPRS	novel	5014	32	NA	NA	3	-4	any annotated donor/acceptor	FALSE	canonical	1	1368	junction_15	310555.85659173696	NA	3	1	TRUE	NA	NA	NA	C	coding	975	2925	61	2985	70.0	10	True	NA	NA
PB.5176.6	chr17	+	6175	16	novel_in_catalog	DDX42	novel	589	3	NA	NA	-12	0	intron_retention	FALSE	canonical	1	397811	junction_1	186726.73688860593	NA	3	NA	TRUE	NA	NA	NA	C	coding	775	2328	3037	5364	70.0	-10	True	NA	NA
PB.1129.16	chr1	-	2872	19	novel_in_catalog	EPRS	novel	5014	32	NA	NA	23	-4	no_combination_of_known_junctions	FALSE	canonical	1	9260	junction_13	262409.96364054136	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2052	821	2872	70.0	164	False	NA	NA
PB.6692.1	chr2	+	3630	19	full-splice_match	MERTK	ENST00000295408.8	3954	19	128	196	-1	-1	multi-exon	TRUE	canonical	1	49876	junction_1	18860.317672150817	NA	0	NA	TRUE	NA	NA	NA	A	coding	999	3000	130	3129	35.0	0	True	AATAAA	-13
PB.1129.12	chr1	-	3129	21	novel_not_in_catalog	EPRS	novel	5014	32	NA	NA	-9	-4	any annotated donor/acceptor	FALSE	canonical	1	1310	junction_20	309915.36779793206	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2664	466	3129	70.0	-2	True	NA	NA
PB.5176.7	chr17	+	3792	17	novel_in_catalog	DDX42	novel	589	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	38656	junction_4	262967.28480363503	NA	11	1	TRUE	NA	NA	NA	C	coding	674	2025	957	2981	70.0	5	True	NA	NA
PB.12002.5	chrX	-	1699	16	full-splice_match	ACOT9	ENST00000379303.9	3117	16	-3	1421	0	-3	multi-exon	FALSE	canonical	1	321381	junction_14	76416.39750454959	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	133	1479	30.0	-1	True	AATAAA	-18
PB.12002.4	chrX	-	2753	14	novel_in_catalog	ACOT9	novel	3117	16	NA	NA	6	-3	intron_retention	FALSE	canonical	1	39059	junction_6	134452.64048604117	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	124	741	30.0	8	True	AATAAA	-18
PB.12002.7	chrX	-	2747	16	novel_not_in_catalog	ACOT9	novel	3117	16	NA	NA	6	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	134919.4390340481	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	124	873	35.0	8	True	AATAAA	-12
PB.12002.6	chrX	-	2674	15	novel_not_in_catalog	ACOT9	novel	3117	16	NA	NA	6	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	167796.90119642392	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	124	741	35.0	8	True	AATAAA	-13
PB.12002.1	chrX	-	2509	17	novel_not_in_catalog	ACOT9	novel	3117	16	NA	NA	1	1193	any annotated donor/acceptor	FALSE	canonical	1	49	junction_1	130755.96260824734	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	132	1478	45.0	0	True	NA	NA
PB.5176.4	chr17	+	3751	18	full-splice_match	DDX42	ENST00000389924.6	3939	18	-17	205	-17	12	multi-exon	FALSE	canonical	1	397811	junction_1	195156.28141359784	NA	2	NA	TRUE	NA	NA	NA	C	coding	938	2817	222	3038	25.0	-15	True	ATTAAA	-23
PB.12002.3	chrX	-	1683	15	full-splice_match	ACOT9	ENST00000336430.11	1675	15	-3	-5	-3	5	multi-exon	FALSE	canonical	1	141439	junction_13	104511.84641807016	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	136	1455	20.0	-4	True	AATAAA	-26
PB.12002.2	chrX	-	2850	15	novel_in_catalog	ACOT9	novel	3117	16	NA	NA	0	11	intron_retention	FALSE	canonical	1	321381	junction_13	77856.73924512028	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	133	882	10.0	-1	True	AATAAA	-32
PB.9707.4	chr6	+	3759	21	novel_not_in_catalog	PRPF4B	novel	6775	16	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	9583	junction_17	154052.70663334677	NA	3	NA	TRUE	NA	NA	NA	C	coding	1007	3024	101	3124	15.0	-89	True	AATAAA	-14
PB.1932.17	chr11	-	3712	17	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-40	-2	intron_retention	FALSE	canonical	1	18601	junction_16	240732.9257951041	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	360	1901	85.0	1	True	AATAAA	-4
PB.9186.12	chr5	-	2810	24	incomplete-splice_match	NUP155	ENST00000231498.7	8143	35	67	21086	-11	-8209	3prime_fragment	FALSE	canonical	1	221976	junction_23	57863.71933462534	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2646	165	2810	60.0	349	False	NA	NA
PB.9186.11	chr5	-	4228	34	incomplete-splice_match	NUP155	ENST00000231498.7	8143	35	86	4669	8	-906	3prime_fragment	FALSE	canonical	1	221976	junction_33	74669.8388321514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1339	4020	146	4165	45.0	-6	True	AATAAA	-20
PB.9707.5	chr6	+	7482	15	full-splice_match	PRPF4B	ENST00000337659.10	4415	15	8	-3075	8	0	multi-exon	FALSE	canonical	1	161868	junction_14	121393.04548005815	NA	1	NA	TRUE	NA	NA	NA	C	coding	1007	3024	93	3116	10.0	-81	True	AATAAA	-18
PB.4660.7	chr17	-	3945	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1048	195	-2	-195	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	33	2447	90.0	-6	True	NA	NA
PB.3098.2	chr13	-	2907	7	full-splice_match	N4BP2L2	ENST00000505213.5	2343	7	38	-602	-3	602	multi-exon	FALSE	canonical	1	50237	junction_1	225197.56930945965	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2727	179	2905	75.0	-4	True	NA	NA
PB.11376.2	chr8	-	3262	14	full-splice_match	MROH6	ENST00000398882.7	3469	14	199	8	-24	0	multi-exon	FALSE	canonical	1	31177	junction_11	15951.486506753781	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	59	2218	20.0	-1	True	AATAAA	-14
PB.11376.3	chr8	-	1792	3	novel_in_catalog	MROH6	novel	3469	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	719	junction_2	1554.0	NA	18	2	TRUE	NA	NA	NA	C	coding	145	438	311	748	20.0	19	True	AATAAA	-14
PB.11376.1	chr8	-	2005	5	novel_in_catalog	MROH6	novel	3469	14	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	9937	junction_4	17377.39437279076	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	331	954	10.0	-1	True	AATAAA	-21
PB.9707.7	chr6	+	3578	20	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	54	0	no_combination_of_known_junctions	FALSE	canonical	1	8916	junction_15	150581.58604027398	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	47	3070	10.0	-35	True	AATAAA	-18
PB.9384.8	chr5	+	2261	19	incomplete-splice_match	WDR36	ENST00000513710.3	3140	23	27	6054	-6	-6054	3prime_fragment	FALSE	canonical	1	149231	junction_4	65590.82857457105	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2145	117	2261	45.0	-7	True	NA	NA
PB.11488.7	chr9	-	2373	6	full-splice_match	CAAP1	ENST00000625311.1	1532	6	-365	-476	-3	476	multi-exon	FALSE	canonical	1	30142	junction_5	106107.84774181408	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	682	1332	60.0	-6	True	AATAAA	-42
PB.5176.1	chr17	+	6301	16	novel_in_catalog	DDX42	novel	589	3	NA	NA	-32	-1	intron_retention	TRUE	canonical	1	397811	junction_1	186726.73688860593	NA	6	NA	TRUE	NA	NA	NA	C	coding	775	2328	3057	5384	15.0	-30	True	AGTAAA	-15
PB.87.13	chr1	+	2484	5	novel_in_catalog	TARDBP	novel	701	5	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	464468.1504298088	NA	2	1	TRUE	NA	NA	NA	C	coding	330	993	105	1097	15.0	-5	True	AATAAA	-13
PB.9707.1	chr6	+	3412	15	full-splice_match	PRPF4B	ENST00000337659.10	4415	15	0	1003	0	-1003	multi-exon	FALSE	canonical	1	161868	junction_14	121393.04548005815	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	101	3124	40.0	-89	True	CATAAA	-20
PB.10664.1	chr7	+	2322	1	novel_in_catalog	AKAP9	novel	12471	50	NA	NA	873	7878	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-8658	False	NA	NA
PB.6968.2	chr2	+	1721	5	novel_in_catalog	EEF1B2	novel	844	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	10377	junction_2	458591.21385881345	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-9	True	AATAAA	-14
PB.9707.3	chr6	+	4352	15	full-splice_match	PRPF4B	ENST00000337659.10	4415	15	55	8	55	-8	multi-exon	FALSE	canonical	1	161868	junction_14	121393.04548005815	NA	1	NA	TRUE	NA	NA	NA	C	coding	1007	3024	46	3069	30.0	-34	True	AATAAA	-12
PB.10032.2	chr6	+	3249	3	full-splice_match	AL109918.1	ENST00000643631.1	3589	3	280	60	215	4	multi-exon	FALSE	canonical	1	41327	junction_2	18697.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-6472	False	NA	NA
PB.10032.1	chr6	+	3594	2	full-splice_match	AL109918.1	ENST00000602367.2	3757	2	161	2	160	0	multi-exon	FALSE	canonical	1	78721	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-6527	False	NA	NA
PB.11488.4	chr9	-	2360	6	full-splice_match	CAAP1	ENST00000625311.1	1532	6	-39	-789	-39	-236	multi-exon	FALSE	canonical	1	30142	junction_5	106107.84774181408	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	356	1006	30.0	320	False	AATAAA	-16
PB.87.14	chr1	+	2193	7	novel_in_catalog	TARDBP	novel	701	5	NA	NA	0	-6	intron_retention	FALSE	canonical	1	9011	junction_6	385964.6463665926	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	103	1347	30.0	-5	True	AATAAA	-9
PB.6523.1	chr2	+	5527	18	full-splice_match	ANTXR1	ENST00000303714.8	5859	18	174	158	-5	-158	multi-exon	FALSE	canonical	1	296772	junction_14	99975.45801499466	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	149	1843	5.0	-5	True	AATAAA	-13
PB.6523.3	chr2	+	6139	13	novel_not_in_catalog	ANTXR1	novel	5859	18	NA	NA	9	-6	any annotated donor/acceptor	FALSE	canonical	1	9264	junction_12	155512.7621683257	NA	3	NA	TRUE	NA	NA	NA	C	coding	336	1011	135	1145	35.0	9	True	TATAAA	-11
PB.6523.2	chr2	+	2135	13	full-splice_match	ANTXR1	ENST00000409829.7	2221	13	47	39	-4	-39	multi-exon	FALSE	canonical	1	75293	junction_12	140329.64380885754	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	148	1149	25.0	-4	True	ATTAAA	-22
PB.2325.1	chr11	-	2601	1	novel_in_catalog	NECTIN1	novel	1377	8	NA	NA	1012	-47846	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	165	498	282	779	90.0	1904	False	NA	NA
PB.11125.3	chr8	+	1405	5	full-splice_match	UBE2V2	ENST00000521346.5	1322	5	-1	-82	-1	-8	multi-exon	FALSE	canonical	1	5776	junction_1	418424.46509913827	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	354	671	20.0	-13	True	AATAAA	-12
PB.11488.5	chr9	-	2509	6	full-splice_match	CAAP1	ENST00000333916.7	2791	6	20	262	3	-236	multi-exon	FALSE	canonical	1	124126	junction_5	73149.42314851157	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	70	1155	30.0	17	True	AATAAA	-16
PB.5594.1	chr19	-	4196	5	full-splice_match	GNG7	ENST00000382159.7	4208	5	11	1	11	-1	multi-exon	FALSE	canonical	1	195616	junction_2	63794.430440184195	NA	0	NA	TRUE	NA	NA	NA	A	coding	130	393	3184	3576	0.0	-5	True	AATAAA	-19
PB.3924.1	chr15	+	2280	4	incomplete-splice_match	ZNF609	ENST00000326648.4	8746	9	26	11036	26	261	3prime_fragment	FALSE	canonical	1	203996	junction_1	10295.985442016816	NA	0	NA	TRUE	NA	NA	NA	A	coding	726	2178	103	2280	80.0	NA	False	NA	NA
PB.9753.2	chr6	-	3840	10	novel_not_in_catalog	MCUR1	novel	5471	9	NA	NA	20	-187	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	161645.6670783658	NA	3	NA	TRUE	NA	NA	NA	C	coding	359	1080	120	1199	35.0	-22	True	AATAAA	-21
PB.9753.1	chr6	-	2880	10	novel_not_in_catalog	MCUR1	novel	5471	9	NA	NA	11	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	161645.6670783658	NA	3	2	TRUE	NA	NA	NA	C	coding	359	1080	129	1208	35.0	-31	True	AATAAA	-17
PB.1468.1	chr10	+	1597	1	novel_in_catalog	DNAJC9-AS1	novel	2865	4	NA	NA	-43	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	1	True	NA	NA
PB.9753.4	chr6	-	1243	9	full-splice_match	MCUR1	ENST00000379170.8	5471	9	-4	4232	-4	-1	multi-exon	FALSE	canonical	1	170754	junction_1	119312.85389156526	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	144	1223	15.0	-46	True	AATAAA	-17
PB.8660.7	chr4	-	2920	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	106	2436	106	-2436	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	192	2411	15.0	-7	True	AATAGA	-16
PB.5996.1	chr19	-	1155	9	full-splice_match	FBL	ENST00000221801.7	1160	9	5	0	5	0	multi-exon	FALSE	canonical	1	859652	junction_7	1584893.62050618	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	110	1075	10.0	-31	False	ATTAAA	-14
PB.5996.2	chr19	-	2309	8	novel_in_catalog	FBL	novel	896	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	859652	junction_6	1628883.8628665523	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	73	633	10.0	6	True	ATTAAA	-14
PB.8660.3	chr4	-	4492	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	93	877	93	-877	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	205	2424	10.0	-20	True	NA	NA
PB.8660.1	chr4	-	5363	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	98	1	98	-1	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	1	NA	TRUE	NA	NA	NA	C	coding	739	2220	200	2419	45.0	-15	True	ATTAAA	-23
PB.9072.2	chr4	-	1675	6	full-splice_match	FBXO8	ENST00000393674.6	2577	6	588	314	-9	-3	multi-exon	FALSE	canonical	1	168757	junction_3	28980.948990673165	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	276	1235	40.0	-10	True	ACTAAA	-18
PB.9072.1	chr4	-	1976	6	full-splice_match	FBXO8	ENST00000393674.6	2577	6	597	4	0	-4	multi-exon	FALSE	canonical	1	168757	junction_3	28980.948990673165	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	267	1226	25.0	-1	True	AATAAA	-24
PB.7000.1	chr2	+	2751	13	novel_in_catalog	RUFY4	novel	3568	14	NA	NA	12	1	intron_retention	FALSE	canonical	1	2129	junction_1	2177.4846663575436	NA	0	NA	TRUE	NA	NA	NA	B	coding	571	1716	508	2223	25.0	-227	False	NA	NA
PB.8660.8	chr4	-	2542	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	108	2812	108	-2812	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	190	2409	40.0	-5	True	AATAAA	-19
PB.4905.3	chr17	-	3602	9	full-splice_match	RAD51D	ENST00000586044.5	1571	9	-74	-1957	4	1366	multi-exon	FALSE	canonical	1	28744	junction_7	47574.32361037175	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	446	1075	85.0	-5	True	NA	NA
PB.4905.2	chr17	-	4398	9	full-splice_match	RAD51D	ENST00000586044.5	1571	9	-113	-2714	10	2123	multi-exon	FALSE	canonical	1	28744	junction_7	47574.32361037175	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	485	1114	50.0	-44	True	ATTAAA	-31
PB.4905.1	chr17	-	4564	10	full-splice_match	RAD51D	ENST00000345365.10	9988	10	-37	5461	-37	2123	multi-exon	FALSE	canonical	1	40374	junction_8	49010.25870414187	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	294	1280	50.0	1604	False	ATTAAA	-31
PB.4621.1	chr16	+	2168	2	full-splice_match	SPATA33	ENST00000565890.1	2368	2	195	5	-23	0	multi-exon	FALSE	canonical	1	50847	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-44	False	NA	NA
PB.4905.6	chr17	-	1774	10	full-splice_match	RAD51D	ENST00000345365.10	9988	10	-3	8217	-3	-42	multi-exon	FALSE	canonical	1	40374	junction_8	49010.25870414187	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	260	1246	20.0	-57	True	TATAAA	-17
PB.4905.5	chr17	-	2346	10	full-splice_match	RAD51D	ENST00000345365.10	9988	10	53	7589	-3	-5	multi-exon	FALSE	canonical	1	40374	junction_8	49010.25870414187	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	204	1190	35.0	-1	True	AATAAA	-12
PB.4905.4	chr17	-	3406	7	full-splice_match	RAD51D	ENST00000335858.11	1353	7	-96	-1957	-3	1366	multi-exon	FALSE	canonical	1	29387	junction_5	50438.504477124305	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	229	879	85.0	-26	True	NA	NA
PB.4818.1	chr17	+	1530	6	full-splice_match	TVP23B	ENST00000571018.5	718	6	39	-851	2	-202	multi-exon	FALSE	canonical	1	381	junction_2	100991.76573840067	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	226	585	30.0	-1	True	ATTAAA	-15
PB.4818.2	chr17	+	1773	7	full-splice_match	TVP23B	ENST00000307767.12	2064	7	289	2	-3	-2	multi-exon	FALSE	canonical	1	736	junction_6	87593.29509855318	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	11	628	25.0	13	False	NA	NA
PB.4818.3	chr17	+	2310	7	full-splice_match	TVP23B	ENST00000307767.12	2064	7	274	-520	-18	520	multi-exon	FALSE	canonical	1	736	junction_6	87593.29509855318	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	26	643	15.0	-2	True	NA	NA
PB.4818.4	chr17	+	1707	7	full-splice_match	TVP23B	ENST00000307767.12	2064	7	279	78	-13	-78	multi-exon	FALSE	canonical	1	736	junction_6	87593.29509855318	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	21	638	30.0	3	True	AATATA	-45
PB.4818.5	chr17	+	4949	7	full-splice_match	TVP23B	ENST00000307767.12	2064	7	281	-3166	-11	3166	multi-exon	FALSE	canonical	1	736	junction_6	87593.29509855318	NA	5	NA	TRUE	NA	NA	NA	C	coding	205	618	19	636	20.0	5	True	NA	NA
PB.4818.6	chr17	+	2503	7	full-splice_match	TVP23B	ENST00000476139.5	2989	7	-15	501	12	11	multi-exon	FALSE	canonical	1	71	junction_1	90078.71009782994	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	1498	1857	40.0	28	False	AATATA	-16
PB.6085.7	chr19	-	2865	23	novel_not_in_catalog	EML2	novel	2364	19	NA	NA	-19	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_7	157571.09210965096	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	75	1712	20.0	-1	True	AATAAA	-13
PB.8524.4	chr3	+	3782	24	full-splice_match	ECT2	ENST00000232458.9	4087	24	14	291	-8	-290	multi-exon	FALSE	canonical	1	185991	junction_1	83156.72836509162	NA	1	NA	TRUE	NA	NA	NA	C	coding	883	2652	185	2836	20.0	3	True	ATTAAA	-18
PB.8524.5	chr3	+	4441	26	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	1	8582	junction_2	128801.04772998703	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	467	3211	25.0	-303	False	AATAAA	-13
PB.830.3	chr1	+	2429	7	novel_in_catalog	RRNAD1	novel	1802	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	89582	junction_5	69607.07372338916	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	1103	2224	35.0	5	True	ATTAAA	-23
PB.157.7	chr1	-	2599	10	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	6	8	combination_of_known_junctions	FALSE	canonical	1	118260	junction_7	591804.3147418841	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	133	1920	40.0	-1	True	AATAAA	-34
PB.3962.4	chr15	-	2478	15	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-20	-59140	no_combination_of_known_junctions	FALSE	canonical	1	9204	junction_14	441615.51924815937	NA	0	NA	TRUE	NA	NA	NA	B	coding	282	849	697	1545	60.0	-17	True	AATAAA	-19
PB.4602.3	chr16	-	2192	9	novel_in_catalog	MVD	novel	2352	6	NA	NA	0	-1	intron_retention	TRUE	canonical	1	304452	junction_6	196916.35040417543	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	914	1603	0.0	-58	True	AATAAA	-19
PB.4602.2	chr16	-	3112	9	novel_in_catalog	MVD	novel	2352	6	NA	NA	13	0	intron_retention	FALSE	canonical	1	30056	junction_6	259816.02533379267	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	1713	2522	0.0	-34	True	AATAAA	-20
PB.4602.1	chr16	-	2993	9	novel_in_catalog	MVD	novel	2352	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	376169	junction_2	171754.72078624033	NA	2	NA	TRUE	NA	NA	NA	C	coding	269	810	1593	2402	0.0	-58	True	AATAAA	-21
PB.8524.7	chr3	+	4097	25	full-splice_match	ECT2	ENST00000540509.5	4406	25	19	290	0	-290	multi-exon	FALSE	canonical	1	28915	junction_2	116987.23115389797	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	500	3151	20.0	-300	False	ATTAAA	-18
PB.4602.7	chr16	-	2040	12	novel_in_catalog	MVD	novel	2352	6	NA	NA	-10	-5	combination_of_known_junctions	TRUE	canonical	1	5845	junction_11	302191.946507541	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	766	1455	0.0	-30	True	AATAAA	-15
PB.4602.6	chr16	-	2742	10	novel_in_catalog	MVD	novel	2352	6	NA	NA	0	-5	intron_retention	FALSE	canonical	1	30056	junction_6	247013.46507297538	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	1348	2157	0.0	-1	True	AATAAA	-15
PB.4602.5	chr16	-	1828	10	full-splice_match	MVD	ENST00000301012.7	1823	10	-9	4	-9	-4	multi-exon	FALSE	canonical	1	304452	junction_6	190476.52126530802	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	40	1242	0.0	-29	True	AATAAA	-16
PB.4602.4	chr16	-	3136	9	novel_in_catalog	MVD	novel	2352	6	NA	NA	4	-4	intron_retention	FALSE	canonical	1	304452	junction_5	185737.3538501343	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	65	1081	0.0	-54	True	AATAAA	-16
PB.4602.9	chr16	-	2127	13	novel_not_in_catalog	MVD	novel	2352	6	NA	NA	1	-6	any annotated donor/acceptor	FALSE	canonical	1	15674	junction_12	325534.2038407792	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	692	1543	0.0	-19	True	AATAAA	-14
PB.4602.8	chr16	-	1942	11	novel_in_catalog	MVD	novel	2352	6	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	1	25320	junction_6	283579.5049979635	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	53	1357	0.0	-42	True	AATAAA	-15
PB.10898.4	chr7	-	4112	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	17	740	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	111657.43446691928	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	170	2935	80.0	-6	True	NA	NA
PB.8524.1	chr3	+	4005	24	full-splice_match	ECT2	ENST00000232458.9	4087	24	81	1	0	0	multi-exon	FALSE	canonical	1	185991	junction_1	83156.72836509162	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	118	2769	25.0	37	True	AATAAA	-19
PB.535.5	chr1	-	4185	17	novel_in_catalog	TGFBR3	novel	6455	20	NA	NA	46	-1	no_combination_of_known_junctions	FALSE	canonical	1	6784	junction_16	45707.06672587505	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	318	2873	95.0	-16	False	NA	NA
PB.10898.5	chr7	-	4284	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	-21	825	combination_of_known_junctions	FALSE	canonical	1	1087	junction_1	113372.0308061445	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	231	2990	75.0	-1	True	NA	NA
PB.535.3	chr1	-	2038	6	novel_not_in_catalog	TGFBR3	novel	6455	20	NA	NA	-1201	0	any annotated donor/acceptor	FALSE	canonical	1	1364	junction_5	61885.725634915194	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	117	725	100.0	-13	True	NA	NA
PB.535.1	chr1	-	6377	17	full-splice_match	TGFBR3	ENST00000465892.6	2908	17	-89	-3380	-47	-4	multi-exon	FALSE	canonical	1	24663	junction_9	40720.254516141904	NA	1	NA	TRUE	NA	NA	NA	C	coding	850	2553	435	2987	25.0	0	True	AATAAA	-16
PB.6715.1	chr2	+	5895	17	full-splice_match	EPB41L5	ENST00000331393.8	1777	17	-42	-4076	0	2	multi-exon	FALSE	canonical	1	61956	junction_2	42242.59678315687	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	143	1660	45.0	0	True	AATAAA	-15
PB.10898.2	chr7	-	4178	9	full-splice_match	TCAF1	ENST00000479870.5	5733	9	-26	1581	17	740	multi-exon	FALSE	canonical	1	1915	junction_2	113190.33107309784	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	236	3001	80.0	-6	True	NA	NA
PB.4370.1	chr16	-	1869	1	full-splice_match	SEPHS2	ENST00000478753.4	2551	1	674	8	674	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	330	993	135	1127	40.0	365	False	NA	NA
PB.6715.2	chr2	+	6601	25	full-splice_match	EPB41L5	ENST00000263713.9	6628	25	27	0	27	0	multi-exon	FALSE	canonical	1	60072	junction_24	50267.92152927416	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	227	2389	5.0	0	True	AATAAA	-18
PB.4370.2	chr16	-	1867	1	full-splice_match	SEPHS2	ENST00000478753.4	2551	1	304	380	304	-380	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	330	993	505	1497	70.0	-5	True	ATTAAA	-26
PB.5306.1	chr17	+	8465	40	incomplete-splice_match	RNF213	ENST00000508628.6	17730	69	86437	6	-6809	-6	5prime_fragment	FALSE	canonical	1	247410	junction_4	140447.77241543887	NA	11	1	TRUE	NA	NA	NA	C	coding	2193	6582	76	6657	25.0	-9634	False	AATAAA	-17
PB.8616.1	chr3	-	3299	19	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	-38	11019	any annotated donor/acceptor	FALSE	canonical	1	1874	junction_1	447026.33357457427	NA	5	NA	TRUE	NA	NA	NA	C	coding	696	2091	119	2209	30.0	-8	True	NA	NA
PB.8616.2	chr3	-	4572	17	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-42	no_combination_of_known_junctions	FALSE	canonical	1	11355	junction_15	458046.7287576775	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	520	1956	15.0	-1	True	TATAAA	-21
PB.8616.3	chr3	-	4761	18	full-splice_match	TFRC	ENST00000420415.5	4814	18	4	49	0	-49	multi-exon	FALSE	canonical	1	17718	junction_16	448334.70084552804	NA	1	NA	TRUE	NA	NA	NA	C	coding	679	2040	113	2152	25.0	-1	True	TATAAA	-14
PB.8616.6	chr3	-	4706	17	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	14307	junction_13	557111.5331151125	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	613	2049	25.0	-1	True	AATAAA	-15
PB.8616.8	chr3	-	4396	15	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	230	junction_12	596150.6625042063	NA	4	1	TRUE	NA	NA	NA	C	coding	478	1437	303	1739	25.0	-1	True	AATAAA	-15
PB.6715.4	chr2	+	4335	17	full-splice_match	EPB41L5	ENST00000331393.8	1777	17	-42	-2516	0	-1558	multi-exon	FALSE	canonical	1	61956	junction_2	42242.59678315687	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	143	1660	30.0	0	True	AATAAA	-14
PB.10898.1	chr7	-	5729	9	full-splice_match	TCAF1	ENST00000479870.5	5733	9	4	0	4	0	multi-exon	FALSE	canonical	1	1915	junction_2	113190.33107309784	NA	2	NA	TRUE	NA	NA	NA	C	coding	921	2766	206	2971	25.0	24	True	AATAAA	-17
PB.4253.1	chr16	+	1502	1	full-splice_match	AC010654.1	ENST00000615722.1	808	1	52	-746	52	746	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-23	True	NA	NA
PB.6715.5	chr2	+	3558	25	full-splice_match	EPB41L5	ENST00000263713.9	6628	25	72	2998	0	260	multi-exon	FALSE	canonical	1	60072	junction_24	50267.92152927416	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	182	2344	30.0	0	True	AATAAA	-14
PB.5437.6	chr18	-	4803	9	novel_in_catalog	B4GALT6	novel	4427	5	NA	NA	-299	-4	combination_of_known_junctions	FALSE	canonical	1	2189	junction_8	43449.700303914644	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	445	1440	35.0	-640	False	AATATA	-8
PB.5437.7	chr18	-	4527	8	novel_in_catalog	B4GALT6	novel	4427	5	NA	NA	16	-4	no_combination_of_known_junctions	FALSE	canonical	1	6868	junction_6	45423.62495262498	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	130	1164	35.0	25	True	AATATA	-8
PB.5437.4	chr18	-	4734	9	full-splice_match	B4GALT6	ENST00000306851.9	3891	9	4	-847	4	-75	multi-exon	FALSE	canonical	1	86278	junction_8	21011.705951311404	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	294	1442	10.0	8	True	AATAAA	-23
PB.4911.8	chr17	-	3582	7	full-splice_match	SLFN13	ENST00000534689.5	3058	7	-29	-495	-8	-1	multi-exon	FALSE	canonical	1	628	junction_4	26528.08747975122	NA	3	NA	TRUE	NA	NA	NA	C	coding	579	1740	233	1972	15.0	-29	True	NA	NA
PB.4911.9	chr17	-	3994	6	full-splice_match	SLFN13	ENST00000285013.10	8469	6	73	4402	0	0	multi-exon	FALSE	canonical	1	34501	junction_5	19137.754135739127	NA	1	NA	TRUE	NA	NA	NA	C	coding	897	2694	204	2897	80.0	0	True	NA	NA
PB.8004.9	chr3	-	3144	1	novel_in_catalog	UBP1	novel	4148	16	NA	NA	4819	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1796	False	AATAAA	-19
PB.5437.1	chr18	-	4975	9	full-splice_match	B4GALT6	ENST00000306851.9	3891	9	168	-1252	16	330	multi-exon	FALSE	canonical	1	86278	junction_8	21011.705951311404	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	472	1278	25.0	25	True	AATAAA	-22
PB.8004.7	chr3	-	3760	16	novel_not_in_catalog	UBP1	novel	4148	16	NA	NA	-42	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	180850.46401881918	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	254	1768	35.0	166	False	AATAAA	-20
PB.8004.6	chr3	-	3777	17	novel_not_in_catalog	UBP1	novel	4148	16	NA	NA	33	0	any annotated donor/acceptor	FALSE	canonical	1	122	junction_16	184784.30403893167	NA	5	NA	TRUE	NA	NA	NA	C	coding	540	1623	163	1785	35.0	32	False	AATAAA	-20
PB.4911.6	chr17	-	5568	6	novel_in_catalog	SLFN13	novel	8469	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	10195	junction_4	25885.566923673894	NA	10	NA	TRUE	NA	NA	NA	C	coding	897	2694	1264	3957	15.0	0	True	NA	NA
PB.4911.7	chr17	-	5343	7	novel_in_catalog	SLFN13	novel	8469	6	NA	NA	-88922	0	intron_retention	FALSE	canonical	1	1358	junction_5	25877.53608183489	NA	4	NA	TRUE	NA	NA	NA	C	coding	897	2694	1039	3732	15.0	-1	True	NA	NA
PB.8004.3	chr3	-	3684	17	full-splice_match	UBP1	ENST00000283628.9	2074	17	111	-1721	-21	-74	multi-exon	FALSE	canonical	1	3579	junction_16	184230.62474670843	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	144	1766	20.0	-22	True	AATAAA	-14
PB.4911.1	chr17	-	6085	5	novel_in_catalog	SLFN13	novel	8469	6	NA	NA	1	4	intron_retention	FALSE	canonical	1	34501	junction_4	19386.514346318163	NA	3	NA	TRUE	NA	NA	NA	C	coding	897	2694	1777	4470	15.0	1	True	NA	NA
PB.4911.2	chr17	-	4585	7	full-splice_match	SLFN13	ENST00000526861.5	6004	7	-21	1440	-18	1	multi-exon	FALSE	canonical	1	3922	junction_4	28914.520282012094	NA	3	NA	TRUE	NA	NA	NA	C	coding	897	2694	280	2973	10.0	-39	True	NA	NA
PB.4911.3	chr17	-	4508	6	full-splice_match	SLFN13	ENST00000285013.10	8469	6	73	3888	0	0	multi-exon	FALSE	canonical	1	34501	junction_5	19137.754135739127	NA	2	NA	TRUE	NA	NA	NA	C	coding	897	2694	204	2897	15.0	0	True	NA	NA
PB.1849.5	chr11	-	3024	12	full-splice_match	UEVLD	ENST00000396197.7	4156	12	-3	1135	0	457	multi-exon	FALSE	canonical	1	93591	junction_8	14730.149795291816	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	33	1448	85.0	-6	True	NA	NA
PB.1849.4	chr11	-	3976	11	novel_in_catalog	UEVLD	novel	4156	12	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	2497	junction_4	38279.792359546576	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	28	1272	40.0	-1	True	AATAAA	-9
PB.1849.7	chr11	-	2893	11	full-splice_match	UEVLD	ENST00000543987.5	2503	11	67	-457	2	457	multi-exon	FALSE	canonical	1	28439	junction_1	32621.43618297637	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	26	1165	85.0	1	True	NA	NA
PB.1849.6	chr11	-	3023	11	full-splice_match	UEVLD	ENST00000379387.8	1848	11	-45	-1130	-4	457	multi-exon	FALSE	canonical	1	13507	junction_9	36434.425885966695	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	98	1447	85.0	-18	False	NA	NA
PB.1849.1	chr11	-	4102	12	full-splice_match	UEVLD	ENST00000396197.7	4156	12	-31	85	3	-85	multi-exon	FALSE	canonical	1	93591	junction_8	14730.149795291816	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	61	1476	35.0	2	True	ATTAAA	-15
PB.1849.3	chr11	-	4045	11	full-splice_match	UEVLD	ENST00000543987.5	2503	11	43	-1585	2	-7	multi-exon	FALSE	canonical	1	28439	junction_1	32621.43618297637	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	50	1189	40.0	13	True	AATAAA	-9
PB.1849.9	chr11	-	2823	11	full-splice_match	UEVLD	ENST00000379387.8	1848	11	-8	-967	3	294	multi-exon	FALSE	canonical	1	13507	junction_9	36434.425885966695	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	61	1410	60.0	2	True	NA	NA
PB.1849.8	chr11	-	2909	12	full-splice_match	UEVLD	ENST00000396197.7	4156	12	-51	1298	12	294	multi-exon	FALSE	canonical	1	93591	junction_8	14730.149795291816	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	81	1496	60.0	-1	True	NA	NA
PB.8165.3	chr3	+	2054	6	novel_in_catalog	GLYCTK	novel	889	5	NA	NA	-7	0	intron_retention	FALSE	canonical	1	14468	junction_1	38362.043504485	NA	0	NA	TRUE	NA	NA	NA	B	coding	192	579	89	667	5.0	-9	True	AATAAA	-18
PB.10898.8	chr7	-	4183	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	-21	724	combination_of_known_junctions	FALSE	canonical	1	1087	junction_1	113372.0308061445	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	231	2990	75.0	-1	True	NA	NA
PB.10677.1	chr7	+	683	2	full-splice_match	GNG11	ENST00000248564.5	3055	2	274	2098	274	-2098	multi-exon	FALSE	canonical	1	1298382	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-113	False	AATAAA	-14
PB.10469.2	chr7	-	2722	3	novel_in_catalog	GGCT	novel	1012	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	550624	junction_2	18627.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	121	600	25.0	-1	True	AATAAA	-14
PB.11689.2	chr9	+	2311	1	intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	100	303	799	1101	80.0	NA	False	NA	NA
PB.11537.9	chr9	-	5141	12	novel_not_in_catalog	RNF38	novel	5012	12	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	11144	junction_10	100820.78058614703	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	510	1793	30.0	351	False	AATAAA	-17
PB.7253.2	chr20	-	2711	15	novel_not_in_catalog	GGT7	novel	2642	15	NA	NA	17	-2	any annotated donor/acceptor	FALSE	canonical	1	15328	junction_10	76067.60125864952	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	966	2105	25.0	12	True	ATTAAA	-16
PB.2815.1	chr12	+	2077	3	incomplete-splice_match	SNRPF	ENST00000266735.9	1389	4	67	-139	26	139	intron_retention	FALSE	canonical	1	1080950	junction_2	974017.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	30	True	AATGAA	-23
PB.6187.10	chr19	-	4289	5	novel_not_in_catalog	ZNF83	novel	810	6	NA	NA	4	5905	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	37593.902846738325	NA	3	1	TRUE	NA	NA	NA	C	coding	641	1926	70	1995	85.0	3	True	NA	NA
PB.1834.1	chr11	-	2500	5	full-splice_match	CYP2R1	ENST00000530609.5	1882	5	-629	11	-17	-8	multi-exon	FALSE	canonical	1	14994	junction_4	64465.5124829354	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	1253	2398	60.0	-42	False	AATAAA	-13
PB.1834.3	chr11	-	2348	6	novel_not_in_catalog	CYP2R1	novel	2235	5	NA	NA	-9	-4	any annotated donor/acceptor	FALSE	canonical	1	3187	junction_5	66471.22662505935	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	1097	2242	45.0	-1	True	AATAAA	-17
PB.1834.2	chr11	-	1701	5	novel_in_catalog	CYP2R1	novel	2235	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	2312	junction_4	68902.10470433759	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	131	1591	40.0	-3	True	AATAAA	-21
PB.1834.4	chr11	-	1662	5	full-splice_match	CYP2R1	ENST00000334636.9	2235	5	-3	576	-3	-4	multi-exon	FALSE	canonical	1	10938	junction_4	65867.14652000267	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	51	1556	45.0	-28	False	AATAAA	-17
PB.489.3	chr1	+	2560	6	full-splice_match	GIPC2	ENST00000370759.3	3847	6	80	1207	80	-1207	multi-exon	FALSE	canonical	1	28261	junction_2	5922.1932086010165	NA	3	NA	TRUE	NA	NA	NA	C	coding	315	948	114	1061	20.0	16	True	AATAAA	-17
PB.489.2	chr1	+	3787	6	full-splice_match	GIPC2	ENST00000370759.3	3847	6	59	1	59	-1	multi-exon	FALSE	canonical	1	28261	junction_2	5922.1932086010165	NA	3	NA	TRUE	NA	NA	NA	C	coding	315	948	135	1082	25.0	-5	True	AGTAAA	-6
PB.5374.8	chr18	-	2882	4	full-splice_match	ZBTB14	ENST00000357006.8	3528	4	-12	658	-12	-657	multi-exon	FALSE	canonical	1	4799	junction_3	29446.213818116285	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	370	1701	35.0	102	False	ATTAAA	-13
PB.5374.9	chr18	-	2851	3	full-splice_match	ZBTB14	ENST00000400143.7	1814	3	144	-1181	-11	-657	multi-exon	FALSE	canonical	1	19616	junction_2	28652.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	339	1670	35.0	103	False	ATTAAA	-13
PB.5374.2	chr18	-	3585	3	full-splice_match	ZBTB14	ENST00000400143.7	1814	3	64	-1835	64	-3	multi-exon	FALSE	canonical	1	19616	junction_2	28652.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	443	1332	419	1750	15.0	23	False	TATAAA	-16
PB.5374.3	chr18	-	3277	3	full-splice_match	ZBTB14	ENST00000400143.7	1814	3	156	-1619	1	-219	multi-exon	FALSE	canonical	1	19616	junction_2	28652.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	327	1658	30.0	-20	True	TTTAAA	-35
PB.5374.1	chr18	-	3715	4	full-splice_match	ZBTB14	ENST00000578327.1	442	4	-380	-2893	-380	11	multi-exon	FALSE	canonical	1	11866	junction_3	26587.570145130267	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	534	1865	25.0	950	False	TATAAA	-31
PB.5374.6	chr18	-	3009	4	full-splice_match	ZBTB14	ENST00000615385.4	3350	4	-17	358	-17	-358	multi-exon	FALSE	canonical	1	4400	junction_3	29610.55939281721	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	198	1529	25.0	-26	True	ATTAAA	-16
PB.5374.7	chr18	-	2714	4	full-splice_match	ZBTB14	ENST00000615385.4	3350	4	-15	651	-15	-651	multi-exon	FALSE	canonical	1	4400	junction_3	29610.55939281721	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	196	1527	30.0	-24	True	ATTAAA	-19
PB.5374.4	chr18	-	3174	3	full-splice_match	ZBTB14	ENST00000400143.7	1814	3	120	-1480	-35	-358	multi-exon	FALSE	canonical	1	19616	junction_2	28652.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	443	1332	363	1694	25.0	79	False	ATTAAA	-16
PB.5374.5	chr18	-	3312	3	novel_in_catalog	ZBTB14	novel	3528	4	NA	NA	-377	-358	no_combination_of_known_junctions	FALSE	canonical	1	3365	junction_2	36777.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	501	1832	25.0	953	False	ATTAAA	-16
PB.11537.8	chr9	-	5223	12	full-splice_match	RNF38	ENST00000357058.7	5254	12	31	0	-20	0	multi-exon	FALSE	canonical	1	18799	junction_11	89496.58707459185	NA	4	NA	TRUE	NA	NA	NA	C	coding	427	1284	592	1875	30.0	0	True	AATAAA	-17
PB.11056.6	chr8	+	3048	14	full-splice_match	ELP3	ENST00000524103.5	1914	14	25	-1159	-2	1	multi-exon	FALSE	canonical	1	17582	junction_1	95464.60735915006	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	195	1622	30.0	-9	True	AATAAA	-17
PB.11056.5	chr8	+	2003	14	full-splice_match	ELP3	ENST00000524103.5	1914	14	10	-99	10	2	multi-exon	FALSE	canonical	1	17582	junction_1	95464.60735915006	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	210	1637	40.0	-24	True	AATAAA	-19
PB.10590.2	chr7	+	3094	8	novel_not_in_catalog	PMS2P7	novel	1336	7	NA	NA	556	58340	intron_retention	FALSE	canonical	0	0	junction_2	46.89023221899227	NA	7	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.10590.1	chr7	+	2802	6	novel_not_in_catalog	PMS2P7	novel	1336	7	NA	NA	539	2084	intron_retention	FALSE	canonical	1	153	junction_5	3170.775715814665	NA	18	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.7110.73	chr2	+	3667	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	10	0	intron_retention	FALSE	canonical	1	23820	junction_1	1002316.3065459275	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	495	1580	25.0	0	True	AATAAA	-20
PB.11056.3	chr8	+	3008	13	full-splice_match	ELP3	ENST00000537665.2	3053	13	45	0	0	0	multi-exon	FALSE	canonical	1	12742	junction_3	123626.20247128932	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	342	1583	35.0	-34	False	AATAAA	-16
PB.11056.2	chr8	+	2189	16	novel_in_catalog	ELP3	novel	545	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	8946	junction_14	114196.19542220602	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	106	1731	40.0	-36	False	AATAAA	-22
PB.10231.3	chr6	-	4822	30	full-splice_match	MAP3K5	ENST00000359015.4	5197	30	370	5	370	-5	multi-exon	FALSE	canonical	1	58551	junction_27	63262.28494893905	NA	1	NA	TRUE	NA	NA	NA	C	coding	1219	3660	457	4116	35.0	1363	False	ATTAAA	-11
PB.10466.1	chr7	-	3942	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	-17	1035	-17	-1035	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	194	829	75.0	-4	True	NA	NA
PB.10231.5	chr6	-	4790	30	novel_not_in_catalog	MAP3K5	novel	5197	30	NA	NA	-529	-1	any annotated donor/acceptor	FALSE	canonical	1	654	junction_29	72319.52491725064	NA	1	NA	TRUE	NA	NA	NA	C	coding	1219	3660	421	4080	35.0	9	True	ATTAAA	-15
PB.10231.4	chr6	-	3658	23	novel_not_in_catalog	MAP3K5	novel	5197	30	NA	NA	98311	9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	69229.33853882129	NA	5	3	TRUE	NA	NA	NA	C	coding	580	1743	13	1755	45.0	NA	False	ATTAAA	-25
PB.210.2	chr1	+	1933	15	full-splice_match	SYTL1	ENST00000616558.4	1878	15	-18	-37	1	0	multi-exon	FALSE	canonical	1	188824	junction_9	79105.66689561501	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	224	1855	30.0	-30	True	AATAAA	-16
PB.2809.2	chr12	-	3501	4	full-splice_match	TMCC3	ENST00000261226.8	5877	4	-42	2418	-42	-973	multi-exon	FALSE	canonical	1	35132	junction_3	46484.01119620475	NA	2	NA	TRUE	NA	NA	NA	A	coding	477	1434	175	1608	40.0	-48	True	AATAAA	-13
PB.10466.2	chr7	-	3621	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	15	1324	-7	-1324	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	162	797	65.0	28	True	NA	NA
PB.10836.2	chr7	+	2521	4	incomplete-splice_match	NRF1	ENST00000393232.5	3528	11	25	77358	0	-29375	3prime_fragment	FALSE	canonical	1	34311	junction_1	53137.42411479461	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	93	665	85.0	0	True	NA	NA
PB.10836.3	chr7	+	2440	11	full-splice_match	NRF1	ENST00000223190.8	2424	11	-17	1	0	-1	multi-exon	FALSE	canonical	1	67041	junction_1	32999.7208062432	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	129	1607	25.0	0	True	ATTAAA	-23
PB.10836.1	chr7	+	2543	10	incomplete-splice_match	NRF1	ENST00000393232.5	3528	11	25	28612	0	19371	3prime_fragment	FALSE	canonical	1	34311	junction_1	43273.5414460609	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	126	1454	100.0	0	True	NA	NA
PB.10466.5	chr7	-	3014	4	full-splice_match	FKBP14	ENST00000222803.9	4960	4	-15	1961	-15	1740	multi-exon	FALSE	canonical	1	134579	junction_2	25778.14131304962	NA	3	NA	TRUE	NA	NA	NA	C	coding	211	636	192	827	45.0	-2	True	AGTAAA	-15
PB.9719.20	chr6	-	1249	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	23	8397	-2	136	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	65	925	15.0	14	True	AATATA	-17
PB.9719.21	chr6	-	1157	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	9	8503	0	30	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	79	939	10.0	0	True	ATTAAA	-5
PB.11284.1	chr8	-	4617	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	30	-1790	30	324	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	737	2083	25.0	-1	True	ATTAAA	-25
PB.11224.6	chr8	+	2080	11	full-splice_match	RIPK2	ENST00000220751.4	2584	11	48	456	-11	-1	multi-exon	FALSE	canonical	1	119198	junction_1	111035.4753600848	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	267	1889	20.0	-21	True	AGTAAA	-20
PB.69.6	chr1	-	1767	12	full-splice_match	SLC2A5	ENST00000377424.8	4165	12	34	2364	34	960	multi-exon	FALSE	canonical	1	112905	junction_7	47437.57310367956	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	147	1652	15.0	11	True	AATAAA	-20
PB.882.5	chr1	+	2108	5	novel_not_in_catalog	FCRLA	novel	2341	5	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	138766.90678683986	NA	3	1	TRUE	NA	NA	NA	C	coding	366	1101	37	1137	15.0	0	True	NA	NA
PB.11056.9	chr8	+	3294	16	novel_not_in_catalog	ELP3	novel	545	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	3105	junction_7	118808.28356990378	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	68	1870	35.0	2	True	AATAAA	-15
PB.1078.1	chr1	+	2509	10	full-splice_match	MAPKAPK2	ENST00000367103.3	2961	10	450	2	450	-2	multi-exon	FALSE	canonical	1	758486	junction_1	189354.2930435555	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	23	946	10.0	-10003	False	ACTAAA	-15
PB.11284.4	chr8	-	4100	12	full-splice_match	AZIN1	ENST00000337198.9	4721	12	574	47	30	-47	multi-exon	FALSE	canonical	1	686724	junction_10	254522.01808630873	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	591	1937	25.0	-1	True	AGTAAA	-16
PB.178.10	chr1	+	2253	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	90	2003	38	-1946	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	108	869	70.0	0	True	AATAAA	-27
PB.11056.8	chr8	+	2242	16	novel_not_in_catalog	ELP3	novel	545	5	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	1	3105	junction_7	118808.28356990378	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	75	1877	40.0	-5	True	AATAAA	-18
PB.7373.2	chr20	+	2374	4	full-splice_match	RBM38	ENST00000371219.2	760	4	-151	-1463	-151	-10	multi-exon	FALSE	canonical	1	35592	junction_1	404302.4298025208	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	421	897	55.0	0	True	AATAAA	-13
PB.7373.1	chr20	+	1988	4	full-splice_match	RBM38	ENST00000356208.9	2382	4	385	9	155	-9	multi-exon	FALSE	canonical	1	612355	junction_1	133878.34676551196	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	34	510	55.0	-1417	False	AATAAA	-14
PB.7513.9	chr21	+	1430	12	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	-9	190	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	199471.29045247805	NA	0	NA	TRUE	NA	NA	NA	B	coding	462	1386	44	1429	65.0	-17	True	NA	NA
PB.2064.3	chr11	+	2084	13	full-splice_match	KAT5	ENST00000341318.8	2296	13	215	-3	3	1	multi-exon	FALSE	canonical	1	165236	junction_3	181962.0760499744	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	20	1660	25.0	-3	True	AATAAA	-18
PB.2064.2	chr11	+	1988	14	full-splice_match	KAT5	ENST00000377046.7	2237	14	250	-1	0	1	multi-exon	FALSE	canonical	1	127313	junction_1	202287.14394779567	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	23	1564	25.0	-6	True	AATAAA	-18
PB.2064.1	chr11	+	1836	13	full-splice_match	KAT5	ENST00000352980.8	2059	13	224	-1	3	1	multi-exon	TRUE	canonical	1	127313	junction_1	168232.675686809	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	27	1412	25.0	-10	True	AATAAA	-18
PB.10135.2	chr6	-	2714	1	antisense	novelGene_CRYBG1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	143	432	791	1222	30.0	-21	False	NA	NA
PB.2064.5	chr11	+	3531	13	novel_not_in_catalog	KAT5	novel	2237	14	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_12	230150.4970419718	NA	3	1	TRUE	NA	NA	NA	C	coding	346	1041	17	1057	30.0	0	True	AATAAA	-16
PB.2064.4	chr11	+	1928	12	full-splice_match	KAT5	ENST00000530446.5	1697	12	10	-241	3	1	multi-exon	FALSE	canonical	1	332203	junction_3	124951.26847000979	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	20	1504	25.0	-3	True	AATAAA	-18
PB.2518.3	chr12	+	2674	4	full-splice_match	MED21	ENST00000282892.3	1753	4	2	-923	2	-1	multi-exon	FALSE	canonical	1	353246	junction_2	54736.740387259284	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	29	463	15.0	-14	True	NA	NA
PB.2518.2	chr12	+	1746	4	full-splice_match	MED21	ENST00000282892.3	1753	4	8	-1	-4	1	multi-exon	FALSE	canonical	1	353246	junction_2	54736.740387259284	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	23	457	30.0	-8	True	ATTAAA	-18
PB.2518.1	chr12	+	2559	3	full-splice_match	MED21	ENST00000536503.5	1374	3	0	-1185	0	-3	multi-exon	FALSE	canonical	1	12573	junction_1	235991.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-16	True	NA	NA
PB.11284.7	chr8	-	4405	13	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	22	-47	combination_of_known_junctions	FALSE	canonical	1	43126	junction_7	515919.2289143557	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	1397	2242	25.0	8258	False	AGTAAA	-16
PB.2518.4	chr12	+	3799	4	full-splice_match	MED21	ENST00000282892.3	1753	4	12	-2058	0	1051	multi-exon	FALSE	canonical	1	353246	junction_2	54736.740387259284	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	19	453	65.0	-4	True	NA	NA
PB.89.12	chr1	-	2182	19	incomplete-splice_match	EXOSC10	ENST00000376936.8	2808	25	13	7328	1	342	3prime_fragment	FALSE	canonical	1	361621	junction_18	107606.9455677599	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2145	38	2182	45.0	-18	True	NA	NA
PB.89.13	chr1	-	4092	9	incomplete-splice_match	EXOSC10	ENST00000304457.11	2721	24	-3	17868	-3	-3785	3prime_fragment	FALSE	canonical	1	361621	junction_8	119731.24927311165	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	42	1181	60.0	-22	True	NA	NA
PB.89.10	chr1	-	2686	25	novel_not_in_catalog	EXOSC10	novel	2721	24	NA	NA	4	-4	any annotated donor/acceptor	FALSE	canonical	1	1212	junction_16	192192.16466360327	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	20	2593	35.0	0	True	ATTAAA	-10
PB.89.11	chr1	-	2587	23	incomplete-splice_match	EXOSC10	ENST00000376936.8	2808	25	13	2027	1	0	3prime_fragment	FALSE	canonical	1	361621	junction_22	138851.47678763606	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2550	38	2587	25.0	-18	True	AATAAA	-19
PB.89.14	chr1	-	3761	10	novel_not_in_catalog	EXOSC10	novel	2721	24	NA	NA	-7	-3785	any annotated donor/acceptor	FALSE	canonical	1	10130	junction_1	219679.60006949067	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	31	1164	60.0	-11	True	NA	NA
PB.11958.1	chrX	+	5085	17	novel_in_catalog	TBL1X	novel	5451	17	NA	NA	27	18	combination_of_known_junctions	FALSE	canonical	1	63866	junction_3	62405.87410252339	NA	42	NA	TRUE	NA	NA	NA	B	coding	526	1581	336	1916	90.0	66	False	NA	NA
PB.11958.2	chrX	+	2723	2	novel_not_in_catalog	TBL1X	novel	5451	17	NA	NA	49123	5330	intron_retention	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	NA	False	AATACA	-39
PB.7513.8	chr21	+	1994	15	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	-13	200	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	177228.03481236842	NA	0	NA	TRUE	NA	NA	NA	B	coding	649	1947	48	1994	60.0	-21	True	NA	NA
PB.1671.8	chr10	-	1904	9	full-splice_match	FAM204A	ENST00000369183.8	13889	9	-2	11987	-2	497	multi-exon	FALSE	canonical	1	191689	junction_8	52436.36621658675	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	263	964	40.0	-3	True	AATAAA	-19
PB.1671.9	chr10	-	1673	7	novel_in_catalog	FAM204A	novel	13889	9	NA	NA	-2	498	combination_of_known_junctions	FALSE	canonical	1	6617	junction_4	110750.31735394712	NA	3	NA	TRUE	NA	NA	NA	C	coding	147	444	62	505	40.0	-3	True	AATAAA	-20
PB.1671.6	chr10	-	2071	9	full-splice_match	FAM204A	ENST00000369183.8	13889	9	-4	11822	-4	662	multi-exon	FALSE	canonical	1	191689	junction_8	52436.36621658675	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	265	966	25.0	-5	True	ATTAAA	-42
PB.1671.7	chr10	-	1877	8	full-splice_match	FAM204A	ENST00000369172.8	872	8	-11	-994	-3	662	multi-exon	FALSE	canonical	1	122897	junction_7	70298.24106720493	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	2	772	25.0	-12	False	ATTAAA	-42
PB.1671.4	chr10	-	2269	8	full-splice_match	FAM204A	ENST00000369172.8	872	8	0	-1397	0	-743	multi-exon	FALSE	canonical	1	122897	junction_7	70298.24106720493	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	60	761	20.0	-1	True	NA	NA
PB.1671.5	chr10	-	2465	9	full-splice_match	FAM204A	ENST00000369183.8	13889	9	2	11422	2	-746	multi-exon	FALSE	canonical	1	191689	junction_8	52436.36621658675	NA	2	NA	TRUE	NA	NA	NA	C	coding	233	702	259	960	20.0	1	True	NA	NA
PB.1671.2	chr10	-	5726	8	full-splice_match	FAM204A	ENST00000369172.8	872	8	0	-4854	0	2714	multi-exon	FALSE	canonical	1	122897	junction_7	70298.24106720493	NA	4	NA	TRUE	NA	NA	NA	C	coding	233	702	60	761	40.0	-1	True	AATAAA	-16
PB.1671.3	chr10	-	2747	9	full-splice_match	FAM204A	ENST00000369183.8	13889	9	12	11130	7	-454	multi-exon	FALSE	canonical	1	191689	junction_8	52436.36621658675	NA	5	NA	TRUE	NA	NA	NA	C	coding	233	702	249	950	45.0	11	True	AATACA	-13
PB.5615.2	chr19	-	2153	10	novel_in_catalog	APBA3	novel	1779	8	NA	NA	1	-10	intron_retention	FALSE	canonical	1	98583	junction_7	36039.490836142446	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	1076	2017	25.0	-7	True	AGTAAA	-6
PB.1671.1	chr10	-	5932	9	full-splice_match	FAM204A	ENST00000369183.8	13889	9	-5	7962	3	2714	multi-exon	FALSE	canonical	1	191689	junction_8	52436.36621658675	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	266	967	40.0	-6	True	AATAAA	-16
PB.1085.5	chr1	+	6226	15	full-splice_match	PFKFB2	ENST00000367080.7	7094	15	-16	884	-16	-884	multi-exon	FALSE	canonical	1	89658	junction_1	21828.099713606378	NA	3	NA	TRUE	NA	NA	NA	C	coding	505	1518	141	1658	30.0	-31	True	ATTAAA	-20
PB.1085.4	chr1	+	3492	15	full-splice_match	PFKFB2	ENST00000367079.3	3494	15	-63	65	-12	-65	multi-exon	FALSE	canonical	1	32528	junction_14	32388.17204172044	NA	6	NA	TRUE	NA	NA	NA	C	coding	471	1416	137	1552	45.0	-27	True	AATAAA	-9
PB.1041.1	chr1	-	2427	2	full-splice_match	RABIF	ENST00000367262.3	2430	2	0	3	0	-3	multi-exon	FALSE	canonical	1	292511	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	38	409	30.0	-14	True	AATAAA	-17
PB.2332.34	chr11	+	2078	1	incomplete-splice_match	SORL1	ENST00000260197.11	10904	48	179392	21	2759	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	214	False	AATAAA	-18
PB.2332.33	chr11	+	2358	1	incomplete-splice_match	SORL1	ENST00000260197.11	10904	48	178932	201	2299	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-246	False	AATAAA	-27
PB.2332.32	chr11	+	2917	1	incomplete-splice_match	SORL1	ENST00000260197.11	10904	48	178553	21	1920	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-625	False	AATAAA	-18
PB.1085.3	chr1	+	7131	15	full-splice_match	PFKFB2	ENST00000367080.7	7094	15	-44	7	-44	-7	multi-exon	FALSE	canonical	1	89658	junction_1	21828.099713606378	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	169	1686	20.0	-59	False	AATAAA	-22
PB.1085.2	chr1	+	3523	15	novel_not_in_catalog	PFKFB2	novel	543	6	NA	NA	-202	-65	any annotated donor/acceptor	FALSE	canonical	1	10862	junction_1	42622.74383423929	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	168	1583	45.0	17	True	AATAAA	-9
PB.11198.3	chr8	+	4502	9	novel_in_catalog	ZC2HC1A	novel	3352	9	NA	NA	17	199	intron_retention	FALSE	canonical	1	19186	junction_7	42489.56605670974	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	86	910	35.0	-25	True	NA	NA
PB.233.1	chr1	-	2456	2	full-splice_match	TMEM200B	ENST00000521452.1	2501	2	42	3	42	3	multi-exon	FALSE	canonical	1	5493	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	307	924	59	982	5.0	9	True	AATAAA	-14
PB.4703.9	chr17	+	3292	18	full-splice_match	RABEP1	ENST00000537505.5	5365	18	-22	2095	13	494	multi-exon	FALSE	canonical	1	259749	junction_1	72525.40854407115	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	210	2798	15.0	-6	True	ATTAAA	-20
PB.4703.8	chr17	+	2373	14	incomplete-splice_match	RABEP1	ENST00000341923.10	2490	17	-217	5977	5	-1447	3prime_fragment	FALSE	canonical	1	259749	junction_1	77264.94629336109	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2154	218	2371	65.0	-14	True	NA	NA
PB.3341.1	chr14	-	2546	1	full-splice_match	EMC9	ENST00000558045.2	565	1	-1982	1	-18	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	103	312	202	513	35.0	4	True	AATAAA	-20
PB.10999.41	chr8	+	6485	40	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	1	45228	junction_24	239392.24028685264	NA	0	NA	TRUE	NA	NA	NA	C	coding	2035	6108	285	6392	30.0	2	True	AATAAA	-23
PB.4703.3	chr17	+	4231	18	full-splice_match	RABEP1	ENST00000537505.5	5365	18	-16	1150	-16	-1150	multi-exon	FALSE	canonical	1	259749	junction_1	72525.40854407115	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	204	2792	15.0	0	True	NA	NA
PB.4703.2	chr17	+	3512	19	novel_not_in_catalog	AC087500.1	novel	1691	8	NA	NA	11598	135650	any annotated donor/acceptor	FALSE	canonical	1	2926	junction_2	150911.0349495157	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	449	3016	20.0	0	True	ATTAAA	-22
PB.4703.1	chr17	+	5642	19	novel_not_in_catalog	AC087500.1	novel	1691	8	NA	NA	11558	137740	any annotated donor/acceptor	FALSE	canonical	1	2926	junction_2	150911.0349495157	NA	5	NA	TRUE	NA	NA	NA	B	coding	855	2568	489	3056	10.0	-40	True	ATTAAA	-17
PB.11244.15	chr8	+	3162	26	novel_in_catalog	INTS8	novel	735	6	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	8386	junction_22	135851.98556172228	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	145	3081	35.0	-8	True	AATAAA	-31
PB.4703.7	chr17	+	3372	19	novel_in_catalog	RABEP1	novel	551	3	NA	NA	2	497	combination_of_known_junctions	FALSE	canonical	1	17642	junction_9	150501.2076190835	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	221	2875	20.0	-17	True	ATTAAA	-23
PB.4703.6	chr17	+	2466	15	incomplete-splice_match	RABEP1	ENST00000341923.10	2490	17	-221	5017	1	-487	3prime_fragment	FALSE	canonical	1	259749	junction_1	74872.71156398623	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	222	2465	70.0	-18	True	NA	NA
PB.4703.5	chr17	+	5390	18	full-splice_match	RABEP1	ENST00000537505.5	5365	18	-28	3	7	-3	multi-exon	FALSE	canonical	1	259749	junction_1	72525.40854407115	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	216	2804	10.0	-12	True	ATTAAA	-17
PB.4703.4	chr17	+	5298	17	full-splice_match	RABEP1	ENST00000341923.10	2490	17	-222	-2586	0	-3	multi-exon	FALSE	canonical	1	11367	junction_15	127300.49375763434	NA	5	NA	TRUE	NA	NA	NA	C	coding	829	2490	223	2712	10.0	-19	True	ATTAAA	-17
PB.4984.10	chr17	-	2968	13	novel_not_in_catalog	DHX58	novel	782	3	NA	NA	0	-7	intron_retention	FALSE	canonical	1	3038	junction_2	30220.105058438425	NA	1	NA	TRUE	NA	NA	NA	C	coding	671	2016	603	2618	25.0	0	True	NA	NA
PB.4984.11	chr17	-	2607	14	novel_not_in_catalog	DHX58	novel	782	3	NA	NA	33	-8	any annotated donor/acceptor	FALSE	canonical	1	986	junction_3	37747.29819447014	NA	4	NA	TRUE	NA	NA	NA	C	coding	604	1815	173	1987	30.0	33	True	NA	NA
PB.5609.1	chr19	+	4039	10	full-splice_match	NFIC	ENST00000395111.7	1755	10	-33	-2251	-33	2138	multi-exon	FALSE	canonical	1	85871	junction_1	241113.59557675428	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	70	1362	90.0	-16	True	NA	NA
PB.4682.8	chr17	+	2059	10	novel_not_in_catalog	ARRB2	novel	1895	15	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_5	369747.28574631276	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	71	511	10.0	-30	True	AATAAA	-14
PB.10946.14	chr7	+	2514	3	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	9769	junction_2	277715.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	218	532	20.0	0	True	ATTAAA	-12
PB.5609.6	chr19	+	3979	10	full-splice_match	NFIC	ENST00000590282.5	1558	10	2	-2423	-1	2068	multi-exon	FALSE	canonical	1	204127	junction_8	205398.37170727522	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	53	1372	85.0	1	True	NA	NA
PB.5609.5	chr19	+	3970	9	full-splice_match	NFIC	ENST00000341919.7	1573	9	29	-2426	-5	2138	multi-exon	FALSE	canonical	1	145521	junction_8	224816.01138430956	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	60	1346	90.0	-6	True	NA	NA
PB.5609.4	chr19	+	3822	10	full-splice_match	NFIC	ENST00000590282.5	1558	10	-13	-2251	-13	1896	multi-exon	FALSE	canonical	1	204127	junction_8	205398.37170727522	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	68	1387	100.0	-60	False	NA	NA
PB.2012.4	chr11	+	4024	8	full-splice_match	RTN3	ENST00000339997.8	4886	8	17	845	0	-43	multi-exon	FALSE	canonical	1	5191	junction_1	221328.85151202642	NA	2	NA	TRUE	NA	NA	NA	C	coding	1013	3042	138	3179	45.0	0	True	AATAAA	-24
PB.2012.5	chr11	+	2414	7	full-splice_match	RTN3	ENST00000537981.5	2532	7	98	20	25	-17	multi-exon	FALSE	canonical	1	112406	junction_5	212785.71927835184	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	40	750	85.0	-2376	False	NA	NA
PB.2012.6	chr11	+	2448	8	novel_not_in_catalog	RTN3	novel	2524	6	NA	NA	2	-17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	240347.68063726823	NA	5	NA	TRUE	NA	NA	NA	C	coding	102	309	476	784	85.0	2	True	NA	NA
PB.9874.34	chr6	-	3576	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	-13	-12	combination_of_known_junctions	FALSE	canonical	1	10109	junction_24	544252.5097690306	NA	0	NA	TRUE	NA	NA	NA	C	coding	1126	3381	106	3486	10.0	-6	True	AATAAA	-18
PB.4682.7	chr17	+	1754	15	novel_not_in_catalog	ARRB2	novel	1895	15	NA	NA	5	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	386225.86571250303	NA	3	NA	TRUE	NA	NA	NA	C	coding	356	1071	190	1260	20.0	-34	True	AATAAA	-10
PB.2012.1	chr11	+	4873	8	full-splice_match	RTN3	ENST00000339997.8	4886	8	-13	26	-4	-17	multi-exon	FALSE	canonical	1	5191	junction_1	221328.85151202642	NA	2	NA	TRUE	NA	NA	NA	C	coding	1013	3042	168	3209	85.0	0	True	NA	NA
PB.2012.2	chr11	+	2483	6	full-splice_match	RTN3	ENST00000341307.6	2524	6	24	17	-4	-17	multi-exon	FALSE	canonical	1	59878	junction_5	245969.82615076995	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	168	893	85.0	0	True	NA	NA
PB.2012.3	chr11	+	1599	7	full-splice_match	RTN3	ENST00000537981.5	2532	7	114	819	41	-23	multi-exon	FALSE	canonical	1	112406	junction_5	212785.71927835184	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	24	734	20.0	3	True	AATAAA	-44
PB.1236.6	chr1	-	5300	14	full-splice_match	AKT3	ENST00000366539.5	5127	14	-175	2	-175	-2	multi-exon	FALSE	canonical	1	39478	junction_13	72730.13071200007	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	377	1816	10.0	-61	True	AATAAA	-18
PB.1173.4	chr1	+	2882	2	incomplete-splice_match	SNAP47	ENST00000480897.5	2375	3	134	0	16	0	intron_retention	FALSE	canonical	1	11717	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-13	True	NA	NA
PB.7342.29	chr20	-	2863	13	full-splice_match	STAU1	ENST00000360426.8	3211	13	0	348	0	-348	multi-exon	FALSE	canonical	1	333209	junction_3	235513.9006201238	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	366	1856	25.0	-1	True	ATTAAA	-18
PB.7126.9	chr20	-	3626	8	full-splice_match	TBC1D20	ENST00000354200.4	4466	8	35	805	13	-2	multi-exon	FALSE	canonical	1	147269	junction_7	85831.24047091193	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	114	1325	20.0	-3	True	AATAAA	-19
PB.7126.8	chr20	-	3807	7	full-splice_match	TBC1D20	ENST00000494633.1	3820	7	11	2	-1	-2	multi-exon	FALSE	canonical	1	147269	junction_6	92196.61850707373	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	838	1506	20.0	-17	True	AATAAA	-19
PB.7126.7	chr20	-	5020	6	novel_in_catalog	TBC1D20	novel	5195	3	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	147269	junction_5	100612.99949092066	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	2251	2718	15.0	-31	True	AATAAA	-20
PB.7126.6	chr20	-	2685	9	incomplete-splice_match	TBC1D20	ENST00000461304.5	2024	10	5	803	5	0	3prime_fragment	FALSE	canonical	1	72086	junction_1	110674.14115631302	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	122	1333	10.0	-11	True	AATAAA	-21
PB.7342.20	chr20	-	3129	14	full-splice_match	STAU1	ENST00000340954.11	3334	14	202	3	202	-3	multi-exon	FALSE	canonical	1	36478	junction_13	322914.19908390526	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	287	1777	30.0	325	False	AATAAA	-11
PB.7126.4	chr20	-	3468	7	novel_in_catalog	TBC1D20	novel	5195	3	NA	NA	4	5	intron_retention	FALSE	canonical	1	10987	junction_6	135077.64129288757	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	135	1160	5.0	-24	True	AATAAA	-26
PB.7126.3	chr20	-	4265	7	novel_in_catalog	TBC1D20	novel	5195	3	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	10987	junction_6	135077.64129288757	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	142	1167	35.0	-31	True	NA	NA
PB.7126.2	chr20	-	3487	9	novel_in_catalog	TBC1D20	novel	5195	3	NA	NA	0	-6	intron_retention	FALSE	canonical	1	72086	junction_1	110674.14115631302	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	127	1338	25.0	-16	True	NA	NA
PB.7126.1	chr20	-	4458	8	full-splice_match	TBC1D20	ENST00000354200.4	4466	8	7	1	-3	-1	multi-exon	FALSE	canonical	1	147269	junction_7	85831.24047091193	NA	2	NA	TRUE	NA	NA	NA	C	coding	403	1212	142	1353	15.0	-31	True	NA	NA
PB.8497.15	chr3	+	1917	12	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	347	15463	0	-3	3prime_fragment	FALSE	canonical	1	293192	junction_1	173625.33479191136	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1812	105	1916	55.0	1	True	AATGAA	-36
PB.11790.14	chr9	+	4959	27	novel_not_in_catalog	GAPVD1	novel	3720	16	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_1	84638.16042932092	NA	1	NA	TRUE	NA	NA	NA	C	coding	1460	4383	298	4680	75.0	-7	True	AAAAAG	-31
PB.11790.15	chr9	+	3349	19	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-6	0	intron_retention	TRUE	canonical	1	5767	junction_2	91157.08455249712	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2979	369	3347	80.0	-3	True	NA	NA
PB.11790.16	chr9	+	5608	27	full-splice_match	GAPVD1	ENST00000394105.6	5207	27	-9	-392	-6	392	multi-exon	FALSE	canonical	1	21691	junction_13	86526.15234235022	NA	0	NA	TRUE	NA	NA	NA	C	coding	1487	4464	170	4633	40.0	-3	True	AATATA	-35
PB.746.21	chr1	-	3575	13	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	20640	junction_1	238373.07205227457	NA	9	NA	TRUE	NA	NA	NA	C	coding	822	2469	388	2856	15.0	-28	True	AATAAA	-14
PB.2233.11	chr11	+	1644	1	full-splice_match	SRSF8	ENST00000587424.2	4028	1	280	2104	280	32	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	34	105	495	599	25.0	-77	True	AATAAA	-19
PB.2233.10	chr11	+	1899	2	novel_not_in_catalog	SRSF8	novel	560	2	NA	NA	314	417	any annotated donor/acceptor	FALSE	canonical	1	19550	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	34	105	461	565	30.0	-43	True	AATAAA	-18
PB.2233.13	chr11	+	3287	2	full-splice_match	SRSF8	ENST00000638426.1	560	2	-591	-2136	270	0	multi-exon	FALSE	canonical	1	164974	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	34	105	505	609	15.0	-87	True	NA	NA
PB.2233.12	chr11	+	4818	1	full-splice_match	SRSF8	ENST00000587424.2	4028	1	-265	-525	-265	525	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	282	849	296	1144	10.0	-931	False	NA	NA
PB.8131.6	chr3	-	2080	11	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	4	-3	intron_retention	FALSE	canonical	1	517971	junction_10	152037.83556549335	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	159	1472	15.0	-12	True	ATTAAA	-26
PB.8131.7	chr3	-	3072	3	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	-5	0	intron_retention	FALSE	canonical	1	517971	junction_2	238856.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	120	363	2110	2472	10.0	-9	True	ATTAAA	-18
PB.8131.4	chr3	-	1794	12	full-splice_match	IFRD2	ENST00000417626.6	2109	12	313	2	107	-2	multi-exon	FALSE	canonical	1	517971	junction_11	145477.28610654525	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	9	1337	15.0	-3	True	ATTAAA	-27
PB.8131.5	chr3	-	2022	11	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	517971	junction_10	145903.967839946	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	154	795	15.0	-7	True	ATTAAA	-27
PB.4217.11	chr16	+	2718	12	novel_not_in_catalog	DNAJA3	novel	2294	9	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1227	junction_7	225177.22297612534	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	14	1051	20.0	1	True	AAAAAG	-13
PB.4217.10	chr16	+	1931	13	novel_in_catalog	DNAJA3	novel	2294	9	NA	NA	0	-59	combination_of_known_junctions	FALSE	canonical	1	8137	junction_12	208264.96847584101	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	15	1457	40.0	0	True	AATAAA	-30
PB.8131.1	chr3	-	2418	9	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	517971	junction_8	131427.18000326026	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	147	788	15.0	0	True	ATTAAA	-27
PB.9534.8	chr5	-	2179	6	novel_in_catalog	GNPDA1	novel	980	7	NA	NA	-6	1	no_combination_of_known_junctions	TRUE	canonical	1	5984	junction_4	231002.04542557627	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	60	827	35.0	3151	False	ATTAAA	-13
PB.3658.9	chr14	-	1407	9	full-splice_match	SETD3	ENST00000329331.7	1330	9	-79	2	-7	-1	multi-exon	FALSE	canonical	1	34605	junction_1	178637.1361405573	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	149	1039	10.0	-9	True	NA	NA
PB.3658.8	chr14	-	4113	8	full-splice_match	SETD3	ENST00000436070.6	2592	8	-47	-1474	0	0	multi-exon	FALSE	canonical	1	275078	junction_7	99336.91877850935	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	119	997	10.0	21	True	NA	NA
PB.6307.10	chr2	+	3146	1	novel_in_catalog	TAF1B	novel	2387	15	NA	NA	-12906	-2139	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	59	NA	NA	NA	NA	NA	C	coding	443	1332	1253	2584	65.0	NA	False	NA	NA
PB.3658.3	chr14	-	2689	11	novel_in_catalog	SETD3	novel	2878	13	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	15260	junction_5	169679.797073311	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	150	1760	20.0	-10	True	ATTAAA	-15
PB.3819.1	chr15	-	6070	6	novel_in_catalog	ZSCAN29	novel	5595	5	NA	NA	-30	0	intron_retention	FALSE	canonical	1	59595	junction_5	19112.955246115132	NA	4	NA	TRUE	NA	NA	NA	B	coding	851	2556	614	3169	10.0	-13	True	NA	NA
PB.3658.1	chr14	-	2792	13	full-splice_match	SETD3	ENST00000331768.9	2878	13	86	0	-3	0	multi-exon	FALSE	canonical	1	275078	junction_12	90437.31663987401	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	75	1859	5.0	-4	True	ATTAAA	-19
PB.3819.3	chr15	-	5863	6	novel_in_catalog	ZSCAN29	novel	5595	5	NA	NA	-27	-204	intron_retention	FALSE	canonical	1	59595	junction_5	19112.955246115132	NA	1	NA	TRUE	NA	NA	NA	B	coding	851	2556	611	3166	75.0	-10	True	NA	NA
PB.3819.4	chr15	-	2724	4	novel_not_in_catalog	ZSCAN29	novel	5595	5	NA	NA	-5	2870	intron_retention	FALSE	non_canonical	0	0	junction_1	43960.14419398048	NA	1	NA	TRUE	NA	NA	NA	B	coding	176	531	589	1119	10.0	12	True	AATAAA	-16
PB.3658.6	chr14	-	2513	13	full-splice_match	SETD3	ENST00000331768.9	2878	13	-41	406	-31	317	multi-exon	FALSE	canonical	1	275078	junction_12	90437.31663987401	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	202	1986	50.0	357	False	NA	NA
PB.3658.5	chr14	-	2585	13	full-splice_match	SETD3	ENST00000331768.9	2878	13	-9	302	1	-302	multi-exon	FALSE	canonical	1	275078	junction_12	90437.31663987401	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	170	1954	25.0	-30	True	NA	NA
PB.9484.1	chr5	+	1449	4	full-splice_match	PAIP2	ENST00000265192.8	1459	4	27	-17	2	-5	multi-exon	FALSE	canonical	1	1867745	junction_1	289080.8380832062	NA	1	NA	TRUE	NA	NA	NA	A	coding	127	384	149	532	20.0	-3	True	AATAAA	-14
PB.10298.9	chr6	+	4197	6	incomplete-splice_match	ARID1B	ENST00000636940.1	5910	11	17260	-340	-3435	-117	5prime_fragment	FALSE	canonical	1	199305	junction_3	35018.53897923213	NA	10	NA	TRUE	NA	NA	NA	B	coding	996	2991	73	3063	80.0	-8608	False	NA	NA
PB.7647.3	chr22	+	3994	11	novel_not_in_catalog	RAB36	novel	3828	11	NA	NA	262	-11	any annotated donor/acceptor	FALSE	canonical	1	10184	junction_1	11693.061790651753	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	416	1219	25.0	96	False	NA	NA
PB.7647.2	chr22	+	3770	12	novel_not_in_catalog	RAB36	novel	3828	11	NA	NA	83	-7	any annotated donor/acceptor	FALSE	canonical	1	1697	junction_1	14987.014839023945	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	35	991	20.0	-83	False	NA	NA
PB.7647.1	chr22	+	3707	11	full-splice_match	RAB36	ENST00000263116.6	3828	11	115	6	75	-6	multi-exon	TRUE	canonical	1	19805	junction_1	9713.45117092787	NA	3	NA	TRUE	NA	NA	NA	C	coding	294	885	43	927	20.0	-91	False	NA	NA
PB.10102.17	chr6	-	2487	16	full-splice_match	RNGTT	ENST00000369485.8	4553	16	85	1981	-75	466	multi-exon	FALSE	canonical	1	124765	junction_14	22194.7096965821	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	228	2021	25.0	-19	False	ATTAAA	-18
PB.5251.1	chr17	-	4109	18	novel_in_catalog	RECQL5	novel	1176	4	NA	NA	8	1	intron_retention	TRUE	canonical	1	113166	junction_17	26852.875946444834	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	153	2255	15.0	-1	True	NA	NA
PB.851.6	chr1	+	2503	18	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	-12	-206	combination_of_known_junctions	FALSE	canonical	1	12082	junction_11	356376.9104099223	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	24	1211	0.0	-8320	False	AATAAA	-9
PB.5251.3	chr17	-	3815	18	novel_in_catalog	RECQL5	novel	1176	4	NA	NA	8	0	intron_retention	FALSE	canonical	1	3027	junction_16	47340.52591852159	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	424	2133	15.0	-1	True	AATAAA	-45
PB.5251.4	chr17	-	3721	20	full-splice_match	RECQL5	ENST00000317905.9	3704	20	-8	-9	-8	0	multi-exon	FALSE	canonical	1	113166	junction_19	27964.492787637075	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	169	3144	15.0	-17	True	AATAAA	-45
PB.5251.5	chr17	-	4051	20	novel_not_in_catalog	RECQL5	novel	1176	4	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	383	junction_17	57479.430182936965	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	421	2370	15.0	2	True	AATAAA	-44
PB.5251.6	chr17	-	3783	20	novel_in_catalog	RECQL5	novel	1176	4	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	34079	junction_4	40631.014148856084	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	169	3207	15.0	-17	True	AATAAA	-44
PB.851.3	chr1	+	2820	17	novel_not_in_catalog	NCSTN	novel	2936	17	NA	NA	7	-5	any annotated donor/acceptor	FALSE	canonical	1	544	junction_8	304706.2024298724	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	1146	2144	20.0	-5	True	ATTAAA	-14
PB.5251.8	chr17	-	3996	19	novel_in_catalog	RECQL5	novel	1176	4	NA	NA	2	-1	intron_retention	FALSE	canonical	1	34079	junction_4	40454.15827304094	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	159	2261	15.0	-7	True	AATAAA	-35
PB.5251.9	chr17	-	3927	19	novel_in_catalog	RECQL5	novel	1176	4	NA	NA	8	-1	intron_retention	FALSE	canonical	1	113166	junction_18	26130.387963272016	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	153	2255	15.0	-1	True	AATAAA	-35
PB.1968.1	chr11	+	3457	11	full-splice_match	TMEM132A	ENST00000005286.8	3480	11	22	1	5	-1	multi-exon	TRUE	canonical	1	158927	junction_5	110742.46096525036	NA	0	NA	TRUE	NA	NA	NA	A	coding	1024	3075	132	3206	10.0	-7249	False	AATAAA	-17
PB.4310.31	chr16	-	2213	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	canonical	1	6240	junction_1	181403.580120476	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	62	1903	15.0	21	True	AATAAA	-17
PB.851.9	chr1	+	2725	16	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	-3	-4	no_combination_of_known_junctions	FALSE	canonical	1	2548	junction_12	310286.08136621275	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	15	2048	25.0	-3	True	ATTAAA	-15
PB.4310.33	chr16	-	2889	16	novel_in_catalog	GGA2	novel	5973	17	NA	NA	-2	-787	intron_retention	FALSE	canonical	1	350013	junction_15	126679.40728282908	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	1191	2771	15.0	-3	True	NA	NA
PB.4310.32	chr16	-	2460	17	full-splice_match	GGA2	ENST00000309859.8	5973	17	0	3513	0	-370	multi-exon	FALSE	canonical	1	350013	junction_16	124237.22461080694	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	84	1925	20.0	-1	True	AAGAAA	-22
PB.783.1	chr1	+	3110	2	antisense	novelGene_PBXIP1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	611	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	A	coding	140	423	235	657	20.0	-5030	False	TATAAA	-15
PB.863.2	chr1	-	2357	9	novel_not_in_catalog	CD244	novel	2463	9	NA	NA	-31	-49	any annotated donor/acceptor	FALSE	canonical	1	3904	junction_7	24204.348645633392	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	210	632	25.0	0	True	TATAAA	-16
PB.863.1	chr1	-	2470	9	full-splice_match	CD244	ENST00000368034.8	2463	9	-54	47	-54	-47	multi-exon	FALSE	canonical	1	46351	junction_7	13919.445876183434	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	233	1330	20.0	-23	False	TATAAA	-18
PB.11861.26	chr9	+	2756	4	incomplete-splice_match	PRRC2B	ENST00000357304.8	11042	31	61327	2014	652	-2014	5prime_fragment	FALSE	canonical	1	402873	junction_3	203378.8185666235	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	15	473	10.0	NA	False	AATAAA	-19
PB.7110.27	chr2	+	3453	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2557	junction_2	1101500.752661049	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	281	1366	25.0	-40	True	AATAAA	-20
PB.9534.4	chr5	-	2572	7	novel_in_catalog	GNPDA1	novel	980	7	NA	NA	15	1	no_combination_of_known_junctions	FALSE	canonical	1	15201	junction_6	194450.98018181	NA	3	NA	TRUE	NA	NA	NA	C	coding	318	957	264	1220	35.0	3186	False	ATTAAA	-13
PB.11537.2	chr9	-	4787	11	novel_in_catalog	RNF38	novel	5012	12	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	1	10030	junction_10	82304.44495894495	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	148	1431	10.0	-10	True	AATAAA	-25
PB.9534.5	chr5	-	2261	7	full-splice_match	GNPDA1	ENST00000311337.10	2273	7	4	8	0	1	multi-exon	FALSE	canonical	1	196310	junction_6	133649.81800638148	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	40	909	35.0	-1	True	ATTAAA	-13
PB.6964.1	chr2	+	6683	16	full-splice_match	NRP2	ENST00000357118.8	3367	16	-761	-2555	-1	-3	multi-exon	FALSE	canonical	1	8177	junction_15	56811.0191490661	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	793	3498	25.0	-2	True	AATAAA	-19
PB.438.2	chr1	-	1893	9	novel_in_catalog	DAB1	novel	2668	21	NA	NA	15	-654648	no_combination_of_known_junctions	FALSE	canonical	1	41317	junction_8	70941.76424892462	NA	0	NA	TRUE	NA	NA	NA	B	coding	524	1575	73	1647	5.0	-6	True	AATAAA	-19
PB.874.4	chr1	+	1668	15	novel_in_catalog	NDUFS2	novel	681	4	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	17001	junction_11	623834.0765918688	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	18	1472	25.0	2	True	AATAAA	-24
PB.7336.10	chr20	+	5865	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-15	-963	any annotated donor/acceptor	FALSE	canonical	1	122263	junction_19	102846.95524849709	NA	3	NA	TRUE	NA	NA	NA	C	coding	1423	4272	232	4503	60.0	0	True	AATAAA	-23
PB.7067.1	chr2	+	3547	2	full-splice_match	B3GNT7	ENST00000287590.5	3706	2	157	2	157	-2	multi-exon	FALSE	canonical	1	40290	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	401	1206	105	1310	20.0	-4423	False	NA	NA
PB.10194.13	chr6	-	2462	10	full-splice_match	SERINC1	ENST00000339697.4	3137	10	8	667	8	-667	multi-exon	FALSE	canonical	1	1364046	junction_9	123703.56444109482	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	258	1439	60.0	-8	True	NA	NA
PB.7369.3	chr20	+	2216	6	novel_in_catalog	CSTF1	novel	585	2	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	77726	junction_1	171643.3229829812	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	186	1481	10.0	-2	True	ATTAAA	-15
PB.1238.1	chr1	+	4014	5	full-splice_match	DESI2	ENST00000302550.15	4208	5	188	6	-3	-6	multi-exon	FALSE	canonical	1	36468	junction_3	100973.12296101374	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	192	776	35.0	-3	True	ATTAAA	-13
PB.10194.10	chr6	-	3121	10	novel_not_in_catalog	SERINC1	novel	3137	10	NA	NA	-15	-4	any annotated donor/acceptor	FALSE	canonical	1	6746	junction_4	496557.1941193223	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	281	1435	35.0	1	True	AATAAA	-8
PB.1238.7	chr1	+	2260	5	full-splice_match	DESI2	ENST00000302550.15	4208	5	192	1756	1	1326	multi-exon	FALSE	canonical	1	36468	junction_3	100973.12296101374	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	188	772	20.0	1	True	AGTAAA	-22
PB.7110.26	chr2	+	3185	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	9768	junction_9	938382.5350394992	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	96	1097	20.0	-41	True	AATAAA	-21
PB.1238.5	chr1	+	4100	6	novel_not_in_catalog	DESI2	novel	4208	5	NA	NA	-1	-6	any annotated donor/acceptor	FALSE	canonical	1	527	junction_1	104940.64259570741	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	299	862	35.0	-24	True	ATTAAA	-13
PB.1238.4	chr1	+	2343	1	novel_in_catalog	DESI2	novel	4208	5	NA	NA	-2	-1078	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-25	True	AATAAA	-18
PB.7471.2	chr21	+	3372	1	genic	MIR155HG	novel	NA	NA	NA	NA	-1347	-11235	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-3	True	AAAAAG	-22
PB.7471.3	chr21	+	2143	3	novel_not_in_catalog	MIR155HG	novel	1600	4	NA	NA	-1323	-11235	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	657.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-6	True	AAAAAG	-22
PB.7471.1	chr21	+	2386	2	novel_not_in_catalog	MIR155HG	novel	1600	4	NA	NA	-1317	-11235	intron_retention	FALSE	canonical	1	1314	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	AAAAAG	-22
PB.7471.6	chr21	+	1689	4	full-splice_match	MIR155HG	ENST00000456917.1	1600	4	-97	8	-97	-8	multi-exon	FALSE	canonical	1	3021	junction_1	211650.61947149283	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7859	False	AATAAA	-23
PB.7471.4	chr21	+	2104	3	novel_not_in_catalog	MIR155HG	novel	1600	4	NA	NA	-1315	-11235	any annotated donor/acceptor	FALSE	canonical	1	475	junction_2	419.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	2	True	AAAAAG	-22
PB.793.1	chr1	+	1321	6	full-splice_match	SLC50A1	ENST00000368404.8	1300	6	-22	1	0	0	multi-exon	FALSE	canonical	1	507655	junction_3	99927.96617844276	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	85	750	20.0	-24	True	AATAAA	-18
PB.793.3	chr1	+	2080	4	novel_in_catalog	SLC50A1	novel	886	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	507655	junction_1	105693.58445472879	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	1375	1674	20.0	-24	True	AATAAA	-19
PB.7110.25	chr2	+	4020	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	25010	junction_5	1016204.946920991	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	1350	1934	25.0	-41	True	AATAAA	-19
PB.11115.1	chr8	-	2571	3	full-splice_match	THAP1	ENST00000254250.7	2161	3	15	-425	-5	425	multi-exon	FALSE	canonical	1	190433	junction_2	4589.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	217	858	100.0	14	True	NA	NA
PB.8771.9	chr4	+	2885	8	novel_in_catalog	OCIAD1	novel	552	7	NA	NA	8	0	intron_retention	FALSE	canonical	1	1189274	junction_1	234651.84625364636	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	1916	2401	20.0	4	True	AATAAA	-17
PB.7465.1	chr21	+	3658	3	full-splice_match	BTG3-AS1	ENST00000626994.1	552	3	-42	-3064	-42	3064	multi-exon	FALSE	canonical	1	3027	junction_2	111.0	NA	3	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-43	False	NA	NA
PB.11701.3	chr9	+	3085	13	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	2	1095	combination_of_known_junctions	FALSE	canonical	1	12476	junction_5	19349.287966371154	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	175	1671	30.0	-76	True	AATATA	-17
PB.11701.5	chr9	+	5942	13	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	11	-1670	combination_of_known_junctions	FALSE	canonical	1	12476	junction_5	19349.287966371154	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	166	1662	20.0	-67	True	AATAAA	-21
PB.4521.1	chr16	+	3934	1	full-splice_match	AC012321.1	ENST00000561622.1	1588	1	-2345	-1	-2345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	coding	111	336	250	585	20.0	-3000	False	AATAAA	-16
PB.11278.4	chr8	-	958	5	full-splice_match	ZNF706	ENST00000519882.5	959	5	11	-10	11	4	multi-exon	FALSE	canonical	1	15359	junction_4	91890.80085351308	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	514	False	AATAAA	-29
PB.4521.3	chr16	+	2059	1	full-splice_match	AC012321.1	ENST00000561622.1	1588	1	-470	-1	-470	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8467	False	AATAAA	-16
PB.4521.2	chr16	+	2358	1	full-splice_match	AC012321.1	ENST00000561622.1	1588	1	-769	-1	-769	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8766	False	AATAAA	-16
PB.8473.20	chr3	+	2052	3	full-splice_match	MBNL1	ENST00000461436.1	1681	3	-15	-356	-15	356	multi-exon	FALSE	canonical	1	107899	junction_2	211423.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-27
PB.3228.10	chr13	+	2850	2	incomplete-splice_match	MBNL2	ENST00000469707.5	2574	11	-52	113756	7	-113347	3prime_fragment	FALSE	canonical	1	320320	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-30	False	NA	NA
PB.3228.11	chr13	+	4660	8	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	25	-6	intron_retention	FALSE	canonical	1	109114	junction_6	128616.50224427276	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	816	1883	35.0	-12	False	AATAAA	-11
PB.3228.12	chr13	+	2562	8	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	26	8	intron_retention	FALSE	canonical	1	109114	junction_6	128616.50224427276	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	815	1882	65.0	-11	False	NA	NA
PB.3228.13	chr13	+	3689	7	full-splice_match	MBNL2	ENST00000343600.8	4596	7	33	874	-26	-874	multi-exon	FALSE	canonical	1	150007	junction_6	114681.99598987725	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	808	1893	40.0	-4	True	NA	NA
PB.3228.14	chr13	+	4553	7	full-splice_match	MBNL2	ENST00000343600.8	4596	7	37	6	-22	-6	multi-exon	FALSE	canonical	1	150007	junction_6	114681.99598987725	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	804	1889	35.0	0	True	AATAAA	-11
PB.3228.15	chr13	+	4297	6	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	-22	1	no_combination_of_known_junctions	FALSE	canonical	1	6181	junction_4	149860.54828673223	NA	4	NA	TRUE	NA	NA	NA	C	coding	273	822	804	1625	10.0	0	True	AATAAA	-19
PB.3228.16	chr13	+	2296	1	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	-22	-166971	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	184	555	1733	2287	100.0	0	True	NA	NA
PB.3228.17	chr13	+	2192	7	full-splice_match	MBNL2	ENST00000343600.8	4596	7	37	2367	-22	153	multi-exon	FALSE	canonical	1	150007	junction_6	114681.99598987725	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	804	1889	65.0	0	True	AATAAA	-16
PB.3228.18	chr13	+	1923	7	full-splice_match	MBNL2	ENST00000343600.8	4596	7	37	2636	-22	-116	multi-exon	FALSE	canonical	1	150007	junction_6	114681.99598987725	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	804	1889	30.0	0	True	NA	NA
PB.3228.19	chr13	+	4609	8	novel_not_in_catalog	MBNL2	novel	4487	7	NA	NA	-20	-6	intron_retention	FALSE	canonical	1	2984	junction_2	164255.64135710118	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	989	1945	35.0	2	True	AATAAA	-11
PB.9575.3	chr5	+	2397	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	249	2318	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	18	2	TRUE	NA	NA	NA	C	coding	193	582	77	658	45.0	17	True	NA	NA
PB.2851.10	chr12	-	1302	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	-37	2247	-37	31	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	272	889	25.0	-38	False	AATAAA	-18
PB.9575.5	chr5	+	1550	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	293	-1203	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	33	614	10.0	0	True	AATAAA	-14
PB.9575.4	chr5	+	1877	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	250	-1195	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	3	NA	TRUE	NA	NA	NA	C	coding	193	582	76	657	5.0	-6741	False	AATAAA	-22
PB.9575.7	chr5	+	2118	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	293	2318	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	4	NA	TRUE	NA	NA	NA	C	coding	193	582	33	614	45.0	0	True	NA	NA
PB.9575.6	chr5	+	2401	4	full-splice_match	GM2A	ENST00000357164.3	3896	4	293	1202	293	-1202	multi-exon	FALSE	canonical	1	536572	junction_1	84703.22155358411	NA	3	NA	TRUE	NA	NA	NA	C	coding	193	582	33	614	10.0	0	True	AATAAA	-15
PB.394.6	chr1	+	2734	5	full-splice_match	CMPK1	ENST00000371871.8	1212	5	105	-1627	0	-2	multi-exon	FALSE	canonical	1	22635	junction_3	511997.51449073217	NA	5	NA	TRUE	NA	NA	NA	C	coding	169	510	33	542	15.0	0	True	AATAAA	-21
PB.8462.7	chr3	-	1427	5	full-splice_match	COMMD2	ENST00000473414.5	3706	5	2	2277	-2	643	multi-exon	FALSE	canonical	1	232661	junction_4	82845.13778845141	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	54	653	30.0	-9	True	AATAAA	-19
PB.394.4	chr1	+	2762	5	full-splice_match	CMPK1	ENST00000450808.2	950	5	-98	-1714	7	-2	multi-exon	FALSE	canonical	1	7298	junction_1	717820.9618158626	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	131	670	15.0	25	True	AATAAA	-21
PB.394.5	chr1	+	2916	7	novel_not_in_catalog	CMPK1	novel	2930	6	NA	NA	-26	-2	any annotated donor/acceptor	FALSE	canonical	1	1237	junction_1	732108.4787713423	NA	9	NA	TRUE	NA	NA	NA	C	coding	180	543	282	824	15.0	-61	False	AATAAA	-21
PB.394.2	chr1	+	1845	6	full-splice_match	CMPK1	ENST00000371873.9	2930	6	112	973	-5	656	multi-exon	FALSE	canonical	1	867118	junction_1	372307.9828686997	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	38	724	45.0	-5	True	GATAAA	-16
PB.394.3	chr1	+	2849	6	novel_not_in_catalog	CMPK1	novel	2930	6	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	3702	junction_2	656652.5755266935	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	392	757	15.0	6	True	AATAAA	-21
PB.8462.6	chr3	-	1816	5	full-splice_match	COMMD2	ENST00000473414.5	3706	5	11	1879	1	1041	multi-exon	FALSE	canonical	1	232661	junction_4	82845.13778845141	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	45	644	35.0	0	True	AATAAA	-13
PB.8771.5	chr4	+	1581	10	novel_in_catalog	OCIAD1	novel	552	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	19330	junction_1	634576.6218491714	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	359	1096	20.0	-29	True	AATAAA	-18
PB.1590.4	chr10	+	4485	13	full-splice_match	ENTPD7	ENST00000370489.4	3550	13	-18	-917	-18	917	multi-exon	FALSE	canonical	1	76210	junction_5	12589.67067651317	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	197	2011	15.0	-21	True	AATATA	-20
PB.1590.5	chr10	+	3633	13	full-splice_match	ENTPD7	ENST00000370489.4	3550	13	-1	-82	-1	82	multi-exon	FALSE	canonical	1	76210	junction_5	12589.67067651317	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	180	1994	20.0	-4	True	GATAAA	-17
PB.1590.2	chr10	+	4641	13	novel_not_in_catalog	ENTPD7	novel	3550	13	NA	NA	-36	916	any annotated donor/acceptor	FALSE	canonical	1	4806	junction_1	28232.572925980963	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	354	2168	15.0	-39	True	AATATA	-19
PB.1590.3	chr10	+	3166	13	novel_not_in_catalog	ENTPD7	novel	3550	13	NA	NA	-22	-545	any annotated donor/acceptor	FALSE	canonical	1	4806	junction_1	28232.572925980963	NA	3	NA	TRUE	NA	NA	NA	C	coding	604	1815	340	2154	40.0	-25	True	AATAAA	-20
PB.1590.1	chr10	+	3057	13	full-splice_match	ENTPD7	ENST00000370489.4	3550	13	-43	536	-43	-536	multi-exon	FALSE	canonical	1	76210	junction_5	12589.67067651317	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	222	2036	40.0	-46	True	AATAAA	-29
PB.7663.5	chr22	-	3245	5	full-splice_match	GUCD1	ENST00000402766.5	865	5	-66	-2314	-9	0	multi-exon	FALSE	canonical	1	15142	junction_1	286509.6024420473	NA	12	NA	TRUE	NA	NA	NA	C	coding	137	414	201	614	25.0	-80	True	AATAAA	-16
PB.7663.4	chr22	-	3307	6	novel_not_in_catalog	GUCD1	novel	3584	6	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	24233	junction_2	279489.56357302505	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	153	743	25.0	-32	True	AATAAA	-16
PB.7790.1	chr22	+	1306	2	intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	16935	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-10	True	AATAAA	-23
PB.7663.1	chr22	-	3290	6	full-splice_match	GUCD1	ENST00000404664.7	1606	6	272	-1956	196	0	multi-exon	FALSE	canonical	1	102242	junction_5	216737.75784260573	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	124	726	25.0	271	False	AATAAA	-16
PB.7663.3	chr22	-	3383	5	novel_in_catalog	GUCD1	novel	3584	6	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	5411	junction_4	282042.7045727074	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	160	819	25.0	-64	True	AATAAA	-16
PB.7663.2	chr22	-	3460	6	full-splice_match	GUCD1	ENST00000435822.5	3613	6	149	4	4	0	multi-exon	FALSE	canonical	1	154381	junction_5	196629.1077827492	NA	3	2	TRUE	NA	NA	NA	C	coding	239	720	177	896	25.0	-56	True	AATAAA	-16
PB.12310.7	chrX	-	2716	10	novel_not_in_catalog	CD99L2	novel	4935	12	NA	NA	6	3866	any annotated donor/acceptor	FALSE	canonical	1	2371	junction_1	152224.36294861315	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	33	698	40.0	5	True	ATTAAA	-9
PB.12310.4	chrX	-	3452	9	full-splice_match	CD99L2	ENST00000466436.5	988	9	-74	-2390	3	0	multi-exon	FALSE	canonical	1	38215	junction_7	136629.21749157234	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	116	757	15.0	6	True	AATAAA	-13
PB.12310.3	chrX	-	3670	12	novel_not_in_catalog	CD99L2	novel	4935	12	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	12807	junction_10	170575.4571156072	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	AATAAA	-15
PB.12310.2	chrX	-	3818	11	novel_not_in_catalog	CD99L2	novel	4935	12	NA	NA	18696	0	any annotated donor/acceptor	FALSE	canonical	1	1454	junction_10	146322.74775304078	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	318	1121	10.0	-6872	False	AATAAA	-15
PB.12310.1	chrX	-	3674	11	full-splice_match	CD99L2	ENST00000370377.7	3604	11	-72	2	38	0	multi-exon	FALSE	canonical	1	286513	junction_9	79301.82361736707	NA	2	NA	TRUE	NA	NA	NA	C	coding	262	789	191	979	15.0	24	False	AATAAA	-13
PB.879.1	chr1	+	2253	1	full-splice_match	HSPA6	ENST00000309758.5	2371	1	0	118	0	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	643	1932	120	2051	30.0	0	True	AATAAA	-17
PB.6123.1	chr19	-	2040	12	novel_not_in_catalog	BCAT2	novel	1272	9	NA	NA	0	1	any annotated donor/acceptor	TRUE	canonical	1	2895	junction_5	240940.32402249757	NA	1	1	TRUE	NA	NA	NA	C	coding	197	594	624	1217	10.0	-1	True	AATAAA	-16
PB.8403.1	chr3	+	3153	10	full-splice_match	ACPP	ENST00000336375.9	3125	10	2	-30	0	30	multi-exon	FALSE	canonical	1	1503221	junction_8	166952.23299946057	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	89	1249	35.0	0	True	AATAAA	-45
PB.6123.3	chr19	-	1284	9	full-splice_match	BCAT2	ENST00000545387.6	1272	9	-17	5	0	-1	multi-exon	FALSE	canonical	1	71766	junction_8	188540.02896450795	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	23	925	15.0	-1	True	AATAAA	-13
PB.6123.2	chr19	-	1642	11	full-splice_match	BCAT2	ENST00000597011.5	1579	11	-17	-46	-12	1	multi-exon	TRUE	canonical	1	21429	junction_10	181669.7442849524	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	222	1280	10.0	-1	True	AATAAA	-16
PB.6123.4	chr19	-	1554	11	full-splice_match	BCAT2	ENST00000316273.10	1552	11	-10	8	-1	-8	multi-exon	FALSE	canonical	1	301359	junction_10	129285.11329909565	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	24	1202	40.0	-2	True	AATAAA	-6
PB.4535.8	chr16	-	2740	6	novel_not_in_catalog	ZNF23	novel	3020	2	NA	NA	1	9	any annotated donor/acceptor	FALSE	canonical	1	8976	junction_2	21299.402616974963	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	500	2257	65.0	-29	True	AATAAA	-10
PB.4535.2	chr16	-	2785	6	novel_not_in_catalog	ZNF23	novel	3020	2	NA	NA	0	10	any annotated donor/acceptor	FALSE	canonical	1	8976	junction_2	21608.3701338162	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	544	2301	60.0	-23	True	AATAAA	-11
PB.4535.3	chr16	-	4309	13	novel_in_catalog	ZNF23	novel	3020	2	NA	NA	-101865	9	intron_retention	FALSE	canonical	1	3719	junction_9	21025.794255707282	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	1892	3826	65.0	-21	True	AATAAA	-10
PB.11851.8	chr9	+	1968	18	full-splice_match	GPR107	ENST00000347136.10	7209	18	481	4760	-14	-719	multi-exon	FALSE	canonical	1	172831	junction_1	61384.345424410865	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	27	1685	5.0	0	True	NA	NA
PB.4535.1	chr16	-	2619	5	novel_in_catalog	ZNF23	novel	3020	2	NA	NA	-3	-10	combination_of_known_junctions	FALSE	canonical	1	17692	junction_3	21668.1867304927	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	73	2133	55.0	-27	True	AATAAA	-13
PB.4535.6	chr16	-	3191	5	novel_in_catalog	ZNF23	novel	3020	2	NA	NA	-9	9	intron_retention	FALSE	canonical	1	12000	junction_4	25346.617624448434	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	774	2708	65.0	-1	True	AATAAA	-10
PB.4535.7	chr16	-	3144	5	novel_in_catalog	ZNF23	novel	3020	2	NA	NA	-12	9	intron_retention	FALSE	canonical	1	12000	junction_4	24559.321422832512	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	601	2661	65.0	-4	True	AATAAA	-10
PB.4535.4	chr16	-	3992	10	novel_not_in_catalog	ZNF23	novel	3020	2	NA	NA	-21517	9	intron_retention	FALSE	canonical	1	276	junction_8	22859.72774753361	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	1575	3509	65.0	5	True	AATAAA	-10
PB.4535.5	chr16	-	3241	6	novel_in_catalog	ZNF23	novel	3020	2	NA	NA	-9	9	intron_retention	FALSE	canonical	1	9623	junction_3	24129.87389109193	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	824	2758	65.0	-1	True	AATAAA	-10
PB.11410.1	chr8	-	3035	5	full-splice_match	ZNF251	ENST00000292562.11	2807	5	-9	-219	-9	-3	multi-exon	FALSE	canonical	1	45266	junction_4	37606.41645633761	NA	2	NA	TRUE	NA	NA	NA	C	coding	671	2016	286	2301	15.0	5843	False	NA	NA
PB.6791.9	chr2	-	2953	3	full-splice_match	CYTIP	ENST00000462109.1	560	3	65	-2458	59	-790	multi-exon	FALSE	canonical	1	525444	junction_2	130515.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	8	310	65.0	-1	True	TTTAAA	-7
PB.8935.1	chr4	+	1935	1	antisense	novelGene_ELOVL6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	121	366	360	725	10.0	-1230	False	AATAAA	-20
PB.11741.5	chr9	+	2494	7	novel_in_catalog	RGS3	novel	4591	26	NA	NA	505	0	intron_retention	FALSE	canonical	1	30182	junction_1	146346.26250750877	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	151	1710	5.0	0	True	AATAAA	-26
PB.10393.5	chr7	+	1813	2	full-splice_match	RAC1	ENST00000495499.1	615	2	248	-1446	248	-11	multi-exon	FALSE	canonical	1	739021	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1540	False	AATAAA	-13
PB.11152.16	chr8	-	4542	23	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-13	-674	no_combination_of_known_junctions	FALSE	canonical	1	54781	junction_12	801383.721998468	NA	4	2	TRUE	NA	NA	NA	C	coding	724	2175	239	2413	20.0	-3	True	AATAAA	-17
PB.7206.9	chr20	+	3993	6	novel_not_in_catalog	GZF1	novel	4835	6	NA	NA	-1	-779	any annotated donor/acceptor	FALSE	canonical	1	36126	junction_5	38756.586070499034	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	79	2112	30.0	-1	True	AATAAA	-33
PB.7206.6	chr20	+	4855	6	full-splice_match	GZF1	ENST00000338121.9	4835	6	-24	4	-24	-4	multi-exon	FALSE	canonical	1	49432	junction_1	36344.36588853904	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	102	2237	35.0	-24	True	AATAAA	-31
PB.7206.7	chr20	+	3889	5	novel_not_in_catalog	GZF1	novel	4835	6	NA	NA	-13	-800	any annotated donor/acceptor	FALSE	canonical	1	12438	junction_2	50366.19451576623	NA	2	NA	TRUE	NA	NA	NA	C	coding	455	1368	91	1458	35.0	-13	True	AATAAA	-12
PB.7206.4	chr20	+	3529	6	full-splice_match	GZF1	ENST00000338121.9	4835	6	-14	1320	-14	-1302	multi-exon	FALSE	canonical	1	49432	junction_1	36344.36588853904	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	92	2227	10.0	-14	True	AAAAAG	-17
PB.7206.5	chr20	+	2729	6	full-splice_match	GZF1	ENST00000338121.9	4835	6	-30	2136	-30	506	multi-exon	FALSE	canonical	1	49432	junction_1	36344.36588853904	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	108	2243	15.0	-30	True	AATAAA	-24
PB.7206.2	chr20	+	2438	6	full-splice_match	GZF1	ENST00000338121.9	4835	6	-44	2441	-44	201	multi-exon	FALSE	canonical	1	49432	junction_1	36344.36588853904	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	122	2257	40.0	-684	False	TTTAAA	-11
PB.7206.3	chr20	+	3525	6	novel_not_in_catalog	GZF1	novel	4835	6	NA	NA	0	-1246	any annotated donor/acceptor	FALSE	canonical	1	36126	junction_5	38756.586070499034	NA	5	NA	TRUE	NA	NA	NA	C	coding	677	2034	78	2111	40.0	0	True	ATTAAA	-10
PB.7206.1	chr20	+	3910	6	novel_not_in_catalog	GZF1	novel	4835	6	NA	NA	-50	-911	any annotated donor/acceptor	FALSE	canonical	1	36126	junction_5	38756.586070499034	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	128	2161	55.0	-690	False	AATAAA	-12
PB.4165.1	chr16	+	2434	3	full-splice_match	GFER	ENST00000248114.6	2345	3	-91	2	-85	-2	multi-exon	FALSE	canonical	1	239266	junction_1	113661.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	205	618	98	715	10.0	0	True	AATAAA	-18
PB.10556.12	chr7	+	2152	14	full-splice_match	CCT6A	ENST00000275603.8	2719	14	155	412	100	-43	multi-exon	FALSE	canonical	1	878959	junction_13	787601.1410280501	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	65	1660	25.0	20	True	AGTAAA	-24
PB.6781.5	chr2	-	2319	6	full-splice_match	ARL5A	ENST00000295087.12	5326	6	17	2990	-3	1190	multi-exon	FALSE	canonical	1	129353	junction_4	80853.34525571592	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	296	835	60.0	-1	True	NA	NA
PB.2460.28	chr12	+	2419	8	novel_not_in_catalog	CLEC2D	novel	571	4	NA	NA	0	554	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	118535.36828047465	NA	9	1	TRUE	NA	NA	NA	C	coding	218	657	1623	2279	40.0	0	True	GATAAA	-22
PB.2460.29	chr12	+	2164	4	full-splice_match	CLEC2D	ENST00000543300.5	399	4	-18	-1747	0	731	multi-exon	FALSE	canonical	1	15605	junction_3	141923.57784933256	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1191	1847	80.0	0	True	AATAAA	-21
PB.6822.6	chr2	+	1426	14	novel_in_catalog	PPIG	novel	6368	14	NA	NA	143	-236	combination_of_known_junctions	FALSE	canonical	1	90749	junction_1	119906.44488302206	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1245	180	1424	70.0	-10	True	AGTAAA	-43
PB.11101.8	chr8	+	4322	22	full-splice_match	ADAM9	ENST00000487273.6	3839	22	-43	-440	-43	297	multi-exon	FALSE	canonical	1	478626	junction_1	220440.27360426018	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	122	2581	35.0	-30	True	ATTAAA	-17
PB.5398.8	chr18	-	2032	12	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	16575	junction_11	81036.98561808746	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	442	1635	25.0	-2	True	AATAAA	-26
PB.2460.22	chr12	+	2250	5	novel_not_in_catalog	CLEC2D	novel	571	4	NA	NA	-1	731	any annotated donor/acceptor	FALSE	canonical	1	2098	junction_4	140480.75279442198	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	1277	1933	80.0	-1	True	AATAAA	-21
PB.2460.23	chr12	+	3378	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	1717	combination_of_known_junctions	FALSE	canonical	1	10502	junction_4	131993.15425218083	NA	6	NA	TRUE	NA	NA	NA	C	coding	218	657	1419	2075	10.0	0	True	NA	NA
PB.2460.20	chr12	+	2171	5	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	555	combination_of_known_junctions	FALSE	canonical	1	39893	junction_3	115110.78068756202	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	1374	2030	35.0	-4	True	GATAAA	-23
PB.2460.21	chr12	+	1844	6	novel_in_catalog	CLEC2D	novel	571	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	39893	junction_3	109075.70181007317	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	23	391	20.0	-4	True	NA	NA
PB.2460.26	chr12	+	2578	5	incomplete-splice_match	CLEC2D	ENST00000261340.11	935	6	4	-3	0	3	intron_retention	FALSE	canonical	1	165777	junction_4	78672.03818702043	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	19	570	20.0	0	True	NA	NA
PB.2460.27	chr12	+	2374	6	full-splice_match	CLEC2D	ENST00000261340.11	935	6	4	-1443	0	755	multi-exon	FALSE	canonical	1	74366	junction_5	105211.63052628735	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	1377	2033	45.0	0	True	AATAAA	-45
PB.2460.24	chr12	+	2756	4	incomplete-splice_match	CLEC2D	ENST00000325960.11	1552	7	4	5	0	4	intron_retention	FALSE	canonical	1	39893	junction_3	131478.43275694392	NA	2	NA	TRUE	NA	NA	NA	C	coding	122	369	19	387	20.0	0	True	NA	NA
PB.2460.25	chr12	+	2676	4	incomplete-splice_match	CLEC2D	ENST00000261340.11	935	6	4	1	0	-1	intron_retention	FALSE	canonical	1	223788	junction_1	58590.779788480555	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	19	483	25.0	0	True	NA	NA
PB.9083.2	chr4	-	2576	7	full-splice_match	RWDD4	ENST00000327570.13	2590	7	12	2	-10	-2	multi-exon	FALSE	canonical	1	92	junction_1	11507.160461594724	NA	1	1	TRUE	NA	NA	NA	C	coding	187	564	215	778	25.0	1	True	AATAAA	-18
PB.1722.11	chr10	-	3087	22	full-splice_match	ADAM8	ENST00000415217.7	3077	22	-16	6	2	-6	multi-exon	FALSE	canonical	1	1319	junction_4	66480.76779441666	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	50	2278	15.0	1	True	AATAAA	-10
PB.1722.10	chr10	-	3241	23	novel_not_in_catalog	ADAM8	novel	3279	23	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	596	junction_12	65225.68114512138	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	52	2511	15.0	-1	True	AATAAA	-10
PB.9083.1	chr4	-	2470	6	novel_in_catalog	RWDD4	novel	2641	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	92	junction_1	11913.64433580254	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-20
PB.10122.1	chr6	-	1263	7	full-splice_match	COQ3	ENST00000254759.7	1335	7	-1	73	-1	-69	multi-exon	FALSE	canonical	1	114992	junction_5	26261.867353424983	NA	1	NA	TRUE	NA	NA	NA	A	coding	369	1110	27	1136	30.0	-11	True	AATAAA	-18
PB.9903.6	chr6	-	5802	12	full-splice_match	TAP2	ENST00000374897.2	5684	12	27	-145	17	140	multi-exon	FALSE	canonical	1	292242	junction_11	138122.43409124113	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	106	2166	25.0	-15	True	NA	NA
PB.8582.9	chr3	-	4031	12	novel_in_catalog	ETV5	novel	4111	13	NA	NA	-10	-8	no_combination_of_known_junctions	FALSE	canonical	1	182	junction_8	84146.24241734552	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	227	1708	15.0	-3	True	AATAAA	-25
PB.9903.4	chr6	-	2313	3	novel_in_catalog	HLA-DOB	novel	1188	6	NA	NA	-26	-6	intron_retention	FALSE	canonical	1	89841	junction_2	12746.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	217	654	124	777	45.0	-1	True	AATAAA	-11
PB.9903.5	chr6	-	2069	4	novel_in_catalog	HLA-DOB	novel	1188	6	NA	NA	-33	-6	intron_retention	FALSE	canonical	1	89841	junction_3	16948.149187710405	NA	0	NA	TRUE	NA	NA	NA	B	coding	217	654	131	784	45.0	8	False	AATAAA	-11
PB.9903.2	chr6	-	5829	2	novel_not_in_catalog	HLA-DOB	novel	1188	6	NA	NA	-7	2602	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	32	1	FALSE	NA	NA	NA	B	coding	99	300	105	404	100.0	34	False	NA	NA
PB.9903.3	chr6	-	2669	14	novel_in_catalog	HLA-DOB	novel	1188	6	NA	NA	-18297	-6	no_combination_of_known_junctions	TRUE	canonical	1	99	junction_3	241916.2887502336	NA	0	NA	TRUE	NA	NA	NA	B	coding	655	1968	116	2083	45.0	-25	True	AATAAA	-11
PB.9903.1	chr6	-	3706	4	novel_not_in_catalog	HLA-DOB	novel	1188	6	NA	NA	-11	2602	intron_retention	FALSE	non_canonical	0	0	junction_1	49467.102686757615	NA	4	NA	TRUE	NA	NA	NA	B	coding	195	588	37	624	100.0	168	False	NA	NA
PB.7550.1	chr21	+	2284	7	incomplete-splice_match	TRAPPC10	ENST00000422875.5	5267	24	75531	2	-183	-2	5prime_fragment	FALSE	canonical	1	163656	junction_4	53356.00354042229	NA	0	NA	TRUE	NA	NA	NA	A	coding	360	1083	2	1084	30.0	-1894	False	ATTAAA	-18
PB.8582.2	chr3	-	4772	13	full-splice_match	ETV5	ENST00000306376.9	4111	13	1	-662	1	662	multi-exon	FALSE	canonical	1	44807	junction_12	67385.64660758419	NA	4	NA	TRUE	NA	NA	NA	C	coding	510	1533	247	1779	15.0	-23	True	AATAAA	-33
PB.8582.3	chr3	-	3970	13	full-splice_match	ETV5	ENST00000306376.9	4111	13	131	10	18	-10	multi-exon	FALSE	canonical	1	44807	junction_12	67385.64660758419	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	117	1649	20.0	11	True	AATAAA	-23
PB.9903.8	chr6	-	5677	12	full-splice_match	TAP2	ENST00000374897.2	5684	12	11	-4	1	-1	multi-exon	FALSE	canonical	1	292242	junction_11	138122.43409124113	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	122	2182	30.0	-31	True	NA	NA
PB.10129.6	chr6	-	4198	24	full-splice_match	HACE1	ENST00000262903.8	4576	24	13	365	13	-361	multi-exon	FALSE	canonical	1	40619	junction_23	34986.15998201766	NA	3	2	TRUE	NA	NA	NA	C	coding	871	2616	379	2994	10.0	-47	True	TATAAA	-17
PB.10129.5	chr6	-	4076	23	novel_in_catalog	HACE1	novel	4576	24	NA	NA	8	-356	combination_of_known_junctions	FALSE	canonical	1	5389	junction_18	39794.348284400454	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	282	2867	10.0	-52	True	TATAAA	-22
PB.6305.9	chr2	-	3188	19	full-splice_match	ADAM17	ENST00000310823.8	4391	19	10	1193	10	-90	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	1	NA	TRUE	NA	NA	NA	C	coding	824	2475	216	2690	25.0	9	True	GATAAA	-20
PB.6305.6	chr2	-	3518	19	full-splice_match	ADAM17	ENST00000310823.8	4391	19	75	798	19	4	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	1	NA	TRUE	NA	NA	NA	C	coding	824	2475	151	2625	100.0	74	True	NA	NA
PB.6305.5	chr2	-	3720	19	full-splice_match	ADAM17	ENST00000497134.6	4413	19	4	689	4	113	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	2	NA	TRUE	NA	NA	NA	C	coding	824	2475	244	2718	75.0	5	True	NA	NA
PB.9083.4	chr4	-	2424	5	novel_in_catalog	RWDD4	novel	2641	8	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	92	junction_1	13296.300676786006	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-18
PB.6305.3	chr2	-	4871	18	novel_in_catalog	ADAM17	novel	4391	19	NA	NA	0	49	intron_retention	FALSE	canonical	1	185697	junction_14	46192.30421014105	NA	2	NA	TRUE	NA	NA	NA	C	coding	776	2331	226	2556	40.0	-1	True	TATAAA	-14
PB.6305.2	chr2	-	4310	19	full-splice_match	ADAM17	ENST00000497134.6	4413	19	1	102	1	49	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	247	2721	40.0	2	True	TATAAA	-14
PB.6305.1	chr2	-	4308	19	full-splice_match	ADAM17	ENST00000310823.8	4391	19	75	8	19	-8	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	3	NA	TRUE	NA	NA	NA	C	coding	824	2475	151	2625	50.0	74	True	AATAAA	-9
PB.1186.2	chr1	-	4759	3	full-splice_match	CCSAP	ENST00000366687.5	5089	3	329	1	329	-1	multi-exon	FALSE	canonical	1	97362	junction_2	68453.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	22	69	468	536	20.0	1089	False	AATAAA	-18
PB.6718.1	chr2	+	2127	4	novel_in_catalog	RALB	novel	558	4	NA	NA	-1	-10	no_combination_of_known_junctions	FALSE	canonical	1	4655	junction_1	390416.91211404593	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-17	True	AATAAA	-10
PB.11851.4	chr9	+	2114	14	incomplete-splice_match	GPR107	ENST00000610997.1	2813	20	-21	27805	-17	17412	3prime_fragment	FALSE	canonical	1	172831	junction_1	61493.96301932805	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	30	1379	25.0	-3	True	AATAAA	-19
PB.6781.9	chr2	-	1989	2	full-splice_match	ARL5A	ENST00000487723.1	696	2	-36	-1257	-9	1257	multi-exon	FALSE	canonical	1	6511	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	108	327	326	652	25.0	-31	True	AATAAA	-17
PB.9969.11	chr6	+	3590	21	incomplete-splice_match	CMTR1	ENST00000373451.8	4033	24	13070	-5	13070	5	5prime_fragment	FALSE	canonical	1	308743	junction_7	49285.77823822507	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	8	2224	0.0	NA	False	ATTAAA	-21
PB.5428.2	chr18	+	3185	12	full-splice_match	IMPACT	ENST00000648078.1	3203	12	36	-18	23	-1	multi-exon	FALSE	canonical	1	10410	junction_11	94965.9868454869	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	88	1086	30.0	0	True	NA	NA
PB.10663.1	chr7	+	1905	1	novel_in_catalog	AKAP9	novel	12471	50	NA	NA	-14314	-13487	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.6718.3	chr2	+	2014	4	novel_not_in_catalog	RALB	novel	558	4	NA	NA	20	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	403034.53172264143	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	4	True	AATAAA	-18
PB.10627.11	chr7	-	4142	1	novel_in_catalog	YWHAG	novel	3750	2	NA	NA	40	-28056	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	202	609	184	792	40.0	-3	True	AATAAA	-17
PB.10129.8	chr6	-	3642	23	novel_in_catalog	HACE1	novel	4576	24	NA	NA	-18	0	no_combination_of_known_junctions	FALSE	canonical	1	11807	junction_17	39437.30952544014	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	956	2902	15.0	-38	True	ATTAAA	-13
PB.7013.4	chr2	+	5081	26	novel_in_catalog	STK36	novel	4933	27	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	33835	junction_1	26263.233468984738	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	141	2087	20.0	-3	True	NA	NA
PB.7013.2	chr2	+	5183	26	novel_in_catalog	STK36	novel	4933	27	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	47322	junction_1	24860.37203821375	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	243	2189	20.0	-23	True	NA	NA
PB.7013.3	chr2	+	4791	27	full-splice_match	STK36	ENST00000440309.5	4721	27	20	-90	-5	-2	multi-exon	FALSE	canonical	1	33835	junction_1	27528.820273289108	NA	0	NA	TRUE	NA	NA	NA	C	coding	1315	3948	140	4087	20.0	-2	True	NA	NA
PB.7013.1	chr2	+	4931	27	full-splice_match	STK36	ENST00000295709.7	4933	27	0	2	0	-2	multi-exon	FALSE	canonical	1	47322	junction_1	26285.053066891265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1315	3948	280	4227	20.0	-7294	False	NA	NA
PB.2729.13	chr12	-	4883	14	novel_in_catalog	GNS	novel	4877	13	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	1922	junction_13	224090.60487652977	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	160	1590	10.0	-9	True	ATTAAA	-18
PB.2729.12	chr12	-	5119	14	novel_not_in_catalog	GNS	novel	4877	13	NA	NA	6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	236342.87352278238	NA	219	9	TRUE	NA	NA	NA	C	coding	344	1035	166	1200	10.0	-36	True	ATTAAA	-19
PB.2729.15	chr12	-	5176	15	full-splice_match	GNS	ENST00000543646.5	2164	15	0	-3012	0	-1	multi-exon	FALSE	canonical	1	1896	junction_13	280392.3198486127	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	131	1885	15.0	-1	True	ATTAAA	-16
PB.2729.16	chr12	-	5051	14	novel_not_in_catalog	GNS	novel	4877	13	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	394	junction_8	235115.05464963193	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	159	1760	15.0	-29	True	ATTAAA	-16
PB.2729.19	chr12	-	3798	14	full-splice_match	GNS	ENST00000258145.7	5122	14	20	1304	4	-1304	multi-exon	FALSE	canonical	1	420699	junction_13	133720.442984122	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	152	1810	65.0	-22	True	AATGAA	-21
PB.2729.18	chr12	-	3731	13	novel_in_catalog	GNS	novel	4877	13	NA	NA	-8	-1275	no_combination_of_known_junctions	FALSE	canonical	1	11211	junction_3	240122.30880062573	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	164	1714	20.0	-34	True	AATAAA	-23
PB.6226.1	chr19	+	1565	13	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-133	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	725908.0046616712	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1392	174	1565	15.0	-7347	False	ATTAAA	-22
PB.11516.26	chr9	-	2115	14	incomplete-splice_match	VCP	ENST00000358901.10	4370	17	619	3595	-3	89	3prime_fragment	FALSE	canonical	1	1397368	junction_13	513405.87595385074	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1836	278	2113	55.0	-6	True	NA	NA
PB.6226.7	chr19	+	1478	13	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-34	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	777038.8151309324	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1404	75	1478	15.0	-8	True	ATTAAA	-22
PB.6226.6	chr19	+	1999	13	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-26	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	725908.0046616712	NA	5	1	TRUE	NA	NA	NA	C	coding	471	1416	67	1482	15.0	0	True	ATTAAA	-22
PB.6226.5	chr19	+	2122	12	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-44	-1	any annotated donor/acceptor	FALSE	canonical	1	1953	junction_8	783972.0076334844	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	85	1476	10.0	-18	True	ATTAAA	-21
PB.6226.4	chr19	+	2438	11	novel_in_catalog	U2AF2	novel	3022	12	NA	NA	-45	0	intron_retention	FALSE	canonical	1	1128571	junction_1	476640.3196270853	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	86	1252	15.0	-19	True	ATTAAA	-22
PB.5853.7	chr19	-	3587	11	full-splice_match	SUGP2	ENST00000337018.10	3640	11	57	-4	-3	-1	multi-exon	FALSE	canonical	1	153256	junction_1	159462.26312817712	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	78	3326	5.0	14	True	AATAAA	-20
PB.9102.3	chr4	+	4173	5	full-splice_match	TLR3	ENST00000296795.7	6015	5	4	1838	1	1207	multi-exon	FALSE	canonical	1	22180	junction_2	5371.574745826404	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	101	2815	40.0	0	True	AATAAA	-19
PB.11353.1	chr8	-	4262	22	novel_in_catalog	TRAPPC9	novel	6917	23	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	80083	junction_18	68399.7468098442	NA	0	NA	TRUE	NA	NA	NA	C	coding	1139	3420	126	3545	5.0	-10	True	AATAAA	-17
PB.11353.3	chr8	-	4144	22	novel_in_catalog	TRAPPC9	novel	6917	23	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	1977	junction_19	75170.72919498131	NA	1	NA	TRUE	NA	NA	NA	C	coding	1105	3318	113	3430	5.0	3	True	AATAAA	-14
PB.11353.2	chr8	-	4296	23	full-splice_match	TRAPPC9	ENST00000438773.3	4281	23	-18	3	0	-1	multi-exon	FALSE	canonical	1	83417	junction_22	66141.88609372373	NA	0	NA	TRUE	NA	NA	NA	C	coding	1148	3447	135	3581	5.0	-19	True	AATAAA	-15
PB.9102.1	chr4	+	3044	5	full-splice_match	TLR3	ENST00000296795.7	6015	5	-2	2973	-2	72	multi-exon	FALSE	canonical	1	22180	junction_2	5371.574745826404	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	107	2821	35.0	-6	True	AATAAA	-15
PB.11851.6	chr9	+	6727	18	full-splice_match	GPR107	ENST00000347136.10	7209	18	480	2	-15	-2	multi-exon	FALSE	canonical	1	172831	junction_1	61384.345424410865	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	28	1686	20.0	-1	True	AATAAA	-14
PB.11631.19	chr9	-	2472	13	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-55	35547	-13	122	3prime_fragment	FALSE	canonical	1	143907	junction_7	96266.90517110344	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	229	2472	65.0	32	True	GATAAA	-25
PB.8151.1	chr3	+	2320	11	full-splice_match	PARP3	ENST00000398755.7	2336	11	16	0	4	0	multi-exon	FALSE	canonical	1	37492	junction_1	47894.47186064378	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	337	1938	25.0	-2	True	NA	NA
PB.11106.2	chr8	-	6073	42	novel_not_in_catalog	ANK1	novel	8237	42	NA	NA	30198	0	intron_retention	TRUE	canonical	1	110	junction_39	40345.065806981416	NA	1	NA	TRUE	NA	NA	NA	A	coding	1884	5655	16	5670	90.0	8	True	NA	NA
PB.11907.2	chr9	+	2111	2	novel_not_in_catalog	NALT1	novel	738	3	NA	NA	-45	-149	intron_retention	FALSE	canonical	1	2630	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	25	78	376	453	10.0	1	True	TATAAA	-17
PB.2993.8	chr12	-	4059	23	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	32240	junction_21	50846.75442985114	NA	1	NA	TRUE	NA	NA	NA	C	coding	1031	3096	557	3652	35.0	-1	True	AATAAA	-18
PB.2993.9	chr12	-	4247	25	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	12641	junction_21	59855.13144736712	NA	0	NA	TRUE	NA	NA	NA	C	coding	1031	3096	746	3841	40.0	-1	True	AATAAA	-17
PB.964.7	chr1	+	3272	10	full-splice_match	TOR1AIP1	ENST00000435319.8	3397	10	120	5	22	-5	multi-exon	FALSE	canonical	1	424085	junction_5	76054.63556038003	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	51	1439	25.0	5	True	AATAAA	-21
PB.964.6	chr1	+	2695	11	novel_not_in_catalog	TOR1AIP1	novel	3685	10	NA	NA	-17	1369	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	184907.18413433805	NA	2	1	TRUE	NA	NA	NA	C	coding	463	1392	90	1481	15.0	-34	True	ATTAAA	-16
PB.964.1	chr1	+	3249	9	novel_in_catalog	TOR1AIP1	novel	3685	10	NA	NA	-8	-1	no_combination_of_known_junctions	FALSE	canonical	1	3072	junction_2	187086.41362445155	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	81	1412	35.0	-25	True	AATAAA	-25
PB.964.3	chr1	+	2345	10	full-splice_match	TOR1AIP1	ENST00000528443.6	3685	10	733	607	-19	-176	multi-exon	FALSE	canonical	1	206087	junction_2	120786.56879567404	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	92	1483	60.0	-36	True	NA	NA
PB.401.2	chr1	-	5338	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	5	7	any annotated donor/acceptor	FALSE	canonical	1	28229	junction_16	160989.57882842654	NA	1	NA	TRUE	NA	NA	NA	C	coding	933	2802	93	2894	15.0	-1	True	NA	NA
PB.5419.10	chr18	+	2484	14	incomplete-splice_match	RBBP8	ENST00000399722.6	3293	19	10	28754	-5	4165	3prime_fragment	FALSE	canonical	1	48395	junction_1	77613.22250171418	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2142	342	2483	15.0	-31	True	AAAAAG	-6
PB.2993.1	chr12	-	6431	24	full-splice_match	MPHOSPH9	ENST00000606320.5	6351	24	-102	22	13	-22	multi-exon	FALSE	canonical	1	61150	junction_23	48481.17746765525	NA	3	NA	TRUE	NA	NA	NA	C	coding	1183	3552	310	3861	95.0	-56	False	GGGGCT	-23
PB.2993.2	chr12	-	6237	25	novel_in_catalog	MPHOSPH9	novel	484	3	NA	NA	-3	-22	intron_retention	FALSE	canonical	1	8601	junction_20	65182.54003298001	NA	3	1	TRUE	NA	NA	NA	C	coding	1027	3084	584	3667	95.0	1	True	GGGGCT	-23
PB.2993.3	chr12	-	6246	23	novel_in_catalog	MPHOSPH9	novel	484	3	NA	NA	4	-22	intron_retention	FALSE	canonical	1	61150	junction_22	50074.0001624249	NA	3	NA	TRUE	NA	NA	NA	C	coding	1141	3426	251	3676	95.0	3	True	GGGGCT	-23
PB.2993.4	chr12	-	5646	22	novel_in_catalog	MPHOSPH9	novel	484	3	NA	NA	1	-412	combination_of_known_junctions	FALSE	canonical	1	32240	junction_20	52517.04135903484	NA	2	NA	TRUE	NA	NA	NA	C	coding	989	2970	497	3466	35.0	30	True	ATTAAA	-15
PB.2993.5	chr12	-	4019	23	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	1	18997	junction_21	55252.62212814089	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	385	3609	40.0	-3	True	AATAAA	-21
PB.2993.6	chr12	-	3915	22	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	1	32240	junction_20	52517.04135903484	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2970	536	3505	40.0	-9	True	AATAAA	-21
PB.2993.7	chr12	-	4189	24	full-splice_match	MPHOSPH9	ENST00000606320.5	6351	24	-23	2185	-10	-1	multi-exon	FALSE	canonical	1	61150	junction_23	48481.17746765525	NA	0	NA	TRUE	NA	NA	NA	C	coding	1183	3552	231	3782	35.0	-6	True	AATAAA	-18
PB.8151.2	chr3	+	2946	10	novel_in_catalog	PARP3	novel	2472	12	NA	NA	-53	1	intron_retention	TRUE	canonical	1	31711	junction_1	51243.118250161155	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	1562	2563	25.0	12	True	NA	NA
PB.2483.21	chr12	+	4101	15	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	2766	junction_14	125225.90844517107	NA	5	1	TRUE	NA	NA	NA	C	coding	1284	3855	73	3927	25.0	31	True	AATAAA	-17
PB.2483.20	chr12	+	4025	14	novel_in_catalog	ATF7IP	novel	8878	15	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	3444	junction_5	121455.40406611764	NA	0	NA	TRUE	NA	NA	NA	C	coding	1256	3771	81	3851	25.0	23	True	AATAAA	-17
PB.10923.8	chr7	+	2121	4	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	8623	junction_2	6883.216609179816	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	10	True	AATAAA	-18
PB.6821.11	chr2	-	2398	12	novel_in_catalog	FASTKD1	novel	2967	15	NA	NA	27	-1639	combination_of_known_junctions	FALSE	canonical	1	24276	junction_10	69116.61545413455	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2097	302	2398	55.0	58	True	NA	NA
PB.6086.2	chr19	+	3450	16	novel_not_in_catalog	GIPR	novel	3289	14	NA	NA	-28	-2	any annotated donor/acceptor	FALSE	canonical	1	49	junction_8	10645.991048068543	NA	17	4	TRUE	NA	NA	NA	B	coding	162	489	1175	1663	0.0	-5	True	AATAAA	-16
PB.6086.1	chr19	+	3544	13	novel_in_catalog	GIPR	novel	3289	14	NA	NA	-54	-13	intron_retention	FALSE	canonical	1	6982	junction_2	7768.183623316042	NA	4	NA	TRUE	NA	NA	NA	B	coding	137	414	1355	1768	30.0	-31	False	AATAAA	-5
PB.11053.6	chr8	-	1842	8	full-splice_match	CCDC25	ENST00000520486.5	3586	8	13	1731	0	3	multi-exon	FALSE	canonical	1	47488	junction_5	109663.15706279658	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	253	675	35.0	-14	True	AATAAA	-26
PB.622.3	chr1	+	2045	1	genic	SLC16A1-AS1	novel	NA	NA	NA	NA	-8	-5621	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-54	True	NA	NA
PB.11053.7	chr8	-	1889	9	full-splice_match	CCDC25	ENST00000356537.8	3626	9	-3	1740	2	1	multi-exon	FALSE	canonical	1	163559	junction_2	93892.49118331762	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	98	724	35.0	-11	True	AATAAA	-24
PB.9589.1	chr5	-	2062	2	full-splice_match	MED7	ENST00000286317.5	2402	2	316	24	-93	-24	multi-exon	FALSE	canonical	1	120376	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	233	702	67	768	75.0	-5	True	NA	NA
PB.6562.6	chr2	-	4386	28	full-splice_match	DCTN1	ENST00000409567.7	4024	28	-20	-342	-20	0	multi-exon	FALSE	canonical	1	58949	junction_27	364150.205001175	NA	2	NA	TRUE	NA	NA	NA	C	coding	1253	3762	283	4044	5.0	-9	True	ATTAAA	-17
PB.6562.7	chr2	-	4209	29	novel_in_catalog	AC006030.1	novel	5059	39	NA	NA	-28491	-149554	no_combination_of_known_junctions	FALSE	canonical	1	3021	junction_27	420700.2808019224	NA	0	NA	TRUE	NA	NA	NA	B	coding	1236	3711	158	3868	0.0	-22	True	ATTAAA	-16
PB.6562.1	chr2	-	4136	28	full-splice_match	DCTN1	ENST00000409240.5	4365	28	231	-2	9	0	multi-exon	TRUE	canonical	1	427856	junction_24	312906.5367160845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1236	3711	82	3792	10.0	-10	True	ATTAAA	-19
PB.6562.2	chr2	-	4110	28	novel_not_in_catalog	AC006030.1	novel	5059	39	NA	NA	-28503	-149551	intron_retention	TRUE	non_canonical	0	0	junction_5	380631.5424394651	NA	0	NA	TRUE	NA	NA	NA	B	coding	1050	3153	106	3258	10.0	163	False	ATTAAA	-19
PB.11053.5	chr8	-	3325	9	full-splice_match	CCDC25	ENST00000356537.8	3626	9	-4	305	1	-298	multi-exon	FALSE	canonical	1	163559	junction_2	93892.49118331762	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	99	725	65.0	-12	True	ACTAAA	-20
PB.1051.3	chr1	+	4438	17	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	2	2	no_combination_of_known_junctions	FALSE	canonical	1	14050	junction_1	201599.3842714044	NA	2	NA	TRUE	NA	NA	NA	C	coding	810	2433	279	2711	30.0	39	False	AATAAA	-20
PB.11053.3	chr8	-	3528	8	full-splice_match	CCDC25	ENST00000519509.5	977	8	-7	-2544	6	0	multi-exon	FALSE	canonical	1	70684	junction_3	131424.13047015655	NA	1	NA	TRUE	NA	NA	NA	C	coding	92	279	108	386	30.0	-21	True	AATAAA	-19
PB.12106.4	chrX	+	2563	2	intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11888	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	414	1245	148	1392	85.0	-33	True	ATTAAA	-8
PB.931.3	chr1	+	1984	12	full-splice_match	PRRC2C	ENST00000476522.5	1931	12	-41	-12	-41	12	multi-exon	FALSE	canonical	1	73256	junction_4	235173.70091210073	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1701	284	1984	70.0	1	True	AAAAAG	-21
PB.12106.1	chrX	+	4296	1	full-splice_match	UBQLN2	ENST00000338222.6	4230	1	-62	-4	-62	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	624	1875	298	2172	10.0	-50	True	AATAAA	-18
PB.12106.2	chrX	+	4485	1	full-splice_match	UBQLN2	ENST00000338222.6	4230	1	-59	-196	-59	196	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	624	1875	295	2169	75.0	-47	True	NA	NA
PB.12106.3	chrX	+	2813	1	full-splice_match	UBQLN2	ENST00000338222.6	4230	1	468	949	468	-949	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	454	1365	278	1642	85.0	-1695	False	ATTAAA	-8
PB.11851.1	chr9	+	6794	19	full-splice_match	GPR107	ENST00000372410.7	6991	19	190	7	-25	-2	multi-exon	FALSE	canonical	1	42578	junction_15	101719.69641030961	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	38	1753	20.0	-11	False	AATAAA	-14
PB.8649.1	chr4	-	2010	3	incomplete-splice_match	DGKQ	ENST00000515182.1	479	5	950	-1726	950	-1	5prime_fragment	FALSE	canonical	1	100897	junction_2	7006.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	170	513	1172	1684	15.0	NA	False	AATACA	-19
PB.6514.3	chr2	+	2681	5	incomplete-splice_match	ETAA1	ENST00000272342.5	3418	6	9	5303	4	-5303	3prime_fragment	FALSE	canonical	1	89741	junction_1	24237.140006351823	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2559	122	2680	55.0	-5	True	NA	NA
PB.6514.2	chr2	+	3073	6	full-splice_match	ETAA1	ENST00000272342.5	3418	6	-3	348	-3	-348	multi-exon	FALSE	canonical	1	89741	junction_1	22533.260726313005	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	134	2914	30.0	-17	True	AATAAA	-23
PB.8502.2	chr3	-	3655	17	full-splice_match	KPNA4	ENST00000334256.8	8981	17	139	5187	122	4776	multi-exon	FALSE	canonical	1	74856	junction_9	152593.4752997732	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	168	1733	35.0	-3	True	AATAAA	-11
PB.8502.3	chr3	-	3192	17	full-splice_match	KPNA4	ENST00000334256.8	8981	17	17	5772	0	4191	multi-exon	FALSE	canonical	1	74856	junction_9	152593.4752997732	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	362	1855	35.0	-1	True	AATAAA	-35
PB.8502.4	chr3	-	1301	12	incomplete-splice_match	KPNA4	ENST00000334256.8	8981	17	19	20475	2	-10512	3prime_fragment	FALSE	canonical	1	74856	junction_4	174426.67133808022	NA	3	1	TRUE	NA	NA	NA	C	coding	338	1014	288	1301	65.0	1	True	NA	NA
PB.6514.6	chr2	+	3323	6	novel_not_in_catalog	ETAA1	novel	3418	6	NA	NA	5	-139	any annotated donor/acceptor	FALSE	canonical	1	1154	junction_3	56981.826469147156	NA	2	1	TRUE	NA	NA	NA	C	coding	944	2835	121	2955	25.0	-4	True	AATAAA	-20
PB.6514.5	chr2	+	4698	6	full-splice_match	ETAA1	ENST00000272342.5	3418	6	10	-1290	5	-254	multi-exon	FALSE	canonical	1	89741	junction_1	22533.260726313005	NA	3	NA	TRUE	NA	NA	NA	C	coding	926	2781	121	2901	25.0	-4	True	AATAAA	-20
PB.6514.4	chr2	+	3281	6	full-splice_match	ETAA1	ENST00000272342.5	3418	6	2	135	-1	-135	multi-exon	FALSE	canonical	1	89741	junction_1	22533.260726313005	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	129	2909	20.0	-12	True	AATAAA	-24
PB.2461.2	chr12	-	2388	1	novel_in_catalog	CLECL1	novel	557	3	NA	NA	23	-8214	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.6409.2	chr2	-	1980	8	full-splice_match	FEZ2	ENST00000405912.7	1931	8	-18	-31	6	0	multi-exon	FALSE	canonical	1	252469	junction_7	151197.44873765402	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	19	1080	45.0	-11	True	AATAAA	-14
PB.6409.3	chr2	-	1883	9	novel_not_in_catalog	FEZ2	novel	430	2	NA	NA	6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	214913.30765726793	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	225	983	45.0	-11	True	AATAAA	-14
PB.6409.4	chr2	-	1900	7	full-splice_match	FEZ2	ENST00000451623.5	1869	7	9	-40	9	-1	multi-exon	FALSE	canonical	1	41161	junction_2	231144.73777387958	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	16	933	45.0	-8	True	AATAAA	-13
PB.5750.5	chr19	-	3197	24	full-splice_match	MAN2B1	ENST00000456935.6	3184	24	-13	0	-13	0	multi-exon	FALSE	canonical	1	500649	junction_13	240037.2777291833	NA	12	NA	TRUE	NA	NA	NA	C	coding	1011	3036	55	3090	15.0	-14	True	ATTAAA	-19
PB.9898.1	chr6	-	1211	4	full-splice_match	GPSM3	ENST00000375040.7	1476	4	263	2	225	-1	multi-exon	FALSE	canonical	1	432742	junction_2	246267.8522517031	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	131	613	20.0	-4	True	AATAAA	-16
PB.5750.6	chr19	-	3241	24	novel_not_in_catalog	AC010422.3	novel	838	5	NA	NA	-18357	-2682	any annotated donor/acceptor	FALSE	canonical	1	2591	junction_11	295818.7891101214	NA	0	NA	TRUE	NA	NA	NA	B	coding	1026	3081	54	3134	15.0	-13	True	ATTAAA	-19
PB.11851.2	chr9	+	4587	18	full-splice_match	GPR107	ENST00000347136.10	7209	18	471	2151	-24	1890	multi-exon	FALSE	canonical	1	172831	junction_1	61384.345424410865	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	37	1695	30.0	-10	False	AATAAA	-22
PB.9017.1	chr4	+	3972	8	full-splice_match	EDNRA	ENST00000648866.1	4135	8	163	0	163	0	multi-exon	FALSE	canonical	1	39451	junction_1	22815.221744819974	NA	3	NA	TRUE	NA	NA	NA	C	coding	427	1284	353	1636	20.0	-2	True	AATAAA	-18
PB.10893.1	chr7	+	4006	11	full-splice_match	CASP2	ENST00000310447.9	4225	11	212	7	-24	-6	multi-exon	FALSE	canonical	1	169856	junction_1	55962.82473606921	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	30	1388	25.0	19	True	AATAAA	-13
PB.10893.3	chr7	+	4057	11	novel_in_catalog	CASP2	novel	4006	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	43210	junction_1	83434.50389856705	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	1294	2559	95.0	-25	True	NA	NA
PB.2461.1	chr12	-	4370	3	full-splice_match	CLECL1	ENST00000542530.5	557	3	-228	-3585	-48	2884	multi-exon	FALSE	canonical	1	18202	junction_1	99824.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	84	587	20.0	5813	False	NA	NA
PB.10893.5	chr7	+	3873	11	full-splice_match	CASP2	ENST00000310447.9	4225	11	220	132	-16	-131	multi-exon	FALSE	canonical	1	169856	junction_1	55962.82473606921	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	22	1380	15.0	27	True	NA	NA
PB.10893.4	chr7	+	3758	11	full-splice_match	CASP2	ENST00000310447.9	4225	11	170	297	-10	-296	multi-exon	FALSE	canonical	1	169856	junction_1	55962.82473606921	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	72	1430	10.0	-23	True	GATAAA	-37
PB.10893.6	chr7	+	2870	11	full-splice_match	CASP2	ENST00000310447.9	4225	11	228	1127	-8	0	multi-exon	FALSE	canonical	1	169856	junction_1	55962.82473606921	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	14	1372	95.0	35	True	NA	NA
PB.6238.6	chr19	+	3543	6	novel_not_in_catalog	ZNF543	novel	3659	4	NA	NA	-6	5537	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	27416.4746209282	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	352	2154	5.0	16	True	NA	NA
PB.6238.7	chr19	+	3136	4	full-splice_match	ZNF543	ENST00000321545.4	3659	4	2	521	2	-521	multi-exon	FALSE	canonical	1	37340	junction_1	15897.54071127565	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	344	2146	10.0	24	True	AATACA	-19
PB.6238.4	chr19	+	4095	5	novel_not_in_catalog	ZNF543	novel	3659	4	NA	NA	-29	1557	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	25657.700611853354	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	375	2177	20.0	-7	True	NA	NA
PB.6238.5	chr19	+	6388	5	novel_not_in_catalog	ZNF543	novel	3659	4	NA	NA	-24	4272	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	25657.700611853354	NA	9	1	TRUE	NA	NA	NA	C	coding	600	1803	370	2172	30.0	-2	True	NA	NA
PB.6238.2	chr19	+	3584	4	full-splice_match	ZNF543	ENST00000321545.4	3659	4	-49	124	-49	-124	multi-exon	FALSE	canonical	1	37340	junction_1	15897.54071127565	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	395	2197	20.0	-119	False	ATTAAA	-14
PB.6238.3	chr19	+	3983	5	novel_not_in_catalog	ZNF543	novel	3659	4	NA	NA	-31	1559	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	25657.700611853354	NA	4	1	TRUE	NA	NA	NA	C	coding	600	1803	377	2179	15.0	-9	True	NA	NA
PB.7009.1	chr2	+	3092	16	full-splice_match	PLCD4	ENST00000450993.6	3232	16	143	-3	-8	0	multi-exon	FALSE	non_canonical	0	0	junction_4	11262.792614030797	NA	0	NA	TRUE	NA	NA	NA	A	coding	762	2289	197	2485	20.0	-11	False	TATAAA	-25
PB.6238.1	chr19	+	3706	4	full-splice_match	ZNF543	ENST00000321545.4	3659	4	-49	2	-49	-2	multi-exon	FALSE	canonical	1	37340	junction_1	15897.54071127565	NA	4	NA	TRUE	NA	NA	NA	C	coding	600	1803	395	2197	25.0	-119	False	AGTAAA	-28
PB.1051.1	chr1	+	5862	18	full-splice_match	ZC3H11A	ENST00000367210.2	5877	18	18	-3	7	0	multi-exon	FALSE	canonical	1	19678	junction_5	192253.31443878662	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	1705	4137	25.0	55	False	AATAAA	-18
PB.172.23	chr1	-	2050	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	93663	junction_4	298631.9726538652	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	784	1287	80.0	-1	True	NA	NA
PB.7521.1	chr21	+	3683	10	full-splice_match	ETS2	ENST00000360938.7	3766	10	25	58	25	-58	multi-exon	FALSE	canonical	1	330020	junction_1	220963.51802794042	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	266	1675	35.0	-5839	False	AATAAA	-15
PB.3253.1	chr13	+	2255	6	full-splice_match	TNFSF13B	ENST00000375887.8	2582	6	320	7	142	-7	multi-exon	FALSE	canonical	1	112668	junction_3	30938.782720721254	NA	2	NA	TRUE	NA	NA	NA	A	coding	78	237	480	716	15.0	-19	True	AATAAA	-18
PB.7521.2	chr21	+	2209	10	full-splice_match	ETS2	ENST00000360938.7	3766	10	46	1511	46	-1511	multi-exon	FALSE	canonical	1	330020	junction_1	220963.51802794042	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	245	1654	50.0	-5818	False	TTTAAA	-22
PB.11736.11	chr9	+	2589	13	novel_in_catalog	PRPF4	novel	3212	14	NA	NA	31	-565	intron_retention	FALSE	canonical	1	77897	junction_1	106979.31975854025	NA	3	NA	TRUE	NA	NA	NA	C	coding	333	1002	1037	2038	70.0	15	True	NA	NA
PB.12138.1	chrX	-	882	7	full-splice_match	RPS4X	ENST00000316084.9	1526	7	82	562	30	109	multi-exon	FALSE	canonical	1	3914650	junction_6	2619545.5274068695	NA	0	NA	TRUE	NA	NA	NA	A	coding	263	792	24	815	5.0	-1	True	ATTAAA	-24
PB.7529.19	chr21	+	2647	16	novel_in_catalog	MX1	novel	762	5	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	26880	junction_13	340427.4709405743	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	363	2192	10.0	-2	True	AATAAA	-17
PB.5452.4	chr18	+	2406	21	novel_in_catalog	ELP2	novel	535	7	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	1	9358	junction_10	167653.36061716	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	42	2390	20.0	-10	True	AATAAA	-29
PB.9408.1	chr5	-	4537	7	novel_not_in_catalog	DTWD2	novel	4365	6	NA	NA	-12	1248	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	17537.216958989437	NA	7	1	TRUE	NA	NA	NA	C	coding	298	897	47	943	20.0	-24	True	ATTAAA	-25
PB.9408.2	chr5	-	2984	7	novel_not_in_catalog	DTWD2	novel	4365	6	NA	NA	-2	998	any annotated donor/acceptor	FALSE	canonical	1	48	junction_1	17520.914435801194	NA	3	NA	TRUE	NA	NA	NA	C	coding	298	897	37	933	40.0	-14	True	ATTAAA	-18
PB.9408.3	chr5	-	2296	6	full-splice_match	DTWD2	ENST00000510708.5	2307	6	11	0	5	0	multi-exon	FALSE	canonical	1	27478	junction_3	7904.694488719979	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	24	920	80.0	-1	True	NA	NA
PB.6242.1	chr19	+	2660	3	full-splice_match	ZNF17	ENST00000601808.1	2524	3	-18	-118	-2	-18	multi-exon	FALSE	canonical	1	7155	junction_1	22682.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	232	2220	20.0	0	True	NA	NA
PB.5452.7	chr18	+	2613	18	novel_not_in_catalog	ELP2	novel	535	7	NA	NA	-1	50	any annotated donor/acceptor	FALSE	canonical	1	3262	junction_9	145020.3680934934	NA	1	1	TRUE	NA	NA	NA	C	coding	350	1053	985	2037	75.0	-6	True	CATAAA	-3
PB.6242.3	chr19	+	2587	4	full-splice_match	ZNF17	ENST00000307658.11	2716	4	-1	130	0	2	multi-exon	FALSE	canonical	1	33257	junction_1	8459.695121903364	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	265	2259	5.0	2	True	NA	NA
PB.12239.21	chrX	-	1860	9	incomplete-splice_match	SEPT6	ENST00000343984.5	2693	10	174	11190	174	-13	3prime_fragment	FALSE	canonical	1	639407	junction_8	180102.7407897625	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	92	1375	95.0	-6	True	NA	NA
PB.807.19	chr1	-	2530	10	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28528	-44729	no_combination_of_known_junctions	FALSE	canonical	1	11591	junction_1	280606.92707512266	NA	0	NA	TRUE	NA	NA	NA	B	coding	730	2193	136	2328	15.0	0	True	NA	NA
PB.6822.8	chr2	+	2651	14	novel_in_catalog	PPIG	novel	6368	14	NA	NA	150	26	combination_of_known_junctions	FALSE	canonical	1	90749	junction_1	119906.44488302206	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	173	2437	40.0	-3	True	AATAAA	-12
PB.11702.8	chr9	+	6291	10	full-splice_match	FKTN	ENST00000223528.6	7364	10	2	1071	0	-269	multi-exon	FALSE	canonical	1	16618	junction_1	24403.338434841902	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	123	1508	35.0	0	True	AATAAA	-10
PB.5452.6	chr18	+	2483	22	full-splice_match	ELP2	ENST00000539560.5	2542	22	-7	66	0	2	multi-exon	FALSE	canonical	1	10929	junction_18	162969.0026556043	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	41	2158	20.0	-9	True	AATAAA	-27
PB.5452.1	chr18	+	2326	20	novel_in_catalog	ELP2	novel	535	7	NA	NA	-1	1	no_combination_of_known_junctions	FALSE	canonical	1	21819	junction_4	186664.96971758676	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	45	2105	20.0	-13	True	AATAAA	-26
PB.807.13	chr1	-	2564	10	full-splice_match	YY1AP1	ENST00000347088.9	2524	10	-48	8	2	-8	multi-exon	FALSE	canonical	1	11591	junction_1	279791.2399870771	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	109	2361	15.0	27	True	NA	NA
PB.807.15	chr1	-	2649	11	full-splice_match	YY1AP1	ENST00000295566.8	2626	11	-32	9	-32	-9	multi-exon	FALSE	canonical	1	7307	junction_10	270337.4844038651	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	57	2447	15.0	-37	False	NA	NA
PB.807.14	chr1	-	2711	12	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28497	-44729	no_combination_of_known_junctions	FALSE	canonical	1	5515	junction_9	277551.9757187028	NA	0	NA	TRUE	NA	NA	NA	B	coding	719	2160	350	2509	15.0	31	True	NA	NA
PB.807.17	chr1	-	2549	9	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28528	-44729	no_combination_of_known_junctions	FALSE	canonical	1	2177	junction_8	294976.16390542366	NA	1	NA	TRUE	NA	NA	NA	B	coding	739	2220	128	2347	15.0	0	True	NA	NA
PB.8238.5	chr3	-	2883	5	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18555	158451	any annotated donor/acceptor	FALSE	canonical	1	1225	junction_1	2005.2711163331505	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-33	False	AATAAA	-13
PB.5461.4	chr18	-	1991	15	full-splice_match	PSTPIP2	ENST00000409746.5	3000	15	-41	1050	-29	-353	multi-exon	FALSE	canonical	1	92329	junction_12	42859.3775198352	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	114	1118	40.0	9776	False	NA	NA
PB.5452.3	chr18	+	2519	21	full-splice_match	ELP2	ENST00000351393.10	2453	21	8	-74	0	1	multi-exon	FALSE	canonical	1	21819	junction_4	161935.83814983637	NA	2	2	TRUE	NA	NA	NA	C	coding	800	2403	36	2438	15.0	-4	True	NA	NA
PB.9866.4	chr6	-	1762	10	novel_not_in_catalog	HLA-B	novel	240	3	NA	NA	-1289	-2	intron_retention	FALSE	canonical	1	122	junction_9	9333882.737320596	NA	2	NA	TRUE	NA	NA	NA	B	coding	362	1089	247	1335	15.0	8558	False	AATAAA	-19
PB.5452.2	chr18	+	3942	23	full-splice_match	ELP2	ENST00000442325.6	2722	23	-6	-1214	1	833	multi-exon	FALSE	canonical	1	32560	junction_6	183451.25950363785	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	43	2718	25.0	-11	True	AATAAA	-13
PB.9866.2	chr6	-	2356	6	novel_in_catalog	HLA-B	novel	240	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	6916752	junction_5	6821192.330483127	NA	3	NA	TRUE	NA	NA	NA	B	coding	116	351	22	372	15.0	-1	True	AATAAA	-19
PB.9866.3	chr6	-	2111	7	novel_in_catalog	HLA-B	novel	240	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	6916752	junction_6	7497345.874696431	NA	2	NA	TRUE	NA	NA	NA	B	coding	236	711	22	732	15.0	-1	True	AATAAA	-19
PB.9124.11	chr5	-	3326	11	novel_not_in_catalog	LPCAT1	novel	5610	17	NA	NA	5294	0	any annotated donor/acceptor	TRUE	canonical	1	228	junction_10	214653.27099918603	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	109	1104	15.0	5754	False	AGTAAA	-21
PB.1815.1	chr11	+	1491	4	full-splice_match	ADM	ENST00000278175.9	1885	4	393	1	0	1	multi-exon	FALSE	canonical	1	712434	junction_1	38487.09758116637	NA	1	NA	TRUE	NA	NA	NA	A	coding	185	558	179	736	10.0	0	True	AATAAA	-15
PB.9124.17	chr5	-	4074	15	novel_in_catalog	LPCAT1	novel	5610	17	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	3798	junction_14	241354.81969689016	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	393	1853	15.0	0	True	AGTAAA	-20
PB.7529.16	chr21	+	2256	14	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-1	-2057	any annotated donor/acceptor	FALSE	canonical	1	40102	junction_13	344732.41819391237	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	369	1820	10.0	-8	True	NA	NA
PB.7529.17	chr21	+	3019	14	novel_not_in_catalog	MX1	novel	762	5	NA	NA	0	-1293	any annotated donor/acceptor	FALSE	canonical	1	40102	junction_13	344732.41819391237	NA	2	NA	TRUE	NA	NA	NA	C	coding	483	1452	368	1819	30.0	-7	True	ACTAAA	-20
PB.931.2	chr1	+	1936	12	incomplete-splice_match	PRRC2C	ENST00000367742.7	10366	34	-20	60749	-20	-13	3prime_fragment	FALSE	canonical	1	473026	junction_1	168130.64058848468	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1674	263	1936	75.0	-19	True	AAAACA	-14
PB.8228.1	chr3	-	3103	8	novel_not_in_catalog	LINC00877	novel	2506	7	NA	NA	7	25191	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7324.3406696369575	NA	0	NA	TRUE	NA	NA	NA	B	coding	108	327	1179	1505	30.0	-3	True	AATAAA	-19
PB.8454.1	chr3	+	2550	1	antisense	novelGene_PLSCR1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11193.1	chr8	+	3006	1	antisense	novelGene_CASC9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	338	1017	788	1804	70.0	NA	False	NA	NA
PB.11568.9	chr9	+	2530	3	full-splice_match	CR769775.1	ENST00000443347.5	931	3	-10	-1589	-10	1589	multi-exon	FALSE	canonical	0	0	junction_1	10.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.593.1	chr1	+	3739	6	full-splice_match	SYPL2	ENST00000369872.3	3624	6	-121	6	-121	-6	multi-exon	TRUE	canonical	1	23592	junction_1	9436.451833183912	NA	0	NA	TRUE	NA	NA	NA	A	coding	272	819	338	1156	30.0	-94	False	AATAAA	-23
PB.1051.5	chr1	+	3235	13	incomplete-splice_match	ZC3H11A	ENST00000367210.2	5877	18	20	6447	-6	-13	3prime_fragment	FALSE	canonical	1	19678	junction_5	80475.96622090039	NA	3	NA	TRUE	NA	NA	NA	C	coding	511	1533	1703	3235	60.0	57	False	NA	NA
PB.214.4	chr1	+	3540	9	full-splice_match	FAM76A	ENST00000373954.10	3567	9	19	8	2	-8	multi-exon	FALSE	canonical	1	10539	junction_1	37306.46230024197	NA	7	NA	TRUE	NA	NA	NA	C	coding	307	924	84	1007	25.0	14	True	AATAAA	-16
PB.7198.9	chr20	-	2189	14	novel_not_in_catalog	CRNKL1	novel	4370	15	NA	NA	7	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	100476.3865442726	NA	5	1	TRUE	NA	NA	NA	C	coding	673	2022	118	2139	20.0	6	True	TATAAA	-12
PB.1043.5	chr1	-	2039	8	full-splice_match	ADIPOR1	ENST00000340990.9	2177	8	93	45	-11	-42	multi-exon	FALSE	canonical	1	461540	junction_7	357448.2908876328	NA	3	NA	TRUE	NA	NA	NA	C	coding	375	1128	207	1334	65.0	-17	True	AAGAAA	-45
PB.9008.16	chr4	+	3817	17	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	0	335	no_combination_of_known_junctions	FALSE	canonical	1	4306	junction_11	186327.31006513612	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	137	1876	40.0	-3	True	AATAAA	-10
PB.9520.2	chr5	+	3960	1	full-splice_match	PCDHB15	ENST00000231173.5	4017	1	57	0	11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	787	2364	174	2537	0.0	11	True	NA	NA
PB.9520.1	chr5	+	2784	1	full-splice_match	PCDHB15	ENST00000231173.5	4017	1	48	1185	2	-1185	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	787	2364	183	2546	40.0	2	True	AATAAA	-19
PB.1211.12	chr1	-	2154	3	novel_not_in_catalog	IRF2BP2	novel	4615	2	NA	NA	-633	443	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	397275.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	111	1805	80.0	-12	True	NA	NA
PB.916.1	chr1	+	3968	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	-4	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	147	629	25.0	-9166	False	AATAAA	-21
PB.7118.8	chr2	+	3629	11	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	28048	junction_7	80273.84117606432	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	2058	2789	10.0	0	True	AGTAAA	-17
PB.5977.6	chr19	+	2757	14	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	-1	-54	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	890169.6208490782	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	99	2099	90.0	-1	True	NA	NA
PB.9728.1	chr6	-	3140	7	full-splice_match	TFAP2A	ENST00000379613.8	3331	7	190	1	-72	-1	multi-exon	FALSE	canonical	1	96577	junction_6	54776.53779498623	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	82	1401	15.0	-2	True	AATAAA	-21
PB.9728.3	chr6	-	2797	7	full-splice_match	TFAP2A	ENST00000379613.8	3331	7	165	369	-97	364	multi-exon	FALSE	canonical	1	96577	junction_6	54776.53779498623	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	113	1426	15.0	-27	True	AATAAA	-16
PB.9728.2	chr6	-	3460	7	full-splice_match	TFAP2A	ENST00000379608.8	3829	7	0	369	0	364	multi-exon	FALSE	canonical	1	54898	junction_6	68916.83020536823	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	818	2089	15.0	-1	True	AATAAA	-16
PB.9728.5	chr6	-	2121	7	full-splice_match	TFAP2A	ENST00000379608.8	3829	7	357	1351	14	-15	multi-exon	FALSE	canonical	1	54898	junction_6	68916.83020536823	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	461	1732	65.0	1	True	NA	NA
PB.9728.7	chr6	-	3192	7	novel_in_catalog	TFAP2A	novel	582	3	NA	NA	-2	-13	intron_retention	FALSE	canonical	1	7423	junction_6	85613.54079119468	NA	2	NA	TRUE	NA	NA	NA	C	coding	101	306	2496	2801	75.0	-3	True	NA	NA
PB.9728.6	chr6	-	1818	7	full-splice_match	TFAP2A	ENST00000379613.8	3331	7	165	1348	-97	-12	multi-exon	FALSE	canonical	1	96577	junction_6	54776.53779498623	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	113	1426	80.0	-27	True	NA	NA
PB.9728.9	chr6	-	4355	6	novel_in_catalog	TFAP2A	novel	582	3	NA	NA	-5	-45	intron_retention	FALSE	canonical	1	54898	junction_5	70913.24623622868	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	3691	3996	70.0	-6	True	NA	NA
PB.9728.8	chr6	-	2092	7	full-splice_match	TFAP2A	ENST00000379608.8	3829	7	356	1381	13	-45	multi-exon	FALSE	canonical	1	54898	junction_6	68916.83020536823	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	462	1733	70.0	0	True	NA	NA
PB.3979.4	chr15	+	2014	13	full-splice_match	CSK	ENST00000220003.13	2767	13	452	301	5	15	multi-exon	FALSE	canonical	1	492215	junction_1	359617.1105179863	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	278	1630	40.0	0	True	AAGAAA	-25
PB.3979.3	chr15	+	2309	13	full-splice_match	CSK	ENST00000220003.13	2767	13	457	1	10	-1	multi-exon	FALSE	canonical	1	492215	junction_1	359617.1105179863	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	273	1625	0.0	5	True	NA	NA
PB.3979.2	chr15	+	2227	14	full-splice_match	CSK	ENST00000439220.6	1900	14	-11	-316	-11	0	multi-exon	FALSE	canonical	1	14001	junction_1	479620.12389108713	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	190	1542	0.0	-10	True	NA	NA
PB.3979.1	chr15	+	1945	14	full-splice_match	CSK	ENST00000439220.6	1900	14	-30	-15	2	15	multi-exon	FALSE	canonical	1	14001	junction_1	479620.12389108713	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	209	1561	40.0	0	True	AAGAAA	-25
PB.5921.4	chr19	+	2186	6	novel_not_in_catalog	GRAMD1A	novel	2825	20	NA	NA	-8	-609	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	327848.30179178907	NA	5	1	TRUE	NA	NA	NA	C	coding	190	573	400	972	85.0	-8	True	NA	NA
PB.5921.5	chr19	+	3839	17	novel_not_in_catalog	GRAMD1A	novel	2825	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	222564.91872653697	NA	6	1	TRUE	NA	NA	NA	C	coding	534	1605	392	1996	0.0	0	True	AATAAA	-13
PB.5921.2	chr19	+	2635	18	full-splice_match	GRAMD1A	ENST00000411896.6	2523	18	-112	0	-9	0	multi-exon	FALSE	canonical	1	8619	junction_2	218449.3333073894	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	166	2307	0.0	-9	True	AATAAA	-13
PB.5921.3	chr19	+	2571	18	novel_not_in_catalog	GRAMD1A	novel	2825	20	NA	NA	22	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	219831.62203076744	NA	5	1	TRUE	NA	NA	NA	C	coding	640	1923	321	2243	0.0	-8760	False	AATAAA	-13
PB.5921.1	chr19	+	2749	19	novel_not_in_catalog	GRAMD1A	novel	2825	20	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	271033.07569600735	NA	4	1	TRUE	NA	NA	NA	C	coding	640	1923	497	2419	0.0	0	True	AATAAA	-15
PB.8255.18	chr3	-	1827	6	novel_in_catalog	CLDND1	novel	560	4	NA	NA	-1	-24	intron_retention	FALSE	canonical	1	9087	junction_3	539397.480871611	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	263	679	75.0	1	True	NA	NA
PB.6050.4	chr19	+	1824	5	full-splice_match	ZNF230	ENST00000429154.6	4115	5	9	2282	-2	-2205	multi-exon	FALSE	canonical	1	22571	junction_2	16052.428056216293	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	220	1644	25.0	-8	True	NA	NA
PB.1051.8	chr1	+	5041	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-31	2	any annotated donor/acceptor	FALSE	canonical	1	2294	junction_2	194703.65015105403	NA	2	1	TRUE	NA	NA	NA	C	coding	810	2433	882	3314	30.0	0	True	AATAAA	-20
PB.6050.2	chr19	+	4051	5	full-splice_match	ZNF230	ENST00000429154.6	4115	5	7	57	-4	20	multi-exon	FALSE	canonical	1	22571	junction_2	16052.428056216293	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	222	1646	35.0	-10	True	AATAAA	-21
PB.6050.3	chr19	+	3806	5	full-splice_match	ZNF230	ENST00000429154.6	4115	5	8	301	-3	-224	multi-exon	FALSE	canonical	1	22571	junction_2	16052.428056216293	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	221	1645	45.0	-9	True	AATAAA	-31
PB.6050.1	chr19	+	1800	1	full-splice_match	ZNF230	ENST00000589275.1	1794	1	-32	26	-21	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-38	False	NA	NA
PB.8364.10	chr3	-	2710	2	novel_not_in_catalog	OSBPL11	novel	4191	13	NA	NA	-514	-63851	any annotated donor/acceptor	FALSE	canonical	1	4884	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-108	False	ATTAAA	-30
PB.8248.4	chr3	+	1459	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	73	1757	-1	-1757	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	139	1161	20.0	-72	True	NA	NA
PB.11290.12	chr8	-	2245	8	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	-31	637	any annotated donor/acceptor	FALSE	canonical	1	18406	junction_7	149420.4973515197	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	704	1255	15.0	-29	True	AATAAA	-12
PB.11290.11	chr8	-	2188	7	full-splice_match	SLC25A32	ENST00000297578.8	2891	7	-79	782	6	641	multi-exon	FALSE	canonical	1	266335	junction_5	58812.23729708715	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	247	1194	25.0	58	False	AATAAA	-16
PB.11776.1	chr9	+	4214	2	novel_not_in_catalog	AC007066.2	novel	1993	2	NA	NA	-5975	1	intron_retention	FALSE	canonical	1	17834	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	117	354	1550	1903	25.0	-23	True	AATAAA	-21
PB.6795.6	chr2	+	2552	4	novel_not_in_catalog	TANC1	novel	7470	27	NA	NA	-32	-58972	any annotated donor/acceptor	FALSE	canonical	1	9786	junction_3	40054.69976863584	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-17
PB.12063.8	chrX	+	2237	5	novel_in_catalog	RBM3	novel	501	5	NA	NA	-44	-6	intron_retention	FALSE	canonical	1	2807765	junction_2	842096.1552879517	NA	3	NA	TRUE	NA	NA	NA	C	coding	118	357	274	630	35.0	-2129	False	ATTAAA	-16
PB.12063.6	chrX	+	1396	7	full-splice_match	RBM3	ENST00000376759.7	2162	7	-15	781	-2	-6	multi-exon	FALSE	canonical	1	2807765	junction_4	697305.3667716574	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	79	552	35.0	-2	True	ATTAAA	-16
PB.12063.7	chrX	+	2042	6	novel_in_catalog	RBM3	novel	501	5	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	2807765	junction_3	760404.4566160827	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	79	435	35.0	-2	True	ATTAAA	-16
PB.12063.4	chrX	+	2207	5	novel_in_catalog	RBM3	novel	501	5	NA	NA	1	101	intron_retention	FALSE	canonical	1	2807765	junction_3	846262.6746978078	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	96	452	65.0	8	True	NA	NA
PB.12063.5	chrX	+	1671	8	full-splice_match	RBM3	ENST00000466764.5	1375	8	10	-306	-10	-8	multi-exon	FALSE	canonical	1	53401	junction_3	1905366.829735451	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	597	947	35.0	-2536	False	ATTAAA	-14
PB.12063.2	chrX	+	2008	8	novel_not_in_catalog	RBM3	novel	501	5	NA	NA	0	2094	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1565182.0448719016	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	104	577	25.0	0	True	AATAAA	-20
PB.12063.3	chrX	+	2415	5	novel_in_catalog	RBM3	novel	501	5	NA	NA	0	-6	intron_retention	FALSE	canonical	1	2807765	junction_3	846262.6746978078	NA	2	NA	TRUE	NA	NA	NA	C	coding	118	357	97	453	35.0	7	True	ATTAAA	-16
PB.12063.1	chrX	+	1951	7	novel_in_catalog	RBM3	novel	501	5	NA	NA	1	-9	intron_retention	TRUE	canonical	1	53401	junction_3	1641584.9104706114	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	719	1228	35.0	-2587	False	ATTAAA	-13
PB.4278.8	chr16	-	4016	31	full-splice_match	NOMO2	ENST00000622306.4	4252	31	-49	285	15	-274	multi-exon	FALSE	canonical	0	0	junction_1	173959.0004908436	NA	4	NA	TRUE	NA	NA	NA	C	coding	1222	3669	122	3790	35.0	NA	False	AATGAA	-24
PB.6795.8	chr2	+	7668	28	novel_not_in_catalog	TANC1	novel	7470	27	NA	NA	-31	-2	any annotated donor/acceptor	FALSE	canonical	1	2355	junction_2	42627.61055272559	NA	1	NA	TRUE	NA	NA	NA	C	coding	1861	5586	438	6023	30.0	-1	True	AATAAA	-13
PB.4325.1	chr16	-	1040	8	full-splice_match	NSMCE1	ENST00000361439.8	1067	8	22	5	-8	-1	multi-exon	FALSE	canonical	1	567703	junction_7	199623.8035759324	NA	0	NA	TRUE	NA	NA	NA	A	coding	256	771	109	879	10.0	-17	True	AATAAA	-20
PB.8760.5	chr4	-	8282	37	novel_in_catalog	ATP8A1	novel	5918	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	19480	junction_22	58734.71089307985	NA	3	NA	TRUE	NA	NA	NA	C	coding	1164	3495	249	3743	35.0	-29	True	AATAAA	-15
PB.8760.2	chr4	-	8082	36	novel_not_in_catalog	ATP8A1	novel	5918	14	NA	NA	-12077	1	any annotated donor/acceptor	FALSE	canonical	1	3321	junction_35	54054.973847046655	NA	0	NA	TRUE	NA	NA	NA	C	coding	1178	3537	6	3542	30.0	267	False	AATAAA	-16
PB.8760.1	chr4	-	8225	36	full-splice_match	ATP8A1	ENST00000264449.14	8209	36	-15	-1	-3	1	multi-exon	FALSE	canonical	1	76866	junction_29	47825.682042387976	NA	2	NA	TRUE	NA	NA	NA	C	coding	1149	3450	236	3685	30.0	-16	True	AATAAA	-16
PB.9712.2	chr6	+	1683	7	full-splice_match	FARS2	ENST00000274680.8	1663	7	-9	-11	-9	11	multi-exon	FALSE	canonical	1	86409	junction_1	44054.48721911185	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	166	1521	15.0	-9	True	AATAAA	-28
PB.4278.1	chr16	-	4859	33	novel_not_in_catalog	NOMO2	novel	4352	31	NA	NA	-29	6015	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	169496.62680713175	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	102	3905	25.0	NA	False	NA	NA
PB.9712.1	chr6	+	1839	7	full-splice_match	FARS2	ENST00000324331.10	1692	7	8	-155	8	4	multi-exon	TRUE	canonical	1	5013	junction_1	72264.17003009783	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	329	1684	20.0	-474	False	AATAAA	-21
PB.11627.9	chr9	-	3933	26	full-splice_match	AGTPBP1	ENST00000376083.7	4208	26	-129	404	-59	-272	multi-exon	FALSE	canonical	1	50446	junction_16	69536.90892123405	NA	0	NA	TRUE	NA	NA	NA	C	coding	1186	3561	207	3767	25.0	-22	True	AATAAA	-20
PB.11627.8	chr9	-	4058	26	full-splice_match	AGTPBP1	ENST00000357081.7	4393	26	-66	401	-64	-272	multi-exon	FALSE	canonical	1	93391	junction_25	64220.69982220998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1226	3681	212	3892	25.0	-27	True	AATAAA	-20
PB.9378.1	chr5	-	1828	1	antisense	novelGene_FER_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	89	270	233	502	25.0	-9	False	NA	NA
PB.4278.7	chr16	-	4492	32	novel_not_in_catalog	NOMO2	novel	4352	31	NA	NA	-10	5	intron_retention	FALSE	canonical	0	0	junction_1	171788.85350878458	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	1996	3987	30.0	NA	False	AATAAA	-22
PB.6910.39	chr2	-	4121	26	novel_not_in_catalog	STAT1	novel	663	3	NA	NA	-2	-232	any annotated donor/acceptor	FALSE	canonical	1	7905	junction_3	468990.32219127764	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	309	2447	15.0	-11	True	ATTAAA	-39
PB.1982.2	chr11	-	2195	11	novel_in_catalog	FADS3	novel	1640	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	414995	junction_10	151020.7259140281	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	162	1319	20.0	2	True	NA	NA
PB.8760.20	chr4	-	2543	6	incomplete-splice_match	ATP8A1	ENST00000381668.9	8270	37	-4	190248	-4	-16929	3prime_fragment	FALSE	canonical	1	87975	junction_5	28251.47553243901	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	237	743	65.0	-17	True	NA	NA
PB.1043.4	chr1	-	2441	7	novel_in_catalog	ADIPOR1	novel	2177	8	NA	NA	47	-9	intron_retention	FALSE	canonical	1	461540	junction_6	385084.2663843923	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	253	1293	35.0	-6	True	AATAAA	-28
PB.8025.11	chr3	+	3397	17	novel_not_in_catalog	WDR48	novel	3707	19	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	85394.6221564003	NA	2	NA	TRUE	NA	NA	NA	C	coding	582	1749	4	1752	70.0	0	True	NA	NA
PB.302.6	chr1	-	3063	19	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	56147.647858372286	NA	2	1	TRUE	NA	NA	NA	C	coding	749	2250	28	2277	10.0	-1	True	GATAAA	-17
PB.11741.1	chr9	+	3092	7	novel_not_in_catalog	RGS3	novel	4591	26	NA	NA	31	0	intron_retention	FALSE	canonical	1	3193	junction_1	49181.724998271005	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	444	1556	40.0	-3265	False	NA	NA
PB.429.1	chr1	+	1953	9	novel_in_catalog	MROH7-TTC4	novel	5162	33	NA	NA	16535	-2	intron_retention	FALSE	canonical	1	14856	junction_7	69270.28034163984	NA	8	NA	TRUE	NA	NA	NA	A	coding	329	990	79	1068	15.0	-2	True	NA	NA
PB.11872.1	chr9	+	2228	4	full-splice_match	SPACA9	ENST00000372136.7	2536	4	307	1	307	-1	multi-exon	FALSE	canonical	1	63304	junction_1	24332.48405367241	NA	0	NA	TRUE	NA	NA	NA	A	coding	222	669	141	809	5.0	-14	True	AATAAA	-16
PB.9266.1	chr5	+	2467	1	novel_in_catalog	MRPS36	novel	1286	4	NA	NA	0	-7976	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.2717.24	chr12	+	3609	21	novel_in_catalog	USP15	novel	14950	21	NA	NA	-1	0	intron_retention	FALSE	canonical	1	199851	junction_6	125223.02800000485	NA	2	1	TRUE	NA	NA	NA	C	coding	748	2247	10	2256	20.0	2	True	AATAAA	-16
PB.8893.4	chr4	+	2660	9	full-splice_match	DAPP1	ENST00000512369.1	1440	9	-5	-1215	-5	-225	multi-exon	FALSE	canonical	1	141384	junction_1	21456.081036328604	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	74	916	85.0	-9	True	NA	NA
PB.2717.21	chr12	+	3075	20	novel_in_catalog	USP15	novel	14950	21	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	1719	junction_5	145669.76380063937	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	760	2808	20.0	0	True	AATAAA	-15
PB.2717.20	chr12	+	3162	21	novel_in_catalog	USP15	novel	14950	21	NA	NA	-3	-1	no_combination_of_known_junctions	FALSE	canonical	1	2566	junction_5	150092.88783946427	NA	13	3	TRUE	NA	NA	NA	C	coding	729	2190	706	2895	20.0	0	True	AATAAA	-15
PB.2717.23	chr12	+	4521	22	novel_in_catalog	USP15	novel	14950	21	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	56855	junction_3	162185.67563061675	NA	3	1	TRUE	NA	NA	NA	C	coding	831	2496	1759	4254	20.0	2	True	AATAAA	-15
PB.2717.22	chr12	+	2574	9	novel_not_in_catalog	USP15	novel	14950	21	NA	NA	-3	-9092	any annotated donor/acceptor	FALSE	canonical	1	5584	junction_8	210631.1571868212	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	12	1121	45.0	0	True	AATAAA	-5
PB.10142.6	chr6	-	3321	20	novel_in_catalog	SEC63	novel	6411	21	NA	NA	-18	1	no_combination_of_known_junctions	FALSE	canonical	1	6637	junction_19	225205.74340234234	NA	4	NA	TRUE	NA	NA	NA	C	coding	620	1863	519	2381	15.0	0	True	AATAAA	-24
PB.10142.7	chr6	-	3402	21	full-splice_match	SEC63	ENST00000369002.8	6411	21	-2	3011	-2	-2	multi-exon	FALSE	canonical	1	53587	junction_1	210502.28907472716	NA	150	9	TRUE	NA	NA	NA	C	coding	760	2283	183	2465	15.0	16	True	AATAAA	-21
PB.10142.4	chr6	-	3862	21	full-splice_match	SEC63	ENST00000369002.8	6411	21	-11	2560	-11	449	multi-exon	FALSE	canonical	1	53587	junction_1	210502.28907472716	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	192	2474	35.0	7	True	AATAAA	-15
PB.10142.5	chr6	-	3272	20	novel_in_catalog	SEC63	novel	6411	21	NA	NA	-38	9	no_combination_of_known_junctions	FALSE	canonical	1	12967	junction_2	222482.17886688662	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	141	2324	15.0	-36	True	AATAAA	-32
PB.11295.6	chr8	+	4354	15	novel_in_catalog	OXR1	novel	3599	15	NA	NA	0	-118	combination_of_known_junctions	FALSE	canonical	1	63576	junction_14	86719.19224115953	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	134	2734	15.0	-2	True	AATAAA	-19
PB.10142.3	chr6	-	4383	21	full-splice_match	SEC63	ENST00000369002.8	6411	21	-11	2039	-11	970	multi-exon	FALSE	canonical	1	53587	junction_1	210502.28907472716	NA	1	NA	TRUE	NA	NA	NA	C	coding	760	2283	192	2474	100.0	7	True	NA	NA
PB.11295.4	chr8	+	3776	16	novel_not_in_catalog	AC027031.2	novel	1318	2	NA	NA	-45	478962	any annotated donor/acceptor	FALSE	canonical	1	16876	junction_1	102749.76319445002	NA	3	NA	TRUE	NA	NA	NA	B	coding	846	2541	316	2856	70.0	-54	True	AATATA	-15
PB.10142.1	chr6	-	6429	21	full-splice_match	SEC63	ENST00000369002.8	6411	21	-20	2	-20	-2	multi-exon	TRUE	canonical	1	53587	junction_1	210502.28907472716	NA	5	NA	TRUE	NA	NA	NA	C	coding	760	2283	201	2483	15.0	-2	True	NA	NA
PB.11704.1	chr9	+	3560	11	incomplete-splice_match	ZNF462	ENST00000277225.9	10414	13	65229	2152	948	0	5prime_fragment	FALSE	canonical	1	83638	junction_6	17453.489804620738	NA	0	NA	TRUE	NA	NA	NA	A	coding	1011	3036	73	3108	90.0	-4315	False	NA	NA
PB.11295.8	chr8	+	3804	15	novel_in_catalog	OXR1	novel	3599	15	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	63576	junction_14	86719.19224115953	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	134	2734	80.0	-2	True	NA	NA
PB.11801.4	chr9	+	2933	27	novel_not_in_catalog	LRSAM1	novel	3146	26	NA	NA	22	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	45746.00840615664	NA	2	1	TRUE	NA	NA	NA	C	coding	723	2172	304	2475	15.0	-2	True	AATAAA	-16
PB.10142.8	chr6	-	3064	18	novel_in_catalog	SEC63	novel	6411	21	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	2620	junction_17	230982.3644282803	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	563	2125	15.0	28	True	AATAAA	-23
PB.10142.9	chr6	-	3542	22	novel_in_catalog	SEC63	novel	6411	21	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	6163	junction_20	228145.4223296863	NA	2	NA	TRUE	NA	NA	NA	C	coding	704	2115	490	2604	15.0	19	True	AATAAA	-22
PB.8788.12	chr4	+	3568	12	incomplete-splice_match	CEP135	ENST00000506202.1	5129	19	26813	9	26813	-9	5prime_fragment	FALSE	canonical	1	62047	junction_7	22790.65648045087	NA	3	NA	TRUE	NA	NA	NA	C	coding	507	1524	298	1821	70.0	NA	False	AATAAA	-8
PB.7279.18	chr20	+	2182	17	novel_not_in_catalog	RPN2	novel	791	6	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	4402	junction_8	916765.1920922295	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	27	1880	40.0	1	True	AATAAA	-16
PB.7279.19	chr20	+	1976	10	novel_not_in_catalog	RPN2	novel	791	6	NA	NA	1	9722	any annotated donor/acceptor	FALSE	canonical	1	1248	junction_9	992465.0593523602	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	27	1130	30.0	1	True	NA	NA
PB.5952.1	chr19	+	2878	5	novel_in_catalog	ZNF382	novel	2657	4	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	1	10584	junction_1	14687.083736654462	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	511	2160	25.0	-30	False	NA	NA
PB.7279.12	chr20	+	2548	18	novel_not_in_catalog	RPN2	novel	791	6	NA	NA	-39	-1	any annotated donor/acceptor	FALSE	canonical	1	1246	junction_17	1095257.4669648642	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	236	2170	35.0	1	True	AATAAA	-17
PB.7279.13	chr20	+	2224	17	full-splice_match	RPN2	ENST00000237530.10	2515	17	286	5	2	-1	multi-exon	FALSE	canonical	1	1567056	junction_1	530338.7358612035	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	26	1921	35.0	2	True	AATAAA	-17
PB.7279.10	chr20	+	2312	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	-48	-2	combination_of_known_junctions	FALSE	canonical	1	5048	junction_15	945653.2198219716	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	245	2113	40.0	-8	True	AATAAA	-16
PB.7279.11	chr20	+	2227	17	novel_not_in_catalog	RPN2	novel	791	6	NA	NA	-44	-30	any annotated donor/acceptor	FALSE	canonical	1	3135	junction_12	915676.0928325016	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	241	1758	80.0	-4	True	AAGAAA	-29
PB.7279.16	chr20	+	3049	15	novel_in_catalog	RPN2	novel	791	6	NA	NA	-2	-30	intron_retention	FALSE	canonical	1	8649	junction_3	977538.2578735077	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	508	1359	80.0	-2	True	AAGAAA	-29
PB.4331.1	chr16	+	2501	9	antisense	novelGene_XPO6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	31.455325463266153	NA	2	2	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7279.14	chr20	+	2132	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	1	4556	junction_2	945210.2518680076	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	40	1839	50.0	-12	True	AATAAA	-7
PB.7279.15	chr20	+	2133	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	92529	junction_13	892003.3590290914	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	32	1831	40.0	-4	True	AATAAA	-16
PB.2498.3	chr12	-	3625	15	novel_in_catalog	RECQL	novel	3702	15	NA	NA	1	97	combination_of_known_junctions	FALSE	canonical	1	18880	junction_14	143943.06165024036	NA	7	1	TRUE	NA	NA	NA	C	coding	649	1950	296	2245	10.0	-68	False	AATACA	-17
PB.2498.1	chr12	-	5111	15	novel_in_catalog	RECQL	novel	3702	15	NA	NA	9	1649	intron_retention	TRUE	canonical	1	13259	junction_14	145066.85957736094	NA	3	NA	TRUE	NA	NA	NA	C	coding	649	1950	230	2179	25.0	-52	False	ATTAAA	-15
PB.8779.49	chr4	+	3685	11	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	6	-10579	any annotated donor/acceptor	FALSE	canonical	1	1146	junction_10	188925.18972026996	NA	2	NA	TRUE	NA	NA	NA	C	coding	307	924	189	1112	100.0	8	True	NA	NA
PB.8779.48	chr4	+	3392	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	5	183	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	226310.96955574694	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	190	1797	85.0	7	True	NA	NA
PB.2498.5	chr12	-	3469	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	1	34343	junction_15	141407.75922410417	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	235	2184	25.0	-11	True	AATAAA	-24
PB.4292.4	chr16	+	1540	9	full-splice_match	ACSM3	ENST00000440284.6	1517	9	-19	-4	-19	2	multi-exon	FALSE	canonical	1	105781	junction_1	43305.87563195091	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	181	1473	15.0	7	True	TATAAA	-25
PB.8779.44	chr4	+	5286	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	0	1964	intron_retention	FALSE	canonical	1	161024	junction_1	212525.69536755985	NA	4	NA	TRUE	NA	NA	NA	C	coding	571	1716	195	1910	35.0	2	True	ATTAAA	-12
PB.2498.8	chr12	-	3597	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	14	-63	combination_of_known_junctions	FALSE	canonical	1	32243	junction_15	141781.72780527428	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	428	2377	20.0	-47	True	AATAAA	-20
PB.2498.9	chr12	-	3470	16	full-splice_match	RECQL	ENST00000421138.6	2572	16	-70	-828	-26	-63	multi-exon	FALSE	canonical	1	85686	junction_15	132580.6780516008	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	301	2250	20.0	-27	True	AATAAA	-20
PB.8779.41	chr4	+	1815	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	1	-49	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	212525.69536755985	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1620	196	1815	70.0	1	True	NA	NA
PB.4292.1	chr16	+	2531	14	full-splice_match	ACSM3	ENST00000289416.9	2845	14	308	6	-30	-6	multi-exon	FALSE	canonical	1	105781	junction_1	38592.100813600446	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	192	1928	35.0	-4	True	AATAAA	-11
PB.4292.2	chr16	+	2111	14	full-splice_match	ACSM3	ENST00000289416.9	2845	14	309	425	-29	0	multi-exon	FALSE	canonical	1	105781	junction_1	38592.100813600446	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	191	1927	25.0	-3	True	AATAAA	-20
PB.4292.3	chr16	+	1881	14	full-splice_match	ACSM3	ENST00000289416.9	2845	14	312	652	-26	0	multi-exon	FALSE	canonical	1	105781	junction_1	38592.100813600446	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1692	188	1879	60.0	0	True	NA	NA
PB.10436.2	chr7	-	4154	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	92	4	-15	-4	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	37	2	TRUE	NA	NA	NA	C	coding	579	1740	266	2005	15.0	31	True	AATAAA	-18
PB.10436.3	chr7	-	4222	14	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-22	-1	no_combination_of_known_junctions	FALSE	canonical	1	3933	junction_12	42721.99152508954	NA	9	1	TRUE	NA	NA	NA	C	coding	422	1269	802	2070	15.0	1	True	AATAAA	-21
PB.2360.14	chr11	-	5849	2	full-splice_match	SRPRA	ENST00000531104.1	542	2	-3231	-2076	32	-26	multi-exon	FALSE	canonical	1	1038547	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	168	507	3523	4029	35.0	6	True	NA	NA
PB.2360.15	chr11	-	2785	15	novel_not_in_catalog	SRPRA	novel	3069	14	NA	NA	47	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	387394.68800879107	NA	11	NA	TRUE	NA	NA	NA	C	coding	638	1917	70	1986	35.0	21	True	NA	NA
PB.2360.12	chr11	-	5103	6	novel_in_catalog	SRPRA	novel	3069	14	NA	NA	51	-16	intron_retention	FALSE	canonical	1	1038547	junction_1	195957.20196349	NA	5	NA	TRUE	NA	NA	NA	C	coding	396	1191	2083	3273	10.0	25	True	NA	NA
PB.2360.13	chr11	-	3475	12	novel_in_catalog	SRPRA	novel	3069	14	NA	NA	2	-18	intron_retention	FALSE	canonical	1	894536	junction_11	202529.37966985072	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	1252	2496	10.0	0	True	NA	NA
PB.2360.10	chr11	-	3202	13	novel_in_catalog	SRPRA	novel	3069	14	NA	NA	26	-15	intron_retention	FALSE	canonical	1	894536	junction_12	194017.7430304736	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	709	2220	10.0	0	True	NA	NA
PB.2360.11	chr11	-	2848	13	novel_in_catalog	SRPRA	novel	3069	14	NA	NA	2	-16	no_combination_of_known_junctions	FALSE	canonical	1	9902	junction_2	414798.3556103562	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	115	1665	10.0	0	True	NA	NA
PB.11185.10	chr8	-	5971	12	full-splice_match	STAU2	ENST00000355780.9	4061	12	-26	-1884	13	1884	multi-exon	FALSE	canonical	1	57923	junction_1	80314.49220192389	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	246	1685	30.0	0	True	AATAAA	-20
PB.11185.11	chr8	-	4840	12	full-splice_match	STAU2	ENST00000355780.9	4061	12	-26	-753	13	753	multi-exon	FALSE	canonical	1	57923	junction_1	80314.49220192389	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	246	1685	25.0	0	True	ATTAAA	-34
PB.10436.8	chr7	-	3319	10	novel_not_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-1753	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	42795.178462699754	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	217	1167	15.0	-1767	False	AATAAA	-21
PB.9107.1	chr4	+	2365	1	intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-9074	False	NA	NA
PB.9993.1	chr6	-	1653	1	antisense	novelGene_BICRAL_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	102	309	772	1080	100.0	-2706	False	AATAAA	-14
PB.11185.15	chr8	-	4215	13	incomplete-splice_match	STAU2	ENST00000524300.5	3065	15	69	129238	11	-5	3prime_fragment	FALSE	canonical	1	14708	junction_10	95368.46945615581	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	283	1818	45.0	-2	True	AGTAAA	-18
PB.2360.18	chr11	-	2647	14	full-splice_match	SRPRA	ENST00000332118.10	3069	14	67	355	28	200	multi-exon	FALSE	canonical	1	894536	junction_13	202715.2176408362	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	89	2005	5.0	2	True	AATAAA	-17
PB.11185.17	chr8	-	3902	10	full-splice_match	STAU2	ENST00000517542.5	1695	10	14	-2221	14	-5	multi-exon	FALSE	canonical	1	15533	junction_9	96563.81688120383	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	84	1505	45.0	1	True	AGTAAA	-18
PB.8827.18	chr4	-	4107	10	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	1	1766	junction_9	476479.30668450147	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	396	1463	20.0	-5	True	AATAAA	-19
PB.10567.1	chr7	+	2722	1	intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	82	249	74	322	90.0	NA	False	NA	NA
PB.6028.1	chr19	-	1938	5	full-splice_match	DEDD2	ENST00000596251.5	1183	5	5	-760	1	-1	multi-exon	FALSE	canonical	1	122092	junction_3	47467.36035161425	NA	0	NA	TRUE	NA	NA	NA	A	coding	326	981	119	1099	15.0	-36	True	ATTAAA	-27
PB.329.1	chr1	-	7258	8	full-splice_match	RIMS3	ENST00000372684.7	7235	8	-23	0	-23	0	multi-exon	FALSE	canonical	1	27862	junction_7	30201.63219335765	NA	1	NA	TRUE	NA	NA	NA	A	coding	308	927	494	1420	10.0	-4	True	ATTAAA	-18
PB.7641.19	chr22	+	3203	4	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5066	-709	intron_retention	FALSE	canonical	1	186217	junction_3	184071.58663290637	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	2	True	AGTAAA	-15
PB.7641.18	chr22	+	1604	8	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5067	138	intron_retention	FALSE	canonical	1	5091	junction_5	187019.62503874468	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	1	True	ATTAAA	-17
PB.10264.2	chr6	+	2055	3	novel_in_catalog	AL356599.1	novel	268	3	NA	NA	-5	853	no_combination_of_known_junctions	FALSE	canonical	1	4524	junction_2	6982.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	-5	True	NA	NA
PB.7641.15	chr22	+	3557	10	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5067	10918	any annotated donor/acceptor	FALSE	canonical	1	5091	junction_6	182643.87871848684	NA	3	1	TRUE	NA	NA	NA	B	coding	135	408	1214	1621	25.0	1	True	AATAAA	-21
PB.7641.14	chr22	+	3222	9	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5075	2035	any annotated donor/acceptor	FALSE	canonical	1	5091	junction_6	184952.982650997	NA	2	NA	TRUE	NA	NA	NA	B	coding	107	324	2312	2635	25.0	-7	True	NA	NA
PB.7641.17	chr22	+	2888	4	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5067	-709	intron_retention	FALSE	canonical	1	56	junction_3	252606.09569094374	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	1	True	AGTAAA	-15
PB.7641.16	chr22	+	3197	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5067	-709	intron_retention	FALSE	canonical	1	13121	junction_3	249316.00586843095	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	1	True	AGTAAA	-15
PB.7641.11	chr22	+	3250	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5077	-709	intron_retention	FALSE	canonical	1	19018	junction_1	228445.67660865787	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-9	True	AGTAAA	-15
PB.7641.10	chr22	+	3088	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5078	-709	intron_retention	FALSE	canonical	1	13121	junction_3	228778.30849645688	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-10	True	AGTAAA	-15
PB.7641.13	chr22	+	3591	6	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5076	138	intron_retention	FALSE	canonical	1	13121	junction_3	209721.1017791009	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-8	True	ATTAAA	-17
PB.7641.12	chr22	+	2228	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5077	-1611	intron_retention	FALSE	canonical	1	122360	junction_4	190993.37243606124	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-9	True	ATTAAA	-21
PB.9117.1	chr5	+	2754	13	full-splice_match	EXOC3	ENST00000512944.5	2825	13	62	9	-13	2	multi-exon	FALSE	canonical	1	158265	junction_1	148145.43859882723	NA	2	NA	TRUE	NA	NA	NA	A	coding	745	2238	128	2365	45.0	-5429	False	ATTAAA	-21
PB.8996.1	chr4	-	6840	5	novel_not_in_catalog	MAML3	novel	6844	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	3689	junction_2	25936.34140906346	NA	4	NA	TRUE	NA	NA	NA	A	coding	1137	3414	858	4271	35.0	-1	True	AATAAA	-16
PB.826.2	chr1	-	2343	10	novel_in_catalog	MEF2D	novel	5598	10	NA	NA	-13	0	intron_retention	FALSE	canonical	1	316334	junction_9	89346.3589626155	NA	0	NA	TRUE	NA	NA	NA	B	coding	513	1542	446	1987	20.0	-18	True	ATTAAA	-22
PB.826.1	chr1	-	2172	11	novel_in_catalog	MEF2D	novel	5598	10	NA	NA	20	149	combination_of_known_junctions	FALSE	canonical	1	316334	junction_10	85110.24844923202	NA	0	NA	TRUE	NA	NA	NA	B	coding	514	1545	462	2006	25.0	-34	True	NA	NA
PB.1043.3	chr1	-	2342	8	novel_not_in_catalog	ADIPOR1	novel	2177	8	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	13551	junction_7	504517.291187875	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	470	1597	20.0	-4	True	AATAAA	-35
PB.5284.6	chr17	+	2020	2	full-splice_match	SYNGR2	ENST00000591770.1	864	2	-9	-1147	-1	2	multi-exon	FALSE	canonical	1	979483	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	17	478	15.0	20	True	AATAAA	-16
PB.5284.7	chr17	+	1480	4	full-splice_match	SYNGR2	ENST00000590201.1	2239	4	-42	801	-42	7	multi-exon	FALSE	canonical	1	64908	junction_1	285455.46233383275	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	184	690	25.0	-2449	False	AATAAA	-21
PB.5284.4	chr17	+	2555	5	novel_not_in_catalog	SYNGR2	novel	2325	4	NA	NA	16	3707	intron_retention	FALSE	non_canonical	0	0	junction_4	358140.57675199275	NA	1	1	TRUE	NA	NA	NA	C	coding	224	675	44	718	45.0	-7	True	ATTAAA	-23
PB.5284.5	chr17	+	1922	5	novel_not_in_catalog	SYNGR2	novel	2325	4	NA	NA	-13	316	any annotated donor/acceptor	FALSE	canonical	1	8752	junction_4	354604.0205415754	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	37	711	15.0	0	True	NA	NA
PB.5284.2	chr17	+	1375	3	full-splice_match	SYNGR2	ENST00000589168.1	2125	3	-58	808	2	0	multi-exon	FALSE	canonical	1	274280	junction_2	352601.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	58	465	20.0	-3005	False	AATAAA	-14
PB.5284.3	chr17	+	1599	3	full-splice_match	SYNGR2	ENST00000588282.5	1553	3	-44	-2	9	2	multi-exon	FALSE	canonical	1	643551	junction_2	167966.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	51	878	15.0	-14	True	AATAAA	-16
PB.5284.1	chr17	+	1501	4	full-splice_match	SYNGR2	ENST00000225777.7	2325	4	23	801	-13	7	multi-exon	FALSE	canonical	1	643551	junction_2	147879.51589272488	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	37	711	25.0	0	True	AATAAA	-21
PB.10955.2	chr7	-	3964	29	full-splice_match	NCAPG2	ENST00000409423.5	3957	29	-3	-4	-3	1	multi-exon	FALSE	canonical	1	8228	junction_28	120884.39286496151	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3432	177	3608	30.0	-5	True	AATAAA	-16
PB.4920.1	chr17	-	3968	26	full-splice_match	MYO19	ENST00000614623.4	4054	26	75	11	14	-4	multi-exon	FALSE	canonical	1	200662	junction_14	53775.33893226523	NA	0	NA	TRUE	NA	NA	NA	C	coding	970	2913	449	3361	50.0	2	True	AGTAAA	-7
PB.4920.2	chr17	-	4076	27	novel_not_in_catalog	MYO19	novel	4054	26	NA	NA	-25	-4	any annotated donor/acceptor	FALSE	canonical	1	5412	junction_26	115483.27267950641	NA	8	1	TRUE	NA	NA	NA	C	coding	998	2997	473	3469	50.0	598	False	AGTAAA	-7
PB.4920.3	chr17	-	3818	26	full-splice_match	MYO19	ENST00000614623.4	4054	26	113	123	-7	-1	multi-exon	FALSE	canonical	1	200662	junction_14	53775.33893226523	NA	0	NA	TRUE	NA	NA	NA	C	coding	970	2913	411	3323	35.0	-8	True	ATTAAA	-19
PB.10955.6	chr7	-	3984	27	novel_in_catalog	NCAPG2	novel	4134	30	NA	NA	3	0	intron_retention	FALSE	canonical	1	90632	junction_26	100149.60297954286	NA	1	NA	TRUE	NA	NA	NA	C	coding	843	2532	118	2649	30.0	1	True	AATAAA	-15
PB.10955.7	chr7	-	3732	27	novel_in_catalog	NCAPG2	novel	4134	30	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	1	56537	junction_4	114521.52734691334	NA	0	NA	TRUE	NA	NA	NA	C	coding	1096	3291	87	3377	30.0	32	True	AATAAA	-15
PB.10955.4	chr7	-	3814	26	novel_in_catalog	NCAPG2	novel	4134	30	NA	NA	27	1	intron_retention	TRUE	canonical	1	56537	junction_4	116765.7362057894	NA	3	1	TRUE	NA	NA	NA	C	coding	843	2532	88	2619	30.0	31	True	AATAAA	-16
PB.5699.1	chr19	+	2550	1	full-splice_match	AC114271.1	ENST00000612689.1	2813	1	262	1	262	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	135	408	536	943	35.0	-3	True	AATAAA	-21
PB.10444.1	chr7	-	2706	4	novel_not_in_catalog	CYCS	novel	4098	3	NA	NA	48	-15	any annotated donor/acceptor	FALSE	canonical	1	25	junction_1	1026634.1630767126	NA	2	1	TRUE	NA	NA	NA	C	coding	105	318	123	440	80.0	52	False	NA	NA
PB.11841.8	chr9	+	2350	2	incomplete-splice_match	PTPA	ENST00000432651.5	857	3	71	3270	0	1082	3prime_fragment	FALSE	canonical	1	49960	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	59	514	95.0	0	True	NA	NA
PB.10444.3	chr7	-	1196	3	full-splice_match	CYCS	ENST00000305786.6	4098	3	103	2799	2	417	multi-exon	FALSE	canonical	1	1461939	junction_1	520524.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	68	385	40.0	1	True	ATTAAA	-18
PB.10444.2	chr7	-	2373	4	novel_not_in_catalog	CYCS	novel	4098	3	NA	NA	-5	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1026644.8909090016	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	75	392	80.0	-6	True	NA	NA
PB.10444.4	chr7	-	1028	3	full-splice_match	CYCS	ENST00000305786.6	4098	3	63	3007	-38	209	multi-exon	FALSE	canonical	1	1461939	junction_1	520524.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	108	425	40.0	67	False	ATTAAA	-19
PB.11682.2	chr9	+	5845	10	novel_not_in_catalog	TGFBR1	novel	533	3	NA	NA	6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	101374.89060139323	NA	5	1	TRUE	NA	NA	NA	C	coding	434	1305	199	1503	25.0	1	True	AATAAA	-14
PB.11682.3	chr9	+	5463	7	novel_in_catalog	TGFBR1	novel	533	3	NA	NA	6	-5	no_combination_of_known_junctions	FALSE	canonical	1	1341	junction_1	107598.22520131186	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	90	1124	25.0	1	True	AATAAA	-11
PB.9858.4	chr6	+	3739	17	incomplete-splice_match	DDR1	ENST00000376569.7	3783	18	434	2	-44	0	5prime_fragment	FALSE	canonical	1	140287	junction_1	259584.74515601806	NA	1	NA	TRUE	NA	NA	NA	C	coding	855	2568	314	2881	15.0	-57	True	AATAAA	-16
PB.635.22	chr1	-	3717	20	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	3	-20	any annotated donor/acceptor	TRUE	canonical	1	2313	junction_17	1733419.517575078	NA	23	2	TRUE	NA	NA	NA	C	coding	767	2304	577	2880	90.0	597	False	NA	NA
PB.11682.4	chr9	+	5292	9	full-splice_match	TGFBR1	ENST00000374994.8	6516	9	28	1196	6	-653	multi-exon	FALSE	canonical	1	70203	junction_1	74622.71506719654	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	90	1601	45.0	1	True	NA	NA
PB.11682.5	chr9	+	5901	9	full-splice_match	TGFBR1	ENST00000552516.5	5933	9	21	11	21	-2	multi-exon	FALSE	canonical	1	22223	junction_2	102074.56415502101	NA	1	1	TRUE	NA	NA	NA	C	coding	507	1524	36	1559	25.0	55	True	AATAAA	-14
PB.10994.13	chr8	+	3751	11	incomplete-splice_match	VPS37A	ENST00000324849.8	4906	12	388	9326	21	2087	3prime_fragment	FALSE	canonical	1	88813	junction_3	74165.82456826055	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	287	1480	35.0	1	True	NA	NA
PB.9858.3	chr6	+	3893	18	full-splice_match	DDR1	ENST00000376568.7	3894	18	3	-2	3	1	multi-exon	FALSE	canonical	1	140287	junction_1	251592.99429547033	NA	5	NA	TRUE	NA	NA	NA	C	coding	892	2679	356	3034	10.0	-4970	False	AATAAA	-17
PB.11682.8	chr9	+	4883	4	incomplete-splice_match	TGFBR1	ENST00000550253.1	1538	9	16814	-4306	16796	-2	5prime_fragment	FALSE	canonical	1	259266	junction_1	34771.32355196672	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	164	541	25.0	-6682	False	AATAAA	-14
PB.10994.10	chr8	+	2700	12	full-splice_match	VPS37A	ENST00000324849.8	4906	12	379	1827	12	920	multi-exon	FALSE	canonical	1	88813	junction_3	96305.40970087243	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	296	1489	45.0	-8	True	AATAAA	-9
PB.8988.2	chr4	+	2330	4	novel_not_in_catalog	NOCT	novel	1952	3	NA	NA	-8	1704	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	66734.80216998224	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	202	1497	15.0	0	True	AATAAA	-16
PB.8988.3	chr4	+	1754	4	novel_not_in_catalog	NOCT	novel	1952	3	NA	NA	-7	1704	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	66734.80216998224	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	201	1496	15.0	1	True	AATAAA	-16
PB.9858.2	chr6	+	3914	20	novel_in_catalog	DDR1	novel	574	4	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	6827	junction_1	314409.1445271137	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	315	3056	15.0	7	True	AATAAA	-16
PB.6389.15	chr2	+	4504	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	256	133	98	-123	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	17	1000	25.0	-5	True	AATAAA	-28
PB.8473.8	chr3	+	4520	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	535	0	no_combination_of_known_junctions	FALSE	canonical	1	9598	junction_1	403699.16118926177	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	181	1107	25.0	25	True	AATAAA	-37
PB.6630.15	chr2	-	5056	6	novel_in_catalog	STARD7	novel	3368	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	783379	junction_5	336904.72603547724	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	2747	3193	40.0	-2	True	AATAAA	-18
PB.11542.2	chr9	+	1715	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	122	2683	-34	0	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-2	True	NA	NA
PB.7210.14	chr20	-	2784	4	novel_not_in_catalog	ACSS1	novel	3509	13	NA	NA	9	-10770	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	108387.81368565175	NA	2	1	TRUE	NA	NA	NA	C	coding	261	786	72	857	95.0	0	True	NA	NA
PB.7210.13	chr20	-	2751	13	novel_in_catalog	ACSS1	novel	3509	13	NA	NA	48	-1028	intron_retention	FALSE	canonical	1	191275	junction_8	59177.2636195693	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	33	1784	30.0	4	True	NA	NA
PB.6630.12	chr2	-	2409	9	novel_not_in_catalog	STARD7	novel	3368	8	NA	NA	-22	0	any annotated donor/acceptor	FALSE	canonical	1	4218	junction_1	525412.9915672141	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	414	1544	40.0	1	True	AATAAA	-18
PB.335.2	chr1	-	2459	1	novel_in_catalog	HIVEP3	novel	12216	8	NA	NA	-39143	-106355	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	164	495	579	1073	85.0	4349	False	NA	NA
PB.2174.9	chr11	+	1870	15	full-splice_match	UVRAG	ENST00000356136.7	4123	15	45	2208	45	-513	multi-exon	FALSE	canonical	1	125686	junction_1	42021.29457380107	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1674	197	1870	75.0	2	True	NA	NA
PB.2174.8	chr11	+	3711	16	novel_in_catalog	UVRAG	novel	4123	15	NA	NA	43	-1	combination_of_known_junctions	FALSE	canonical	1	5623	junction_11	77244.77650039228	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	199	1308	15.0	0	True	AATAAA	-16
PB.7877.2	chr22	+	2105	6	full-splice_match	PIM3	ENST00000360612.4	2369	6	260	4	5	-4	multi-exon	FALSE	canonical	1	472965	junction_1	250807.56206031746	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	176	1156	25.0	1	True	ATTAAA	-20
PB.7877.3	chr22	+	2196	5	incomplete-splice_match	PIM3	ENST00000360612.4	2369	6	242	5	-13	-5	intron_retention	FALSE	canonical	1	472965	junction_1	224624.0072593533	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	194	1042	25.0	-1878	False	ATTAAA	-19
PB.7877.4	chr22	+	1908	6	novel_not_in_catalog	PIM3	novel	2369	6	NA	NA	-13	-6	any annotated donor/acceptor	FALSE	canonical	1	6836	junction_3	391766.04872520536	NA	10	1	TRUE	NA	NA	NA	C	coding	255	768	194	961	25.0	-1878	False	ATTAAA	-18
PB.7877.5	chr22	+	2259	4	novel_in_catalog	PIM3	novel	2369	6	NA	NA	4	-7	intron_retention	FALSE	canonical	1	472965	junction_1	272731.10281129775	NA	0	NA	TRUE	NA	NA	NA	C	coding	86	261	177	437	25.0	0	True	ATTAAA	-17
PB.7877.6	chr22	+	1938	5	novel_not_in_catalog	PIM3	novel	2369	6	NA	NA	6	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	440490.0538010904	NA	1	1	TRUE	NA	NA	NA	C	coding	89	270	726	995	25.0	2	True	ATTAAA	-14
PB.7877.7	chr22	+	1538	1	novel_in_catalog	PIM3	novel	2369	6	NA	NA	1765	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-8528	False	ATTAAA	-14
PB.2174.1	chr11	+	4090	15	full-splice_match	UVRAG	ENST00000356136.7	4123	15	19	14	19	-14	multi-exon	FALSE	canonical	1	125686	junction_1	42021.29457380107	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	223	2322	65.0	-24	True	NA	NA
PB.12313.1	chrX	+	2141	3	full-splice_match	MAGEA4	ENST00000276344.6	1724	3	-420	3	-40	-3	multi-exon	FALSE	canonical	1	6354	junction_1	39154.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	639	1592	15.0	-21	True	AATAAA	-14
PB.12313.2	chrX	+	1727	3	novel_not_in_catalog	MAGEA4	novel	854	4	NA	NA	25	-2	any annotated donor/acceptor	FALSE	canonical	1	353	junction_2	1290.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	140	1177	15.0	4061	False	AATAAA	-15
PB.2174.2	chr11	+	3416	15	full-splice_match	UVRAG	ENST00000356136.7	4123	15	21	686	21	-142	multi-exon	FALSE	canonical	1	125686	junction_1	42021.29457380107	NA	2	NA	TRUE	NA	NA	NA	C	coding	699	2100	221	2320	25.0	-22	True	ATTAAA	-24
PB.2174.5	chr11	+	4929	15	full-splice_match	UVRAG	ENST00000356136.7	4123	15	230	-1036	230	1036	multi-exon	FALSE	canonical	1	125686	junction_1	42021.29457380107	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	12	2111	35.0	187	False	AATAAA	-15
PB.12313.5	chrX	+	1794	2	incomplete-splice_match	MAGEA4	ENST00000431971.1	997	3	58	-780	58	-2	intron_retention	FALSE	canonical	1	614	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	207	1244	15.0	6071	False	AATAAA	-15
PB.2174.7	chr11	+	3285	7	novel_not_in_catalog	UVRAG	novel	4123	15	NA	NA	41	-1535	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	65414.528607947635	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	201	797	80.0	-2	True	NA	NA
PB.12313.7	chrX	+	1784	3	novel_not_in_catalog	MAGEA4	novel	854	4	NA	NA	677	-3	any annotated donor/acceptor	FALSE	canonical	1	33767	junction_1	25447.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	317	954	282	1235	15.0	6690	False	AATAAA	-14
PB.810.8	chr1	+	1820	2	novel_not_in_catalog	SYT11	novel	5240	4	NA	NA	22288	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-2161	False	AATAAA	-15
PB.810.5	chr1	+	3688	5	novel_not_in_catalog	SYT11	novel	5240	4	NA	NA	21	-153	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	157582.94806446382	NA	1	1	TRUE	NA	NA	NA	C	coding	430	1293	233	1525	80.0	28	True	AATAAA	-20
PB.810.4	chr1	+	3912	5	novel_not_in_catalog	SYT11	novel	5240	4	NA	NA	14	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	179530.35297460845	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	240	1535	25.0	21	True	AATAAA	-21
PB.8400.5	chr3	-	2141	6	novel_in_catalog	ASTE1	novel	2504	7	NA	NA	11	-232	intron_retention	FALSE	canonical	1	2857	junction_5	27384.637360388762	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1881	259	2139	75.0	776	False	NA	NA
PB.8400.4	chr3	-	2348	6	full-splice_match	ASTE1	ENST00000264992.7	2664	6	-23	339	-23	-232	multi-exon	FALSE	canonical	1	40121	junction_5	13035.47393231255	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1881	466	2346	75.0	-62	True	NA	NA
PB.8400.3	chr3	-	2486	6	full-splice_match	ASTE1	ENST00000264992.7	2664	6	12	166	2	-59	multi-exon	FALSE	canonical	1	40121	junction_5	13035.47393231255	NA	1	NA	TRUE	NA	NA	NA	C	coding	679	2040	431	2470	45.0	-27	True	AATAAA	-16
PB.8400.2	chr3	-	2682	6	full-splice_match	ASTE1	ENST00000264992.7	2664	6	-23	5	-23	-5	multi-exon	FALSE	canonical	1	40121	junction_5	13035.47393231255	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	466	2505	30.0	-62	True	AATAAA	-14
PB.8400.1	chr3	-	2747	7	novel_not_in_catalog	ASTE1	novel	2504	7	NA	NA	-23	-4	intron_retention	FALSE	canonical	1	12048	junction_3	28891.07244125001	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	470	2032	30.0	-62	True	AATAAA	-15
PB.810.2	chr1	+	5246	4	full-splice_match	SYT11	ENST00000368324.4	5240	4	-7	1	-7	-1	multi-exon	FALSE	canonical	1	309058	junction_1	71442.85712993909	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	261	1556	25.0	0	True	AATAAA	-23
PB.4778.1	chr17	-	3757	24	full-splice_match	ELAC2	ENST00000338034.8	3148	24	169	-778	3	778	multi-exon	FALSE	canonical	1	455733	junction_14	122770.0220266472	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	117	2552	30.0	8	True	AATAAA	-18
PB.8302.6	chr3	-	4136	7	novel_in_catalog	NEPRO	novel	4992	9	NA	NA	4	-4	intron_retention	FALSE	canonical	1	125253	junction_6	86596.61098064596	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	2457	3521	35.0	-12	True	ATTAAA	-19
PB.4778.3	chr17	-	2974	24	full-splice_match	ELAC2	ENST00000338034.8	3148	24	170	4	4	-2	multi-exon	FALSE	canonical	1	455733	junction_14	122770.0220266472	NA	89	11	TRUE	NA	NA	NA	C	coding	811	2436	116	2551	15.0	9	True	AATAAA	-11
PB.4778.2	chr17	-	3510	24	full-splice_match	ELAC2	ENST00000338034.8	3148	24	173	-535	7	535	multi-exon	FALSE	canonical	1	455733	junction_14	122770.0220266472	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	113	2548	40.0	12	True	NA	NA
PB.379.20	chr1	-	2505	12	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	76	-184	any annotated donor/acceptor	FALSE	canonical	1	215	junction_11	235005.16976922966	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	315	1739	25.0	16	True	AATAAA	-18
PB.4778.4	chr17	-	2781	24	novel_in_catalog	ELAC2	novel	2737	16	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	1	43204	junction_23	174361.08059124084	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	151	2349	5.0	3	True	AATAAA	-20
PB.4778.7	chr17	-	3637	23	novel_in_catalog	ELAC2	novel	2737	16	NA	NA	-6	0	intron_retention	FALSE	canonical	1	460460	junction_16	117569.94735465014	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	1758	3212	15.0	-1	True	AATAAA	-13
PB.4778.6	chr17	-	2878	23	full-splice_match	ELAC2	ENST00000426905.7	2671	23	-36	-171	-14	2	multi-exon	FALSE	canonical	1	14973	junction_17	179291.60823950305	NA	2	NA	TRUE	NA	NA	NA	C	coding	771	2316	134	2449	5.0	-9	True	AATAAA	-17
PB.10941.1	chr7	-	5713	18	novel_in_catalog	KMT2C	novel	11186	22	NA	NA	-318	-1	combination_of_known_junctions	FALSE	canonical	1	113652	junction_16	81875.2120647667	NA	1	NA	TRUE	NA	NA	NA	B	coding	1258	3777	31	3807	20.0	NA	False	AATAAA	-17
PB.10941.3	chr7	-	3428	8	incomplete-splice_match	KMT2C	ENST00000424877.5	5874	18	14609	-606	6280	-2	5prime_fragment	FALSE	canonical	1	195977	junction_5	79527.87707952168	NA	1	NA	TRUE	NA	NA	NA	B	coding	448	1347	177	1523	25.0	NA	False	AATAAA	-16
PB.10941.5	chr7	-	3076	8	incomplete-splice_match	KMT2C	ENST00000424877.5	5874	18	14348	7	6019	-7	5prime_fragment	FALSE	canonical	1	195977	junction_5	79527.87707952168	NA	1	1	TRUE	NA	NA	NA	B	coding	553	1662	123	1784	65.0	NA	False	NA	NA
PB.10704.12	chr7	+	2943	5	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	40	1	no_combination_of_known_junctions	FALSE	canonical	1	17640	junction_1	38317.21386335389	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	218	2512	10.0	0	True	AGTAAA	-16
PB.7867.7	chr22	+	2388	11	novel_in_catalog	GTSE1	novel	3112	12	NA	NA	174	166	no_combination_of_known_junctions	FALSE	canonical	1	31072	junction_2	89496.82649479812	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	440	2200	65.0	45	True	NA	NA
PB.7867.6	chr22	+	2879	11	novel_in_catalog	GTSE1	novel	3112	12	NA	NA	174	-1	no_combination_of_known_junctions	FALSE	canonical	1	31072	junction_2	89496.82649479812	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	440	2200	25.0	45	True	AATAAA	-18
PB.7867.5	chr22	+	2977	12	full-splice_match	GTSE1	ENST00000454366.1	3112	12	134	1	134	-1	multi-exon	FALSE	canonical	1	37772	junction_1	73425.59702973856	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	79	2298	25.0	5	True	AATAAA	-18
PB.7867.4	chr22	+	4515	13	novel_in_catalog	GTSE1	novel	3112	12	NA	NA	134	2886	no_combination_of_known_junctions	FALSE	canonical	1	37772	junction_1	75696.93565994303	NA	5	NA	TRUE	NA	NA	NA	C	coding	739	2220	79	2298	25.0	5	True	NA	NA
PB.7867.3	chr22	+	2599	11	novel_in_catalog	GTSE1	novel	3112	12	NA	NA	129	-326	no_combination_of_known_junctions	TRUE	canonical	1	31072	junction_2	89496.82649479812	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	485	2245	85.0	0	True	NA	NA
PB.7867.2	chr22	+	2654	12	full-splice_match	GTSE1	ENST00000454366.1	3112	12	132	326	132	-326	multi-exon	FALSE	canonical	1	37772	junction_1	73425.59702973856	NA	1	NA	TRUE	NA	NA	NA	C	coding	739	2220	81	2300	85.0	3	True	NA	NA
PB.7867.1	chr22	+	2484	12	full-splice_match	GTSE1	ENST00000454366.1	3112	12	136	492	136	166	multi-exon	FALSE	canonical	1	37772	junction_1	73425.59702973856	NA	1	NA	TRUE	NA	NA	NA	C	coding	739	2220	77	2296	65.0	7	True	NA	NA
PB.7118.5	chr2	+	2566	10	full-splice_match	D2HGDH	ENST00000321264.8	2617	10	49	2	-2	0	multi-exon	FALSE	canonical	1	103287	junction_6	61720.087340616534	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	161	1726	10.0	-2	True	AGTAAA	-17
PB.10704.14	chr7	+	3742	6	incomplete-splice_match	ZKSCAN5	ENST00000451158.5	3111	7	580	-2	1	2	5prime_fragment	FALSE	canonical	1	36774	junction_3	25505.36227541181	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	797	3310	15.0	-5	True	AGTAAA	-17
PB.8248.9	chr3	+	3258	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	118	-87	23	87	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	94	1116	40.0	-27	True	NA	NA
PB.913.1	chr1	-	3169	1	incomplete-splice_match	GPR161	ENST00000539777.5	7655	5	53996	0	6854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	ATTAAA	-19
PB.7867.9	chr22	+	2884	11	novel_in_catalog	GTSE1	novel	3112	12	NA	NA	184	166	intron_retention	FALSE	canonical	1	127997	junction_1	55530.531353121405	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	477	2696	65.0	-343	False	NA	NA
PB.5475.5	chr18	-	2114	1	novel_in_catalog	RPL17-C18orf32	novel	1440	7	NA	NA	979	-6318	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	1935	False	AATAAA	-8
PB.981.21	chr1	+	6108	25	novel_in_catalog	SMG7	novel	1190	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	7585	junction_2	154331.35943787545	NA	4	1	TRUE	NA	NA	NA	C	coding	1099	3300	550	3849	20.0	-5	True	ATTAAA	-18
PB.674.8	chr1	+	2833	5	incomplete-splice_match	POLR3C	ENST00000369294.5	1590	12	20	11695	20	-2558	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	195	893	75.0	-23	True	NA	NA
PB.10932.9	chr7	-	4185	1	genic	FASTK	novel	NA	NA	NA	NA	-14	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	148	447	908	1354	15.0	-9	True	ATTAAA	-15
PB.10932.8	chr7	-	1794	10	full-splice_match	FASTK	ENST00000297532.10	1827	10	35	-2	-14	0	multi-exon	FALSE	canonical	1	304787	junction_9	170853.01777778985	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	146	1693	15.0	-9	True	ATTAAA	-16
PB.1259.1	chr1	-	2635	9	novel_in_catalog	ZNF692	novel	2704	10	NA	NA	0	1	intron_retention	FALSE	canonical	1	104376	junction_8	125474.87197617498	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	1705	2430	25.0	-1	True	AATAAA	-18
PB.10932.7	chr7	-	2619	9	incomplete-splice_match	FASTK	ENST00000297532.10	1827	10	-28	-2	-6	0	intron_retention	FALSE	canonical	1	653770	junction_2	88181.39638977147	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	971	2518	15.0	1	True	ATTAAA	-16
PB.696.11	chr1	+	3338	13	novel_not_in_catalog	GPR89B	novel	1934	14	NA	NA	-14	12	intron_retention	FALSE	non_canonical	0	0	junction_8	19110.18792043047	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	116	847	30.0	0	True	ATTAAA	-27
PB.3046.8	chr13	-	7448	23	full-splice_match	XPO4	ENST00000255305.10	9921	23	62	2411	-1	-2410	multi-exon	FALSE	non_canonical	0	0	junction_3	49435.71142530502	NA	3	NA	TRUE	NA	NA	NA	C	coding	1150	3453	14	3466	30.0	-3	True	AATAAA	-11
PB.3046.9	chr13	-	7027	23	full-splice_match	XPO4	ENST00000255305.10	9921	23	56	2838	-7	-2837	multi-exon	FALSE	non_canonical	0	0	junction_3	49435.71142530502	NA	0	NA	TRUE	NA	NA	NA	C	coding	1150	3453	20	3472	30.0	-9	True	AATAAA	-19
PB.10932.6	chr7	-	2915	6	novel_in_catalog	FASTK	novel	1609	9	NA	NA	-8	0	intron_retention	FALSE	canonical	1	657720	junction_4	67622.88344813463	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	902	2107	15.0	-3	True	ATTAAA	-16
PB.8248.8	chr3	+	4701	7	novel_not_in_catalog	NSUN3	novel	3289	6	NA	NA	9	3284	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	47054.024229838426	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	108	1130	30.0	-41	True	AATAAA	-13
PB.3046.7	chr13	-	7711	20	novel_in_catalog	XPO4	novel	9921	23	NA	NA	2	-1802	no_combination_of_known_junctions	TRUE	canonical	1	22733	junction_1	48464.571413779464	NA	10	1	TRUE	NA	NA	NA	C	coding	1036	3111	11	3121	30.0	0	True	ATTAAA	-12
PB.3046.1	chr13	-	8331	23	full-splice_match	XPO4	ENST00000255305.10	9921	23	43	1547	7	-1546	multi-exon	TRUE	non_canonical	0	0	junction_3	49435.71142530502	NA	0	NA	TRUE	NA	NA	NA	C	coding	1150	3453	33	3485	15.0	1	True	CATAAA	-42
PB.3046.3	chr13	-	8079	23	full-splice_match	XPO4	ENST00000255305.10	9921	23	41	1801	5	-1800	multi-exon	FALSE	non_canonical	0	0	junction_3	49435.71142530502	NA	1	NA	TRUE	NA	NA	NA	C	coding	1150	3453	35	3487	30.0	-1	True	ATTAAA	-14
PB.1105.1	chr1	-	5562	2	full-splice_match	SLC30A1	ENST00000367001.4	5474	2	-151	63	-151	-63	multi-exon	FALSE	canonical	1	235891	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	282	1805	15.0	323	False	TATAAA	-18
PB.9957.6	chr6	+	1410	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-6	2818	-5	4	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	123	617	25.0	0	True	ATTAAA	-24
PB.8783.4	chr4	+	3173	5	full-splice_match	SRD5A3	ENST00000264228.8	4190	5	133	884	133	-884	multi-exon	FALSE	canonical	1	166010	junction_1	39257.8842487404	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	96	1052	30.0	-26	True	AATAAA	-18
PB.8783.3	chr4	+	4058	5	full-splice_match	SRD5A3	ENST00000264228.8	4190	5	133	-1	133	1	multi-exon	FALSE	canonical	1	166010	junction_1	39257.8842487404	NA	6	NA	TRUE	NA	NA	NA	C	coding	318	957	96	1052	40.0	-26	True	ATTAAA	-18
PB.8783.2	chr4	+	1278	5	full-splice_match	SRD5A3	ENST00000264228.8	4190	5	125	2787	125	-1	multi-exon	FALSE	canonical	1	166010	junction_1	39257.8842487404	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	104	1060	10.0	-34	True	AATAAA	-20
PB.8783.1	chr4	+	2289	5	full-splice_match	SRD5A3	ENST00000264228.8	4190	5	168	1733	-135	1053	multi-exon	FALSE	canonical	1	166010	junction_1	39257.8842487404	NA	3	NA	TRUE	NA	NA	NA	C	coding	318	957	61	1017	70.0	9	True	AATAAA	-11
PB.10932.2	chr7	-	2953	7	novel_in_catalog	FASTK	novel	1609	9	NA	NA	-45	3	intron_retention	FALSE	canonical	1	657720	junction_5	85692.0246690956	NA	4	NA	TRUE	NA	NA	NA	C	coding	401	1206	1010	2215	20.0	8589	False	ATTAAA	-19
PB.11023.2	chr8	+	1938	6	full-splice_match	C8orf58	ENST00000614574.4	1955	6	-1	18	-1	-1	multi-exon	FALSE	canonical	1	26162	junction_1	30372.612521151354	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	125	1024	30.0	-1	True	NA	NA
PB.8059.1	chr3	+	2328	3	full-splice_match	ZNF502	ENST00000436624.6	2314	3	-14	0	-11	0	multi-exon	FALSE	canonical	1	10879	junction_1	10278.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	169	1803	100.0	-66	False	NA	NA
PB.9990.4	chr6	-	1676	7	full-splice_match	MRPS10	ENST00000053468.3	2110	7	-3	437	-3	-437	multi-exon	FALSE	canonical	1	100765	junction_5	142603.64289925728	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	20	625	80.0	-8	True	NA	NA
PB.7272.7	chr20	+	2890	4	novel_in_catalog	TGIF2	novel	3432	3	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	1180	junction_3	89819.51683607894	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	158	544	30.0	7	True	AATAAA	-23
PB.3710.1	chr14	+	1534	2	full-splice_match	TMEM121	ENST00000392519.6	1532	2	0	-2	0	2	multi-exon	FALSE	canonical	1	4441	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	319	960	165	1124	5.0	0	True	TTTAAA	-34
PB.9242.1	chr5	-	4047	12	full-splice_match	ERCC8	ENST00000265038.9	2017	12	-13	-2017	0	2016	multi-exon	TRUE	canonical	1	98582	junction_1	14194.59868348253	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	57	1247	85.0	5	True	NA	NA
PB.9242.2	chr5	-	2028	12	full-splice_match	ERCC8	ENST00000265038.9	2017	12	-13	2	0	0	multi-exon	FALSE	canonical	1	98582	junction_1	14194.59868348253	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	57	1247	20.0	5	True	AATAAA	-18
PB.4742.1	chr17	+	2161	11	full-splice_match	SENP3	ENST00000321337.11	2611	11	106	344	106	-45	multi-exon	FALSE	canonical	1	466636	junction_1	165050.23803342425	NA	0	NA	TRUE	NA	NA	NA	A	coding	574	1725	295	2019	20.0	-9	False	TTTAAA	-16
PB.9088.1	chr4	-	3940	2	novel_in_catalog	LINC02362	novel	724	6	NA	NA	3	-2953	intron_retention	FALSE	canonical	1	23927	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	102	309	2447	2755	85.0	-2	True	NA	NA
PB.10190.5	chr6	-	2137	1	genic	MAN1A1	novel	NA	NA	NA	NA	170417	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-15
PB.10190.4	chr6	-	4322	12	incomplete-splice_match	MAN1A1	ENST00000368468.3	5014	13	949	-3	949	3	5prime_fragment	FALSE	canonical	1	283758	junction_11	70905.85650012648	NA	5	NA	TRUE	NA	NA	NA	B	coding	452	1359	351	1709	15.0	1792	False	AATAAA	-17
PB.10190.2	chr6	-	4038	12	novel_not_in_catalog	MAN1A1	novel	5014	13	NA	NA	1595	4	any annotated donor/acceptor	FALSE	canonical	1	1211	junction_11	137008.5850324535	NA	0	NA	TRUE	NA	NA	NA	B	coding	452	1359	66	1424	15.0	-1	True	AATAAA	-18
PB.5204.1	chr17	+	2027	1	full-splice_match	AC005332.4	ENST00000614046.1	2005	1	-28	6	-28	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	104	315	86	400	55.0	0	True	AATAAA	-10
PB.778.4	chr1	+	2985	9	novel_in_catalog	IL6R	novel	1496	7	NA	NA	158	-26	combination_of_known_junctions	FALSE	canonical	1	12450	junction_5	46185.61681140569	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	250	1266	85.0	-44	True	NA	NA
PB.778.5	chr1	+	2715	10	full-splice_match	IL6R	ENST00000368485.7	5914	10	193	3006	163	-433	multi-exon	FALSE	canonical	1	68191	junction_1	27166.910530602807	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	245	1651	30.0	-39	True	TTTAAA	-34
PB.778.6	chr1	+	2849	9	full-splice_match	IL6R	ENST00000344086.8	3217	9	342	26	-50	-26	multi-exon	FALSE	canonical	1	10480	junction_8	48857.15174986539	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	66	1163	85.0	-2093	False	NA	NA
PB.7256.7	chr20	-	3739	19	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	54492	junction_2	233915.977756292	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	27	2393	35.0	-1	True	AATAAA	-36
PB.778.2	chr1	+	5810	10	full-splice_match	IL6R	ENST00000368485.7	5914	10	96	8	66	-8	multi-exon	FALSE	canonical	1	68191	junction_1	27166.910530602807	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	342	1748	50.0	-6	True	AATAAA	-8
PB.778.3	chr1	+	2858	10	full-splice_match	IL6R	ENST00000368485.7	5914	10	155	2901	125	-328	multi-exon	FALSE	canonical	1	68191	junction_1	27166.910530602807	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	283	1689	70.0	5	True	NA	NA
PB.7256.6	chr20	-	3995	18	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	intron_retention	FALSE	canonical	1	379214	junction_17	174358.91465376454	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	27	2393	35.0	-1	True	AATAAA	-36
PB.11702.4	chr9	+	6391	11	full-splice_match	FKTN	ENST00000602661.5	2576	11	-6	-3809	-6	-269	multi-exon	FALSE	canonical	1	14531	junction_1	25992.808189959007	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	223	1608	35.0	-8	True	AATAAA	-10
PB.674.5	chr1	+	3339	15	full-splice_match	POLR3C	ENST00000334163.3	1851	15	-49	-1439	4	1439	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	534	1605	211	1815	60.0	-39	True	NA	NA
PB.327.1	chr1	+	2594	2	full-splice_match	EXO5	ENST00000372703.1	2567	2	-15	-12	-9	12	multi-exon	FALSE	canonical	1	84796	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	373	1122	1090	2211	25.0	-4	True	AATAAA	-30
PB.11466.5	chr9	-	5974	15	novel_in_catalog	PSIP1	novel	3364	16	NA	NA	19	-3	intron_retention	FALSE	canonical	1	122085	junction_7	393249.7451648888	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	293	1273	40.0	-1	True	ATTAAA	-14
PB.11841.1	chr9	+	2822	11	full-splice_match	PTPA	ENST00000337738.5	2845	11	23	0	1	0	multi-exon	FALSE	canonical	1	98493	junction_3	408743.71768193576	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	265	1341	15.0	1	True	ATTAAA	-21
PB.4848.3	chr17	+	3203	6	novel_in_catalog	SARM1	novel	1921	11	NA	NA	-91	2	intron_retention	FALSE	canonical	1	10137	junction_2	52499.53091752344	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	782	1324	10.0	-24	True	AATACA	-19
PB.4848.2	chr17	+	6892	9	full-splice_match	SARM1	ENST00000585482.5	10309	9	399	3018	399	2868	multi-exon	FALSE	canonical	1	51125	junction_1	36126.288668191475	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	24	2147	75.0	-7	True	ATTAAA	-32
PB.4848.1	chr17	+	4043	9	full-splice_match	SARM1	ENST00000585482.5	10309	9	385	5881	385	5	multi-exon	FALSE	canonical	1	51125	junction_1	36126.288668191475	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	38	2161	10.0	-21	False	AATACA	-22
PB.7109.1	chr2	+	2380	2	novel_not_in_catalog	ANO7	novel	4128	25	NA	NA	-7	16189	intron_retention	FALSE	canonical	1	5597	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	1277	1753	100.0	-134	False	NA	NA
PB.8174.7	chr3	-	2765	15	novel_in_catalog	NEK4	novel	6057	16	NA	NA	0	184	combination_of_known_junctions	FALSE	canonical	1	56292	junction_8	62949.69138226532	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	194	2581	60.0	0	True	AAGAAA	-35
PB.8174.6	chr3	-	2908	16	full-splice_match	NEK4	ENST00000233027.9	6057	16	5	3144	2	184	multi-exon	FALSE	canonical	1	24740	junction_8	69834.68953069735	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	199	2724	60.0	-5	True	AAGAAA	-35
PB.4848.4	chr17	+	2759	6	full-splice_match	SARM1	ENST00000585453.5	2919	6	164	-4	8	4	multi-exon	FALSE	canonical	1	59443	junction_2	36953.03761262394	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	72	878	10.0	-3706	False	AATACA	-21
PB.4192.3	chr16	+	2533	4	novel_not_in_catalog	PAQR4	novel	2793	3	NA	NA	27	0	intron_retention	FALSE	canonical	1	8365	junction_3	91002.9508727907	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	379	999	20.0	1	True	AATAAA	-15
PB.4192.2	chr16	+	4074	2	full-splice_match	PAQR4	ENST00000574988.1	869	2	-1705	-1500	3	0	multi-exon	FALSE	canonical	1	231227	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	1926	2540	20.0	-280	False	AATAAA	-15
PB.4192.1	chr16	+	2666	3	full-splice_match	PAQR4	ENST00000293978.12	2644	3	-22	0	3	0	multi-exon	FALSE	canonical	1	12598	junction_1	109314.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	428	1132	20.0	-305	False	AATAAA	-15
PB.11240.3	chr8	-	3211	14	novel_not_in_catalog	RAD54B	novel	3068	15	NA	NA	31074	-1	any annotated donor/acceptor	FALSE	canonical	1	1397	junction_13	34098.13500843198	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	850	3003	35.0	-5	True	AATAAA	-19
PB.533.15	chr1	-	2053	3	full-splice_match	ZNF644	ENST00000498303.5	514	3	-74	-1465	-74	1465	multi-exon	FALSE	canonical	1	100675	junction_2	33703.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1794	259	2052	65.0	134	False	NA	NA
PB.4192.5	chr16	+	4148	1	novel_in_catalog	PAQR4	novel	2793	3	NA	NA	-6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	241	726	1889	2614	20.0	-13	True	AATAAA	-15
PB.4192.4	chr16	+	2549	3	full-splice_match	PAQR4	ENST00000318782.8	2793	3	237	7	-76	0	multi-exon	FALSE	canonical	1	115757	junction_1	57735.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	194	1015	20.0	-71	False	AATAAA	-15
PB.985.6	chr1	+	4537	18	full-splice_match	RGL1	ENST00000360851.3	4724	18	1	186	1	-186	multi-exon	FALSE	canonical	1	88831	junction_2	21613.225221231278	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	178	2484	35.0	1	True	TTTAAA	-24
PB.7256.9	chr20	-	3013	18	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	3145	junction_16	284557.3116151353	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	27	2279	35.0	-1	True	AATAAA	-36
PB.985.4	chr1	+	3381	18	full-splice_match	RGL1	ENST00000360851.3	4724	18	-42	1385	-42	-1385	multi-exon	FALSE	canonical	1	88831	junction_2	21613.225221231278	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	245	2527	65.0	-1506	False	AATGAA	-6
PB.985.5	chr1	+	4413	18	full-splice_match	RGL1	ENST00000360851.3	4724	18	1	310	1	-310	multi-exon	FALSE	canonical	1	88831	junction_2	21613.225221231278	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	178	2484	15.0	1	True	NA	NA
PB.985.2	chr1	+	4977	18	novel_in_catalog	RGL1	novel	5100	19	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	15953	junction_2	41385.06006823249	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	438	2738	30.0	-12	True	AATAAA	-44
PB.985.3	chr1	+	4613	18	full-splice_match	RGL1	ENST00000360851.3	4724	18	111	0	111	0	multi-exon	FALSE	canonical	1	88831	junction_2	21613.225221231278	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	68	2374	30.0	0	True	AATAAA	-44
PB.985.1	chr1	+	5152	20	novel_not_in_catalog	RGL1	novel	5100	19	NA	NA	-35	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	51635.20750477278	NA	8	2	TRUE	NA	NA	NA	C	coding	772	2319	595	2913	30.0	-206	False	AATAAA	-44
PB.2001.1	chr11	-	2560	14	full-splice_match	HNRNPUL2	ENST00000301785.6	5229	14	545	2124	545	-2124	multi-exon	FALSE	canonical	1	1324452	junction_8	261771.4594512825	NA	0	NA	TRUE	NA	NA	NA	A	coding	629	1890	126	2015	25.0	706	False	AATAAA	-29
PB.228.1	chr1	+	1876	9	full-splice_match	TRNAU1AP	ENST00000373830.4	1799	9	-68	-9	-68	9	multi-exon	FALSE	canonical	1	215481	junction_1	77593.97629799864	NA	0	NA	TRUE	NA	NA	NA	A	coding	287	864	95	958	15.0	9	True	AATATA	-16
PB.6789.1	chr2	-	2547	1	intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	37	NA	NA	NA	NA	NA	A	coding	308	924	1624	2547	70.0	5902	False	NA	NA
PB.11441.3	chr9	+	2918	3	incomplete-splice_match	PDCD1LG2	ENST00000397747.4	2365	7	-39	33934	-39	-33934	3prime_fragment	FALSE	canonical	1	62650	junction_2	492.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	288	806	20.0	0	True	NA	NA
PB.2382.1	chr12	-	2371	10	novel_not_in_catalog	WASH8P	novel	1817	11	NA	NA	603	-2	intron_retention	TRUE	canonical	0	0	junction_1	0.0	NA	6	1	TRUE	NA	NA	NA	A	coding	192	579	1	579	35.0	NA	False	AATAAA	-10
PB.8986.2	chr4	-	5154	4	full-splice_match	PCDH18	ENST00000412923.6	5102	4	-77	25	-42	-25	multi-exon	FALSE	canonical	1	140339	junction_3	26014.676900208124	NA	1	NA	TRUE	NA	NA	NA	C	coding	1131	3396	458	3853	80.0	-78	False	AATACA	-41
PB.8986.3	chr4	-	3993	4	full-splice_match	PCDH18	ENST00000344876.8	5906	4	-39	1952	-20	-32	multi-exon	FALSE	canonical	1	56651	junction_3	63762.110135164825	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	436	3834	30.0	-56	True	ATTAAA	-23
PB.742.3	chr1	-	2304	5	novel_in_catalog	VPS72	novel	4267	13	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	1	692933	junction_2	60439.73890785764	NA	2	NA	TRUE	NA	NA	NA	C	coding	236	711	57	767	10.0	3	True	AATAAA	-16
PB.742.2	chr1	-	1387	6	full-splice_match	VPS72	ENST00000368892.8	1527	6	-13	153	-13	5	multi-exon	FALSE	canonical	1	692933	junction_3	79903.89798001097	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	106	1200	10.0	8629	False	AATAAA	-19
PB.742.1	chr1	-	1501	6	full-splice_match	VPS72	ENST00000368892.8	1527	6	22	4	-3	-4	multi-exon	FALSE	canonical	1	692933	junction_3	79903.89798001097	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	71	1165	40.0	-11	True	TATAAA	-20
PB.7855.22	chr22	+	4680	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	0	-597	combination_of_known_junctions	FALSE	canonical	1	24337	junction_1	42110.588279552685	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	595	1917	90.0	48	False	NA	NA
PB.967.2	chr1	+	2832	13	novel_not_in_catalog	QSOX1	novel	9311	12	NA	NA	-12	-3	any annotated donor/acceptor	FALSE	canonical	1	1697	junction_12	417808.9802884075	NA	5	1	TRUE	NA	NA	NA	C	coding	737	2214	51	2264	15.0	-11	False	AATAAA	-16
PB.967.3	chr1	+	2840	13	novel_in_catalog	QSOX1	novel	9311	12	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	93235	junction_12	396533.1847559125	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	44	2149	20.0	-4	True	AATAAA	-17
PB.11441.9	chr9	+	2213	7	novel_not_in_catalog	PDCD1LG2	novel	2365	7	NA	NA	6469	-2	any annotated donor/acceptor	FALSE	canonical	1	5257	junction_1	20905.280366984374	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	36	920	30.0	-4	True	AATAAA	-19
PB.967.1	chr1	+	3320	12	full-splice_match	QSOX1	ENST00000367602.7	9311	12	-6	5997	-6	-1	multi-exon	TRUE	canonical	1	788820	junction_3	230012.52211100978	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	81	2324	20.0	-41	False	AATAAA	-18
PB.967.6	chr1	+	5525	12	full-splice_match	QSOX1	ENST00000367602.7	9311	12	51	3735	-12	2261	multi-exon	FALSE	canonical	1	788820	junction_3	230012.52211100978	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	24	2267	0.0	16	True	NA	NA
PB.8852.4	chr4	+	4154	5	full-splice_match	THAP9	ENST00000302236.9	3808	5	-28	-318	21	318	multi-exon	FALSE	canonical	1	27892	junction_1	5527.848225123407	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	80	2791	15.0	-11	True	AATACA	-15
PB.967.5	chr1	+	2535	13	full-splice_match	QSOX1	ENST00000367600.5	2519	13	-17	1	10	-1	multi-exon	FALSE	canonical	1	611423	junction_12	288607.4277616954	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	29	1843	20.0	11	True	AATAAA	-18
PB.10077.7	chr6	+	3621	10	novel_not_in_catalog	BCKDHB	novel	743	6	NA	NA	25	0	intron_retention	FALSE	canonical	1	1674	junction_1	75009.37041759813	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	187	1155	5.0	1	True	AATAAA	-17
PB.4969.1	chr17	+	1677	1	full-splice_match	AC073508.3	ENST00000619697.1	1419	1	-253	-5	-253	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	10	True	ATTAAA	-21
PB.10077.5	chr6	+	3736	11	novel_not_in_catalog	BCKDHB	novel	743	6	NA	NA	24	0	intron_retention	FALSE	canonical	1	1778	junction_10	93564.21509642455	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	24	1085	5.0	0	True	AATAAA	-17
PB.10077.4	chr6	+	3727	10	novel_not_in_catalog	BCKDHB	novel	743	6	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_9	77488.63688851098	NA	21	2	TRUE	NA	NA	NA	C	coding	348	1047	53	1099	5.0	3	True	AATAAA	-17
PB.10077.3	chr6	+	2526	10	full-splice_match	BCKDHB	ENST00000320393.8	3692	10	-8	1174	-8	-1158	multi-exon	FALSE	canonical	1	149029	junction_1	33741.6644184663	NA	2	NA	TRUE	NA	NA	NA	C	coding	392	1179	56	1234	30.0	0	True	AATAAA	-19
PB.10077.2	chr6	+	3500	10	full-splice_match	BCKDHB	ENST00000320393.8	3692	10	191	1	191	-1	multi-exon	FALSE	canonical	1	149029	junction_1	33741.6644184663	NA	3	NA	TRUE	NA	NA	NA	C	coding	322	969	67	1035	5.0	167	False	AATAAA	-16
PB.10077.1	chr6	+	1541	11	full-splice_match	BCKDHB	ENST00000356489.9	1514	11	-11	-16	-11	0	multi-exon	FALSE	canonical	1	82472	junction_10	52360.16135536635	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	59	1237	5.0	-3	True	AATAAA	-17
PB.7107.13	chr2	-	6318	1	novel_in_catalog	PASK	novel	4572	18	NA	NA	172	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	253	762	1344	2105	30.0	0	True	ATTAAA	-17
PB.30.11	chr1	-	2912	10	novel_in_catalog	NADK	novel	3235	12	NA	NA	38	-7	combination_of_known_junctions	FALSE	canonical	1	24382	junction_4	318125.3420285241	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	168	785	50.0	-1	True	AATAAA	-13
PB.30.16	chr1	-	1958	12	full-splice_match	NADK	ENST00000341426.9	3235	12	-2	1279	-2	-40	multi-exon	FALSE	canonical	1	194595	junction_11	168658.45696143308	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	225	1565	10.0	-24	True	AATAAA	-20
PB.30.17	chr1	-	1951	12	novel_in_catalog	NADK	novel	3235	12	NA	NA	-21	-49	combination_of_known_junctions	FALSE	canonical	1	110879	junction_11	189749.56602870702	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	227	1567	30.0	9122	False	AATAAA	-11
PB.2990.1	chr12	-	3481	12	full-splice_match	ABCB9	ENST00000280560.12	3517	12	33	3	-3	-1	multi-exon	FALSE	canonical	1	37343	junction_9	8505.844023108732	NA	0	NA	TRUE	NA	NA	NA	A	coding	766	2301	265	2565	20.0	-1	True	AATAAA	-20
PB.11240.5	chr8	-	2369	10	incomplete-splice_match	RAD54B	ENST00000336148.9	3068	15	3	19211	3	636	3prime_fragment	FALSE	canonical	1	67422	junction_7	11696.815360611918	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	123	1943	65.0	8	True	NA	NA
PB.8041.2	chr3	-	4092	37	full-splice_match	ULK4	ENST00000301831.8	4613	37	331	190	3	-190	multi-exon	FALSE	canonical	1	15893	junction_1	12651.18394654146	NA	0	NA	TRUE	NA	NA	NA	C	coding	1275	3828	133	3960	20.0	-15	True	AATAAA	-16
PB.8041.3	chr3	-	3286	30	incomplete-splice_match	ULK4	ENST00000301831.8	4613	37	344	416904	-9	136622	3prime_fragment	FALSE	canonical	1	18207	junction_12	13019.91803455901	NA	7	NA	TRUE	NA	NA	NA	C	coding	1037	3114	120	3233	35.0	-2	True	ATTAAA	-20
PB.8041.1	chr3	-	4273	37	full-splice_match	ULK4	ENST00000301831.8	4613	37	347	-7	-6	-1	multi-exon	TRUE	canonical	1	15893	junction_1	12651.18394654146	NA	1	NA	TRUE	NA	NA	NA	C	coding	1275	3828	117	3944	20.0	1	True	AATAAA	-19
PB.8041.4	chr3	-	1896	18	novel_in_catalog	ULK4	novel	4613	37	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	18776	junction_1	13067.22249671087	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	111	1853	10.0	7	True	NA	NA
PB.635.20	chr1	-	3700	20	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-20	any annotated donor/acceptor	FALSE	canonical	1	5151	junction_4	1760242.4795549603	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	447	2348	90.0	-1	True	NA	NA
PB.674.1	chr1	+	3897	15	full-splice_match	POLR3C	ENST00000334163.3	1851	15	-156	-1890	-15	1890	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	534	1605	318	1922	40.0	3	True	NA	NA
PB.2785.7	chr12	-	3654	12	full-splice_match	SLC6A15	ENST00000266682.9	4879	12	55	1170	0	936	multi-exon	FALSE	canonical	1	49885	junction_2	16958.750926637713	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	488	2680	30.0	9	True	AATAAA	-9
PB.2785.6	chr12	-	3942	12	full-splice_match	SLC6A15	ENST00000266682.9	4879	12	99	838	16	-613	multi-exon	FALSE	canonical	1	49885	junction_2	16958.750926637713	NA	2	NA	TRUE	NA	NA	NA	C	coding	730	2193	444	2636	45.0	-15	True	AATAAA	-16
PB.2785.5	chr12	-	4206	12	full-splice_match	SLC6A15	ENST00000266682.9	4879	12	53	620	-2	-395	multi-exon	FALSE	canonical	1	49885	junction_2	16958.750926637713	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	490	2682	40.0	7	True	AATAAA	-25
PB.2785.4	chr12	-	4185	12	full-splice_match	SLC6A15	ENST00000266682.9	4879	12	106	588	23	-363	multi-exon	FALSE	canonical	1	49885	junction_2	16958.750926637713	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	437	2629	50.0	-8	True	ATTAAA	-30
PB.2785.3	chr12	-	4103	11	full-splice_match	SLC6A15	ENST00000552192.5	2221	11	-2	-1880	-2	-1	multi-exon	FALSE	canonical	1	1273	junction_10	27990.33360572896	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	314	2185	25.0	-5	True	AATAAA	-17
PB.2785.2	chr12	-	4567	12	full-splice_match	SLC6A15	ENST00000266682.9	4879	12	95	217	12	8	multi-exon	FALSE	canonical	1	49885	junction_2	16958.750926637713	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	448	2640	30.0	9997	False	AATAAA	-26
PB.2785.1	chr12	-	4763	12	full-splice_match	SLC6A15	ENST00000266682.9	4879	12	113	3	30	-3	multi-exon	FALSE	canonical	1	49885	junction_2	16958.750926637713	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	430	2622	30.0	-1	True	NA	NA
PB.2785.8	chr12	-	3485	12	novel_in_catalog	SLC6A15	novel	4879	12	NA	NA	59	936	no_combination_of_known_junctions	FALSE	canonical	1	447	junction_10	27267.3213508935	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	1000	2511	30.0	28	True	AATAAA	-9
PB.719.3	chr1	-	3429	6	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	-35	-1	intron_retention	FALSE	canonical	1	17684	junction_1	418102.5121163469	NA	3	NA	TRUE	NA	NA	NA	C	coding	253	762	406	1167	25.0	-36	False	AATAAA	-22
PB.719.2	chr1	-	3126	7	full-splice_match	ANP32E	ENST00000583931.5	3451	7	321	4	120	-3	multi-exon	TRUE	canonical	1	780700	junction_5	150888.95244673223	NA	3	NA	TRUE	NA	NA	NA	C	coding	268	807	50	856	30.0	320	False	AATAAA	-20
PB.719.1	chr1	-	3270	6	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	23	-7	intron_retention	FALSE	canonical	1	14224	junction_5	435732.26426758897	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	348	1004	30.0	22	False	AATAAA	-16
PB.719.7	chr1	-	3100	6	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	18	-6	combination_of_known_junctions	FALSE	canonical	1	17684	junction_1	418102.5121163469	NA	3	NA	TRUE	NA	NA	NA	C	coding	253	762	219	980	75.0	0	True	AATAAA	-15
PB.9214.3	chr5	-	2347	12	novel_not_in_catalog	PAIP1	novel	2782	11	NA	NA	204	-19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63282.5824950252	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	4	1257	30.0	0	True	AATAAA	-6
PB.10484.4	chr7	+	2309	13	full-splice_match	SEPT7	ENST00000399034.7	4399	13	289	1801	2	-1	multi-exon	FALSE	canonical	1	60805	junction_1	462118.9043617153	NA	10	1	TRUE	NA	NA	NA	C	coding	384	1155	144	1298	25.0	2	True	AATAAA	-14
PB.719.4	chr1	-	3455	7	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	15707	junction_2	383212.03937220655	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	325	1185	30.0	1	True	AATAAA	-20
PB.719.9	chr1	-	2983	7	full-splice_match	ANP32E	ENST00000616917.4	2989	7	0	6	0	-6	multi-exon	FALSE	canonical	1	8725	junction_6	400567.78919571015	NA	2	NA	TRUE	NA	NA	NA	C	coding	220	663	191	853	75.0	-4	True	AATAAA	-15
PB.719.8	chr1	-	3156	6	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	1	-6	intron_retention	FALSE	canonical	1	14224	junction_5	435732.26426758897	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	370	1026	75.0	0	True	AATAAA	-15
PB.2276.1	chr11	-	2391	15	full-splice_match	ALG9	ENST00000531154.5	1930	15	-455	-6	-19	-2	multi-exon	TRUE	canonical	1	26189	junction_14	85950.68364261366	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	1025	2272	15.0	-20	True	AATAAA	-23
PB.2276.2	chr11	-	2054	15	full-splice_match	ALG9	ENST00000616540.4	2069	15	21	-6	0	-2	multi-exon	FALSE	canonical	1	70424	junction_5	78962.88975027627	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	79	1935	15.0	-11	True	AATAAA	-23
PB.2276.3	chr11	-	2365	15	full-splice_match	ALG9	ENST00000398006.6	2345	15	-15	-5	-15	2	multi-exon	TRUE	canonical	1	26189	junction_14	79747.69873693369	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	1021	2247	10.0	-16	True	AATAAA	-22
PB.2276.4	chr11	-	2204	15	novel_in_catalog	ALG9	novel	4485	6	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	1	8037	junction_14	82626.1762651769	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	860	2086	10.0	-21	True	AATAAA	-22
PB.2276.5	chr11	-	2052	15	full-splice_match	ALG9	ENST00000614444.4	2028	15	-47	23	1	2	multi-exon	FALSE	canonical	1	84579	junction_14	71782.05853704899	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	99	1934	10.0	0	True	AATAAA	-22
PB.2276.6	chr11	-	2199	15	novel_in_catalog	ALG9	novel	4485	6	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	8037	junction_14	88532.0304090386	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	835	2082	10.0	4	True	AATAAA	-21
PB.2276.7	chr11	-	2098	15	novel_in_catalog	ALG9	novel	4485	6	NA	NA	0	4611	combination_of_known_junctions	FALSE	canonical	1	13126	junction_1	81682.72050668029	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	79	1830	5.0	-11	True	NA	NA
PB.1150.8	chr1	-	2532	22	incomplete-splice_match	NVL	ENST00000281701.10	3123	23	247	3899	-1	33	3prime_fragment	FALSE	canonical	1	157670	junction_13	36379.35906907437	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2517	14	2530	55.0	-1	True	AAGAAA	-18
PB.674.3	chr1	+	3575	15	full-splice_match	POLR3C	ENST00000334163.3	1851	15	-57	-1667	-4	1667	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	534	1605	219	1823	60.0	-47	True	NA	NA
PB.4472.1	chr16	+	4160	3	full-splice_match	CKLF-CMTM1	ENST00000532838.1	587	3	-73	-3500	-11	-158	multi-exon	FALSE	canonical	1	8629	junction_2	186396.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	222	669	746	1414	25.0	-6	True	ATTAAA	-19
PB.4472.2	chr16	+	4355	3	full-splice_match	CKLF	ENST00000351137.8	508	3	9	-3856	-4	3677	multi-exon	FALSE	canonical	1	381421	junction_1	187443.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	99	300	139	438	25.0	-4	True	ATTAAA	-19
PB.3842.1	chr15	+	2584	8	full-splice_match	SPATA5L1	ENST00000531970.5	2464	8	-34	-86	10	-6	multi-exon	FALSE	canonical	1	33821	junction_5	45829.343425097315	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	90	1952	25.0	5	True	AATAAA	-16
PB.3842.2	chr15	+	2541	8	full-splice_match	SPATA5L1	ENST00000305560.10	2570	8	23	6	-16	-6	multi-exon	FALSE	canonical	1	93722	junction_1	27681.81671813334	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	77	2338	25.0	18	True	AATAAA	-16
PB.3842.3	chr15	+	2635	9	novel_not_in_catalog	SPATA5L1	novel	2570	8	NA	NA	-16	-12	any annotated donor/acceptor	FALSE	canonical	1	9815	junction_2	64711.939566338915	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	77	1423	80.0	18	True	NA	NA
PB.3842.4	chr15	+	2420	1	novel_in_catalog	SPATA5L1	novel	2570	8	NA	NA	13	-5684	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	392	1179	43	1221	95.0	0	True	NA	NA
PB.2799.1	chr12	-	3584	3	novel_not_in_catalog	LINC01619	novel	2205	6	NA	NA	2644	-1868	intron_retention	FALSE	canonical	1	16	junction_2	2247.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.2200.4	chr11	+	3385	6	full-splice_match	ANKRD42	ENST00000393389.7	4066	6	680	1	21	-1	multi-exon	FALSE	canonical	1	35757	junction_5	29362.642633114614	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	253	849	20.0	21	True	NA	NA
PB.2200.3	chr11	+	3838	6	novel_not_in_catalog	ANKRD42	novel	4066	6	NA	NA	-15	8	any annotated donor/acceptor	FALSE	canonical	1	2845	junction_5	40612.69333398119	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	948	1715	15.0	12	True	NA	NA
PB.2200.2	chr11	+	3356	6	full-splice_match	ANKRD42	ENST00000393389.7	4066	6	-21	731	-21	-731	multi-exon	FALSE	canonical	1	35757	junction_5	29362.642633114614	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	954	1550	40.0	6	True	ATTAAA	-19
PB.3250.9	chr13	-	3608	4	novel_in_catalog	ARGLU1	novel	3390	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	111433	junction_2	816995.5005711816	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	246	1067	30.0	-28	True	AATAAA	-34
PB.3250.8	chr13	-	3573	3	novel_in_catalog	ARGLU1	novel	3390	4	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	8926	junction_2	995339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	285	605	30.0	8456	False	AATAAA	-34
PB.3250.6	chr13	-	2221	4	novel_in_catalog	ARGLU1	novel	3390	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	66845	junction_2	837661.4651026989	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	246	905	25.0	-28	True	AATAAA	-35
PB.3250.4	chr13	-	4008	3	full-splice_match	ARGLU1	ENST00000472226.2	4009	3	-21	22	6	-22	multi-exon	FALSE	canonical	1	1629779	junction_2	184912.5	NA	27	1	TRUE	NA	NA	NA	C	coding	273	822	240	1061	50.0	-22	True	AATAAA	-13
PB.3250.3	chr13	-	4348	3	full-splice_match	ARGLU1	ENST00000472226.2	4009	3	-5	-334	-5	334	multi-exon	FALSE	canonical	1	1629779	junction_2	184912.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	273	822	224	1045	40.0	-6	True	AATAAA	-19
PB.3250.2	chr13	-	3388	4	full-splice_match	ARGLU1	ENST00000400198.7	3390	4	0	2	0	-2	multi-exon	FALSE	canonical	1	682934	junction_2	554467.2992611917	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	246	1067	15.0	-28	True	TATAAA	-15
PB.3250.1	chr13	-	5687	3	full-splice_match	ARGLU1	ENST00000472226.2	4009	3	-23	-1655	4	1	multi-exon	FALSE	canonical	1	1629779	junction_2	184912.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	273	822	242	1063	15.0	-24	True	TATAAA	-18
PB.1246.1	chr1	-	3035	4	full-splice_match	ZNF695	ENST00000339986.7	3340	4	-22	327	15	-327	multi-exon	FALSE	canonical	1	53120	junction_1	2784.2919307349143	NA	3	NA	TRUE	NA	NA	NA	A	coding	515	1548	171	1718	20.0	-22	False	AATAAA	-23
PB.11898.4	chr9	-	3350	12	novel_not_in_catalog	QSOX2	novel	4530	12	NA	NA	29	-1155	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	78280.77827488887	NA	3	1	TRUE	NA	NA	NA	B	coding	297	894	1217	2110	20.0	-1	True	AATACA	-19
PB.9214.4	chr5	-	1716	11	full-splice_match	PAIP1	ENST00000436644.6	1734	11	17	1	1	0	multi-exon	FALSE	canonical	1	454	junction_1	78388.54789572263	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	231	1433	20.0	0	True	AATAAA	-36
PB.1538.16	chr10	+	7244	38	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	29	-95	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	118331.62447576012	NA	3	1	TRUE	NA	NA	NA	C	coding	677	2034	3918	5951	30.0	3	True	ATTAAA	-19
PB.1538.17	chr10	+	7138	37	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	29	-92	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	91704.48800372146	NA	3	1	TRUE	NA	NA	NA	C	coding	1287	3864	1979	5842	30.0	3	True	ATTAAA	-22
PB.1538.14	chr10	+	2939	20	incomplete-splice_match	BTAF1	ENST00000265990.10	7250	38	24	40944	24	-14	3prime_fragment	FALSE	canonical	1	165024	junction_9	66196.51833154699	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2655	285	2939	65.0	-2	True	ATTAAA	-32
PB.9628.11	chr5	+	1784	11	full-splice_match	SFXN1	ENST00000321442.9	4231	11	158	2289	-11	570	multi-exon	FALSE	canonical	1	522527	junction_7	115766.51700487494	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	97	1065	30.0	-16	True	TATAAA	-20
PB.1538.12	chr10	+	7362	39	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	26	-91	any annotated donor/acceptor	FALSE	canonical	1	41409	junction_25	95458.57472605185	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	1401	3950	30.0	0	True	ATTAAA	-23
PB.1538.13	chr10	+	3063	20	incomplete-splice_match	BTAF1	ENST00000265990.10	7250	38	22	40822	22	108	3prime_fragment	FALSE	canonical	1	165024	junction_9	66196.51833154699	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2775	287	3061	20.0	-4	True	ATTAAA	-15
PB.1538.10	chr10	+	6365	38	novel_in_catalog	BTAF1	novel	7250	38	NA	NA	15	-994	combination_of_known_junctions	FALSE	canonical	1	166231	junction_1	73619.67856657236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1519	4560	1412	5971	30.0	-11	True	AATAGA	-17
PB.1538.11	chr10	+	6469	39	novel_not_in_catalog	BTAF1	novel	7250	38	NA	NA	21	-989	any annotated donor/acceptor	FALSE	canonical	1	41409	junction_25	95458.57472605185	NA	1	NA	TRUE	NA	NA	NA	C	coding	849	2550	1406	3955	30.0	-5	True	AATAGA	-22
PB.1538.18	chr10	+	2796	14	incomplete-splice_match	BTAF1	ENST00000265990.10	7250	38	29	62701	29	-14791	3prime_fragment	FALSE	canonical	1	165024	junction_9	64554.27906267543	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	280	1974	20.0	3	True	AATAAA	-15
PB.1538.19	chr10	+	7896	38	full-splice_match	BTAF1	ENST00000265990.10	7250	38	29	-675	29	675	multi-exon	FALSE	canonical	1	165024	junction_9	76523.61398222072	NA	0	NA	TRUE	NA	NA	NA	C	coding	1849	5550	280	5829	20.0	3	True	ATTAAA	-21
PB.10386.1	chr7	-	1751	15	full-splice_match	CCZ1B	ENST00000316731.12	2885	15	554	580	0	0	multi-exon	FALSE	canonical	1	1921	junction_14	173392.24352305723	NA	2	1	TRUE	NA	NA	NA	A	coding	482	1449	20	1468	20.0	1026	False	AATAAA	-16
PB.11226.15	chr8	-	4150	14	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-32	-2	any annotated donor/acceptor	FALSE	canonical	1	7769	junction_11	183770.947606882	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	669	2054	15.0	-35	True	NA	NA
PB.11898.2	chr9	-	4186	12	novel_not_in_catalog	QSOX2	novel	4530	12	NA	NA	342	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	78280.77827488887	NA	6	1	TRUE	NA	NA	NA	B	coding	297	894	904	1797	35.0	312	False	AATAAA	-16
PB.11926.1	chr9	+	4049	2	full-splice_match	TOR4A	ENST00000357503.2	4148	2	98	1	98	-1	multi-exon	TRUE	canonical	1	75962	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	423	1272	99	1370	15.0	-17	False	NA	NA
PB.8535.1	chr3	-	1336	7	full-splice_match	MRPL47	ENST00000476781.5	1370	7	8	26	3	-26	multi-exon	FALSE	canonical	1	629057	junction_6	188153.71148965767	NA	1	1	TRUE	NA	NA	NA	A	coding	250	753	23	775	40.0	7	False	AATAAA	-14
PB.472.5	chr1	-	4025	12	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	3446	junction_11	66328.24900597292	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	315	1898	30.0	-1	True	AATAAA	-25
PB.472.4	chr1	-	4066	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	1	2	1	-2	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	314	1939	30.0	0	True	AATAAA	-25
PB.472.7	chr1	-	3966	12	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	30030	junction_1	60110.81817363771	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	315	1769	30.0	-1	True	AATAAA	-25
PB.472.6	chr1	-	4025	13	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	13813	junction_1	61360.05602566073	NA	2	NA	TRUE	NA	NA	NA	C	coding	503	1512	317	1828	30.0	-3	True	AATAAA	-25
PB.472.1	chr1	-	5680	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	-6	-1605	-6	1605	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	321	1946	25.0	-7	True	NA	NA
PB.472.3	chr1	-	4186	14	novel_not_in_catalog	ANKRD13C	novel	4069	13	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	1	16851	junction_6	68113.78470770143	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	317	1375	30.0	-3	True	AATAAA	-25
PB.472.2	chr1	-	4600	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	7	-538	7	538	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	308	1933	35.0	6	True	AATAAA	-25
PB.8662.4	chr4	+	4115	9	full-splice_match	NSD2	ENST00000514045.5	3964	9	-70	-81	-33	81	multi-exon	FALSE	canonical	1	155384	junction_1	159977.68093471663	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	182	2071	40.0	-2	True	AATAAA	-18
PB.9214.6	chr5	-	1539	12	novel_not_in_catalog	PAIP1	novel	2782	11	NA	NA	203	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63282.5824950252	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	154	1257	15.0	-1	True	AATAAA	-35
PB.472.9	chr1	-	3996	12	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	-1	-7	no_combination_of_known_junctions	FALSE	canonical	1	6503	junction_7	65845.2186985095	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	1056	1874	40.0	-2	True	AATAAA	-20
PB.472.8	chr1	-	4082	14	novel_not_in_catalog	ANKRD13C	novel	4069	13	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	canonical	1	113	junction_7	78035.86480048622	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	1142	1960	40.0	-2	True	AATAAA	-20
PB.11932.20	chr9	+	3895	24	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	94	-25	no_combination_of_known_junctions	FALSE	canonical	1	13521	junction_1	93892.05014701228	NA	0	NA	TRUE	NA	NA	NA	C	coding	1006	3021	112	3132	80.0	-4314	False	AATAAA	-42
PB.1535.1	chr10	+	4833	21	full-splice_match	HECTD2	ENST00000298068.9	4802	21	-35	4	25	-4	multi-exon	TRUE	canonical	1	24254	junction_1	20274.7373544024	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	130	2460	20.0	1	True	ATTAAA	-12
PB.1535.2	chr10	+	2143	5	full-splice_match	HECTD2	ENST00000371681.8	2175	5	31	1	30	-1	multi-exon	FALSE	canonical	1	24254	junction_1	35000.541174387574	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	65	688	10.0	31	True	NA	NA
PB.11932.27	chr9	+	2918	4	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	92	-2	combination_of_known_junctions	FALSE	canonical	1	3101	junction_3	171395.587571235	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	135	515	15.0	-4316	False	NA	NA
PB.5667.1	chr19	+	1883	19	full-splice_match	STXBP2	ENST00000221283.9	1876	19	-8	1	-2	0	multi-exon	TRUE	canonical	1	272539	junction_1	165625.3810432421	NA	0	NA	TRUE	NA	NA	NA	A	coding	593	1782	40	1821	20.0	-10	True	AATAAA	-20
PB.10878.13	chr7	+	4684	14	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-15	0	intron_retention	TRUE	canonical	1	3571	junction_3	566779.3554572681	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	2553	3572	45.0	-63	True	AATAAA	-17
PB.1694.5	chr10	-	4539	5	full-splice_match	IKZF5	ENST00000368886.9	4555	5	14	2	4	0	multi-exon	FALSE	canonical	1	86562	junction_4	42786.06388182956	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	308	1567	5.0	-9	True	AATAAA	-20
PB.1694.4	chr10	-	4666	6	novel_not_in_catalog	IKZF5	novel	4555	5	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	9604	junction_3	70762.44605269098	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	435	1694	5.0	-28	False	AATAAA	-20
PB.1694.6	chr10	-	4382	4	novel_in_catalog	IKZF5	novel	4555	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	10994	junction_3	75915.67748934779	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	151	1410	5.0	-3	True	AATAAA	-20
PB.1694.1	chr10	-	4546	5	novel_in_catalog	IKZF5	novel	4555	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	12096	junction_3	66257.14468030976	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	313	1572	5.0	-27	False	AATAAA	-22
PB.10878.10	chr7	+	2480	11	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	13803	junction_2	474558.62498967396	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	600	1619	10.0	-50	True	ATTAAA	-34
PB.12175.1	chrX	-	2718	1	full-splice_match	NAP1L3	ENST00000373079.3	2639	1	-84	5	-84	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	506	1521	349	1869	30.0	8	True	AATAAA	-26
PB.9214.9	chr5	-	1626	11	full-splice_match	PAIP1	ENST00000436644.6	1734	11	6	102	6	-49	multi-exon	FALSE	canonical	1	454	junction_1	78388.54789572263	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	242	1444	50.0	-11	True	AATAAA	-19
PB.11932.24	chr9	+	2041	13	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-41	1	no_combination_of_known_junctions	FALSE	canonical	1	12613	junction_12	123482.60172928547	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	247	1797	25.0	-4449	False	AATAAA	-18
PB.1694.9	chr10	-	3420	5	full-splice_match	IKZF5	ENST00000368886.9	4555	5	22	1113	12	-1111	multi-exon	FALSE	canonical	1	86562	junction_4	42786.06388182956	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	300	1559	65.0	-1	True	GATAAA	-12
PB.1694.8	chr10	-	4998	5	novel_not_in_catalog	IKZF5	novel	4555	5	NA	NA	12	-4	any annotated donor/acceptor	FALSE	canonical	1	4124	junction_2	67401.51101792896	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	975	2030	15.0	-1	True	AATAAA	-16
PB.2700.10	chr12	+	2895	20	incomplete-splice_match	MARS	ENST00000262027.9	2905	21	111	-4	0	-2	intron_retention	FALSE	canonical	1	865817	junction_2	244549.2347131147	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2562	24	2585	20.0	-3	True	AATAAA	-23
PB.2700.11	chr12	+	2731	21	novel_in_catalog	MARS	novel	3592	23	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	858	junction_17	396678.07285611343	NA	72	10	TRUE	NA	NA	NA	C	coding	759	2280	24	2303	20.0	-3	True	AATAAA	-23
PB.12133.14	chrX	+	2710	14	novel_not_in_catalog	NONO	novel	2882	10	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	752356.7272139557	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	883	1620	10.0	10	True	ATTAAA	-19
PB.12133.15	chrX	+	2644	12	novel_not_in_catalog	NONO	novel	2882	10	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	689299.0421670146	NA	89	5	TRUE	NA	NA	NA	C	coding	432	1299	138	1436	10.0	16	True	ATTAAA	-19
PB.12133.12	chrX	+	1866	13	full-splice_match	NONO	ENST00000373856.7	1921	13	53	2	-9	-2	multi-exon	FALSE	canonical	1	111266	junction_3	729793.5789626245	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	260	1675	25.0	8	True	ATTAAA	-19
PB.12133.13	chrX	+	2592	11	full-splice_match	NONO	ENST00000373841.5	2606	11	12	2	-7	0	multi-exon	FALSE	canonical	1	242163	junction_10	714695.1208344717	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	87	1502	10.0	10	True	ATTAAA	-19
PB.12133.10	chrX	+	2290	11	novel_in_catalog	NONO	novel	2882	10	NA	NA	3	-1	intron_retention	FALSE	canonical	1	242163	junction_10	532786.6515197242	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	153	1325	25.0	1	True	ATTAAA	-20
PB.12133.11	chrX	+	1759	12	full-splice_match	NONO	ENST00000276079.12	2713	12	53	901	3	-2	multi-exon	FALSE	canonical	1	242163	junction_11	655870.659758298	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	153	1568	25.0	1	True	ATTAAA	-19
PB.8210.3	chr3	+	4226	6	incomplete-splice_match	ATXN7	ENST00000484332.1	2741	9	15172	-2207	25	0	5prime_fragment	FALSE	canonical	1	106337	junction_2	32454.380577049993	NA	3	NA	TRUE	NA	NA	NA	B	coding	343	1032	659	1690	75.0	1476	False	AATAGA	-36
PB.9214.8	chr5	-	1767	11	novel_not_in_catalog	PAIP1	novel	2782	11	NA	NA	204	-49	any annotated donor/acceptor	FALSE	canonical	1	454	junction_1	63902.31369175924	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	482	1585	50.0	0	True	AATAAA	-19
PB.7381.38	chr20	+	2859	9	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	0	1231	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	293234.20891882654	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	468	1433	35.0	0	True	ATTAAA	-27
PB.11095.2	chr8	-	3612	10	full-splice_match	NSD3	ENST00000316985.7	3995	10	1	382	1	56	multi-exon	FALSE	canonical	1	104742	junction_1	95674.71504936808	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	551	2455	5.0	-9	True	TTTAAA	-18
PB.2182.20	chr11	-	2036	16	full-splice_match	PAK1	ENST00000278568.8	2543	16	479	28	-86	-28	multi-exon	FALSE	canonical	1	53110	junction_2	264612.2811482994	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	52	1713	30.0	2	True	AATAAA	-23
PB.7855.28	chr22	+	1401	6	incomplete-splice_match	NUP50	ENST00000347635.8	5233	8	152	6646	-4	-2146	3prime_fragment	FALSE	canonical	1	24337	junction_1	50140.328674630764	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1002	399	1400	35.0	54	False	AGTAAA	-30
PB.2645.4	chr12	-	1880	5	novel_not_in_catalog	SMUG1	novel	484	5	NA	NA	5	-1	intron_retention	FALSE	canonical	1	211	junction_4	142671.54012692056	NA	1	1	TRUE	NA	NA	NA	C	coding	270	813	430	1242	35.0	21	False	NA	NA
PB.2645.2	chr12	-	2673	4	full-splice_match	SMUG1	ENST00000337581.7	1571	4	5	-1107	3	-3	multi-exon	FALSE	canonical	1	8835	junction_3	146763.8135872282	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	126	938	40.0	4	True	NA	NA
PB.2645.3	chr12	-	1581	4	full-splice_match	SMUG1	ENST00000337581.7	1571	4	0	-10	0	-1	multi-exon	FALSE	canonical	1	8835	junction_3	146763.8135872282	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	131	943	35.0	-1	True	NA	NA
PB.9008.10	chr4	+	2865	11	incomplete-splice_match	ABCE1	ENST00000507193.5	2146	19	-21	5856	2	-1588	intron_retention	FALSE	canonical	1	66540	junction_9	181538.07781809854	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	158	1321	40.0	-24	True	NA	NA
PB.2645.1	chr12	-	3225	4	full-splice_match	SMUG1	ENST00000507904.5	465	4	16	-2776	0	549	multi-exon	FALSE	canonical	0	0	junction_2	163635.11482767586	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	126	938	15.0	-1	True	NA	NA
PB.12135.10	chrX	+	8467	20	novel_in_catalog	OGT	novel	5461	22	NA	NA	-8	-56	intron_retention	FALSE	canonical	1	186997	junction_5	344976.8221245966	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	4423	6420	30.0	-8	True	AGTAAA	-21
PB.12135.11	chrX	+	3376	22	full-splice_match	OGT	ENST00000373719.7	5461	22	12	2073	-9	8	multi-exon	FALSE	canonical	1	275340	junction_4	322124.1795623632	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3141	206	3346	20.0	-8892	False	AATAAA	-26
PB.12135.12	chrX	+	5358	22	full-splice_match	OGT	ENST00000373701.7	3310	22	-18	-2030	1	-51	multi-exon	FALSE	canonical	1	110034	junction_1	386962.3928097036	NA	3	NA	TRUE	NA	NA	NA	C	coding	1036	3111	196	3306	20.0	1	True	AGTAAA	-26
PB.12135.13	chrX	+	3828	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	-3	-304	no_combination_of_known_junctions	FALSE	canonical	1	12317	junction_3	358169.3441044194	NA	1	NA	TRUE	NA	NA	NA	C	coding	1023	3072	200	3271	20.0	-3	True	TATAAA	-13
PB.12135.14	chrX	+	5379	22	full-splice_match	OGT	ENST00000373719.7	5461	22	26	56	5	-56	multi-exon	FALSE	canonical	1	275340	junction_4	322124.1795623632	NA	23	NA	TRUE	NA	NA	NA	C	coding	1046	3141	192	3332	30.0	5	True	AGTAAA	-21
PB.12135.15	chrX	+	5366	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	-3	-8	no_combination_of_known_junctions	FALSE	canonical	1	12317	junction_3	358169.3441044194	NA	1	NA	TRUE	NA	NA	NA	C	coding	1023	3072	200	3271	25.0	-3	True	AATAAA	-16
PB.12135.16	chrX	+	6441	20	novel_in_catalog	OGT	novel	5461	22	NA	NA	0	7	intron_retention	FALSE	canonical	1	186997	junction_5	344976.8221245966	NA	3	NA	TRUE	NA	NA	NA	C	coding	665	1998	4415	6412	20.0	0	True	AATAAA	-25
PB.12135.17	chrX	+	5247	20	novel_in_catalog	OGT	novel	5461	22	NA	NA	0	-7	no_combination_of_known_junctions	FALSE	canonical	1	4394	junction_3	367596.90470410493	NA	2	NA	TRUE	NA	NA	NA	C	coding	984	2955	197	3151	25.0	0	True	AATAAA	-17
PB.12135.18	chrX	+	5230	23	novel_not_in_catalog	OGT	novel	5461	22	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	2530	junction_1	444272.55832652067	NA	3	1	TRUE	NA	NA	NA	C	coding	1036	3111	25	3135	25.0	0	True	AATAAA	-16
PB.12135.19	chrX	+	7465	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	0	-4	intron_retention	FALSE	canonical	1	775434	junction_3	261028.86251923846	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	3846	6608	20.0	0	True	AATATA	-16
PB.6988.6	chr2	-	3741	4	incomplete-splice_match	BARD1	ENST00000260947.8	5499	11	6	52616	6	2635	3prime_fragment	FALSE	canonical	1	88289	junction_3	24148.705753219063	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	130	1461	40.0	-16	True	AATAAA	-13
PB.11923.3	chr9	+	2463	1	genic	NDOR1	novel	NA	NA	NA	NA	-4	-4678	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	32	99	346	444	95.0	-22	True	NA	NA
PB.3712.30	chr14	-	3087	9	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	814697.9588201308	NA	5	2	TRUE	NA	NA	NA	B	coding	421	1266	413	1678	15.0	-6808	False	AATAAA	-20
PB.3712.31	chr14	-	2852	7	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-92036	-2	any annotated donor/acceptor	FALSE	canonical	1	97	junction_5	763748.7327529949	NA	1	NA	TRUE	NA	NA	NA	B	coding	413	1242	202	1443	15.0	2951	False	AATAAA	-20
PB.3712.32	chr14	-	2463	6	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	861344.2931167537	NA	13	NA	TRUE	NA	NA	NA	B	coding	346	1041	14	1054	15.0	-6808	False	AATAAA	-20
PB.3712.33	chr14	-	2315	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	849708.1352519505	NA	3	1	TRUE	NA	NA	NA	B	coding	350	1053	391	1443	15.0	-6808	False	AATAAA	-20
PB.3712.34	chr14	-	1940	7	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240993	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	598950.3851039936	NA	3	1	TRUE	NA	NA	NA	B	coding	483	1452	399	1850	15.0	-6816	False	AATAAA	-20
PB.3712.35	chr14	-	2551	8	novel_not_in_catalog	IGHM	novel	1686	6	NA	NA	-49293	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_7	5782120.42508428	NA	0	NA	TRUE	NA	NA	NA	B	coding	396	1191	1103	2293	20.0	9112	False	AATAAA	-20
PB.3712.36	chr14	-	2129	7	novel_not_in_catalog	IGHM	novel	1686	6	NA	NA	-5543	-4	any annotated donor/acceptor	FALSE	canonical	1	182421	junction_6	5641780.807222771	NA	0	NA	TRUE	NA	NA	NA	B	coding	396	1191	682	1872	20.0	-1	True	AATAAA	-19
PB.3712.37	chr14	-	2171	9	novel_not_in_catalog	IGHM	novel	1686	6	NA	NA	-479394	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	5783758.633497316	NA	7	1	TRUE	NA	NA	NA	B	coding	396	1191	723	1913	20.0	NA	False	AATAAA	-20
PB.3712.38	chr14	-	2529	6	novel_not_in_catalog	IGHM	novel	1686	6	NA	NA	-49473	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	6343844.214553651	NA	0	NA	TRUE	NA	NA	NA	B	coding	375	1128	1283	2410	35.0	8932	False	AATAAA	-12
PB.3712.39	chr14	-	1923	5	novel_not_in_catalog	IGHM	novel	1686	6	NA	NA	-5538	-4	any annotated donor/acceptor	FALSE	canonical	1	182421	junction_4	5752647.433694741	NA	0	NA	TRUE	NA	NA	NA	B	coding	375	1128	677	1804	35.0	4	True	AATAAA	-12
PB.8626.2	chr3	+	3008	7	novel_in_catalog	PIGX	novel	744	6	NA	NA	-16	-7	combination_of_known_junctions	FALSE	canonical	1	31144	junction_3	89483.50021605473	NA	0	NA	TRUE	NA	NA	NA	C	coding	79	240	140	379	50.0	106	False	AATAAA	-11
PB.7982.9	chr3	-	2036	11	novel_in_catalog	NGLY1	novel	2288	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	76211	junction_3	101245.50729395355	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	48	1847	30.0	5	True	AATAAA	-19
PB.7982.8	chr3	-	1981	11	novel_in_catalog	NGLY1	novel	2288	3	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	1	17096	junction_4	142101.50863083755	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	54	1676	35.0	-1	True	AATAAA	-25
PB.1118.4	chr1	+	5493	15	full-splice_match	RPS6KC1	ENST00000366960.7	5490	15	-3	0	-3	0	multi-exon	FALSE	canonical	1	90562	junction_8	41150.8581766343	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	154	3354	15.0	-6	True	CATAAA	-14
PB.841.27	chr1	+	2796	8	incomplete-splice_match	IFI16	ENST00000493884.5	4138	10	3	8649	3	-8622	3prime_fragment	FALSE	canonical	1	809651	junction_7	125187.7146104511	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	262	1803	40.0	-6	True	AATAAA	-25
PB.4027.2	chr15	-	3332	6	novel_in_catalog	AC027808.1	novel	683	4	NA	NA	-40992	-51139	no_combination_of_known_junctions	FALSE	canonical	1	6851	junction_3	399339.7038514452	NA	1	NA	TRUE	NA	NA	NA	B	coding	234	705	69	773	55.0	-45	False	AATAAA	-17
PB.4027.3	chr15	-	3109	5	novel_in_catalog	AC027808.1	novel	683	4	NA	NA	-40967	-51139	no_combination_of_known_junctions	FALSE	canonical	1	4269	junction_2	408329.1674558499	NA	0	NA	TRUE	NA	NA	NA	B	coding	234	705	44	748	55.0	-20	True	AATAAA	-17
PB.4027.1	chr15	-	2335	4	novel_in_catalog	AC027808.1	novel	683	4	NA	NA	-40939	-51138	no_combination_of_known_junctions	FALSE	canonical	1	3746	junction_3	9452.22386531339	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	8	True	AATAAA	-18
PB.1768.1	chr11	+	2081	1	antisense	novelGene_ZNF195_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	108	327	1587	1913	95.0	NA	False	NA	NA
PB.4027.7	chr15	-	3797	4	novel_not_in_catalog	MESD	novel	3978	5	NA	NA	4	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	393971.0949949953	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	25	729	40.0	-1	True	AATAAA	-25
PB.4027.4	chr15	-	2148	3	full-splice_match	MESD	ENST00000422879.3	1392	3	1	-757	1	0	multi-exon	FALSE	canonical	1	5315	junction_2	10741.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	28	444	55.0	-4	True	AATAAA	-17
PB.4027.5	chr15	-	4380	3	full-splice_match	MESD	ENST00000261758.5	4264	3	42	-158	-8	158	multi-exon	FALSE	canonical	1	744008	junction_2	80127.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	46	750	50.0	-22	True	ATTAAA	-26
PB.4027.8	chr15	-	1717	3	full-splice_match	MESD	ENST00000261758.5	4264	3	53	2494	3	-2494	multi-exon	FALSE	canonical	1	744008	junction_2	80127.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	35	739	40.0	-11	True	ACTAAA	-20
PB.4027.9	chr15	-	1619	3	full-splice_match	MESD	ENST00000261758.5	4264	3	44	2601	-6	-2601	multi-exon	FALSE	canonical	1	744008	junction_2	80127.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	44	748	10.0	-20	True	NA	NA
PB.7911.11	chr3	-	2601	4	full-splice_match	OXTR	ENST00000316793.7	4364	4	126	1637	122	-1637	multi-exon	FALSE	canonical	1	62909	junction_2	28391.733425222363	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	500	1669	65.0	121	False	NA	NA
PB.10341.5	chr6	-	3001	1	novel_in_catalog	PHF10	novel	1589	12	NA	NA	9264	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2067	False	AATAAA	-17
PB.3123.1	chr13	-	4878	4	novel_not_in_catalog	TPTE2P5	novel	450	5	NA	NA	1	-16076	any annotated donor/acceptor	FALSE	canonical	1	3514	junction_2	3877.4742924858815	NA	10	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	16	False	AGTAAA	-15
PB.3164.1	chr13	-	3461	11	full-splice_match	CAB39L	ENST00000409308.5	2416	11	106	-1151	33	3	multi-exon	TRUE	canonical	1	52918	junction_10	62551.49430900912	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	290	1294	10.0	43	True	AATAAA	-16
PB.3164.2	chr13	-	2429	11	full-splice_match	CAB39L	ENST00000409308.5	2416	11	-14	1	-14	-1	multi-exon	FALSE	canonical	1	52918	junction_10	62551.49430900912	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	410	1414	45.0	-29	True	AATAAA	-20
PB.841.29	chr1	+	1793	9	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	-3	-5779	any annotated donor/acceptor	FALSE	canonical	1	616	junction_8	350501.4751558651	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	259	1782	80.0	-3	True	AAAACA	-30
PB.8482.8	chr3	-	2594	4	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	7	-64288	intron_retention	FALSE	canonical	1	2240	junction_3	125602.54994846067	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	1362	1715	20.0	20	False	AATAAA	-20
PB.11500.7	chr9	-	3570	6	full-splice_match	B4GALT1	ENST00000379731.4	4201	6	-38	669	-38	-669	multi-exon	FALSE	canonical	1	481996	junction_5	211766.26480400507	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	226	1422	40.0	-1	True	NA	NA
PB.11711.1	chr9	-	6715	26	full-splice_match	PTPN3	ENST00000374541.3	6703	26	-7	-5	0	-1	multi-exon	FALSE	canonical	1	34828	junction_25	34194.243399636725	NA	2	NA	TRUE	NA	NA	NA	C	coding	913	2742	113	2854	15.0	-7	True	TATAAA	-24
PB.6900.14	chr2	+	2458	12	full-splice_match	PMS1	ENST00000447232.6	2576	12	-44	162	-1	31	multi-exon	FALSE	canonical	1	6285	junction_9	68290.60777344214	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	115	2427	35.0	-12	True	ATTAAA	-27
PB.6900.15	chr2	+	2962	12	novel_in_catalog	PMS1	novel	2506	10	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	3474	junction_10	69406.38707110797	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	104	2461	35.0	-1	True	AATAAA	-16
PB.6900.12	chr2	+	2248	10	incomplete-splice_match	PMS1	ENST00000441310.6	3225	13	115	13613	-5	-98	3prime_fragment	FALSE	canonical	1	115835	junction_1	37757.55094786004	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2130	119	2248	65.0	-16	True	AATAAA	-5
PB.6900.13	chr2	+	2839	11	novel_in_catalog	PMS1	novel	2506	10	NA	NA	-4	-1	no_combination_of_known_junctions	FALSE	canonical	1	1273	junction_3	75902.3538791782	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	118	2649	30.0	-15	True	AATAAA	-15
PB.6900.10	chr2	+	1762	9	incomplete-splice_match	PMS1	ENST00000447232.6	2576	12	-54	22719	1	2148	3prime_fragment	FALSE	canonical	1	115835	junction_1	35056.26368759761	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1638	125	1762	65.0	-22	True	AATGAA	-20
PB.6900.11	chr2	+	2938	12	novel_in_catalog	PMS1	novel	2506	10	NA	NA	6	10	combination_of_known_junctions	FALSE	canonical	1	6503	junction_2	67252.3986433886	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	120	2735	50.0	-17	True	AATAAA	-28
PB.7022.2	chr2	-	2731	19	full-splice_match	ABCB6	ENST00000265316.8	3045	19	308	6	-233	0	multi-exon	FALSE	canonical	1	166365	junction_18	88278.52758014905	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	37	2565	15.0	266	False	AATAAA	-14
PB.7022.3	chr2	-	3401	17	novel_in_catalog	ABCB6	novel	3045	19	NA	NA	36	0	intron_retention	FALSE	canonical	1	166365	junction_16	75469.64715853901	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	1690	2805	15.0	-1	True	AATAAA	-14
PB.7022.1	chr2	-	2758	18	full-splice_match	ABCB6	ENST00000295750.5	2878	18	122	-2	122	2	multi-exon	TRUE	canonical	1	10696	junction_17	106588.87142600073	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	200	2590	15.0	-29	True	AATAAA	-16
PB.7022.4	chr2	-	3193	18	novel_in_catalog	ABCB6	novel	3045	19	NA	NA	9	0	intron_retention	FALSE	canonical	1	166365	junction_17	84738.84648514645	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	1717	3027	15.0	-10	False	AATAAA	-14
PB.7022.5	chr2	-	3224	18	novel_in_catalog	ABCB6	novel	3045	19	NA	NA	27	0	intron_retention	FALSE	canonical	1	166365	junction_17	79184.0054768411	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	295	2628	15.0	8	False	AATAAA	-14
PB.4639.5	chr17	-	2375	1	full-splice_match	GEMIN4	ENST00000576778.1	4729	1	2353	1	2353	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	651	1956	178	2133	15.0	5794	False	CATAAA	-17
PB.6543.7	chr2	+	2060	5	full-splice_match	MPHOSPH10	ENST00000498451.2	2068	5	4	4	2	-4	multi-exon	FALSE	canonical	1	228418	junction_1	122633.01212764856	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	31	1419	25.0	2	True	ATTAAA	-17
PB.4639.1	chr17	-	3710	2	full-splice_match	GEMIN4	ENST00000319004.5	3748	2	30	8	30	-8	multi-exon	FALSE	canonical	1	127658	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	90	3266	20.0	-1	True	AAAAAG	-24
PB.4639.3	chr17	-	3643	3	full-splice_match	GEMIN4	ENST00000573482.5	1015	3	-80	-2548	-4	4	multi-exon	FALSE	canonical	1	8031	junction_2	6457.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	1062	3189	208	3396	15.0	-5	True	CATAAA	-22
PB.4639.2	chr17	-	3508	2	full-splice_match	GEMIN4	ENST00000319004.5	3748	2	35	205	35	4	multi-exon	FALSE	canonical	1	127658	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3177	85	3261	15.0	4	True	CATAAA	-22
PB.9033.4	chr4	+	5926	35	full-splice_match	TMEM131L	ENST00000409959.7	5017	35	-11	-898	-8	898	multi-exon	FALSE	canonical	1	123366	junction_6	103443.61901060522	NA	1	NA	TRUE	NA	NA	NA	C	coding	1610	4833	61	4893	15.0	-22	True	AATAAA	-14
PB.6543.5	chr2	+	3327	10	novel_in_catalog	MPHOSPH10	novel	2484	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	228418	junction_1	96099.99216955043	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	33	1421	30.0	0	True	AATAAA	-17
PB.3505.8	chr14	+	2970	12	novel_in_catalog	FUT8	novel	5166	11	NA	NA	3	-9	combination_of_known_junctions	FALSE	canonical	1	1410	junction_1	130682.68120587757	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	520	2247	50.0	29	True	AATAAA	-5
PB.3505.9	chr14	+	2824	11	novel_in_catalog	FUT8	novel	5166	11	NA	NA	81	-26	combination_of_known_junctions	FALSE	canonical	1	112108	junction_1	82258.61441332451	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	391	2118	70.0	81	False	NA	NA
PB.3505.6	chr14	+	2809	10	full-splice_match	FUT8	ENST00000394586.6	3559	10	741	9	0	-9	multi-exon	FALSE	canonical	1	2368	junction_1	113387.043069412	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	359	2086	50.0	-2	True	AATAAA	-5
PB.3505.7	chr14	+	2906	11	full-splice_match	FUT8	ENST00000360689.9	5166	11	1272	988	1	-9	multi-exon	FALSE	canonical	1	53743	junction_1	95879.74617952429	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	456	2183	50.0	-1	True	AATAAA	-5
PB.3505.4	chr14	+	2519	9	novel_not_in_catalog	FUT8	novel	5166	11	NA	NA	-74144	-45862	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	148069.22160423608	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	406	1407	85.0	-3	True	NA	NA
PB.3505.5	chr14	+	3889	11	full-splice_match	FUT8	ENST00000360689.9	5166	11	1271	6	0	-6	multi-exon	FALSE	canonical	1	53743	junction_1	95879.74617952429	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	457	2184	40.0	-2	True	AATAAA	-10
PB.3505.2	chr14	+	2968	11	novel_not_in_catalog	FUT8	novel	5166	11	NA	NA	-74241	6	any annotated donor/acceptor	FALSE	canonical	1	2209	junction_1	108835.19817820888	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	503	2230	40.0	3	True	AATAAA	-20
PB.5316.12	chr17	-	2677	14	full-splice_match	SLC38A10	ENST00000288439.9	2708	14	-32	63	6	-63	multi-exon	FALSE	canonical	1	218209	junction_8	110508.0345943467	NA	4	1	TRUE	NA	NA	NA	C	coding	766	2298	379	2676	20.0	-1	True	TTTAAA	-17
PB.11778.1	chr9	-	3224	18	novel_in_catalog	STRBP	novel	663	5	NA	NA	-10	2	combination_of_known_junctions	TRUE	canonical	1	113664	junction_17	120591.7740243754	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	316	2334	0.0	-1	True	TTTAAA	-28
PB.3505.1	chr14	+	2992	11	novel_not_in_catalog	FUT8	novel	5166	11	NA	NA	-122884	-26	any annotated donor/acceptor	TRUE	canonical	1	556	junction_1	109261.5390252215	NA	2	NA	TRUE	NA	NA	NA	C	coding	575	1728	559	2286	70.0	-9364	False	NA	NA
PB.6527.8	chr2	+	2085	13	novel_not_in_catalog	ANXA4	novel	905	4	NA	NA	1	-641	any annotated donor/acceptor	FALSE	canonical	1	3518	junction_3	328697.1299916431	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	89	1141	55.0	0	True	ATTAAA	-14
PB.6527.1	chr2	+	2758	15	novel_in_catalog	ANXA4	novel	905	4	NA	NA	-620	3	combination_of_known_junctions	FALSE	canonical	1	9912	junction_3	443947.5231883855	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	1531	2496	35.0	-3	True	AATAAA	-19
PB.10468.2	chr7	-	4407	13	novel_in_catalog	NOD1	novel	4499	14	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	2939	junction_2	22587.06483240032	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2778	523	3300	15.0	7	True	AATAAA	-15
PB.6527.3	chr2	+	1986	13	full-splice_match	ANXA4	ENST00000409920.5	1414	13	105	-677	-23	-642	multi-exon	FALSE	canonical	1	32170	junction_5	325354.84700447536	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	144	1043	55.0	-55	False	ATTAAA	-13
PB.6527.2	chr2	+	2000	13	full-splice_match	ANXA4	ENST00000394295.5	2799	13	158	641	0	-641	multi-exon	FALSE	canonical	1	650196	junction_1	176153.55430860756	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	91	1056	55.0	-2	True	ATTAAA	-14
PB.6527.5	chr2	+	1908	11	novel_in_catalog	ANXA4	novel	905	4	NA	NA	-11	-631	no_combination_of_known_junctions	FALSE	canonical	1	1636	junction_1	348593.91683900624	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	244	954	60.0	-43	False	ATTAAA	-24
PB.9839.1	chr6	-	2031	9	full-splice_match	TRIM31	ENST00000376734.3	2043	9	16	-4	16	4	multi-exon	FALSE	canonical	1	6122	junction_8	13164.774843782934	NA	0	NA	TRUE	NA	NA	NA	A	coding	425	1278	111	1388	30.0	-1	True	AATAAA	-23
PB.8172.14	chr3	-	2001	11	novel_not_in_catalog	GLT8D1	novel	1849	10	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	342	junction_10	192466.3190500873	NA	19	1	TRUE	NA	NA	NA	C	coding	371	1116	533	1648	20.0	17	True	AATAAA	-14
PB.6527.6	chr2	+	1348	13	full-splice_match	ANXA4	ENST00000394295.5	2799	13	128	1323	0	3	multi-exon	FALSE	canonical	1	650196	junction_1	176153.55430860756	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	121	1086	35.0	1	True	AATAAA	-19
PB.10093.2	chr6	+	4163	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	-68	6515	-68	2632	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	1	NA	TRUE	NA	NA	NA	C	coding	1350	4050	112	4161	60.0	-88	False	AAAAAG	-26
PB.11086.2	chr8	+	1658	8	full-splice_match	PLPBP	ENST00000328195.7	2558	8	50	850	-12	837	multi-exon	FALSE	canonical	1	315294	junction_1	93889.57914008369	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	36	845	80.0	-2	True	NA	NA
PB.8735.15	chr4	-	2971	6	novel_not_in_catalog	TLR1	novel	619	4	NA	NA	-162	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	28250.121391597593	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	428	2788	40.0	-1	True	ATTAAA	-15
PB.172.8	chr1	-	3352	5	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-17	-124	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	346794.41511821887	NA	1	1	TRUE	NA	NA	NA	C	coding	126	381	237	617	45.0	-20	True	AATAAA	-14
PB.172.9	chr1	-	2126	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-27	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	311106.32851705217	NA	1	1	TRUE	NA	NA	NA	C	coding	120	363	638	1000	25.0	-30	False	AATAAA	-20
PB.10468.1	chr7	-	4472	14	full-splice_match	NOD1	ENST00000222823.8	4499	14	26	1	-12	-1	multi-exon	FALSE	canonical	1	22118	junction_13	22121.726407104154	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	501	3362	15.0	-27	True	AATAAA	-18
PB.172.4	chr1	-	3583	7	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-2	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	365539.70120300655	NA	1	1	TRUE	NA	NA	NA	C	coding	178	537	197	733	40.0	-7	True	AATAAA	-15
PB.172.5	chr1	-	3347	5	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	4	-71	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	346794.41511821887	NA	18	1	TRUE	NA	NA	NA	C	coding	126	381	179	559	25.0	38	False	AGTAAA	-14
PB.172.6	chr1	-	3453	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-14	-71	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	281631.19215058547	NA	1	1	TRUE	NA	NA	NA	C	coding	143	432	234	665	25.0	-17	True	AGTAAA	-14
PB.10093.6	chr6	+	5272	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	28	5310	1	-1759	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	0	NA	TRUE	NA	NA	NA	C	coding	1752	5256	16	5271	45.0	8	True	AATAAA	-36
PB.172.1	chr1	-	3945	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-16	-9	combination_of_known_junctions	FALSE	canonical	1	93663	junction_4	305741.3341473838	NA	1	1	TRUE	NA	NA	NA	C	coding	114	345	851	1195	40.0	-19	True	AATAAA	-15
PB.172.2	chr1	-	3746	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-9	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	392923.8949630832	NA	1	1	TRUE	NA	NA	NA	C	coding	120	363	623	985	40.0	-12	True	AATAAA	-15
PB.3273.10	chr13	+	2679	11	novel_in_catalog	TMCO3	novel	3050	13	NA	NA	7	-3	no_combination_of_known_junctions	FALSE	canonical	1	2920	junction_8	155742.4760776584	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	305	2005	20.0	-54	True	ATTAAA	-13
PB.6864.7	chr2	+	4997	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	118	2649	-6	-2649	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	3	NA	TRUE	NA	NA	NA	C	coding	658	1977	29	2005	20.0	-11	True	AATAAA	-13
PB.9402.4	chr5	-	3016	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	283	1034	-10	-1034	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	24	446	15.0	-11	True	AATAAA	-16
PB.6864.6	chr2	+	2803	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	116	4845	-8	573	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	1	NA	TRUE	NA	NA	NA	C	coding	658	1977	31	2007	25.0	-13	True	AATGAA	-17
PB.6429.2	chr2	-	4727	23	novel_in_catalog	DHX57	novel	4859	24	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	6173	junction_2	57437.72674200518	NA	1	NA	TRUE	NA	NA	NA	C	coding	1341	4026	139	4164	50.0	-1	True	ATTAAA	-10
PB.6748.1	chr2	+	2851	2	intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	265	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-18
PB.6936.2	chr2	+	1580	7	incomplete-splice_match	SGO2	ENST00000357799.8	4214	9	-15	11969	-15	1671	3prime_fragment	FALSE	canonical	1	66305	junction_1	26291.358050486644	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1467	114	1580	70.0	-65	True	NA	NA
PB.4625.1	chr16	-	2638	15	novel_not_in_catalog	VPS9D1	novel	2791	14	NA	NA	6	1	any annotated donor/acceptor	FALSE	canonical	1	8391	junction_11	50148.934916203274	NA	1	NA	TRUE	NA	NA	NA	A	coding	466	1401	510	1910	5.0	0	True	AATAAA	-17
PB.902.1	chr1	-	8153	9	full-splice_match	ILDR2	ENST00000529071.5	2566	9	72	-5659	72	-5016	multi-exon	FALSE	canonical	1	3292	junction_6	6911.877422234859	NA	19	NA	TRUE	NA	NA	NA	C	coding	620	1863	143	2005	35.0	128	False	AATAAA	-13
PB.11679.10	chr9	-	1766	6	full-splice_match	TRIM14	ENST00000341469.6	4454	6	-22	2710	-8	835	multi-exon	FALSE	canonical	1	177711	junction_1	40592.042326544746	NA	28	1	TRUE	NA	NA	NA	C	coding	442	1329	33	1361	20.0	-1	True	NA	NA
PB.1904.15	chr11	+	4434	24	full-splice_match	TTC17	ENST00000039989.8	4469	24	4	31	4	-25	multi-exon	FALSE	canonical	1	27184	junction_16	108013.90643005082	NA	3	NA	TRUE	NA	NA	NA	C	coding	1141	3426	11	3436	65.0	1	True	NA	NA
PB.1904.14	chr11	+	3446	20	full-splice_match	TTC17	ENST00000299240.10	3648	20	12	190	3	-15	multi-exon	FALSE	canonical	1	185220	junction_19	90962.9877726752	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	12	2882	55.0	0	True	ATTAAA	-4
PB.1904.16	chr11	+	3622	20	novel_not_in_catalog	TTC17	novel	3648	20	NA	NA	239	-15	any annotated donor/acceptor	FALSE	canonical	1	3107	junction_1	121639.20625186802	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	344	3058	55.0	-65	False	ATTAAA	-4
PB.1904.11	chr11	+	3399	20	novel_not_in_catalog	TTC17	novel	3648	20	NA	NA	-1	-15	any annotated donor/acceptor	FALSE	canonical	1	11787	junction_7	121146.56681924025	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	16	2835	55.0	-4	True	ATTAAA	-4
PB.1904.10	chr11	+	3389	20	novel_not_in_catalog	TTC17	novel	3648	20	NA	NA	-4	-34	any annotated donor/acceptor	FALSE	canonical	1	48	junction_1	157005.02653075295	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	352	2844	55.0	-7	True	NA	NA
PB.1904.13	chr11	+	3796	20	full-splice_match	TTC17	ENST00000299240.10	3648	20	12	-160	3	160	multi-exon	FALSE	canonical	1	185220	junction_19	90962.9877726752	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	12	2882	25.0	0	True	AATAAA	-17
PB.1904.12	chr11	+	4631	25	novel_in_catalog	TTC17	novel	3648	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	199596	junction_19	83075.7176207741	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	12	3608	35.0	0	True	AATAAA	-14
PB.1904.18	chr11	+	2977	6	incomplete-splice_match	TTC17	ENST00000039989.8	4469	24	86883	991	-1760	-19	5prime_fragment	FALSE	canonical	1	284800	junction_3	52028.260053167265	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	2346	2939	80.0	-192	False	NA	NA
PB.1541.5	chr10	-	5610	27	novel_not_in_catalog	IDE	novel	4480	15	NA	NA	-17	-564	any annotated donor/acceptor	FALSE	canonical	1	2916	junction_24	97202.43081468706	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	478	3414	15.0	-25	True	AATAAA	-14
PB.1541.6	chr10	-	5503	26	novel_in_catalog	IDE	novel	4480	15	NA	NA	-8	-564	no_combination_of_known_junctions	FALSE	canonical	1	9309	junction_25	85095.39736793289	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	371	3307	15.0	-16	True	AATAAA	-14
PB.1541.7	chr10	-	5305	25	full-splice_match	IDE	ENST00000265986.10	5877	25	8	564	-1	-564	multi-exon	FALSE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	50	3109	15.0	0	True	AATAAA	-14
PB.1541.1	chr10	-	5652	25	full-splice_match	IDE	ENST00000265986.10	5877	25	-13	238	-13	-238	multi-exon	TRUE	canonical	1	120263	junction_24	55877.0014845976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	71	3130	75.0	-21	True	NA	NA
PB.9033.8	chr4	+	3671	27	incomplete-splice_match	TMEM131L	ENST00000409959.7	5017	35	-3	15904	0	-13519	3prime_fragment	FALSE	canonical	1	123366	junction_6	72603.50138605433	NA	0	NA	TRUE	NA	NA	NA	C	coding	1206	3618	53	3670	45.0	-14	True	AAAAAG	-26
PB.1541.8	chr10	-	5181	23	novel_in_catalog	IDE	novel	4480	15	NA	NA	-9	-564	no_combination_of_known_junctions	FALSE	canonical	1	7185	junction_1	71432.15076571984	NA	3	NA	TRUE	NA	NA	NA	C	coding	972	2919	67	2985	15.0	-17	True	AATAAA	-14
PB.1541.9	chr10	-	5138	24	novel_in_catalog	IDE	novel	4480	15	NA	NA	-2	-564	no_combination_of_known_junctions	FALSE	canonical	1	681	junction_5	76768.84244147102	NA	2	NA	TRUE	NA	NA	NA	C	coding	963	2892	51	2942	15.0	-1	True	AATAAA	-14
PB.1167.1	chr1	+	2113	1	antisense	novelGene_ITPKB_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-5315	False	NA	NA
PB.4374.1	chr16	+	1130	2	full-splice_match	AC002310.1	ENST00000457283.3	1445	2	307	8	-52	-8	multi-exon	FALSE	canonical	1	31582	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	1	True	GATAAA	-43
PB.1331.2	chr10	-	3573	10	full-splice_match	PIP4K2A	ENST00000376573.8	3802	10	108	121	108	-121	multi-exon	FALSE	canonical	1	455234	junction_8	135072.0019142968	NA	3	NA	TRUE	NA	NA	NA	A	coding	406	1221	122	1342	20.0	130	False	AATAAA	-20
PB.11093.8	chr8	-	2171	7	full-splice_match	PLPP5	ENST00000531823.5	875	7	-36	-1260	-3	0	multi-exon	FALSE	canonical	1	12279	junction_5	144616.28956963628	NA	2	NA	TRUE	NA	NA	NA	C	coding	132	399	467	865	50.0	3	True	AGTAAA	-11
PB.7588.8	chr22	+	2028	5	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	77	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-28
PB.10986.21	chr8	-	2419	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	-2	-436	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	134	1153	100.0	-22	False	NA	NA
PB.10986.20	chr8	-	2488	11	full-splice_match	CTSB	ENST00000530640.6	1389	11	-6	-1093	0	-436	multi-exon	FALSE	canonical	1	66392	junction_1	1809671.4452320372	NA	8	NA	TRUE	NA	NA	NA	C	coding	339	1020	144	1163	100.0	-32	False	NA	NA
PB.10986.23	chr8	-	3327	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	111	437	0	-437	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	4	NA	TRUE	NA	NA	NA	C	coding	339	1020	144	1163	95.0	-32	False	NA	NA
PB.10986.22	chr8	-	2307	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	-1	-436	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	141	1160	100.0	-29	False	NA	NA
PB.10986.25	chr8	-	2320	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-437	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	2115162.3853821806	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	113	1132	95.0	-1	True	NA	NA
PB.10986.24	chr8	-	3187	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-437	intron_retention	TRUE	non_canonical	0	0	junction_1	1825084.5783487542	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	140	1159	95.0	-28	False	NA	NA
PB.10986.27	chr8	-	2367	12	novel_in_catalog	CTSB	novel	660	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	14814	junction_10	2295953.5104211005	NA	9	2	TRUE	NA	NA	NA	C	coding	339	1020	277	1296	5.0	-3	True	AAAACA	-13
PB.10986.26	chr8	-	3136	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	140	599	0	-599	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	115	1134	40.0	-3	True	NA	NA
PB.108.4	chr1	+	3101	15	full-splice_match	DNAJC16	ENST00000375847.7	6069	15	42	2926	42	746	multi-exon	FALSE	canonical	1	56934	junction_1	27823.14706896811	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	123	2471	35.0	7	True	AATAAA	-11
PB.108.3	chr1	+	5318	15	full-splice_match	DNAJC16	ENST00000375847.7	6069	15	31	720	31	-718	multi-exon	FALSE	canonical	1	56934	junction_1	27823.14706896811	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	134	2482	75.0	-4	True	AATACA	-12
PB.108.2	chr1	+	6039	15	full-splice_match	DNAJC16	ENST00000375847.7	6069	15	28	2	28	0	multi-exon	FALSE	canonical	1	56934	junction_1	27823.14706896811	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2349	137	2485	20.0	-7	True	AATAAA	-18
PB.108.1	chr1	+	2564	14	incomplete-splice_match	DNAJC16	ENST00000375847.7	6069	15	27	3986	27	-314	3prime_fragment	FALSE	canonical	1	56934	junction_1	28842.429257183267	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	138	2090	15.0	-8	True	ATTAAA	-16
PB.8816.6	chr4	-	2067	7	novel_not_in_catalog	COX18	novel	6846	6	NA	NA	-7	-28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58746.456990093364	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	571	1122	70.0	-47	True	NA	NA
PB.4618.2	chr16	+	716	6	full-splice_match	RPL13	ENST00000311528.9	4498	6	24	3758	0	3	multi-exon	FALSE	canonical	1	2698944	junction_1	2138527.0842942907	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	53	688	15.0	-1	True	AATAAA	-28
PB.4618.3	chr16	+	2558	4	novel_in_catalog	RPL13	novel	4498	6	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2698944	junction_1	2187352.7463917555	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	NA	NA
PB.4803.10	chr17	-	3744	19	novel_not_in_catalog	SREBF1	novel	1230	5	NA	NA	-5	-7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_17	256728.6427059792	NA	1	NA	TRUE	NA	NA	NA	C	coding	1003	3012	191	3202	10.0	3137	False	ATTAAA	-15
PB.4618.1	chr16	+	1086	6	full-splice_match	RPL13	ENST00000311528.9	4498	6	24	3388	0	2	multi-exon	FALSE	canonical	1	2698944	junction_1	2138527.0842942907	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	53	688	15.0	-1	True	NA	NA
PB.6425.11	chr2	-	1873	13	full-splice_match	ATL2	ENST00000378954.8	2868	13	-28	1023	-5	-2	multi-exon	FALSE	canonical	1	233787	junction_12	66664.61564485608	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	31	1782	35.0	-19	True	AATAAA	-22
PB.4618.4	chr16	+	2186	6	full-splice_match	RPL13	ENST00000311528.9	4498	6	25	2287	0	-1	multi-exon	FALSE	canonical	1	2698944	junction_1	2138527.0842942907	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	52	687	30.0	0	True	NA	NA
PB.4618.5	chr16	+	910	5	full-splice_match	RPL13	ENST00000393099.3	2385	5	-2	1477	-2	-1	multi-exon	FALSE	canonical	1	2855604	junction_3	2086722.5217707432	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	252	887	15.0	-1683	False	AATAAA	-23
PB.8695.4	chr4	+	4292	18	novel_in_catalog	SH3TC1	novel	543	4	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	7891	junction_9	66164.89576001959	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	456	4157	25.0	-28	True	AATAAA	-14
PB.7749.2	chr22	+	1323	3	full-splice_match	MPST	ENST00000429360.5	1331	3	-2	10	-2	0	multi-exon	FALSE	canonical	1	225745	junction_1	200858.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	72	1025	20.0	24	True	AATAAA	-14
PB.293.2	chr1	-	882	8	full-splice_match	MRPS15	ENST00000373116.5	1006	8	67	57	-25	-1	multi-exon	FALSE	canonical	1	1278856	junction_7	202673.50250446794	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	96	869	20.0	11	True	AATAAA	-13
PB.8191.12	chr3	+	2170	20	full-splice_match	APPL1	ENST00000482800.5	2217	20	-45	92	7	-92	multi-exon	FALSE	canonical	1	166360	junction_1	61963.49159767443	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	141	2078	60.0	-22	True	NA	NA
PB.12303.19	chrX	-	5154	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	-2527	combination_of_known_junctions	FALSE	canonical	1	56236	junction_7	416552.350987318	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	906	1925	25.0	-1	True	NA	NA
PB.8191.13	chr3	+	1966	20	full-splice_match	APPL1	ENST00000482800.5	2217	20	23	228	-19	1	multi-exon	FALSE	canonical	1	166360	junction_1	61963.49159767443	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1893	73	1965	35.0	4	True	AAAACA	-24
PB.7588.7	chr22	+	2095	4	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	-839	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	NA	False	NA	NA
PB.5974.1	chr19	+	2591	3	full-splice_match	KCNK6	ENST00000263372.4	5722	3	10	3121	10	-3121	multi-exon	FALSE	canonical	1	75711	junction_1	15203.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	313	942	98	1039	75.0	0	True	NA	NA
PB.7588.6	chr22	+	2130	7	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	2566	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	B	coding	108	327	676	1002	30.0	NA	False	AATATA	-22
PB.10066.11	chr6	-	3608	6	full-splice_match	TMEM30A	ENST00000475111.6	2791	6	164	-981	164	-5	multi-exon	FALSE	canonical	1	16101	junction_5	426601.45398298866	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	147	1124	25.0	-5	True	AATAAA	-11
PB.5487.7	chr18	+	2627	10	novel_in_catalog	POLI	novel	6133	10	NA	NA	177	-2	combination_of_known_junctions	FALSE	canonical	1	11053	junction_1	40445.467639071874	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	354	2372	40.0	-3633	False	AATAAA	-16
PB.1831.10	chr11	-	4101	21	novel_not_in_catalog	COPB1	novel	510	2	NA	NA	6	-8	intron_retention	FALSE	canonical	1	2757	junction_11	399054.0587829423	NA	3	1	TRUE	NA	NA	NA	C	coding	478	1437	2355	3791	30.0	3	True	AATAAA	-15
PB.2811.8	chr12	-	2591	11	incomplete-splice_match	NR2C1	ENST00000333003.9	4143	14	72	10181	-3	-1	3prime_fragment	FALSE	canonical	1	126132	junction_6	31908.768265321676	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	260	1723	10.0	-17	True	AATAAA	-25
PB.1831.16	chr11	-	3057	22	full-splice_match	COPB1	ENST00000439561.6	3382	22	33	292	0	-292	multi-exon	FALSE	canonical	1	431700	junction_21	336135.9882879914	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2844	214	3057	65.0	-19	True	GATAAA	-16
PB.1831.17	chr11	-	3008	22	novel_in_catalog	COPB1	novel	510	2	NA	NA	-2	-292	combination_of_known_junctions	FALSE	canonical	1	148762	junction_21	370022.6464200606	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2844	165	3008	65.0	-5	True	GATAAA	-16
PB.1831.14	chr11	-	3257	22	full-splice_match	COPB1	ENST00000439561.6	3382	22	38	87	-5	-87	multi-exon	FALSE	canonical	1	431700	junction_21	336135.9882879914	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	209	3070	25.0	-14	True	TTTAAA	-23
PB.1831.15	chr11	-	3218	22	novel_in_catalog	COPB1	novel	510	2	NA	NA	-2	-88	combination_of_known_junctions	FALSE	canonical	1	148762	junction_21	370022.6464200606	NA	1	1	TRUE	NA	NA	NA	C	coding	953	2862	171	3032	25.0	-11	True	TTTAAA	-22
PB.2811.3	chr12	-	2689	12	novel_in_catalog	NR2C1	novel	4143	14	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	30730	junction_3	77201.21241725556	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	250	804	25.0	-7	True	AATAAA	-18
PB.2811.2	chr12	-	2704	12	novel_in_catalog	NR2C1	novel	4143	14	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	38098	junction_4	58643.49564082283	NA	2	1	TRUE	NA	NA	NA	C	coding	184	555	250	804	25.0	-7	True	AATAAA	-18
PB.2811.1	chr12	-	2822	13	novel_in_catalog	NR2C1	novel	4143	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	172083	junction_4	27776.135810359865	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	1394	2488	25.0	-3	True	AATAAA	-18
PB.1831.19	chr11	-	2600	18	incomplete-splice_match	COPB1	ENST00000439561.6	3382	22	29	7388	-4	-4922	3prime_fragment	FALSE	canonical	1	431700	junction_17	297856.91809206153	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2382	218	2599	40.0	-23	True	ATTAAA	-26
PB.2811.7	chr12	-	3006	10	novel_in_catalog	NR2C1	novel	4143	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	172083	junction_1	18979.625033046934	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	1392	2138	10.0	-1	True	AATAAA	-25
PB.2811.6	chr12	-	2530	11	novel_not_in_catalog	NR2C1	novel	4143	14	NA	NA	15	-3	intron_retention	FALSE	canonical	1	270	junction_4	102745.21503213665	NA	37	2	TRUE	NA	NA	NA	C	coding	184	555	229	783	25.0	14	True	AATAAA	-17
PB.2811.5	chr12	-	2782	14	novel_not_in_catalog	NR2C1	novel	4143	14	NA	NA	9	-3	intron_retention	FALSE	canonical	1	206	junction_7	78809.81671732114	NA	5	1	TRUE	NA	NA	NA	C	coding	290	873	1577	2449	25.0	8	True	AATAAA	-17
PB.2811.4	chr12	-	2391	14	full-splice_match	NR2C1	ENST00000333003.9	4143	14	86	1666	-2	-2	multi-exon	FALSE	canonical	1	126132	junction_9	36099.66428895355	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	246	2057	25.0	-3	True	AATAAA	-18
PB.7146.9	chr20	-	1656	8	novel_in_catalog	DDRGK1	novel	865	2	NA	NA	5	-1	intron_retention	FALSE	canonical	1	436191	junction_7	275104.1758305907	NA	1	1	TRUE	NA	NA	NA	C	coding	298	897	54	950	5.0	-1	True	ATTAAA	-19
PB.7146.8	chr20	-	1892	9	novel_not_in_catalog	DDRGK1	novel	865	2	NA	NA	280	-1	any annotated donor/acceptor	FALSE	canonical	1	37930	junction_8	373847.8752687841	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	1434	1760	5.0	0	True	ATTAAA	-19
PB.4346.2	chr16	+	1856	3	full-splice_match	SPN	ENST00000563039.2	1853	3	-10	7	-10	-7	multi-exon	TRUE	canonical	1	17	junction_2	264571.0	NA	2	1	TRUE	NA	NA	NA	C	coding	400	1203	107	1309	60.0	-2	True	NA	NA
PB.4346.3	chr16	+	2463	4	novel_not_in_catalog	SPN	novel	1935	2	NA	NA	-8	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	249447.9448172615	NA	6	NA	TRUE	NA	NA	NA	C	coding	400	1203	105	1307	60.0	0	True	NA	NA
PB.7146.7	chr20	-	2424	8	novel_not_in_catalog	DDRGK1	novel	865	2	NA	NA	274	-1	intron_retention	FALSE	canonical	1	37930	junction_7	382716.28338155115	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	1	339	5.0	5019	False	ATTAAA	-19
PB.4346.1	chr16	+	1951	3	novel_not_in_catalog	SPN	novel	1935	2	NA	NA	-10	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	264579.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	107	1309	60.0	-2	True	NA	NA
PB.4346.6	chr16	+	2190	2	novel_in_catalog	SPN	novel	1935	2	NA	NA	35	-6	intron_retention	FALSE	canonical	1	17	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	C	coding	400	1203	440	1642	60.0	-3618	False	NA	NA
PB.4346.4	chr16	+	1928	3	novel_not_in_catalog	SPN	novel	1935	2	NA	NA	-8	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	264579.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	105	1307	60.0	0	True	NA	NA
PB.4346.5	chr16	+	1902	2	full-splice_match	SPN	ENST00000436527.5	1197	2	28	-733	-8	-1	multi-exon	FALSE	canonical	1	529159	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	105	1307	15.0	0	True	AATAAA	-29
PB.1440.4	chr10	+	3281	15	full-splice_match	DDX21	ENST00000354185.8	4711	15	54	1376	54	-1370	multi-exon	FALSE	canonical	1	809459	junction_5	191394.78513220002	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	45	2396	95.0	12	True	NA	NA
PB.1440.5	chr10	+	3110	14	novel_in_catalog	DDX21	novel	4711	15	NA	NA	47	-1369	no_combination_of_known_junctions	FALSE	canonical	1	1549	junction_3	356221.45930098137	NA	4	1	TRUE	NA	NA	NA	C	coding	479	1440	785	2224	100.0	5	True	NA	NA
PB.1440.6	chr10	+	3254	15	full-splice_match	DDX21	ENST00000620315.1	4829	15	206	1369	206	-1369	multi-exon	FALSE	canonical	1	16070	junction_1	342499.5622769213	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	221	2368	100.0	-26	True	NA	NA
PB.1440.1	chr10	+	2711	15	full-splice_match	DDX21	ENST00000354185.8	4711	15	42	1958	42	-1952	multi-exon	FALSE	canonical	1	809459	junction_5	191394.78513220002	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	57	2408	10.0	0	True	GATAAA	-24
PB.1440.2	chr10	+	4680	15	full-splice_match	DDX21	ENST00000354185.8	4711	15	29	2	29	-2	multi-exon	FALSE	canonical	1	809459	junction_5	191394.78513220002	NA	2	NA	TRUE	NA	NA	NA	C	coding	783	2352	70	2421	15.0	-515	False	AATAAA	-19
PB.1440.3	chr10	+	2488	15	full-splice_match	DDX21	ENST00000354185.8	4711	15	36	2187	36	-2181	multi-exon	FALSE	canonical	1	809459	junction_5	191394.78513220002	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	63	2414	45.0	-6	True	AATATA	-24
PB.6856.2	chr2	+	3574	1	novel_in_catalog	HOXD3	novel	428	2	NA	NA	-8386	-13337	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-4802	False	AATAAA	-18
PB.10909.1	chr7	-	3194	4	full-splice_match	ZNF425	ENST00000378061.6	3220	4	21	5	-19	-5	multi-exon	FALSE	canonical	1	20894	junction_3	3710.9384557308713	NA	2	NA	TRUE	NA	NA	NA	A	coding	752	2259	113	2371	35.0	-20	True	AATAAA	-23
PB.10909.2	chr7	-	2414	1	full-splice_match	RN7SL521P	ENST00000488398.3	297	1	-293	-1824	-293	1824	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	102	309	105	413	90.0	26	False	NA	NA
PB.260.1	chr1	+	3086	6	novel_not_in_catalog	AL033529.1	novel	3447	10	NA	NA	74104	1151	any annotated donor/acceptor	FALSE	canonical	1	1877	junction_1	24512.073199955976	NA	6	NA	TRUE	NA	NA	NA	B	coding	441	1326	237	1562	35.0	-22	True	TATAAA	-14
PB.1833.10	chr11	+	3600	17	novel_not_in_catalog	PDE3B	novel	6076	16	NA	NA	-32	188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41502.36789437253	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	923	3178	10.0	-5	True	AATAGA	-18
PB.1833.11	chr11	+	2261	7	incomplete-splice_match	PDE3B	ENST00000282096.8	6076	16	116	52618	8	220	3prime_fragment	FALSE	canonical	1	80177	junction_1	29175.159363555995	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	238	2073	15.0	-6232	False	NA	NA
PB.6730.1	chr2	+	2170	2	antisense	novelGene_WDR33_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	66	201	309	509	15.0	7	True	AATAAA	-20
PB.6821.13	chr2	-	3303	4	full-splice_match	FASTKD1	ENST00000417376.5	687	4	-2618	2	16	-2	multi-exon	FALSE	canonical	1	15390	junction_3	18379.445119178352	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	1871	2209	40.0	5	True	AGTAAA	-17
PB.8662.1	chr4	+	5174	22	full-splice_match	NSD2	ENST00000508803.5	4251	22	-41	-882	-41	0	multi-exon	FALSE	canonical	1	155384	junction_1	139155.45407055653	NA	0	NA	TRUE	NA	NA	NA	C	coding	1365	4098	190	4287	20.0	-10	True	AATATA	-28
PB.11625.87	chr9	-	1842	17	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	18	56	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	778495.2338276448	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	186	1577	30.0	21	False	NA	NA
PB.6991.18	chr2	-	2180	5	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	23	-26	intron_retention	FALSE	non_canonical	0	0	junction_1	93891.38367383611	NA	18	1	TRUE	NA	NA	NA	C	coding	183	552	264	815	75.0	9	True	NA	NA
PB.6991.19	chr2	-	2153	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	-5	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	292	936	75.0	-19	True	NA	NA
PB.1051.49	chr1	+	5227	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_3	194050.12770909708	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	1070	3502	25.0	59	False	AATAAA	-18
PB.6991.10	chr2	-	2844	5	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	2	-26	intron_retention	FALSE	non_canonical	0	0	junction_1	93891.38367383611	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	285	836	75.0	-12	True	NA	NA
PB.6991.11	chr2	-	2578	6	full-splice_match	MREG	ENST00000620139.4	2618	6	14	26	14	-26	multi-exon	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	3	NA	TRUE	NA	NA	NA	C	coding	214	645	273	917	75.0	0	True	NA	NA
PB.6991.12	chr2	-	2593	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	33	-26	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	95898.4159214322	NA	10	1	TRUE	NA	NA	NA	C	coding	214	645	254	898	75.0	19	False	NA	NA
PB.6991.13	chr2	-	2498	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	42	-26	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	95898.4159214322	NA	30	1	TRUE	NA	NA	NA	C	coding	214	645	245	889	75.0	28	False	NA	NA
PB.6991.15	chr2	-	2321	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	-4	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	291	935	75.0	-18	True	NA	NA
PB.6991.16	chr2	-	2327	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	-39	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	336	980	75.0	-63	False	NA	NA
PB.6991.17	chr2	-	2228	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	26	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	3	1	TRUE	NA	NA	NA	C	coding	214	645	261	905	75.0	12	True	NA	NA
PB.10832.1	chr7	+	3049	11	incomplete-splice_match	SMO	ENST00000249373.7	3738	12	14586	4	-2692	-4	5prime_fragment	FALSE	canonical	1	141052	junction_10	35857.810934439374	NA	0	NA	TRUE	NA	NA	NA	A	coding	558	1677	283	1959	15.0	NA	False	AATAAA	-12
PB.12316.18	chrX	+	3881	1	genic	MAGEA12_CSAG4	novel	NA	NA	NA	NA	19	9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	314	945	2365	3309	15.0	-9	False	AATAAA	-13
PB.7353.5	chr20	+	6088	8	incomplete-splice_match	PTPN1	ENST00000371621.4	4008	10	8	481	8	0	intron_retention	FALSE	canonical	1	532368	junction_6	63018.33038092964	NA	3	NA	TRUE	NA	NA	NA	C	coding	363	1092	167	1258	15.0	-21	True	AATAAA	-21
PB.7353.4	chr20	+	3844	9	novel_in_catalog	PTPN1	novel	3469	9	NA	NA	8	-213	intron_retention	FALSE	canonical	1	448737	junction_8	83540.28585873629	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	1407	2012	85.0	-21	True	AATAAA	-11
PB.7353.7	chr20	+	3283	10	full-splice_match	PTPN1	ENST00000371621.4	4008	10	31	694	31	-213	multi-exon	FALSE	canonical	1	448737	junction_9	82080.60218686279	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	144	1451	85.0	2	True	AATAAA	-11
PB.7353.6	chr20	+	2308	10	full-splice_match	PTPN1	ENST00000371621.4	4008	10	8	1692	8	-1211	multi-exon	FALSE	canonical	1	448737	junction_9	82080.60218686279	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	167	1474	25.0	-21	True	NA	NA
PB.7353.1	chr20	+	3548	9	incomplete-splice_match	PTPN1	ENST00000371621.4	4008	10	0	1691	0	-1210	intron_retention	FALSE	canonical	1	532368	junction_6	66772.13064220731	NA	4	NA	TRUE	NA	NA	NA	C	coding	432	1299	175	1473	25.0	-29	True	NA	NA
PB.7353.3	chr20	+	4750	9	incomplete-splice_match	PTPN1	ENST00000371621.4	4008	10	8	481	8	0	intron_retention	FALSE	canonical	1	532368	junction_6	66772.13064220731	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	167	1465	15.0	-21	True	AATAAA	-21
PB.7353.2	chr20	+	2181	10	full-splice_match	PTPN1	ENST00000371621.4	4008	10	7	1820	7	-1339	multi-exon	FALSE	canonical	1	448737	junction_9	82080.60218686279	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	168	1475	10.0	-22	True	AATATA	-43
PB.10017.9	chr6	-	4136	5	incomplete-splice_match	NFKBIE	ENST00000619360.5	2581	6	235	529	40	-2	intron_retention	FALSE	canonical	1	234886	junction_4	84404.67278348694	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	3265	3612	35.0	-6	True	ACTAAA	-14
PB.7353.9	chr20	+	3338	10	full-splice_match	PTPN1	ENST00000371621.4	4008	10	178	492	178	-11	multi-exon	FALSE	canonical	1	448737	junction_9	82080.60218686279	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	3	1304	40.0	-3437	False	AATAAA	-10
PB.7353.8	chr20	+	1942	10	full-splice_match	PTPN1	ENST00000371621.4	4008	10	29	2037	29	-1556	multi-exon	FALSE	canonical	1	448737	junction_9	82080.60218686279	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	146	1453	40.0	0	True	ATTAAA	-21
PB.7195.1	chr20	+	1987	1	full-splice_match	AL035563.1	ENST00000609087.1	1539	1	-451	3	-451	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	111	336	2	337	10.0	0	True	AATAAA	-22
PB.10266.1	chr6	+	1064	3	full-splice_match	RAB32	ENST00000367495.3	1217	3	140	13	140	-13	multi-exon	FALSE	canonical	1	456427	junction_1	173300.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	225	678	40	717	20.0	0	True	AATAAA	-12
PB.5187.7	chr17	-	4546	7	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_6	478690.50412650645	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	171	995	40.0	-1	True	AATAAA	-45
PB.8524.11	chr3	+	3444	25	novel_not_in_catalog	ECT2	novel	4087	24	NA	NA	-5	7790	any annotated donor/acceptor	FALSE	canonical	1	7562	junction_24	120757.1806133594	NA	2	1	TRUE	NA	NA	NA	C	coding	889	2670	160	2829	30.0	-5	True	NA	NA
PB.10193.1	chr6	+	2380	12	full-splice_match	HSF2	ENST00000452194.5	2643	12	102	161	102	-8	multi-exon	FALSE	canonical	1	65220	junction_10	71216.9686816165	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	86	1642	15.0	-8	True	AATAAA	-17
PB.10193.2	chr6	+	2667	12	full-splice_match	HSF2	ENST00000452194.5	2643	12	82	-106	82	106	multi-exon	TRUE	canonical	1	65220	junction_10	71216.9686816165	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	106	1662	25.0	-28	True	NA	NA
PB.10193.3	chr6	+	2439	13	full-splice_match	HSF2	ENST00000368455.8	2549	13	106	4	101	-4	multi-exon	FALSE	canonical	1	71593	junction_11	68983.80708920633	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	87	1697	10.0	-9	True	AATAAA	-21
PB.11768.2	chr9	+	1342	7	full-splice_match	MRRF	ENST00000344641.7	9826	7	218	8266	-13	-11	multi-exon	FALSE	canonical	1	80395	junction_1	36995.207292071405	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	94	882	50.0	-20	True	AATAAA	-32
PB.6746.1	chr2	+	1482	8	full-splice_match	CCDC74A	ENST00000295171.10	1543	8	59	2	12	0	multi-exon	FALSE	canonical	1	20325	junction_2	49541.13370540007	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	80	1216	10.0	9714	False	AATAAA	-15
PB.3351.9	chr14	-	1819	9	full-splice_match	TINF2	ENST00000559969.6	1796	9	-28	5	-11	-1	multi-exon	FALSE	canonical	1	80316	junction_1	189817.47543260967	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	315	1670	30.0	16	False	ATTAAA	-13
PB.3351.8	chr14	-	1947	4	full-splice_match	TINF2	ENST00000558566.1	1874	4	-38	-35	12	0	multi-exon	FALSE	canonical	1	19740	junction_1	197349.021912955	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	320	742	35.0	11	False	ATTAAA	-14
PB.6746.4	chr2	+	3948	5	novel_in_catalog	CCDC74A	novel	1080	2	NA	NA	1	0	intron_retention	FALSE	canonical	1	86243	junction_1	32317.66302658656	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	723	1622	10.0	9757	False	AATAAA	-15
PB.6746.5	chr2	+	3157	6	novel_in_catalog	CCDC74A	novel	1080	2	NA	NA	6	0	intron_retention	FALSE	canonical	1	86243	junction_1	31200.878158154457	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	718	1617	10.0	9762	False	AATAAA	-15
PB.6746.6	chr2	+	3722	4	novel_in_catalog	CCDC74A	novel	1080	2	NA	NA	406	0	intron_retention	FALSE	canonical	1	140349	junction_3	12064.145786401768	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	497	1396	10.0	NA	False	AATAAA	-15
PB.10017.4	chr6	-	1818	6	full-splice_match	NFKBIE	ENST00000619360.5	2581	6	237	526	42	1	multi-exon	FALSE	canonical	1	171955	junction_5	105807.43578142324	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	206	1291	30.0	-4	True	ACTAAA	-17
PB.3351.2	chr14	-	2985	1	novel_in_catalog	TINF2	novel	2168	6	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	140	423	1795	2217	35.0	-14	True	ATTAAA	-14
PB.3351.1	chr14	-	3785	6	full-splice_match	TINF2	ENST00000399423.8	2168	6	17	-1634	-11	1634	multi-exon	TRUE	canonical	1	359220	junction_5	71914.61668117267	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	315	1379	0.0	16	False	AAAAAG	-26
PB.3351.7	chr14	-	1950	8	novel_in_catalog	TINF2	novel	468	2	NA	NA	-9	0	intron_retention	FALSE	canonical	1	135698	junction_1	170559.2055005522	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	313	1575	35.0	18	False	ATTAAA	-14
PB.3351.6	chr14	-	1980	8	novel_not_in_catalog	TINF2	novel	468	2	NA	NA	-11	0	intron_retention	FALSE	canonical	1	1926	junction_1	202608.5431796689	NA	5	1	TRUE	NA	NA	NA	C	coding	378	1137	315	1451	35.0	16	False	ATTAAA	-14
PB.3351.5	chr14	-	2040	7	novel_in_catalog	TINF2	novel	468	2	NA	NA	-11	0	intron_retention	FALSE	canonical	1	135698	junction_1	148149.22962187673	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	315	1379	35.0	16	False	ATTAAA	-14
PB.3351.4	chr14	-	2133	6	full-splice_match	TINF2	ENST00000399423.8	2168	6	30	5	-1	-1	multi-exon	FALSE	canonical	1	359220	junction_5	71914.61668117267	NA	4	NA	TRUE	NA	NA	NA	C	coding	354	1065	302	1366	30.0	-16	True	ATTAAA	-13
PB.2423.8	chr12	+	2224	8	full-splice_match	COPS7A	ENST00000543155.5	2127	8	377	-474	-1	455	multi-exon	FALSE	canonical	1	205211	junction_1	249507.2494942864	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	106	933	70.0	-12	True	NA	NA
PB.2423.9	chr12	+	1836	8	novel_in_catalog	COPS7A	novel	2127	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	2604	junction_1	313303.1353987602	NA	6	1	TRUE	NA	NA	NA	C	coding	275	828	193	1020	40.0	-12	True	AATAAA	-14
PB.5671.1	chr19	+	1516	5	full-splice_match	SNAPC2	ENST00000221573.10	1542	5	25	1	25	-1	multi-exon	FALSE	canonical	1	117749	junction_1	94269.58968431973	NA	0	NA	TRUE	NA	NA	NA	A	coding	334	1005	27	1031	35.0	0	True	AATAAA	-23
PB.2693.2	chr12	+	2490	7	full-splice_match	NAB2	ENST00000300131.7	2711	7	218	3	18	-2	multi-exon	FALSE	canonical	1	126989	junction_1	120754.56870952016	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	161	1738	15.0	-2	True	AATAAA	-18
PB.2423.1	chr12	+	1845	8	full-splice_match	COPS7A	ENST00000229251.7	1721	8	-58	-66	-1	0	multi-exon	FALSE	canonical	1	95537	junction_1	283622.45656304643	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	184	1011	15.0	-33	True	AATAAA	-32
PB.2423.2	chr12	+	2783	7	novel_in_catalog	COPS7A	novel	2127	8	NA	NA	9	3	intron_retention	FALSE	canonical	1	205211	junction_1	263783.3792405343	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	201	611	35.0	-23	True	AATAAA	-18
PB.2514.4	chr12	-	5382	36	incomplete-splice_match	ITPR2	ENST00000381340.7	11405	57	1	219716	1	-62025	3prime_fragment	FALSE	canonical	1	105772	junction_16	41782.3596169777	NA	0	NA	TRUE	NA	NA	NA	C	coding	1655	4965	417	5381	35.0	-5	True	NA	NA
PB.2514.3	chr12	-	9449	57	full-splice_match	ITPR2	ENST00000381340.7	11405	57	5	1951	5	-1951	multi-exon	FALSE	canonical	1	103063	junction_12	46865.83253368338	NA	1	1	TRUE	NA	NA	NA	C	coding	2701	8106	413	8518	25.0	-1	True	TATAAA	-25
PB.2423.5	chr12	+	1899	9	novel_in_catalog	COPS7A	novel	2127	8	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	1	2537	junction_2	399659.86357806105	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	300	1076	35.0	-25	True	AATAAA	-21
PB.2423.6	chr12	+	1689	7	full-splice_match	COPS7A	ENST00000455113.6	1718	7	68	-39	-4	4	multi-exon	FALSE	canonical	1	68518	junction_2	348749.1602902277	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-23	True	AATAAA	-19
PB.2423.7	chr12	+	1771	8	full-splice_match	COPS7A	ENST00000543155.5	2127	8	370	-14	0	-3	multi-exon	FALSE	canonical	1	205211	junction_1	249507.2494942864	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	113	940	15.0	-19	True	AATAAA	-29
PB.12048.9	chrX	+	2367	15	novel_in_catalog	CDK16	novel	562	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	167524	junction_1	339241.7185513802	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	404	1411	5.0	-3	True	NA	NA
PB.12048.8	chrX	+	2199	17	novel_in_catalog	CDK16	novel	562	3	NA	NA	-2	0	intron_retention	FALSE	canonical	1	18225	junction_1	441356.7564656277	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	487	1977	5.0	-4	True	NA	NA
PB.213.1	chr1	-	805	5	full-splice_match	IFI6	ENST00000361157.10	841	5	27	9	7	-4	multi-exon	FALSE	canonical	1	1775262	junction_3	229614.32139718006	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	102	494	25.0	0	True	AATAAA	-11
PB.213.2	chr1	-	817	5	full-splice_match	IFI6	ENST00000362020.4	828	5	7	4	7	-4	multi-exon	FALSE	canonical	1	293497	junction_3	784524.4764432146	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	102	506	25.0	0	True	AATAAA	-11
PB.12048.3	chrX	+	2249	17	novel_in_catalog	CDK16	novel	562	3	NA	NA	-16	0	intron_retention	FALSE	canonical	1	8223	junction_1	442902.0798037643	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	396	2027	5.0	3	True	NA	NA
PB.12048.2	chrX	+	2182	16	full-splice_match	CDK16	ENST00000457458.6	3158	16	-31	1007	-31	0	multi-exon	FALSE	canonical	1	52739	junction_1	351980.7592157781	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	452	1960	5.0	-12	True	NA	NA
PB.12048.1	chrX	+	3254	16	full-splice_match	CDK16	ENST00000457458.6	3158	16	-100	4	-100	0	multi-exon	FALSE	canonical	1	52739	junction_1	351980.7592157781	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	521	2029	35.0	-9256	False	ATTAAA	-13
PB.11283.4	chr8	-	3007	4	full-splice_match	KLF10	ENST00000395884.3	3659	4	653	-1	653	1	multi-exon	FALSE	canonical	1	24820	junction_3	336743.74389140477	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	251	1660	30.0	20	True	AATAAA	-15
PB.12048.7	chrX	+	2238	17	novel_in_catalog	CDK16	novel	562	3	NA	NA	-3	0	intron_retention	FALSE	canonical	1	18225	junction_1	445591.14711841906	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	526	2016	5.0	-5	True	NA	NA
PB.12048.6	chrX	+	3552	14	novel_in_catalog	CDK16	novel	562	3	NA	NA	-3	0	intron_retention	FALSE	canonical	1	167524	junction_1	349706.19639071194	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	406	1413	35.0	-5	True	ATTAAA	-13
PB.12048.5	chrX	+	2550	14	novel_in_catalog	CDK16	novel	562	3	NA	NA	-4	0	intron_retention	FALSE	canonical	1	167524	junction_1	349706.19639071194	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	407	1414	5.0	-6	True	NA	NA
PB.12048.4	chrX	+	3201	17	novel_in_catalog	CDK16	novel	562	3	NA	NA	6	0	intron_retention	FALSE	canonical	1	2746	junction_1	443751.60107742413	NA	5	1	TRUE	NA	NA	NA	C	coding	496	1491	486	1976	35.0	-15	True	ATTAAA	-13
PB.6043.2	chr19	-	1981	14	novel_not_in_catalog	SMG9	novel	5510	14	NA	NA	-10	241	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	119163.09054500343	NA	3	NA	TRUE	NA	NA	NA	C	coding	460	1383	152	1534	15.0	-12	True	AATAAA	-19
PB.5652.2	chr19	-	900	3	full-splice_match	CD70	ENST00000245903.3	913	3	-4	17	-4	-17	multi-exon	FALSE	canonical	1	511727	junction_2	25040.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	155	736	65.0	9657	False	NA	NA
PB.5652.1	chr19	-	1391	3	full-splice_match	CD70	ENST00000245903.3	913	3	-4	-474	-4	474	multi-exon	FALSE	canonical	1	511727	junction_2	25040.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	155	736	85.0	9657	False	NA	NA
PB.6043.1	chr19	-	5838	12	novel_in_catalog	SMG9	novel	5510	14	NA	NA	-13	241	intron_retention	FALSE	canonical	1	203849	junction_11	84378.45579322714	NA	2	NA	TRUE	NA	NA	NA	C	coding	312	939	289	1227	15.0	-15	True	AATAAA	-19
PB.6043.7	chr19	-	2784	13	novel_in_catalog	SMG9	novel	5510	14	NA	NA	0	233	intron_retention	FALSE	canonical	1	203849	junction_12	80788.60446779711	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	344	1282	15.0	-1	True	AATAAA	-11
PB.6043.4	chr19	-	2286	14	full-splice_match	SMG9	ENST00000270066.10	5510	14	60	3164	-8	234	multi-exon	FALSE	canonical	1	203849	junction_13	82142.31019899796	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	284	1846	20.0	-10	True	AATAAA	-12
PB.6043.5	chr19	-	2163	13	novel_in_catalog	SMG9	novel	5510	14	NA	NA	2	234	no_combination_of_known_junctions	FALSE	canonical	1	19705	junction_8	123334.09807068652	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	893	1723	20.0	0	True	AATAAA	-12
PB.9458.3	chr5	+	3755	22	novel_in_catalog	SEC24A	novel	6299	23	NA	NA	-25	-2395	no_combination_of_known_junctions	FALSE	canonical	1	14105	junction_2	63200.33389927297	NA	1	NA	TRUE	NA	NA	NA	C	coding	1035	3108	314	3421	25.0	-1	True	AATAAA	-21
PB.9458.2	chr5	+	3588	23	full-splice_match	SEC24A	ENST00000398844.6	6299	23	316	2395	281	-2395	multi-exon	FALSE	canonical	1	174896	junction_3	40746.67895172613	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	294	3254	25.0	274	False	AATAAA	-21
PB.9458.1	chr5	+	6359	23	full-splice_match	SEC24A	ENST00000398844.6	6299	23	27	-87	-8	87	multi-exon	FALSE	canonical	1	174896	junction_3	40746.67895172613	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	262	3543	35.0	10	True	AATAAA	-21
PB.2693.4	chr12	+	2297	7	novel_not_in_catalog	NAB2	novel	2711	7	NA	NA	-1456	-3	any annotated donor/acceptor	FALSE	canonical	1	364	junction_1	159439.00877913227	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	68	1546	20.0	594	False	AATAAA	-17
PB.9458.7	chr5	+	4020	24	novel_not_in_catalog	SEC24A	novel	6299	23	NA	NA	-4	-2395	any annotated donor/acceptor	FALSE	canonical	1	7122	junction_7	78028.18819325563	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	1875	3686	25.0	-21	True	AATAAA	-21
PB.9458.6	chr5	+	6221	22	novel_in_catalog	SEC24A	novel	6299	23	NA	NA	-11	85	no_combination_of_known_junctions	FALSE	canonical	1	14105	junction_2	63200.33389927297	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	300	3407	35.0	-28	True	AATAAA	-19
PB.9458.5	chr5	+	3751	23	full-splice_match	SEC24A	ENST00000398844.6	6299	23	-11	2559	-11	-2559	multi-exon	FALSE	canonical	1	174896	junction_3	40746.67895172613	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	300	3581	50.0	-28	True	AATAAA	-19
PB.9458.4	chr5	+	2742	13	full-splice_match	SEC24A	ENST00000322887.8	2700	13	-43	1	-8	-1	multi-exon	FALSE	canonical	1	18591	junction_12	70254.02021647152	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	297	2138	10.0	-25	True	AATAAA	-15
PB.11847.3	chr9	-	2020	5	full-splice_match	TOR1A	ENST00000351698.4	2076	5	-13	69	-13	-69	multi-exon	FALSE	canonical	1	426167	junction_3	144659.4116796415	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	63	1061	20.0	-12	True	TATAAA	-22
PB.11050.14	chr8	+	4087	31	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	53763	junction_1	175134.87911884752	NA	1	NA	TRUE	NA	NA	NA	C	coding	1009	3030	178	3207	0.0	-9	True	ATTAAA	-18
PB.11050.17	chr8	+	4876	4	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	2	10794	any annotated donor/acceptor	FALSE	canonical	1	717	junction_1	3104.9144200050923	NA	5	NA	TRUE	NA	NA	NA	C	coding	144	435	625	1059	30.0	-6	True	NA	NA
PB.6340.1	chr2	-	2801	3	intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1009	junction_1	406.5	NA	2	NA	FALSE	NA	NA	NA	A	coding	81	246	368	613	35.0	3308	False	AATAAA	-21
PB.11050.11	chr8	+	4046	30	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-23	-3	no_combination_of_known_junctions	FALSE	canonical	1	20250	junction_25	189853.91445652032	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	179	3172	0.0	-17	True	ATTAAA	-12
PB.11050.10	chr8	+	3878	31	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	-28	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_30	177378.9214201714	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	184	3087	0.0	-22	True	ATTAAA	-15
PB.11050.13	chr8	+	3937	30	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	8060	junction_1	168461.413896406	NA	4	NA	TRUE	NA	NA	NA	C	coding	967	2904	152	3055	5.0	-12	True	ATTAAA	-20
PB.11050.12	chr8	+	4326	29	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-9	0	intron_retention	FALSE	canonical	1	256180	junction_1	145062.82550587773	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	1308	3449	0.0	-3	True	ATTAAA	-15
PB.11088.2	chr8	-	5964	5	full-splice_match	RAB11FIP1	ENST00000287263.8	6253	5	-45	334	-45	-3	multi-exon	FALSE	canonical	1	227101	junction_2	52079.762563662865	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	72	2021	25.0	-16	False	AATAAA	-17
PB.5100.1	chr17	-	1631	1	antisense	novelGene_KAT7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.11050.18	chr8	+	4735	3	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	5	10793	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_2	23145.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	485	919	25.0	-3	True	NA	NA
PB.6956.1	chr2	-	3024	13	full-splice_match	ICA1L	ENST00000358299.6	3457	13	270	163	20	-163	multi-exon	FALSE	canonical	1	12257	junction_12	11860.393237285834	NA	0	NA	TRUE	NA	NA	NA	A	coding	482	1449	105	1553	65.0	-9	True	NA	NA
PB.8965.1	chr4	+	4621	29	incomplete-splice_match	KIAA1109	ENST00000264501.8	15896	86	-1	122823	-1	0	3prime_fragment	FALSE	canonical	1	69826	junction_22	31373.51072851742	NA	0	NA	TRUE	NA	NA	NA	B	coding	1415	4245	375	4619	80.0	-30	True	NA	NA
PB.88.1	chr1	-	1221	8	full-splice_match	SRM	ENST00000376957.6	1266	8	42	3	38	-3	multi-exon	FALSE	canonical	1	1007324	junction_7	416221.8576582563	NA	0	NA	TRUE	NA	NA	NA	A	coding	302	909	40	948	25.0	-1	True	NA	NA
PB.1382.21	chr10	-	1689	4	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-15	-471	any annotated donor/acceptor	FALSE	canonical	1	724344	junction_3	555872.8512266892	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	301	1545	25.0	3	True	ATTAAA	-16
PB.6798.1	chr2	-	3092	17	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	-25	7	intron_retention	FALSE	canonical	1	23843	junction_16	51069.7964630499	NA	1	1	TRUE	NA	NA	NA	B	coding	951	2853	238	3090	40.0	7	True	AAAAAG	-45
PB.881.5	chr1	+	1439	6	novel_not_in_catalog	FCGR2B	novel	1440	7	NA	NA	11	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	92873.13107976926	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	AAAACA	-5
PB.6798.2	chr2	-	3234	17	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	101	2	intron_retention	FALSE	canonical	1	22713	junction_16	47544.33616007635	NA	1	1	TRUE	NA	NA	NA	B	coding	984	2952	283	3234	45.0	-1	True	AAAAAG	-40
PB.11088.8	chr8	-	3345	5	full-splice_match	RAB11FIP1	ENST00000287263.8	6253	5	-42	2950	-42	1191	multi-exon	FALSE	canonical	1	227101	junction_2	52079.762563662865	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	69	2018	85.0	-13	False	AAAAAG	-32
PB.42.4	chr1	-	3300	10	novel_in_catalog	WRAP73	novel	1998	11	NA	NA	-29	-7	intron_retention	FALSE	canonical	1	191395	junction_9	33774.42456784259	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	2134	3099	25.0	0	True	AATAAA	-16
PB.881.3	chr1	+	1524	8	full-splice_match	FCGR2B	ENST00000358671.9	2115	8	-16	607	-2	-6	multi-exon	FALSE	canonical	1	10	junction_1	81404.39552515777	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	98	1030	45.0	NA	False	AAAACA	-5
PB.11088.9	chr8	-	2041	5	full-splice_match	RAB11FIP1	ENST00000287263.8	6253	5	-57	4269	-57	8	multi-exon	FALSE	canonical	1	227101	junction_2	52079.762563662865	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	84	2033	55.0	-28	False	AAAAAG	-23
PB.8359.1	chr3	-	2879	12	full-splice_match	MUC13	ENST00000616727.4	2879	12	0	0	0	0	multi-exon	FALSE	canonical	1	131881	junction_3	16034.914841275027	NA	0	NA	TRUE	NA	NA	NA	A	coding	512	1539	40	1578	0.0	-1	True	AATAAA	-20
PB.3061.5	chr13	-	3052	9	incomplete-splice_match	CENPJ	ENST00000545981.5	4299	18	-50	16361	20	-10354	3prime_fragment	FALSE	canonical	1	72395	junction_8	23588.351576771427	NA	1	NA	TRUE	NA	NA	NA	C	coding	962	2886	167	3052	55.0	-11	True	AATAGA	-8
PB.9349.18	chr5	-	3230	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	50.0	-1	True	AATAAA	-20
PB.9349.19	chr5	-	3110	19	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	34555	junction_5	46969.29583265468	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	164	2203	50.0	-1	True	AATAAA	-20
PB.1296.2	chr10	+	1934	12	full-splice_match	SEC61A2	ENST00000298428.13	1893	12	-41	0	-8	0	multi-exon	FALSE	canonical	1	56684	junction_1	38483.18061608965	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	131	1561	20.0	-31	True	AATAAA	-17
PB.9349.14	chr5	-	3877	22	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	538	combination_of_known_junctions	FALSE	canonical	1	35397	junction_15	42836.76657163709	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	164	2422	35.0	-1	True	AATAAA	-14
PB.9349.15	chr5	-	3383	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	143	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	35.0	-1	True	ATTAAA	-15
PB.9349.16	chr5	-	3329	22	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	35397	junction_15	42836.76657163709	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	164	2422	50.0	-1	True	AATAAA	-20
PB.3654.4	chr14	-	2839	15	incomplete-splice_match	ATG2B	ENST00000359933.5	13684	42	453	46486	453	-7965	3prime_fragment	FALSE	canonical	1	67099	junction_4	19695.979773672036	NA	1	NA	TRUE	NA	NA	NA	C	coding	799	2397	442	2838	50.0	-77	True	NA	NA
PB.9349.10	chr5	-	3914	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	674	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	30.0	-1	True	ATTAAA	-29
PB.1296.1	chr10	+	2535	12	full-splice_match	SEC61A2	ENST00000298428.13	1893	12	-48	-594	10	9	multi-exon	FALSE	canonical	1	56684	junction_1	38483.18061608965	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	138	1568	25.0	-38	True	AATAAA	-31
PB.3654.1	chr14	-	8687	42	full-splice_match	ATG2B	ENST00000359933.5	13684	42	509	4488	509	-4488	multi-exon	TRUE	canonical	1	67099	junction_31	27777.78257131798	NA	11	1	TRUE	NA	NA	NA	C	coding	2078	6237	386	6622	25.0	-21	True	ATTAAA	-23
PB.9349.13	chr5	-	3783	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	543	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	30.0	-1	True	AATAAA	-19
PB.6924.8	chr2	+	2771	7	full-splice_match	MOB4	ENST00000448447.6	1021	7	19	-1769	-8	-918	multi-exon	FALSE	canonical	1	122184	junction_1	121255.54965398033	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	22	636	45.0	0	True	CATAAA	-8
PB.2398.2	chr12	-	2211	14	novel_in_catalog	CRACR2A	novel	3207	15	NA	NA	-11	-36	combination_of_known_junctions	FALSE	canonical	1	23702	junction_1	15672.184294354538	NA	0	NA	TRUE	NA	NA	NA	B	coding	462	1389	584	1972	40.0	1	True	AATAAA	-20
PB.6924.2	chr2	+	2641	8	novel_in_catalog	HSPE1	novel	950	4	NA	NA	0	49151	no_combination_of_known_junctions	FALSE	canonical	1	1502	junction_1	148873.37578860056	NA	5	1	TRUE	NA	NA	NA	C	coding	206	621	59	679	55.0	0	True	CATAAA	-9
PB.6924.3	chr2	+	468	4	full-splice_match	HSPE1	ENST00000233893.9	950	4	405	77	20	-1	multi-exon	FALSE	canonical	1	487837	junction_3	876079.2607738184	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	39	347	35.0	-5	True	AATAAA	-17
PB.6924.1	chr2	+	2318	3	novel_in_catalog	HSPE1	novel	950	4	NA	NA	2	0	intron_retention	FALSE	canonical	1	487837	junction_2	1033822.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	75	228	87	314	30.0	-7	True	AATAAA	-19
PB.6924.6	chr2	+	3759	8	full-splice_match	MOB4	ENST00000323303.8	3986	8	234	-7	-8	7	multi-exon	FALSE	canonical	1	257019	junction_2	84749.0601308429	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	22	699	35.0	0	True	AGTAAA	-23
PB.6924.7	chr2	+	2834	8	full-splice_match	MOB4	ENST00000323303.8	3986	8	234	918	-8	-918	multi-exon	FALSE	canonical	1	257019	junction_2	84749.0601308429	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	22	699	45.0	0	True	CATAAA	-8
PB.6924.4	chr2	+	2979	1	novel_in_catalog	HSPE1	novel	950	4	NA	NA	25	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	100	303	593	895	30.0	0	True	AATAAA	-19
PB.9020.3	chr4	+	3368	24	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	25	0	intron_retention	FALSE	canonical	1	481	junction_13	57410.75276381048	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	215	1462	15.0	0	True	AATAAA	-14
PB.12368.1	chrX	+	2782	1	intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	114	345	2	346	60.0	NA	False	NA	NA
PB.2129.5	chr11	+	3136	1	novel_in_catalog	MYEOV	novel	599	2	NA	NA	0	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	255	768	1471	2238	10.0	0	True	AATAAA	-29
PB.2129.4	chr11	+	2294	3	full-splice_match	MYEOV	ENST00000308946.3	2287	3	-8	1	-4	-1	multi-exon	FALSE	canonical	1	32756	junction_1	3092.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	459	1400	15.0	-8	True	AATAAA	-25
PB.2129.3	chr11	+	2488	2	full-splice_match	MYEOV	ENST00000535653.1	2468	2	-21	1	5	-1	multi-exon	FALSE	canonical	1	69034	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	827	1594	15.0	-12	True	AATAAA	-25
PB.2129.2	chr11	+	2905	5	novel_in_catalog	MYEOV	novel	1996	3	NA	NA	5	1672	combination_of_known_junctions	FALSE	canonical	1	12165	junction_2	12174.334981837817	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1591	2040	15.0	-12	True	NA	NA
PB.2129.1	chr11	+	2404	3	full-splice_match	MYEOV	ENST00000441339.2	1996	3	-2	-406	-2	4	multi-exon	FALSE	canonical	1	38941	junction_2	15046.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	564	1505	10.0	-19	True	AATAAA	-30
PB.7160.5	chr20	-	6860	16	novel_in_catalog	SLC23A2	novel	6944	17	NA	NA	-11	-2	no_combination_of_known_junctions	TRUE	canonical	1	14187	junction_10	65264.25683375413	NA	11	NA	TRUE	NA	NA	NA	C	coding	338	1017	1230	2246	5.0	-9	True	AATAAA	-17
PB.4281.8	chr16	-	6638	25	incomplete-splice_match	SMG1	ENST00000565324.5	12465	61	51384	0	3880	0	5prime_fragment	TRUE	canonical	1	234808	junction_8	73460.43292309312	NA	0	NA	TRUE	NA	NA	NA	B	coding	1587	4764	66	4829	60.0	NA	False	NA	NA
PB.4281.9	chr16	-	4092	1	novel_in_catalog	SMG1	novel	16115	63	NA	NA	-10032	-10109	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	26	NA	NA	NA	NA	NA	B	coding	1060	3180	913	4092	75.0	NA	False	NA	NA
PB.8368.1	chr3	+	3257	1	novel_in_catalog	CHCHD6	novel	1006	8	NA	NA	131	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	117	354	633	986	25.0	2	True	AATAAA	-19
PB.11625.88	chr9	-	1788	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	14	56	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	192	1580	30.0	362	False	NA	NA
PB.11476.1	chr9	+	5503	6	full-splice_match	ACER2	ENST00000340967.2	2238	6	-115	-3150	-115	3150	multi-exon	FALSE	canonical	1	12	junction_5	4751.40827123917	NA	4	NA	TRUE	NA	NA	NA	A	coding	275	828	142	969	10.0	-65	False	ATTAAA	-12
PB.981.15	chr1	+	5795	22	full-splice_match	SMG7	ENST00000347615.6	5788	22	-3	-4	-1	0	multi-exon	FALSE	canonical	1	129392	junction_1	104469.04996519489	NA	2	NA	TRUE	NA	NA	NA	C	coding	1137	3414	123	3536	20.0	-8	True	ATTAAA	-18
PB.9749.6	chr6	+	3396	10	novel_in_catalog	SIRT5	novel	4382	9	NA	NA	0	-450	combination_of_known_junctions	FALSE	canonical	1	24663	junction_1	51731.789472238444	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	221	1153	35.0	-2	True	ATTAAA	-24
PB.7160.4	chr20	-	6826	16	novel_in_catalog	SLC23A2	novel	6944	17	NA	NA	-11	-2	no_combination_of_known_junctions	FALSE	canonical	1	13767	junction_15	60107.287304027355	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	263	2212	5.0	-9	True	AATAAA	-17
PB.9749.7	chr6	+	1545	10	full-splice_match	SIRT5	ENST00000606117.1	3922	10	-16	2393	-16	-2393	multi-exon	FALSE	canonical	1	6451	junction_1	56725.40387224348	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	313	1245	55.0	0	True	NA	NA
PB.11495.23	chr9	-	2855	4	novel_not_in_catalog	TOPORS	novel	4098	3	NA	NA	-75	-1141	any annotated donor/acceptor	FALSE	canonical	1	3820	junction_2	56155.617991435196	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2355	499	2853	75.0	-43	True	NA	NA
PB.11625.89	chr9	-	1816	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	2	56	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	220	1608	30.0	-16	True	NA	NA
PB.11056.10	chr8	+	3124	15	full-splice_match	ELP3	ENST00000256398.12	3452	15	321	7	11	-1	multi-exon	FALSE	canonical	1	226730	junction_1	57242.86602944778	NA	2	NA	TRUE	NA	NA	NA	C	coding	547	1644	57	1700	35.0	13	True	AATAAA	-15
PB.10704.2	chr7	+	4203	7	full-splice_match	ZKSCAN5	ENST00000326775.9	4178	7	23	-48	-1	10	multi-exon	FALSE	canonical	1	26010	junction_1	28452.40467722661	NA	2	NA	TRUE	NA	NA	NA	C	coding	837	2514	107	2620	15.0	-1	True	NA	NA
PB.954.7	chr1	-	2854	21	novel_in_catalog	COP1	novel	2131	9	NA	NA	-190	0	combination_of_known_junctions	FALSE	canonical	1	4373	junction_12	129904.49067753588	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2238	296	2533	25.0	-30	True	AATAAA	-37
PB.7226.4	chr20	-	2555	3	novel_in_catalog	BCL2L1	novel	2578	2	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	1	19742	junction_2	469749.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	365	1066	30.0	-9	True	AATAAA	-17
PB.7226.6	chr20	-	2411	3	novel_in_catalog	BCL2L1	novel	2578	2	NA	NA	-17	-8	combination_of_known_junctions	FALSE	canonical	1	29253	junction_2	464994.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	221	922	30.0	-12	True	AATAAA	-17
PB.7226.7	chr20	-	2426	3	novel_in_catalog	BCL2L1	novel	2578	2	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	1	12529	junction_2	473356.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	236	937	30.0	-9	True	AATAAA	-17
PB.7226.1	chr20	-	2507	3	full-splice_match	BCL2L1	ENST00000307677.4	2610	3	95	8	57	-8	multi-exon	FALSE	canonical	1	529726	junction_2	214757.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	317	1018	30.0	-1	True	AATAAA	-17
PB.7226.2	chr20	-	2768	3	novel_in_catalog	BCL2L1	novel	2578	2	NA	NA	15	-9	combination_of_known_junctions	FALSE	canonical	1	311483	junction_2	323879.0	NA	3	1	TRUE	NA	NA	NA	C	coding	233	702	579	1280	30.0	876	False	AATAAA	-16
PB.7226.3	chr20	-	2552	3	full-splice_match	BCL2L1	ENST00000450273.1	894	3	-83	-1575	6	-8	multi-exon	FALSE	canonical	1	35473	junction_2	461884.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	362	1063	30.0	-24	False	AATAAA	-17
PB.12352.1	chrX	+	1353	13	full-splice_match	FAM50A	ENST00000393600.7	1352	13	-5	4	-5	-4	multi-exon	FALSE	canonical	1	663691	junction_1	273406.00501008827	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	116	1135	25.0	-48	False	AATAAA	-42
PB.12352.3	chrX	+	1571	11	novel_in_catalog	FAM50A	novel	1352	13	NA	NA	-10	-6	intron_retention	FALSE	canonical	1	663691	junction_1	282782.813191396	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	92	1183	25.0	4	True	AATAAA	-40
PB.12352.2	chrX	+	2740	11	novel_in_catalog	FAM50A	novel	1352	13	NA	NA	13	-32	intron_retention	FALSE	canonical	1	1054602	junction_3	191960.75753538794	NA	1	NA	TRUE	NA	NA	NA	C	coding	348	1047	1504	2550	20.0	-2	True	AATAAA	-14
PB.7226.8	chr20	-	2453	3	novel_not_in_catalog	BCL2L1	novel	2578	2	NA	NA	-18	-8	any annotated donor/acceptor	FALSE	canonical	1	43875	junction_2	457683.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	263	964	30.0	-18	True	AATAAA	-17
PB.12352.4	chrX	+	1479	12	full-splice_match	FAM50A	ENST00000464419.5	1470	12	-10	1	-10	-1	multi-exon	FALSE	canonical	1	663691	junction_1	285356.56339037826	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	92	1258	25.0	4	True	AATAAA	-45
PB.10704.3	chr7	+	2833	5	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	26010	junction_1	36124.48178867069	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	107	2401	15.0	-1	True	AGTAAA	-17
PB.4505.3	chr16	+	2568	6	full-splice_match	PLA2G15	ENST00000566188.5	1203	6	0	-1365	0	1	multi-exon	FALSE	canonical	1	19624	junction_4	57348.556907388695	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	55	765	15.0	0	True	AATAAA	-19
PB.4505.2	chr16	+	2787	7	novel_in_catalog	PLA2G15	novel	1346	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	6988	junction_2	67766.84470648033	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	55	1389	20.0	0	True	AATAAA	-17
PB.4505.1	chr16	+	2724	6	full-splice_match	PLA2G15	ENST00000219345.9	2727	6	-2	5	1	1	multi-exon	FALSE	canonical	1	107013	junction_1	27199.666927372473	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	86	1324	15.0	-2	True	AATAAA	-19
PB.3125.30	chr13	-	1680	8	incomplete-splice_match	ELF1	ENST00000239882.6	3566	9	5	8773	5	-7368	3prime_fragment	FALSE	canonical	1	290146	junction_7	167160.04482616566	NA	4	1	TRUE	NA	NA	NA	C	coding	419	1260	311	1570	30.0	6	True	AATAAA	-19
PB.3125.31	chr13	-	2600	4	novel_in_catalog	ELF1	novel	3563	9	NA	NA	-15	-15936	intron_retention	FALSE	canonical	1	117785	junction_3	314378.19420882233	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	286	654	80.0	-19	False	NA	NA
PB.3125.32	chr13	-	6835	3	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	3	13243	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58892.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.990.10	chr1	-	2421	14	novel_not_in_catalog	FAM129A	novel	602	4	NA	NA	-24	-1422	any annotated donor/acceptor	FALSE	canonical	1	1356	junction_13	94754.5612554354	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2202	219	2420	65.0	-35	False	NA	NA
PB.8826.6	chr4	+	3451	24	full-splice_match	USO1	ENST00000514213.6	4034	24	60	523	55	-523	multi-exon	FALSE	canonical	0	0	junction_1	316182.78788999625	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	168	3056	20.0	-14	True	NA	NA
PB.1226.1	chr1	-	8462	45	full-splice_match	HEATR1	ENST00000366582.7	8447	45	-12	-3	-12	3	multi-exon	FALSE	canonical	1	193779	junction_36	111597.17430122539	NA	0	NA	TRUE	NA	NA	NA	C	coding	2144	6435	128	6562	20.0	-29	True	CATAAA	-20
PB.1226.6	chr1	-	7011	45	full-splice_match	HEATR1	ENST00000366582.7	8447	45	-10	1446	-10	220	multi-exon	FALSE	canonical	1	193779	junction_36	111597.17430122539	NA	0	NA	TRUE	NA	NA	NA	C	coding	2144	6435	126	6560	35.0	-27	True	AAGAAA	-25
PB.1226.7	chr1	-	6783	45	full-splice_match	HEATR1	ENST00000366582.7	8447	45	-4	1668	-4	-2	multi-exon	FALSE	canonical	1	193779	junction_36	111597.17430122539	NA	8	3	TRUE	NA	NA	NA	C	coding	2144	6435	120	6554	20.0	-21	True	AGTAAA	-16
PB.1226.4	chr1	-	7637	45	full-splice_match	HEATR1	ENST00000366582.7	8447	45	-19	829	-19	-829	multi-exon	FALSE	canonical	1	193779	junction_36	111597.17430122539	NA	1	NA	TRUE	NA	NA	NA	C	coding	2144	6435	135	6569	20.0	-36	True	AATAAA	-15
PB.1226.5	chr1	-	7134	45	full-splice_match	HEATR1	ENST00000366582.7	8447	45	-19	1332	-19	334	multi-exon	FALSE	canonical	1	193779	junction_36	111597.17430122539	NA	0	NA	TRUE	NA	NA	NA	C	coding	2144	6435	135	6569	20.0	-36	True	CATAAA	-36
PB.8695.1	chr4	+	4263	18	full-splice_match	SH3TC1	ENST00000245105.7	4226	18	-48	11	15	1	multi-exon	FALSE	canonical	1	43933	junction_2	59493.84340478151	NA	2	NA	TRUE	NA	NA	NA	C	coding	1336	4011	116	4126	35.0	1	True	AATAAA	-16
PB.2241.8	chr11	+	1777	2	full-splice_match	JRKL	ENST00000332349.4	2855	2	34	1044	34	-1044	multi-exon	FALSE	canonical	1	49967	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1563	214	1776	35.0	15	True	AATAAA	-17
PB.928.4	chr1	+	2860	7	novel_in_catalog	GORAB	novel	2189	5	NA	NA	-3	386	combination_of_known_junctions	FALSE	canonical	1	12211	junction_2	49545.97917563264	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	846	1490	20.0	-18	True	AATAAA	-12
PB.2241.6	chr11	+	2200	1	novel_in_catalog	JRKL	novel	736	3	NA	NA	26	-1038	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	523	1569	631	2199	35.0	7	True	AATAAA	-23
PB.2241.7	chr11	+	4021	1	novel_in_catalog	JRKL	novel	736	3	NA	NA	31	788	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	524	1575	626	2200	15.0	12	True	AGTAAA	-30
PB.2241.4	chr11	+	3077	2	full-splice_match	JRKL	ENST00000332349.4	2855	2	27	-249	27	249	multi-exon	FALSE	canonical	1	49967	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	524	1575	221	1795	30.0	8	True	AGTAAA	-14
PB.2241.5	chr11	+	2839	2	full-splice_match	JRKL	ENST00000332349.4	2855	2	19	-3	19	3	multi-exon	FALSE	canonical	1	49967	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	524	1575	229	1803	15.0	0	True	AATAAA	-23
PB.2241.2	chr11	+	3626	2	full-splice_match	JRKL	ENST00000332349.4	2855	2	7	-778	7	778	multi-exon	FALSE	canonical	1	49967	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	524	1575	241	1815	30.0	-12	False	AGTAAA	-20
PB.2241.3	chr11	+	3549	1	novel_in_catalog	JRKL	novel	736	3	NA	NA	21	306	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	524	1575	636	2210	30.0	2	True	AATAAA	-22
PB.471.4	chr1	-	2568	13	novel_in_catalog	LRRC40	novel	2884	15	NA	NA	51	-9	no_combination_of_known_junctions	FALSE	canonical	1	9423	junction_12	71399.16874180562	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	428	1582	40.0	-10	True	AATAAA	-40
PB.2241.1	chr11	+	2683	1	novel_in_catalog	JRKL	novel	736	3	NA	NA	577	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	524	1575	80	1654	30.0	558	False	AATAAA	-16
PB.11152.32	chr8	-	2786	12	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	1	41825	junction_3	800341.9632271349	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	206	1048	25.0	15	True	AATAAA	-19
PB.1023.1	chr1	-	3039	1	novel_in_catalog	MIR181A1HG	novel	930	3	NA	NA	-31852	42436	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.11152.30	chr8	-	2739	12	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-11	11	combination_of_known_junctions	FALSE	canonical	1	284930	junction_6	728340.2995080693	NA	2	NA	TRUE	NA	NA	NA	C	coding	251	756	237	992	35.0	-1	True	AATAAA	-28
PB.11152.31	chr8	-	2939	15	full-splice_match	ASPH	ENST00000519234.5	2874	15	-63	-2	-1	2	multi-exon	FALSE	canonical	1	221977	junction_13	791899.1435963274	NA	2	1	TRUE	NA	NA	NA	C	coding	327	984	218	1201	25.0	3	True	AATAAA	-19
PB.992.10	chr1	-	2130	12	incomplete-splice_match	TRMT1L	ENST00000367506.9	4392	15	28	6716	28	26	3prime_fragment	FALSE	canonical	1	100917	junction_11	36488.965852593516	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	251	2008	20.0	-1	True	AATAAA	-44
PB.992.11	chr1	-	3335	1	novel_in_catalog	TRMT1L	novel	4392	15	NA	NA	28	-9699	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	242	541	70.0	-1	True	NA	NA
PB.11152.34	chr8	-	2740	13	full-splice_match	ASPH	ENST00000518068.5	2744	13	7	-3	-2	1	multi-exon	FALSE	canonical	1	371773	junction_8	607100.1515494925	NA	3	NA	TRUE	NA	NA	NA	C	coding	270	813	191	1003	30.0	30	True	AATAAA	-18
PB.11912.1	chr9	+	2461	3	full-splice_match	PHPT1	ENST00000492540.5	1316	3	-1136	-9	-769	4	multi-exon	FALSE	canonical	1	311622	junction_2	1176282.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	1477	1854	10.0	-9	True	ATTAAA	-22
PB.3008.10	chr12	-	2536	14	novel_not_in_catalog	SCARB1	novel	3329	12	NA	NA	-59	-7	any annotated donor/acceptor	FALSE	canonical	1	234	junction_1	258613.41129327685	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	257	1786	40.0	4918	False	AATAAA	-6
PB.3008.11	chr12	-	1783	12	novel_not_in_catalog	SCARB1	novel	3329	12	NA	NA	-4	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	253350.3568935045	NA	4	NA	TRUE	NA	NA	NA	C	coding	444	1335	202	1536	40.0	-3	True	AATAAA	-6
PB.3008.12	chr12	-	2560	14	novel_not_in_catalog	SCARB1	novel	3329	12	NA	NA	9	-8	any annotated donor/acceptor	FALSE	canonical	1	309	junction_1	258598.42857945466	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	189	1718	40.0	10	True	AATAAA	-5
PB.11152.39	chr8	-	3245	5	incomplete-splice_match	ASPH	ENST00000518068.5	2744	13	-24	23977	4	-3916	3prime_fragment	FALSE	canonical	1	1265348	junction_4	496695.370339054	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	222	722	75.0	-1	True	AATGAA	-28
PB.10704.1	chr7	+	3828	7	novel_not_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	-2	-325	any annotated donor/acceptor	FALSE	canonical	1	10235	junction_4	33699.07581653967	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2511	108	2618	10.0	-2	True	NA	NA
PB.4972.1	chr17	+	2071	3	full-splice_match	TMEM99	ENST00000301665.7	2058	3	-12	-1	7	1	multi-exon	FALSE	canonical	1	194969	junction_1	10853.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	258	777	317	1093	0.0	-9092	False	NA	NA
PB.9989.4	chr6	+	1701	10	novel_not_in_catalog	TAF8	novel	794	5	NA	NA	0	2042	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	80126.70285349847	NA	5	NA	TRUE	NA	NA	NA	B	coding	310	933	19	951	25.0	-7	True	AATAAA	-39
PB.928.3	chr1	+	2130	5	novel_not_in_catalog	GORAB	novel	2189	5	NA	NA	4	-2	any annotated donor/acceptor	FALSE	canonical	1	2443	junction_1	54037.97028189993	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	15	1148	35.0	-299	False	AATAAA	-19
PB.9989.5	chr6	+	2258	6	novel_not_in_catalog	TAF8	novel	794	5	NA	NA	0	2025	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	102203.9378439011	NA	3	NA	TRUE	NA	NA	NA	B	coding	163	492	12	503	55.0	0	True	AATAAA	-22
PB.928.2	chr1	+	2485	7	novel_in_catalog	GORAB	novel	2189	5	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	12211	junction_2	49545.97917563264	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	859	1503	35.0	-299	False	AATAAA	-19
PB.7107.9	chr2	-	4567	18	novel_not_in_catalog	PASK	novel	4572	18	NA	NA	-90	5	any annotated donor/acceptor	FALSE	canonical	1	3527	junction_17	70326.77087468824	NA	4	NA	TRUE	NA	NA	NA	C	coding	1323	3972	320	4291	20.0	-80	False	ATTAAA	-24
PB.4519.1	chr16	+	4236	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	54	-4	-29	2	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	2	NA	TRUE	NA	NA	NA	C	coding	150	453	36	488	25.0	-14	True	AATAAA	-22
PB.4519.2	chr16	+	1999	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	24	2263	0	223	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	66	518	15.0	-1	True	NA	NA
PB.4519.3	chr16	+	3012	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	25	1249	1	1237	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	65	517	45.0	0	True	AATAAA	-16
PB.4519.4	chr16	+	2707	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	-8	1587	-8	899	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	98	550	25.0	-4	True	AAGAAA	-25
PB.4519.5	chr16	+	2476	3	full-splice_match	CYB5B	ENST00000514123.5	2492	3	-3	19	-3	-19	multi-exon	FALSE	canonical	1	1581524	junction_2	17079.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	69	452	100.0	-4	True	NA	NA
PB.4519.6	chr16	+	1462	3	full-splice_match	CYB5B	ENST00000514123.5	2492	3	1	1029	1	-1029	multi-exon	FALSE	canonical	1	1581524	junction_2	17079.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	65	448	80.0	0	True	NA	NA
PB.4519.7	chr16	+	4726	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	25	-465	1	463	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	65	517	45.0	0	True	AATAAA	-8
PB.4519.8	chr16	+	2381	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	25	1880	1	606	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	65	517	45.0	0	True	NA	NA
PB.4519.9	chr16	+	1761	5	full-splice_match	CYB5B	ENST00000307892.12	4286	5	68	2457	-15	29	multi-exon	FALSE	canonical	1	1150919	junction_3	212641.96459424467	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	22	474	30.0	0	True	AATAAA	-21
PB.123.1	chr1	+	4137	14	novel_not_in_catalog	MST1P2	novel	2291	18	NA	NA	-859	56	intron_retention	FALSE	canonical	1	1227	junction_5	34902.13388925767	NA	7	1	TRUE	NA	NA	NA	A	coding	143	432	3239	3670	35.0	4	True	NA	NA
PB.10704.6	chr7	+	3972	7	full-splice_match	ZKSCAN5	ENST00000394170.6	4344	7	8	364	8	-326	multi-exon	FALSE	canonical	1	17640	junction_1	30352.805173767163	NA	1	1	TRUE	NA	NA	NA	C	coding	837	2514	250	2763	15.0	-302	False	NA	NA
PB.1116.15	chr1	+	3778	7	novel_in_catalog	VASH2	novel	1369	9	NA	NA	9	-6	intron_retention	FALSE	canonical	1	13263	junction_3	23003.366287470963	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	1015	1458	85.0	10	True	NA	NA
PB.9989.2	chr6	+	2230	10	novel_not_in_catalog	TAF8	novel	794	5	NA	NA	0	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	80126.70285349847	NA	1	NA	TRUE	NA	NA	NA	B	coding	310	933	19	951	15.0	-7	True	NA	NA
PB.7160.3	chr20	-	6945	17	full-splice_match	SLC23A2	ENST00000338244.5	6944	17	-3	2	-3	-2	multi-exon	FALSE	canonical	1	98118	junction_16	46336.082643171765	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	382	2331	5.0	-1	True	AATAAA	-17
PB.2314.15	chr11	-	4538	26	novel_in_catalog	HYOU1	novel	4529	26	NA	NA	1	0	intron_retention	FALSE	canonical	1	21870	junction_25	339904.93046684924	NA	1	NA	TRUE	NA	NA	NA	C	coding	999	3000	135	3134	10.0	0	True	AATAAA	-15
PB.2314.14	chr11	-	4588	26	novel_in_catalog	HYOU1	novel	4529	26	NA	NA	-2	0	intron_retention	FALSE	canonical	1	4616	junction_25	342357.7753159732	NA	0	NA	TRUE	NA	NA	NA	C	coding	999	3000	185	3184	10.0	-3	True	AATAAA	-15
PB.2314.16	chr11	-	4281	25	novel_not_in_catalog	HYOU1	novel	4529	26	NA	NA	-3	0	intron_retention	FALSE	canonical	1	15744	junction_9	437925.9354140185	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	61	2877	10.0	-4	True	AATAAA	-15
PB.2054.2	chr11	-	1991	1	antisense	novelGene_NEAT1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-8519	False	NA	NA
PB.2314.13	chr11	-	4534	26	novel_not_in_catalog	HYOU1	novel	4529	26	NA	NA	-44	0	intron_retention	FALSE	canonical	1	15496	junction_4	395155.9413094046	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	102	2816	10.0	-23	False	AATAAA	-15
PB.2054.1	chr11	-	2217	1	antisense	novelGene_NEAT1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-8519	False	NA	NA
PB.9301.7	chr5	+	2554	18	incomplete-splice_match	IQGAP2	ENST00000505766.5	4255	32	89649	0	-17911	0	5prime_fragment	FALSE	canonical	1	192658	junction_8	52342.92782672792	NA	1	NA	TRUE	NA	NA	NA	C	coding	742	2226	327	2552	70.0	5113	False	CATAAA	-19
PB.10801.10	chr7	+	2276	10	full-splice_match	CAPZA2	ENST00000361183.7	5182	10	115	2791	1	1070	multi-exon	FALSE	canonical	1	322393	junction_8	409933.3686886742	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	25	885	30.0	1	True	AATATA	-14
PB.10704.7	chr7	+	3188	7	full-splice_match	ZKSCAN5	ENST00000394170.6	4344	7	15	1141	15	2	multi-exon	FALSE	canonical	1	17640	junction_1	30352.805173767163	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	243	2756	15.0	-295	False	AGTAAA	-17
PB.9301.2	chr5	+	5884	36	full-splice_match	IQGAP2	ENST00000274364.10	5844	36	-30	-10	-30	10	multi-exon	FALSE	canonical	1	79583	junction_14	60974.59623364739	NA	2	NA	TRUE	NA	NA	NA	C	coding	1575	4728	328	5055	45.0	-36	True	AATAAA	-30
PB.9301.3	chr5	+	5622	36	novel_in_catalog	IQGAP2	novel	5844	36	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	1	1585	junction_1	71373.59429886933	NA	4	NA	TRUE	NA	NA	NA	C	coding	1548	4647	158	4804	15.0	1034	False	AATAAA	-19
PB.9301.1	chr5	+	2922	22	incomplete-splice_match	IQGAP2	ENST00000274364.10	5844	36	-69	43080	-69	1	3prime_fragment	FALSE	canonical	1	79583	junction_14	56534.649996580214	NA	4	NA	TRUE	NA	NA	NA	C	coding	852	2556	367	2922	65.0	-196	False	AGTAAA	-7
PB.10879.1	chr7	-	2848	1	antisense	novelGene_LUC7L2_AS_novelGene_C7orf55-LUC7L2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6440	False	NA	NA
PB.5749.1	chr19	+	2799	5	novel_not_in_catalog	ZNF791	novel	4554	4	NA	NA	1	860	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	81514.5392261405	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	162	1892	75.0	-17	True	NA	NA
PB.11414.1	chr8	-	1295	2	full-splice_match	COMMD5	ENST00000402718.4	1305	2	5	5	5	-4	multi-exon	FALSE	canonical	1	153634	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	128	802	25.0	-34	True	NA	NA
PB.451.1	chr1	+	2182	14	full-splice_match	EFCAB7	ENST00000371088.4	2313	14	131	0	131	0	multi-exon	TRUE	canonical	1	51988	junction_6	16250.541862972961	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	116	2005	10.0	-31	True	ATTAAA	-19
PB.11414.3	chr8	-	1142	2	full-splice_match	COMMD5	ENST00000305103.3	1373	2	3	228	3	-228	multi-exon	FALSE	canonical	1	139665	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	251	925	20.0	-3	True	AGTAAA	-22
PB.8931.1	chr4	-	1640	7	full-splice_match	CASP6	ENST00000265164.6	1548	7	28	-120	-26	0	multi-exon	FALSE	canonical	1	169470	junction_4	34682.4859102785	NA	3	NA	TRUE	NA	NA	NA	A	coding	293	882	51	932	30.0	-1	True	AATAAA	-21
PB.4228.3	chr16	-	2172	11	novel_in_catalog	NAGPA	novel	2202	10	NA	NA	46	-9	combination_of_known_junctions	FALSE	canonical	1	15143	junction_6	66337.3247170098	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	385	933	45.0	62	False	AATAAA	-8
PB.4228.2	chr16	-	2273	9	incomplete-splice_match	NAGPA	ENST00000312251.7	2202	10	-8	37	-3	-9	intron_retention	FALSE	canonical	1	107732	junction_8	31477.18345385273	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	6	1676	45.0	-8	True	AATAAA	-8
PB.4228.1	chr16	-	3529	8	novel_in_catalog	NAGPA	novel	2202	10	NA	NA	-1	-9	intron_retention	FALSE	canonical	1	32829	junction_1	54135.94589511837	NA	2	NA	TRUE	NA	NA	NA	C	coding	264	795	14	808	45.0	7	True	AATAAA	-8
PB.6862.11	chr2	+	3053	11	full-splice_match	HNRNPA3	ENST00000411529.6	5688	11	8	2627	8	1246	multi-exon	FALSE	canonical	1	811	junction_3	190633.34146956034	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	44	1114	25.0	-37	False	ATTAAA	-16
PB.4228.4	chr16	-	2166	10	full-splice_match	NAGPA	ENST00000312251.7	2202	10	-1	37	-1	-9	multi-exon	FALSE	canonical	1	52949	junction_9	44464.0829353755	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	22	1569	45.0	-1	True	AATAAA	-8
PB.7921.4	chr3	+	5507	13	novel_in_catalog	ARPC4	novel	942	6	NA	NA	2	27654	intron_retention	FALSE	canonical	1	67516	junction_8	1068559.2124588317	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	3890	4948	70.0	15	True	NA	NA
PB.7921.5	chr3	+	3597	5	full-splice_match	ARPC4	ENST00000467289.5	729	5	15	-2883	-7	525	multi-exon	FALSE	canonical	1	1085857	junction_1	734147.1812189212	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	13	531	15.0	-5030	False	ATTAAA	-27
PB.5749.4	chr19	+	2372	5	novel_not_in_catalog	ZNF791	novel	4554	4	NA	NA	0	466	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	81514.5392261405	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	161	1891	35.0	-16	True	AATAAA	-18
PB.7921.2	chr3	+	1572	6	full-splice_match	ARPC4	ENST00000498623.6	942	6	33	-663	-30	533	multi-exon	FALSE	canonical	1	31339	junction_1	1044509.9992860958	NA	2	NA	TRUE	NA	NA	NA	C	coding	78	237	446	682	10.0	10	True	ATTAAA	-35
PB.7921.3	chr3	+	3371	12	novel_not_in_catalog	ARPC4	novel	942	6	NA	NA	0	27654	intron_retention	TRUE	non_canonical	0	0	junction_9	648653.5312717203	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	2016	2783	70.0	-1	True	NA	NA
PB.10704.4	chr7	+	3609	5	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	0	-326	no_combination_of_known_junctions	FALSE	canonical	1	26010	junction_1	36124.48178867069	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	106	2400	15.0	0	True	NA	NA
PB.5749.5	chr19	+	1855	4	full-splice_match	ZNF791	ENST00000343325.8	4554	4	7	2692	5	1123	multi-exon	FALSE	canonical	1	118090	junction_1	45916.19207740216	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1698	156	1853	60.0	-11	True	NA	NA
PB.11538.24	chr9	+	2240	16	novel_in_catalog	MELK	novel	2485	18	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	20148	junction_10	122161.22614723362	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	152	1897	10.0	-2	True	AATAAA	-15
PB.9796.2	chr6	-	2458	2	full-splice_match	HIST1H4H	ENST00000634560.1	1034	2	-79	-1345	25	1345	multi-exon	FALSE	canonical	1	108470	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	115	426	85.0	-80	False	NA	NA
PB.9796.1	chr6	-	2829	3	novel_not_in_catalog	HIST1H4H	novel	2163	3	NA	NA	20	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	54235.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	103	312	120	431	15.0	-85	False	NA	NA
PB.3981.4	chr15	-	1319	9	full-splice_match	SCAMP2	ENST00000268099.13	2453	9	9	1125	-1	0	multi-exon	FALSE	canonical	1	781621	junction_2	189588.3451329485	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	102	1091	15.0	7	True	AAAACA	-24
PB.3981.2	chr15	-	2501	10	novel_not_in_catalog	SCAMP2	novel	2453	9	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	4159	junction_3	447754.6266112476	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	100	837	25.0	9	True	AATAAA	-14
PB.3981.3	chr15	-	2384	9	novel_in_catalog	SCAMP2	novel	2453	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	8374	junction_8	373704.995056909	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	494	1033	25.0	340	False	AATAAA	-14
PB.3981.1	chr15	-	2443	9	full-splice_match	SCAMP2	ENST00000268099.13	2453	9	15	-5	5	5	multi-exon	FALSE	canonical	1	781621	junction_2	189588.3451329485	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	96	1085	15.0	13	True	AATAAA	-21
PB.11105.2	chr8	+	2505	2	antisense	novelGene_ANK1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1650	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	B	coding	119	360	290	649	10.0	-33	False	NA	NA
PB.11105.1	chr8	+	2031	4	antisense	novelGene_ANK1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	30.62678566222711	NA	0	NA	FALSE	NA	NA	NA	B	coding	119	360	384	743	80.0	-36	False	NA	NA
PB.6964.21	chr2	+	6287	16	full-splice_match	NRP2	ENST00000357118.8	3367	16	-759	-2161	0	-397	multi-exon	FALSE	canonical	1	8177	junction_15	56811.0191490661	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	791	3496	80.0	0	True	NA	NA
PB.6964.20	chr2	+	6500	16	full-splice_match	NRP2	ENST00000357118.8	3367	16	-759	-2374	0	-184	multi-exon	FALSE	canonical	1	8177	junction_15	56811.0191490661	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	791	3496	70.0	0	True	AATGAA	-37
PB.6964.23	chr2	+	1525	2	full-splice_match	NRP2	ENST00000478013.1	1072	2	-155	-298	2	298	multi-exon	FALSE	canonical	1	174450	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	2	True	NA	NA
PB.6964.22	chr2	+	6102	17	novel_in_catalog	NRP2	novel	1531	4	NA	NA	0	-397	combination_of_known_junctions	FALSE	canonical	1	8177	junction_16	62983.310225681016	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	606	3311	80.0	0	True	NA	NA
PB.6544.20	chr2	+	3704	12	novel_not_in_catalog	ZNF638	novel	871	5	NA	NA	-5	-1118	any annotated donor/acceptor	FALSE	canonical	1	1341	junction_11	136505.94871710546	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	302	2755	25.0	-5	True	AATAAA	-13
PB.10065.1	chr6	-	1253	3	novel_in_catalog	COX7A2	novel	914	5	NA	NA	7	0	intron_retention	FALSE	canonical	1	3245299	junction_1	286893.5	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-17	True	AATAAA	-16
PB.290.1	chr1	+	2414	9	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	-18	8718	-18	2470	3prime_fragment	FALSE	canonical	1	214552	junction_6	202159.7749638575	NA	1	NA	TRUE	NA	NA	NA	C	coding	724	2172	243	2414	65.0	1	True	AATACA	-42
PB.11151.1	chr8	+	3562	7	novel_not_in_catalog	CLVS1	novel	552	3	NA	NA	40375	6	any annotated donor/acceptor	TRUE	canonical	1	1468	junction_2	7041.206708843781	NA	2	NA	TRUE	NA	NA	NA	A	coding	354	1065	407	1471	20.0	-1	True	AATAAA	-23
PB.6544.27	chr2	+	5815	28	novel_not_in_catalog	ZNF638	novel	871	5	NA	NA	13	0	any annotated donor/acceptor	FALSE	canonical	1	6243	junction_24	178124.49555378623	NA	0	NA	TRUE	NA	NA	NA	C	coding	1655	4968	274	5241	30.0	13	True	AATAAA	-19
PB.6544.26	chr2	+	2427	8	novel_not_in_catalog	ZNF638	novel	871	5	NA	NA	9	4251	any annotated donor/acceptor	FALSE	canonical	1	11874	junction_5	153662.94757377662	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2148	278	2425	65.0	9	True	NA	NA
PB.6544.24	chr2	+	3868	16	novel_not_in_catalog	ZNF638	novel	871	5	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	229469.04094994796	NA	1	NA	TRUE	NA	NA	NA	C	coding	815	2448	283	2730	30.0	4	True	AATAAA	-19
PB.2608.3	chr12	+	1933	7	full-splice_match	ATF1	ENST00000262053.7	2181	7	-319	567	-105	545	multi-exon	FALSE	canonical	1	248518	junction_1	78187.83171241474	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	342	1157	30.0	-33	True	AATAAA	-25
PB.2608.2	chr12	+	2313	7	full-splice_match	ATF1	ENST00000262053.7	2181	7	-94	-38	-94	38	multi-exon	FALSE	canonical	1	248518	junction_1	78187.83171241474	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	117	932	15.0	-386	False	AATATA	-21
PB.2608.1	chr12	+	2364	7	full-splice_match	ATF1	ENST00000262053.7	2181	7	-324	141	-110	-141	multi-exon	TRUE	canonical	1	248518	junction_1	78187.83171241474	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	347	1162	45.0	-38	True	NA	NA
PB.9705.1	chr6	+	4589	2	full-splice_match	PSMG4	ENST00000473000.2	4603	2	6	8	6	-7	multi-exon	FALSE	canonical	1	430400	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	A	coding	104	315	57	371	30.0	-32	True	ATTAAA	-10
PB.11780.1	chr9	+	2357	10	full-splice_match	NEK6	ENST00000540326.5	2578	10	-116	337	-116	-337	multi-exon	FALSE	canonical	1	3290	junction_1	227602.20069869465	NA	3	NA	TRUE	NA	NA	NA	C	coding	313	942	262	1203	30.0	-5426	False	TATAAA	-31
PB.11780.3	chr9	+	2095	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	-51	1403	-44	-534	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	197	1138	60.0	-4997	False	NA	NA
PB.9545.9	chr5	+	2125	14	incomplete-splice_match	TCERG1	ENST00000394421.6	3633	21	-12	18058	8	0	3prime_fragment	FALSE	canonical	1	212876	junction_11	98246.2053609323	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2094	31	2124	75.0	-13	True	NA	NA
PB.9697.2	chr6	-	1360	7	full-splice_match	SERPINB6	ENST00000380546.7	1375	7	13	2	-5	1	multi-exon	FALSE	canonical	1	77514	junction_6	518366.79653568345	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	93	1223	5.0	-6	True	AATAAA	-26
PB.9697.1	chr6	-	1404	7	full-splice_match	SERPINB6	ENST00000380539.6	1315	7	-95	6	-1	-1	multi-exon	FALSE	canonical	1	316760	junction_6	441382.7559649587	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	141	1271	10.0	-2	True	AATAAA	-22
PB.11780.9	chr9	+	2764	11	full-splice_match	NEK6	ENST00000373600.7	3619	11	-25	880	-25	-11	multi-exon	FALSE	canonical	1	2138	junction_1	270847.9915963196	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	241	1284	40.0	-13	True	AATAAA	-30
PB.11780.8	chr9	+	2260	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	-18	1205	-11	-336	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	164	1105	30.0	1	True	TATAAA	-32
PB.7181.2	chr20	+	3662	3	incomplete-splice_match	MACROD2	ENST00000217246.8	4994	17	1991571	3	1152	-3	5prime_fragment	FALSE	canonical	1	19395	junction_2	34946.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	99	300	2023	2322	25.0	-115	False	AATAAA	-23
PB.290.7	chr1	+	2689	10	novel_in_catalog	THRAP3	novel	4432	12	NA	NA	-3	-2517	no_combination_of_known_junctions	FALSE	canonical	1	48940	junction_1	276850.36175982	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2580	109	2688	60.0	-25	True	NA	NA
PB.7181.1	chr20	+	3674	4	incomplete-splice_match	MACROD2	ENST00000378058.7	4025	10	124254	3	1209	-3	5prime_fragment	FALSE	canonical	1	66214	junction_3	9872.88709322433	NA	0	NA	TRUE	NA	NA	NA	B	coding	99	300	2035	2334	25.0	-4	True	AATAAA	-23
PB.763.2	chr1	+	3596	4	novel_in_catalog	CHTOP	novel	1840	4	NA	NA	6	0	intron_retention	FALSE	canonical	1	42757	junction_3	290622.4445339501	NA	5	NA	TRUE	NA	NA	NA	C	coding	178	537	2023	2559	15.0	-25	False	NA	NA
PB.11111.2	chr8	+	1240	13	novel_in_catalog	POLB	novel	675	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	183371	junction_1	82354.95892995253	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	544	1089	25.0	-8	True	AATAAA	-17
PB.9687.1	chr6	+	3313	1	novel_in_catalog	DUSP22	novel	405	6	NA	NA	8	-50113	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-36	True	NA	NA
PB.10704.8	chr7	+	3745	5	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	17	-325	no_combination_of_known_junctions	FALSE	canonical	1	17640	junction_1	38317.21386335389	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	241	2535	10.0	-293	False	NA	NA
PB.3398.8	chr14	+	2554	22	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-63	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	58124.0755622291	NA	1	NA	TRUE	NA	NA	NA	B	coding	681	2046	352	2397	40.0	-1753	False	AATAAA	-16
PB.3398.9	chr14	+	2934	23	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	59546.871512165635	NA	1	NA	TRUE	NA	NA	NA	B	coding	720	2163	615	2777	40.0	-1	True	AATAAA	-16
PB.9687.5	chr6	+	3900	5	full-splice_match	DUSP22	ENST00000605035.5	1231	5	-373	-2296	7	0	multi-exon	FALSE	canonical	1	104367	junction_3	120801.88000477268	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	3	377	20.0	-5	True	AATAAA	-20
PB.9687.4	chr6	+	2400	7	full-splice_match	DUSP22	ENST00000419235.6	3098	7	42	656	-16	-231	multi-exon	FALSE	canonical	1	207124	junction_4	111676.06612641862	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	37	654	45.0	-19	True	AATAAA	-42
PB.9687.7	chr6	+	3007	6	full-splice_match	DUSP22	ENST00000603795.5	1166	6	40	-1881	-18	-1	multi-exon	FALSE	canonical	1	104367	junction_3	148366.8023331365	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	298	606	20.0	-21	True	AATAAA	-19
PB.9687.6	chr6	+	6123	5	incomplete-splice_match	DUSP22	ENST00000344450.9	1485	8	7	3	7	-1	intron_retention	FALSE	canonical	1	207124	junction_4	77886.15455385829	NA	3	NA	TRUE	NA	NA	NA	C	coding	120	363	437	799	20.0	-5	True	AATAAA	-19
PB.3398.2	chr14	+	2704	22	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-454	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	61158.25763651043	NA	1	NA	TRUE	NA	NA	NA	B	coding	681	2046	278	2323	30.0	-19	True	AATAAA	-14
PB.9687.8	chr6	+	3062	7	full-splice_match	DUSP22	ENST00000419235.6	3098	7	39	-3	-19	1	multi-exon	FALSE	canonical	1	207124	junction_4	111676.06612641862	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	40	657	10.0	-22	True	AATAAA	-23
PB.9483.20	chr5	+	3816	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	33085	junction_3	1105627.0520241486	NA	1	1	TRUE	NA	NA	NA	C	coding	833	2502	271	2772	20.0	0	True	NA	NA
PB.3398.1	chr14	+	2587	23	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	482	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	60164.07940441355	NA	2	NA	TRUE	NA	NA	NA	B	coding	724	2175	256	2430	40.0	1	True	AATAAA	-16
PB.3398.6	chr14	+	2870	23	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-137	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	59720.27248670558	NA	1	NA	TRUE	NA	NA	NA	B	coding	724	2175	268	2442	30.0	-2152	False	AATAAA	-18
PB.3398.7	chr14	+	2946	23	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-54	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	56528.17762704464	NA	3	NA	TRUE	NA	NA	NA	B	coding	724	2175	343	2517	25.0	-9	True	AATAAA	-19
PB.3398.4	chr14	+	1804	1	novel_in_catalog	MIA2	novel	4392	28	NA	NA	-435	14815	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	96	291	38	328	80.0	0	True	NA	NA
PB.3398.5	chr14	+	2656	23	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-36	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	56528.17762704464	NA	1	NA	TRUE	NA	NA	NA	B	coding	724	2175	325	2499	40.0	-1726	False	AATAAA	-16
PB.5711.1	chr19	+	1328	10	full-splice_match	QTRT1	ENST00000250237.9	1317	10	-12	1	9	0	multi-exon	FALSE	canonical	1	432719	junction_2	131997.09146748856	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	23	1234	15.0	-15	True	NA	NA
PB.5711.3	chr19	+	1666	8	novel_in_catalog	QTRT1	novel	1571	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	499671	junction_1	112983.49782628092	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	438	1001	15.0	-3	True	NA	NA
PB.5711.2	chr19	+	1579	9	full-splice_match	QTRT1	ENST00000589488.5	1571	9	11	-19	-10	0	multi-exon	FALSE	canonical	1	432719	junction_2	127526.98769176027	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	21	914	15.0	-13	True	NA	NA
PB.9297.20	chr5	+	4367	21	novel_not_in_catalog	HMGCR	novel	3395	20	NA	NA	3	303	any annotated donor/acceptor	FALSE	canonical	1	2228	junction_1	224626.39023734495	NA	2	NA	TRUE	NA	NA	NA	C	coding	888	2667	317	2983	30.0	-142	False	AATAAA	-20
PB.7744.7	chr22	-	4195	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	63850.970562318	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	622	2676	30.0	-4	True	NA	NA
PB.11538.27	chr9	+	2246	16	full-splice_match	MELK	ENST00000536329.5	2283	16	35	2	0	0	multi-exon	FALSE	canonical	1	1559	junction_2	107405.64654169724	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	163	1902	10.0	0	True	AATAAA	-16
PB.7510.10	chr21	-	3082	13	novel_in_catalog	SETD4	novel	4272	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	22910	junction_11	45956.32960054759	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	382	1632	15.0	-3	True	ATTAAA	-15
PB.11932.29	chr9	+	3954	25	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	101	-31	any annotated donor/acceptor	FALSE	canonical	1	222	junction_11	133231.9579823308	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	1569	3197	80.0	-4307	False	AATAAA	-36
PB.2340.2	chr11	+	3365	18	full-splice_match	VWA5A	ENST00000392748.5	3419	18	46	8	0	-8	multi-exon	FALSE	canonical	1	30669	junction_1	50877.135303513714	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	49	2409	30.0	0	True	ATTAAA	-19
PB.2340.3	chr11	+	2543	18	full-splice_match	VWA5A	ENST00000392748.5	3419	18	46	830	0	-830	multi-exon	FALSE	canonical	1	30669	junction_1	50877.135303513714	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	49	2409	10.0	0	True	AGTAAA	-14
PB.2340.1	chr11	+	1864	10	full-splice_match	VWA5A	ENST00000361352.9	1863	10	-7	6	-7	-6	multi-exon	FALSE	canonical	1	30669	junction_1	50971.59370003049	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	102	1349	10.0	-8947	False	NA	NA
PB.7510.11	chr21	-	2614	12	full-splice_match	SETD4	ENST00000332131.8	3015	12	7	394	7	-393	multi-exon	FALSE	canonical	1	27000	junction_5	43640.004268015335	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	234	1556	20.0	6	True	AATAAA	-30
PB.10509.3	chr7	+	3917	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	43	-592	34	592	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	137	1381	40.0	0	True	ATTAAA	-15
PB.3901.6	chr15	-	4616	27	novel_in_catalog	MYO1E	novel	8673	28	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	4199	junction_10	106217.82151349408	NA	0	NA	TRUE	NA	NA	NA	C	coding	1075	3228	372	3599	15.0	-1	True	AATAAA	-20
PB.3901.7	chr15	-	4821	29	novel_not_in_catalog	MYO1E	novel	8673	28	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	3382	junction_27	122544.93665544796	NA	0	NA	TRUE	NA	NA	NA	C	coding	1085	3258	552	3809	25.0	-1	True	AATAAA	-15
PB.1542.9	chr10	+	4793	21	novel_in_catalog	KIF11	novel	4860	22	NA	NA	-125	-3	no_combination_of_known_junctions	FALSE	canonical	1	2486	junction_11	112217.29405604111	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2982	216	3197	25.0	-6804	False	AATAAA	-44
PB.1542.8	chr10	+	4321	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-154	693	-154	-693	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	245	3415	15.0	2	True	AATAAA	-16
PB.3901.2	chr15	-	4365	28	full-splice_match	MYO1E	ENST00000288235.8	8673	28	377	3931	4	1	multi-exon	FALSE	canonical	1	252081	junction_27	79609.92430612803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1108	3327	24	3350	20.0	594	False	AATAAA	-18
PB.8881.5	chr4	-	4541	18	full-splice_match	FAM13A	ENST00000508369.5	3169	18	-83	-1289	-26	-411	multi-exon	FALSE	canonical	1	42122	junction_17	42853.391808927	NA	1	NA	TRUE	NA	NA	NA	C	coding	697	2094	281	2374	45.0	3026	False	AATAAA	-23
PB.7042.20	chr2	-	4502	13	novel_not_in_catalog	WDFY1	novel	361	2	NA	NA	35	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	110235.8862941445	NA	7	NA	TRUE	NA	NA	NA	C	coding	410	1233	17	1249	20.0	-2	True	AATAAA	-16
PB.3901.1	chr15	-	6157	28	full-splice_match	MYO1E	ENST00000288235.8	8673	28	31	2485	2	1447	multi-exon	TRUE	canonical	1	252081	junction_27	79609.92430612803	NA	3	NA	TRUE	NA	NA	NA	C	coding	1108	3327	370	3696	25.0	1	True	ATTAAA	-11
PB.1542.3	chr10	+	1676	12	incomplete-splice_match	KIF11	ENST00000260731.4	4860	22	-181	25120	-181	-25120	3prime_fragment	TRUE	canonical	1	183050	junction_4	43743.033808749344	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1404	272	1675	55.0	0	True	AATAAA	-35
PB.1542.2	chr10	+	3327	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-181	1714	-181	-1714	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	0	NA	TRUE	NA	NA	NA	C	coding	1018	3054	272	3325	70.0	0	True	CATAAA	-12
PB.1542.1	chr10	+	3960	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-150	1050	-150	-1050	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	241	3411	45.0	6	True	TATAAA	-15
PB.9053.3	chr4	-	2159	6	full-splice_match	TMEM192	ENST00000306480.10	10012	6	57	7796	-8	16	multi-exon	FALSE	canonical	1	152292	junction_5	35690.43925423166	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	90	905	30.0	-3	True	ATTAAA	-43
PB.1542.7	chr10	+	4926	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-154	88	-154	-88	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	245	3415	50.0	2	True	AATAAA	-23
PB.1542.6	chr10	+	3440	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-115	1535	-115	-1535	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	206	3376	25.0	-6794	False	AATAAA	-16
PB.1542.5	chr10	+	3798	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-159	1221	-159	-1221	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	250	3420	75.0	-3	True	NA	NA
PB.1542.4	chr10	+	4783	22	full-splice_match	KIF11	ENST00000260731.4	4860	22	-159	236	-159	-236	multi-exon	FALSE	canonical	1	183050	junction_4	87899.63498550511	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	250	3420	25.0	-3	True	AATAAA	-15
PB.484.10	chr1	-	4561	24	novel_in_catalog	USP33	novel	4327	24	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	57	junction_23	116378.35171274847	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	310	2001	40.0	-4	True	AATAAA	-16
PB.118.3	chr1	-	2543	10	full-splice_match	FBXO42	ENST00000375592.7	6202	10	-14	3673	-14	570	multi-exon	FALSE	canonical	1	111657	junction_9	39564.93740986978	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	232	2385	70.0	4	True	NA	NA
PB.484.11	chr1	-	4219	23	novel_in_catalog	USP33	novel	4327	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	31823	junction_2	109814.2365218088	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	262	2724	40.0	17	False	AATAAA	-16
PB.5705.2	chr19	-	2226	2	full-splice_match	S1PR5	ENST00000439028.3	2191	2	-36	1	-36	-1	multi-exon	FALSE	canonical	1	5578	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	163	1359	0.0	-27	True	AATAAA	-17
PB.12102.1	chrX	-	3358	3	novel_in_catalog	FAM104B	novel	1067	4	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	153290	junction_2	49612.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	31	378	5.0	-21	True	NA	NA
PB.12102.2	chrX	-	3464	3	full-splice_match	FAM104B	ENST00000477847.6	1170	3	-15	-2279	-15	-6	multi-exon	FALSE	canonical	1	42847	junction_2	104834.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	150	488	10.0	-1	True	NA	NA
PB.5705.1	chr19	-	2135	2	full-splice_match	S1PR5	ENST00000333430.5	2341	2	1	205	1	0	multi-exon	FALSE	canonical	1	22805	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	71	1267	0.0	-3	True	AATAAA	-18
PB.484.12	chr1	-	3999	22	novel_in_catalog	USP33	novel	4327	24	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	14829	junction_5	114568.28941289875	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	260	2674	40.0	19	False	AATAAA	-16
PB.5096.1	chr17	+	3395	6	full-splice_match	NGFR	ENST00000172229.7	3417	6	0	22	0	-22	multi-exon	FALSE	canonical	1	39747	junction_1	23950.31841625493	NA	1	NA	TRUE	NA	NA	NA	A	coding	427	1284	126	1409	70.0	0	True	ATTAAA	-5
PB.3114.2	chr13	+	3744	5	incomplete-splice_match	UFM1	ENST00000239878.8	3138	6	-55	826	-23	-826	intron_retention	FALSE	canonical	1	242647	junction_4	185448.4404254994	NA	2	NA	TRUE	NA	NA	NA	C	coding	80	243	95	337	50.0	-28	True	AATAAA	-19
PB.4790.2	chr17	+	933	2	full-splice_match	UBB	ENST00000302182.7	1225	2	296	-4	0	-1	multi-exon	FALSE	canonical	1	31703212	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	97	786	20.0	0	True	AATAAA	-22
PB.5006.4	chr17	+	2532	12	novel_not_in_catalog	PSME3	novel	3082	13	NA	NA	-1	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	395356.4426352169	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	99	863	20.0	-20	True	ATTAAA	-34
PB.9637.4	chr5	+	3016	8	incomplete-splice_match	TSPAN17	ENST00000508164.5	2457	9	3	-1	0	1	intron_retention	FALSE	canonical	1	240671	junction_1	58346.968312546516	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	112	924	10.0	21	True	AATAAA	-16
PB.9498.4	chr5	-	3675	9	novel_in_catalog	APBB3	novel	2064	8	NA	NA	-4	0	intron_retention	FALSE	canonical	1	148930	junction_1	50025.17731103009	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	2568	3359	25.0	20	False	AATAAA	-18
PB.9637.5	chr5	+	2497	9	full-splice_match	TSPAN17	ENST00000508164.5	2457	9	-37	-3	-2	0	multi-exon	FALSE	canonical	1	233970	junction_8	66092.32384513348	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	152	1141	10.0	-19	True	AATAAA	-18
PB.10509.5	chr7	+	3568	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	43	-243	34	243	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	137	1381	30.0	0	True	AATAAA	-34
PB.484.17	chr1	-	3700	24	novel_in_catalog	USP33	novel	4327	24	NA	NA	-6	-573	combination_of_known_junctions	FALSE	canonical	1	102471	junction_11	95059.31663399698	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	236	2947	50.0	-16	True	AATAAA	-18
PB.8722.2	chr4	+	2566	28	novel_in_catalog	ANAPC4	novel	2685	29	NA	NA	23	-25	no_combination_of_known_junctions	FALSE	canonical	1	1747	junction_22	97814.97219407592	NA	12	1	TRUE	NA	NA	NA	C	coding	541	1626	120	1745	70.0	-36	True	NA	NA
PB.9498.2	chr5	-	4121	14	novel_in_catalog	SRA1	novel	461	3	NA	NA	-6321	28	intron_retention	FALSE	canonical	1	11188	junction_11	281831.66220822895	NA	0	NA	TRUE	NA	NA	NA	A	coding	263	792	1329	2120	20.0	1	True	AATAAA	-16
PB.5065.17	chr17	-	5202	20	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	0	-504	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154171.6794273743	NA	2	NA	TRUE	NA	NA	NA	C	coding	823	2472	81	2552	50.0	18	True	ATTAAA	-13
PB.5065.16	chr17	-	5337	19	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-25	-504	combination_of_known_junctions	FALSE	canonical	1	42428	junction_11	152678.4472806319	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	120	2609	50.0	-21	True	ATTAAA	-13
PB.5065.15	chr17	-	5066	20	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	-5	-503	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	161485.68983720956	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	100	1500	50.0	-1	True	ATTAAA	-14
PB.5065.14	chr17	-	5338	19	full-splice_match	CDC27	ENST00000066544.7	5801	19	-40	503	-40	-503	multi-exon	FALSE	canonical	1	62581	junction_12	149987.14950244	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	135	2609	50.0	31	False	ATTAAA	-14
PB.5065.13	chr17	-	5156	18	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-5	-499	combination_of_known_junctions	FALSE	canonical	1	34113	junction_16	156581.75178028032	NA	1	1	TRUE	NA	NA	NA	C	coding	762	2289	135	2423	35.0	-1	True	ATTAAA	-18
PB.5065.12	chr17	-	5324	20	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	-5	-244	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	154171.6794273743	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	100	2571	45.0	-1	True	ATTAAA	-16
PB.5065.11	chr17	-	5513	20	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	-34	-244	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	156051.2000284032	NA	1	1	TRUE	NA	NA	NA	C	coding	824	2475	129	2603	45.0	-30	True	ATTAAA	-16
PB.5065.10	chr17	-	5584	19	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-12	-244	combination_of_known_junctions	FALSE	canonical	1	42428	junction_11	152678.4472806319	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	107	2596	45.0	-8	True	ATTAAA	-16
PB.6535.21	chr2	-	3268	13	novel_in_catalog	C2orf42	novel	579	2	NA	NA	0	-29258	intron_retention	FALSE	canonical	1	48617	junction_8	229936.57486190018	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	1908	2648	45.0	-1	True	ATTAAA	-25
PB.8722.4	chr4	+	3372	27	novel_not_in_catalog	ANAPC4	novel	2685	29	NA	NA	37	-2	intron_retention	FALSE	canonical	1	12252	junction_23	97884.31200419209	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	106	1761	15.0	-22	True	AATAAA	-18
PB.5355.9	chr18	+	4858	15	full-splice_match	USP14	ENST00000582707.5	1803	15	156	-3211	3	-27	multi-exon	FALSE	canonical	1	23265	junction_3	239576.78130875976	NA	6	NA	TRUE	NA	NA	NA	C	coding	459	1380	161	1540	85.0	-50	True	NA	NA
PB.5355.8	chr18	+	2576	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-54	2399	-3	233	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	146	1630	20.0	-35	True	AATACA	-19
PB.5065.19	chr17	-	4265	19	full-splice_match	CDC27	ENST00000527547.5	2579	19	-28	-1658	0	1033	multi-exon	FALSE	canonical	1	62581	junction_12	147705.2233235566	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	81	2552	75.0	18	True	AAAAAG	-14
PB.5065.18	chr17	-	5265	20	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	-29	-505	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	160108.25181123507	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	124	2616	50.0	-25	True	ATTAAA	-12
PB.9483.21	chr5	+	1978	10	incomplete-splice_match	MATR3	ENST00000510056.5	3040	14	-17	7757	-3	9	3prime_fragment	FALSE	canonical	1	147046	junction_9	468561.37345364416	NA	2	NA	TRUE	NA	NA	NA	C	coding	569	1707	271	1977	55.0	0	True	AAAAAG	-43
PB.9637.2	chr5	+	2912	6	full-splice_match	TSPAN17	ENST00000507471.1	707	6	-211	-1994	22	-1	multi-exon	FALSE	canonical	1	27327	junction_1	142605.82877007517	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	208	822	15.0	7	True	AATAAA	-14
PB.6862.13	chr2	+	2261	11	full-splice_match	HNRNPA3	ENST00000411529.6	5688	11	1	3426	1	447	multi-exon	FALSE	canonical	1	811	junction_3	190633.34146956034	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	51	1121	15.0	-44	False	AATAAA	-23
PB.9637.3	chr5	+	2521	9	full-splice_match	TSPAN17	ENST00000515708.5	2361	9	-157	-3	24	2	multi-exon	FALSE	canonical	1	36398	junction_8	116226.84125235444	NA	4	NA	TRUE	NA	NA	NA	C	coding	263	792	206	997	15.0	9	True	AATAAA	-20
PB.10951.4	chr7	+	3172	12	novel_not_in_catalog	NOM1	novel	6077	11	NA	NA	-2	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	61298.10369075576	NA	3	NA	TRUE	NA	NA	NA	C	coding	861	2586	18	2603	30.0	-13	True	AATAAA	-28
PB.8221.10	chr3	-	4790	11	incomplete-splice_match	UBA3	ENST00000361055.8	2154	18	45	3214	0	-2646	3prime_fragment	FALSE	canonical	1	335944	junction_10	169217.9838901291	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	11	949	95.0	1	True	NA	NA
PB.3880.6	chr15	-	2310	6	novel_not_in_catalog	FAM214A	novel	4217	13	NA	NA	-14	2319	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	65210.07978035298	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1734	575	2308	30.0	4169	False	AATAAA	-16
PB.2580.5	chr12	-	3106	14	novel_in_catalog	DDX23	novel	3248	17	NA	NA	0	6	intron_retention	FALSE	canonical	1	3022	junction_8	215963.32762056327	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	1025	2395	35.0	-1	True	AATAAA	-21
PB.3880.5	chr15	-	2230	5	incomplete-splice_match	FAM214A	ENST00000619572.4	3548	12	-101	26948	4	2353	3prime_fragment	FALSE	canonical	1	98921	junction_4	21674.08482929556	NA	12	NA	TRUE	NA	NA	NA	C	coding	678	2034	197	2230	70.0	4725	False	NA	NA
PB.2580.1	chr12	-	3249	17	full-splice_match	DDX23	ENST00000308025.7	3248	17	6	-7	6	7	multi-exon	FALSE	canonical	1	231843	junction_2	179031.27141503626	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	75	2537	35.0	5	True	AATAAA	-22
PB.2580.2	chr12	-	5292	14	novel_in_catalog	DDX23	novel	3248	17	NA	NA	0	7	intron_retention	FALSE	canonical	1	231843	junction_2	168788.50636687953	NA	4	NA	TRUE	NA	NA	NA	C	coding	304	915	3666	4580	35.0	-1	True	AATAAA	-22
PB.3880.1	chr15	-	4310	13	full-splice_match	FAM214A	ENST00000261844.11	4217	13	-105	12	28	-12	multi-exon	FALSE	canonical	1	15515	junction_12	79077.11264733235	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	259	3489	65.0	4214	False	AATATA	-4
PB.763.9	chr1	+	2071	6	full-splice_match	CHTOP	ENST00000368690.7	2165	6	94	0	1	0	multi-exon	FALSE	canonical	1	424822	junction_3	112415.01226544433	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-4	True	NA	NA
PB.9498.8	chr5	-	2310	11	novel_in_catalog	APBB3	novel	2064	8	NA	NA	3	0	intron_retention	FALSE	canonical	1	126664	junction_8	57201.01728500989	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	142	771	25.0	2	True	AATAAA	-18
PB.8881.1	chr4	-	5479	24	full-splice_match	FAM13A	ENST00000264344.9	5858	24	-12	391	-12	-391	multi-exon	FALSE	canonical	1	26961	junction_17	49314.57912653438	NA	2	NA	TRUE	NA	NA	NA	C	coding	1023	3072	221	3292	10.0	-14	True	AATAAA	-43
PB.10200.7	chr6	+	1793	9	incomplete-splice_match	NCOA7	ENST00000392477.6	6457	16	199	42353	-3	8474	3prime_fragment	FALSE	canonical	1	76395	junction_1	35670.361177033235	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1623	171	1793	50.0	-25	True	NA	NA
PB.10200.6	chr6	+	5345	16	full-splice_match	NCOA7	ENST00000392477.6	6457	16	192	920	-10	-1	multi-exon	FALSE	canonical	1	76395	junction_1	125384.68598446232	NA	2	NA	TRUE	NA	NA	NA	C	coding	942	2829	178	3006	25.0	-32	True	AATAAA	-20
PB.10200.5	chr6	+	5315	16	novel_in_catalog	NCOA7	novel	5521	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	76395	junction_1	125701.1593901451	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	180	2975	25.0	-34	True	AATAAA	-21
PB.10200.4	chr6	+	5484	16	novel_in_catalog	NCOA7	novel	5521	17	NA	NA	-44	-4	no_combination_of_known_junctions	FALSE	canonical	1	4523	junction_1	132336.17872215528	NA	2	NA	TRUE	NA	NA	NA	C	coding	942	2829	320	3148	25.0	2	True	AATAAA	-17
PB.10200.3	chr6	+	5533	17	novel_in_catalog	NCOA7	novel	5521	17	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	1	29927	junction_2	132550.71966468156	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	399	3194	25.0	0	True	AATAAA	-20
PB.10200.2	chr6	+	5546	17	full-splice_match	NCOA7	ENST00000368357.7	5521	17	-26	1	-26	-1	multi-exon	FALSE	canonical	1	29927	junction_2	132295.78838339628	NA	6	NA	TRUE	NA	NA	NA	C	coding	942	2829	379	3207	25.0	20	True	AATAAA	-20
PB.10200.1	chr6	+	5388	16	novel_in_catalog	NCOA7	novel	5521	17	NA	NA	-90	-2	combination_of_known_junctions	FALSE	canonical	1	6394	junction_3	145503.31734026622	NA	2	NA	TRUE	NA	NA	NA	C	coding	838	2517	534	3050	25.0	-9916	False	AATAAA	-19
PB.1040.7	chr1	-	5415	27	full-splice_match	KDM5B	ENST00000367265.8	10341	27	996	3930	-1	23	multi-exon	FALSE	canonical	1	203318	junction_26	109707.08084915845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	170	4804	20.0	6	True	ATTAAA	-21
PB.1040.8	chr1	-	5446	28	full-splice_match	KDM5B	ENST00000367264.7	6520	28	61	1013	1	0	multi-exon	FALSE	canonical	1	16204	junction_22	141106.42776125346	NA	0	NA	TRUE	NA	NA	NA	C	coding	1580	4743	116	4858	75.0	0	True	NA	NA
PB.1040.9	chr1	-	5142	27	full-splice_match	KDM5B	ENST00000367265.8	10341	27	998	4201	1	2	multi-exon	FALSE	canonical	1	203318	junction_26	109707.08084915845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	168	4802	30.0	8	True	ATTAAA	-20
PB.8720.10	chr4	+	3142	10	full-splice_match	PI4K2B	ENST00000264864.7	3540	10	47	351	47	-351	multi-exon	FALSE	canonical	1	155094	junction_1	59408.46131052336	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	143	1588	50.0	-11	True	ATTAAA	-25
PB.8720.11	chr4	+	3296	10	full-splice_match	PI4K2B	ENST00000264864.7	3540	10	243	1	243	-1	multi-exon	FALSE	canonical	1	155094	junction_1	59408.46131052336	NA	6	NA	TRUE	NA	NA	NA	C	coding	385	1158	235	1392	15.0	-820	False	AATAAA	-19
PB.7535.1	chr21	-	2158	10	incomplete-splice_match	TMPRSS3	ENST00000398405.5	2754	12	6770	-1	-55	1	5prime_fragment	FALSE	canonical	1	35894	junction_3	12852.804980880368	NA	1	NA	TRUE	NA	NA	NA	A	coding	326	981	305	1285	0.0	6945	False	NA	NA
PB.10200.8	chr6	+	5343	16	novel_not_in_catalog	NCOA7	novel	5521	17	NA	NA	-446	-1	any annotated donor/acceptor	FALSE	canonical	1	344	junction_1	132803.64798577217	NA	1	NA	TRUE	NA	NA	NA	C	coding	942	2829	176	3004	25.0	14	True	AATAAA	-20
PB.11391.4	chr8	+	2091	12	novel_not_in_catalog	GPAA1	novel	878	6	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	16771	junction_10	331211.22504618566	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	121	2001	10.0	-23	True	AATAAA	-22
PB.6338.27	chr2	-	4655	19	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	2	81	any annotated donor/acceptor	FALSE	canonical	1	1688	junction_18	253912.53795260677	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	574	2853	35.0	1	True	GATAAA	-22
PB.2838.1	chr12	-	829	7	full-splice_match	WASHC3	ENST00000240079.10	916	7	83	4	-7	0	multi-exon	FALSE	canonical	1	268392	junction_5	116176.61393852992	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	80	664	30.0	120	False	AATAAA	-17
PB.2838.2	chr12	-	3725	6	full-splice_match	WASHC3	ENST00000541569.5	569	6	-30	-3126	4	3126	multi-exon	FALSE	canonical	1	268392	junction_4	119387.12263992293	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	47	550	70.0	-27	True	NA	NA
PB.2838.3	chr12	-	3331	5	novel_in_catalog	WASHC3	novel	886	8	NA	NA	0	2848	no_combination_of_known_junctions	FALSE	canonical	1	9583	junction_4	237224.38911753468	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	30	434	20.0	-10	True	AATAAA	-19
PB.900.7	chr1	+	3775	7	novel_not_in_catalog	POGK	novel	954	5	NA	NA	41	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	123309.90044148479	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	110	1885	50.0	19	True	AATAAA	-8
PB.1811.2	chr11	+	2371	10	incomplete-splice_match	WEE1	ENST00000299613.10	3436	11	1345	232	542	-232	5prime_fragment	FALSE	canonical	1	315698	junction_4	74139.51376631879	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	79	1221	25.0	242	False	ATTAAA	-17
PB.697.1	chr1	-	2640	2	novel_in_catalog	LINC01138	novel	1709	9	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	99	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	32	99	277	375	20.0	-2198216	True	NA	NA
PB.697.2	chr1	-	4577	1	novel_in_catalog	LINC01138	novel	1709	9	NA	NA	-12	3252	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	291	876	137	1012	80.0	-2198076	True	TTTAAA	-28
PB.1811.1	chr11	+	2796	11	full-splice_match	WEE1	ENST00000450114.6	2799	11	560	-557	-446	-220	multi-exon	TRUE	canonical	1	169715	junction_1	105931.37968911762	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	336	1634	20.0	-1549	False	ATTAAA	-29
PB.10490.5	chr7	+	2342	3	full-splice_match	EPDR1	ENST00000199448.8	2599	3	248	9	151	-9	multi-exon	FALSE	canonical	1	215676	junction_1	21381.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	132	806	40.0	-328	False	AATAAA	-20
PB.900.5	chr1	+	5997	5	incomplete-splice_match	POGK	ENST00000367876.8	5754	6	34	1884	34	-13	intron_retention	FALSE	canonical	1	99964	junction_1	92088.26595005197	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	117	1946	50.0	12	True	AATAAA	-8
PB.10509.9	chr7	+	1923	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	44	1401	35	201	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	136	1380	20.0	1	True	ACTAAA	-39
PB.900.4	chr1	+	3004	5	incomplete-splice_match	POGK	ENST00000367876.8	5754	6	22	4889	22	2247	3prime_fragment	FALSE	canonical	1	99964	junction_1	92088.26595005197	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	129	1958	75.0	0	True	NA	NA
PB.8484.2	chr3	+	3022	12	full-splice_match	KCNAB1	ENST00000497291.5	1546	12	-113	-1363	-113	0	multi-exon	FALSE	canonical	1	772	junction_1	21029.832555736488	NA	4	NA	TRUE	NA	NA	NA	C	coding	295	888	278	1165	35.0	NA	False	AATAAA	-23
PB.8484.1	chr3	+	2878	12	novel_in_catalog	KCNAB1	novel	567	10	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	1	637	junction_1	21065.3027955396	NA	4	NA	TRUE	NA	NA	NA	C	coding	295	888	135	1022	35.0	NA	False	AATAAA	-22
PB.7299.1	chr20	+	2498	17	full-splice_match	L3MBTL1	ENST00000648570.1	3871	17	-20	1393	1	-1	multi-exon	TRUE	canonical	1	9577	junction_7	15529.432362327148	NA	0	NA	TRUE	NA	NA	NA	A	coding	382	1149	1070	2218	30.0	-7	True	ATTAAA	-17
PB.11649.1	chr9	-	4638	8	full-splice_match	BICD2	ENST00000375512.3	4636	8	-31	29	-31	-29	multi-exon	FALSE	canonical	1	105321	junction_1	88302.8613563246	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	100	2574	75.0	-11	True	NA	NA
PB.900.1	chr1	+	3852	6	full-splice_match	POGK	ENST00000367876.8	5754	6	23	1879	23	-8	multi-exon	FALSE	canonical	1	99964	junction_1	84091.4743849815	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	128	1957	35.0	1	True	AATAAA	-13
PB.11222.12	chr8	-	3099	9	incomplete-splice_match	MMP16	ENST00000286614.10	11558	10	-49	13381	-49	-13381	3prime_fragment	FALSE	canonical	1	35917	junction_7	4947.265341516968	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	332	1876	80.0	9	True	NA	NA
PB.11222.13	chr8	-	2810	8	full-splice_match	MMP16	ENST00000544227.5	1512	8	-340	-958	-58	958	multi-exon	FALSE	canonical	1	916	junction_1	15043.128900000851	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	341	1714	80.0	0	True	NA	NA
PB.11222.10	chr8	-	2994	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-172	8736	-172	-8736	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	455	2278	25.0	-3	True	AATATA	-36
PB.11222.11	chr8	-	2652	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-164	9070	-164	-9070	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	447	2270	75.0	5	True	NA	NA
PB.11222.16	chr8	-	3172	1	novel_in_catalog	MMP16	novel	11558	10	NA	NA	93482	-44228	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.11222.14	chr8	-	5709	6	incomplete-splice_match	MMP16	ENST00000544227.5	1512	8	-322	42970	-40	-42970	3prime_fragment	FALSE	canonical	1	35917	junction_4	5603.175114165181	NA	3	NA	TRUE	NA	NA	NA	C	coding	376	1131	323	1453	85.0	18	True	NA	NA
PB.10509.8	chr7	+	2424	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	44	900	35	702	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	136	1380	50.0	1	True	TATAAA	-34
PB.549.10	chr1	-	1829	3	incomplete-splice_match	DNTTIP2	ENST00000436063.6	5897	7	20	9377	20	6	3prime_fragment	FALSE	canonical	1	555455	junction_2	171018.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1791	39	1829	65.0	-13	True	GATAAA	-40
PB.549.11	chr1	-	1588	2	incomplete-splice_match	DNTTIP2	ENST00000359208.6	2199	6	-22	6585	-20	376	3prime_fragment	FALSE	canonical	1	555455	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1551	37	1587	65.0	-11	True	NA	NA
PB.9167.8	chr5	+	3233	1	novel_in_catalog	SUB1	novel	908	5	NA	NA	5	-2877	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.5818.3	chr19	+	3413	6	full-splice_match	DDA1	ENST00000596582.1	502	6	-3	-2908	-3	-26	multi-exon	FALSE	canonical	1	6052	junction_5	171933.4698604085	NA	2	NA	TRUE	NA	NA	NA	C	coding	102	309	90	398	75.0	2	True	AATATA	-39
PB.5818.2	chr19	+	1062	5	full-splice_match	DDA1	ENST00000359866.8	4078	5	9	3007	9	-73	multi-exon	FALSE	canonical	1	334173	junction_2	74185.41389484862	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	116	424	10.0	-24	True	AATAAA	-18
PB.5818.1	chr19	+	4067	5	full-splice_match	DDA1	ENST00000359866.8	4078	5	-15	26	-2	-26	multi-exon	FALSE	canonical	1	334173	junction_2	74185.41389484862	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	140	448	75.0	-2702	False	AATATA	-39
PB.7052.30	chr2	-	6570	43	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	24	227	combination_of_known_junctions	FALSE	canonical	1	11890	junction_42	287455.57724246895	NA	2	1	TRUE	NA	NA	NA	C	coding	2038	6117	114	6230	15.0	23	True	AATAAA	-17
PB.9167.1	chr5	+	3587	6	full-splice_match	SUB1	ENST00000512913.5	684	6	-25	-2878	-25	-1	multi-exon	FALSE	canonical	1	33312	junction_2	1428298.9928044616	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	210	593	5.0	0	True	AATAAA	-13
PB.9167.2	chr5	+	3460	5	full-splice_match	SUB1	ENST00000506237.5	908	5	204	-2756	-12	0	multi-exon	FALSE	canonical	1	38342	junction_1	1433757.9998140158	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	82	465	5.0	-1	True	AATAAA	-14
PB.9167.3	chr5	+	3435	5	full-splice_match	SUB1	ENST00000265073.8	3507	5	72	0	0	0	multi-exon	FALSE	canonical	1	680327	junction_2	1111900.3233333237	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	57	440	5.0	-3	True	AATAAA	-14
PB.9167.4	chr5	+	1326	5	full-splice_match	SUB1	ENST00000265073.8	3507	5	58	2123	-2	-32	multi-exon	FALSE	canonical	1	680327	junction_2	1111900.3233333237	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	71	454	25.0	-17	True	AATAAA	-15
PB.9167.5	chr5	+	687	5	full-splice_match	SUB1	ENST00000265073.8	3507	5	72	2748	0	8	multi-exon	FALSE	canonical	1	680327	junction_2	1111900.3233333237	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	57	440	10.0	-3	True	AATAAA	-19
PB.9167.6	chr5	+	2408	1	novel_in_catalog	SUB1	novel	908	5	NA	NA	1	-3706	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-2	True	AAAAAG	-3
PB.9167.7	chr5	+	3137	5	full-splice_match	SUB1	ENST00000265073.8	3507	5	75	295	3	-295	multi-exon	FALSE	canonical	1	680327	junction_2	1111900.3233333237	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	54	437	50.0	0	True	NA	NA
PB.8025.4	chr3	+	4070	20	novel_not_in_catalog	WDR48	novel	3707	19	NA	NA	0	3	intron_retention	FALSE	canonical	1	7257	junction_15	100109.90576010148	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	29	1510	40.0	-18	True	AATAAA	-20
PB.10587.2	chr7	+	5092	13	full-splice_match	POM121	ENST00000434423.4	3750	13	-8	-1334	-8	-731	multi-exon	FALSE	canonical	1	1630	junction_9	165370.92791835082	NA	2	NA	TRUE	NA	NA	NA	C	coding	1249	3750	9	3758	75.0	19	True	NA	NA
PB.10587.1	chr7	+	5251	13	full-splice_match	POM121	ENST00000358357.7	5320	13	65	4	65	-4	multi-exon	FALSE	canonical	1	1630	junction_9	159597.9253055419	NA	2	1	TRUE	NA	NA	NA	C	coding	984	2955	236	3190	20.0	NA	False	AATAAA	-15
PB.8025.5	chr3	+	1886	18	incomplete-splice_match	WDR48	ENST00000302313.9	3707	19	0	2402	0	-1092	3prime_fragment	FALSE	canonical	1	228842	junction_17	38652.99673069316	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1857	29	1885	60.0	-18	True	NA	NA
PB.900.8	chr1	+	3835	6	novel_in_catalog	POGK	novel	954	5	NA	NA	200	-13	combination_of_known_junctions	FALSE	canonical	1	26014	junction_1	112467.21467272141	NA	3	NA	TRUE	NA	NA	NA	C	coding	609	1830	116	1945	50.0	178	False	AATAAA	-8
PB.2420.3	chr12	-	2243	2	full-splice_match	LPAR5	ENST00000329858.8	3171	2	488	440	1	-440	multi-exon	FALSE	canonical	1	45111	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	270	1388	25.0	-1	True	GATAAA	-28
PB.2420.2	chr12	-	2393	2	full-splice_match	LPAR5	ENST00000329858.8	3171	2	479	299	-8	-299	multi-exon	FALSE	canonical	1	45111	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	279	1397	35.0	-10	True	NA	NA
PB.2420.1	chr12	-	2695	2	full-splice_match	LPAR5	ENST00000431922.1	2695	2	0	0	0	0	multi-exon	FALSE	canonical	1	9014	junction_1	0.0	NA	7	1	TRUE	NA	NA	NA	C	coding	372	1119	282	1400	10.0	-1	True	AATAAA	-20
PB.8025.7	chr3	+	3630	20	novel_in_catalog	WDR48	novel	3707	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	12085	junction_19	78142.11606076644	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	18	2051	70.0	-7	True	NA	NA
PB.7312.8	chr20	+	1262	10	incomplete-splice_match	STK4	ENST00000372801.5	2038	12	-19	50587	-12	29764	3prime_fragment	FALSE	canonical	1	259752	junction_1	101132.34389540162	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1194	67	1260	70.0	-9	True	NA	NA
PB.7312.9	chr20	+	5260	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-11	-905	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	147692.67903615275	NA	3	NA	TRUE	NA	NA	NA	C	coding	487	1464	66	1529	85.0	-8	True	NA	NA
PB.7312.5	chr20	+	5599	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	7	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	84	1547	40.0	-26	True	AATAAA	-40
PB.7312.6	chr20	+	5122	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	14	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	77	1540	40.0	-19	True	AATAAA	-40
PB.7312.7	chr20	+	1911	9	novel_in_catalog	STK4	novel	6342	11	NA	NA	-13	29766	intron_retention	FALSE	canonical	1	259752	junction_1	69518.49247670993	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	68	1081	75.0	-10	True	NA	NA
PB.7312.1	chr20	+	4949	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	2	1	TRUE	NA	NA	NA	C	coding	487	1464	110	1573	45.0	-3913	False	AATAAA	-25
PB.7312.2	chr20	+	4557	11	full-splice_match	STK4	ENST00000372806.7	6342	11	-2	1787	-2	-1776	multi-exon	FALSE	canonical	1	259752	junction_1	96041.26906288776	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	98	1561	70.0	-3901	False	AAGAAA	-22
PB.7312.3	chr20	+	5297	11	full-splice_match	STK4	ENST00000372806.7	6342	11	38	1007	-3	-996	multi-exon	FALSE	canonical	1	259752	junction_1	96041.26906288776	NA	3	NA	TRUE	NA	NA	NA	C	coding	487	1464	58	1521	55.0	0	True	NA	NA
PB.11152.36	chr8	-	2794	13	full-splice_match	ASPH	ENST00000445642.6	3717	13	96	827	2	0	multi-exon	FALSE	canonical	1	284930	junction_6	600191.3501133757	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	174	1058	25.0	47	True	AATAAA	-17
PB.3378.1	chr14	-	1259	6	full-splice_match	EAPP	ENST00000250454.7	1321	6	-21	83	-20	0	multi-exon	FALSE	canonical	1	489267	junction_5	19126.767536622596	NA	0	NA	TRUE	NA	NA	NA	A	coding	285	858	104	961	15.0	-31	True	ATTAAA	-36
PB.11649.2	chr9	-	6427	7	full-splice_match	BICD2	ENST00000356884.10	6427	7	-29	29	-29	-29	multi-exon	FALSE	canonical	1	258441	junction_3	52144.914109357036	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	98	2665	75.0	-9	True	NA	NA
PB.6347.1	chr2	-	3856	4	full-splice_match	WDCP	ENST00000295148.8	3817	4	-47	8	-39	-1	multi-exon	FALSE	canonical	1	78924	junction_1	10708.146151412018	NA	2	NA	TRUE	NA	NA	NA	C	coding	721	2166	106	2271	10.0	-10	True	AATAAA	-14
PB.6347.2	chr2	-	3736	3	full-splice_match	WDCP	ENST00000406895.3	3700	3	-37	1	-37	-1	multi-exon	FALSE	canonical	1	3713	junction_1	50201.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	104	1972	10.0	-8	True	AATAAA	-14
PB.11756.4	chr9	-	2388	10	full-splice_match	PSMD5	ENST00000210313.7	3443	10	41	1014	8	729	multi-exon	FALSE	canonical	1	169916	junction_9	74455.77407950157	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	35	1549	70.0	-22	True	NA	NA
PB.11756.5	chr9	-	2151	10	full-splice_match	PSMD5	ENST00000210313.7	3443	10	56	1236	-17	507	multi-exon	FALSE	canonical	1	169916	junction_9	74455.77407950157	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	20	1534	75.0	-7	True	NA	NA
PB.1240.8	chr1	-	5935	14	full-splice_match	HNRNPU	ENST00000640218.1	6858	14	-7	930	-6	-930	multi-exon	FALSE	canonical	1	663885	junction_13	1717621.40964347	NA	1	NA	TRUE	NA	NA	NA	C	coding	825	2478	238	2715	30.0	-3	True	AATAAA	-16
PB.11756.1	chr9	-	3385	10	full-splice_match	PSMD5	ENST00000210313.7	3443	10	56	2	-17	-2	multi-exon	FALSE	canonical	1	169916	junction_9	74455.77407950157	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	20	1534	25.0	-7	True	AATAAA	-33
PB.11756.2	chr9	-	3087	10	full-splice_match	PSMD5	ENST00000210313.7	3443	10	56	300	-17	-300	multi-exon	FALSE	canonical	1	169916	junction_9	74455.77407950157	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	20	1534	25.0	-7	True	NA	NA
PB.11756.3	chr9	-	3008	9	novel_in_catalog	PSMD5	novel	569	4	NA	NA	-10	-302	no_combination_of_known_junctions	FALSE	canonical	1	1347	junction_2	103327.54519094848	NA	5	1	TRUE	NA	NA	NA	C	coding	336	1011	53	1063	30.0	-40	True	NA	NA
PB.9627.1	chr5	+	5134	7	novel_in_catalog	CPEB4	novel	9483	10	NA	NA	-15	0	no_combination_of_known_junctions	FALSE	canonical	1	8567	junction_1	92291.19808699707	NA	3	NA	TRUE	NA	NA	NA	A	coding	295	888	75	962	30.0	0	True	AATAAA	-14
PB.7364.3	chr20	+	3781	3	intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	766	junction_2	2605.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-3	True	AATAAA	-22
PB.7364.2	chr20	+	3920	4	novel_not_in_catalog	AC005220.1	novel	884	3	NA	NA	-34770	-2300	any annotated donor/acceptor	FALSE	canonical	1	566	junction_2	2515.914280468766	NA	0	NA	FALSE	NA	NA	NA	B	coding	102	309	2278	2586	85.0	0	True	NA	NA
PB.7364.1	chr20	+	3617	2	novel_not_in_catalog	AC005220.1	novel	884	3	NA	NA	-34851	-2300	any annotated donor/acceptor	FALSE	canonical	1	501	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	102	309	1975	2283	85.0	0	True	NA	NA
PB.9732.3	chr6	+	1496	10	full-splice_match	PAK1IP1	ENST00000379568.3	1800	10	257	47	257	-47	multi-exon	FALSE	canonical	1	138937	junction_1	159353.78298693418	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	35	1213	60.0	-20	True	AATAAA	-11
PB.9732.4	chr6	+	1177	10	novel_not_in_catalog	PAK1IP1	novel	1800	10	NA	NA	255	-371	any annotated donor/acceptor	FALSE	canonical	1	36298	junction_1	186070.8245453533	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1140	37	1176	70.0	-22	True	NA	NA
PB.11649.5	chr9	-	4050	8	full-splice_match	BICD2	ENST00000375512.3	4636	8	84	502	84	-502	multi-exon	FALSE	canonical	1	105321	junction_1	88302.8613563246	NA	31	NA	TRUE	NA	NA	NA	C	coding	810	2433	27	2459	60.0	104	False	AAGAAA	-16
PB.1068.1	chr1	-	3399	4	full-splice_match	RAB29	ENST00000446390.6	1441	4	-227	-1731	0	-1	multi-exon	FALSE	canonical	1	11489	junction_3	106981.90955795595	NA	3	NA	TRUE	NA	NA	NA	C	coding	179	540	505	1044	15.0	1	True	AATAAA	-18
PB.1068.6	chr1	-	2468	5	full-splice_match	RAB29	ENST00000437324.6	1306	5	-9	-1153	0	-564	multi-exon	FALSE	canonical	1	10429	junction_4	97599.68129174398	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	281	676	90.0	1	True	NA	NA
PB.1068.7	chr1	-	1599	5	novel_not_in_catalog	RAB29	novel	3272	6	NA	NA	-22	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	102112.70837015097	NA	19	1	TRUE	NA	NA	NA	C	coding	131	396	309	704	90.0	-21	True	NA	NA
PB.1068.4	chr1	-	2743	6	novel_not_in_catalog	RAB29	novel	3272	6	NA	NA	-16	-564	any annotated donor/acceptor	FALSE	canonical	1	4372	junction_5	90028.00865641759	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	340	951	90.0	-15	True	NA	NA
PB.1068.5	chr1	-	2622	6	full-splice_match	RAB29	ENST00000235932.8	1723	6	-12	-887	-1	-564	multi-exon	FALSE	canonical	1	26729	junction_5	81675.9488843564	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	219	830	90.0	0	True	NA	NA
PB.1068.9	chr1	-	1825	6	novel_not_in_catalog	RAB29	novel	3272	6	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	4372	junction_5	90028.00865641759	NA	2	1	TRUE	NA	NA	NA	C	coding	203	612	319	930	90.0	6	True	NA	NA
PB.252.1	chr1	+	4418	3	novel_in_catalog	CCDC28B	novel	1089	6	NA	NA	0	-7	intron_retention	FALSE	canonical	1	287926	junction_2	51167.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	210	633	3208	3840	40.0	-20	True	ATTAAA	-5
PB.11649.4	chr9	-	4462	8	full-splice_match	BICD2	ENST00000375512.3	4636	8	-35	209	-35	-209	multi-exon	FALSE	canonical	1	105321	junction_1	88302.8613563246	NA	1	NA	TRUE	NA	NA	NA	C	coding	824	2475	104	2578	75.0	-15	True	TTTAAA	-44
PB.9583.5	chr5	+	3801	19	novel_in_catalog	LARP1	novel	6595	19	NA	NA	9	940	combination_of_known_junctions	FALSE	canonical	1	516035	junction_6	250316.47470608872	NA	0	NA	TRUE	NA	NA	NA	B	coding	891	2676	362	3037	80.0	-1191	False	NA	NA
PB.8217.11	chr3	-	1984	11	full-splice_match	SUCLG2	ENST00000307227.9	2352	11	9	359	2	-359	multi-exon	FALSE	canonical	1	28717	junction_3	128028.65870972014	NA	3	NA	TRUE	NA	NA	NA	C	coding	432	1299	20	1318	60.0	-4	True	AATATA	-17
PB.1240.23	chr1	-	2985	12	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	2	35	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	1903572.3562518791	NA	1	NA	TRUE	NA	NA	NA	C	coding	653	1962	229	2190	25.0	6	True	ATTAAA	-19
PB.1240.22	chr1	-	3110	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	1	35	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	1904400.8788093852	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	147	2315	25.0	5	True	ATTAAA	-19
PB.9235.18	chr5	+	4565	13	full-splice_match	GPBP1	ENST00000424459.7	4683	13	114	4	13	-4	multi-exon	FALSE	canonical	1	215850	junction_6	294555.18629351904	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1161	2642	20.0	-23	True	TATAAA	-17
PB.9235.19	chr5	+	3762	12	full-splice_match	GPBP1	ENST00000506184.6	2857	12	-31	-874	-31	369	multi-exon	FALSE	canonical	1	285549	junction_1	250616.51210940647	NA	1	1	TRUE	NA	NA	NA	C	coding	473	1422	1137	2558	50.0	1	True	AATATA	-23
PB.1240.27	chr1	-	2037	11	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	7	29	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1692742.8272906786	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1791	247	2037	30.0	16	False	ATTAAA	-13
PB.9235.14	chr5	+	2950	13	novel_in_catalog	GPBP1	novel	4683	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	14343	junction_4	349569.8363767961	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	1178	2620	35.0	-40	True	AATAAA	-20
PB.9235.15	chr5	+	3476	13	full-splice_match	GPBP1	ENST00000424459.7	4683	13	111	1096	10	-4	multi-exon	FALSE	canonical	1	215850	junction_6	294555.18629351904	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1164	2645	20.0	-26	True	AATAAA	-13
PB.9235.16	chr5	+	2760	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	7133	junction_8	407082.5443376438	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	1885	2430	35.0	-26	True	AATAAA	-20
PB.9235.17	chr5	+	1825	7	incomplete-splice_match	GPBP1	ENST00000506184.6	2857	12	-57	16598	11	-2995	3prime_fragment	FALSE	canonical	1	285549	junction_1	229510.1417224786	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	663	1163	1825	40.0	-25	True	TATAAA	-37
PB.9235.10	chr5	+	3533	14	novel_in_catalog	GPBP1	novel	4683	13	NA	NA	-26	-4	combination_of_known_junctions	FALSE	canonical	1	14343	junction_4	361447.38184927043	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	1200	2702	20.0	-62	True	AATAAA	-13
PB.9235.11	chr5	+	3023	14	novel_in_catalog	GPBP1	novel	4683	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	14343	junction_4	361447.38184927043	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	1191	2693	35.0	-53	True	AATAAA	-20
PB.9235.12	chr5	+	2817	11	full-splice_match	GPBP1	ENST00000514387.6	3310	11	-12	505	-12	0	multi-exon	FALSE	canonical	1	35922	junction_2	315986.3333908604	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	1579	2487	35.0	-48	True	AATAAA	-20
PB.7289.5	chr20	+	8472	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	19	-173	intron_retention	FALSE	canonical	1	102794	junction_1	51383.9365020537	NA	62	2	TRUE	NA	NA	NA	C	coding	1495	4488	266	4753	30.0	-12	True	AGTAAA	-11
PB.224.2	chr1	+	2311	9	novel_in_catalog	SESN2	novel	3453	10	NA	NA	-46	-1043	no_combination_of_known_junctions	TRUE	canonical	1	1552	junction_8	88040.1972339908	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	368	1588	80.0	-1	True	NA	NA
PB.224.3	chr1	+	3478	10	full-splice_match	SESN2	ENST00000253063.3	3453	10	-23	-2	-23	2	multi-exon	FALSE	canonical	1	107558	junction_1	50258.845829353915	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	345	1787	5.0	-20	True	AATAAA	-27
PB.777.11	chr1	+	3349	25	full-splice_match	UBAP2L	ENST00000613315.4	3451	25	99	3	1	-3	multi-exon	FALSE	canonical	1	11481	junction_5	378306.26449811907	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	72	2999	10.0	-10	True	AATAAA	-20
PB.8217.12	chr3	-	2251	12	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	3	-654	any annotated donor/acceptor	FALSE	canonical	1	9714	junction_1	92810.67165431796	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	19	1245	65.0	-3	True	NA	NA
PB.777.17	chr1	+	4047	28	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	450806.1555193114	NA	2	NA	TRUE	NA	NA	NA	C	coding	857	2574	917	3490	10.0	-3	True	TATAAA	-19
PB.24.2	chr1	+	3303	19	incomplete-splice_match	MIB2	ENST00000355826.9	3290	20	855	6	2	0	5prime_fragment	FALSE	canonical	1	78825	junction_1	82126.4839560199	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	362	3229	5.0	411	False	TATAAA	-16
PB.2190.1	chr11	-	3375	2	full-splice_match	KCTD21	ENST00000340067.3	3585	2	206	4	2	-4	multi-exon	FALSE	canonical	1	47317	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	260	783	74	856	15.0	8	True	NA	NA
PB.777.14	chr1	+	3528	26	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	39010	junction_10	424738.52703871543	NA	10	2	TRUE	NA	NA	NA	C	coding	753	2262	918	3179	10.0	-6	True	AATAAA	-19
PB.119.1	chr1	+	3490	4	full-splice_match	SZRD1	ENST00000401088.8	3636	4	148	-2	-4	-1	multi-exon	FALSE	canonical	1	281822	junction_2	543529.7996426283	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	28	486	20.0	-13	True	TATAAA	-32
PB.7102.1	chr2	+	2139	8	incomplete-splice_match	RNPEPL1	ENST00000270357.9	5658	11	5247	2639	-36	6	5prime_fragment	TRUE	canonical	1	490569	junction_5	124718.3958116714	NA	3	NA	TRUE	NA	NA	NA	A	coding	416	1251	48	1298	0.0	4902	False	ATTAAA	-22
PB.119.3	chr1	+	1655	3	full-splice_match	SZRD1	ENST00000401089.3	3447	3	7	1785	-3	954	multi-exon	FALSE	canonical	1	521865	junction_1	475749.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	34	435	40.0	-12	True	AATAAA	-6
PB.119.2	chr1	+	3420	3	full-splice_match	SZRD1	ENST00000401089.3	3447	3	17	10	-1	-7	multi-exon	FALSE	canonical	1	521865	junction_1	475749.5	NA	29	NA	TRUE	NA	NA	NA	C	coding	133	402	24	425	25.0	-2	True	TATAAA	-23
PB.119.5	chr1	+	3010	3	novel_not_in_catalog	SZRD1	novel	490	3	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	271198.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-12	True	TATAAA	-32
PB.119.4	chr1	+	1727	4	full-splice_match	SZRD1	ENST00000401088.8	3636	4	148	1761	-4	975	multi-exon	FALSE	canonical	1	281822	junction_2	543529.7996426283	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	28	486	40.0	-13	True	AATAAA	-27
PB.119.7	chr1	+	4983	2	incomplete-splice_match	SZRD1	ENST00000401089.3	3447	3	18	1	0	-1	intron_retention	FALSE	canonical	1	521865	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	23	325	20.0	-1	True	TATAAA	-32
PB.8168.2	chr3	+	3198	13	full-splice_match	NISCH	ENST00000488380.5	3168	13	-28	-2	-28	2	multi-exon	FALSE	canonical	1	255855	junction_1	117104.6774694428	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	54	1805	5.0	-41	False	AATAAA	-18
PB.9134.18	chr5	-	2817	17	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	0	-6	no_combination_of_known_junctions	FALSE	canonical	1	288	junction_4	231333.47898467342	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	64	1728	45.0	1	True	AATAAA	-7
PB.1360.1	chr10	-	4033	14	full-splice_match	EPC1	ENST00000319778.10	4057	14	17	7	-16	-7	multi-exon	FALSE	canonical	1	161576	junction_3	43661.44746155205	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	407	2728	30.0	-9	True	AATAAA	-22
PB.9134.17	chr5	-	2846	17	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-21	-6	combination_of_known_junctions	FALSE	canonical	1	8238	junction_4	282549.54335675255	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	708	1757	45.0	-20	True	AATAAA	-7
PB.1360.3	chr10	-	3254	14	full-splice_match	EPC1	ENST00000319778.10	4057	14	60	743	27	437	multi-exon	FALSE	canonical	1	161576	junction_3	43661.44746155205	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	364	2685	60.0	-1	True	NA	NA
PB.1360.2	chr10	-	3398	15	full-splice_match	EPC1	ENST00000263062.8	2913	15	-15	-470	-15	470	multi-exon	FALSE	canonical	1	19764	junction_4	80071.32112637752	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	406	2796	100.0	-8	True	NA	NA
PB.1360.5	chr10	-	2845	14	full-splice_match	EPC1	ENST00000319778.10	4057	14	73	1139	-24	41	multi-exon	FALSE	canonical	1	161576	junction_3	43661.44746155205	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	351	2672	60.0	12	True	NA	NA
PB.1360.4	chr10	-	3192	14	full-splice_match	EPC1	ENST00000375110.6	3909	14	7	710	7	470	multi-exon	FALSE	canonical	1	35707	junction_13	65558.80090476797	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	299	2590	100.0	-26	True	NA	NA
PB.9134.10	chr5	-	3094	20	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	-24	-6	any annotated donor/acceptor	FALSE	canonical	1	4859	junction_12	264091.4677113891	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	88	2415	45.0	-23	True	AATAAA	-7
PB.1360.6	chr10	-	2046	1	novel_in_catalog	EPC1	novel	4057	14	NA	NA	27	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	120	363	244	606	15.0	-1	True	ATTAAA	-15
PB.7070.1	chr2	-	1133	5	full-splice_match	PDE6D	ENST00000287600.8	1175	5	30	12	3	-12	multi-exon	FALSE	canonical	1	252443	junction_4	89969.99871172334	NA	0	NA	TRUE	NA	NA	NA	A	coding	150	453	166	618	15.0	-1	True	ATTAAA	-28
PB.1517.20	chr10	-	2148	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-90	-605	any annotated donor/acceptor	FALSE	canonical	1	132168	junction_6	132309.85500243522	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	98	1183	60.0	-58	True	AATATA	-12
PB.1517.21	chr10	-	1505	10	full-splice_match	ATAD1	ENST00000308448.11	4640	10	-14	3149	-14	-1544	multi-exon	FALSE	canonical	1	102402	junction_9	147357.84445883957	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	394	1479	10.0	18	True	AGTAAA	-20
PB.1517.22	chr10	-	4864	1	novel_in_catalog	ATAD1	novel	671	5	NA	NA	-71	-28816	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-39	True	NA	NA
PB.10036.1	chr6	+	4574	7	incomplete-splice_match	FBXO9	ENST00000323557.11	3418	13	-59	13454	-48	5051	3prime_fragment	FALSE	non_canonical	0	0	junction_3	249159.60768127904	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	391	1050	90.0	-4	True	NA	NA
PB.11019.8	chr8	+	4906	11	novel_not_in_catalog	SLC39A14	novel	4641	9	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	7604	junction_2	243680.8025661644	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	445	1923	30.0	-1	True	AATAAA	-21
PB.10416.5	chr7	-	4284	26	full-splice_match	SNX13	ENST00000428135.7	6357	26	-9	2082	-2	-1	multi-exon	FALSE	canonical	1	157770	junction_25	35536.346568638706	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	209	3082	15.0	-13	True	AATAAA	-16
PB.10416.6	chr7	-	4322	26	novel_in_catalog	SNX13	novel	6357	26	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	21313	junction_9	51725.351136385725	NA	10	2	TRUE	NA	NA	NA	C	coding	968	2907	214	3120	15.0	-18	True	AATAAA	-16
PB.10416.7	chr7	-	4137	26	full-splice_match	SNX13	ENST00000428135.7	6357	26	-14	2234	-7	-153	multi-exon	FALSE	canonical	1	157770	junction_25	35536.346568638706	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	214	3087	60.0	-18	True	AATAAA	-6
PB.10416.1	chr7	-	6388	26	full-splice_match	SNX13	ENST00000428135.7	6357	26	-14	-17	-7	17	multi-exon	TRUE	canonical	1	157770	junction_25	35536.346568638706	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	214	3087	30.0	-18	True	AATAAA	-31
PB.10416.3	chr7	-	5743	26	full-splice_match	SNX13	ENST00000428135.7	6357	26	-19	633	-12	-633	multi-exon	FALSE	canonical	1	157770	junction_25	35536.346568638706	NA	2	NA	TRUE	NA	NA	NA	C	coding	957	2874	219	3092	90.0	-23	False	NA	NA
PB.11019.1	chr8	+	4607	9	full-splice_match	SLC39A14	ENST00000381237.5	4641	9	-27	61	0	-5	multi-exon	FALSE	canonical	1	280425	junction_1	123955.96053336846	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	147	1625	30.0	0	True	AATAAA	-20
PB.11019.2	chr8	+	4432	8	novel_in_catalog	SLC39A14	novel	4641	9	NA	NA	12	-12	no_combination_of_known_junctions	FALSE	canonical	1	3816	junction_7	182966.69735060463	NA	2	NA	TRUE	NA	NA	NA	C	coding	384	1155	164	1318	30.0	-17	True	AATAAA	-13
PB.11019.3	chr8	+	4510	9	novel_not_in_catalog	SLC39A14	novel	4641	9	NA	NA	-14	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	195308.38587214932	NA	15	2	TRUE	NA	NA	NA	C	coding	315	948	589	1536	30.0	-14	True	AATAAA	-12
PB.10416.8	chr7	-	3682	26	full-splice_match	SNX13	ENST00000428135.7	6357	26	-11	2686	-4	-27	multi-exon	FALSE	canonical	1	157770	junction_25	35536.346568638706	NA	24	4	TRUE	NA	NA	NA	C	coding	957	2874	211	3084	70.0	-15	True	AATAAA	-8
PB.10416.9	chr7	-	3537	25	novel_in_catalog	SNX13	novel	6357	26	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	12527	junction_5	54333.11217565867	NA	11	3	TRUE	NA	NA	NA	C	coding	903	2712	203	2914	25.0	-7	True	AATAAA	-33
PB.11019.6	chr8	+	4794	10	novel_not_in_catalog	SLC39A14	novel	4641	9	NA	NA	-10	-7	any annotated donor/acceptor	FALSE	canonical	1	2835	junction_1	227032.67244459185	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	336	1814	25.0	-10	True	AATAAA	-18
PB.11019.7	chr8	+	4705	10	novel_in_catalog	SLC39A14	novel	4641	9	NA	NA	-10	-5	no_combination_of_known_junctions	FALSE	canonical	1	4605	junction_1	229737.2630252241	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	245	1723	30.0	-10	True	AATAAA	-20
PB.875.7	chr1	+	2927	9	novel_in_catalog	TOMM40L	novel	2807	9	NA	NA	0	-23	intron_retention	FALSE	canonical	1	23972	junction_1	62506.162965017895	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	713	1438	70.0	3	True	NA	NA
PB.10092.40	chr6	-	2033	10	incomplete-splice_match	SYNCRIP	ENST00000616122.4	6764	11	36	6752	36	-431	3prime_fragment	FALSE	canonical	1	75283	junction_6	353894.3074365914	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	237	1814	50.0	-1	True	AATAAA	-17
PB.10965.2	chr8	+	3436	12	incomplete-splice_match	ARHGEF10	ENST00000398564.5	5480	29	83193	-7	5069	1	5prime_fragment	FALSE	canonical	1	95525	junction_1	24339.013169860536	NA	2	NA	TRUE	NA	NA	NA	A	coding	681	2046	14	2059	20.0	NA	False	AATAAA	-21
PB.10965.1	chr8	+	2593	7	novel_not_in_catalog	KBTBD11-OT1	novel	6169	30	NA	NA	52672	13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	51235.62976961334	NA	0	NA	TRUE	NA	NA	NA	A	coding	344	1035	182	1216	20.0	-20	True	AATAAA	-21
PB.7579.4	chr21	+	3625	28	incomplete-splice_match	DIP2A	ENST00000417564.2	6967	38	-216	14919	-4	-3805	3prime_fragment	FALSE	canonical	1	110187	junction_5	37487.570030809075	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3387	238	3624	5.0	0	True	NA	NA
PB.1049.6	chr1	+	8618	20	novel_in_catalog	ATP2B4	novel	8968	21	NA	NA	12	-2	intron_retention	FALSE	canonical	1	18193	junction_18	123363.75071748537	NA	6	NA	TRUE	NA	NA	NA	C	coding	1169	3510	886	4395	20.0	4	True	AATAAA	-16
PB.7579.3	chr21	+	7051	38	full-splice_match	DIP2A	ENST00000417564.2	6967	38	-216	132	-4	12	multi-exon	TRUE	canonical	1	110187	junction_5	40626.096867920925	NA	7	NA	TRUE	NA	NA	NA	C	coding	1571	4716	238	4953	35.0	0	True	AATAAA	-30
PB.11257.1	chr8	+	1815	7	full-splice_match	LAPTM4B	ENST00000619747.1	2758	7	943	0	151	0	multi-exon	TRUE	canonical	1	690893	junction_4	489386.5067828688	NA	0	NA	TRUE	NA	NA	NA	A	coding	226	681	11	691	25.0	-7093	False	ATTAAA	-20
PB.7579.2	chr21	+	2790	21	full-splice_match	DIP2A	ENST00000435722.7	2760	21	-33	3	-33	-3	multi-exon	FALSE	canonical	1	110187	junction_5	39121.76865429271	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	109	2634	45.0	-5822	False	AGTAAA	-18
PB.9220.9	chr5	+	3155	26	novel_in_catalog	PARP8	novel	597	7	NA	NA	-57	-6	combination_of_known_junctions	FALSE	canonical	1	2911	junction_2	78831.21423927454	NA	3	1	TRUE	NA	NA	NA	C	coding	607	1824	1065	2888	35.0	-6	True	AATAAA	-8
PB.3006.10	chr12	+	4235	5	novel_in_catalog	ZNF664	novel	592	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	117976	junction_1	174673.1461251271	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	954	1739	15.0	-31	True	AATAAA	-17
PB.7579.1	chr21	+	2866	20	incomplete-splice_match	DIP2A	ENST00000435722.7	2760	21	-54	901	26	0	3prime_fragment	FALSE	canonical	1	110187	junction_5	37642.24523184268	NA	2	NA	TRUE	NA	NA	NA	C	coding	812	2439	130	2568	20.0	-5843	False	AATAAA	-14
PB.2934.5	chr12	+	4637	11	full-splice_match	FBXW8	ENST00000455858.2	4648	11	11	0	11	0	multi-exon	FALSE	canonical	1	20757	junction_1	30164.83190007861	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	63	1661	20.0	-4	True	ATTAAA	-14
PB.2934.4	chr12	+	2291	11	full-splice_match	FBXW8	ENST00000455858.2	4648	11	-13	2370	-4	142	multi-exon	FALSE	canonical	1	20757	junction_1	30164.83190007861	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	87	1685	25.0	-28	True	NA	NA
PB.2973.1	chr12	-	3159	5	novel_not_in_catalog	RHOF	novel	3009	5	NA	NA	-316	939	intron_retention	TRUE	non_canonical	0	0	junction_1	211404.84638011493	NA	3	NA	TRUE	NA	NA	NA	C	coding	170	513	44	556	80.0	11	True	NA	NA
PB.2934.1	chr12	+	3456	11	full-splice_match	FBXW8	ENST00000455858.2	4648	11	-34	1226	-25	-1226	multi-exon	FALSE	canonical	1	20757	junction_1	30164.83190007861	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	108	1706	85.0	-49	False	NA	NA
PB.2934.3	chr12	+	2929	11	full-splice_match	FBXW8	ENST00000455858.2	4648	11	-14	1733	-5	779	multi-exon	FALSE	canonical	1	20757	junction_1	30164.83190007861	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	88	1686	40.0	-29	True	AATAAA	-20
PB.2934.2	chr12	+	2585	11	full-splice_match	FBXW8	ENST00000455858.2	4648	11	-17	2080	-8	432	multi-exon	FALSE	canonical	1	20757	junction_1	30164.83190007861	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	91	1689	35.0	-32	True	NA	NA
PB.2743.1	chr12	+	1815	4	full-splice_match	IFNG-AS1	ENST00000538665.5	1791	4	-35	11	-35	-11	multi-exon	FALSE	canonical	1	12982	junction_2	2763.641197164832	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	2	True	AATAAA	-22
PB.10184.4	chr6	+	2434	6	novel_not_in_catalog	NUS1	novel	4676	5	NA	NA	-18	-2055	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	17173.89871869518	NA	1	1	TRUE	NA	NA	NA	C	coding	145	438	427	864	30.0	15	False	AATAAA	-13
PB.8473.13	chr3	+	3420	10	full-splice_match	MBNL1	ENST00000324210.9	5465	10	-34	2079	9	525	multi-exon	FALSE	canonical	1	530746	junction_1	234718.33746102825	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	954	2102	80.0	-3	True	NA	NA
PB.8473.12	chr3	+	5620	11	full-splice_match	MBNL1	ENST00000282488.11	6458	11	841	-3	-25	2	multi-exon	FALSE	canonical	1	174701	junction_5	331943.2298471532	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	1002	2204	25.0	-1159	False	AATAAA	-40
PB.8473.15	chr3	+	3546	11	full-splice_match	MBNL1	ENST00000282488.11	6458	11	820	2092	-46	528	multi-exon	FALSE	canonical	1	174701	junction_5	331943.2298471532	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	1023	2225	65.0	-1180	False	NA	NA
PB.5260.1	chr17	-	1384	9	full-splice_match	MRPL38	ENST00000309352.3	1888	9	504	0	-8	0	multi-exon	FALSE	canonical	1	559384	junction_7	135849.80982268386	NA	0	NA	TRUE	NA	NA	NA	A	coding	380	1143	35	1177	20.0	-26	True	AATAAA	-19
PB.8473.17	chr3	+	4564	8	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	112294	junction_5	417007.6747265167	NA	3	NA	TRUE	NA	NA	NA	C	coding	278	837	315	1151	25.0	-1159	False	AATAAA	-37
PB.8473.16	chr3	+	6844	1	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-42	-24403	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1176	False	NA	NA
PB.8473.19	chr3	+	5039	11	full-splice_match	MBNL1	ENST00000282488.11	6458	11	841	578	-25	-2	multi-exon	FALSE	canonical	1	174701	junction_5	331943.2298471532	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	1002	2204	75.0	-1159	False	TTTAAA	-7
PB.8473.18	chr3	+	5467	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	1	47551	junction_7	348189.0750223756	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	1002	2030	25.0	-1159	False	AATAAA	-36
PB.2897.1	chr12	-	1377	8	full-splice_match	GPN3	ENST00000228827.7	1468	8	23	68	18	12	multi-exon	FALSE	canonical	1	232732	junction_4	113812.60721134939	NA	0	NA	TRUE	NA	NA	NA	A	coding	284	855	41	895	35.0	13	True	AGTAAA	-17
PB.10184.6	chr6	+	2275	5	full-splice_match	NUS1	ENST00000368494.3	4676	5	-12	2413	-12	-2413	multi-exon	FALSE	canonical	1	161	junction_1	17572.304672409933	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	182	1063	20.0	21	False	AATAAA	-28
PB.5517.11	chr18	-	1994	7	novel_in_catalog	TMX3	novel	4927	16	NA	NA	0	81	intron_retention	FALSE	canonical	1	211080	junction_6	44643.73763350117	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	85	399	35.0	-1	True	AATAAA	-16
PB.5517.10	chr18	-	2153	16	full-splice_match	TMX3	ENST00000299608.6	4927	16	211	2563	5	459	multi-exon	FALSE	canonical	1	211080	junction_15	50988.8203001403	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	107	1471	20.0	-23	True	AATAAA	-16
PB.10428.1	chr7	+	2085	1	antisense	novelGene_RAPGEF5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.10184.7	chr6	+	2163	6	novel_not_in_catalog	NUS1	novel	4676	5	NA	NA	-12	-2055	any annotated donor/acceptor	FALSE	canonical	1	170	junction_5	16844.105359442514	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	156	593	30.0	21	False	AATAAA	-13
PB.10971.1	chr8	-	1727	3	novel_not_in_catalog	MCPH1-AS1	novel	2147	5	NA	NA	-14	-6357	any annotated donor/acceptor	FALSE	canonical	1	4399	junction_2	2867.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	-8	True	NA	NA
PB.10971.2	chr8	-	3598	3	novel_not_in_catalog	MCPH1-AS1	novel	523	4	NA	NA	4	-32277	any annotated donor/acceptor	FALSE	canonical	1	1469	junction_1	765.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	25	78	296	373	35.0	19	True	AATAAA	-29
PB.10971.3	chr8	-	3115	2	incomplete-splice_match	MCPH1-AS1	ENST00000525186.1	869	3	-58	32381	-28	-32277	3prime_fragment	FALSE	canonical	1	7094	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	816	False	AATAAA	-29
PB.6721.1	chr2	-	2212	8	novel_not_in_catalog	NIFK	novel	1734	7	NA	NA	-2	2245	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	213012.26160002899	NA	2	1	TRUE	NA	NA	NA	C	coding	293	882	25	906	15.0	0	True	NA	NA
PB.2874.1	chr12	-	4208	19	novel_in_catalog	SART3	novel	4004	19	NA	NA	-6	365	combination_of_known_junctions	FALSE	canonical	1	60374	junction_15	121715.58254024466	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	21	2966	20.0	-7	True	NA	NA
PB.10184.2	chr6	+	2157	5	full-splice_match	NUS1	ENST00000368494.3	4676	5	464	2055	464	-2055	multi-exon	FALSE	canonical	1	161	junction_1	17572.304672409933	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	6	587	30.0	497	False	AATAAA	-13
PB.7783.9	chr22	-	3984	18	novel_in_catalog	SUN2	novel	4055	19	NA	NA	-20	4	combination_of_known_junctions	FALSE	canonical	1	183205	junction_17	282887.3088817399	NA	3	NA	TRUE	NA	NA	NA	B	coding	717	2154	296	2449	10.0	-23	True	AATAAA	-15
PB.6862.14	chr2	+	1001	9	incomplete-splice_match	HNRNPA3	ENST00000411529.6	5688	11	5	4862	5	-591	3prime_fragment	FALSE	canonical	1	811	junction_3	177914.46419764296	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	954	47	1000	45.0	-40	False	NA	NA
PB.7783.5	chr22	-	3825	17	novel_in_catalog	SUN2	novel	4055	19	NA	NA	3	-4	combination_of_known_junctions	TRUE	canonical	1	21219	junction_14	376236.8160178039	NA	0	NA	TRUE	NA	NA	NA	B	coding	671	2016	272	2287	10.0	1	True	AATAAA	-18
PB.7783.2	chr22	-	3812	19	novel_in_catalog	SUN2	novel	4055	19	NA	NA	-148	5	combination_of_known_junctions	FALSE	canonical	1	92133	junction_18	344320.4000612638	NA	1	NA	TRUE	NA	NA	NA	B	coding	717	2154	123	2276	10.0	215	False	AATAAA	-16
PB.402.23	chr1	+	2324	20	full-splice_match	OSBPL9	ENST00000361556.9	2721	20	23	374	5	129	multi-exon	FALSE	canonical	1	47348	junction_1	257316.35578903352	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	138	2018	15.0	-19	True	TATAAA	-18
PB.4108.14	chr15	-	1718	6	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	-26	-33	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	46564.08094916081	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	194	700	80.0	-1	True	NA	NA
PB.7400.7	chr20	+	3061	5	incomplete-splice_match	SLCO4A1	ENST00000470412.5	986	6	1165	-2071	102	0	5prime_fragment	FALSE	canonical	1	47751	junction_4	65499.35486132669	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	89	796	5.0	-4	True	AATATA	-19
PB.7400.4	chr20	+	2577	11	novel_in_catalog	SLCO4A1	novel	2776	12	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	30898	junction_8	55076.10302808288	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	180	1829	10.0	0	True	AATATA	-21
PB.7400.5	chr20	+	2807	12	novel_not_in_catalog	SLCO4A1	novel	2776	12	NA	NA	30	0	any annotated donor/acceptor	FALSE	canonical	1	9012	junction_10	59829.75313696148	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	176	2407	5.0	4	True	AATATA	-19
PB.4108.10	chr15	-	3681	7	novel_in_catalog	LINS1	novel	511	4	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	1	30671	junction_2	26076.359987970372	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	176	1405	40.0	17	False	AATAAA	-16
PB.4108.11	chr15	-	1688	7	full-splice_match	LINS1	ENST00000314742.12	4821	7	58	3075	2	-91	multi-exon	FALSE	canonical	1	21658	junction_2	28988.326578220334	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1521	166	1686	10.0	1	True	AATATA	-18
PB.4108.12	chr15	-	1530	5	full-splice_match	LINS1	ENST00000561308.5	1612	5	-13	95	0	-33	multi-exon	FALSE	canonical	1	69133	junction_2	15740.328625857848	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	168	1478	80.0	-1	True	NA	NA
PB.4108.13	chr15	-	2300	4	novel_in_catalog	LINS1	novel	511	4	NA	NA	-25	-33	intron_retention	FALSE	canonical	1	69133	junction_1	10114.530438927948	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	193	846	80.0	0	True	NA	NA
PB.834.3	chr1	-	1589	9	full-splice_match	SH2D2A	ENST00000368198.7	1599	9	9	1	9	0	multi-exon	FALSE	canonical	1	13495	junction_8	25427.548576482455	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	141	1256	20.0	22	False	AATAAA	-29
PB.8424.4	chr3	-	2287	8	full-splice_match	DBR1	ENST00000260803.8	2666	8	23	356	23	-356	multi-exon	FALSE	canonical	1	110013	junction_4	38948.611968666024	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	132	1766	10.0	-6	True	ATTAAA	-19
PB.834.1	chr1	-	1683	9	full-splice_match	SH2D2A	ENST00000368199.7	1658	9	-18	-7	-18	7	multi-exon	FALSE	canonical	1	51573	junction_6	15572.03733459434	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	173	1342	5.0	-33	False	AATAAA	-37
PB.8424.1	chr3	-	2622	8	full-splice_match	DBR1	ENST00000260803.8	2666	8	8	36	8	-36	multi-exon	FALSE	canonical	1	110013	junction_4	38948.611968666024	NA	2	NA	TRUE	NA	NA	NA	C	coding	544	1635	147	1781	50.0	-21	True	AATAAA	-23
PB.8424.3	chr3	-	2536	8	full-splice_match	DBR1	ENST00000260803.8	2666	8	1	129	1	-129	multi-exon	FALSE	canonical	1	110013	junction_4	38948.611968666024	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	154	1788	15.0	-28	True	TATAAA	-20
PB.8424.2	chr3	-	2579	7	novel_in_catalog	DBR1	novel	2666	8	NA	NA	3	-3	no_combination_of_known_junctions	TRUE	canonical	1	5804	junction_2	71872.77203194237	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	152	1705	50.0	-26	True	AATAAA	-15
PB.8781.2	chr4	+	4429	21	full-splice_match	KIT	ENST00000412167.6	3470	21	50	-1009	29	-695	multi-exon	FALSE	canonical	1	81318	junction_1	23589.107938357905	NA	1	NA	TRUE	NA	NA	NA	C	coding	972	2919	48	2966	85.0	11	True	NA	NA
PB.1049.2	chr1	+	4597	21	incomplete-splice_match	ATP2B4	ENST00000367218.7	8918	22	8	10458	8	-11	3prime_fragment	FALSE	canonical	1	106401	junction_20	107215.83797503986	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	890	4384	40.0	0	True	ATTAAA	-14
PB.406.10	chr1	+	943	6	full-splice_match	BTF3L4	ENST00000313334.12	4703	6	179	3581	0	-20	multi-exon	FALSE	canonical	1	1261	junction_4	56795.96941826066	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	90	566	65.0	9	True	AAAACA	-31
PB.402.26	chr1	+	2416	19	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	7	130	no_combination_of_known_junctions	FALSE	canonical	1	19509	junction_3	274841.22338796826	NA	2	2	TRUE	NA	NA	NA	C	coding	558	1677	433	2109	20.0	-17	True	TATAAA	-19
PB.406.11	chr1	+	3119	5	full-splice_match	BTF3L4	ENST00000489308.6	794	5	44	-2369	1	1106	multi-exon	FALSE	canonical	1	3679	junction_4	51562.243039359724	NA	1	NA	TRUE	NA	NA	NA	C	coding	78	237	79	315	50.0	20	True	ATTAAA	-16
PB.402.25	chr1	+	2445	20	full-splice_match	OSBPL9	ENST00000462759.5	2755	20	-64	374	7	129	multi-exon	FALSE	canonical	1	130786	junction_1	249713.53698754704	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	463	2139	15.0	-17	True	TATAAA	-18
PB.10997.4	chr8	-	3564	12	novel_not_in_catalog	MTUS1	novel	3650	12	NA	NA	-207	1337	any annotated donor/acceptor	FALSE	canonical	1	43885	junction_11	113360.5913470173	NA	0	NA	TRUE	NA	NA	NA	C	coding	1115	3345	219	3563	70.0	5	True	AATGAA	-14
PB.10997.5	chr8	-	3530	11	novel_not_in_catalog	MTUS1	novel	3650	12	NA	NA	-335	1337	any annotated donor/acceptor	FALSE	canonical	1	39737	junction_8	116621.36896315358	NA	0	NA	TRUE	NA	NA	NA	C	coding	1061	3183	347	3529	70.0	-15	True	AATGAA	-14
PB.402.24	chr1	+	2674	20	full-splice_match	OSBPL9	ENST00000361556.9	2721	20	42	5	0	0	multi-exon	FALSE	canonical	1	47348	junction_1	257316.35578903352	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	119	1999	35.0	0	True	CATAAA	-24
PB.10997.1	chr8	-	3727	10	full-splice_match	MTUS1	ENST00000297488.10	3731	10	-1	5	-1	0	multi-exon	FALSE	canonical	1	92595	junction_9	79445.52754366578	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	295	1605	30.0	-2	True	AATAAA	-17
PB.10997.2	chr8	-	6134	14	novel_not_in_catalog	MTUS1	novel	3650	12	NA	NA	-350	0	any annotated donor/acceptor	FALSE	canonical	1	39737	junction_11	118572.49955156265	NA	2	NA	TRUE	NA	NA	NA	C	coding	1216	3651	362	4012	30.0	4663	False	AATAAA	-17
PB.5155.3	chr17	+	3005	15	full-splice_match	RPS6KB1	ENST00000225577.8	5375	15	-47	2417	-9	-41	multi-exon	FALSE	canonical	1	126724	junction_5	62811.579884376646	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	69	1646	70.0	-4	True	CATAAA	-14
PB.5155.2	chr17	+	1885	15	full-splice_match	RPS6KB1	ENST00000225577.8	5375	15	-113	3603	5	20	multi-exon	TRUE	canonical	1	126724	junction_5	62811.579884376646	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	135	1712	75.0	-70	False	AATAAA	-31
PB.5155.1	chr17	+	2316	15	full-splice_match	RPS6KB1	ENST00000225577.8	5375	15	-47	3106	-9	-3	multi-exon	FALSE	canonical	1	126724	junction_5	62811.579884376646	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	69	1646	20.0	-4	True	AATAAA	-19
PB.379.6	chr1	-	3594	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	24395	junction_11	228949.86950465458	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1220	2644	15.0	5	True	AATAAA	-25
PB.5155.7	chr17	+	2974	14	novel_in_catalog	RPS6KB1	novel	5479	16	NA	NA	2	-2	intron_retention	FALSE	canonical	1	126724	junction_5	65171.595671570736	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	58	972	20.0	7	True	AATAAA	-20
PB.5155.6	chr17	+	5276	15	full-splice_match	RPS6KB1	ENST00000225577.8	5375	15	-42	141	-4	2	multi-exon	FALSE	canonical	1	126724	junction_5	62811.579884376646	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	64	1641	40.0	1	True	ATTAAA	-20
PB.5155.5	chr17	+	2176	15	full-splice_match	RPS6KB1	ENST00000225577.8	5375	15	-43	3242	-5	-139	multi-exon	FALSE	canonical	1	126724	junction_5	62811.579884376646	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	65	1642	35.0	0	True	TATAAA	-13
PB.5155.4	chr17	+	3764	14	novel_in_catalog	RPS6KB1	novel	5479	16	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	126724	junction_5	56911.88251683006	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	2125	3093	20.0	-4	True	AATAAA	-20
PB.6706.12	chr2	+	2004	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	262	4452	124	-445	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	59	1315	15.0	-4324	False	AGTAAA	-20
PB.5155.9	chr17	+	5344	16	novel_in_catalog	RPS6KB1	novel	5479	16	NA	NA	-1	2	intron_retention	FALSE	canonical	1	12464	junction_6	107030.4662096213	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	741	1709	40.0	8	True	ATTAAA	-20
PB.5155.8	chr17	+	2527	15	full-splice_match	RPS6KB1	ENST00000225577.8	5375	15	-36	2884	2	219	multi-exon	FALSE	canonical	1	126724	junction_5	62811.579884376646	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	58	1635	50.0	7	True	NA	NA
PB.379.9	chr1	-	3493	11	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	42	-5	no_combination_of_known_junctions	FALSE	canonical	1	7347	junction_6	293238.8028483952	NA	6	1	TRUE	NA	NA	NA	C	coding	218	657	1892	2548	25.0	-18	True	AATAAA	-20
PB.9444.2	chr5	-	3097	8	novel_in_catalog	SHROOM1	novel	4019	10	NA	NA	-16	-62	intron_retention	FALSE	canonical	1	23983	junction_7	118277.39251644752	NA	0	NA	TRUE	NA	NA	NA	B	coding	852	2559	125	2683	100.0	230	False	NA	NA
PB.6706.13	chr2	+	2354	11	incomplete-splice_match	ACTR3	ENST00000535589.3	1530	12	22573	-1004	-14198	6	5prime_fragment	FALSE	canonical	1	1514484	junction_4	450256.37582386326	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	111	1214	20.0	NA	False	AATAAA	-21
PB.402.28	chr1	+	3568	20	full-splice_match	OSBPL9	ENST00000462759.5	2755	20	-59	-754	12	754	multi-exon	FALSE	canonical	1	130786	junction_1	249713.53698754704	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	458	2134	25.0	-12	True	AATACA	-43
PB.11722.28	chr9	-	2055	14	novel_in_catalog	PTBP3	novel	7995	14	NA	NA	-8	-958	combination_of_known_junctions	FALSE	canonical	1	155889	junction_12	138659.42233767512	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	258	1823	70.0	-57	False	NA	NA
PB.6706.10	chr2	+	2527	11	novel_in_catalog	ACTR3	novel	6718	12	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	7028	junction_1	765181.3345661275	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	285	1388	15.0	-38	True	AATAAA	-20
PB.11722.24	chr9	-	3345	13	full-splice_match	PTBP3	ENST00000343327.6	2755	13	-25	-565	11	149	multi-exon	FALSE	canonical	1	71676	junction_11	154407.44877656485	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	232	1590	5.0	15	True	NA	NA
PB.8877.5	chr4	+	2996	1	genic	HERC5	novel	NA	NA	NA	NA	-1	-2152	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	155	472	70.0	-3	True	NA	NA
PB.11722.26	chr9	-	3313	13	full-splice_match	PTBP3	ENST00000343327.6	2755	13	-104	-454	-15	38	multi-exon	FALSE	canonical	1	71676	junction_11	154407.44877656485	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	338	1669	50.0	-64	False	AAGAAA	-39
PB.6706.11	chr2	+	2252	12	novel_not_in_catalog	ACTR3	novel	6718	12	NA	NA	0	-447	any annotated donor/acceptor	FALSE	canonical	1	26557	junction_5	731274.2748413736	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	188	679	20.0	-38	True	AGTAAA	-18
PB.11722.20	chr9	-	4551	13	full-splice_match	PTBP3	ENST00000343327.6	2755	13	-117	-1679	-28	1263	multi-exon	FALSE	canonical	1	71676	junction_11	154407.44877656485	NA	3	1	TRUE	NA	NA	NA	C	coding	443	1332	351	1682	40.0	-77	False	ATTAAA	-18
PB.11722.21	chr9	-	4703	15	novel_in_catalog	PTBP3	novel	7995	14	NA	NA	37	1231	no_combination_of_known_junctions	FALSE	canonical	1	1629	junction_14	199666.42688730592	NA	5	1	TRUE	NA	NA	NA	C	coding	558	1677	190	1866	80.0	-1	True	NA	NA
PB.11722.22	chr9	-	3997	13	full-splice_match	PTBP3	ENST00000343327.6	2755	13	-94	-1148	-5	732	multi-exon	FALSE	canonical	1	71676	junction_11	154407.44877656485	NA	2	1	TRUE	NA	NA	NA	C	coding	443	1332	328	1659	30.0	-54	False	NA	NA
PB.10577.19	chr7	+	4518	9	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111763	0	no_combination_of_known_junctions	FALSE	canonical	1	16612	junction_8	97002.25803871462	NA	2	NA	TRUE	NA	NA	NA	B	coding	371	1116	90	1205	25.0	-12	False	AATAAA	-20
PB.8024.2	chr3	+	2925	5	full-splice_match	EXOG	ENST00000422077.6	1317	5	-1	-1607	1	355	multi-exon	FALSE	canonical	1	7511	junction_1	40882.1164164418	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	25	981	15.0	-13	True	GATAAA	-20
PB.8877.6	chr4	+	3317	22	novel_in_catalog	HERC5	novel	3513	23	NA	NA	0	-23	no_combination_of_known_junctions	FALSE	canonical	1	566	junction_15	62949.369906810025	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	154	3057	75.0	-2	True	NA	NA
PB.603.7	chr1	+	5435	4	novel_not_in_catalog	RBM15	novel	4244	3	NA	NA	-33	26321	any annotated donor/acceptor	FALSE	canonical	1	3126	junction_3	15156.807498795899	NA	8	NA	TRUE	NA	NA	NA	C	coding	925	2778	106	2883	15.0	8	True	AATAAA	-31
PB.9220.7	chr5	+	2858	27	full-splice_match	PARP8	ENST00000505697.6	2747	27	4	-115	2	-110	multi-exon	FALSE	canonical	1	20066	junction_1	64775.02442838771	NA	12	3	TRUE	NA	NA	NA	C	coding	852	2559	185	2743	20.0	4	True	TATAAA	-37
PB.7273.2	chr20	+	2716	3	incomplete-splice_match	TGIF2-RAB5IF	ENST00000558530.1	918	5	31226	-171	31226	171	5prime_fragment	FALSE	canonical	1	1566243	junction_1	214282.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-18
PB.7273.1	chr20	+	1081	4	full-splice_match	RAB5IF	ENST00000344795.7	1114	4	31	2	-20	-2	multi-exon	FALSE	canonical	1	1487747	junction_1	222844.8807060393	NA	0	NA	TRUE	NA	NA	NA	A	coding	129	390	188	577	30.0	-14	True	AATAAA	-18
PB.6389.13	chr2	+	2864	7	novel_in_catalog	PPP1CB	novel	721	5	NA	NA	12	-612	intron_retention	FALSE	canonical	1	2207	junction_5	690650.0472138348	NA	2	NA	TRUE	NA	NA	NA	C	coding	203	612	300	911	30.0	-28	True	AGTAAA	-14
PB.1919.6	chr11	-	3269	12	novel_in_catalog	ARHGAP1	novel	3375	13	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	1	24651	junction_8	217142.31865608058	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	129	1316	30.0	-21	True	AATAAA	-12
PB.1919.5	chr11	-	3429	14	novel_not_in_catalog	ARHGAP1	novel	3375	13	NA	NA	-5	-4	any annotated donor/acceptor	FALSE	canonical	1	239	junction_13	258357.13556368937	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	157	1476	30.0	0	True	AATAAA	-12
PB.1919.4	chr11	-	3377	13	full-splice_match	ARHGAP1	ENST00000311956.8	3375	13	-7	5	-3	-5	multi-exon	FALSE	canonical	1	380654	junction_12	128011.82831969083	NA	68	1	TRUE	NA	NA	NA	C	coding	439	1320	106	1425	30.0	2	True	AATAAA	-11
PB.1919.3	chr11	-	3462	12	novel_in_catalog	ARHGAP1	novel	3375	13	NA	NA	1	-4	intron_retention	FALSE	canonical	1	380654	junction_11	117319.05999530434	NA	4	NA	TRUE	NA	NA	NA	C	coding	248	747	114	860	30.0	-6	True	AATAAA	-12
PB.1919.2	chr11	-	3668	14	novel_not_in_catalog	ARHGAP1	novel	3375	13	NA	NA	1	-4	any annotated donor/acceptor	FALSE	canonical	1	25	junction_13	258393.32673484544	NA	2	1	TRUE	NA	NA	NA	C	coding	439	1320	396	1715	30.0	-6	True	AATAAA	-12
PB.1919.1	chr11	-	3020	14	novel_not_in_catalog	ARHGAP1	novel	3375	13	NA	NA	-3	4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	211630.63903965175	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	118	1449	25.0	-10	True	AATAAA	-20
PB.1742.10	chr11	-	1716	10	full-splice_match	RNH1	ENST00000397604.7	1722	10	5	1	5	0	multi-exon	FALSE	canonical	1	357387	junction_9	529707.7424296123	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	156	1541	15.0	-17	True	ATTAAA	-14
PB.5141.4	chr17	-	5578	10	novel_in_catalog	AC004687.2	novel	5828	13	NA	NA	-30	-8473	intron_retention	FALSE	canonical	1	7774	junction_9	20453.058257844117	NA	0	NA	TRUE	NA	NA	NA	A	coding	783	2352	1963	4314	15.0	-1	True	AATATA	-26
PB.5141.5	chr17	-	4856	8	incomplete-splice_match	RNF43	ENST00000577716.5	4367	10	14	3235	14	72	intron_retention	FALSE	canonical	1	37179	junction_3	14408.903246795373	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2610	1992	4601	100.0	11	True	NA	NA
PB.6130.6	chr19	+	2511	15	novel_in_catalog	RUVBL2	novel	2009	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9373	junction_1	547644.4763479808	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	1168	2424	10.0	3	True	TATAAA	-21
PB.6130.1	chr19	+	1855	15	novel_in_catalog	RUVBL2	novel	2009	15	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	1	45116	junction_1	540462.4403203053	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	516	1772	15.0	3	True	TATAAA	-17
PB.5141.2	chr17	-	4517	10	full-splice_match	RNF43	ENST00000407977.6	5516	10	-180	1179	1	-3	multi-exon	FALSE	canonical	1	8563	junction_9	20264.33367115244	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	902	3253	15.0	-2	True	AATATA	-26
PB.6130.2	chr19	+	2359	13	novel_in_catalog	RUVBL2	novel	2009	15	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	347222	junction_1	505568.0166890601	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	43	810	15.0	-17	True	TATAAA	-17
PB.6862.17	chr2	+	2319	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	194	-446	8	446	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	44	1180	15.0	-37	False	AATAAA	-22
PB.11451.3	chr9	+	3086	14	novel_in_catalog	UHRF2	novel	3723	17	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	3693	junction_1	112816.44957154516	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	479	2218	40.0	-131	False	AATAAA	-13
PB.603.5	chr1	+	3314	3	full-splice_match	RBM15	ENST00000617047.1	3284	3	-34	4	-34	-4	multi-exon	FALSE	canonical	1	24569	junction_1	1090.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	933	2802	107	2908	25.0	7	True	AATAAA	-16
PB.6389.12	chr2	+	3183	9	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	9	-282	any annotated donor/acceptor	FALSE	canonical	1	5031	junction_1	671594.1403667377	NA	4	1	TRUE	NA	NA	NA	C	coding	327	984	137	1120	10.0	-31	True	ATTAAA	-15
PB.11451.5	chr9	+	3473	16	novel_in_catalog	UHRF2	novel	3723	17	NA	NA	12	-5	intron_retention	FALSE	canonical	1	33746	junction_11	96500.8789181851	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	287	2035	35.0	0	True	AATAAA	-15
PB.240.20	chr1	-	3943	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-6	-12	combination_of_known_junctions	FALSE	canonical	1	7660	junction_21	153873.4036048573	NA	32	2	TRUE	NA	NA	NA	C	coding	1186	3561	34	3594	70.0	6	True	NA	NA
PB.7799.3	chr22	+	2025	2	full-splice_match	ATF4	ENST00000337304.2	2019	2	-5	-1	-5	1	multi-exon	FALSE	canonical	1	2455928	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	888	1943	15.0	-10	True	AATAAA	-18
PB.7799.2	chr22	+	2122	1	novel_in_catalog	ATF4	novel	1910	4	NA	NA	-5	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	263	792	1253	2044	30.0	-10	True	AATAAA	-14
PB.7799.1	chr22	+	1424	3	full-splice_match	ATF4	ENST00000396680.2	1419	3	-5	0	-5	0	multi-exon	FALSE	canonical	1	516471	junction_1	969728.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	286	1341	15.0	-10	True	AATAAA	-19
PB.10753.1	chr7	-	2929	2	novel_in_catalog	POLR2J	novel	932	4	NA	NA	-12	-336	intron_retention	FALSE	canonical	1	601432	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	186	561	2174	2734	20.0	2	True	AATAAA	-19
PB.7478.7	chr21	-	3476	19	incomplete-splice_match	LTN1	ENST00000361371.9	7685	30	8	19403	8	10859	3prime_fragment	FALSE	canonical	1	97835	junction_8	20318.468293481423	NA	0	NA	TRUE	NA	NA	NA	C	coding	1134	3402	73	3474	75.0	-15	True	NA	NA
PB.1674.34	chr10	-	2027	12	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	13	22247	-6	-1164	3prime_fragment	FALSE	canonical	1	780023	junction_11	263801.84864755545	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1893	135	2027	55.0	6	True	NA	NA
PB.7478.5	chr21	-	5666	30	full-splice_match	LTN1	ENST00000361371.9	7685	30	10	2009	10	-2009	multi-exon	FALSE	canonical	1	97835	junction_19	35234.60122910544	NA	0	NA	TRUE	NA	NA	NA	C	coding	1766	5301	71	5371	45.0	-13	True	AATAAA	-15
PB.7478.4	chr21	-	7678	30	full-splice_match	LTN1	ENST00000361371.9	7685	30	6	1	6	-1	multi-exon	FALSE	canonical	1	97835	junction_19	35234.60122910544	NA	1	NA	TRUE	NA	NA	NA	C	coding	1766	5301	75	5375	5.0	-17	True	NA	NA
PB.7478.3	chr21	-	7862	31	novel_in_catalog	LTN1	novel	7685	30	NA	NA	13	0	no_combination_of_known_junctions	FALSE	canonical	1	2248	junction_19	51094.51736062838	NA	2	NA	TRUE	NA	NA	NA	C	coding	767	2304	68	2371	5.0	-10	True	NA	NA
PB.1674.30	chr10	-	2611	16	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	-39	14776	-39	6307	3prime_fragment	FALSE	canonical	1	780023	junction_15	321189.5091826976	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2424	187	2610	55.0	408	False	NA	NA
PB.1674.33	chr10	-	2168	13	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	13	21191	-6	-108	3prime_fragment	FALSE	canonical	1	780023	junction_12	304132.19512778166	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2034	135	2168	65.0	6	True	NA	NA
PB.1674.32	chr10	-	2385	14	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	-59	20964	-59	119	3prime_fragment	FALSE	canonical	1	780023	junction_13	327378.6482538903	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2178	207	2384	60.0	388	False	ATTAAA	-20
PB.603.4	chr1	+	3210	2	full-splice_match	RBM15	ENST00000487146.6	3316	2	102	4	-41	-4	multi-exon	FALSE	canonical	1	40210	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2778	114	2891	25.0	0	True	AATAAA	-16
PB.8155.2	chr3	-	661	4	full-splice_match	RPL29	ENST00000294189.10	723	4	33	29	-14	0	multi-exon	FALSE	canonical	1	77954	junction_1	1785380.8490183698	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	62	541	15.0	-15	True	AATAAA	-12
PB.6389.11	chr2	+	2754	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	235	1904	77	-612	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	38	1021	30.0	-26	True	AGTAAA	-14
PB.7478.9	chr21	-	1694	10	incomplete-splice_match	LTN1	ENST00000389195.6	2714	13	46	5578	-18	0	3prime_fragment	FALSE	canonical	1	117644	junction_5	17088.379868881948	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1596	99	1694	65.0	-1	True	NA	NA
PB.7478.8	chr21	-	2489	13	incomplete-splice_match	LTN1	ENST00000361371.9	7685	30	6	31492	6	-1186	3prime_fragment	FALSE	canonical	1	97835	junction_2	20991.629305742856	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2415	75	2489	65.0	-17	True	NA	NA
PB.8146.14	chr3	-	5048	24	incomplete-splice_match	DCAF1	ENST00000423656.5	5946	25	-22	2530	-14	-555	3prime_fragment	FALSE	canonical	0	0	junction_15	98082.30015554998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	153	4676	75.0	-33	True	TATAAA	-6
PB.629.4	chr1	+	3746	4	full-splice_match	DCLRE1B	ENST00000650450.1	3734	4	-19	7	-5	7	multi-exon	FALSE	canonical	1	102506	junction_1	4190.0460883171945	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	260	1858	25.0	-19	True	NA	NA
PB.8146.12	chr3	-	5180	26	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	1	-555	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	105223.5650907153	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	285	4808	75.0	-18	True	TATAAA	-6
PB.8146.13	chr3	-	5046	25	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	27	-555	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	100902.64480634256	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	151	4674	75.0	16	True	TATAAA	-6
PB.8146.10	chr3	-	5588	23	novel_in_catalog	DCAF1	novel	5946	25	NA	NA	-73	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_15	107500.59212561314	NA	0	NA	TRUE	NA	NA	NA	C	coding	1425	4278	384	4661	10.0	5563	False	AATAAA	-20
PB.8146.11	chr3	-	5212	26	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	-6	-555	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	105917.82403769442	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	317	4840	75.0	-25	True	TATAAA	-6
PB.6559.2	chr2	+	2219	2	full-splice_match	BOLA3-AS1	ENST00000423477.2	1804	2	17	-432	11	432	multi-exon	FALSE	canonical	1	63591	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	11	True	NA	NA
PB.6559.1	chr2	+	2022	2	full-splice_match	BOLA3-AS1	ENST00000423477.2	1804	2	53	-271	47	271	multi-exon	FALSE	canonical	1	63591	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-48	False	NA	NA
PB.6389.10	chr2	+	4112	9	full-splice_match	PPP1CB	ENST00000358506.6	4771	9	33	626	33	-626	multi-exon	FALSE	canonical	1	117987	junction_1	641166.1381704726	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	128	1111	50.0	0	True	NA	NA
PB.11159.1	chr8	-	1495	5	novel_not_in_catalog	AC104232.1	novel	875	5	NA	NA	-30	628	any annotated donor/acceptor	FALSE	canonical	1	3134	junction_2	3879.573454324586	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-4	True	NA	NA
PB.240.26	chr1	-	3820	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	3	-13	combination_of_known_junctions	FALSE	canonical	1	17554	junction_13	161573.3426352488	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	89	3472	70.0	24	True	NA	NA
PB.10100.5	chr6	+	3158	2	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	325	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	211	636	1135	1770	25.0	0	True	NA	NA
PB.10493.1	chr7	-	2593	2	full-splice_match	TRGV3	ENST00000390346.2	537	2	27	-2083	27	2083	multi-exon	FALSE	canonical	1	12015	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	157	759	75.0	-1	True	NA	NA
PB.841.16	chr1	+	4731	2	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	-11	-121	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	109	330	2880	3209	75.0	-20	True	NA	NA
PB.6389.17	chr2	+	2293	4	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	-18	-610	intron_retention	FALSE	canonical	1	56	junction_1	834082.738666588	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	AGTAAA	-16
PB.10493.2	chr7	-	1720	2	full-splice_match	TRGV3	ENST00000390346.2	537	2	31	-1214	31	1214	multi-exon	FALSE	canonical	1	12015	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	153	755	20.0	3	True	CATAAA	-27
PB.11826.3	chr9	-	2596	7	novel_in_catalog	WDR34	novel	1755	9	NA	NA	-17	1	intron_retention	FALSE	canonical	1	333987	junction_6	264079.7257456333	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1700	2512	25.0	-42	True	AAGAAA	-12
PB.6894.1	chr2	+	2468	11	novel_in_catalog	GULP1	novel	2643	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	19062	junction_6	66807.253901429	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	644	1420	85.0	-24	True	NA	NA
PB.651.1	chr1	-	2656	4	novel_not_in_catalog	TBX15	novel	3492	8	NA	NA	-330	0	any annotated donor/acceptor	FALSE	canonical	1	4479	junction_3	23752.89024285021	NA	0	NA	TRUE	NA	NA	NA	A	coding	287	864	108	971	15.0	28	False	AATAAA	-15
PB.911.11	chr1	+	2371	16	incomplete-splice_match	DCAF6	ENST00000367843.7	3302	20	9	12181	-3	-305	3prime_fragment	FALSE	canonical	1	102380	junction_10	237758.80653902647	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2127	243	2369	65.0	-26	True	NA	NA
PB.10962.1	chr8	-	1804	6	full-splice_match	ERICH1	ENST00000262109.7	1813	6	18	-9	18	9	multi-exon	FALSE	canonical	1	126033	junction_2	46916.28264302277	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	61	1392	10.0	2	True	ATTAAA	-27
PB.4188.1	chr16	+	3201	1	full-splice_match	AC092117.1	ENST00000621230.1	3250	1	48	1	48	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	119	360	1925	2284	10.0	1	True	NA	NA
PB.6389.16	chr2	+	2582	6	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	-18	-608	intron_retention	FALSE	canonical	1	56	junction_1	809728.8686421893	NA	7	1	TRUE	NA	NA	NA	C	coding	184	555	291	845	20.0	-19	True	AGTAAA	-18
PB.10670.6	chr7	-	4236	1	novel_in_catalog	PEX1	novel	4385	24	NA	NA	10	-13421	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	2	367	90.0	-68	True	NA	NA
PB.240.24	chr1	-	3902	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-10	-13	combination_of_known_junctions	FALSE	canonical	1	23409	junction_3	150446.99514078037	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	111	3554	70.0	2	True	NA	NA
PB.417.4	chr1	-	2397	7	novel_in_catalog	C1orf123	novel	1085	8	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	457287	junction_6	150650.97920404928	NA	1	NA	TRUE	NA	NA	NA	B	coding	130	393	1484	1876	25.0	-28	True	AATAAA	-20
PB.10670.5	chr7	-	4738	24	novel_not_in_catalog	PEX1	novel	3329	21	NA	NA	2	-111	any annotated donor/acceptor	FALSE	canonical	1	861	junction_14	56041.81445366467	NA	1	1	TRUE	NA	NA	NA	C	coding	630	1893	2526	4418	30.0	-76	True	AATAAA	-16
PB.10670.2	chr7	-	4291	23	novel_in_catalog	PEX1	novel	3329	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	20773	junction_15	52164.878129033736	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	1968	3860	25.0	-73	True	AATAAA	-19
PB.10670.3	chr7	-	4167	23	full-splice_match	PEX1	ENST00000428214.5	3681	23	-55	-431	41	0	multi-exon	FALSE	canonical	1	2123	junction_12	56696.72630651644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1226	3681	56	3736	25.0	-37	True	AATAAA	-19
PB.10670.1	chr7	-	4288	24	full-splice_match	PEX1	ENST00000248633.8	4385	24	-9	106	-9	-100	multi-exon	FALSE	canonical	1	69601	junction_15	48612.84417134242	NA	0	NA	TRUE	NA	NA	NA	C	coding	1283	3852	106	3957	25.0	-87	False	AATAAA	-27
PB.4488.1	chr16	-	2007	12	full-splice_match	ZDHHC1	ENST00000565726.2	2261	12	-14	268	-14	-1	multi-exon	FALSE	canonical	1	45843	junction_1	21637.844822485982	NA	1	NA	TRUE	NA	NA	NA	A	coding	479	1440	378	1817	15.0	-45	True	AATAAA	-20
PB.911.10	chr1	+	3116	18	incomplete-splice_match	DCAF6	ENST00000312263.10	3186	19	-41	7018	-6	4849	3prime_fragment	FALSE	canonical	1	142654	junction_7	260721.96375249058	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	246	2906	55.0	-29	True	AATAAA	-12
PB.621.6	chr1	-	3995	5	full-splice_match	SLC16A1	ENST00000538576.5	4374	5	-132	511	-14	-511	multi-exon	FALSE	canonical	1	5363	junction_4	459240.8194847231	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	965	2467	35.0	-1	True	AATAAA	-9
PB.777.4	chr1	+	3942	27	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-17	-6	combination_of_known_junctions	FALSE	canonical	1	11481	junction_5	407281.9964864149	NA	9	NA	TRUE	NA	NA	NA	C	coding	1079	3240	152	3391	15.0	-880	False	TATAAA	-13
PB.8511.4	chr3	+	2302	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	43	4223	0	319	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	16	1215	70.0	-3	True	NA	NA
PB.8511.5	chr3	+	3570	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	27	2971	-9	1571	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	32	1231	25.0	-19	True	ATTAAA	-26
PB.8511.6	chr3	+	6528	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	37	3	1	-3	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	44	1	TRUE	NA	NA	NA	C	coding	399	1200	22	1221	25.0	-9	True	AATAAA	-19
PB.8511.7	chr3	+	4427	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	36	2105	0	-2105	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	2	NA	TRUE	NA	NA	NA	C	coding	399	1200	23	1222	20.0	-10	True	AATAGA	-19
PB.8511.1	chr3	+	2780	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	43	3745	0	797	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	16	1215	10.0	-3	True	AATAAA	-19
PB.8511.2	chr3	+	2496	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	43	4029	0	513	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	16	1215	20.0	-3	True	ATTAAA	-19
PB.8511.3	chr3	+	4052	9	novel_not_in_catalog	SEC62	novel	363	2	NA	NA	-11	-1911	intron_retention	FALSE	non_canonical	0	0	junction_8	474852.66728790465	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	34	1233	35.0	-21	True	NA	NA
PB.2781.3	chr12	-	3371	6	full-splice_match	LIN7A	ENST00000552864.5	6112	6	176	2565	31	2490	multi-exon	FALSE	canonical	1	90912	junction_4	9874.088749854338	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	67	729	40.0	-10	True	AATAAA	-17
PB.2781.2	chr12	-	2396	1	incomplete-splice_match	LIN7A	ENST00000552864.5	6112	6	143007	3	94430	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AGTAAA	-14
PB.2781.1	chr12	-	5923	6	full-splice_match	LIN7A	ENST00000552864.5	6112	6	186	3	-35	-3	multi-exon	FALSE	canonical	1	90912	junction_4	9874.088749854338	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	57	719	30.0	0	True	AGTAAA	-14
PB.4769.14	chr17	-	2448	19	incomplete-splice_match	MYH10	ENST00000269243.8	7662	41	28	44493	-16	2219	3prime_fragment	FALSE	canonical	1	205633	junction_14	86190.48910729974	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2337	112	2448	60.0	609	False	NA	NA
PB.8511.8	chr3	+	4169	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	32	2367	-4	2175	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	27	1226	70.0	-14	True	NA	NA
PB.2781.6	chr12	-	2365	6	incomplete-splice_match	LIN7A	ENST00000261203.7	989	7	74	12288	-2	-12288	3prime_fragment	TRUE	canonical	1	13812	junction_3	41866.263575341894	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	428	763	60.0	0	True	NA	NA
PB.4769.11	chr17	-	3290	22	novel_not_in_catalog	MYH10	novel	7762	43	NA	NA	-594	-6557	any annotated donor/acceptor	FALSE	canonical	1	12043	junction_21	117500.29122026918	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2913	377	3289	75.0	-13	True	AAGAAA	-16
PB.4769.10	chr17	-	3457	23	novel_not_in_catalog	MYH10	novel	7762	43	NA	NA	-687	-6557	any annotated donor/acceptor	FALSE	canonical	1	2600	junction_22	128934.94964930254	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2823	634	3456	75.0	-106	False	AAGAAA	-16
PB.5588.1	chr19	-	1219	6	full-splice_match	PLEKHJ1	ENST00000326631.6	1206	6	-9	-4	1	1	multi-exon	FALSE	canonical	1	488711	junction_5	204593.2306948595	NA	1	NA	TRUE	NA	NA	NA	A	coding	149	450	82	531	25.0	338	False	AATAAA	-19
PB.10019.3	chr6	+	6241	16	full-splice_match	CDC5L	ENST00000371477.3	6423	16	175	7	175	-7	multi-exon	FALSE	canonical	1	416522	junction_6	113056.18427301239	NA	3	NA	TRUE	NA	NA	NA	C	coding	802	2409	125	2533	35.0	-10	True	NA	NA
PB.8257.22	chr3	+	2998	11	full-splice_match	ST3GAL6	ENST00000394162.5	3571	11	-22	595	-9	-4	multi-exon	FALSE	canonical	1	5562	junction_1	57734.38115447328	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	514	1509	35.0	-7567	False	AATAAA	-20
PB.8257.23	chr3	+	1703	10	full-splice_match	ST3GAL6	ENST00000613264.4	3399	10	-188	1884	41	17	multi-exon	FALSE	canonical	1	5929	junction_1	51591.726873383275	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	349	1503	40.0	12	True	AAGAAA	-16
PB.8257.24	chr3	+	2807	10	full-splice_match	ST3GAL6	ENST00000613264.4	3399	10	-3	595	-3	-4	multi-exon	FALSE	canonical	1	5929	junction_1	51591.726873383275	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	164	1318	35.0	0	True	AATAAA	-20
PB.8257.25	chr3	+	1740	10	full-splice_match	ST3GAL6	ENST00000613264.4	3399	10	212	1447	202	5	multi-exon	FALSE	canonical	1	5929	junction_1	51591.726873383275	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	108	1103	25.0	-7333	False	NA	NA
PB.8257.26	chr3	+	3203	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	5562	junction_1	61967.045000064354	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	977	1714	35.0	10	True	AATAAA	-20
PB.10019.2	chr6	+	1839	13	incomplete-splice_match	CDC5L	ENST00000371477.3	6423	16	185	23870	185	-23870	3prime_fragment	FALSE	canonical	1	416522	junction_6	91314.86364086627	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1725	115	1839	65.0	0	True	NA	NA
PB.8257.28	chr3	+	3313	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	8037	junction_1	59401.798818638475	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	492	1229	40.0	-60	False	NA	NA
PB.8257.29	chr3	+	2580	9	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	1	8336	junction_4	63034.12298199583	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	528	1091	35.0	-48	False	AATAAA	-20
PB.11362.1	chr8	-	2950	3	full-splice_match	ARC	ENST00000356613.3	2948	3	-7	5	-7	-5	multi-exon	FALSE	canonical	1	42535	junction_2	6914.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	396	1191	209	1399	10.0	-3	True	AATAAA	-14
PB.10019.1	chr6	+	2829	16	full-splice_match	CDC5L	ENST00000371477.3	6423	16	185	3409	185	-3409	multi-exon	FALSE	canonical	1	416522	junction_6	113056.18427301239	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	115	2523	80.0	0	True	AAAAAG	-36
PB.6389.14	chr2	+	3354	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	248	1291	90	1	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	25	1008	40.0	-13	True	AATAAA	-22
PB.6635.2	chr2	+	2814	18	novel_not_in_catalog	NCAPH	novel	2763	18	NA	NA	-44	-2475	any annotated donor/acceptor	FALSE	canonical	1	7009	junction_17	89508.08923367193	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	88	2226	40.0	-58	False	AATAAA	-27
PB.8339.7	chr3	-	2797	8	novel_not_in_catalog	ILDR1	novel	2659	7	NA	NA	-56167	-2	any annotated donor/acceptor	FALSE	canonical	1	5325	junction_6	15507.227796042958	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	652	1755	15.0	228	False	AATAAA	-13
PB.911.12	chr1	+	3105	18	novel_in_catalog	DCAF6	novel	724	5	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	22253	junction_10	280407.2911216961	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	242	1630	20.0	-25	True	ATTAAA	-20
PB.12018.1	chrX	-	2627	1	novel_in_catalog	DMD	novel	3856	18	NA	NA	-8	-49741	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-14	False	AATAAA	-8
PB.9425.2	chr5	+	4660	9	full-splice_match	PRRC1	ENST00000296666.12	4699	9	36	3	5	-3	multi-exon	FALSE	canonical	1	274967	junction_5	81106.11879112065	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	153	1490	30.0	5	True	AATAAA	-21
PB.6547.1	chr2	+	3552	3	novel_not_in_catalog	EMX1	novel	1528	3	NA	NA	-105	615	any annotated donor/acceptor	FALSE	canonical	1	239	junction_1	25790.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	35	108	195	302	50.0	-1478	False	AATAAA	-17
PB.4476.4	chr16	+	2425	2	incomplete-splice_match	PDP2	ENST00000566805.5	558	5	-15	6476	3	1513	3prime_fragment	FALSE	canonical	1	9770	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	186	1775	15.0	19	True	NA	NA
PB.4476.5	chr16	+	3521	2	incomplete-splice_match	PDP2	ENST00000566805.5	558	5	-8	5373	-8	-1562	intron_retention	FALSE	canonical	1	9770	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	179	1768	20.0	26	True	AAGAAA	-18
PB.4476.6	chr16	+	2462	2	full-splice_match	PDP2	ENST00000568398.1	362	2	58	-2158	7	1513	multi-exon	FALSE	canonical	1	3023	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	223	1812	15.0	74	True	NA	NA
PB.4476.1	chr16	+	2500	2	novel_not_in_catalog	PDP2	novel	560	2	NA	NA	-4	1500	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	274	1863	30.0	-4	True	TTTAAA	-34
PB.4476.2	chr16	+	2404	2	full-splice_match	PDP2	ENST00000311765.3	7146	2	165	4577	-5	1508	multi-exon	FALSE	canonical	1	26647	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	170	1759	15.0	11	True	TTTAAA	-42
PB.4476.3	chr16	+	3090	2	full-splice_match	PDP2	ENST00000311765.3	7146	2	168	3888	-2	-1981	multi-exon	FALSE	canonical	1	26647	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	167	1756	10.0	14	True	AATAAA	-19
PB.8876.4	chr4	-	2745	5	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	14033	junction_4	10277.398658585742	NA	1	NA	FALSE	NA	NA	NA	B	coding	114	345	1530	1874	25.0	-55	False	NA	NA
PB.8876.5	chr4	-	2237	6	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9959	junction_4	11520.961765408303	NA	3	2	FALSE	NA	NA	NA	B	coding	130	393	1377	1769	15.0	98	False	NA	NA
PB.8876.6	chr4	-	2164	5	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	14033	junction_4	10390.784053669868	NA	1	NA	FALSE	NA	NA	NA	B	coding	115	348	1349	1696	15.0	126	False	NA	NA
PB.8876.7	chr4	-	2423	6	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9959	junction_4	11490.213202547637	NA	2	1	FALSE	NA	NA	NA	B	coding	127	384	1551	1934	15.0	-76	False	NA	NA
PB.8876.1	chr4	-	2683	5	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12395	junction_1	11936.966791756606	NA	1	NA	FALSE	NA	NA	NA	B	coding	115	348	1549	1896	35.0	-74	False	AATAAA	-17
PB.8876.2	chr4	-	2439	5	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12395	junction_1	11944.631377736192	NA	2	NA	FALSE	NA	NA	NA	B	coding	114	345	1320	1664	30.0	155	False	AATAAA	-15
PB.8876.3	chr4	-	2766	6	antisense	novelGene_HERC6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5146	junction_1	13373.133927393385	NA	1	NA	FALSE	NA	NA	NA	B	coding	130	393	1476	1868	15.0	-1	True	NA	NA
PB.8876.8	chr4	-	3110	1	intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-46	False	NA	NA
PB.9425.1	chr5	+	1665	9	full-splice_match	PRRC1	ENST00000296666.12	4699	9	85	2949	38	-11	multi-exon	FALSE	canonical	1	274967	junction_5	81106.11879112065	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	104	1441	75.0	-1	True	AAGAAA	-45
PB.9881.1	chr6	-	4429	29	incomplete-splice_match	VARS	ENST00000375663.7	4312	30	174	4	174	-4	intron_retention	FALSE	canonical	1	339254	junction_28	188348.7280785834	NA	0	NA	TRUE	NA	NA	NA	C	coding	1264	3795	563	4357	20.0	190	False	AATAAA	-13
PB.9881.3	chr6	-	4035	30	novel_not_in_catalog	VARS	novel	392	2	NA	NA	209	-4	any annotated donor/acceptor	FALSE	canonical	1	4491	junction_29	233540.1875534627	NA	2	NA	TRUE	NA	NA	NA	C	coding	969	2910	1054	3963	20.0	7	True	AATAAA	-13
PB.9881.2	chr6	-	3991	30	full-splice_match	VARS	ENST00000375663.7	4312	30	317	4	-137	-4	multi-exon	TRUE	canonical	1	339254	junction_28	192685.91859186537	NA	0	NA	TRUE	NA	NA	NA	C	coding	1264	3795	125	3919	20.0	115	True	AATAAA	-13
PB.10203.8	chr6	+	2342	5	full-splice_match	RNF146	ENST00000480444.1	843	5	-45	-1454	3	-5	multi-exon	FALSE	canonical	1	20660	junction_2	72878.82496094116	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	602	1678	30.0	-21	True	AATAAA	-15
PB.10203.9	chr6	+	2365	5	novel_in_catalog	RNF146	novel	2369	3	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	17413	junction_2	76001.24962459499	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	625	1701	30.0	-12	True	AATAAA	-15
PB.8712.2	chr4	+	1689	11	incomplete-splice_match	NCAPG	ENST00000251496.6	4661	21	49	19392	49	2323	3prime_fragment	FALSE	canonical	1	167764	junction_4	70663.63330631959	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	128	1687	70.0	-41	True	NA	NA
PB.6351.15	chr2	-	6098	29	novel_not_in_catalog	ITSN2	novel	5814	39	NA	NA	-33	-905	intron_retention	FALSE	canonical	1	115515	junction_28	63421.93407456863	NA	0	NA	TRUE	NA	NA	NA	C	coding	1151	3456	276	3731	75.0	-23	True	NA	NA
PB.10203.1	chr6	+	2065	4	full-splice_match	RNF146	ENST00000356799.6	2267	4	-8	210	1	-5	multi-exon	FALSE	canonical	1	66355	junction_2	57187.957323975905	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	325	1401	30.0	-23	True	AATAAA	-15
PB.10203.2	chr6	+	7980	3	novel_in_catalog	RNF146	novel	2369	3	NA	NA	-8	0	intron_retention	FALSE	canonical	1	116492	junction_1	44104.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	358	1077	6043	7119	50.0	-51	False	AATAAA	-10
PB.10203.3	chr6	+	2182	5	novel_in_catalog	RNF146	novel	2369	3	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	1	20660	junction_2	74071.95665828937	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	441	1517	25.0	-30	True	AATAAA	-16
PB.10203.4	chr6	+	6925	1	novel_in_catalog	RNF146	novel	2369	3	NA	NA	-5	-6989	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-29	True	NA	NA
PB.10203.5	chr6	+	3948	5	novel_in_catalog	RNF146	novel	2369	3	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	11259	junction_2	76457.68928793231	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	2208	3284	30.0	-26	True	AATAAA	-15
PB.10203.6	chr6	+	1941	3	full-splice_match	RNF146	ENST00000368314.5	2369	3	228	200	-2	-4	multi-exon	FALSE	canonical	1	71376	junction_2	22558.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	200	1276	25.0	-26	True	AATAAA	-16
PB.10203.7	chr6	+	8210	2	full-splice_match	RNF146	ENST00000495188.2	593	2	-8	-7609	3	-5	multi-exon	FALSE	canonical	1	116492	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	358	1077	6470	7546	30.0	-21	True	AATAAA	-15
PB.6941.6	chr2	-	4124	13	novel_in_catalog	FAM126B	novel	9333	12	NA	NA	7	-571	combination_of_known_junctions	FALSE	canonical	1	12944	junction_1	31237.65564487034	NA	2	NA	TRUE	NA	NA	NA	C	coding	586	1761	158	1918	80.0	30	True	NA	NA
PB.10382.1	chr7	-	3626	5	full-splice_match	FBXL18	ENST00000382368.7	3498	5	-21	-107	-21	0	multi-exon	FALSE	canonical	1	58247	junction_1	58161.44038095601	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	146	2302	80.0	-23	False	NA	NA
PB.10382.2	chr7	-	3483	5	full-splice_match	FBXL18	ENST00000382368.7	3498	5	-9	24	-9	0	multi-exon	FALSE	canonical	1	58247	junction_1	58161.44038095601	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	134	2290	100.0	-11	True	NA	NA
PB.1565.17	chr10	-	4690	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	-47	-4	no_combination_of_known_junctions	FALSE	canonical	1	6169	junction_3	125256.28623969338	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	168	2429	25.0	69	False	NA	NA
PB.10382.4	chr7	-	3388	5	novel_not_in_catalog	FBXL18	novel	2526	7	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1100	junction_1	73139.73420959362	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	105	2159	10.0	18	True	AATAAA	-20
PB.10382.5	chr7	-	3169	5	novel_in_catalog	FBXL18	novel	2526	7	NA	NA	-10	0	intron_retention	FALSE	canonical	1	5874	junction_1	71681.56672046168	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	135	2540	10.0	-12	True	AATAAA	-20
PB.6557.1	chr2	+	3773	1	incomplete-splice_match	TET3	ENST00000409262.7	11388	11	117997	3	57241	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-24
PB.5381.1	chr18	+	3970	1	novel_in_catalog	RAB12	novel	2145	6	NA	NA	1091	-21062	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	1064	False	NA	NA
PB.6359.1	chr2	-	5341	8	full-splice_match	KIF3C	ENST00000264712.7	5344	8	0	3	0	-3	multi-exon	FALSE	canonical	1	211575	junction_3	48432.39051481552	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	581	2962	15.0	-14	True	AATAAA	-20
PB.5732.5	chr19	+	2377	4	full-splice_match	ZNF441	ENST00000357901.4	4356	4	-3	1982	-3	-390	multi-exon	FALSE	canonical	1	32173	junction_1	4546.590004241274	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	106	2187	50.0	19	True	AATATA	-16
PB.9779.3	chr6	-	3218	6	novel_in_catalog	TDP2	novel	2071	7	NA	NA	6	0	intron_retention	FALSE	canonical	1	569490	junction_2	29572.758035732822	NA	0	NA	TRUE	NA	NA	NA	B	coding	216	651	63	713	15.0	502	False	AATAAA	-15
PB.9425.7	chr5	+	5613	8	novel_in_catalog	PRRC1	novel	4699	9	NA	NA	0	-3	intron_retention	FALSE	canonical	1	274967	junction_4	80813.97379671615	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	1247	2443	30.0	0	True	AATAAA	-21
PB.5732.6	chr19	+	3639	4	full-splice_match	ZNF441	ENST00000357901.4	4356	4	29	688	29	-688	multi-exon	FALSE	canonical	1	32173	junction_1	4546.590004241274	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	74	2155	55.0	5	True	NA	NA
PB.2583.22	chr12	-	2535	6	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-158	-32708	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1130927.1395861716	NA	10	NA	TRUE	NA	NA	NA	B	coding	181	546	308	853	15.0	2	True	ATTAAA	-12
PB.6168.1	chr19	-	920	6	full-splice_match	ETFB	ENST00000309244.8	900	6	-19	-1	-19	-1	multi-exon	FALSE	canonical	1	1511516	junction_1	258008.7331766892	NA	0	NA	TRUE	NA	NA	NA	A	coding	255	768	112	879	20.0	6512	False	AATAAA	-18
PB.2583.23	chr12	-	2236	5	full-splice_match	ARF3	ENST00000256682.8	4105	5	65	1804	-9	894	multi-exon	FALSE	canonical	1	1250751	junction_4	709788.2310214082	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	271	816	10.0	-10	True	AATAAA	-24
PB.531.7	chr1	+	3182	7	novel_in_catalog	ZNF326	novel	1956	10	NA	NA	6	-10869	intron_retention	FALSE	canonical	1	221571	junction_1	65294.59308310979	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	531	2651	3181	55.0	33	True	NA	NA
PB.9344.1	chr5	+	3063	2	incomplete-splice_match	ARRDC3-AS1	ENST00000625713.2	2500	3	41	-521	-7	521	intron_retention	FALSE	canonical	1	17502	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-16	True	AATAAA	-24
PB.849.21	chr1	-	2904	14	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	12	-185	intron_retention	FALSE	canonical	1	1448	junction_13	249438.7901874476	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	257	2050	45.0	-14	True	ATTAAA	-17
PB.752.2	chr1	+	3108	13	full-splice_match	TUFT1	ENST00000368849.7	3111	13	2	1	-1	-1	multi-exon	FALSE	canonical	1	59885	junction_1	51410.19522402363	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	61	1233	5.0	-2	True	AATAAA	-22
PB.5283.8	chr17	-	2855	20	full-splice_match	TMC6	ENST00000322914.7	2786	20	-67	-2	-67	0	multi-exon	FALSE	canonical	1	17198	junction_19	115745.87989213932	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	209	2626	0.0	1837	False	ATTAAA	-17
PB.2583.21	chr12	-	2820	2	full-splice_match	ARF3	ENST00000485410.5	563	2	-47	-2210	-15	-488	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-16	True	ATTAAA	-12
PB.5732.2	chr19	+	3435	4	full-splice_match	ZNF441	ENST00000357901.4	4356	4	-60	981	32	611	multi-exon	FALSE	canonical	1	32173	junction_1	4546.590004241274	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	163	2244	65.0	-38	True	NA	NA
PB.9425.6	chr5	+	2940	9	full-splice_match	PRRC1	ENST00000296666.12	4699	9	31	1728	0	905	multi-exon	FALSE	canonical	1	274967	junction_5	81106.11879112065	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	158	1495	35.0	0	True	ATTAAA	-37
PB.5732.3	chr19	+	5001	3	novel_in_catalog	ZNF441	novel	560	2	NA	NA	32	-7	intron_retention	FALSE	canonical	1	32173	junction_1	5533.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	887	2836	45.0	-38	True	NA	NA
PB.10627.1	chr7	-	3625	3	novel_not_in_catalog	YWHAG	novel	3750	2	NA	NA	-260	15	any annotated donor/acceptor	FALSE	canonical	1	559	junction_2	757717.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	247	744	84	827	15.0	-275	False	AATAAA	-34
PB.4802.1	chr17	-	1003	7	full-splice_match	PEMT	ENST00000255389.9	1013	7	8	2	8	0	multi-exon	FALSE	canonical	1	330832	junction_6	72794.64592128707	NA	2	NA	TRUE	NA	NA	NA	A	coding	236	711	67	777	20.0	15	True	AATAAA	-15
PB.2583.24	chr12	-	2021	1	novel_in_catalog	ARF3	novel	4105	5	NA	NA	-15	680	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-16	True	NA	NA
PB.11123.2	chr8	-	13424	86	novel_not_in_catalog	PRKDC	novel	13509	86	NA	NA	18	-4	any annotated donor/acceptor	TRUE	canonical	0	0	junction_2	222929.40958162502	NA	11	1	TRUE	NA	NA	NA	C	coding	4011	12036	35	12070	20.0	-25	False	AATAAA	-14
PB.6927.2	chr2	+	2732	1	full-splice_match	MARS2	ENST00000282276.7	3019	1	-5	292	-5	-292	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	593	1782	43	1824	35.0	-5	True	AATAAA	-19
PB.11786.3	chr9	-	4748	23	novel_not_in_catalog	GOLGA1	novel	4811	23	NA	NA	127	6	any annotated donor/acceptor	FALSE	canonical	1	13474	junction_22	36493.54862880187	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	266	2569	15.0	20	True	ATTAAA	-37
PB.10627.7	chr7	-	3645	3	novel_not_in_catalog	YWHAG	novel	3750	2	NA	NA	44	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	757996.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	247	744	180	923	15.0	1	True	AATAAA	-13
PB.3153.7	chr13	+	4453	19	full-splice_match	LRCH1	ENST00000311191.10	4710	19	11	246	9	-246	multi-exon	FALSE	canonical	1	94554	junction_4	37104.526615967785	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	219	2309	25.0	9	True	ATTAAA	-18
PB.3153.6	chr13	+	4578	18	novel_in_catalog	LRCH1	novel	4710	19	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	4646	junction_2	54386.683211366755	NA	2	NA	TRUE	NA	NA	NA	C	coding	442	1329	862	2190	30.0	1	True	ATTAAA	-16
PB.3153.5	chr13	+	4830	20	novel_not_in_catalog	LRCH1	novel	4710	19	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	1092	junction_16	62208.70493415281	NA	4	NA	TRUE	NA	NA	NA	C	coding	632	1899	230	2128	30.0	-2	True	ATTAAA	-16
PB.3153.4	chr13	+	4227	19	full-splice_match	LRCH1	ENST00000311191.10	4710	19	481	2	389	-2	multi-exon	FALSE	canonical	1	94554	junction_4	37104.526615967785	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	88	1839	30.0	333	False	ATTAAA	-16
PB.3153.3	chr13	+	3008	19	novel_not_in_catalog	LRCH1	novel	4710	19	NA	NA	-34	1301	any annotated donor/acceptor	FALSE	canonical	1	6542	junction_18	52941.3042518683	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	264	2270	15.0	-4	True	AATAAA	-17
PB.3153.2	chr13	+	2874	19	full-splice_match	LRCH1	ENST00000311191.10	4710	19	113	1723	21	-1723	multi-exon	FALSE	canonical	1	94554	junction_4	37104.526615967785	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	117	2207	70.0	8	True	NA	NA
PB.3153.1	chr13	+	3120	19	full-splice_match	LRCH1	ENST00000311191.10	4710	19	116	1474	24	-1474	multi-exon	FALSE	canonical	1	94554	junction_4	37104.526615967785	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	114	2204	20.0	11	True	ATTAAA	-24
PB.5660.1	chr19	+	4023	8	full-splice_match	ZNF557	ENST00000252840.10	2268	8	257	-2012	-4	-1738	multi-exon	FALSE	canonical	1	58255	junction_3	8552.94756209811	NA	2	NA	TRUE	NA	NA	NA	C	coding	430	1293	245	1537	80.0	-7	True	NA	NA
PB.11123.1	chr8	-	13491	86	full-splice_match	PRKDC	ENST00000314191.6	13509	86	14	4	9	-4	multi-exon	FALSE	canonical	1	333026	junction_85	213277.60154970575	NA	0	NA	TRUE	NA	NA	NA	C	coding	4128	12387	44	12430	20.0	-34	False	AATAAA	-14
PB.3153.9	chr13	+	4332	19	novel_not_in_catalog	LRCH1	novel	4710	19	NA	NA	22347	-1	any annotated donor/acceptor	FALSE	canonical	1	3063	junction_1	51432.231174192275	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	126	1943	25.0	-6787	False	ATTAAA	-17
PB.3153.8	chr13	+	2684	19	novel_not_in_catalog	LRCH1	novel	4710	19	NA	NA	9	1022	any annotated donor/acceptor	FALSE	canonical	1	6542	junction_18	52941.3042518683	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	219	2225	30.0	9	True	AATAAA	-18
PB.5002.2	chr17	+	5357	24	full-splice_match	CNTNAP1	ENST00000264638.8	5276	24	-81	0	-81	0	multi-exon	FALSE	canonical	1	90594	junction_1	58276.92110869673	NA	1	NA	TRUE	NA	NA	NA	C	coding	1383	4152	302	4453	0.0	1	True	TATAAA	-18
PB.5002.3	chr17	+	3238	7	novel_in_catalog	CNTNAP1	novel	5276	24	NA	NA	2370	172	intron_retention	FALSE	canonical	1	200223	junction_2	29723.827365431927	NA	9	2	TRUE	NA	NA	NA	C	coding	408	1227	294	1520	10.0	9412	False	AATAAA	-13
PB.5002.1	chr17	+	5536	24	full-splice_match	CNTNAP1	ENST00000264638.8	5276	24	-82	-178	-82	178	multi-exon	FALSE	canonical	1	90594	junction_1	58276.92110869673	NA	12	1	TRUE	NA	NA	NA	C	coding	1383	4152	303	4454	10.0	0	True	AATAAA	-19
PB.5660.4	chr19	+	3460	9	novel_not_in_catalog	ZNF557	novel	2268	8	NA	NA	4	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	25546.331451098315	NA	3	NA	TRUE	NA	NA	NA	C	coding	430	1293	237	1529	25.0	1	True	NA	NA
PB.9164.4	chr5	-	2498	4	full-splice_match	GOLPH3	ENST00000265070.6	2721	4	25	198	-8	-198	multi-exon	FALSE	canonical	1	747279	junction_3	223182.39763177262	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	292	1188	35.0	-7	True	ATTAAA	-17
PB.11786.2	chr9	-	4940	23	novel_not_in_catalog	GOLGA1	novel	4811	23	NA	NA	8	6	any annotated donor/acceptor	FALSE	canonical	1	23001	junction_22	34975.84042362446	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	458	2761	15.0	-15	True	ATTAAA	-37
PB.9164.2	chr5	-	2555	3	full-splice_match	GOLPH3	ENST00000512668.1	665	3	-7	-1883	-7	-8	multi-exon	FALSE	canonical	1	16507	junction_2	638110.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	291	1055	25.0	-6	True	AATAAA	-32
PB.9164.1	chr5	-	2621	4	full-splice_match	GOLPH3	ENST00000265070.6	2721	4	82	18	34	-18	multi-exon	FALSE	canonical	1	747279	junction_3	223182.39763177262	NA	12	NA	TRUE	NA	NA	NA	C	coding	298	897	235	1131	35.0	50	True	AATAAA	-22
PB.11539.6	chr9	-	6864	8	novel_not_in_catalog	PAX5	novel	8615	10	NA	NA	-7656	-1283	any annotated donor/acceptor	FALSE	canonical	1	772	junction_7	32389.815302760508	NA	0	NA	TRUE	NA	NA	NA	B	coding	168	507	356	862	70.0	8237	False	NA	NA
PB.8292.1	chr3	-	3264	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	80	-8	0	8	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	106	642	30.0	20	True	AATAAA	-25
PB.9425.4	chr5	+	1618	9	full-splice_match	PRRC1	ENST00000296666.12	4699	9	22	3059	-9	-121	multi-exon	TRUE	canonical	1	274967	junction_5	81106.11879112065	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	167	1504	15.0	-9	True	AATGAA	-20
PB.1037.4	chr1	+	2121	11	full-splice_match	RNPEP	ENST00000295640.8	2427	11	304	2	-27	-2	multi-exon	FALSE	canonical	1	352757	junction_1	171947.44182383173	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	352	1692	30.0	-436	False	AATAAA	-22
PB.1037.5	chr1	+	2086	11	novel_in_catalog	RNPEP	novel	847	7	NA	NA	-13	-6	combination_of_known_junctions	FALSE	canonical	1	19592	junction_1	253284.26222805475	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	102	1661	30.0	-2	True	AATAAA	-18
PB.1037.2	chr1	+	2297	10	novel_in_catalog	RNPEP	novel	847	7	NA	NA	-32	-13	combination_of_known_junctions	FALSE	canonical	1	19637	junction_2	281941.92175576393	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	824	1879	45.0	-772	False	AATAAA	-11
PB.1037.3	chr1	+	2364	11	novel_not_in_catalog	RNPEP	novel	847	7	NA	NA	-14	-13	any annotated donor/acceptor	FALSE	canonical	1	6454	junction_1	256761.16074330633	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	30	1946	45.0	-10	True	AATAAA	-11
PB.1037.1	chr1	+	2333	10	novel_in_catalog	RNPEP	novel	847	7	NA	NA	-33	-13	combination_of_known_junctions	FALSE	canonical	1	5982	junction_5	268155.843950012	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	77	1915	45.0	-773	False	AATAAA	-11
PB.7316.1	chr20	+	1280	13	full-splice_match	DNTTIP1	ENST00000372622.7	1290	13	2	8	2	-8	multi-exon	FALSE	canonical	1	223241	junction_1	150198.03474216873	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	67	1056	15.0	-15	True	ATTAAA	-20
PB.11170.3	chr8	-	1476	9	novel_not_in_catalog	PPP1R42	novel	610	4	NA	NA	-5535	-28563	intron_retention	FALSE	canonical	1	32278	junction_2	384296.26742997306	NA	0	NA	TRUE	NA	NA	NA	B	coding	197	594	344	937	40.0	-7	True	AATAAA	-8
PB.11786.1	chr9	-	4803	23	full-splice_match	GOLGA1	ENST00000373555.8	4811	23	15	-7	15	7	multi-exon	FALSE	canonical	1	35466	junction_22	33064.83347124865	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	320	2623	15.0	-8	True	ATTAAA	-38
PB.10673.20	chr7	-	1899	4	incomplete-splice_match	CDK6	ENST00000424848.2	1465	8	4	109604	4	-53509	3prime_fragment	FALSE	canonical	1	138387	junction_3	76715.54492336536	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	481	1047	85.0	-22	True	AAAAAG	-33
PB.10656.10	chr7	+	3374	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	38	4119	7	1446	multi-exon	FALSE	canonical	1	133354	junction_4	59149.77586966918	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	29	1192	60.0	-2	True	NA	NA
PB.10776.4	chr7	+	3130	12	novel_in_catalog	HBP1	novel	2704	11	NA	NA	3	-9	no_combination_of_known_junctions	FALSE	canonical	1	1558	junction_1	221057.65477351588	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	497	2041	20.0	0	True	AATAAA	-18
PB.7986.1	chr3	+	2966	2	novel_not_in_catalog	CMC1	novel	3749	3	NA	NA	-6	-70225	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	coding	32	99	263	361	75.0	-8	True	CATAAA	-18
PB.457.3	chr1	+	5258	21	novel_not_in_catalog	LEPROT	novel	492	3	NA	NA	-21	199424	any annotated donor/acceptor	FALSE	canonical	1	658	junction_3	58911.796200336656	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	306	2996	10.0	-54	True	TATAAA	-18
PB.10776.7	chr7	+	2811	11	novel_not_in_catalog	HBP1	novel	2704	11	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	684	junction_9	209609.8996031676	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	199	1716	20.0	0	True	AATAAA	-24
PB.3143.1	chr13	+	1391	8	full-splice_match	GTF2F2	ENST00000340473.7	2239	8	-46	894	-46	-894	multi-exon	FALSE	canonical	1	42509	junction_2	216782.48756657218	NA	1	1	TRUE	NA	NA	NA	C	coding	249	750	188	937	40.0	-41	True	AATAAA	-30
PB.3143.2	chr13	+	2093	8	full-splice_match	GTF2F2	ENST00000340473.7	2239	8	-45	191	-45	-191	multi-exon	FALSE	canonical	1	42509	junction_2	216782.48756657218	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	187	936	65.0	-40	True	AATAAA	-21
PB.3143.3	chr13	+	2258	8	full-splice_match	GTF2F2	ENST00000340473.7	2239	8	-42	23	-42	-23	multi-exon	FALSE	canonical	1	42509	junction_2	216782.48756657218	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	184	933	35.0	-37	True	AATAAA	-10
PB.8890.8	chr4	+	6588	10	novel_in_catalog	METAP1	novel	2791	11	NA	NA	-9	-5	intron_retention	FALSE	canonical	1	359066	junction_2	95876.65326956735	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	4279	5097	30.0	10	True	ATTAAA	-20
PB.8890.9	chr4	+	2821	13	novel_in_catalog	METAP1	novel	2791	11	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	2242	junction_6	254844.7385100387	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	513	1331	30.0	19	True	ATTAAA	-19
PB.1392.8	chr10	+	4245	11	novel_in_catalog	ALOX5	novel	2390	13	NA	NA	17	-2	intron_retention	FALSE	canonical	1	216830	junction_9	46177.8199551473	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	88	1542	25.0	2	True	AATAAA	-12
PB.1392.9	chr10	+	2795	13	novel_not_in_catalog	ALOX5	novel	2390	13	NA	NA	17	-3	intron_retention	FALSE	canonical	1	3367	junction_6	90495.46261968055	NA	3	NA	TRUE	NA	NA	NA	C	coding	279	840	88	927	25.0	2	True	AATAAA	-11
PB.2294.4	chr11	-	2186	13	novel_in_catalog	ZPR1	novel	6566	14	NA	NA	13	-841	intron_retention	FALSE	canonical	1	187020	junction_8	155737.9265582622	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	37	894	10.0	4393	False	AATAAA	-12
PB.2294.5	chr11	-	1805	14	novel_not_in_catalog	ZPR1	novel	6566	14	NA	NA	18	-841	any annotated donor/acceptor	FALSE	canonical	1	2055	junction_13	185716.5288544654	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	32	1441	10.0	-19	True	AATAAA	-12
PB.1392.4	chr10	+	2734	7	incomplete-splice_match	ALOX5	ENST00000542434.5	2390	13	1	15705	1	1928	3prime_fragment	FALSE	canonical	1	217492	junction_6	45083.734341100106	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	104	1171	80.0	-14	True	NA	NA
PB.1392.5	chr10	+	2461	14	novel_not_in_catalog	ALOX5	novel	2390	13	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	8632	junction_9	87291.8548888774	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	97	2034	20.0	-7	True	AATAAA	-13
PB.1392.2	chr10	+	3085	4	incomplete-splice_match	ALOX5	ENST00000542434.5	2390	13	-1	31380	-1	-13747	3prime_fragment	FALSE	canonical	1	280482	junction_1	28934.928938337944	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	106	663	60.0	-16	True	NA	NA
PB.2294.1	chr11	-	2629	14	full-splice_match	ZPR1	ENST00000227322.7	6566	14	27	3910	16	11	multi-exon	TRUE	canonical	1	187020	junction_9	161638.04084435073	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	34	1413	20.0	-21	True	AATAAA	-30
PB.2294.2	chr11	-	2148	14	full-splice_match	ZPR1	ENST00000227322.7	6566	14	27	4391	16	-470	multi-exon	FALSE	canonical	1	187020	junction_9	161638.04084435073	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	34	1413	30.0	-21	True	NA	NA
PB.2294.3	chr11	-	1766	14	full-splice_match	ZPR1	ENST00000227322.7	6566	14	39	4761	-22	-840	multi-exon	FALSE	canonical	1	187020	junction_9	161638.04084435073	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	22	1401	5.0	-9	True	AATAAA	-13
PB.7411.6	chr20	+	1283	7	full-splice_match	BIRC7	ENST00000342412.10	1302	7	22	-3	22	3	multi-exon	FALSE	canonical	1	4760	junction_5	7853.508566593376	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	193	1035	25.0	-28	True	AATAAA	-24
PB.10874.1	chr7	-	6209	4	novel_not_in_catalog	ZC3HAV1L	novel	1753	5	NA	NA	-14	4208	intron_retention	TRUE	canonical	1	6938	junction_1	35647.91681929753	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	27	857	15.0	-4	True	AATAAA	-17
PB.7004.10	chr2	-	2587	14	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	773	junction_12	679716.0672607367	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	379	1314	30.0	1	True	AATAAA	-17
PB.7004.11	chr2	-	2474	13	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	48138	junction_12	608549.3973804233	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	266	1201	30.0	-12	True	AATAAA	-17
PB.10776.2	chr7	+	2414	9	incomplete-splice_match	HBP1	ENST00000468410.5	2704	11	23	5387	-6	-1	3prime_fragment	FALSE	canonical	1	61873	junction_1	182277.54092416153	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	30	1448	10.0	-1062	False	AATAAA	-21
PB.10874.2	chr7	-	6151	4	novel_in_catalog	ZC3HAV1L	novel	1753	5	NA	NA	-43	4208	intron_retention	FALSE	canonical	1	77534	junction_1	3579.9449095699165	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	56	952	15.0	-33	True	AATAAA	-17
PB.3160.1	chr13	-	3519	1	novel_in_catalog	LPAR6	novel	1651	11	NA	NA	-629	1445	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	319	960	771	1730	100.0	-6	True	NA	NA
PB.3160.3	chr13	-	2101	1	novel_in_catalog	LPAR6	novel	1651	11	NA	NA	-643	13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	319	960	785	1744	30.0	-20	False	NA	NA
PB.3160.2	chr13	-	2220	1	novel_in_catalog	LPAR6	novel	1651	11	NA	NA	-629	146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	319	960	771	1730	60.0	-6	True	AATAAA	-18
PB.3160.5	chr13	-	1378	1	novel_in_catalog	LPAR6	novel	1651	11	NA	NA	-629	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	202	606	771	1376	40.0	-6	True	AATAAA	-16
PB.3160.4	chr13	-	2135	1	novel_in_catalog	LPAR6	novel	1651	11	NA	NA	-785	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	319	960	927	1886	35.0	-162	False	ATTAAA	-17
PB.11786.7	chr9	-	4812	22	novel_not_in_catalog	GOLGA1	novel	4811	23	NA	NA	110	-851	intron_retention	FALSE	canonical	1	8742	junction_1	46929.39907573905	NA	4	2	TRUE	NA	NA	NA	C	coding	280	843	2073	2915	70.0	3	True	NA	NA
PB.2240.13	chr11	-	3926	5	full-splice_match	CCDC82	ENST00000530106.2	3972	5	51	-5	-14	5	multi-exon	FALSE	canonical	1	95894	junction_4	108191.88996032697	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	201	1235	15.0	-6	True	NA	NA
PB.2240.12	chr11	-	2498	10	novel_in_catalog	CCDC82	novel	2941	9	NA	NA	-9	-9	intron_retention	FALSE	canonical	1	10478	junction_9	89691.55799959693	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	675	2309	45.0	-1	True	ATTAAA	-14
PB.2240.11	chr11	-	2022	10	full-splice_match	CCDC82	ENST00000646818.1	2754	10	56	676	-7	-4	multi-exon	FALSE	canonical	1	95894	junction_9	73427.96739225474	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	194	1828	40.0	1	True	ATTAAA	-19
PB.2240.10	chr11	-	2277	10	full-splice_match	CCDC82	ENST00000646818.1	2754	10	27	450	-4	24	multi-exon	FALSE	canonical	1	95894	junction_9	73427.96739225474	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	223	1857	20.0	17	False	ATTAAA	-16
PB.2240.15	chr11	-	3328	1	novel_in_catalog	CCDC82	novel	2754	10	NA	NA	7	555	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-13	True	NA	NA
PB.2240.14	chr11	-	2997	5	full-splice_match	CCDC82	ENST00000530106.2	3972	5	73	902	4	-902	multi-exon	FALSE	canonical	1	95894	junction_4	108191.88996032697	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	179	1213	30.0	16	True	AATAAA	-16
PB.6635.8	chr2	+	2669	18	novel_in_catalog	NCAPH	novel	2763	18	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	1	35583	junction_13	79187.81414755133	NA	7	1	TRUE	NA	NA	NA	C	coding	710	2133	49	2181	35.0	-19	True	AATAAA	-22
PB.10874.6	chr7	-	3794	4	novel_in_catalog	ZC3HAV1L	novel	1753	5	NA	NA	-37	1857	intron_retention	FALSE	canonical	1	77534	junction_1	3579.9449095699165	NA	5	NA	TRUE	NA	NA	NA	C	coding	298	897	50	946	25.0	-27	True	NA	NA
PB.11008.6	chr8	-	5371	4	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	17197.646376434448	NA	28	1	TRUE	NA	NA	NA	C	coding	487	1464	353	1816	20.0	5	True	AATAAA	-23
PB.472.19	chr1	-	2465	12	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	-4	179	no_combination_of_known_junctions	FALSE	canonical	1	30030	junction_1	60110.81817363771	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	319	1773	30.0	-5	True	ATTAAA	-26
PB.11008.7	chr8	-	5646	4	novel_not_in_catalog	LZTS1	novel	5459	3	NA	NA	-13070	-4	intron_retention	FALSE	canonical	1	1144	junction_3	19400.483264313003	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	303	2093	20.0	5172	False	AATAAA	-21
PB.9364.1	chr5	+	3221	1	antisense	novelGene_ST8SIA4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9425.8	chr5	+	1878	9	full-splice_match	PRRC1	ENST00000296666.12	4699	9	31	2790	0	148	multi-exon	FALSE	canonical	1	274967	junction_5	81106.11879112065	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	158	1495	30.0	0	True	ATTAAA	-24
PB.8564.1	chr3	+	2953	7	novel_in_catalog	FAM131A	novel	1335	7	NA	NA	-30	1	intron_retention	FALSE	canonical	1	63448	junction_2	70967.06812474517	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	549	1649	30.0	-4444	False	ATTAAA	-28
PB.6851.3	chr2	-	4273	15	novel_not_in_catalog	ATF2	novel	4176	14	NA	NA	16	-2	intron_retention	FALSE	canonical	1	316	junction_10	147475.62019326366	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	549	1916	15.0	12	True	AATAAA	-24
PB.9486.1	chr5	-	2618	1	full-splice_match	PROB1	ENST00000434752.3	5122	1	2498	6	2498	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	210	633	550	1182	30.0	1930	False	AATAAA	-28
PB.8564.3	chr3	+	2576	7	full-splice_match	FAM131A	ENST00000450976.5	1335	7	0	-1241	0	1	multi-exon	FALSE	canonical	1	53561	junction_2	73102.29343814506	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	427	1272	30.0	-3	True	ATTAAA	-28
PB.7615.3	chr22	+	1579	6	full-splice_match	COMT	ENST00000403710.5	1548	6	23	-54	3	-4	multi-exon	FALSE	canonical	1	38019	junction_2	921895.3593813997	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	488	1303	45.0	24	True	TATAAA	-17
PB.5331.8	chr17	-	2689	11	novel_in_catalog	PCYT2	novel	5147	13	NA	NA	-2	6	intron_retention	FALSE	canonical	1	232143	junction_10	123991.0919664796	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	66	731	15.0	-22	True	AAAACA	-27
PB.2531.8	chr12	-	3031	6	full-splice_match	SINHCAF	ENST00000454658.6	1555	6	-7	-1469	-7	-9	multi-exon	TRUE	canonical	1	14570	junction_4	44673.33026045853	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	247	912	45.0	-11	True	AATAAA	-15
PB.8037.4	chr3	+	6775	6	novel_not_in_catalog	ZNF621	novel	1979	5	NA	NA	2	-242	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	46805.65461309135	NA	18	NA	TRUE	NA	NA	NA	C	coding	438	1317	438	1754	25.0	0	True	NA	NA
PB.11696.15	chr9	+	5437	25	full-splice_match	SMC2	ENST00000374787.7	4266	25	1	-1172	1	-586	multi-exon	FALSE	canonical	1	48498	junction_1	68856.61044276481	NA	1	1	TRUE	NA	NA	NA	C	coding	1197	3594	336	3929	25.0	-62	True	ATTAAA	-28
PB.480.4	chr1	+	7536	29	novel_not_in_catalog	ACADM	novel	546	5	NA	NA	35805	151847	intron_retention	TRUE	non_canonical	0	0	junction_28	373665.285219593	NA	6	NA	TRUE	NA	NA	NA	C	coding	360	1083	5397	6479	40.0	0	True	AATAAA	-14
PB.6851.2	chr2	-	4219	15	full-splice_match	ATF2	ENST00000428760.5	1989	15	-8	-2222	-8	-2	multi-exon	FALSE	canonical	1	25491	junction_2	139863.31626089415	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	271	1458	15.0	22	True	AATAAA	-24
PB.11549.9	chr9	+	3370	6	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	243	1	combination_of_known_junctions	FALSE	canonical	1	46603	junction_2	55493.18537766596	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	71	1552	100.0	0	True	NA	NA
PB.2577.10	chr12	-	2093	8	full-splice_match	CCNT1	ENST00000417344.2	2017	8	-78	2	-34	-2	multi-exon	FALSE	canonical	1	42899	junction_2	59778.99821775509	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1323	770	2092	75.0	-47	True	NA	NA
PB.8037.7	chr3	+	2881	6	novel_not_in_catalog	ZNF621	novel	1979	5	NA	NA	-2	-241	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	38202.91370772653	NA	1	1	TRUE	NA	NA	NA	C	coding	439	1320	357	1676	30.0	21	True	NA	NA
PB.11696.13	chr9	+	4114	25	novel_not_in_catalog	SMC2	novel	5992	25	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	3468	junction_1	76379.51866406444	NA	1	NA	TRUE	NA	NA	NA	C	coding	1197	3594	185	3778	30.0	-65	True	ATTAAA	-16
PB.11696.12	chr9	+	2678	18	incomplete-splice_match	SMC2	ENST00000374787.7	4266	25	-13	14668	-13	-14668	3prime_fragment	TRUE	canonical	1	48498	junction_1	75774.41707415067	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	350	2677	70.0	-93	False	ACTAAA	-41
PB.11786.4	chr9	-	4624	22	novel_in_catalog	GOLGA1	novel	4811	23	NA	NA	96	5	no_combination_of_known_junctions	FALSE	canonical	1	2664	junction_11	45147.305026858565	NA	2	NA	TRUE	NA	NA	NA	C	coding	735	2208	239	2446	15.0	-11	True	ATTAAA	-36
PB.8037.6	chr3	+	2290	5	full-splice_match	ZNF621	ENST00000403205.6	1979	5	82	-393	-23	-152	multi-exon	FALSE	canonical	1	16791	junction_1	32864.63972493841	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	142	1461	80.0	0	True	AAAAAG	-9
PB.7615.4	chr22	+	2486	6	full-splice_match	COMT	ENST00000403710.5	1548	6	33	-971	13	-46	multi-exon	FALSE	canonical	1	38019	junction_2	921895.3593813997	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	478	1293	40.0	34	True	AAAAAG	-35
PB.8292.7	chr3	-	3230	5	full-splice_match	GCSAM	ENST00000460387.6	623	5	3	-2610	3	-4	multi-exon	FALSE	canonical	1	2221	junction_3	104085.37741921292	NA	2	NA	TRUE	NA	NA	NA	C	coding	163	492	129	620	35.0	-3	True	AATAAA	-13
PB.8037.1	chr3	+	4578	5	full-splice_match	ZNF621	ENST00000339296.9	6378	5	-6	1806	1	-1806	multi-exon	FALSE	canonical	1	69020	junction_2	17403.950054513487	NA	3	NA	TRUE	NA	NA	NA	C	coding	439	1320	459	1778	75.0	-9610	False	NA	NA
PB.8080.32	chr3	-	3494	15	incomplete-splice_match	SMARCC1	ENST00000254480.9	6375	28	26	93222	-10	-298	3prime_fragment	FALSE	canonical	1	438864	junction_14	142838.59330157394	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	95	1555	25.0	1	True	AATAAA	-12
PB.3954.1	chr15	-	1803	8	novel_not_in_catalog	TLE3	novel	6004	20	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	170356.93349421097	NA	11	1	TRUE	NA	NA	NA	A	coding	344	1035	474	1508	20.0	3	True	AATAGA	-34
PB.3334.1	chr14	+	1183	8	incomplete-splice_match	DHRS2	ENST00000250383.10	1705	9	2573	3	92	-1	5prime_fragment	FALSE	canonical	1	289591	junction_2	107490.02051998947	NA	0	NA	TRUE	NA	NA	NA	A	coding	258	777	24	800	25.0	-5208	False	AATAAA	-15
PB.4366.1	chr16	-	2500	9	full-splice_match	TBC1D10B	ENST00000409939.7	3350	9	848	2	848	-2	multi-exon	FALSE	canonical	1	302373	junction_8	72138.39243946319	NA	0	NA	TRUE	NA	NA	NA	A	coding	533	1602	59	1660	0.0	9715	False	NA	NA
PB.6851.1	chr2	-	4266	13	full-splice_match	ATF2	ENST00000345739.9	4079	13	-45	-142	-45	142	multi-exon	FALSE	canonical	1	128401	junction_9	98023.04596751725	NA	8	NA	TRUE	NA	NA	NA	C	coding	442	1329	437	1765	15.0	92	False	GATAAA	-24
PB.8037.2	chr3	+	2479	4	full-splice_match	ZNF621	ENST00000431278.5	2613	4	-8	142	5	-142	multi-exon	FALSE	canonical	1	21220	junction_2	39346.89680549436	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	426	1640	60.0	-10	True	AATAAA	-4
PB.10925.5	chr7	-	2746	3	full-splice_match	GIMAP6	ENST00000493969.2	876	3	-24	-1846	15	-452	multi-exon	FALSE	canonical	1	32957	junction_1	83699.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	212	639	219	857	25.0	-7	True	AATAAA	-21
PB.10925.4	chr7	-	2985	3	full-splice_match	GIMAP6	ENST00000328902.9	3440	3	0	455	0	-452	multi-exon	FALSE	canonical	1	132527	junction_1	33914.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	218	1096	25.0	-22	True	AATAAA	-21
PB.10925.2	chr7	-	3217	3	full-splice_match	GIMAP6	ENST00000493969.2	876	3	-43	-2298	-4	0	multi-exon	FALSE	canonical	1	32957	junction_1	83699.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	212	639	238	876	20.0	-26	True	ATTAAA	-20
PB.10925.1	chr7	-	3437	3	full-splice_match	GIMAP6	ENST00000328902.9	3440	3	0	3	0	0	multi-exon	FALSE	canonical	1	132527	junction_1	33914.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	218	1096	20.0	-22	True	ATTAAA	-20
PB.308.11	chr1	+	2310	6	novel_not_in_catalog	AKIRIN1	novel	2741	5	NA	NA	-2	-170	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	259547.18617499978	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	96	674	20.0	-2	True	AATAAA	-19
PB.620.1	chr1	-	1127	6	full-splice_match	RHOC	ENST00000339083.11	1418	6	270	21	0	0	multi-exon	FALSE	canonical	1	539724	junction_5	1595690.1490173335	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	133	714	5.0	-7	True	AATAAA	-20
PB.5263.9	chr17	-	2208	14	full-splice_match	ACOX1	ENST00000293217.9	7514	14	164	5142	-22	-72	multi-exon	FALSE	canonical	1	159801	junction_12	70720.52015926942	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	127	2109	30.0	0	True	NA	NA
PB.5263.8	chr17	-	2308	14	full-splice_match	ACOX1	ENST00000293217.9	7514	14	183	5023	-3	0	multi-exon	FALSE	canonical	1	159801	junction_12	70720.52015926942	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	108	2090	55.0	215	False	NA	NA
PB.11725.2	chr9	+	3872	4	full-splice_match	KIAA1958	ENST00000337530.10	11775	4	9	7894	9	-3806	multi-exon	FALSE	canonical	1	29869	junction_2	3942.141239929838	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	288	2438	40.0	6	True	NA	NA
PB.1996.1	chr11	-	3285	2	full-splice_match	INTS5	ENST00000330574.2	3285	2	-4	4	-4	-4	multi-exon	FALSE	canonical	1	120318	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	1019	3060	58	3117	15.0	-5	True	AATAAA	-19
PB.11725.1	chr9	+	4384	3	full-splice_match	KIAA1958	ENST00000374244.3	2643	3	-165	-1576	3	1576	multi-exon	FALSE	canonical	1	23976	junction_2	3765.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	294	2510	95.0	0	True	NA	NA
PB.5263.3	chr17	-	4878	15	novel_not_in_catalog	ACOX1	novel	7514	14	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	108243.04256109327	NA	3	NA	TRUE	NA	NA	NA	C	coding	660	1983	107	2089	20.0	216	False	AATAAA	-14
PB.5263.2	chr17	-	5983	14	full-splice_match	ACOX1	ENST00000293217.9	7514	14	169	1362	-17	9	multi-exon	FALSE	canonical	1	159801	junction_12	70720.52015926942	NA	17	NA	TRUE	NA	NA	NA	C	coding	660	1983	122	2104	40.0	201	False	AATAAA	-24
PB.5263.1	chr17	-	4459	15	novel_not_in_catalog	ACOX1	novel	7514	14	NA	NA	-18	-6	any annotated donor/acceptor	FALSE	canonical	1	407	junction_1	108161.62571120035	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	123	2105	45.0	4	True	NA	NA
PB.5263.7	chr17	-	3011	14	full-splice_match	ACOX1	ENST00000293217.9	7514	14	231	4272	2	685	multi-exon	FALSE	canonical	1	159801	junction_12	70720.52015926942	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	60	2042	85.0	1	True	NA	NA
PB.5263.6	chr17	-	3319	13	novel_in_catalog	ACOX1	novel	7514	14	NA	NA	-44	879	combination_of_known_junctions	FALSE	canonical	1	9796	junction_11	103340.70446918532	NA	5	NA	TRUE	NA	NA	NA	C	coding	419	1260	897	2156	40.0	-12	True	AATACA	-19
PB.5263.5	chr17	-	3275	14	full-splice_match	ACOX1	ENST00000293217.9	7514	14	168	4071	-18	886	multi-exon	FALSE	canonical	1	159801	junction_12	70720.52015926942	NA	23	1	TRUE	NA	NA	NA	C	coding	660	1983	123	2105	25.0	4	True	AATACA	-26
PB.5263.4	chr17	-	4366	14	full-splice_match	ACOX1	ENST00000293217.9	7514	14	3	3145	3	-1773	multi-exon	FALSE	canonical	1	159801	junction_12	70720.52015926942	NA	4	NA	TRUE	NA	NA	NA	C	coding	660	1983	288	2270	35.0	35	False	AATAAA	-16
PB.4310.7	chr16	-	4751	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_1	182503.48932486432	NA	3	NA	TRUE	NA	NA	NA	C	coding	613	1842	89	1930	20.0	-6	True	AATAAA	-18
PB.4310.6	chr16	-	5194	17	full-splice_match	GGA2	ENST00000309859.8	5973	17	0	779	0	2	multi-exon	FALSE	canonical	1	350013	junction_16	124237.22461080694	NA	2	NA	TRUE	NA	NA	NA	C	coding	613	1842	84	1925	25.0	-1	True	AATAAA	-19
PB.4310.5	chr16	-	4612	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_1	182503.48932486432	NA	2	NA	TRUE	NA	NA	NA	C	coding	613	1842	84	1925	25.0	-1	True	AATAAA	-19
PB.4310.4	chr16	-	4704	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	-5	2	intron_retention	FALSE	non_canonical	0	0	junction_1	182503.48932486432	NA	2	NA	TRUE	NA	NA	NA	C	coding	613	1842	89	1930	25.0	-6	True	AATAAA	-19
PB.4310.3	chr16	-	6038	16	novel_in_catalog	GGA2	novel	5973	17	NA	NA	0	8	intron_retention	FALSE	canonical	1	350013	junction_15	126679.40728282908	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	1183	2763	15.0	5	True	AATAAA	-25
PB.4310.2	chr16	-	5651	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	-2	1323	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	182503.48932486432	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	80	1921	20.0	3	True	AATAAA	-18
PB.4310.1	chr16	-	3699	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	0	1324	intron_retention	FALSE	non_canonical	0	0	junction_1	182503.48932486432	NA	3	NA	TRUE	NA	NA	NA	C	coding	613	1842	84	1925	20.0	-1	True	AATAAA	-19
PB.8459.6	chr3	+	3660	16	novel_in_catalog	HPS3	novel	4665	17	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	2250	junction_8	82625.25307246501	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	86	1600	25.0	-13	True	AATAAA	-23
PB.8459.9	chr3	+	3943	18	novel_not_in_catalog	HPS3	novel	4665	17	NA	NA	13	-2	any annotated donor/acceptor	FALSE	canonical	1	152	junction_11	101115.15690719557	NA	3	1	TRUE	NA	NA	NA	C	coding	794	2385	73	2457	25.0	0	True	AATAAA	-22
PB.3208.26	chr13	-	2478	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	182	1811	-103	58	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	242	1570	15.0	-5	True	ATTAAA	-26
PB.5322.1	chr17	-	1589	1	full-splice_match	OXLD1	ENST00000575963.1	1600	1	10	1	8	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-38	True	AATAAA	-23
PB.3208.23	chr13	-	3066	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	287	1118	2	-191	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	137	1465	45.0	1	True	AATAAA	-29
PB.3208.21	chr13	-	3665	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	184	622	-101	305	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	240	1568	55.0	-3	True	AATAAA	-21
PB.4310.8	chr16	-	4673	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	182503.48932486432	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	82	1923	20.0	1	True	AATAAA	-17
PB.6497.20	chr2	+	5184	24	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	135139	junction_1	81344.72975805015	NA	0	NA	TRUE	NA	NA	NA	C	coding	1196	3591	610	4200	25.0	0	True	AATAAA	-21
PB.6851.7	chr2	-	4150	14	full-splice_match	ATF2	ENST00000456655.5	1861	14	-36	-2253	1	-2	multi-exon	FALSE	canonical	1	25491	junction_2	152395.32644591242	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	391	1389	15.0	-6	True	AATAAA	-24
PB.9548.8	chr5	+	3901	22	full-splice_match	FBXO38	ENST00000394370.7	4132	22	-44	275	6	-266	multi-exon	FALSE	canonical	1	60307	junction_15	55427.65601727319	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	146	3487	0.0	0	True	AGTAAA	-15
PB.6497.22	chr2	+	3603	19	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	17	-72	intron_retention	FALSE	canonical	1	135139	junction_1	67326.3419110718	NA	2	NA	TRUE	NA	NA	NA	C	coding	1004	3012	590	3601	60.0	-130	False	AATACA	-10
PB.11232.2	chr8	+	3285	8	full-splice_match	OTUD6B	ENST00000615618.1	3434	8	117	32	-12	-32	multi-exon	FALSE	canonical	1	22523	junction_3	86043.08844659501	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	516	1094	80.0	-31	True	NA	NA
PB.6786.4	chr2	-	3915	25	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	0	978	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	321538.5117770584	NA	3	1	TRUE	NA	NA	NA	B	coding	719	2160	778	2937	25.0	-1	True	ATTAAA	-17
PB.6497.23	chr2	+	3341	17	incomplete-splice_match	EHBP1	ENST00000431489.5	5076	23	32	52924	32	-413	3prime_fragment	FALSE	canonical	1	131027	junction_15	50596.01584144095	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2766	575	3340	55.0	-15	True	NA	NA
PB.10385.1	chr7	-	4889	17	novel_not_in_catalog	RNF216	novel	5639	17	NA	NA	0	-1144	any annotated donor/acceptor	FALSE	canonical	1	38611	junction_13	91733.7594989571	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	1754	3220	95.0	-1	True	NA	NA
PB.9091.8	chr4	-	2479	7	novel_in_catalog	CASP3	novel	2624	7	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	7142	junction_5	155637.07680414358	NA	1	1	TRUE	NA	NA	NA	C	coding	182	549	198	746	40.0	-1	True	AATATA	-12
PB.9091.6	chr4	-	2546	7	full-splice_match	CASP3	ENST00000517513.5	964	7	-29	-1553	-1	-7	multi-exon	FALSE	canonical	1	15812	junction_1	143873.10896112202	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	265	813	40.0	-30	False	AATATA	-12
PB.9091.7	chr4	-	2472	7	full-splice_match	CASP3	ENST00000523916.5	2540	7	61	7	-1	-7	multi-exon	FALSE	canonical	1	153306	junction_6	86763.88502856473	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	70	903	40.0	-2	True	AATATA	-12
PB.9091.4	chr4	-	2381	6	full-splice_match	CASP3	ENST00000393588.8	677	6	-20	-1684	0	-4	multi-exon	FALSE	canonical	1	15812	junction_1	137589.82356206438	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	97	645	25.0	-29	False	AATATA	-15
PB.9091.5	chr4	-	2976	10	novel_not_in_catalog	CASP3	novel	2624	7	NA	NA	0	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	170001.06006009362	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	574	1407	40.0	-1	True	AATATA	-12
PB.9091.2	chr4	-	2641	8	full-splice_match	CASP3	ENST00000308394.8	2673	8	28	4	0	-4	multi-exon	FALSE	canonical	1	76068	junction_6	127108.43986798624	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	236	1069	25.0	-1	True	AATATA	-15
PB.9091.3	chr4	-	2631	8	novel_in_catalog	CASP3	novel	2624	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	7142	junction_6	143986.20259395888	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	226	1059	25.0	-29	False	AATATA	-15
PB.9091.1	chr4	-	4009	6	novel_in_catalog	CASP3	novel	2624	7	NA	NA	0	-4	intron_retention	FALSE	canonical	1	153306	junction_5	91913.7021550106	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	69	752	25.0	-1	True	AATATA	-15
PB.1607.1	chr10	+	2866	5	full-splice_match	LZTS2	ENST00000370223.7	2883	5	-22	39	-22	-39	multi-exon	FALSE	canonical	1	53274	junction_1	184288.6309113709	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	228	2237	85.0	-24	True	NA	NA
PB.1607.3	chr10	+	3024	5	novel_in_catalog	LZTS2	novel	816	3	NA	NA	-18	-9	combination_of_known_junctions	FALSE	canonical	1	5800	junction_1	204162.076399334	NA	2	NA	TRUE	NA	NA	NA	C	coding	669	2010	356	2365	45.0	-1154	False	ATTAAA	-16
PB.1607.2	chr10	+	2813	5	novel_in_catalog	LZTS2	novel	816	3	NA	NA	-69	-39	combination_of_known_junctions	FALSE	canonical	1	4161	junction_1	204850.59911127915	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	175	2184	85.0	0	True	NA	NA
PB.1607.4	chr10	+	2774	5	novel_in_catalog	LZTS2	novel	816	3	NA	NA	38	-8	combination_of_known_junctions	FALSE	canonical	1	132793	junction_1	151409.96596740256	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	105	2114	45.0	68	False	ATTAAA	-17
PB.6497.27	chr2	+	4448	22	novel_not_in_catalog	EHBP1	novel	4108	23	NA	NA	30211	-3	intron_retention	FALSE	canonical	1	519	junction_1	99339.9772947231	NA	0	NA	TRUE	NA	NA	NA	C	coding	1040	3123	342	3464	25.0	-32	True	AATAAA	-21
PB.1786.1	chr11	-	2720	14	full-splice_match	APBB1	ENST00000311051.7	2619	14	-100	-1	-100	0	multi-exon	TRUE	canonical	1	24805	junction_13	200140.67787951307	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	184	2310	5.0	-62	False	AATAAA	-17
PB.9548.1	chr5	+	3691	21	full-splice_match	FBXO38	ENST00000296701.10	3680	21	-2	-9	-2	0	multi-exon	FALSE	canonical	1	48980	junction_14	58064.42381915108	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	171	3002	15.0	-58	False	AATAAA	-18
PB.1716.4	chr10	+	3049	10	incomplete-splice_match	GLRX3	ENST00000331244.9	1302	11	9	2496	9	-2496	3prime_fragment	FALSE	canonical	1	151232	junction_8	248212.39955393242	NA	3	NA	TRUE	NA	NA	NA	C	coding	327	984	14	997	10.0	9	True	ATTAAA	-18
PB.1786.2	chr11	-	3036	13	novel_in_catalog	APBB1	novel	1907	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	285557	junction_12	146395.78920883068	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	108	1499	5.0	-10	True	AATAAA	-16
PB.1716.2	chr10	+	1240	11	full-splice_match	GLRX3	ENST00000331244.9	1302	11	1	61	1	-61	multi-exon	FALSE	canonical	1	151232	junction_8	245396.82059969727	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	22	1029	60.0	1	True	AATAAA	-16
PB.1716.3	chr10	+	2835	10	incomplete-splice_match	GLRX3	ENST00000331244.9	1302	11	7	2712	7	-2712	3prime_fragment	FALSE	canonical	1	151232	junction_8	248212.39955393242	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	16	999	20.0	7	True	AATAAA	-21
PB.1716.1	chr10	+	3831	12	full-splice_match	GLRX3	ENST00000368644.5	3827	12	-9	5	-9	-5	multi-exon	FALSE	canonical	1	151232	junction_8	245255.16986454997	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	32	1039	15.0	-9	True	AATAAA	-42
PB.833.1	chr1	-	1449	3	novel_not_in_catalog	HDGF	novel	2380	6	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_2	685704.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	43	360	25.0	733	False	AATAAA	-15
PB.2748.1	chr12	-	1551	3	novel_in_catalog	AC090061.1	novel	1733	3	NA	NA	-8	-164	combination_of_known_junctions	FALSE	canonical	1	9133	junction_1	2937.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	-30	True	NA	NA
PB.833.4	chr1	-	2268	7	novel_in_catalog	HDGF	novel	2380	6	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	80432	junction_4	1566272.5518439205	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	138	500	25.0	899	False	AATAAA	-14
PB.9548.3	chr5	+	4409	22	full-splice_match	FBXO38	ENST00000340253.9	4424	22	15	0	-2	0	multi-exon	FALSE	canonical	1	145490	junction_4	46678.460598452366	NA	0	NA	TRUE	NA	NA	NA	C	coding	1188	3567	154	3720	15.0	-8	True	AATAAA	-18
PB.833.6	chr1	-	2310	3	novel_not_in_catalog	HDGF	novel	2380	6	NA	NA	-1209	-25	intron_retention	FALSE	canonical	0	0	junction_2	2343963.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-41	False	CATAAA	-32
PB.833.7	chr1	-	1758	6	full-splice_match	HDGF	ENST00000357325.9	2380	6	178	444	-22	-25	multi-exon	FALSE	canonical	1	1371409	junction_1	1337814.0678038036	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	138	860	75.0	899	False	CATAAA	-32
PB.5477.2	chr18	-	1599	10	full-splice_match	ACAA2	ENST00000285093.14	3350	10	386	1365	363	-27	multi-exon	FALSE	canonical	1	104460	junction_2	336307.51667047484	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	91	1284	45.0	-5	True	NA	NA
PB.5477.3	chr18	-	1742	10	novel_in_catalog	ACAA2	novel	3350	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	23853	junction_9	361930.59195481864	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	372	1400	25.0	-17	True	AATAAA	-16
PB.5477.1	chr18	-	2959	10	full-splice_match	ACAA2	ENST00000285093.14	3350	10	390	1	367	-1	multi-exon	FALSE	canonical	1	104460	junction_2	336307.51667047484	NA	5	NA	TRUE	NA	NA	NA	C	coding	397	1194	87	1280	30.0	-1	True	NA	NA
PB.2538.1	chr12	-	1821	7	novel_not_in_catalog	YARS2	novel	489	3	NA	NA	5	2235	any annotated donor/acceptor	FALSE	canonical	1	2290	junction_1	198124.36597977768	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	24	1457	40.0	-1	True	AATAAA	-7
PB.2538.3	chr12	-	1636	5	full-splice_match	YARS2	ENST00000324868.12	2122	5	2	484	2	176	multi-exon	FALSE	canonical	1	362195	junction_4	45846.64323862762	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	27	1460	25.0	-4	True	AATAAA	-11
PB.2538.2	chr12	-	2185	5	full-splice_match	YARS2	ENST00000324868.12	2122	5	-65	2	-65	-2	multi-exon	FALSE	canonical	1	362195	junction_4	45846.64323862762	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	94	1527	95.0	-71	False	NA	NA
PB.10930.4	chr7	+	1618	10	full-splice_match	ABCB8	ENST00000477092.5	1596	10	-13	-9	4	-7	multi-exon	FALSE	canonical	1	53896	junction_9	75907.75529549006	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	63	1358	45.0	4	True	AGTAAA	-9
PB.10930.1	chr7	+	2462	16	full-splice_match	ABCB8	ENST00000358849.8	4683	16	4	2217	1	2	multi-exon	FALSE	canonical	1	144668	junction_9	45832.35877654806	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	90	2246	25.0	-48	False	NA	NA
PB.10930.3	chr7	+	2490	17	full-splice_match	ABCB8	ENST00000297504.10	2487	17	2	-5	2	4	multi-exon	FALSE	canonical	1	4114	junction_2	91449.50379237218	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	65	2272	20.0	2	True	NA	NA
PB.10930.2	chr7	+	4659	16	full-splice_match	ABCB8	ENST00000358849.8	4683	16	22	2	-5	-2	multi-exon	FALSE	canonical	1	144668	junction_9	45832.35877654806	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	72	2228	20.0	-5	True	NA	NA
PB.3825.1	chr15	+	2534	3	full-splice_match	SERF2	ENST00000249786.8	1537	3	486	-1483	-2	-11	multi-exon	FALSE	canonical	1	13408683	junction_1	1679566.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	NA	NA
PB.4409.8	chr16	-	1783	9	full-splice_match	DNAJA2	ENST00000317089.9	3122	9	81	1258	-43	2	multi-exon	FALSE	canonical	1	663430	junction_8	212317.76938809786	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	136	1374	60.0	-37	True	NA	NA
PB.3825.2	chr15	+	3171	2	full-splice_match	SERF2	ENST00000486144.1	1030	2	-26	-2115	-26	-24	multi-exon	FALSE	canonical	1	13408683	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8310	False	NA	NA
PB.5111.4	chr17	+	2877	7	novel_in_catalog	RSAD1	novel	2528	9	NA	NA	-5	0	intron_retention	FALSE	canonical	1	143948	junction_1	75967.6679722294	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	31	945	5.0	-5	True	AATAAA	-17
PB.10465.6	chr7	-	5230	8	full-splice_match	SCRN1	ENST00000426154.5	5275	8	20	25	20	-25	multi-exon	FALSE	canonical	1	6058	junction_7	226974.88353551188	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	158	1402	70.0	545	False	NA	NA
PB.1946.2	chr11	-	2603	15	novel_in_catalog	SLC43A1	novel	2598	15	NA	NA	31	-1	combination_of_known_junctions	TRUE	canonical	1	18735	junction_13	76567.30066208793	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	587	2044	10.0	-48	True	AATAAA	-13
PB.1946.1	chr11	-	2563	15	full-splice_match	SLC43A1	ENST00000278426.7	2598	15	34	1	28	-1	multi-exon	FALSE	canonical	1	52622	junction_14	60846.03281334329	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	323	2002	5.0	-51	True	AATAAA	-15
PB.10465.5	chr7	-	5271	8	full-splice_match	SCRN1	ENST00000242059.9	5257	8	-41	27	-41	-26	multi-exon	FALSE	canonical	1	209205	junction_7	160764.72803168625	NA	11	1	TRUE	NA	NA	NA	C	coding	414	1245	200	1444	70.0	-79	True	NA	NA
PB.3964.1	chr15	+	2399	16	full-splice_match	BBS4	ENST00000268057.8	2490	16	20	71	0	-70	multi-exon	FALSE	canonical	1	86698	junction_1	54755.95109193358	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	22	1581	20.0	0	True	AATAAA	-16
PB.11902.7	chr9	+	3151	14	novel_not_in_catalog	PMPCA	novel	2174	13	NA	NA	0	4243	any annotated donor/acceptor	FALSE	canonical	1	3976	junction_13	250856.5165979013	NA	3	NA	TRUE	NA	NA	NA	C	coding	525	1578	12	1589	30.0	0	True	AATAAA	-20
PB.3964.3	chr15	+	2280	15	novel_in_catalog	BBS4	novel	2450	15	NA	NA	0	12	no_combination_of_known_junctions	FALSE	canonical	1	2351	junction_14	52415.05262691867	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	22	1368	20.0	0	True	AATAAA	-32
PB.3964.2	chr15	+	2278	16	full-splice_match	BBS4	ENST00000268057.8	2490	16	19	193	-1	-192	multi-exon	FALSE	canonical	1	86698	junction_1	54755.95109193358	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	23	1582	60.0	-1	True	NA	NA
PB.7390.1	chr20	-	3642	1	full-splice_match	PPP1R3D	ENST00000370996.4	3630	1	-8	-4	-8	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	299	900	375	1274	25.0	-7	True	AATAAA	-18
PB.10465.8	chr7	-	4392	3	novel_not_in_catalog	SCRN1	novel	5257	8	NA	NA	36827	-26	any annotated donor/acceptor	FALSE	canonical	1	1406	junction_2	312801.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-7	True	NA	NA
PB.4937.5	chr17	+	1840	1	incomplete-splice_match	MLLT6	ENST00000621332.4	7578	20	22397	25	2182	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-2531	False	AATAAA	-13
PB.8352.4	chr3	+	1436	7	full-splice_match	SEC22A	ENST00000492595.5	972	7	-12	-452	-12	265	multi-exon	FALSE	canonical	1	86962	junction_1	37167.96157833906	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	61	984	30.0	-12	True	AATAAA	-16
PB.4937.1	chr17	+	2178	4	incomplete-splice_match	MLLT6	ENST00000619356.1	3868	8	3546	5	-2127	-5	5prime_fragment	FALSE	canonical	1	49617	junction_3	183128.23628327288	NA	1	NA	TRUE	NA	NA	NA	B	coding	124	375	215	589	45.0	-8341	False	AATAAA	-33
PB.11902.8	chr9	+	2922	13	novel_not_in_catalog	PMPCA	novel	2174	13	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	1167	junction_11	240770.18891308585	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	11	1288	10.0	1	True	AATAAA	-18
PB.1617.2	chr10	+	2359	17	incomplete-splice_match	GBF1	ENST00000369983.3	6403	40	-11	19116	-11	2596	3prime_fragment	FALSE	canonical	1	230200	junction_1	52317.10157057722	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2088	272	2359	70.0	-11	True	NA	NA
PB.1617.3	chr10	+	6352	40	novel_not_in_catalog	GBF1	novel	6403	40	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	15529	junction_15	113829.33257266424	NA	0	NA	TRUE	NA	NA	NA	C	coding	1843	5532	262	5793	10.0	-1	True	AATAAA	-16
PB.1617.1	chr10	+	6433	40	full-splice_match	GBF1	ENST00000369983.3	6403	40	-31	1	-31	-1	multi-exon	FALSE	canonical	1	153234	junction_33	102950.71549563149	NA	0	NA	TRUE	NA	NA	NA	C	coding	1859	5580	292	5871	5.0	-31	False	AATAAA	-19
PB.1617.4	chr10	+	6387	40	novel_not_in_catalog	GBF1	novel	6403	40	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	230200	junction_1	95997.56905944449	NA	0	NA	TRUE	NA	NA	NA	C	coding	1855	5568	261	5828	10.0	0	True	AATAAA	-16
PB.1617.5	chr10	+	6420	40	novel_not_in_catalog	GBF1	novel	6403	40	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	309	junction_20	130292.46380814425	NA	8	1	TRUE	NA	NA	NA	C	coding	981	2946	2915	5860	5.0	2	True	AATAAA	-17
PB.2151.6	chr11	+	3408	11	full-splice_match	RELT	ENST00000064780.6	3535	11	119	8	-17	-8	multi-exon	FALSE	canonical	1	62148	junction_1	51963.00417219928	NA	9	NA	TRUE	NA	NA	NA	C	coding	430	1293	143	1435	35.0	-16	True	NA	NA
PB.2151.7	chr11	+	2927	11	full-splice_match	RELT	ENST00000064780.6	3535	11	135	473	-1	355	multi-exon	FALSE	canonical	1	62148	junction_1	51963.00417219928	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	127	1419	15.0	0	True	NA	NA
PB.2151.4	chr11	+	2687	10	novel_in_catalog	RELT	novel	3535	11	NA	NA	-19	355	intron_retention	FALSE	canonical	1	2693	junction_5	72505.96324969025	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	145	1179	15.0	-18	True	NA	NA
PB.2151.5	chr11	+	3956	10	novel_in_catalog	RELT	novel	3535	11	NA	NA	-17	0	intron_retention	FALSE	canonical	1	62148	junction_1	54014.14091755721	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	143	871	15.0	-16	True	AATAAA	-19
PB.2151.2	chr11	+	4327	10	novel_in_catalog	RELT	novel	3535	11	NA	NA	-32	356	intron_retention	FALSE	canonical	1	62148	junction_1	54014.14091755721	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	158	886	15.0	-31	True	NA	NA
PB.2151.3	chr11	+	2593	11	full-splice_match	RELT	ENST00000064780.6	3535	11	116	826	-20	2	multi-exon	FALSE	canonical	1	62148	junction_1	51963.00417219928	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	146	1438	10.0	-19	True	AATAAA	-21
PB.8794.5	chr4	+	2119	19	full-splice_match	SRP72	ENST00000642900.1	3855	19	1	1735	0	118	multi-exon	FALSE	canonical	1	236782	junction_7	232883.1053351779	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	19	2034	20.0	-16	True	AATAAA	-23
PB.2151.1	chr11	+	2848	11	novel_not_in_catalog	RELT	novel	3535	11	NA	NA	61	357	intron_retention	FALSE	non_canonical	0	0	junction_3	70591.60999871019	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	292	1338	15.0	-9977	False	NA	NA
PB.5669.1	chr19	+	3278	3	full-splice_match	LRRC8E	ENST00000306708.10	3595	3	15	302	15	-302	multi-exon	FALSE	canonical	1	19956	junction_1	9127.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	796	2391	87	2477	75.0	10	True	NA	NA
PB.10496.1	chr7	+	2089	1	novel_in_catalog	YAE1	novel	899	3	NA	NA	-1	-2087	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.606.1	chr1	-	6199	3	intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	48563	junction_1	1213.5	NA	2	NA	FALSE	NA	NA	NA	A	coding	575	1728	221	1948	95.0	-41	False	NA	NA
PB.7274.1	chr20	-	3026	16	full-splice_match	NDRG3	ENST00000349004.5	2964	16	-63	1	-63	-1	multi-exon	TRUE	canonical	1	163383	junction_15	116824.60475818726	NA	2	NA	TRUE	NA	NA	NA	C	coding	375	1128	146	1273	10.0	-4	True	AATAAA	-26
PB.9271.10	chr5	+	3828	6	incomplete-splice_match	OCLN	ENST00000538151.2	5391	7	9769	1447	9769	-1447	5prime_fragment	FALSE	canonical	1	926	junction_2	55653.4590349962	NA	4	NA	TRUE	NA	NA	NA	C	coding	271	816	27	842	30.0	-8962	False	AATAAA	-13
PB.7274.3	chr20	-	1918	16	full-splice_match	NDRG3	ENST00000349004.5	2964	16	-21	1067	-21	-458	multi-exon	FALSE	canonical	1	163383	junction_15	116824.60475818726	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	104	1231	20.0	-13	True	AATAAA	-12
PB.4755.1	chr17	-	2366	14	full-splice_match	KCNAB3	ENST00000303790.2	2458	14	-407	499	-39	350	multi-exon	FALSE	canonical	1	5652	junction_13	10698.223317628313	NA	0	NA	TRUE	NA	NA	NA	A	coding	404	1215	408	1622	85.0	-24	True	NA	NA
PB.3209.1	chr13	-	3521	6	full-splice_match	RNF219	ENST00000282003.6	3529	6	16	-8	16	8	multi-exon	FALSE	canonical	1	132338	junction_5	19075.51019920568	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	44	2224	20.0	21	False	AATAAA	-26
PB.6943.4	chr2	+	2921	11	novel_not_in_catalog	CASP10	novel	5928	10	NA	NA	0	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	27695.32623819405	NA	2	NA	TRUE	NA	NA	NA	C	coding	522	1569	205	1773	35.0	0	True	AGTAAA	-20
PB.6940.3	chr2	-	4180	18	novel_not_in_catalog	ORC2	novel	4312	18	NA	NA	-10	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	64638.63569292141	NA	2	NA	TRUE	NA	NA	NA	C	coding	514	1545	261	1805	25.0	10	False	AATAAA	-29
PB.6786.1	chr2	-	4668	24	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	-20	1945	any annotated donor/acceptor	TRUE	canonical	0	0	junction_20	319125.43689294567	NA	7	2	TRUE	NA	NA	NA	B	coding	719	2160	564	2723	35.0	7	True	AATAAA	-30
PB.5454.2	chr18	+	4919	24	full-splice_match	FHOD3	ENST00000359247.8	4518	24	-123	-278	-1	2	multi-exon	FALSE	canonical	1	23604	junction_12	29405.194091416488	NA	0	NA	TRUE	NA	NA	NA	C	coding	1422	4269	124	4392	35.0	0	True	AATAAA	-17
PB.7357.1	chr20	-	1136	10	full-splice_match	DPM1	ENST00000371582.8	1161	10	24	1	1	-1	multi-exon	FALSE	canonical	1	75841	junction_3	386936.71045792487	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	9	872	20.0	0	True	AATAAA	-25
PB.7357.2	chr20	-	1051	9	full-splice_match	DPM1	ENST00000371588.9	1075	9	18	6	0	-6	multi-exon	FALSE	canonical	1	734525	junction_3	143623.27569586126	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	10	792	25.0	-1	True	AATAAA	-20
PB.6948.2	chr2	-	4196	26	novel_in_catalog	ALS2	novel	6644	34	NA	NA	5	0	no_combination_of_known_junctions	TRUE	canonical	0	0	junction_23	34487.54213952627	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	308	2899	15.0	15	True	AATAAA	-15
PB.11127.9	chr8	-	3821	3	incomplete-splice_match	PCMTD1	ENST00000522514.5	1287	6	-53	22165	9	2304	3prime_fragment	FALSE	canonical	1	139317	junction_2	104830.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	137	414	256	669	85.0	21	True	NA	NA
PB.8471.3	chr3	-	2141	3	novel_not_in_catalog	SIAH2	novel	2517	2	NA	NA	269	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	268036.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	198	597	538	1134	35.0	39	True	AATAAA	-9
PB.8471.2	chr3	-	2163	3	novel_not_in_catalog	SIAH2	novel	2517	2	NA	NA	209	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	268036.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	278	837	320	1156	35.0	-21	True	AATAAA	-9
PB.79.3	chr1	-	4640	18	full-splice_match	CLSTN1	ENST00000361311.4	4647	18	13	-6	13	4	multi-exon	FALSE	canonical	1	274110	junction_17	501789.1865836319	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	239	3154	10.0	-12	True	AATAAA	-22
PB.6948.3	chr2	-	6404	34	full-splice_match	ALS2	ENST00000264276.10	6644	34	240	0	2	0	multi-exon	FALSE	canonical	1	63003	junction_23	25196.20033002411	NA	0	NA	TRUE	NA	NA	NA	C	coding	1657	4974	134	5107	15.0	-17	True	AATAAA	-15
PB.79.5	chr1	-	4589	17	novel_in_catalog	CLSTN1	novel	5221	19	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	1	274110	junction_16	489929.5925551446	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2859	245	3103	10.0	-18	True	AATAAA	-22
PB.79.4	chr1	-	4451	19	full-splice_match	CLSTN1	ENST00000377298.8	5221	19	774	-4	-83	4	multi-exon	FALSE	canonical	1	129042	junction_17	590939.2017277101	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	20	2965	10.0	207	False	AATAAA	-22
PB.8471.5	chr3	-	1912	3	novel_not_in_catalog	SIAH2	novel	2517	2	NA	NA	205	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	268036.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	198	597	311	907	35.0	-25	True	AATAAA	-7
PB.8471.4	chr3	-	2073	3	novel_in_catalog	SIAH2	novel	2517	2	NA	NA	-34	-8	combination_of_known_junctions	FALSE	canonical	1	2589	junction_2	266742.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	198	597	471	1067	35.0	2706	False	AATAAA	-8
PB.3408.2	chr14	-	2404	5	novel_not_in_catalog	LINC00648	novel	2885	3	NA	NA	-106628	3	any annotated donor/acceptor	TRUE	canonical	1	401	junction_1	1120.9708682655405	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.3408.3	chr14	-	3087	4	novel_not_in_catalog	LINC00648	novel	2885	3	NA	NA	-106564	0	any annotated donor/acceptor	FALSE	canonical	1	1051	junction_1	1002.7795814080425	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	NA	False	NA	NA
PB.3408.1	chr14	-	2700	5	novel_not_in_catalog	LINC00648	novel	2885	3	NA	NA	-106583	3	any annotated donor/acceptor	FALSE	canonical	1	513	junction_1	1077.7688469704437	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.1970.1	chr11	-	3050	5	novel_not_in_catalog	VPS37C	novel	2865	5	NA	NA	-63	-2	any annotated donor/acceptor	FALSE	canonical	1	3837	junction_1	89200.47712701709	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	297	779	5.0	-10	True	AATAAA	-15
PB.1970.2	chr11	-	2818	5	full-splice_match	VPS37C	ENST00000301765.9	2865	5	-39	86	-39	-86	multi-exon	FALSE	canonical	1	116535	junction_4	48273.17117910838	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	273	1340	15.0	14	True	TATAAA	-22
PB.1970.3	chr11	-	2586	4	novel_in_catalog	VPS37C	novel	2865	5	NA	NA	14	-2	no_combination_of_known_junctions	FALSE	canonical	1	10446	junction_3	104080.69395852859	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	77	1024	5.0	-14	True	AATAAA	-15
PB.5481.1	chr18	+	2432	8	novel_not_in_catalog	SKA1	novel	2905	7	NA	NA	0	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	49660.87506811184	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	212	979	35.0	-176	False	NA	NA
PB.3678.4	chr14	-	6581	37	full-splice_match	CDC42BPB	ENST00000361246.6	6758	37	175	2	175	-2	multi-exon	FALSE	canonical	1	235893	junction_36	141812.7556148037	NA	0	NA	TRUE	NA	NA	NA	C	coding	1711	5136	115	5250	10.0	432	False	AATAAA	-24
PB.5481.3	chr18	+	2328	8	novel_not_in_catalog	SKA1	novel	2905	7	NA	NA	-21	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	49660.87506811184	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	188	955	25.0	8	True	NA	NA
PB.5481.2	chr18	+	2517	8	novel_not_in_catalog	SKA1	novel	2905	7	NA	NA	16	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	49660.87506811184	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	196	963	40.0	0	True	NA	NA
PB.5481.5	chr18	+	2527	8	novel_not_in_catalog	SKA1	novel	2905	7	NA	NA	0	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	50420.33807858872	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	206	973	40.0	0	True	NA	NA
PB.5481.4	chr18	+	2851	7	full-splice_match	SKA1	ENST00000285116.7	2905	7	51	3	0	-3	multi-exon	FALSE	canonical	1	60096	junction_1	31063.058563723782	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	161	928	25.0	0	True	NA	NA
PB.3678.3	chr14	-	5172	27	novel_in_catalog	CDC42BPB	novel	6758	37	NA	NA	-7519	-1	intron_retention	FALSE	canonical	1	166393	junction_14	151189.26506401712	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	37	3840	10.0	-7360	False	AATAAA	-25
PB.5481.6	chr18	+	2885	7	full-splice_match	SKA1	ENST00000398452.6	979	7	7	-1913	1	-13	multi-exon	FALSE	canonical	1	53732	junction_1	32992.28960765766	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	205	972	50.0	1	True	NA	NA
PB.6300.10	chr2	-	2283	14	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	9	227	no_combination_of_known_junctions	FALSE	canonical	1	3571	junction_13	111460.86747831164	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	431	1726	30.0	-17	True	AATAAA	-15
PB.6300.11	chr2	-	2213	13	full-splice_match	MBOAT2	ENST00000305997.7	7751	13	106	5432	2	227	multi-exon	FALSE	canonical	1	118112	junction_12	69981.09664814055	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	94	1656	30.0	-24	True	AATAAA	-15
PB.6300.12	chr2	-	2106	12	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	-37	227	no_combination_of_known_junctions	FALSE	canonical	1	7229	junction_11	83749.43806526664	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	278	1549	30.0	-63	True	AATAAA	-15
PB.5454.4	chr18	+	2825	15	incomplete-splice_match	FHOD3	ENST00000359247.8	4518	24	-161	61241	-39	567	3prime_fragment	FALSE	canonical	1	23604	junction_12	22858.753145621242	NA	2	NA	TRUE	NA	NA	NA	C	coding	888	2664	162	2825	55.0	-4	True	NA	NA
PB.6948.8	chr2	-	2652	4	full-splice_match	ALS2	ENST00000467448.5	2677	4	27	-2	-7	2	multi-exon	FALSE	canonical	1	83709	junction_3	24860.7023276138	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	114	1304	30.0	3	True	NA	NA
PB.6595.5	chr2	-	2456	15	full-splice_match	GGCX	ENST00000233838.8	7569	15	-24	5137	-1	-30	multi-exon	FALSE	canonical	1	192063	junction_2	35616.41594826745	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	106	2382	55.0	0	True	NA	NA
PB.6595.2	chr2	-	3080	14	full-splice_match	GGCX	ENST00000430215.7	2314	14	-1	-765	-1	765	multi-exon	FALSE	canonical	1	76936	junction_13	54155.62254942673	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	106	2211	40.0	0	True	ATTAAA	-23
PB.7178.2	chr20	+	3207	11	novel_in_catalog	NDUFAF5	novel	5529	11	NA	NA	-16	-3	intron_retention	FALSE	canonical	1	74619	junction_7	64828.288541423026	NA	0	NA	TRUE	NA	NA	NA	B	coding	98	297	36	332	25.0	-15	True	AATAAA	-15
PB.1687.3	chr10	-	4895	12	full-splice_match	ATE1	ENST00000369043.7	4900	12	6	-1	6	1	multi-exon	FALSE	canonical	1	115472	junction_2	35622.458749437435	NA	6	1	TRUE	NA	NA	NA	C	coding	518	1557	82	1638	10.0	-10	True	AATAAA	-18
PB.6478.20	chr2	+	2895	9	incomplete-splice_match	VRK2	ENST00000340157.8	1888	13	114	25914	-70	-25827	3prime_fragment	FALSE	canonical	1	128372	junction_1	68785.04917131338	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	70	933	25.0	-9	True	CATAAA	-25
PB.7178.1	chr20	+	3110	10	novel_in_catalog	NDUFAF5	novel	5529	11	NA	NA	21	-2	intron_retention	FALSE	canonical	1	37564	junction_3	81601.09992601693	NA	3	NA	TRUE	NA	NA	NA	B	coding	110	333	2430	2762	30.0	-21	True	AATAAA	-16
PB.10802.9	chr7	+	2901	17	novel_in_catalog	ST7	novel	2114	14	NA	NA	-48	-11	combination_of_known_junctions	FALSE	canonical	1	1203	junction_1	114793.4856077834	NA	7	NA	TRUE	NA	NA	NA	C	coding	535	1608	378	1985	60.0	-5456	False	NA	NA
PB.6786.3	chr2	-	3736	24	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	0	979	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	319125.43689294567	NA	4	2	TRUE	NA	NA	NA	B	coding	719	2160	598	2757	25.0	-1	True	ATTAAA	-18
PB.4962.5	chr17	+	3201	8	full-splice_match	WIPF2	ENST00000583130.5	1529	8	-54	-1618	-54	0	multi-exon	FALSE	canonical	1	2294	junction_1	66965.35904419812	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	255	1577	100.0	-2953	False	NA	NA
PB.5675.1	chr19	-	1254	5	full-splice_match	CD320	ENST00000301458.9	1250	5	-4	0	-3	0	multi-exon	FALSE	canonical	1	660134	junction_4	105333.06012922771	NA	0	NA	TRUE	NA	NA	NA	A	coding	282	849	70	918	0.0	-50	True	ATTAAA	-17
PB.7699.6	chr22	-	2868	16	novel_not_in_catalog	SF3A1	novel	5143	16	NA	NA	0	-2185	any annotated donor/acceptor	FALSE	canonical	1	992	junction_10	395199.64871770266	NA	2	NA	TRUE	NA	NA	NA	C	coding	784	2355	93	2447	30.0	6	True	AATAAA	-27
PB.1687.5	chr10	-	4837	11	novel_in_catalog	ATE1	novel	4930	12	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	1708	junction_9	60936.58799079581	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	89	1582	10.0	-17	True	AATAAA	-16
PB.7699.4	chr22	-	3171	16	novel_not_in_catalog	SF3A1	novel	5143	16	NA	NA	-3	-1727	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	409421.2480654233	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	106	2292	20.0	-7	True	GATAAA	-19
PB.7699.5	chr22	-	2781	16	full-splice_match	SF3A1	ENST00000215793.12	5143	16	173	2189	110	-2189	multi-exon	FALSE	canonical	1	381723	junction_4	321483.83559602016	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	331	2364	35.0	116	False	AATAAA	-23
PB.7699.2	chr22	-	3401	16	full-splice_match	SF3A1	ENST00000215793.12	5143	16	23	1719	-5	-1719	multi-exon	FALSE	canonical	1	381723	junction_4	321483.83559602016	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	133	2514	30.0	-34	True	GATAAA	-27
PB.217.5	chr1	+	4963	5	novel_in_catalog	THEMIS2	novel	2337	7	NA	NA	0	1	intron_retention	FALSE	canonical	1	197082	junction_3	107141.02293472842	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	29	1759	40.0	0	True	AATAAA	-21
PB.8166.7	chr3	-	3550	17	novel_not_in_catalog	BAP1	novel	3937	17	NA	NA	-56	1	any annotated donor/acceptor	FALSE	canonical	1	14916	junction_3	184846.3064266902	NA	2	NA	TRUE	NA	NA	NA	C	coding	714	2145	130	2274	25.0	-7	True	AATAAA	-22
PB.1687.4	chr10	-	4811	12	full-splice_match	ATE1	ENST00000540606.5	5165	12	350	4	11	-1	multi-exon	FALSE	canonical	1	31051	junction_11	51758.333848220056	NA	8	1	TRUE	NA	NA	NA	C	coding	511	1536	21	1556	10.0	11	True	AATAAA	-16
PB.12351.6	chrX	+	2251	11	novel_not_in_catalog	GDI1	novel	786	5	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	614	junction_7	770826.6444071325	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	89	1459	20.0	2	True	AATAAA	-14
PB.11393.1	chr8	+	1683	8	full-splice_match	MAF1	ENST00000322428.9	1677	8	-7	1	-7	-1	multi-exon	FALSE	canonical	1	957753	junction_1	385181.0377849642	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	412	1182	15.0	0	True	AATAAA	-15
PB.11393.2	chr8	+	1798	7	full-splice_match	MAF1	ENST00000534585.5	1754	7	-45	1	-32	-1	multi-exon	FALSE	canonical	1	957753	junction_1	326873.27084586193	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	437	1297	15.0	6	True	AATAAA	-15
PB.7807.11	chr22	-	1678	12	full-splice_match	ST13	ENST00000216218.7	3595	12	363	1554	-43	332	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	120	1229	15.0	-21	True	GATAAA	-26
PB.7807.10	chr22	-	2443	12	full-splice_match	ST13	ENST00000216218.7	3595	12	363	789	-43	-789	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	120	1229	20.0	-21	True	ATTAAA	-17
PB.7807.13	chr22	-	3223	11	novel_in_catalog	ST13	novel	3595	12	NA	NA	-25	283	intron_retention	FALSE	canonical	1	1699	junction_7	170588.53501850585	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	102	815	45.0	-3	True	AATAAA	-18
PB.7807.12	chr22	-	1628	12	full-splice_match	ST13	ENST00000216218.7	3595	12	364	1603	-42	283	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	119	1228	45.0	-20	True	AATAAA	-18
PB.7807.15	chr22	-	1504	12	full-splice_match	ST13	ENST00000216218.7	3595	12	364	1727	-42	159	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	119	1228	20.0	-20	True	TTTAAA	-45
PB.7807.14	chr22	-	2762	11	novel_in_catalog	ST13	novel	3595	12	NA	NA	-11	283	intron_retention	FALSE	canonical	1	1699	junction_7	173347.883123504	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	88	900	45.0	5449	False	AATAAA	-18
PB.7807.17	chr22	-	1824	4	novel_not_in_catalog	ST13	novel	3595	12	NA	NA	-10	-11158	any annotated donor/acceptor	FALSE	canonical	1	6134	junction_1	194332.20557648755	NA	4	NA	TRUE	NA	NA	NA	C	coding	113	342	87	428	20.0	5450	False	NA	NA
PB.7807.16	chr22	-	1278	12	full-splice_match	ST13	ENST00000216218.7	3595	12	360	1957	-46	-71	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	123	1232	25.0	-24	True	AATAAA	-28
PB.7043.8	chr2	-	1909	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	19	no_combination_of_known_junctions	FALSE	canonical	1	870	junction_6	755051.8231646117	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	211	1176	65.0	-1	True	AATAAA	-43
PB.11470.5	chr9	+	4211	26	full-splice_match	CNTLN	ENST00000380647.7	5576	26	29	1336	29	-1336	multi-exon	FALSE	canonical	1	25341	junction_15	25816.701859191853	NA	0	NA	TRUE	NA	NA	NA	C	coding	1385	4155	56	4210	80.0	-344	False	NA	NA
PB.12351.5	chrX	+	3055	9	novel_in_catalog	GDI1	novel	786	5	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1547968	junction_1	448791.9419078706	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	95	685	20.0	-4	True	AATAAA	-15
PB.11470.3	chr9	+	2282	3	full-splice_match	CNTLN	ENST00000484374.1	2272	3	10	-20	10	20	multi-exon	FALSE	canonical	1	14370	junction_2	36801.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	75	686	25.0	1	True	AATAAA	-28
PB.2391.1	chr12	-	2276	10	full-splice_match	DCP1B	ENST00000543381.5	2073	10	-107	-96	-42	-2	multi-exon	FALSE	canonical	1	1191	junction_7	74097.83694398763	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	579	2126	30.0	-123	False	AGTAAA	-20
PB.2391.2	chr12	-	2027	9	full-splice_match	DCP1B	ENST00000280665.10	2086	9	56	3	12	-3	multi-exon	FALSE	canonical	1	32459	junction_6	56050.28734078332	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	25	1878	30.0	-1	True	AGTAAA	-19
PB.2391.3	chr12	-	2034	3	full-splice_match	DCP1B	ENST00000535873.2	2231	3	92	105	-16	-105	multi-exon	FALSE	canonical	1	102938	junction_2	24757.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	13	474	80.0	11	True	NA	NA
PB.7043.1	chr2	-	2184	10	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	-1	19	combination_of_known_junctions	FALSE	canonical	1	4313	junction_9	796119.9103269015	NA	1	1	TRUE	NA	NA	NA	C	coding	397	1194	258	1451	65.0	-4	True	AATAAA	-43
PB.12351.2	chrX	+	2466	10	novel_in_catalog	GDI1	novel	786	5	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1547968	junction_1	430455.443735276	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	95	685	20.0	-4	True	AATAAA	-15
PB.6991.9	chr2	-	1276	3	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	65	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66981.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	1	True	NA	NA
PB.7043.5	chr2	-	2175	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	19	any annotated donor/acceptor	FALSE	canonical	1	186	junction_2	731311.398053617	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	211	1362	65.0	-1	True	AATAAA	-43
PB.7043.4	chr2	-	4822	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	19	intron_retention	FALSE	canonical	1	893005	junction_7	410281.8472355066	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	213	1319	65.0	-3	True	AATAAA	-43
PB.7043.7	chr2	-	1939	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	19	no_combination_of_known_junctions	FALSE	canonical	1	1384	junction_5	734327.7939041965	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	211	1206	65.0	-1	True	AATAAA	-43
PB.12351.3	chrX	+	3506	8	novel_in_catalog	GDI1	novel	786	5	NA	NA	-17	0	intron_retention	FALSE	canonical	1	1547968	junction_1	478870.1339053529	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	119	709	20.0	-7032	False	AATAAA	-15
PB.5104.1	chr17	-	3025	1	full-splice_match	AC015909.3	ENST00000572855.1	1794	1	-1234	3	-1234	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	130	393	765	1157	35.0	5683	False	NA	NA
PB.931.1	chr1	+	1953	12	incomplete-splice_match	PRRC2C	ENST00000338920.8	10355	34	-48	60749	-43	-13	3prime_fragment	FALSE	canonical	1	120614	junction_2	224779.65859764253	NA	1	1	TRUE	NA	NA	NA	C	coding	556	1668	286	1953	75.0	-1	True	AAAACA	-14
PB.6991.7	chr2	-	2286	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	76	19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	211	855	20.0	12	True	NA	NA
PB.5495.2	chr18	+	2583	2	novel_not_in_catalog	AC105105.1	novel	2553	2	NA	NA	113	89	any annotated donor/acceptor	FALSE	canonical	1	56	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1673	2014	30.0	-16	True	AATAAA	-28
PB.5495.3	chr18	+	3037	1	genic	AC105105.1	novel	NA	NA	NA	NA	182	81	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	113	342	2135	2476	55.0	11	True	AATAAA	-20
PB.12351.1	chrX	+	2225	11	full-splice_match	GDI1	ENST00000447750.6	2474	11	247	2	1	0	multi-exon	FALSE	canonical	1	1547968	junction_1	430285.15480254486	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	89	1432	20.0	2	True	AATAAA	-15
PB.1109.9	chr1	+	4246	15	full-splice_match	DTL	ENST00000366991.4	4573	15	170	157	-99	-157	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	145	2337	10.0	-46	True	AATAAA	-18
PB.8111.8	chr3	-	2964	21	novel_in_catalog	USP4	novel	3222	21	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	38657	junction_1	123048.48507925645	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	29	2677	90.0	0	True	NA	NA
PB.8111.9	chr3	-	3259	23	novel_not_in_catalog	USP4	novel	3222	21	NA	NA	0	17	any annotated donor/acceptor	FALSE	canonical	1	7630	junction_8	149737.29114200463	NA	2	NA	TRUE	NA	NA	NA	C	coding	1014	3045	48	3092	40.0	0	True	AAAAAG	-17
PB.8767.10	chr4	-	2811	23	full-splice_match	NFXL1	ENST00000507131.5	2664	23	16	-163	16	163	multi-exon	FALSE	canonical	1	36109	junction_22	33394.686229112995	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	54	2789	35.0	9	True	ATTAAA	-22
PB.2637.14	chr12	+	3167	1	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10359	-12262	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-2	True	AATGAA	-21
PB.9809.1	chr6	+	3829	3	full-splice_match	ZNF391	ENST00000244576.8	4079	3	253	-3	-21	3	multi-exon	FALSE	canonical	1	8373	junction_1	10163.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	293	1369	20.0	-21	True	NA	NA
PB.8111.1	chr3	-	3778	22	full-splice_match	USP4	ENST00000265560.8	3126	22	22	-674	4	399	multi-exon	FALSE	canonical	1	199546	junction_16	102244.38068821905	NA	2	NA	TRUE	NA	NA	NA	C	coding	963	2892	26	2917	25.0	3	True	AATACA	-15
PB.8111.2	chr3	-	3604	22	full-splice_match	USP4	ENST00000265560.8	3126	22	15	-493	-3	218	multi-exon	FALSE	canonical	1	199546	junction_16	102244.38068821905	NA	2	NA	TRUE	NA	NA	NA	C	coding	963	2892	33	2924	35.0	-4	True	NA	NA
PB.9809.2	chr6	+	3910	4	full-splice_match	ZNF391	ENST00000461521.1	749	4	-21	-3140	-21	5	multi-exon	FALSE	canonical	1	7280	junction_2	9882.028143160807	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	372	1448	20.0	-21	True	NA	NA
PB.8111.4	chr3	-	3343	21	novel_in_catalog	C3orf62	novel	4235	3	NA	NA	-62126	-6222	no_combination_of_known_junctions	FALSE	canonical	1	15506	junction_11	132115.67944725562	NA	2	NA	TRUE	NA	NA	NA	A	coding	888	2667	12	2678	25.0	17	True	NA	NA
PB.8111.5	chr3	-	3395	22	full-splice_match	USP4	ENST00000265560.8	3126	22	17	-286	-1	11	multi-exon	FALSE	canonical	1	199546	junction_16	102244.38068821905	NA	2	NA	TRUE	NA	NA	NA	C	coding	963	2892	31	2922	25.0	-2	True	AGTAAA	-28
PB.8111.6	chr3	-	3265	21	full-splice_match	USP4	ENST00000351842.8	3222	21	-42	-1	-4	1	multi-exon	FALSE	canonical	1	82756	junction_15	111562.44106064549	NA	1	NA	TRUE	NA	NA	NA	C	coding	916	2751	52	2802	20.0	-4	True	AGTAAA	-18
PB.8111.7	chr3	-	3053	22	full-splice_match	USP4	ENST00000265560.8	3126	22	19	54	1	-2	multi-exon	FALSE	canonical	1	199546	junction_16	102244.38068821905	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	29	2920	90.0	0	True	NA	NA
PB.3301.38	chr14	-	1570	10	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	-2	intron_retention	FALSE	canonical	1	29252	junction_8	921604.724092884	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	401	1282	40.0	16	True	AATAAA	-21
PB.3301.39	chr14	-	1397	9	full-splice_match	HNRNPC	ENST00000554455.5	1784	9	2	385	0	-2	multi-exon	FALSE	canonical	1	233847	junction_6	851664.3440304017	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	189	1109	40.0	18	True	AATAAA	-21
PB.8361.6	chr3	-	2989	14	full-splice_match	SLC12A8	ENST00000469902.5	2989	14	0	0	0	0	multi-exon	FALSE	canonical	1	11579	junction_13	39542.248206280594	NA	2	NA	TRUE	NA	NA	NA	C	coding	714	2145	112	2256	60.0	NA	False	NA	NA
PB.5648.7	chr19	-	3589	20	novel_not_in_catalog	KHSRP	novel	2993	20	NA	NA	-19	-18	intron_retention	FALSE	non_canonical	0	0	junction_19	646317.4971442638	NA	1	NA	TRUE	NA	NA	NA	B	coding	703	2112	113	2224	75.0	-3	True	AATAAA	-5
PB.3301.30	chr14	-	2040	8	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	698581.5025864621	NA	6	1	TRUE	NA	NA	NA	C	coding	301	906	354	1259	50.0	14	True	AATAAA	-30
PB.2637.11	chr12	+	1479	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10359	12087	no_combination_of_known_junctions	FALSE	canonical	1	457962	junction_3	1667057.5241867197	NA	0	NA	TRUE	NA	NA	NA	B	coding	317	954	353	1306	10.0	-2	True	ATTAAA	-17
PB.3301.32	chr14	-	1844	8	full-splice_match	HNRNPC	ENST00000553753.5	1790	8	-28	-26	-6	0	multi-exon	FALSE	canonical	1	233847	junction_5	848376.6727895032	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	197	1063	50.0	10	True	AATAAA	-30
PB.3301.33	chr14	-	1825	10	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	17766	junction_8	703126.4275763264	NA	2	NA	TRUE	NA	NA	NA	C	coding	293	882	277	1158	50.0	18	True	AATAAA	-30
PB.3301.34	chr14	-	1829	7	full-splice_match	HNRNPC	ENST00000336053.10	3301	7	52	1420	0	0	multi-exon	FALSE	canonical	1	120000	junction_6	630326.509197526	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	182	1048	50.0	-1	True	AATAAA	-30
PB.3301.35	chr14	-	1714	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	120000	junction_7	600174.9202894851	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	166	1047	50.0	15	True	AATAAA	-30
PB.3301.36	chr14	-	1754	8	full-splice_match	HNRNPC	ENST00000557201.5	1371	8	-2	-381	-2	0	multi-exon	FALSE	canonical	1	120000	junction_7	658105.5533324888	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	167	1087	50.0	14	True	AATAAA	-30
PB.2637.10	chr12	+	1578	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10359	12090	no_combination_of_known_junctions	FALSE	canonical	1	457962	junction_3	1626219.9008190744	NA	10	2	TRUE	NA	NA	NA	B	coding	349	1050	353	1402	15.0	-2	True	ATTAAA	-20
PB.12247.1	chrX	-	3699	9	full-splice_match	LAMP2	ENST00000434600.6	2089	9	69	-1679	10	1679	multi-exon	FALSE	canonical	1	26807	junction_1	594061.7700043385	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	128	1363	25.0	-1	True	AATAAA	-20
PB.2637.13	chr12	+	3174	12	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10359	12286	intron_retention	FALSE	non_canonical	0	0	junction_7	1004078.10276594	NA	2	NA	TRUE	NA	NA	NA	B	coding	246	741	353	1093	35.0	-2	True	ATTAAA	-32
PB.12247.6	chrX	-	1742	9	full-splice_match	LAMP2	ENST00000200639.8	1867	9	10	115	10	-115	multi-exon	FALSE	canonical	1	953995	junction_1	356261.34590871277	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	128	1360	15.0	-1	True	AATAAA	-45
PB.183.2	chr1	+	899	7	full-splice_match	TMEM50A	ENST00000374358.4	2683	7	390	1394	-10	0	multi-exon	FALSE	canonical	1	1048873	junction_1	291566.3552765	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	164	637	75.0	-27	True	NA	NA
PB.2637.12	chr12	+	3275	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10359	12304	intron_retention	FALSE	canonical	1	457962	junction_3	1612313.3238489623	NA	1	NA	TRUE	NA	NA	NA	B	coding	301	906	353	1258	15.0	-2	True	AATAGA	-18
PB.183.4	chr1	+	2247	7	full-splice_match	TMEM50A	ENST00000374358.4	2683	7	434	2	28	-2	multi-exon	FALSE	canonical	1	1048873	junction_1	291566.3552765	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	120	593	25.0	-2188	False	ATTAAA	-15
PB.183.5	chr1	+	2496	1	novel_in_catalog	TMEM50A	novel	2683	7	NA	NA	11	-10825	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-15
PB.12247.7	chrX	-	1537	9	full-splice_match	LAMP2	ENST00000200639.8	1867	9	10	320	10	102	multi-exon	FALSE	canonical	1	953995	junction_1	356261.34590871277	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	128	1360	45.0	-1	True	AATAAA	-23
PB.4823.1	chr17	+	4659	10	novel_in_catalog	EPN2	novel	562	3	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	54047	junction_5	59362.06216801692	NA	5	NA	TRUE	NA	NA	NA	C	coding	569	1710	490	2199	5.0	NA	False	TATAAA	-24
PB.8767.12	chr4	-	2498	20	incomplete-splice_match	NFXL1	ENST00000507131.5	2664	23	-23	6770	-3	-3991	3prime_fragment	FALSE	canonical	1	36109	junction_19	26871.41282864007	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2406	93	2498	75.0	-30	False	NA	NA
PB.1948.1	chr11	+	1826	3	full-splice_match	CLP1	ENST00000533682.1	2435	3	607	2	2	-2	multi-exon	FALSE	canonical	1	154549	junction_2	25608.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	119	1396	30.0	3	True	AATAAA	-20
PB.8166.3	chr3	-	3593	17	full-splice_match	BAP1	ENST00000296288.9	3434	17	-144	-15	-107	2	multi-exon	TRUE	canonical	1	43830	junction_9	185944.51937304068	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	181	2316	25.0	473	False	AATAAA	-23
PB.1948.2	chr11	+	2512	2	incomplete-splice_match	CLP1	ENST00000302731.4	1634	3	-4	0	-1	0	intron_retention	FALSE	canonical	1	205766	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	125	805	35.0	-3	True	AATAAA	-18
PB.5136.1	chr17	+	2332	3	full-splice_match	DYNLL2	ENST00000579991.2	6805	3	158	4315	158	-4315	multi-exon	FALSE	canonical	1	1190237	junction_1	77914.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	89	270	121	390	10.0	-7192	False	ATTAAA	-13
PB.2637.18	chr12	+	1528	14	full-splice_match	PCBP2	ENST00000359282.9	1730	14	-1	203	-1	-1	multi-exon	FALSE	canonical	1	457962	junction_3	1598952.5562260805	NA	2	1	TRUE	NA	NA	NA	C	coding	331	996	352	1347	20.0	-1	True	ATTAAA	-25
PB.2030.4	chr11	-	3355	14	novel_in_catalog	SF1	novel	2947	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	7603	junction_11	946819.8678909341	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	569	2143	5.0	-11	True	AATAAA	-22
PB.2030.5	chr11	-	3206	12	novel_in_catalog	SF1	novel	2947	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	94775	junction_10	874322.8809015674	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	420	1994	5.0	-12	True	AATAAA	-22
PB.2030.7	chr11	-	3200	13	full-splice_match	SF1	ENST00000227503.13	2850	13	-358	8	-319	-8	multi-exon	FALSE	canonical	1	378907	junction_1	745453.5533175238	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	714	2360	5.0	14	True	AATAAA	-14
PB.10853.1	chr7	+	4349	19	novel_not_in_catalog	EXOC4	novel	1604	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	2098	junction_2	127405.93976987517	NA	3	NA	TRUE	NA	NA	NA	C	coding	873	2622	498	3119	25.0	-10	True	ATTAAA	-19
PB.2030.1	chr11	-	2849	14	full-splice_match	SF1	ENST00000334944.9	3094	14	243	2	-1	-2	multi-exon	FALSE	canonical	1	49159	junction_1	822758.1760867513	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	152	2068	5.0	-13	True	AATAAA	-20
PB.2030.2	chr11	-	3272	13	full-splice_match	SF1	ENST00000377390.7	3470	13	197	1	9	-1	multi-exon	FALSE	canonical	1	771616	junction_1	685664.1244233529	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	142	2061	5.0	-3	True	AATAAA	-21
PB.10853.2	chr7	+	3495	18	full-splice_match	EXOC4	ENST00000253861.4	4185	18	0	690	0	459	multi-exon	TRUE	canonical	1	271851	junction_15	51495.8807982094	NA	2	NA	TRUE	NA	NA	NA	C	coding	974	2925	30	2954	45.0	-10	True	AATAAA	-27
PB.6786.8	chr2	-	4078	26	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	24	976	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	324961.3519718405	NA	4	1	TRUE	NA	NA	NA	B	coding	719	2160	943	3102	20.0	-3	True	ATTAAA	-15
PB.2030.8	chr11	-	2805	14	novel_in_catalog	SF1	novel	2947	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12490	junction_13	959322.0733396941	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	389	1957	5.0	-12	True	AATAAA	-22
PB.3851.4	chr15	-	9157	61	novel_not_in_catalog	FBN1	novel	11756	66	NA	NA	48700	-1	any annotated donor/acceptor	TRUE	canonical	1	250	junction_60	136368.39315525975	NA	1	NA	TRUE	NA	NA	NA	A	coding	2733	8202	41	8242	5.0	337	False	AATAAA	-24
PB.7100.1	chr2	+	2945	2	full-splice_match	DUSP28	ENST00000405954.1	3461	2	493	23	3	-22	multi-exon	FALSE	canonical	1	71704	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	88	267	155	421	75.0	-8137	False	NA	NA
PB.10619.1	chr7	-	8044	31	novel_not_in_catalog	HIP1	novel	8013	31	NA	NA	-27385	0	any annotated donor/acceptor	FALSE	canonical	1	42246	junction_30	35967.53701078546	NA	2	NA	TRUE	NA	NA	NA	C	coding	1003	3012	161	3172	20.0	12	True	AATAAA	-15
PB.10619.3	chr7	-	5736	31	full-splice_match	HIP1	ENST00000616821.4	3120	31	-66	-2550	-66	-1445	multi-exon	FALSE	canonical	1	6690	junction_30	39902.81593883932	NA	5	NA	TRUE	NA	NA	NA	C	coding	1007	3024	74	3097	50.0	16	False	NA	NA
PB.2785.10	chr12	-	2809	10	novel_not_in_catalog	SLC6A15	novel	4879	12	NA	NA	-6	3330	any annotated donor/acceptor	FALSE	canonical	1	3393	junction_1	28097.63617358602	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	474	2138	30.0	-9	True	AATAAA	-21
PB.10619.5	chr7	-	3141	31	full-splice_match	HIP1	ENST00000616821.4	3120	31	-93	72	48	-72	multi-exon	FALSE	canonical	1	6690	junction_30	39902.81593883932	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	101	3124	30.0	-11	True	AATAGA	-17
PB.10619.4	chr7	-	5459	31	full-splice_match	HIP1	ENST00000336926.10	8013	31	-39	2593	-24	-1805	multi-exon	FALSE	canonical	1	29456	junction_30	37305.24881240649	NA	1	NA	TRUE	NA	NA	NA	C	coding	1037	3114	67	3180	60.0	-4	True	NA	NA
PB.10979.1	chr8	-	2564	5	novel_not_in_catalog	PRSS51	novel	1123	5	NA	NA	-13986	1585	intron_retention	FALSE	canonical	1	808	junction_2	1467.6417095122365	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	2	True	AATAAA	-15
PB.3221.1	chr13	-	4322	1	antisense	novelGene_GPR180_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7687.1	chr22	+	2824	4	full-splice_match	NEFH	ENST00000310624.6	3783	4	849	110	849	-110	multi-exon	TRUE	canonical	1	163341	junction_3	36372.17348773953	NA	1	NA	TRUE	NA	NA	NA	A	coding	710	2133	115	2247	40.0	0	True	AATAAA	-14
PB.10597.1	chr7	-	2884	1	full-splice_match	DNAJC30	ENST00000395176.2	2485	1	16	-415	16	415	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	226	681	15	695	90.0	-7	True	NA	NA
PB.8875.9	chr4	+	3634	23	novel_in_catalog	HERC6	novel	3473	20	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	1023	junction_1	32037.693304363576	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	296	2998	25.0	7	True	NA	NA
PB.8875.8	chr4	+	3450	22	novel_in_catalog	HERC6	novel	3473	20	NA	NA	31	0	no_combination_of_known_junctions	FALSE	canonical	1	5701	junction_12	33521.67748895436	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	267	1472	25.0	0	True	NA	NA
PB.4102.1	chr15	-	3533	13	novel_in_catalog	TTC23	novel	3538	13	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	5032	junction_12	29569.794631961664	NA	1	NA	TRUE	NA	NA	NA	B	coding	447	1344	503	1846	5.0	-1	True	AATAAA	-18
PB.8875.3	chr4	+	3607	23	full-splice_match	HERC6	ENST00000264346.11	3779	23	157	15	29	0	multi-exon	FALSE	canonical	1	53609	junction_1	25758.278391503864	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	269	2971	25.0	-2	True	NA	NA
PB.8875.2	chr4	+	3661	22	novel_in_catalog	HERC6	novel	3473	20	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	767	junction_6	34178.499035666646	NA	1	NA	TRUE	NA	NA	NA	C	coding	637	1914	1112	3025	25.0	0	True	NA	NA
PB.8875.1	chr4	+	3878	23	novel_in_catalog	HERC6	novel	3473	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1690	junction_1	31942.259133305775	NA	1	NA	TRUE	NA	NA	NA	C	coding	900	2703	540	3242	25.0	-1	True	NA	NA
PB.11032.2	chr8	-	3837	9	full-splice_match	TNFRSF10B	ENST00000276431.8	4146	9	303	6	145	-6	multi-exon	FALSE	canonical	1	451236	junction_7	103682.81990515292	NA	10	NA	TRUE	NA	NA	NA	C	coding	289	870	436	1305	30.0	5894	False	ATTAAA	-15
PB.8875.7	chr4	+	3338	21	novel_in_catalog	HERC6	novel	3473	20	NA	NA	23	1	no_combination_of_known_junctions	FALSE	canonical	1	1361	junction_8	40082.05905498743	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	1561	2700	20.0	-8	True	NA	NA
PB.4102.2	chr15	-	3778	13	novel_in_catalog	TTC23	novel	3538	13	NA	NA	19	0	combination_of_known_junctions	TRUE	canonical	1	4917	junction_12	29587.84681109233	NA	0	NA	TRUE	NA	NA	NA	B	coding	447	1344	749	2092	10.0	-1	True	AATAAA	-17
PB.8875.5	chr4	+	3749	24	novel_not_in_catalog	HERC6	novel	3473	20	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	1	7674	junction_9	36711.18994059499	NA	4	2	TRUE	NA	NA	NA	C	coding	916	2751	363	3113	25.0	-6	True	NA	NA
PB.8875.4	chr4	+	2829	22	incomplete-splice_match	HERC6	ENST00000264346.11	3779	23	-6	2939	-6	-468	3prime_fragment	FALSE	canonical	1	53609	junction_1	25941.557524961023	NA	8	NA	TRUE	NA	NA	NA	C	coding	921	2763	66	2828	50.0	5	True	NA	NA
PB.12372.1	chrY	+	1497	12	full-splice_match	IL3RA	ENST00000331035.9_PAR_Y	1706	12	176	33	-4	-33	multi-exon	FALSE	canonical	1	31	junction_1	62.30145322847746	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	174	1310	35.0	NA	False	NA	NA
PB.4102.3	chr15	-	3463	11	incomplete-splice_match	TTC23	ENST00000394135.7	2496	12	1640	-1252	17	0	5prime_fragment	FALSE	canonical	1	5368	junction_10	25725.45963223981	NA	1	NA	TRUE	NA	NA	NA	B	coding	447	1344	434	1777	10.0	-3	True	AATAAA	-17
PB.4664.17	chr17	+	5661	12	novel_not_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-94	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	373654.0894747086	NA	9	1	TRUE	NA	NA	NA	C	coding	428	1287	569	1855	35.0	-2	True	ATTAAA	-41
PB.6589.4	chr2	-	5861	5	full-splice_match	TGOLN2	ENST00000398263.6	6138	5	275	2	9	-2	multi-exon	FALSE	canonical	1	156723	junction_3	212518.3310568467	NA	5	NA	TRUE	NA	NA	NA	C	coding	379	1140	15	1154	40.0	12	True	AATAAA	-18
PB.1227.11	chr1	+	3816	5	incomplete-splice_match	MTR	ENST00000366576.3	5234	20	55514	-248	-3211	248	5prime_fragment	FALSE	canonical	1	140192	junction_2	34202.568423292425	NA	4	NA	TRUE	NA	NA	NA	C	coding	250	753	42	794	30.0	NA	False	NA	NA
PB.4102.4	chr15	-	3228	11	novel_in_catalog	TTC23	novel	3538	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	15548	junction_10	23309.587145421516	NA	1	NA	TRUE	NA	NA	NA	B	coding	447	1344	199	1542	10.0	-14	True	AATAAA	-17
PB.7746.1	chr22	-	6506	5	novel_in_catalog	IFT27	novel	1113	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	257085	junction_1	61233.07351832015	NA	0	NA	TRUE	NA	NA	NA	A	coding	155	468	447	914	25.0	-1	True	AATAAA	-17
PB.9540.7	chr5	-	3244	9	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	-10	0	intron_retention	FALSE	canonical	1	5979	junction_8	135457.70795067368	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	160	2493	90.0	2604	False	NA	NA
PB.155.2	chr1	+	2663	19	full-splice_match	KDM1A	ENST00000356634.7	3033	19	372	-2	327	2	multi-exon	FALSE	canonical	1	383003	junction_2	280444.52997357387	NA	10	NA	TRUE	NA	NA	NA	C	coding	756	2271	66	2336	5.0	-7919	False	AATAAA	-19
PB.11932.23	chr9	+	4412	24	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	-45	-3	any annotated donor/acceptor	FALSE	canonical	1	714	junction_1	95905.59242044266	NA	1	NA	TRUE	NA	NA	NA	C	coding	1006	3021	248	3268	80.0	-4453	False	NA	NA
PB.4102.5	chr15	-	3394	12	novel_in_catalog	TTC23	novel	3538	13	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	8635	junction_11	25125.347720302612	NA	1	NA	TRUE	NA	NA	NA	B	coding	447	1344	367	1710	10.0	13	True	AATAAA	-15
PB.3829.11	chr15	+	3702	11	novel_in_catalog	CASC4	novel	742	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	1211	junction_1	165296.52144748843	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	396	1349	15.0	9	True	AATAAA	-19
PB.3829.10	chr15	+	3709	8	novel_in_catalog	CASC4	novel	742	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	6298	junction_5	183363.98569278227	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	297	1358	10.0	5	True	AATAAA	-17
PB.6589.6	chr2	-	5167	4	full-splice_match	TGOLN2	ENST00000377386.7	6489	4	149	1173	20	-1170	multi-exon	FALSE	canonical	1	560082	junction_3	78492.03061599453	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	315	1628	95.0	2	True	NA	NA
PB.11167.10	chr8	-	2481	1	genic	VCPIP1	novel	NA	NA	NA	NA	-18	-36268	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	734	2202	278	2479	65.0	-25	True	AAAACA	-9
PB.6613.11	chr2	-	2799	13	incomplete-splice_match	EIF2AK3	ENST00000303236.7	4646	17	120	18123	120	517	3prime_fragment	FALSE	canonical	1	113466	junction_12	28012.749065157815	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2616	183	2798	40.0	-1	True	ACTAAA	-11
PB.5184.1	chr17	-	3712	17	novel_in_catalog	PECAM1	novel	6831	16	NA	NA	-22	-3089	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	41855.57308392269	NA	0	NA	TRUE	NA	NA	NA	A	coding	728	2187	214	2400	25.0	NA	False	AATAAA	-20
PB.11571.3	chr9	-	3229	4	novel_not_in_catalog	AL590399.5	novel	3325	3	NA	NA	-58194	2563	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	65.46754921333164	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.11571.2	chr9	-	3238	4	novel_not_in_catalog	AL590399.5	novel	3325	3	NA	NA	-58227	2563	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	8.259674462242577	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.11571.1	chr9	-	3427	5	novel_not_in_catalog	AL590399.5	novel	3325	3	NA	NA	-58270	2563	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	63.65286717815624	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.7176.1	chr20	-	2291	14	full-splice_match	TASP1	ENST00000337743.8	2352	14	9	52	9	-52	multi-exon	FALSE	canonical	1	47560	junction_13	21180.24665584343	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	119	1375	20.0	-4	True	AATAAA	-19
PB.7176.2	chr20	-	1902	14	full-splice_match	TASP1	ENST00000337743.8	2352	14	-11	461	-11	-461	multi-exon	FALSE	canonical	1	47560	junction_13	21180.24665584343	NA	3	NA	TRUE	NA	NA	NA	C	coding	418	1257	139	1395	30.0	-24	False	AATAAA	-16
PB.7176.3	chr20	-	3154	12	novel_in_catalog	TASP1	novel	2302	14	NA	NA	12	19578	no_combination_of_known_junctions	FALSE	canonical	1	4226	junction_5	35630.32553948374	NA	96	2	TRUE	NA	NA	NA	C	coding	189	570	116	685	90.0	-1	True	NA	NA
PB.1227.10	chr1	+	5195	1	novel_in_catalog	MTR	novel	10405	32	NA	NA	-19546	-20420	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.11807.4	chr9	+	2109	14	full-splice_match	FPGS	ENST00000630236.2	2160	14	25	26	8	-3	multi-exon	FALSE	canonical	1	27394	junction_9	229741.64980845348	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	169	1170	45.0	1	True	ATTAAA	-14
PB.4501.1	chr16	-	3840	24	full-splice_match	SLC12A4	ENST00000316341.7	4765	24	75	850	-3	90	multi-exon	TRUE	canonical	1	171624	junction_21	68611.58405861314	NA	0	NA	TRUE	NA	NA	NA	A	coding	1085	3258	67	3324	0.0	-7	True	AATAAA	-23
PB.9596.3	chr5	-	3540	11	full-splice_match	RNF145	ENST00000519865.5	3478	11	-64	2	-5	0	multi-exon	TRUE	canonical	1	7596	junction_10	178072.01079700876	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	290	2281	15.0	1415	False	AATAAA	-16
PB.9596.4	chr5	-	3511	10	novel_in_catalog	RNF145	novel	3364	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	4122	junction_7	181646.65408981443	NA	3	NA	TRUE	NA	NA	NA	C	coding	488	1467	786	2252	15.0	9	True	AATAAA	-16
PB.9596.5	chr5	-	3214	12	novel_in_catalog	RNF145	novel	3364	11	NA	NA	-16	0	intron_retention	FALSE	canonical	1	22528	junction_1	168376.94762581107	NA	2	NA	TRUE	NA	NA	NA	C	coding	636	1911	377	2287	15.0	-15	True	AATAAA	-16
PB.9596.6	chr5	-	3382	10	novel_in_catalog	RNF145	novel	3364	11	NA	NA	5	-1	intron_retention	FALSE	canonical	1	2695	junction_9	160553.27445599862	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	469	2124	15.0	6	True	AATAAA	-15
PB.6165.3	chr19	-	1383	4	full-splice_match	C19orf48	ENST00000345523.9	1503	4	120	0	0	0	multi-exon	FALSE	canonical	1	283927	junction_3	487067.04445897386	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	640	993	25.0	-2	True	CATAAA	-18
PB.6165.2	chr19	-	1404	4	novel_in_catalog	C19orf48	novel	1844	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	47819	junction_1	621526.7073501794	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	661	1014	25.0	-1	True	CATAAA	-18
PB.6165.1	chr19	-	1565	5	novel_not_in_catalog	C19orf48	novel	1844	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	59	junction_4	621936.5759855964	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	822	1175	25.0	4	True	CATAAA	-18
PB.7697.3	chr22	-	2678	7	novel_in_catalog	AC004997.1	novel	1974	14	NA	NA	-27467	-6744	intron_retention	FALSE	canonical	1	6079	junction_6	86211.50290306716	NA	0	NA	TRUE	NA	NA	NA	B	coding	227	684	395	1078	20.0	-12	False	AATAAA	-16
PB.7697.4	chr22	-	2434	9	novel_in_catalog	AC004997.1	novel	1974	14	NA	NA	-27455	-6745	intron_retention	FALSE	canonical	1	9563	junction_1	74964.09501961172	NA	0	NA	TRUE	NA	NA	NA	B	coding	363	1092	57	1148	20.0	0	True	AATAAA	-15
PB.6165.4	chr19	-	1717	3	novel_in_catalog	C19orf48	novel	1844	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	283927	junction_2	592225.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	974	1327	25.0	-1	True	CATAAA	-18
PB.11565.1	chr9	+	2936	1	intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-33	False	NA	NA
PB.915.4	chr1	+	1126	7	full-splice_match	TIPRL	ENST00000367833.6	3032	7	-2	1908	-2	-1908	multi-exon	FALSE	canonical	1	537375	junction_1	183468.80467050037	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	151	966	15.0	-5859	False	AATAAA	-25
PB.10228.42	chr6	-	2676	4	novel_in_catalog	BCLAF1	novel	7719	15	NA	NA	1	-528	intron_retention	FALSE	canonical	1	270682	junction_1	162469.86481669624	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1242	1433	2674	60.0	-3	True	NA	NA
PB.10228.40	chr6	-	1605	5	incomplete-splice_match	BCLAF1	ENST00000529826.5	2423	9	4	6686	1	-607	3prime_fragment	FALSE	canonical	1	252740	junction_2	153979.89184853813	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1164	441	1604	65.0	3	True	AATAGA	-20
PB.10228.41	chr6	-	3053	4	incomplete-splice_match	BCLAF1	ENST00000530767.5	4186	13	-59	16719	1	-515	3prime_fragment	FALSE	canonical	1	252740	junction_1	167275.8978102411	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	243	1262	65.0	3	True	NA	NA
PB.7503.1	chr21	-	1620	13	full-splice_match	CRYZL1	ENST00000381554.7	1617	13	-6	3	-6	-3	multi-exon	FALSE	canonical	1	164553	junction_2	54777.429782306834	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	93	1142	30.0	2161	False	NA	NA
PB.7413.1	chr20	-	2634	2	intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4024	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	155	468	3	470	25.0	1429	False	AATAAA	-18
PB.7503.2	chr21	-	1692	14	novel_not_in_catalog	AP000311.1	novel	1078	8	NA	NA	289853	-4657	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	132261.14589472077	NA	0	NA	TRUE	NA	NA	NA	B	coding	322	969	161	1129	30.0	-14	True	NA	NA
PB.7503.3	chr21	-	1475	13	full-splice_match	CRYZL1	ENST00000381554.7	1617	13	19	123	0	-3	multi-exon	FALSE	canonical	1	164553	junction_2	54777.429782306834	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	68	1117	40.0	-1	True	GATAAA	-29
PB.7570.2	chr21	+	4213	33	novel_not_in_catalog	COL6A1	novel	4238	35	NA	NA	13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	881899.7459244034	NA	5	2	TRUE	NA	NA	NA	B	coding	724	2175	102	2276	10.0	-20	True	AATAAA	-16
PB.7570.1	chr21	+	3275	33	novel_not_in_catalog	COL6A1	novel	4238	35	NA	NA	6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	881899.7459244034	NA	5	2	TRUE	NA	NA	NA	B	coding	724	2175	109	2283	25.0	-27	True	AGTAAA	-24
PB.7570.4	chr21	+	3219	24	novel_not_in_catalog	COL6A1	novel	4238	35	NA	NA	2641	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	870480.424729305	NA	2	1	TRUE	NA	NA	NA	B	coding	359	1080	1105	2184	5.0	-9158	False	AATAAA	-15
PB.8468.6	chr3	-	2480	3	full-splice_match	SERP1	ENST00000239944.6	3171	3	174	517	32	-513	multi-exon	FALSE	canonical	1	2781995	junction_1	415581.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	6	True	AATAAA	-17
PB.11919.5	chr9	-	1687	12	incomplete-splice_match	DPP7	ENST00000371579.6	1590	13	-26	-1	-18	1	intron_retention	FALSE	canonical	1	761972	junction_11	385931.6348045455	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	597	1580	5.0	-16	True	AATAAA	-22
PB.6650.1	chr2	-	4054	3	novel_in_catalog	MITD1	novel	482	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	387117	junction_2	131033.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	3	461	30.0	-27	True	NA	NA
PB.6650.2	chr2	-	3322	4	full-splice_match	MITD1	ENST00000464685.1	3270	4	-54	2	18	1	multi-exon	FALSE	canonical	1	387117	junction_3	108540.9880255176	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	36	419	30.0	15	True	NA	NA
PB.6650.3	chr2	-	3276	5	novel_in_catalog	MITD1	novel	482	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	387117	junction_4	109441.75529705286	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	70	453	30.0	-19	True	NA	NA
PB.5005.9	chr17	-	2793	11	novel_in_catalog	BECN1	novel	2112	12	NA	NA	1	-4	intron_retention	FALSE	canonical	1	211102	junction_10	204647.32981500152	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	1086	2174	30.0	-1	True	AATAAA	-18
PB.5005.8	chr17	-	1925	10	novel_in_catalog	BECN1	novel	2112	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	46314	junction_1	286296.06716452906	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	151	1299	10.0	0	True	AATAAA	-25
PB.5005.1	chr17	-	1973	11	novel_in_catalog	BECN1	novel	2112	12	NA	NA	1	8	combination_of_known_junctions	TRUE	canonical	1	53506	junction_1	248526.5355479169	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	130	1197	5.0	-1	True	AATAAA	-33
PB.5005.3	chr17	-	2251	13	novel_in_catalog	BECN1	novel	2112	12	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	1	5803	junction_3	321428.47637300624	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	145	1311	10.0	6	True	AATAAA	-27
PB.5005.2	chr17	-	2786	11	full-splice_match	BECN1	ENST00000543382.6	2504	11	0	-282	0	2	multi-exon	FALSE	canonical	1	370275	junction_10	168915.970060856	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	1070	2158	10.0	-7	True	AATAAA	-27
PB.5005.5	chr17	-	1903	10	novel_in_catalog	BECN1	novel	2112	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	46314	junction_1	263736.2734239558	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	127	1275	10.0	2	True	AATAAA	-27
PB.5005.4	chr17	-	2225	13	novel_not_in_catalog	BECN1	novel	2112	12	NA	NA	1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	338962.92005799554	NA	4	NA	TRUE	NA	NA	NA	C	coding	325	978	620	1597	10.0	-1	True	AATAAA	-27
PB.12091.22	chrX	-	2617	16	novel_not_in_catalog	SMC1A	novel	9784	25	NA	NA	-196	12370	any annotated donor/acceptor	FALSE	canonical	1	3756	junction_15	220607.0666668077	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2403	215	2617	65.0	-10	True	GATAAA	-25
PB.12091.23	chrX	-	2123	12	incomplete-splice_match	SMC1A	ENST00000322213.8	9784	25	64	31095	5	6751	3prime_fragment	FALSE	canonical	1	370159	junction_11	172537.67222525371	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2058	65	2122	25.0	-11	True	NA	NA
PB.798.3	chr1	-	2531	1	novel_in_catalog	FAM189B	novel	1335	5	NA	NA	27	-177	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	264	795	583	1377	75.0	26	True	NA	NA
PB.619.1	chr1	+	3361	21	full-splice_match	MOV10	ENST00000369645.5	3552	21	188	3	-23	2	multi-exon	FALSE	canonical	1	107951	junction_1	107602.42295208784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1003	3012	121	3132	30.0	2	True	AAGAAA	-30
PB.10631.1	chr7	-	4339	2	full-splice_match	FGL2	ENST00000248598.5	4261	2	-85	7	-63	-7	multi-exon	FALSE	canonical	1	347446	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	439	1320	119	1438	45.0	-67	False	ATTAAA	-14
PB.7802.11	chr22	+	1985	1	incomplete-splice_match	TNRC6B	ENST00000301923.13	15958	24	282218	6788	26179	5659	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-8156	False	NA	NA
PB.12198.1	chrX	+	1254	3	full-splice_match	TCEAL1	ENST00000372625.7	1201	3	-59	6	-59	-6	multi-exon	FALSE	canonical	1	79182	junction_2	46389.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	159	480	224	703	45.0	-19	True	AATAAA	-18
PB.11932.26	chr9	+	3834	23	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	92	-31	combination_of_known_junctions	FALSE	canonical	1	16216	junction_1	111020.05197093975	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	135	3077	80.0	-4316	False	AATAAA	-36
PB.7758.1	chr22	+	526	4	full-splice_match	LGALS1	ENST00000215909.9	560	4	28	6	-16	-2	multi-exon	FALSE	canonical	1	20862202	junction_3	3693481.5127194314	NA	0	NA	TRUE	NA	NA	NA	A	coding	135	408	68	475	15.0	-2	True	AATAAA	-24
PB.9800.8	chr6	+	2908	10	novel_not_in_catalog	BTN3A3	novel	671	4	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	53962.53567425331	NA	3	2	TRUE	NA	NA	NA	C	coding	542	1629	277	1905	10.0	1	True	AATAAA	-17
PB.6339.2	chr2	+	2032	1	full-splice_match	RHOB	ENST00000272233.5	2372	1	335	5	335	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	196	591	58	648	20.0	-3633	False	ATTAAA	-22
PB.9800.9	chr6	+	4365	10	novel_in_catalog	BTN3A3	novel	671	4	NA	NA	-1	0	intron_retention	FALSE	canonical	1	43946	junction_2	34116.021961014805	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	2235	3362	10.0	3	True	AATAAA	-17
PB.10827.5	chr7	+	1975	9	full-splice_match	METTL2B	ENST00000262432.12	2182	9	19	188	-1	-96	multi-exon	FALSE	canonical	1	3756	junction_5	70944.62439191129	NA	2	NA	TRUE	NA	NA	NA	C	coding	378	1137	19	1155	60.0	-42	False	NA	NA
PB.6320.5	chr2	+	3951	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	239	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	144367.6415737112	NA	3	NA	TRUE	NA	NA	NA	C	coding	343	1032	984	2015	40.0	-1112	False	AATAAA	-18
PB.4133.1	chr16	+	2734	7	full-splice_match	RAB40C	ENST00000535977.5	2717	7	-24	7	-24	-7	multi-exon	FALSE	canonical	1	2815	junction_1	77894.88142665231	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	247	1092	5.0	-5967	False	AGTAAA	-15
PB.4133.2	chr16	+	2448	5	novel_in_catalog	RAB40C	novel	692	6	NA	NA	4	-4	no_combination_of_known_junctions	FALSE	canonical	1	21784	junction_2	103395.00668069033	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	405	803	5.0	4	True	AGTAAA	-18
PB.4133.3	chr16	+	2561	7	full-splice_match	RAB40C	ENST00000538492.5	2569	7	2	6	2	-6	multi-exon	FALSE	canonical	1	23252	junction_1	71498.60508895728	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	73	918	5.0	11	True	AGTAAA	-16
PB.6256.2	chr19	+	3199	4	novel_not_in_catalog	AC003006.1	novel	421	2	NA	NA	64767	4582	any annotated donor/acceptor	FALSE	canonical	1	8337	junction_3	49661.52968736352	NA	1	NA	TRUE	NA	NA	NA	B	coding	518	1557	248	1804	40.0	-3	True	NA	NA
PB.4224.2	chr16	-	2459	17	novel_in_catalog	ANKS3	novel	2387	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	41646	junction_14	45322.76327488312	NA	1	NA	TRUE	NA	NA	NA	B	coding	656	1971	94	2064	20.0	24	True	AATAAA	-14
PB.4224.1	chr16	-	2291	16	novel_in_catalog	ANKS3	novel	2387	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	26430	junction_14	45039.156779357625	NA	1	NA	TRUE	NA	NA	NA	B	coding	527	1584	312	1895	20.0	-6	True	AATAAA	-15
PB.6256.1	chr19	+	4084	4	novel_in_catalog	AC003006.1	novel	421	2	NA	NA	64767	4572	no_combination_of_known_junctions	FALSE	canonical	1	22371	junction_3	43187.57184139385	NA	0	NA	TRUE	NA	NA	NA	B	coding	518	1557	248	1804	30.0	-3	True	NA	NA
PB.11121.4	chr8	+	4312	19	novel_in_catalog	HGSNAT	novel	5236	18	NA	NA	3	-1032	combination_of_known_junctions	FALSE	canonical	1	13964	junction_14	88587.09743413854	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	40	2058	40.0	-39	True	NA	NA
PB.3322.15	chr14	-	2468	12	full-splice_match	ACIN1	ENST00000338631.10	2445	12	-23	0	-19	0	multi-exon	FALSE	canonical	1	112282	junction_11	431978.68680009805	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	43	1887	20.0	-20	True	AATAAA	-17
PB.10778.9	chr7	-	3902	22	full-splice_match	COG5	ENST00000297135.7	4060	22	168	-10	-85	10	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	358	2940	50.0	-7	True	AATAAA	-19
PB.10778.8	chr7	-	3544	23	novel_not_in_catalog	COG5	novel	4532	21	NA	NA	28	14	any annotated donor/acceptor	FALSE	canonical	1	2911	junction_9	104614.00818570977	NA	10	1	TRUE	NA	NA	NA	C	coding	545	1638	11	1648	45.0	13	True	AATAAA	-23
PB.11121.1	chr8	+	4015	16	novel_in_catalog	HGSNAT	novel	5236	18	NA	NA	-6	-1035	no_combination_of_known_junctions	TRUE	canonical	1	13102	junction_8	81363.03965970462	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	49	1764	35.0	-48	True	NA	NA
PB.11121.2	chr8	+	2928	18	full-splice_match	HGSNAT	ENST00000379644.8	5236	18	-1	2309	-1	-9	multi-exon	FALSE	canonical	1	77951	junction_1	56541.78816099564	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	44	1951	40.0	-43	True	AATAAA	-17
PB.9800.5	chr6	+	3689	11	novel_not_in_catalog	BTN3A3	novel	671	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	9219	junction_10	43278.57998594686	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	223	1356	10.0	-5	True	AATAAA	-17
PB.7722.5	chr22	+	5418	42	full-splice_match	DEPDC5	ENST00000642696.1	6479	42	42	1019	0	0	multi-exon	FALSE	canonical	1	31664	junction_25	17409.51877224133	NA	2	NA	TRUE	NA	NA	NA	C	coding	1572	4719	183	4901	15.0	18	True	AATAAA	-17
PB.7722.4	chr22	+	5475	42	full-splice_match	DEPDC5	ENST00000400249.7	5350	42	-108	-17	-3	12	multi-exon	FALSE	canonical	1	27607	junction_25	17671.01998549549	NA	1	NA	TRUE	NA	NA	NA	C	coding	1581	4746	201	4946	30.0	0	True	AATAAA	-29
PB.7722.7	chr22	+	5187	40	novel_in_catalog	DEPDC5	novel	5197	40	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	21291	junction_22	19522.530873769705	NA	0	NA	TRUE	NA	NA	NA	C	coding	1503	4512	159	4670	15.0	42	True	AATAAA	-17
PB.7722.6	chr22	+	5181	40	novel_in_catalog	DEPDC5	novel	5197	40	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	21291	junction_22	19274.4668967483	NA	3	1	TRUE	NA	NA	NA	C	coding	1494	4485	181	4665	15.0	20	True	AATAAA	-16
PB.7722.1	chr22	+	5355	42	full-splice_match	DEPDC5	ENST00000644331.1	5383	42	54	-26	2	1	multi-exon	TRUE	canonical	1	17198	junction_1	18699.51672287935	NA	1	NA	TRUE	NA	NA	NA	C	coding	1581	4746	92	4837	10.0	-59	True	AATAAA	-18
PB.3322.17	chr14	-	2515	13	full-splice_match	ACIN1	ENST00000357481.6	2563	13	48	0	-4	0	multi-exon	FALSE	canonical	1	79621	junction_12	473925.0055920416	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	183	1934	20.0	-5	True	AATAAA	-17
PB.7722.3	chr22	+	2591	26	full-splice_match	DEPDC5	ENST00000642974.1	2682	26	72	19	-1	-19	multi-exon	FALSE	canonical	1	17198	junction_1	21428.401782680852	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	88	2577	70.0	-55	True	NA	NA
PB.7722.2	chr22	+	5324	42	full-splice_match	DEPDC5	ENST00000400248.7	5319	42	-5	0	1	0	multi-exon	FALSE	canonical	1	17198	junction_1	18454.561272091774	NA	0	NA	TRUE	NA	NA	NA	C	coding	1572	4719	89	4807	15.0	-56	True	AATAAA	-17
PB.8657.1	chr4	-	1738	8	full-splice_match	SLBP	ENST00000489418.5	1977	8	236	3	-1	-3	multi-exon	FALSE	canonical	1	275798	junction_7	324201.61184966116	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	132	944	10.0	-1	True	AATAAA	-13
PB.911.18	chr1	+	2707	18	novel_in_catalog	DCAF6	novel	724	5	NA	NA	17	-331	no_combination_of_known_junctions	FALSE	canonical	1	22253	junction_10	280407.2911216961	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	223	1611	30.0	-6	True	AATAAA	-17
PB.8657.3	chr4	-	3102	7	novel_in_catalog	SLBP	novel	1623	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	275798	junction_6	347192.781862693	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	132	1148	10.0	-1	True	AATAAA	-16
PB.9800.7	chr6	+	2968	11	full-splice_match	BTN3A3	ENST00000244519.6	3002	11	33	1	-3	0	multi-exon	FALSE	canonical	1	43946	junction_2	32729.613670802777	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	217	1965	10.0	1	True	AATAAA	-17
PB.8657.5	chr4	-	1682	8	full-splice_match	SLBP	ENST00000489418.5	1977	8	236	59	-1	-1	multi-exon	FALSE	canonical	1	275798	junction_7	324201.61184966116	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	132	944	10.0	-1	True	NA	NA
PB.8657.4	chr4	-	2996	6	novel_in_catalog	SLBP	novel	1623	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	31880	junction_4	507247.4553439968	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	131	1042	10.0	0	True	AATAAA	-16
PB.6062.1	chr19	-	4939	6	novel_in_catalog	AC245748.2	novel	574	6	NA	NA	-20	-33818	no_combination_of_known_junctions	FALSE	canonical	1	2242	junction_3	14624.111058112216	NA	0	NA	TRUE	NA	NA	NA	A	coding	797	2394	500	2893	15.0	-1	True	ATTAAA	-18
PB.3322.11	chr14	-	7924	18	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	17	0	intron_retention	FALSE	canonical	1	194763	junction_14	421891.49627235596	NA	3	NA	TRUE	NA	NA	NA	C	coding	786	2361	25	2385	20.0	-1	True	AATAAA	-17
PB.911.13	chr1	+	2972	12	full-splice_match	DCAF6	ENST00000470721.5	2803	12	1	-170	1	170	multi-exon	FALSE	canonical	1	22278	junction_10	74496.38907084719	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	239	1657	95.0	-22	True	NA	NA
PB.6320.3	chr2	+	3851	3	full-splice_match	TRIB2	ENST00000155926.8	4391	3	47	493	1	-493	multi-exon	FALSE	canonical	1	290981	junction_2	14270.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	1373	2404	15.0	-6	True	CATAAA	-18
PB.911.15	chr1	+	1982	10	incomplete-splice_match	DCAF6	ENST00000470721.5	2803	12	3	18889	3	11831	3prime_fragment	FALSE	canonical	1	142654	junction_7	40869.51472977032	NA	2	NA	TRUE	NA	NA	NA	C	coding	485	1458	237	1694	20.0	-20	True	ATTAAA	-17
PB.911.14	chr1	+	2849	11	incomplete-splice_match	DCAF6	ENST00000367843.7	3302	20	13	51623	1	170	3prime_fragment	FALSE	canonical	1	102380	junction_10	47015.70700904114	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	239	1717	95.0	-22	True	NA	NA
PB.911.17	chr1	+	2891	20	full-splice_match	DCAF6	ENST00000367843.7	3302	20	22	389	10	-332	multi-exon	FALSE	canonical	1	102380	junction_10	266251.2418328081	NA	1	NA	TRUE	NA	NA	NA	C	coding	880	2643	230	2872	35.0	-13	True	AATAAA	-16
PB.3322.10	chr14	-	6234	11	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-19	0	intron_retention	FALSE	canonical	1	181709	junction_9	475498.972124031	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	5084	5653	20.0	-20	True	AATAAA	-17
PB.9800.2	chr6	+	1885	11	novel_not_in_catalog	BTN3A3	novel	671	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	568	junction_10	45093.436532271524	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	250	1266	10.0	-32	False	AATAAA	-16
PB.9198.2	chr5	+	3622	3	full-splice_match	CARD6	ENST00000254691.9	4221	3	180	419	56	-419	multi-exon	FALSE	canonical	1	31251	junction_2	1430.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1037	3114	20	3133	70.0	-8	True	NA	NA
PB.11549.6	chr9	+	2381	7	full-splice_match	DCAF10	ENST00000377724.7	3862	7	287	1194	235	690	multi-exon	FALSE	canonical	1	129259	junction_1	29655.222495371705	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	79	1758	40.0	-8	True	NA	NA
PB.9800.3	chr6	+	2891	10	novel_in_catalog	BTN3A3	novel	671	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3791	junction_2	42932.52402043738	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	259	1887	5.0	-11	True	AATAAA	-18
PB.6445.24	chr2	-	3843	14	full-splice_match	PREPL	ENST00000409411.5	4725	14	-1	883	-1	620	multi-exon	FALSE	canonical	1	207717	junction_13	146171.0196055721	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	217	2133	30.0	0	True	AATAAA	-22
PB.11278.1	chr8	-	4719	5	novel_in_catalog	ZNF706	novel	782	4	NA	NA	11	3748	combination_of_known_junctions	TRUE	canonical	1	14642	junction_1	90913.56882638586	NA	2	NA	TRUE	NA	NA	NA	C	coding	76	231	174	404	80.0	67	True	NA	NA
PB.8171.21	chr3	-	2501	18	novel_not_in_catalog	PBRM1	novel	7523	28	NA	NA	34	-537	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	88264.52388036197	NA	16	2	TRUE	NA	NA	NA	B	coding	752	2256	245	2500	40.0	17	True	NA	NA
PB.8846.1	chr4	-	4925	17	full-splice_match	ANTXR2	ENST00000403729.6	8273	17	289	3059	-97	1363	multi-exon	FALSE	canonical	1	244193	junction_15	77904.91086371637	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	469	1704	15.0	-8	True	AATAAA	-39
PB.1116.8	chr1	+	3986	6	novel_in_catalog	VASH2	novel	1369	9	NA	NA	0	-3	intron_retention	FALSE	canonical	1	5296	junction_1	27535.81158128447	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	347	988	20.0	0	True	AATAAA	-16
PB.1116.9	chr1	+	3739	8	novel_in_catalog	VASH2	novel	1369	9	NA	NA	0	-6	intron_retention	FALSE	canonical	1	25405	junction_1	15455.429574972635	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	352	1419	85.0	0	True	NA	NA
PB.9349.9	chr5	-	4131	19	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	-468	combination_of_known_junctions	FALSE	canonical	1	34555	junction_5	46969.29583265468	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	164	2203	70.0	-1	True	NA	NA
PB.11131.12	chr8	-	2463	8	novel_in_catalog	TCEA1	novel	2718	9	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	28	junction_7	69208.23339688976	NA	3	NA	TRUE	NA	NA	NA	C	coding	155	468	455	922	40.0	-24	True	AATAAA	-16
PB.11131.11	chr8	-	2502	9	novel_in_catalog	TCEA1	novel	2718	9	NA	NA	-17	-3	no_combination_of_known_junctions	FALSE	canonical	1	421	junction_8	69211.8526174121	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	494	961	40.0	0	True	AATAAA	-16
PB.11131.10	chr8	-	2737	11	novel_not_in_catalog	TCEA1	novel	2718	9	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	215	junction_7	66938.45017148217	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	414	1196	40.0	-24	True	AATAAA	-16
PB.8061.6	chr3	-	3551	4	novel_not_in_catalog	KIAA1143	novel	507	4	NA	NA	0	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	30531.761080335124	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	61	525	40.0	-1	True	NA	NA
PB.6668.5	chr2	-	4181	7	full-splice_match	MFSD9	ENST00000438943.5	2990	7	3	-1194	3	-4	multi-exon	FALSE	canonical	1	17897	junction_4	22377.143291512635	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	1009	1605	15.0	-17	True	ATTAAA	-12
PB.6668.7	chr2	-	2708	6	full-splice_match	MFSD9	ENST00000258436.9	4049	6	-34	1375	0	-177	multi-exon	FALSE	canonical	1	43244	junction_5	10601.61003998921	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	79	1503	80.0	-30	True	NA	NA
PB.6668.6	chr2	-	4026	6	novel_in_catalog	MFSD9	novel	347	2	NA	NA	12	-4	intron_retention	FALSE	canonical	1	21083	junction_2	19686.429524929095	NA	9	NA	TRUE	NA	NA	NA	C	coding	198	597	854	1450	15.0	-8	True	ATTAAA	-12
PB.6668.1	chr2	-	5294	6	full-splice_match	MFSD9	ENST00000258436.9	4049	6	-23	-1222	1	1222	multi-exon	FALSE	canonical	1	43244	junction_5	10601.61003998921	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	68	1492	30.0	-19	True	AATAAA	-28
PB.6668.3	chr2	-	4053	6	full-splice_match	MFSD9	ENST00000258436.9	4049	6	-5	1	-5	-1	multi-exon	FALSE	canonical	1	43244	junction_5	10601.61003998921	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	50	1474	10.0	-1	True	ATTAAA	-15
PB.6668.2	chr2	-	5251	6	novel_in_catalog	MFSD9	novel	347	2	NA	NA	4	1213	intron_retention	FALSE	canonical	1	21083	junction_2	19686.429524929095	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	862	1458	25.0	-16	True	AATAAA	-19
PB.11982.1	chrX	+	4698	4	novel_in_catalog	CA5BP1	novel	843	4	NA	NA	-118	-1694	combination_of_known_junctions	TRUE	canonical	1	14188	junction_1	36407.41906382391	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-276	False	NA	NA
PB.8647.3	chr4	+	2271	11	full-splice_match	TMEM175	ENST00000438836.6	2236	11	-37	2	3	-2	multi-exon	FALSE	canonical	1	97415	junction_3	109454.35791159711	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	845	2113	15.0	-25	True	NA	NA
PB.11982.3	chrX	+	4323	4	novel_in_catalog	CA5BP1	novel	843	4	NA	NA	-17	-2005	combination_of_known_junctions	FALSE	canonical	1	65351	junction_3	38255.99083658518	NA	0	NA	TRUE	NA	NA	NA	B	coding	103	312	3	314	65.0	-6	True	AAAAAG	-27
PB.11982.2	chrX	+	4635	4	novel_in_catalog	CA5BP1	novel	843	4	NA	NA	-18	-1694	combination_of_known_junctions	FALSE	canonical	1	65351	junction_3	38255.99083658518	NA	0	NA	TRUE	NA	NA	NA	B	coding	104	315	1	315	100.0	-7	True	NA	NA
PB.11982.5	chrX	+	3328	4	novel_in_catalog	CA5BP1	novel	843	4	NA	NA	-14	2444	combination_of_known_junctions	FALSE	canonical	1	65351	junction_3	38255.99083658518	NA	0	NA	TRUE	NA	NA	NA	B	coding	102	309	3	311	35.0	-3	True	AATAAA	-14
PB.11982.4	chrX	+	4536	3	novel_in_catalog	CA5BP1	novel	843	4	NA	NA	-15	-1694	no_combination_of_known_junctions	FALSE	canonical	1	13912	junction_2	72291.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	47	144	403	546	100.0	-4	True	NA	NA
PB.8647.4	chr4	+	2206	10	novel_in_catalog	TMEM175	novel	525	5	NA	NA	5	1	intron_retention	FALSE	canonical	1	24729	junction_6	130120.26094177476	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	970	2049	20.0	-9	True	NA	NA
PB.2484.2	chr12	-	2659	2	full-splice_match	HIST4H4	ENST00000358064.3	1918	2	-1	-740	-1	740	multi-exon	FALSE	canonical	1	7006	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	49	360	85.0	-2	True	NA	NA
PB.8428.11	chr3	-	4521	24	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	6	-372	combination_of_known_junctions	FALSE	canonical	1	92879	junction_23	49622.31868144868	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	378	3572	35.0	20	False	AATAAA	-28
PB.8428.10	chr3	-	5001	25	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	7033	junction_23	70995.66305548178	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	440	3634	15.0	25	False	AATAAA	-29
PB.8428.13	chr3	-	4240	24	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	-10	398	combination_of_known_junctions	FALSE	canonical	1	785	junction_20	64344.80351141415	NA	2	1	TRUE	NA	NA	NA	C	coding	919	2760	782	3541	25.0	25	False	TATAAA	-20
PB.8428.12	chr3	-	4309	23	full-splice_match	PIK3CB	ENST00000477593.5	4658	23	-142	491	23	-441	multi-exon	FALSE	canonical	1	13511	junction_22	57659.792271167025	NA	2	NA	TRUE	NA	NA	NA	C	coding	1064	3195	235	3429	65.0	-7	True	NA	NA
PB.2707.9	chr12	+	2850	12	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	998149	junction_10	363466.59385782835	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	1304	2203	20.0	-8	True	AATAAA	-15
PB.2707.8	chr12	+	2752	14	novel_in_catalog	OS9	novel	2135	14	NA	NA	-1	0	intron_retention	FALSE	canonical	1	259608	junction_10	501261.8633905705	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	1033	2106	25.0	-9	True	AATAAA	-14
PB.5735.1	chr19	-	2278	4	full-splice_match	ZNF433	ENST00000550507.5	785	4	-14	-1479	-5	0	multi-exon	FALSE	canonical	1	13215	junction_3	16663.80511434555	NA	1	1	TRUE	NA	NA	NA	A	coding	670	2013	179	2191	75.0	-42	True	NA	NA
PB.8428.16	chr3	-	4220	25	novel_not_in_catalog	PIK3CB	novel	5919	22	NA	NA	2	221	any annotated donor/acceptor	FALSE	canonical	1	941	junction_23	72274.6945247013	NA	2	NA	TRUE	NA	NA	NA	C	coding	1064	3195	504	3698	35.0	16	False	AATATA	-38
PB.2707.5	chr12	+	2513	14	full-splice_match	OS9	ENST00000552285.5	2135	14	179	-557	2	0	multi-exon	FALSE	canonical	1	998149	junction_12	386075.3454356474	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	29	1867	25.0	-11	True	AATAAA	-14
PB.2707.4	chr12	+	3019	13	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	1074334	junction_10	378178.29854869714	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	1309	2373	25.0	-13	True	AATAAA	-14
PB.2707.7	chr12	+	2468	14	full-splice_match	OS9	ENST00000389142.9	2457	14	-13	2	2	0	multi-exon	FALSE	canonical	1	259608	junction_11	513849.89519455546	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	29	1822	25.0	-11	True	AATAAA	-14
PB.2707.6	chr12	+	2635	15	full-splice_match	OS9	ENST00000389146.10	2091	15	-11	-533	2	0	multi-exon	FALSE	canonical	1	259608	junction_11	501313.55115163734	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	29	1987	15.0	-11	True	AATAAA	-16
PB.2707.1	chr12	+	2640	14	novel_not_in_catalog	OS9	novel	2135	14	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	594664.4217357945	NA	2	1	TRUE	NA	NA	NA	C	coding	412	1239	756	1994	25.0	1	True	AATAAA	-14
PB.2707.3	chr12	+	3037	13	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	1074334	junction_10	366715.2917682039	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	1273	2391	25.0	-13	True	AATAAA	-14
PB.2707.2	chr12	+	2874	14	novel_in_catalog	OS9	novel	2135	14	NA	NA	4	0	intron_retention	FALSE	canonical	1	1071907	junction_6	403235.39805736946	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	1461	2228	25.0	-20	True	AATAAA	-14
PB.2616.2	chr12	-	2975	12	novel_in_catalog	GALNT6	novel	5207	11	NA	NA	0	203	combination_of_known_junctions	FALSE	canonical	1	25564	junction_11	44417.07191204379	NA	1	NA	TRUE	NA	NA	NA	B	coding	614	1845	302	2146	55.0	-1	True	NA	NA
PB.2616.3	chr12	-	3070	14	novel_in_catalog	GALNT6	novel	5207	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	16422	junction_13	56843.082653999925	NA	1	NA	TRUE	NA	NA	NA	B	coding	614	1845	616	2460	85.0	-30	True	NA	NA
PB.2616.1	chr12	-	3014	12	novel_in_catalog	GALNT6	novel	5207	11	NA	NA	359	203	combination_of_known_junctions	FALSE	canonical	1	32427	junction_11	43108.939653889014	NA	2	NA	TRUE	NA	NA	NA	B	coding	614	1845	341	2185	55.0	3332	False	NA	NA
PB.3112.8	chr13	-	3092	25	full-splice_match	SUPT20H	ENST00000475892.5	2836	25	-79	-177	-15	0	multi-exon	FALSE	canonical	1	66551	junction_6	124619.48064296458	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	264	2699	25.0	-12	False	AATACA	-21
PB.3112.9	chr13	-	2978	26	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_25	155660.26053736388	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	384	2585	25.0	1	True	AATACA	-21
PB.3112.7	chr13	-	3118	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	59174	junction_4	146645.21767888105	NA	0	NA	TRUE	NA	NA	NA	C	coding	846	2541	222	2762	25.0	1	True	AATACA	-21
PB.3112.4	chr13	-	3741	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	59174	junction_3	136789.63487231042	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	222	1826	25.0	1	True	AATACA	-21
PB.3112.5	chr13	-	3622	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	7419	junction_4	142871.06605848536	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	222	1826	25.0	1	True	AATACA	-21
PB.3112.2	chr13	-	3881	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	92571	junction_7	132744.40158749596	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	222	1826	25.0	1	True	AATACA	-21
PB.3112.3	chr13	-	3833	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	12	0	intron_retention	FALSE	canonical	1	75878	junction_23	144601.03587802633	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	210	1778	25.0	13	True	AATACA	-21
PB.8302.3	chr3	-	4630	7	full-splice_match	NEPRO	ENST00000383675.6	4672	7	39	3	12	-3	multi-exon	FALSE	canonical	1	6814	junction_4	128883.74648841059	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	51	1541	20.0	26	False	NA	NA
PB.3112.1	chr13	-	3787	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-10	0	intron_retention	FALSE	canonical	1	92571	junction_6	122086.17255299179	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	232	1836	25.0	-9	True	AATACA	-21
PB.10278.2	chr6	+	1649	8	full-splice_match	PCMT1	ENST00000649295.1	1733	8	72	12	39	-12	multi-exon	FALSE	canonical	1	649909	junction_7	346235.56068682845	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	136	819	35.0	24	True	AATAAA	-7
PB.10278.3	chr6	+	1196	8	full-splice_match	PCMT1	ENST00000649295.1	1733	8	17	520	-15	-8	multi-exon	FALSE	canonical	1	649909	junction_7	346235.56068682845	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	17	874	35.0	-4	True	ATTAAA	-18
PB.6327.5	chr2	+	5782	14	full-splice_match	GEN1	ENST00000381254.6	6367	14	-44	629	-44	-629	multi-exon	FALSE	canonical	1	18902	junction_1	29853.64133578879	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	259	2985	15.0	-3162	False	AAAAAG	-33
PB.10278.1	chr6	+	1627	8	full-splice_match	PCMT1	ENST00000367384.7	1938	8	299	12	14	-12	multi-exon	FALSE	canonical	1	523377	junction_7	382274.74196387996	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	161	847	35.0	-1	True	AATAAA	-7
PB.6327.3	chr2	+	3139	14	full-splice_match	GEN1	ENST00000317402.11	9854	14	9	6706	9	1465	multi-exon	FALSE	canonical	1	10709	junction_1	31485.82380285418	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	117	2843	15.0	-2	True	AGTAAA	-18
PB.6327.2	chr2	+	5624	14	full-splice_match	GEN1	ENST00000317402.11	9854	14	1	4229	1	-653	multi-exon	FALSE	canonical	1	10709	junction_1	31485.82380285418	NA	5	NA	TRUE	NA	NA	NA	C	coding	908	2727	125	2851	35.0	-10	True	AAAAAG	-9
PB.10278.4	chr6	+	1153	8	full-splice_match	PCMT1	ENST00000649032.1	861	8	-16	-276	-15	-4	multi-exon	FALSE	canonical	1	523377	junction_7	382274.74196387996	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	17	877	35.0	-4	True	ATTAAA	-22
PB.10278.5	chr6	+	1519	7	novel_in_catalog	PCMT1	novel	1938	8	NA	NA	14	-15	combination_of_known_junctions	FALSE	canonical	1	19013	junction_3	602940.8207273192	NA	3	NA	TRUE	NA	NA	NA	C	coding	193	582	161	742	50.0	-1	True	AATAAA	-4
PB.1111.9	chr1	-	1451	8	full-splice_match	TMEM206	ENST00000261455.8	2475	8	-6	1030	0	-485	multi-exon	FALSE	canonical	1	145313	junction_3	32466.44608307639	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	145	1197	30.0	-16	True	AATAAA	-18
PB.6327.8	chr2	+	6375	14	full-splice_match	GEN1	ENST00000381254.6	6367	14	14	-22	1	22	multi-exon	FALSE	canonical	1	18902	junction_1	29853.64133578879	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	201	2927	20.0	11	True	NA	NA
PB.6266.7	chr19	+	3419	8	novel_not_in_catalog	ZNF544	novel	3587	7	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	127917.28185010173	NA	13	1	TRUE	NA	NA	NA	C	coding	756	2271	263	2533	35.0	2	True	NA	NA
PB.6266.6	chr19	+	2558	7	novel_not_in_catalog	ZNF544	novel	3587	7	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	6323	junction_6	121438.15229080833	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	533	1672	35.0	0	True	NA	NA
PB.6266.5	chr19	+	3298	7	novel_in_catalog	ZNF544	novel	3587	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	25269	junction_3	115954.01172974663	NA	2	NA	TRUE	NA	NA	NA	C	coding	573	1722	691	2412	35.0	0	True	NA	NA
PB.5187.48	chr17	-	4238	9	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	5032484	junction_8	510884.96893232665	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	171	995	40.0	-1	True	AATAAA	-44
PB.6266.3	chr19	+	3298	7	novel_in_catalog	ZNF544	novel	3587	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	76846	junction_1	103280.40653967237	NA	2	NA	TRUE	NA	NA	NA	C	coding	715	2148	265	2412	35.0	0	True	NA	NA
PB.6266.2	chr19	+	2596	7	novel_not_in_catalog	ZNF544	novel	3587	7	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	6323	junction_6	120431.85349503678	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	268	1710	35.0	-3	True	NA	NA
PB.6266.1	chr19	+	3278	7	full-splice_match	ZNF544	ENST00000599227.5	3587	7	305	4	-15	-4	multi-exon	TRUE	canonical	1	76846	junction_1	106689.48426261242	NA	2	NA	TRUE	NA	NA	NA	C	coding	573	1722	671	2392	35.0	-188	False	NA	NA
PB.8904.14	chr4	-	2373	8	full-splice_match	UBE2D3	ENST00000321805.11	1087	8	-13	-1273	0	14	multi-exon	FALSE	canonical	1	11862	junction_7	442980.3806030977	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	477	920	25.0	617	False	AATAAA	-31
PB.8904.15	chr4	-	2311	8	novel_not_in_catalog	UBE2D3	novel	3990	8	NA	NA	15	14	any annotated donor/acceptor	FALSE	canonical	1	22249	junction_7	441256.7443507932	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	415	858	25.0	-35	True	AATAAA	-31
PB.5187.41	chr17	-	2293	13	full-splice_match	DDX5	ENST00000578804.5	2021	13	20	-292	20	0	multi-exon	FALSE	canonical	1	17147	junction_12	1982595.1961116574	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	148	1992	40.0	0	True	AATAAA	-45
PB.457.1	chr1	+	4581	4	full-splice_match	LEPROT	ENST00000371065.8	4622	4	40	1	40	-1	multi-exon	FALSE	canonical	1	273706	junction_1	148782.98820093647	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	99	494	35.0	-1874	False	AATAAA	-20
PB.5187.47	chr17	-	4857	5	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	5032484	junction_4	573792.3244948908	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	171	695	40.0	-1	True	AATAAA	-44
PB.10854.11	chr7	-	2376	1	novel_in_catalog	SLC35B4	novel	6797	10	NA	NA	-26	-15245	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.6266.9	chr19	+	3345	8	novel_not_in_catalog	ZNF544	novel	3587	7	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	6136	junction_3	119686.84771127203	NA	2	NA	TRUE	NA	NA	NA	C	coding	573	1722	738	2459	35.0	4	True	NA	NA
PB.5187.44	chr17	-	2091	12	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	65104	junction_1	1907889.8854538207	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	171	1790	40.0	-1	True	AATAAA	-45
PB.3029.9	chr12	-	2694	18	full-splice_match	CHFR	ENST00000450056.6	3250	18	5	551	5	7	multi-exon	FALSE	canonical	1	91636	junction_17	80984.26171614669	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	85	2043	35.0	-14	True	ATTAAA	-21
PB.3029.8	chr12	-	3142	17	novel_in_catalog	CHFR	novel	581	6	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	7404	junction_6	93835.27762035899	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	101	1939	0.0	-30	True	AATAAA	-21
PB.1995.9	chr11	-	3735	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	2	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	668722.8516834335	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	32	2866	30.0	6671	False	AATAAA	-13
PB.1995.8	chr11	-	3743	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	668722.8516834335	NA	1	1	TRUE	NA	NA	NA	C	coding	944	2835	25	2859	30.0	6678	False	AATAAA	-13
PB.852.23	chr1	-	7267	31	novel_in_catalog	COPA	novel	5175	32	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	688780	junction_25	304258.86539041426	NA	5	NA	TRUE	NA	NA	NA	C	coding	1086	3261	3126	6386	15.0	-28	True	AATAAA	-18
PB.1995.3	chr11	-	3835	24	full-splice_match	GANAB	ENST00000356638.7	3608	24	0	-227	0	0	multi-exon	FALSE	canonical	1	1329777	junction_23	479490.5027171953	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	18	2852	30.0	-4	True	AATAAA	-13
PB.1995.2	chr11	-	3985	25	full-splice_match	GANAB	ENST00000648273.1	3846	25	-20	-119	-3	0	multi-exon	FALSE	canonical	1	3609	junction_24	785088.3292556251	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	459	3002	30.0	6675	False	AATAAA	-13
PB.3029.3	chr12	-	3016	16	novel_in_catalog	CHFR	novel	581	6	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	16055	junction_12	93716.11429977711	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	97	1812	0.0	-26	True	AATAAA	-22
PB.3029.2	chr12	-	3076	17	novel_in_catalog	CHFR	novel	581	6	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	30852	junction_12	89123.89432534266	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	97	1872	0.0	-26	True	AATAAA	-22
PB.1995.7	chr11	-	3799	26	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	834193.930074584	NA	1	1	TRUE	NA	NA	NA	C	coding	966	2901	15	2915	30.0	-1	True	AATAAA	-13
PB.3029.4	chr12	-	3386	19	novel_not_in_catalog	CHFR	novel	581	6	NA	NA	-12	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	102129.72547655586	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	102	2183	0.0	-31	False	AATAAA	-21
PB.1995.5	chr11	-	3890	24	novel_in_catalog	GANAB	novel	3718	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	7337	junction_19	670471.1413459966	NA	2	NA	TRUE	NA	NA	NA	C	coding	652	1959	949	2907	30.0	-6	True	AATAAA	-13
PB.1995.4	chr11	-	3905	25	full-splice_match	GANAB	ENST00000346178.8	3906	25	-5	6	-3	0	multi-exon	FALSE	canonical	1	348424	junction_20	723601.7702048137	NA	0	NA	TRUE	NA	NA	NA	C	coding	966	2901	22	2922	30.0	6681	False	AATAAA	-13
PB.9399.1	chr5	-	2414	10	full-splice_match	CCDC112	ENST00000379611.9	2566	10	152	0	14	0	multi-exon	FALSE	canonical	1	53127	junction_9	36852.49583587702	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	137	1726	15.0	-26	True	TATAAA	-21
PB.5729.1	chr19	-	1466	5	full-splice_match	ACP5	ENST00000433365.2	1397	5	9	-78	9	-2	multi-exon	FALSE	canonical	1	221169	junction_1	67057.941878647	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	141	1118	20.0	3004	False	AATAAA	-20
PB.5729.2	chr19	-	2707	2	full-splice_match	ACP5	ENST00000588079.1	584	2	57	-2180	2	-2	multi-exon	FALSE	canonical	1	237441	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	749	1183	20.0	1	True	AATAAA	-20
PB.9399.2	chr5	-	2219	10	full-splice_match	CCDC112	ENST00000379611.9	2566	10	177	170	-31	-3	multi-exon	FALSE	canonical	1	53127	junction_9	36852.49583587702	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	112	1701	25.0	-1	True	AATAAA	-17
PB.4007.5	chr15	+	1447	9	incomplete-splice_match	HMG20A	ENST00000336216.8	4046	10	249	5998	-2	5	3prime_fragment	FALSE	canonical	1	264215	junction_6	40663.19348144431	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	110	1153	5.0	12	True	NA	NA
PB.11055.2	chr8	-	1779	8	novel_in_catalog	PBK	novel	2118	8	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	48157	junction_7	130255.51582774152	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	129	1097	25.0	-1	True	AATAAA	-45
PB.8902.12	chr4	+	2828	4	novel_in_catalog	NFKB1	novel	4085	24	NA	NA	16503	0	intron_retention	FALSE	canonical	1	631849	junction_2	13375.636790656195	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1079	False	AAAAAG	-41
PB.8902.11	chr4	+	2008	11	incomplete-splice_match	NFKB1	ENST00000600343.5	4010	17	18529	1	2994	-1	5prime_fragment	FALSE	canonical	1	543352	junction_2	57877.63186421849	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	114	1505	95.0	-649	False	AAAAAG	-40
PB.11055.4	chr8	-	1554	8	full-splice_match	PBK	ENST00000301905.8	2118	8	287	277	1	-277	multi-exon	FALSE	canonical	1	269885	junction_7	74304.52541468818	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	178	1146	15.0	8	True	AATAAA	-23
PB.8609.20	chr3	-	2383	9	incomplete-splice_match	ACAP2	ENST00000635383.1	1647	18	-190	29682	0	890	3prime_fragment	FALSE	canonical	1	191814	junction_8	65041.1007993215	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	197	961	100.0	-30	True	NA	NA
PB.10340.5	chr6	+	1772	1	full-splice_match	C6orf120	ENST00000332290.3	2667	1	-52	947	-52	-947	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	191	576	323	898	45.0	12	True	NA	NA
PB.3218.57	chr13	-	2744	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-13	2333	0	346	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	2	NA	TRUE	NA	NA	NA	C	coding	519	1560	428	1987	70.0	-1	True	NA	NA
PB.3218.56	chr13	-	2253	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	1331	any annotated donor/acceptor	FALSE	canonical	1	677	junction_1	90620.98741056239	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	428	1828	65.0	-1	True	TTTAAA	-10
PB.1105.2	chr1	-	2470	2	full-splice_match	SLC30A1	ENST00000367001.4	5474	2	-469	3473	-469	-3473	multi-exon	FALSE	canonical	1	235891	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	600	2123	10.0	5	False	AATAAA	-12
PB.11212.2	chr8	-	2064	8	full-splice_match	SNX16	ENST00000345957.8	1853	8	73	-284	-14	49	multi-exon	FALSE	canonical	1	45991	junction_7	24482.330820576768	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	207	1241	75.0	-1	True	AATAAA	-14
PB.3218.50	chr13	-	3550	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	1332	no_combination_of_known_junctions	FALSE	canonical	1	8531	junction_3	91073.43258678069	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	428	1807	65.0	-1	True	TTTAAA	-11
PB.10242.1	chr6	-	4986	19	full-splice_match	REPS1	ENST00000367663.8	2607	19	-501	-1878	-15	511	multi-exon	TRUE	canonical	1	147559	junction_10	116174.37387595054	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	595	2904	35.0	-24	True	ATTAAA	-24
PB.10242.3	chr6	-	3402	20	full-splice_match	REPS1	ENST00000450536.6	4537	20	-26	1161	-22	206	multi-exon	FALSE	canonical	1	194661	junction_19	108384.35222056489	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	602	2992	40.0	-31	True	TATAAA	-8
PB.10242.2	chr6	-	4009	20	full-splice_match	REPS1	ENST00000450536.6	4537	20	4	524	4	0	multi-exon	FALSE	canonical	1	194661	junction_19	108384.35222056489	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	572	2962	20.0	-1	True	AATAAA	-16
PB.10242.5	chr6	-	3285	21	novel_in_catalog	REPS1	novel	4537	20	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	1	637	junction_19	160149.69716158535	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	826	3078	20.0	-1	True	AATAAA	-29
PB.3218.59	chr13	-	4315	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-68	intron_retention	FALSE	canonical	1	221288	junction_2	18760.581722945943	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	3463	4074	40.0	-1	True	AATAAA	-14
PB.3218.58	chr13	-	4420	8	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	18181	junction_2	88161.14805263815	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	428	1717	85.0	-1	True	NA	NA
PB.6258.1	chr19	-	2351	3	full-splice_match	ZNF552	ENST00000391701.1	2352	3	0	1	0	-1	multi-exon	FALSE	canonical	1	56824	junction_2	973.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	171	1394	5.0	-1	True	NA	NA
PB.6258.2	chr19	-	1847	3	full-splice_match	ZNF552	ENST00000391701.1	2352	3	0	505	0	322	multi-exon	FALSE	canonical	1	56824	junction_2	973.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	171	1394	30.0	-1	True	AATAAA	-20
PB.10461.1	chr7	+	3275	7	incomplete-splice_match	CREB5	ENST00000409603.5	1944	10	79367	-1813	59	1450	5prime_fragment	FALSE	canonical	1	24962	junction_1	21559.73254639821	NA	3	NA	TRUE	NA	NA	NA	A	coding	334	1005	100	1104	85.0	8	False	NA	NA
PB.257.1	chr1	+	5381	11	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	-2	-10	intron_retention	TRUE	canonical	1	717714	junction_4	344353.812584397	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	4084	4800	10.0	-20	True	AATAAA	-16
PB.3447.1	chr14	+	1976	6	full-splice_match	CGRRF1	ENST00000216420.11	2057	6	79	2	1	-2	multi-exon	FALSE	canonical	1	60804	junction_3	58679.320561846995	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	54	1052	25.0	-33	True	AATAAA	-40
PB.3447.2	chr14	+	1248	6	full-splice_match	CGRRF1	ENST00000216420.11	2057	6	109	700	25	-5	multi-exon	FALSE	canonical	1	60804	junction_3	58679.320561846995	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	24	1022	45.0	-3	True	CATAAA	-18
PB.3556.2	chr14	+	2629	6	full-splice_match	LIN52	ENST00000555028.5	2776	6	145	2	-15	-2	multi-exon	FALSE	canonical	1	73382	junction_1	23368.699364748565	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	35	373	15.0	-19	False	AATAAA	-14
PB.3556.3	chr14	+	3563	6	novel_not_in_catalog	LIN52	novel	2776	6	NA	NA	0	-5451	any annotated donor/acceptor	FALSE	canonical	1	1672	junction_5	59459.67500953902	NA	2	NA	TRUE	NA	NA	NA	C	coding	114	345	20	364	10.0	-4	True	NA	NA
PB.3556.1	chr14	+	1821	6	full-splice_match	LIN52	ENST00000555028.5	2776	6	134	821	-26	-24	multi-exon	FALSE	canonical	1	73382	junction_1	23368.699364748565	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	46	384	100.0	-30	False	NA	NA
PB.7524.20	chr21	-	2381	8	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	-8	28	intron_retention	FALSE	canonical	1	40997	junction_3	309834.3348873091	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1	387	30.0	12	True	ATTAAA	-24
PB.7524.21	chr21	-	3263	6	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	-5	19	intron_retention	FALSE	canonical	1	203969	junction_3	291081.59892483754	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	2727	3233	20.0	15	True	ATTAAA	-15
PB.7524.22	chr21	-	2948	7	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	0	16	intron_retention	FALSE	canonical	1	33732	junction_3	314850.41545823344	NA	0	NA	TRUE	NA	NA	NA	C	coding	85	258	183	440	25.0	-12	True	ATTAAA	-12
PB.10156.5	chr6	+	1503	14	incomplete-splice_match	CDC40	ENST00000307731.1	3848	15	8	3314	8	-1432	3prime_fragment	FALSE	canonical	1	213879	junction_9	74697.60383307062	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1485	17	1501	65.0	2	True	NA	NA
PB.10156.1	chr6	+	2044	16	full-splice_match	CDC40	ENST00000368932.5	3933	16	-4	1893	-4	-3	multi-exon	FALSE	canonical	1	2518	junction_1	98311.90818469327	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	106	1845	25.0	-2	True	TATAAA	-15
PB.10156.3	chr6	+	3196	16	novel_not_in_catalog	CDC40	novel	3372	15	NA	NA	5	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	98756.82321977668	NA	2	1	TRUE	NA	NA	NA	C	coding	579	1740	20	1759	30.0	-1	True	AATAAA	-25
PB.4351.6	chr16	+	2810	15	full-splice_match	MVP	ENST00000357402.9	2870	15	51	9	7	-9	multi-exon	FALSE	canonical	1	531897	junction_1	197193.50775487887	NA	0	NA	TRUE	NA	NA	NA	A	coding	893	2682	88	2769	15.0	-14	True	AATACA	-27
PB.4351.7	chr16	+	2916	16	novel_not_in_catalog	AC120114.4	novel	556	3	NA	NA	3221	17396	any annotated donor/acceptor	FALSE	canonical	1	2324	junction_2	380319.73788465	NA	0	NA	TRUE	NA	NA	NA	B	coding	893	2682	201	2882	30.0	-13	True	AATACA	-20
PB.4351.4	chr16	+	3222	15	novel_in_catalog	AC120114.4	novel	556	3	NA	NA	3181	17405	no_combination_of_known_junctions	FALSE	canonical	1	97507	junction_5	302480.0534726823	NA	0	NA	TRUE	NA	NA	NA	B	coding	487	1464	1716	3179	20.0	-10	True	AATACA	-29
PB.4351.5	chr16	+	3107	15	novel_not_in_catalog	AC120114.4	novel	556	3	NA	NA	3216	17393	any annotated donor/acceptor	FALSE	canonical	1	152	junction_9	382583.5972340102	NA	0	NA	TRUE	NA	NA	NA	B	coding	277	834	2243	3076	35.0	-18	True	AATACA	-17
PB.4351.2	chr16	+	1194	3	full-splice_match	PAGR1	ENST00000320330.7	1702	3	504	4	504	-4	multi-exon	FALSE	canonical	1	734662	junction_2	76328.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	71	835	30.0	-4867	False	AATAAA	-23
PB.4351.3	chr16	+	3411	3	full-splice_match	PAGR1	ENST00000320330.7	1702	3	524	-2233	524	2233	multi-exon	FALSE	canonical	1	734662	junction_2	76328.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	51	815	30.0	-13	True	AAAAAG	-16
PB.4351.1	chr16	+	3171	3	full-splice_match	PAGR1	ENST00000320330.7	1702	3	904	-2373	904	2373	multi-exon	FALSE	canonical	1	734662	junction_2	76328.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	91	276	160	435	10.0	0	True	NA	NA
PB.7805.2	chr22	-	4456	14	novel_in_catalog	MRTFA	novel	4496	15	NA	NA	-34	-8	combination_of_known_junctions	FALSE	canonical	1	38146	junction_13	86785.2930422999	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	581	3376	75.0	-26	False	NA	NA
PB.9402.2	chr5	-	3808	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	293	232	0	-232	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	14	436	55.0	-1	True	NA	NA
PB.6480.8	chr2	-	3169	1	novel_in_catalog	FANCL	novel	1683	14	NA	NA	4	-24671	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-20	True	NA	NA
PB.11445.8	chr9	+	3894	6	novel_not_in_catalog	MLANA	novel	2415	5	NA	NA	-15	1705	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	112703.35260603386	NA	2	NA	TRUE	NA	NA	NA	C	coding	118	357	70	426	45.0	0	True	NA	NA
PB.6480.5	chr2	-	5530	10	novel_in_catalog	FANCL	novel	1576	13	NA	NA	-1	0	intron_retention	FALSE	canonical	1	153273	junction_3	62141.76706730275	NA	25	NA	TRUE	NA	NA	NA	C	coding	236	711	12	722	15.0	0	True	AATAAA	-14
PB.6480.4	chr2	-	2155	12	novel_in_catalog	FANCL	novel	1576	13	NA	NA	6	1	intron_retention	FALSE	canonical	1	34254	junction_5	83869.93170389808	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	54	863	15.0	-42	True	AATAAA	-15
PB.6480.7	chr2	-	1235	14	full-splice_match	FANCL	ENST00000233741.8	1683	14	7	441	5	67	multi-exon	FALSE	canonical	1	153273	junction_7	54257.30226141354	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	31	1158	75.0	-19	True	NA	NA
PB.6480.6	chr2	-	1635	14	full-splice_match	FANCL	ENST00000233741.8	1683	14	-21	69	1	-69	multi-exon	FALSE	canonical	1	153273	junction_7	54257.30226141354	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	59	1186	30.0	-47	True	AATACA	-18
PB.5394.3	chr18	-	2383	1	novel_in_catalog	PIEZO2	novel	9356	51	NA	NA	-8666	-10495	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.6480.3	chr2	-	3366	11	novel_in_catalog	FANCL	novel	1576	13	NA	NA	7	1	intron_retention	FALSE	canonical	1	153273	junction_4	59066.554314942055	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	53	847	15.0	-41	True	AATAAA	-15
PB.6480.2	chr2	-	1757	15	novel_in_catalog	FANCL	novel	1576	13	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	14174	junction_7	99757.08769533162	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	65	1237	15.0	-53	True	AATAAA	-16
PB.55.7	chr1	-	2352	8	novel_in_catalog	NOL9	novel	6649	12	NA	NA	-12	-3815	no_combination_of_known_junctions	FALSE	canonical	1	2220	junction_6	91853.48809769984	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	11	1660	75.0	0	True	NA	NA
PB.9402.3	chr5	-	3409	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	293	631	0	-631	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	14	436	20.0	-1	True	ATTAAA	-18
PB.55.6	chr1	-	2844	12	full-splice_match	NOL9	ENST00000377705.5	6649	12	-10	3815	-10	-3815	multi-exon	FALSE	canonical	1	81091	junction_11	57773.68582997077	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	44	2152	75.0	225	False	NA	NA
PB.11836.1	chr9	+	5672	44	novel_in_catalog	AL672142.1	novel	378	5	NA	NA	6203	50073	no_combination_of_known_junctions	FALSE	canonical	1	22605	junction_24	142873.35831508026	NA	3	NA	TRUE	NA	NA	NA	B	coding	1738	5217	40	5256	20.0	-290	False	ATTAAA	-15
PB.11080.7	chr8	-	1990	5	full-splice_match	FUT10	ENST00000327671.9	3825	5	279	1556	-9	2	multi-exon	FALSE	canonical	1	58070	junction_4	30736.177315990353	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	354	1793	55.0	-27	True	AATAGA	-42
PB.11836.3	chr9	+	5693	44	full-splice_match	NUP188	ENST00000372577.2	5689	44	-5	1	-5	-1	multi-exon	FALSE	canonical	1	132400	junction_1	125121.39185032458	NA	0	NA	TRUE	NA	NA	NA	A	coding	1749	5250	27	5276	20.0	-5	True	ATTAAA	-16
PB.7805.4	chr22	-	4345	15	novel_not_in_catalog	MRTFA	novel	4496	15	NA	NA	-17	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	107579.84568463839	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	564	3359	75.0	-9	True	NA	NA
PB.11836.5	chr9	+	5294	41	novel_not_in_catalog	AL672142.1	novel	378	5	NA	NA	6221	50072	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	148285.2495096339	NA	2	1	TRUE	NA	NA	NA	B	coding	1279	3840	1040	4879	25.0	0	True	ATTAAA	-14
PB.55.5	chr1	-	3423	13	novel_not_in_catalog	NOL9	novel	6649	12	NA	NA	13	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	73856.00851036653	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	21	2129	40.0	-10	True	ATTAAA	-9
PB.11836.6	chr9	+	5602	44	novel_not_in_catalog	AL672142.1	novel	378	5	NA	NA	6227	50072	any annotated donor/acceptor	FALSE	canonical	1	2473	junction_25	144441.7459700639	NA	0	NA	TRUE	NA	NA	NA	B	coding	1723	5172	16	5187	25.0	6	True	ATTAAA	-14
PB.685.1	chr1	-	2629	2	incomplete-splice_match	ANKRD34A	ENST00000606888.2	3613	4	1971	0	-15	0	5prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	454	1365	438	1802	5.0	14	True	AATAAA	-14
PB.55.4	chr1	-	3807	13	novel_not_in_catalog	NOL9	novel	6649	12	NA	NA	8	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	73856.00851036653	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	26	2134	40.0	-15	True	ATTAAA	-9
PB.11642.2	chr9	+	5023	14	full-splice_match	SYK	ENST00000375754.8	5005	14	-18	0	-18	0	multi-exon	FALSE	canonical	1	147916	junction_1	74633.00885615611	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	167	2074	15.0	-50	True	AATAAA	-14
PB.242.3	chr1	+	1666	9	full-splice_match	ZCCHC17	ENST00000546109.5	1705	9	19	20	3	-3	multi-exon	FALSE	canonical	1	57472	junction_3	216492.72598042988	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	225	926	30.0	-31	True	ACTAAA	-20
PB.10340.1	chr6	+	4018	1	full-splice_match	C6orf120	ENST00000332290.3	2667	1	97	-1448	97	1448	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	191	576	174	749	15.0	-29	False	CATAAA	-16
PB.10057.1	chr6	+	3309	4	novel_in_catalog	AC019205.1	novel	1083	3	NA	NA	-1	2091	combination_of_known_junctions	FALSE	canonical	1	2650	junction_2	6401.320072193443	NA	10	NA	TRUE	NA	NA	NA	C	coding	293	882	1840	2721	50.0	-34	True	AATAAA	-28
PB.2834.1	chr12	-	3187	6	full-splice_match	ARL1	ENST00000261636.12	3241	6	57	-3	-1	3	multi-exon	FALSE	canonical	1	586068	junction_5	227368.03059498052	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	119	664	20.0	8	True	NA	NA
PB.2834.2	chr12	-	3076	5	full-splice_match	ARL1	ENST00000539055.5	1231	5	-46	-1799	28	1	multi-exon	FALSE	canonical	1	12063	junction_4	481120.30387075484	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	148	555	20.0	-21	True	NA	NA
PB.2834.3	chr12	-	3145	6	novel_not_in_catalog	ARL1	novel	3241	6	NA	NA	-10	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	438006.98277721554	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	156	650	55.0	-1	True	NA	NA
PB.2834.4	chr12	-	3074	5	novel_in_catalog	ARL1	novel	3241	6	NA	NA	2	-25	no_combination_of_known_junctions	FALSE	canonical	1	3872	junction_3	470478.9672076213	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	11	True	NA	NA
PB.2834.5	chr12	-	2982	6	full-splice_match	ARL1	ENST00000261636.12	3241	6	53	206	-5	-206	multi-exon	FALSE	canonical	1	586068	junction_5	227368.03059498052	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	123	668	65.0	4	True	NA	NA
PB.2834.6	chr12	-	1709	6	full-splice_match	ARL1	ENST00000261636.12	3241	6	30	1502	-28	296	multi-exon	FALSE	canonical	1	586068	junction_5	227368.03059498052	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	146	691	40.0	-19	True	ATTAAA	-37
PB.2834.7	chr12	-	1549	6	full-splice_match	ARL1	ENST00000261636.12	3241	6	48	1644	-10	154	multi-exon	FALSE	canonical	1	586068	junction_5	227368.03059498052	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	128	673	50.0	-1	True	AATAAA	-23
PB.780.60	chr1	-	2562	2	incomplete-splice_match	ADAR	ENST00000529168.2	6343	15	68	17946	12	1	3prime_fragment	FALSE	canonical	1	265041	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	97	1701	85.0	616	False	NA	NA
PB.10067.25	chr6	+	3845	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-56	-428	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	154944.30375017854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3189	655	3843	65.0	-9	True	NA	NA
PB.8944.1	chr4	-	1739	3	novel_not_in_catalog	NEUROG2	novel	2287	2	NA	NA	-7	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	5067.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	131	396	335	730	15.0	0	True	AATAAA	-17
PB.11642.3	chr9	+	3358	14	full-splice_match	SYK	ENST00000375754.8	5005	14	-38	1685	-38	-1685	multi-exon	FALSE	canonical	1	147916	junction_1	74633.00885615611	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	187	2094	60.0	-229	False	NA	NA
PB.10344.1	chr6	-	2055	1	genic	DLL1	novel	NA	NA	NA	NA	-15	-14825	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	-9294	False	AAAAAG	-30
PB.10607.41	chr7	+	2818	27	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-38	7569	35	-1417	3prime_fragment	FALSE	canonical	1	3722	junction_21	564771.035479384	NA	1	NA	TRUE	NA	NA	NA	C	coding	821	2463	355	2817	55.0	2	True	AATGAA	-17
PB.10607.40	chr7	+	3724	28	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-39	5996	34	156	3prime_fragment	FALSE	canonical	1	3722	junction_21	564114.6258769132	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	356	3061	55.0	1	True	NA	NA
PB.10607.43	chr7	+	3596	34	full-splice_match	GTF2I	ENST00000621734.4	4412	34	186	630	-87	103	multi-exon	FALSE	canonical	1	3722	junction_22	535599.0495560264	NA	2	NA	TRUE	NA	NA	NA	C	coding	977	2934	131	3064	10.0	-3	True	ACTAAA	-18
PB.10607.42	chr7	+	3943	35	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-35	169	any annotated donor/acceptor	FALSE	canonical	1	3722	junction_23	525119.8540595997	NA	1	NA	TRUE	NA	NA	NA	C	coding	997	2994	352	3345	20.0	5	True	ATTAAA	-32
PB.10047.2	chr6	+	2490	1	novel_in_catalog	PRIM2	novel	2308	14	NA	NA	84807	-27142	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.9402.1	chr5	-	4067	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	283	-17	-10	17	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	3	NA	TRUE	NA	NA	NA	C	coding	140	423	24	446	20.0	-11	True	NA	NA
PB.10047.1	chr6	+	2317	14	full-splice_match	PRIM2	ENST00000615550.4	2308	14	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_7	108857.56597004674	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	97	1626	25.0	-15	True	AATAAA	-12
PB.1304.2	chr10	-	5240	12	novel_in_catalog	FRMD4A	novel	6821	25	NA	NA	8	-12	intron_retention	FALSE	canonical	1	390	junction_3	70530.72370614382	NA	5	NA	TRUE	NA	NA	NA	A	coding	393	1182	615	1796	50.0	7	True	ATTAAA	-9
PB.392.20	chr1	-	2058	4	incomplete-splice_match	EFCAB14	ENST00000371933.7	5767	11	-75	20965	-75	-11952	3prime_fragment	FALSE	canonical	1	112291	junction_2	182609.9873452222	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	1053	1670	85.0	-36	True	AAGAAA	-4
PB.455.7	chr1	+	2481	6	full-splice_match	AK4	ENST00000395334.6	6998	6	-139	4656	21	598	multi-exon	FALSE	canonical	1	102	junction_5	13511.31268826238	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	498	1169	25.0	-1355	False	AATAAA	-9
PB.8071.9	chr3	-	7151	18	novel_not_in_catalog	FYCO1	novel	8578	19	NA	NA	-15	-3873	any annotated donor/acceptor	FALSE	canonical	1	3334	junction_1	56087.57483358327	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	315	4607	45.0	-16	True	AATAAA	-12
PB.8071.8	chr3	-	4736	18	full-splice_match	FYCO1	ENST00000296137.6	8504	18	-9	3777	0	-96	multi-exon	FALSE	canonical	1	92521	junction_17	26446.96712682973	NA	2	NA	TRUE	NA	NA	NA	C	coding	1478	4437	216	4652	40.0	-1	True	CATAAA	-19
PB.9068.1	chr4	+	1729	1	antisense	novelGene_AC105285.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-3346	False	NA	NA
PB.8071.6	chr3	-	8469	19	novel_not_in_catalog	FYCO1	novel	8578	19	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	41415.28807080369	NA	3	NA	TRUE	NA	NA	NA	C	coding	1478	4437	214	4650	20.0	1	True	AATAAA	-18
PB.8071.3	chr3	-	8513	18	full-splice_match	FYCO1	ENST00000296137.6	8504	18	-9	0	0	0	multi-exon	FALSE	canonical	1	92521	junction_17	26446.96712682973	NA	2	NA	TRUE	NA	NA	NA	C	coding	1478	4437	216	4652	20.0	-1	True	AATAAA	-19
PB.8071.2	chr3	-	8597	19	novel_not_in_catalog	FYCO1	novel	8578	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	7612	junction_18	48000.61110940717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1478	4437	300	4736	20.0	-1	True	AATAAA	-19
PB.5861.15	chr19	+	2487	5	incomplete-splice_match	GATAD2A	ENST00000404158.5	5776	14	70914	1949	26031	-363	5prime_fragment	FALSE	canonical	1	441431	junction_4	38332.1160158163	NA	0	NA	TRUE	NA	NA	NA	B	coding	262	789	195	983	20.0	-8189	False	AATAAA	-17
PB.5880.1	chr19	+	2408	5	full-splice_match	ZNF738	ENST00000311015.7	2442	5	53	-19	-9	17	multi-exon	FALSE	canonical	1	54308	junction_4	78801.39752250591	NA	2	NA	TRUE	NA	NA	NA	A	coding	137	414	159	572	15.0	-17	True	ATTAAA	-29
PB.11892.1	chr9	+	4759	4	novel_in_catalog	PPP1R26	novel	4744	4	NA	NA	13	-1	no_combination_of_known_junctions	FALSE	canonical	1	10832	junction_1	46086.36232118998	NA	0	NA	TRUE	NA	NA	NA	A	coding	1209	3630	378	4007	20.0	-2	True	AATAAA	-16
PB.6653.10	chr2	+	4110	23	novel_in_catalog	EIF5B	novel	5777	24	NA	NA	23	1	no_combination_of_known_junctions	FALSE	canonical	1	2636	junction_8	220484.58020695037	NA	3	NA	TRUE	NA	NA	NA	C	coding	1195	3588	162	3749	25.0	5	True	ATTAAA	-23
PB.608.8	chr1	-	3059	4	full-splice_match	LRIF1	ENST00000369763.4	3475	4	114	302	0	-265	multi-exon	FALSE	canonical	1	78626	junction_3	64235.98068061232	NA	2	NA	TRUE	NA	NA	NA	C	coding	769	2310	278	2587	20.0	-14	True	NA	NA
PB.10904.1	chr7	+	3073	22	novel_not_in_catalog	CUL1	novel	2857	22	NA	NA	217	-2	intron_retention	FALSE	canonical	1	2880	junction_1	170636.398245056	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	291	2621	15.0	-1617	False	AATAAA	-23
PB.5901.1	chr19	+	3220	6	full-splice_match	ZNF507	ENST00000311921.8	7638	6	5	4413	5	0	multi-exon	TRUE	canonical	1	12431	junction_1	64705.115776111554	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	188	3049	45.0	-20	True	AATAAA	-16
PB.5901.2	chr19	+	6802	6	full-splice_match	ZNF507	ENST00000311921.8	7638	6	12	824	12	-824	multi-exon	FALSE	canonical	1	12431	junction_1	64705.115776111554	NA	2	NA	TRUE	NA	NA	NA	C	coding	953	2862	181	3042	50.0	-13	True	AATAAA	-9
PB.5901.3	chr19	+	3311	7	full-splice_match	ZNF507	ENST00000355898.5	3194	7	-111	-6	14	6	multi-exon	FALSE	canonical	1	56017	junction_1	50783.35353899609	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	273	3134	45.0	-11	True	AATAAA	-22
PB.5901.4	chr19	+	6910	7	full-splice_match	ZNF507	ENST00000355898.5	3194	7	-109	-3607	-15	-806	multi-exon	FALSE	canonical	1	56017	junction_1	50783.35353899609	NA	2	NA	TRUE	NA	NA	NA	C	coding	953	2862	271	3132	35.0	-9	True	AATAAA	-27
PB.5901.5	chr19	+	2975	4	full-splice_match	ZNF507	ENST00000587084.5	5560	4	-15	2600	-15	-2600	multi-exon	FALSE	canonical	1	56017	junction_1	45810.394591911856	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	271	2565	75.0	-9	True	NA	NA
PB.5901.6	chr19	+	4381	7	full-splice_match	ZNF507	ENST00000355898.5	3194	7	-104	-1083	-10	1083	multi-exon	FALSE	canonical	1	56017	junction_1	50783.35353899609	NA	2	NA	TRUE	NA	NA	NA	C	coding	953	2862	266	3127	30.0	-4	True	ATTAAA	-34
PB.5901.7	chr19	+	4487	7	full-splice_match	ZNF507	ENST00000355898.5	3194	7	-94	-1199	0	1199	multi-exon	FALSE	canonical	1	56017	junction_1	50783.35353899609	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	256	3117	20.0	6	True	AGTAAA	-16
PB.5901.8	chr19	+	2007	1	novel_in_catalog	ZNF507	novel	7638	6	NA	NA	3	-12159	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	9	True	NA	NA
PB.8302.1	chr3	-	4869	9	full-splice_match	NEPRO	ENST00000314400.9	4992	9	116	7	-2	-3	multi-exon	TRUE	canonical	1	125253	junction_8	79909.18940888072	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	80	1780	20.0	-3	False	NA	NA
PB.1652.2	chr10	-	2005	1	novel_in_catalog	BBIP1	novel	2119	4	NA	NA	-23	739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.1652.1	chr10	-	2069	4	full-splice_match	BBIP1	ENST00000448814.5	2119	4	49	1	-24	-1	multi-exon	FALSE	canonical	1	309515	junction_3	46961.796522989476	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-17
PB.9548.7	chr5	+	4125	22	full-splice_match	FBXO38	ENST00000340253.9	4424	22	80	219	5	-210	multi-exon	FALSE	canonical	1	145490	junction_4	46678.460598452366	NA	0	NA	TRUE	NA	NA	NA	C	coding	1188	3567	89	3655	30.0	24	True	ATTAAA	-23
PB.11124.15	chr8	+	1542	9	incomplete-splice_match	MCM4	ENST00000648407.1	2598	15	68	10183	8	513	3prime_fragment	FALSE	canonical	1	413119	junction_2	253757.01145753465	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	64	1392	50.0	9	True	ATTAAA	-8
PB.10376.1	chr7	-	3821	1	intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	434	1305	994	2298	80.0	NA	False	NA	NA
PB.11473.8	chr9	-	1675	8	full-splice_match	PLIN2	ENST00000276914.6	1972	8	87	210	1	-210	multi-exon	FALSE	canonical	1	436806	junction_4	239160.48830619396	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	94	1407	10.0	2	True	NA	NA
PB.4718.2	chr17	-	2573	3	novel_not_in_catalog	ALOX12-AS1	novel	576	4	NA	NA	1	4355	intron_retention	FALSE	canonical	1	8790	junction_1	3945.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-5	True	NA	NA
PB.4718.1	chr17	-	2670	4	novel_not_in_catalog	ALOX12-AS1	novel	576	4	NA	NA	-2	4355	intron_retention	FALSE	canonical	1	8790	junction_1	25130.277546329555	NA	0	NA	TRUE	NA	NA	NA	B	coding	77	234	147	380	80.0	-8	True	NA	NA
PB.11104.6	chr8	+	3356	14	novel_in_catalog	GPAT4	novel	572	2	NA	NA	-2	518	intron_retention	FALSE	canonical	1	3731	junction_1	227866.99919904227	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	1075	2445	15.0	-2	True	AATAAA	-16
PB.11002.4	chr8	-	3346	16	full-splice_match	PSD3	ENST00000327040.12	11689	16	3	8340	3	-4	multi-exon	FALSE	canonical	1	29872	junction_15	38680.45278064304	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	101	3244	40.0	110	False	AATATA	-24
PB.2392.3	chr12	+	2502	10	novel_in_catalog	FKBP4	novel	3732	10	NA	NA	269	1643	combination_of_known_junctions	FALSE	canonical	1	23575	junction_1	664983.2144772296	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	1070	2314	5.0	-7328	False	NA	NA
PB.2392.2	chr12	+	1966	10	full-splice_match	FKBP4	ENST00000001008.5	3732	10	274	1492	158	-1479	multi-exon	FALSE	canonical	1	376299	junction_2	573820.7601679969	NA	6	2	TRUE	NA	NA	NA	C	coding	414	1245	49	1293	45.0	-8027	False	AATAAA	-5
PB.2392.1	chr12	+	1625	10	full-splice_match	FKBP4	ENST00000001008.5	3732	10	39	2068	39	1552	multi-exon	FALSE	canonical	1	376299	junction_2	573820.7601679969	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	149	1528	20.0	-2	True	NA	NA
PB.3374.3	chr14	-	2283	1	full-splice_match	ARHGAP5-AS1	ENST00000553596.2	1848	1	152	-587	152	587	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	24	True	AATAAA	-41
PB.3374.4	chr14	-	1688	1	full-splice_match	ARHGAP5-AS1	ENST00000553596.2	1848	1	163	-3	163	3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	35	True	AGTAAA	-17
PB.3374.5	chr14	-	1030	1	full-splice_match	ARHGAP5-AS1	ENST00000553596.2	1848	1	152	666	152	-666	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	24	True	AGTAAA	-17
PB.11473.6	chr9	-	1761	8	novel_not_in_catalog	PLIN2	novel	790	3	NA	NA	-1	4	any annotated donor/acceptor	FALSE	canonical	1	2196	junction_3	336317.6334361944	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	96	743	15.0	0	True	AATAAA	-20
PB.11473.7	chr9	-	1860	8	novel_not_in_catalog	PLIN2	novel	790	3	NA	NA	46	-143	any annotated donor/acceptor	FALSE	canonical	1	6375	junction_7	289667.2343149523	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	212	1525	15.0	62	False	AATAAA	-26
PB.8603.4	chr3	-	4216	8	incomplete-splice_match	ATP13A3	ENST00000256031.8	7322	32	38095	0	1037	0	5prime_fragment	FALSE	canonical	1	122770	junction_1	161162.41553938622	NA	2	NA	TRUE	NA	NA	NA	B	coding	285	858	120	977	30.0	-8202	False	AATAAA	-15
PB.1127.5	chr1	+	1869	5	full-splice_match	LYPLAL1	ENST00000366928.9	1898	5	25	4	0	-4	multi-exon	FALSE	canonical	1	256380	junction_2	113861.1154444308	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	23	736	25.0	-9	True	NA	NA
PB.309.1	chr1	+	4622	34	novel_in_catalog	MACF1	novel	24319	101	NA	NA	-41	1727	combination_of_known_junctions	FALSE	canonical	1	83301	junction_1	52058.06886968408	NA	0	NA	TRUE	NA	NA	NA	B	coding	1456	4368	255	4622	40.0	-29	True	ATTAAA	-37
PB.11752.2	chr9	-	5891	36	novel_in_catalog	CDK5RAP2	novel	5551	35	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	30577	junction_18	94250.45586896087	NA	0	NA	TRUE	NA	NA	NA	C	coding	1781	5346	184	5529	10.0	0	True	ATTAAA	-19
PB.11752.3	chr9	-	6140	38	full-splice_match	CDK5RAP2	ENST00000349780.8	6228	38	80	8	-17	-2	multi-exon	FALSE	canonical	1	117178	junction_22	78821.36431835327	NA	1	NA	TRUE	NA	NA	NA	C	coding	1892	5679	104	5782	15.0	80	False	ATTAAA	-15
PB.11752.6	chr9	-	6134	37	novel_in_catalog	CDK5RAP2	novel	5551	35	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	30577	junction_19	88423.2769836135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1860	5583	192	5774	15.0	-8	True	ATTAAA	-17
PB.5218.1	chr17	-	2028	4	full-splice_match	LINC00511	ENST00000650131.1	2257	4	227	2	96	-2	multi-exon	FALSE	canonical	1	32394	junction_3	13155.24460687321	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	226	False	ATTAAA	-20
PB.8700.1	chr4	-	1723	2	full-splice_match	HS3ST1	ENST00000002596.5	8031	2	638	5670	437	938	multi-exon	FALSE	canonical	1	49189	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	307	924	538	1461	70.0	-1	True	ACTAAA	-12
PB.5218.3	chr17	-	2424	4	full-splice_match	LINC00511	ENST00000647953.1	2292	4	-113	-19	-1	-2	multi-exon	FALSE	canonical	1	8347	junction_2	10824.108564783624	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	ATTAAA	-20
PB.5218.2	chr17	-	1949	3	full-splice_match	LINC00511	ENST00000650313.1	1995	3	46	0	-34	0	multi-exon	FALSE	canonical	1	1241	junction_2	9871.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1940	False	ATTAAA	-22
PB.12030.10	chrX	-	2404	7	full-splice_match	CXorf38	ENST00000378421.1	2380	7	-25	1	1	-1	multi-exon	FALSE	canonical	1	4892	junction_5	82625.81952123414	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	1576	2178	35.0	10	True	AATAAA	-17
PB.5218.4	chr17	-	2618	5	novel_in_catalog	LINC00511	novel	2929	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1444	junction_2	15193.57710514545	NA	21	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	ATTAAA	-16
PB.5218.7	chr17	-	1939	2	full-splice_match	LINC00511	ENST00000578206.2	1732	2	-208	1	1	0	multi-exon	FALSE	canonical	1	1022	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-36	False	ATTAAA	-16
PB.5218.6	chr17	-	1952	3	full-splice_match	LINC00511	ENST00000649793.1	2160	3	202	6	71	0	multi-exon	FALSE	canonical	1	34851	junction_2	14527.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	201	False	ATTAAA	-16
PB.5218.9	chr17	-	1978	5	full-splice_match	LINC00511	ENST00000649366.1	2028	5	48	2	3	0	multi-exon	FALSE	canonical	1	299	junction_4	15862.890869888754	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	ATTAAA	-15
PB.1076.8	chr1	-	1639	13	incomplete-splice_match	EIF2D	ENST00000271764.6	2005	15	-3	4066	1	2	3prime_fragment	FALSE	canonical	1	513151	junction_6	100212.22598066565	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1518	121	1638	50.0	1	True	AATAAA	-14
PB.11700.14	chr9	+	3555	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	29	-5647	intron_retention	FALSE	canonical	1	4192	junction_6	188808.26291760866	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	219	2240	50.0	0	True	AAAAAG	-17
PB.11000.6	chr8	-	2257	14	full-splice_match	ASAH1	ENST00000262097.11	2618	14	250	111	0	11	multi-exon	FALSE	canonical	1	671509	junction_9	286297.88506034005	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	63	1250	25.0	-14	True	NA	NA
PB.11000.7	chr8	-	2327	14	full-splice_match	ASAH1	ENST00000636691.1	2472	14	156	-11	-68	4	multi-exon	FALSE	canonical	1	2865	junction_13	469275.4753798605	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	249	1241	25.0	1708	False	AATAAA	-21
PB.11000.5	chr8	-	2263	14	novel_not_in_catalog	ASAH1	novel	3042	14	NA	NA	-2	8	intron_retention	FALSE	canonical	0	0	junction_10	465516.5886202924	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	25	1173	25.0	24	True	AATAAA	-25
PB.10318.11	chr6	+	5106	26	novel_not_in_catalog	MAP3K4	novel	5397	26	NA	NA	-4664	0	any annotated donor/acceptor	FALSE	canonical	1	17	junction_15	76350.13868261407	NA	1	1	TRUE	NA	NA	NA	C	coding	1064	3195	197	3391	25.0	-8578	False	AATAAA	-22
PB.10318.10	chr6	+	4743	15	incomplete-splice_match	MAP3K4	ENST00000544041.5	5444	28	-60	22289	0	-6973	3prime_fragment	FALSE	canonical	1	68962	junction_1	52452.57467737608	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	212	3613	65.0	15	True	NA	NA
PB.5611.1	chr19	+	3638	14	novel_in_catalog	FZR1	novel	5212	14	NA	NA	9	1520	combination_of_known_junctions	FALSE	canonical	1	39897	junction_13	123861.96666231172	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	228	1718	10.0	-29	True	ATTAAA	-19
PB.8112.1	chr3	-	865	2	full-splice_match	GPX1	ENST00000419783.2	1151	2	279	7	4	0	multi-exon	FALSE	canonical	1	562873	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	145	438	218	655	15.0	7	True	AATAAA	-18
PB.11000.9	chr8	-	2259	13	full-splice_match	ASAH1	ENST00000520781.6	2245	13	-10	-4	2	4	multi-exon	FALSE	canonical	1	7705	junction_8	437444.5315803781	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	61	1173	25.0	-12	True	AATAAA	-21
PB.6905.5	chr2	+	4800	8	full-splice_match	MFSD6	ENST00000392328.5	4797	8	-5	2	-5	-2	multi-exon	FALSE	canonical	1	12580	junction_1	91357.06175334274	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	330	2705	20.0	-5	True	NA	NA
PB.6905.4	chr2	+	4284	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	-6	-195	combination_of_known_junctions	FALSE	canonical	1	35200	junction_1	74319.8387745306	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	209	2584	30.0	-6	True	AATAAA	-27
PB.6905.7	chr2	+	3676	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	0	-797	combination_of_known_junctions	FALSE	canonical	1	35200	junction_1	74319.8387745306	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	203	2578	60.0	0	True	NA	NA
PB.6905.6	chr2	+	4106	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	-3	-370	combination_of_known_junctions	FALSE	canonical	1	35200	junction_1	74319.8387745306	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	206	2581	70.0	-3	True	AATAAA	-10
PB.5291.12	chr17	-	3179	17	novel_not_in_catalog	USP36	novel	5885	21	NA	NA	89	-23	intron_retention	FALSE	canonical	1	2238	junction_16	78916.22171088206	NA	1	NA	TRUE	NA	NA	NA	C	coding	954	2862	318	3179	85.0	880	False	NA	NA
PB.5291.10	chr17	-	3245	17	novel_in_catalog	USP36	novel	5885	21	NA	NA	-22	-23	intron_retention	FALSE	canonical	1	1673	junction_16	79029.89622753135	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2862	384	3245	85.0	703	False	NA	NA
PB.5291.11	chr17	-	3132	17	full-splice_match	USP36	ENST00000588086.5	3187	17	32	23	32	-23	multi-exon	FALSE	canonical	1	127073	junction_16	56374.06236124354	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2862	271	3132	85.0	-28	True	NA	NA
PB.10878.27	chr7	+	3252	15	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	5309	junction_3	574758.0331713201	NA	16	1	TRUE	NA	NA	NA	C	coding	455	1368	773	2140	45.0	-38	True	AATAAA	-17
PB.10878.26	chr7	+	2862	13	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	5309	junction_3	552883.7199380927	NA	2	1	TRUE	NA	NA	NA	C	coding	373	1122	881	2002	10.0	-45	True	ATTAAA	-33
PB.10878.25	chr7	+	4043	11	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-1	-36	intron_retention	FALSE	canonical	1	4252	junction_1	475725.620881081	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	2249	3268	80.0	-45	True	TATAAA	-18
PB.10878.24	chr7	+	3291	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	1	-622	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	431367.5898119524	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	354	1361	20.0	-47	True	ATTAAA	-19
PB.10878.23	chr7	+	2612	10	full-splice_match	LUC7L2	ENST00000354926.8	2645	10	33	0	29	0	multi-exon	FALSE	canonical	1	372878	junction_1	291120.3321271162	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	322	1500	45.0	-15	True	AATAAA	-17
PB.10878.22	chr7	+	3470	9	incomplete-splice_match	LUC7L2	ENST00000354926.8	2645	10	-2	3610	-2	-2669	3prime_fragment	FALSE	canonical	1	372878	junction_1	298982.502059668	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	357	1364	30.0	-50	True	NA	NA
PB.10878.21	chr7	+	2221	9	incomplete-splice_match	LUC7L2	ENST00000354926.8	2645	10	-4	4861	-4	-3920	3prime_fragment	FALSE	canonical	1	372878	junction_1	298982.502059668	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	359	1366	25.0	-52	True	AATAAA	-17
PB.10878.20	chr7	+	3077	8	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-8	0	intron_retention	FALSE	canonical	1	8970	junction_1	394386.2777407501	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	2183	2836	100.0	-56	True	NA	NA
PB.10736.1	chr7	+	1685	9	full-splice_match	TRIP6	ENST00000200457.8	1942	9	251	6	0	-5	multi-exon	FALSE	canonical	1	395477	junction_2	263038.4543539927	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	110	1540	35.0	-17	True	AAGAAA	-21
PB.767.4	chr1	+	2664	9	incomplete-splice_match	SLC27A3	ENST00000368661.7	2410	10	99	-1	72	-1	intron_retention	FALSE	canonical	1	80112	junction_1	58115.61344195186	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	108	2258	20.0	-16	True	AATAAA	-35
PB.767.5	chr1	+	2836	9	novel_in_catalog	SLC27A3	novel	3351	10	NA	NA	88	-1	intron_retention	FALSE	canonical	1	80112	junction_1	67573.94313407721	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	92	1156	20.0	0	True	AATAAA	-35
PB.767.1	chr1	+	2279	10	full-splice_match	SLC27A3	ENST00000624995.3	2413	10	143	-9	116	9	multi-exon	FALSE	canonical	1	80112	junction_1	64524.06342531118	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	64	2115	20.0	-2715	False	NA	NA
PB.767.2	chr1	+	3231	7	novel_in_catalog	SLC27A3	novel	3351	10	NA	NA	55	0	intron_retention	FALSE	canonical	1	80112	junction_1	70235.69768920138	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	125	1189	20.0	-33	True	AATAAA	-36
PB.767.3	chr1	+	2215	10	novel_in_catalog	SLC27A3	novel	3351	10	NA	NA	67	1	intron_retention	FALSE	canonical	1	8308	junction_9	74486.27128604818	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	62	2059	15.0	-21	True	AATAAA	-38
PB.2903.7	chr12	-	2826	7	novel_in_catalog	PPP1CC	novel	2559	7	NA	NA	16	-1	intron_retention	FALSE	canonical	1	1968	junction_6	1018086.3092112929	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-33	False	ATTAAA	-13
PB.2903.6	chr12	-	2268	7	novel_in_catalog	PPP1CC	novel	2559	7	NA	NA	7	96	intron_retention	FALSE	canonical	1	29670	junction_2	814592.5855047622	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	185	787	15.0	-1	True	AATAAA	-15
PB.2903.5	chr12	-	3593	5	full-splice_match	PPP1CC	ENST00000551676.5	1581	5	-54	-1958	5	96	multi-exon	FALSE	canonical	1	1258431	junction_4	287973.8676933204	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	187	999	15.0	-3	True	AATAAA	-15
PB.2903.2	chr12	-	2323	7	full-splice_match	PPP1CC	ENST00000335007.9	2559	7	9	227	9	1	multi-exon	FALSE	canonical	1	1258431	junction_6	427393.1343332766	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	183	1154	20.0	1	True	ATTAAA	-15
PB.2903.1	chr12	-	2543	6	novel_in_catalog	PPP1CC	novel	2559	7	NA	NA	-7	1	intron_retention	FALSE	canonical	1	1258431	junction_5	453069.70049942646	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	201	1013	20.0	-17	False	ATTAAA	-15
PB.2903.9	chr12	-	1414	6	full-splice_match	PPP1CC	ENST00000550991.5	1882	6	-44	512	-17	-43	multi-exon	FALSE	canonical	1	1258431	junction_5	320168.0175716494	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	211	1125	30.0	-27	False	ATTAAA	-16
PB.2903.8	chr12	-	1615	7	full-splice_match	PPP1CC	ENST00000335007.9	2559	7	-24	968	17	82	multi-exon	FALSE	canonical	1	1258431	junction_6	427393.1343332766	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	216	1187	35.0	-32	False	CATAAA	-18
PB.597.3	chr1	+	3341	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-28	23861	-28	-23861	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	139	1203	10.0	-52	True	AAGAAA	-38
PB.597.2	chr1	+	2244	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	113	24817	113	-24817	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	49	1062	25.0	89	False	ATTAAA	-10
PB.5222.8	chr17	+	2092	6	full-splice_match	C17orf80	ENST00000426147.6	2075	6	-12	-5	-12	5	multi-exon	FALSE	canonical	1	9921	junction_5	59140.078094639	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	203	1933	45.0	-562	False	AATAAA	-31
PB.597.7	chr1	+	1854	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-8	25328	-8	-25328	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	119	1183	30.0	-32	True	NA	NA
PB.597.6	chr1	+	2697	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-9	24486	-9	-24486	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	120	1184	40.0	-33	True	ATTAAA	-28
PB.597.5	chr1	+	4692	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-9	22491	-9	-22491	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	120	1184	85.0	-33	True	ATTAAA	-37
PB.1695.2	chr10	+	2147	11	full-splice_match	ACADSB	ENST00000358776.6	5859	11	-44	3756	-7	436	multi-exon	FALSE	canonical	1	154278	junction_3	44706.42988922287	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	59	1357	50.0	-34	True	NA	NA
PB.5222.2	chr17	+	3461	6	novel_in_catalog	C17orf80	novel	2163	5	NA	NA	-33	-73	combination_of_known_junctions	FALSE	canonical	1	66884	junction_1	41186.36018198258	NA	1	NA	TRUE	NA	NA	NA	C	coding	602	1809	193	2001	20.0	-26	True	NA	NA
PB.5222.3	chr17	+	3323	4	novel_not_in_catalog	C17orf80	novel	2163	5	NA	NA	-33	2614	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	77728.79758636578	NA	3	NA	TRUE	NA	NA	NA	C	coding	530	1593	191	1783	15.0	-26	True	AATAAA	-17
PB.10172.1	chr6	-	2743	3	full-splice_match	LINC01268	ENST00000434296.2	2755	3	8	4	8	-4	multi-exon	FALSE	canonical	1	7857	junction_2	3531.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	3	True	NA	NA
PB.5222.1	chr17	+	3481	5	full-splice_match	C17orf80	ENST00000577615.5	2049	5	-83	-1349	-83	5	multi-exon	FALSE	canonical	1	45153	junction_3	59220.3921271001	NA	2	1	TRUE	NA	NA	NA	C	coding	566	1701	243	1943	25.0	-830	False	AATAAA	-18
PB.5222.6	chr17	+	3022	6	full-splice_match	C17orf80	ENST00000359042.6	3645	6	20	603	5	-530	multi-exon	FALSE	canonical	1	66078	junction_1	41424.71686614164	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	211	2019	55.0	-570	False	NA	NA
PB.5222.7	chr17	+	3535	6	full-splice_match	C17orf80	ENST00000359042.6	3645	6	41	69	1	4	multi-exon	FALSE	canonical	1	66078	junction_1	41424.71686614164	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	190	1998	25.0	-15	True	AATAAA	-17
PB.5222.4	chr17	+	3432	5	novel_not_in_catalog	C17orf80	novel	2163	5	NA	NA	-11	5	any annotated donor/acceptor	FALSE	canonical	1	778	junction_1	76609.75966995001	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	194	1894	25.0	-4	True	AATAAA	-18
PB.5222.5	chr17	+	3496	5	full-splice_match	C17orf80	ENST00000268942.12	3449	5	25	-72	0	-1	multi-exon	FALSE	canonical	1	45153	junction_3	59380.00643472094	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	191	1891	55.0	-16	True	AATAAA	-9
PB.11481.1	chr9	-	1707	2	intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	418	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10536.1	chr7	-	3739	11	novel_in_catalog	SEPT7P2	novel	505	3	NA	NA	-33	-5	intron_retention	FALSE	canonical	1	6941	junction_1	40434.09852636757	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-42	False	AATAAA	-18
PB.7045.3	chr2	-	7522	56	full-splice_match	DOCK10	ENST00000258390.11	7260	56	-263	1	-260	-1	multi-exon	FALSE	canonical	1	43221	junction_55	45806.31111737572	NA	1	NA	TRUE	NA	NA	NA	C	coding	2186	6561	332	6892	20.0	13	False	AATAAA	-18
PB.11762.15	chr9	+	2500	17	novel_in_catalog	GSN	novel	3341	25	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	1	19948	junction_1	857344.2768374543	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	60	2255	5.0	6	True	AATAAA	-23
PB.11762.14	chr9	+	2748	19	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	891	junction_2	1093212.0842371	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	313	2508	10.0	6	True	AATAAA	-18
PB.3852.1	chr15	+	2147	2	full-splice_match	AC084757.3	ENST00000558061.1	1943	2	38	-242	38	242	multi-exon	FALSE	canonical	1	1701	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-32
PB.11762.16	chr9	+	2644	19	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	4	4	any annotated donor/acceptor	FALSE	canonical	1	5326	junction_1	1100114.7025011363	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	205	2400	5.0	8	True	AATAAA	-22
PB.11762.11	chr9	+	2671	19	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	3703	junction_3	1093446.2394424854	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	237	2432	10.0	1	True	AATAAA	-17
PB.11762.10	chr9	+	2705	19	full-splice_match	GSN	ENST00000449733.7	2702	19	-3	0	2	0	multi-exon	FALSE	canonical	1	8029	junction_3	1091616.6536332227	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	162	2465	10.0	1	True	AATAAA	-18
PB.11762.13	chr9	+	2852	20	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	881	junction_2	1191827.3928323756	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	418	2613	10.0	4	True	AATAAA	-17
PB.6284.3	chr2	-	1722	9	novel_in_catalog	SH3YL1	novel	500	2	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	1	20819	junction_8	103991.75270656984	NA	0	NA	TRUE	NA	NA	NA	C	coding	2	9	1049	1057	25.0	-58	False	AATAAA	-23
PB.8752.1	chr4	-	6584	17	novel_in_catalog	APBB2	novel	8972	18	NA	NA	-1	-2279	combination_of_known_junctions	FALSE	canonical	1	53240	junction_10	60361.32955222656	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	583	2799	30.0	-2	True	AATAAA	-12
PB.10347.4	chr6	+	1781	8	full-splice_match	TBP	ENST00000230354.10	1861	8	-6	86	-6	-48	multi-exon	FALSE	canonical	1	62680	junction_1	75090.37329098578	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	243	1262	45.0	1	True	AATATA	-11
PB.1103.3	chr1	+	3837	11	full-splice_match	TRAF5	ENST00000261464.9	3972	11	-26	161	-22	0	multi-exon	FALSE	canonical	1	61758	junction_1	53300.37398039529	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	81	1754	20.0	-22	True	TTTAAA	-12
PB.10412.1	chr7	-	3944	9	novel_in_catalog	ANKMY2	novel	2555	10	NA	NA	-29	-6	intron_retention	FALSE	canonical	1	160806	junction_5	22411.32845480997	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	212	1411	50.0	31	False	AATAAA	-11
PB.10412.2	chr7	-	2675	10	novel_not_in_catalog	ANKMY2	novel	2555	10	NA	NA	786	-6	any annotated donor/acceptor	FALSE	canonical	1	3036	junction_9	64913.564295763696	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	362	1702	50.0	1028	False	AATAAA	-11
PB.10412.3	chr7	-	2434	10	full-splice_match	ANKMY2	ENST00000306999.6	2555	10	109	12	-46	-6	multi-exon	FALSE	canonical	1	160806	junction_6	21747.637380973614	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	136	1461	50.0	107	False	AATAAA	-11
PB.11002.1	chr8	-	6806	13	novel_in_catalog	PSD3	novel	11689	16	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	6701	junction_12	45597.78386876993	NA	12	NA	TRUE	NA	NA	NA	C	coding	488	1467	308	1774	85.0	1	True	NA	NA
PB.3872.15	chr15	+	3741	6	novel_in_catalog	MAPK6	novel	552	3	NA	NA	-224	-1763	combination_of_known_junctions	FALSE	canonical	1	43100	junction_1	83038.51137779385	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	967	3132	30.0	-29	True	AATAAA	-15
PB.3872.14	chr15	+	4120	6	novel_in_catalog	MAPK6	novel	552	3	NA	NA	48	-1112	combination_of_known_junctions	FALSE	canonical	1	43100	junction_1	83038.51137779385	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	695	2860	20.0	0	True	AATAAA	-14
PB.3872.11	chr15	+	4083	6	novel_not_in_catalog	MAPK6	novel	552	3	NA	NA	9	-1230	any annotated donor/acceptor	FALSE	canonical	1	6992	junction_1	96284.72901556092	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	776	2941	20.0	18	True	AATAAA	-14
PB.3872.10	chr15	+	4199	6	full-splice_match	MAPK6	ENST00000261845.6	5345	6	32	1114	-5	-1114	multi-exon	FALSE	canonical	1	166374	junction_1	43925.7767767401	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	776	2941	30.0	4	True	AATAAA	-12
PB.3872.13	chr15	+	2431	6	novel_in_catalog	MAPK6	novel	552	3	NA	NA	-240	-3089	combination_of_known_junctions	FALSE	canonical	1	43100	junction_1	83038.51137779385	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1449	983	2431	65.0	-9725	False	NA	NA
PB.3872.12	chr15	+	4061	6	novel_in_catalog	MAPK6	novel	552	3	NA	NA	-8	-1227	combination_of_known_junctions	FALSE	canonical	1	43100	junction_1	83038.51137779385	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	751	2916	15.0	-9493	False	AATAAA	-17
PB.11015.1	chr8	-	3250	5	novel_in_catalog	REEP4	novel	1476	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	338382	junction_2	90358.85831885826	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	2466	2783	10.0	-1	True	AATAAA	-14
PB.11015.2	chr8	-	1700	8	full-splice_match	REEP4	ENST00000306306.7	1710	8	9	1	9	-1	multi-exon	FALSE	canonical	1	264856	junction_3	103218.40742081712	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	461	1234	5.0	8	True	AATAAA	-13
PB.11015.3	chr8	-	2056	7	novel_in_catalog	REEP4	novel	1476	7	NA	NA	6	-2	intron_retention	FALSE	canonical	1	338382	junction_2	88124.57383805547	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	464	1141	5.0	5	True	AATAAA	-12
PB.2913.1	chr12	+	1142	3	full-splice_match	ERP29	ENST00000261735.3	1735	3	130	463	17	-180	multi-exon	FALSE	canonical	1	487440	junction_2	211635.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	261	786	21	806	20.0	0	True	ATTAAA	-23
PB.6799.5	chr2	+	5988	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	174130.8624659506	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	190	2304	30.0	-19	True	AATAAA	-26
PB.575.2	chr1	-	2265	5	intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	936	junction_1	6369.784415504186	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	7	True	NA	NA
PB.575.1	chr1	-	1762	5	intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12650	junction_4	2867.6244959896685	NA	1	NA	FALSE	NA	NA	NA	A	coding	164	495	445	939	75.0	-7	False	NA	NA
PB.8752.3	chr4	-	6123	18	full-splice_match	APBB2	ENST00000508593.5	3592	18	11	-2542	-1	1825	multi-exon	FALSE	canonical	1	89612	junction_15	54165.99949833825	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	534	2813	25.0	2190	False	ATTAAA	-17
PB.2930.1	chr12	-	4793	8	full-splice_match	TBX3	ENST00000257566.7	4208	8	-585	0	-11	0	multi-exon	FALSE	canonical	1	136750	junction_5	84565.60259517882	NA	3	NA	TRUE	NA	NA	NA	C	coding	743	2232	976	3207	15.0	-1	True	AATAAA	-17
PB.2930.3	chr12	-	5960	6	novel_in_catalog	TBX3	novel	4723	7	NA	NA	-11	0	intron_retention	FALSE	canonical	1	254009	junction_3	48431.50252222204	NA	3	NA	TRUE	NA	NA	NA	C	coding	499	1500	2875	4374	15.0	-1	True	AATAAA	-17
PB.2930.2	chr12	-	4977	7	full-splice_match	TBX3	ENST00000349155.6	4723	7	-255	1	-255	0	multi-exon	FALSE	canonical	1	224887	junction_5	52849.43410424457	NA	2	NA	TRUE	NA	NA	NA	C	coding	723	2172	1220	3391	15.0	4	True	AATAAA	-17
PB.2930.5	chr12	-	5053	7	novel_in_catalog	TBX3	novel	4723	7	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	140839	junction_5	74753.48550049169	NA	19	NA	TRUE	NA	NA	NA	C	coding	499	1500	1969	3468	15.0	-1	True	AATAAA	-16
PB.6014.25	chr19	+	2777	15	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	75250	junction_1	562326.6284421014	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	53	2323	75.0	-6	True	NA	NA
PB.2930.7	chr12	-	4267	7	full-splice_match	TBX3	ENST00000349155.6	4723	7	-230	686	-230	-685	multi-exon	FALSE	canonical	1	224887	junction_5	52849.43410424457	NA	5	NA	TRUE	NA	NA	NA	C	coding	723	2172	1195	3366	45.0	1494	False	AATAAA	-15
PB.2930.6	chr12	-	4137	8	full-splice_match	TBX3	ENST00000257566.7	4208	8	-612	683	-38	-683	multi-exon	FALSE	canonical	1	136750	junction_5	84565.60259517882	NA	2	NA	TRUE	NA	NA	NA	C	coding	743	2232	1003	3234	45.0	3	True	AATAAA	-17
PB.2930.9	chr12	-	3646	8	full-splice_match	TBX3	ENST00000257566.7	4208	8	-614	1176	-40	-1176	multi-exon	FALSE	canonical	1	136750	junction_5	84565.60259517882	NA	2	NA	TRUE	NA	NA	NA	C	coding	743	2232	1005	3236	65.0	1	True	AAAACA	-10
PB.2930.8	chr12	-	4369	7	novel_in_catalog	TBX3	novel	4723	7	NA	NA	-11	-685	intron_retention	FALSE	canonical	1	140839	junction_5	74753.48550049169	NA	5	NA	TRUE	NA	NA	NA	C	coding	499	1500	1969	3468	45.0	-1	True	AATAAA	-15
PB.7229.5	chr20	+	2028	13	novel_in_catalog	HCK	novel	2215	14	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	3058	junction_6	163774.3701549143	NA	5	2	TRUE	NA	NA	NA	C	coding	360	1083	613	1695	20.0	28	True	AATAAA	-26
PB.7229.4	chr20	+	2108	13	full-splice_match	HCK	ENST00000520553.5	2101	13	-12	5	-12	-1	multi-exon	FALSE	canonical	1	223218	junction_5	61115.059782075536	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	259	1776	20.0	-12	True	AATAAA	-25
PB.7229.3	chr20	+	4643	10	incomplete-splice_match	HCK	ENST00000534862.6	1581	13	-220	9544	8	-9544	3prime_fragment	FALSE	canonical	1	223218	junction_5	61787.09402775843	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	284	1324	80.0	-37	True	NA	NA
PB.7229.2	chr20	+	2139	14	full-splice_match	HCK	ENST00000262651.3	2160	14	-20	41	-20	-41	multi-exon	FALSE	canonical	1	7157	junction_2	128013.93720087137	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	342	1850	65.0	-20	True	NA	NA
PB.7229.1	chr20	+	1878	13	novel_not_in_catalog	HCK	novel	2215	14	NA	NA	-699	0	any annotated donor/acceptor	FALSE	canonical	1	24	junction_1	107963.32110207099	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	28	1545	20.0	-7072	False	AATAAA	-26
PB.1303.1	chr10	+	3158	9	incomplete-splice_match	PRPF18	ENST00000378572.7	1717	10	12	12253	0	4555	3prime_fragment	FALSE	canonical	1	238558	junction_8	51435.157452733634	NA	4	NA	TRUE	NA	NA	NA	C	coding	328	987	149	1135	100.0	-26	True	NA	NA
PB.8284.17	chr3	-	6808	10	novel_in_catalog	CD47	novel	5225	9	NA	NA	-6	0	intron_retention	FALSE	canonical	1	240079	junction_2	427012.32694717316	NA	2	1	TRUE	NA	NA	NA	C	coding	310	933	124	1056	20.0	-3	True	AATAAA	-13
PB.6468.6	chr2	-	2405	8	full-splice_match	RTN4	ENST00000357732.8	2390	8	-20	5	-20	-5	multi-exon	FALSE	canonical	1	80632	junction_6	2292861.116145218	NA	6	NA	TRUE	NA	NA	NA	C	coding	392	1179	265	1443	30.0	-3	True	AATAAA	-12
PB.6468.5	chr2	-	1754	7	full-splice_match	RTN4	ENST00000394609.6	1898	7	138	6	138	-4	multi-exon	FALSE	canonical	1	665818	junction_6	1741730.3310500756	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	192	791	30.0	-1	True	AATAAA	-13
PB.6468.4	chr2	-	2118	5	novel_in_catalog	RTN4	novel	1898	7	NA	NA	-74	-4	intron_retention	FALSE	canonical	1	48908	junction_2	2167040.5816238625	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	151	1155	30.0	0	True	AATAAA	-13
PB.6468.3	chr2	-	2027	7	full-splice_match	RTN4	ENST00000317610.11	2333	7	301	5	133	-5	multi-exon	FALSE	canonical	1	1030166	junction_6	1616799.530346441	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	178	1065	30.0	1023	False	AATAAA	-12
PB.6468.2	chr2	-	4693	9	full-splice_match	RTN4	ENST00000337526.10	4790	9	93	4	-75	-4	multi-exon	FALSE	canonical	1	120154	junction_8	2399298.146302151	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	152	3730	30.0	-1	True	AATAAA	-13
PB.6468.1	chr2	-	2215	6	novel_in_catalog	RTN4	novel	1898	7	NA	NA	45	-3	intron_retention	FALSE	canonical	1	34916	junction_3	2091038.3472932868	NA	11	2	TRUE	NA	NA	NA	C	coding	319	960	200	1159	25.0	-3	True	AATAAA	-14
PB.1113.4	chr1	-	1234	6	full-splice_match	NSL1	ENST00000366977.7	2317	6	0	1083	0	444	multi-exon	FALSE	canonical	1	331972	junction_2	67983.84016220325	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	20	865	85.0	-6	True	NA	NA
PB.5293.10	chr17	-	3644	5	novel_in_catalog	LGALS3BP	novel	1961	5	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	1	1162053	junction_2	379665.90608652233	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	2148	3323	30.0	22	False	ATTAAA	-19
PB.5293.11	chr17	-	2606	5	novel_in_catalog	LGALS3BP	novel	1961	5	NA	NA	5	0	intron_retention	FALSE	canonical	1	2705	junction_1	741057.1996827826	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	1021	2286	35.0	-20	True	ATTAAA	-18
PB.5293.12	chr17	-	1985	5	full-splice_match	LGALS3BP	ENST00000591778.5	1961	5	-42	18	-13	0	multi-exon	FALSE	canonical	1	12417	junction_1	737141.8039479837	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	682	1665	35.0	-38	True	ATTAAA	-18
PB.1303.3	chr10	+	2364	10	full-splice_match	PRPF18	ENST00000378572.7	1717	10	63	-710	22	710	multi-exon	FALSE	canonical	1	238558	junction_8	48642.993976395555	NA	3	NA	TRUE	NA	NA	NA	C	coding	342	1029	98	1126	10.0	25	True	NA	NA
PB.5293.14	chr17	-	2397	6	novel_in_catalog	LGALS3BP	novel	1961	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	3795	junction_4	755604.9724562167	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	336	2078	35.0	-1	True	ATTAAA	-17
PB.6468.9	chr2	-	1674	8	full-splice_match	RTN4	ENST00000357732.8	2390	8	93	623	-75	2	multi-exon	FALSE	canonical	1	80632	junction_6	2292861.116145218	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	152	1330	80.0	-1	True	NA	NA
PB.6468.8	chr2	-	4147	9	full-splice_match	RTN4	ENST00000337526.10	4790	9	20	623	20	2	multi-exon	FALSE	canonical	1	120154	junction_8	2399298.146302151	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	225	3803	80.0	10	True	NA	NA
PB.10831.11	chr7	-	5261	22	novel_in_catalog	TNPO3	novel	4153	23	NA	NA	-18	-19	intron_retention	FALSE	canonical	1	351805	junction_18	100009.40756383793	NA	1	NA	TRUE	NA	NA	NA	C	coding	923	2772	342	3113	85.0	-1	True	NA	NA
PB.10044.5	chr6	+	3612	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	129	1527	0	-53	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	0	NA	TRUE	NA	NA	NA	C	coding	1061	3186	116	3301	30.0	-53	True	ATTAAA	-18
PB.561.2	chr1	+	1999	8	full-splice_match	SLC35A3	ENST00000533028.7	14759	8	436	12324	-8	54	multi-exon	FALSE	canonical	1	84940	junction_1	50585.123224852076	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	185	1162	55.0	-16	True	ATTAAA	-29
PB.6014.24	chr19	+	3403	15	novel_not_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	-46	21	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	577733.8035388702	NA	3	1	TRUE	NA	NA	NA	C	coding	756	2271	79	2349	0.0	-48	False	AAGAAA	-15
PB.561.4	chr1	+	3331	17	novel_in_catalog	SLC35A3	novel	2298	8	NA	NA	-8	47598	no_combination_of_known_junctions	FALSE	canonical	1	4992	junction_6	238706.42213317406	NA	16	1	TRUE	NA	NA	NA	C	coding	418	1257	1049	2305	15.0	-16	True	TATAAA	-14
PB.561.5	chr1	+	2569	7	full-splice_match	SLC35A3	ENST00000640732.1	1777	7	-33	-759	-8	-8	multi-exon	FALSE	canonical	1	4967	junction_3	84138.96237260647	NA	3	NA	TRUE	NA	NA	NA	C	coding	284	855	185	1039	95.0	-16	True	NA	NA
PB.561.6	chr1	+	3313	8	novel_in_catalog	SLC35A3	novel	2298	8	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	1835	junction_7	79076.56087976656	NA	2	NA	TRUE	NA	NA	NA	C	coding	328	987	184	1170	25.0	-15	True	TATAAA	-31
PB.7903.1	chr3	-	3258	11	full-splice_match	CRBN	ENST00000231948.8	2206	11	-1	-1051	-1	32	multi-exon	FALSE	canonical	1	252690	junction_5	82692.23860925522	NA	3	NA	TRUE	NA	NA	NA	C	coding	442	1329	25	1353	35.0	-21	False	AATATA	-2
PB.561.8	chr1	+	2236	9	full-splice_match	SLC35A3	ENST00000427993.7	2062	9	19	-193	-7	-1	multi-exon	FALSE	canonical	1	26985	junction_1	73254.85669810143	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	283	1260	30.0	-15	True	ATTAAA	-17
PB.561.9	chr1	+	2133	8	full-splice_match	SLC35A3	ENST00000533028.7	14759	8	443	12183	-1	1	multi-exon	FALSE	canonical	1	84940	junction_1	50585.123224852076	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	178	1155	40.0	-9	True	ATTAAA	-19
PB.11866.12	chr9	-	5466	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-7	64966	-7	-43552	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	1758	5274	191	5464	25.0	-7	True	NA	NA
PB.11866.13	chr9	-	4152	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-1	66274	-1	-44860	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	1322	3966	185	4150	60.0	-1	True	NA	NA
PB.11866.14	chr9	-	3919	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	11	66495	11	-45081	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	12	3	TRUE	NA	NA	NA	C	coding	1249	3747	173	3919	65.0	11	True	AAGAAA	-16
PB.7903.2	chr3	-	2515	11	full-splice_match	CRBN	ENST00000231948.8	2206	11	2	-311	2	311	multi-exon	FALSE	canonical	1	252690	junction_5	82692.23860925522	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	22	1350	15.0	-18	False	AGTAAA	-28
PB.11866.16	chr9	-	3688	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-9	66746	-9	-45332	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	1165	3495	193	3687	50.0	-9	True	AGTAAA	-24
PB.11866.17	chr9	-	3349	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-1	67077	-1	-45663	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	1055	3165	185	3349	50.0	-1	True	NA	NA
PB.9121.2	chr5	+	2061	13	full-splice_match	TRIP13	ENST00000166345.7	2672	13	207	404	-34	-184	multi-exon	FALSE	canonical	1	257238	junction_1	59108.92591013645	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	150	1448	40.0	-34	True	AATAAA	-24
PB.3770.1	chr15	-	3801	5	full-splice_match	SRP14	ENST00000267884.10	1077	5	7	-2731	7	2731	multi-exon	FALSE	canonical	1	2277137	junction_1	906786.2417729371	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	66	476	65.0	-6	True	AATAAA	-12
PB.3770.2	chr15	-	1029	5	full-splice_match	SRP14	ENST00000267884.10	1077	5	44	4	9	-4	multi-exon	FALSE	canonical	1	2277137	junction_1	906786.2417729371	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	29	439	20.0	2	True	AATAAA	-11
PB.3770.3	chr15	-	755	5	full-splice_match	SRP14	ENST00000267884.10	1077	5	19	303	-5	0	multi-exon	FALSE	canonical	1	2277137	junction_1	906786.2417729371	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	54	464	15.0	6	True	ATTAAA	-15
PB.5845.3	chr19	-	1660	10	novel_not_in_catalog	FKBP8	novel	1781	9	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1353211.447001868	NA	2	1	TRUE	NA	NA	NA	C	coding	413	1242	114	1355	20.0	-1	True	AATAAA	-15
PB.1113.3	chr1	-	1522	6	full-splice_match	NSL1	ENST00000366977.7	2317	6	-4	799	-4	728	multi-exon	FALSE	canonical	1	331972	junction_2	67983.84016220325	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	24	869	15.0	-10	True	AATAAA	-20
PB.9121.4	chr5	+	2428	13	full-splice_match	TRIP13	ENST00000166345.7	2672	13	241	3	0	-3	multi-exon	FALSE	canonical	1	257238	junction_1	59108.92591013645	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	116	1414	30.0	0	True	ACTAAA	-20
PB.8752.5	chr4	-	6070	16	novel_in_catalog	APBB2	novel	8972	18	NA	NA	-11	1825	combination_of_known_junctions	FALSE	canonical	1	43553	junction_13	64784.86655371162	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	544	2760	25.0	2082	False	ATTAAA	-17
PB.1113.2	chr1	-	1654	6	full-splice_match	NSL1	ENST00000366977.7	2317	6	0	663	0	-663	multi-exon	FALSE	canonical	1	331972	junction_2	67983.84016220325	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	20	865	25.0	-6	True	AATATA	-19
PB.1587.2	chr10	+	3723	11	full-splice_match	CNNM1	ENST00000356713.4	5959	11	259	1977	259	-1977	multi-exon	FALSE	canonical	1	26778	junction_3	5283.6287199234575	NA	2	NA	TRUE	NA	NA	NA	C	coding	951	2856	31	2886	70.0	0	True	NA	NA
PB.8597.1	chr3	-	3438	4	full-splice_match	CLDN1	ENST00000295522.3	3481	4	29	14	29	-14	multi-exon	FALSE	canonical	1	285501	junction_3	60040.838109480865	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	376	876	45.0	-6	True	AATAAA	-14
PB.1587.1	chr10	+	4345	11	full-splice_match	CNNM1	ENST00000356713.4	5959	11	246	1368	246	-1368	multi-exon	FALSE	canonical	1	26778	junction_3	5283.6287199234575	NA	1	NA	TRUE	NA	NA	NA	C	coding	951	2856	44	2899	80.0	-13	False	NA	NA
PB.4528.4	chr16	+	2997	13	novel_in_catalog	AC012184.2	novel	565	5	NA	NA	47659	794	no_combination_of_known_junctions	FALSE	canonical	1	2977	junction_9	196497.20043063306	NA	0	NA	TRUE	NA	NA	NA	A	coding	388	1167	441	1607	35.0	-22	True	AATATA	-11
PB.4528.5	chr16	+	2630	12	full-splice_match	DDX19A	ENST00000302243.11	2997	12	54	313	0	0	multi-exon	FALSE	canonical	1	2977	junction_8	186178.76585415215	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	110	1546	75.0	-22	True	NA	NA
PB.4528.6	chr16	+	2196	12	full-splice_match	DDX19A	ENST00000302243.11	2997	12	67	734	0	320	multi-exon	FALSE	canonical	1	2977	junction_8	186178.76585415215	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	97	1533	30.0	-9	True	NA	NA
PB.4528.7	chr16	+	2672	9	incomplete-splice_match	DDX19A	ENST00000302243.11	2997	12	9281	7	215	0	5prime_fragment	FALSE	canonical	1	2977	junction_5	192994.1795362217	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	170	1282	35.0	-1294	False	AATATA	-11
PB.4528.1	chr16	+	1767	12	full-splice_match	DDX19A	ENST00000302243.11	2997	12	35	1195	3	99	multi-exon	TRUE	canonical	1	2977	junction_8	186178.76585415215	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	129	1565	20.0	-41	True	AATAGA	-20
PB.4528.2	chr16	+	2830	12	full-splice_match	DDX19A	ENST00000302243.11	2997	12	43	124	1	-117	multi-exon	FALSE	canonical	1	2977	junction_8	186178.76585415215	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	121	1557	25.0	-33	True	GATAAA	-4
PB.4528.3	chr16	+	2815	12	full-splice_match	DDX19A	ENST00000302243.11	2997	12	175	7	60	0	multi-exon	FALSE	canonical	1	2977	junction_8	186178.76585415215	NA	4	NA	TRUE	NA	NA	NA	C	coding	459	1380	46	1425	35.0	76	False	AATATA	-11
PB.7577.1	chr21	+	2228	13	incomplete-splice_match	PCNT	ENST00000359568.9	10560	47	-37	88648	-37	3795	3prime_fragment	FALSE	canonical	1	70918	junction_1	35154.84649958981	NA	1	NA	TRUE	NA	NA	NA	B	coding	694	2082	145	2226	70.0	-74	True	AAGAAA	-11
PB.8561.3	chr3	-	1990	8	novel_in_catalog	ALG3	novel	1452	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	83021	junction_7	248802.7168063984	NA	3	NA	TRUE	NA	NA	NA	B	coding	304	915	94	1008	30.0	-4	True	AATAAA	-14
PB.7577.2	chr21	+	2347	14	incomplete-splice_match	PCNT	ENST00000359568.9	10560	47	-17	82221	-17	10222	3prime_fragment	FALSE	canonical	1	70918	junction_1	35195.63314813678	NA	1	NA	TRUE	NA	NA	NA	B	coding	741	2223	125	2347	60.0	-54	True	ACTAAA	-29
PB.8024.1	chr3	+	3072	6	full-splice_match	EXOG	ENST00000287675.9	2792	6	71	-351	0	351	multi-exon	FALSE	canonical	1	41461	junction_2	27888.628022188543	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	26	1132	15.0	-14	True	GATAAA	-16
PB.92.7	chr1	+	1742	5	full-splice_match	FBXO44	ENST00000376762.8	1734	5	-10	2	-1	0	multi-exon	FALSE	canonical	1	175976	junction_1	114601.59331434926	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	84	758	10.0	23	True	NA	NA
PB.3331.5	chr14	+	3018	2	full-splice_match	THTPA	ENST00000288014.6	2860	2	349	-507	77	507	multi-exon	FALSE	canonical	1	144523	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	388	1080	100.0	0	True	NA	NA
PB.1137.2	chr1	-	3347	4	full-splice_match	DUSP10	ENST00000366899.3	2676	4	87	-758	0	758	multi-exon	FALSE	canonical	1	177829	junction_1	26646.787252666854	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	153	1601	20.0	-1	True	AATAAA	-18
PB.9429.2	chr5	-	3543	3	novel_not_in_catalog	HINT1	novel	1081	3	NA	NA	4	-5	intron_retention	FALSE	canonical	1	6008	junction_1	3126954.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	91	276	117	392	15.0	-66	True	AATAAA	-18
PB.9429.1	chr5	-	3513	3	full-splice_match	HINT1	ENST00000508488.1	703	3	8	-2818	8	-5	multi-exon	FALSE	canonical	1	126325	junction_1	3066795.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	113	424	15.0	-62	True	AATAAA	-18
PB.8752.4	chr4	-	6174	17	full-splice_match	APBB2	ENST00000506352.5	3316	17	-23	-2835	-20	1825	multi-exon	FALSE	canonical	1	53240	junction_10	63200.245679871325	NA	6	NA	TRUE	NA	NA	NA	C	coding	737	2214	651	2864	25.0	1	True	ATTAAA	-17
PB.8420.1	chr3	+	2092	2	full-splice_match	SLC35G2	ENST00000446465.2	2060	2	-38	6	-38	-2	multi-exon	FALSE	canonical	1	29939	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	412	1239	667	1905	25.0	-13	True	ATTAAA	-15
PB.8420.2	chr3	+	1567	2	full-splice_match	SLC35G2	ENST00000393079.3	1577	2	8	2	8	-2	multi-exon	FALSE	canonical	1	21888	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	142	1380	25.0	-46	True	ATTAAA	-15
PB.11631.21	chr9	-	1799	10	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-75	49364	-33	-444	3prime_fragment	FALSE	canonical	1	143907	junction_4	101966.58891222684	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	249	1709	35.0	12	True	ATTAAA	-36
PB.145.43	chr1	-	2879	5	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-3	-111	combination_of_known_junctions	FALSE	canonical	1	56377	junction_1	478305.2654384933	NA	5	NA	TRUE	NA	NA	NA	C	coding	133	402	222	623	5.0	-9	True	AATAAA	-17
PB.3331.1	chr14	+	1789	3	full-splice_match	THTPA	ENST00000404535.3	1779	3	-7	-3	-7	3	multi-exon	FALSE	canonical	1	45387	junction_1	49568.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	360	1052	15.0	-7	True	AATATA	-20
PB.145.41	chr1	-	2789	5	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-6	-104	combination_of_known_junctions	FALSE	canonical	1	42551	junction_4	518407.20194861054	NA	3	NA	TRUE	NA	NA	NA	C	coding	133	402	125	526	0.0	-21	True	AATAAA	-24
PB.145.40	chr1	-	2450	10	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	0	3112	any annotated donor/acceptor	FALSE	canonical	1	20726	junction_1	443452.10283381044	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	119	1153	15.0	-15	True	NA	NA
PB.12345.1	chrX	+	1254	6	full-splice_match	EMD	ENST00000369842.8	1379	6	123	2	-21	-2	multi-exon	FALSE	canonical	1	1011068	junction_1	149011.22125316603	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	166	930	10.0	25	True	AATAAA	-17
PB.2104.1	chr11	-	1421	7	full-splice_match	PPP1CA	ENST00000376745.8	1476	7	75	-20	15	2	multi-exon	FALSE	canonical	1	2487026	junction_6	342399.1273102277	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	75	1067	15.0	-32	True	AATAAA	-21
PB.2104.2	chr11	-	2840	5	novel_in_catalog	PPP1CA	novel	1389	7	NA	NA	15	1	intron_retention	FALSE	canonical	1	2487026	junction_4	398240.3361359664	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	75	530	15.0	-32	True	AATAAA	-20
PB.12345.2	chrX	+	1480	5	novel_in_catalog	EMD	novel	1379	6	NA	NA	-33	-2	intron_retention	FALSE	canonical	1	1011068	junction_1	136601.91432658437	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	386	1156	10.0	13	True	AATAAA	-17
PB.6264.5	chr19	-	3056	4	full-splice_match	ZNF606	ENST00000547121.5	1196	4	10	-1870	8	2	multi-exon	FALSE	canonical	1	32348	junction_3	16836.45523525926	NA	0	NA	TRUE	NA	NA	NA	C	coding	69	210	466	675	25.0	10	True	AATAAA	-23
PB.8874.12	chr4	-	2359	7	novel_in_catalog	PPM1K	novel	6484	7	NA	NA	9	-21	combination_of_known_junctions	FALSE	canonical	1	11158	junction_6	82185.14153624931	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	538	1656	100.0	500	False	NA	NA
PB.8874.13	chr4	-	1642	7	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	25	-21	any annotated donor/acceptor	FALSE	canonical	1	518	junction_6	114058.94044162723	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	478	939	100.0	-3	True	NA	NA
PB.8874.14	chr4	-	1727	6	full-splice_match	PPM1K	ENST00000508256.5	923	6	-120	-684	-15	-22	multi-exon	FALSE	canonical	1	29093	junction_5	84101.523596187	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	564	1025	100.0	1	True	NA	NA
PB.8874.15	chr4	-	4321	6	novel_in_catalog	PPM1K	novel	6484	7	NA	NA	6	-22	intron_retention	FALSE	canonical	1	105597	junction_5	62073.18302906658	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	227	1285	100.0	180	False	NA	NA
PB.8874.16	chr4	-	3825	5	novel_in_catalog	PPM1K	novel	6484	7	NA	NA	3	-22	intron_retention	FALSE	canonical	1	29093	junction_4	94024.52759087652	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	388	789	100.0	177	False	NA	NA
PB.6264.4	chr19	-	2085	7	full-splice_match	ZNF606	ENST00000341164.8	4248	7	523	1640	1	-428	multi-exon	FALSE	canonical	1	13184	junction_6	19365.23272732175	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1986	99	2084	15.0	-7	True	AATAAA	-20
PB.8874.18	chr4	-	1961	7	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	1	-22	any annotated donor/acceptor	FALSE	canonical	1	2243	junction_6	84932.13898640228	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	141	1259	100.0	492	False	NA	NA
PB.8874.19	chr4	-	1938	6	novel_not_in_catalog	PPM1K	novel	6484	7	NA	NA	26	-22	any annotated donor/acceptor	FALSE	canonical	1	4924	junction_5	111632.48708077769	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	775	1236	100.0	-2	True	NA	NA
PB.3331.2	chr14	+	1879	2	full-splice_match	THTPA	ENST00000288014.6	2860	2	290	691	18	6	multi-exon	FALSE	canonical	1	144523	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	447	1139	10.0	41	True	AATATA	-23
PB.6264.7	chr19	-	2806	4	full-splice_match	ZNF606	ENST00000547121.5	1196	4	13	-1623	11	-245	multi-exon	FALSE	canonical	1	32348	junction_3	16836.45523525926	NA	1	NA	TRUE	NA	NA	NA	C	coding	69	210	463	672	75.0	13	True	NA	NA
PB.11625.77	chr9	-	1957	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835621.6377704098	NA	2	1	TRUE	NA	NA	NA	B	coding	433	1302	216	1517	10.0	-12	True	AATAAA	-13
PB.11858.1	chr9	+	6632	36	full-splice_match	NUP214	ENST00000359428.9	7600	36	1	967	1	0	multi-exon	FALSE	canonical	1	154559	junction_12	67873.58245197691	NA	1	NA	TRUE	NA	NA	NA	C	coding	2090	6273	144	6416	20.0	-514	False	ATTAAA	-17
PB.11858.3	chr9	+	2641	18	incomplete-splice_match	NUP214	ENST00000359428.9	7600	36	25	75202	0	-5081	3prime_fragment	FALSE	canonical	1	154559	junction_12	30710.28371937595	NA	2	NA	TRUE	NA	NA	NA	C	coding	840	2520	120	2639	70.0	0	True	NA	NA
PB.6264.6	chr19	-	4882	2	incomplete-splice_match	ZNF606	ENST00000546715.5	636	3	-15	-2822	-5	-6	intron_retention	FALSE	canonical	1	65746	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	2263	2601	45.0	-13	True	AATAAA	-15
PB.11858.5	chr9	+	6570	36	full-splice_match	NUP214	ENST00000411637.6	7538	36	10	958	10	1	multi-exon	FALSE	canonical	1	40028	junction_12	82452.9275576145	NA	0	NA	TRUE	NA	NA	NA	C	coding	2080	6243	110	6352	20.0	10	True	ATTAAA	-19
PB.11858.4	chr9	+	7563	36	full-splice_match	NUP214	ENST00000359428.9	7600	36	28	9	3	-2	multi-exon	FALSE	canonical	1	154559	junction_12	67873.58245197691	NA	0	NA	TRUE	NA	NA	NA	C	coding	2090	6273	117	6389	35.0	3	True	AATAAA	-17
PB.11858.6	chr9	+	6430	34	novel_in_catalog	NUP214	novel	7600	36	NA	NA	31	0	intron_retention	FALSE	canonical	1	9333	junction_26	82852.00714177954	NA	0	NA	TRUE	NA	NA	NA	C	coding	2041	6126	89	6214	20.0	31	True	ATTAAA	-17
PB.6264.1	chr19	-	4067	7	full-splice_match	ZNF606	ENST00000551380.5	2009	7	17	-2075	7	-26	multi-exon	FALSE	canonical	1	32348	junction_6	13005.49762920794	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	467	2845	35.0	9	True	AATAAA	-22
PB.5512.2	chr18	+	2154	9	full-splice_match	SERPINB2	ENST00000457692.5	2155	9	1	0	1	0	multi-exon	FALSE	canonical	1	3313	junction_2	305637.6381043408	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	333	1580	45.0	1	True	AATAAA	-14
PB.2279.10	chr11	+	2377	14	full-splice_match	DLAT	ENST00000280346.10	4458	14	629	1452	3	77	multi-exon	FALSE	canonical	1	355482	junction_10	60972.68861038275	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	31	1974	70.0	32	True	NA	NA
PB.8247.2	chr3	+	3581	10	full-splice_match	ARL13B	ENST00000394222.7	2453	10	-4	-1124	3	-1	multi-exon	FALSE	canonical	1	54409	junction_2	28129.608837190277	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	280	1566	15.0	-10	True	AATAAA	-15
PB.8247.3	chr3	+	3637	11	novel_not_in_catalog	ARL13B	novel	3906	9	NA	NA	3	-2	intron_retention	FALSE	canonical	1	5513	junction_2	44097.665144993785	NA	9	2	TRUE	NA	NA	NA	C	coding	325	978	646	1623	15.0	-10	True	AATAAA	-14
PB.8247.1	chr3	+	3703	11	full-splice_match	ARL13B	ENST00000335438.7	3659	11	-46	2	2	-2	multi-exon	FALSE	canonical	1	14569	junction_3	41315.70933978987	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	448	1689	15.0	-11	True	AATAAA	-14
PB.6541.3	chr2	-	2591	1	novel_in_catalog	AC007040.2	novel	4170	6	NA	NA	6215	-38404	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	6319	False	NA	NA
PB.1107.20	chr1	-	3498	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	-19	1935	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	3	NA	TRUE	NA	NA	NA	C	coding	370	1113	345	1457	40.0	-13	True	TATAAA	-15
PB.1107.23	chr1	-	3253	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	2	1661	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	3	NA	TRUE	NA	NA	NA	C	coding	370	1113	374	1486	55.0	-8	True	NA	NA
PB.8752.6	chr4	-	3525	16	novel_in_catalog	APBB2	novel	8972	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	43553	junction_13	64784.86655371162	NA	2	NA	TRUE	NA	NA	NA	C	coding	738	2217	529	2745	25.0	0	True	AATAAA	-25
PB.6264.3	chr19	-	3794	7	full-splice_match	ZNF606	ENST00000551380.5	2009	7	20	-1805	10	-296	multi-exon	FALSE	canonical	1	32348	junction_6	13005.49762920794	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	464	2842	35.0	12	True	AATACA	-30
PB.1107.27	chr1	-	1414	8	full-splice_match	LPGAT1	ENST00000366997.8	7782	8	9	6359	9	-23	multi-exon	FALSE	canonical	1	17621	junction_7	88684.87104808986	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	219	1331	65.0	-1	True	NA	NA
PB.406.9	chr1	+	2030	5	full-splice_match	BTF3L4	ENST00000489308.6	794	5	25	-1261	-8	-2	multi-exon	FALSE	canonical	1	3679	junction_4	51562.243039359724	NA	0	NA	TRUE	NA	NA	NA	C	coding	78	237	98	334	25.0	1	True	AATAAA	-44
PB.9255.12	chr5	+	2568	12	full-splice_match	TRAPPC13	ENST00000505553.5	1410	12	13	-1171	-11	-132	multi-exon	FALSE	canonical	1	86942	junction_7	59663.31629670497	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	4	1242	30.0	20	True	ATTAAA	-24
PB.8107.14	chr3	-	4861	27	novel_in_catalog	USP19	novel	3907	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	33303	junction_1	124784.35040285115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1421	4266	313	4578	15.0	-16	True	AATAAA	-19
PB.9255.10	chr5	+	1411	12	full-splice_match	TRAPPC13	ENST00000231526.8	2715	12	-1	1305	-1	0	multi-exon	FALSE	canonical	1	86942	junction_7	58033.84920390416	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	23	1258	25.0	1	True	ATTAAA	-16
PB.6264.2	chr19	-	3702	7	full-splice_match	ZNF606	ENST00000341164.8	4248	7	520	26	-2	-26	multi-exon	FALSE	canonical	1	13184	junction_6	19365.23272732175	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	102	2480	35.0	-10	True	AATAAA	-22
PB.8957.3	chr4	+	1931	7	novel_not_in_catalog	AC093752.1	novel	605	3	NA	NA	10	-12494	any annotated donor/acceptor	FALSE	canonical	1	214	junction_6	45617.40539896294	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-4660	False	AATAAA	-30
PB.8107.10	chr3	-	4343	26	novel_in_catalog	USP19	novel	3907	24	NA	NA	-5	-24	combination_of_known_junctions	FALSE	canonical	1	21561	junction_21	135570.6709560678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1266	3801	205	4005	70.0	-20	True	AATATA	-5
PB.8107.13	chr3	-	4697	27	novel_in_catalog	USP19	novel	3907	24	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	33303	junction_1	129540.10952807004	NA	0	NA	TRUE	NA	NA	NA	C	coding	1406	4221	194	4414	15.0	-9	True	AATAAA	-19
PB.8107.12	chr3	-	4810	27	novel_in_catalog	USP19	novel	3907	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	33303	junction_1	136562.10037280025	NA	1	NA	TRUE	NA	NA	NA	C	coding	1404	4215	313	4527	15.0	-16	True	AATAAA	-19
PB.4130.1	chr16	+	3638	11	incomplete-splice_match	CAPN15	ENST00000219611.6	4744	14	19723	3	-4718	-3	5prime_fragment	FALSE	canonical	1	245664	junction_2	72000.74433288867	NA	0	NA	TRUE	NA	NA	NA	A	coding	630	1893	629	2521	15.0	8618	False	AATAAA	-15
PB.455.2	chr1	+	1982	5	novel_in_catalog	AK4	novel	834	6	NA	NA	-25	599	no_combination_of_known_junctions	FALSE	canonical	1	102	junction_4	12803.859847717797	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	154	669	25.0	-1522	False	AATAAA	-10
PB.11826.2	chr9	-	2220	8	novel_in_catalog	WDR34	novel	1755	9	NA	NA	-38	2	intron_retention	FALSE	canonical	1	333987	junction_7	255205.35436557193	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	1470	2135	25.0	-63	True	AAGAAA	-13
PB.11185.30	chr8	-	2957	11	novel_in_catalog	STAU2	novel	2646	12	NA	NA	4	-107	combination_of_known_junctions	FALSE	canonical	1	26951	junction_10	94364.20190776796	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	166	1605	55.0	571	False	AATAAA	-10
PB.9936.1	chr6	-	3251	1	incomplete-splice_match	NUDT3	ENST00000607016.1	9905	5	109744	1	109744	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	5064	False	AATAAA	-19
PB.8105.17	chr3	-	2744	11	full-splice_match	QRICH1	ENST00000357496.6	3083	11	-9	348	0	-68	multi-exon	FALSE	canonical	1	29165	junction_10	242822.3005665048	NA	2	NA	TRUE	NA	NA	NA	C	coding	776	2331	242	2572	30.0	-1	True	TATAAA	-28
PB.8105.16	chr3	-	2666	10	full-splice_match	QRICH1	ENST00000395443.6	3549	10	292	591	0	77	multi-exon	FALSE	canonical	1	202258	junction_9	158566.49555577466	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	182	2512	10.0	-1	True	TATAAA	-10
PB.8105.15	chr3	-	3311	11	full-splice_match	QRICH1	ENST00000424300.5	3009	11	-22	-280	-22	0	multi-exon	FALSE	canonical	1	21831	junction_10	244271.68189065633	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	461	2791	25.0	-26	True	ATTAAA	-15
PB.8105.14	chr3	-	3385	9	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	0	6	intron_retention	FALSE	canonical	1	202258	junction_8	168183.4945139906	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	182	2080	30.0	-1	True	ATTAAA	-22
PB.8105.13	chr3	-	3038	10	full-splice_match	QRICH1	ENST00000395443.6	3549	10	292	219	0	5	multi-exon	FALSE	canonical	1	202258	junction_9	158566.49555577466	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	182	2512	30.0	-1	True	ATTAAA	-21
PB.8105.12	chr3	-	2978	10	novel_not_in_catalog	QRICH1	novel	3549	10	NA	NA	0	-54	any annotated donor/acceptor	FALSE	canonical	1	2742	junction_7	237764.21526273916	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	173	2287	20.0	8	True	TATAAA	-20
PB.8105.11	chr3	-	4385	7	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	2	-53	intron_retention	FALSE	canonical	1	202258	junction_6	168203.26790465624	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	180	1730	20.0	1	True	TATAAA	-21
PB.406.1	chr1	+	3390	6	full-splice_match	BTF3L4	ENST00000313334.12	4703	6	121	1192	-25	1106	multi-exon	FALSE	canonical	1	1261	junction_4	56795.96941826066	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	148	624	50.0	-49	False	ATTAAA	-16
PB.8891.1	chr4	-	2588	9	full-splice_match	ADH5	ENST00000296412.12	2615	9	24	3	9	-3	multi-exon	FALSE	canonical	1	115329	junction_7	271360.2366121232	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	28	1152	20.0	2	True	NA	NA
PB.11826.1	chr9	-	1674	9	full-splice_match	WDR34	ENST00000372715.6	1755	9	87	-6	-1	6	multi-exon	FALSE	canonical	1	333987	junction_8	241218.16238664015	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	326	1585	25.0	-26	True	AAGAAA	-17
PB.406.2	chr1	+	2171	5	full-splice_match	BTF3L4	ENST00000472944.6	2159	5	-12	0	-12	0	multi-exon	FALSE	canonical	1	1261	junction_3	37367.46925803245	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	209	511	25.0	-3	True	NA	NA
PB.8105.19	chr3	-	3407	8	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	0	-39	intron_retention	FALSE	canonical	1	202258	junction_7	163600.05153484544	NA	4	NA	TRUE	NA	NA	NA	C	coding	632	1899	182	2080	5.0	-1	True	CATAAA	-25
PB.8105.18	chr3	-	3061	9	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	-1	-38	intron_retention	FALSE	canonical	1	202258	junction_8	168183.4945139906	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	183	2081	5.0	-2	True	CATAAA	-26
PB.4105.38	chr15	+	3248	11	novel_in_catalog	MEF2A	novel	732	4	NA	NA	-5	397	combination_of_known_junctions	FALSE	canonical	1	4027	junction_1	87219.93754004872	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	380	1840	50.0	-5	True	CATAAA	-13
PB.5979.4	chr19	-	1824	13	novel_not_in_catalog	AC008982.1	novel	963	8	NA	NA	-9762	-19171	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	651451.0294207123	NA	0	NA	TRUE	NA	NA	NA	B	coding	558	1677	68	1744	30.0	-4	True	NA	NA
PB.4105.31	chr15	+	1323	8	incomplete-splice_match	MEF2A	ENST00000557785.5	2854	11	13	23225	3	18995	3prime_fragment	FALSE	canonical	1	114418	junction_1	63593.437000613674	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	370	1203	50.0	1	True	AATAAA	-12
PB.4105.30	chr15	+	5416	11	full-splice_match	MEF2A	ENST00000354410.9	5824	11	292	116	2	-56	multi-exon	FALSE	canonical	1	54893	junction_4	85856.3249285689	NA	95	1	TRUE	NA	NA	NA	C	coding	488	1467	371	1837	15.0	0	True	AAGAAA	-26
PB.4105.33	chr15	+	4447	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	19	-1612	9	-568	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	12	NA	TRUE	NA	NA	NA	C	coding	486	1461	364	1824	45.0	7	True	NA	NA
PB.4105.32	chr15	+	2189	8	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	3	8262	any annotated donor/acceptor	FALSE	canonical	1	2732	junction_7	93719.57827280623	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	370	1116	60.0	1	True	AATAAA	-34
PB.4105.35	chr15	+	5610	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	21	-6	intron_retention	FALSE	canonical	1	4159	junction_2	105352.60242413185	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	521	1981	45.0	19	True	AATAAA	-19
PB.4105.34	chr15	+	2767	10	novel_in_catalog	MEF2A	novel	732	4	NA	NA	-41	55	combination_of_known_junctions	FALSE	canonical	1	30270	junction_1	100740.95029564261	NA	8	2	TRUE	NA	NA	NA	C	coding	488	1467	235	1701	30.0	-1	True	ATTAAA	-10
PB.4105.37	chr15	+	5473	11	novel_in_catalog	MEF2A	novel	732	4	NA	NA	-6	-3	intron_retention	FALSE	canonical	1	4027	junction_1	87219.93754004872	NA	4	NA	TRUE	NA	NA	NA	C	coding	486	1461	381	1841	45.0	-6	True	AATAAA	-22
PB.4105.36	chr15	+	5428	11	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	-40	-6	intron_retention	FALSE	canonical	1	960	junction_9	89973.78847219895	NA	3	NA	TRUE	NA	NA	NA	C	coding	328	987	316	1302	45.0	0	True	AATAAA	-19
PB.9553.14	chr5	-	3976	11	novel_in_catalog	CSNK1A1	novel	6067	10	NA	NA	4	1528	combination_of_known_junctions	FALSE	canonical	1	219238	junction_7	493259.13222914585	NA	25	2	TRUE	NA	NA	NA	C	coding	353	1062	430	1491	75.0	114	False	NA	NA
PB.7037.7	chr2	+	2167	14	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-14	839	combination_of_known_junctions	FALSE	canonical	1	22181	junction_1	284997.94384614873	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1845	321	2165	55.0	-24	True	NA	NA
PB.9553.11	chr5	-	3939	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-43	2171	-43	1528	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	477	1454	75.0	-5	True	NA	NA
PB.9553.10	chr5	-	4039	11	full-splice_match	CSNK1A1	ENST00000515768.5	1098	11	-456	-2485	-23	1528	multi-exon	FALSE	canonical	1	219238	junction_7	505850.07598532585	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	457	1554	75.0	15	True	NA	NA
PB.454.3	chr1	-	4429	26	novel_not_in_catalog	JAK1	novel	5047	25	NA	NA	-42	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	237165.35891029617	NA	2	1	TRUE	NA	NA	NA	C	coding	1154	3465	292	3756	30.0	2	True	AATAAA	-16
PB.454.2	chr1	-	5121	25	full-splice_match	JAK1	ENST00000342505.4	5047	25	-75	1	-75	-1	multi-exon	FALSE	canonical	1	222459	junction_24	186462.63814775558	NA	33	2	TRUE	NA	NA	NA	C	coding	1154	3465	325	3789	30.0	-31	False	AATAAA	-16
PB.9553.19	chr5	-	3744	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-47	2370	-47	1329	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	481	1458	45.0	-9	True	ATTAAA	-15
PB.9553.18	chr5	-	3839	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	61	-1341	61	1341	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	528	1541	45.0	16	False	ATTAAA	-27
PB.454.7	chr1	-	4939	25	novel_not_in_catalog	JAK1	novel	5047	25	NA	NA	-25	-1	any annotated donor/acceptor	TRUE	canonical	1	7047	junction_19	241159.0868399369	NA	0	NA	TRUE	NA	NA	NA	C	coding	1110	3333	275	3607	30.0	19	True	AATAAA	-16
PB.8448.5	chr3	+	2501	24	incomplete-splice_match	U2SURP	ENST00000473835.6	7276	28	52	17351	-19	4989	3prime_fragment	FALSE	canonical	1	338381	junction_23	169844.4552251105	NA	1	1	TRUE	NA	NA	NA	C	coding	821	2463	39	2501	50.0	-11	True	NA	NA
PB.1507.6	chr10	-	4541	19	full-splice_match	WAPL	ENST00000298767.9	6333	19	36	1756	-11	-2	multi-exon	FALSE	canonical	1	149587	junction_18	94650.17044469532	NA	0	NA	TRUE	NA	NA	NA	C	coding	1190	3573	438	4010	10.0	12	True	AATAAA	-19
PB.1507.7	chr10	-	4539	19	novel_not_in_catalog	WAPL	novel	3207	3	NA	NA	20	-2	intron_retention	FALSE	canonical	1	88211	junction_16	119330.21736270426	NA	0	NA	TRUE	NA	NA	NA	C	coding	1184	3555	454	4008	10.0	-4	True	AATAAA	-19
PB.1507.4	chr10	-	1649	1	incomplete-splice_match	WAPL	ENST00000484070.1	3207	3	7127	1	7127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-18
PB.3758.1	chr15	-	6672	23	full-splice_match	GOLGA8B	ENST00000484716.5	6114	23	-5	-553	-5	106	multi-exon	FALSE	canonical	1	1046	junction_16	125883.26214581139	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	2759	4141	50.0	-1	True	AATAAA	-15
PB.3758.7	chr15	-	5593	24	novel_in_catalog	GOLGA8B	novel	4335	16	NA	NA	4	102	combination_of_known_junctions	FALSE	canonical	1	1046	junction_17	123579.90882928061	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	1255	3066	40.0	-13	True	AATAAA	-11
PB.38.7	chr1	+	2509	8	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	1	55364	junction_3	171815.84425096968	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	242	799	5.0	-6	True	NA	NA
PB.3758.5	chr15	-	6752	23	novel_not_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-64	105	intron_retention	FALSE	canonical	1	1046	junction_16	126125.66031106791	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	2843	4222	45.0	4737	False	AATAAA	-14
PB.11160.4	chr8	-	2768	8	novel_in_catalog	ARMC1	novel	3032	7	NA	NA	-11	-382	combination_of_known_junctions	FALSE	canonical	1	3325	junction_7	146661.18543564194	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	388	1215	95.0	-18	False	NA	NA
PB.11160.7	chr8	-	2210	7	full-splice_match	ARMC1	ENST00000276569.7	3032	7	10	812	-7	-809	multi-exon	FALSE	canonical	1	110412	junction_4	101445.24742728627	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	257	1084	55.0	13	False	AATAAA	-43
PB.3758.9	chr15	-	6538	23	novel_in_catalog	GOLGA8B	novel	4335	16	NA	NA	-12	15	intron_retention	FALSE	canonical	1	1046	junction_16	125883.17460960934	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	2791	4173	30.0	-29	True	ATTAAA	-26
PB.11160.1	chr8	-	2958	7	full-splice_match	ARMC1	ENST00000276569.7	3032	7	30	44	0	-41	multi-exon	FALSE	canonical	1	110412	junction_4	101445.24742728627	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	237	1064	65.0	-1	True	AATACA	-5
PB.1507.8	chr10	-	4421	20	full-splice_match	WAPL	ENST00000618527.4	6152	20	-24	1755	23	-2	multi-exon	FALSE	non_canonical	0	0	junction_19	129167.7682165712	NA	0	NA	TRUE	NA	NA	NA	C	coding	1275	3828	63	3890	10.0	-1	True	AATAAA	-19
PB.1507.9	chr10	-	4450	18	novel_in_catalog	WAPL	novel	3207	3	NA	NA	-26	-2	intron_retention	FALSE	canonical	1	35419	junction_13	130743.89923107436	NA	1	NA	TRUE	NA	NA	NA	C	coding	1139	3420	500	3919	10.0	-50	False	AATAAA	-19
PB.10318.1	chr6	+	5341	26	full-splice_match	MAP3K4	ENST00000366919.6	5397	26	55	1	-2	0	multi-exon	FALSE	canonical	1	68962	junction_1	62313.7055079988	NA	0	NA	TRUE	NA	NA	NA	C	coding	1537	4614	214	4827	25.0	13	True	AATAAA	-22
PB.3692.5	chr14	+	4304	21	incomplete-splice_match	INF2	ENST00000392634.8	4672	23	-25	4274	6	1723	intron_retention	FALSE	canonical	1	128019	junction_1	121943.9878658538	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	138	3944	30.0	-6	True	AATAAA	-18
PB.10318.3	chr6	+	5589	27	novel_not_in_catalog	MAP3K4	novel	5397	26	NA	NA	-51	0	any annotated donor/acceptor	FALSE	canonical	1	17	junction_15	76880.7343992194	NA	2	1	TRUE	NA	NA	NA	C	coding	1134	3405	320	3724	25.0	-180	False	AATAAA	-22
PB.10318.5	chr6	+	5516	26	novel_in_catalog	MAP3K4	novel	5397	26	NA	NA	1	-5	intron_retention	FALSE	canonical	1	33069	junction_21	67791.0791775555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1341	4026	226	4251	30.0	1	True	AATAAA	-15
PB.10318.4	chr6	+	5155	25	novel_in_catalog	MAP3K4	novel	5397	26	NA	NA	-11	-5	no_combination_of_known_junctions	FALSE	canonical	1	1113	junction_1	67183.20008306424	NA	0	NA	TRUE	NA	NA	NA	C	coding	1438	4317	332	4648	30.0	-98	False	AATAAA	-15
PB.10318.7	chr6	+	5284	27	novel_not_in_catalog	MAP3K4	novel	5397	26	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71947.60790604762	NA	4	1	TRUE	NA	NA	NA	C	coding	1537	4614	157	4770	25.0	1	True	AATAAA	-22
PB.10318.6	chr6	+	5345	26	novel_not_in_catalog	MAP3K4	novel	5397	26	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	17	junction_15	70427.41686433203	NA	1	1	TRUE	NA	NA	NA	C	coding	1134	3405	226	3630	25.0	1	True	AATAAA	-22
PB.10318.9	chr6	+	5246	27	full-splice_match	MAP3K4	ENST00000392142.8	5490	27	236	8	176	-5	multi-exon	FALSE	canonical	1	52485	junction_16	70192.11299834958	NA	2	NA	TRUE	NA	NA	NA	C	coding	1517	4554	186	4739	30.0	164	False	AATAAA	-15
PB.10318.8	chr6	+	2327	6	incomplete-splice_match	MAP3K4	ENST00000544041.5	5444	28	-74	36360	1	-5496	3prime_fragment	FALSE	canonical	1	68962	junction_1	31093.746316582696	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2100	226	2325	55.0	1	True	NA	NA
PB.8295.8	chr3	-	3258	5	novel_not_in_catalog	BTLA	novel	3213	5	NA	NA	-31	-4	any annotated donor/acceptor	FALSE	canonical	1	2481	junction_3	50519.959404674904	NA	2	1	TRUE	NA	NA	NA	B	coding	295	888	235	1122	30.0	5	True	ATTAAA	-11
PB.2134.5	chr11	+	2064	18	full-splice_match	CTTN	ENST00000301843.12	3272	18	24	1184	-7	239	multi-exon	FALSE	canonical	1	826598	junction_11	259474.64115276543	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	183	1835	20.0	-11	True	AATATA	-21
PB.2134.4	chr11	+	2790	18	incomplete-splice_match	CTTN	ENST00000376561.7	2247	19	-11	5	-7	-1	intron_retention	FALSE	canonical	1	28064	junction_17	416987.2150489139	NA	8	NA	TRUE	NA	NA	NA	C	coding	593	1782	183	1964	10.0	-11	True	AATAAA	-14
PB.2134.7	chr11	+	3174	17	novel_in_catalog	CTTN	novel	3272	17	NA	NA	-5	0	intron_retention	FALSE	canonical	1	6188	junction_16	395786.7734164475	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	181	1761	5.0	-9	True	AATAAA	-15
PB.2134.6	chr11	+	2096	4	full-splice_match	CTTN	ENST00000482755.6	1087	4	-6	-1003	-6	1003	multi-exon	FALSE	canonical	1	877229	junction_2	286392.0479998625	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	1570	1899	20.0	-10	True	ATTAAA	-33
PB.2134.1	chr11	+	3269	18	full-splice_match	CTTN	ENST00000301843.12	3272	18	3	0	3	0	multi-exon	FALSE	canonical	1	826598	junction_11	259474.64115276543	NA	2	NA	TRUE	NA	NA	NA	C	coding	550	1653	204	1856	5.0	-32	False	AATAAA	-15
PB.2134.3	chr11	+	2375	20	novel_in_catalog	CTTN	novel	3272	17	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	13590	junction_19	444755.7715464501	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	189	2204	5.0	-17	True	AATAAA	-19
PB.2134.2	chr11	+	2917	19	novel_in_catalog	CTTN	novel	3272	17	NA	NA	13	0	intron_retention	FALSE	canonical	1	28064	junction_18	373238.97675417847	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	194	2086	5.0	-22	True	AATAAA	-19
PB.3692.1	chr14	+	4666	22	full-splice_match	INF2	ENST00000330634.11	7578	22	-15	2927	-15	3	multi-exon	TRUE	canonical	1	128019	junction_1	134540.96281323401	NA	0	NA	TRUE	NA	NA	NA	C	coding	1240	3723	159	3881	5.0	-27	True	AATAAA	-16
PB.2134.9	chr11	+	2999	5	incomplete-splice_match	CTTN	ENST00000527622.5	597	6	11	-2074	7	2074	intron_retention	FALSE	canonical	1	877229	junction_2	256041.73212291	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	165	593	80.0	7	True	NA	NA
PB.2134.8	chr11	+	3123	17	full-splice_match	CTTN	ENST00000346329.7	3272	17	139	10	2	-1	multi-exon	FALSE	canonical	1	352294	junction_10	317409.99426332826	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	170	1711	10.0	2	True	AATAAA	-14
PB.635.42	chr1	-	3009	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-105	any annotated donor/acceptor	FALSE	canonical	1	14020	junction_17	1554596.8029622892	NA	2	1	TRUE	NA	NA	NA	C	coding	668	2007	251	2257	80.0	-1	True	TTTAAA	-8
PB.381.1	chr1	-	3884	10	full-splice_match	IPP	ENST00000359942.8	1947	10	17	-1954	16	1954	multi-exon	FALSE	canonical	1	7740	junction_1	30149.508683833363	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	88	1836	35.0	15	True	ATTAAA	-16
PB.2611.1	chr12	-	4684	6	novel_in_catalog	CSRNP2	novel	4471	5	NA	NA	0	-7	intron_retention	FALSE	canonical	1	1898	junction_5	79617.89794411807	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	519	2150	40.0	-1	True	ATTAAA	-10
PB.2436.11	chr12	+	2377	12	novel_not_in_catalog	ENO2	novel	547	6	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	638	junction_1	427769.0620824232	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	177	1481	20.0	-6	True	ATTAAA	-15
PB.2436.12	chr12	+	2291	12	full-splice_match	ENO2	ENST00000229277.5	2423	12	131	1	-8	-1	multi-exon	FALSE	canonical	1	436296	junction_1	326501.3479681083	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	92	1396	20.0	-2	True	ATTAAA	-14
PB.2611.2	chr12	-	4620	5	novel_in_catalog	CSRNP2	novel	4471	5	NA	NA	0	-7	intron_retention	FALSE	canonical	1	23581	junction_4	63005.97946772592	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	455	2086	40.0	-1	True	ATTAAA	-10
PB.2611.5	chr12	-	2672	5	full-splice_match	CSRNP2	ENST00000228515.5	4471	5	-46	1845	0	-1845	multi-exon	FALSE	canonical	1	35921	junction_4	57862.07321024282	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	345	1976	5.0	-1	True	NA	NA
PB.2611.7	chr12	-	2062	5	full-splice_match	CSRNP2	ENST00000228515.5	4471	5	-46	2455	0	-2455	multi-exon	FALSE	canonical	1	35921	junction_4	57862.07321024282	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	345	1976	15.0	-1	True	AAAACA	-14
PB.2611.6	chr12	-	2172	5	novel_in_catalog	CSRNP2	novel	4471	5	NA	NA	0	-2455	intron_retention	FALSE	canonical	1	23581	junction_4	63005.97946772592	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	455	2086	15.0	-1	True	AAAACA	-14
PB.8255.7	chr3	-	3699	4	novel_in_catalog	CLDND1	novel	560	4	NA	NA	-2	-24	intron_retention	FALSE	canonical	1	586990	junction_3	321904.91618178185	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	95	580	75.0	0	True	NA	NA
PB.8255.6	chr3	-	4124	4	novel_in_catalog	CLDND1	novel	560	4	NA	NA	-2	-24	intron_retention	FALSE	canonical	1	586990	junction_3	319385.0091935367	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	78	431	75.0	-6	True	NA	NA
PB.1464.8	chr10	-	2903	16	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	48	0	any annotated donor/acceptor	FALSE	canonical	1	86	junction_15	315067.0526214592	NA	2	NA	TRUE	NA	NA	NA	C	coding	534	1605	301	1905	35.0	412	False	NA	NA
PB.1464.9	chr10	-	2832	16	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	75	0	any annotated donor/acceptor	FALSE	canonical	1	118	junction_15	313629.2554039917	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	230	1834	35.0	563	False	NA	NA
PB.8255.3	chr3	-	1983	5	full-splice_match	CLDND1	ENST00000341181.10	2161	5	140	38	-1	-24	multi-exon	FALSE	canonical	1	586990	junction_4	280668.9544431081	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	74	835	75.0	-2	True	NA	NA
PB.2056.18	chr11	+	2927	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	4498	3	1001	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	GATAAA	-32
PB.8255.1	chr3	-	3869	3	full-splice_match	CLDND1	ENST00000513988.1	598	3	-47	-3224	0	-24	multi-exon	FALSE	canonical	1	586990	junction_2	242991.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	93	578	75.0	2	True	NA	NA
PB.3270.1	chr13	-	2391	14	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_10	226335.1291533506	NA	0	NA	TRUE	NA	NA	NA	B	coding	397	1194	611	1804	45.0	-14	True	NA	NA
PB.1464.3	chr10	-	4178	13	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-14	1	intron_retention	FALSE	canonical	1	9320	junction_5	283728.28919638164	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	132	1229	30.0	1	True	NA	NA
PB.3270.3	chr13	-	1681	15	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	18	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	201344.68511090172	NA	1	NA	TRUE	NA	NA	NA	B	coding	399	1200	60	1259	45.0	-44	True	NA	NA
PB.3270.2	chr13	-	1818	14	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_10	180998.30911103357	NA	0	NA	TRUE	NA	NA	NA	B	coding	399	1200	32	1231	45.0	-16	True	NA	NA
PB.3270.5	chr13	-	1928	13	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	231332.94064560515	NA	0	NA	TRUE	NA	NA	NA	B	coding	156	471	26	496	35.0	-10	True	NA	NA
PB.3270.4	chr13	-	1634	15	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	203682.24897088294	NA	0	NA	TRUE	NA	NA	NA	B	coding	399	1200	45	1244	45.0	-29	True	NA	NA
PB.3270.7	chr13	-	3614	7	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	0	2901	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	200849.19266738137	NA	2	NA	TRUE	NA	NA	NA	B	coding	156	471	78	548	75.0	-62	False	NA	NA
PB.3270.6	chr13	-	1682	14	novel_not_in_catalog	PCID2	novel	1937	15	NA	NA	-5	-139	intron_retention	FALSE	non_canonical	0	0	junction_10	180998.30911103357	NA	0	NA	TRUE	NA	NA	NA	B	coding	399	1200	41	1240	40.0	-25	True	ATTAAA	-16
PB.1812.19	chr11	+	2031	11	incomplete-splice_match	SWAP70	ENST00000318950.10	4882	12	30067	2651	-25922	-151	5prime_fragment	FALSE	canonical	1	283291	junction_1	132334.9400868871	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	111	1661	80.0	-7573	False	NA	NA
PB.1812.18	chr11	+	2047	5	novel_not_in_catalog	SWAP70	novel	3538	11	NA	NA	-8	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	131998.45548812303	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	54	563	20.0	-106	False	AATAAA	-11
PB.2056.17	chr11	+	5826	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	1599	3	22	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.1812.11	chr11	+	3837	3	incomplete-splice_match	SWAP70	ENST00000526358.5	813	6	1	21177	1	-18161	3prime_fragment	FALSE	canonical	1	3924	junction_2	160455.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	5	True	AATAAA	-15
PB.1812.10	chr11	+	4654	11	full-splice_match	SWAP70	ENST00000447399.6	3538	11	21	-1137	-4	-33	multi-exon	FALSE	canonical	1	24625	junction_2	182234.17082229664	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	83	1666	45.0	21	True	ATTAAA	-21
PB.1812.13	chr11	+	4813	12	novel_not_in_catalog	SWAP70	novel	3538	11	NA	NA	3	-33	any annotated donor/acceptor	FALSE	canonical	1	911	junction_6	190484.5065605161	NA	17	1	TRUE	NA	NA	NA	C	coding	245	738	1088	1825	45.0	7	True	ATTAAA	-21
PB.1812.12	chr11	+	2003	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	63	2816	5	-316	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	41	1798	75.0	-93	False	NA	NA
PB.1812.15	chr11	+	2028	11	full-splice_match	SWAP70	ENST00000447399.6	3538	11	29	1481	4	-151	multi-exon	FALSE	canonical	1	24625	junction_2	182234.17082229664	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	75	1658	80.0	29	True	NA	NA
PB.1812.14	chr11	+	3023	9	full-splice_match	SWAP70	ENST00000524817.5	3006	9	-32	15	1	-15	multi-exon	FALSE	canonical	1	283291	junction_2	97658.23003976674	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	78	1550	100.0	26	True	NA	NA
PB.1812.17	chr11	+	2152	11	full-splice_match	SWAP70	ENST00000447399.6	3538	11	42	1344	-16	-14	multi-exon	FALSE	canonical	1	24625	junction_2	182234.17082229664	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	62	1645	75.0	42	True	NA	NA
PB.1812.16	chr11	+	3273	10	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	5448	junction_2	196845.9364672137	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	67	1422	25.0	37	True	AATAAA	-19
PB.2056.15	chr11	+	3619	2	full-splice_match	MALAT1	ENST00000508832.2	1519	2	-2803	703	3	-703	multi-exon	FALSE	canonical	1	181685	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	TTTAAA	-26
PB.9431.30	chr5	+	3879	9	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-11	2	intron_retention	FALSE	canonical	1	1192	junction_2	316459.62717874354	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-13	True	AATAAA	-16
PB.2056.12	chr11	+	4240	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	3	-334	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.9431.32	chr5	+	3718	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	17218	-2	intron_retention	FALSE	canonical	1	1096	junction_1	266285.6629211569	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-5092	False	AATAAA	-12
PB.9431.34	chr5	+	3129	4	novel_not_in_catalog	CDC42SE2	novel	3485	5	NA	NA	-26132	-2	intron_retention	FALSE	canonical	1	521495	junction_3	107864.92245499563	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	1255	False	AATAAA	-12
PB.2056.13	chr11	+	3840	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	3	-628	intron_retention	FALSE	canonical	1	9100	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	AATGAA	-42
PB.1416.1	chr10	+	3758	3	full-splice_match	CISD1	ENST00000333926.5	2479	3	123	-1402	3	1402	multi-exon	FALSE	canonical	1	207940	junction_1	325903.5	NA	3	NA	TRUE	NA	NA	NA	A	coding	108	327	94	420	20.0	16	True	AATAGA	-11
PB.9074.4	chr4	+	2469	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	-5	2107	-5	1732	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	173	661	50.0	-29	True	GATAAA	-25
PB.1486.4	chr10	-	2559	2	full-splice_match	ZNF503	ENST00000372524.4	3347	2	125	663	125	-663	multi-exon	FALSE	canonical	1	238132	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	363	2303	85.0	0	True	TATAAA	-32
PB.9074.6	chr4	+	4538	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	24	9	-3	-9	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	24	NA	TRUE	NA	NA	NA	C	coding	162	489	144	632	30.0	0	True	NA	NA
PB.1486.2	chr10	-	3004	2	full-splice_match	ZNF503	ENST00000372524.4	3347	2	124	219	124	-219	multi-exon	FALSE	canonical	1	238132	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	364	2304	85.0	-1	True	NA	NA
PB.2056.10	chr11	+	3874	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	2002	2832	-459	28	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-6398	False	AATAAA	-29
PB.9074.3	chr4	+	1732	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	-13	2852	-13	987	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	181	669	20.0	-37	True	NA	NA
PB.1486.1	chr10	-	2753	3	novel_not_in_catalog	ZNF503	novel	502	4	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	119066.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	498	2090	10.0	-1	True	ATTAAA	-39
PB.2056.11	chr11	+	4342	2	full-splice_match	MALAT1	ENST00000508832.2	1519	2	-2803	-20	3	20	multi-exon	FALSE	canonical	1	181685	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-21
PB.9074.9	chr4	+	1876	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	168	656	20.0	-24	True	NA	NA
PB.9074.8	chr4	+	2853	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	-1	1719	-1	-1719	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	169	657	30.0	-25	True	AGTAAA	-17
PB.8904.10	chr4	-	2417	8	full-splice_match	UBE2D3	ENST00000394803.9	2227	8	96	-286	1	286	multi-exon	FALSE	canonical	1	151175	junction_6	406515.0073236998	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	249	692	35.0	-2	True	AATAAA	-30
PB.11746.1	chr9	+	1100	3	full-splice_match	ATP6V1G1	ENST00000374050.3	1080	3	-11	-9	-11	9	multi-exon	FALSE	canonical	1	2660001	junction_1	379484.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	105	461	5.0	-89	True	AGTAAA	-24
PB.2088.5	chr11	+	2496	17	novel_in_catalog	DPP3	novel	2974	18	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	1	9882	junction_16	146999.1823696968	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	39	2369	0.0	2	True	AATAAA	-20
PB.2088.4	chr11	+	2589	16	novel_in_catalog	DPP3	novel	2974	18	NA	NA	0	-1	intron_retention	FALSE	canonical	1	9882	junction_15	149566.32706304215	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	38	2464	5.0	0	True	AATAAA	-18
PB.2088.1	chr11	+	2572	19	novel_not_in_catalog	DPP3	novel	2974	18	NA	NA	-6	2	any annotated donor/acceptor	TRUE	canonical	1	19974	junction_18	139006.34178428695	NA	1	NA	TRUE	NA	NA	NA	C	coding	737	2214	47	2260	0.0	-9	True	AATAAA	-21
PB.10999.42	chr8	+	6335	39	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-603	-3	any annotated donor/acceptor	FALSE	canonical	1	310	junction_1	231777.1967830576	NA	2	NA	TRUE	NA	NA	NA	C	coding	2024	6075	168	6242	30.0	-4505	False	AATAAA	-23
PB.2088.3	chr11	+	2758	17	novel_in_catalog	DPP3	novel	2974	18	NA	NA	0	2	intron_retention	FALSE	canonical	1	75814	junction_1	123849.88617317892	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	41	2350	0.0	0	True	AATAAA	-21
PB.2088.2	chr11	+	2659	18	full-splice_match	DPP3	ENST00000532677.5	3078	18	421	-2	0	2	multi-exon	FALSE	canonical	1	82971	junction_1	120262.65117477153	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	38	2251	0.0	0	True	AATAAA	-21
PB.8024.3	chr3	+	1891	6	full-splice_match	EXOG	ENST00000287675.9	2792	6	72	829	1	1	multi-exon	FALSE	canonical	1	41461	junction_2	27888.628022188543	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	25	1131	20.0	-13	True	NA	NA
PB.6615.2	chr2	+	1689	9	full-splice_match	RPIA	ENST00000283646.4	1848	9	158	1	158	-1	multi-exon	FALSE	canonical	1	254617	junction_1	71755.96479866674	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	120	833	15.0	-65	False	AATAAA	-20
PB.777.16	chr1	+	4543	27	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	-60	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	396306.11769209296	NA	2	1	TRUE	NA	NA	NA	C	coding	1085	3258	132	3389	75.0	-3	True	NA	NA
PB.8249.1	chr3	-	3025	2	full-splice_match	DHFR2	ENST00000314636.2	3927	2	73	829	-15	3	multi-exon	FALSE	canonical	1	25075	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	307	828	85.0	1	True	GATAAA	-6
PB.8249.2	chr3	-	2974	2	full-splice_match	DHFR2	ENST00000394221.2	4038	2	234	830	-2	0	multi-exon	FALSE	canonical	1	11686	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	259	780	90.0	-74	False	GATAAA	-3
PB.8249.3	chr3	-	2186	1	novel_in_catalog	DHFR2	novel	632	3	NA	NA	1902	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	129	390	837	1226	90.0	1976	False	GATAAA	-3
PB.11533.1	chr9	+	2101	15	incomplete-splice_match	RECK	ENST00000377966.3	4888	21	480	14245	-11	-14245	3prime_fragment	TRUE	canonical	1	83241	junction_13	24096.14166929923	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2013	87	2099	15.0	0	True	AATAAA	-21
PB.6328.9	chr2	-	2437	19	incomplete-splice_match	SMC6	ENST00000448223.6	5233	28	-25	39345	1	0	3prime_fragment	FALSE	canonical	1	29231	junction_17	88570.62952231057	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2142	296	2437	70.0	-24	True	TATAAA	-10
PB.4643.1	chr17	+	1670	4	full-splice_match	TIMM22	ENST00000327158.4	3194	4	1	1523	1	-1523	multi-exon	FALSE	canonical	1	353055	junction_1	96008.01918937119	NA	0	NA	TRUE	NA	NA	NA	A	coding	194	585	26	610	95.0	-11	True	NA	NA
PB.4604.1	chr16	-	1869	6	full-splice_match	RNF166	ENST00000312838.8	1883	6	13	1	-10	-1	multi-exon	FALSE	canonical	1	78126	junction_5	106956.9692491331	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	84	797	15.0	-21	True	AATAAA	-19
PB.11215.4	chr8	-	3405	1	novel_in_catalog	C8orf59	novel	859	4	NA	NA	0	-157	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.4604.2	chr16	-	3403	5	novel_in_catalog	RNF166	novel	1883	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	78126	junction_4	119008.40568080686	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	1948	2334	15.0	-29	True	AATAAA	-16
PB.9337.37	chr5	-	3786	11	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-4	-2	no_combination_of_known_junctions	FALSE	canonical	1	920	junction_9	215716.44116793695	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	622	2013	35.0	-5	True	AATAAA	-29
PB.9337.35	chr5	-	3075	8	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-53	-1	combination_of_known_junctions	FALSE	canonical	1	4426	junction_7	151815.09356732992	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	378	1301	35.0	-94	False	AATAAA	-30
PB.9337.34	chr5	-	3157	8	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	1	4426	junction_7	153853.79855842734	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	364	1383	35.0	-80	False	AATAAA	-30
PB.9337.33	chr5	-	3882	12	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	169	junction_10	218392.7641587722	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	717	2108	35.0	-1	True	AATAAA	-30
PB.4587.8	chr16	-	3165	9	full-splice_match	ZDHHC7	ENST00000564466.5	1488	9	-35	-1642	-2	-111	multi-exon	FALSE	canonical	1	101361	junction_5	199534.7142954939	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	356	1393	30.0	-3	True	AATAAA	-20
PB.9337.31	chr5	-	3485	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	3427	junction_9	169505.5739798751	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	313	1710	30.0	9792	False	AATAAA	-31
PB.9337.30	chr5	-	3266	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-18	1	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_9	166691.35258115022	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	189	1490	30.0	-15	True	AATAAA	-32
PB.4587.5	chr16	-	3208	9	novel_not_in_catalog	ZDHHC7	novel	3442	8	NA	NA	-8	-6	intron_retention	FALSE	canonical	1	15389	junction_5	213641.54784793002	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	329	820	30.0	1	True	AATAAA	-18
PB.4587.4	chr16	-	3061	8	full-splice_match	ZDHHC7	ENST00000313732.8	3442	8	0	381	0	-102	multi-exon	FALSE	canonical	1	149643	junction_7	162282.70345471642	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	354	1280	25.0	-1	True	AATAAA	-29
PB.4587.6	chr16	-	3725	11	novel_not_in_catalog	ZDHHC7	novel	3442	8	NA	NA	2	-7	intron_retention	FALSE	canonical	1	496	junction_6	236286.02874713097	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	339	665	30.0	-9	True	AATAAA	-17
PB.4587.1	chr16	-	3451	9	novel_not_in_catalog	ZDHHC7	novel	3442	8	NA	NA	0	-3	intron_retention	FALSE	canonical	1	39296	junction_6	210580.7944803713	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	354	680	30.0	-1	True	AATAAA	-21
PB.4587.3	chr16	-	3248	9	full-splice_match	ZDHHC7	ENST00000564466.5	1488	9	-10	-1750	10	-3	multi-exon	FALSE	canonical	1	101361	junction_5	199534.7142954939	NA	3	NA	TRUE	NA	NA	NA	C	coding	345	1038	331	1368	30.0	-1	True	AATAAA	-21
PB.4587.2	chr16	-	3392	9	novel_not_in_catalog	ZDHHC7	novel	3442	8	NA	NA	-9	-3	intron_retention	FALSE	canonical	1	15389	junction_5	223567.7836219015	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	330	656	30.0	0	True	AATAAA	-21
PB.4496.2	chr16	-	2175	12	novel_in_catalog	CENPT	novel	2957	10	NA	NA	-5	0	intron_retention	FALSE	canonical	1	23841	junction_10	175582.68309077458	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	1110	2069	25.0	-6	True	AATAAA	-12
PB.4496.3	chr16	-	2064	13	novel_not_in_catalog	CENPT	novel	2957	10	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	173580.8491359086	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	1283	1960	30.0	-24	True	AATAAA	-10
PB.4496.1	chr16	-	2820	11	novel_in_catalog	CENPT	novel	2957	10	NA	NA	1	0	intron_retention	TRUE	canonical	1	294449	junction_10	103064.6826708354	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	1753	2712	20.0	-21	True	AATAAA	-14
PB.4496.6	chr16	-	2178	13	novel_not_in_catalog	CENPT	novel	2957	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	5952	junction_6	212468.73178480417	NA	2	NA	TRUE	NA	NA	NA	C	coding	319	960	1117	2076	40.0	11	True	AATAAA	-8
PB.4496.7	chr16	-	2125	12	full-splice_match	CENPT	ENST00000565157.5	2133	12	2	6	1	0	multi-exon	FALSE	canonical	1	294449	junction_11	108403.64557545834	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	1064	2023	40.0	1	True	AATAAA	-8
PB.4496.4	chr16	-	2979	10	full-splice_match	CENPT	ENST00000569862.5	2957	10	-30	8	0	0	multi-exon	FALSE	canonical	1	294449	junction_9	104544.23307757238	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	1918	2877	40.0	-47	True	AATAAA	-8
PB.4496.5	chr16	-	2706	12	novel_not_in_catalog	CENPT	novel	2957	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	178386.62953940732	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	1927	2604	40.0	-1	True	AATAAA	-8
PB.3551.1	chr14	-	3223	9	full-splice_match	FAM161B	ENST00000286544.3	4078	9	297	558	297	-558	multi-exon	FALSE	canonical	1	25595	junction_8	17703.39840080147	NA	1	NA	TRUE	NA	NA	NA	A	coding	647	1944	92	2035	20.0	279	False	TTTAAA	-16
PB.4496.8	chr16	-	2044	11	novel_in_catalog	CENPT	novel	2957	10	NA	NA	-5	0	intron_retention	FALSE	canonical	1	13148	junction_9	182523.3831882644	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	983	1942	40.0	-6	True	AATAAA	-8
PB.4496.9	chr16	-	1925	13	novel_not_in_catalog	CENPT	novel	2957	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	287	junction_5	173517.27450594716	NA	1	1	TRUE	NA	NA	NA	C	coding	594	1785	39	1823	40.0	-1	True	AATAAA	-8
PB.8230.5	chr3	-	5324	10	novel_in_catalog	SHQ1	novel	2844	11	NA	NA	3	3802	combination_of_known_junctions	FALSE	canonical	1	1265	junction_1	45290.02427265064	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	130	1236	35.0	-30	True	AATAAA	-19
PB.3391.6	chr14	-	1633	9	novel_not_in_catalog	MBIP	novel	1648	9	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	108075.07427471135	NA	3	NA	TRUE	NA	NA	NA	C	coding	236	711	405	1115	15.0	3	True	AATAAA	-17
PB.3391.5	chr14	-	1809	10	novel_in_catalog	MBIP	novel	1648	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	4172	junction_3	140410.00923230968	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	44	949	15.0	-31	True	AATAAA	-17
PB.3391.4	chr14	-	1497	8	full-splice_match	MBIP	ENST00000359527.11	1449	8	-23	-25	-3	0	multi-exon	FALSE	canonical	1	24780	junction_2	107967.8043564424	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	43	891	15.0	-30	True	AATAAA	-17
PB.3391.3	chr14	-	4079	8	novel_in_catalog	MBIP	novel	1648	9	NA	NA	1	-3	intron_retention	FALSE	canonical	1	42956	junction_1	104176.13064068614	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	39	692	15.0	-26	True	AATAAA	-21
PB.8230.6	chr3	-	4367	7	novel_in_catalog	SHQ1	novel	2844	11	NA	NA	-28	-4228	intron_retention	FALSE	canonical	1	62171	junction_2	31197.56897402246	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	104	1021	95.0	-4	True	AGTAAA	-27
PB.3391.1	chr14	-	1540	8	novel_in_catalog	MBIP	novel	1648	9	NA	NA	-8	2	no_combination_of_known_junctions	FALSE	canonical	1	8936	junction_4	124475.0160874028	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	48	1013	25.0	-35	True	AATAAA	-26
PB.12123.3	chrX	-	2355	3	novel_not_in_catalog	PJA1	novel	544	2	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_1	114280.0	NA	1	1	TRUE	NA	NA	NA	C	coding	405	1218	205	1422	25.0	12	False	ATTAAA	-24
PB.12123.2	chrX	-	2734	2	full-splice_match	PJA1	ENST00000361478.1	2755	2	27	-6	27	-2	multi-exon	FALSE	canonical	1	28140	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	688	2283	25.0	26	False	ATTAAA	-24
PB.12123.1	chrX	-	2408	2	full-splice_match	PJA1	ENST00000374571.4	2672	2	300	-36	28	-1	multi-exon	FALSE	canonical	1	228560	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	190	1956	25.0	27	False	ATTAAA	-25
PB.5399.1	chr18	+	2181	7	novel_in_catalog	IMPA2	novel	651	6	NA	NA	0	2	intron_retention	FALSE	canonical	1	299685	junction_1	90275.85398731429	NA	0	NA	TRUE	NA	NA	NA	A	coding	200	603	206	808	5.0	-14	True	AATAAA	-14
PB.8083.6	chr3	-	5888	19	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	1	127722	junction_6	345668.0118337384	NA	3	1	TRUE	NA	NA	NA	C	coding	1137	3414	139	3552	10.0	380	False	AATAAA	-23
PB.12123.5	chrX	-	2063	2	full-splice_match	PJA1	ENST00000477231.1	887	2	-44	-1132	28	-303	multi-exon	FALSE	canonical	1	38433	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	184	1950	25.0	27	False	AATAAA	-21
PB.12123.4	chrX	-	2623	3	novel_not_in_catalog	PJA1	novel	544	2	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_1	14070.0	NA	7	1	TRUE	NA	NA	NA	C	coding	460	1383	309	1691	25.0	-2	True	ATTAAA	-23
PB.8083.7	chr3	-	5729	17	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	180708	junction_4	357215.1134558139	NA	2	NA	TRUE	NA	NA	NA	C	coding	1083	3252	142	3393	10.0	377	False	AATAAA	-23
PB.837.2	chr1	-	1838	4	full-splice_match	ETV3	ENST00000326786.4	1539	4	82	-381	-25	381	multi-exon	FALSE	canonical	1	142576	junction_3	20331.79008897697	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	91	522	80.0	2	True	NA	NA
PB.8083.1	chr3	-	5895	19	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-100	7	combination_of_known_junctions	FALSE	canonical	1	432965	junction_1	311037.53580423835	NA	3	NA	TRUE	NA	NA	NA	C	coding	1151	3456	189	3644	5.0	330	False	AATAAA	-36
PB.11700.42	chr9	+	5235	1	incomplete-splice_match	SLC44A1	ENST00000374723.5	9640	16	147484	6	5418	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-3810	False	AATAAA	-15
PB.4894.16	chr17	+	3347	22	novel_in_catalog	RHOT1	novel	3133	19	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	9618	junction_4	153540.86273701608	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	660	2354	15.0	-38	False	AATAAA	-19
PB.11700.41	chr9	+	1535	2	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-1121	-5588	intron_retention	FALSE	canonical	1	4454	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1	True	AATACA	-11
PB.11522.1	chr9	+	5501	12	full-splice_match	RUSC2	ENST00000361226.7	5199	12	-302	0	-302	0	multi-exon	FALSE	canonical	1	65362	junction_1	90391.22269564244	NA	0	NA	TRUE	NA	NA	NA	A	coding	1516	4551	441	4991	20.0	-24	True	AAAAAG	-14
PB.4894.17	chr17	+	2476	19	incomplete-splice_match	RHOT1	ENST00000358365.7	3297	21	80	15788	9	201	3prime_fragment	FALSE	canonical	1	9618	junction_3	149734.03471748758	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	148	1986	85.0	-31	False	NA	NA
PB.4894.14	chr17	+	3530	18	full-splice_match	RHOT1	ENST00000581094.5	3231	18	-98	-201	-5	201	multi-exon	FALSE	canonical	1	9618	junction_3	150296.62096819328	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	162	1904	85.0	-45	False	NA	NA
PB.11221.6	chr8	+	4842	17	novel_not_in_catalog	CPNE3	novel	4865	17	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154646.57209863843	NA	3	NA	TRUE	NA	NA	NA	C	coding	537	1614	228	1841	25.0	-2	True	GATAAA	-16
PB.11533.2	chr9	+	4412	21	full-splice_match	RECK	ENST00000377966.3	4888	21	481	-5	-10	5	multi-exon	FALSE	canonical	1	75721	junction_18	23303.05166770009	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	86	3001	25.0	1	True	AATAAA	-21
PB.4894.15	chr17	+	3094	22	novel_in_catalog	RHOT1	novel	3133	19	NA	NA	-3	-12	combination_of_known_junctions	FALSE	canonical	1	9618	junction_4	153540.86273701608	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	642	2336	25.0	-20	False	AATAAA	-12
PB.668.1	chr1	-	2393	4	full-splice_match	FAM72C	ENST00000584486.5	2297	4	-21	-75	-21	75	multi-exon	FALSE	canonical	1	2397	junction_1	12045.422957381872	NA	4	NA	TRUE	NA	NA	NA	C	coding	149	450	846	1295	40.0	NA	False	AATAAA	-18
PB.4894.12	chr17	+	2973	19	full-splice_match	RHOT1	ENST00000333942.10	3133	19	39	121	18	-17	multi-exon	FALSE	canonical	1	9618	junction_3	147107.47612578623	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	201	2057	40.0	-9	True	AATAAA	-12
PB.1474.20	chr10	+	2880	13	incomplete-splice_match	SEC24C	ENST00000339365.2	4513	24	21689	-5	-1814	5	5prime_fragment	FALSE	canonical	1	518912	junction_1	162221.48985894426	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	43	1809	20.0	-7112	False	AATAAA	-22
PB.1474.22	chr10	+	2072	7	incomplete-splice_match	SEC24C	ENST00000339365.2	4513	24	24615	2	1112	0	5prime_fragment	FALSE	canonical	1	783160	junction_5	125106.7271564785	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	37	1008	30.0	-4186	False	AATAAA	-15
PB.4894.13	chr17	+	2969	17	novel_in_catalog	RHOT1	novel	3133	19	NA	NA	-26	-2	no_combination_of_known_junctions	FALSE	canonical	1	205	junction_1	131639.5059921579	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	379	1977	15.0	9	True	AATAAA	-18
PB.11184.2	chr8	-	1968	5	incomplete-splice_match	RPL7	ENST00000396467.5	1526	6	1	360	1	-5	intron_retention	FALSE	canonical	1	3198	junction_1	10011.939606664635	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	942	1568	30.0	-1	True	AATAAA	-21
PB.11280.15	chr8	-	3467	9	full-splice_match	RRM2B	ENST00000251810.7	4931	9	71	1393	71	-270	multi-exon	FALSE	canonical	1	165153	junction_8	46010.58837648134	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	174	1229	45.0	9	True	AATAAA	-19
PB.10689.1	chr7	-	2530	2	full-splice_match	DLX5	ENST00000486603.2	1074	2	119	-1575	0	-7	multi-exon	FALSE	canonical	1	29851	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	136	411	1787	2197	35.0	-1	True	AATAAA	-13
PB.82.3	chr1	+	4705	27	full-splice_match	UBE4B	ENST00000253251.12	4772	27	302	-235	-140	235	multi-exon	FALSE	canonical	1	184369	junction_13	85941.29410924412	NA	2	NA	TRUE	NA	NA	NA	C	coding	1173	3522	538	4059	25.0	-27	True	AATAAA	-20
PB.4894.11	chr17	+	3002	21	full-splice_match	RHOT1	ENST00000583994.5	3289	21	16	271	16	-47	multi-exon	FALSE	canonical	1	9618	junction_4	153492.0916433808	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	708	2279	35.0	-11	True	AATAAA	-18
PB.6033.1	chr19	+	3392	2	incomplete-splice_match	MEGF8	ENST00000334370.8	10966	41	45737	8	718	-2	5prime_fragment	FALSE	canonical	1	103678	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	157	474	933	1406	30.0	NA	False	AATAAA	-11
PB.82.2	chr1	+	5312	27	full-splice_match	UBE4B	ENST00000253251.12	4772	27	327	-867	-115	-5	multi-exon	FALSE	canonical	1	184369	junction_13	85941.29410924412	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	513	4034	25.0	-2	True	AATAAA	-19
PB.3385.1	chr14	+	3208	8	novel_in_catalog	KIAA0391	novel	603	2	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	1	5233	junction_1	138783.07042257843	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	962	2713	35.0	-4	True	AATAAA	-14
PB.3385.2	chr14	+	2771	8	novel_in_catalog	KIAA0391	novel	603	2	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	29765	junction_1	132128.55121943532	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	518	2269	25.0	-7	True	AATAAA	-21
PB.3385.3	chr14	+	2588	7	full-splice_match	KIAA0391	ENST00000250377.11	6118	7	-17	3547	0	2	multi-exon	FALSE	canonical	1	29746	junction_2	135435.7814752274	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	384	2087	25.0	-5	True	AATAAA	-20
PB.3385.4	chr14	+	2623	8	full-splice_match	KIAA0391	ENST00000534898.8	2611	8	-16	4	0	-4	multi-exon	FALSE	canonical	1	161630	junction_2	91224.46785142411	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	377	2128	35.0	2	True	AATAAA	-14
PB.3385.5	chr14	+	2259	8	full-splice_match	KIAA0391	ENST00000534898.8	2611	8	-23	375	0	0	multi-exon	FALSE	canonical	1	161630	junction_2	91224.46785142411	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	384	2135	30.0	-5	True	GATAAA	-18
PB.2837.9	chr12	+	2762	7	full-splice_match	DRAM1	ENST00000258534.12	3519	7	225	532	-107	-532	multi-exon	FALSE	canonical	1	167715	junction_1	44433.29891721598	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	215	931	80.0	-4	True	NA	NA
PB.2837.8	chr12	+	2949	5	novel_in_catalog	DRAM1	novel	3519	7	NA	NA	-1	-2	no_combination_of_known_junctions	FALSE	canonical	1	48030	junction_3	97184.38054125519	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	109	588	15.0	-9	True	AATAAA	-23
PB.2837.7	chr12	+	3325	7	full-splice_match	DRAM1	ENST00000258534.12	3519	7	83	111	83	-111	multi-exon	FALSE	canonical	1	167715	junction_1	44433.29891721598	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	357	1073	55.0	-6	True	NA	NA
PB.2837.6	chr12	+	1391	7	full-splice_match	DRAM1	ENST00000258534.12	3519	7	67	2061	67	-5	multi-exon	FALSE	canonical	1	167715	junction_1	44433.29891721598	NA	5	NA	TRUE	NA	NA	NA	C	coding	238	717	373	1089	15.0	-5440	False	NA	NA
PB.2837.5	chr12	+	3658	8	novel_not_in_catalog	DRAM1	novel	3519	7	NA	NA	-25	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	124466.23018755746	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	791	1297	15.0	11	True	AATAAA	-23
PB.2837.4	chr12	+	3168	6	novel_in_catalog	DRAM1	novel	3519	7	NA	NA	-77	-3	no_combination_of_known_junctions	FALSE	canonical	1	17597	junction_5	96590.94540462889	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	185	808	15.0	-5252	False	AATAAA	-22
PB.2837.3	chr12	+	1690	7	full-splice_match	DRAM1	ENST00000258534.12	3519	7	-28	1857	-28	-48	multi-exon	FALSE	canonical	1	167715	junction_1	44433.29891721598	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	468	1184	40.0	8	True	TATAAA	-34
PB.2837.2	chr12	+	2501	7	full-splice_match	DRAM1	ENST00000258534.12	3519	7	329	689	-3	-689	multi-exon	FALSE	canonical	1	167715	junction_1	44433.29891721598	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	111	827	70.0	-11	True	NA	NA
PB.2837.1	chr12	+	3170	7	full-splice_match	DRAM1	ENST00000258534.12	3519	7	347	2	7	-2	multi-exon	FALSE	canonical	1	167715	junction_1	44433.29891721598	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	93	809	15.0	7	True	AATAAA	-23
PB.11868.11	chr9	-	2182	19	incomplete-splice_match	DDX31	ENST00000438527.7	2814	20	44	17562	44	-17562	3prime_fragment	FALSE	canonical	1	103930	junction_3	29072.135153701074	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	266	2047	35.0	-1	True	AATAAA	-18
PB.7047.19	chr2	+	5337	8	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	9	-1347	intron_retention	FALSE	canonical	1	9827	junction_1	73521.1111891666	NA	47	NA	TRUE	NA	NA	NA	C	coding	315	948	2058	3005	20.0	37	True	AATAAA	-29
PB.7047.18	chr2	+	2376	8	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	7	625	no_combination_of_known_junctions	FALSE	canonical	1	361	junction_1	84275.37577053755	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	425	1372	35.0	35	True	AATAAA	-12
PB.7329.8	chr20	-	3624	21	novel_not_in_catalog	ELMO2	novel	3669	22	NA	NA	-44	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	103081.61407734164	NA	28	4	TRUE	NA	NA	NA	C	coding	720	2163	155	2317	25.0	-85	False	AATAAA	-16
PB.5385.1	chr18	+	3908	5	incomplete-splice_match	ANKRD12	ENST00000400020.7	9115	12	120617	2	41400	-2	5prime_fragment	FALSE	canonical	1	140835	junction_2	19903.363841006878	NA	0	NA	TRUE	NA	NA	NA	B	coding	408	1227	51	1277	60.0	2301	False	AATAAA	-16
PB.7329.6	chr20	-	3736	22	full-splice_match	ELMO2	ENST00000372176.5	3678	22	-61	3	-3	1	multi-exon	FALSE	non_canonical	0	0	junction_18	111257.29822102538	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	531	2429	25.0	-29	True	AATAAA	-16
PB.7047.14	chr2	+	3819	7	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	-12	633	no_combination_of_known_junctions	FALSE	canonical	1	13356	junction_1	68350.11087693193	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	1860	2807	25.0	16	True	AATAAA	-20
PB.7047.17	chr2	+	4145	7	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	5	976	no_combination_of_known_junctions	FALSE	canonical	1	13356	junction_1	68350.11087693193	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	1843	2790	60.0	33	True	AAGAAA	-36
PB.7329.5	chr20	-	3662	22	full-splice_match	ELMO2	ENST00000290246.10	3669	22	3	4	1	1	multi-exon	FALSE	canonical	1	120135	junction_20	92956.56498762914	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	193	2355	25.0	-23	True	AATAAA	-16
PB.7329.2	chr20	-	3523	20	novel_in_catalog	ELMO2	novel	3669	22	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	27552	junction_17	115244.17847266444	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	310	2208	15.0	-24	True	AATAAA	-24
PB.7329.3	chr20	-	3558	21	novel_not_in_catalog	ELMO2	novel	3669	22	NA	NA	-2	3	any annotated donor/acceptor	FALSE	canonical	1	2435	junction_13	130325.43998886019	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	841	2244	15.0	-43	True	AATAAA	-23
PB.7047.13	chr2	+	4853	7	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	1422	junction_1	72461.1679307537	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	227	1174	60.0	10	True	NA	NA
PB.7329.1	chr20	-	3631	22	novel_in_catalog	ELMO2	novel	3669	22	NA	NA	0	4	combination_of_known_junctions	TRUE	canonical	1	51422	junction_20	99794.8240273893	NA	1	NA	TRUE	NA	NA	NA	C	coding	720	2163	154	2316	15.0	-13	True	AATAAA	-24
PB.6840.15	chr2	+	2404	8	novel_not_in_catalog	PDK1	novel	842	5	NA	NA	-5	-2485	any annotated donor/acceptor	FALSE	canonical	1	2482	junction_2	124501.23760191369	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	635	1060	100.0	7	True	NA	NA
PB.6840.14	chr2	+	3124	12	novel_not_in_catalog	PDK1	novel	842	5	NA	NA	-12	-312	any annotated donor/acceptor	FALSE	canonical	1	628	junction_11	83884.82215671953	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	62	1372	40.0	0	True	AATAAA	-21
PB.6840.16	chr2	+	2509	11	novel_in_catalog	PDK1	novel	842	5	NA	NA	40	-313	combination_of_known_junctions	FALSE	canonical	1	30822	junction_6	96105.33287726546	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	10	858	40.0	52	True	AATAAA	-20
PB.6840.11	chr2	+	2610	12	full-splice_match	PDK1	ENST00000410055.5	2990	12	39	341	-12	-341	multi-exon	FALSE	canonical	1	39954	junction_11	74741.95715441713	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	62	1372	50.0	0	True	AATAAA	-28
PB.4894.18	chr17	+	3145	21	full-splice_match	RHOT1	ENST00000358365.7	3297	21	81	71	10	-10	multi-exon	FALSE	canonical	1	9618	junction_3	151875.98166138714	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	147	2222	30.0	-30	False	AATAAA	-19
PB.6840.13	chr2	+	4236	11	novel_not_in_catalog	PDK1	novel	842	5	NA	NA	-5	-312	intron_retention	FALSE	canonical	1	5714	junction_10	85102.46579535754	NA	4	NA	TRUE	NA	NA	NA	C	coding	441	1326	55	1380	40.0	7	True	AATAAA	-21
PB.6840.12	chr2	+	4445	12	novel_not_in_catalog	PDK1	novel	842	5	NA	NA	28	-313	intron_retention	FALSE	canonical	1	5642	junction_8	102272.01123813991	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	22	1026	40.0	40	True	AATAAA	-20
PB.1563.1	chr10	+	1904	1	antisense	novelGene_TM9SF3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.8994.2	chr4	-	2065	1	full-splice_match	AC097376.2	ENST00000610159.1	5334	1	36	3233	36	-3233	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	4	True	ATTAAA	-14
PB.6305.4	chr2	-	3972	19	full-splice_match	ADAM17	ENST00000310823.8	4391	19	0	419	0	-268	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	4	NA	TRUE	NA	NA	NA	C	coding	824	2475	226	2700	40.0	-1	True	ATTAAA	-16
PB.2451.3	chr12	-	1759	5	full-splice_match	AICDA	ENST00000229335.10	2819	5	64	996	-6	524	multi-exon	FALSE	canonical	1	44303	junction_2	18525.759977663536	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	41	637	100.0	-2	True	NA	NA
PB.2451.2	chr12	-	2103	4	full-splice_match	AICDA	ENST00000545576.1	923	4	-58	-1122	8	524	multi-exon	FALSE	canonical	1	77153	junction_3	6286.90978674473	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	93	656	100.0	-1	True	NA	NA
PB.2451.1	chr12	-	2129	5	full-splice_match	AICDA	ENST00000229335.10	2819	5	10	680	6	-680	multi-exon	FALSE	canonical	1	44303	junction_2	18525.759977663536	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	95	691	90.0	-3	True	NA	NA
PB.3157.8	chr13	-	2983	1	novel_in_catalog	MED4	novel	931	7	NA	NA	-3	-14954	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-4	True	NA	NA
PB.2451.6	chr12	-	2285	2	novel_not_in_catalog	AICDA	novel	2819	5	NA	NA	0	-5763	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-9	True	NA	NA
PB.2451.5	chr12	-	1743	4	novel_in_catalog	AICDA	novel	2819	5	NA	NA	-36	524	combination_of_known_junctions	FALSE	canonical	1	2197	junction_1	37577.059041684224	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	141	578	100.0	-49	False	NA	NA
PB.2451.4	chr12	-	1727	5	full-splice_match	AICDA	ENST00000537228.5	667	5	62	-1122	-4	524	multi-exon	FALSE	canonical	1	7856	junction_2	33929.332496933974	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	39	605	100.0	0	True	NA	NA
PB.3157.3	chr13	-	2023	7	full-splice_match	MED4	ENST00000258648.6	2022	7	-1	0	-1	0	multi-exon	FALSE	canonical	1	453801	junction_6	102774.02489834459	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	28	840	15.0	-2	True	AATGAA	-23
PB.3157.2	chr13	-	1928	7	full-splice_match	MED4	ENST00000378586.5	931	7	16	-1013	-11	1	multi-exon	FALSE	canonical	1	122239	junction_6	216240.0287125012	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	70	744	10.0	-12	True	AATGAA	-24
PB.3157.1	chr13	-	2271	7	full-splice_match	MED4	ENST00000258648.6	2022	7	1	-250	1	250	multi-exon	FALSE	canonical	1	453801	junction_6	102774.02489834459	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	26	838	25.0	0	True	NA	NA
PB.3157.7	chr13	-	1513	8	novel_not_in_catalog	MED4	novel	460	3	NA	NA	-1	384	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	306805.2407931169	NA	2	1	TRUE	NA	NA	NA	C	coding	217	654	28	681	15.0	-2	True	AATAAA	-12
PB.3157.6	chr13	-	1303	7	full-splice_match	MED4	ENST00000378586.5	931	7	16	-388	-11	388	multi-exon	FALSE	canonical	1	122239	junction_6	216240.0287125012	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	70	744	15.0	-12	True	AATAAA	-16
PB.3157.5	chr13	-	1400	7	full-splice_match	MED4	ENST00000258648.6	2022	7	-1	623	-1	389	multi-exon	FALSE	canonical	1	453801	junction_6	102774.02489834459	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	28	840	20.0	-2	True	AATAAA	-17
PB.3157.4	chr13	-	1881	7	full-splice_match	MED4	ENST00000258648.6	2022	7	-3	144	-3	-144	multi-exon	FALSE	canonical	1	453801	junction_6	102774.02489834459	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	30	842	30.0	-4	True	AATAAA	-32
PB.1057.4	chr1	+	4782	12	novel_not_in_catalog	MDM4	novel	9782	8	NA	NA	-11	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	88938.73658594511	NA	6	NA	TRUE	NA	NA	NA	C	coding	490	1473	151	1623	15.0	-14	True	ATTAAA	-14
PB.1057.5	chr1	+	4029	11	novel_not_in_catalog	MDM4	novel	9782	8	NA	NA	-10	-2221	any annotated donor/acceptor	FALSE	canonical	1	9778	junction_1	88144.8561108361	NA	3	NA	TRUE	NA	NA	NA	C	coding	490	1473	260	1732	100.0	-13	True	NA	NA
PB.1057.6	chr1	+	3912	11	full-splice_match	MDM4	ENST00000367182.7	10073	11	20	6141	-3	-2221	multi-exon	FALSE	canonical	1	106307	junction_5	65228.17718409737	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	143	1615	100.0	-6	True	NA	NA
PB.6472.1	chr2	+	2164	1	full-splice_match	PRORSD1P	ENST00000563365.1	2154	1	-13	3	-13	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	137	414	1719	2132	20.0	NA	False	AATAAA	-11
PB.6704.1	chr2	+	3167	2	full-splice_match	RABL2A	ENST00000476236.1	1109	2	-1337	-721	5	-4	multi-exon	FALSE	canonical	1	16048	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-23	False	AATAAA	-22
PB.1057.2	chr1	+	3931	11	novel_not_in_catalog	MDM4	novel	9782	8	NA	NA	-10	-2221	any annotated donor/acceptor	FALSE	canonical	1	20281	junction_9	85444.90353795246	NA	3	NA	TRUE	NA	NA	NA	C	coding	485	1458	177	1634	100.0	0	True	NA	NA
PB.1057.3	chr1	+	4198	12	novel_not_in_catalog	MDM4	novel	9782	8	NA	NA	11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	88938.73658594511	NA	5	NA	TRUE	NA	NA	NA	C	coding	490	1473	152	1624	15.0	-15	True	ATTAAA	-17
PB.269.3	chr1	+	3035	8	novel_in_catalog	ZNF362	novel	712	4	NA	NA	-25	2	combination_of_known_junctions	FALSE	canonical	1	35037	junction_1	96590.98630085225	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	137	1360	0.0	-25	True	AATAAA	-19
PB.269.2	chr1	+	2916	9	full-splice_match	ZNF362	ENST00000539719.5	3106	9	-50	240	-22	-240	multi-exon	FALSE	canonical	1	11341	junction_1	109422.97063688227	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	260	1483	65.0	-22	True	NA	NA
PB.269.1	chr1	+	2942	9	novel_not_in_catalog	ZNF362	novel	712	4	NA	NA	-628	-240	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	112139.58569561587	NA	5	NA	TRUE	NA	NA	NA	C	coding	390	1173	337	1509	65.0	-628	False	NA	NA
PB.6573.14	chr2	-	1813	11	novel_not_in_catalog	AUP1	novel	1581	12	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	5188	junction_2	654261.115199589	NA	6	1	TRUE	NA	NA	NA	C	coding	256	771	724	1494	15.0	-1	True	ATTAAA	-17
PB.6573.15	chr2	-	2237	8	novel_in_catalog	AUP1	novel	1581	12	NA	NA	2	-3	intron_retention	FALSE	canonical	1	1153914	junction_7	416122.5172979806	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	1448	2092	15.0	2	True	ATTAAA	-16
PB.11673.5	chr9	+	2568	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	133	2477	91	1195	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	124	2496	15.0	0	True	NA	NA
PB.6573.10	chr2	-	1500	12	full-splice_match	AUP1	ENST00000425118.5	1581	12	72	9	-3	-2	multi-exon	FALSE	canonical	1	228848	junction_2	587953.7012520629	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	60	1181	15.0	9	True	ATTAAA	-17
PB.6573.11	chr2	-	2884	11	full-splice_match	AUP1	ENST00000463900.5	1645	11	-1241	2	-999	-2	multi-exon	FALSE	canonical	1	1153914	junction_10	383185.26447289175	NA	3	NA	TRUE	NA	NA	NA	C	coding	281	846	1893	2738	15.0	17	False	ATTAAA	-17
PB.6573.12	chr2	-	2525	5	novel_in_catalog	AUP1	novel	1581	12	NA	NA	2	-2	intron_retention	FALSE	canonical	1	1153914	junction_4	525020.4907841098	NA	0	NA	TRUE	NA	NA	NA	C	coding	81	246	350	595	15.0	2	True	ATTAAA	-17
PB.6573.13	chr2	-	2343	7	novel_in_catalog	AUP1	novel	1581	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	1153914	junction_6	445492.08270645945	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	59	508	15.0	10	True	ATTAAA	-17
PB.3338.10	chr14	+	1668	7	full-splice_match	PCK2	ENST00000396973.8	1830	7	153	9	1	-9	multi-exon	FALSE	canonical	1	342893	junction_3	87831.79912274875	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	95	1420	50.0	1	True	NA	NA
PB.1106.1	chr1	-	2132	8	full-splice_match	NEK2	ENST00000366999.8	2131	8	-3	2	-3	-2	multi-exon	FALSE	canonical	1	62912	junction_6	26954.229770680005	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	143	1480	15.0	-1	True	AATAAA	-21
PB.11802.4	chr9	-	3701	15	novel_not_in_catalog	FAM129B	novel	3760	14	NA	NA	41	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	479133.30679655424	NA	2	1	TRUE	NA	NA	NA	C	coding	746	2241	162	2402	25.0	32	True	AATAAA	-10
PB.9721.1	chr6	+	2846	17	incomplete-splice_match	DSP	ENST00000418664.2	7812	24	-114	11780	-72	8975	3prime_fragment	FALSE	canonical	1	426893	junction_15	109185.45716806795	NA	0	NA	TRUE	NA	NA	NA	A	coding	811	2433	414	2846	40.0	-1914	False	GATAAA	-25
PB.1677.1	chr10	+	2556	16	full-splice_match	GRK5	ENST00000392870.2	2654	16	101	-3	101	3	multi-exon	FALSE	canonical	1	127484	junction_1	36645.77903272839	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	229	2001	20.0	0	True	ATTAAA	-22
PB.1677.2	chr10	+	2457	15	novel_in_catalog	GRK5	novel	2654	16	NA	NA	101	0	no_combination_of_known_junctions	FALSE	canonical	1	4684	junction_1	58484.77572559776	NA	3	NA	TRUE	NA	NA	NA	C	coding	558	1677	229	1905	20.0	0	True	ATTAAA	-19
PB.1677.3	chr10	+	2345	16	full-splice_match	GRK5	ENST00000392870.2	2654	16	101	208	101	-208	multi-exon	FALSE	canonical	1	127484	junction_1	36645.77903272839	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	229	2001	20.0	0	True	AAGAAA	-16
PB.1677.4	chr10	+	2338	16	novel_not_in_catalog	GRK5	novel	2654	16	NA	NA	63669	-1	any annotated donor/acceptor	TRUE	canonical	1	136	junction_1	57674.397675764434	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	330	1787	25.0	2	True	ATTAAA	-18
PB.1677.5	chr10	+	2580	16	novel_not_in_catalog	GRK5	novel	2654	16	NA	NA	98367	-1	any annotated donor/acceptor	FALSE	canonical	1	4302	junction_1	56828.86990840718	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	572	2029	25.0	-17	True	ATTAAA	-18
PB.3377.1	chr14	-	2882	2	full-splice_match	SPTSSA	ENST00000298130.4	2777	2	68	-173	68	173	multi-exon	FALSE	canonical	1	962167	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-27	False	NA	NA
PB.11313.16	chr8	-	4830	9	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-7	-2493	intron_retention	FALSE	non_canonical	0	0	junction_8	66514.27042830264	NA	2	1	TRUE	NA	NA	NA	B	coding	252	759	787	1545	95.0	-1	True	NA	NA
PB.8904.12	chr4	-	3150	7	full-splice_match	UBE2D3	ENST00000503742.5	1977	7	24	-1197	9	22	multi-exon	FALSE	canonical	1	151175	junction_5	440092.9472750299	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	8	True	AATAAA	-39
PB.11802.1	chr9	-	3902	14	full-splice_match	FAM129B	ENST00000373312.3	3957	14	50	5	38	-5	multi-exon	FALSE	canonical	1	638201	junction_13	335765.0359883007	NA	2	NA	TRUE	NA	NA	NA	C	coding	746	2241	165	2405	25.0	29	True	AATAAA	-9
PB.3184.1	chr13	+	893	11	novel_not_in_catalog	SUGT1	novel	775	10	NA	NA	-31	-7831	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	229228.73712754692	NA	3	1	TRUE	NA	NA	NA	A	coding	260	780	114	893	70.0	-5	True	GATAAA	-16
PB.11673.9	chr9	+	4915	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	135	128	93	-120	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	122	2494	25.0	2	True	AATAAA	-20
PB.7290.5	chr20	+	2539	9	full-splice_match	ACTR5	ENST00000243903.5	2565	9	23	3	23	-3	multi-exon	FALSE	canonical	1	82413	junction_1	38556.3069548939	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	15	1838	25.0	-2	True	AATAAA	-22
PB.7290.4	chr20	+	2200	9	novel_not_in_catalog	ACTR5	novel	2565	9	NA	NA	15	-331	any annotated donor/acceptor	FALSE	canonical	1	34537	junction_6	49302.78564629361	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	23	1387	20.0	-10	True	TTTAAA	-18
PB.7290.3	chr20	+	2220	9	full-splice_match	ACTR5	ENST00000243903.5	2565	9	15	330	15	-330	multi-exon	FALSE	canonical	1	82413	junction_1	38556.3069548939	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	23	1846	20.0	-10	True	TTTAAA	-19
PB.7290.2	chr20	+	2946	8	novel_not_in_catalog	ACTR5	novel	2565	9	NA	NA	11	-330	intron_retention	FALSE	canonical	1	7015	junction_1	58007.73418735661	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	471	1328	20.0	-14	True	TTTAAA	-19
PB.7290.1	chr20	+	5977	9	novel_not_in_catalog	ACTR5	novel	2565	9	NA	NA	6	-331	any annotated donor/acceptor	TRUE	canonical	1	17507	junction_5	53355.68268645337	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	32	1327	20.0	-19	True	TTTAAA	-18
PB.11132.12	chr8	-	2614	10	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	1	-6	any annotated donor/acceptor	FALSE	canonical	1	6117	junction_8	87262.01365364478	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	435	923	15.0	-48	True	AATAAA	-17
PB.11132.13	chr8	-	2649	10	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	2	-11	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	87073.11984139297	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	235	963	15.0	-47	True	AATAAA	-12
PB.11132.11	chr8	-	2499	9	full-splice_match	LYPLA1	ENST00000618741.1	2526	9	21	6	2	-6	multi-exon	FALSE	canonical	1	25486	junction_4	73121.66235459913	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	320	808	15.0	395	False	AATAAA	-17
PB.11132.16	chr8	-	2327	7	novel_in_catalog	LYPLA1	novel	2585	9	NA	NA	-32	-11	no_combination_of_known_junctions	FALSE	canonical	1	472	junction_4	71410.18042890585	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	150	641	15.0	38	True	AATAAA	-12
PB.7337.2	chr20	-	3508	21	novel_in_catalog	SULF2	novel	4915	21	NA	NA	36	-10	combination_of_known_junctions	FALSE	canonical	1	104815	junction_20	143260.81212843937	NA	2	NA	TRUE	NA	NA	NA	B	coding	870	2613	212	2824	45.0	27	True	AATAAA	-17
PB.7337.1	chr20	-	3614	21	novel_not_in_catalog	SULF2	novel	4915	21	NA	NA	-7096	-9	any annotated donor/acceptor	FALSE	canonical	1	3042	junction_20	157927.80115871778	NA	0	NA	TRUE	NA	NA	NA	B	coding	870	2613	317	2929	45.0	0	True	AATAAA	-18
PB.11132.15	chr8	-	2429	10	novel_not_in_catalog	LYPLA1	novel	2585	9	NA	NA	-31	-11	any annotated donor/acceptor	FALSE	canonical	1	964	junction_9	81200.9296361672	NA	8	1	TRUE	NA	NA	NA	C	coding	181	546	198	743	15.0	39	True	AATAAA	-12
PB.2800.9	chr12	-	1904	1	novel_in_catalog	BTG1	novel	4680	2	NA	NA	49	173	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	134	405	314	718	80.0	-3	True	TTTAAA	-42
PB.11132.18	chr8	-	2406	8	novel_in_catalog	LYPLA1	novel	2585	9	NA	NA	5	-13	combination_of_known_junctions	FALSE	canonical	1	65	junction_2	90054.41985934995	NA	11	1	TRUE	NA	NA	NA	C	coding	128	387	336	722	15.0	379	False	AATAAA	-10
PB.11132.19	chr8	-	1395	9	full-splice_match	LYPLA1	ENST00000316963.7	2585	9	142	1048	-17	-8	multi-exon	FALSE	canonical	1	25486	junction_4	63742.584417228485	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	68	745	65.0	53	True	NA	NA
PB.6799.29	chr2	+	5912	10	full-splice_match	MARCH7	ENST00000259050.8	5922	10	9	1	1	-1	multi-exon	FALSE	canonical	1	144099	junction_1	174545.66581234994	NA	2	NA	TRUE	NA	NA	NA	C	coding	704	2115	114	2228	30.0	2	True	AATAAA	-26
PB.6799.28	chr2	+	6122	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	1	-11	intron_retention	FALSE	canonical	1	145544	junction_1	184669.91896540025	NA	5	NA	TRUE	NA	NA	NA	C	coding	745	2238	169	2406	25.0	2	True	AATAAA	-15
PB.6799.27	chr2	+	1711	5	incomplete-splice_match	MARCH7	ENST00000259050.8	5922	10	8	22140	0	761	3prime_fragment	FALSE	canonical	1	144099	junction_1	222686.58129574737	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1596	115	1710	65.0	1	True	GATAAA	-38
PB.6799.26	chr2	+	2344	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	174130.8624659506	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	170	2284	30.0	1	True	ATTAAA	-13
PB.6799.25	chr2	+	7699	8	incomplete-splice_match	MARCH7	ENST00000259050.8	5922	10	8	2456	0	-12	intron_retention	FALSE	canonical	1	144099	junction_1	196683.47570725332	NA	13	NA	TRUE	NA	NA	NA	C	coding	707	2124	115	2238	25.0	1	True	AATAAA	-14
PB.6799.24	chr2	+	7758	8	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-8	intron_retention	FALSE	canonical	1	145544	junction_1	196217.25829138415	NA	3	NA	TRUE	NA	NA	NA	C	coding	707	2124	170	2293	20.0	1	True	AATAAA	-18
PB.6799.23	chr2	+	3221	8	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-3331	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	196217.25829138415	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	170	2293	35.0	1	True	AATAAA	-15
PB.6799.22	chr2	+	3472	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	36340	junction_8	258935.78336888738	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	170	2245	15.0	1	True	AATAAA	-22
PB.6799.21	chr2	+	3519	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	174130.8624659506	NA	2	NA	TRUE	NA	NA	NA	C	coding	704	2115	170	2284	20.0	1	True	AATAAA	-20
PB.6799.20	chr2	+	3588	12	full-splice_match	MARCH7	ENST00000409175.5	2402	12	18	-1204	0	-10	multi-exon	FALSE	canonical	1	13707	junction_1	290455.63124275644	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	243	2357	20.0	1	True	AATAAA	-16
PB.780.28	chr1	-	6952	16	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	-5	3	intron_retention	FALSE	canonical	1	4252	junction_15	445751.5698884102	NA	3	NA	TRUE	NA	NA	NA	C	coding	931	2796	1444	4239	85.0	-6	True	AATATA	-11
PB.590.1	chr1	-	1714	8	novel_in_catalog	PSRC1	novel	1584	8	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_7	120740.98186817016	NA	2	1	TRUE	NA	NA	NA	A	coding	333	1002	117	1118	25.0	-7	True	AATAAA	-26
PB.780.25	chr1	-	4877	14	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-26	3	no_combination_of_known_junctions	FALSE	canonical	1	292	junction_13	363262.71833781333	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	170	2164	85.0	29	False	AATATA	-11
PB.8408.20	chr3	-	3881	21	incomplete-splice_match	TOPBP1	ENST00000642236.1	6152	28	396	17861	-91	1	3prime_fragment	FALSE	canonical	1	77129	junction_14	92367.7041287159	NA	0	NA	TRUE	NA	NA	NA	C	coding	1210	3633	224	3856	20.0	-64	True	AATAAA	-19
PB.8408.21	chr3	-	4462	20	incomplete-splice_match	TOPBP1	ENST00000260810.9	5378	28	-36	18659	-36	-1099	3prime_fragment	FALSE	canonical	1	109338	junction_19	84362.1219612904	NA	1	NA	TRUE	NA	NA	NA	C	coding	1135	3408	169	3576	40.0	-9	True	AATAAA	-12
PB.375.1	chr1	-	2156	6	full-splice_match	CCDC163	ENST00000626177.2	2229	6	6	67	6	4	multi-exon	FALSE	canonical	1	19727	junction_4	7765.210559926884	NA	0	NA	TRUE	NA	NA	NA	A	coding	118	357	465	821	25.0	-1	True	NA	NA
PB.8360.2	chr3	-	6027	13	incomplete-splice_match	HEG1	ENST00000650592.1	6164	14	4406	-20	4406	0	5prime_fragment	TRUE	canonical	1	139607	junction_11	30975.734223541822	NA	2	NA	TRUE	NA	NA	NA	B	coding	898	2697	156	2852	95.0	-1025	False	NA	NA
PB.8435.28	chr3	+	6514	3	full-splice_match	ZBTB38	ENST00000510338.5	644	3	8	-5878	8	517	multi-exon	FALSE	canonical	1	92943	junction_1	54202.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	199	3786	25.0	1	True	ATTAAA	-19
PB.8435.29	chr3	+	6730	3	full-splice_match	ZBTB38	ENST00000510338.5	644	3	-4	-6082	-4	721	multi-exon	FALSE	canonical	1	92943	junction_1	54202.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	211	3798	20.0	-11	True	AATAAA	-20
PB.12344.52	chrX	-	7434	42	novel_not_in_catalog	FLNA	novel	8225	47	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	1462509.6217938734	NA	5	1	TRUE	NA	NA	NA	C	coding	2352	7059	58	7116	5.0	-5	True	AATAAA	-16
PB.12344.50	chrX	-	5109	21	novel_in_catalog	FLNA	novel	8225	47	NA	NA	-400	-1	intron_retention	FALSE	canonical	1	2499413	junction_16	1374369.7374038717	NA	2	NA	TRUE	NA	NA	NA	C	coding	671	2016	1035	3050	5.0	9835	False	AATAAA	-16
PB.8435.22	chr3	+	6559	4	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	63	514	intron_retention	FALSE	canonical	1	1244	junction_1	81809.95621696801	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	247	3834	30.0	-3485	False	ATTAAA	-16
PB.8435.23	chr3	+	6658	3	full-splice_match	ZBTB38	ENST00000509883.5	2659	3	1	-4000	1	514	multi-exon	FALSE	canonical	1	10580	junction_1	95383.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	346	3933	30.0	1	True	ATTAAA	-16
PB.8435.20	chr3	+	4241	6	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	29	78	combination_of_known_junctions	FALSE	canonical	1	14260	junction_4	18402.808387852114	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	561	4139	85.0	-4630	False	NA	NA
PB.8435.21	chr3	+	3500	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	30	-393	combination_of_known_junctions	FALSE	canonical	1	14260	junction_3	39579.10035849097	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3186	315	3500	20.0	-4629	False	NA	NA
PB.8435.26	chr3	+	3900	3	full-splice_match	ZBTB38	ENST00000510338.5	644	3	1	-3257	1	83	multi-exon	FALSE	canonical	1	92943	junction_1	54202.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	206	3793	75.0	-6	True	NA	NA
PB.8435.27	chr3	+	6842	4	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	-21	718	intron_retention	FALSE	canonical	1	14260	junction_2	32642.36689062578	NA	2	NA	TRUE	NA	NA	NA	C	coding	1192	3579	335	3913	20.0	-28	True	AATAAA	-17
PB.8435.24	chr3	+	4152	3	full-splice_match	ZBTB38	ENST00000509883.5	2659	3	-111	-1382	-111	83	multi-exon	FALSE	canonical	1	10580	junction_1	95383.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	458	4045	75.0	-1933	False	NA	NA
PB.8435.25	chr3	+	3204	3	full-splice_match	ZBTB38	ENST00000509883.5	2659	3	-86	-459	-86	459	multi-exon	FALSE	canonical	1	10580	junction_1	95383.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2772	433	3204	55.0	-1908	False	NA	NA
PB.277.6	chr1	-	3742	10	full-splice_match	SFPQ	ENST00000357214.5	3747	10	3	2	3	-2	multi-exon	FALSE	canonical	1	1297136	junction_9	1381324.230798471	NA	3	NA	TRUE	NA	NA	NA	C	coding	707	2124	97	2220	20.0	-1	True	CATAAA	-16
PB.4892.8	chr17	+	2662	3	incomplete-splice_match	SUZ12	ENST00000578106.1	1367	4	1209	-1662	1209	-7	5prime_fragment	FALSE	canonical	1	370683	junction_1	30055.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	25	627	5.0	-4196	False	TATAAA	-6
PB.9944.5	chr6	+	2514	13	full-splice_match	ZNF76	ENST00000339411.5	2447	13	-67	0	35	0	multi-exon	FALSE	canonical	1	73050	junction_11	79018.9613805868	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	232	1779	10.0	-28	True	AATAAA	-14
PB.10041.2	chr6	-	4504	24	novel_in_catalog	DST	novel	16742	84	NA	NA	-3896	0	combination_of_known_junctions	FALSE	canonical	1	69155	junction_5	133636.16922397254	NA	0	NA	TRUE	NA	NA	NA	B	coding	1226	3681	58	3738	30.0	-3901	False	AATAAA	-18
PB.277.1	chr1	-	2303	12	novel_in_catalog	SFPQ	novel	440	2	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	307041	junction_3	1743498.889838633	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	97	2106	0.0	-1	True	AATAAA	-17
PB.4892.2	chr17	+	3805	16	full-splice_match	SUZ12	ENST00000322652.9	4491	16	273	413	224	-17	multi-exon	FALSE	canonical	1	7187	junction_3	154284.2612679451	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	182	2176	90.0	242	False	NA	NA
PB.8403.2	chr3	+	2404	10	full-splice_match	ACPP	ENST00000336375.9	3125	10	2	719	0	-687	multi-exon	FALSE	canonical	1	1503221	junction_8	166952.23299946057	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	89	1249	75.0	0	True	NA	NA
PB.4892.1	chr17	+	4213	17	novel_not_in_catalog	SUZ12	novel	4491	16	NA	NA	11	-7	any annotated donor/acceptor	FALSE	canonical	1	1216	junction_1	172641.7657877505	NA	2	NA	TRUE	NA	NA	NA	C	coding	664	1995	184	2178	5.0	-20	False	TATAAA	-6
PB.10099.1	chr6	-	5664	2	full-splice_match	CNR1	ENST00000369501.2	6031	2	363	4	-81	-4	multi-exon	FALSE	canonical	1	15784	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	472	1419	258	1676	30.0	-1	True	AATAAA	-26
PB.277.8	chr1	-	2597	10	full-splice_match	SFPQ	ENST00000357214.5	3747	10	473	677	473	-677	multi-exon	FALSE	canonical	1	1297136	junction_9	1381324.230798471	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	260	1750	35.0	469	False	ATTAAA	-7
PB.7354.1	chr20	-	1910	1	antisense	novelGene_PTPN1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	14	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7327.1	chr20	+	1549	9	full-splice_match	CD40	ENST00000372285.7	1729	9	-20	200	-20	4	multi-exon	FALSE	canonical	1	319082	junction_1	97925.89534813749	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	93	926	30.0	-18	True	NA	NA
PB.7327.2	chr20	+	1165	9	full-splice_match	CD40	ENST00000372285.7	1729	9	-8	572	-8	165	multi-exon	FALSE	canonical	1	319082	junction_1	97925.89534813749	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	81	914	10.0	-6	True	ATTAAA	-12
PB.7327.3	chr20	+	1765	9	novel_not_in_catalog	CD40	novel	1729	9	NA	NA	-6	-10	any annotated donor/acceptor	FALSE	canonical	1	12178	junction_6	168545.81824717388	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	79	792	55.0	-4	True	NA	NA
PB.7327.4	chr20	+	2245	9	full-splice_match	CD40	ENST00000372285.7	1729	9	-2	-514	-2	514	multi-exon	FALSE	canonical	1	319082	junction_1	97925.89534813749	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	75	908	20.0	0	True	AATAAA	-17
PB.7327.5	chr20	+	3237	6	novel_not_in_catalog	CD40	novel	1729	9	NA	NA	-1	-30	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	200221.22437084434	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	74	769	70.0	1	True	NA	NA
PB.7327.6	chr20	+	1707	9	full-splice_match	CD40	ENST00000372285.7	1729	9	12	10	6	-10	multi-exon	FALSE	canonical	1	319082	junction_1	97925.89534813749	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	61	894	55.0	-1	True	NA	NA
PB.7327.7	chr20	+	1359	9	full-splice_match	CD40	ENST00000372285.7	1729	9	21	349	15	-145	multi-exon	FALSE	canonical	1	319082	junction_1	97925.89534813749	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	52	885	55.0	8	True	NA	NA
PB.7327.8	chr20	+	2935	8	novel_in_catalog	CD40	novel	1729	9	NA	NA	-18	0	intron_retention	FALSE	canonical	1	319082	junction_1	97155.63147226984	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	47	781	40.0	-499	False	NA	NA
PB.7327.9	chr20	+	4285	4	novel_not_in_catalog	CD40	novel	1729	9	NA	NA	-3	28	intron_retention	FALSE	non_canonical	0	0	junction_2	211598.93405896184	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	3106	3741	45.0	-1	True	NA	NA
PB.9944.4	chr6	+	2572	13	novel_in_catalog	ZNF76	novel	1476	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	73050	junction_11	80661.64393109446	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	290	1837	10.0	2	True	AATAAA	-14
PB.11328.9	chr8	+	3253	24	full-splice_match	FAM91A1	ENST00000334705.11	5511	24	-2	2260	-1	350	multi-exon	FALSE	canonical	1	11858	junction_4	105462.14276371308	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	249	2765	40.0	16	True	AATAAA	-20
PB.11328.8	chr8	+	2843	24	novel_not_in_catalog	FAM91A1	novel	2706	23	NA	NA	-11	-5	any annotated donor/acceptor	FALSE	canonical	1	5404	junction_23	105817.07184753146	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	259	2787	30.0	6	True	AATAAA	-25
PB.11328.3	chr8	+	3744	24	full-splice_match	FAM91A1	ENST00000334705.11	5511	24	-6	1773	-5	837	multi-exon	FALSE	canonical	1	11858	junction_4	105462.14276371308	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	253	2769	65.0	12	True	NA	NA
PB.11328.2	chr8	+	4289	24	full-splice_match	FAM91A1	ENST00000334705.11	5511	24	10	1212	10	-533	multi-exon	FALSE	canonical	1	11858	junction_4	105462.14276371308	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	237	2753	20.0	28	True	ATTAAA	-19
PB.336.12	chr1	-	2582	13	full-splice_match	FOXJ3	ENST00000361346.5	5225	13	-4	2647	-4	-2647	multi-exon	FALSE	canonical	1	110404	junction_12	81061.5742803306	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	196	2064	20.0	-5	True	AATAGA	-16
PB.336.13	chr1	-	2429	13	full-splice_match	FOXJ3	ENST00000361346.5	5225	13	0	2796	0	-2796	multi-exon	FALSE	canonical	1	110404	junction_12	81061.5742803306	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	192	2060	45.0	-1	True	TATAAA	-26
PB.11328.7	chr8	+	4366	15	incomplete-splice_match	FAM91A1	ENST00000521166.5	2706	23	-14	18040	-14	5084	3prime_fragment	FALSE	canonical	1	11858	junction_4	114988.46911580717	NA	4	NA	TRUE	NA	NA	NA	C	coding	483	1452	262	1713	15.0	3	True	AATAAA	-19
PB.3306.5	chr14	-	2084	8	novel_in_catalog	METTL3	novel	1462	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	13952	junction_3	256829.38334161195	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	123	1283	20.0	-6	True	AATAAA	-20
PB.11328.5	chr8	+	5597	25	novel_not_in_catalog	FAM91A1	novel	2706	23	NA	NA	-17	-16	any annotated donor/acceptor	FALSE	canonical	1	482	junction_1	104659.00425893714	NA	18	1	TRUE	NA	NA	NA	C	coding	753	2262	604	2865	40.0	0	True	AATAAA	-14
PB.11328.4	chr8	+	5572	25	novel_not_in_catalog	FAM91A1	novel	2706	23	NA	NA	-17	-4	any annotated donor/acceptor	FALSE	canonical	1	11858	junction_4	90658.8780653484	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	1821	2828	30.0	0	True	AATAAA	-26
PB.11759.25	chr9	-	1734	1	novel_in_catalog	TRAF1	novel	6324	8	NA	NA	2603	-22040	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-4	True	NA	NA
PB.10929.3	chr7	+	1851	10	incomplete-splice_match	NOS3	ENST00000461406.5	3644	24	17809	-29	-24	29	5prime_fragment	FALSE	canonical	1	39383	junction_3	16373.937559728158	NA	0	NA	TRUE	NA	NA	NA	B	coding	446	1341	177	1517	40.0	10	True	NA	NA
PB.10728.1	chr7	+	2308	12	full-splice_match	AGFG2	ENST00000300176.8	4796	12	-45	2533	-31	-275	multi-exon	FALSE	canonical	1	131914	junction_6	44226.604832292236	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	168	1613	50.0	2	True	NA	NA
PB.10728.2	chr7	+	2394	11	novel_not_in_catalog	AGFG2	novel	915	7	NA	NA	-20	26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	81447.51081868616	NA	9	1	TRUE	NA	NA	NA	C	coding	413	1242	157	1398	40.0	-45	True	NA	NA
PB.10728.3	chr7	+	2595	12	full-splice_match	AGFG2	ENST00000300176.8	4796	12	-31	2232	-17	26	multi-exon	FALSE	canonical	1	131914	junction_6	44226.604832292236	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	154	1599	40.0	-42	True	NA	NA
PB.8115.1	chr3	-	2401	6	novel_not_in_catalog	AC104452.1	novel	4453	14	NA	NA	1	-2728	intron_retention	TRUE	non_canonical	0	0	junction_1	66349.54532293345	NA	0	NA	TRUE	NA	NA	NA	B	coding	171	516	71	586	5.0	0	True	NA	NA
PB.171.3	chr1	+	2303	3	full-splice_match	PNRC2	ENST00000334351.7	2416	3	16	97	0	-81	multi-exon	FALSE	canonical	1	96250	junction_2	14564.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	396	815	45.0	0	True	AATAAA	-40
PB.589.11	chr1	+	3289	6	novel_in_catalog	SARS	novel	1852	11	NA	NA	0	-1039	intron_retention	FALSE	canonical	1	1388592	junction_5	383311.95582606085	NA	2	NA	TRUE	NA	NA	NA	C	coding	203	612	62	673	60.0	14	True	AATAAA	-5
PB.8115.2	chr3	-	2097	7	novel_not_in_catalog	AC104452.1	novel	4453	14	NA	NA	-7	-2731	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	64591.184649859315	NA	1	NA	TRUE	NA	NA	NA	B	coding	213	642	83	724	10.0	-12	True	NA	NA
PB.171.2	chr1	+	2316	3	full-splice_match	PNRC2	ENST00000471915.5	380	3	55	-1991	55	-6	multi-exon	FALSE	canonical	1	9279	junction_1	43485.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	318	737	30.0	0	True	AATAAA	-29
PB.11237.6	chr8	+	3084	13	full-splice_match	TMEM67	ENST00000519845.5	1964	13	240	-1360	240	0	multi-exon	FALSE	canonical	1	2131	junction_1	19287.236301214565	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	296	1480	35.0	232	False	ATTAAA	-20
PB.171.1	chr1	+	3324	2	incomplete-splice_match	PNRC2	ENST00000471915.5	380	3	719	-1991	0	-6	5prime_fragment	FALSE	canonical	1	96250	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	1326	1745	30.0	0	True	AATAAA	-29
PB.7836.1	chr22	+	3223	2	incomplete-splice_match	AL022316.1	ENST00000428765.1	572	4	136	2656	136	-2656	3prime_fragment	FALSE	canonical	1	5464	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	151	456	2107	2562	80.0	-2240	False	NA	NA
PB.7836.3	chr22	+	2742	1	novel_in_catalog	AL022316.1	novel	572	4	NA	NA	2325	-3106	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	151	456	2076	2531	40.0	-51	False	NA	NA
PB.7836.2	chr22	+	3208	1	novel_in_catalog	AL022316.1	novel	572	4	NA	NA	2309	-2656	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	151	456	2092	2547	80.0	-67	False	NA	NA
PB.1351.5	chr10	+	2910	9	full-splice_match	MAP3K8	ENST00000263056.5	3096	9	186	0	-18	0	multi-exon	FALSE	canonical	1	38246	junction_1	41020.80849683944	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	511	1914	20.0	-2	True	AATAAA	-17
PB.1351.4	chr10	+	3097	10	novel_not_in_catalog	MAP3K8	novel	3096	9	NA	NA	27	0	any annotated donor/acceptor	FALSE	canonical	1	13782	junction_1	49221.0136924625	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	698	2101	20.0	-3160	False	AATAAA	-17
PB.1351.7	chr10	+	2713	9	novel_in_catalog	MAP3K8	novel	3096	9	NA	NA	25	0	no_combination_of_known_junctions	FALSE	canonical	1	36675	junction_1	41363.940500755	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	314	1717	20.0	0	True	AATAAA	-17
PB.1351.6	chr10	+	2735	9	full-splice_match	MAP3K8	ENST00000263056.5	3096	9	188	173	-16	-173	multi-exon	FALSE	canonical	1	38246	junction_1	41020.80849683944	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	509	1912	30.0	0	True	ATTAAA	-15
PB.1351.1	chr10	+	2679	8	full-splice_match	MAP3K8	ENST00000542547.5	2782	8	104	-1	-16	1	multi-exon	FALSE	canonical	1	44979	junction_1	28193.478184190913	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	278	1681	15.0	0	True	AATAAA	-19
PB.6429.1	chr2	-	4861	24	novel_not_in_catalog	DHX57	novel	4859	24	NA	NA	204	0	any annotated donor/acceptor	TRUE	canonical	1	3220	junction_23	60354.09009001438	NA	0	NA	TRUE	NA	NA	NA	C	coding	1386	4161	138	4298	50.0	242	False	ATTAAA	-10
PB.1351.3	chr10	+	2530	1	novel_in_catalog	MAP3K8	novel	3096	9	NA	NA	-18	-2829	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	327	692	80.0	-2	True	NA	NA
PB.1351.2	chr10	+	2833	9	novel_not_in_catalog	MAP3K8	novel	3096	9	NA	NA	15	-45	any annotated donor/acceptor	FALSE	canonical	1	13782	junction_1	40779.72000405809	NA	5	NA	TRUE	NA	NA	NA	C	coding	467	1404	479	1882	35.0	0	True	AATAAA	-18
PB.7967.6	chr3	-	2955	10	novel_in_catalog	RFTN1	novel	616	5	NA	NA	39	-2	intron_retention	FALSE	canonical	1	36666	junction_9	173420.01520457654	NA	9	NA	TRUE	NA	NA	NA	C	coding	578	1737	238	1974	20.0	31	True	AATAAA	-24
PB.7967.7	chr3	-	2577	8	novel_in_catalog	RFTN1	novel	616	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1122	junction_7	258463.15718761107	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	84	1253	20.0	-1	True	AATAAA	-24
PB.7967.4	chr3	-	2802	8	novel_in_catalog	RFTN1	novel	616	5	NA	NA	4	-1	intron_retention	FALSE	canonical	1	3367	junction_1	194675.93289277816	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	270	1820	20.0	-4	True	AATAAA	-25
PB.7967.5	chr3	-	2655	9	novel_in_catalog	RFTN1	novel	616	5	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	1127	junction_8	192360.3965410695	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	765	1673	20.0	-24	False	AATAAA	-25
PB.4353.2	chr16	-	2909	3	full-splice_match	KCTD13	ENST00000567795.3	2878	3	3	-34	3	-1	multi-exon	FALSE	canonical	0	0	junction_1	100541.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	170	691	20.0	12	True	NA	NA
PB.9471.10	chr5	-	2886	23	novel_not_in_catalog	BRD8	novel	4388	27	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	175444.7631016951	NA	4	2	TRUE	NA	NA	NA	C	coding	852	2559	17	2575	55.0	-1	True	AATAAA	-4
PB.7967.1	chr3	-	3830	11	novel_not_in_catalog	RFTN1	novel	616	5	NA	NA	7	-1	intron_retention	FALSE	canonical	1	4068	junction_8	227603.71854099832	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	1253	2848	20.0	-1	True	AATAAA	-25
PB.330.8	chr1	+	3371	9	incomplete-splice_match	NFYC	ENST00000372652.5	2363	10	-29	2	-29	0	intron_retention	FALSE	canonical	1	39437	junction_1	136372.7208681574	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	298	1239	20.0	-38	True	AATAAA	-14
PB.7967.8	chr3	-	2876	9	novel_in_catalog	RFTN1	novel	616	5	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	15596	junction_3	198548.6966227917	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	276	1553	20.0	-10	True	AATAAA	-23
PB.7967.9	chr3	-	2858	10	novel_in_catalog	RFTN1	novel	616	5	NA	NA	6	-3	intron_retention	FALSE	canonical	1	6872	junction_9	181884.97108690412	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	142	1878	20.0	-12	True	AATAAA	-23
PB.775.18	chr1	-	1374	8	full-splice_match	TPM3	ENST00000368533.7	3131	8	-17	1774	-8	30	multi-exon	FALSE	canonical	1	380074	junction_4	711882.2453578074	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	71	817	80.0	-3	True	NA	NA
PB.8513.1	chr3	-	2319	8	novel_not_in_catalog	PHC3	novel	913	4	NA	NA	-1	6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	98150.91331064772	NA	2	1	TRUE	NA	NA	NA	C	coding	319	960	32	991	25.0	-14	True	AATAAA	-23
PB.330.4	chr1	+	1471	10	full-splice_match	NFYC	ENST00000447388.7	1950	10	-7	486	-7	-9	multi-exon	FALSE	canonical	1	219416	junction_3	80537.08831217124	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	175	1182	20.0	-2	True	ATTAAA	-24
PB.5877.2	chr19	+	2695	6	full-splice_match	ZNF714	ENST00000610902.4	2671	6	-40	16	-5	-16	multi-exon	FALSE	canonical	1	28485	junction_5	16657.79406764293	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	357	2024	80.0	-8736	False	NA	NA
PB.5877.3	chr19	+	2140	5	full-splice_match	ZNF714	ENST00000456283.6	6812	5	-28	4700	-2	-26	multi-exon	FALSE	canonical	1	52713	junction_4	11254.046325100142	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	354	2021	95.0	-8733	False	NA	NA
PB.5877.1	chr19	+	2139	5	full-splice_match	ZNF714	ENST00000620627.1	2066	5	-99	26	-8	-26	multi-exon	FALSE	canonical	1	36014	junction_4	15927.784913477455	NA	1	1	TRUE	NA	NA	NA	C	coding	400	1203	818	2020	95.0	4	True	NA	NA
PB.152.9	chr1	-	2337	16	incomplete-splice_match	USP48	ENST00000400301.5	4309	26	-11	28446	-11	8380	3prime_fragment	FALSE	canonical	1	336773	junction_5	86404.0403166426	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2088	250	2337	30.0	-1	True	NA	NA
PB.330.6	chr1	+	2382	11	novel_in_catalog	NFYC	novel	943	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1834	junction_8	157466.23941645396	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	163	1209	20.0	10	True	AATAAA	-14
PB.5954.6	chr19	+	3000	5	novel_not_in_catalog	ZNF567	novel	542	4	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	374	junction_2	35029.91534032019	NA	0	NA	TRUE	NA	NA	NA	B	coding	599	1800	547	2346	30.0	1787	False	NA	NA
PB.5954.7	chr19	+	2986	5	novel_not_in_catalog	ZNF567	novel	542	4	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	2267	junction_1	37371.865985658245	NA	0	NA	TRUE	NA	NA	NA	B	coding	647	1944	390	2333	35.0	1787	False	NA	NA
PB.5954.4	chr19	+	2692	5	novel_in_catalog	ZNF567	novel	542	4	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	63	junction_1	38186.35302369159	NA	2	NA	TRUE	NA	NA	NA	B	coding	647	1944	96	2039	35.0	-6	True	NA	NA
PB.5954.5	chr19	+	2929	4	novel_not_in_catalog	ZNF567	novel	542	4	NA	NA	-1	12	any annotated donor/acceptor	FALSE	canonical	1	496	junction_1	43160.875503425814	NA	74	1	TRUE	NA	NA	NA	B	coding	652	1959	300	2258	10.0	1787	False	NA	NA
PB.5954.2	chr19	+	2643	4	novel_in_catalog	ZNF567	novel	542	4	NA	NA	-16	10	no_combination_of_known_junctions	FALSE	canonical	1	386	junction_1	43212.17164950943	NA	0	NA	TRUE	NA	NA	NA	B	coding	616	1851	124	1974	10.0	-16	True	NA	NA
PB.5954.3	chr19	+	2440	4	novel_in_catalog	ZNF567	novel	542	4	NA	NA	-7	-178	no_combination_of_known_junctions	FALSE	canonical	1	386	junction_1	43212.17164950943	NA	0	NA	TRUE	NA	NA	NA	B	coding	616	1851	115	1965	15.0	-7	True	NA	NA
PB.11240.6	chr8	-	1762	8	incomplete-splice_match	FSBP	ENST00000517506.2	2472	12	15	13418	5	-13418	3prime_fragment	FALSE	canonical	1	5484	junction_7	29528.03433059118	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1044	719	1762	40.0	-2	True	AATAAA	-13
PB.5954.1	chr19	+	2763	5	novel_in_catalog	ZNF567	novel	542	4	NA	NA	-38	11	combination_of_known_junctions	FALSE	canonical	1	1284	junction_1	39970.72452120427	NA	0	NA	TRUE	NA	NA	NA	B	coding	613	1842	252	2093	5.0	-38	False	NA	NA
PB.11240.8	chr8	-	3419	5	novel_not_in_catalog	RAD54B	novel	3068	15	NA	NA	-5	5614	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45062.61857127258	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	484	960	40.0	0	True	AATAAA	-16
PB.11240.9	chr8	-	5865	4	full-splice_match	RAD54B	ENST00000297592.5	1879	4	-52	-3934	-5	3934	multi-exon	FALSE	canonical	1	33331	junction_1	33425.5078146416	NA	3	NA	TRUE	NA	NA	NA	C	coding	158	477	484	960	35.0	0	True	AATAAA	-35
PB.5954.8	chr19	+	2844	6	novel_not_in_catalog	ZNF567	novel	542	4	NA	NA	-1	7	any annotated donor/acceptor	FALSE	canonical	1	3002	junction_3	29874.884337181957	NA	1	NA	TRUE	NA	NA	NA	B	coding	670	2013	166	2178	15.0	1787	False	NA	NA
PB.5954.9	chr19	+	2775	5	incomplete-splice_match	ZNF567	ENST00000536254.6	2825	6	1771	-7	-1	7	5prime_fragment	FALSE	canonical	1	33605	junction_1	26808.760909448985	NA	0	NA	TRUE	NA	NA	NA	B	coding	647	1944	166	2109	15.0	1787	False	NA	NA
PB.3159.11	chr13	+	3306	16	novel_not_in_catalog	RB1	novel	4793	27	NA	NA	14551	20269	any annotated donor/acceptor	FALSE	canonical	1	274	junction_1	104312.04919756661	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	214	1584	40.0	NA	False	ATTAAA	-21
PB.9440.9	chr5	+	3460	20	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	19	30286	19	6719	3prime_fragment	FALSE	canonical	1	187739	junction_1	94179.63783335044	NA	0	NA	TRUE	NA	NA	NA	C	coding	1030	3090	369	3458	65.0	-22	True	NA	NA
PB.3159.13	chr13	+	3886	20	incomplete-splice_match	RB1	ENST00000267163.5	4793	27	59089	2	-18435	-2	5prime_fragment	FALSE	canonical	1	185716	junction_1	90003.65245337196	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	180	2069	15.0	NA	False	AATAAA	-19
PB.9440.4	chr5	+	1582	9	incomplete-splice_match	RAD50	ENST00000453394.5	2076	12	-216	6111	77	850	3prime_fragment	FALSE	canonical	1	187739	junction_1	85460.90070867204	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1272	311	1582	65.0	-253	False	AAAAAG	-9
PB.9440.5	chr5	+	2650	15	novel_not_in_catalog	AC116366.3	novel	7893	27	NA	NA	107271	-42696	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	118405.93157596645	NA	0	NA	TRUE	NA	NA	NA	B	coding	763	2289	360	2648	60.0	-56	True	AATAGA	-15
PB.9440.6	chr5	+	3339	21	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	243	28244	-50	8761	3prime_fragment	FALSE	canonical	1	187739	junction_1	92587.36573122437	NA	1	NA	TRUE	NA	NA	NA	C	coding	1065	3195	145	3339	70.0	-25	True	NA	NA
PB.7844.1	chr22	-	1754	11	full-splice_match	TTLL1	ENST00000266254.11	1645	11	16	-125	7	125	multi-exon	FALSE	canonical	1	43458	junction_9	37654.0316906437	NA	0	NA	TRUE	NA	NA	NA	A	coding	423	1272	226	1497	45.0	-22	True	ATTAAA	-19
PB.2942.2	chr12	+	2575	8	novel_in_catalog	PRKAB1	novel	2610	7	NA	NA	90	-2	intron_retention	FALSE	canonical	1	19088	junction_2	169397.21226472774	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	964	1278	20.0	-11	True	AATAAA	-19
PB.2942.3	chr12	+	2212	7	full-splice_match	PRKAB1	ENST00000229328.9	2610	7	392	6	-5	0	multi-exon	FALSE	canonical	1	235245	junction_1	82663.11838907092	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	101	913	15.0	12	True	AATAAA	-21
PB.9440.2	chr5	+	2006	11	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	39	54445	39	-1628	3prime_fragment	FALSE	canonical	1	187739	junction_1	85653.3198460515	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1656	349	2004	60.0	-2	True	TTTAAA	-45
PB.2942.1	chr12	+	2283	8	full-splice_match	PRKAB1	ENST00000541640.5	2303	8	19	1	19	-1	multi-exon	TRUE	canonical	1	16846	junction_1	138617.3543833704	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	173	985	20.0	3	True	AATAAA	-20
PB.11408.2	chr8	+	2231	3	full-splice_match	LRRC14	ENST00000528528.1	1408	3	-99	-724	-99	-8	multi-exon	FALSE	canonical	1	82616	junction_2	31734.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	315	680	50.0	-6719	False	NA	NA
PB.11092.1	chr8	+	4648	18	novel_in_catalog	DDHD2	novel	568	4	NA	NA	-84	-1	combination_of_known_junctions	FALSE	canonical	1	19715	junction_17	107696.94498367449	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	282	2417	20.0	-21	True	AGTAAA	-18
PB.11408.1	chr8	+	2695	1	incomplete-splice_match	LRRC14	ENST00000292524.5	5328	4	4470	7	-105	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	321	686	50.0	-6725	False	NA	NA
PB.11408.4	chr8	+	2472	2	novel_in_catalog	LRRC14	novel	5328	4	NA	NA	-38	-8	intron_retention	FALSE	canonical	1	82616	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	254	619	50.0	0	True	NA	NA
PB.9608.2	chr5	+	1844	7	full-splice_match	MAT2B	ENST00000280969.9	2226	7	196	186	58	1	multi-exon	FALSE	canonical	1	178752	junction_1	373888.6824051601	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	86	1057	15.0	-4	True	AATAAA	-20
PB.9608.3	chr5	+	3257	6	full-splice_match	MAT2B	ENST00000523606.1	3210	6	-47	0	-5	0	multi-exon	FALSE	canonical	1	511799	junction_1	284446.9536507642	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	2064	2471	20.0	-40	True	AATAAA	-19
PB.9608.1	chr5	+	1994	7	full-splice_match	MAT2B	ENST00000280969.9	2226	7	196	36	58	-22	multi-exon	FALSE	canonical	1	178752	junction_1	373888.6824051601	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	86	1057	70.0	-4	True	AATATA	-16
PB.9608.6	chr5	+	2009	7	full-splice_match	MAT2B	ENST00000321757.10	2103	7	72	22	6	-22	multi-exon	FALSE	canonical	1	511799	junction_1	267142.6529050329	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	68	1072	70.0	1	True	AATATA	-16
PB.9608.4	chr5	+	2070	7	novel_not_in_catalog	MAT2B	novel	2226	7	NA	NA	-4	-22	any annotated donor/acceptor	FALSE	canonical	1	7950	junction_3	455817.5705379718	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	108	1133	70.0	-39	True	AATATA	-16
PB.9608.5	chr5	+	1850	7	full-splice_match	MAT2B	ENST00000321757.10	2103	7	79	174	1	-1	multi-exon	FALSE	canonical	1	511799	junction_1	267142.6529050329	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	61	1065	20.0	8	True	AATAAA	-18
PB.8409.2	chr3	+	1898	7	incomplete-splice_match	SRPRB	ENST00000466490.6	2827	8	21764	696	182	-696	5prime_fragment	FALSE	canonical	1	732765	junction_6	39848.91145488028	NA	0	NA	TRUE	NA	NA	NA	B	coding	271	816	53	868	35.0	-48	True	ATTAAA	-18
PB.8409.3	chr3	+	1978	8	novel_in_catalog	SRPRB	novel	2827	8	NA	NA	189	682	combination_of_known_junctions	FALSE	canonical	1	11430	junction_7	275898.8536290731	NA	1	NA	TRUE	NA	NA	NA	B	coding	271	816	46	861	30.0	-41	True	AATAAA	-21
PB.684.1	chr1	+	1567	10	novel_not_in_catalog	AC243547.3	novel	935	6	NA	NA	33355	3445	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	218	657	511	1167	5.0	-4103	False	AATAAA	-15
PB.8409.1	chr3	+	1775	7	incomplete-splice_match	SRPRB	ENST00000466490.6	2827	8	21775	808	193	775	5prime_fragment	FALSE	canonical	1	732765	junction_6	39848.91145488028	NA	0	NA	TRUE	NA	NA	NA	B	coding	271	816	42	857	5.0	-37	True	AAAAAG	-17
PB.8409.4	chr3	+	2389	7	incomplete-splice_match	SRPRB	ENST00000466490.6	2827	8	21777	192	195	-192	5prime_fragment	FALSE	canonical	1	732765	junction_6	39848.91145488028	NA	3	NA	TRUE	NA	NA	NA	B	coding	271	816	40	855	25.0	-35	True	AATGAA	-30
PB.8409.5	chr3	+	2568	7	incomplete-splice_match	SRPRB	ENST00000466490.6	2827	8	21789	1	207	-1	5prime_fragment	FALSE	canonical	1	732765	junction_6	39848.91145488028	NA	1	NA	TRUE	NA	NA	NA	B	coding	271	816	28	843	10.0	-23	True	AATAAA	-31
PB.2699.1	chr12	-	1914	15	novel_in_catalog	ARHGAP9	novel	2597	18	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	1	103699	junction_1	169939.3085757503	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	118	1488	20.0	0	True	CATAAA	-23
PB.9492.1	chr5	-	2566	5	incomplete-splice_match	NRG2	ENST00000361474.5	3020	10	-5	16727	0	4997	3prime_fragment	FALSE	canonical	1	22011	junction_1	6958.811644239267	NA	0	NA	TRUE	NA	NA	NA	A	coding	421	1266	231	1496	90.0	-1	True	NA	NA
PB.2699.3	chr12	-	2078	16	novel_in_catalog	ARHGAP9	novel	2597	18	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	1	21897	junction_8	179789.4280588143	NA	31	3	TRUE	NA	NA	NA	C	coding	566	1701	122	1822	20.0	-4	True	CATAAA	-20
PB.2699.2	chr12	-	2253	15	novel_in_catalog	ARHGAP9	novel	2597	18	NA	NA	-27	3	intron_retention	FALSE	canonical	1	141412	junction_14	158268.49148946875	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	792	1997	20.0	1965	False	CATAAA	-20
PB.2699.5	chr12	-	2025	16	novel_in_catalog	ARHGAP9	novel	2597	18	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	42289	junction_15	170014.3093255388	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	129	1772	15.0	1967	False	CATAAA	-17
PB.2699.4	chr12	-	2682	17	incomplete-splice_match	ARHGAP9	ENST00000393791.7	2597	18	213	7	-5	2	5prime_fragment	FALSE	canonical	1	57393	junction_16	178888.19453187793	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	232	2427	20.0	-76	True	CATAAA	-19
PB.2699.7	chr12	-	1905	15	novel_in_catalog	ARHGAP9	novel	2597	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	13224	junction_12	184484.96296940147	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	108	1658	15.0	-7	True	CATAAA	-11
PB.2699.6	chr12	-	2546	16	full-splice_match	ARHGAP9	ENST00000424809.6	2569	16	17	6	17	0	multi-exon	FALSE	canonical	1	57393	junction_15	184840.89556812547	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	456	2132	15.0	-54	True	CATAAA	-11
PB.11490.3	chr9	+	4153	20	full-splice_match	IFT74	ENST00000380062.9	2160	20	54	-2047	15	2047	multi-exon	FALSE	canonical	1	97047	junction_2	27771.75973155568	NA	3	NA	TRUE	NA	NA	NA	C	coding	600	1803	110	1912	45.0	8	True	AATAAA	-34
PB.3573.1	chr14	+	2579	3	intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	17594	junction_2	3745.5	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	0	True	AATAAA	-16
PB.7785.11	chr22	-	2039	1	incomplete-splice_match	CBX6	ENST00000407418.7	6122	5	6017	2809	5919	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	145	438	1183	1620	90.0	6036	False	NA	NA
PB.1818.12	chr11	+	3781	22	incomplete-splice_match	CTR9	ENST00000361367.6	4586	25	4689	-3	4224	3	5prime_fragment	FALSE	canonical	1	227951	junction_2	118943.63810601931	NA	1	NA	TRUE	NA	NA	NA	C	coding	1029	3090	51	3140	15.0	4371	False	AATAAA	-18
PB.1818.11	chr11	+	3046	24	novel_not_in_catalog	CTR9	novel	4586	25	NA	NA	-197	949	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	126817.0885511334	NA	1	1	TRUE	NA	NA	NA	C	coding	835	2508	159	2666	55.0	6	True	NA	NA
PB.1818.10	chr11	+	4317	25	novel_not_in_catalog	CTR9	novel	4586	25	NA	NA	-203	10	any annotated donor/acceptor	TRUE	canonical	1	72	junction_22	137778.12047696445	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	165	3059	10.0	0	True	AATAAA	-25
PB.3707.2	chr14	+	2589	20	full-splice_match	MTA1	ENST00000405646.5	2709	20	74	46	-4	-44	multi-exon	FALSE	canonical	1	123953	junction_17	285398.29949735745	NA	2	NA	TRUE	NA	NA	NA	C	coding	698	2097	25	2121	85.0	-6	False	NA	NA
PB.3707.3	chr14	+	2672	20	novel_in_catalog	TEX22	novel	508	6	NA	NA	21299	20577	no_combination_of_known_junctions	FALSE	canonical	1	123953	junction_17	308974.27771328914	NA	0	NA	TRUE	NA	NA	NA	B	coding	413	1242	155	1396	85.0	55	True	NA	NA
PB.3707.1	chr14	+	2684	21	full-splice_match	MTA1	ENST00000331320.11	2876	21	146	46	30	-44	multi-exon	FALSE	canonical	1	123953	junction_18	273333.84206618107	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	69	2216	85.0	-1	True	NA	NA
PB.3573.2	chr14	+	2331	3	intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	17594	junction_2	3745.5	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-1	True	ATTAAA	-21
PB.11432.1	chr9	+	3758	12	full-splice_match	SLC1A1	ENST00000262352.7	3722	12	-37	1	-37	-1	multi-exon	FALSE	canonical	1	72021	junction_1	17375.29092734615	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	274	1848	0.0	-20	True	AATAAA	-18
PB.11432.3	chr9	+	3541	12	full-splice_match	SLC1A1	ENST00000262352.7	3722	12	-26	207	-26	-207	multi-exon	FALSE	canonical	1	72021	junction_1	17375.29092734615	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	263	1837	35.0	-9	True	AATAAA	-17
PB.11432.2	chr9	+	2070	1	genic	SLC1A1	novel	NA	NA	NA	NA	-34	-71979	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-17	True	NA	NA
PB.11432.4	chr9	+	3433	13	novel_not_in_catalog	SLC1A1	novel	3722	12	NA	NA	-1	-209	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	32392.449707862314	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	157	1731	45.0	16	True	AATAAA	-15
PB.11340.11	chr8	+	2167	2	incomplete-splice_match	MYC	ENST00000613283.2	1365	3	1139	-317	1139	-97	5prime_fragment	FALSE	canonical	1	1220852	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	531	1850	40.0	-2880	False	AATAAA	-18
PB.8225.10	chr3	+	1772	5	novel_in_catalog	SAMMSON	novel	1657	4	NA	NA	1	-20	combination_of_known_junctions	FALSE	canonical	1	132	junction_4	704.0814494786807	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.10980.2	chr8	-	2663	6	novel_in_catalog	PINX1	novel	1753	6	NA	NA	-3	1881	combination_of_known_junctions	FALSE	canonical	1	5157	junction_1	84882.04001884027	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	124	582	0.0	-12	True	AAAAAG	-13
PB.11340.12	chr8	+	1442	2	incomplete-splice_match	MYC	ENST00000524013.1	2150	3	2388	-53	2014	-9	5prime_fragment	FALSE	canonical	1	1220852	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	55	975	35.0	-2005	False	AATAAA	-27
PB.9273.7	chr5	+	1733	16	full-splice_match	GTF2H2C	ENST00000510979.5	2952	16	-16	1235	1	7	multi-exon	FALSE	canonical	1	588	junction_1	66427.95730112435	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	212	1399	30.0	NA	False	ATTAAA	-21
PB.8757.12	chr4	+	3730	18	full-splice_match	SLC30A9	ENST00000264451.11	6218	18	47	2441	-8	1640	multi-exon	FALSE	canonical	1	386252	junction_8	93952.07859218647	NA	3	NA	TRUE	NA	NA	NA	C	coding	568	1707	134	1840	75.0	-11	True	NA	NA
PB.8757.13	chr4	+	3577	16	novel_in_catalog	SLC30A9	novel	6218	18	NA	NA	-8	56	intron_retention	FALSE	canonical	1	386252	junction_8	98613.12001991531	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	134	1240	35.0	-11	True	AATAAA	-23
PB.8757.10	chr4	+	3209	9	incomplete-splice_match	SLC30A9	ENST00000264451.11	6218	18	43	38746	-12	-27140	3prime_fragment	FALSE	canonical	1	386252	junction_8	75770.41777633273	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	138	1013	70.0	-15	True	NA	NA
PB.8757.11	chr4	+	2378	17	incomplete-splice_match	SLC30A9	ENST00000264451.11	6218	18	46	11550	-9	56	3prime_fragment	FALSE	canonical	1	386252	junction_8	95631.73916365238	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	135	1910	35.0	-12	True	AATAAA	-23
PB.8757.16	chr4	+	1817	1	novel_in_catalog	SLC30A9	novel	6218	18	NA	NA	-4	-28436	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-7	True	NA	NA
PB.8757.17	chr4	+	3109	17	novel_in_catalog	SLC30A9	novel	6218	18	NA	NA	-1	1156	no_combination_of_known_junctions	FALSE	canonical	1	5053	junction_15	147963.35649024515	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	127	1560	30.0	-4	True	AATAAA	-27
PB.8757.14	chr4	+	2821	15	novel_in_catalog	SLC30A9	novel	6218	18	NA	NA	-5	1144	no_combination_of_known_junctions	FALSE	canonical	1	3224	junction_14	156886.79248811604	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	131	1396	15.0	-8	True	AATAAA	-15
PB.8757.15	chr4	+	2135	18	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	-5	7927	any annotated donor/acceptor	FALSE	canonical	1	6381	junction_17	156980.5936196902	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	131	1837	80.0	-8	True	NA	NA
PB.8957.5	chr4	+	3169	10	novel_in_catalog	AC093752.1	novel	605	3	NA	NA	-3	1395	combination_of_known_junctions	FALSE	canonical	1	25890	junction_5	42802.18452484365	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.3282.4	chr14	+	3902	1	novel_in_catalog	DUXAP9	novel	665	6	NA	NA	-6671	-2695	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	81	246	359	604	20.0	NA	False	AATAAA	-24
PB.3282.2	chr14	+	2137	7	novel_not_in_catalog	DUXAP9	novel	596	5	NA	NA	1	580	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	862.8634499927166	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-26
PB.4384.1	chr16	-	2999	2	antisense	novelGene_FBXL19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-8	True	NA	NA
PB.3282.1	chr14	+	2992	3	novel_in_catalog	DUXAP9	novel	596	5	NA	NA	-3	-645	combination_of_known_junctions	FALSE	canonical	1	116	junction_1	399.0	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	AAAAAG	-43
PB.5116.1	chr17	-	1437	1	antisense	novelGene_AC005921.3_AS_novelGene_LUC7L3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11906.1	chr9	-	7208	22	incomplete-splice_match	NOTCH1	ENST00000277541.7	9306	34	31156	12	-1079	-12	5prime_fragment	TRUE	canonical	1	171775	junction_8	52892.888341201695	NA	1	NA	TRUE	NA	NA	NA	B	coding	1785	5358	225	5582	10.0	7055	False	AATAAA	-17
PB.9498.12	chr5	-	2315	11	novel_not_in_catalog	APBB3	novel	2064	8	NA	NA	1	-1	intron_retention	FALSE	canonical	1	28171	junction_2	77560.78146434575	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	126	755	25.0	250	False	AATAAA	-17
PB.9498.11	chr5	-	2683	11	novel_in_catalog	APBB3	novel	2064	8	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	30987	junction_6	75075.77244151405	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	1577	2368	25.0	-1	True	AATAAA	-17
PB.9498.10	chr5	-	2116	12	novel_in_catalog	APBB3	novel	2064	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	30987	junction_6	73414.29794389539	NA	1	1	TRUE	NA	NA	NA	C	coding	209	630	90	719	25.0	9	True	AATAAA	-18
PB.4928.24	chr17	-	5265	14	incomplete-splice_match	SYNRG	ENST00000612223.4	8229	22	88	35714	3	2905	3prime_fragment	FALSE	canonical	1	60436	junction_8	64954.64745907366	NA	2	NA	TRUE	NA	NA	NA	C	coding	878	2637	54	2690	30.0	-11	True	AATAAA	-13
PB.1087.16	chr1	+	2296	10	novel_in_catalog	CD55	novel	2892	10	NA	NA	139	-1	combination_of_known_junctions	FALSE	canonical	1	9082	junction_1	629046.8805957232	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	267	1406	35.0	-20	True	AATAAA	-17
PB.1087.15	chr1	+	1972	10	novel_not_in_catalog	CD55	novel	2892	10	NA	NA	134	0	any annotated donor/acceptor	FALSE	canonical	1	73	junction_1	630700.0969706326	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	710	1081	35.0	-9342	False	AATAAA	-18
PB.1087.14	chr1	+	1452	11	full-splice_match	CD55	ENST00000314754.12	2220	11	-20	788	-20	0	multi-exon	FALSE	canonical	1	41489	junction_10	605341.0977076065	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	86	1408	15.0	3	True	AATAAA	-18
PB.1087.13	chr1	+	2707	11	full-splice_match	CD55	ENST00000314754.12	2220	11	-24	-463	-24	-2	multi-exon	FALSE	canonical	1	41489	junction_10	605341.0977076065	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	90	1412	45.0	-1	True	AATAAA	-17
PB.1087.12	chr1	+	3658	1	novel_in_catalog	CD55	novel	2892	10	NA	NA	-24	-11454	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.1087.11	chr1	+	1848	9	novel_in_catalog	CD55	novel	2892	10	NA	NA	-25	-1	intron_retention	FALSE	canonical	1	201639	junction_8	484712.18956586433	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	91	1197	20.0	-2	True	AATAAA	-17
PB.1087.10	chr1	+	1599	10	full-splice_match	CD55	ENST00000367064.8	2892	10	299	994	-26	96	multi-exon	FALSE	canonical	1	201639	junction_9	518153.7491122319	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	92	1237	75.0	-3	True	TATAAA	-3
PB.9050.1	chr4	+	2238	3	full-splice_match	APELA	ENST00000507152.5	2602	3	367	-3	129	3	multi-exon	FALSE	canonical	1	50459	junction_2	12709.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	116	False	AATAAA	-17
PB.9031.1	chr4	+	2836	8	full-splice_match	ARFIP1	ENST00000356064.3	1302	8	130	-1664	6	-1	multi-exon	FALSE	canonical	1	115625	junction_3	45214.800360871544	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	122	1147	20.0	-27	False	ATTAAA	-15
PB.8027.10	chr3	-	2118	5	full-splice_match	CSRNP1	ENST00000273153.9	3148	5	-17	1047	-17	-564	multi-exon	FALSE	canonical	1	203042	junction_4	66255.34572206231	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	196	1965	20.0	-2	True	NA	NA
PB.9478.1	chr5	+	3112	2	full-splice_match	EGR1	ENST00000239938.4	3138	2	-11	37	-11	-37	multi-exon	FALSE	canonical	1	3059616	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	543	1632	284	1915	75.0	-1	True	NA	NA
PB.9478.2	chr5	+	2419	2	full-splice_match	EGR1	ENST00000239938.4	3138	2	-11	730	-11	-730	multi-exon	FALSE	canonical	1	3059616	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	284	1915	80.0	-1	True	NA	NA
PB.8102.6	chr3	-	1726	12	full-splice_match	DALRD3	ENST00000441576.6	1706	12	-23	3	-11	0	multi-exon	FALSE	canonical	1	75924	junction_3	117937.36804439747	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	24	1574	20.0	-8	True	AATAAA	-18
PB.5160.7	chr17	+	2862	6	full-splice_match	PPM1D	ENST00000305921.7	4778	6	121	1795	35	12	multi-exon	FALSE	canonical	1	165520	junction_4	18609.21984823652	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	112	1929	15.0	-27	True	AATAAA	-26
PB.5160.6	chr17	+	2623	6	full-splice_match	PPM1D	ENST00000305921.7	4778	6	41	2114	41	-307	multi-exon	FALSE	canonical	1	165520	junction_4	18609.21984823652	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	192	2009	30.0	31	True	ATTAAA	-20
PB.5160.5	chr17	+	4563	7	novel_not_in_catalog	PPM1D	novel	1525	6	NA	NA	39	-5	any annotated donor/acceptor	TRUE	canonical	0	0	junction_6	73598.85758718602	NA	1	1	TRUE	NA	NA	NA	C	coding	605	1818	194	2011	45.0	29	True	AATAAA	-12
PB.5160.4	chr17	+	1756	6	full-splice_match	PPM1D	ENST00000305921.7	4778	6	4	3018	4	-1211	multi-exon	FALSE	canonical	1	165520	junction_4	18609.21984823652	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1527	229	1755	55.0	-6	True	NA	NA
PB.5160.3	chr17	+	2593	1	novel_in_catalog	PPM1D	novel	1525	6	NA	NA	4	-31178	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	269	810	229	1038	100.0	-6	True	NA	NA
PB.5160.2	chr17	+	4634	6	full-splice_match	PPM1D	ENST00000305921.7	4778	6	141	3	55	-3	multi-exon	FALSE	canonical	1	165520	junction_4	18609.21984823652	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	92	1909	40.0	-7	True	AATAAA	-14
PB.5160.1	chr17	+	2306	6	full-splice_match	PPM1D	ENST00000305921.7	4778	6	129	2343	43	-536	multi-exon	FALSE	canonical	1	165520	junction_4	18609.21984823652	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	104	1921	25.0	-19	True	ATTAAA	-16
PB.9009.6	chr4	-	2412	1	novel_in_catalog	OTUD4	novel	2498	22	NA	NA	14832	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	NA	False	ATTAAA	-12
PB.9009.9	chr4	-	3124	21	full-splice_match	OTUD4	ENST00000447906.7	7273	21	28	4121	28	-4121	multi-exon	FALSE	canonical	1	5830	junction_20	51016.68042758172	NA	0	NA	TRUE	NA	NA	NA	C	coding	988	2964	161	3124	75.0	492	False	NA	NA
PB.9009.8	chr4	-	4302	21	full-splice_match	OTUD4	ENST00000447906.7	7273	21	-459	3430	-459	-3430	multi-exon	FALSE	canonical	1	5830	junction_20	51016.68042758172	NA	0	NA	TRUE	NA	NA	NA	C	coding	1114	3345	648	3992	5.0	5	True	TATAAA	-30
PB.6972.1	chr2	-	3287	4	full-splice_match	KLF7	ENST00000309446.10	8362	4	114	4961	114	-8	multi-exon	FALSE	canonical	1	149670	junction_2	4504.428364275415	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	264	1172	90.0	1414	False	NA	NA
PB.8520.5	chr3	+	3931	25	novel_in_catalog	FNDC3B	novel	946	4	NA	NA	-16	194	no_combination_of_known_junctions	FALSE	canonical	1	507	junction_15	98267.69363269338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1176	3531	201	3731	85.0	-7	True	NA	NA
PB.6972.6	chr2	-	2258	4	full-splice_match	KLF7	ENST00000309446.10	8362	4	-115	6219	-85	5	multi-exon	FALSE	canonical	1	149670	junction_2	4504.428364275415	NA	3	NA	TRUE	NA	NA	NA	C	coding	302	909	493	1401	20.0	1185	False	AATAAA	-21
PB.8102.1	chr3	-	1920	10	novel_in_catalog	DALRD3	novel	685	2	NA	NA	-6	-1	intron_retention	TRUE	canonical	1	105875	junction_9	103971.80579796087	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	19	1470	10.0	-3	True	AATAAA	-20
PB.11182.1	chr8	+	2387	10	full-splice_match	TERF1	ENST00000276603.9	1677	10	-8	-702	-8	198	multi-exon	FALSE	canonical	1	28382	junction_2	36421.46754319491	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	32	1351	70.0	-8	True	NA	NA
PB.11182.3	chr8	+	968	7	incomplete-splice_match	TERF1	ENST00000276602.10	3268	9	0	16023	0	5063	3prime_fragment	FALSE	canonical	1	28382	junction_2	36789.83170056035	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	945	24	968	65.0	0	True	NA	NA
PB.11182.2	chr8	+	1575	9	full-splice_match	TERF1	ENST00000276602.10	3268	9	-7	1700	-7	-49	multi-exon	FALSE	canonical	1	28382	junction_2	34182.55496594718	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	31	1290	65.0	-7	True	ATTAAA	-11
PB.561.23	chr1	+	2638	12	novel_not_in_catalog	AC118553.2	novel	3175	20	NA	NA	77053	49	any annotated donor/acceptor	FALSE	canonical	1	1379	junction_1	193794.177813763	NA	0	NA	TRUE	NA	NA	NA	B	coding	418	1257	221	1477	35.0	-2206	False	AATAAA	-27
PB.10374.2	chr7	-	2268	1	incomplete-splice_match	GNA12	ENST00000275364.7	4378	4	113491	454	29619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	4251	False	AATAAA	-8
PB.561.21	chr1	+	2923	13	novel_in_catalog	AC118553.2	novel	3175	20	NA	NA	68020	49	no_combination_of_known_junctions	FALSE	canonical	1	19763	junction_1	225870.4694944403	NA	0	NA	TRUE	NA	NA	NA	B	coding	468	1407	356	1762	35.0	6	True	AATAAA	-27
PB.9031.3	chr4	+	2947	9	full-splice_match	ARFIP1	ENST00000451320.6	3424	9	29	448	-5	0	multi-exon	TRUE	canonical	1	56559	junction_1	72954.00154163924	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	136	1257	20.0	6	True	ATTAAA	-16
PB.9401.5	chr5	-	4790	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	164	-1197	27	1197	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	218	892	65.0	0	True	NA	NA
PB.2769.37	chr12	-	2124	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	3608	9	-3608	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	30.0	-1	True	TTTAAA	-18
PB.2769.36	chr12	-	2259	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	3473	9	-3473	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	60.0	-1	True	NA	NA
PB.2237.3	chr11	+	1518	11	full-splice_match	CEP57	ENST00000325542.9	3178	11	13	1647	13	-99	multi-exon	FALSE	canonical	1	241140	junction_10	97688.35203748704	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1293	226	1518	60.0	-65	True	NA	NA
PB.2237.2	chr11	+	2753	12	novel_in_catalog	CEP57	novel	1647	11	NA	NA	4	-463	combination_of_known_junctions	FALSE	canonical	1	23068	junction_2	160761.35751839442	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	306	1781	35.0	-74	True	AATAAA	-16
PB.2237.5	chr11	+	3205	12	novel_in_catalog	CEP57	novel	1647	11	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	23068	junction_2	160761.35751839442	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	295	1770	20.0	-63	True	ATTAAA	-19
PB.2237.4	chr11	+	2268	7	full-splice_match	CEP57	ENST00000538658.5	2084	7	-184	0	14	0	multi-exon	FALSE	canonical	1	259422	junction_2	92625.21541270497	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	225	1037	25.0	-64	True	AGTAAA	-18
PB.2237.7	chr11	+	2445	11	full-splice_match	CEP57	ENST00000325542.9	3178	11	18	715	18	435	multi-exon	FALSE	canonical	1	241140	junction_10	97688.35203748704	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	221	1723	30.0	-60	True	AATAAA	-36
PB.2237.6	chr11	+	6088	6	incomplete-splice_match	CEP57	ENST00000538658.5	2084	7	-181	-857	17	857	intron_retention	FALSE	canonical	1	259422	junction_2	98121.57465389556	NA	3	NA	TRUE	NA	NA	NA	C	coding	235	708	222	929	95.0	-61	True	NA	NA
PB.2237.9	chr11	+	3026	11	novel_not_in_catalog	CEP57	novel	1647	11	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	6506	junction_9	138122.80096092029	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	215	1591	20.0	-54	True	ATTAAA	-19
PB.2237.8	chr11	+	3073	10	full-splice_match	CEP57	ENST00000325486.9	3098	10	24	1	-13	-1	multi-exon	FALSE	canonical	1	22215	junction_7	145537.70039714413	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	215	1639	20.0	-54	True	ATTAAA	-18
PB.6780.8	chr2	+	5801	30	incomplete-splice_match	RIF1	ENST00000444746.6	7897	36	23	10205	6	10073	3prime_fragment	FALSE	canonical	1	33839	junction_1	57784.031371528414	NA	1	NA	TRUE	NA	NA	NA	C	coding	1887	5661	139	5799	45.0	4	True	AAGAAA	-17
PB.6780.9	chr2	+	2984	25	novel_in_catalog	RIF1	novel	7897	36	NA	NA	7	4968	no_combination_of_known_junctions	FALSE	canonical	1	10360	junction_7	61826.35985900294	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2940	44	2983	80.0	5	True	AAAAAG	-18
PB.2769.39	chr12	-	1938	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	3794	9	-3794	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	50.0	-1	True	TATAAA	-21
PB.2769.38	chr12	-	1927	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	10	-3548	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	306	803	20.0	0	True	NA	NA
PB.2546.6	chr12	-	2644	7	novel_in_catalog	SLC2A13	novel	7003	10	NA	NA	12	-17	no_combination_of_known_junctions	FALSE	canonical	1	10376	junction_1	27777.882693190757	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	270	1817	95.0	-1	True	NA	NA
PB.2546.7	chr12	-	1713	7	incomplete-splice_match	SLC2A13	ENST00000280871.8	7003	10	-225	75090	5	14	3prime_fragment	FALSE	canonical	1	55465	junction_6	12432.744717970454	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1437	277	1713	25.0	-8	True	AATAAA	-22
PB.2546.4	chr12	-	3442	10	full-splice_match	SLC2A13	ENST00000280871.8	7003	10	-221	3782	9	-3782	multi-exon	FALSE	canonical	1	55465	junction_9	11710.402891298967	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	273	2219	75.0	-4	True	NA	NA
PB.2546.5	chr12	-	3682	10	novel_in_catalog	SLC2A13	novel	7003	10	NA	NA	21	-3782	no_combination_of_known_junctions	FALSE	canonical	1	10376	junction_4	23121.968341817268	NA	2	1	TRUE	NA	NA	NA	C	coding	515	1548	261	1808	75.0	8	True	NA	NA
PB.2546.2	chr12	-	5267	10	full-splice_match	SLC2A13	ENST00000280871.8	7003	10	-200	1936	30	-1936	multi-exon	FALSE	canonical	1	55465	junction_9	11710.402891298967	NA	2	NA	TRUE	NA	NA	NA	C	coding	648	1947	252	2198	30.0	17	True	AATAAA	-11
PB.2546.3	chr12	-	4072	10	full-splice_match	SLC2A13	ENST00000280871.8	7003	10	-222	3153	8	-3153	multi-exon	FALSE	canonical	1	55465	junction_9	11710.402891298967	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	274	2220	20.0	-5	True	AATAAA	-15
PB.7855.21	chr22	+	4802	10	novel_in_catalog	NUP50	novel	5233	8	NA	NA	0	-597	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	47734.50919873844	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	717	2039	90.0	48	False	NA	NA
PB.2546.1	chr12	-	7147	10	full-splice_match	SLC2A13	ENST00000280871.8	7003	10	-218	74	12	-74	multi-exon	FALSE	canonical	1	55465	junction_9	11710.402891298967	NA	3	NA	TRUE	NA	NA	NA	C	coding	648	1947	270	2216	45.0	-1	True	ATTAAA	-10
PB.8752.9	chr4	-	3379	16	novel_in_catalog	APBB2	novel	8972	18	NA	NA	0	-68	no_combination_of_known_junctions	FALSE	canonical	1	7153	junction_15	71224.689332843	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	472	2688	40.0	-1	True	ATTAAA	-5
PB.8752.8	chr4	-	3457	17	full-splice_match	APBB2	ENST00000506352.5	3316	17	75	-216	-8	-68	multi-exon	FALSE	canonical	1	53240	junction_10	63200.245679871325	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	553	2766	40.0	1	True	ATTAAA	-5
PB.8309.3	chr3	+	4124	10	full-splice_match	QTRT2	ENST00000281273.8	4023	10	26	-127	6	127	multi-exon	FALSE	canonical	1	49685	junction_2	47121.52795108033	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	232	1479	15.0	-19	True	AAAAAG	-39
PB.2546.8	chr12	-	2292	4	full-splice_match	SLC2A13	ENST00000380858.1	3082	4	12	778	12	-778	multi-exon	FALSE	canonical	1	55465	junction_3	14886.467971505755	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	270	1343	20.0	-1	True	ATTAAA	-27
PB.2546.9	chr12	-	3213	2	novel_not_in_catalog	SLC2A13	novel	7003	10	NA	NA	-14	-141082	any annotated donor/acceptor	FALSE	canonical	1	1791	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	296	964	50.0	-27	True	AATAAA	-23
PB.6887.1	chr2	+	1598	9	full-splice_match	NUP35	ENST00000295119.8	1633	9	38	-3	17	3	multi-exon	FALSE	canonical	1	111443	junction_2	56062.96605770604	NA	0	NA	TRUE	NA	NA	NA	A	coding	326	981	66	1046	15.0	0	True	AATAAA	-18
PB.3787.1	chr15	-	1654	3	full-splice_match	RHOV	ENST00000220507.4	1705	3	49	2	49	-2	multi-exon	FALSE	canonical	1	114734	junction_2	21026.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	236	711	102	812	10.0	-15	True	AATAAA	-15
PB.6590.4	chr2	-	2824	11	novel_not_in_catalog	RETSAT	novel	2335	8	NA	NA	149	-12	any annotated donor/acceptor	FALSE	canonical	1	2831	junction_4	152410.5523379533	NA	0	NA	TRUE	NA	NA	NA	B	coding	294	885	220	1104	35.0	266	False	AATAAA	-20
PB.9583.2	chr5	+	3588	19	novel_not_in_catalog	LARP1	novel	6595	19	NA	NA	-29923	940	any annotated donor/acceptor	FALSE	canonical	1	980	junction_6	374505.68860595726	NA	2	1	TRUE	NA	NA	NA	B	coding	861	2586	239	2824	80.0	0	True	NA	NA
PB.9337.51	chr5	-	2688	2	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-14	2511	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-11	True	NA	NA
PB.9583.1	chr5	+	3690	19	novel_not_in_catalog	LARP1	novel	6595	19	NA	NA	-29935	940	any annotated donor/acceptor	FALSE	canonical	1	16223	junction_1	320908.4545448454	NA	0	NA	TRUE	NA	NA	NA	B	coding	891	2676	251	2926	80.0	-12	True	NA	NA
PB.9583.6	chr5	+	3748	19	novel_in_catalog	LARP1	novel	6595	19	NA	NA	27	979	combination_of_known_junctions	FALSE	canonical	1	8664	junction_1	322098.98222329724	NA	1	NA	TRUE	NA	NA	NA	B	coding	891	2676	270	2945	85.0	-2	True	CATAAA	-6
PB.9583.4	chr5	+	3172	15	novel_not_in_catalog	LARP1	novel	6595	19	NA	NA	-212	940	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	362648.1719962327	NA	0	NA	TRUE	NA	NA	NA	B	coding	717	2154	255	2408	80.0	-14	True	NA	NA
PB.9337.50	chr5	-	1375	3	full-splice_match	MEF2C	ENST00000511086.1	689	3	-52	-634	1	634	multi-exon	FALSE	canonical	1	249116	junction_2	193080.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-11	True	AATAAA	-21
PB.9583.9	chr5	+	2648	15	novel_not_in_catalog	LARP1	novel	6595	19	NA	NA	-101	940	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	362648.1719962327	NA	1	NA	TRUE	NA	NA	NA	B	coding	717	2154	125	2278	80.0	-8322	False	NA	NA
PB.9337.53	chr5	-	3314	1	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	925	7105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	7483	False	CATAAA	-3
PB.9337.52	chr5	-	2075	1	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-169	-1426	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	9639	False	ATTAAA	-9
PB.2227.2	chr11	+	2034	3	full-splice_match	ANKRD49	ENST00000534911.1	760	3	0	-1274	0	-25	multi-exon	FALSE	canonical	1	13558	junction_2	36017.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	143	520	65.0	-19	True	NA	NA
PB.2227.3	chr11	+	2873	3	novel_in_catalog	ANKRD49	novel	2268	3	NA	NA	7	-25	combination_of_known_junctions	FALSE	canonical	1	48307	junction_2	18642.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	136	513	65.0	-12	True	NA	NA
PB.2227.1	chr11	+	1854	3	full-splice_match	ANKRD49	ENST00000544612.5	2268	3	355	59	0	-38	multi-exon	FALSE	canonical	1	46231	junction_2	19680.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	143	862	70.0	-19	True	NA	NA
PB.2227.6	chr11	+	2178	3	novel_in_catalog	ANKRD49	novel	2268	3	NA	NA	1	513	combination_of_known_junctions	FALSE	canonical	1	48307	junction_2	18642.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	122	499	10.0	2	True	TTTAAA	-8
PB.2227.7	chr11	+	2185	3	novel_in_catalog	ANKRD49	novel	2268	3	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	1	1632	junction_2	41980.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	117	494	60.0	7	True	AATAAA	-13
PB.2227.4	chr11	+	3006	2	full-splice_match	ANKRD49	ENST00000544253.1	3002	2	-4	0	0	0	multi-exon	FALSE	canonical	1	85592	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	123	500	45.0	1	True	AATAAA	-19
PB.2227.5	chr11	+	2056	3	novel_in_catalog	ANKRD49	novel	2268	3	NA	NA	0	390	combination_of_known_junctions	FALSE	canonical	1	48307	junction_2	18642.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	123	500	15.0	1	True	NA	NA
PB.7151.1	chr20	-	1509	5	novel_in_catalog	C20orf27	novel	933	3	NA	NA	8	-1	intron_retention	FALSE	canonical	1	515604	junction_4	110311.95306719939	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	198	770	15.0	1	True	AATAAA	-18
PB.9238.4	chr5	-	6099	1	novel_in_catalog	PLK2	novel	2960	14	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	104	315	3772	4086	30.0	0	True	AATAAA	-15
PB.10067.6	chr6	+	2493	14	incomplete-splice_match	SENP6	ENST00000447266.6	6501	24	-190	41045	-70	-1742	3prime_fragment	FALSE	canonical	1	56267	junction_5	149365.76600832748	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1824	669	2492	75.0	-23	True	NA	NA
PB.132.10	chr1	-	3316	23	novel_in_catalog	EMC1	novel	6664	23	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	1	15182	junction_3	118583.96710306512	NA	1	NA	TRUE	NA	NA	NA	C	coding	899	2700	22	2721	25.0	-7	True	NA	NA
PB.7151.2	chr20	-	1269	6	full-splice_match	C20orf27	ENST00000379772.3	1886	6	616	1	10	-1	multi-exon	FALSE	canonical	1	515604	junction_5	118706.9972640198	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	196	720	15.0	3	True	AATAAA	-18
PB.9859.2	chr6	+	1740	14	full-splice_match	GTF2H4	ENST00000259895.8	1735	14	0	-5	0	5	multi-exon	FALSE	canonical	1	236965	junction_7	58391.969111226164	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	224	1612	0.0	-23	True	AATAAA	-22
PB.12120.5	chrX	-	5405	9	novel_in_catalog	OPHN1	novel	7879	25	NA	NA	-109	-557	combination_of_known_junctions	FALSE	canonical	1	4669	junction_8	15386.426589286415	NA	1	NA	TRUE	NA	NA	NA	B	coding	304	915	220	1134	30.0	-57	False	NA	NA
PB.12120.6	chrX	-	4991	8	novel_in_catalog	OPHN1	novel	7879	25	NA	NA	-25	-563	no_combination_of_known_junctions	FALSE	canonical	1	4669	junction_7	18206.567331597682	NA	17	1	TRUE	NA	NA	NA	B	coding	196	591	136	726	35.0	-2	True	NA	NA
PB.12120.7	chrX	-	3863	9	novel_in_catalog	OPHN1	novel	7879	25	NA	NA	-53	-2043	combination_of_known_junctions	FALSE	canonical	1	4669	junction_8	15386.426589286415	NA	0	NA	TRUE	NA	NA	NA	B	coding	304	915	164	1078	45.0	-1	True	NA	NA
PB.12120.1	chrX	-	5836	8	novel_in_catalog	OPHN1	novel	7879	25	NA	NA	-27	-2	no_combination_of_known_junctions	FALSE	canonical	1	2763	junction_1	20311.333949702235	NA	2	NA	TRUE	NA	NA	NA	B	coding	295	888	138	1025	20.0	-4	True	AATAAA	-21
PB.12120.2	chrX	-	5569	8	novel_in_catalog	OPHN1	novel	7879	25	NA	NA	-42	-2	no_combination_of_known_junctions	FALSE	canonical	1	4669	junction_7	18206.567331597682	NA	1	NA	TRUE	NA	NA	NA	B	coding	196	591	153	743	20.0	10	False	AATAAA	-21
PB.12120.3	chrX	-	5904	9	novel_in_catalog	OPHN1	novel	7879	25	NA	NA	-54	-3	combination_of_known_junctions	FALSE	canonical	1	4669	junction_8	15386.426589286415	NA	0	NA	TRUE	NA	NA	NA	B	coding	304	915	165	1079	20.0	-2	True	AATAAA	-20
PB.11595.5	chr9	-	10128	7	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-5	-8	intron_retention	FALSE	canonical	1	100496	junction_6	24453.38416934011	NA	5	NA	TRUE	NA	NA	NA	C	coding	429	1290	27	1316	35.0	-12	True	AGTAAA	-13
PB.3302.24	chr14	-	3217	26	full-splice_match	SUPT16H	ENST00000216297.6	4684	26	248	1219	-5	869	multi-exon	FALSE	canonical	1	153336	junction_24	274844.71571066015	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3126	92	3217	60.0	0	True	NA	NA
PB.11595.7	chr9	-	4553	8	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-65	2940	combination_of_known_junctions	FALSE	canonical	1	35628	junction_1	45933.02846669757	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	87	1292	30.0	26	False	ATTAAA	-32
PB.10067.7	chr6	+	3581	15	full-splice_match	SENP6	ENST00000327284.12	2700	15	-67	-814	-67	-78	multi-exon	FALSE	canonical	1	103972	junction_5	122353.30318862817	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	666	2723	25.0	-20	True	AATAAA	-17
PB.8879.7	chr4	+	4815	26	novel_in_catalog	AC098582.1	novel	582	5	NA	NA	69456	58616	no_combination_of_known_junctions	FALSE	canonical	1	1595	junction_1	61017.952920103766	NA	7	NA	TRUE	NA	NA	NA	B	coding	1050	3153	160	3312	30.0	-105	False	ATTAAA	-15
PB.8879.6	chr4	+	4652	25	novel_in_catalog	AC098582.1	novel	582	5	NA	NA	68673	58688	no_combination_of_known_junctions	FALSE	canonical	1	3239	junction_2	61779.73585750642	NA	0	NA	TRUE	NA	NA	NA	B	coding	932	2799	279	3077	35.0	0	True	AATAAA	-17
PB.8879.5	chr4	+	2642	9	full-splice_match	HERC3	ENST00000407637.5	2634	9	-15	7	-3	-7	multi-exon	FALSE	canonical	1	123537	junction_2	46099.58056462526	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	182	1288	30.0	-2	True	AATAAA	-33
PB.8879.4	chr4	+	2388	10	novel_not_in_catalog	AC098582.1	novel	582	5	NA	NA	68636	7580	any annotated donor/acceptor	FALSE	canonical	1	1758	junction_9	67810.72212989461	NA	0	NA	TRUE	NA	NA	NA	B	coding	364	1095	217	1311	30.0	-37	True	AATAAA	-33
PB.8879.3	chr4	+	4832	25	novel_in_catalog	AC098582.1	novel	582	5	NA	NA	68653	58617	no_combination_of_known_junctions	FALSE	canonical	1	42871	junction_16	56279.20791557186	NA	1	NA	TRUE	NA	NA	NA	B	coding	1042	3129	200	3328	30.0	-20	True	ATTAAA	-16
PB.10030.2	chr6	-	2224	1	incomplete-splice_match	TRAM2	ENST00000182527.3	6908	11	77258	32	77258	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	7961	False	TTTAAA	-36
PB.8879.1	chr4	+	4929	26	full-splice_match	HERC3	ENST00000402738.5	4974	26	38	7	-23	-6	multi-exon	FALSE	canonical	1	100233	junction_16	51538.42253362437	NA	0	NA	TRUE	NA	NA	NA	C	coding	1050	3153	202	3354	35.0	-22	True	AATAAA	-17
PB.8397.8	chr3	+	3928	27	full-splice_match	ATP2C1	ENST00000505330.5	4888	27	0	960	0	848	multi-exon	FALSE	canonical	1	81268	junction_1	224764.1897892047	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	227	3088	45.0	-3	True	AATAAA	-30
PB.3696.1	chr14	+	3396	2	intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	100	303	1863	2165	95.0	-15	True	NA	NA
PB.9401.4	chr5	-	5013	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	103	-1359	-34	1359	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	279	953	85.0	0	True	NA	NA
PB.10030.3	chr6	-	4101	12	novel_not_in_catalog	TRAM2	novel	6908	11	NA	NA	-145	-3144	any annotated donor/acceptor	FALSE	canonical	1	6904	junction_9	110109.68561641367	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	449	1450	95.0	-1	True	NA	NA
PB.6940.13	chr2	-	2101	18	full-splice_match	ORC2	ENST00000234296.6	4312	18	-11	2222	-11	-741	multi-exon	FALSE	canonical	1	153047	junction_7	39296.53346298643	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	262	1995	40.0	9	False	ATTAAA	-14
PB.759.1	chr1	+	2407	2	full-splice_match	IVL	ENST00000368764.3	2153	2	-255	1	-255	-1	multi-exon	FALSE	canonical	1	121761	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	585	1758	320	2077	20.0	0	True	AATAAA	-22
PB.3606.1	chr14	-	2795	1	full-splice_match	AL121768.1	ENST00000613917.1	2544	1	-2195	1944	-2195	-1944	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.4038.2	chr15	+	3661	10	full-splice_match	WHAMM	ENST00000286760.5	5101	10	-1	1441	-1	-1441	multi-exon	FALSE	canonical	1	64315	junction_1	47665.539870131666	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	101	2530	55.0	-13	True	AATAAA	-25
PB.4038.3	chr15	+	3828	10	full-splice_match	WHAMM	ENST00000286760.5	5101	10	17	1256	17	-1256	multi-exon	FALSE	canonical	1	64315	junction_1	47665.539870131666	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	83	2512	45.0	5	True	AATAAA	-26
PB.215.2	chr1	+	2859	9	full-splice_match	STX12	ENST00000373943.8	3079	9	70	150	-2	-150	multi-exon	FALSE	canonical	1	277135	junction_1	69070.16076063526	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	56	886	20.0	34	True	AATAAA	-21
PB.4038.1	chr15	+	1688	7	incomplete-splice_match	WHAMM	ENST00000286760.5	5101	10	-44	9612	-44	-298	3prime_fragment	FALSE	canonical	1	64315	junction_1	43408.885394838486	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1545	144	1688	25.0	-124	False	AAGAAA	-39
PB.3302.28	chr14	-	2384	1	novel_in_catalog	SUPT16H	novel	4684	26	NA	NA	-6	1339	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.11873.5	chr9	-	3141	22	incomplete-splice_match	TSC1	ENST00000298552.8	8616	23	18	5886	0	-692	3prime_fragment	FALSE	canonical	1	95250	junction_9	37879.45074207838	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2925	217	3141	70.0	0	True	NA	NA
PB.4208.5	chr16	+	2467	12	novel_in_catalog	AC004224.2	novel	529	5	NA	NA	42964	20904	no_combination_of_known_junctions	FALSE	canonical	1	4856	junction_1	59548.3522609294	NA	0	NA	TRUE	NA	NA	NA	A	coding	402	1209	1062	2270	25.0	2	True	NA	NA
PB.4208.4	chr16	+	2562	12	full-splice_match	CLUAP1	ENST00000576634.5	4163	12	58	1543	0	-164	multi-exon	FALSE	canonical	1	124106	junction_1	31786.67207265563	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	87	1328	65.0	-22	True	NA	NA
PB.6871.3	chr2	-	1745	8	full-splice_match	PRKRA	ENST00000325748.8	1826	8	74	7	-6	-6	multi-exon	TRUE	canonical	1	450529	junction_3	61554.75994227433	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	128	1069	40.0	-16	True	AATAAA	-26
PB.3302.29	chr14	-	2219	1	novel_in_catalog	SUPT16H	novel	4684	26	NA	NA	-6	1174	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.4208.1	chr16	+	3031	12	full-splice_match	CLUAP1	ENST00000576634.5	4163	12	83	1049	0	330	multi-exon	FALSE	canonical	1	124106	junction_1	31786.67207265563	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	62	1303	100.0	3	True	NA	NA
PB.6871.4	chr2	-	1637	8	full-splice_match	PRKRA	ENST00000325748.8	1826	8	58	131	0	109	multi-exon	FALSE	canonical	1	450529	junction_3	61554.75994227433	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	144	1085	15.0	-32	True	ATTAAA	-21
PB.4208.3	chr16	+	1532	12	full-splice_match	CLUAP1	ENST00000576634.5	4163	12	51	2580	-1	-2	multi-exon	FALSE	canonical	1	124106	junction_1	31786.67207265563	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	94	1335	25.0	-29	True	NA	NA
PB.4208.2	chr16	+	1858	12	full-splice_match	CLUAP1	ENST00000576634.5	4163	12	81	2224	-2	-1	multi-exon	FALSE	canonical	1	124106	junction_1	31786.67207265563	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	64	1305	40.0	1	True	ATTAAA	-15
PB.1936.4	chr11	-	1854	12	novel_in_catalog	MTCH2	novel	581	6	NA	NA	50	-628	combination_of_known_junctions	FALSE	canonical	1	123750	junction_9	444655.1162631458	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	81	965	5.0	-18	True	NA	NA
PB.1936.5	chr11	-	1127	13	full-splice_match	MTCH2	ENST00000302503.7	2587	13	64	1396	36	-8	multi-exon	FALSE	canonical	1	1022651	junction_3	232864.903431913	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	95	1006	5.0	-32	True	NA	NA
PB.5247.11	chr17	-	1306	6	full-splice_match	GRB2	ENST00000316804.9	3248	6	-16	1958	12	307	multi-exon	FALSE	canonical	1	767465	junction_5	342016.14938093204	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	319	972	75.0	4	True	NA	NA
PB.1936.3	chr11	-	2501	12	novel_in_catalog	MTCH2	novel	581	6	NA	NA	32	0	combination_of_known_junctions	TRUE	canonical	1	123750	junction_9	444655.1162631458	NA	3	1	TRUE	NA	NA	NA	C	coding	294	885	99	983	10.0	-36	True	NA	NA
PB.11954.18	chrX	-	2567	3	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-13	-798	any annotated donor/acceptor	FALSE	canonical	1	158	junction_1	265.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	425	832	20.0	NA	False	NA	NA
PB.1936.1	chr11	-	2481	13	full-splice_match	MTCH2	ENST00000302503.7	2587	13	57	49	29	-49	multi-exon	FALSE	canonical	1	1022651	junction_3	232864.903431913	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	102	1013	35.0	-39	True	NA	NA
PB.11954.16	chrX	-	3962	7	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-40	-41	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	608.7286386852154	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	1819	2160	70.0	NA	False	NA	NA
PB.11954.17	chrX	-	3753	5	novel_in_catalog	BX890604.2	novel	3629	13	NA	NA	-23	-41	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_3	276.1425130254304	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	435	842	70.0	NA	False	NA	NA
PB.11954.14	chrX	-	2449	4	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-17	-18	any annotated donor/acceptor	FALSE	canonical	1	12	junction_1	290.9001355944835	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	429	836	85.0	NA	False	NA	NA
PB.11954.15	chrX	-	3323	3	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-25	-26	any annotated donor/acceptor	FALSE	canonical	1	32	junction_1	328.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	437	844	75.0	NA	False	NA	NA
PB.11954.12	chrX	-	2956	7	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-44	-18	any annotated donor/acceptor	FALSE	canonical	1	12	junction_1	592.9698324722955	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	456	863	85.0	NA	False	NA	NA
PB.11954.13	chrX	-	2874	7	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-23	-18	any annotated donor/acceptor	FALSE	canonical	1	12	junction_1	247.54775072476198	NA	3	NA	TRUE	NA	NA	NA	C	coding	135	408	435	842	85.0	NA	False	NA	NA
PB.11954.10	chrX	-	3437	3	novel_in_catalog	BX890604.2	novel	3629	13	NA	NA	-35	-18	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	344.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	447	854	85.0	NA	False	NA	NA
PB.11954.11	chrX	-	3328	3	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	6	-18	any annotated donor/acceptor	FALSE	canonical	1	158	junction_1	265.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	406	813	85.0	NA	False	NA	NA
PB.411.4	chr1	-	5696	30	full-splice_match	TUT4	ENST00000371544.7	5858	30	8	154	-7	-26	multi-exon	FALSE	canonical	1	33138	junction_5	58861.532194954736	NA	0	NA	TRUE	NA	NA	NA	C	coding	1644	4935	256	5190	80.0	-1	True	TTTAAA	-5
PB.7312.16	chr20	+	6389	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-3	-2	any annotated donor/acceptor	TRUE	canonical	1	11114	junction_2	176299.9361243632	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	184	1608	45.0	0	True	AATAAA	-24
PB.411.7	chr1	-	5080	25	incomplete-splice_match	TUT4	ENST00000371544.7	5858	30	8	14058	-7	-4244	3prime_fragment	FALSE	canonical	1	119235	junction_24	41517.19679189092	NA	0	NA	TRUE	NA	NA	NA	C	coding	1322	3969	256	4224	25.0	-1	True	AATAAA	-26
PB.411.1	chr1	-	5759	30	novel_not_in_catalog	TUT4	novel	553	3	NA	NA	3	-3	intron_retention	FALSE	canonical	1	13888	junction_21	61387.9451089089	NA	0	NA	TRUE	NA	NA	NA	C	coding	1613	4842	261	5102	25.0	-6	True	AATAAA	-18
PB.411.2	chr1	-	5863	31	novel_not_in_catalog	TUT4	novel	553	3	NA	NA	-5	-5	intron_retention	TRUE	non_canonical	0	0	junction_30	61725.50841016485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1640	4923	286	5208	25.0	-1	True	AATAAA	-16
PB.10533.7	chr7	-	3877	8	novel_not_in_catalog	TBRG4	novel	2243	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	66680	junction_3	279246.4095599484	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	119	1099	10.0	-14	True	NA	NA
PB.411.8	chr1	-	2421	13	incomplete-splice_match	TUT4	ENST00000371544.7	5858	30	8	52118	-7	2345	3prime_fragment	FALSE	canonical	1	119235	junction_12	44443.696614055654	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2166	256	2421	60.0	-1	True	NA	NA
PB.7312.14	chr20	+	5372	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-1	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	56	1519	40.0	2	True	AATAAA	-40
PB.290.18	chr1	+	1346	6	incomplete-splice_match	THRAP3	ENST00000648638.1	3825	14	15	16236	15	-5048	3prime_fragment	FALSE	canonical	1	25841	junction_2	292905.7813532536	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1101	245	1345	75.0	-6	True	NA	NA
PB.8627.8	chr3	+	4283	16	novel_not_in_catalog	PAK2	novel	6139	15	NA	NA	27	-1948	any annotated donor/acceptor	FALSE	canonical	1	1394	junction_1	129742.12698162287	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	415	1989	15.0	-17	True	ATTAAA	-22
PB.8627.9	chr3	+	2917	16	novel_not_in_catalog	PAK2	novel	6139	15	NA	NA	44	921	any annotated donor/acceptor	FALSE	canonical	1	1394	junction_1	129742.12698162287	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	398	1972	10.0	0	True	AATAAA	-22
PB.7312.15	chr20	+	4593	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-3	-897	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	58	1521	75.0	0	True	NA	NA
PB.7312.12	chr20	+	6307	11	full-splice_match	STK4	ENST00000372806.7	6342	11	33	2	-8	-2	multi-exon	FALSE	canonical	1	259752	junction_1	96041.26906288776	NA	6	NA	TRUE	NA	NA	NA	C	coding	487	1464	63	1526	45.0	-5	True	AATAAA	-24
PB.8627.2	chr3	+	3557	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	44	2538	44	1680	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	279	1853	30.0	0	True	AATAAA	-26
PB.8627.3	chr3	+	4140	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	51	1948	51	-1948	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	272	1846	15.0	7	True	ATTAAA	-22
PB.8627.4	chr3	+	5825	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	152	162	152	-162	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	171	1745	20.0	-47	False	AATAAA	-11
PB.7683.1	chr22	-	1794	7	full-splice_match	RHBDD3	ENST00000216085.11	1794	7	-2	2	-2	-2	multi-exon	FALSE	canonical	1	52806	junction_4	85871.74640448134	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	428	1588	15.0	0	True	AATAAA	-37
PB.8627.6	chr3	+	2828	15	full-splice_match	PAK2	ENST00000327134.7	6139	15	15	3296	15	922	multi-exon	FALSE	canonical	1	95494	junction_2	107374.27896809536	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	308	1882	10.0	-29	True	AATAAA	-23
PB.7312.13	chr20	+	3728	1	novel_in_catalog	STK4	novel	6342	11	NA	NA	-6	-2684	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	102	309	2501	2809	90.0	-3	True	NA	NA
PB.95.2	chr1	+	5169	5	full-splice_match	AGTRAP	ENST00000314340.9	1107	5	-26	-4036	-1	-1	multi-exon	FALSE	canonical	1	411419	junction_2	206500.8328034054	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	81	560	30.0	-7	True	NA	NA
PB.95.1	chr1	+	2750	4	novel_in_catalog	AGTRAP	novel	1067	4	NA	NA	0	3	intron_retention	FALSE	canonical	1	547316	junction_3	182722.10865379396	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	1860	2174	20.0	-1418	False	ATTAAA	-17
PB.7683.7	chr22	-	2545	3	full-splice_match	RHBDD3	ENST00000493894.1	999	3	-20	-1526	-2	448	multi-exon	FALSE	canonical	1	227752	junction_2	33259.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	1679	2431	80.0	0	True	NA	NA
PB.10533.1	chr7	-	4740	9	full-splice_match	TBRG4	ENST00000361278.7	1917	9	-5	-2818	-5	2818	multi-exon	FALSE	canonical	1	66594	junction_6	261325.02473569073	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	132	1697	15.0	-27	True	NA	NA
PB.7049.3	chr2	+	3041	1	novel_in_catalog	MFF	novel	581	4	NA	NA	-2	-2394	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	153	462	3	464	100.0	-13	True	NA	NA
PB.7683.6	chr22	-	3893	3	full-splice_match	RHBDD3	ENST00000493894.1	999	3	-19	-2875	-1	-1348	multi-exon	FALSE	canonical	1	227752	junction_2	33259.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	1678	2430	100.0	1	True	NA	NA
PB.6865.1	chr2	-	2913	1	novel_in_catalog	NFE2L2	novel	2749	8	NA	NA	6	-155900	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	8	27	293	319	100.0	-1	True	NA	NA
PB.6754.4	chr2	+	1706	17	incomplete-splice_match	RAB3GAP1	ENST00000442034.5	4185	25	-14	34298	-14	4986	3prime_fragment	FALSE	canonical	1	260691	junction_1	65413.5679064068	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	25	1704	70.0	-9	True	NA	NA
PB.8163.1	chr3	+	2249	10	full-splice_match	PPM1M	ENST00000323588.8	2193	10	-54	-2	-54	0	multi-exon	FALSE	canonical	1	79336	junction_1	63352.905069660635	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	87	1466	25.0	-20	True	ATTAAA	-15
PB.12049.10	chrX	+	2719	22	novel_not_in_catalog	USP11	novel	3515	21	NA	NA	-25	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	287523.93979731743	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	628	2700	85.0	-4766	False	NA	NA
PB.12049.11	chrX	+	3079	21	novel_in_catalog	USP11	novel	3515	21	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	1	5198	junction_1	230909.80224624506	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	610	2682	15.0	0	True	TATAAA	-18
PB.9321.1	chr5	-	1612	3	full-splice_match	AC008771.1	ENST00000504300.1	837	3	93	-868	-17	449	multi-exon	FALSE	canonical	1	50529	junction_2	3915.0	NA	9	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-25	True	NA	NA
PB.518.2	chr1	+	1459	5	full-splice_match	LMO4	ENST00000370544.9	5405	5	406	3540	-225	-25	multi-exon	FALSE	canonical	1	405704	junction_1	392088.8141802186	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	375	872	80.0	-8	True	NA	NA
PB.6754.6	chr2	+	4894	24	full-splice_match	RAB3GAP1	ENST00000264158.12	4914	24	21	-1	-12	1	multi-exon	FALSE	canonical	1	260691	junction_1	91662.69893135355	NA	1	1	TRUE	NA	NA	NA	C	coding	981	2946	23	2968	25.0	-7	True	AATAAA	-15
PB.10342.1	chr6	-	2088	1	full-splice_match	TCTE3	ENST00000628156.1	2078	1	-9	-1	-9	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-25	True	AATAAA	-20
PB.6754.9	chr2	+	3176	25	novel_in_catalog	RAB3GAP1	novel	4914	24	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	1	20956	junction_24	118497.31887068134	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	22	2961	85.0	-6	True	AATAGA	-26
PB.130.12	chr1	-	10147	68	incomplete-splice_match	UBR4	ENST00000375254.7	15906	106	-18	46723	-18	-16	3prime_fragment	TRUE	canonical	1	183116	junction_57	70379.15394458713	NA	0	NA	TRUE	NA	NA	NA	B	coding	3367	10101	47	10147	70.0	3	True	NA	NA
PB.10929.2	chr7	+	2296	10	incomplete-splice_match	NOS3	ENST00000297494.7	4388	27	17911	-353	-31	353	5prime_fragment	FALSE	canonical	1	39383	junction_3	16373.937559728158	NA	0	NA	TRUE	NA	NA	NA	B	coding	446	1341	184	1524	15.0	3	True	TATAAA	-19
PB.10533.8	chr7	-	2880	10	novel_in_catalog	TBRG4	novel	2243	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	583406	junction_9	122488.91981131685	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	106	1263	10.0	-1	True	NA	NA
PB.130.16	chr1	-	2686	2	novel_not_in_catalog	UBR4	novel	15906	106	NA	NA	-18	-54731	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	coding	119	360	47	406	75.0	3	True	NA	NA
PB.10828.30	chr7	+	3275	7	novel_not_in_catalog	CALU	novel	3210	6	NA	NA	8	0	intron_retention	FALSE	canonical	1	736	junction_1	1157361.0474734704	NA	16	1	TRUE	NA	NA	NA	C	coding	315	948	919	1866	90.0	0	True	NA	NA
PB.10533.9	chr7	-	2472	10	novel_not_in_catalog	TBRG4	novel	2243	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	24548	junction_7	259833.61662717076	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	932	1798	10.0	-1	True	NA	NA
PB.10828.33	chr7	+	2571	7	novel_not_in_catalog	CALU	novel	3210	6	NA	NA	5255	0	any annotated donor/acceptor	FALSE	canonical	1	39	junction_1	929667.5398231378	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	158	1162	90.0	-9726	False	NA	NA
PB.1152.13	chr1	-	2641	15	novel_not_in_catalog	WDR26	novel	7367	14	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	325628.5180164614	NA	1	NA	TRUE	NA	NA	NA	B	coding	497	1494	448	1941	30.0	-1	True	AATAAA	-21
PB.10775.30	chr7	-	2879	8	full-splice_match	NAMPT	ENST00000354289.8	1213	8	-62	-1604	-32	1604	multi-exon	FALSE	canonical	1	10833	junction_4	658223.9570568296	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	100	1206	95.0	-1	True	NA	NA
PB.10775.31	chr7	-	3694	4	full-splice_match	NAMPT	ENST00000486949.5	1115	4	-111	-2468	-47	-242	multi-exon	FALSE	canonical	1	115611	junction_2	790700.5203110861	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	115	603	75.0	-16	True	NA	NA
PB.8397.9	chr3	+	3169	28	full-splice_match	ATP2C1	ENST00000507488.6	3579	28	168	242	-14	-227	multi-exon	FALSE	canonical	1	81268	junction_1	253599.69699499517	NA	0	NA	TRUE	NA	NA	NA	C	coding	973	2922	53	2974	50.0	0	True	TATAAA	-16
PB.7049.1	chr2	+	1938	9	full-splice_match	MFF	ENST00000304593.13	2004	9	67	-1	2	1	multi-exon	FALSE	canonical	1	217259	junction_2	143744.11668955142	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	345	1220	20.0	-32	True	AATAAA	-18
PB.44.1	chr1	-	2643	7	full-splice_match	LRRC47	ENST00000378251.2	4310	7	5	1662	5	915	multi-exon	FALSE	canonical	1	459306	junction_6	65355.850904660576	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	24	1775	25.0	-6	True	NA	NA
PB.7194.1	chr20	+	1361	6	full-splice_match	DTD1	ENST00000377452.3	1387	6	18	8	18	-8	multi-exon	FALSE	canonical	1	491616	junction_1	121054.30592655514	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	163	792	30.0	-5854	False	AATAAA	-41
PB.7194.2	chr20	+	2825	5	full-splice_match	DTD1	ENST00000494921.2	2890	5	62	3	62	-3	multi-exon	FALSE	canonical	1	9777	junction_4	294271.19588431943	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	48	689	50.0	-5739	False	ATTAAA	-20
PB.10929.1	chr7	+	3025	10	incomplete-splice_match	NOS3	ENST00000297494.7	4388	27	17895	-1066	16	1066	5prime_fragment	TRUE	canonical	1	39383	junction_3	16373.937559728158	NA	0	NA	TRUE	NA	NA	NA	B	coding	446	1341	200	1540	10.0	-5103	False	ACTAAA	-38
PB.8257.14	chr3	+	1912	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	8	-34	-2	3	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	282	1277	15.0	1	True	NA	NA
PB.3132.1	chr13	+	6521	30	novel_not_in_catalog	DGKH	novel	4202	30	NA	NA	-718	2343	any annotated donor/acceptor	FALSE	canonical	1	10406	junction_1	8999.21355316704	NA	3	NA	TRUE	NA	NA	NA	A	coding	1164	3495	80	3574	70.0	-3	True	CATAAA	-33
PB.6768.3	chr2	-	3516	9	novel_not_in_catalog	ZEB2	novel	1414	2	NA	NA	0	6	intron_retention	FALSE	non_canonical	0	0	junction_1	104242.98560926953	NA	3	1	TRUE	NA	NA	NA	C	coding	796	2391	251	2641	25.0	-1	True	AATAAA	-23
PB.9610.11	chr5	-	3036	7	full-splice_match	PANK3	ENST00000239231.6	10506	7	185	7285	-65	1831	multi-exon	FALSE	canonical	1	73904	junction_5	72798.59793159175	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	133	1245	35.0	-1	True	AATAAA	-20
PB.9610.10	chr5	-	3186	7	full-splice_match	PANK3	ENST00000239231.6	10506	7	190	7130	-60	1986	multi-exon	FALSE	canonical	1	73904	junction_5	72798.59793159175	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	128	1240	30.0	199	False	NA	NA
PB.9610.12	chr5	-	1828	7	full-splice_match	PANK3	ENST00000239231.6	10506	7	218	8460	-32	656	multi-exon	FALSE	canonical	1	73904	junction_5	72798.59793159175	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	100	1212	35.0	-24	True	ATTAAA	-20
PB.6637.1	chr2	+	2594	6	novel_in_catalog	ARID5A	novel	876	4	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	180394	junction_2	130169.33012564825	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	978	2270	10.0	4	True	AATAAA	-24
PB.6309.12	chr2	+	3341	9	novel_in_catalog	RRM2	novel	3431	11	NA	NA	1	-5	intron_retention	FALSE	canonical	1	256426	junction_3	299596.3942068302	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	421	1314	30.0	1	True	AATAAA	-15
PB.10748.1	chr7	+	2234	9	novel_in_catalog	SH2B2	novel	490	5	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	94220.26494337617	NA	2	NA	TRUE	NA	NA	NA	A	coding	632	1899	256	2154	5.0	-10	True	ATTAAA	-20
PB.89.2	chr1	-	3363	23	novel_in_catalog	EXOSC10	novel	2721	24	NA	NA	1	-2	intron_retention	FALSE	canonical	1	361621	junction_22	146744.25061740735	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	38	2077	30.0	-18	True	ATTAAA	-12
PB.89.3	chr1	-	3005	24	novel_in_catalog	EXOSC10	novel	2721	24	NA	NA	0	-2	intron_retention	FALSE	canonical	1	361621	junction_23	144753.5986970895	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	39	1628	30.0	-19	True	ATTAAA	-12
PB.89.4	chr1	-	4235	21	novel_in_catalog	EXOSC10	novel	2721	24	NA	NA	3	-3	intron_retention	FALSE	canonical	1	361621	junction_20	151817.30254137702	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	21	1610	35.0	-1	True	ATTAAA	-11
PB.6637.3	chr2	+	2050	6	full-splice_match	ARID5A	ENST00000412735.5	2038	6	-9	-3	0	-1	multi-exon	FALSE	canonical	1	105151	junction_2	143086.6125324099	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	438	1730	15.0	-664	False	AATAAA	-20
PB.89.6	chr1	-	2881	25	novel_not_in_catalog	EXOSC10	novel	2721	24	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	3470	junction_4	186003.6388769645	NA	1	NA	TRUE	NA	NA	NA	C	coding	803	2412	38	2449	35.0	-18	True	ATTAAA	-11
PB.89.7	chr1	-	2697	24	full-splice_match	EXOSC10	ENST00000304457.11	2721	24	18	6	3	-3	multi-exon	FALSE	canonical	1	5035	junction_6	197076.47699510338	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	21	2603	35.0	-1	True	ATTAAA	-11
PB.6699.4	chr2	-	2541	9	full-splice_match	CKAP2L	ENST00000302450.10	4533	9	49	1943	-10	-683	multi-exon	FALSE	canonical	1	107813	junction_2	24534.38543147148	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	31	2268	25.0	-20	True	GATAAA	-12
PB.6637.2	chr2	+	2510	6	novel_not_in_catalog	ARID5A	novel	876	4	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_4	172621.06441289253	NA	3	1	TRUE	NA	NA	NA	C	coding	430	1293	898	2190	15.0	-674	False	AATAAA	-20
PB.11773.2	chr9	-	3406	17	novel_in_catalog	RC3H2	novel	9248	20	NA	NA	3	-14	intron_retention	FALSE	canonical	1	20439	junction_5	75055.56351120399	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	297	3320	45.0	7973	False	AATAAA	-21
PB.6637.5	chr2	+	2424	5	full-splice_match	ARID5A	ENST00000467498.5	940	5	-16	-1468	-1	-1	multi-exon	FALSE	canonical	1	105151	junction_2	159090.27533035292	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	476	2104	15.0	-1	True	AATAAA	-20
PB.8914.4	chr4	-	2251	7	novel_in_catalog	INTS12	novel	1927	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	20085	junction_6	95915.47014501304	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	760	2148	25.0	-4	True	AATAAA	-14
PB.6637.4	chr2	+	2324	8	novel_not_in_catalog	ARID5A	novel	876	4	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	329	junction_1	166640.80313521964	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	195	2009	25.0	-3	True	AATAAA	-15
PB.2320.1	chr11	+	3883	10	novel_in_catalog	NLRX1	novel	533	4	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	24444	junction_1	46584.95885085445	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	380	3307	10.0	-13	True	ATTAAA	-21
PB.2320.2	chr11	+	3734	10	full-splice_match	NLRX1	ENST00000409991.5	3716	10	-16	-2	-1	0	multi-exon	FALSE	canonical	1	12678	junction_1	49220.724315056206	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	232	3159	15.0	-13	True	ATTAAA	-20
PB.2320.3	chr11	+	3663	9	novel_in_catalog	NLRX1	novel	533	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10511	junction_2	62244.897119663554	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	695	3088	15.0	-12	True	ATTAAA	-20
PB.2320.4	chr11	+	3170	10	novel_in_catalog	NLRX1	novel	533	4	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	1	18393	junction_9	55413.76394090881	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	370	3135	10.0	-3	True	ATTAAA	-21
PB.2320.5	chr11	+	4129	10	full-splice_match	NLRX1	ENST00000409109.5	4092	10	-39	2	-3	0	multi-exon	FALSE	canonical	1	19523	junction_1	47670.177376543405	NA	1	NA	TRUE	NA	NA	NA	C	coding	975	2928	627	3554	15.0	0	True	ATTAAA	-20
PB.2320.6	chr11	+	3771	9	incomplete-splice_match	NLRX1	ENST00000409109.5	4092	10	-37	1130	-1	-1126	3prime_fragment	FALSE	canonical	1	19523	junction_1	49383.144239551766	NA	1	NA	TRUE	NA	NA	NA	C	coding	869	2610	625	3234	90.0	2	True	NA	NA
PB.2320.7	chr11	+	3732	10	full-splice_match	NLRX1	ENST00000292199.6	3744	10	12	0	-1	0	multi-exon	FALSE	canonical	1	3333	junction_1	51407.453756516625	NA	1	NA	TRUE	NA	NA	NA	C	coding	975	2928	230	3157	15.0	16	False	ATTAAA	-20
PB.2320.8	chr11	+	3444	9	novel_in_catalog	NLRX1	novel	533	4	NA	NA	30	-1126	combination_of_known_junctions	FALSE	canonical	1	24444	junction_1	48157.331240295076	NA	1	NA	TRUE	NA	NA	NA	C	coding	869	2610	298	2907	90.0	69	False	NA	NA
PB.6309.14	chr2	+	1892	9	incomplete-splice_match	RRM2	ENST00000304567.9	3271	10	10	1448	1	657	intron_retention	FALSE	canonical	1	256426	junction_4	268999.41190723353	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	60	1145	30.0	1	True	ATTAAA	-19
PB.9571.6	chr5	-	2660	26	full-splice_match	ANXA6	ENST00000354546.9	2593	26	35	-102	35	102	multi-exon	FALSE	canonical	1	1653387	junction_6	635394.5734788184	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	194	2215	30.0	-69	False	AGTAAA	-18
PB.8442.2	chr3	-	4525	17	full-splice_match	GK5	ENST00000480757.5	4479	17	-53	7	6	3	multi-exon	FALSE	canonical	1	12646	junction_7	37994.64868652558	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	2067	2819	25.0	-17	True	ATTAAA	-15
PB.1995.31	chr11	-	3518	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	668722.8516834335	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	34	2868	25.0	6669	False	NA	NA
PB.1995.30	chr11	-	3664	25	full-splice_match	GANAB	ENST00000346178.8	3906	25	10	232	1	1	multi-exon	FALSE	canonical	1	348424	junction_20	723601.7702048137	NA	1	1	TRUE	NA	NA	NA	C	coding	966	2901	7	2907	20.0	7	True	NA	NA
PB.6638.2	chr2	-	5181	21	novel_not_in_catalog	KANSL3	novel	5253	21	NA	NA	-3	-26	any annotated donor/acceptor	TRUE	canonical	1	708	junction_19	85923.13090459112	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	395	2770	65.0	-16	True	NA	NA
PB.12069.1	chrX	-	1740	4	full-splice_match	SLC35A2	ENST00000445167.7	1739	4	0	-1	0	1	multi-exon	FALSE	canonical	1	76700	junction_1	88399.26186092029	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	34	762	15.0	7875	False	AATAAA	-19
PB.12069.2	chrX	-	3235	3	full-splice_match	SLC35A2	ENST00000376512.2	903	3	9	-2341	1	-1	multi-exon	FALSE	canonical	1	205293	junction_2	43288.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1071	2123	15.0	7876	False	AATAAA	-16
PB.12069.3	chrX	-	2305	4	full-splice_match	SLC35A2	ENST00000376521.6	3047	4	311	431	-1	-1	multi-exon	FALSE	canonical	1	205293	junction_3	35367.66095680566	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	12	1193	15.0	-2	True	AATAAA	-16
PB.8629.17	chr3	-	1353	4	full-splice_match	NCBP2	ENST00000321256.9	2169	4	37	779	0	591	multi-exon	FALSE	canonical	1	539606	junction_3	251892.0439037327	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	58	528	50.0	-35	True	NA	NA
PB.11499.6	chr9	-	1914	12	full-splice_match	SMU1	ENST00000397149.3	7122	12	-48	5256	-48	-5256	multi-exon	FALSE	canonical	1	110256	junction_7	184835.58098487565	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	100	1641	40.0	23	False	NA	NA
PB.6638.1	chr2	-	5138	21	full-splice_match	KANSL3	ENST00000431828.5	5153	21	-15	30	0	-28	multi-exon	FALSE	canonical	1	75973	junction_20	74266.82905609677	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2637	93	2729	75.0	-13	True	NA	NA
PB.8408.19	chr3	-	3843	21	incomplete-splice_match	TOPBP1	ENST00000260810.9	5378	28	-31	17552	-31	8	3prime_fragment	FALSE	canonical	1	109338	junction_20	82273.43377549037	NA	1	NA	TRUE	NA	NA	NA	C	coding	1215	3648	164	3811	50.0	-4	True	AATAAA	-26
PB.572.3	chr1	-	3646	1	novel_in_catalog	DPH5	novel	1784	8	NA	NA	0	2800	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	8	True	AATAAA	-13
PB.5602.1	chr19	-	2028	4	full-splice_match	ZNF77	ENST00000314531.4	2002	4	-27	1	11	-1	multi-exon	FALSE	canonical	1	28236	junction_1	7565.089160082649	NA	0	NA	TRUE	NA	NA	NA	A	coding	545	1638	121	1758	30.0	-42	True	AATAAA	-22
PB.7049.5	chr2	+	1516	11	full-splice_match	MFF	ENST00000353339.7	2186	11	17	653	-1	-1	multi-exon	FALSE	canonical	1	52067	junction_3	203267.19615678274	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	425	1453	5.0	-12	True	TATAAA	-15
PB.8315.8	chr3	+	5948	13	novel_not_in_catalog	ARHGAP31	novel	9317	12	NA	NA	315	-2996	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	27046.269348793743	NA	5	NA	TRUE	NA	NA	NA	C	coding	1444	4335	160	4494	35.0	50	True	AATAAA	-21
PB.6638.4	chr2	-	5228	22	novel_not_in_catalog	KANSL3	novel	5253	21	NA	NA	-2	-27	any annotated donor/acceptor	FALSE	canonical	1	13894	junction_2	99539.42936941223	NA	15	2	TRUE	NA	NA	NA	C	coding	877	2634	102	2735	70.0	40	False	NA	NA
PB.8435.12	chr3	+	3097	2	incomplete-splice_match	ZBTB38	ENST00000507722.5	593	4	-63	52905	-63	2	3prime_fragment	FALSE	canonical	1	17194	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-4722	False	ATTAAA	-16
PB.6638.5	chr2	-	4955	20	novel_in_catalog	KANSL3	novel	5253	21	NA	NA	-2	-27	no_combination_of_known_junctions	FALSE	canonical	1	2028	junction_18	85083.38538772427	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	80	2545	70.0	0	True	NA	NA
PB.11240.1	chr8	-	3132	13	novel_in_catalog	RAD54B	novel	3068	15	NA	NA	31026	0	no_combination_of_known_junctions	FALSE	canonical	1	5484	junction_12	27651.40575226491	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	770	2923	35.0	-53	False	AATAAA	-20
PB.2480.1	chr12	+	2299	4	full-splice_match	GPRC5A	ENST00000014914.5	7362	4	780	4283	3	243	multi-exon	FALSE	canonical	1	365082	junction_1	97178.98538721676	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	111	1184	35.0	-3	True	AATAAA	-35
PB.7636.2	chr22	-	1365	5	full-splice_match	YDJC	ENST00000415762.6	1410	5	42	3	-8	-3	multi-exon	TRUE	canonical	1	178920	junction_3	42561.55255259728	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	713	1039	25.0	-1	True	AATAAA	-17
PB.7636.1	chr22	-	4256	1	genic	YDJC	novel	NA	NA	NA	NA	8	2288	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	108	327	1313	1639	100.0	-35	True	NA	NA
PB.2480.2	chr12	+	6576	4	full-splice_match	GPRC5A	ENST00000014914.5	7362	4	780	6	3	-6	multi-exon	FALSE	canonical	1	365082	junction_1	97178.98538721676	NA	4	NA	TRUE	NA	NA	NA	C	coding	357	1074	111	1184	35.0	-3	True	AATAAA	-9
PB.5731.1	chr19	-	2427	4	full-splice_match	ZNF823	ENST00000341191.10	2423	4	-3	-1	-3	1	multi-exon	FALSE	canonical	1	35343	junction_3	9044.09534816317	NA	0	NA	TRUE	NA	NA	NA	A	coding	610	1833	158	1990	15.0	-42	True	ATTAAA	-19
PB.4246.13	chr16	+	6849	24	novel_not_in_catalog	CLEC16A	novel	6891	24	NA	NA	-13	-20	any annotated donor/acceptor	TRUE	canonical	1	219	junction_22	47558.96208415128	NA	8	1	TRUE	NA	NA	NA	C	coding	1075	3228	151	3378	70.0	4	True	AATGAA	-33
PB.4246.12	chr16	+	2934	22	novel_in_catalog	CLEC16A	novel	6891	24	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	1	648	junction_21	43746.30829537417	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	153	2801	15.0	2	True	AATAAA	-14
PB.4246.11	chr16	+	3379	21	full-splice_match	CLEC16A	ENST00000409552.4	3365	21	-15	1	-15	-1	multi-exon	FALSE	canonical	1	78157	junction_10	28894.25106188946	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	153	2873	30.0	2	True	AGTAAA	-16
PB.4246.10	chr16	+	3840	22	novel_not_in_catalog	CLEC16A	novel	6891	24	NA	NA	-15	889	any annotated donor/acceptor	FALSE	canonical	1	705	junction_21	42311.198329218016	NA	3	NA	TRUE	NA	NA	NA	C	coding	868	2607	153	2759	5.0	2	True	NA	NA
PB.559.2	chr1	+	1580	8	novel_in_catalog	SNX7	novel	1589	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	28088	junction_7	64078.37240633456	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	11	1213	20.0	-1	True	AATAAA	-13
PB.7994.21	chr3	+	1979	3	full-splice_match	STT3B	ENST00000488151.1	436	3	32	-1575	32	-2	multi-exon	FALSE	canonical	1	1575490	junction_2	58480.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	100	423	30.0	NA	False	AATAAA	-21
PB.5530.1	chr18	-	3939	6	novel_not_in_catalog	ZNF516	novel	8118	7	NA	NA	-733	-3	any annotated donor/acceptor	FALSE	canonical	1	19805	junction_5	37773.61602812206	NA	1	NA	TRUE	NA	NA	NA	B	coding	1155	3468	248	3715	50.0	-2	True	AATAAA	-20
PB.11499.8	chr9	-	3128	9	incomplete-splice_match	SMU1	ENST00000397149.3	7122	12	-34	12428	-34	-12428	3prime_fragment	FALSE	canonical	1	110256	junction_4	209935.96738317466	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	86	1303	95.0	-23	True	NA	NA
PB.10037.1	chr6	-	2710	8	full-splice_match	ELOVL5	ENST00000304434.10	2827	8	22	95	-12	-95	multi-exon	FALSE	canonical	1	621633	junction_7	357226.5216275556	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	178	1077	30.0	-1	True	AATACA	-16
PB.8435.14	chr3	+	3133	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	-5	480	combination_of_known_junctions	FALSE	canonical	1	14260	junction_3	39579.10035849097	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2784	350	3133	65.0	-6	True	AAAAAG	-16
PB.10037.7	chr6	-	2844	9	full-splice_match	ELOVL5	ENST00000370918.8	3081	9	229	8	0	-7	multi-exon	FALSE	canonical	1	3731	junction_6	605428.216319243	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	143	1123	15.0	-1	True	ATTAAA	-12
PB.10037.6	chr6	-	3071	8	novel_not_in_catalog	ELOVL5	novel	3081	9	NA	NA	135	-7	any annotated donor/acceptor	FALSE	canonical	1	12360	junction_7	532476.2065298393	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	607	1350	15.0	193	False	ATTAAA	-12
PB.10037.4	chr6	-	2700	7	full-splice_match	ELOVL5	ENST00000542638.5	2875	7	174	1	2	0	multi-exon	FALSE	canonical	1	34294	junction_2	587099.4508716607	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	198	986	15.0	-21	False	ATTAAA	-19
PB.6931.5	chr2	+	2810	3	novel_not_in_catalog	C2orf69	novel	3728	2	NA	NA	5	-966	any annotated donor/acceptor	FALSE	canonical	1	382	junction_1	145.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	580	1389	95.0	18	True	AATGAA	-32
PB.6906.1	chr2	-	3627	9	full-splice_match	NEMP2	ENST00000409150.7	6168	9	-5	2546	-5	-2546	multi-exon	FALSE	canonical	1	26730	junction_8	15883.09584068468	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	73	1326	10.0	-7	True	AATAAA	-22
PB.9022.10	chr4	-	5369	29	novel_in_catalog	LRBA	novel	10032	57	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	1	2753	junction_1	60078.55072035412	NA	0	NA	TRUE	NA	NA	NA	B	coding	1557	4674	292	4965	25.0	10	True	NA	NA
PB.9022.11	chr4	-	3085	23	incomplete-splice_match	LRBA	ENST00000507224.5	8826	51	-6	538203	1	-12386	3prime_fragment	FALSE	canonical	1	133877	junction_19	39560.43664610093	NA	1	NA	TRUE	NA	NA	NA	B	coding	928	2784	302	3085	50.0	0	True	AATACA	-2
PB.8840.7	chr4	+	2411	8	novel_in_catalog	CCNG2	novel	5526	8	NA	NA	6	1026	combination_of_known_junctions	FALSE	canonical	1	20238	junction_1	187994.24565010236	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	91	1125	15.0	-35	True	AATAAA	-18
PB.524.5	chr1	-	1785	10	incomplete-splice_match	GBP2	ENST00000370466.3	2220	11	0	1820	0	367	3prime_fragment	FALSE	canonical	1	422522	junction_5	179661.14122411283	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1515	270	1784	65.0	-30	True	TATAAA	-39
PB.8585.3	chr3	-	2579	8	full-splice_match	TBCCD1	ENST00000424280.5	3058	8	211	268	-14	0	multi-exon	FALSE	canonical	1	12925	junction_7	31971.330298585082	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	270	1943	30.0	-15	False	ATTAAA	-21
PB.8009.4	chr3	-	3828	1	full-splice_match	EPM2AIP1	ENST00000322716.7	8126	1	40	4258	40	1010	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	607	1824	52	1875	85.0	2	True	AATAGA	-42
PB.8009.5	chr3	-	2443	2	full-splice_match	EPM2AIP1	ENST00000624586.1	513	2	-927	-1003	-27	1003	multi-exon	FALSE	canonical	1	12176	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	146	1345	80.0	-10	True	AATAGA	-35
PB.8009.2	chr3	-	2714	2	full-splice_match	EPM2AIP1	ENST00000624586.1	513	2	-895	-1306	5	1306	multi-exon	FALSE	canonical	1	12176	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	114	1313	95.0	6	True	NA	NA
PB.9543.8	chr5	-	3777	32	novel_in_catalog	LARS	novel	4766	32	NA	NA	40	0	intron_retention	FALSE	canonical	1	26414	junction_16	266609.8729843564	NA	1	NA	TRUE	NA	NA	NA	C	coding	1163	3492	91	3582	30.0	66	False	AATAAA	-16
PB.524.3	chr1	-	3001	11	full-splice_match	GBP2	ENST00000370466.3	2220	11	0	-781	0	781	multi-exon	FALSE	canonical	1	422522	junction_6	170492.76113149204	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	270	2045	75.0	-30	True	NA	NA
PB.8009.1	chr3	-	4350	1	full-splice_match	EPM2AIP1	ENST00000322716.7	8126	1	-73	3849	-73	1419	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	607	1824	165	1988	20.0	423	False	AATAAA	-15
PB.10986.9	chr8	-	2569	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	115	1134	30.0	-3	True	AATAAA	-16
PB.10675.8	chr7	-	6550	6	full-splice_match	SAMD9L	ENST00000411955.5	5831	6	-13	-706	1	-2	multi-exon	FALSE	canonical	1	37328	junction_3	47046.002185095385	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4755	636	5390	15.0	1	True	AATAAA	-19
PB.9647.1	chr5	+	1491	4	full-splice_match	PRR7	ENST00000323249.7	1480	4	-14	3	-14	-3	multi-exon	FALSE	canonical	1	2860	junction_1	85899.51738449343	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	505	1329	20.0	-8807	False	AATAAA	-22
PB.9449.4	chr5	-	2178	3	full-splice_match	C5orf15	ENST00000231512.4	2358	3	143	37	-19	-37	multi-exon	FALSE	canonical	1	397753	junction_1	79532.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	85	858	65.0	143	False	NA	NA
PB.9647.2	chr5	+	1393	3	full-splice_match	PRR7	ENST00000502922.5	1345	3	-32	-16	0	-2	multi-exon	FALSE	canonical	1	21590	junction_1	81909.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	406	1230	20.0	-19	True	AATAAA	-23
PB.9756.2	chr6	+	4825	19	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-793	-950	any annotated donor/acceptor	FALSE	canonical	1	10077	junction_1	98791.53549148547	NA	1	NA	TRUE	NA	NA	NA	C	coding	1246	3741	265	4005	100.0	-7	True	NA	NA
PB.9756.3	chr6	+	4792	19	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-713	-949	any annotated donor/acceptor	FALSE	canonical	1	369	junction_1	100316.2060643035	NA	2	NA	TRUE	NA	NA	NA	C	coding	1246	3741	231	3971	95.0	1	True	NA	NA
PB.9756.1	chr6	+	5126	19	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-838	-694	any annotated donor/acceptor	TRUE	canonical	1	10077	junction_1	98791.53549148547	NA	3	NA	TRUE	NA	NA	NA	C	coding	1246	3741	310	4050	80.0	-24	True	NA	NA
PB.9756.6	chr6	+	5365	18	full-splice_match	JARID2	ENST00000341776.6	5755	18	-304	694	-304	-694	multi-exon	FALSE	canonical	1	178449	junction_6	74565.94936914436	NA	3	NA	TRUE	NA	NA	NA	C	coding	1246	3741	549	4289	80.0	0	True	NA	NA
PB.9756.7	chr6	+	4969	17	novel_in_catalog	JARID2	novel	5755	18	NA	NA	-304	-948	no_combination_of_known_junctions	FALSE	canonical	1	28547	junction_2	98397.24773238627	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	923	4147	90.0	0	True	NA	NA
PB.9756.4	chr6	+	5683	18	full-splice_match	JARID2	ENST00000341776.6	5755	18	-320	392	-320	-392	multi-exon	FALSE	canonical	1	178449	junction_6	74565.94936914436	NA	4	NA	TRUE	NA	NA	NA	C	coding	1246	3741	565	4305	15.0	0	True	AATAAA	-16
PB.9756.5	chr6	+	4938	17	novel_in_catalog	JARID2	novel	5755	18	NA	NA	-304	-951	no_combination_of_known_junctions	FALSE	canonical	1	5093	junction_3	103703.83629880741	NA	1	NA	TRUE	NA	NA	NA	C	coding	1096	3291	829	4119	95.0	0	True	NA	NA
PB.9238.2	chr5	-	2978	13	novel_in_catalog	PLK2	novel	2960	14	NA	NA	1	0	intron_retention	FALSE	canonical	1	526945	junction_12	78561.51912355056	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	821	2380	25.0	0	True	AATAAA	-17
PB.9756.8	chr6	+	3773	13	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-277	976	any annotated donor/acceptor	FALSE	canonical	1	7667	junction_12	96974.94684234887	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	522	3518	5.0	-4919	False	AATAAA	-13
PB.9756.9	chr6	+	5116	19	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-259	-952	any annotated donor/acceptor	TRUE	canonical	1	789	junction_1	119221.28462559769	NA	4	NA	TRUE	NA	NA	NA	C	coding	1264	3795	504	4298	90.0	-34	True	NA	NA
PB.9999.1	chr6	+	2843	5	incomplete-splice_match	SRF	ENST00000265354.5	4202	7	4628	0	4628	0	5prime_fragment	FALSE	canonical	1	512766	junction_3	39370.546179853794	NA	4	NA	TRUE	NA	NA	NA	A	coding	172	519	8	526	0.0	-6269	False	AATAAA	-23
PB.7741.1	chr22	+	2111	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	161979.75664612814	NA	2	NA	TRUE	NA	NA	NA	B	coding	339	1020	384	1403	20.0	-61	False	NA	NA
PB.7600.4	chr22	+	1894	10	novel_not_in_catalog	USP18	novel	2129	11	NA	NA	189	-5	any annotated donor/acceptor	FALSE	canonical	1	314	junction_7	76834.35759805747	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	747	1319	30.0	-6266	False	AATAAA	-12
PB.7600.5	chr22	+	1942	11	novel_not_in_catalog	USP18	novel	2129	11	NA	NA	221	-5	any annotated donor/acceptor	FALSE	canonical	1	314	junction_8	85017.97007133257	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	471	1367	30.0	2	True	AATAAA	-12
PB.7600.6	chr22	+	1804	10	novel_in_catalog	USP18	novel	2129	11	NA	NA	271	-4	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_9	75889.67757911302	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	160	1257	35.0	0	True	AATAAA	-13
PB.8585.4	chr3	-	2415	8	full-splice_match	TBCCD1	ENST00000338733.9	2441	8	24	2	24	0	multi-exon	FALSE	canonical	1	60122	junction_6	21883.80789440411	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	106	1779	30.0	-1	True	ATTAAA	-21
PB.8015.1	chr3	+	2682	17	incomplete-splice_match	VILL	ENST00000383759.6	2787	19	559	-1	-7	1	5prime_fragment	FALSE	canonical	1	57074	junction_5	16776.524610183533	NA	0	NA	TRUE	NA	NA	NA	A	coding	686	2061	491	2551	10.0	-2	True	AGTAAA	-17
PB.7600.1	chr22	+	1854	11	full-splice_match	USP18	ENST00000215794.7	2129	11	271	4	271	-4	multi-exon	FALSE	canonical	1	314	junction_8	82198.4827359362	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	160	1278	35.0	0	True	AATAAA	-13
PB.1999.1	chr11	-	1150	9	full-splice_match	UBXN1	ENST00000301935.9	1153	9	0	3	0	0	multi-exon	FALSE	canonical	1	1116767	junction_1	559042.7067378076	NA	0	NA	TRUE	NA	NA	NA	A	coding	297	894	168	1061	15.0	-18	True	AATAAA	-18
PB.7600.3	chr22	+	1681	8	incomplete-splice_match	USP18	ENST00000215794.7	2129	11	186	5931	186	-5931	3prime_fragment	FALSE	canonical	1	136345	junction_7	30066.918663514014	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	245	1144	90.0	-6269	False	NA	NA
PB.8818.16	chr4	-	2113	11	full-splice_match	RASSF6	ENST00000342081.7	4331	11	52	2166	-31	542	multi-exon	FALSE	canonical	1	4897	junction_10	14684.247778146486	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	80	1189	75.0	-6	True	NA	NA
PB.8818.17	chr4	-	2157	10	full-splice_match	RASSF6	ENST00000395777.6	2735	10	-162	740	-26	542	multi-exon	FALSE	canonical	1	9426	junction_4	13439.702080949986	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	322	1233	75.0	-1	True	NA	NA
PB.10262.1	chr6	-	2935	4	full-splice_match	EPM2A	ENST00000367519.8	3465	4	522	8	-52	0	multi-exon	TRUE	canonical	1	44920	junction_3	3906.866092748338	NA	1	NA	TRUE	NA	NA	NA	A	coding	193	582	250	831	40.0	687	False	AATAAA	-8
PB.8818.15	chr4	-	2321	12	novel_not_in_catalog	RASSF6	novel	5994	11	NA	NA	-22	542	any annotated donor/acceptor	FALSE	canonical	1	798	junction_11	19272.608507781577	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	384	1397	75.0	108	False	NA	NA
PB.8818.12	chr4	-	2463	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	2	3529	2	-508	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	294	1307	40.0	-7	True	ATTAAA	-16
PB.8818.13	chr4	-	2064	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	169	3761	33	542	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	127	1140	75.0	1	True	NA	NA
PB.8818.10	chr4	-	2657	10	novel_in_catalog	RASSF6	novel	5994	11	NA	NA	-18	-207	no_combination_of_known_junctions	FALSE	canonical	1	2875	junction_8	15492.473936291346	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	361	1200	65.0	112	False	AATAGA	-37
PB.9355.29	chr5	+	3034	29	full-splice_match	CAST	ENST00000309190.9	4282	29	-20	1268	-8	3	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	175	2235	20.0	-25	True	AATAAA	-25
PB.7049.9	chr2	+	1250	9	full-splice_match	MFF	ENST00000304593.13	2004	9	99	655	0	-2	multi-exon	FALSE	canonical	1	217259	junction_2	143744.11668955142	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	313	1188	5.0	0	True	TATAAA	-14
PB.10606.1	chr7	+	3161	27	full-splice_match	GTF2IRD1	ENST00000265755.7	3430	27	261	8	-58	-1	multi-exon	FALSE	canonical	1	62879	junction_18	51710.38356675864	NA	0	NA	TRUE	NA	NA	NA	A	coding	959	2880	133	3012	90.0	-328	False	NA	NA
PB.8818.18	chr4	-	1504	10	full-splice_match	RASSF6	ENST00000395777.6	2735	10	-12	1243	-7	39	multi-exon	FALSE	canonical	1	9426	junction_4	13439.702080949986	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	172	1083	35.0	-1	True	AATACA	-8
PB.1742.4	chr11	-	1809	10	full-splice_match	RNH1	ENST00000397614.5	1864	10	55	0	-7	0	multi-exon	FALSE	canonical	1	46875	junction_9	611913.9170714525	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	246	1631	10.0	1	True	ATTAAA	-17
PB.2308.2	chr11	+	5423	22	novel_in_catalog	PHLDB1	novel	5753	24	NA	NA	2	1	intron_retention	TRUE	canonical	1	6671	junction_1	140732.33483774916	NA	0	NA	TRUE	NA	NA	NA	C	coding	1319	3960	261	4220	25.0	3	True	AATAAA	-16
PB.2308.3	chr11	+	4941	18	novel_not_in_catalog	PHLDB1	novel	5753	24	NA	NA	-1585	0	intron_retention	FALSE	canonical	1	484	junction_1	125763.19437778211	NA	3	NA	TRUE	NA	NA	NA	C	coding	1199	3600	140	3739	25.0	-4842	False	AATAAA	-15
PB.2308.1	chr11	+	5263	21	full-splice_match	PHLDB1	ENST00000356063.9	5240	21	-24	1	3	-1	multi-exon	FALSE	canonical	1	51231	junction_1	127683.72115405904	NA	17	NA	TRUE	NA	NA	NA	C	coding	1319	3960	103	4062	25.0	4	True	AATAAA	-14
PB.2308.6	chr11	+	4880	18	novel_in_catalog	PHLDB1	novel	5753	24	NA	NA	104	1	intron_retention	FALSE	canonical	1	60192	junction_1	117527.5262085396	NA	1	NA	TRUE	NA	NA	NA	C	coding	1199	3600	78	3677	25.0	-8581	False	AATAAA	-16
PB.2308.7	chr11	+	4687	16	incomplete-splice_match	PHLDB1	ENST00000356063.9	5240	21	19657	-1	370	1	5prime_fragment	FALSE	canonical	1	204929	junction_1	95696.27809611453	NA	7	NA	TRUE	NA	NA	NA	C	coding	1119	3360	125	3484	25.0	-7838	False	AATAAA	-16
PB.2308.4	chr11	+	4958	19	novel_not_in_catalog	PHLDB1	novel	5753	24	NA	NA	-1556	1	intron_retention	FALSE	canonical	1	484	junction_1	148762.19713260198	NA	7	1	TRUE	NA	NA	NA	C	coding	1214	3645	111	3755	25.0	-4813	False	AATAAA	-16
PB.10560.3	chr7	+	2783	1	novel_in_catalog	ZNF736	novel	562	4	NA	NA	-54	2725	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-56	True	NA	NA
PB.8498.4	chr3	-	4212	21	full-splice_match	IFT80	ENST00000496589.5	3073	21	48	-1187	-2	-1	multi-exon	FALSE	canonical	1	18522	junction_19	50811.85742646592	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	758	2680	35.0	-10	True	AATAAA	-13
PB.6417.9	chr2	+	3769	9	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	-5	5	intron_retention	FALSE	canonical	1	31729	junction_8	53147.91598454261	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	33	677	0.0	16	True	AAGAAA	-20
PB.2308.9	chr11	+	2878	13	novel_not_in_catalog	PHLDB1	novel	5753	24	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	132443.54395455847	NA	5	1	TRUE	NA	NA	NA	C	coding	402	1209	468	1676	25.0	-7043	False	AATAAA	-15
PB.5282.9	chr17	+	3214	9	novel_not_in_catalog	TMC8	novel	4411	16	NA	NA	-461	0	any annotated donor/acceptor	FALSE	canonical	1	15561	junction_1	113951.57187019185	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	337	1359	0.0	-6347	False	NA	NA
PB.2289.1	chr11	+	3417	5	full-splice_match	RBM7	ENST00000375490.9	2064	5	134	-1487	-3	-196	multi-exon	FALSE	canonical	1	18235	junction_4	60864.22097587383	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	10	813	15.0	-6	True	AATAAA	-20
PB.2289.6	chr11	+	1910	5	full-splice_match	RBM7	ENST00000540163.5	4243	5	634	1699	-2	-1	multi-exon	FALSE	canonical	1	18235	junction_4	65586.19350900005	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	9	809	20.0	-5	True	TATAAA	-1
PB.8498.6	chr3	-	4070	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50265	-29546	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	59452.84628767887	NA	3	NA	TRUE	NA	NA	NA	B	coding	777	2334	212	2545	25.0	-37	False	AATAAA	-6
PB.2289.4	chr11	+	3147	6	novel_not_in_catalog	RBM7	novel	4243	5	NA	NA	4	-379	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	71395.64640956758	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	56	856	90.0	-7	True	CATAAA	-8
PB.2289.5	chr11	+	3308	5	full-splice_match	RBM7	ENST00000375490.9	2064	5	96	-1340	12	-343	multi-exon	FALSE	canonical	1	18235	junction_4	60864.22097587383	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	48	851	15.0	1	True	CATAAA	-44
PB.7509.6	chr21	-	3129	5	full-splice_match	RUNX1	ENST00000399240.5	1590	5	-1516	-23	-9	-8	multi-exon	FALSE	canonical	1	51354	junction_2	115988.31792684986	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	1588	2757	25.0	-7	True	AATAAA	-15
PB.5282.1	chr17	+	4490	16	full-splice_match	TMC8	ENST00000318430.9	4411	16	-79	0	-63	0	multi-exon	FALSE	canonical	1	106695	junction_15	75510.20139351298	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	454	2634	0.0	-7082	False	NA	NA
PB.5282.2	chr17	+	2866	16	full-splice_match	TMC8	ENST00000318430.9	4411	16	-57	1602	-41	137	multi-exon	FALSE	canonical	1	106695	junction_15	75510.20139351298	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	432	2612	20.0	-7060	False	NA	NA
PB.5282.3	chr17	+	2999	14	novel_in_catalog	TMC8	novel	433	2	NA	NA	-17	1405	intron_retention	FALSE	canonical	1	121106	junction_2	71898.18998725759	NA	2	NA	TRUE	NA	NA	NA	C	coding	450	1353	408	1760	55.0	0	True	NA	NA
PB.5282.4	chr17	+	3223	14	incomplete-splice_match	TMC8	ENST00000318430.9	4411	16	-31	3241	-15	-1502	intron_retention	FALSE	canonical	1	121106	junction_2	72075.62880284461	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	406	2547	95.0	2	True	NA	NA
PB.5282.5	chr17	+	4380	16	novel_in_catalog	TMC8	novel	433	2	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	62121	junction_10	86111.395417383	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	379	1842	0.0	6	True	NA	NA
PB.5282.6	chr17	+	2732	15	novel_in_catalog	TMC8	novel	433	2	NA	NA	-3	-1501	combination_of_known_junctions	FALSE	canonical	1	62121	junction_10	83339.91305249208	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	378	1841	100.0	7	True	NA	NA
PB.5282.7	chr17	+	2746	16	novel_not_in_catalog	TMC8	novel	433	2	NA	NA	3	151	any annotated donor/acceptor	FALSE	canonical	1	8509	junction_12	84176.70892265205	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	370	2478	20.0	15	True	NA	NA
PB.583.17	chr1	+	3311	6	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	5	365	intron_retention	FALSE	canonical	1	141279	junction_4	190659.93280540092	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	780	2532	3311	70.0	5	True	NA	NA
PB.11490.2	chr9	+	1986	20	full-splice_match	IFT74	ENST00000380062.9	2160	20	48	126	9	-80	multi-exon	FALSE	canonical	1	97047	junction_2	27771.75973155568	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	116	1918	70.0	2	True	NA	NA
PB.9196.19	chr5	-	3605	8	novel_in_catalog	PRKAA1	novel	5088	9	NA	NA	-4	-13	intron_retention	FALSE	canonical	1	288214	junction_6	76111.7573992886	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1422	2183	3604	50.0	-2	True	ATTAAA	-11
PB.11240.2	chr8	-	2966	15	full-splice_match	RAD54B	ENST00000336148.9	3068	15	21	81	-6	-80	multi-exon	FALSE	canonical	1	67422	junction_12	14895.444935843128	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	105	2837	40.0	-1	True	AATATA	-14
PB.5303.1	chr17	+	2887	18	full-splice_match	SLC26A11	ENST00000361193.7	2885	18	-4	2	-1	0	multi-exon	FALSE	canonical	1	49110	junction_2	27232.772588902746	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	285	2105	25.0	-12	True	NA	NA
PB.5303.2	chr17	+	2975	18	novel_in_catalog	SLC26A11	novel	762	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	9384	junction_4	38119.78363347536	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	301	2193	25.0	-28	True	NA	NA
PB.9260.10	chr5	+	2771	4	incomplete-splice_match	SREK1	ENST00000519259.5	9353	5	7001	-5	-4040	5	5prime_fragment	FALSE	canonical	1	565716	junction_2	29464.893057482645	NA	1	NA	TRUE	NA	NA	NA	C	coding	71	216	540	755	30.0	469	False	AATAAA	-18
PB.1168.2	chr1	-	2316	1	incomplete-splice_match	ITPKB	ENST00000272117.7	5822	7	103452	1	103452	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	3114	False	AATAAA	-13
PB.8603.2	chr3	-	7220	34	novel_not_in_catalog	ATP13A3	novel	7720	33	NA	NA	-3059	0	any annotated donor/acceptor	FALSE	canonical	1	1230	junction_33	138470.46172572128	NA	7	NA	TRUE	NA	NA	NA	B	coding	1256	3771	211	3981	30.0	4272	False	AATAAA	-15
PB.6990.140	chr2	-	2435	13	full-splice_match	FN1	ENST00000426059.1	2388	13	-43	-4	-43	4	multi-exon	FALSE	canonical	1	7013395	junction_12	1107057.4946712814	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	315	2288	5.0	313	False	ATTAAA	-21
PB.6990.141	chr2	-	4554	1	novel_in_catalog	FN1	novel	8708	47	NA	NA	0	-12226	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	3	12	454	465	75.0	-1	True	NA	NA
PB.2400.9	chr12	+	6412	6	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	7	-100139	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	255004.65329369972	NA	2	NA	TRUE	NA	NA	NA	B	coding	289	870	273	1142	20.0	7	True	AATAAA	-15
PB.1632.4	chr10	-	1898	10	full-splice_match	PCGF6	ENST00000369847.3	2230	10	7	325	7	6	multi-exon	FALSE	canonical	1	2459	junction_3	20977.68943837332	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	62	1114	40.0	-11	True	AATAAA	-19
PB.6414.23	chr2	-	2444	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	41	688	no_combination_of_known_junctions	FALSE	canonical	1	3425	junction_15	113571.98318626924	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	101	1756	85.0	122	False	NA	NA
PB.8603.1	chr3	-	7168	34	novel_not_in_catalog	ATP13A3	novel	7720	33	NA	NA	26	5	any annotated donor/acceptor	TRUE	canonical	0	0	junction_33	138595.75176233755	NA	3	1	TRUE	NA	NA	NA	B	coding	1256	3771	146	3916	10.0	25	True	AATAAA	-28
PB.1632.1	chr10	-	2218	10	full-splice_match	PCGF6	ENST00000369847.3	2230	10	12	0	12	0	multi-exon	FALSE	canonical	1	2459	junction_3	20977.68943837332	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	57	1109	20.0	-6	True	AATAAA	-17
PB.1011.30	chr1	-	3819	11	incomplete-splice_match	UCHL5	ENST00000367450.7	1355	12	-67	2304	-2	-2	3prime_fragment	FALSE	canonical	1	82301	junction_3	228669.76146827984	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	104	1156	25.0	-25	True	AATAAA	-18
PB.1632.3	chr10	-	2125	8	novel_in_catalog	PCGF6	novel	1950	7	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	2459	junction_3	22751.872041389364	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	82	678	20.0	-8	True	AATAAA	-15
PB.1632.2	chr10	-	2213	9	novel_in_catalog	PCGF6	novel	1950	7	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	7162	junction_3	19975.522294485818	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	82	918	20.0	-8	True	AATAAA	-15
PB.2400.1	chr12	+	6728	6	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	-3868	-100138	any annotated donor/acceptor	FALSE	canonical	1	3622	junction_1	253757.79997343925	NA	5	NA	TRUE	NA	NA	NA	B	coding	289	870	516	1385	15.0	2	True	AATAAA	-16
PB.11178.2	chr8	-	1233	7	full-splice_match	LACTB2	ENST00000276590.4	1508	7	-55	330	-38	-330	multi-exon	FALSE	canonical	1	264883	junction_1	50581.63095323132	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	93	959	60.0	29	False	AATAAA	-11
PB.2400.3	chr12	+	6114	5	full-splice_match	CCND2	ENST00000261254.7	6480	5	371	-5	371	5	multi-exon	FALSE	canonical	1	315169	junction_2	144837.24092127514	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	61	768	15.0	-4750	False	AATAAA	-19
PB.2400.2	chr12	+	2804	4	incomplete-splice_match	CCND2	ENST00000261254.7	6480	5	127	14418	127	1771	3prime_fragment	FALSE	canonical	1	315169	junction_2	166134.8924104212	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	143	889	25.0	-4994	False	TATAAA	-13
PB.2400.5	chr12	+	1823	5	full-splice_match	CCND2	ENST00000261254.7	6480	5	-26	4683	-26	2699	multi-exon	FALSE	canonical	1	315169	junction_2	144837.24092127514	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	296	1165	20.0	2	True	AAAAAG	-22
PB.2400.4	chr12	+	2286	5	full-splice_match	CCND2	ENST00000261254.7	6480	5	390	3804	390	3578	multi-exon	FALSE	canonical	1	315169	junction_2	144837.24092127514	NA	4	NA	TRUE	NA	NA	NA	C	coding	235	708	42	749	75.0	-4731	False	AATGAA	-32
PB.2400.7	chr12	+	1118	5	full-splice_match	CCND2	ENST00000261254.7	6480	5	232	5130	232	2252	multi-exon	FALSE	canonical	1	315169	junction_2	144837.24092127514	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	38	907	35.0	-4889	False	AATAAA	-30
PB.2400.6	chr12	+	3126	4	incomplete-splice_match	CCND2	ENST00000261254.7	6480	5	-15	14238	-15	1951	3prime_fragment	FALSE	canonical	1	315169	junction_2	166134.8924104212	NA	5	NA	TRUE	NA	NA	NA	C	coding	248	747	285	1031	25.0	-5	True	AAGAAA	-14
PB.10259.2	chr6	+	1936	2	full-splice_match	STX11	ENST00000367568.4	1926	2	-9	-1	-9	1	multi-exon	FALSE	canonical	1	95252	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	193	1056	5.0	0	True	TATAAA	-18
PB.8840.2	chr4	+	3942	7	incomplete-splice_match	CCNG2	ENST00000316355.9	5526	8	56	2849	-3	1026	intron_retention	FALSE	canonical	1	278896	junction_1	105760.27879031691	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	301	1215	15.0	-36	True	AATAAA	-18
PB.5093.1	chr17	+	3635	1	antisense	novelGene_ZNF652_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.3079.2	chr13	+	2188	1	novel_in_catalog	POMP	novel	1330	6	NA	NA	11	-17623	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	108	327	71	397	70.0	-18	True	NA	NA
PB.3079.3	chr13	+	582	6	full-splice_match	POMP	ENST00000380842.4	1330	6	23	725	23	-725	multi-exon	FALSE	canonical	1	2849386	junction_3	470062.0235720388	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	59	484	30.0	-6	True	ATTAAA	-17
PB.3079.1	chr13	+	1337	6	full-splice_match	POMP	ENST00000380842.4	1330	6	22	-29	22	29	multi-exon	FALSE	canonical	1	2849386	junction_3	470062.0235720388	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	60	485	35.0	-7	True	GATAAA	-12
PB.10338.31	chr6	-	5769	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	124018.53378629907	NA	5	NA	TRUE	NA	NA	NA	C	coding	856	2571	1164	3734	15.0	-1	True	AATAAA	-20
PB.8724.4	chr4	+	1775	11	full-splice_match	RBPJ	ENST00000361572.10	1697	11	99	-177	-63	1	multi-exon	FALSE	canonical	1	32043	junction_1	164193.69915182496	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	96	1598	100.0	-36	True	NA	NA
PB.10338.33	chr6	-	7458	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-8	-7	intron_retention	FALSE	canonical	1	259346	junction_13	95249.35780696897	NA	6	NA	TRUE	NA	NA	NA	C	coding	1095	3288	2136	5423	15.0	-1	True	AATAAA	-20
PB.10338.32	chr6	-	5599	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	-7	any annotated donor/acceptor	FALSE	canonical	1	3338	junction_1	123713.60611313026	NA	0	NA	TRUE	NA	NA	NA	C	coding	1176	3531	146	3676	15.0	-1	True	AATAAA	-20
PB.6414.22	chr2	-	2665	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	-546	768	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	161512.15515325507	NA	2	1	TRUE	NA	NA	NA	C	coding	541	1626	272	1897	35.0	-498	False	NA	NA
PB.504.19	chr1	-	2507	14	full-splice_match	MCOLN2	ENST00000284027.5	1729	14	-1	-777	0	0	multi-exon	FALSE	canonical	1	2351	junction_13	29781.660544187773	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	114	1730	80.0	-5	True	NA	NA
PB.8724.5	chr4	+	1616	11	full-splice_match	RBPJ	ENST00000361572.10	1697	11	127	-46	-35	-13	multi-exon	FALSE	canonical	1	32043	junction_1	164193.69915182496	NA	6	NA	TRUE	NA	NA	NA	C	coding	500	1503	68	1570	65.0	-8	True	NA	NA
PB.5701.2	chr19	-	4088	25	novel_not_in_catalog	TYK2	novel	3971	23	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	4081	junction_15	157253.6784186831	NA	0	NA	TRUE	NA	NA	NA	C	coding	1138	3417	367	3783	15.0	28	False	AATAAA	-20
PB.8724.2	chr4	+	1936	12	full-splice_match	RBPJ	ENST00000342295.5	5860	12	-20	3944	4	1	multi-exon	FALSE	canonical	1	6553	junction_1	181529.9552307625	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	257	1759	100.0	-7879	False	NA	NA
PB.9355.25	chr5	+	4273	29	full-splice_match	CAST	ENST00000309190.9	4282	29	5	4	0	0	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	150	2210	25.0	0	True	ATTAAA	-18
PB.642.14	chr1	-	7144	11	full-splice_match	IGSF3	ENST00000369486.7	7254	11	-41	151	-39	-151	multi-exon	FALSE	canonical	1	62188	junction_10	40101.81376945437	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3585	808	4392	60.0	-88	False	NA	NA
PB.11005.7	chr8	+	2632	17	novel_in_catalog	INTS10	novel	2804	17	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	1	10266	junction_2	125801.53895718484	NA	2	NA	TRUE	NA	NA	NA	C	coding	597	1794	581	2374	45.0	2	True	AATAAA	-16
PB.8724.1	chr4	+	1728	11	novel_in_catalog	RBPJ	novel	609	5	NA	NA	2	1	no_combination_of_known_junctions	FALSE	canonical	1	298	junction_1	170052.6497917924	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	154	1551	100.0	-7905	False	NA	NA
PB.11244.9	chr8	+	4162	26	novel_in_catalog	INTS8	novel	735	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	164843	junction_1	134494.12117295834	NA	2	NA	TRUE	NA	NA	NA	C	coding	780	2343	148	2490	40.0	-11	True	AATAAA	-29
PB.6414.25	chr2	-	2587	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	55	620	any annotated donor/acceptor	FALSE	canonical	1	6368	junction_3	152096.34063123204	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	254	1750	50.0	-11	True	ATTAAA	-20
PB.595.1	chr1	+	5047	4	full-splice_match	CYB561D1	ENST00000310611.8	5009	4	-31	-7	-11	0	multi-exon	FALSE	canonical	1	23298	junction_1	31511.693494461528	NA	4	1	TRUE	NA	NA	NA	C	coding	171	516	351	866	5.0	0	True	NA	NA
PB.6998.1	chr2	-	5253	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	960	2	102	-2	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	169	609	5.0	1333	False	AATAAA	-15
PB.9355.26	chr5	+	3959	29	full-splice_match	CAST	ENST00000309190.9	4282	29	-30	353	-18	-349	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	185	2245	50.0	1	True	AGTAAA	-13
PB.3949.2	chr15	-	2046	7	full-splice_match	ANP32A	ENST00000465139.6	2440	7	24	370	-3	2	multi-exon	FALSE	canonical	1	372796	junction_4	481155.93739605066	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	121	870	5.0	-4	True	AATAAA	-16
PB.3949.3	chr15	-	1941	7	full-splice_match	ANP32A	ENST00000267918.9	1084	7	-18	-839	-2	3	multi-exon	FALSE	canonical	1	5741	junction_6	576119.6045636319	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	3	True	AATAAA	-17
PB.10488.3	chr7	-	2194	7	novel_not_in_catalog	ELMO1	novel	2524	7	NA	NA	33733	5	any annotated donor/acceptor	FALSE	canonical	1	24631	junction_6	133088.02618275702	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	256	999	15.0	-11	False	AATAAA	-20
PB.3949.1	chr15	-	2423	7	full-splice_match	ANP32A	ENST00000465139.6	2440	7	20	-3	-7	3	multi-exon	FALSE	canonical	1	372796	junction_4	481155.93739605066	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	125	874	25.0	48	False	TATAAA	-21
PB.3949.6	chr15	-	1119	7	full-splice_match	ANP32A	ENST00000465139.6	2440	7	-18	1339	-16	-131	multi-exon	FALSE	canonical	1	372796	junction_4	481155.93739605066	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	163	912	10.0	10	False	AATAAA	-18
PB.9799.10	chr6	+	3689	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	85381.5039922838	NA	5	1	TRUE	NA	NA	NA	B	coding	253	762	337	1098	15.0	0	True	NA	NA
PB.3949.4	chr15	-	2071	7	novel_in_catalog	ANP32A	novel	2440	7	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	1	29422	junction_6	570420.0539911356	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-12	True	AATAAA	-16
PB.3949.5	chr15	-	1644	7	full-splice_match	ANP32A	ENST00000465139.6	2440	7	-8	804	-6	-15	multi-exon	FALSE	canonical	1	372796	junction_4	481155.93739605066	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	153	902	70.0	-9	True	ATTAAA	-37
PB.10488.9	chr7	-	4777	22	novel_not_in_catalog	ELMO1	novel	2524	7	NA	NA	22	-4	any annotated donor/acceptor	FALSE	canonical	1	9696	junction_21	84244.43937307346	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	1408	3591	15.0	-8	True	AATAAA	-11
PB.10488.8	chr7	-	3625	22	full-splice_match	ELMO1	ENST00000448602.5	2621	22	183	-1187	-90	-3	multi-exon	FALSE	canonical	1	18197	junction_21	83108.58465881205	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	255	2438	10.0	-3	True	AATAAA	-12
PB.6414.24	chr2	-	2486	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	82	688	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	143	1798	85.0	16	True	NA	NA
PB.7638.8	chr22	-	6050	1	novel_in_catalog	MAPK1	novel	11022	9	NA	NA	3052	3657	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	13	NA	NA	NA	NA	NA	C	coding	111	336	2070	2405	45.0	6648	False	ATTAAA	-18
PB.6903.3	chr2	-	1721	13	full-splice_match	HIBCH	ENST00000392332.7	2463	13	28	714	28	0	multi-exon	FALSE	canonical	1	39296	junction_1	78627.18719705565	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	113	1129	25.0	-8	True	AATAAA	-21
PB.8525.11	chr3	-	3095	1	novel_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	24440	-8701	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	3952	False	AGTAAA	-12
PB.8525.10	chr3	-	1294	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	122	any annotated donor/acceptor	FALSE	canonical	1	19907	junction_1	18331.574636857215	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	-1	True	NA	NA
PB.2662.28	chr12	-	1888	9	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	23707	junction_8	618874.9291515689	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	32	1780	5.0	-1	True	AATAAA	-14
PB.2662.29	chr12	-	1852	11	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9981	junction_9	537279.13795248	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	32	1744	5.0	-1	True	AATAAA	-14
PB.8525.15	chr3	-	2278	2	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3105	-34098	any annotated donor/acceptor	FALSE	canonical	1	59620	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-7	False	NA	NA
PB.8525.14	chr3	-	5234	1	genic	NAALADL2-AS2	novel	NA	NA	NA	NA	-3096	-34098	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	2	True	NA	NA
PB.7110.61	chr2	+	4155	11	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	634146	junction_5	844285.6252934547	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	1484	2068	25.0	-10	True	AATAAA	-20
PB.7110.60	chr2	+	1769	13	full-splice_match	SEPT2	ENST00000391971.6	3315	13	72	1474	-2	-73	multi-exon	FALSE	canonical	1	634146	junction_7	777001.6272450786	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	68	1153	40.0	-13	True	AATAAA	-18
PB.2662.22	chr12	-	1867	9	full-splice_match	PMEL	ENST00000550464.5	1867	9	0	0	0	0	multi-exon	FALSE	canonical	1	23707	junction_8	485634.50004554284	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	32	1759	5.0	-1	True	AATAAA	-14
PB.2662.23	chr12	-	1999	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	9981	junction_8	586293.6739032647	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	32	1891	5.0	-1	True	AATAAA	-14
PB.2662.20	chr12	-	2129	11	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	443931.89429687295	NA	9	1	TRUE	NA	NA	NA	C	coding	617	1854	32	1885	5.0	-1	True	AATAAA	-14
PB.2662.21	chr12	-	2035	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	2	0	intron_retention	FALSE	canonical	1	818	junction_1	427148.4388078692	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	30	1805	5.0	1	True	AATAAA	-14
PB.7881.3	chr22	-	6376	23	novel_in_catalog	TUBGCP6	novel	5612	25	NA	NA	-31	-1	intron_retention	FALSE	canonical	1	170311	junction_21	83033.6085502493	NA	1	NA	TRUE	NA	NA	NA	C	coding	1437	4314	565	4878	5.0	-1	True	AATAAA	-17
PB.2662.27	chr12	-	1888	11	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	8979	junction_5	439712.44450241566	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	32	1780	5.0	-1	True	AATAAA	-14
PB.2662.24	chr12	-	1978	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	9981	junction_8	465008.17081155267	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	32	1870	5.0	-1	True	AATAAA	-14
PB.2662.25	chr12	-	1963	11	novel_in_catalog	PMEL	novel	2127	11	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	741	junction_5	441931.7905104927	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	29	1855	5.0	2	True	AATAAA	-14
PB.5409.11	chr18	-	1996	5	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	-8	214	combination_of_known_junctions	FALSE	canonical	1	1636	junction_1	76406.7107241733	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	269	979	40.0	-11	True	ATTAAA	-23
PB.5409.10	chr18	-	2090	6	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	-17	214	combination_of_known_junctions	FALSE	canonical	1	1636	junction_1	67553.6152536635	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	363	1073	40.0	35	True	ATTAAA	-23
PB.5409.13	chr18	-	2755	5	novel_not_in_catalog	FAM210A	novel	4340	5	NA	NA	246	208	any annotated donor/acceptor	FALSE	canonical	1	42	junction_4	102719.3761541609	NA	3	NA	TRUE	NA	NA	NA	C	coding	272	819	1132	1950	45.0	298	False	ATTAAA	-17
PB.5409.12	chr18	-	1838	4	full-splice_match	FAM210A	ENST00000592976.5	1091	4	1	-748	1	137	multi-exon	FALSE	canonical	1	142639	junction_3	34414.386926916995	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	286	1104	20.0	-28	True	CATAAA	-12
PB.5409.15	chr18	-	1774	3	full-splice_match	FAM210A	ENST00000588475.1	1389	3	-57	-328	-2	208	multi-exon	FALSE	canonical	1	21408	junction_1	60615.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	166	501	263	763	45.0	-5	True	ATTAAA	-17
PB.5409.14	chr18	-	2627	4	novel_not_in_catalog	FAM210A	novel	4340	5	NA	NA	246	208	any annotated donor/acceptor	FALSE	canonical	1	1065	junction_3	97183.95451010532	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1004	1822	45.0	298	False	ATTAAA	-17
PB.5409.17	chr18	-	1735	4	full-splice_match	FAM210A	ENST00000592976.5	1091	4	3	-647	3	36	multi-exon	FALSE	canonical	1	142639	junction_3	34414.386926916995	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	284	1102	25.0	-26	True	AATGAA	-31
PB.5409.16	chr18	-	3168	4	novel_not_in_catalog	FAM210A	novel	4340	5	NA	NA	11	137	any annotated donor/acceptor	FALSE	canonical	1	3874	junction_1	75626.7715663941	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	276	1001	20.0	-18	True	CATAAA	-12
PB.5409.19	chr18	-	1930	5	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	0	82	combination_of_known_junctions	FALSE	canonical	1	10035	junction_4	97234.89093009515	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	433	1251	25.0	-35	True	AATATA	-14
PB.5409.18	chr18	-	1851	5	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	11	88	combination_of_known_junctions	FALSE	canonical	1	1636	junction_1	76406.7107241733	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	250	960	25.0	8	True	AATATA	-20
PB.9285.11	chr5	-	3064	1	novel_in_catalog	MRPS27	novel	2785	11	NA	NA	-6330	2415	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	AATAAA	-36
PB.9285.10	chr5	-	2501	10	novel_not_in_catalog	MRPS27	novel	2785	11	NA	NA	-9390	0	intron_retention	FALSE	canonical	1	419	junction_9	200742.86525734456	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	45	1121	20.0	NA	False	AATAAA	-13
PB.7517.7	chr21	+	2694	11	novel_in_catalog	TTC3	novel	769	9	NA	NA	0	406	combination_of_known_junctions	FALSE	canonical	1	11239	junction_7	36524.148141195576	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	260	1162	70.0	-2	True	AATAAA	-11
PB.7517.6	chr21	+	2937	24	novel_in_catalog	TTC3	novel	769	9	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	96659.96422949308	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2604	334	2937	75.0	-2	True	NA	NA
PB.7517.5	chr21	+	3978	27	novel_in_catalog	TTC3	novel	769	9	NA	NA	0	-3239	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	104060.17183463824	NA	5	NA	TRUE	NA	NA	NA	C	coding	1251	3753	225	3977	75.0	-2	True	ATTAAA	-14
PB.7517.4	chr21	+	2352	21	novel_in_catalog	TTC3	novel	769	9	NA	NA	-1	-4821	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	103197.761245872	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2127	226	2352	80.0	-3	True	NA	NA
PB.3332.10	chr14	-	2715	20	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	-2	1	intron_retention	FALSE	canonical	1	85986	junction_18	183513.3686133292	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	1330	2541	35.0	-3	True	AATAAA	-25
PB.3332.11	chr14	-	2791	19	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	0	-1	intron_retention	FALSE	canonical	1	85986	junction_17	171701.16887589544	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	880	2619	35.0	9692	False	AATAAA	-23
PB.2741.1	chr12	+	3653	4	novel_not_in_catalog	DYRK2	novel	568	2	NA	NA	-19	1449	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	47854.78421920494	NA	1	1	TRUE	NA	NA	NA	B	coding	601	1806	203	2008	65.0	-1	True	AAGAAA	-44
PB.8086.4	chr3	-	2934	6	full-splice_match	NME6	ENST00000442597.5	757	6	26	-2203	-1	467	multi-exon	FALSE	canonical	1	58356	junction_5	71451.014415752	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	53	613	25.0	-31	True	NA	NA
PB.8644.5	chr4	-	3447	3	full-splice_match	ZNF721	ENST00000505900.1	664	3	4	-2787	4	399	multi-exon	FALSE	canonical	1	135609	junction_1	50324.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	181	3048	75.0	-14	True	NA	NA
PB.7517.9	chr21	+	4134	29	novel_in_catalog	TTC3	novel	769	9	NA	NA	3	986	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	105592.64236173086	NA	1	NA	TRUE	NA	NA	NA	C	coding	1304	3912	222	4133	65.0	1	True	AAGAAA	-45
PB.7517.8	chr21	+	2584	26	incomplete-splice_match	TTC3	ENST00000418766.5	3771	33	3	13782	3	2	3prime_fragment	FALSE	canonical	1	11239	junction_7	85794.25523848552	NA	1	NA	TRUE	NA	NA	NA	C	coding	784	2352	232	2583	50.0	-20	True	AAAAAG	-19
PB.8444.7	chr3	-	2252	9	novel_in_catalog	ATR	novel	8249	47	NA	NA	-12	162	combination_of_known_junctions	FALSE	canonical	1	4980	junction_4	35840.263166714816	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2118	135	2252	60.0	-4	True	ACTAAA	-35
PB.8444.6	chr3	-	2339	10	incomplete-splice_match	ATR	ENST00000350721.8	8249	47	93	106671	-9	162	3prime_fragment	FALSE	canonical	1	77043	junction_7	18198.182111761587	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2310	30	2339	60.0	-11	True	ACTAAA	-35
PB.8444.5	chr3	-	3153	15	incomplete-splice_match	ATR	ENST00000350721.8	8249	47	68	100314	-34	6519	3prime_fragment	FALSE	canonical	1	65804	junction_5	19087.875141790177	NA	0	NA	TRUE	NA	NA	NA	C	coding	1033	3099	55	3153	30.0	-36	True	AATAAA	-8
PB.7251.2	chr20	+	3955	5	novel_in_catalog	TP53INP2	novel	4184	5	NA	NA	-4	-54	combination_of_known_junctions	FALSE	canonical	1	4438	junction_1	37225.389272645625	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	215	877	70.0	-11	True	NA	NA
PB.7969.14	chr3	-	2109	20	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	-1	-7248	combination_of_known_junctions	FALSE	canonical	1	48855	junction_19	79895.90386263678	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1875	234	2108	65.0	1	True	AGTAAA	-21
PB.8444.1	chr3	-	5053	33	novel_not_in_catalog	ATR	novel	718	4	NA	NA	9435	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	44797.83483847008	NA	0	NA	TRUE	NA	NA	NA	C	coding	1528	4587	272	4858	30.0	6562	False	AATAAA	-18
PB.7251.1	chr20	+	4140	5	full-splice_match	TP53INP2	ENST00000374810.7	4184	5	-7	51	-7	-51	multi-exon	FALSE	canonical	1	43437	junction_4	21774.83153206931	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	397	1059	75.0	-61	True	NA	NA
PB.6414.26	chr2	-	2550	17	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	72	688	any annotated donor/acceptor	FALSE	canonical	1	2765	junction_2	135277.64082642223	NA	2	NA	TRUE	NA	NA	NA	C	coding	541	1626	237	1862	85.0	6	True	NA	NA
PB.11527.2	chr9	+	3422	9	full-splice_match	CREB3	ENST00000353704.2	1832	9	293	-1883	30	1883	multi-exon	FALSE	canonical	1	623156	junction_4	81023.14557726313	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	146	1261	20.0	25	True	ATTAAA	-16
PB.11527.3	chr9	+	1584	9	full-splice_match	CREB3	ENST00000353704.2	1832	9	241	7	-22	-7	multi-exon	FALSE	canonical	1	623156	junction_4	81023.14557726313	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	198	1313	20.0	3	True	AATAAA	-12
PB.6112.1	chr19	-	2480	16	novel_in_catalog	PLA2G4C	novel	2458	17	NA	NA	-20	-1	combination_of_known_junctions	TRUE	canonical	1	1712	junction_8	24131.499509884496	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	384	1982	5.0	31	False	NA	NA
PB.9283.10	chr5	+	2461	6	incomplete-splice_match	MCCC2	ENST00000340941.10	3665	17	56520	5	17163	-5	5prime_fragment	FALSE	canonical	1	516994	junction_3	45072.95704699216	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	152	622	30.0	NA	False	AATAAA	-10
PB.6112.3	chr19	-	2526	17	full-splice_match	PLA2G4C	ENST00000354276.7	2496	17	-35	5	0	-3	multi-exon	FALSE	canonical	1	14702	junction_1	20823.95294777372	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	364	1947	10.0	-1	True	NA	NA
PB.6112.2	chr19	-	2484	17	full-splice_match	PLA2G4C	ENST00000599921.5	1984	17	-5	-495	0	-2	multi-exon	FALSE	canonical	1	66731	junction_16	13059.987399346668	NA	2	NA	TRUE	NA	NA	NA	C	coding	541	1626	364	1989	10.0	-1	True	NA	NA
PB.6112.5	chr19	-	3655	7	incomplete-splice_match	PLA2G4C	ENST00000599921.5	1984	17	-27	44560	-22	2561	3prime_fragment	FALSE	canonical	1	66731	junction_6	13476.518846579862	NA	2	NA	TRUE	NA	NA	NA	C	coding	277	834	386	1219	40.0	11	True	NA	NA
PB.6112.4	chr19	-	1892	15	novel_in_catalog	PLA2G4C	novel	2458	17	NA	NA	-11	55	combination_of_known_junctions	FALSE	canonical	1	24577	junction_1	18919.364378588303	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	375	1712	40.0	-12	True	NA	NA
PB.11128.6	chr8	-	4748	18	novel_not_in_catalog	RB1CC1	novel	6635	24	NA	NA	-2	15102	any annotated donor/acceptor	FALSE	canonical	1	563	junction_17	116740.59714535759	NA	5	1	TRUE	NA	NA	NA	C	coding	1339	4017	732	4748	70.0	0	True	NA	NA
PB.6112.6	chr19	-	2377	8	novel_not_in_catalog	PLA2G4C	novel	2458	17	NA	NA	-4	2566	any annotated donor/acceptor	FALSE	canonical	1	1920	junction_1	30253.451935275087	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	368	1102	35.0	-5	True	NA	NA
PB.4419.1	chr16	+	1884	12	incomplete-splice_match	TENT4B	ENST00000436909.7	4635	13	1131	2334	-112	-906	5prime_fragment	FALSE	canonical	1	99622	junction_1	51285.45242670255	NA	0	NA	TRUE	NA	NA	NA	A	coding	489	1470	246	1715	85.0	398	False	NA	NA
PB.8086.2	chr3	-	3728	6	full-splice_match	NME6	ENST00000643457.1	1320	6	22	-2430	1	-843	multi-exon	FALSE	canonical	1	38763	junction_5	77134.02083646359	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	96	656	80.0	0	True	NA	NA
PB.11430.4	chr9	+	2093	3	novel_not_in_catalog	RFX3-AS1	novel	552	6	NA	NA	-16499	-5955	any annotated donor/acceptor	TRUE	canonical	1	1043	junction_1	322.0	NA	6	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.9438.1	chr5	+	2886	3	full-splice_match	C5orf56	ENST00000461203.5	521	3	-80	-2285	-19	2285	multi-exon	FALSE	canonical	1	84858	junction_1	31643.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	576	923	85.0	-28	True	NA	NA
PB.9438.3	chr5	+	3226	4	incomplete-splice_match	C5orf56	ENST00000407797.6	1570	5	-42	2998	27	-2998	3prime_fragment	FALSE	canonical	1	6733	junction_3	57836.6515301692	NA	1	1	TRUE	NA	NA	NA	C	coding	127	384	210	593	100.0	18	True	AAGAAA	-19
PB.11079.1	chr8	+	2186	1	intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6585.1	chr2	-	1265	9	full-splice_match	SUCLG1	ENST00000393868.6	1475	9	203	7	-16	0	multi-exon	FALSE	canonical	1	778432	junction_8	321624.1501656087	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	48	1049	25.0	2	True	AATAAA	-17
PB.7692.10	chr22	-	2688	20	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	38628	junction_17	196547.3502410722	NA	15	2	TRUE	NA	NA	NA	C	coding	704	2115	175	2289	30.0	-4	True	AATAAA	-16
PB.6585.3	chr2	-	2263	9	novel_in_catalog	SUCLG1	novel	1475	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	9053	junction_3	514061.66786763957	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	12	719	25.0	38	True	AATAAA	-17
PB.6585.2	chr2	-	2959	8	novel_in_catalog	SUCLG1	novel	1475	9	NA	NA	-18	0	intron_retention	FALSE	canonical	1	778432	junction_7	342889.5631852736	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	50	757	25.0	0	True	AATAAA	-17
PB.9816.1	chr6	+	3809	3	incomplete-splice_match	ZSCAN16	ENST00000340487.4	1328	4	21	6	21	-6	intron_retention	FALSE	canonical	1	62461	junction_1	22467.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	181	546	129	674	50.0	-41	False	ATTAAA	-13
PB.10935.7	chr7	-	2754	15	full-splice_match	ABCF2	ENST00000287844.6	3546	15	5	787	5	-787	multi-exon	FALSE	canonical	1	198250	junction_7	165357.9553995618	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	106	1977	30.0	-34	True	NA	NA
PB.1267.3	chr10	-	1858	4	full-splice_match	IDI1	ENST00000491735.1	1066	4	200	-992	-20	-3	multi-exon	FALSE	canonical	1	147591	junction_3	449155.6753200634	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-18	True	AGTAAA	-14
PB.2755.1	chr12	+	3074	9	full-splice_match	FRS2	ENST00000549921.5	1952	9	-35	-1087	-9	1087	multi-exon	FALSE	canonical	1	67827	junction_1	55784.18801002216	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	452	1978	25.0	-8624	False	GATAAA	-17
PB.1267.1	chr10	-	4070	6	novel_not_in_catalog	IDI1	novel	3370	5	NA	NA	-7	1420	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	459494.6416568532	NA	4	1	TRUE	NA	NA	NA	C	coding	228	687	56	742	45.0	-5	True	NA	NA
PB.2755.3	chr12	+	6167	9	full-splice_match	FRS2	ENST00000549921.5	1952	9	2	-4217	-1	-601	multi-exon	FALSE	canonical	1	67827	junction_1	55784.18801002216	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	415	1941	10.0	-43	True	AATAAA	-18
PB.1267.7	chr10	-	1916	5	full-splice_match	IDI1	ENST00000381344.7	2301	5	236	149	1	-149	multi-exon	FALSE	canonical	1	305653	junction_4	373868.5750690843	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	100	786	60.0	-49	True	NA	NA
PB.1267.6	chr10	-	2526	4	novel_in_catalog	IDI1	novel	3370	5	NA	NA	-25	-118	intron_retention	FALSE	canonical	1	305653	junction_3	393378.8896581344	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-23	True	AATAAA	-21
PB.1267.5	chr10	-	3042	3	novel_in_catalog	IDI1	novel	3370	5	NA	NA	-3	-118	intron_retention	FALSE	canonical	1	305653	junction_2	124581.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-21
PB.2755.7	chr12	+	6765	9	full-splice_match	FRS2	ENST00000549921.5	1952	9	12	-4825	4	0	multi-exon	FALSE	canonical	1	67827	junction_1	55784.18801002216	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	405	1931	35.0	-33	True	AATAAA	-34
PB.2755.8	chr12	+	3678	9	full-splice_match	FRS2	ENST00000549921.5	1952	9	13	-1739	5	1739	multi-exon	FALSE	canonical	1	67827	junction_1	55784.18801002216	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	404	1930	15.0	-32	True	AATAAA	-13
PB.11185.3	chr8	-	2950	15	novel_in_catalog	STAU2	novel	2646	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	18042	junction_2	86880.45802854633	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	220	1950	10.0	-1	True	AGTAAA	-21
PB.1267.8	chr10	-	2192	4	full-splice_match	IDI1	ENST00000491735.1	1066	4	-255	-871	-188	-124	multi-exon	FALSE	canonical	1	147591	junction_3	449155.6753200634	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	7345	False	AATAAA	-15
PB.4194.1	chr16	-	2087	9	full-splice_match	PKMYT1	ENST00000262300.12	2171	9	82	2	0	0	multi-exon	TRUE	canonical	1	187652	junction_8	65966.06465057905	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	428	1927	15.0	-14	True	AATAAA	-43
PB.11185.7	chr8	-	2904	15	novel_not_in_catalog	STAU2	novel	2646	12	NA	NA	1	530	any annotated donor/acceptor	TRUE	canonical	1	40	junction_11	98967.84762216608	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	340	2058	35.0	-3	True	AATAAA	-13
PB.11185.4	chr8	-	2839	14	novel_in_catalog	STAU2	novel	2646	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	57923	junction_3	80409.40614860677	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	223	1839	10.0	-4	True	AGTAAA	-21
PB.4194.2	chr16	-	1937	9	novel_in_catalog	PKMYT1	novel	2308	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1899	junction_7	115711.43011489563	NA	1	1	TRUE	NA	NA	NA	C	coding	490	1473	306	1778	15.0	-33	True	AATAAA	-42
PB.11004.8	chr8	-	2040	3	novel_not_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	86104	-1	any annotated donor/acceptor	FALSE	canonical	1	328	junction_2	83435.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	108	327	96	422	30.0	NA	False	AATAAA	-19
PB.6921.8	chr2	-	4260	25	full-splice_match	SF3B1	ENST00000335508.10	6526	25	65	2201	1	270	multi-exon	FALSE	canonical	1	1186834	junction_14	490519.2321106714	NA	5	NA	TRUE	NA	NA	NA	C	coding	1304	3915	28	3942	30.0	1	True	AATAAA	-11
PB.11004.2	chr8	-	3857	10	novel_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	26	-1	no_combination_of_known_junctions	FALSE	canonical	1	8180	junction_7	64791.53913118329	NA	0	NA	TRUE	NA	NA	NA	B	coding	530	1593	647	2239	30.0	-9	True	AATAAA	-19
PB.11004.3	chr8	-	3835	10	novel_not_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	28	-1	any annotated donor/acceptor	FALSE	canonical	1	688	junction_7	68604.78106724012	NA	2	NA	TRUE	NA	NA	NA	B	coding	530	1593	625	2217	30.0	-3	True	AATAAA	-19
PB.11004.1	chr8	-	3882	10	novel_not_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	17	-1	any annotated donor/acceptor	FALSE	canonical	1	466	junction_9	63282.73732744437	NA	2	NA	TRUE	NA	NA	NA	B	coding	530	1593	672	2264	30.0	740	False	AATAAA	-19
PB.4077.1	chr15	+	3140	4	full-splice_match	ZNF774	ENST00000354377.7	3202	4	39	23	-19	-23	multi-exon	FALSE	canonical	1	12632	junction_1	2899.4105531220575	NA	0	NA	TRUE	NA	NA	NA	A	coding	483	1452	148	1599	20.0	0	True	TATAAA	-20
PB.5598.11	chr19	+	1983	13	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	6	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	307759.6679768859	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	144	1679	70.0	17	True	NA	NA
PB.5598.12	chr19	+	2005	12	incomplete-splice_match	THOP1	ENST00000307741.10	4804	13	77	4102	-11	-483	3prime_fragment	FALSE	canonical	1	281985	junction_1	139361.93459466234	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1878	127	2004	20.0	34	True	NA	NA
PB.5598.13	chr19	+	2334	13	novel_not_in_catalog	THOP1	novel	4804	13	NA	NA	4878	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	253883.45535155112	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1737	294	2030	70.0	4862	False	NA	NA
PB.4706.2	chr17	-	1128	6	full-splice_match	C1QBP	ENST00000225698.8	1169	6	44	-3	44	3	multi-exon	FALSE	canonical	1	1249259	junction_4	1109150.2456171392	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	39	887	10.0	-3	True	CATAAA	-23
PB.11642.6	chr9	+	2717	14	full-splice_match	SYK	ENST00000375746.1	4990	14	-85	2358	-85	-2358	multi-exon	FALSE	canonical	1	17206	junction_1	99168.86310541884	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	219	2126	85.0	-20	True	NA	NA
PB.4706.1	chr17	-	1288	6	full-splice_match	C1QBP	ENST00000225698.8	1169	6	29	-148	29	148	multi-exon	FALSE	canonical	1	1249259	junction_4	1109150.2456171392	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	54	902	25.0	-18	True	AATAAA	-21
PB.11642.7	chr9	+	2211	13	novel_in_catalog	SYK	novel	5005	14	NA	NA	-91	-2412	no_combination_of_known_junctions	FALSE	canonical	1	61	junction_1	107016.74795823108	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	262	1674	60.0	-26	True	AATAAA	-17
PB.11642.4	chr9	+	2632	14	novel_in_catalog	SYK	novel	5005	14	NA	NA	-33	-2412	combination_of_known_junctions	FALSE	canonical	1	29130	junction_1	96668.88404201734	NA	2	NA	TRUE	NA	NA	NA	C	coding	635	1908	188	2095	60.0	-84	False	AATAAA	-17
PB.6845.13	chr2	-	3820	7	novel_not_in_catalog	SP3	novel	6359	7	NA	NA	163	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	167652.06221716054	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	102	2411	15.0	1146	False	AATAAA	-21
PB.8644.1	chr4	-	2548	6	novel_not_in_catalog	ABCA11P	novel	1815	3	NA	NA	-11	481	any annotated donor/acceptor	FALSE	canonical	1	141	junction_3	85914.3328889889	NA	5	1	TRUE	NA	NA	NA	A	coding	156	471	539	1009	60.0	9	True	AATAAA	-15
PB.11642.5	chr9	+	2622	14	novel_in_catalog	SYK	novel	5005	14	NA	NA	-3	-2358	combination_of_known_junctions	FALSE	canonical	1	2782	junction_1	102243.27408297868	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	124	2031	85.0	-1	True	NA	NA
PB.3401.3	chr14	+	2957	5	full-splice_match	C14orf28	ENST00000325192.7	2915	5	-43	1	-43	0	multi-exon	FALSE	canonical	1	30469	junction_1	17014.371058020333	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	319	1251	25.0	-78	False	AATAAA	-29
PB.3401.2	chr14	+	2639	5	full-splice_match	C14orf28	ENST00000325192.7	2915	5	-60	336	-60	-335	multi-exon	FALSE	canonical	1	30469	junction_1	17014.371058020333	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	336	1268	65.0	-95	False	NA	NA
PB.3401.1	chr14	+	1546	5	full-splice_match	C14orf28	ENST00000325192.7	2915	5	-86	1455	-86	233	multi-exon	TRUE	canonical	1	30469	junction_1	17014.371058020333	NA	3	NA	TRUE	NA	NA	NA	C	coding	310	933	362	1294	15.0	-121	False	AATAAA	-14
PB.2919.10	chr12	+	1582	6	full-splice_match	OAS1	ENST00000202917.9	1816	6	206	28	10	0	multi-exon	FALSE	canonical	1	203072	junction_5	150373.73161426833	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	58	1260	70.0	10	True	NA	NA
PB.5121.2	chr17	+	1792	12	incomplete-splice_match	UTP18	ENST00000225298.11	1894	14	19	3780	19	-3725	3prime_fragment	FALSE	canonical	1	146756	junction_9	128159.9387525519	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	39	1688	20.0	-28	True	AATAAA	-13
PB.5121.3	chr17	+	1867	14	full-splice_match	UTP18	ENST00000225298.11	1894	14	23	4	23	0	multi-exon	FALSE	canonical	1	91634	junction_13	136331.73352946088	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	35	1705	35.0	-24	True	AATAAA	-21
PB.5121.1	chr17	+	1820	14	novel_in_catalog	UTP18	novel	1894	14	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	7255	junction_10	157438.54262187326	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	83	1537	35.0	-72	False	AATAAA	-21
PB.8563.31	chr3	+	5120	30	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	50683	junction_1	697139.2881505843	NA	0	NA	TRUE	NA	NA	NA	C	coding	1512	4539	140	4678	15.0	16	True	ATTAAA	-13
PB.2907.9	chr12	-	3624	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	9	-194	no_combination_of_known_junctions	FALSE	canonical	1	6515	junction_9	96717.73035922628	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	434	1765	70.0	-43	True	NA	NA
PB.763.3	chr1	+	2568	3	full-splice_match	CHTOP	ENST00000495554.1	2553	3	-16	1	10	-1	multi-exon	FALSE	canonical	1	16481	junction_2	368748.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-21	True	NA	NA
PB.2919.12	chr12	+	3311	5	full-splice_match	OAS1	ENST00000452357.6	1990	5	123	-1444	0	3	multi-exon	FALSE	canonical	1	421190	junction_3	73874.2421162478	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	68	1162	20.0	0	True	NA	NA
PB.763.6	chr1	+	1982	2	incomplete-splice_match	CHTOP	ENST00000495554.1	2553	3	-9	7195	-9	-6110	3prime_fragment	FALSE	canonical	1	753978	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-14	True	AATAAA	-32
PB.763.7	chr1	+	3244	5	novel_in_catalog	CHTOP	novel	1840	4	NA	NA	-8	358	intron_retention	FALSE	canonical	1	424822	junction_2	121274.11574713707	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	2011	2685	40.0	-13	True	AGTAAA	-18
PB.2907.3	chr12	-	3848	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	15	-1	no_combination_of_known_junctions	FALSE	canonical	1	3765	junction_10	95316.06781146607	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	180	1796	20.0	-37	True	ATTAAA	-20
PB.2907.2	chr12	-	3905	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	16	-1	no_combination_of_known_junctions	FALSE	canonical	1	768	junction_1	94843.14961113429	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	179	1633	20.0	-36	True	ATTAAA	-20
PB.2907.1	chr12	-	4009	12	full-splice_match	BRAP	ENST00000419234.8	4026	12	16	1	16	-1	multi-exon	FALSE	canonical	1	139646	junction_11	66286.15988934669	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	179	1957	20.0	-36	True	ATTAAA	-20
PB.11642.1	chr9	+	2646	14	full-splice_match	SYK	ENST00000375754.8	5005	14	1	2358	1	-2358	multi-exon	FALSE	canonical	1	147916	junction_1	74633.00885615611	NA	3	NA	TRUE	NA	NA	NA	C	coding	635	1908	148	2055	85.0	-31	True	NA	NA
PB.2907.7	chr12	-	3809	12	full-splice_match	BRAP	ENST00000419234.8	4026	12	25	192	25	-192	multi-exon	FALSE	canonical	1	139646	junction_11	66286.15988934669	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	170	1948	70.0	-27	True	NA	NA
PB.2907.6	chr12	-	3636	10	novel_in_catalog	BRAP	novel	4026	12	NA	NA	23	-6	no_combination_of_known_junctions	FALSE	canonical	1	2952	junction_9	97702.92412066486	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	258	1589	20.0	-29	True	ATTAAA	-15
PB.2907.5	chr12	-	3770	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	51	-6	no_combination_of_known_junctions	FALSE	canonical	1	6515	junction_9	96717.73035922628	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	392	1723	20.0	-1	True	ATTAAA	-15
PB.2907.4	chr12	-	3725	10	novel_in_catalog	BRAP	novel	4026	12	NA	NA	51	-1	no_combination_of_known_junctions	FALSE	canonical	1	3049	junction_3	88031.85038228148	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	144	1673	20.0	-1	True	ATTAAA	-20
PB.8955.12	chr4	+	2469	15	novel_in_catalog	USP53	novel	4233	2	NA	NA	-33	-3402	no_combination_of_known_junctions	FALSE	canonical	1	24449	junction_2	47537.30107386993	NA	0	NA	TRUE	NA	NA	NA	B	coding	658	1974	495	2468	60.0	-5	True	TATAAA	-32
PB.1557.9	chr10	+	2058	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	-16	7564	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	130464.84399254843	NA	25	2	TRUE	NA	NA	NA	C	coding	438	1317	98	1414	40.0	-448	False	AATAAA	-10
PB.8955.10	chr4	+	5662	18	novel_in_catalog	USP53	novel	4233	2	NA	NA	33	-11	no_combination_of_known_junctions	FALSE	canonical	1	41325	junction_1	48781.19887527717	NA	9	1	TRUE	NA	NA	NA	B	coding	1073	3222	1025	4246	20.0	0	True	AATAAA	-11
PB.8955.11	chr4	+	4927	17	novel_in_catalog	USP53	novel	4233	2	NA	NA	51	-11	no_combination_of_known_junctions	FALSE	canonical	1	2940	junction_3	55396.736331516804	NA	6	NA	TRUE	NA	NA	NA	B	coding	957	2874	638	3511	20.0	-637	False	AATAAA	-11
PB.8955.14	chr4	+	4484	16	novel_in_catalog	USP53	novel	4233	2	NA	NA	-28	-306	no_combination_of_known_junctions	FALSE	canonical	1	24449	junction_2	46071.53729273157	NA	2	1	TRUE	NA	NA	NA	B	coding	957	2874	490	3363	15.0	0	True	AATAAA	-12
PB.1557.8	chr10	+	3637	9	full-splice_match	ENTPD1	ENST00000639992.1	1830	9	-19	-1788	-16	-1154	multi-exon	FALSE	canonical	1	16465	junction_3	111599.00971866865	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	361	1479	25.0	-448	False	AATAAA	-19
PB.7050.1	chr2	+	2373	13	full-splice_match	AGFG1	ENST00000310078.12	8668	13	179	6116	-28	186	multi-exon	FALSE	canonical	1	362496	junction_1	136453.94323045007	NA	2	1	TRUE	NA	NA	NA	A	coding	562	1689	82	1770	75.0	3	True	AATAAA	-32
PB.1277.1	chr10	+	5776	9	incomplete-splice_match	FAM208B	ENST00000645567.1	8732	24	47571	-3	9725	3	5prime_fragment	FALSE	canonical	1	204986	junction_1	83493.88780015202	NA	0	NA	TRUE	NA	NA	NA	B	coding	1636	4911	167	5077	35.0	NA	False	AATAAA	-7
PB.11528.2	chr9	-	2720	16	novel_not_in_catalog	GBA2	novel	3611	17	NA	NA	-280	0	any annotated donor/acceptor	TRUE	canonical	1	688	junction_12	167777.16573948113	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	842	1687	20.0	9694	False	AATAAA	-15
PB.8614.1	chr3	-	3981	15	novel_in_catalog	TNK2	novel	2641	7	NA	NA	9	0	intron_retention	FALSE	canonical	1	6721	junction_14	144085.33899552055	NA	3	1	TRUE	NA	NA	NA	B	coding	1038	3117	49	3165	10.0	-1	True	AATAAA	-21
PB.8513.9	chr3	-	4046	15	full-splice_match	PHC3	ENST00000495893.6	12666	15	1	8619	-1	-982	multi-exon	FALSE	canonical	1	110362	junction_14	52892.59553446445	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	32	3019	75.0	-14	True	NA	NA
PB.11750.1	chr9	+	3055	2	full-splice_match	TRIM32	ENST00000373983.2	3688	2	-24	657	4	-655	multi-exon	FALSE	canonical	1	56470	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	155	2116	10.0	-31	True	ACTAAA	-16
PB.8271.3	chr3	+	2250	4	novel_in_catalog	PCNP	novel	2342	5	NA	NA	8	71	no_combination_of_known_junctions	FALSE	canonical	1	14431	junction_3	352062.26434570097	NA	3	NA	TRUE	NA	NA	NA	C	coding	130	393	15	407	15.0	22	True	TTTAAA	-16
PB.9741.1	chr6	-	1800	7	novel_not_in_catalog	ADTRP	novel	687	5	NA	NA	-8283	-2	any annotated donor/acceptor	FALSE	canonical	1	1473	junction_6	24493.109299125106	NA	3	NA	TRUE	NA	NA	NA	A	coding	230	693	307	999	35.0	-11	False	AATAAA	-11
PB.3415.1	chr14	+	2632	13	full-splice_match	KLHDC1	ENST00000359332.6	2691	13	51	8	27	-8	multi-exon	FALSE	canonical	1	13836	junction_1	10978.401058695004	NA	0	NA	TRUE	NA	NA	NA	A	coding	406	1221	40	1260	45.0	-4	True	NA	NA
PB.279.10	chr1	-	3815	19	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	340	junction_16	116719.39414549475	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	951	3026	100.0	-1	True	NA	NA
PB.279.11	chr1	-	3640	20	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24291	junction_18	108138.18477523095	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	776	2851	100.0	-1	True	NA	NA
PB.9825.10	chr6	-	3571	4	incomplete-splice_match	ZSCAN12	ENST00000396827.3	3909	6	-91	9734	-88	-9734	3prime_fragment	FALSE	canonical	1	55964	junction_2	5304.507663822869	NA	4	NA	TRUE	NA	NA	NA	C	coding	611	1836	235	2070	20.0	-50	False	AGTAAA	-18
PB.279.17	chr1	-	2124	13	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	28570	junction_12	98796.10731816421	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2055	70	2124	30.0	0	True	NA	NA
PB.12361.1	chrX	+	1727	1	full-splice_match	F8A1	ENST00000610495.1	1713	1	-15	1	-15	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	371	1116	42	1157	5.0	317	False	GATAAA	-19
PB.279.15	chr1	-	3845	21	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	0	-164	combination_of_known_junctions	FALSE	canonical	1	28570	junction_20	95179.39027074087	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	71	3220	85.0	-1	True	NA	NA
PB.8644.2	chr4	-	4691	3	full-splice_match	ZNF721	ENST00000505900.1	664	3	15	-4042	-10	-53	multi-exon	FALSE	canonical	1	135609	junction_1	50324.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	955	2868	170	3037	40.0	-3	True	AATAAA	-25
PB.5439.2	chr18	+	2833	8	full-splice_match	RNF138	ENST00000261593.7	3570	8	7	730	7	116	multi-exon	FALSE	canonical	1	55586	junction_3	42399.456749985344	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	452	1189	30.0	-40	True	AAGAAA	-39
PB.5304.8	chr17	-	2644	8	novel_not_in_catalog	SGSH	novel	565	3	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	2011	junction_1	86426.19705333585	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	26	1216	25.0	-6	True	AGTAAA	-9
PB.190.4	chr1	-	2193	9	novel_in_catalog	PAFAH2	novel	3581	11	NA	NA	-21	-54	combination_of_known_junctions	TRUE	canonical	1	5384	junction_7	49226.93816334203	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	213	1028	95.0	-15	True	NA	NA
PB.5439.4	chr18	+	2519	8	full-splice_match	RNF138	ENST00000261593.7	3570	8	15	1036	-14	-190	multi-exon	FALSE	canonical	1	55586	junction_3	42399.456749985344	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	444	1181	25.0	-32	True	AATAAA	-35
PB.190.1	chr1	-	3485	11	full-splice_match	PAFAH2	ENST00000374282.7	3581	11	94	2	-7	-2	multi-exon	FALSE	canonical	1	28346	junction_10	36915.47069400579	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	87	1265	20.0	-1	True	NA	NA
PB.190.2	chr1	-	2882	12	novel_not_in_catalog	PAFAH2	novel	3581	11	NA	NA	-21	-54	any annotated donor/acceptor	FALSE	canonical	1	44	junction_11	48869.43200792147	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	467	1717	95.0	-15	True	NA	NA
PB.5439.5	chr18	+	3213	5	novel_in_catalog	AC011825.3	novel	565	5	NA	NA	73043	19781	no_combination_of_known_junctions	FALSE	canonical	1	1454	junction_2	68814.68932348311	NA	0	NA	TRUE	NA	NA	NA	B	coding	132	399	442	840	35.0	-30	True	ATTAAA	-15
PB.5439.6	chr18	+	2648	7	novel_in_catalog	AC011825.3	novel	565	5	NA	NA	73045	18936	no_combination_of_known_junctions	FALSE	canonical	1	12559	junction_4	57403.71204799293	NA	0	NA	TRUE	NA	NA	NA	B	coding	226	681	440	1120	40.0	-28	True	AATAAA	-15
PB.6822.4	chr2	+	2687	14	full-splice_match	PPIG	ENST00000260970.7	6368	14	12	3669	-1	26	multi-exon	FALSE	canonical	1	215149	junction_1	96492.30853972478	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	209	2473	40.0	1	True	AATAAA	-12
PB.581.2	chr1	-	3154	10	full-splice_match	SLC25A24	ENST00000565488.5	4271	10	326	791	247	-4	multi-exon	FALSE	canonical	1	267029	junction_8	57962.1052255078	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	135	1328	30.0	839	False	AATATA	-12
PB.5439.7	chr18	+	2429	6	novel_in_catalog	AC011825.3	novel	565	5	NA	NA	73045	18942	no_combination_of_known_junctions	FALSE	canonical	1	27321	junction_2	53900.63555840506	NA	1	NA	TRUE	NA	NA	NA	B	coding	151	456	440	895	30.0	-28	True	AATAAA	-21
PB.581.3	chr1	-	3368	10	novel_not_in_catalog	SLC25A24	novel	4271	10	NA	NA	8	-4	any annotated donor/acceptor	FALSE	canonical	1	9002	junction_1	120922.57008434144	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	134	1366	30.0	-25	True	AATATA	-12
PB.8467.10	chr3	+	1984	13	novel_in_catalog	EIF2A	novel	565	3	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	9172	junction_10	385273.18121352396	NA	14	1	TRUE	NA	NA	NA	C	coding	547	1644	11	1654	30.0	6	True	AATGAA	-20
PB.3151.19	chr13	-	3587	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1280714.3164511246	NA	2	NA	TRUE	NA	NA	NA	C	coding	627	1884	83	1966	10.0	0	True	AATAAA	-14
PB.3151.18	chr13	-	3562	15	novel_in_catalog	LCP1	novel	3944	19	NA	NA	30	-2	no_combination_of_known_junctions	FALSE	canonical	1	179	junction_5	1121734.4338590514	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	89	1336	10.0	0	True	AATAAA	-14
PB.8883.6	chr4	-	1252	6	full-splice_match	SNCA	ENST00000394991.7	1290	6	31	7	2	-7	multi-exon	FALSE	canonical	1	580371	junction_5	491694.25324467645	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	262	684	40.0	-37	True	AATAAA	-16
PB.3151.17	chr13	-	3826	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	229	-2	any annotated donor/acceptor	FALSE	canonical	1	485	junction_16	1300035.055163356	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	274	2157	10.0	685	False	AATAAA	-14
PB.238.6	chr1	-	2993	7	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-31	0	intron_retention	FALSE	canonical	1	2581063	junction_6	700598.6293760184	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	1059	1634	5.0	-3	True	AATAAA	-16
PB.3151.11	chr13	-	3721	16	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	283	junction_14	1103677.031395258	NA	3	NA	TRUE	NA	NA	NA	C	coding	570	1713	339	2051	15.0	455	False	AATAAA	-15
PB.3151.10	chr13	-	3717	16	novel_in_catalog	LCP1	novel	3944	19	NA	NA	-142	-55	combination_of_known_junctions	FALSE	canonical	1	137766	junction_15	1022594.9473489143	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	224	2107	75.0	-87	False	AAGAAA	-16
PB.3151.12	chr13	-	3704	16	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	34	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1103980.570912542	NA	15	NA	TRUE	NA	NA	NA	C	coding	649	1950	85	2034	15.0	4	True	AATAAA	-15
PB.841.17	chr1	+	3976	11	incomplete-splice_match	IFI16	ENST00000295809.11	2867	12	-20	7	-11	0	intron_retention	FALSE	canonical	1	316112	junction_8	233483.42159768005	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2292	276	2567	35.0	-20	True	AATAAA	-21
PB.290.17	chr1	+	2968	3	novel_in_catalog	THRAP3	novel	4432	12	NA	NA	11	-5064	intron_retention	FALSE	canonical	1	48940	junction_1	344040.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	94	1179	65.0	-10	True	NA	NA
PB.841.15	chr1	+	2500	11	full-splice_match	IFI16	ENST00000368132.7	2704	11	201	3	109	0	multi-exon	FALSE	canonical	1	295	junction_7	338257.7347500128	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	64	2253	35.0	-8188	False	AATAAA	-21
PB.8002.2	chr3	+	2139	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	-12	4503	-12	112	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	112	1317	20.0	-16	True	NA	NA
PB.841.13	chr1	+	2715	11	incomplete-splice_match	IFI16	ENST00000295809.11	2867	12	-6	1254	3	-1223	3prime_fragment	FALSE	canonical	1	316112	junction_8	233483.42159768005	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	262	2553	70.0	-6	True	TTTAAA	-20
PB.841.12	chr1	+	1436	6	incomplete-splice_match	IFI16	ENST00000368132.7	2704	11	-11	34622	-11	0	3prime_fragment	FALSE	canonical	1	882902	junction_1	93350.10300026454	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1161	276	1436	55.0	-20	True	NA	NA
PB.841.11	chr1	+	4087	9	novel_in_catalog	IFI16	novel	856	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	196353	junction_6	306435.30309366994	NA	3	1	TRUE	NA	NA	NA	C	coding	451	1356	2485	3840	35.0	0	True	AATAAA	-21
PB.841.10	chr1	+	4804	9	novel_in_catalog	IFI16	novel	856	3	NA	NA	-8	-4	intron_retention	FALSE	canonical	1	295	junction_5	370850.0384671807	NA	3	1	TRUE	NA	NA	NA	C	coding	507	1524	3038	4561	25.0	-8423	False	AATAAA	-17
PB.8850.1	chr4	-	2577	8	full-splice_match	TMEM150C	ENST00000449862.6	1990	8	197	-784	-39	-636	multi-exon	TRUE	canonical	1	33625	junction_7	14697.471626238357	NA	1	NA	TRUE	NA	NA	NA	A	coding	249	750	123	872	90.0	1	True	NA	NA
PB.841.19	chr1	+	2680	12	full-splice_match	IFI16	ENST00000295809.11	2867	12	184	3	101	-1	multi-exon	FALSE	canonical	1	316112	junction_8	244872.14013254124	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	72	2429	20.0	-8196	False	AATAAA	-25
PB.841.18	chr1	+	3378	4	incomplete-splice_match	IFI16	ENST00000447473.6	951	5	912	-2562	-11	878	5prime_fragment	FALSE	canonical	1	882902	junction_1	60095.51466531333	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	276	899	85.0	-20	True	NA	NA
PB.1240.20	chr1	-	3064	14	full-splice_match	HNRNPU	ENST00000444376.7	6827	14	398	3365	-71	28	multi-exon	FALSE	canonical	1	1037046	junction_1	1614879.0492050434	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	12	2276	30.0	407	False	ATTAAA	-12
PB.10668.9	chr7	-	3485	19	full-splice_match	KRIT1	ENST00000394505.6	3143	19	0	-342	0	162	multi-exon	FALSE	canonical	1	39672	junction_18	84468.76727029688	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	555	2765	40.0	-10	True	AATAAA	-21
PB.8883.7	chr4	-	1185	6	full-splice_match	SNCA	ENST00000394986.5	1420	6	150	85	-13	-85	multi-exon	FALSE	canonical	1	96737	junction_5	640998.4869789943	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	273	695	15.0	-17	True	TATAAA	-18
PB.2262.9	chr11	+	2170	18	incomplete-splice_match	CUL5	ENST00000531427.5	3596	20	68	8322	68	-8322	3prime_fragment	FALSE	canonical	1	156600	junction_3	40398.633478464784	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2148	22	2169	30.0	-9	True	AATGAA	-35
PB.2262.8	chr11	+	3246	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	165	2940	-22	-2016	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	452	2794	10.0	-21	True	ATTAAA	-13
PB.2262.7	chr11	+	6177	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	165	9	-22	-9	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	1	NA	TRUE	NA	NA	NA	C	coding	780	2343	452	2794	40.0	-21	True	AATAAA	-21
PB.2262.6	chr11	+	2718	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	164	3469	-23	-2545	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2265	453	2717	45.0	-22	True	GATAAA	-6
PB.2262.5	chr11	+	3230	19	novel_in_catalog	CUL5	novel	6351	19	NA	NA	-23	-16	no_combination_of_known_junctions	FALSE	canonical	1	10528	junction_18	63028.10921728632	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	453	2681	85.0	-22	True	AAGAAA	-18
PB.2262.4	chr11	+	3420	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	164	2767	-23	-1843	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	453	2795	20.0	-22	True	ATTAAA	-16
PB.2262.3	chr11	+	4022	29	novel_in_catalog	CUL5	novel	6351	19	NA	NA	-24	39823	no_combination_of_known_junctions	FALSE	canonical	1	2543	junction_18	468283.6801775243	NA	0	NA	TRUE	NA	NA	NA	C	coding	1119	3360	454	3813	35.0	-23	True	AATAAA	-33
PB.5215.2	chr17	+	3356	3	full-splice_match	SOX9	ENST00000245479.2	3935	3	0	579	0	-579	multi-exon	FALSE	canonical	1	354370	junction_1	24640.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	373	1902	25.0	0	True	TATAAA	-23
PB.2262.1	chr11	+	3993	20	full-splice_match	CUL5	ENST00000531427.5	3596	20	-417	20	-77	-20	multi-exon	FALSE	canonical	1	9342	junction_19	61715.19228119369	NA	7	NA	TRUE	NA	NA	NA	C	coding	780	2343	507	2849	80.0	-494	False	AAGAAA	-14
PB.10668.2	chr7	-	4079	19	full-splice_match	KRIT1	ENST00000394505.6	3143	19	3	-939	0	-6	multi-exon	FALSE	canonical	1	39672	junction_18	84468.76727029688	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	552	2762	50.0	-7	True	AATAAA	-13
PB.12117.2	chrX	+	3927	13	full-splice_match	MSN	ENST00000360270.6	3944	13	17	0	17	0	multi-exon	FALSE	canonical	1	425017	junction_2	545890.7030594014	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	156	1889	20.0	-49	False	AATAAA	-17
PB.8562.5	chr3	+	2685	20	novel_in_catalog	PSMD2	novel	3449	21	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	7347	junction_4	487533.11914709024	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	27	2528	10.0	-10	True	AATAAA	-13
PB.8591.2	chr3	+	6301	11	novel_not_in_catalog	LPP	novel	5835	7	NA	NA	246	-11927	any annotated donor/acceptor	FALSE	canonical	1	21835	junction_1	63869.28526764645	NA	1	NA	TRUE	NA	NA	NA	B	coding	612	1839	198	2036	80.0	-21	False	AATATA	-7
PB.12117.3	chrX	+	4299	13	novel_not_in_catalog	MSN	novel	568	4	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	canonical	1	2950	junction_8	626616.4402232039	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	190	1254	25.0	-1	True	AATAAA	-16
PB.7574.2	chr21	+	2453	4	novel_in_catalog	MCM3AP-AS1	novel	703	3	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	1	5380	junction_3	3389.2621615921066	NA	2	NA	TRUE	NA	NA	NA	C	coding	122	369	410	778	90.0	-21	True	NA	NA
PB.8591.3	chr3	+	3755	11	novel_not_in_catalog	LPP	novel	5835	7	NA	NA	250	9893	any annotated donor/acceptor	FALSE	canonical	1	21835	junction_1	63869.28526764645	NA	2	NA	TRUE	NA	NA	NA	B	coding	612	1839	194	2032	35.0	-17	False	AATAAA	-28
PB.7574.3	chr21	+	2299	3	full-splice_match	MCM3AP-AS1	ENST00000432735.5	2302	3	-11	14	-2	-14	multi-exon	FALSE	canonical	1	11824	junction_1	655.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-8	True	GATAAA	-27
PB.4524.8	chr16	+	2525	10	novel_in_catalog	WWP2	novel	4515	24	NA	NA	10	3	combination_of_known_junctions	FALSE	canonical	1	39604	junction_1	94527.73046448028	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	119	1126	30.0	10	True	NA	NA
PB.4524.9	chr16	+	4682	23	novel_in_catalog	WWP2	novel	4515	24	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	80197	junction_1	76232.49523749237	NA	2	1	TRUE	NA	NA	NA	C	coding	338	1017	1869	2885	0.0	24	True	AATAAA	-12
PB.12117.1	chrX	+	2205	1	novel_in_catalog	MSN	novel	568	4	NA	NA	-49	43960	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-3	True	NA	NA
PB.175.1	chr1	+	3676	11	novel_in_catalog	NIPAL3	novel	1711	12	NA	NA	-44	-1398	no_combination_of_known_junctions	FALSE	canonical	1	7921	junction_1	86501.70154887128	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	66	1283	100.0	-108	False	NA	NA
PB.4524.1	chr16	+	4673	26	novel_not_in_catalog	WWP2	novel	4515	24	NA	NA	-8	0	any annotated donor/acceptor	TRUE	canonical	1	3119	junction_2	102830.47772588827	NA	12	NA	TRUE	NA	NA	NA	C	coding	870	2613	260	2872	5.0	-34	False	AATAAA	-16
PB.4524.2	chr16	+	4576	25	novel_in_catalog	WWP2	novel	4515	24	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	39604	junction_1	88552.79587709832	NA	2	NA	TRUE	NA	NA	NA	C	coding	870	2613	163	2775	5.0	-34	False	AATAAA	-16
PB.4524.3	chr16	+	2500	9	incomplete-splice_match	WWP2	ENST00000359154.6	4515	24	8	31488	8	3	3prime_fragment	FALSE	canonical	1	80197	junction_1	70736.85423443974	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	94	1101	30.0	-18	True	NA	NA
PB.4524.4	chr16	+	4674	26	novel_in_catalog	WWP2	novel	4515	24	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	11140	junction_2	102083.5869169966	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	263	2875	5.0	-13	True	AATAAA	-14
PB.4524.5	chr16	+	1991	10	novel_not_in_catalog	WWP2	novel	4515	24	NA	NA	-4	-543	any annotated donor/acceptor	FALSE	canonical	1	1291	junction_1	108495.18041523012	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	131	1138	85.0	-8	True	AATGAA	-35
PB.4524.6	chr16	+	1944	9	incomplete-splice_match	WWP2	ENST00000359154.6	4515	24	18	32034	-4	-543	3prime_fragment	FALSE	canonical	1	80197	junction_1	70736.85423443974	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	84	1091	85.0	-8	True	AATGAA	-35
PB.12117.7	chrX	+	2201	2	incomplete-splice_match	MSN	ENST00000360270.6	3944	13	-16	23113	-16	-10771	3prime_fragment	FALSE	canonical	1	622280	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.11550.4	chr9	-	1759	4	novel_in_catalog	AL138752.2	novel	2591	12	NA	NA	164981	-290989	no_combination_of_known_junctions	FALSE	canonical	1	25636	junction_3	26479.01886819491	NA	2	NA	TRUE	NA	NA	NA	B	coding	102	309	1212	1520	40.0	11	True	AATAAA	-16
PB.11550.5	chr9	-	1641	4	full-splice_match	SLC25A51	ENST00000496760.5	1871	4	227	3	7	-3	multi-exon	FALSE	canonical	1	58157	junction_1	22908.1270052549	NA	0	NA	TRUE	NA	NA	NA	A	coding	102	309	1095	1403	45.0	0	True	AATAAA	-15
PB.8332.3	chr3	-	3755	16	incomplete-splice_match	POLQ	ENST00000264233.5	8775	30	0	57874	0	32266	3prime_fragment	FALSE	canonical	1	34479	junction_9	6967.050890840081	NA	1	NA	TRUE	NA	NA	NA	C	coding	1208	3624	130	3753	65.0	0	True	NA	NA
PB.11550.7	chr9	-	3723	4	novel_not_in_catalog	AL138752.2	novel	2591	12	NA	NA	164334	-294977	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	37406.42012928916	NA	12	2	TRUE	NA	NA	NA	B	coding	297	894	235	1128	25.0	-1	True	AATAAA	-16
PB.1269.1	chr10	+	4550	14	novel_in_catalog	WDR37	novel	4582	14	NA	NA	-64	10	no_combination_of_known_junctions	FALSE	canonical	1	52311	junction_1	49435.56243238178	NA	2	NA	TRUE	NA	NA	NA	B	coding	454	1365	350	1714	20.0	-16	True	ATTAAA	-42
PB.11550.2	chr9	-	2368	4	novel_not_in_catalog	AL138752.2	novel	2591	12	NA	NA	164560	-270006	intron_retention	FALSE	canonical	1	3997	junction_1	47312.03603735523	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-18
PB.1269.2	chr10	+	4446	14	novel_not_in_catalog	WDR37	novel	4582	14	NA	NA	-64	-5	any annotated donor/acceptor	FALSE	canonical	1	11664	junction_1	55600.574399995785	NA	1	NA	TRUE	NA	NA	NA	B	coding	495	1488	138	1625	25.0	-16	True	ATTAAA	-27
PB.12117.5	chrX	+	3861	12	novel_in_catalog	MSN	novel	568	4	NA	NA	-14	-1	no_combination_of_known_junctions	FALSE	canonical	1	16630	junction_2	637936.0798856738	NA	10	1	TRUE	NA	NA	NA	C	coding	545	1638	187	1824	25.0	2	True	AATAAA	-16
PB.465.60	chr1	-	1358	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	4	741	4	90	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	96	1277	80.0	22	False	NA	NA
PB.9570.1	chr5	-	3615	18	full-splice_match	TNIP1	ENST00000315050.11	2785	18	-2	-828	-2	824	multi-exon	TRUE	canonical	1	144529	junction_17	483128.31896438176	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	113	2023	35.0	-1	True	NA	NA
PB.9570.2	chr5	-	2746	18	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	58177	junction_2	606575.4606420093	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	120	1979	20.0	-8	True	CATAAA	-26
PB.9570.3	chr5	-	2836	18	full-splice_match	TNIP1	ENST00000521591.5	2274	18	63	-625	4	5	multi-exon	FALSE	canonical	1	389360	junction_17	451522.50849327794	NA	2	1	TRUE	NA	NA	NA	C	coding	636	1911	169	2079	45.0	-6	True	CATAAA	-10
PB.9570.4	chr5	-	3080	19	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	297	junction_12	620134.158951122	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	1208	2314	30.0	-8	True	CATAAA	-19
PB.9570.5	chr5	-	3113	18	full-splice_match	TNIP1	ENST00000315050.11	2785	18	-335	7	167	5	multi-exon	FALSE	canonical	1	144529	junction_17	483128.31896438176	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	446	2356	45.0	9820	False	CATAAA	-10
PB.9570.6	chr5	-	2888	18	full-splice_match	TNIP1	ENST00000389378.6	2935	18	47	0	-3	0	multi-exon	FALSE	canonical	1	58177	junction_2	522970.1895752045	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	195	2054	30.0	-32	True	CATAAA	-19
PB.9570.7	chr5	-	2623	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	64815	junction_16	497569.3617020897	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	106	1857	30.0	-7	True	CATAAA	-19
PB.9570.8	chr5	-	2873	19	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	3970	junction_17	568984.676115065	NA	3	NA	TRUE	NA	NA	NA	C	coding	636	1911	197	2107	30.0	2	True	CATAAA	-19
PB.9570.9	chr5	-	2818	18	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	58177	junction_2	583871.2426576557	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	199	2058	30.0	-36	True	CATAAA	-19
PB.10351.4	chr7	+	2352	8	incomplete-splice_match	DNAAF5	ENST00000297440.10	3410	13	422	21530	-96	-8030	3prime_fragment	FALSE	canonical	1	103029	junction_4	67439.91192558463	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	205	1479	75.0	-5343	False	NA	NA
PB.9579.28	chr5	+	2443	12	novel_in_catalog	G3BP1	novel	535	4	NA	NA	-11	458	combination_of_known_junctions	FALSE	canonical	1	27835	junction_1	357150.27988368104	NA	3	NA	TRUE	NA	NA	NA	C	coding	466	1401	451	1851	60.0	-4647	False	AATAAA	-33
PB.10979.2	chr8	-	2160	3	novel_not_in_catalog	PRSS51	novel	1123	5	NA	NA	-14002	1585	any annotated donor/acceptor	FALSE	canonical	1	84	junction_1	1220.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-14	False	AATAAA	-15
PB.3214.1	chr13	-	2554	4	intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1175	junction_1	3531.4768393218533	NA	0	NA	FALSE	NA	NA	NA	A	coding	107	324	157	480	50.0	7	False	AATAAA	-12
PB.9322.7	chr5	+	2417	18	novel_not_in_catalog	MSH3	novel	4092	24	NA	NA	0	26062	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	49635.96984879464	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2373	43	2415	25.0	0	True	NA	NA
PB.9322.6	chr5	+	4092	24	full-splice_match	MSH3	ENST00000265081.6	4092	24	3	-3	3	3	multi-exon	FALSE	non_canonical	0	0	junction_6	48370.88010171765	NA	4	NA	TRUE	NA	NA	NA	C	coding	1137	3414	78	3491	65.0	-1	True	NA	NA
PB.9322.5	chr5	+	4277	24	full-splice_match	MSH3	ENST00000265081.6	4092	24	-17	-168	-17	168	multi-exon	FALSE	non_canonical	0	0	junction_6	48370.88010171765	NA	2	NA	TRUE	NA	NA	NA	C	coding	1137	3414	98	3511	95.0	-521	False	NA	NA
PB.9322.4	chr5	+	2277	15	incomplete-splice_match	MSH3	ENST00000265081.6	4092	24	4	107509	4	7341	3prime_fragment	FALSE	non_canonical	0	0	junction_6	44136.69706631285	NA	2	NA	TRUE	NA	NA	NA	C	coding	733	2199	77	2275	60.0	0	True	AAGAAA	-5
PB.9322.3	chr5	+	3507	24	full-splice_match	MSH3	ENST00000265081.6	4092	24	6	579	6	-579	multi-exon	FALSE	non_canonical	0	0	junction_6	48370.88010171765	NA	2	NA	TRUE	NA	NA	NA	C	coding	1137	3414	75	3488	65.0	2	True	ATTAAA	-19
PB.9322.2	chr5	+	4439	24	full-splice_match	MSH3	ENST00000265081.6	4092	24	6	-353	6	353	multi-exon	FALSE	non_canonical	0	0	junction_6	48370.88010171765	NA	3	NA	TRUE	NA	NA	NA	C	coding	1137	3414	75	3488	25.0	2	True	AATAAA	-21
PB.9322.1	chr5	+	2648	18	incomplete-splice_match	MSH3	ENST00000265081.6	4092	24	-25	88788	-25	26062	3prime_fragment	FALSE	non_canonical	0	0	junction_6	44682.00190357105	NA	4	NA	TRUE	NA	NA	NA	C	coding	847	2541	106	2646	25.0	-529	False	NA	NA
PB.5063.12	chr17	+	3290	6	full-splice_match	GOSR2	ENST00000640051.1	3964	6	14	660	3	4	multi-exon	FALSE	canonical	1	434971	junction_2	40245.6637992219	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	52	690	50.0	-18	True	AATAAA	-22
PB.11092.8	chr8	+	2613	18	full-splice_match	DDHD2	ENST00000397166.6	4921	18	289	2019	-39	1	multi-exon	FALSE	canonical	1	97911	junction_1	87955.87094076266	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	237	2372	5.0	24	True	TATAAA	-22
PB.11179.3	chr8	-	4007	18	novel_in_catalog	EYA1	novel	3907	17	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	1	10149	junction_13	11770.875152454522	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	327	2102	20.0	1589	False	AATAAA	-21
PB.11179.2	chr8	-	3762	18	novel_in_catalog	EYA1	novel	3907	17	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	1	15137	junction_12	10956.115831700898	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	94	1857	20.0	1822	False	AATAAA	-21
PB.11378.2	chr8	-	2603	12	novel_in_catalog	EEF1D	novel	1458	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	3995	junction_9	1480523.5658443032	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	596	2539	0.0	1	True	ATTAAA	-14
PB.11378.3	chr8	-	2205	10	full-splice_match	EEF1D	ENST00000442189.6	2207	10	2	0	0	0	multi-exon	FALSE	canonical	1	23201	junction_9	1427379.554142805	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	198	2141	0.0	1	True	ATTAAA	-14
PB.9579.29	chr5	+	9108	12	novel_in_catalog	G3BP1	novel	535	4	NA	NA	-9	-1435	combination_of_known_junctions	FALSE	canonical	1	27835	junction_1	357150.27988368104	NA	3	NA	TRUE	NA	NA	NA	C	coding	466	1401	449	1849	40.0	-4645	False	NA	NA
PB.11179.6	chr8	-	3494	18	full-splice_match	EYA1	ENST00000644427.1	4160	18	-48	714	22	14	multi-exon	FALSE	canonical	1	18100	junction_17	9476.162537805405	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	529	2301	30.0	1393	False	AATAAA	-23
PB.10870.1	chr7	-	3226	1	novel_in_catalog	DGKI	novel	12928	33	NA	NA	162	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	5	True	ATTAAA	-13
PB.8458.15	chr3	-	5142	25	full-splice_match	HLTF	ENST00000310053.9	5317	25	21	154	-4	-154	multi-exon	FALSE	canonical	1	179363	junction_13	47611.726094447666	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	174	3203	35.0	0	True	TATAAA	-16
PB.5516.8	chr18	-	3104	13	novel_in_catalog	CDH19	novel	6341	12	NA	NA	2	349	combination_of_known_junctions	FALSE	canonical	1	534	junction_12	5693.680928962681	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	437	2755	65.0	0	True	AGTAAA	-14
PB.5516.9	chr18	-	2960	12	full-splice_match	CDH19	ENST00000262150.6	6341	12	1	3380	1	349	multi-exon	FALSE	canonical	1	3685	junction_1	3526.0516794682676	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	293	2611	65.0	-1	True	AGTAAA	-14
PB.467.20	chr1	-	1699	4	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1324	-2875	any annotated donor/acceptor	FALSE	canonical	1	29156	junction_3	295486.92491922923	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	22	True	NA	NA
PB.467.21	chr1	-	1530	4	full-splice_match	GNG12	ENST00000370982.3	4404	4	0	2874	0	-2874	multi-exon	FALSE	canonical	1	161296	junction_3	234357.46866319882	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.5516.4	chr18	-	3255	13	novel_in_catalog	CDH19	novel	6341	12	NA	NA	1	499	combination_of_known_junctions	FALSE	canonical	1	534	junction_12	5693.680928962681	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	438	2756	100.0	-1	True	NA	NA
PB.5516.5	chr18	-	3080	12	full-splice_match	CDH19	ENST00000262150.6	6341	12	30	3231	-16	498	multi-exon	FALSE	canonical	1	3685	junction_1	3526.0516794682676	NA	17	NA	TRUE	NA	NA	NA	C	coding	772	2319	264	2582	95.0	5	True	NA	NA
PB.5516.6	chr18	-	3061	12	novel_not_in_catalog	CDH19	novel	6341	12	NA	NA	2	499	any annotated donor/acceptor	FALSE	canonical	1	513	junction_2	4998.477845990667	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	292	2562	100.0	0	True	NA	NA
PB.5516.7	chr18	-	2863	11	novel_in_catalog	CDH19	novel	6341	12	NA	NA	-1	498	no_combination_of_known_junctions	FALSE	canonical	1	226	junction_1	4590.67646866995	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	299	2365	95.0	-7	True	NA	NA
PB.5516.1	chr18	-	3754	12	full-splice_match	CDH19	ENST00000262150.6	6341	12	-36	2623	-32	1106	multi-exon	TRUE	canonical	1	3685	junction_1	3526.0516794682676	NA	1	NA	TRUE	NA	NA	NA	C	coding	772	2319	330	2648	60.0	1	True	TATAAA	-34
PB.5516.2	chr18	-	3295	12	full-splice_match	CDH19	ENST00000262150.6	6341	12	-6	3052	-2	677	multi-exon	FALSE	canonical	1	3685	junction_1	3526.0516794682676	NA	1	NA	TRUE	NA	NA	NA	C	coding	772	2319	300	2618	35.0	-8	True	AATAAA	-31
PB.5516.3	chr18	-	3460	13	novel_in_catalog	CDH19	novel	6341	12	NA	NA	-44	655	combination_of_known_junctions	FALSE	canonical	1	534	junction_12	5693.680928962681	NA	1	NA	TRUE	NA	NA	NA	C	coding	772	2319	487	2805	35.0	60	False	AATAAA	-9
PB.12036.1	chrX	-	2614	15	full-splice_match	MAOB	ENST00000378069.4	2566	15	-50	2	-50	-2	multi-exon	FALSE	canonical	1	151955	junction_14	54403.47117920821	NA	0	NA	TRUE	NA	NA	NA	A	coding	520	1563	199	1761	10.0	14	False	AATAAA	-13
PB.6364.7	chr2	+	4174	10	full-splice_match	SELENOI	ENST00000260585.11	8101	10	24	3903	-11	-3903	multi-exon	FALSE	canonical	1	111249	junction_8	48848.211499159996	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	96	1256	15.0	-8	True	AATAAA	-14
PB.10287.4	chr6	-	3821	24	novel_in_catalog	SYNE1	novel	27748	146	NA	NA	-17	29772	combination_of_known_junctions	FALSE	canonical	1	38441	junction_23	40475.28888898142	NA	0	NA	TRUE	NA	NA	NA	B	coding	1247	3741	79	3819	70.0	-50	True	ATTAAA	-3
PB.9916.1	chr6	+	2372	7	full-splice_match	SLC39A7	ENST00000374677.7	2409	7	36	1	36	-1	multi-exon	FALSE	canonical	1	1150919	junction_6	300033.23340460507	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	338	1747	10.0	19	True	AATAAA	-23
PB.9916.2	chr6	+	2085	8	full-splice_match	SLC39A7	ENST00000374675.7	2153	8	65	3	18	-3	multi-exon	FALSE	canonical	1	538498	junction_1	437349.02549220296	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	53	1462	15.0	1	True	AATAAA	-21
PB.8803.5	chr4	-	2668	16	novel_not_in_catalog	CENPC	novel	6940	19	NA	NA	-1	480	any annotated donor/acceptor	FALSE	canonical	1	681	junction_7	33589.60898624586	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	150	1766	65.0	-2	True	AAGAAA	-8
PB.11142.2	chr8	+	4302	4	full-splice_match	FAM110B	ENST00000519262.5	578	4	-7	-3717	-7	928	multi-exon	FALSE	canonical	1	28936	junction_1	17652.131448260483	NA	3	NA	TRUE	NA	NA	NA	C	coding	370	1113	817	1929	90.0	-21	True	NA	NA
PB.3878.5	chr15	-	7558	41	novel_in_catalog	MYO5A	novel	12225	41	NA	NA	0	1458	combination_of_known_junctions	FALSE	canonical	1	49034	junction_13	76363.05520308478	NA	1	NA	TRUE	NA	NA	NA	B	coding	1877	5634	75	5708	20.0	-1	True	ATTAAA	-24
PB.8803.7	chr4	-	1398	8	incomplete-splice_match	CENPC	ENST00000510189.5	2917	14	0	20863	0	-2218	3prime_fragment	FALSE	canonical	1	12417	junction_6	35872.154273253254	NA	5	NA	TRUE	NA	NA	NA	C	coding	416	1248	149	1396	75.0	-1	True	NA	NA
PB.3153.11	chr13	+	2612	19	novel_not_in_catalog	LRCH1	novel	4710	19	NA	NA	22331	1300	any annotated donor/acceptor	FALSE	canonical	1	3063	junction_1	63009.60767030241	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	142	1875	20.0	-6803	False	AATAAA	-16
PB.3153.10	chr13	+	2871	19	novel_not_in_catalog	LRCH1	novel	4710	19	NA	NA	22329	-1480	any annotated donor/acceptor	FALSE	canonical	1	3063	junction_1	51432.231174192275	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	144	1961	30.0	-6805	False	ATTAAA	-18
PB.6611.1	chr2	-	2131	4	novel_not_in_catalog	KRCC1	novel	1753	4	NA	NA	-56	-1	any annotated donor/acceptor	FALSE	canonical	1	2312	junction_3	134678.4857288729	NA	1	1	TRUE	NA	NA	NA	C	coding	259	780	774	1553	15.0	-14	True	AATAAA	-15
PB.765.4	chr1	-	1584	14	full-splice_match	ILF2	ENST00000361891.8	1659	14	78	-3	12	3	multi-exon	FALSE	canonical	1	1632815	junction_11	1054185.8382748698	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	49	1221	0.0	16	True	ATTAAA	-19
PB.6364.3	chr2	+	7983	9	novel_in_catalog	SELENOI	novel	504	5	NA	NA	1	-8	intron_retention	FALSE	canonical	1	12662	junction_5	81356.95424793138	NA	2	NA	TRUE	NA	NA	NA	C	coding	196	591	119	709	20.0	-31	True	AATAAA	-29
PB.11746.2	chr9	+	738	3	full-splice_match	ATP6V1G1	ENST00000374050.3	1080	3	24	318	-7	-318	multi-exon	FALSE	canonical	1	2660001	junction_1	379484.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	70	426	80.0	-54	True	NA	NA
PB.8803.2	chr4	-	2982	19	full-splice_match	CENPC	ENST00000273853.10	6940	19	228	3730	105	-1	multi-exon	FALSE	canonical	1	12417	junction_17	25948.650227093214	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	24	2855	40.0	184	False	AATAAA	-21
PB.2724.1	chr12	+	3496	16	incomplete-splice_match	SRGAP1	ENST00000355086.7	23331	22	218693	18441	20192	0	5prime_fragment	FALSE	canonical	1	24432	junction_6	15039.583791522366	NA	20	NA	TRUE	NA	NA	NA	B	coding	767	2304	85	2388	75.0	NA	False	NA	NA
PB.8803.3	chr4	-	3139	19	novel_not_in_catalog	CENPC	novel	6940	19	NA	NA	47	-1	any annotated donor/acceptor	FALSE	canonical	1	12417	junction_17	27600.213912494084	NA	1	NA	TRUE	NA	NA	NA	C	coding	935	2808	205	3012	40.0	3	True	AATAAA	-21
PB.10610.1	chr7	-	2182	9	novel_not_in_catalog	STAG3L2	novel	2130	8	NA	NA	0	3976	intron_retention	FALSE	non_canonical	0	0	junction_1	21406.181010107804	NA	29	4	TRUE	NA	NA	NA	C	coding	114	345	609	953	95.0	NA	False	NA	NA
PB.10610.2	chr7	-	1709	6	full-splice_match	STAG3L2	ENST00000622215.1	1026	6	-67	-616	-23	234	multi-exon	FALSE	canonical	1	1599	junction_2	24057.107809543522	NA	3	NA	TRUE	NA	NA	NA	C	coding	108	327	418	744	95.0	NA	False	NA	NA
PB.11977.4	chrX	-	3010	10	full-splice_match	FANCB	ENST00000398334.5	3008	10	-2	0	-2	0	multi-exon	FALSE	canonical	1	23350	junction_7	10269.432240548153	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2562	289	2850	25.0	-6	True	AATAAA	-15
PB.7433.4	chr20	+	3414	7	novel_in_catalog	PCMTD2	novel	1049	6	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	1991	junction_1	181419.79050694368	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	279	1364	25.0	-15	True	AATAAA	-12
PB.11977.6	chrX	-	2698	3	novel_not_in_catalog	FANCB	novel	3040	11	NA	NA	0	2283	any annotated donor/acceptor	FALSE	canonical	1	8287	junction_2	25116.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	266	1216	50.0	-4	True	AATACA	-14
PB.7433.5	chr20	+	3586	6	full-splice_match	PCMTD2	ENST00000369758.8	3212	6	-7	-367	-7	-210	multi-exon	FALSE	canonical	1	25677	junction_4	167763.21922113918	NA	2	1	TRUE	NA	NA	NA	C	coding	334	1005	162	1166	15.0	-14	True	AATAAA	-18
PB.11977.1	chrX	-	3059	11	novel_in_catalog	FANCB	novel	3040	11	NA	NA	-2	7	combination_of_known_junctions	TRUE	canonical	1	962	junction_1	14615.662569996612	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	289	2865	20.0	-6	True	NA	NA
PB.7433.6	chr20	+	4856	6	novel_in_catalog	PCMTD2	novel	1049	6	NA	NA	-3	-190	combination_of_known_junctions	FALSE	canonical	1	45668	junction_1	142637.03154314452	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	1331	2416	25.0	-2	True	AATAAA	-38
PB.318.10	chr1	+	2010	13	full-splice_match	CAP1	ENST00000372805.7	2217	13	-4	211	4	-211	multi-exon	FALSE	canonical	1	385351	junction_6	486021.1421432071	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	56	1483	40.0	15	True	NA	NA
PB.318.11	chr1	+	2597	13	full-splice_match	CAP1	ENST00000372805.7	2217	13	-3	-377	-3	-1	multi-exon	FALSE	canonical	1	385351	junction_6	486021.1421432071	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	55	1482	15.0	16	True	AATAAA	-17
PB.318.12	chr1	+	2665	14	novel_in_catalog	CAP1	novel	3105	13	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	48081	junction_1	647613.719865102	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	123	1550	15.0	16	True	AATAAA	-17
PB.7433.7	chr20	+	3861	6	full-splice_match	PCMTD2	ENST00000308824.10	3843	6	-21	3	-2	-3	multi-exon	FALSE	canonical	1	89660	junction_1	126483.499160009	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	149	1234	30.0	-1	True	AATAAA	-19
PB.318.14	chr1	+	1635	9	novel_not_in_catalog	CAP1	novel	3105	13	NA	NA	-2	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	755128.9936836537	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	326	922	90.0	17	True	NA	NA
PB.9546.1	chr5	+	5418	13	full-splice_match	STK32A	ENST00000397936.7	5393	13	-31	6	-31	6	multi-exon	FALSE	canonical	1	10832	junction_8	3372.1783379672484	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	365	1555	40.0	-193	False	ATTAAA	-12
PB.318.16	chr1	+	2072	14	novel_in_catalog	CAP1	novel	3105	13	NA	NA	-2	-211	combination_of_known_junctions	FALSE	canonical	1	48081	junction_1	647613.719865102	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	118	1545	40.0	21	True	NA	NA
PB.298.10	chr1	-	2060	5	novel_in_catalog	C1orf109	novel	2355	5	NA	NA	-13	522	combination_of_known_junctions	FALSE	canonical	1	17732	junction_4	91946.56426968872	NA	1	1	TRUE	NA	NA	NA	B	coding	218	657	536	1192	55.0	-17	True	AGTAAA	-18
PB.318.18	chr1	+	2506	13	novel_not_in_catalog	CAP1	novel	3105	13	NA	NA	12	-25	any annotated donor/acceptor	FALSE	canonical	1	6856	junction_1	602686.4596584521	NA	6	1	TRUE	NA	NA	NA	C	coding	475	1428	366	1793	90.0	-2	True	NA	NA
PB.1504.10	chr10	+	2160	9	novel_not_in_catalog	GHITM	novel	2128	9	NA	NA	138	-71	any annotated donor/acceptor	FALSE	canonical	1	10987	junction_1	1057806.5741602925	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	297	1334	20.0	50	False	AATACA	-16
PB.6778.1	chr2	-	2285	5	novel_not_in_catalog	RBM43	novel	4192	4	NA	NA	49	-636	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	22404.712824537608	NA	1	NA	TRUE	NA	NA	NA	A	coding	357	1074	104	1177	85.0	-29	True	NA	NA
PB.12000.4	chrX	+	1508	9	full-splice_match	SMS	ENST00000379404.5	1174	9	20	-354	20	-8	multi-exon	FALSE	canonical	1	19216	junction_2	123684.22947040378	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	91	1032	35.0	2	True	ATTAAA	-6
PB.12000.3	chrX	+	2434	10	novel_in_catalog	SMS	novel	1837	11	NA	NA	15	-8	intron_retention	FALSE	canonical	1	78548	junction_1	90845.46248084174	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	96	773	35.0	-3	True	ATTAAA	-6
PB.12000.2	chrX	+	3288	10	incomplete-splice_match	SMS	ENST00000404933.6	1837	11	140	8	-2	-8	intron_retention	FALSE	canonical	1	78548	junction_1	95292.37936652299	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	113	1222	35.0	-20	True	ATTAAA	-6
PB.12000.1	chrX	+	1667	11	full-splice_match	SMS	ENST00000404933.6	1837	11	162	8	20	-8	multi-exon	FALSE	canonical	1	78548	junction_1	100375.25078324835	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	91	1191	35.0	2	True	ATTAAA	-6
PB.7433.1	chr20	+	3240	6	full-splice_match	PCMTD2	ENST00000369758.8	3212	6	-31	3	15	-3	multi-exon	FALSE	canonical	1	25677	junction_4	167763.21922113918	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	186	1190	25.0	-3698	False	AATAAA	-12
PB.6594.15	chr2	+	3603	7	incomplete-splice_match	MAT2A	ENST00000306434.7	2819	9	3	1	0	-1	intron_retention	FALSE	canonical	1	1071348	junction_3	522201.9220481724	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	121	1101	15.0	0	True	AATAAA	-19
PB.8495.2	chr3	+	2127	8	novel_in_catalog	IQCJ-SCHIP1	novel	429	4	NA	NA	47	-3	combination_of_known_junctions	FALSE	canonical	1	12273	junction_2	209765.80155273457	NA	4	NA	TRUE	NA	NA	NA	B	coding	447	1344	195	1538	20.0	-499	False	AATAAA	-23
PB.7433.2	chr20	+	3516	6	full-splice_match	PCMTD2	ENST00000308824.10	3843	6	-29	356	-2	221	multi-exon	FALSE	canonical	1	89660	junction_1	126483.499160009	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	157	1242	30.0	-9	True	AGTAAA	-40
PB.4816.1	chr17	-	3233	4	novel_in_catalog	ZNF286B	novel	5145	4	NA	NA	-34	2469	combination_of_known_junctions	FALSE	canonical	1	11784	junction_1	4391.547866830859	NA	3	NA	TRUE	NA	NA	NA	A	coding	287	864	1790	2653	20.0	NA	False	CATAAA	-19
PB.2514.1	chr12	-	11008	57	full-splice_match	ITPR2	ENST00000381340.7	11405	57	-83	480	-83	-480	multi-exon	TRUE	canonical	1	103063	junction_12	46865.83253368338	NA	4	1	TRUE	NA	NA	NA	C	coding	2701	8106	501	8606	85.0	-12	False	TATAAA	-3
PB.9337.27	chr5	-	3398	9	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	5676	junction_6	179953.79646592622	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	369	1622	30.0	0	True	AATAAA	-32
PB.8924.24	chr4	-	2773	12	novel_not_in_catalog	LEF1	novel	3068	12	NA	NA	-20	13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	91124.66817126037	NA	4	NA	TRUE	NA	NA	NA	C	coding	371	1116	460	1575	40.0	4850	False	AATAAA	-8
PB.12248.8	chrX	-	4428	20	novel_in_catalog	CUL4B	novel	4902	20	NA	NA	11	-10	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_17	167526.08225436375	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	133	2286	55.0	-35	True	AATAAA	-11
PB.8099.13	chr3	+	1534	4	incomplete-splice_match	ARIH2	ENST00000449376.5	2278	17	16	54958	-1	706	3prime_fragment	FALSE	canonical	1	51635	junction_3	74472.40118922506	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	2	349	55.0	-13	True	AATAAA	-15
PB.8099.12	chr3	+	4164	3	full-splice_match	ARIH2	ENST00000492077.5	731	3	16	-3449	0	710	multi-exon	FALSE	canonical	1	128115	junction_2	52592.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	29	90	342	431	40.0	-17	True	AATAAA	-19
PB.8099.15	chr3	+	2696	4	novel_not_in_catalog	ARIH2	novel	598	3	NA	NA	0	7746	any annotated donor/acceptor	FALSE	canonical	1	46999	junction_3	77475.3811263079	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	305	784	40.0	-9	True	NA	NA
PB.12054.6	chrX	-	2236	5	novel_not_in_catalog	ELK1	novel	2695	6	NA	NA	24	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	155974.11513613406	NA	3	1	TRUE	NA	NA	NA	C	coding	249	750	180	929	15.0	-7	True	AATATA	-15
PB.8099.17	chr3	+	4858	16	novel_in_catalog	ARIH2	novel	598	3	NA	NA	0	-14	intron_retention	FALSE	canonical	1	128115	junction_2	181166.06600128574	NA	2	NA	TRUE	NA	NA	NA	C	coding	493	1482	3041	4522	85.0	-1	True	NA	NA
PB.8099.16	chr3	+	1770	15	novel_in_catalog	ARIH2	novel	598	3	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	1	5822	junction_2	194773.1269525718	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	379	1434	85.0	-9	True	NA	NA
PB.8099.18	chr3	+	2302	16	novel_in_catalog	ARIH2	novel	598	3	NA	NA	2	-14	combination_of_known_junctions	FALSE	canonical	1	28	junction_2	203492.9146671533	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	485	1966	85.0	1	True	NA	NA
PB.12248.7	chrX	-	4922	21	novel_not_in_catalog	CUL4B	novel	4902	20	NA	NA	-52	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	166615.87047400378	NA	12	1	TRUE	NA	NA	NA	C	coding	780	2343	438	2780	55.0	-40	True	AATAAA	-11
PB.12248.6	chrX	-	4875	21	full-splice_match	CUL4B	ENST00000336592.10	3109	21	11	-1777	11	-10	multi-exon	FALSE	non_canonical	0	0	junction_17	157405.57900909198	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	31	2733	55.0	23	True	AATAAA	-11
PB.10666.1	chr7	+	1934	1	genic	CYP51A1-AS1	novel	NA	NA	NA	NA	-45	-44233	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-35	False	NA	NA
PB.4633.2	chr16	-	1860	1	full-splice_match	CENPBD1	ENST00000646748.1	2744	1	0	884	0	-627	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	187	564	613	1176	95.0	-48	False	NA	NA
PB.4633.1	chr16	-	2657	1	full-splice_match	CENPBD1	ENST00000646748.1	2744	1	12	75	12	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	132	399	2016	2414	20.0	-36	True	NA	NA
PB.6093.4	chr19	+	1949	1	novel_in_catalog	PPP5C	novel	2109	13	NA	NA	3763	-23884	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	418	735	95.0	21	False	NA	NA
PB.6093.1	chr19	+	2031	12	full-splice_match	PPP5C	ENST00000391919.1	1929	12	-103	1	11	-1	multi-exon	FALSE	canonical	1	35297	junction_4	302935.0956001102	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	99	1526	10.0	-18	True	AATAAA	-17
PB.6093.3	chr19	+	1981	13	novel_not_in_catalog	PPP5C	novel	2109	13	NA	NA	3746	-1	any annotated donor/acceptor	FALSE	canonical	1	1875	junction_1	301907.7342908573	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	295	1476	10.0	4	True	AATAAA	-17
PB.6093.2	chr19	+	2019	13	full-splice_match	PPP5C	ENST00000012443.8	2109	13	89	1	-18	-1	multi-exon	TRUE	canonical	1	749655	junction_5	152610.61966970787	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	21	1514	10.0	-4	True	AATAAA	-17
PB.769.2	chr1	-	2964	1	novel_in_catalog	GATAD2B	novel	1027	4	NA	NA	2448	-1902	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	9329	False	TTTAAA	-21
PB.8558.3	chr3	+	5088	15	full-splice_match	DVL3	ENST00000313143.8	5241	15	152	1	-5	-1	multi-exon	FALSE	canonical	1	379266	junction_1	141859.21309516556	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	83	2233	30.0	61	True	NA	NA
PB.11854.4	chr9	+	2017	11	novel_not_in_catalog	EXOSC2	novel	739	6	NA	NA	-3	2713	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	223073.94112735355	NA	1	1	TRUE	NA	NA	NA	C	coding	293	882	21	902	30.0	-8	True	AATAAA	-18
PB.10034.1	chr6	-	3277	4	novel_in_catalog	GSTA4	novel	1698	5	NA	NA	-22	32	intron_retention	FALSE	canonical	1	228963	junction_3	45126.30723498951	NA	2	NA	TRUE	NA	NA	NA	A	coding	107	324	97	420	15.0	-43	True	AATAAA	-24
PB.769.1	chr1	-	5563	11	full-splice_match	GATAD2B	ENST00000368655.4	7478	11	13	1902	6	-1902	multi-exon	FALSE	canonical	1	90664	junction_10	51296.904729232934	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	232	2013	80.0	9	True	TTTAAA	-21
PB.6351.18	chr2	-	2380	19	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-29	14426	intron_retention	FALSE	canonical	1	22450	junction_17	95813.95224420252	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2001	378	2378	65.0	-19	True	AAGAAA	-23
PB.3036.5	chr13	+	2676	8	novel_not_in_catalog	MPHOSPH8	novel	4235	14	NA	NA	-18	-140	any annotated donor/acceptor	FALSE	canonical	1	11262	junction_7	164861.14379200505	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	87	1880	75.0	-1	True	AATACA	-2
PB.3036.4	chr13	+	3295	14	full-splice_match	MPHOSPH8	ENST00000361479.9	4235	14	-21	961	-21	426	multi-exon	FALSE	canonical	1	63021	junction_2	99695.59675444473	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	90	2672	95.0	-4	True	NA	NA
PB.3036.7	chr13	+	2782	14	full-splice_match	MPHOSPH8	ENST00000361479.9	4235	14	-12	1465	-12	52	multi-exon	FALSE	canonical	1	63021	junction_2	99695.59675444473	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	81	2663	15.0	5	True	NA	NA
PB.4917.1	chr17	-	973	3	full-splice_match	CCL3L1	ENST00000616702.1	548	3	-301	-124	0	-3	multi-exon	FALSE	canonical	1	41	junction_2	255.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-19
PB.3036.1	chr13	+	1345	4	incomplete-splice_match	MPHOSPH8	ENST00000361479.9	4235	14	-32	25011	-32	-1964	3prime_fragment	FALSE	canonical	1	63021	junction_2	130492.2516890903	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1245	101	1345	70.0	-15	True	AAGAAA	-18
PB.3036.3	chr13	+	2810	13	novel_in_catalog	MPHOSPH8	novel	4235	14	NA	NA	-25	-843	combination_of_known_junctions	TRUE	canonical	1	63021	junction_2	120790.73803402956	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	94	2697	70.0	-8	True	NA	NA
PB.2357.1	chr11	-	5861	20	novel_in_catalog	CDON	novel	9138	20	NA	NA	-39	1470	combination_of_known_junctions	TRUE	canonical	1	22901	junction_19	14439.756913378129	NA	0	NA	TRUE	NA	NA	NA	A	coding	1264	3795	334	4128	30.0	15	True	TATAAA	-17
PB.5718.4	chr19	+	4568	18	full-splice_match	LDLR	ENST00000558518.5	3617	18	96	-1047	-4	-311	multi-exon	FALSE	canonical	1	405226	junction_1	108088.50705195128	NA	3	NA	TRUE	NA	NA	NA	C	coding	860	2583	92	2674	65.0	-5	True	NA	NA
PB.5718.5	chr19	+	4403	18	full-splice_match	LDLR	ENST00000558518.5	3617	18	78	-864	-22	-494	multi-exon	FALSE	canonical	1	405226	junction_1	108088.50705195128	NA	2	NA	TRUE	NA	NA	NA	C	coding	860	2583	110	2692	75.0	-7029	False	NA	NA
PB.5718.6	chr19	+	3918	18	full-splice_match	LDLR	ENST00000558518.5	3617	18	88	-389	-12	389	multi-exon	FALSE	canonical	1	405226	junction_1	108088.50705195128	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	100	2682	65.0	-13	True	NA	NA
PB.5718.7	chr19	+	3945	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	-9	559	combination_of_known_junctions	FALSE	canonical	1	18891	junction_11	176027.42261026404	NA	2	NA	TRUE	NA	NA	NA	C	coding	596	1791	97	1887	95.0	-10	True	NA	NA
PB.5718.1	chr19	+	4065	18	full-splice_match	LDLR	ENST00000558518.5	3617	18	111	-559	-5	559	multi-exon	FALSE	canonical	1	405226	junction_1	108088.50705195128	NA	26	NA	TRUE	NA	NA	NA	C	coding	860	2583	77	2659	95.0	10	True	NA	NA
PB.5718.2	chr19	+	5084	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	-44	10	combination_of_known_junctions	FALSE	canonical	1	18891	junction_11	176027.42261026404	NA	3	NA	TRUE	NA	NA	NA	C	coding	596	1791	132	1922	25.0	2	True	ATTAAA	-24
PB.1836.2	chr11	+	1748	5	full-splice_match	C11orf58	ENST00000228136.8	2049	5	223	78	-20	-78	multi-exon	FALSE	canonical	1	926149	junction_1	483041.7676063324	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	156	707	35.0	-34	True	AGTAAA	-14
PB.9751.1	chr6	+	1865	8	full-splice_match	NOL7	ENST00000451315.6	1184	8	1	-682	1	682	multi-exon	FALSE	canonical	1	1078515	junction_3	239469.4968818725	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	83	805	35.0	-11	True	ATTAAA	-25
PB.9751.3	chr6	+	1585	8	full-splice_match	NOL7	ENST00000451315.6	1184	8	12	-413	12	413	multi-exon	FALSE	canonical	1	1078515	junction_3	239469.4968818725	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	72	794	25.0	0	True	ATTAAA	-17
PB.9751.2	chr6	+	874	8	full-splice_match	NOL7	ENST00000451315.6	1184	8	3	307	3	-307	multi-exon	FALSE	canonical	1	1078515	junction_3	239469.4968818725	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	81	803	55.0	-9	True	AATAAA	-18
PB.5718.8	chr19	+	5094	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	19211	junction_15	174808.55266868693	NA	9	NA	TRUE	NA	NA	NA	C	coding	834	2505	88	2592	30.0	-1	True	ATTAAA	-16
PB.1836.1	chr11	+	2170	6	novel_not_in_catalog	C11orf58	novel	813	4	NA	NA	-24	252	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	667558.4944475202	NA	3	NA	TRUE	NA	NA	NA	C	coding	183	552	160	711	45.0	-38	True	AGTAAA	-41
PB.2124.10	chr11	+	4407	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-7	9	combination_of_known_junctions	FALSE	canonical	1	97819	junction_1	167034.64312287784	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	389	2923	15.0	-28	True	AATAAA	-23
PB.2124.11	chr11	+	3270	7	incomplete-splice_match	PPP6R3	ENST00000524845.5	2771	23	-25	56582	-7	2315	3prime_fragment	FALSE	canonical	1	173470	junction_1	116078.12158628344	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	262	1002	90.0	-28	True	NA	NA
PB.2124.12	chr11	+	5583	15	novel_not_in_catalog	PPP6R3	novel	560	5	NA	NA	-4	11173	any annotated donor/acceptor	FALSE	canonical	1	14390	junction_14	161882.53722181538	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	259	2064	25.0	-25	True	AATAAA	-15
PB.2124.13	chr11	+	5201	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	13292	junction_3	194140.4046939669	NA	1	NA	TRUE	NA	NA	NA	C	coding	844	2535	453	2987	20.0	-23	True	AATAAA	-21
PB.2124.14	chr11	+	5092	24	full-splice_match	PPP6R3	ENST00000393800.6	5093	24	-2	3	-2	0	multi-exon	FALSE	canonical	1	173470	junction_1	130724.7712184398	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	257	2878	20.0	-23	True	AATAAA	-21
PB.2124.15	chr11	+	5284	25	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	13292	junction_3	183172.2582327258	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	451	3072	25.0	-21	True	AATAAA	-19
PB.2124.16	chr11	+	4455	25	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	27363	junction_2	164456.25594254202	NA	2	2	TRUE	NA	NA	NA	C	coding	873	2622	359	2980	25.0	-20	True	AATAAA	-14
PB.2124.17	chr11	+	3024	6	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-2	2314	combination_of_known_junctions	FALSE	canonical	1	35691	junction_2	194283.10450988784	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	290	757	85.0	-16	True	NA	NA
PB.2124.18	chr11	+	4761	22	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	35691	junction_2	173001.16835948257	NA	3	NA	TRUE	NA	NA	NA	C	coding	753	2262	288	2549	25.0	-14	True	AATAAA	-19
PB.2124.19	chr11	+	5188	25	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	27363	junction_2	164456.25594254202	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	353	2974	20.0	-14	True	AATAAA	-21
PB.8662.9	chr4	+	5336	23	novel_in_catalog	NSD2	novel	4251	22	NA	NA	-30	-2	no_combination_of_known_junctions	FALSE	canonical	1	3150	junction_1	175426.7183472481	NA	1	NA	TRUE	NA	NA	NA	C	coding	1365	4098	354	4451	25.0	1	True	AATATA	-26
PB.8662.8	chr4	+	7324	22	full-splice_match	NSD2	ENST00000508803.5	4251	22	-30	-3043	-30	-246	multi-exon	FALSE	canonical	1	155384	junction_1	139155.45407055653	NA	0	NA	TRUE	NA	NA	NA	C	coding	1365	4098	179	4276	20.0	1	True	ATTAAA	-17
PB.178.8	chr1	+	2920	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	28	1398	3	-1341	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	170	931	35.0	0	True	TATAAA	-3
PB.4344.5	chr16	-	2329	6	novel_not_in_catalog	SMG1P6	novel	2930	19	NA	NA	-7301	-15483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1507.658847352411	NA	2	NA	TRUE	NA	NA	NA	B	coding	193	582	251	832	35.0	NA	False	AATAAA	-17
PB.4907.1	chr17	-	1944	1	novel_in_catalog	AC022916.1	novel	2658	2	NA	NA	7	-8746	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	2343	False	NA	NA
PB.4623.1	chr16	-	2347	3	full-splice_match	SPATA2L	ENST00000289805.9	2335	3	-25	13	-15	1	multi-exon	FALSE	canonical	1	38475	junction_2	26571.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	95	1369	35.0	-16	False	ATTAAA	-16
PB.4623.2	chr16	-	2467	3	full-splice_match	SPATA2L	ENST00000569918.1	692	3	-65	-1710	0	-1	multi-exon	FALSE	canonical	1	22137	junction_2	34740.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	217	1491	35.0	-1	True	ATTAAA	-14
PB.4907.2	chr17	-	1607	1	novel_in_catalog	AC022916.1	novel	2658	2	NA	NA	35	-9055	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-4	True	NA	NA
PB.11995.8	chrX	-	2978	17	full-splice_match	SH3KBP1	ENST00000379698.8	2678	17	-46	-254	-46	254	multi-exon	FALSE	canonical	1	30602	junction_16	201910.75324082506	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	114	2000	80.0	-25	True	ATTAAA	-3
PB.11995.5	chrX	-	3227	18	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	14	254	any annotated donor/acceptor	FALSE	canonical	1	20888	junction_16	221843.09654163997	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	375	2249	80.0	12	True	ATTAAA	-3
PB.11995.4	chrX	-	3257	19	novel_in_catalog	SH3KBP1	novel	4731	18	NA	NA	67	254	no_combination_of_known_junctions	FALSE	canonical	1	3870	junction_13	267178.53360285674	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	225	2279	80.0	366	False	ATTAAA	-3
PB.11995.7	chrX	-	3056	18	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	30646	254	any annotated donor/acceptor	FALSE	canonical	1	22	junction_17	215878.959927287	NA	2	1	TRUE	NA	NA	NA	C	coding	606	1821	258	2078	80.0	-4180	False	ATTAAA	-3
PB.11995.6	chrX	-	3093	17	novel_in_catalog	SH3KBP1	novel	4731	18	NA	NA	45	254	no_combination_of_known_junctions	FALSE	canonical	1	41676	junction_3	236320.51951645533	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	247	2115	80.0	-3	True	ATTAAA	-3
PB.11995.1	chrX	-	3276	18	full-splice_match	SH3KBP1	ENST00000397821.7	4731	18	10	1445	10	273	multi-exon	FALSE	canonical	1	231353	junction_17	179425.67553461212	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	282	2279	55.0	8	True	AATAAA	-11
PB.11995.3	chrX	-	2995	17	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	-373	254	any annotated donor/acceptor	FALSE	canonical	1	9168	junction_16	206106.49153842134	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	197	2017	80.0	-1	True	ATTAAA	-3
PB.11995.2	chrX	-	2343	13	full-splice_match	SH3KBP1	ENST00000379716.5	3819	13	63	1413	63	273	multi-exon	FALSE	canonical	1	93609	junction_12	204731.74098758	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	63	1346	55.0	3299	False	AATAAA	-11
PB.6070.2	chr19	+	2174	12	novel_not_in_catalog	RELB	novel	2294	12	NA	NA	-8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	118065.26989027916	NA	2	1	TRUE	NA	NA	NA	B	coding	433	1302	547	1848	0.0	-28	True	AATAAA	-17
PB.7609.3	chr22	-	2516	3	full-splice_match	C22orf39	ENST00000399562.8	3350	3	518	316	-17	-316	multi-exon	FALSE	canonical	1	119491	junction_1	23315.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	27	344	5.0	-15	True	TTTAAA	-4
PB.4600.1	chr16	+	3176	18	full-splice_match	ZC3H18	ENST00000301011.9	3729	18	-15	568	-15	0	multi-exon	FALSE	canonical	1	247206	junction_1	71307.12921034932	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	216	3077	85.0	-107	False	NA	NA
PB.4600.3	chr16	+	3713	18	full-splice_match	ZC3H18	ENST00000301011.9	3729	18	13	3	-9	-3	multi-exon	FALSE	canonical	1	247206	junction_1	71307.12921034932	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	188	3049	5.0	-15	True	AATAAA	-15
PB.4600.2	chr16	+	2446	14	incomplete-splice_match	ZC3H18	ENST00000301011.9	3729	18	12	4195	-10	1072	3prime_fragment	FALSE	canonical	1	247206	junction_1	51799.869267957765	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2256	189	2444	40.0	-16	True	NA	NA
PB.4600.4	chr16	+	3787	19	full-splice_match	ZC3H18	ENST00000452588.6	3211	19	-9	-567	-9	-1	multi-exon	FALSE	canonical	1	78143	junction_4	103737.13662201185	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	188	3121	0.0	-15	True	AATAAA	-17
PB.4600.7	chr16	+	2645	13	novel_not_in_catalog	ZC3H18	novel	3729	18	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	145189.53374896917	NA	2	1	TRUE	NA	NA	NA	C	coding	404	1215	176	1390	5.0	-3	True	AATAAA	-15
PB.4600.6	chr16	+	3517	18	novel_not_in_catalog	ZC3H18	novel	3729	18	NA	NA	1	-66	intron_retention	FALSE	canonical	1	18	junction_17	102506.71551480527	NA	1	1	TRUE	NA	NA	NA	C	coding	930	2793	178	2970	45.0	-5	True	AATATA	-13
PB.4600.9	chr16	+	2823	18	novel_not_in_catalog	ZC3H18	novel	3729	18	NA	NA	6826	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	126508.54225077144	NA	1	NA	TRUE	NA	NA	NA	C	coding	740	2223	502	2724	85.0	6831	False	NA	NA
PB.8346.32	chr3	-	2025	9	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-21	-5265	any annotated donor/acceptor	FALSE	canonical	1	28533	junction_6	159452.0187524585	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	120	2024	65.0	0	True	NA	NA
PB.9217.2	chr5	-	3301	4	novel_in_catalog	MRPS30-DT	novel	738	3	NA	NA	-5	2484	no_combination_of_known_junctions	FALSE	canonical	1	569	junction_3	10781.062790323082	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	139	510	15.0	-54	True	NA	NA
PB.9217.3	chr5	-	3922	1	genic	MRPS30-DT	novel	NA	NA	NA	NA	-12	-27664	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-61	True	NA	NA
PB.9217.1	chr5	-	3235	3	full-splice_match	MRPS30-DT	ENST00000505302.1	468	3	-28	-2739	8	2501	multi-exon	FALSE	canonical	1	13414	junction_2	5546.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-41	True	NA	NA
PB.12038.6	chrX	+	2384	7	novel_not_in_catalog	KRBOX4	novel	2774	6	NA	NA	-22	-11	any annotated donor/acceptor	FALSE	canonical	1	701	junction_4	69778.13047657236	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	376	768	40.0	1	True	AATAAA	-5
PB.12038.7	chrX	+	1952	7	novel_in_catalog	KRBOX4	novel	2774	6	NA	NA	-22	-453	no_combination_of_known_junctions	FALSE	canonical	1	24336	junction_5	56629.9063022848	NA	1	NA	TRUE	NA	NA	NA	C	coding	98	297	219	515	70.0	1	True	NA	NA
PB.12038.4	chrX	+	2364	6	full-splice_match	KRBOX4	ENST00000344302.8	2774	6	409	1	-26	-1	multi-exon	FALSE	canonical	1	33330	junction_5	49716.312998451525	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	223	738	25.0	-3	True	AATAAA	-15
PB.12038.5	chrX	+	1894	6	full-splice_match	KRBOX4	ENST00000298190.10	1354	6	-23	-517	-23	-453	multi-exon	FALSE	canonical	1	44495	junction_5	45920.93497480207	NA	2	1	TRUE	NA	NA	NA	C	coding	166	501	220	720	70.0	0	True	NA	NA
PB.12038.2	chrX	+	1790	6	full-splice_match	KRBOX4	ENST00000344302.8	2774	6	433	551	-2	419	multi-exon	FALSE	canonical	1	33330	junction_5	49716.312998451525	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	199	714	40.0	-7	True	NA	NA
PB.12038.3	chrX	+	2350	6	full-splice_match	KRBOX4	ENST00000298190.10	1354	6	-28	-968	-28	-2	multi-exon	FALSE	canonical	1	44495	junction_5	45920.93497480207	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	225	725	25.0	-5	True	AATAAA	-14
PB.7609.2	chr22	-	2829	3	full-splice_match	C22orf39	ENST00000399562.8	3350	3	519	2	-16	-2	multi-exon	FALSE	canonical	1	119491	junction_1	23315.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	26	343	25.0	-14	True	NA	NA
PB.12038.1	chrX	+	1973	7	novel_in_catalog	KRBOX4	novel	2774	6	NA	NA	-58	-453	no_combination_of_known_junctions	FALSE	canonical	1	22697	junction_5	57016.21656647831	NA	2	NA	TRUE	NA	NA	NA	C	coding	93	282	255	536	70.0	-84	False	NA	NA
PB.8346.31	chr3	-	2169	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-21	-4530	any annotated donor/acceptor	FALSE	canonical	1	28533	junction_7	158532.45931525572	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2049	120	2168	65.0	0	True	NA	NA
PB.12038.8	chrX	+	2121	4	novel_not_in_catalog	KRBOX4	novel	2774	6	NA	NA	-1	5216	any annotated donor/acceptor	FALSE	canonical	1	2355	junction_3	59468.0556115821	NA	8	NA	TRUE	NA	NA	NA	C	coding	39	120	193	312	25.0	-1	True	AATAAA	-15
PB.9374.1	chr5	+	2666	1	genic	LINC02163	novel	NA	NA	NA	NA	-4	-22831	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-23
PB.9381.18	chr5	-	3921	10	full-splice_match	PJA2	ENST00000361189.6	4889	10	75	893	75	-889	multi-exon	FALSE	canonical	1	437772	junction_9	178227.70248411282	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	166	2292	25.0	-3	True	ATTAAA	-25
PB.5300.9	chr17	-	2199	8	full-splice_match	TBC1D16	ENST00000340848.11	4244	8	-69	2114	-48	-2114	multi-exon	FALSE	canonical	1	16575	junction_7	86775.18264845927	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	172	1362	15.0	-1	True	AATACA	-19
PB.3571.12	chr14	-	3825	5	full-splice_match	TMED10	ENST00000303575.8	4127	5	4	298	4	-298	multi-exon	FALSE	canonical	1	829033	junction_3	295970.3156779409	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	49	708	45.0	-25	True	TTTAAA	-32
PB.5300.7	chr17	-	3143	13	novel_not_in_catalog	TBC1D16	novel	10936	12	NA	NA	-24	-2109	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78855.03672153204	NA	15	NA	TRUE	NA	NA	NA	C	coding	767	2304	141	2444	5.0	-1	True	AATACA	-24
PB.5300.6	chr17	-	4221	8	full-splice_match	TBC1D16	ENST00000340848.11	4244	8	-18	41	3	-41	multi-exon	FALSE	canonical	1	16575	junction_7	86775.18264845927	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	121	1311	15.0	-2	True	TTTAAA	-25
PB.5300.5	chr17	-	4208	8	novel_in_catalog	TBC1D16	novel	10936	12	NA	NA	-25	-40	combination_of_known_junctions	FALSE	canonical	1	16575	junction_7	108586.88836642314	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	149	1297	15.0	-1	True	TTTAAA	-26
PB.5300.3	chr17	-	6516	8	novel_in_catalog	TBC1D16	novel	10936	12	NA	NA	13	158	combination_of_known_junctions	FALSE	canonical	1	6415	junction_7	89882.57177550936	NA	2	NA	TRUE	NA	NA	NA	C	coding	396	1191	101	1291	35.0	1258	False	AATAAA	-12
PB.5300.1	chr17	-	6542	8	novel_in_catalog	TBC1D16	novel	10936	12	NA	NA	4	162	combination_of_known_junctions	FALSE	canonical	1	19527	junction_7	85878.84181086463	NA	3	NA	TRUE	NA	NA	NA	C	coding	406	1221	93	1313	20.0	-1	True	AATAAA	-16
PB.3897.2	chr15	+	2436	9	full-splice_match	MINDY2	ENST00000559228.5	9238	9	-14	6816	-14	493	multi-exon	FALSE	canonical	1	81971	junction_8	24426.890261745866	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	97	1962	85.0	-2	True	NA	NA
PB.3897.3	chr15	+	1982	1	novel_in_catalog	MINDY2	novel	4866	8	NA	NA	-11	-58535	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	298	897	94	990	80.0	1	True	NA	NA
PB.3897.1	chr15	+	1915	9	full-splice_match	MINDY2	ENST00000559228.5	9238	9	-17	7340	11	-31	multi-exon	FALSE	canonical	1	81971	junction_8	24426.890261745866	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1815	100	1914	80.0	-5	True	NA	NA
PB.8396.2	chr3	-	4982	20	full-splice_match	PIK3R4	ENST00000356763.7	5015	20	26	7	26	-7	multi-exon	FALSE	canonical	1	128251	junction_19	52990.30167478279	NA	39	2	TRUE	NA	NA	NA	C	coding	1358	4077	533	4609	30.0	19	True	ATTAAA	-20
PB.11862.12	chr9	+	3679	19	novel_not_in_catalog	POMT1	novel	2821	18	NA	NA	-4	0	intron_retention	FALSE	canonical	1	18554	junction_18	87716.03723076606	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	2117	3163	5.0	11	True	ATTAAA	-16
PB.11821.4	chr9	+	3049	3	full-splice_match	URM1	ENST00000372850.5	3045	3	-6	2	-6	-2	multi-exon	FALSE	canonical	1	430958	junction_1	223040.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-20	True	AATAAA	-17
PB.11821.1	chr9	+	3007	4	full-splice_match	URM1	ENST00000452446.2	2944	4	-66	3	-4	-3	multi-exon	FALSE	canonical	1	430958	junction_1	228556.41169790496	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	67	507	35.0	-60	False	AATAAA	-23
PB.11821.3	chr9	+	1337	5	full-splice_match	URM1	ENST00000372853.8	2650	5	30	1283	-12	-1	multi-exon	FALSE	canonical	1	430958	junction_1	233551.38646612654	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	33	338	15.0	-26	True	AATAAA	-18
PB.11821.2	chr9	+	1591	1	novel_in_catalog	URM1	novel	2650	5	NA	NA	2	-15500	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-54	False	NA	NA
PB.11768.3	chr9	+	2599	9	novel_not_in_catalog	MRRF	novel	1841	6	NA	NA	-13	-4	intron_retention	FALSE	canonical	1	9403	junction_6	62599.92329555505	NA	4	1	TRUE	NA	NA	NA	C	coding	158	477	94	570	25.0	-20	True	AATAAA	-19
PB.8239.1	chr3	+	2574	2	novel_not_in_catalog	LINC02050	novel	712	5	NA	NA	5650	84223	any annotated donor/acceptor	FALSE	canonical	1	387	junction_1	0.0	NA	18	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	NA	False	NA	NA
PB.11629.10	chr9	-	1499	10	full-splice_match	GOLM1	ENST00000388712.7	3046	10	0	1547	0	-1546	multi-exon	FALSE	canonical	1	164229	junction_9	319263.51545253507	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	170	1375	30.0	-30	True	AATAAA	-25
PB.2817.5	chr12	-	1982	18	novel_in_catalog	LTA4H	novel	2139	19	NA	NA	51	-1	combination_of_known_junctions	FALSE	canonical	1	191576	junction_2	327598.4702768891	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	72	1670	25.0	-4	True	AATAAA	-19
PB.2817.4	chr12	-	2899	18	novel_in_catalog	LTA4H	novel	2139	19	NA	NA	51	-1	intron_retention	TRUE	canonical	1	15533	junction_2	357184.0666181934	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	72	1628	25.0	-4	True	AATAAA	-19
PB.2817.6	chr12	-	2026	19	full-splice_match	LTA4H	ENST00000228740.6	2139	19	60	53	40	26	multi-exon	FALSE	canonical	1	734863	junction_17	251204.13189083445	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	83	1918	10.0	-15	True	ATTAAA	-25
PB.2817.1	chr12	-	2048	19	full-splice_match	LTA4H	ENST00000228740.6	2139	19	85	6	-48	-1	multi-exon	FALSE	canonical	1	734863	junction_17	251204.13189083445	NA	24	4	TRUE	NA	NA	NA	C	coding	611	1836	58	1893	20.0	10	True	AATAAA	-16
PB.10255.8	chr6	+	1836	11	full-splice_match	LTV1	ENST00000367576.5	1847	11	9	2	9	-2	multi-exon	FALSE	canonical	1	254400	junction_1	161222.11064990435	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	126	1553	30.0	-14	True	ATTAAA	-22
PB.2817.3	chr12	-	6098	18	novel_in_catalog	LTA4H	novel	2139	19	NA	NA	-55	0	intron_retention	FALSE	canonical	1	734863	junction_16	258484.6896680917	NA	4	NA	TRUE	NA	NA	NA	C	coding	460	1383	65	1447	25.0	3	True	AATAAA	-20
PB.2817.2	chr12	-	4798	19	novel_in_catalog	LTA4H	novel	2139	19	NA	NA	43	5	intron_retention	TRUE	canonical	1	8022	junction_5	364057.3375918201	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	80	1522	35.0	-12	True	AATAAA	-27
PB.10255.5	chr6	+	1501	11	full-splice_match	LTV1	ENST00000367576.5	1847	11	-4	350	-4	-350	multi-exon	FALSE	canonical	1	254400	junction_1	161222.11064990435	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1362	139	1500	70.0	-27	True	AAGAAA	-26
PB.10255.4	chr6	+	3283	6	incomplete-splice_match	LTV1	ENST00000367576.5	1847	11	-11	3462	-11	-3462	3prime_fragment	FALSE	canonical	1	254400	junction_1	103624.25277974264	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	146	985	45.0	-34	True	AATAAA	-9
PB.10255.7	chr6	+	2209	7	novel_not_in_catalog	AL049844.1	novel	762	5	NA	NA	36261	15733	any annotated donor/acceptor	FALSE	canonical	1	1158	junction_6	170329.97752442822	NA	0	NA	TRUE	NA	NA	NA	B	coding	265	798	126	923	45.0	-14	True	AATAAA	-9
PB.10255.6	chr6	+	3582	5	incomplete-splice_match	LTV1	ENST00000367576.5	1847	11	-3	3462	-3	-3462	intron_retention	FALSE	canonical	1	254400	junction_1	48247.46626702277	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	138	707	45.0	-26	True	AATAAA	-9
PB.10255.1	chr6	+	2175	10	novel_in_catalog	AL049844.1	novel	762	5	NA	NA	36229	19193	intron_retention	FALSE	canonical	1	254400	junction_1	167365.98290270235	NA	0	NA	TRUE	NA	NA	NA	B	coding	260	783	1110	1892	30.0	-46	True	ATTAAA	-22
PB.11712.20	chr9	+	4488	4	full-splice_match	AKAP2	ENST00000259318.7	3101	4	8	-1395	8	297	multi-exon	FALSE	canonical	1	30860	junction_1	158268.51259173444	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	200	2779	80.0	-4	True	NA	NA
PB.10255.3	chr6	+	3919	5	incomplete-splice_match	LTV1	ENST00000367576.5	1847	11	-11	3133	-11	-3133	intron_retention	FALSE	canonical	1	254400	junction_1	48247.46626702277	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	146	715	75.0	-34	True	AATACA	-11
PB.10255.2	chr6	+	1500	10	novel_not_in_catalog	AL049844.1	novel	762	5	NA	NA	36234	18561	any annotated donor/acceptor	FALSE	canonical	1	17835	junction_5	183144.60426776178	NA	0	NA	TRUE	NA	NA	NA	B	coding	189	570	153	722	30.0	-41	True	AATACA	-2
PB.9037.10	chr4	+	3555	9	full-splice_match	GUCY1A1	ENST00000513574.1	2656	9	62	-961	62	763	multi-exon	FALSE	canonical	1	15400	junction_1	55802.64180336246	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	321	2393	30.0	2	True	ATTAAA	-19
PB.3322.22	chr14	-	4931	12	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	135810	junction_10	472475.4875454973	NA	3	1	TRUE	NA	NA	NA	C	coding	189	570	3782	4351	20.0	-20	True	AATAAA	-16
PB.3322.23	chr14	-	3330	16	incomplete-splice_match	ACIN1	ENST00000457657.5	4815	18	467	2740	6	195	3prime_fragment	FALSE	canonical	1	248155	junction_13	384025.7684905128	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3294	36	3329	45.0	-12	True	AAGAAA	-10
PB.3322.24	chr14	-	3416	17	incomplete-splice_match	ACIN1	ENST00000605057.5	4474	19	25	2755	25	180	3prime_fragment	FALSE	canonical	1	194763	junction_13	396498.86301755626	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3399	17	3415	60.0	7	True	NA	NA
PB.3322.25	chr14	-	3387	17	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	17	179	combination_of_known_junctions	FALSE	canonical	1	194763	junction_13	412394.46828415996	NA	1	1	TRUE	NA	NA	NA	C	coding	1121	3363	25	3387	65.0	-1	True	NA	NA
PB.3322.26	chr14	-	3335	17	novel_not_in_catalog	ACIN1	novel	2751	12	NA	NA	258	179	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	429176.3996122353	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3267	69	3335	65.0	240	False	NA	NA
PB.3322.27	chr14	-	3267	16	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	17	179	combination_of_known_junctions	FALSE	canonical	1	227430	junction_6	405301.37872284616	NA	5	NA	TRUE	NA	NA	NA	C	coding	1081	3243	25	3267	65.0	-1	True	NA	NA
PB.3322.28	chr14	-	3493	1	novel_in_catalog	ACIN1	novel	4474	19	NA	NA	17	-13847	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	52	159	327	485	85.0	-1	True	NA	NA
PB.3322.29	chr14	-	3332	1	novel_in_catalog	ACIN1	novel	4474	19	NA	NA	26	-13999	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	52	159	318	476	30.0	8	True	NA	NA
PB.3459.10	chr14	+	2307	16	full-splice_match	TMEM260	ENST00000261556.10	4264	16	26	1931	-6	-268	multi-exon	FALSE	canonical	1	51230	junction_10	19510.049292494255	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	97	2220	60.0	-7	True	AAGAAA	-12
PB.3459.11	chr14	+	2357	14	novel_in_catalog	TMEM260	novel	662	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	12510	junction_8	29525.466418112694	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	96	1070	65.0	-6	True	NA	NA
PB.8886.1	chr4	+	3199	13	full-splice_match	PDLIM5	ENST00000317968.8	6083	13	-20	2904	-4	-162	multi-exon	FALSE	canonical	1	359508	junction_7	148693.54131195103	NA	2	NA	TRUE	NA	NA	NA	C	coding	596	1791	157	1947	60.0	-3468	False	NA	NA
PB.9579.27	chr5	+	3129	12	novel_in_catalog	G3BP1	novel	535	4	NA	NA	-11	19	combination_of_known_junctions	FALSE	canonical	1	27835	junction_1	357150.27988368104	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	451	1851	30.0	-4647	False	ATTAAA	-38
PB.4832.9	chr17	-	3889	5	novel_not_in_catalog	USP22	novel	5220	13	NA	NA	-2814	0	intron_retention	FALSE	non_canonical	0	0	junction_2	631580.8782421991	NA	23	NA	TRUE	NA	NA	NA	C	coding	132	399	57	455	20.0	7918	False	AATAAA	-16
PB.8886.3	chr4	+	6091	13	full-splice_match	PDLIM5	ENST00000317968.8	6083	13	-11	3	5	-3	multi-exon	FALSE	canonical	1	359508	junction_7	148693.54131195103	NA	8	NA	TRUE	NA	NA	NA	C	coding	596	1791	148	1938	20.0	-3459	False	AATAAA	-20
PB.11125.1	chr8	+	2081	4	full-splice_match	UBE2V2	ENST00000523111.6	4373	4	13	2279	-2	859	multi-exon	FALSE	canonical	1	699726	junction_1	68940.94818192032	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	43	480	65.0	-18	True	NA	NA
PB.4832.2	chr17	-	3803	4	novel_in_catalog	USP22	novel	5220	13	NA	NA	-26	-2	intron_retention	FALSE	canonical	0	0	junction_1	500947.55525925284	NA	3	1	TRUE	NA	NA	NA	C	coding	117	354	231	584	15.0	-2	True	AATAAA	-18
PB.4832.5	chr17	-	5147	13	full-splice_match	USP22	ENST00000261497.8	5220	13	68	5	68	-1	multi-exon	FALSE	canonical	1	850889	junction_12	298845.56648775784	NA	5	NA	TRUE	NA	NA	NA	C	coding	525	1578	137	1714	20.0	36	True	AATAAA	-15
PB.4832.6	chr17	-	4940	13	novel_in_catalog	USP22	novel	5220	13	NA	NA	-43	-2	intron_retention	FALSE	canonical	1	8758	junction_12	467227.34573940287	NA	2	NA	TRUE	NA	NA	NA	C	coding	420	1263	242	1504	15.0	1114	False	AATAAA	-18
PB.303.1	chr1	-	2838	17	full-splice_match	SF3A3	ENST00000373019.4	3673	17	828	7	-18	-7	multi-exon	FALSE	canonical	1	226807	junction_2	182529.00217824974	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	129	1634	45.0	9332	False	AATAAA	-11
PB.1663.3	chr10	-	2097	16	incomplete-splice_match	AFAP1L2	ENST00000304129.8	3705	19	-41	4523	-38	1169	3prime_fragment	FALSE	canonical	1	61963	junction_15	24768.823205706718	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2025	72	2096	65.0	-1	True	NA	NA
PB.4680.8	chr17	-	2707	6	full-splice_match	UBE2G1	ENST00000396981.6	3974	6	-159	1426	-13	1295	multi-exon	FALSE	canonical	1	499122	junction_5	170247.27137361118	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	326	838	25.0	33	True	NA	NA
PB.1663.1	chr10	-	3745	19	full-splice_match	AFAP1L2	ENST00000304129.8	3705	19	-43	3	-40	-1	multi-exon	TRUE	canonical	1	61963	junction_18	30864.920234170837	NA	3	1	TRUE	NA	NA	NA	C	coding	818	2457	74	2530	20.0	-3	True	AATAAA	-16
PB.3161.15	chr13	-	2522	6	novel_not_in_catalog	RCBTB2	novel	3232	15	NA	NA	100	-1162	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	40558.681095913365	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	272	676	65.0	-1	True	NA	NA
PB.3161.13	chr13	-	1451	2	novel_not_in_catalog	RCBTB2	novel	3232	15	NA	NA	-83	-1	any annotated donor/acceptor	FALSE	canonical	1	21322	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-16
PB.3161.10	chr13	-	3016	14	novel_in_catalog	RCBTB2	novel	3232	15	NA	NA	53	0	no_combination_of_known_junctions	FALSE	canonical	1	1765	junction_13	46716.78292958475	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	220	1875	40.0	2767	False	AATAAA	-17
PB.3161.11	chr13	-	2997	13	novel_not_in_catalog	RCBTB2	novel	3232	15	NA	NA	76	0	any annotated donor/acceptor	FALSE	canonical	1	2521	junction_6	54581.8228493292	NA	6	NA	TRUE	NA	NA	NA	C	coding	219	660	1197	1856	40.0	2790	False	AATAAA	-17
PB.4680.1	chr17	-	4093	6	full-splice_match	UBE2G1	ENST00000396981.6	3974	6	-120	1	23	-1	multi-exon	FALSE	canonical	1	499122	junction_5	170247.27137361118	NA	7	NA	TRUE	NA	NA	NA	C	coding	170	513	287	799	20.0	72	False	AATAAA	-19
PB.11125.4	chr8	+	1204	4	full-splice_match	UBE2V2	ENST00000523111.6	4373	4	31	3138	-11	0	multi-exon	FALSE	canonical	1	699726	junction_1	68940.94818192032	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	25	462	25.0	0	True	AATAAA	-20
PB.4680.3	chr17	-	3926	5	full-splice_match	UBE2G1	ENST00000571980.1	984	5	95	-3037	-51	-1	multi-exon	FALSE	canonical	1	41408	junction_3	364646.3498633813	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	315	632	20.0	141	False	AATAAA	-19
PB.2014.1	chr11	+	2777	18	full-splice_match	MARK2	ENST00000502399.7	2885	18	108	0	108	0	multi-exon	FALSE	canonical	1	205819	junction_14	80608.8546679513	NA	0	NA	TRUE	NA	NA	NA	A	coding	778	2337	105	2441	90.0	225	False	AAGAAA	-13
PB.4680.5	chr17	-	3860	4	full-splice_match	UBE2G1	ENST00000574633.5	863	4	-22	-2975	-19	-2	multi-exon	FALSE	canonical	1	13410	junction_2	368237.0346188565	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	27	True	AATAAA	-18
PB.4680.4	chr17	-	4150	7	novel_not_in_catalog	UBE2G1	novel	3974	6	NA	NA	-42	-2	any annotated donor/acceptor	FALSE	canonical	1	651	junction_6	391462.8710514007	NA	3	NA	TRUE	NA	NA	NA	C	coding	99	300	558	857	20.0	-7	True	AATAAA	-18
PB.4680.7	chr17	-	3818	5	novel_in_catalog	UBE2G1	novel	3974	6	NA	NA	-26	-3	no_combination_of_known_junctions	FALSE	canonical	1	5781	junction_2	326409.7808449526	NA	3	NA	TRUE	NA	NA	NA	C	coding	88	267	193	459	20.0	9	True	AATAAA	-17
PB.3622.5	chr14	-	4756	11	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	0	37603	0	12239	3prime_fragment	FALSE	canonical	1	60673	junction_10	34074.71120053698	NA	6	NA	TRUE	NA	NA	NA	C	coding	1460	4380	375	4754	75.0	-23	True	NA	NA
PB.9384.7	chr5	+	3344	23	full-splice_match	WDR36	ENST00000513710.3	3140	23	32	-236	-1	236	multi-exon	FALSE	canonical	1	149231	junction_4	70880.2157757825	NA	2	NA	TRUE	NA	NA	NA	C	coding	895	2688	112	2799	50.0	-2	True	TATAAA	-13
PB.9384.6	chr5	+	4276	23	full-splice_match	WDR36	ENST00000513710.3	3140	23	30	-1166	-3	1166	multi-exon	FALSE	canonical	1	149231	junction_4	70880.2157757825	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	114	2801	40.0	-4	True	AATAAA	-10
PB.9384.5	chr5	+	5631	23	full-splice_match	WDR36	ENST00000612402.4	6592	23	167	794	-8	-794	multi-exon	FALSE	canonical	1	149231	junction_4	70880.2157757825	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	119	2806	40.0	-9	True	NA	NA
PB.9384.4	chr5	+	6362	23	full-splice_match	WDR36	ENST00000612402.4	6592	23	169	61	-6	-61	multi-exon	FALSE	canonical	1	149231	junction_4	70880.2157757825	NA	1	NA	TRUE	NA	NA	NA	C	coding	895	2688	117	2804	20.0	-7	True	ATTAAA	-17
PB.2728.8	chr12	+	3630	6	novel_not_in_catalog	RASSF3	novel	1060	6	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	1433	junction_2	191841.62790635403	NA	3	NA	TRUE	NA	NA	NA	C	coding	168	507	470	976	15.0	0	True	ATTAAA	-17
PB.2728.9	chr12	+	3347	5	novel_not_in_catalog	RASSF3	novel	1060	6	NA	NA	312	-2	any annotated donor/acceptor	FALSE	canonical	1	1653	junction_1	171132.37196027525	NA	11	1	TRUE	NA	NA	NA	C	coding	226	681	14	694	10.0	-9493	False	ATTAAA	-16
PB.9384.1	chr5	+	3099	23	full-splice_match	WDR36	ENST00000513710.3	3140	23	34	7	1	-7	multi-exon	FALSE	canonical	1	149231	junction_4	70880.2157757825	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	110	2797	60.0	0	True	NA	NA
PB.2728.4	chr12	+	3449	5	full-splice_match	RASSF3	ENST00000542104.5	3492	5	-62	105	-62	-105	multi-exon	FALSE	canonical	1	285720	junction_1	57566.02840814624	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	183	899	20.0	8	True	AGTAAA	-19
PB.2728.5	chr12	+	3316	4	full-splice_match	RASSF3	ENST00000283172.8	1099	4	-62	-2155	-62	0	multi-exon	FALSE	canonical	1	12602	junction_2	174797.03900301695	NA	4	NA	TRUE	NA	NA	NA	C	coding	126	381	1112	1492	15.0	8	True	ATTAAA	-18
PB.2728.6	chr12	+	2964	5	full-splice_match	RASSF3	ENST00000542104.5	3492	5	-45	573	-45	-573	multi-exon	FALSE	canonical	1	285720	junction_1	57566.02840814624	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	166	882	25.0	-27	True	AGTAAA	-14
PB.2728.7	chr12	+	2733	5	full-splice_match	RASSF3	ENST00000542104.5	3492	5	-59	818	-59	-818	multi-exon	FALSE	canonical	1	285720	junction_1	57566.02840814624	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	180	896	60.0	11	True	NA	NA
PB.10361.1	chr7	+	1728	3	full-splice_match	AC091729.3	ENST00000423008.1	1401	3	52	-379	52	379	multi-exon	FALSE	canonical	1	9221	junction_1	19618.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-36	True	NA	NA
PB.2728.1	chr12	+	3653	6	novel_not_in_catalog	RASSF3	novel	1060	6	NA	NA	-72	-4	intron_retention	FALSE	canonical	1	1319	junction_3	188073.30381784652	NA	4	NA	TRUE	NA	NA	NA	C	coding	269	810	193	1002	15.0	-2	True	ATTAAA	-14
PB.2728.2	chr12	+	3503	5	full-splice_match	RASSF3	ENST00000542104.5	3492	5	-9	-2	-9	2	multi-exon	FALSE	canonical	1	285720	junction_1	57566.02840814624	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	130	846	20.0	9	True	ATTAAA	-20
PB.2728.3	chr12	+	3209	3	novel_in_catalog	RASSF3	novel	1060	6	NA	NA	-64	-1	intron_retention	FALSE	canonical	1	3054	junction_1	215836.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	126	381	1006	1386	15.0	6	True	ATTAAA	-17
PB.6903.5	chr2	-	1445	14	full-splice_match	HIBCH	ENST00000359678.9	1939	14	221	273	66	108	multi-exon	FALSE	canonical	1	102946	junction_6	64463.51859718017	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	90	1235	30.0	1	True	NA	NA
PB.2066.1	chr11	-	3294	2	novel_not_in_catalog	AP5B1	novel	4811	2	NA	NA	2534	1994	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	coding	136	411	3	413	15.0	2707	False	NA	NA
PB.3357.4	chr14	+	2957	10	full-splice_match	NFATC4	ENST00000554050.5	3057	10	100	0	50	0	multi-exon	FALSE	canonical	1	20300	junction_9	79472.61094098883	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	222	2606	15.0	-66	False	AATAAA	-18
PB.2066.3	chr11	-	3356	1	genic	AP5B1	novel	NA	NA	NA	NA	-174	-1728	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	821	2466	656	3121	20.0	-1	True	NA	NA
PB.2066.2	chr11	-	3080	2	full-splice_match	AP5B1	ENST00000532090.2	4811	2	3	1728	3	-1728	multi-exon	FALSE	canonical	1	133529	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2637	209	2845	20.0	8	True	NA	NA
PB.3357.1	chr14	+	4093	9	full-splice_match	NFATC4	ENST00000553708.5	5367	9	-274	1548	-3	0	multi-exon	FALSE	canonical	1	101852	junction_1	59198.1656134715	NA	2	NA	TRUE	NA	NA	NA	C	coding	901	2706	275	2980	15.0	-119	False	AATAAA	-18
PB.2066.4	chr11	-	3092	2	full-splice_match	AP5B1	ENST00000532090.2	4811	2	-149	1868	-149	-1868	multi-exon	FALSE	canonical	1	133529	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	878	2637	361	2997	0.0	24	True	NA	NA
PB.3357.3	chr14	+	4011	10	novel_in_catalog	NFATC4	novel	1495	5	NA	NA	43	0	intron_retention	FALSE	canonical	1	4124	junction_2	83515.72995653476	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	2347	3660	15.0	-73	False	AATAAA	-18
PB.3357.2	chr14	+	3215	10	full-splice_match	NFATC4	ENST00000250373.8	4749	10	-14	1548	0	0	multi-exon	FALSE	canonical	1	101852	junction_1	58958.71879355739	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	156	2864	15.0	0	True	AATAAA	-18
PB.11768.6	chr9	+	2019	9	full-splice_match	MRRF	ENST00000470366.5	1186	9	-50	-783	-11	0	multi-exon	FALSE	canonical	1	37145	junction_4	45885.811695310564	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	92	598	20.0	-18	True	AATAAA	-23
PB.3817.4	chr15	+	2970	13	full-splice_match	ADAL	ENST00000562188.6	2264	13	16	-722	-1	-37	multi-exon	FALSE	canonical	1	14912	junction_3	31017.929371910584	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	576	1643	80.0	1	True	NA	NA
PB.3817.2	chr15	+	2235	13	full-splice_match	ADAL	ENST00000562188.6	2264	13	9	20	-8	-20	multi-exon	FALSE	canonical	1	14912	junction_3	31017.929371910584	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	583	1650	90.0	-6	True	NA	NA
PB.3817.3	chr15	+	1716	11	incomplete-splice_match	ADAL	ENST00000562188.6	2264	13	15	3137	-2	1	3prime_fragment	FALSE	canonical	1	14912	junction_3	32982.464876961516	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	577	1380	20.0	0	True	ATTAAA	-17
PB.3817.1	chr15	+	1628	11	novel_not_in_catalog	ADAL	novel	2264	13	NA	NA	-29	10	any annotated donor/acceptor	TRUE	canonical	1	5501	junction_1	41792.704552828356	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	480	1283	25.0	-44	False	ATTAAA	-26
PB.7645.1	chr22	+	892	4	novel_not_in_catalog	IGLV2-14	novel	402	2	NA	NA	0	147582	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	2135103.131192652	NA	2	1	TRUE	NA	NA	NA	B	coding	146	441	42	482	25.0	0	True	AATAAA	-31
PB.7645.3	chr22	+	2324	2	novel_not_in_catalog	IGLV4-3	novel	403	2	NA	NA	-14959	34765	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-31
PB.7645.2	chr22	+	2208	3	novel_not_in_catalog	IGLV2-14	novel	402	2	NA	NA	0	147582	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	2578101.5	NA	4	1	TRUE	NA	NA	NA	B	coding	131	396	42	437	25.0	0	True	AATAAA	-31
PB.7645.5	chr22	+	2214	2	novel_not_in_catalog	IGLL5	novel	1050	3	NA	NA	-11	-5660	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-12	True	NA	NA
PB.7645.4	chr22	+	2362	1	novel_in_catalog	IGLL5	novel	1050	3	NA	NA	24	-5660	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-26	True	NA	NA
PB.9219.1	chr5	-	4060	9	full-splice_match	EMB	ENST00000303221.9	4281	9	124	97	107	-97	multi-exon	FALSE	canonical	1	18693	junction_2	158548.84073527626	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	93	1076	25.0	2101	False	AATAAA	-13
PB.9219.2	chr5	-	4017	9	novel_not_in_catalog	EMB	novel	4281	9	NA	NA	92	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	174676.10464366435	NA	8	1	TRUE	NA	NA	NA	C	coding	277	834	105	938	15.0	-4	True	AATAAA	-23
PB.9219.3	chr5	-	1863	9	full-splice_match	EMB	ENST00000303221.9	4281	9	-33	2451	-33	34	multi-exon	FALSE	canonical	1	18693	junction_2	158548.84073527626	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	457	1233	40.0	1944	False	AATAAA	-34
PB.1673.8	chr10	+	1892	10	novel_in_catalog	FAM45A	novel	992	2	NA	NA	6	-1	intron_retention	FALSE	canonical	1	78	junction_4	43750.518526451015	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	626	1366	100.0	-3	True	NA	NA
PB.1673.9	chr10	+	2070	11	novel_in_catalog	FAM45A	novel	992	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	78	junction_5	41965.95990383158	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	804	1544	100.0	4	True	NA	NA
PB.8123.5	chr3	-	3587	21	novel_not_in_catalog	UBA7	novel	3299	24	NA	NA	40	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	116917.49407663508	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	2174	3490	35.0	53	True	NA	NA
PB.2770.18	chr12	-	1420	13	full-splice_match	NAP1L1	ENST00000549596.5	1838	13	-1	419	-1	-3	multi-exon	FALSE	canonical	1	954408	junction_2	1463784.5808255526	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	141	1247	35.0	-2	True	AATAAA	-18
PB.2770.17	chr12	-	1366	14	full-splice_match	NAP1L1	ENST00000535020.6	1686	14	-117	437	0	2	multi-exon	FALSE	canonical	1	156305	junction_1	1596724.715736175	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	184	1335	25.0	889	False	AATAAA	-18
PB.1673.5	chr10	+	1894	10	novel_in_catalog	FAM45A	novel	992	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	78	junction_4	43907.25061302588	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	628	1368	100.0	-21	True	NA	NA
PB.2770.15	chr12	-	1928	15	full-splice_match	NAP1L1	ENST00000618691.4	13505	15	380	11197	6	-150	multi-exon	FALSE	canonical	1	954408	junction_4	1405557.257375595	NA	3	NA	TRUE	NA	NA	NA	C	coding	391	1176	108	1283	30.0	-9	True	AATAAA	-19
PB.2770.14	chr12	-	1490	16	novel_in_catalog	NAP1L1	novel	13505	15	NA	NA	130	2	combination_of_known_junctions	FALSE	canonical	1	45880	junction_15	1513889.9059068053	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	153	1328	35.0	-23	True	AATAAA	-18
PB.2770.13	chr12	-	1508	16	novel_in_catalog	NAP1L1	novel	13505	15	NA	NA	-1	10	combination_of_known_junctions	FALSE	canonical	1	169678	junction_1	1514018.8986743065	NA	4	NA	TRUE	NA	NA	NA	C	coding	391	1176	191	1366	40.0	882	False	AATAAA	-26
PB.2770.12	chr12	-	2191	15	full-splice_match	NAP1L1	ENST00000618691.4	13505	15	318	10996	14	12	multi-exon	FALSE	canonical	1	954408	junction_4	1405557.257375595	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	170	1345	35.0	903	False	AATAAA	-28
PB.2770.11	chr12	-	1415	16	full-splice_match	NAP1L1	ENST00000393263.7	1896	16	39	442	-15	-1	multi-exon	FALSE	canonical	1	954408	junction_5	1361761.3818602955	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	82	1257	35.0	991	False	AATAAA	-14
PB.1673.3	chr10	+	2325	9	full-splice_match	FAM45A	ENST00000361432.2	1648	9	-3	-674	-3	43	multi-exon	FALSE	canonical	1	78	junction_3	12964.833162732948	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	30	1103	30.0	1	True	ATTAAA	-22
PB.8062.3	chr3	+	3767	30	incomplete-splice_match	KIF15	ENST00000326047.8	4842	35	57	10047	53	-9807	3prime_fragment	FALSE	canonical	1	71410	junction_6	29100.27276649522	NA	0	NA	TRUE	NA	NA	NA	C	coding	1225	3675	93	3767	70.0	-20	True	AATAGA	-38
PB.8062.2	chr3	+	4059	33	incomplete-splice_match	KIF15	ENST00000326047.8	4842	35	39	1332	35	-1092	3prime_fragment	FALSE	canonical	1	71410	junction_6	29974.675819504286	NA	0	NA	TRUE	NA	NA	NA	C	coding	1316	3948	111	4058	55.0	-77	False	AAAAAG	-34
PB.8062.1	chr3	+	3872	31	incomplete-splice_match	KIF15	ENST00000326047.8	4842	35	57	5192	53	-4952	3prime_fragment	FALSE	canonical	1	71410	junction_6	28702.482064739048	NA	3	NA	TRUE	NA	NA	NA	C	coding	1260	3780	93	3872	20.0	-20	True	AAGAAA	-36
PB.11646.13	chr9	-	4444	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-7	2	intron_retention	FALSE	canonical	1	3159	junction_34	404499.88305973157	NA	3	1	TRUE	NA	NA	NA	C	coding	1262	3789	192	3980	40.0	-13	True	AATAAA	-14
PB.8062.7	chr3	+	4748	35	full-splice_match	KIF15	ENST00000326047.8	4842	35	79	15	-66	-8	multi-exon	FALSE	canonical	1	71410	junction_6	33244.288389525675	NA	1	NA	TRUE	NA	NA	NA	C	coding	1388	4167	71	4237	55.0	2	True	AATAAA	-11
PB.8062.6	chr3	+	2756	21	incomplete-splice_match	KIF15	ENST00000326047.8	4842	35	57	27108	53	-1337	3prime_fragment	FALSE	canonical	1	71410	junction_6	19931.0223684085	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2664	93	2756	65.0	-20	True	AAGAAA	-14
PB.8062.5	chr3	+	3410	27	incomplete-splice_match	KIF15	ENST00000326047.8	4842	35	57	14840	53	10931	3prime_fragment	FALSE	canonical	1	71410	junction_6	25895.05029172461	NA	0	NA	TRUE	NA	NA	NA	C	coding	1106	3318	93	3410	35.0	-20	True	NA	NA
PB.8062.4	chr3	+	3561	29	incomplete-splice_match	KIF15	ENST00000326047.8	4842	35	57	12139	53	-11899	3prime_fragment	FALSE	canonical	1	71410	junction_6	28977.561158905562	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3468	93	3560	65.0	-20	True	NA	NA
PB.11646.18	chr9	-	4220	33	novel_in_catalog	IARS	novel	4656	34	NA	NA	-1	2	intron_retention	FALSE	canonical	1	1574	junction_3	383299.85470772727	NA	0	NA	TRUE	NA	NA	NA	C	coding	1220	3663	94	3756	40.0	-2	True	AATAAA	-14
PB.11646.19	chr9	-	4207	33	full-splice_match	IARS	ENST00000447699.6	4186	33	-19	-2	2	2	multi-exon	FALSE	canonical	1	6522	junction_31	378341.0747164116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1152	3459	285	3743	40.0	5168	False	AATAAA	-14
PB.8062.9	chr3	+	4208	35	full-splice_match	KIF15	ENST00000326047.8	4842	35	79	555	-66	-315	multi-exon	FALSE	canonical	1	71410	junction_6	33244.288389525675	NA	0	NA	TRUE	NA	NA	NA	C	coding	1379	4137	71	4207	70.0	2	True	NA	NA
PB.8062.8	chr3	+	3515	28	novel_not_in_catalog	KIF15	novel	4842	35	NA	NA	69	10931	any annotated donor/acceptor	FALSE	canonical	1	1755	junction_1	38013.70226807959	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3027	489	3515	35.0	-4	True	NA	NA
PB.5424.10	chr18	-	4505	25	novel_in_catalog	NPC1	novel	890	4	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	32062	junction_18	101308.49088547839	NA	0	NA	TRUE	NA	NA	NA	C	coding	1295	3888	140	4027	55.0	-20	True	AATAAA	-25
PB.5424.11	chr18	-	4065	24	incomplete-splice_match	NPC1	ENST00000269228.9	5157	25	413	1749	2	16	3prime_fragment	FALSE	canonical	1	186914	junction_23	86540.3729452602	NA	0	NA	TRUE	NA	NA	NA	C	coding	1262	3789	143	3931	25.0	-23	True	AGTAAA	-35
PB.5424.12	chr18	-	4634	23	incomplete-splice_match	NPC1	ENST00000269228.9	5157	25	424	2097	13	-332	3prime_fragment	FALSE	canonical	1	186914	junction_22	88283.57400479387	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	132	3788	10.0	-12	True	NA	NA
PB.5897.4	chr19	-	3690	3	full-splice_match	C19orf12	ENST00000323670.13	2464	3	6	-1232	6	-696	multi-exon	FALSE	canonical	1	49740	junction_1	1704.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	135	560	45.0	12	True	NA	NA
PB.5897.6	chr19	-	2128	3	full-splice_match	C19orf12	ENST00000323670.13	2464	3	-10	346	-10	3	multi-exon	FALSE	canonical	1	49740	junction_1	1704.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	151	576	25.0	-4	True	AATAAA	-18
PB.5897.7	chr19	-	1956	2	full-splice_match	C19orf12	ENST00000392276.1	1912	2	-41	-3	-8	3	multi-exon	FALSE	canonical	1	24034	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-18
PB.5897.1	chr19	-	4080	2	full-splice_match	C19orf12	ENST00000392276.1	1912	2	-43	-2125	-10	-152	multi-exon	FALSE	canonical	1	24034	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-4	True	NA	NA
PB.5897.2	chr19	-	4246	3	full-splice_match	C19orf12	ENST00000323670.13	2464	3	-7	-1775	-7	-153	multi-exon	FALSE	canonical	1	49740	junction_1	1704.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	141	426	148	573	25.0	-1	True	NA	NA
PB.5897.3	chr19	-	3508	2	full-splice_match	C19orf12	ENST00000392276.1	1912	2	-53	-1543	1	-734	multi-exon	FALSE	canonical	1	24034	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-14	True	NA	NA
PB.4701.1	chr17	-	2666	4	novel_not_in_catalog	ZNF594	novel	4335	2	NA	NA	-16	5512	any annotated donor/acceptor	FALSE	canonical	1	809	junction_2	5336.310231694639	NA	5	2	TRUE	NA	NA	NA	C	coding	153	462	489	950	15.0	-45	False	ATTAAA	-17
PB.4701.3	chr17	-	2176	4	novel_not_in_catalog	ZNF594	novel	4335	2	NA	NA	0	5404	any annotated donor/acceptor	FALSE	canonical	1	762	junction_2	4827.395248877897	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-29	False	AAGAAA	-30
PB.4701.2	chr17	-	2202	4	novel_not_in_catalog	ZNF594	novel	4335	2	NA	NA	3	5404	any annotated donor/acceptor	FALSE	canonical	1	809	junction_2	4810.942411720274	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	133	594	75.0	-5	True	AAGAAA	-30
PB.4701.5	chr17	-	5158	2	full-splice_match	ZNF594	ENST00000576772.1	757	2	7	-4408	7	-7	multi-exon	FALSE	canonical	1	13495	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	807	2424	445	2868	35.0	-1	True	AATAAA	-9
PB.4701.4	chr17	-	4869	2	full-splice_match	ZNF594	ENST00000575779.1	4335	2	7	-541	7	-1	multi-exon	FALSE	canonical	1	12330	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	150	2573	25.0	-22	False	AATAAA	-15
PB.4701.7	chr17	-	4458	2	full-splice_match	ZNF594	ENST00000576772.1	757	2	8	-3709	8	-164	multi-exon	FALSE	canonical	1	13495	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	444	2867	65.0	0	True	NA	NA
PB.4701.6	chr17	-	4622	2	full-splice_match	ZNF594	ENST00000576772.1	757	2	8	-3873	8	0	multi-exon	FALSE	canonical	1	13495	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	807	2424	444	2867	80.0	0	True	NA	NA
PB.6405.5	chr2	+	2525	17	novel_not_in_catalog	TTC27	novel	509	4	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	74008.05329953964	NA	31	2	TRUE	NA	NA	NA	C	coding	638	1917	198	2114	20.0	0	True	AATAAA	-15
PB.8838.25	chr4	+	9018	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	54	-6457	-4	1	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	4	NA	TRUE	NA	NA	NA	C	coding	425	1278	100	1377	0.0	-9467	False	CATAAA	-33
PB.8838.24	chr4	+	1995	10	novel_in_catalog	SEPT11	novel	5593	10	NA	NA	-6	323	combination_of_known_junctions	FALSE	canonical	1	11004	junction_9	364208.2739157519	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	145	1434	65.0	7	True	NA	NA
PB.11773.1	chr9	-	3573	18	full-splice_match	RC3H2	ENST00000423239.6	3623	18	8	42	8	-13	multi-exon	TRUE	canonical	1	114810	junction_17	53029.09081675087	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	292	3486	40.0	7978	False	AATAAA	-22
PB.8838.21	chr4	+	3611	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	2	-998	2	998	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	152	1429	75.0	0	True	NA	NA
PB.8838.20	chr4	+	7076	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	50	-1533	2	-5	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	152	1441	40.0	0	True	TTTAAA	-9
PB.8838.23	chr4	+	3739	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	51	1803	3	-1803	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	151	1440	15.0	1	True	AATAAA	-17
PB.8838.22	chr4	+	1830	10	novel_in_catalog	SEPT11	novel	5593	10	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	1	32797	junction_9	358767.1355614776	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	152	1429	40.0	0	True	TTTAAA	-9
PB.5422.16	chr18	+	4980	11	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	1	-1	intron_retention	FALSE	canonical	1	350772	junction_1	267794.5270883817	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	148	1164	5.0	6	True	ATTAAA	-20
PB.5422.17	chr18	+	2856	12	full-splice_match	RIOK3	ENST00000581302.5	3049	12	11	182	-5	-182	multi-exon	FALSE	canonical	1	350772	junction_1	258514.89776170312	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	138	1412	60.0	16	True	NA	NA
PB.5422.14	chr18	+	3457	12	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	5957	junction_11	325834.3960157655	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	152	1603	20.0	2	True	ATTAAA	-14
PB.5422.15	chr18	+	1917	13	full-splice_match	RIOK3	ENST00000339486.7	4038	13	466	1655	1	-15	multi-exon	FALSE	canonical	1	350772	junction_1	248043.23309197984	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	152	1711	45.0	2	True	AATAAA	-24
PB.5422.12	chr18	+	3295	12	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	27556	junction_6	383671.70643153065	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	154	852	20.0	0	True	ATTAAA	-13
PB.5926.1	chr19	-	2252	2	antisense	novelGene_LSR_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1590	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	191	576	368	943	30.0	NA	False	NA	NA
PB.5422.10	chr18	+	3446	12	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	27556	junction_6	329332.5848046054	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	154	852	5.0	0	True	ATTAAA	-21
PB.5422.11	chr18	+	3405	13	full-splice_match	RIOK3	ENST00000339486.7	4038	13	464	169	0	-166	multi-exon	FALSE	canonical	1	350772	junction_1	248043.23309197984	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	154	1713	50.0	0	True	AATAAA	-29
PB.19.7	chr1	+	1899	3	novel_not_in_catalog	AL391244.1	novel	797	3	NA	NA	-4	-6	any annotated donor/acceptor	FALSE	canonical	1	536	junction_1	89592.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-4	True	TATAAA	-14
PB.19.6	chr1	+	1728	3	full-splice_match	AL391244.1	ENST00000448629.5	797	3	22	-953	-8	-6	multi-exon	FALSE	canonical	1	55557	junction_1	62081.5	NA	2	1	TRUE	NA	NA	NA	C	coding	137	414	9	422	20.0	-8	True	TATAAA	-14
PB.19.5	chr1	+	2147	2	novel_not_in_catalog	AL391244.1	novel	797	3	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	8570	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-8	True	TATAAA	-19
PB.19.4	chr1	+	2068	2	full-splice_match	AL391244.1	ENST00000418833.2	2196	2	12	116	-10	-96	multi-exon	FALSE	canonical	1	179720	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-10	True	NA	NA
PB.19.3	chr1	+	2872	4	novel_not_in_catalog	AL391244.1	novel	797	3	NA	NA	-10	1826	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	74942.68926764416	NA	9	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-10	True	ATTAAA	-30
PB.3468.1	chr14	-	2084	5	incomplete-splice_match	TIMM9	ENST00000395159.6	1336	6	441	-1040	1	1040	5prime_fragment	FALSE	canonical	1	280618	junction_4	128143.19356168513	NA	0	NA	TRUE	NA	NA	NA	A	coding	102	309	1150	1458	30.0	-3	True	ATTAAA	-27
PB.19.1	chr1	+	2522	1	full-splice_match	AL391244.1	ENST00000572242.1	2228	1	-282	-12	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	1	True	TATAAA	-19
PB.5235.1	chr17	-	3436	4	novel_in_catalog	ATP5PD	novel	2191	2	NA	NA	8	-18	intron_retention	FALSE	canonical	1	984223	junction_1	271663.5720015966	NA	2	NA	TRUE	NA	NA	NA	A	coding	84	255	63	317	60.0	-14	True	NA	NA
PB.11025.1	chr8	-	2818	1	full-splice_match	AC037459.3	ENST00000521025.1	2750	1	462	-530	462	530	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	117	354	1663	2016	95.0	NA	False	NA	NA
PB.8904.28	chr4	-	1799	7	full-splice_match	UBE2D3	ENST00000357194.10	660	7	84	-1223	49	0	multi-exon	FALSE	canonical	1	11021	junction_6	448568.7474217921	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	69	518	15.0	-1	True	AATAAA	-19
PB.8133.1	chr3	-	1906	4	full-splice_match	HYAL2	ENST00000395139.7	2136	4	237	-7	237	-6	multi-exon	FALSE	canonical	1	181565	junction_3	214571.75540493568	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	158	1579	10.0	-4	True	ATTAAA	-22
PB.8133.2	chr3	-	2035	5	novel_not_in_catalog	HYAL2	novel	4054	3	NA	NA	234	1	any annotated donor/acceptor	FALSE	canonical	1	66	junction_2	252054.2010534391	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	161	1111	10.0	-7	True	ATTAAA	-16
PB.8133.3	chr3	-	2124	4	novel_in_catalog	HYAL2	novel	4054	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26351	junction_3	287605.15770332696	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	383	1804	10.0	8605	False	ATTAAA	-15
PB.316.1	chr1	-	3131	3	full-splice_match	MYCL	ENST00000397332.2	3256	3	118	7	-13	-7	multi-exon	FALSE	canonical	1	21591	junction_2	11652.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	394	1185	8	1192	30.0	-16	True	AATAAA	-10
PB.11233.6	chr8	-	3332	4	novel_in_catalog	TRIQK	novel	3672	5	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	1	9819	junction_3	100336.1743551259	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	10	True	NA	NA
PB.11405.2	chr8	+	1979	3	novel_in_catalog	MFSD3	novel	1548	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	342019	junction_1	53119.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	262	951	20.0	3	True	AATAAA	-23
PB.9352.6	chr5	+	3753	11	novel_in_catalog	RHOBTB3	novel	575	3	NA	NA	153	770	intron_retention	FALSE	canonical	1	16654	junction_5	149941.41057679828	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	356	1825	90.0	-8	True	NA	NA
PB.7463.1	chr21	-	1900	1	antisense	novelGene_USP25_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.3404.10	chr14	+	3083	16	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	1	26112	junction_4	124530.50276879512	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	752	2398	30.0	-5	True	AATAAA	-18
PB.3404.11	chr14	+	2217	13	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-5	1702	intron_retention	FALSE	canonical	1	48196	junction_3	110241.85505539879	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	855	1754	70.0	-5	True	AATATA	-12
PB.3404.12	chr14	+	3820	12	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	242642	junction_2	67872.00575999133	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	2313	3134	30.0	-2	True	AATAAA	-19
PB.3404.13	chr14	+	3706	13	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-2	2	intron_retention	FALSE	canonical	1	115365	junction_7	86630.91033047903	NA	2	NA	TRUE	NA	NA	NA	C	coding	273	822	2200	3021	30.0	-2	True	AATAAA	-18
PB.3404.14	chr14	+	3607	14	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	97543	junction_8	99973.37234602365	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	2100	2921	30.0	-2	True	AATAAA	-19
PB.2962.1	chr12	+	2546	1	antisense	novelGene_SPPL3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.3404.16	chr14	+	3259	14	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-1	-344	intron_retention	FALSE	canonical	1	97543	junction_8	99973.37234602365	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	2099	2920	60.0	-1	True	AAGAAA	-32
PB.3404.17	chr14	+	3623	13	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	0	-2	intron_retention	FALSE	canonical	1	48196	junction_3	99883.40757714577	NA	10	NA	TRUE	NA	NA	NA	C	coding	273	822	2116	2937	30.0	0	True	AATAAA	-19
PB.3404.18	chr14	+	3391	15	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	0	2	intron_retention	FALSE	canonical	1	26112	junction_4	127501.56559016785	NA	2	NA	TRUE	NA	NA	NA	C	coding	273	822	1885	2706	30.0	0	True	AATAAA	-18
PB.3404.19	chr14	+	3476	15	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	1	-2	intron_retention	FALSE	canonical	1	74471	junction_3	111105.19561761995	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	1969	2790	30.0	1	True	AATAAA	-19
PB.1173.1	chr1	+	2300	3	full-splice_match	SNAP47	ENST00000480897.5	2375	3	74	1	-5	-1	multi-exon	FALSE	canonical	1	11717	junction_1	2764.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-22	True	NA	NA
PB.781.4	chr1	-	2025	9	novel_in_catalog	KCNN3	novel	13033	8	NA	NA	-33	-15	intron_retention	FALSE	canonical	1	6173	junction_5	45001.300630509555	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	189	1490	85.0	-1	True	AAAACA	-21
PB.8397.3	chr3	+	3689	28	full-splice_match	ATP2C1	ENST00000507488.6	3579	28	-85	-25	-79	0	multi-exon	FALSE	canonical	1	81268	junction_1	253599.69699499517	NA	0	NA	TRUE	NA	NA	NA	C	coding	973	2922	306	3227	25.0	5	True	ATTAAA	-31
PB.781.6	chr1	-	2546	8	full-splice_match	KCNN3	ENST00000271915.8	13033	8	-7	10494	-7	3	multi-exon	FALSE	canonical	1	30104	junction_7	32564.363302010162	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	324	2519	30.0	-7	True	AATAAA	-23
PB.11270.28	chr8	-	3721	1	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	3386	4419	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	9530	False	NA	NA
PB.781.1	chr1	-	3082	8	full-splice_match	KCNN3	ENST00000271915.8	13033	8	-35	9986	-35	-15	multi-exon	FALSE	canonical	1	30104	junction_7	32564.363302010162	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	352	2547	85.0	18	False	AAAACA	-21
PB.781.2	chr1	-	1980	8	full-splice_match	KCNN3	ENST00000361147.8	1962	8	-33	15	-33	-15	multi-exon	FALSE	canonical	1	43896	junction_7	29440.210955460916	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	189	1445	85.0	-1	True	AAAACA	-21
PB.781.3	chr1	-	3114	9	full-splice_match	KCNN3	ENST00000618040.4	13057	9	-24	9967	-22	-15	multi-exon	FALSE	canonical	1	6173	junction_5	46170.92392878336	NA	2	NA	TRUE	NA	NA	NA	C	coding	746	2241	339	2579	85.0	4	True	AAAACA	-21
PB.11270.24	chr8	-	3343	10	full-splice_match	RNF19A	ENST00000341084.6	4285	10	384	558	-33	-558	multi-exon	FALSE	canonical	1	178962	junction_9	102818.61271838546	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	264	2687	60.0	-1	True	NA	NA
PB.11270.25	chr8	-	2709	10	full-splice_match	RNF19A	ENST00000341084.6	4285	10	321	1255	-96	288	multi-exon	FALSE	canonical	1	178962	junction_9	102818.61271838546	NA	2	NA	TRUE	NA	NA	NA	C	coding	794	2382	327	2708	50.0	0	True	ACTAAA	-27
PB.11270.26	chr8	-	2804	11	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-33	240	intron_retention	FALSE	canonical	1	3454	junction_10	173835.4780044626	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2334	470	2803	25.0	-1	True	AATAAA	-15
PB.11270.27	chr8	-	3173	2	incomplete-splice_match	RNF19A	ENST00000341084.6	4285	10	290	27924	111	2412	3prime_fragment	FALSE	canonical	1	178962	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	265	942	75.0	3419	False	ATTAAA	-33
PB.7388.11	chr20	-	2214	6	novel_not_in_catalog	PRELID3B	novel	2626	6	NA	NA	-14	-296	any annotated donor/acceptor	FALSE	canonical	1	11772	junction_1	340148.2130154442	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	94	648	35.0	-38	True	AATAAA	-28
PB.7388.10	chr20	-	2255	6	novel_not_in_catalog	PRELID3B	novel	2626	6	NA	NA	-9	-296	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	404220.39099501155	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	375	689	35.0	-33	True	AATAAA	-28
PB.7388.13	chr20	-	1412	6	full-splice_match	PRELID3B	ENST00000355937.8	2626	6	86	1128	-14	361	multi-exon	FALSE	canonical	1	299234	junction_4	237776.255104163	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	94	678	20.0	-38	True	AATAAA	-14
PB.7388.12	chr20	-	2242	6	full-splice_match	PRELID3B	ENST00000355937.8	2626	6	78	306	-22	-306	multi-exon	FALSE	canonical	1	299234	junction_4	237776.255104163	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	102	686	35.0	-46	True	AATAAA	-18
PB.8736.1	chr4	-	2313	1	novel_in_catalog	TLR1	novel	555	6	NA	NA	-10959	-13355	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	117	354	908	1261	85.0	-4	False	NA	NA
PB.10097.4	chr6	+	2633	21	novel_not_in_catalog	ORC3	novel	2470	19	NA	NA	-4	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	94203.6661532342	NA	14	2	TRUE	NA	NA	NA	C	coding	540	1623	597	2219	30.0	-9	True	AATAAA	-18
PB.11492.3	chr9	-	2353	5	novel_in_catalog	C9orf72	novel	3339	11	NA	NA	1	543	intron_retention	FALSE	canonical	1	20680	junction_4	72993.38350622953	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	62	730	50.0	-20	True	ATTAAA	-12
PB.11492.2	chr9	-	3196	11	full-splice_match	C9orf72	ENST00000380003.7	3200	11	4	0	2	0	multi-exon	FALSE	canonical	1	20680	junction_10	50766.05569167256	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	61	1506	10.0	-19	True	AATAAA	-17
PB.11492.1	chr9	-	6118	9	novel_in_catalog	C9orf72	novel	3339	11	NA	NA	-7	0	intron_retention	FALSE	canonical	1	20680	junction_8	52338.13617224418	NA	2	NA	TRUE	NA	NA	NA	C	coding	222	669	79	747	10.0	16	True	AATAAA	-17
PB.11492.5	chr9	-	1532	5	incomplete-splice_match	C9orf72	ENST00000644136.1	2678	12	9	13672	0	-279	3prime_fragment	FALSE	canonical	1	20680	junction_4	72993.38350622953	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	63	731	20.0	-21	True	AATAAA	-26
PB.11492.4	chr9	-	1885	5	incomplete-splice_match	C9orf72	ENST00000644136.1	2678	12	11	13317	2	76	3prime_fragment	FALSE	canonical	1	20680	junction_4	72993.38350622953	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	61	729	20.0	-19	True	NA	NA
PB.3238.11	chr13	+	2476	17	novel_not_in_catalog	TM9SF2	novel	1277	5	NA	NA	59	-2831	any annotated donor/acceptor	FALSE	canonical	1	2273	junction_16	464030.03885153664	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	132	2096	40.0	4	True	AATAAA	-26
PB.10433.3	chr7	+	2383	4	full-splice_match	NUPL2	ENST00000410002.7	680	4	-10	-1693	4	1693	multi-exon	FALSE	canonical	1	1081	junction_3	181964.69051317498	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	59	526	85.0	-20	True	NA	NA
PB.10433.2	chr7	+	1905	4	novel_not_in_catalog	NUPL2	novel	1795	7	NA	NA	0	2566	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	182471.5393339161	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	63	515	85.0	-24	True	NA	NA
PB.10433.1	chr7	+	4166	3	full-splice_match	NUPL2	ENST00000497500.5	739	3	-34	-3393	-20	2566	multi-exon	FALSE	canonical	1	361896	junction_2	23109.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	83	535	85.0	-44	True	NA	NA
PB.8038.50	chr3	+	1657	8	incomplete-splice_match	CTNNB1	ENST00000645982.1	2778	16	34234	-488	-177	0	5prime_fragment	FALSE	non_canonical	0	0	junction_7	1034521.5038789278	NA	3	NA	TRUE	NA	NA	NA	C	coding	302	909	106	1014	10.0	-9	True	ATTAAA	-15
PB.10433.5	chr7	+	1656	8	full-splice_match	NUPL2	ENST00000413919.1	1329	8	-27	-300	-1	-1	multi-exon	FALSE	canonical	1	14516	junction_6	149634.78371484272	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	50	1396	25.0	-11	True	AATAAA	-17
PB.10433.4	chr7	+	1588	7	full-splice_match	NUPL2	ENST00000258742.9	1795	7	204	3	7	0	multi-exon	TRUE	canonical	1	304498	junction_4	36258.16712901461	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	56	1327	25.0	-17	True	AATAAA	-18
PB.8591.1	chr3	+	2208	12	novel_not_in_catalog	LPP	novel	5835	7	NA	NA	3	8199	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	75622.22041424178	NA	1	NA	TRUE	NA	NA	NA	B	coding	612	1839	341	2179	70.0	-53	True	NA	NA
PB.1173.7	chr1	+	1905	5	full-splice_match	SNAP47	ENST00000617596.4	1905	5	1	-1	1	1	multi-exon	FALSE	canonical	1	166157	junction_1	122192.47183235144	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	92	1351	20.0	19	True	AATAAA	-19
PB.9133.3	chr5	+	2055	5	full-splice_match	SRD5A1	ENST00000274192.6	7132	5	251	4826	138	588	multi-exon	FALSE	canonical	1	51002	junction_4	9164.379875365272	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	251	763	40.0	-90	False	NA	NA
PB.10169.1	chr6	-	6430	39	full-splice_match	LAMA4	ENST00000230538.11	6547	39	122	-5	-5	5	multi-exon	FALSE	canonical	1	109876	junction_32	71747.20370747632	NA	0	NA	TRUE	NA	NA	NA	C	coding	1823	5472	277	5748	20.0	128	False	AATAAA	-19
PB.9980.3	chr6	-	3000	5	full-splice_match	TREML2	ENST00000483722.1	3302	5	91	211	91	-211	multi-exon	FALSE	canonical	1	20048	junction_4	14793.0337828317	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	96	1061	30.0	-1	True	NA	NA
PB.9133.2	chr5	+	2166	5	full-splice_match	SRD5A1	ENST00000274192.6	7132	5	-24	4990	-24	424	multi-exon	FALSE	canonical	1	51002	junction_4	9164.379875365272	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	259	1038	30.0	-365	False	NA	NA
PB.1937.13	chr11	-	3504	14	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-59	1098	combination_of_known_junctions	FALSE	canonical	1	17702	junction_1	155254.85327561627	NA	2	NA	TRUE	NA	NA	NA	C	coding	614	1845	73	1917	100.0	99	False	NA	NA
PB.9701.4	chr6	+	2184	10	incomplete-splice_match	RIPK1	ENST00000259808.8	4160	11	84	3989	84	-3989	3prime_fragment	FALSE	canonical	1	32151	junction_1	55356.142064335676	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	215	1999	45.0	0	True	NA	NA
PB.11298.10	chr8	+	2044	10	novel_in_catalog	EMC2	novel	533	6	NA	NA	9	-1	intron_retention	FALSE	canonical	1	496214	junction_4	69479.85228827132	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	14	712	40.0	9	True	AATAAA	-24
PB.3350.5	chr14	+	3845	9	novel_in_catalog	GMPR2	novel	1910	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	183154	junction_1	215579.92225473915	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	2801	3385	25.0	-32	True	AATAAA	-19
PB.10711.1	chr7	-	1215	4	full-splice_match	AZGP1	ENST00000292401.8	1307	4	91	1	-24	0	multi-exon	FALSE	canonical	1	1300344	junction_2	120762.24870380644	NA	0	NA	TRUE	NA	NA	NA	A	coding	295	888	56	943	35.0	-1	True	AATAAA	-23
PB.6416.10	chr2	-	2874	1	novel_in_catalog	CEBPZ	novel	3463	16	NA	NA	118	-114	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	107	321	2554	2874	70.0	357	False	NA	NA
PB.6819.2	chr2	-	1376	7	full-splice_match	SPC25	ENST00000282074.6	1354	7	-21	-1	-21	1	multi-exon	FALSE	canonical	1	215875	junction_1	58097.53497185191	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	164	838	40.0	-65	False	NA	NA
PB.2102.1	chr11	-	1800	2	full-splice_match	POLD4	ENST00000542982.1	809	2	-9	-982	0	-2	multi-exon	FALSE	canonical	1	1060444	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-16
PB.6819.1	chr2	-	4566	7	novel_not_in_catalog	SPC25	novel	510	5	NA	NA	0	9371	intron_retention	FALSE	canonical	1	5220	junction_1	125090.36011220049	NA	10	NA	TRUE	NA	NA	NA	C	coding	186	561	143	703	25.0	-44	True	AATATA	-14
PB.8411.4	chr3	-	2501	16	novel_not_in_catalog	RYK	novel	1258	7	NA	NA	-134	-469	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	119295.92176164279	NA	1	NA	TRUE	NA	NA	NA	B	coding	478	1437	515	1951	65.0	-20	True	AAGAAA	-26
PB.8411.1	chr3	-	2815	16	novel_not_in_catalog	RYK	novel	1258	7	NA	NA	-143	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	119295.92176164279	NA	0	NA	TRUE	NA	NA	NA	B	coding	478	1437	359	1795	35.0	-29	True	ATTAAA	-18
PB.7204.1	chr20	-	6759	2	full-splice_match	CD93	ENST00000246006.4	6708	2	-60	9	-60	-9	multi-exon	FALSE	canonical	1	200035	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	652	1959	209	2167	25.0	8661	False	AATAAA	-15
PB.8411.2	chr3	-	2967	16	novel_not_in_catalog	RYK	novel	1258	7	NA	NA	-137	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	119295.92176164279	NA	1	NA	TRUE	NA	NA	NA	B	coding	478	1437	512	1948	40.0	-23	True	ATTAAA	-17
PB.2247.8	chr11	-	3095	5	novel_not_in_catalog	TMEM123	novel	3321	4	NA	NA	511	0	any annotated donor/acceptor	FALSE	canonical	1	73	junction_4	962693.4167180056	NA	5	NA	TRUE	NA	NA	NA	C	coding	120	363	202	564	35.0	1214	False	AATAAA	-15
PB.2247.9	chr11	-	3173	6	novel_not_in_catalog	TMEM123	novel	3321	4	NA	NA	120	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	861250.6340597027	NA	4	NA	TRUE	NA	NA	NA	C	coding	177	534	110	643	35.0	5	True	AATAAA	-14
PB.1173.5	chr1	+	3666	4	incomplete-splice_match	SNAP47	ENST00000426344.5	2403	5	-1	7443	-1	-1218	3prime_fragment	TRUE	canonical	1	166157	junction_1	133361.1141000254	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	111	1682	10.0	0	True	AATAAA	-21
PB.4527.6	chr16	+	1705	11	full-splice_match	DDX19B	ENST00000355992.7	1692	11	-4	-9	-2	6	multi-exon	FALSE	canonical	1	3464	junction_10	168860.4883229052	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	109	1455	20.0	-4	True	AATACA	-25
PB.4527.5	chr16	+	1795	12	full-splice_match	DDX19B	ENST00000288071.10	3386	12	134	1457	-5	0	multi-exon	FALSE	canonical	1	3464	junction_11	160927.57918454605	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	112	1551	25.0	-7	True	AATACA	-19
PB.2247.3	chr11	-	3300	5	novel_not_in_catalog	TMEM123	novel	3321	4	NA	NA	32	3	any annotated donor/acceptor	FALSE	canonical	1	11795	junction_3	928152.5133900408	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	400	762	15.0	-43	True	AATAAA	-22
PB.4123.13	chr16	-	2451	11	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	1	-5	intron_retention	FALSE	canonical	1	84829	junction_8	284835.3075769224	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	1499	2356	25.0	-34	True	AATACA	-18
PB.4527.2	chr16	+	3213	12	full-splice_match	DDX19B	ENST00000288071.10	3386	12	121	52	-4	-52	multi-exon	FALSE	canonical	1	3464	junction_11	160927.57918454605	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	125	1564	20.0	-20	True	AAGAAA	-32
PB.4527.1	chr16	+	3125	11	novel_in_catalog	DDX19B	novel	726	8	NA	NA	4	-92	combination_of_known_junctions	FALSE	canonical	1	3464	junction_10	174546.62723650664	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	404	1516	60.0	-21	True	NA	NA
PB.2247.7	chr11	-	3163	5	novel_not_in_catalog	TMEM123	novel	3321	4	NA	NA	74	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	962724.2080292258	NA	9	NA	TRUE	NA	NA	NA	C	coding	120	363	270	632	35.0	-1	True	AATAAA	-15
PB.6155.10	chr19	-	2773	4	full-splice_match	NUP62	ENST00000594673.5	564	4	-68	-2141	1	-16	multi-exon	FALSE	canonical	1	7483	junction_2	28323.483240747224	NA	30	3	TRUE	NA	NA	NA	C	coding	522	1569	525	2093	100.0	3104	False	NA	NA
PB.6296.8	chr2	+	5494	9	novel_in_catalog	RNF144A	novel	5743	9	NA	NA	0	-165	combination_of_known_junctions	FALSE	canonical	1	3690	junction_1	39727.981080719415	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	359	1237	15.0	0	True	TATAAA	-18
PB.9352.7	chr5	+	4001	12	novel_not_in_catalog	RHOBTB3	novel	575	3	NA	NA	166	770	intron_retention	FALSE	canonical	1	8099	junction_9	150961.56665459563	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	343	2073	90.0	5	True	NA	NA
PB.8927.3	chr4	+	2629	1	novel_in_catalog	OSTC	novel	1077	4	NA	NA	16	1733	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.8927.2	chr4	+	5827	3	novel_in_catalog	OSTC	novel	1077	4	NA	NA	16	0	intron_retention	FALSE	canonical	1	373676	junction_1	115906.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	2	True	AATAAA	-15
PB.8927.1	chr4	+	1061	4	full-splice_match	OSTC	ENST00000361564.8	1077	4	13	3	12	-1	multi-exon	FALSE	canonical	1	373676	junction_2	127722.41670208961	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	60	509	25.0	-2	True	AATAAA	-14
PB.6155.11	chr19	-	2395	2	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	7	-11589	intron_retention	FALSE	canonical	1	36693	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	147	1715	100.0	-11	True	NA	NA
PB.6296.2	chr2	+	5611	9	full-splice_match	RNF144A	ENST00000320892.10	5743	9	44	88	44	-88	multi-exon	FALSE	canonical	1	68968	junction_1	21714.08647485544	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	399	1277	10.0	-3	True	AATACA	-14
PB.6296.3	chr2	+	5557	9	full-splice_match	RNF144A	ENST00000320892.10	5743	9	24	162	24	-162	multi-exon	FALSE	canonical	1	68968	junction_1	21714.08647485544	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	419	1297	15.0	-23	True	TATAAA	-21
PB.11687.1	chr9	+	4930	17	full-splice_match	INVS	ENST00000262457.6	3709	17	-47	-1174	-47	1174	multi-exon	TRUE	canonical	1	50524	junction_1	25738.692574285775	NA	2	NA	TRUE	NA	NA	NA	C	coding	1065	3198	233	3430	25.0	-6668	False	AATAAA	-15
PB.6296.1	chr2	+	2076	9	full-splice_match	RNF144A	ENST00000320892.10	5743	9	1	3666	1	856	multi-exon	FALSE	canonical	1	68968	junction_1	21714.08647485544	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	442	1320	10.0	-180	False	TTTAAA	-20
PB.6296.6	chr2	+	2057	9	novel_in_catalog	RNF144A	novel	5743	9	NA	NA	-26	853	combination_of_known_junctions	FALSE	canonical	1	3690	junction_1	39727.981080719415	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	426	1304	15.0	-67	False	TTTAAA	-17
PB.7436.7	chr21	-	3135	17	incomplete-splice_match	FP565260.1	ENST00000617716.3	3264	21	-11	3328	-11	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	106	2256	95.0	NA	False	NA	NA
PB.6296.4	chr2	+	5572	8	novel_in_catalog	RNF144A	novel	5743	9	NA	NA	25	0	no_combination_of_known_junctions	FALSE	canonical	1	7086	junction_2	41574.27473418471	NA	4	NA	TRUE	NA	NA	NA	C	coding	209	630	521	1150	0.0	-22	True	AATACA	-19
PB.6296.5	chr2	+	2719	9	full-splice_match	RNF144A	ENST00000320892.10	5743	9	31	2993	31	1529	multi-exon	FALSE	canonical	1	68968	junction_1	21714.08647485544	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	412	1290	45.0	-16	True	TATAAA	-6
PB.7138.14	chr20	+	2446	10	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	14	intron_retention	FALSE	canonical	1	1017501	junction_1	693672.2943335351	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	30	1031	65.0	0	True	NA	NA
PB.7138.15	chr20	+	2087	11	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1060969	junction_1	638963.1565713002	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	706	1992	20.0	0	True	AATAAA	-12
PB.7138.16	chr20	+	2022	12	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-413	intron_retention	FALSE	canonical	1	123795	junction_11	785128.5297485316	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	30	1466	80.0	0	True	NA	NA
PB.6155.13	chr19	-	2594	3	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	10	-11589	intron_retention	FALSE	canonical	1	4617	junction_2	173696.5	NA	14	NA	TRUE	NA	NA	NA	C	coding	522	1569	346	1914	100.0	1	True	NA	NA
PB.7138.10	chr20	+	2912	11	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	13	intron_retention	FALSE	canonical	1	1017501	junction_1	674330.2859144693	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	1548	2834	65.0	0	True	NA	NA
PB.7138.11	chr20	+	2646	12	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	123795	junction_11	807487.8629248608	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	30	1049	15.0	0	True	AATAAA	-13
PB.7138.12	chr20	+	2602	11	incomplete-splice_match	NOP56	ENST00000329276.9	2400	12	487	21	0	13	intron_retention	FALSE	canonical	1	1017501	junction_1	662044.5939414429	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	30	1490	65.0	0	True	NA	NA
PB.7138.13	chr20	+	2465	12	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	123795	junction_11	785128.5297485316	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	30	1466	20.0	0	True	AATAAA	-12
PB.3873.1	chr15	+	2932	1	antisense	novelGene_BCL2L10_AS_novelGene_GNB5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	252	False	NA	NA
PB.5494.15	chr18	+	3816	11	incomplete-splice_match	NEDD4L	ENST00000431212.6	3338	30	34	60002	1	484	intron_retention	FALSE	canonical	1	78929	junction_1	74424.14679154877	NA	2	1	TRUE	NA	NA	NA	C	coding	306	921	431	1351	75.0	-2	True	NA	NA
PB.5494.14	chr18	+	4364	29	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	-9	-502	combination_of_known_junctions	FALSE	canonical	1	78929	junction_1	80321.31665846075	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	474	2978	20.0	-45	False	ATTAAA	-17
PB.5494.13	chr18	+	3412	29	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	78929	junction_1	80321.31665846075	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	475	2979	30.0	-46	False	ATTAAA	-19
PB.5494.12	chr18	+	4124	29	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	-16	703	combination_of_known_junctions	FALSE	canonical	1	78929	junction_1	80321.31665846075	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	481	2985	20.0	0	True	ATTAAA	-30
PB.5494.11	chr18	+	4887	29	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	1	78929	junction_1	80321.31665846075	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	496	3000	95.0	-67	False	NA	NA
PB.5494.10	chr18	+	3290	29	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	78929	junction_1	80321.31665846075	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	474	2978	45.0	-45	False	AATAAA	-23
PB.120.5	chr1	+	4653	7	full-splice_match	NECAP2	ENST00000496239.5	4619	7	-34	0	0	0	multi-exon	FALSE	canonical	1	317549	junction_1	226370.91463231805	NA	3	NA	TRUE	NA	NA	NA	C	coding	172	519	39	557	40.0	-18	True	AATAAA	-17
PB.9146.10	chr5	+	2937	26	full-splice_match	MARCH6	ENST00000274140.9	9569	26	-51	6683	0	21	multi-exon	FALSE	canonical	1	374436	junction_1	189331.73630077342	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	184	2916	15.0	0	True	AATAAA	-21
PB.6155.16	chr19	-	2562	3	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	9	-11589	intron_retention	FALSE	canonical	1	26258	junction_2	162876.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	314	1882	100.0	0	True	NA	NA
PB.9976.15	chr6	+	6307	25	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	4255	-1	any annotated donor/acceptor	FALSE	canonical	1	27	junction_1	32530.521712842576	NA	4	NA	TRUE	NA	NA	NA	C	coding	1068	3207	274	3480	25.0	-8736	False	ATTAAA	-15
PB.6155.17	chr19	-	2476	2	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	-3	-11589	intron_retention	FALSE	canonical	1	23632	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	228	1796	100.0	-25	True	NA	NA
PB.12207.2	chrX	+	3583	13	full-splice_match	CXorf57	ENST00000372544.6	3607	13	24	0	-18	0	multi-exon	FALSE	canonical	1	10088	junction_8	16936.710625311975	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	128	2404	20.0	-27	True	ATTAAA	-14
PB.12207.3	chrX	+	3241	14	full-splice_match	CXorf57	ENST00000372548.8	3861	14	615	5	-70	0	multi-exon	FALSE	canonical	1	27879	junction_8	13472.1806592688	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	170	2062	20.0	518	False	ATTAAA	-14
PB.12207.1	chrX	+	2675	14	full-splice_match	CXorf57	ENST00000372548.8	3861	14	-28	1214	14	-1209	multi-exon	TRUE	canonical	1	27879	junction_8	13472.1806592688	NA	0	NA	TRUE	NA	NA	NA	C	coding	846	2538	138	2675	45.0	-37	True	AATAAA	-19
PB.12316.1	chrX	+	2009	6	full-splice_match	MAGEA2B	ENST00000447530.5	750	6	-26	-1233	1	0	multi-exon	FALSE	canonical	1	48	junction_3	444.5683749436075	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	510	1454	20.0	NA	False	AATAAA	-16
PB.4141.2	chr16	-	2890	10	novel_in_catalog	CIAO3	novel	2112	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	170369	junction_9	38234.27389717823	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	13	1053	55.0	-1	True	AATAAA	-13
PB.4141.1	chr16	-	2100	11	full-splice_match	CIAO3	ENST00000251588.6	2112	11	5	7	0	0	multi-exon	FALSE	canonical	1	170369	junction_10	37401.47082455448	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	13	1443	30.0	-1	True	AATAAA	-24
PB.12316.2	chrX	-	1711	3	full-splice_match	MAGEA2	ENST00000611674.4	1728	3	16	1	10	-1	multi-exon	FALSE	canonical	1	41	junction_2	406.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	213	1157	15.0	NA	False	AATAAA	-15
PB.12316.5	chrX	+	2189	5	novel_not_in_catalog	MAGEA2B	novel	1946	5	NA	NA	3	0	intron_retention	FALSE	canonical	1	12	junction_4	492.73947223659684	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	978	1634	20.0	NA	False	AATAAA	-16
PB.12316.4	chrX	-	1928	5	full-splice_match	MAGEA2	ENST00000620710.4	1947	5	17	2	11	-1	multi-exon	FALSE	canonical	1	63	junction_4	291.12969618367686	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	430	1374	15.0	NA	False	AATAAA	-15
PB.12316.7	chrX	-	2230	6	novel_in_catalog	MAGEA2	novel	1947	5	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	305.32841335191847	NA	2	NA	TRUE	NA	NA	NA	C	coding	314	945	731	1675	20.0	NA	False	AATAAA	-16
PB.12316.6	chrX	-	2038	6	novel_not_in_catalog	MAGEA2	novel	1947	5	NA	NA	14	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	321.1158046562019	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	541	1485	15.0	NA	False	AATAAA	-14
PB.12316.9	chrX	+	1753	3	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	1	19072	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	236	1180	15.0	NA	False	AATAAA	-14
PB.12316.8	chrX	-	3104	3	novel_in_catalog	MAGEA2	novel	1947	5	NA	NA	-1	4	intron_retention	FALSE	canonical	1	66	junction_2	394.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	1600	2544	20.0	NA	False	AATAAA	-21
PB.8904.5	chr4	-	3928	8	full-splice_match	UBE2D3	ENST00000321805.11	1087	8	4	-2845	2	0	multi-exon	FALSE	canonical	1	11862	junction_7	442980.3806030977	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	460	903	30.0	1	True	ATTAAA	-11
PB.11851.9	chr9	+	4603	19	novel_not_in_catalog	GPR107	novel	7353	20	NA	NA	-10	1890	any annotated donor/acceptor	FALSE	canonical	1	758	junction_10	122983.3125554484	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	23	1711	30.0	4	True	AATAAA	-22
PB.855.3	chr1	-	3171	7	full-splice_match	CD84	ENST00000368054.7	8181	7	-60	5070	-17	1921	multi-exon	FALSE	canonical	1	36641	junction_3	13776.22755268413	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	97	1083	55.0	6	False	NA	NA
PB.3767.1	chr15	+	2742	1	full-splice_match	AC023908.3	ENST00000564211.1	3047	1	302	3	302	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-5556	False	AATAAA	-16
PB.11994.1	chrX	+	4496	9	novel_in_catalog	PDHA1	novel	3277	10	NA	NA	13	9	intron_retention	FALSE	canonical	1	647730	junction_1	343884.0379675384	NA	15	NA	TRUE	NA	NA	NA	C	coding	181	546	3751	4296	35.0	-44	True	ATTAAA	-27
PB.11063.7	chr8	+	2398	11	novel_not_in_catalog	HMBOX1	novel	3184	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	9945	junction_10	43114.16446830438	NA	1	1	TRUE	NA	NA	NA	B	coding	383	1152	342	1493	95.0	0	True	NA	NA
PB.9915.1	chr6	-	2778	18	incomplete-splice_match	COL11A2	ENST00000341947.6	6425	66	22205	0	7630	0	5prime_fragment	FALSE	canonical	1	27083	junction_17	5372.365748627341	NA	1	NA	TRUE	NA	NA	NA	A	coding	291	876	917	1792	5.0	7311	False	NA	NA
PB.120.2	chr1	+	1879	7	novel_not_in_catalog	NECAP2	novel	2070	8	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_5	336115.3991741527	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	56	613	40.0	-35	True	AATAAA	-17
PB.4622.7	chr16	+	2505	11	novel_in_catalog	CDK10	novel	3344	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	108620	junction_1	140178.40707455625	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	198	569	20.0	-2	True	GATAAA	-16
PB.9355.19	chr5	+	4433	30	novel_in_catalog	CAST	novel	864	12	NA	NA	-25	0	intron_retention	FALSE	canonical	1	137170	junction_1	430063.0926011465	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	367	2370	25.0	-25	True	ATTAAA	-18
PB.9355.18	chr5	+	4498	31	full-splice_match	CAST	ENST00000508608.5	2425	31	-85	-1988	-32	1	multi-exon	FALSE	canonical	1	137170	junction_1	387569.27916401677	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	374	2434	20.0	-83	False	ATTAAA	-19
PB.8937.2	chr4	-	2399	3	full-splice_match	PITX2	ENST00000306732.8	2315	3	-80	-4	-53	4	multi-exon	FALSE	canonical	1	27042	junction_2	22704.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	324	975	719	1693	5.0	-70	False	AGTAAA	-21
PB.4622.6	chr16	+	2909	9	novel_in_catalog	CDK10	novel	3344	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	67658	junction_1	158456.43354069756	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	171	542	20.0	-10	True	GATAAA	-15
PB.11851.5	chr9	+	2026	19	full-splice_match	GPR107	ENST00000372410.7	6991	19	199	4766	-16	-720	multi-exon	FALSE	canonical	1	42578	junction_15	101719.69641030961	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	29	1744	5.0	-2	True	NA	NA
PB.9355.11	chr5	+	4504	30	full-splice_match	CAST	ENST00000395812.6	4506	30	-3	5	-3	-1	multi-exon	FALSE	canonical	1	146156	junction_1	429349.5505040209	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	190	2442	25.0	-50	True	ATTAAA	-17
PB.4622.1	chr16	+	2181	12	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	108620	junction_1	143946.65009591126	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	219	677	20.0	-23	True	GATAAA	-15
PB.9355.13	chr5	+	2782	31	novel_in_catalog	CAST	novel	864	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	35	2344	10.0	13	True	TTTAAA	-5
PB.9355.12	chr5	+	3113	31	novel_in_catalog	CAST	novel	864	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	186	2495	25.0	-46	True	AATAAA	-38
PB.9355.15	chr5	+	4205	31	novel_in_catalog	CAST	novel	864	12	NA	NA	5	-349	intron_retention	FALSE	canonical	1	146156	junction_1	386781.0376986442	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	182	2491	50.0	-42	True	AGTAAA	-13
PB.9355.14	chr5	+	2640	30	novel_in_catalog	CAST	novel	864	12	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	1	146156	junction_1	455492.29953873466	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	185	2434	35.0	-45	True	AAGAAA	-26
PB.9355.17	chr5	+	3041	30	full-splice_match	CAST	ENST00000395812.6	4506	30	15	1450	15	0	multi-exon	FALSE	canonical	1	146156	junction_1	429349.5505040209	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	172	2424	30.0	-32	True	AATAAA	-37
PB.7127.19	chr20	-	2605	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	51	10256	-3	-6	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	6	NA	TRUE	NA	NA	NA	C	coding	391	1176	223	1398	25.0	5	True	NA	NA
PB.5683.11	chr19	-	3031	8	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	27680	junction_6	86059.07938487042	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	502	2352	20.0	3	True	NA	NA
PB.5683.10	chr19	-	3225	10	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	3	2	no_combination_of_known_junctions	FALSE	canonical	1	11727	junction_5	95718.86241656337	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	897	2546	20.0	5	True	NA	NA
PB.5683.13	chr19	-	3349	11	novel_not_in_catalog	ZNF266	novel	3509	11	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	2603	junction_6	84298.03004157332	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	821	2671	15.0	1	True	NA	NA
PB.5683.15	chr19	-	3710	8	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	25044	junction_5	78406.88852468545	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	1385	3034	20.0	-32	False	NA	NA
PB.4622.3	chr16	+	3061	8	novel_in_catalog	CDK10	novel	3344	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	67658	junction_1	167723.04764676312	NA	9	1	TRUE	NA	NA	NA	C	coding	123	372	181	552	20.0	-20	True	GATAAA	-15
PB.5683.17	chr19	-	3331	11	novel_not_in_catalog	ZNF266	novel	3509	11	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	6745	junction_7	85267.68371639986	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	807	2657	30.0	5	True	NA	NA
PB.5683.16	chr19	-	3670	12	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	29881	junction_5	84784.85278457751	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	1345	2994	20.0	-1	True	NA	NA
PB.6224.1	chr19	+	1813	5	full-splice_match	CCDC106	ENST00000586790.5	2162	5	343	6	253	-6	multi-exon	FALSE	canonical	1	269806	junction_3	32406.849232646793	NA	1	NA	TRUE	NA	NA	NA	A	coding	280	843	562	1404	30.0	-6553	False	ATTAAA	-20
PB.5683.18	chr19	-	3453	12	novel_not_in_catalog	ZNF266	novel	3509	11	NA	NA	10	-1	any annotated donor/acceptor	FALSE	canonical	1	6745	junction_8	92671.7886000404	NA	3	2	TRUE	NA	NA	NA	C	coding	549	1650	1131	2780	30.0	12	True	NA	NA
PB.4622.2	chr16	+	2561	11	full-splice_match	CDK10	ENST00000472018.5	2532	11	-30	1	0	0	multi-exon	FALSE	canonical	1	96295	junction_1	143068.4844199099	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	42	626	20.0	-21	True	GATAAA	-15
PB.15.6	chr1	-	2245	18	novel_in_catalog	INTS11	novel	2369	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2967	junction_16	292262.6871193709	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	52	1995	45.0	0	True	AGTAAA	-6
PB.7386.3	chr20	+	2051	16	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	-4	-24	combination_of_known_junctions	FALSE	canonical	1	30556	junction_15	373308.88643517	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	36	1589	10.0	-17	True	AGTAAA	-10
PB.7386.2	chr20	+	2517	15	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	30556	junction_14	333348.38097114966	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	46	1719	25.0	-27	True	AGTAAA	-32
PB.7386.1	chr20	+	2619	14	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	483042	junction_1	252391.93010699865	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	47	1720	25.0	-28	True	AGTAAA	-32
PB.7386.7	chr20	+	3284	13	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	6	-20	intron_retention	FALSE	canonical	1	95613	junction_11	335155.28919329774	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	26	811	15.0	-7	True	AGTAAA	-14
PB.7386.6	chr20	+	2107	14	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	4	-19	intron_retention	FALSE	canonical	1	4359	junction_6	340754.14823680685	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	791	1669	15.0	-9	True	AGTAAA	-15
PB.7386.5	chr20	+	2136	16	full-splice_match	NELFCD	ENST00000460601.5	2137	16	-19	20	4	-20	multi-exon	FALSE	canonical	1	30556	junction_15	323626.48074857326	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	1	1800	15.0	-9	True	AGTAAA	-14
PB.7386.4	chr20	+	4190	11	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	-1	-21	intron_retention	FALSE	canonical	1	483042	junction_1	254765.89827292427	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	2531	3310	10.0	-14	True	AGTAAA	-13
PB.649.5	chr1	+	3210	27	full-splice_match	WDR3	ENST00000349139.5	9974	27	-20	6784	-20	-6784	multi-exon	FALSE	canonical	1	111996	junction_1	79837.55162502975	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	68	2899	15.0	-6	True	AATAAA	-18
PB.3987.1	chr15	+	2025	4	full-splice_match	PPCDC	ENST00000568207.5	1127	4	-19	-879	12	879	multi-exon	FALSE	canonical	1	47410	junction_1	52196.675551865046	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	133	699	75.0	12	True	NA	NA
PB.3987.2	chr15	+	1210	6	full-splice_match	PPCDC	ENST00000342932.7	2250	6	54	986	4	2	multi-exon	FALSE	canonical	1	47410	junction_1	66282.67240961245	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	91	705	20.0	19	True	AATAAA	-15
PB.7386.8	chr20	+	2164	15	novel_not_in_catalog	NELFCD	novel	2305	15	NA	NA	7	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	338778.6983760225	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	25	1662	25.0	-6	True	AGTAAA	-32
PB.649.1	chr1	+	3876	27	full-splice_match	WDR3	ENST00000349139.5	9974	27	-24	6122	20	-6122	multi-exon	FALSE	canonical	1	111996	junction_1	79837.55162502975	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	72	2903	40.0	-10	True	NA	NA
PB.10589.3	chr7	-	1856	9	novel_in_catalog	STAG3L3	novel	1033	8	NA	NA	1	-401	combination_of_known_junctions	FALSE	canonical	1	821	junction_6	68469.80771478769	NA	2	NA	TRUE	NA	NA	NA	C	coding	134	405	382	786	20.0	NA	False	AGTAAA	-24
PB.649.3	chr1	+	4345	27	full-splice_match	WDR3	ENST00000349139.5	9974	27	-26	5655	18	-5655	multi-exon	FALSE	canonical	1	111996	junction_1	79837.55162502975	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	74	2905	25.0	-12	True	NA	NA
PB.649.2	chr1	+	3516	27	full-splice_match	WDR3	ENST00000349139.5	9974	27	-29	6487	15	-6487	multi-exon	TRUE	canonical	1	111996	junction_1	79837.55162502975	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	77	2908	55.0	-15	True	AATAAA	-17
PB.12144.1	chrX	-	3548	6	novel_in_catalog	FTX	novel	1077	6	NA	NA	1	2777	combination_of_known_junctions	FALSE	canonical	1	4280	junction_2	61864.903163587034	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-44	True	AATAAA	-19
PB.7005.2	chr2	+	4240	7	novel_in_catalog	PNKD	novel	3021	10	NA	NA	79	-5	intron_retention	FALSE	canonical	1	104237	junction_1	65208.80385261555	NA	6	NA	TRUE	NA	NA	NA	C	coding	115	348	2088	2435	40.0	4	True	NA	NA
PB.7005.1	chr2	+	3672	8	novel_in_catalog	PNKD	novel	3021	10	NA	NA	64	-2	intron_retention	FALSE	canonical	1	104237	junction_1	63334.00247988792	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	1517	1864	40.0	-8809	False	NA	NA
PB.7005.4	chr2	+	3047	9	novel_not_in_catalog	PNKD	novel	3021	10	NA	NA	-3983	-6	any annotated donor/acceptor	FALSE	canonical	1	442	junction_1	86750.37514616291	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	896	1243	40.0	-1326	False	NA	NA
PB.10589.5	chr7	-	1717	6	full-splice_match	STAG3L3	ENST00000448173.5	1716	6	-23	22	-16	-13	multi-exon	FALSE	canonical	1	821	junction_3	82572.73650158387	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	406	756	100.0	NA	False	NA	NA
PB.7118.2	chr2	+	2142	7	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	5329	junction_6	89554.07561806194	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	184	1296	5.0	-7816	False	AGTAAA	-23
PB.7118.3	chr2	+	3237	9	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	4	-2	intron_retention	FALSE	canonical	1	14014	junction_7	88361.06534130289	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	1967	2392	5.0	-7815	False	AGTAAA	-22
PB.7118.4	chr2	+	2661	11	novel_in_catalog	D2HGDH	novel	2617	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	22091	junction_7	81313.30863917666	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	178	1821	10.0	-7810	False	AGTAAA	-17
PB.6637.7	chr2	+	2183	7	full-splice_match	ARID5A	ENST00000357485.7	2188	7	3	2	0	2	multi-exon	FALSE	canonical	1	180394	junction_2	119808.12619072771	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	76	1860	10.0	0	True	AATAAA	-23
PB.7043.6	chr2	-	2129	9	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	-1	19	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	679969.6205950583	NA	2	1	TRUE	NA	NA	NA	C	coding	397	1194	203	1396	65.0	-6	True	AATAAA	-43
PB.10589.4	chr7	-	2171	5	novel_in_catalog	STAG3L3	novel	1033	8	NA	NA	21	-13	intron_retention	FALSE	canonical	1	821	junction_2	89313.44867095884	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9079.14	chr4	-	2949	4	novel_in_catalog	DCTD	novel	1829	5	NA	NA	0	-547	intron_retention	FALSE	canonical	1	114241	junction_3	430469.15527621977	NA	2	1	TRUE	NA	NA	NA	C	coding	138	417	76	492	90.0	0	True	AAGAAA	-28
PB.9079.12	chr4	-	2548	7	novel_in_catalog	DCTD	novel	1829	5	NA	NA	-32	-7	combination_of_known_junctions	FALSE	canonical	1	13201	junction_5	434780.76070768764	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	875	1411	30.0	325	False	ATTAAA	-20
PB.9079.13	chr4	-	774	6	full-splice_match	DCTD	ENST00000357067.7	1931	6	10	1147	0	121	multi-exon	FALSE	canonical	1	250137	junction_5	291217.3845106092	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	90	626	15.0	9	True	TATAAA	-17
PB.2936.6	chr12	+	2262	13	novel_in_catalog	RFC5	novel	572	6	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	1	5139	junction_2	158034.80166107573	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	189	1307	50.0	19	True	AATAAA	-23
PB.12184.7	chrX	-	2183	15	incomplete-splice_match	BTK	ENST00000308731.7	2579	19	1	6148	1	-13	3prime_fragment	FALSE	canonical	1	232462	junction_10	68698.21757899264	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	164	1741	70.0	-4	True	NA	NA
PB.12184.4	chrX	-	2640	20	novel_not_in_catalog	BTK	novel	2417	19	NA	NA	4	-4	intron_retention	FALSE	canonical	1	201	junction_4	121849.1333443764	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	161	2209	25.0	-1	True	AATAAA	-16
PB.12184.5	chrX	-	2596	18	novel_in_catalog	BTK	novel	2417	19	NA	NA	-57	-4	intron_retention	FALSE	canonical	1	1738	junction_3	103865.25772145012	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	251	1831	25.0	-91	False	AATAAA	-16
PB.12184.2	chrX	-	2573	19	full-splice_match	BTK	ENST00000308731.7	2579	19	3	3	3	-3	multi-exon	FALSE	canonical	1	232462	junction_14	65075.00316984668	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	162	2141	25.0	-2	True	AATAAA	-17
PB.12184.3	chrX	-	3216	18	novel_in_catalog	BTK	novel	2417	19	NA	NA	0	-4	intron_retention	FALSE	canonical	1	232462	junction_13	66961.2233016644	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	165	1799	25.0	-5	True	AATAAA	-16
PB.12184.1	chrX	-	4568	17	novel_in_catalog	BTK	novel	2417	19	NA	NA	6	-3	intron_retention	FALSE	canonical	1	232462	junction_12	68820.51799415909	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	159	1736	25.0	1	True	AATAAA	-17
PB.9404.4	chr5	+	1365	7	full-splice_match	COMMD10	ENST00000632434.1	1433	7	1	67	1	-67	multi-exon	FALSE	canonical	1	256019	junction_5	60028.35133894835	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	27	635	25.0	2	True	AATAAA	-42
PB.10314.6	chr6	+	2890	3	incomplete-splice_match	ACAT2	ENST00000367048.4	3180	9	2154	8409	-13	-4661	internal_fragment	FALSE	canonical	1	1128730	junction_1	56739.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	650	979	90.0	3	True	NA	NA
PB.8399.1	chr3	-	2817	1	antisense	novelGene_ATP2C1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10314.1	chr6	+	1368	9	full-splice_match	ACAT2	ENST00000367048.4	3180	9	1659	153	-508	-144	multi-exon	FALSE	canonical	1	1053057	junction_1	132094.51861823932	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	102	1295	45.0	-928	False	AATAAA	-28
PB.6637.6	chr2	+	2351	7	novel_not_in_catalog	ARID5A	novel	876	4	NA	NA	-1	6	any annotated donor/acceptor	FALSE	canonical	1	19113	junction_4	153045.9314767411	NA	1	NA	TRUE	NA	NA	NA	C	coding	647	1944	77	2020	10.0	-1	True	AATAAA	-31
PB.1233.9	chr1	+	3150	15	novel_in_catalog	EXO1	novel	583	3	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	78442	junction_2	45481.07934350283	NA	0	NA	TRUE	NA	NA	NA	B	coding	846	2541	465	3005	15.0	0	True	AATACA	-18
PB.2516.5	chr12	+	1950	7	full-splice_match	FGFR1OP2	ENST00000229395.7	2924	7	82	892	-16	581	multi-exon	FALSE	canonical	1	120425	junction_5	131012.53764864984	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	261	1022	80.0	-5	True	NA	NA
PB.10314.3	chr6	+	1906	9	full-splice_match	ACAT2	ENST00000367048.4	3180	9	1701	-427	-466	427	multi-exon	FALSE	canonical	1	1053057	junction_1	132094.51861823932	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	60	1253	35.0	-37	True	NA	NA
PB.2516.7	chr12	+	2883	7	novel_not_in_catalog	FGFR1OP2	novel	2924	7	NA	NA	-9	-10	any annotated donor/acceptor	FALSE	canonical	1	497	junction_2	197278.24871626258	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	329	976	35.0	2	True	ATTAAA	-12
PB.2516.6	chr12	+	1833	6	full-splice_match	FGFR1OP2	ENST00000327214.5	2790	6	-32	989	-13	581	multi-exon	FALSE	canonical	1	246722	junction_5	110471.88374351186	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	258	905	80.0	-2	True	NA	NA
PB.7057.19	chr2	+	1775	20	novel_in_catalog	SP100	novel	3882	25	NA	NA	-13	-3675	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	233453.92482341576	NA	8	3	TRUE	NA	NA	NA	C	coding	562	1686	90	1775	70.0	-12	True	AAGAAA	-20
PB.8385.5	chr3	-	1235	11	full-splice_match	ISY1	ENST00000393292.7	988	11	-60	-187	-49	-39	multi-exon	FALSE	canonical	1	25364	junction_3	178004.67294902683	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	123	881	10.0	4	True	NA	NA
PB.2981.4	chr12	-	1990	13	full-splice_match	VPS33A	ENST00000267199.8	4586	13	41	2555	-41	20	multi-exon	FALSE	canonical	1	160438	junction_12	43037.21479913247	NA	2	NA	TRUE	NA	NA	NA	C	coding	596	1791	73	1863	35.0	3	True	AATATA	-19
PB.2981.1	chr12	-	4548	13	full-splice_match	VPS33A	ENST00000267199.8	4586	13	40	-2	40	2	multi-exon	FALSE	canonical	1	160438	junction_12	43037.21479913247	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	74	1864	15.0	2	True	AATAAA	-19
PB.2981.3	chr12	-	2259	11	novel_in_catalog	AC048338.1	novel	2748	16	NA	NA	-77	-23770	no_combination_of_known_junctions	FALSE	canonical	1	11392	junction_5	88115.00773812598	NA	0	NA	TRUE	NA	NA	NA	A	coding	489	1470	93	1562	20.0	-17	True	AATAAA	-20
PB.2981.2	chr12	-	2521	13	full-splice_match	VPS33A	ENST00000267199.8	4586	13	80	1985	-2	14	multi-exon	FALSE	canonical	1	160438	junction_12	43037.21479913247	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	34	1824	20.0	-9	True	AATAAA	-20
PB.12357.3	chrX	-	2286	13	full-splice_match	G6PD	ENST00000393564.6	1661	13	-16	-609	-16	0	multi-exon	FALSE	canonical	1	62674	junction_12	515730.7631343768	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	130	1677	5.0	-26	True	ATTAAA	-14
PB.4703.24	chr17	+	4648	14	incomplete-splice_match	RABEP1	ENST00000537505.5	5365	18	55717	4	5962	-4	5prime_fragment	FALSE	canonical	1	362287	junction_11	47968.160354292806	NA	5	NA	TRUE	NA	NA	NA	C	coding	674	2025	39	2063	10.0	NA	False	ATTAAA	-16
PB.9434.11	chr5	-	2813	9	incomplete-splice_match	FNIP1	ENST00000307968.11	6388	17	-77	60647	-18	-24764	3prime_fragment	FALSE	canonical	1	90497	junction_3	27658.8250244723	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	78	1166	75.0	18	True	TTTAAA	-41
PB.7011.4	chr2	+	2585	7	novel_in_catalog	BCS1L	novel	804	3	NA	NA	-16	0	intron_retention	FALSE	canonical	1	59588	junction_2	135288.717974642	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	1772	2530	10.0	-21	True	NA	NA
PB.7011.5	chr2	+	2317	8	novel_in_catalog	BCS1L	novel	804	3	NA	NA	-14	0	intron_retention	FALSE	canonical	1	35721	junction_1	133120.74298905933	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	1001	2260	5.0	-19	True	NA	NA
PB.7011.6	chr2	+	1411	8	full-splice_match	BCS1L	ENST00000359273.7	1454	8	42	1	-11	0	multi-exon	FALSE	canonical	1	46974	junction_1	129583.74412758125	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	96	1355	10.0	-16	True	NA	NA
PB.2516.2	chr12	+	895	5	full-splice_match	FGFR1OP2	ENST00000546072.5	956	5	-44	105	-28	-105	multi-exon	FALSE	canonical	1	254465	junction_1	104187.99691663143	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	273	791	35.0	-213	False	AATAAA	-9
PB.5593.4	chr19	+	2007	2	full-splice_match	GADD45B	ENST00000592937.1	2007	2	0	0	0	0	multi-exon	FALSE	canonical	1	996342	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-16
PB.7011.1	chr2	+	2965	5	novel_in_catalog	BCS1L	novel	804	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	59588	junction_1	164154.72833123023	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	2358	2909	10.0	-94	False	NA	NA
PB.7011.2	chr2	+	2303	8	novel_in_catalog	BCS1L	novel	804	3	NA	NA	24	0	intron_retention	FALSE	canonical	1	35721	junction_1	163719.64809118677	NA	3	NA	TRUE	NA	NA	NA	C	coding	252	759	1489	2247	10.0	-31	True	NA	NA
PB.7011.3	chr2	+	2210	8	novel_in_catalog	BCS1L	novel	804	3	NA	NA	-17	0	intron_retention	FALSE	canonical	1	8560	junction_7	170910.23130692836	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	1004	2023	10.0	-22	True	NA	NA
PB.6516.1	chr2	-	2537	8	full-splice_match	WDR92	ENST00000295121.10	2626	8	28	61	14	-61	multi-exon	FALSE	canonical	1	96349	junction_2	31008.897153782775	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	90	1163	25.0	-6	True	AATAAA	-18
PB.6516.3	chr2	-	1474	8	full-splice_match	WDR92	ENST00000295121.10	2626	8	19	1133	5	824	multi-exon	FALSE	canonical	1	96349	junction_2	31008.897153782775	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	99	1172	100.0	-15	True	NA	NA
PB.6516.2	chr2	-	1771	8	full-splice_match	WDR92	ENST00000295121.10	2626	8	22	833	8	-833	multi-exon	FALSE	canonical	1	96349	junction_2	31008.897153782775	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	96	1169	10.0	-12	True	ATTAAA	-14
PB.6516.4	chr2	-	1918	7	novel_not_in_catalog	WDR92	novel	1280	10	NA	NA	20	-890	any annotated donor/acceptor	FALSE	canonical	1	2534	junction_1	60039.45120687082	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	84	905	20.0	0	True	AATAAA	-19
PB.7087.2	chr2	+	1815	8	full-splice_match	COPS8	ENST00000354371.6	4007	8	575	1617	1	231	multi-exon	FALSE	canonical	1	141991	junction_3	124694.74912156405	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	79	708	20.0	-27	True	NA	NA
PB.2119.2	chr11	+	3013	19	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	-25	3	intron_retention	FALSE	canonical	1	43060	junction_6	304017.87640060874	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	1336	2934	5.0	11	True	AATAAA	-21
PB.2119.3	chr11	+	3405	18	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	316131	junction_1	259989.06912351018	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	1118	2497	10.0	-4784	False	AATAAA	-17
PB.6407.4	chr2	-	2563	7	novel_in_catalog	FAM98A	novel	2816	8	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	4771	junction_4	182185.93303972608	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	475	1446	10.0	-5	True	AATAAA	-19
PB.2119.1	chr11	+	3113	18	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-25	-1	intron_retention	TRUE	canonical	1	316131	junction_1	250508.33717837703	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	1194	3038	10.0	11	True	AATAAA	-17
PB.2119.6	chr11	+	3166	19	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	40130	junction_14	302455.15669200174	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	1104	2483	10.0	-37	True	AATAAA	-17
PB.2119.7	chr11	+	3171	17	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	316131	junction_1	245285.01669894147	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	2092	3096	10.0	-35	True	AATAAA	-17
PB.2119.4	chr11	+	3046	19	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	58871	junction_6	302072.2320991882	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	1373	2971	10.0	-44	True	AATAAA	-17
PB.2119.5	chr11	+	3106	18	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-10	3	intron_retention	FALSE	canonical	1	316131	junction_1	251909.9519520506	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	2023	3027	5.0	-39	True	AATAAA	-21
PB.6354.1	chr2	-	4131	7	full-splice_match	DNAJC27	ENST00000264711.6	4992	7	121	740	89	-740	multi-exon	FALSE	canonical	1	17478	junction_2	9068.986665492946	NA	2	NA	TRUE	NA	NA	NA	A	coding	273	822	70	891	95.0	-19	True	NA	NA
PB.2119.8	chr11	+	3320	20	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	40130	junction_15	348328.98673321353	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	1258	2637	10.0	-20	True	AATAAA	-17
PB.2119.9	chr11	+	3250	19	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	56656	junction_1	316978.2869986066	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	1331	3175	10.0	-20	True	AATAAA	-17
PB.7057.7	chr2	+	2942	29	full-splice_match	SP100	ENST00000340126.8	2926	29	-77	61	-32	0	multi-exon	FALSE	canonical	1	98698	junction_15	276768.5555113155	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	109	2766	50.0	-56	False	TTTAAA	-45
PB.11760.11	chr9	+	5908	33	novel_in_catalog	CNTRL	novel	7660	44	NA	NA	-7	0	intron_retention	FALSE	canonical	1	40485	junction_1	49771.6864530612	NA	0	NA	TRUE	NA	NA	NA	C	coding	1773	5322	165	5486	15.0	24	True	AATAAA	-12
PB.6407.9	chr2	-	3718	1	novel_in_catalog	FAM98A	novel	2816	8	NA	NA	261	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	220	663	1943	2605	5.0	8246	False	AATAAA	-15
PB.11760.10	chr9	+	3089	18	full-splice_match	CNTRL	ENST00000373847.5	3372	18	-31	314	-31	-314	multi-exon	FALSE	canonical	1	40485	junction_1	32768.94850829212	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2901	189	3089	65.0	0	True	AAGAAA	-6
PB.7736.9	chr22	+	2065	11	incomplete-splice_match	MCM5	ENST00000382011.9	2402	16	10240	1	18	-1	5prime_fragment	FALSE	canonical	1	741561	junction_1	219218.7621764159	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	264	1820	10.0	0	True	AATAAA	-18
PB.7736.6	chr22	+	3299	17	full-splice_match	MCM5	ENST00000216122.8	3534	17	79	156	0	-156	multi-exon	FALSE	canonical	1	741561	junction_7	188933.86621719608	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	76	2280	60.0	0	True	NA	NA
PB.7736.7	chr22	+	2287	15	incomplete-splice_match	MCM5	ENST00000216122.8	3534	17	3141	929	2773	0	5prime_fragment	FALSE	canonical	1	741561	junction_5	196059.00942006084	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	56	2041	10.0	-8200	False	AATAAA	-19
PB.7736.4	chr22	+	5098	15	incomplete-splice_match	MCM5	ENST00000216122.8	3534	17	71	930	0	-1	intron_retention	FALSE	canonical	1	741561	junction_7	182360.20671529436	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	84	2189	10.0	-8	True	AATAAA	-18
PB.7736.5	chr22	+	2528	17	full-splice_match	MCM5	ENST00000216122.8	3534	17	77	929	-2	0	multi-exon	FALSE	canonical	1	741561	junction_7	188933.86621719608	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	78	2282	10.0	-2	True	AATAAA	-19
PB.7736.2	chr22	+	2559	17	novel_not_in_catalog	MCM5	novel	3534	17	NA	NA	-11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	311132.84578051924	NA	15	2	TRUE	NA	NA	NA	C	coding	676	2031	95	2125	10.0	-19	True	AATAAA	-19
PB.7736.3	chr22	+	4288	16	novel_in_catalog	MCM5	novel	3534	17	NA	NA	-1	0	intron_retention	FALSE	canonical	1	741561	junction_7	195015.23456723976	NA	2	NA	TRUE	NA	NA	NA	C	coding	701	2106	85	2190	10.0	-9	True	AATAAA	-19
PB.7736.1	chr22	+	3365	16	incomplete-splice_match	MCM5	ENST00000216122.8	3534	17	52	929	-19	0	intron_retention	FALSE	canonical	1	741561	junction_7	176180.152529115	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	103	2319	10.0	-27	False	AATAAA	-19
PB.1897.8	chr11	+	3918	7	novel_not_in_catalog	LDLRAD3	novel	1879	5	NA	NA	3	-2	any annotated donor/acceptor	FALSE	canonical	1	2308	junction_1	64720.79112275711	NA	1	1	TRUE	NA	NA	NA	C	coding	310	933	249	1181	15.0	3	True	AATAAA	-16
PB.1897.9	chr11	+	3934	8	novel_not_in_catalog	LDLRAD3	novel	1879	5	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	249	junction_1	69020.10353690364	NA	11	3	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	15.0	4	True	AATAAA	-18
PB.962.1	chr1	+	3476	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	-4	3363	-4	-3360	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	148	1800	45.0	-4	True	ATTAAA	-22
PB.962.7	chr1	+	2775	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	34	4026	34	-4023	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	110	1762	15.0	34	True	ATTAAA	-20
PB.962.6	chr1	+	2900	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	-5	3940	-5	-3937	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	149	1801	40.0	-5	True	AATAAA	-24
PB.962.5	chr1	+	3472	15	full-splice_match	SOAT1	ENST00000540564.5	6861	15	29	3360	29	-3360	multi-exon	FALSE	canonical	1	6949	junction_2	113914.33089181804	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	318	1796	45.0	1	True	ATTAAA	-22
PB.8061.7	chr3	-	3135	4	novel_not_in_catalog	KIAA1143	novel	507	4	NA	NA	6	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	30531.761080335124	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	55	519	40.0	5	True	NA	NA
PB.1897.1	chr11	+	3955	6	full-splice_match	LDLRAD3	ENST00000315571.5	3798	6	-45	-112	-45	112	multi-exon	FALSE	canonical	1	71894	junction_1	31510.502981704372	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	67	1104	50.0	-45	True	AATAAA	-6
PB.1897.2	chr11	+	3691	5	full-splice_match	LDLRAD3	ENST00000528989.5	1879	5	59	-1871	-38	2	multi-exon	FALSE	canonical	1	6176	junction_1	61250.33641285164	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	60	950	15.0	-38	True	AATAAA	-20
PB.1897.3	chr11	+	3485	5	novel_in_catalog	LDLRAD3	novel	1879	5	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	7203	junction_4	53467.49792397246	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	55	564	15.0	-33	True	AATAAA	-18
PB.1897.4	chr11	+	4194	5	novel_not_in_catalog	LDLRAD3	novel	1879	5	NA	NA	-32	-39756	any annotated donor/acceptor	FALSE	canonical	1	576	junction_4	55874.888444519514	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	54	617	10.0	-32	True	AATAAA	-14
PB.1897.5	chr11	+	2979	6	full-splice_match	LDLRAD3	ENST00000315571.5	3798	6	-26	845	-26	-845	multi-exon	FALSE	canonical	1	71894	junction_1	31510.502981704372	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	48	1085	85.0	-26	True	NA	NA
PB.1897.6	chr11	+	3078	7	novel_not_in_catalog	LDLRAD3	novel	1879	5	NA	NA	0	-845	any annotated donor/acceptor	FALSE	canonical	1	2308	junction_1	64720.79112275711	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	252	1184	85.0	0	True	NA	NA
PB.1897.7	chr11	+	3794	6	full-splice_match	LDLRAD3	ENST00000315571.5	3798	6	4	0	4	0	multi-exon	FALSE	canonical	1	71894	junction_1	31510.502981704372	NA	11	NA	TRUE	NA	NA	NA	C	coding	345	1038	18	1055	15.0	4	True	AATAAA	-18
PB.8159.4	chr3	+	2174	11	full-splice_match	ALAS1	ENST00000469224.5	2125	11	74	-123	16	11	multi-exon	FALSE	canonical	1	471626	junction_1	113398.19781354551	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	129	2051	45.0	0	True	ATTAAA	-31
PB.8159.5	chr3	+	2351	12	full-splice_match	ALAS1	ENST00000484952.5	2356	12	16	-11	16	11	multi-exon	FALSE	canonical	1	96773	junction_1	242291.3983744872	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	306	2228	45.0	0	True	ATTAAA	-31
PB.2637.38	chr12	+	1497	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10364	12095	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	1004077.6448941696	NA	4	2	TRUE	NA	NA	NA	B	coding	322	969	348	1316	20.0	3	True	ATTAAA	-25
PB.8159.1	chr3	+	2052	10	novel_not_in_catalog	ALAS1	novel	2125	11	NA	NA	-11	11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	237691.86581734006	NA	2	1	TRUE	NA	NA	NA	C	coding	407	1224	168	1391	45.0	0	True	ATTAAA	-31
PB.8159.2	chr3	+	2375	12	full-splice_match	ALAS1	ENST00000394965.6	2430	12	31	24	-7	11	multi-exon	FALSE	canonical	1	12701	junction_2	261469.39469239977	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	279	2252	45.0	4	True	ATTAAA	-31
PB.8159.3	chr3	+	3142	10	novel_in_catalog	ALAS1	novel	2125	11	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	502144	junction_1	97239.55180105026	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	1113	3035	50.0	9	True	ATTAAA	-15
PB.10578.9	chr7	+	1928	8	novel_not_in_catalog	TMEM248	novel	4229	7	NA	NA	-1	2	any annotated donor/acceptor	FALSE	canonical	1	1916	junction_1	399815.08816267876	NA	1	1	TRUE	NA	NA	NA	C	coding	314	945	351	1295	25.0	6	True	AATAAA	-23
PB.11686.1	chr9	-	4843	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	0	11	0	-11	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	3	NA	TRUE	NA	NA	NA	C	coding	406	1221	201	1421	80.0	-41	False	NA	NA
PB.6831.11	chr2	-	2670	4	incomplete-splice_match	METTL8	ENST00000392599.6	828	5	-52	6695	16	152	3prime_fragment	FALSE	canonical	1	28219	junction_3	57178.07616560739	NA	3	NA	TRUE	NA	NA	NA	C	coding	212	639	201	839	45.0	701	False	NA	NA
PB.6831.10	chr2	-	1843	10	full-splice_match	METTL8	ENST00000375258.8	8203	10	-24	6384	-1	-5	multi-exon	FALSE	canonical	1	28219	junction_9	43380.12212984191	NA	2	NA	TRUE	NA	NA	NA	C	coding	407	1224	241	1464	30.0	661	False	AGTAAA	-42
PB.9406.7	chr5	-	4180	18	novel_in_catalog	SEMA6A	novel	6878	19	NA	NA	9	-6	combination_of_known_junctions	FALSE	canonical	1	2318	junction_1	57352.56426711748	NA	1	NA	TRUE	NA	NA	NA	C	coding	975	2928	780	3707	70.0	100	False	AATACA	-7
PB.9406.4	chr5	-	4325	20	novel_not_in_catalog	SEMA6A	novel	6878	19	NA	NA	111	10	any annotated donor/acceptor	FALSE	canonical	1	1324	junction_3	64502.19707151557	NA	3	NA	TRUE	NA	NA	NA	C	coding	1052	3159	678	3836	85.0	-1	True	AATACA	-23
PB.9406.5	chr5	-	4284	19	full-splice_match	SEMA6A	ENST00000343348.10	6878	19	70	2524	70	-6	multi-exon	FALSE	canonical	1	27865	junction_2	52013.46724065856	NA	2	NA	TRUE	NA	NA	NA	C	coding	1030	3093	719	3811	70.0	4	True	AATACA	-7
PB.9406.2	chr5	-	4640	19	full-splice_match	SEMA6A	ENST00000343348.10	6878	19	111	2127	111	7	multi-exon	FALSE	canonical	1	27865	junction_2	52013.46724065856	NA	2	NA	TRUE	NA	NA	NA	C	coding	1030	3093	678	3770	20.0	-1	True	AATAAA	-22
PB.9406.3	chr5	-	4695	20	novel_not_in_catalog	SEMA6A	novel	6878	19	NA	NA	111	-4	any annotated donor/acceptor	FALSE	canonical	1	1324	junction_3	64502.19707151557	NA	4	NA	TRUE	NA	NA	NA	C	coding	1052	3159	678	3836	40.0	-1	True	AATAAA	-11
PB.9406.1	chr5	-	6733	19	full-splice_match	SEMA6A	ENST00000343348.10	6878	19	109	36	109	-36	multi-exon	FALSE	canonical	1	27865	junction_2	52013.46724065856	NA	2	NA	TRUE	NA	NA	NA	C	coding	1030	3093	680	3772	80.0	-3	True	NA	NA
PB.3589.2	chr14	-	2424	19	novel_in_catalog	VIPAS39	novel	2761	21	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	4806	junction_12	65526.68150722089	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	93	1481	0.0	-4	True	AATAAA	-26
PB.3589.3	chr14	-	2517	20	full-splice_match	VIPAS39	ENST00000557658.5	2562	20	52	-7	-2	0	multi-exon	FALSE	canonical	1	132308	junction_19	42044.346021842604	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	95	1576	0.0	-6	True	AATAAA	-24
PB.6564.1	chr2	+	1150	10	full-splice_match	WDR54	ENST00000348227.4	1147	10	-2	-1	-1	1	multi-exon	FALSE	canonical	1	314965	junction_1	87302.79213047987	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	91	1095	15.0	-2	True	CATAAA	-18
PB.536.2	chr1	-	1914	19	full-splice_match	GLMN	ENST00000370360.7	1995	19	-33	114	-22	-24	multi-exon	FALSE	canonical	1	103458	junction_16	28880.905966476264	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	116	1900	75.0	-1	True	GATAAA	-19
PB.3589.4	chr14	-	2798	21	full-splice_match	VIPAS39	ENST00000343765.6	2761	21	-43	6	1	1	multi-exon	FALSE	canonical	1	15881	junction_20	71423.12425440377	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	382	1863	0.0	-22	True	AATAAA	-18
PB.9406.9	chr5	-	4288	20	novel_not_in_catalog	SEMA6A	novel	6878	19	NA	NA	109	-6	any annotated donor/acceptor	FALSE	canonical	1	73	junction_13	71727.92165029925	NA	3	NA	TRUE	NA	NA	NA	C	coding	882	2649	1167	3815	70.0	-3	True	AATACA	-7
PB.9059.2	chr4	-	6912	39	novel_not_in_catalog	DDX60L	novel	3509	9	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	885	junction_38	42988.74458574211	NA	1	NA	TRUE	NA	NA	NA	C	coding	1706	5121	381	5501	15.0	-6	True	AATAAA	-14
PB.9059.3	chr4	-	6886	39	novel_in_catalog	DDX60L	novel	3509	9	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	4429	junction_38	42152.589085292144	NA	4	NA	TRUE	NA	NA	NA	C	coding	1707	5124	352	5475	15.0	-6	True	AATAAA	-14
PB.9059.1	chr4	-	6926	39	novel_not_in_catalog	DDX60L	novel	3509	9	NA	NA	-1	-1	any annotated donor/acceptor	TRUE	canonical	1	1439	junction_38	42949.482196982535	NA	1	NA	TRUE	NA	NA	NA	C	coding	1706	5121	395	5515	15.0	-6	True	AATAAA	-14
PB.10781.10	chr7	-	5390	33	incomplete-splice_match	LAMB1	ENST00000222399.10	5725	34	65	412	-3	-412	3prime_fragment	FALSE	canonical	1	355755	junction_26	292783.4515622195	NA	0	NA	TRUE	NA	NA	NA	C	coding	1741	5223	167	5389	15.0	-33	True	NA	NA
PB.9059.7	chr4	-	7041	40	novel_not_in_catalog	DDX60L	novel	3509	9	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_39	46232.35351542554	NA	4	NA	TRUE	NA	NA	NA	C	coding	1529	4590	395	4984	10.0	-6	True	AATAAA	-13
PB.9059.4	chr4	-	6789	38	novel_in_catalog	DDX60L	novel	3509	9	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	33876	junction_37	37441.858839580054	NA	0	NA	TRUE	NA	NA	NA	C	coding	1707	5124	255	5378	15.0	764	False	AATAAA	-14
PB.5809.4	chr19	-	937	5	full-splice_match	SMIM7	ENST00000487416.6	2776	5	26	1813	-1	30	multi-exon	FALSE	canonical	1	1119683	junction_2	124396.28285242288	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	12	True	AATAAA	-27
PB.6787.15	chr2	-	2308	8	full-splice_match	NR4A2	ENST00000339562.8	3472	8	-1	1165	-1	147	multi-exon	FALSE	canonical	1	78091	junction_7	64206.55093572014	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	365	2161	80.0	-34	True	NA	NA
PB.9059.8	chr4	-	7049	40	novel_not_in_catalog	DDX60L	novel	3509	9	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_39	45647.13290357782	NA	1	NA	TRUE	NA	NA	NA	C	coding	1706	5121	520	5640	10.0	-6	True	AATAAA	-12
PB.3241.1	chr13	-	2638	3	novel_not_in_catalog	GGACT	novel	2678	2	NA	NA	-55	0	any annotated donor/acceptor	FALSE	canonical	1	19813	junction_2	15373.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	153	462	230	691	40.0	-26	True	ATTAAA	-15
PB.3461.21	chr14	-	3106	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	164	7319	-7	334	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	197	2323	45.0	45	True	AATAAA	-40
PB.3461.22	chr14	-	2706	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	147	7736	-24	-83	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	214	2340	20.0	28	True	NA	NA
PB.3461.23	chr14	-	1822	15	incomplete-splice_match	EXOC5	ENST00000621441.4	10589	18	96	17530	-13	-9492	3prime_fragment	FALSE	canonical	1	29018	junction_12	127429.1984859652	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1557	265	1821	70.0	-23	True	AATATA	-39
PB.12104.2	chrX	+	4499	10	novel_not_in_catalog	RRAGB	novel	2061	10	NA	NA	2	11	intron_retention	FALSE	canonical	1	11611	junction_7	64442.172920886456	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	578	1198	5.0	2	True	AATAAA	-28
PB.12104.3	chrX	+	2042	10	full-splice_match	RRAGB	ENST00000374941.8	2061	10	18	1	8	-1	multi-exon	FALSE	canonical	1	101006	junction_6	31520.446468214177	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	572	1612	15.0	8	True	AATAAA	-16
PB.7057.2	chr2	+	3354	14	novel_in_catalog	SP100	novel	3882	25	NA	NA	25	-1	intron_retention	FALSE	canonical	1	431024	junction_1	121016.17387492236	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	117	1217	20.0	0	True	AATAAA	-16
PB.12104.1	chrX	+	2048	2	incomplete-splice_match	RRAGB	ENST00000262850.7	1573	11	-139	37661	-3	-11021	3prime_fragment	FALSE	canonical	1	148731	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-3	True	NA	NA
PB.6787.16	chr2	-	3997	1	novel_in_catalog	NR4A2	novel	3472	8	NA	NA	9	705	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	298	897	2519	3415	80.0	-21	True	NA	NA
PB.6670.2	chr2	+	1881	11	novel_not_in_catalog	MRPS9	novel	1500	11	NA	NA	93	25	any annotated donor/acceptor	FALSE	canonical	1	15924	junction_6	168479.63104114396	NA	2	1	TRUE	NA	NA	NA	C	coding	189	570	1148	1717	80.0	-8	True	TTTAAA	-25
PB.6670.1	chr2	+	1376	11	full-splice_match	MRPS9	ENST00000258455.7	1500	11	89	35	89	25	multi-exon	FALSE	canonical	1	389914	junction_7	95662.77499759245	NA	1	1	TRUE	NA	NA	NA	C	coding	396	1191	22	1212	80.0	-12	True	TTTAAA	-25
PB.7388.5	chr20	-	2455	5	full-splice_match	PRELID3B	ENST00000371033.9	943	5	-24	-1488	-20	-1	multi-exon	FALSE	canonical	1	43323	junction_3	356124.251521151	NA	3	NA	TRUE	NA	NA	NA	C	coding	164	495	100	594	25.0	-44	True	AATAAA	-17
PB.1643.1	chr10	-	2702	21	full-splice_match	XPNPEP1	ENST00000502935.5	2539	21	105	-268	0	268	multi-exon	FALSE	canonical	1	338057	junction_19	119183.63491440425	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	16	2016	40.0	7	True	AATAAA	-10
PB.8116.9	chr3	+	5543	5	novel_in_catalog	DAG1	novel	5576	3	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	7059	junction_2	216543.0354623533	NA	2	NA	TRUE	NA	NA	NA	C	coding	893	2682	448	3129	20.0	-38	True	AATAAA	-18
PB.6782.11	chr2	-	1764	14	full-splice_match	STAM2	ENST00000263904.4	5701	14	258	3679	-5	-48	multi-exon	FALSE	canonical	1	138483	junction_13	48716.85664175444	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	93	1670	50.0	27	True	ATTAAA	-17
PB.7388.1	chr20	-	3875	5	novel_in_catalog	PRELID3B	novel	2626	6	NA	NA	-6	-1	intron_retention	TRUE	canonical	1	299234	junction_3	263929.4434535251	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	86	616	25.0	-30	True	AATAAA	-17
PB.7388.3	chr20	-	2695	6	novel_not_in_catalog	PRELID3B	novel	2626	6	NA	NA	-57	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	350774.4387220939	NA	4	2	TRUE	NA	NA	NA	C	coding	173	522	314	835	25.0	534	False	AATAAA	-16
PB.7388.2	chr20	-	2591	6	full-splice_match	PRELID3B	ENST00000355937.8	2626	6	0	35	0	-35	multi-exon	FALSE	canonical	1	299234	junction_4	237776.255104163	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	180	764	55.0	591	False	AATAAA	-20
PB.363.3	chr1	-	1068	7	novel_in_catalog	ERI3	novel	1097	7	NA	NA	2134	-23	no_combination_of_known_junctions	FALSE	canonical	1	39516	junction_6	301221.8387306106	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	121	603	20.0	2383	False	AATAAA	-16
PB.7388.9	chr20	-	2372	6	full-splice_match	PRELID3B	ENST00000355937.8	2626	6	83	171	-17	-171	multi-exon	FALSE	canonical	1	299234	junction_4	237776.255104163	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	97	681	20.0	-41	True	TATAAA	-5
PB.1643.3	chr10	-	4519	18	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	-1	0	intron_retention	FALSE	canonical	1	8530	junction_15	177591.44496898775	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	433	1233	5.0	40	False	AATAAA	-16
PB.11674.1	chr9	-	4071	10	novel_not_in_catalog	TSTD2	novel	4320	10	NA	NA	-93	0	any annotated donor/acceptor	FALSE	canonical	1	766	junction_9	45841.44985695429	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	132	1682	15.0	-36	True	AATAAA	-25
PB.11591.5	chr9	+	4385	1	full-splice_match	FAM122A	ENST00000394264.5	4575	1	7	183	7	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	287	864	125	988	25.0	-24	True	ATTAAA	-14
PB.11591.7	chr9	+	1250	1	full-splice_match	FAM122A	ENST00000394264.5	4575	1	33	3292	33	-3292	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	287	864	99	962	40.0	2	True	AATACA	-23
PB.1643.2	chr10	-	4689	20	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	-2	0	intron_retention	FALSE	canonical	1	338057	junction_18	118334.93519280716	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	81	1403	5.0	39	False	AATAAA	-16
PB.11591.1	chr9	+	2543	15	novel_in_catalog	PIP5K1B	novel	2664	14	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	1	32574	junction_1	26042.270392751547	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	196	1818	25.0	-6	True	AATAAA	-14
PB.1807.1	chr11	-	4846	24	novel_not_in_catalog	DENND5A	novel	5031	23	NA	NA	-2	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_23	161982.0546235424	NA	0	NA	TRUE	NA	NA	NA	A	coding	1287	3864	146	4009	50.0	23	False	AATAAA	-8
PB.11591.2	chr9	+	2719	16	full-splice_match	PIP5K1B	ENST00000265382.7	2654	16	-66	1	-66	0	multi-exon	FALSE	canonical	1	28200	junction_1	30240.93144876475	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	372	1994	25.0	-346	False	AATAAA	-14
PB.1643.5	chr10	-	2907	21	novel_not_in_catalog	XPNPEP1	novel	4384	17	NA	NA	32	0	any annotated donor/acceptor	FALSE	canonical	1	1064	junction_20	164592.46948687386	NA	1	NA	TRUE	NA	NA	NA	C	coding	661	1986	504	2489	5.0	153	False	AATAAA	-16
PB.8259.1	chr3	-	3231	1	antisense	novelGene_ST3GAL6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-9788	False	ACTAAA	-29
PB.10483.3	chr7	+	4159	1	full-splice_match	AC018647.2	ENST00000605778.1	4200	1	14	27	14	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-8	True	NA	NA
PB.5593.2	chr19	+	1371	4	full-splice_match	GADD45B	ENST00000215631.8	1373	4	0	2	0	-2	multi-exon	FALSE	canonical	1	996342	junction_1	93783.60312975824	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	233	715	5.0	0	True	AATAAA	-14
PB.1643.7	chr10	-	2603	21	novel_not_in_catalog	XPNPEP1	novel	4384	17	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	266008.56321960763	NA	3	2	TRUE	NA	NA	NA	C	coding	274	825	374	1198	5.0	-3	True	AATAAA	-16
PB.8278.2	chr3	+	1896	3	novel_not_in_catalog	LINC02085	novel	2051	4	NA	NA	8277	5	any annotated donor/acceptor	FALSE	canonical	1	97	junction_1	1700.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	116	351	57	407	25.0	-26	False	NA	NA
PB.1074.4	chr1	+	3421	23	novel_not_in_catalog	IKBKE	novel	1595	8	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	2687	junction_21	43538.07739657892	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	342	2516	0.0	0	True	AATAAA	-21
PB.1140.19	chr1	+	3498	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	19	-782	19	458	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	155	2512	50.0	-7	True	AATAAA	-17
PB.3942.2	chr15	+	3232	20	novel_not_in_catalog	ZWILCH	novel	2206	18	NA	NA	14	0	any annotated donor/acceptor	TRUE	canonical	1	48	junction_18	97224.10936229171	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	209	1984	60.0	-4	True	AATAAA	-11
PB.4672.1	chr17	-	2281	4	novel_not_in_catalog	ITGAE	novel	672	4	NA	NA	22	-3	intron_retention	FALSE	canonical	0	0	junction_3	234596.85750287073	NA	1	NA	TRUE	NA	NA	NA	A	coding	104	315	3	317	20.0	19	True	AATAAA	-16
PB.6780.14	chr2	+	3320	23	novel_in_catalog	RIF1	novel	7897	36	NA	NA	15	4968	intron_retention	FALSE	canonical	1	2521	junction_3	56354.2520069645	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2505	815	3319	80.0	13	True	AAAAAG	-18
PB.6780.15	chr2	+	6334	29	incomplete-splice_match	RIF1	ENST00000430328.6	7992	34	-174	10042	16	-10042	3prime_fragment	FALSE	canonical	1	108790	junction_2	50688.45095688133	NA	1	NA	TRUE	NA	NA	NA	C	coding	1942	5826	509	6334	75.0	14	True	NA	NA
PB.6780.16	chr2	+	6169	30	incomplete-splice_match	RIF1	ENST00000444746.6	7897	36	40	9820	-18	-9820	3prime_fragment	FALSE	canonical	1	33839	junction_1	57784.031371528414	NA	0	NA	TRUE	NA	NA	NA	C	coding	2016	6048	122	6169	70.0	21	True	AAGAAA	-9
PB.6780.17	chr2	+	6529	29	incomplete-splice_match	RIF1	ENST00000428287.6	7722	35	57	9820	2	-9820	internal_fragment	FALSE	canonical	1	108790	junction_2	50688.45095688133	NA	7	NA	TRUE	NA	NA	NA	C	coding	2016	6048	482	6529	70.0	41	True	AAGAAA	-9
PB.6780.10	chr2	+	5269	29	incomplete-splice_match	RIF1	ENST00000430328.6	7992	34	-182	11115	8	9163	3prime_fragment	FALSE	canonical	1	108790	junction_2	50688.45095688133	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4752	517	5268	55.0	6	True	AATGAA	-20
PB.6780.11	chr2	+	3525	25	novel_not_in_catalog	RIF1	novel	7897	36	NA	NA	9	4968	intron_retention	FALSE	canonical	1	30206	junction_15	50010.009754697414	NA	1	NA	TRUE	NA	NA	NA	C	coding	1003	3009	516	3524	80.0	7	True	AAAAAG	-18
PB.2030.18	chr11	-	2448	12	novel_in_catalog	SF1	novel	2947	13	NA	NA	9	-8	no_combination_of_known_junctions	FALSE	canonical	1	10685	junction_1	839208.9365366206	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	142	1608	5.0	-3	True	AATAAA	-14
PB.2030.19	chr11	-	2101	13	full-splice_match	SF1	ENST00000377390.7	3470	13	188	1181	0	-135	multi-exon	FALSE	canonical	1	771616	junction_1	685664.1244233529	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	151	2070	25.0	-12	True	AATATA	-10
PB.2030.16	chr11	-	2628	13	novel_not_in_catalog	SF1	novel	2947	13	NA	NA	-10	-6	any annotated donor/acceptor	FALSE	canonical	1	69949	junction_4	883180.7572213181	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	161	1786	5.0	-22	True	AATAAA	-16
PB.2030.15	chr11	-	3665	14	novel_in_catalog	SF1	novel	2947	13	NA	NA	-7	-5	intron_retention	FALSE	canonical	1	12490	junction_13	924330.5050199255	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	617	2458	5.0	-2	True	AATAAA	-17
PB.2030.12	chr11	-	2568	12	novel_in_catalog	SF1	novel	2947	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	94775	junction_10	922899.0154928666	NA	7	NA	TRUE	NA	NA	NA	C	coding	433	1302	420	1721	5.0	-12	True	AATAAA	-21
PB.1087.5	chr1	+	1385	10	full-splice_match	CD55	ENST00000367064.8	2892	10	255	1252	-12	1	multi-exon	FALSE	canonical	1	201639	junction_9	518153.7491122319	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	136	1281	15.0	-9636	False	AATAAA	-19
PB.2030.10	chr11	-	2654	14	novel_not_in_catalog	SF1	novel	2947	13	NA	NA	-4	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	960967.5293806081	NA	5	1	TRUE	NA	NA	NA	C	coding	599	1800	7	1806	5.0	1	True	AATAAA	-22
PB.2030.11	chr11	-	2745	14	novel_not_in_catalog	SF1	novel	2947	13	NA	NA	10	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	871923.6113130391	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	252	1898	5.0	-8	True	AATAAA	-21
PB.7057.1	chr2	+	2226	23	novel_in_catalog	SP100	novel	3882	25	NA	NA	24	2	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	253863.113753739	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	118	2124	10.0	-1	True	CATAAA	-19
PB.5529.2	chr18	-	2766	2	novel_not_in_catalog	AC103808.2	novel	594	3	NA	NA	-21869	4650	intron_retention	FALSE	canonical	1	335	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	TTTAAA	-11
PB.1087.4	chr1	+	2606	10	novel_not_in_catalog	CD55	novel	2892	10	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	17845	junction_7	562039.7102973559	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	138	1244	35.0	-9638	False	AATAAA	-18
PB.7706.3	chr22	-	2302	3	novel_in_catalog	DUSP18	novel	598	3	NA	NA	8	-21	intron_retention	FALSE	canonical	1	8568	junction_1	17943.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	494	1060	100.0	-29	True	AAAAAG	-14
PB.7706.2	chr22	-	2409	3	novel_not_in_catalog	DUSP18	novel	598	3	NA	NA	10	-21	intron_retention	FALSE	canonical	0	0	junction_2	22227.5	NA	1	1	TRUE	NA	NA	NA	C	coding	188	567	458	1024	100.0	-27	True	AAAAAG	-14
PB.7706.1	chr22	-	2445	2	full-splice_match	DUSP18	ENST00000334679.3	2479	2	13	21	8	-21	multi-exon	FALSE	canonical	1	44455	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	494	1060	100.0	-29	True	AAAAAG	-14
PB.1140.14	chr1	+	3153	22	novel_in_catalog	MIA3	novel	8142	28	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	50489	junction_3	166172.59377953847	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	179	1195	15.0	-31	True	CATAAA	-19
PB.235.4	chr1	-	2304	11	novel_in_catalog	MECR	novel	2416	10	NA	NA	-3	-90	combination_of_known_junctions	FALSE	canonical	1	13089	junction_10	111513.81682213195	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	40	1245	85.0	-22	True	NA	NA
PB.1074.2	chr1	+	3191	21	novel_in_catalog	IKBKE	novel	1595	8	NA	NA	-23	0	no_combination_of_known_junctions	FALSE	canonical	1	2719	junction_20	34338.1473137384	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	369	2447	0.0	0	True	AATAAA	-20
PB.743.4	chr1	+	3808	16	full-splice_match	PIP5K1A	ENST00000368888.8	2134	16	-32	-1642	-8	-1	multi-exon	FALSE	canonical	1	22545	junction_10	90413.53231271425	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	455	2143	15.0	-9	True	AATAAA	-19
PB.1087.2	chr1	+	2589	10	full-splice_match	CD55	ENST00000367064.8	2892	10	301	2	-24	-2	multi-exon	FALSE	canonical	1	201639	junction_9	518153.7491122319	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	90	1235	45.0	-1	True	AATAAA	-17
PB.747.14	chr1	-	3548	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	5	-53	intron_retention	FALSE	canonical	1	48756	junction_10	131544.32478689455	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	205	2055	35.0	24	False	NA	NA
PB.5529.1	chr18	-	5659	2	novel_not_in_catalog	AC103808.2	novel	594	3	NA	NA	-21853	7559	intron_retention	FALSE	canonical	1	335	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	145	438	4187	4624	45.0	-1	True	AATAAA	-13
PB.1087.1	chr1	+	2088	10	full-splice_match	CD55	ENST00000367064.8	2892	10	338	466	13	-1	multi-exon	FALSE	canonical	1	201639	junction_9	518153.7491122319	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	53	1198	35.0	-9553	False	AATAAA	-17
PB.747.15	chr1	-	3769	10	novel_in_catalog	RFX5	novel	3576	11	NA	NA	3	-56	intron_retention	FALSE	canonical	1	62823	junction_9	171663.15966838467	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	942	2279	35.0	2	True	NA	NA
PB.4789.1	chr17	-	1773	5	full-splice_match	CENPV	ENST00000476243.5	1770	5	-34	31	9	-31	multi-exon	FALSE	canonical	1	152444	junction_3	221917.798673715	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	55	582	65.0	-41	True	NA	NA
PB.9860.3	chr6	+	3410	29	novel_in_catalog	VARS2	novel	6054	41	NA	NA	-31	0	no_combination_of_known_junctions	FALSE	canonical	1	5047	junction_20	88390.31387238753	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	78	3164	25.0	-8539	False	GATAAA	-14
PB.4789.3	chr17	-	1136	5	full-splice_match	CENPV	ENST00000299736.4	1165	5	17	12	17	-12	multi-exon	FALSE	canonical	1	378525	junction_3	142616.246732271	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	47	865	40.0	-33	True	AATAAA	-8
PB.4789.2	chr17	-	2373	4	novel_in_catalog	CENPV	novel	554	2	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	446913	junction_3	118871.7239380333	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	28	540	20.0	-14	True	AATAAA	-19
PB.4789.4	chr17	-	1959	3	incomplete-splice_match	CENPV	ENST00000476243.5	1770	5	6	5364	-5	140	3prime_fragment	FALSE	canonical	1	152444	junction_1	147234.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	175	528	15	542	45.0	-1	True	GATAAA	-19
PB.9860.4	chr6	+	3503	30	novel_not_in_catalog	VARS2	novel	6054	41	NA	NA	-8	1	any annotated donor/acceptor	FALSE	canonical	1	3045	junction_11	92741.6195018269	NA	2	1	TRUE	NA	NA	NA	C	coding	660	1983	1274	3256	20.0	-8516	False	GATAAA	-15
PB.9860.5	chr6	+	3606	30	full-splice_match	VARS2	ENST00000541562.5	3566	30	4	-44	4	1	multi-exon	FALSE	canonical	1	13469	junction_1	84470.77858415627	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	78	3359	20.0	-8504	False	GATAAA	-15
PB.1817.1	chr11	-	4018	6	full-splice_match	RNF141	ENST00000265981.6	4074	6	-7	63	6	-63	multi-exon	FALSE	canonical	1	316335	junction_5	89240.2975409652	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	151	843	35.0	-38	True	AATATA	-24
PB.1817.2	chr11	-	3871	6	full-splice_match	RNF141	ENST00000265981.6	4074	6	19	184	-8	61	multi-exon	FALSE	canonical	1	316335	junction_5	89240.2975409652	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	125	817	35.0	-12	True	AATATA	-20
PB.1817.3	chr11	-	3988	7	novel_in_catalog	RNF141	novel	4074	6	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	1	2652	junction_5	216995.46930600496	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	605	1006	40.0	-12	True	AATAAA	-17
PB.1817.4	chr11	-	3797	6	full-splice_match	RNF141	ENST00000265981.6	4074	6	21	256	-6	-11	multi-exon	FALSE	canonical	1	316335	junction_5	89240.2975409652	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	123	815	40.0	-10	True	AATAAA	-17
PB.1817.5	chr11	-	2939	6	full-splice_match	RNF141	ENST00000265981.6	4074	6	-13	1148	0	-903	multi-exon	FALSE	canonical	1	316335	junction_5	89240.2975409652	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	157	849	25.0	-44	True	AATAAA	-25
PB.1817.6	chr11	-	2065	6	full-splice_match	RNF141	ENST00000265981.6	4074	6	-11	2020	2	-1775	multi-exon	FALSE	canonical	1	316335	junction_5	89240.2975409652	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	155	847	85.0	-42	True	NA	NA
PB.6833.10	chr2	+	2495	16	full-splice_match	DYNC1I2	ENST00000409197.5	2572	16	83	-6	0	1	multi-exon	FALSE	canonical	1	295	junction_4	73533.61094610636	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	129	1967	25.0	0	True	AATAAA	-23
PB.8437.1	chr3	+	3071	24	full-splice_match	RASA2	ENST00000286364.7	5614	24	-20	2563	-18	466	multi-exon	FALSE	canonical	1	70841	junction_1	37418.834321668	NA	1	NA	TRUE	NA	NA	NA	C	coding	849	2550	56	2605	85.0	-11	True	NA	NA
PB.11502.5	chr9	+	3960	6	novel_in_catalog	CHMP5	novel	1957	7	NA	NA	84	-33	intron_retention	FALSE	canonical	1	403878	junction_5	352196.562125981	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	2831	3313	55.0	-23	True	AATAAA	-9
PB.5933.8	chr19	+	3026	19	full-splice_match	HAUS5	ENST00000203166.9	4283	19	-15	1272	3	468	multi-exon	FALSE	canonical	1	119795	junction_15	37819.42433822455	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	92	1942	10.0	1	True	AATAGA	-19
PB.5933.3	chr19	+	4046	19	full-splice_match	HAUS5	ENST00000203166.9	4283	19	-16	253	2	-253	multi-exon	FALSE	canonical	1	119795	junction_15	37819.42433822455	NA	3	NA	TRUE	NA	NA	NA	C	coding	616	1851	93	1943	35.0	0	True	NA	NA
PB.5933.2	chr19	+	2650	18	novel_in_catalog	HAUS5	novel	2758	17	NA	NA	-7	0	intron_retention	FALSE	canonical	1	119795	junction_14	37023.42400525192	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	434	2035	15.0	-17	True	NA	NA
PB.5933.1	chr19	+	4318	19	full-splice_match	HAUS5	ENST00000203166.9	4283	19	-35	0	-9	0	multi-exon	FALSE	canonical	1	119795	junction_15	37819.42433822455	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	112	1962	45.0	-19	True	NA	NA
PB.747.13	chr1	-	3536	10	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	3855	junction_7	160235.4085802788	NA	4	1	TRUE	NA	NA	NA	C	coding	527	1584	409	1992	5.0	-7	True	NA	NA
PB.5933.7	chr19	+	2222	19	full-splice_match	HAUS5	ENST00000203166.9	4283	19	-20	2081	-2	-289	multi-exon	FALSE	canonical	1	119795	junction_15	37819.42433822455	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	97	1947	60.0	-4	True	NA	NA
PB.5933.6	chr19	+	2895	18	novel_not_in_catalog	HAUS5	novel	2758	17	NA	NA	4	2	intron_retention	FALSE	canonical	1	6647	junction_4	55441.07504381422	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	423	1532	10.0	-6	True	NA	NA
PB.5933.5	chr19	+	2822	18	full-splice_match	HAUS5	ENST00000585968.5	2762	18	-8	-52	0	0	multi-exon	FALSE	canonical	1	136436	junction_13	35106.774263133746	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	103	1461	15.0	-10	True	NA	NA
PB.5933.4	chr19	+	2574	19	full-splice_match	HAUS5	ENST00000203166.9	4283	19	-29	1738	-3	2	multi-exon	FALSE	canonical	1	119795	junction_15	37819.42433822455	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	106	1956	10.0	-13	True	NA	NA
PB.8587.25	chr3	+	3206	8	incomplete-splice_match	EIF4A2	ENST00000443963.5	1729	10	-20	3	0	0	intron_retention	FALSE	canonical	1	780423	junction_1	1059689.284355079	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	183	1082	20.0	0	True	AATAAA	-16
PB.9594.14	chr5	-	2247	12	full-splice_match	CLINT1	ENST00000523908.5	2346	12	-14	113	-12	-47	multi-exon	FALSE	canonical	1	297941	junction_2	188177.4856262781	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	188	2119	50.0	-31	True	AATAAA	-16
PB.9594.15	chr5	-	2193	12	full-splice_match	CLINT1	ENST00000411809.6	3440	12	18	1229	-12	-47	multi-exon	FALSE	canonical	1	432846	junction_2	164381.50245020003	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	188	2065	50.0	-31	True	AATAAA	-16
PB.9594.10	chr5	-	3334	12	full-splice_match	CLINT1	ENST00000523908.5	2346	12	18	-1006	8	-108	multi-exon	FALSE	canonical	1	297941	junction_2	188177.4856262781	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	156	2087	20.0	1	True	AATAAA	-24
PB.9594.11	chr5	-	3277	12	full-splice_match	CLINT1	ENST00000411809.6	3440	12	48	115	6	-113	multi-exon	FALSE	canonical	1	432846	junction_2	164381.50245020003	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	158	2035	30.0	-1	True	AATAAA	-19
PB.9594.12	chr5	-	2525	12	full-splice_match	CLINT1	ENST00000523908.5	2346	12	78	-257	68	257	multi-exon	FALSE	canonical	1	297941	junction_2	188177.4856262781	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	96	2027	75.0	61	False	ATTAAA	-42
PB.9594.13	chr5	-	2581	12	full-splice_match	CLINT1	ENST00000411809.6	3440	12	0	859	0	257	multi-exon	FALSE	canonical	1	432846	junction_2	164381.50245020003	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	206	2083	75.0	-49	True	ATTAAA	-42
PB.6024.3	chr19	+	3214	29	full-splice_match	ARHGEF1	ENST00000354532.7	3243	29	32	-3	9	-2	multi-exon	FALSE	canonical	1	255244	junction_13	251558.63609225518	NA	0	NA	TRUE	NA	NA	NA	C	coding	912	2739	117	2855	25.0	-7	True	AATATA	-10
PB.6024.2	chr19	+	3403	30	novel_not_in_catalog	ARHGEF1	novel	3243	29	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_13	292314.3588172413	NA	3	1	TRUE	NA	NA	NA	C	coding	555	1668	1378	3045	30.0	-15	True	AATATA	-9
PB.6024.1	chr19	+	4348	29	novel_in_catalog	ARHGEF1	novel	3243	29	NA	NA	1	2	intron_retention	TRUE	canonical	1	108817	junction_13	263972.11025455873	NA	1	1	TRUE	NA	NA	NA	C	coding	571	1716	2275	3990	30.0	-15	True	AATATA	-9
PB.6024.7	chr19	+	3252	29	novel_in_catalog	ARHGEF1	novel	3243	29	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	1	23077	junction_19	278999.4072710106	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	108	1964	30.0	2	True	AATATA	-6
PB.6024.6	chr19	+	3107	28	full-splice_match	ARHGEF1	ENST00000347545.8	3091	28	-25	9	16	2	multi-exon	FALSE	canonical	1	14027	junction_4	287944.39966544596	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	110	2749	30.0	0	True	AATATA	-9
PB.6024.5	chr19	+	3718	29	novel_not_in_catalog	ARHGEF1	novel	3243	29	NA	NA	14	2	intron_retention	FALSE	canonical	0	0	junction_13	274578.9634476269	NA	3	1	TRUE	NA	NA	NA	C	coding	571	1716	1645	3360	30.0	-2	True	AATATA	-9
PB.6024.4	chr19	+	3377	30	full-splice_match	ARHGEF1	ENST00000599846.5	3393	30	13	3	13	2	multi-exon	FALSE	canonical	1	14107	junction_13	291048.00325688417	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	113	3019	30.0	-3	True	AATATA	-9
PB.7285.3	chr20	+	4027	8	novel_not_in_catalog	RPRD1B	novel	3874	7	NA	NA	-11	-7	any annotated donor/acceptor	FALSE	canonical	1	1087	junction_6	94593.90750692441	NA	3	NA	TRUE	NA	NA	NA	C	coding	323	972	414	1385	30.0	-25	True	AATAAA	-14
PB.6319.1	chr2	+	2826	1	novel_in_catalog	MIR3681HG	novel	2183	6	NA	NA	83511	90694	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	6190	False	AATAAA	-20
PB.6024.9	chr19	+	3404	28	full-splice_match	ARHGEF1	ENST00000600274.5	3439	28	25	10	-16	1	multi-exon	FALSE	canonical	1	255244	junction_12	252918.1632153417	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	801	3047	30.0	8	True	AATATA	-8
PB.6024.8	chr19	+	3246	30	novel_not_in_catalog	ARHGEF1	novel	3243	29	NA	NA	-18	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	305281.20359966543	NA	4	2	TRUE	NA	NA	NA	C	coding	479	1440	1450	2889	30.0	6	True	AATATA	-8
PB.1058.3	chr1	-	4291	14	full-splice_match	RBBP5	ENST00000264515.10	4404	14	0	113	0	-113	multi-exon	FALSE	canonical	1	104963	junction_1	52188.404912524486	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	143	1759	100.0	-13	True	NA	NA
PB.1058.2	chr1	-	4272	14	full-splice_match	RBBP5	ENST00000367164.1	4290	14	12	6	12	-6	multi-exon	FALSE	canonical	1	36728	junction_1	63058.95237749154	NA	4	NA	TRUE	NA	NA	NA	C	coding	500	1503	131	1633	40.0	-1	True	AATAAA	-15
PB.1058.1	chr1	-	4386	14	full-splice_match	RBBP5	ENST00000264515.10	4404	14	12	6	12	-6	multi-exon	FALSE	canonical	1	104963	junction_1	52188.404912524486	NA	3	NA	TRUE	NA	NA	NA	C	coding	538	1617	131	1747	40.0	-1	True	AATAAA	-15
PB.747.19	chr1	-	2348	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	62823	junction_10	127517.73644748404	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	273	2123	15.0	352	False	AATAAA	-15
PB.2820.3	chr12	-	4233	16	full-splice_match	CDK17	ENST00000543119.6	2442	16	30	-1821	30	-342	multi-exon	FALSE	canonical	1	133606	junction_15	58623.29261786649	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	495	2066	20.0	-12	True	TATAAA	-14
PB.2820.2	chr12	-	4077	17	full-splice_match	CDK17	ENST00000261211.7	4157	17	-5	85	-5	-85	multi-exon	FALSE	canonical	1	133606	junction_16	59055.90025715969	NA	7	1	TRUE	NA	NA	NA	C	coding	523	1572	610	2181	35.0	-4	True	TATAAA	-19
PB.2820.1	chr12	-	4704	16	full-splice_match	CDK17	ENST00000543119.6	2442	16	-85	-2177	-5	14	multi-exon	FALSE	canonical	1	133606	junction_15	58623.29261786649	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	610	2181	25.0	-4	True	TATAAA	-28
PB.2820.7	chr12	-	4305	15	novel_in_catalog	CDK17	novel	4157	17	NA	NA	-28	-293	intron_retention	FALSE	canonical	1	2670	junction_9	95951.37566773398	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	1349	2089	20.0	-27	True	NA	NA
PB.2820.5	chr12	-	3695	17	full-splice_match	CDK17	ENST00000261211.7	4157	17	121	341	41	-341	multi-exon	FALSE	canonical	1	133606	junction_16	59055.90025715969	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	484	2055	20.0	-1	True	TATAAA	-15
PB.2820.4	chr12	-	4215	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	0	-296	any annotated donor/acceptor	FALSE	canonical	1	5924	junction_1	89677.26971076531	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	605	2146	30.0	1	True	NA	NA
PB.2820.9	chr12	-	3481	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	-131	-296	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	84385.39881010128	NA	3	1	TRUE	NA	NA	NA	C	coding	523	1572	225	1796	30.0	1026	False	NA	NA
PB.2820.8	chr12	-	4331	15	novel_in_catalog	CDK17	novel	4157	17	NA	NA	-5	-296	intron_retention	FALSE	canonical	1	5689	junction_7	92644.0632946321	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	610	2118	30.0	-4	True	NA	NA
PB.8714.3	chr4	+	1986	7	novel_not_in_catalog	PACRGL	novel	1394	10	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	64667.54886189483	NA	10	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	ATTAAA	-19
PB.8714.2	chr4	+	1761	5	full-splice_match	PACRGL	ENST00000444671.6	1720	5	-13	-28	4	-8	multi-exon	TRUE	canonical	1	18880	junction_3	71152.92887330781	NA	2	NA	TRUE	NA	NA	NA	C	coding	123	372	382	753	25.0	10	True	ATTAAA	-14
PB.3671.10	chr14	+	2078	3	full-splice_match	WDR20	ENST00000342702.7	2391	3	19	294	1	102	multi-exon	FALSE	canonical	1	83182	junction_2	20744.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	13	1722	25.0	-2	True	ATTAAA	-16
PB.6780.1	chr2	+	3086	26	incomplete-splice_match	RIF1	ENST00000428287.6	7722	35	12	15310	-2	4968	3prime_fragment	FALSE	canonical	1	25057	junction_1	51413.010133015945	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3033	53	3085	80.0	-4	True	AAAAAG	-18
PB.11272.4	chr8	+	1700	1	novel_in_catalog	AP000424.1	novel	558	2	NA	NA	13	-5751	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.9802.2	chr6	+	2578	1	full-splice_match	HCG11	ENST00000411553.3	5696	1	139	2979	139	-2979	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	119	False	ATTAAA	-23
PB.11156.19	chr8	+	2460	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	83	2620	15	-1	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	243	2000	20.0	-7	True	ATTAAA	-17
PB.1217.6	chr1	-	2894	13	novel_not_in_catalog	B3GALNT2	novel	2015	12	NA	NA	0	2702	any annotated donor/acceptor	FALSE	canonical	1	4674	junction_1	68821.52025468972	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	230	1753	35.0	-30	True	AATAAA	-16
PB.6155.14	chr19	-	2585	3	full-splice_match	NUP62	ENST00000352066.7	2870	3	269	16	3	-16	multi-exon	FALSE	canonical	1	93948	junction_2	129031.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	337	1905	100.0	12	True	NA	NA
PB.11098.8	chr8	+	3913	11	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	5881	junction_1	182953.4486251626	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	58	1161	100.0	-1	True	NA	NA
PB.6786.18	chr2	-	2596	24	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	22	-30	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	270210.02209245693	NA	3	1	TRUE	NA	NA	NA	B	coding	657	1971	626	2596	65.0	-1	True	NA	NA
PB.6786.19	chr2	-	2548	23	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	16	-30	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	313169.7372554585	NA	4	2	TRUE	NA	NA	NA	B	coding	657	1971	578	2548	65.0	-7	True	NA	NA
PB.6786.16	chr2	-	3039	25	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	0	102	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	321538.5117770584	NA	6	2	TRUE	NA	NA	NA	B	coding	719	2160	778	2937	55.0	-1	True	NA	NA
PB.6780.6	chr2	+	4542	30	incomplete-splice_match	RIF1	ENST00000428287.6	7722	35	20	11370	6	8908	3prime_fragment	FALSE	canonical	1	25057	junction_1	58612.724805070364	NA	1	NA	TRUE	NA	NA	NA	C	coding	1499	4497	45	4541	75.0	4	True	NA	NA
PB.6786.14	chr2	-	3199	25	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	9	275	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	321538.5117770584	NA	3	1	TRUE	NA	NA	NA	B	coding	719	2160	765	2924	25.0	555	False	ATTAAA	-17
PB.3273.1	chr13	+	2849	13	full-splice_match	TMCO3	ENST00000434316.6	3050	13	197	4	96	-4	multi-exon	FALSE	canonical	1	310500	junction_1	86696.92754115563	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	163	2196	45.0	-2437	False	AATAAA	-20
PB.9578.3	chr5	-	2178	1	novel_in_catalog	ATOX1	novel	749	5	NA	NA	20	-10406	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	7738	False	NA	NA
PB.1217.4	chr1	-	4414	10	novel_in_catalog	B3GALNT2	novel	2015	12	NA	NA	-16	2702	intron_retention	FALSE	canonical	1	5217	junction_4	78722.18416936272	NA	3	NA	TRUE	NA	NA	NA	C	coding	268	807	190	996	35.0	10	True	AATAAA	-16
PB.11098.3	chr8	+	3851	11	novel_in_catalog	TACC1	novel	5510	13	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	5881	junction_1	183775.0326815098	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	83	1099	100.0	0	True	NA	NA
PB.7905.3	chr3	-	2085	8	full-splice_match	SUMF1	ENST00000405420.2	1128	8	5	-962	1	-1	multi-exon	FALSE	canonical	1	11089	junction_1	98723.76507307691	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	24	1088	15.0	-16	True	NA	NA
PB.6157.4	chr19	+	3035	5	full-splice_match	ZNF473	ENST00000270617.7	4688	5	53	1600	3	5	multi-exon	FALSE	canonical	1	34148	junction_1	17356.37572154682	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	307	2922	20.0	-12	True	AATAAA	-21
PB.6157.5	chr19	+	2834	4	full-splice_match	ZNF473	ENST00000445728.7	2833	4	4	-5	4	5	multi-exon	FALSE	canonical	1	5163	junction_1	30931.88498405273	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	142	2721	20.0	-11	True	AATAAA	-21
PB.6157.6	chr19	+	2901	5	full-splice_match	ZNF473	ENST00000391821.6	4715	5	214	1600	15	5	multi-exon	FALSE	canonical	1	25769	junction_1	20679.925586181398	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	173	2788	20.0	0	True	AATAAA	-21
PB.6157.1	chr19	+	4650	5	full-splice_match	ZNF473	ENST00000270617.7	4688	5	38	0	-12	0	multi-exon	TRUE	canonical	1	34148	junction_1	17356.37572154682	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	322	2937	25.0	-27	True	ATTAAA	-12
PB.6157.2	chr19	+	4522	5	full-splice_match	ZNF473	ENST00000391821.6	4715	5	193	0	-6	0	multi-exon	FALSE	canonical	1	25769	junction_1	20679.925586181398	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	194	2809	25.0	-21	True	ATTAAA	-12
PB.6157.3	chr19	+	3256	5	full-splice_match	ZNF473	ENST00000391821.6	4715	5	195	1264	-4	341	multi-exon	FALSE	canonical	1	25769	junction_1	20679.925586181398	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	192	2807	50.0	-19	True	AATATA	-11
PB.6052.4	chr19	+	2399	5	full-splice_match	ZNF223	ENST00000434772.7	2418	5	22	-3	-10	3	multi-exon	FALSE	canonical	1	24406	junction_4	12663.4448413534	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	234	1682	15.0	-5	True	AATAAA	-22
PB.7262.40	chr20	-	2082	3	full-splice_match	RBM12	ENST00000374114.7	6662	3	0	4580	0	945	multi-exon	FALSE	canonical	1	290176	junction_2	172395.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	606	1818	265	2082	55.0	15	False	AATGAA	-34
PB.77.11	chr1	+	5017	23	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	15896	junction_5	75517.16511541056	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	105	3152	60.0	0	True	AGTAAA	-9
PB.7905.1	chr3	-	2138	9	novel_not_in_catalog	SUMF1	novel	3150	13	NA	NA	0	10614	any annotated donor/acceptor	FALSE	canonical	1	4047	junction_1	96241.75825979853	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	25	1143	5.0	-17	True	AATAAA	-21
PB.6052.1	chr19	+	1846	5	full-splice_match	ZNF223	ENST00000434772.7	2418	5	1	571	1	-571	multi-exon	FALSE	canonical	1	24406	junction_4	12663.4448413534	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	255	1703	40.0	-26	True	NA	NA
PB.6052.2	chr19	+	4575	5	novel_in_catalog	AC067968.1	novel	3766	11	NA	NA	26658	-19892	intron_retention	FALSE	canonical	1	6721	junction_4	18276.565628900305	NA	0	NA	TRUE	NA	NA	NA	B	coding	397	1194	3233	4426	40.0	-24	True	NA	NA
PB.6052.3	chr19	+	3946	6	novel_not_in_catalog	AC067968.1	novel	3766	11	NA	NA	26662	-17417	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	18768.735648412763	NA	3	1	TRUE	NA	NA	NA	B	coding	482	1449	249	1697	25.0	-20	True	NA	NA
PB.7285.4	chr20	+	3423	7	full-splice_match	RPRD1B	ENST00000373433.8	3874	7	444	7	158	-7	multi-exon	FALSE	canonical	1	146016	junction_1	33489.441490316516	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	343	939	30.0	155	False	AATAAA	-14
PB.1129.9	chr1	-	2929	20	incomplete-splice_match	EPRS	ENST00000366923.7	5014	32	221	18699	14	-4	3prime_fragment	FALSE	canonical	1	605857	junction_12	162583.35300161125	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2880	50	2929	70.0	21	True	NA	NA
PB.915.2	chr1	+	3990	6	incomplete-splice_match	TIPRL	ENST00000367833.6	3032	7	-40	3	-40	-3	intron_retention	FALSE	canonical	1	537375	junction_1	116949.81925184836	NA	4	NA	TRUE	NA	NA	NA	C	coding	227	684	189	872	30.0	-5897	False	AATAAA	-20
PB.4294.2	chr16	+	2693	20	full-splice_match	REXO5	ENST00000261377.10	2722	20	25	4	3	-1	multi-exon	FALSE	canonical	1	53975	junction_1	25770.168448880122	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	185	2509	30.0	-3	True	AATAAA	-19
PB.4294.3	chr16	+	2517	19	novel_in_catalog	REXO5	novel	580	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	13793	junction_1	34259.66031615601	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	102	2333	30.0	5	True	AATAAA	-19
PB.4294.1	chr16	+	2572	19	full-splice_match	REXO5	ENST00000566993.5	2549	19	0	-23	0	-3	multi-exon	FALSE	canonical	1	10101	junction_3	35305.57623135159	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	837	2390	30.0	1	True	AATAAA	-17
PB.1168.1	chr1	-	5018	7	full-splice_match	ITPKB	ENST00000272117.7	5822	7	803	1	803	-1	multi-exon	FALSE	canonical	1	143546	junction_3	38982.341593840785	NA	34	NA	TRUE	NA	NA	NA	C	coding	645	1938	101	2038	10.0	2792	False	AATAAA	-13
PB.4294.4	chr16	+	2665	20	full-splice_match	REXO5	ENST00000564274.5	2447	20	-32	-186	3	1	multi-exon	FALSE	canonical	1	8252	junction_1	30871.469629511856	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	155	2479	25.0	15	True	AATAAA	-21
PB.8563.12	chr3	+	5458	33	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	494397	junction_3	758647.9657122339	NA	28	2	TRUE	NA	NA	NA	C	coding	1600	4803	213	5015	15.0	-52	True	ATTAAA	-14
PB.8419.13	chr3	-	4529	34	full-splice_match	STAG1	ENST00000383202.6	6055	34	-12	1538	-2	324	multi-exon	FALSE	canonical	1	147114	junction_30	42407.38547523074	NA	0	NA	TRUE	NA	NA	NA	C	coding	1258	3777	270	4046	25.0	-3	True	ATTAAA	-24
PB.11156.13	chr8	+	4056	2	full-splice_match	YTHDF3	ENST00000522282.1	445	2	59	-3670	0	-2539	multi-exon	FALSE	canonical	1	366213	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-22	True	NA	NA
PB.11770.1	chr9	+	2630	11	full-splice_match	PTGS1	ENST00000614910.5	5039	11	7	2402	0	47	multi-exon	TRUE	canonical	1	117828	junction_2	65843.41963241277	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	74	1873	20.0	-7790	False	AATAAA	-18
PB.11770.2	chr9	+	2509	11	full-splice_match	PTGS1	ENST00000223423.8	2328	11	-58	-123	-2	47	multi-exon	FALSE	canonical	1	39181	junction_9	84960.22738676022	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	64	1752	20.0	-2	True	AATAAA	-18
PB.8815.1	chr4	-	6277	22	full-splice_match	ADAMTS3	ENST00000286657.9	6409	22	121	11	121	-11	multi-exon	FALSE	canonical	1	11965	junction_7	2858.0193853884607	NA	1	NA	TRUE	NA	NA	NA	A	coding	1205	3618	504	4121	45.0	92	False	AATAAA	-7
PB.4327.1	chr16	+	4508	9	full-splice_match	IL21R	ENST00000337929.7	4849	9	348	-7	336	7	multi-exon	FALSE	canonical	1	56923	junction_1	29658.138330555663	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	126	1742	25.0	0	True	NA	NA
PB.4327.3	chr16	+	3204	1	novel_in_catalog	IL21R	novel	4849	9	NA	NA	0	-39313	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	3	12	414	425	80.0	0	True	TTTAAA	-30
PB.3169.7	chr13	-	2619	17	full-splice_match	KPNA3	ENST00000261667.7	4474	17	239	1616	239	287	multi-exon	FALSE	canonical	1	259499	junction_8	104729.81896600578	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	177	1742	80.0	-1	True	TATAAA	-12
PB.4327.5	chr16	+	2541	9	full-splice_match	IL21R	ENST00000337929.7	4849	9	350	1958	338	11	multi-exon	FALSE	canonical	1	56923	junction_1	29658.138330555663	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	124	1740	15.0	2	True	AATAAA	-26
PB.4327.4	chr16	+	3037	10	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	0	21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45759.61888870477	NA	3	NA	TRUE	NA	NA	NA	C	coding	538	1617	198	1814	35.0	0	True	NA	NA
PB.4327.7	chr16	+	2285	8	novel_in_catalog	IL21R	novel	4849	9	NA	NA	0	-428	no_combination_of_known_junctions	TRUE	canonical	1	7115	junction_4	49526.200029347485	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	919	1923	20.0	0	True	AGTAAA	-20
PB.4327.6	chr16	+	2174	9	full-splice_match	IL21R	ENST00000337929.7	4849	9	272	2403	260	-434	multi-exon	FALSE	canonical	1	56923	junction_1	29658.138330555663	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	202	1818	40.0	-76	False	AGTAAA	-14
PB.4327.9	chr16	+	2577	10	full-splice_match	IL21R	ENST00000564089.5	3009	10	6	426	6	-426	multi-exon	FALSE	canonical	1	13163	junction_2	47756.47949057105	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	597	2213	20.0	6	True	AGTAAA	-22
PB.4327.8	chr16	+	4652	10	full-splice_match	IL21R	ENST00000564089.5	3009	10	326	-1969	326	0	multi-exon	FALSE	canonical	1	13163	junction_2	47756.47949057105	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	277	1893	10.0	-10	True	NA	NA
PB.3169.8	chr13	-	2147	17	full-splice_match	KPNA3	ENST00000261667.7	4474	17	366	1961	366	-58	multi-exon	FALSE	canonical	1	259499	junction_8	104729.81896600578	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	50	1615	70.0	-18	True	AATAGA	-45
PB.3360.3	chr14	-	2426	3	novel_in_catalog	SDR39U1	novel	1507	5	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	59730	junction_2	219594.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	1730	2110	10.0	-8	True	AATAAA	-18
PB.3360.2	chr14	-	3023	1	novel_in_catalog	SDR39U1	novel	1233	6	NA	NA	13	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	168	507	2202	2708	15.0	-15	True	AATAAA	-17
PB.5468.8	chr18	-	2377	1	novel_in_catalog	HDHD2	novel	2212	7	NA	NA	77	-13587	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	5767	False	NA	NA
PB.3360.7	chr14	-	1080	5	novel_in_catalog	SDR39U1	novel	1507	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	59730	junction_4	185525.51398459997	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	163	765	15.0	1	True	AATAAA	-17
PB.3360.6	chr14	-	1202	6	full-splice_match	SDR39U1	ENST00000399395.7	1233	6	29	2	2	0	multi-exon	FALSE	canonical	1	59730	junction_5	182109.61564618163	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	6	887	15.0	1	True	AATAAA	-17
PB.2464.1	chr12	+	3371	4	novel_not_in_catalog	AC022075.1	novel	2830	4	NA	NA	-58	488	any annotated donor/acceptor	FALSE	canonical	1	924	junction_3	2603.4143393286863	NA	0	NA	TRUE	NA	NA	NA	A	coding	108	327	128	454	55.0	1	True	NA	NA
PB.4276.1	chr16	+	1433	3	novel_not_in_catalog	AC109446.3	novel	641	3	NA	NA	-120749	-3173	any annotated donor/acceptor	FALSE	canonical	1	17869	junction_1	1963.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	13	True	NA	NA
PB.5468.2	chr18	-	2288	8	novel_not_in_catalog	HDHD2	novel	2212	7	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	1	1134	junction_7	178634.4961701384	NA	2	1	TRUE	NA	NA	NA	C	coding	169	510	508	1017	10.0	3	True	AATAAA	-14
PB.5468.3	chr18	-	2176	7	full-splice_match	HDHD2	ENST00000300605.10	2212	7	28	8	1	-3	multi-exon	FALSE	canonical	1	158860	junction_6	101795.11777981081	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	126	905	10.0	0	True	AATAAA	-14
PB.3360.9	chr14	-	1986	3	full-splice_match	SDR39U1	ENST00000556262.5	1960	3	-14	-12	13	0	multi-exon	FALSE	canonical	1	498919	junction_1	43362.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	955	1671	15.0	-15	True	AATAAA	-17
PB.3360.8	chr14	-	2715	2	novel_in_catalog	SDR39U1	novel	1507	5	NA	NA	-7	0	intron_retention	FALSE	canonical	1	59730	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	1894	2400	15.0	-8	True	AATAAA	-17
PB.5468.6	chr18	-	1987	7	full-splice_match	HDHD2	ENST00000588183.5	2224	7	10	227	3	-7	multi-exon	FALSE	canonical	1	63037	junction_5	138075.2991902325	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	431	940	25.0	2	True	AATAAA	-15
PB.5468.7	chr18	-	1684	7	full-splice_match	HDHD2	ENST00000300605.10	2212	7	-5	533	-5	-308	multi-exon	FALSE	canonical	1	158860	junction_6	101795.11777981081	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	159	938	35.0	5624	False	NA	NA
PB.5468.4	chr18	-	6366	6	novel_in_catalog	HDHD2	novel	2212	7	NA	NA	0	-5	intron_retention	FALSE	canonical	1	158860	junction_5	105991.73864146206	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	127	843	10.0	-1	True	AATAAA	-12
PB.5468.5	chr18	-	1985	7	full-splice_match	HDHD2	ENST00000300605.10	2212	7	0	227	0	-2	multi-exon	FALSE	canonical	1	158860	junction_6	101795.11777981081	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	154	933	20.0	5629	False	AATAAA	-20
PB.11485.4	chr9	-	2534	1	novel_in_catalog	CDKN2B	novel	3911	2	NA	NA	-36	-788	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	1954	2268	80.0	-4	True	NA	NA
PB.6014.21	chr19	+	2500	15	full-splice_match	HNRNPUL1	ENST00000392006.7	3555	15	197	858	70	-407	multi-exon	FALSE	canonical	1	692087	junction_1	447819.3468111355	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2223	277	2499	25.0	-553	False	NA	NA
PB.9111.1	chr4	+	3318	2	incomplete-splice_match	FRG1	ENST00000514482.1	838	7	-160	14865	-6	-8839	3prime_fragment	FALSE	canonical	1	646367	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	53	162	147	308	90.0	-8	True	NA	NA
PB.6014.20	chr19	+	2981	15	novel_not_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	629362.7337861981	NA	3	NA	TRUE	NA	NA	NA	C	coding	819	2460	126	2585	10.0	1	True	NA	NA
PB.6502.3	chr2	+	2190	11	novel_not_in_catalog	AC012368.1	novel	552	6	NA	NA	37	-3	intron_retention	FALSE	canonical	1	285	junction_7	32163.153965990336	NA	9	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.10415.14	chr7	+	5273	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	4	-382	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	640	3186	30.0	4	True	AATAAA	-14
PB.11934.14	chrM	+	784	1	full-splice_match	MT-CO3	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-7213	False	NA	NA
PB.11934.15	chrM	+	1138	2	antisense		novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-3	True	NA	NA
PB.11934.16	chrM	+	1796	1	full-splice_match	MT-ND4	ENST00000361381.2	1378	1	-290	-128	-290	128	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-3	True	NA	NA
PB.11934.17	chrM	+	1508	1	full-splice_match	MT-ND4	ENST00000361381.2	1378	1	-287	157	-287	-157	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.11934.10	chrM	+	1351	1	full-splice_match	MT-CO1	ENST00000361624.2	1542	1	-3	194	-3	-194	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-9997	False	NA	NA
PB.11934.11	chrM	+	1216	1	full-splice_match	MT-CO1	ENST00000361624.2	1542	1	-3	329	-3	-329	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-9997	False	NA	NA
PB.11934.12	chrM	+	709	1	full-splice_match	MT-CO2	ENST00000361739.1	684	1	0	-25	0	25	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-8834	False	NA	NA
PB.11934.13	chrM	+	841	1	full-splice_match	MT-ATP6	ENST00000361899.2	681	1	-162	2	-162	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-8055	False	NA	NA
PB.5893.23	chr19	+	3322	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	589	-1	any annotated donor/acceptor	FALSE	canonical	1	1805	junction_1	19196.08512822341	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	260	565	20.0	2	True	NA	NA
PB.5893.22	chr19	+	3479	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	587	0	any annotated donor/acceptor	FALSE	canonical	1	1805	junction_1	38307.262774179	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1465	1851	20.0	0	True	NA	NA
PB.5893.21	chr19	+	3440	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	564	-1	any annotated donor/acceptor	FALSE	canonical	1	1805	junction_1	36415.48126398304	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	285	626	20.0	-69	False	NA	NA
PB.5893.20	chr19	+	4227	4	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	560	0	any annotated donor/acceptor	FALSE	canonical	1	1805	junction_1	38991.03174093014	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	289	591	20.0	-73	False	NA	NA
PB.11934.18	chrM	+	1312	1	full-splice_match	MT-ND4	ENST00000361381.2	1378	1	-287	353	-287	-353	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.11934.19	chrM	+	1122	1	full-splice_match	MT-ND4	ENST00000361381.2	1378	1	-287	543	-287	-543	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	NA	NA
PB.11293.3	chr8	-	3948	6	full-splice_match	LRP12	ENST00000424843.6	4092	6	122	22	93	-3	multi-exon	FALSE	canonical	1	35820	junction_5	41711.722541271294	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	6	2528	30.0	355	False	ATTAAA	-19
PB.6920.12	chr2	-	4365	28	full-splice_match	ANKRD44	ENST00000647377.1	7218	28	-77	2930	57	-2117	multi-exon	FALSE	canonical	1	50026	junction_1	39916.89022987816	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	120	3290	55.0	102	False	NA	NA
PB.8954.13	chr4	-	4166	24	novel_not_in_catalog	SEC24D	novel	4030	23	NA	NA	15	-2	any annotated donor/acceptor	FALSE	canonical	1	653	junction_4	143962.80843101782	NA	2	1	TRUE	NA	NA	NA	C	coding	837	2514	258	2771	30.0	2490	False	AATAAA	-17
PB.4337.2	chr16	-	1904	8	novel_in_catalog	TUFM	novel	2071	10	NA	NA	-14	50	intron_retention	FALSE	canonical	1	954077	junction_2	989263.034217175	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	85	867	5.0	-10	True	AGTAAA	-17
PB.4337.3	chr16	-	1762	9	novel_in_catalog	TUFM	novel	2071	10	NA	NA	-18	50	intron_retention	FALSE	canonical	1	954077	junction_2	925540.1242203116	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	89	1129	5.0	-14	True	AGTAAA	-17
PB.4337.1	chr16	-	2015	10	full-splice_match	TUFM	ENST00000313511.7	2071	10	60	-4	-18	4	multi-exon	TRUE	canonical	1	954077	junction_2	873663.5688961713	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	89	1447	25.0	-14	True	NA	NA
PB.4337.4	chr16	-	1603	10	full-splice_match	TUFM	ENST00000313511.7	2071	10	91	377	13	50	multi-exon	FALSE	canonical	1	954077	junction_2	873663.5688961713	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	58	1416	5.0	17	True	AGTAAA	-17
PB.5278.2	chr17	+	2130	3	full-splice_match	SNHG20	ENST00000434411.6	2185	3	54	1	13	-1	multi-exon	FALSE	canonical	1	97899	junction_2	15605.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-68	True	AATAAA	-19
PB.5278.1	chr17	+	2337	2	full-splice_match	SNHG20	ENST00000647734.1	3265	2	971	-43	9	-1	multi-exon	FALSE	canonical	1	97899	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-72	True	AATAAA	-19
PB.333.8	chr1	+	2109	18	full-splice_match	CTPS1	ENST00000498694.2	2855	18	-27	773	-4	-6	multi-exon	FALSE	canonical	1	320551	junction_1	148701.45205190842	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	130	1623	35.0	18	True	TTTAAA	-34
PB.8853.19	chr4	-	4016	25	full-splice_match	SEC31A	ENST00000348405.8	4012	25	-5	1	-5	0	multi-exon	FALSE	canonical	1	315490	junction_13	282463.3282683168	NA	0	NA	TRUE	NA	NA	NA	C	coding	1181	3546	59	3604	20.0	0	True	ATTAAA	-13
PB.8853.18	chr4	-	4305	25	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	27952	junction_24	335128.4957782674	NA	4	NA	TRUE	NA	NA	NA	C	coding	1181	3546	348	3893	20.0	9475	False	ATTAAA	-13
PB.8853.17	chr4	-	4253	28	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	54702	junction_7	378482.77732794004	NA	0	NA	TRUE	NA	NA	NA	C	coding	1236	3711	131	3841	20.0	9355	False	ATTAAA	-13
PB.8853.16	chr4	-	4275	28	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	54702	junction_7	364448.16728815937	NA	0	NA	TRUE	NA	NA	NA	C	coding	1251	3756	108	3863	20.0	-49	True	ATTAAA	-13
PB.8853.15	chr4	-	4285	25	novel_not_in_catalog	SEC31A	novel	1564	8	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	20105	junction_4	330996.47673930245	NA	1	NA	TRUE	NA	NA	NA	C	coding	1005	3018	93	3110	20.0	-34	True	ATTAAA	-13
PB.8563.16	chr3	+	5082	33	novel_not_in_catalog	EIF4G1	novel	5516	33	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_32	806774.481345873	NA	0	NA	TRUE	NA	NA	NA	C	coding	1515	4548	201	4748	15.0	-40	True	ATTAAA	-14
PB.8853.13	chr4	-	4323	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	27952	junction_25	356553.7038654256	NA	2	NA	TRUE	NA	NA	NA	C	coding	1194	3585	327	3911	20.0	9496	False	ATTAAA	-13
PB.8853.12	chr4	-	4306	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	1	27952	junction_26	335078.7373811803	NA	2	NA	TRUE	NA	NA	NA	C	coding	1220	3663	232	3894	20.0	9591	False	ATTAAA	-13
PB.8686.2	chr4	-	1562	2	full-splice_match	MRFAP1L1	ENST00000320848.6	1593	2	-15	46	-15	-46	multi-exon	FALSE	canonical	1	734666	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	267	650	20.0	-31	False	AATAAA	-15
PB.8853.10	chr4	-	4373	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	27952	junction_25	370522.45032813004	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3624	338	3961	20.0	9485	False	ATTAAA	-13
PB.172.28	chr1	-	3432	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	6215	junction_4	339120.8126632159	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	2763	3266	25.0	1	True	ATTAAA	-22
PB.10430.9	chr7	-	5985	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	-9	7201	-8	-143	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	243	1808	5.0	-9	True	AATAAA	-17
PB.10430.4	chr7	-	6035	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	-1	7143	0	-85	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	235	1800	25.0	-1	True	AATAAA	-19
PB.10430.5	chr7	-	6087	11	novel_not_in_catalog	FAM126A	novel	13177	11	NA	NA	0	-11	any annotated donor/acceptor	FALSE	canonical	1	35	junction_6	86713.22108559916	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	723	1778	75.0	-1	True	NA	NA
PB.10430.7	chr7	-	6271	12	full-splice_match	FAM126A	ENST00000409923.5	3130	12	-46	-3095	0	-145	multi-exon	FALSE	canonical	1	113725	junction_2	53141.989402787236	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	235	1494	10.0	-1	True	AATAAA	-15
PB.10430.1	chr7	-	6433	12	full-splice_match	FAM126A	ENST00000409923.5	3130	12	-46	-3257	0	17	multi-exon	FALSE	canonical	1	113725	junction_2	53141.989402787236	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	235	1494	30.0	-1	True	AATAAA	-22
PB.10430.3	chr7	-	5992	10	novel_in_catalog	FAM126A	novel	13177	11	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	1	570	junction_8	87497.75458339376	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	212	1675	45.0	22	True	AATAAA	-2
PB.8563.15	chr3	+	2803	17	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-3	9	combination_of_known_junctions	FALSE	canonical	1	494397	junction_3	728084.0134346512	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2595	208	2802	50.0	-47	True	NA	NA
PB.8490.12	chr3	-	1774	9	novel_in_catalog	VEPH1	novel	3979	13	NA	NA	-36	-163	combination_of_known_junctions	FALSE	canonical	1	2708	junction_8	10052.52204362169	NA	0	NA	TRUE	NA	NA	NA	B	coding	515	1548	165	1712	60.0	NA	False	NA	NA
PB.8490.13	chr3	-	4398	8	novel_not_in_catalog	VEPH1	novel	3979	13	NA	NA	-11	-1670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	11506.913644963755	NA	1	NA	TRUE	NA	NA	NA	B	coding	457	1374	141	1514	40.0	NA	False	NA	NA
PB.8490.10	chr3	-	1906	9	novel_in_catalog	VEPH1	novel	3979	13	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	1	2708	junction_8	10052.52204362169	NA	0	NA	TRUE	NA	NA	NA	B	coding	515	1548	140	1687	85.0	NA	False	AATATA	-13
PB.8490.14	chr3	-	5849	6	incomplete-splice_match	VEPH1	ENST00000392832.6	3044	14	117931	21268	50	-21268	internal_fragment	FALSE	canonical	1	24589	junction_2	4607.528856122336	NA	24	NA	TRUE	NA	NA	NA	B	coding	422	1269	296	1564	60.0	NA	False	NA	NA
PB.8490.15	chr3	-	2564	5	novel_in_catalog	VEPH1	novel	3979	13	NA	NA	-5	47741	combination_of_known_junctions	FALSE	canonical	1	2708	junction_4	13822.970791403706	NA	1	NA	TRUE	NA	NA	NA	B	coding	317	954	134	1087	15.0	NA	False	AATAAA	-38
PB.133.1	chr1	+	1434	8	full-splice_match	MRTO4	ENST00000330263.4	2315	8	17	864	17	525	multi-exon	FALSE	canonical	1	234032	junction_2	190606.20917515372	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	281	1000	85.0	-27	True	NA	NA
PB.4885.2	chr17	-	2114	3	full-splice_match	TEFM	ENST00000580840.1	2109	3	-3	-2	-3	-1	multi-exon	FALSE	canonical	1	97019	junction_1	13209.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	1513	1929	15.0	-4	True	AATAAA	-15
PB.4885.3	chr17	-	2071	3	novel_in_catalog	TEFM	novel	633	2	NA	NA	-2	1	intron_retention	FALSE	canonical	1	6909	junction_1	58264.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	1471	1887	15.0	-3	True	AATAAA	-14
PB.4885.1	chr17	-	1309	4	full-splice_match	TEFM	ENST00000581216.5	1891	4	582	0	-3	0	multi-exon	FALSE	canonical	1	97019	junction_2	13494.30400823498	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	41	1123	15.0	-4	True	AATAAA	-16
PB.7865.5	chr22	+	3494	14	novel_in_catalog	TTC38	novel	630	6	NA	NA	4	-7	intron_retention	FALSE	canonical	1	42763	junction_12	75609.73387016488	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	29	1174	20.0	-8	True	ATTAAA	-16
PB.7865.4	chr22	+	4996	14	novel_in_catalog	TTC38	novel	630	6	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	70306	junction_13	57900.00654730114	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	36	1355	20.0	-15	True	ATTAAA	-21
PB.1415.5	chr10	-	3535	6	full-splice_match	IPMK	ENST00000373935.3	6133	6	-21	2619	-21	-2619	multi-exon	FALSE	canonical	1	18605	junction_3	18694.464117486757	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	513	1595	20.0	-62	False	AATAAA	-16
PB.7865.1	chr22	+	2649	14	novel_not_in_catalog	TTC38	novel	630	6	NA	NA	6	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	93733.77260160918	NA	7	2	TRUE	NA	NA	NA	C	coding	486	1461	71	1531	20.0	-50	False	ATTAAA	-17
PB.7865.3	chr22	+	2588	14	full-splice_match	TTC38	ENST00000381031.7	2610	14	20	2	20	-2	multi-exon	FALSE	canonical	1	182580	junction_2	36936.50117663553	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	57	1466	20.0	0	True	ATTAAA	-21
PB.7865.2	chr22	+	2714	15	novel_in_catalog	TTC38	novel	630	6	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	1	42763	junction_13	73952.0307384925	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	57	1418	20.0	0	True	ATTAAA	-21
PB.11226.50	chr8	-	1738	11	incomplete-splice_match	NBN	ENST00000265433.7	4666	16	51	20119	0	-10096	3prime_fragment	FALSE	canonical	1	198817	junction_9	140189.83661838685	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1632	105	1736	65.0	1	True	AGTAAA	-21
PB.172.26	chr1	-	3870	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	34002	junction_4	313322.4407808813	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	3200	3703	20.0	-17	True	ATTAAA	-23
PB.824.1	chr1	-	4251	13	incomplete-splice_match	CCT3	ENST00000368262.7	2048	15	-55	-45	3	0	intron_retention	FALSE	canonical	1	2751383	junction_8	966817.483523142	NA	3	NA	TRUE	NA	NA	NA	C	coding	499	1500	2522	4021	25.0	-46	True	ATTAAA	-14
PB.824.2	chr1	-	3051	14	incomplete-splice_match	CCT3	ENST00000368262.7	2048	15	-45	-45	0	0	intron_retention	FALSE	canonical	1	6893	junction_13	1491517.8271994165	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	1322	2821	25.0	-36	True	ATTAAA	-14
PB.824.3	chr1	-	1923	14	full-splice_match	CCT3	ENST00000295688.7	2150	14	226	1	6	0	multi-exon	FALSE	canonical	1	2751383	junction_8	967639.183889136	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	56	1693	25.0	17	True	ATTAAA	-14
PB.824.4	chr1	-	2032	15	full-splice_match	CCT3	ENST00000472765.6	1858	15	22	-196	-6	0	multi-exon	FALSE	canonical	1	7071	junction_13	1774637.236639107	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	303	1802	25.0	21	True	ATTAAA	-14
PB.824.5	chr1	-	1875	12	full-splice_match	CCT3	ENST00000368259.6	1815	12	-60	0	0	0	multi-exon	FALSE	canonical	1	26050	junction_10	1580547.076660771	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	125	1645	25.0	-49	True	ATTAAA	-14
PB.824.6	chr1	-	2881	13	novel_in_catalog	CCT3	novel	2150	14	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2751383	junction_8	1002965.6590579954	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	1153	2652	25.0	-34	True	ATTAAA	-13
PB.824.7	chr1	-	1690	14	full-splice_match	CCT3	ENST00000295688.7	2150	14	169	291	-4	-94	multi-exon	FALSE	canonical	1	2751383	junction_8	967639.183889136	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1578	113	1690	55.0	-40	True	NA	NA
PB.824.8	chr1	-	2014	1	novel_in_catalog	CCT3	novel	2150	14	NA	NA	-1	-1178	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-50	True	NA	NA
PB.9283.5	chr5	+	3484	17	full-splice_match	MCCC2	ENST00000340941.10	3665	17	178	3	145	-3	multi-exon	FALSE	canonical	1	329348	junction_6	108975.09615611438	NA	1	1	TRUE	NA	NA	NA	C	coding	515	1548	96	1643	30.0	55	False	AATAAA	-12
PB.172.24	chr1	-	1891	5	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_3	319854.63709707255	NA	1	1	TRUE	NA	NA	NA	C	coding	107	324	234	557	80.0	-17	True	NA	NA
PB.5286.1	chr17	+	1207	4	novel_in_catalog	AFMID	novel	1730	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	66476	junction_3	192438.32990510666	NA	3	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.10200.11	chr6	+	3097	7	novel_in_catalog	NCOA7	novel	5521	17	NA	NA	84	-5	combination_of_known_junctions	FALSE	canonical	1	3647	junction_1	153157.3289014346	NA	1	1	TRUE	NA	NA	NA	C	coding	252	759	4	762	25.0	103	False	AATAAA	-16
PB.9283.4	chr5	+	2111	17	full-splice_match	MCCC2	ENST00000340941.10	3665	17	61	1493	28	-4	multi-exon	FALSE	canonical	1	329348	junction_6	108975.09615611438	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	69	1760	20.0	-2	True	TATAAA	-15
PB.8587.28	chr3	+	2572	11	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-116	intron_retention	FALSE	canonical	1	780423	junction_1	974254.380183102	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	35	1126	25.0	0	True	AATAAA	-17
PB.6847.1	chr2	-	1880	9	novel_in_catalog	CIR1	novel	1921	10	NA	NA	20	-1	no_combination_of_known_junctions	FALSE	canonical	1	165	junction_6	124632.3996664165	NA	1	1	TRUE	NA	NA	NA	B	coding	339	1020	387	1406	10.0	-7	True	AATAAA	-16
PB.11096.1	chr8	-	3846	17	full-splice_match	FGFR1	ENST00000356207.9	3824	17	-19	-3	0	1	multi-exon	FALSE	non_canonical	0	0	junction_9	264942.0699972611	NA	1	NA	TRUE	NA	NA	NA	C	coding	733	2202	744	2945	35.0	-1	True	AATAAA	-20
PB.11096.7	chr8	-	3974	18	full-splice_match	FGFR1	ENST00000447712.6	5900	18	196	1730	-3	-21	multi-exon	FALSE	non_canonical	0	0	junction_9	272820.14071630355	NA	2	1	TRUE	NA	NA	NA	C	coding	822	2469	747	3215	90.0	-4	True	NA	NA
PB.11096.5	chr8	-	4103	18	full-splice_match	FGFR1	ENST00000397091.9	5702	18	6	1593	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	263096.4277487087	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	744	3206	20.0	-1	True	AATAAA	-16
PB.6478.7	chr2	+	3553	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	121	-1786	-63	1737	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	63	1589	35.0	-2	True	AGTAAA	-23
PB.10953.4	chr7	+	4840	23	novel_not_in_catalog	UBE3C	novel	5229	23	NA	NA	16	-8	any annotated donor/acceptor	FALSE	canonical	1	96	junction_1	134782.49417809336	NA	3	NA	TRUE	NA	NA	NA	B	coding	936	2811	421	3231	20.0	-17	True	ATTAAA	-10
PB.10953.5	chr7	+	2268	15	novel_not_in_catalog	UBE3C	novel	5229	23	NA	NA	22	-199	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	156863.703080631	NA	0	NA	TRUE	NA	NA	NA	B	coding	649	1950	280	2229	45.0	-11	True	ATTAAA	-39
PB.10953.6	chr7	+	4727	24	novel_not_in_catalog	UBE3C	novel	5229	23	NA	NA	53	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136299.5356324793	NA	0	NA	TRUE	NA	NA	NA	B	coding	1083	3252	114	3365	25.0	20	True	AATAAA	-19
PB.9667.36	chr5	+	3891	13	incomplete-splice_match	CANX	ENST00000247461.8	4260	15	7350	0	-51	0	5prime_fragment	FALSE	canonical	1	3488323	junction_5	781775.3809939591	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	156	1610	15.0	-3678	False	ATTAAA	-18
PB.9667.31	chr5	+	3953	14	novel_in_catalog	CANX	novel	585	5	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	1631	junction_6	1681988.310014278	NA	6	NA	TRUE	NA	NA	NA	C	coding	327	984	689	1672	15.0	-9291	False	ATTAAA	-18
PB.10953.1	chr7	+	4905	24	novel_not_in_catalog	UBE3C	novel	5229	23	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136299.5356324793	NA	2	1	TRUE	NA	NA	NA	B	coding	1083	3252	294	3545	25.0	-25	True	AATAAA	-17
PB.10953.2	chr7	+	5156	24	novel_not_in_catalog	UBE3C	novel	5229	23	NA	NA	10	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136299.5356324793	NA	0	NA	TRUE	NA	NA	NA	B	coding	1083	3252	291	3542	20.0	-23	True	ATTAAA	-15
PB.10953.3	chr7	+	5020	24	novel_not_in_catalog	UBE3C	novel	5229	23	NA	NA	11	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136299.5356324793	NA	0	NA	TRUE	NA	NA	NA	B	coding	1083	3252	156	3407	25.0	-22	True	ATTAAA	-14
PB.8459.8	chr3	+	3824	17	full-splice_match	HPS3	ENST00000296051.6	4665	17	68	773	13	-2	multi-exon	FALSE	canonical	1	157291	junction_1	44363.01655517803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1004	3015	73	3087	25.0	0	True	AATAAA	-22
PB.6698.1	chr2	+	6569	1	novel_in_catalog	SLC20A1	novel	3381	11	NA	NA	61	-486	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	141	426	912	1337	90.0	2	True	NA	NA
PB.6698.2	chr2	+	3168	11	novel_in_catalog	SLC20A1	novel	3381	11	NA	NA	81	-4	combination_of_known_junctions	TRUE	canonical	1	11665	junction_6	286540.1338745412	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	459	2372	25.0	-1	True	AATAAA	-19
PB.6698.3	chr2	+	3352	12	novel_in_catalog	SLC20A1	novel	3381	11	NA	NA	82	-4	combination_of_known_junctions	FALSE	canonical	1	37343	junction_6	313941.8319317995	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	1276	2556	25.0	0	True	AATAAA	-19
PB.6698.4	chr2	+	3150	11	full-splice_match	SLC20A1	ENST00000272542.7	3381	11	225	6	225	-4	multi-exon	FALSE	canonical	1	400289	junction_5	192619.79645667263	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	315	2354	25.0	-9178	False	AATAAA	-19
PB.10906.5	chr7	-	2390	18	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-2	6	no_combination_of_known_junctions	FALSE	canonical	1	8385	junction_17	134994.1426293318	NA	1	NA	TRUE	NA	NA	NA	C	coding	637	1914	208	2121	30.0	1	True	AATAAA	-24
PB.6698.6	chr2	+	3328	12	novel_not_in_catalog	SLC20A1	novel	3381	11	NA	NA	83	-4	any annotated donor/acceptor	FALSE	canonical	1	5134	junction_4	335775.6389875845	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	1132	2532	25.0	1	True	AATAAA	-19
PB.6698.7	chr2	+	3143	11	novel_in_catalog	SLC20A1	novel	3381	11	NA	NA	83	-4	combination_of_known_junctions	FALSE	canonical	1	7863	junction_6	287425.2680537325	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	1574	2347	25.0	1	True	AATAAA	-19
PB.6698.8	chr2	+	5765	4	incomplete-splice_match	SLC20A1	ENST00000272542.7	3381	11	83	11341	83	-486	3prime_fragment	FALSE	canonical	1	600994	junction_1	45127.984195569334	NA	5	NA	TRUE	NA	NA	NA	C	coding	217	654	457	1110	90.0	1	True	NA	NA
PB.6698.9	chr2	+	2550	9	novel_in_catalog	SLC20A1	novel	3381	11	NA	NA	83	-5	no_combination_of_known_junctions	FALSE	canonical	1	2539	junction_1	325222.60130695003	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	193	1755	25.0	1	True	AATAAA	-18
PB.1288.2	chr10	+	2368	6	novel_in_catalog	GATA3	novel	748	2	NA	NA	-16	-394	combination_of_known_junctions	FALSE	canonical	1	9656	junction_1	162956.34275228443	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	561	1895	85.0	-5157	False	NA	NA
PB.1288.3	chr10	+	2408	6	full-splice_match	GATA3	ENST00000645492.1	2779	6	-27	398	8	-394	multi-exon	FALSE	canonical	1	250293	junction_3	95081.77730438153	NA	2	NA	TRUE	NA	NA	NA	C	coding	444	1335	601	1935	85.0	-9669	False	NA	NA
PB.8587.29	chr3	+	5330	4	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	780423	junction_1	789334.5355057005	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-15
PB.1288.1	chr10	+	2315	6	novel_in_catalog	GATA3	novel	748	2	NA	NA	-3	-394	combination_of_known_junctions	FALSE	canonical	1	8681	junction_1	186022.66649846733	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	511	1842	85.0	-3	True	NA	NA
PB.2686.9	chr12	-	2905	8	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-11	1	intron_retention	FALSE	canonical	1	7821610	junction_7	1297624.7014847347	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	1984	2760	15.0	-96	False	AATAAA	-15
PB.3577.7	chr14	+	4740	32	novel_in_catalog	FLVCR2	novel	218	2	NA	NA	20742	291864	no_combination_of_known_junctions	FALSE	canonical	1	25602	junction_1	36347.11540133438	NA	2	NA	TRUE	NA	NA	NA	C	coding	1278	3837	272	4108	5.0	0	True	AATAAA	-15
PB.2686.5	chr12	-	2588	8	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-11	2	intron_retention	FALSE	canonical	1	6266525	junction_7	1965761.5495542998	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	1666	2442	15.0	-12	False	AATAAA	-16
PB.2686.4	chr12	-	3000	8	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	6266525	junction_7	1968232.4604710487	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	22	900	15.0	-1	True	AATAAA	-16
PB.2686.7	chr12	-	2171	8	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-26	2	intron_retention	FALSE	canonical	1	81301	junction_7	3853815.152104645	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	1249	2025	15.0	-27	False	AATAAA	-16
PB.2686.6	chr12	-	2328	9	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	6266525	junction_8	1842686.8280545531	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	1406	2182	15.0	-1	True	AATAAA	-16
PB.2686.1	chr12	-	3947	5	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	10219890	junction_3	737894.7293531697	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	2353	2955	15.0	-1	True	AATAAA	-16
PB.2686.3	chr12	-	3359	6	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	10136093	junction_2	796413.5905080978	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	2437	3213	15.0	-85	False	AATAAA	-16
PB.2686.2	chr12	-	3709	6	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-11	2	intron_retention	FALSE	canonical	1	10219890	junction_3	771617.8366594178	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	1067	1609	15.0	-12	False	AATAAA	-16
PB.7684.23	chr22	+	5824	14	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	152248	junction_4	730417.164584149	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	30	1007	10.0	-4072	False	ATTAAA	-15
PB.5681.1	chr19	-	3606	6	full-splice_match	ZNF699	ENST00000591998.5	3358	6	-263	15	2	-15	multi-exon	FALSE	canonical	1	21739	junction_2	3799.426240894801	NA	0	NA	TRUE	NA	NA	NA	A	coding	642	1929	493	2421	80.0	-21	True	NA	NA
PB.4478.10	chr16	+	2926	12	full-splice_match	CES2	ENST00000317091.8	3927	12	29	972	14	154	multi-exon	FALSE	canonical	1	273373	junction_1	79793.39182347254	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	956	2827	20.0	5	True	NA	NA
PB.4478.11	chr16	+	3825	11	novel_in_catalog	CES2	novel	3868	12	NA	NA	19	91	intron_retention	FALSE	canonical	1	9569	junction_1	143885.51065635483	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	1586	2803	80.0	10	True	AGTAAA	-11
PB.12311.2	chrX	+	3500	5	full-splice_match	HMGB3	ENST00000325307.11	3560	5	51	9	-48	-9	multi-exon	FALSE	canonical	1	77909	junction_1	123867.54244554946	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	46	648	40.0	2	True	AATAAA	-21
PB.12311.1	chrX	+	1550	5	full-splice_match	HMGB3	ENST00000325307.11	3560	5	0	2010	0	833	multi-exon	FALSE	canonical	1	77909	junction_1	123867.54244554946	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	97	699	40.0	4	True	AATAAA	-16
PB.7684.21	chr22	+	6435	15	novel_in_catalog	EWSR1	novel	560	5	NA	NA	3	-3	intron_retention	FALSE	canonical	1	19427	junction_3	745103.1560704894	NA	2	NA	TRUE	NA	NA	NA	C	coding	317	954	5310	6263	10.0	26	True	ATTAAA	-13
PB.8430.7	chr3	-	3674	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	89	-403	-3	403	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	94	2814	25.0	-1	True	AATAAA	-31
PB.7684.20	chr22	+	2138	17	novel_in_catalog	EWSR1	novel	560	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	106424	junction_8	722573.0255536865	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	45	1964	10.0	25	True	ATTAAA	-15
PB.9352.9	chr5	+	3862	6	incomplete-splice_match	RHOBTB3	ENST00000379982.7	5537	12	169	38131	169	2143	3prime_fragment	FALSE	canonical	1	368617	junction_1	66547.55850247252	NA	4	1	TRUE	NA	NA	NA	C	coding	366	1101	340	1440	80.0	8	True	AATACA	-10
PB.3764.3	chr15	+	3136	5	full-splice_match	SPRED1	ENST00000561205.1	1177	5	-510	-1449	12	1449	multi-exon	FALSE	canonical	1	13545	junction_4	69931.43541131914	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	2	607	20.0	23	True	NA	NA
PB.3764.2	chr15	+	2580	7	full-splice_match	SPRED1	ENST00000299084.8	7780	7	489	4711	-33	-4711	multi-exon	FALSE	canonical	1	153903	junction_2	21951.838987125127	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	372	1706	45.0	-36	True	AGTAAA	-12
PB.3764.1	chr15	+	4069	7	full-splice_match	SPRED1	ENST00000299084.8	7780	7	511	3200	-11	-3200	multi-exon	FALSE	canonical	1	153903	junction_2	21951.838987125127	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	350	1684	25.0	-14	True	ATTAAA	-14
PB.3764.7	chr15	+	3353	4	incomplete-splice_match	SPRED1	ENST00000299084.8	7780	7	72426	3202	71571	-3202	5prime_fragment	FALSE	canonical	1	174088	junction_1	19357.9204174645	NA	5	1	TRUE	NA	NA	NA	C	coding	257	774	197	970	25.0	7978	False	ATTAAA	-12
PB.1097.2	chr1	-	4280	2	full-splice_match	C1orf74	ENST00000294811.2	4684	2	-8	412	-8	-412	multi-exon	FALSE	canonical	1	56991	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	266	1075	30.0	-13	True	AATAAA	-21
PB.3764.5	chr15	+	3806	7	novel_not_in_catalog	SPRED1	novel	7780	7	NA	NA	1606	-3199	any annotated donor/acceptor	FALSE	canonical	1	1468	junction_1	71862.91952680929	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	149	1420	20.0	0	True	ATTAAA	-15
PB.3764.4	chr15	+	3877	6	novel_in_catalog	SPRED1	novel	7780	7	NA	NA	17	-3189	no_combination_of_known_junctions	FALSE	canonical	1	1287	junction_1	78791.72786784156	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	369	1481	20.0	-1922	False	ATTAAA	-25
PB.1097.3	chr1	-	3057	2	full-splice_match	C1orf74	ENST00000294811.2	4684	2	4	1623	4	-1623	multi-exon	FALSE	canonical	1	56991	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	254	1063	50.0	-1	True	ATTAAA	-26
PB.7684.25	chr22	+	1841	8	full-splice_match	EWSR1	ENST00000483415.5	3231	8	-2	1392	-2	940	multi-exon	FALSE	canonical	1	152248	junction_4	228676.0499750774	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	27	1004	70.0	-4069	False	TATAAA	-6
PB.11806.3	chr9	+	2767	4	novel_in_catalog	CDK9	novel	702	3	NA	NA	-4	-681	intron_retention	FALSE	canonical	1	679436	junction_1	103784.983744706	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	105	413	5.0	11	True	ATTAAA	-44
PB.10324.1	chr6	+	5291	1	antisense	novelGene_TBXT_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	B	coding	75	228	112	339	60.0	-2	True	AATAAA	-12
PB.10324.2	chr6	+	3153	1	antisense	novelGene_TBXT_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	136	411	991	1401	40.0	98	False	ATTAAA	-30
PB.7684.24	chr22	+	2172	17	full-splice_match	EWSR1	ENST00000406548.5	2207	17	36	-1	-4	1	multi-exon	FALSE	canonical	1	152248	junction_4	705107.5674304257	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	29	1996	5.0	-4071	False	ATTAAA	-17
PB.10324.4	chr6	+	3135	2	antisense	novelGene_TBXT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	877	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	62	189	199	387	10.0	-1	True	TATAAA	-28
PB.10324.5	chr6	+	3077	1	antisense	novelGene_TBXT_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	75	228	111	338	20.0	-1	True	NA	NA
PB.10324.6	chr6	+	3339	2	antisense	novelGene_TBXT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	877	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	62	189	198	386	40.0	0	True	ATTAAA	-30
PB.598.5	chr1	+	4062	16	novel_in_catalog	AMPD2	novel	572	5	NA	NA	2	0	intron_retention	FALSE	canonical	1	135165	junction_1	118948.6513239875	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	2101	3165	20.0	12	True	AATAAA	-13
PB.3368.12	chr14	+	2306	12	full-splice_match	COCH	ENST00000396618.8	2571	12	35	230	0	-228	multi-exon	FALSE	canonical	1	53060	junction_1	86861.99121576101	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	57	1709	40.0	0	True	ACTAAA	-12
PB.3368.11	chr14	+	2204	11	full-splice_match	COCH	ENST00000644874.1	2884	11	197	483	-13	35	multi-exon	FALSE	canonical	1	105592	junction_2	72693.03736019014	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	208	1860	35.0	-4695	False	AATAAA	-20
PB.3368.10	chr14	+	3955	6	novel_in_catalog	COCH	novel	2582	11	NA	NA	0	478	intron_retention	FALSE	canonical	1	148466	junction_1	57740.60915300426	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	2879	3493	95.0	0	True	NA	NA
PB.9298.4	chr5	-	5258	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	4	-2108	-4	-41	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	423	2219	50.0	-8	True	AATAAA	-21
PB.8735.6	chr4	-	3347	3	novel_in_catalog	TLR1	novel	619	4	NA	NA	-163	9	no_combination_of_known_junctions	FALSE	canonical	1	453	junction_2	22264.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	790	3150	45.0	-2	True	ATTAAA	-29
PB.8176.1	chr3	-	7021	10	novel_in_catalog	AC006254.1	novel	5640	24	NA	NA	-61858	-3241	intron_retention	FALSE	canonical	1	101003	junction_9	95149.8999101606	NA	5	NA	TRUE	NA	NA	NA	A	coding	294	885	138	1022	15.0	-40	True	AATAAA	-28
PB.12037.10	chrX	+	5244	29	full-splice_match	KDM6A	ENST00000377967.8	5438	29	-323	517	11	423	multi-exon	FALSE	canonical	1	68832	junction_13	49571.2030772326	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	437	4570	45.0	0	True	TATAAA	-18
PB.8176.3	chr3	-	4785	8	full-splice_match	STIMATE	ENST00000355083.9	4769	8	-2	-14	-2	14	multi-exon	FALSE	canonical	1	101003	junction_7	44202.4924502717	NA	3	NA	TRUE	NA	NA	NA	C	coding	294	885	149	1033	55.0	-51	True	AATAAA	-28
PB.8176.2	chr3	-	4843	9	novel_in_catalog	TMEM110-MUSTN1	novel	5280	4	NA	NA	-16	-3592	no_combination_of_known_junctions	FALSE	canonical	1	5881	junction_8	83334.7558525253	NA	3	NA	TRUE	NA	NA	NA	A	coding	214	645	447	1091	55.0	-31	True	AATAAA	-28
PB.8176.7	chr3	-	1643	8	full-splice_match	STIMATE	ENST00000355083.9	4769	8	-2	3128	-2	334	multi-exon	FALSE	canonical	1	101003	junction_7	44202.4924502717	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	149	1033	20.0	-51	True	AAAACA	-20
PB.8176.6	chr3	-	3919	8	full-splice_match	STIMATE	ENST00000355083.9	4769	8	6	844	6	-844	multi-exon	FALSE	canonical	1	101003	junction_7	44202.4924502717	NA	3	NA	TRUE	NA	NA	NA	C	coding	294	885	141	1025	20.0	-43	True	AATAAA	-32
PB.11307.1	chr8	-	4121	13	novel_in_catalog	RAD21	novel	3749	14	NA	NA	80	0	intron_retention	FALSE	canonical	1	430119	junction_12	395222.71766780084	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	209	1570	25.0	-11	True	AATAAA	-19
PB.11806.4	chr9	+	2953	5	novel_in_catalog	CDK9	novel	702	3	NA	NA	2	-4	intron_retention	FALSE	canonical	1	679436	junction_1	118643.55843555098	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	1249	1713	45.0	17	True	AGTAAA	-7
PB.10121.12	chr6	-	4311	7	incomplete-splice_match	FBXL4	ENST00000369244.6	8035	10	-24	28189	-24	-23002	3prime_fragment	FALSE	canonical	1	33036	junction_6	49115.10236395952	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	676	1881	20.0	-6	True	AATAAA	-23
PB.10121.11	chr6	-	3121	9	incomplete-splice_match	FBXL4	ENST00000369244.6	8035	10	-57	5944	23	-757	3prime_fragment	FALSE	canonical	1	33036	junction_8	45145.52793588059	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	709	2340	10.0	-39	True	TATAAA	-11
PB.10121.10	chr6	-	2398	9	full-splice_match	FBXL4	ENST00000229971.2	2810	9	20	392	20	-392	multi-exon	FALSE	canonical	1	20749	junction_8	46265.474723160194	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	462	2237	50.0	-42	True	ATTAAA	-17
PB.221.1	chr1	-	2421	2	full-splice_match	PTAFR	ENST00000373857.7	4491	2	-117	2187	-117	320	multi-exon	FALSE	canonical	1	123695	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	342	1029	753	1781	100.0	54	False	NA	NA
PB.11149.4	chr8	+	3122	7	full-splice_match	RAB2A	ENST00000529579.5	680	7	-243	-2199	2	-533	multi-exon	FALSE	canonical	1	16126	junction_5	555510.7253851331	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	271	816	50.0	2	True	AATAAA	-23
PB.3040.8	chr13	+	4769	26	full-splice_match	ZMYM2	ENST00000382871.3	5051	26	17	265	17	-210	multi-exon	FALSE	canonical	1	43283	junction_1	154958.05214250207	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	169	4302	15.0	-224	False	AATAAA	-10
PB.3040.9	chr13	+	5094	26	full-splice_match	ZMYM2	ENST00000382871.3	5051	26	-98	55	8	0	multi-exon	FALSE	canonical	1	43283	junction_1	154958.05214250207	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	284	4417	5.0	-10	True	ATTAAA	-16
PB.3040.2	chr13	+	4723	25	full-splice_match	ZMYM2	ENST00000610343.4	10200	25	129	5348	16	-210	multi-exon	FALSE	canonical	1	43283	junction_1	133885.86401948135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	123	4256	15.0	-225	False	AATAAA	-10
PB.3040.3	chr13	+	4517	26	novel_in_catalog	ZMYM2	novel	10200	25	NA	NA	-36	-207	combination_of_known_junctions	FALSE	canonical	1	43283	junction_1	137301.6261447766	NA	0	NA	TRUE	NA	NA	NA	C	coding	1290	3873	175	4047	5.0	-277	False	AATAAA	-13
PB.893.1	chr1	+	1728	14	full-splice_match	NUF2	ENST00000367900.7	1842	14	20	94	1	-57	multi-exon	FALSE	canonical	1	42758	junction_1	74609.55148880702	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	133	1527	15.0	-52	True	ATTAAA	-16
PB.3040.1	chr13	+	5064	25	full-splice_match	ZMYM2	ENST00000610343.4	10200	25	2	5134	2	4	multi-exon	FALSE	canonical	1	43283	junction_1	133885.86401948135	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	250	4383	15.0	-23	True	ATTAAA	-20
PB.3040.6	chr13	+	4770	26	novel_in_catalog	ZMYM2	novel	10200	25	NA	NA	24	-24	combination_of_known_junctions	FALSE	canonical	1	43283	junction_1	137301.6261447766	NA	0	NA	TRUE	NA	NA	NA	C	coding	1290	3873	190	4062	70.0	5	True	NA	NA
PB.3040.7	chr13	+	2704	12	incomplete-splice_match	ZMYM2	ENST00000610343.4	10200	25	5	54754	-2	5696	3prime_fragment	FALSE	canonical	1	43283	junction_1	111525.67030638845	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	247	2661	25.0	-20	True	ATTAAA	-27
PB.3040.4	chr13	+	2167	7	incomplete-splice_match	ZMYM2	ENST00000610343.4	10200	25	3	71876	3	-10	3prime_fragment	FALSE	canonical	1	43283	junction_1	124433.50015804962	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	249	1898	50.0	-22	True	TATAAA	-32
PB.3040.5	chr13	+	4848	27	novel_in_catalog	ZMYM2	novel	10200	25	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	1	43283	junction_1	156212.57708284535	NA	0	NA	TRUE	NA	NA	NA	C	coding	1290	3873	295	4167	15.0	-21	True	ATTAAA	-20
PB.11375.6	chr8	+	1715	11	full-splice_match	GSDMD	ENST00000262580.8	1762	11	44	3	-3	0	multi-exon	FALSE	canonical	1	316336	junction_1	94670.85719375314	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	106	1560	30.0	-3	True	AATAAA	-16
PB.3550.18	chr14	+	2161	11	full-splice_match	ZNF410	ENST00000540593.5	1722	11	243	-682	1	1	multi-exon	FALSE	canonical	1	3402	junction_3	137528.6071643278	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	206	1423	5.0	1	True	AATAAA	-18
PB.3550.19	chr14	+	2055	11	full-splice_match	ZNF410	ENST00000324593.10	2293	11	55	183	1	-152	multi-exon	FALSE	canonical	1	106590	junction_9	113759.07948133195	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	206	1501	15.0	1	True	AATAAA	-15
PB.3550.16	chr14	+	2568	13	novel_not_in_catalog	AC005520.1	novel	3695	22	NA	NA	34889	-1	any annotated donor/acceptor	FALSE	canonical	1	1565	junction_6	157226.91312425915	NA	0	NA	TRUE	NA	NA	NA	B	coding	290	873	960	1832	5.0	1	True	AATAAA	-16
PB.3550.17	chr14	+	2214	13	novel_not_in_catalog	AC005520.1	novel	3695	22	NA	NA	34889	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	130755.25035783034	NA	0	NA	TRUE	NA	NA	NA	B	coding	478	1437	206	1642	5.0	1	True	AATAAA	-18
PB.3550.14	chr14	+	2279	12	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34887	-1	no_combination_of_known_junctions	FALSE	canonical	1	15741	junction_2	132466.8429354654	NA	0	NA	TRUE	NA	NA	NA	B	coding	425	1278	266	1543	5.0	-1	True	AATAAA	-16
PB.3550.15	chr14	+	2030	13	novel_not_in_catalog	AC005520.1	novel	3695	22	NA	NA	34887	-185	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	130755.25035783034	NA	0	NA	TRUE	NA	NA	NA	B	coding	478	1437	208	1644	10.0	-1	True	AATAAA	-13
PB.3550.12	chr14	+	2352	12	full-splice_match	ZNF410	ENST00000556396.5	1961	12	48	-439	-3	1	multi-exon	FALSE	canonical	1	18356	junction_3	132201.25487439078	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	985	1614	5.0	-3	True	AATAAA	-18
PB.3550.13	chr14	+	2352	12	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34886	-1	no_combination_of_known_junctions	FALSE	canonical	1	11283	junction_6	128274.37022812269	NA	0	NA	TRUE	NA	NA	NA	B	coding	272	819	209	1027	5.0	-2	True	AATAAA	-16
PB.3550.10	chr14	+	2480	13	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34879	-1	no_combination_of_known_junctions	FALSE	canonical	1	12913	junction_1	156428.86955229755	NA	0	NA	TRUE	NA	NA	NA	B	coding	478	1437	308	1744	5.0	-9	True	AATAAA	-16
PB.3550.11	chr14	+	2000	13	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34885	-501	no_combination_of_known_junctions	FALSE	canonical	1	2440	junction_11	156276.9020590935	NA	0	NA	TRUE	NA	NA	NA	B	coding	499	1500	210	1709	25.0	-3	True	AATGAA	-31
PB.10071.1	chr6	-	3781	24	novel_not_in_catalog	PHIP	novel	10460	40	NA	NA	-19031	-26	any annotated donor/acceptor	FALSE	canonical	1	40376	junction_21	87518.63855921765	NA	0	NA	TRUE	NA	NA	NA	B	coding	1200	3603	58	3660	100.0	NA	False	NA	NA
PB.10071.7	chr6	-	2917	24	novel_not_in_catalog	PHIP	novel	10460	40	NA	NA	0	-42424	any annotated donor/acceptor	FALSE	canonical	1	44297	junction_9	88343.54831630498	NA	0	NA	TRUE	NA	NA	NA	B	coding	530	1593	169	1761	75.0	17	False	NA	NA
PB.10071.6	chr6	-	2806	23	incomplete-splice_match	PHIP	ENST00000275034.4	10460	40	24	47126	24	-42447	3prime_fragment	FALSE	canonical	1	167249	junction_21	69467.1114962337	NA	0	NA	TRUE	NA	NA	NA	B	coding	887	2661	145	2805	70.0	6	True	NA	NA
PB.10071.9	chr6	-	2341	19	incomplete-splice_match	PHIP	ENST00000275034.4	10460	40	-56	61631	-56	-56952	3prime_fragment	FALSE	canonical	1	167249	junction_17	46758.86964955762	NA	0	NA	TRUE	NA	NA	NA	B	coding	705	2115	225	2339	50.0	-39	False	NA	NA
PB.10071.8	chr6	-	2399	20	incomplete-splice_match	PHIP	ENST00000275034.4	10460	40	0	55089	0	-50410	3prime_fragment	FALSE	canonical	1	167249	junction_18	52871.08279202449	NA	0	NA	TRUE	NA	NA	NA	B	coding	743	2229	169	2397	60.0	17	False	NA	NA
PB.10087.4	chr6	-	4509	27	full-splice_match	CEP162	ENST00000403245.7	5156	27	-29	676	-29	38	multi-exon	FALSE	canonical	1	27984	junction_26	17539.787275003277	NA	0	NA	TRUE	NA	NA	NA	C	coding	1403	4212	145	4356	75.0	-50	False	AATAAA	-13
PB.10087.5	chr6	-	3446	23	incomplete-splice_match	CEP162	ENST00000403245.7	5156	27	-44	28646	-44	21885	3prime_fragment	FALSE	canonical	1	27984	junction_22	13905.400887234813	NA	1	NA	TRUE	NA	NA	NA	C	coding	1095	3285	160	3444	70.0	-65	False	AATGAA	-12
PB.10087.2	chr6	-	5167	27	full-splice_match	CEP162	ENST00000403245.7	5156	27	-21	10	-21	-9	multi-exon	FALSE	canonical	1	27984	junction_26	17539.787275003277	NA	0	NA	TRUE	NA	NA	NA	C	coding	1403	4212	137	4348	30.0	-42	False	NA	NA
PB.10087.3	chr6	-	4574	28	novel_in_catalog	CEP162	novel	4165	18	NA	NA	0	38	combination_of_known_junctions	FALSE	canonical	1	8750	junction_24	20476.73288854332	NA	0	NA	TRUE	NA	NA	NA	C	coding	1327	3984	438	4421	75.0	-3	True	AATAAA	-13
PB.10087.1	chr6	-	5352	27	full-splice_match	CEP162	ENST00000403245.7	5156	27	22	-218	4	218	multi-exon	FALSE	canonical	1	27984	junction_26	17539.787275003277	NA	2	NA	TRUE	NA	NA	NA	C	coding	1403	4212	94	4305	30.0	1	True	NA	NA
PB.5488.4	chr18	+	5406	8	full-splice_match	C18orf54	ENST00000382911.8	4056	8	-634	-716	34	716	multi-exon	FALSE	canonical	1	30908	junction_3	9603.233173663706	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	967	2568	30.0	-2	True	ATTAAA	-17
PB.776.8	chr1	-	3491	1	novel_in_catalog	C1orf43	novel	1861	8	NA	NA	0	-4996	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	17	True	NA	NA
PB.776.9	chr1	-	2966	1	genic	C1orf43	novel	NA	NA	NA	NA	-16	-5555	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	821	False	NA	NA
PB.5488.1	chr18	+	6402	8	full-splice_match	C18orf54	ENST00000382911.8	4056	8	-682	-1664	-14	0	multi-exon	FALSE	canonical	1	30908	junction_3	9603.233173663706	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	1015	2616	25.0	-50	True	TATAAA	-38
PB.5488.2	chr18	+	4910	8	full-splice_match	C18orf54	ENST00000648616.1	2096	8	-575	-2239	-10	716	multi-exon	FALSE	canonical	1	21172	junction_3	12274.490735518379	NA	7	NA	TRUE	NA	NA	NA	C	coding	353	1062	1011	2072	30.0	-46	True	ATTAAA	-17
PB.5488.3	chr18	+	5850	8	full-splice_match	C18orf54	ENST00000648616.1	2096	8	-567	-3187	-2	0	multi-exon	FALSE	canonical	1	21172	junction_3	12274.490735518379	NA	4	NA	TRUE	NA	NA	NA	C	coding	353	1062	1003	2064	25.0	-38	True	TATAAA	-38
PB.776.2	chr1	-	1566	6	full-splice_match	C1orf43	ENST00000350592.7	1610	6	46	-2	0	2	multi-exon	FALSE	canonical	1	613491	junction_5	773515.1799755193	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	172	831	30.0	-3	True	AATAAA	-24
PB.776.3	chr1	-	1523	5	full-splice_match	C1orf43	ENST00000362076.8	1551	5	40	-12	-1	-2	multi-exon	FALSE	canonical	1	248969	junction_3	1132128.7713856527	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	173	778	15.0	-4	True	AATAAA	-34
PB.776.1	chr1	-	1671	7	full-splice_match	C1orf43	ENST00000368521.9	1708	7	37	0	9	0	multi-exon	FALSE	canonical	1	1269532	junction_5	533090.3453483128	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	163	924	20.0	6	True	AATAAA	-36
PB.776.6	chr1	-	1612	7	full-splice_match	C1orf43	ENST00000368521.9	1708	7	-31	127	0	-113	multi-exon	FALSE	canonical	1	1269532	junction_5	533090.3453483128	NA	3	NA	TRUE	NA	NA	NA	C	coding	253	762	231	992	30.0	-1	True	AATAAA	-30
PB.776.7	chr1	-	1179	6	full-splice_match	C1orf43	ENST00000368518.5	1278	6	-41	140	4	-140	multi-exon	FALSE	canonical	1	1269532	junction_4	570648.8540868544	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	168	737	90.0	1	True	NA	NA
PB.776.4	chr1	-	1704	6	full-splice_match	C1orf43	ENST00000368519.5	1163	6	-93	-448	-41	-8	multi-exon	FALSE	canonical	1	248969	junction_3	921126.5116155543	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	272	979	55.0	2	True	AATAAA	-14
PB.776.5	chr1	-	1570	7	novel_not_in_catalog	C1orf43	novel	1760	8	NA	NA	9	-10	any annotated donor/acceptor	FALSE	canonical	1	37028	junction_6	941911.8923749361	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	191	847	50.0	6	True	AATAAA	-12
PB.10759.4	chr7	-	2308	5	full-splice_match	NAPEPLD	ENST00000465647.5	2380	5	58	14	-39	0	multi-exon	FALSE	canonical	1	50306	junction_4	24604.431891175624	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	222	1403	90.0	-7	True	NA	NA
PB.10759.5	chr7	-	2149	5	full-splice_match	NAPEPLD	ENST00000427257.5	1822	5	236	-563	-89	0	multi-exon	FALSE	canonical	1	8714	junction_4	41025.65994213256	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	63	1244	90.0	-3	True	NA	NA
PB.10759.2	chr7	-	5147	5	full-splice_match	NAPEPLD	ENST00000427257.5	1822	5	-22	-3303	-22	-6	multi-exon	FALSE	canonical	1	8714	junction_4	41025.65994213256	NA	4	NA	TRUE	NA	NA	NA	C	coding	466	1401	102	1502	50.0	-261	False	AATAAA	-14
PB.10759.3	chr7	-	5122	5	full-splice_match	NAPEPLD	ENST00000465647.5	2380	5	-16	-2726	10	-6	multi-exon	FALSE	canonical	1	50306	junction_4	24604.431891175624	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	296	1477	50.0	9	True	AATAAA	-14
PB.10977.5	chr8	-	4593	2	novel_not_in_catalog	PPP1R3B	novel	5548	2	NA	NA	12	-951	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	151	1005	20.0	-6	True	AATAAA	-28
PB.460.1	chr1	-	3577	1	genic	WDR78	novel	NA	NA	NA	NA	-332	-16784	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	163	False	ATTAAA	-18
PB.6603.8	chr2	-	3158	6	novel_not_in_catalog	POLR1A	novel	12749	34	NA	NA	0	-3158	any annotated donor/acceptor	FALSE	canonical	1	436	junction_3	71002.26465571362	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	99	569	75.0	0	True	NA	NA
PB.11425.9	chr9	+	5156	5	full-splice_match	SMARCA2	ENST00000637103.1	5657	5	67	434	1	-266	multi-exon	FALSE	canonical	1	9842	junction_4	159700.31840059054	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	121	960	55.0	1	True	TATAAA	-34
PB.460.2	chr1	-	2376	1	genic	WDR78	novel	NA	NA	NA	NA	-309	-17962	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	186	False	NA	NA
PB.11425.5	chr9	+	3115	5	full-splice_match	SMARCA2	ENST00000637103.1	5657	5	66	2476	0	759	multi-exon	FALSE	canonical	1	9842	junction_4	159700.31840059054	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	122	961	35.0	0	True	AATAAA	-18
PB.11425.4	chr9	+	5580	5	full-splice_match	SMARCA2	ENST00000637103.1	5657	5	64	13	-2	-13	multi-exon	FALSE	canonical	1	9842	junction_4	159700.31840059054	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	124	963	20.0	-2	True	AATAAA	-23
PB.11425.7	chr9	+	1384	4	full-splice_match	SMARCA2	ENST00000636559.1	6853	4	1	5468	1	544	multi-exon	FALSE	canonical	1	152319	junction_1	109323.62918214688	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	121	933	75.0	1	True	NA	NA
PB.11425.6	chr9	+	2167	5	full-splice_match	SMARCA2	ENST00000637103.1	5657	5	66	3424	0	-189	multi-exon	FALSE	canonical	1	9842	junction_4	159700.31840059054	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	122	961	15.0	0	True	AATAAA	-23
PB.11425.1	chr9	+	7062	4	full-splice_match	SMARCA2	ENST00000636559.1	6853	4	-54	-155	5	-13	multi-exon	FALSE	canonical	1	152319	junction_1	109323.62918214688	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	176	988	20.0	-2428	False	AATAAA	-23
PB.11425.3	chr9	+	3788	2	incomplete-splice_match	SMARCA2	ENST00000634536.1	556	3	-2	474	-2	-474	3prime_fragment	FALSE	canonical	1	152319	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	3309	3692	80.0	-2	True	NA	NA
PB.11425.2	chr9	+	3596	4	full-splice_match	SMARCA2	ENST00000636559.1	6853	4	1	3256	1	-189	multi-exon	FALSE	canonical	1	152319	junction_1	109323.62918214688	NA	6	NA	TRUE	NA	NA	NA	C	coding	270	813	121	933	15.0	1	True	AATAAA	-23
PB.8053.7	chr3	+	3325	11	full-splice_match	TCAIM	ENST00000412611.6	3306	11	-23	4	-18	-4	multi-exon	FALSE	canonical	1	60498	junction_4	42454.464960590434	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	502	1560	15.0	-32	True	AATAAA	-16
PB.8053.6	chr3	+	3369	11	full-splice_match	TCAIM	ENST00000342649.8	3687	11	314	4	6	-4	multi-exon	FALSE	canonical	1	49905	junction_4	44127.74312107974	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	114	1604	15.0	0	True	AATAAA	-16
PB.8053.5	chr3	+	1905	4	full-splice_match	TCAIM	ENST00000396078.7	2178	4	282	-9	-18	7	multi-exon	FALSE	canonical	1	134212	junction_1	44105.64775122972	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-32	True	NA	NA
PB.8053.4	chr3	+	2882	1	novel_in_catalog	TCAIM	novel	1998	4	NA	NA	0	216	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-6	True	AATAAA	-17
PB.8053.3	chr3	+	3509	11	full-splice_match	TCAIM	ENST00000417237.5	1844	11	-8	-1657	-8	-4	multi-exon	FALSE	canonical	1	49905	junction_4	46235.050532685695	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	254	1744	15.0	-685	False	AATAAA	-16
PB.8053.2	chr3	+	3434	11	novel_in_catalog	TCAIM	novel	1998	4	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	1	60498	junction_4	44783.06607245645	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	611	1669	15.0	-686	False	AATAAA	-16
PB.8053.1	chr3	+	2005	4	full-splice_match	TCAIM	ENST00000383746.7	1998	4	-15	8	-15	-6	multi-exon	FALSE	canonical	1	74176	junction_1	64129.40886121506	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-692	False	NA	NA
PB.11114.1	chr8	-	3579	11	novel_in_catalog	SLC20A2	novel	3657	11	NA	NA	14	-2	no_combination_of_known_junctions	FALSE	canonical	1	106835	junction_10	58809.35078879888	NA	0	NA	TRUE	NA	NA	NA	B	coding	652	1959	295	2253	20.0	-5	True	AATAAA	-14
PB.11216.2	chr8	+	3714	7	full-splice_match	CA13	ENST00000321764.3	3815	7	-12	113	-12	-113	multi-exon	FALSE	canonical	1	25826	junction_1	6057.565645996381	NA	8	NA	TRUE	NA	NA	NA	C	coding	262	789	315	1103	15.0	0	True	ATTAAA	-14
PB.4190.1	chr16	+	2528	9	incomplete-splice_match	FLYWCH1	ENST00000416288.6	4963	10	-19	11049	-1	-13	3prime_fragment	FALSE	canonical	1	42456	junction_3	66782.66645619954	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	363	2474	50.0	-11	True	NA	NA
PB.4190.3	chr16	+	3594	10	full-splice_match	FLYWCH1	ENST00000253928.13	5037	10	47	1396	3	1	multi-exon	FALSE	canonical	1	126635	junction_3	58775.883270035505	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	359	2509	10.0	-7	True	AATAAA	-18
PB.4190.2	chr16	+	4990	10	full-splice_match	FLYWCH1	ENST00000253928.13	5037	10	45	2	1	-2	multi-exon	FALSE	canonical	1	126635	junction_3	58775.883270035505	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	361	2511	45.0	-9	True	AATAAA	-21
PB.4190.4	chr16	+	3662	11	novel_in_catalog	FLYWCH1	novel	5037	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	13498	junction_2	100865.4904012765	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	431	2578	15.0	15	True	AATAAA	-17
PB.79.14	chr1	-	3716	19	full-splice_match	CLSTN1	ENST00000377298.8	5221	19	552	953	10	-951	multi-exon	FALSE	canonical	1	129042	junction_17	590939.2017277101	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	242	3187	20.0	-15	True	AATAAA	-21
PB.10296.1	chr6	+	4166	2	intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	115	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	110	333	894	1226	25.0	NA	False	NA	NA
PB.9061.3	chr4	-	3531	6	novel_not_in_catalog	CBR4	novel	1198	6	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	89606	junction_2	89616.00693938555	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	177	758	30.0	-11	True	AATAAA	-16
PB.79.12	chr1	-	3695	18	full-splice_match	CLSTN1	ENST00000361311.4	4647	18	11	941	11	-941	multi-exon	FALSE	canonical	1	274110	junction_17	501789.1865836319	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	241	3156	35.0	-14	True	AATAAA	-31
PB.1539.1	chr10	-	5203	10	novel_in_catalog	CPEB3	novel	7664	10	NA	NA	0	394	combination_of_known_junctions	FALSE	canonical	1	15155	junction_9	10561.500945520113	NA	2	NA	TRUE	NA	NA	NA	A	coding	684	2055	174	2228	85.0	-10	True	NA	NA
PB.11597.13	chr9	+	2812	21	novel_not_in_catalog	SMC5	novel	5980	25	NA	NA	16	2955	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	80797.00296694179	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2709	102	2810	70.0	0	True	AATATA	-2
PB.6953.1	chr2	+	5799	13	full-splice_match	BMPR2	ENST00000374580.8	11461	13	-609	6271	-609	1139	multi-exon	FALSE	canonical	1	158756	junction_1	37268.05275551032	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	1149	4265	35.0	0	True	AATAAA	-13
PB.6953.2	chr2	+	4607	13	full-splice_match	BMPR2	ENST00000374580.8	11461	13	-578	7432	-578	-22	multi-exon	FALSE	canonical	1	158756	junction_1	37268.05275551032	NA	0	NA	TRUE	NA	NA	NA	C	coding	1038	3117	1118	4234	40.0	31	True	ATTAAA	-9
PB.6953.3	chr2	+	6926	13	full-splice_match	BMPR2	ENST00000374580.8	11461	13	-644	5179	-644	2231	multi-exon	FALSE	canonical	1	158756	junction_1	37268.05275551032	NA	0	NA	TRUE	NA	NA	NA	C	coding	1038	3117	1184	4300	35.0	6	True	AATAAA	-21
PB.6953.4	chr2	+	4576	12	novel_in_catalog	BMPR2	novel	11461	13	NA	NA	-654	-18	no_combination_of_known_junctions	FALSE	canonical	1	2652	junction_3	70317.73692296234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	1194	4199	30.0	-4	True	ATTAAA	-13
PB.6953.5	chr2	+	8117	12	novel_not_in_catalog	BMPR2	novel	11461	13	NA	NA	-642	-2703	any annotated donor/acceptor	FALSE	canonical	1	2073	junction_11	64239.16369923304	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	1182	2771	85.0	8	True	NA	NA
PB.6953.6	chr2	+	5113	13	full-splice_match	BMPR2	ENST00000374580.8	11461	13	-440	6788	-440	622	multi-exon	FALSE	canonical	1	158756	junction_1	37268.05275551032	NA	0	NA	TRUE	NA	NA	NA	C	coding	1038	3117	980	4096	35.0	2	True	AATAAA	-11
PB.6953.7	chr2	+	9385	13	full-splice_match	BMPR2	ENST00000374580.8	11461	13	-627	2703	-627	-2703	multi-exon	FALSE	canonical	1	158756	junction_1	37268.05275551032	NA	15	NA	TRUE	NA	NA	NA	C	coding	1038	3117	1167	4283	85.0	-18	True	NA	NA
PB.12179.2	chrX	-	3919	19	novel_in_catalog	SYTL4	novel	3885	19	NA	NA	-10	0	no_combination_of_known_junctions	TRUE	canonical	1	11031	junction_18	23488.70987186066	NA	5	NA	TRUE	NA	NA	NA	C	coding	671	2016	370	2385	20.0	-14	True	AATAAA	-16
PB.3366.14	chr14	+	3893	1	novel_in_catalog	G2E3	novel	5804	15	NA	NA	5	-26427	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	7	True	NA	NA
PB.1698.3	chr10	+	4032	6	full-splice_match	BUB3	ENST00000407911.2	895	6	-467	-2670	-10	-2	multi-exon	FALSE	canonical	1	799250	junction_2	427784.2958655682	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	356	1501	25.0	-10	True	AATAAA	-19
PB.12179.1	chrX	-	3740	17	full-splice_match	SYTL4	ENST00000263033.9	2335	17	-1	-1404	-1	1	multi-exon	TRUE	canonical	1	5943	junction_16	18927.198042763754	NA	1	NA	TRUE	NA	NA	NA	C	coding	671	2016	190	2205	15.0	-3	True	AATAAA	-17
PB.1698.5	chr10	+	4780	9	novel_not_in_catalog	BUB3	novel	7828	8	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	782939.4220004248	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	94	1074	20.0	-9	True	NA	NA
PB.1698.4	chr10	+	2409	7	incomplete-splice_match	BUB3	ENST00000368865.8	7828	8	745	5106	163	-4	5prime_fragment	FALSE	canonical	1	799250	junction_2	457440.0593970088	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	41	883	20.0	-9959	False	AATAAA	-17
PB.1698.7	chr10	+	1974	8	full-splice_match	BUB3	ENST00000368865.8	7828	8	123	5731	-2	-476	multi-exon	FALSE	canonical	1	799250	junction_3	548304.5224230336	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	87	1073	70.0	-2	True	ATTAAA	-4
PB.1698.6	chr10	+	2971	7	incomplete-splice_match	BUB3	ENST00000368858.9	1361	8	-21	629	-8	-476	3prime_fragment	FALSE	canonical	1	799250	junction_3	512041.0788588321	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	93	1067	70.0	-8	True	ATTAAA	-4
PB.1698.9	chr10	+	1372	8	full-splice_match	BUB3	ENST00000368858.9	1361	8	-13	2	0	-2	multi-exon	FALSE	canonical	1	301768	junction_7	664094.4460605658	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	85	1065	25.0	0	True	AATAAA	-19
PB.1698.8	chr10	+	2600	8	full-splice_match	BUB3	ENST00000368865.8	7828	8	124	5104	-1	-2	multi-exon	FALSE	canonical	1	799250	junction_3	548304.5224230336	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	86	1072	25.0	-1	True	AATAAA	-19
PB.965.2	chr1	+	3866	14	incomplete-splice_match	CEP350	ENST00000367607.7	13491	38	68	90332	33	-24157	3prime_fragment	FALSE	canonical	1	14570	junction_2	47972.704160156216	NA	1	NA	TRUE	NA	NA	NA	B	coding	1172	3516	351	3866	75.0	-4	True	NA	NA
PB.10304.1	chr6	+	5711	3	novel_in_catalog	TULP4	novel	680	2	NA	NA	-39	-65088	combination_of_known_junctions	FALSE	canonical	1	22163	junction_1	26308.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	185	558	2074	2631	85.0	2	True	NA	NA
PB.6833.7	chr2	+	3804	16	full-splice_match	DYNC1I2	ENST00000409197.5	2572	16	60	-1292	-12	1283	multi-exon	FALSE	canonical	1	295	junction_4	73533.61094610636	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	152	1990	15.0	-23	True	AATAAA	-18
PB.11597.12	chr9	+	5778	23	novel_in_catalog	SMC5	novel	5980	25	NA	NA	16	-15	no_combination_of_known_junctions	FALSE	canonical	1	7683	junction_17	78394.17679071715	NA	3	1	TRUE	NA	NA	NA	C	coding	1044	3135	102	3236	15.0	0	True	AATAAA	-18
PB.2202.1	chr11	+	3893	4	novel_in_catalog	TMEM126B	novel	1210	6	NA	NA	0	1	intron_retention	TRUE	canonical	1	427123	junction_1	92678.74073498313	NA	1	NA	TRUE	NA	NA	NA	B	coding	140	423	2742	3164	10.0	-9	True	AATAAA	-35
PB.2202.3	chr11	+	3965	4	novel_in_catalog	TMEM126B	novel	1210	6	NA	NA	1	-9	intron_retention	FALSE	canonical	1	616448	junction_2	139737.17942146488	NA	2	NA	TRUE	NA	NA	NA	B	coding	200	603	3099	3701	50.0	4	True	AATAAA	-17
PB.2202.2	chr11	+	4255	3	novel_in_catalog	TMEM126B	novel	1210	6	NA	NA	-1	0	intron_retention	FALSE	canonical	1	616448	junction_2	6911.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	140	423	3105	3527	10.0	-2	True	AATAAA	-34
PB.10866.4	chr7	+	6145	43	novel_not_in_catalog	NUP205	novel	6266	43	NA	NA	-2	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_34	160222.8972740671	NA	1	1	TRUE	NA	NA	NA	C	coding	1645	4938	29	4966	75.0	-14	True	AATAAA	-9
PB.5617.9	chr19	-	3127	15	novel_not_in_catalog	EEF2	novel	352	2	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	44	junction_3	6513044.731122991	NA	3	1	TRUE	NA	NA	NA	C	coding	848	2547	84	2630	15.0	-1	True	AATAAA	-16
PB.10866.1	chr7	+	6241	43	full-splice_match	NUP205	ENST00000285968.10	6266	43	9	16	-4	-8	multi-exon	FALSE	canonical	1	223800	junction_10	143971.11097812868	NA	55	9	TRUE	NA	NA	NA	C	coding	2012	6039	18	6056	75.0	-3	True	AATAAA	-9
PB.10866.3	chr7	+	6494	43	novel_in_catalog	NUP205	novel	6266	43	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	1	3571	junction_1	156764.65679399017	NA	0	NA	TRUE	NA	NA	NA	C	coding	1844	5535	775	6309	75.0	-14	True	AATAAA	-9
PB.10866.2	chr7	+	5603	40	novel_not_in_catalog	NUP205	novel	6266	43	NA	NA	-4	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	163987.12580165063	NA	0	NA	TRUE	NA	NA	NA	C	coding	1795	5388	31	5418	75.0	-16	True	AATAAA	-9
PB.8043.1	chr3	-	2794	1	antisense	novelGene_TRAK1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	120	363	2040	2402	90.0	NA	False	NA	NA
PB.4449.8	chr16	+	2304	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	299078.4245336924	NA	2	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	5.0	0	True	AATAAA	-16
PB.4449.9	chr16	+	2139	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	299078.4245336924	NA	6	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	25.0	0	True	AATAAA	-7
PB.4449.2	chr16	+	3365	4	novel_in_catalog	CCL22	novel	2929	3	NA	NA	11	18852	no_combination_of_known_junctions	FALSE	canonical	1	323	junction_2	238432.7135035515	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	276	1355	30.0	0	True	AATAAA	-17
PB.4449.3	chr16	+	2910	3	full-splice_match	CCL22	ENST00000219235.4	2929	3	11	8	11	-8	multi-exon	FALSE	canonical	1	578463	junction_1	50032.0	NA	28	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	25.0	0	True	AATAAA	-7
PB.4449.1	chr16	+	2064	3	full-splice_match	CCL22	ENST00000219235.4	2929	3	12	853	12	-853	multi-exon	FALSE	canonical	1	578463	junction_1	50032.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	93	282	34	315	35.0	1	True	NA	NA
PB.4449.6	chr16	+	2595	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	299078.4245336924	NA	0	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	5.0	0	True	AATAAA	-16
PB.4449.7	chr16	+	2462	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	299078.4245336924	NA	0	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	25.0	0	True	AATAAA	-7
PB.4449.4	chr16	+	2831	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	299078.4245336924	NA	30	1	TRUE	NA	NA	NA	C	coding	93	282	35	316	25.0	0	True	AATAAA	-7
PB.4449.5	chr16	+	2797	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	-8	any annotated donor/acceptor	FALSE	canonical	1	27	junction_3	299065.81590605696	NA	0	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	25.0	0	True	AATAAA	-7
PB.11597.11	chr9	+	1569	10	incomplete-splice_match	SMC5	ENST00000361138.6	5980	25	12	54688	12	13416	3prime_fragment	FALSE	canonical	1	205280	junction_8	26043.23678656299	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1464	106	1569	30.0	-4	True	TTTAAA	-31
PB.11649.7	chr9	-	3335	8	full-splice_match	BICD2	ENST00000375512.3	4636	8	-23	1324	-23	-1324	multi-exon	FALSE	canonical	1	105321	junction_1	88302.8613563246	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	92	2566	70.0	-3	True	AAGAAA	-41
PB.6581.4	chr2	+	3475	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	0	4	0	-4	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	3	NA	TRUE	NA	NA	NA	C	coding	292	879	26	904	20.0	0	True	AATAAA	-18
PB.11649.6	chr9	-	5962	7	full-splice_match	BICD2	ENST00000356884.10	6427	7	-34	499	-34	-499	multi-exon	FALSE	canonical	1	258441	junction_3	52144.914109357036	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	103	2670	70.0	-14	True	AAGAAA	-19
PB.8251.4	chr3	+	4846	4	incomplete-splice_match	CRYBG3	ENST00000389622.6	10729	22	-38	69128	-38	-65426	3prime_fragment	FALSE	canonical	1	37103	junction_1	10660.26523539114	NA	0	NA	TRUE	NA	NA	NA	C	coding	1547	4641	206	4846	65.0	-9	True	AATAAA	-44
PB.2787.1	chr12	-	1707	1	full-splice_match	MKRN9P	ENST00000546624.2	1451	1	-26	-230	-26	230	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	41	NA	NA	NA	NA	NA	A	coding	168	507	767	1273	95.0	-48	False	AATAAA	-20
PB.6581.1	chr2	+	1506	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	-6	1979	-6	751	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	32	910	60.0	-6	True	NA	NA
PB.11597.10	chr9	+	5844	24	novel_in_catalog	SMC5	novel	5980	25	NA	NA	7	-15	no_combination_of_known_junctions	FALSE	canonical	1	10770	junction_10	78475.38955173644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3192	111	3302	15.0	-9	True	AATAAA	-18
PB.10668.19	chr7	-	3568	18	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	10	-68243	intron_retention	FALSE	canonical	1	8052	junction_17	83819.37561666852	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2211	639	2849	40.0	-1	True	AATAAA	-20
PB.9421.8	chr5	+	2393	12	novel_not_in_catalog	LMNB1	novel	3475	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	322012.8042585104	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	507	1637	20.0	-7	True	AATAAA	-20
PB.6780.20	chr2	+	4137	6	incomplete-splice_match	RIF1	ENST00000453091.6	8053	35	55107	-1714	290	1714	5prime_fragment	TRUE	canonical	1	117920	junction_2	73508.7587744481	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	52	1872	40.0	-659	False	AATAAA	-17
PB.10668.11	chr7	-	3378	19	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	-8	-68242	no_combination_of_known_junctions	FALSE	canonical	1	10341	junction_18	88730.7072402673	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2211	448	2658	40.0	-19	True	AATAAA	-21
PB.10668.10	chr7	-	3439	19	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	10	-68242	no_combination_of_known_junctions	FALSE	canonical	1	16446	junction_18	87818.31010301191	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2211	509	2719	40.0	-1	True	AATAAA	-21
PB.10668.13	chr7	-	3304	18	novel_not_in_catalog	AC000120.3	novel	2642	18	NA	NA	14	-68242	any annotated donor/acceptor	FALSE	canonical	1	8120	junction_17	91555.87355781309	NA	32	1	TRUE	NA	NA	NA	B	coding	736	2211	374	2584	40.0	3	True	AATAAA	-21
PB.10668.15	chr7	-	3229	18	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	-7	-68242	no_combination_of_known_junctions	FALSE	canonical	1	10341	junction_17	94610.30628965035	NA	2	NA	TRUE	NA	NA	NA	B	coding	736	2211	299	2509	40.0	-18	True	AATAAA	-21
PB.10668.14	chr7	-	3226	18	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	11	-68242	no_combination_of_known_junctions	FALSE	canonical	1	14429	junction_17	90561.08269822114	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2211	296	2506	40.0	0	True	AATAAA	-21
PB.8537.2	chr3	+	2950	21	full-splice_match	USP13	ENST00000263966.7	8323	21	338	5035	43	-40	multi-exon	FALSE	canonical	1	66752	junction_1	31200.53678107959	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	134	2725	55.0	-74	False	TATAAA	-6
PB.10668.16	chr7	-	3035	17	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	33	-68242	no_combination_of_known_junctions	FALSE	canonical	1	4237	junction_16	80299.94162270216	NA	2	NA	TRUE	NA	NA	NA	B	coding	736	2211	105	2315	40.0	22	True	AATAAA	-21
PB.4399.2	chr16	+	3401	7	novel_in_catalog	CLUHP3	novel	1812	9	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	12847	junction_2	33702.284041045845	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	2116	2511	75.0	-19	True	NA	NA
PB.4399.1	chr16	+	1610	8	full-splice_match	CLUHP3	ENST00000532304.5	1571	8	-54	15	-9	0	multi-exon	TRUE	canonical	1	33154	junction_1	25132.313493807538	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	320	763	75.0	-19	True	NA	NA
PB.6581.9	chr2	+	1237	5	full-splice_match	MRPL19	ENST00000476622.1	744	5	112	-605	112	605	multi-exon	FALSE	canonical	1	335211	junction_2	187965.50729505534	NA	2	1	TRUE	NA	NA	NA	C	coding	194	585	203	787	40.0	19	True	NA	NA
PB.6581.8	chr2	+	4033	5	full-splice_match	MRPL19	ENST00000476622.1	744	5	56	-3345	56	615	multi-exon	FALSE	canonical	1	335211	junction_2	187965.50729505534	NA	16	1	TRUE	NA	NA	NA	C	coding	194	585	259	843	15.0	-37	False	NA	NA
PB.8252.7	chr3	-	2598	10	full-splice_match	RIOX2	ENST00000333396.11	5347	10	316	2433	-54	100	multi-exon	FALSE	canonical	1	27874	junction_9	102887.82001712614	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	268	1665	35.0	274	False	AATAAA	-17
PB.8527.7	chr3	-	6512	16	full-splice_match	TBL1XR1	ENST00000457928.6	4101	16	172	-2583	1	-2	multi-exon	FALSE	canonical	1	119813	junction_4	161165.38292402896	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	226	1770	20.0	0	True	AATAAA	-15
PB.11625.1	chr9	-	2725	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-14	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835621.6377704098	NA	2	1	TRUE	NA	NA	NA	B	coding	438	1317	236	1552	15.0	-32	True	AATAAA	-21
PB.8527.4	chr3	-	6439	15	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	43323	junction_14	177800.94600222382	NA	5	NA	TRUE	NA	NA	NA	C	coding	514	1545	152	1696	25.0	-2	True	AATAAA	-16
PB.8527.9	chr3	-	4678	15	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	0	411	combination_of_known_junctions	FALSE	canonical	1	43323	junction_14	177800.94600222382	NA	5	NA	TRUE	NA	NA	NA	C	coding	514	1545	151	1695	60.0	-1	True	AATAAA	-22
PB.8527.8	chr3	-	4754	16	full-splice_match	TBL1XR1	ENST00000457928.6	4101	16	171	-824	0	411	multi-exon	FALSE	canonical	1	119813	junction_4	161165.38292402896	NA	3	NA	TRUE	NA	NA	NA	C	coding	514	1545	227	1771	60.0	-1	True	AATAAA	-22
PB.7938.4	chr3	-	3718	5	full-splice_match	VGLL4	ENST00000430365.6	1377	5	-19	-2322	-19	-84	multi-exon	FALSE	canonical	1	198403	junction_4	59299.88437172538	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	441	1316	65.0	101	False	AATATA	-28
PB.4110.1	chr15	+	3481	13	full-splice_match	ALDH1A3	ENST00000329841.9	3924	13	440	3	3	-3	multi-exon	FALSE	canonical	1	415280	junction_3	111745.84264013657	NA	0	NA	TRUE	NA	NA	NA	A	coding	512	1539	93	1631	25.0	-5858	False	AATAAA	-15
PB.6279.1	chr19	+	4998	3	antisense	novelGene_ZBTB45_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	7710	junction_2	5432.5	NA	1	NA	FALSE	NA	NA	NA	A	coding	118	357	2820	3176	100.0	7	True	NA	NA
PB.8854.8	chr4	-	5062	13	full-splice_match	LIN54	ENST00000340417.7	6127	13	-53	1118	-53	-6	multi-exon	FALSE	canonical	1	33684	junction_12	35847.236981216556	NA	2	NA	TRUE	NA	NA	NA	C	coding	749	2250	432	2681	35.0	2058	False	AATAAA	-18
PB.8854.9	chr4	-	4069	13	full-splice_match	LIN54	ENST00000510557.5	2257	13	26	-1838	26	-7	multi-exon	FALSE	canonical	1	34483	junction_11	40577.87705852031	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	103	1689	35.0	27	True	AATAAA	-17
PB.9014.1	chr4	+	2805	6	novel_not_in_catalog	LSM6	novel	2259	4	NA	NA	-4	4431	any annotated donor/acceptor	FALSE	canonical	1	1686	junction_5	408066.4272137075	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-13	True	NA	NA
PB.8854.4	chr4	-	4375	13	full-splice_match	LIN54	ENST00000442461.6	4254	13	-127	6	-29	-6	multi-exon	FALSE	canonical	1	33684	junction_12	40746.73668085444	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	408	1994	35.0	2082	False	AATAAA	-18
PB.8854.5	chr4	-	4128	12	novel_in_catalog	LIN54	novel	810	4	NA	NA	1	-6	combination_of_known_junctions	TRUE	canonical	1	3580	junction_8	51848.54088959655	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	809	1747	35.0	-46	True	AATAAA	-18
PB.8854.6	chr4	-	3996	12	novel_in_catalog	LIN54	novel	810	4	NA	NA	-4	-6	no_combination_of_known_junctions	FALSE	canonical	1	2309	junction_9	51663.5659388767	NA	5	NA	TRUE	NA	NA	NA	C	coding	348	1047	569	1615	35.0	10	True	AATAAA	-18
PB.8854.7	chr4	-	3914	12	novel_not_in_catalog	LIN54	novel	810	4	NA	NA	63	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	48016.846302208534	NA	2	1	TRUE	NA	NA	NA	C	coding	348	1047	487	1533	35.0	10	True	AATAAA	-18
PB.8854.1	chr4	-	4547	11	novel_in_catalog	LIN54	novel	810	4	NA	NA	-15	-5	intron_retention	FALSE	canonical	1	10386	junction_9	47438.07646616798	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	183	2165	30.0	-1	True	AATAAA	-19
PB.8854.2	chr4	-	4746	13	full-splice_match	LIN54	ENST00000505397.1	2742	13	52	-2056	13	-6	multi-exon	FALSE	canonical	1	34737	junction_12	35647.612521738396	NA	4	NA	TRUE	NA	NA	NA	C	coding	749	2250	116	2365	35.0	14	True	AATAAA	-18
PB.8854.3	chr4	-	4739	11	full-splice_match	LIN54	ENST00000506560.5	2757	11	-117	-1865	-3	-6	multi-exon	FALSE	canonical	1	10386	junction_9	47607.55720681329	NA	2	NA	TRUE	NA	NA	NA	C	coding	660	1983	376	2358	35.0	-44	True	AATAAA	-18
PB.8252.8	chr3	-	2565	10	novel_in_catalog	RIOX2	novel	5347	10	NA	NA	-122	99	combination_of_known_junctions	FALSE	canonical	1	81363	junction_4	107732.34514810819	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	239	1633	35.0	-164	False	AATAAA	-16
PB.8823.3	chr4	+	3846	4	full-splice_match	PARM1	ENST00000307428.7	5011	4	-74	1239	-53	-1239	multi-exon	FALSE	canonical	1	216896	junction_2	9300.593672807488	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	287	1219	20.0	-1984	False	AATAAA	-29
PB.8252.9	chr3	-	2271	10	novel_in_catalog	RIOX2	novel	5347	10	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	1	81363	junction_4	107732.34514810819	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	105	1499	60.0	-30	True	TATAAA	-40
PB.10384.6	chr7	+	2872	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	125	junction_4	504019.90163762384	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	125	1477	5.0	-3	True	AATAAA	-21
PB.12151.1	chrX	+	3677	1	full-splice_match	MAGEE1	ENST00000361470.3	3630	1	-50	3	-50	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	957	2874	258	3131	40.0	-36	True	AATAAA	-25
PB.10384.5	chr7	+	2902	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	284	junction_4	503985.2792248599	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	125	1507	5.0	-3	True	AATAAA	-21
PB.10384.2	chr7	+	2386	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	427978.75701095257	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	127	1608	5.0	-5	True	AATAAA	-20
PB.10384.3	chr7	+	2016	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	427978.75701095257	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	127	1608	5.0	-5	True	AATAAA	-21
PB.11597.14	chr9	+	2738	20	novel_in_catalog	SMC5	novel	5980	25	NA	NA	16	2956	no_combination_of_known_junctions	FALSE	canonical	1	64273	junction_15	74667.64054731505	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2637	102	2738	70.0	0	True	AATATA	-3
PB.10384.1	chr7	+	3104	5	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	6918	junction_4	470314.7614844632	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	127	1452	5.0	-5	True	AATAAA	-21
PB.9828.4	chr6	-	2105	8	full-splice_match	TRIM27	ENST00000377199.3	2967	8	27	835	26	637	multi-exon	FALSE	canonical	1	514463	junction_7	110561.17283076498	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	331	1872	15.0	22	True	AATAAA	-19
PB.9828.5	chr6	-	3654	7	novel_in_catalog	TRIM27	novel	1813	5	NA	NA	22	637	intron_retention	FALSE	canonical	1	514463	junction_6	107405.22287269523	NA	3	NA	TRUE	NA	NA	NA	C	coding	315	948	335	1282	15.0	18	True	AATAAA	-19
PB.9828.2	chr6	-	2716	8	full-splice_match	TRIM27	ENST00000377199.3	2967	8	249	2	173	-2	multi-exon	FALSE	canonical	1	514463	junction_7	110561.17283076498	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	109	1650	10.0	-8	True	AATAAA	-16
PB.9828.3	chr6	-	2472	8	full-splice_match	TRIM27	ENST00000377199.3	2967	8	-23	518	-23	-518	multi-exon	FALSE	canonical	1	514463	junction_7	110561.17283076498	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	381	1922	20.0	0	True	ATTAAA	-18
PB.10384.8	chr7	+	3030	4	novel_in_catalog	FSCN1	novel	2777	5	NA	NA	-9	0	intron_retention	FALSE	canonical	1	614392	junction_1	293832.8324726304	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	124	1389	5.0	-2	True	AATAAA	-21
PB.10384.9	chr7	+	1949	5	full-splice_match	FSCN1	ENST00000382361.7	2777	5	827	1	-198	0	multi-exon	FALSE	canonical	1	614392	junction_1	259731.1100834621	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	122	769	5.0	-4858	False	AATAAA	-21
PB.9669.17	chr5	+	2542	1	novel_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-493	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	112	339	369	707	100.0	0	True	NA	NA
PB.9669.16	chr5	+	2552	9	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	1856125.6987296145	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	33	1355	30.0	0	True	AATAAA	-18
PB.474.3	chr1	-	4237	9	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-25	2	intron_retention	FALSE	canonical	1	308497	junction_1	307863.4329974646	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	42	728	30.0	-2	True	AATAAA	-19
PB.9669.19	chr5	+	1686	9	novel_not_in_catalog	SQSTM1	novel	842	6	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	44839	junction_8	1843900.6294873538	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	33	1391	35.0	0	True	AATAAA	-19
PB.2657.1	chr12	+	2799	3	full-splice_match	GDF11	ENST00000257868.9	8657	3	431	5427	312	-5276	multi-exon	FALSE	canonical	1	136782	junction_1	23938.0	NA	4	1	TRUE	NA	NA	NA	A	coding	263	792	39	830	30.0	419	False	AGTAAA	-17
PB.474.6	chr1	-	5314	9	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	549047	junction_1	250516.3040891438	NA	7	NA	TRUE	NA	NA	NA	C	coding	228	687	24	710	25.0	16	True	AATAAA	-16
PB.474.5	chr1	-	2771	10	full-splice_match	ZRANB2	ENST00000370920.7	3078	10	263	44	-23	2	multi-exon	FALSE	canonical	1	308497	junction_1	299404.42773975944	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	40	1032	30.0	0	True	AATAAA	-19
PB.9669.18	chr5	+	2015	8	full-splice_match	SQSTM1	ENST00000389805.8	2986	8	146	825	0	-2	multi-exon	FALSE	canonical	1	2631348	junction_1	1119419.842043372	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	33	1355	35.0	0	True	ATTAAA	-21
PB.9421.3	chr5	+	2210	11	full-splice_match	LMNB1	ENST00000261366.9	2878	11	667	1	436	-1	multi-exon	FALSE	canonical	1	664182	junction_1	147664.127379672	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	325	1455	25.0	-4	True	AATAAA	-19
PB.756.2	chr1	-	2773	13	full-splice_match	TDRKH	ENST00000458431.6	2768	13	5	-10	5	-4	multi-exon	FALSE	canonical	1	24068	junction_12	38023.85861973155	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	124	1809	50.0	-13	True	AATAAA	-20
PB.474.9	chr1	-	1896	11	novel_not_in_catalog	ZRANB2	novel	3078	10	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	396099.42423113924	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	35	1027	25.0	5	True	AATAAA	-16
PB.2749.11	chr12	+	3139	28	novel_not_in_catalog	NUP107	novel	6457	28	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	525	junction_1	144769.7465597963	NA	1	NA	TRUE	NA	NA	NA	C	coding	825	2478	439	2916	20.0	8	True	AATAAA	-33
PB.2749.10	chr12	+	2816	26	novel_in_catalog	NUP107	novel	6457	28	NA	NA	-5	-3	no_combination_of_known_junctions	FALSE	canonical	1	1249	junction_22	143739.78343322492	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	80	2593	20.0	0	True	AATAAA	-33
PB.4977.8	chr17	+	3034	9	incomplete-splice_match	FKBP10	ENST00000321562.8	2662	10	27	6	27	0	intron_retention	FALSE	canonical	1	863990	junction_2	157053.22617587325	NA	1	NA	TRUE	NA	NA	NA	C	coding	717	2154	78	2231	15.0	-9300	False	AATAAA	-11
PB.4977.9	chr17	+	1226	4	incomplete-splice_match	FKBP10	ENST00000585664.5	598	5	284	-459	-25	459	5prime_fragment	FALSE	canonical	1	863990	junction_2	188387.54453578457	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	72	1064	95.0	-9294	False	NA	NA
PB.5427.9	chr18	-	2447	14	full-splice_match	OSBPL1A	ENST00000399443.7	3317	14	278	592	-269	497	multi-exon	FALSE	canonical	1	172313	junction_13	81848.30279104844	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	592	1905	60.0	-1	True	NA	NA
PB.5427.8	chr18	-	3541	28	novel_not_in_catalog	OSBPL1A	novel	4195	28	NA	NA	-14	497	any annotated donor/acceptor	FALSE	canonical	1	103	junction_27	170818.96582712038	NA	11	1	TRUE	NA	NA	NA	C	coding	950	2853	147	2999	60.0	21	True	NA	NA
PB.7341.21	chr20	+	3354	24	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	25	-76	no_combination_of_known_junctions	FALSE	canonical	1	7128	junction_16	349349.01361497794	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	99	1844	30.0	-2	True	AGTAAA	-15
PB.7341.20	chr20	+	3127	25	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	9	-366	any annotated donor/acceptor	FALSE	canonical	1	4296	junction_3	342330.74712640594	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	115	2979	35.0	-18	True	ATTAAA	-16
PB.5427.5	chr18	-	4046	27	novel_in_catalog	AC090772.3	novel	735	3	NA	NA	-235643	-2544	no_combination_of_known_junctions	FALSE	canonical	1	13855	junction_9	170127.77910119595	NA	0	NA	TRUE	NA	NA	NA	B	coding	905	2718	203	2920	20.0	-31	True	AATAAA	-15
PB.4977.1	chr17	+	2570	10	full-splice_match	FKBP10	ENST00000321562.8	2662	10	86	6	28	0	multi-exon	FALSE	canonical	1	863990	junction_2	166438.70995387793	NA	9	1	TRUE	NA	NA	NA	C	coding	582	1749	19	1767	15.0	-9241	False	AATAAA	-11
PB.4977.2	chr17	+	3857	7	novel_in_catalog	FKBP10	novel	598	5	NA	NA	7	0	intron_retention	FALSE	canonical	1	863990	junction_2	179521.73675204965	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	98	1030	15.0	-9320	False	AATAAA	-11
PB.4977.3	chr17	+	2698	11	novel_not_in_catalog	FKBP10	novel	598	5	NA	NA	21	0	any annotated donor/acceptor	FALSE	canonical	1	41251	junction_8	459168.69647914806	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1806	84	1889	10.0	-9306	False	AATAAA	-17
PB.4977.4	chr17	+	3717	8	novel_in_catalog	FKBP10	novel	598	5	NA	NA	23	0	intron_retention	FALSE	canonical	1	863990	junction_2	183229.7139575882	NA	3	NA	TRUE	NA	NA	NA	C	coding	373	1122	82	1203	10.0	-9304	False	AATAAA	-17
PB.4977.5	chr17	+	3356	8	novel_in_catalog	FKBP10	novel	598	5	NA	NA	23	0	intron_retention	FALSE	canonical	1	863990	junction_2	167905.12475192407	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	82	1014	15.0	-9304	False	AATAAA	-11
PB.4977.6	chr17	+	2771	10	novel_not_in_catalog	FKBP10	novel	598	5	NA	NA	23	0	any annotated donor/acceptor	FALSE	canonical	1	5486	junction_7	387931.43518117786	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	82	1968	15.0	-9304	False	AATAAA	-11
PB.4977.7	chr17	+	2809	11	novel_in_catalog	FKBP10	novel	598	5	NA	NA	25	-5	combination_of_known_junctions	FALSE	canonical	1	7916	junction_6	462958.6094048149	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	80	2011	30.0	-9302	False	AATAAA	-6
PB.9214.5	chr5	-	1967	11	full-splice_match	PAIP1	ENST00000306846.7	2782	11	-12	827	2	-1	multi-exon	FALSE	canonical	1	454	junction_1	61812.32909088607	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	246	1685	15.0	-15	True	AATAAA	-35
PB.6477.14	chr2	-	2540	29	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	-1	-238	any annotated donor/acceptor	FALSE	canonical	1	6505	junction_1	81722.80776942329	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	257	2362	80.0	-9	True	NA	NA
PB.6717.1	chr2	-	2597	1	intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-29	False	NA	NA
PB.4031.1	chr15	-	2709	4	full-splice_match	STARD5	ENST00000560723.5	2683	4	-20	-6	-20	6	multi-exon	FALSE	canonical	1	94717	junction_1	3701.967885087906	NA	0	NA	TRUE	NA	NA	NA	A	coding	192	579	1536	2114	20.0	-1	True	TTTAAA	-32
PB.5479.16	chr18	-	4866	15	novel_in_catalog	MBD1	novel	2532	15	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	211866	junction_6	113669.86959980527	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	1413	2399	35.0	-17	True	ATTAAA	-19
PB.5479.17	chr18	-	4469	16	full-splice_match	MBD1	ENST00000591416.5	4905	16	248	188	0	-3	multi-exon	FALSE	canonical	1	211866	junction_6	110419.86402446899	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	185	2002	35.0	-16	True	ATTAAA	-19
PB.5479.14	chr18	-	4555	15	novel_in_catalog	MBD1	novel	2532	15	NA	NA	8	4	intron_retention	FALSE	canonical	1	211866	junction_6	112047.20595037485	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	771	2081	30.0	-8	True	ATTAAA	-26
PB.5479.15	chr18	-	2666	16	full-splice_match	MBD1	ENST00000347968.7	3091	16	245	180	-8	4	multi-exon	FALSE	canonical	1	78830	junction_6	145209.37773787967	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	193	1842	30.0	-24	True	ATTAAA	-26
PB.5479.12	chr18	-	2708	16	novel_in_catalog	MBD1	novel	2532	15	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	1	35355	junction_1	161101.45093386204	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	198	2066	35.0	-29	True	ATTAAA	-19
PB.5479.13	chr18	-	3072	17	full-splice_match	MBD1	ENST00000269468.9	3259	17	0	187	0	-3	multi-exon	FALSE	canonical	1	120044	junction_1	127787.27421651775	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	438	2255	35.0	-8	True	ATTAAA	-19
PB.5479.11	chr18	-	2758	16	full-splice_match	MBD1	ENST00000590208.5	2913	16	160	-5	-3	5	multi-exon	FALSE	canonical	1	88258	junction_1	133884.6036678851	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	188	2155	30.0	-19	True	ATTAAA	-27
PB.1031.1	chr1	-	1520	6	full-splice_match	TMEM9	ENST00000367334.9	1529	6	10	-1	10	1	multi-exon	FALSE	canonical	1	475474	junction_5	195717.07313732238	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	77	628	20.0	-11	True	ATTAAA	-19
PB.1031.4	chr1	-	1783	6	full-splice_match	TMEM9	ENST00000485839.6	938	6	-19	-826	12	0	multi-exon	FALSE	canonical	1	54915	junction_5	360549.2786633195	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	342	893	25.0	-13	True	ATTAAA	-17
PB.5479.18	chr18	-	4283	15	full-splice_match	MBD1	ENST00000398493.5	1845	15	-3	-2435	-3	-3	multi-exon	FALSE	canonical	1	78830	junction_5	130593.49741617212	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	167	1816	35.0	2	True	ATTAAA	-19
PB.5479.19	chr18	-	2767	17	novel_in_catalog	MBD1	novel	2532	15	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	1	88188	junction_5	147107.6287556474	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	178	1950	35.0	-9	True	ATTAAA	-19
PB.999.9	chr1	+	1922	15	novel_not_in_catalog	ODR4	novel	1900	13	NA	NA	1	-890	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	83719.2092093126	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	156	1520	60.0	-8	True	AAGAAA	-8
PB.999.8	chr1	+	3251	14	full-splice_match	ODR4	ENST00000287859.10	3792	14	-40	581	-9	-581	multi-exon	FALSE	non_canonical	0	0	junction_11	72862.76806874038	NA	7	NA	TRUE	NA	NA	NA	C	coding	454	1365	166	1530	60.0	-18	True	NA	NA
PB.2647.8	chr12	-	8221	5	full-splice_match	CBX5	ENST00000209875.8	11528	5	-27	3334	4	-3334	multi-exon	FALSE	canonical	1	441839	junction_4	103769.68480004168	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	165	740	75.0	-8	True	NA	NA
PB.2647.9	chr12	-	3680	6	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	-1	4379	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242111.00549706534	NA	1	1	TRUE	NA	NA	NA	C	coding	191	576	139	714	60.0	18	True	NA	NA
PB.10360.1	chr7	-	3900	3	full-splice_match	ZFAND2A	ENST00000484977.1	1084	3	3	-2819	3	-1296	multi-exon	FALSE	canonical	1	480510	junction_2	8800.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.2647.4	chr12	-	2767	2	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	11	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-13
PB.2647.5	chr12	-	2309	1	incomplete-splice_match	CBX5	ENST00000209875.8	11528	5	46845	9	19268	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	8489	False	AATAAA	-13
PB.2647.6	chr12	-	3236	6	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	12	-3331	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242111.00549706534	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	157	732	70.0	0	True	NA	NA
PB.999.2	chr1	+	3804	14	full-splice_match	ODR4	ENST00000287859.10	3792	14	-17	5	14	-5	multi-exon	FALSE	non_canonical	0	0	junction_11	72862.76806874038	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	143	1507	45.0	5	True	NA	NA
PB.999.5	chr1	+	1607	14	full-splice_match	ODR4	ENST00000287859.10	3792	14	-41	2226	-10	-81	multi-exon	FALSE	non_canonical	0	0	junction_11	72862.76806874038	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	167	1531	40.0	-19	True	AATAAA	-14
PB.2647.1	chr12	-	1982	6	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	11	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242111.00549706534	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	158	733	25.0	-1	True	AATAAA	-21
PB.2647.2	chr12	-	4902	6	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242111.00549706534	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	170	745	20.0	-13	True	AATAAA	-20
PB.2647.3	chr12	-	4806	6	novel_not_in_catalog	CBX5	novel	11528	5	NA	NA	-1	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242111.00549706534	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	139	714	25.0	18	True	AATAAA	-14
PB.5132.23	chr17	+	2235	1	incomplete-splice_match	MSI2	ENST00000284073.6	6364	14	425882	35	55501	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1278	False	NA	NA
PB.6410.1	chr2	-	2143	1	incomplete-splice_match	STRN	ENST00000263918.8	8168	18	120531	159	56987	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-16
PB.9800.4	chr6	+	2476	8	novel_in_catalog	BTN3A3	novel	671	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8256	junction_4	50355.73465548763	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	229	1473	10.0	-11	True	AATAAA	-17
PB.2772.1	chr12	-	7198	23	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	161349	junction_21	114151.95203897239	NA	1	1	TRUE	NA	NA	NA	C	coding	847	2544	566	3109	35.0	2	True	AATAAA	-16
PB.11297.6	chr8	-	3112	6	full-splice_match	EIF3E	ENST00000521440.5	746	6	-26	-2340	-5	2340	multi-exon	FALSE	canonical	1	85153	junction_1	599694.913033419	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	23	541	25.0	-8	True	NA	NA
PB.5853.19	chr19	-	5188	10	novel_in_catalog	SUGP2	novel	747	6	NA	NA	1	-165	intron_retention	FALSE	canonical	1	218750	junction_9	123286.47791141765	NA	22	NA	TRUE	NA	NA	NA	C	coding	1092	3279	74	3352	70.0	18	True	NA	NA
PB.3517.3	chr14	-	8363	42	full-splice_match	ZFYVE26	ENST00000347230.8	9675	42	4	1308	0	205	multi-exon	FALSE	canonical	1	20497	junction_17	26895.688644526206	NA	0	NA	TRUE	NA	NA	NA	C	coding	2539	7620	136	7755	35.0	-1	True	AATAAA	-28
PB.4025.1	chr15	+	6536	19	full-splice_match	ARNT2	ENST00000303329.8	6558	19	13	9	13	0	multi-exon	FALSE	canonical	1	31235	junction_1	34421.77973892492	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	153	2306	40.0	-41	True	AATAAA	-16
PB.4025.2	chr15	+	6264	17	incomplete-splice_match	ARNT2	ENST00000533983.5	6690	20	16676	-4	-12336	4	5prime_fragment	FALSE	canonical	1	88295	junction_1	21600.80492568506	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	24	2030	35.0	NA	False	AATAAA	-20
PB.9400.3	chr5	-	3777	3	full-splice_match	FEM1C	ENST00000274457.4	5816	3	138	1901	138	-1901	multi-exon	FALSE	canonical	1	147859	junction_2	32180.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	425	2278	25.0	18	True	AATAAA	-13
PB.4025.4	chr15	+	5297	9	incomplete-splice_match	ARNT2	ENST00000533983.5	6690	20	113832	0	3959	0	5prime_fragment	FALSE	canonical	1	137628	junction_8	11812.437009752686	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	111	1067	40.0	3911	False	AATAAA	-16
PB.4025.5	chr15	+	4817	4	incomplete-splice_match	ARNT2	ENST00000533983.5	6690	20	139133	1	6298	-1	5prime_fragment	FALSE	canonical	1	137628	junction_3	10986.203539996071	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	112	588	40.0	-85	False	AATAAA	-15
PB.3517.4	chr14	-	7983	42	full-splice_match	ZFYVE26	ENST00000347230.8	9675	42	-18	1710	-17	-1	multi-exon	FALSE	canonical	1	20497	junction_17	26895.688644526206	NA	0	NA	TRUE	NA	NA	NA	C	coding	2539	7620	158	7777	15.0	-23	False	NA	NA
PB.1819.36	chr11	-	3845	22	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	665	junction_4	1713160.866771347	NA	12	1	TRUE	NA	NA	NA	C	coding	508	1527	926	2452	15.0	0	True	AATAAA	-15
PB.1819.37	chr11	-	3650	22	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	0	-1	intron_retention	TRUE	non_canonical	0	0	junction_21	1632292.5010067013	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	784	2889	15.0	2	True	AATAAA	-15
PB.1819.34	chr11	-	3978	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	3229390	junction_20	1146962.2582572836	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	1313	3217	15.0	-1	True	AATAAA	-15
PB.1819.35	chr11	-	3927	22	full-splice_match	EIF4G2	ENST00000526148.5	4001	22	69	5	-28	-1	multi-exon	TRUE	canonical	1	1369	junction_21	1632047.827735408	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	1061	3166	15.0	1021	False	AATAAA	-15
PB.1819.32	chr11	-	4011	20	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1013607	junction_7	1631970.1437899615	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	926	2407	15.0	0	True	AATAAA	-15
PB.1819.33	chr11	-	4000	22	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	11	-1	intron_retention	FALSE	canonical	1	1106	junction_21	1632094.8309746406	NA	2	NA	TRUE	NA	NA	NA	C	coding	701	2106	1134	3239	15.0	963	False	AATAAA	-15
PB.1819.30	chr11	-	3721	23	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	4581	junction_5	1704391.5107694843	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	926	2959	15.0	0	True	AATAAA	-16
PB.1819.31	chr11	-	4039	23	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	0	-1	intron_retention	FALSE	canonical	1	5477	junction_22	2036104.8848305175	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	1173	3278	15.0	-15	True	AATAAA	-15
PB.7120.3	chr2	+	4242	5	full-splice_match	LINC01881	ENST00000431796.5	565	5	0	-3677	0	3677	multi-exon	FALSE	canonical	1	14531	junction_3	24610.788908271512	NA	5	NA	TRUE	NA	NA	NA	C	coding	170	513	117	629	75.0	0	True	NA	NA
PB.1819.38	chr11	-	3588	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2087	junction_3	1686864.6964115787	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	927	2456	15.0	-1	True	AATAAA	-15
PB.1819.39	chr11	-	3527	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	1	-1	intron_retention	FALSE	canonical	1	44614	junction_4	2049389.8250060254	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	929	2215	15.0	-3	True	AATAAA	-15
PB.7120.2	chr2	+	3009	5	full-splice_match	LINC01881	ENST00000431796.5	565	5	-1	-2443	-1	2443	multi-exon	FALSE	canonical	1	14531	junction_3	24610.788908271512	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	118	630	45.0	-1	True	NA	NA
PB.6845.8	chr2	-	3655	7	novel_not_in_catalog	SP3	novel	6359	7	NA	NA	9	-1	any annotated donor/acceptor	FALSE	canonical	1	919	junction_6	178731.1611393554	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	713	2245	15.0	9	True	AATAAA	-22
PB.6916.10	chr2	-	2484	1	novel_in_catalog	STK17B	novel	1441	8	NA	NA	-3	-5731	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.3645.20	chr14	-	5859	23	incomplete-splice_match	DICER1	ENST00000343455.7	10277	27	-52	9123	12	-5	3prime_fragment	FALSE	canonical	1	56664	junction_22	65644.49069655364	NA	2	NA	TRUE	NA	NA	NA	C	coding	1705	5118	321	5438	20.0	7102	False	ATTAAA	-23
PB.3645.21	chr14	-	4622	24	novel_in_catalog	DICER1	novel	10277	27	NA	NA	30	3905	combination_of_known_junctions	FALSE	canonical	1	37694	junction_23	81648.08349063536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1384	4152	470	4621	60.0	-2	True	AGTAAA	-21
PB.3645.22	chr14	-	4441	22	incomplete-splice_match	DICER1	ENST00000343455.7	10277	27	-20	13575	-20	3905	3prime_fragment	FALSE	canonical	1	56664	junction_21	66883.39021195694	NA	0	NA	TRUE	NA	NA	NA	C	coding	1384	4152	289	4440	60.0	12	True	AGTAAA	-21
PB.3645.23	chr14	-	2096	12	novel_in_catalog	DICER1	novel	10277	27	NA	NA	10	-3374	combination_of_known_junctions	FALSE	canonical	1	37694	junction_11	82727.64967716318	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1671	426	2096	60.0	-3	True	NA	NA
PB.3645.24	chr14	-	1958	12	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-13	-3374	no_combination_of_known_junctions	FALSE	canonical	1	5198	junction_11	88530.8625748554	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1671	288	1958	60.0	7141	False	NA	NA
PB.7120.4	chr2	+	4289	6	incomplete-splice_match	LINC01881	ENST00000456398.5	1235	8	63	14556	0	3677	3prime_fragment	FALSE	canonical	1	31494	junction_1	18224.84868085329	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	114	443	75.0	3	True	NA	NA
PB.9677.2	chr5	+	4408	13	novel_not_in_catalog	CNOT6	novel	456	2	NA	NA	1	-1524	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	83352.42671278217	NA	0	NA	TRUE	NA	NA	NA	B	coding	557	1674	110	1783	35.0	22	True	AATAAA	-22
PB.7020.1	chr2	-	2150	7	full-splice_match	CNPPD1	ENST00000451647.1	919	7	-77	-1154	-9	0	multi-exon	FALSE	canonical	1	601669	junction_6	107882.56289042061	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	148	1461	5.0	-51	True	AATAAA	-15
PB.7020.3	chr2	-	1975	9	novel_not_in_catalog	CNPPD1	novel	2060	8	NA	NA	-49	-1	any annotated donor/acceptor	FALSE	canonical	1	14122	junction_8	254059.170809645	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	55	1287	10.0	-8	True	AATAAA	-14
PB.4637.3	chr17	+	2265	5	novel_not_in_catalog	FAM57A	novel	852	2	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_1	134793.08187806784	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	449	952	15.0	-7969	False	TTTAAA	-13
PB.4637.2	chr17	+	2155	5	full-splice_match	FAM57A	ENST00000308278.12	2412	5	120	137	-14	-6	multi-exon	FALSE	canonical	1	98091	junction_2	104973.15732128857	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	117	890	15.0	-7984	False	NA	NA
PB.4637.1	chr17	+	2209	5	full-splice_match	FAM57A	ENST00000308278.12	2412	5	121	82	-13	6	multi-exon	FALSE	canonical	1	98091	junction_2	104973.15732128857	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	116	889	20.0	-7983	False	TTTAAA	-20
PB.9480.3	chr5	-	3020	17	full-splice_match	HSPA9	ENST00000297185.8	2825	17	-20	-175	-5	175	multi-exon	FALSE	canonical	1	478276	junction_10	650464.7146484965	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	104	2143	30.0	-21	True	AATGAA	-25
PB.9480.4	chr5	-	3374	16	novel_in_catalog	HSPA9	novel	4727	17	NA	NA	0	-1	intron_retention	FALSE	canonical	1	478276	junction_9	553367.8049157861	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	99	1877	10.0	-16	True	AATAAA	-17
PB.9480.5	chr5	-	2876	17	novel_in_catalog	HSPA9	novel	4727	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	4473	junction_16	736935.3507348864	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	343	2175	10.0	-10	True	AATAAA	-17
PB.2337.1	chr11	+	2915	1	antisense	novelGene_HSPA8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	125	378	86	463	85.0	-6	True	NA	NA
PB.3507.4	chr14	+	3198	15	full-splice_match	MPP5	ENST00000555925.5	5006	15	-45	1853	36	-1853	multi-exon	FALSE	canonical	1	45650	junction_2	71706.52986621289	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	263	2188	20.0	-314	False	AATAAA	-22
PB.3507.5	chr14	+	2925	15	full-splice_match	MPP5	ENST00000261681.8	5552	15	271	2356	38	-2356	multi-exon	FALSE	canonical	1	86230	junction_2	65210.24597364955	NA	2	NA	TRUE	NA	NA	NA	C	coding	675	2028	391	2418	80.0	-312	False	NA	NA
PB.3507.6	chr14	+	3106	3	full-splice_match	MPP5	ENST00000556345.5	1163	3	-33	-1910	-33	1910	multi-exon	FALSE	canonical	1	86230	junction_2	3186.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	381	755	20.0	-11	True	ATTAAA	-15
PB.3507.7	chr14	+	4993	15	full-splice_match	MPP5	ENST00000555925.5	5006	15	5	8	5	-8	multi-exon	FALSE	canonical	1	45650	junction_2	71706.52986621289	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	213	2138	45.0	-7	True	AATAAA	-25
PB.3507.1	chr14	+	5286	15	full-splice_match	MPP5	ENST00000261681.8	5552	15	266	0	33	0	multi-exon	FALSE	canonical	1	86230	junction_2	65210.24597364955	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	396	2423	25.0	-317	False	AATAAA	-33
PB.3507.2	chr14	+	3322	15	full-splice_match	MPP5	ENST00000261681.8	5552	15	373	1857	44	-1857	multi-exon	FALSE	canonical	1	86230	junction_2	65210.24597364955	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	289	2316	30.0	10	True	AATAAA	-18
PB.3507.3	chr14	+	1707	11	incomplete-splice_match	MPP5	ENST00000261681.8	5552	15	267	18396	34	-18396	3prime_fragment	FALSE	canonical	1	86230	junction_2	72358.3686491065	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1311	395	1705	75.0	-316	False	NA	NA
PB.8673.10	chr4	+	2852	15	incomplete-splice_match	RGS12	ENST00000338806.4	3010	16	16253	-1	161	1	5prime_fragment	FALSE	canonical	1	33397	junction_1	51210.353304297954	NA	0	NA	TRUE	NA	NA	NA	B	coding	789	2370	261	2630	15.0	-1	True	GGGGCT	-43
PB.9246.7	chr5	+	3726	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-15	812	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	37	2100	25.0	-7	True	AATAAA	-29
PB.5714.1	chr19	+	2576	15	full-splice_match	CARM1	ENST00000344150.8	2722	15	144	2	-6	-2	multi-exon	FALSE	canonical	1	280296	junction_1	156549.2701471231	NA	5	NA	TRUE	NA	NA	NA	C	coding	424	1275	340	1614	90.0	-5558	False	NA	NA
PB.5714.2	chr19	+	2669	16	full-splice_match	CARM1	ENST00000327064.8	3330	16	310	351	-5	-2	multi-exon	TRUE	canonical	1	280296	junction_1	197742.27562962408	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	364	1707	90.0	-5582	False	NA	NA
PB.3360.10	chr14	-	1685	4	novel_in_catalog	SDR39U1	novel	1507	5	NA	NA	13	0	intron_retention	FALSE	canonical	1	59730	junction_3	230215.48202258008	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	654	1370	15.0	-15	True	AATAAA	-17
PB.5714.4	chr19	+	2792	16	novel_not_in_catalog	CARM1	novel	3330	16	NA	NA	460	-2	any annotated donor/acceptor	FALSE	canonical	1	4732	junction_1	241329.6518352346	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	109	1830	90.0	-5035	False	NA	NA
PB.5714.5	chr19	+	2722	15	novel_not_in_catalog	CARM1	novel	3330	16	NA	NA	461	-2	any annotated donor/acceptor	FALSE	canonical	1	4732	junction_1	215763.30421931748	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	108	1760	90.0	-5034	False	NA	NA
PB.9959.11	chr6	+	2026	4	novel_not_in_catalog	CDKN1A	novel	2102	3	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1011685.2314906165	NA	1	1	TRUE	NA	NA	NA	C	coding	132	399	91	489	30.0	0	True	NA	NA
PB.9959.10	chr6	+	2140	3	novel_not_in_catalog	CDKN1A	novel	2102	3	NA	NA	4	-7	any annotated donor/acceptor	FALSE	canonical	1	719	junction_1	913530.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	116	610	30.0	0	True	NA	NA
PB.2659.1	chr12	+	4978	4	novel_not_in_catalog	TMEM198B	novel	2924	5	NA	NA	140	10	intron_retention	FALSE	canonical	1	40496	junction_3	48776.58610440054	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	2278	2607	5.0	-1153	False	AATAAA	-29
PB.2659.3	chr12	+	1903	5	novel_in_catalog	TMEM198B	novel	2924	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	30503	junction_3	47340.486675651104	NA	3	NA	TRUE	NA	NA	NA	C	coding	51	156	494	649	25.0	2	True	AATAAA	-15
PB.2659.2	chr12	+	2264	3	full-splice_match	TMEM198B	ENST00000482378.6	2230	3	-39	5	25	-3	multi-exon	FALSE	canonical	1	37631	junction_1	55273.5	NA	12	NA	TRUE	NA	NA	NA	C	coding	105	318	456	773	25.0	-107	False	AATAAA	-14
PB.11295.10	chr8	+	2944	14	full-splice_match	OXR1	ENST00000312046.10	4406	14	0	1462	0	37	multi-exon	FALSE	canonical	1	63576	junction_13	91942.40439381589	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	134	2653	30.0	-2	True	NA	NA
PB.731.3	chr1	-	4812	22	novel_not_in_catalog	ARNT	novel	4887	22	NA	NA	2	-7	any annotated donor/acceptor	FALSE	canonical	1	50243	junction_3	89133.91133442557	NA	4	NA	TRUE	NA	NA	NA	C	coding	788	2367	137	2503	15.0	6	True	ATTAAA	-18
PB.6823.1	chr2	-	2366	1	antisense	novelGene_PPIG_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	-47	False	NA	NA
PB.8497.7	chr3	+	1777	11	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	332	17019	-2	1316	3prime_fragment	FALSE	canonical	1	293192	junction_1	180991.5160681572	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1656	120	1775	50.0	-14	True	NA	NA
PB.8387.11	chr3	-	1465	4	novel_not_in_catalog	CNBP	novel	1626	5	NA	NA	-22	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	2541993.038224447	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-23	False	AATAAA	-27
PB.11295.12	chr8	+	3653	15	novel_in_catalog	OXR1	novel	3599	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	63576	junction_14	86719.19224115953	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	133	2733	70.0	-1	True	AATATA	-15
PB.626.4	chr1	-	2931	7	full-splice_match	RSBN1	ENST00000615321.1	2418	7	-3	-510	1	4	multi-exon	FALSE	canonical	1	117252	junction_5	43636.14452492337	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	25	2289	70.0	-18	True	TTTAAA	-21
PB.11295.13	chr8	+	2881	15	novel_in_catalog	OXR1	novel	3599	15	NA	NA	1	-84	combination_of_known_junctions	FALSE	canonical	1	63576	junction_14	86719.19224115953	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	133	2733	30.0	-1	True	TTTAAA	-40
PB.626.1	chr1	-	6438	7	full-splice_match	RSBN1	ENST00000612242.4	6592	7	154	0	-1	0	multi-exon	FALSE	canonical	1	117252	junction_5	43636.14452492337	NA	8	NA	TRUE	NA	NA	NA	C	coding	754	2265	27	2291	35.0	-20	True	AATAAA	-21
PB.606.2	chr1	-	2874	3	intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9274	junction_2	19644.5	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	3280	False	NA	NA
PB.626.3	chr1	-	3638	7	full-splice_match	RSBN1	ENST00000615321.1	2418	7	-3	-1217	1	-15	multi-exon	FALSE	canonical	1	117252	junction_5	43636.14452492337	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	25	2289	90.0	-18	True	NA	NA
PB.9011.2	chr4	+	4601	7	full-splice_match	MMAA	ENST00000649156.1	5946	7	1	1344	1	267	multi-exon	FALSE	canonical	1	6883	junction_1	34527.67049491691	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	88	1344	90.0	1	True	NA	NA
PB.11295.14	chr8	+	1655	7	incomplete-splice_match	OXR1	ENST00000312046.10	4406	14	6	45624	6	88	3prime_fragment	FALSE	canonical	1	96670	junction_1	61910.27644749743	NA	6	NA	TRUE	NA	NA	NA	C	coding	509	1527	128	1654	60.0	4	True	ACTAAA	-5
PB.6689.2	chr2	+	3677	4	full-splice_match	BCL2L11	ENST00000393256.7	5086	4	-18	1427	-3	-1425	multi-exon	FALSE	canonical	1	83201	junction_1	14794.174131130883	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	292	888	30.0	-4	True	AGTAAA	-42
PB.11295.15	chr8	+	4451	15	novel_in_catalog	OXR1	novel	3599	15	NA	NA	9	-12	combination_of_known_junctions	FALSE	canonical	1	63576	junction_14	86719.19224115953	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	125	2725	70.0	7	True	ACTAAA	-24
PB.5948.1	chr19	-	3608	6	novel_not_in_catalog	ZNF566	novel	1154	2	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	1	55	junction_1	16884.304491450042	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	114	1373	25.0	-1	True	AATAAA	-17
PB.9957.14	chr6	+	2014	7	full-splice_match	SRSF3	ENST00000477442.6	1095	7	-29	-890	-5	152	multi-exon	FALSE	canonical	1	425361	junction_4	994781.9194921429	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	123	497	25.0	0	True	AATAAA	-27
PB.5948.3	chr19	-	3371	5	full-splice_match	ZNF566	ENST00000427002.1	584	5	-61	-2726	-37	-17	multi-exon	FALSE	canonical	1	10359	junction_2	12793.434888645035	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	173	1432	85.0	262	False	NA	NA
PB.1446.1	chr10	+	1711	8	full-splice_match	TSPAN15	ENST00000373290.6	1698	8	-5	-8	-5	8	multi-exon	FALSE	canonical	1	238917	junction_1	78649.74202430544	NA	2	NA	TRUE	NA	NA	NA	A	coding	294	885	128	1012	0.0	3	True	AATAAA	-33
PB.5948.5	chr19	-	2668	5	full-splice_match	ZNF566	ENST00000427002.1	584	5	-1	-2083	-1	1	multi-exon	FALSE	canonical	1	10359	junction_2	12793.434888645035	NA	1	1	TRUE	NA	NA	NA	C	coding	419	1260	113	1372	75.0	0	True	NA	NA
PB.5948.4	chr19	-	3321	5	full-splice_match	ZNF566	ENST00000424129.6	2644	5	-33	-644	-2	-17	multi-exon	FALSE	canonical	1	14046	junction_4	11295.501372227794	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	126	1382	85.0	-1	True	NA	NA
PB.9957.13	chr6	+	2058	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-6	2170	-5	652	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	123	617	5.0	0	True	ATTAAA	-15
PB.9957.12	chr6	+	2515	7	full-splice_match	SRSF3	ENST00000477442.6	1095	7	-29	-1391	-5	653	multi-exon	FALSE	canonical	1	425361	junction_4	994781.9194921429	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	123	497	10.0	0	True	ATTAAA	-16
PB.11295.17	chr8	+	1939	7	full-splice_match	OXR1	ENST00000297447.10	1944	7	0	5	0	-5	multi-exon	FALSE	canonical	1	23452	junction_1	103922.0656594001	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	138	869	80.0	0	True	NA	NA
PB.9401.7	chr5	-	3236	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	520	1	383	-1	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	126	536	35.0	519	False	AATAAA	-13
PB.1547.2	chr10	-	1570	1	genic	FRA10AC1	novel	NA	NA	NA	NA	-14	-15764	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	-4	True	NA	NA
PB.1547.1	chr10	-	4121	6	novel_in_catalog	FRA10AC1	novel	3089	14	NA	NA	24	-3826	intron_retention	FALSE	canonical	1	242781	junction_5	47659.00217755299	NA	1	NA	TRUE	NA	NA	NA	B	coding	127	384	175	558	90.0	34	True	NA	NA
PB.606.3	chr1	-	2543	1	full-splice_match	KCNA3	ENST00000369769.3	2569	1	23	3	23	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	575	1728	202	1929	30.0	-22	False	AATAAA	-13
PB.11295.19	chr8	+	2392	6	full-splice_match	OXR1	ENST00000449762.6	2621	6	112	117	17	-117	multi-exon	FALSE	canonical	1	51991	junction_1	107745.3236936063	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	121	771	20.0	-29	True	AATAAA	-20
PB.9401.1	chr5	-	3072	2	full-splice_match	TICAM2	ENST00000427199.2	3049	2	-24	1	-24	-1	multi-exon	FALSE	canonical	1	28117	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	235	708	467	1174	25.0	-25	True	AATAAA	-14
PB.8774.9	chr4	-	2821	5	novel_in_catalog	SGCB	novel	4431	6	NA	NA	-54	-1217	no_combination_of_known_junctions	FALSE	canonical	1	23943	junction_4	184115.75651390487	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	41	787	35.0	-29	True	ATTAAA	-12
PB.1333.1	chr10	-	4432	18	incomplete-splice_match	ARHGAP21	ENST00000396432.6	7167	26	104015	7	1716	-2	5prime_fragment	FALSE	canonical	1	1016	junction_2	57695.98988259818	NA	1	NA	TRUE	NA	NA	NA	B	coding	1173	3522	115	3636	30.0	5645	False	AATAAA	-14
PB.1333.3	chr10	-	1870	1	incomplete-splice_match	ARHGAP21	ENST00000396432.6	7167	26	138182	8	4556	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	222	669	407	1075	30.0	5452	False	AATAAA	-13
PB.9771.3	chr6	+	3356	3	intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	373	junction_2	78.5	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-186	False	NA	NA
PB.11146.1	chr8	-	2205	1	antisense	novelGene_SDCBP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9401.3	chr5	-	6813	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	107	-3163	-30	3163	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	275	949	35.0	4	True	NA	NA
PB.9401.2	chr5	-	3467	4	full-splice_match	TMED7-TICAM2	ENST00000333314.3	3453	4	-15	1	-15	-1	multi-exon	FALSE	canonical	1	30652	junction_1	336239.2180539854	NA	3	1	TRUE	NA	NA	NA	C	coding	235	708	863	1570	25.0	-20	True	AATAAA	-13
PB.4372.2	chr16	-	2124	2	full-splice_match	ZNF768	ENST00000562803.1	1999	2	1	-126	1	-6	multi-exon	FALSE	canonical	1	10134	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	85	1614	40.0	8150	False	AATAAA	-14
PB.4372.1	chr16	-	2251	2	full-splice_match	ZNF768	ENST00000380412.6	2315	2	58	6	58	-6	multi-exon	FALSE	canonical	1	362756	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	119	1741	40.0	34	True	AATAAA	-14
PB.6708.7	chr2	+	4540	13	novel_in_catalog	DDX18	novel	3796	14	NA	NA	38	-1516	intron_retention	FALSE	canonical	1	151172	junction_11	118223.9959794718	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	91	1164	30.0	-24	True	TATAAA	-15
PB.469.11	chr1	-	3024	11	full-splice_match	DEPDC1	ENST00000370966.9	4586	11	139	1423	0	-1	multi-exon	FALSE	canonical	1	16198	junction_6	40816.73155324909	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	84	1667	25.0	-1	True	AATAAA	-22
PB.469.10	chr1	-	4013	12	full-splice_match	DEPDC1	ENST00000456315.6	5331	12	11	1307	11	115	multi-exon	FALSE	canonical	1	16198	junction_7	38525.65264258595	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	105	2540	35.0	2	True	ATTAAA	-38
PB.469.13	chr1	-	2792	10	novel_in_catalog	DEPDC1	novel	5331	12	NA	NA	-10	-9	intron_retention	FALSE	canonical	1	13416	junction_9	43414.791488900315	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	532	1443	20.0	0	True	AATAAA	-14
PB.8497.4	chr3	+	1322	9	novel_in_catalog	SMC4	novel	708	6	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	6274	junction_1	241255.55383008154	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1254	68	1321	70.0	-14	True	AGTAAA	-26
PB.469.15	chr1	-	1539	10	incomplete-splice_match	DEPDC1	ENST00000370966.9	4586	11	108	3656	1	-911	3prime_fragment	FALSE	canonical	1	16198	junction_5	42327.06891562011	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1425	115	1539	80.0	-8	True	ATTAAA	-25
PB.469.14	chr1	-	2445	11	full-splice_match	DEPDC1	ENST00000370966.9	4586	11	141	2000	2	-578	multi-exon	FALSE	canonical	1	16198	junction_6	40816.73155324909	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	82	1665	35.0	1	True	NA	NA
PB.469.16	chr1	-	2321	11	incomplete-splice_match	DEPDC1	ENST00000456315.6	5331	12	33	3694	1	-949	3prime_fragment	FALSE	canonical	1	16198	junction_6	40101.68432173392	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2238	83	2320	60.0	0	True	AAAAAG	-37
PB.3519.5	chr14	-	2536	2	full-splice_match	ZFP36L1	ENST00000439696.2	3190	2	175	479	175	464	multi-exon	FALSE	canonical	1	1380988	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	338	1017	128	1144	70.0	-2	True	NA	NA
PB.3519.4	chr14	-	2733	2	full-splice_match	ZFP36L1	ENST00000439696.2	3190	2	174	283	174	-283	multi-exon	FALSE	canonical	1	1380988	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	129	1145	85.0	-3	True	AAAACA	-28
PB.3519.7	chr14	-	2036	2	full-splice_match	ZFP36L1	ENST00000439696.2	3190	2	173	981	173	-38	multi-exon	FALSE	canonical	1	1380988	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	130	1146	85.0	-4	True	NA	NA
PB.3519.6	chr14	-	4424	1	novel_in_catalog	ZFP36L1	novel	3190	2	NA	NA	174	-38	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	316	951	2584	3534	85.0	-3	True	NA	NA
PB.3519.1	chr14	-	2946	2	full-splice_match	ZFP36L1	ENST00000439696.2	3190	2	173	71	173	-71	multi-exon	FALSE	canonical	1	1380988	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	338	1017	130	1146	65.0	-4	True	NA	NA
PB.3519.3	chr14	-	2970	3	novel_not_in_catalog	ZFP36L1	novel	3094	2	NA	NA	154	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	690494.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	318	957	149	1105	40.0	3244	False	AATAAA	-13
PB.10936.3	chr7	+	4768	3	incomplete-splice_match	CHPF2	ENST00000035307.6	3978	4	-15	8	-5	0	intron_retention	FALSE	canonical	1	385757	junction_2	69205.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	3635	4630	25.0	-15	True	ATTAAA	-14
PB.10936.2	chr7	+	4203	5	novel_in_catalog	CHPF2	novel	548	2	NA	NA	-6	0	intron_retention	FALSE	canonical	1	3475	junction_3	230114.30610065837	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	3070	4065	25.0	-16	True	ATTAAA	-14
PB.10936.1	chr7	+	3813	3	novel_in_catalog	CHPF2	novel	548	2	NA	NA	-8	0	intron_retention	FALSE	canonical	1	44313	junction_2	239927.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	1532	3667	30.0	-18	True	ATTAAA	-22
PB.5972.1	chr19	+	1683	7	full-splice_match	SPINT2	ENST00000301244.11	1802	7	-50	169	-50	-6	multi-exon	FALSE	canonical	1	1807412	junction_1	572662.6953989194	NA	0	NA	TRUE	NA	NA	NA	A	coding	252	759	486	1244	35.0	-29	True	AATAAA	-20
PB.3519.9	chr14	-	1847	3	novel_not_in_catalog	ZFP36L1	novel	3094	2	NA	NA	174	-38	intron_retention	TRUE	non_canonical	0	0	junction_1	690494.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	129	647	85.0	-3	True	NA	NA
PB.3519.8	chr14	-	1974	3	novel_not_in_catalog	ZFP36L1	novel	3094	2	NA	NA	176	-38	intron_retention	FALSE	non_canonical	0	0	junction_1	690494.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	127	648	85.0	-1	True	NA	NA
PB.10936.5	chr7	+	3542	5	novel_not_in_catalog	CHPF2	novel	548	2	NA	NA	4	-9	intron_retention	FALSE	non_canonical	0	0	junction_4	192486.51822838787	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	1520	3496	15.0	-6	True	ATTAAA	-5
PB.10936.4	chr7	+	3984	4	full-splice_match	CHPF2	ENST00000035307.6	3978	4	-14	8	-4	0	multi-exon	FALSE	canonical	1	332326	junction_3	80839.91701436171	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	1528	3846	25.0	-14	True	ATTAAA	-14
PB.2813.9	chr12	+	2832	11	novel_in_catalog	VEZT	novel	571	6	NA	NA	-4	0	intron_retention	FALSE	canonical	1	14412	junction_2	138580.78816401644	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	76	2337	20.0	-527	False	AATAAA	-14
PB.2813.8	chr12	+	3102	14	novel_in_catalog	VEZT	novel	571	6	NA	NA	6	0	intron_retention	FALSE	canonical	1	3382	junction_2	150355.9237315237	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	400	2607	20.0	-533	False	AATAAA	-14
PB.8287.1	chr3	+	4544	33	full-splice_match	DZIP3	ENST00000361582.7	5350	33	-2	808	-2	6	multi-exon	FALSE	canonical	1	68687	junction_1	38068.79376350659	NA	0	NA	TRUE	NA	NA	NA	C	coding	1208	3627	233	3859	25.0	0	True	ATTAAA	-20
PB.8287.6	chr3	+	2168	15	novel_in_catalog	DZIP3	novel	5350	33	NA	NA	-2	7	no_combination_of_known_junctions	FALSE	canonical	1	4721	junction_14	32923.99240830372	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	233	2167	25.0	0	True	NA	NA
PB.8287.7	chr3	+	2985	16	incomplete-splice_match	DZIP3	ENST00000361582.7	5350	33	21	45920	-2	814	intron_retention	FALSE	canonical	1	68687	junction_1	25708.567306120607	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	210	2177	75.0	-318	False	AATAAA	-28
PB.8287.4	chr3	+	2577	16	novel_not_in_catalog	DZIP3	novel	5350	33	NA	NA	-161	7	any annotated donor/acceptor	FALSE	canonical	1	4122	junction_1	36366.08472861615	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	609	2576	25.0	4	True	NA	NA
PB.8287.5	chr3	+	4344	32	incomplete-splice_match	DZIP3	ENST00000361582.7	5350	33	-6	3468	-6	-9	3prime_fragment	FALSE	canonical	1	68687	junction_1	38486.580621449364	NA	0	NA	TRUE	NA	NA	NA	C	coding	1208	3627	237	3863	80.0	-4	True	NA	NA
PB.2813.1	chr12	+	3097	14	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	40760	junction_12	145498.28941957932	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	323	2044	15.0	0	True	AATAAA	-16
PB.7288.1	chr20	+	4254	1	novel_in_catalog	SNHG11	novel	1322	4	NA	NA	6	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	108	324	3930	4253	20.0	-1926	False	AATAAA	-6
PB.2813.3	chr12	+	2773	13	novel_not_in_catalog	VEZT	novel	571	6	NA	NA	1	-5	intron_retention	FALSE	non_canonical	0	0	junction_7	144124.89203147157	NA	9	1	TRUE	NA	NA	NA	C	coding	244	735	322	1056	40.0	1	True	AATAAA	-21
PB.2813.2	chr12	+	2764	13	novel_not_in_catalog	VEZT	novel	571	6	NA	NA	0	-6	intron_retention	TRUE	canonical	0	0	junction_6	140703.96748483044	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	1020	2522	40.0	0	True	AATAAA	-20
PB.2813.5	chr12	+	3020	13	novel_in_catalog	VEZT	novel	571	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	40760	junction_11	142832.59134820403	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	102	1967	15.0	4	True	AATAAA	-16
PB.2813.4	chr12	+	2698	12	novel_in_catalog	VEZT	novel	571	6	NA	NA	1	-6	intron_retention	FALSE	canonical	1	156688	junction_5	107207.03204062072	NA	3	NA	TRUE	NA	NA	NA	C	coding	783	2352	105	2456	40.0	1	True	AATAAA	-20
PB.2813.7	chr12	+	3049	14	novel_in_catalog	VEZT	novel	571	6	NA	NA	3	0	intron_retention	TRUE	canonical	1	6361	junction_5	155412.48667165535	NA	2	1	TRUE	NA	NA	NA	C	coding	625	1878	675	2552	15.0	3	True	AATAAA	-16
PB.2813.6	chr12	+	2559	14	novel_not_in_catalog	VEZT	novel	571	6	NA	NA	0	-4	intron_retention	FALSE	canonical	1	277	junction_3	158280.14810971444	NA	4	NA	TRUE	NA	NA	NA	C	coding	559	1677	881	2557	70.0	0	True	NA	NA
PB.1718.12	chr10	-	2934	5	full-splice_match	BNIP3	ENST00000540159.3	3066	5	-3	135	-3	-135	multi-exon	FALSE	canonical	1	351377	junction_1	54090.68978345534	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	121	663	40.0	-4	True	AATAAA	-14
PB.4108.8	chr15	-	2553	8	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	4	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	46780.42405510568	NA	1	1	TRUE	NA	NA	NA	C	coding	309	927	1626	2552	40.0	3	True	AATAAA	-17
PB.11000.1	chr8	-	2481	14	full-splice_match	ASAH1	ENST00000262097.11	2618	14	253	-116	-2	116	multi-exon	FALSE	canonical	1	671509	junction_9	286297.88506034005	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	60	1247	35.0	-11	True	ATTAAA	-16
PB.7148.1	chr20	-	3082	20	full-splice_match	SLC4A11	ENST00000642402.1	3046	20	-36	0	-9	0	multi-exon	FALSE	canonical	1	23468	junction_19	18311.871922236645	NA	0	NA	TRUE	NA	NA	NA	A	coding	875	2628	90	2717	10.0	332	False	AATAAA	-17
PB.2830.6	chr12	+	4189	18	full-splice_match	SCYL2	ENST00000360820.6	5779	18	8	1582	8	3	multi-exon	FALSE	canonical	1	32232	junction_5	90063.55593502236	NA	2	NA	TRUE	NA	NA	NA	C	coding	929	2790	430	3219	20.0	-1	True	AATAAA	-21
PB.7892.1	chr22	-	2067	1	novel_in_catalog	SCO2	novel	1002	2	NA	NA	-30	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	coding	327	984	1043	2026	15.0	6861	False	ATTAAA	-13
PB.1718.11	chr10	-	882	6	full-splice_match	BNIP3	ENST00000368636.8	2861	6	76	1903	-14	-130	multi-exon	FALSE	canonical	1	116557	junction_1	135179.48728324132	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	132	716	35.0	74	False	AATAAA	-19
PB.9863.11	chr6	+	2641	5	novel_not_in_catalog	TCF19	novel	3290	4	NA	NA	38	-437	any annotated donor/acceptor	FALSE	canonical	1	9893	junction_3	124792.91855184532	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	712	1314	30.0	-4	True	AATAAA	-24
PB.9863.10	chr6	+	3038	4	full-splice_match	TCF19	ENST00000376255.4	3039	4	0	1	0	-1	multi-exon	FALSE	canonical	1	50453	junction_1	115457.4193833669	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	504	1541	10.0	-42	True	NA	NA
PB.6391.10	chr2	+	2549	18	full-splice_match	WDR43	ENST00000407426.7	3533	18	40	944	40	609	multi-exon	FALSE	canonical	1	419891	junction_6	129950.9957138888	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	17	2050	60.0	-7	True	CATAAA	-29
PB.9536.7	chr5	-	4932	3	novel_not_in_catalog	SPRY4	novel	4938	3	NA	NA	-15	-72	any annotated donor/acceptor	FALSE	canonical	1	1616	junction_2	1038.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	299	900	338	1237	70.0	-1	True	NA	NA
PB.12046.5	chrX	+	3319	23	novel_in_catalog	RBM10	novel	3747	24	NA	NA	-58	0	no_combination_of_known_junctions	FALSE	canonical	1	29253	junction_5	241498.01216925672	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	1253	3106	5.0	0	True	AATAAA	-16
PB.12046.4	chrX	+	2148	17	incomplete-splice_match	RBM10	ENST00000628161.2	3105	23	-64	1723	-64	-1721	3prime_fragment	FALSE	canonical	1	64478	junction_3	175485.74390485356	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	397	2148	70.0	-6	True	NA	NA
PB.12046.7	chrX	+	2335	18	novel_in_catalog	RBM10	novel	3747	24	NA	NA	-20	-1721	combination_of_known_junctions	FALSE	canonical	1	259334	junction_3	152296.56275425668	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1983	353	2335	70.0	0	True	NA	NA
PB.12046.6	chrX	+	3158	23	novel_in_catalog	RBM10	novel	3747	24	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	57399	junction_1	253804.0835436943	NA	0	NA	TRUE	NA	NA	NA	C	coding	918	2757	189	2945	5.0	0	True	AATAAA	-16
PB.12046.1	chrX	+	2425	18	incomplete-splice_match	RBM10	ENST00000329236.8	3201	24	-244	1722	-76	-1721	3prime_fragment	TRUE	canonical	1	57399	junction_1	180004.57955039418	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2181	245	2425	70.0	-18	True	NA	NA
PB.9536.4	chr5	-	4667	2	novel_not_in_catalog	SPRY4	novel	4938	3	NA	NA	0	-71	any annotated donor/acceptor	FALSE	canonical	1	2256	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	266	801	171	971	75.0	14	False	NA	NA
PB.12046.3	chrX	+	3430	24	novel_in_catalog	RBM10	novel	3747	24	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	1	57399	junction_1	236412.47054638423	NA	0	NA	TRUE	NA	NA	NA	C	coding	994	2985	233	3217	5.0	-6	True	AATAAA	-16
PB.12046.2	chrX	+	3172	23	full-splice_match	RBM10	ENST00000345781.10	3108	23	-65	1	-65	0	multi-exon	FALSE	canonical	1	64478	junction_3	235783.57175435201	NA	1	1	TRUE	NA	NA	NA	C	coding	853	2562	398	2959	5.0	-7	True	AATAAA	-16
PB.8792.5	chr4	+	2599	10	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	450690.46799598995	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	560	1837	15.0	2	True	ATTAAA	-16
PB.8792.4	chr4	+	1501	9	full-splice_match	PAICS	ENST00000512576.2	6480	9	110	4869	110	211	multi-exon	FALSE	canonical	1	261279	junction_6	436555.357549518	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	52	1329	30.0	2	True	AATAAA	-21
PB.8792.7	chr4	+	2090	10	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	113	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	450690.46799598995	NA	25	2	TRUE	NA	NA	NA	C	coding	425	1278	49	1326	15.0	5	True	ATTAAA	-15
PB.8792.6	chr4	+	1520	9	full-splice_match	PAICS	ENST00000512576.2	6480	9	108	4852	108	228	multi-exon	FALSE	canonical	1	261279	junction_6	436555.357549518	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	54	1331	30.0	0	True	AATAAA	-38
PB.12046.9	chrX	+	3363	24	novel_not_in_catalog	RBM10	novel	3747	24	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	3604	junction_13	244046.53172893586	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	331	3150	5.0	22	True	AATAAA	-16
PB.12046.8	chrX	+	3352	24	novel_in_catalog	RBM10	novel	3747	24	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	259334	junction_3	217755.39817836555	NA	1	1	TRUE	NA	NA	NA	C	coding	929	2790	350	3139	5.0	3	True	AATAAA	-16
PB.8792.3	chr4	+	2325	11	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	451309.09824558155	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	156	1511	15.0	-5	True	ATTAAA	-16
PB.8792.2	chr4	+	2081	10	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	110	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	450690.46799598995	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	52	1329	10.0	2	True	ATTAAA	-17
PB.10706.1	chr7	+	4687	4	full-splice_match	ZNF655	ENST00000493277.5	1815	4	-142	-2730	-2	-2	multi-exon	FALSE	canonical	1	46322	junction_2	86876.15120772022	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	354	1820	45.0	0	True	NA	NA
PB.10706.2	chr7	+	3762	4	full-splice_match	ZNF655	ENST00000493277.5	1815	4	-132	-1815	-6	0	multi-exon	FALSE	canonical	1	46322	junction_2	86876.15120772022	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	230	1810	85.0	-267	False	NA	NA
PB.10706.3	chr7	+	4561	3	full-splice_match	ZNF655	ENST00000252713.8	2535	3	17	-2043	0	0	multi-exon	FALSE	canonical	1	50759	junction_2	102934.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	221	1696	50.0	0	True	NA	NA
PB.10706.4	chr7	+	1803	4	full-splice_match	ZNF655	ENST00000467680.5	1979	4	173	3	0	-1	multi-exon	FALSE	canonical	1	178294	junction_2	31988.765448027043	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	765	1160	20.0	0	True	NA	NA
PB.10706.5	chr7	+	1406	5	full-splice_match	ZNF655	ENST00000320583.9	1601	5	193	2	4	0	multi-exon	FALSE	canonical	1	118853	junction_3	50698.42906528268	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	217	762	20.0	4	True	NA	NA
PB.5663.1	chr19	+	2037	14	full-splice_match	MCOLN1	ENST00000264079.10	2082	14	18	27	9	-8	multi-exon	TRUE	canonical	1	98119	junction_1	47685.876834916155	NA	0	NA	TRUE	NA	NA	NA	A	coding	580	1743	108	1850	35.0	20	True	AATAAA	-5
PB.10706.7	chr7	+	2836	4	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	26	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	110963.22045014134	NA	1	1	TRUE	NA	NA	NA	C	coding	491	1476	195	1670	85.0	-232	False	NA	NA
PB.2431.5	chr12	+	3103	20	full-splice_match	USP5	ENST00000389231.9	3083	20	-11	-9	9	0	multi-exon	FALSE	canonical	1	543154	junction_1	154100.80671256265	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2508	44	2551	25.0	-13	True	AATAAA	-13
PB.2431.4	chr12	+	2928	21	novel_not_in_catalog	USP5	novel	3181	20	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	11	junction_20	236756.9480740956	NA	1	1	TRUE	NA	NA	NA	C	coding	921	2766	47	2812	20.0	-16	True	AATAAA	-12
PB.2431.6	chr12	+	2901	21	novel_not_in_catalog	USP5	novel	3181	20	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	274331.30336454493	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2577	20	2596	25.0	11	True	AATAAA	-13
PB.2431.1	chr12	+	2993	21	novel_not_in_catalog	USP5	novel	3181	20	NA	NA	-23	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	236758.80127439296	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	76	2583	20.0	-45	False	AATAAA	-12
PB.7948.19	chr3	-	3074	20	full-splice_match	NUP210	ENST00000420141.2	3134	20	45	15	45	-15	multi-exon	FALSE	non_canonical	0	0	junction_13	119612.36157292704	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	39	2942	85.0	27	True	NA	NA
PB.2431.3	chr12	+	3178	20	full-splice_match	USP5	ENST00000229268.12	3181	20	3	0	3	0	multi-exon	FALSE	canonical	1	131758	junction_15	214224.06764271512	NA	1	1	TRUE	NA	NA	NA	C	coding	858	2577	50	2626	25.0	-19	True	AATAAA	-13
PB.2431.2	chr12	+	3248	19	novel_in_catalog	USP5	novel	3181	20	NA	NA	-19	0	intron_retention	FALSE	canonical	1	17429	junction_14	245304.44612607863	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	72	1919	25.0	-41	False	AATAAA	-13
PB.5925.1	chr19	+	1886	9	full-splice_match	LSR	ENST00000354900.7	2105	9	218	1	-12	0	multi-exon	FALSE	canonical	1	413342	junction_4	130114.88101169482	NA	0	NA	TRUE	NA	NA	NA	A	coding	582	1749	34	1782	30.0	-1632	False	AATAAA	-14
PB.3008.8	chr12	-	2546	14	novel_not_in_catalog	SCARB1	novel	3329	12	NA	NA	-42	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	310285.2596328229	NA	28	2	TRUE	NA	NA	NA	C	coding	509	1530	240	1769	15.0	-18	True	AATAAA	-16
PB.3008.9	chr12	-	4105	2	novel_not_in_catalog	SCARB1	novel	3329	12	NA	NA	4138	-7	any annotated donor/acceptor	FALSE	canonical	1	1783	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-6
PB.3008.6	chr12	-	2552	12	full-splice_match	SCARB1	ENST00000339570.9	3329	12	4	773	4	4	multi-exon	FALSE	canonical	1	92470	junction_1	229775.38316540766	NA	1	NA	TRUE	NA	NA	NA	C	coding	506	1521	194	1714	15.0	5	True	AATAAA	-17
PB.3008.7	chr12	-	2571	12	novel_in_catalog	SCARB1	novel	3329	12	NA	NA	-2	4	no_combination_of_known_junctions	FALSE	canonical	1	8486	junction_7	271522.776948305	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	200	964	15.0	-1	True	AATAAA	-17
PB.3008.4	chr12	-	2657	14	novel_not_in_catalog	SCARB1	novel	3329	12	NA	NA	-18	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	258660.16170698582	NA	2	1	TRUE	NA	NA	NA	C	coding	509	1530	216	1745	15.0	6	True	AATAAA	-17
PB.3008.5	chr12	-	2608	13	full-splice_match	SCARB1	ENST00000546215.5	1597	13	-141	-870	-7	4	multi-exon	FALSE	canonical	1	21718	junction_2	249835.67817300768	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	205	1650	15.0	-6	True	AATAAA	-17
PB.3008.2	chr12	-	2751	14	novel_in_catalog	SCARB1	novel	3329	12	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	1	6993	junction_12	312700.6436462722	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	426	1793	15.0	-2	True	AATAAA	-17
PB.3008.3	chr12	-	2665	13	full-splice_match	SCARB1	ENST00000261693.10	2611	13	-94	40	-24	-40	multi-exon	FALSE	canonical	1	382099	junction_2	178130.7399786858	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	222	1751	50.0	0	True	AATAGA	-21
PB.3008.1	chr12	-	3487	13	full-splice_match	SCARB1	ENST00000261693.10	2611	13	-102	-774	-32	-3	multi-exon	FALSE	canonical	1	382099	junction_2	178130.7399786858	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	230	1759	20.0	-8	True	NA	NA
PB.6265.10	chr19	+	2326	8	full-splice_match	ZNF274	ENST00000617501.4	2538	8	111	101	-6	17	multi-exon	FALSE	canonical	1	46045	junction_1	48984.252763265766	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	68	2029	55.0	0	True	AATAAA	-27
PB.6265.11	chr19	+	2541	8	novel_not_in_catalog	ZNF274	novel	2539	5	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	6749	junction_2	79866.56698289124	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	255	812	20.0	1	True	AATAAA	-21
PB.9218.3	chr5	+	1675	5	full-splice_match	MRPS30	ENST00000507110.5	1678	5	20	-17	20	17	multi-exon	FALSE	canonical	1	416440	junction_1	180276.04887279813	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	169	1338	20.0	-4	True	NA	NA
PB.11560.1	chr9	-	3327	7	intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.1161.2	chr1	-	3253	5	novel_in_catalog	AL117348.2	novel	1625	8	NA	NA	-15	-33182	intron_retention	FALSE	canonical	1	777757	junction_4	275746.28479126876	NA	2	NA	TRUE	NA	NA	NA	B	coding	143	432	1642	2073	15.0	-44	True	AATAAA	-18
PB.9218.2	chr5	+	1444	5	full-splice_match	MRPS30	ENST00000507110.5	1678	5	20	214	20	-214	multi-exon	FALSE	canonical	1	416440	junction_1	180276.04887279813	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	169	1338	35.0	-4	True	ATTAAA	-19
PB.4406.1	chr16	+	1649	7	novel_not_in_catalog	ORC6	novel	681	7	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	2588	junction_1	140768.1910238918	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	60	842	25.0	-38	True	AATAAA	-16
PB.8773.8	chr4	+	2093	10	full-splice_match	DCUN1D4	ENST00000381441.7	4207	10	82	2032	-8	511	multi-exon	FALSE	canonical	1	55642	junction_8	90023.69940942232	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	99	872	15.0	-8	True	AATAAA	-16
PB.4406.2	chr16	+	1588	7	full-splice_match	ORC6	ENST00000219097.6	1628	7	39	1	3	-1	multi-exon	FALSE	canonical	1	263152	junction_1	59441.20103771084	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	22	780	25.0	0	True	AATAAA	-17
PB.8773.9	chr4	+	2802	11	novel_in_catalog	DCUN1D4	novel	2293	9	NA	NA	-6	511	intron_retention	FALSE	canonical	1	19051	junction_6	100850.38859022805	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	97	528	15.0	-6	True	AATAAA	-16
PB.11004.10	chr8	-	2159	3	novel_not_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	85784	-2	any annotated donor/acceptor	FALSE	canonical	1	5731	junction_2	80734.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	108	327	216	542	25.0	NA	False	AATAAA	-18
PB.11004.11	chr8	-	3784	10	novel_not_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	30	-44	any annotated donor/acceptor	FALSE	canonical	1	2080	junction_8	68227.09605102327	NA	2	NA	TRUE	NA	NA	NA	B	coding	530	1593	617	2209	30.0	-1	True	ATTAAA	-18
PB.11004.12	chr8	-	2622	9	novel_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	-2	510	combination_of_known_junctions	FALSE	canonical	1	26935	junction_8	46740.561086571266	NA	1	NA	TRUE	NA	NA	NA	B	coding	530	1593	520	2112	75.0	-3	True	AATAAA	-10
PB.10191.1	chr6	+	3780	1	intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.6864.5	chr2	+	4123	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	99	3542	-25	1876	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	4	NA	TRUE	NA	NA	NA	C	coding	658	1977	48	2024	15.0	-30	True	NA	NA
PB.3353.1	chr14	-	2073	7	full-splice_match	DHRS1	ENST00000561273.5	2027	7	-9	-37	-1	-1	multi-exon	FALSE	canonical	1	234578	junction_5	64317.758137279285	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	215	748	15.0	-20	True	AATAAA	-19
PB.3353.3	chr14	-	1800	8	novel_in_catalog	DHRS1	novel	1181	2	NA	NA	-19	0	intron_retention	FALSE	canonical	1	9523	junction_3	121415.41702698523	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	233	766	20.0	-38	True	AATAAA	-18
PB.3353.2	chr14	-	2638	6	novel_in_catalog	DHRS1	novel	1181	2	NA	NA	-9	0	intron_retention	FALSE	canonical	1	234578	junction_4	49225.659972823116	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	223	756	20.0	-28	True	AATAAA	-18
PB.3353.4	chr14	-	1412	9	full-splice_match	DHRS1	ENST00000288111.11	1480	9	65	3	1	-1	multi-exon	FALSE	canonical	1	234578	junction_7	62017.44393502827	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	213	1154	15.0	-18	True	AATAAA	-17
PB.5673.1	chr19	-	5458	6	full-splice_match	ELAVL1	ENST00000407627.6	6015	6	-61	618	-10	-618	multi-exon	FALSE	canonical	1	114946	junction_5	350748.651086444	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	192	1172	55.0	-29	True	AATAAA	-25
PB.5673.2	chr19	-	2332	6	full-splice_match	ELAVL1	ENST00000407627.6	6015	6	-13	3696	-13	884	multi-exon	FALSE	canonical	1	114946	junction_5	350748.651086444	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	144	1124	15.0	19	True	ATTAAA	-20
PB.5673.3	chr19	-	2317	7	novel_not_in_catalog	ELAVL1	novel	6015	6	NA	NA	-7	884	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	436939.91310196824	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	189	1169	15.0	-26	True	ATTAAA	-20
PB.5673.4	chr19	-	2276	6	novel_not_in_catalog	ELAVL1	novel	6015	6	NA	NA	4	884	any annotated donor/acceptor	FALSE	canonical	1	19069	junction_2	427063.30391612905	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	178	1068	15.0	-15	True	ATTAAA	-20
PB.5673.5	chr19	-	2267	7	novel_not_in_catalog	ELAVL1	novel	6015	6	NA	NA	-24	884	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	436939.91310196824	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	155	1135	15.0	8	True	ATTAAA	-20
PB.5673.6	chr19	-	2210	7	novel_not_in_catalog	ELAVL1	novel	6015	6	NA	NA	-13	884	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	436939.91310196824	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	144	1124	15.0	19	True	ATTAAA	-20
PB.5673.8	chr19	-	2146	5	novel_in_catalog	ELAVL1	novel	6015	6	NA	NA	-2	884	no_combination_of_known_junctions	FALSE	canonical	1	18988	junction_1	434544.21231755865	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	184	642	15.0	-21	True	ATTAAA	-20
PB.10730.2	chr7	+	2222	5	novel_not_in_catalog	PCOLCE	novel	1702	9	NA	NA	-29	0	intron_retention	FALSE	canonical	1	6888	junction_2	514008.9474126399	NA	0	NA	TRUE	NA	NA	NA	B	coding	104	315	1840	2154	25.0	-8131	False	AATAAA	-14
PB.10730.1	chr7	+	2187	5	novel_in_catalog	PCOLCE	novel	1702	9	NA	NA	-119	0	intron_retention	FALSE	canonical	1	876227	junction_1	99263.27649740361	NA	0	NA	TRUE	NA	NA	NA	B	coding	273	822	1298	2119	25.0	2	True	AATAAA	-14
PB.9540.24	chr5	-	2593	2	incomplete-splice_match	NR3C1	ENST00000503201.1	2594	9	53	116565	53	2028	3prime_fragment	FALSE	canonical	1	64849	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	130	1317	95.0	-10	True	NA	NA
PB.9540.25	chr5	-	2348	1	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	129	2028	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	310	933	140	1072	95.0	-1	True	NA	NA
PB.7259.10	chr20	-	3657	7	full-splice_match	UQCC1	ENST00000397554.5	3638	7	-20	1	-18	-1	multi-exon	FALSE	canonical	1	247096	junction_6	74275.35144630568	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	32	697	15.0	-22	True	NA	NA
PB.7259.11	chr20	-	3561	6	incomplete-splice_match	UQCC1	ENST00000424405.5	758	9	-21	40120	-18	-1	3prime_fragment	FALSE	canonical	1	18282	junction_4	161743.4859268218	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	32	601	15.0	-22	True	NA	NA
PB.7259.12	chr20	-	3467	5	novel_in_catalog	UQCC1	novel	1987	7	NA	NA	0	-1	intron_retention	FALSE	canonical	1	11187	junction_2	183025.47654681164	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	1083	1718	15.0	-1	True	NA	NA
PB.7259.13	chr20	-	2916	8	full-splice_match	UQCC1	ENST00000491125.5	990	8	-17	-1909	-17	-1	multi-exon	FALSE	canonical	1	1952	junction_1	148178.70997838097	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	31	1167	15.0	-21	True	NA	NA
PB.7259.14	chr20	-	3570	6	incomplete-splice_match	UQCC1	ENST00000443429.5	692	8	-17	37445	-11	-8	3prime_fragment	FALSE	canonical	1	11187	junction_2	158932.20153939855	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	1193	1828	30.0	-15	True	NA	NA
PB.7259.15	chr20	-	1989	7	full-splice_match	UQCC1	ENST00000397554.5	3638	7	-13	1662	-11	-56	multi-exon	FALSE	canonical	1	247096	junction_6	74275.35144630568	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	25	690	45.0	-15	True	AATAAA	-16
PB.7259.16	chr20	-	1573	8	novel_in_catalog	UQCC1	novel	1987	7	NA	NA	-11	-56	intron_retention	FALSE	canonical	1	3628	junction_1	147659.4602734444	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	25	648	45.0	-15	True	AATAAA	-16
PB.7259.17	chr20	-	2151	4	incomplete-splice_match	UQCC1	ENST00000491125.5	990	8	-11	34104	-11	1794	3prime_fragment	FALSE	canonical	1	247096	junction_3	75766.8545224244	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	25	486	85.0	-15	True	NA	NA
PB.6041.1	chr19	-	2180	9	full-splice_match	CADM4	ENST00000222374.2	2178	9	-7	5	-7	-5	multi-exon	FALSE	canonical	1	95185	junction_8	134021.58220506876	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	57	1223	20.0	-29	True	ATTAAA	-11
PB.5650.3	chr19	-	2729	22	novel_in_catalog	DENND1C	novel	2446	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2674	junction_21	51557.637225195824	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	160	2433	45.0	-1	True	AATAAA	-17
PB.5650.2	chr19	-	2796	23	full-splice_match	DENND1C	ENST00000381480.6	2816	23	19	1	-2	0	multi-exon	FALSE	canonical	1	37399	junction_22	47395.124458361264	NA	1	NA	TRUE	NA	NA	NA	C	coding	801	2406	95	2500	45.0	-3	True	AATAAA	-17
PB.5650.5	chr19	-	2550	23	full-splice_match	DENND1C	ENST00000381480.6	2816	23	21	245	0	46	multi-exon	FALSE	canonical	1	37399	junction_22	47395.124458361264	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	93	2498	30.0	-1	True	AATAAA	-14
PB.5650.4	chr19	-	2651	22	novel_in_catalog	DENND1C	novel	2446	11	NA	NA	0	46	intron_retention	FALSE	canonical	1	1498	junction_15	56319.77812412007	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	710	2599	30.0	-1	True	AATAAA	-14
PB.5650.7	chr19	-	2441	21	full-splice_match	DENND1C	ENST00000543576.5	2395	21	0	-46	0	46	multi-exon	FALSE	canonical	1	426	junction_20	52493.7159328619	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	116	2389	30.0	-1	True	AATAAA	-14
PB.5650.6	chr19	-	2489	22	novel_in_catalog	DENND1C	novel	2446	11	NA	NA	-4	46	combination_of_known_junctions	FALSE	canonical	1	2674	junction_21	51557.637225195824	NA	1	1	TRUE	NA	NA	NA	C	coding	757	2274	164	2437	30.0	-5	True	AATAAA	-14
PB.10538.1	chr7	-	6729	19	novel_in_catalog	TNS3	novel	5070	2	NA	NA	-29	5	combination_of_known_junctions	FALSE	canonical	1	1907	junction_18	75170.20240612485	NA	0	NA	TRUE	NA	NA	NA	B	coding	1002	3009	794	3802	20.0	-18	False	AATAAA	-22
PB.5650.8	chr19	-	2558	22	novel_in_catalog	DENND1C	novel	2446	11	NA	NA	-2	45	combination_of_known_junctions	FALSE	canonical	1	815	junction_21	57991.55537202913	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	1452	2507	30.0	-1	True	AATAAA	-13
PB.10538.3	chr7	-	4765	12	novel_not_in_catalog	TNS3	novel	5070	2	NA	NA	-47820	-3	any annotated donor/acceptor	FALSE	canonical	1	39655	junction_11	76199.01087447221	NA	2	NA	TRUE	NA	NA	NA	B	coding	548	1647	200	1846	25.0	157	False	AATAAA	-14
PB.10538.4	chr7	-	2308	1	incomplete-splice_match	TNS3	ENST00000428457.1	5070	2	2854	3	2854	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	101	False	AATAAA	-14
PB.10509.4	chr7	+	3763	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	43	-438	34	438	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	137	1381	15.0	0	True	NA	NA
PB.8257.5	chr3	+	1890	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	56366.66000252277	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	266	1261	25.0	-53	True	NA	NA
PB.6342.2	chr2	-	2038	9	full-splice_match	LDAH	ENST00000381090.7	2045	9	26	-19	1	3	multi-exon	FALSE	canonical	1	597	junction_2	56874.80632274716	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	55	1167	10.0	12	True	TTTAAA	-13
PB.6342.3	chr2	-	3802	6	full-splice_match	LDAH	ENST00000626491.2	1179	6	-29	-2594	0	-3	multi-exon	FALSE	canonical	1	12019	junction_4	54249.94577177014	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	97	930	15.0	-30	False	TTTAAA	-7
PB.6342.4	chr2	-	3936	7	novel_in_catalog	LDAH	novel	3663	5	NA	NA	1	-4	intron_retention	FALSE	canonical	1	11881	junction_5	50740.02266921273	NA	4	NA	TRUE	NA	NA	NA	C	coding	331	996	70	1065	20.0	-3	True	TTTAAA	-6
PB.10509.7	chr7	+	1711	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	47	1610	38	-8	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	133	1377	45.0	4	True	AGTAAA	-7
PB.6342.6	chr2	-	3551	7	full-splice_match	LDAH	ENST00000237822.7	2907	7	-2	-642	-2	0	multi-exon	FALSE	canonical	1	99451	junction_6	22146.691405765836	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	83	1060	85.0	-16	True	NA	NA
PB.8257.4	chr3	+	1809	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	0	77	0	-77	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	290	1285	40.0	-7	True	ATTAAA	-22
PB.6342.8	chr2	-	2678	7	novel_in_catalog	LDAH	novel	3663	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	18162	junction_3	51629.08535812606	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	68	568	85.0	-1	True	NA	NA
PB.8268.7	chr3	+	2159	6	incomplete-splice_match	TFG	ENST00000620299.4	1289	8	165	9563	24	5249	3prime_fragment	FALSE	canonical	1	356923	junction_1	294048.41292712325	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	270	1061	75.0	-22	True	NA	NA
PB.10509.6	chr7	+	2590	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	43	735	34	-735	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	137	1381	35.0	0	True	ATTAAA	-20
PB.11256.14	chr8	+	785	2	incomplete-splice_match	MTDH	ENST00000522313.1	672	5	-603	30006	11	-30006	3prime_fragment	FALSE	canonical	1	758764	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	468	318	785	65.0	6	True	NA	NA
PB.3542.26	chr14	-	2916	10	novel_in_catalog	NUMB	novel	3607	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	95239	junction_8	129497.63823824722	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	235	2013	30.0	-34	True	AATAAA	-31
PB.7668.21	chr22	-	3966	14	novel_in_catalog	HPS4	novel	471	4	NA	NA	3	-17	combination_of_known_junctions	FALSE	canonical	1	14531	junction_8	97018.73830336246	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	1502	2833	35.0	-10	True	AATAAA	-19
PB.7668.20	chr22	-	4227	11	novel_in_catalog	HPS4	novel	471	4	NA	NA	7	-17	intron_retention	FALSE	canonical	1	15956	junction_1	99081.43907861855	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	2005	3159	35.0	30	False	AATAAA	-19
PB.7668.23	chr22	-	3994	15	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	1521	-17	any annotated donor/acceptor	FALSE	canonical	1	1644	junction_9	109206.15845115221	NA	1	1	TRUE	NA	NA	NA	C	coding	488	1467	1395	2861	35.0	-21	True	AATAAA	-19
PB.7668.22	chr22	-	4078	15	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	2	-17	any annotated donor/acceptor	FALSE	canonical	1	608	junction_8	106297.71445229014	NA	5	NA	TRUE	NA	NA	NA	C	coding	443	1332	1614	2945	35.0	25	False	AATAAA	-19
PB.7668.25	chr22	-	3936	15	novel_in_catalog	HPS4	novel	471	4	NA	NA	-5	-17	combination_of_known_junctions	FALSE	canonical	1	21377	junction_6	95338.93729923226	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	623	2803	35.0	34	False	AATAAA	-19
PB.7668.24	chr22	-	3969	15	novel_in_catalog	HPS4	novel	471	4	NA	NA	-7	-17	combination_of_known_junctions	FALSE	canonical	1	19007	junction_8	102942.11602762446	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	1505	2836	35.0	32	False	AATAAA	-19
PB.7668.26	chr22	-	3850	14	full-splice_match	HPS4	ENST00000398145.6	4497	14	27	620	-2	-17	multi-exon	FALSE	canonical	1	54662	junction_6	83798.35278309332	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	591	2717	35.0	-3	True	AATAAA	-19
PB.7668.29	chr22	-	3615	12	novel_in_catalog	HPS4	novel	471	4	NA	NA	3	-17	combination_of_known_junctions	FALSE	canonical	1	15956	junction_1	97168.1897175806	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	598	2547	35.0	-10	True	AATAAA	-19
PB.7668.28	chr22	-	3817	14	novel_in_catalog	HPS4	novel	471	4	NA	NA	1	-17	no_combination_of_known_junctions	FALSE	canonical	1	2610	junction_11	112076.99590948482	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	1353	2684	35.0	-29	True	AATAAA	-19
PB.8268.4	chr3	+	2036	9	novel_in_catalog	TFG	novel	1289	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1396	junction_1	458036.19316190504	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	402	1604	25.0	-211	False	AATAAA	-14
PB.6950.3	chr2	+	3199	1	full-splice_match	FZD7	ENST00000286201.2	3859	1	652	8	652	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	332	999	136	1134	45.0	-4836	False	AATAAA	-14
PB.6950.2	chr2	+	3479	1	full-splice_match	FZD7	ENST00000286201.2	3859	1	-403	783	-403	-783	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	574	1725	465	2189	75.0	-5891	False	AATAAA	-13
PB.6950.1	chr2	+	4261	1	full-splice_match	FZD7	ENST00000286201.2	3859	1	-407	5	-407	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	574	1725	469	2193	35.0	-5895	False	AATAAA	-17
PB.645.1	chr1	-	3550	6	full-splice_match	TRIM45	ENST00000256649.8	3515	6	-21	-14	13	14	multi-exon	FALSE	canonical	1	60656	junction_1	14642.543869150606	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	549	2291	40.0	-13	True	AATAAA	-36
PB.9580.9	chr5	-	2114	15	full-splice_match	FAM114A2	ENST00000520667.5	2121	15	0	7	0	-7	multi-exon	FALSE	canonical	1	5208	junction_13	69492.56174143932	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	127	1644	50.0	-12	True	AATAAA	-13
PB.8257.3	chr3	+	2223	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	246	-583	26	-309	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	44	1039	45.0	-3	True	TTTAAA	-7
PB.1241.1	chr1	-	1639	6	novel_not_in_catalog	SMYD3	novel	1458	12	NA	NA	5	132867	any annotated donor/acceptor	FALSE	canonical	1	1875	junction_1	81933.08775336128	NA	1	NA	TRUE	NA	NA	NA	A	coding	181	546	91	636	30.0	10	False	ATTAAA	-17
PB.8257.2	chr3	+	2625	11	full-splice_match	ST3GAL6	ENST00000469105.5	2837	11	208	4	-1	-4	multi-exon	FALSE	canonical	1	25999	junction_1	56619.436935472964	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	399	1136	35.0	-30	True	AATAAA	-20
PB.645.3	chr1	-	2409	6	full-splice_match	TRIM45	ENST00000256649.8	3515	6	-20	1126	14	-1	multi-exon	FALSE	canonical	1	60656	junction_1	14642.543869150606	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	548	2290	20.0	-12	True	ATTAAA	-21
PB.645.2	chr1	-	3473	6	full-splice_match	TRIM45	ENST00000369464.7	3495	6	14	8	14	-8	multi-exon	FALSE	canonical	1	4278	junction_4	32622.76269478108	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	548	2236	50.0	-12	True	AATAAA	-14
PB.11185.22	chr8	-	3889	12	full-splice_match	STAU2	ENST00000355780.9	4061	12	0	172	0	10	multi-exon	FALSE	canonical	1	57923	junction_1	80314.49220192389	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	220	1659	25.0	-1	True	AATAAA	-24
PB.11021.5	chr8	+	2055	10	novel_not_in_catalog	SORBS3	novel	3459	21	NA	NA	-30	-1	intron_retention	FALSE	canonical	1	29333	junction_1	238438.24524855462	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	300	1289	5.0	-24	True	AATAAA	-15
PB.3396.4	chr14	-	3169	5	novel_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	-15	-1	no_combination_of_known_junctions	FALSE	canonical	1	3570	junction_3	106455.05780022855	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-36	True	AATAAA	-20
PB.11021.1	chr8	+	1977	10	full-splice_match	SORBS3	ENST00000523965.5	2028	10	50	1	-41	-1	multi-exon	FALSE	canonical	1	241241	junction_1	184031.33888478993	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	222	1211	5.0	-4	True	AATAAA	-15
PB.11021.3	chr8	+	2124	10	novel_in_catalog	SORBS3	novel	3459	21	NA	NA	-50	-2	intron_retention	FALSE	canonical	1	25133	junction_1	239578.81316119837	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	370	1359	5.0	-5	True	AATAAA	-14
PB.3396.5	chr14	-	3595	9	novel_not_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	8	-2	any annotated donor/acceptor	FALSE	canonical	1	17	junction_7	107859.05068421472	NA	2	NA	TRUE	NA	NA	NA	C	coding	101	306	616	921	20.0	-53	True	AATAAA	-19
PB.8257.9	chr3	+	2770	12	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	26	-4	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	61155.67043994104	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	544	1281	35.0	-3	True	AATAAA	-20
PB.3396.6	chr14	-	3368	7	novel_not_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	-6	-3	any annotated donor/acceptor	FALSE	canonical	1	5025	junction_6	110178.232728712	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	471	833	25.0	-3	True	AATAAA	-18
PB.1040.14	chr1	-	4414	26	full-splice_match	KDM5B	ENST00000648338.1	9485	26	53	5018	1	0	multi-exon	FALSE	canonical	1	203318	junction_25	103943.57165873413	NA	0	NA	TRUE	NA	NA	NA	C	coding	1433	4299	116	4414	70.0	0	True	AAGAAA	-13
PB.9504.2	chr5	+	1408	6	full-splice_match	ZMAT2	ENST00000274712.7	1647	6	112	127	-18	-127	multi-exon	FALSE	canonical	1	653776	junction_1	273315.7080971381	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	16	615	80.0	-2	True	NA	NA
PB.1049.5	chr1	+	1777	6	incomplete-splice_match	ATP2B4	ENST00000367218.7	8918	22	8	43169	8	-26844	3prime_fragment	FALSE	canonical	1	293508	junction_1	67429.77429474313	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	888	890	1777	60.0	0	True	NA	NA
PB.3396.1	chr14	-	3255	6	full-splice_match	TRAPPC6B	ENST00000330149.9	3242	6	-14	1	-7	-1	multi-exon	FALSE	canonical	1	220549	junction_1	18989.25201265179	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	281	718	20.0	-4	True	AATAAA	-20
PB.1224.1	chr1	+	2863	6	full-splice_match	EDARADD	ENST00000359362.5	3097	6	28	206	-5	-129	multi-exon	FALSE	canonical	1	22036	junction_4	4909.498084325933	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	1320	2486	95.0	3	True	NA	NA
PB.1224.2	chr1	+	3077	6	full-splice_match	EDARADD	ENST00000359362.5	3097	6	7	13	7	-13	multi-exon	FALSE	canonical	1	22036	junction_4	4909.498084325933	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	1341	2507	70.0	-18	True	AATAAA	-19
PB.9246.2	chr5	+	3052	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-20	-157	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	332	2395	25.0	-4	True	ACTAAA	-15
PB.3396.2	chr14	-	3337	6	full-splice_match	TRAPPC6B	ENST00000555269.5	1000	6	-32	-2305	8	-1	multi-exon	FALSE	canonical	1	36552	junction_4	84143.74038512906	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-53	True	AATAAA	-20
PB.6292.2	chr2	-	1151	8	novel_not_in_catalog	AC108488.2	novel	421	3	NA	NA	-10372	-13594	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	175701.98376866692	NA	3	1	TRUE	NA	NA	NA	B	coding	176	531	70	600	35.0	0	True	AATAAA	-21
PB.3396.3	chr14	-	3217	5	novel_in_catalog	TRAPPC6B	novel	4533	5	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	36552	junction_3	92878.91788506151	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-17	True	AATAAA	-20
PB.6292.1	chr2	-	1615	8	full-splice_match	RNASEH1	ENST00000315212.3	1887	8	284	-12	0	12	multi-exon	TRUE	canonical	1	76465	junction_6	162595.91485944408	NA	0	NA	TRUE	NA	NA	NA	A	coding	286	861	73	933	90.0	-3	True	NA	NA
PB.10708.4	chr7	+	3490	4	full-splice_match	ZSCAN25	ENST00000493443.5	558	4	11	-2943	-2	4	multi-exon	FALSE	canonical	1	1311	junction_1	42628.88795432297	NA	5	NA	TRUE	NA	NA	NA	C	coding	328	987	113	1099	10.0	11	True	NA	NA
PB.10708.5	chr7	+	4388	9	novel_in_catalog	ZSCAN25	novel	5722	7	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	1	3153	junction_1	37334.473551389136	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	385	2019	40.0	13	True	NA	NA
PB.10708.2	chr7	+	2983	8	novel_not_in_catalog	ZSCAN25	novel	5722	7	NA	NA	0	38556	any annotated donor/acceptor	FALSE	canonical	1	17358	junction_7	27848.145972801296	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	310	1170	25.0	13	True	NA	NA
PB.10708.3	chr7	+	2798	8	full-splice_match	ZSCAN25	ENST00000394152.6	4349	8	-5	1556	-3	-53	multi-exon	FALSE	canonical	1	46114	junction_1	16639.373835353694	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	333	1967	55.0	-10	True	AATAAA	-15
PB.10708.1	chr7	+	4325	8	full-splice_match	ZSCAN25	ENST00000394152.6	4349	8	5	19	0	-11	multi-exon	FALSE	canonical	1	46114	junction_1	16639.373835353694	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	323	1957	40.0	0	True	NA	NA
PB.11277.1	chr8	+	3225	1	antisense	novelGene_ZNF706_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-2	True	NA	NA
PB.7900.2	chr22	-	2315	10	novel_not_in_catalog	RABL2B	novel	1126	10	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_8	94175.55468942951	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	352	1038	20.0	0	True	AGTAAA	-24
PB.1212.7	chr1	-	931	5	full-splice_match	TOMM20	ENST00000366607.4	3387	5	67	2389	67	300	multi-exon	FALSE	canonical	1	7316	junction_3	277648.9865729749	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	155	592	75.0	1	True	NA	NA
PB.1212.6	chr1	-	1073	5	full-splice_match	TOMM20	ENST00000366607.4	3387	5	65	2249	65	440	multi-exon	FALSE	canonical	1	7316	junction_3	277648.9865729749	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	157	594	35.0	-1	True	ATTAAA	-25
PB.1212.5	chr1	-	3347	6	novel_in_catalog	TOMM20	novel	3387	5	NA	NA	97	-11	combination_of_known_junctions	FALSE	canonical	1	7316	junction_4	300546.4356585185	NA	1	NA	TRUE	NA	NA	NA	C	coding	90	273	125	397	25.0	-3	True	NA	NA
PB.1212.2	chr1	-	3215	5	full-splice_match	TOMM20	ENST00000366607.4	3387	5	99	73	99	-73	multi-exon	FALSE	canonical	1	7316	junction_3	277648.9865729749	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	123	560	45.0	-1	True	NA	NA
PB.1212.1	chr1	-	4097	5	full-splice_match	TOMM20	ENST00000366607.4	3387	5	65	-775	65	775	multi-exon	FALSE	canonical	1	7316	junction_3	277648.9865729749	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	157	594	100.0	-1	True	NA	NA
PB.11791.2	chr9	-	2968	10	full-splice_match	MAPKAP1	ENST00000394063.5	2977	10	9	0	6	0	multi-exon	FALSE	canonical	1	28457	junction_9	289613.6277955319	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	498	1475	15.0	-18	True	AATAAA	-18
PB.7812.3	chr22	-	2507	12	novel_not_in_catalog	RANGAP1	novel	3469	17	NA	NA	32	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	397881.5869724547	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	391	1512	40.0	-33	True	AATAAA	-21
PB.7812.2	chr22	-	2880	16	full-splice_match	RANGAP1	ENST00000356244.7	3060	16	179	1	-107	-1	multi-exon	FALSE	canonical	1	446749	junction_15	261355.69159396546	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	126	1889	40.0	114	False	AATAAA	-17
PB.7812.1	chr22	-	3482	16	novel_in_catalog	RANGAP1	novel	3469	17	NA	NA	23	3	no_combination_of_known_junctions	FALSE	canonical	1	30542	junction_15	336790.11835374404	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	559	2487	40.0	-42	False	AATAAA	-21
PB.7812.7	chr22	-	4188	15	novel_in_catalog	RANGAP1	novel	3469	17	NA	NA	60	-1	intron_retention	FALSE	canonical	1	446749	junction_14	262961.04081408243	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	245	1855	40.0	-5	True	AATAAA	-17
PB.7812.6	chr22	-	2980	17	novel_not_in_catalog	RANGAP1	novel	3469	17	NA	NA	32	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	361344.4325206248	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	273	1988	35.0	-33	True	AATAAA	-18
PB.7812.5	chr22	-	2938	16	novel_not_in_catalog	RANGAP1	novel	3469	17	NA	NA	23	1	any annotated donor/acceptor	FALSE	canonical	1	27669	junction_15	337363.24766179785	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	182	1945	35.0	-42	False	AATAAA	-19
PB.7812.4	chr22	-	2870	15	novel_in_catalog	RANGAP1	novel	3469	17	NA	NA	57	2	combination_of_known_junctions	FALSE	canonical	1	10979	junction_10	383580.7923614433	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	248	1876	35.0	-8	True	AATAAA	-20
PB.2253.3	chr11	-	2375	8	incomplete-splice_match	CASP4	ENST00000444739.6	2158	9	855	702	0	-695	3prime_fragment	FALSE	canonical	1	543888	junction_7	95931.09076300339	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	57	1190	80.0	-19	True	NA	NA
PB.2253.2	chr11	-	3079	8	novel_in_catalog	CASP4	novel	684	4	NA	NA	-9	0	intron_retention	FALSE	canonical	1	543888	junction_7	95931.09076300339	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	66	1199	25.0	-28	True	AATAAA	-10
PB.2253.1	chr11	-	1289	9	full-splice_match	CASP4	ENST00000444739.6	2158	9	862	7	1	0	multi-exon	FALSE	canonical	1	460306	junction_1	121053.71763808	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	50	1183	25.0	-12	True	AATAAA	-10
PB.49.8	chr1	+	2907	3	full-splice_match	KCNAB2	ENST00000481789.1	916	3	378	-2369	378	0	multi-exon	FALSE	canonical	1	465288	junction_2	21143.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	37	114	189	302	10.0	-4407	False	AATAAA	-15
PB.49.4	chr1	+	2394	15	full-splice_match	KCNAB2	ENST00000602612.5	2396	15	13	-11	13	-2	multi-exon	TRUE	canonical	1	163596	junction_2	158084.5033051782	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	166	1353	10.0	0	True	AATAAA	-29
PB.49.5	chr1	+	3385	9	incomplete-splice_match	KCNAB2	ENST00000458166.6	1336	14	41351	-2324	5204	0	5prime_fragment	FALSE	canonical	1	454468	junction_6	64450.28578182858	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	172	780	10.0	-9826	False	AATAAA	-15
PB.49.1	chr1	+	3826	15	full-splice_match	KCNAB2	ENST00000378092.5	1202	15	-14	-2610	14	5	multi-exon	FALSE	canonical	1	201942	junction_1	139364.1637106922	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	155	1216	5.0	-20	True	AATAAA	-20
PB.49.2	chr1	+	3848	15	full-splice_match	KCNAB2	ENST00000352527.5	4165	15	315	2	8	-2	multi-exon	FALSE	canonical	1	251088	junction_2	125533.18144587698	NA	4	NA	TRUE	NA	NA	NA	C	coding	353	1062	171	1232	10.0	-5	True	AATAAA	-26
PB.49.3	chr1	+	3874	16	full-splice_match	KCNAB2	ENST00000341524.5	4207	16	320	13	13	0	multi-exon	FALSE	canonical	1	163596	junction_2	152939.96966095336	NA	6	NA	TRUE	NA	NA	NA	C	coding	367	1104	166	1269	10.0	0	True	AATAAA	-15
PB.6802.33	chr2	-	5604	35	full-splice_match	LY75	ENST00000263636.4	6886	35	-46	1328	-7	-1328	multi-exon	FALSE	canonical	1	81987	junction_34	34508.33240129856	NA	0	NA	TRUE	NA	NA	NA	C	coding	1722	5169	75	5243	25.0	-1	True	ATTAAA	-20
PB.11791.5	chr9	-	3079	11	full-splice_match	MAPKAP1	ENST00000373503.7	3045	11	-35	1	-13	-1	multi-exon	FALSE	canonical	1	48274	junction_10	270016.0427610923	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	610	1587	20.0	-40	False	AATAAA	-17
PB.9580.8	chr5	-	2192	15	novel_in_catalog	FAM114A2	novel	4443	14	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	1	22022	junction_14	65583.9687610782	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	205	1722	50.0	5	True	AATAAA	-13
PB.11791.4	chr9	-	3257	11	full-splice_match	MAPKAP1	ENST00000350766.7	3256	11	-2	1	-2	-1	multi-exon	FALSE	canonical	1	337009	junction_4	196098.99032886425	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	305	1765	20.0	2	True	AATAAA	-17
PB.825.1	chr1	-	3082	1	incomplete-splice_match	MEF2D	ENST00000464356.6	5598	10	16619	3	12969	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	112	339	1163	1501	10.0	1680	False	ATTAAA	-23
PB.2939.4	chr12	-	3111	21	novel_in_catalog	TAOK3	novel	4301	21	NA	NA	2	-17	combination_of_known_junctions	FALSE	canonical	1	12872	junction_20	128166.0237149066	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	392	3088	95.0	-26	True	ATTAAA	-17
PB.2939.5	chr12	-	3181	21	full-splice_match	TAOK3	ENST00000392533.7	4384	21	29	1174	-23	-18	multi-exon	FALSE	canonical	1	145199	junction_20	112935.93106601415	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	463	3159	95.0	-10	True	ATTAAA	-16
PB.2939.7	chr12	-	3187	21	novel_not_in_catalog	TAOK3	novel	4301	21	NA	NA	-2	-18	any annotated donor/acceptor	FALSE	canonical	1	25888	junction_8	134273.23363031071	NA	1	NA	TRUE	NA	NA	NA	C	coding	907	2724	442	3165	95.0	11	True	ATTAAA	-16
PB.2939.1	chr12	-	3325	22	novel_in_catalog	TAOK3	novel	4301	21	NA	NA	13	-17	combination_of_known_junctions	FALSE	canonical	1	27209	junction_20	153726.5819885048	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	606	3302	95.0	539	False	ATTAAA	-17
PB.2939.2	chr12	-	3070	21	novel_in_catalog	TAOK3	novel	4301	21	NA	NA	30	-17	combination_of_known_junctions	FALSE	canonical	1	43801	junction_20	124174.47183317308	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	351	3047	95.0	-2	True	ATTAAA	-17
PB.2939.3	chr12	-	3115	21	full-splice_match	TAOK3	ENST00000419821.6	4301	21	13	1173	13	-17	multi-exon	FALSE	canonical	1	20326	junction_20	127182.82852201392	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	396	3092	95.0	-15	True	ATTAAA	-17
PB.2939.8	chr12	-	3358	22	novel_in_catalog	TAOK3	novel	4301	21	NA	NA	-23	-18	combination_of_known_junctions	FALSE	canonical	1	27209	junction_20	146129.19269507474	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	640	3336	95.0	-10	True	ATTAAA	-16
PB.6990.4	chr2	-	8664	47	full-splice_match	FN1	ENST00000323926.10	8708	47	0	44	0	-40	multi-exon	FALSE	canonical	1	2230192	junction_22	2723971.704094946	NA	0	NA	TRUE	NA	NA	NA	C	coding	2446	7341	267	7607	35.0	-1	True	AATAAA	-12
PB.4507.4	chr16	-	2375	5	full-splice_match	SLC7A6OS	ENST00000263997.10	4189	5	-3	1817	-2	-1686	multi-exon	FALSE	canonical	1	159860	junction_3	33931.67672323312	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	23	952	45.0	-3	True	ATTAAA	-20
PB.11891.2	chr9	+	2088	10	novel_not_in_catalog	RXRA	novel	5215	3	NA	NA	5461	245	any annotated donor/acceptor	FALSE	canonical	1	23904	junction_1	173566.34826806467	NA	2	1	TRUE	NA	NA	NA	B	coding	435	1308	131	1438	40.0	-10	True	NA	NA
PB.4507.6	chr16	-	1630	5	full-splice_match	SLC7A6OS	ENST00000263997.10	4189	5	-23	2582	-22	1383	multi-exon	FALSE	canonical	1	159860	junction_3	33931.67672323312	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	43	972	50.0	-23	False	AGTAAA	-19
PB.4507.1	chr16	-	4066	5	full-splice_match	SLC7A6OS	ENST00000263997.10	4189	5	-3	126	-2	5	multi-exon	FALSE	canonical	1	159860	junction_3	33931.67672323312	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	23	952	25.0	-3	True	AATAAA	-32
PB.11891.5	chr9	+	4907	10	novel_not_in_catalog	RXRA	novel	5215	3	NA	NA	5469	-494	any annotated donor/acceptor	FALSE	canonical	1	23904	junction_1	173566.34826806467	NA	3	NA	TRUE	NA	NA	NA	B	coding	435	1308	123	1430	65.0	-2	True	AGTAAA	-35
PB.4507.3	chr16	-	2623	5	full-splice_match	SLC7A6OS	ENST00000263997.10	4189	5	-1	1567	0	-1436	multi-exon	FALSE	canonical	1	159860	junction_3	33931.67672323312	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	21	950	35.0	-1	True	ATTAAA	-13
PB.4507.2	chr16	-	6549	3	full-splice_match	SLC7A6OS	ENST00000568538.2	910	3	-121	-5518	2	-6	multi-exon	FALSE	canonical	1	159860	junction_1	5589.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	18	749	40.0	2	True	AATAAA	-21
PB.1159.1	chr1	+	1659	9	full-splice_match	EPHX1	ENST00000272167.9	1660	9	1	0	1	0	multi-exon	FALSE	canonical	1	608180	junction_1	326778.2533569209	NA	0	NA	TRUE	NA	NA	NA	A	coding	455	1368	80	1447	35.0	1	True	GATAAA	-13
PB.5750.4	chr19	-	3876	23	novel_in_catalog	AC010422.3	novel	838	5	NA	NA	-18346	-2682	intron_retention	FALSE	canonical	1	500649	junction_12	244403.25903675504	NA	0	NA	TRUE	NA	NA	NA	B	coding	383	1152	2618	3769	15.0	-2	True	ATTAAA	-19
PB.11705.10	chr9	+	2129	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	-8	1998	-8	-1993	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	360	1589	25.0	-8	True	TATAAA	-22
PB.11705.11	chr9	+	1809	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	0	2310	0	-2305	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	352	1581	35.0	0	True	AATATA	-8
PB.9567.4	chr5	-	3722	14	novel_in_catalog	DCTN4	novel	4208	13	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	1	1637	junction_13	155947.6471144864	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	110	1321	5.0	626	False	AATAAA	-15
PB.7927.3	chr3	+	2220	2	full-splice_match	CRELD1	ENST00000491527.1	360	2	-691	-1169	-8	1169	multi-exon	FALSE	canonical	1	344062	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-41	True	AATAAA	-16
PB.9567.6	chr5	-	4347	13	novel_in_catalog	DCTN4	novel	4208	13	NA	NA	17	-1	intron_retention	FALSE	canonical	1	9318	junction_12	120626.62852775179	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	736	1947	5.0	612	False	AATAAA	-14
PB.9567.7	chr5	-	4332	12	novel_not_in_catalog	DCTN4	novel	4208	13	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	166762.23528695226	NA	5	2	TRUE	NA	NA	NA	C	coding	317	954	979	1932	5.0	611	False	AATAAA	-14
PB.7927.6	chr3	+	2184	11	full-splice_match	CRELD1	ENST00000452070.5	1778	11	-8	-398	-3	-16	multi-exon	FALSE	canonical	1	111000	junction_1	91338.91332263594	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	104	1366	35.0	-18	True	NA	NA
PB.9567.1	chr5	-	4068	12	novel_in_catalog	DCTN4	novel	4208	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	376234	junction_11	38396.477201960355	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1218	1667	5.0	-13	True	AATAAA	-15
PB.9567.2	chr5	-	3807	13	full-splice_match	DCTN4	ENST00000447998.6	4208	13	93	308	4	0	multi-exon	FALSE	canonical	1	376234	junction_12	36848.73822315886	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	24	1406	5.0	-11	True	AATAAA	-15
PB.9567.3	chr5	-	3780	12	novel_in_catalog	DCTN4	novel	4208	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	17707	junction_9	122379.3870074964	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	516	1379	5.0	198	False	AATAAA	-15
PB.7927.8	chr3	+	2123	10	full-splice_match	CRELD1	ENST00000383811.7	2696	10	188	385	172	-4	multi-exon	FALSE	canonical	1	212315	junction_4	63763.305739001895	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	412	1674	40.0	4	True	AATAAA	-19
PB.473.8	chr1	+	2503	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-23	-675	-23	394	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	4	NA	TRUE	NA	NA	NA	C	coding	405	1218	168	1385	40.0	-19	True	AATAAA	-14
PB.9313.2	chr5	+	3388	1	incomplete-splice_match	JMY	ENST00000396137.4	9042	11	87633	6	23579	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-18
PB.9313.1	chr5	+	5434	1	incomplete-splice_match	JMY	ENST00000396137.4	9042	11	85591	2	21537	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-22
PB.8297.1	chr3	-	1263	12	full-splice_match	ATG3	ENST00000283290.9	1570	12	299	8	-12	5	multi-exon	FALSE	canonical	1	653082	junction_10	176426.08187126493	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	137	1081	25.0	-14	True	AATAAA	-10
PB.2243.4	chr11	+	4779	24	full-splice_match	ARHGAP42	ENST00000298815.12	4752	24	-388	361	-365	-361	multi-exon	FALSE	canonical	1	10206	junction_11	13137.031935404346	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	392	3016	30.0	-1	True	AATAAA	-29
PB.2243.5	chr11	+	8153	24	full-splice_match	ARHGAP42	ENST00000298815.12	4752	24	-388	-3013	-365	-3	multi-exon	FALSE	canonical	1	10206	junction_11	13137.031935404346	NA	8	NA	TRUE	NA	NA	NA	C	coding	874	2625	392	3016	20.0	-1	True	AATAAA	-17
PB.8923.1	chr4	+	2137	1	antisense	novelGene_LEF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.473.3	chr1	+	1865	12	novel_not_in_catalog	CTH	novel	2044	11	NA	NA	-3	-64	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48260.626338953574	NA	11	1	TRUE	NA	NA	NA	C	coding	296	891	596	1486	30.0	1	True	TTTAAA	-17
PB.473.4	chr1	+	5061	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-54	-3202	0	2921	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	5	NA	TRUE	NA	NA	NA	C	coding	405	1218	199	1416	10.0	4	True	CATAAA	-15
PB.2243.1	chr11	+	4126	24	full-splice_match	ARHGAP42	ENST00000298815.12	4752	24	-320	946	-297	-946	multi-exon	FALSE	canonical	1	10206	junction_11	13137.031935404346	NA	4	NA	TRUE	NA	NA	NA	C	coding	874	2625	324	2948	20.0	23	False	AATAAA	-21
PB.2243.2	chr11	+	5989	24	full-splice_match	ARHGAP42	ENST00000298815.12	4752	24	-444	-793	-421	793	multi-exon	FALSE	canonical	1	10206	junction_11	13137.031935404346	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	448	3072	35.0	-26	True	AGTAAA	-27
PB.2243.3	chr11	+	3256	24	full-splice_match	ARHGAP42	ENST00000298815.12	4752	24	-442	1938	-419	118	multi-exon	FALSE	canonical	1	10206	junction_11	13137.031935404346	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	446	3070	5.0	-24	True	AAAAAG	-20
PB.392.8	chr1	-	4433	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	-65	1399	-65	-1399	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	1043	2530	30.0	-26	True	AATAAA	-30
PB.11623.1	chr9	-	2272	4	full-splice_match	C9orf64	ENST00000376344.7	2443	4	167	4	167	-1	multi-exon	FALSE	canonical	1	161752	junction_1	6538.400280054917	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	51	1076	35.0	191	False	AATAAA	-19
PB.11275.28	chr8	-	2731	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	-36	-38	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	808730.995599639	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	139	876	30.0	-12	True	NA	NA
PB.11275.27	chr8	-	3235	8	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	8	-38	intron_retention	FALSE	canonical	1	9976	junction_2	801922.7473510788	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	529	1266	30.0	-2	True	NA	NA
PB.392.1	chr1	-	5823	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	-56	0	-56	0	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	1034	2521	20.0	-17	True	AATAAA	-22
PB.8122.1	chr3	-	4578	7	novel_not_in_catalog	IP6K1	novel	4456	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1505	junction_5	156602.66652441	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	444	1751	15.0	-1	True	AATAAA	-15
PB.392.3	chr1	-	4744	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	1021	2	1021	-2	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	8	NA	TRUE	NA	NA	NA	C	coding	402	1209	236	1444	30.0	1060	False	AATAAA	-20
PB.3469.3	chr14	+	4659	31	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	27496	junction_1	25557.16365998648	NA	1	NA	TRUE	NA	NA	NA	B	coding	1463	4392	143	4534	75.0	0	True	NA	NA
PB.11275.21	chr8	-	2836	6	full-splice_match	YWHAZ	ENST00000353245.7	2829	6	-49	42	-2	-42	multi-exon	FALSE	canonical	1	9976	junction_2	750454.7415845942	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	134	871	25.0	-12	True	NA	NA
PB.392.7	chr1	-	4256	10	novel_in_catalog	EFCAB14	novel	5767	11	NA	NA	-79	-1398	combination_of_known_junctions	FALSE	canonical	1	112291	junction_8	170322.10009998447	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	1057	2352	30.0	-40	True	AATAAA	-31
PB.4598.28	chr16	-	3591	3	novel_in_catalog	SLC7A5	novel	3983	10	NA	NA	-17	-5580	intron_retention	FALSE	canonical	1	1488895	junction_2	342936.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	84	857	100.0	-1	True	NA	NA
PB.4598.29	chr16	-	9084	2	incomplete-splice_match	SLC7A5	ENST00000261622.4	4537	10	-17	13364	-17	-10655	3prime_fragment	FALSE	canonical	1	1488895	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	311	936	84	1019	100.0	-1	True	NA	NA
PB.8764.1	chr4	-	2501	10	full-splice_match	GABRA2	ENST00000381620.8	2525	10	-200	224	-89	0	multi-exon	FALSE	canonical	1	16449	junction_6	5214.579947099417	NA	1	NA	TRUE	NA	NA	NA	A	coding	451	1356	405	1760	80.0	-1	True	NA	NA
PB.4974.7	chr17	+	2419	3	incomplete-splice_match	EIF1	ENST00000469257.1	2330	4	610	9	-400	-9	5prime_fragment	FALSE	canonical	1	6511328	junction_2	1277978.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	1363	1722	30.0	-41	True	NA	NA
PB.4974.6	chr17	+	667	4	full-splice_match	EIF1	ENST00000469257.1	2330	4	-7	1670	1	-1	multi-exon	FALSE	canonical	1	2585693	junction_1	2665719.8567811954	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	154	495	20.0	-1	True	AATAAA	-13
PB.4974.5	chr17	+	2019	3	novel_in_catalog	EIF1	novel	2170	2	NA	NA	0	-5	intron_retention	FALSE	canonical	1	6511328	junction_2	1277978.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	155	385	35.0	-2	True	AATAAA	-13
PB.4974.4	chr17	+	2165	2	full-splice_match	EIF1	ENST00000462917.1	2170	2	0	5	0	-5	multi-exon	FALSE	canonical	1	6511328	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	155	385	35.0	-2	True	AATAAA	-13
PB.4598.24	chr16	-	4030	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-2358	-2	any annotated donor/acceptor	FALSE	canonical	1	15	junction_9	797246.4134665078	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	360	1085	10.0	3507	False	AAGAAA	-14
PB.4974.2	chr17	+	2757	1	novel_in_catalog	EIF1	novel	2170	2	NA	NA	0	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	76	231	155	385	35.0	-2	True	AATAAA	-13
PB.4974.1	chr17	+	1310	4	full-splice_match	EIF1	ENST00000469257.1	2330	4	-7	1027	1	-5	multi-exon	FALSE	canonical	1	2585693	junction_1	2665719.8567811954	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	154	495	35.0	-1	True	AATAAA	-13
PB.4598.27	chr16	-	1950	10	full-splice_match	SLC7A5	ENST00000261622.4	4537	10	-41	2628	-41	81	multi-exon	FALSE	canonical	1	1488895	junction_9	437047.0731744981	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	108	1631	35.0	-25	False	TTTAAA	-22
PB.3993.1	chr15	-	4094	13	full-splice_match	PTPN9	ENST00000618819.4	7813	13	-193	3912	-193	-36	multi-exon	FALSE	canonical	1	132759	junction_12	61451.816222312205	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	737	2488	35.0	107	False	NA	NA
PB.11400.1	chr8	+	2062	14	novel_in_catalog	ADCK5	novel	782	6	NA	NA	-32	0	intron_retention	TRUE	canonical	1	4682	junction_11	39097.95940800264	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	87	1064	30.0	-37	False	NA	NA
PB.3993.6	chr15	-	2005	12	incomplete-splice_match	PTPN9	ENST00000306726.6	3862	14	-13	2753	-13	-70	intron_retention	FALSE	canonical	1	132759	junction_11	63996.85535779044	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1449	557	2005	25.0	12	True	NA	NA
PB.3993.5	chr15	-	2988	14	novel_not_in_catalog	PTPN9	novel	7813	13	NA	NA	-161	710	intron_retention	TRUE	non_canonical	0	0	junction_13	93617.46734216927	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	619	2370	20.0	21	True	NA	NA
PB.3993.4	chr15	-	3833	13	novel_not_in_catalog	PTPN9	novel	7813	13	NA	NA	-130	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	115524.90065950667	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	585	2192	30.0	52	True	TATAAA	-15
PB.635.66	chr1	-	2617	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-55	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	1903842.5219584152	NA	4	2	TRUE	NA	NA	NA	C	coding	622	1869	592	2460	75.0	-1	True	NA	NA
PB.9671.1	chr5	-	2998	8	full-splice_match	MRNIP	ENST00000518235.5	1244	8	-57	-1697	-3	196	multi-exon	FALSE	canonical	1	40609	junction_1	57309.90018152472	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	68	757	10.0	-4	True	NA	NA
PB.3469.9	chr14	+	5464	31	novel_not_in_catalog	KIAA0586	novel	5226	34	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	306	junction_30	34514.42669134492	NA	23	3	TRUE	NA	NA	NA	B	coding	1591	4776	547	5322	30.0	-9	True	AATAAA	-14
PB.7948.4	chr3	-	2554	8	novel_not_in_catalog	NUP210	novel	7193	40	NA	NA	15894	5	any annotated donor/acceptor	FALSE	canonical	1	2053	junction_7	277642.7234269221	NA	1	1	TRUE	NA	NA	NA	C	coding	330	993	111	1103	15.0	2582	False	AATAAA	-25
PB.5750.7	chr19	-	3226	24	novel_not_in_catalog	AC010422.3	novel	838	5	NA	NA	-18357	-2682	any annotated donor/acceptor	FALSE	canonical	1	1498	junction_23	330160.83503884904	NA	1	NA	TRUE	NA	NA	NA	B	coding	1021	3066	54	3119	15.0	-13	True	ATTAAA	-19
PB.5369.1	chr18	+	1411	3	full-splice_match	TGIF1	ENST00000343820.9	2076	3	597	68	89	-6	multi-exon	FALSE	canonical	1	409926	junction_1	91832.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	272	819	190	1008	45.0	0	True	AATAAA	-17
PB.4058.1	chr15	+	897	6	full-splice_match	MRPS11	ENST00000325844.8	3644	6	236	2511	11	-1	multi-exon	FALSE	canonical	1	594475	junction_1	133151.30332760548	NA	0	NA	TRUE	NA	NA	NA	A	coding	194	585	30	614	25.0	14	True	AATAAA	-17
PB.5718.23	chr19	+	3203	14	incomplete-splice_match	LDLR	ENST00000252444.9	5337	18	16058	1094	301	559	5prime_fragment	FALSE	canonical	1	455559	junction_11	106431.52589474617	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	4	1797	95.0	-6355	False	NA	NA
PB.5718.20	chr19	+	3511	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	-5	386	combination_of_known_junctions	FALSE	canonical	1	28228	junction_3	174306.08646031088	NA	1	NA	TRUE	NA	NA	NA	C	coding	733	2202	77	2278	70.0	10	True	NA	NA
PB.9919.7	chr6	-	2585	19	novel_in_catalog	VPS52	novel	3338	19	NA	NA	129	-10	no_combination_of_known_junctions	FALSE	canonical	1	13570	junction_1	138585.41872228874	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	40	1968	25.0	292	False	AATAAA	-14
PB.9919.6	chr6	-	3265	19	novel_not_in_catalog	VPS52	novel	3338	19	NA	NA	-5	-8	intron_retention	FALSE	non_canonical	0	0	junction_15	166607.68471910257	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	624	1670	20.0	-26	True	AATAAA	-16
PB.9919.5	chr6	-	2856	20	novel_in_catalog	VPS52	novel	3338	19	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	1	14821	junction_19	124511.70185670131	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	498	2294	20.0	38	False	AATAAA	-17
PB.9919.3	chr6	-	3229	19	novel_in_catalog	VPS52	novel	3338	19	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	140340	junction_18	108439.70174261721	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	231	1634	20.0	-24	True	AATAAA	-16
PB.9919.2	chr6	-	3309	18	novel_in_catalog	VPS52	novel	3338	19	NA	NA	81	-7	intron_retention	FALSE	canonical	1	140340	junction_17	109642.24011009562	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	40	1443	20.0	-9	True	AATAAA	-17
PB.9919.1	chr6	-	2927	20	full-splice_match	VPS52	ENST00000445902.2	2960	20	26	7	8	-7	multi-exon	FALSE	canonical	1	140340	junction_19	106033.32367118841	NA	1	NA	TRUE	NA	NA	NA	C	coding	717	2154	212	2365	20.0	-5	True	AATAAA	-17
PB.10203.12	chr6	+	2220	4	full-splice_match	RNF146	ENST00000476956.5	884	4	130	-1466	5	-5	multi-exon	FALSE	canonical	1	66355	junction_2	61378.71593276903	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	480	1556	30.0	-8	True	AATAAA	-15
PB.10203.13	chr6	+	2185	5	full-splice_match	RNF146	ENST00000608991.5	2169	5	-21	5	-2	-5	multi-exon	FALSE	canonical	1	17413	junction_2	77552.84283796436	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	445	1521	30.0	-2	True	AATAAA	-15
PB.10203.10	chr6	+	4950	1	novel_in_catalog	RNF146	novel	2369	3	NA	NA	1	-8947	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-12	True	NA	NA
PB.10203.11	chr6	+	4105	4	novel_in_catalog	RNF146	novel	2369	3	NA	NA	5	-5	intron_retention	FALSE	canonical	1	32290	junction_2	70392.83218402915	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	2365	3441	30.0	-8	True	AATAAA	-15
PB.10203.16	chr6	+	4215	4	novel_in_catalog	RNF146	novel	2369	3	NA	NA	1	-5	intron_retention	FALSE	canonical	1	8405	junction_1	87450.40865287912	NA	28	NA	TRUE	NA	NA	NA	C	coding	358	1077	2475	3551	30.0	1	True	AATAAA	-15
PB.10203.17	chr6	+	2391	6	novel_in_catalog	RNF146	novel	2369	3	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	4046	junction_3	74221.38925404186	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	651	1727	30.0	0	True	AATAAA	-15
PB.10203.14	chr6	+	3211	1	novel_in_catalog	RNF146	novel	2369	3	NA	NA	0	-10674	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	ATTAAA	-30
PB.10203.15	chr6	+	2085	3	full-splice_match	RNF146	ENST00000610153.1	2070	3	-19	4	0	-4	multi-exon	FALSE	canonical	1	71376	junction_2	6589.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	344	1420	25.0	0	True	AATAAA	-16
PB.10203.18	chr6	+	2119	1	novel_in_catalog	RNF146	novel	2369	3	NA	NA	2788	-8954	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	2793	False	NA	NA
PB.8978.9	chr4	+	2378	9	novel_in_catalog	ABHD18	novel	2177	11	NA	NA	24258	832	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	53955.82792433084	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	9	1073	100.0	NA	False	NA	NA
PB.8978.8	chr4	+	2074	13	full-splice_match	ABHD18	ENST00000645843.1	5827	13	144	3609	-24	32	multi-exon	FALSE	non_canonical	0	0	junction_6	43663.26775925809	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	175	1569	35.0	-14	True	AATAAA	-14
PB.8183.1	chr3	+	4214	9	novel_in_catalog	IL17RB	novel	2010	11	NA	NA	-73	4	intron_retention	FALSE	canonical	1	66893	junction_5	31673.222728355257	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	83	949	35.0	-61	False	AATAAA	-13
PB.8132.1	chr3	-	1843	4	full-splice_match	HYAL3	ENST00000336307.5	1942	4	98	1	31	0	multi-exon	FALSE	canonical	1	29262	junction_3	28962.54016253869	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	176	1429	5.0	1	True	CATAAA	-18
PB.8183.3	chr3	+	3104	8	incomplete-splice_match	IL17RB	ENST00000475124.1	2822	10	-30	5576	-26	-4879	3prime_fragment	FALSE	canonical	1	66893	junction_5	32584.959810267294	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	36	902	75.0	-14	False	NA	NA
PB.8183.2	chr3	+	1833	11	full-splice_match	IL17RB	ENST00000288167.7	2010	11	-31	208	-31	4	multi-exon	FALSE	canonical	1	50539	junction_8	31635.732641429375	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	41	1549	35.0	-19	False	AATAAA	-13
PB.8183.5	chr3	+	4589	7	novel_in_catalog	IL17RB	novel	2010	11	NA	NA	-12	-4882	intron_retention	FALSE	canonical	1	66893	junction_5	33650.595159422264	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	22	558	80.0	0	True	NA	NA
PB.8183.4	chr3	+	4345	9	novel_in_catalog	IL17RB	novel	2010	11	NA	NA	-13	4	intron_retention	FALSE	canonical	1	66893	junction_5	30076.85170915292	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	3171	4061	35.0	-1	True	AATAAA	-13
PB.8183.7	chr3	+	3039	7	incomplete-splice_match	IL17RB	ENST00000494338.1	1048	10	-17	4882	-12	-4882	intron_retention	TRUE	canonical	1	11461	junction_5	46243.047904222556	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	22	840	80.0	0	True	NA	NA
PB.8183.6	chr3	+	3046	10	full-splice_match	IL17RB	ENST00000475124.1	2822	10	-16	-208	-12	-4	multi-exon	FALSE	canonical	1	66893	junction_5	29864.55897696949	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	22	888	30.0	0	True	AATAAA	-16
PB.8183.9	chr3	+	2794	9	novel_in_catalog	IL17RB	novel	2010	11	NA	NA	-12	4	intron_retention	FALSE	canonical	1	11461	junction_5	41354.03928257039	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	22	840	35.0	0	True	AATAAA	-13
PB.9848.4	chr6	+	3147	24	novel_in_catalog	ABCF1	novel	3481	25	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	9363	junction_1	226102.37227559174	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	291	2537	20.0	-6	True	AATAAA	-19
PB.9681.4	chr5	-	3119	4	novel_not_in_catalog	ZFP62	novel	725	4	NA	NA	18	-1	any annotated donor/acceptor	FALSE	canonical	1	2614	junction_3	39246.599736650925	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	411	2672	30.0	0	True	AATAAA	-15
PB.9681.3	chr5	-	4066	2	novel_not_in_catalog	ZFP62	novel	725	4	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	8	1	TRUE	NA	NA	NA	C	coding	900	2703	187	2889	30.0	-6	True	AATAAA	-16
PB.9681.2	chr5	-	4064	3	novel_not_in_catalog	ZFP62	novel	725	4	NA	NA	1	1	intron_retention	FALSE	canonical	1	7280	junction_2	43094.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	867	2604	283	2886	30.0	-17	True	AATAAA	-17
PB.9681.1	chr5	-	4655	2	full-splice_match	ZFP62	ENST00000504225.1	749	2	-605	-3301	-17	1	multi-exon	FALSE	canonical	1	93469	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	867	2604	874	3477	30.0	73	False	AATAAA	-17
PB.8092.6	chr3	-	3446	14	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	42	-9	combination_of_known_junctions	FALSE	canonical	1	7026	junction_13	59807.27296345691	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	16	1392	45.0	-2	True	AATAAA	-9
PB.8092.7	chr3	-	3470	13	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	50	-9	no_combination_of_known_junctions	FALSE	canonical	1	8934	junction_8	59561.002857481246	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	64	1416	45.0	-7	True	AATAAA	-9
PB.10442.18	chr7	-	3630	22	novel_not_in_catalog	OSBPL3	novel	6760	23	NA	NA	10	-1	any annotated donor/acceptor	FALSE	canonical	1	1916	junction_20	69407.41255286388	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	453	2366	20.0	-24	True	AATAAA	-12
PB.8092.5	chr3	-	3639	15	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	42	-9	any annotated donor/acceptor	FALSE	canonical	1	2456	junction_5	73189.7200941094	NA	24	2	TRUE	NA	NA	NA	C	coding	428	1287	72	1358	45.0	-15	True	AATAAA	-9
PB.3983.8	chr15	-	3599	3	novel_in_catalog	FAM219B	novel	3550	5	NA	NA	14	0	intron_retention	FALSE	canonical	1	87367	junction_2	145014.5	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	AATAAA	-13
PB.3983.9	chr15	-	3297	6	full-splice_match	FAM219B	ENST00000564019.1	568	6	-12	-2717	-12	0	multi-exon	FALSE	canonical	1	12957	junction_3	104658.78745982108	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	20	415	10.0	-4	True	AATAAA	-13
PB.7207.9	chr20	-	3125	10	full-splice_match	NAPB	ENST00000398425.7	3824	10	24	675	-7	-672	multi-exon	FALSE	canonical	1	16553	junction_7	90921.60522337395	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	329	943	25.0	-35	True	AATAAA	-30
PB.3983.4	chr15	-	3162	4	full-splice_match	FAM219B	ENST00000569524.5	3219	4	60	-3	14	-2	multi-exon	FALSE	canonical	1	87367	junction_3	144763.38400837264	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	AATAAA	-17
PB.3983.5	chr15	-	3188	5	novel_in_catalog	FAM219B	novel	3550	5	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	114372	junction_1	93496.77531170526	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	61	444	10.0	-10	True	AATAAA	-17
PB.3983.6	chr15	-	2845	7	novel_in_catalog	FAM219B	novel	3550	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	45908	junction_4	122434.6038509493	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	81	527	10.0	-1	True	AATAAA	-17
PB.3983.7	chr15	-	3690	4	full-splice_match	FAM219B	ENST00000564857.1	1057	4	-96	-2537	11	0	multi-exon	FALSE	canonical	1	259789	junction_3	53471.92340534111	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	27	410	10.0	-11	True	AATAAA	-13
PB.6047.4	chr19	-	3881	10	full-splice_match	ZNF45	ENST00000269973.9	3898	10	15	2	15	0	multi-exon	FALSE	canonical	1	13530	junction_7	27124.34691664153	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	1077	3125	30.0	-1	True	NA	NA
PB.3983.1	chr15	-	2716	6	full-splice_match	FAM219B	ENST00000563119.5	2721	6	9	-4	9	-1	multi-exon	FALSE	canonical	1	114372	junction_1	103866.66532550278	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	29	625	10.0	-13	True	AATAAA	-18
PB.3983.2	chr15	-	3328	6	full-splice_match	FAM219B	ENST00000563069.5	1552	6	57	-1833	14	-2	multi-exon	FALSE	canonical	1	45908	junction_3	129258.31563191592	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	24	470	10.0	-8	True	AATAAA	-17
PB.3983.3	chr15	-	3250	5	full-splice_match	FAM219B	ENST00000357635.9	3550	5	298	2	14	-2	multi-exon	FALSE	canonical	1	259789	junction_4	65541.58322202782	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	24	620	10.0	-8	True	AATAAA	-17
PB.635.63	chr1	-	2932	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-55	any annotated donor/acceptor	FALSE	canonical	1	2198	junction_1	1452478.2230460516	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	447	2771	75.0	-1	True	NA	NA
PB.11024.2	chr8	+	3561	20	novel_in_catalog	CCAR2	novel	4853	21	NA	NA	-38	-6	intron_retention	FALSE	canonical	1	9753	junction_16	173858.38709163634	NA	2	NA	TRUE	NA	NA	NA	C	coding	874	2625	157	2781	50.0	-32	True	AATAAA	-9
PB.2651.14	chr12	+	3501	28	incomplete-splice_match	NCKAP1L	ENST00000545638.2	3612	31	9068	-144	-2021	144	5prime_fragment	FALSE	canonical	1	280074	junction_4	73492.0456443444	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	164	3079	15.0	9074	False	ATTAAA	-23
PB.11103.4	chr8	+	1593	9	novel_not_in_catalog	GINS4	novel	3841	8	NA	NA	13	-346	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	59235.03978418834	NA	2	1	TRUE	NA	NA	NA	B	coding	223	672	155	826	35.0	1	True	NA	NA
PB.11024.3	chr8	+	3148	21	full-splice_match	CCAR2	ENST00000308511.8	4853	21	111	1594	-20	-548	multi-exon	FALSE	canonical	1	515343	junction_11	111881.74101407254	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	139	2910	20.0	-14	True	AATACA	-17
PB.11103.1	chr8	+	1988	9	novel_not_in_catalog	GINS4	novel	3841	8	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	68202.56492610817	NA	2	1	TRUE	NA	NA	NA	B	coding	223	672	202	873	55.0	-54	False	AATAAA	-18
PB.11103.2	chr8	+	1708	9	novel_not_in_catalog	GINS4	novel	3841	8	NA	NA	0	-280	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	59235.03978418834	NA	1	NA	TRUE	NA	NA	NA	B	coding	223	672	199	870	70.0	-9	True	AATAAA	-12
PB.11103.3	chr8	+	1668	9	novel_not_in_catalog	GINS4	novel	3841	8	NA	NA	0	-279	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	59235.03978418834	NA	0	NA	TRUE	NA	NA	NA	B	coding	223	672	199	870	70.0	-9	True	AATAAA	-13
PB.9104.1	chr4	-	2115	1	full-splice_match	FLJ38576	ENST00000623820.1	2459	1	-963	1307	-963	-1307	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	237	714	982	1695	25.0	NA	False	AATAAA	-21
PB.1221.10	chr1	-	5487	17	full-splice_match	NID1	ENST00000366595.7	5412	17	-86	11	-33	-11	multi-exon	FALSE	canonical	1	3334	junction_8	123586.60781169756	NA	1	NA	TRUE	NA	NA	NA	C	coding	1114	3345	117	3461	50.0	6	True	AATAAA	-9
PB.8247.5	chr3	+	3248	8	full-splice_match	ARL13B	ENST00000303097.11	3264	8	14	2	1	-2	multi-exon	TRUE	canonical	1	5654	junction_1	42507.754360534156	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	269	1234	15.0	1	True	AATAAA	-14
PB.8807.5	chr4	-	4696	17	novel_not_in_catalog	YTHDC1	novel	6232	17	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	1	63438	junction_6	220373.76224975009	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	339	1991	15.0	14	False	AATAAA	-14
PB.2567.10	chr12	-	2138	17	novel_not_in_catalog	RPAP3	novel	4370	17	NA	NA	10	-22	any annotated donor/acceptor	FALSE	canonical	1	3672	junction_5	90274.06114083588	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	72	1442	75.0	-11	True	NA	NA
PB.635.62	chr1	-	2996	20	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	4	-55	combination_of_known_junctions	FALSE	canonical	1	12576	junction_19	1730657.8768954177	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	536	2839	75.0	3	True	NA	NA
PB.683.8	chr1	-	2433	2	novel_not_in_catalog	LIX1L	novel	3975	6	NA	NA	8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	21	True	ATTAAA	-19
PB.683.3	chr1	-	3983	6	full-splice_match	LIX1L	ENST00000604000.3	3975	6	-11	3	-11	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	86	1099	20.0	2	True	ATTAAA	-18
PB.683.2	chr1	-	3925	5	novel_in_catalog	LIX1L	novel	3975	6	NA	NA	-47	-1	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	122	1039	20.0	1	True	ATTAAA	-20
PB.683.1	chr1	-	3401	7	novel_not_in_catalog	LIX1L	novel	3975	6	NA	NA	-19	1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	C	coding	337	1014	94	1107	20.0	-6	True	ATTAAA	-22
PB.2651.12	chr12	+	5322	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	45	3649	-2	1626	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	2	1	TRUE	NA	NA	NA	C	coding	1127	3384	35	3418	10.0	4	True	NA	NA
PB.7668.3	chr22	-	4040	15	novel_in_catalog	HPS4	novel	471	4	NA	NA	0	590	combination_of_known_junctions	FALSE	canonical	1	20096	junction_1	93889.60451979042	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	498	2624	45.0	-1	True	NA	NA
PB.683.4	chr1	-	3695	7	novel_not_in_catalog	LIX1L	novel	3975	6	NA	NA	-45	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	120	1133	20.0	3	True	ATTAAA	-20
PB.10202.3	chr6	+	1871	13	novel_in_catalog	TRMT11	novel	1565	13	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	2278	junction_1	85850.27592021116	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	79	1434	30.0	18	True	AATAAA	-19
PB.6536.7	chr2	+	3957	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-19	1407	-19	681	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	48	1565	80.0	-19	True	NA	NA
PB.6536.6	chr2	+	5366	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-28	7	-28	-7	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	57	1574	5.0	-28	True	AATAAA	-14
PB.6536.5	chr2	+	3627	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-32	1750	-32	338	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	61	1578	20.0	-32	True	NA	NA
PB.6536.4	chr2	+	1899	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-4	3450	-4	954	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	33	1550	70.0	-4	True	NA	NA
PB.6536.3	chr2	+	3287	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-42	2100	-42	-12	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	71	1588	65.0	-42	True	NA	NA
PB.6536.2	chr2	+	4276	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-42	1111	-42	977	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	71	1588	80.0	-42	True	NA	NA
PB.6536.1	chr2	+	3489	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-46	1902	-46	186	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	75	1592	30.0	-46	True	ATTAAA	-14
PB.2334.3	chr11	+	3555	14	full-splice_match	UBASH3B	ENST00000284273.5	6912	14	47	3310	-3	-3310	multi-exon	FALSE	canonical	1	111467	junction_1	26308.50579084159	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	329	2278	40.0	0	True	AATAAA	-14
PB.2334.2	chr11	+	6865	14	full-splice_match	UBASH3B	ENST00000284273.5	6912	14	46	1	-4	-1	multi-exon	FALSE	canonical	1	111467	junction_1	26308.50579084159	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	330	2279	30.0	-1	True	AATAAA	-18
PB.2334.1	chr11	+	4278	14	full-splice_match	UBASH3B	ENST00000284273.5	6912	14	-16	2650	-16	-2650	multi-exon	FALSE	canonical	1	111467	junction_1	26308.50579084159	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	392	2341	40.0	0	True	AATAAA	-21
PB.9002.32	chr4	-	2721	3	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-160	5993	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58058.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	4	True	NA	NA
PB.2334.6	chr11	+	1995	12	incomplete-splice_match	UBASH3B	ENST00000284273.5	6912	14	47	7992	-3	-7992	3prime_fragment	FALSE	canonical	1	111467	junction_1	27743.90474999616	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1665	329	1993	65.0	0	True	NA	NA
PB.2334.5	chr11	+	2290	14	full-splice_match	UBASH3B	ENST00000284273.5	6912	14	47	4575	-3	-4575	multi-exon	FALSE	canonical	1	111467	junction_1	26308.50579084159	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	329	2278	45.0	0	True	AATAAA	-12
PB.2334.4	chr11	+	5206	14	full-splice_match	UBASH3B	ENST00000284273.5	6912	14	331	1375	281	-1375	multi-exon	FALSE	canonical	1	111467	junction_1	26308.50579084159	NA	23	2	TRUE	NA	NA	NA	C	coding	649	1950	45	1994	90.0	0	True	TTTAAA	-30
PB.8080.3	chr3	-	5705	28	full-splice_match	SMARCC1	ENST00000254480.9	6375	28	53	617	17	-617	multi-exon	FALSE	canonical	1	438864	junction_27	147698.30735901746	NA	1	NA	TRUE	NA	NA	NA	C	coding	1105	3318	68	3385	20.0	28	True	AATAAA	-23
PB.8807.7	chr4	-	2581	17	full-splice_match	YTHDC1	ENST00000344157.8	6232	17	34	3617	-10	-680	multi-exon	FALSE	canonical	1	408550	junction_16	149802.8352157715	NA	3	NA	TRUE	NA	NA	NA	C	coding	727	2184	303	2486	20.0	1	True	AGTAAA	-17
PB.8080.1	chr3	-	6200	28	full-splice_match	SMARCC1	ENST00000254480.9	6375	28	93	82	57	-82	multi-exon	FALSE	canonical	1	438864	junction_27	147698.30735901746	NA	4	NA	TRUE	NA	NA	NA	C	coding	1105	3318	28	3345	20.0	68	True	AATAAA	-14
PB.635.60	chr1	-	3318	17	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	2	-55	intron_retention	FALSE	canonical	1	94441	junction_16	1623506.3288029507	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	62	2071	75.0	-3	True	NA	NA
PB.8080.7	chr3	-	2430	2	novel_not_in_catalog	SMARCC1	novel	6375	28	NA	NA	-2	-622	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	9	True	AATAAA	-18
PB.9041.7	chr4	-	4384	5	full-splice_match	FAM198B	ENST00000296530.12	4985	5	347	254	347	-4	multi-exon	FALSE	canonical	1	66520	junction_4	69891.78552009886	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	276	1835	30.0	1	True	AATAAA	-38
PB.9041.1	chr4	-	3588	4	full-splice_match	FAM198B	ENST00000590648.5	701	4	19	-2906	19	-12	multi-exon	FALSE	canonical	1	1024	junction_3	110887.39211269944	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	120	797	55.0	-1	True	ATTAAA	-19
PB.9041.3	chr4	-	3529	4	novel_in_catalog	FAM198B	novel	4900	5	NA	NA	345	23	no_combination_of_known_junctions	FALSE	canonical	1	1013	junction_3	110892.57742618404	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	242	703	30.0	-1	True	AATAAA	-25
PB.9041.2	chr4	-	4660	5	full-splice_match	FAM198B	ENST00000296530.12	4985	5	346	-21	346	21	multi-exon	FALSE	canonical	1	66520	junction_4	69891.78552009886	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	277	1836	35.0	0	True	AATAAA	-23
PB.4652.4	chr17	-	2368	2	full-splice_match	MIR22HG	ENST00000574306.1	2626	2	45	213	2	-213	multi-exon	FALSE	canonical	1	53306	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	3	True	NA	NA
PB.10596.10	chr7	-	2209	7	full-splice_match	TBL2	ENST00000305632.10	4560	7	212	2139	-3	-7	multi-exon	FALSE	canonical	1	199997	junction_6	97969.82259079692	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	31	1374	50.0	-1	True	NA	NA
PB.10596.13	chr7	-	2073	7	full-splice_match	TBL2	ENST00000305632.10	4560	7	193	2294	1	-162	multi-exon	FALSE	canonical	1	199997	junction_6	97969.82259079692	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	50	1393	25.0	-20	True	NA	NA
PB.10596.12	chr7	-	2368	8	full-splice_match	TBL2	ENST00000426966.5	1196	8	41	-1213	-2	-8	multi-exon	FALSE	canonical	1	10040	junction_7	178150.48449452122	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	290	1534	50.0	0	True	NA	NA
PB.4533.2	chr16	-	3021	19	novel_in_catalog	VAC14	novel	702	2	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	13817	junction_4	92434.40680903886	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	271	2535	15.0	-13	True	AATAAA	-19
PB.4652.2	chr17	-	2632	2	full-splice_match	MIR22HG	ENST00000574306.1	2626	2	-6	0	-6	0	multi-exon	FALSE	canonical	1	53306	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-11	True	AATATA	-7
PB.4652.3	chr17	-	2542	3	incomplete-splice_match	MIR22HG	ENST00000577164.1	931	4	893	-1740	-30	-197	5prime_fragment	FALSE	canonical	1	123833	junction_2	4798.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.5717.7	chr19	+	3652	25	incomplete-splice_match	SMARCA4	ENST00000444061.8	5393	35	35154	1	0	1	5prime_fragment	FALSE	canonical	1	328031	junction_20	321938.39284023823	NA	1	NA	TRUE	NA	NA	NA	B	coding	1002	3009	190	3198	25.0	34	False	AATAAA	-15
PB.5717.6	chr19	+	3498	25	incomplete-splice_match	SMARCA4	ENST00000590574.6	5739	34	34902	201	-41	32	5prime_fragment	FALSE	canonical	1	415790	junction_2	305786.3983736578	NA	1	NA	TRUE	NA	NA	NA	B	coding	1003	3012	231	3242	10.0	-7	True	NA	NA
PB.3833.11	chr15	-	1793	8	incomplete-splice_match	SPG11	ENST00000559193.5	2579	12	-11	10993	-5	1	3prime_fragment	FALSE	canonical	1	127580	junction_7	50395.58683828882	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1770	23	1792	30.0	-8	True	AATAAA	-23
PB.5717.3	chr19	+	2035	11	novel_not_in_catalog	SMARCA4	novel	5791	35	NA	NA	-12	10052	any annotated donor/acceptor	FALSE	canonical	1	108	junction_7	321538.5791614437	NA	0	NA	TRUE	NA	NA	NA	B	coding	620	1860	176	2035	85.0	1	True	NA	NA
PB.5717.2	chr19	+	1919	10	incomplete-splice_match	SMARCA4	ENST00000642628.1	5637	35	67	65907	14	10052	3prime_fragment	FALSE	canonical	1	144479	junction_1	237176.12906185444	NA	0	NA	TRUE	NA	NA	NA	B	coding	579	1737	183	1919	85.0	-6	True	NA	NA
PB.5717.1	chr19	+	2015	11	novel_in_catalog	SMARCA4	novel	5791	35	NA	NA	0	10052	combination_of_known_junctions	FALSE	canonical	1	6742	junction_1	301276.50841194036	NA	1	NA	TRUE	NA	NA	NA	B	coding	579	1737	279	2015	85.0	13	True	NA	NA
PB.8489.38	chr3	-	4433	4	full-splice_match	CCNL1	ENST00000295925.5	549	4	-53	-3831	8	-150	multi-exon	FALSE	canonical	1	340686	junction_1	190457.09621737793	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	35.0	-1	True	AATAAA	-16
PB.8489.39	chr3	-	3486	4	full-splice_match	CCNL1	ENST00000295925.5	549	4	-51	-2886	-8	-1095	multi-exon	FALSE	canonical	1	340686	junction_1	190457.09621737793	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	52	570	25.0	1	True	AATAAA	-16
PB.11759.9	chr9	-	4332	9	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	375	-2	any annotated donor/acceptor	FALSE	canonical	1	132	junction_8	117533.79049740334	NA	3	NA	TRUE	NA	NA	NA	C	coding	416	1251	457	1707	35.0	7132	False	NA	NA
PB.8489.32	chr3	-	7132	4	full-splice_match	CCNL1	ENST00000295925.5	549	4	-47	-6536	-4	-359	multi-exon	FALSE	canonical	1	340686	junction_1	190457.09621737793	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	48	566	70.0	5	True	AATATA	-2
PB.8489.33	chr3	-	8921	3	full-splice_match	CCNL1	ENST00000471044.1	753	3	8	-8176	5	-361	multi-exon	FALSE	canonical	1	663472	junction_2	65154.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	57	548	75.0	-4	True	NA	NA
PB.8489.30	chr3	-	3539	6	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-13	intron_retention	FALSE	canonical	1	244647	junction_3	350873.32357453456	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	54	695	70.0	-1	True	AAGAAA	-44
PB.8489.31	chr3	-	2675	9	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	3	-13	intron_retention	FALSE	canonical	1	117545	junction_5	393472.29797979427	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	82	600	70.0	-1	True	AAGAAA	-44
PB.8489.36	chr3	-	2432	5	incomplete-splice_match	CCNL1	ENST00000295926.7	2388	11	49	2936	-6	-361	3prime_fragment	FALSE	canonical	1	244647	junction_2	202990.76307679617	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	71	748	75.0	595	False	NA	NA
PB.8489.37	chr3	-	2484	6	full-splice_match	CCNL1	ENST00000479596.5	883	6	-12	-1589	8	-365	multi-exon	FALSE	canonical	1	236802	junction_2	204395.9376383004	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	70.0	-1	True	NA	NA
PB.8489.35	chr3	-	2563	6	incomplete-splice_match	CCNL1	ENST00000477127.5	1464	11	31	1202	8	-361	3prime_fragment	FALSE	canonical	1	117545	junction_2	239659.80222557142	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	75.0	-1	True	NA	NA
PB.6508.1	chr2	-	2716	3	novel_not_in_catalog	LINC02245	novel	2928	2	NA	NA	-27336	-339	any annotated donor/acceptor	FALSE	canonical	1	5817	junction_1	907.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	142	429	101	529	80.0	7208	False	NA	NA
PB.6508.2	chr2	-	1769	3	novel_not_in_catalog	LINC02245	novel	2928	2	NA	NA	-27337	-342	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	3816.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	126	381	102	482	75.0	7207	False	NA	NA
PB.6508.3	chr2	-	2591	2	novel_not_in_catalog	LINC02245	novel	2928	2	NA	NA	-27384	-367	any annotated donor/acceptor	FALSE	canonical	1	6321	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	104	315	1418	1732	70.0	1	True	NA	NA
PB.6508.4	chr2	-	4496	1	intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-4	True	NA	NA
PB.6508.5	chr2	-	3251	1	intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	7200	False	AATATA	-29
PB.11416.2	chr8	-	2592	3	full-splice_match	ZNF16	ENST00000527512.5	568	3	-4	-2020	-4	0	multi-exon	FALSE	canonical	1	4693	junction_1	22359.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	611	2239	30.0	-22	True	AGTAAA	-20
PB.2586.2	chr12	-	2280	16	novel_not_in_catalog	LMBR1L	novel	2934	17	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_4	79697.78364786704	NA	2	1	TRUE	NA	NA	NA	C	coding	341	1026	343	1368	20.0	-1	True	AATAAA	-32
PB.2586.3	chr12	-	3063	16	novel_not_in_catalog	LMBR1L	novel	2934	17	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_4	97446.18926894986	NA	3	1	TRUE	NA	NA	NA	C	coding	302	909	1246	2154	20.0	2	True	AATAAA	-29
PB.2586.1	chr12	-	2341	17	full-splice_match	LMBR1L	ENST00000267102.12	2934	17	2	591	2	0	multi-exon	FALSE	canonical	1	163528	junction_14	49722.53544322075	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	342	1811	25.0	0	True	AATAAA	-30
PB.11416.1	chr8	-	2465	3	full-splice_match	ZNF16	ENST00000394909.6	2503	3	8	30	-5	-30	multi-exon	FALSE	canonical	1	49412	junction_2	6999.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	94	2142	50.0	-23	True	AATAGA	-27
PB.11637.8	chr9	+	4803	6	full-splice_match	SPIN1	ENST00000375859.3	4484	6	-11	-308	-11	308	multi-exon	FALSE	canonical	1	237621	junction_1	136938.68002197187	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	290	1078	20.0	-37	True	ATTAAA	-29
PB.7486.1	chr21	-	4808	21	novel_not_in_catalog	TIAM1	novel	7200	29	NA	NA	-59398	0	any annotated donor/acceptor	FALSE	canonical	1	19	junction_20	35037.43025551389	NA	3	NA	TRUE	NA	NA	NA	B	coding	910	2733	126	2858	5.0	NA	False	AATAAA	-15
PB.11637.6	chr9	+	4342	6	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	1	13438	junction_1	256307.80486017198	NA	3	1	TRUE	NA	NA	NA	C	coding	131	396	533	928	30.0	-39	True	AATAAA	-12
PB.11637.7	chr9	+	4810	9	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-11	-3	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_3	242129.91571800743	NA	3	NA	TRUE	NA	NA	NA	C	coding	262	789	608	1396	30.0	-37	True	AATAAA	-12
PB.11637.4	chr9	+	4602	7	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	13438	junction_1	221925.28312956792	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	398	1186	25.0	-43	True	AATAAA	-14
PB.11637.5	chr9	+	4792	8	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-14	-3	no_combination_of_known_junctions	FALSE	canonical	1	12	junction_2	240455.89781784883	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	590	1378	30.0	-40	True	AATAAA	-12
PB.11637.2	chr9	+	4339	5	full-splice_match	SPIN1	ENST00000485804.5	814	5	-78	-3447	-67	-2	multi-exon	FALSE	canonical	1	12849	junction_1	228504.74801891425	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	211	924	30.0	-878	False	AATAAA	-13
PB.11637.3	chr9	+	4773	8	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-21	1	no_combination_of_known_junctions	FALSE	canonical	1	7217	junction_2	236020.26941103415	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	567	1355	20.0	-47	True	AATAAA	-16
PB.11637.1	chr9	+	4532	6	novel_not_in_catalog	SPIN1	novel	4484	6	NA	NA	-474	-2	any annotated donor/acceptor	FALSE	canonical	1	862	junction_1	258836.38981673346	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	722	1117	30.0	12	True	AATAAA	-13
PB.1540.9	chr10	+	3072	5	incomplete-splice_match	MARCH5	ENST00000358935.2	3926	6	4	2103	4	1563	intron_retention	FALSE	canonical	1	372308	junction_1	77164.85615388653	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	329	1063	35.0	0	True	ATTAAA	-20
PB.1540.8	chr10	+	1493	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	4	2429	4	1237	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	329	1165	20.0	0	True	ATTAAA	-14
PB.5371.1	chr18	-	7937	1	novel_in_catalog	DLGAP1	novel	6683	13	NA	NA	-269	189525	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	457	False	AATAAA	-27
PB.8513.8	chr3	-	4820	15	full-splice_match	PHC3	ENST00000495893.6	12666	15	1	7845	-1	-208	multi-exon	FALSE	canonical	1	110362	junction_14	52892.59553446445	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	32	3019	20.0	-14	True	AATACA	-23
PB.9905.1	chr6	+	1945	1	novel_in_catalog	PSMB8-AS1	novel	1267	2	NA	NA	8	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-3	True	AATAAA	-25
PB.2564.7	chr12	-	3303	18	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	32	0	any annotated donor/acceptor	FALSE	canonical	1	7088	junction_2	305050.6762621468	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	458	1894	90.0	8	True	NA	NA
PB.1540.1	chr10	+	2044	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	4	1878	4	1788	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	329	1165	25.0	0	True	AATAAA	-25
PB.1540.3	chr10	+	3925	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	4	-3	4	3	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	329	1165	25.0	0	True	AATAAA	-18
PB.1540.2	chr10	+	1825	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	-3	2104	-3	1562	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	336	1172	35.0	-7	True	ATTAAA	-19
PB.1540.5	chr10	+	1697	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	4	2225	4	1441	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	329	1165	35.0	0	True	AATAAA	-39
PB.1540.4	chr10	+	4031	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	0	-105	0	105	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	333	1169	65.0	-4	True	AGTAAA	-15
PB.1540.7	chr10	+	2753	5	incomplete-splice_match	MARCH5	ENST00000358935.2	3926	6	2	2424	2	1242	intron_retention	FALSE	canonical	1	372308	junction_1	77164.85615388653	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	331	1065	20.0	-2	True	ATTAAA	-19
PB.1540.6	chr10	+	2542	6	full-splice_match	MARCH5	ENST00000358935.2	3926	6	142	1242	142	-1242	multi-exon	FALSE	canonical	1	372308	junction_1	69029.34402875345	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	191	1027	30.0	-8	True	ATTAAA	-28
PB.9496.24	chr5	+	4051	26	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	-6	-10	combination_of_known_junctions	FALSE	canonical	1	76261	junction_15	134986.30490780313	NA	0	NA	TRUE	NA	NA	NA	C	coding	1309	3927	125	4051	75.0	11	True	AAAAAG	-35
PB.2565.19	chr12	-	4447	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	94	347	0	-55	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	367	1872	55.0	-1	True	NA	NA
PB.10068.10	chr6	+	5497	32	novel_in_catalog	MYO6	novel	8692	36	NA	NA	3	-124	combination_of_known_junctions	FALSE	canonical	1	148676	junction_1	98318.99875831034	NA	3	NA	TRUE	NA	NA	NA	B	coding	1253	3762	260	4021	35.0	0	True	ATTAAA	-28
PB.11309.1	chr8	-	2764	1	novel_in_catalog	EXT1	novel	8270	11	NA	NA	121444	-163742	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	3466	False	NA	NA
PB.12100.2	chrX	+	4943	12	novel_in_catalog	TRO	novel	1196	2	NA	NA	0	-3	intron_retention	FALSE	canonical	1	23883	junction_1	45872.77444562127	NA	0	NA	TRUE	NA	NA	NA	C	coding	1387	4164	546	4709	20.0	-1812	False	ATTAAA	-9
PB.12100.3	chrX	+	5058	12	novel_in_catalog	TRO	novel	1196	2	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	23883	junction_1	43593.42227147168	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	2383	4827	35.0	-1799	False	ATTAAA	-6
PB.12100.1	chrX	+	2995	13	novel_in_catalog	TRO	novel	1196	2	NA	NA	0	-6	intron_retention	TRUE	canonical	1	8166	junction_2	57351.42345128748	NA	2	1	TRUE	NA	NA	NA	C	coding	561	1686	214	1899	35.0	-1812	False	ATTAAA	-6
PB.2565.17	chr12	-	4680	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	46	162	46	130	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	415	1920	20.0	-22	False	NA	NA
PB.12100.7	chrX	+	2722	12	novel_in_catalog	TRO	novel	1196	2	NA	NA	0	-6	intron_retention	FALSE	canonical	1	23883	junction_1	51651.320150978165	NA	4	1	TRUE	NA	NA	NA	C	coding	605	1818	100	1917	35.0	0	True	ATTAAA	-6
PB.2565.15	chr12	-	8113	14	novel_in_catalog	SLC38A2	novel	4888	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	1757762	junction_11	290671.6996095718	NA	2	NA	TRUE	NA	NA	NA	C	coding	415	1248	3944	5191	15.0	-1	True	AATAAA	-17
PB.12100.5	chrX	+	3004	13	novel_in_catalog	TRO	novel	1196	2	NA	NA	2	-6	intron_retention	FALSE	canonical	1	38356	junction_11	41079.750927227586	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	91	1908	35.0	-6	True	ATTAAA	-6
PB.3913.9	chr15	+	5599	16	full-splice_match	USP3	ENST00000559192.5	5499	16	-108	8	-9	-1	multi-exon	FALSE	canonical	1	34488	junction_2	119517.24420454519	NA	6	NA	TRUE	NA	NA	NA	C	coding	435	1308	486	1793	20.0	24	True	ATTAAA	-15
PB.3913.8	chr15	+	2566	16	full-splice_match	USP3	ENST00000558157.5	2439	16	-15	-112	8	89	multi-exon	FALSE	canonical	1	29074	junction_1	114950.52753393039	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	340	1836	50.0	18	True	AGTAAA	-22
PB.10202.2	chr6	+	2335	14	novel_in_catalog	TRMT11	novel	1565	13	NA	NA	-18	-4	combination_of_known_junctions	FALSE	canonical	1	7174	junction_9	92982.75498412525	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	91	864	35.0	6	True	AATAAA	-18
PB.11780.31	chr9	+	2306	10	full-splice_match	NEK6	ENST00000394199.6	2535	10	-752	981	210	-981	multi-exon	FALSE	canonical	1	50583	junction_1	214036.87481320236	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	753	1796	25.0	138	False	GATAAA	-24
PB.3370.5	chr14	-	7028	36	full-splice_match	HEATR5A	ENST00000543095.6	7840	36	0	812	0	-1	multi-exon	FALSE	canonical	1	59212	junction_30	23386.352795437193	NA	0	NA	TRUE	NA	NA	NA	C	coding	2046	6141	186	6326	90.0	-1	True	NA	NA
PB.3913.3	chr15	+	5542	15	full-splice_match	USP3	ENST00000380324.7	2333	15	-33	-3176	-16	3	multi-exon	FALSE	canonical	1	175398	junction_1	64755.93340102323	NA	2	NA	TRUE	NA	NA	NA	C	coding	520	1563	163	1725	20.0	-7398	False	ATTAAA	-26
PB.3913.2	chr15	+	2510	16	novel_in_catalog	USP3	novel	5474	14	NA	NA	12	-4	combination_of_known_junctions	TRUE	canonical	1	736	junction_2	126758.08900971785	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	218	1873	20.0	-1	True	AATAAA	-36
PB.3913.1	chr15	+	2297	15	full-splice_match	USP3	ENST00000380324.7	2333	15	25	11	1	-11	multi-exon	FALSE	canonical	1	175398	junction_1	64755.93340102323	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	105	1667	45.0	34	True	AATAAA	-29
PB.11780.30	chr9	+	1648	10	full-splice_match	NEK6	ENST00000539416.5	2582	10	-54	988	-54	-988	multi-exon	FALSE	canonical	1	2681	junction_1	227777.9397161484	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	204	1145	10.0	315	False	GATAAA	-17
PB.3913.7	chr15	+	2248	14	novel_in_catalog	USP3	novel	5474	14	NA	NA	7	-11	no_combination_of_known_junctions	FALSE	canonical	1	2832	junction_5	111278.14890890177	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	803	1618	45.0	0	True	AATAAA	-29
PB.3913.6	chr15	+	2601	17	novel_in_catalog	USP3	novel	5474	14	NA	NA	6	-11	combination_of_known_junctions	FALSE	canonical	1	29074	junction_1	142407.2995446155	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	664	1971	45.0	-1	True	AATAAA	-29
PB.3913.5	chr15	+	2461	16	full-splice_match	USP3	ENST00000559192.5	5499	16	-141	3179	-1	-6	multi-exon	FALSE	canonical	1	34488	junction_2	119517.24420454519	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	519	1826	25.0	-9	True	AATAAA	-34
PB.3913.4	chr15	+	2446	16	novel_not_in_catalog	USP3	novel	5474	14	NA	NA	-2	-11	any annotated donor/acceptor	FALSE	canonical	1	6591	junction_8	128344.83635927427	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	149	1816	45.0	-10	True	AATAAA	-29
PB.3351.10	chr14	-	2013	6	full-splice_match	TINF2	ENST00000399423.8	2168	6	22	133	-6	19	multi-exon	FALSE	canonical	1	359220	junction_5	71914.61668117267	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	310	1374	10.0	21	False	ACTAAA	-12
PB.9496.22	chr5	+	2677	16	incomplete-splice_match	ANKHD1	ENST00000421134.5	4814	27	-15	29381	-15	214	3prime_fragment	FALSE	canonical	1	111724	junction_11	142134.85186477742	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2544	134	2677	65.0	2	True	NA	NA
PB.9579.9	chr5	+	2940	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	8	-145	-1	145	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	3	NA	TRUE	NA	NA	NA	C	coding	466	1401	136	1536	35.0	-3	True	NA	NA
PB.8486.1	chr3	+	2241	6	full-splice_match	TIPARP	ENST00000295924.11	4109	6	228	1640	228	-9	multi-exon	FALSE	canonical	1	258001	junction_1	67828.65692493109	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1971	269	2239	40.0	-3348	False	NA	NA
PB.8486.3	chr3	+	1770	5	incomplete-splice_match	TIPARP	ENST00000295924.11	4109	6	243	3077	243	-2	3prime_fragment	FALSE	canonical	1	258001	junction_1	75631.41198065458	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1515	254	1768	45.0	-5	True	NA	NA
PB.9496.23	chr5	+	1901	11	full-splice_match	ANKHD1	ENST00000394723.7	2135	11	232	2	165	-1	multi-exon	FALSE	canonical	1	324894	junction_10	112673.68073618611	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	459	1766	10.0	-906	False	AATAAA	-20
PB.8486.5	chr3	+	4231	2	incomplete-splice_match	TIPARP	ENST00000295924.11	4109	6	267	25071	-236	-21996	3prime_fragment	FALSE	canonical	1	258001	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	230	1306	30.0	-5	True	ATTAAA	-12
PB.8486.4	chr3	+	3857	6	full-splice_match	TIPARP	ENST00000295924.11	4109	6	248	4	248	0	multi-exon	FALSE	canonical	1	258001	junction_1	67828.65692493109	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	249	2222	20.0	0	True	AATAAA	-34
PB.6758.2	chr2	-	2915	17	full-splice_match	MCM6	ENST00000264156.2	3736	17	2	819	2	-819	multi-exon	FALSE	canonical	1	470774	junction_14	104907.77750302882	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	60	2525	20.0	18	True	AATAAA	-14
PB.6851.8	chr2	-	3944	12	novel_in_catalog	ATF2	novel	4176	14	NA	NA	1	-2	intron_retention	FALSE	canonical	1	3101	junction_7	135368.3593662886	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	388	1587	15.0	-3	True	AATAAA	-24
PB.10776.6	chr7	+	2818	11	full-splice_match	HBP1	ENST00000222574.8	2829	11	-12	23	3	-2	multi-exon	FALSE	canonical	1	94403	junction_1	161603.3321212468	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	199	1743	45.0	0	True	AATAAA	-4
PB.1803.2	chr11	+	1930	3	full-splice_match	RPL27A	ENST00000530585.5	577	3	6	-1359	2	0	multi-exon	FALSE	canonical	1	494233	junction_1	922672.0	NA	42	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2	True	ATTAAA	-17
PB.1803.1	chr11	+	1510	5	full-splice_match	RPL27A	ENST00000314138.10	4916	5	381	3025	0	999	multi-exon	FALSE	canonical	1	13060	junction_3	4404678.414277767	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	23	469	10.0	0	True	NA	NA
PB.10158.10	chr6	+	3287	8	novel_in_catalog	AMD1	novel	3438	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	996	junction_2	529820.0256714828	NA	38	1	TRUE	NA	NA	NA	C	coding	217	654	546	1199	25.0	0	True	AATAAA	-20
PB.10158.17	chr6	+	3149	9	novel_not_in_catalog	AMD1	novel	3438	9	NA	NA	-257	2	any annotated donor/acceptor	FALSE	canonical	1	1058	junction_1	541695.328558046	NA	2	NA	TRUE	NA	NA	NA	C	coding	265	798	262	1059	20.0	-1182	False	AATAAA	-22
PB.10158.16	chr6	+	5667	10	novel_not_in_catalog	AMD1	novel	3438	9	NA	NA	1	3040	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	512123.4957969936	NA	6	NA	TRUE	NA	NA	NA	C	coding	334	1005	321	1325	20.0	1	True	NA	NA
PB.10158.15	chr6	+	1793	1	novel_in_catalog	AMD1	novel	3438	9	NA	NA	0	-17405	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	151	456	322	777	55.0	0	True	NA	NA
PB.10158.14	chr6	+	1803	8	full-splice_match	AMD1	ENST00000368877.9	1605	8	0	-198	0	119	multi-exon	FALSE	canonical	1	25829	junction_1	529423.9571701242	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	322	1239	45.0	0	True	ATTAAA	-27
PB.9579.8	chr5	+	8805	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	-2	-6000	-2	-1435	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	146	1546	40.0	-4974	False	NA	NA
PB.570.10	chr1	+	5412	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	21	2465	21	-2465	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	167	1297	85.0	-23	True	NA	NA
PB.570.11	chr1	+	4867	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	24	3007	24	-3007	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	164	1294	15.0	-20	True	TATAAA	-4
PB.570.12	chr1	+	5724	11	full-splice_match	SLC30A7	ENST00000357650.8	1281	11	-153	-4290	25	-2465	multi-exon	FALSE	canonical	1	137600	junction_8	30698.039475510483	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	163	1293	85.0	-19	True	NA	NA
PB.570.13	chr1	+	2352	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	26	5520	26	1235	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	3	1	TRUE	NA	NA	NA	C	coding	376	1131	162	1292	30.0	-18	True	AAAAAG	-19
PB.8621.4	chr3	-	5068	5	full-splice_match	RNF168	ENST00000437070.1	2202	5	-11	-2855	-11	-122	multi-exon	FALSE	canonical	1	5367	junction_4	84139.25045720338	NA	8	NA	TRUE	NA	NA	NA	C	coding	404	1215	940	2154	10.0	-1	True	AATAAA	-16
PB.10581.1	chr7	-	1708	7	novel_not_in_catalog	PMS2P4	novel	1052	5	NA	NA	-42	22131	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41067.97276061562	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-17	True	NA	NA
PB.9169.7	chr5	+	2280	19	full-splice_match	TARS	ENST00000265112.7	4314	19	205	1829	4	-128	multi-exon	FALSE	canonical	1	1135506	junction_4	278677.2242202637	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	107	2278	45.0	-12	True	NA	NA
PB.10581.3	chr7	-	1803	6	novel_not_in_catalog	PMS2P4	novel	1052	5	NA	NA	-55	20564	any annotated donor/acceptor	FALSE	canonical	1	1089	junction_1	38828.198619044895	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-30	False	NA	NA
PB.10581.2	chr7	-	1899	7	novel_not_in_catalog	PMS2P4	novel	1052	5	NA	NA	-26	20564	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	43113.99467947991	NA	5	2	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.9169.2	chr5	+	3687	18	novel_in_catalog	TARS	novel	2534	20	NA	NA	1	0	intron_retention	FALSE	canonical	1	1135506	junction_4	279458.39847962314	NA	3	NA	TRUE	NA	NA	NA	C	coding	425	1278	122	1399	80.0	-27	True	AAAAAG	-43
PB.10581.4	chr7	-	3079	6	novel_not_in_catalog	PMS2P4	novel	1052	5	NA	NA	-53	10372	any annotated donor/acceptor	FALSE	canonical	1	512	junction_1	38990.72120697436	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-28	False	NA	NA
PB.10577.8	chr7	+	2464	11	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111736	-1373	no_combination_of_known_junctions	FALSE	canonical	1	14948	junction_2	125369.86442538732	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	457	1932	20.0	-12	True	AATGAA	-15
PB.10577.9	chr7	+	2299	9	full-splice_match	RABGEF1	ENST00000284957.9	3733	9	-39	1473	38	174	multi-exon	FALSE	canonical	1	181567	junction_1	45576.88116180724	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	117	1592	35.0	-12	True	AATAAA	-13
PB.10577.6	chr7	+	3971	10	full-splice_match	RABGEF1	ENST00000450873.6	2281	10	-48	-1642	29	0	multi-exon	FALSE	canonical	1	37281	junction_1	107249.65689018184	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	321	1796	30.0	-21	True	AATAAA	-24
PB.10577.7	chr7	+	2085	9	full-splice_match	RABGEF1	ENST00000284957.9	3733	9	0	1648	0	-1	multi-exon	FALSE	canonical	1	181567	junction_1	45576.88116180724	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	78	1553	20.0	0	True	AATGAA	-15
PB.10577.4	chr7	+	3711	10	full-splice_match	RABGEF1	ENST00000450873.6	2281	10	-57	-1373	20	-269	multi-exon	FALSE	canonical	1	37281	junction_1	107249.65689018184	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	330	1805	20.0	-57	False	AATAAA	-21
PB.10577.5	chr7	+	3341	8	full-splice_match	RABGEF1	ENST00000437078.6	4319	8	708	270	27	-270	multi-exon	FALSE	canonical	1	19161	junction_3	102734.98346081474	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	537	1436	25.0	-50	False	AATAAA	-20
PB.10577.2	chr7	+	3867	11	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111703	-3	no_combination_of_known_junctions	FALSE	canonical	1	14948	junction_2	125369.86442538732	NA	3	NA	TRUE	NA	NA	NA	B	coding	491	1476	490	1965	30.0	-72	False	AATAAA	-17
PB.10577.3	chr7	+	3790	9	full-splice_match	RABGEF1	ENST00000284957.9	3733	9	-62	5	15	0	multi-exon	FALSE	canonical	1	181567	junction_1	45576.88116180724	NA	3	NA	TRUE	NA	NA	NA	C	coding	491	1476	140	1615	30.0	-62	False	AATAAA	-24
PB.9169.8	chr5	+	2123	18	incomplete-splice_match	TARS	ENST00000502553.5	2534	20	291	948	-6	68	internal_fragment	FALSE	canonical	1	1135506	junction_4	267802.00707321614	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2022	101	2122	45.0	-6	True	AATAAA	-44
PB.10577.1	chr7	+	1850	9	full-splice_match	RABGEF1	ENST00000284957.9	3733	9	-84	1967	-7	-165	multi-exon	FALSE	canonical	1	181567	junction_1	45576.88116180724	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	162	1637	25.0	-84	False	AATAAA	-37
PB.10206.1	chr6	-	5386	11	incomplete-splice_match	AL096711.2	ENST00000481848.6	11464	12	2931	5023	2931	610	5prime_fragment	FALSE	canonical	1	33761	junction_6	30763.34377729443	NA	0	NA	TRUE	NA	NA	NA	B	coding	670	2013	288	2300	40.0	3308	False	AATAAA	-15
PB.1251.1	chr1	-	5316	10	novel_in_catalog	ZNF496	novel	9243	2	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	1	59434	junction_9	68300.93101004924	NA	2	NA	TRUE	NA	NA	NA	B	coding	587	1764	451	2214	20.0	-8	True	AATAAA	-14
PB.10206.3	chr6	-	4934	11	novel_in_catalog	AL096711.2	novel	11464	12	NA	NA	2933	169	combination_of_known_junctions	FALSE	canonical	1	6701	junction_6	36429.60935777379	NA	0	NA	TRUE	NA	NA	NA	B	coding	667	2004	286	2289	30.0	3310	False	AATATA	-14
PB.10206.2	chr6	-	6985	10	novel_in_catalog	AL096711.2	novel	11464	12	NA	NA	2957	334	intron_retention	FALSE	canonical	1	59727	junction_7	25174.39229813198	NA	1	NA	TRUE	NA	NA	NA	B	coding	667	2004	262	2265	20.0	4	True	NA	NA
PB.10206.5	chr6	-	2998	8	incomplete-splice_match	AL096711.2	ENST00000481848.6	11464	12	2915	11721	2915	60	internal_fragment	FALSE	canonical	1	33761	junction_3	24067.52168634006	NA	0	NA	TRUE	NA	NA	NA	B	coding	670	2013	304	2316	80.0	3292	False	AATAAA	-44
PB.10206.4	chr6	-	3388	10	novel_in_catalog	AL096711.2	novel	11464	12	NA	NA	2931	2644	combination_of_known_junctions	FALSE	canonical	1	6701	junction_5	30065.895782595213	NA	1	NA	TRUE	NA	NA	NA	B	coding	667	2004	288	2291	60.0	3308	False	NA	NA
PB.12083.1	chrX	-	2372	2	full-splice_match	NUDT11	ENST00000375992.3	2385	2	4	9	4	-9	multi-exon	FALSE	canonical	1	127672	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	164	495	149	643	45.0	-1	True	NA	NA
PB.10015.4	chr6	+	2553	12	full-splice_match	HSP90AB1	ENST00000371646.9	2572	12	15	4	15	-1	multi-exon	FALSE	canonical	1	1694090	junction_7	2873165.343245576	NA	11	3	TRUE	NA	NA	NA	C	coding	724	2175	95	2269	10.0	1	True	AATAAA	-20
PB.7675.9	chr22	-	1954	4	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	344769.3372802556	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.9175.5	chr5	-	1635	6	full-splice_match	RAD1	ENST00000382038.6	5770	6	1208	2927	-10	-19	multi-exon	FALSE	canonical	1	69624	junction_3	150269.02387438336	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	213	1061	95.0	6	True	NA	NA
PB.9175.4	chr5	-	2332	6	full-splice_match	RAD1	ENST00000382038.6	5770	6	1203	2235	-15	673	multi-exon	FALSE	canonical	1	69624	junction_3	150269.02387438336	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	218	1066	60.0	1	True	AATAAA	-27
PB.9175.6	chr5	-	1278	6	full-splice_match	RAD1	ENST00000382038.6	5770	6	1203	3289	-15	1	multi-exon	FALSE	canonical	1	69624	junction_3	150269.02387438336	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	218	1066	20.0	1	True	AATAAA	-20
PB.9175.1	chr5	-	3905	7	novel_not_in_catalog	RAD1	novel	5770	6	NA	NA	5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	164419.2194866018	NA	2	1	TRUE	NA	NA	NA	C	coding	282	849	198	1046	40.0	0	True	AATAAA	-16
PB.9175.3	chr5	-	2454	5	full-splice_match	RAD1	ENST00000325577.8	1153	5	-17	-1284	-17	902	multi-exon	FALSE	canonical	1	103036	junction_3	141689.7520736327	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	468	959	30.0	-1	True	AATAAA	-14
PB.9175.2	chr5	-	2543	6	full-splice_match	RAD1	ENST00000382038.6	5770	6	1225	2002	7	906	multi-exon	FALSE	canonical	1	69624	junction_3	150269.02387438336	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	196	1044	35.0	2	True	AATAAA	-18
PB.9044.4	chr4	-	1836	2	full-splice_match	C4orf46	ENST00000379205.4	3521	2	160	1525	6	721	multi-exon	FALSE	canonical	1	33540	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	86	427	20.0	-5	True	AATAAA	-28
PB.1858.3	chr11	+	2650	18	novel_in_catalog	NELL1	novel	3094	19	NA	NA	273	11	combination_of_known_junctions	FALSE	canonical	1	405	junction_1	8354.735067933832	NA	9	NA	TRUE	NA	NA	NA	C	coding	703	2112	91	2202	25.0	-1315	False	AATAAA	-30
PB.1858.2	chr11	+	3023	20	full-splice_match	NELL1	ENST00000357134.9	3022	20	14	-15	14	15	multi-exon	FALSE	canonical	1	13267	junction_16	6721.318586008703	NA	2	1	TRUE	NA	NA	NA	C	coding	810	2433	139	2571	25.0	0	True	AATAAA	-34
PB.1858.1	chr11	+	3231	20	full-splice_match	NELL1	ENST00000357134.9	3022	20	13	-222	13	0	multi-exon	TRUE	canonical	1	13267	junction_16	6721.318586008703	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	140	2572	85.0	-1	True	TTTAAA	-22
PB.3192.10	chr13	+	2296	16	novel_in_catalog	PIBF1	novel	3154	18	NA	NA	-6	-17076	no_combination_of_known_junctions	FALSE	canonical	1	2072	junction_9	39570.03181365076	NA	2	NA	TRUE	NA	NA	NA	C	coding	677	2031	264	2294	55.0	1	True	AGTAAA	-39
PB.3192.11	chr13	+	2393	17	incomplete-splice_match	PIBF1	ENST00000326291.10	3154	18	77	17557	-4	-17076	3prime_fragment	FALSE	canonical	1	121177	junction_1	16024.998058575351	NA	2	NA	TRUE	NA	NA	NA	C	coding	710	2130	262	2391	55.0	3	True	AGTAAA	-39
PB.3192.12	chr13	+	2735	18	novel_not_in_catalog	PIBF1	novel	3154	18	NA	NA	-3	76	any annotated donor/acceptor	FALSE	canonical	1	1499	junction_8	38697.99746336676	NA	1	NA	TRUE	NA	NA	NA	C	coding	749	2250	261	2510	35.0	4	True	AATAAA	-18
PB.3192.13	chr13	+	3805	14	incomplete-splice_match	PIBF1	ENST00000617689.4	2882	16	21	41248	7	39132	3prime_fragment	FALSE	canonical	1	121177	junction_1	17076.334309323738	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	237	2096	30.0	-4	True	NA	NA
PB.860.1	chr1	+	2675	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	8	6	5	1	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	30	1037	40.0	0	True	NA	NA
PB.11270.17	chr8	-	3616	10	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	57	-9	no_combination_of_known_junctions	FALSE	canonical	1	1546	junction_8	159186.00644862515	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	543	2129	5.0	7	True	AATAAA	-15
PB.860.2	chr1	+	2353	6	full-splice_match	SLAMF7	ENST00000368042.7	2365	6	6	6	6	1	multi-exon	FALSE	canonical	1	36965	junction_1	182325.02157454964	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	29	715	40.0	1	True	NA	NA
PB.860.3	chr1	+	2264	5	full-splice_match	SLAMF7	ENST00000458602.6	2449	5	188	-3	-2	3	multi-exon	TRUE	canonical	1	7489	junction_2	253774.39345115182	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	58	624	35.0	-2	True	NA	NA
PB.9311.3	chr5	-	4919	5	novel_not_in_catalog	LHFPL2	novel	4680	3	NA	NA	976	-1	any annotated donor/acceptor	FALSE	canonical	1	7940	junction_4	52159.74228931255	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	584	1240	25.0	1251	False	ATTAAA	-30
PB.9044.3	chr4	-	3357	2	full-splice_match	C4orf46	ENST00000379205.4	3521	2	165	-1	11	1	multi-exon	FALSE	canonical	1	33540	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	81	422	20.0	0	True	NA	NA
PB.841.22	chr1	+	2924	12	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	295	junction_8	490538.94107816013	NA	1	NA	TRUE	NA	NA	NA	C	coding	729	2190	488	2677	35.0	-19	True	AATAAA	-21
PB.860.6	chr1	+	2309	5	full-splice_match	SLAMF7	ENST00000441662.6	2497	5	190	-2	0	2	multi-exon	FALSE	canonical	1	841	junction_2	225837.1855102421	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	56	670	40.0	0	True	NA	NA
PB.11708.2	chr9	-	5127	37	novel_not_in_catalog	ELP1	novel	2840	12	NA	NA	-19	472	any annotated donor/acceptor	FALSE	canonical	1	41638	junction_36	106075.09768224873	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	525	4181	30.0	-49	True	ATTAAA	-24
PB.7675.5	chr22	-	6352	10	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_6	217671.50072892007	NA	2	1	TRUE	NA	NA	NA	B	coding	339	1020	61	1080	10.0	4	True	NA	NA
PB.3504.13	chr14	-	2032	4	novel_not_in_catalog	MAX	novel	330	4	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	491404.8861621138	NA	15	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-3	True	AATAAA	-16
PB.3937.9	chr15	+	3982	17	novel_in_catalog	DIS3L	novel	3763	17	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	1	18771	junction_1	62892.169995028744	NA	3	NA	TRUE	NA	NA	NA	C	coding	1037	3114	285	3398	20.0	183	False	AATAAA	-16
PB.3937.8	chr15	+	2682	14	novel_in_catalog	DIS3L	novel	3763	17	NA	NA	-31	-237	combination_of_known_junctions	FALSE	canonical	1	18771	junction_1	62126.58410595706	NA	2	NA	TRUE	NA	NA	NA	C	coding	798	2394	287	2680	70.0	181	False	NA	NA
PB.4335.1	chr16	+	3102	21	full-splice_match	EIF3C	ENST00000566501.5	3128	21	24	2	24	0	multi-exon	TRUE	canonical	1	88	junction_1	86478.6081019318	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	278	3019	5.0	NA	False	ACTAAA	-16
PB.3937.5	chr15	+	3874	16	novel_in_catalog	DIS3L	novel	3763	17	NA	NA	21	-2	intron_retention	FALSE	canonical	1	51356	junction_1	57405.88062814935	NA	5	NA	TRUE	NA	NA	NA	C	coding	804	2415	30	2444	20.0	0	True	AATAAA	-16
PB.3937.4	chr15	+	3613	17	full-splice_match	DIS3L	ENST00000319212.8	3647	17	19	15	19	1	multi-exon	FALSE	canonical	1	51356	junction_1	56823.8975034657	NA	1	NA	TRUE	NA	NA	NA	C	coding	1054	3165	32	3196	100.0	-2	True	NA	NA
PB.3937.7	chr15	+	3818	17	novel_in_catalog	DIS3L	novel	3763	17	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	18771	junction_1	62892.169995028744	NA	1	NA	TRUE	NA	NA	NA	C	coding	1037	3114	289	3402	100.0	179	False	NA	NA
PB.3937.6	chr15	+	2418	12	full-splice_match	DIS3L	ENST00000564909.5	2399	12	-18	-1	-18	1	multi-exon	FALSE	canonical	1	51356	junction_1	55448.712126724786	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	20	2272	5.0	10	True	AAAACA	-17
PB.3937.1	chr15	+	2442	14	incomplete-splice_match	DIS3L	ENST00000319212.8	3647	17	55	4433	6	-237	3prime_fragment	FALSE	canonical	1	51356	junction_1	55007.589690533896	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2196	245	2440	70.0	-18	False	NA	NA
PB.3504.11	chr14	-	2077	6	novel_not_in_catalog	MAX	novel	330	4	NA	NA	38	0	any annotated donor/acceptor	FALSE	canonical	1	29237	junction_5	411257.03695834795	NA	1	NA	TRUE	NA	NA	NA	C	coding	35	108	246	353	0.0	237	False	AATAAA	-17
PB.3937.3	chr15	+	3679	17	full-splice_match	DIS3L	ENST00000319212.8	3647	17	29	-61	-20	61	multi-exon	FALSE	canonical	1	51356	junction_1	56823.8975034657	NA	1	NA	TRUE	NA	NA	NA	C	coding	1054	3165	22	3186	40.0	8	True	AATAAA	-20
PB.3937.2	chr15	+	3697	16	novel_in_catalog	DIS3L	novel	3763	17	NA	NA	19	-2	no_combination_of_known_junctions	FALSE	canonical	1	4012	junction_2	75217.53538725749	NA	3	NA	TRUE	NA	NA	NA	C	coding	1011	3036	78	3113	20.0	-100	False	AATAAA	-16
PB.226.1	chr1	+	3395	14	full-splice_match	PHACTR4	ENST00000373839.7	6190	14	112	2683	5	141	multi-exon	FALSE	canonical	1	74175	junction_2	76093.06284120922	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	150	2258	95.0	-26	True	NA	NA
PB.226.2	chr1	+	3611	15	novel_not_in_catalog	PHACTR4	novel	597	5	NA	NA	-4	141	any annotated donor/acceptor	FALSE	canonical	1	14982	junction_1	100237.93291293553	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	366	2474	95.0	-172	False	NA	NA
PB.3504.10	chr14	-	1940	5	full-splice_match	MAX	ENST00000358664.8	1546	5	-48	-346	1	4	multi-exon	FALSE	canonical	1	388320	junction_4	308089.80233154015	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	180	662	30.0	-2	True	AATAAA	-22
PB.2192.1	chr11	-	6131	10	full-splice_match	GAB2	ENST00000361507.4	6092	10	-39	0	-23	0	multi-exon	FALSE	canonical	1	65616	junction_9	59778.16362390964	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	126	2156	25.0	-26	True	AATAAA	-21
PB.9369.1	chr5	-	1516	1	antisense	novelGene_PAM_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.226.6	chr1	+	3073	14	full-splice_match	PHACTR4	ENST00000373839.7	6190	14	138	2979	2	87	multi-exon	FALSE	canonical	1	74175	junction_2	76093.06284120922	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	124	2232	65.0	0	True	NA	NA
PB.2192.2	chr11	-	2900	1	incomplete-splice_match	GAB2	ENST00000340149.6	6052	10	123683	1	13735	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	9432	False	AATAAA	-20
PB.226.8	chr1	+	3388	13	full-splice_match	PHACTR4	ENST00000373836.4	3107	13	-55	-226	-35	-16	multi-exon	FALSE	canonical	1	19541	junction_1	81202.86328024231	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	270	2408	100.0	-155	False	NA	NA
PB.12309.1	chrX	+	3965	12	incomplete-splice_match	MTMR1	ENST00000445323.6	4516	16	33705	178	2	0	5prime_fragment	FALSE	canonical	1	174804	junction_11	45088.056938754824	NA	7	NA	TRUE	NA	NA	NA	A	coding	573	1722	49	1770	10.0	8494	False	ATTAAA	-15
PB.10766.21	chr7	-	1859	3	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	-17	959	any annotated donor/acceptor	TRUE	canonical	1	211	junction_2	21673.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-10
PB.10766.23	chr7	-	1652	3	incomplete-splice_match	LHFPL3-AS1	ENST00000434579.6	1034	5	-15	2194	-15	683	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-24	True	NA	NA
PB.5242.1	chr17	+	2118	19	full-splice_match	NUP85	ENST00000245544.8	2121	19	1	2	1	-1	multi-exon	FALSE	canonical	1	320393	junction_6	118689.95927928839	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	71	2041	20.0	13	True	AATAAA	-17
PB.4335.6	chr16	+	2809	20	novel_not_in_catalog	EIF3C	novel	3128	21	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	88755.45648718903	NA	7	NA	TRUE	NA	NA	NA	C	coding	879	2640	86	2725	5.0	-10	True	ACTAAA	-17
PB.117.1	chr1	-	1543	5	full-splice_match	CPLANE2	ENST00000375599.7	1545	5	8	-6	8	6	multi-exon	FALSE	canonical	1	32476	junction_3	6253.004337916294	NA	1	NA	TRUE	NA	NA	NA	A	coding	258	777	413	1189	25.0	18	True	NA	NA
PB.5397.2	chr18	+	1461	1	full-splice_match	CHMP1B	ENST00000526991.2	3054	1	18	1575	18	-1476	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	196	591	108	698	45.0	0	True	ATTAAA	-41
PB.7314.2	chr20	+	2757	4	full-splice_match	SYS1	ENST00000426004.5	2915	4	0	158	0	-158	multi-exon	FALSE	canonical	1	1644	junction_3	141083.90681041154	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	181	411	40.0	-22	True	NA	NA
PB.7314.3	chr20	+	1650	4	full-splice_match	SYS1	ENST00000243918.9	2862	4	122	1090	-5	697	multi-exon	FALSE	canonical	1	117164	junction_1	104000.12524778783	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	170	640	25.0	-11	True	AATACA	-24
PB.8329.1	chr3	-	2567	1	antisense	novelGene_NDUFB4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.4335.7	chr16	+	3007	20	novel_in_catalog	EIF3C	novel	3128	21	NA	NA	2	0	intron_retention	FALSE	canonical	1	4648	junction_1	88416.04793508833	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	85	2430	5.0	-9	True	ACTAAA	-16
PB.5397.1	chr18	+	1736	1	full-splice_match	CHMP1B	ENST00000526991.2	3054	1	1	1317	1	-1218	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	196	591	125	715	30.0	2	True	AATAAA	-24
PB.7314.4	chr20	+	2846	4	full-splice_match	SYS1	ENST00000426004.5	2915	4	32	37	16	-37	multi-exon	FALSE	canonical	1	1644	junction_3	141083.90681041154	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	149	379	90.0	10	True	NA	NA
PB.7314.5	chr20	+	2612	3	full-splice_match	SYS1	ENST00000453003.1	433	3	29	-2208	29	-8	multi-exon	FALSE	canonical	1	333896	junction_2	3788.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	50	520	25.0	-22	True	NA	NA
PB.6632.8	chr2	+	1953	6	novel_in_catalog	CIAO1	novel	1533	7	NA	NA	-4	-84	intron_retention	FALSE	canonical	1	504384	junction_1	150056.8468219961	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	115	819	35.0	0	True	AGTAAA	-19
PB.6632.9	chr2	+	3939	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	102	-2508	-7	804	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	118	1137	90.0	-3	True	NA	NA
PB.712.1	chr1	-	4406	13	full-splice_match	SV2A	ENST00000369146.7	4416	13	-1	11	-1	-11	multi-exon	FALSE	canonical	1	107227	junction_6	75665.62097184928	NA	1	NA	TRUE	NA	NA	NA	C	coding	742	2229	493	2721	55.0	9919	False	AATAAA	-17
PB.11754.6	chr9	-	2549	1	novel_in_catalog	FBXW2	novel	2154	4	NA	NA	14903	-2230	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	NA	NA
PB.11754.7	chr9	-	5183	9	novel_not_in_catalog	FBXW2	novel	2154	4	NA	NA	13	-2230	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	161117.1563392905	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	176	1540	45.0	4	True	NA	NA
PB.11754.4	chr9	-	6827	8	novel_not_in_catalog	FBXW2	novel	2154	4	NA	NA	-17	-2230	any annotated donor/acceptor	FALSE	canonical	1	51186	junction_6	157179.64400828572	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	495	1472	45.0	-26	True	NA	NA
PB.11754.5	chr9	-	3368	1	novel_in_catalog	FBXW2	novel	2154	4	NA	NA	14079	-2235	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.11754.2	chr9	-	7164	8	novel_not_in_catalog	FBXW2	novel	2154	4	NA	NA	0	-2230	any annotated donor/acceptor	FALSE	canonical	1	9103	junction_6	166907.6794530682	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	349	1809	45.0	-9	True	NA	NA
PB.11754.3	chr9	-	6900	8	full-splice_match	FBXW2	ENST00000608872.5	9138	8	8	2230	8	-2230	multi-exon	FALSE	canonical	1	93453	junction_7	132079.66354949176	NA	1	1	TRUE	NA	NA	NA	C	coding	454	1365	181	1545	45.0	-1	True	NA	NA
PB.11754.8	chr9	-	2573	8	full-splice_match	FBXW2	ENST00000608872.5	9138	8	-2	6567	-2	-6567	multi-exon	FALSE	canonical	1	93453	junction_7	132079.66354949176	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	191	1555	40.0	-11	True	AATAAA	-13
PB.3346.6	chr14	-	3507	30	novel_not_in_catalog	IPO4	novel	3632	29	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	373	junction_8	147856.68442164428	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	30	2429	45.0	-20	True	AATAAA	-21
PB.7620.6	chr22	-	2362	13	full-splice_match	TRMT2A	ENST00000403707.7	2928	13	137	429	-10	0	multi-exon	FALSE	canonical	1	42843	junction_12	118360.97779779449	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	226	2103	25.0	-30	True	AATAAA	-13
PB.7620.7	chr22	-	2394	11	novel_in_catalog	TRMT2A	novel	2964	12	NA	NA	195	-3	intron_retention	FALSE	canonical	1	210637	junction_8	79598.73126934876	NA	4	NA	TRUE	NA	NA	NA	C	coding	536	1611	83	1693	30.0	-2	True	AATAAA	-10
PB.7620.4	chr22	-	2544	12	novel_in_catalog	TRMT2A	novel	2964	12	NA	NA	-5	1	intron_retention	FALSE	canonical	1	42843	junction_11	123621.15313875442	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	1385	2284	20.0	-25	True	AATAAA	-14
PB.7620.5	chr22	-	2220	12	full-splice_match	TRMT2A	ENST00000252136.11	2964	12	306	438	194	0	multi-exon	FALSE	canonical	1	210637	junction_9	76621.75818604439	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	84	1961	25.0	-3	True	AATAAA	-13
PB.7620.2	chr22	-	2785	13	full-splice_match	TRMT2A	ENST00000403707.7	2928	13	150	-7	-3	-2	multi-exon	TRUE	canonical	1	42843	junction_12	118360.97779779449	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	213	2090	15.0	-17	True	AATAAA	-22
PB.7620.3	chr22	-	2855	12	novel_not_in_catalog	AC006547.2	novel	526	2	NA	NA	-5362	-1049	intron_retention	FALSE	non_canonical	0	0	junction_7	159137.10106432447	NA	6	1	TRUE	NA	NA	NA	A	coding	338	1017	332	1348	15.0	-12	True	AATAAA	-20
PB.11514.5	chr9	+	2061	7	novel_in_catalog	GALT	novel	678	2	NA	NA	1	-3	intron_retention	FALSE	canonical	1	252069	junction_3	59970.3117376979	NA	1	NA	TRUE	NA	NA	NA	B	coding	251	756	1175	1930	35.0	-10	True	AATAAA	-19
PB.7620.8	chr22	-	2776	10	novel_in_catalog	TRMT2A	novel	2964	12	NA	NA	-9	-3	intron_retention	FALSE	canonical	1	210637	junction_7	83391.588827118	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	349	1959	30.0	-29	True	AATAAA	-10
PB.7620.9	chr22	-	2259	14	novel_not_in_catalog	TRMT2A	novel	2964	12	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	275	junction_9	147178.1977930075	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	219	2003	30.0	-23	True	AATAAA	-10
PB.6445.12	chr2	-	4978	15	full-splice_match	PREPL	ENST00000410081.5	3080	15	260	-2158	0	-1	multi-exon	FALSE	canonical	1	26317	junction_14	201018.68097899685	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	203	2386	20.0	1	True	ATTAAA	-15
PB.6445.13	chr2	-	4941	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	4001	junction_14	204681.85473201016	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	166	2349	20.0	1	True	ATTAAA	-15
PB.6445.11	chr2	-	5902	12	novel_in_catalog	PREPL	novel	5657	15	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	207717	junction_11	152090.59999213277	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	183	2072	20.0	2	True	ATTAAA	-15
PB.6445.16	chr2	-	5904	14	full-splice_match	PREPL	ENST00000541738.5	6049	14	-1009	1154	-1009	1	multi-exon	FALSE	canonical	1	57369	junction_13	174037.1216592707	NA	13	NA	TRUE	NA	NA	NA	C	coding	638	1917	1397	3313	20.0	-1067	False	ATTAAA	-14
PB.6445.17	chr2	-	5252	15	full-splice_match	PREPL	ENST00000409936.5	5212	15	-39	-1	13	1	multi-exon	FALSE	canonical	1	15460	junction_14	202788.7788815883	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	478	2661	20.0	271	False	ATTAAA	-14
PB.6445.14	chr2	-	4861	15	full-splice_match	PREPL	ENST00000409272.5	3030	15	231	-2062	-13	1	multi-exon	FALSE	canonical	1	3327	junction_14	204793.98175469876	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	87	2270	20.0	1	True	ATTAAA	-14
PB.254.2	chr1	-	3105	7	novel_in_catalog	TMEM234	novel	2736	4	NA	NA	-4	7	intron_retention	FALSE	canonical	1	27396	junction_4	45153.98452948409	NA	0	NA	TRUE	NA	NA	NA	B	coding	96	291	31	321	35.0	-7	True	AATATA	-25
PB.6445.18	chr2	-	5190	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	-14	1	no_combination_of_known_junctions	FALSE	canonical	1	1637	junction_14	205075.50759959026	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	416	2599	20.0	296	False	ATTAAA	-14
PB.6445.19	chr2	-	4808	15	novel_not_in_catalog	PREPL	novel	5657	15	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	4586	junction_14	237431.10833035252	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	305	2218	20.0	269	False	ATTAAA	-13
PB.1116.7	chr1	+	4272	8	novel_in_catalog	VASH2	novel	1369	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	9094	junction_2	25801.05042000248	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	631	1272	25.0	0	True	AATAAA	-18
PB.11864.15	chr9	-	6515	12	novel_not_in_catalog	RAPGEF1	novel	6085	24	NA	NA	-25075	9076	any annotated donor/acceptor	FALSE	canonical	1	4976	junction_11	203371.77007564862	NA	1	NA	TRUE	NA	NA	NA	B	coding	626	1881	333	2213	25.0	-17	True	ATTAAA	-19
PB.11357.27	chr8	-	1678	2	incomplete-splice_match	PTK2	ENST00000519881.5	863	3	2	10088	2	1066	3prime_fragment	FALSE	canonical	1	92123	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	795	False	NA	NA
PB.9228.4	chr5	-	4328	27	novel_not_in_catalog	DHX29	novel	4502	27	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	8042	junction_16	71444.46857537505	NA	0	NA	TRUE	NA	NA	NA	C	coding	1318	3957	131	4087	10.0	-10	True	AATAAA	-16
PB.9228.6	chr5	-	2800	11	incomplete-splice_match	DHX29	ENST00000504778.5	4557	27	1	26239	1	-12044	3prime_fragment	FALSE	canonical	1	99156	junction_3	59303.70907869086	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	121	2115	15.0	0	True	ATTAAA	-16
PB.9228.7	chr5	-	2416	11	incomplete-splice_match	DHX29	ENST00000504778.5	4557	27	10	26614	-10	-12419	3prime_fragment	FALSE	canonical	1	99156	junction_3	59303.70907869086	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	112	2106	30.0	9	True	AATATA	-15
PB.9228.1	chr5	-	4473	27	full-splice_match	DHX29	ENST00000251636.9	4502	27	29	0	1	0	multi-exon	TRUE	canonical	1	99156	junction_19	58621.74469554287	NA	0	NA	TRUE	NA	NA	NA	C	coding	1369	4110	121	4230	5.0	0	True	AATAAA	-18
PB.9228.2	chr5	-	4521	27	novel_in_catalog	DHX29	novel	4502	27	NA	NA	1	0	intron_retention	FALSE	canonical	1	15060	junction_11	70750.87574522295	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	121	2820	10.0	0	True	AATAAA	-17
PB.6149.2	chr19	+	1659	13	full-splice_match	PTOV1	ENST00000601675.5	1587	13	-70	-2	-4	0	multi-exon	FALSE	canonical	1	179129	junction_12	375251.13400080334	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	343	1425	5.0	-4	True	AATAAA	-17
PB.9228.8	chr5	-	1515	11	incomplete-splice_match	DHX29	ENST00000504778.5	4557	27	23	27502	3	11693	3prime_fragment	FALSE	canonical	1	99156	junction_3	59303.70907869086	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1416	99	1514	65.0	22	True	NA	NA
PB.5622.1	chr19	+	1450	8	full-splice_match	YJU2	ENST00000262962.11	1434	8	-19	3	-19	-3	multi-exon	FALSE	canonical	1	205311	junction_6	57043.668985672186	NA	0	NA	TRUE	NA	NA	NA	A	coding	323	972	88	1059	5.0	-50	False	AATAAA	-14
PB.7330.4	chr20	-	2580	6	novel_in_catalog	ZNF334	novel	3706	4	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	4523	junction_4	25563.365188488	NA	3	1	TRUE	NA	NA	NA	C	coding	679	2040	337	2376	55.0	-4	True	AATAAA	-17
PB.6880.8	chr2	+	2941	10	full-splice_match	ITGA4	ENST00000465522.5	1721	10	123	-1343	99	1343	multi-exon	FALSE	canonical	1	236407	junction_5	78385.98323270574	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	189	1289	40.0	-1	True	AATAAA	-20
PB.841.24	chr1	+	2562	11	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	295	junction_7	430273.5988236903	NA	18	1	TRUE	NA	NA	NA	C	coding	409	1230	1087	2316	30.0	-19	True	AATAAA	-20
PB.1116.1	chr1	+	4415	9	novel_not_in_catalog	VASH2	novel	1369	9	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	4903	junction_2	25822.71118336289	NA	4	NA	TRUE	NA	NA	NA	C	coding	276	831	586	1416	25.0	-127	False	AATAAA	-17
PB.7330.1	chr20	-	3561	5	full-splice_match	ZNF334	ENST00000347606.8	3890	5	-5	334	0	-334	multi-exon	FALSE	canonical	1	5194	junction_4	24899.055955999618	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	189	2231	15.0	-6	True	AATAAA	-14
PB.7072.1	chr2	+	3156	21	full-splice_match	DIS3L2	ENST00000325385.11	3501	21	124	221	-1	0	multi-exon	FALSE	canonical	1	95279	junction_1	23641.048670902903	NA	2	NA	TRUE	NA	NA	NA	C	coding	885	2658	153	2810	10.0	-6	True	AATAAA	-18
PB.7072.3	chr2	+	3938	20	incomplete-splice_match	DIS3L2	ENST00000325385.11	3501	21	150	7	25	-7	intron_retention	FALSE	canonical	1	95279	junction_1	22918.237626282193	NA	1	NA	TRUE	NA	NA	NA	C	coding	923	2772	127	2898	30.0	20	True	ATTAAA	-17
PB.7072.2	chr2	+	3376	21	full-splice_match	DIS3L2	ENST00000325385.11	3501	21	123	2	-2	-2	multi-exon	TRUE	canonical	1	95279	junction_1	23641.048670902903	NA	1	NA	TRUE	NA	NA	NA	C	coding	885	2658	154	2811	20.0	-7	True	ATTAAA	-22
PB.7330.2	chr20	-	2440	5	full-splice_match	ZNF334	ENST00000347606.8	3890	5	-3	1453	-2	3	multi-exon	FALSE	canonical	1	5194	junction_4	24899.055955999618	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	187	2229	50.0	-4	True	AATAAA	-24
PB.5579.1	chr19	-	1287	1	full-splice_match	AC012615.1	ENST00000565797.2	1299	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-1	True	TATAAA	-21
PB.7330.3	chr20	-	3625	7	novel_in_catalog	ZNF334	novel	3706	4	NA	NA	-15	2	no_combination_of_known_junctions	FALSE	canonical	1	562	junction_4	24690.039094181728	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	1487	3415	50.0	-21	True	AATAAA	-23
PB.6451.2	chr2	-	2349	1	novel_in_catalog	PIGF	novel	1372	6	NA	NA	4983	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-9
PB.841.25	chr1	+	3811	10	incomplete-splice_match	IFI16	ENST00000368132.7	2704	11	-9	-2	-9	0	intron_retention	FALSE	canonical	1	295	junction_7	336182.2951958294	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	274	2397	20.0	-18	True	AATAAA	-26
PB.10414.1	chr7	+	1867	6	full-splice_match	TSPAN13	ENST00000262067.4	2093	6	223	3	223	-3	multi-exon	FALSE	canonical	1	497683	junction_1	116120.68017472168	NA	2	NA	TRUE	NA	NA	NA	A	coding	204	615	211	825	35.0	-26	True	ATTAAA	-27
PB.8473.30	chr3	+	3973	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	1	118983	junction_1	328081.2097758486	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	267	1139	75.0	-3	True	TTTAAA	-6
PB.261.1	chr1	-	1576	7	full-splice_match	ZBTB8OS	ENST00000468695.5	1601	7	20	5	1	-5	multi-exon	FALSE	canonical	1	84063	junction_5	132244.62942550404	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	36	539	30.0	367	False	AATAAA	-14
PB.836.1	chr1	+	2390	1	antisense	novelGene_ETV3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	8604	False	NA	NA
PB.10015.2	chr6	+	3158	11	novel_in_catalog	HSP90AB1	novel	2644	12	NA	NA	10	-1	intron_retention	FALSE	canonical	1	1694090	junction_6	3001581.0065235356	NA	2	NA	TRUE	NA	NA	NA	C	coding	717	2154	721	2874	10.0	-4	True	AATAAA	-20
PB.11357.1	chr8	-	4841	33	novel_in_catalog	PTK2	novel	4955	32	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	4929	junction_31	147979.11306627648	NA	1	NA	TRUE	NA	NA	NA	C	coding	1096	3291	470	3760	0.0	792	False	ATTAAA	-35
PB.7795.3	chr22	+	4419	4	full-splice_match	SYNGR1	ENST00000328933.9	4391	4	-37	9	10	-9	multi-exon	FALSE	canonical	1	149807	junction_3	92250.49784508844	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	53	754	20.0	-32	True	AATAAA	-23
PB.7795.2	chr22	+	2353	3	novel_in_catalog	SYNGR1	novel	1361	4	NA	NA	9	5	intron_retention	FALSE	canonical	1	311253	junction_1	10237.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	54	488	20.0	-33	True	NA	NA
PB.7795.1	chr22	+	2832	3	novel_in_catalog	SYNGR1	novel	1361	4	NA	NA	-5	0	intron_retention	TRUE	canonical	1	311253	junction_1	10237.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	68	502	20.0	-47	True	NA	NA
PB.8397.20	chr3	+	3731	28	full-splice_match	ATP2C1	ENST00000510168.5	5067	28	229	1107	15	658	multi-exon	FALSE	canonical	1	56424	junction_1	239457.59833480822	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	322	3081	20.0	-8	True	AGTAAA	-23
PB.7795.7	chr22	+	4320	4	novel_not_in_catalog	SYNGR1	novel	1361	4	NA	NA	0	-14	any annotated donor/acceptor	TRUE	canonical	1	14243	junction_3	154965.3107268419	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	25	660	25.0	-4	True	AATAAA	-18
PB.7795.6	chr22	+	3727	2	full-splice_match	SYNGR1	ENST00000489206.1	1999	2	-28	-1700	-9	-1	multi-exon	FALSE	canonical	1	311253	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	34	468	15.0	-13	True	NA	NA
PB.7795.5	chr22	+	2698	3	incomplete-splice_match	SYNGR1	ENST00000318801.8	1361	4	52	11	-10	-3	intron_retention	FALSE	canonical	1	311253	junction_1	28098.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	35	568	25.0	-14	True	NA	NA
PB.7795.4	chr22	+	2247	3	incomplete-splice_match	SYNGR1	ENST00000318801.8	1361	4	35	479	11	-1	intron_retention	FALSE	canonical	1	311253	junction_1	28098.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	52	585	15.0	-31	True	NA	NA
PB.4412.10	chr16	-	2135	19	novel_not_in_catalog	ITFG1	novel	2636	10	NA	NA	203	-3	any annotated donor/acceptor	FALSE	canonical	1	4887	junction_12	207702.19052447827	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	27	1976	25.0	-16	True	AATAAA	-19
PB.4412.11	chr16	-	2569	11	novel_not_in_catalog	ITFG1	novel	2636	10	NA	NA	210	-43753	any annotated donor/acceptor	FALSE	canonical	1	184	junction_1	184202.1364315843	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	20	1120	20.0	-9	True	ATTAAA	-37
PB.4412.12	chr16	-	3251	10	incomplete-splice_match	ITFG1	ENST00000320640.10	3400	18	201	154700	201	-48427	3prime_fragment	FALSE	canonical	1	462161	junction_3	62248.302445394715	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	29	1102	95.0	-18	True	NA	NA
PB.4412.13	chr16	-	1054	6	novel_not_in_catalog	ITFG1	novel	3400	18	NA	NA	208	11103	any annotated donor/acceptor	FALSE	canonical	1	6149	junction_1	236767.291264144	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	22	690	20.0	-11	True	NA	NA
PB.7474.3	chr21	+	4370	7	novel_in_catalog	GABPA	novel	5120	10	NA	NA	-401	-4	no_combination_of_known_junctions	FALSE	canonical	1	16	junction_2	34871.06760944125	NA	5	1	TRUE	NA	NA	NA	C	coding	253	762	385	1146	10.0	11	True	AATAAA	-11
PB.7474.2	chr21	+	4721	10	full-splice_match	GABPA	ENST00000354828.7	5120	10	398	1	398	-1	multi-exon	FALSE	canonical	1	16	junction_5	29534.82999969885	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	130	1494	20.0	-4	True	AATAAA	-14
PB.7474.1	chr21	+	2240	10	full-splice_match	GABPA	ENST00000354828.7	5120	10	395	2485	395	-2485	multi-exon	FALSE	canonical	1	16	junction_5	29534.82999969885	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	133	1497	55.0	-7	True	AATAAA	-12
PB.7474.7	chr21	+	4841	10	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	-221	-1	any annotated donor/acceptor	FALSE	canonical	1	16	junction_5	28829.70322599186	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	250	1614	20.0	-33	True	AATAAA	-14
PB.7474.6	chr21	+	2659	11	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	-277	-2392	any annotated donor/acceptor	FALSE	canonical	1	16	junction_6	27597.41544782772	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	459	1823	15.0	-348	False	AATAAA	-16
PB.7474.5	chr21	+	2595	10	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	-290	-2485	any annotated donor/acceptor	FALSE	canonical	1	16	junction_5	29163.070361564816	NA	2	1	TRUE	NA	NA	NA	C	coding	454	1365	488	1852	55.0	-361	False	AATAAA	-12
PB.7474.4	chr21	+	4597	9	novel_in_catalog	GABPA	novel	5120	10	NA	NA	-395	-1	no_combination_of_known_junctions	FALSE	canonical	1	16	junction_4	30442.785200273644	NA	7	1	TRUE	NA	NA	NA	C	coding	253	762	609	1370	20.0	-466	False	AATAAA	-14
PB.7529.1	chr21	+	2519	2	novel_in_catalog	MX1	novel	762	5	NA	NA	3	208	intron_retention	FALSE	canonical	1	20241	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	2195	2503	10.0	-6948	False	NA	NA
PB.7474.9	chr21	+	2328	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	1	2485	1	-2485	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	221	1585	55.0	15	True	AATAAA	-12
PB.7474.8	chr21	+	4794	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	19	1	14	-1	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	203	1567	20.0	-52	False	AATAAA	-14
PB.7529.4	chr21	+	3359	19	full-splice_match	MX1	ENST00000398600.6	3470	19	110	1	110	0	multi-exon	FALSE	canonical	1	5541	junction_1	386604.7324657373	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	916	2904	10.0	-10	True	AATAAA	-17
PB.7529.5	chr21	+	2877	18	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	5082	junction_3	375014.53694544744	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	436	2424	15.0	-1	True	AATAAA	-15
PB.7529.6	chr21	+	2793	17	novel_in_catalog	MX1	novel	762	5	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	38906	junction_4	319803.75704543403	NA	2	1	TRUE	NA	NA	NA	C	coding	662	1989	352	2340	15.0	-1	True	AATAAA	-15
PB.7529.7	chr21	+	2720	16	novel_in_catalog	MX1	novel	762	5	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	26880	junction_13	384109.40702837374	NA	7	NA	TRUE	NA	NA	NA	C	coding	609	1830	436	2265	10.0	-1099	False	AATAAA	-17
PB.5266.2	chr17	-	2403	14	novel_in_catalog	RNF157	novel	4955	19	NA	NA	-22	0	no_combination_of_known_junctions	FALSE	canonical	1	209	junction_13	48210.565190875626	NA	0	NA	TRUE	NA	NA	NA	B	coding	352	1059	450	1508	85.0	-5	True	NA	NA
PB.5266.1	chr17	-	2488	15	incomplete-splice_match	RNF157	ENST00000269391.10	4955	19	73251	1887	-40	0	5prime_fragment	FALSE	canonical	1	103893	junction_2	26488.24356903358	NA	0	NA	TRUE	NA	NA	NA	B	coding	352	1059	535	1593	85.0	6652	False	NA	NA
PB.840.1	chr1	+	1729	7	full-splice_match	MNDA	ENST00000368141.4	1752	7	24	-1	-10	1	multi-exon	FALSE	canonical	1	538929	junction_1	160781.5733793314	NA	0	NA	TRUE	NA	NA	NA	A	coding	407	1224	238	1461	20.0	-28	True	AATAAA	-22
PB.2899.3	chr12	-	1805	3	novel_not_in_catalog	VPS29	novel	1523	4	NA	NA	3	-937	intron_retention	FALSE	canonical	1	251	junction_1	75890.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-4	True	NA	NA
PB.2899.2	chr12	-	1839	5	novel_not_in_catalog	VPS29	novel	1523	4	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	849619.897897988	NA	2	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-17
PB.2899.1	chr12	-	1099	4	novel_not_in_catalog	VPS29	novel	1523	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	75	junction_3	805390.6637391709	NA	2	1	TRUE	NA	NA	NA	B	coding	186	561	60	620	20.0	0	True	ATTAAA	-20
PB.4271.5	chr16	+	1850	8	novel_in_catalog	NDE1	novel	3936	10	NA	NA	0	843	intron_retention	FALSE	canonical	1	17323	junction_7	145351.06715291014	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	112	1149	85.0	-20	True	NA	NA
PB.4271.4	chr16	+	2515	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	0	1421	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	141693.0365756366	NA	19	NA	TRUE	NA	NA	NA	C	coding	346	1041	112	1152	20.0	-20	True	AATAAA	-14
PB.9564.2	chr5	+	1863	1	incomplete-splice_match	NDST1	ENST00000261797.6	8030	15	48235	2	3786	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	128	387	769	1155	15.0	NA	False	AATAAA	-16
PB.9564.1	chr5	+	2802	1	incomplete-splice_match	NDST1	ENST00000261797.6	8030	15	47297	1	2848	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	128	387	1707	2093	15.0	NA	False	AATAAA	-17
PB.2517.30	chr12	-	2183	12	novel_not_in_catalog	TM7SF3	novel	2709	12	NA	NA	0	430	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	249991.55565632827	NA	2	NA	TRUE	NA	NA	NA	C	coding	555	1668	217	1884	65.0	-1	True	ATTAAA	-11
PB.4271.7	chr16	+	2117	10	novel_in_catalog	NDE1	novel	3936	10	NA	NA	-9	843	intron_retention	FALSE	canonical	1	9428	junction_9	139574.2002301161	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	101	1141	85.0	-9	True	NA	NA
PB.6281.1	chr19	+	2480	17	full-splice_match	TRIM28	ENST00000253024.9	2960	17	479	1	-219	0	multi-exon	TRUE	canonical	1	1366005	junction_1	905346.8447996856	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	213	2318	5.0	-5260	False	AATAAA	-14
PB.1581.8	chr10	+	3538	11	novel_not_in_catalog	R3HCC1L	novel	3372	9	NA	NA	5	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	78554.22033118272	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	299	2101	5.0	18	True	ATTAAA	-22
PB.1581.9	chr10	+	2628	9	incomplete-splice_match	R3HCC1L	ENST00000298999.7	3379	10	6	8671	6	-8123	3prime_fragment	FALSE	canonical	1	21507	junction_2	69332.72123022073	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2331	298	2628	65.0	19	True	NA	NA
PB.10484.27	chr7	+	3414	4	incomplete-splice_match	SEPT7	ENST00000399035.7	4066	13	56039	1800	-1810	0	5prime_fragment	FALSE	canonical	1	408243	junction_1	200615.78469358344	NA	3	NA	TRUE	NA	NA	NA	C	coding	144	435	1968	2402	30.0	4814	False	AATAAA	-15
PB.10484.20	chr7	+	3341	14	novel_in_catalog	SEPT7	novel	509	4	NA	NA	12	-853	combination_of_known_junctions	FALSE	canonical	1	22545	junction_3	353847.1401331906	NA	2	1	TRUE	NA	NA	NA	C	coding	407	1224	159	1382	45.0	12	True	AATAAA	-31
PB.10484.21	chr7	+	1836	14	novel_not_in_catalog	SEPT7	novel	509	4	NA	NA	34	305	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	491272.73001681815	NA	2	1	TRUE	NA	NA	NA	C	coding	384	1155	170	1324	70.0	34	False	AATACA	-6
PB.1581.1	chr10	+	3515	11	novel_in_catalog	R3HCC1L	novel	3372	9	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	1	16347	junction_4	74589.42665043082	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	442	2778	10.0	2	True	ATTAAA	-18
PB.1581.2	chr10	+	3263	8	novel_in_catalog	R3HCC1L	novel	3372	9	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	1	7860	junction_1	67355.56490107448	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	190	2526	10.0	-21	False	ATTAAA	-18
PB.1581.3	chr10	+	3300	9	novel_in_catalog	R3HCC1L	novel	3372	9	NA	NA	-17	0	no_combination_of_known_junctions	FALSE	canonical	1	1784	junction_2	73509.4262237844	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	228	2564	15.0	-4	True	ATTAAA	-17
PB.1581.4	chr10	+	3393	10	full-splice_match	R3HCC1L	ENST00000298999.7	3379	10	-15	1	-15	-1	multi-exon	FALSE	canonical	1	21507	junction_2	68876.08474286392	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	319	2655	10.0	-2	True	ATTAAA	-19
PB.1581.5	chr10	+	3434	10	novel_in_catalog	R3HCC1L	novel	3372	9	NA	NA	-14	-1	no_combination_of_known_junctions	FALSE	canonical	1	16347	junction_3	74321.08784503315	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	360	2696	10.0	-1	True	ATTAAA	-19
PB.1581.6	chr10	+	3336	9	novel_in_catalog	R3HCC1L	novel	3372	9	NA	NA	-14	1	no_combination_of_known_junctions	FALSE	canonical	1	20007	junction_1	65316.04103977349	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	263	2599	10.0	-1	True	ATTAAA	-18
PB.1581.7	chr10	+	3135	7	novel_in_catalog	R3HCC1L	novel	3372	9	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	1542	junction_1	70152.76245075616	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	63	2399	15.0	1	True	ATTAAA	-17
PB.1602.8	chr10	+	1779	8	full-splice_match	HIF1AN	ENST00000299163.6	13011	8	84	11148	28	2269	multi-exon	FALSE	canonical	1	278261	junction_3	47956.70534972143	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	17	1066	30.0	0	True	CATAAA	-23
PB.1602.9	chr10	+	6760	8	novel_in_catalog	HIF1AN	novel	1042	6	NA	NA	29	-6081	combination_of_known_junctions	FALSE	canonical	1	10235	junction_1	120814.08086031381	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	252	980	30.0	1	True	NA	NA
PB.6373.8	chr2	+	2552	17	incomplete-splice_match	CAD	ENST00000403525.5	6900	43	19970	-2	-1740	2	5prime_fragment	FALSE	canonical	1	326658	junction_1	116439.54385496512	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	100	2283	35.0	4237	False	AATAAA	-21
PB.1602.1	chr10	+	2864	8	novel_in_catalog	HIF1AN	novel	1042	6	NA	NA	12	3423	combination_of_known_junctions	TRUE	canonical	1	10235	junction_1	120814.08086031381	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	269	997	20.0	-16	False	AATATA	-19
PB.1602.2	chr10	+	6860	8	full-splice_match	HIF1AN	ENST00000299163.6	13011	8	75	6076	19	-6076	multi-exon	FALSE	canonical	1	278261	junction_3	47956.70534972143	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	26	1075	30.0	-9	True	NA	NA
PB.1602.3	chr10	+	2668	7	incomplete-splice_match	HIF1AN	ENST00000299163.6	13011	8	618	10000	7	3417	5prime_fragment	FALSE	canonical	1	278261	junction_2	48445.12745622618	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	79	807	30.0	534	False	AATATA	-13
PB.1602.4	chr10	+	4175	8	full-splice_match	HIF1AN	ENST00000299163.6	13011	8	81	8755	25	4662	multi-exon	FALSE	canonical	1	278261	junction_3	47956.70534972143	NA	4	NA	TRUE	NA	NA	NA	C	coding	349	1050	20	1069	25.0	-3	True	NA	NA
PB.1602.5	chr10	+	2936	8	full-splice_match	HIF1AN	ENST00000299163.6	13011	8	82	9993	26	3424	multi-exon	FALSE	canonical	1	278261	junction_3	47956.70534972143	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	19	1068	20.0	-2	True	AATATA	-20
PB.1602.6	chr10	+	7573	8	full-splice_match	HIF1AN	ENST00000299163.6	13011	8	83	5355	27	-5355	multi-exon	FALSE	canonical	1	278261	junction_3	47956.70534972143	NA	3	NA	TRUE	NA	NA	NA	C	coding	349	1050	18	1067	65.0	-1	True	NA	NA
PB.1602.7	chr10	+	7126	7	novel_in_catalog	HIF1AN	novel	1042	6	NA	NA	28	-6076	intron_retention	FALSE	canonical	1	278261	junction_2	48445.12745622618	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	613	1341	30.0	0	True	NA	NA
PB.3092.7	chr13	+	7212	7	novel_in_catalog	USPL1	novel	1133	3	NA	NA	-11	1	intron_retention	FALSE	canonical	1	109880	junction_5	15407.609793720621	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	4283	7018	5.0	6	True	ATTAAA	-16
PB.3092.6	chr13	+	3513	8	novel_in_catalog	USPL1	novel	1133	3	NA	NA	-16	4	combination_of_known_junctions	FALSE	canonical	1	63105	junction_1	30095.24368889339	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	581	3316	5.0	1	True	ATTAAA	-19
PB.3092.5	chr13	+	3677	9	full-splice_match	USPL1	ENST00000255304.8	3814	9	138	-1	-16	1	multi-exon	FALSE	canonical	1	31156	junction_1	45562.370290453226	NA	1	NA	TRUE	NA	NA	NA	C	coding	1091	3276	208	3483	5.0	1	True	ATTAAA	-16
PB.3092.4	chr13	+	2380	9	full-splice_match	USPL1	ENST00000255304.8	3814	9	137	1297	-17	-1297	multi-exon	FALSE	canonical	1	31156	junction_1	45562.370290453226	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2172	209	2380	65.0	0	True	ATTAAA	-35
PB.3092.3	chr13	+	4721	8	novel_in_catalog	USPL1	novel	1133	3	NA	NA	-17	-10	combination_of_known_junctions	FALSE	canonical	1	63105	junction_1	30095.24368889339	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	582	3317	35.0	0	True	AATAAA	-22
PB.3092.2	chr13	+	4897	9	full-splice_match	USPL1	ENST00000255304.8	3814	9	137	-1220	-17	-1	multi-exon	FALSE	canonical	1	31156	junction_1	45562.370290453226	NA	2	NA	TRUE	NA	NA	NA	C	coding	1091	3276	209	3484	15.0	0	True	AATAAA	-31
PB.3092.1	chr13	+	2160	8	novel_in_catalog	USPL1	novel	1133	3	NA	NA	-16	-1349	combination_of_known_junctions	FALSE	canonical	1	63105	junction_1	30095.24368889339	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1578	581	2158	65.0	1	True	AAAACA	-13
PB.7402.1	chr20	+	2409	7	full-splice_match	OGFR	ENST00000290291.10	2410	7	0	1	0	-1	multi-exon	FALSE	canonical	1	452291	junction_1	127860.07170438315	NA	0	NA	TRUE	NA	NA	NA	A	coding	677	2034	26	2059	15.0	0	True	AATAAA	-15
PB.3092.9	chr13	+	6356	1	novel_in_catalog	USPL1	novel	1133	3	NA	NA	16	-7166	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.3092.8	chr13	+	3622	9	novel_not_in_catalog	USPL1	novel	1133	3	NA	NA	-4	1	any annotated donor/acceptor	FALSE	canonical	1	3836	junction_4	59028.03100805159	NA	5	NA	TRUE	NA	NA	NA	C	coding	763	2292	1137	3428	5.0	-938	False	ATTAAA	-16
PB.9590.23	chr5	+	2284	6	incomplete-splice_match	CYFIP2	ENST00000618329.4	4256	31	54616	58176	37	-6041	internal_fragment	FALSE	canonical	1	413878	junction_3	133473.8015147542	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	183	728	65.0	NA	False	NA	NA
PB.74.1	chr1	+	3108	3	full-splice_match	SPSB1	ENST00000328089.10	3120	3	14	-2	14	2	multi-exon	FALSE	canonical	1	50082	junction_1	61998.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	273	822	328	1149	15.0	0	True	AATAAA	-26
PB.6014.6	chr19	+	4419	15	full-splice_match	HNRNPUL1	ENST00000392006.7	3555	15	-1222	358	438	-1	multi-exon	FALSE	canonical	1	692087	junction_1	447819.3468111355	NA	1	NA	TRUE	NA	NA	NA	C	coding	856	2571	1396	3966	70.0	-1972	False	NA	NA
PB.6014.7	chr19	+	2846	15	full-splice_match	HNRNPUL1	ENST00000392006.7	3555	15	352	357	-164	0	multi-exon	FALSE	canonical	1	692087	junction_1	447819.3468111355	NA	3	1	TRUE	NA	NA	NA	C	coding	756	2271	122	2392	75.0	-398	False	NA	NA
PB.6014.4	chr19	+	2754	15	full-splice_match	HNRNPUL1	ENST00000595018.5	2794	15	40	0	29	0	multi-exon	FALSE	canonical	1	117488	junction_1	553787.9036274278	NA	15	3	TRUE	NA	NA	NA	C	coding	756	2271	30	2300	75.0	2	True	NA	NA
PB.6014.5	chr19	+	2786	15	full-splice_match	HNRNPUL1	ENST00000352456.7	3426	15	61	579	27	0	multi-exon	FALSE	canonical	1	117488	junction_1	662251.5217722749	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	32	2332	75.0	0	True	NA	NA
PB.6014.2	chr19	+	2596	14	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	28271	junction_13	723846.5373476709	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	64	2142	75.0	2	True	NA	NA
PB.6014.3	chr19	+	3410	15	full-splice_match	HNRNPUL1	ENST00000595018.5	2794	15	37	-653	26	74	multi-exon	FALSE	canonical	1	117488	junction_1	553787.9036274278	NA	23	NA	TRUE	NA	NA	NA	C	coding	756	2271	33	2303	40.0	-1	True	AATAAA	-20
PB.11401.1	chr8	-	4504	38	full-splice_match	CPSF1	ENST00000616140.1	4494	38	-17	7	-17	-7	multi-exon	FALSE	canonical	1	254023	junction_37	184832.44762852677	NA	17	1	TRUE	NA	NA	NA	C	coding	1443	4332	93	4424	15.0	5	True	AAAACA	-18
PB.6014.1	chr19	+	3155	15	full-splice_match	HNRNPUL1	ENST00000595018.5	2794	15	4	-365	4	8	multi-exon	FALSE	canonical	1	117488	junction_1	553787.9036274278	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	66	2336	5.0	0	True	NA	NA
PB.5798.4	chr19	+	1811	6	full-splice_match	HSH2D	ENST00000593031.1	585	6	-22	-1204	-1	-31	multi-exon	FALSE	canonical	1	6479	junction_2	110823.22485472077	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	89	1072	80.0	-14	True	NA	NA
PB.5798.5	chr19	+	1876	6	full-splice_match	HSH2D	ENST00000613986.4	1957	6	39	42	9	-31	multi-exon	FALSE	canonical	1	203827	junction_3	39713.36972053618	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	79	1137	80.0	-4	True	NA	NA
PB.10179.1	chr6	+	1200	8	full-splice_match	RWDD1	ENST00000487832.6	1427	8	-98	325	-18	-325	multi-exon	FALSE	canonical	1	136192	junction_7	179895.64803677556	NA	0	NA	TRUE	NA	NA	NA	A	coding	147	444	595	1038	50.0	-16	True	AATAAA	-15
PB.6874.7	chr2	+	3241	6	novel_not_in_catalog	TTN-AS1	novel	945	4	NA	NA	0	410	intron_retention	FALSE	canonical	1	1801	junction_5	28192.711805713192	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	812	1195	30.0	2	True	AGTAAA	-18
PB.5798.1	chr19	+	2448	6	full-splice_match	HSH2D	ENST00000616070.4	2473	6	-6	31	0	-31	multi-exon	TRUE	canonical	1	16466	junction_2	130442.41773073665	NA	1	1	TRUE	NA	NA	NA	C	coding	290	873	837	1709	80.0	-43	True	NA	NA
PB.5798.2	chr19	+	1719	5	novel_not_in_catalog	HSH2D	novel	2366	8	NA	NA	0	-208	intron_retention	TRUE	canonical	1	77493	junction_3	94704.61501294433	NA	2	NA	TRUE	NA	NA	NA	C	coding	175	528	1046	1573	15.0	-43	True	AATAAA	-18
PB.5798.3	chr19	+	2306	5	novel_in_catalog	HSH2D	novel	2366	8	NA	NA	0	-31	intron_retention	FALSE	canonical	1	256185	junction_4	24614.792812199335	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	695	1567	80.0	-33	True	NA	NA
PB.5157.1	chr17	-	5665	20	full-splice_match	HEATR6	ENST00000184956.10	3932	20	1	-1734	1	1734	multi-exon	FALSE	canonical	1	86387	junction_12	42599.82788951226	NA	2	NA	TRUE	NA	NA	NA	C	coding	1181	3546	17	3562	85.0	-10	True	AATACA	-29
PB.5157.3	chr17	-	3934	20	full-splice_match	HEATR6	ENST00000184956.10	3932	20	1	-3	1	3	multi-exon	FALSE	canonical	1	86387	junction_12	42599.82788951226	NA	0	NA	TRUE	NA	NA	NA	C	coding	1181	3546	17	3562	15.0	-10	True	AATAAA	-17
PB.5157.2	chr17	-	5581	21	novel_not_in_catalog	HEATR6	novel	3932	20	NA	NA	0	1734	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	54757.52744865312	NA	1	1	TRUE	NA	NA	NA	C	coding	1181	3546	8	3553	85.0	-1	True	AATACA	-29
PB.5157.4	chr17	-	3776	19	novel_in_catalog	HEATR6	novel	3932	20	NA	NA	1	-14	combination_of_known_junctions	FALSE	canonical	1	8522	junction_17	54324.38715056021	NA	1	NA	TRUE	NA	NA	NA	C	coding	1134	3405	17	3421	45.0	-10	True	NA	NA
PB.3768.2	chr15	-	4464	3	full-splice_match	GPR176	ENST00000561100.1	2816	3	-55	-1593	-55	-105	multi-exon	FALSE	canonical	1	112472	junction_2	23777.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	515	1548	922	2469	15.0	-12	True	AATAAA	-21
PB.3768.1	chr15	-	4318	2	novel_in_catalog	AC023908.2	novel	318	3	NA	NA	-119610	-28467	no_combination_of_known_junctions	FALSE	canonical	1	23002	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	352	1059	1154	2212	35.0	-8	True	AATAAA	-10
PB.6121.6	chr19	+	2654	6	novel_in_catalog	SPHK2	novel	2963	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	7871	junction_1	81485.73579565936	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	165	2021	10.0	-3214	False	AATAAA	-24
PB.4530.1	chr16	+	3902	24	full-splice_match	FUK	ENST00000288078.10	4081	24	178	1	4	0	multi-exon	FALSE	canonical	1	25698	junction_1	26744.248188785656	NA	0	NA	TRUE	NA	NA	NA	A	coding	1084	3255	55	3309	25.0	4	True	AATAAA	-17
PB.6898.9	chr2	+	2552	5	novel_in_catalog	ASNSD1	novel	968	6	NA	NA	22	0	intron_retention	FALSE	canonical	1	346190	junction_2	92774.01255032305	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	349	1818	15.0	26	True	TTTAAA	-6
PB.6121.5	chr19	+	2711	6	incomplete-splice_match	SPHK2	ENST00000598088.5	2866	7	866	1	-115	-1	5prime_fragment	FALSE	canonical	1	98097	junction_1	57093.008829453014	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	116	2080	10.0	-7150	False	AATAAA	-22
PB.6898.2	chr2	+	2699	6	full-splice_match	ASNSD1	ENST00000260952.8	2450	6	5	-254	5	254	multi-exon	FALSE	canonical	1	346190	junction_2	89768.41423351534	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	409	2340	85.0	-34	True	NA	NA
PB.6898.3	chr2	+	2361	6	novel_in_catalog	ASNSD1	novel	968	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	97703	junction_2	174215.70260180338	NA	34	NA	TRUE	NA	NA	NA	C	coding	643	1932	326	2257	20.0	3	True	TTTAAA	-5
PB.6121.4	chr19	+	2865	7	full-splice_match	SPHK2	ENST00000598088.5	2866	7	0	1	0	-1	multi-exon	FALSE	canonical	1	40333	junction_1	67556.62526026263	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	270	2234	10.0	0	True	AATAAA	-22
PB.6898.6	chr2	+	2782	6	novel_in_catalog	ASNSD1	novel	968	6	NA	NA	-1	420	combination_of_known_junctions	FALSE	canonical	1	97703	junction_2	174215.70260180338	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	326	2257	85.0	3	True	NA	NA
PB.6898.7	chr2	+	1459	4	full-splice_match	ASNSD1	ENST00000607829.5	581	4	-41	-837	17	-643	multi-exon	FALSE	canonical	1	346190	junction_2	99807.46081330795	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1104	354	1457	65.0	21	True	AAGAAA	-26
PB.6898.4	chr2	+	2206	6	full-splice_match	ASNSD1	ENST00000260952.8	2450	6	39	205	0	-24	multi-exon	FALSE	canonical	1	346190	junction_2	89768.41423351534	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1830	375	2204	65.0	0	True	NA	NA
PB.6898.5	chr2	+	2830	6	full-splice_match	ASNSD1	ENST00000260952.8	2450	6	40	-420	1	420	multi-exon	FALSE	canonical	1	346190	junction_2	89768.41423351534	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	374	2305	85.0	1	True	NA	NA
PB.490.19	chr1	+	1314	6	novel_in_catalog	IFI44L	novel	554	3	NA	NA	0	-415	no_combination_of_known_junctions	FALSE	canonical	1	24300	junction_1	179628.81608093955	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	170	739	95.0	21	True	NA	NA
PB.490.18	chr1	+	2489	5	novel_in_catalog	IFI44L	novel	554	3	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	1	9456	junction_4	174243.009719185	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	118	885	50.0	17	True	AATAAA	-22
PB.490.11	chr1	+	2189	9	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	-1	-231	any annotated donor/acceptor	FALSE	canonical	1	17611	junction_5	171506.7931434769	NA	4	NA	TRUE	NA	NA	NA	C	coding	431	1296	135	1430	80.0	0	True	NA	NA
PB.490.10	chr1	+	2212	10	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	-1	-415	any annotated donor/acceptor	FALSE	canonical	1	1675	junction_2	186542.71171589897	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	279	1637	95.0	0	True	NA	NA
PB.490.13	chr1	+	3601	8	novel_in_catalog	IFI44L	novel	554	3	NA	NA	8	-415	intron_retention	FALSE	canonical	1	130560	junction_1	135282.85310732157	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	126	1076	95.0	9	True	NA	NA
PB.490.12	chr1	+	2470	9	full-splice_match	IFI44L	ENST00000370751.9	5874	9	52	3352	6	-6	multi-exon	FALSE	canonical	1	130560	junction_1	126586.90072707957	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	128	1486	35.0	7	True	AATAAA	-13
PB.490.15	chr1	+	1571	8	novel_in_catalog	IFI44L	novel	554	3	NA	NA	8	-415	combination_of_known_junctions	FALSE	canonical	1	187581	junction_1	111348.98566476225	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	427	996	95.0	9	True	NA	NA
PB.490.14	chr1	+	3294	3	incomplete-splice_match	IFI44L	ENST00000370751.9	5874	9	54	14504	8	-6	intron_retention	FALSE	canonical	1	130560	junction_1	61606.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	126	656	50.0	9	True	AATAAA	-22
PB.490.17	chr1	+	3847	2	incomplete-splice_match	IFI44L	ENST00000452835.1	554	3	537	-3432	10	-8	5prime_fragment	FALSE	canonical	1	130560	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	124	609	50.0	11	True	AATAAA	-20
PB.490.16	chr1	+	1692	8	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	8	-231	any annotated donor/acceptor	FALSE	canonical	1	17611	junction_4	172914.14754880703	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	427	933	80.0	9	True	NA	NA
PB.3358.4	chr14	+	6153	8	full-splice_match	KHNYN	ENST00000556842.5	2443	8	12	-3722	9	-495	multi-exon	FALSE	canonical	1	27975	junction_1	127552.93290462367	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	63	2099	25.0	-7	True	NA	NA
PB.4988.3	chr17	-	5062	19	full-splice_match	STAT5B	ENST00000293328.7	5103	19	31	10	31	-10	multi-exon	FALSE	canonical	1	4965	junction_13	169116.7708102421	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	139	2502	15.0	-1	True	AATAAA	-17
PB.4988.4	chr17	-	3758	19	full-splice_match	STAT5B	ENST00000293328.7	5103	19	37	1308	37	-1308	multi-exon	FALSE	canonical	1	4965	junction_13	169116.7708102421	NA	1	NA	TRUE	NA	NA	NA	C	coding	787	2364	133	2496	75.0	5	True	GATAAA	-6
PB.1244.3	chr1	+	2168	12	full-splice_match	SCCPDH	ENST00000366510.3	2503	12	334	1	334	-1	multi-exon	FALSE	canonical	1	516780	junction_1	192339.4113447105	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	43	1332	25.0	-31	True	AATAAA	-18
PB.7271.1	chr20	+	2974	7	full-splice_match	DLGAP4	ENST00000475894.5	3110	7	130	6	0	-2	multi-exon	FALSE	canonical	1	146297	junction_1	194239.49938385055	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	517	1374	20.0	0	True	NA	NA
PB.7271.2	chr20	+	1424	7	full-splice_match	DLGAP4	ENST00000475894.5	3110	7	116	1570	-14	8	multi-exon	FALSE	canonical	1	146297	junction_1	194239.49938385055	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	531	1388	65.0	-735	False	AAGAAA	-16
PB.7271.3	chr20	+	4454	5	novel_in_catalog	DLGAP4	novel	5056	13	NA	NA	-1	8	intron_retention	FALSE	canonical	1	146297	junction_1	223629.64791187126	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	3561	4418	65.0	-1	True	AAGAAA	-16
PB.7271.4	chr20	+	1574	7	full-splice_match	DLGAP4	ENST00000475894.5	3110	7	130	1406	0	0	multi-exon	FALSE	canonical	1	146297	junction_1	194239.49938385055	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	517	1374	75.0	0	True	NA	NA
PB.7271.5	chr20	+	3078	8	novel_in_catalog	DLGAP4	novel	5056	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	5211	junction_1	288500.64798165835	NA	11	NA	TRUE	NA	NA	NA	C	coding	285	858	620	1477	25.0	0	True	NA	NA
PB.7271.6	chr20	+	4616	5	novel_in_catalog	DLGAP4	novel	5056	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	146297	junction_1	223629.64791187126	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	3559	4416	75.0	1	True	NA	NA
PB.7271.7	chr20	+	2473	7	full-splice_match	DLGAP4	ENST00000475894.5	3110	7	131	506	1	-502	multi-exon	FALSE	canonical	1	146297	junction_1	194239.49938385055	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	516	1373	5.0	1	True	AATATA	-17
PB.7271.8	chr20	+	3913	8	novel_not_in_catalog	DLGAP4	novel	5056	13	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_1	242908.60287753984	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	948	2309	20.0	0	True	NA	NA
PB.7271.9	chr20	+	2381	8	novel_not_in_catalog	DLGAP4	novel	5056	13	NA	NA	9	42	intron_retention	FALSE	non_canonical	0	0	junction_1	242908.60287753984	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	950	2311	15.0	1	True	ATTAAA	-32
PB.1244.1	chr1	+	1863	12	full-splice_match	SCCPDH	ENST00000366510.3	2503	12	334	306	334	-306	multi-exon	FALSE	canonical	1	516780	junction_1	192339.4113447105	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	43	1332	20.0	-31	True	AATAAA	-14
PB.7514.4	chr21	+	2399	15	novel_not_in_catalog	MORC3	novel	1028	8	NA	NA	15782	30678	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	66275.09700333166	NA	0	NA	TRUE	NA	NA	NA	B	coding	600	1803	137	1939	10.0	1	True	ATTAAA	-12
PB.10652.1	chr7	+	5040	30	novel_not_in_catalog	ADAM22	novel	9334	30	NA	NA	3	1773	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	27834.35647890086	NA	6	1	TRUE	NA	NA	NA	B	coding	880	2643	321	2963	35.0	-105	False	AATAAA	-14
PB.5147.2	chr17	+	2982	4	full-splice_match	SMG8	ENST00000300917.9	3263	4	257	24	245	-16	multi-exon	FALSE	canonical	1	172236	junction_2	20515.529099251184	NA	0	NA	TRUE	NA	NA	NA	A	coding	642	1929	833	2761	65.0	232	False	AATAAA	-16
PB.5147.3	chr17	+	2498	4	novel_not_in_catalog	AC099850.2	novel	557	3	NA	NA	12471	-3	any annotated donor/acceptor	FALSE	canonical	1	1041	junction_1	93726.02403815069	NA	0	NA	TRUE	NA	NA	NA	B	coding	753	2262	16	2277	65.0	2	True	AATAAA	-16
PB.6298.14	chr2	-	5094	25	novel_in_catalog	KIDINS220	novel	8735	30	NA	NA	0	-34	intron_retention	FALSE	canonical	1	144075	junction_24	63623.87099565872	NA	0	NA	TRUE	NA	NA	NA	B	coding	1179	3540	171	3710	85.0	-1	True	NA	NA
PB.5147.1	chr17	+	3456	4	novel_in_catalog	AC099850.2	novel	557	3	NA	NA	12447	-3	no_combination_of_known_junctions	FALSE	canonical	1	2549	junction_1	93030.23646941652	NA	0	NA	TRUE	NA	NA	NA	B	coding	588	1767	40	1806	65.0	-22	True	AATAAA	-16
PB.6298.12	chr2	-	5769	29	novel_in_catalog	KIDINS220	novel	8735	30	NA	NA	-2	-184	combination_of_known_junctions	FALSE	canonical	1	106849	junction_24	82588.80699147742	NA	3	NA	TRUE	NA	NA	NA	B	coding	1753	5262	173	5434	70.0	-3	True	TATAAA	-37
PB.6298.13	chr2	-	4727	29	novel_in_catalog	KIDINS220	novel	8735	30	NA	NA	0	528	combination_of_known_junctions	FALSE	canonical	1	106849	junction_24	82588.80699147742	NA	0	NA	TRUE	NA	NA	NA	B	coding	1519	4557	171	4727	65.0	-1	True	NA	NA
PB.6298.11	chr2	-	6249	29	novel_in_catalog	KIDINS220	novel	8735	30	NA	NA	-1	300	combination_of_known_junctions	FALSE	canonical	1	144075	junction_28	74388.58198499633	NA	0	NA	TRUE	NA	NA	NA	B	coding	1752	5259	172	5430	70.0	-2	True	TTTAAA	-37
PB.6201.6	chr19	+	2146	5	full-splice_match	ZNF331	ENST00000512387.6	2161	5	12	3	12	0	multi-exon	FALSE	canonical	1	14759	junction_1	56699.25622528041	NA	1	1	TRUE	NA	NA	NA	C	coding	463	1392	321	1712	85.0	-9586	False	NA	NA
PB.6201.4	chr19	+	1873	6	full-splice_match	ZNF331	ENST00000411977.6	2248	6	67	308	1	-3	multi-exon	FALSE	canonical	1	42023	junction_1	42521.22265692744	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	356	1747	20.0	1	True	NA	NA
PB.6201.5	chr19	+	3358	5	full-splice_match	ZNF331	ENST00000512387.6	2161	5	-8	-1189	-8	-624	multi-exon	FALSE	canonical	1	14759	junction_1	56699.25622528041	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	341	1732	20.0	-9606	False	NA	NA
PB.6201.2	chr19	+	2203	6	full-splice_match	ZNF331	ENST00000411977.6	2248	6	45	0	-19	0	multi-exon	FALSE	canonical	1	42023	junction_1	42521.22265692744	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	378	1769	85.0	-339	False	NA	NA
PB.6201.3	chr19	+	3380	6	full-splice_match	ZNF331	ENST00000411977.6	2248	6	66	-1198	0	-618	multi-exon	FALSE	canonical	1	42023	junction_1	42521.22265692744	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	357	1748	20.0	0	True	NA	NA
PB.6201.1	chr19	+	3227	7	full-splice_match	ZNF331	ENST00000253144.13	5042	7	-68	1883	8	0	multi-exon	FALSE	canonical	1	40740	junction_2	41786.799615894124	NA	12	NA	TRUE	NA	NA	NA	C	coding	463	1392	1402	2793	85.0	-292	False	NA	NA
PB.5484.1	chr18	+	3135	4	full-splice_match	ELAC1	ENST00000269466.7	2235	4	-29	-871	-4	871	multi-exon	FALSE	canonical	1	44696	junction_1	20609.104918835157	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	137	1228	100.0	-53	False	NA	NA
PB.5484.2	chr18	+	2706	1	genic	AC091551.1_ELAC1	novel	NA	NA	NA	NA	-2	828	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-51	False	NA	NA
PB.5484.3	chr18	+	2231	4	full-splice_match	ELAC1	ENST00000269466.7	2235	4	3	1	3	-1	multi-exon	FALSE	canonical	1	44696	junction_1	20609.104918835157	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	105	1196	30.0	-21	True	AATAAA	-17
PB.5484.4	chr18	+	1391	4	full-splice_match	ELAC1	ENST00000269466.7	2235	4	5	839	5	336	multi-exon	FALSE	canonical	1	44696	junction_1	20609.104918835157	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	103	1194	30.0	-19	True	AATAAA	-19
PB.5484.5	chr18	+	1818	4	full-splice_match	ELAC1	ENST00000588577.5	694	4	46	-1170	-8	-5	multi-exon	FALSE	canonical	1	26970	junction_2	28888.559407950175	NA	0	NA	TRUE	NA	NA	NA	C	coding	88	267	87	353	40.0	-3	True	AATAAA	-13
PB.5484.6	chr18	+	3323	13	novel_in_catalog	ELAC1	novel	694	4	NA	NA	0	91651	no_combination_of_known_junctions	FALSE	canonical	1	7665	junction_2	154031.2783355624	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	369	2018	45.0	8	True	AATAAA	-12
PB.5484.7	chr18	+	3401	13	novel_not_in_catalog	AC091551.1	novel	1228	9	NA	NA	62179	21634	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	143471.4501288545	NA	0	NA	TRUE	NA	NA	NA	A	coding	549	1650	441	2090	30.0	-20	False	AATAAA	-18
PB.7087.4	chr2	+	1721	9	full-splice_match	COPS8	ENST00000392008.6	1654	9	7	-74	3	74	multi-exon	FALSE	canonical	1	31653	junction_1	143920.70063748432	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	289	771	35.0	-25	True	NA	NA
PB.1148.8	chr1	+	4783	5	full-splice_match	FBXO28	ENST00000366862.9	5451	5	24	644	0	-644	multi-exon	FALSE	canonical	1	239742	junction_3	27249.009527870916	NA	6	NA	TRUE	NA	NA	NA	C	coding	368	1107	20	1126	20.0	-8	True	AATAAA	-23
PB.1148.5	chr1	+	4490	5	full-splice_match	FBXO28	ENST00000366862.9	5451	5	20	941	-4	-941	multi-exon	FALSE	canonical	1	239742	junction_3	27249.009527870916	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	24	1130	30.0	-12	True	AATAAA	-20
PB.1148.4	chr1	+	2705	5	full-splice_match	FBXO28	ENST00000366862.9	5451	5	8	2738	8	1127	multi-exon	FALSE	canonical	1	239742	junction_3	27249.009527870916	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	36	1142	25.0	-24	True	AATAAA	-31
PB.1148.7	chr1	+	5292	4	full-splice_match	FBXO28	ENST00000523990.1	1415	4	-12	-3865	-4	0	multi-exon	FALSE	canonical	1	4793	junction_2	139678.2243324516	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	506	991	10.0	-12	True	AATAAA	-17
PB.1148.6	chr1	+	2976	6	novel_not_in_catalog	FBXO28	novel	5451	5	NA	NA	-4	-89	any annotated donor/acceptor	FALSE	canonical	1	2590	junction_5	115312.46606919826	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	24	1130	45.0	-12	True	AATAAA	-26
PB.1148.1	chr1	+	5437	5	full-splice_match	FBXO28	ENST00000366862.9	5451	5	16	-2	-8	2	multi-exon	FALSE	canonical	1	239742	junction_3	27249.009527870916	NA	27	NA	TRUE	NA	NA	NA	C	coding	368	1107	28	1134	10.0	-16	True	AATAAA	-19
PB.1148.3	chr1	+	2871	5	full-splice_match	FBXO28	ENST00000366862.9	5451	5	27	2553	3	1312	multi-exon	FALSE	canonical	1	239742	junction_3	27249.009527870916	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	17	1123	15.0	-5	True	CATAAA	-17
PB.1148.2	chr1	+	2801	4	full-splice_match	FBXO28	ENST00000523990.1	1415	4	-31	-1355	1	1355	multi-exon	TRUE	canonical	1	4793	junction_2	139678.2243324516	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	525	1010	50.0	-31	True	AATAAA	-10
PB.4174.4	chr16	+	2575	15	novel_not_in_catalog	E4F1	novel	2573	14	NA	NA	41	0	any annotated donor/acceptor	FALSE	canonical	1	933	junction_2	133316.33685811094	NA	13	3	TRUE	NA	NA	NA	C	coding	284	855	522	1376	15.0	5	True	AATAAA	-15
PB.4174.3	chr16	+	2646	14	novel_in_catalog	E4F1	novel	2573	14	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	1	10384	junction_1	107140.72185941355	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	189	2477	15.0	0	True	AATAAA	-15
PB.4174.2	chr16	+	2486	14	full-splice_match	E4F1	ENST00000301727.8	2573	14	85	2	36	-1	multi-exon	FALSE	canonical	1	104234	junction_1	93528.25813573845	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	438	2318	15.0	0	True	AATAAA	-14
PB.4174.1	chr16	+	2639	13	novel_not_in_catalog	E4F1	novel	2573	14	NA	NA	6	0	intron_retention	FALSE	canonical	1	9396	junction_8	106870.01223630924	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	55	1368	15.0	-19	True	AATAAA	-15
PB.11034.2	chr8	+	2776	9	novel_in_catalog	CHMP7	novel	3403	11	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	16526	junction_7	185291.37945168786	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	77	1366	5.0	-21	True	ATTAAA	-17
PB.6700.6	chr2	+	5618	16	novel_in_catalog	PSD4	novel	910	2	NA	NA	-6	0	intron_retention	FALSE	canonical	1	147699	junction_12	70024.40846035205	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	1775	3808	25.0	-8	True	NA	NA
PB.9237.1	chr5	+	3132	4	novel_not_in_catalog	AC025470.2	novel	897	4	NA	NA	93503	1988	any annotated donor/acceptor	FALSE	canonical	1	1771	junction_1	124.93287086360507	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.3080.4	chr13	-	2700	6	full-splice_match	SLC46A3	ENST00000266943.10	3173	6	-167	640	-38	-3	multi-exon	FALSE	canonical	1	68380	junction_5	27783.783051269314	NA	3	NA	TRUE	NA	NA	NA	C	coding	461	1386	538	1923	55.0	4	True	AATAAA	-17
PB.6375.15	chr2	-	3456	20	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	3	-31	combination_of_known_junctions	FALSE	canonical	1	4377	junction_19	153379.2969498886	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	253	3105	20.0	-1	True	AGTAAA	-23
PB.270.1	chr1	+	1935	1	genic	AL513327.2	novel	NA	NA	NA	NA	-335	-11294	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11113.1	chr8	+	2267	4	full-splice_match	SMIM19	ENST00000414154.6	793	4	9	-1483	9	-730	multi-exon	FALSE	canonical	1	160516	junction_1	192258.30420961158	NA	0	NA	TRUE	NA	NA	NA	A	coding	107	324	89	412	20.0	-27	True	AATAAA	-13
PB.10846.7	chr7	-	1573	2	novel_not_in_catalog	AC016831.6	novel	1539	7	NA	NA	146599	-76096	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	1	True	NA	NA
PB.5344.7	chr17	-	5950	9	novel_in_catalog	CSNK1D	novel	401	3	NA	NA	9	-1	intron_retention	FALSE	canonical	1	649219	junction_3	300226.0269154516	NA	3	NA	TRUE	NA	NA	NA	C	coding	274	825	2931	3755	5.0	-23	False	AATAAA	-21
PB.10846.5	chr7	-	3013	5	incomplete-splice_match	AC016831.6	ENST00000643779.1	5195	7	263	63199	263	-62587	3prime_fragment	FALSE	canonical	1	24835	junction_4	46071.71129880026	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-31
PB.10846.4	chr7	-	1801	2	novel_not_in_catalog	AC016831.6	novel	1539	7	NA	NA	146679	-62492	intron_retention	FALSE	canonical	1	34587	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-1	True	AATAAA	-21
PB.7523.10	chr21	-	2168	5	full-splice_match	BRWD1	ENST00000341322.4	2495	5	-2	329	-2	-329	multi-exon	FALSE	canonical	1	86520	junction_3	39170.94731669762	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	154	516	30.0	-13	True	AATAAA	-29
PB.10846.2	chr7	-	3261	3	novel_not_in_catalog	AC016831.6	novel	1539	7	NA	NA	146681	293	intron_retention	FALSE	canonical	1	13674	junction_1	10456.5	NA	6	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	1	True	ATTAAA	-20
PB.10846.1	chr7	-	3307	4	novel_not_in_catalog	AC016831.6	novel	1539	7	NA	NA	146680	295	intron_retention	FALSE	canonical	1	8363	junction_2	10747.25428501004	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	0	True	ATTAAA	-22
PB.5344.6	chr17	-	3670	10	novel_in_catalog	CSNK1D	novel	401	3	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	31463	junction_6	384432.62365006056	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	323	931	5.0	-4	True	AATAAA	-21
PB.6338.20	chr2	-	5856	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	2	-52	combination_of_known_junctions	FALSE	canonical	1	19552	junction_19	220150.37967247187	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	58	3015	30.0	-15	True	TATAAA	-36
PB.10846.9	chr7	-	2134	3	full-splice_match	LINC-PINT	ENST00000642483.1	953	3	-168	-1013	3	1013	multi-exon	FALSE	canonical	1	8473	junction_1	50877.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-14
PB.10846.8	chr7	-	2340	2	novel_not_in_catalog	AC016831.6	novel	1539	7	NA	NA	146679	-76096	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.2400.19	chr12	+	4734	3	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	2444	-100140	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	157584.5	NA	6	1	TRUE	NA	NA	NA	B	coding	102	309	396	704	20.0	-2687	False	AATAAA	-14
PB.6338.21	chr2	-	5835	20	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	8	-52	any annotated donor/acceptor	FALSE	canonical	1	9628	junction_13	248044.10002104886	NA	24	1	TRUE	NA	NA	NA	C	coding	980	2943	52	2994	30.0	-9	True	TATAAA	-36
PB.6375.16	chr2	-	3141	19	full-splice_match	GTF3C2	ENST00000264720.7	3882	19	265	476	-2	-32	multi-exon	FALSE	canonical	1	74792	junction_18	119927.58344277115	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	56	2791	20.0	-6	True	AGTAAA	-22
PB.6380.1	chr2	-	5461	48	full-splice_match	IFT172	ENST00000260570.7	5415	48	-47	1	-15	-1	multi-exon	TRUE	canonical	1	54945	junction_33	36689.028059541524	NA	1	NA	TRUE	NA	NA	NA	A	coding	1749	5250	152	5401	25.0	5467	False	ATTAAA	-19
PB.2400.11	chr12	+	3271	6	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	35	-100140	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	255004.65329369972	NA	1	NA	TRUE	NA	NA	NA	B	coding	289	870	245	1114	20.0	0	True	AATAAA	-14
PB.2400.10	chr12	+	4522	5	full-splice_match	CCND2	ENST00000261254.7	6480	5	233	1725	233	-1725	multi-exon	FALSE	canonical	1	315169	junction_2	144837.24092127514	NA	5	NA	TRUE	NA	NA	NA	C	coding	289	870	37	906	55.0	-4888	False	AAGAAA	-13
PB.2400.13	chr12	+	4480	2	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	36	-100140	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	B	coding	29	90	361	450	20.0	1	True	AATAAA	-14
PB.2400.12	chr12	+	2027	5	full-splice_match	CCND2	ENST00000261254.7	6480	5	25	4428	25	2954	multi-exon	FALSE	canonical	1	315169	junction_2	144837.24092127514	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	245	1114	20.0	0	True	NA	NA
PB.2400.15	chr12	+	2792	5	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	38	-114555	any annotated donor/acceptor	FALSE	canonical	1	3437	junction_4	273098.03873059945	NA	3	NA	TRUE	NA	NA	NA	B	coding	251	756	242	997	30.0	3	True	TATAAA	-16
PB.2400.14	chr12	+	6495	6	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	37	-100140	any annotated donor/acceptor	FALSE	canonical	1	2786	junction_4	254021.49978960442	NA	24	NA	TRUE	NA	NA	NA	B	coding	303	912	243	1154	20.0	2	True	AATAAA	-14
PB.2400.17	chr12	+	5667	6	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	51	-100620	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	255004.65329369972	NA	64	1	TRUE	NA	NA	NA	B	coding	289	870	229	1098	20.0	-5080	False	NA	NA
PB.2400.16	chr12	+	2576	6	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	38	-103944	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	255004.65329369972	NA	1	NA	TRUE	NA	NA	NA	B	coding	289	870	242	1111	75.0	3	True	AATGAA	-32
PB.5344.1	chr17	-	4066	10	novel_in_catalog	CSNK1D	novel	401	3	NA	NA	0	13	intron_retention	TRUE	canonical	1	100918	junction_4	391377.7986035715	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	51	953	15.0	-1	True	AATAAA	-35
PB.11000.14	chr8	-	767	5	full-splice_match	ASAH1	ENST00000637561.1	929	5	40	122	0	5	multi-exon	FALSE	canonical	1	1301795	junction_2	156116.47457987897	NA	2	NA	TRUE	NA	NA	NA	C	coding	175	528	51	578	15.0	-2	True	NA	NA
PB.6338.25	chr2	-	4826	20	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	5	82	any annotated donor/acceptor	FALSE	canonical	1	1994	junction_17	249046.93989693528	NA	1	1	TRUE	NA	NA	NA	C	coding	929	2790	234	3023	40.0	-12	True	GATAAA	-23
PB.11000.11	chr8	-	1951	14	full-splice_match	ASAH1	ENST00000262097.11	2618	14	270	397	0	-4	multi-exon	FALSE	canonical	1	671509	junction_9	286297.88506034005	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	43	1230	40.0	6	True	NA	NA
PB.11921.1	chr9	+	1693	1	novel_in_catalog	SSNA1	novel	896	3	NA	NA	11	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	83	252	57	308	25.0	-5	True	AATAAA	-13
PB.9844.1	chr6	+	1559	2	novel_in_catalog	TRIM39-RPP21	novel	1698	11	NA	NA	16235	1	intron_retention	FALSE	canonical	1	955598	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	116	351	1164	1514	10.0	-14	True	AATAAA	-20
PB.11638.1	chr9	+	4207	2	full-splice_match	S1PR3	ENST00000358157.2	4206	2	-2	1	-2	-1	multi-exon	FALSE	canonical	1	99310	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	378	1137	399	1535	20.0	-23	True	AATAAA	-24
PB.8517.2	chr3	-	6877	32	full-splice_match	TNIK	ENST00000357327.9	3996	32	-342	-2539	0	-3	multi-exon	TRUE	canonical	1	54308	junction_13	32693.910546110663	NA	1	NA	TRUE	NA	NA	NA	C	coding	1331	3996	343	4338	25.0	-1	True	AATAAA	-16
PB.8517.3	chr3	-	6724	31	full-splice_match	TNIK	ENST00000470834.5	3972	31	-368	-2384	-23	-158	multi-exon	FALSE	canonical	1	88250	junction_28	26537.93342178115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1323	3972	369	4340	25.0	37	False	AATAAA	-25
PB.8517.1	chr3	-	6740	31	full-splice_match	TNIK	ENST00000470834.5	3972	31	-235	-2533	107	-9	multi-exon	FALSE	canonical	1	88250	junction_28	26537.93342178115	NA	4	NA	TRUE	NA	NA	NA	C	coding	1323	3972	236	4207	35.0	-1	True	AATAAA	-10
PB.8517.6	chr3	-	5716	31	full-splice_match	TNIK	ENST00000470834.5	3972	31	-367	-1377	-22	757	multi-exon	FALSE	canonical	1	88250	junction_28	26537.93342178115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1323	3972	368	4339	15.0	38	False	TATAAA	-25
PB.8517.7	chr3	-	5786	32	full-splice_match	TNIK	ENST00000284483.12	4059	32	-365	-1362	-20	742	multi-exon	FALSE	canonical	1	46416	junction_18	34724.59393714916	NA	0	NA	TRUE	NA	NA	NA	C	coding	1352	4059	366	4424	35.0	40	False	TATAAA	-10
PB.8517.4	chr3	-	6718	32	full-splice_match	TNIK	ENST00000357327.9	3996	32	-345	-2377	0	-165	multi-exon	FALSE	canonical	1	54308	junction_13	32693.910546110663	NA	0	NA	TRUE	NA	NA	NA	C	coding	1331	3996	346	4341	40.0	-4	True	AATAAA	-18
PB.8517.5	chr3	-	5734	32	full-splice_match	TNIK	ENST00000357327.9	3996	32	-366	-1372	-21	752	multi-exon	FALSE	canonical	1	54308	junction_13	32693.910546110663	NA	0	NA	TRUE	NA	NA	NA	C	coding	1331	3996	367	4362	25.0	39	False	TATAAA	-20
PB.2783.1	chr12	+	1940	11	novel_in_catalog	METTL25	novel	2093	12	NA	NA	10	1	no_combination_of_known_junctions	FALSE	canonical	1	6104	junction_7	20986.66114011469	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	60	1466	30.0	-22	True	AATAAA	-18
PB.2783.2	chr12	+	1990	12	full-splice_match	METTL25	ENST00000248306.7	2093	12	26	77	-5	-7	multi-exon	FALSE	canonical	1	31877	junction_1	14009.447743670864	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	44	1855	50.0	-6	True	AATAAA	-10
PB.497.8	chr1	+	4135	10	full-splice_match	PRKACB	ENST00000370685.7	4481	10	0	346	0	-342	multi-exon	FALSE	canonical	1	203406	junction_1	114489.41599602607	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	92	1288	40.0	0	True	NA	NA
PB.8976.11	chr4	+	4430	15	novel_in_catalog	PLK4	novel	3841	16	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	1	111778	junction_8	26197.565567398877	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	343	2451	25.0	23	True	AATAAA	-14
PB.8976.10	chr4	+	3618	16	novel_not_in_catalog	PLK4	novel	3841	16	NA	NA	6	3	any annotated donor/acceptor	FALSE	canonical	1	7392	junction_5	43524.453369673574	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	344	1597	25.0	22	True	AATAAA	-15
PB.1964.28	chr11	+	2222	9	novel_not_in_catalog	MS4A1	novel	495	3	NA	NA	0	275	intron_retention	FALSE	canonical	1	401	junction_2	492108.01079398143	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	630	1523	70.0	0	True	NA	NA
PB.2905.3	chr12	+	4216	5	incomplete-splice_match	SH2B3	ENST00000538307.1	2062	7	12078	-2420	12078	-1	5prime_fragment	FALSE	canonical	1	220530	junction_1	25793.129650887655	NA	0	NA	TRUE	NA	NA	NA	B	coding	277	834	63	896	30.0	-3007	False	ATTAAA	-18
PB.1650.33	chr10	+	3614	12	novel_not_in_catalog	PDCD4	novel	3697	13	NA	NA	984	0	any annotated donor/acceptor	FALSE	canonical	1	3456	junction_1	371855.2640635669	NA	2	NA	TRUE	NA	NA	NA	C	coding	469	1410	288	1697	45.0	-28	True	AATAAA	-19
PB.1650.32	chr10	+	2341	12	novel_not_in_catalog	PDCD4	novel	3697	13	NA	NA	942	29	any annotated donor/acceptor	FALSE	canonical	1	5759	junction_1	371288.12147755356	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	273	1682	20.0	10	True	AATAAA	-24
PB.1650.31	chr10	+	2073	11	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	13	31	no_combination_of_known_junctions	FALSE	canonical	1	1114	junction_1	368521.9584190337	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	561	1412	25.0	4	True	AATAAA	-26
PB.9346.9	chr5	-	3366	10	full-splice_match	FAM172A	ENST00000509163.5	1369	10	41	-2038	0	-822	multi-exon	FALSE	canonical	1	57937	junction_9	41009.42105310816	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	158	1270	25.0	-1	True	AATAAA	-18
PB.9346.8	chr5	-	3382	11	full-splice_match	FAM172A	ENST00000395965.7	4312	11	105	825	105	-825	multi-exon	FALSE	canonical	1	57867	junction_10	39746.954661835414	NA	3	NA	TRUE	NA	NA	NA	C	coding	400	1203	87	1289	30.0	104	False	AATAAA	-15
PB.9346.1	chr5	-	7274	11	full-splice_match	FAM172A	ENST00000395965.7	4312	11	-27	-2935	-14	2935	multi-exon	FALSE	canonical	1	57867	junction_10	39746.954661835414	NA	4	NA	TRUE	NA	NA	NA	C	coding	400	1203	219	1421	25.0	-28	True	ATTAAA	-13
PB.9346.3	chr5	-	4108	10	full-splice_match	FAM172A	ENST00000509163.5	1369	10	120	-2859	79	-1	multi-exon	FALSE	canonical	1	57937	junction_9	41009.42105310816	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	79	1191	20.0	0	True	AATAAA	-17
PB.9346.2	chr5	-	4578	10	full-splice_match	FAM172A	ENST00000509163.5	1369	10	-7	-3202	-7	342	multi-exon	FALSE	canonical	1	57937	junction_9	41009.42105310816	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	206	1318	20.0	-49	False	AATAAA	-16
PB.9346.5	chr5	-	4233	10	novel_in_catalog	FAM172A	novel	4312	11	NA	NA	-14	-5	combination_of_known_junctions	FALSE	canonical	1	21063	junction_7	48385.64651721509	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	319	1320	35.0	-28	True	AATAAA	-13
PB.9346.4	chr5	-	4206	11	full-splice_match	FAM172A	ENST00000395965.7	4312	11	101	5	101	-5	multi-exon	FALSE	canonical	1	57867	junction_10	39746.954661835414	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	91	1293	35.0	100	False	AATAAA	-13
PB.9346.7	chr5	-	4383	12	novel_not_in_catalog	FAM172A	novel	4312	11	NA	NA	-5	-6	any annotated donor/acceptor	FALSE	canonical	1	5234	junction_8	62934.31472785306	NA	5	1	TRUE	NA	NA	NA	C	coding	278	837	635	1471	35.0	-19	True	AATAAA	-12
PB.9346.6	chr5	-	4106	9	novel_in_catalog	FAM172A	novel	4312	11	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	1	21063	junction_7	51261.87458759556	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	192	1193	35.0	-25	True	AATAAA	-13
PB.7678.1	chr22	+	4103	6	novel_not_in_catalog	CCDC117	novel	3985	5	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	901	junction_3	109792.02577418818	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	179	748	20.0	-73	True	AATAAA	-15
PB.2905.2	chr12	+	4391	7	novel_not_in_catalog	SH2B3	novel	5406	8	NA	NA	-4814	-1	any annotated donor/acceptor	FALSE	canonical	1	180	junction_1	99329.42267973216	NA	6	1	TRUE	NA	NA	NA	B	coding	308	927	145	1071	30.0	922	False	ATTAAA	-18
PB.7678.3	chr22	+	3761	4	full-splice_match	CCDC117	ENST00000421503.6	3766	4	-2	7	-2	-1	multi-exon	FALSE	canonical	1	1611	junction_2	120795.79113068838	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	179	793	25.0	-73	True	AATAAA	-19
PB.12129.1	chrX	-	1827	7	incomplete-splice_match	AL590764.2	ENST00000647492.1	1715	13	-2	3414	-2	-3325	3prime_fragment	FALSE	canonical	1	908932	junction_2	121618.02599224343	NA	0	NA	TRUE	NA	NA	NA	B	coding	313	942	35	976	25.0	1	True	AATAAA	-21
PB.10896.1	chr7	+	5305	8	novel_in_catalog	AC073264.3	novel	1890	2	NA	NA	-31	84414	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16108.374403345837	NA	0	NA	TRUE	NA	NA	NA	B	coding	919	2760	124	2883	25.0	-62	False	NA	NA
PB.12129.3	chrX	-	1431	9	novel_not_in_catalog	AL590764.2	novel	1614	13	NA	NA	-30	-3326	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	374693.9211039459	NA	1	NA	TRUE	NA	NA	NA	B	coding	345	1038	67	1104	30.0	6858	False	AATAAA	-20
PB.12129.2	chrX	-	1475	8	full-splice_match	IL2RG	ENST00000374202.6	1534	8	54	5	-17	0	multi-exon	FALSE	canonical	1	908932	junction_3	114929.74229750725	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	39	1148	30.0	-3	True	AATAAA	-20
PB.12129.5	chrX	-	2699	3	novel_in_catalog	AL590764.2	novel	1614	13	NA	NA	0	-3326	intron_retention	FALSE	canonical	1	23713	junction_2	502590.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	100	303	447	749	30.0	-1	True	AATAAA	-20
PB.12129.4	chrX	-	3278	3	novel_in_catalog	AL590764.2	novel	1614	13	NA	NA	-2	-3326	intron_retention	FALSE	canonical	1	908932	junction_2	59980.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	113	342	809	1150	30.0	1	True	AATAAA	-20
PB.5393.1	chr18	+	2651	11	novel_not_in_catalog	NAPG	novel	1516	8	NA	NA	2	-897	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	128502.55618329156	NA	2	1	TRUE	NA	NA	NA	C	coding	229	690	319	1008	25.0	-1	True	AATAAA	-20
PB.12129.6	chrX	-	1868	7	incomplete-splice_match	IL2RG	ENST00000374202.6	1534	8	35	5	10	0	intron_retention	FALSE	canonical	1	908932	junction_3	121139.63302837763	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	564	1541	30.0	6867	False	AATAAA	-20
PB.4470.2	chr16	+	3100	2	full-splice_match	LINC00920	ENST00000499966.1	2147	2	69	-1022	69	1022	multi-exon	FALSE	canonical	1	24852	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	27	False	NA	NA
PB.4470.3	chr16	+	1382	2	full-splice_match	LINC00920	ENST00000499966.1	2147	2	154	611	154	-611	multi-exon	FALSE	canonical	1	24852	junction_1	0.0	NA	11	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	112	False	NA	NA
PB.4470.1	chr16	+	2264	2	full-splice_match	LINC00920	ENST00000499966.1	2147	2	154	-271	154	271	multi-exon	FALSE	canonical	1	24852	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	112	False	NA	NA
PB.3591.7	chr14	-	8075	12	full-splice_match	SPTLC2	ENST00000216484.6	8170	12	88	7	88	-7	multi-exon	FALSE	canonical	1	191064	junction_11	71037.92886041132	NA	3	NA	TRUE	NA	NA	NA	C	coding	562	1689	107	1795	35.0	-49	True	AATAAA	-9
PB.4470.4	chr16	+	1853	2	full-splice_match	LINC00920	ENST00000499966.1	2147	2	154	140	154	-140	multi-exon	FALSE	canonical	1	24852	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	112	False	NA	NA
PB.1376.4	chr10	-	3216	1	novel_in_catalog	ZNF37BP	novel	1695	6	NA	NA	0	-28770	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	112	339	274	612	100.0	-1	True	NA	NA
PB.8870.3	chr4	+	1471	8	full-splice_match	NUDT9	ENST00000302174.8	1701	8	229	1	2	-1	multi-exon	FALSE	canonical	1	189218	junction_1	109289.03945398875	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	96	1148	20.0	2	True	AATAAA	-21
PB.8870.1	chr4	+	2833	8	full-splice_match	NUDT9	ENST00000302174.8	1701	8	15	-1147	0	38	multi-exon	FALSE	canonical	1	189218	junction_1	109289.03945398875	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	310	1362	75.0	0	True	NA	NA
PB.1376.1	chr10	-	3821	4	incomplete-splice_match	ZNF37BP	ENST00000435805.6	1695	6	22	-985	-6	-107	intron_retention	FALSE	canonical	1	44944	junction_1	14625.326002064592	NA	0	NA	TRUE	NA	NA	NA	B	coding	115	348	2809	3156	35.0	7	True	NA	NA
PB.1376.2	chr10	-	2375	7	novel_in_catalog	ZNF37BP	novel	8637	8	NA	NA	196	-108	combination_of_known_junctions	FALSE	canonical	1	9551	junction_6	22868.17558432582	NA	0	NA	TRUE	NA	NA	NA	B	coding	115	348	1364	1711	35.0	233	False	NA	NA
PB.1376.3	chr10	-	2721	7	novel_not_in_catalog	ZNF37BP	novel	8637	8	NA	NA	0	-180	intron_retention	FALSE	canonical	1	25	junction_2	15950.043705965893	NA	6	2	TRUE	NA	NA	NA	B	coding	115	348	1782	2129	35.0	-1	True	AATGAA	-6
PB.11034.4	chr8	+	2602	10	full-splice_match	CHMP7	ENST00000313219.8	3367	10	765	0	190	0	multi-exon	FALSE	canonical	1	166918	junction_1	126121.90604782265	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	171	1202	5.0	215	False	ATTAAA	-18
PB.5000.1	chr17	+	1868	11	novel_not_in_catalog	TUBG2	novel	1761	11	NA	NA	-60	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_4	118647.9854891772	NA	33	2	TRUE	NA	NA	NA	C	coding	274	825	840	1664	15.0	-3	True	AATAAA	-24
PB.5000.2	chr17	+	1682	11	full-splice_match	TUBG2	ENST00000251412.7	1761	11	78	1	76	-1	multi-exon	FALSE	canonical	1	82110	junction_2	94592.89561933285	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	122	1477	20.0	0	True	AATAAA	-25
PB.5000.3	chr17	+	2535	4	incomplete-splice_match	TUBG2	ENST00000251412.7	1761	11	-39	4401	-39	1214	3prime_fragment	FALSE	canonical	1	82110	junction_2	79922.9919373782	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	239	784	85.0	-18	True	NA	NA
PB.5000.4	chr17	+	2367	4	incomplete-splice_match	TUBG2	ENST00000251412.7	1761	11	-33	4563	-33	1052	3prime_fragment	FALSE	canonical	1	82110	junction_2	79922.9919373782	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	233	778	70.0	-12	True	NA	NA
PB.5000.5	chr17	+	2637	3	incomplete-splice_match	TUBG2	ENST00000588870.1	1776	9	-24	4379	-22	1052	3prime_fragment	FALSE	canonical	1	82110	junction_1	97219.5	NA	23	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.5000.6	chr17	+	4031	10	novel_in_catalog	TUBG2	novel	1761	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	82110	junction_2	89649.59728249525	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	3002	3826	20.0	15	True	AATAAA	-25
PB.11426.11	chr9	+	4787	6	incomplete-splice_match	SMARCA2	ENST00000324954.10	1781	7	787	2	0	1	5prime_fragment	FALSE	canonical	1	528032	junction_1	95284.40508414796	NA	3	NA	TRUE	NA	NA	NA	C	coding	236	711	3244	3954	20.0	0	True	AATAAA	-16
PB.4796.1	chr17	-	2005	1	antisense	novelGene_MPRIP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9873.3	chr6	+	5367	22	novel_not_in_catalog	PRRC2A	novel	6861	31	NA	NA	-5	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	575923.3596382244	NA	0	NA	TRUE	NA	NA	NA	C	coding	1444	4335	860	5194	65.0	0	True	AATAAA	-7
PB.731.18	chr1	-	2466	21	full-splice_match	ARNT	ENST00000505755.5	2427	21	3	-42	3	42	multi-exon	FALSE	canonical	1	85430	junction_17	85691.6610764869	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	40	2364	20.0	130	False	AATAAA	-19
PB.9873.1	chr6	+	6836	31	full-splice_match	PRRC2A	ENST00000376007.8	6861	31	13	12	8	-12	multi-exon	FALSE	canonical	1	374303	junction_1	470228.9932422713	NA	5	NA	TRUE	NA	NA	NA	C	coding	2157	6474	190	6663	65.0	-9071	False	AATAAA	-7
PB.6878.4	chr2	-	2866	20	full-splice_match	CWC22	ENST00000404136.2	2392	20	5	-479	5	-266	multi-exon	FALSE	canonical	1	117877	junction_19	58742.379418295546	NA	1	NA	TRUE	NA	NA	NA	C	coding	904	2712	153	2864	65.0	-3	True	AAGAAA	-33
PB.6878.5	chr2	-	2620	20	full-splice_match	CWC22	ENST00000404136.2	2392	20	-6	-222	-6	222	multi-exon	FALSE	canonical	1	117877	junction_19	58742.379418295546	NA	1	NA	TRUE	NA	NA	NA	C	coding	819	2457	164	2620	60.0	-14	True	AAGAAA	-36
PB.6878.6	chr2	-	2378	20	full-splice_match	CWC22	ENST00000404136.2	2392	20	5	9	5	-9	multi-exon	FALSE	canonical	1	117877	junction_19	58742.379418295546	NA	3	NA	TRUE	NA	NA	NA	C	coding	742	2226	153	2378	75.0	-3	True	AGTAAA	-43
PB.10448.6	chr7	+	2552	6	novel_in_catalog	CBX3	novel	2128	6	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	1	68506	junction_1	499960.4936646094	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	855	1406	25.0	3	True	AATAAA	-22
PB.6878.1	chr2	-	3984	20	full-splice_match	CWC22	ENST00000404136.2	2392	20	-5	-1587	-5	842	multi-exon	TRUE	canonical	1	117877	junction_19	58742.379418295546	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	163	2889	35.0	-13	True	AATAAA	-9
PB.6878.2	chr2	-	3765	20	full-splice_match	CWC22	ENST00000404136.2	2392	20	4	-1377	4	632	multi-exon	FALSE	canonical	1	117877	junction_19	58742.379418295546	NA	1	NA	TRUE	NA	NA	NA	C	coding	908	2727	154	2880	35.0	-4	True	AATAAA	-21
PB.6878.3	chr2	-	3137	20	full-splice_match	CWC22	ENST00000404136.2	2392	20	-1	-744	-1	-1	multi-exon	FALSE	canonical	1	117877	junction_19	58742.379418295546	NA	1	NA	TRUE	NA	NA	NA	C	coding	908	2727	159	2885	20.0	-9	True	AATAAA	-15
PB.10201.2	chr6	+	2535	5	full-splice_match	HINT3	ENST00000229633.6	3314	5	125	654	125	-654	multi-exon	FALSE	canonical	1	188039	junction_4	41793.21225016689	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	73	621	65.0	-11	False	NA	NA
PB.10201.3	chr6	+	2730	5	full-splice_match	HINT3	ENST00000229633.6	3314	5	93	491	93	-491	multi-exon	FALSE	canonical	1	188039	junction_4	41793.21225016689	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	105	653	80.0	-4	True	NA	NA
PB.10201.1	chr6	+	3236	5	full-splice_match	HINT3	ENST00000229633.6	3314	5	76	2	76	-2	multi-exon	FALSE	canonical	1	188039	junction_4	41793.21225016689	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	122	670	15.0	-60	False	AATAAA	-19
PB.11686.8	chr9	-	2442	11	incomplete-splice_match	ERP44	ENST00000262455.6	4854	12	-6	4671	-6	-4671	3prime_fragment	FALSE	canonical	1	265729	junction_1	234248.47429138146	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	207	1352	40.0	-47	False	NA	NA
PB.8537.1	chr3	+	2750	21	full-splice_match	USP13	ENST00000263966.7	8323	21	318	5255	23	-260	multi-exon	FALSE	canonical	1	66752	junction_1	31200.53678107959	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	154	2745	60.0	33	True	NA	NA
PB.10380.1	chr7	+	3559	1	novel_in_catalog	RBAK-RBAKDN	novel	1001	8	NA	NA	20015	-3737	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-6419	False	AATAAA	-32
PB.11625.34	chr9	-	2665	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	2	-156	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	220	1611	55.0	-16	True	AATATA	-33
PB.2905.7	chr12	+	2724	1	incomplete-splice_match	SH2B3	ENST00000341259.6	5406	8	42951	1	14037	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	103	312	522	833	30.0	-1048	False	ATTAAA	-18
PB.9402.7	chr5	-	1800	6	full-splice_match	ATG12	ENST00000513167.1	732	6	-44	-1024	-23	-23	multi-exon	FALSE	canonical	1	5652	junction_4	28467.636225018752	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	250	False	NA	NA
PB.11686.7	chr9	-	1459	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	40	3355	40	-3355	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	161	1381	25.0	-1	True	AGTAAA	-14
PB.1029.2	chr1	+	3332	5	incomplete-splice_match	INAVA	ENST00000413687.2	2197	10	13003	-2006	-671	-1	5prime_fragment	FALSE	canonical	1	17686	junction_4	39007.399172304475	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	1	1227	20.0	1	True	AATAAA	-22
PB.1029.1	chr1	+	4108	10	full-splice_match	INAVA	ENST00000367342.8	4298	10	190	0	190	0	multi-exon	TRUE	canonical	1	17686	junction_9	35454.29821650249	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	11	2002	20.0	-10	True	AATAAA	-23
PB.8896.2	chr4	-	1805	2	full-splice_match	H2AFZ	ENST00000511348.1	1843	2	33	5	-23	-3	multi-exon	FALSE	canonical	1	6809515	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-8	True	AATAAA	-12
PB.11093.11	chr8	-	2436	4	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	3	151	intron_retention	FALSE	canonical	1	179608	junction_1	72047.5342457248	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	1685	2158	80.0	-14	True	NA	NA
PB.2292.1	chr11	-	2861	6	incomplete-splice_match	CADM1	ENST00000452722.7	8588	10	275219	5069	-11052	2	5prime_fragment	FALSE	canonical	1	134117	junction_2	74293.9416065671	NA	2	NA	TRUE	NA	NA	NA	A	coding	194	585	108	692	85.0	-32	False	NA	NA
PB.1390.1	chr10	+	1729	2	full-splice_match	ZNF22	ENST00000298299.3	2551	2	437	385	437	-385	multi-exon	FALSE	canonical	1	283256	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	157	831	40.0	-11	True	AATAAA	-15
PB.1390.2	chr10	+	2098	2	full-splice_match	ZNF22	ENST00000298299.3	2551	2	451	2	451	-2	multi-exon	FALSE	canonical	1	283256	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	143	817	15.0	3	True	AATAAA	-21
PB.11171.2	chr8	+	2164	17	novel_in_catalog	CSPP1	novel	567	6	NA	NA	-5	-535	combination_of_known_junctions	FALSE	canonical	1	12915	junction_15	39307.13841657772	NA	0	NA	TRUE	NA	NA	NA	B	coding	709	2127	37	2163	65.0	-29	True	AAGAAA	-41
PB.10127.5	chr6	-	7416	42	full-splice_match	ASCC3	ENST00000369162.6	8146	42	192	538	129	486	multi-exon	FALSE	canonical	1	125717	junction_31	60360.230463169406	NA	0	NA	TRUE	NA	NA	NA	C	coding	2202	6609	154	6762	25.0	156	False	AATAAA	-22
PB.9896.1	chr6	+	922	5	novel_not_in_catalog	RNF5	novel	1168	6	NA	NA	156	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	68608.58069285139	NA	4	1	TRUE	NA	NA	NA	A	coding	151	456	1	456	20.0	-2069	False	AATAAA	-14
PB.10127.6	chr6	-	7516	42	novel_not_in_catalog	ASCC3	novel	8146	42	NA	NA	-18	483	any annotated donor/acceptor	FALSE	canonical	1	6435	junction_3	71024.9119890043	NA	1	NA	TRUE	NA	NA	NA	C	coding	2045	6138	372	6509	35.0	-62	True	AATAAA	-19
PB.10127.1	chr6	-	8129	42	full-splice_match	ASCC3	ENST00000369162.6	8146	42	-7	24	1	-24	multi-exon	FALSE	canonical	1	125717	junction_31	60360.230463169406	NA	0	NA	TRUE	NA	NA	NA	C	coding	2202	6609	353	6961	80.0	-43	True	NA	NA
PB.11271.1	chr8	+	3972	4	intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5314	junction_1	1386.2720592373714	NA	2	NA	FALSE	NA	NA	NA	A	coding	127	384	3040	3423	90.0	4	True	NA	NA
PB.1893.21	chr11	+	2818	7	novel_not_in_catalog	CD44	novel	4589	9	NA	NA	3	773	intron_retention	FALSE	canonical	1	8081	junction_6	1337799.4108649723	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	131	1195	35.0	3	True	AATAAA	-15
PB.1893.20	chr11	+	4409	10	novel_in_catalog	CD44	novel	4589	9	NA	NA	3	-5	no_combination_of_known_junctions	FALSE	canonical	1	6677	junction_6	1284131.1878867487	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	131	1345	40.0	3	True	ATTAAA	-27
PB.11358.6	chr8	+	5335	22	novel_in_catalog	DENND3	novel	560	4	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	6815	junction_1	76462.39848567011	NA	2	NA	TRUE	NA	NA	NA	C	coding	777	2334	1439	3772	35.0	0	True	AATAAA	-9
PB.11358.7	chr8	+	3937	23	full-splice_match	DENND3	ENST00000519811.5	5482	23	-8	1553	-8	1185	multi-exon	FALSE	canonical	1	95951	junction_4	58227.55295355179	NA	0	NA	TRUE	NA	NA	NA	C	coding	1278	3837	79	3915	15.0	3	True	AATAAA	-22
PB.11278.5	chr8	-	3057	2	full-splice_match	ZNF706	ENST00000519916.1	597	2	-174	-2286	1	-1	multi-exon	FALSE	canonical	1	103246	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	62	189	250	438	40.0	-9	True	AATAAA	-24
PB.11358.5	chr8	+	5432	23	full-splice_match	DENND3	ENST00000519811.5	5482	23	38	12	1	0	multi-exon	FALSE	canonical	1	95951	junction_4	58227.55295355179	NA	2	NA	TRUE	NA	NA	NA	C	coding	1278	3837	33	3869	35.0	-28	False	AATAAA	-9
PB.11358.2	chr8	+	3743	21	novel_in_catalog	DENND3	novel	560	4	NA	NA	-22	1185	combination_of_known_junctions	FALSE	canonical	1	22140	junction_3	64984.64932382109	NA	1	NA	TRUE	NA	NA	NA	C	coding	1200	3603	119	3721	15.0	1	True	AATAAA	-22
PB.11358.3	chr8	+	5360	22	full-splice_match	DENND3	ENST00000518668.5	5185	22	-186	11	-19	1	multi-exon	FALSE	canonical	1	9780	junction_8	68663.36378203405	NA	3	NA	TRUE	NA	NA	NA	C	coding	1226	3681	116	3796	30.0	4	True	AATAAA	-10
PB.11358.1	chr8	+	3873	22	novel_in_catalog	DENND3	novel	560	4	NA	NA	-23	1177	combination_of_known_junctions	TRUE	canonical	1	16534	junction_9	68569.66857050195	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	1526	3859	20.0	0	True	AATAAA	-14
PB.11625.36	chr9	-	2732	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-14	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	2	1	TRUE	NA	NA	NA	B	coding	458	1377	236	1612	85.0	-32	True	NA	NA
PB.6813.1	chr2	-	4678	13	novel_in_catalog	COBLL1	novel	472	3	NA	NA	39	-4	combination_of_known_junctions	FALSE	canonical	1	48043	junction_3	50760.50380045877	NA	0	NA	TRUE	NA	NA	NA	A	coding	1127	3384	178	3561	35.0	28	True	ATTAAA	-13
PB.11358.8	chr8	+	4874	23	full-splice_match	DENND3	ENST00000519811.5	5482	23	-6	614	-6	-317	multi-exon	FALSE	canonical	1	95951	junction_4	58227.55295355179	NA	0	NA	TRUE	NA	NA	NA	C	coding	1278	3837	77	3913	20.0	5	True	CATAAA	-23
PB.11358.9	chr8	+	3418	14	incomplete-splice_match	DENND3	ENST00000519811.5	5482	23	-6	19542	-6	0	3prime_fragment	FALSE	canonical	1	95951	junction_4	51613.76616836675	NA	4	NA	TRUE	NA	NA	NA	C	coding	898	2697	77	2773	90.0	5	True	NA	NA
PB.6805.12	chr2	+	3239	5	incomplete-splice_match	TANK	ENST00000406287.5	875	8	67	27924	10	2478	3prime_fragment	FALSE	canonical	1	32704	junction_2	267255.49673053966	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	75	608	10.0	-12	True	AATAAA	-22
PB.3151.7	chr13	-	3700	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	29	1	any annotated donor/acceptor	FALSE	canonical	1	714	junction_11	1327679.4893530814	NA	2	1	TRUE	NA	NA	NA	C	coding	366	1101	928	2028	10.0	-1	True	AATAAA	-17
PB.3151.6	chr13	-	2316	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	22	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1071904.3256549225	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	97	1980	10.0	-8	True	AATAAA	-18
PB.3151.1	chr13	-	3576	16	full-splice_match	LCP1	ENST00000323076.6	3787	16	156	55	36	-55	multi-exon	FALSE	canonical	1	1963481	junction_15	685358.7765944167	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	83	1966	75.0	6	True	AAGAAA	-16
PB.3151.2	chr13	-	3803	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	43	2	any annotated donor/acceptor	TRUE	canonical	1	1174	junction_16	1300531.49644525	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	247	2130	10.0	13	True	AATAAA	-18
PB.3151.9	chr13	-	3784	18	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	34	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	1460998.5862857886	NA	1	1	TRUE	NA	NA	NA	C	coding	627	1884	231	2114	15.0	4	True	AATAAA	-15
PB.3151.8	chr13	-	3703	16	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	49	junction_15	1051652.3623695045	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	148	2031	10.0	455	False	AATAAA	-17
PB.6805.11	chr2	+	3799	1	novel_in_catalog	TANK	novel	2152	8	NA	NA	3	689	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	AATAAA	-17
PB.11582.3	chr9	-	5200	1	intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.3872.5	chr15	+	3865	6	full-splice_match	MAPK6	ENST00000261845.6	5345	6	20	1460	-17	-1460	multi-exon	FALSE	canonical	1	166374	junction_1	43925.7767767401	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	788	2953	60.0	-8	True	NA	NA
PB.2453.2	chr12	+	3516	15	novel_in_catalog	PHC1	novel	618	6	NA	NA	-16	-103	intron_retention	FALSE	canonical	1	53	junction_11	5943.735495271901	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	197	2674	15.0	-334	False	ATTAAA	-34
PB.1035.8	chr1	+	4036	24	novel_not_in_catalog	IPO9	novel	11435	24	NA	NA	8	587	any annotated donor/acceptor	FALSE	canonical	1	5004	junction_1	160709.9036064155	NA	1	NA	TRUE	NA	NA	NA	C	coding	890	2673	458	3130	35.0	-46	True	AGTAAA	-17
PB.1035.9	chr1	+	3829	24	novel_not_in_catalog	IPO9	novel	11435	24	NA	NA	9	381	any annotated donor/acceptor	FALSE	canonical	1	5004	junction_1	160709.9036064155	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	457	3129	75.0	-45	True	NA	NA
PB.8773.20	chr4	+	3298	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	112	902	-22	-900	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	69	947	20.0	22	True	AATAAA	-16
PB.1035.4	chr1	+	3334	24	full-splice_match	IPO9	ENST00000361565.8	11435	24	175	7926	167	-5	multi-exon	FALSE	canonical	1	291621	junction_1	124988.49038506403	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	348	3020	30.0	113	False	NA	NA
PB.1035.5	chr1	+	3876	24	novel_not_in_catalog	IPO9	novel	11435	24	NA	NA	0	381	any annotated donor/acceptor	FALSE	canonical	1	11577	junction_1	159740.65457873853	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	504	3176	75.0	-62	False	NA	NA
PB.1035.6	chr1	+	4071	24	full-splice_match	IPO9	ENST00000361565.8	11435	24	29	7335	21	586	multi-exon	FALSE	canonical	1	291621	junction_1	124988.49038506403	NA	1	NA	TRUE	NA	NA	NA	C	coding	1041	3126	41	3166	30.0	-33	True	AGTAAA	-16
PB.1035.7	chr1	+	3725	24	full-splice_match	IPO9	ENST00000361565.8	11435	24	4	7706	-4	215	multi-exon	FALSE	canonical	1	291621	junction_1	124988.49038506403	NA	1	NA	TRUE	NA	NA	NA	C	coding	1041	3126	66	3191	10.0	-58	False	NA	NA
PB.8773.23	chr4	+	2043	10	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	-21	511	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	119868.36809054905	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	67	822	15.0	367	False	AATAAA	-16
PB.1035.2	chr1	+	4223	25	novel_in_catalog	IPO9	novel	11435	24	NA	NA	-11	587	combination_of_known_junctions	FALSE	canonical	1	44700	junction_1	181579.73178239062	NA	1	NA	TRUE	NA	NA	NA	C	coding	890	2673	645	3317	35.0	-73	False	AGTAAA	-17
PB.1035.3	chr1	+	4009	25	novel_in_catalog	IPO9	novel	11435	24	NA	NA	-6	378	combination_of_known_junctions	FALSE	canonical	1	44700	junction_1	181579.73178239062	NA	1	NA	TRUE	NA	NA	NA	C	coding	890	2673	640	3312	80.0	-68	False	NA	NA
PB.3084.1	chr13	-	2392	1	incomplete-splice_match	KATNAL1	ENST00000380615.7	7551	11	102461	2	5641	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	NA	False	AATAAA	-20
PB.7937.1	chr3	+	2282	18	novel_in_catalog	ATG7	novel	972	8	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	7776	junction_11	63829.03907831372	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	91	2043	15.0	-2070	False	NA	NA
PB.8773.25	chr4	+	2122	11	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	4	511	any annotated donor/acceptor	FALSE	canonical	1	4946	junction_1	103273.03516910889	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	203	901	15.0	392	False	AATAAA	-16
PB.8390.1	chr3	+	1554	7	full-splice_match	HMCES	ENST00000383463.8	2515	7	5	956	-1	-32	multi-exon	FALSE	canonical	1	245982	junction_1	140057.31976279887	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	85	1149	75.0	-27	True	NA	NA
PB.11582.2	chr9	-	3011	1	intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.294.3	chr1	+	3440	4	novel_not_in_catalog	ZC3H12A	novel	2684	6	NA	NA	0	-7	intron_retention	FALSE	canonical	1	59628	junction_1	77564.66631570504	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	86	928	20.0	0	True	AATAAA	-21
PB.9806.1	chr6	-	2027	6	novel_in_catalog	GUSBP2	novel	1203	9	NA	NA	-363	-21	no_combination_of_known_junctions	FALSE	canonical	1	2898	junction_2	15049.509219904816	NA	0	NA	TRUE	NA	NA	NA	A	coding	140	423	637	1059	100.0	-736	False	NA	NA
PB.9368.32	chr5	+	3621	23	full-splice_match	PAM	ENST00000346918.6	3302	23	152	-471	66	2	multi-exon	FALSE	canonical	1	28962	junction_22	231970.16461765897	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	308	2971	20.0	6	True	AATAAA	-17
PB.3952.8	chr15	+	3013	21	novel_in_catalog	KIF23	novel	3723	23	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	1	7566	junction_16	141585.24323900248	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	145	2403	40.0	-27	True	ATTAAA	-13
PB.5028.1	chr17	+	1460	3	antisense	novelGene_AC007993.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1375	junction_1	625.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.9707.8	chr6	+	3151	15	full-splice_match	PRPF4B	ENST00000337659.10	4415	15	72	1192	72	-1192	multi-exon	FALSE	canonical	1	161868	junction_14	121393.04548005815	NA	2	NA	TRUE	NA	NA	NA	C	coding	1007	3024	29	3052	45.0	-17	True	TATAAA	-21
PB.9707.9	chr6	+	5037	18	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	75	0	intron_retention	FALSE	canonical	1	106090	junction_17	130579.50360021096	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	26	3049	10.0	-14	True	AATAAA	-18
PB.3952.2	chr15	+	3847	23	novel_in_catalog	KIF23	novel	3723	23	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	5996	junction_9	140372.65359639755	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	1507	3237	40.0	-38	True	ATTAAA	-13
PB.3952.3	chr15	+	1823	15	incomplete-splice_match	KIF23	ENST00000395392.6	3357	23	33	9757	1	15	3prime_fragment	FALSE	canonical	1	138411	junction_7	91106.66602364439	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1683	141	1823	65.0	-23	True	AATAGA	-8
PB.9707.6	chr6	+	4109	19	novel_in_catalog	PRPF4B	novel	6775	16	NA	NA	35	0	intron_retention	FALSE	canonical	1	8916	junction_15	146020.33408827006	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	66	3089	10.0	-54	True	AATAAA	-18
PB.3952.1	chr15	+	1879	16	incomplete-splice_match	KIF23	ENST00000559279.6	3129	22	-68	10042	-2	-6	3prime_fragment	FALSE	canonical	1	89010	junction_7	104459.74295724326	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1704	176	1879	50.0	7	True	ACTAAA	-29
PB.3952.6	chr15	+	3887	24	novel_in_catalog	KIF23	novel	3723	23	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	5996	junction_10	145800.91171499062	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	1547	3277	40.0	-36	True	ATTAAA	-13
PB.3952.7	chr15	+	3217	22	full-splice_match	KIF23	ENST00000352331.8	3351	22	30	104	9	-75	multi-exon	FALSE	canonical	1	138411	junction_7	111261.08050784536	NA	4	NA	TRUE	NA	NA	NA	C	coding	856	2571	133	2703	50.0	-15	True	AATAAA	-18
PB.3952.4	chr15	+	3280	23	novel_in_catalog	KIF23	novel	3723	23	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	1	89010	junction_7	122050.3498980971	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	58	2670	40.0	0	True	ATTAAA	-13
PB.3952.5	chr15	+	3253	21	novel_in_catalog	KIF23	novel	3723	23	NA	NA	8	1	no_combination_of_known_junctions	FALSE	canonical	1	20400	junction_19	122226.53574936172	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	155	2578	40.0	-37	True	ATTAAA	-13
PB.23.1	chr1	-	1295	5	full-splice_match	SSU72	ENST00000291386.3	1290	5	-6	1	-6	0	multi-exon	FALSE	canonical	1	1447954	junction_4	545823.3002055244	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	319	903	15.0	-13	True	AATAAA	-15
PB.3155.7	chr13	-	1489	11	full-splice_match	SUCLA2	ENST00000378654.8	2192	11	-11	714	-11	-9	multi-exon	FALSE	canonical	1	88067	junction_5	177362.31078851	NA	4	NA	TRUE	NA	NA	NA	C	coding	463	1392	97	1488	30.0	-49	False	NA	NA
PB.3155.6	chr13	-	1736	11	full-splice_match	SUCLA2	ENST00000646932.1	2111	11	-15	390	3	-265	multi-exon	FALSE	canonical	1	88067	junction_5	177362.31078851	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	20	1411	50.0	-16	True	TATAAA	-7
PB.3829.1	chr15	+	3940	10	novel_not_in_catalog	CASC4	novel	742	6	NA	NA	-18	0	intron_retention	TRUE	canonical	1	403	junction_8	172616.1659752643	NA	3	1	TRUE	NA	NA	NA	C	coding	360	1083	320	1402	10.0	-18	True	AATAAA	-17
PB.10898.7	chr7	-	4101	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	5	728	no_combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	111937.9830764981	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	171	2936	65.0	4	True	NA	NA
PB.3829.3	chr15	+	3913	11	novel_not_in_catalog	CASC4	novel	742	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	165510.76309367316	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	252	1562	10.0	0	True	AATAAA	-17
PB.3829.2	chr15	+	3777	10	full-splice_match	CASC4	ENST00000299957.10	3962	10	188	-3	159	3	multi-exon	FALSE	canonical	1	166818	junction_5	140808.20679137445	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	112	1422	20.0	1	True	AATAAA	-21
PB.3829.5	chr15	+	3662	11	novel_not_in_catalog	CASC4	novel	742	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	165510.76309367316	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	358	1311	10.0	0	True	AATAAA	-17
PB.3829.4	chr15	+	3745	10	novel_not_in_catalog	CASC4	novel	742	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	170385.18269200422	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	252	1394	10.0	0	True	AATAAA	-17
PB.3829.7	chr15	+	3610	9	full-splice_match	CASC4	ENST00000345795.6	3764	9	154	0	154	0	multi-exon	FALSE	canonical	1	166818	junction_5	142719.5752375966	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	117	1259	10.0	-4	True	AATAAA	-17
PB.3829.6	chr15	+	2887	11	novel_in_catalog	CASC4	novel	742	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1822	junction_10	165188.6254050502	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	302	1612	10.0	0	True	AATAAA	-18
PB.3829.9	chr15	+	2717	10	novel_not_in_catalog	CASC4	novel	742	6	NA	NA	0	-2	intron_retention	FALSE	canonical	1	778	junction_9	170235.29962182735	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	298	1440	10.0	4	True	AATAAA	-15
PB.3829.8	chr15	+	4106	11	novel_in_catalog	CASC4	novel	742	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	955	junction_1	181357.72469649592	NA	2	NA	TRUE	NA	NA	NA	C	coding	317	954	802	1755	10.0	4	True	AATAAA	-17
PB.3166.4	chr13	+	2461	9	novel_in_catalog	PHF11	novel	990	5	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	120936	junction_1	87109.2633732917	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	50	598	25.0	-17	True	AATAAA	-18
PB.3166.3	chr13	+	4100	9	novel_in_catalog	PHF11	novel	990	5	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	120936	junction_1	87437.78245335008	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	54	533	30.0	-21	True	AATAAA	-13
PB.3166.2	chr13	+	5203	8	novel_not_in_catalog	PHF11	novel	990	5	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	3689	junction_1	126479.44552005762	NA	4	NA	TRUE	NA	NA	NA	C	coding	120	363	161	523	20.0	-22	True	AATAAA	-24
PB.3166.1	chr13	+	1440	10	full-splice_match	PHF11	ENST00000378319.7	1359	10	-89	8	-89	-2	multi-exon	FALSE	canonical	1	120936	junction_1	82460.01560621837	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	131	1126	25.0	-5159	False	AATAAA	-18
PB.10898.9	chr7	-	4268	10	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	-21	724	no_combination_of_known_junctions	FALSE	canonical	1	872	junction_9	106924.62632719311	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	342	3107	75.0	-1	True	NA	NA
PB.3968.1	chr15	-	1999	7	full-splice_match	STOML1	ENST00000541638.5	6336	7	41	4296	-10	-1	multi-exon	FALSE	canonical	1	69029	junction_6	37170.02734918134	NA	0	NA	TRUE	NA	NA	NA	A	coding	398	1197	85	1281	55.0	-13	True	AATAAA	-19
PB.9717.1	chr6	+	4874	10	incomplete-splice_match	RREB1	ENST00000334984.10	5789	12	-240	17593	-8	1986	3prime_fragment	FALSE	canonical	1	89969	junction_1	33657.04929006078	NA	1	NA	TRUE	NA	NA	NA	B	coding	1391	4176	555	4730	5.0	3	True	NA	NA
PB.10469.1	chr7	-	1162	4	full-splice_match	GGCT	ENST00000275428.8	1173	4	15	-4	0	4	multi-exon	FALSE	canonical	1	550624	junction_3	15316.607029263658	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	121	687	25.0	-1	True	AATAAA	-21
PB.8260.26	chr3	-	4117	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	-48	17	no_combination_of_known_junctions	FALSE	canonical	1	15297	junction_14	224176.9295024989	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	412	2511	35.0	269	False	AATAAA	-29
PB.8260.27	chr3	-	3797	16	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-6	17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	221407.01993959752	NA	2	NA	TRUE	NA	NA	NA	C	coding	669	2010	182	2191	35.0	-1	True	AATAAA	-29
PB.5320.9	chr17	-	3220	9	novel_not_in_catalog	FAAP100	novel	3822	9	NA	NA	-16	-8	any annotated donor/acceptor	FALSE	canonical	1	14045	junction_4	107758.10527976249	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	64	2295	15.0	-6	True	NA	NA
PB.5320.8	chr17	-	2375	6	novel_not_in_catalog	FAAP100	novel	3822	9	NA	NA	22	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	90508.8013015309	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	674	2326	15.0	-2	True	NA	NA
PB.11284.2	chr8	-	4138	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	138	-1419	-20	-47	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	629	1975	25.0	8374	False	AGTAAA	-16
PB.11284.3	chr8	-	4251	12	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-48	combination_of_known_junctions	FALSE	canonical	1	43126	junction_7	433538.8151221343	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	1244	2089	20.0	-2	True	AGTAAA	-15
PB.4312.1	chr16	+	4743	7	full-splice_match	UBFD1	ENST00000395878.7	5110	7	365	2	0	0	multi-exon	FALSE	canonical	1	130700	junction_1	78216.06581557696	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	17	946	10.0	0	True	ATTAAA	-12
PB.10135.1	chr6	-	3115	2	antisense	novelGene_CRYBG1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	854	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	290	873	1065	1937	35.0	1	True	AATAAA	-11
PB.4312.3	chr16	+	4582	6	incomplete-splice_match	UBFD1	ENST00000567212.5	4727	7	356	-7	310	5	5prime_fragment	FALSE	canonical	1	146327	junction_2	75214.39266682939	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	218	778	10.0	350	False	ATTAAA	-19
PB.4312.2	chr16	+	4664	6	novel_in_catalog	UBFD1	novel	5110	7	NA	NA	3	1	no_combination_of_known_junctions	FALSE	canonical	1	17094	junction_5	108444.49841757763	NA	4	NA	TRUE	NA	NA	NA	C	coding	295	888	20	907	5.0	-3	True	ATTAAA	-13
PB.5320.1	chr17	-	3844	9	full-splice_match	FAAP100	ENST00000443656.6	3822	9	-23	1	-22	0	multi-exon	FALSE	canonical	1	87794	junction_7	84921.07462226323	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	719	2911	5.0	-12	True	NA	NA
PB.11284.9	chr8	-	3419	10	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	459318.0259721881	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	591	1481	10.0	-1	True	GATAAA	-16
PB.5320.3	chr17	-	3819	9	novel_not_in_catalog	FAAP100	novel	3822	9	NA	NA	-29	-7	any annotated donor/acceptor	FALSE	canonical	1	7949	junction_7	102876.51216803267	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	701	2893	15.0	-19	True	NA	NA
PB.5320.2	chr17	-	4269	10	novel_not_in_catalog	FAAP100	novel	3822	9	NA	NA	-6	-7	any annotated donor/acceptor	FALSE	canonical	1	2053	junction_9	104164.49415239673	NA	8	NA	TRUE	NA	NA	NA	C	coding	881	2646	698	3343	15.0	-4	True	NA	NA
PB.5320.5	chr17	-	3432	9	novel_not_in_catalog	FAAP100	novel	3822	9	NA	NA	-31	-7	any annotated donor/acceptor	FALSE	canonical	1	14045	junction_4	109456.66048115802	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	728	2506	15.0	-21	True	NA	NA
PB.11349.2	chr8	-	4524	16	novel_in_catalog	ZFAT	novel	4273	14	NA	NA	-24	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	64118.016007636696	NA	1	NA	TRUE	NA	NA	NA	C	coding	1168	3507	211	3717	15.0	70	False	AATAAA	-16
PB.5320.6	chr17	-	3341	8	novel_in_catalog	FAAP100	novel	3822	9	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	1	4086	junction_7	106332.44795278934	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	223	2415	15.0	-3	True	NA	NA
PB.6984.34	chr2	-	3140	1	novel_in_catalog	IKZF2	novel	9350	8	NA	NA	-6853	-11632	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	114	345	1047	1391	80.0	288	False	NA	NA
PB.11903.3	chr9	-	3421	10	novel_not_in_catalog	INPP5E	novel	3394	10	NA	NA	-34	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	66761.64265634003	NA	5	1	TRUE	NA	NA	NA	C	coding	569	1710	439	2148	35.0	7368	False	AATAAA	-18
PB.8524.17	chr3	+	3933	23	novel_in_catalog	ECT2	novel	4087	24	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	4297	junction_5	110413.57005429312	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	155	2698	20.0	0	True	AATAAA	-18
PB.10802.14	chr7	+	2936	16	novel_in_catalog	ST7	novel	2114	14	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	1	25303	junction_1	102297.76844582464	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	391	2019	60.0	0	True	NA	NA
PB.6085.8	chr19	-	2628	22	novel_not_in_catalog	EML2	novel	2364	19	NA	NA	96	0	any annotated donor/acceptor	FALSE	canonical	1	7929	junction_8	140734.67848736967	NA	1	1	TRUE	NA	NA	NA	C	coding	388	1167	431	1597	20.0	-7	True	AATAAA	-13
PB.5364.3	chr18	+	2100	17	full-splice_match	NDC80	ENST00000261597.8	2172	17	71	1	17	-1	multi-exon	FALSE	canonical	1	201319	junction_7	43524.489096477344	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	112	2040	10.0	-14	True	AATAAA	-19
PB.2489.4	chr12	-	3792	21	full-splice_match	EPS8	ENST00000644374.1	3873	21	-3	84	-3	-12	multi-exon	FALSE	canonical	1	176036	junction_20	57333.91663952063	NA	1	NA	TRUE	NA	NA	NA	C	coding	822	2469	253	2721	30.0	-4	True	CATAAA	-16
PB.2489.5	chr12	-	3686	21	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-4529	-2	any annotated donor/acceptor	FALSE	canonical	1	3654	junction_20	83765.12005750067	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	32	2533	30.0	-1	True	AATAAA	-19
PB.2489.6	chr12	-	3746	22	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-4529	-2	any annotated donor/acceptor	FALSE	canonical	1	965	junction_21	102406.45610952252	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	65	2593	30.0	-1	True	AATAAA	-19
PB.5364.2	chr18	+	1534	13	incomplete-splice_match	NDC80	ENST00000261597.8	2172	17	53	15209	-1	-13888	3prime_fragment	FALSE	canonical	1	201319	junction_7	44714.91575029025	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1404	130	1533	60.0	1	True	AATGAA	-5
PB.11861.24	chr9	+	3095	7	novel_not_in_catalog	PRRC2B	novel	9157	31	NA	NA	1064	-2042	any annotated donor/acceptor	FALSE	canonical	1	57933	junction_2	323185.7845480161	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	230	748	80.0	NA	False	NA	NA
PB.2489.1	chr12	-	3839	22	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-5031	18	any annotated donor/acceptor	FALSE	canonical	1	198	junction_21	102508.94133586813	NA	2	NA	TRUE	NA	NA	NA	C	coding	842	2529	134	2662	40.0	-1	True	AATAAA	-43
PB.2489.2	chr12	-	3980	22	full-splice_match	EPS8	ENST00000645775.1	3904	22	-27	-49	-15	16	multi-exon	FALSE	canonical	1	9714	junction_21	101248.73581126178	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	277	2805	40.0	-1	True	AATAAA	-41
PB.10594.1	chr7	-	6593	19	full-splice_match	BAZ1B	ENST00000404251.1	5428	19	-15	-1150	-15	-17	multi-exon	FALSE	canonical	1	274354	junction_18	128595.49111179578	NA	0	NA	TRUE	NA	NA	NA	C	coding	1483	4452	361	4812	40.0	-1	True	AATAAA	-39
PB.9667.29	chr5	+	2091	15	full-splice_match	CANX	ENST00000247461.8	4260	15	71	2098	0	-80	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	130	1908	30.0	-5	True	AGTAAA	-13
PB.2489.9	chr12	-	3713	19	novel_in_catalog	EPS8	novel	3722	20	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	1619	junction_18	88269.37517258195	NA	1	NA	TRUE	NA	NA	NA	C	coding	742	2229	333	2561	25.0	-1	True	AATAAA	-18
PB.8771.8	chr4	+	1412	9	full-splice_match	OCIAD1	ENST00000381473.7	1594	9	228	-46	6	0	multi-exon	FALSE	canonical	1	302762	junction_1	469590.8709736061	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	191	928	20.0	-35	True	AATAAA	-17
PB.9667.26	chr5	+	4153	16	novel_not_in_catalog	CANX	novel	585	5	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	1611147.7541486118	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	150	1928	15.0	-25	True	ATTAAA	-18
PB.11701.2	chr9	+	2984	13	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	5	986	combination_of_known_junctions	FALSE	canonical	1	12476	junction_5	19349.287966371154	NA	2	NA	TRUE	NA	NA	NA	C	coding	498	1497	183	1679	20.0	-84	True	ATTAAA	-20
PB.7211.9	chr20	+	2724	14	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	3	-16	combination_of_known_junctions	FALSE	canonical	1	76782	junction_1	197610.07249101784	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	195	1526	5.0	-24	True	AATAAA	-13
PB.11701.4	chr9	+	4286	13	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	9	2303	combination_of_known_junctions	FALSE	canonical	1	12476	junction_5	19349.287966371154	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	168	1664	10.0	-69	True	ATTAAA	-16
PB.6984.32	chr2	-	2441	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-889	-424673	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	0	NA	TRUE	NA	NA	NA	B	coding	300	903	209	1111	80.0	-15	True	AAGAAA	-44
PB.11701.6	chr9	+	4251	12	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	20	2302	combination_of_known_junctions	FALSE	canonical	1	10615	junction_4	17797.807389796573	NA	5	NA	TRUE	NA	NA	NA	C	coding	357	1074	557	1630	10.0	-58	True	ATTAAA	-15
PB.9667.27	chr5	+	3744	14	novel_in_catalog	CANX	novel	585	5	NA	NA	1	-279	combination_of_known_junctions	FALSE	canonical	1	590	junction_1	1562988.703363815	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	288	1742	45.0	-13	True	AGTAAA	-9
PB.11701.8	chr9	+	2522	12	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	-16	594	combination_of_known_junctions	FALSE	canonical	1	10615	junction_4	17797.807389796573	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	536	1609	50.0	-37	True	ATTAAA	-17
PB.8771.1	chr4	+	1342	9	novel_in_catalog	OCIAD1	novel	552	7	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	1	14260	junction_1	559920.7923757498	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	121	858	20.0	-6726	False	AATAAA	-17
PB.8771.2	chr4	+	5058	6	novel_in_catalog	OCIAD1	novel	552	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1481505	junction_1	74836.8883709097	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	4090	4575	20.0	-6658	False	AATAAA	-16
PB.8771.3	chr4	+	1821	9	novel_in_catalog	OCIAD1	novel	552	7	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	1	14260	junction_1	559920.7923757498	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	32	769	35.0	-6637	False	AATAAA	-16
PB.8771.4	chr4	+	2804	8	novel_in_catalog	OCIAD1	novel	552	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1481505	junction_2	176456.94074389333	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	1583	2320	20.0	0	True	AATAAA	-17
PB.9845.3	chr6	+	1372	8	full-splice_match	HLA-E	ENST00000376630.4	2601	8	40	1189	-3	-1189	multi-exon	TRUE	canonical	1	3991824	junction_1	1178466.805725549	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	26	1102	15.0	-5	True	ATTAAA	-18
PB.8771.6	chr4	+	1971	9	full-splice_match	OCIAD1	ENST00000264312.11	1414	9	9	-566	-8	-3	multi-exon	FALSE	canonical	1	1189274	junction_1	220656.72968153498	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	182	919	35.0	-14	True	AATAAA	-16
PB.8771.7	chr4	+	1325	9	full-splice_match	OCIAD1	ENST00000264312.11	1414	9	86	3	-2	-1	multi-exon	FALSE	canonical	1	1189274	junction_1	220656.72968153498	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	105	842	20.0	2	True	AATAAA	-16
PB.3656.15	chr14	+	2461	22	full-splice_match	PAPOLA	ENST00000216277.12	4519	22	15	2043	6	9	multi-exon	FALSE	canonical	1	516762	junction_12	274573.26895494247	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	206	2443	45.0	-2	True	AATAAA	-38
PB.9845.2	chr6	+	2330	5	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	-6	-6	intron_retention	TRUE	non_canonical	0	0	junction_4	2563552.4253855236	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	627	1337	10.0	-8	True	AATAAA	-24
PB.1780.9	chr11	-	2786	7	novel_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6607	-74727	intron_retention	FALSE	canonical	1	9003	junction_2	155070.06111611475	NA	0	NA	TRUE	NA	NA	NA	B	coding	265	798	236	1033	80.0	1	True	NA	NA
PB.1780.8	chr11	-	3385	8	novel_not_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6629	-74650	intron_retention	FALSE	canonical	1	295	junction_5	149621.71496988868	NA	1	NA	TRUE	NA	NA	NA	B	coding	180	543	258	800	25.0	-21	True	AATAAA	-18
PB.1780.7	chr11	-	2708	7	novel_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6647	-74697	intron_retention	FALSE	canonical	1	9003	junction_2	158469.90377110164	NA	1	NA	TRUE	NA	NA	NA	B	coding	265	798	128	925	25.0	-39	True	AAAACA	-14
PB.1780.6	chr11	-	2802	8	novel_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6670	-74727	intron_retention	FALSE	canonical	1	78586	junction_3	136264.89839160145	NA	0	NA	TRUE	NA	NA	NA	B	coding	493	1482	151	1632	80.0	-62	True	NA	NA
PB.1780.5	chr11	-	2910	8	full-splice_match	TRIM5	ENST00000380034.7	2991	8	-1	82	-1	-22	multi-exon	FALSE	canonical	1	78586	junction_3	132145.8522130076	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	259	1740	80.0	-22	True	NA	NA
PB.1780.4	chr11	-	2907	7	novel_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6650	-74727	intron_retention	FALSE	canonical	1	9481	junction_3	145664.4615852359	NA	1	NA	TRUE	NA	NA	NA	B	coding	271	816	279	1094	80.0	-42	True	NA	NA
PB.1780.2	chr11	-	3332	8	full-splice_match	TRIM5	ENST00000380034.7	2991	8	-15	-326	-15	326	multi-exon	FALSE	canonical	1	78586	junction_3	132145.8522130076	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	273	1754	35.0	-36	True	AATAAA	-28
PB.1780.1	chr11	-	3215	8	novel_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6673	-74317	intron_retention	FALSE	canonical	1	78586	junction_3	136264.89839160145	NA	0	NA	TRUE	NA	NA	NA	B	coding	493	1482	154	1635	25.0	-65	True	AATAAA	-30
PB.9845.4	chr6	+	2485	8	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	62072	junction_2	2311250.3276820197	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	25	396	5.0	-4	True	AATAAA	-29
PB.9083.3	chr4	-	2534	6	novel_in_catalog	RWDD4	novel	2641	8	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	92	junction_1	12152.099802091818	NA	1	1	TRUE	NA	NA	NA	C	coding	160	483	254	736	25.0	-1	True	AATAAA	-18
PB.10129.2	chr6	-	4483	23	novel_in_catalog	HACE1	novel	4576	24	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	11807	junction_17	39437.30952544014	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	970	2916	10.0	-52	True	NA	NA
PB.10129.1	chr6	-	4568	24	full-splice_match	HACE1	ENST00000262903.8	4576	24	8	0	8	0	multi-exon	FALSE	canonical	1	40619	junction_23	34986.15998201766	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	282	2999	10.0	-52	True	NA	NA
PB.3656.16	chr14	+	4329	20	novel_not_in_catalog	PAPOLA	novel	547	5	NA	NA	8	-20	any annotated donor/acceptor	FALSE	canonical	1	3968	junction_11	390685.70228975604	NA	8	2	TRUE	NA	NA	NA	C	coding	694	2085	204	2288	75.0	0	True	AAAACA	-3
PB.10129.7	chr6	-	3744	24	full-splice_match	HACE1	ENST00000262903.8	4576	24	8	824	8	5	multi-exon	FALSE	canonical	1	40619	junction_23	34986.15998201766	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	282	2999	15.0	-52	True	ATTAAA	-18
PB.9845.7	chr6	+	1842	4	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	1947935.5196068478	NA	3	NA	TRUE	NA	NA	NA	C	coding	221	666	23	688	15.0	-2	True	AATAAA	-18
PB.10802.12	chr7	+	2621	16	novel_in_catalog	ST7	novel	2114	14	NA	NA	-18	-10	combination_of_known_junctions	FALSE	canonical	1	23170	junction_1	102595.74644494553	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	85	1704	60.0	6	True	NA	NA
PB.10129.4	chr6	-	4428	23	novel_in_catalog	HACE1	novel	4576	24	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	1	5389	junction_18	39794.348284400454	NA	0	NA	TRUE	NA	NA	NA	C	coding	827	2484	379	2862	10.0	-47	True	NA	NA
PB.11516.21	chr9	-	4422	16	novel_in_catalog	VCP	novel	4370	17	NA	NA	16	-37	intron_retention	FALSE	canonical	1	1397368	junction_15	596466.8928043757	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	259	2523	30.0	13	True	AATAAA	-17
PB.3656.11	chr14	+	2690	22	full-splice_match	PAPOLA	ENST00000216277.12	4519	22	11	1818	2	-114	multi-exon	FALSE	canonical	1	516762	junction_12	274573.26895494247	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	210	2447	60.0	-6	True	NA	NA
PB.11516.23	chr9	-	2984	16	full-splice_match	VCP	ENST00000493886.5	2942	16	-79	37	-1	-37	multi-exon	FALSE	canonical	1	1397368	junction_15	602546.2983121104	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	1347	2774	30.0	-4	True	AATAAA	-17
PB.9845.6	chr6	+	1890	7	novel_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-912	intron_retention	FALSE	canonical	1	3991824	junction_1	1088263.037756906	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	621	1343	80.0	-2	True	NA	NA
PB.11516.24	chr9	-	2493	16	novel_not_in_catalog	VCP	novel	4370	17	NA	NA	8	-83	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	918883.9547535816	NA	1	1	TRUE	NA	NA	NA	C	coding	742	2226	267	2492	70.0	5	True	NA	NA
PB.3656.10	chr14	+	3853	21	incomplete-splice_match	PAPOLA	ENST00000216277.12	4519	22	11	2716	2	-593	3prime_fragment	FALSE	canonical	1	516762	junction_12	281347.3212800283	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	210	2414	30.0	-6	True	TTTAAA	-13
PB.10923.1	chr7	+	1605	4	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	-10	-354	any annotated donor/acceptor	FALSE	canonical	1	4703	junction_1	8193.832490897583	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.9102.2	chr4	+	4661	5	full-splice_match	TLR3	ENST00000296795.7	6015	5	4	1350	1	-1350	multi-exon	FALSE	canonical	1	22180	junction_2	5371.574745826404	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	101	2815	40.0	0	True	AATAAA	-18
PB.10923.3	chr7	+	1937	4	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	-10	7	any annotated donor/acceptor	FALSE	canonical	1	2705	junction_2	9466.127202939026	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	0	True	AATAAA	-22
PB.10923.2	chr7	+	1920	4	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	-10	3	any annotated donor/acceptor	FALSE	canonical	1	1968	junction_2	10016.426941113616	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-18
PB.10923.5	chr7	+	3868	6	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	0	31252	any annotated donor/acceptor	FALSE	canonical	1	150	junction_2	32042.417091099727	NA	0	NA	TRUE	NA	NA	NA	B	coding	665	1998	259	2256	15.0	10	True	AATAAA	-20
PB.10923.4	chr7	+	4078	6	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	0	31251	any annotated donor/acceptor	FALSE	canonical	1	360	junction_2	31978.618272839743	NA	1	NA	TRUE	NA	NA	NA	B	coding	665	1998	470	2467	15.0	10	True	AATAAA	-19
PB.10923.7	chr7	+	3676	5	novel_in_catalog	LINC00996	novel	2043	4	NA	NA	1	31191	no_combination_of_known_junctions	FALSE	canonical	1	1614	junction_1	32082.278636343774	NA	0	NA	TRUE	NA	NA	NA	B	coding	665	1998	128	2125	60.0	11	True	NA	NA
PB.10923.6	chr7	+	3804	6	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	0	31187	any annotated donor/acceptor	TRUE	canonical	1	252	junction_1	29763.718742119574	NA	0	NA	TRUE	NA	NA	NA	B	coding	665	1998	260	2257	60.0	10	True	NA	NA
PB.10923.9	chr7	+	2092	4	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	2705	junction_2	9669.316016255867	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	10	True	AATAAA	-18
PB.7211.6	chr20	+	2615	1	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-2	-15063	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-29	True	NA	NA
PB.622.2	chr1	+	2355	3	full-splice_match	SLC16A1-AS1	ENST00000428411.5	8757	3	-54	6456	-8	576	multi-exon	FALSE	canonical	1	23334	junction_1	169.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-54	True	NA	NA
PB.533.16	chr1	-	1907	3	incomplete-splice_match	ZNF644	ENST00000370440.5	5702	6	2	24365	2	1286	3prime_fragment	FALSE	canonical	1	13028	junction_2	77526.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1614	292	1905	70.0	1	True	NA	NA
PB.7211.7	chr20	+	2260	12	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	1	62183	junction_1	228826.87335365554	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	446	1144	5.0	-27	True	AATAAA	-13
PB.533.19	chr1	-	1807	3	incomplete-splice_match	ZNF644	ENST00000370440.5	5702	6	-34	24501	-34	1150	3prime_fragment	FALSE	canonical	1	13028	junction_2	77526.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1479	328	1806	60.0	-35	True	AAAACA	-26
PB.1990.1	chr11	+	3399	1	antisense	novelGene_TUT1_AS_novelGene_AP002990.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	99	300	1305	1604	85.0	-18	True	NA	NA
PB.533.18	chr1	-	1881	3	novel_in_catalog	ZNF644	novel	5702	6	NA	NA	17	1150	no_combination_of_known_junctions	FALSE	canonical	1	25808	junction_2	71136.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	493	1479	402	1880	60.0	37	True	AAAACA	-26
PB.5261.1	chr17	-	4675	31	novel_in_catalog	AC087289.3	novel	4270	32	NA	NA	-10922	-5180	no_combination_of_known_junctions	TRUE	canonical	1	8626	junction_30	24937.603953333874	NA	0	NA	TRUE	NA	NA	NA	B	coding	1147	3444	353	3796	25.0	-10	True	NA	NA
PB.1110.1	chr1	+	1956	13	full-splice_match	PPP2R5A	ENST00000261461.6	3128	13	-28	1200	-28	-259	multi-exon	FALSE	canonical	1	248262	junction_1	89909.46653702391	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1353	603	1955	60.0	-17	True	AAAAAG	-17
PB.5261.2	chr17	-	4577	29	novel_in_catalog	AC087289.3	novel	4270	32	NA	NA	-10928	-5180	no_combination_of_known_junctions	FALSE	canonical	1	21728	junction_26	23825.44723748804	NA	1	NA	TRUE	NA	NA	NA	B	coding	1134	3405	294	3698	25.0	-16	True	NA	NA
PB.6303.4	chr2	+	2372	16	incomplete-splice_match	CPSF3	ENST00000238112.7	2345	18	62	4953	-21	-4944	3prime_fragment	FALSE	canonical	1	319804	junction_1	124686.12034569935	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	145	2004	30.0	-1	True	NA	NA
PB.10944.1	chr7	+	2286	1	full-splice_match	PAXIP1-AS1	ENST00000608317.1	2256	1	-32	2	-32	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-81	False	AATAAA	-36
PB.10944.2	chr7	+	1782	1	full-splice_match	PAXIP1-AS1	ENST00000608317.1	2256	1	-26	500	-26	-500	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-75	False	NA	NA
PB.4931.1	chr17	+	4190	1	intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-7504	False	NA	NA
PB.5461.3	chr18	-	2923	14	novel_in_catalog	PSTPIP2	novel	2900	14	NA	NA	-12	-2	no_combination_of_known_junctions	FALSE	canonical	1	10392	junction_5	59156.9947670588	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	97	1002	10.0	-25	True	AATAAA	-18
PB.5461.2	chr18	-	2957	14	novel_in_catalog	PSTPIP2	novel	2900	14	NA	NA	-24	-1	no_combination_of_known_junctions	FALSE	canonical	1	9564	junction_12	56204.688065642826	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	109	1035	10.0	9781	False	AATAAA	-19
PB.5461.1	chr18	-	3021	15	full-splice_match	PSTPIP2	ENST00000409746.5	3000	15	-22	1	-10	-1	multi-exon	FALSE	canonical	1	92329	junction_12	42859.3775198352	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	95	1099	10.0	-23	True	AATAAA	-19
PB.10572.3	chr7	+	1585	16	full-splice_match	ASL	ENST00000395332.7	1622	16	61	-24	51	1	multi-exon	FALSE	canonical	1	364872	junction_5	103120.65833088709	NA	6	NA	TRUE	NA	NA	NA	C	coding	464	1395	148	1542	0.0	-2	True	AATAAA	-17
PB.1147.1	chr1	+	2466	2	novel_not_in_catalog	AC138393.1	novel	624	4	NA	NA	-10	-5588	any annotated donor/acceptor	FALSE	canonical	1	5318	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	ATTAAA	-17
PB.11145.11	chr8	+	3847	9	full-splice_match	SDCBP	ENST00000260130.8	2167	9	92	-1772	0	1772	multi-exon	FALSE	canonical	1	278688	junction_5	325460.43059849745	NA	5	1	TRUE	NA	NA	NA	C	coding	298	897	59	955	35.0	0	True	ATTAAA	-25
PB.3064.1	chr13	-	3852	2	full-splice_match	SHISA2	ENST00000319420.3	2860	2	-989	-3	-989	3	multi-exon	FALSE	canonical	1	41720	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	295	888	1046	1933	10.0	-5	True	AATAAA	-20
PB.6303.8	chr2	+	1799	14	incomplete-splice_match	CPSF3	ENST00000460593.1	3157	18	8623	-6	8623	0	5prime_fragment	FALSE	canonical	1	495348	junction_2	102322.72040319325	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	24	1718	20.0	8519	False	AATAAA	-20
PB.11145.13	chr8	+	2269	10	novel_not_in_catalog	SDCBP	novel	556	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	652	junction_2	387208.95732178283	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	255	1151	20.0	0	True	AATAAA	-19
PB.1155.26	chr1	-	2808	14	full-splice_match	LBR	ENST00000338179.6	3812	14	-42	1046	28	541	multi-exon	FALSE	canonical	1	8329	junction_13	217181.63073490944	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	207	2054	50.0	-77	False	AATAAA	-23
PB.1155.27	chr1	-	2685	15	novel_not_in_catalog	LBR	novel	3745	14	NA	NA	78	541	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	221479.75437567927	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	84	1931	50.0	43	False	AATAAA	-23
PB.308.10	chr1	+	2685	5	full-splice_match	AKIRIN1	ENST00000432648.7	2741	5	54	2	-11	-2	multi-exon	FALSE	canonical	1	346640	junction_1	174229.70502669027	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	105	683	20.0	-11	True	ATTAAA	-17
PB.302.9	chr1	-	2936	19	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	162	junction_1	56121.59548718994	NA	3	NA	TRUE	NA	NA	NA	C	coding	749	2250	40	2289	10.0	-13	True	GATAAA	-17
PB.302.8	chr1	-	2973	19	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56147.647858372286	NA	2	1	TRUE	NA	NA	NA	C	coding	749	2250	32	2281	10.0	-5	True	GATAAA	-17
PB.9093.4	chr4	-	1507	12	full-splice_match	CENPU	ENST00000510146.5	1549	12	50	-8	50	8	multi-exon	FALSE	canonical	1	48269	junction_2	154113.903903724	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	19	981	40.0	8	True	AATAAA	-22
PB.9093.5	chr4	-	1574	13	full-splice_match	CENPU	ENST00000281453.9	1998	13	44	380	41	4	multi-exon	FALSE	canonical	1	169591	junction_12	113182.43179569654	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	28	1284	35.0	-1	True	AATAAA	-18
PB.302.5	chr1	-	3222	19	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56147.647858372286	NA	1	NA	TRUE	NA	NA	NA	C	coding	749	2250	40	2289	10.0	-13	True	GATAAA	-17
PB.302.4	chr1	-	3485	25	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	68282.84401887165	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	97	2838	10.0	-9	True	GATAAA	-17
PB.302.3	chr1	-	3910	18	full-splice_match	INPP5B	ENST00000373027.5	3905	18	-5	0	-5	0	multi-exon	FALSE	canonical	1	74624	junction_17	41132.823311702	NA	4	NA	TRUE	NA	NA	NA	C	coding	749	2250	43	2292	10.0	-16	True	GATAAA	-17
PB.9093.1	chr4	-	2493	13	full-splice_match	CENPU	ENST00000281453.9	1998	13	42	-537	39	537	multi-exon	FALSE	canonical	1	169591	junction_12	113182.43179569654	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	30	1286	35.0	-3	True	ATTAAA	-19
PB.9093.2	chr4	-	2419	12	full-splice_match	CENPU	ENST00000510146.5	1549	12	43	-913	43	529	multi-exon	FALSE	canonical	1	48269	junction_2	154113.903903724	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	26	988	40.0	1	True	ATTAAA	-11
PB.9093.3	chr4	-	1721	13	full-splice_match	CENPU	ENST00000281453.9	1998	13	30	247	27	137	multi-exon	FALSE	canonical	1	169591	junction_12	113182.43179569654	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	42	1298	45.0	-15	True	AATAAA	-14
PB.8827.10	chr4	-	4118	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	69621	junction_10	438019.4761726469	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	122	1471	30.0	13	True	AATAAA	-22
PB.3454.11	chr14	-	2705	19	full-splice_match	DLGAP5	ENST00000247191.6	2973	19	89	179	19	-179	multi-exon	FALSE	canonical	1	330348	junction_1	61511.101043698	NA	0	NA	TRUE	NA	NA	NA	C	coding	846	2541	129	2669	25.0	-5	True	AATAAA	-24
PB.5952.2	chr19	+	2478	5	full-splice_match	ZNF382	ENST00000439428.5	2742	5	-30	294	-8	3	multi-exon	FALSE	canonical	1	5075	junction_1	16266.880816554843	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	106	1755	20.0	-8	True	NA	NA
PB.5952.3	chr19	+	2881	5	novel_in_catalog	ZNF382	novel	2657	4	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	7344	junction_2	16210.108597723829	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	506	2158	20.0	-3	True	NA	NA
PB.8827.14	chr4	-	4252	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	1868	junction_10	454103.298903113	NA	4	NA	TRUE	NA	NA	NA	C	coding	449	1350	257	1606	30.0	-5	True	AATAAA	-21
PB.10441.5	chr7	-	2421	10	full-splice_match	GSDME	ENST00000342947.8	2592	10	166	5	-7	0	multi-exon	FALSE	canonical	1	8708	junction_9	103349.32253440749	NA	4	NA	TRUE	NA	NA	NA	C	coding	496	1491	261	1751	10.0	-9	True	ATTAAA	-17
PB.10441.7	chr7	-	6783	5	novel_in_catalog	GSDME	novel	2592	10	NA	NA	-50	-2	intron_retention	FALSE	canonical	1	268975	junction_2	43008.94236885511	NA	6	NA	TRUE	NA	NA	NA	C	coding	192	579	17	595	15.0	NA	False	ATTAAA	-15
PB.10441.8	chr7	-	2078	10	full-splice_match	GSDME	ENST00000645220.1	2250	10	15	157	15	-21	multi-exon	FALSE	canonical	1	65600	junction_9	88010.79803714885	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	74	1564	65.0	-1	True	ATTAAA	-5
PB.8827.19	chr4	-	4429	13	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	1	5092	junction_11	572244.7623431971	NA	7	NA	TRUE	NA	NA	NA	C	coding	449	1350	437	1786	25.0	-62	True	AATAAA	-18
PB.1601.3	chr10	-	1620	4	full-splice_match	NDUFB8	ENST00000466088.5	829	4	-16	-775	1	775	multi-exon	FALSE	canonical	1	3176483	junction_1	265060.34777889104	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	28	522	90.0	-9	True	NA	NA
PB.1601.2	chr10	-	3151	4	full-splice_match	NDUFB8	ENST00000466088.5	829	4	-15	-2307	2	1	multi-exon	FALSE	canonical	1	3176483	junction_1	265060.34777889104	NA	3	NA	TRUE	NA	NA	NA	C	coding	164	495	27	521	10.0	-8	True	AATAAA	-15
PB.1601.1	chr10	-	681	5	full-splice_match	NDUFB8	ENST00000299166.8	671	5	-11	1	4	-1	multi-exon	FALSE	canonical	1	1748055	junction_1	805847.7319122934	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	25	585	15.0	-6	True	AATAAA	-16
PB.8473.1	chr3	+	5584	11	novel_not_in_catalog	MBNL1	novel	1039	3	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	21160	junction_1	392104.5906499948	NA	8	NA	TRUE	NA	NA	NA	C	coding	382	1149	1024	2172	25.0	-9291	False	AATAAA	-36
PB.9162.10	chr5	-	4378	34	novel_not_in_catalog	DROSHA	novel	5305	35	NA	NA	0	110	any annotated donor/acceptor	FALSE	canonical	1	68096	junction_33	114124.51087133592	NA	1	1	TRUE	NA	NA	NA	C	coding	1320	3963	286	4248	20.0	-1	True	AATAAA	-17
PB.9162.13	chr5	-	4401	36	novel_in_catalog	DROSHA	novel	5305	35	NA	NA	16	42	combination_of_known_junctions	FALSE	canonical	1	117110	junction_30	97129.09151241842	NA	1	NA	TRUE	NA	NA	NA	C	coding	1340	4020	381	4400	55.0	-20	True	NA	NA
PB.3303.13	chr14	-	5798	31	novel_in_catalog	CHD8	novel	7422	38	NA	NA	0	-259	intron_retention	FALSE	canonical	1	33345	junction_30	94939.9058181835	NA	4	1	TRUE	NA	NA	NA	C	coding	1844	5532	267	5798	55.0	0	True	NA	NA
PB.9162.14	chr5	-	3993	31	incomplete-splice_match	DROSHA	ENST00000513349.5	4681	35	16	8115	16	-513	3prime_fragment	FALSE	canonical	1	114725	junction_25	87040.43455149005	NA	0	NA	TRUE	NA	NA	NA	C	coding	1204	3612	381	3992	40.0	-20	True	NA	NA
PB.8473.7	chr3	+	5348	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	510	-1	combination_of_known_junctions	FALSE	canonical	1	15693	junction_5	413423.84177553724	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	893	1936	25.0	0	True	AATAAA	-36
PB.8473.9	chr3	+	3374	11	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	549	525	combination_of_known_junctions	FALSE	canonical	1	30359	junction_1	391026.3916127529	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	854	2056	80.0	39	True	NA	NA
PB.3303.14	chr14	-	2062	6	incomplete-splice_match	CHD8	ENST00000646647.1	8471	38	-7	30681	-7	-7	3prime_fragment	FALSE	canonical	1	97548	junction_2	80837.68904762184	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1743	318	2060	60.0	-22	True	NA	NA
PB.3015.7	chr12	-	2167	7	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	128	0	any annotated donor/acceptor	FALSE	canonical	1	5416	junction_6	176547.5173144298	NA	2	NA	TRUE	NA	NA	NA	B	coding	207	624	543	1166	10.0	563	False	TATAAA	-23
PB.1976.1	chr11	+	845	2	full-splice_match	SDHAF2	ENST00000542074.1	835	2	15	-25	-4	25	multi-exon	FALSE	canonical	1	120148	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	-4	True	ATTAAA	-9
PB.801.1	chr1	-	3206	11	full-splice_match	PKLR	ENST00000342741.6	3047	11	-145	-14	-145	14	multi-exon	FALSE	canonical	1	21809	junction_10	15112.103862798192	NA	0	NA	TRUE	NA	NA	NA	A	coding	585	1758	156	1913	70.0	-151	False	NA	NA
PB.3454.14	chr14	-	2334	17	incomplete-splice_match	DLGAP5	ENST00000395425.6	2954	20	-34	3734	30	-1518	3prime_fragment	FALSE	canonical	1	337932	junction_9	56306.7192673516	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2217	118	2334	60.0	6	True	NA	NA
PB.10704.10	chr7	+	4313	7	full-splice_match	ZKSCAN5	ENST00000394170.6	4344	7	40	-9	40	9	multi-exon	FALSE	canonical	1	17640	junction_1	30352.805173767163	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	218	2731	15.0	0	True	NA	NA
PB.4747.2	chr17	+	2952	7	full-splice_match	ATP1B2	ENST00000250111.8	3153	7	-187	388	-187	-388	multi-exon	FALSE	canonical	1	232454	junction_1	45714.00453331804	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	595	1467	90.0	-1	True	NA	NA
PB.4747.1	chr17	+	3341	7	full-splice_match	ATP1B2	ENST00000250111.8	3153	7	-187	-1	-187	1	multi-exon	FALSE	canonical	1	232454	junction_1	45714.00453331804	NA	3	NA	TRUE	NA	NA	NA	C	coding	290	873	595	1467	5.0	-1	True	AATAAA	-40
PB.5475.3	chr18	-	4033	1	genic	RPL17-C18orf32_RPL17	novel	NA	NA	NA	NA	-3	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	159	480	19	498	50.0	16	False	AATAAA	-8
PB.5475.4	chr18	-	3071	2	full-splice_match	RPL17	ENST00000581741.1	596	2	-1593	-882	12	-10	multi-exon	FALSE	canonical	1	1817010	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	95	288	152	439	50.0	-17	True	AATAAA	-8
PB.3454.17	chr14	-	1756	13	incomplete-splice_match	DLGAP5	ENST00000395425.6	2954	20	-38	14877	26	-12661	3prime_fragment	FALSE	canonical	1	337932	junction_5	52451.75283349028	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1635	122	1756	40.0	2	True	NA	NA
PB.10704.16	chr7	+	4673	4	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	2	10	no_combination_of_known_junctions	FALSE	canonical	1	26115	junction_2	34180.152320706045	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	796	3090	15.0	-4	True	NA	NA
PB.10704.17	chr7	+	3522	4	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	2	2	no_combination_of_known_junctions	FALSE	canonical	1	26115	junction_2	34180.152320706045	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	796	3090	15.0	-4	True	AGTAAA	-17
PB.10704.18	chr7	+	2166	5	incomplete-splice_match	ZKSCAN5	ENST00000451158.5	3111	7	583	6260	4	-6260	internal_fragment	FALSE	canonical	1	36774	junction_3	25962.777503331574	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1371	794	2164	25.0	-2	True	NA	NA
PB.10704.19	chr7	+	4876	6	incomplete-splice_match	ZKSCAN5	ENST00000394170.6	4344	7	311	1	7	-1	5prime_fragment	FALSE	canonical	1	36774	junction_3	25505.36227541181	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	791	3304	20.0	1	True	NA	NA
PB.10932.5	chr7	-	1864	9	novel_in_catalog	FASTK	novel	1609	9	NA	NA	-10	1	intron_retention	FALSE	canonical	1	304787	junction_8	179126.47597049794	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	142	1470	15.0	-5	True	ATTAAA	-17
PB.10932.4	chr7	-	2731	7	novel_in_catalog	FASTK	novel	1609	9	NA	NA	5	1	intron_retention	FALSE	canonical	1	657720	junction_5	62286.70737449167	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	936	2306	15.0	4	True	ATTAAA	-17
PB.10932.3	chr7	-	2627	8	novel_in_catalog	FASTK	novel	1609	9	NA	NA	-10	2	intron_retention	FALSE	canonical	1	657720	junction_6	79349.6887235899	NA	13	1	TRUE	NA	NA	NA	C	coding	442	1329	904	2232	15.0	-5	True	ATTAAA	-18
PB.7215.6	chr20	+	2009	5	novel_not_in_catalog	GINS1	novel	3249	7	NA	NA	-39	12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	95148.1767626159	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	134	469	15.0	-41	True	NA	NA
PB.10932.1	chr7	-	3117	7	incomplete-splice_match	FASTK	ENST00000482806.5	1826	9	-26	-25	13	3	intron_retention	FALSE	canonical	1	653770	junction_2	72976.60644952524	NA	4	NA	TRUE	NA	NA	NA	C	coding	341	1026	1738	2763	20.0	-16	True	ATTAAA	-19
PB.8302.9	chr3	-	2257	8	full-splice_match	NEPRO	ENST00000473284.5	2056	8	121	-322	-7	-4	multi-exon	FALSE	canonical	1	68098	junction_7	95619.63837293796	NA	2	NA	TRUE	NA	NA	NA	C	coding	470	1413	230	1642	35.0	-20	False	ATTAAA	-19
PB.8283.6	chr3	+	1281	11	incomplete-splice_match	BBX	ENST00000325805.12	3517	18	0	33146	0	33	3prime_fragment	FALSE	canonical	1	126795	junction_1	43569.95126793235	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	993	288	1280	65.0	7	True	AATAAA	-39
PB.8283.7	chr3	+	3651	17	novel_in_catalog	BBX	novel	8930	17	NA	NA	-2	-227	combination_of_known_junctions	FALSE	canonical	1	12606	junction_1	70706.02693989388	NA	13	NA	TRUE	NA	NA	NA	C	coding	911	2736	258	2993	90.0	-2	True	NA	NA
PB.8283.4	chr3	+	3412	17	full-splice_match	BBX	ENST00000415149.6	8930	17	34	5484	-6	-18	multi-exon	FALSE	canonical	1	110799	junction_13	51014.725326638225	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	294	3029	90.0	1	True	NA	NA
PB.8283.5	chr3	+	1642	11	incomplete-splice_match	BBX	ENST00000325805.12	3517	18	-6	32791	-6	4	3prime_fragment	FALSE	canonical	1	126795	junction_1	43569.95126793235	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1347	294	1640	85.0	1	True	ATTAAA	-16
PB.8283.2	chr3	+	3784	18	full-splice_match	BBX	ENST00000325805.12	3517	18	-13	-254	2	-227	multi-exon	FALSE	canonical	1	126795	junction_1	48743.68313853637	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	301	3126	90.0	-6	True	NA	NA
PB.8283.3	chr3	+	4300	10	incomplete-splice_match	BBX	ENST00000416476.6	2178	17	-78	46824	4	-13908	3prime_fragment	FALSE	canonical	1	126795	junction_1	44496.87644717948	NA	8	NA	TRUE	NA	NA	NA	C	coding	305	918	299	1216	85.0	-4	True	NA	NA
PB.8283.1	chr3	+	3529	18	full-splice_match	BBX	ENST00000325805.12	3517	18	-33	21	7	-18	multi-exon	FALSE	canonical	1	126795	junction_1	48743.68313853637	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	321	3146	90.0	-2448	False	NA	NA
PB.8573.1	chr3	+	1639	3	full-splice_match	MAP3K13	ENST00000448876.5	1681	3	41	1	5	-1	multi-exon	FALSE	canonical	1	221393	junction_2	40423.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	6	True	AATAAA	-23
PB.1944.1	chr11	+	2386	1	antisense	novelGene_AP000781.2_AS_novelGene_SLC43A3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	5286	False	NA	NA
PB.7900.9	chr22	-	2417	10	full-splice_match	RABL2B	ENST00000395595.7	2428	10	7	4	3	-1	multi-exon	FALSE	canonical	1	210	junction_8	92883.35893653575	NA	1	1	TRUE	NA	NA	NA	C	coding	229	690	462	1151	45.0	-9	True	AGTAAA	-13
PB.8391.2	chr3	-	2972	1	novel_in_catalog	RPL32P3	novel	1555	3	NA	NA	5341	3174	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	169	510	1481	1990	95.0	8466	False	NA	NA
PB.8338.9	chr3	+	4107	4	incomplete-splice_match	CD86	ENST00000393627.6	1405	7	-27	10072	19	3430	intron_retention	FALSE	canonical	1	33628	junction_1	48701.58541110911	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	175	915	25.0	0	True	AGTAAA	-25
PB.8338.8	chr3	+	3403	3	novel_not_in_catalog	CD86	novel	1604	6	NA	NA	-27	4753	any annotated donor/acceptor	FALSE	canonical	1	401	junction_2	16613.5	NA	9	NA	TRUE	NA	NA	NA	C	coding	34	105	234	338	25.0	-1	True	NA	NA
PB.8338.5	chr3	+	2635	7	novel_not_in_catalog	CD86	novel	1604	6	NA	NA	-2678	0	any annotated donor/acceptor	FALSE	canonical	1	2867	junction_1	62436.76924163624	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	62	1033	30.0	0	True	AATAAA	-16
PB.8338.4	chr3	+	4170	1	novel_in_catalog	CD86	novel	1604	6	NA	NA	0	-32627	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.8338.7	chr3	+	2742	7	novel_in_catalog	CD86	novel	1604	6	NA	NA	-92	-1	combination_of_known_junctions	FALSE	canonical	1	4077	junction_1	62020.6563752934	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	17	1141	35.0	0	True	AATAAA	-15
PB.9257.10	chr5	+	3936	12	novel_in_catalog	NLN	novel	8661	13	NA	NA	17	1355	no_combination_of_known_junctions	FALSE	canonical	1	2374	junction_3	93529.01838891173	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	162	2168	40.0	-34	True	AATAAA	-19
PB.8338.1	chr3	+	2671	6	full-splice_match	CD86	ENST00000469710.5	1604	6	-6	-1061	-6	-1	multi-exon	FALSE	canonical	1	5318	junction_1	67013.07972448364	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	327	1070	35.0	-6	True	AATAAA	-15
PB.8338.3	chr3	+	1976	7	full-splice_match	CD86	ENST00000330540.6	2708	7	-12	744	-4	64	multi-exon	FALSE	canonical	1	82616	junction_1	36810.167068125804	NA	2	NA	TRUE	NA	NA	NA	C	coding	329	990	129	1118	65.0	-4	True	NA	NA
PB.8338.2	chr3	+	2719	7	full-splice_match	CD86	ENST00000330540.6	2708	7	-12	1	-4	-1	multi-exon	FALSE	canonical	1	82616	junction_1	36810.167068125804	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	129	1118	35.0	-4	True	AATAAA	-15
PB.10430.24	chr7	-	4042	3	full-splice_match	FAM126A	ENST00000467005.5	542	3	-37	-3463	1	-2123	multi-exon	FALSE	canonical	1	220324	junction_2	38303.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1	True	NA	NA
PB.10430.23	chr7	-	1985	10	novel_in_catalog	FAM126A	novel	13177	11	NA	NA	-5	690	no_combination_of_known_junctions	FALSE	canonical	1	18260	junction_5	83314.16528455247	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	706	1689	25.0	-6	True	AATAAA	-16
PB.10430.22	chr7	-	2424	12	full-splice_match	FAM126A	ENST00000409923.5	3130	12	-77	783	-31	691	multi-exon	FALSE	canonical	1	113725	junction_2	53141.989402787236	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	266	1525	25.0	-32	False	AATAAA	-17
PB.10430.21	chr7	-	2101	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	-1	11077	0	695	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	235	1800	20.0	-1	True	AATAAA	-21
PB.10430.20	chr7	-	3112	12	full-splice_match	FAM126A	ENST00000409923.5	3130	12	-44	62	1	-62	multi-exon	FALSE	canonical	1	113725	junction_2	53141.989402787236	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	233	1492	50.0	1	True	AATAAA	-18
PB.3053.4	chr13	-	1974	13	novel_not_in_catalog	MICU2	novel	1811	3	NA	NA	8	3	any annotated donor/acceptor	FALSE	canonical	1	2026	junction_2	189249.92731899014	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	10	1422	40.0	12	True	AATAAA	-17
PB.3053.5	chr13	-	1767	11	novel_in_catalog	MICU2	novel	1811	3	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	8489	junction_2	163982.71678396477	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	20	973	40.0	2	True	AATAAA	-17
PB.3053.2	chr13	-	2400	12	novel_not_in_catalog	MICU2	novel	1811	3	NA	NA	-2	3	any annotated donor/acceptor	FALSE	canonical	1	14401	junction_2	155152.3434248784	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	20	1231	40.0	2	True	AATAAA	-17
PB.3053.3	chr13	-	2243	13	novel_not_in_catalog	MICU2	novel	1811	3	NA	NA	-2	3	any annotated donor/acceptor	FALSE	canonical	1	642	junction_2	189487.1692927423	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	20	1231	40.0	2	True	AATAAA	-17
PB.9536.3	chr5	-	4247	2	novel_not_in_catalog	SPRY4	novel	4938	3	NA	NA	19	-1	any annotated donor/acceptor	FALSE	canonical	1	593	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	104	315	152	466	0.0	-1	True	NA	NA
PB.3053.1	chr13	-	1878	12	full-splice_match	MICU2	ENST00000382374.8	1920	12	46	-4	-3	4	multi-exon	TRUE	canonical	1	352042	junction_11	101251.71298418316	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	21	1325	35.0	1	True	AATAAA	-18
PB.8796.1	chr4	+	1629	5	novel_not_in_catalog	REST	novel	1334	4	NA	NA	-45	229	intron_retention	TRUE	canonical	0	0	junction_1	97593.37941780426	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1329	300	1628	75.0	-1086	False	AAGAAA	-44
PB.8796.3	chr4	+	1971	4	full-splice_match	REST	ENST00000309042.11	7300	4	-38	5367	-5	518	multi-exon	FALSE	canonical	1	60542	junction_1	75774.01089350418	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1617	353	1969	75.0	11	True	NA	NA
PB.8796.2	chr4	+	1646	4	full-splice_match	REST	ENST00000309042.11	7300	4	-2	5656	-2	229	multi-exon	FALSE	canonical	1	60542	junction_1	75774.01089350418	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1329	317	1645	75.0	-17	True	AAGAAA	-44
PB.8796.5	chr4	+	1862	4	full-splice_match	REST	ENST00000309042.11	7300	4	-6	5444	-6	441	multi-exon	FALSE	canonical	1	60542	junction_1	75774.01089350418	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	321	1862	70.0	-21	True	NA	NA
PB.8796.4	chr4	+	7301	4	full-splice_match	REST	ENST00000309042.11	7300	4	-9	8	-9	0	multi-exon	FALSE	canonical	1	60542	junction_1	75774.01089350418	NA	1	NA	TRUE	NA	NA	NA	C	coding	1097	3294	324	3617	35.0	-24	True	AATAAA	-6
PB.8796.6	chr4	+	1727	4	full-splice_match	REST	ENST00000619101.4	7114	4	28	5359	28	518	multi-exon	FALSE	canonical	1	19541	junction_1	94975.76429922647	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1617	109	1725	75.0	24	True	NA	NA
PB.3701.1	chr14	-	3489	2	full-splice_match	CDCA4	ENST00000336219.3	2513	2	66	-1042	-22	1042	multi-exon	FALSE	canonical	1	345581	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	91	816	15.0	-4	True	AATACA	-16
PB.3701.2	chr14	-	2499	2	full-splice_match	CDCA4	ENST00000336219.3	2513	2	78	-64	-10	64	multi-exon	FALSE	canonical	1	345581	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	79	804	15.0	8	True	TATAAA	-17
PB.3701.3	chr14	-	2458	2	full-splice_match	CDCA4	ENST00000336219.3	2513	2	5	50	5	-50	multi-exon	FALSE	canonical	1	345581	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	152	877	15.0	3850	False	AATAAA	-13
PB.3701.4	chr14	-	2074	2	full-splice_match	CDCA4	ENST00000336219.3	2513	2	68	371	-20	-8	multi-exon	FALSE	canonical	1	345581	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	89	814	45.0	-2	True	ATTAAA	-13
PB.3701.5	chr14	-	2131	2	novel_not_in_catalog	CDCA4	novel	2513	2	NA	NA	-3879	-9	intron_retention	FALSE	canonical	1	4314	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	147	872	45.0	-34	True	ATTAAA	-12
PB.3701.6	chr14	-	1332	2	full-splice_match	CDCA4	ENST00000336219.3	2513	2	45	1136	-43	-773	multi-exon	FALSE	canonical	1	345581	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	112	837	30.0	-25	True	TATAAA	-36
PB.11282.38	chr8	-	3076	20	incomplete-splice_match	UBR5	ENST00000220959.8	9418	59	-41	57599	29	-12468	3prime_fragment	FALSE	canonical	1	132976	junction_12	85307.43437536011	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2580	497	3076	45.0	163	False	AATAAA	-23
PB.8613.9	chr3	+	3786	16	novel_not_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	0	-661	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	41445.09871754037	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	1350	1802	100.0	-3	True	NA	NA
PB.8573.3	chr3	+	3588	14	full-splice_match	MAP3K13	ENST00000265026.7	9876	14	2	6286	2	0	multi-exon	FALSE	canonical	1	5937	junction_1	6634.649738149634	NA	0	NA	TRUE	NA	NA	NA	C	coding	966	2901	333	3233	85.0	-14	False	NA	NA
PB.777.1	chr1	+	3374	25	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	205789	junction_1	310255.8596449962	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	77	3025	10.0	-15	True	AATAAA	-19
PB.6535.13	chr2	-	3706	13	novel_in_catalog	C2orf42	novel	579	2	NA	NA	-18	-28838	intron_retention	FALSE	canonical	1	48617	junction_8	229936.57486190018	NA	4	NA	TRUE	NA	NA	NA	C	coding	246	741	1926	2666	20.0	-19	True	AATACA	-23
PB.4757.4	chr17	+	2264	3	incomplete-splice_match	CNTROB	ENST00000576538.5	784	5	107	-356	-34	356	intron_retention	FALSE	canonical	1	223470	junction_1	19279.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	146	441	873	1313	90.0	0	True	NA	NA
PB.4757.5	chr17	+	3513	20	novel_in_catalog	CNTROB	novel	784	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	16783	junction_1	92994.54422325462	NA	1	NA	TRUE	NA	NA	NA	B	coding	903	2712	736	3447	20.0	10	True	AATAAA	-15
PB.11385.2	chr8	-	2791	8	incomplete-splice_match	NRBP2	ENST00000529747.5	3693	13	1252	124	-703	-3	5prime_fragment	FALSE	canonical	1	225816	junction_1	36912.45225433514	NA	0	NA	TRUE	NA	NA	NA	B	coding	264	795	3	797	25.0	2286	False	NA	NA
PB.6535.10	chr2	-	3390	12	full-splice_match	TIA1	ENST00000415783.6	4633	12	30	1213	-8	-453	multi-exon	FALSE	canonical	1	80459	junction_8	188716.3597837149	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	201	1328	25.0	-16	True	ATTAAA	-19
PB.4757.2	chr17	+	3636	19	novel_not_in_catalog	CNTROB	novel	784	5	NA	NA	-40	2	intron_retention	TRUE	canonical	1	10248	junction_17	102399.62410955314	NA	2	1	TRUE	NA	NA	NA	B	coding	895	2688	879	3566	25.0	-6	True	AATAAA	-19
PB.4757.3	chr17	+	3832	19	novel_in_catalog	CNTROB	novel	784	5	NA	NA	-34	1	intron_retention	FALSE	canonical	1	6405	junction_4	113917.65423771985	NA	7	NA	TRUE	NA	NA	NA	B	coding	686	2061	1629	3689	25.0	0	True	AATAAA	-16
PB.7888.4	chr22	-	4612	29	incomplete-splice_match	SBF1	ENST00000380817.7	8008	41	10179	1808	2510	-2	5prime_fragment	TRUE	canonical	1	169154	junction_13	136439.94359066643	NA	1	NA	TRUE	NA	NA	NA	B	coding	1408	4227	52	4278	5.0	5086	False	TATAAA	-15
PB.7888.5	chr22	-	4186	25	incomplete-splice_match	SBF1	ENST00000348911.10	6045	40	11508	7	3921	-3	5prime_fragment	FALSE	canonical	1	173954	junction_12	136069.9874193054	NA	4	NA	TRUE	NA	NA	NA	B	coding	1241	3726	132	3857	15.0	6497	False	TATAAA	-10
PB.5316.10	chr17	-	3653	13	novel_in_catalog	SLC38A10	novel	4300	16	NA	NA	-2	4	intron_retention	FALSE	canonical	1	218209	junction_7	114973.32484030082	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	387	2663	15.0	-9	True	AATAAA	-22
PB.5316.11	chr17	-	2982	14	full-splice_match	SLC38A10	ENST00000288439.9	2708	14	49	-323	49	4	multi-exon	FALSE	canonical	1	218209	junction_8	110508.0345943467	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	298	2640	15.0	-1	True	AATAAA	-22
PB.2143.1	chr11	+	4700	30	novel_not_in_catalog	INPPL1	novel	375	2	NA	NA	157	5	intron_retention	TRUE	non_canonical	0	0	junction_2	280609.8829728611	NA	1	NA	TRUE	NA	NA	NA	B	coding	1016	3051	893	3943	55.0	-4398	False	AATAAA	-22
PB.5316.13	chr17	-	2145	9	incomplete-splice_match	SLC38A10	ENST00000288439.9	2708	14	-30	20575	8	7928	3prime_fragment	FALSE	canonical	1	218209	junction_3	78149.91058496165	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	377	1513	100.0	1	True	NA	NA
PB.2143.7	chr11	+	2026	6	incomplete-splice_match	INPPL1	ENST00000538751.5	4656	27	7414	1	1615	-1	5prime_fragment	FALSE	canonical	1	476183	junction_4	124383.85048968374	NA	0	NA	TRUE	NA	NA	NA	B	coding	415	1248	28	1275	50.0	6796	False	AATAAA	-16
PB.2143.6	chr11	+	2921	15	incomplete-splice_match	INPPL1	ENST00000538751.5	4656	27	4358	-6	-69	6	5prime_fragment	FALSE	canonical	1	476183	junction_13	231041.17988797044	NA	0	NA	TRUE	NA	NA	NA	B	coding	710	2133	31	2163	60.0	3740	False	AATAAA	-23
PB.9170.1	chr5	-	8742	24	full-splice_match	ADAMTS12	ENST00000504830.5	8774	24	32	0	32	0	multi-exon	FALSE	canonical	1	28856	junction_15	6950.378922909361	NA	2	NA	TRUE	NA	NA	NA	A	coding	1594	4785	305	5089	10.0	-53	False	AATAAA	-13
PB.664.1	chr1	-	4750	22	novel_in_catalog	NBPF15	novel	4272	19	NA	NA	11	-106	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	100.72953841499051	NA	6	2	TRUE	NA	NA	NA	B	coding	670	2013	1221	3233	15.0	5	True	ATTAAA	-15
PB.2888.5	chr12	-	1644	5	full-splice_match	GLTP	ENST00000318348.8	2356	5	36	676	-31	642	multi-exon	FALSE	canonical	1	67621	junction_3	170727.52983683534	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	79	708	90.0	88	False	NA	NA
PB.2888.4	chr12	-	1963	6	full-splice_match	GLTP	ENST00000617457.4	969	6	-58	-936	-11	642	multi-exon	FALSE	canonical	1	8362	junction_3	187156.26939389447	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	521	1027	90.0	-5	True	NA	NA
PB.5487.5	chr18	+	6013	10	full-splice_match	POLI	ENST00000579534.5	6133	10	123	-3	8	3	multi-exon	FALSE	canonical	1	43752	junction_1	30459.795756957326	NA	4	NA	TRUE	NA	NA	NA	C	coding	740	2223	21	2243	25.0	-65	True	NA	NA
PB.5487.4	chr18	+	4262	9	novel_in_catalog	POLI	novel	6133	10	NA	NA	-1	3	intron_retention	FALSE	canonical	1	6990	junction_6	44160.70364005056	NA	6	NA	TRUE	NA	NA	NA	C	coding	288	867	1932	2798	35.0	-74	True	AATAAA	-21
PB.2888.1	chr12	-	2335	5	full-splice_match	GLTP	ENST00000318348.8	2356	5	20	1	20	-1	multi-exon	FALSE	canonical	1	67621	junction_3	170727.52983683534	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	95	724	15.0	29	True	AATAAA	-23
PB.5487.2	chr18	+	2459	10	full-splice_match	POLI	ENST00000579534.5	6133	10	167	3507	4	3	multi-exon	FALSE	canonical	1	43752	junction_1	30459.795756957326	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	52	2199	35.0	-21	True	AATAAA	-21
PB.2888.3	chr12	-	2159	6	novel_not_in_catalog	GLTP	novel	2356	5	NA	NA	-52	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	179435.8066099406	NA	2	1	TRUE	NA	NA	NA	C	coding	209	630	167	796	15.0	0	True	AATAAA	-23
PB.2888.2	chr12	-	2217	6	novel_not_in_catalog	GLTP	novel	2356	5	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	179435.8066099406	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	129	758	15.0	-5	True	AATAAA	-23
PB.11538.16	chr9	+	2451	18	full-splice_match	MELK	ENST00000298048.6	2485	18	32	2	-1	-1	multi-exon	FALSE	canonical	1	114404	junction_1	89443.56048164237	NA	1	NA	TRUE	NA	NA	NA	C	coding	651	1956	153	2108	10.0	-3	True	AATAAA	-15
PB.10714.15	chr7	-	2445	5	full-splice_match	ZNF3	ENST00000441298.5	574	5	29	-1900	0	-3	multi-exon	FALSE	canonical	1	5746	junction_3	86159.96720490322	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	250	1482	85.0	13	True	NA	NA
PB.6398.3	chr2	+	4876	6	novel_in_catalog	LCLAT1	novel	583	4	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	7101	junction_1	46788.82576000385	NA	5	NA	TRUE	NA	NA	NA	C	coding	376	1131	142	1272	15.0	-5	True	AATAAA	-19
PB.11803.9	chr9	+	2681	1	novel_in_catalog	STXBP1	novel	2068	20	NA	NA	2	1196	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-10	True	NA	NA
PB.10714.14	chr7	-	2358	4	full-splice_match	ZNF3	ENST00000412947.5	595	4	-10	-1753	0	0	multi-exon	FALSE	canonical	1	22569	junction_3	90317.89963235417	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	160	1392	90.0	-18	True	NA	NA
PB.10714.16	chr7	-	2880	5	novel_in_catalog	ZNF3	novel	1441	6	NA	NA	1	-6	intron_retention	FALSE	canonical	1	162950	junction_3	26337.73237557668	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	817	1920	75.0	-14	True	NA	NA
PB.10706.12	chr7	+	3572	3	full-splice_match	ZNF655	ENST00000252713.8	2535	3	93	-1130	1	0	multi-exon	FALSE	canonical	1	50759	junction_2	102934.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	145	1620	85.0	29	True	NA	NA
PB.10706.13	chr7	+	4078	8	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	92468.00079056581	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	1014	2000	50.0	-173	False	NA	NA
PB.10706.10	chr7	+	3900	6	novel_in_catalog	ZNF655	novel	1601	5	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	28609	junction_4	75795.22447648006	NA	3	NA	TRUE	NA	NA	NA	C	coding	597	1794	155	1948	85.0	19	True	NA	NA
PB.10706.11	chr7	+	3892	6	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	102737.63586028248	NA	5	NA	TRUE	NA	NA	NA	C	coding	328	987	826	1812	45.0	28	True	NA	NA
PB.10706.14	chr7	+	2675	5	novel_not_in_catalog	ZNF655	novel	1601	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	68203.0331194112	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	221	1585	50.0	-28	True	NA	NA
PB.10706.15	chr7	+	1777	4	novel_in_catalog	ZNF655	novel	1601	5	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	35098	junction_1	77867.27173994362	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	740	1135	15.0	-3	True	NA	NA
PB.2036.2	chr11	-	1657	3	full-splice_match	BATF2	ENST00000301887.8	2142	3	74	411	47	-408	multi-exon	FALSE	canonical	1	28845	junction_1	374.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	58	882	70.0	-1	True	NA	NA
PB.881.6	chr1	+	4611	5	novel_not_in_catalog	FCGR2B	novel	1440	7	NA	NA	-11	-48	intron_retention	FALSE	non_canonical	0	0	junction_1	102997.00611425558	NA	3	NA	TRUE	NA	NA	NA	C	coding	104	315	2091	2405	40.0	NA	False	AATAGA	-44
PB.6798.3	chr2	-	3263	17	incomplete-splice_match	BAZ2B	ENST00000392783.6	8289	37	132	81619	9	1	3prime_fragment	FALSE	canonical	1	96489	junction_7	39041.35531074709	NA	1	NA	TRUE	NA	NA	NA	B	coding	966	2898	365	3262	45.0	48	False	AAAAAG	-28
PB.2036.1	chr11	-	2138	3	full-splice_match	BATF2	ENST00000301887.8	2142	3	1	3	1	0	multi-exon	FALSE	canonical	1	28845	junction_1	374.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	131	955	10.0	9954	False	AATAAA	-16
PB.6798.5	chr2	-	3076	16	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	-31	-476	intron_retention	FALSE	canonical	1	23843	junction_15	48675.31730257818	NA	0	NA	TRUE	NA	NA	NA	B	coding	944	2832	244	3075	30.0	1	True	GATAAA	-18
PB.6798.4	chr2	-	3062	16	incomplete-splice_match	BAZ2B	ENST00000392783.6	8289	37	234	85902	-8	-509	3prime_fragment	FALSE	canonical	1	96489	junction_6	39791.085024775195	NA	0	NA	TRUE	NA	NA	NA	B	coding	933	2799	263	3061	65.0	17	True	NA	NA
PB.6798.7	chr2	-	3100	15	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	110	-476	intron_retention	FALSE	canonical	1	15723	junction_12	58420.54596227779	NA	1	NA	TRUE	NA	NA	NA	B	coding	942	2826	274	3099	30.0	8	True	GATAAA	-18
PB.6798.6	chr2	-	3070	15	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	-30	-476	intron_retention	FALSE	canonical	1	67909	junction_3	44685.21668909104	NA	1	NA	TRUE	NA	NA	NA	B	coding	910	2730	340	3069	30.0	-60	True	GATAAA	-18
PB.6798.8	chr2	-	2967	15	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	-24	-476	intron_retention	FALSE	canonical	1	23843	junction_14	53048.9752450603	NA	1	1	TRUE	NA	NA	NA	B	coding	910	2730	237	2966	30.0	8	True	GATAAA	-18
PB.10714.12	chr7	-	2601	6	novel_not_in_catalog	ZNF3	novel	1441	6	NA	NA	-112	0	any annotated donor/acceptor	FALSE	canonical	1	3382	junction_5	77738.33034378858	NA	5	1	TRUE	NA	NA	NA	C	coding	446	1341	295	1635	90.0	8158	False	NA	NA
PB.8354.8	chr3	-	2266	15	novel_not_in_catalog	MYLK	novel	10027	34	NA	NA	14719	0	any annotated donor/acceptor	FALSE	canonical	1	34	junction_14	239767.00935610684	NA	1	1	TRUE	NA	NA	NA	B	coding	679	2040	167	2206	85.0	-2941	False	ATTAAA	-22
PB.2397.2	chr12	+	4331	9	full-splice_match	TSPAN9	ENST00000011898.9	4323	9	3	-11	3	5	multi-exon	FALSE	canonical	1	100009	junction_2	98634.17016992324	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	159	878	5.0	1	True	AATAAA	-33
PB.7500.14	chr21	-	3565	22	novel_in_catalog	GART	novel	3341	22	NA	NA	2	-4	no_combination_of_known_junctions	FALSE	canonical	1	5384	junction_21	216430.0955865029	NA	1	NA	TRUE	NA	NA	NA	C	coding	1010	3033	346	3378	25.0	1	True	AATAAA	-43
PB.2397.1	chr12	+	4378	9	novel_not_in_catalog	TSPAN9	novel	4284	8	NA	NA	3	-6	any annotated donor/acceptor	FALSE	canonical	1	61	junction_1	138118.333044927	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	223	942	35.0	1	True	AATAAA	-16
PB.972.3	chr1	+	6944	37	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-707	-7008	intron_retention	FALSE	non_canonical	0	0	junction_1	6890.548672528746	NA	2	NA	TRUE	NA	NA	NA	B	coding	1793	5382	1142	6523	30.0	3	True	ATTAAA	-16
PB.8524.18	chr3	+	2547	22	incomplete-splice_match	ECT2	ENST00000232458.9	4087	24	44	5785	0	-4602	3prime_fragment	FALSE	canonical	1	185991	junction_1	85203.08671162218	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2391	155	2545	70.0	0	True	AGTAAA	-43
PB.6085.5	chr19	-	2238	19	full-splice_match	EML2	ENST00000245925.7	2264	19	25	1	-1	-1	multi-exon	FALSE	canonical	1	204464	junction_18	65912.9150404972	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	27	1976	15.0	-6	True	AATAAA	-14
PB.648.1	chr1	-	4316	14	full-splice_match	GDAP2	ENST00000369443.9	8828	14	9	4503	9	2196	multi-exon	TRUE	canonical	1	55174	junction_13	29683.95485999427	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	242	1735	40.0	-1	True	ATTAAA	-21
PB.10845.1	chr7	+	2465	1	novel_in_catalog	LINC00513	novel	1616	5	NA	NA	24096	-48369	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6925	False	NA	NA
PB.8948.22	chr4	-	2362	6	incomplete-splice_match	CAMK2D	ENST00000508738.5	1470	18	-77	89455	-15	-86639	3prime_fragment	FALSE	canonical	1	317469	junction_5	25880.446809125995	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	78	512	65.0	-3	True	NA	NA
PB.5102.2	chr17	+	2269	11	full-splice_match	PDK2	ENST00000503176.5	3440	11	77	1094	-23	0	multi-exon	FALSE	canonical	1	327638	junction_10	79438.64547743749	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	85	1308	10.0	0	True	AGTAAA	-17
PB.5102.1	chr17	+	2613	11	full-splice_match	PDK2	ENST00000503176.5	3440	11	69	758	-31	26	multi-exon	TRUE	canonical	1	327638	junction_10	79438.64547743749	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	93	1316	25.0	-8	True	NA	NA
PB.164.4	chr1	+	2633	11	full-splice_match	ELOA	ENST00000609199.1	2671	11	-1	39	-1	-39	multi-exon	FALSE	canonical	1	227724	junction_1	87945.12800013427	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	34	2352	40.0	0	True	TTTAAA	-43
PB.9251.3	chr5	+	1891	14	full-splice_match	CWC27	ENST00000381070.7	2078	14	10	177	-6	-5	multi-exon	FALSE	canonical	1	289066	junction_9	45782.50778130838	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	208	1626	35.0	-9	True	AATAAA	-26
PB.6085.6	chr19	-	3177	20	novel_not_in_catalog	EML2	novel	2364	19	NA	NA	-68	0	any annotated donor/acceptor	FALSE	canonical	1	8937	junction_6	146772.08349228004	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	124	1869	20.0	-6	True	AATAAA	-13
PB.7744.9	chr22	-	4025	10	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	-28	-4	any annotated donor/acceptor	FALSE	canonical	1	684	junction_1	76863.67280781067	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	162	2216	30.0	-8	True	NA	NA
PB.7744.8	chr22	-	4066	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	-28	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	86510.75211633739	NA	1	1	TRUE	NA	NA	NA	C	coding	594	1785	65	1849	30.0	-8	True	NA	NA
PB.648.6	chr1	-	2299	13	full-splice_match	GDAP2	ENST00000369442.3	2436	13	-50	187	-3	-187	multi-exon	FALSE	canonical	1	55174	junction_12	29582.40865820147	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	254	1744	75.0	-13	True	NA	NA
PB.7744.1	chr22	-	4270	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	190	-8	any annotated donor/acceptor	FALSE	canonical	1	684	junction_1	63632.64088107612	NA	4	1	TRUE	NA	NA	NA	C	coding	684	2055	411	2465	35.0	-1	True	NA	NA
PB.10983.13	chr8	+	1916	11	incomplete-splice_match	BLK	ENST00000529894.1	2017	12	51631	-70	290	0	5prime_fragment	FALSE	canonical	1	155346	junction_3	19956.45654518858	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	122	1426	10.0	-28	False	AATAAA	-15
PB.7744.3	chr22	-	3974	10	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	74980.74297288226	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	95	2149	15.0	-38	False	NA	NA
PB.7744.2	chr22	-	3954	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	234	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	63850.970562318	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	367	2421	15.0	-3	True	NA	NA
PB.7744.5	chr22	-	4529	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	-16	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	63850.970562318	NA	2	1	TRUE	NA	NA	NA	C	coding	684	2055	638	2692	30.0	4	True	NA	NA
PB.7744.4	chr22	-	4897	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	63850.970562318	NA	3	1	TRUE	NA	NA	NA	C	coding	684	2055	626	2680	30.0	-8	True	NA	NA
PB.5624.3	chr19	-	2443	10	full-splice_match	SH3GL1	ENST00000269886.7	2516	10	72	1	50	0	multi-exon	FALSE	canonical	1	357261	junction_9	194920.2825636454	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	108	1214	5.0	49	True	ATTAAA	-14
PB.7744.6	chr22	-	4224	8	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	81945.0885724267	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	619	2403	30.0	-1	True	NA	NA
PB.4749.4	chr17	-	2684	10	full-splice_match	TP53	ENST00000610292.4	2639	10	-65	20	4	-1	multi-exon	FALSE	canonical	1	446410	junction_9	119650.59790330046	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	433	1497	10.0	-60	False	AATAAA	-12
PB.212.18	chr1	-	2377	12	novel_not_in_catalog	FGR	novel	2729	13	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	5230	junction_9	175519.7484505626	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	790	1236	45.0	1	True	AGTAAA	-19
PB.4749.1	chr17	-	2512	11	full-splice_match	TP53	ENST00000269305.8	2579	11	47	20	0	-1	multi-exon	FALSE	canonical	1	446410	junction_10	113914.11799425917	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	144	1325	10.0	-5	True	AATAAA	-12
PB.18.17	chr1	-	4068	11	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-9	13	intron_retention	FALSE	canonical	1	614919	junction_10	318707.4745416085	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	2636	3532	45.0	-24	True	AATAAA	-33
PB.12194.1	chrX	-	1195	3	full-splice_match	TCEAL8	ENST00000372685.7	1222	3	26	1	8	-1	multi-exon	FALSE	canonical	1	604720	junction_2	7015.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	212	565	35.0	25	False	AATAAA	-19
PB.2597.12	chr12	+	2713	10	novel_in_catalog	TMBIM6	novel	469	4	NA	NA	6	-13	combination_of_known_junctions	FALSE	canonical	1	5369	junction_1	2180087.0106185675	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	186	899	90.0	-8994	False	NA	NA
PB.2597.13	chr12	+	2851	10	incomplete-splice_match	TMBIM6	ENST00000549385.5	2771	11	249	16	1	-13	5prime_fragment	FALSE	canonical	1	84000	junction_1	2157683.0154514657	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	324	1037	90.0	-8785	False	NA	NA
PB.2597.10	chr12	+	2981	11	novel_not_in_catalog	TMBIM6	novel	469	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	436	junction_1	2663807.0148227722	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	230	943	15.0	2	True	AATAAA	-19
PB.2597.11	chr12	+	2943	10	novel_in_catalog	TMBIM6	novel	469	4	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	5369	junction_1	2180087.0106185675	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	194	907	15.0	-9002	False	AATAAA	-17
PB.900.3	chr1	+	2234	7	novel_not_in_catalog	POGK	novel	954	5	NA	NA	-3	-1598	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	123309.90044148479	NA	2	NA	TRUE	NA	NA	NA	C	coding	591	1776	154	1929	55.0	-25	False	NA	NA
PB.900.2	chr1	+	2982	6	novel_not_in_catalog	POGK	novel	954	5	NA	NA	0	2247	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	129698.16464453148	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	161	1936	75.0	3	True	NA	NA
PB.2597.14	chr12	+	3059	10	incomplete-splice_match	TMBIM6	ENST00000549385.5	2771	11	265	-208	17	0	5prime_fragment	FALSE	canonical	1	84000	junction_1	2157683.0154514657	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	308	1021	15.0	0	True	AATAAA	-19
PB.2597.15	chr12	+	2961	10	full-splice_match	TMBIM6	ENST00000552370.5	882	10	-92	-1987	-92	1	multi-exon	FALSE	canonical	1	17175	junction_1	2176719.99106861	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	209	922	15.0	0	True	AATAAA	-20
PB.10449.41	chr7	-	1364	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-9	no_combination_of_known_junctions	FALSE	canonical	1	268032	junction_1	4632153.950811027	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	50.0	-1	True	AATAAA	-18
PB.10449.40	chr7	-	1757	13	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	11	-8	any annotated donor/acceptor	FALSE	canonical	1	78658	junction_3	5763330.754746532	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	197	1222	50.0	1	True	AATAAA	-19
PB.10449.43	chr7	-	5540	10	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	11	-635	intron_retention	FALSE	canonical	1	1986455	junction_9	4204724.879219261	NA	4	NA	TRUE	NA	NA	NA	C	coding	301	906	3058	3963	20.0	1	True	AATAAA	-23
PB.10449.42	chr7	-	2572	12	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	1	-9	intron_retention	FALSE	canonical	1	104464	junction_2	5275734.642715552	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	169	1194	50.0	0	True	AATAAA	-18
PB.2167.1	chr11	-	2626	1	genic	AP001972.4	novel	NA	NA	NA	NA	39722	1371	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	100	303	1830	2132	25.0	3181	False	ATTAAA	-10
PB.10449.44	chr7	-	2797	10	incomplete-splice_match	HNRNPA2B1	ENST00000608362.2	3497	11	528	17884	11	-637	3prime_fragment	FALSE	canonical	1	6843184	junction_9	3088624.0211955947	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	197	1222	25.0	1	True	AATAAA	-21
PB.10449.47	chr7	-	1592	10	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-17	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	4947481.737600583	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	234	1079	40.0	810	False	AATAAA	-14
PB.10449.46	chr7	-	1587	10	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	4546994.706752313	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	170	1066	30.0	-1	True	AATAAA	-22
PB.11567.2	chr9	-	2253	1	intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	109	330	966	1295	30.0	NA	False	NA	NA
PB.11567.1	chr9	-	4109	1	intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	133	402	2715	3116	20.0	NA	False	NA	NA
PB.3857.2	chr15	-	4065	13	full-splice_match	COPS2	ENST00000299259.10	2036	13	38	-2067	-19	2067	multi-exon	FALSE	canonical	1	259275	junction_9	194653.59068476548	NA	2	NA	TRUE	NA	NA	NA	C	coding	450	1353	46	1398	45.0	20	False	ATTAAA	-26
PB.3857.3	chr15	-	3888	13	full-splice_match	COPS2	ENST00000299259.10	2036	13	48	-1900	-9	1900	multi-exon	FALSE	canonical	1	259275	junction_9	194653.59068476548	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	36	1388	25.0	-15	True	ATTAAA	-44
PB.8217.13	chr3	-	1688	11	full-splice_match	SUCLG2	ENST00000307227.9	2352	11	10	654	3	-654	multi-exon	FALSE	canonical	1	28717	junction_3	128028.65870972014	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	19	1317	65.0	-3	True	NA	NA
PB.3857.1	chr15	-	4041	13	full-splice_match	COPS2	ENST00000388901.9	6628	13	34	2553	-14	2069	multi-exon	FALSE	canonical	1	407515	junction_9	160355.27195652158	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	41	1372	40.0	-20	True	ATTAAA	-28
PB.3857.6	chr15	-	3301	13	full-splice_match	COPS2	ENST00000388901.9	6628	13	24	3303	24	1319	multi-exon	FALSE	canonical	1	407515	junction_9	160355.27195652158	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	51	1382	35.0	15	False	AATAAA	-23
PB.3857.4	chr15	-	3791	13	full-splice_match	COPS2	ENST00000388901.9	6628	13	29	2808	-19	1814	multi-exon	FALSE	canonical	1	407515	junction_9	160355.27195652158	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	46	1377	45.0	20	False	TATAAA	-14
PB.3857.5	chr15	-	3307	13	full-splice_match	COPS2	ENST00000299259.10	2036	13	48	-1319	-9	1319	multi-exon	FALSE	canonical	1	259275	junction_9	194653.59068476548	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	36	1388	35.0	-15	True	AATAAA	-23
PB.7532.12	chr21	-	4104	2	full-splice_match	C2CD2	ENST00000478372.1	356	2	-472	-3276	-101	3276	multi-exon	FALSE	canonical	1	14456	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	344	778	30.0	-7	True	NA	NA
PB.3857.8	chr15	-	3079	13	full-splice_match	COPS2	ENST00000388901.9	6628	13	40	3509	-8	1113	multi-exon	FALSE	canonical	1	407515	junction_9	160355.27195652158	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	35	1366	80.0	-14	True	ATTAAA	-33
PB.3857.9	chr15	-	3101	13	full-splice_match	COPS2	ENST00000299259.10	2036	13	48	-1113	-9	1113	multi-exon	FALSE	canonical	1	259275	junction_9	194653.59068476548	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	36	1388	80.0	-15	True	ATTAAA	-33
PB.8398.1	chr3	-	2713	1	antisense	novelGene_ATP2C1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-25	False	ATTAAA	-20
PB.11628.11	chr9	+	3117	18	novel_not_in_catalog	NAA35	novel	2649	23	NA	NA	18303	-9	intron_retention	TRUE	canonical	1	14190	junction_5	93702.4089818584	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	449	1513	50.0	NA	False	AATAAA	-11
PB.3223.1	chr13	+	2367	5	full-splice_match	CLDN10	ENST00000299339.2	949	5	-5	-1413	-5	-99	multi-exon	FALSE	canonical	1	120709	junction_1	21916.83648476668	NA	0	NA	TRUE	NA	NA	NA	A	coding	228	687	35	721	60.0	0	True	NA	NA
PB.7685.1	chr22	+	2393	5	novel_in_catalog	GAS2L1	novel	2925	6	NA	NA	-5	1	no_combination_of_known_junctions	FALSE	canonical	1	10356	junction_3	91910.74548815007	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	1016	2104	10.0	-42	True	AGTAAA	-15
PB.7685.3	chr22	+	2509	6	full-splice_match	GAS2L1	ENST00000621062.4	2483	6	-29	3	0	-3	multi-exon	FALSE	canonical	1	5572	junction_1	118495.90911757249	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	179	2224	10.0	-37	True	AGTAAA	-11
PB.7685.2	chr22	+	2487	6	full-splice_match	GAS2L1	ENST00000616432.4	2925	6	439	-1	-2	1	multi-exon	FALSE	canonical	1	62716	junction_1	99684.41972625411	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	153	2198	10.0	-39	True	AGTAAA	-15
PB.11326.7	chr8	-	2259	16	incomplete-splice_match	ATAD2	ENST00000521496.5	3133	19	-35	2611	-2	-2611	3prime_fragment	FALSE	canonical	1	251410	junction_15	75126.27409605481	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2178	80	2257	65.0	-7	True	NA	NA
PB.550.1	chr1	-	3174	7	full-splice_match	GCLM	ENST00000370238.7	4857	7	-126	1809	-80	20	multi-exon	FALSE	canonical	1	171114	junction_6	130124.8177323945	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	374	1198	95.0	-2	True	NA	NA
PB.8877.9	chr4	+	3565	22	novel_in_catalog	HERC5	novel	3513	23	NA	NA	2	-23	intron_retention	FALSE	canonical	1	69315	junction_1	45425.681138564054	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2784	152	2935	75.0	0	True	NA	NA
PB.8877.8	chr4	+	3054	23	full-splice_match	HERC5	ENST00000264350.7	3513	23	0	459	0	-248	multi-exon	FALSE	canonical	1	69315	junction_1	51766.037509150345	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2901	154	3054	60.0	-2	True	NA	NA
PB.402.21	chr1	+	2643	21	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	2	-68	combination_of_known_junctions	FALSE	canonical	1	47348	junction_1	248729.2536543048	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	117	2036	40.0	2	True	ATTAAA	-16
PB.402.27	chr1	+	2647	19	novel_not_in_catalog	OSBPL9	novel	3352	26	NA	NA	10	-133	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	271996.30967354076	NA	1	1	TRUE	NA	NA	NA	C	coding	521	1566	540	2105	35.0	-14	True	ATTAAA	-20
PB.8032.1	chr3	-	2449	3	full-splice_match	EIF1B-AS1	ENST00000629723.1	2399	3	-51	1	0	-1	multi-exon	FALSE	canonical	1	1613	junction_1	7070.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-1	True	NA	NA
PB.4438.8	chr16	-	1814	7	full-splice_match	NUDT21	ENST00000300291.9	4436	7	14	2608	-10	2586	multi-exon	FALSE	canonical	1	978189	junction_6	140436.20324545947	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	160	843	60.0	-11	False	NA	NA
PB.9886.1	chr6	-	3972	28	full-splice_match	EHMT2	ENST00000375537.8	3965	28	-13	6	-10	-6	multi-exon	FALSE	canonical	1	113440	junction_27	168499.67414988458	NA	1	1	TRUE	NA	NA	NA	C	coding	1210	3633	21	3653	30.0	-1	True	AATAAA	-14
PB.4438.7	chr16	-	2401	1	incomplete-splice_match	NUDT21	ENST00000300291.9	4436	7	19819	23	3656	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	466	False	NA	NA
PB.8877.3	chr4	+	3440	23	novel_not_in_catalog	HERC5	novel	3513	23	NA	NA	-4	-23	any annotated donor/acceptor	FALSE	canonical	1	6203	junction_20	62662.21739435064	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	158	2821	75.0	-6	True	NA	NA
PB.8877.2	chr4	+	3625	23	full-splice_match	HERC5	ENST00000264350.7	3513	23	-5	-107	-5	107	multi-exon	FALSE	canonical	1	69315	junction_1	51766.037509150345	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3075	159	3233	25.0	-7	True	AATATA	-21
PB.4438.2	chr16	-	4356	8	novel_not_in_catalog	NUDT21	novel	4436	7	NA	NA	-3	-8	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_7	415068.485405009	NA	5	NA	TRUE	NA	NA	NA	C	coding	210	633	153	785	40.0	-4	True	AATAAA	-10
PB.8877.4	chr4	+	3002	22	incomplete-splice_match	HERC5	ENST00000264350.7	3513	23	-1	1587	-1	-1376	3prime_fragment	FALSE	canonical	1	69315	junction_1	52981.70190870483	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2847	155	3001	60.0	-3	True	NA	NA
PB.8877.7	chr4	+	3266	22	novel_in_catalog	HERC5	novel	3513	23	NA	NA	0	-23	no_combination_of_known_junctions	FALSE	canonical	1	1578	junction_3	63712.37881486951	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	154	3006	75.0	-2	True	NA	NA
PB.5592.5	chr19	-	4654	12	full-splice_match	LMNB2	ENST00000325327.3	4671	12	16	1	16	-1	multi-exon	FALSE	canonical	1	516361	junction_11	131828.9531299511	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	108	1910	15.0	-22	True	AATAAA	-13
PB.6177.2	chr19	-	3907	7	novel_not_in_catalog	ZNF432	novel	764	5	NA	NA	-22	-15656	intron_retention	FALSE	non_canonical	0	0	junction_6	42603.30334382013	NA	12	NA	TRUE	NA	NA	NA	C	coding	924	2775	492	3266	20.0	4	True	NA	NA
PB.6177.3	chr19	-	3875	7	novel_in_catalog	ZNF432	novel	764	5	NA	NA	-27	-15657	intron_retention	FALSE	canonical	1	13227	junction_6	38176.23467405984	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	461	3235	20.0	-1	True	NA	NA
PB.6177.1	chr19	-	3653	8	novel_not_in_catalog	ZNF432	novel	764	5	NA	NA	-23	-14557	intron_retention	TRUE	canonical	0	0	junction_7	49739.92112940252	NA	2	1	TRUE	NA	NA	NA	C	coding	924	2775	425	3199	85.0	3	True	NA	NA
PB.6177.4	chr19	-	2959	7	novel_in_catalog	ZNF432	novel	862	2	NA	NA	-25	-16571	intron_retention	FALSE	canonical	1	13227	junction_6	38176.23467405984	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2499	459	2957	35.0	1	True	TATAAA	-36
PB.6177.5	chr19	-	2868	7	novel_not_in_catalog	ZNF432	novel	862	2	NA	NA	-15	-16592	intron_retention	FALSE	canonical	1	4085	junction_6	41223.88946823054	NA	1	NA	TRUE	NA	NA	NA	C	coding	826	2478	389	2866	35.0	11	True	TATAAA	-15
PB.8552.7	chr3	+	2270	9	full-splice_match	KLHL24	ENST00000454652.6	7380	9	17	5093	-3	-94	multi-exon	FALSE	canonical	1	25453	junction_2	84653.14090451694	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	370	2172	75.0	17	True	TTTAAA	-45
PB.8552.6	chr3	+	3696	7	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	0	1466	combination_of_known_junctions	FALSE	canonical	1	11732	junction_1	79906.12068268334	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	236	2038	20.0	-3	True	AATAAA	-21
PB.8552.5	chr3	+	3713	8	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	0	1466	combination_of_known_junctions	FALSE	canonical	1	14880	junction_1	75993.43103136196	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	253	2055	20.0	-3	True	AATAAA	-21
PB.8552.4	chr3	+	4215	8	full-splice_match	KLHL24	ENST00000242810.10	2345	8	52	-1922	0	1922	multi-exon	FALSE	canonical	1	58526	junction_1	63009.553486202494	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	299	2101	30.0	-3	True	CATAAA	-19
PB.8552.3	chr3	+	3114	8	full-splice_match	KLHL24	ENST00000242810.10	2345	8	49	-818	-2	818	multi-exon	FALSE	canonical	1	58526	junction_1	63009.553486202494	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	302	2104	75.0	-6	True	NA	NA
PB.8552.2	chr3	+	2263	8	full-splice_match	KLHL24	ENST00000242810.10	2345	8	72	10	-3	-10	multi-exon	FALSE	canonical	1	58526	junction_1	63009.553486202494	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	279	2081	50.0	17	True	AATAAA	-17
PB.8552.1	chr3	+	3087	8	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	-16	814	combination_of_known_junctions	FALSE	canonical	1	14880	junction_1	75993.43103136196	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	279	2081	80.0	-1180	False	NA	NA
PB.11577.1	chr9	+	1967	2	antisense	novelGene_CR786580.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	9	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-9990	False	NA	NA
PB.11577.3	chr9	+	3268	1	antisense	novelGene_DUX4L50_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-7670	False	NA	NA
PB.11577.2	chr9	+	2974	2	intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	45	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-9190	False	NA	NA
PB.8552.9	chr3	+	3758	8	full-splice_match	KLHL24	ENST00000242810.10	2345	8	53	-1466	1	1466	multi-exon	FALSE	canonical	1	58526	junction_1	63009.553486202494	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	298	2100	20.0	-2	True	AATAAA	-21
PB.8552.8	chr3	+	3849	9	full-splice_match	KLHL24	ENST00000454652.6	7380	9	-2	3533	1	1466	multi-exon	FALSE	canonical	1	25453	junction_2	84653.14090451694	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	389	2191	20.0	-2	True	AATAAA	-21
PB.6664.1	chr2	+	2207	1	incomplete-splice_match	MAP4K4	ENST00000350878.8	7640	31	194779	1	24626	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	173	522	340	861	20.0	-2123	False	AATAAA	-15
PB.164.2	chr1	+	4789	11	full-splice_match	ELOA	ENST00000613537.4	4924	11	115	20	9	-20	multi-exon	FALSE	canonical	1	227724	junction_1	87945.12800013427	NA	3	NA	TRUE	NA	NA	NA	C	coding	772	2319	24	2342	45.0	10	True	NA	NA
PB.7224.1	chr20	-	1673	1	intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	101	306	508	813	25.0	NA	False	NA	NA
PB.4503.1	chr16	+	1984	17	full-splice_match	DUS2	ENST00000565263.5	2310	17	328	-2	0	2	multi-exon	FALSE	canonical	1	86636	junction_2	45148.42464370815	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	221	1648	10.0	-1	True	CATAAA	-3
PB.4503.2	chr16	+	1899	16	full-splice_match	DUS2	ENST00000358896.10	1933	16	31	3	0	2	multi-exon	FALSE	canonical	1	32649	junction_1	52244.20893815251	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	141	1568	15.0	-1	True	NA	NA
PB.6167.3	chr19	-	2205	7	incomplete-splice_match	VSIG10L	ENST00000335624.4	3397	10	1952	-124	-417	124	5prime_fragment	FALSE	canonical	1	13	junction_1	26625.516669478297	NA	1	1	TRUE	NA	NA	NA	A	coding	38	117	1172	1288	20.0	2028	False	NA	NA
PB.3714.1	chr14	-	4441	2	novel_not_in_catalog	IGHV4-34	novel	400	2	NA	NA	-24989	3813	any annotated donor/acceptor	FALSE	canonical	1	6848	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	122	369	314	682	50.0	-9218	False	ATTAAA	-20
PB.9598.1	chr5	+	1442	8	full-splice_match	TTC1	ENST00000231238.9	1467	8	24	1	24	-1	multi-exon	FALSE	canonical	1	568303	junction_1	161834.70942884398	NA	0	NA	TRUE	NA	NA	NA	A	coding	292	879	87	965	15.0	-18	True	AATAAA	-15
PB.11538.18	chr9	+	3245	19	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	5470	junction_2	116295.57509077653	NA	2	NA	TRUE	NA	NA	NA	C	coding	651	1956	951	2906	25.0	-2	True	AATAAA	-11
PB.10712.10	chr7	+	6534	6	full-splice_match	ZKSCAN1	ENST00000324306.10	9418	6	26	2858	8	-2857	multi-exon	FALSE	canonical	1	181452	junction_1	50290.442326151795	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	212	1900	70.0	4	True	NA	NA
PB.5670.12	chr19	+	2604	11	full-splice_match	MAP2K7	ENST00000397979.3	3361	11	21	736	5	-717	multi-exon	FALSE	canonical	1	104610	junction_1	94278.74365221463	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	34	1293	80.0	-4	True	NA	NA
PB.7996.6	chr3	+	3003	2	incomplete-splice_match	GPD1L	ENST00000474846.5	3776	3	1231	0	808	0	5prime_fragment	FALSE	canonical	1	194153	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	35	349	25.0	NA	False	AATAAA	-14
PB.1524.4	chr10	+	3396	2	full-splice_match	IFIT2	ENST00000371826.3	3489	2	92	1	1	-1	multi-exon	FALSE	canonical	1	365854	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	78	1496	25.0	1	True	AATAAA	-19
PB.1524.3	chr10	+	3031	2	full-splice_match	IFIT2	ENST00000371826.3	3489	2	93	365	2	-8	multi-exon	FALSE	canonical	1	365854	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	472	1419	77	1495	50.0	2	True	AATAAA	-13
PB.1524.2	chr10	+	1282	2	full-splice_match	IFIT2	ENST00000371826.3	3489	2	91	2116	0	-1740	multi-exon	FALSE	canonical	1	365854	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1203	79	1281	55.0	0	True	NA	NA
PB.1524.1	chr10	+	3010	1	novel_in_catalog	IFIT2	novel	3703	5	NA	NA	30	-3906	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-6348	False	AATAAA	-6
PB.10627.5	chr7	-	2796	3	novel_not_in_catalog	YWHAG	novel	3750	2	NA	NA	44	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	757996.5	NA	3	NA	TRUE	NA	NA	NA	B	coding	120	363	180	542	15.0	1	True	AATAAA	-18
PB.10627.8	chr7	-	3546	3	novel_not_in_catalog	YWHAG	novel	3750	2	NA	NA	44	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	757996.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	225	678	92	769	15.0	1	True	AATAAA	-13
PB.5670.10	chr19	+	2786	11	novel_in_catalog	MAP2K7	novel	3430	11	NA	NA	-2	-717	intron_retention	FALSE	canonical	1	16706	junction_8	147841.50662462827	NA	2	NA	TRUE	NA	NA	NA	C	coding	472	1419	57	1475	80.0	12	True	NA	NA
PB.11779.3	chr9	-	4884	22	full-splice_match	DENND1A	ENST00000373624.6	5010	22	120	6	120	-6	multi-exon	FALSE	canonical	1	96620	junction_2	58297.98471264298	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	83	3112	20.0	-1	True	AATAAA	-13
PB.10776.5	chr7	+	2969	12	novel_not_in_catalog	HBP1	novel	2704	11	NA	NA	3	-8	any annotated donor/acceptor	FALSE	canonical	1	810	junction_2	223162.52851451506	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	170	1879	20.0	0	True	AATAAA	-19
PB.7411.1	chr20	+	2835	6	novel_not_in_catalog	BIRC7	novel	1302	7	NA	NA	22	-6	intron_retention	FALSE	canonical	1	422	junction_1	9837.409528935957	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	830	1342	25.0	-28	True	AATAAA	-27
PB.7411.2	chr20	+	2953	5	novel_in_catalog	BIRC7	novel	1302	7	NA	NA	-12	4	intron_retention	FALSE	canonical	1	16968	junction_4	3817.8995779747797	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	950	1462	20.0	-193	False	AATAAA	-25
PB.7411.3	chr20	+	2685	7	novel_not_in_catalog	BIRC7	novel	1302	7	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	422	junction_1	11279.908605076944	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	846	1358	20.0	0	True	AATAAA	-32
PB.7411.4	chr20	+	2800	6	novel_in_catalog	BIRC7	novel	1302	7	NA	NA	8	-5	intron_retention	FALSE	canonical	1	8423	junction_4	6925.7003862425345	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	930	1442	20.0	2	True	AATAAA	-16
PB.12164.1	chrX	-	6283	41	novel_not_in_catalog	BRWD3	novel	11381	41	NA	NA	119	1423	any annotated donor/acceptor	TRUE	canonical	1	7070	junction_2	32391.148558277077	NA	6	1	TRUE	NA	NA	NA	B	coding	1800	5403	94	5496	35.0	311	False	ATTAAA	-42
PB.12164.2	chrX	-	3555	24	incomplete-splice_match	BRWD3	ENST00000373275.4	11381	41	90033	5732	-85	659	5prime_fragment	FALSE	canonical	1	83151	junction_6	23802.682573795853	NA	0	NA	TRUE	NA	NA	NA	B	coding	1115	3348	185	3532	40.0	NA	False	AATAAA	-13
PB.7411.7	chr20	+	3307	4	novel_in_catalog	BIRC7	novel	1302	7	NA	NA	22	-1	intron_retention	FALSE	canonical	1	16968	junction_3	3923.7371075148358	NA	7	NA	TRUE	NA	NA	NA	C	coding	170	513	916	1428	25.0	-28	True	AATAAA	-20
PB.7411.8	chr20	+	2810	6	novel_not_in_catalog	BIRC7	novel	1302	7	NA	NA	22	-2	intron_retention	FALSE	canonical	1	1372	junction_1	9481.95624541687	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	813	1325	20.0	-28	True	AATAAA	-19
PB.7411.9	chr20	+	2717	7	novel_not_in_catalog	BIRC7	novel	1302	7	NA	NA	22	0	any annotated donor/acceptor	FALSE	canonical	1	422	junction_1	9788.447113249827	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	830	1342	20.0	-28	True	AATAAA	-33
PB.209.5	chr1	+	4271	1	full-splice_match	ACTG1P20	ENST00000486001.1	468	1	-3074	-729	-3074	729	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	197	594	2949	3542	80.0	-11	True	AATAAA	-16
PB.10776.9	chr7	+	2552	9	incomplete-splice_match	HBP1	ENST00000222574.8	2829	11	-12	5409	3	-2	3prime_fragment	FALSE	canonical	1	94403	junction_1	173346.97467178185	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	199	1587	10.0	0	True	AATAAA	-20
PB.10776.8	chr7	+	2674	11	full-splice_match	HBP1	ENST00000468410.5	2704	11	42	-12	3	-9	multi-exon	FALSE	canonical	1	61873	junction_1	169584.7372680985	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	11	1585	20.0	0	True	AATAAA	-18
PB.7572.1	chr21	-	2573	5	novel_not_in_catalog	SPATC1L	novel	1182	4	NA	NA	0	5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	105406.70357002917	NA	0	NA	TRUE	NA	NA	NA	A	coding	340	1023	1328	2350	5.0	-3	True	NA	NA
PB.8564.2	chr3	+	2288	6	full-splice_match	FAM131A	ENST00000340957.9	2421	6	133	0	125	0	multi-exon	FALSE	canonical	1	42358	junction_2	82768.37342270295	NA	2	1	TRUE	NA	NA	NA	C	coding	281	846	140	985	25.0	-4270	False	ATTAAA	-27
PB.9900.2	chr6	+	1130	5	full-splice_match	HLA-DRA	ENST00000395388.6	1280	5	45	105	9	-105	multi-exon	FALSE	canonical	1	8476612	junction_1	669097.3089101091	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	65	829	20.0	0	True	AATAAA	-23
PB.8564.4	chr3	+	2369	5	novel_in_catalog	FAM131A	novel	1335	7	NA	NA	0	1	intron_retention	FALSE	canonical	1	9755	junction_1	92311.82795828495	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	220	1065	30.0	0	True	ATTAAA	-28
PB.11779.7	chr9	-	3300	13	novel_not_in_catalog	DENND1A	novel	4800	18	NA	NA	114	2290	any annotated donor/acceptor	FALSE	canonical	1	128	junction_1	82747.2825433292	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	89	1009	25.0	-7	True	ATTAAA	-15
PB.3283.3	chr14	-	4726	1	novel_in_catalog	DUXAP10	novel	1330	8	NA	NA	-8981	-1480	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	210	633	2340	2972	75.0	NA	False	NA	NA
PB.11779.6	chr9	-	1985	21	full-splice_match	DENND1A	ENST00000373620.7	3612	21	136	1491	117	-42	multi-exon	FALSE	canonical	1	111041	junction_20	52558.29520912945	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	86	1765	15.0	-4	True	AATAAA	-17
PB.4121.1	chr16	+	1036	4	full-splice_match	MPG	ENST00000356432.7	1205	4	158	11	-23	0	multi-exon	FALSE	canonical	1	602185	junction_1	163079.10191887454	NA	0	NA	TRUE	NA	NA	NA	A	coding	293	882	90	971	35.0	-7	True	AATAAA	-15
PB.9900.4	chr6	+	1227	5	full-splice_match	HLA-DRA	ENST00000395388.6	1280	5	51	2	15	-2	multi-exon	FALSE	canonical	1	8476612	junction_1	669097.3089101091	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	59	823	25.0	6	True	AATAAA	-23
PB.11538.12	chr9	+	2659	18	novel_in_catalog	MELK	novel	2485	18	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	36633	junction_1	99396.97576174697	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	360	2315	10.0	-19	True	AATAAA	-16
PB.209.4	chr1	+	1657	7	full-splice_match	TMEM222	ENST00000464720.5	1665	7	7	1	0	0	multi-exon	FALSE	canonical	1	50936	junction_2	216730.78516881002	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	386	724	10.0	-12	True	AATAAA	-14
PB.5547.1	chr19	+	2502	5	full-splice_match	FSTL3	ENST00000166139.8	2542	5	26	14	26	-7	multi-exon	FALSE	canonical	1	179598	junction_1	65216.70016328256	NA	2	NA	TRUE	NA	NA	NA	C	coding	263	792	34	825	10.0	-2	True	AATAAA	-8
PB.11680.3	chr9	-	2274	12	full-splice_match	CORO2A	ENST00000375077.4	5459	12	-36	3221	-36	-3221	multi-exon	FALSE	canonical	1	68641	junction_11	21428.610620090094	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	119	1696	70.0	-41	False	NA	NA
PB.7390.2	chr20	-	2581	1	full-splice_match	PPP1R3D	ENST00000370996.4	3630	1	878	171	878	-171	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	14	45	344	388	40.0	879	False	ATTAAA	-11
PB.7390.3	chr20	-	2274	1	full-splice_match	PPP1R3D	ENST00000370996.4	3630	1	1184	172	1184	-172	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	1185	False	ATTAAA	-10
PB.5077.8	chr17	+	2913	11	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23061	25	intron_retention	FALSE	canonical	1	179310	junction_10	246530.03032022287	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	1809	2654	40.0	-7	True	AATAAA	-6
PB.5077.9	chr17	+	2038	13	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23061	36	intron_retention	FALSE	canonical	1	115911	junction_5	256600.45981739784	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	923	1768	20.0	-7	True	AATAAA	-17
PB.5077.6	chr17	+	2540	13	full-splice_match	CDK5RAP3	ENST00000585163.5	2519	13	-16	-5	-4	0	multi-exon	FALSE	canonical	1	179310	junction_12	239600.9995862769	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	1010	2269	20.0	-13	True	AATAAA	-18
PB.5077.7	chr17	+	3034	11	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23059	40	intron_retention	FALSE	canonical	1	179310	junction_10	227986.68165489403	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	1915	2760	25.0	-9	True	AATAAA	-21
PB.5077.4	chr17	+	1762	15	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23000	41	no_combination_of_known_junctions	FALSE	canonical	1	25716	junction_14	275902.45089575724	NA	3	NA	TRUE	NA	NA	NA	B	coding	541	1626	94	1719	25.0	-9999	False	AATAAA	-22
PB.5077.5	chr17	+	2790	12	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23070	44	intron_retention	FALSE	canonical	1	83157	junction_3	261722.40540565553	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	1667	2512	20.0	2	True	AATAAA	-25
PB.5077.2	chr17	+	3542	11	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	22973	44	intron_retention	FALSE	canonical	1	179310	junction_10	246497.7964072093	NA	5	NA	TRUE	NA	NA	NA	B	coding	149	450	2815	3264	20.0	11	True	AATAAA	-25
PB.5077.3	chr17	+	2740	12	full-splice_match	CDK5RAP3	ENST00000584063.5	2759	12	18	1	0	-1	multi-exon	FALSE	canonical	1	179310	junction_11	235062.4246324072	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	1626	2471	20.0	0	True	AATAAA	-16
PB.5077.1	chr17	+	1824	14	full-splice_match	CDK5RAP3	ENST00000338399.8	1866	14	72	-30	0	-1	multi-exon	FALSE	canonical	1	115911	junction_5	256104.5983485155	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	35	1555	20.0	-9	True	AATAAA	-16
PB.10637.1	chr7	+	2035	8	full-splice_match	GNAI1	ENST00000649796.1	10126	8	51	8040	-11	4	multi-exon	FALSE	canonical	1	263896	junction_1	69511.91544253255	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	323	1387	35.0	-11	True	AATACA	-23
PB.10637.3	chr7	+	3050	8	full-splice_match	GNAI1	ENST00000649796.1	10126	8	298	6778	7	15	multi-exon	FALSE	canonical	1	263896	junction_1	69511.91544253255	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	76	1140	40.0	-30	True	AATAAA	-30
PB.10637.2	chr7	+	1959	8	full-splice_match	GNAI1	ENST00000649796.1	10126	8	43	8124	-19	8	multi-exon	FALSE	canonical	1	263896	junction_1	69511.91544253255	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	331	1395	30.0	-19	True	AATAAA	-36
PB.11680.4	chr9	-	2005	12	full-splice_match	CORO2A	ENST00000375077.4	5459	12	-31	3485	-31	-3485	multi-exon	FALSE	canonical	1	68641	junction_11	21428.610620090094	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	114	1691	15.0	-36	False	NA	NA
PB.6604.13	chr2	+	2320	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	46	4368	2	908	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	21	2090	30.0	-7	True	ATTAAA	-20
PB.6604.12	chr2	+	2955	23	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	2	908	intron_retention	FALSE	canonical	1	5481	junction_14	186476.11572919006	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	21	1184	30.0	-7	True	ATTAAA	-20
PB.6604.11	chr2	+	3131	20	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	2	-3	intron_retention	FALSE	canonical	1	92112	junction_3	156762.91060344686	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	21	1184	30.0	-7	True	AATAAA	-26
PB.6604.10	chr2	+	3613	21	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	2	1312	intron_retention	FALSE	canonical	1	22224	junction_11	175361.47781685123	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	21	941	20.0	-7	True	AATATA	-33
PB.6604.17	chr2	+	3356	23	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	3	901	intron_retention	FALSE	canonical	1	1095	junction_7	188747.69103943763	NA	20	5	TRUE	NA	NA	NA	C	coding	270	813	2321	3133	30.0	-6	True	ATTAAA	-13
PB.6604.16	chr2	+	3370	24	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	3	1320	combination_of_known_junctions	FALSE	canonical	1	8094	junction_17	168254.08429427532	NA	2	NA	TRUE	NA	NA	NA	C	coding	457	1374	20	1393	5.0	-6	True	AATATA	-41
PB.6604.15	chr2	+	3429	24	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	3	1312	intron_retention	FALSE	canonical	1	15073	junction_8	183352.70883301547	NA	2	1	TRUE	NA	NA	NA	C	coding	293	882	1914	2795	20.0	-6	True	AATATA	-33
PB.6604.14	chr2	+	2255	23	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	2	908	any annotated donor/acceptor	FALSE	canonical	1	139	junction_13	175010.7599903881	NA	2	1	TRUE	NA	NA	NA	C	coding	372	1119	21	1139	30.0	-7	True	ATTAAA	-20
PB.1109.4	chr1	+	2482	14	full-splice_match	DTL	ENST00000542077.5	4471	14	179	1810	-114	-1398	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	160	2226	30.0	-61	True	AGTAAA	-20
PB.1109.5	chr1	+	3872	14	full-splice_match	DTL	ENST00000542077.5	4471	14	187	412	-106	0	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	1	NA	TRUE	NA	NA	NA	C	coding	688	2067	152	2218	75.0	-53	True	NA	NA
PB.6604.19	chr2	+	2155	22	incomplete-splice_match	PTCD3	ENST00000254630.11	6734	24	47	5279	3	-3	3prime_fragment	FALSE	canonical	1	92112	junction_3	150361.1690143605	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	20	1843	30.0	-6	True	AATAAA	-26
PB.6604.18	chr2	+	2179	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	47	4508	3	768	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	20	2089	65.0	-6	True	NA	NA
PB.1019.2	chr1	-	8711	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-869	-4	any annotated donor/acceptor	FALSE	canonical	1	55417	junction_10	7391.040160221022	NA	2	NA	TRUE	NA	NA	NA	B	coding	909	2730	307	3036	35.0	-24	True	AATAAA	-20
PB.1109.2	chr1	+	2725	14	full-splice_match	DTL	ENST00000542077.5	4471	14	177	1569	-116	-1157	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	162	2228	0.0	-63	True	AATACA	-16
PB.1109.3	chr1	+	4407	15	full-splice_match	DTL	ENST00000366991.4	4573	15	172	-6	-97	6	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	4	NA	TRUE	NA	NA	NA	C	coding	730	2193	143	2335	30.0	-44	True	AATAAA	-21
PB.6254.1	chr19	-	2371	5	full-splice_match	ZNF154	ENST00000451275.1	2567	5	-10	206	-10	-206	multi-exon	FALSE	canonical	1	12992	junction_1	14281.433637769003	NA	0	NA	TRUE	NA	NA	NA	A	coding	437	1314	234	1547	25.0	-1	True	NA	NA
PB.2614.1	chr12	+	1889	4	full-splice_match	DAZAP2	ENST00000412716.7	2598	4	535	174	0	-25	multi-exon	FALSE	canonical	1	660546	junction_3	759362.5345627447	NA	6	NA	TRUE	NA	NA	NA	C	coding	168	507	82	588	40.0	1	True	AATAAA	-18
PB.2614.2	chr12	+	1678	2	full-splice_match	DAZAP2	ENST00000549041.1	598	2	-15	-1065	-2	-510	multi-exon	FALSE	canonical	1	2110569	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-4	True	NA	NA
PB.2614.3	chr12	+	2328	3	novel_in_catalog	DAZAP2	novel	2598	4	NA	NA	0	4	intron_retention	FALSE	canonical	1	660546	junction_2	725011.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	671	997	25.0	1	True	AATAAA	-24
PB.2614.4	chr12	+	2061	4	full-splice_match	DAZAP2	ENST00000412716.7	2598	4	535	2	0	0	multi-exon	FALSE	canonical	1	660546	junction_3	759362.5345627447	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	82	588	35.0	1	True	AATAAA	-18
PB.10889.1	chr7	+	2282	16	full-splice_match	AGK	ENST00000649286.1	2295	16	1	12	1	-12	multi-exon	FALSE	canonical	1	45669	junction_1	76942.89996256243	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	39	1307	40.0	1	True	NA	NA
PB.1019.3	chr1	-	7250	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-846	-1442	any annotated donor/acceptor	FALSE	canonical	1	55417	junction_10	7391.040160221022	NA	5	NA	TRUE	NA	NA	NA	B	coding	909	2730	284	3013	5.0	-1	True	AATAAA	-18
PB.3110.1	chr13	-	1138	10	full-splice_match	ALG5	ENST00000239891.3	1154	10	5	11	5	8	multi-exon	FALSE	canonical	1	350785	junction_4	107125.3972688083	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	63	1037	15.0	-36	True	AATAAA	-13
PB.3110.2	chr13	-	3602	9	novel_in_catalog	ALG5	novel	1119	9	NA	NA	-11	0	intron_retention	FALSE	canonical	1	350785	junction_3	112495.2415893668	NA	5	1	TRUE	NA	NA	NA	C	coding	310	933	79	1011	5.0	1702	False	AATAAA	-5
PB.6570.1	chr2	+	1554	1	full-splice_match	LBX2-AS1	ENST00000603175.1	2083	1	529	0	529	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-366	False	TATAAA	-12
PB.371.2	chr1	+	2590	3	full-splice_match	UROD	ENST00000463092.5	968	3	62	-1684	1	-2	multi-exon	FALSE	canonical	1	764925	junction_1	229890.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	20	418	20.0	-7	True	AATAAA	-14
PB.8651.1	chr4	-	1831	6	full-splice_match	SPON2	ENST00000290902.9	1869	6	34	4	6	1	multi-exon	FALSE	canonical	1	705795	junction_5	327689.0565371996	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	300	1295	15.0	1	True	AATAAA	-19
PB.3126.3	chr13	-	2972	1	full-splice_match	KBTBD6	ENST00000379485.1	5178	1	-73	2279	-73	-2279	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	674	2025	309	2333	60.0	-21	True	NA	NA
PB.3126.2	chr13	-	3098	1	full-splice_match	KBTBD6	ENST00000379485.1	5178	1	-37	2117	-37	-2117	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	674	2025	273	2297	100.0	15	True	NA	NA
PB.3126.1	chr13	-	5214	1	full-splice_match	KBTBD6	ENST00000379485.1	5178	1	-38	2	-38	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	674	2025	274	2298	20.0	14	True	AATAAA	-12
PB.2622.1	chr12	+	1461	7	full-splice_match	KRT18	ENST00000388835.3	1562	7	110	-9	-53	9	multi-exon	FALSE	canonical	1	1250970	junction_3	577903.68365347	NA	0	NA	TRUE	NA	NA	NA	A	coding	430	1293	101	1393	5.0	-3077	False	AATAAA	-24
PB.6879.2	chr2	+	1489	6	novel_in_catalog	UBE2E3	novel	654	5	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	1	88427	junction_2	213150.51169293496	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	328	951	20.0	1	True	AATAAA	-18
PB.10542.10	chr7	-	3664	5	full-splice_match	FIGNL1	ENST00000448788.1	572	5	-46	-3046	6	-4	multi-exon	FALSE	canonical	1	11057	junction_3	23008.194576878475	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	514	2538	20.0	-33	False	ATTAAA	-15
PB.10542.11	chr7	-	3588	5	full-splice_match	FIGNL1	ENST00000420829.5	582	5	-16	-2990	-2	-5	multi-exon	FALSE	canonical	1	7069	junction_3	24241.250136647242	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	439	2463	20.0	-3	True	ATTAAA	-14
PB.10542.13	chr7	-	3135	4	novel_not_in_catalog	FIGNL1	novel	3471	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	753	junction_2	50776.13900905293	NA	1	1	TRUE	NA	NA	NA	C	coding	674	2025	325	2349	25.0	0	True	NA	NA
PB.10542.14	chr7	-	2504	3	full-splice_match	FIGNL1	ENST00000615084.4	3368	3	31	833	9	180	multi-exon	FALSE	canonical	1	23189	junction_2	50552.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	179	2203	35.0	-10	True	NA	NA
PB.10542.15	chr7	-	2361	3	full-splice_match	FIGNL1	ENST00000615084.4	3368	3	14	993	-8	20	multi-exon	FALSE	canonical	1	23189	junction_2	50552.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	196	2220	35.0	-27	False	AATATA	-45
PB.5977.32	chr19	+	3017	19	novel_in_catalog	ACTN4	novel	1729	12	NA	NA	-7055	-54	combination_of_known_junctions	FALSE	canonical	1	87491	junction_16	1037784.5032259189	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	59	2359	90.0	-8390	False	NA	NA
PB.251.7	chr1	+	4824	10	novel_not_in_catalog	TXLNA	novel	4854	11	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	6407	junction_2	186088.73875979136	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	296	1735	10.0	-55	True	AATAAA	-15
PB.6532.1	chr2	+	1333	1	full-splice_match	PCBP1	ENST00000303577.6	1750	1	371	46	371	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	283	852	139	990	40.0	-597	False	ATTAAA	-13
PB.1132.13	chr1	-	4972	34	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	4	711	any annotated donor/acceptor	FALSE	canonical	1	2221	junction_28	63884.02063779582	NA	0	NA	TRUE	NA	NA	NA	C	coding	1359	4080	114	4193	100.0	-21	True	NA	NA
PB.1116.5	chr1	+	4377	10	novel_not_in_catalog	VASH2	novel	1369	9	NA	NA	-6	-3	intron_retention	FALSE	canonical	1	23	junction_3	27341.04349160574	NA	9	1	TRUE	NA	NA	NA	C	coding	251	756	624	1379	20.0	-6	True	AATAAA	-16
PB.7189.2	chr20	+	2494	6	full-splice_match	ZNF133	ENST00000396026.7	2717	6	222	1	0	-1	multi-exon	FALSE	canonical	1	3973	junction_2	34307.01435333597	NA	1	1	TRUE	NA	NA	NA	C	coding	653	1962	356	2317	10.0	-7416	False	AATAAA	-22
PB.11463.6	chr9	+	2188	10	full-splice_match	SNAPC3	ENST00000490969.5	2524	10	0	336	0	-336	multi-exon	FALSE	canonical	1	214016	junction_9	70752.56112050722	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	12	1247	35.0	-7	True	AAAAAG	-2
PB.2338.1	chr11	+	4206	1	novel_in_catalog	GRAMD1B	novel	3849	21	NA	NA	10435	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	ATTAAA	-22
PB.5737.1	chr19	+	3772	3	novel_in_catalog	ZNF788P	novel	566	2	NA	NA	-7	1627	combination_of_known_junctions	FALSE	canonical	1	29142	junction_2	1845.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	539	1620	873	2492	25.0	-7	True	AAAAAG	-12
PB.5737.3	chr19	+	2938	3	novel_in_catalog	ZNF788P	novel	566	2	NA	NA	0	800	combination_of_known_junctions	FALSE	canonical	1	29142	junction_2	1845.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	539	1620	866	2485	30.0	0	True	ATTAAA	-25
PB.5737.2	chr19	+	3534	3	novel_in_catalog	ZNF788P	novel	566	2	NA	NA	-6	1390	combination_of_known_junctions	FALSE	canonical	1	29142	junction_2	1845.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	539	1620	872	2491	30.0	-6	True	AGTAAA	-16
PB.2709.3	chr12	+	2636	2	incomplete-splice_match	TSPAN31	ENST00000546993.5	2026	4	1	-16	1	3	intron_retention	FALSE	canonical	1	324110	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	3	341	80.0	-12	True	AAGAAA	-5
PB.2709.2	chr12	+	1683	6	full-splice_match	TSPAN31	ENST00000257910.7	1849	6	155	11	-3	3	multi-exon	FALSE	canonical	1	324110	junction_1	104179.51662203085	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	120	752	80.0	-35	True	AAGAAA	-5
PB.2709.1	chr12	+	1789	5	incomplete-splice_match	TSPAN31	ENST00000257910.7	1849	6	133	11	-9	3	intron_retention	FALSE	canonical	1	324110	junction_1	106749.70348085281	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	142	750	80.0	-10010	False	AAGAAA	-5
PB.3554.1	chr14	+	3110	12	full-splice_match	BBOF1	ENST00000394009.4	3106	12	-6	2	-3	-2	multi-exon	FALSE	canonical	1	10218	junction_1	21331.20750031483	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	130	1719	25.0	1	True	AATAAA	-13
PB.3554.2	chr14	+	2866	11	novel_not_in_catalog	BBOF1	novel	689	6	NA	NA	16	-2	intron_retention	FALSE	canonical	1	2611	junction_10	22896.050576464055	NA	1	1	TRUE	NA	NA	NA	C	coding	421	1266	299	1564	25.0	-8041	False	AATAAA	-13
PB.5566.6	chr19	+	2727	15	novel_in_catalog	MUM1	novel	522	3	NA	NA	3	30	combination_of_known_junctions	FALSE	canonical	1	38865	junction_5	95793.22805932323	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	428	2356	25.0	21	True	ATTAAA	-12
PB.8547.13	chr3	-	3824	1	novel_in_catalog	LAMP3	novel	3375	6	NA	NA	148	-798	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.8547.12	chr3	-	1899	3	incomplete-splice_match	LAMP3	ENST00000265598.7	3375	6	175	29232	146	2456	3prime_fragment	FALSE	canonical	1	69476	junction_2	40897.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	82	1065	100.0	-3	True	NA	NA
PB.6618.1	chr2	-	3523	3	novel_in_catalog	AC006453.2	novel	1196	3	NA	NA	-5	2806	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	74	225	126	350	35.0	NA	False	ATTAAA	-17
PB.3174.3	chr13	+	3725	1	novel_in_catalog	RNASEH2B	novel	1629	11	NA	NA	-4	-13964	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-27	True	NA	NA
PB.6325.5	chr2	+	3911	24	novel_in_catalog	DDX1	novel	2817	27	NA	NA	17	0	intron_retention	FALSE	canonical	1	819723	junction_1	279669.91793882527	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	67	1770	20.0	0	True	AATAAA	-22
PB.6325.4	chr2	+	2554	27	novel_not_in_catalog	DDX1	novel	2817	27	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	1	581	junction_1	421176.7870793179	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	156	2351	20.0	-2	True	AATAAA	-22
PB.6325.7	chr2	+	1748	20	incomplete-splice_match	DDX1	ENST00000233084.7	2739	26	248	3967	18	-415	3prime_fragment	FALSE	canonical	1	819723	junction_1	189416.92410687808	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1683	66	1748	35.0	1	True	NA	NA
PB.6325.6	chr2	+	2438	26	novel_not_in_catalog	DDX1	novel	2817	27	NA	NA	17	0	any annotated donor/acceptor	FALSE	canonical	1	8062	junction_24	321725.83011738426	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	67	2244	20.0	0	True	AATAAA	-13
PB.6325.1	chr2	+	2450	26	full-splice_match	DDX1	ENST00000233084.7	2739	26	280	9	50	0	multi-exon	FALSE	canonical	1	819723	junction_1	269760.67011828395	NA	13	1	TRUE	NA	NA	NA	C	coding	740	2223	34	2256	20.0	33	True	AATAAA	-13
PB.10882.9	chr7	-	4219	4	incomplete-splice_match	PARP12	ENST00000473341.5	2861	11	-19	27661	-19	5997	3prime_fragment	FALSE	canonical	1	120454	junction_3	34654.24082113023	NA	2	NA	TRUE	NA	NA	NA	C	coding	301	906	106	1011	95.0	-42	True	NA	NA
PB.6325.3	chr2	+	2300	23	novel_in_catalog	DDX1	novel	2817	27	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	8889	junction_20	362145.8803894411	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	74	2107	20.0	-7	True	AATAAA	-12
PB.6325.2	chr2	+	2638	25	novel_in_catalog	DDX1	novel	2817	27	NA	NA	-9	0	intron_retention	FALSE	canonical	1	819723	junction_1	273811.43689990876	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	93	1883	20.0	-8841	False	AATAAA	-22
PB.10882.8	chr7	-	2298	12	full-splice_match	PARP12	ENST00000263549.7	3796	12	816	682	28	108	multi-exon	FALSE	canonical	1	120454	junction_11	46147.71945996218	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	59	2164	35.0	5	True	AATGAA	-42
PB.6325.9	chr2	+	2416	25	novel_in_catalog	DDX1	novel	2817	27	NA	NA	23	0	no_combination_of_known_junctions	FALSE	canonical	1	9030	junction_13	365788.01161536283	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	1158	2222	20.0	6	True	AATAAA	-13
PB.6325.8	chr2	+	2447	26	novel_not_in_catalog	DDX1	novel	2817	27	NA	NA	20	0	any annotated donor/acceptor	FALSE	canonical	1	2254	junction_18	363292.57890682877	NA	1	NA	TRUE	NA	NA	NA	C	coding	729	2190	64	2253	20.0	3	True	AATAAA	-13
PB.3112.43	chr13	-	2688	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	9	0	intron_retention	FALSE	canonical	1	59174	junction_4	140871.28187302905	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	213	2516	30.0	10	True	AATAAA	-17
PB.3112.42	chr13	-	2728	25	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_24	159541.13260378968	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	357	2519	30.0	28	True	AATAAA	-17
PB.3112.41	chr13	-	2755	26	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_25	158934.08832896737	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	384	2546	30.0	1	True	AATAAA	-17
PB.3112.40	chr13	-	2839	25	full-splice_match	SUPT20H	ENST00000475892.5	2836	25	-10	7	-9	0	multi-exon	FALSE	canonical	1	66551	junction_6	124619.48064296458	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	195	2630	30.0	28	True	AATAAA	-17
PB.3112.47	chr13	-	2111	20	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-9	-496	combination_of_known_junctions	FALSE	canonical	1	92571	junction_1	131715.7144712233	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	195	1799	45.0	28	True	ATTAAA	-20
PB.3112.46	chr13	-	2415	20	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	9	-210	combination_of_known_junctions	FALSE	canonical	1	92571	junction_1	131715.7144712233	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	213	1817	80.0	10	True	NA	NA
PB.3112.45	chr13	-	2544	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	7	12	intron_retention	FALSE	canonical	1	155906	junction_6	116660.84159022654	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	242	2440	15.0	10	False	TTTAAA	-37
PB.3112.44	chr13	-	2707	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-10	0	intron_retention	FALSE	canonical	1	75878	junction_23	140411.6581362934	NA	2	NA	TRUE	NA	NA	NA	C	coding	767	2304	232	2535	30.0	-9	True	AATAAA	-17
PB.6560.2	chr2	-	4867	6	novel_not_in_catalog	MOB1A	novel	4885	6	NA	NA	-5	-72	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	481816.4690377447	NA	22	1	TRUE	NA	NA	NA	C	coding	171	516	384	899	50.0	-6	True	AATAAA	-14
PB.3112.49	chr13	-	2408	20	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	-11	-27	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	158741.50234636202	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	359	1960	65.0	26	True	AATAAA	-3
PB.3112.48	chr13	-	2282	19	incomplete-splice_match	SUPT20H	ENST00000350612.10	2739	26	4	14067	4	-12	3prime_fragment	FALSE	canonical	1	181738	junction_18	118747.00281831679	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	218	1819	40.0	5	True	AATAAA	-18
PB.10290.2	chr6	-	2956	7	full-splice_match	MTRF1L	ENST00000464135.5	3651	7	-16	711	-16	-711	multi-exon	FALSE	canonical	1	1972	junction_5	8503.132651493148	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	418	1134	15.0	-13	True	NA	NA
PB.21.3	chr1	+	4021	16	novel_not_in_catalog	ATAD3B	novel	2448	16	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	152054.4776500259	NA	15	2	TRUE	NA	NA	NA	C	coding	437	1314	1264	2577	10.0	-5	True	AATAAA	-17
PB.6560.3	chr2	-	4681	5	novel_in_catalog	MOB1A	novel	4885	6	NA	NA	-2	-72	no_combination_of_known_junctions	FALSE	canonical	1	19904	junction_1	459668.7445571539	NA	3	NA	TRUE	NA	NA	NA	C	coding	138	417	227	643	50.0	-22	True	AATAAA	-14
PB.7037.4	chr2	+	2727	16	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-16	-2	no_combination_of_known_junctions	FALSE	canonical	1	9534	junction_1	313627.2601518064	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	430	2559	10.0	-26	True	AGTAAA	-15
PB.7037.5	chr2	+	1533	9	incomplete-splice_match	ACSL3	ENST00000357430.7	5679	17	78	21808	-14	1478	3prime_fragment	FALSE	canonical	1	231016	junction_3	245082.4513143485	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1047	487	1533	20.0	-24	True	NA	NA
PB.7037.6	chr2	+	2428	14	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	1	4374	junction_10	327857.1948834615	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	380	1651	15.0	-24	True	AGTAAA	-14
PB.3562.4	chr14	+	1764	9	novel_not_in_catalog	FCF1	novel	574	6	NA	NA	-6	1378	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	142753.70644224968	NA	2	NA	TRUE	NA	NA	NA	B	coding	108	327	460	786	40.0	28	True	NA	NA
PB.3562.3	chr14	+	1709	9	novel_not_in_catalog	FCF1	novel	574	6	NA	NA	-4	1405	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	145958.90191741474	NA	0	NA	TRUE	NA	NA	NA	B	coding	108	327	373	699	40.0	-6	True	NA	NA
PB.3562.2	chr14	+	1814	10	novel_not_in_catalog	FCF1	novel	574	6	NA	NA	1	1412	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	139184.26315029783	NA	9	2	TRUE	NA	NA	NA	B	coding	186	561	90	650	25.0	-25	True	NA	NA
PB.3562.1	chr14	+	1660	9	novel_not_in_catalog	FCF1	novel	574	6	NA	NA	8	1412	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	128916.96888931796	NA	1	NA	TRUE	NA	NA	NA	B	coding	186	561	83	643	25.0	-18	True	NA	NA
PB.7037.3	chr2	+	3267	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-42	2	any annotated donor/acceptor	FALSE	canonical	1	9822	junction_12	330654.4442186243	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	515	2038	30.0	2	True	AATAAA	-28
PB.1997.1	chr11	+	1918	2	full-splice_match	UQCC3	ENST00000377953.3	1947	2	27	2	27	-2	multi-exon	FALSE	canonical	1	729271	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	93	282	66	347	25.0	8	True	AATAAA	-19
PB.9832.6	chr6	+	1954	4	full-splice_match	HLA-F	ENST00000484704.5	1201	4	-756	3	9	-2	multi-exon	FALSE	canonical	1	944009	junction_3	309946.34235227806	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	808	1500	30.0	0	True	AATAAA	-25
PB.2262.13	chr11	+	2089	1	novel_in_catalog	CUL5	novel	6351	19	NA	NA	-11	-35496	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	441	773	80.0	-10	True	NA	NA
PB.7037.8	chr2	+	5583	17	full-splice_match	ACSL3	ENST00000357430.7	5679	17	79	17	-13	-17	multi-exon	FALSE	canonical	1	231016	junction_3	274418.0201148138	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	486	2615	35.0	-23	True	AATAAA	-16
PB.7037.9	chr2	+	4014	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-12	856	any annotated donor/acceptor	FALSE	canonical	1	16744	junction_5	332624.6354749917	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	485	2590	90.0	-22	True	NA	NA
PB.9278.1	chr5	-	2303	12	novel_not_in_catalog	AC138866.2	novel	584	4	NA	NA	-82502	58328	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	11725.544316604715	NA	0	NA	TRUE	NA	NA	NA	A	coding	210	633	552	1184	75.0	NA	False	NA	NA
PB.10290.5	chr6	-	2613	7	novel_in_catalog	MTRF1L	novel	3214	4	NA	NA	-40	-1173	combination_of_known_junctions	FALSE	canonical	1	1972	junction_5	8217.858434531468	NA	5	NA	TRUE	NA	NA	NA	C	coding	138	417	442	858	95.0	-37	True	NA	NA
PB.8616.34	chr3	-	5168	20	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	-42	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	533376.4340908112	NA	4	NA	TRUE	NA	NA	NA	C	coding	797	2394	120	2513	20.0	-12	False	AATAAA	-13
PB.8616.35	chr3	-	5087	19	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	95	junction_7	450096.3692617996	NA	3	NA	TRUE	NA	NA	NA	C	coding	493	1482	72	1553	20.0	-1	True	AATAAA	-13
PB.4343.1	chr16	+	1663	12	full-splice_match	LAT	ENST00000395456.6	1616	12	-45	-2	2	2	multi-exon	TRUE	canonical	1	159287	junction_4	64922.08520301422	NA	0	NA	TRUE	NA	NA	NA	A	coding	211	636	434	1069	50.0	-1	True	AATAAA	-10
PB.8616.37	chr3	-	3434	19	full-splice_match	TFRC	ENST00000360110.8	5111	19	51	1626	-42	-1434	multi-exon	FALSE	canonical	1	1098325	junction_9	275548.7737711156	NA	1	NA	TRUE	NA	NA	NA	C	coding	759	2280	123	2402	25.0	-12	False	AATAAA	-36
PB.8616.30	chr3	-	6587	17	novel_in_catalog	TFRC	novel	354	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1098325	junction_7	282308.32942900585	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	72	1511	20.0	-1	True	AATAAA	-14
PB.8616.31	chr3	-	5137	18	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	609	junction_16	562647.9902979282	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	574	2481	20.0	-1	True	AATAAA	-14
PB.8616.32	chr3	-	5093	20	novel_not_in_catalog	TFRC	novel	354	3	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	4053	junction_3	532828.7401774059	NA	5	NA	TRUE	NA	NA	NA	C	coding	637	1914	73	1986	20.0	-2	True	AATAAA	-14
PB.8616.38	chr3	-	2873	19	full-splice_match	TFRC	ENST00000392396.7	5032	19	0	2159	0	1857	multi-exon	FALSE	canonical	1	18081	junction_18	445578.0184670418	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	287	2566	20.0	-1	True	AATGAA	-16
PB.8616.39	chr3	-	2659	19	full-splice_match	TFRC	ENST00000360110.8	5111	19	99	2353	0	1855	multi-exon	FALSE	canonical	1	1098325	junction_9	275548.7737711156	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	75	2354	25.0	-1	True	AATGAA	-14
PB.5408.4	chr18	+	1896	1	full-splice_match	LDLRAD4	ENST00000590308.1	3720	1	595	1229	-1	-1229	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	AATAAA	-19
PB.4123.16	chr16	-	2592	9	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	3	372	intron_retention	FALSE	canonical	1	113103	junction_8	240622.69781275312	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1334	2152	30.0	-32	True	NA	NA
PB.5408.1	chr18	+	3133	1	full-splice_match	LDLRAD4	ENST00000590308.1	3720	1	592	-5	2	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	108	327	2775	3101	20.0	-2	True	ATTAAA	-18
PB.5408.2	chr18	+	1914	3	full-splice_match	LDLRAD4	ENST00000586765.1	844	3	3	-1073	3	-2	multi-exon	FALSE	canonical	1	22357	junction_2	11435.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	84	839	25.0	-1	True	AATAAA	-14
PB.5408.3	chr18	+	1967	4	full-splice_match	LDLRAD4	ENST00000587757.5	2171	4	1159	-955	-2	-2	multi-exon	FALSE	canonical	1	45227	junction_1	16798.460306428882	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	83	892	25.0	0	True	AATAAA	-14
PB.11210.1	chr8	+	1868	5	full-splice_match	CHMP4C	ENST00000297265.4	1866	5	-8	6	-8	-6	multi-exon	FALSE	canonical	1	114373	junction_1	12339.658248407855	NA	1	NA	TRUE	NA	NA	NA	A	coding	233	702	202	903	30.0	-89	False	ATTAAA	-13
PB.4609.1	chr16	-	2340	14	full-splice_match	GALNS	ENST00000268695.9	2363	14	21	2	-14	0	multi-exon	FALSE	canonical	1	83874	junction_13	38379.96113666702	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	69	1637	10.0	-3	True	NA	NA
PB.4609.2	chr16	-	2239	13	novel_in_catalog	GALNS	novel	2363	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	23216	junction_12	53398.30099272562	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	524	1537	10.0	-27	True	NA	NA
PB.3472.11	chr14	-	2300	6	novel_not_in_catalog	L3HYPDH	novel	462	3	NA	NA	-81	0	any annotated donor/acceptor	FALSE	canonical	1	1275	junction_1	118211.92628055767	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	414	914	35.0	320	False	AATAAA	-16
PB.3472.10	chr14	-	2017	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	-26	-5	combination_of_known_junctions	FALSE	canonical	1	23052	junction_1	104729.05855438356	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	23	730	35.0	-1	True	AATAAA	-9
PB.3472.13	chr14	-	2709	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	18058	junction_4	123011.61894588453	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	916	1416	30.0	8	True	AATAAA	-15
PB.3472.15	chr14	-	1937	4	full-splice_match	L3HYPDH	ENST00000481608.1	758	4	-402	-777	0	-638	multi-exon	FALSE	canonical	1	84705	junction_3	86694.51796970787	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	735	1235	35.0	-1	True	AATAAA	-21
PB.3472.14	chr14	-	2535	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	1	23052	junction_1	108703.03243010289	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	742	1242	30.0	-8	True	AATAAA	-15
PB.3472.16	chr14	-	1794	4	incomplete-splice_match	L3HYPDH	ENST00000247194.8	1527	5	30	2481	8	-644	3prime_fragment	FALSE	canonical	1	110938	junction_3	74647.18612394056	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	85	1098	45.0	7	True	AATAAA	-15
PB.365.1	chr1	+	2789	21	full-splice_match	KIF2C	ENST00000372224.8	2879	21	45	45	40	-45	multi-exon	FALSE	canonical	1	274640	junction_5	78617.84764814858	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	75	2246	75.0	3	True	NA	NA
PB.9361.1	chr5	+	1644	1	genic	LINC02062	novel	NA	NA	NA	NA	-2	-64201	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-20
PB.4123.15	chr16	-	2658	10	novel_in_catalog	LUC7L	novel	2737	10	NA	NA	1	372	intron_retention	FALSE	canonical	1	84829	junction_7	297860.04925459647	NA	1	1	TRUE	NA	NA	NA	C	coding	239	720	1499	2218	30.0	-34	True	NA	NA
PB.3449.2	chr14	-	2751	6	novel_not_in_catalog	GCH1	novel	2923	6	NA	NA	229	0	intron_retention	FALSE	canonical	1	1666	junction_5	70634.11167983923	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	382	750	15.0	7	True	ATTAAA	-15
PB.3449.1	chr14	-	2925	6	full-splice_match	GCH1	ENST00000622544.4	2923	6	-2	0	-2	0	multi-exon	FALSE	canonical	1	127955	junction_5	23752.747819147156	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	164	916	25.0	-1	True	ATTAAA	-23
PB.3449.6	chr14	-	2460	6	novel_not_in_catalog	GCH1	novel	2923	6	NA	NA	21162	-1	intron_retention	FALSE	canonical	1	3775	junction_5	69809.58466113375	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	93	461	15.0	2085	False	ATTAAA	-13
PB.3449.5	chr14	-	2969	6	novel_not_in_catalog	GCH1	novel	2923	6	NA	NA	216	0	intron_retention	FALSE	canonical	1	1619	junction_5	70652.49175959754	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	601	969	15.0	595	False	ATTAAA	-14
PB.3449.4	chr14	-	1969	7	novel_not_in_catalog	GCH1	novel	2923	6	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	3505	junction_1	63984.97818759233	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	164	916	15.0	-1	True	ATTAAA	-15
PB.1306.5	chr10	+	5183	4	incomplete-splice_match	HSPA14	ENST00000640019.2	4819	5	140	20	4	0	intron_retention	FALSE	canonical	1	88059	junction_3	147225.06082940576	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	470	1090	20.0	-10	True	AATAAA	-17
PB.1306.4	chr10	+	2413	5	full-splice_match	HSPA14	ENST00000640019.2	4819	5	135	2271	-1	10	multi-exon	FALSE	canonical	1	88059	junction_3	138584.84501380372	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	475	1560	20.0	-15	True	ATTAAA	-24
PB.1306.6	chr10	+	3943	4	full-splice_match	HSPA14	ENST00000437161.7	4092	4	148	1	6	-1	multi-exon	FALSE	canonical	1	25344	junction_3	173862.92908367657	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	96	527	15.0	-8	True	AATAAA	-16
PB.1306.1	chr10	+	4649	5	full-splice_match	HSPA14	ENST00000640019.2	4819	5	150	20	14	0	multi-exon	FALSE	canonical	1	88059	junction_3	138584.84501380372	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	460	1545	20.0	0	True	AATAAA	-17
PB.2800.8	chr12	-	969	2	full-splice_match	BTG1	ENST00000256015.4	4680	2	44	3667	44	173	multi-exon	FALSE	canonical	1	1630082	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	319	834	80.0	-8	True	TTTAAA	-42
PB.1306.3	chr10	+	1506	13	incomplete-splice_match	HSPA14	ENST00000378372.7	1904	14	134	1124	-4	-1124	3prime_fragment	TRUE	canonical	1	188926	junction_6	76150.39578616049	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1401	106	1506	60.0	-18	True	TATAAA	-25
PB.1306.2	chr10	+	1760	14	full-splice_match	HSPA14	ENST00000378372.7	1904	14	142	2	4	-2	multi-exon	FALSE	canonical	1	188926	junction_6	74461.96047281876	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	98	1627	20.0	-10	True	ATTAAA	-16
PB.2800.5	chr12	-	2720	1	novel_in_catalog	BTG1	novel	4680	2	NA	NA	50	990	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	134	405	313	717	30.0	-2	True	AATAAA	-22
PB.2800.4	chr12	-	1781	2	full-splice_match	BTG1	ENST00000256015.4	4680	2	49	2850	49	990	multi-exon	FALSE	canonical	1	1630082	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	314	829	30.0	-3	True	AATAAA	-22
PB.2800.7	chr12	-	1553	2	full-splice_match	BTG1	ENST00000256015.4	4680	2	49	3078	49	762	multi-exon	FALSE	canonical	1	1630082	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	314	829	15.0	-3	True	AGTAAA	-21
PB.2800.6	chr12	-	2109	2	full-splice_match	BTG1	ENST00000552315.1	504	2	-615	-990	49	990	multi-exon	FALSE	canonical	1	7138	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	314	718	30.0	-3	True	AATAAA	-22
PB.2800.1	chr12	-	5553	1	novel_in_catalog	BTG1	novel	4680	2	NA	NA	47	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	134	405	316	720	60.0	-5	True	NA	NA
PB.251.9	chr1	+	2165	11	novel_not_in_catalog	TXLNA	novel	4854	11	NA	NA	0	-1764	any annotated donor/acceptor	FALSE	canonical	1	15896	junction_10	174216.58162784047	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	282	1676	5.0	-41	True	CATAAA	-17
PB.2800.3	chr12	-	2633	2	full-splice_match	BTG1	ENST00000256015.4	4680	2	51	1996	51	1844	multi-exon	FALSE	canonical	1	1630082	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	171	516	312	827	50.0	-1	True	AATAAA	-30
PB.2800.2	chr12	-	3870	2	full-splice_match	BTG1	ENST00000256015.4	4680	2	49	761	49	-761	multi-exon	FALSE	canonical	1	1630082	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	314	829	20.0	-3	True	AATAAA	-17
PB.4123.14	chr16	-	3470	8	full-splice_match	LUC7L	ENST00000397780.5	1335	8	-1763	-372	1	372	multi-exon	FALSE	canonical	1	400039	junction_6	171368.0825328322	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	2212	3030	30.0	-34	True	NA	NA
PB.1171.2	chr1	-	3290	11	incomplete-splice_match	CDC42BPA	ENST00000442054.5	3786	23	67747	-902	1344	902	5prime_fragment	FALSE	canonical	1	155580	junction_8	43225.122827934225	NA	1	NA	TRUE	NA	NA	NA	B	coding	552	1659	89	1747	25.0	NA	False	AATAAA	-15
PB.2226.14	chr11	-	1456	11	incomplete-splice_match	MRE11	ENST00000323977.7	2588	19	47	44255	7	11085	3prime_fragment	FALSE	canonical	1	76103	junction_7	35547.72619226158	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1206	250	1455	65.0	6	True	NA	NA
PB.2226.13	chr11	-	1715	14	incomplete-splice_match	MRE11	ENST00000323929.7	6897	20	33	40736	-1	-10575	3prime_fragment	FALSE	canonical	1	76103	junction_10	54417.042900940876	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1524	191	1714	70.0	-3	True	NA	NA
PB.2226.12	chr11	-	1786	14	incomplete-splice_match	MRE11	ENST00000323977.7	2588	19	35	36438	4	-10575	3prime_fragment	FALSE	canonical	1	76103	junction_10	54610.802691333105	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1524	262	1785	70.0	-6	True	NA	NA
PB.2226.11	chr11	-	2553	20	full-splice_match	MRE11	ENST00000323929.7	6897	20	56	4288	-3	0	multi-exon	FALSE	canonical	1	76103	junction_16	49143.327111465376	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	168	2294	40.0	-19	True	AATAAA	-31
PB.2226.10	chr11	-	2639	20	novel_in_catalog	MRE11	novel	6897	20	NA	NA	5	-26	combination_of_known_junctions	FALSE	canonical	1	76103	junction_16	49311.564324312436	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	292	2418	50.0	3	True	AGTAAA	-5
PB.365.9	chr1	+	2676	20	novel_in_catalog	KIF2C	novel	1124	11	NA	NA	57	-45	no_combination_of_known_junctions	FALSE	canonical	1	3654	junction_7	129881.85328174324	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	58	2133	75.0	-6531	False	NA	NA
PB.8745.11	chr4	-	2401	12	full-splice_match	UGDH	ENST00000316423.10	3216	12	10	805	10	351	multi-exon	FALSE	canonical	1	597196	junction_6	113944.3812403575	NA	2	NA	TRUE	NA	NA	NA	C	coding	494	1485	334	1818	65.0	-45	False	NA	NA
PB.8745.10	chr4	-	2290	11	novel_in_catalog	UGDH	novel	3216	12	NA	NA	61	-540	no_combination_of_known_junctions	FALSE	canonical	1	424	junction_1	255133.84044489276	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	102	1475	35.0	187	False	AATAAA	-18
PB.8745.13	chr4	-	2065	1	novel_in_catalog	UGDH	novel	3216	12	NA	NA	9	-4173	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-26	False	NA	NA
PB.8745.12	chr4	-	1914	12	full-splice_match	UGDH	ENST00000316423.10	3216	12	0	1302	0	-146	multi-exon	FALSE	canonical	1	597196	junction_6	113944.3812403575	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	344	1828	20.0	-55	False	ATTAAA	-10
PB.8640.2	chr3	+	3002	17	novel_not_in_catalog	LMLN	novel	2010	17	NA	NA	0	589	intron_retention	FALSE	canonical	1	2004	junction_7	9766.652097187654	NA	2	1	TRUE	NA	NA	NA	C	coding	679	2040	30	2069	75.0	-16	True	NA	NA
PB.7254.3	chr20	+	2883	19	novel_not_in_catalog	ACSS2	novel	455	2	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_18	122435.51807208662	NA	1	1	TRUE	NA	NA	NA	C	coding	701	2106	75	2180	25.0	-8	True	AATAAA	-12
PB.275.9	chr1	-	3170	16	full-splice_match	ZMYM6	ENST00000357182.8	4330	16	-28	1188	-28	-1188	multi-exon	FALSE	canonical	1	47968	junction_15	48925.17540008302	NA	1	NA	TRUE	NA	NA	NA	C	coding	971	2913	257	3169	20.0	-52	False	NA	NA
PB.9832.1	chr6	+	1595	5	novel_in_catalog	HLA-F	novel	1544	8	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	782165	junction_4	373564.48754356656	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	808	1479	30.0	0	True	AATAAA	-25
PB.7346.6	chr20	-	1818	1	incomplete-splice_match	B4GALT5	ENST00000371711.4	4722	9	79113	3	79113	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	106	321	783	1103	20.0	NA	False	AGTAAA	-20
PB.7346.5	chr20	-	2287	1	incomplete-splice_match	B4GALT5	ENST00000371711.4	4722	9	78644	3	78644	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AGTAAA	-20
PB.7346.1	chr20	-	4444	9	full-splice_match	B4GALT5	ENST00000371711.4	4722	9	275	3	275	-3	multi-exon	FALSE	canonical	1	257002	junction_8	155722.732162759	NA	4	NA	TRUE	NA	NA	NA	C	coding	344	1035	46	1080	20.0	323	False	AGTAAA	-20
PB.12084.2	chrX	+	2522	1	full-splice_match	GSPT2	ENST00000340438.5	2802	1	-17	297	-17	-297	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	628	1887	214	2100	20.0	-28	True	AATAAA	-21
PB.3599.20	chr14	-	3830	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	8	4087	-4	3642	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	110	2494	20.0	-9	True	ATTAAA	-33
PB.3599.21	chr14	-	3584	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	2	4339	2	3390	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	116	2500	25.0	-15	True	ATTAAA	-21
PB.3599.22	chr14	-	3157	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	10	4758	-2	2971	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	3	NA	TRUE	NA	NA	NA	C	coding	794	2385	108	2492	15.0	-7	True	AATGAA	-15
PB.3599.23	chr14	-	2962	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	13	4950	1	2779	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	105	2489	70.0	-4	True	AATAGA	-17
PB.3599.24	chr14	-	2909	21	novel_in_catalog	SEL1L	novel	7925	21	NA	NA	3	2779	combination_of_known_junctions	FALSE	canonical	1	24599	junction_18	114880.07121955487	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	115	2436	70.0	-14	True	AATAGA	-17
PB.3599.25	chr14	-	2894	20	novel_in_catalog	SEL1L	novel	7925	21	NA	NA	0	2779	no_combination_of_known_junctions	FALSE	canonical	1	13233	junction_9	119821.07910602777	NA	3	NA	TRUE	NA	NA	NA	C	coding	771	2316	106	2421	70.0	-5	True	AATAGA	-17
PB.3599.26	chr14	-	3290	3	incomplete-splice_match	SEL1L	ENST00000557372.1	594	5	-1	19626	-1	-19626	3prime_fragment	FALSE	canonical	1	318514	junction_2	70796.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	107	475	0.0	-6	True	NA	NA
PB.3599.27	chr14	-	2331	1	genic	SEL1L	novel	NA	NA	NA	NA	-41	-27309	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-58	False	NA	NA
PB.6406.3	chr2	+	2771	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	400	1636	5	-1510	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	341	2413	20.0	2	True	NA	NA
PB.1094.1	chr1	+	2243	4	intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2817	junction_1	355.25045937885693	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	0.0	NA	False	AATAAA	-14
PB.5965.6	chr19	-	3522	6	full-splice_match	ZNF569	ENST00000316950.10	4061	6	16	523	16	-523	multi-exon	FALSE	canonical	1	20330	junction_5	26072.838894144228	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	543	2603	65.0	5	True	NA	NA
PB.5965.7	chr19	-	2760	6	full-splice_match	ZNF569	ENST00000316950.10	4061	6	197	1104	-11	296	multi-exon	FALSE	canonical	1	20330	junction_5	26072.838894144228	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	362	2422	55.0	-21	True	NA	NA
PB.5965.4	chr19	-	4399	6	novel_in_catalog	ZNF569	novel	3689	5	NA	NA	2	-5	intron_retention	FALSE	canonical	1	7677	junction_5	29904.3032261245	NA	9	NA	TRUE	NA	NA	NA	C	coding	686	2061	902	2962	45.0	-9	True	AATAAA	-12
PB.5965.5	chr19	-	3822	4	full-splice_match	ZNF569	ENST00000592490.5	579	4	-218	-3025	11	-5	multi-exon	FALSE	canonical	1	6372	junction_1	17434.522151945166	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	802	2385	45.0	0	True	AATAAA	-12
PB.5965.2	chr19	-	3868	6	full-splice_match	ZNF569	ENST00000316950.10	4061	6	206	-13	-2	13	multi-exon	FALSE	canonical	1	20330	junction_5	26072.838894144228	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	353	2413	35.0	-12	True	AATAAA	-30
PB.5965.3	chr19	-	3904	6	novel_in_catalog	ZNF569	novel	3689	5	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	5649	junction_5	30551.703974737644	NA	3	NA	TRUE	NA	NA	NA	C	coding	686	2061	400	2460	30.0	-27	True	AATAAA	-19
PB.5965.1	chr19	-	4339	6	full-splice_match	ZNF569	ENST00000316950.10	4061	6	-1	-277	-1	277	multi-exon	FALSE	canonical	1	20330	junction_5	26072.838894144228	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	560	2620	30.0	-12	True	AATAAA	-21
PB.3340.1	chr14	+	994	11	full-splice_match	PSME1	ENST00000206451.10	1006	11	7	5	2	-2	multi-exon	FALSE	canonical	1	2769999	junction_2	486779.6272130131	NA	0	NA	TRUE	NA	NA	NA	A	coding	249	750	99	848	25.0	7	True	AATAAA	-19
PB.9100.8	chr4	-	4190	5	full-splice_match	SORBS2	ENST00000476311.5	571	5	-52	-3567	-30	3162	multi-exon	FALSE	canonical	1	57110	junction_3	100011.52713687558	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	139	558	80.0	-1	True	NA	NA
PB.3912.10	chr15	+	3076	8	full-splice_match	RAB8B	ENST00000321437.8	4943	8	137	1730	0	-1730	multi-exon	FALSE	canonical	1	319918	junction_3	71382.8144772527	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	20	643	30.0	0	True	AATAAA	-23
PB.3912.11	chr15	+	3025	7	novel_in_catalog	RAB8B	novel	4943	8	NA	NA	0	-1730	no_combination_of_known_junctions	FALSE	canonical	1	4492	junction_6	144947.49685939925	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	20	592	30.0	0	True	AATAAA	-23
PB.3912.12	chr15	+	3236	10	novel_in_catalog	RAB8B	novel	4943	8	NA	NA	1	-1733	combination_of_known_junctions	FALSE	canonical	1	4741	junction_2	203015.57267526712	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	426	806	35.0	1	True	AATAAA	-20
PB.3912.13	chr15	+	4818	9	novel_not_in_catalog	RAB8B	novel	4943	8	NA	NA	2	-36	any annotated donor/acceptor	FALSE	canonical	1	2994	junction_3	185697.78020915968	NA	4	NA	TRUE	NA	NA	NA	C	coding	163	492	200	691	65.0	2	True	NA	NA
PB.6638.6	chr2	-	4965	21	novel_in_catalog	KANSL3	novel	5253	21	NA	NA	-1	-28	combination_of_known_junctions	FALSE	canonical	1	15941	junction_15	105817.77429065261	NA	2	NA	TRUE	NA	NA	NA	C	coding	526	1581	827	2407	75.0	-10	True	NA	NA
PB.3912.15	chr15	+	4362	3	incomplete-splice_match	RAB8B	ENST00000321437.8	4943	8	70156	13	70019	-13	5prime_fragment	FALSE	canonical	1	450104	junction_1	42601.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	4049	False	NA	NA
PB.9162.4	chr5	-	4596	36	novel_not_in_catalog	DROSHA	novel	5305	35	NA	NA	16	112	any annotated donor/acceptor	FALSE	canonical	1	105	junction_1	112347.85600221252	NA	3	NA	TRUE	NA	NA	NA	C	coding	1353	4062	381	4442	20.0	-20	True	AATAAA	-19
PB.2006.2	chr11	-	4086	20	novel_in_catalog	NXF1	novel	4128	20	NA	NA	0	0	intron_retention	TRUE	canonical	1	60728	junction_3	233306.68189651644	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	115	1185	5.0	417	False	TATAAA	-21
PB.10491.8	chr7	+	1467	10	novel_in_catalog	STARD3NL	novel	1728	9	NA	NA	3	33	combination_of_known_junctions	FALSE	canonical	1	1031	junction_1	276454.28305960464	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	254	958	10.0	-18	True	AATAAA	-19
PB.6638.9	chr2	-	3146	7	incomplete-splice_match	KANSL3	ENST00000447759.5	5012	22	26126	30	1476	-28	5prime_fragment	FALSE	canonical	1	25990	junction_6	104778.73005953492	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	57	737	75.0	4590	False	NA	NA
PB.2006.1	chr11	-	4048	20	full-splice_match	NXF1	ENST00000531709.6	4128	20	30	50	0	-2	multi-exon	FALSE	canonical	1	367425	junction_19	164361.3011850616	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	85	1155	10.0	-2	True	TATAAA	-12
PB.206.1	chr1	-	2380	2	full-splice_match	TENT5B	ENST00000289166.5	2368	2	-14	2	-14	-2	multi-exon	TRUE	canonical	1	89936	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	424	1275	184	1458	20.0	-1	True	AATAAA	-15
PB.8011.9	chr3	-	1711	14	full-splice_match	LRRFIP2	ENST00000354379.8	2821	14	44	1066	-8	-1	multi-exon	FALSE	canonical	1	150114	junction_8	211853.74812978657	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	380	1582	45.0	4	True	ATTAAA	-19
PB.7378.1	chr20	+	2014	7	full-splice_match	RAB22A	ENST00000244040.3	8670	7	19	6637	19	-6637	multi-exon	FALSE	canonical	1	238173	junction_1	91770.99364798711	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	263	847	30.0	0	True	AATAAA	-19
PB.7378.2	chr20	+	1815	7	full-splice_match	RAB22A	ENST00000244040.3	8670	7	19	6836	19	-6836	multi-exon	FALSE	canonical	1	238173	junction_1	91770.99364798711	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	263	847	25.0	0	True	NA	NA
PB.7378.3	chr20	+	8636	7	full-splice_match	RAB22A	ENST00000244040.3	8670	7	33	1	-29	-1	multi-exon	FALSE	canonical	1	238173	junction_1	91770.99364798711	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	249	833	25.0	14	True	AATAAA	-20
PB.2006.5	chr11	-	2236	21	novel_in_catalog	NXF1	novel	4128	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	60728	junction_3	239294.76190712472	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	115	1932	10.0	417	False	TATAAA	-13
PB.8724.8	chr4	+	1720	12	full-splice_match	RBPJ	ENST00000355476.7	5990	12	199	4071	-1	-9	multi-exon	FALSE	canonical	1	102696	junction_8	148300.89591393585	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	210	1670	75.0	-8	True	AAAAAG	-3
PB.3279.5	chr13	+	2001	18	full-splice_match	CDC16	ENST00000356221.7	2203	18	-92	294	-2	-104	multi-exon	FALSE	canonical	1	295610	junction_1	125722.23292964777	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1800	201	2000	55.0	-12	True	AAGAAA	-7
PB.8724.6	chr4	+	2096	10	novel_in_catalog	RBPJ	novel	609	5	NA	NA	-20	0	intron_retention	FALSE	canonical	1	32043	junction_1	164250.40714179954	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	53	1192	95.0	7	True	NA	NA
PB.4537.13	chr16	-	3726	23	full-splice_match	AP1G1	ENST00000299980.8	6969	23	356	2887	-11	-4	multi-exon	FALSE	canonical	1	200130	junction_17	93919.1803663445	NA	1	NA	TRUE	NA	NA	NA	C	coding	822	2469	87	2555	40.0	-12	True	AATAAA	-13
PB.4537.10	chr16	-	4824	23	novel_in_catalog	AP1G1	novel	6969	23	NA	NA	3	867	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	138694.10878200526	NA	1	1	TRUE	NA	NA	NA	C	coding	556	1671	1112	2782	15.0	23	True	AATAGA	-17
PB.4537.11	chr16	-	4868	23	full-splice_match	AP1G1	ENST00000299980.8	6969	23	85	2016	-13	867	multi-exon	FALSE	canonical	1	200130	junction_17	93919.1803663445	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	358	2826	15.0	33	False	AATAGA	-17
PB.4537.16	chr16	-	3783	23	novel_in_catalog	AP1G1	novel	6969	23	NA	NA	-151	-4	combination_of_known_junctions	FALSE	canonical	1	16072	junction_22	119941.96426791702	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	144	2612	40.0	505	False	AATAAA	-13
PB.8724.3	chr4	+	1966	12	novel_in_catalog	RBPJ	novel	609	5	NA	NA	-71	1	combination_of_known_junctions	FALSE	canonical	1	12625	junction_1	162618.116369366	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	329	1789	100.0	-44	True	NA	NA
PB.4537.14	chr16	-	3851	24	novel_in_catalog	AP1G1	novel	6969	23	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	20519	junction_23	136556.95830470484	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	212	2680	40.0	-1	True	AATAAA	-13
PB.4537.15	chr16	-	4084	24	novel_in_catalog	AP1G1	novel	6969	23	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	11843	junction_23	137492.7018092288	NA	1	1	TRUE	NA	NA	NA	C	coding	822	2469	445	2913	40.0	24	True	AATAAA	-13
PB.6351.4	chr2	-	6059	40	novel_not_in_catalog	ITSN2	novel	2035	2	NA	NA	-19	1	intron_retention	FALSE	canonical	1	22450	junction_38	83867.5612280726	NA	0	NA	TRUE	NA	NA	NA	C	coding	1643	4932	368	5299	30.0	-9	True	AATAAA	-20
PB.6351.6	chr2	-	7083	30	novel_not_in_catalog	ITSN2	novel	5814	39	NA	NA	-44	2	intron_retention	FALSE	canonical	1	22450	junction_28	83004.47010095057	NA	0	NA	TRUE	NA	NA	NA	C	coding	1138	3417	393	3809	15.0	-34	True	ATTAAA	-18
PB.6351.7	chr2	-	7253	29	novel_not_in_catalog	ITSN2	novel	5814	39	NA	NA	-79	-1	intron_retention	FALSE	canonical	1	115515	junction_28	63421.93407456863	NA	0	NA	TRUE	NA	NA	NA	C	coding	1151	3456	527	3982	20.0	-10	True	ATTAAA	-15
PB.6351.1	chr2	-	6047	39	full-splice_match	ITSN2	ENST00000361999.7	5814	39	-226	-7	-26	7	multi-exon	TRUE	canonical	1	105390	junction_3	74028.45108780701	NA	0	NA	TRUE	NA	NA	NA	C	coding	1669	5010	269	5278	30.0	-16	True	AATAAA	-29
PB.6351.2	chr2	-	6000	39	novel_not_in_catalog	ITSN2	novel	2035	2	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	105390	junction_3	73717.75003148355	NA	0	NA	TRUE	NA	NA	NA	C	coding	1656	4971	269	5239	25.0	-16	True	AATAAA	-21
PB.8114.1	chr3	+	1952	3	full-splice_match	TCTA	ENST00000273590.3	2146	3	195	-1	1	1	multi-exon	TRUE	canonical	1	393859	junction_1	23005.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	27	338	10.0	-22	True	ATTAAA	-13
PB.7969.12	chr3	-	2432	22	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	-1	-7248	combination_of_known_junctions	FALSE	canonical	1	5439	junction_19	105483.26644120658	NA	1	1	TRUE	NA	NA	NA	C	coding	625	1875	557	2431	65.0	1	True	AGTAAA	-21
PB.7969.13	chr3	-	2251	21	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	7	-7248	combination_of_known_junctions	FALSE	canonical	1	13834	junction_18	96682.3318336913	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1875	376	2250	65.0	-23	True	AGTAAA	-21
PB.7969.10	chr3	-	3196	22	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	1	48855	junction_21	76537.2194429544	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	236	2623	85.0	-1	True	AATAGA	-35
PB.7969.11	chr3	-	3144	22	full-splice_match	TBC1D5	ENST00000429383.8	3156	22	-6	18	-6	-18	multi-exon	FALSE	canonical	1	3211	junction_21	89428.31755785762	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	184	2571	85.0	234	False	AATAGA	-35
PB.6351.8	chr2	-	7043	29	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-34	0	intron_retention	FALSE	canonical	1	115515	junction_28	64129.147838401776	NA	1	NA	TRUE	NA	NA	NA	C	coding	1164	3495	277	3771	15.0	-24	True	ATTAAA	-16
PB.8011.8	chr3	-	1832	15	full-splice_match	LRRFIP2	ENST00000421276.6	2522	15	10	680	0	3	multi-exon	FALSE	canonical	1	278383	junction_14	192362.32862275394	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	391	1665	30.0	-7	True	AATGAA	-18
PB.7574.4	chr21	+	2194	2	full-splice_match	MCM3AP-AS1	ENST00000444998.1	2193	2	-15	14	0	-14	multi-exon	FALSE	canonical	1	4558	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-6	True	GATAAA	-27
PB.6489.19	chr2	-	4868	25	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-66	0	intron_retention	FALSE	canonical	1	9823	junction_12	369310.47408912936	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3177	807	3983	20.0	-1	True	AATAAA	-15
PB.6921.1	chr2	-	6491	25	full-splice_match	SF3B1	ENST00000335508.10	6526	25	48	-13	-16	13	multi-exon	TRUE	canonical	1	1186834	junction_14	490519.2321106714	NA	2	NA	TRUE	NA	NA	NA	C	coding	1304	3915	45	3959	30.0	-16	True	AATAAA	-30
PB.6921.7	chr2	-	6177	24	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-1	346	intron_retention	FALSE	canonical	1	1186834	junction_14	474392.5568810217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3477	2307	5783	35.0	-1	True	GATAAA	-16
PB.6921.6	chr2	-	4339	25	full-splice_match	SF3B1	ENST00000335508.10	6526	25	63	2124	-1	347	multi-exon	FALSE	canonical	1	1186834	junction_14	490519.2321106714	NA	0	NA	TRUE	NA	NA	NA	C	coding	1304	3915	30	3944	35.0	-1	True	GATAAA	-17
PB.6921.5	chr2	-	5472	25	full-splice_match	SF3B1	ENST00000335508.10	6526	25	53	1001	-11	-1001	multi-exon	FALSE	canonical	1	1186834	junction_14	490519.2321106714	NA	0	NA	TRUE	NA	NA	NA	C	coding	1304	3915	40	3954	65.0	-11	True	NA	NA
PB.6921.4	chr2	-	5638	25	full-splice_match	SF3B1	ENST00000335508.10	6526	25	45	843	-19	-843	multi-exon	FALSE	canonical	1	1186834	junction_14	490519.2321106714	NA	0	NA	TRUE	NA	NA	NA	C	coding	1304	3915	48	3962	85.0	-19	True	NA	NA
PB.2390.1	chr12	-	1590	1	full-splice_match	RPS4XP14	ENST00000493072.1	781	1	-50	-759	-50	759	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-28	False	NA	NA
PB.10891.7	chr7	+	2749	2	full-splice_match	SSBP1	ENST00000468267.1	800	2	-26	-1923	-8	-11	multi-exon	FALSE	canonical	1	184811	junction_1	0.0	NA	6	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	11	True	AATATA	-16
PB.11750.8	chr9	+	4108	2	full-splice_match	TRIM32	ENST00000450136.1	3717	2	31	-422	3	420	multi-exon	FALSE	canonical	1	47799	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	131	2092	40.0	-4	True	AGTAAA	-19
PB.11750.9	chr9	+	2298	3	novel_not_in_catalog	TRIM32	novel	3717	2	NA	NA	3	-549	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	23899.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	131	1666	10.0	-4	True	ATTAAA	-21
PB.9262.10	chr5	+	2558	10	full-splice_match	PIK3R1	ENST00000336483.9	2439	10	30	-149	-5	-21	multi-exon	FALSE	canonical	1	44564	junction_1	174740.68682062346	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	63	1427	80.0	-5	True	NA	NA
PB.11750.2	chr9	+	6132	2	full-splice_match	TRIM32	ENST00000373983.2	3688	2	-17	-2427	11	2427	multi-exon	FALSE	canonical	1	56470	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	653	1962	148	2109	75.0	-24	True	NA	NA
PB.11750.3	chr9	+	3156	2	full-splice_match	TRIM32	ENST00000450136.1	3717	2	12	549	12	-549	multi-exon	FALSE	canonical	1	47799	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	150	2111	10.0	-23	True	ATTAAA	-21
PB.751.2	chr1	+	5025	21	novel_not_in_catalog	CGN	novel	564	2	NA	NA	68	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	37257.021491089436	NA	1	NA	TRUE	NA	NA	NA	A	coding	741	2226	84	2309	15.0	7	False	NA	NA
PB.11750.6	chr9	+	2522	3	full-splice_match	TRIM32	ENST00000411410.1	699	3	-27	-1796	-14	-1242	multi-exon	FALSE	canonical	1	2563	junction_1	158.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	209	2170	10.0	-21	True	ATTAAA	-17
PB.11750.7	chr9	+	3696	2	full-splice_match	TRIM32	ENST00000450136.1	3717	2	23	-2	-5	0	multi-exon	FALSE	canonical	1	47799	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	139	2100	5.0	-12	True	ATTAAA	-16
PB.11750.4	chr9	+	2615	2	full-splice_match	TRIM32	ENST00000450136.1	3717	2	13	1089	13	-1089	multi-exon	FALSE	canonical	1	47799	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	149	2110	30.0	-22	True	NA	NA
PB.11750.5	chr9	+	3212	3	novel_in_catalog	TRIM32	novel	3717	2	NA	NA	-14	-549	no_combination_of_known_junctions	FALSE	canonical	1	1120	junction_2	721.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	206	2167	10.0	-21	True	ATTAAA	-21
PB.238.1	chr1	-	1904	5	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-23	6	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1988273.154150669	NA	17	3	TRUE	NA	NA	NA	C	coding	146	441	99	539	20.0	5	True	AATAAA	-22
PB.9446.2	chr5	-	2120	4	full-splice_match	ZCCHC10	ENST00000324170.7	2178	4	55	3	0	-3	multi-exon	FALSE	canonical	1	83960	junction_3	60188.833130037965	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	13	525	25.0	-1	True	AATAAA	-26
PB.238.3	chr1	-	4686	6	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-22	0	intron_retention	FALSE	canonical	1	2581063	junction_5	765656.1282892993	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	2758	3327	5.0	6	True	AATAAA	-16
PB.238.2	chr1	-	2306	8	full-splice_match	LAPTM5	ENST00000464569.1	953	8	67	-1420	67	0	multi-exon	FALSE	canonical	1	22334	junction_7	1613619.580976424	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	249	947	5.0	2	True	AATAAA	-16
PB.238.5	chr1	-	3734	6	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-26	0	intron_retention	FALSE	canonical	1	2581063	junction_5	496006.39242267836	NA	4	NA	TRUE	NA	NA	NA	C	coding	126	381	1995	2375	5.0	2	True	AATAAA	-16
PB.238.4	chr1	-	3951	7	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-26	0	intron_retention	FALSE	canonical	1	2581063	junction_6	930858.1548076425	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	2023	2592	5.0	2	True	AATAAA	-16
PB.238.7	chr1	-	2923	7	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-17	0	intron_retention	FALSE	canonical	1	2581063	junction_6	830222.1046853298	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	30	521	5.0	-1	True	AATAAA	-16
PB.9446.3	chr5	-	2148	4	full-splice_match	ZCCHC10	ENST00000509008.1	608	4	0	-1540	0	-3	multi-exon	FALSE	canonical	1	22908	junction_2	86973.76507251419	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-26
PB.238.9	chr1	-	2406	9	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	-1072	0	any annotated donor/acceptor	FALSE	canonical	1	2004	junction_8	1556830.3735604866	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	259	1047	5.0	7112	False	AATAAA	-16
PB.290.16	chr1	+	2496	9	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	19	8599	2	2589	3prime_fragment	FALSE	canonical	1	214552	junction_6	202159.7749638575	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2289	206	2494	60.0	-19	True	CATAAA	-6
PB.290.15	chr1	+	4463	13	novel_not_in_catalog	THRAP3	novel	4432	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	25841	junction_2	292784.5538197152	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	262	3126	20.0	-23	True	AATAAA	-21
PB.290.14	chr1	+	2010	6	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	14	13929	-2	-2741	3prime_fragment	FALSE	canonical	1	530840	junction_4	90114.37954422146	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1800	211	2010	55.0	-24	True	NA	NA
PB.290.13	chr1	+	2108	6	novel_in_catalog	THRAP3	novel	4432	12	NA	NA	-2	-1489	no_combination_of_known_junctions	FALSE	canonical	1	48940	junction_1	280109.99202270526	NA	8	1	TRUE	NA	NA	NA	C	coding	667	2001	108	2108	65.0	-24	True	ACTAAA	-34
PB.290.12	chr1	+	2211	7	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	14	12677	-2	-1489	3prime_fragment	FALSE	canonical	1	214552	junction_6	177522.22523547735	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2001	211	2211	65.0	-24	True	ACTAAA	-34
PB.290.11	chr1	+	2791	11	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	14	3726	-2	-2517	3prime_fragment	FALSE	canonical	1	214552	junction_6	198576.01863268885	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2580	211	2790	60.0	-24	True	NA	NA
PB.5390.5	chr18	+	1726	7	full-splice_match	VAPA	ENST00000340541.4	1227	7	-32	-467	-22	348	multi-exon	FALSE	canonical	1	101896	junction_4	637433.7383299799	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	249	1112	5.0	1	True	AATAAA	-25
PB.9446.1	chr5	-	2197	5	full-splice_match	ZCCHC10	ENST00000509437.5	1070	5	-15	-1112	11	-3	multi-exon	FALSE	canonical	1	73174	junction_3	55695.0959106814	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	24	602	25.0	-12	True	AATAAA	-26
PB.9446.4	chr5	-	2078	3	full-splice_match	ZCCHC10	ENST00000513848.5	876	3	22	-1224	0	-3	multi-exon	FALSE	canonical	1	23572	junction_1	30194.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	13	483	25.0	-1	True	AATAAA	-26
PB.11977.5	chrX	-	2796	3	incomplete-splice_match	FANCB	ENST00000452869.1	2712	10	-6	19286	4	2364	3prime_fragment	FALSE	canonical	1	39672	junction_2	9423.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	283	1233	15.0	0	True	TTTAAA	-30
PB.5127.1	chr17	+	5044	12	full-splice_match	DGKE	ENST00000284061.7	8660	12	-16	3632	-16	-141	multi-exon	FALSE	canonical	1	33678	junction_1	16075.446762939411	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	197	1900	10.0	-72	False	AATACA	-30
PB.5127.2	chr17	+	1868	2	full-splice_match	DGKE	ENST00000572810.1	1843	2	-22	-3	-14	3	multi-exon	FALSE	canonical	1	33678	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	195	728	15.0	-70	True	AATAAA	-16
PB.5127.3	chr17	+	6131	12	full-splice_match	DGKE	ENST00000284061.7	8660	12	-9	2538	-9	953	multi-exon	FALSE	canonical	1	33678	junction_1	16075.446762939411	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	190	1893	5.0	-65	True	AGTAAA	-12
PB.5127.4	chr17	+	6992	12	full-splice_match	DGKE	ENST00000284061.7	8660	12	12	1656	4	-1656	multi-exon	FALSE	canonical	1	33678	junction_1	16075.446762939411	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	169	1872	90.0	-44	True	NA	NA
PB.5127.5	chr17	+	6946	12	novel_in_catalog	DGKE	novel	8660	12	NA	NA	-7	-1656	combination_of_known_junctions	FALSE	canonical	1	1368	junction_11	24483.21667949713	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	156	1826	90.0	-31	True	NA	NA
PB.11977.3	chrX	-	3506	10	full-splice_match	FANCB	ENST00000398334.5	3008	10	-14	-484	-7	482	multi-exon	FALSE	canonical	1	23350	junction_7	10269.432240548153	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2562	301	2862	35.0	13	False	ATTAAA	-14
PB.11977.2	chrX	-	3627	10	full-splice_match	FANCB	ENST00000398334.5	3008	10	3	-622	3	620	multi-exon	FALSE	canonical	1	23350	junction_7	10269.432240548153	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2562	284	2845	75.0	-1	True	NA	NA
PB.8114.2	chr3	+	3659	2	full-splice_match	TCTA	ENST00000488385.1	800	2	190	-3049	2	0	multi-exon	FALSE	canonical	1	393859	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	90	273	26	298	10.0	-21	True	ATTAAA	-12
PB.440.1	chr1	-	3255	1	full-splice_match	JUN	ENST00000371222.3	3540	1	280	5	280	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	327	984	990	1973	40.0	-1	True	AATAAA	-15
PB.1040.18	chr1	-	2273	4	full-splice_match	KDM5B	ENST00000650368.1	3779	4	2	1504	2	-675	multi-exon	FALSE	canonical	1	203318	junction_3	58846.066004638094	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	181	828	85.0	-5	True	NA	NA
PB.10.2	chr1	+	5745	29	novel_not_in_catalog	AGRN	novel	7323	36	NA	NA	-2010	0	intron_retention	FALSE	non_canonical	0	0	junction_1	217686.58742717133	NA	4	1	TRUE	NA	NA	NA	C	coding	1467	4404	205	4608	15.0	-1775	False	AATAAA	-20
PB.769.3	chr1	-	2319	1	novel_in_catalog	GATAD2B	novel	1027	4	NA	NA	3093	-1902	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	9974	False	TTTAAA	-21
PB.10.1	chr1	+	7349	36	full-splice_match	AGRN	ENST00000379370.6	7323	36	-30	4	-30	0	multi-exon	TRUE	canonical	1	340143	junction_6	202123.34893360417	NA	0	NA	TRUE	NA	NA	NA	C	coding	2045	6138	81	6218	30.0	-27	True	AATAAA	-14
PB.769.6	chr1	-	1827	8	novel_not_in_catalog	GATAD2B	novel	7478	11	NA	NA	-3	-1735	any annotated donor/acceptor	FALSE	canonical	1	2966	junction_1	94557.10910408826	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	241	1542	30.0	0	True	NA	NA
PB.9447.2	chr5	+	4316	19	full-splice_match	HSPA4	ENST00000304858.6	4825	19	149	360	-17	-360	multi-exon	FALSE	canonical	1	746881	junction_1	385561.1102680237	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	141	2663	65.0	-7699	False	NA	NA
PB.769.4	chr1	-	2389	11	full-splice_match	GATAD2B	ENST00000368655.4	7478	11	3	5086	3	-1	multi-exon	FALSE	canonical	1	90664	junction_10	51296.904729232934	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	242	2023	0.0	-1	True	NA	NA
PB.769.5	chr1	-	1995	11	full-splice_match	GATAD2B	ENST00000368655.4	7478	11	145	5338	-2	34	multi-exon	FALSE	canonical	1	90664	junction_10	51296.904729232934	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	100	1881	70.0	30	True	NA	NA
PB.2901.5	chr12	+	1905	15	full-splice_match	TCTN1	ENST00000551590.5	2309	15	102	302	3	0	multi-exon	FALSE	non_canonical	0	0	junction_10	63594.25964969525	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	55	1818	15.0	-3	True	ATTAAA	-18
PB.2901.4	chr12	+	2071	5	novel_not_in_catalog	TCTN1	novel	2149	4	NA	NA	3	-73	any annotated donor/acceptor	FALSE	canonical	1	681	junction_1	92543.87911789467	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	326	889	75.0	-3	True	NA	NA
PB.2901.7	chr12	+	1891	16	novel_not_in_catalog	TCTN1	novel	2149	4	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	81966.88713116616	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	32	1807	20.0	20	True	ATTAAA	-15
PB.2901.6	chr12	+	1692	13	novel_in_catalog	TCTN1	novel	2149	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	7038	junction_9	74266.00719537208	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	55	1605	15.0	-3	True	ATTAAA	-18
PB.2901.1	chr12	+	2070	4	full-splice_match	TCTN1	ENST00000550703.6	2149	4	46	33	10	-33	multi-exon	FALSE	canonical	1	141747	junction_3	33664.52174355403	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	111	848	35.0	-105	False	NA	NA
PB.6070.1	chr19	+	2279	11	novel_not_in_catalog	RELB	novel	2294	12	NA	NA	-9	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	103118.53900249944	NA	1	1	TRUE	NA	NA	NA	B	coding	442	1329	548	1876	0.0	-29	True	AATAAA	-18
PB.2901.3	chr12	+	1760	14	novel_in_catalog	TCTN1	novel	2149	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	13687	junction_10	63595.159239506786	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	58	1674	15.0	-6	True	ATTAAA	-17
PB.2901.2	chr12	+	1805	14	novel_in_catalog	TCTN1	novel	2149	4	NA	NA	-1	0	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_9	67348.15609218823	NA	3	NA	TRUE	NA	NA	NA	C	coding	409	1230	492	1721	20.0	-27	True	ATTAAA	-15
PB.2901.9	chr12	+	1935	15	full-splice_match	TCTN1	ENST00000495659.6	1988	15	52	1	-5	1	multi-exon	FALSE	non_canonical	0	0	junction_10	71259.57200335995	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	254	1849	15.0	-19	False	ATTAAA	-17
PB.2901.8	chr12	+	1867	3	full-splice_match	TCTN1	ENST00000546643.1	926	3	32	-973	-8	-32	multi-exon	FALSE	canonical	1	21065	junction_1	60341.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	67	204	441	644	35.0	-22	False	NA	NA
PB.9148.2	chr5	-	2131	3	novel_not_in_catalog	DAP	novel	2339	4	NA	NA	76065	-1	any annotated donor/acceptor	FALSE	canonical	1	2217	junction_2	553656.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	245	655	15.0	-3941	False	AATAAA	-19
PB.8379.1	chr3	+	2212	7	full-splice_match	EEFSEC	ENST00000254730.10	2232	7	18	2	18	2	multi-exon	FALSE	canonical	1	117830	junction_1	47893.46884376709	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	37	1827	5.0	-11	True	AATAAA	-24
PB.8379.2	chr3	+	2056	7	full-splice_match	EEFSEC	ENST00000254730.10	2232	7	27	149	-20	-145	multi-exon	FALSE	canonical	1	117830	junction_1	47893.46884376709	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	28	1818	30.0	-2	True	NA	NA
PB.567.1	chr1	+	4278	16	full-splice_match	CDC14A	ENST00000336454.4	4258	16	-23	3	-10	-3	multi-exon	FALSE	canonical	1	59222	junction_15	16428.62899723799	NA	0	NA	TRUE	NA	NA	NA	A	coding	594	1785	499	2283	15.0	-49	True	AATAAA	-22
PB.3850.1	chr15	+	1362	6	full-splice_match	DUT	ENST00000455976.6	1935	6	-674	1247	6	-15	multi-exon	TRUE	canonical	1	1151750	junction_4	138424.21434907985	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	824	1318	75.0	0	True	ATTAAA	-44
PB.3850.3	chr15	+	1187	7	full-splice_match	DUT	ENST00000331200.7	2147	7	6	954	6	24	multi-exon	FALSE	canonical	1	227071	junction_1	445887.21354374534	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	154	846	30.0	0	True	ATTAAA	-23
PB.3850.2	chr15	+	1302	7	full-splice_match	DUT	ENST00000331200.7	2147	7	6	839	6	139	multi-exon	FALSE	canonical	1	227071	junction_1	445887.21354374534	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	154	846	70.0	0	True	AGTAAA	-43
PB.3850.5	chr15	+	921	6	full-splice_match	DUT	ENST00000455976.6	1935	6	64	950	-43	24	multi-exon	FALSE	canonical	1	1151750	junction_4	138424.21434907985	NA	4	NA	TRUE	NA	NA	NA	C	coding	164	495	86	580	30.0	-30	True	ATTAAA	-23
PB.3850.4	chr15	+	1774	6	full-splice_match	DUT	ENST00000455976.6	1935	6	-674	835	6	139	multi-exon	FALSE	canonical	1	1151750	junction_4	138424.21434907985	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	824	1318	70.0	0	True	AGTAAA	-43
PB.3850.7	chr15	+	1878	6	full-splice_match	DUT	ENST00000455976.6	1935	6	59	-2	-48	2	multi-exon	FALSE	canonical	1	1151750	junction_4	138424.21434907985	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	91	585	35.0	-35	True	AATAAA	-25
PB.3850.6	chr15	+	3667	5	novel_in_catalog	DUT	novel	569	6	NA	NA	8	24	intron_retention	FALSE	canonical	1	1151750	junction_3	137618.72829851322	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	3012	3326	30.0	2	True	ATTAAA	-23
PB.831.8	chr1	-	2366	4	novel_in_catalog	ISG20L2	novel	3178	3	NA	NA	2	-345	combination_of_known_junctions	FALSE	canonical	1	22726	junction_3	216587.4987071558	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	192	1253	15.0	17	True	NA	NA
PB.8415.3	chr3	+	3971	16	full-splice_match	EPHB1	ENST00000398015.7	4672	16	264	437	-106	276	multi-exon	FALSE	canonical	1	18333	junction_1	11700.11838496612	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	107	3061	75.0	2	True	NA	NA
PB.963.7	chr1	-	3474	7	full-splice_match	TOR1AIP2	ENST00000609928.5	4364	7	0	890	0	-890	multi-exon	FALSE	canonical	1	46254	junction_4	86142.41378815664	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	812	2224	30.0	-1	True	AGTAAA	-18
PB.10410.2	chr7	+	2740	2	full-splice_match	ARL4A	ENST00000356797.7	1147	2	-54	-1539	-2	-219	multi-exon	FALSE	canonical	1	62810	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	280	882	55.0	-49	True	AATAAA	-9
PB.10410.3	chr7	+	2157	2	full-splice_match	ARL4A	ENST00000356797.7	1147	2	-52	-958	0	-800	multi-exon	FALSE	canonical	1	62810	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	278	880	30.0	-47	True	AATAAA	-16
PB.10410.1	chr7	+	1204	2	full-splice_match	ARL4A	ENST00000356797.7	1147	2	-55	-2	-3	-1	multi-exon	FALSE	canonical	1	62810	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	281	883	10.0	-50	True	AATAAA	-16
PB.963.11	chr1	-	1900	4	novel_not_in_catalog	TOR1AIP2	novel	7905	6	NA	NA	0	2621	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	137353.82659718255	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-15
PB.10410.4	chr7	+	2646	2	full-splice_match	ARL4A	ENST00000396663.2	3212	2	347	219	-2	-219	multi-exon	FALSE	canonical	1	118631	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	186	788	55.0	0	True	AATAAA	-9
PB.11688.5	chr9	-	2780	16	novel_not_in_catalog	TEX10	novel	3006	15	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	10433	junction_13	89183.78799884104	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	178	2679	40.0	-15	True	ATTAAA	-12
PB.963.5	chr1	-	4360	7	full-splice_match	TOR1AIP2	ENST00000609928.5	4364	7	0	4	0	-4	multi-exon	FALSE	canonical	1	46254	junction_4	86142.41378815664	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	812	2224	35.0	-1	True	AATAAA	-19
PB.6864.11	chr2	+	3155	19	novel_in_catalog	AGPS	novel	7764	20	NA	NA	3	1017	no_combination_of_known_junctions	FALSE	canonical	1	1241	junction_7	109891.06329058703	NA	2	NA	TRUE	NA	NA	NA	C	coding	631	1896	20	1915	25.0	-2	True	ATTAAA	-18
PB.963.2	chr1	-	7312	8	novel_not_in_catalog	TOR1AIP2	novel	7905	6	NA	NA	1	-1124	any annotated donor/acceptor	FALSE	canonical	1	18407	junction_5	96604.93012834304	NA	9	NA	TRUE	NA	NA	NA	C	coding	470	1413	920	2332	35.0	4	True	AATAAA	-14
PB.4681.1	chr17	-	5138	25	novel_in_catalog	MYBBP1A	novel	4104	27	NA	NA	-1	-2	intron_retention	TRUE	canonical	1	314898	junction_21	102899.91906091596	NA	0	NA	TRUE	NA	NA	NA	C	coding	1041	3126	64	3189	20.0	-4	True	AATAAA	-41
PB.1599.3	chr10	+	5009	5	novel_in_catalog	SCD	novel	5362	6	NA	NA	111	-9	no_combination_of_known_junctions	FALSE	canonical	1	42942	junction_4	480138.1919059866	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	271	921	15.0	2	True	AATAAA	-16
PB.1599.2	chr10	+	3601	6	full-splice_match	SCD	ENST00000370355.2	5362	6	148	1613	148	-1613	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	234	1313	75.0	-9425	False	NA	NA
PB.1599.1	chr10	+	5134	6	full-splice_match	SCD	ENST00000370355.2	5362	6	230	-2	230	2	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	152	1231	5.0	0	True	AATAAA	-27
PB.9133.4	chr5	+	1913	5	full-splice_match	SRD5A1	ENST00000274192.6	7132	5	47	5172	-37	242	multi-exon	FALSE	canonical	1	51002	junction_4	9164.379875365272	NA	3	NA	TRUE	NA	NA	NA	C	coding	259	780	188	967	5.0	-8	True	NA	NA
PB.1599.7	chr10	+	3917	6	full-splice_match	SCD	ENST00000370355.2	5362	6	230	1215	230	-1215	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	152	1231	20.0	0	True	AATAAA	-26
PB.1599.6	chr10	+	1511	6	full-splice_match	SCD	ENST00000370355.2	5362	6	122	3729	122	-3729	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	260	1339	35.0	13	True	TTTAAA	-36
PB.1599.5	chr10	+	2367	6	full-splice_match	SCD	ENST00000370355.2	5362	6	125	2870	125	-2870	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	257	1336	60.0	16	True	NA	NA
PB.1599.4	chr10	+	1640	4	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-18	-11413	any annotated donor/acceptor	FALSE	canonical	1	11229	junction_3	464976.88067281607	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	400	876	65.0	25	True	NA	NA
PB.11274.25	chr8	-	2475	15	full-splice_match	PABPC1	ENST00000318607.9	3485	15	624	386	-1	-17	multi-exon	FALSE	canonical	1	1799488	junction_8	1718957.1034622034	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	506	2416	50.0	-2	True	AAGAAA	-34
PB.1599.9	chr10	+	3943	7	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-14	-1216	any annotated donor/acceptor	FALSE	canonical	1	628	junction_1	425226.94060769875	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	179	1258	20.0	29	True	AATAAA	-25
PB.1599.8	chr10	+	4350	6	full-splice_match	SCD	ENST00000370355.2	5362	6	-14	1026	-14	-1026	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	396	1475	35.0	29	True	GATAAA	-14
PB.12347.1	chrX	-	2117	1	full-splice_match	AC245140.2	ENST00000624054.1	1939	1	-36	-142	-36	142	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	147	444	1198	1641	100.0	-25	True	NA	NA
PB.11289.1	chr8	+	1466	11	full-splice_match	DCAF13	ENST00000612750.4	1967	11	21	480	-2	-4	multi-exon	FALSE	canonical	1	195117	junction_4	159386.95245122796	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	38	1375	30.0	-9	True	AATAAA	-25
PB.9292.2	chr5	+	5430	36	full-splice_match	ARHGEF28	ENST00000513042.6	6273	36	38	805	0	0	multi-exon	FALSE	canonical	1	35510	junction_2	22498.27255380524	NA	0	NA	TRUE	NA	NA	NA	C	coding	1705	5118	139	5256	20.0	0	True	ATTAAA	-13
PB.9292.1	chr5	+	5253	35	full-splice_match	ARHGEF28	ENST00000296794.10	5246	35	-2	-5	-2	0	multi-exon	TRUE	canonical	1	35510	junction_2	22728.48265676556	NA	0	NA	TRUE	NA	NA	NA	C	coding	1651	4956	179	5134	15.0	-40	False	AATAAA	-19
PB.7581.1	chr21	+	2245	8	incomplete-splice_match	PRMT2	ENST00000355680.7	2688	12	545	4833	31	688	3prime_fragment	FALSE	canonical	1	300170	junction_1	313202.39544239943	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	218	1051	40.0	-14	False	AATAAA	-24
PB.3754.2	chr15	+	902	5	full-splice_match	EMC4	ENST00000267750.8	1036	5	17	117	-2	40	multi-exon	FALSE	canonical	1	1191734	junction_3	75244.02813637439	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	100	651	80.0	0	True	NA	NA
PB.10650.10	chr7	-	2683	12	full-splice_match	SLC25A40	ENST00000341119.9	4045	12	131	1231	87	-1231	multi-exon	FALSE	canonical	1	121255	junction_10	47449.18031252572	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	217	1233	30.0	15	True	ATTAAA	-18
PB.3754.1	chr15	+	1066	5	full-splice_match	EMC4	ENST00000267750.8	1036	5	-37	7	-37	0	multi-exon	FALSE	canonical	1	1191734	junction_3	75244.02813637439	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	154	705	50.0	-4967	False	AATAAA	-24
PB.1233.4	chr1	+	3161	11	novel_in_catalog	EXO1	novel	583	3	NA	NA	21	7670	combination_of_known_junctions	FALSE	canonical	1	69351	junction_2	41998.35915616228	NA	0	NA	TRUE	NA	NA	NA	B	coding	432	1299	576	1874	100.0	-3	True	NA	NA
PB.1233.5	chr1	+	3032	14	novel_in_catalog	EXO1	novel	583	3	NA	NA	21	-2	combination_of_known_junctions	FALSE	canonical	1	8720	junction_3	60092.542982721054	NA	0	NA	TRUE	NA	NA	NA	B	coding	806	2421	468	2888	15.0	-3	True	AATACA	-17
PB.1233.6	chr1	+	4156	16	novel_not_in_catalog	EXO1	novel	583	3	NA	NA	22	705	any annotated donor/acceptor	FALSE	canonical	1	53879	junction_11	53165.30282112782	NA	0	NA	TRUE	NA	NA	NA	B	coding	845	2538	575	3112	35.0	-2	True	NA	NA
PB.1233.7	chr1	+	4048	15	novel_in_catalog	EXO1	novel	583	3	NA	NA	-21	704	combination_of_known_junctions	FALSE	canonical	1	78442	junction_2	45481.07934350283	NA	2	1	TRUE	NA	NA	NA	B	coding	846	2541	465	3005	35.0	0	True	NA	NA
PB.1233.1	chr1	+	3375	15	novel_in_catalog	EXO1	novel	583	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	78442	junction_2	45481.07934350283	NA	0	NA	TRUE	NA	NA	NA	B	coding	846	2541	498	3038	40.0	-2	True	AGTAAA	-13
PB.1233.2	chr1	+	3078	15	novel_not_in_catalog	EXO1	novel	583	3	NA	NA	11	-2	any annotated donor/acceptor	FALSE	canonical	1	1985	junction_1	62737.69883167439	NA	2	NA	TRUE	NA	NA	NA	B	coding	845	2538	397	2934	15.0	-13	True	AATACA	-17
PB.1233.3	chr1	+	3462	16	novel_in_catalog	EXO1	novel	583	3	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	69351	junction_2	49298.1835110923	NA	1	NA	TRUE	NA	NA	NA	B	coding	846	2541	585	3125	40.0	-12	True	AGTAAA	-13
PB.10314.5	chr6	+	1656	9	novel_in_catalog	ACAT2	novel	3180	9	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	1	19536	junction_1	426450.10260990675	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	510	1436	30.0	2	True	AATAAA	-18
PB.1896.1	chr11	+	2010	5	full-splice_match	TRIM44	ENST00000299413.6	12964	5	65	10889	65	497	multi-exon	FALSE	canonical	1	82692	junction_3	229746.1937775031	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	243	1277	35.0	-10	True	ATTAAA	-20
PB.2936.5	chr12	+	2077	11	full-splice_match	RFC5	ENST00000454402.6	1655	11	18	-440	-1	-2	multi-exon	FALSE	canonical	1	260940	junction_1	44228.97864127093	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	101	1123	45.0	18	True	AATAAA	-22
PB.2936.4	chr12	+	2214	12	novel_in_catalog	RFC5	novel	572	6	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	14127	junction_2	140439.4854172	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	492	1259	50.0	8	True	AATAAA	-23
PB.2936.3	chr12	+	1972	11	full-splice_match	RFC5	ENST00000454402.6	1655	11	7	-324	-5	-118	multi-exon	FALSE	canonical	1	260940	junction_1	44228.97864127093	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	112	1134	25.0	7	True	AATAAA	-30
PB.2936.2	chr12	+	2112	12	novel_in_catalog	RFC5	novel	572	6	NA	NA	0	-117	combination_of_known_junctions	FALSE	canonical	1	14127	junction_2	140439.4854172	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	506	1273	30.0	-6	True	AATAAA	-31
PB.2936.1	chr12	+	2603	12	novel_in_catalog	RFC5	novel	572	6	NA	NA	1	-63	intron_retention	FALSE	canonical	1	39997	junction_11	102607.06909837488	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	118	1140	45.0	1	True	CATAAA	-19
PB.10314.2	chr6	+	2826	9	full-splice_match	ACAT2	ENST00000367048.4	3180	9	1693	-1339	-474	1339	multi-exon	FALSE	canonical	1	1053057	junction_1	132094.51861823932	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	68	1261	50.0	-45	True	AATAAA	-21
PB.2138.1	chr11	+	1993	4	full-splice_match	FAM86C1	ENST00000346333.10	2010	4	10	7	2	-7	multi-exon	FALSE	canonical	1	5587	junction_2	20797.82971049303	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	18	413	45.0	6	True	NA	NA
PB.12357.1	chrX	-	2366	12	novel_in_catalog	G6PD	novel	2632	13	NA	NA	4	0	intron_retention	FALSE	canonical	1	62674	junction_11	632823.0620976096	NA	4	2	TRUE	NA	NA	NA	C	coding	487	1464	110	1573	5.0	-6	True	ATTAAA	-14
PB.12357.2	chrX	-	2287	13	full-splice_match	G6PD	ENST00000393562.8	2223	13	-64	0	-64	0	multi-exon	FALSE	canonical	1	847079	junction_1	324129.81500430073	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	131	1678	5.0	652	False	ATTAAA	-14
PB.2138.2	chr11	+	2091	5	full-splice_match	FAM86C1	ENST00000510443.5	1580	5	7	-518	3	6	multi-exon	FALSE	canonical	1	9980	junction_3	18184.797228729276	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	803	1183	30.0	7	True	NA	NA
PB.963.8	chr1	-	3390	8	novel_not_in_catalog	TOR1AIP2	novel	7905	6	NA	NA	-3	-1090	any annotated donor/acceptor	FALSE	canonical	1	18407	junction_5	96604.93012834304	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	928	2340	20.0	-4	True	GATAAA	-39
PB.1230.2	chr1	-	2137	10	novel_in_catalog	FH	novel	1797	10	NA	NA	7	-184	combination_of_known_junctions	FALSE	canonical	1	7288	junction_9	402794.72170076903	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	792	2096	50.0	0	True	AATAAA	-15
PB.963.9	chr1	-	3665	3	full-splice_match	TOR1AIP2	ENST00000482587.5	7067	3	-6	3408	-2	2627	multi-exon	FALSE	canonical	1	240108	junction_2	42025.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	927	1322	35.0	-3	True	AATAAA	-21
PB.11965.1	chrX	-	3866	13	full-splice_match	ARHGAP6	ENST00000303025.10	3946	13	77	3	77	0	multi-exon	FALSE	canonical	1	4420	junction_12	29280.03597198667	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	235	2550	15.0	-1	True	AATAAA	-10
PB.11965.2	chrX	-	3247	13	full-splice_match	ARHGAP6	ENST00000303025.10	3946	13	-13	712	-13	-709	multi-exon	FALSE	canonical	1	4420	junction_12	29280.03597198667	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	325	2640	65.0	3	True	NA	NA
PB.11965.3	chrX	-	2931	13	full-splice_match	ARHGAP6	ENST00000303025.10	3946	13	77	938	77	-935	multi-exon	FALSE	canonical	1	4420	junction_12	29280.03597198667	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	235	2550	70.0	-1	True	NA	NA
PB.363.4	chr1	-	1712	9	full-splice_match	ERI3	ENST00000372257.6	1684	9	-51	23	1	-23	multi-exon	FALSE	canonical	1	125025	junction_8	270661.1809756053	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	234	1247	20.0	-11	True	AATAAA	-16
PB.1128.1	chr1	-	2425	5	novel_not_in_catalog	SLC30A10	novel	1902	9	NA	NA	112257	1016	any annotated donor/acceptor	TRUE	canonical	1	54	junction_3	634.1759909520384	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-1	True	NA	NA
PB.363.1	chr1	-	1375	9	novel_not_in_catalog	ERI3	novel	1097	7	NA	NA	-29	-22	any annotated donor/acceptor	FALSE	canonical	1	8436	junction_8	300121.76153146575	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	130	909	20.0	0	True	AATAAA	-17
PB.8006.30	chr3	+	2438	4	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	-834	531	intron_retention	FALSE	canonical	1	1006157	junction_3	125032.1906932593	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	1596	1964	35.0	1326	False	AATAAA	-7
PB.9123.1	chr5	-	2132	17	full-splice_match	CLPTM1L	ENST00000320895.9	2500	17	244	124	32	0	multi-exon	FALSE	canonical	1	979102	junction_16	228248.1170350094	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	15	1631	20.0	243	False	AATAAA	-17
PB.9123.2	chr5	-	2871	2	novel_not_in_catalog	CLPTM1L	novel	2500	17	NA	NA	-758	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	coding	111	336	1862	2197	35.0	-877	False	TTTAAA	-23
PB.1585.8	chr10	-	3000	19	novel_in_catalog	HPS1	novel	3678	20	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	64238	junction_13	128082.05020689126	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	225	809	25.0	-2	True	NA	NA
PB.1585.9	chr10	-	2879	20	full-splice_match	HPS1	ENST00000325103.10	3703	20	4	820	4	-3	multi-exon	FALSE	canonical	1	155744	junction_17	105344.44306174351	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	231	2333	25.0	-8	True	NA	NA
PB.728.1	chr1	-	2059	4	full-splice_match	ENSA	ENST00000369014.9	2085	4	-16	42	0	-42	multi-exon	FALSE	canonical	1	1052	junction_2	722899.448557451	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	143	508	80.0	-36	True	NA	NA
PB.1585.4	chr10	-	2903	20	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	10650	junction_6	144458.04497663298	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	233	817	30.0	-10	True	NA	NA
PB.1585.5	chr10	-	2784	19	novel_in_catalog	HPS1	novel	3678	20	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	155744	junction_16	113678.62203214175	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	234	2237	30.0	-11	True	NA	NA
PB.1585.6	chr10	-	2731	19	novel_in_catalog	HPS1	novel	3678	20	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	74218	junction_15	122382.10507874985	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	451	2184	30.0	-2	True	NA	NA
PB.1585.7	chr10	-	2711	21	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	11343	junction_1	128573.81236934487	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	256	2358	30.0	-33	True	NA	NA
PB.1585.1	chr10	-	3714	20	full-splice_match	HPS1	ENST00000325103.10	3703	20	-9	-2	-8	2	multi-exon	FALSE	canonical	1	155744	junction_17	105344.44306174351	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	244	2346	30.0	-21	True	AATAAA	-32
PB.1585.2	chr10	-	2946	20	novel_in_catalog	HPS1	novel	3678	20	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	64238	junction_14	124666.59746118235	NA	3	NA	TRUE	NA	NA	NA	C	coding	376	1131	1269	2399	30.0	-31	True	NA	NA
PB.1585.3	chr10	-	2927	20	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	53	-2	any annotated donor/acceptor	FALSE	canonical	1	9488	junction_19	131927.04859976124	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	278	2380	30.0	105	False	NA	NA
PB.9474.1	chr5	-	2129	14	full-splice_match	CDC25C	ENST00000323760.10	2128	14	-8	7	-8	-7	multi-exon	FALSE	canonical	1	40268	junction_13	21330.075220200426	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	288	1709	20.0	-1	True	AATAAA	-13
PB.735.7	chr1	+	2658	6	novel_in_catalog	PRUNE1	novel	1065	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	41059	junction_2	81446.23088983308	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	523	1179	5.0	-7	True	ATTAAA	-16
PB.735.6	chr1	+	2955	8	full-splice_match	PRUNE1	ENST00000271620.7	2997	8	42	0	-11	0	multi-exon	FALSE	canonical	1	108193	junction_2	45901.87866636877	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	115	1476	5.0	-9	True	ATTAAA	-16
PB.3266.6	chr13	-	3335	22	full-splice_match	TUBGCP3	ENST00000261965.7	3899	22	14	550	14	289	multi-exon	FALSE	canonical	1	150653	junction_21	34462.11859774291	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2724	174	2897	70.0	-3	True	NA	NA
PB.5797.4	chr19	+	1849	8	full-splice_match	RAB8A	ENST00000586682.1	1315	8	-7	-527	-2	527	multi-exon	FALSE	canonical	1	10064	junction_6	387499.31651752756	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	13	636	15.0	1	True	ATTAAA	-15
PB.735.8	chr1	+	2472	5	full-splice_match	PRUNE1	ENST00000431193.5	845	5	-28	-1599	4	-1	multi-exon	FALSE	canonical	1	7528	junction_2	69414.78826049966	NA	8	NA	TRUE	NA	NA	NA	C	coding	218	657	338	994	5.0	-7	True	ATTAAA	-15
PB.5797.3	chr19	+	1943	8	novel_not_in_catalog	RAB8A	novel	2827	8	NA	NA	-17	527	any annotated donor/acceptor	FALSE	canonical	1	1991	junction_5	399688.572515438	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	28	750	15.0	-14	True	ATTAAA	-15
PB.5797.2	chr19	+	2578	8	full-splice_match	RAB8A	ENST00000300935.7	2827	8	246	3	-17	-3	multi-exon	FALSE	canonical	1	1020819	junction_7	64545.40642660413	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	28	651	20.0	-14	True	NA	NA
PB.5797.1	chr19	+	1872	8	full-splice_match	RAB8A	ENST00000300935.7	2827	8	258	697	-5	527	multi-exon	FALSE	canonical	1	1020819	junction_7	64545.40642660413	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	16	639	15.0	-2	True	ATTAAA	-15
PB.7830.8	chr22	-	3586	9	novel_not_in_catalog	NAGA	novel	3694	9	NA	NA	21	-20	intron_retention	FALSE	canonical	1	721	junction_3	122872.44759276793	NA	22	1	TRUE	NA	NA	NA	C	coding	240	723	513	1235	30.0	-20	True	NA	NA
PB.6864.10	chr2	+	7640	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	124	0	0	0	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	4	NA	TRUE	NA	NA	NA	C	coding	658	1977	23	1999	30.0	-5	True	AATAAA	-18
PB.11979.3	chrX	-	1713	7	full-splice_match	ASB9	ENST00000380485.7	1652	7	-63	2	24	0	multi-exon	FALSE	canonical	1	23220	junction_3	7564.620407969369	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	251	1039	20.0	8508	False	AATAAA	-24
PB.11979.2	chrX	-	3416	6	novel_in_catalog	ASB9	novel	633	6	NA	NA	10	0	intron_retention	FALSE	canonical	1	23545	junction_3	7528.405685136793	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	265	756	20.0	8494	False	AATAAA	-24
PB.11979.1	chrX	-	1625	8	novel_in_catalog	ASB9	novel	633	6	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	1	7382	junction_7	10783.806641138804	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	223	1107	15.0	8427	False	AATAAA	-25
PB.11803.1	chr9	+	2092	19	full-splice_match	STXBP1	ENST00000373299.4	3765	19	-18	1691	0	-36	multi-exon	FALSE	canonical	1	407873	junction_1	104746.88917801913	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	140	1924	70.0	-12	True	NA	NA
PB.2662.17	chr12	-	2252	8	novel_in_catalog	PMEL	novel	2127	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	23707	junction_7	518930.0893969736	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	690	2144	5.0	2	True	AATAAA	-14
PB.1194.1	chr1	+	1288	6	full-splice_match	ARV1	ENST00000310256.6	1335	6	45	2	0	-2	multi-exon	TRUE	canonical	1	266139	junction_3	44952.2980814107	NA	0	NA	TRUE	NA	NA	NA	A	coding	271	816	13	828	35.0	0	True	AATAAA	-18
PB.11173.1	chr8	-	1875	1	incomplete-splice_match	SLCO5A1	ENST00000260126.8	9076	10	165084	1059	162735	-1059	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.9210.1	chr5	-	3292	9	novel_in_catalog	HMGCS1	novel	3506	11	NA	NA	12	3	intron_retention	FALSE	canonical	1	39026	junction_7	464203.344724863	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	117	1553	20.0	16	False	AATAAA	-23
PB.2130.8	chr11	+	7212	4	incomplete-splice_match	CCND1	ENST00000227507.2	4307	5	69	1	-9	-1	intron_retention	FALSE	canonical	1	1805945	junction_1	203998.42676735416	NA	13	1	TRUE	NA	NA	NA	C	coding	274	825	159	983	5.0	0	True	AATAAA	-15
PB.7830.3	chr22	-	3509	8	novel_in_catalog	NAGA	novel	3694	9	NA	NA	7	-6	intron_retention	FALSE	canonical	1	13073	junction_6	111326.63844960825	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	718	1590	35.0	-34	True	NA	NA
PB.2662.14	chr12	-	2140	11	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	442131.5495878574	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	32	2032	5.0	-1	True	AATAAA	-14
PB.8245.1	chr3	+	5710	17	full-splice_match	EPHA3	ENST00000336596.6	5809	17	97	2	-41	-2	multi-exon	FALSE	canonical	1	40807	junction_1	11703.681311711018	NA	0	NA	TRUE	NA	NA	NA	A	coding	983	2952	129	3080	35.0	0	True	AATAAA	-29
PB.11176.9	chr8	-	2408	11	incomplete-splice_match	NCOA2	ENST00000452400.6	8447	23	-15	46392	-15	-183	3prime_fragment	FALSE	canonical	1	52952	junction_10	43370.68643680891	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2211	198	2408	55.0	-13	True	ATTAAA	-19
PB.7830.2	chr22	-	3803	10	novel_not_in_catalog	NAGA	novel	3694	9	NA	NA	7	-2	intron_retention	FALSE	canonical	1	2117	junction_9	148056.8092456406	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	693	1880	30.0	-34	True	NA	NA
PB.7055.3	chr2	+	3068	25	novel_in_catalog	SP140	novel	580	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	2538	junction_22	45158.66044470011	NA	1	1	TRUE	NA	NA	NA	C	coding	806	2421	116	2536	25.0	-12	True	NA	NA
PB.8146.9	chr3	-	5683	25	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	104848.9888166465	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	233	4756	10.0	-13	True	AATAAA	-20
PB.8146.5	chr3	-	5675	26	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	15	-38	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	105223.5650907153	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	263	4786	80.0	4	True	NA	NA
PB.8146.6	chr3	-	5583	24	incomplete-splice_match	DCAF1	ENST00000423656.5	5946	25	-1	1974	-1	1	3prime_fragment	FALSE	canonical	0	0	junction_15	98082.30015554998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	132	4655	10.0	-12	True	AATAAA	-21
PB.8146.7	chr3	-	5697	25	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	10	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	104994.769506496	NA	1	NA	TRUE	NA	NA	NA	C	coding	1507	4524	246	4769	10.0	-1	True	AATAAA	-21
PB.8146.1	chr3	-	5958	25	full-splice_match	DCAF1	ENST00000423656.5	5946	25	-14	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_16	101062.658741956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	145	4668	0.0	-25	True	AATAAA	-18
PB.8146.2	chr3	-	5609	25	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	-11	-38	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	100902.64480634256	NA	0	NA	TRUE	NA	NA	NA	C	coding	1507	4524	197	4720	80.0	-30	True	NA	NA
PB.8146.3	chr3	-	5808	26	novel_not_in_catalog	DCAF1	novel	5946	25	NA	NA	-45	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	105917.82403769442	NA	1	NA	TRUE	NA	NA	NA	C	coding	1507	4524	356	4879	5.0	5591	False	AATAAA	-22
PB.7068.27	chr2	-	3075	13	novel_in_catalog	NCL	novel	4034	14	NA	NA	100	0	intron_retention	FALSE	canonical	1	4460275	junction_6	1436115.7024710788	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	142	1668	20.0	-11	True	NA	NA
PB.11114.2	chr8	-	3659	12	novel_not_in_catalog	SLC20A2	novel	3657	11	NA	NA	10	-2	any annotated donor/acceptor	FALSE	canonical	1	9622	junction_2	105150.68193653815	NA	1	NA	TRUE	NA	NA	NA	B	coding	612	1839	299	2137	20.0	571	False	AATAAA	-14
PB.11114.3	chr8	-	3621	10	novel_in_catalog	SLC20A2	novel	3657	11	NA	NA	-39	-2	no_combination_of_known_junctions	FALSE	canonical	1	5503	junction_8	95895.65927546743	NA	1	NA	TRUE	NA	NA	NA	B	coding	605	1818	478	2295	20.0	392	False	AATAAA	-14
PB.11114.4	chr8	-	2675	11	novel_in_catalog	SLC20A2	novel	3657	11	NA	NA	-39	-100	no_combination_of_known_junctions	FALSE	canonical	1	106835	junction_10	58809.35078879888	NA	0	NA	TRUE	NA	NA	NA	B	coding	652	1959	478	2436	25.0	392	False	ATTAAA	-16
PB.11114.5	chr8	-	4185	3	novel_not_in_catalog	SLC20A2	novel	3657	11	NA	NA	-29	5306	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	18547.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	402	False	AATAAA	-24
PB.7719.7	chr22	+	3931	32	full-splice_match	SFI1	ENST00000432498.5	4162	32	227	4	-17	0	multi-exon	FALSE	canonical	1	31464	junction_11	48938.194816460695	NA	0	NA	TRUE	NA	NA	NA	C	coding	1211	3636	167	3802	25.0	-34	True	ATTAAA	-14
PB.7719.6	chr22	+	3781	31	novel_in_catalog	DRG1	novel	338	4	NA	NA	-11786	87913	no_combination_of_known_junctions	FALSE	canonical	1	26753	junction_2	45060.17786892201	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	170	3652	25.0	-37	True	ATTAAA	-14
PB.7719.5	chr22	+	3773	31	novel_in_catalog	DRG1	novel	338	4	NA	NA	-11793	87913	no_combination_of_known_junctions	TRUE	canonical	1	2128	junction_15	51836.625650681475	NA	2	1	TRUE	NA	NA	NA	C	coding	1155	3468	177	3644	25.0	-44	True	ATTAAA	-14
PB.7719.4	chr22	+	3998	33	novel_not_in_catalog	DRG1	novel	338	4	NA	NA	-11794	87912	any annotated donor/acceptor	FALSE	canonical	1	2496	junction_21	50507.541910064036	NA	3	NA	TRUE	NA	NA	NA	C	coding	1230	3693	178	3870	25.0	-45	True	ATTAAA	-13
PB.7719.3	chr22	+	4902	31	novel_in_catalog	DRG1	novel	338	4	NA	NA	-11800	87913	intron_retention	FALSE	canonical	1	64874	junction_3	43257.48072544473	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	184	3111	25.0	-51	True	ATTAAA	-14
PB.7719.2	chr22	+	4047	33	full-splice_match	SFI1	ENST00000400288.6	4002	33	-82	37	17	1	multi-exon	FALSE	canonical	1	54187	junction_3	44475.5550446236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1242	3729	188	3916	25.0	-55	True	ATTAAA	-16
PB.7719.1	chr22	+	3959	32	novel_in_catalog	DRG1	novel	338	4	NA	NA	-11783	87920	no_combination_of_known_junctions	FALSE	canonical	1	64874	junction_3	42555.496355469215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	167	3823	40.0	-34	True	ATTAAA	-21
PB.3362.6	chr14	+	2951	5	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	125	11081	any annotated donor/acceptor	FALSE	canonical	1	13	junction_3	1387.4880855344309	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-1	True	NA	NA
PB.9586.2	chr5	-	5253	28	full-splice_match	GEMIN5	ENST00000285873.7	5397	28	-10	154	-10	-154	multi-exon	FALSE	canonical	1	120997	junction_26	43394.18417911143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1508	4527	87	4613	20.0	-21	True	ACTAAA	-16
PB.9934.4	chr6	+	1872	6	novel_not_in_catalog	HMGA1	novel	2159	5	NA	NA	32	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	733786.7801195658	NA	3	1	TRUE	NA	NA	NA	C	coding	107	324	203	526	10.0	0	True	AATAAA	-19
PB.9934.5	chr6	+	1740	5	full-splice_match	HMGA1	ENST00000347617.10	1773	5	32	1	32	0	multi-exon	FALSE	canonical	1	188863	junction_1	607682.120634372	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	AATAAA	-19
PB.9934.6	chr6	+	1816	5	novel_not_in_catalog	HMGA1	novel	2159	5	NA	NA	409	0	any annotated donor/acceptor	FALSE	canonical	1	8779	junction_1	680219.01249083	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	147	470	10.0	-6	True	AATAAA	-19
PB.10491.5	chr7	+	1600	9	full-splice_match	STARD3NL	ENST00000009041.11	1728	9	126	2	-3	-1	multi-exon	FALSE	canonical	1	388141	junction_1	108471.89853360351	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	132	836	10.0	-24	True	ATTAAA	-14
PB.9934.1	chr6	+	1835	5	full-splice_match	HMGA1	ENST00000447654.5	2159	5	324	0	-7	0	multi-exon	FALSE	canonical	1	945123	junction_4	406506.11900645174	NA	1	1	TRUE	NA	NA	NA	C	coding	107	324	166	489	10.0	-11	True	AATAAA	-19
PB.9934.2	chr6	+	1985	5	full-splice_match	HMGA1	ENST00000478214.1	716	5	-191	-1078	140	-1	multi-exon	FALSE	canonical	1	885216	junction_2	483780.88841178914	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8752	False	AATAAA	-18
PB.9934.3	chr6	+	1774	5	novel_in_catalog	HMGA1	novel	2159	5	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	1	188863	junction_1	614186.7072389307	NA	1	1	TRUE	NA	NA	NA	C	coding	107	324	105	428	10.0	-1	True	AATAAA	-19
PB.6565.3	chr2	-	1998	11	novel_in_catalog	RTKN	novel	2646	13	NA	NA	32	-20	no_combination_of_known_junctions	FALSE	canonical	1	11036	junction_2	100933.20572517252	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	239	1207	0.0	1	True	ATTAAA	-42
PB.1129.15	chr1	-	2928	20	novel_not_in_catalog	EPRS	novel	5014	32	NA	NA	-49	-4	any annotated donor/acceptor	FALSE	canonical	1	73	junction_19	253963.57491395256	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2664	265	2928	70.0	92	False	NA	NA
PB.2130.4	chr11	+	2846	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	66	1395	-12	-1395	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	162	1049	25.0	-3	True	AATAGA	-24
PB.6565.1	chr2	-	3922	12	novel_not_in_catalog	RTKN	novel	2646	13	NA	NA	66	1687	intron_retention	FALSE	canonical	1	1742	junction_1	106639.18758990387	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	205	1437	25.0	35	True	TATAAA	-33
PB.6683.2	chr2	-	4475	10	full-splice_match	SEPT10	ENST00000415095.5	1605	10	-58	-2812	22	-4	multi-exon	FALSE	canonical	1	31094	junction_2	26953.2440572536	NA	2	NA	TRUE	NA	NA	NA	C	coding	450	1353	67	1419	35.0	67	True	AATAAA	-36
PB.6683.3	chr2	-	4477	9	novel_in_catalog	SEPT10	novel	3091	12	NA	NA	-23	0	intron_retention	FALSE	canonical	1	14259	junction_8	36691.5220178228	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	134	1417	30.0	0	True	AATAAA	-40
PB.8640.6	chr3	+	2877	16	novel_not_in_catalog	LMLN	novel	2010	17	NA	NA	9	589	intron_retention	FALSE	canonical	1	2004	junction_7	11630.477197432614	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	16	1944	75.0	-2	True	NA	NA
PB.1410.2	chr10	-	3127	1	antisense	novelGene_BEND3P1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.1410.1	chr10	-	4426	1	antisense	novelGene_BEND3P1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	163	492	244	735	20.0	NA	False	NA	NA
PB.9058.4	chr4	-	5927	38	full-splice_match	DDX60	ENST00000393743.7	6071	38	53	91	50	-91	multi-exon	FALSE	canonical	1	52704	junction_37	32585.584846540478	NA	1	1	TRUE	NA	NA	NA	C	coding	1712	5139	240	5378	65.0	-3	True	AGTAAA	-39
PB.6683.6	chr2	-	2759	10	full-splice_match	SEPT10	ENST00000397714.6	2719	10	-40	0	-30	0	multi-exon	FALSE	canonical	1	14259	junction_9	34598.188851477025	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	141	1436	30.0	-7	True	AATAAA	-40
PB.7068.28	chr2	-	2481	14	full-splice_match	NCL	ENST00000322723.8	4034	14	110	1443	-105	-66	multi-exon	FALSE	canonical	1	4460275	junction_7	1417435.3388719882	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	132	2264	25.0	-1	True	TATAAA	-27
PB.11162.1	chr8	-	2998	13	full-splice_match	PDE7A	ENST00000401827.7	3673	13	501	174	57	-174	multi-exon	FALSE	canonical	1	137296	junction_9	99096.81053825177	NA	0	NA	TRUE	NA	NA	NA	A	coding	418	1257	136	1392	25.0	4	True	AATAAA	-16
PB.11713.1	chr9	-	556	5	full-splice_match	TXN	ENST00000374517.5	869	5	104	209	-70	-1	multi-exon	FALSE	canonical	1	1673078	junction_1	2605518.933578012	NA	0	NA	TRUE	NA	NA	NA	A	coding	105	318	102	419	35.0	-1	True	AATAAA	-22
PB.9692.1	chr6	-	1664	11	full-splice_match	GMDS	ENST00000380815.4	1752	11	88	0	88	0	multi-exon	FALSE	canonical	1	215658	junction_10	124554.98780795572	NA	0	NA	TRUE	NA	NA	NA	A	coding	372	1119	183	1301	20.0	0	True	ATTAAA	-24
PB.11646.10	chr9	-	4515	34	full-splice_match	IARS	ENST00000375643.7	4656	34	5	136	0	2	multi-exon	FALSE	canonical	1	244110	junction_33	331372.18413714215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1262	3789	263	4051	40.0	-1	True	AATAAA	-14
PB.3389.4	chr14	-	2493	15	incomplete-splice_match	RALGAPA1	ENST00000553892.2	6271	41	-414	174540	-23	5289	3prime_fragment	FALSE	canonical	1	15	junction_8	20037.164145147683	NA	6	NA	TRUE	NA	NA	NA	C	coding	693	2079	415	2493	70.0	25	True	NA	NA
PB.3389.5	chr14	-	2191	13	incomplete-splice_match	RALGAPA1	ENST00000553892.2	6271	41	-466	179861	3	-32	3prime_fragment	FALSE	canonical	1	15	junction_6	20902.08255756004	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1725	467	2191	65.0	18	False	NA	NA
PB.831.7	chr1	-	2280	4	full-splice_match	ISG20L2	ENST00000368219.1	2310	4	354	-324	-4	324	multi-exon	FALSE	canonical	1	108041	junction_3	188888.98985794687	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	149	1210	90.0	-1	True	NA	NA
PB.3389.1	chr14	-	7871	40	full-splice_match	RALGAPA1	ENST00000307138.10	7911	40	31	9	31	-4	multi-exon	FALSE	canonical	0	0	junction_24	14989.150540914537	NA	6	NA	TRUE	NA	NA	NA	C	coding	2083	6252	439	6690	20.0	1	True	AATAAA	-16
PB.3389.3	chr14	-	7953	41	full-splice_match	RALGAPA1	ENST00000389698.7	7864	41	-94	5	-16	0	multi-exon	TRUE	canonical	0	0	junction_25	14113.68141024871	NA	1	NA	TRUE	NA	NA	NA	C	coding	2036	6111	486	6596	20.0	-1	True	AATAAA	-20
PB.9064.10	chr4	+	3730	13	full-splice_match	CLCN3	ENST00000513761.5	6692	13	274	2688	243	440	multi-exon	FALSE	canonical	1	228621	junction_5	82839.93200087576	NA	9	1	TRUE	NA	NA	NA	C	coding	818	2457	286	2742	45.0	98	False	AATAAA	-20
PB.9064.11	chr4	+	5812	13	novel_in_catalog	CLCN3	novel	582	5	NA	NA	5	0	intron_retention	FALSE	canonical	1	1044	junction_1	126527.19862334826	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	166	2622	15.0	-44	True	ATTAAA	-16
PB.9064.12	chr4	+	3107	13	full-splice_match	CLCN3	ENST00000513761.5	6692	13	13	3572	5	-177	multi-exon	FALSE	canonical	1	228621	junction_5	82839.93200087576	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	547	3003	75.0	-44	True	NA	NA
PB.9064.13	chr4	+	2930	13	full-splice_match	CLCN3	ENST00000513761.5	6692	13	13	3749	5	-354	multi-exon	FALSE	canonical	1	228621	junction_5	82839.93200087576	NA	6	NA	TRUE	NA	NA	NA	C	coding	794	2382	547	2928	55.0	-44	True	NA	NA
PB.9064.14	chr4	+	3053	11	incomplete-splice_match	CLCN3	ENST00000347613.8	3635	14	23	12906	-3	751	3prime_fragment	FALSE	canonical	1	228621	junction_5	90107.05475072416	NA	1	NA	TRUE	NA	NA	NA	C	coding	737	2214	532	2745	50.0	-29	True	AATAAA	-14
PB.9064.15	chr4	+	6313	14	novel_not_in_catalog	CLCN3	novel	582	5	NA	NA	4	0	intron_retention	FALSE	canonical	1	5274	junction_3	150325.13339149774	NA	6	NA	TRUE	NA	NA	NA	C	coding	760	2283	845	3127	15.0	-22	True	ATTAAA	-12
PB.9064.16	chr4	+	6309	14	novel_not_in_catalog	CLCN3	novel	582	5	NA	NA	33	0	intron_retention	FALSE	canonical	1	4949	junction_2	149556.2958578142	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	667	3123	15.0	7	True	ATTAAA	-12
PB.9064.17	chr4	+	3525	12	full-splice_match	CLCN3	ENST00000613795.4	5874	12	149	2200	149	442	multi-exon	FALSE	canonical	1	131041	junction_1	103337.90880167903	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	160	2535	40.0	5	True	AATAAA	-22
PB.9064.18	chr4	+	3804	12	full-splice_match	CLCN3	ENST00000613795.4	5874	12	117	1953	117	689	multi-exon	FALSE	canonical	1	131041	junction_1	103337.90880167903	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	192	2567	35.0	-7889	False	ATTAAA	-35
PB.9064.19	chr4	+	5861	13	novel_in_catalog	CLCN3	novel	582	5	NA	NA	83	-2	intron_retention	FALSE	canonical	1	50478	junction_12	146704.91801818446	NA	3	NA	TRUE	NA	NA	NA	C	coding	839	2520	226	2745	15.0	0	True	ATTAAA	-10
PB.4494.1	chr16	-	2690	1	incomplete-splice_match	RANBP10	ENST00000317506.7	5341	14	80892	5	80758	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-6445	False	ATTAAA	-17
PB.11789.17	chr9	-	1773	8	full-splice_match	HSPA5	ENST00000324460.6	3908	8	-12	2147	-12	-2147	multi-exon	FALSE	canonical	1	2174427	junction_2	999659.513985494	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1557	217	1773	65.0	0	True	NA	NA
PB.3594.4	chr14	-	2205	13	full-splice_match	SNW1	ENST00000555761.5	1855	13	0	-350	0	-4	multi-exon	FALSE	canonical	1	243148	junction_3	143264.06347739673	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	30	1745	40.0	-1	True	AATAAA	-12
PB.3594.5	chr14	-	2027	13	novel_in_catalog	SNW1	novel	2163	14	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	33169	junction_3	192441.02529135387	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	29	1321	40.0	0	True	AATAAA	-12
PB.8257.7	chr3	+	2668	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	106	-888	-8	-4	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	184	1179	35.0	-7888	False	AATAAA	-20
PB.8257.6	chr3	+	1483	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	2	401	2	17	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	288	1283	40.0	-5	True	AAGAAA	-16
PB.8257.1	chr3	+	3193	10	full-splice_match	ST3GAL6	ENST00000483910.5	1886	10	175	-1482	-20	-1	multi-exon	FALSE	canonical	1	25999	junction_1	46759.95382565917	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	115	1110	40.0	-7819	False	NA	NA
PB.3594.1	chr14	-	3893	12	novel_in_catalog	SNW1	novel	2163	14	NA	NA	13	-4	intron_retention	FALSE	canonical	1	243148	junction_3	147213.50041368348	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	2321	3433	40.0	13	True	AATAAA	-12
PB.3594.2	chr14	-	3848	13	novel_in_catalog	SNW1	novel	2163	14	NA	NA	13	-4	intron_retention	FALSE	canonical	1	243148	junction_4	159301.74831999038	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	2356	3363	40.0	-22	False	AATAAA	-12
PB.3594.3	chr14	-	2117	14	full-splice_match	SNW1	ENST00000261531.11	2163	14	42	4	7	-4	multi-exon	FALSE	canonical	1	243148	junction_4	156102.7595826339	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	22	1632	40.0	7	True	AATAAA	-12
PB.2351.1	chr11	-	3340	9	novel_in_catalog	FEZ1	novel	4744	12	NA	NA	6	-1	intron_retention	FALSE	canonical	1	321227	junction_8	118638.2110256193	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	197	1249	20.0	-7	True	AATAAA	-15
PB.2351.2	chr11	-	1711	10	full-splice_match	FEZ1	ENST00000278919.7	1748	10	44	-7	11	-1	multi-exon	FALSE	canonical	1	321227	junction_9	116076.44545069915	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	192	1370	20.0	-2	True	AATAAA	-15
PB.2351.3	chr11	-	2283	2	full-splice_match	FEZ1	ENST00000366139.3	1053	2	-47	-1183	-7	1183	multi-exon	FALSE	canonical	1	321227	junction_1	0.0	NA	44	NA	TRUE	NA	NA	NA	C	coding	104	315	250	564	30.0	9	False	AATAAA	-13
PB.2351.4	chr11	-	1797	2	full-splice_match	FEZ1	ENST00000366139.3	1053	2	-16	-728	-16	728	multi-exon	FALSE	canonical	1	321227	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	219	533	0.0	40	False	NA	NA
PB.8257.8	chr3	+	2055	7	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	3	-169	combination_of_known_junctions	FALSE	canonical	1	3524	junction_6	55309.35637545122	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-4	True	NA	NA
PB.9298.15	chr5	-	2351	18	full-splice_match	COL4A3BP	ENST00000405807.9	2830	18	64	415	1	1	multi-exon	FALSE	canonical	1	68906	junction_8	76200.44469840905	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	431	2305	85.0	-16	True	NA	NA
PB.9298.14	chr5	-	2261	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	8	885	0	1	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	419	2215	85.0	-4	True	NA	NA
PB.9298.17	chr5	-	1870	2	full-splice_match	COL4A3BP	ENST00000647127.1	976	2	-434	-460	-1	460	multi-exon	FALSE	canonical	1	198962	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	120	363	428	790	90.0	-13	True	NA	NA
PB.9298.16	chr5	-	3798	16	full-splice_match	COL4A3BP	ENST00000646511.1	3056	16	6	-748	1	748	multi-exon	FALSE	canonical	1	198962	junction_15	46896.39091993707	NA	2	NA	TRUE	NA	NA	NA	C	coding	598	1797	426	2222	25.0	-11	True	AATAAA	-35
PB.9298.11	chr5	-	3918	16	novel_not_in_catalog	COL4A3BP	novel	1870	13	NA	NA	-3	37	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95254.36001840312	NA	17	2	TRUE	NA	NA	NA	C	coding	555	1668	422	2089	30.0	-7	True	AAAAAG	-16
PB.9298.10	chr5	-	4110	18	full-splice_match	COL4A3BP	ENST00000405807.9	2830	18	78	-1358	2	37	multi-exon	FALSE	canonical	1	68906	junction_8	76200.44469840905	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	417	2291	30.0	-2	True	AAAAAG	-16
PB.9298.13	chr5	-	2517	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	8	629	0	64	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	419	2215	30.0	-4	True	NA	NA
PB.9298.12	chr5	-	3798	17	full-splice_match	COL4A3BP	ENST00000645483.1	3154	17	4	-648	-4	-24	multi-exon	FALSE	canonical	1	198962	junction_16	46859.40058768891	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	423	2219	25.0	-8	True	TATAAA	-13
PB.11791.3	chr9	-	3382	12	full-splice_match	MAPKAP1	ENST00000265960.7	3395	12	12	1	9	-1	multi-exon	FALSE	canonical	1	542994	junction_5	162846.32319033664	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	322	1890	20.0	-15	True	AATAAA	-17
PB.2232.1	chr11	+	2988	3	full-splice_match	KDM4D	ENST00000335080.5	2978	3	0	-10	0	10	multi-exon	FALSE	canonical	1	14826	junction_2	1638.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	520	1563	842	2404	30.0	-52	True	ATTAAA	-34
PB.11791.1	chr9	-	3200	11	novel_in_catalog	MAPKAP1	novel	3252	11	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	14821	junction_6	283444.0742545344	NA	5	NA	TRUE	NA	NA	NA	C	coding	463	1392	316	1707	15.0	-9	True	AATAAA	-18
PB.11791.7	chr9	-	3130	10	novel_in_catalog	MAPKAP1	novel	3252	11	NA	NA	-8	-2	no_combination_of_known_junctions	FALSE	canonical	1	14127	junction_3	280823.1426779249	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	320	1639	15.0	-13	True	AATAAA	-16
PB.11791.6	chr9	-	3241	11	full-splice_match	MAPKAP1	ENST00000373511.6	3252	11	8	3	8	-2	multi-exon	FALSE	canonical	1	21407	junction_3	270006.1375392974	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	323	1750	15.0	-16	True	AATAAA	-16
PB.9162.8	chr5	-	4497	35	novel_not_in_catalog	DROSHA	novel	5305	35	NA	NA	-7	111	any annotated donor/acceptor	FALSE	canonical	1	68096	junction_34	115137.38702722767	NA	0	NA	TRUE	NA	NA	NA	C	coding	1357	4074	293	4366	20.0	-8	True	AATAAA	-18
PB.859.1	chr1	-	1060	4	full-splice_match	CD48	ENST00000368046.7	1126	4	60	6	12	-6	multi-exon	FALSE	canonical	1	1414675	junction_3	246024.30144330594	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	29	760	25.0	-1	True	AATAAA	-23
PB.8853.97	chr4	-	1760	5	novel_in_catalog	SEC31A	novel	4104	29	NA	NA	1	-11656	no_combination_of_known_junctions	FALSE	canonical	1	22494	junction_4	71265.5941755031	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	31	True	AATAAA	-10
PB.8853.96	chr4	-	1770	5	full-splice_match	THAP9-AS1	ENST00000504520.6	2770	5	451	549	-1	-13	multi-exon	FALSE	canonical	1	43463	junction_2	135154.28938693547	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-32	True	AATAAA	-10
PB.8853.95	chr4	-	2326	4	novel_not_in_catalog	SEC31A	novel	4104	29	NA	NA	7	-11656	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	169327.273627139	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	6	True	AATAAA	-10
PB.7644.7	chr22	-	2206	6	full-splice_match	PRAME	ENST00000402697.5	2057	6	-84	-65	-11	0	multi-exon	FALSE	canonical	1	105604	junction_5	219313.0747852485	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	312	1841	20.0	-110	False	AATAAA	-18
PB.8853.92	chr4	-	4869	3	full-splice_match	THAP9-AS1	ENST00000513581.5	683	3	25	-4211	15	-7	multi-exon	FALSE	canonical	1	104559	junction_1	147658.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	24	True	AATAAA	-16
PB.8853.91	chr4	-	6911	2	full-splice_match	THAP9-AS1	ENST00000503704.1	637	2	0	-6274	0	-4	multi-exon	FALSE	canonical	1	399876	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-19
PB.8853.90	chr4	-	4084	4	novel_in_catalog	SEC31A	novel	4104	29	NA	NA	-28	-11644	intron_retention	FALSE	canonical	1	104559	junction_2	122518.21326462265	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-29	False	AATAAA	-22
PB.859.3	chr1	-	3060	3	full-splice_match	CD48	ENST00000613788.1	1500	3	40	-1600	12	-76	multi-exon	FALSE	canonical	1	1414675	junction_2	279538.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	29	787	45.0	-1	True	NA	NA
PB.8853.99	chr4	-	1649	3	full-splice_match	THAP9-AS1	ENST00000512932.5	971	3	14	-692	14	-13	multi-exon	FALSE	canonical	1	50172	junction_1	174852.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	23	True	AATAAA	-10
PB.8853.98	chr4	-	1747	4	novel_in_catalog	SEC31A	novel	4104	29	NA	NA	0	-11656	no_combination_of_known_junctions	FALSE	canonical	1	30063	junction_1	159695.3486673923	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	AATAAA	-10
PB.8262.1	chr3	-	3244	2	full-splice_match	FILIP1L	ENST00000383694.3	3280	2	30	6	0	-1	multi-exon	FALSE	canonical	1	68041	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	893	2682	218	2899	20.0	-1	True	AGTAAA	-16
PB.6560.9	chr2	-	4991	7	novel_in_catalog	MOB1A	novel	4885	6	NA	NA	0	-72	combination_of_known_junctions	FALSE	canonical	1	9777	junction_5	553388.3875826573	NA	3	NA	TRUE	NA	NA	NA	C	coding	258	777	247	1023	50.0	-1	True	AATAAA	-14
PB.9848.2	chr6	+	3237	25	novel_in_catalog	ABCF1	novel	3481	25	NA	NA	0	38	combination_of_known_junctions	FALSE	canonical	1	330567	junction_3	157825.60477905118	NA	1	NA	TRUE	NA	NA	NA	C	coding	846	2541	47	2587	15.0	-9	True	NA	NA
PB.9848.3	chr6	+	3317	25	full-splice_match	ABCF1	ENST00000326195.12	3481	25	68	96	2	-96	multi-exon	FALSE	canonical	1	270275	junction_3	165857.6828842977	NA	1	NA	TRUE	NA	NA	NA	C	coding	845	2538	45	2582	10.0	-7	True	ACTAAA	-21
PB.12131.2	chrX	+	1619	2	full-splice_match	GJB1	ENST00000361726.6	1637	2	20	-2	20	0	multi-exon	FALSE	canonical	1	45351	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	127	978	15.0	2	True	ATTAAA	-20
PB.12131.1	chrX	+	1903	2	full-splice_match	GJB1	ENST00000361726.6	1637	2	57	-323	57	5	multi-exon	FALSE	canonical	1	45351	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	90	941	45.0	0	True	ATTAAA	-25
PB.7444.1	chr21	+	3725	1	novel_in_catalog	CU633967.1	novel	549	3	NA	NA	5	-28971	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.11646.14	chr9	-	4473	34	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	3	2	intron_retention	FALSE	canonical	1	33107	junction_3	387873.7396977223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1242	3729	281	4009	40.0	-19	True	AATAAA	-14
PB.11176.1	chr8	-	8427	23	full-splice_match	NCOA2	ENST00000452400.6	8447	23	-34	54	-34	-54	multi-exon	FALSE	canonical	1	52952	junction_22	44156.87088681062	NA	16	NA	TRUE	NA	NA	NA	C	coding	1464	4395	217	4611	45.0	377	False	AATAAA	-19
PB.11154.1	chr8	-	1313	9	full-splice_match	GGH	ENST00000260118.6	1607	9	310	-16	-59	10	multi-exon	FALSE	canonical	1	495845	junction_8	90092.64102777415	NA	0	NA	TRUE	NA	NA	NA	A	coding	318	957	94	1050	30.0	-58	True	AATAAA	-27
PB.8513.6	chr3	-	5031	15	full-splice_match	PHC3	ENST00000495893.6	12666	15	-3	7638	-1	-1	multi-exon	FALSE	canonical	1	110362	junction_14	52892.59553446445	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	36	3023	30.0	-18	True	ATTAAA	-16
PB.8513.7	chr3	-	5071	16	novel_in_catalog	PHC3	novel	913	4	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	24368	junction_8	73806.86280635124	NA	35	3	TRUE	NA	NA	NA	C	coding	1011	3036	29	3064	30.0	-11	True	ATTAAA	-15
PB.8513.4	chr3	-	2418	9	novel_not_in_catalog	PHC3	novel	913	4	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104503.2526548217	NA	1	1	TRUE	NA	NA	NA	C	coding	342	1029	70	1098	30.0	-1	True	AATAAA	-15
PB.8513.5	chr3	-	4817	14	novel_in_catalog	PHC3	novel	913	4	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	1	14484	junction_10	91325.56176467318	NA	2	1	TRUE	NA	NA	NA	C	coding	913	2742	59	2800	30.0	10	True	ATTAAA	-25
PB.8513.2	chr3	-	3822	16	novel_not_in_catalog	PHC3	novel	913	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	2585	junction_1	68391.97507648265	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	19	3006	30.0	-1	True	AATAAA	-16
PB.8513.3	chr3	-	2667	9	novel_not_in_catalog	PHC3	novel	913	4	NA	NA	-4	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	109260.81776848232	NA	5	1	TRUE	NA	NA	NA	C	coding	468	1407	12	1418	30.0	-8	True	AATAAA	-16
PB.9389.2	chr5	+	2784	2	intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1224	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	156	471	572	1042	20.0	7	True	NA	NA
PB.817.17	chr1	+	2002	10	novel_not_in_catalog	LMNA	novel	570	4	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	3551507.933177538	NA	1	1	TRUE	NA	NA	NA	C	coding	470	1413	209	1621	5.0	0	True	ATTAAA	-17
PB.4447.12	chr16	+	2069	15	full-splice_match	RSPRY1	ENST00000394420.8	3547	15	31	1447	11	-18	multi-exon	FALSE	canonical	1	63880	junction_1	75850.91030789092	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	403	2016	90.0	-11	True	NA	NA
PB.4447.13	chr16	+	2399	15	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	-7	-18	combination_of_known_junctions	FALSE	canonical	1	44443	junction_1	79873.37665138414	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	733	2346	90.0	-7	True	NA	NA
PB.4447.10	chr16	+	3618	16	novel_not_in_catalog	RSPRY1	novel	692	4	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	125748.46950844195	NA	4	1	TRUE	NA	NA	NA	C	coding	568	1707	416	2122	35.0	-20	True	AATAAA	-23
PB.4447.11	chr16	+	3340	15	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	44443	junction_1	79873.37665138414	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	744	2357	40.0	-18	True	AATAAA	-21
PB.5700.3	chr19	-	2355	5	novel_in_catalog	ICAM3	novel	2057	6	NA	NA	-5	0	intron_retention	FALSE	canonical	1	498672	junction_3	287798.8657807523	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	33	719	20.0	11	False	AATAAA	-16
PB.5700.2	chr19	-	2550	6	novel_in_catalog	ICAM3	novel	2057	6	NA	NA	4	0	intron_retention	TRUE	canonical	1	5188	junction_4	518315.94995732093	NA	8	NA	TRUE	NA	NA	NA	C	coding	151	456	459	914	20.0	0	True	AATAAA	-16
PB.9496.26	chr5	+	4076	13	full-splice_match	ANKHD1	ENST00000431508.5	4079	13	3	0	3	0	multi-exon	FALSE	canonical	1	273911	junction_9	112925.60963011594	NA	1	NA	TRUE	NA	NA	NA	C	coding	1197	3594	52	3645	20.0	-3296	False	AATAAA	-14
PB.5700.7	chr19	-	2260	5	novel_in_catalog	ICAM3	novel	2057	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	4818	junction_4	491359.9316977321	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	171	626	15.0	-15	True	AATAAA	-14
PB.9496.21	chr5	+	3395	22	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	-15	372	combination_of_known_junctions	FALSE	canonical	1	76261	junction_15	144524.12630965517	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3261	134	3394	55.0	2	True	NA	NA
PB.5700.5	chr19	-	1755	7	full-splice_match	ICAM3	ENST00000160262.9	1934	7	177	2	-5	0	multi-exon	TRUE	canonical	1	498672	junction_5	264103.2592545743	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	33	1676	20.0	11	False	AATAAA	-16
PB.5700.4	chr19	-	2062	6	novel_in_catalog	ICAM3	novel	2057	6	NA	NA	-9	0	intron_retention	FALSE	canonical	1	498672	junction_4	288641.3288079169	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	57	1163	20.0	-13	True	AATAAA	-16
PB.10959.2	chr8	+	5253	1	full-splice_match	AC004908.3	ENST00000610248.1	625	1	-4630	2	-4630	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	27	84	383	466	25.0	-41	False	ATTAAA	-21
PB.4589.2	chr16	-	1203	5	full-splice_match	GINS2	ENST00000253462.7	2673	5	-7	1477	-7	895	multi-exon	FALSE	canonical	1	257019	junction_4	103755.25639786883	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	109	666	15.0	-55	True	AATAAA	-15
PB.4589.1	chr16	-	1989	4	novel_in_catalog	GINS2	novel	2673	5	NA	NA	31	-855	intron_retention	FALSE	canonical	1	257019	junction_3	114747.44562734284	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	71	538	90.0	-17	True	NA	NA
PB.11646.15	chr9	-	4412	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	2	2	intron_retention	FALSE	canonical	1	8686	junction_14	419214.17476773687	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	90	2255	40.0	2	True	AATAAA	-14
PB.9496.28	chr5	+	2821	8	novel_in_catalog	ANKHD1	novel	7606	33	NA	NA	-1267	9713	no_combination_of_known_junctions	FALSE	canonical	1	184106	junction_5	162622.23452918517	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	204	2489	35.0	NA	False	AGTAAA	-6
PB.6210.26	chr19	+	2855	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	108	0	combination_of_known_junctions	FALSE	canonical	1	10540	junction_11	41618.06168907384	NA	2	1	TRUE	NA	NA	NA	B	coding	651	1956	250	2205	95.0	130	False	NA	NA
PB.6210.25	chr19	+	2919	15	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	2953	junction_8	46422.59156836755	NA	0	NA	TRUE	NA	NA	NA	B	coding	633	1902	368	2269	95.0	12	True	NA	NA
PB.6210.24	chr19	+	3144	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-10	206	any annotated donor/acceptor	FALSE	canonical	1	6209	junction_7	46638.22804076311	NA	1	NA	TRUE	NA	NA	NA	B	coding	351	1056	368	1423	70.0	12	True	NA	NA
PB.6210.23	chr19	+	3520	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-14	493	combination_of_known_junctions	FALSE	canonical	1	2953	junction_10	46812.7147075806	NA	2	NA	TRUE	NA	NA	NA	B	coding	479	1440	372	1811	25.0	8	True	NA	NA
PB.6210.22	chr19	+	2950	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-19	1	any annotated donor/acceptor	FALSE	canonical	1	311	junction_11	42844.33136439665	NA	4	1	TRUE	NA	NA	NA	B	coding	640	1923	377	2299	95.0	3	True	NA	NA
PB.6210.21	chr19	+	3366	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-19	493	any annotated donor/acceptor	FALSE	canonical	1	6209	junction_7	47708.79102061682	NA	1	1	TRUE	NA	NA	NA	B	coding	351	1056	377	1432	25.0	3	True	NA	NA
PB.6210.20	chr19	+	2503	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-22	2	any annotated donor/acceptor	FALSE	canonical	1	6209	junction_7	45860.76832975605	NA	0	NA	TRUE	NA	NA	NA	B	coding	351	1056	380	1435	50.0	0	True	NA	NA
PB.9306.1	chr5	+	4793	1	antisense	novelGene_OTP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	CATAAA	-17
PB.6210.28	chr19	+	3502	1	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-344	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	B	coding	134	405	1857	2261	95.0	3524	False	NA	NA
PB.3393.1	chr14	+	3819	12	novel_not_in_catalog	MIPOL1	novel	732	5	NA	NA	-7266	-3028	any annotated donor/acceptor	FALSE	canonical	1	86	junction_11	26239.369887301877	NA	0	NA	TRUE	NA	NA	NA	A	coding	318	957	409	1365	20.0	NA	False	ATTAAA	-30
PB.11787.11	chr9	-	3084	7	full-splice_match	PPP6C	ENST00000373547.8	4118	7	15	1019	15	-1018	multi-exon	FALSE	canonical	1	582164	junction_6	176368.7410500606	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	86	1003	10.0	-18	True	NA	NA
PB.6362.2	chr2	+	1983	15	full-splice_match	HADHB	ENST00000537713.5	2142	15	159	0	12	0	multi-exon	FALSE	canonical	1	18711	junction_4	488529.626729343	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	93	1472	25.0	-32	True	AATAAA	-16
PB.5397.3	chr18	+	1289	1	full-splice_match	CHMP1B	ENST00000526991.2	3054	1	18	1747	18	-1648	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	196	591	108	698	35.0	0	True	AATAAA	-22
PB.3891.1	chr15	-	4329	22	full-splice_match	ZNF280D	ENST00000267807.11	4328	22	98	-99	3	-47	multi-exon	FALSE	canonical	1	70708	junction_5	64056.04319475804	NA	1	NA	TRUE	NA	NA	NA	C	coding	966	2901	159	3059	30.0	17	True	ATTAAA	-12
PB.3891.2	chr15	-	4237	22	full-splice_match	ZNF280D	ENST00000267807.11	4328	22	98	-7	3	7	multi-exon	FALSE	canonical	1	70708	junction_5	64056.04319475804	NA	1	NA	TRUE	NA	NA	NA	C	coding	966	2901	159	3059	30.0	17	True	AATAAA	-17
PB.3891.3	chr15	-	3147	22	full-splice_match	ZNF280D	ENST00000267807.11	4328	22	-13	1194	-13	-223	multi-exon	FALSE	canonical	1	70708	junction_5	64056.04319475804	NA	7	1	TRUE	NA	NA	NA	C	coding	959	2877	270	3146	65.0	1	True	NA	NA
PB.3891.4	chr15	-	3501	20	novel_in_catalog	ZNF280D	novel	3528	14	NA	NA	-14	6	no_combination_of_known_junctions	FALSE	canonical	1	6283	junction_1	71626.622875573	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	212	2662	30.0	-5	True	AATAAA	-20
PB.3891.5	chr15	-	3455	1	full-splice_match	AC090517.2	ENST00000614966.1	680	1	-2862	87	-2862	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	171	516	2	517	40.0	156	False	NA	NA
PB.5397.4	chr18	+	3030	1	full-splice_match	CHMP1B	ENST00000526991.2	3054	1	18	6	18	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	196	591	108	698	20.0	0	True	ATTAAA	-15
PB.9893.5	chr6	-	3254	16	novel_in_catalog	TNXB	novel	372	2	NA	NA	-12901	-17099	intron_retention	FALSE	canonical	1	611582	junction_6	130447.3691234387	NA	1	NA	TRUE	NA	NA	NA	B	coding	622	1869	29	1897	25.0	7	True	AATAAA	-13
PB.9893.6	chr6	-	2621	18	full-splice_match	ATF6B	ENST00000453203.2	2532	18	-12	-77	-7	-11	multi-exon	FALSE	canonical	1	53317	junction_4	223900.9640159691	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	23	1906	25.0	13	True	AATAAA	-13
PB.9893.7	chr6	-	1351	8	full-splice_match	ATF6B	ENST00000495579.5	1176	8	-13	-162	5	162	multi-exon	FALSE	canonical	1	616234	junction_7	104391.23951456729	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	29	985	70.0	7	True	NA	NA
PB.9893.1	chr6	-	2612	18	full-splice_match	ATF6B	ENST00000375203.7	2620	18	5	3	5	-3	multi-exon	FALSE	canonical	1	611582	junction_8	135668.20169115064	NA	21	3	TRUE	NA	NA	NA	C	coding	703	2112	29	2140	10.0	7	True	AATAAA	-21
PB.9893.3	chr6	-	2748	17	novel_in_catalog	TNXB	novel	372	2	NA	NA	-12902	-17095	intron_retention	FALSE	canonical	1	611582	junction_7	126465.42097867109	NA	0	NA	TRUE	NA	NA	NA	B	coding	622	1869	30	1898	20.0	6	True	AATAAA	-17
PB.9893.8	chr6	-	2529	2	novel_not_in_catalog	ATF6B	novel	2620	18	NA	NA	4	1174	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	6	True	NA	NA
PB.11736.9	chr9	+	3874	14	full-splice_match	PRPF4	ENST00000374199.8	3212	14	328	-990	29	990	multi-exon	FALSE	canonical	1	319146	junction_1	52511.986912879824	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	74	1639	30.0	13	True	AATGAA	-23
PB.6155.4	chr19	-	3204	2	full-splice_match	NUP62	ENST00000422090.2	3479	2	271	4	2	-4	multi-exon	FALSE	canonical	1	193034	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	226	1794	40.0	1	True	AATAAA	-15
PB.11646.1	chr9	-	4666	34	full-splice_match	IARS	ENST00000375643.7	4656	34	-14	4	2	0	multi-exon	FALSE	canonical	1	244110	junction_33	331372.18413714215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1262	3789	282	4070	40.0	5168	False	AATAAA	-11
PB.974.1	chr1	+	2699	1	incomplete-splice_match	CACNA1E	ENST00000367570.5	9724	47	315299	3	22778	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	141	426	74	499	25.0	-6079	False	AATAAA	-21
PB.1571.1	chr10	-	814	8	full-splice_match	EXOSC1	ENST00000370902.7	923	8	12	97	1	5	multi-exon	FALSE	canonical	1	477070	junction_6	160687.75767167524	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	21	608	55.0	-14	True	AATAAA	-21
PB.1571.2	chr10	-	1936	2	full-splice_match	EXOSC1	ENST00000489158.1	2113	2	-10	187	1	-187	multi-exon	FALSE	canonical	1	513297	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-25	True	NA	NA
PB.2663.6	chr12	+	2542	6	incomplete-splice_match	CDK2	ENST00000266970.8	2296	7	31	-4	0	4	intron_retention	FALSE	canonical	1	545750	junction_5	87294.80514532351	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	210	1082	10.0	4	True	ATTAAA	-25
PB.2663.7	chr12	+	2430	1	novel_in_catalog	CDK2	novel	2296	7	NA	NA	3	-651	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	39	120	207	326	75.0	7	True	NA	NA
PB.2663.4	chr12	+	3492	1	novel_in_catalog	CDK2	novel	2296	7	NA	NA	-3	405	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	39	120	213	332	100.0	1	True	NA	NA
PB.2663.5	chr12	+	2242	4	full-splice_match	CDK2	ENST00000554619.5	1802	4	-35	-405	-1	405	multi-exon	FALSE	canonical	1	605321	junction_3	72572.05469508677	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	1213	1767	100.0	3	True	NA	NA
PB.2663.2	chr12	+	1975	7	full-splice_match	CDK2	ENST00000266970.8	2296	7	324	-3	-187	3	multi-exon	FALSE	canonical	1	545750	junction_5	211415.86424975828	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	187	813	10.0	-7045	False	ATTAAA	-24
PB.2663.3	chr12	+	2411	8	full-splice_match	CDK2	ENST00000553376.5	1725	8	-26	-660	-5	-3	multi-exon	FALSE	canonical	1	610	junction_5	393387.64349808905	NA	3	NA	TRUE	NA	NA	NA	C	coding	346	1041	215	1255	15.0	-1	True	ATTAAA	-18
PB.2663.1	chr12	+	1397	7	full-splice_match	CDK2	ENST00000266970.8	2296	7	21	878	9	-6	multi-exon	FALSE	canonical	1	545750	junction_5	211415.86424975828	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	220	1116	40.0	-6	True	TATAAA	-10
PB.6874.1	chr2	+	4050	7	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	-8	980	intron_retention	FALSE	canonical	1	645	junction_6	28964.362629886324	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	1085	1468	50.0	-6	True	AATACA	-9
PB.6874.2	chr2	+	3973	6	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	-8	410	intron_retention	FALSE	canonical	1	20556	junction_1	24327.609733798345	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	1085	1468	30.0	-6	True	AGTAAA	-18
PB.6874.3	chr2	+	3709	5	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	-8	411	intron_retention	FALSE	canonical	1	47065	junction_1	15940.858367729135	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	820	1203	30.0	-6	True	AGTAAA	-19
PB.6874.4	chr2	+	2713	4	full-splice_match	TTN-AS1	ENST00000585487.5	755	4	-85	-1873	-8	1542	multi-exon	FALSE	canonical	1	47065	junction_1	16339.279196667969	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	820	1203	85.0	-6	True	NA	NA
PB.6874.5	chr2	+	2977	5	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	-7	1542	intron_retention	FALSE	canonical	1	20556	junction_1	27196.688180732595	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	1084	1467	85.0	-5	True	NA	NA
PB.2663.8	chr12	+	2517	6	full-splice_match	CDK2	ENST00000555408.5	2598	6	484	-403	4	4	multi-exon	FALSE	canonical	1	545750	junction_4	220902.98602182814	NA	4	NA	TRUE	NA	NA	NA	C	coding	208	627	728	1354	10.0	0	True	ATTAAA	-25
PB.2663.9	chr12	+	2872	5	novel_in_catalog	CDK2	novel	2296	7	NA	NA	-3	4	intron_retention	FALSE	canonical	1	28520	junction_3	412906.63485768787	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	1185	1709	10.0	-3	True	ATTAAA	-25
PB.9308.10	chr5	-	2972	1	novel_in_catalog	AP3B1	novel	5838	27	NA	NA	27494	4191	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-13
PB.3820.10	chr15	-	3347	17	incomplete-splice_match	TP53BP1	ENST00000572085.5	5574	23	-10	17423	5	4	3prime_fragment	FALSE	canonical	1	141913	junction_16	44257.871177763394	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3222	124	3345	65.0	-12	False	NA	NA
PB.2718.1	chr12	-	2417	2	full-splice_match	FAM19A2	ENST00000547075.1	427	2	-1931	-59	-800	59	multi-exon	FALSE	canonical	1	19015	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	219	660	263	922	25.0	-46	False	ATTAAA	-13
PB.9159.19	chr5	+	3149	2	incomplete-splice_match	PURPL	ENST00000512067.5	1610	3	9	7682	-6	-6722	3prime_fragment	FALSE	canonical	1	49009	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.9159.18	chr5	+	2973	2	incomplete-splice_match	PURPL	ENST00000512067.5	1610	3	-7	7874	-7	-6914	3prime_fragment	FALSE	canonical	1	49009	junction_1	0.0	NA	11	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-16	True	NA	NA
PB.10338.34	chr6	-	5806	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-8	6	any annotated donor/acceptor	FALSE	canonical	1	49	junction_18	124884.94422641737	NA	4	NA	TRUE	NA	NA	NA	C	coding	1208	3627	146	3772	20.0	-1	True	AATAAA	-19
PB.9159.13	chr5	+	4565	5	novel_not_in_catalog	PURPL	novel	1610	3	NA	NA	-8	2712	any annotated donor/acceptor	FALSE	canonical	1	5516	junction_3	17383.04510866839	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-17	True	AATAAA	-27
PB.9159.12	chr5	+	1950	4	incomplete-splice_match	PURPL	ENST00000505775.5	946	6	-24	8004	-9	168	3prime_fragment	FALSE	canonical	1	8385	junction_2	17961.676443658223	NA	3	NA	TRUE	NA	NA	NA	C	coding	100	303	239	541	5.0	-18	True	TTTAAA	-44
PB.9159.11	chr5	+	2472	3	novel_not_in_catalog	PURPL	novel	1610	3	NA	NA	-9	-7026	intron_retention	FALSE	canonical	1	8875	junction_2	20067.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-18	True	NA	NA
PB.9159.10	chr5	+	2726	3	novel_in_catalog	PURPL	novel	1610	3	NA	NA	-8	-38	intron_retention	FALSE	canonical	1	14066	junction_2	17471.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-17	True	AGTAAA	-30
PB.9159.17	chr5	+	5876	1	genic	PURPL	novel	NA	NA	NA	NA	-7	-7026	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-16	True	NA	NA
PB.9159.16	chr5	+	3850	3	novel_in_catalog	PURPL	novel	1610	3	NA	NA	-7	127	intron_retention	FALSE	canonical	1	14066	junction_2	17471.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-16	True	AATACA	-19
PB.9159.15	chr5	+	2862	2	incomplete-splice_match	PURPL	ENST00000512067.5	1610	3	-8	7986	-8	-7026	3prime_fragment	FALSE	canonical	1	49009	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-17	True	NA	NA
PB.9159.14	chr5	+	5607	1	genic	PURPL	novel	NA	NA	NA	NA	-8	-7296	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-17	True	NA	NA
PB.1964.26	chr11	+	5150	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-89	intron_retention	FALSE	canonical	1	263820	junction_2	442265.15617280995	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	3275	3649	65.0	0	True	NA	NA
PB.1964.27	chr11	+	2374	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	12	no_combination_of_known_junctions	FALSE	canonical	1	3176	junction_4	472800.7836166941	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	116	772	15.0	0	True	AATAAA	-38
PB.1964.24	chr11	+	2650	9	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-89	combination_of_known_junctions	FALSE	canonical	1	15613	junction_3	446418.2948309067	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	247	1149	65.0	4	True	NA	NA
PB.1964.25	chr11	+	2507	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	41	783	-1	-89	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	113	1006	65.0	3	True	NA	NA
PB.1964.22	chr11	+	3257	7	full-splice_match	MS4A1	ENST00000532073.5	2560	7	0	-697	0	3	multi-exon	FALSE	canonical	1	26330	junction_5	424672.89492714923	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	116	970	25.0	0	True	AATAAA	-23
PB.1964.23	chr11	+	2821	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-2	intron_retention	FALSE	canonical	1	26330	junction_6	457158.2653807751	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	379	1233	40.0	0	True	AATAAA	-24
PB.1964.20	chr11	+	3547	7	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	275	intron_retention	FALSE	canonical	1	263820	junction_2	414898.5730157097	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	2237	2848	70.0	0	True	NA	NA
PB.1964.21	chr11	+	3385	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	3	no_combination_of_known_junctions	FALSE	canonical	1	4467	junction_2	443764.28668634983	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	205	1098	25.0	0	True	AATAAA	-23
PB.6338.29	chr2	-	5114	21	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	-60	73	any annotated donor/acceptor	FALSE	canonical	1	19552	junction_20	234242.2857354058	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	120	3320	25.0	1342	False	GATAAA	-14
PB.5344.9	chr17	-	1773	10	full-splice_match	CSNK1D	ENST00000392334.6	2047	10	266	8	0	-8	multi-exon	FALSE	canonical	1	649219	junction_3	291258.5271426973	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	51	1280	40.0	-1	True	NA	NA
PB.1964.29	chr11	+	1671	7	full-splice_match	MS4A1	ENST00000532073.5	2560	7	0	889	0	277	multi-exon	FALSE	canonical	1	26330	junction_5	424672.89492714923	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	116	970	70.0	0	True	NA	NA
PB.3186.5	chr13	+	5137	12	incomplete-splice_match	TDRD3	ENST00000535286.5	2579	14	-95	35793	-95	-1	3prime_fragment	FALSE	canonical	1	43915	junction_1	44735.800140730746	NA	29	NA	TRUE	NA	NA	NA	C	coding	719	2160	168	2327	35.0	-156	False	AATAAA	-17
PB.3186.4	chr13	+	2077	11	incomplete-splice_match	TDRD3	ENST00000535286.5	2579	14	-105	44753	-105	288	3prime_fragment	FALSE	canonical	1	43915	junction_1	43801.52737017283	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1899	178	2076	55.0	-166	False	NA	NA
PB.3186.7	chr13	+	2709	15	novel_not_in_catalog	TDRD3	novel	3019	14	NA	NA	-54	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	61157.05728044869	NA	2	NA	TRUE	NA	NA	NA	C	coding	651	1956	491	2446	15.0	-115	False	AATAAA	-11
PB.3186.6	chr13	+	2654	14	full-splice_match	TDRD3	ENST00000535286.5	2579	14	-79	4	-79	2	multi-exon	FALSE	canonical	1	43915	junction_1	47520.54276357098	NA	2	NA	TRUE	NA	NA	NA	C	coding	744	2235	152	2386	10.0	-140	False	AATAAA	-19
PB.3186.1	chr13	+	2518	14	novel_in_catalog	TDRD3	novel	3019	14	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	1	9822	junction_1	49310.26982966688	NA	1	NA	TRUE	NA	NA	NA	C	coding	651	1956	295	2250	10.0	-15	True	AATAAA	-16
PB.3186.3	chr13	+	1606	11	incomplete-splice_match	TDRD3	ENST00000377881.6	2532	14	16	45056	16	-21	3prime_fragment	FALSE	canonical	1	43915	junction_1	43801.52737017283	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1590	16	1605	65.0	-4	True	AAGAAA	-37
PB.3719.2	chr14	-	2030	2	full-splice_match	IGHV1-69D	ENST00000624687.1	411	2	-2	-1617	-2	1617	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	61	423	35.0	8446	False	AATAAA	-29
PB.8788.2	chr4	+	2549	8	incomplete-splice_match	CEP135	ENST00000257287.4	5562	26	-169	66292	-59	491	3prime_fragment	FALSE	canonical	1	50921	junction_1	10997.162606225076	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	294	1364	70.0	-11	True	NA	NA
PB.10959.3	chr8	+	6226	1	full-splice_match	AC004908.3	ENST00000610248.1	625	1	-4648	-953	-4648	953	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	132	399	1	399	90.0	4	True	NA	NA
PB.11176.7	chr8	-	8717	22	novel_not_in_catalog	NCOA2	novel	8447	23	NA	NA	27925	-21	intron_retention	FALSE	canonical	1	8339	junction_21	49073.60500785651	NA	3	NA	TRUE	NA	NA	NA	C	coding	1464	4395	474	4868	30.0	701	False	AATAAA	-21
PB.11797.4	chr9	+	4055	24	novel_not_in_catalog	GARNL3	novel	905	11	NA	NA	-7	-1747	any annotated donor/acceptor	FALSE	canonical	1	2249	junction_1	16013.327922959737	NA	0	NA	TRUE	NA	NA	NA	B	coding	551	1656	525	2180	75.0	NA	False	NA	NA
PB.1665.5	chr10	+	5582	17	full-splice_match	FAM160B1	ENST00000369248.8	5810	17	16	212	-10	-212	multi-exon	FALSE	canonical	1	100182	junction_1	41920.228723685344	NA	1	NA	TRUE	NA	NA	NA	C	coding	765	2298	320	2617	35.0	-30	True	ATTAAA	-14
PB.1665.4	chr10	+	4235	17	full-splice_match	FAM160B1	ENST00000369248.8	5810	17	15	1560	-11	-757	multi-exon	FALSE	canonical	1	100182	junction_1	41920.228723685344	NA	5	NA	TRUE	NA	NA	NA	C	coding	765	2298	321	2618	80.0	-31	True	AAGAAA	-11
PB.1665.6	chr10	+	4994	17	full-splice_match	FAM160B1	ENST00000369248.8	5810	17	16	800	-10	3	multi-exon	FALSE	canonical	1	100182	junction_1	41920.228723685344	NA	1	NA	TRUE	NA	NA	NA	C	coding	765	2298	320	2617	15.0	-30	True	AATAAA	-33
PB.1665.1	chr10	+	5798	17	full-splice_match	FAM160B1	ENST00000369248.8	5810	17	8	4	8	-4	multi-exon	FALSE	canonical	1	100182	junction_1	41920.228723685344	NA	22	1	TRUE	NA	NA	NA	C	coding	765	2298	328	2625	25.0	-38	False	AATAAA	-16
PB.2234.4	chr11	+	2689	2	full-splice_match	ENDOD1	ENST00000278505.4	4687	2	27	1971	27	-1971	multi-exon	FALSE	canonical	1	175107	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	92	1594	70.0	-9	True	AATAAA	-27
PB.1665.3	chr10	+	3080	17	full-splice_match	FAM160B1	ENST00000369248.8	5810	17	17	2713	-9	-1910	multi-exon	FALSE	canonical	1	100182	junction_1	41920.228723685344	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	319	2616	60.0	-29	True	NA	NA
PB.1665.2	chr10	+	3655	17	full-splice_match	FAM160B1	ENST00000369248.8	5810	17	7	2148	7	-1345	multi-exon	FALSE	canonical	1	100182	junction_1	41920.228723685344	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	329	2626	30.0	-39	False	ATTAAA	-14
PB.2453.1	chr12	+	5215	15	full-splice_match	PHC1	ENST00000544916.5	3626	15	-62	-1527	-17	-5	multi-exon	FALSE	canonical	1	53	junction_11	6028.822168533081	NA	1	NA	TRUE	NA	NA	NA	C	coding	1004	3015	198	3212	45.0	-335	False	ATTAAA	-16
PB.2453.3	chr12	+	4037	15	full-splice_match	PHC1	ENST00000544916.5	3626	15	-45	-366	0	-103	multi-exon	FALSE	canonical	1	53	junction_11	6028.822168533081	NA	1	NA	TRUE	NA	NA	NA	C	coding	1004	3015	181	3195	15.0	-318	False	ATTAAA	-34
PB.2234.5	chr11	+	2805	2	full-splice_match	ENDOD1	ENST00000278505.4	4687	2	30	1852	30	-1852	multi-exon	FALSE	canonical	1	175107	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	89	1591	40.0	-6	True	ATTAAA	-18
PB.2453.4	chr12	+	5174	15	novel_in_catalog	PHC1	novel	618	6	NA	NA	0	-5	intron_retention	FALSE	canonical	1	53	junction_11	10695.060803798116	NA	6	1	TRUE	NA	NA	NA	C	coding	996	2991	181	3171	45.0	-318	False	ATTAAA	-16
PB.3155.1	chr13	-	3557	12	novel_in_catalog	SUCLA2	novel	3317	14	NA	NA	0	1820	combination_of_known_junctions	FALSE	canonical	1	13898	junction_1	189324.9134940266	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	37	1428	15.0	11	False	CATAAA	-13
PB.2234.2	chr11	+	6313	2	full-splice_match	ENDOD1	ENST00000278505.4	4687	2	14	-1640	14	1640	multi-exon	FALSE	canonical	1	175107	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	500	1503	105	1607	15.0	-22	True	NA	NA
PB.3155.3	chr13	-	2064	11	full-splice_match	SUCLA2	ENST00000646932.1	2111	11	-9	56	-3	17	multi-exon	FALSE	canonical	1	88067	junction_5	177362.31078851	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	14	1405	55.0	-10	True	AATAAA	-17
PB.3155.2	chr13	-	2798	12	novel_in_catalog	SUCLA2	novel	3317	14	NA	NA	0	1073	combination_of_known_junctions	FALSE	canonical	1	13898	junction_1	189324.9134940266	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	25	1416	5.0	-21	True	AATATA	-16
PB.1724.1	chr10	-	3939	18	full-splice_match	TUBGCP2	ENST00000368563.6	4218	18	272	7	-24	-7	multi-exon	FALSE	canonical	1	252323	junction_17	163753.88033651735	NA	19	NA	TRUE	NA	NA	NA	C	coding	902	2709	102	2810	30.0	-13	True	AGTAAA	-14
PB.3155.4	chr13	-	2188	12	novel_in_catalog	SUCLA2	novel	3317	14	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	5246	junction_6	198885.95869737814	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	44	883	10.0	4	True	AATAAA	-15
PB.1724.3	chr10	-	3222	18	full-splice_match	TUBGCP2	ENST00000368563.6	4218	18	-15	1011	-15	0	multi-exon	FALSE	canonical	1	252323	junction_17	163753.88033651735	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	389	3097	15.0	-14	True	TATAAA	-14
PB.1724.2	chr10	-	2784	17	novel_in_catalog	TUBGCP2	novel	3885	17	NA	NA	4	8	no_combination_of_known_junctions	FALSE	canonical	1	11188	junction_2	209194.91131803225	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	62	2650	15.0	27	True	TATAAA	-23
PB.1051.2	chr1	+	4550	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	19678	junction_6	191650.6123890845	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	393	2825	25.0	39	False	AATAAA	-18
PB.3280.4	chr13	+	1955	7	novel_in_catalog	UPF3A	novel	2387	10	NA	NA	20	-2	no_combination_of_known_junctions	FALSE	canonical	1	163	junction_1	22364.74016852321	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	239	1066	35.0	-440	False	AATAAA	-14
PB.2722.4	chr12	+	2047	2	incomplete-splice_match	RXYLT1	ENST00000536219.5	864	3	304	-598	20	598	5prime_fragment	FALSE	canonical	1	182471	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	AGTAAA	-10
PB.2722.5	chr12	+	1494	6	full-splice_match	RXYLT1	ENST00000537373.5	1966	6	21	451	21	7	multi-exon	FALSE	canonical	1	74838	junction_1	65059.48466011701	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	928	1479	40.0	1	True	AATAAA	-22
PB.2722.2	chr12	+	1927	6	full-splice_match	RXYLT1	ENST00000261234.10	1918	6	29	-38	-10	0	multi-exon	FALSE	canonical	1	109642	junction_1	52481.33446702742	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	130	1461	45.0	-314	False	NA	NA
PB.2722.3	chr12	+	2764	3	novel_in_catalog	RXYLT1	novel	1918	6	NA	NA	0	1122	intron_retention	FALSE	canonical	1	34341	junction_1	5151.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	2010	2402	70.0	2	True	NA	NA
PB.1051.4	chr1	+	5892	18	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-22	3	intron_retention	FALSE	canonical	1	4080	junction_1	198947.42928814102	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	1732	4164	30.0	9	True	AATAAA	-21
PB.2722.1	chr12	+	1351	6	full-splice_match	RXYLT1	ENST00000261234.10	1918	6	20	547	-19	-3	multi-exon	FALSE	canonical	1	109642	junction_1	52481.33446702742	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1212	139	1350	70.0	-323	False	AAAAAG	-19
PB.11929.17	chr9	-	2936	7	novel_in_catalog	DPH7	novel	1311	2	NA	NA	12	-1	intron_retention	FALSE	canonical	1	26628	junction_6	99355.05221175218	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	1777	2607	50.0	-24	True	ATTAAA	-12
PB.8260.28	chr3	-	4192	15	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	4	6	any annotated donor/acceptor	FALSE	canonical	1	938	junction_9	226692.39798062062	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	360	2597	20.0	9	True	AATAAA	-18
PB.2234.1	chr11	+	2063	2	full-splice_match	ENDOD1	ENST00000278505.4	4687	2	8	2616	8	-2616	multi-exon	FALSE	canonical	1	175107	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	111	1613	15.0	-28	True	ATTAAA	-17
PB.3523.6	chr14	-	2864	9	full-splice_match	DCAF5	ENST00000554215.5	4803	9	-21	1960	-11	10	multi-exon	FALSE	canonical	1	5417	junction_8	98878.98398926841	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	240	2822	70.0	1062	False	GATAAA	-39
PB.3523.7	chr14	-	2792	9	full-splice_match	DCAF5	ENST00000556847.5	2791	9	-14	13	-14	10	multi-exon	FALSE	canonical	1	6973	junction_8	98390.70263241339	NA	4	NA	TRUE	NA	NA	NA	C	coding	860	2583	168	2750	70.0	1059	False	GATAAA	-39
PB.3523.4	chr14	-	2906	9	full-splice_match	DCAF5	ENST00000341516.9	5953	9	113	2934	-10	10	multi-exon	FALSE	canonical	1	213646	junction_8	39922.01961304532	NA	1	NA	TRUE	NA	NA	NA	C	coding	942	2829	36	2864	70.0	-9	True	GATAAA	-39
PB.3523.5	chr14	-	2802	9	novel_not_in_catalog	DCAF5	novel	5953	9	NA	NA	1042	57	any annotated donor/acceptor	FALSE	canonical	1	1319	junction_8	122576.31892289595	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	111	2690	20.0	2125	False	ATTAAA	-17
PB.3523.2	chr14	-	5763	8	novel_in_catalog	DCAF5	novel	5953	9	NA	NA	-2	-10	intron_retention	FALSE	canonical	1	213646	junction_7	39442.24212952506	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	1252	3771	60.0	-1	True	ATTAAA	-27
PB.3523.3	chr14	-	3833	8	novel_in_catalog	DCAF5	novel	5953	9	NA	NA	15	10	intron_retention	FALSE	canonical	1	213646	junction_7	39442.24212952506	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	1272	3791	70.0	-21	True	GATAAA	-39
PB.3656.13	chr14	+	2167	12	incomplete-splice_match	PAPOLA	ENST00000392990.6	2588	21	-173	27524	3	845	3prime_fragment	FALSE	canonical	1	558170	junction_10	291290.1521134004	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	209	1336	5.0	-5	True	ATTAAA	-21
PB.3523.1	chr14	-	4861	9	full-splice_match	DCAF5	ENST00000341516.9	5953	9	110	982	-13	-8	multi-exon	FALSE	canonical	1	213646	junction_8	39922.01961304532	NA	2	NA	TRUE	NA	NA	NA	C	coding	942	2829	39	2867	50.0	-12	True	ATTAAA	-29
PB.6352.3	chr2	+	1651	8	full-splice_match	CENPO	ENST00000260662.2	4085	8	-24	2458	-7	24	multi-exon	FALSE	canonical	1	24257	junction_1	65631.32344376115	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	152	1054	20.0	12	True	AATAAA	-25
PB.6352.2	chr2	+	4102	8	full-splice_match	CENPO	ENST00000380834.6	4386	8	282	2	-18	1	multi-exon	FALSE	canonical	1	88928	junction_2	51602.60295443893	NA	1	1	TRUE	NA	NA	NA	C	coding	300	903	144	1046	10.0	1	True	AATAAA	-17
PB.6352.1	chr2	+	4023	7	full-splice_match	CENPO	ENST00000473706.5	4272	7	248	1	-7	-1	multi-exon	FALSE	canonical	1	71985	junction_1	53436.259105800265	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	82	966	10.0	-96	False	AATAAA	-18
PB.3656.19	chr14	+	1964	9	full-splice_match	PAPOLA	ENST00000557320.5	3264	9	-8	1308	-5	881	multi-exon	FALSE	canonical	1	841227	junction_8	248525.80462147185	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	201	1058	15.0	3	True	NA	NA
PB.3656.18	chr14	+	1711	16	incomplete-splice_match	PAPOLA	ENST00000392990.6	2588	21	-167	17522	-7	2	3prime_fragment	FALSE	canonical	1	516762	junction_12	309950.4909947608	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1509	203	1711	65.0	1	True	AAAAAG	-41
PB.3523.8	chr14	-	2780	8	novel_in_catalog	DCAF5	novel	5953	9	NA	NA	-12	10	combination_of_known_junctions	FALSE	canonical	1	13694	junction_1	96345.04434540661	NA	3	NA	TRUE	NA	NA	NA	C	coding	527	1584	1155	2738	70.0	-11	True	GATAAA	-39
PB.6352.4	chr2	+	2414	7	incomplete-splice_match	CENPO	ENST00000380834.6	4386	8	298	3186	-2	-460	3prime_fragment	FALSE	canonical	1	88928	junction_2	55298.38426110558	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	128	1030	35.0	17	True	AATAAA	-7
PB.8320.5	chr3	-	3209	7	full-splice_match	CD80	ENST00000264246.7	2725	7	-105	-379	-105	379	multi-exon	FALSE	canonical	1	50720	junction_1	16636.31122641742	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	469	1335	80.0	2945	False	AGTAAA	-30
PB.3280.2	chr13	+	2105	8	incomplete-splice_match	UPF3A	ENST00000351487.5	2235	9	298	6	1	-6	5prime_fragment	FALSE	canonical	1	26	junction_2	22240.30929806214	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	393	1220	50.0	-487	False	AATAAA	-10
PB.11804.1	chr9	-	1530	5	full-splice_match	TOR2A	ENST00000373284.9	1523	5	-6	-1	-6	1	multi-exon	FALSE	canonical	1	68901	junction_4	47462.508848432146	NA	0	NA	TRUE	NA	NA	NA	A	coding	321	966	54	1019	25.0	-30	True	AATAAA	-20
PB.3280.3	chr13	+	2168	9	incomplete-splice_match	UPF3A	ENST00000375299.7	2387	10	378	15	9	-6	5prime_fragment	FALSE	canonical	1	119	junction_1	111019.9330299941	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	456	1283	50.0	-451	False	AATAAA	-10
PB.3458.1	chr14	+	5685	6	full-splice_match	PELI2	ENST00000267460.8	5909	6	9	215	9	-215	multi-exon	FALSE	canonical	1	54527	junction_5	19369.883793146513	NA	3	NA	TRUE	NA	NA	NA	A	coding	420	1263	278	1540	15.0	-34	True	ATTAAA	-24
PB.9727.1	chr6	+	2299	3	novel_in_catalog	AL355499.2	novel	866	9	NA	NA	277484	-285219	no_combination_of_known_junctions	FALSE	canonical	1	133	junction_2	3390.0	NA	9	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	1	True	NA	NA
PB.276.3	chr1	+	4162	10	full-splice_match	ZMYM1	ENST00000359858.8	4175	10	11	2	-4	-1	multi-exon	FALSE	canonical	1	6298	junction_1	28493.113159256092	NA	2	NA	TRUE	NA	NA	NA	C	coding	1142	3429	140	3568	25.0	-8	True	NA	NA
PB.4456.21	chr16	+	1910	2	incomplete-splice_match	ADGRG1	ENST00000540164.6	3820	15	22112	7	8399	0	5prime_fragment	FALSE	canonical	1	559937	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	141	467	30.0	-6676	False	NA	NA
PB.1679.6	chr10	-	1593	12	full-splice_match	TIAL1	ENST00000436547.6	1401	12	-196	4	-74	-4	multi-exon	FALSE	canonical	1	319897	junction_11	407179.22858197417	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	242	1369	70.0	-5	True	NA	NA
PB.1679.7	chr10	-	2029	13	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	1	43978	junction_12	493619.7591571765	NA	2	1	TRUE	NA	NA	NA	C	coding	336	1011	744	1754	55.0	0	True	AATAAA	-37
PB.1679.4	chr10	-	3001	11	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	-21	527	intron_retention	FALSE	canonical	1	235798	junction_9	453067.27978022204	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	521	1486	45.0	-2	True	ATTAAA	-19
PB.1679.5	chr10	-	3853	10	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	-55	-3	intron_retention	FALSE	canonical	1	319897	junction_9	406188.5496755247	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	223	597	50.0	671	False	AATAAA	-25
PB.1679.2	chr10	-	3623	13	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	-69	-1666	combination_of_known_junctions	FALSE	canonical	1	43978	junction_12	493619.7591571765	NA	5	1	TRUE	NA	NA	NA	C	coding	336	1011	416	1426	35.0	0	True	AATAAA	-30
PB.1679.3	chr10	-	3388	12	full-splice_match	TIAL1	ENST00000369093.6	5072	12	-193	1877	-56	1540	multi-exon	FALSE	canonical	1	235798	junction_10	436958.1770937666	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	224	1402	35.0	670	False	AATAAA	-15
PB.10714.13	chr7	-	2491	5	full-splice_match	ZNF3	ENST00000424697.5	2718	5	22	205	-2	0	multi-exon	FALSE	canonical	1	25694	junction_4	77362.25906853742	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	185	1525	90.0	-20	True	NA	NA
PB.1679.1	chr10	-	3561	12	full-splice_match	TIAL1	ENST00000436547.6	1401	12	-191	-1969	-69	-1666	multi-exon	FALSE	canonical	1	319897	junction_11	407179.22858197417	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	237	1364	35.0	0	True	AATAAA	-30
PB.1679.8	chr10	-	4184	10	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	-24	2	intron_retention	FALSE	canonical	1	235798	junction_8	444471.3129176791	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	524	949	50.0	-5	True	AATAAA	-4
PB.1679.9	chr10	-	3363	11	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	-46	2	intron_retention	FALSE	canonical	1	117788	junction_6	469288.2988041466	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	2034	2579	50.0	-17	True	AATAAA	-4
PB.6726.6	chr2	-	2914	15	full-splice_match	ERCC3	ENST00000426778.5	2916	15	1	1	0	-1	multi-exon	FALSE	canonical	1	9140	junction_14	132366.75772865684	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	453	2609	20.0	-1	True	AATAAA	-22
PB.6726.7	chr2	-	2733	15	full-splice_match	ERCC3	ENST00000285398.6	2750	15	16	1	6	-1	multi-exon	FALSE	canonical	1	264096	junction_12	70786.67847898173	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	80	2428	20.0	-17	True	AATAAA	-22
PB.6726.5	chr2	-	2937	14	novel_in_catalog	ERCC3	novel	3390	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	264096	junction_11	71946.91430212717	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1019	2632	20.0	9147	False	AATAAA	-22
PB.6726.2	chr2	-	2736	15	novel_in_catalog	ERCC3	novel	3390	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	14517	junction_10	132266.19899959708	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	64	2430	20.0	-1	True	AATAAA	-23
PB.6726.3	chr2	-	3116	14	novel_in_catalog	ERCC3	novel	3390	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	264096	junction_11	72993.97441849762	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1198	2811	20.0	-1	True	AATAAA	-22
PB.276.2	chr1	+	1785	11	novel_in_catalog	ZMYM1	novel	4608	13	NA	NA	-4	124	combination_of_known_junctions	FALSE	canonical	1	1080	junction_1	31368.410020273583	NA	2	1	TRUE	NA	NA	NA	C	coding	554	1662	124	1785	60.0	-23	False	NA	NA
PB.6726.1	chr2	-	3326	13	novel_in_catalog	ERCC3	novel	3390	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	264096	junction_10	74240.18781681785	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1407	3020	20.0	-23	True	AATAAA	-23
PB.8751.2	chr4	-	4439	6	novel_in_catalog	RBM47	novel	4816	6	NA	NA	7	-60	combination_of_known_junctions	FALSE	canonical	1	29150	junction_2	73718.9042105212	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	702	2276	65.0	6	True	AAAAAG	-5
PB.4684.2	chr17	+	1941	2	full-splice_match	MED11	ENST00000573708.1	802	2	-3	-1136	0	-41	multi-exon	FALSE	canonical	1	277158	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	93	282	63	344	70.0	0	True	AAAACA	-21
PB.8320.3	chr3	-	3634	6	novel_not_in_catalog	CD80	novel	2725	7	NA	NA	2098	1282	any annotated donor/acceptor	FALSE	canonical	1	1779	junction_5	29656.436306474854	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	204	857	20.0	7022	False	ATTAAA	-19
PB.6726.8	chr2	-	2770	14	novel_in_catalog	ERCC3	novel	3390	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	19789	junction_12	135618.3625304619	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	854	2467	25.0	-11	True	AATAAA	-20
PB.8751.3	chr4	-	4643	7	full-splice_match	RBM47	ENST00000295971.11	4056	7	-1	-586	-1	-71	multi-exon	FALSE	canonical	1	86494	junction_6	63366.93715026438	NA	2	NA	TRUE	NA	NA	NA	C	coding	593	1782	710	2491	70.0	-2	True	NA	NA
PB.11326.5	chr8	-	4372	28	full-splice_match	ATAD2	ENST00000287394.9	5565	28	20	1173	-11	-342	multi-exon	FALSE	canonical	1	251410	junction_27	83051.09982113836	NA	2	NA	TRUE	NA	NA	NA	C	coding	1390	4173	89	4261	60.0	-16	True	NA	NA
PB.11326.4	chr8	-	4608	28	full-splice_match	ATAD2	ENST00000287394.9	5565	28	-29	986	-29	-155	multi-exon	FALSE	canonical	1	251410	junction_27	83051.09982113836	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	138	4310	45.0	-16	False	AATAAA	-33
PB.11128.2	chr8	-	6268	24	full-splice_match	RB1CC1	ENST00000025008.9	6635	24	-67	434	-33	-431	multi-exon	FALSE	canonical	1	145642	junction_23	95105.45031042428	NA	1	NA	TRUE	NA	NA	NA	C	coding	1594	4785	592	5376	30.0	-65	False	AATAAA	-14
PB.11326.6	chr8	-	2945	20	incomplete-splice_match	ATAD2	ENST00000287394.9	5565	28	3	19475	3	5188	3prime_fragment	FALSE	canonical	1	251410	junction_19	67464.57514820632	NA	0	NA	TRUE	NA	NA	NA	C	coding	946	2838	106	2943	55.0	16	False	AAAACA	-22
PB.7292.1	chr20	+	1986	4	full-splice_match	FAM83D	ENST00000619850.1	2361	4	316	59	316	-59	multi-exon	FALSE	canonical	1	204523	junction_1	49233.36562400205	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	200	1459	25.0	325	False	AATAAA	-14
PB.7292.2	chr20	+	2294	5	novel_not_in_catalog	FAM83D	novel	2475	4	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125830.91152291435	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	30	1709	10.0	-3	True	AATAAA	-20
PB.10367.13	chr7	-	2456	4	novel_in_catalog	MRM2	novel	1819	3	NA	NA	-10	-232	combination_of_known_junctions	FALSE	canonical	1	26239	junction_3	30364.67799196223	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1373	1861	70.0	25	True	NA	NA
PB.8123.7	chr3	-	3262	24	full-splice_match	UBA7	ENST00000333486.3	3299	24	33	4	19	-4	multi-exon	FALSE	canonical	1	217725	junction_11	95425.42930461332	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	127	3165	35.0	32	True	NA	NA
PB.10367.11	chr7	-	2637	5	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	2261	junction_2	34837.18277483844	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	2	460	20.0	12	True	CATAAA	-15
PB.10367.10	chr7	-	1743	3	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	5259	junction_2	138531.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	18	True	CATAAA	-16
PB.10367.16	chr7	-	2173	4	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	-4	-239	any annotated donor/acceptor	FALSE	canonical	1	9080	junction_2	48676.97464122254	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1097	1585	75.0	2	True	NA	NA
PB.10367.15	chr7	-	2269	4	full-splice_match	MRM2	ENST00000486040.1	2511	4	3	239	3	-239	multi-exon	FALSE	canonical	1	87636	junction_2	16109.655013893584	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1193	1681	75.0	18	True	NA	NA
PB.10367.14	chr7	-	1365	3	full-splice_match	MRM2	ENST00000242257.12	1601	3	-7	243	-7	-239	multi-exon	FALSE	canonical	1	124286	junction_2	79017.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	37	777	75.0	-1	True	NA	NA
PB.13.5	chr1	-	2413	7	full-splice_match	UBE2J2	ENST00000360466.6	1047	7	-116	-1250	2	0	multi-exon	FALSE	canonical	1	10696	junction_6	273720.85574282304	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	345	1124	15.0	-10	True	AAAAAG	-26
PB.13.4	chr1	-	2472	8	novel_in_catalog	UBE2J2	novel	2455	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	2371	junction_4	322463.76177037635	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	641	1183	15.0	-15	True	AAAAAG	-26
PB.13.7	chr1	-	2126	6	full-splice_match	UBE2J2	ENST00000400929.6	1057	6	1	-1070	0	-1	multi-exon	FALSE	canonical	1	27291	junction_5	293030.012378664	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	215	838	15.0	-22	True	AAAAAG	-25
PB.13.6	chr1	-	2298	8	full-splice_match	UBE2J2	ENST00000400930.8	1021	8	-14	-1263	2	-1	multi-exon	FALSE	canonical	0	0	junction_6	331479.79944633064	NA	2	1	TRUE	NA	NA	NA	C	coding	275	828	183	1010	15.0	-15	True	AAAAAG	-25
PB.7335.1	chr20	-	2736	5	novel_not_in_catalog	LINC01754	novel	750	4	NA	NA	-359	8564	any annotated donor/acceptor	FALSE	canonical	1	3533	junction_3	1671.22685099899	NA	1	NA	TRUE	NA	NA	NA	A	coding	135	408	597	1004	100.0	-1	True	NA	NA
PB.11779.4	chr9	-	3492	21	full-splice_match	DENND1A	ENST00000373620.7	3612	21	141	-21	122	21	multi-exon	FALSE	canonical	1	111041	junction_20	52558.29520912945	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	81	1760	30.0	1	True	ACTAAA	-34
PB.13.3	chr1	-	2642	6	novel_not_in_catalog	UBE2J2	novel	2455	8	NA	NA	537	0	any annotated donor/acceptor	FALSE	canonical	1	28	junction_5	382276.8753505239	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	811	1353	15.0	4852	False	AAAAAG	-26
PB.13.2	chr1	-	2261	7	full-splice_match	UBE2J2	ENST00000349431.10	1733	7	34	-562	-2	1	multi-exon	FALSE	canonical	1	342093	junction_6	163174.52269034594	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	187	966	5.0	-19	True	AAAAAG	-32
PB.13.9	chr1	-	2075	7	novel_in_catalog	UBE2J2	novel	2455	8	NA	NA	2	82	combination_of_known_junctions	FALSE	canonical	1	16464	junction_6	271701.3512544099	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	996	1775	25.0	-15	True	AGTAAA	-15
PB.13.8	chr1	-	1272	7	full-splice_match	UBE2J2	ENST00000349431.10	1733	7	34	427	-2	88	multi-exon	FALSE	canonical	1	342093	junction_6	163174.52269034594	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	187	966	30.0	-19	True	AGTAAA	-21
PB.3462.6	chr14	+	3917	5	full-splice_match	NAA30	ENST00000556492.5	7644	5	28	3699	-7	-528	multi-exon	FALSE	canonical	1	59533	junction_1	80209.29382091579	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	127	1215	85.0	-5	True	NA	NA
PB.3462.7	chr14	+	4258	5	full-splice_match	NAA30	ENST00000556492.5	7644	5	32	3354	-3	-183	multi-exon	FALSE	canonical	1	59533	junction_1	80209.29382091579	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	123	1211	35.0	-1	True	CATAAA	-14
PB.3462.4	chr14	+	3227	2	incomplete-splice_match	NAA30	ENST00000556492.5	7644	5	33	21854	-2	-15868	3prime_fragment	FALSE	canonical	1	59533	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	260	783	122	904	50.0	0	True	NA	NA
PB.3462.5	chr14	+	2317	5	full-splice_match	NAA30	ENST00000556492.5	7644	5	26	5301	-9	286	multi-exon	FALSE	canonical	1	59533	junction_1	80209.29382091579	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	129	1217	20.0	-7	True	AATAAA	-26
PB.3462.2	chr14	+	3707	4	full-splice_match	NAA30	ENST00000555166.5	1294	4	25	-2438	16	22	multi-exon	FALSE	canonical	1	3322	junction_1	117776.22152294674	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	141	455	20.0	-17	False	AATAAA	-37
PB.3462.3	chr14	+	2891	5	full-splice_match	NAA30	ENST00000556492.5	7644	5	25	4728	-10	859	multi-exon	FALSE	canonical	1	59533	junction_1	80209.29382091579	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	130	1218	25.0	-8	True	AATAAA	-44
PB.3462.1	chr14	+	4456	5	full-splice_match	NAA30	ENST00000556492.5	7644	5	37	3151	2	20	multi-exon	FALSE	canonical	1	59533	junction_1	80209.29382091579	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	118	1206	25.0	4	True	AATAAA	-35
PB.3462.8	chr14	+	4235	5	novel_in_catalog	NAA30	novel	1294	4	NA	NA	-2	17	combination_of_known_junctions	FALSE	canonical	1	1975	junction_2	112926.78869819817	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	122	988	25.0	0	True	AATAAA	-32
PB.3462.9	chr14	+	3140	4	full-splice_match	NAA30	ENST00000555166.5	1294	4	42	-1888	-2	-528	multi-exon	FALSE	canonical	1	3322	junction_1	117776.22152294674	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	124	438	85.0	0	True	NA	NA
PB.5566.9	chr19	+	1758	5	novel_in_catalog	MUM1	novel	522	3	NA	NA	13	22	combination_of_known_junctions	FALSE	canonical	1	32979	junction_1	65678.84269686852	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	31	True	AATAAA	-11
PB.5566.8	chr19	+	2613	14	novel_in_catalog	MUM1	novel	522	3	NA	NA	4	30	combination_of_known_junctions	FALSE	canonical	1	46663	junction_1	75774.28518596389	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	110	2242	25.0	22	True	ATTAAA	-12
PB.950.1	chr1	-	4174	3	full-splice_match	MRPS14	ENST00000476371.1	2115	3	0	-2059	0	-110	multi-exon	FALSE	canonical	1	654418	junction_2	59639.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	18	404	20.0	-1	True	AATAAA	-15
PB.5566.5	chr19	+	4098	14	novel_in_catalog	MUM1	novel	522	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	46663	junction_1	75774.28518596389	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	111	2243	10.0	21	True	ATTAAA	-16
PB.5566.4	chr19	+	4212	15	novel_not_in_catalog	MUM1	novel	522	3	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	108261.80072907545	NA	3	1	TRUE	NA	NA	NA	C	coding	642	1929	429	2357	10.0	21	True	ATTAAA	-16
PB.5566.7	chr19	+	2951	4	incomplete-splice_match	MUM1	ENST00000590695.2	2290	5	59	715	4	22	3prime_fragment	FALSE	canonical	1	46663	junction_1	71160.67135402502	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	22	True	AATAAA	-11
PB.4911.13	chr17	-	2627	3	novel_in_catalog	SLFN13	novel	8469	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	125	junction_2	21825.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	127	1530	80.0	9	True	NA	NA
PB.5566.1	chr19	+	1664	5	novel_in_catalog	MUM1	novel	522	3	NA	NA	-3	22	combination_of_known_junctions	FALSE	canonical	1	46663	junction_1	61651.986804968416	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	10	True	AATAAA	-11
PB.5566.3	chr19	+	1348	3	full-splice_match	MUM1	ENST00000592374.5	522	3	269	-1095	3	1095	multi-exon	FALSE	canonical	1	46663	junction_1	83401.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	21	True	TTTAAA	-29
PB.5566.2	chr19	+	2988	14	novel_not_in_catalog	MUM1	novel	522	3	NA	NA	2	29	any annotated donor/acceptor	FALSE	canonical	1	23255	junction_13	94576.47279712626	NA	8	1	TRUE	NA	NA	NA	C	coding	695	2088	112	2199	25.0	20	True	ATTAAA	-11
PB.950.4	chr1	-	3740	3	full-splice_match	MRPS14	ENST00000476371.1	2115	3	-17	-1608	-17	-561	multi-exon	FALSE	canonical	1	654418	junction_2	59639.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	35	421	30.0	-18	False	ATTAAA	-17
PB.950.5	chr1	-	3538	3	full-splice_match	MRPS14	ENST00000476371.1	2115	3	0	-1423	0	-746	multi-exon	FALSE	canonical	1	654418	junction_2	59639.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	18	404	40.0	-1	True	TATAAA	-15
PB.275.4	chr1	-	4322	16	full-splice_match	ZMYM6	ENST00000357182.8	4330	16	6	2	6	-2	multi-exon	FALSE	canonical	1	47968	junction_15	48925.17540008302	NA	0	NA	TRUE	NA	NA	NA	C	coding	1325	3978	223	4200	15.0	-18	True	ATTAAA	-16
PB.10668.24	chr7	-	2860	19	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	-6	-68758	no_combination_of_known_junctions	FALSE	canonical	1	10341	junction_18	88730.7072402673	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	446	2656	50.0	-17	True	NA	NA
PB.275.6	chr1	-	2981	15	novel_in_catalog	AC114490.2	novel	3099	17	NA	NA	-231	-6633	no_combination_of_known_junctions	FALSE	canonical	1	4517	junction_14	56875.33817257616	NA	1	NA	TRUE	NA	NA	NA	B	coding	875	2625	357	2981	20.0	-28	True	NA	NA
PB.275.1	chr1	-	5088	17	novel_not_in_catalog	AC114490.2	novel	3099	17	NA	NA	-173	-4635	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	57197.711088620876	NA	4	NA	TRUE	NA	NA	NA	B	coding	1325	3978	175	4152	50.0	30	True	NA	NA
PB.275.2	chr1	-	5670	16	novel_in_catalog	AC114490.2	novel	3099	17	NA	NA	-4	-5444	no_combination_of_known_junctions	FALSE	canonical	1	6813	junction_1	57847.39671607242	NA	2	NA	TRUE	NA	NA	NA	B	coding	732	2199	190	2388	30.0	-56	True	ATTAAA	-21
PB.10668.25	chr7	-	2963	19	full-splice_match	KRIT1	ENST00000394505.6	3143	19	4	176	1	-80	multi-exon	FALSE	canonical	1	39672	junction_18	84468.76727029688	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	551	2761	60.0	-6	True	NA	NA
PB.11458.2	chr9	-	6590	45	novel_not_in_catalog	MPDZ	novel	7722	47	NA	NA	-129	-19	any annotated donor/acceptor	FALSE	canonical	1	20440	junction_44	43399.434370641655	NA	2	1	TRUE	NA	NA	NA	B	coding	2000	6003	214	6216	75.0	-40	True	AGTAAA	-9
PB.275.8	chr1	-	2841	15	novel_in_catalog	AC114490.2	novel	3099	17	NA	NA	9	-6634	no_combination_of_known_junctions	FALSE	canonical	1	3682	junction_12	56520.95356938749	NA	0	NA	TRUE	NA	NA	NA	B	coding	777	2331	509	2839	20.0	-43	True	NA	NA
PB.10668.26	chr7	-	2734	17	novel_not_in_catalog	AC000120.3	novel	2642	18	NA	NA	10	-68760	any annotated donor/acceptor	FALSE	canonical	1	1091	junction_16	80945.013893306	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	322	2532	60.0	-1	True	NA	NA
PB.1079.4	chr1	+	2654	3	novel_not_in_catalog	IL19	novel	1032	6	NA	NA	-28100	-12926	any annotated donor/acceptor	FALSE	canonical	1	3119	junction_2	989.0	NA	7	1	TRUE	NA	NA	NA	B	coding	102	309	635	943	85.0	-4	True	NA	NA
PB.950.8	chr1	-	2118	3	full-splice_match	MRPS14	ENST00000476371.1	2115	3	-5	2	-5	-2	multi-exon	FALSE	canonical	1	654418	junction_2	59639.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	23	409	30.0	-6	True	NA	NA
PB.1079.1	chr1	+	3601	3	novel_not_in_catalog	IL19	novel	1032	6	NA	NA	-28175	-11806	any annotated donor/acceptor	FALSE	canonical	1	1272	junction_1	923.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	102	309	462	770	20.0	-108	False	NA	NA
PB.1079.2	chr1	+	2441	3	novel_not_in_catalog	IL19	novel	1032	6	NA	NA	-28135	-12926	any annotated donor/acceptor	FALSE	canonical	1	1272	junction_1	923.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	102	309	422	730	85.0	-68	False	NA	NA
PB.1079.3	chr1	+	2264	3	novel_not_in_catalog	IL19	novel	1032	6	NA	NA	-28132	-13348	any annotated donor/acceptor	FALSE	canonical	1	3119	junction_2	989.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	102	309	667	975	10.0	-65	False	NA	NA
PB.10668.20	chr7	-	3275	18	novel_not_in_catalog	AC000120.3	novel	2642	18	NA	NA	4	-68243	any annotated donor/acceptor	FALSE	canonical	1	8120	junction_17	97992.97479007163	NA	5	NA	TRUE	NA	NA	NA	B	coding	736	2211	346	2556	40.0	-7	True	AATAAA	-20
PB.7125.7	chr20	+	2330	11	full-splice_match	RBCK1	ENST00000640614.1	2599	11	273	-4	-5	2	multi-exon	FALSE	canonical	1	32375	junction_6	200201.16672409783	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	421	1239	20.0	-150	False	ATTAAA	-18
PB.812.9	chr1	-	2832	14	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	87077	junction_5	135077.07930177578	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	41	1195	0.0	-5	True	AATAAA	-14
PB.276.6	chr1	+	4100	10	novel_not_in_catalog	ZMYM1	novel	4608	13	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	3388	junction_7	35717.874479845865	NA	3	NA	TRUE	NA	NA	NA	C	coding	1123	3372	136	3507	25.0	-4	True	NA	NA
PB.10668.22	chr7	-	3119	19	full-splice_match	KRIT1	ENST00000394505.6	3143	19	9	15	0	0	multi-exon	FALSE	canonical	1	39672	junction_18	84468.76727029688	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	546	2756	80.0	-1	True	NA	NA
PB.2564.30	chr12	-	2406	16	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	1176	414	any annotated donor/acceptor	FALSE	canonical	1	5870	junction_15	235401.88053467675	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	289	1713	30.0	3512	False	ATTAAA	-17
PB.2564.31	chr12	-	2065	17	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	-3	413	any annotated donor/acceptor	FALSE	canonical	1	3570	junction_1	259918.89471378253	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	348	1709	30.0	42	True	ATTAAA	-16
PB.2940.4	chr12	+	4377	11	novel_in_catalog	SUDS3	novel	4897	12	NA	NA	143	-305	no_combination_of_known_junctions	FALSE	canonical	1	172	junction_3	58312.63730624778	NA	5	1	TRUE	NA	NA	NA	C	coding	304	915	170	1084	25.0	12	True	AATAAA	-20
PB.2940.5	chr12	+	4756	12	full-splice_match	SUDS3	ENST00000543473.1	4897	12	150	-9	150	9	multi-exon	FALSE	canonical	1	3387	junction_8	55560.13871205218	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	163	1149	25.0	-25	False	AATAAA	-22
PB.2940.6	chr12	+	4453	11	novel_not_in_catalog	SUDS3	novel	4897	12	NA	NA	167	-319	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	59544.70480244235	NA	23	2	TRUE	NA	NA	NA	C	coding	228	687	488	1174	60.0	-8	True	AATAAA	-6
PB.10668.23	chr7	-	3057	19	novel_in_catalog	AC000120.3	novel	2642	18	NA	NA	35	-68599	no_combination_of_known_junctions	FALSE	canonical	1	16446	junction_18	87818.31010301191	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	484	2694	80.0	24	True	NA	NA
PB.2940.1	chr12	+	2735	12	full-splice_match	SUDS3	ENST00000543473.1	4897	12	121	2041	121	1335	multi-exon	FALSE	canonical	1	3387	junction_8	55560.13871205218	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	192	1178	20.0	-10	True	GATAAA	-14
PB.2940.2	chr12	+	4210	12	full-splice_match	SUDS3	ENST00000543473.1	4897	12	132	555	132	-555	multi-exon	FALSE	canonical	1	3387	junction_8	55560.13871205218	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	181	1167	15.0	1	True	AATAAA	-14
PB.2940.3	chr12	+	4450	12	full-splice_match	SUDS3	ENST00000543473.1	4897	12	143	304	143	-304	multi-exon	FALSE	canonical	1	3387	junction_8	55560.13871205218	NA	2	NA	TRUE	NA	NA	NA	C	coding	328	987	170	1156	25.0	12	True	AATAAA	-21
PB.6615.1	chr2	+	1726	7	novel_in_catalog	RPIA	novel	1848	9	NA	NA	6	1	no_combination_of_known_junctions	FALSE	canonical	1	3647	junction_1	162018.95236051863	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	50	868	15.0	-23	True	AATAAA	-22
PB.7938.14	chr3	-	1398	5	full-splice_match	VGLL4	ENST00000430365.6	1377	5	-35	14	-35	-14	multi-exon	FALSE	canonical	1	198403	junction_4	59299.88437172538	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	457	1332	70.0	85	False	NA	NA
PB.812.8	chr1	-	4485	13	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-13	0	intron_retention	FALSE	canonical	1	113514	junction_2	116787.86606124323	NA	2	NA	TRUE	NA	NA	NA	C	coding	510	1533	41	1573	0.0	-5	True	AATAAA	-14
PB.12239.2	chrX	-	2375	10	full-splice_match	SEPT6	ENST00000354228.8	1576	10	186	-985	186	-3	multi-exon	TRUE	canonical	1	52544	junction_1	339932.81521994615	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	80	1369	25.0	6	True	AATAAA	-16
PB.10439.1	chr7	+	1535	7	full-splice_match	FAM221A	ENST00000344962.8	1472	7	-64	1	-64	-1	multi-exon	FALSE	canonical	1	39871	junction_4	30064.774519175906	NA	2	NA	TRUE	NA	NA	NA	A	coding	298	897	154	1050	25.0	-164	False	AATAAA	-24
PB.10927.1	chr7	+	1847	3	full-splice_match	GIMAP5	ENST00000358647.4	2291	3	30	414	30	3	multi-exon	FALSE	canonical	1	182304	junction_1	17627.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	307	924	338	1261	20.0	2	True	NA	NA
PB.68.6	chr1	-	2368	12	novel_in_catalog	ENO1	novel	1781	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	10348	junction_5	7357075.161431034	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	1437	2012	15.0	-1	True	AATAAA	-21
PB.1230.3	chr1	-	1576	10	full-splice_match	FH	ENST00000366560.3	1797	10	36	185	36	-185	multi-exon	FALSE	canonical	1	315777	junction_2	331241.0164249695	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	133	1536	50.0	29	True	AATAAA	-14
PB.10668.28	chr7	-	2016	3	full-splice_match	KRIT1	ENST00000452773.5	665	3	1	-1352	0	1120	multi-exon	FALSE	canonical	1	57871	junction_2	113460.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.1230.1	chr1	-	1764	10	full-splice_match	FH	ENST00000366560.3	1797	10	7	26	7	-26	multi-exon	FALSE	canonical	1	315777	junction_2	331241.0164249695	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	162	1565	75.0	0	True	ATTAAA	-26
PB.11101.7	chr8	+	3694	21	novel_not_in_catalog	ADAM9	novel	2053	5	NA	NA	-45	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	357051.55768926075	NA	3	1	TRUE	NA	NA	NA	C	coding	739	2220	124	2343	10.0	-32	True	NA	NA
PB.3266.4	chr13	-	3874	22	full-splice_match	TUBGCP3	ENST00000261965.7	3899	22	18	7	-14	-7	multi-exon	FALSE	canonical	1	150653	junction_21	34462.11859774291	NA	1	NA	TRUE	NA	NA	NA	C	coding	907	2724	170	2893	20.0	1	True	ATTAAA	-15
PB.2976.2	chr12	+	2323	6	full-splice_match	PSMD9	ENST00000541212.5	2784	6	27	434	-4	0	multi-exon	FALSE	canonical	1	657985	junction_3	135800.43445674243	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	100	771	10.0	-64	True	AATAAA	-17
PB.2976.1	chr12	+	1132	6	full-splice_match	PSMD9	ENST00000541212.5	2784	6	0	1652	0	1	multi-exon	FALSE	canonical	1	657985	junction_3	135800.43445674243	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	127	798	15.0	0	True	NA	NA
PB.3266.7	chr13	-	2759	21	novel_not_in_catalog	TUBGCP3	novel	3899	22	NA	NA	14	4	any annotated donor/acceptor	FALSE	canonical	1	9114	junction_1	58084.39691627606	NA	1	1	TRUE	NA	NA	NA	C	coding	818	2457	174	2630	20.0	-3	True	AATAAA	-29
PB.3266.1	chr13	-	4604	21	novel_in_catalog	TUBGCP3	novel	3899	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	150653	junction_20	34555.53193469897	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	2124	3617	20.0	-19	True	ATTAAA	-21
PB.3266.2	chr13	-	3828	22	novel_not_in_catalog	TUBGCP3	novel	3899	22	NA	NA	14	-1	any annotated donor/acceptor	FALSE	canonical	1	3987	junction_16	57177.7577297128	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	1348	2841	20.0	-3	True	ATTAAA	-21
PB.3266.3	chr13	-	4017	23	novel_in_catalog	TUBGCP3	novel	3899	22	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	2014	junction_22	70630.05756753849	NA	2	NA	TRUE	NA	NA	NA	C	coding	678	2037	996	3032	15.0	-15	True	ATTAAA	-19
PB.7830.7	chr22	-	4362	9	novel_not_in_catalog	NAGA	novel	3694	9	NA	NA	26	-20	intron_retention	FALSE	canonical	1	2435	junction_2	121859.19540799691	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	508	1467	30.0	-15	True	NA	NA
PB.7830.5	chr22	-	3274	10	novel_not_in_catalog	NAGA	novel	3694	9	NA	NA	-4	-13	any annotated donor/acceptor	FALSE	canonical	1	2165	junction_9	146431.09896618425	NA	5	1	TRUE	NA	NA	NA	C	coding	396	1191	172	1362	30.0	-57	True	NA	NA
PB.7830.4	chr22	-	3248	10	full-splice_match	NAGA	ENST00000402937.1	1869	10	-5	-1374	-5	-74	multi-exon	FALSE	canonical	1	54904	junction_9	100957.15028896733	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	162	1397	55.0	-58	True	NA	NA
PB.3266.8	chr13	-	2694	11	incomplete-splice_match	TUBGCP3	ENST00000375669.7	2723	21	-57	45735	-15	14	3prime_fragment	FALSE	canonical	1	150653	junction_10	40264.8316724409	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	203	1561	20.0	-32	False	NA	NA
PB.3266.9	chr13	-	2463	10	full-splice_match	TUBGCP3	ENST00000464139.5	2461	10	-3	1	-3	-1	multi-exon	FALSE	canonical	1	150653	junction_9	42190.43232245382	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	159	1478	35.0	12	True	AATAAA	-20
PB.8510.2	chr3	+	2494	9	full-splice_match	MYNN	ENST00000356716.8	2833	9	-41	380	-19	-338	multi-exon	FALSE	canonical	1	52573	junction_2	72394.77100322492	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	176	2008	45.0	-19	True	AATAAA	-20
PB.3068.8	chr13	-	4495	10	novel_not_in_catalog	USP12	novel	4511	9	NA	NA	85	-14	any annotated donor/acceptor	FALSE	canonical	1	14117	junction_6	23220.08259202036	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	616	1368	10.0	-1	True	ATTAAA	-16
PB.7068.26	chr2	-	3161	13	novel_in_catalog	NCL	novel	4034	14	NA	NA	107	0	intron_retention	FALSE	canonical	1	4769916	junction_11	1349889.297233748	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	135	1307	20.0	-4	True	NA	NA
PB.7068.25	chr2	-	4141	11	novel_in_catalog	NCL	novel	4034	14	NA	NA	-105	0	intron_retention	FALSE	canonical	1	4769916	junction_9	1411279.4382895827	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	132	1304	20.0	-1	True	NA	NA
PB.7068.23	chr2	-	2608	15	novel_in_catalog	NCL	novel	4034	14	NA	NA	55	-66	combination_of_known_junctions	FALSE	canonical	1	32520	junction_6	2634996.545658121	NA	4	NA	TRUE	NA	NA	NA	C	coding	734	2205	187	2391	25.0	-56	False	TATAAA	-27
PB.7068.22	chr2	-	2635	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-106	153	any annotated donor/acceptor	TRUE	canonical	1	311	junction_1	2223832.6997551005	NA	5	NA	TRUE	NA	NA	NA	C	coding	688	2067	133	2199	15.0	-2	True	ATTAAA	-13
PB.7068.20	chr2	-	2218	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-107	157	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	2202564.652642683	NA	2	1	TRUE	NA	NA	NA	C	coding	500	1503	276	1778	30.0	-3	True	ATTAAA	-17
PB.6683.1	chr2	-	3252	11	full-splice_match	SEPT10	ENST00000397712.6	3071	11	1	-182	1	182	multi-exon	FALSE	canonical	1	31094	junction_3	25686.51837520998	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	379	1743	35.0	-1	True	AATAAA	-16
PB.3068.2	chr13	-	4274	9	full-splice_match	USP12	ENST00000282344.10	4511	9	225	12	30	-12	multi-exon	FALSE	canonical	1	35849	junction_2	35551.38884395904	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	33	1145	10.0	139	False	ATTAAA	-18
PB.3068.3	chr13	-	4336	8	novel_in_catalog	USP12	novel	4511	9	NA	NA	84	-12	no_combination_of_known_junctions	FALSE	canonical	1	20756	junction_1	38082.776938492	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	174	1112	10.0	-2	True	ATTAAA	-18
PB.3068.4	chr13	-	4201	8	novel_in_catalog	USP12	novel	4511	9	NA	NA	84	-12	no_combination_of_known_junctions	FALSE	canonical	1	5841	junction_6	21816.30762825397	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	320	1072	10.0	-2	True	ATTAAA	-18
PB.6683.5	chr2	-	2791	11	full-splice_match	SEPT10	ENST00000397712.6	3071	11	275	5	-4	-1	multi-exon	FALSE	canonical	1	31094	junction_3	25686.51837520998	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	105	1469	30.0	29	True	AATAAA	-39
PB.6616.1	chr2	+	3252	1	antisense	novelGene_AC244205.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6683.7	chr2	-	2461	7	novel_in_catalog	SEPT10	novel	3091	12	NA	NA	-27	0	no_combination_of_known_junctions	FALSE	canonical	1	3694	junction_6	44744.95122729863	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	344	1138	30.0	34	False	AATAAA	-40
PB.2671.14	chr12	-	1776	18	incomplete-splice_match	SMARCC2	ENST00000267064.8	4076	28	59	9262	-6	-368	3prime_fragment	FALSE	canonical	1	249118	junction_17	172367.3032386299	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1746	29	1774	45.0	-17	True	NA	NA
PB.2671.13	chr12	-	3840	30	full-splice_match	SMARCC2	ENST00000394023.7	4271	30	68	363	-16	-1	multi-exon	FALSE	canonical	1	40859	junction_2	226871.5221420929	NA	0	NA	TRUE	NA	NA	NA	C	coding	1152	3459	39	3497	85.0	795	False	NA	NA
PB.812.6	chr1	-	4387	13	novel_not_in_catalog	KHDC4	novel	2947	14	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	53615	junction_4	144415.29418974198	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	46	1197	0.0	-10	True	AATAAA	-15
PB.11408.3	chr8	+	2356	2	incomplete-splice_match	LRRC14	ENST00000528528.1	1408	3	-70	-723	-70	-9	intron_retention	FALSE	canonical	1	146084	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	286	651	45.0	-32	True	NA	NA
PB.6501.6	chr2	+	1983	10	full-splice_match	UGP2	ENST00000394417.6	2136	10	149	4	-43	0	multi-exon	FALSE	canonical	1	647877	junction_1	332143.25408674695	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	159	1652	30.0	-21	True	AATAAA	-11
PB.1214.11	chr1	-	1747	15	incomplete-splice_match	ARID4B	ENST00000491632.5	3823	20	-31	42826	-3	-515	3prime_fragment	FALSE	canonical	1	212927	junction_7	38900.68695080972	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1266	481	1746	65.0	593	False	NA	NA
PB.1214.10	chr1	-	1829	15	incomplete-splice_match	ARID4B	ENST00000491632.5	3823	20	-72	42785	-21	-474	3prime_fragment	FALSE	canonical	1	212927	junction_7	38900.68695080972	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1308	522	1829	60.0	552	False	AATAAA	-29
PB.1214.13	chr1	-	4268	7	incomplete-splice_match	ARID4B	ENST00000466653.1	2315	11	-3	14788	-1	-14788	3prime_fragment	FALSE	canonical	1	244269	junction_6	35687.29579159321	NA	1	NA	TRUE	NA	NA	NA	C	coding	149	450	502	951	70.0	572	False	NA	NA
PB.1214.12	chr1	-	1317	11	full-splice_match	ARID4B	ENST00000466653.1	2315	11	42	956	-7	-956	multi-exon	FALSE	canonical	1	212927	junction_3	43077.632042743484	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	861	457	1317	65.0	-8	True	NA	NA
PB.1214.14	chr1	-	2967	4	novel_not_in_catalog	ARID4B	novel	5946	24	NA	NA	-10	-29204	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	124054.30599629431	NA	1	1	TRUE	NA	NA	NA	C	coding	153	462	2	463	45.0	-11	True	NA	NA
PB.11242.2	chr8	+	1759	3	incomplete-splice_match	ESRP1	ENST00000519505.5	3068	12	32065	3	13105	-3	5prime_fragment	FALSE	canonical	1	42309	junction_1	77045.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-18
PB.11242.1	chr8	+	1950	4	incomplete-splice_match	ESRP1	ENST00000358397.9	3756	16	37049	2	13066	-2	5prime_fragment	FALSE	canonical	1	159104	junction_1	15313.342098386694	NA	0	NA	TRUE	NA	NA	NA	B	coding	83	252	124	375	15.0	0	True	AATAAA	-19
PB.812.5	chr1	-	5276	12	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-13	0	intron_retention	FALSE	canonical	1	239164	junction_11	94117.87614387987	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	41	1489	0.0	-5	True	AATAAA	-16
PB.266.18	chr1	-	2778	6	novel_in_catalog	AK2	novel	3576	6	NA	NA	-4	556	intron_retention	FALSE	canonical	1	632	junction_3	251361.55074553465	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	54	662	10.0	-3	True	AATAAA	-16
PB.266.19	chr1	-	1763	8	novel_in_catalog	AK2	novel	3576	6	NA	NA	1	556	combination_of_known_junctions	FALSE	canonical	1	632	junction_4	156043.08941338435	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	302	856	10.0	64	False	AATAAA	-16
PB.266.16	chr1	-	4026	6	full-splice_match	AK2	ENST00000354858.10	1021	6	117	-3122	2	556	multi-exon	FALSE	canonical	1	632	junction_3	268655.53988525906	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	48	767	10.0	3	True	AATAAA	-16
PB.266.17	chr1	-	2765	7	novel_in_catalog	AK2	novel	3576	6	NA	NA	-10	556	intron_retention	FALSE	canonical	1	632	junction_4	256028.1528489049	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	27	746	10.0	77	False	AATAAA	-16
PB.266.14	chr1	-	3910	6	novel_in_catalog	AK2	novel	3576	6	NA	NA	-2	557	intron_retention	FALSE	canonical	1	632	junction_3	254222.30323604573	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	52	660	10.0	-1	True	AATAAA	-17
PB.266.12	chr1	-	1533	6	full-splice_match	AK2	ENST00000548033.5	936	6	-40	-557	-3	557	multi-exon	FALSE	canonical	1	632	junction_4	175268.1665807	NA	6	NA	TRUE	NA	NA	NA	C	coding	190	573	53	625	10.0	-2	True	AATAAA	-17
PB.266.13	chr1	-	4130	7	full-splice_match	AK2	ENST00000550338.5	886	7	42	-3286	8	557	multi-exon	FALSE	canonical	1	632	junction_3	154403.238012697	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	295	870	10.0	71	False	AATAAA	-17
PB.266.11	chr1	-	1630	7	full-splice_match	AK2	ENST00000373449.6	3586	7	18	1938	-8	556	multi-exon	FALSE	canonical	1	632	junction_4	246175.01132979	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	25	723	10.0	79	False	AATAAA	-16
PB.3813.2	chr15	+	1506	10	full-splice_match	CCNDBP1	ENST00000563065.5	1450	10	-59	3	19	0	multi-exon	FALSE	canonical	1	23798	junction_2	278663.69714012346	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	457	1155	30.0	-8731	False	AATAAA	-18
PB.3719.1	chr14	-	2720	2	full-splice_match	IGHV1-69D	ENST00000624687.1	411	2	-4	-2305	-4	2305	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	63	425	40.0	8444	False	AATATA	-17
PB.8788.3	chr4	+	2821	20	incomplete-splice_match	CEP135	ENST00000257287.4	5562	26	-161	21921	-51	-21662	3prime_fragment	FALSE	canonical	1	50921	junction_1	13736.002980420335	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	286	2820	70.0	-3	True	NA	NA
PB.8788.4	chr4	+	5703	26	full-splice_match	CEP135	ENST00000257287.4	5562	26	-144	3	-34	-3	multi-exon	FALSE	canonical	1	50921	junction_1	19441.03792702437	NA	4	NA	TRUE	NA	NA	NA	C	coding	1140	3423	269	3691	15.0	14	True	AATAAA	-12
PB.8788.5	chr4	+	3718	15	novel_not_in_catalog	CEP135	novel	5562	26	NA	NA	16092	-9	any annotated donor/acceptor	FALSE	canonical	1	2204	junction_1	31033.101513561614	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1806	166	1971	70.0	-28	False	AATAAA	-8
PB.8788.6	chr4	+	3975	15	novel_not_in_catalog	CEP135	novel	5562	26	NA	NA	16120	17	any annotated donor/acceptor	FALSE	canonical	1	2204	junction_1	31033.101513561614	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1806	138	1943	40.0	0	True	AATAAA	-32
PB.3813.3	chr15	+	1771	10	novel_in_catalog	CCNDBP1	novel	2079	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	515913	junction_1	159831.65458694345	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	720	1418	35.0	-1	True	AATAAA	-20
PB.4382.2	chr16	+	4137	21	novel_not_in_catalog	RNF40	novel	711	4	NA	NA	-9	0	intron_retention	FALSE	canonical	1	9763	junction_13	197350.4247033687	NA	5	1	TRUE	NA	NA	NA	C	coding	626	1881	158	2038	25.0	4	True	NA	NA
PB.3280.5	chr13	+	1780	5	novel_in_catalog	UPF3A	novel	2387	10	NA	NA	24	-6	no_combination_of_known_junctions	FALSE	canonical	1	227	junction_1	19948.806573013335	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	440	895	50.0	-436	False	AATAAA	-10
PB.3280.6	chr13	+	1497	8	incomplete-splice_match	UPF3A	ENST00000351487.5	2235	9	406	506	81	353	5prime_fragment	FALSE	canonical	1	26	junction_2	22240.30929806214	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	285	1112	20.0	-379	False	NA	NA
PB.4382.1	chr16	+	4341	19	novel_in_catalog	RNF40	novel	711	4	NA	NA	-9	0	intron_retention	FALSE	canonical	1	266913	junction_1	126940.42317877137	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2970	120	3089	25.0	4	True	NA	NA
PB.4382.6	chr16	+	4254	20	novel_in_catalog	RNF40	novel	711	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	54246	junction_1	157432.60616446033	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	148	3153	25.0	1	True	NA	NA
PB.3280.1	chr13	+	2340	10	full-splice_match	UPF3A	ENST00000375299.7	2387	10	32	15	-12	-6	multi-exon	FALSE	canonical	1	119	junction_2	105281.45840355863	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	25	1455	50.0	5	True	AATAAA	-10
PB.4382.4	chr16	+	2169	11	incomplete-splice_match	RNF40	ENST00000493683.5	5371	19	-21	8808	-7	714	3prime_fragment	FALSE	canonical	1	266913	junction_1	113309.18444609862	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	118	1557	90.0	-3185	False	ATTAAA	-16
PB.4382.5	chr16	+	4191	20	full-splice_match	RNF40	ENST00000324685.10	5634	20	319	1124	-6	2	multi-exon	FALSE	canonical	1	266913	junction_1	123648.1326972775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	117	3122	25.0	-6	True	AATAAA	-15
PB.812.4	chr1	-	2958	14	full-splice_match	KHDC4	ENST00000368321.7	2947	14	-11	0	-8	0	multi-exon	FALSE	canonical	1	157597	junction_3	108254.50055560915	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	36	1880	0.0	0	True	AATAAA	-16
PB.8405.3	chr3	+	2643	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	895	167	1	-5	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	178	1392	50.0	-10	True	AATAAA	-19
PB.3316.12	chr14	-	2515	14	novel_in_catalog	RBM23	novel	10040	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	5173	junction_13	204810.01711512604	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	152	1555	30.0	-1	True	NA	NA
PB.7240.1	chr20	+	2877	11	full-splice_match	CBFA2T2	ENST00000342704.10	2864	11	-18	5	-6	-5	multi-exon	TRUE	canonical	1	35408	junction_1	34760.780909525034	NA	1	1	TRUE	NA	NA	NA	C	coding	575	1728	260	1987	10.0	-85	False	NA	NA
PB.3316.10	chr14	-	3080	11	novel_in_catalog	RBM23	novel	10040	14	NA	NA	0	-4	intron_retention	FALSE	canonical	1	320589	junction_8	115276.10241715322	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	1209	2120	30.0	-1	True	NA	NA
PB.3316.11	chr14	-	2561	15	novel_in_catalog	RBM23	novel	10040	14	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	5173	junction_14	212898.61176775614	NA	2	NA	TRUE	NA	NA	NA	C	coding	483	1452	150	1601	30.0	1	True	NA	NA
PB.7938.15	chr3	-	3268	1	novel_in_catalog	VGLL4	novel	3725	6	NA	NA	-7	-38672	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-17	True	NA	NA
PB.812.3	chr1	-	3720	13	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-9	0	intron_retention	FALSE	canonical	1	239164	junction_12	95584.24058999824	NA	6	NA	TRUE	NA	NA	NA	C	coding	482	1449	37	1485	0.0	-1	True	AATAAA	-16
PB.373.2	chr1	-	1905	16	full-splice_match	MUTYH	ENST00000372115.7	1888	16	-19	2	-19	-1	multi-exon	FALSE	canonical	1	42251	junction_15	44836.70686906234	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	236	1843	15.0	-76	False	AGTAAA	-18
PB.6702.1	chr2	+	2369	9	novel_in_catalog	CBWD2	novel	1812	15	NA	NA	0	2722	intron_retention	FALSE	canonical	1	5047	junction_2	165940.83557283113	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	1649	2029	45.0	NA	False	AAAAAG	-25
PB.6702.2	chr2	+	559	3	full-splice_match	CBWD2	ENST00000490323.5	880	3	-39	360	9	-360	multi-exon	FALSE	canonical	1	22869	junction_2	13723.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	70	411	15.0	NA	False	AATAAA	-17
PB.6702.3	chr2	+	1495	11	novel_not_in_catalog	CBWD2	novel	1812	15	NA	NA	10	7008	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	156543.16849022827	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	69	794	20.0	NA	False	ATTAAA	-22
PB.6702.4	chr2	+	1533	11	novel_not_in_catalog	CBWD2	novel	1812	15	NA	NA	-7	7002	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	156543.16849022827	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	60	785	30.0	NA	False	ATTAAA	-16
PB.6702.5	chr2	+	2493	15	novel_in_catalog	CBWD2	novel	1812	15	NA	NA	-2	2	intron_retention	FALSE	canonical	1	5047	junction_2	148113.37180426886	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	1617	2435	30.0	NA	False	AATAAA	-20
PB.1051.37	chr1	+	6037	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	14281	junction_2	198350.33219257364	NA	2	1	TRUE	NA	NA	NA	C	coding	810	2433	1880	4312	25.0	31	False	AATAAA	-18
PB.5162.1	chr17	+	2047	5	incomplete-splice_match	TBX2	ENST00000240328.3	3339	7	3206	307	2737	-6	5prime_fragment	FALSE	canonical	1	164191	junction_3	45242.04248815475	NA	1	NA	TRUE	NA	NA	NA	B	coding	215	648	788	1435	35.0	-8750	False	AATAAA	-14
PB.3316.13	chr14	-	3220	7	novel_in_catalog	RBM23	novel	10040	14	NA	NA	1	176	intron_retention	FALSE	canonical	1	320589	junction_4	77444.9688251815	NA	2	1	TRUE	NA	NA	NA	C	coding	177	534	1224	1757	95.0	-16	True	NA	NA
PB.5162.3	chr17	+	3558	1	novel_in_catalog	TBX2	novel	3339	7	NA	NA	-3204	-49	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	147	444	2546	2989	70.0	-6334	False	NA	NA
PB.5162.2	chr17	+	2315	3	incomplete-splice_match	TBX2	ENST00000419047.5	3344	7	4591	2	4136	-2	5prime_fragment	FALSE	canonical	1	164191	junction_1	21890.5	NA	6	NA	TRUE	NA	NA	NA	B	coding	215	648	710	1357	20.0	-7351	False	AATAAA	-14
PB.6970.1	chr2	+	4259	1	incomplete-splice_match	ZDBF2	ENST00000374423.8	10296	5	35501	16	18101	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	399	1200	231	1430	15.0	NA	False	ATTAAA	-4
PB.6970.2	chr2	+	2985	1	incomplete-splice_match	ZDBF2	ENST00000374423.8	10296	5	36777	14	19377	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	ATTAAA	-6
PB.812.2	chr1	-	2860	14	novel_not_in_catalog	KHDC4	novel	2947	14	NA	NA	-13	1	any annotated donor/acceptor	FALSE	canonical	1	53615	junction_5	135118.29422087804	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	41	1192	0.0	-5	True	AATAAA	-17
PB.8405.1	chr3	+	2875	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	903	-73	7	73	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	1	1	TRUE	NA	NA	NA	C	coding	404	1215	170	1384	40.0	-2	True	AATGAA	-11
PB.373.1	chr1	-	2178	17	novel_not_in_catalog	MUTYH	novel	1029	7	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	62665.25769066541	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	533	2116	15.0	0	True	AGTAAA	-18
PB.3705.1	chr14	+	2764	20	novel_not_in_catalog	PACS2	novel	2944	24	NA	NA	-850	2	any annotated donor/acceptor	FALSE	canonical	1	21325	junction_7	117726.69549257342	NA	0	NA	TRUE	NA	NA	NA	A	coding	705	2118	111	2228	25.0	194	False	AATAAA	-32
PB.10453.1	chr7	+	3935	1	full-splice_match	HOTAIRM1	ENST00000593300.1	647	1	-3416	128	-30	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	62	189	165	353	80.0	-1545	False	NA	NA
PB.7641.4	chr22	+	3915	9	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5095	10918	intron_retention	FALSE	canonical	1	5091	junction_5	176846.43930805477	NA	3	NA	TRUE	NA	NA	NA	B	coding	135	408	1572	1979	25.0	-27	True	AATAAA	-21
PB.10453.3	chr7	+	3861	1	full-splice_match	RF01976	ENST00000616712.1	215	1	-2795	-851	-2795	851	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	224	675	1841	2515	10.0	-7	True	ATTAAA	-18
PB.11387.5	chr8	-	3452	11	full-splice_match	PARP10	ENST00000524918.5	3469	11	6	11	6	-4	multi-exon	FALSE	canonical	1	19865	junction_4	127228.45117818577	NA	0	NA	TRUE	NA	NA	NA	C	coding	1013	3042	91	3132	20.0	7	True	AATAAA	-30
PB.7641.6	chr22	+	5936	7	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5095	10918	intron_retention	FALSE	canonical	1	122360	junction_4	174769.85662833534	NA	2	NA	TRUE	NA	NA	NA	B	coding	135	408	3593	4000	25.0	-27	True	AATAAA	-21
PB.643.3	chr1	+	3035	9	full-splice_match	PTGFRN	ENST00000393203.2	6178	9	19	3124	19	-3116	multi-exon	FALSE	canonical	1	115467	junction_2	47345.625507405646	NA	1	NA	TRUE	NA	NA	NA	C	coding	879	2640	129	2768	15.0	19	True	NA	NA
PB.643.2	chr1	+	4307	9	full-splice_match	PTGFRN	ENST00000393203.2	6178	9	108	1763	108	-1755	multi-exon	FALSE	canonical	1	115467	junction_2	47345.625507405646	NA	2	NA	TRUE	NA	NA	NA	C	coding	879	2640	40	2679	35.0	108	False	AATAAA	-8
PB.643.1	chr1	+	6175	9	full-splice_match	PTGFRN	ENST00000393203.2	6178	9	1	2	1	-2	multi-exon	FALSE	canonical	1	115467	junction_2	47345.625507405646	NA	3	NA	TRUE	NA	NA	NA	C	coding	879	2640	147	2786	25.0	1	True	ATTAAA	-20
PB.9337.54	chr5	-	2353	1	full-splice_match	MEF2C	ENST00000629847.1	421	1	-1932	0	-12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	6331	False	AATAAA	-18
PB.9501.1	chr5	+	2368	8	novel_in_catalog	WDR55	novel	4080	7	NA	NA	-60	-1	combination_of_known_junctions	FALSE	canonical	1	80742	junction_7	99629.09602324094	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	106	1257	25.0	-5559	False	AGTAAA	-17
PB.9501.2	chr5	+	3927	7	full-splice_match	WDR55	ENST00000358337.9	4080	7	152	1	-40	0	multi-exon	FALSE	canonical	1	207266	junction_5	71333.75941461534	NA	2	NA	TRUE	NA	NA	NA	C	coding	383	1152	86	1237	25.0	-25	True	AGTAAA	-18
PB.9501.3	chr5	+	2589	6	novel_in_catalog	WDR55	novel	4080	7	NA	NA	-33	-1411	intron_retention	FALSE	canonical	1	207266	junction_4	78122.51948727715	NA	3	NA	TRUE	NA	NA	NA	C	coding	210	633	678	1310	70.0	-18	True	NA	NA
PB.9501.4	chr5	+	2508	6	full-splice_match	WDR55	ENST00000506393.5	2477	6	-31	0	-31	0	multi-exon	FALSE	canonical	1	80742	junction_5	114393.82467318767	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	1019	1396	25.0	-16	True	AGTAAA	-18
PB.9501.5	chr5	+	2412	7	novel_in_catalog	WDR55	novel	4080	7	NA	NA	-15	0	intron_retention	FALSE	canonical	1	80742	junction_6	104719.85458036758	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	61	840	25.0	0	True	AGTAAA	-18
PB.9501.6	chr5	+	2367	7	full-splice_match	WDR55	ENST00000358337.9	4080	7	324	1389	132	-1388	multi-exon	FALSE	canonical	1	207266	junction_5	71333.75941461534	NA	5	NA	TRUE	NA	NA	NA	C	coding	222	669	397	1065	60.0	-5367	False	AATAAA	-17
PB.9501.7	chr5	+	2614	6	novel_in_catalog	WDR55	novel	4080	7	NA	NA	2	-1359	intron_retention	FALSE	canonical	1	234825	junction_1	65607.18099415643	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	44	823	25.0	17	True	AATAAA	-14
PB.12089.2	chrX	+	2821	7	full-splice_match	TSPYL2	ENST00000375442.8	2815	7	-7	1	-7	0	multi-exon	FALSE	canonical	1	266005	junction_1	174931.67597442784	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	140	2221	15.0	-7	True	AATAAA	-16
PB.10115.5	chr6	+	3369	3	incomplete-splice_match	MANEA	ENST00000358812.8	4575	5	-11	10041	-11	-6607	3prime_fragment	FALSE	canonical	1	99871	junction_1	16709.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	146	835	85.0	-11	True	NA	NA
PB.8473.23	chr3	+	5430	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	15693	junction_5	346430.79833056213	NA	10	NA	TRUE	NA	NA	NA	C	coding	347	1044	974	2017	25.0	-1131	False	AATAAA	-37
PB.12089.3	chrX	+	2311	8	novel_not_in_catalog	TSPYL2	novel	2607	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	244240.24823989536	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	131	1711	15.0	2	True	AATAAA	-16
PB.409.3	chr1	-	3093	16	novel_not_in_catalog	ORC1	novel	3157	17	NA	NA	12	-4	any annotated donor/acceptor	FALSE	canonical	1	182	junction_8	70818.64976854614	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	1857	2747	15.0	-8	True	ATTAAA	-13
PB.409.2	chr1	-	3201	18	novel_not_in_catalog	ORC1	novel	3157	17	NA	NA	13	-3	any annotated donor/acceptor	FALSE	canonical	1	5791	junction_13	60248.88354301622	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	1007	2854	20.0	-7	True	ATTAAA	-14
PB.409.1	chr1	-	3144	17	full-splice_match	ORC1	ENST00000371568.7	3157	17	12	1	12	-1	multi-exon	FALSE	canonical	1	116958	junction_16	23913.32704324816	NA	1	NA	TRUE	NA	NA	NA	C	coding	861	2586	208	2793	25.0	-8	True	ATTAAA	-18
PB.7501.4	chr21	+	8195	12	novel_in_catalog	SON	novel	8813	12	NA	NA	-8	-139	combination_of_known_junctions	FALSE	canonical	1	99357	junction_7	374965.1925989182	NA	3	NA	TRUE	NA	NA	NA	C	coding	2459	7380	50	7429	50.0	-29	True	AATAAA	-30
PB.9305.12	chr5	-	1919	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	57	1982	-32	-22	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	320	1699	20.0	-33	False	AATATA	-20
PB.8448.2	chr3	+	4267	28	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-7	-49	combination_of_known_junctions	FALSE	canonical	1	338381	junction_23	179259.38693287462	NA	2	NA	TRUE	NA	NA	NA	C	coding	1028	3087	27	3113	50.0	1	True	AATAAA	-19
PB.12089.1	chrX	+	2850	7	novel_in_catalog	TSPYL2	novel	2607	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	251332.10060246979	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	1078	2250	15.0	-3698	False	AATAAA	-16
PB.7501.2	chr21	+	8400	12	full-splice_match	SON	ENST00000356577.8	8813	12	444	-31	-2	31	multi-exon	FALSE	canonical	1	73561	junction_11	388831.8571722868	NA	4	NA	TRUE	NA	NA	NA	C	coding	2426	7281	32	7312	50.0	-11	True	AATAAA	-32
PB.7192.5	chr20	-	2586	6	novel_not_in_catalog	RBBP9	novel	3861	5	NA	NA	12	-317	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67230.04847060576	NA	2	1	TRUE	NA	NA	NA	C	coding	186	561	65	625	15.0	-7	True	ATTAAA	-23
PB.7501.3	chr21	+	8339	12	novel_in_catalog	SON	novel	8813	12	NA	NA	-1	30	combination_of_known_junctions	FALSE	canonical	1	99357	junction_7	374965.1925989182	NA	4	NA	TRUE	NA	NA	NA	C	coding	2459	7380	25	7404	50.0	-4	True	AATAAA	-31
PB.10946.6	chr7	+	3046	7	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	77870	junction_1	676565.9140515964	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	286	1170	15.0	0	True	ATTAAA	-13
PB.6117.1	chr19	-	1469	5	full-splice_match	KDELR1	ENST00000330720.6	1557	5	86	2	35	-2	multi-exon	TRUE	canonical	1	2166275	junction_4	190173.83482290618	NA	0	NA	TRUE	NA	NA	NA	A	coding	212	639	110	748	0.0	7337	False	AATAAA	-19
PB.7501.1	chr21	+	7008	9	incomplete-splice_match	SON	ENST00000356577.8	8813	12	441	4085	-5	-3051	3prime_fragment	FALSE	canonical	1	99357	junction_7	418672.73079190386	NA	1	NA	TRUE	NA	NA	NA	C	coding	2324	6972	35	7006	70.0	-14	True	NA	NA
PB.12075.3	chrX	-	1430	11	full-splice_match	WDR45	ENST00000376372.8	1639	11	0	209	0	2	multi-exon	FALSE	canonical	1	114811	junction_7	149572.87627521242	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	183	1265	15.0	-33	True	AATAAA	-20
PB.12075.2	chrX	-	2595	9	novel_in_catalog	WDR45	novel	1432	8	NA	NA	-1	0	intron_retention	FALSE	canonical	1	170861	junction_8	147625.45918133497	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	1480	2235	20.0	-22	True	NA	NA
PB.11517.3	chr9	-	2349	14	novel_not_in_catalog	FANCG	novel	2108	13	NA	NA	-62	-2	intron_retention	FALSE	canonical	1	31031	junction_6	91764.23226776492	NA	0	NA	TRUE	NA	NA	NA	B	coding	616	1851	232	2082	20.0	-1	True	AGTAAA	-11
PB.6848.1	chr2	+	1524	7	novel_in_catalog	SCRN3	novel	1141	7	NA	NA	-1	-103	combination_of_known_junctions	FALSE	canonical	1	9929	junction_1	71522.62008778917	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	171	1205	40.0	-10	True	TATAAA	-13
PB.9406.8	chr5	-	4433	20	novel_in_catalog	SEMA6A	novel	6878	19	NA	NA	83	-3	combination_of_known_junctions	FALSE	canonical	1	1564	junction_14	71467.47027770562	NA	3	NA	TRUE	NA	NA	NA	C	coding	869	2610	1348	3957	65.0	174	False	AATACA	-10
PB.12075.1	chrX	-	1623	11	full-splice_match	WDR45	ENST00000376372.8	1639	11	12	4	0	0	multi-exon	FALSE	canonical	1	114811	junction_7	149572.87627521242	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	171	1253	15.0	-21	True	NA	NA
PB.9788.1	chr6	+	2463	2	full-splice_match	U91328.1	ENST00000606723.2	4130	2	-2	1669	-2	-1669	multi-exon	FALSE	canonical	1	25689	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-7	True	NA	NA
PB.11517.4	chr9	-	2242	13	novel_in_catalog	FANCG	novel	2108	13	NA	NA	-61	-2	intron_retention	FALSE	canonical	1	12632	junction_1	87445.86404821492	NA	0	NA	TRUE	NA	NA	NA	B	coding	551	1656	231	1886	20.0	0	True	AGTAAA	-11
PB.157.17	chr1	-	2381	9	full-splice_match	HNRNPR	ENST00000606561.5	1837	9	-3	-541	-3	-4	multi-exon	FALSE	canonical	1	118260	junction_7	576776.627215627	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	235	1719	50.0	-18	True	AATAAA	-17
PB.157.16	chr1	-	2521	10	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	48882	junction_5	599567.0976498147	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	135	1859	50.0	-3	True	AATAAA	-17
PB.157.15	chr1	-	2514	10	full-splice_match	HNRNPR	ENST00000478691.5	7646	10	28	5104	2	-4	multi-exon	FALSE	non_canonical	0	0	junction_4	597455.5304401376	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	245	1852	50.0	341	False	AATAAA	-17
PB.157.14	chr1	-	2691	11	novel_not_in_catalog	HNRNPR	novel	646	5	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	631694.0935045143	NA	4	NA	TRUE	NA	NA	NA	C	coding	636	1911	119	2029	50.0	-18	True	AATAAA	-17
PB.157.13	chr1	-	4292	8	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	0	-4	intron_retention	FALSE	canonical	1	118260	junction_6	616166.2072225815	NA	4	NA	TRUE	NA	NA	NA	C	coding	324	975	2656	3630	50.0	332	False	AATAAA	-17
PB.6848.3	chr2	+	3544	8	full-splice_match	SCRN3	ENST00000272732.10	3037	8	-12	-495	3	495	multi-exon	FALSE	canonical	1	43957	junction_1	59988.697972949834	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	95	1369	15.0	-6	True	NA	NA
PB.6891.1	chr2	+	1284	8	full-splice_match	FAM171B	ENST00000304698.9	5826	8	77	4465	-32	-4465	multi-exon	FALSE	canonical	1	83099	junction_4	27642.024132151557	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1158	127	1284	65.0	-14	True	NA	NA
PB.11702.3	chr9	+	7370	10	full-splice_match	FKTN	ENST00000223528.6	7364	10	-7	1	-7	-1	multi-exon	FALSE	canonical	1	16618	junction_1	24403.338434841902	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	132	1517	25.0	-9	True	AATAAA	-18
PB.7193.18	chr20	+	3076	21	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2904	junction_2	276266.8649149361	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	394	2697	10.0	0	True	AATACA	-13
PB.10570.6	chr7	+	2423	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	67	3405	-32	740	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	36	566	15.0	-29	True	NA	NA
PB.157.19	chr1	-	1917	10	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	1	-60	combination_of_known_junctions	FALSE	canonical	1	118260	junction_8	501768.801635761	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	258	1856	65.0	0	True	NA	NA
PB.6859.3	chr2	+	1453	11	full-splice_match	MTX2	ENST00000420864.5	1592	11	48	91	-9	-91	multi-exon	FALSE	canonical	1	32856	junction_1	279807.61979447596	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	422	1183	25.0	1	True	AATAAA	-15
PB.6671.3	chr2	-	4311	12	full-splice_match	TGFBRAP1	ENST00000393359.6	5979	12	364	1304	364	-1304	multi-exon	FALSE	canonical	1	23255	junction_11	61486.71485978035	NA	2	NA	TRUE	NA	NA	NA	C	coding	860	2583	64	2646	25.0	7822	False	AATAAA	-22
PB.4454.1	chr16	-	2425	9	full-splice_match	CCDC102A	ENST00000258214.2	2463	9	32	6	32	-6	multi-exon	FALSE	canonical	1	43116	junction_7	36799.690216087416	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	216	1868	60.0	0	True	NA	NA
PB.4454.2	chr16	-	2346	9	full-splice_match	CCDC102A	ENST00000258214.2	2463	9	-1	118	-1	91	multi-exon	FALSE	canonical	1	43116	junction_7	36799.690216087416	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	249	1901	35.0	415	False	AATAAA	-21
PB.12075.4	chrX	-	2306	10	novel_in_catalog	WDR45	novel	1432	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	147173	junction_7	147833.14668341802	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	1389	2144	20.0	-20	True	AATAAA	-17
PB.6671.1	chr2	-	5654	12	novel_not_in_catalog	TGFBRAP1	novel	5595	11	NA	NA	354	9	intron_retention	FALSE	canonical	1	17465	junction_11	62882.09148507379	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	71	2653	50.0	7812	False	NA	NA
PB.11180.3	chr8	+	2878	3	full-splice_match	MSC-AS1	ENST00000457356.8	4220	3	-9	1351	-9	-1351	multi-exon	FALSE	canonical	1	13338	junction_2	23319.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-52	True	AATAAA	-21
PB.11180.2	chr8	+	1607	4	novel_in_catalog	MSC-AS1	novel	485	4	NA	NA	-150	847	combination_of_known_junctions	FALSE	canonical	1	8508	junction_3	23972.84256542529	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-368	False	AATAAA	-17
PB.9444.1	chr5	-	3348	8	novel_in_catalog	SHROOM1	novel	4019	10	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	23983	junction_7	118277.39251644752	NA	1	NA	TRUE	NA	NA	NA	B	coding	852	2559	137	2695	20.0	218	False	AATAAA	-13
PB.7193.14	chr20	+	2645	20	full-splice_match	SEC23B	ENST00000336714.8	3464	20	424	395	4	-35	multi-exon	FALSE	canonical	1	304885	junction_1	189067.0767791464	NA	2	1	TRUE	NA	NA	NA	C	coding	767	2304	62	2365	15.0	4	True	AATAAA	-19
PB.10849.8	chr7	+	2389	18	novel_not_in_catalog	MKLN1	novel	2460	19	NA	NA	-5	1	any annotated donor/acceptor	FALSE	canonical	1	16142	junction_17	87470.99826696886	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	23	2113	50.0	-13	True	AATAAA	-26
PB.4199.1	chr16	+	3152	5	novel_in_catalog	ZNF213	novel	549	2	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	4297	junction_3	30092.999687427306	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	392	1063	10.0	-9114	False	AATAAA	-11
PB.4199.2	chr16	+	3221	6	full-splice_match	ZNF213	ENST00000396878.7	3313	6	90	2	-15	0	multi-exon	FALSE	canonical	1	52295	junction_1	10721.814230810009	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	386	1765	10.0	-9108	False	AATAAA	-12
PB.11180.4	chr8	+	2896	5	novel_in_catalog	MSC-AS1	novel	485	4	NA	NA	166	-1351	no_combination_of_known_junctions	FALSE	canonical	1	3274	junction_3	27389.893523889426	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	3	True	AATAAA	-21
PB.10849.4	chr7	+	3391	18	full-splice_match	MKLN1	ENST00000352689.10	11156	18	11	7754	11	920	multi-exon	FALSE	canonical	1	170190	junction_1	56423.1938035817	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	30	2237	25.0	-20	True	ATTAAA	-21
PB.10849.5	chr7	+	2842	18	full-splice_match	MKLN1	ENST00000352689.10	11156	18	11	8303	11	371	multi-exon	FALSE	canonical	1	170190	junction_1	56423.1938035817	NA	2	NA	TRUE	NA	NA	NA	C	coding	735	2208	30	2237	20.0	-20	True	ATTAAA	-15
PB.10849.6	chr7	+	3683	10	incomplete-splice_match	MKLN1	ENST00000494785.5	2386	17	-10	38480	-10	25777	3prime_fragment	FALSE	canonical	1	170190	junction_1	71474.1296861673	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	28	1206	75.0	-18	True	NA	NA
PB.10849.7	chr7	+	3143	8	incomplete-splice_match	MKLN1	ENST00000494785.5	2386	17	-10	61981	-10	2276	3prime_fragment	FALSE	canonical	1	170190	junction_1	57588.98846098257	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	28	882	100.0	-18	True	NA	NA
PB.10849.1	chr7	+	2385	18	full-splice_match	MKLN1	ENST00000352689.10	11156	18	97	8674	60	0	multi-exon	FALSE	canonical	1	170190	junction_1	56423.1938035817	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	220	2151	55.0	-8294	False	AATAAA	-25
PB.10849.2	chr7	+	5732	18	full-splice_match	MKLN1	ENST00000352689.10	11156	18	9	5415	9	682	multi-exon	FALSE	canonical	1	170190	junction_1	56423.1938035817	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	32	2239	55.0	-22	True	AATAAA	-15
PB.10849.3	chr7	+	7244	18	full-splice_match	MKLN1	ENST00000352689.10	11156	18	10	3902	10	2195	multi-exon	FALSE	canonical	1	170190	junction_1	56423.1938035817	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	31	2238	95.0	-21	True	NA	NA
PB.6782.1	chr2	-	5449	14	full-splice_match	STAM2	ENST00000263904.4	5701	14	251	1	0	-1	multi-exon	FALSE	canonical	1	138483	junction_13	48716.85664175444	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	100	1677	25.0	20	True	NA	NA
PB.6782.2	chr2	-	5350	15	novel_not_in_catalog	STAM2	novel	5701	14	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	74858.59789248374	NA	4	NA	TRUE	NA	NA	NA	C	coding	525	1578	101	1678	25.0	19	True	NA	NA
PB.6782.3	chr2	-	4163	14	full-splice_match	STAM2	ENST00000263904.4	5701	14	229	1309	-14	-1309	multi-exon	FALSE	canonical	1	138483	junction_13	48716.85664175444	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	122	1699	40.0	-2	True	AATAAA	-25
PB.6782.4	chr2	-	3953	14	full-splice_match	STAM2	ENST00000263904.4	5701	14	239	1509	-4	-1509	multi-exon	FALSE	canonical	1	138483	junction_13	48716.85664175444	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	112	1689	15.0	8	True	GATAAA	-16
PB.6671.5	chr2	-	2988	13	novel_not_in_catalog	TGFBRAP1	novel	5595	11	NA	NA	373	-29	intron_retention	FALSE	canonical	1	1150	junction_12	81293.48320745028	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	173	2755	60.0	7831	False	NA	NA
PB.6782.6	chr2	-	3582	15	novel_not_in_catalog	STAM2	novel	5701	14	NA	NA	-16	-1792	any annotated donor/acceptor	FALSE	canonical	1	2166	junction_1	74424.90986935238	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	124	1701	35.0	-4	True	AATAAA	-25
PB.2231.8	chr11	-	1674	3	novel_in_catalog	CWC15	novel	1576	7	NA	NA	-2	458	intron_retention	FALSE	canonical	1	1135761	junction_2	125149.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-19	True	NA	NA
PB.2231.7	chr11	-	2000	5	novel_in_catalog	CWC15	novel	1576	7	NA	NA	-5	-10	intron_retention	FALSE	canonical	1	1135761	junction_4	137517.05810644	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-22	True	ATTAAA	-37
PB.2231.6	chr11	-	1694	6	novel_in_catalog	CWC15	novel	1576	7	NA	NA	-5	-7	intron_retention	FALSE	canonical	1	1135761	junction_5	170500.0578352981	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	89	451	30.0	-22	True	ATTAAA	-40
PB.11792.6	chr9	+	2625	9	full-splice_match	PBX3	ENST00000373489.9	2775	9	146	4	130	-4	multi-exon	FALSE	canonical	1	136738	junction_7	92548.83430080305	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	30	1175	25.0	0	True	AATAAA	-18
PB.2231.4	chr11	-	822	7	full-splice_match	CWC15	ENST00000279839.7	1576	7	36	718	-4	2	multi-exon	FALSE	canonical	1	1135761	junction_6	172337.16264636596	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	88	777	20.0	-21	True	ATTAAA	-22
PB.2231.3	chr11	-	2655	5	incomplete-splice_match	CWC15	ENST00000621358.4	1113	6	11	-249	-3	223	intron_retention	FALSE	canonical	1	1214308	junction_2	130119.35504566567	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-20	True	AATAAA	-20
PB.2231.2	chr11	-	1042	7	full-splice_match	CWC15	ENST00000279839.7	1576	7	38	496	-2	224	multi-exon	FALSE	canonical	1	1135761	junction_6	172337.16264636596	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	86	775	25.0	-19	True	AATAAA	-21
PB.2231.1	chr11	-	1840	6	full-splice_match	CWC15	ENST00000621358.4	1113	6	13	-740	-1	-6	multi-exon	FALSE	canonical	1	1135761	junction_5	160450.31887609325	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-18	True	AATAAA	-9
PB.11792.3	chr9	+	2323	9	novel_not_in_catalog	PBX3	novel	2755	8	NA	NA	-628	-432	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125424.98374825488	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	110	1165	50.0	9	True	CATAAA	-25
PB.9133.1	chr5	+	2682	7	novel_not_in_catalog	SRD5A1	novel	7132	5	NA	NA	-30	242	any annotated donor/acceptor	FALSE	canonical	1	3020	junction_2	24612.68688208493	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	265	645	5.0	-371	False	NA	NA
PB.6911.11	chr2	+	2311	19	incomplete-splice_match	MYO1B	ENST00000392318.7	5082	31	16	33179	16	3929	3prime_fragment	FALSE	canonical	1	212641	junction_1	118077.23252814732	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2079	232	2310	40.0	-3	True	NA	NA
PB.465.38	chr1	-	2234	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	379	4063	336	512	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	271	900	40.0	381	False	ATTAAA	-21
PB.9023.2	chr4	+	863	6	full-splice_match	RPS3A	ENST00000274065.8	934	6	55	16	0	-1	multi-exon	FALSE	canonical	1	6600	junction_3	78288.41946801583	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	26	820	20.0	0	True	AATAAA	-15
PB.11292.1	chr8	+	1894	6	full-splice_match	RIMS2	ENST00000523362.5	1062	6	-41	-791	-12	668	multi-exon	FALSE	canonical	1	4558	junction_1	21894.824036744394	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	330	1187	90.0	-11	True	GGGGCT	-10
PB.2790.5	chr12	+	3298	14	full-splice_match	TMTC3	ENST00000266712.10	7203	14	14	3891	3	-3891	multi-exon	FALSE	canonical	1	96375	junction_1	31631.91575799212	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	207	2951	20.0	3	True	ATTAAA	-44
PB.2790.4	chr12	+	6334	14	full-splice_match	TMTC3	ENST00000266712.10	7203	14	12	857	1	-857	multi-exon	FALSE	canonical	1	96375	junction_1	31631.91575799212	NA	8	1	TRUE	NA	NA	NA	C	coding	914	2745	209	2953	15.0	1	True	ATTAAA	-21
PB.2790.6	chr12	+	2513	14	full-splice_match	TMTC3	ENST00000266712.10	7203	14	54	4636	43	-4636	multi-exon	FALSE	canonical	1	96375	junction_1	31631.91575799212	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2346	167	2512	65.0	7	True	AAAACA	-24
PB.2790.1	chr12	+	5995	14	full-splice_match	TMTC3	ENST00000266712.10	7203	14	0	1208	0	-1208	multi-exon	FALSE	canonical	1	96375	junction_1	31631.91575799212	NA	2	NA	TRUE	NA	NA	NA	C	coding	914	2745	221	2965	35.0	-11	True	AATAAA	-21
PB.6896.13	chr2	+	3634	20	novel_not_in_catalog	WDR75	novel	2701	21	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	180090.87582117753	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	1674	3500	45.0	8	True	AATAAA	-28
PB.2790.3	chr12	+	2454	14	full-splice_match	TMTC3	ENST00000266712.10	7203	14	11	4738	0	-4738	multi-exon	FALSE	canonical	1	96375	junction_1	31631.91575799212	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	210	2453	60.0	0	True	TTTAAA	-21
PB.2790.2	chr12	+	2862	14	full-splice_match	TMTC3	ENST00000266712.10	7203	14	11	4330	0	-4330	multi-exon	FALSE	canonical	1	96375	junction_1	31631.91575799212	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2652	210	2861	70.0	0	True	NA	NA
PB.6885.1	chr2	-	4151	31	full-splice_match	NCKAP1	ENST00000361354.8	20347	31	423	15773	423	-11	multi-exon	FALSE	canonical	1	410055	junction_30	243991.209262021	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	29	3337	25.0	451	False	AATAAA	-17
PB.6885.7	chr2	-	3290	13	novel_in_catalog	NCKAP1	novel	20347	31	NA	NA	2499	-11	intron_retention	FALSE	canonical	1	602678	junction_8	193638.26307139185	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	1172	2476	25.0	NA	False	AATAAA	-17
PB.4867.4	chr17	-	2968	1	incomplete-splice_match	NUFIP2	ENST00000225388.8	10850	4	33814	1501	33811	-1501	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	3552	False	AATAAA	-24
PB.4867.2	chr17	-	2877	1	incomplete-splice_match	NUFIP2	ENST00000225388.8	10850	4	35402	4	35399	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	5140	False	AATAAA	-15
PB.4867.3	chr17	-	4203	1	incomplete-splice_match	NUFIP2	ENST00000225388.8	10850	4	32580	1500	32577	-1500	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	2318	False	AATAAA	-25
PB.4867.1	chr17	-	3638	1	incomplete-splice_match	NUFIP2	ENST00000225388.8	10850	4	34642	3	34639	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	4380	False	AATAAA	-16
PB.11587.4	chr9	+	4229	5	full-splice_match	ZNF658	ENST00000621410.4	4025	5	30	-234	21	234	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	129	3302	30.0	NA	False	AATAAA	-33
PB.9033.21	chr4	+	4834	34	novel_in_catalog	TMEM131L	novel	5017	35	NA	NA	15	-90	no_combination_of_known_junctions	FALSE	canonical	1	4244	junction_7	113102.14676259927	NA	3	NA	TRUE	NA	NA	NA	C	coding	1584	4755	35	4789	30.0	4	True	AATAAA	-14
PB.9305.13	chr5	-	1517	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	280	2161	0	-201	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	97	1476	30.0	-1	True	ATTAAA	-28
PB.11587.1	chr9	+	3522	5	full-splice_match	ZNF658	ENST00000621410.4	4025	5	5	498	-3	-485	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	154	3327	85.0	NA	False	GATAAA	-24
PB.11587.2	chr9	+	4147	5	full-splice_match	ZNF658	ENST00000612867.4	4160	5	7	6	7	-6	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	300	3473	40.0	NA	False	AATAAA	-14
PB.9033.20	chr4	+	4877	35	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	15	-88	any annotated donor/acceptor	FALSE	canonical	1	6682	junction_13	112112.81794842418	NA	0	NA	TRUE	NA	NA	NA	C	coding	1103	3312	1519	4830	30.0	4	True	AATAAA	-16
PB.6910.72	chr2	-	2007	20	incomplete-splice_match	STAT1	ENST00000452281.5	2594	22	71	3298	11	-434	3prime_fragment	FALSE	canonical	1	21148	junction_13	394845.5266459547	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	296	877	15.0	2	True	NA	NA
PB.9033.23	chr4	+	5284	34	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	6554	-3	any annotated donor/acceptor	FALSE	canonical	1	2429	junction_1	111166.87116889677	NA	1	NA	TRUE	NA	NA	NA	C	coding	1462	4389	764	5152	15.0	-17	False	AATAAA	-11
PB.6756.10	chr2	+	4421	25	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	43736	junction_3	111670.00652029648	NA	3	NA	TRUE	NA	NA	NA	C	coding	1013	3042	408	3449	20.0	-16	True	AATAAA	-10
PB.9581.1	chr5	+	2166	1	novel_in_catalog	MFAP3	novel	643	3	NA	NA	-1	-8640	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-5	True	NA	NA
PB.9581.2	chr5	+	2618	3	full-splice_match	MFAP3	ENST00000522782.5	643	3	62	-2037	0	-1	multi-exon	FALSE	canonical	1	39415	junction_1	68477.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	211	1299	15.0	-4	True	AATAAA	-14
PB.9581.3	chr5	+	3913	3	full-splice_match	MFAP3	ENST00000522782.5	643	3	65	-3335	3	1297	multi-exon	FALSE	canonical	1	39415	junction_1	68477.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	208	1296	25.0	-1	True	ATTAAA	-15
PB.9581.4	chr5	+	4947	3	full-splice_match	MFAP3	ENST00000522782.5	643	3	71	-4375	3	2337	multi-exon	FALSE	canonical	1	39415	junction_1	68477.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	202	1290	25.0	5	True	AATAAA	-13
PB.9581.5	chr5	+	2734	4	novel_not_in_catalog	MFAP3	novel	643	3	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	2209	junction_2	16577.484033739525	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	605	1417	15.0	4	True	AATAAA	-12
PB.9581.6	chr5	+	4583	1	novel_in_catalog	MFAP3	novel	643	3	NA	NA	-7	-6204	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	14	True	NA	NA
PB.9581.7	chr5	+	4238	3	full-splice_match	MFAP3	ENST00000522782.5	643	3	81	-3676	-6	1638	multi-exon	FALSE	canonical	1	39415	junction_1	68477.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	192	1280	60.0	15	True	AATACA	-7
PB.10657.3	chr7	+	3553	4	full-splice_match	CLDN12	ENST00000496677.5	1098	4	87	-2542	2	-1	multi-exon	FALSE	canonical	1	14474	junction_2	122640.41702744926	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	277	1011	5.0	-27	True	ATTAAA	-16
PB.10657.2	chr7	+	3576	4	novel_not_in_catalog	CLDN12	novel	1163	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	361	junction_3	130448.05777354022	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	301	1035	10.0	-29	True	AATAAA	-45
PB.10657.1	chr7	+	3454	3	full-splice_match	CLDN12	ENST00000287916.8	3565	3	82	29	1	-29	multi-exon	FALSE	canonical	1	156343	junction_2	60444.0	NA	20	NA	TRUE	NA	NA	NA	C	coding	244	735	206	940	45.0	1	True	AATAAA	-18
PB.10657.7	chr7	+	3531	3	full-splice_match	CLDN12	ENST00000427904.1	618	3	-15	-2898	-15	-1	multi-exon	FALSE	canonical	1	1644	junction_1	77349.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	255	989	5.0	-9676	False	ATTAAA	-16
PB.10657.6	chr7	+	3374	3	novel_not_in_catalog	CLDN12	novel	1163	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	164	junction_2	138533.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	303	833	10.0	0	True	AATAAA	-45
PB.10657.5	chr7	+	4118	3	full-splice_match	CLDN12	ENST00000462636.5	724	3	77	-3471	0	-3	multi-exon	FALSE	canonical	1	14474	junction_2	131378.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	844	1578	10.0	0	True	AATAAA	-44
PB.10657.4	chr7	+	3001	3	full-splice_match	CLDN12	ENST00000287916.8	3565	3	62	502	0	-502	multi-exon	FALSE	canonical	1	156343	junction_2	60444.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	226	960	15.0	-19	True	AATAAA	-32
PB.421.9	chr1	-	3806	18	full-splice_match	NDC1	ENST00000371429.3	5134	18	580	748	183	-748	multi-exon	FALSE	canonical	1	145265	junction_17	87832.13693369357	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	20	2044	35.0	15	True	AATAAA	-26
PB.421.5	chr1	-	4629	17	novel_in_catalog	NDC1	novel	5134	18	NA	NA	-38	-25	combination_of_known_junctions	FALSE	canonical	1	16575	junction_16	104890.96759505721	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	489	2144	60.0	-8	True	AATAAA	-11
PB.421.4	chr1	-	4688	18	novel_not_in_catalog	NDC1	novel	5134	18	NA	NA	339	-8	any annotated donor/acceptor	TRUE	canonical	1	2277	junction_17	111076.46898592259	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	165	2186	35.0	452	False	AATAAA	-28
PB.4463.2	chr16	-	4227	1	novel_in_catalog	CSNK2A2	novel	1569	11	NA	NA	3613	-323	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	B	coding	140	423	2843	3265	5.0	-849	False	AATAAA	-14
PB.4463.3	chr16	-	3075	1	novel_in_catalog	CSNK2A2	novel	1569	11	NA	NA	4765	-323	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	140	423	1691	2113	5.0	303	False	AATAAA	-14
PB.4463.1	chr16	-	4258	1	novel_in_catalog	CSNK2A2	novel	1569	11	NA	NA	3897	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	140	423	2559	2981	35.0	-565	False	AATAAA	-37
PB.4773.10	chr17	-	4751	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	4	-1220	4	-185	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	308	1558	5.0	3	True	AATAAA	-30
PB.4773.11	chr17	-	4674	13	novel_in_catalog	GAS7	novel	8003	14	NA	NA	-5	-185	combination_of_known_junctions	FALSE	canonical	1	38728	junction_10	117910.30444117139	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	438	1481	5.0	-6	True	AATAAA	-30
PB.4773.12	chr17	-	4595	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	-50	-1010	-50	-395	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	362	1612	65.0	31	False	NA	NA
PB.4773.13	chr17	-	4362	13	novel_in_catalog	GAS7	novel	8003	14	NA	NA	12	-395	combination_of_known_junctions	FALSE	canonical	1	38728	junction_10	117910.30444117139	NA	13	NA	TRUE	NA	NA	NA	C	coding	347	1044	336	1379	65.0	6	True	NA	NA
PB.4773.14	chr17	-	4166	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	-79	-552	-79	552	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	391	1641	20.0	2	True	NA	NA
PB.4773.15	chr17	-	3673	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7135	2	any annotated donor/acceptor	FALSE	canonical	1	19749	junction_13	97951.51164958032	NA	7	NA	TRUE	NA	NA	NA	C	coding	441	1326	373	1698	25.0	7102	False	NA	NA
PB.4773.16	chr17	-	3457	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	80	-2	0	2	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	232	1482	25.0	-11	True	NA	NA
PB.4773.17	chr17	-	3297	13	novel_in_catalog	GAS7	novel	8003	14	NA	NA	-132	-284	combination_of_known_junctions	FALSE	canonical	1	38728	junction_10	117910.30444117139	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	565	1608	15.0	-51	False	AGTAAA	-13
PB.4773.18	chr17	-	3397	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7115	-294	any annotated donor/acceptor	FALSE	canonical	1	19749	junction_13	97951.51164958032	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	393	1718	20.0	7082	False	AGTAAA	-3
PB.4773.19	chr17	-	3153	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	88	294	3	-294	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	224	1474	20.0	-3	True	AGTAAA	-3
PB.8629.8	chr3	-	2038	4	full-splice_match	NCBP2	ENST00000321256.9	2169	4	70	61	-4	-34	multi-exon	FALSE	canonical	1	539606	junction_3	251892.0439037327	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	25	495	25.0	-2	True	AGTAAA	-26
PB.6476.25	chr2	-	4510	18	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-65	0	any annotated donor/acceptor	FALSE	canonical	1	10137	junction_7	160069.45421708794	NA	4	NA	TRUE	NA	NA	NA	C	coding	860	2583	395	2977	15.0	-6	True	ATTAAA	-20
PB.8473.46	chr3	+	5199	11	novel_not_in_catalog	MBNL1	novel	1039	3	NA	NA	169	-1	any annotated donor/acceptor	FALSE	canonical	1	1491	junction_1	428816.7730934157	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	915	1787	25.0	-768	False	AATAAA	-36
PB.6476.27	chr2	-	3705	15	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	41591	junction_12	132023.0829489754	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	343	2172	15.0	1223	False	ATTAAA	-20
PB.9890.8	chr6	+	3802	28	full-splice_match	SKIV2L	ENST00000375394.6	3894	28	91	1	0	-1	multi-exon	FALSE	canonical	1	236602	junction_1	79188.42815262814	NA	0	NA	TRUE	NA	NA	NA	C	coding	1246	3741	23	3763	5.0	-4	True	GATAAA	-12
PB.6476.21	chr2	-	4385	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-35	1	any annotated donor/acceptor	FALSE	canonical	1	10137	junction_7	158893.81153653964	NA	4	NA	TRUE	NA	NA	NA	C	coding	828	2487	365	2851	15.0	-3	True	ATTAAA	-21
PB.6476.20	chr2	-	4401	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	139720.73062849112	NA	4	2	TRUE	NA	NA	NA	C	coding	725	2178	690	2867	15.0	-11	True	ATTAAA	-21
PB.6476.23	chr2	-	4222	15	full-splice_match	PPP4R3B	ENST00000611717.4	5243	15	-64	1085	-64	1	multi-exon	FALSE	canonical	1	34210	junction_5	133578.55020334877	NA	2	NA	TRUE	NA	NA	NA	C	coding	764	2295	394	2688	15.0	-5	True	ATTAAA	-21
PB.6476.22	chr2	-	4360	16	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-106	1	combination_of_known_junctions	FALSE	canonical	1	34210	junction_5	138875.45821848998	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	436	2826	15.0	4	True	ATTAAA	-21
PB.9890.3	chr6	+	3857	28	novel_not_in_catalog	SKIV2L	novel	3894	28	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	184	junction_23	105547.41072284197	NA	2	NA	TRUE	NA	NA	NA	C	coding	1255	3768	50	3817	5.0	-31	True	GATAAA	-13
PB.9890.2	chr6	+	4167	26	novel_in_catalog	SKIV2L	novel	3894	28	NA	NA	-2	0	intron_retention	FALSE	canonical	1	236602	junction_1	79231.01773173433	NA	1	NA	TRUE	NA	NA	NA	C	coding	990	2973	55	3027	20.0	-36	True	GATAAA	-6
PB.9890.1	chr6	+	4001	27	novel_in_catalog	SKIV2L	novel	3894	28	NA	NA	6	0	intron_retention	FALSE	canonical	1	44023	junction_24	102025.25773706041	NA	8	2	TRUE	NA	NA	NA	C	coding	1031	3096	71	3166	20.0	-170	False	GATAAA	-6
PB.9890.7	chr6	+	4207	26	novel_in_catalog	SKIV2L	novel	3894	28	NA	NA	0	2	intron_retention	FALSE	canonical	1	44023	junction_23	103038.47074667986	NA	17	3	TRUE	NA	NA	NA	C	coding	990	2973	23	2995	5.0	-4	True	GATAAA	-15
PB.9890.6	chr6	+	4655	22	novel_in_catalog	SKIV2L	novel	3894	28	NA	NA	0	-8	intron_retention	FALSE	canonical	1	236602	junction_1	85432.34839328092	NA	29	NA	TRUE	NA	NA	NA	C	coding	495	1488	1846	3333	45.0	-4	True	AAAACA	-8
PB.9890.5	chr6	+	4164	25	incomplete-splice_match	SKIV2L	ENST00000375394.6	3894	28	86	2	-5	2	intron_retention	FALSE	canonical	1	236602	junction_1	82175.07764062689	NA	6	1	TRUE	NA	NA	NA	C	coding	1098	3297	28	3324	10.0	-9	True	GATAAA	-11
PB.9890.4	chr6	+	3916	27	incomplete-splice_match	SKIV2L	ENST00000375394.6	3894	28	65	7	4	0	intron_retention	FALSE	canonical	1	236602	junction_1	79521.91813288977	NA	1	NA	TRUE	NA	NA	NA	C	coding	1183	3552	49	3600	20.0	-30	True	GATAAA	-6
PB.11597.3	chr9	+	5980	25	full-splice_match	SMC5	ENST00000361138.6	5980	25	-15	15	-15	-15	multi-exon	FALSE	canonical	1	64273	junction_15	65400.33843949127	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	133	3438	15.0	-31	True	AATAAA	-18
PB.11597.2	chr9	+	2715	21	incomplete-splice_match	SMC5	ENST00000361138.6	5980	25	83	7259	83	2955	3prime_fragment	FALSE	canonical	1	64273	junction_15	68986.60321765378	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2679	35	2713	70.0	-5	True	AATATA	-2
PB.429.3	chr1	+	1966	10	full-splice_match	TTC4	ENST00000371281.3	2395	10	22	407	-21	-57	multi-exon	FALSE	canonical	1	61550	junction_7	59595.24581978824	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	66	1229	15.0	-21	True	TTTAAA	-38
PB.11597.7	chr9	+	5933	24	novel_in_catalog	SMC5	novel	5980	25	NA	NA	-13	-15	no_combination_of_known_junctions	FALSE	canonical	1	64273	junction_15	70383.1012239296	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	131	3391	15.0	-29	True	AATAAA	-18
PB.11597.6	chr9	+	4474	25	full-splice_match	SMC5	ENST00000361138.6	5980	25	-13	1519	-13	1124	multi-exon	FALSE	canonical	1	64273	junction_15	65400.33843949127	NA	2	NA	TRUE	NA	NA	NA	C	coding	1101	3306	131	3436	65.0	-29	True	TTTAAA	-18
PB.11597.5	chr9	+	4681	25	full-splice_match	SMC5	ENST00000361138.6	5980	25	-13	1312	-13	-1312	multi-exon	FALSE	canonical	1	64273	junction_15	65400.33843949127	NA	2	1	TRUE	NA	NA	NA	C	coding	1101	3306	131	3436	15.0	-29	True	AATAAA	-17
PB.435.5	chr1	-	6590	34	incomplete-splice_match	USP24	ENST00000294383.6	10549	68	90473	11	29277	-11	5prime_fragment	TRUE	canonical	1	143476	junction_27	97185.14471906761	NA	1	NA	TRUE	NA	NA	NA	A	coding	1299	3900	16	3915	40.0	NA	False	AATAAA	-5
PB.10079.2	chr6	-	5932	30	novel_not_in_catalog	IBTK	novel	6054	29	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	9298	junction_4	101341.36878975308	NA	0	NA	TRUE	NA	NA	NA	C	coding	1394	4185	559	4743	20.0	-19	False	AATAAA	-24
PB.11597.9	chr9	+	2621	19	novel_in_catalog	SMC5	novel	5980	25	NA	NA	6	2955	no_combination_of_known_junctions	FALSE	canonical	1	7683	junction_17	83799.5008251434	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2508	112	2619	70.0	-10	True	AATATA	-2
PB.11597.8	chr9	+	3546	25	novel_not_in_catalog	SMC5	novel	5980	25	NA	NA	-11	172	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	76109.82998870594	NA	1	NA	TRUE	NA	NA	NA	C	coding	880	2643	129	2771	45.0	-27	True	AATAAA	-14
PB.8635.1	chr3	-	3194	4	intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	25	junction_2	5240.691133386469	NA	0	NA	FALSE	NA	NA	NA	A	coding	17	54	704	757	45.0	NA	False	NA	NA
PB.8635.3	chr3	-	4907	1	intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	A	coding	128	387	3586	3972	70.0	NA	False	NA	NA
PB.8292.31	chr3	-	3102	1	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	-3	-6553	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-16	True	AATAAA	-20
PB.1153.24	chr1	+	1796	5	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-1	1660	any annotated donor/acceptor	FALSE	canonical	1	66	junction_4	2129.0774263750955	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	ATTAAA	-17
PB.7043.48	chr2	-	1694	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	3	190	no_combination_of_known_junctions	FALSE	canonical	1	2031	junction_1	627272.2062086909	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	210	1319	50.0	0	True	AAGAAA	-18
PB.1153.25	chr1	+	1846	6	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-11	1658	any annotated donor/acceptor	FALSE	canonical	1	115	junction_5	2075.5589512225374	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	12	True	ATTAAA	-15
PB.6877.6	chr2	-	2528	18	full-splice_match	SESTD1	ENST00000428443.7	10615	18	216	7871	51	-211	multi-exon	FALSE	canonical	1	81018	junction_17	46921.10088989519	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	102	2192	75.0	-26	True	NA	NA
PB.6877.5	chr2	-	2891	18	full-splice_match	SESTD1	ENST00000428443.7	10615	18	112	7612	-53	18	multi-exon	FALSE	canonical	1	81018	junction_17	46921.10088989519	NA	5	NA	TRUE	NA	NA	NA	C	coding	696	2091	206	2296	35.0	1	True	AATAAA	-20
PB.6877.4	chr2	-	3541	18	full-splice_match	SESTD1	ENST00000428443.7	10615	18	-35	7109	-35	521	multi-exon	FALSE	canonical	1	81018	junction_17	46921.10088989519	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	353	2443	20.0	-35	True	AATAAA	-18
PB.6877.3	chr2	-	3344	17	novel_in_catalog	SESTD1	novel	10615	18	NA	NA	52	656	no_combination_of_known_junctions	FALSE	canonical	1	1093	junction_16	57422.005198321785	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	138	2111	15.0	-25	True	ATTAAA	-42
PB.6877.2	chr2	-	3635	18	full-splice_match	SESTD1	ENST00000428443.7	10615	18	-4	6984	-4	646	multi-exon	FALSE	canonical	1	81018	junction_17	46921.10088989519	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	322	2412	40.0	-4	True	ATTAAA	-32
PB.6877.1	chr2	-	7118	18	full-splice_match	SESTD1	ENST00000428443.7	10615	18	-6	3503	-6	-3503	multi-exon	FALSE	canonical	1	81018	junction_17	46921.10088989519	NA	2	NA	TRUE	NA	NA	NA	C	coding	696	2091	324	2414	85.0	-6	True	CATAAA	-31
PB.9594.8	chr5	-	3657	13	novel_not_in_catalog	CLINT1	novel	3987	12	NA	NA	-13	-4	any annotated donor/acceptor	FALSE	canonical	1	421	junction_12	317073.0850676754	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	348	2306	40.0	-32	True	ATTAAA	-10
PB.9594.9	chr5	-	3383	11	novel_in_catalog	CLINT1	novel	3987	12	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	9705	junction_3	284348.4527399437	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	176	2032	40.0	-19	True	ATTAAA	-10
PB.9594.2	chr5	-	3387	12	novel_in_catalog	CLINT1	novel	3987	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	5838	junction_11	256326.43138440576	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	206	2029	15.0	-18	True	ATTAAA	-17
PB.9594.3	chr5	-	3385	12	full-splice_match	CLINT1	ENST00000530742.5	3344	12	-42	1	0	-1	multi-exon	FALSE	canonical	1	3823	junction_11	270697.26194379537	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	150	2027	15.0	-49	True	ATTAAA	-17
PB.1153.23	chr1	+	2010	5	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-1	10155	any annotated donor/acceptor	FALSE	canonical	1	798	junction_4	1953.9442641743904	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	1563	1979	25.0	0	True	NA	NA
PB.9594.6	chr5	-	3316	11	novel_in_catalog	CLINT1	novel	3987	12	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	9705	junction_3	270791.07683756866	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	157	1959	20.0	0	True	ATTAAA	-16
PB.9594.7	chr5	-	3392	12	full-splice_match	CLINT1	ENST00000411809.6	3440	12	45	3	3	-1	multi-exon	FALSE	canonical	1	432846	junction_2	164381.50245020003	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	161	2038	25.0	-4	True	ATTAAA	-13
PB.9594.4	chr5	-	3398	12	full-splice_match	CLINT1	ENST00000523908.5	2346	12	16	-1068	6	-46	multi-exon	FALSE	canonical	1	297941	junction_2	188177.4856262781	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	158	2089	25.0	-1	True	ATTAAA	-24
PB.9186.4	chr5	-	4593	35	full-splice_match	NUP155	ENST00000231498.7	8143	35	65	3485	-13	11	multi-exon	FALSE	canonical	1	221976	junction_34	73699.37499615265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1382	4149	167	4315	35.0	347	False	ATTAAA	-30
PB.7411.11	chr20	+	2671	7	novel_not_in_catalog	BIRC7	novel	1302	7	NA	NA	38	-1	any annotated donor/acceptor	FALSE	canonical	1	1372	junction_1	9520.90592678379	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	797	1309	25.0	-12	True	AATAAA	-20
PB.9032.9	chr4	+	2601	11	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-15	-1026	no_combination_of_known_junctions	FALSE	canonical	1	1586	junction_1	69644.12556562111	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	120	2231	80.0	-16	True	NA	NA
PB.11774.4	chr9	-	1740	2	full-splice_match	ZBTB6	ENST00000373659.3	4106	2	3	2363	3	-2363	multi-exon	FALSE	canonical	1	103632	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	87	1361	65.0	-16	True	TATAAA	-36
PB.4875.7	chr17	+	2959	7	full-splice_match	NSRP1	ENST00000580103.6	774	7	-342	-1843	0	-1	multi-exon	FALSE	canonical	1	38871	junction_1	43241.71942985154	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	646	2160	30.0	1	True	AATAAA	-20
PB.4875.6	chr17	+	2591	8	novel_in_catalog	NSRP1	novel	2057	7	NA	NA	-1	-8	no_combination_of_known_junctions	FALSE	canonical	1	2563	junction_3	68045.95677022633	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	285	1799	25.0	-11	True	AATAAA	-13
PB.4875.5	chr17	+	1926	6	full-splice_match	NSRP1	ENST00000612959.4	2420	6	10	484	-2	143	multi-exon	FALSE	canonical	1	32961	junction_1	41670.71026032553	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	96	1610	20.0	-12	True	ATTAAA	-14
PB.4875.4	chr17	+	2504	7	full-splice_match	NSRP1	ENST00000247026.9	2541	7	36	1	-2	0	multi-exon	FALSE	canonical	1	41435	junction_2	49776.427729119154	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	28	1704	35.0	-12	True	AATAAA	-21
PB.4875.3	chr17	+	1471	7	full-splice_match	NSRP1	ENST00000247026.9	2541	7	35	1035	-3	247	multi-exon	FALSE	canonical	1	41435	junction_2	49776.427729119154	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1443	29	1471	70.0	-13	True	AAGAAA	-33
PB.4875.2	chr17	+	2628	8	novel_in_catalog	NSRP1	novel	2057	7	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	67398.24145104883	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	322	1836	25.0	-21	True	AATAAA	-13
PB.4875.1	chr17	+	2439	6	full-splice_match	NSRP1	ENST00000612959.4	2420	6	-20	1	6	-1	multi-exon	FALSE	canonical	1	32961	junction_1	41670.71026032553	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	126	1640	30.0	-3	True	AATAAA	-20
PB.7739.4	chr22	-	1985	3	full-splice_match	APOL3	ENST00000349314.6	2117	3	131	1	-15	-1	multi-exon	FALSE	canonical	1	28117	junction_2	113217.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	508	1116	25.0	11	True	NA	NA
PB.1558.2	chr10	+	3967	6	full-splice_match	CCNJ	ENST00000403870.7	2830	6	141	-1278	-48	-4	multi-exon	FALSE	canonical	1	16792	junction_3	25318.18121113758	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	227	1342	25.0	-48	True	AATAAA	-14
PB.1558.3	chr10	+	3781	5	novel_in_catalog	CCNJ	novel	2830	6	NA	NA	-37	-4	no_combination_of_known_junctions	FALSE	canonical	1	8655	junction_2	31172.16025057455	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	392	1156	25.0	-37	True	AATAAA	-14
PB.1558.1	chr10	+	3907	6	full-splice_match	CCNJ	ENST00000465148.2	2677	6	-68	-1162	-68	-120	multi-exon	FALSE	canonical	1	16792	junction_3	26569.651969116945	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	247	1398	35.0	-836	False	AATAAA	-27
PB.1558.4	chr10	+	3978	6	full-splice_match	CCNJ	ENST00000465148.2	2677	6	-23	-1278	-23	-4	multi-exon	FALSE	canonical	1	16792	junction_3	26569.651969116945	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	202	1353	25.0	-23	True	AATAAA	-14
PB.1558.5	chr10	+	3649	5	novel_in_catalog	CCNJ	novel	2830	6	NA	NA	-21	-120	no_combination_of_known_junctions	FALSE	canonical	1	8655	junction_2	31172.16025057455	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	376	1140	35.0	-21	True	AATAAA	-27
PB.11879.3	chr9	+	2280	4	novel_in_catalog	RPL7A	novel	891	8	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	4506	junction_1	6271708.64859842	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	CATAAA	-30
PB.8754.1	chr4	+	5028	26	full-splice_match	LIMCH1	ENST00000508501.5	5054	26	-14	40	-14	-28	multi-exon	FALSE	canonical	1	114712	junction_1	85116.9309168135	NA	0	NA	TRUE	NA	NA	NA	A	coding	1056	3171	71	3241	90.0	3	True	NA	NA
PB.5450.19	chr18	-	1697	1	genic	RPRD1A	novel	NA	NA	NA	NA	-8	-13013	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	107	324	181	504	70.0	-28	False	NA	NA
PB.5450.18	chr18	-	2089	5	novel_in_catalog	RPRD1A	novel	1945	9	NA	NA	-3	0	intron_retention	FALSE	canonical	1	22620	junction_4	238606.8685949495	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	23	True	AATAAA	-13
PB.5450.17	chr18	-	2120	6	incomplete-splice_match	RPRD1A	ENST00000357384.8	1850	8	122	35713	96	0	3prime_fragment	FALSE	canonical	1	457933	junction_5	61545.264127794595	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	31	843	20.0	-1	True	AATAAA	-13
PB.5450.16	chr18	-	2310	7	incomplete-splice_match	RPRD1A	ENST00000588737.5	1264	8	0	32553	0	6	3prime_fragment	FALSE	canonical	1	41261	junction_6	236456.18220836512	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	323	1027	15.0	-3	True	AATAAA	-19
PB.5450.15	chr18	-	3286	6	incomplete-splice_match	RPRD1A	ENST00000357384.8	1850	8	2	34667	2	336	3prime_fragment	FALSE	canonical	1	457933	junction_5	61545.264127794595	NA	3	NA	TRUE	NA	NA	NA	C	coding	270	813	151	963	50.0	2	True	ATTAAA	-17
PB.5450.14	chr18	-	3503	6	incomplete-splice_match	RPRD1A	ENST00000357384.8	1850	8	2	34450	2	553	3prime_fragment	FALSE	canonical	1	457933	junction_5	61545.264127794595	NA	2	NA	TRUE	NA	NA	NA	C	coding	270	813	151	963	95.0	2	True	NA	NA
PB.5450.13	chr18	-	2327	8	full-splice_match	RPRD1A	ENST00000588737.5	1264	8	124	-1187	95	1187	multi-exon	FALSE	canonical	1	41261	junction_7	223848.2283681312	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	199	1029	30.0	-2	True	AATAAA	-19
PB.5450.12	chr18	-	2385	7	full-splice_match	RPRD1A	ENST00000399022.8	4438	7	26	2027	6	1189	multi-exon	FALSE	canonical	1	457933	junction_6	56402.309169631226	NA	5	NA	TRUE	NA	NA	NA	C	coding	312	939	147	1085	20.0	6	True	AATAAA	-21
PB.5450.11	chr18	-	4052	7	full-splice_match	RPRD1A	ENST00000399022.8	4438	7	30	356	10	-294	multi-exon	FALSE	canonical	1	457933	junction_6	56402.309169631226	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	143	1081	55.0	10	True	NA	NA
PB.5450.10	chr18	-	1902	8	full-splice_match	RPRD1A	ENST00000357384.8	1850	8	2	-54	2	-8	multi-exon	FALSE	canonical	1	15947	junction_1	185119.17172525622	NA	6	NA	TRUE	NA	NA	NA	C	coding	312	939	151	1089	20.0	2	True	AATAAA	-17
PB.5017.1	chr17	-	2964	1	novel_in_catalog	CCDC200	novel	649	4	NA	NA	18927	-56923	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.3093.3	chr13	-	3591	18	full-splice_match	HSPH1	ENST00000320027.9	5191	18	20	1580	20	-1	multi-exon	FALSE	canonical	1	711764	junction_17	341484.71811072686	NA	68	5	TRUE	NA	NA	NA	C	coding	858	2577	326	2902	25.0	-5	True	AATAAA	-23
PB.8003.4	chr3	+	2216	13	novel_in_catalog	FBXL2	novel	558	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	387	junction_2	35532.659239619104	NA	2	1	TRUE	NA	NA	NA	C	coding	133	402	798	1199	60.0	11	True	AATAAA	-16
PB.1056.3	chr1	-	7673	33	novel_in_catalog	PIK3C2B	novel	7686	34	NA	NA	-103	-10	intron_retention	FALSE	canonical	1	66906	junction_32	30550.548311300303	NA	2	NA	TRUE	NA	NA	NA	B	coding	1634	4905	557	5461	65.0	-23	True	AATAAA	-12
PB.6859.1	chr2	+	1951	1	novel_in_catalog	MTX2	novel	1592	11	NA	NA	8	-56945	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	125	378	204	581	50.0	-15	True	NA	NA
PB.1056.4	chr1	-	7569	34	novel_not_in_catalog	PIK3C2B	novel	7686	34	NA	NA	-80	-10	any annotated donor/acceptor	FALSE	canonical	1	8379	junction_18	36270.89257948303	NA	2	NA	TRUE	NA	NA	NA	B	coding	1607	4824	534	5357	65.0	0	True	AATAAA	-12
PB.11357.18	chr8	-	4181	30	novel_in_catalog	PTK2	novel	4955	32	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	92123	junction_29	123747.43108977043	NA	3	NA	TRUE	NA	NA	NA	C	coding	939	2820	301	3120	30.0	8	True	ATTAAA	-15
PB.7584.3	chr22	+	2598	8	intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	coding	103	312	1486	1797	45.0	NA	False	AATAAA	-9
PB.7584.2	chr22	+	5288	1	intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	AATGAA	-5
PB.465.37	chr1	-	3012	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	-1	3665	-1	-437	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	117	1280	35.0	1	True	AATATA	-16
PB.4869.1	chr17	+	6542	1	incomplete-splice_match	TAOK1	ENST00000261716.7	12407	20	153863	900	22175	-900	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	15	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-2902	False	AAAAAG	-31
PB.4869.2	chr17	+	3107	1	incomplete-splice_match	TAOK1	ENST00000261716.7	12407	20	157298	900	25610	-900	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	533	False	AAAAAG	-31
PB.4869.3	chr17	+	3064	1	incomplete-splice_match	TAOK1	ENST00000261716.7	12407	20	158239	2	26551	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	1474	False	AATAAA	-16
PB.4598.9	chr16	-	4428	9	novel_in_catalog	SLC7A5	novel	3983	10	NA	NA	-18	-1	no_combination_of_known_junctions	FALSE	canonical	1	9110	junction_8	840546.9000945066	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	85	1482	10.0	-2	True	AAGAAA	-15
PB.4869.5	chr17	+	2540	1	incomplete-splice_match	TAOK1	ENST00000261716.7	12407	20	158763	2	27075	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	1998	False	AATAAA	-16
PB.7192.2	chr20	-	2919	6	novel_not_in_catalog	RBBP9	novel	3861	5	NA	NA	-10	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67230.04847060576	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	87	647	40.0	1	True	ATTAAA	-14
PB.4598.4	chr16	-	4206	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	2931	1	any annotated donor/acceptor	FALSE	canonical	1	21651	junction_9	791205.2960458415	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	254	1258	5.0	-1	True	AAGAAA	-17
PB.4598.7	chr16	-	4510	11	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-17	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	772052.1775295049	NA	3	NA	TRUE	NA	NA	NA	C	coding	388	1167	398	1564	10.0	-1	True	AAGAAA	-15
PB.7192.1	chr20	-	3847	5	full-splice_match	RBBP9	ENST00000337227.8	3861	5	9	5	9	-5	multi-exon	FALSE	canonical	1	115887	junction_3	36333.487861578884	NA	3	NA	TRUE	NA	NA	NA	C	coding	186	561	68	628	35.0	-10	True	ATTAAA	-15
PB.7192.6	chr20	-	3076	5	full-splice_match	RBBP9	ENST00000337227.8	3861	5	5	780	5	-780	multi-exon	FALSE	canonical	1	115887	junction_3	36333.487861578884	NA	3	NA	TRUE	NA	NA	NA	C	coding	186	561	72	632	35.0	-14	True	AATATA	-11
PB.7192.7	chr20	-	3048	4	full-splice_match	RBBP9	ENST00000491835.1	830	4	-79	-2139	-10	-780	multi-exon	FALSE	canonical	1	17802	junction_3	78736.12050528158	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	218	604	35.0	1	True	AATATA	-11
PB.4598.3	chr16	-	4556	10	full-splice_match	SLC7A5	ENST00000261622.4	4537	10	-20	1	-20	-1	multi-exon	FALSE	canonical	1	1488895	junction_9	437047.0731744981	NA	226	4	TRUE	NA	NA	NA	C	coding	507	1524	87	1610	10.0	-4	True	AAGAAA	-15
PB.4598.2	chr16	-	4733	11	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-17	2	any annotated donor/acceptor	FALSE	canonical	1	6288	junction_9	959187.9718866162	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	84	1784	5.0	-1	True	AAGAAA	-18
PB.3134.2	chr13	+	9877	12	novel_in_catalog	AKAP11	novel	9920	13	NA	NA	-42	-1	no_combination_of_known_junctions	FALSE	canonical	1	67642	junction_1	75396.45530293803	NA	8	NA	TRUE	NA	NA	NA	B	coding	1873	5622	218	5839	20.0	-547	False	AATAAA	-17
PB.3134.3	chr13	+	4428	7	novel_in_catalog	AKAP11	novel	9920	13	NA	NA	-37	-20255	no_combination_of_known_junctions	FALSE	canonical	1	16267	junction_1	62955.101910673875	NA	0	NA	TRUE	NA	NA	NA	B	coding	1422	4266	163	4428	70.0	-542	False	NA	NA
PB.3134.1	chr13	+	1937	7	novel_not_in_catalog	AKAP11	novel	9920	13	NA	NA	-673	-22918	any annotated donor/acceptor	FALSE	canonical	1	10823	junction_1	64593.636679414645	NA	0	NA	TRUE	NA	NA	NA	B	coding	534	1602	335	1936	75.0	-33	True	AATAAA	-32
PB.3134.6	chr13	+	1756	7	novel_in_catalog	AKAP11	novel	9920	13	NA	NA	-28	-22918	no_combination_of_known_junctions	FALSE	canonical	1	16267	junction_1	62955.101910673875	NA	0	NA	TRUE	NA	NA	NA	B	coding	534	1602	154	1755	75.0	-533	False	AATAAA	-32
PB.3134.7	chr13	+	2669	8	incomplete-splice_match	AKAP11	ENST00000025301.3	9920	13	-26	22053	-26	-22053	3prime_fragment	FALSE	canonical	1	67642	junction_1	45931.03531449323	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2466	202	2667	75.0	-531	False	NA	NA
PB.3134.4	chr13	+	1812	8	incomplete-splice_match	AKAP11	ENST00000025301.3	9920	13	-34	22918	-34	-22918	3prime_fragment	FALSE	canonical	1	67642	junction_1	45931.03531449323	NA	0	NA	TRUE	NA	NA	NA	B	coding	534	1602	210	1811	75.0	-539	False	AATAAA	-32
PB.3134.5	chr13	+	4471	8	incomplete-splice_match	AKAP11	ENST00000025301.3	9920	13	-30	20255	-30	-20255	3prime_fragment	FALSE	canonical	1	67642	junction_1	45931.03531449323	NA	0	NA	TRUE	NA	NA	NA	B	coding	1422	4266	206	4471	70.0	-535	False	NA	NA
PB.8881.7	chr4	-	5105	22	novel_in_catalog	FAM13A	novel	4945	17	NA	NA	0	-523	intron_retention	FALSE	canonical	1	6247	junction_16	52485.99973317579	NA	1	NA	TRUE	NA	NA	NA	C	coding	800	2403	648	3050	20.0	8	True	AATAAA	-13
PB.3134.8	chr13	+	5881	12	novel_in_catalog	AKAP11	novel	9920	13	NA	NA	-14	-3969	no_combination_of_known_junctions	FALSE	canonical	1	67642	junction_1	75396.45530293803	NA	2	NA	TRUE	NA	NA	NA	B	coding	1873	5622	190	5811	50.0	-18	True	AATAAA	-12
PB.3134.9	chr13	+	1593	7	novel_in_catalog	AKAP11	novel	9920	13	NA	NA	50	-22918	no_combination_of_known_junctions	FALSE	canonical	1	14061	junction_5	67100.13235559888	NA	0	NA	TRUE	NA	NA	NA	B	coding	489	1467	126	1592	75.0	-455	False	AATAAA	-32
PB.8881.3	chr4	-	4969	17	full-splice_match	FAM13A	ENST00000503556.5	3386	17	-506	-1077	-376	-394	multi-exon	FALSE	canonical	1	14637	junction_16	46120.938435676915	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	734	2785	10.0	2573	False	AATAAA	-40
PB.2285.1	chr11	+	2288	22	full-splice_match	TTC12	ENST00000529221.5	2315	22	22	5	22	0	multi-exon	FALSE	canonical	1	28283	junction_1	18180.25524331323	NA	0	NA	TRUE	NA	NA	NA	A	coding	705	2118	84	2201	35.0	0	True	AATAAA	-18
PB.6362.5	chr2	+	1995	16	full-splice_match	HADHB	ENST00000317799.9	2044	16	45	4	14	0	multi-exon	FALSE	canonical	1	205276	junction_1	411991.3117748102	NA	14	NA	TRUE	NA	NA	NA	C	coding	474	1425	60	1484	25.0	1	True	AATAAA	-16
PB.8021.9	chr3	+	1988	19	full-splice_match	XYLB	ENST00000207870.7	3664	19	21	1655	2	32	multi-exon	FALSE	canonical	1	45785	junction_2	11620.457190305739	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	70	1680	50.0	-8	True	AATAAA	-22
PB.10039.5	chr6	+	2809	13	novel_in_catalog	LRRC1	novel	2527	11	NA	NA	26	-266	no_combination_of_known_junctions	FALSE	canonical	1	6478	junction_2	49493.00395756006	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	252	563	45.0	1	True	AATAAA	-16
PB.10039.4	chr6	+	2919	14	full-splice_match	LRRC1	ENST00000370888.5	3180	14	-1	262	-1	-262	multi-exon	FALSE	canonical	1	78637	junction_1	37210.04348624872	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	279	1853	40.0	-26	True	AATAAA	-20
PB.10039.1	chr6	+	3068	14	novel_not_in_catalog	LRRC1	novel	2527	11	NA	NA	-23	1596	any annotated donor/acceptor	TRUE	canonical	1	7002	junction_13	44388.68841636846	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	301	2112	15.0	-48	True	AATAAA	-13
PB.10039.3	chr6	+	2780	14	full-splice_match	LRRC1	ENST00000370888.5	3180	14	-6	406	-6	-406	multi-exon	FALSE	canonical	1	78637	junction_1	37210.04348624872	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	284	1858	75.0	-31	True	AATAAA	-10
PB.10039.2	chr6	+	3206	14	full-splice_match	LRRC1	ENST00000370888.5	3180	14	-21	-5	-21	5	multi-exon	FALSE	canonical	1	78637	junction_1	37210.04348624872	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	299	1873	35.0	-46	True	AATAAA	-24
PB.465.35	chr1	-	3207	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	-3	-1101	-3	-246	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	103	1284	40.0	-1	True	TATAAA	-45
PB.2238.14	chr11	-	3552	18	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	6624	junction_14	149295.86881383858	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	636	2351	15.0	0	True	ATTAAA	-27
PB.2238.15	chr11	-	3286	17	full-splice_match	MTMR2	ENST00000409459.5	3420	17	123	11	-105	-10	multi-exon	FALSE	canonical	1	56216	junction_13	134962.82741578328	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	380	2095	15.0	56	True	ATTAAA	-17
PB.2238.16	chr11	-	3358	16	full-splice_match	MTMR2	ENST00000352297.11	3350	16	-8	0	-1	0	multi-exon	FALSE	canonical	1	112648	junction_15	107291.31383597132	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	442	2157	15.0	-2	True	ATTAAA	-27
PB.2238.17	chr11	-	3363	17	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	7266	junction_16	146163.0420698385	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	447	2162	15.0	1	True	ATTAAA	-27
PB.2238.10	chr11	-	3404	17	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	66	0	no_combination_of_known_junctions	FALSE	canonical	1	28052	junction_14	140559.83874513584	NA	2	NA	TRUE	NA	NA	NA	C	coding	571	1716	487	2202	20.0	-1	True	ATTAAA	-28
PB.2238.11	chr11	-	3474	18	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	21	0	no_combination_of_known_junctions	FALSE	canonical	1	6624	junction_14	158213.07248919285	NA	2	NA	TRUE	NA	NA	NA	C	coding	571	1716	557	2272	20.0	625	False	ATTAAA	-28
PB.2238.12	chr11	-	3333	16	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	18	0	no_combination_of_known_junctions	FALSE	canonical	1	7486	junction_15	149429.14517271685	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	416	2131	20.0	622	False	ATTAAA	-28
PB.2238.13	chr11	-	3230	15	novel_not_in_catalog	MTMR2	novel	4681	15	NA	NA	2292	0	any annotated donor/acceptor	FALSE	canonical	1	2424	junction_14	116322.2162921703	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	313	2028	20.0	-1	True	ATTAAA	-28
PB.10025.6	chr6	-	2777	13	novel_not_in_catalog	MUT	novel	3749	13	NA	NA	-101	-1008	any annotated donor/acceptor	FALSE	canonical	1	34178	junction_12	91533.44471042023	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	165	2417	20.0	11	True	ATTAAA	-21
PB.10025.4	chr6	-	3275	13	full-splice_match	MUT	ENST00000274813.3	3749	13	-60	534	-60	-534	multi-exon	FALSE	canonical	1	162846	junction_12	65091.93193732487	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	189	2441	70.0	1	True	CATAAA	-5
PB.10025.5	chr6	-	2763	13	full-splice_match	MUT	ENST00000274813.3	3749	13	-33	1019	-33	-1019	multi-exon	FALSE	canonical	1	162846	junction_12	65091.93193732487	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	162	2414	40.0	28	True	ATTAAA	-10
PB.2238.18	chr11	-	3571	16	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	1898	junction_12	158313.52909787028	NA	12	2	TRUE	NA	NA	NA	C	coding	527	1584	788	2371	15.0	-3	True	ATTAAA	-26
PB.2238.19	chr11	-	3283	16	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	1	7266	junction_15	123430.10492769671	NA	14	3	TRUE	NA	NA	NA	C	coding	571	1716	368	2083	15.0	618	False	ATTAAA	-26
PB.10025.1	chr6	-	3764	13	novel_not_in_catalog	MUT	novel	3749	13	NA	NA	-74	6	any annotated donor/acceptor	FALSE	canonical	1	34178	junction_12	91533.44471042023	NA	2	NA	TRUE	NA	NA	NA	C	coding	750	2253	138	2390	25.0	-13	True	AATAAA	-26
PB.11314.1	chr8	-	2246	9	full-splice_match	DSCC1	ENST00000313655.4	2314	9	96	-28	-56	28	multi-exon	FALSE	canonical	1	136623	junction_5	40757.86216179647	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	120	1301	25.0	-57	True	AATAAA	-43
PB.8322.5	chr3	+	1712	11	novel_in_catalog	PLA1A	novel	1786	11	NA	NA	-27	2	combination_of_known_junctions	FALSE	canonical	1	1494	junction_1	39302.82124491828	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	516	1367	30.0	673	False	AATAAA	-22
PB.8435.10	chr3	+	4034	4	full-splice_match	ZBTB38	ENST00000507722.5	593	4	-102	-3339	-102	83	multi-exon	FALSE	canonical	1	17194	junction_1	75182.85090069115	NA	4	NA	TRUE	NA	NA	NA	C	coding	1195	3588	340	3927	75.0	-4761	False	NA	NA
PB.3015.10	chr12	-	1773	9	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	20	131	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	137156.3822101778	NA	1	NA	TRUE	NA	NA	NA	B	coding	318	957	385	1341	35.0	-6	True	AATAAA	-15
PB.1191.6	chr1	+	2910	18	full-splice_match	COG2	ENST00000366669.8	2921	18	10	1	-3	0	multi-exon	FALSE	canonical	1	186298	junction_14	36669.692308310405	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	106	2322	10.0	-3	True	AATAAA	-14
PB.7213.31	chr20	+	1876	4	incomplete-splice_match	PYGB	ENST00000428458.1	734	6	2734	-1543	-1319	-3	5prime_fragment	FALSE	canonical	1	865829	junction_1	183260.5179743368	NA	1	NA	TRUE	NA	NA	NA	C	coding	79	240	148	387	15.0	NA	False	ATTAAA	-23
PB.9202.1	chr5	+	4723	10	full-splice_match	GHR	ENST00000620156.4	4529	10	-249	55	-249	-54	multi-exon	FALSE	canonical	1	1294	junction_1	31412.942042696	NA	5	NA	TRUE	NA	NA	NA	C	coding	645	1938	387	2324	15.0	-778	False	AATAAA	-14
PB.702.10	chr1	-	1889	7	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-50	-29956	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	137.51818061623706	NA	3	1	TRUE	NA	NA	NA	B	coding	157	474	795	1268	10.0	NA	False	AATACA	-32
PB.1191.4	chr1	+	2677	18	full-splice_match	COG2	ENST00000366669.8	2921	18	-5	249	-2	108	multi-exon	FALSE	canonical	1	186298	junction_14	36669.692308310405	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	121	2337	30.0	-18	True	ATTAAA	-18
PB.7502.2	chr21	-	2509	10	full-splice_match	DONSON	ENST00000303071.9	2170	10	22	-361	-16	-8	multi-exon	FALSE	canonical	1	88776	junction_9	61995.521139498655	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	46	1746	50.0	-11	True	AATAAA	-26
PB.1191.2	chr1	+	4143	16	novel_in_catalog	COG2	novel	7836	10	NA	NA	-6	0	intron_retention	FALSE	canonical	1	201083	junction_9	36363.82407588924	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	125	1999	10.0	-22	True	AATAAA	-14
PB.9762.4	chr6	+	1766	13	full-splice_match	CAP2	ENST00000229922.6	3316	13	453	1097	6	36	multi-exon	FALSE	canonical	1	249909	junction_1	39104.65461949156	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	80	1513	65.0	-43	True	TTTAAA	-3
PB.9762.3	chr6	+	2664	11	full-splice_match	CAP2	ENST00000465994.5	1404	11	-50	-1210	-1	-12	multi-exon	FALSE	canonical	1	9507	junction_5	99037.53181501444	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	87	1328	30.0	-50	True	AATAAA	-20
PB.9762.2	chr6	+	1585	13	full-splice_match	CAP2	ENST00000229922.6	3316	13	424	1307	-5	-79	multi-exon	FALSE	canonical	1	249909	junction_1	39104.65461949156	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	109	1542	70.0	-72	False	NA	NA
PB.9762.1	chr6	+	2839	13	full-splice_match	CAP2	ENST00000229922.6	3316	13	472	5	-24	-3	multi-exon	FALSE	canonical	1	249909	junction_1	39104.65461949156	NA	2	NA	TRUE	NA	NA	NA	C	coding	477	1434	61	1494	40.0	-24	True	AATAAA	-29
PB.796.1	chr1	-	2662	9	novel_not_in_catalog	GBAP1	novel	2922	8	NA	NA	-20	62	intron_retention	FALSE	canonical	1	5221	junction_8	36119.69272000386	NA	1	NA	TRUE	NA	NA	NA	B	coding	269	810	1128	1937	30.0	-8	True	ATTAAA	-17
PB.4446.6	chr16	-	1874	8	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	0	211	intron_retention	FALSE	non_canonical	0	0	junction_3	141800.4907410696	NA	1	NA	TRUE	NA	NA	NA	B	coding	254	765	345	1109	35.0	7	True	AATAAA	-31
PB.8123.9	chr3	-	3906	22	novel_in_catalog	UBA7	novel	3299	24	NA	NA	-19	-7	intron_retention	FALSE	canonical	1	217725	junction_11	92415.31267553066	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	1914	3812	35.0	-20	True	NA	NA
PB.7634.1	chr22	-	2326	5	full-splice_match	SLC7A4	ENST00000382932.2	2313	5	-10	-3	-10	3	multi-exon	FALSE	canonical	1	3951	junction_4	9397.504376162855	NA	0	NA	TRUE	NA	NA	NA	A	coding	635	1908	79	1986	10.0	-8	True	NA	NA
PB.5454.19	chr18	+	4848	24	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	16200	junction_10	29201.69936648138	NA	39	2	TRUE	NA	NA	NA	C	coding	1401	4206	118	4323	40.0	6	True	AATAAA	-15
PB.5454.18	chr18	+	4785	23	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	7196	junction_2	34560.96725897632	NA	1	NA	TRUE	NA	NA	NA	C	coding	1220	3663	598	4260	40.0	4	True	AATAAA	-15
PB.10484.9	chr7	+	2410	14	novel_in_catalog	SEPT7	novel	509	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	22545	junction_3	353847.1401331906	NA	2	1	TRUE	NA	NA	NA	C	coding	407	1224	174	1397	30.0	-3	True	AATAAA	-16
PB.10484.8	chr7	+	4551	4	incomplete-splice_match	SEPT7	ENST00000634600.1	583	6	0	2953	0	2839	intron_retention	FALSE	canonical	1	3631	junction_1	794580.6386391643	NA	2	1	TRUE	NA	NA	NA	C	coding	73	222	143	364	85.0	-3	True	NA	NA
PB.2486.8	chr12	-	2745	13	novel_not_in_catalog	WBP11	novel	4646	12	NA	NA	4	-1901	any annotated donor/acceptor	FALSE	canonical	1	451	junction_12	243111.81763433924	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	235	2160	30.0	5	True	AATAAA	-16
PB.2486.7	chr12	-	3295	11	novel_in_catalog	WBP11	novel	4646	12	NA	NA	0	-1901	intron_retention	FALSE	canonical	1	279116	junction_7	145578.7928271491	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	1484	2710	30.0	1	True	AATAAA	-16
PB.5454.12	chr18	+	4852	23	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	7196	junction_2	34685.681295661685	NA	0	NA	TRUE	NA	NA	NA	C	coding	1241	3726	602	4327	40.0	0	True	AATAAA	-15
PB.2486.5	chr12	-	2653	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	46	1947	-8	-1947	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	189	2114	25.0	-17	True	ATTAAA	-18
PB.2486.4	chr12	-	3175	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	34	1437	-20	-1437	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	201	2126	30.0	-29	True	ATTAAA	-42
PB.2486.3	chr12	-	3626	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	51	969	-3	-969	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	184	2109	25.0	-12	True	ATTAAA	-21
PB.2486.2	chr12	-	4606	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	36	4	-18	-4	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	199	2124	25.0	-27	True	ATTAAA	-17
PB.2486.1	chr12	-	5575	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	55	-984	1	984	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	180	2105	45.0	-8	True	AATAAA	-13
PB.3945.1	chr15	+	2343	21	full-splice_match	MAP2K5	ENST00000395476.6	1689	21	-658	4	-36	0	multi-exon	FALSE	canonical	1	20311	junction_16	46236.1113826628	NA	2	NA	TRUE	NA	NA	NA	C	coding	427	1284	697	1980	25.0	-42	True	AATAAA	-20
PB.11287.1	chr8	-	3662	3	novel_in_catalog	BAALC-AS1	novel	1353	6	NA	NA	-23	2243	combination_of_known_junctions	FALSE	canonical	1	5088	junction_2	1632.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-70	False	AATAAA	-24
PB.9202.3	chr5	+	4885	10	novel_not_in_catalog	GHR	novel	4560	10	NA	NA	43921	-54	any annotated donor/acceptor	FALSE	canonical	1	606	junction_1	31557.774378564707	NA	3	NA	TRUE	NA	NA	NA	C	coding	638	1917	570	2486	15.0	NA	False	AATAAA	-14
PB.9115.3	chr5	+	5690	11	novel_in_catalog	PDCD6	novel	458	5	NA	NA	13514	84455	no_combination_of_known_junctions	FALSE	canonical	1	43291	junction_1	17515.319731309504	NA	2	NA	TRUE	NA	NA	NA	C	coding	697	2094	120	2213	30.0	-33	True	TTTAAA	-21
PB.9115.2	chr5	+	4575	11	novel_in_catalog	PDCD6	novel	458	5	NA	NA	13503	83329	no_combination_of_known_junctions	FALSE	canonical	1	43291	junction_1	17515.319731309504	NA	1	NA	TRUE	NA	NA	NA	C	coding	697	2094	131	2224	70.0	-44	True	NA	NA
PB.6812.16	chr2	-	3002	14	incomplete-splice_match	IFIH1	ENST00000649979.1	3544	16	-10	1168	-10	-999	3prime_fragment	FALSE	canonical	1	173522	junction_6	45666.82256487304	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2646	356	3001	70.0	20	True	NA	NA
PB.11244.20	chr8	+	2777	25	incomplete-splice_match	INTS8	ENST00000523731.5	4633	27	3961	1421	-1732	-2	5prime_fragment	FALSE	canonical	1	232705	junction_5	124457.87984957418	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	26	2686	15.0	3929	False	AATAAA	-41
PB.6812.17	chr2	-	3707	12	novel_not_in_catalog	IFIH1	novel	3544	16	NA	NA	19	-8277	any annotated donor/acceptor	FALSE	canonical	1	2602	junction_1	85664.12598511345	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	327	2696	15.0	49	True	NA	NA
PB.522.3	chr1	-	2786	10	novel_in_catalog	GBP3	novel	3067	11	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	4650	junction_5	69628.04461007233	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	206	1750	55.0	-13	True	NA	NA
PB.522.2	chr1	-	3030	11	full-splice_match	GBP3	ENST00000370481.8	3067	11	15	22	-1	-8	multi-exon	FALSE	canonical	1	111670	junction_9	44974.44425459864	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	207	1994	55.0	-14	True	NA	NA
PB.522.1	chr1	-	3115	12	full-splice_match	GBP3	ENST00000493594.6	2561	12	28	-582	0	-8	multi-exon	FALSE	canonical	1	17182	junction_9	69901.78037447015	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	529	2079	55.0	-13	True	NA	NA
PB.11734.7	chr9	+	4603	6	novel_not_in_catalog	SLC31A1	novel	4744	5	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	94603.33954570525	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	162	734	20.0	-35	True	AATAAA	-22
PB.522.6	chr1	-	1877	10	incomplete-splice_match	GBP3	ENST00000370481.8	3067	11	14	2270	-2	-1	3prime_fragment	FALSE	canonical	1	111670	junction_8	45322.247624955424	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1668	208	1875	10.0	-15	True	AGTAAA	-18
PB.522.5	chr1	-	2842	11	novel_not_in_catalog	GBP3	novel	3067	11	NA	NA	-6	-120	any annotated donor/acceptor	FALSE	canonical	1	10471	junction_4	66166.95657471333	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	212	1918	35.0	-19	True	AATAAA	-14
PB.522.4	chr1	-	2927	11	full-splice_match	GBP3	ENST00000370481.8	3067	11	16	124	0	-110	multi-exon	FALSE	canonical	1	111670	junction_9	44974.44425459864	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	206	1993	30.0	-13	True	AATAAA	-24
PB.9649.2	chr5	-	1759	13	novel_in_catalog	PDLIM7	novel	1686	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	12658	junction_9	344642.09708728595	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	88	1512	0.0	-3	True	AATAAA	-14
PB.9649.1	chr5	-	1712	13	full-splice_match	PDLIM7	ENST00000355841.6	1689	13	-21	-2	2	0	multi-exon	FALSE	canonical	1	718919	junction_9	197709.1232699885	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	89	1462	0.0	-4	True	AATAAA	-17
PB.11734.8	chr9	+	1789	5	full-splice_match	SLC31A1	ENST00000374212.4	4744	5	9	2946	9	-2946	multi-exon	FALSE	canonical	1	119935	junction_4	61334.579604412385	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	144	716	15.0	-17	True	AATAAA	-14
PB.11517.1	chr9	-	2362	15	novel_in_catalog	FANCG	novel	2108	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	23821	junction_14	89678.35577490143	NA	3	2	TRUE	NA	NA	NA	B	coding	622	1869	224	2092	20.0	-2	True	AGTAAA	-14
PB.9115.6	chr5	+	3474	10	novel_in_catalog	PDCD6	novel	458	5	NA	NA	14352	81252	intron_retention	FALSE	canonical	1	2221	junction_1	27121.858589214226	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	1818	3200	20.0	-87	False	ATTAAA	-15
PB.8448.3	chr3	+	3166	12	full-splice_match	U2SURP	ENST00000461591.5	1580	12	-18	-1568	-18	1568	multi-exon	FALSE	canonical	1	346998	junction_9	140409.89555730473	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	38	1276	25.0	-10	True	ATTAAA	-14
PB.9754.1	chr6	+	3301	3	full-splice_match	RNF182	ENST00000488300.5	3706	3	105	300	17	-6	multi-exon	FALSE	canonical	1	11020	junction_1	27150.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	247	744	419	1162	35.0	12	True	ATTAAA	-15
PB.9754.2	chr6	+	3443	4	novel_not_in_catalog	RNF182	novel	646	3	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	106	junction_1	30578.2940044441	NA	2	NA	TRUE	NA	NA	NA	C	coding	247	744	559	1302	25.0	-5	True	ATTAAA	-17
PB.9754.3	chr6	+	3610	3	full-splice_match	RNF182	ENST00000488300.5	3706	3	97	-1	9	1	multi-exon	FALSE	canonical	1	11020	junction_1	27150.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	427	1170	35.0	4	True	AATAAA	-15
PB.9754.4	chr6	+	3146	2	full-splice_match	RNF182	ENST00000420478.2	826	2	76	-2396	17	-6	multi-exon	FALSE	canonical	1	3796	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	264	1007	35.0	12	True	ATTAAA	-15
PB.9754.5	chr6	+	3391	2	full-splice_match	RNF182	ENST00000537388.1	3274	2	-123	6	115	-6	multi-exon	FALSE	canonical	1	8955	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	509	1252	35.0	-35	False	ATTAAA	-15
PB.9754.6	chr6	+	3518	3	novel_in_catalog	RNF182	novel	646	3	NA	NA	-90	-1	no_combination_of_known_junctions	FALSE	canonical	1	21227	junction_1	22047.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	247	744	631	1374	25.0	-2	True	ATTAAA	-20
PB.8448.4	chr3	+	3342	27	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-24	-10	combination_of_known_junctions	FALSE	canonical	1	98355	junction_26	197146.44246941071	NA	1	1	TRUE	NA	NA	NA	C	coding	970	2913	44	2956	35.0	-16	True	AATAAA	-11
PB.5311.5	chr17	+	1578	9	novel_in_catalog	BAIAP2	novel	1939	14	NA	NA	-27	-18	combination_of_known_junctions	FALSE	canonical	1	14555	junction_1	194934.6781324692	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	386	1222	70.0	-9250	False	NA	NA
PB.5311.4	chr17	+	2043	14	full-splice_match	BAIAP2	ENST00000321280.11	1939	14	29	-133	0	-1	multi-exon	FALSE	canonical	1	136411	junction_13	121039.69860456538	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	105	1670	95.0	0	True	NA	NA
PB.8448.9	chr3	+	4142	27	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	98355	junction_26	195801.2591814539	NA	1	NA	TRUE	NA	NA	NA	C	coding	969	2910	31	2940	25.0	-3	True	AATAAA	-24
PB.5311.6	chr17	+	1995	8	novel_in_catalog	BAIAP2	novel	1939	14	NA	NA	32	0	intron_retention	FALSE	canonical	1	14555	junction_1	187917.9430932772	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	327	1136	100.0	0	True	NA	NA
PB.5311.1	chr17	+	2097	14	full-splice_match	BAIAP2	ENST00000428708.6	2095	14	-1	-1	0	1	multi-exon	TRUE	canonical	1	150168	junction_13	118619.21752367528	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	106	1710	10.0	-1	True	AATAAA	-17
PB.412.1	chr1	-	3988	3	full-splice_match	COA7	ENST00000371538.4	4005	3	18	-1	18	1	multi-exon	FALSE	canonical	1	122628	junction_2	91614.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	23	718	25.0	-2	True	NA	NA
PB.5311.3	chr17	+	2503	13	full-splice_match	BAIAP2	ENST00000575712.5	2512	13	-5	14	0	1	multi-exon	FALSE	canonical	1	334663	junction_1	93657.61585898334	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	105	1643	100.0	0	True	NA	NA
PB.5311.2	chr17	+	2884	15	full-splice_match	BAIAP2	ENST00000321300.10	2879	15	-11	6	0	-6	multi-exon	FALSE	canonical	1	9450	junction_14	155341.60171278613	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	105	1763	55.0	0	True	AATAAA	-18
PB.11604.7	chr9	-	3021	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	-16	-220	-16	220	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	665	1306	60.0	-6	True	ATTAAA	-9
PB.11517.5	chr9	-	2572	14	novel_not_in_catalog	FANCG	novel	2108	13	NA	NA	19	-7	intron_retention	FALSE	canonical	1	24719	junction_2	91302.9937384182	NA	1	NA	TRUE	NA	NA	NA	B	coding	554	1665	474	2138	20.0	2	True	AGTAAA	-6
PB.9268.1	chr5	-	1187	3	full-splice_match	TAF9	ENST00000217893.9	1283	3	101	-5	-51	3	multi-exon	FALSE	canonical	1	422448	junction_1	161591.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	264	795	190	984	10.0	-22	True	AATAAA	-20
PB.7606.2	chr22	-	2017	13	novel_not_in_catalog	CLTCL1	novel	5313	32	NA	NA	5132	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	33965.35752169244	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	29	1504	15.0	-191	False	ATTAAA	-16
PB.9783.4	chr6	+	4134	2	full-splice_match	GMNN	ENST00000468943.1	679	2	7	-3462	7	-346	multi-exon	FALSE	canonical	1	289872	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	19	True	NA	NA
PB.7606.1	chr22	-	5531	33	full-splice_match	CLTCL1	ENST00000427926.5	5513	33	-22	4	-20	-1	multi-exon	FALSE	canonical	1	30	junction_11	21441.720756119328	NA	0	NA	TRUE	NA	NA	NA	C	coding	1640	4923	96	5018	15.0	-52	True	ATTAAA	-16
PB.412.6	chr1	-	1607	3	full-splice_match	COA7	ENST00000371538.4	4005	3	11	2387	11	724	multi-exon	FALSE	canonical	1	122628	junction_2	91614.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	30	725	20.0	-9	True	AATGAA	-17
PB.12197.1	chrX	+	1066	3	full-splice_match	TCEAL4	ENST00000472484.5	1273	3	-14	221	-6	-3	multi-exon	TRUE	canonical	1	1211502	junction_1	58072.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	227	874	45.0	-24	True	NA	NA
PB.1614.1	chr10	-	3413	11	full-splice_match	LDB1	ENST00000361198.9	2285	11	-56	-1072	-56	1072	multi-exon	FALSE	canonical	1	247290	junction_10	373518.7181879912	NA	2	NA	TRUE	NA	NA	NA	C	coding	375	1128	681	1808	10.0	-1	True	AATAAA	-19
PB.11604.3	chr9	-	5311	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	325	-2851	104	-182	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	324	965	85.0	6479	False	AATAAA	-18
PB.6589.2	chr2	-	4000	1	antisense	novelGene_AC093162.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	135	408	2147	2554	65.0	7444	False	NA	NA
PB.1612.3	chr10	-	4063	25	novel_in_catalog	ARMH3	novel	2464	3	NA	NA	-46	0	no_combination_of_known_junctions	FALSE	canonical	1	9017	junction_11	46687.19128025255	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	167	2134	5.0	6	True	ATTAAA	-23
PB.1612.2	chr10	-	4032	26	full-splice_match	ARMH3	ENST00000370033.8	4119	26	87	0	87	0	multi-exon	TRUE	canonical	1	117732	junction_25	32728.297662640507	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	34	2103	5.0	139	False	ATTAAA	-23
PB.1612.1	chr10	-	4238	27	novel_not_in_catalog	ARMH3	novel	2464	3	NA	NA	31	0	any annotated donor/acceptor	FALSE	canonical	1	1106	junction_19	55632.47306944466	NA	2	1	TRUE	NA	NA	NA	C	coding	739	2220	90	2309	5.0	10	True	ATTAAA	-23
PB.1612.7	chr10	-	3318	26	full-splice_match	ARMH3	ENST00000370033.8	4119	26	-23	824	-23	-824	multi-exon	FALSE	canonical	1	117732	junction_25	32728.297662640507	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	144	2213	15.0	29	False	AATAAA	-26
PB.1614.3	chr10	-	3035	10	novel_in_catalog	LDB1	novel	2285	11	NA	NA	-56	-11	intron_retention	FALSE	canonical	1	247290	junction_9	318980.6212237994	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	681	1631	60.0	-1	True	ATTAAA	-10
PB.1612.5	chr10	-	4748	26	novel_not_in_catalog	ARMH3	novel	2464	3	NA	NA	57	-7	any annotated donor/acceptor	FALSE	canonical	1	3225	junction_25	45658.66249909649	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	757	2826	10.0	36	True	ATTAAA	-16
PB.1612.4	chr10	-	2662	7	novel_not_in_catalog	ARMH3	novel	2464	3	NA	NA	28802	-6	any annotated donor/acceptor	FALSE	canonical	1	15	junction_6	85639.83155375515	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	191	739	10.0	1785	False	ATTAAA	-17
PB.6680.6	chr2	+	7930	20	incomplete-splice_match	RANBP2	ENST00000283195.10	11711	29	39	17429	-33	15285	3prime_fragment	FALSE	canonical	1	1248	junction_13	136517.4864180217	NA	0	NA	TRUE	NA	NA	NA	C	coding	2614	7842	88	7929	35.0	38	True	TTTAAA	-8
PB.6680.5	chr2	+	10660	29	full-splice_match	RANBP2	ENST00000283195.10	11711	29	26	1025	26	-1025	multi-exon	FALSE	canonical	1	1248	junction_13	248475.032865526	NA	11	NA	TRUE	NA	NA	NA	C	coding	3224	9675	101	9775	40.0	25	True	AATAAA	-12
PB.1612.8	chr10	-	3096	24	novel_in_catalog	ARMH3	novel	2464	3	NA	NA	-11	-824	no_combination_of_known_junctions	FALSE	canonical	1	12544	junction_4	46579.97411367896	NA	3	NA	TRUE	NA	NA	NA	C	coding	619	1860	132	1991	15.0	41	False	AATAAA	-26
PB.6680.3	chr2	+	5828	20	incomplete-splice_match	RANBP2	ENST00000283195.10	11711	29	17	19553	17	13161	3prime_fragment	FALSE	canonical	1	1248	junction_13	136517.4864180217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1906	5718	110	5827	65.0	16	True	TTTAAA	-23
PB.6680.2	chr2	+	10190	29	novel_not_in_catalog	RANBP2	novel	11711	29	NA	NA	7	-1511	any annotated donor/acceptor	FALSE	canonical	1	1248	junction_13	252616.0257458063	NA	0	NA	TRUE	NA	NA	NA	C	coding	3223	9672	120	9791	40.0	6	True	AATAAA	-23
PB.6680.1	chr2	+	9956	29	full-splice_match	RANBP2	ENST00000283195.10	11711	29	48	1707	-24	-1707	multi-exon	FALSE	canonical	1	1248	junction_13	248475.032865526	NA	96	6	TRUE	NA	NA	NA	C	coding	3224	9675	79	9753	15.0	-65	False	AATAAA	-18
PB.6891.2	chr2	+	5729	8	full-splice_match	FAM171B	ENST00000304698.9	5826	8	89	8	-20	-8	multi-exon	FALSE	canonical	1	83099	junction_4	27642.024132151557	NA	3	NA	TRUE	NA	NA	NA	C	coding	826	2481	115	2595	25.0	-2	True	AATAAA	-15
PB.5389.1	chr18	+	2480	7	full-splice_match	RAB31	ENST00000578921.5	4055	7	127	1448	-15	-1448	multi-exon	FALSE	canonical	1	266294	junction_1	79139.62810894566	NA	1	NA	TRUE	NA	NA	NA	A	coding	194	585	118	702	95.0	-11	True	AAGAAA	-24
PB.6952.4	chr2	+	1841	15	novel_in_catalog	NOP58	novel	2046	15	NA	NA	-7	-376	combination_of_known_junctions	FALSE	canonical	1	44092	junction_3	408205.5719835639	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1350	492	1841	20.0	-13	True	NA	NA
PB.11604.8	chr9	-	2878	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	28	-220	-10	220	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	522	1163	60.0	0	True	ATTAAA	-9
PB.2759.1	chr12	-	4624	2	full-splice_match	LINC01481	ENST00000549651.1	883	2	9	-3750	-2	3750	multi-exon	FALSE	canonical	1	62606	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	24	True	NA	NA
PB.2759.2	chr12	-	4402	2	full-splice_match	LINC01481	ENST00000553135.1	452	2	-17	-3933	-15	3750	multi-exon	FALSE	canonical	1	47093	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.6990.133	chr2	-	6150	32	incomplete-splice_match	FN1	ENST00000432072.6	7759	45	-1	20627	0	667	3prime_fragment	FALSE	canonical	1	2230192	junction_7	2002178.0426613924	NA	1	NA	TRUE	NA	NA	NA	C	coding	1723	5172	267	5438	85.0	-1	True	NA	NA
PB.10118.2	chr6	-	687	3	full-splice_match	NDUFAF4	ENST00000316149.7	2399	3	10	1702	3	-3	multi-exon	FALSE	canonical	1	413503	junction_2	97343.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	71	598	35.0	-9	True	AATAAA	-15
PB.10118.1	chr6	-	2398	3	full-splice_match	NDUFAF4	ENST00000316149.7	2399	3	0	1	0	-1	multi-exon	FALSE	canonical	1	413503	junction_2	97343.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	81	608	20.0	-19	True	AATAAA	-20
PB.9069.15	chr4	+	3263	7	incomplete-splice_match	GALNT7	ENST00000265000.8	4307	12	129358	0	75	0	5prime_fragment	FALSE	canonical	1	227341	junction_1	67248.061033799	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	117	1013	0.0	NA	False	AATAAA	-19
PB.5915.14	chr19	+	2542	18	novel_not_in_catalog	UBA2	novel	754	7	NA	NA	47	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	289674.1974277392	NA	2	1	TRUE	NA	NA	NA	C	coding	619	1860	14	1873	25.0	28	True	AATAAA	-20
PB.5915.13	chr19	+	2606	17	full-splice_match	UBA2	ENST00000246548.8	4023	17	56	1361	46	0	multi-exon	FALSE	canonical	1	250667	junction_9	255848.2917784162	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	15	1937	25.0	27	True	AATAAA	-20
PB.5915.12	chr19	+	2530	16	novel_in_catalog	UBA2	novel	754	7	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	1	31714	junction_1	303501.1294666884	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	24	1862	25.0	18	True	AATAAA	-19
PB.5915.11	chr19	+	2869	18	novel_not_in_catalog	UBA2	novel	754	7	NA	NA	18	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	321974.98184796906	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	566	2200	25.0	-1	True	AATAAA	-20
PB.5915.10	chr19	+	2323	13	novel_in_catalog	UBA2	novel	754	7	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	5545	junction_1	325891.4915614381	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	53	1654	25.0	-11	True	AATAAA	-20
PB.11043.11	chr8	+	1836	13	incomplete-splice_match	CDCA2	ENST00000330560.7	3731	15	237	19306	35	2779	3prime_fragment	FALSE	canonical	1	128822	junction_3	21629.752011439912	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1596	241	1836	70.0	1	True	AATACA	-16
PB.11043.10	chr8	+	3429	15	novel_not_in_catalog	CDCA2	novel	3731	15	NA	NA	38	-1	any annotated donor/acceptor	FALSE	canonical	1	3624	junction_1	46512.78056231164	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	224	3295	45.0	4	True	AATAAA	-22
PB.3834.1	chr15	-	2451	1	genic	PATL2	novel	NA	NA	NA	NA	-51	-34154	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	130	393	9	401	80.0	-52	True	NA	NA
PB.8318.2	chr3	+	2093	12	novel_in_catalog	POGLUT1	novel	3533	11	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	5073	junction_5	60956.21476474963	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	684	1385	90.0	-6	True	NA	NA
PB.11775.2	chr9	-	4580	2	full-splice_match	ZBTB26	ENST00000373654.1	2047	2	-3	-2530	-3	-4	multi-exon	FALSE	canonical	1	1416	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	441	1326	216	1541	20.0	9979	False	AATAAA	-12
PB.7480.1	chr21	+	1927	1	intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-7167	False	NA	NA
PB.9252.4	chr5	-	1603	10	novel_in_catalog	CENPK	novel	1697	11	NA	NA	-21	-1	no_combination_of_known_junctions	FALSE	canonical	1	14642	junction_8	98649.64337354897	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	270	896	25.0	-57	False	AATAAA	-19
PB.10474.4	chr7	+	4401	16	full-splice_match	AVL9	ENST00000318709.8	6982	16	24	2557	-8	-2	multi-exon	FALSE	canonical	1	148234	junction_6	69687.45190124898	NA	4	NA	TRUE	NA	NA	NA	C	coding	648	1947	198	2144	30.0	4	True	AATAAA	-19
PB.10474.5	chr7	+	6671	16	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	7	0	intron_retention	FALSE	canonical	1	21178	junction_9	87950.27669303957	NA	3	NA	TRUE	NA	NA	NA	C	coding	550	1653	215	1867	20.0	-13	True	AATAAA	-21
PB.10474.6	chr7	+	2636	16	full-splice_match	AVL9	ENST00000318709.8	6982	16	7	4339	7	176	multi-exon	FALSE	canonical	1	148234	junction_6	69687.45190124898	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	215	2161	25.0	-13	True	TATAAA	-40
PB.10474.7	chr7	+	2385	15	full-splice_match	AVL9	ENST00000409301.5	4336	15	-30	1981	7	18	multi-exon	FALSE	canonical	1	18474	junction_13	91006.34214906146	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	215	2107	25.0	-13	True	ATTAAA	-36
PB.10474.1	chr7	+	2498	17	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	0	5	any annotated donor/acceptor	FALSE	canonical	1	1386	junction_5	102633.73607145155	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	941	2233	25.0	-20	True	ATTAAA	-23
PB.10474.2	chr7	+	4127	16	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	3	-3	intron_retention	FALSE	canonical	1	21178	junction_9	87950.27669303957	NA	2	NA	TRUE	NA	NA	NA	C	coding	550	1653	219	1871	30.0	-17	True	AATAAA	-18
PB.10474.3	chr7	+	7033	17	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	5	1	intron_retention	FALSE	canonical	1	1386	junction_5	102633.73607145155	NA	2	NA	TRUE	NA	NA	NA	C	coding	430	1293	936	2228	20.0	-15	True	AATAAA	-22
PB.6913.2	chr2	-	2059	2	full-splice_match	CAVIN2	ENST00000304141.4	3229	2	182	988	182	-988	multi-exon	FALSE	canonical	1	261758	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	149	1426	70.0	10	True	AGTAAA	-14
PB.157.18	chr1	-	2079	11	full-splice_match	HNRNPR	ENST00000302271.10	2629	11	-55	605	0	-60	multi-exon	FALSE	canonical	1	118260	junction_8	538643.2705748768	NA	1	1	TRUE	NA	NA	NA	C	coding	633	1902	117	2018	65.0	332	False	NA	NA
PB.10474.8	chr7	+	6962	16	full-splice_match	AVL9	ENST00000318709.8	6982	16	10	10	10	0	multi-exon	FALSE	canonical	1	148234	junction_6	69687.45190124898	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	212	2158	20.0	-10	True	AATAAA	-21
PB.10474.9	chr7	+	2124	16	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	21178	junction_9	87950.27669303957	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	212	1864	30.0	-10	True	ATTAAA	-18
PB.1022.15	chr1	+	2394	22	full-splice_match	PTPRC	ENST00000529828.5	2336	22	-62	4	-4	-4	multi-exon	FALSE	canonical	1	197273	junction_3	344023.7654087485	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2253	140	2392	25.0	-53	True	NA	NA
PB.8435.18	chr3	+	1995	4	full-splice_match	ZBTB38	ENST00000507722.5	593	4	1	-1403	1	-418	multi-exon	FALSE	canonical	1	17194	junction_1	75182.85090069115	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1758	237	1994	55.0	0	True	NA	NA
PB.1022.12	chr1	+	2691	25	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-5	-6303	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	313157.6188029466	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2550	141	2690	75.0	-54	True	NA	NA
PB.9124.21	chr5	-	3677	14	full-splice_match	LPCAT1	ENST00000283415.3	3966	14	10	279	-5	-273	multi-exon	FALSE	canonical	1	315996	junction_13	137661.63025786975	NA	3	NA	TRUE	NA	NA	NA	C	coding	534	1605	124	1728	10.0	-9	True	GATAAA	-15
PB.9124.25	chr5	-	5277	2	incomplete-splice_match	LPCAT1	ENST00000507282.1	417	3	34	-53	34	53	intron_retention	FALSE	canonical	1	632170	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	122	369	1689	2057	35.0	-6	True	ATTAAA	-13
PB.8642.1	chr4	+	4129	4	novel_not_in_catalog	ZNF718	novel	3495	4	NA	NA	5	668	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	B	coding	217	654	819	1472	35.0	0	True	AATAAA	-15
PB.8318.9	chr3	+	1887	10	incomplete-splice_match	POGLUT1	ENST00000295588.8	3533	11	797	1562	735	0	5prime_fragment	FALSE	canonical	1	106226	junction_3	21418.080768417818	NA	2	NA	TRUE	NA	NA	NA	C	coding	317	954	226	1179	90.0	-130	False	NA	NA
PB.9979.1	chr6	+	6179	9	full-splice_match	NFYA	ENST00000353205.5	1660	9	-74	-4445	-36	2419	multi-exon	FALSE	canonical	1	128895	junction_2	58887.72811460806	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	238	1194	45.0	-985	False	AATAAA	-13
PB.8313.5	chr3	-	3467	8	novel_not_in_catalog	IGSF11	novel	3525	8	NA	NA	39	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	13531.558211553207	NA	6	1	TRUE	NA	NA	NA	C	coding	348	1047	535	1581	45.0	-4	True	AATAAA	-14
PB.8601.15	chr3	+	6444	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	48	1	6	0	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	6	NA	TRUE	NA	NA	NA	C	coding	1015	3048	187	3234	15.0	-16	True	TATAAA	-18
PB.7243.1	chr20	-	2493	4	full-splice_match	PXMP4	ENST00000409299.7	5684	4	0	3191	0	1324	multi-exon	FALSE	canonical	1	102211	junction_3	20711.399829294227	NA	0	NA	TRUE	NA	NA	NA	A	coding	212	639	94	732	90.0	-32	True	NA	NA
PB.3645.17	chr14	-	6049	27	full-splice_match	DICER1	ENST00000343455.7	10277	27	-24	4252	-24	-12	multi-exon	FALSE	canonical	1	56664	junction_26	71003.36729294175	NA	0	NA	TRUE	NA	NA	NA	C	coding	1912	5739	293	6031	80.0	8	True	TTTAAA	-5
PB.8999.1	chr4	-	5541	21	full-splice_match	TBC1D9	ENST00000442267.2	5306	21	-253	18	-253	-18	multi-exon	TRUE	canonical	1	56684	junction_20	54079.22279175247	NA	0	NA	TRUE	NA	NA	NA	C	coding	1266	3801	329	4129	20.0	0	True	AATAAA	-18
PB.7342.9	chr20	-	3302	13	full-splice_match	STAU1	ENST00000371828.7	3411	13	109	0	109	0	multi-exon	FALSE	canonical	1	120591	junction_8	285348.06325355626	NA	2	NA	TRUE	NA	NA	NA	C	coding	502	1509	257	1765	15.0	232	False	AATAAA	-13
PB.7342.8	chr20	-	3290	13	full-splice_match	STAU1	ENST00000360426.8	3211	13	103	-182	103	0	multi-exon	FALSE	canonical	1	333209	junction_3	235513.9006201238	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	263	1753	15.0	226	False	AATAAA	-13
PB.7342.3	chr20	-	3805	15	novel_in_catalog	STAU1	novel	3684	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	36478	junction_14	363320.8128927743	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	535	2268	15.0	-1	True	AATAAA	-13
PB.3645.11	chr14	-	7439	29	novel_in_catalog	DICER1	novel	10277	27	NA	NA	13	-555	combination_of_known_junctions	FALSE	canonical	1	37694	junction_28	85094.55519312211	NA	1	NA	TRUE	NA	NA	NA	C	coding	1912	5739	423	6161	85.0	0	True	GATAAA	-25
PB.7342.1	chr20	-	3360	13	novel_not_in_catalog	STAU1	novel	3684	14	NA	NA	1435	5	intron_retention	FALSE	canonical	1	1042	junction_12	335629.5035045154	NA	5	1	TRUE	NA	NA	NA	C	coding	502	1509	308	1816	20.0	1558	False	AATAAA	-20
PB.7342.7	chr20	-	3516	14	full-splice_match	STAU1	ENST00000340954.11	3334	14	0	-182	0	0	multi-exon	FALSE	canonical	1	36478	junction_13	322914.19908390526	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	489	1979	15.0	-1	True	AATAAA	-13
PB.7342.6	chr20	-	3534	14	novel_in_catalog	STAU1	novel	3684	14	NA	NA	166	0	intron_retention	FALSE	canonical	1	70219	junction_12	341770.06594309217	NA	2	1	TRUE	NA	NA	NA	C	coding	583	1752	246	1997	15.0	289	False	AATAAA	-13
PB.7342.5	chr20	-	3637	15	novel_in_catalog	STAU1	novel	3684	14	NA	NA	25	0	intron_retention	FALSE	canonical	1	15698	junction_13	357418.9401829955	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	490	2100	15.0	-9	True	AATAAA	-13
PB.3645.10	chr14	-	7317	27	full-splice_match	DICER1	ENST00000343455.7	10277	27	-32	2992	-32	-555	multi-exon	FALSE	canonical	1	56664	junction_26	71003.36729294175	NA	1	NA	TRUE	NA	NA	NA	C	coding	1912	5739	301	6039	85.0	0	True	GATAAA	-25
PB.10578.11	chr7	+	4133	7	novel_not_in_catalog	TMEM248	novel	4229	7	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	1179	junction_1	345611.08916751435	NA	3	NA	TRUE	NA	NA	NA	C	coding	314	945	161	1105	5.0	14	True	AATAAA	-13
PB.525.3	chr1	-	2737	12	novel_in_catalog	GBP4	novel	6127	11	NA	NA	52	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60117.64328903869	NA	3	NA	TRUE	NA	NA	NA	C	coding	640	1923	47	1969	35.0	-3	True	AATAAA	-14
PB.9979.7	chr6	+	2806	10	novel_not_in_catalog	NFYA	novel	3811	10	NA	NA	12	-975	any annotated donor/acceptor	FALSE	canonical	1	42647	junction_2	99830.32382714232	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	190	1215	40.0	-18	True	AATAAA	-22
PB.1961.8	chr11	+	2765	9	novel_in_catalog	STX3	novel	3236	12	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	12338	junction_7	143177.9670235067	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	419	886	15.0	1	True	AATAAA	-22
PB.1961.9	chr11	+	3157	11	novel_not_in_catalog	STX3	novel	3236	12	NA	NA	382	-3	any annotated donor/acceptor	FALSE	canonical	1	154	junction_1	111793.47524560636	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	502	1278	15.0	-43	False	AATAAA	-22
PB.1961.6	chr11	+	2863	10	full-splice_match	STX3	ENST00000529177.5	1571	10	-74	-1218	2	-3	multi-exon	FALSE	canonical	1	24407	junction_9	110794.2979268839	NA	14	2	TRUE	NA	NA	NA	C	coding	277	834	229	1062	15.0	0	True	AATAAA	-22
PB.1961.7	chr11	+	2976	11	full-splice_match	STX3	ENST00000337979.8	3299	11	320	3	3	-3	multi-exon	FALSE	canonical	1	192624	junction_1	71825.91174423057	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	228	1097	15.0	1	True	AATAAA	-22
PB.1961.4	chr11	+	3062	11	novel_not_in_catalog	STX3	novel	3236	12	NA	NA	-6	-3	any annotated donor/acceptor	FALSE	canonical	1	7558	junction_10	110737.24228375024	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	237	1106	15.0	-8	True	AATAAA	-22
PB.1961.5	chr11	+	2690	8	novel_in_catalog	STX3	novel	3236	12	NA	NA	-1	-4	no_combination_of_known_junctions	FALSE	canonical	1	3964	junction_2	150141.92174440168	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	348	890	15.0	-3	True	AATAAA	-21
PB.1961.2	chr11	+	2462	11	novel_not_in_catalog	STX3	novel	3236	12	NA	NA	-27	-707	any annotated donor/acceptor	FALSE	canonical	1	2970	junction_9	136756.0935413483	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	258	1121	90.0	2	True	NA	NA
PB.1961.3	chr11	+	2905	10	novel_in_catalog	STX3	novel	3236	12	NA	NA	-26	-3	combination_of_known_junctions	FALSE	canonical	1	18059	junction_2	111339.76727062323	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	448	1026	15.0	3	True	AATAAA	-22
PB.68.1	chr1	-	5576	10	novel_in_catalog	ENO1	novel	1781	12	NA	NA	11	0	intron_retention	FALSE	canonical	1	5131498	junction_8	6340205.39628035	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	4202	5218	10.0	2	True	AATAAA	-23
PB.1961.1	chr11	+	2136	11	full-splice_match	STX3	ENST00000337979.8	3299	11	279	884	-38	337	multi-exon	FALSE	canonical	1	192624	junction_1	71825.91174423057	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	269	1138	65.0	-546	False	AATAAA	-22
PB.9979.9	chr6	+	2813	10	novel_not_in_catalog	NFYA	novel	3811	10	NA	NA	15	-980	any annotated donor/acceptor	TRUE	canonical	1	24741	junction_2	93899.4793841653	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	187	1227	30.0	-15	True	AATAAA	-17
PB.10442.6	chr7	-	6167	23	full-splice_match	OSBPL3	ENST00000313367.6	6760	23	10	583	10	-583	multi-exon	FALSE	canonical	1	104396	junction_15	53854.266638315916	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	446	3106	25.0	-24	True	AATAAA	-19
PB.9985.2	chr6	+	2226	3	full-splice_match	TOMM6	ENST00000398881.3	595	3	-38	-1593	-35	1591	multi-exon	FALSE	canonical	1	2322296	junction_1	8818.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	1106	1465	50.0	-2048	False	AATAAA	-22
PB.4704.1	chr17	-	3608	17	full-splice_match	NUP88	ENST00000573584.5	2916	17	498	-1190	0	1190	multi-exon	TRUE	canonical	1	413925	junction_12	90148.25874141649	NA	3	NA	TRUE	NA	NA	NA	C	coding	741	2226	13	2238	25.0	-1	True	AATAAA	-14
PB.4704.2	chr17	-	2342	17	full-splice_match	NUP88	ENST00000573584.5	2916	17	498	76	0	0	multi-exon	FALSE	canonical	1	413925	junction_12	90148.25874141649	NA	1	1	TRUE	NA	NA	NA	C	coding	741	2226	13	2238	10.0	-1	True	TATAAA	-15
PB.4704.3	chr17	-	2263	16	novel_in_catalog	NUP88	novel	1195	2	NA	NA	-4	2	no_combination_of_known_junctions	FALSE	canonical	1	10078	junction_9	162332.6350981014	NA	2	NA	TRUE	NA	NA	NA	C	coding	708	2127	31	2157	5.0	-19	False	TATAAA	-17
PB.4704.4	chr17	-	3329	13	novel_in_catalog	NUP88	novel	1195	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	1048	junction_12	222924.02171110714	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	533	1246	10.0	-1	True	TATAAA	-15
PB.4704.5	chr17	-	2408	17	full-splice_match	NUP88	ENST00000225696.8	2194	17	-214	0	-4	0	multi-exon	FALSE	canonical	1	12078	junction_6	157808.28550169466	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	31	2304	10.0	-19	False	TATAAA	-15
PB.4704.6	chr17	-	2193	16	novel_in_catalog	NUP88	novel	1195	2	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	22394	junction_10	159754.28822224322	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	1302	2090	10.0	-1	True	TATAAA	-14
PB.4704.7	chr17	-	1899	14	incomplete-splice_match	NUP88	ENST00000573584.5	2916	17	498	1389	0	129	3prime_fragment	FALSE	canonical	1	413925	junction_9	65638.3326510287	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1887	13	1899	65.0	-1	True	NA	NA
PB.4704.8	chr17	-	1810	13	incomplete-splice_match	NUP88	ENST00000573584.5	2916	17	489	1625	5	-107	3prime_fragment	FALSE	canonical	1	413925	junction_8	54887.10734063349	NA	1	1	TRUE	NA	NA	NA	C	coding	596	1788	22	1809	75.0	-10	True	AATAAA	-45
PB.4704.9	chr17	-	2429	11	full-splice_match	NUP88	ENST00000574867.5	2081	11	9	-357	8	357	multi-exon	FALSE	canonical	1	413925	junction_6	55958.549697879054	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	4	1677	75.0	8	True	NA	NA
PB.11180.1	chr8	+	3254	6	novel_not_in_catalog	MSC-AS1	novel	485	4	NA	NA	-64	-1351	any annotated donor/acceptor	FALSE	canonical	1	323	junction_4	28287.156374581024	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-282	False	AATAAA	-21
PB.3090.20	chr13	-	2189	4	novel_in_catalog	HMGB1	novel	5485	5	NA	NA	8	-62	intron_retention	FALSE	canonical	1	6253	junction_3	170319.33602174735	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	150	674	75.0	2	True	NA	NA
PB.3090.22	chr13	-	2372	3	novel_in_catalog	HMGB1	novel	5485	5	NA	NA	3	-62	intron_retention	FALSE	canonical	1	6253	junction_2	35923.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	123	372	486	857	75.0	-3	True	NA	NA
PB.5078.19	chr17	+	4720	6	full-splice_match	NFE2L1	ENST00000361665.7	4729	6	8	1	-1	0	multi-exon	FALSE	canonical	1	95672	junction_2	704166.6152973741	NA	2	NA	TRUE	NA	NA	NA	C	coding	761	2286	597	2882	20.0	-3	True	AATAAA	-17
PB.5078.18	chr17	+	4683	5	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	0	4	intron_retention	FALSE	canonical	1	504837	junction_1	580796.9569024855	NA	3	NA	TRUE	NA	NA	NA	C	coding	742	2229	605	2833	20.0	-9934	False	AATAAA	-29
PB.9295.5	chr5	-	2816	20	full-splice_match	GFM2	ENST00000345239.6	2856	20	-18	58	7	-6	multi-exon	FALSE	canonical	1	21554	junction_8	85382.0584557023	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	227	2425	50.0	-26	True	AATAAA	-13
PB.2743.2	chr12	+	3181	4	full-splice_match	IFNG-AS1	ENST00000538665.5	1791	4	14	-1404	3	1404	multi-exon	FALSE	canonical	1	12982	junction_2	2763.641197164832	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-20	True	ATTAAA	-32
PB.5078.15	chr17	+	4138	5	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	-1	-525	intron_retention	FALSE	canonical	1	504837	junction_1	580796.9569024855	NA	3	NA	TRUE	NA	NA	NA	C	coding	742	2229	597	2825	20.0	-3	True	CATAAA	-20
PB.5078.14	chr17	+	4666	5	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	95672	junction_2	789863.2136561684	NA	3	NA	TRUE	NA	NA	NA	C	coding	731	2196	627	2822	20.0	-9956	False	AATAAA	-23
PB.5078.17	chr17	+	4255	6	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	-19	-525	intron_retention	FALSE	canonical	1	504837	junction_1	625769.0534653818	NA	3	NA	TRUE	NA	NA	NA	C	coding	772	2319	624	2942	20.0	-9953	False	CATAAA	-20
PB.5078.16	chr17	+	4248	6	full-splice_match	NFE2L1	ENST00000361665.7	4729	6	-21	502	-21	-501	multi-exon	FALSE	canonical	1	95672	junction_2	704166.6152973741	NA	5	NA	TRUE	NA	NA	NA	C	coding	761	2286	626	2911	5.0	-9955	False	CATAAA	-44
PB.5078.11	chr17	+	4129	5	novel_in_catalog	NFE2L1	novel	568	2	NA	NA	-6	-527	intron_retention	FALSE	canonical	1	95672	junction_2	810352.6917062101	NA	2	NA	TRUE	NA	NA	NA	C	coding	731	2196	623	2818	20.0	-6	True	CATAAA	-18
PB.5078.10	chr17	+	3703	7	novel_not_in_catalog	NFE2L1	novel	568	2	NA	NA	0	-581	intron_retention	FALSE	canonical	1	5379	junction_2	697800.7015758909	NA	3	NA	TRUE	NA	NA	NA	C	coding	772	2319	128	2446	45.0	0	True	AGTAAA	-13
PB.5078.13	chr17	+	4671	6	novel_not_in_catalog	NFE2L1	novel	568	2	NA	NA	6	3	intron_retention	FALSE	non_canonical	0	0	junction_1	740781.3320713205	NA	6	NA	TRUE	NA	NA	NA	C	coding	742	2229	601	2829	20.0	17	True	AATAAA	-21
PB.5078.12	chr17	+	4071	6	full-splice_match	NFE2L1	ENST00000362042.7	4774	6	6	697	2	-696	multi-exon	FALSE	canonical	1	388263	junction_1	646623.2602494283	NA	6	NA	TRUE	NA	NA	NA	C	coding	772	2319	611	2929	55.0	6	True	AAAACA	-22
PB.9441.11	chr5	-	2468	16	novel_in_catalog	KIF3A	novel	6325	17	NA	NA	36	170	no_combination_of_known_junctions	FALSE	canonical	1	2780	junction_8	68873.61415004217	NA	0	NA	TRUE	NA	NA	NA	B	coding	666	2001	118	2118	80.0	9	True	NA	NA
PB.8446.1	chr3	+	4452	12	full-splice_match	TRPC1	ENST00000273482.10	4324	12	-131	3	-36	-3	multi-exon	TRUE	canonical	1	30212	junction_1	20489.681802804193	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	616	2802	25.0	-30	True	AATAAA	-18
PB.11180.5	chr8	+	4386	4	incomplete-splice_match	MSC-AS1	ENST00000522519.5	1537	5	948	-3273	-32	8	5prime_fragment	FALSE	canonical	1	34369	junction_3	11787.496661953102	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	18	True	AATAAA	-19
PB.8446.3	chr3	+	3805	11	novel_in_catalog	TRPC1	novel	3061	13	NA	NA	-35	-3	combination_of_known_junctions	FALSE	canonical	1	12784	junction_1	23905.747645493124	NA	2	NA	TRUE	NA	NA	NA	C	coding	648	1947	209	2155	25.0	-27	True	AATAAA	-18
PB.9441.10	chr5	-	2518	16	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	26	170	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	81525.41556142	NA	1	1	TRUE	NA	NA	NA	B	coding	423	1272	128	1399	80.0	-1	True	NA	NA
PB.9441.13	chr5	-	1462	10	incomplete-splice_match	KIF3A	ENST00000378746.8	6325	17	75	10902	9	-2994	3prime_fragment	FALSE	canonical	1	47806	junction_1	57649.58505969974	NA	10	2	TRUE	NA	NA	NA	B	coding	439	1317	145	1461	70.0	-18	True	NA	NA
PB.1765.22	chr11	-	2809	18	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	5321	junction_17	485708.081860966	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	442	1569	20.0	5	True	ATTAAA	-14
PB.52.4	chr1	-	3303	7	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	265459.60134328034	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	447	1013	25.0	1	True	AATAAA	-20
PB.52.5	chr1	-	3262	7	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	-17	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	265459.60134328034	NA	2	2	TRUE	NA	NA	NA	C	coding	188	567	474	1040	25.0	-26	True	AATAAA	-20
PB.52.6	chr1	-	3146	6	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	-8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	235604.24386958737	NA	2	1	TRUE	NA	NA	NA	C	coding	284	855	70	924	25.0	-17	True	AATAAA	-20
PB.9441.12	chr5	-	2282	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	24	-43	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	67334.74576776373	NA	1	1	TRUE	NA	NA	NA	B	coding	423	1272	130	1401	35.0	-3	True	AATAAA	-17
PB.52.1	chr1	-	3225	6	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	235604.24386958737	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	80	934	20.0	-27	True	AATAAA	-21
PB.4732.1	chr17	+	2696	1	full-splice_match	KCTD11	ENST00000333751.5	2783	1	84	3	84	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	228	687	710	1396	30.0	-2910	False	AATAAA	-18
PB.52.3	chr1	-	3544	6	novel_in_catalog	ICMT	novel	4771	5	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	1	518	junction_1	235413.36279200466	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	82	936	25.0	-29	True	AATAAA	-20
PB.6114.6	chr19	-	3909	12	novel_not_in_catalog	CARD8	novel	1363	4	NA	NA	-3	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	79537.67006699373	NA	9	3	TRUE	NA	NA	NA	C	coding	436	1311	538	1848	25.0	-4	True	AATAAA	-25
PB.6114.5	chr19	-	3824	12	full-splice_match	CARD8	ENST00000520153.5	2617	12	-68	-1139	-47	-4	multi-exon	FALSE	canonical	1	81821	junction_9	58173.9962948145	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	299	1762	25.0	0	True	AATAAA	-26
PB.6114.4	chr19	-	3768	12	full-splice_match	CARD8	ENST00000521613.5	1903	12	53	-1918	0	-4	multi-exon	FALSE	canonical	1	81821	junction_9	64255.39299474474	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	243	1706	25.0	17	True	AATAAA	-26
PB.6114.3	chr19	-	4048	14	novel_in_catalog	CARD8	novel	1363	4	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	37770	junction_5	66526.98092739223	NA	3	NA	TRUE	NA	NA	NA	C	coding	536	1611	375	1985	20.0	-4	True	AATAAA	-27
PB.6114.2	chr19	-	5360	12	novel_in_catalog	CARD8	novel	1363	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	118222	junction_11	56144.31182568868	NA	21	1	TRUE	NA	NA	NA	C	coding	537	1614	141	1754	60.0	6063	False	AATAAA	-20
PB.6114.1	chr19	-	5579	14	novel_not_in_catalog	CARD8	novel	1363	4	NA	NA	3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	72144.12359097628	NA	7	NA	TRUE	NA	NA	NA	C	coding	537	1614	345	1958	40.0	27	True	AATAAA	-35
PB.2606.25	chr12	+	2960	16	novel_in_catalog	LARP4	novel	567	4	NA	NA	15	-2	intron_retention	FALSE	canonical	1	3995	junction_1	79783.115153911	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	399	2363	30.0	-154	False	AGTAAA	-20
PB.8779.34	chr4	+	3324	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	212525.69536755985	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	198	1913	15.0	-1	True	TATAAA	-34
PB.8779.35	chr4	+	1886	18	full-splice_match	FIP1L1	ENST00000337488.10	2198	18	-3	315	-1	-49	multi-exon	FALSE	canonical	1	161024	junction_1	220806.79141835874	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1689	198	1886	70.0	-1	True	NA	NA
PB.5133.1	chr17	-	850	5	full-splice_match	MRPS23	ENST00000313608.12	5621	5	7	4764	-5	1255	multi-exon	FALSE	canonical	1	914188	junction_4	228321.20956341308	NA	0	NA	TRUE	NA	NA	NA	A	coding	190	573	40	612	40.0	-6	True	AATAAA	-26
PB.8779.37	chr4	+	1779	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-1	-48	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	233560.91378880024	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	198	1778	70.0	-1	True	NA	NA
PB.8779.30	chr4	+	1842	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-49	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	213216.39660756043	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1644	199	1842	70.0	-2	True	NA	NA
PB.8779.31	chr4	+	1674	15	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-47	any annotated donor/acceptor	FALSE	canonical	1	415	junction_10	256482.9506402374	NA	1	1	TRUE	NA	NA	NA	C	coding	319	960	199	1158	70.0	-2	True	NA	NA
PB.8779.32	chr4	+	1737	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-49	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	234714.10969197418	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1539	199	1737	70.0	-2	True	NA	NA
PB.8779.33	chr4	+	3463	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-1	183	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	201210.13564651483	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	198	1868	85.0	-1	True	NA	NA
PB.8779.38	chr4	+	2085	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	201210.13564651483	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	192	1862	50.0	5	True	AATAAA	-23
PB.8779.39	chr4	+	1856	17	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	0	-49	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	247347.12022122752	NA	3	1	TRUE	NA	NA	NA	C	coding	378	1137	197	1333	70.0	0	True	NA	NA
PB.10509.2	chr7	+	1495	7	full-splice_match	STK17A	ENST00000319357.5	3368	7	43	1830	34	-228	multi-exon	FALSE	canonical	1	315569	junction_1	175292.21102173618	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	137	1381	55.0	0	True	NA	NA
PB.6534.5	chr2	-	2675	10	novel_in_catalog	C2orf42	novel	2581	10	NA	NA	-7	7	combination_of_known_junctions	FALSE	canonical	1	205	junction_9	30658.896187437975	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	486	2210	25.0	10	True	AATAAA	-18
PB.9818.2	chr6	+	1648	4	full-splice_match	ZSCAN9	ENST00000252207.9	1621	4	-10	-17	7	1	multi-exon	FALSE	canonical	1	42829	junction_1	54871.90021009539	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	159	1343	25.0	-14	True	AATAAA	-26
PB.9818.1	chr6	+	2087	3	incomplete-splice_match	ZSCAN9	ENST00000531979.5	1601	4	-53	4291	-25	-39	3prime_fragment	FALSE	canonical	1	17192	junction_1	78155.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	166	951	25.0	-57	False	ATTAAA	-16
PB.1265.1	chr10	-	3115	1	full-splice_match	AL359878.1	ENST00000615314.1	3104	1	14	-25	14	25	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	13	True	ATTAAA	-41
PB.8567.1	chr3	+	4260	16	full-splice_match	EPHB3	ENST00000330394.2	4236	16	-26	2	-26	-2	multi-exon	FALSE	canonical	1	22176	junction_1	41434.87839940324	NA	5	1	TRUE	NA	NA	NA	A	coding	998	2997	479	3475	10.0	3	True	AATAAA	-13
PB.5659.1	chr19	+	3157	21	novel_not_in_catalog	ADGRE1	novel	2939	20	NA	NA	-31	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	19406.71107754995	NA	3	1	TRUE	NA	NA	NA	A	coding	659	1980	755	2734	30.0	1	True	AATAAA	-35
PB.8433.15	chr3	+	4675	8	full-splice_match	SLC25A36	ENST00000502594.5	1163	8	-60	-3452	5	2	multi-exon	FALSE	canonical	1	14310	junction_4	154740.39911492052	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	221	619	30.0	-8	True	ATTAAA	-12
PB.5490.1	chr18	-	4983	8	full-splice_match	TXNL1	ENST00000217515.10	6894	8	44	1867	44	-7	multi-exon	FALSE	canonical	1	962043	junction_7	182451.25793158106	NA	3	NA	TRUE	NA	NA	NA	A	coding	289	870	162	1031	35.0	-10	True	ATTAAA	-22
PB.6534.4	chr2	-	2220	9	novel_not_in_catalog	C2orf42	novel	2581	10	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	2326	junction_6	40633.212117675364	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	369	980	25.0	-1	True	AATAAA	-22
PB.4079.3	chr15	+	5178	14	novel_not_in_catalog	CRTC3	novel	5209	15	NA	NA	-23	-1	any annotated donor/acceptor	FALSE	canonical	1	592	junction_8	67261.27469166733	NA	2	1	TRUE	NA	NA	NA	C	coding	319	960	1015	1974	5.0	-33	True	ATTAAA	-26
PB.4079.2	chr15	+	2327	3	incomplete-splice_match	CRTC3	ENST00000268184.10	2537	15	-167	47253	-24	-17	3prime_fragment	FALSE	canonical	1	141179	junction_2	23811.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	172	561	90.0	-34	True	NA	NA
PB.4079.1	chr15	+	5337	16	novel_not_in_catalog	CRTC3	novel	5209	15	NA	NA	-28	-1	any annotated donor/acceptor	FALSE	canonical	1	2782	junction_4	63998.74061122001	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	847	2133	5.0	-38	True	ATTAAA	-26
PB.7938.6	chr3	-	3462	6	full-splice_match	VGLL4	ENST00000273038.7	3725	6	207	56	-79	-56	multi-exon	FALSE	canonical	1	53271	junction_5	111505.52008039781	NA	6	NA	TRUE	NA	NA	NA	C	coding	290	873	160	1032	30.0	-1	True	AAAAAG	-13
PB.4079.6	chr15	+	5123	14	novel_in_catalog	CRTC3	novel	5209	15	NA	NA	-11	-1	no_combination_of_known_junctions	FALSE	canonical	1	7025	junction_1	53080.74421919784	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	159	1919	5.0	-21	True	ATTAAA	-26
PB.4079.5	chr15	+	3481	15	full-splice_match	CRTC3	ENST00000268184.10	2537	15	-154	-790	-11	790	multi-exon	FALSE	canonical	1	122949	junction_3	30003.497341041388	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	159	2018	35.0	-21	True	AGTAAA	-16
PB.4079.4	chr15	+	5231	15	full-splice_match	CRTC3	ENST00000268184.10	2537	15	-163	-2531	-20	-1	multi-exon	FALSE	canonical	1	122949	junction_3	30003.497341041388	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	168	2027	5.0	-30	True	ATTAAA	-26
PB.1388.12	chr10	+	3712	10	novel_in_catalog	RASSF4	novel	4350	10	NA	NA	11	4	intron_retention	FALSE	canonical	1	5706	junction_3	104667.61020039451	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	309	1007	45.0	1	True	AATAAA	-19
PB.1388.11	chr10	+	2549	12	novel_not_in_catalog	RASSF4	novel	4350	10	NA	NA	-18	5	any annotated donor/acceptor	FALSE	canonical	1	7351	junction_9	116619.82176597284	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	132	824	45.0	-28	True	AATAAA	-20
PB.1388.10	chr10	+	2576	9	novel_in_catalog	RASSF4	novel	4350	10	NA	NA	-18	-7	intron_retention	FALSE	canonical	1	32695	junction_3	95344.01988055871	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1029	1547	2575	70.0	-28	True	NA	NA
PB.11021.4	chr8	+	2221	9	incomplete-splice_match	SORBS3	ENST00000523965.5	2028	10	278	1	-45	-1	5prime_fragment	FALSE	canonical	1	462409	junction_2	127589.96210266455	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	307	1455	5.0	0	True	AATAAA	-15
PB.6782.7	chr2	-	3896	14	full-splice_match	STAM2	ENST00000263904.4	5701	14	7	1798	7	-1798	multi-exon	FALSE	canonical	1	138483	junction_13	48716.85664175444	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	344	1921	30.0	6	True	AATAAA	-19
PB.8473.47	chr3	+	4572	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-172	-1	no_combination_of_known_junctions	FALSE	canonical	1	17264	junction_1	402355.63872966357	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	234	1160	25.0	-763	False	AATAAA	-36
PB.3403.5	chr14	+	3276	10	incomplete-splice_match	TOGARAM1	ENST00000557423.5	6232	20	311	46213	285	-78	3prime_fragment	FALSE	canonical	1	5686	junction_5	35943.32157545465	NA	1	NA	TRUE	NA	NA	NA	C	coding	954	2865	22	2886	75.0	305	False	NA	NA
PB.3403.4	chr14	+	3792	11	novel_in_catalog	TOGARAM1	novel	6247	19	NA	NA	2	-78	combination_of_known_junctions	FALSE	canonical	1	8876	junction_7	28722.94091645213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1071	3216	305	3520	75.0	22	True	NA	NA
PB.10860.8	chr7	+	4895	1	novel_in_catalog	TMEM140	novel	1997	2	NA	NA	17	-150	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	86	261	149	409	65.0	2	True	NA	NA
PB.3403.1	chr14	+	6423	20	full-splice_match	TOGARAM1	ENST00000361462.6	6375	20	-49	1	-18	-1	multi-exon	FALSE	canonical	1	56424	junction_6	15670.932731168874	NA	0	NA	TRUE	NA	NA	NA	C	coding	1732	5199	356	5554	20.0	-29	True	AATAAA	-16
PB.3403.3	chr14	+	3757	10	incomplete-splice_match	TOGARAM1	ENST00000361577.7	6247	19	4	46213	-1	-78	3prime_fragment	FALSE	canonical	1	56424	junction_6	12713.058411446063	NA	0	NA	TRUE	NA	NA	NA	C	coding	1141	3423	334	3756	75.0	-7	True	NA	NA
PB.3403.2	chr14	+	2190	1	genic	TOGARAM1	novel	NA	NA	NA	NA	-18	-33025	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	611	1833	356	2188	70.0	-29	True	NA	NA
PB.5123.4	chr17	-	2940	4	full-splice_match	COX11	ENST00000299335.7	2497	4	109	-552	-22	552	multi-exon	FALSE	canonical	1	51537	junction_1	66567.04906082789	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	31	861	35.0	0	True	ACTAAA	-45
PB.5123.5	chr17	-	2368	4	full-splice_match	COX11	ENST00000299335.7	2497	4	131	-2	0	2	multi-exon	FALSE	canonical	1	51537	junction_1	66567.04906082789	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	9	839	5.0	-1	True	AATAAA	-22
PB.5123.6	chr17	-	1659	4	full-splice_match	COX11	ENST00000299335.7	2497	4	68	770	-14	-711	multi-exon	FALSE	canonical	1	51537	junction_1	66567.04906082789	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	72	902	75.0	-15	False	NA	NA
PB.5123.7	chr17	-	1459	4	full-splice_match	COX11	ENST00000299335.7	2497	4	133	905	1	792	multi-exon	FALSE	canonical	1	51537	junction_1	66567.04906082789	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	7	837	65.0	1	True	NA	NA
PB.10860.7	chr7	+	1715	2	novel_not_in_catalog	TMEM140	novel	1997	2	NA	NA	15	-318	any annotated donor/acceptor	FALSE	canonical	1	1481	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	260	817	10.0	0	True	AAAACA	-15
PB.5123.1	chr17	-	3589	5	novel_in_catalog	COX11	novel	2663	5	NA	NA	-23	2450	combination_of_known_junctions	FALSE	canonical	1	14684	junction_1	78696.67713561673	NA	2	NA	TRUE	NA	NA	NA	C	coding	231	696	32	727	15.0	-1	True	NA	NA
PB.5123.2	chr17	-	2914	5	novel_in_catalog	COX11	novel	2663	5	NA	NA	0	1798	combination_of_known_junctions	FALSE	canonical	1	14684	junction_1	78696.67713561673	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	9	704	30.0	-1	True	ATTAAA	-18
PB.5123.3	chr17	-	2403	5	novel_in_catalog	COX11	novel	2663	5	NA	NA	1	1289	combination_of_known_junctions	FALSE	canonical	1	14684	junction_1	78696.67713561673	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	7	702	15.0	1	True	NA	NA
PB.11799.3	chr9	+	2068	5	full-splice_match	ZNF79	ENST00000342483.5	2078	5	9	1	9	0	multi-exon	FALSE	canonical	1	15400	junction_1	22420.349399318024	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	398	1894	20.0	-49	True	AATAAA	-23
PB.11792.7	chr9	+	1865	9	full-splice_match	PBX3	ENST00000373489.9	2775	9	-58	968	6	419	multi-exon	FALSE	canonical	1	136738	junction_7	92548.83430080305	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	75	1379	25.0	-8316	False	AATAAA	-22
PB.8886.10	chr4	+	3152	13	novel_not_in_catalog	PDLIM5	novel	1960	10	NA	NA	0	-162	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	222870.0215583283	NA	4	1	TRUE	NA	NA	NA	C	coding	237	714	97	810	60.0	0	True	NA	NA
PB.1836.7	chr11	+	1609	5	full-splice_match	C11orf58	ENST00000228136.8	2049	5	243	197	0	-197	multi-exon	FALSE	canonical	1	926149	junction_1	483041.7676063324	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	136	687	15.0	-14	True	AAAAAG	-11
PB.11799.2	chr9	+	2201	6	novel_not_in_catalog	ZNF79	novel	2192	5	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	1	5749	junction_1	28650.334257037906	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	606	2030	20.0	-54	True	AATAAA	-20
PB.2823.27	chr12	+	2130	8	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	0	-31	intron_retention	FALSE	non_canonical	0	0	junction_7	253596.88960221567	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	239	1303	35.0	-2	True	AATAAA	-18
PB.2823.26	chr12	+	3248	4	full-splice_match	TMPO	ENST00000266732.8	3615	4	367	0	145	0	multi-exon	FALSE	canonical	1	325934	junction_3	139532.67883028532	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	778	1956	25.0	-2499	False	AATAAA	-21
PB.5196.10	chr17	-	3196	23	incomplete-splice_match	HELZ	ENST00000358691.9	13810	33	-2	65687	2	31401	3prime_fragment	FALSE	canonical	1	104757	junction_5	48650.30640218887	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3027	170	3196	55.0	-8	True	CATAAA	-13
PB.5196.11	chr17	-	3079	22	incomplete-splice_match	HELZ	ENST00000358691.9	13810	33	-9	67543	-5	29545	3prime_fragment	FALSE	canonical	1	104757	junction_4	49775.94901468906	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2901	177	3077	50.0	-15	True	NA	NA
PB.2823.23	chr12	+	2994	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	3	-69	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	248	1612	25.0	-11	True	AATAAA	-15
PB.9248.10	chr5	+	3277	30	full-splice_match	IPO11	ENST00000325324.10	4356	30	10	1069	10	-61	multi-exon	FALSE	canonical	1	117982	junction_1	62642.4956851362	NA	6	1	TRUE	NA	NA	NA	C	coding	975	2928	160	3087	50.0	0	True	GATAAA	-40
PB.5196.14	chr17	-	4471	12	incomplete-splice_match	HELZ	ENST00000417253.7	1872	14	-16	17671	-16	3021	3prime_fragment	FALSE	canonical	1	136439	junction_11	43430.188491569126	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	188	1360	15.0	-26	True	AATAAA	-14
PB.5196.15	chr17	-	2498	7	full-splice_match	HELZ	ENST00000584641.5	1101	7	-15	-1382	0	1382	multi-exon	FALSE	canonical	1	136439	junction_6	46341.833515254395	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	172	669	100.0	-10	True	NA	NA
PB.621.4	chr1	-	3114	5	full-splice_match	SLC16A1	ENST00000369626.7	3910	5	280	516	-10	-511	multi-exon	FALSE	canonical	1	712275	junction_4	230041.21876089944	NA	5	1	TRUE	NA	NA	NA	C	coding	500	1503	84	1586	35.0	272	False	AATAAA	-9
PB.1271.8	chr10	+	2624	22	full-splice_match	PFKP	ENST00000381125.8	2654	22	28	2	28	-2	multi-exon	FALSE	canonical	1	641055	junction_1	404006.27884952637	NA	1	NA	TRUE	NA	NA	NA	C	coding	784	2355	49	2403	20.0	0	True	ATTAAA	-18
PB.1271.9	chr10	+	2606	22	novel_not_in_catalog	PFKP	novel	432	4	NA	NA	28	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	514053.13869404775	NA	19	4	TRUE	NA	NA	NA	C	coding	778	2337	49	2385	20.0	0	True	ATTAAA	-18
PB.11792.2	chr9	+	2875	10	novel_not_in_catalog	PBX3	novel	2755	8	NA	NA	-639	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121924.51937020019	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	121	1425	25.0	-2	True	AATAAA	-18
PB.1271.2	chr10	+	2894	21	novel_in_catalog	PFKP	novel	432	4	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	641055	junction_1	409489.1577408491	NA	2	NA	TRUE	NA	NA	NA	C	coding	570	1713	962	2674	20.0	-38	True	ATTAAA	-17
PB.1271.3	chr10	+	2614	21	novel_in_catalog	PFKP	novel	432	4	NA	NA	-6	-1	no_combination_of_known_junctions	FALSE	canonical	1	10793	junction_5	513730.8188457745	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	83	2392	15.0	-34	True	ATTAAA	-19
PB.1271.1	chr10	+	4065	20	novel_in_catalog	PFKP	novel	432	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	641055	junction_1	396705.24949974346	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	2132	3844	20.0	-38	True	ATTAAA	-18
PB.1271.6	chr10	+	2159	14	incomplete-splice_match	PFKP	ENST00000381125.8	2654	22	23	19292	23	3994	3prime_fragment	FALSE	canonical	1	641055	junction_1	362970.1073573496	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	54	1499	15.0	-5	True	AATAAA	-13
PB.1271.7	chr10	+	3795	21	novel_in_catalog	PFKP	novel	432	4	NA	NA	28	-1	intron_retention	FALSE	canonical	1	641055	junction_1	392507.7706657889	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	1867	3573	15.0	0	True	ATTAAA	-19
PB.1271.4	chr10	+	2481	22	novel_in_catalog	PFKP	novel	432	4	NA	NA	7	17	combination_of_known_junctions	FALSE	canonical	1	11194	junction_21	477171.9853708011	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	70	2322	25.0	-21	True	AATAAA	-42
PB.1271.5	chr10	+	1838	3	incomplete-splice_match	PFKP	ENST00000381125.8	2654	22	12	35940	12	-692	3prime_fragment	FALSE	canonical	1	641055	junction_1	280351.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	65	367	100.0	-16	True	TTTAAA	-23
PB.9023.1	chr4	+	2024	5	novel_in_catalog	RPS3A	novel	934	6	NA	NA	-3	5	intron_retention	FALSE	canonical	1	6600	junction_3	87064.23820088245	NA	2	NA	TRUE	NA	NA	NA	C	coding	188	567	84	650	15.0	-1	True	AATAAA	-21
PB.11799.5	chr9	+	2174	5	full-splice_match	ZNF79	ENST00000612342.4	2192	5	18	0	10	0	multi-exon	FALSE	canonical	1	25043	junction_1	18860.588206628126	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	576	2000	20.0	-48	True	AATAAA	-23
PB.7761.1	chr22	+	2119	1	full-splice_match	H1F0	ENST00000340857.3	2344	1	136	89	136	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	194	585	317	901	30.0	0	True	AATAAA	-42
PB.11799.4	chr9	+	3099	5	full-splice_match	ZNF79	ENST00000612342.4	2192	5	18	-925	10	924	multi-exon	FALSE	canonical	1	25043	junction_1	18860.588206628126	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	576	2000	5.0	-48	True	NA	NA
PB.6534.1	chr2	-	2541	10	full-splice_match	C2orf42	ENST00000264434.6	2581	10	38	2	-16	-2	multi-exon	FALSE	canonical	1	14716	junction_9	26638.423588567523	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	343	2067	10.0	-30	True	AATAAA	-27
PB.11624.2	chr9	+	3280	3	full-splice_match	RMI1	ENST00000445877.5	1553	3	103	-1830	16	-11	multi-exon	TRUE	canonical	1	43250	junction_1	21523.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	625	1878	204	2081	55.0	-11	True	ATTAAA	-10
PB.337.1	chr1	+	3286	1	incomplete-splice_match	RIMKLA	ENST00000431473.3	8909	5	34188	4299	34188	-4299	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1105	False	AATATA	-16
PB.11624.3	chr9	+	3399	4	novel_not_in_catalog	RMI1	novel	1553	3	NA	NA	-27	-11	any annotated donor/acceptor	FALSE	canonical	1	9774	junction_2	35943.41554289032	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	323	2200	55.0	-54	True	ATTAAA	-10
PB.10656.3	chr7	+	3549	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	10	3972	-9	1593	multi-exon	FALSE	canonical	1	133354	junction_4	59149.77586966918	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	57	1220	20.0	-30	True	ATTAAA	-19
PB.9440.24	chr5	+	2448	2	novel_not_in_catalog	AC116366.3	novel	7893	27	NA	NA	171345	-21208	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7381.36	chr20	+	3156	8	novel_in_catalog	STX16	novel	4318	9	NA	NA	0	-1019	no_combination_of_known_junctions	FALSE	canonical	1	214	junction_1	270987.11623090657	NA	7	1	TRUE	NA	NA	NA	C	coding	272	819	148	966	65.0	0	True	NA	NA
PB.9440.21	chr5	+	1738	1	novel_in_catalog	AC116366.3	novel	7893	27	NA	NA	107328	-87362	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	1	True	NA	NA
PB.9440.20	chr5	+	2502	13	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	41	50585	41	-9	3prime_fragment	FALSE	canonical	1	187739	junction_1	79895.46790894268	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2154	347	2500	65.0	0	True	GATAAA	-24
PB.12367.1	chrX	-	3090	6	full-splice_match	CLIC2	ENST00000369449.6	2655	6	-32	-403	-21	403	multi-exon	FALSE	canonical	1	89678	junction_5	15029.900060878648	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	252	995	70.0	-1	True	NA	NA
PB.12367.3	chrX	-	1621	6	full-splice_match	CLIC2	ENST00000369449.6	2655	6	-1	1035	-1	734	multi-exon	FALSE	canonical	1	89678	junction_5	15029.900060878648	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	221	964	75.0	30	False	AATAAA	-11
PB.12367.2	chrX	-	2689	6	full-splice_match	CLIC2	ENST00000369449.6	2655	6	-32	-2	-21	2	multi-exon	FALSE	canonical	1	89678	junction_5	15029.900060878648	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	252	995	45.0	-1	True	AATAAA	-19
PB.11624.6	chr9	+	3493	4	novel_not_in_catalog	RMI1	novel	1553	3	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	2835	junction_1	37814.61317474444	NA	2	NA	TRUE	NA	NA	NA	C	coding	625	1878	410	2287	35.0	-28	True	ATTAAA	-17
PB.8763.4	chr4	-	1952	8	novel_not_in_catalog	GNPDA2	novel	570	2	NA	NA	-11	-3	any annotated donor/acceptor	TRUE	canonical	1	12198	junction_4	79926.87995350527	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	119	538	45.0	-1	True	AATAAA	-29
PB.6896.16	chr2	+	2436	12	novel_in_catalog	WDR75	novel	2701	21	NA	NA	44	0	intron_retention	FALSE	canonical	1	280498	junction_3	159875.7053226967	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	199	1038	60.0	NA	False	AATAAA	-23
PB.4392.3	chr16	+	2119	11	novel_in_catalog	BCKDK	novel	2164	13	NA	NA	-47	30	intron_retention	FALSE	canonical	1	406263	junction_1	176085.99966269324	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	849	1787	10.0	-2	True	NA	NA
PB.11624.4	chr9	+	1896	1	novel_in_catalog	RMI1	novel	1553	3	NA	NA	-26	-19566	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-53	True	NA	NA
PB.6654.8	chr2	-	3557	21	novel_not_in_catalog	REV1	novel	4686	23	NA	NA	-16	-13	any annotated donor/acceptor	FALSE	canonical	1	7048	junction_11	80822.93514999317	NA	0	NA	TRUE	NA	NA	NA	C	coding	1104	3312	246	3557	80.0	-52	True	NA	NA
PB.11624.5	chr9	+	2309	3	full-splice_match	RMI1	ENST00000325875.7	3420	3	-13	1124	-13	717	multi-exon	FALSE	canonical	1	19832	junction_1	33232.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	346	2223	65.0	-40	True	NA	NA
PB.8433.14	chr3	+	2491	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-57	-1133	0	1133	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	226	1161	15.0	-13	True	TATAAA	-16
PB.3216.1	chr13	-	3914	2	intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	28	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	126	381	2133	2513	65.0	1	True	AATAAA	-22
PB.6850.38	chr2	-	2640	5	incomplete-splice_match	WIPF1	ENST00000409891.5	2568	7	-39	4246	0	762	3prime_fragment	FALSE	canonical	1	269392	junction_4	159368.29147822192	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	243	1454	75.0	-1	True	NA	NA
PB.7111.19	chr2	-	4334	28	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	1	56549	junction_21	940462.5621930776	NA	0	NA	TRUE	NA	NA	NA	C	coding	1245	3738	211	3948	15.0	-35	False	AATAAA	-23
PB.6896.12	chr2	+	2469	21	full-splice_match	WDR75	ENST00000314761.8	2701	21	41	191	6	-172	multi-exon	FALSE	canonical	1	280498	junction_11	143739.66832207455	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2448	20	2467	55.0	0	True	AAAAAG	-8
PB.4510.1	chr16	+	4815	16	full-splice_match	CDH1	ENST00000261769.9	4889	16	67	7	0	0	multi-exon	TRUE	canonical	1	206417	junction_1	166439.64932105437	NA	2	NA	TRUE	NA	NA	NA	A	coding	882	2649	125	2773	20.0	0	True	ATTAAA	-18
PB.7668.2	chr22	-	2935	14	novel_in_catalog	HPS4	novel	471	4	NA	NA	7	-23	combination_of_known_junctions	FALSE	canonical	1	6547	junction_1	95451.10278978961	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	536	2503	85.0	30	False	NA	NA
PB.3661.12	chr14	+	1670	3	full-splice_match	EVL	ENST00000555848.1	1547	3	-124	1	-124	-1	multi-exon	FALSE	canonical	1	1354997	junction_2	196207.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-866	False	AATAAA	-15
PB.3661.11	chr14	+	2909	14	novel_not_in_catalog	EVL	novel	2353	14	NA	NA	-426	-1	intron_retention	FALSE	canonical	1	540	junction_1	483126.69601644174	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	107	1222	10.0	-4570	False	AATAAA	-15
PB.3661.10	chr14	+	2804	15	novel_in_catalog	EVL	novel	2353	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	15578	junction_14	478477.4483779198	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	79	1239	10.0	1	True	AATAAA	-16
PB.3690.1	chr14	+	2359	2	antisense	novelGene_AL132712.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1255	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	122	369	155	523	5.0	NA	False	AATAAA	-31
PB.7668.4	chr22	-	3746	16	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	3	590	any annotated donor/acceptor	FALSE	canonical	1	3691	junction_2	101335.03807456398	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	507	2633	45.0	-10	True	NA	NA
PB.7668.5	chr22	-	4472	14	full-splice_match	HPS4	ENST00000398145.6	4497	14	24	1	-5	-1	multi-exon	FALSE	canonical	1	54662	junction_6	83798.35278309332	NA	2	NA	TRUE	NA	NA	NA	C	coding	708	2127	594	2720	10.0	-6	True	AGTAAA	-14
PB.7668.8	chr22	-	3597	15	novel_in_catalog	HPS4	novel	471	4	NA	NA	1552	-1	combination_of_known_junctions	FALSE	canonical	1	19007	junction_9	105447.56495492661	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	1441	2772	10.0	10	True	AGTAAA	-14
PB.6896.11	chr2	+	2583	20	novel_not_in_catalog	WDR75	novel	2701	21	NA	NA	6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	180090.87582117753	NA	1	1	TRUE	NA	NA	NA	C	coding	608	1827	628	2454	60.0	0	True	AATAAA	-23
PB.7110.59	chr2	+	2520	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-2	-75	intron_retention	FALSE	canonical	1	25010	junction_5	1016204.946920991	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	1322	1906	35.0	-13	True	AATAAA	-16
PB.11307.23	chr8	-	1176	8	incomplete-splice_match	RAD21	ENST00000297338.6	3749	14	49	10231	49	1105	3prime_fragment	FALSE	canonical	1	430119	junction_7	429046.8573117174	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	936	240	1175	35.0	-42	True	NA	NA
PB.738.1	chr1	+	1450	2	full-splice_match	MLLT11	ENST00000368921.4	4075	2	2621	4	2621	-4	multi-exon	FALSE	canonical	1	648888	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-7827	False	AATAAA	-14
PB.6534.2	chr2	-	2764	10	novel_in_catalog	C2orf42	novel	2581	10	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	11629	junction_9	27479.605596303507	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	571	2295	25.0	24	False	AATAAA	-22
PB.11307.22	chr8	-	1853	12	novel_in_catalog	RAD21	novel	3749	14	NA	NA	-85	-3334	combination_of_known_junctions	FALSE	canonical	1	55919	junction_11	536961.2954256327	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1569	284	1852	65.0	306	False	NA	NA
PB.7744.19	chr22	-	3182	9	full-splice_match	FOXRED2	ENST00000216187.10	3933	9	-42	793	-21	-436	multi-exon	FALSE	canonical	1	10259	junction_8	60582.41649385055	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	155	2209	10.0	-1	True	NA	NA
PB.3496.7	chr14	+	3075	26	incomplete-splice_match	MTHFD1	ENST00000216605.12	3136	28	-23	4873	16	-42	3prime_fragment	FALSE	canonical	1	58134	junction_10	237632.27520570517	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	102	2870	30.0	-26	True	AATAAA	-19
PB.483.12	chr1	-	4265	14	novel_in_catalog	AC118549.1	novel	4500	11	NA	NA	-7	2	combination_of_known_junctions	TRUE	canonical	1	21350	junction_12	115601.35666199889	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	421	3129	20.0	-8	True	AATAAA	-29
PB.3496.6	chr14	+	3263	29	novel_not_in_catalog	MTHFD1	novel	6814	27	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	11	junction_23	276328.11726169236	NA	6	1	TRUE	NA	NA	NA	C	coding	968	2907	107	3013	25.0	-31	True	AATAAA	-17
PB.7744.11	chr22	-	3945	10	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	13	-4	any annotated donor/acceptor	FALSE	canonical	1	684	junction_1	74831.63711729366	NA	1	1	TRUE	NA	NA	NA	C	coding	684	2055	82	2136	30.0	-25	False	NA	NA
PB.7744.10	chr22	-	4006	10	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	3	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	77007.68501444483	NA	4	NA	TRUE	NA	NA	NA	C	coding	684	2055	131	2185	30.0	-1	True	NA	NA
PB.9554.4	chr5	+	2565	1	novel_in_catalog	PPARGC1B	novel	3004	11	NA	NA	1446	-83425	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.7744.12	chr22	-	3735	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	3	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	88186.07876875678	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	131	1915	30.0	-1	True	NA	NA
PB.7744.15	chr22	-	3934	9	full-splice_match	FOXRED2	ENST00000216187.10	3933	9	-16	15	5	-15	multi-exon	FALSE	canonical	1	10259	junction_8	60582.41649385055	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	129	2183	90.0	1	True	NA	NA
PB.3496.5	chr14	+	2345	17	incomplete-splice_match	MTHFD1	ENST00000216605.12	3136	28	-36	20275	3	353	3prime_fragment	FALSE	canonical	1	58134	junction_10	249280.54514580054	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	115	1833	70.0	-39	True	NA	NA
PB.7744.17	chr22	-	3568	10	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	11	-15	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	74980.74297288226	NA	6	1	TRUE	NA	NA	NA	C	coding	684	2055	84	2138	90.0	-27	False	NA	NA
PB.7744.16	chr22	-	3870	9	full-splice_match	FOXRED2	ENST00000397224.8	4967	9	30	1067	-28	-15	multi-exon	FALSE	canonical	1	20831	junction_8	57229.27764579398	NA	3	NA	TRUE	NA	NA	NA	C	coding	684	2055	65	2119	90.0	-8	True	NA	NA
PB.7561.4	chr21	+	1829	2	novel_not_in_catalog	ITGB2-AS1	novel	2282	4	NA	NA	6461	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	132	399	1109	1507	40.0	0	True	NA	NA
PB.8406.1	chr3	-	3481	20	novel_in_catalog	ACAD11	novel	3684	19	NA	NA	-40	-3	combination_of_known_junctions	FALSE	canonical	1	37268	junction_6	54422.93006799244	NA	2	NA	TRUE	NA	NA	NA	C	coding	597	1794	134	1927	20.0	1060	False	ATTAAA	-19
PB.7969.8	chr3	-	3374	24	novel_not_in_catalog	TBC1D5	novel	7854	22	NA	NA	-2	-18	any annotated donor/acceptor	FALSE	canonical	1	1486	junction_21	113628.62681721861	NA	1	NA	TRUE	NA	NA	NA	C	coding	824	2475	327	2801	85.0	5	True	AATAGA	-35
PB.3496.4	chr14	+	3081	27	full-splice_match	MTHFD1	ENST00000545908.5	6814	27	283	3450	3	3	multi-exon	FALSE	canonical	1	8100	junction_26	251584.9359797765	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	115	3009	25.0	-39	True	AATAAA	-20
PB.7561.1	chr21	+	2291	3	full-splice_match	ITGB2-AS1	ENST00000610063.5	478	3	-82	-1731	-57	-5	multi-exon	FALSE	canonical	1	3700	junction_2	2693.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	1370	1969	40.0	-7652	False	NA	NA
PB.7561.2	chr21	+	2330	5	full-splice_match	ITGB2-AS1	ENST00000609694.5	555	5	-3	-1772	-3	-4	multi-exon	FALSE	canonical	1	4723	junction_2	7698.821370833331	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	1408	2007	35.0	0	True	NA	NA
PB.7561.3	chr21	+	2254	4	full-splice_match	ITGB2-AS1	ENST00000441379.5	2282	4	22	6	0	-6	multi-exon	FALSE	canonical	1	8214	junction_2	7421.163385884992	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	1334	1933	40.0	3	True	NA	NA
PB.10639.10	chr7	-	2887	5	novel_not_in_catalog	SEMA3C	novel	5174	18	NA	NA	139	3433	any annotated donor/acceptor	FALSE	canonical	1	1365	junction_1	208952.6028677018	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	255	710	55.0	7	True	AATAAA	-12
PB.3496.2	chr14	+	4302	27	novel_in_catalog	MTHFD1	novel	6814	27	NA	NA	-1	5	intron_retention	FALSE	canonical	1	58134	junction_10	252354.92207431997	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	122	2086	30.0	-46	True	AATAAA	-22
PB.10797.6	chr7	+	2469	4	novel_not_in_catalog	TES	novel	2782	7	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_3	315020.43248053326	NA	1	1	TRUE	NA	NA	NA	C	coding	147	444	156	599	30.0	4	True	AATAAA	-15
PB.1943.9	chr11	-	2102	15	incomplete-splice_match	SSRP1	ENST00000278412.6	2819	17	-2	1479	-2	-592	3prime_fragment	FALSE	canonical	1	431324	junction_14	595146.7016326559	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1833	270	2102	40.0	-12	True	AAAAAG	-6
PB.3496.1	chr14	+	3073	27	novel_in_catalog	MTHFD1	novel	6814	27	NA	NA	-2	1	no_combination_of_known_junctions	TRUE	canonical	1	14485	junction_24	269224.91588317335	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	123	2822	25.0	-47	True	AATAAA	-18
PB.8406.5	chr3	-	3681	21	novel_not_in_catalog	ACAD11	novel	3684	19	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	80263.42568061434	NA	10	2	TRUE	NA	NA	NA	C	coding	451	1356	350	1705	25.0	3	True	ATTAAA	-15
PB.10797.4	chr7	+	1508	7	full-splice_match	TES	ENST00000358204.8	2782	7	46	1228	0	-21	multi-exon	FALSE	canonical	1	545445	junction_4	158701.49541137146	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	170	1435	80.0	-10	True	NA	NA
PB.8406.4	chr3	-	3428	21	novel_not_in_catalog	ACAD11	novel	3684	19	NA	NA	-61	2	any annotated donor/acceptor	FALSE	canonical	1	4021	junction_6	66528.85272937975	NA	1	NA	TRUE	NA	NA	NA	C	coding	814	2445	155	2599	25.0	1039	False	ATTAAA	-18
PB.5014.9	chr17	+	3743	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-1	320	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	208588.41741559232	NA	6	1	TRUE	NA	NA	NA	B	coding	842	2529	448	2976	55.0	10	True	AATATA	-32
PB.5014.8	chr17	+	4446	18	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	242366.69385002635	NA	7	1	TRUE	NA	NA	NA	B	coding	842	2529	305	2833	15.0	-12	True	AATAAA	-18
PB.379.19	chr1	-	3338	11	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	2	-184	no_combination_of_known_junctions	FALSE	canonical	1	7347	junction_6	294867.0532060169	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	1916	2572	25.0	-8	True	AATAAA	-18
PB.8406.7	chr3	-	3954	19	full-splice_match	ACAD11	ENST00000496418.5	3684	19	-654	384	-221	-50	multi-exon	FALSE	canonical	1	115057	junction_6	42302.053659396595	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	553	2244	80.0	641	False	NA	NA
PB.11552.1	chr9	+	3037	4	incomplete-splice_match	AL390726.6	ENST00000637760.1	1654	6	3995	-1794	3993	1794	5prime_fragment	FALSE	canonical	1	6220	junction_2	268.46021844751766	NA	2	NA	TRUE	NA	NA	NA	A	coding	128	387	297	683	25.0	4	True	NA	NA
PB.5014.3	chr17	+	4835	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-73	-213	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	236447.26798061532	NA	6	1	TRUE	NA	NA	NA	B	coding	897	2694	740	3433	25.0	-1	True	AATAAA	-24
PB.5014.2	chr17	+	3476	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-81	116	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	236447.26798061532	NA	7	1	TRUE	NA	NA	NA	B	coding	897	2694	748	3441	25.0	-5362	False	ATTAAA	-17
PB.5014.1	chr17	+	4397	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-82	-215	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	241241.05141879368	NA	6	1	TRUE	NA	NA	NA	B	coding	842	2529	469	2997	20.0	-5363	False	AATAAA	-22
PB.379.16	chr1	-	3397	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	23	-183	combination_of_known_junctions	FALSE	canonical	1	24395	junction_11	228949.86950465458	NA	3	NA	TRUE	NA	NA	NA	C	coding	474	1425	1206	2630	30.0	19	False	AATAAA	-19
PB.5014.7	chr17	+	4227	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-6	-220	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	248507.56175511485	NA	6	1	TRUE	NA	NA	NA	B	coding	736	2211	311	2521	25.0	-18	True	AATAAA	-17
PB.5014.6	chr17	+	4192	18	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-9	-220	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	251612.98433017387	NA	6	1	TRUE	NA	NA	NA	B	coding	827	2484	314	2797	25.0	-21	True	AATAAA	-17
PB.5014.5	chr17	+	4531	21	novel_in_catalog	NBR1	novel	4656	21	NA	NA	224	-220	combination_of_known_junctions	FALSE	canonical	1	18439	junction_4	260184.86908237002	NA	0	NA	TRUE	NA	NA	NA	B	coding	966	2901	236	3136	25.0	-5044	False	AATAAA	-17
PB.5014.4	chr17	+	4180	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	-53	320	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	236447.26798061532	NA	6	1	TRUE	NA	NA	NA	B	coding	897	2694	720	3413	55.0	19	True	AATATA	-32
PB.534.10	chr1	+	2884	12	full-splice_match	CDC7	ENST00000234626.10	3173	12	-38	327	-38	-327	multi-exon	FALSE	canonical	1	81588	junction_1	33331.668466246956	NA	10	2	TRUE	NA	NA	NA	C	coding	574	1725	158	1882	60.0	-13	True	AATGAA	-7
PB.8406.9	chr3	-	2975	21	novel_not_in_catalog	ACAD11	novel	3684	19	NA	NA	12	-50	any annotated donor/acceptor	FALSE	canonical	1	4021	junction_6	66528.85272937975	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	82	2526	80.0	24	True	NA	NA
PB.534.12	chr1	+	4189	7	incomplete-splice_match	CDC7	ENST00000234626.10	3173	12	-8	9217	-8	-3733	intron_retention	FALSE	canonical	1	81588	junction_1	41576.43101733107	NA	2	1	TRUE	NA	NA	NA	C	coding	302	909	128	1036	30.0	17	True	NA	NA
PB.534.13	chr1	+	3337	12	full-splice_match	CDC7	ENST00000428239.5	3313	12	-15	-9	-15	9	multi-exon	FALSE	canonical	1	12286	junction_1	49611.56903834307	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	275	1999	40.0	-3030	False	AATAAA	-31
PB.9719.13	chr6	-	3069	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	5	6595	-4	-168	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	83	943	15.0	-4	True	TTTAAA	-30
PB.8541.12	chr3	+	3680	16	full-splice_match	FXR1	ENST00000445140.6	2651	16	-3	-1026	-2	1026	multi-exon	FALSE	canonical	1	306156	junction_5	374887.157266942	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	18	1637	80.0	-2	True	NA	NA
PB.10797.1	chr7	+	3612	6	novel_in_catalog	TES	novel	2782	7	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	545445	junction_3	173189.52437996934	NA	5	NA	TRUE	NA	NA	NA	C	coding	295	888	1427	2314	30.0	-1	True	AATAAA	-14
PB.8541.11	chr3	+	1836	17	full-splice_match	FXR1	ENST00000357559.8	8711	17	365	6510	-4	-39	multi-exon	FALSE	canonical	1	306156	junction_5	356383.18437050114	NA	2	1	TRUE	NA	NA	NA	C	coding	605	1815	20	1834	65.0	-4	True	AAGAAA	-14
PB.8541.10	chr3	+	2840	16	novel_in_catalog	FXR1	novel	570	5	NA	NA	-4	5	intron_retention	FALSE	canonical	1	306156	junction_5	347283.794675613	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	20	1972	25.0	-4	True	AATAAA	-21
PB.12189.3	chrX	-	2576	2	full-splice_match	ARMCX6	ENST00000494624.1	753	2	-86	-1737	0	1	multi-exon	FALSE	canonical	1	561945	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	1081	1983	30.0	-25	True	AATAAA	-21
PB.12189.2	chrX	-	1830	3	full-splice_match	ARMCX6	ENST00000361910.8	1846	3	12	4	11	2	multi-exon	FALSE	canonical	1	546583	junction_1	7681.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	334	1236	30.0	-14	True	AATAAA	-22
PB.12189.1	chrX	-	2897	1	genic	ARMCX6	novel	NA	NA	NA	NA	-19	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	300	903	1401	2303	30.0	-45	False	AATAAA	-22
PB.1798.1	chr11	-	1699	2	novel_not_in_catalog	AC107884.1	novel	473	2	NA	NA	-1129	-38320	any annotated donor/acceptor	FALSE	canonical	1	3213	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	19	60	376	435	20.0	-3	True	NA	NA
PB.12006.1	chrX	+	2622	12	full-splice_match	EIF2S3	ENST00000253039.8	2858	12	234	2	4	-2	multi-exon	FALSE	canonical	1	336	junction_7	331168.46581907326	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	20	1438	25.0	-6	True	AGTAAA	-15
PB.9420.15	chr5	+	2941	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	24	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	3	NA	TRUE	NA	NA	NA	C	coding	394	1185	15	1199	35.0	2	True	AATAAA	-21
PB.12006.3	chrX	+	2125	12	full-splice_match	EIF2S3	ENST00000253039.8	2858	12	231	502	1	61	multi-exon	FALSE	canonical	1	336	junction_7	331168.46581907326	NA	14	2	TRUE	NA	NA	NA	C	coding	472	1419	23	1441	15.0	-9	True	AATAAA	-19
PB.12006.2	chrX	+	3464	12	full-splice_match	EIF2S3	ENST00000253039.8	2858	12	231	-837	1	837	multi-exon	FALSE	canonical	1	336	junction_7	331168.46581907326	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	23	1441	35.0	-9	True	AATAAA	-19
PB.12006.5	chrX	+	2504	13	novel_not_in_catalog	EIF2S3	novel	2858	12	NA	NA	1	61	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	338759.28751240124	NA	11	NA	TRUE	NA	NA	NA	C	coding	452	1359	23	1381	15.0	-9	True	AATAAA	-19
PB.12006.4	chrX	+	1739	12	full-splice_match	EIF2S3	ENST00000253039.8	2858	12	221	898	-9	-335	multi-exon	FALSE	canonical	1	336	junction_7	331168.46581907326	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	33	1451	5.0	-19	True	NA	NA
PB.12006.7	chrX	+	3826	13	novel_not_in_catalog	EIF2S3	novel	2858	12	NA	NA	-9	836	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	338759.28751240124	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	8	1366	35.0	6	True	AATAAA	-18
PB.12006.6	chrX	+	2034	12	novel_not_in_catalog	EIF2S3	novel	2858	12	NA	NA	10	61	any annotated donor/acceptor	FALSE	canonical	1	336	junction_7	334410.86129090114	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	14	1291	15.0	0	True	AATAAA	-19
PB.7043.24	chr2	-	2248	11	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	196	junction_9	857066.6554807741	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	350	1543	45.0	-3	True	AATAAA	-15
PB.7043.25	chr2	-	2239	9	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-9	any annotated donor/acceptor	FALSE	canonical	1	2311	junction_5	688499.5455194465	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	211	957	45.0	-1	True	AATAAA	-15
PB.436.2	chr1	-	1695	6	full-splice_match	PLPP3	ENST00000371250.3	3292	6	-90	1687	-90	0	multi-exon	FALSE	canonical	1	428568	junction_5	90079.69266466222	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	643	1578	75.0	-1	True	NA	NA
PB.8433.17	chr3	+	2587	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	-5	1132	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	794	1258	15.0	-7	True	TATAAA	-15
PB.29.1	chr1	-	3602	7	novel_not_in_catalog	AL031282.2	novel	5079	20	NA	NA	-8094	-24650	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	24228.534988039755	NA	3	1	TRUE	NA	NA	NA	B	coding	266	801	207	1007	5.0	287	False	AATAAA	-13
PB.11085.5	chr8	+	4179	12	novel_in_catalog	ERLIN2	novel	550	3	NA	NA	-8	-877	combination_of_known_junctions	FALSE	canonical	1	45768	junction_1	114100.71924668823	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	351	1370	30.0	0	True	ATTAAA	-18
PB.9018.4	chr4	+	2625	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	53	1500	50	693	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	4	NA	TRUE	NA	NA	NA	C	coding	438	1317	522	1838	15.0	-120	False	AATAAA	-18
PB.11734.4	chr9	+	3266	5	full-splice_match	SLC31A1	ENST00000374212.4	4744	5	-18	1496	-18	-1496	multi-exon	FALSE	canonical	1	119935	junction_4	61334.579604412385	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	171	743	65.0	-44	True	NA	NA
PB.11177.4	chr8	-	2647	11	novel_not_in_catalog	TRAM1	novel	3394	11	NA	NA	54	4	intron_retention	FALSE	non_canonical	0	0	junction_3	714246.0508431321	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	87	824	15.0	64	True	AATAAA	-22
PB.5510.8	chr18	-	2276	11	full-splice_match	VPS4B	ENST00000238497.9	3324	11	-15	1063	5	610	multi-exon	FALSE	canonical	1	390326	junction_2	56775.79474388712	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	220	1554	55.0	-32	True	NA	NA
PB.5510.9	chr18	-	1913	11	full-splice_match	VPS4B	ENST00000238497.9	3324	11	7	1404	7	269	multi-exon	FALSE	canonical	1	390326	junction_2	56775.79474388712	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	198	1532	60.0	-10	True	ACTAAA	-28
PB.11177.1	chr8	-	3835	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	20	-1070	3	1070	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	151	1275	10.0	0	True	NA	NA
PB.11177.3	chr8	-	2769	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	20	-4	3	4	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	17	2	TRUE	NA	NA	NA	C	coding	374	1125	151	1275	15.0	0	True	AATAAA	-22
PB.11177.2	chr8	-	2867	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	67	-149	37	149	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	104	1228	35.0	47	True	NA	NA
PB.5510.2	chr18	-	3268	12	novel_not_in_catalog	VPS4B	novel	3324	11	NA	NA	16	-107	any annotated donor/acceptor	FALSE	canonical	1	5563	junction_2	184872.510612669	NA	3	NA	TRUE	NA	NA	NA	C	coding	418	1257	189	1445	20.0	-1	True	AGTAAA	-22
PB.5510.3	chr18	-	3134	11	full-splice_match	VPS4B	ENST00000238497.9	3324	11	38	152	-35	-152	multi-exon	FALSE	canonical	1	390326	junction_2	56775.79474388712	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	167	1501	30.0	-9	True	ATTAAA	-14
PB.5510.1	chr18	-	3335	11	full-splice_match	VPS4B	ENST00000238497.9	3324	11	-26	15	-6	-15	multi-exon	TRUE	canonical	1	390326	junction_2	56775.79474388712	NA	2	NA	TRUE	NA	NA	NA	C	coding	444	1335	231	1565	40.0	26	False	ATTAAA	-8
PB.5510.6	chr18	-	2934	11	full-splice_match	VPS4B	ENST00000238497.9	3324	11	-18	408	2	-408	multi-exon	FALSE	canonical	1	390326	junction_2	56775.79474388712	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	223	1557	50.0	34	False	AATAAA	-22
PB.5510.7	chr18	-	2466	11	full-splice_match	VPS4B	ENST00000238497.9	3324	11	-11	869	9	804	multi-exon	FALSE	canonical	1	390326	junction_2	56775.79474388712	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	216	1550	75.0	-28	True	NA	NA
PB.5510.4	chr18	-	2783	8	novel_in_catalog	VPS4B	novel	3324	11	NA	NA	2	-116	no_combination_of_known_junctions	FALSE	canonical	1	2713	junction_1	175216.00802193518	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	223	1038	20.0	34	False	AGTAAA	-13
PB.6872.3	chr2	-	2865	4	full-splice_match	FKBP7	ENST00000424785.6	2834	4	-33	2	4	-2	multi-exon	FALSE	canonical	1	116778	junction_2	25822.131984447416	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	93	761	40.0	-24	True	AATAAA	-21
PB.9910.2	chr6	-	4480	1	novel_in_catalog	AL645941.2	novel	612	4	NA	NA	26	-11253	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	153	462	3135	3596	10.0	-46	True	AATAAA	-15
PB.12034.1	chrX	+	1905	3	novel_in_catalog	GPR34	novel	1928	3	NA	NA	9	-7	intron_retention	FALSE	canonical	1	3188	junction_1	15826.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	374	1125	294	1418	50.0	1	True	AATAAA	-10
PB.2416.1	chr12	-	3335	1	genic	AC006064.3	novel	NA	NA	NA	NA	-46	2080	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	4824	False	NA	NA
PB.7420.2	chr20	+	4635	35	full-splice_match	RTEL1	ENST00000360203.10	4630	35	0	-5	0	-1	multi-exon	FALSE	canonical	1	44022	junction_12	54044.38648134817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1300	3903	344	4246	5.0	-21	True	AATAAA	-20
PB.9910.5	chr6	-	3795	3	novel_not_in_catalog	AL645941.2	novel	612	4	NA	NA	71	-11256	intron_retention	FALSE	canonical	1	11647	junction_2	611553.0	NA	6	NA	TRUE	NA	NA	NA	B	coding	153	462	3090	3551	15.0	-1	True	AATAAA	-12
PB.7110.52	chr2	+	3469	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	39000	junction_1	1079769.9434276167	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	296	1381	20.0	-21	True	AATAAA	-21
PB.8808.1	chr4	+	1517	5	novel_not_in_catalog	HTN3	novel	578	6	NA	NA	0	748	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	412215.2857533912	NA	2	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.11101.5	chr8	+	3841	22	novel_not_in_catalog	ADAM9	novel	2053	5	NA	NA	-51	0	any annotated donor/acceptor	FALSE	canonical	1	1585	junction_5	307753.8553429788	NA	3	2	TRUE	NA	NA	NA	C	coding	623	1872	669	2540	10.0	-38	True	NA	NA
PB.10947.8	chr7	+	6816	18	novel_in_catalog	RBM33	novel	1404	6	NA	NA	-17	2636	combination_of_known_junctions	FALSE	canonical	1	51758	junction_14	96955.3940707006	NA	1	NA	TRUE	NA	NA	NA	C	coding	1181	3546	216	3761	20.0	1	True	AGTAAA	-20
PB.9189.1	chr5	+	1750	2	novel_not_in_catalog	LINC02107	novel	462	3	NA	NA	122627	-31192	any annotated donor/acceptor	FALSE	canonical	1	75	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-167	False	ACTAAA	-40
PB.10947.7	chr7	+	6550	18	novel_in_catalog	RBM33	novel	1404	6	NA	NA	-18	2369	combination_of_known_junctions	FALSE	canonical	1	51758	junction_14	96955.3940707006	NA	0	NA	TRUE	NA	NA	NA	C	coding	1181	3546	217	3762	20.0	0	True	TATAAA	-20
PB.10947.6	chr7	+	6637	19	novel_in_catalog	RBM33	novel	1404	6	NA	NA	-18	2369	combination_of_known_junctions	FALSE	canonical	1	18841	junction_6	105734.46496621314	NA	19	1	TRUE	NA	NA	NA	C	coding	1210	3633	217	3849	20.0	0	True	TATAAA	-20
PB.10767.15	chr7	+	6843	27	full-splice_match	KMT2E	ENST00000311117.7	6874	27	30	1	1	0	multi-exon	FALSE	canonical	1	94944	junction_2	117554.59767546538	NA	1	NA	TRUE	NA	NA	NA	C	coding	1858	5577	516	6092	30.0	4	True	AATAAA	-20
PB.10612.1	chr7	-	2315	11	full-splice_match	RCC1L	ENST00000610322.4	2300	11	-10	-5	-10	5	multi-exon	FALSE	canonical	1	2459	junction_5	248109.0656393676	NA	0	NA	TRUE	NA	NA	NA	A	coding	464	1395	67	1461	35.0	-14	True	AATAAA	-33
PB.9922.1	chr6	-	2229	14	novel_in_catalog	WDR46	novel	872	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	540542	junction_13	95600.69248393697	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	78	1538	20.0	-22	True	ATTAAA	-21
PB.11142.1	chr8	+	2324	4	full-splice_match	FAM110B	ENST00000519262.5	578	4	-45	-1701	-45	-1088	multi-exon	FALSE	canonical	1	28936	junction_1	17652.131448260483	NA	3	NA	TRUE	NA	NA	NA	C	coding	370	1113	855	1967	35.0	-16	True	ATTAAA	-17
PB.1886.42	chr11	+	2629	7	full-splice_match	CAPRIN1	ENST00000533657.5	2774	7	151	-6	151	1	multi-exon	FALSE	canonical	1	1775760	junction_6	282120.87742397265	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	255	839	10.0	-10010	False	AATAAA	-23
PB.10767.12	chr7	+	2075	15	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	-1	-15	intron_retention	FALSE	canonical	1	5852	junction_6	200078.99187657592	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1029	1047	2075	80.0	0	True	NA	NA
PB.8086.5	chr3	-	1252	5	novel_in_catalog	NME6	novel	4776	5	NA	NA	1	16	combination_of_known_junctions	FALSE	canonical	1	43121	junction_2	98427.63996808772	NA	3	1	TRUE	NA	NA	NA	C	coding	171	516	50	565	30.0	5	True	AATAAA	-35
PB.3664.1	chr14	+	1993	7	full-splice_match	WDR25	ENST00000554998.5	1952	7	-11	-30	4	-2	multi-exon	FALSE	canonical	1	5913	junction_1	45985.938389420255	NA	0	NA	TRUE	NA	NA	NA	A	coding	536	1611	123	1733	35.0	-63	True	NA	NA
PB.9922.3	chr6	-	2061	15	full-splice_match	WDR46	ENST00000374617.8	2358	15	296	1	16	-1	multi-exon	FALSE	canonical	1	517121	junction_4	99488.2788342836	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	62	1894	25.0	-6	True	ATTAAA	-20
PB.9922.2	chr6	-	2190	14	novel_in_catalog	WDR46	novel	872	4	NA	NA	9	-1	intron_retention	FALSE	canonical	1	517121	junction_3	100724.97068839242	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2121	69	2189	25.0	-13	True	ATTAAA	-20
PB.2349.3	chr11	-	2597	1	novel_in_catalog	TMEM218	novel	1828	5	NA	NA	-2	-6718	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	6	True	NA	NA
PB.2349.2	chr11	-	2379	3	novel_in_catalog	TMEM218	novel	1828	5	NA	NA	0	-14	intron_retention	FALSE	canonical	1	131745	junction_2	67581.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	9	True	AATAAA	-3
PB.2349.1	chr11	-	3107	5	novel_in_catalog	TMEM218	novel	1828	5	NA	NA	-2	1511	combination_of_known_junctions	FALSE	canonical	1	33400	junction_4	86829.82822848091	NA	1	NA	TRUE	NA	NA	NA	B	coding	115	348	188	535	25.0	6	True	AGTAAA	-3
PB.11997.7	chrX	-	1210	7	full-splice_match	EIF1AX	ENST00000379607.9	4427	7	-7	3224	-7	336	multi-exon	FALSE	canonical	1	152	junction_1	73303.13811381701	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	212	646	85.0	-17	True	NA	NA
PB.11997.6	chrX	-	1752	7	full-splice_match	EIF1AX	ENST00000379607.9	4427	7	-27	2702	-27	858	multi-exon	FALSE	canonical	1	152	junction_1	73303.13811381701	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	232	666	30.0	-37	False	AATAAA	-35
PB.11997.5	chrX	-	1946	7	full-splice_match	EIF1AX	ENST00000379607.9	4427	7	-7	2488	-7	1072	multi-exon	FALSE	canonical	1	152	junction_1	73303.13811381701	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	212	646	20.0	-17	True	ATTAAA	-18
PB.11997.4	chrX	-	2825	7	full-splice_match	EIF1AX	ENST00000379607.9	4427	7	-2	1604	-2	-1604	multi-exon	FALSE	canonical	1	152	junction_1	73303.13811381701	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	207	641	35.0	-12	True	AATAAA	-14
PB.11997.3	chrX	-	2875	7	full-splice_match	EIF1AX	ENST00000379607.9	4427	7	99	1453	81	-1453	multi-exon	FALSE	canonical	1	152	junction_1	73303.13811381701	NA	3	1	TRUE	NA	NA	NA	C	coding	144	435	106	540	80.0	89	False	NA	NA
PB.11997.1	chrX	-	4429	7	full-splice_match	EIF1AX	ENST00000379607.9	4427	7	-3	1	-3	-1	multi-exon	FALSE	canonical	1	152	junction_1	73303.13811381701	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	208	642	30.0	-13	True	AATAAA	-24
PB.9581.8	chr5	+	3843	1	novel_in_catalog	MFAP3	novel	643	3	NA	NA	-2	-6939	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	19	True	AATATA	-11
PB.880.2	chr1	+	4648	5	incomplete-splice_match	FCGR2C	ENST00000466542.6	1070	7	6	3765	0	-205	intron_retention	FALSE	canonical	1	182	junction_1	1641.1403619130206	NA	1	NA	TRUE	NA	NA	NA	A	coding	104	315	2123	2437	15.0	NA	False	NA	NA
PB.9581.9	chr5	+	3054	3	full-splice_match	MFAP3	ENST00000522782.5	643	3	85	-2496	-2	458	multi-exon	FALSE	canonical	1	39415	junction_1	68477.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	188	1276	25.0	19	True	AATAAA	-21
PB.7245.1	chr20	+	1604	5	full-splice_match	CHMP4B	ENST00000217402.2	1646	5	41	1	41	-1	multi-exon	FALSE	canonical	1	763298	junction_2	554679.5801417697	NA	0	NA	TRUE	NA	NA	NA	A	coding	224	675	125	799	15.0	-5	True	ATTAAA	-20
PB.1819.46	chr11	-	1729	7	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-263	-1	intron_retention	FALSE	canonical	1	1162	junction_6	2697176.5497079636	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	99	968	15.0	8180	False	AATAAA	-15
PB.2603.4	chr12	+	4494	12	novel_in_catalog	SMARCD1	novel	3658	13	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	325983	junction_5	148357.7773321157	NA	3	NA	TRUE	NA	NA	NA	C	coding	229	690	2165	2854	20.0	-922	False	AATAAA	-12
PB.2603.5	chr12	+	3001	12	incomplete-splice_match	SMARCD1	ENST00000394963.8	3658	13	1198	73	487	-3	5prime_fragment	FALSE	canonical	1	325983	junction_4	149362.60280519954	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	1	1362	20.0	-62	False	AATAAA	-11
PB.2603.7	chr12	+	2649	7	novel_in_catalog	SMARCD1	novel	3658	13	NA	NA	2075	819	intron_retention	FALSE	canonical	1	22397	junction_6	271129.3314634283	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	112	606	15.0	-9978	False	NA	NA
PB.2603.1	chr12	+	3158	12	novel_in_catalog	SMARCD1	novel	3658	13	NA	NA	1	-6	intron_retention	FALSE	canonical	1	84414	junction_4	195098.50257665454	NA	8	1	TRUE	NA	NA	NA	C	coding	474	1425	28	1452	15.0	1	True	NA	NA
PB.2603.2	chr12	+	3224	12	full-splice_match	SMARCD1	ENST00000381513.8	3237	12	11	2	11	-2	multi-exon	FALSE	canonical	1	35208	junction_10	216985.07431591765	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	160	1584	20.0	-25	True	AATAAA	-12
PB.2603.3	chr12	+	3224	13	full-splice_match	SMARCD1	ENST00000394963.8	3658	13	362	72	6	-2	multi-exon	FALSE	canonical	1	325983	junction_5	146245.90775442802	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	37	1584	20.0	-8	True	AATAAA	-12
PB.11696.5	chr9	+	5358	25	novel_not_in_catalog	SMC2	novel	5992	25	NA	NA	-10	-592	any annotated donor/acceptor	FALSE	canonical	1	60129	junction_1	66972.65083618867	NA	0	NA	TRUE	NA	NA	NA	C	coding	1197	3594	263	3856	25.0	-35	True	ATTAAA	-22
PB.8433.16	chr3	+	1864	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-52	-511	5	511	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	221	1156	5.0	-8	True	AGTAAA	-29
PB.11987.1	chrX	+	2093	10	full-splice_match	TXLNG	ENST00000380122.9	4401	10	-36	2344	-36	-2342	multi-exon	FALSE	canonical	1	106821	junction_1	44531.73144102756	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	98	1684	60.0	-75	False	TTTAAA	-34
PB.11987.2	chrX	+	4408	10	full-splice_match	TXLNG	ENST00000380122.9	4401	10	-10	3	-10	-1	multi-exon	FALSE	canonical	1	106821	junction_1	44531.73144102756	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	72	1658	20.0	-49	False	AGTAAA	-16
PB.11987.3	chrX	+	3064	10	full-splice_match	TXLNG	ENST00000380122.9	4401	10	39	1298	34	-1296	multi-exon	FALSE	canonical	1	106821	junction_1	44531.73144102756	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	23	1609	20.0	0	True	AATAAA	-18
PB.5197.9	chr17	-	2609	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	33	1764	-7	123	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	76	1446	65.0	-18	True	AATAAA	-21
PB.5197.8	chr17	-	2880	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	37	1489	-3	398	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	4	NA	TRUE	NA	NA	NA	C	coding	456	1371	72	1442	35.0	-14	True	TTTAAA	-8
PB.4631.3	chr16	+	3618	13	full-splice_match	DEF8	ENST00000563594.5	4450	13	831	1	1	0	multi-exon	FALSE	canonical	1	49237	junction_6	152768.0844468358	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	167	1522	5.0	-23	True	ATTAAA	-13
PB.4631.2	chr16	+	3585	13	full-splice_match	DEF8	ENST00000563795.1	1767	13	-65	-1753	7	0	multi-exon	FALSE	canonical	1	48949	junction_10	153542.50933126974	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	185	1489	5.0	-41	True	ATTAAA	-13
PB.5197.5	chr17	-	3686	12	novel_not_in_catalog	PSMD12	novel	4406	11	NA	NA	2	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	198671.2134485201	NA	13	1	TRUE	NA	NA	NA	C	coding	456	1371	85	1455	30.0	-27	True	AATAAA	-11
PB.5197.4	chr17	-	3564	12	novel_not_in_catalog	PSMD12	novel	4406	11	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	198671.2134485201	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	76	1446	15.0	-18	True	AATAAA	-19
PB.5197.7	chr17	-	2982	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	49	1375	-1	512	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	60	1430	70.0	-2	True	NA	NA
PB.5197.6	chr17	-	3298	11	full-splice_match	PSMD12	ENST00000356126.7	4406	11	51	1057	1	830	multi-exon	FALSE	canonical	1	172815	junction_1	172808.09830734206	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	58	1428	35.0	0	True	AATAAA	-29
PB.5197.1	chr17	-	3630	12	novel_not_in_catalog	PSMD12	novel	4406	11	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	198671.2134485201	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	84	1454	10.0	-26	True	AATAAA	-20
PB.5197.3	chr17	-	3943	12	novel_not_in_catalog	PSMD12	novel	4406	11	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	198671.2134485201	NA	6	1	TRUE	NA	NA	NA	C	coding	456	1371	61	1431	15.0	-3	True	AATAAA	-19
PB.5197.2	chr17	-	3583	12	novel_not_in_catalog	PSMD12	novel	4406	11	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	198671.2134485201	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	75	1445	10.0	-17	True	AATAAA	-20
PB.3598.8	chr14	-	4557	9	full-splice_match	GTF2A1	ENST00000553612.5	6306	9	-39	1788	-9	-1788	multi-exon	FALSE	canonical	1	208510	junction_1	22675.72992451125	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	444	1574	25.0	-3	True	ATTAAA	-23
PB.3598.9	chr14	-	2538	9	full-splice_match	GTF2A1	ENST00000553612.5	6306	9	50	3718	50	1008	multi-exon	FALSE	canonical	1	208510	junction_1	22675.72992451125	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	355	1485	35.0	0	True	AGTAAA	-15
PB.7037.25	chr2	+	2064	14	incomplete-splice_match	ACSL3	ENST00000357430.7	5679	17	87	13939	-5	-3023	3prime_fragment	FALSE	canonical	1	231016	junction_3	258435.66157084846	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1587	478	2064	75.0	-15	True	NA	NA
PB.5770.1	chr19	+	4488	1	full-splice_match	IER2	ENST00000588173.1	2934	1	-1561	7	-1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	223	672	2774	3445	30.0	-31	True	AATAAA	-12
PB.7037.23	chr2	+	4357	17	full-splice_match	ACSL3	ENST00000357430.7	5679	17	83	1239	-9	1178	multi-exon	FALSE	canonical	1	231016	junction_3	274418.0201148138	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	482	2611	20.0	-19	True	ATTAAA	-16
PB.7037.22	chr2	+	3118	16	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-11	-4	no_combination_of_known_junctions	FALSE	canonical	1	9534	junction_1	313627.2601518064	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	425	2554	35.0	-21	True	AATAAA	-22
PB.7037.21	chr2	+	3161	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-11	4	any annotated donor/acceptor	FALSE	canonical	1	16744	junction_5	332624.6354749917	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	484	2589	30.0	-21	True	AATAAA	-30
PB.7037.20	chr2	+	3978	16	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-11	856	no_combination_of_known_junctions	FALSE	canonical	1	9534	junction_1	313627.2601518064	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	425	2554	90.0	-21	True	NA	NA
PB.6851.31	chr2	-	2148	14	full-splice_match	ATF2	ENST00000264110.6	4176	14	-2	2030	-2	0	multi-exon	FALSE	canonical	1	239115	junction_9	79357.56893942965	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	302	1819	20.0	-9	True	AATAAA	-15
PB.6513.1	chr2	-	3972	6	full-splice_match	SPRED2	ENST00000356388.8	4097	6	124	1	124	-1	multi-exon	FALSE	canonical	1	153189	junction_4	24102.27118426809	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	67	1323	10.0	925	False	TATAAA	-14
PB.3598.2	chr14	-	6342	9	full-splice_match	GTF2A1	ENST00000553612.5	6306	9	-39	3	-9	-3	multi-exon	FALSE	canonical	1	208510	junction_1	22675.72992451125	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	444	1574	25.0	-3	True	AATAAA	-22
PB.6851.32	chr2	-	2011	13	full-splice_match	ATF2	ENST00000345739.9	4079	13	38	2030	0	0	multi-exon	FALSE	canonical	1	128401	junction_9	98023.04596751725	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	354	1682	20.0	31	True	AATAAA	-15
PB.3598.4	chr14	-	5597	9	full-splice_match	GTF2A1	ENST00000553612.5	6306	9	12	697	12	-697	multi-exon	FALSE	canonical	1	208510	junction_1	22675.72992451125	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	393	1523	45.0	-38	True	ATTAAA	-11
PB.3598.6	chr14	-	5328	9	novel_in_catalog	GTF2A1	novel	6306	9	NA	NA	-65	-697	combination_of_known_junctions	FALSE	canonical	1	4375	junction_8	81752.96046311947	NA	2	1	TRUE	NA	NA	NA	C	coding	337	1014	241	1254	45.0	0	True	ATTAAA	-11
PB.7037.28	chr2	+	3315	18	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	1	-6	any annotated donor/acceptor	FALSE	canonical	1	1125	junction_5	370577.4815309106	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	1047	2753	30.0	-9	True	AATAAA	-20
PB.9209.3	chr5	+	2682	7	novel_in_catalog	ZNF131	novel	583	4	NA	NA	-3	0	intron_retention	FALSE	canonical	1	70781	junction_1	74460.39452118153	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	225	2096	80.0	1	True	NA	NA
PB.9209.2	chr5	+	3207	7	novel_in_catalog	ZNF131	novel	583	4	NA	NA	-3	0	intron_retention	FALSE	canonical	1	70781	junction_1	74460.39452118153	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	225	2096	35.0	1	True	AATAAA	-14
PB.9209.1	chr5	+	2595	8	novel_in_catalog	ZNF131	novel	583	4	NA	NA	17	0	intron_retention	FALSE	canonical	1	70781	junction_1	68951.327258984	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	240	2009	80.0	-14	True	NA	NA
PB.9209.7	chr5	+	2616	8	full-splice_match	ZNF131	ENST00000505606.6	3209	8	-12	605	-12	0	multi-exon	FALSE	canonical	1	45116	junction_1	75375.43484532907	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	261	2030	80.0	-687	False	NA	NA
PB.9209.6	chr5	+	2375	6	novel_in_catalog	ZNF131	novel	583	4	NA	NA	12	-2	intron_retention	FALSE	canonical	1	26050	junction_1	84405.22790538511	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	757	1791	75.0	-11	True	NA	NA
PB.9209.5	chr5	+	2429	8	full-splice_match	ZNF131	ENST00000306938.8	2400	8	-30	1	2	-1	multi-exon	FALSE	canonical	1	26050	junction_1	80465.28257476473	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	75	1844	80.0	-21	True	NA	NA
PB.9209.4	chr5	+	2550	7	novel_in_catalog	ZNF131	novel	583	4	NA	NA	-16	0	intron_retention	FALSE	canonical	1	26050	junction_1	86902.77665043595	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	93	1964	80.0	-2	True	NA	NA
PB.3038.3	chr13	-	2614	8	full-splice_match	ZMYM5	ENST00000337963.8	3268	8	119	535	7	-166	multi-exon	FALSE	canonical	1	57470	junction_2	31693.436353894595	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	147	2156	65.0	1	True	NA	NA
PB.3038.2	chr13	-	2656	5	novel_in_catalog	ZMYM5	novel	2861	5	NA	NA	41	-1	no_combination_of_known_junctions	FALSE	canonical	1	5006	junction_2	49484.79204260639	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	201	1664	25.0	0	True	ATTAAA	-18
PB.3038.1	chr13	-	3242	8	full-splice_match	ZMYM5	ENST00000337963.8	3268	8	33	-7	9	5	multi-exon	FALSE	canonical	1	57470	junction_2	31693.436353894595	NA	3	NA	TRUE	NA	NA	NA	C	coding	669	2010	233	2242	15.0	0	True	ATTAAA	-26
PB.9209.8	chr5	+	2923	6	incomplete-splice_match	ZNF131	ENST00000509156.5	2063	7	80	-430	-8	-1	5prime_fragment	FALSE	canonical	1	122344	junction_4	58505.22743618728	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	467	2338	80.0	-683	False	NA	NA
PB.10484.19	chr7	+	2459	15	novel_not_in_catalog	SEPT7	novel	509	4	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	372944.1374745454	NA	2	1	TRUE	NA	NA	NA	C	coding	407	1224	225	1448	25.0	2	True	AATAAA	-14
PB.3038.6	chr13	-	1851	7	incomplete-splice_match	ZMYM5	ENST00000337963.8	3268	8	132	11526	4	2443	3prime_fragment	FALSE	canonical	1	57470	junction_1	34029.90317843019	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	134	1408	90.0	142	False	NA	NA
PB.3038.5	chr13	-	1505	8	full-splice_match	ZMYM5	ENST00000337963.8	3268	8	119	1644	7	-1275	multi-exon	FALSE	canonical	1	57470	junction_2	31693.436353894595	NA	4	1	TRUE	NA	NA	NA	C	coding	453	1359	147	1505	55.0	1	True	NA	NA
PB.3038.4	chr13	-	2167	8	full-splice_match	ZMYM5	ENST00000337963.8	3268	8	24	1077	0	-708	multi-exon	FALSE	canonical	1	57470	junction_2	31693.436353894595	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1926	242	2167	65.0	-9	True	NA	NA
PB.9388.1	chr5	+	2628	3	full-splice_match	EPB41L4A-AS1	ENST00000413221.6	2969	3	338	3	-28	-3	multi-exon	FALSE	canonical	1	810781	junction_2	60113.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	10	33	332	364	25.0	-1	True	AATAAA	-44
PB.2740.22	chr12	+	2565	5	incomplete-splice_match	CAND1	ENST00000544619.1	4091	9	8423	-21	8423	21	5prime_fragment	FALSE	canonical	1	746565	junction_3	149898.29911226477	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	275	766	25.0	925	False	AATAAA	-38
PB.6419.9	chr2	-	2705	18	novel_not_in_catalog	PRKD3	novel	6111	19	NA	NA	24	-2441	any annotated donor/acceptor	FALSE	canonical	1	3336	junction_14	100172.67808976029	NA	2	NA	TRUE	NA	NA	NA	B	coding	781	2346	129	2474	35.0	-13	True	TATAAA	-13
PB.11646.16	chr9	-	4302	34	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	4	2	intron_retention	FALSE	canonical	1	33107	junction_3	374517.910956785	NA	0	NA	TRUE	NA	NA	NA	C	coding	1242	3729	110	3838	40.0	-18	True	AATAAA	-14
PB.6536.8	chr2	+	3095	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	-10	2260	-10	-172	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	39	1556	55.0	-10	True	NA	NA
PB.9466.24	chr5	+	2106	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	51	4780	-6	-51	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	244	1632	30.0	53	True	AAAAAG	-19
PB.11734.3	chr9	+	3780	6	novel_not_in_catalog	SLC31A1	novel	4744	5	NA	NA	-19	2442	any annotated donor/acceptor	FALSE	canonical	1	85	junction_5	94575.64192327748	NA	8	NA	TRUE	NA	NA	NA	C	coding	190	573	172	744	30.0	-45	True	AATAAA	-18
PB.5993.5	chr19	+	1655	1	novel_in_catalog	TIMM50	novel	1612	11	NA	NA	-2	-701	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-10	True	NA	NA
PB.62.1	chr1	+	6383	22	novel_in_catalog	PER3	novel	1524	10	NA	NA	-51	0	intron_retention	FALSE	canonical	1	19410	junction_5	32809.38925122729	NA	2	1	TRUE	NA	NA	NA	A	coding	1209	3630	333	3962	20.0	-26	True	AATAAA	-21
PB.10484.18	chr7	+	2400	5	incomplete-splice_match	SEPT7	ENST00000399034.7	4399	13	288	31427	1	1560	3prime_fragment	FALSE	canonical	1	60805	junction_1	690033.2312013585	NA	3	1	TRUE	NA	NA	NA	C	coding	121	366	145	510	25.0	1	True	AATAAA	-24
PB.3889.3	chr15	+	4585	9	incomplete-splice_match	TEX9	ENST00000537232.5	1768	13	-12	47654	-1	2	3prime_fragment	FALSE	canonical	1	17849	junction_2	23423.788842422036	NA	1	NA	TRUE	NA	NA	NA	B	coding	208	627	474	1100	15.0	0	True	NA	NA
PB.3889.2	chr15	+	3127	12	incomplete-splice_match	TEX9	ENST00000537232.5	1768	13	-16	15854	-5	21	3prime_fragment	FALSE	canonical	1	17849	junction_2	22018.290807102076	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	478	1428	35.0	-4	True	AATAAA	-43
PB.3889.1	chr15	+	1724	12	incomplete-splice_match	TEX9	ENST00000352903.6	1433	13	-21	16927	-21	-1175	3prime_fragment	FALSE	canonical	1	47293	junction_1	14492.921010668884	NA	1	NA	TRUE	NA	NA	NA	B	coding	391	1176	46	1221	35.0	-2606	False	ATTAAA	-14
PB.3889.7	chr15	+	1904	12	novel_not_in_catalog	TEX9	novel	689	6	NA	NA	4	-1173	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	29695.442614695014	NA	1	NA	TRUE	NA	NA	NA	B	coding	316	951	449	1399	35.0	25	True	ATTAAA	-16
PB.3889.6	chr15	+	2865	12	incomplete-splice_match	TEX9	ENST00000352903.6	1433	13	22	15743	2	9	3prime_fragment	FALSE	canonical	1	47293	junction_1	14492.921010668884	NA	2	1	TRUE	NA	NA	NA	B	coding	391	1176	3	1178	30.0	23	True	AATAAA	-36
PB.3889.5	chr15	+	1448	12	incomplete-splice_match	TEX9	ENST00000352903.6	1433	13	20	17162	0	-1410	3prime_fragment	FALSE	canonical	1	47293	junction_1	14492.921010668884	NA	0	NA	TRUE	NA	NA	NA	B	coding	391	1176	5	1180	60.0	21	True	NA	NA
PB.3889.4	chr15	+	3217	11	novel_in_catalog	TEX9	novel	689	6	NA	NA	1	27	intron_retention	FALSE	canonical	1	17849	junction_1	21594.316041264192	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	562	1512	30.0	13	True	AATAAA	-24
PB.6768.16	chr2	-	2637	7	incomplete-splice_match	ZEB2	ENST00000539609.7	4061	9	3	9512	3	355	3prime_fragment	FALSE	canonical	1	38912	junction_4	104723.41390804425	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2373	263	2635	65.0	2	True	NA	NA
PB.6768.17	chr2	-	3832	3	full-splice_match	ZEB2	ENST00000472146.5	3837	3	0	5	0	-5	multi-exon	FALSE	canonical	1	156997	junction_2	84558.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	251	637	70.0	-1	True	NA	NA
PB.10257.4	chr6	-	3180	7	novel_in_catalog	PLAGL1	novel	4430	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	431	junction_6	53241.07272272664	NA	1	NA	TRUE	NA	NA	NA	B	coding	463	1392	667	2058	25.0	0	True	NA	NA
PB.10257.3	chr6	-	3187	7	novel_in_catalog	PLAGL1	novel	4430	5	NA	NA	-8	0	intron_retention	FALSE	canonical	1	11667	junction_6	48621.773032310906	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	674	2065	25.0	-9	True	NA	NA
PB.10257.2	chr6	-	3207	8	novel_in_catalog	PLAGL1	novel	4430	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2163	junction_7	45860.82068429145	NA	8	1	TRUE	NA	NA	NA	B	coding	463	1392	694	2085	25.0	-3	True	NA	NA
PB.10257.1	chr6	-	2731	6	novel_in_catalog	PLAGL1	novel	4430	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	11667	junction_5	34665.926743129196	NA	1	NA	TRUE	NA	NA	NA	B	coding	411	1236	373	1608	20.0	-10	True	NA	NA
PB.6768.11	chr2	-	5227	10	full-splice_match	ZEB2	ENST00000409487.7	5361	10	134	0	27	0	multi-exon	FALSE	canonical	1	8513	junction_9	91960.35435762657	NA	4	1	TRUE	NA	NA	NA	C	coding	1209	3630	165	3794	40.0	7032	False	AATAAA	-15
PB.11833.1	chr9	-	2197	15	full-splice_match	KYAT1	ENST00000436267.6	2487	15	118	172	-12	-1	multi-exon	FALSE	canonical	1	4386	junction_14	55281.04824260318	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	177	1727	10.0	-27	True	AATAAA	-24
PB.11833.2	chr9	-	1925	13	full-splice_match	KYAT1	ENST00000302586.7	1903	13	-27	5	-5	1	multi-exon	FALSE	canonical	1	51133	junction_12	29112.961384636455	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	191	1459	10.0	-18	True	AATAAA	-20
PB.6249.1	chr19	-	2551	4	full-splice_match	ZNF416	ENST00000196489.3	2561	4	8	2	8	-2	multi-exon	FALSE	canonical	1	32819	junction_2	4352.834044874928	NA	0	NA	TRUE	NA	NA	NA	A	coding	594	1785	216	2000	10.0	-9	True	AATAAA	-18
PB.11777.7	chr9	+	4537	26	full-splice_match	RABGAP1	ENST00000373647.8	4997	26	11	449	0	-449	multi-exon	FALSE	canonical	1	51684	junction_1	93509.29303348625	NA	2	NA	TRUE	NA	NA	NA	C	coding	1069	3210	124	3333	75.0	0	True	NA	NA
PB.3543.4	chr14	+	2951	3	antisense	novelGene_HEATR4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9456	junction_2	2158.5	NA	1	NA	FALSE	NA	NA	NA	B	coding	641	1926	47	1972	25.0	39	True	AATAAA	-17
PB.8629.6	chr3	-	4170	2	full-splice_match	NCBP2	ENST00000463783.1	4161	2	-6	-3	-6	-2	multi-exon	FALSE	canonical	1	539606	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	64	366	0.0	-41	True	AATAAA	-18
PB.9215.8	chr5	+	3712	22	full-splice_match	NNT	ENST00000344920.8	4310	22	49	549	-23	-61	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	173	3433	20.0	-10	True	TATAAA	-24
PB.3543.1	chr14	+	2865	3	antisense	novelGene_HEATR4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	948	junction_2	6412.5	NA	0	NA	FALSE	NA	NA	NA	B	coding	641	1926	83	2008	20.0	3	True	AATAAA	-12
PB.3543.2	chr14	+	2965	4	antisense	novelGene_HEATR4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1116	junction_3	5253.482844742143	NA	6	NA	FALSE	NA	NA	NA	B	coding	641	1926	70	1995	30.0	16	True	AATAAA	-14
PB.3543.3	chr14	+	2436	1	full-splice_match	RIOX1	ENST00000304061.7	2429	1	2	-9	2	9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	641	1926	53	1978	30.0	33	True	ATTAAA	-23
PB.9215.4	chr5	+	2619	14	incomplete-splice_match	NNT	ENST00000344920.8	4310	22	21	51659	21	-7	3prime_fragment	FALSE	canonical	1	242335	junction_1	93632.72969060343	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	201	2291	90.0	-882	False	TATAAA	-34
PB.9215.5	chr5	+	6429	22	full-splice_match	NNT	ENST00000344920.8	4310	22	36	-2155	36	-18	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	5	NA	TRUE	NA	NA	NA	C	coding	1086	3261	186	3446	65.0	-23	True	NA	NA
PB.9215.6	chr5	+	4066	22	full-splice_match	NNT	ENST00000344920.8	4310	22	44	200	-28	-200	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	178	3438	40.0	-15	True	ATTAAA	-29
PB.4606.4	chr16	-	6463	40	incomplete-splice_match	PIEZO1	ENST00000301015.14	8089	51	48871	15	-3369	-7	5prime_fragment	TRUE	canonical	1	376732	junction_22	179541.17497530242	NA	2	NA	TRUE	NA	NA	NA	B	coding	2058	6177	35	6211	45.0	NA	False	ATTAAA	-18
PB.4606.3	chr16	-	3603	22	novel_not_in_catalog	PIEZO1	novel	8089	51	NA	NA	992	-6	intron_retention	TRUE	canonical	1	3731	junction_11	244196.98674313386	NA	1	NA	TRUE	NA	NA	NA	B	coding	507	1524	1827	3350	40.0	647	False	ATTAAA	-19
PB.9215.1	chr5	+	4137	22	full-splice_match	NNT	ENST00000264663.9	6483	22	-36	2382	-5	-209	multi-exon	TRUE	canonical	1	68144	junction_1	146968.48914236383	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	258	3518	45.0	-6	True	ATTAAA	-20
PB.9215.2	chr5	+	4656	22	full-splice_match	NNT	ENST00000264663.9	6483	22	-13	1840	5	79	multi-exon	FALSE	canonical	1	68144	junction_1	146968.48914236383	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	235	3495	25.0	17	True	AATATA	-23
PB.9215.3	chr5	+	4341	22	full-splice_match	NNT	ENST00000264663.9	6483	22	-31	2173	0	0	multi-exon	FALSE	canonical	1	68144	junction_1	146968.48914236383	NA	1	NA	TRUE	NA	NA	NA	C	coding	1086	3261	253	3513	30.0	-1	True	AATAAA	-20
PB.4908.14	chr17	+	3678	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	34	6879	-1	416	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	3	NA	TRUE	NA	NA	NA	C	coding	891	2676	115	2790	20.0	-2	True	NA	NA
PB.4908.15	chr17	+	4789	4	incomplete-splice_match	SLFN5	ENST00000299977.8	10591	5	35	5935	0	1360	intron_retention	FALSE	canonical	1	239634	junction_1	16303.423962127981	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	114	2012	75.0	-1	True	NA	NA
PB.4908.16	chr17	+	3708	4	full-splice_match	SLFN5	ENST00000542451.1	2540	4	0	-1168	0	1168	multi-exon	FALSE	canonical	1	13910	junction_3	116124.74513594803	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	114	1283	80.0	-1	True	NA	NA
PB.4908.17	chr17	+	2459	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	35	8097	0	-802	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2346	114	2459	30.0	-1	True	AATAAA	-19
PB.4908.10	chr17	+	4638	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	18	5935	-17	1360	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	131	2806	75.0	-3388	False	NA	NA
PB.4908.11	chr17	+	2837	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	31	7723	-4	-428	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	0	NA	TRUE	NA	NA	NA	C	coding	891	2676	118	2793	40.0	-5	True	AAGAAA	-23
PB.4908.12	chr17	+	3787	1	novel_in_catalog	SLFN5	novel	10591	5	NA	NA	-2	-12965	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	122	369	79	447	80.0	-3	True	NA	NA
PB.4908.13	chr17	+	3925	5	full-splice_match	SLFN5	ENST00000299977.8	10591	5	34	6632	-1	663	multi-exon	FALSE	canonical	1	239634	junction_1	20266.862633372733	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	115	2790	40.0	-2	True	AATAAA	-29
PB.10247.8	chr6	+	2982	4	incomplete-splice_match	VTA1	ENST00000620996.4	3272	7	101	47979	6	-25814	3prime_fragment	FALSE	canonical	1	451778	junction_2	278456.9139458064	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	26	466	95.0	0	True	AATGAA	-34
PB.10247.9	chr6	+	2178	8	full-splice_match	VTA1	ENST00000367630.8	7028	8	33	4817	6	805	multi-exon	FALSE	canonical	1	451778	junction_2	195021.9438935014	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	26	949	25.0	0	True	NA	NA
PB.9376.1	chr5	-	2502	1	novel_in_catalog	EFNA5	novel	5335	5	NA	NA	-7810	-84283	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	124	375	2	376	25.0	NA	False	ATTAAA	-12
PB.9775.11	chr6	+	3784	16	novel_in_catalog	CDKAL1	novel	3272	16	NA	NA	86	-3	intron_retention	FALSE	canonical	1	17324	junction_1	46649.64331077165	NA	4	NA	TRUE	NA	NA	NA	C	coding	579	1740	683	2422	35.0	7	True	AATAAA	-20
PB.9775.10	chr6	+	2083	15	novel_in_catalog	CDKAL1	novel	3272	16	NA	NA	-9	-148	no_combination_of_known_junctions	FALSE	canonical	1	20400	junction_12	46833.27648228689	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	153	1829	40.0	-9	True	ATTAAA	-23
PB.6989.2	chr2	+	1299	12	incomplete-splice_match	ATIC	ENST00000236959.13	2213	16	242	10868	-13	3891	3prime_fragment	FALSE	canonical	1	815763	junction_7	191454.68054886023	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1215	85	1299	55.0	-22	True	NA	NA
PB.8629.1	chr3	-	2537	3	full-splice_match	NCBP2	ENST00000468923.5	1096	3	-10	-1431	-10	0	multi-exon	FALSE	canonical	1	539606	junction_2	160816.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	31	549	0.0	-8	True	AATAAA	-20
PB.4293.12	chr16	-	4059	10	novel_in_catalog	ERI2	novel	1479	11	NA	NA	2	-3	intron_retention	FALSE	canonical	1	2464	junction_9	45794.50407102484	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	886	2682	40.0	27	True	AATAAA	-14
PB.4506.10	chr16	+	2933	10	novel_in_catalog	SLC7A6	novel	6124	10	NA	NA	61	1575	intron_retention	FALSE	canonical	1	3489	junction_2	97330.26475350642	NA	7	1	TRUE	NA	NA	NA	C	coding	403	1212	42	1253	15.0	-3297	False	AATAAA	-13
PB.145.10	chr1	-	4183	14	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	-3	3	intron_retention	FALSE	canonical	1	13527	junction_9	511537.4680596252	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	884	2065	25.0	-18	True	AATAAA	-19
PB.6989.6	chr2	+	2240	15	full-splice_match	ATIC	ENST00000435675.5	2275	15	39	-4	0	4	multi-exon	FALSE	canonical	1	815763	junction_6	250256.87437140036	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	353	2128	15.0	49	True	AATAAA	-26
PB.3895.1	chr15	+	2760	6	full-splice_match	AQP9	ENST00000219919.8	3034	6	272	2	87	-2	multi-exon	FALSE	canonical	1	173890	junction_5	82521.98871428148	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	99	986	0.0	-9288	False	AATAAA	-17
PB.3895.2	chr15	+	6623	1	novel_in_catalog	AQP9	novel	1334	6	NA	NA	10	-1882	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	3077	3388	100.0	-9365	False	NA	NA
PB.11823.9	chr9	+	2485	18	novel_in_catalog	ODF2	novel	578	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	35622	junction_1	148880.97122832478	NA	1	1	TRUE	NA	NA	NA	C	coding	633	1902	482	2383	30.0	-6	True	AATAAA	-14
PB.11823.8	chr9	+	3518	21	novel_in_catalog	ODF2	novel	578	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	21295	junction_18	130245.73429602216	NA	1	NA	TRUE	NA	NA	NA	C	coding	857	2574	242	2815	25.0	-6	True	AAAAAG	-15
PB.11823.7	chr9	+	3250	20	novel_in_catalog	ODF2	novel	578	5	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	25794	junction_4	115990.04983734035	NA	2	NA	TRUE	NA	NA	NA	C	coding	767	2304	245	2548	25.0	-9	True	AAAAAG	-14
PB.11823.6	chr9	+	2260	17	novel_in_catalog	ODF2	novel	578	5	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	89346	junction_4	110676.750938544	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	256	2157	30.0	-20	True	AATAAA	-15
PB.11823.5	chr9	+	2319	17	incomplete-splice_match	ODF2	ENST00000351030.7	3899	21	129	6459	6	0	3prime_fragment	FALSE	canonical	1	239408	junction_1	90182.89281507937	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	259	2217	30.0	-4450	False	AATAAA	-14
PB.610.8	chr1	-	1402	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	-23	221	combination_of_known_junctions	FALSE	canonical	1	166332	junction_9	230777.18921697803	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	345	1145	25.0	-8	True	AATAAA	-20
PB.11823.3	chr9	+	3683	22	novel_in_catalog	ODF2	novel	578	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	35622	junction_1	129257.53101112899	NA	1	NA	TRUE	NA	NA	NA	C	coding	824	2475	505	2979	25.0	-4456	False	AAAAAG	-16
PB.11823.2	chr9	+	3534	21	full-splice_match	ODF2	ENST00000351030.7	3899	21	123	242	0	90	multi-exon	FALSE	canonical	1	239408	junction_1	88105.41474228472	NA	2	NA	TRUE	NA	NA	NA	C	coding	824	2475	265	2739	35.0	-4456	False	AGTAAA	-19
PB.11823.1	chr9	+	3429	21	novel_in_catalog	ODF2	novel	578	5	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	40622	junction_2	115105.10580243605	NA	2	NA	TRUE	NA	NA	NA	C	coding	824	2475	251	2725	25.0	-4479	False	AAAAAG	-16
PB.1845.11	chr11	+	2285	16	novel_in_catalog	GTF2H1	novel	2707	16	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	9042	junction_1	132679.9371502548	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	251	1897	25.0	0	True	ATTAAA	-28
PB.1845.10	chr11	+	2567	15	full-splice_match	GTF2H1	ENST00000265963.8	2982	15	-29	444	0	-213	multi-exon	FALSE	canonical	1	115329	junction_3	99836.90087523975	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	190	1836	25.0	0	True	AATAAA	-25
PB.1845.13	chr11	+	2159	9	incomplete-splice_match	GTF2H1	ENST00000418116.6	1822	14	10	11934	0	5	3prime_fragment	FALSE	canonical	1	115329	junction_3	79401.40288187216	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	190	1347	25.0	0	True	AATAAA	-20
PB.1845.12	chr11	+	2256	11	incomplete-splice_match	GTF2H1	ENST00000418116.6	1822	14	10	7517	0	4422	3prime_fragment	FALSE	canonical	1	115329	junction_3	101180.84466261388	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	190	1536	60.0	0	True	GATAAA	-14
PB.1845.15	chr11	+	1962	13	novel_not_in_catalog	GTF2H1	novel	2707	16	NA	NA	0	306	any annotated donor/acceptor	FALSE	canonical	1	1898	junction_8	120384.4333639286	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	190	1167	30.0	0	True	AATAAA	-15
PB.1845.14	chr11	+	2022	2	full-splice_match	GTF2H1	ENST00000526461.1	568	2	-1	-1453	0	-977	multi-exon	FALSE	canonical	1	259353	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-23
PB.1845.17	chr11	+	2248	12	incomplete-splice_match	GTF2H1	ENST00000534641.5	2587	14	15538	0	-112	0	5prime_fragment	FALSE	canonical	1	143814	junction_4	100040.91722691922	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	6	1304	15.0	NA	False	AATAAA	-14
PB.1845.16	chr11	+	2227	3	incomplete-splice_match	GTF2H1	ENST00000453096.6	2707	16	274	31354	0	-977	3prime_fragment	FALSE	canonical	1	8282	junction_1	451.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	2	True	AATAAA	-23
PB.8532.10	chr3	+	3152	17	full-splice_match	MFN1	ENST00000357390.8	3148	17	0	-4	0	4	multi-exon	FALSE	canonical	1	2351	junction_10	112363.3633918742	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	84	1196	15.0	0	True	ATTAAA	-29
PB.610.4	chr1	-	1965	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	110333	junction_9	242372.59645038	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	338	1138	30.0	4	True	AATAAA	-13
PB.4504.10	chr16	+	2660	8	novel_in_catalog	AC130462.1	novel	549	3	NA	NA	8038	104626	no_combination_of_known_junctions	FALSE	canonical	1	3707	junction_1	89034.87981982461	NA	0	NA	TRUE	NA	NA	NA	B	coding	596	1791	444	2234	100.0	8	True	TTTAAA	-32
PB.4504.11	chr16	+	4040	11	full-splice_match	NFATC3	ENST00000349223.9	6328	11	-73	2361	-4	-37	multi-exon	FALSE	canonical	1	27688	junction_9	91792.46811171382	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	298	3495	100.0	-1253	False	TTTAAA	-32
PB.2060.9	chr11	-	5676	1	full-splice_match	MAP3K11	ENST00000527304.1	5605	1	-74	3	-61	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	272	819	555	1373	85.0	2277	False	NA	NA
PB.2060.8	chr11	-	3208	11	novel_not_in_catalog	MAP3K11	novel	3566	10	NA	NA	18	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	186038.4154926342	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	132	2675	20.0	2	True	AATAAA	-19
PB.2060.7	chr11	-	3599	11	novel_in_catalog	MAP3K11	novel	3566	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	6627	junction_2	235135.48182313956	NA	2	NA	TRUE	NA	NA	NA	C	coding	656	1971	473	2443	20.0	-8	True	AATAAA	-19
PB.2060.6	chr11	-	3679	9	novel_in_catalog	MAP3K11	novel	3566	10	NA	NA	-4	0	intron_retention	FALSE	canonical	1	416646	junction_2	81676.38207125729	NA	1	NA	TRUE	NA	NA	NA	C	coding	882	2649	498	3146	20.0	-33	True	AATAAA	-19
PB.799.1	chr1	-	1504	9	novel_not_in_catalog	SCAMP3	novel	649	3	NA	NA	-21	-1	any annotated donor/acceptor	FALSE	canonical	1	48219	junction_5	336269.9168283336	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	210	1211	15.0	-1	True	AATAAA	-24
PB.2060.4	chr11	-	2654	10	full-splice_match	MAP3K11	ENST00000530153.5	2830	10	175	1	175	1	multi-exon	FALSE	canonical	1	1666	junction_9	195501.63375333266	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	348	2120	15.0	5461	False	AATAAA	-20
PB.2060.3	chr11	-	2647	6	novel_not_in_catalog	MAP3K11	novel	3566	10	NA	NA	16	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	240109.77298777326	NA	1	1	TRUE	NA	NA	NA	C	coding	561	1686	465	2150	15.0	0	True	AATAAA	-21
PB.2060.2	chr11	-	3213	11	novel_not_in_catalog	MAP3K11	novel	3566	10	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	186038.4154926342	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	135	2678	15.0	-37	True	AATAAA	-21
PB.2060.1	chr11	-	3653	10	full-splice_match	MAP3K11	ENST00000309100.7	3566	10	-91	4	-84	-1	multi-exon	FALSE	canonical	1	416646	junction_2	86503.51646217042	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	578	3121	20.0	2254	False	AATAAA	-18
PB.10373.1	chr7	+	4750	14	full-splice_match	TTYH3	ENST00000258796.11	4840	14	81	9	81	-7	multi-exon	FALSE	canonical	1	444147	junction_1	159756.65306533888	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	125	1696	35.0	-3	True	AATAAA	-5
PB.1847.19	chr11	+	1630	8	novel_not_in_catalog	LDHA	novel	2416	8	NA	NA	3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	2654432.1937627112	NA	20	3	TRUE	NA	NA	NA	C	coding	323	972	96	1067	25.0	3	True	AATAAA	-11
PB.1847.18	chr11	+	1687	8	novel_not_in_catalog	LDHA	novel	2416	8	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	80	junction_1	2100836.0518486393	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	125	1123	25.0	1	True	AATAAA	-12
PB.1847.13	chr11	+	2033	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	175	208	0	-1	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	99	1097	15.0	0	True	ATTAAA	-18
PB.1847.12	chr11	+	2869	1	novel_in_catalog	LDHA	novel	2416	8	NA	NA	0	33	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	120	363	1138	1500	60.0	0	True	NA	NA
PB.1847.11	chr11	+	3358	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	175	-1117	0	1117	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	99	1097	60.0	0	True	AATAAA	-23
PB.1847.10	chr11	+	1538	7	full-splice_match	LDHA	ENST00000227157.8	1887	7	-23	372	0	-1	multi-exon	FALSE	canonical	1	10682	junction_6	2950812.086921591	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	99	824	25.0	0	True	AATAAA	-13
PB.1847.17	chr11	+	2144	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	176	96	1	-96	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	98	1096	80.0	1	True	NA	NA
PB.1847.16	chr11	+	3196	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	176	-956	1	956	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	98	1096	85.0	1	True	NA	NA
PB.1847.15	chr11	+	1487	7	full-splice_match	LDHA	ENST00000430553.6	1310	7	2	-179	1	-1	multi-exon	FALSE	canonical	1	3085	junction_3	2937667.164370362	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	98	922	25.0	1	True	AATAAA	-13
PB.1847.14	chr11	+	1774	9	novel_in_catalog	LDHA	novel	2416	8	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	5024	junction_3	2961902.4362937645	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	734	1213	25.0	0	True	AATAAA	-9
PB.10052.1	chr6	-	2033	16	full-splice_match	LMBRD1	ENST00000649934.1	2086	16	0	53	0	1	multi-exon	FALSE	canonical	1	334127	junction_13	96348.64341075765	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	112	1734	20.0	-1	True	ATTAAA	-15
PB.10052.2	chr6	-	2157	16	novel_not_in_catalog	LMBRD1	novel	2264	16	NA	NA	-58	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	153298.43503331082	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	400	1803	20.0	444	False	AATAAA	-19
PB.10052.3	chr6	-	2459	17	full-splice_match	LMBRD1	ENST00000649673.1	2358	17	-88	-13	8	0	multi-exon	FALSE	canonical	1	3552	junction_7	182652.84608701695	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	104	1129	20.0	7	True	AATAAA	-16
PB.4581.16	chr16	-	2930	15	novel_not_in_catalog	TAF1C	novel	3502	12	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	83562.62816142691	NA	7	1	TRUE	NA	NA	NA	C	coding	537	1614	1126	2739	20.0	0	True	AATACA	-17
PB.11098.25	chr8	+	3727	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-25	553	combination_of_known_junctions	FALSE	canonical	1	188558	junction_1	141990.6350805446	NA	2	NA	TRUE	NA	NA	NA	C	coding	776	2331	346	2676	35.0	1	True	ATTAAA	-28
PB.7977.5	chr3	-	1632	5	novel_not_in_catalog	NKIRAS1	novel	2335	5	NA	NA	2	29	any annotated donor/acceptor	FALSE	canonical	1	15805	junction_4	78781.89790808546	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	237	815	30.0	-1	True	AATAAA	-22
PB.7977.4	chr3	-	1660	5	full-splice_match	NKIRAS1	ENST00000425478.6	2014	5	142	212	1	14	multi-exon	FALSE	canonical	1	95769	junction_4	44330.09069469631	NA	8	NA	TRUE	NA	NA	NA	C	coding	192	579	280	858	40.0	37	True	AATAAA	-7
PB.177.31	chr1	+	3843	17	novel_in_catalog	SRRM1	novel	480	5	NA	NA	9	3	intron_retention	FALSE	canonical	1	7396	junction_1	211534.02409400325	NA	2	NA	TRUE	NA	NA	NA	C	coding	865	2598	262	2859	20.0	-5366	False	AATAAA	-20
PB.177.30	chr1	+	3892	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-4	3	intron_retention	FALSE	canonical	1	7396	junction_1	198531.27741277643	NA	2	NA	TRUE	NA	NA	NA	C	coding	877	2634	275	2908	20.0	-5379	False	AATAAA	-20
PB.7977.1	chr3	-	4094	5	full-splice_match	NKIRAS1	ENST00000425478.6	2014	5	46	-2126	46	1705	multi-exon	FALSE	canonical	1	95769	junction_4	44330.09069469631	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	376	954	30.0	26	True	AATAAA	-21
PB.177.36	chr1	+	2975	11	incomplete-splice_match	SRRM1	ENST00000323848.13	4011	17	9420	-2	-65	2	5prime_fragment	FALSE	canonical	1	68130	junction_6	197107.13165283998	NA	3	NA	TRUE	NA	NA	NA	C	coding	573	1722	271	1992	20.0	-3354	False	AATAAA	-19
PB.7977.3	chr3	-	1903	5	full-splice_match	NKIRAS1	ENST00000425478.6	2014	5	128	-17	-13	0	multi-exon	FALSE	canonical	1	95769	junction_4	44330.09069469631	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	294	872	35.0	23	True	ATTAAA	-25
PB.9016.10	chr4	-	2802	12	full-splice_match	SLC10A7	ENST00000335472.11	2798	12	-6	2	-6	-2	multi-exon	FALSE	canonical	1	49211	junction_1	12558.156070889805	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	223	1245	25.0	-28	True	AATAAA	-13
PB.9723.10	chr6	-	2818	10	full-splice_match	TXNDC5	ENST00000379757.8	2964	10	141	5	141	-5	multi-exon	FALSE	canonical	1	2031073	junction_9	440058.9402326595	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	105	1196	20.0	770	False	AATAAA	-12
PB.401.23	chr1	-	4282	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	245	-975	any annotated donor/acceptor	FALSE	canonical	1	1410	junction_24	157853.3041090331	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	664	2820	20.0	353	False	AATAAA	-19
PB.401.21	chr1	-	4177	25	full-splice_match	EPS15	ENST00000371733.7	5225	25	59	989	-15	-989	multi-exon	FALSE	canonical	1	221574	junction_24	136702.54397982341	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	39	2729	40.0	-4	True	AATAAA	-5
PB.401.24	chr1	-	3977	22	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-7585	-975	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	163369.02391083274	NA	4	1	TRUE	NA	NA	NA	C	coding	658	1977	539	2515	20.0	NA	False	AATAAA	-19
PB.6898.1	chr2	+	2386	6	full-splice_match	ASNSD1	ENST00000260952.8	2450	6	63	1	20	-1	multi-exon	FALSE	canonical	1	346190	junction_2	89768.41423351534	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	351	2282	20.0	24	True	TTTAAA	-5
PB.11098.20	chr8	+	2644	13	full-splice_match	TACC1	ENST00000317827.8	7802	13	249	4909	190	-13	multi-exon	FALSE	canonical	1	188558	junction_1	141129.10505298176	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	131	2548	80.0	-5	True	NA	NA
PB.401.29	chr1	-	3956	23	novel_in_catalog	EPS15	novel	4736	23	NA	NA	-17	-976	no_combination_of_known_junctions	FALSE	canonical	1	1348	junction_15	169800.46807540936	NA	2	NA	TRUE	NA	NA	NA	C	coding	590	1773	723	2495	20.0	-6	True	AATAAA	-18
PB.11477.1	chr9	-	4396	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	134	2242	31	1169	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	3	NA	TRUE	NA	NA	NA	C	coding	568	1707	154	1860	35.0	1260	False	AATAAA	-16
PB.5891.2	chr19	+	4862	3	full-splice_match	AC006504.5	ENST00000592404.5	765	3	-32	-4065	0	-2304	multi-exon	FALSE	canonical	1	7964	junction_2	22278.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-14
PB.5891.3	chr19	+	4796	3	full-splice_match	AC006504.5	ENST00000587188.1	746	3	-49	-4001	-24	-2305	multi-exon	FALSE	canonical	1	7964	junction_2	17337.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-39	False	AATAAA	-13
PB.5891.1	chr19	+	2446	1	full-splice_match	AC006504.5	ENST00000588784.1	2401	1	-2	-43	-2	43	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	159	480	1160	1639	85.0	-17	True	AATAAA	-9
PB.11098.22	chr8	+	5042	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	361	0	combination_of_known_junctions	FALSE	canonical	1	188558	junction_1	141990.6350805446	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	545	2290	100.0	83	False	NA	NA
PB.5867.4	chr19	-	2496	4	full-splice_match	ZNF14	ENST00000344099.3	2949	4	-16	469	-16	-469	multi-exon	FALSE	canonical	1	42666	junction_3	13229.331124437093	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	156	2084	50.0	-5	True	NA	NA
PB.11098.23	chr8	+	7768	13	full-splice_match	TACC1	ENST00000317827.8	7802	13	33	1	-26	-1	multi-exon	FALSE	canonical	1	188558	junction_1	141129.10505298176	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	347	2764	10.0	0	True	AATAAA	-18
PB.5867.1	chr19	-	2866	4	full-splice_match	ZNF14	ENST00000344099.3	2949	4	-12	95	-12	-95	multi-exon	FALSE	canonical	1	42666	junction_3	13229.331124437093	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	152	2080	50.0	-1	True	NA	NA
PB.5867.3	chr19	-	2647	4	full-splice_match	ZNF14	ENST00000344099.3	2949	4	-13	315	-13	-315	multi-exon	FALSE	canonical	1	42666	junction_3	13229.331124437093	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	153	2081	65.0	-2	True	NA	NA
PB.5867.2	chr19	-	3047	5	novel_not_in_catalog	ZNF14	novel	2949	4	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	canonical	1	553	junction_4	35024.92642658226	NA	3	NA	TRUE	NA	NA	NA	C	coding	610	1833	336	2168	40.0	2	True	AATAAA	-14
PB.1661.3	chr10	-	3710	11	novel_not_in_catalog	DCLRE1A	novel	4468	9	NA	NA	-13	-1	any annotated donor/acceptor	TRUE	canonical	1	714	junction_9	52210.53416658366	NA	1	NA	TRUE	NA	NA	NA	C	coding	1040	3123	162	3284	0.0	-19	True	AATAAA	-16
PB.1661.2	chr10	-	4481	10	full-splice_match	DCLRE1A	ENST00000369305.1	4241	10	-237	-3	-237	-1	multi-exon	FALSE	canonical	1	21266	junction_9	39861.971214878504	NA	0	NA	TRUE	NA	NA	NA	C	coding	1040	3123	933	4055	0.0	378	False	AATAAA	-16
PB.1661.5	chr10	-	2407	3	incomplete-splice_match	DCLRE1A	ENST00000369305.1	4241	10	-11	14675	-11	3839	3prime_fragment	FALSE	canonical	1	21266	junction_2	40517.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1701	707	2407	65.0	-17	True	AATGAA	-38
PB.8640.1	chr3	+	3853	17	full-splice_match	LMLN	ENST00000420910.6	2423	17	-19	-1411	1	1411	multi-exon	TRUE	canonical	1	27935	junction_1	5511.831461374137	NA	3	NA	TRUE	NA	NA	NA	C	coding	684	2055	44	2098	85.0	-588	False	NA	NA
PB.7607.1	chr22	-	3082	18	incomplete-splice_match	HIRA	ENST00000263208.5	4053	25	37281	3	35811	-3	5prime_fragment	TRUE	canonical	1	251803	junction_2	48833.332121937856	NA	0	NA	TRUE	NA	NA	NA	A	coding	775	2328	16	2343	20.0	2683	False	AATAAA	-20
PB.9386.7	chr5	-	4462	5	full-splice_match	STARD4	ENST00000511137.5	1135	5	-24	-3303	3	-66	multi-exon	FALSE	canonical	1	75844	junction_2	110494.78499317287	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	352	675	45.0	4	True	ATTAAA	-22
PB.9386.6	chr5	-	4555	5	novel_in_catalog	STARD4	novel	4606	6	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	1	34239	junction_4	98343.7628093414	NA	2	1	TRUE	NA	NA	NA	C	coding	123	372	335	706	40.0	466	False	AATAAA	-18
PB.9386.1	chr5	-	4666	6	novel_not_in_catalog	STARD4	novel	4606	6	NA	NA	13	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	127135.99209350592	NA	35	NA	TRUE	NA	NA	NA	C	coding	205	618	199	816	35.0	466	False	AATAAA	-19
PB.9386.2	chr5	-	4620	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-54	40	-2	-40	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	190	807	60.0	-1	True	AATAAA	-21
PB.9386.9	chr5	-	4475	5	full-splice_match	STARD4	ENST00000512160.5	3500	5	-65	-910	-10	-4	multi-exon	FALSE	canonical	1	6337	junction_1	149796.67817808077	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	443	False	AATAAA	-18
PB.9386.8	chr5	-	4449	4	full-splice_match	STARD4	ENST00000502931.5	838	4	-63	-3548	-8	-4	multi-exon	FALSE	canonical	1	34239	junction_3	95412.0033690148	NA	3	NA	TRUE	NA	NA	NA	C	coding	107	324	277	600	40.0	445	False	AATAAA	-18
PB.10363.1	chr7	-	6980	48	full-splice_match	INTS1	ENST00000404767.7	6959	48	-21	0	-21	0	multi-exon	TRUE	canonical	1	189582	junction_47	175727.96331134049	NA	0	NA	TRUE	NA	NA	NA	A	coding	2190	6573	108	6680	0.0	-7	True	AATGAA	-16
PB.841.4	chr1	+	1688	3	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	11	-2788	any annotated donor/acceptor	FALSE	canonical	1	3968	junction_2	10093.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	3	True	ATTAAA	-16
PB.11156.5	chr8	+	4922	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	58	183	-10	158	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	268	2025	40.0	-32	True	ATTAAA	-14
PB.318.8	chr1	+	2522	12	novel_in_catalog	CAP1	novel	3105	13	NA	NA	1	-25	intron_retention	FALSE	canonical	1	385351	junction_6	505784.8063103811	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	59	1303	90.0	12	True	NA	NA
PB.318.9	chr1	+	2175	13	full-splice_match	CAP1	ENST00000372805.7	2217	13	20	22	1	-22	multi-exon	FALSE	canonical	1	385351	junction_6	486021.1421432071	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	32	1459	90.0	-644	False	NA	NA
PB.11761.8	chr9	-	2811	7	novel_in_catalog	RAB14	novel	4145	8	NA	NA	-2	-1158	no_combination_of_known_junctions	FALSE	canonical	1	6964	junction_4	393296.4887089708	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	1591	1893	30.0	-3	True	AATAAA	-22
PB.3444.28	chr14	-	4608	5	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	-38	9447	intron_retention	FALSE	canonical	1	160	junction_1	64795.26014445424	NA	4	NA	TRUE	NA	NA	NA	C	coding	463	1392	223	1614	100.0	-7	True	NA	NA
PB.10484.13	chr7	+	1813	13	full-splice_match	SEPT7	ENST00000399034.7	4399	13	286	2300	0	305	multi-exon	FALSE	canonical	1	60805	junction_1	462118.9043617153	NA	1	1	TRUE	NA	NA	NA	C	coding	384	1155	147	1301	70.0	-1	True	AATACA	-6
PB.318.3	chr1	+	2206	13	novel_in_catalog	CAP1	novel	3105	13	NA	NA	0	-25	combination_of_known_junctions	FALSE	canonical	1	154032	junction_1	579523.1268868827	NA	1	1	TRUE	NA	NA	NA	C	coding	475	1428	66	1493	90.0	-10	True	NA	NA
PB.145.16	chr1	-	3919	13	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	2262	junction_11	442824.33269908384	NA	3	NA	TRUE	NA	NA	NA	C	coding	515	1548	261	1808	35.0	-8	True	AATAAA	-12
PB.318.1	chr1	+	2385	13	novel_in_catalog	CAP1	novel	3105	13	NA	NA	-3	-25	combination_of_known_junctions	FALSE	canonical	1	4656	junction_1	603046.7720805327	NA	7	NA	TRUE	NA	NA	NA	C	coding	475	1428	245	1672	90.0	-3	True	NA	NA
PB.318.6	chr1	+	1576	8	novel_not_in_catalog	CAP1	novel	3105	13	NA	NA	1	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	533445.5198006136	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	150	863	90.0	12	True	NA	NA
PB.318.7	chr1	+	2576	13	full-splice_match	CAP1	ENST00000372797.7	3105	13	521	8	1	0	multi-exon	FALSE	canonical	1	385351	junction_6	541051.7903672798	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	41	1468	25.0	12	True	AATAAA	-10
PB.318.4	chr1	+	3073	12	incomplete-splice_match	CAP1	ENST00000372805.7	2217	13	-9	-377	0	-1	intron_retention	FALSE	canonical	1	385351	junction_6	505413.72769793327	NA	3	1	TRUE	NA	NA	NA	C	coding	456	1371	61	1431	15.0	10	True	AATAAA	-17
PB.8617.13	chr3	-	2205	9	full-splice_match	PCYT1A	ENST00000431016.5	1482	9	100	-823	7	823	multi-exon	FALSE	canonical	1	259432	junction_7	101017.94275245116	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	142	1245	25.0	-68	True	NA	NA
PB.5227.3	chr17	+	1524	6	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	39559	junction_5	160296.50175421796	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	71	862	30.0	0	True	AGTAAA	-10
PB.5227.2	chr17	+	2458	6	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	34588	junction_1	92844.26452851032	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1287	1796	30.0	-891	False	AGTAAA	-10
PB.5227.1	chr17	+	1630	7	full-splice_match	CD300A	ENST00000360141.7	1858	7	220	8	-22	-2	multi-exon	FALSE	canonical	1	193648	junction_3	113790.81466848133	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	69	968	30.0	2	True	AGTAAA	-10
PB.9662.5	chr5	+	4087	7	novel_in_catalog	ZNF354B	novel	2802	5	NA	NA	29	1202	no_combination_of_known_junctions	FALSE	canonical	1	6365	junction_6	36111.24435530973	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	198	2036	45.0	-18	True	AATAAA	-16
PB.5227.7	chr17	+	1725	5	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-4	-2	no_combination_of_known_junctions	FALSE	canonical	1	6419	junction_4	187819.81378355026	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	310	981	30.0	-11	True	AGTAAA	-10
PB.5227.6	chr17	+	1881	2	incomplete-splice_match	CD300A	ENST00000582319.5	1369	6	-283	9103	-6	-9102	intron_retention	FALSE	canonical	1	234557	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	312	722	45.0	-13	True	NA	NA
PB.5227.5	chr17	+	1796	7	full-splice_match	CD300A	ENST00000648095.1	1785	7	-6	-5	-6	3	multi-exon	FALSE	canonical	1	34588	junction_1	148962.3374231069	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	614	1123	15.0	-13	True	AGTAAA	-21
PB.5227.4	chr17	+	1462	6	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	3669	junction_1	104118.31218877879	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	283	792	15.0	-883	False	AGTAAA	-18
PB.5227.9	chr17	+	2416	5	novel_in_catalog	CD300A	novel	1785	7	NA	NA	0	-2	intron_retention	FALSE	canonical	1	39559	junction_4	96073.28893740445	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	1353	1754	30.0	-7	True	AGTAAA	-10
PB.5227.8	chr17	+	1675	5	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	2709	junction_3	209199.07585120926	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	309	848	15.0	-10	True	AGTAAA	-18
PB.1109.16	chr1	+	3798	15	full-splice_match	DTL	ENST00000366991.4	4573	15	192	583	-77	-171	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	123	2315	40.0	-24	True	AATAAA	-32
PB.8121.3	chr3	-	3257	8	full-splice_match	GMPPB	ENST00000308375.10	3217	8	-25	-15	-25	15	multi-exon	FALSE	canonical	1	254099	junction_7	34982.373379536526	NA	3	1	TRUE	NA	NA	NA	C	coding	387	1164	251	1414	15.0	-27	True	AATAAA	-26
PB.8121.2	chr3	-	2840	1	full-splice_match	AMIGO3	ENST00000320431.7	2862	1	10	12	10	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	504	1515	221	1735	30.0	-4	True	AATAAA	-21
PB.8121.5	chr3	-	3075	10	full-splice_match	GMPPB	ENST00000480687.5	6108	10	-40	3073	-40	7	multi-exon	FALSE	canonical	1	4802	junction_9	106570.70734331418	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	158	1240	25.0	663	False	AATAAA	-18
PB.11037.1	chr8	-	3637	14	full-splice_match	LOXL2	ENST00000389131.7	3549	14	-98	10	-98	-10	multi-exon	TRUE	canonical	1	497062	junction_13	163846.50632645364	NA	1	NA	TRUE	NA	NA	NA	A	coding	774	2325	469	2793	60.0	-219	False	NA	NA
PB.10484.12	chr7	+	2348	14	novel_not_in_catalog	SEPT7	novel	509	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	490403.1091307442	NA	15	3	TRUE	NA	NA	NA	C	coding	428	1287	50	1336	30.0	-1	True	AATAAA	-15
PB.9723.1	chr6	-	2760	10	novel_not_in_catalog	TXNDC5	novel	2704	4	NA	NA	-59	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	915025.5041011187	NA	2	1	TRUE	NA	NA	NA	C	coding	324	975	156	1130	15.0	1307	False	AATAAA	-20
PB.1675.2	chr10	-	2752	12	novel_in_catalog	SFXN4	novel	952	5	NA	NA	-55	-9	intron_retention	FALSE	canonical	1	48140	junction_8	143524.07499057718	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	1791	2432	55.0	-23	False	AATAAA	-23
PB.1675.3	chr10	-	2759	12	novel_in_catalog	SFXN4	novel	952	5	NA	NA	148	-9	intron_retention	FALSE	canonical	1	48140	junction_8	158514.73193543236	NA	2	1	TRUE	NA	NA	NA	C	coding	213	642	1798	2439	55.0	22	True	AATAAA	-23
PB.1675.1	chr10	-	1385	14	full-splice_match	SFXN4	ENST00000355697.6	1363	14	-31	9	-31	-9	multi-exon	FALSE	canonical	1	48140	junction_8	136542.21030680384	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	52	1065	55.0	1	True	AATAAA	-23
PB.9723.8	chr6	-	2855	10	novel_not_in_catalog	TXNDC5	novel	2704	4	NA	NA	158	-5	any annotated donor/acceptor	FALSE	canonical	1	696	junction_9	914828.7000679957	NA	2	NA	TRUE	NA	NA	NA	C	coding	324	975	259	1233	20.0	1524	False	AATAAA	-12
PB.9723.9	chr6	-	2841	10	novel_not_in_catalog	TXNDC5	novel	2704	4	NA	NA	-630	-5	any annotated donor/acceptor	FALSE	canonical	1	1339	junction_9	914646.8914018873	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	245	1219	20.0	-1	True	AATAAA	-12
PB.8060.1	chr3	+	3083	3	full-splice_match	ZNF501	ENST00000396048.6	3099	3	17	-1	7	1	multi-exon	FALSE	canonical	1	11253	junction_1	8297.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	421	1236	15.0	-22	True	NA	NA
PB.8060.2	chr3	+	3362	3	full-splice_match	ZNF501	ENST00000620116.4	3382	3	13	7	-5	-7	multi-exon	FALSE	canonical	1	14569	junction_1	6639.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	708	1523	15.0	-16	True	NA	NA
PB.9658.5	chr5	+	1720	6	full-splice_match	HNRNPAB	ENST00000506259.5	1674	6	-15	-31	0	17	multi-exon	FALSE	canonical	1	390516	junction_5	1020591.5712897888	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	306	1163	20.0	0	True	AATAAA	-34
PB.9658.4	chr5	+	1647	7	full-splice_match	HNRNPAB	ENST00000355836.9	1602	7	-8	-37	-2	16	multi-exon	FALSE	canonical	1	390516	junction_6	1017725.8627943343	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	234	1091	20.0	-2	True	AATAAA	-33
PB.9658.6	chr5	+	1342	6	incomplete-splice_match	HNRNPAB	ENST00000504898.5	1785	7	1270	-32	273	11	5prime_fragment	FALSE	canonical	1	1315272	junction_1	724220.2846320724	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	6	791	15.0	-4378	False	AATAAA	-28
PB.9658.1	chr5	+	1844	8	novel_not_in_catalog	HNRNPAB	novel	1796	8	NA	NA	-25	-2	any annotated donor/acceptor	FALSE	canonical	1	86	junction_7	1015021.0370237733	NA	2	1	TRUE	NA	NA	NA	C	coding	320	963	283	1245	20.0	-5737	False	AATAAA	-15
PB.9658.3	chr5	+	1770	8	full-splice_match	HNRNPAB	ENST00000358344.7	1796	8	24	2	-2	-2	multi-exon	FALSE	canonical	1	589128	junction_1	839227.0517740641	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	234	1232	20.0	-2	True	AATAAA	-15
PB.9658.2	chr5	+	1862	7	full-splice_match	HNRNPAB	ENST00000504898.5	1785	7	-40	-37	-2	16	multi-exon	FALSE	canonical	1	1128015	junction_1	751874.4837355205	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	308	1306	20.0	-2	True	AATAAA	-33
PB.10830.12	chr7	+	2122	8	novel_not_in_catalog	IRF5	novel	2988	9	NA	NA	-10	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	116655.12791216717	NA	3	1	TRUE	NA	NA	NA	C	coding	255	768	794	1561	40.0	-54	True	AATGAA	-5
PB.6515.2	chr2	-	1192	5	full-splice_match	C1D	ENST00000355848.7	2233	5	-30	1071	-4	8	multi-exon	FALSE	canonical	1	467	junction_2	34374.85590515253	NA	1	NA	TRUE	NA	NA	NA	C	coding	141	426	79	504	15.0	-24	True	AATAAA	-23
PB.10830.13	chr7	+	2893	9	full-splice_match	IRF5	ENST00000357234.9	1680	9	-7	-1206	-4	3	multi-exon	FALSE	canonical	1	69172	junction_1	91663.32865676165	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	129	1673	5.0	-48	True	NA	NA
PB.10830.10	chr7	+	2606	7	novel_in_catalog	IRF5	novel	2988	9	NA	NA	-10	-9	intron_retention	FALSE	canonical	1	69172	junction_1	93437.3516630558	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	1236	2045	40.0	-54	True	AATGAA	-5
PB.8640.5	chr3	+	3003	17	full-splice_match	LMLN	ENST00000420910.6	2423	17	9	-589	9	589	multi-exon	FALSE	canonical	1	27935	junction_1	5511.831461374137	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	16	2070	75.0	-2	True	NA	NA
PB.3444.24	chr14	-	2948	13	full-splice_match	DDHD1	ENST00000323669.9	5503	13	-99	2654	7	-595	multi-exon	FALSE	canonical	1	70289	junction_1	96433.06224253289	NA	2	NA	TRUE	NA	NA	NA	C	coding	900	2703	100	2802	65.0	116	True	TTTAAA	-13
PB.11092.6	chr8	+	4422	17	novel_in_catalog	DDHD2	novel	568	4	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	13464	junction_5	110835.34543846942	NA	29	1	TRUE	NA	NA	NA	C	coding	681	2046	182	2227	20.0	0	True	AGTAAA	-18
PB.3040.28	chr13	+	4629	25	novel_in_catalog	ZMYM2	novel	10200	25	NA	NA	98	-1	combination_of_known_junctions	FALSE	canonical	1	192372	junction_2	119960.50641801955	NA	3	NA	TRUE	NA	NA	NA	C	coding	1290	3873	81	3953	5.0	933	False	ATTAAA	-15
PB.11672.1	chr9	+	2524	8	novel_in_catalog	TMOD1	novel	3259	10	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	817	junction_1	104743.11053433616	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	299	970	10.0	-29	True	ATTAAA	-15
PB.10830.11	chr7	+	2353	10	novel_in_catalog	IRF5	novel	2988	9	NA	NA	-10	-9	intron_retention	FALSE	canonical	1	1993	junction_1	115593.85751942973	NA	2	NA	TRUE	NA	NA	NA	C	coding	514	1545	248	1792	40.0	-54	True	AATGAA	-5
PB.7092.2	chr2	+	2441	12	full-splice_match	SCLY	ENST00000254663.10	2562	12	120	1	8	0	multi-exon	FALSE	canonical	1	82393	junction_10	51524.72002738905	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	23	1384	10.0	8	True	AATAAA	-16
PB.3040.21	chr13	+	4825	26	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	212	0	any annotated donor/acceptor	FALSE	canonical	1	35941	junction_1	138050.79517838932	NA	0	NA	TRUE	NA	NA	NA	C	coding	1290	3873	221	4093	30.0	-29	False	AATAAA	-19
PB.3040.20	chr13	+	4864	27	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	185	5	any annotated donor/acceptor	FALSE	canonical	1	4325	junction_3	166785.77820976518	NA	3	1	TRUE	NA	NA	NA	C	coding	1290	3873	310	4182	10.0	-56	False	ATTAAA	-21
PB.3040.23	chr13	+	4875	26	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	205	-210	intron_retention	FALSE	canonical	1	35941	junction_1	155603.17384934792	NA	0	NA	TRUE	NA	NA	NA	C	coding	1354	4065	344	4408	15.0	-36	False	AATAAA	-10
PB.3040.22	chr13	+	5045	25	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	202	4	intron_retention	FALSE	canonical	1	35941	junction_1	134704.73030288218	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	231	4364	15.0	-39	False	ATTAAA	-20
PB.3040.25	chr13	+	4877	27	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	206	-1	any annotated donor/acceptor	FALSE	canonical	1	35941	junction_1	156814.9295085239	NA	2	NA	TRUE	NA	NA	NA	C	coding	1267	3804	343	4146	30.0	-35	False	AATAAA	-18
PB.3040.24	chr13	+	4567	26	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	205	-210	any annotated donor/acceptor	FALSE	canonical	1	35941	junction_1	138050.79517838932	NA	0	NA	TRUE	NA	NA	NA	C	coding	1290	3873	228	4100	15.0	-36	False	AATAAA	-10
PB.3040.27	chr13	+	5078	26	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	216	4	intron_retention	FALSE	canonical	1	35941	junction_1	155603.17384934792	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	264	4397	15.0	-25	False	ATTAAA	-20
PB.3040.26	chr13	+	2664	12	novel_not_in_catalog	ZMYM2	novel	10200	25	NA	NA	216	5686	intron_retention	FALSE	canonical	1	35941	junction_1	113033.03098557131	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	217	2631	20.0	-25	False	ATTAAA	-17
PB.9246.16	chr5	+	2699	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	282	-442	-8	-265	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	30	2150	15.0	0	True	AAGAAA	-27
PB.9246.17	chr5	+	5577	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-7	2671	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	4	NA	TRUE	NA	NA	NA	C	coding	687	2064	29	2092	65.0	1	True	AATGAA	-32
PB.9246.14	chr5	+	2850	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	265	-576	-25	-131	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	15	NA	TRUE	NA	NA	NA	C	coding	706	2121	47	2167	50.0	-17	True	ACTAAA	-41
PB.9246.15	chr5	+	6012	20	novel_not_in_catalog	KIF2A	novel	2539	20	NA	NA	-17	3102	any annotated donor/acceptor	FALSE	canonical	1	2105	junction_19	152966.04157864	NA	3	1	TRUE	NA	NA	NA	C	coding	685	2058	39	2096	95.0	-9	True	NA	NA
PB.9246.12	chr5	+	3068	21	novel_not_in_catalog	KIF2A	novel	2539	20	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	149644.35648759862	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	268	2331	35.0	0	True	AATAAA	-17
PB.7590.10	chr22	+	2796	4	novel_not_in_catalog	CECR7	novel	2726	4	NA	NA	-22	-3	any annotated donor/acceptor	FALSE	canonical	1	3488	junction_3	22185.9295550631	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.9246.10	chr5	+	2503	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-18	4	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	2	NA	TRUE	NA	NA	NA	C	coding	687	2064	286	2349	25.0	-3	True	NA	NA
PB.9246.11	chr5	+	4060	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	215	-1736	-75	1029	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	97	2217	35.0	-67	False	AATAAA	-35
PB.4322.1	chr16	+	1381	11	full-splice_match	LCMT1	ENST00000399069.7	1368	11	-17	4	-17	1	multi-exon	FALSE	canonical	1	292988	junction_1	118084.80723535099	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	173	1177	10.0	3	True	AATAAA	-15
PB.4322.2	chr16	+	1347	11	novel_not_in_catalog	LCMT1	novel	1368	11	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	10847	junction_6	191219.9497748339	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	745	1140	5.0	-9	True	AATAAA	-18
PB.10830.15	chr7	+	2144	9	full-splice_match	IRF5	ENST00000357234.9	1680	9	83	-547	32	-9	multi-exon	FALSE	canonical	1	69172	junction_1	91663.32865676165	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	39	1583	40.0	3	True	AATGAA	-5
PB.8640.4	chr3	+	3714	16	full-splice_match	LMLN	ENST00000330198.8	7043	16	31	3298	9	1411	multi-exon	FALSE	canonical	1	10193	junction_11	8379.852495121857	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	16	1959	85.0	-2	True	NA	NA
PB.5237.1	chr17	+	3073	6	full-splice_match	SLC16A5	ENST00000450736.6	2051	6	-1022	0	-25	0	multi-exon	FALSE	canonical	1	43918	junction_5	25617.845105316723	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	1438	2955	60.0	-14	True	AATAAA	-11
PB.5237.2	chr17	+	1972	7	novel_not_in_catalog	SLC16A5	novel	2019	7	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	40417.38344828318	NA	1	1	TRUE	NA	NA	NA	C	coding	509	1530	326	1855	60.0	-8	True	AATAAA	-10
PB.7951.1	chr3	-	4814	15	novel_in_catalog	XPC	novel	3832	16	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	1	190914	junction_14	51106.878295262126	NA	1	NA	TRUE	NA	NA	NA	C	coding	929	2790	71	2860	30.0	-10	False	AATAAA	-11
PB.1109.18	chr1	+	2806	15	full-splice_match	DTL	ENST00000366991.4	4573	15	196	1571	-73	-1159	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	119	2311	5.0	-20	True	AATACA	-14
PB.8135.2	chr3	-	2083	1	novel_in_catalog	RASSF1	novel	1757	5	NA	NA	47	1042	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	135	408	129	536	100.0	-23	True	NA	NA
PB.6613.13	chr2	-	3451	1	novel_in_catalog	EIF2AK3	novel	4646	17	NA	NA	117	-33190	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	186	497	85.0	-4	True	NA	NA
PB.8135.1	chr3	-	1772	5	full-splice_match	RASSF1	ENST00000327761.7	1757	5	-18	3	-18	1	multi-exon	FALSE	canonical	1	175114	junction_4	177101.64364355855	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	194	976	20.0	8249	False	AATAAA	-17
PB.6576.1	chr2	+	4101	13	full-splice_match	SEMA4F	ENST00000611975.4	6007	13	111	1795	-23	-1	multi-exon	FALSE	canonical	1	12951	junction_3	22080.59106810021	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	39	2252	40.0	-14	False	AATAAA	-18
PB.11092.3	chr8	+	3311	18	full-splice_match	DDHD2	ENST00000397166.6	4921	18	245	1365	-83	567	multi-exon	FALSE	canonical	1	97911	junction_1	87955.87094076266	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	281	2416	35.0	-20	True	AATAAA	-26
PB.10421.6	chr7	-	2715	5	full-splice_match	MACC1	ENST00000332878.8	2994	5	-76	355	-76	-63	multi-exon	FALSE	canonical	1	11876	junction_4	26768.339707338968	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2523	191	2713	25.0	4	True	AGTAAA	-19
PB.10421.4	chr7	-	2714	6	novel_not_in_catalog	MACC1	novel	9159	7	NA	NA	-21420	-30	any annotated donor/acceptor	TRUE	canonical	1	27	junction_5	30878.259397835234	NA	1	1	TRUE	NA	NA	NA	C	coding	852	2556	157	2712	30.0	1	True	NA	NA
PB.10421.5	chr7	-	2873	7	novel_in_catalog	MACC1	novel	9159	7	NA	NA	-19	-60	combination_of_known_junctions	FALSE	canonical	1	9661	junction_5	30396.1148033575	NA	9	2	TRUE	NA	NA	NA	C	coding	842	2526	346	2871	20.0	-4	True	AGTAAA	-22
PB.10421.2	chr7	-	3009	6	novel_in_catalog	MACC1	novel	9159	7	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	12671	junction_5	27190.886409972	NA	2	NA	TRUE	NA	NA	NA	C	coding	852	2559	133	2691	65.0	-3	True	AATACA	-30
PB.10421.3	chr7	-	2800	6	novel_in_catalog	MACC1	novel	9159	7	NA	NA	-94	-61	no_combination_of_known_junctions	FALSE	canonical	1	7104	junction_5	28763.105961630776	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2526	274	2799	20.0	-14	True	AGTAAA	-21
PB.10421.1	chr7	-	4988	6	novel_in_catalog	AC005062.1	novel	551	6	NA	NA	-76951	-4775	no_combination_of_known_junctions	FALSE	canonical	1	12671	junction_5	27190.886409972	NA	4	NA	TRUE	NA	NA	NA	A	coding	852	2559	183	2741	85.0	2695	False	NA	NA
PB.6576.5	chr2	+	4069	12	full-splice_match	SEMA4F	ENST00000446927.5	2672	12	-87	-1310	-2	-3	multi-exon	FALSE	canonical	1	6825	junction_3	23125.113204994297	NA	3	NA	TRUE	NA	NA	NA	C	coding	382	1149	1074	2222	35.0	-5	True	AATAAA	-16
PB.6613.12	chr2	-	5605	1	novel_in_catalog	EIF2AK3	novel	4646	17	NA	NA	57	-31096	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	103	312	246	557	90.0	625	False	NA	NA
PB.6576.4	chr2	+	2976	14	full-splice_match	SEMA4F	ENST00000357877.6	4312	14	39	1297	-10	16	multi-exon	FALSE	canonical	1	22115	junction_4	21840.745144916807	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	111	2423	30.0	-86	False	AATACA	-11
PB.11092.2	chr8	+	4475	17	novel_in_catalog	DDHD2	novel	568	4	NA	NA	-83	-11	no_combination_of_known_junctions	FALSE	canonical	1	3772	junction_9	114835.49879268538	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	281	2293	45.0	-20	True	AGTAAA	-5
PB.2964.2	chr12	-	1822	6	full-splice_match	OASL	ENST00000257570.9	3266	6	263	1181	-32	0	multi-exon	FALSE	canonical	1	139337	junction_4	32755.54273096387	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	9	1553	15.0	-3	True	NA	NA
PB.2964.1	chr12	-	1578	5	full-splice_match	OASL	ENST00000339275.9	1492	5	179	-265	-30	0	multi-exon	FALSE	canonical	1	34667	junction_2	70341.86293381773	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	7	774	15.0	-1	True	NA	NA
PB.9842.4	chr6	+	3513	8	novel_in_catalog	TRIM39	novel	1003	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	6178	junction_1	38467.73398205677	NA	1	1	TRUE	NA	NA	NA	C	coding	488	1467	578	2044	15.0	2	True	NA	NA
PB.10189.5	chr6	-	2455	8	novel_in_catalog	MCM9	novel	5101	13	NA	NA	28	-3	combination_of_known_junctions	FALSE	canonical	1	15900	junction_7	23871.221537958332	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	256	1431	25.0	-8	True	AATAAA	-14
PB.8734.26	chr4	-	2660	2	full-splice_match	TLR10	ENST00000361424.6	3484	2	0	824	0	62	multi-exon	FALSE	canonical	1	21404	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	175	2568	55.0	-1	True	NA	NA
PB.7684.5	chr22	+	2364	16	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	17283	junction_8	718202.46759159	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	69	1055	5.0	1	True	AATAAA	-24
PB.11434.2	chr9	-	1480	3	novel_not_in_catalog	CDC37L1-DT	novel	235	2	NA	NA	14	-3	any annotated donor/acceptor	FALSE	canonical	1	3565	junction_1	7510.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.6455.8	chr2	-	2441	1	incomplete-splice_match	MCFD2	ENST00000444761.6	4169	3	37537	8	4754	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-12
PB.6914.2	chr2	+	2192	2	intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	6435	False	NA	NA
PB.6914.1	chr2	+	2721	1	intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	6433	False	NA	NA
PB.867.1	chr1	-	2418	5	incomplete-splice_match	NECTIN4	ENST00000368012.3	3502	9	14770	0	-571	0	5prime_fragment	FALSE	canonical	1	50464	junction_1	24033.85950071274	NA	1	NA	TRUE	NA	NA	NA	A	coding	140	423	330	752	0.0	-62	True	AATAAA	-17
PB.7238.1	chr20	-	3500	13	novel_in_catalog	CDK5RAP1	novel	974	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	134107	junction_10	106547.25899675797	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	117	1406	10.0	-5	True	ATTAAA	-20
PB.8100.6	chr3	+	1744	2	incomplete-splice_match	P4HTM	ENST00000475629.5	651	3	-96	7577	-20	-22	3prime_fragment	FALSE	canonical	1	391481	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	16	510	75.0	1	True	NA	NA
PB.7238.3	chr20	-	2309	16	novel_not_in_catalog	CDK5RAP1	novel	974	6	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	342	junction_15	151441.56991350383	NA	3	2	TRUE	NA	NA	NA	C	coding	477	1434	674	2107	15.0	0	True	ATTAAA	-19
PB.7238.2	chr20	-	3284	12	novel_in_catalog	CDK5RAP1	novel	974	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	18308	junction_7	131687.10449382258	NA	2	NA	TRUE	NA	NA	NA	C	coding	222	669	2414	3082	15.0	-1	True	ATTAAA	-19
PB.7238.5	chr20	-	2341	1	novel_in_catalog	CDK5RAP1	novel	2122	14	NA	NA	-2	-19666	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	AGTAAA	-39
PB.7238.4	chr20	-	2093	14	full-splice_match	CDK5RAP1	ENST00000346416.6	2122	14	27	2	-11	0	multi-exon	FALSE	canonical	1	134107	junction_11	103948.86479674776	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	128	1891	15.0	-16	True	ATTAAA	-19
PB.8100.7	chr3	+	4575	6	novel_in_catalog	P4HTM	novel	2127	9	NA	NA	-17	15	intron_retention	FALSE	canonical	1	391481	junction_1	59686.848296756296	NA	6	NA	TRUE	NA	NA	NA	C	coding	299	900	13	912	30.0	4	True	AATAAA	-32
PB.8100.4	chr3	+	2658	7	novel_in_catalog	P4HTM	novel	2127	9	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	341102	junction_5	38970.40641592313	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	17	1288	25.0	0	True	AATAAA	-16
PB.3529.1	chr14	-	5038	7	full-splice_match	SLC8A3	ENST00000356921.6	5250	7	209	3	209	0	multi-exon	FALSE	canonical	1	8093	junction_6	7891.202240822089	NA	2	NA	TRUE	NA	NA	NA	A	coding	921	2766	546	3311	20.0	566	False	AATAAA	-22
PB.9108.2	chr4	+	1487	6	novel_not_in_catalog	LINC01060	novel	716	5	NA	NA	8186	561	any annotated donor/acceptor	FALSE	canonical	1	213	junction_1	3437.691236862322	NA	0	NA	TRUE	NA	NA	NA	B	coding	112	339	111	449	35.0	8115	False	TATAAA	-11
PB.3528.12	chr14	+	1296	8	full-splice_match	SRSF5	ENST00000394366.6	1638	8	48	294	-16	25	multi-exon	FALSE	canonical	1	544887	junction_1	1536627.314688402	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	260	1078	25.0	-1	True	ATTAAA	-25
PB.2255.8	chr11	-	3120	3	novel_not_in_catalog	MSANTD4	novel	1008	3	NA	NA	8	-81	intron_retention	FALSE	canonical	1	6981	junction_2	121810.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	531	1568	25.0	20	True	AATATA	-16
PB.2255.4	chr11	-	3297	4	novel_not_in_catalog	MSANTD4	novel	1008	3	NA	NA	10	-25	intron_retention	FALSE	canonical	1	1148	junction_3	114426.40976045113	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	652	1689	45.0	-1	True	AATAAA	-15
PB.2255.7	chr11	-	2919	4	novel_not_in_catalog	MSANTD4	novel	1008	3	NA	NA	4	-27	intron_retention	FALSE	canonical	1	1320	junction_3	114382.42082107237	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	276	1313	45.0	16	True	AATAAA	-13
PB.2255.6	chr11	-	2805	3	full-splice_match	MSANTD4	ENST00000530788.1	948	3	148	-2005	-5	-77	multi-exon	FALSE	canonical	1	42080	junction_2	104261.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	212	1249	30.0	-16	True	AATATA	-20
PB.2255.1	chr11	-	3153	4	novel_in_catalog	MSANTD4	novel	1008	3	NA	NA	-4	958	intron_retention	FALSE	canonical	1	3552	junction_1	108525.23197036817	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	211	1467	15.0	-15	True	NA	NA
PB.2255.3	chr11	-	4000	3	full-splice_match	MSANTD4	ENST00000301919.8	4087	3	4	83	4	-83	multi-exon	FALSE	canonical	1	24761	junction_2	112920.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	1413	2450	30.0	16	True	AATATA	-14
PB.2255.2	chr11	-	4160	4	novel_not_in_catalog	MSANTD4	novel	1008	3	NA	NA	-2	-25	intron_retention	FALSE	canonical	1	6020	junction_3	113196.25952595194	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	1515	2552	45.0	10	True	AATAAA	-15
PB.570.2	chr1	+	2484	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	3	5411	3	1344	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	185	1315	35.0	-41	True	AATACA	-18
PB.9157.21	chr5	-	2803	21	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	0	349	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	107367.63877736857	NA	5	1	TRUE	NA	NA	NA	B	coding	726	2181	452	2632	30.0	5	True	CATAAA	-11
PB.9157.22	chr5	-	2551	19	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-1	-22774	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	108242.44716421912	NA	0	NA	TRUE	NA	NA	NA	B	coding	650	1953	457	2409	40.0	0	True	AATAAA	-41
PB.570.1	chr1	+	2972	11	full-splice_match	SLC30A7	ENST00000357650.8	1281	11	-177	-1514	1	1514	multi-exon	FALSE	canonical	1	137600	junction_8	30698.039475510483	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	187	1317	15.0	-43	True	AATAAA	-35
PB.570.6	chr1	+	5882	11	full-splice_match	SLC30A7	ENST00000357650.8	1281	11	-163	-4438	15	-2317	multi-exon	FALSE	canonical	1	137600	junction_8	30698.039475510483	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	173	1303	100.0	-29	True	AATACA	-19
PB.570.7	chr1	+	2465	11	full-splice_match	SLC30A7	ENST00000357650.8	1281	11	-163	-1021	15	1021	multi-exon	FALSE	canonical	1	137600	junction_8	30698.039475510483	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	173	1303	50.0	-29	True	AATAAA	-22
PB.570.4	chr1	+	2722	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	20	5156	20	1599	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	168	1298	50.0	-24	True	AATACA	-17
PB.570.5	chr1	+	5056	11	full-splice_match	SLC30A7	ENST00000357650.8	1281	11	-35	-3740	-35	-3015	multi-exon	FALSE	canonical	1	137600	junction_8	30698.039475510483	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	45	1175	30.0	0	True	AATAAA	-40
PB.570.8	chr1	+	2147	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	16	5735	16	1020	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	172	1302	55.0	-28	True	AATAAA	-21
PB.8100.1	chr3	+	2319	1	full-splice_match	P4HTM	ENST00000609406.1	1968	1	-373	22	0	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	191	576	369	944	75.0	4	True	NA	NA
PB.2574.1	chr12	+	3697	1	full-splice_match	AC024257.3	ENST00000595310.1	3645	1	-30	-22	0	22	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	13	NA	NA	NA	NA	NA	A	coding	131	396	41	436	50.0	-4	True	AATAAA	-36
PB.996.4	chr1	+	2705	11	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-180	256657	-180	-43853	3prime_fragment	FALSE	canonical	1	26732	junction_1	3861.476920816697	NA	2	NA	TRUE	NA	NA	NA	C	coding	614	1845	410	2254	25.0	0	True	AATAAA	-18
PB.1058.9	chr1	-	2816	14	full-splice_match	RBBP5	ENST00000264515.10	4404	14	40	1548	-9	-1548	multi-exon	FALSE	canonical	1	104963	junction_1	52188.404912524486	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	103	1719	20.0	-1	True	TATAAA	-26
PB.3861.9	chr15	-	2850	10	novel_in_catalog	GABPB1	novel	4816	9	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	1371	junction_2	129369.82818872508	NA	3	NA	TRUE	NA	NA	NA	C	coding	365	1098	214	1311	30.0	0	True	ATTAAA	-13
PB.3861.8	chr15	-	2543	8	novel_in_catalog	GABPB1	novel	4816	9	NA	NA	-10	5	combination_of_known_junctions	FALSE	canonical	1	7910	junction_5	103240.3123794387	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	180	1169	25.0	-1	True	ATTAAA	-15
PB.6468.11	chr2	-	1527	7	full-splice_match	RTN4	ENST00000317610.11	2333	7	183	623	15	2	multi-exon	FALSE	canonical	1	1030166	junction_6	1616799.530346441	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	62	1183	80.0	-5	True	NA	NA
PB.6468.10	chr2	-	1637	6	novel_in_catalog	RTN4	novel	1898	7	NA	NA	3	2	intron_retention	FALSE	canonical	1	34916	junction_3	2091038.3472932868	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	242	1201	80.0	-7	True	NA	NA
PB.5210.24	chr17	+	4245	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	3	8	0	0	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	126	1271	35.0	0	True	AATAAA	-9
PB.5210.25	chr17	+	4657	1	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98710	-7843	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	20	True	AATAAA	-16
PB.5210.26	chr17	+	3703	11	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98989	7809	no_combination_of_known_junctions	FALSE	canonical	1	52198	junction_1	704778.3732780397	NA	1	NA	TRUE	NA	NA	NA	B	coding	381	1146	249	1394	45.0	1	True	AATAAA	-17
PB.3861.6	chr15	-	2784	11	novel_not_in_catalog	GABPB1	novel	4816	9	NA	NA	1	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	133335.40978659794	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	334	1410	25.0	0	True	ATTAAA	-15
PB.5210.20	chr17	+	3427	12	novel_not_in_catalog	AC007780.1	novel	719	6	NA	NA	98682	7816	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	762544.2871079198	NA	4	1	TRUE	NA	NA	NA	B	coding	381	1146	134	1279	30.0	-8	True	AATAAA	-24
PB.5210.21	chr17	+	3264	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	48	944	8	-272	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	81	1226	30.0	45	True	ATTAAA	-41
PB.3861.3	chr15	-	2674	9	full-splice_match	GABPB1	ENST00000380877.7	4816	9	282	1860	-2	11	multi-exon	FALSE	canonical	1	127281	junction_8	74837.11197984844	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	143	1294	25.0	-9	True	ATTAAA	-21
PB.5210.23	chr17	+	3613	11	full-splice_match	PRKAR1A	ENST00000392711.5	4327	11	49	665	1	-1	multi-exon	FALSE	canonical	1	20648	junction_1	713035.4644261672	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	159	1304	45.0	-2	True	AATAAA	-17
PB.4773.6	chr17	-	4764	13	novel_in_catalog	GAS7	novel	8003	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	38728	junction_10	117910.30444117139	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	343	1386	75.0	-1	True	NA	NA
PB.696.10	chr1	+	4134	13	novel_in_catalog	GPR89B	novel	1934	14	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	817	junction_4	19138.193834399724	NA	1	NA	TRUE	NA	NA	NA	C	coding	129	390	496	885	20.0	0	True	ATTAAA	-13
PB.4773.4	chr17	-	4988	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	-48	-1405	-48	0	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	360	1610	75.0	33	False	NA	NA
PB.4773.5	chr17	-	4824	14	novel_in_catalog	GAS7	novel	8003	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	1838	junction_13	101582.61790024638	NA	14	2	TRUE	NA	NA	NA	C	coding	412	1239	208	1446	75.0	7	True	NA	NA
PB.4773.2	chr17	-	8087	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	37	-4589	-9	-57	multi-exon	TRUE	canonical	1	39836	junction_13	94000.75847679643	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	275	1525	30.0	-2	True	ATTAAA	-22
PB.4773.3	chr17	-	2584	1	incomplete-splice_match	GAS7	ENST00000437099.6	8003	14	113035	58	11535	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	2166	False	ATTAAA	-21
PB.4773.1	chr17	-	8264	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7129	-59	any annotated donor/acceptor	FALSE	canonical	1	19749	junction_13	97951.51164958032	NA	2	NA	TRUE	NA	NA	NA	C	coding	441	1326	379	1704	25.0	7096	False	ATTAAA	-20
PB.7562.3	chr21	-	2975	16	novel_in_catalog	ITGB2	novel	2125	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	26322	junction_14	331504.4044130669	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	461	2563	20.0	7883	False	AATAAA	-24
PB.8570.2	chr3	-	4536	2	full-splice_match	C3orf70	ENST00000335012.2	5901	2	6	1359	6	-1359	multi-exon	FALSE	canonical	1	30523	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	250	753	186	938	85.0	46	True	NA	NA
PB.7562.1	chr21	-	4312	15	novel_in_catalog	ITGB2	novel	2125	7	NA	NA	-14	4	intron_retention	FALSE	canonical	1	733850	junction_9	200713.59945983344	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	158	1450	10.0	-1	True	AATAAA	-31
PB.7562.5	chr21	-	2837	16	novel_in_catalog	ITGB2	novel	2125	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	3384	junction_15	332306.4329628035	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	116	2425	20.0	7077	False	AATAAA	-24
PB.4773.9	chr17	-	4941	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7270	0	any annotated donor/acceptor	FALSE	canonical	1	19749	junction_13	97951.51164958032	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	238	1563	75.0	7237	False	NA	NA
PB.4252.23	chr16	-	2820	22	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	8366	junction_21	123983.60615501474	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2469	351	2819	75.0	-9	True	NA	NA
PB.4252.22	chr16	-	2613	20	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	3	30	any annotated donor/acceptor	FALSE	canonical	1	1810	junction_5	135537.4337974732	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	155	1279	65.0	-10	True	AAAAAG	-22
PB.4252.21	chr16	-	2649	21	incomplete-splice_match	ZC3H7A	ENST00000355758.8	3825	23	-1	5743	-1	0	3prime_fragment	FALSE	canonical	1	93172	junction_20	92614.50406448224	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2469	180	2648	75.0	-35	True	NA	NA
PB.4252.20	chr16	-	2750	21	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	1	8480	junction_20	105041.31884925095	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2469	281	2749	75.0	525	False	NA	NA
PB.5229.1	chr17	+	2002	6	full-splice_match	SLC9A3R1	ENST00000262613.9	1969	6	-27	-6	-27	6	multi-exon	FALSE	canonical	1	892974	junction_1	338094.54674430937	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	223	1299	5.0	-3	True	NA	NA
PB.12322.1	chrX	+	1549	8	full-splice_match	NSDHL	ENST00000370274.7	1929	8	14	366	14	0	multi-exon	FALSE	canonical	1	332408	junction_1	43950.36404483437	NA	1	NA	TRUE	NA	NA	NA	A	coding	373	1122	181	1302	5.0	0	True	NA	NA
PB.4252.25	chr16	-	2451	19	incomplete-splice_match	ZC3H7A	ENST00000355758.8	3825	23	18	10848	-3	514	3prime_fragment	FALSE	canonical	1	93172	junction_18	93312.36271085465	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2289	161	2449	50.0	-16	True	NA	NA
PB.4252.24	chr16	-	2724	21	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-134	0	any annotated donor/acceptor	FALSE	canonical	1	5082	junction_20	105576.7276636286	NA	2	NA	TRUE	NA	NA	NA	C	coding	823	2469	255	2723	75.0	948	False	NA	NA
PB.7202.1	chr20	+	2836	1	genic	AL035258.1	novel	NA	NA	NA	NA	-111	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-19	True	AATAAA	-25
PB.4068.1	chr15	+	2289	6	novel_not_in_catalog	AC013391.2	novel	501	2	NA	NA	56936	668	any annotated donor/acceptor	FALSE	canonical	1	499	junction_5	29638.54079404045	NA	0	NA	TRUE	NA	NA	NA	B	coding	518	1557	129	1685	70.0	-10	True	NA	NA
PB.4068.3	chr15	+	6624	21	novel_in_catalog	AC013391.2	novel	501	2	NA	NA	56978	36064	no_combination_of_known_junctions	FALSE	canonical	1	2542	junction_20	22067.868570559778	NA	1	NA	TRUE	NA	NA	NA	B	coding	1867	5604	87	5690	20.0	2	True	ATTAAA	-18
PB.4068.2	chr15	+	6787	22	full-splice_match	TICRR	ENST00000268138.11	6775	22	-16	4	-16	-4	multi-exon	FALSE	canonical	1	42667	junction_8	14330.149594204877	NA	1	NA	TRUE	NA	NA	NA	A	coding	1910	5733	122	5854	20.0	-3	True	ATTAAA	-17
PB.6306.3	chr2	-	2304	7	novel_not_in_catalog	YWHAQ	novel	2216	5	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	177	junction_4	1305885.023002589	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	160	582	35.0	-49	True	AATAAA	-20
PB.2115.2	chr11	-	1851	4	full-splice_match	FAM86C2P	ENST00000529253.5	1857	4	-3	9	-1	8	multi-exon	FALSE	canonical	1	4410	junction_2	11788.903209751486	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	25	420	35.0	NA	False	NA	NA
PB.1058.7	chr1	-	3222	14	full-splice_match	RBBP5	ENST00000367164.1	4290	14	-5	1073	-5	-1073	multi-exon	FALSE	canonical	1	36728	junction_1	63058.95237749154	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	148	1650	85.0	-18	False	NA	NA
PB.2115.1	chr11	-	1948	5	novel_in_catalog	FAM86C2P	novel	1814	3	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	1	3764	junction_2	11106.267045569362	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	15	512	30.0	NA	False	NA	NA
PB.2249.4	chr11	-	4988	1	novel_in_catalog	DCUN1D5	novel	1337	8	NA	NA	1	2082	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	3	314	95.0	-17	True	NA	NA
PB.2249.2	chr11	-	3822	8	full-splice_match	DCUN1D5	ENST00000260247.9	1337	8	31	-2516	5	2513	multi-exon	FALSE	canonical	1	472639	junction_4	136311.62802406636	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	313	1026	35.0	21	False	GATAAA	-12
PB.2249.3	chr11	-	1281	8	full-splice_match	DCUN1D5	ENST00000260247.9	1337	8	52	4	-2	-4	multi-exon	FALSE	canonical	1	472639	junction_4	136311.62802406636	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	292	1005	30.0	-4	True	AATAAA	-25
PB.2249.1	chr11	-	4405	8	full-splice_match	DCUN1D5	ENST00000260247.9	1337	8	31	-3099	5	3096	multi-exon	FALSE	canonical	1	472639	junction_4	136311.62802406636	NA	7	NA	TRUE	NA	NA	NA	C	coding	237	714	313	1026	85.0	21	False	AATAAA	-15
PB.11101.2	chr8	+	3710	21	novel_in_catalog	ADAM9	novel	2053	5	NA	NA	47	-93	no_combination_of_known_junctions	FALSE	canonical	1	14890	junction_14	313839.35806737177	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	149	1864	30.0	-57	True	AATAAA	-24
PB.8812.20	chr4	-	1530	11	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	7	40	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	487454.60186894325	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	64	1302	25.0	-1	True	AATAAA	-20
PB.11849.5	chr9	+	4310	26	full-splice_match	USP20	ENST00000372429.7	4315	26	6	-1	6	1	multi-exon	FALSE	canonical	1	93010	junction_1	54978.569842235804	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	177	2921	15.0	-6	True	AATAAA	-27
PB.7951.6	chr3	-	3628	16	novel_in_catalog	XPC	novel	3832	16	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	1220	junction_15	87888.5422206002	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	34	2838	30.0	-1	True	AATAAA	-10
PB.7116.2	chr2	-	1048	5	full-splice_match	DTYMK	ENST00000305784.6	1232	5	174	10	-36	-5	multi-exon	FALSE	canonical	1	522604	junction_2	124681.88975423617	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	35	673	30.0	-14	True	AGTAAA	-10
PB.11849.2	chr9	+	4489	25	full-splice_match	USP20	ENST00000315480.8	4458	25	-23	-8	1	-2	multi-exon	FALSE	canonical	1	93010	junction_1	56111.6603620103	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	182	2926	15.0	-11	True	AATAAA	-24
PB.11849.1	chr9	+	4420	26	novel_in_catalog	USP20	novel	590	3	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	42389	junction_25	63303.49202268071	NA	3	1	TRUE	NA	NA	NA	C	coding	914	2745	201	2945	20.0	-2	True	AATAAA	-25
PB.7116.1	chr2	-	973	5	novel_not_in_catalog	DTYMK	novel	1232	5	NA	NA	-25	-2	any annotated donor/acceptor	FALSE	canonical	1	27294	junction_2	314147.3505979121	NA	11	2	TRUE	NA	NA	NA	C	coding	188	567	24	590	15.0	-3	True	AGTAAA	-18
PB.1058.6	chr1	-	3235	14	novel_not_in_catalog	RBBP5	novel	4404	14	NA	NA	-9	-1073	any annotated donor/acceptor	FALSE	canonical	1	7140	junction_12	70674.93117391675	NA	2	NA	TRUE	NA	NA	NA	C	coding	411	1236	428	1663	85.0	-1	True	NA	NA
PB.12209.1	chrX	+	5762	21	full-splice_match	TBC1D8B	ENST00000357242.9	5717	21	-29	-16	-29	16	multi-exon	TRUE	canonical	1	22430	junction_1	6836.523425689405	NA	0	NA	TRUE	NA	NA	NA	C	coding	1120	3363	204	3566	45.0	-86	False	AATAAA	-34
PB.12209.2	chrX	+	4692	21	full-splice_match	TBC1D8B	ENST00000357242.9	5717	21	-13	1038	-13	990	multi-exon	FALSE	canonical	1	22430	junction_1	6836.523425689405	NA	0	NA	TRUE	NA	NA	NA	C	coding	1120	3363	188	3550	80.0	-70	True	NA	NA
PB.12209.3	chrX	+	2211	7	full-splice_match	TBC1D8B	ENST00000481617.6	4098	7	-26	1913	-1	-1913	multi-exon	FALSE	canonical	1	22430	junction_1	9836.06728660732	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	176	1435	60.0	-58	True	NA	NA
PB.12209.4	chrX	+	2077	7	full-splice_match	TBC1D8B	ENST00000481617.6	4098	7	-12	2033	4	-2033	multi-exon	FALSE	canonical	1	22430	junction_1	9836.06728660732	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	162	1421	75.0	-44	True	NA	NA
PB.12209.5	chrX	+	1882	6	incomplete-splice_match	TBC1D8B	ENST00000481617.6	4098	7	-9	3157	7	-3157	3prime_fragment	FALSE	canonical	1	22430	junction_1	10470.587356972865	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	159	1202	25.0	-41	True	AATAAA	-20
PB.12209.6	chrX	+	4106	7	full-splice_match	TBC1D8B	ENST00000481617.6	4098	7	-8	0	8	0	multi-exon	FALSE	canonical	1	22430	junction_1	9836.06728660732	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	158	1417	70.0	-40	True	NA	NA
PB.12209.7	chrX	+	3685	21	full-splice_match	TBC1D8B	ENST00000357242.9	5717	21	34	1998	9	30	multi-exon	FALSE	canonical	1	22430	junction_1	6836.523425689405	NA	4	NA	TRUE	NA	NA	NA	C	coding	1120	3363	141	3503	80.0	-23	True	NA	NA
PB.4143.1	chr16	+	4431	18	novel_in_catalog	CHTF18	novel	3555	24	NA	NA	-2	1	intron_retention	FALSE	canonical	1	111752	junction_5	83372.09210869855	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	2852	4333	20.0	-4	True	TATAAA	-22
PB.12314.2	chrX	-	1525	4	full-splice_match	MAGEA10	ENST00000370323.8	2628	4	-25	1128	0	630	multi-exon	FALSE	canonical	1	13282	junction_2	6258.840432185147	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	343	1452	95.0	-23	True	TTTAAA	-44
PB.12314.1	chrX	-	1597	5	full-splice_match	MAGEA10	ENST00000427322.6	901	5	2	-698	2	630	multi-exon	FALSE	canonical	1	6115	junction_2	9626.076783923967	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	415	1524	95.0	-4	True	TTTAAA	-44
PB.4143.2	chr16	+	4339	19	novel_in_catalog	CHTF18	novel	3555	24	NA	NA	-2	0	intron_retention	FALSE	canonical	1	111752	junction_5	82789.43537510323	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	2569	4242	25.0	-4	True	TATAAA	-21
PB.4143.5	chr16	+	3089	22	full-splice_match	CHTF18	ENST00000262315.13	3090	22	-1	2	-1	0	multi-exon	FALSE	canonical	1	96995	junction_8	85932.812402832	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	65	2992	25.0	-3	True	TATAAA	-21
PB.4143.4	chr16	+	2864	21	novel_in_catalog	CHTF18	novel	3555	24	NA	NA	-2	-1	no_combination_of_known_junctions	TRUE	canonical	1	19078	junction_15	95537.87080026172	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	66	2768	25.0	-4	True	TATAAA	-20
PB.4143.7	chr16	+	3564	21	novel_in_catalog	CHTF18	novel	3555	24	NA	NA	1	0	intron_retention	FALSE	canonical	1	111752	junction_5	84435.61153652825	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	1731	3467	25.0	2	True	TATAAA	-21
PB.4143.6	chr16	+	3481	20	novel_in_catalog	CHTF18	novel	3555	24	NA	NA	0	-1	intron_retention	FALSE	canonical	1	19028	junction_7	92431.35174433682	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	1712	3385	25.0	0	True	TATAAA	-20
PB.1058.5	chr1	-	3319	14	full-splice_match	RBBP5	ENST00000264515.10	4404	14	12	1073	12	-1073	multi-exon	FALSE	canonical	1	104963	junction_1	52188.404912524486	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	131	1747	85.0	-1	True	NA	NA
PB.9575.8	chr5	+	2118	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	294	2318	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	32	613	45.0	1	True	NA	NA
PB.3634.1	chr14	-	4678	11	full-splice_match	BTBD7	ENST00000334746.9	8430	11	-32	3784	-14	699	multi-exon	FALSE	canonical	1	35618	junction_9	33963.64107527342	NA	1	NA	TRUE	NA	NA	NA	C	coding	1132	3399	341	3739	90.0	-18	True	NA	NA
PB.3634.3	chr14	-	2556	4	full-splice_match	BTBD7	ENST00000298896.7	2621	4	63	2	-8	-2	multi-exon	FALSE	canonical	1	35618	junction_2	2329.8819712594886	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	317	1549	15.0	6	True	NA	NA
PB.9152.4	chr5	+	2867	1	incomplete-splice_match	OTULIN	ENST00000284274.4	7800	7	30951	1146	14123	-1146	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	176	531	1336	1866	75.0	NA	False	GGGGCT	-44
PB.8993.2	chr4	+	2855	2	full-splice_match	RAB33B	ENST00000305626.5	4562	2	308	1399	308	-1399	multi-exon	FALSE	canonical	1	146785	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	82	771	30.0	-33	True	AATAAA	-23
PB.6687.14	chr2	-	2442	1	novel_in_catalog	BUB1	novel	3576	24	NA	NA	0	-1506	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.3761.1	chr15	-	2055	9	full-splice_match	DPH6	ENST00000256538.8	2099	9	-42	86	-17	-86	multi-exon	FALSE	canonical	1	93773	junction_1	29593.51199059517	NA	0	NA	TRUE	NA	NA	NA	A	coding	267	804	70	873	20.0	-46	False	NA	NA
PB.6687.12	chr2	-	3282	18	incomplete-splice_match	BUB1	ENST00000466333.5	2501	20	-36	7422	-1	-719	3prime_fragment	FALSE	canonical	1	297598	junction_16	55614.84575618662	NA	1	NA	TRUE	NA	NA	NA	C	coding	744	2235	70	2304	35.0	-2	True	AATAAA	-28
PB.9152.1	chr5	+	2669	7	full-splice_match	OTULIN	ENST00000284274.4	7800	7	-59	5190	25	1121	multi-exon	FALSE	canonical	1	96239	junction_1	49472.74484810354	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	153	1196	40.0	-29	True	ATTAAA	-21
PB.5558.8	chr19	+	2932	14	incomplete-splice_match	ARHGAP45	ENST00000543365.5	3750	22	3575	0	1213	0	5prime_fragment	FALSE	canonical	1	327350	junction_1	92333.65675513532	NA	2	NA	TRUE	NA	NA	NA	C	coding	674	2025	286	2310	10.0	-8086	False	AATAAA	-16
PB.4052.1	chr15	-	2262	1	antisense	novelGene_PDE8A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.5558.6	chr19	+	4086	23	full-splice_match	ARHGAP45	ENST00000586866.5	4120	23	34	0	34	0	multi-exon	FALSE	canonical	1	14251	junction_1	143596.54506908185	NA	1	NA	TRUE	NA	NA	NA	C	coding	1140	3423	42	3464	10.0	-9864	False	AATAAA	-16
PB.5558.7	chr19	+	3647	22	incomplete-splice_match	ARHGAP45	ENST00000586866.5	4120	23	1210	2	1210	0	5prime_fragment	FALSE	canonical	1	254153	junction_5	110104.24948661761	NA	12	NA	TRUE	NA	NA	NA	C	coding	976	2931	97	3027	5.0	-8688	False	AATAAA	-14
PB.5558.4	chr19	+	4061	22	novel_in_catalog	ARHGAP45	novel	4184	23	NA	NA	-20	0	no_combination_of_known_junctions	FALSE	canonical	1	725	junction_9	153406.048834805	NA	0	NA	TRUE	NA	NA	NA	C	coding	1109	3330	110	3439	10.0	-20	True	AATAAA	-16
PB.5558.5	chr19	+	3803	22	novel_in_catalog	ARHGAP45	novel	4184	23	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	73	junction_1	142710.27079432816	NA	5	NA	TRUE	NA	NA	NA	C	coding	976	2931	251	3181	10.0	-9912	False	AATAAA	-16
PB.5558.2	chr19	+	5467	23	full-splice_match	ARHGAP45	ENST00000313093.6	4273	23	7	-1201	7	1201	multi-exon	FALSE	canonical	1	239724	junction_1	117859.48769178073	NA	3	NA	TRUE	NA	NA	NA	C	coding	1136	3411	234	3644	35.0	-9	True	AATAAA	-14
PB.5558.3	chr19	+	3993	22	novel_not_in_catalog	ARHGAP45	novel	4184	23	NA	NA	-51	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	153172.35974594305	NA	3	1	TRUE	NA	NA	NA	C	coding	1014	3045	141	3185	5.0	3	True	AATAAA	-15
PB.9917.7	chr6	-	3480	8	novel_in_catalog	RXRB	novel	2846	10	NA	NA	-25	-3	intron_retention	FALSE	canonical	1	186815	junction_7	135212.60490571047	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	268	1335	25.0	2	True	ATTAAA	-14
PB.5558.1	chr19	+	4140	23	full-splice_match	ARHGAP45	ENST00000313093.6	4273	23	133	0	-18	0	multi-exon	FALSE	canonical	1	239724	junction_1	117859.48769178073	NA	0	NA	TRUE	NA	NA	NA	C	coding	1136	3411	108	3518	10.0	-18	True	AATAAA	-16
PB.8993.1	chr4	+	3546	2	full-splice_match	RAB33B	ENST00000305626.5	4562	2	317	699	317	-699	multi-exon	FALSE	canonical	1	146785	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	73	762	30.0	-24	True	AATAAA	-15
PB.1904.9	chr11	+	4795	26	novel_not_in_catalog	TTC17	novel	3648	20	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	128980.40518156235	NA	1	NA	TRUE	NA	NA	NA	C	coding	1141	3426	347	3772	35.0	-7	True	AATAAA	-14
PB.1904.8	chr11	+	2941	16	incomplete-splice_match	TTC17	ENST00000299240.10	3648	20	4	31272	4	9571	3prime_fragment	FALSE	canonical	1	291394	junction_1	56122.78056412466	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	20	2380	20.0	-8	True	AATAAA	-13
PB.970.12	chr1	-	2347	6	full-splice_match	STX6	ENST00000542060.5	4809	6	206	2256	-4	-1929	multi-exon	FALSE	canonical	1	5772	junction_5	135340.23794806926	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	281	745	35.0	-47	True	AATAAA	-15
PB.970.13	chr1	-	1621	8	full-splice_match	STX6	ENST00000258301.5	4851	8	-13	3243	-13	-2929	multi-exon	FALSE	canonical	1	284881	junction_2	32878.787382053575	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	252	1019	25.0	-56	True	GATAAA	-29
PB.1904.5	chr11	+	5691	5	incomplete-splice_match	TTC17	ENST00000299240.10	3648	20	0	49762	0	-1101	intron_retention	FALSE	canonical	1	291394	junction_1	31042.574147249772	NA	3	NA	TRUE	NA	NA	NA	C	coding	232	699	24	722	85.0	-12	True	AAGAAA	-14
PB.1904.4	chr11	+	3286	19	novel_in_catalog	TTC17	novel	3648	20	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	1	27184	junction_16	119460.32942759959	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	24	2723	55.0	-12	True	ATTAAA	-3
PB.1904.7	chr11	+	3655	25	novel_in_catalog	TTC17	novel	3648	20	NA	NA	4	-18	combination_of_known_junctions	FALSE	canonical	1	199596	junction_19	83075.7176207741	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	20	3616	85.0	-8	True	NA	NA
PB.1904.6	chr11	+	4469	24	novel_in_catalog	TTC17	novel	3648	20	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	2076	junction_2	113333.48107345351	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	541	3447	30.0	-9	True	AATAAA	-13
PB.1904.1	chr11	+	3632	21	novel_not_in_catalog	TTC17	novel	3648	20	NA	NA	-11	-15	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	140841.88808322436	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	369	3068	55.0	-23	True	ATTAAA	-4
PB.1904.3	chr11	+	3599	20	full-splice_match	TTC17	ENST00000299240.10	3648	20	13	36	4	-36	multi-exon	FALSE	canonical	1	185220	junction_19	90962.9877726752	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	11	2881	45.0	1	True	NA	NA
PB.1904.2	chr11	+	3814	21	novel_not_in_catalog	TTC17	novel	3648	20	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	140841.88808322436	NA	2	NA	TRUE	NA	NA	NA	C	coding	899	2700	363	3062	25.0	-17	True	TATAAA	-14
PB.9357.23	chr5	+	4776	18	novel_not_in_catalog	LNPEP	novel	2075	2	NA	NA	-3609	1128	any annotated donor/acceptor	FALSE	canonical	1	4479	junction_1	55552.30981260428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	110	3145	50.0	1	True	AATAAA	-21
PB.1255.1	chr1	-	4185	3	novel_not_in_catalog	LYPD8	novel	1233	3	NA	NA	14158	202	intron_retention	FALSE	canonical	1	3934	junction_2	440.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-26	False	NA	NA
PB.10408.12	chr7	+	1992	8	novel_in_catalog	TMEM106B	novel	2126	8	NA	NA	2	-186	combination_of_known_junctions	FALSE	canonical	1	22861	junction_1	174489.34164291984	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	240	1064	15.0	-16	False	AATAAA	-30
PB.7384.1	chr20	+	2577	13	full-splice_match	GNAS	ENST00000313949.11	2578	13	-5	6	-5	-4	multi-exon	FALSE	canonical	1	108476	junction_1	7329201.444149266	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	1132	2220	35.0	-9	True	AATAAA	-15
PB.7384.3	chr20	+	1482	12	novel_in_catalog	GNAS	novel	2578	13	NA	NA	9	-25	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	7836779.718931957	NA	2	NA	TRUE	NA	NA	NA	C	coding	321	966	192	1157	85.0	0	True	NA	NA
PB.7384.2	chr20	+	2519	12	novel_in_catalog	GNAS	novel	2578	13	NA	NA	-21	-25	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	7825564.1028981395	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	1148	2194	85.0	-25	True	NA	NA
PB.7384.5	chr20	+	1532	12	full-splice_match	GNAS	ENST00000480975.5	1534	12	9	-7	9	-4	multi-exon	FALSE	canonical	1	481370	junction_1	7398918.642161473	NA	2	NA	TRUE	NA	NA	NA	C	coding	320	963	213	1175	35.0	0	True	AATAAA	-15
PB.7384.7	chr20	+	1530	13	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	-17	-83	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	7639983.516166291	NA	8	NA	TRUE	NA	NA	NA	C	coding	380	1143	121	1263	75.0	-5	True	NA	NA
PB.7384.6	chr20	+	1575	13	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	-17	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7316032.819794343	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	79	1218	35.0	-5	True	AATAAA	-15
PB.7384.9	chr20	+	1616	13	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	-9	-83	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7639983.516166291	NA	1	1	TRUE	NA	NA	NA	C	coding	285	858	492	1349	75.0	3	True	NA	NA
PB.7384.8	chr20	+	1709	13	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	-12	-28	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	7639983.516166291	NA	4	NA	TRUE	NA	NA	NA	C	coding	380	1143	245	1387	75.0	0	True	NA	NA
PB.11092.9	chr8	+	2553	18	novel_not_in_catalog	DDHD2	novel	568	4	NA	NA	-39	1	any annotated donor/acceptor	FALSE	canonical	1	23	junction_8	110175.30347426803	NA	5	1	TRUE	NA	NA	NA	C	coding	691	2076	237	2312	5.0	24	True	TATAAA	-22
PB.8263.14	chr3	+	2069	4	full-splice_match	TBC1D23	ENST00000471273.1	2304	4	235	0	235	0	multi-exon	FALSE	canonical	1	296750	junction_1	30405.954329155113	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	111	503	40.0	NA	False	AATAAA	-15
PB.7007.1	chr2	-	8040	26	full-splice_match	USP37	ENST00000258399.7	8032	26	-8	0	-8	0	multi-exon	FALSE	canonical	1	59940	junction_25	20866.903941926794	NA	7	NA	TRUE	NA	NA	NA	C	coding	979	2940	422	3361	15.0	-33	True	ATTAAA	-17
PB.1160.3	chr1	-	3016	25	full-splice_match	TMEM63A	ENST00000366835.7	4098	25	-15	1097	-15	-57	multi-exon	FALSE	canonical	1	138676	junction_24	91884.89722926905	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	287	2710	30.0	6761	False	AATATA	-16
PB.6984.7	chr2	-	8549	9	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-129126	-419181	any annotated donor/acceptor	TRUE	canonical	1	9205	junction_8	35986.98231978301	NA	9	NA	TRUE	NA	NA	NA	B	coding	500	1503	225	1727	40.0	-1	True	AGTAAA	-30
PB.7007.2	chr2	-	7985	26	full-splice_match	USP37	ENST00000418019.5	3353	26	-68	-4564	2	0	multi-exon	TRUE	canonical	1	10947	junction_24	25242.99599353452	NA	2	NA	TRUE	NA	NA	NA	C	coding	979	2940	367	3306	15.0	-23	True	ATTAAA	-17
PB.7007.5	chr2	-	4997	26	full-splice_match	USP37	ENST00000258399.7	8032	26	8	3027	8	-10	multi-exon	FALSE	canonical	1	59940	junction_25	20866.903941926794	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	406	3345	85.0	-17	True	NA	NA
PB.11948.2	chrX	-	2363	10	full-splice_match	ARSD	ENST00000381154.5	5159	10	12	2784	0	-598	multi-exon	FALSE	canonical	1	72444	junction_9	24665.326764408812	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	203	1846	25.0	-1	True	NA	NA
PB.11948.1	chrX	-	4210	10	full-splice_match	ARSD	ENST00000381154.5	5159	10	-13	962	-13	-14	multi-exon	FALSE	canonical	1	72444	junction_9	24665.326764408812	NA	5	NA	TRUE	NA	NA	NA	C	coding	547	1644	228	1871	80.0	16	True	NA	NA
PB.3989.1	chr15	+	2234	2	full-splice_match	COMMD4	ENST00000566843.1	2284	2	48	2	6	0	multi-exon	FALSE	canonical	1	645481	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	91	276	22	297	15.0	6	True	AATAAA	-15
PB.8263.12	chr3	+	3853	19	novel_in_catalog	TBC1D23	novel	587	5	NA	NA	242	0	combination_of_known_junctions	FALSE	canonical	1	2830	junction_1	71821.19848566067	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	644	2287	40.0	-1	True	AATAAA	-15
PB.1160.1	chr1	-	4106	25	full-splice_match	TMEM63A	ENST00000366835.7	4098	25	-10	2	-10	-2	multi-exon	FALSE	canonical	1	138676	junction_24	91884.89722926905	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	282	2705	30.0	-11	True	AGTAAA	-15
PB.960.1	chr1	+	2211	6	novel_not_in_catalog	TOR3A	novel	2724	6	NA	NA	-32	-7	any annotated donor/acceptor	FALSE	canonical	1	1626	junction_1	234431.01485221618	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	781	1440	25.0	-32	True	ATTAAA	-13
PB.10309.6	chr6	-	3040	14	full-splice_match	EZR	ENST00000367075.3	3096	14	51	5	-12	-5	multi-exon	FALSE	canonical	1	1238500	junction_2	546726.8139811476	NA	26	2	TRUE	NA	NA	NA	C	coding	586	1761	119	1879	30.0	2	True	AATAAA	-11
PB.960.3	chr1	+	2579	5	novel_in_catalog	TOR3A	novel	2724	6	NA	NA	-3	-7	intron_retention	FALSE	canonical	1	269824	junction_1	165794.84599404017	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	1149	1808	25.0	-3	True	ATTAAA	-13
PB.10309.4	chr6	-	3198	15	novel_not_in_catalog	EZR	novel	3068	13	NA	NA	-19	0	any annotated donor/acceptor	TRUE	canonical	1	5657	junction_11	908607.5953301276	NA	3	NA	TRUE	NA	NA	NA	C	coding	429	1290	737	2026	10.0	-5	True	AATAAA	-22
PB.10309.2	chr6	-	3119	14	novel_not_in_catalog	EZR	novel	3068	13	NA	NA	-19	1	any annotated donor/acceptor	FALSE	canonical	1	8300	junction_1	783060.8716045156	NA	3	NA	TRUE	NA	NA	NA	C	coding	543	1632	126	1757	5.0	-5	True	AATAAA	-24
PB.8578.23	chr3	-	2850	16	full-splice_match	IGF2BP2	ENST00000382199.6	3688	16	20	818	-12	-582	multi-exon	FALSE	canonical	1	37161	junction_1	59829.25970556175	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	77	1876	65.0	4	True	NA	NA
PB.9738.21	chr6	-	4451	3	full-splice_match	NEDD9	ENST00000512665.5	761	3	-81	-3609	-5	1278	multi-exon	FALSE	canonical	1	2582	junction_1	31120.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	3409	3720	50.0	-48	True	AATAAA	-28
PB.4846.1	chr17	-	3144	11	full-splice_match	POLDIP2	ENST00000540200.5	2121	11	-14	-1009	-14	1009	multi-exon	FALSE	canonical	1	851706	junction_10	244690.96006328065	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	89	1195	10.0	9894	False	CATAAA	-18
PB.9738.22	chr6	-	2434	2	novel_not_in_catalog	NEDD9	novel	4934	10	NA	NA	4	-22770	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-39	True	AAGAAA	-25
PB.8578.20	chr3	-	2809	14	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	25	-449	no_combination_of_known_junctions	FALSE	canonical	1	1088	junction_11	72894.46061843156	NA	14	NA	TRUE	NA	NA	NA	C	coding	463	1392	311	1702	65.0	19	True	AAAACA	-28
PB.10309.9	chr6	-	3228	13	novel_in_catalog	EZR	novel	3068	13	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	1238500	junction_1	561842.7677422306	NA	4	NA	TRUE	NA	NA	NA	C	coding	572	1719	121	1839	25.0	0	True	AATAAA	-15
PB.8392.1	chr3	-	2470	8	full-splice_match	MBD4	ENST00000429544.6	2478	8	-2	10	-2	-2	multi-exon	FALSE	canonical	1	319863	junction_5	108036.49792509181	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	199	1923	40.0	-3	True	NA	NA
PB.1899.6	chr11	-	2202	7	full-splice_match	TRAF6	ENST00000526995.5	4627	7	-10	2435	-10	-289	multi-exon	FALSE	canonical	1	15200	junction_5	21104.13859425576	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	258	1826	25.0	-11	True	ACTAAA	-34
PB.152.2	chr1	-	3823	27	full-splice_match	USP48	ENST00000308271.13	4595	27	450	322	39	2	multi-exon	FALSE	canonical	1	336773	junction_16	106413.90336449345	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	200	3307	30.0	-8	True	AATAAA	-23
PB.1899.4	chr11	-	2749	7	full-splice_match	TRAF6	ENST00000526995.5	4627	7	-28	1906	-28	240	multi-exon	FALSE	canonical	1	15200	junction_5	21104.13859425576	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	276	1844	20.0	-29	True	ATTAAA	-17
PB.1899.5	chr11	-	2452	7	full-splice_match	TRAF6	ENST00000526995.5	4627	7	-6	2181	-6	-35	multi-exon	FALSE	canonical	1	15200	junction_5	21104.13859425576	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	254	1822	40.0	-7	True	AATATA	-19
PB.1899.2	chr11	-	3625	7	full-splice_match	TRAF6	ENST00000526995.5	4627	7	-11	1013	-11	-1013	multi-exon	FALSE	canonical	1	15200	junction_5	21104.13859425576	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	259	1827	30.0	-12	True	AATAAA	-28
PB.1899.3	chr11	-	3403	7	full-splice_match	TRAF6	ENST00000526995.5	4627	7	3	1221	3	925	multi-exon	FALSE	canonical	1	15200	junction_5	21104.13859425576	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	245	1813	10.0	2	True	AATAAA	-13
PB.1899.1	chr11	-	3934	7	full-splice_match	TRAF6	ENST00000526995.5	4627	7	-5	698	-5	-698	multi-exon	FALSE	canonical	1	15200	junction_5	21104.13859425576	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	253	1821	50.0	-6	True	NA	NA
PB.1160.4	chr1	-	4040	23	novel_in_catalog	TMEM63A	novel	4098	25	NA	NA	-5	-58	intron_retention	FALSE	canonical	1	138676	junction_22	92527.02697524706	NA	3	NA	TRUE	NA	NA	NA	C	coding	481	1446	2290	3735	30.0	-6	True	AATATA	-15
PB.5592.12	chr19	-	2823	12	full-splice_match	LMNB2	ENST00000325327.3	4671	12	43	1805	43	-500	multi-exon	FALSE	canonical	1	516361	junction_11	131828.9531299511	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	81	1883	15.0	5	True	NA	NA
PB.152.1	chr1	-	4179	27	full-splice_match	USP48	ENST00000308271.13	4595	27	400	16	-11	-16	multi-exon	FALSE	canonical	1	336773	junction_16	106413.90336449345	NA	1	NA	TRUE	NA	NA	NA	C	coding	1035	3108	250	3357	50.0	-1	True	AATAAA	-18
PB.8578.24	chr3	-	2707	15	full-splice_match	IGF2BP2	ENST00000346192.7	3291	15	2	582	2	-582	multi-exon	FALSE	canonical	1	21258	junction_6	62593.614864302355	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	63	1733	65.0	-16	True	NA	NA
PB.3536.5	chr14	+	6198	24	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	-24	2	no_combination_of_known_junctions	FALSE	canonical	1	37736	junction_1	101498.82290585493	NA	0	NA	TRUE	NA	NA	NA	B	coding	1782	5349	604	5952	15.0	-51	True	AATAAA	-19
PB.2600.3	chr12	-	2593	1	novel_in_catalog	BCDIN3D	novel	3253	2	NA	NA	1	-1940	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	121	366	42	407	80.0	0	True	NA	NA
PB.2600.2	chr12	-	1412	2	full-splice_match	BCDIN3D	ENST00000333924.5	3253	2	23	1818	-12	739	multi-exon	FALSE	canonical	1	76791	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	20	898	30.0	-1	True	NA	NA
PB.2600.1	chr12	-	1962	2	full-splice_match	BCDIN3D	ENST00000333924.5	3253	2	24	1267	-11	-1267	multi-exon	FALSE	canonical	1	76791	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	19	897	100.0	0	True	NA	NA
PB.5592.10	chr19	-	4439	13	novel_not_in_catalog	LMNB2	novel	769	5	NA	NA	16	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242307.16793065862	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	108	1910	10.0	-22	True	AATAAA	-12
PB.152.7	chr1	-	3384	26	novel_in_catalog	USP48	novel	4309	26	NA	NA	-9	-22	intron_retention	FALSE	canonical	1	14147	junction_15	140884.25800865618	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	279	3188	35.0	-30	False	AATAAA	-29
PB.4696.4	chr17	-	4417	21	novel_in_catalog	CAMTA2	novel	4431	21	NA	NA	-19	0	intron_retention	FALSE	canonical	1	44546	junction_16	101784.45180157675	NA	0	NA	TRUE	NA	NA	NA	B	coding	1171	3516	144	3659	10.0	-40	True	ATTAAA	-13
PB.4696.5	chr17	-	4309	21	novel_in_catalog	CAMTA2	novel	4431	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	12023	junction_16	105978.18395377418	NA	0	NA	TRUE	NA	NA	NA	B	coding	842	2529	1023	3551	10.0	-21	True	ATTAAA	-13
PB.4696.6	chr17	-	3916	21	novel_in_catalog	CAMTA2	novel	4431	21	NA	NA	-1	-82	combination_of_known_junctions	FALSE	canonical	1	44546	junction_16	101784.45180157675	NA	5	NA	TRUE	NA	NA	NA	B	coding	1171	3516	124	3639	5.0	-20	True	NA	NA
PB.1885.9	chr11	-	1637	10	full-splice_match	FBXO3	ENST00000448981.6	1672	10	27	8	0	-8	multi-exon	FALSE	canonical	1	152151	junction_9	67046.61275247428	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	20	1267	45.0	3	True	AATAAA	-25
PB.4696.1	chr17	-	4910	22	novel_in_catalog	CAMTA2	novel	4431	21	NA	NA	-79	-2	intron_retention	TRUE	canonical	1	9716	junction_21	95217.31296684364	NA	1	NA	TRUE	NA	NA	NA	B	coding	1218	3657	492	4148	5.0	-21	True	ATTAAA	-17
PB.4696.2	chr17	-	4507	22	novel_in_catalog	CAMTA2	novel	4431	21	NA	NA	-33	-2	intron_retention	FALSE	canonical	1	94629	junction_21	83855.38566823935	NA	0	NA	TRUE	NA	NA	NA	B	coding	1195	3588	158	3745	5.0	-54	True	ATTAAA	-17
PB.4696.3	chr17	-	4495	22	novel_in_catalog	CAMTA2	novel	4431	21	NA	NA	-10	0	intron_retention	FALSE	canonical	1	28980	junction_17	101268.85689587759	NA	0	NA	TRUE	NA	NA	NA	B	coding	1200	3603	135	3737	10.0	-31	True	ATTAAA	-13
PB.1885.5	chr11	-	2583	11	novel_in_catalog	FBXO3	novel	5798	10	NA	NA	-5	-64	combination_of_known_junctions	FALSE	canonical	1	31920	junction_1	100284.83530205351	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	34	1281	25.0	-11	True	NA	NA
PB.1885.4	chr11	-	3302	11	novel_in_catalog	FBXO3	novel	5798	10	NA	NA	0	665	combination_of_known_junctions	FALSE	canonical	1	31920	junction_1	100284.83530205351	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	24	1271	25.0	-1	True	AATAAA	-15
PB.1885.7	chr11	-	3597	10	full-splice_match	FBXO3	ENST00000448981.6	1672	10	17	-1942	-1	-116	multi-exon	FALSE	canonical	1	152151	junction_9	67046.61275247428	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	30	1277	35.0	-7	True	NA	NA
PB.1885.6	chr11	-	3649	10	full-splice_match	FBXO3	ENST00000448981.6	1672	10	17	-1994	-1	-64	multi-exon	FALSE	canonical	1	152151	junction_9	67046.61275247428	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	30	1277	25.0	-7	True	NA	NA
PB.1885.1	chr11	-	2401	11	full-splice_match	FBXO3	ENST00000265651.7	2397	11	-4	0	0	0	multi-exon	TRUE	canonical	1	152151	junction_10	70901.82563806097	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	24	1439	30.0	-1	True	TTTAAA	-17
PB.1885.3	chr11	-	4378	10	full-splice_match	FBXO3	ENST00000448981.6	1672	10	17	-2723	-1	665	multi-exon	FALSE	canonical	1	152151	junction_9	67046.61275247428	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	30	1277	25.0	-7	True	AATAAA	-15
PB.1885.2	chr11	-	4547	11	novel_in_catalog	FBXO3	novel	5798	10	NA	NA	-1	-1042	combination_of_known_junctions	FALSE	canonical	1	31920	junction_1	100284.83530205351	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	30	1277	45.0	-7	True	AATAAA	-12
PB.995.5	chr1	-	5150	15	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	27	-4	intron_retention	FALSE	canonical	1	218703	junction_8	374535.61357249116	NA	3	NA	TRUE	NA	NA	NA	C	coding	302	909	2599	3507	35.0	550	False	AATAAA	-24
PB.995.31	chr1	-	2862	8	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	-2	1760	intron_retention	FALSE	canonical	1	218703	junction_1	183197.59075224918	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	570	1235	15.0	577	False	ATTAAA	-21
PB.995.30	chr1	-	2658	15	full-splice_match	IVNS1ABP	ENST00000367498.7	4199	15	44	1497	-12	-114	multi-exon	FALSE	canonical	1	480060	junction_14	328786.5563384907	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	580	2508	15.0	567	False	ATTAAA	-11
PB.7908.5	chr3	+	2991	6	novel_in_catalog	ARL8B	novel	3005	7	NA	NA	30	-167	intron_retention	FALSE	canonical	1	263019	junction_1	80732.32044974306	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	141	605	25.0	34	True	AATAAA	-16
PB.1169.8	chr1	+	2671	12	incomplete-splice_match	PSEN2	ENST00000366783.7	2306	13	239	8	-61	-4	5prime_fragment	FALSE	canonical	1	122069	junction_3	31468.385026066404	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	822	2156	20.0	186	False	AATAAA	-16
PB.1169.9	chr1	+	3116	13	novel_not_in_catalog	PSEN2	novel	734	4	NA	NA	28	1	intron_retention	FALSE	canonical	1	699	junction_2	73025.14402112162	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	1150	2592	20.0	32	False	AATAAA	-25
PB.1169.6	chr1	+	2359	13	novel_in_catalog	PSEN2	novel	734	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	1515	junction_3	80003.94713595907	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	397	1842	15.0	1	True	AATAAA	-18
PB.4458.1	chr16	-	3353	20	full-splice_match	KIFC3	ENST00000445690.6	3379	20	27	-1	8	-1	multi-exon	FALSE	canonical	1	73756	junction_19	97963.02442098432	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	157	2637	35.0	-38	True	AATAAA	-18
PB.4458.2	chr16	-	3373	20	novel_in_catalog	KIFC3	novel	3225	20	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	1167	junction_19	108660.27712476638	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	178	2658	40.0	7022	False	AATAAA	-17
PB.4458.3	chr16	-	3356	20	full-splice_match	KIFC3	ENST00000541240.5	3047	20	-83	-226	-82	0	multi-exon	FALSE	canonical	1	2596	junction_19	108436.49355311238	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	95	2641	40.0	7237	False	AATAAA	-17
PB.4458.4	chr16	-	3695	22	novel_in_catalog	KIFC3	novel	3225	20	NA	NA	6	-1	no_combination_of_known_junctions	FALSE	canonical	1	19254	junction_18	136758.5078859879	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	159	2981	40.0	-40	True	AATAAA	-16
PB.1169.3	chr1	+	2573	14	novel_not_in_catalog	PSEN2	novel	734	4	NA	NA	10	-4	any annotated donor/acceptor	FALSE	canonical	1	699	junction_3	73122.58748982493	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	613	2058	20.0	-43	False	AATAAA	-16
PB.6397.1	chr2	+	2932	3	full-splice_match	LBH	ENST00000395323.8	3095	3	162	1	-5	-1	multi-exon	FALSE	canonical	1	559364	junction_1	50130.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	105	318	209	526	5.0	-3	True	AATAAA	-18
PB.938.2	chr1	-	3552	3	full-splice_match	TNFSF4	ENST00000281834.3	3470	3	-81	-1	-81	0	multi-exon	FALSE	canonical	1	51959	junction_2	5704.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	219	770	20.0	-65	False	AATAAA	-16
PB.2756.11	chr12	+	2096	8	novel_in_catalog	CCT2	novel	2041	16	NA	NA	0	-570	intron_retention	FALSE	canonical	1	2052011	junction_2	425178.43133154226	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	64	519	65.0	0	True	AATAGA	-9
PB.2756.10	chr12	+	2608	15	novel_in_catalog	CCT2	novel	2041	16	NA	NA	0	6	intron_retention	FALSE	canonical	1	2030286	junction_8	478530.7530840295	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	933	2357	15.0	0	True	AATAAA	-21
PB.6510.7	chr2	+	2240	4	incomplete-splice_match	CEP68	ENST00000377990.6	5847	7	46	12524	-34	-4	3prime_fragment	FALSE	canonical	1	64375	junction_1	38796.904678938845	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2082	158	2239	40.0	-28	True	AGTAAA	-6
PB.6510.6	chr2	+	3104	8	novel_not_in_catalog	CEP68	novel	550	2	NA	NA	-35	-2482	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	49170.42695833855	NA	1	NA	TRUE	NA	NA	NA	C	coding	685	2058	159	2216	75.0	-29	True	NA	NA
PB.6510.5	chr2	+	2751	7	novel_in_catalog	CEP68	novel	550	2	NA	NA	-36	-3048	intron_retention	FALSE	canonical	1	60281	junction_1	31220.43133199084	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	156	2429	15.0	-30	True	ATTAAA	-26
PB.6510.4	chr2	+	3322	7	full-splice_match	CEP68	ENST00000377990.6	5847	7	43	2482	-37	-2482	multi-exon	FALSE	canonical	1	64375	junction_1	30034.787412080826	NA	1	1	TRUE	NA	NA	NA	C	coding	757	2274	161	2434	75.0	-31	True	NA	NA
PB.6510.3	chr2	+	3019	4	incomplete-splice_match	CEP68	ENST00000377990.6	5847	7	42	11749	-38	4	3prime_fragment	FALSE	canonical	1	64375	junction_1	38796.904678938845	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	162	2300	90.0	-32	True	NA	NA
PB.6510.2	chr2	+	5793	7	novel_in_catalog	CEP68	novel	550	2	NA	NA	-38	-8	intron_retention	FALSE	canonical	1	60281	junction_1	31220.43133199084	NA	5	NA	TRUE	NA	NA	NA	C	coding	757	2274	158	2431	30.0	-32	True	AATAAA	-8
PB.6510.1	chr2	+	4501	7	full-splice_match	CEP68	ENST00000377990.6	5847	7	-14	1360	-8	-1360	multi-exon	FALSE	canonical	1	64375	junction_1	30034.787412080826	NA	2	NA	TRUE	NA	NA	NA	C	coding	757	2274	218	2491	75.0	-88	False	NA	NA
PB.169.1	chr1	-	2279	8	novel_not_in_catalog	FUCA1	novel	2047	8	NA	NA	-65	-7	any annotated donor/acceptor	FALSE	canonical	1	8519	junction_7	163287.59446786533	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	623	1648	50.0	-70	True	AATAAA	-29
PB.1461.3	chr10	-	2978	9	novel_in_catalog	DNAJB12	novel	3198	9	NA	NA	158	-7	combination_of_known_junctions	FALSE	canonical	1	111511	junction_1	135295.47321736	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	95	1228	5.0	-1	True	AATATA	-12
PB.1461.2	chr10	-	4174	8	full-splice_match	DNAJB12	ENST00000338820.7	4360	8	180	6	180	-5	multi-exon	FALSE	canonical	1	201149	junction_6	113153.32111136029	NA	3	NA	TRUE	NA	NA	NA	C	coding	375	1128	73	1200	5.0	21	True	AATATA	-14
PB.1461.1	chr10	-	2954	9	full-splice_match	DNAJB12	ENST00000394903.6	3198	9	166	78	166	-77	multi-exon	FALSE	canonical	1	139381	junction_1	129754.92582165956	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	87	1214	20.0	7	True	NA	NA
PB.1461.4	chr10	-	2482	8	full-splice_match	DNAJB12	ENST00000338820.7	4360	8	158	1720	158	-27	multi-exon	FALSE	canonical	1	201149	junction_6	113153.32111136029	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	95	1222	75.0	-1	True	NA	NA
PB.11811.2	chr9	-	1693	3	full-splice_match	DPM2	ENST00000495270.1	1662	3	-29	-2	-12	2	multi-exon	FALSE	canonical	1	315996	junction_2	204061.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-3	True	AATAAA	-18
PB.3749.4	chr15	-	4053	18	full-splice_match	FMN1	ENST00000559047.5	4260	18	800	-593	800	434	multi-exon	FALSE	canonical	1	12040	junction_17	11449.388651725903	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	137	3460	70.0	744	False	ACTAAA	-35
PB.3749.5	chr15	-	3997	16	incomplete-splice_match	FMN1	ENST00000559047.5	4260	18	125	24502	125	12083	3prime_fragment	FALSE	canonical	1	12040	junction_15	11904.415925006802	NA	0	NA	TRUE	NA	NA	NA	C	coding	1263	3789	209	3997	55.0	1	True	AGTAAA	-10
PB.3749.6	chr15	-	4339	15	novel_in_catalog	FMN1	novel	13529	21	NA	NA	89	283	combination_of_known_junctions	FALSE	canonical	1	7461	junction_1	14743.853559385763	NA	5	NA	TRUE	NA	NA	NA	C	coding	1253	3762	245	4006	30.0	1	True	AATAAA	-25
PB.3749.7	chr15	-	3937	15	novel_in_catalog	FMN1	novel	13529	21	NA	NA	213	5	combination_of_known_junctions	FALSE	canonical	1	7461	junction_1	14743.853559385763	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	121	3882	15.0	-1	True	AATAAA	-19
PB.10288.3	chr6	-	2650	4	novel_in_catalog	FBXO5	novel	2610	2	NA	NA	-35	-13	intron_retention	FALSE	canonical	1	103358	junction_3	119320.52616656812	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	95	1021	50.0	-15	True	AATAAA	-9
PB.3749.1	chr15	-	7187	18	full-splice_match	FMN1	ENST00000559047.5	4260	18	123	-3050	123	2891	multi-exon	FALSE	canonical	1	12040	junction_17	11449.388651725903	NA	2	NA	TRUE	NA	NA	NA	C	coding	1308	3927	211	4137	65.0	-1	True	NA	NA
PB.3749.2	chr15	-	4812	18	full-splice_match	FMN1	ENST00000559047.5	4260	18	1316	-1868	1316	1709	multi-exon	FALSE	canonical	1	12040	junction_17	11449.388651725903	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	953	2944	20.0	1260	False	ATTAAA	-17
PB.3749.3	chr15	-	6043	18	full-splice_match	FMN1	ENST00000559047.5	4260	18	85	-1868	85	1709	multi-exon	FALSE	canonical	1	12040	junction_17	11449.388651725903	NA	0	NA	TRUE	NA	NA	NA	C	coding	1308	3927	249	4175	20.0	-3	True	ATTAAA	-17
PB.7734.4	chr22	+	2300	15	full-splice_match	TOM1	ENST00000449058.6	2389	15	87	2	1	0	multi-exon	FALSE	canonical	1	323746	junction_14	65131.89031437264	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	39	1517	30.0	-3	True	ATTAAA	-32
PB.3749.8	chr15	-	4485	9	incomplete-splice_match	FMN1	ENST00000559047.5	4260	18	211	132861	211	988	3prime_fragment	FALSE	canonical	1	12040	junction_8	14399.727818065694	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	123	3170	25.0	-3	True	NA	NA
PB.3749.9	chr15	-	2997	6	incomplete-splice_match	FMN1	ENST00000559047.5	4260	18	85	189853	85	-56004	3prime_fragment	FALSE	canonical	1	12040	junction_5	17931.364907334853	NA	1	NA	TRUE	NA	NA	NA	C	coding	916	2748	249	2996	55.0	-3	True	NA	NA
PB.7734.2	chr22	+	2427	16	novel_in_catalog	TOM1	novel	553	5	NA	NA	5	-1	intron_retention	FALSE	canonical	1	4155	junction_2	169079.22589200604	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	376	1656	25.0	-33	True	ATTAAA	-20
PB.7734.3	chr22	+	2285	15	novel_in_catalog	TOM1	novel	553	5	NA	NA	-2	3	intron_retention	FALSE	canonical	1	13443	junction_3	120460.07241475645	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	48	1508	20.0	-12	True	ATTAAA	-26
PB.9911.15	chr6	+	4205	11	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-22	22	intron_retention	FALSE	canonical	1	868676	junction_1	475156.10493289464	NA	14	NA	TRUE	NA	NA	NA	C	coding	399	1200	2416	3615	30.0	-3	True	AATAAA	-14
PB.9911.14	chr6	+	2195	7	incomplete-splice_match	BRD2	ENST00000482914.5	4834	14	1179	4433	-85	-2	internal_fragment	FALSE	canonical	1	362360	junction_3	668780.8959506719	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	1226	2110	25.0	-7956	False	TATAAA	-16
PB.9911.11	chr6	+	4564	13	full-splice_match	BRD2	ENST00000374831.8	4807	13	46	197	4	22	multi-exon	FALSE	canonical	1	239763	junction_1	607433.6174228503	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	1569	3974	30.0	-3	True	AATAAA	-14
PB.9911.10	chr6	+	3101	10	incomplete-splice_match	BRD2	ENST00000374831.8	4807	13	154	3317	89	-9	3prime_fragment	FALSE	canonical	1	239763	junction_1	616788.7400879926	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1641	1461	3101	75.0	-9046	False	NA	NA
PB.10189.1	chr6	-	5619	5	novel_in_catalog	MCM9	novel	5101	13	NA	NA	-753	-8	intron_retention	FALSE	canonical	1	12132	junction_4	17632.716628117745	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	2567	4252	40.0	5	True	AATAAA	-19
PB.11204.2	chr8	+	4962	6	full-splice_match	ZBTB10	ENST00000455036.7	5458	6	760	-264	666	264	multi-exon	FALSE	canonical	1	140714	junction_3	19177.097261055962	NA	2	NA	TRUE	NA	NA	NA	C	coding	698	2097	358	2454	45.0	518	False	AGTAAA	-12
PB.11204.3	chr8	+	3937	6	full-splice_match	ZBTB10	ENST00000455036.7	5458	6	1252	269	1158	-269	multi-exon	FALSE	canonical	1	140714	junction_3	19177.097261055962	NA	1	NA	TRUE	NA	NA	NA	C	coding	629	1890	73	1962	40.0	1010	False	AATAAA	-17
PB.4670.1	chr17	+	657	2	full-splice_match	EMC6	ENST00000248378.5	653	2	-5	1	-5	-1	multi-exon	FALSE	canonical	1	600570	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	110	333	140	472	10.0	-2	True	ATTAAA	-14
PB.9911.19	chr6	+	3134	8	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-21	-2	intron_retention	FALSE	canonical	1	362360	junction_3	717398.7030145647	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	1162	2046	75.0	-2	True	NA	NA
PB.9911.18	chr6	+	3036	7	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-22	-9	intron_retention	FALSE	canonical	1	868676	junction_1	467054.0759611425	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	705	1955	75.0	-3	True	NA	NA
PB.6381.10	chr2	+	2598	7	novel_not_in_catalog	ZNF512	novel	3543	13	NA	NA	-13865	-4	any annotated donor/acceptor	FALSE	canonical	1	5759	junction_6	110363.35688332227	NA	51	1	TRUE	NA	NA	NA	C	coding	186	561	39	599	25.0	NA	False	AATAAA	-10
PB.8747.11	chr4	+	2108	4	full-splice_match	UBE2K	ENST00000510719.1	566	4	-184	-1358	5	-1	multi-exon	FALSE	canonical	1	10161	junction_1	576012.1880726329	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-13
PB.892.3	chr1	-	1593	2	full-splice_match	RGS5	ENST00000528818.1	574	2	-47	-972	-1	972	multi-exon	FALSE	canonical	1	59643	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-54	True	NA	NA
PB.8747.10	chr4	+	4996	5	full-splice_match	UBE2K	ENST00000503368.5	891	5	-27	-4078	-3	-4	multi-exon	FALSE	canonical	1	21140	junction_1	511222.4875993328	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	193	642	35.0	-9	True	AATAAA	-21
PB.7908.2	chr3	+	2274	7	full-splice_match	ARL8B	ENST00000611208.4	2981	7	47	660	0	447	multi-exon	FALSE	canonical	1	263019	junction_1	75102.48029563042	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	175	735	15.0	0	True	AATATA	-23
PB.892.2	chr1	-	2752	2	full-splice_match	RGS5	ENST00000528818.1	574	2	-43	-2135	3	2135	multi-exon	FALSE	canonical	1	59643	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-50	True	AATAAA	-20
PB.4483.4	chr16	+	1955	13	novel_in_catalog	AC074143.1	novel	1287	5	NA	NA	568	4127	intron_retention	FALSE	canonical	1	25711	junction_7	88123.69502201625	NA	0	NA	TRUE	NA	NA	NA	B	coding	270	813	986	1798	0.0	-9836	False	CATAAA	-16
PB.4483.5	chr16	+	1846	12	novel_in_catalog	AC074143.1	novel	1287	5	NA	NA	606	4127	intron_retention	FALSE	canonical	1	72763	junction_1	79388.49525233333	NA	0	NA	TRUE	NA	NA	NA	B	coding	244	735	955	1689	0.0	2	True	CATAAA	-16
PB.4483.6	chr16	+	2445	9	novel_in_catalog	AC074143.1	novel	1287	5	NA	NA	611	4126	intron_retention	FALSE	canonical	1	16235	junction_8	98062.41521060707	NA	0	NA	TRUE	NA	NA	NA	B	coding	198	597	1625	2221	0.0	7	True	CATAAA	-15
PB.4483.7	chr16	+	2457	9	novel_in_catalog	AC074143.1	novel	1287	5	NA	NA	620	4130	intron_retention	FALSE	canonical	1	72763	junction_1	86618.1599196114	NA	1	NA	TRUE	NA	NA	NA	B	coding	144	435	1485	1919	0.0	16	True	CATAAA	-19
PB.4483.1	chr16	+	2584	2	full-splice_match	FBXL8	ENST00000518148.1	1054	2	-18	-1512	-17	1	multi-exon	FALSE	canonical	1	80764	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	1162	2229	20.0	-4874	False	AATAAA	-16
PB.4483.2	chr16	+	4353	16	novel_in_catalog	FBXL8	novel	1658	3	NA	NA	0	5371	intron_retention	FALSE	canonical	1	3381	junction_15	90035.24469021377	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	160	1284	0.0	-10	True	CATAAA	-15
PB.4483.3	chr16	+	2012	12	novel_in_catalog	AC074143.1	novel	1287	5	NA	NA	546	4129	intron_retention	FALSE	canonical	1	52803	junction_7	82402.5428682697	NA	1	NA	TRUE	NA	NA	NA	B	coding	281	846	1008	1853	0.0	-9858	False	CATAAA	-18
PB.3540.3	chr14	+	3063	14	novel_not_in_catalog	PSEN1	novel	571	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	114	junction_1	172684.68838476785	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	549	1952	10.0	-56	True	ATTAAA	-24
PB.3540.2	chr14	+	6003	12	full-splice_match	PSEN1	ENST00000357710.8	2776	12	62	-3289	-9	-1	multi-exon	FALSE	canonical	1	184601	junction_1	92932.8489142688	NA	60	2	TRUE	NA	NA	NA	C	coding	463	1392	211	1602	15.0	2	True	AATAAA	-15
PB.3540.1	chr14	+	2460	12	full-splice_match	PSEN1	ENST00000357710.8	2776	12	-23	339	6	-339	multi-exon	FALSE	canonical	1	184601	junction_1	92932.8489142688	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	296	1687	30.0	-83	False	AGTAAA	-13
PB.4483.8	chr16	+	2082	11	novel_in_catalog	AC074143.1	novel	1287	5	NA	NA	620	4125	intron_retention	FALSE	canonical	1	72763	junction_1	82332.08750639085	NA	1	NA	TRUE	NA	NA	NA	B	coding	176	531	1397	1927	0.0	16	True	CATAAA	-14
PB.3540.6	chr14	+	6165	13	novel_in_catalog	PSEN1	novel	571	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	3562	junction_3	157513.9777778115	NA	2	NA	TRUE	NA	NA	NA	C	coding	384	1155	610	1764	15.0	-30	True	AATAAA	-15
PB.3540.5	chr14	+	6049	12	full-splice_match	PSEN1	ENST00000324501.9	6078	12	28	1	-2	-1	multi-exon	FALSE	canonical	1	177749	junction_3	99655.46382353704	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	245	1648	15.0	-32	True	AATAAA	-15
PB.3540.4	chr14	+	2737	12	full-splice_match	PSEN1	ENST00000324501.9	6078	12	53	3288	4	2	multi-exon	FALSE	canonical	1	177749	junction_3	99655.46382353704	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	220	1623	5.0	-7	True	ATTAAA	-27
PB.4646.3	chr17	-	3022	3	novel_not_in_catalog	CRK	novel	3675	3	NA	NA	12	-106	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	137630.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	100	303	2	304	45.0	-15	True	NA	NA
PB.4646.2	chr17	-	3667	3	full-splice_match	CRK	ENST00000398970.5	3675	3	-28	36	7	-36	multi-exon	FALSE	canonical	1	247537	junction_2	37551.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	135	749	20.0	-20	True	AATAAA	-10
PB.4646.1	chr17	-	3863	3	full-splice_match	CRK	ENST00000300574.2	3880	3	6	11	6	-11	multi-exon	FALSE	canonical	1	247537	junction_2	13862.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	136	1050	50.0	-21	True	AATAAA	-35
PB.4646.6	chr17	-	2200	3	full-splice_match	CRK	ENST00000398970.5	3675	3	-18	1493	17	44	multi-exon	FALSE	canonical	1	247537	junction_2	37551.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	125	739	90.0	-10	True	NA	NA
PB.4646.5	chr17	-	2374	3	full-splice_match	CRK	ENST00000300574.2	3880	3	14	1492	14	45	multi-exon	FALSE	canonical	1	247537	junction_2	13862.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	128	1042	90.0	-13	True	NA	NA
PB.4646.4	chr17	-	3553	3	full-splice_match	CRK	ENST00000398970.5	3675	3	-15	137	-15	-137	multi-exon	FALSE	canonical	1	247537	junction_2	37551.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	122	736	35.0	-7	True	AATAAA	-26
PB.7132.1	chr20	-	2782	9	full-splice_match	NSFL1C	ENST00000216879.8	3568	9	779	7	5	-7	multi-exon	FALSE	canonical	1	324569	junction_1	253972.57832413595	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	90	1202	20.0	-4	True	ATTAAA	-15
PB.7132.2	chr20	-	1347	9	full-splice_match	NSFL1C	ENST00000216879.8	3568	9	844	1377	1	196	multi-exon	FALSE	canonical	1	324569	junction_1	253972.57832413595	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	25	1137	85.0	-5	True	NA	NA
PB.7132.3	chr20	-	4410	8	novel_in_catalog	NSFL1C	novel	3799	7	NA	NA	5	196	intron_retention	FALSE	canonical	1	324569	junction_1	252771.9695430921	NA	18	NA	TRUE	NA	NA	NA	C	coding	286	861	3340	4200	85.0	-1	True	NA	NA
PB.948.3	chr1	+	3171	12	novel_not_in_catalog	RABGAP1L	novel	2605	14	NA	NA	13	-71987	any annotated donor/acceptor	FALSE	canonical	1	7295	junction_11	91357.07183400005	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	162	1625	35.0	10	True	NA	NA
PB.948.2	chr1	+	2952	14	novel_in_catalog	RABGAP1L	novel	2605	14	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	1965	junction_13	71126.30525244444	NA	2	NA	TRUE	NA	NA	NA	C	coding	605	1818	177	1994	15.0	-5	True	AATAAA	-23
PB.8722.1	chr4	+	2633	29	novel_in_catalog	ANAPC4	novel	2685	29	NA	NA	15	-2	combination_of_known_junctions	TRUE	canonical	1	7747	junction_3	95922.49432553687	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	439	2520	15.0	-44	True	AATAAA	-18
PB.6699.3	chr2	-	3140	8	novel_in_catalog	CKAP2L	novel	4533	9	NA	NA	2	-4	intron_retention	FALSE	canonical	1	10348	junction_7	51499.41784810657	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	446	2188	10.0	-7	True	ATTAAA	-13
PB.948.5	chr1	+	1984	12	novel_not_in_catalog	RABGAP1L	novel	2605	14	NA	NA	16	73168	any annotated donor/acceptor	FALSE	canonical	1	4745	junction_11	76320.05580372893	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	159	1628	25.0	13	True	NA	NA
PB.948.4	chr1	+	3132	7	full-splice_match	RABGAP1L	ENST00000635248.1	3074	7	-49	-9	15	9	multi-exon	FALSE	canonical	1	5210	junction_5	89825.74468565977	NA	5	NA	TRUE	NA	NA	NA	C	coding	245	738	160	897	25.0	12	True	AATAAA	-31
PB.9742.1	chr6	+	8958	9	novel_in_catalog	AL157373.2	novel	784	3	NA	NA	845	156142	no_combination_of_known_junctions	FALSE	canonical	1	23971	junction_1	39611.42136883471	NA	0	NA	TRUE	NA	NA	NA	A	coding	2718	8157	265	8421	15.0	-3600	False	AGTAAA	-19
PB.3977.10	chr15	-	1946	8	full-splice_match	EDC3	ENST00000568176.5	1825	8	-29	-92	0	59	multi-exon	FALSE	canonical	1	53266	junction_7	110926.73999003273	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	258	1784	20.0	-14	True	NA	NA
PB.6699.2	chr2	-	3223	9	full-splice_match	CKAP2L	ENST00000302450.10	4533	9	50	1260	-9	0	multi-exon	FALSE	canonical	1	107813	junction_2	24534.38543147148	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	30	2267	20.0	-19	True	ATTAAA	-17
PB.7406.9	chr20	-	2898	12	novel_in_catalog	DIDO1	novel	8574	16	NA	NA	-20	-6946	combination_of_known_junctions	FALSE	canonical	1	126511	junction_11	153711.44345953304	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2607	292	2898	60.0	-19	True	NA	NA
PB.8498.20	chr3	-	2058	17	incomplete-splice_match	IFT80	ENST00000487943.5	3893	20	17533	421	1980	-187	5prime_fragment	FALSE	canonical	1	10793	junction_14	48012.60665960556	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1302	757	2058	50.0	-1	True	AATAGA	-20
PB.1849.11	chr11	-	2103	12	full-splice_match	UEVLD	ENST00000396197.7	4156	12	-34	2087	0	2	multi-exon	FALSE	canonical	1	93591	junction_8	14730.149795291816	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	64	1479	25.0	-1	True	ATTAAA	-20
PB.1849.10	chr11	-	2770	11	full-splice_match	UEVLD	ENST00000543987.5	2503	11	27	-294	-2	294	multi-exon	FALSE	canonical	1	28439	junction_1	32621.43618297637	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	66	1205	60.0	-3	True	NA	NA
PB.8984.2	chr4	-	2712	21	full-splice_match	SCLT1	ENST00000281142.9	3055	21	87	256	25	97	multi-exon	FALSE	canonical	1	76797	junction_16	37797.29512448609	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	418	2484	30.0	-14	True	AATAAA	-10
PB.6524.26	chr2	-	2332	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	-9	6309	-3	-6309	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	187	2232	30.0	-8	True	TTTAAA	-35
PB.8984.3	chr4	-	1777	16	incomplete-splice_match	SCLT1	ENST00000281142.9	3055	21	138	62042	-57	-61645	3prime_fragment	FALSE	canonical	1	76797	junction_11	37442.64436328657	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1410	367	1776	65.0	37	True	NA	NA
PB.1045.11	chr1	+	2204	8	full-splice_match	TMEM183A	ENST00000367242.3	3019	8	10	805	-7	-805	multi-exon	FALSE	canonical	1	241	junction_7	51698.47371725666	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	122	1201	35.0	22	True	AATAAA	-20
PB.1045.10	chr1	+	2270	7	novel_in_catalog	TMEM183A	novel	3019	8	NA	NA	-7	-938	intron_retention	FALSE	canonical	1	241	junction_6	43035.859927119694	NA	6	1	TRUE	NA	NA	NA	C	coding	277	834	567	1400	70.0	22	True	AAAAAG	-24
PB.1805.5	chr11	-	1536	5	full-splice_match	TMEM9B	ENST00000534025.5	2083	5	336	211	4	-4	multi-exon	FALSE	canonical	1	226750	junction_4	191632.38600899378	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	125	721	25.0	4	True	AATAAA	-19
PB.1805.4	chr11	-	1671	4	full-splice_match	TMEM9B	ENST00000309134.9	1659	4	-12	0	-12	0	multi-exon	FALSE	canonical	1	33520	junction_3	280878.4035774595	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	271	645	25.0	-12	True	AATAAA	-19
PB.6604.9	chr2	+	3670	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	46	3018	2	2258	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	2	NA	TRUE	NA	NA	NA	C	coding	689	2070	21	2090	25.0	-7	True	NA	NA
PB.8984.1	chr4	-	2953	21	full-splice_match	SCLT1	ENST00000281142.9	3055	21	98	4	36	0	multi-exon	FALSE	canonical	1	76797	junction_16	37797.29512448609	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	407	2473	35.0	-3	True	AATAAA	-14
PB.1805.1	chr11	-	1600	5	full-splice_match	TMEM9B	ENST00000525069.5	1433	5	41	-208	41	1	multi-exon	FALSE	canonical	1	30550	junction_4	254332.07970584443	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	199	573	25.0	-37	True	AATAAA	-20
PB.995.3	chr1	-	2912	16	novel_not_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	-22	-4	any annotated donor/acceptor	FALSE	canonical	1	1935	junction_1	393667.937203064	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	590	2518	35.0	557	False	AATAAA	-24
PB.1805.3	chr11	-	1746	5	full-splice_match	TMEM9B	ENST00000534025.5	2083	5	337	0	5	0	multi-exon	FALSE	canonical	1	226750	junction_4	191632.38600899378	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	124	720	25.0	5	True	AATAAA	-19
PB.1805.2	chr11	-	3211	5	novel_not_in_catalog	TMEM9B	novel	1659	4	NA	NA	11	0	intron_retention	FALSE	canonical	1	365	junction_4	265081.0267959355	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	1691	2185	25.0	764	False	AATAAA	-19
PB.6604.3	chr2	+	2799	21	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	0	-3	intron_retention	FALSE	canonical	1	4480	junction_20	178340.83594798893	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	26	1189	30.0	-12	True	AATAAA	-26
PB.8984.6	chr4	-	3232	6	full-splice_match	SCLT1	ENST00000506368.5	2096	6	-162	-974	6	974	multi-exon	FALSE	canonical	1	16998	junction_1	77299.27213525365	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	437	832	15.0	923	False	AGTAAA	-15
PB.6604.1	chr2	+	4763	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	41	1930	0	-1930	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	2	NA	TRUE	NA	NA	NA	C	coding	689	2070	26	2095	95.0	-12	True	AGTAAA	-30
PB.9000.4	chr4	+	5012	7	novel_in_catalog	ZNF330	novel	733	2	NA	NA	0	-215	intron_retention	FALSE	canonical	1	367100	junction_4	88168.92804472307	NA	0	NA	TRUE	NA	NA	NA	B	coding	276	831	3689	4519	30.0	-19	True	ATTAAA	-17
PB.6604.7	chr2	+	2807	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	44	3883	0	1393	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	23	2092	25.0	-9	True	NA	NA
PB.6604.6	chr2	+	3209	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	44	3481	0	1795	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	23	2092	75.0	-9	True	NA	NA
PB.6604.5	chr2	+	3901	24	full-splice_match	PTCD3	ENST00000254630.11	6734	24	44	2789	0	2487	multi-exon	FALSE	canonical	1	92112	junction_3	147671.78247098796	NA	2	NA	TRUE	NA	NA	NA	C	coding	689	2070	23	2092	20.0	-9	True	NA	NA
PB.8984.7	chr4	-	2329	6	full-splice_match	SCLT1	ENST00000506368.5	2096	6	-231	-2	-1	2	multi-exon	FALSE	canonical	1	16998	junction_1	77299.27213525365	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	506	901	15.0	-12	True	AATAAA	-20
PB.2822.1	chr12	+	3369	16	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	-9	-28	combination_of_known_junctions	FALSE	canonical	1	10923	junction_2	97637.79047129015	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	96	2099	70.0	-5308	False	CATAAA	-20
PB.2822.3	chr12	+	3229	15	full-splice_match	NEDD1	ENST00000429527.6	3366	15	-4	141	-3	-11	multi-exon	FALSE	canonical	1	16117	junction_1	93485.36442422746	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	90	2072	90.0	-37	True	NA	NA
PB.2822.2	chr12	+	3603	15	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	-3	-198	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	96185.33132461263	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	95	2077	50.0	-37	True	AATAAA	-19
PB.2822.5	chr12	+	4333	15	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-18	intron_retention	FALSE	canonical	1	85484	junction_2	88968.1081515524	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	325	1833	85.0	-19	True	NA	NA
PB.2822.4	chr12	+	3182	16	full-splice_match	NEDD1	ENST00000266742.8	4046	16	0	864	0	-308	multi-exon	FALSE	canonical	1	85484	junction_2	88245.9272565029	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	340	2322	15.0	-34	True	NA	NA
PB.2822.7	chr12	+	3803	15	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-94	intron_retention	FALSE	canonical	1	9000	junction_5	120892.9906123762	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	668	2173	70.0	-19	True	AATAAA	-12
PB.2822.6	chr12	+	3840	16	full-splice_match	NEDD1	ENST00000266742.8	4046	16	22	184	7	-184	multi-exon	FALSE	canonical	1	85484	junction_2	88245.9272565029	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	318	2300	45.0	-12	True	AATAAA	-33
PB.2822.9	chr12	+	3383	16	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-19	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	99662.37361255696	NA	4	1	TRUE	NA	NA	NA	C	coding	660	1983	252	2234	85.0	-19	True	NA	NA
PB.2822.8	chr12	+	3562	17	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-18	intron_retention	FALSE	canonical	1	9000	junction_7	110655.71313423493	NA	1	1	TRUE	NA	NA	NA	C	coding	501	1506	907	2412	85.0	-19	True	NA	NA
PB.70.2	chr1	-	2791	5	novel_not_in_catalog	GPR157	novel	5265	4	NA	NA	68	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	20233.674320300797	NA	0	NA	TRUE	NA	NA	NA	B	coding	335	1008	76	1083	20.0	-1	True	AATAAA	-14
PB.2380.5	chr11	+	2006	11	full-splice_match	ACAD8	ENST00000281182.8	2249	11	49	194	-4	-189	multi-exon	FALSE	canonical	1	127494	junction_1	68000.19425119314	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	58	1305	0.0	-24	True	GATAAA	-15
PB.9524.2	chr5	+	4720	1	full-splice_match	PCDHGB4	ENST00000615384.1	4725	1	4	1	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	803	2412	184	2595	5.0	-4931	False	AATAAA	-14
PB.9524.1	chr5	+	3001	1	full-splice_match	PCDHGB4	ENST00000615384.1	4725	1	-5	1729	-5	-1729	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	803	2412	193	2604	35.0	-4940	False	AATAAA	-17
PB.6317.9	chr2	+	3092	5	incomplete-splice_match	GREB1	ENST00000396123.2	5296	16	21971	2	21887	0	5prime_fragment	FALSE	canonical	1	102362	junction_4	17748.75040671878	NA	3	NA	TRUE	NA	NA	NA	C	coding	185	558	203	760	15.0	7125	False	AATAAA	-15
PB.7249.11	chr20	+	4536	26	novel_not_in_catalog	ITCH	novel	6401	25	NA	NA	-8	1304	any annotated donor/acceptor	FALSE	canonical	1	2149	junction_2	117255.03562951997	NA	3	NA	TRUE	NA	NA	NA	C	coding	862	2589	323	2911	65.0	31	True	NA	NA
PB.7249.10	chr20	+	3959	25	full-splice_match	ITCH	ENST00000374864.8	6401	25	56	2386	-4	892	multi-exon	FALSE	canonical	1	240673	junction_10	67420.56480869367	NA	3	1	TRUE	NA	NA	NA	C	coding	862	2589	158	2746	25.0	18	True	ATTAAA	-14
PB.238.13	chr1	-	2158	7	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	22858	junction_5	1562449.0876093016	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	221	799	5.0	-4	True	AATAAA	-16
PB.7249.12	chr20	+	2212	20	incomplete-splice_match	ITCH	ENST00000374864.8	6401	25	69	30212	-8	-1	3prime_fragment	FALSE	canonical	1	240673	junction_10	63106.306457641476	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	145	2211	65.0	31	True	NA	NA
PB.238.15	chr1	-	2083	7	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-17	0	no_combination_of_known_junctions	FALSE	canonical	1	55642	junction_6	1548445.404428736	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	149	724	5.0	-1	True	AATAAA	-16
PB.238.14	chr1	-	2153	8	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	-1245	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1620817.1914279563	NA	1	1	TRUE	NA	NA	NA	C	coding	232	699	96	794	5.0	9267	False	AATAAA	-16
PB.238.17	chr1	-	2067	9	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	-26	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1557397.0347930258	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	102	890	5.0	2	True	AATAAA	-16
PB.238.16	chr1	-	2059	6	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-7	0	no_combination_of_known_junctions	FALSE	canonical	1	54532	junction_5	1676788.3696429434	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	83	700	5.0	1	True	AATAAA	-16
PB.9529.3	chr5	-	3076	19	novel_in_catalog	FCHSD1	novel	4320	20	NA	NA	0	-1	intron_retention	FALSE	canonical	1	10312	junction_6	51403.17139724401	NA	0	NA	TRUE	NA	NA	NA	B	coding	255	768	52	819	15.0	-24	True	NA	NA
PB.8984.8	chr4	-	1789	5	full-splice_match	SCLT1	ENST00000511426.5	1696	5	-95	2	-33	-2	multi-exon	FALSE	canonical	1	27431	junction_1	80555.4947920221	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	822	False	AATAAA	-23
PB.1005.10	chr1	+	3404	3	incomplete-splice_match	RGS1	ENST00000498352.1	2653	4	0	0	0	0	intron_retention	FALSE	canonical	1	840369	junction_1	28728.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	19	315	20.0	0	True	AATAAA	-31
PB.8984.9	chr4	-	1739	6	novel_not_in_catalog	SCLT1	novel	3055	21	NA	NA	17	-3	any annotated donor/acceptor	FALSE	canonical	1	7176	junction_3	101908.84772069597	NA	1	NA	TRUE	NA	NA	NA	C	coding	16	51	293	343	40.0	-22	True	AATAAA	-22
PB.5508.16	chr18	-	5565	2	incomplete-splice_match	BCL2	ENST00000333681.4	3209	3	174	186792	174	-25	3prime_fragment	FALSE	canonical	1	122770	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	726	1343	75.0	572	False	CATAAA	-3
PB.7704.2	chr22	+	1887	9	full-splice_match	TCN2	ENST00000407817.3	1870	9	-17	0	-17	0	multi-exon	TRUE	canonical	1	5862	junction_3	66954.32452881124	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	146	1348	15.0	-3	True	ATTAAA	-24
PB.11156.2	chr8	+	3054	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	69	2040	1	579	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	257	2014	20.0	-21	True	ATTAAA	-15
PB.345.5	chr1	-	2672	9	novel_in_catalog	SLC2A1	novel	3670	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	1088809	junction_8	365517.40395910013	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	220	996	35.0	-3	True	TATAAA	-15
PB.10148.8	chr6	+	1522	11	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	419	junction_1	9846.886886727196	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	314	1489	15.0	7	True	AATAAA	-17
PB.10148.9	chr6	+	1857	9	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	5997	junction_2	6793.73298985911	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	197	952	15.0	24	False	AATAAA	-13
PB.807.25	chr1	-	2713	1	novel_in_catalog	YY1AP1	novel	2690	10	NA	NA	-8	-13327	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	8	True	NA	NA
PB.10353.3	chr7	+	4120	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	7518	junction_6	190391.59027289	NA	3	NA	TRUE	NA	NA	NA	B	coding	822	2469	80	2548	40.0	-28	True	AATAAA	-23
PB.10148.4	chr6	+	2230	10	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	8530	junction_7	19740.22020028033	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	353	1291	35.0	-2	True	AATAAA	-23
PB.10148.5	chr6	+	2397	11	full-splice_match	CEP57L1	ENST00000517392.5	2771	11	357	17	0	5	multi-exon	FALSE	canonical	1	2264	junction_1	19687.06717619463	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	70	1452	35.0	0	True	AATAAA	-29
PB.10148.6	chr6	+	1905	12	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	8530	junction_9	18533.33582476151	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	325	1707	20.0	0	True	AATAAA	-20
PB.10148.7	chr6	+	1786	8	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	9203	junction_2	5767.741099230711	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	126	881	15.0	0	True	AATAAA	-13
PB.10148.1	chr6	+	2666	12	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	8530	junction_9	18533.33582476151	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	338	1720	35.0	-13	True	AATAAA	-30
PB.10148.2	chr6	+	1991	8	novel_in_catalog	CEP57L1	novel	3832	8	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	1	10482	junction_1	8639.779225259432	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	328	1083	15.0	-3	True	AATAAA	-16
PB.10148.3	chr6	+	1735	7	full-splice_match	CEP57L1	ENST00000519095.5	908	7	-5	-822	2	3	multi-exon	FALSE	canonical	1	2264	junction_1	7611.026620780026	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	73	828	15.0	-3	True	AATAAA	-15
PB.6151.2	chr19	+	3882	16	novel_in_catalog	TBC1D17	novel	2366	17	NA	NA	-9	0	intron_retention	FALSE	canonical	1	77744	junction_14	165588.53013292383	NA	4	NA	TRUE	NA	NA	NA	C	coding	512	1539	1897	3435	5.0	-9892	False	ATTAAA	-18
PB.6151.3	chr19	+	2164	17	novel_in_catalog	TBC1D17	novel	2366	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	77744	junction_15	160602.09195978544	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	23	1720	5.0	-3	True	ATTAAA	-15
PB.6054.8	chr19	+	3880	6	novel_in_catalog	ZNF224	novel	547	5	NA	NA	81	-61	combination_of_known_junctions	FALSE	canonical	1	21336	junction_1	36960.69515363584	NA	5	1	TRUE	NA	NA	NA	C	coding	707	2124	216	2339	15.0	61	False	AATAAA	-17
PB.6054.9	chr19	+	3472	6	full-splice_match	ZNF224	ENST00000336976.10	3980	6	-19	527	-14	-527	multi-exon	FALSE	canonical	1	19781	junction_1	37536.3178673668	NA	2	NA	TRUE	NA	NA	NA	C	coding	707	2124	274	2397	30.0	12	True	TATAAA	-13
PB.1049.11	chr1	+	3654	1	incomplete-splice_match	ATP2B4	ENST00000357681.9	8968	21	113865	2	12958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-537	False	AATAAA	-18
PB.6151.4	chr19	+	3024	17	novel_in_catalog	TBC1D17	novel	2366	17	NA	NA	2	0	intron_retention	FALSE	canonical	1	45841	junction_3	165198.06016442762	NA	1	1	TRUE	NA	NA	NA	C	coding	299	900	2000	2899	5.0	-1	True	ATTAAA	-19
PB.6054.2	chr19	+	3967	6	full-splice_match	ZNF224	ENST00000336976.10	3980	6	-42	55	11	-55	multi-exon	FALSE	canonical	1	19781	junction_1	37536.3178673668	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	297	2420	20.0	-11	True	AATAAA	-23
PB.6054.3	chr19	+	3545	6	novel_in_catalog	ZNF224	novel	547	5	NA	NA	11	-519	combination_of_known_junctions	FALSE	canonical	1	21336	junction_1	36960.69515363584	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	339	2462	20.0	-11	True	TATAAA	-21
PB.6054.1	chr19	+	1585	1	full-splice_match	ZNF224	ENST00000589060.1	1552	1	-52	19	-1	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-74	False	NA	NA
PB.6054.6	chr19	+	3119	6	novel_in_catalog	ZNF224	novel	547	5	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	1613	junction_1	44354.54613182283	NA	2	NA	TRUE	NA	NA	NA	C	coding	707	2124	956	3079	35.0	0	True	AATAAA	-21
PB.6054.7	chr19	+	2491	6	novel_in_catalog	ZNF224	novel	547	5	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	21336	junction_1	36960.69515363584	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	328	2451	35.0	0	True	AATAAA	-21
PB.6054.4	chr19	+	5835	5	novel_in_catalog	ZNF224	novel	547	5	NA	NA	11	-41	intron_retention	FALSE	canonical	1	89599	junction_2	15778.692998787954	NA	3	NA	TRUE	NA	NA	NA	C	coding	707	2124	2151	4274	40.0	-11	True	AATAAA	-37
PB.6054.5	chr19	+	2455	6	full-splice_match	ZNF224	ENST00000336976.10	3980	6	-38	1563	15	-3	multi-exon	FALSE	canonical	1	19781	junction_1	37536.3178673668	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	293	2416	35.0	-7	True	AATAAA	-20
PB.5931.1	chr19	-	4116	1	full-splice_match	TMEM147-AS1	ENST00000588286.1	3911	1	637	-842	185	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	2022	2321	25.0	1130	False	NA	NA
PB.5931.2	chr19	-	4653	2	incomplete-splice_match	TMEM147-AS1	ENST00000589137.5	1627	4	472	1	-54	0	intron_retention	FALSE	canonical	1	68389	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	2724	3023	25.0	-1	True	NA	NA
PB.5931.5	chr19	-	3982	1	full-splice_match	TMEM147-AS1	ENST00000588286.1	3911	1	-71	0	-60	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	99	300	2730	3029	25.0	-7	True	AATAAA	-28
PB.5931.4	chr19	-	2988	4	novel_not_in_catalog	TMEM147-AS1	novel	1627	4	NA	NA	-63	0	intron_retention	FALSE	canonical	1	1386	junction_3	35872.58965654232	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-10	True	NA	NA
PB.1056.2	chr1	-	7766	34	novel_in_catalog	PIK3C2B	novel	7686	34	NA	NA	-80	-10	intron_retention	FALSE	canonical	1	6930	junction_33	40024.911345863846	NA	0	NA	TRUE	NA	NA	NA	B	coding	1634	4905	650	5554	65.0	0	True	AATAAA	-12
PB.8863.3	chr4	+	2773	12	full-splice_match	GPAT3	ENST00000264409.4	2625	12	-151	3	-47	0	multi-exon	FALSE	canonical	1	78424	junction_1	23982.02385603444	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	364	1668	25.0	-223	False	AATAAA	-13
PB.11570.1	chr9	-	2859	1	genic	AL590399.1	novel	NA	NA	NA	NA	-29	121	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.6026.1	chr19	+	3027	3	novel_not_in_catalog	ZNF574	novel	3309	2	NA	NA	-25	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	63527.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	167	2857	25.0	-44	True	AATAAA	-16
PB.8392.9	chr3	-	2087	8	novel_in_catalog	MBD4	novel	2478	8	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	1	35406	junction_1	180119.05904853772	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	189	1793	45.0	7	True	AATAAA	-21
PB.6026.2	chr19	+	3069	2	full-splice_match	ZNF574	ENST00000359044.4	2940	2	-19	-110	-19	-34	multi-exon	FALSE	canonical	1	127054	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	161	2851	65.0	-38	True	CATAAA	-41
PB.10698.1	chr7	+	2630	5	incomplete-splice_match	BUD31	ENST00000403633.6	1139	6	302	2	-26	-2	intron_retention	FALSE	canonical	1	822965	junction_1	408403.46134490584	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	228	665	10.0	-26	True	AATAAA	-16
PB.10698.2	chr7	+	1051	6	full-splice_match	BUD31	ENST00000222969.9	1035	6	-9	-7	0	-1	multi-exon	FALSE	canonical	1	473025	junction_1	492366.198898584	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	443	877	10.0	0	True	AATAAA	-17
PB.9930.1	chr6	+	2711	2	full-splice_match	ZBTB9	ENST00000395064.2	2716	2	4	1	4	-1	multi-exon	FALSE	canonical	1	48722	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	473	1422	265	1686	30.0	0	True	AATAAA	-23
PB.7943.10	chr3	-	5408	15	novel_in_catalog	RAF1	novel	3300	17	NA	NA	6	-3	intron_retention	FALSE	canonical	1	579216	junction_14	172840.02122601168	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	334	2001	15.0	-3	True	AATAAA	-19
PB.2466.5	chr12	-	1559	11	novel_not_in_catalog	YBX3	novel	1708	9	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	891774.8697084988	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	641	961	35.0	1	True	AATAAA	-18
PB.2466.4	chr12	-	1775	11	novel_not_in_catalog	YBX3	novel	1708	9	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	891774.8697084988	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	863	1219	35.0	-6	True	AATAAA	-19
PB.3362.3	chr14	+	3845	4	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	104	11556	any annotated donor/acceptor	FALSE	canonical	1	761	junction_2	1172.4891849773664	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-22	False	NA	NA
PB.3362.2	chr14	+	2857	3	full-splice_match	AL136018.1	ENST00000557736.5	636	3	89	-2310	89	2310	multi-exon	FALSE	canonical	1	1269	junction_2	463.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-37	False	NA	NA
PB.2466.1	chr12	-	1566	10	novel_not_in_catalog	YBX3	novel	1708	9	NA	NA	-12	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	935668.4372474374	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	652	1008	30.0	-2	True	AATAAA	-21
PB.3362.4	chr14	+	2894	4	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	123	2315	any annotated donor/acceptor	FALSE	canonical	1	406	junction_3	780.2385675049794	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-3	True	NA	NA
PB.2466.3	chr12	-	1988	10	full-splice_match	YBX3	ENST00000228251.8	1796	10	-69	-123	-69	-1	multi-exon	FALSE	canonical	1	86693	junction_9	859894.789478226	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	271	1389	35.0	-59	True	AATAAA	-19
PB.4206.2	chr16	-	4479	4	full-splice_match	ZNF597	ENST00000301744.6	5524	4	49	996	49	-996	multi-exon	FALSE	canonical	1	23581	junction_1	7933.906029749085	NA	2	NA	TRUE	NA	NA	NA	C	coding	424	1275	199	1473	15.0	-1	True	AATAAA	-12
PB.6971.16	chr2	+	4132	12	full-splice_match	FASTKD2	ENST00000402774.7	2586	12	174	-1720	0	1100	multi-exon	FALSE	canonical	1	119828	junction_1	88115.38095067538	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	193	2325	30.0	0	True	ATTAAA	-21
PB.3362.8	chr14	+	3406	5	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	-124	11549	any annotated donor/acceptor	FALSE	canonical	1	13	junction_3	1387.4880855344309	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	12	False	NA	NA
PB.6971.14	chr2	+	3590	12	full-splice_match	FASTKD2	ENST00000402774.7	2586	12	166	-1170	-8	550	multi-exon	FALSE	canonical	1	119828	junction_1	88115.38095067538	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	201	2333	60.0	-8	True	NA	NA
PB.6971.15	chr2	+	3029	12	full-splice_match	FASTKD2	ENST00000402774.7	2586	12	172	-615	-2	-5	multi-exon	FALSE	canonical	1	119828	junction_1	88115.38095067538	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	195	2327	35.0	-2	True	ATTAAA	-23
PB.6971.12	chr2	+	4253	13	novel_not_in_catalog	FASTKD2	novel	3188	12	NA	NA	-8	3675	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	127143.6910949576	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	201	2333	30.0	-8	True	AATAAA	-18
PB.6971.13	chr2	+	3619	13	novel_not_in_catalog	FASTKD2	novel	3188	12	NA	NA	-8	711	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	127143.6910949576	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	201	2333	100.0	-8	True	NA	NA
PB.6971.10	chr2	+	2392	12	full-splice_match	FASTKD2	ENST00000402774.7	2586	12	187	7	13	-7	multi-exon	FALSE	canonical	1	119828	junction_1	88115.38095067538	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	180	2312	35.0	13	True	AATAAA	-27
PB.6971.11	chr2	+	2364	12	full-splice_match	FASTKD2	ENST00000402774.7	2586	12	164	58	-10	25	multi-exon	FALSE	canonical	1	119828	junction_1	88115.38095067538	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	203	2335	45.0	-10	True	AATAAA	-29
PB.9000.5	chr4	+	3754	8	novel_in_catalog	ZNF330	novel	733	2	NA	NA	1	-215	intron_retention	FALSE	canonical	1	353296	junction_1	90410.58548395216	NA	0	NA	TRUE	NA	NA	NA	B	coding	276	831	2431	3261	30.0	-18	True	ATTAAA	-17
PB.8716.1	chr4	-	3913	17	incomplete-splice_match	ADGRA3	ENST00000334304.9	4566	19	54291	9	-5929	-9	5prime_fragment	FALSE	canonical	1	7070	junction_13	84324.76243286651	NA	1	NA	TRUE	NA	NA	NA	A	coding	1124	3375	218	3592	15.0	NA	False	AATAAA	-13
PB.3130.4	chr13	+	4424	21	novel_in_catalog	NAA16	novel	4347	20	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	51641	junction_13	22602.087994032765	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	260	1852	10.0	3	True	AATAAA	-17
PB.3130.2	chr13	+	4329	20	full-splice_match	NAA16	ENST00000379406.7	4347	20	26	-8	26	8	multi-exon	TRUE	canonical	1	57764	junction_13	20049.222901886475	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	299	2893	10.0	-36	True	AATAAA	-26
PB.3130.3	chr13	+	3346	8	incomplete-splice_match	NAA16	ENST00000403412.7	1751	11	-23	25182	-23	-3151	3prime_fragment	FALSE	canonical	1	92614	junction_2	17080.340082882976	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	273	1247	5.0	-10	True	NA	NA
PB.3130.1	chr13	+	2165	15	incomplete-splice_match	NAA16	ENST00000379406.7	4347	20	22	7831	22	-5	3prime_fragment	FALSE	canonical	1	57764	junction_13	22339.819805879895	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1863	303	2165	80.0	-40	True	NA	NA
PB.995.9	chr1	-	5518	14	novel_in_catalog	IVNS1ABP	novel	3776	8	NA	NA	-10	-5	intron_retention	FALSE	canonical	1	480060	junction_13	335929.9970800129	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	2968	3876	35.0	569	False	AATAAA	-23
PB.11061.4	chr8	+	3591	5	novel_in_catalog	EXTL3	novel	548	5	NA	NA	-104	-1	no_combination_of_known_junctions	FALSE	canonical	1	1791	junction_1	108896.9208988482	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	274	771	15.0	0	True	AATAAA	-23
PB.4793.4	chr17	-	2416	6	novel_in_catalog	ZNF287	novel	3373	6	NA	NA	-7	15	intron_retention	FALSE	canonical	1	4920	junction_5	33272.553803998875	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1026	1391	2416	30.0	-10	True	AATAAA	-34
PB.11372.1	chr8	+	3431	12	novel_in_catalog	RHPN1	novel	3683	15	NA	NA	-60	47	intron_retention	FALSE	canonical	1	116652	junction_1	79149.19651973108	NA	1	1	TRUE	NA	NA	NA	C	coding	253	762	162	923	15.0	2	True	ATTAAA	-34
PB.11341.1	chr8	+	1992	12	novel_in_catalog	PVT1	novel	754	3	NA	NA	-12	1	no_combination_of_known_junctions	FALSE	canonical	1	4182	junction_5	62317.554435141785	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-21	True	NA	NA
PB.6624.1	chr2	-	5974	1	full-splice_match	AC009237.14	ENST00000609975.1	1594	1	-46	-4334	-46	4334	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	139	420	1169	1588	45.0	-10	True	AATAAA	-18
PB.6624.2	chr2	-	1773	1	full-splice_match	AC009237.14	ENST00000609975.1	1594	1	-40	-139	-40	139	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	104	315	1	315	15.0	-4	True	AATAAA	-19
PB.8575.5	chr3	-	2455	10	full-splice_match	LIPH	ENST00000296252.8	4026	10	30	1541	-25	263	multi-exon	FALSE	canonical	1	48668	junction_9	5250.629424937994	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	497	1468	55.0	1	True	NA	NA
PB.3056.19	chr13	+	4461	10	novel_not_in_catalog	TNFRSF19	novel	3276	10	NA	NA	47	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	44050.91092372412	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	467	1312	25.0	5	True	AATAAA	-20
PB.3056.18	chr13	+	4094	7	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	45	-1	no_combination_of_known_junctions	FALSE	canonical	1	2153	junction_1	51965.32323498687	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	651	1382	25.0	3	True	AATAAA	-20
PB.3056.17	chr13	+	1884	9	incomplete-splice_match	TNFRSF19	ENST00000248484.8	3276	10	42	5624	42	-8	3prime_fragment	FALSE	canonical	1	32776	junction_1	33161.08215565914	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	472	1743	60.0	0	True	AATAAA	-17
PB.3056.16	chr13	+	3650	1	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	42	-20350	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	134	405	461	865	100.0	0	True	NA	NA
PB.3056.15	chr13	+	3722	2	novel_not_in_catalog	TNFRSF19	novel	3276	10	NA	NA	42	-17643	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	134	405	461	865	35.0	0	True	NA	NA
PB.3056.14	chr13	+	4146	8	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	42	-1	no_combination_of_known_junctions	FALSE	canonical	1	1788	junction_5	46510.179280388475	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	472	1434	25.0	0	True	AATAAA	-20
PB.3056.13	chr13	+	3994	9	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	358	-2	no_combination_of_known_junctions	FALSE	canonical	1	2786	junction_6	45589.175246844505	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	156	1283	25.0	-8753	False	AATAAA	-19
PB.3056.12	chr13	+	4378	10	novel_not_in_catalog	TNFRSF19	novel	3276	10	NA	NA	42	-2	any annotated donor/acceptor	FALSE	canonical	1	296	junction_6	43557.32868244582	NA	5	NA	TRUE	NA	NA	NA	C	coding	290	873	472	1344	25.0	0	True	AATAAA	-19
PB.3056.11	chr13	+	1638	6	novel_not_in_catalog	TNFRSF19	novel	3276	10	NA	NA	380	35751	any annotated donor/acceptor	FALSE	canonical	1	2428	junction_5	53870.93481869421	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	134	646	5.0	1	True	NA	NA
PB.3056.10	chr13	+	3020	8	full-splice_match	TNFRSF19	ENST00000403372.6	4277	8	39	1218	39	-3	multi-exon	FALSE	canonical	1	2153	junction_1	38451.51742660052	NA	3	NA	TRUE	NA	NA	NA	C	coding	285	858	657	1514	0.0	-3	True	AGTAAA	-13
PB.9356.14	chr5	-	4632	20	novel_in_catalog	ERAP1	novel	5495	20	NA	NA	-26	-3	combination_of_known_junctions	FALSE	canonical	1	1803	junction_1	97998.19813330221	NA	3	NA	TRUE	NA	NA	NA	C	coding	953	2862	143	3004	35.0	-4	True	AATAAA	-18
PB.11108.13	chr8	+	4250	4	novel_in_catalog	AP3M2	novel	3669	10	NA	NA	1	-2190	intron_retention	FALSE	canonical	1	6922	junction_1	76024.45856579462	NA	4	1	TRUE	NA	NA	NA	C	coding	115	348	3392	3739	100.0	12	True	NA	NA
PB.11108.12	chr8	+	1745	9	full-splice_match	AP3M2	ENST00000396926.7	3545	9	53	1747	-10	219	multi-exon	FALSE	canonical	1	77525	junction_1	40858.02977001583	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	115	1371	65.0	1	True	AATGAA	-36
PB.9635.1	chr5	+	2121	11	full-splice_match	FAF2	ENST00000261942.6	4515	11	-45	2439	-45	-2439	multi-exon	TRUE	canonical	1	151212	junction_3	79676.84526862243	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	99	1436	10.0	-3613	False	AATAAA	-24
PB.11108.10	chr8	+	3633	9	novel_not_in_catalog	AP3M2	novel	3669	10	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	3531	junction_6	68581.57810946301	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	115	921	15.0	1	True	AATAAA	-16
PB.817.8	chr1	+	2300	11	full-splice_match	LMNA	ENST00000347559.6	3137	11	39	798	2	-12	multi-exon	FALSE	canonical	1	9947	junction_9	3434160.4976148335	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	211	2115	80.0	-2	True	NA	NA
PB.11108.15	chr8	+	2468	8	novel_in_catalog	AP3M2	novel	3669	10	NA	NA	-140	-835	intron_retention	FALSE	canonical	1	3364	junction_6	78137.7840424287	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	134	955	30.0	-1415	False	AAAACA	-38
PB.11108.14	chr8	+	3640	10	novel_in_catalog	AP3M2	novel	3669	10	NA	NA	13	0	intron_retention	FALSE	canonical	1	364	junction_1	74424.19933175526	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	262	1518	15.0	35	True	AATAAA	-18
PB.4318.8	chr16	+	2782	4	incomplete-splice_match	RBBP6	ENST00000567686.5	1138	10	1862	6727	-10	0	internal_fragment	FALSE	canonical	1	255844	junction_3	59833.2956657263	NA	3	NA	TRUE	NA	NA	NA	C	coding	123	372	1054	1425	10.0	-10	True	AATAAA	-13
PB.275.13	chr1	-	2350	16	full-splice_match	ZMYM6	ENST00000357182.8	4330	16	42	1938	9	-1938	multi-exon	FALSE	canonical	1	47968	junction_15	48925.17540008302	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2163	187	2349	55.0	18	True	NA	NA
PB.1166.14	chr1	-	3566	22	novel_in_catalog	PARP1	novel	3958	23	NA	NA	-11	294	no_combination_of_known_junctions	FALSE	canonical	1	1908	junction_5	448432.75878573075	NA	17	3	TRUE	NA	NA	NA	C	coding	981	2946	162	3107	15.0	-1	True	AATAAA	-19
PB.731.4	chr1	-	4704	22	novel_in_catalog	ARNT	novel	4887	22	NA	NA	-2	-11	combination_of_known_junctions	FALSE	canonical	1	21065	junction_12	93680.479315902	NA	2	NA	TRUE	NA	NA	NA	C	coding	784	2355	45	2399	30.0	125	False	ATTAAA	-14
PB.3682.18	chr14	+	2610	17	novel_not_in_catalog	MARK3	novel	2643	16	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	26	junction_1	185359.86435671517	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	368	2557	50.0	0	True	ATTAAA	-18
PB.7921.1	chr3	+	1430	6	full-splice_match	ARPC4	ENST00000397261.7	2582	6	531	621	-4	533	multi-exon	FALSE	canonical	1	1085857	junction_1	658015.7221040847	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	34	540	10.0	6	True	ATTAAA	-35
PB.4321.9	chr16	-	3156	18	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	374	junction_6	128631.63530927802	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	89	2419	40.0	-19	True	ATTAAA	-21
PB.4321.8	chr16	-	3208	19	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	4952	junction_11	135075.8968199698	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	830	2299	40.0	-23	True	ATTAAA	-21
PB.4321.7	chr16	-	3338	20	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	7081	junction_19	139269.29341878783	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	193	2601	40.0	-26	True	ATTAAA	-21
PB.4869.4	chr17	+	2070	1	incomplete-splice_match	TAOK1	ENST00000261716.7	12407	20	158335	900	26647	-900	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	1570	False	AAAAAG	-31
PB.4321.5	chr16	-	3228	19	full-splice_match	ARHGAP17	ENST00000303665.9	3219	19	-15	6	-5	-1	multi-exon	FALSE	canonical	1	164799	junction_18	95290.78668445002	NA	13	2	TRUE	NA	NA	NA	C	coding	803	2412	86	2497	45.0	-16	True	ATTAAA	-15
PB.4321.4	chr16	-	3540	21	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	103236	junction_2	123141.39394365934	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	109	2631	40.0	-39	True	ATTAAA	-21
PB.4321.3	chr16	-	3486	20	full-splice_match	ARHGAP17	ENST00000289968.10	3461	20	-33	8	-23	0	multi-exon	FALSE	canonical	1	164799	junction_19	105025.26299254736	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2646	104	2749	40.0	-34	True	ATTAAA	-21
PB.3682.11	chr14	+	2919	16	novel_not_in_catalog	MARK3	novel	2643	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_15	190130.15545373707	NA	5	1	TRUE	NA	NA	NA	C	coding	466	1401	1084	2484	50.0	-21	True	ATTAAA	-19
PB.2885.10	chr12	+	3217	24	incomplete-splice_match	UBE3B	ENST00000342494.7	5722	28	-7	10298	0	0	3prime_fragment	FALSE	canonical	1	92148	junction_1	41802.717377280205	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2613	603	3215	55.0	1	True	NA	NA
PB.4598.8	chr16	-	4486	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	19830	junction_2	807230.5788474843	NA	2	NA	TRUE	NA	NA	NA	C	coding	484	1455	86	1540	10.0	-3	True	AAGAAA	-15
PB.11866.9	chr9	-	6503	15	novel_not_in_catalog	SETX	novel	5730	17	NA	NA	18	-13136	any annotated donor/acceptor	FALSE	canonical	1	26206	junction_14	75947.04791390339	NA	0	NA	TRUE	NA	NA	NA	C	coding	2024	6072	432	6503	70.0	18	True	NA	NA
PB.8858.1	chr4	-	1522	7	full-splice_match	COQ2	ENST00000311469.9	1639	7	117	0	-2	0	multi-exon	FALSE	canonical	1	129507	junction_6	53267.4652529311	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	265	1149	15.0	-3	True	AATAAA	-13
PB.4887.4	chr17	+	2851	15	full-splice_match	NF1	ENST00000431387.8	2889	15	0	38	0	-38	multi-exon	FALSE	canonical	1	79204	junction_1	33413.298733362106	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	334	2115	15.0	0	True	NA	NA
PB.4887.5	chr17	+	10525	58	full-splice_match	NF1	ENST00000358273.8	12425	58	51	1849	1	1395	multi-exon	TRUE	canonical	1	79204	junction_1	55672.428279014326	NA	5	1	TRUE	NA	NA	NA	C	coding	2839	8520	333	8852	55.0	1	True	AATAAA	-19
PB.11866.6	chr9	-	2638	14	incomplete-splice_match	SETX	ENST00000436441.5	5730	17	14923	2464	-10436	-2464	5prime_fragment	TRUE	canonical	1	112377	junction_1	113986.89430646462	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	147	2219	65.0	NA	False	TTTAAA	-40
PB.4887.1	chr17	+	1830	13	incomplete-splice_match	NF1	ENST00000487476.5	2265	14	-22	4876	-22	-4876	3prime_fragment	FALSE	canonical	1	79204	junction_1	33673.18453522113	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1425	406	1830	60.0	-22	True	AAAAAG	-12
PB.4887.2	chr17	+	4609	32	novel_not_in_catalog	NF1	novel	2265	14	NA	NA	-15	-1320	any annotated donor/acceptor	TRUE	canonical	1	1289	junction_2	60343.12198096805	NA	1	NA	TRUE	NA	NA	NA	C	coding	1314	3942	666	4607	80.0	-15	True	AATAAA	-9
PB.4887.3	chr17	+	4497	31	incomplete-splice_match	NF1	ENST00000358273.8	12425	58	31	124705	-19	-1320	3prime_fragment	FALSE	canonical	1	79204	junction_1	46527.66519133178	NA	0	NA	TRUE	NA	NA	NA	C	coding	1381	4143	353	4495	80.0	-5	True	AATAAA	-9
PB.11098.33	chr8	+	4711	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	99	-276	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175210.26939279048	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	403	2235	40.0	34	False	AATAAA	-13
PB.3263.21	chr13	-	7849	3	incomplete-splice_match	ANKRD10	ENST00000310847.8	1193	5	-62	6081	1	5258	3prime_fragment	FALSE	canonical	1	465043	junction_2	30246.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	152	459	135	593	100.0	109	False	NA	NA
PB.7192.3	chr20	-	2909	6	novel_not_in_catalog	RBBP9	novel	3861	5	NA	NA	-12	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67230.04847060576	NA	7	NA	TRUE	NA	NA	NA	C	coding	186	561	89	649	40.0	-1	True	ATTAAA	-13
PB.858.34	chr1	-	2969	1	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	8229	1250	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	119	360	1212	1571	90.0	8314	False	NA	NA
PB.5560.1	chr19	+	785	7	full-splice_match	GPX4	ENST00000611653.4	793	7	11	-3	-4	3	multi-exon	FALSE	canonical	1	5120724	junction_1	630491.3082354682	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	0	True	AATAAA	-16
PB.11098.32	chr8	+	2338	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	93	-12	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175210.26939279048	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	409	2241	80.0	28	False	NA	NA
PB.731.6	chr1	-	4307	22	novel_in_catalog	ARNT	novel	4887	22	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	1	21065	junction_12	93680.479315902	NA	2	1	TRUE	NA	NA	NA	C	coding	784	2355	30	2384	20.0	-1	True	NA	NA
PB.4897.3	chr17	+	1630	15	novel_not_in_catalog	PSMD11	novel	4098	14	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	193	junction_7	473215.75897759345	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	35	712	85.0	-20	True	NA	NA
PB.4897.2	chr17	+	1501	14	full-splice_match	PSMD11	ENST00000261712.7	4098	14	241	2356	-2	0	multi-exon	FALSE	canonical	1	912256	junction_1	170057.46522512002	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	23	1291	90.0	-8	True	NA	NA
PB.4897.1	chr17	+	1652	13	full-splice_match	PSMD11	ENST00000457654.6	2159	13	-2	509	-2	0	multi-exon	FALSE	canonical	1	912256	junction_1	174643.38777259074	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	53	1321	90.0	-38	True	NA	NA
PB.7192.4	chr20	-	3546	5	full-splice_match	RBBP9	ENST00000337227.8	3861	5	-2	317	-2	-317	multi-exon	FALSE	canonical	1	115887	junction_3	36333.487861578884	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	79	639	15.0	9	False	ATTAAA	-23
PB.6373.1	chr2	+	7364	43	novel_in_catalog	CAD	novel	7265	44	NA	NA	-30	4	intron_retention	FALSE	canonical	1	219116	junction_13	138561.60952208962	NA	23	2	TRUE	NA	NA	NA	C	coding	1261	3786	3308	7093	35.0	-4423	False	AATAAA	-23
PB.6373.2	chr2	+	6941	43	full-splice_match	CAD	ENST00000403525.5	6900	43	-41	0	-23	0	multi-exon	FALSE	canonical	1	13403	junction_12	149920.55193536068	NA	0	NA	TRUE	NA	NA	NA	C	coding	2162	6489	186	6674	35.0	-2	True	AATAAA	-19
PB.2304.1	chr11	+	3565	6	incomplete-splice_match	KMT2A	ENST00000531904.6	4320	10	35149	1841	4108	737	internal_fragment	FALSE	canonical	1	163584	junction_1	33882.88379344356	NA	16	NA	TRUE	NA	NA	NA	A	coding	944	2832	732	3563	80.0	NA	False	AAAAAG	-26
PB.6373.4	chr2	+	7121	44	full-splice_match	CAD	ENST00000264705.8	7265	44	-8	152	-8	6	multi-exon	FALSE	canonical	1	219116	junction_13	138211.48933067676	NA	0	NA	TRUE	NA	NA	NA	C	coding	2225	6678	171	6848	35.0	13	True	AATAAA	-25
PB.6373.5	chr2	+	7223	45	novel_not_in_catalog	CAD	novel	7265	44	NA	NA	5	1	any annotated donor/acceptor	FALSE	canonical	1	17487	junction_28	160120.35266827611	NA	0	NA	TRUE	NA	NA	NA	C	coding	2265	6798	158	6955	30.0	26	True	AATAAA	-20
PB.2388.2	chr12	+	4451	19	full-splice_match	ERC1	ENST00000360905.8	5789	19	-70	1408	-5	0	multi-exon	FALSE	canonical	1	23958	junction_1	63002.11582712476	NA	1	NA	TRUE	NA	NA	NA	C	coding	1116	3351	252	3602	75.0	3	True	NA	NA
PB.2388.3	chr12	+	4587	19	novel_in_catalog	ERC1	novel	546	2	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	26277	junction_1	62698.458482733935	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	383	3733	65.0	-1	True	NA	NA
PB.8742.12	chr4	-	3499	24	incomplete-splice_match	RFC1	ENST00000349703.6	4859	25	-32	2395	-8	-295	3prime_fragment	FALSE	canonical	1	216789	junction_23	75747.5609436446	NA	0	NA	TRUE	NA	NA	NA	C	coding	1119	3357	143	3499	35.0	-22	True	NA	NA
PB.2388.1	chr12	+	2211	10	incomplete-splice_match	ERC1	ENST00000360905.8	5789	19	-80	310488	10	40259	3prime_fragment	FALSE	canonical	1	23958	junction_1	52572.89688507652	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1950	262	2211	55.0	-7	True	NA	NA
PB.11098.31	chr8	+	3296	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	88	552	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175210.26939279048	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	414	2246	35.0	23	False	ATTAAA	-27
PB.731.1	chr1	-	4690	21	full-splice_match	ARNT	ENST00000505755.5	2427	21	-12	-2251	-12	-5	multi-exon	FALSE	canonical	1	85430	junction_17	85691.6610764869	NA	4	NA	TRUE	NA	NA	NA	C	coding	774	2325	55	2379	15.0	115	False	ATTAAA	-20
PB.2388.4	chr12	+	2304	10	novel_in_catalog	ERC1	novel	546	2	NA	NA	-8	40259	combination_of_known_junctions	FALSE	canonical	1	26277	junction_1	51992.757685833305	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1950	355	2304	55.0	-8	True	NA	NA
PB.7841.3	chr22	-	2536	3	novel_not_in_catalog	A4GALT	novel	2141	3	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	5098	junction_1	27073.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	707	1768	10.0	10	True	AATAAA	-15
PB.7841.2	chr22	-	2094	3	full-splice_match	A4GALT	ENST00000642412.1	2141	3	40	7	-8	2	multi-exon	FALSE	canonical	1	59245	junction_2	12507.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	262	1323	10.0	-1	True	AATAAA	-18
PB.7841.1	chr22	-	2022	3	full-splice_match	A4GALT	ENST00000381278.4	1956	3	-51	-15	-8	5	multi-exon	FALSE	canonical	1	11450	junction_1	23897.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	178	1239	20.0	-1	True	AATAAA	-30
PB.298.7	chr1	-	2369	5	novel_in_catalog	C1orf109	novel	2355	5	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	1	1575	junction_4	96037.63176061507	NA	0	NA	TRUE	NA	NA	NA	B	coding	218	657	209	865	50.0	10	True	AATAAA	-5
PB.298.5	chr1	-	2434	5	novel_in_catalog	C1orf109	novel	2355	5	NA	NA	-21	-7	combination_of_known_junctions	FALSE	canonical	1	3076	junction_3	92779.41612502203	NA	1	NA	TRUE	NA	NA	NA	B	coding	175	528	144	671	50.0	-25	True	AATAAA	-5
PB.7841.4	chr22	-	2387	3	full-splice_match	A4GALT	ENST00000483026.2	546	3	8	-1849	-2	0	multi-exon	FALSE	canonical	1	3290	junction_1	27977.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	558	1619	10.0	4	True	AATAAA	-15
PB.858.32	chr1	-	1029	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-4	2842	any annotated donor/acceptor	FALSE	canonical	1	17902	junction_1	101727.90867581795	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	81	791	25.0	-4	True	AATAAA	-18
PB.8881.8	chr4	-	4196	23	novel_in_catalog	FAM13A	novel	4945	17	NA	NA	-4	-14	intron_retention	FALSE	canonical	1	20295	junction_20	50083.623224228984	NA	1	NA	TRUE	NA	NA	NA	C	coding	814	2445	662	3106	75.0	-6	True	NA	NA
PB.11101.3	chr8	+	4155	22	full-splice_match	ADAM9	ENST00000487273.6	3839	22	-59	-257	58	114	multi-exon	FALSE	canonical	1	478626	junction_1	220440.27360426018	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	138	2597	30.0	-46	True	ATTAAA	-17
PB.11098.30	chr8	+	4221	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	65	-800	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175210.26939279048	NA	2	NA	TRUE	NA	NA	NA	C	coding	610	1833	437	2269	0.0	0	True	AAGAAA	-20
PB.8881.9	chr4	-	2603	4	incomplete-splice_match	FAM13A	ENST00000512339.5	1511	6	-35	80920	-13	-4	3prime_fragment	FALSE	canonical	1	20295	junction_1	31379.466757738253	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	222	674	35.0	-15	True	NA	NA
PB.11185.2	chr8	-	3023	15	full-splice_match	STAU2	ENST00000524300.5	3065	15	42	0	-7	0	multi-exon	FALSE	canonical	1	14708	junction_12	90381.32276448583	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	310	2022	10.0	575	False	AGTAAA	-22
PB.5024.10	chr17	-	2131	12	novel_not_in_catalog	ETV4	novel	2147	12	NA	NA	32	-1	any annotated donor/acceptor	FALSE	canonical	1	7556	junction_7	85190.74117968338	NA	2	1	TRUE	NA	NA	NA	C	coding	478	1437	23	1459	10.0	714	False	AATAAA	-17
PB.173.2	chr1	-	4428	6	novel_in_catalog	IFNLR1	novel	4549	7	NA	NA	-24	-21	no_combination_of_known_junctions	FALSE	canonical	1	3985	junction_5	12576.345437367725	NA	3	NA	TRUE	NA	NA	NA	C	coding	437	1314	163	1476	60.0	-29	True	AATAAA	-14
PB.8877.12	chr4	+	3261	21	novel_in_catalog	HERC5	novel	3513	23	NA	NA	2	-23	no_combination_of_known_junctions	FALSE	canonical	1	4929	junction_13	65331.06032391867	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	152	3001	75.0	0	True	NA	NA
PB.5065.28	chr17	-	2921	19	full-splice_match	CDC27	ENST00000066544.7	5801	19	-5	2885	-5	22	multi-exon	FALSE	canonical	1	62581	junction_12	149987.14950244	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	100	2574	20.0	-1	True	NA	NA
PB.5065.29	chr17	-	1336	11	incomplete-splice_match	CDC27	ENST00000527547.5	2579	19	-70	21513	-28	35	3prime_fragment	FALSE	canonical	1	62581	junction_4	95143.31500131788	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1212	123	1334	75.0	-24	True	ATTAAA	-25
PB.5065.26	chr17	-	3036	19	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-36	173	combination_of_known_junctions	FALSE	canonical	1	26970	junction_2	147000.5170187431	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	131	2437	30.0	-32	True	AATAAA	-20
PB.5065.27	chr17	-	2979	19	full-splice_match	CDC27	ENST00000527547.5	2579	19	-28	-372	0	102	multi-exon	FALSE	canonical	1	62581	junction_12	147705.2233235566	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	81	2552	30.0	18	True	GATAAA	-18
PB.5065.24	chr17	-	3292	19	full-splice_match	CDC27	ENST00000066544.7	5801	19	-45	2554	-45	-2	multi-exon	FALSE	canonical	1	62581	junction_12	149987.14950244	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	140	2614	20.0	26	False	NA	NA
PB.2168.1	chr11	+	4096	14	novel_in_catalog	SLCO2B1	novel	582	3	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	1	5891	junction_1	31238.23862212813	NA	0	NA	TRUE	NA	NA	NA	A	coding	687	2064	357	2420	35.0	-26	True	NA	NA
PB.10326.6	chr6	-	2092	1	novel_in_catalog	SFT2D1	novel	1079	8	NA	NA	-2470	-5913	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	8732	False	NA	NA
PB.5065.23	chr17	-	3301	19	novel_in_catalog	CDC27	novel	5801	19	NA	NA	0	51	combination_of_known_junctions	FALSE	canonical	1	42428	junction_11	152678.4472806319	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	81	2570	15.0	18	True	TTTAAA	-14
PB.5065.20	chr17	-	4080	19	full-splice_match	CDC27	ENST00000066544.7	5801	19	-8	1729	-8	823	multi-exon	FALSE	canonical	1	62581	junction_12	149987.14950244	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	103	2577	45.0	-4	True	NA	NA
PB.5065.21	chr17	-	4036	19	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-28	823	combination_of_known_junctions	FALSE	canonical	1	26970	junction_2	148901.9063556982	NA	2	1	TRUE	NA	NA	NA	C	coding	769	2310	123	2432	45.0	-24	True	NA	NA
PB.11551.1	chr9	+	2981	2	full-splice_match	ALDH1B1	ENST00000377698.3	3066	2	87	-2	39	2	multi-exon	FALSE	canonical	1	350081	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	67	1620	15.0	-14	True	AATAAA	-24
PB.3052.13	chr13	-	4550	13	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	84058.82422132861	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	1	1269	20.0	-105	False	AATAAA	-16
PB.3052.12	chr13	-	4586	14	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	38	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67003.02556261455	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	161	1258	20.0	-64	True	AATAAA	-16
PB.3052.11	chr13	-	4800	11	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	12	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	94510.30846103508	NA	2	2	TRUE	NA	NA	NA	C	coding	204	615	509	1123	20.0	-90	True	AATAAA	-16
PB.3052.10	chr13	-	4944	13	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	84058.82422132861	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	199	1266	25.0	-102	True	AATAAA	-17
PB.3052.17	chr13	-	2784	12	novel_in_catalog	ZDHHC20	novel	5338	12	NA	NA	0	993	combination_of_known_junctions	FALSE	canonical	1	1172	junction_6	82129.02053174707	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	200	1267	15.0	-103	True	AATAAA	-20
PB.3052.16	chr13	-	3890	13	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	-7	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	84058.82422132861	NA	1	1	TRUE	NA	NA	NA	C	coding	422	1269	6	1274	15.0	-110	False	AATAAA	-15
PB.3052.15	chr13	-	5005	14	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	30	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67003.02556261455	NA	2	NA	TRUE	NA	NA	NA	C	coding	365	1098	169	1266	20.0	-72	True	AATAAA	-16
PB.4783.3	chr17	-	2384	6	incomplete-splice_match	TRIM16	ENST00000336708.11	2900	9	31229	0	-8375	0	5prime_fragment	FALSE	canonical	1	240178	junction_2	83903.14836190594	NA	1	NA	TRUE	NA	NA	NA	A	coding	564	1695	42	1736	25.0	-6	True	AATAAA	-15
PB.5280.8	chr17	+	3367	11	novel_in_catalog	SEPT9	novel	3821	12	NA	NA	-11	0	intron_retention	FALSE	canonical	1	3036	junction_1	1280250.5246214468	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	426	1433	35.0	-14	True	AATAAA	-21
PB.5280.9	chr17	+	3312	11	novel_not_in_catalog	SEPT9	novel	3821	12	NA	NA	-11	0	intron_retention	FALSE	canonical	1	89	junction_1	1314713.8181187608	NA	5	NA	TRUE	NA	NA	NA	C	coding	335	1008	371	1378	35.0	-14	True	AATAAA	-21
PB.5280.2	chr17	+	3909	11	novel_in_catalog	SEPT9	novel	582	2	NA	NA	1	0	intron_retention	FALSE	canonical	1	6331	junction_1	1170985.7570130604	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	705	1973	30.0	-6	True	AATAAA	-23
PB.1336.1	chr10	+	2317	5	full-splice_match	APBB1IP	ENST00000356785.4	1513	5	-261	-543	-39	543	multi-exon	FALSE	canonical	1	149434	junction_1	83744.7232621256	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	495	1013	55.0	-11	True	NA	NA
PB.1336.2	chr10	+	2631	15	full-splice_match	APBB1IP	ENST00000376236.8	2771	15	138	2	-84	-2	multi-exon	FALSE	canonical	1	149434	junction_1	114358.79120479294	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	318	2318	40.0	-16	True	AATAAA	-19
PB.5280.1	chr17	+	3763	12	full-splice_match	SEPT9	ENST00000427177.5	3821	12	58	0	17	0	multi-exon	FALSE	canonical	1	211502	junction_1	1256120.5911891668	NA	2	NA	TRUE	NA	NA	NA	C	coding	586	1761	69	1829	35.0	-34	True	AATAAA	-21
PB.1336.4	chr10	+	2648	16	novel_not_in_catalog	APBB1IP	novel	2771	15	NA	NA	2	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	147811.42715251155	NA	6	1	TRUE	NA	NA	NA	C	coding	627	1884	454	2337	35.0	2	True	AATAAA	-17
PB.4783.1	chr17	-	2500	11	novel_in_catalog	AC005324.3	novel	5514	17	NA	NA	-32656	-56475	intron_retention	FALSE	canonical	1	18970	junction_7	164850.2433198083	NA	2	NA	TRUE	NA	NA	NA	A	coding	348	1047	805	1851	20.0	1	True	AATAAA	-16
PB.1336.6	chr10	+	2320	15	novel_not_in_catalog	APBB1IP	novel	2771	15	NA	NA	321	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	140614.96071471565	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	109	2007	40.0	-29	True	AATAAA	-19
PB.5280.5	chr17	+	2809	9	novel_not_in_catalog	SEPT9	novel	582	2	NA	NA	-48	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	1146057.4597974394	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	186	881	35.0	-31	True	AATAAA	-15
PB.817.7	chr1	+	2007	12	full-splice_match	LMNA	ENST00000368300.8	3190	12	397	786	382	0	multi-exon	FALSE	canonical	1	1221595	junction_11	3047718.3287420957	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	374	1810	75.0	-9780	False	AAAACA	-6
PB.277.14	chr1	-	2241	10	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	3	-677	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	1637357.3825681566	NA	1	1	TRUE	NA	NA	NA	C	coding	351	1056	339	1394	35.0	-1	True	ATTAAA	-7
PB.3848.8	chr15	+	2733	2	full-splice_match	SLC24A5	ENST00000482911.2	2984	2	15	236	-5	-236	multi-exon	FALSE	canonical	1	23148	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	27	395	75.0	-8	True	NA	NA
PB.3848.9	chr15	+	2557	8	novel_in_catalog	SLC24A5	novel	1897	9	NA	NA	-4	792	intron_retention	FALSE	canonical	1	657	junction_2	12447.68602051426	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	26	1444	10.0	-7	True	AATAAA	-21
PB.3848.2	chr15	+	4743	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	64	-2910	12	2910	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	10	1512	35.0	9	True	AATAAA	-19
PB.3848.3	chr15	+	3703	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	-19	-1787	-19	1787	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	2	NA	TRUE	NA	NA	NA	C	coding	500	1503	93	1595	40.0	-74	False	AATAAA	-15
PB.9836.11	chr6	+	1676	7	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-16	-114	intron_retention	FALSE	canonical	1	5406965	junction_5	3103220.1221113	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	627	1361	35.0	0	True	ATTAAA	-17
PB.3848.1	chr15	+	2383	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	54	-540	2	540	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	20	1522	50.0	-1	True	NA	NA
PB.3848.6	chr15	+	5170	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	26	-3299	-6	3299	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	3	NA	TRUE	NA	NA	NA	C	coding	500	1503	48	1550	25.0	8	True	AATAAA	-19
PB.3848.7	chr15	+	1890	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	33	-26	1	26	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	41	1543	25.0	15	True	ATTAAA	-27
PB.3848.4	chr15	+	1571	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	9	317	9	-40	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	65	1567	40.0	-46	False	AATAAA	-26
PB.3848.5	chr15	+	2636	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	57	-796	5	796	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	17	1519	10.0	2	True	AATAAA	-25
PB.11551.3	chr9	+	3122	3	full-splice_match	ALDH1B1	ENST00000635162.1	584	3	-12	-2526	-12	3	multi-exon	FALSE	canonical	1	6068	junction_2	1514.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	36	1760	15.0	-65	True	AATAAA	-25
PB.277.17	chr1	-	2343	10	full-splice_match	SFPQ	ENST00000357214.5	3747	10	213	1191	213	-1191	multi-exon	FALSE	canonical	1	1297136	junction_9	1381324.230798471	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	25	2010	30.0	209	False	AATAAA	-15
PB.2688.2	chr12	-	1076	8	full-splice_match	NACA	ENST00000393891.8	1059	8	-11	-6	7	-1	multi-exon	FALSE	canonical	1	833083	junction_7	3472867.94670834	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	320	967	10.0	252	False	AATAAA	-26
PB.2688.1	chr12	-	837	8	full-splice_match	NACA	ENST00000356769.7	2690	8	1858	-5	15	0	multi-exon	FALSE	canonical	1	3162272	junction_7	2982186.0432399013	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	80	727	10.0	-5	True	AATAAA	-27
PB.5683.1	chr19	-	3284	9	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	-5	42	combination_of_known_junctions	FALSE	canonical	1	25044	junction_6	81675.31538420513	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	578	2428	25.0	-11	False	NA	NA
PB.10097.10	chr6	+	2204	20	novel_not_in_catalog	ORC3	novel	2470	19	NA	NA	-1	8505	any annotated donor/acceptor	FALSE	canonical	1	336	junction_19	81606.9179869213	NA	6	2	TRUE	NA	NA	NA	C	coding	677	2034	51	2084	35.0	-1	True	AATAAA	-17
PB.5683.3	chr19	-	3543	11	full-splice_match	ZNF266	ENST00000592904.6	3509	11	0	-34	0	34	multi-exon	FALSE	canonical	1	46577	junction_6	77393.46042043863	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	845	2695	15.0	2	True	NA	NA
PB.5683.2	chr19	-	3195	8	novel_not_in_catalog	ZNF266	novel	3509	11	NA	NA	1	35	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	105284.04056607235	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	502	2346	20.0	3	True	NA	NA
PB.5683.5	chr19	-	3098	9	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	25044	junction_6	81675.31538420513	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	568	2418	15.0	-1	True	NA	NA
PB.5683.4	chr19	-	3192	10	novel_not_in_catalog	ZNF266	novel	3509	11	NA	NA	12	3	any annotated donor/acceptor	FALSE	canonical	1	739	junction_7	98982.528725472	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	863	2512	15.0	14	True	NA	NA
PB.5683.7	chr19	-	3513	12	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	11727	junction_5	87051.73456244613	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	1185	2834	20.0	-7	True	NA	NA
PB.5683.6	chr19	-	3552	9	full-splice_match	ZNF266	ENST00000588221.5	3503	9	-47	-2	-3	2	multi-exon	FALSE	canonical	1	25044	junction_6	88191.72504469665	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	1224	2873	20.0	-1	True	NA	NA
PB.5683.9	chr19	-	3255	10	novel_in_catalog	ZNF266	novel	3509	11	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	10386	junction_6	81730.93733724514	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	726	2576	20.0	2	True	NA	NA
PB.5683.8	chr19	-	3410	11	full-splice_match	ZNF266	ENST00000592904.6	3509	11	-36	135	-28	2	multi-exon	FALSE	canonical	1	46577	junction_6	77393.46042043863	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	881	2731	20.0	-34	False	NA	NA
PB.10079.4	chr6	-	5113	28	novel_in_catalog	IBTK	novel	6054	29	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	4520	junction_27	87201.43361694508	NA	0	NA	TRUE	NA	NA	NA	C	coding	1227	3684	241	3924	20.0	-1	True	AATAAA	-24
PB.1051.16	chr1	+	4789	2	incomplete-splice_match	ZC3H11A	ENST00000466470.5	944	3	-22	1255	-22	-1255	3prime_fragment	FALSE	canonical	1	162866	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	1394	4333	60.0	9	True	NA	NA
PB.11551.2	chr9	+	1845	2	full-splice_match	ALDH1B1	ENST00000377698.3	3066	2	30	1191	-18	-1191	multi-exon	FALSE	canonical	1	350081	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	124	1677	30.0	-4552	False	NA	NA
PB.5792.4	chr19	-	2379	16	full-splice_match	ILVBL	ENST00000263383.7	2304	16	-73	-2	-73	-1	multi-exon	FALSE	canonical	1	197354	junction_15	104110.92014479345	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	214	2112	25.0	-92	False	AATAAA	-31
PB.1051.17	chr1	+	6039	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-22	-1	intron_retention	TRUE	canonical	1	14281	junction_2	198641.44454982076	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	1883	4315	20.0	9	True	AATAAA	-17
PB.5792.2	chr19	-	2474	16	novel_in_catalog	ILVBL	novel	4248	10	NA	NA	-4	6	combination_of_known_junctions	FALSE	canonical	1	26045	junction_15	134585.60708419836	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	302	2200	30.0	23	True	AATAAA	-38
PB.5792.3	chr19	-	2325	15	novel_in_catalog	ILVBL	novel	4248	10	NA	NA	6	6	intron_retention	FALSE	canonical	1	197354	junction_14	107753.92156649883	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	66	2051	30.0	-17	True	AATAAA	-38
PB.1051.10	chr1	+	4867	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-27	-1	no_combination_of_known_junctions	FALSE	canonical	1	3944	junction_2	199807.50319016926	NA	5	NA	TRUE	NA	NA	NA	C	coding	810	2433	714	3146	20.0	4	True	AATAAA	-14
PB.3766.3	chr15	-	4880	17	novel_not_in_catalog	RASGRP1	novel	5023	17	NA	NA	-254	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	44255.43097987911	NA	4	1	TRUE	NA	NA	NA	A	coding	648	1947	485	2431	30.0	4271	False	GATAAA	-19
PB.9315.10	chr5	+	3002	15	full-splice_match	TENT2	ENST00000453514.5	3523	15	153	368	0	14	multi-exon	FALSE	canonical	1	181099	junction_6	84288.01064647212	NA	1	1	TRUE	NA	NA	NA	C	coding	484	1455	541	1995	35.0	0	True	AATAAA	-31
PB.10063.4	chr6	-	2867	12	novel_not_in_catalog	SLC17A5	novel	3455	11	NA	NA	74	-2	any annotated donor/acceptor	FALSE	canonical	1	276	junction_1	65939.53283398083	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	196	1683	20.0	-1	True	AATAAA	-13
PB.10063.5	chr6	-	2627	11	full-splice_match	SLC17A5	ENST00000355773.5	3455	11	170	658	170	-658	multi-exon	FALSE	canonical	1	100104	junction_10	36017.64709638873	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	100	1587	90.0	6	True	NA	NA
PB.10063.6	chr6	-	2565	10	novel_in_catalog	SLC17A5	novel	3455	11	NA	NA	141	-658	no_combination_of_known_junctions	FALSE	canonical	1	2466	junction_1	68539.88487887819	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	129	1541	90.0	-23	True	NA	NA
PB.10063.7	chr6	-	2430	10	novel_in_catalog	SLC17A5	novel	3455	11	NA	NA	170	-658	no_combination_of_known_junctions	FALSE	canonical	1	3861	junction_9	66305.76419517517	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	134	1390	90.0	6	True	NA	NA
PB.10063.1	chr6	-	2760	12	novel_not_in_catalog	SLC17A5	novel	3455	11	NA	NA	163	12	any annotated donor/acceptor	FALSE	canonical	1	568	junction_1	65867.8861846177	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	107	1594	15.0	-1	True	AATAAA	-27
PB.10063.2	chr6	-	2615	12	novel_not_in_catalog	SLC17A5	novel	3455	11	NA	NA	141	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66007.28028779656	NA	1	1	TRUE	NA	NA	NA	C	coding	495	1488	129	1616	20.0	-23	True	AATAAA	-14
PB.10063.3	chr6	-	2465	12	novel_not_in_catalog	SLC17A5	novel	3455	11	NA	NA	163	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	66007.28028779656	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	107	1594	20.0	-1	True	AATAAA	-14
PB.277.18	chr1	-	2271	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	3	-1191	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	1660967.9818515347	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	448	1938	30.0	-1	True	AATAAA	-15
PB.1051.13	chr1	+	4886	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	3944	junction_2	194049.0964398214	NA	2	NA	TRUE	NA	NA	NA	C	coding	810	2433	729	3161	25.0	8	True	AATAAA	-18
PB.10063.8	chr6	-	1779	11	full-splice_match	SLC17A5	ENST00000355773.5	3455	11	164	1512	164	-1512	multi-exon	FALSE	canonical	1	100104	junction_10	36017.64709638873	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	106	1593	45.0	0	True	AATAAA	-21
PB.11427.2	chr9	+	3292	19	full-splice_match	VLDLR	ENST00000382100.7	9163	19	303	5568	37	5	multi-exon	FALSE	canonical	1	82572	junction_16	53574.04001720827	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	54	2675	5.0	10	True	ATTAAA	-19
PB.11427.1	chr9	+	3212	18	full-splice_match	VLDLR	ENST00000382099.2	3240	18	33	-5	33	5	multi-exon	FALSE	canonical	1	82941	junction_1	50094.742116407215	NA	1	NA	TRUE	NA	NA	NA	C	coding	845	2538	58	2595	5.0	6	True	ATTAAA	-19
PB.277.19	chr1	-	2097	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	4	-1191	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	1660967.9818515347	NA	4	NA	TRUE	NA	NA	NA	C	coding	496	1491	274	1764	30.0	0	True	AATAAA	-15
PB.10950.3	chr7	-	5510	19	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	0	2	intron_retention	FALSE	canonical	1	35195	junction_1	86774.95638671717	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	191	1663	30.0	-1	True	AATAAA	-24
PB.896.3	chr1	-	2265	10	novel_in_catalog	ALDH9A1	novel	2696	11	NA	NA	-46	-8	no_combination_of_known_junctions	FALSE	canonical	1	2139	junction_9	313538.67536309524	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	234	1439	15.0	-5	True	AATAAA	-10
PB.10950.2	chr7	-	4804	20	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	12	9	combination_of_known_junctions	FALSE	canonical	1	22797	junction_1	100887.22102440774	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	204	1676	35.0	7	True	AATAAA	-31
PB.5958.1	chr19	+	1724	7	full-splice_match	ZNF568	ENST00000333987.11	2441	7	-17	734	-5	-582	multi-exon	FALSE	canonical	1	31969	junction_2	17155.57146057481	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1200	524	1723	35.0	-8	True	AATAAA	-20
PB.9570.14	chr5	-	2688	17	full-splice_match	TNIP1	ENST00000520931.5	2680	17	-10	2	8	0	multi-exon	FALSE	canonical	1	97232	junction_16	492546.23402897024	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	171	1922	30.0	-21	True	CATAAA	-19
PB.1051.18	chr1	+	5172	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-22	0	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_3	189230.0938858267	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	1015	3447	25.0	9	True	AATAAA	-18
PB.8733.2	chr4	+	5040	7	novel_not_in_catalog	KLF3	novel	5122	6	NA	NA	-173	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	120784.2074092148	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	227	1264	35.0	-3532	False	AATAAA	-15
PB.4395.2	chr16	-	2447	1	full-splice_match	AC026471.1	ENST00000564629.1	3026	1	361	218	361	-218	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	140	423	3	425	5.0	-48	True	NA	NA
PB.4395.1	chr16	-	2650	1	full-splice_match	AC026471.1	ENST00000564629.1	3026	1	356	20	356	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	142	429	2	430	35.0	-53	True	NA	NA
PB.11437.1	chr9	+	1690	3	full-splice_match	RCL1	ENST00000381732.3	804	3	-58	-828	49	828	multi-exon	FALSE	canonical	1	206235	junction_1	21455.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	175	702	100.0	-26	True	NA	NA
PB.11437.2	chr9	+	1430	9	full-splice_match	RCL1	ENST00000381750.8	2134	9	75	629	-32	-37	multi-exon	TRUE	canonical	1	206235	junction_1	39763.858693385126	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	149	1270	15.0	0	True	AATAAA	-15
PB.975.4	chr1	-	2583	7	full-splice_match	GLUL	ENST00000331872.10	4364	7	415	1366	1	-176	multi-exon	FALSE	canonical	1	1720479	junction_6	1486407.6785337192	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	127	1248	20.0	-2	True	AATAAA	-19
PB.11437.4	chr9	+	2060	9	full-splice_match	RCL1	ENST00000381750.8	2134	9	75	-1	-32	1	multi-exon	FALSE	canonical	1	206235	junction_1	39763.858693385126	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	149	1270	40.0	0	True	ATTAAA	-16
PB.9570.18	chr5	-	2608	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	18660	junction_2	570659.351275443	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	124	1842	30.0	-12	True	CATAAA	-19
PB.11475.6	chr9	-	2833	1	novel_in_catalog	RPS6	novel	1387	6	NA	NA	-4	-1123	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	116	351	1311	1661	85.0	-5	True	NA	NA
PB.709.1	chr1	+	2075	1	full-splice_match	HIST2H4A	ENST00000578186.2	583	1	-4	-1488	-4	98	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	103	312	31	342	15.0	-2	True	AATAGA	-14
PB.709.2	chr1	-	1971	1	full-splice_match	HIST2H4B	ENST00000579512.2	1132	1	51	-890	-11	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	103	312	29	340	30.0	NA	False	AATAAA	-16
PB.1565.24	chr10	-	3169	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	45893	junction_15	103313.0706431024	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	204	2087	70.0	-3	True	NA	NA
PB.10073.1	chr6	-	4573	8	full-splice_match	LCA5	ENST00000369846.8	4542	8	-26	-5	-4	5	multi-exon	FALSE	canonical	1	14292	junction_7	9054.956266023146	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	462	2555	30.0	-5	True	AATAAA	-19
PB.1565.21	chr10	-	4358	17	full-splice_match	PIK3AP1	ENST00000339364.9	4803	17	-10	455	-10	-455	multi-exon	FALSE	canonical	1	67077	junction_16	104349.95120025736	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	131	2548	30.0	-11	True	AATACA	-19
PB.1565.23	chr10	-	3640	17	full-splice_match	PIK3AP1	ENST00000339364.9	4803	17	-20	1183	-20	0	multi-exon	FALSE	canonical	1	67077	junction_16	104349.95120025736	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	141	2558	70.0	96	False	NA	NA
PB.1565.22	chr10	-	3771	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	35	-523	combination_of_known_junctions	FALSE	canonical	1	45893	junction_15	103313.0706431024	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	146	2029	30.0	-1	True	NA	NA
PB.10089.1	chr6	+	1530	1	novel_in_catalog	NT5E	novel	3918	8	NA	NA	100	-20386	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	126	381	457	837	75.0	-48	True	AATATA	-6
PB.10089.2	chr6	+	3568	9	full-splice_match	NT5E	ENST00000257770.7	3548	9	-13	-7	-13	-6	multi-exon	FALSE	canonical	1	445422	junction_1	73875.10383241434	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	63	1787	15.0	-5	True	AATAAA	-17
PB.10089.3	chr6	+	2761	1	novel_in_catalog	NT5E	novel	3918	8	NA	NA	100	-19155	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	126	381	457	837	15.0	-48	True	AGTAAA	-12
PB.3901.21	chr15	-	4403	15	novel_not_in_catalog	MYO1E	novel	8673	28	NA	NA	1	3279	any annotated donor/acceptor	FALSE	canonical	1	98	junction_1	90100.03603444432	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	371	2071	35.0	0	True	AATAAA	-20
PB.3901.20	chr15	-	2724	18	incomplete-splice_match	MYO1E	ENST00000288235.8	8673	28	29	55235	0	7828	3prime_fragment	FALSE	canonical	1	252081	junction_17	66708.54588919264	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	372	2279	25.0	-1	True	NA	NA
PB.9018.3	chr4	+	4855	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	-10	-667	-10	667	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	4	NA	TRUE	NA	NA	NA	C	coding	438	1317	585	1901	75.0	-24	True	NA	NA
PB.9018.2	chr4	+	3586	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	-16	608	-16	-608	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	591	1907	70.0	-30	True	NA	NA
PB.10194.1	chr6	-	4397	10	full-splice_match	SERINC1	ENST00000339697.4	3137	10	-17	-1243	-17	1243	multi-exon	FALSE	canonical	1	1364046	junction_9	123703.56444109482	NA	9	1	TRUE	NA	NA	NA	C	coding	393	1182	283	1464	10.0	-1	True	NA	NA
PB.730.3	chr1	-	3321	9	novel_not_in_catalog	CTSS	novel	4107	8	NA	NA	-5	9	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	566330.3909064478	NA	1	1	TRUE	NA	NA	NA	C	coding	331	996	102	1097	25.0	-6	True	NA	NA
PB.9018.7	chr4	+	3322	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	2	854	-1	-854	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	573	1889	50.0	-12	True	NA	NA
PB.9018.6	chr4	+	2825	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	1	1352	1	841	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	574	1890	25.0	-13	True	ATTAAA	-15
PB.10194.5	chr6	-	2896	8	novel_in_catalog	SERINC1	novel	3137	10	NA	NA	-20	0	no_combination_of_known_junctions	FALSE	canonical	1	15080	junction_3	533811.9097940007	NA	2	NA	TRUE	NA	NA	NA	C	coding	306	921	286	1206	30.0	-4	True	AATAAA	-12
PB.10194.4	chr6	-	3136	10	novel_not_in_catalog	SERINC1	novel	3137	10	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	493603.2323023057	NA	29	1	TRUE	NA	NA	NA	C	coding	232	699	263	961	30.0	-13	True	AATAAA	-12
PB.6941.5	chr2	-	3973	11	novel_in_catalog	FAM126B	novel	9333	12	NA	NA	-17	-570	no_combination_of_known_junctions	FALSE	canonical	1	1939	junction_10	31130.06157334097	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	174	1766	85.0	72	False	NA	NA
PB.6941.4	chr2	-	3990	12	full-splice_match	FAM126B	ENST00000418596.7	9333	12	-2	5345	0	-570	multi-exon	FALSE	canonical	1	41034	junction_11	22325.373678862048	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	191	1783	85.0	-3	True	NA	NA
PB.9018.9	chr4	+	2710	10	novel_not_in_catalog	TMEM184C	novel	4178	10	NA	NA	3	701	any annotated donor/acceptor	FALSE	canonical	1	7243	junction_7	88363.42100428347	NA	4	NA	TRUE	NA	NA	NA	C	coding	138	417	1499	1915	20.0	-8	True	AATAAA	-26
PB.8689.11	chr4	+	5163	14	novel_in_catalog	TBC1D14	novel	663	2	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	2019	junction_1	135939.743751875	NA	9	NA	TRUE	NA	NA	NA	C	coding	693	2082	361	2442	20.0	-8270	False	AATAAA	-19
PB.6941.1	chr2	-	4105	12	novel_in_catalog	FAM126B	novel	9333	12	NA	NA	-2	-570	no_combination_of_known_junctions	FALSE	canonical	1	11701	junction_11	27731.558843388113	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	306	1898	85.0	38	True	NA	NA
PB.6941.3	chr2	-	4087	13	novel_in_catalog	FAM126B	novel	9333	12	NA	NA	0	-570	combination_of_known_junctions	FALSE	canonical	1	1259	junction_12	34782.679746594666	NA	8	NA	TRUE	NA	NA	NA	C	coding	530	1593	288	1880	85.0	-3	True	NA	NA
PB.6941.2	chr2	-	4091	13	novel_in_catalog	FAM126B	novel	9333	12	NA	NA	19	-570	no_combination_of_known_junctions	FALSE	canonical	1	11701	junction_12	33958.86606862288	NA	8	1	TRUE	NA	NA	NA	C	coding	448	1347	538	1884	85.0	108	False	NA	NA
PB.615.6	chr1	+	2765	5	incomplete-splice_match	DDX20	ENST00000369702.4	4212	11	614	5232	614	296	intron_retention	FALSE	canonical	1	134634	junction_1	31173.879124797735	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	7	846	80.0	16	True	NA	NA
PB.615.4	chr1	+	1437	11	full-splice_match	DDX20	ENST00000369702.4	4212	11	598	2177	598	9	multi-exon	FALSE	canonical	1	134634	junction_1	45354.653860546656	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1413	23	1435	70.0	0	True	NA	NA
PB.615.5	chr1	+	4404	7	novel_in_catalog	DDX20	novel	1499	11	NA	NA	599	-314	intron_retention	FALSE	canonical	1	134634	junction_1	56717.15360746988	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	2637	4043	25.0	1	True	AATAAA	-19
PB.8733.1	chr4	+	5083	6	full-splice_match	KLF3	ENST00000261438.9	5122	6	37	2	36	-2	multi-exon	FALSE	canonical	1	164290	junction_1	88321.4765691788	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	269	1306	30.0	1	True	AATAAA	-16
PB.11197.1	chr8	+	2861	1	novel_in_catalog	PKIA	novel	4163	4	NA	NA	-36	-82919	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-21	True	NA	NA
PB.615.2	chr1	+	3174	11	full-splice_match	DDX20	ENST00000369702.4	4212	11	598	440	598	2	multi-exon	FALSE	canonical	1	134634	junction_1	45354.653860546656	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	23	2497	10.0	0	True	ATTAAA	-16
PB.615.3	chr1	+	1582	11	full-splice_match	DDX20	ENST00000369702.4	4212	11	561	2069	561	117	multi-exon	FALSE	canonical	1	134634	junction_1	45354.653860546656	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1521	60	1580	75.0	-97	False	NA	NA
PB.2222.3	chr11	-	2282	6	full-splice_match	TAF1D	ENST00000448108.6	2082	6	423	-623	-27	623	multi-exon	FALSE	canonical	1	679532	junction_5	158151.102196096	NA	3	NA	TRUE	NA	NA	NA	C	coding	278	837	229	1065	55.0	-29	False	NA	NA
PB.2222.2	chr11	-	3560	11	novel_in_catalog	TAF1D	novel	2540	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	288742	junction_3	279960.5850451809	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	202	840	35.0	-2	True	ATTAAA	-13
PB.2222.1	chr11	-	1557	14	novel_in_catalog	TAF1D	novel	2540	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	288742	junction_3	263067.4233730398	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	218	1054	35.0	-18	False	ATTAAA	-14
PB.8051.6	chr3	+	4255	6	novel_in_catalog	ABHD5	novel	2225	8	NA	NA	1	1	intron_retention	FALSE	canonical	1	212662	junction_1	67287.18455991453	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	3039	3989	45.0	1	True	AATAAA	-18
PB.8051.1	chr3	+	4188	7	full-splice_match	ABHD5	ENST00000644371.1	5366	7	16	1162	-6	752	multi-exon	FALSE	canonical	1	201999	junction_2	73171.42568140927	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	108	1157	100.0	-20	True	NA	NA
PB.6791.1	chr2	-	4037	8	full-splice_match	CYTIP	ENST00000264192.7	2260	8	53	-1830	-3	1830	multi-exon	FALSE	canonical	1	525444	junction_7	75255.35095897954	NA	10	NA	TRUE	NA	NA	NA	C	coding	359	1080	70	1149	10.0	-1	True	AATAAA	-18
PB.8051.3	chr3	+	2379	7	full-splice_match	ABHD5	ENST00000644371.1	5366	7	26	2961	3	-62	multi-exon	FALSE	canonical	1	201999	junction_2	73171.42568140927	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	98	1147	75.0	-10	True	NA	NA
PB.2222.4	chr11	-	1266	6	full-splice_match	TAF1D	ENST00000448108.6	2082	6	453	363	1	-15	multi-exon	FALSE	canonical	1	679532	junction_5	158151.102196096	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	199	1035	30.0	1	True	ATTAAA	-25
PB.717.11	chr1	+	2540	16	novel_in_catalog	VPS45	novel	2315	15	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	1	4012	junction_14	126561.2059987841	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	72	1583	40.0	0	True	AATAAA	-14
PB.615.1	chr1	+	2867	11	full-splice_match	DDX20	ENST00000369702.4	4212	11	596	749	596	-307	multi-exon	FALSE	canonical	1	134634	junction_1	45354.653860546656	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	25	2499	15.0	-2	True	AATAAA	-26
PB.6791.8	chr2	-	1450	8	full-splice_match	CYTIP	ENST00000264192.7	2260	8	115	695	59	-695	multi-exon	FALSE	canonical	1	525444	junction_7	75255.35095897954	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	8	1087	30.0	-1	True	AATAAA	-15
PB.9832.14	chr6	+	2548	7	novel_not_in_catalog	HLA-F	novel	1544	8	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	15807	junction_5	654246.7582348464	NA	5	1	TRUE	NA	NA	NA	C	coding	424	1275	31	1305	20.0	0	True	AATAAA	-18
PB.11212.1	chr8	-	3245	8	full-splice_match	SNX16	ENST00000345957.8	1853	8	-19	-1373	-19	2	multi-exon	FALSE	canonical	1	45991	junction_7	24482.330820576768	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	299	1333	25.0	283	False	AATAAA	-16
PB.1051.69	chr1	+	2110	2	incomplete-splice_match	ZC3H11A	ENST00000640465.1	4365	17	36094	-6	825	0	5prime_fragment	FALSE	canonical	1	119046	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-18
PB.8921.1	chr4	+	4397	5	full-splice_match	CYP2U1	ENST00000332884.10	4944	5	550	-3	323	3	multi-exon	FALSE	canonical	1	49286	junction_1	17027.230490819697	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	353	1360	25.0	370	False	ATTAAA	-13
PB.12155.21	chrX	-	2125	10	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	279566.50501980324	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	26	934	90.0	-5	True	NA	NA
PB.478.9	chr1	-	2489	6	incomplete-splice_match	CRYZ	ENST00000370871.7	1292	8	-10	2357	-2	-1224	3prime_fragment	FALSE	canonical	1	392025	junction_5	80122.37596477028	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	91	843	85.0	15	True	AATAAA	-8
PB.478.8	chr1	-	1793	8	full-splice_match	CRYZ	ENST00000370871.7	1292	8	-25	-476	14	-6	multi-exon	FALSE	canonical	1	80925	junction_2	195172.86635969978	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	106	993	40.0	0	True	AATAAA	-9
PB.478.7	chr1	-	4801	8	novel_in_catalog	CRYZ	novel	1592	7	NA	NA	1	-6	intron_retention	FALSE	canonical	1	392025	junction_7	110420.51423498428	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	119	871	40.0	-13	True	AATAAA	-9
PB.478.6	chr1	-	1851	9	novel_in_catalog	CRYZ	novel	1592	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	73086	junction_7	255636.46545213257	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	158	1045	25.0	-13	True	AATAAA	-15
PB.478.5	chr1	-	1780	9	novel_in_catalog	CRYZ	novel	1592	7	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	12124	junction_5	272918.33834912966	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	395	973	20.0	-3	True	AATAAA	-16
PB.12155.20	chrX	-	2198	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	34	1041	90.0	-13	True	NA	NA
PB.4196.3	chr16	-	2923	1	novel_in_catalog	MMP25-AS1	novel	779	4	NA	NA	23	721	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-33	True	NA	NA
PB.4196.2	chr16	-	2440	4	full-splice_match	MMP25-AS1	ENST00000572574.5	794	4	-27	-1619	-27	212	multi-exon	FALSE	canonical	1	13619	junction_2	26619.460938694207	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	9909	False	NA	NA
PB.4196.1	chr16	-	2285	3	incomplete-splice_match	MMP25-AS1	ENST00000576250.5	779	4	-29	1364	-22	225	3prime_fragment	FALSE	canonical	1	6921	junction_2	34474.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	9914	False	NA	NA
PB.5122.10	chr17	+	2301	17	novel_not_in_catalog	TOM1L1	novel	2442	11	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	1177	junction_14	143411.31576004505	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	32	1486	45.0	-18	True	AATAAA	-9
PB.10449.30	chr7	-	1917	13	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	78658	junction_3	5763330.754746532	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	173	1198	30.0	-4	True	AATAAA	-15
PB.8525.1	chr3	-	3213	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	5127	any annotated donor/acceptor	FALSE	canonical	1	3037	junction_1	23549.376019098447	NA	1	NA	TRUE	NA	NA	NA	B	coding	176	531	409	939	20.0	-1	True	AATAAA	-12
PB.8525.3	chr3	-	2695	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3093	4615	any annotated donor/acceptor	FALSE	canonical	1	3037	junction_1	23549.376019098447	NA	2	NA	TRUE	NA	NA	NA	B	coding	176	531	403	933	25.0	5	True	NA	NA
PB.8525.2	chr3	-	3109	5	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	5127	any annotated donor/acceptor	FALSE	canonical	1	860	junction_1	23557.648641152624	NA	1	NA	TRUE	NA	NA	NA	B	coding	172	519	317	835	20.0	-1	True	AATAAA	-12
PB.8525.5	chr3	-	2928	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	1756	any annotated donor/acceptor	FALSE	canonical	1	19907	junction_1	18331.574636857215	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-25
PB.8689.14	chr4	+	3850	9	novel_in_catalog	TBC1D14	novel	4887	14	NA	NA	50	-1	no_combination_of_known_junctions	FALSE	canonical	1	19627	junction_5	178482.83007739848	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	695	1129	20.0	-20	True	AATAAA	-19
PB.6476.38	chr2	-	2484	15	incomplete-splice_match	PPP4R3B	ENST00000616407.1	4385	17	-20	16033	0	3617	3prime_fragment	FALSE	canonical	1	146496	junction_6	101224.03065460437	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2160	324	2483	60.0	-5	True	AAGAAA	-19
PB.8525.6	chr3	-	2572	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	1400	any annotated donor/acceptor	FALSE	canonical	1	19907	junction_1	18331.574636857215	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.8525.9	chr3	-	2131	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	959	any annotated donor/acceptor	FALSE	canonical	1	19907	junction_1	18331.574636857215	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-20
PB.8525.8	chr3	-	2406	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3099	1234	any annotated donor/acceptor	FALSE	canonical	1	19907	junction_1	18331.574636857215	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.896.5	chr1	-	2048	11	novel_not_in_catalog	ALDH9A1	novel	2696	11	NA	NA	-75	189	any annotated donor/acceptor	FALSE	canonical	1	1683	junction_10	300541.950613238	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	130	1584	85.0	-34	False	NA	NA
PB.917.1	chr1	-	1744	1	full-splice_match	ANKRD36BP1	ENST00000358576.4	1779	1	17	18	17	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	119	360	282	641	90.0	-822	False	NA	NA
PB.787.21	chr1	-	5078	11	novel_in_catalog	PYGO2	novel	594	3	NA	NA	-6882	-2662	intron_retention	FALSE	canonical	1	580770	junction_2	350097.7152441301	NA	2	NA	TRUE	NA	NA	NA	C	coding	599	1800	210	2009	15.0	3711	False	ATTAAA	-15
PB.10864.9	chr7	-	3509	15	full-splice_match	WDR91	ENST00000354475.4	4588	15	8	1071	8	872	multi-exon	FALSE	canonical	1	108881	junction_10	40237.88265802539	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	25	2268	65.0	-9	True	NA	NA
PB.10864.7	chr7	-	2887	4	novel_not_in_catalog	WDR91	novel	4500	15	NA	NA	4833	0	any annotated donor/acceptor	FALSE	canonical	1	502	junction_3	104177.03340308106	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	102	575	15.0	1	True	AATAAA	-16
PB.8158.3	chr3	-	1775	10	full-splice_match	POC1A	ENST00000394970.6	1999	10	261	-37	-17	4	multi-exon	FALSE	canonical	1	59737	junction_1	48140.021086640816	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	58	1137	15.0	-36	True	ATTAAA	-20
PB.8158.2	chr3	-	1913	11	full-splice_match	POC1A	ENST00000296484.6	1898	11	-10	-5	-10	5	multi-exon	FALSE	canonical	1	84762	junction_10	35555.57119552434	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	51	1274	15.0	-29	True	ATTAAA	-21
PB.10864.3	chr7	-	4658	15	novel_in_catalog	WDR91	novel	4500	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	11660	junction_5	58018.47804266979	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	25	2346	15.0	-9	True	AATAAA	-16
PB.10864.1	chr7	-	4575	15	full-splice_match	WDR91	ENST00000354475.4	4588	15	14	-1	14	1	multi-exon	FALSE	canonical	1	108881	junction_10	40237.88265802539	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	19	2262	15.0	-3	True	AATAAA	-17
PB.9728.11	chr6	-	4857	1	novel_in_catalog	TFAP2A	novel	3829	7	NA	NA	14	-725	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	111	336	804	1139	95.0	13	True	NA	NA
PB.9728.10	chr6	-	1770	7	full-splice_match	TFAP2A	ENST00000379613.8	3331	7	180	1381	-82	-45	multi-exon	FALSE	canonical	1	96577	junction_6	54776.53779498623	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	98	1411	70.0	-12	True	NA	NA
PB.4480.9	chr16	+	2859	5	novel_not_in_catalog	CBFB	novel	584	6	NA	NA	-4	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	305875.6673805551	NA	10	2	TRUE	NA	NA	NA	C	coding	116	351	234	584	30.0	26	True	AATAAA	-13
PB.4480.8	chr16	+	2959	6	full-splice_match	CBFB	ENST00000412916.6	2971	6	43	-31	43	-5	multi-exon	FALSE	canonical	1	294417	junction_5	164157.93748022057	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	121	684	30.0	-677	False	AATAAA	-13
PB.10025.8	chr6	-	2805	14	novel_not_in_catalog	MUT	novel	3749	13	NA	NA	-66	-1021	any annotated donor/acceptor	FALSE	canonical	1	9231	junction_3	129481.40376035271	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	130	2172	45.0	-5	True	ATTAAA	-8
PB.11929.8	chr9	-	2434	11	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	-10	0	intron_retention	FALSE	canonical	1	3514	junction_10	122298.9689891538	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	1274	2104	55.0	-19	True	ATTAAA	-13
PB.4480.3	chr16	+	3017	5	novel_in_catalog	CBFB	novel	584	6	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	26586	junction_2	260390.25706751682	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	265	696	30.0	-5	True	AATAAA	-13
PB.4480.2	chr16	+	2804	6	novel_in_catalog	CBFB	novel	584	6	NA	NA	-10	-6	combination_of_known_junctions	FALSE	canonical	1	3638	junction_1	256145.59044605863	NA	7	NA	TRUE	NA	NA	NA	C	coding	87	264	267	530	30.0	-2	True	AATAAA	-12
PB.4480.1	chr16	+	2842	6	full-splice_match	CBFB	ENST00000561924.6	584	6	-16	-2242	-16	-5	multi-exon	FALSE	canonical	1	3638	junction_1	249763.26538576483	NA	2	NA	TRUE	NA	NA	NA	C	coding	82	249	273	521	30.0	-8	True	AATAAA	-13
PB.10025.9	chr6	-	2592	13	full-splice_match	MUT	ENST00000274813.3	3749	13	-26	1183	-26	-1183	multi-exon	FALSE	canonical	1	162846	junction_12	65091.93193732487	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	155	2407	75.0	35	True	NA	NA
PB.4480.7	chr16	+	2952	6	full-splice_match	CBFB	ENST00000290858.10	3136	6	179	5	81	-5	multi-exon	FALSE	canonical	1	391065	junction_1	139337.87217781102	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	83	631	30.0	-1	True	AATAAA	-13
PB.4480.6	chr16	+	2447	6	full-splice_match	CBFB	ENST00000290858.10	3136	6	19	670	-13	-634	multi-exon	FALSE	canonical	1	391065	junction_1	139337.87217781102	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	243	791	40.0	17	True	AATAAA	-20
PB.4480.5	chr16	+	1901	6	full-splice_match	CBFB	ENST00000290858.10	3136	6	6	1229	6	386	multi-exon	FALSE	canonical	1	391065	junction_1	139337.87217781102	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	256	804	15.0	4	True	ATTAAA	-15
PB.4480.4	chr16	+	2188	6	full-splice_match	CBFB	ENST00000412916.6	2971	6	148	635	-68	-635	multi-exon	FALSE	canonical	1	294417	junction_5	164157.93748022057	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	16	579	40.0	-572	False	AATAAA	-19
PB.7111.6	chr2	-	5068	28	novel_not_in_catalog	HDLBP	novel	6372	28	NA	NA	-26	-26	any annotated donor/acceptor	FALSE	canonical	1	46958	junction_1	968238.573402307	NA	1	NA	TRUE	NA	NA	NA	C	coding	1250	3753	231	3983	20.0	-5	True	AATAAA	-12
PB.787.26	chr1	-	2442	12	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-6892	-3721	any annotated donor/acceptor	FALSE	canonical	1	18156	junction_5	514155.06765359006	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	220	1998	25.0	1	True	TTTAAA	-20
PB.7878.3	chr22	+	2389	9	novel_in_catalog	TRABD	novel	2272	10	NA	NA	-7	0	intron_retention	TRUE	canonical	1	237456	junction_1	217378.22088988122	NA	2	1	TRUE	NA	NA	NA	C	coding	292	879	104	982	5.0	-14	True	AATAAA	-16
PB.12153.1	chrX	+	1902	1	antisense	novelGene_ATRX_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7111.3	chr2	-	6313	28	full-splice_match	HDLBP	ENST00000391976.6	4489	28	96	-1920	7	-25	multi-exon	FALSE	canonical	1	286089	junction_27	801162.4517176107	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	198	4004	25.0	28	True	AATAAA	-13
PB.7878.2	chr22	+	1452	10	full-splice_match	TRABD	ENST00000303434.8	2329	10	-9	886	-7	1	multi-exon	FALSE	canonical	1	88162	junction_1	252302.94122466605	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	129	1259	10.0	-14	True	AATAAA	-21
PB.10025.2	chr6	-	3863	13	full-splice_match	MUT	ENST00000274813.3	3749	13	-115	1	-115	-1	multi-exon	FALSE	canonical	1	162846	junction_12	65091.93193732487	NA	2	NA	TRUE	NA	NA	NA	C	coding	750	2253	244	2496	25.0	-3	True	AATAAA	-19
PB.7111.2	chr2	-	5018	28	novel_not_in_catalog	HDLBP	novel	6372	28	NA	NA	0	-19	any annotated donor/acceptor	FALSE	canonical	1	46958	junction_1	943990.8926748509	NA	6	1	TRUE	NA	NA	NA	C	coding	1250	3753	174	3926	15.0	2	True	AATAAA	-19
PB.7878.1	chr22	+	2343	10	full-splice_match	TRABD	ENST00000303434.8	2329	10	-17	3	-15	0	multi-exon	FALSE	canonical	1	88162	junction_1	252302.94122466605	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	137	1267	5.0	-22	True	AATAAA	-16
PB.10025.3	chr6	-	3329	13	full-splice_match	MUT	ENST00000274813.3	3749	13	11	409	11	-409	multi-exon	FALSE	canonical	1	162846	junction_12	65091.93193732487	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	118	2370	70.0	72	True	NA	NA
PB.8868.1	chr4	-	5561	10	full-splice_match	KLHL8	ENST00000273963.9	5621	10	57	3	-6	-3	multi-exon	FALSE	canonical	1	59622	junction_7	37186.902072877456	NA	2	NA	TRUE	NA	NA	NA	C	coding	620	1863	286	2148	35.0	-16	True	ATTAAA	-26
PB.4647.19	chr17	-	4151	32	novel_not_in_catalog	MYO1C	novel	4724	32	NA	NA	-166	9	any annotated donor/acceptor	FALSE	canonical	1	2735	junction_31	249526.5628967705	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	172	3258	85.0	7152	False	NA	NA
PB.8868.3	chr4	-	5124	10	full-splice_match	KLHL8	ENST00000273963.9	5621	10	27	470	27	-324	multi-exon	FALSE	canonical	1	59622	junction_7	37186.902072877456	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	316	2178	30.0	36	False	AATAAA	-16
PB.7265.25	chr20	-	3025	19	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	5857	junction_6	502469.40703777067	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	879	1604	25.0	-2	True	AATAAA	-16
PB.12222.1	chrX	-	2295	13	novel_not_in_catalog	CHRDL1	novel	3860	12	NA	NA	-14	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	51434.83935335616	NA	3	2	TRUE	NA	NA	NA	B	coding	451	1356	143	1498	35.0	-17	True	AATAAA	-14
PB.8868.4	chr4	-	4991	10	full-splice_match	KLHL8	ENST00000273963.9	5621	10	-3	633	-3	307	multi-exon	FALSE	canonical	1	59622	junction_7	37186.902072877456	NA	2	NA	TRUE	NA	NA	NA	C	coding	620	1863	346	2208	10.0	6	True	AATAAA	-45
PB.8868.7	chr4	-	3671	10	full-splice_match	KLHL8	ENST00000273963.9	5621	10	62	1888	-1	453	multi-exon	FALSE	canonical	1	59622	junction_7	37186.902072877456	NA	1	NA	TRUE	NA	NA	NA	C	coding	620	1863	281	2143	65.0	-11	True	ATTAAA	-43
PB.12222.2	chrX	-	1787	11	novel_not_in_catalog	CHRDL1	novel	3860	12	NA	NA	4	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	48511.1789719648	NA	1	1	TRUE	NA	NA	NA	B	coding	385	1158	125	1282	35.0	1	True	AATAAA	-14
PB.8531.2	chr3	+	2674	7	full-splice_match	ZNF639	ENST00000491818.5	1228	7	-17	-1429	-17	428	multi-exon	FALSE	canonical	1	63622	junction_1	126455.59043087902	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	597	2054	30.0	28	True	AATAAA	-21
PB.7878.7	chr22	+	2319	10	novel_not_in_catalog	TRABD	novel	2272	10	NA	NA	7	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	297460.4080433787	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	87	965	20.0	3	True	AATAAA	-13
PB.8531.1	chr3	+	2272	7	full-splice_match	ZNF639	ENST00000491818.5	1228	7	-45	-999	40	0	multi-exon	TRUE	canonical	1	63622	junction_1	126455.59043087902	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	625	2082	25.0	0	True	TATAAA	-24
PB.4647.14	chr17	-	5420	42	novel_in_catalog	MYO1C	novel	4724	32	NA	NA	-23805	11	no_combination_of_known_junctions	FALSE	canonical	1	1491	junction_31	332584.84990370943	NA	0	NA	TRUE	NA	NA	NA	C	coding	1468	4407	119	4525	85.0	-6	True	NA	NA
PB.993.3	chr1	+	3089	5	novel_not_in_catalog	SWT1	novel	3001	19	NA	NA	35	-2090	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	18875.902910523248	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2	True	NA	NA
PB.7878.6	chr22	+	2639	8	novel_in_catalog	TRABD	novel	2272	10	NA	NA	4	2	intron_retention	FALSE	canonical	1	88162	junction_1	268846.52835020795	NA	1	1	TRUE	NA	NA	NA	C	coding	224	675	115	789	20.0	0	True	AATAAA	-21
PB.12363.1	chrX	+	1988	5	full-splice_match	FUNDC2	ENST00000369498.7	6455	5	357	4110	-111	622	multi-exon	FALSE	canonical	1	107580	junction_4	44647.89542842417	NA	0	NA	TRUE	NA	NA	NA	A	coding	151	456	12	467	25.0	125	False	NA	NA
PB.7265.20	chr20	-	2726	16	full-splice_match	RBM39	ENST00000528062.7	2421	16	-18	-287	0	0	multi-exon	FALSE	canonical	1	93647	junction_12	466662.38592595677	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	330	1856	25.0	3	True	AATAAA	-17
PB.7878.4	chr22	+	2297	10	full-splice_match	TRABD	ENST00000380909.8	2272	10	3	-28	0	-3	multi-exon	FALSE	canonical	1	237456	junction_1	217804.62883618692	NA	2	1	TRUE	NA	NA	NA	C	coding	376	1131	94	1224	20.0	-4	True	AATAAA	-13
PB.4029.1	chr15	+	1950	2	intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	362	1089	207	1295	30.0	0	True	ATTAAA	-29
PB.4029.2	chr15	+	2391	1	full-splice_match	TLNRD1	ENST00000267984.3	4845	1	669	1785	669	-1785	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	362	1089	660	1748	20.0	-5579	False	ATTAAA	-17
PB.543.12	chr1	-	1163	4	full-splice_match	TMED5	ENST00000370282.7	6104	4	337	4604	-30	-114	multi-exon	FALSE	canonical	1	481907	junction_3	127315.80578493256	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	150	839	30.0	21	True	AATAAA	-21
PB.8921.4	chr4	+	2937	4	novel_in_catalog	CYP2U1	novel	4944	5	NA	NA	-35	600	no_combination_of_known_junctions	FALSE	canonical	1	5777	junction_1	39598.92316998307	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	95	1093	45.0	1	True	ATTAAA	-11
PB.993.2	chr1	+	3727	19	full-splice_match	SWT1	ENST00000367500.8	3830	19	118	-15	118	15	multi-exon	FALSE	canonical	1	12284	junction_1	12936.884620779381	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	48	2750	25.0	5	True	AATAAA	-17
PB.543.10	chr1	-	2255	4	full-splice_match	TMED5	ENST00000370282.7	6104	4	227	3622	15	832	multi-exon	FALSE	canonical	1	481907	junction_3	127315.80578493256	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	260	949	30.0	4	True	ATTAAA	-27
PB.12218.1	chrX	+	5106	1	antisense	novelGene_ACSL4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-1570	False	AATAAA	-10
PB.4979.6	chr17	-	4375	28	full-splice_match	ACLY	ENST00000393896.6	3682	28	-38	-655	-38	-2	multi-exon	TRUE	canonical	1	214566	junction_15	470945.659081428	NA	1	NA	TRUE	NA	NA	NA	C	coding	1145	3438	47	3484	15.0	-88	False	AATAAA	-22
PB.4979.7	chr17	-	4185	28	novel_in_catalog	ACLY	novel	4339	29	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	7375	junction_18	538694.5762298263	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	1237	3294	15.0	-8	True	AATAAA	-22
PB.8225.4	chr3	+	2426	1	novel_in_catalog	SAMMSON	novel	1657	4	NA	NA	0	-12606	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	134	405	70	474	30.0	0	True	NA	NA
PB.4979.5	chr17	-	4389	29	novel_not_in_catalog	ACLY	novel	4339	29	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	6888	junction_26	506850.8876550068	NA	0	NA	TRUE	NA	NA	NA	C	coding	1122	3369	130	3498	15.0	-13	True	AATAAA	-22
PB.8225.2	chr3	+	2827	5	full-splice_match	SAMMSON	ENST00000641901.1	2727	5	-14	-86	0	86	multi-exon	FALSE	canonical	1	369	junction_3	626.2549401002758	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.8225.3	chr3	+	2789	4	novel_in_catalog	SAMMSON	novel	1657	4	NA	NA	0	120	no_combination_of_known_junctions	FALSE	canonical	1	127	junction_3	733.8003058659003	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-21
PB.4979.1	chr17	-	4306	29	full-splice_match	ACLY	ENST00000352035.6	4339	29	24	9	-1	0	multi-exon	TRUE	canonical	1	614944	junction_16	419376.56846011477	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	108	3413	10.0	9	False	AATAAA	-24
PB.8225.8	chr3	+	2016	4	full-splice_match	SAMMSON	ENST00000483525.2	2055	4	1	38	0	-38	multi-exon	FALSE	canonical	1	565	junction_3	551.2617849584311	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	1	True	NA	NA
PB.8225.9	chr3	+	1814	1	novel_in_catalog	SAMMSON	novel	1657	4	NA	NA	0	-13217	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	134	405	69	473	10.0	1	True	CATAAA	-18
PB.8921.7	chr4	+	4125	4	novel_in_catalog	CYP2U1	novel	4944	5	NA	NA	-28	5	no_combination_of_known_junctions	FALSE	canonical	1	5777	junction_1	39598.92316998307	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	88	1086	20.0	8	True	ATTAAA	-15
PB.400.1	chr1	-	2672	18	novel_in_catalog	TTC39A	novel	1780	7	NA	NA	0	-46	combination_of_known_junctions	TRUE	canonical	1	17876	junction_17	37692.90767271118	NA	0	NA	TRUE	NA	NA	NA	A	coding	577	1734	86	1819	25.0	-1	True	CATAAA	-25
PB.9875.1	chr6	-	2297	1	full-splice_match	C6orf47	ENST00000375911.1	2475	1	140	38	140	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	294	885	686	1570	20.0	7961	False	AATAAA	-43
PB.9875.2	chr6	-	1993	1	full-splice_match	C6orf47	ENST00000375911.1	2475	1	-6	488	-6	-488	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	294	885	832	1716	80.0	-10	True	TTTAAA	-1
PB.8425.24	chr3	+	2649	23	full-splice_match	ARMC8	ENST00000481646.5	3043	23	266	128	2	27	multi-exon	FALSE	canonical	1	108376	junction_2	100272.31593594029	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	141	2120	65.0	2	True	TATAAA	-44
PB.6741.1	chr2	-	3396	3	novel_in_catalog	FAR2P2	novel	2070	4	NA	NA	-366	-1	intron_retention	FALSE	canonical	1	14223	junction_2	9411.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-12
PB.11518.10	chr9	-	2686	12	novel_not_in_catalog	PIGO	novel	2588	13	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	2224	junction_5	91312.59772003074	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	28	1455	25.0	4	True	AATAAA	-10
PB.9016.5	chr4	-	3633	10	novel_in_catalog	SLC10A7	novel	3747	11	NA	NA	-12	-8	no_combination_of_known_junctions	FALSE	canonical	1	843	junction_2	24826.419494433354	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	229	1125	35.0	-34	True	ATTAAA	-23
PB.9016.4	chr4	-	3676	14	novel_not_in_catalog	SLC10A7	novel	3747	11	NA	NA	12	-8	any annotated donor/acceptor	FALSE	canonical	1	11797	junction_1	23162.52312752512	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	194	1270	35.0	1	True	ATTAAA	-23
PB.9016.7	chr4	-	3296	12	full-splice_match	SLC10A7	ENST00000335472.11	2798	12	-10	-488	-10	-469	multi-exon	FALSE	canonical	1	49211	junction_1	12558.156070889805	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	227	1249	75.0	-32	True	NA	NA
PB.9016.1	chr4	-	3865	13	full-splice_match	SLC10A7	ENST00000507030.5	1134	13	-223	-2508	-7	-8	multi-exon	FALSE	canonical	1	37825	junction_2	17146.573505287353	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	224	1300	35.0	-29	True	ATTAAA	-23
PB.9016.3	chr4	-	3715	11	full-splice_match	SLC10A7	ENST00000432059.6	3747	11	24	8	-7	-8	multi-exon	FALSE	canonical	1	5961	junction_7	25019.552917868055	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	224	1207	35.0	-29	True	ATTAAA	-23
PB.9016.2	chr4	-	3675	12	full-splice_match	SLC10A7	ENST00000335472.11	2798	12	72	-949	12	-8	multi-exon	FALSE	canonical	1	49211	junction_1	12558.156070889805	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	145	1167	35.0	-1	True	ATTAAA	-23
PB.4965.5	chr17	+	2599	10	novel_in_catalog	RARA	novel	733	4	NA	NA	-33	0	no_combination_of_known_junctions	FALSE	canonical	1	2464	junction_1	185848.64690852177	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	641	2029	30.0	3	True	NA	NA
PB.4965.4	chr17	+	2507	9	novel_not_in_catalog	RARA	novel	733	4	NA	NA	-36	0	any annotated donor/acceptor	FALSE	canonical	1	6555	junction_3	171127.47328745903	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	1006	1938	35.0	0	True	NA	NA
PB.4965.7	chr17	+	3325	8	full-splice_match	RARA	ENST00000394081.7	2285	8	-193	-847	-193	-1	multi-exon	FALSE	canonical	1	73085	junction_1	141402.95877154387	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	536	1909	20.0	-6	True	AATAAA	-15
PB.4965.6	chr17	+	1847	8	full-splice_match	RARA	ENST00000394081.7	2285	8	438	0	402	0	multi-exon	FALSE	canonical	1	73085	junction_1	141402.95877154387	NA	3	NA	TRUE	NA	NA	NA	C	coding	343	1032	247	1278	35.0	-6985	False	NA	NA
PB.4965.1	chr17	+	2436	9	full-splice_match	RARA	ENST00000254066.9	2414	9	-23	1	-21	0	multi-exon	FALSE	canonical	1	23043	junction_1	154838.5417777479	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	479	1867	35.0	-9	True	NA	NA
PB.9016.8	chr4	-	3365	12	novel_in_catalog	SLC10A7	novel	3747	11	NA	NA	-9	-436	no_combination_of_known_junctions	TRUE	canonical	1	1232	junction_3	25320.344429916167	NA	3	NA	TRUE	NA	NA	NA	C	coding	269	810	226	1035	25.0	-31	True	AATAAA	-17
PB.4965.3	chr17	+	2524	9	full-splice_match	RARA	ENST00000394089.6	2024	9	-36	-464	-36	0	multi-exon	FALSE	canonical	1	159102	junction_1	121509.89043592295	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	567	1955	35.0	0	True	NA	NA
PB.4965.2	chr17	+	3219	9	full-splice_match	RARA	ENST00000394089.6	2024	9	118	-1313	114	1	multi-exon	FALSE	canonical	1	159102	junction_1	121509.89043592295	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	413	1801	15.0	-8033	False	AATAAA	-17
PB.11059.4	chr8	-	2051	10	novel_in_catalog	ZNF395	novel	4808	10	NA	NA	-6	-10	no_combination_of_known_junctions	FALSE	canonical	1	4487	junction_9	121505.69511572515	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	79	1620	95.0	7	True	NA	NA
PB.8921.6	chr4	+	4037	5	full-splice_match	CYP2U1	ENST00000332884.10	4944	5	187	720	-29	-720	multi-exon	FALSE	canonical	1	49286	junction_1	17027.230490819697	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	89	1723	65.0	7	True	NA	NA
PB.6454.7	chr2	+	4172	19	novel_in_catalog	TTC7A	novel	3033	21	NA	NA	-49	-4	combination_of_known_junctions	FALSE	canonical	1	24941	junction_11	73132.49571672072	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	317	1717	40.0	-3	True	NA	NA
PB.11625.35	chr9	-	2601	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	-89	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835621.6377704098	NA	2	1	TRUE	NA	NA	NA	B	coding	438	1317	221	1537	85.0	-17	True	NA	NA
PB.997.6	chr1	+	2060	6	full-splice_match	HMCN1	ENST00000414277.1	720	6	-52	-1288	-52	4	multi-exon	FALSE	canonical	1	47645	junction_3	22030.288235971857	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	113	985	40.0	NA	False	AATAAA	-27
PB.997.2	chr1	+	4272	20	novel_in_catalog	HMCN1	novel	18208	107	NA	NA	-17118	-4	combination_of_known_junctions	FALSE	canonical	1	47645	junction_17	17230.830944444064	NA	3	NA	TRUE	NA	NA	NA	C	coding	1004	3015	191	3205	40.0	NA	False	AATAAA	-19
PB.997.1	chr1	+	5749	27	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	388399	2	-30876	-2	5prime_fragment	FALSE	canonical	1	36417	junction_23	20124.785773713713	NA	0	NA	TRUE	NA	NA	NA	C	coding	1487	4464	217	4680	45.0	-3538	False	AATAAA	-21
PB.11059.1	chr8	-	2126	10	full-splice_match	ZNF395	ENST00000523095.5	1790	10	-64	-272	1	-9	multi-exon	FALSE	canonical	1	30969	junction_9	114605.02988778567	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	153	1694	100.0	0	True	NA	NA
PB.993.7	chr1	+	3760	19	novel_in_catalog	SWT1	novel	3001	19	NA	NA	-21	-80	combination_of_known_junctions	FALSE	canonical	1	11155	junction_1	13108.12714078136	NA	2	NA	TRUE	NA	NA	NA	C	coding	900	2703	176	2878	20.0	-8918	False	AATAAA	-15
PB.6454.4	chr2	+	4304	20	full-splice_match	TTC7A	ENST00000319190.9	5157	20	37	816	37	-5	multi-exon	FALSE	canonical	1	142388	junction_17	49681.081408544625	NA	2	NA	TRUE	NA	NA	NA	C	coding	858	2577	332	2908	40.0	-18	True	NA	NA
PB.2655.1	chr12	-	2326	9	novel_not_in_catalog	CD63	novel	727	6	NA	NA	-10	1799	intron_retention	FALSE	canonical	1	5612	junction_1	3898715.33490914	NA	4	NA	TRUE	NA	NA	NA	C	coding	238	717	70	786	25.0	-2	True	NA	NA
PB.11085.4	chr8	+	3932	12	full-splice_match	ERLIN2	ENST00000519638.2	4766	12	-38	872	-5	-872	multi-exon	FALSE	canonical	1	240359	junction_1	78611.50990590341	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	99	1118	25.0	1	True	ATTAAA	-23
PB.2655.3	chr12	-	899	8	full-splice_match	CD63	ENST00000257857.8	1070	8	211	-40	-9	1	multi-exon	FALSE	canonical	1	7311407	junction_7	2033986.7833335071	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	69	785	15.0	-1	True	NA	NA
PB.2655.2	chr12	-	2316	9	novel_not_in_catalog	CD63	novel	727	6	NA	NA	-7	1786	intron_retention	FALSE	canonical	1	29	junction_1	3900327.0481615365	NA	1	1	TRUE	NA	NA	NA	C	coding	238	717	67	783	20.0	1	True	NA	NA
PB.476.5	chr1	+	2465	5	full-splice_match	FPGT	ENST00000534056.5	1426	5	-24	-1015	1	4	multi-exon	FALSE	canonical	1	2969	junction_4	49997.40335444932	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	37	1059	35.0	-1	True	NA	NA
PB.2655.4	chr12	-	2650	1	novel_in_catalog	CD63	novel	1233	8	NA	NA	-9	367	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	165	498	1	498	100.0	-1	True	NA	NA
PB.7211.8	chr20	+	4268	14	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	3	1	intron_retention	FALSE	canonical	1	81477	junction_2	203787.25872134345	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	261	1364	20.0	-24	True	AATAAA	-30
PB.476.6	chr1	+	4218	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	32	-996	0	996	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	4	NA	TRUE	NA	NA	NA	C	coding	594	1785	36	1820	75.0	0	True	AATAAA	-12
PB.476.9	chr1	+	2967	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	32	255	0	-255	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	36	1820	25.0	0	True	TATAAA	-36
PB.476.8	chr1	+	3302	5	novel_not_in_catalog	FPGT	novel	3254	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1829	junction_4	61336.484169293566	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	564	1901	35.0	0	True	NA	NA
PB.6072.1	chr19	+	936	2	novel_not_in_catalog	GEMIN7	novel	848	2	NA	NA	-3503	42	any annotated donor/acceptor	FALSE	canonical	1	25601	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	140	535	30.0	-15	True	NA	NA
PB.5018.1	chr17	+	2219	1	antisense	novelGene_CCDC200_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	178	537	1	537	5.0	NA	False	NA	NA
PB.5429.9	chr18	-	3426	11	novel_in_catalog	SS18	novel	3414	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	5047	junction_8	249071.1747901792	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	320	1327	15.0	4	True	AATAAA	-15
PB.5429.8	chr18	-	3479	12	novel_not_in_catalog	SS18	novel	3414	11	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	1227	junction_7	277598.76221932704	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	361	1380	15.0	5	True	AATAAA	-15
PB.993.6	chr1	+	3156	5	novel_not_in_catalog	SWT1	novel	3001	19	NA	NA	-39	-2088	any annotated donor/acceptor	FALSE	canonical	1	11155	junction_1	15621.62262698725	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-8936	False	NA	NA
PB.6454.5	chr2	+	4500	3	incomplete-splice_match	TTC7A	ENST00000461601.5	2204	17	-58	89360	43	-45329	intron_retention	FALSE	canonical	1	220861	junction_1	20076.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	326	1006	20.0	-12	True	AATAAA	-15
PB.10881.1	chr7	+	3160	1	novel_in_catalog	TBXAS1	novel	2080	15	NA	NA	-7	34915	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	73	222	238	459	80.0	-749	False	NA	NA
PB.5429.3	chr18	-	3522	11	full-splice_match	SS18	ENST00000579640.5	1840	11	-47	-1635	-5	3	multi-exon	TRUE	canonical	1	8993	junction_9	248011.04909426917	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	411	1418	20.0	-1	True	AATAAA	-20
PB.5429.2	chr18	-	3713	13	novel_in_catalog	SS18	novel	3414	11	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	1	2647	junction_10	272240.76656685665	NA	3	NA	TRUE	NA	NA	NA	C	coding	366	1101	509	1609	20.0	579	False	AATAAA	-20
PB.5429.1	chr18	-	3493	12	novel_not_in_catalog	SS18	novel	3414	11	NA	NA	6	4	any annotated donor/acceptor	TRUE	canonical	1	550	junction_9	259865.1131657116	NA	4	1	TRUE	NA	NA	NA	C	coding	344	1035	354	1388	20.0	10	True	AATAAA	-21
PB.5429.7	chr18	-	3580	12	novel_in_catalog	SS18	novel	3414	11	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	5047	junction_9	258214.15954142783	NA	21	2	TRUE	NA	NA	NA	C	coding	366	1101	381	1481	15.0	546	False	AATAAA	-15
PB.5429.6	chr18	-	3619	12	novel_in_catalog	SS18	novel	3414	11	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	2787	junction_9	270305.0874353302	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	513	1520	15.0	580	False	AATAAA	-15
PB.5429.5	chr18	-	3608	12	novel_in_catalog	SS18	novel	3414	11	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	8993	junction_10	257376.710958313	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	409	1509	15.0	1	True	AATAAA	-15
PB.5429.4	chr18	-	3387	11	full-splice_match	SS18	ENST00000415083.6	3414	11	26	1	-1	-1	multi-exon	FALSE	canonical	1	173602	junction_4	181190.7365959971	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	31	1287	10.0	13	True	AATAAA	-16
PB.10881.3	chr7	+	1934	13	full-splice_match	TBXAS1	ENST00000448866.5	1963	13	27	2	2	0	multi-exon	FALSE	canonical	1	142355	junction_11	54590.96924775857	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	141	1742	25.0	-13	True	AATAAA	-30
PB.6595.3	chr2	-	2903	15	full-splice_match	GGCX	ENST00000233838.8	7569	15	34	4632	-2	475	multi-exon	FALSE	canonical	1	192063	junction_2	35616.41594826745	NA	2	NA	TRUE	NA	NA	NA	C	coding	758	2277	48	2324	50.0	-11	True	NA	NA
PB.4033.5	chr15	-	1829	6	novel_not_in_catalog	EFL1	novel	3675	20	NA	NA	-1969	-5	any annotated donor/acceptor	FALSE	canonical	1	302	junction_5	94415.24915097137	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	77	1702	45.0	8456	False	AATAAA	-12
PB.4033.4	chr15	-	3501	19	novel_in_catalog	EFL1	novel	3675	20	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	283	junction_14	71415.28019657666	NA	2	NA	TRUE	NA	NA	NA	C	coding	1074	3225	141	3365	45.0	-42	True	AATAAA	-21
PB.4033.7	chr15	-	2285	18	incomplete-splice_match	EFL1	ENST00000268206.11	3675	20	42	22066	-7	-139	3prime_fragment	FALSE	canonical	1	1302	junction_4	52619.21103018788	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2157	128	2284	60.0	-29	True	AAAAAG	-16
PB.4033.6	chr15	-	3145	19	incomplete-splice_match	EFL1	ENST00000268206.11	3675	20	58	8568	9	-8557	3prime_fragment	FALSE	canonical	1	1302	junction_5	55119.932819514375	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3033	112	3144	60.0	-13	True	NA	NA
PB.4033.1	chr15	-	3630	20	full-splice_match	EFL1	ENST00000268206.11	3675	20	51	-6	2	6	multi-exon	FALSE	canonical	1	1302	junction_6	59601.27879751549	NA	0	NA	TRUE	NA	NA	NA	C	coding	1120	3363	119	3481	35.0	-20	True	AATAAA	-34
PB.4033.3	chr15	-	3752	20	novel_not_in_catalog	EFL1	novel	3675	20	NA	NA	13	4	any annotated donor/acceptor	FALSE	canonical	1	1302	junction_6	66549.0510797692	NA	0	NA	TRUE	NA	NA	NA	C	coding	1165	3498	108	3605	35.0	-9	True	AATAAA	-32
PB.9471.1	chr5	-	3191	22	full-splice_match	BRD8	ENST00000230901.9	3198	22	-8	15	0	0	multi-exon	FALSE	canonical	1	179119	junction_12	127448.06353937477	NA	1	NA	TRUE	NA	NA	NA	C	coding	951	2856	25	2880	55.0	-9	True	AATAAA	-4
PB.6458.2	chr2	+	4492	8	incomplete-splice_match	MSH6	ENST00000234420.9	7476	10	47	3157	1	-1	intron_retention	FALSE	canonical	1	249522	junction_1	216602.38880059114	NA	6	NA	TRUE	NA	NA	NA	C	coding	1365	4098	106	4203	40.0	-7960	False	AATAAA	-11
PB.9749.1	chr6	+	1619	10	novel_not_in_catalog	SIRT5	novel	4382	9	NA	NA	-292	-2271	any annotated donor/acceptor	FALSE	canonical	1	5550	junction_1	56976.01642991744	NA	3	NA	TRUE	NA	NA	NA	C	coding	310	933	265	1197	40.0	-390	False	AATAAA	-15
PB.6458.1	chr2	+	4097	9	novel_in_catalog	MSH6	novel	833	4	NA	NA	-23	0	intron_retention	FALSE	canonical	1	5010	junction_8	279387.4348355702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1272	3819	130	3948	40.0	-7984	False	AATAAA	-12
PB.6458.6	chr2	+	4110	10	novel_in_catalog	MSH6	novel	833	4	NA	NA	-51	0	intron_retention	FALSE	canonical	1	3960	junction_1	294349.0751141291	NA	0	NA	TRUE	NA	NA	NA	C	coding	1261	3786	240	4025	40.0	-7185	False	AATAAA	-12
PB.9297.10	chr5	+	4261	21	novel_not_in_catalog	HMGCR	novel	3395	20	NA	NA	-13	305	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	256156.1026755511	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	1160	2875	25.0	-2	True	AATAAA	-22
PB.6458.4	chr2	+	4123	10	full-splice_match	MSH6	ENST00000234420.9	7476	10	197	3156	109	0	multi-exon	FALSE	canonical	1	249522	junction_1	241153.64916865353	NA	2	NA	TRUE	NA	NA	NA	C	coding	1261	3786	253	4038	40.0	-7810	False	AATAAA	-12
PB.6458.5	chr2	+	3986	10	novel_not_in_catalog	MSH6	novel	833	4	NA	NA	3	0	intron_retention	FALSE	canonical	1	3449	junction_1	294470.8396574153	NA	0	NA	TRUE	NA	NA	NA	C	coding	1261	3786	116	3901	40.0	9	True	AATAAA	-12
PB.9420.11	chr5	+	2315	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	15	-517	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	157911.36714701698	NA	2	1	TRUE	NA	NA	NA	C	coding	394	1185	24	1208	90.0	-7	True	NA	NA
PB.4838.21	chr17	+	3529	10	novel_in_catalog	WSB1	novel	943	4	NA	NA	-1	-18	combination_of_known_junctions	FALSE	canonical	1	4437	junction_2	566555.1339562834	NA	1	NA	TRUE	NA	NA	NA	C	coding	39	120	1023	1142	90.0	-3	True	NA	NA
PB.4838.20	chr17	+	4838	8	novel_in_catalog	WSB1	novel	943	4	NA	NA	-2	-193	intron_retention	FALSE	canonical	1	787038	junction_1	313926.359398155	NA	3	NA	TRUE	NA	NA	NA	C	coding	247	744	287	1030	85.0	-4	True	NA	NA
PB.4838.23	chr17	+	2051	9	full-splice_match	WSB1	ENST00000262394.6	5139	9	31	3057	-1	-18	multi-exon	FALSE	canonical	1	414511	junction_5	392362.5030470666	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	286	1551	90.0	-3	True	NA	NA
PB.4838.22	chr17	+	2655	5	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	-1	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	410681.3457891501	NA	2	NA	TRUE	NA	NA	NA	C	coding	212	639	286	924	75.0	-3	True	ATTAAA	-8
PB.4838.25	chr17	+	4286	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	0	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	568459.0162009032	NA	4	1	TRUE	NA	NA	NA	C	coding	288	867	283	1149	75.0	0	True	ATTAAA	-8
PB.4838.24	chr17	+	2800	9	full-splice_match	WSB1	ENST00000262394.6	5139	9	33	2306	-1	-11	multi-exon	FALSE	canonical	1	414511	junction_5	392362.5030470666	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	284	1549	70.0	-1	True	ATTAAA	-9
PB.4838.27	chr17	+	3290	8	novel_in_catalog	WSB1	novel	943	4	NA	NA	0	-18	no_combination_of_known_junctions	FALSE	canonical	1	19378	junction_6	463390.5486843684	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	283	1017	90.0	0	True	NA	NA
PB.4838.26	chr17	+	4096	7	novel_in_catalog	WSB1	novel	943	4	NA	NA	0	-18	intron_retention	FALSE	canonical	1	30337	junction_1	545840.1305658452	NA	2	NA	TRUE	NA	NA	NA	C	coding	219	660	2937	3596	90.0	0	True	NA	NA
PB.4838.29	chr17	+	3983	8	novel_in_catalog	WSB1	novel	943	4	NA	NA	2	-12	combination_of_known_junctions	FALSE	canonical	1	30337	junction_1	512605.24528235133	NA	6	NA	TRUE	NA	NA	NA	C	coding	219	660	2074	2733	75.0	2	True	ATTAAA	-8
PB.4838.28	chr17	+	2219	9	full-splice_match	WSB1	ENST00000262394.6	5139	9	34	2886	0	153	multi-exon	FALSE	canonical	1	414511	junction_5	392362.5030470666	NA	2	1	TRUE	NA	NA	NA	C	coding	421	1266	283	1548	75.0	0	True	NA	NA
PB.2641.1	chr12	+	2190	2	full-splice_match	HOXC13	ENST00000243056.4	2423	2	230	3	230	-3	multi-exon	FALSE	canonical	1	22953	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	274	825	81	905	20.0	-3198	False	AATAAA	-17
PB.8186.8	chr3	+	2016	13	novel_in_catalog	CCDC66	novel	1983	13	NA	NA	2	-21	intron_retention	FALSE	canonical	1	14306	junction_2	36753.388103362515	NA	2	NA	TRUE	NA	NA	NA	C	coding	636	1908	107	2014	55.0	38	True	GATAAA	-15
PB.693.12	chr1	+	3139	23	novel_not_in_catalog	AC242426.2	novel	573	3	NA	NA	69302	43100	intron_retention	FALSE	non_canonical	0	0	junction_10	186680.96883549064	NA	28	2	TRUE	NA	NA	NA	B	coding	470	1413	1477	2889	15.0	1	True	AATAAA	-12
PB.8186.1	chr3	+	3075	17	novel_in_catalog	CCDC66	novel	1983	13	NA	NA	-3	0	intron_retention	FALSE	canonical	1	3557	junction_1	41983.76783906899	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	131	2875	95.0	-5	True	AATAAA	-32
PB.8186.2	chr3	+	3117	18	full-splice_match	CCDC66	ENST00000394672.7	3096	18	0	-21	0	0	multi-exon	FALSE	canonical	1	63553	junction_3	27648.826489047475	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2847	71	2917	95.0	-2	True	AATAAA	-32
PB.8186.3	chr3	+	2985	18	novel_not_in_catalog	CCDC66	novel	1983	13	NA	NA	3	0	intron_retention	FALSE	canonical	1	11811	junction_8	35143.342192761185	NA	2	NA	TRUE	NA	NA	NA	C	coding	905	2718	68	2785	95.0	1	True	AATAAA	-32
PB.8186.4	chr3	+	3092	18	novel_not_in_catalog	CCDC66	novel	1983	13	NA	NA	7	0	intron_retention	FALSE	canonical	1	8800	junction_10	35292.82425188923	NA	2	NA	TRUE	NA	NA	NA	C	coding	942	2829	64	2892	95.0	5	True	AATAAA	-32
PB.8186.5	chr3	+	2068	14	incomplete-splice_match	CCDC66	ENST00000394672.7	3096	18	13	4518	-2	-22	3prime_fragment	FALSE	canonical	1	63553	junction_3	28229.804683794875	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2010	58	2067	55.0	11	True	GATAAA	-14
PB.8186.6	chr3	+	2984	17	incomplete-splice_match	CCDC66	ENST00000394672.7	3096	18	24	1718	6	-1683	3prime_fragment	FALSE	canonical	1	63553	junction_3	28197.095717508633	NA	2	NA	TRUE	NA	NA	NA	C	coding	921	2766	47	2812	20.0	22	True	AATAAA	-26
PB.8186.7	chr3	+	2219	14	incomplete-splice_match	CCDC66	ENST00000394672.7	3096	18	33	4347	3	149	3prime_fragment	FALSE	canonical	1	63553	junction_3	28229.804683794875	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2181	38	2218	65.0	31	True	NA	NA
PB.1438.24	chr10	+	3387	23	novel_in_catalog	CCAR1	novel	552	6	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	19707	junction_1	181921.27523999003	NA	1	NA	TRUE	NA	NA	NA	C	coding	1057	3171	215	3385	60.0	4	True	AAAAAG	-35
PB.10767.4	chr7	+	2966	16	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	-11	-167	intron_retention	FALSE	canonical	1	243514	junction_1	96670.09557849602	NA	1	NA	TRUE	NA	NA	NA	C	coding	733	2202	483	2684	25.0	-3323	False	AATATA	-10
PB.1438.20	chr10	+	3269	23	incomplete-splice_match	CCAR1	ENST00000265872.10	4683	25	25	4061	0	0	3prime_fragment	FALSE	canonical	1	362651	junction_1	142522.81188586375	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3174	95	3268	55.0	0	True	AAAAAG	-37
PB.1438.21	chr10	+	2748	18	novel_in_catalog	CCAR1	novel	552	6	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	19707	junction_1	159542.95074216087	NA	1	NA	TRUE	NA	NA	NA	C	coding	843	2529	219	2747	45.0	0	True	GATAAA	-23
PB.1438.22	chr10	+	4033	16	novel_in_catalog	CCAR1	novel	552	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	362651	junction_1	110280.36049463507	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	94	1722	80.0	1	True	NA	NA
PB.1438.23	chr10	+	3653	24	novel_not_in_catalog	CCAR1	novel	552	6	NA	NA	1	194	any annotated donor/acceptor	FALSE	canonical	1	23132	junction_11	216376.60792193643	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	1832	3370	35.0	1	True	AATAAA	-12
PB.4979.24	chr17	-	3670	28	full-splice_match	ACLY	ENST00000353196.5	4318	28	5	643	5	0	multi-exon	FALSE	canonical	1	214566	junction_15	442075.8781063223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	159	3434	10.0	-42	False	AATAAA	-20
PB.4979.21	chr17	-	4094	29	full-splice_match	ACLY	ENST00000352035.6	4339	29	33	212	-3	-189	multi-exon	FALSE	canonical	1	614944	junction_16	419376.56846011477	NA	1	NA	TRUE	NA	NA	NA	C	coding	1101	3306	99	3404	35.0	-4	True	TTTAAA	-11
PB.4979.23	chr17	-	3644	29	full-splice_match	ACLY	ENST00000352035.6	4339	29	33	662	-3	4	multi-exon	FALSE	canonical	1	614944	junction_16	419376.56846011477	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	99	3404	10.0	-4	True	AATAAA	-24
PB.3515.1	chr14	-	5326	6	full-splice_match	VTI1B	ENST00000554659.5	5351	6	199	-174	-22	174	multi-exon	FALSE	canonical	1	298204	junction_5	66542.47644144304	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	144	842	35.0	-1	True	AATAAA	-22
PB.3515.3	chr14	-	5081	5	novel_in_catalog	VTI1B	novel	5351	6	NA	NA	-25	-15	intron_retention	FALSE	canonical	1	38328	junction_4	168794.00584292086	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	211	786	45.0	-4	True	AGTAAA	-14
PB.3515.2	chr14	-	5136	6	full-splice_match	VTI1B	ENST00000554659.5	5351	6	200	15	-21	-15	multi-exon	FALSE	canonical	1	298204	junction_5	66542.47644144304	NA	40	NA	TRUE	NA	NA	NA	C	coding	232	699	143	841	45.0	0	True	AGTAAA	-14
PB.3515.5	chr14	-	5285	7	full-splice_match	VTI1B	ENST00000216456.6	1103	7	-9	-4173	-9	-16	multi-exon	FALSE	canonical	1	28926	junction_6	181379.22976888934	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	476	991	50.0	12	True	AGTAAA	-13
PB.3515.7	chr14	-	1766	6	full-splice_match	VTI1B	ENST00000554659.5	5351	6	199	3386	-22	691	multi-exon	FALSE	canonical	1	298204	junction_5	66542.47644144304	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	144	842	35.0	-1	True	AATAAA	-22
PB.3515.6	chr14	-	4583	6	full-splice_match	VTI1B	ENST00000554659.5	5351	6	-67	835	-67	-835	multi-exon	FALSE	canonical	1	298204	junction_5	66542.47644144304	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	410	1108	15.0	4	True	AATAAA	-12
PB.6489.23	chr2	-	4582	23	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-13	0	intron_retention	FALSE	canonical	1	6944	junction_18	503145.5676580754	NA	2	NA	TRUE	NA	NA	NA	C	coding	992	2979	719	3697	20.0	-16	True	AATAAA	-15
PB.3515.8	chr14	-	1091	6	full-splice_match	VTI1B	ENST00000554659.5	5351	6	188	4072	-33	5	multi-exon	FALSE	canonical	1	298204	junction_5	66542.47644144304	NA	4	NA	TRUE	NA	NA	NA	C	coding	232	699	155	853	35.0	-12	True	AATAAA	-25
PB.6489.21	chr2	-	4666	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	11	NA	TRUE	NA	NA	NA	C	coding	1067	3204	578	3781	20.0	-18	True	AATAAA	-15
PB.1382.6	chr10	-	2410	4	full-splice_match	HNRNPF	ENST00000357065.8	2617	4	-24	231	-24	174	multi-exon	FALSE	canonical	1	418897	junction_3	698402.3913494761	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	377	1621	35.0	1341	False	AATAAA	-27
PB.6489.27	chr2	-	4545	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-13	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	5	1	TRUE	NA	NA	NA	C	coding	1067	3204	457	3660	20.0	-16	True	AATAAA	-15
PB.6454.1	chr2	+	3024	20	full-splice_match	TTC7A	ENST00000319190.9	5157	20	46	2087	46	0	multi-exon	FALSE	canonical	1	142388	junction_17	49681.081408544625	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2577	323	2899	10.0	-9	True	AATACA	-16
PB.6489.25	chr2	-	4574	22	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-34	0	intron_retention	FALSE	canonical	1	6944	junction_18	389709.322348444	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	1110	3689	20.0	31	True	AATAAA	-15
PB.6489.24	chr2	-	4604	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-8	0	intron_retention	FALSE	canonical	1	3279	junction_13	369516.11099708773	NA	3	NA	TRUE	NA	NA	NA	C	coding	1001	3006	714	3719	20.0	-11	True	AATAAA	-15
PB.3857.14	chr15	-	3793	1	novel_in_catalog	COPS2	novel	6628	13	NA	NA	-9	-12563	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-15	True	AATAAA	-16
PB.539.3	chr1	+	844	7	incomplete-splice_match	RPL5	ENST00000370321.8	1028	8	2	1308	2	10	3prime_fragment	FALSE	canonical	1	94364	junction_6	2867817.6664656475	NA	1	1	TRUE	NA	NA	NA	C	coding	257	771	74	844	70.0	2	True	NA	NA
PB.8164.7	chr3	-	3490	9	full-splice_match	WDR82	ENST00000296490.7	4293	9	264	539	-58	0	multi-exon	FALSE	canonical	1	86085	junction_6	139857.95406031614	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	19	960	95.0	9	True	NA	NA
PB.3857.10	chr15	-	1897	13	full-splice_match	COPS2	ENST00000388901.9	6628	13	38	4693	-10	-71	multi-exon	FALSE	canonical	1	407515	junction_9	160355.27195652158	NA	3	NA	TRUE	NA	NA	NA	C	coding	443	1332	37	1368	40.0	-16	True	AGTAAA	-11
PB.3857.11	chr15	-	1971	13	full-splice_match	COPS2	ENST00000299259.10	2036	13	68	-3	-3	3	multi-exon	FALSE	canonical	1	259275	junction_9	194653.59068476548	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	16	1368	10.0	5	True	AATAAA	-20
PB.3857.12	chr15	-	1866	13	full-splice_match	COPS2	ENST00000299259.10	2036	13	49	121	-8	65	multi-exon	FALSE	canonical	1	259275	junction_9	194653.59068476548	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	35	1387	30.0	-14	True	ATTAAA	-36
PB.3857.13	chr15	-	1855	13	full-splice_match	COPS2	ENST00000388901.9	6628	13	29	4744	-19	64	multi-exon	FALSE	canonical	1	407515	junction_9	160355.27195652158	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	46	1377	35.0	20	False	ATTAAA	-35
PB.3168.1	chr13	+	1963	2	full-splice_match	ARL11	ENST00000282026.1	3760	2	160	1637	-64	-2	multi-exon	FALSE	canonical	1	37314	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	176	766	65.0	-85	False	AATAAA	-24
PB.7588.5	chr22	+	2260	4	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	-9507	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	NA	False	AAGAAA	-34
PB.2939.14	chr12	-	2088	16	novel_in_catalog	TAOK3	novel	4301	21	NA	NA	-11	4227	combination_of_known_junctions	FALSE	canonical	1	43801	junction_15	111238.78771595615	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	408	2087	65.0	-11	True	NA	NA
PB.3168.2	chr13	+	2011	3	novel_in_catalog	ARL11	novel	3760	2	NA	NA	-43	1	no_combination_of_known_junctions	FALSE	canonical	1	3902	junction_2	2725.0	NA	10	NA	TRUE	NA	NA	NA	C	coding	196	591	221	811	60.0	-64	False	AATAAA	-27
PB.2939.12	chr12	-	2296	17	novel_not_in_catalog	TAOK3	novel	4301	21	NA	NA	-1	4227	any annotated donor/acceptor	FALSE	canonical	1	9264	junction_16	145874.63505094397	NA	1	1	TRUE	NA	NA	NA	C	coding	560	1680	616	2295	65.0	525	False	NA	NA
PB.2939.13	chr12	-	2153	16	incomplete-splice_match	TAOK3	ENST00000392533.7	4384	21	19	27414	19	4227	3prime_fragment	FALSE	canonical	1	145199	junction_15	97048.07474099284	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	473	2152	65.0	-20	True	NA	NA
PB.11390.1	chr8	+	1882	2	full-splice_match	EXOSC4	ENST00000527954.1	1065	2	-749	-68	26	0	multi-exon	FALSE	canonical	1	704920	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	241	726	1111	1836	20.0	2	True	AATAAA	-19
PB.2939.11	chr12	-	3329	22	novel_not_in_catalog	TAOK3	novel	4301	21	NA	NA	-11	-19	any annotated donor/acceptor	FALSE	canonical	1	25888	junction_8	166672.38749961212	NA	1	NA	TRUE	NA	NA	NA	C	coding	907	2724	585	3308	90.0	-11	True	ATTAAA	-15
PB.5720.8	chr19	-	5416	14	novel_in_catalog	KANK2	novel	5162	13	NA	NA	-5	-1	combination_of_known_junctions	TRUE	canonical	1	20226	junction_13	174403.38331068298	NA	5	1	TRUE	NA	NA	NA	C	coding	851	2556	574	3129	10.0	-2	True	AATAAA	-17
PB.5720.5	chr19	-	4048	10	novel_not_in_catalog	KANK2	novel	5162	13	NA	NA	-4230	-1	any annotated donor/acceptor	FALSE	canonical	1	2641	junction_9	181786.1001574904	NA	3	NA	TRUE	NA	NA	NA	C	coding	530	1593	169	1761	10.0	-1492	False	AATAAA	-17
PB.5720.6	chr19	-	3752	11	novel_not_in_catalog	KANK2	novel	5162	13	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	340	junction_10	173430.41879312866	NA	3	NA	TRUE	NA	NA	NA	C	coding	464	1395	71	1465	10.0	-2	True	AATAAA	-17
PB.9420.12	chr5	+	2578	5	full-splice_match	PHAX	ENST00000297540.4	4288	5	677	1033	20	741	multi-exon	FALSE	canonical	1	334636	junction_4	41985.22598486282	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	19	1203	90.0	-2	True	NA	NA
PB.5720.3	chr19	-	4983	12	novel_in_catalog	KANK2	novel	5162	13	NA	NA	3	0	no_combination_of_known_junctions	TRUE	canonical	1	45948	junction_11	159220.70237210917	NA	3	NA	TRUE	NA	NA	NA	C	coding	851	2556	140	2695	5.0	-11	True	AATAAA	-18
PB.5720.2	chr19	-	5215	13	full-splice_match	KANK2	ENST00000586659.5	5162	13	-56	3	-29	0	multi-exon	FALSE	canonical	1	89278	junction_11	150876.02882911207	NA	3	NA	TRUE	NA	NA	NA	C	coding	851	2556	372	2927	5.0	5957	False	AATAAA	-18
PB.7081.4	chr2	-	2352	7	full-splice_match	HJURP	ENST00000432087.5	3027	7	13	662	13	-660	multi-exon	FALSE	canonical	1	3816	junction_4	121726.10292476302	NA	1	1	TRUE	NA	NA	NA	C	coding	687	2064	75	2138	15.0	-19	True	AATAAA	-34
PB.10767.9	chr7	+	2056	14	novel_not_in_catalog	KMT2E	novel	6874	27	NA	NA	7	-15	intron_retention	FALSE	canonical	1	321	junction_12	185146.32514027043	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	454	1950	80.0	-8	True	NA	NA
PB.11282.8	chr8	-	9886	59	full-splice_match	UBR5	ENST00000520539.5	10297	59	90	321	8	-321	multi-exon	FALSE	canonical	1	132976	junction_51	154972.57397989754	NA	1	NA	TRUE	NA	NA	NA	C	coding	2799	8400	518	8917	45.0	-6	True	AATAAA	-32
PB.11282.9	chr8	-	9772	59	novel_not_in_catalog	UBR5	novel	10297	59	NA	NA	13	-321	any annotated donor/acceptor	FALSE	canonical	1	30703	junction_20	176321.67234361815	NA	28	6	TRUE	NA	NA	NA	C	coding	1846	5541	513	6053	45.0	-1	True	AATAAA	-32
PB.3446.12	chr14	-	3610	5	novel_not_in_catalog	GMFB	novel	6721	4	NA	NA	-12	676	intron_retention	FALSE	non_canonical	0	0	junction_3	137507.63318153468	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-14	True	AATAAA	-17
PB.3446.10	chr14	-	4153	7	novel_not_in_catalog	GMFB	novel	6721	4	NA	NA	6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	144044.55209490648	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	5	True	AATAAA	-11
PB.3446.11	chr14	-	1480	7	full-splice_match	GMFB	ENST00000358056.7	4301	7	171	2650	0	723	multi-exon	FALSE	canonical	1	221653	junction_3	45619.978118753585	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	99	527	20.0	-1	True	AATAAA	-26
PB.11282.2	chr8	-	11017	59	full-splice_match	UBR5	ENST00000520539.5	10297	59	35	-755	35	755	multi-exon	TRUE	canonical	1	132976	junction_51	154972.57397989754	NA	1	NA	TRUE	NA	NA	NA	C	coding	2799	8400	573	8972	30.0	-1	True	AATAAA	-32
PB.6595.1	chr2	-	3253	15	full-splice_match	GGCX	ENST00000233838.8	7569	15	-11	4327	-11	780	multi-exon	FALSE	canonical	1	192063	junction_2	35616.41594826745	NA	2	NA	TRUE	NA	NA	NA	C	coding	758	2277	93	2369	35.0	-1	True	ATTAAA	-38
PB.1045.4	chr1	+	2793	8	novel_in_catalog	TMEM183A	novel	3019	8	NA	NA	-8	-1309	intron_retention	FALSE	canonical	1	241	junction_7	49389.18595302053	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	140	736	25.0	4	True	AATAAA	-27
PB.4635.1	chr16	+	1641	11	full-splice_match	GAS8	ENST00000268699.8	3185	11	51	1493	-2	6	multi-exon	FALSE	canonical	1	53031	junction_1	47594.7261401933	NA	2	NA	TRUE	NA	NA	NA	C	coding	478	1437	72	1508	5.0	-42	True	AATGAA	-22
PB.4635.3	chr16	+	3090	11	full-splice_match	GAS8	ENST00000268699.8	3185	11	94	1	11	-1	multi-exon	FALSE	canonical	1	53031	junction_1	47594.7261401933	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	29	1465	20.0	1	True	NA	NA
PB.4635.2	chr16	+	3135	10	novel_in_catalog	GAS8	novel	546	5	NA	NA	9	-2	intron_retention	FALSE	canonical	1	11128	junction_2	71245.12934428536	NA	3	2	TRUE	NA	NA	NA	C	coding	286	861	661	1521	20.0	-1	True	NA	NA
PB.2331.2	chr11	+	2675	4	full-splice_match	SC5D	ENST00000531140.1	767	4	-19	-1889	-19	0	multi-exon	FALSE	canonical	1	380742	junction_1	138937.86337864213	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	88	717	35.0	1	True	AATAAA	-15
PB.2331.3	chr11	+	1652	5	full-splice_match	SC5D	ENST00000264027.8	2456	5	288	516	-18	335	multi-exon	FALSE	canonical	1	380742	junction_1	195442.764794933	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	87	986	50.0	2	True	AATAAA	-10
PB.3501.8	chr14	+	2700	12	full-splice_match	FNTB	ENST00000246166.2	2834	12	188	-54	13	0	multi-exon	FALSE	canonical	1	134304	junction_1	22863.08209087775	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	47	1360	15.0	13	True	AATAAA	-17
PB.2331.1	chr11	+	1513	5	full-splice_match	SC5D	ENST00000264027.8	2456	5	278	665	-28	186	multi-exon	FALSE	canonical	1	380742	junction_1	195442.764794933	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	97	996	55.0	-8	True	AATAAA	-18
PB.2331.6	chr11	+	2495	5	full-splice_match	SC5D	ENST00000264027.8	2456	5	310	-349	4	349	multi-exon	FALSE	canonical	1	380742	junction_1	195442.764794933	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	65	964	30.0	-9	True	AGTAAA	-16
PB.2331.7	chr11	+	1623	3	full-splice_match	SC5D	ENST00000534455.5	921	3	83	-785	5	0	multi-exon	FALSE	canonical	1	380742	junction_1	169590.5	NA	8	1	TRUE	NA	NA	NA	C	coding	116	351	64	414	95.0	-8	True	NA	NA
PB.2331.4	chr11	+	6881	5	full-splice_match	SC5D	ENST00000264027.8	2456	5	289	-4714	-17	4714	multi-exon	FALSE	canonical	1	380742	junction_1	195442.764794933	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	86	985	20.0	3	True	NA	NA
PB.2331.5	chr11	+	2407	2	full-splice_match	SC5D	ENST00000524683.5	2391	2	-16	0	-4	0	multi-exon	FALSE	canonical	1	380742	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-17	False	NA	NA
PB.3501.2	chr14	+	2519	4	full-splice_match	CHURC1	ENST00000552002.6	2566	4	9	38	9	-38	multi-exon	FALSE	canonical	1	1001868	junction_2	217441.6493841253	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	64	402	85.0	-25	True	NA	NA
PB.3501.3	chr14	+	2744	13	full-splice_match	CHURC1-FNTB	ENST00000552941.5	1847	13	-50	-847	-50	847	multi-exon	FALSE	canonical	1	4222	junction_2	368215.8155761505	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	231	1406	15.0	-23	True	AATAAA	-15
PB.2331.8	chr11	+	2071	5	full-splice_match	SC5D	ENST00000264027.8	2456	5	321	64	3	0	multi-exon	FALSE	canonical	1	380742	junction_1	195442.764794933	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	54	953	35.0	2	True	AATAAA	-15
PB.2331.9	chr11	+	2293	5	full-splice_match	SC5D	ENST00000392789.2	2258	5	-32	-3	-32	3	multi-exon	FALSE	canonical	1	12387	junction_1	335759.1536685932	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	270	1169	30.0	48	False	AATAAA	-21
PB.3501.6	chr14	+	2339	4	full-splice_match	CHURC1	ENST00000552002.6	2566	4	22	205	3	-205	multi-exon	FALSE	canonical	1	1001868	junction_2	217441.6493841253	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	51	389	80.0	-12	True	NA	NA
PB.5733.3	chr19	+	2546	4	novel_in_catalog	ZNF440	novel	4189	4	NA	NA	-9	34277	no_combination_of_known_junctions	FALSE	canonical	1	10	junction_1	29113.685102065356	NA	18	NA	TRUE	NA	NA	NA	C	coding	487	1464	174	1637	35.0	-17	True	AATAAA	-22
PB.3501.4	chr14	+	2807	14	full-splice_match	CHURC1-FNTB	ENST00000549987.1	1468	14	-51	-1288	-43	846	multi-exon	FALSE	canonical	1	5057	junction_3	404089.89497485943	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	55	1470	15.0	-16	True	AATAAA	-14
PB.3501.5	chr14	+	3493	4	full-splice_match	CHURC1	ENST00000552002.6	2566	4	20	-947	1	-36	multi-exon	FALSE	canonical	1	1001868	junction_2	217441.6493841253	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	53	391	80.0	-14	True	NA	NA
PB.10919.2	chr7	+	1726	4	full-splice_match	ATP6V0E2	ENST00000425642.2	1649	4	-75	-2	-8	1	multi-exon	FALSE	canonical	1	502225	junction_1	93172.87497025206	NA	2	NA	TRUE	NA	NA	NA	C	coding	111	336	9	344	25.0	-8	True	AATAAA	-20
PB.5733.2	chr19	+	4607	4	full-splice_match	ZNF440	ENST00000304060.9	4189	4	-11	-407	-11	407	multi-exon	FALSE	canonical	1	33676	junction_1	20060.422766122243	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	176	1963	35.0	-19	True	AATAAA	-16
PB.11346.9	chr8	+	2012	14	incomplete-splice_match	PHF20L1	ENST00000622263.4	3375	21	6	20599	6	-10	3prime_fragment	FALSE	canonical	1	29156	junction_5	98145.0771165473	NA	1	1	TRUE	NA	NA	NA	C	coding	565	1695	316	2010	75.0	-24	True	NA	NA
PB.1472.2	chr10	-	5910	21	novel_in_catalog	USP54	novel	4370	9	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	3916	junction_20	41041.87254777126	NA	0	NA	TRUE	NA	NA	NA	B	coding	1563	4692	131	4822	15.0	-1	True	AATAAA	-20
PB.1472.1	chr10	-	6100	22	novel_not_in_catalog	USP54	novel	4370	9	NA	NA	106	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	40000.54886993042	NA	10	1	TRUE	NA	NA	NA	B	coding	1610	4833	179	5011	15.0	255	False	AATAAA	-21
PB.9743.3	chr6	+	2198	4	novel_in_catalog	EDN1	novel	2033	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	113181	junction_1	91700.22667729163	NA	3	NA	TRUE	NA	NA	NA	C	coding	117	354	719	1072	30.0	0	True	AATAAA	-19
PB.3945.2	chr15	+	2367	22	full-splice_match	MAP2K5	ENST00000178640.9	2347	22	-30	10	-30	0	multi-exon	FALSE	canonical	1	151059	junction_16	28253.437848811318	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	691	2004	25.0	-36	True	AATAAA	-20
PB.5733.4	chr19	+	3061	4	full-splice_match	ZNF440	ENST00000304060.9	4189	4	-4	1132	-4	-1132	multi-exon	FALSE	canonical	1	33676	junction_1	20060.422766122243	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	169	1956	30.0	-12	True	GATAAA	-23
PB.1988.1	chr11	-	3483	5	full-splice_match	AHNAK	ENST00000378024.8	18787	5	29	15275	-10	2804	multi-exon	FALSE	canonical	1	599498	junction_4	218560.43441846353	NA	0	NA	TRUE	NA	NA	NA	C	coding	1079	3237	247	3483	60.0	-1	True	NA	NA
PB.1551.6	chr10	+	3245	23	full-splice_match	HELLS	ENST00000394036.5	3131	23	-114	0	-8	0	multi-exon	FALSE	canonical	1	2404	junction_13	72032.69577750929	NA	1	NA	TRUE	NA	NA	NA	C	coding	884	2655	115	2769	30.0	-12	True	AATAAA	-17
PB.1551.5	chr10	+	3832	22	full-splice_match	HELLS	ENST00000348459.9	3099	22	-15	-718	12	718	multi-exon	FALSE	canonical	1	120448	junction_1	39804.41339686443	NA	1	1	TRUE	NA	NA	NA	C	coding	838	2517	121	2637	20.0	-18	True	AATAAA	-16
PB.1551.4	chr10	+	3188	22	novel_not_in_catalog	HELLS	novel	2740	20	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	2964	junction_2	58844.947070636685	NA	2	1	TRUE	NA	NA	NA	C	coding	753	2262	451	2712	30.0	-31	True	AATAAA	-17
PB.1551.3	chr10	+	3068	22	novel_in_catalog	HELLS	novel	2740	20	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	108097	junction_1	41250.97620371714	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	124	2592	30.0	-18	True	AATAAA	-17
PB.1551.2	chr10	+	2855	22	full-splice_match	HELLS	ENST00000348459.9	3099	22	-47	291	-20	-163	multi-exon	FALSE	canonical	1	120448	junction_1	39804.41339686443	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	153	2669	30.0	3	True	AATAGA	-45
PB.1551.1	chr10	+	2994	22	full-splice_match	HELLS	ENST00000348459.9	3099	22	-49	154	-22	-26	multi-exon	FALSE	canonical	1	120448	junction_1	39804.41339686443	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	155	2671	20.0	1	True	AGTAAA	-26
PB.7611.6	chr22	-	5054	11	novel_in_catalog	UFD1	novel	1814	12	NA	NA	6	0	intron_retention	FALSE	canonical	1	420926	junction_7	224723.30409781713	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	82	1029	25.0	16	True	AATAAA	-13
PB.7611.4	chr22	-	3210	12	novel_not_in_catalog	UFD1	novel	1814	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	12	junction_1	336336.97228344285	NA	5	1	TRUE	NA	NA	NA	C	coding	272	819	204	1022	25.0	-3	True	AATAAA	-13
PB.5454.14	chr18	+	4902	24	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	7196	junction_2	30617.970153573897	NA	0	NA	TRUE	NA	NA	NA	C	coding	1258	3777	601	4377	40.0	1	True	AATAAA	-15
PB.7611.2	chr22	-	3649	11	novel_in_catalog	UFD1	novel	1814	12	NA	NA	-5	1	intron_retention	FALSE	canonical	1	117665	junction_9	306790.6722230811	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	3037	3603	20.0	-10	True	AATAAA	-14
PB.7611.3	chr22	-	3655	11	novel_in_catalog	UFD1	novel	1814	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	309899	junction_1	257685.0563059488	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	3044	3610	25.0	9	True	AATAAA	-13
PB.1551.9	chr10	+	3066	22	novel_not_in_catalog	HELLS	novel	2740	20	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	988	junction_1	57434.69018473749	NA	4	1	TRUE	NA	NA	NA	C	coding	822	2469	122	2590	30.0	0	True	AATAAA	-17
PB.1551.8	chr10	+	2745	22	novel_in_catalog	HELLS	novel	2740	20	NA	NA	-3	-185	combination_of_known_junctions	FALSE	canonical	1	108097	junction_1	41250.97620371714	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	113	2581	55.0	-7	True	AATAGA	-23
PB.10277.1	chr6	-	3025	9	novel_not_in_catalog	NUP43	novel	3874	8	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	139	junction_1	105270.92077557553	NA	3	NA	TRUE	NA	NA	NA	C	coding	380	1143	40	1182	20.0	-13	True	AATAAA	-23
PB.10277.3	chr6	-	2367	9	novel_not_in_catalog	NUP43	novel	3874	8	NA	NA	-5	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	105313.4181965165	NA	3	NA	TRUE	NA	NA	NA	C	coding	380	1143	71	1213	20.0	-5	False	AATAAA	-23
PB.10277.2	chr6	-	2975	9	novel_not_in_catalog	NUP43	novel	3874	8	NA	NA	-3	-3	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	105313.4181965165	NA	3	1	TRUE	NA	NA	NA	C	coding	380	1143	44	1186	20.0	-17	True	AATAAA	-23
PB.10277.5	chr6	-	2839	9	novel_not_in_catalog	NUP43	novel	3874	8	NA	NA	1	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	105313.4181965165	NA	4	NA	TRUE	NA	NA	NA	C	coding	380	1143	65	1207	20.0	1	False	AATAAA	-22
PB.10277.4	chr6	-	2201	9	novel_not_in_catalog	NUP43	novel	3874	8	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	canonical	1	238	junction_1	105240.6546081854	NA	3	NA	TRUE	NA	NA	NA	C	coding	380	1143	43	1185	20.0	-16	True	AATAAA	-23
PB.10277.7	chr6	-	2575	8	full-splice_match	NUP43	ENST00000340413.6	3874	8	24	1275	4	1178	multi-exon	FALSE	canonical	1	215501	junction_1	42917.196656076296	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	54	1196	15.0	12	False	AATAAA	-15
PB.10277.6	chr6	-	2908	9	novel_not_in_catalog	NUP43	novel	3874	8	NA	NA	1	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	105313.4181965165	NA	1	NA	TRUE	NA	NA	NA	C	coding	380	1143	57	1199	30.0	9	False	AATAAA	-18
PB.10277.8	chr6	-	1688	8	full-splice_match	NUP43	ENST00000340413.6	3874	8	52	2134	8	319	multi-exon	FALSE	canonical	1	215501	junction_1	42917.196656076296	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	26	1168	55.0	1	True	AATAAA	-27
PB.10725.15	chr7	+	2658	7	incomplete-splice_match	PILRB	ENST00000438028.5	1822	9	18	993	18	0	3prime_fragment	FALSE	canonical	1	241947	junction_2	108999.71866999881	NA	0	NA	TRUE	NA	NA	NA	A	coding	162	489	145	633	95.0	-4243	False	NA	NA
PB.10725.14	chr7	+	2480	9	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-8	6115	intron_retention	FALSE	canonical	0	0	junction_3	181132.85103947186	NA	3	2	TRUE	NA	NA	NA	B	coding	148	447	1964	2410	95.0	3	True	NA	NA
PB.10725.11	chr7	+	4423	15	novel_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-9	15830	intron_retention	FALSE	canonical	1	143600	junction_4	223227.3457946757	NA	1	NA	TRUE	NA	NA	NA	B	coding	227	684	3387	4070	15.0	2	True	AATACA	-17
PB.10725.10	chr7	+	3131	17	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-10	15834	intron_retention	FALSE	non_canonical	0	0	junction_13	265623.99620066216	NA	3	NA	TRUE	NA	NA	NA	B	coding	227	684	2091	2774	10.0	1	True	AATACA	-21
PB.10725.13	chr7	+	3652	17	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-9	15833	intron_retention	FALSE	non_canonical	0	0	junction_13	269818.9712595512	NA	8	1	TRUE	NA	NA	NA	B	coding	227	684	2613	3296	5.0	2	True	AATACA	-20
PB.10725.12	chr7	+	3830	11	novel_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-9	6115	intron_retention	FALSE	canonical	1	99531	junction_9	156701.4058796219	NA	4	NA	TRUE	NA	NA	NA	B	coding	162	489	1957	2445	95.0	2	True	NA	NA
PB.7286.4	chr20	-	3878	13	novel_not_in_catalog	TGM2	novel	5070	13	NA	NA	11	-5	any annotated donor/acceptor	FALSE	canonical	1	8858	junction_8	381014.4748287404	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	74	2125	20.0	-2	True	AATAAA	-19
PB.7286.5	chr20	-	1749	10	full-splice_match	TGM2	ENST00000468262.5	1862	10	14	99	-9	-99	multi-exon	FALSE	canonical	1	928858	junction_9	216960.13292381848	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	71	1717	30.0	1	True	NA	NA
PB.7286.2	chr20	-	2572	12	novel_not_in_catalog	TGM2	novel	5070	13	NA	NA	-11	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	395596.2395728526	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	73	1896	20.0	-1	True	AATAAA	-21
PB.7286.3	chr20	-	3200	13	novel_not_in_catalog	TGM2	novel	5070	13	NA	NA	-12	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	381169.87755318463	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	97	2121	20.0	-25	True	AATAAA	-20
PB.7286.1	chr20	-	3891	13	full-splice_match	TGM2	ENST00000361475.6	5070	13	102	1077	-11	-3	multi-exon	FALSE	canonical	1	907516	junction_2	222217.71899065503	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	73	2136	20.0	-1	True	AATAAA	-21
PB.8243.1	chr3	+	1623	3	full-splice_match	C3orf38	ENST00000318887.7	2633	3	184	826	-60	198	multi-exon	FALSE	canonical	1	203727	junction_2	6064.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	127	1116	35.0	-10	True	ATTAAA	-21
PB.1444.1	chr10	+	2623	16	novel_in_catalog	SUPV3L1	novel	2484	15	NA	NA	5	8	combination_of_known_junctions	FALSE	canonical	1	9404	junction_1	125409.96683315617	NA	3	NA	TRUE	NA	NA	NA	C	coding	655	1968	584	2551	15.0	-30	True	AATAAA	-28
PB.1444.2	chr10	+	2399	14	novel_in_catalog	SUPV3L1	novel	2484	15	NA	NA	5	-2	no_combination_of_known_junctions	FALSE	canonical	1	3692	junction_6	122506.0697322005	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	965	2338	20.0	-30	True	AATAAA	-17
PB.1444.3	chr10	+	2341	15	full-splice_match	SUPV3L1	ENST00000359655.8	2484	15	5	138	5	-138	multi-exon	TRUE	canonical	1	130632	junction_1	98556.42117384812	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2286	56	2341	65.0	-30	True	AAAAAG	-27
PB.1444.4	chr10	+	2519	15	novel_in_catalog	SUPV3L1	novel	2484	15	NA	NA	-3	-7	no_combination_of_known_junctions	FALSE	canonical	1	3692	junction_7	142752.93707582873	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	1090	2463	20.0	-20	True	AATAAA	-12
PB.1444.5	chr10	+	3537	14	novel_in_catalog	SUPV3L1	novel	2484	15	NA	NA	3	-8	intron_retention	FALSE	canonical	1	130632	junction_1	100619.80288452523	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	40	1341	20.0	-14	True	AATAAA	-11
PB.1444.6	chr10	+	2441	15	full-splice_match	SUPV3L1	ENST00000359655.8	2484	15	43	0	-6	0	multi-exon	FALSE	canonical	1	130632	junction_1	98556.42117384812	NA	2	NA	TRUE	NA	NA	NA	C	coding	786	2361	18	2378	20.0	8	True	AATAAA	-19
PB.10942.6	chr7	-	3507	20	incomplete-splice_match	KMT2C	ENST00000355193.6	16858	59	21	89100	21	93	3prime_fragment	FALSE	canonical	1	1753	junction_2	84325.27484325552	NA	0	NA	TRUE	NA	NA	NA	B	coding	1103	3309	199	3507	35.0	3	True	NA	NA
PB.10942.7	chr7	-	2360	14	incomplete-splice_match	KMT2C	ENST00000355193.6	16858	59	24	113340	24	-24147	3prime_fragment	FALSE	canonical	1	27476	junction_7	84021.44953282841	NA	1	NA	TRUE	NA	NA	NA	B	coding	721	2163	196	2358	70.0	6	True	NA	NA
PB.10942.4	chr7	-	4106	27	novel_not_in_catalog	KMT2C	novel	16862	59	NA	NA	-681	17062	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	88634.81773383448	NA	5	1	TRUE	NA	NA	NA	B	coding	1348	4044	61	4104	60.0	-135	False	AATAAA	-13
PB.10942.1	chr7	-	11027	43	incomplete-splice_match	KMT2C	ENST00000355193.6	16858	59	-2	27842	-2	-9872	3prime_fragment	FALSE	canonical	1	1753	junction_25	70680.28732384586	NA	1	NA	TRUE	NA	NA	NA	B	coding	3602	10806	222	11027	80.0	-20	True	NA	NA
PB.1545.1	chr10	-	6826	53	novel_not_in_catalog	MYOF	novel	4812	34	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	174685.86951336122	NA	1	1	TRUE	NA	NA	NA	A	coding	1443	4332	114	4445	15.0	-14	True	AATAAA	-15
PB.8291.3	chr3	+	1746	1	novel_in_catalog	C3orf52	novel	2054	4	NA	NA	5009	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	115	348	189	536	10.0	NA	False	AATACA	-15
PB.8017.2	chr3	-	1681	12	full-splice_match	ACAA1	ENST00000333167.12	1785	12	103	1	-9	0	multi-exon	FALSE	canonical	1	450286	junction_11	190469.5668870719	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	71	1345	5.0	-29	True	AGTAAA	-19
PB.8291.1	chr3	+	2287	6	full-splice_match	C3orf52	ENST00000264848.9	2277	6	-11	1	3	-1	multi-exon	FALSE	canonical	1	48995	junction_3	4400.085999159562	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	71	724	10.0	-6996	False	AATACA	-16
PB.1051.65	chr1	+	3005	6	novel_not_in_catalog	ZC3H11A	novel	1892	13	NA	NA	-2889	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	272981.440351977	NA	3	1	TRUE	NA	NA	NA	C	coding	344	1035	253	1287	25.0	NA	False	AATAAA	-11
PB.1335.1	chr10	+	2160	3	antisense	novelGene_AL355798.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3167	junction_2	476.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.6674.3	chr2	-	1406	6	full-splice_match	FHL2	ENST00000408995.5	1367	6	-6	-33	-5	0	multi-exon	FALSE	canonical	1	125077	junction_5	341932.54687929316	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	112	951	30.0	-6	True	AATAAA	-15
PB.6799.14	chr2	+	3430	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	1	36340	junction_8	259197.00289162295	NA	1	NA	TRUE	NA	NA	NA	C	coding	691	2076	129	2204	15.0	-13	True	AATAAA	-21
PB.807.9	chr1	-	2627	10	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28529	-44723	no_combination_of_known_junctions	FALSE	canonical	1	11591	junction_1	283027.601259037	NA	0	NA	TRUE	NA	NA	NA	B	coding	719	2160	260	2419	20.0	-1	True	NA	NA
PB.807.8	chr1	-	2668	11	full-splice_match	YY1AP1	ENST00000404643.5	2654	11	-16	2	1	-2	multi-exon	FALSE	canonical	1	11591	junction_1	248699.82298403428	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	267	2459	20.0	0	True	NA	NA
PB.7340.2	chr20	+	3506	22	incomplete-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-183	41893	-183	-3646	3prime_fragment	FALSE	canonical	1	114682	junction_1	42338.277578700174	NA	1	NA	TRUE	NA	NA	NA	C	coding	1055	3168	184	3351	20.0	-21	True	ATTAAA	-32
PB.807.1	chr1	-	3124	10	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28526	-44717	intron_retention	FALSE	canonical	1	147529	junction_1	219335.73883185015	NA	9	NA	TRUE	NA	NA	NA	B	coding	357	1074	265	1338	20.0	2	True	NA	NA
PB.807.3	chr1	-	2705	11	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28424	-44721	no_combination_of_known_junctions	FALSE	canonical	1	11591	junction_1	268449.86288104154	NA	0	NA	TRUE	NA	NA	NA	B	coding	750	2253	243	2495	20.0	17	True	NA	NA
PB.807.2	chr1	-	2768	11	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28528	-44721	no_combination_of_known_junctions	FALSE	canonical	1	11591	junction_1	273243.92115683015	NA	0	NA	TRUE	NA	NA	NA	B	coding	535	1608	951	2558	20.0	0	True	NA	NA
PB.807.4	chr1	-	2695	10	full-splice_match	YY1AP1	ENST00000359205.9	2690	10	-6	1	-6	-1	multi-exon	FALSE	canonical	1	11591	junction_1	282585.14932413417	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	266	2485	20.0	-7	True	NA	NA
PB.8261.1	chr3	+	2452	4	full-splice_match	COL8A1	ENST00000273342.8	3029	4	-22	599	-22	-599	multi-exon	FALSE	canonical	1	189324	junction_1	25257.864258263977	NA	0	NA	TRUE	NA	NA	NA	A	coding	744	2232	220	2451	90.0	-20	False	NA	NA
PB.6674.4	chr2	-	1530	6	full-splice_match	FHL2	ENST00000393353.7	1531	6	-2	3	-2	-1	multi-exon	FALSE	canonical	1	199649	junction_5	313378.01951406867	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	237	1076	25.0	-3	True	AATAAA	-14
PB.7886.1	chr22	-	3949	9	incomplete-splice_match	DENND6B	ENST00000413817.7	4939	20	12506	1	4413	-1	5prime_fragment	FALSE	canonical	1	177807	junction_8	40301.63999900469	NA	2	NA	TRUE	NA	NA	NA	A	coding	230	693	149	841	5.0	4	True	ATTAAA	-19
PB.8285.1	chr3	+	2605	3	novel_not_in_catalog	LINC01215	novel	2592	3	NA	NA	-777	2	any annotated donor/acceptor	FALSE	canonical	1	26419	junction_1	15331.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-4	True	AATAAA	-19
PB.8285.2	chr3	+	3564	2	novel_not_in_catalog	LINC01215	novel	2592	3	NA	NA	-773	2	intron_retention	FALSE	canonical	1	26419	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	B	coding	123	372	623	994	20.0	0	True	AATAAA	-19
PB.8285.3	chr3	+	2567	1	genic	LINC01215	novel	NA	NA	NA	NA	-771	-10994	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	-6367	False	AGTAAA	-10
PB.10938.1	chr7	-	2041	8	full-splice_match	RHEB	ENST00000262187.9	2075	8	32	2	32	-2	multi-exon	FALSE	canonical	1	1353	junction_4	94183.66421118313	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	382	936	40.0	2	True	AATAAA	-17
PB.2319.1	chr11	+	2297	11	novel_not_in_catalog	HINFP	novel	3163	10	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	24729	junction_2	69071.71436449222	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	188	1741	20.0	0	True	AATAAA	-19
PB.2319.2	chr11	+	2813	10	novel_in_catalog	HINFP	novel	3163	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	27820	junction_5	75882.05223605616	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1446	2258	20.0	1	True	AATAAA	-18
PB.2319.3	chr11	+	2169	10	full-splice_match	HINFP	ENST00000350777.6	3163	10	4	990	0	0	multi-exon	FALSE	canonical	1	76319	junction_1	45923.815824434096	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	60	1613	20.0	11	True	AATAAA	-19
PB.10314.4	chr6	+	1489	9	full-splice_match	ACAT2	ENST00000367048.4	3180	9	1703	-12	-464	12	multi-exon	FALSE	canonical	1	1053057	junction_1	132094.51861823932	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	58	1251	35.0	-35	True	AATAAA	-36
PB.11466.19	chr9	-	1040	9	incomplete-splice_match	PSIP1	ENST00000380733.8	3391	16	51	10054	21	-2039	3prime_fragment	FALSE	canonical	1	83844	junction_8	206801.31537476828	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	747	294	1040	65.0	1	True	AAGAAA	-11
PB.1659.1	chr10	+	2460	7	full-splice_match	CASP7	ENST00000621345.4	2467	7	3	4	3	0	multi-exon	FALSE	canonical	1	49434	junction_1	80422.1804778107	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	186	1097	20.0	-29	True	ATTAAA	-21
PB.1659.2	chr10	+	2490	8	full-splice_match	CASP7	ENST00000369315.5	2421	8	-65	-4	-2	0	multi-exon	FALSE	canonical	1	8970	junction_1	112759.67346366632	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	113	1123	10.0	-11	True	ATTAAA	-25
PB.1659.3	chr10	+	2813	7	novel_not_in_catalog	CASP7	novel	2467	7	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	2177	junction_1	97776.28995313741	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	540	1451	20.0	-1	True	ATTAAA	-20
PB.1659.4	chr10	+	2264	7	novel_in_catalog	CASP7	novel	2467	7	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	2905	junction_5	97626.24543024051	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	94	897	10.0	0	True	ATTAAA	-25
PB.1659.5	chr10	+	2379	7	full-splice_match	CASP7	ENST00000369321.6	2620	7	236	5	28	-1	multi-exon	FALSE	canonical	1	2313	junction_2	93800.46567581635	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	82	1017	20.0	-7	True	ATTAAA	-20
PB.1659.6	chr10	+	2344	7	full-splice_match	CASP7	ENST00000369318.7	2377	7	32	1	-31	-1	multi-exon	FALSE	canonical	1	156572	junction_1	41882.0662485747	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	71	982	20.0	-3	True	ATTAAA	-20
PB.1659.7	chr10	+	2474	8	novel_not_in_catalog	CASP7	novel	2467	7	NA	NA	-28	1	any annotated donor/acceptor	FALSE	canonical	1	446	junction_3	110879.5422718193	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	331	1110	15.0	0	True	ATTAAA	-22
PB.1659.8	chr10	+	3107	6	novel_in_catalog	CASP7	novel	2467	7	NA	NA	-26	0	intron_retention	FALSE	canonical	1	156572	junction_1	45084.87647803862	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	66	647	20.0	2	True	ATTAAA	-21
PB.10736.3	chr7	+	2960	7	novel_in_catalog	TRIP6	novel	1942	9	NA	NA	-40	1	intron_retention	FALSE	canonical	1	395477	junction_2	218822.61438237797	NA	2	NA	TRUE	NA	NA	NA	C	coding	356	1071	152	1222	15.0	-8221	False	AAGAAA	-28
PB.10736.2	chr7	+	2158	8	incomplete-splice_match	TRIP6	ENST00000200457.8	1942	9	205	6	-44	-5	intron_retention	FALSE	canonical	1	395477	junction_2	248183.87271751004	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	156	1496	35.0	-8225	False	AAGAAA	-21
PB.10736.5	chr7	+	2487	8	novel_in_catalog	TRIP6	novel	1942	9	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	395477	junction_2	252870.28701672002	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	113	1183	35.0	-20	True	AAGAAA	-21
PB.10736.4	chr7	+	2891	6	novel_in_catalog	TRIP6	novel	1942	9	NA	NA	-32	-5	intron_retention	FALSE	canonical	1	667759	junction_2	201713.87496292862	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	2198	2746	35.0	-8213	False	AAGAAA	-21
PB.10736.7	chr7	+	2060	7	novel_in_catalog	TRIP6	novel	1942	9	NA	NA	0	-5	intron_retention	FALSE	canonical	1	667759	junction_2	203609.06447194068	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	1283	1915	35.0	-19	True	AAGAAA	-21
PB.10736.6	chr7	+	2455	8	novel_in_catalog	TRIP6	novel	1942	9	NA	NA	-19	-5	intron_retention	TRUE	canonical	1	9477	junction_1	365163.4632131708	NA	2	NA	TRUE	NA	NA	NA	C	coding	90	273	879	1151	35.0	-8200	False	AAGAAA	-21
PB.1513.11	chr10	+	5071	10	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	3394	junction_9	45802.26582567103	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	115	2790	25.0	-10	True	AATAAA	-15
PB.1513.10	chr10	+	3518	10	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	129	junction_3	49081.07751918701	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	60	2738	25.0	-10	True	AATAAA	-15
PB.1513.13	chr10	+	3880	11	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	5167	junction_2	47885.821888007726	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	386	3100	25.0	0	True	AATAAA	-15
PB.1513.12	chr10	+	1974	6	incomplete-splice_match	SHLD2	ENST00000298784.5	3402	9	0	20592	0	19237	3prime_fragment	FALSE	canonical	1	41170	junction_4	35954.8178724354	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1860	115	1974	50.0	-10	True	NA	NA
PB.1513.15	chr10	+	3736	11	novel_not_in_catalog	SHLD2	novel	969	3	NA	NA	17	0	any annotated donor/acceptor	FALSE	canonical	1	6109	junction_3	48186.67810878853	NA	7	1	TRUE	NA	NA	NA	C	coding	952	2859	98	2956	25.0	7	True	AATAAA	-15
PB.1513.14	chr10	+	3392	9	full-splice_match	SHLD2	ENST00000298784.5	3402	9	11	-1	11	1	multi-exon	FALSE	canonical	1	41170	junction_4	31896.970704274958	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	104	2611	20.0	1	True	AATAAA	-16
PB.7890.6	chr22	-	2579	14	novel_not_in_catalog	LMF2	novel	2582	14	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	13536	junction_3	210304.56007149228	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	31	2109	0.0	-12	True	AATAAA	-20
PB.7890.9	chr22	-	2348	13	novel_not_in_catalog	LMF2	novel	2582	14	NA	NA	-16	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	200252.8638590296	NA	2	1	TRUE	NA	NA	NA	C	coding	529	1590	319	1908	0.0	-14	True	AATAAA	-18
PB.3055.1	chr13	-	5817	9	novel_in_catalog	SACS	novel	15134	8	NA	NA	36	-9362	combination_of_known_junctions	FALSE	canonical	1	43728	junction_8	36634.59489249881	NA	0	NA	TRUE	NA	NA	NA	B	coding	1890	5670	146	5815	55.0	0	True	AAAACA	-42
PB.3055.2	chr13	-	5255	9	novel_in_catalog	SACS	novel	15134	8	NA	NA	52	-9908	combination_of_known_junctions	FALSE	canonical	1	43728	junction_8	36634.59489249881	NA	16	NA	TRUE	NA	NA	NA	B	coding	1708	5124	130	5253	65.0	16	True	NA	NA
PB.3055.3	chr13	-	2751	9	novel_in_catalog	SACS	novel	15134	8	NA	NA	36	-12428	combination_of_known_junctions	FALSE	canonical	1	43728	junction_8	36634.59489249881	NA	0	NA	TRUE	NA	NA	NA	B	coding	868	2604	146	2749	25.0	0	True	ATTAAA	-21
PB.3055.4	chr13	-	2420	8	novel_in_catalog	SACS	novel	15134	8	NA	NA	-8	6	combination_of_known_junctions	FALSE	canonical	1	43728	junction_7	38772.69691682643	NA	0	NA	TRUE	NA	NA	NA	B	coding	729	2190	190	2379	30.0	-1	True	AATAAA	-26
PB.3055.5	chr13	-	2803	7	novel_in_catalog	SACS	novel	15134	8	NA	NA	28	-217	combination_of_known_junctions	FALSE	canonical	1	43728	junction_6	41874.47643752297	NA	0	NA	TRUE	NA	NA	NA	B	coding	695	2088	154	2241	30.0	-8	True	AATAAA	-22
PB.9845.17	chr6	+	2175	6	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	any annotated donor/acceptor	FALSE	canonical	1	827	junction_5	2293617.3638342903	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	21	1085	15.0	0	True	AATAAA	-18
PB.9845.16	chr6	+	2194	6	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	2293914.7041210053	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	21	1085	15.0	0	True	AATAAA	-18
PB.6195.2	chr19	-	4550	4	novel_in_catalog	ZNF347	novel	496	4	NA	NA	-2	-104	intron_retention	FALSE	canonical	1	9665	junction_3	13054.005166572017	NA	1	NA	TRUE	NA	NA	NA	C	coding	781	2346	706	3051	60.0	-10	True	NA	NA
PB.11466.17	chr9	-	2750	10	incomplete-splice_match	PSIP1	ENST00000380738.8	3364	16	-16	7126	8	-202	3prime_fragment	FALSE	canonical	1	122085	junction_2	204754.55248632826	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	334	1314	30.0	148	False	AATAAA	-12
PB.10187.5	chr6	-	4002	6	novel_not_in_catalog	CEP85L	novel	7673	13	NA	NA	228	-11385	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	36925.63305672633	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	361	1620	35.0	-4	True	ATTAAA	-13
PB.11734.5	chr9	+	1672	5	full-splice_match	SLC31A1	ENST00000374212.4	4744	5	-16	3088	-16	-3088	multi-exon	FALSE	canonical	1	119935	junction_4	61334.579604412385	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	169	741	20.0	-42	True	AATACA	-14
PB.10187.4	chr6	-	2064	8	incomplete-splice_match	CEP85L	ENST00000368491.7	7673	13	265	21045	231	-14	3prime_fragment	FALSE	canonical	1	36899	junction_7	19179.897227917292	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1707	358	2064	65.0	-1	True	GATAAA	-22
PB.11734.6	chr9	+	4413	5	full-splice_match	SLC31A1	ENST00000374212.4	4744	5	-10	341	-10	-341	multi-exon	FALSE	canonical	1	119935	junction_4	61334.579604412385	NA	2	NA	TRUE	NA	NA	NA	C	coding	190	573	163	735	60.0	-36	True	NA	NA
PB.1645.7	chr10	+	2311	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-17	128	any annotated donor/acceptor	FALSE	canonical	1	9438	junction_1	389365.29915409774	NA	3	1	TRUE	NA	NA	NA	C	coding	192	579	86	664	20.0	0	True	AATAAA	-22
PB.1645.6	chr10	+	2176	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-24	-14	any annotated donor/acceptor	FALSE	canonical	1	9438	junction_1	389365.29915409774	NA	2	1	TRUE	NA	NA	NA	C	coding	192	579	93	671	75.0	-7	True	TTTAAA	-25
PB.1645.5	chr10	+	2149	5	novel_in_catalog	MXI1	novel	3470	6	NA	NA	-40	-15	combination_of_known_junctions	FALSE	canonical	1	5858	junction_1	483952.82619822567	NA	4	NA	TRUE	NA	NA	NA	C	coding	182	549	97	645	70.0	-23	True	TTTAAA	-24
PB.1645.4	chr10	+	2250	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-52	93	any annotated donor/acceptor	FALSE	canonical	1	1062	junction_1	391891.47328034585	NA	3	NA	TRUE	NA	NA	NA	C	coding	192	579	60	638	75.0	-8851	False	NA	NA
PB.1645.3	chr10	+	2517	6	full-splice_match	MXI1	ENST00000239007.11	2424	6	34	-127	-8	127	multi-exon	FALSE	canonical	1	187311	junction_1	339108.66989011056	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	185	871	20.0	2	True	AATAAA	-21
PB.1645.2	chr10	+	2235	6	full-splice_match	MXI1	ENST00000239007.11	2424	6	175	14	84	-14	multi-exon	FALSE	canonical	1	187311	junction_1	339108.66989011056	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	44	730	75.0	-9997	False	TTTAAA	-25
PB.1645.1	chr10	+	2356	6	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	-785	128	any annotated donor/acceptor	FALSE	canonical	1	2404	junction_1	391485.89813325333	NA	21	1	TRUE	NA	NA	NA	C	coding	192	579	131	709	20.0	-2917	False	AATAAA	-22
PB.4106.3	chr15	-	2777	3	novel_not_in_catalog	LYSMD4	novel	2356	3	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	199	junction_1	3541.0	NA	10	NA	TRUE	NA	NA	NA	C	coding	137	414	109	522	25.0	46	True	AATAAA	-20
PB.7127.20	chr20	-	2747	14	full-splice_match	CSNK2A1	ENST00000217244.8	4390	14	72	1571	-1	15	multi-exon	FALSE	canonical	1	76	junction_11	76517.77907915977	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	307	1482	30.0	7	True	AATAAA	-19
PB.7127.23	chr20	-	2575	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	39	10298	-4	-14	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	235	1410	15.0	-7	True	TATAAA	-22
PB.10704.9	chr7	+	3812	6	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	30	-328	combination_of_known_junctions	FALSE	canonical	1	17640	junction_1	34493.519289280994	NA	11	NA	TRUE	NA	NA	NA	C	coding	535	1608	998	2605	20.0	-10	True	NA	NA
PB.7127.25	chr20	-	1572	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	45	11295	0	-2	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	229	1404	5.0	-1	True	CATAAA	-20
PB.7127.24	chr20	-	2296	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	58	10558	4	-134	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	216	1391	55.0	12	True	NA	NA
PB.1645.9	chr10	+	3079	6	full-splice_match	MXI1	ENST00000485566.1	2755	6	-197	-127	80	127	multi-exon	FALSE	canonical	1	2955	junction_3	440688.47863741574	NA	2	NA	TRUE	NA	NA	NA	C	coding	70	213	222	434	20.0	-8719	False	AATAAA	-21
PB.1645.8	chr10	+	2457	7	novel_not_in_catalog	MXI1	novel	3470	6	NA	NA	50	128	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	433929.0390190544	NA	6	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8749	False	AATAAA	-22
PB.7363.9	chr20	-	5906	6	novel_not_in_catalog	ZNF217	novel	5796	6	NA	NA	1075	-1	any annotated donor/acceptor	FALSE	canonical	1	4627	junction_5	124019.71008932411	NA	1	NA	TRUE	NA	NA	NA	C	coding	1040	3123	570	3692	20.0	4937	False	AATATA	-15
PB.11734.2	chr9	+	1539	5	full-splice_match	SLC31A1	ENST00000374212.4	4744	5	-25	3230	-25	-3230	multi-exon	FALSE	canonical	1	119935	junction_4	61334.579604412385	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	178	750	75.0	-51	True	NA	NA
PB.7363.1	chr20	-	5882	6	novel_not_in_catalog	ZNF217	novel	5796	6	NA	NA	-438	-1	any annotated donor/acceptor	FALSE	canonical	1	29162	junction_5	115133.14585400678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1040	3123	538	3660	15.0	3424	False	AATATA	-23
PB.7363.2	chr20	-	5662	5	novel_in_catalog	ZNF217	novel	5796	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	67683	junction_1	126566.64192629905	NA	0	NA	TRUE	NA	NA	NA	C	coding	1053	3162	451	3612	15.0	-1	True	AATATA	-23
PB.7363.3	chr20	-	5786	5	novel_not_in_catalog	ZNF217	novel	5796	6	NA	NA	-476	-2	any annotated donor/acceptor	FALSE	canonical	1	29162	junction_4	144669.40647299966	NA	2	NA	TRUE	NA	NA	NA	C	coding	1053	3162	576	3737	15.0	3386	False	AATATA	-22
PB.7363.5	chr20	-	5784	6	full-splice_match	ZNF217	ENST00000371471.6	5796	6	4	8	4	0	multi-exon	FALSE	canonical	1	105356	junction_5	88789.80245861571	NA	3	NA	TRUE	NA	NA	NA	C	coding	1040	3123	447	3569	20.0	3	True	AATATA	-16
PB.45.1	chr1	-	5515	23	novel_not_in_catalog	CEP104	novel	6424	22	NA	NA	3	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	80401.00639418855	NA	2	1	TRUE	NA	NA	NA	C	coding	876	2631	485	3115	25.0	-1	True	AATAAA	-10
PB.45.2	chr1	-	3729	22	full-splice_match	CEP104	ENST00000378230.7	6424	22	-33	2728	-18	430	multi-exon	FALSE	canonical	1	83984	junction_21	69130.60985169391	NA	1	NA	TRUE	NA	NA	NA	C	coding	876	2631	506	3136	65.0	153	False	NA	NA
PB.45.3	chr1	-	2551	16	novel_not_in_catalog	CEP104	novel	6424	22	NA	NA	-9	349	any annotated donor/acceptor	FALSE	canonical	1	2251	junction_15	97185.03112891866	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2181	370	2550	80.0	-13	True	NA	NA
PB.3227.11	chr13	-	1541	10	full-splice_match	UGGT2	ENST00000397618.7	1547	10	5	1	-2	-1	multi-exon	FALSE	canonical	1	41962	junction_1	35746.744125587815	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	84	1202	40.0	-1	True	AATAAA	-15
PB.3227.10	chr13	-	2136	17	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-12	135268	-2	46675	3prime_fragment	FALSE	canonical	1	66236	junction_2	31254.020931063813	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	84	2078	45.0	-1	True	ATTAAA	-17
PB.45.6	chr1	-	2230	14	novel_in_catalog	CEP104	novel	6424	22	NA	NA	-14	349	no_combination_of_known_junctions	FALSE	canonical	1	11269	junction_5	94610.02345486538	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1728	502	2229	80.0	-18	True	NA	NA
PB.3227.12	chr13	-	1937	8	full-splice_match	UGGT2	ENST00000376712.4	2240	8	-6	309	1	-309	multi-exon	FALSE	canonical	1	11871	junction_1	49618.54252685982	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	88	930	20.0	-5	True	AATAAA	-17
PB.4408.3	chr16	+	2151	12	full-splice_match	GPT2	ENST00000340124.8	3984	12	-31	1864	-31	426	multi-exon	FALSE	canonical	1	119642	junction_1	118615.20334138877	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	144	1715	25.0	-37	True	AATAAA	-16
PB.4408.2	chr16	+	4007	12	full-splice_match	GPT2	ENST00000340124.8	3984	12	-32	9	-32	0	multi-exon	FALSE	canonical	1	119642	junction_1	118615.20334138877	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	145	1716	20.0	-38	True	AATAAA	-16
PB.4408.1	chr16	+	4122	13	novel_in_catalog	GPT2	novel	3984	12	NA	NA	-36	0	no_combination_of_known_junctions	FALSE	canonical	1	10472	junction_2	176386.4522700361	NA	15	2	TRUE	NA	NA	NA	C	coding	423	1272	560	1831	20.0	-42	True	AATAAA	-16
PB.6338.30	chr2	-	4890	20	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	-5	72	any annotated donor/acceptor	FALSE	canonical	1	1688	junction_19	250289.58484173747	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	581	3097	25.0	-6	True	GATAAA	-13
PB.4549.15	chr16	-	2743	2	full-splice_match	RFWD3	ENST00000571776.1	936	2	8	-1815	-2	1815	multi-exon	FALSE	canonical	1	73745	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	79	600	90.0	-3	True	NA	NA
PB.4549.14	chr16	-	2897	3	full-splice_match	RFWD3	ENST00000575397.5	841	3	-61	-1995	-12	1815	multi-exon	FALSE	canonical	1	28731	junction_1	18082.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	233	754	90.0	-35	True	NA	NA
PB.4549.13	chr16	-	2359	3	incomplete-splice_match	RFWD3	ENST00000361070.8	4957	13	12	28974	0	-5748	3prime_fragment	FALSE	canonical	1	73745	junction_2	83610.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	87	860	70.0	-11	True	NA	NA
PB.4549.12	chr16	-	2487	4	incomplete-splice_match	RFWD3	ENST00000571750.5	3033	14	-5	26939	-1	-5748	3prime_fragment	FALSE	canonical	1	28731	junction_2	92707.57331523676	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	215	988	70.0	-17	True	NA	NA
PB.4549.11	chr16	-	3465	13	full-splice_match	RFWD3	ENST00000361070.8	4957	13	-22	1514	-22	521	multi-exon	FALSE	canonical	1	73745	junction_12	70780.77538482034	NA	1	NA	TRUE	NA	NA	NA	C	coding	774	2325	121	2445	15.0	-45	True	AATAAA	-18
PB.4549.10	chr16	-	4413	13	full-splice_match	RFWD3	ENST00000361070.8	4957	13	7	537	0	-537	multi-exon	FALSE	canonical	1	73745	junction_12	70780.77538482034	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	92	2416	50.0	-16	True	NA	NA
PB.223.1	chr1	+	2457	2	full-splice_match	ATP5IF1	ENST00000465645.1	1855	2	-30	-572	-9	565	multi-exon	FALSE	canonical	1	4021058	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.11194.1	chr8	+	4560	12	novel_in_catalog	HNF4G	novel	470	5	NA	NA	-320	-20	no_combination_of_known_junctions	FALSE	canonical	1	1607	junction_3	10604.033176263916	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	607	1833	70.0	-62	False	AATAAA	-7
PB.11194.2	chr8	+	4472	12	novel_in_catalog	HNF4G	novel	470	5	NA	NA	-291	-19	combination_of_known_junctions	FALSE	canonical	1	3848	junction_1	9509.422521594826	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	518	1744	70.0	-7	True	AATAAA	-8
PB.6338.33	chr2	-	5200	21	full-splice_match	PUM2	ENST00000403432.5	3594	21	-142	-1464	6	18	multi-exon	FALSE	canonical	1	242233	junction_9	196833.014489408	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	267	3461	40.0	-11	True	ATTAAA	-35
PB.11194.4	chr8	+	4185	11	novel_in_catalog	HNF4G	novel	470	5	NA	NA	-36	-19	combination_of_known_junctions	FALSE	canonical	1	11172	junction_1	7134.320983106942	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	231	1457	70.0	222	False	AATAAA	-8
PB.8448.1	chr3	+	2705	26	incomplete-splice_match	U2SURP	ENST00000473835.6	7276	28	79	6832	-3	-68	3prime_fragment	FALSE	canonical	1	338381	junction_23	171556.1740083335	NA	4	NA	TRUE	NA	NA	NA	C	coding	898	2694	12	2705	70.0	16	True	NA	NA
PB.6666.1	chr2	+	5010	12	novel_in_catalog	IL1R1	novel	609	5	NA	NA	201	-1	combination_of_known_junctions	TRUE	canonical	1	45150	junction_1	61950.78193264485	NA	0	NA	TRUE	NA	NA	NA	A	coding	569	1710	187	1896	20.0	-7	False	AATAAA	-22
PB.8413.6	chr3	+	1903	13	full-splice_match	CEP63	ENST00000383229.7	2028	13	125	0	-23	0	multi-exon	FALSE	canonical	1	49185	junction_1	97972.75038740222	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	47	1672	30.0	-48	True	AATAAA	-13
PB.8448.7	chr3	+	2689	25	incomplete-splice_match	U2SURP	ENST00000473835.6	7276	28	57	9496	-14	-2732	3prime_fragment	FALSE	canonical	1	338381	junction_23	167907.98280355736	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2655	34	2688	50.0	-6	True	GATAAA	-14
PB.7054.9	chr2	-	2025	16	full-splice_match	SP110	ENST00000540870.5	2032	16	66	-59	66	-25	multi-exon	FALSE	canonical	1	15456	junction_14	146533.43171370673	NA	1	1	TRUE	NA	NA	NA	C	coding	555	1668	193	1860	75.0	1785	False	AAAACA	-45
PB.8448.6	chr3	+	7226	28	full-splice_match	U2SURP	ENST00000473835.6	7276	28	53	-3	-18	3	multi-exon	FALSE	canonical	1	338381	junction_23	180839.80833210156	NA	2	1	TRUE	NA	NA	NA	C	coding	1029	3090	38	3127	25.0	-10	True	AATAAA	-26
PB.755.3	chr1	-	1774	6	novel_in_catalog	MRPL9	novel	1296	7	NA	NA	0	-2	intron_retention	FALSE	canonical	1	601027	junction_5	182869.06199507887	NA	2	NA	TRUE	NA	NA	NA	C	coding	180	543	18	560	25.0	-1	True	AATAAA	-18
PB.755.2	chr1	-	2488	4	novel_in_catalog	MRPL9	novel	1296	7	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	601027	junction_3	221262.19924233685	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	23	394	25.0	-6	True	AATAAA	-18
PB.755.1	chr1	-	1226	7	full-splice_match	MRPL9	ENST00000368830.7	1296	7	68	2	0	-2	multi-exon	FALSE	canonical	1	601027	junction_6	191526.2775214467	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	18	821	15.0	-1	True	AATAAA	-22
PB.4713.1	chr17	+	1970	4	novel_not_in_catalog	TXNDC17	novel	2219	4	NA	NA	10	61	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	636361.7764170525	NA	7	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-65	False	AATAAA	-26
PB.4713.2	chr17	+	2027	4	full-splice_match	TXNDC17	ENST00000250101.9	2219	4	247	-55	-11	55	multi-exon	FALSE	canonical	1	1316105	junction_3	292304.8702342585	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	79	450	20.0	-55	False	AATAAA	-20
PB.755.4	chr1	-	1718	6	novel_in_catalog	MRPL9	novel	1296	7	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	601027	junction_5	204267.02020835376	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	25	396	25.0	-8	True	AATAAA	-18
PB.6338.32	chr2	-	5088	21	novel_in_catalog	PUM2	novel	6112	20	NA	NA	8	20	combination_of_known_junctions	FALSE	canonical	1	51244	junction_19	238799.7020406171	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	558	3347	45.0	-9	True	ATTAAA	-37
PB.5656.5	chr19	+	2072	13	novel_in_catalog	TRIP10	novel	2249	14	NA	NA	-14	-16	intron_retention	FALSE	canonical	1	296317	junction_1	130887.56641831843	NA	3	NA	TRUE	NA	NA	NA	C	coding	283	852	63	914	80.0	20	True	NA	NA
PB.5656.4	chr19	+	2791	14	novel_not_in_catalog	TRIP10	novel	2249	14	NA	NA	-14	-15	intron_retention	FALSE	canonical	1	21104	junction_9	197028.87279676076	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	63	1067	80.0	20	True	NA	NA
PB.5656.3	chr19	+	3354	14	novel_not_in_catalog	TRIP10	novel	2249	14	NA	NA	-14	2185	any annotated donor/acceptor	FALSE	canonical	1	11	junction_13	199431.5639985291	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	63	1622	25.0	20	True	GGGGCT	-35
PB.5656.2	chr19	+	1973	14	full-splice_match	TRIP10	ENST00000313285.12	2035	14	20	42	-14	-16	multi-exon	FALSE	canonical	1	296317	junction_1	125775.90847560558	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	63	1700	80.0	20	True	NA	NA
PB.5656.1	chr19	+	2093	13	novel_in_catalog	TRIP10	novel	2249	14	NA	NA	-1	-16	intron_retention	FALSE	canonical	1	296317	junction_1	130853.36362349779	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	507	1820	80.0	-1	True	NA	NA
PB.172.16	chr1	-	5137	6	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-16	-6	intron_retention	FALSE	canonical	1	316270	junction_1	277609.5050897213	NA	4	NA	TRUE	NA	NA	NA	C	coding	114	345	3681	4025	30.0	-19	True	AATAAA	-17
PB.172.17	chr1	-	3663	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-14	155	combination_of_known_junctions	FALSE	canonical	1	34002	junction_4	249941.24037222337	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	3222	3563	30.0	-17	True	NA	NA
PB.172.14	chr1	-	2320	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-27	-4	combination_of_known_junctions	FALSE	canonical	1	93663	junction_4	305741.3341473838	NA	1	1	TRUE	NA	NA	NA	C	coding	114	345	862	1206	30.0	-30	False	AATAAA	-19
PB.172.15	chr1	-	1948	7	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	365539.70120300655	NA	1	1	TRUE	NA	NA	NA	C	coding	178	537	198	734	30.0	-8	True	AATAAA	-19
PB.172.12	chr1	-	4662	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	34002	junction_4	318713.23261746165	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	3204	3548	30.0	1	True	AATAAA	-19
PB.172.13	chr1	-	5554	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	1	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	341092.86760728376	NA	4	1	TRUE	NA	NA	NA	C	coding	223	672	190	861	30.0	0	True	AATAAA	-19
PB.172.10	chr1	-	1852	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	351138.7500771739	NA	1	1	TRUE	NA	NA	NA	C	coding	144	435	203	637	25.0	14	False	AATAAA	-20
PB.172.11	chr1	-	1829	5	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-14	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	346794.41511821887	NA	1	1	TRUE	NA	NA	NA	C	coding	126	381	234	614	25.0	-17	True	AATAAA	-20
PB.11918.4	chr9	+	2573	14	novel_not_in_catalog	MAN1B1	novel	2769	13	NA	NA	-21	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	161667.55525057655	NA	8	1	TRUE	NA	NA	NA	C	coding	699	2100	37	2136	15.0	-21	True	GATAAA	-15
PB.11918.5	chr9	+	2582	13	novel_in_catalog	MAN1B1	novel	2769	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	5760	junction_12	154240.88742745784	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	36	2426	15.0	-20	True	GATAAA	-15
PB.11918.6	chr9	+	2894	13	novel_not_in_catalog	MAN1B1	novel	2769	13	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	1799	junction_12	155205.3973693677	NA	3	NA	TRUE	NA	NA	NA	C	coding	653	1962	29	1990	15.0	-13	True	GATAAA	-15
PB.11918.7	chr9	+	2611	13	full-splice_match	MAN1B1	ENST00000371589.8	2769	13	152	6	-1	0	multi-exon	FALSE	canonical	1	366756	junction_8	89948.0477890185	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	30	2021	15.0	-2	True	GATAAA	-15
PB.11918.1	chr9	+	3111	13	novel_not_in_catalog	MAN1B1	novel	2769	13	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	canonical	1	4372	junction_12	154578.67019711912	NA	2	NA	TRUE	NA	NA	NA	C	coding	635	1908	45	1952	15.0	-29	True	GATAAA	-14
PB.172.18	chr1	-	4078	6	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	0	153	intron_retention	FALSE	canonical	1	316270	junction_1	277609.5050897213	NA	4	NA	TRUE	NA	NA	NA	C	coding	114	345	3636	3980	30.0	-1	True	NA	NA
PB.12177.1	chrX	-	3706	8	full-splice_match	TSPAN6	ENST00000373020.8	2206	8	61	-1561	-56	0	multi-exon	FALSE	canonical	1	315217	junction_7	111633.8885501008	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	52	789	30.0	5	True	AATAAA	-16
PB.3208.14	chr13	-	4025	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	285	161	0	-116	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	139	1467	20.0	-1	True	AATAAA	-20
PB.8448.8	chr3	+	6858	28	full-splice_match	U2SURP	ENST00000473835.6	7276	28	60	358	-11	-358	multi-exon	FALSE	canonical	1	338381	junction_23	180839.80833210156	NA	1	NA	TRUE	NA	NA	NA	C	coding	1029	3090	31	3120	20.0	-3	True	ATTAAA	-21
PB.1210.1	chr1	-	3605	24	novel_not_in_catalog	TARBP1	novel	5130	30	NA	NA	18800	-4	any annotated donor/acceptor	FALSE	canonical	1	84225	junction_20	130820.2754449964	NA	3	1	TRUE	NA	NA	NA	A	coding	1102	3309	63	3371	50.0	NA	False	AATAAA	-20
PB.12177.2	chrX	-	2023	8	full-splice_match	TSPAN6	ENST00000373020.8	2206	8	82	101	-35	-101	multi-exon	FALSE	canonical	1	315217	junction_7	111633.8885501008	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	31	768	65.0	26	True	NA	NA
PB.8002.10	chr3	+	1634	8	novel_not_in_catalog	CRTAP	novel	6630	7	NA	NA	8	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	504158.9565809334	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	17	1222	25.0	0	True	AAGAAA	-26
PB.7810.1	chr22	+	5121	30	novel_not_in_catalog	EP300	novel	9587	31	NA	NA	-12	-3275	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	102228.95269245844	NA	0	NA	TRUE	NA	NA	NA	B	coding	1545	4635	487	5121	70.0	13	True	NA	NA
PB.7810.3	chr22	+	3505	16	novel_in_catalog	EP300	novel	9587	31	NA	NA	810	-3578	combination_of_known_junctions	FALSE	canonical	1	21147	junction_10	91555.38055528044	NA	7	1	TRUE	NA	NA	NA	B	coding	1032	3096	410	3505	25.0	4	True	NA	NA
PB.7810.2	chr22	+	4114	21	incomplete-splice_match	EP300	ENST00000263253.8	9587	31	806	17327	806	2333	3prime_fragment	FALSE	canonical	1	173092	junction_1	59480.94741478148	NA	0	NA	TRUE	NA	NA	NA	B	coding	1233	3699	414	4112	50.0	0	True	AATAAA	-22
PB.8443.6	chr3	-	6565	41	full-splice_match	XRN1	ENST00000392981.6	5383	41	-45	-1137	-9	-732	multi-exon	FALSE	canonical	1	110988	junction_4	43183.639820075376	NA	0	NA	TRUE	NA	NA	NA	C	coding	1694	5085	94	5178	25.0	-1	True	ATTAAA	-21
PB.833.3	chr1	-	2156	6	full-splice_match	HDGF	ENST00000357325.9	2380	6	221	3	21	0	multi-exon	FALSE	canonical	1	1371409	junction_1	1337814.0678038036	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	95	817	25.0	-4	True	AATAAA	-15
PB.5406.10	chr18	+	3372	9	full-splice_match	SEH1L	ENST00000262124.15	3494	9	120	2	67	-2	multi-exon	FALSE	canonical	1	382033	junction_3	65299.128632083404	NA	4	NA	TRUE	NA	NA	NA	C	coding	360	1083	8	1090	15.0	40	False	AATAAA	-30
PB.8443.7	chr3	-	5381	41	full-splice_match	XRN1	ENST00000392981.6	5383	41	-23	25	-3	-25	multi-exon	FALSE	canonical	1	110988	junction_4	43183.639820075376	NA	0	NA	TRUE	NA	NA	NA	C	coding	1694	5085	72	5156	65.0	1	True	NA	NA
PB.8413.4	chr3	+	1900	12	novel_in_catalog	CEP63	novel	2943	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	49185	junction_1	78024.34848682421	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	184	1671	30.0	-15	True	AATAAA	-11
PB.9094.16	chr4	-	3791	21	novel_in_catalog	ACSL1	novel	3636	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	14826	junction_5	289067.15690097	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	201	2267	20.0	-19	True	AATAAA	-15
PB.1200.2	chr1	-	1889	3	full-splice_match	AL445524.1	ENST00000416221.5	465	3	-27	-1397	-27	1397	multi-exon	FALSE	canonical	1	222179	junction_2	2289.5	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-28	True	NA	NA
PB.1200.1	chr1	-	2164	3	full-splice_match	AL445524.1	ENST00000416221.5	465	3	-45	-1654	-45	1654	multi-exon	FALSE	canonical	1	222179	junction_2	2289.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-46	True	NA	NA
PB.6558.1	chr2	-	2083	1	intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.9094.14	chr4	-	3611	20	novel_in_catalog	ACSL1	novel	3636	20	NA	NA	68	-2	no_combination_of_known_junctions	FALSE	canonical	1	5583	junction_7	305006.9889241312	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	84	2084	20.0	1	True	AATAAA	-18
PB.6338.34	chr2	-	4991	21	novel_in_catalog	PUM2	novel	6112	20	NA	NA	2	18	combination_of_known_junctions	FALSE	canonical	1	19552	junction_20	218995.18816040223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	58	3252	40.0	-15	True	ATTAAA	-35
PB.9094.13	chr4	-	3602	20	full-splice_match	ACSL1	ENST00000507295.5	2490	20	68	-1180	68	0	multi-exon	FALSE	canonical	1	6571	junction_16	299547.46965443844	NA	28	1	TRUE	NA	NA	NA	C	coding	664	1995	84	2078	20.0	1	True	AATAAA	-15
PB.11068.4	chr8	-	2476	4	full-splice_match	DUSP4	ENST00000240100.6	5537	4	-13	3074	-13	401	multi-exon	FALSE	canonical	1	404631	junction_3	28603.313844533623	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	413	1588	50.0	0	True	NA	NA
PB.11543.3	chr9	+	2475	7	novel_in_catalog	ZCCHC7	novel	2619	9	NA	NA	-31	-2	no_combination_of_known_junctions	FALSE	canonical	1	6118	junction_2	84993.43156859568	NA	2	NA	TRUE	NA	NA	NA	C	coding	231	696	141	836	35.0	0	True	AATAAA	-11
PB.6594.9	chr2	+	4313	3	full-splice_match	MAT2A	ENST00000469221.5	691	3	0	-3622	0	-2	multi-exon	FALSE	canonical	1	1214857	junction_2	483388.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	121	423	20.0	0	True	AATAAA	-18
PB.6594.8	chr2	+	1596	9	full-splice_match	MAT2A	ENST00000306434.7	2819	9	3	1220	0	452	multi-exon	FALSE	canonical	1	715016	junction_8	552725.8510904728	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	121	1308	20.0	0	True	AGTAAA	-17
PB.11068.2	chr8	-	5595	4	full-splice_match	DUSP4	ENST00000240100.6	5537	4	-57	-1	-57	1	multi-exon	FALSE	canonical	1	404631	junction_3	28603.313844533623	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	457	1632	10.0	-3	True	AATAAA	-16
PB.11068.3	chr8	-	1902	1	incomplete-splice_match	DUSP4	ENST00000240100.6	5537	4	15702	1	13839	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	3516	False	AATAAA	-14
PB.6594.3	chr2	+	4409	2	full-splice_match	MAT2A	ENST00000465151.5	583	2	-2	-3824	1	-2	multi-exon	FALSE	canonical	1	2181634	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-18
PB.6594.2	chr2	+	3978	5	incomplete-splice_match	MAT2A	ENST00000306434.7	2819	9	0	2	0	-2	intron_retention	FALSE	canonical	1	1071348	junction_3	443732.3310484458	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	124	762	20.0	-3	True	AATAAA	-18
PB.6594.1	chr2	+	4061	4	incomplete-splice_match	MAT2A	ENST00000306434.7	2819	9	0	2	0	-2	intron_retention	FALSE	canonical	1	1071348	junction_3	493061.5921189653	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	124	564	20.0	-3	True	AATAAA	-18
PB.6594.7	chr2	+	2749	9	novel_not_in_catalog	MAT2A	novel	2819	9	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	17304	junction_7	747748.7552966801	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	122	1243	20.0	-1	True	AATAAA	-18
PB.6594.6	chr2	+	6114	1	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-19
PB.6594.5	chr2	+	3321	8	incomplete-splice_match	MAT2A	ENST00000306434.7	2819	9	131	2	128	-2	intron_retention	FALSE	canonical	1	1071348	junction_3	490311.40022755135	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	182	1081	20.0	-3847	False	AATAAA	-18
PB.6594.4	chr2	+	3795	6	incomplete-splice_match	MAT2A	ENST00000306434.7	2819	9	1	2	1	-2	intron_retention	FALSE	canonical	1	1071348	junction_3	536686.4390154086	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	123	926	20.0	-2	True	AATAAA	-18
PB.11893.1	chr9	+	1454	4	full-splice_match	MRPS2	ENST00000241600.9	1510	4	48	8	-20	-8	multi-exon	FALSE	canonical	1	518812	junction_1	135260.11708063344	NA	0	NA	TRUE	NA	NA	NA	A	coding	249	750	174	923	35.0	-4	True	AATAAA	-15
PB.6918.8	chr2	-	2851	18	full-splice_match	GTF3C3	ENST00000263956.7	4282	18	4	1427	4	120	multi-exon	FALSE	canonical	1	235101	junction_12	66644.38452762351	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	87	2747	50.0	-44	True	AATAGA	-13
PB.290.6	chr1	+	1315	5	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	13	16234	-3	-5046	3prime_fragment	FALSE	canonical	1	530840	junction_4	80356.49580891081	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1104	212	1315	80.0	-25	True	NA	NA
PB.5713.1	chr19	-	1266	4	full-splice_match	TMED1	ENST00000214869.6	1340	4	67	7	-22	-7	multi-exon	FALSE	canonical	1	381956	junction_3	49405.3732390404	NA	0	NA	TRUE	NA	NA	NA	A	coding	227	684	33	716	40.0	2359	False	AATAAA	-11
PB.11475.1	chr9	-	3309	3	novel_in_catalog	RPS6	novel	1387	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	14744462	junction_2	6318047.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	45	320	10.0	-4	True	AATAAA	-17
PB.7077.8	chr2	+	4669	25	novel_not_in_catalog	INPP5D	novel	5274	27	NA	NA	2619	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	146346.66068040486	NA	1	NA	TRUE	NA	NA	NA	C	coding	1019	3060	416	3475	5.0	3	True	AATAAA	-18
PB.6338.36	chr2	-	4742	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	4	8	combination_of_known_junctions	FALSE	canonical	1	19552	junction_19	220150.37967247187	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	56	3013	60.0	-13	True	ATTAAA	-25
PB.2960.4	chr12	+	1858	10	full-splice_match	ACADS	ENST00000242592.8	1950	10	91	1	-35	-1	multi-exon	FALSE	canonical	1	181899	junction_3	53531.83078722508	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	61	1299	5.0	0	True	AATAAA	-15
PB.2960.5	chr12	+	2497	7	novel_in_catalog	ACADS	novel	1950	10	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	182715	junction_3	39494.344235036435	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	1199	1681	5.0	21	True	AATAAA	-15
PB.2960.2	chr12	+	2738	7	novel_in_catalog	ACADS	novel	1950	10	NA	NA	-35	-1	intron_retention	FALSE	canonical	1	220345	junction_1	30761.058470446398	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	1589	2179	5.0	0	True	AATAAA	-15
PB.2960.3	chr12	+	2078	9	novel_in_catalog	ACADS	novel	1950	10	NA	NA	-35	-1	intron_retention	FALSE	canonical	1	182715	junction_3	50974.047318065444	NA	3	NA	TRUE	NA	NA	NA	C	coding	196	591	929	1519	5.0	0	True	AATAAA	-15
PB.2960.1	chr12	+	2463	8	novel_in_catalog	ACADS	novel	1950	10	NA	NA	36	-1	intron_retention	TRUE	canonical	1	220345	junction_1	45500.686581049944	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	1314	1904	5.0	-16	True	AATAAA	-15
PB.7077.1	chr2	+	4846	27	full-splice_match	INPP5D	ENST00000445964.5	4845	27	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	128363.76959617861	NA	1	NA	TRUE	NA	NA	NA	C	coding	1189	3570	83	3652	5.0	0	True	AATAAA	-18
PB.7077.2	chr2	+	2548	1	novel_in_catalog	INPP5D	novel	5274	27	NA	NA	-33	-62925	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	120	363	642	1004	70.0	-9	True	NA	NA
PB.7077.3	chr2	+	2541	6	full-splice_match	INPP5D	ENST00000451407.4	2545	6	-33	37	-33	-37	multi-exon	FALSE	canonical	0	0	junction_5	110989.371670264	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	147	959	80.0	-9	True	NA	NA
PB.7077.4	chr2	+	4851	27	novel_not_in_catalog	INPP5D	novel	5274	27	NA	NA	-24	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	141752.51114883812	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	1672	3657	5.0	0	True	AATAAA	-18
PB.7077.5	chr2	+	5522	26	novel_in_catalog	INPP5D	novel	5274	27	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_5	133044.51954109196	NA	2	NA	TRUE	NA	NA	NA	C	coding	633	1902	2427	4328	5.0	0	True	AATAAA	-18
PB.7077.6	chr2	+	5476	26	novel_not_in_catalog	INPP5D	novel	5274	27	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_5	142729.85827081313	NA	2	1	TRUE	NA	NA	NA	C	coding	633	1902	2381	4282	5.0	2	True	AATAAA	-18
PB.7077.7	chr2	+	2865	6	full-splice_match	INPP5D	ENST00000451407.4	2545	6	-1	-319	-1	319	multi-exon	FALSE	canonical	0	0	junction_5	110989.371670264	NA	6	NA	TRUE	NA	NA	NA	C	coding	270	813	115	927	70.0	-8	True	NA	NA
PB.6799.18	chr2	+	2276	8	incomplete-splice_match	MARCH7	ENST00000259050.8	5922	10	7	7880	-1	-4222	3prime_fragment	FALSE	canonical	1	144099	junction_1	196683.47570725332	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	116	2239	30.0	0	True	AATAAA	-20
PB.10942.8	chr7	-	3586	11	novel_in_catalog	KMT2C	novel	16862	59	NA	NA	23	-26048	intron_retention	FALSE	canonical	1	27476	junction_4	93141.80539671754	NA	0	NA	TRUE	NA	NA	NA	B	coding	554	1665	197	1861	75.0	5	True	ATTAAA	-39
PB.10103.5	chr6	+	3019	1	novel_in_catalog	PNRC1	novel	2065	2	NA	NA	-21	-327	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	142	429	1954	2382	30.0	2	True	TTTAAA	-26
PB.6502.4	chr2	+	1541	4	full-splice_match	AC012368.1	ENST00000451350.1	1504	4	-41	4	4	-4	multi-exon	FALSE	canonical	1	45123	junction_1	25730.49190271254	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	2	True	NA	NA
PB.8920.2	chr4	+	6092	7	novel_in_catalog	SGMS2	novel	582	3	NA	NA	-136	-8	combination_of_known_junctions	FALSE	canonical	1	65438	junction_1	20793.33558832947	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	509	1606	40.0	-649	False	AATAAA	-26
PB.7931.7	chr3	+	2663	27	incomplete-splice_match	FANCD2	ENST00000287647.7	5219	43	18	26696	3	0	3prime_fragment	FALSE	canonical	1	149	junction_21	64590.59081035541	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2586	76	2661	65.0	-8	True	NA	NA
PB.7931.6	chr3	+	2526	26	novel_in_catalog	FANCD2	novel	5219	43	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	149	junction_20	73063.71317031185	NA	1	NA	TRUE	NA	NA	NA	C	coding	815	2445	82	2526	65.0	-14	True	NA	NA
PB.7931.5	chr3	+	4469	44	full-splice_match	FANCD2	ENST00000383807.5	5102	44	-7	640	-7	8	multi-exon	FALSE	canonical	1	149	junction_21	77307.21559750174	NA	0	NA	TRUE	NA	NA	NA	C	coding	1451	4356	86	4441	10.0	-18	True	GATAAA	-17
PB.10381.14	chr7	+	2296	13	full-splice_match	WIPI2	ENST00000404704.7	1663	13	-13	-620	-13	1	multi-exon	FALSE	canonical	1	43561	junction_1	290894.352463179	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	188	1519	25.0	0	True	ATTAAA	-21
PB.7931.3	chr3	+	2597	26	novel_in_catalog	FANCD2	novel	5219	43	NA	NA	1	-9	no_combination_of_known_junctions	FALSE	canonical	1	3393	junction_21	60406.609343494856	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	93	2042	70.0	-25	True	NA	NA
PB.7931.2	chr3	+	3472	28	novel_not_in_catalog	FANCD2	novel	5219	43	NA	NA	1	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	79159.11515647869	NA	4	1	TRUE	NA	NA	NA	C	coding	476	1428	2043	3470	70.0	-25	True	NA	NA
PB.7931.1	chr3	+	5119	44	full-splice_match	FANCD2	ENST00000383807.5	5102	44	-15	-2	0	2	multi-exon	TRUE	canonical	1	149	junction_21	77307.21559750174	NA	1	NA	TRUE	NA	NA	NA	C	coding	1451	4356	94	4449	15.0	-26	True	AATAAA	-18
PB.10027.6	chr6	-	3157	18	novel_not_in_catalog	MCM3	novel	3083	17	NA	NA	12	-2	any annotated donor/acceptor	FALSE	canonical	1	670	junction_1	508155.39063031744	NA	5	1	TRUE	NA	NA	NA	C	coding	839	2520	66	2585	25.0	2	True	AATAAA	-22
PB.6417.5	chr2	+	2183	10	full-splice_match	NDUFAF7	ENST00000002125.8	2176	10	-9	2	-6	-2	multi-exon	FALSE	canonical	1	94200	junction_5	34726.953511965636	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	50	1375	35.0	-1	True	AATAAA	-23
PB.10103.3	chr6	+	1664	3	novel_not_in_catalog	PNRC1	novel	816	2	NA	NA	-3	-326	any annotated donor/acceptor	FALSE	canonical	1	21660	junction_1	297090.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	148	1026	30.0	-3	True	TTTAAA	-27
PB.6417.7	chr2	+	1444	10	full-splice_match	NDUFAF7	ENST00000002125.8	2176	10	-7	739	-4	1	multi-exon	FALSE	canonical	1	94200	junction_5	34726.953511965636	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	48	1373	50.0	1	True	AATAAA	-20
PB.6417.6	chr2	+	1970	9	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	22057	junction_5	56009.33960956869	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	50	1162	35.0	-1	True	AATAAA	-23
PB.6417.1	chr2	+	2643	10	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	0	5	intron_retention	FALSE	canonical	1	31729	junction_9	50321.98706723595	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	76	720	0.0	-197	False	AAGAAA	-20
PB.7931.9	chr3	+	2792	27	incomplete-splice_match	FANCD2	ENST00000419585.5	5185	44	-52	28975	18	-9	3prime_fragment	FALSE	canonical	1	149	junction_21	69481.47554934907	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2577	214	2790	70.0	7	True	NA	NA
PB.10381.12	chr7	+	2098	13	full-splice_match	WIPI2	ENST00000404704.7	1663	13	-15	-420	-15	0	multi-exon	FALSE	canonical	1	43561	junction_1	290894.352463179	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	190	1521	10.0	-2	True	ATTAAA	-16
PB.2251.1	chr11	-	3842	7	full-splice_match	PDGFD	ENST00000393158.6	3801	7	-40	-1	-40	1	multi-exon	FALSE	canonical	1	60308	junction_6	11956.162186179236	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	221	1333	30.0	-1	True	AATAAA	-23
PB.5534.5	chr18	-	4805	3	novel_in_catalog	MBP	novel	2281	7	NA	NA	10	-16	intron_retention	FALSE	canonical	1	2647	junction_1	68452.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	64	195	592	786	35.0	1372	False	ATTAAA	-15
PB.2251.3	chr11	-	2258	7	full-splice_match	PDGFD	ENST00000302251.9	4052	7	-9	1803	-9	-1803	multi-exon	FALSE	canonical	1	17750	junction_6	24494.154933144535	NA	2	NA	TRUE	NA	NA	NA	C	coding	364	1095	462	1556	20.0	-18	True	ATTAAA	-19
PB.2251.2	chr11	-	2841	7	full-splice_match	PDGFD	ENST00000393158.6	3801	7	-175	1135	97	-1132	multi-exon	FALSE	canonical	1	60308	junction_6	11956.162186179236	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	356	1468	10.0	88	False	AATAGA	-34
PB.2251.4	chr11	-	2091	7	full-splice_match	PDGFD	ENST00000393158.6	3801	7	-258	1968	14	-1965	multi-exon	FALSE	canonical	1	60308	junction_6	11956.162186179236	NA	2	1	TRUE	NA	NA	NA	C	coding	370	1113	439	1551	60.0	5	True	NA	NA
PB.5534.2	chr18	-	2127	5	full-splice_match	MBP	ENST00000397865.9	2127	5	21	-21	0	-5	multi-exon	FALSE	canonical	1	1501237	junction_2	2290667.7952362495	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	58	540	20.0	5469	False	AATAAA	-14
PB.5534.3	chr18	-	2207	6	full-splice_match	MBP	ENST00000359645.7	1255	6	-26	-926	-3	-6	multi-exon	FALSE	canonical	1	48758	junction_5	3062385.014729572	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	61	621	20.0	5466	False	AATAAA	-13
PB.5534.8	chr18	-	5209	4	full-splice_match	MBP	ENST00000397863.5	4800	4	-425	16	-425	-16	multi-exon	FALSE	canonical	1	5093	junction_3	123406.44720416983	NA	8	NA	TRUE	NA	NA	NA	C	coding	197	594	597	1190	35.0	2097	False	ATTAAA	-15
PB.9540.13	chr5	-	3149	9	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	121	0	intron_retention	FALSE	canonical	1	32519	junction_6	156882.06390585055	NA	9	NA	TRUE	NA	NA	NA	C	coding	778	2337	62	2398	90.0	4	True	NA	NA
PB.9540.12	chr5	-	3225	9	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	17	0	intron_retention	FALSE	canonical	1	3844	junction_8	136111.2197905058	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	141	2474	90.0	1239	False	NA	NA
PB.9540.14	chr5	-	3169	9	novel_not_in_catalog	NR3C1	novel	6795	9	NA	NA	519	0	intron_retention	FALSE	canonical	1	31	junction_8	137279.6535980478	NA	2	1	TRUE	NA	NA	NA	C	coding	777	2334	85	2418	90.0	3133	False	NA	NA
PB.9540.17	chr5	-	3010	9	full-splice_match	NR3C1	ENST00000394464.6	6795	9	-96	3881	86	-1	multi-exon	FALSE	canonical	1	185341	junction_8	83664.47375790695	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	600	2933	15.0	1555	False	TATAAA	-18
PB.9540.18	chr5	-	2989	4	incomplete-splice_match	NR3C1	ENST00000394464.6	6795	9	-13	31161	-13	-8531	3prime_fragment	FALSE	canonical	1	185341	junction_3	80846.92235329679	NA	2	NA	TRUE	NA	NA	NA	C	coding	494	1485	517	2001	90.0	-28	True	NA	NA
PB.8473.36	chr3	+	4108	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	6	-3	no_combination_of_known_junctions	FALSE	canonical	1	17264	junction_1	353867.2988247148	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	402	1274	75.0	0	True	TTTAAA	-6
PB.7222.1	chr20	-	3639	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-129	23029	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	10	NA	TRUE	NA	NA	NA	B	coding	106	321	2683	3003	5.0	NA	False	NA	NA
PB.7222.2	chr20	-	3492	8	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-141	23029	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	128	387	406	792	5.0	NA	False	NA	NA
PB.7222.3	chr20	-	3345	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-140	23029	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	106	321	2389	2709	5.0	NA	False	NA	NA
PB.7222.4	chr20	-	3240	6	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-165	23025	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	106	321	2288	2608	10.0	NA	False	NA	NA
PB.7222.5	chr20	-	3094	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-165	22753	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	106	321	2414	2734	25.0	NA	False	AATAAA	-20
PB.7222.6	chr20	-	3929	8	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-165	4281	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	177	534	659	1192	50.0	NA	False	AATAAA	-8
PB.7222.7	chr20	-	3840	8	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-164	4281	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	201	606	658	1263	50.0	NA	False	AATAAA	-8
PB.7222.8	chr20	-	3113	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-129	3572	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	15	NA	TRUE	NA	NA	NA	B	coding	128	387	699	1085	40.0	NA	False	AATAAA	-16
PB.7222.9	chr20	-	2828	7	novel_not_in_catalog	FRG1EP	novel	770	9	NA	NA	-149	3572	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	11	NA	TRUE	NA	NA	NA	B	coding	128	387	414	800	40.0	NA	False	AATAAA	-16
PB.1278.6	chr10	-	1693	11	full-splice_match	GDI2	ENST00000380191.8	2412	11	90	629	-27	-3	multi-exon	FALSE	canonical	1	343612	junction_3	692698.5903814515	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	202	1539	20.0	-30	False	AGTAAA	-25
PB.1278.5	chr10	-	2185	11	full-splice_match	GDI2	ENST00000380191.8	2412	11	68	159	-49	-153	multi-exon	FALSE	canonical	1	343612	junction_3	692698.5903814515	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	224	1561	30.0	-52	False	AATAAA	-35
PB.1278.4	chr10	-	2207	10	full-splice_match	GDI2	ENST00000380181.7	1408	10	-69	-730	-48	-1	multi-exon	FALSE	canonical	1	77958	junction_7	832376.0663587636	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	223	1425	5.0	-51	False	AATAAA	-18
PB.1278.3	chr10	-	2104	11	full-splice_match	GDI2	ENST00000380191.8	2412	11	300	8	138	-2	multi-exon	FALSE	canonical	1	343612	junction_3	692698.5903814515	NA	2	1	TRUE	NA	NA	NA	C	coding	423	1272	58	1329	20.0	180	False	AATAAA	-11
PB.1278.2	chr10	-	3044	11	full-splice_match	GDI2	ENST00000380191.8	2412	11	117	-749	0	749	multi-exon	FALSE	canonical	1	343612	junction_3	692698.5903814515	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	175	1512	65.0	-3	True	NA	NA
PB.1278.1	chr10	-	3947	11	full-splice_match	GDI2	ENST00000380191.8	2412	11	112	-1647	-5	1647	multi-exon	FALSE	canonical	1	343612	junction_3	692698.5903814515	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	180	1517	20.0	-8	True	AATAAA	-25
PB.9434.4	chr5	-	6351	16	novel_in_catalog	AC008695.1	novel	6393	29	NA	NA	-37	-215824	intron_retention	FALSE	canonical	1	8386	junction_14	46466.0215400458	NA	1	NA	TRUE	NA	NA	NA	A	coding	1093	3282	100	3381	10.0	-4	True	AATAAA	-17
PB.9434.3	chr5	-	6485	17	full-splice_match	FNIP1	ENST00000307968.11	6388	17	-98	1	-2	0	multi-exon	FALSE	canonical	1	90497	junction_11	28007.79051888956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1138	3417	99	3515	10.0	-3	True	AATAAA	-17
PB.9434.2	chr5	-	6567	18	full-splice_match	FNIP1	ENST00000510461.5	3845	18	0	-2722	0	0	multi-exon	FALSE	canonical	1	48353	junction_12	40561.02549429426	NA	1	NA	TRUE	NA	NA	NA	C	coding	1166	3501	97	3597	10.0	-1	True	AATAAA	-17
PB.9561.2	chr5	-	1206	8	full-splice_match	CD74	ENST00000353334.10	1449	8	174	69	-4	-40	multi-exon	FALSE	canonical	1	10293791	junction_7	3590728.973021006	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	7	705	20.0	-5	True	NA	NA
PB.9561.3	chr5	-	3669	6	full-splice_match	CD74	ENST00000517752.5	816	6	-8	-2845	-3	-4	multi-exon	FALSE	canonical	1	10293791	junction_5	3501454.49540304	NA	11	1	TRUE	NA	NA	NA	C	coding	279	840	6	845	15.0	-4	True	AATAAA	-14
PB.7925.2	chr3	+	2525	16	novel_in_catalog	IL17RC	novel	2342	17	NA	NA	2	0	intron_retention	FALSE	canonical	1	79221	junction_15	59962.693967573614	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	213	1016	20.0	-5	True	AATAAA	-19
PB.9561.1	chr5	-	1496	9	full-splice_match	CD74	ENST00000009530.11	981	9	-4	-511	-4	-4	multi-exon	FALSE	canonical	1	1855426	junction_3	7001088.640443462	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	7	897	15.0	-5	True	AATAAA	-14
PB.9561.6	chr5	-	2965	1	novel_in_catalog	CD74	novel	1138	6	NA	NA	-5	-3087	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	87	264	60	323	75.0	-6	True	NA	NA
PB.9561.4	chr5	-	3356	7	novel_in_catalog	CD74	novel	1138	6	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	10293791	junction_6	3873692.012740329	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	5	844	15.0	-3	True	AATAAA	-14
PB.9561.5	chr5	-	1616	7	novel_in_catalog	CD74	novel	1138	6	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	10293791	junction_6	3201203.397369882	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	7	780	15.0	-5	True	AATAAA	-14
PB.5987.4	chr19	-	1966	13	novel_in_catalog	PAF1	novel	2066	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	8322	junction_12	256912.3323974326	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	263	1828	15.0	7292	False	AATAAA	-15
PB.976.1	chr1	-	4237	7	full-splice_match	RNASEL	ENST00000367559.7	4238	7	0	1	0	-1	multi-exon	FALSE	canonical	1	48964	junction_6	11244.752061146864	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	255	2480	20.0	-4	True	AATAAA	-16
PB.5987.2	chr19	-	2046	14	novel_not_in_catalog	PAF1	novel	2066	14	NA	NA	3	8	any annotated donor/acceptor	FALSE	canonical	1	1036	junction_11	262550.8230665504	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	325	1899	20.0	-1	True	AATAAA	-24
PB.5987.3	chr19	-	1802	14	full-splice_match	PAF1	ENST00000221265.7	2066	14	263	1	150	0	multi-exon	FALSE	canonical	1	478024	junction_13	157606.04960087317	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	69	1664	15.0	7486	False	AATAAA	-15
PB.5987.1	chr19	-	1978	14	full-splice_match	PAF1	ENST00000221265.7	2066	14	305	-217	192	217	multi-exon	FALSE	canonical	1	478024	junction_13	157606.04960087317	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	27	1622	45.0	-1	True	ATTAAA	-14
PB.9311.1	chr5	-	4987	6	novel_not_in_catalog	LHFPL2	novel	4680	3	NA	NA	4	-14	any annotated donor/acceptor	FALSE	canonical	1	6912	junction_1	49656.583540956584	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	495	938	20.0	-6	True	ATTAAA	-17
PB.8921.8	chr4	+	1745	5	full-splice_match	CYP2U1	ENST00000332884.10	4944	5	189	3010	-27	-1220	multi-exon	FALSE	canonical	1	49286	junction_1	17027.230490819697	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	87	1721	65.0	9	True	AATATA	-43
PB.2245.8	chr11	+	4647	9	full-splice_match	BIRC3	ENST00000263464.7	5197	9	-11	561	0	-118	multi-exon	FALSE	canonical	1	176072	junction_1	132822.9514225963	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	2762	4576	30.0	0	True	ATTAAA	-27
PB.2245.9	chr11	+	6807	9	full-splice_match	BIRC3	ENST00000263464.7	5197	9	-11	-1599	0	-61	multi-exon	FALSE	canonical	1	176072	junction_1	132822.9514225963	NA	2	NA	TRUE	NA	NA	NA	C	coding	604	1815	2762	4576	35.0	0	True	AATAAA	-28
PB.9311.5	chr5	-	4858	5	novel_not_in_catalog	LHFPL2	novel	4680	3	NA	NA	12	-14	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	58438.01419666825	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	536	1192	20.0	9	True	ATTAAA	-17
PB.9311.7	chr5	-	4938	4	novel_in_catalog	LHFPL2	novel	4680	3	NA	NA	-14	-14	combination_of_known_junctions	FALSE	canonical	1	7075	junction_3	55222.03175263374	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	616	1272	20.0	53	False	ATTAAA	-17
PB.9311.6	chr5	-	4974	5	full-splice_match	LHFPL2	ENST00000380345.6	5043	5	55	14	55	-14	multi-exon	FALSE	canonical	1	83678	junction_2	22072.3763262477	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	652	1308	20.0	1	True	ATTAAA	-17
PB.2245.2	chr11	+	2649	10	novel_not_in_catalog	BIRC3	novel	4342	10	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	192932.21615881217	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	205	2019	15.0	-3	True	AATAAA	-18
PB.2245.3	chr11	+	2633	2	incomplete-splice_match	BIRC3	ENST00000263464.7	5197	9	-13	13355	-2	2137	3prime_fragment	FALSE	canonical	1	176072	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-2	True	NA	NA
PB.8921.3	chr4	+	2097	5	full-splice_match	CYP2U1	ENST00000332884.10	4944	5	180	2667	-36	-877	multi-exon	FALSE	canonical	1	49286	junction_1	17027.230490819697	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	96	1730	35.0	0	True	NA	NA
PB.2245.1	chr11	+	5206	9	full-splice_match	BIRC3	ENST00000263464.7	5197	9	-11	2	0	-2	multi-exon	FALSE	canonical	1	176072	junction_1	132822.9514225963	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	2762	4576	15.0	0	True	AATAAA	-18
PB.2245.6	chr11	+	3269	8	novel_in_catalog	BIRC3	novel	4342	10	NA	NA	-1	-74	no_combination_of_known_junctions	FALSE	canonical	1	11412	junction_1	191882.8127562896	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	362	1051	40.0	-1	True	AATAAA	-15
PB.2245.7	chr11	+	1029	2	incomplete-splice_match	BIRC3	ENST00000263464.7	5197	9	-11	14957	0	535	3prime_fragment	FALSE	canonical	1	176072	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.2245.4	chr11	+	5339	10	novel_in_catalog	BIRC3	novel	4342	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	13085	junction_1	217336.3652912232	NA	2	NA	TRUE	NA	NA	NA	C	coding	604	1815	2894	4708	15.0	-2	True	AATAAA	-19
PB.2245.5	chr11	+	4277	6	incomplete-splice_match	BIRC3	ENST00000263464.7	5197	9	-12	6302	-1	378	3prime_fragment	FALSE	canonical	1	176072	junction_1	159916.6070082779	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	2763	4094	55.0	-1	True	AATATA	-20
PB.9191.6	chr5	-	6466	39	full-splice_match	RICTOR	ENST00000296782.9	7505	39	0	1039	0	-1039	multi-exon	FALSE	canonical	1	80657	junction_28	37646.687049587206	NA	0	NA	TRUE	NA	NA	NA	C	coding	1732	5199	23	5221	45.0	-1	True	ATTAAA	-21
PB.6663.4	chr2	-	3354	7	novel_not_in_catalog	RNF149	novel	2010	8	NA	NA	0	-448	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	206070.76875466568	NA	3	NA	TRUE	NA	NA	NA	C	coding	294	885	114	998	30.0	-12	True	AATAAA	-20
PB.10098.8	chr6	-	1883	1	genic	AKIRIN2	novel	NA	NA	NA	NA	-59	124	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	116	351	585	935	30.0	-36	True	NA	NA
PB.467.6	chr1	-	4337	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	-5	-71	any annotated donor/acceptor	FALSE	canonical	1	4034	junction_3	289454.3629895523	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	358	False	ATTAAA	-21
PB.10098.6	chr6	-	2192	1	genic	AKIRIN2	novel	NA	NA	NA	NA	-27	465	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	coding	116	351	553	903	70.0	-4	True	NA	NA
PB.10098.7	chr6	-	2059	1	genic	AKIRIN2	novel	NA	NA	NA	NA	-23	336	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	116	351	549	899	25.0	0	True	ATTAAA	-22
PB.10098.4	chr6	-	2825	1	novel_in_catalog	AKIRIN2	novel	1662	5	NA	NA	296	2105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	122	369	62	430	10.0	1003	False	NA	NA
PB.10098.5	chr6	-	3224	2	full-splice_match	AKIRIN2	ENST00000420494.2	413	2	-708	-2103	-24	2103	multi-exon	FALSE	canonical	1	273	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	NA	NA
PB.10098.2	chr6	-	1547	5	full-splice_match	AKIRIN2	ENST00000257787.5	1662	5	-65	180	-65	-180	multi-exon	FALSE	canonical	1	361628	junction_4	225906.36138176807	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	591	1202	30.0	-42	True	AATAAA	-19
PB.10098.3	chr6	-	3654	1	novel_in_catalog	AKIRIN2	novel	1662	5	NA	NA	152	2106	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	175	False	NA	NA
PB.5941.1	chr19	+	2377	4	novel_not_in_catalog	AC002116.2	novel	643	4	NA	NA	5	-20382	any annotated donor/acceptor	FALSE	canonical	1	3884	junction_3	11964.361700019308	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	4	True	NA	NA
PB.6428.22	chr2	-	3195	5	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	381799	junction_1	1152610.7779027142	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	104	502	20.0	1	True	AATAAA	-13
PB.467.4	chr1	-	4426	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	8	-71	any annotated donor/acceptor	FALSE	canonical	1	5665	junction_3	288276.5255933745	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	7	True	ATTAAA	-21
PB.6732.11	chr2	-	2640	4	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	9	1304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45248.62531245194	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-19	True	NA	NA
PB.6428.20	chr2	-	4701	4	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	2207138	junction_3	470745.16962105467	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	104	502	20.0	1	True	AATAAA	-13
PB.5503.1	chr18	-	3535	3	full-splice_match	RNF152	ENST00000591306.5	682	3	-108	-2745	-92	2745	multi-exon	FALSE	canonical	1	17634	junction_2	8885.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	203	612	449	1060	25.0	121	False	AAGAAA	-17
PB.3991.1	chr15	-	3621	24	novel_in_catalog	MAN2C1	novel	397	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	147062	junction_23	129619.46834097919	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	19	1977	15.0	-3	True	AATAAA	-14
PB.3991.3	chr15	-	3270	26	full-splice_match	MAN2C1	ENST00000267978.9	3284	26	12	2	-6	0	multi-exon	FALSE	canonical	1	147062	junction_25	130578.68708247298	NA	0	NA	TRUE	NA	NA	NA	C	coding	1040	3123	36	3158	15.0	-20	True	AATAAA	-14
PB.3991.2	chr15	-	3281	26	novel_not_in_catalog	MAN2C1	novel	397	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	25909	junction_3	152601.29711435092	NA	2	NA	TRUE	NA	NA	NA	C	coding	1048	3147	23	3169	15.0	-7	True	AATAAA	-14
PB.3991.5	chr15	-	3188	26	full-splice_match	MAN2C1	ENST00000569482.5	3177	26	-13	2	0	0	multi-exon	FALSE	canonical	1	73705	junction_3	147526.45023884228	NA	0	NA	TRUE	NA	NA	NA	C	coding	1017	3054	23	3076	15.0	-7	True	AATAAA	-14
PB.3991.4	chr15	-	3213	26	novel_not_in_catalog	MAN2C1	novel	397	2	NA	NA	-1	0	intron_retention	FALSE	canonical	1	8239	junction_6	156207.8659004136	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3078	24	3101	15.0	-8	True	AATAAA	-14
PB.5071.1	chr17	-	3791	23	novel_in_catalog	OSBPL7	novel	3640	23	NA	NA	10	4	intron_retention	FALSE	canonical	1	12063	junction_10	34001.019965164094	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	1654	2868	20.0	9698	False	AATAAA	-17
PB.5071.2	chr17	-	3698	23	full-splice_match	OSBPL7	ENST00000007414.7	3640	23	-54	-4	10	4	multi-exon	FALSE	canonical	1	61709	junction_22	27844.93940074938	NA	3	1	TRUE	NA	NA	NA	C	coding	842	2529	247	2775	20.0	9698	False	AATAAA	-17
PB.5071.3	chr17	-	3639	23	novel_not_in_catalog	OSBPL7	novel	3640	23	NA	NA	-3	0	intron_retention	FALSE	canonical	1	413	junction_4	35172.929272811	NA	3	NA	TRUE	NA	NA	NA	C	coding	830	2493	229	2721	15.0	-13	True	AATAAA	-12
PB.10027.3	chr6	-	3203	18	novel_not_in_catalog	MCM3	novel	3083	17	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	6987	junction_13	519280.6406594231	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	722	2629	25.0	-1	True	AATAAA	-24
PB.7334.17	chr20	-	3744	22	full-splice_match	ZMYND8	ENST00000360911.7	4991	22	0	1247	0	-20	multi-exon	FALSE	canonical	1	122743	junction_19	84392.95635880753	NA	0	NA	TRUE	NA	NA	NA	C	coding	1135	3408	37	3444	90.0	-8	True	NA	NA
PB.6680.4	chr2	+	1945	13	incomplete-splice_match	RANBP2	ENST00000283195.10	11711	29	20	32730	20	-16	3prime_fragment	FALSE	canonical	1	1378	junction_2	124851.40074401672	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1839	107	1945	75.0	19	True	AATACA	-45
PB.8192.12	chr3	+	5439	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	40	3294	40	2613	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	21	NA	TRUE	NA	NA	NA	C	coding	609	1830	64	1893	35.0	30	True	AATAAA	-17
PB.8192.11	chr3	+	3488	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	10	5275	10	632	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	94	1923	20.0	0	True	AATACA	-14
PB.8192.10	chr3	+	2866	3	full-splice_match	PDE12	ENST00000311180.8	8773	3	-2	5909	-1	-2	multi-exon	FALSE	canonical	1	217448	junction_1	13339.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	609	1830	106	1935	15.0	-12	True	AATAAA	-15
PB.5152.1	chr17	-	3240	2	full-splice_match	PTRH2	ENST00000393038.2	901	2	142	-2481	-16	2481	multi-exon	FALSE	canonical	1	528664	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	87	626	30.0	-27	True	TATAAA	-6
PB.5152.3	chr17	-	2031	3	full-splice_match	PTRH2	ENST00000409433.2	2246	3	215	0	4	0	multi-exon	FALSE	canonical	1	31091	junction_2	24574.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	1361	1900	15.0	18	True	AATAAA	-17
PB.8607.1	chr3	+	1882	1	genic	XXYLT1-AS2	novel	NA	NA	NA	NA	-39	-2750	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	101	306	92	397	20.0	-15	True	ATTAAA	-13
PB.11981.6	chrX	-	4399	1	novel_in_catalog	PIR	novel	1282	10	NA	NA	20	-10507	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	8	True	NA	NA
PB.9305.8	chr5	-	2418	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	367	1173	-6	138	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	10	1389	40.0	-1	True	AATATA	-16
PB.8644.4	chr4	-	4073	3	full-splice_match	ZNF721	ENST00000505900.1	664	3	-9	-3400	-9	-695	multi-exon	FALSE	canonical	1	135609	junction_1	50324.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	194	3061	80.0	-27	False	NA	NA
PB.9305.2	chr5	-	4022	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	342	-406	-31	406	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	35	1414	35.0	-26	True	NA	NA
PB.9305.3	chr5	-	3802	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	371	-215	-2	215	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	4	NA	TRUE	NA	NA	NA	C	coding	459	1380	6	1385	30.0	3	True	NA	NA
PB.9305.1	chr5	-	7373	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	89	-3504	0	-775	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	5	NA	TRUE	NA	NA	NA	C	coding	459	1380	288	1667	25.0	-1	True	AATAAA	-13
PB.9305.6	chr5	-	3174	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	367	417	-6	-417	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	10	1389	30.0	-1	True	NA	NA
PB.11981.4	chrX	-	2154	6	novel_not_in_catalog	PIR	novel	1282	10	NA	NA	-15	-24242	any annotated donor/acceptor	FALSE	canonical	1	303	junction_1	111322.35769619686	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	167	673	35.0	48	False	AATAAA	-18
PB.9305.4	chr5	-	3868	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	92	-2	3	2	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	285	1664	20.0	2	True	NA	NA
PB.9305.5	chr5	-	3673	13	novel_not_in_catalog	WDR41	novel	376	3	NA	NA	-31	-6	any annotated donor/acceptor	FALSE	canonical	1	2186	junction_12	130243.39571921572	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	860	1477	30.0	472	False	NA	NA
PB.11981.5	chrX	-	2163	6	novel_not_in_catalog	PIR	novel	1282	10	NA	NA	9	-24243	any annotated donor/acceptor	FALSE	canonical	1	303	junction_1	128112.74610498364	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	177	683	40.0	-25	True	AATAAA	-17
PB.11981.2	chrX	-	1268	10	full-splice_match	PIR	ENST00000380421.3	1539	10	265	6	-11	-6	multi-exon	TRUE	canonical	1	33554	junction_9	106969.13524314697	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	197	1069	35.0	52	False	AATAAA	-18
PB.6722.2	chr2	+	2647	6	full-splice_match	TSN	ENST00000389682.7	3420	6	211	562	41	-3	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	37	723	25.0	15	True	AATAAA	-20
PB.11981.3	chrX	-	2913	5	incomplete-splice_match	PIR	ENST00000380420.9	1282	10	11	68809	11	-24233	3prime_fragment	FALSE	canonical	1	135860	junction_4	62174.49013864127	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	194	700	35.0	-1	True	AATAAA	-27
PB.476.4	chr1	+	1517	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	31	1706	1	-678	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1479	37	1515	10.0	-1	True	TATAAA	-19
PB.9337.7	chr5	-	5692	8	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	1	4426	junction_7	153853.79855842734	NA	4	NA	TRUE	NA	NA	NA	C	coding	339	1020	313	1332	10.0	-29	False	AGTAAA	-18
PB.10481.3	chr7	-	2421	1	incomplete-splice_match	DPY19L1	ENST00000638088.1	5075	22	106218	11	7930	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ATTAAA	-13
PB.8185.2	chr3	-	1489	5	full-splice_match	SELENOK	ENST00000495461.5	1633	5	126	18	3	-18	multi-exon	FALSE	canonical	1	393626	junction_3	296087.39423479344	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	75	350	65.0	-8	True	NA	NA
PB.8185.1	chr3	-	2435	5	full-splice_match	SELENOK	ENST00000495461.5	1633	5	112	-914	9	914	multi-exon	FALSE	canonical	1	393626	junction_3	296087.39423479344	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	89	364	30.0	-22	True	NA	NA
PB.11904.5	chr9	-	8918	31	novel_not_in_catalog	SEC16A	novel	1988	2	NA	NA	698	-1	any annotated donor/acceptor	FALSE	canonical	1	121934	junction_3	124988.58097351667	NA	0	NA	TRUE	NA	NA	NA	B	coding	2357	7074	194	7267	10.0	-22	True	AATAAA	-21
PB.10674.10	chr7	-	1376	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	39	5437	-22	-2704	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1143	232	1374	85.0	-7	True	AAGAAA	-11
PB.12011.8	chrX	+	3197	29	incomplete-splice_match	POLA1	ENST00000379068.7	5486	37	14	184251	-14	1954	3prime_fragment	FALSE	canonical	1	92870	junction_1	37402.6461530294	NA	3	2	TRUE	NA	NA	NA	C	coding	1056	3168	30	3197	55.0	12	True	AATAGA	-35
PB.1527.1	chr10	+	1724	2	full-splice_match	IFIT5	ENST00000371795.4	4015	2	161	2130	161	-2130	multi-exon	FALSE	canonical	1	158196	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	53	1501	45.0	0	True	ATTAAA	-19
PB.12011.5	chrX	+	5485	37	full-splice_match	POLA1	ENST00000379068.7	5486	37	-2	3	-2	0	multi-exon	FALSE	canonical	1	92870	junction_1	37371.283269209525	NA	0	NA	TRUE	NA	NA	NA	C	coding	1468	4407	46	4452	30.0	-4	True	AATAAA	-14
PB.12011.4	chrX	+	2550	23	incomplete-splice_match	POLA1	ENST00000379068.7	5486	37	-7	253723	-7	8910	3prime_fragment	FALSE	canonical	1	92870	junction_1	37694.70424935419	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2499	51	2549	55.0	-9	True	AAGAAA	-16
PB.12011.7	chrX	+	4470	35	novel_not_in_catalog	POLA1	novel	5486	37	NA	NA	8	4272	intron_retention	FALSE	canonical	1	4913	junction_34	44944.524724132985	NA	0	NA	TRUE	NA	NA	NA	C	coding	1350	4053	36	4088	25.0	6	True	NA	NA
PB.3985.1	chr15	-	2367	1	full-splice_match	RPP25	ENST00000322177.5	3049	1	676	6	676	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	199	600	206	805	25.0	-1	True	AATAAA	-14
PB.12011.1	chrX	+	5520	37	full-splice_match	POLA1	ENST00000379059.7	5440	37	-83	3	-55	0	multi-exon	TRUE	canonical	1	10062	junction_1	43265.07790257513	NA	0	NA	TRUE	NA	NA	NA	C	coding	1462	4389	99	4487	30.0	-57	False	AATAAA	-14
PB.1527.2	chr10	+	3131	2	full-splice_match	IFIT5	ENST00000371795.4	4015	2	105	779	105	-779	multi-exon	FALSE	canonical	1	158196	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	109	1557	20.0	-56	False	NA	NA
PB.12011.3	chrX	+	2447	15	incomplete-splice_match	POLA1	ENST00000379068.7	5486	37	-24	268356	-24	-5723	3prime_fragment	FALSE	canonical	1	92870	junction_1	36545.803633304895	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	68	1759	20.0	-26	True	NA	NA
PB.12011.2	chrX	+	3167	28	incomplete-splice_match	POLA1	ENST00000379068.7	5486	37	-32	186184	-32	21	3prime_fragment	FALSE	canonical	1	92870	junction_1	37849.46873870846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1030	3090	76	3165	45.0	-34	True	NA	NA
PB.8637.14	chr3	+	3123	10	novel_in_catalog	FYTTD1	novel	718	7	NA	NA	362	1554	combination_of_known_junctions	FALSE	canonical	1	8359	junction_3	276458.2749104184	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	415	1098	45.0	2	True	ATTAAA	-23
PB.1527.5	chr10	+	2349	2	full-splice_match	IFIT5	ENST00000371795.4	4015	2	-17	1683	-17	-1683	multi-exon	FALSE	canonical	1	158196	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	231	1679	70.0	1	True	NA	NA
PB.1527.6	chr10	+	2788	2	full-splice_match	IFIT5	ENST00000371795.4	4015	2	161	1066	161	-1066	multi-exon	FALSE	canonical	1	158196	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	53	1501	5.0	0	True	NA	NA
PB.5995.1	chr19	-	2395	11	full-splice_match	DYRK1B	ENST00000430012.6	2007	11	-22	-366	21	1	multi-exon	FALSE	canonical	1	91083	junction_10	57354.37838909947	NA	0	NA	TRUE	NA	NA	NA	A	coding	589	1770	260	2029	10.0	6566	False	AGTAAA	-15
PB.12259.8	chrX	-	2379	11	full-splice_match	ZDHHC9	ENST00000357166.10	4569	11	-2	2192	-2	-151	multi-exon	FALSE	canonical	1	292177	junction_10	60924.38839709431	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	395	1489	30.0	-1	True	AATAAA	-30
PB.12259.7	chrX	-	2360	11	novel_not_in_catalog	ZDHHC9	novel	4569	11	NA	NA	10	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	155617.332120847	NA	4	NA	TRUE	NA	NA	NA	C	coding	158	477	856	1332	75.0	11	True	NA	NA
PB.12259.6	chrX	-	2396	11	novel_not_in_catalog	ZDHHC9	novel	4569	11	NA	NA	-148	-13	any annotated donor/acceptor	FALSE	canonical	1	931	junction_10	127412.99695965087	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	274	1368	75.0	-10	True	NA	NA
PB.12259.5	chrX	-	2453	11	full-splice_match	ZDHHC9	ENST00000357166.10	4569	11	62	2054	62	-13	multi-exon	FALSE	canonical	1	292177	junction_10	60924.38839709431	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	331	1425	75.0	63	True	NA	NA
PB.1527.7	chr10	+	3856	2	full-splice_match	IFIT5	ENST00000371795.4	4015	2	159	0	159	0	multi-exon	FALSE	canonical	1	158196	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	55	1503	20.0	-2	True	AATAAA	-21
PB.12259.3	chrX	-	2836	10	novel_in_catalog	ZDHHC9	novel	4569	11	NA	NA	14	390	no_combination_of_known_junctions	FALSE	canonical	1	4550	junction_9	132916.56725606407	NA	7	NA	TRUE	NA	NA	NA	C	coding	364	1095	311	1405	15.0	15	True	ATTAAA	-14
PB.12259.2	chrX	-	2922	11	full-splice_match	ZDHHC9	ENST00000357166.10	4569	11	-4	1651	-4	390	multi-exon	FALSE	canonical	1	292177	junction_10	60924.38839709431	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	397	1491	15.0	-3	True	ATTAAA	-14
PB.7275.12	chr20	-	1770	11	full-splice_match	DSN1	ENST00000373750.8	2233	11	21	442	3	-442	multi-exon	FALSE	canonical	1	135298	junction_10	86946.29259974229	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	149	1219	65.0	-32	True	NA	NA
PB.5447.9	chr18	+	2560	3	full-splice_match	ZNF271P	ENST00000399070.3	5124	3	52	2512	-2	144	multi-exon	FALSE	canonical	1	243595	junction_1	58299.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	931	2202	75.0	18	False	AAGAAA	-43
PB.7275.10	chr20	-	1887	10	full-splice_match	DSN1	ENST00000448110.6	2129	10	-36	278	1	-278	multi-exon	FALSE	canonical	1	24204	junction_9	106199.5927456096	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	150	1172	70.0	-34	True	NA	NA
PB.7275.11	chr20	-	1858	11	novel_not_in_catalog	DSN1	novel	2441	11	NA	NA	-3	-278	intron_retention	FALSE	canonical	1	11103	junction_6	113223.3655073457	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	109	1143	70.0	8	True	NA	NA
PB.1145.4	chr1	-	4295	17	novel_in_catalog	TP53BP2	novel	4741	19	NA	NA	0	-190	combination_of_known_junctions	FALSE	canonical	1	5878	junction_16	76324.11119845664	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	328	3531	10.0	-8	True	AATAAA	-13
PB.1145.5	chr1	-	4302	19	novel_not_in_catalog	TP53BP2	novel	4741	19	NA	NA	8	-190	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	79972.63083149829	NA	2	NA	TRUE	NA	NA	NA	C	coding	1128	3387	152	3538	10.0	0	True	AATAAA	-13
PB.1145.1	chr1	-	4678	18	full-splice_match	TP53BP2	ENST00000343537.11	4651	18	-23	-4	-23	4	multi-exon	FALSE	canonical	1	147347	junction_17	52005.76847742311	NA	0	NA	TRUE	NA	NA	NA	C	coding	1128	3387	334	3720	35.0	-49	False	AATAAA	-20
PB.1145.2	chr1	-	4603	19	full-splice_match	TP53BP2	ENST00000391878.6	4741	19	-47	185	-5	-185	multi-exon	FALSE	canonical	1	14318	junction_17	93392.3195891932	NA	2	NA	TRUE	NA	NA	NA	C	coding	1067	3204	631	3834	5.0	-31	True	AATAAA	-18
PB.1145.3	chr1	-	4435	18	full-splice_match	TP53BP2	ENST00000343537.11	4651	18	26	190	8	-190	multi-exon	FALSE	canonical	1	147347	junction_17	52005.76847742311	NA	0	NA	TRUE	NA	NA	NA	C	coding	1128	3387	285	3671	10.0	0	True	AATAAA	-13
PB.11640.4	chr9	+	3344	17	full-splice_match	SECISBP2	ENST00000339901.8	3320	17	-19	-5	-6	-3	multi-exon	FALSE	canonical	1	53474	junction_2	101148.71314552694	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	371	2521	15.0	-11	True	AATAAA	-20
PB.1145.8	chr1	-	2389	13	incomplete-splice_match	TP53BP2	ENST00000343537.11	4651	18	-14	16557	-14	-282	3prime_fragment	FALSE	canonical	1	147347	junction_12	54721.2875403749	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2082	307	2388	45.0	-40	True	NA	NA
PB.3580.17	chr14	+	6552	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-6	7461	0	4094	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	73	1521	30.0	8	True	AGTAAA	-16
PB.2336.8	chr11	-	2168	10	novel_not_in_catalog	HSPA8	novel	2306	9	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	26613	junction_5	4130207.3456856054	NA	10	1	TRUE	NA	NA	NA	C	coding	237	714	1216	1929	25.0	-2	True	AATAAA	-20
PB.3580.15	chr14	+	1833	10	novel_not_in_catalog	GPATCH2L	novel	1791	11	NA	NA	0	-1663	intron_retention	FALSE	canonical	1	11385	junction_9	76740.1468889864	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	81	1424	75.0	0	True	NA	NA
PB.3580.14	chr14	+	4987	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	8	9012	8	2543	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	5	NA	TRUE	NA	NA	NA	C	coding	482	1449	59	1507	20.0	22	True	AATAAA	-33
PB.3580.13	chr14	+	3167	7	incomplete-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-14	34321	0	0	3prime_fragment	FALSE	canonical	1	137170	junction_1	42844.36360991827	NA	4	NA	TRUE	NA	NA	NA	C	coding	402	1209	81	1289	90.0	0	True	NA	NA
PB.3580.12	chr14	+	3234	10	novel_not_in_catalog	GPATCH2L	novel	1791	11	NA	NA	0	-2473	intron_retention	FALSE	canonical	1	6985	junction_9	77955.4114489356	NA	3	NA	TRUE	NA	NA	NA	C	coding	469	1410	81	1490	15.0	0	True	NA	NA
PB.3580.11	chr14	+	7022	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-14	6999	0	4556	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	4	NA	TRUE	NA	NA	NA	C	coding	482	1449	81	1529	55.0	0	True	NA	NA
PB.3580.10	chr14	+	4571	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-14	9450	0	2105	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	81	1529	35.0	0	True	AATAAA	-24
PB.2336.1	chr11	-	1804	8	full-splice_match	HSPA8	ENST00000453788.6	2004	8	197	3	1	-3	multi-exon	FALSE	canonical	1	106238	junction_1	3191963.6128190076	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	81	1562	25.0	-3	True	AATAAA	-23
PB.2336.3	chr11	-	2325	9	novel_in_catalog	HSPA8	novel	2306	9	NA	NA	-132	3	combination_of_known_junctions	FALSE	canonical	1	44358	junction_8	4328392.218414244	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	144	2084	25.0	-30	True	AATAAA	-22
PB.2336.2	chr11	-	2474	8	novel_in_catalog	HSPA8	novel	2306	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	1962133	junction_5	3839231.923411382	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	82	1260	25.0	-4	True	AATAAA	-22
PB.2336.5	chr11	-	2189	9	novel_in_catalog	HSPA8	novel	2306	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	8039	junction_8	4334521.838057421	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	188	1948	25.0	-1	True	AATAAA	-22
PB.2336.4	chr11	-	2312	9	full-splice_match	HSPA8	ENST00000534624.5	2463	9	146	5	18	2	multi-exon	FALSE	canonical	1	1962133	junction_6	3743752.4334361353	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	132	2072	20.0	802	False	AATAAA	-21
PB.3580.19	chr14	+	2875	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	1	11131	1	424	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	66	1514	30.0	15	True	TTTAAA	-21
PB.3580.18	chr14	+	1812	9	incomplete-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-6	17919	0	-161	3prime_fragment	FALSE	canonical	1	137170	junction_1	39139.15240443385	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	73	1413	25.0	8	True	ATTAAA	-16
PB.5583.4	chr19	-	3796	13	novel_in_catalog	MKNK2	novel	803	5	NA	NA	2	2	intron_retention	FALSE	canonical	1	362	junction_12	809898.0793744419	NA	0	NA	TRUE	NA	NA	NA	B	coding	510	1533	122	1654	10.0	0	True	AATAAA	-16
PB.922.4	chr1	+	3081	1	full-splice_match	AL021068.1	ENST00000392097.4	911	1	57	-2227	57	2227	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-8	True	NA	NA
PB.5583.1	chr19	-	3666	14	novel_in_catalog	MKNK2	novel	803	5	NA	NA	0	-3	intron_retention	FALSE	canonical	1	362	junction_13	807581.1499063625	NA	1	NA	TRUE	NA	NA	NA	B	coding	465	1398	124	1521	10.0	-2	True	AATAAA	-19
PB.3911.1	chr15	-	1854	4	full-splice_match	RPS27L	ENST00000330964.9	6434	4	319	4261	-6	1342	multi-exon	FALSE	canonical	1	2518128	junction_1	834500.2628952386	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-9	True	NA	NA
PB.3911.3	chr15	-	2598	3	full-splice_match	RPS27L	ENST00000439025.1	970	3	8	-1636	8	518	multi-exon	FALSE	canonical	1	2666743	junction_1	845625.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	529	False	AATACA	-6
PB.3911.5	chr15	-	2093	3	full-splice_match	RPS27L	ENST00000439025.1	970	3	-7	-1116	-7	-2	multi-exon	FALSE	canonical	1	2666743	junction_1	845625.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	514	False	AATAAA	-17
PB.3911.4	chr15	-	3629	1	novel_in_catalog	RPS27L	novel	6434	4	NA	NA	-6	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-9	True	AATAAA	-17
PB.3911.7	chr15	-	2693	1	novel_in_catalog	RPS27L	novel	6434	4	NA	NA	-4	182	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-7	True	TATAAA	-34
PB.3911.6	chr15	-	2970	2	full-splice_match	RPS27L	ENST00000482846.1	2944	2	-29	3	-7	3	multi-exon	FALSE	canonical	1	2666743	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	932	1273	15.0	514	False	AATAAA	-16
PB.8615.7	chr3	-	1854	12	novel_in_catalog	SDHAP1	novel	706	5	NA	NA	9	-22	no_combination_of_known_junctions	FALSE	canonical	1	5793	junction_8	56538.410239528515	NA	0	NA	TRUE	NA	NA	NA	B	coding	150	453	1193	1645	70.0	NA	False	GATAAA	-17
PB.5989.1	chr19	+	1700	2	full-splice_match	ZFP36	ENST00000597629.1	1786	2	36	50	-8	-6	multi-exon	FALSE	canonical	1	2674493	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	332	999	39	1037	10.0	2	True	AATATA	-32
PB.5989.2	chr19	+	2559	1	novel_in_catalog	ZFP36	novel	1786	2	NA	NA	-10	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	237	714	1255	1968	15.0	0	True	AATAAA	-13
PB.5989.3	chr19	+	2217	2	novel_not_in_catalog	ZFP36	novel	1786	2	NA	NA	-10	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	237	714	917	1630	15.0	0	True	AATAAA	-9
PB.5989.4	chr19	+	2155	2	novel_not_in_catalog	ZFP36	novel	1786	2	NA	NA	-9	-6	intron_retention	FALSE	canonical	1	7395	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	144	435	40	474	10.0	1	True	AATAAA	-14
PB.5438.8	chr18	-	5357	27	novel_in_catalog	TRAPPC8	novel	6226	29	NA	NA	9	-3	intron_retention	FALSE	canonical	1	1823	junction_5	68235.75875717336	NA	1	NA	TRUE	NA	NA	NA	C	coding	1162	3489	364	3852	25.0	0	True	AATAAA	-18
PB.8615.1	chr3	-	2467	16	novel_in_catalog	SDHAP1	novel	706	5	NA	NA	11	-8	combination_of_known_junctions	FALSE	canonical	1	2121	junction_12	54783.474512747816	NA	0	NA	TRUE	NA	NA	NA	B	coding	168	507	1595	2101	65.0	NA	False	AATAAA	-12
PB.11145.14	chr8	+	1828	9	full-splice_match	SDCBP	ENST00000260130.8	2167	9	92	247	0	-217	multi-exon	FALSE	canonical	1	278688	junction_5	325460.43059849745	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	59	955	10.0	0	True	GATAAA	-7
PB.5438.7	chr18	-	5338	30	novel_not_in_catalog	TRAPPC8	novel	6226	29	NA	NA	12	-3	any annotated donor/acceptor	FALSE	canonical	1	3325	junction_29	69742.23185515309	NA	32	3	TRUE	NA	NA	NA	C	coding	1435	4308	217	4524	25.0	3	True	AATAAA	-18
PB.6982.4	chr2	-	4602	10	novel_in_catalog	LANCL1	novel	4781	9	NA	NA	52	-3	combination_of_known_junctions	FALSE	canonical	1	20477	junction_9	160804.40526311676	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	168	1367	20.0	-19	True	AATAAA	-17
PB.8615.9	chr3	-	2883	8	novel_in_catalog	SDHAP1	novel	2491	17	NA	NA	3	1593	no_combination_of_known_junctions	FALSE	canonical	1	5793	junction_4	51569.837958849945	NA	0	NA	TRUE	NA	NA	NA	B	coding	132	399	707	1105	70.0	NA	False	NA	NA
PB.8615.8	chr3	-	3120	10	novel_in_catalog	SDHAP1	novel	2491	17	NA	NA	2	1593	combination_of_known_junctions	FALSE	canonical	1	5793	junction_4	48760.704042963036	NA	11	1	TRUE	NA	NA	NA	B	coding	200	603	740	1342	70.0	NA	False	NA	NA
PB.4912.2	chr17	-	2270	3	novel_not_in_catalog	PEX12	novel	2675	3	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	canonical	1	816	junction_2	41843.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	665	1285	15.0	-3	True	AATAAA	-15
PB.4912.1	chr17	-	2525	3	full-splice_match	PEX12	ENST00000225873.8	2675	3	149	1	72	0	multi-exon	FALSE	canonical	1	57565	junction_2	13468.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	460	1539	15.0	8705	False	AATAAA	-16
PB.4654.1	chr17	+	1479	8	full-splice_match	SERPINF1	ENST00000254722.8	1548	8	59	10	-11	-1	multi-exon	FALSE	canonical	1	832249	junction_2	372110.3824388892	NA	0	NA	TRUE	NA	NA	NA	A	coding	418	1257	105	1361	10.0	0	True	AATAAA	-16
PB.4398.6	chr16	-	3280	11	novel_in_catalog	C16orf58	novel	2783	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	392491	junction_10	115228.02553411214	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	41	1051	40.0	-30	False	NA	NA
PB.9764.20	chr6	-	3472	18	incomplete-splice_match	NUP153	ENST00000262077.2	5487	22	-556	14245	-109	-14245	3prime_fragment	FALSE	canonical	1	223217	junction_2	104044.61964998828	NA	5	NA	TRUE	NA	NA	NA	C	coding	972	2916	557	3472	65.0	-58	False	TTTAAA	-37
PB.4286.7	chr16	+	2414	7	incomplete-splice_match	CCP110	ENST00000396212.6	5549	15	89	11504	21	-162	3prime_fragment	FALSE	canonical	1	21387	junction_1	67776.12368776255	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	348	2414	65.0	1	True	AATAAA	-33
PB.4398.5	chr16	-	2588	14	novel_not_in_catalog	C16orf58	novel	2783	13	NA	NA	-1	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	183669.56732424925	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	20	1426	35.0	-9	True	NA	NA
PB.5339.2	chr17	+	2055	14	novel_in_catalog	GPS1	novel	561	4	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	25169	junction_1	498023.42515211925	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	46	1713	0.0	-14	True	ATTAAA	-16
PB.5332.3	chr17	-	1723	10	full-splice_match	SIRT7	ENST00000328666.10	1743	10	20	0	2	0	multi-exon	FALSE	canonical	1	142989	junction_8	72619.35971867706	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	44	1246	5.0	-27	True	ATTAAA	-16
PB.4286.5	chr16	+	5453	15	full-splice_match	CCP110	ENST00000396212.6	5549	15	88	8	20	0	multi-exon	FALSE	canonical	1	21387	junction_1	57505.70888877921	NA	1	NA	TRUE	NA	NA	NA	C	coding	991	2976	349	3324	45.0	0	True	AATAAA	-12
PB.4286.4	chr16	+	4436	14	novel_in_catalog	CCP110	novel	5549	15	NA	NA	20	-874	combination_of_known_junctions	FALSE	canonical	1	46931	junction_1	45658.59055485201	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	206	3181	100.0	0	True	NA	NA
PB.8467.3	chr3	+	1484	11	incomplete-splice_match	EIF2A	ENST00000460851.5	2198	14	80	8522	7	3659	3prime_fragment	FALSE	canonical	1	735725	junction_6	235030.51879115612	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1455	30	1484	60.0	-13	True	AAAACA	-7
PB.11699.1	chr9	-	9091	50	full-splice_match	ABCA1	ENST00000374736.7	10494	50	82	1321	-16	-1321	multi-exon	FALSE	canonical	1	47813	junction_49	36774.89510860723	NA	4	NA	TRUE	NA	NA	NA	A	coding	2261	6786	314	7099	65.0	-1	True	TTTAAA	-30
PB.255.1	chr1	+	1180	11	full-splice_match	EIF3I	ENST00000373586.1	1458	11	2	276	2	274	multi-exon	FALSE	canonical	1	1873792	junction_1	997895.3348583408	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	71	1048	65.0	-4106	False	NA	NA
PB.1015.6	chr1	+	4818	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	205	919	-16	570	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	39	1634	55.0	3	True	AATAAA	-20
PB.11186.2	chr8	-	4122	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-22	-1899	7	144	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	6	NA	TRUE	NA	NA	NA	C	coding	151	456	26	481	15.0	12	True	NA	NA
PB.1098.3	chr1	+	2967	12	full-splice_match	UTP25	ENST00000491415.6	8446	12	-16	5495	-16	-5495	multi-exon	FALSE	canonical	1	163794	junction_5	22441.84745308278	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	74	2344	45.0	-4	True	NA	NA
PB.2584.1	chr12	+	2244	3	novel_in_catalog	DDN-AS1	novel	1324	2	NA	NA	-3	3	intron_retention	FALSE	canonical	1	612	junction_2	3359.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	82	249	312	560	25.0	0	True	AATAAA	-16
PB.540.5	chr1	-	2402	5	full-splice_match	FAM69A	ENST00000370310.4	2574	5	-19	191	3	-191	multi-exon	FALSE	canonical	1	138786	junction_2	8170.429532772436	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	91	1377	40.0	970	False	ATTAAA	-13
PB.540.4	chr1	-	2528	5	full-splice_match	FAM69A	ENST00000370310.4	2574	5	38	8	38	-8	multi-exon	FALSE	canonical	1	138786	junction_2	8170.429532772436	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	34	1320	40.0	-1	True	AATAAA	-8
PB.540.3	chr1	-	3712	5	full-splice_match	FAM69A	ENST00000370310.4	2574	5	-19	-1119	3	1112	multi-exon	FALSE	canonical	1	138786	junction_2	8170.429532772436	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	91	1377	35.0	970	False	NA	NA
PB.540.1	chr1	-	1812	5	full-splice_match	FAM69A	ENST00000615519.4	865	5	60	-1007	38	1007	multi-exon	TRUE	canonical	1	2970	junction_1	63966.64794250204	NA	3	1	TRUE	NA	NA	NA	C	coding	162	489	34	522	85.0	-1	True	NA	NA
PB.240.35	chr1	-	3771	3	full-splice_match	PUM1	ENST00000524516.1	561	3	-22	-3188	9	3188	multi-exon	FALSE	canonical	1	562647	junction_1	11543.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	171	516	114	629	100.0	-1	True	NA	NA
PB.4345.5	chr16	-	2541	14	novel_not_in_catalog	SMG1P2	novel	4221	29	NA	NA	-18759	-17446	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	34326.730285517646	NA	0	NA	TRUE	NA	NA	NA	B	coding	156	471	1406	1876	10.0	-1	True	AATAAA	-32
PB.11639.1	chr9	+	615	3	full-splice_match	CKS2	ENST00000314355.6	613	3	-3	1	-3	-1	multi-exon	FALSE	canonical	1	630645	junction_2	408430.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-3	True	AATAAA	-18
PB.4345.7	chr16	-	2328	13	novel_not_in_catalog	SMG1P2	novel	4221	29	NA	NA	-18759	-17705	any annotated donor/acceptor	FALSE	canonical	1	40	junction_1	35679.625456585476	NA	0	NA	TRUE	NA	NA	NA	B	coding	190	573	86	658	35.0	-1	True	AATAAA	-21
PB.4345.6	chr16	-	2518	14	novel_not_in_catalog	SMG1P2	novel	4221	29	NA	NA	-422	-17449	any annotated donor/acceptor	FALSE	canonical	1	40	junction_1	18246.168274738102	NA	2	NA	TRUE	NA	NA	NA	B	coding	193	582	1773	2354	15.0	-1	True	AATAAA	-29
PB.4345.1	chr16	-	2589	13	novel_not_in_catalog	SMG1P2	novel	4221	29	NA	NA	-18759	-17444	any annotated donor/acceptor	FALSE	canonical	1	40	junction_1	35679.625456585476	NA	1	NA	TRUE	NA	NA	NA	B	coding	193	582	1839	2420	5.0	-1	True	AATAAA	-34
PB.4345.3	chr16	-	2646	14	novel_not_in_catalog	SMG1P2	novel	4221	29	NA	NA	-18759	-17445	any annotated donor/acceptor	FALSE	canonical	1	40	junction_1	34308.027297088236	NA	0	NA	TRUE	NA	NA	NA	B	coding	193	582	1897	2478	10.0	-1	True	AATAAA	-33
PB.4345.2	chr16	-	2476	13	incomplete-splice_match	SMG1P2	ENST00000566127.1	4221	29	-430	17444	-430	-17444	3prime_fragment	TRUE	canonical	1	40	junction_1	35953.721005466025	NA	1	NA	TRUE	NA	NA	NA	B	coding	193	582	1726	2307	5.0	-9	True	AATAAA	-34
PB.5373.1	chr18	+	2758	3	full-splice_match	LINC00667	ENST00000580684.5	1009	3	-468	-1281	-2	1256	multi-exon	FALSE	canonical	1	29670	junction_1	9905.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-18	True	NA	NA
PB.8609.1	chr3	-	7165	24	novel_not_in_catalog	ACAP2	novel	7160	23	NA	NA	39	-5	intron_retention	FALSE	canonical	1	6448	junction_20	105940.99478338762	NA	2	NA	TRUE	NA	NA	NA	C	coding	806	2421	158	2578	20.0	9	True	AATAAA	-23
PB.5373.3	chr18	+	2836	4	novel_not_in_catalog	LINC00667	novel	2935	3	NA	NA	-6	1257	any annotated donor/acceptor	FALSE	canonical	1	910	junction_1	22645.867628922206	NA	11	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-22	True	NA	NA
PB.5373.2	chr18	+	1318	1	full-splice_match	LINC00667	ENST00000581471.2	2034	1	241	475	-17	-475	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	35	108	267	374	50.0	-33	True	ATTAAA	-14
PB.5373.5	chr18	+	4114	5	novel_not_in_catalog	LINC00667	novel	2935	3	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	6834.88674010038	NA	6	NA	TRUE	NA	NA	NA	C	coding	117	354	896	1249	35.0	-3	True	NA	NA
PB.5373.4	chr18	+	4070	3	full-splice_match	LINC00667	ENST00000580684.5	1009	3	-468	-2593	-2	-4	multi-exon	FALSE	canonical	1	29670	junction_1	9905.5	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-18	True	NA	NA
PB.5373.7	chr18	+	5201	1	full-splice_match	LINC00667	ENST00000581471.2	2034	1	275	-3442	1	-610	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	35	108	233	340	85.0	1	True	NA	NA
PB.5373.6	chr18	+	5837	1	full-splice_match	LINC00667	ENST00000581471.2	2034	1	271	-4074	-3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	35	108	237	344	85.0	-3	True	NA	NA
PB.8609.8	chr3	-	7386	24	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	29	-13	intron_retention	FALSE	canonical	1	1357	junction_23	105466.2989752771	NA	6	NA	TRUE	NA	NA	NA	C	coding	734	2205	603	2807	15.0	-1	True	AATAAA	-15
PB.5373.8	chr18	+	3986	2	novel_not_in_catalog	LINC00667	novel	2935	3	NA	NA	-7	-5	any annotated donor/acceptor	FALSE	canonical	1	74	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	21	True	NA	NA
PB.4244.1	chr16	+	2146	2	full-splice_match	CIITA	ENST00000573379.1	2147	2	-1	2	-1	-2	multi-exon	FALSE	canonical	1	2370	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	1131	1655	15.0	-15	True	AATAAA	-33
PB.5402.4	chr18	-	5042	16	novel_not_in_catalog	SPIRE1	novel	5665	17	NA	NA	7311	-3	any annotated donor/acceptor	FALSE	canonical	1	15	junction_15	62735.88634996365	NA	3	NA	TRUE	NA	NA	NA	B	coding	622	1869	52	1920	15.0	-9423	False	AATAAA	-13
PB.5402.5	chr18	-	3579	15	novel_not_in_catalog	SPIRE1	novel	5665	17	NA	NA	29576	1387	any annotated donor/acceptor	FALSE	canonical	1	329	junction_14	60673.70778405837	NA	0	NA	TRUE	NA	NA	NA	B	coding	583	1752	307	2058	50.0	NA	False	AATAAA	-15
PB.8467.8	chr3	+	2100	14	full-splice_match	EIF2A	ENST00000460851.5	2198	14	95	3	1	-3	multi-exon	FALSE	canonical	1	735725	junction_6	295333.47177173395	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	15	1772	30.0	2	True	AATGAA	-18
PB.5402.1	chr18	-	5189	15	novel_not_in_catalog	SPIRE1	novel	5665	17	NA	NA	29572	1	any annotated donor/acceptor	FALSE	canonical	1	329	junction_14	60673.70778405837	NA	1	NA	TRUE	NA	NA	NA	B	coding	583	1752	311	2062	10.0	NA	False	AATAAA	-18
PB.11640.1	chr9	+	3488	17	full-splice_match	SECISBP2	ENST00000375807.7	3462	17	-36	10	-36	-2	multi-exon	FALSE	canonical	1	163826	junction_1	84418.77525754787	NA	1	NA	TRUE	NA	NA	NA	C	coding	854	2565	108	2672	20.0	-5	True	AATAAA	-13
PB.10593.1	chr7	-	2637	8	novel_in_catalog	NSUN5	novel	2269	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	198738	junction_5	110382.31500099819	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	1846	2448	25.0	-1	True	AATAAA	-21
PB.10593.2	chr7	-	1615	10	full-splice_match	NSUN5	ENST00000438747.6	1663	10	51	-3	0	-2	multi-exon	FALSE	canonical	1	102480	junction_4	135050.81854949598	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	27	1427	30.0	9	True	AATAAA	-20
PB.38.12	chr1	+	5171	4	incomplete-splice_match	TNFRSF14	ENST00000463471.6	4255	5	-138	1	27	-1	intron_retention	FALSE	canonical	1	447442	junction_1	47944.257716644235	NA	7	NA	TRUE	NA	NA	NA	C	coding	178	537	233	769	5.0	3	True	NA	NA
PB.38.13	chr1	+	1979	8	full-splice_match	TNFRSF14	ENST00000355716.4	1707	8	-13	-259	-13	259	multi-exon	FALSE	canonical	1	345281	junction_3	84565.52262245036	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	313	1164	20.0	-3539	False	NA	NA
PB.38.10	chr1	+	2497	9	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	1	9870	junction_1	216762.56497919417	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	228	785	10.0	0	True	NA	NA
PB.38.11	chr1	+	1874	8	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-107	0	intron_retention	FALSE	canonical	1	46397	junction_1	166437.56194502514	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	219	1052	20.0	0	True	NA	NA
PB.38.16	chr1	+	3220	6	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	5	-7	intron_retention	FALSE	canonical	1	410721	junction_4	59326.92255426705	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	295	831	15.0	0	True	NA	NA
PB.10232.1	chr6	+	1452	10	full-splice_match	PEX7	ENST00000318471.4	1464	10	6	6	6	-6	multi-exon	FALSE	canonical	1	62258	junction_1	30890.935484957437	NA	1	NA	TRUE	NA	NA	NA	A	coding	323	972	76	1047	40.0	-1	True	AATAAA	-24
PB.38.14	chr1	+	3028	7	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	34641	junction_5	237221.904889119	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	311	847	5.0	-3537	False	NA	NA
PB.38.15	chr1	+	3232	7	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	5	0	intron_retention	FALSE	canonical	1	60768	junction_4	182833.1728388843	NA	1	1	TRUE	NA	NA	NA	C	coding	178	537	295	831	20.0	0	True	NA	NA
PB.38.18	chr1	+	4230	5	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	447442	junction_1	44066.42208289096	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	263	799	20.0	-3489	False	NA	NA
PB.38.19	chr1	+	3671	5	full-splice_match	TNFRSF14	ENST00000496064.5	1480	5	24	-2215	10	1	multi-exon	FALSE	canonical	1	345281	junction_3	83676.14682624613	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	85	639	10.0	18	True	NA	NA
PB.10987.1	chr8	+	4213	6	novel_not_in_catalog	FAM66A	novel	921	2	NA	NA	58	26076	any annotated donor/acceptor	TRUE	canonical	1	365	junction_1	2309.1513072988528	NA	0	NA	TRUE	NA	NA	NA	A	coding	66	201	189	389	10.0	NA	False	NA	NA
PB.11640.2	chr9	+	3369	17	novel_in_catalog	SECISBP2	novel	3462	17	NA	NA	-32	-3	combination_of_known_junctions	FALSE	canonical	1	89049	junction_6	93963.45335878931	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	104	2554	25.0	-1	True	AATAAA	-12
PB.6853.9	chr2	-	2714	13	full-splice_match	LNPK	ENST00000272748.8	7610	13	58	4838	7	443	multi-exon	FALSE	canonical	1	92135	junction_12	59236.50127502093	NA	3	NA	TRUE	NA	NA	NA	C	coding	428	1287	191	1477	10.0	-21	True	AATACA	-16
PB.6853.8	chr2	-	3367	13	full-splice_match	LNPK	ENST00000272748.8	7610	13	64	4179	-2	1102	multi-exon	FALSE	canonical	1	92135	junction_12	59236.50127502093	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	185	1471	45.0	-15	True	TATAAA	-7
PB.1801.1	chr11	+	1243	8	full-splice_match	EIF3F	ENST00000309828.4	1254	8	12	-1	-5	1	multi-exon	FALSE	canonical	1	1214	junction_2	852985.6690215868	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	22	1095	20.0	-5	True	AATAAA	-24
PB.9863.5	chr6	+	2761	5	novel_not_in_catalog	TCF19	novel	3290	4	NA	NA	-15	-437	intron_retention	FALSE	canonical	1	32337	junction_2	117640.1112554196	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	663	1700	30.0	-62	True	AATAAA	-24
PB.1801.3	chr11	+	3788	8	full-splice_match	EIF3F	ENST00000309828.4	1254	8	15	-2549	-2	2549	multi-exon	FALSE	canonical	1	1214	junction_2	852985.6690215868	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	19	1092	75.0	-2	True	NA	NA
PB.1801.2	chr11	+	3860	1	novel_in_catalog	EIF3F	novel	7540	10	NA	NA	-2	-1799	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	145	438	19	456	95.0	-2	True	NA	NA
PB.6853.5	chr2	-	3760	14	novel_not_in_catalog	LNPK	novel	7610	13	NA	NA	-6	1413	any annotated donor/acceptor	FALSE	canonical	1	15	junction_4	97903.79858234343	NA	5	NA	TRUE	NA	NA	NA	C	coding	454	1365	189	1553	30.0	-19	True	AATAAA	-18
PB.6853.4	chr2	-	3824	14	novel_not_in_catalog	LNPK	novel	7610	13	NA	NA	4	1414	any annotated donor/acceptor	FALSE	canonical	1	11205	junction_11	92788.98919725616	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	555	1616	30.0	-24	True	AATAAA	-19
PB.6853.7	chr2	-	3545	14	novel_in_catalog	LNPK	novel	7610	13	NA	NA	-18	1102	combination_of_known_junctions	FALSE	canonical	1	13964	junction_11	92370.11186122078	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	588	1649	45.0	507	False	TATAAA	-7
PB.6853.6	chr2	-	3676	13	full-splice_match	LNPK	ENST00000272748.8	7610	13	66	3868	0	1413	multi-exon	FALSE	canonical	1	92135	junction_12	59236.50127502093	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	183	1469	30.0	-13	True	AATAAA	-18
PB.11286.12	chr8	+	3167	7	full-splice_match	FZD6	ENST00000358755.4	3788	7	47	574	2	291	multi-exon	FALSE	canonical	1	191219	junction_1	51534.50422262954	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	373	2391	30.0	-20	True	AATAAA	-21
PB.10885.3	chr7	-	3403	7	novel_in_catalog	MKRN1	novel	3151	8	NA	NA	-13	-26	intron_retention	FALSE	canonical	1	313508	junction_5	90921.11381240822	NA	8	NA	TRUE	NA	NA	NA	C	coding	316	951	1009	1959	80.0	123	False	NA	NA
PB.4359.2	chr16	+	1314	8	novel_in_catalog	PPP4C	novel	846	7	NA	NA	-4	-11	combination_of_known_junctions	FALSE	canonical	1	89539	junction_2	765691.1192150901	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	354	1040	70.0	-7	True	GATAAA	-10
PB.4359.3	chr16	+	1394	9	full-splice_match	PPP4C	ENST00000279387.11	1407	9	13	0	2	0	multi-exon	FALSE	canonical	1	1151707	junction_1	299463.92417900276	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	156	1079	10.0	0	True	AATAAA	-16
PB.4359.1	chr16	+	1427	9	novel_in_catalog	PPP4C	novel	846	7	NA	NA	4	-11	combination_of_known_junctions	FALSE	canonical	1	40667	junction_2	727210.8131801861	NA	6	1	TRUE	NA	NA	NA	C	coding	228	687	467	1153	70.0	-9	True	GATAAA	-10
PB.9673.7	chr5	-	3673	22	novel_not_in_catalog	TBC1D9B	novel	3838	2	NA	NA	-40	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	206828.08704780613	NA	0	NA	TRUE	NA	NA	NA	C	coding	1061	3186	79	3264	60.0	-10	True	AATAAA	-7
PB.11818.9	chr9	-	3297	27	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	-3	185	combination_of_known_junctions	FALSE	canonical	1	189214	junction_25	121849.67186960041	NA	1	NA	TRUE	NA	NA	NA	C	coding	1017	3054	59	3112	70.0	-1	True	ACTAAA	-2
PB.11640.3	chr9	+	2817	17	full-splice_match	SECISBP2	ENST00000375807.7	3462	17	6	639	6	-631	multi-exon	FALSE	canonical	1	163826	junction_1	84418.77525754787	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	66	2630	25.0	1	True	NA	NA
PB.11621.1	chr9	-	4883	10	novel_in_catalog	UBQLN1	novel	4118	11	NA	NA	-49	-1	intron_retention	FALSE	canonical	1	863295	junction_8	169799.91282290657	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	305	1756	5.0	260	False	AATAAA	-20
PB.3939.3	chr15	+	2194	9	novel_in_catalog	MAP2K1	novel	3410	11	NA	NA	75	175	no_combination_of_known_junctions	FALSE	canonical	1	11623	junction_5	218965.44667192214	NA	1	1	TRUE	NA	NA	NA	C	coding	284	855	437	1291	75.0	0	True	AATAAA	-10
PB.3939.2	chr15	+	2443	10	novel_in_catalog	MAP2K1	novel	3410	11	NA	NA	75	175	no_combination_of_known_junctions	FALSE	canonical	1	35385	junction_3	173244.9988318477	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	437	1540	75.0	0	True	AATAAA	-10
PB.3939.1	chr15	+	2501	12	novel_not_in_catalog	MAP2K1	novel	3410	11	NA	NA	40	175	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	205968.1436585492	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	417	1598	75.0	-5404	False	AATAAA	-10
PB.3939.5	chr15	+	2080	11	novel_not_in_catalog	MAP2K1	novel	3410	11	NA	NA	15038	177	any annotated donor/acceptor	FALSE	canonical	1	6123	junction_1	208537.04558089914	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	60	1175	75.0	-4	True	AATAAA	-12
PB.3939.4	chr15	+	2137	11	full-splice_match	MAP2K1	ENST00000307102.9	3410	11	479	794	459	175	multi-exon	FALSE	canonical	1	110016	junction_8	185628.6833041704	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	53	1234	75.0	-4985	False	AATAAA	-10
PB.11818.5	chr9	-	3335	25	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	-12	376	combination_of_known_junctions	FALSE	canonical	1	211097	junction_19	117144.98364514898	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	68	2959	65.0	-10	True	NA	NA
PB.10583.1	chr7	+	4034	3	novel_not_in_catalog	AUTS2	novel	7006	19	NA	NA	-3387	-28525	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	8733	False	AATAAA	-34
PB.8724.9	chr4	+	1666	11	full-splice_match	RBPJ	ENST00000348160.8	1752	11	204	-118	-3	1	multi-exon	FALSE	canonical	1	102696	junction_7	142386.2501372938	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	26	1489	100.0	-10	True	NA	NA
PB.8364.8	chr3	-	3855	13	full-splice_match	OSBPL11	ENST00000296220.5	4191	13	-486	822	-486	-822	multi-exon	FALSE	canonical	1	90825	junction_12	46527.201139270845	NA	2	NA	TRUE	NA	NA	NA	C	coding	747	2244	777	3020	65.0	-80	True	NA	NA
PB.11818.4	chr9	-	3408	26	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	-4	376	combination_of_known_junctions	FALSE	canonical	1	189214	junction_24	124862.77477867613	NA	0	NA	TRUE	NA	NA	NA	C	coding	990	2973	60	3032	65.0	-2	True	NA	NA
PB.10579.1	chr7	-	2663	4	incomplete-splice_match	SBDS	ENST00000246868.6	1631	5	-88	4	-88	-4	intron_retention	FALSE	canonical	1	1378190	junction_2	120704.08163585668	NA	3	NA	TRUE	NA	NA	NA	C	coding	225	678	1296	1973	25.0	-104	False	AATAAA	-41
PB.10579.2	chr7	-	1524	5	full-splice_match	SBDS	ENST00000246868.6	1631	5	6	101	6	-34	multi-exon	FALSE	canonical	1	1267060	junction_4	157502.79887354383	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	179	931	45.0	-10	True	AATAAA	-15
PB.10579.3	chr7	-	1794	5	novel_not_in_catalog	SBDS	novel	1631	5	NA	NA	2	-27	intron_retention	FALSE	canonical	1	8414	junction_4	671015.448746711	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	693	1127	20.0	-14	True	AATAAA	-18
PB.10204.1	chr6	+	2178	1	antisense	novelGene_ECHDC1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.1162.4	chr1	-	3680	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-28	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	48	1403	30.0	-17	True	NA	NA
PB.7510.5	chr21	-	4873	11	novel_in_catalog	SETD4	novel	4272	10	NA	NA	9	-1	intron_retention	FALSE	canonical	1	53970	junction_2	40437.028867239984	NA	25	NA	TRUE	NA	NA	NA	C	coding	307	924	208	1131	15.0	5	True	ATTAAA	-15
PB.949.3	chr1	+	1120	6	full-splice_match	CACYBP	ENST00000367679.6	2766	6	318	1328	96	303	multi-exon	FALSE	canonical	1	783	junction_2	169895.48244894564	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	131	817	25.0	0	True	AATAAA	-17
PB.7510.6	chr21	-	3363	12	novel_not_in_catalog	SETD4	novel	4272	10	NA	NA	1	-1	intron_retention	FALSE	canonical	1	17345	junction_4	48178.87353317447	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	216	1181	15.0	-3	True	ATTAAA	-15
PB.7556.10	chr21	-	4955	5	novel_in_catalog	UBE2G2	novel	3566	6	NA	NA	0	340	intron_retention	FALSE	canonical	1	604634	junction_4	184103.78842517064	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	3783	4169	35.0	-5	True	NA	NA
PB.8448.19	chr3	+	6629	27	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-7	-10	intron_retention	FALSE	canonical	1	338381	junction_22	176936.97861995883	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	4483	6243	35.0	1	True	AATAAA	-11
PB.7510.7	chr21	-	3278	13	novel_not_in_catalog	SETD4	novel	4272	10	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	17345	junction_5	46622.859760455016	NA	8	NA	TRUE	NA	NA	NA	C	coding	321	966	255	1220	15.0	-15	True	ATTAAA	-15
PB.7556.11	chr21	-	4284	5	novel_in_catalog	UBE2G2	novel	3566	6	NA	NA	-5	12	intron_retention	FALSE	canonical	1	604634	junction_4	184103.78842517064	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	3788	4174	25.0	6	True	NA	NA
PB.8448.13	chr3	+	6432	21	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-8	735	intron_retention	FALSE	canonical	1	346998	junction_9	161615.22088185258	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	28	1266	70.0	0	True	NA	NA
PB.8448.12	chr3	+	4136	28	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-8	-181	combination_of_known_junctions	FALSE	canonical	1	338381	junction_23	179259.38693287462	NA	1	NA	TRUE	NA	NA	NA	C	coding	1028	3087	28	3114	30.0	0	True	AATAAA	-13
PB.8448.10	chr3	+	3012	27	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-11	19	combination_of_known_junctions	FALSE	canonical	1	98355	junction_26	197146.44246941071	NA	2	1	TRUE	NA	NA	NA	C	coding	970	2913	31	2943	80.0	-3	True	NA	NA
PB.8448.17	chr3	+	7543	26	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-8	-10	intron_retention	FALSE	canonical	1	338381	junction_21	180757.58140897547	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	5397	7157	35.0	0	True	AATAAA	-11
PB.7556.12	chr21	-	1982	4	full-splice_match	UBE2G2	ENST00000462569.5	762	4	-15	-1205	3	-1098	multi-exon	FALSE	canonical	1	604634	junction_3	68087.82725764325	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3	True	NA	NA
PB.8448.15	chr3	+	3567	6	novel_not_in_catalog	U2SURP	novel	725	6	NA	NA	-8	-1612	intron_retention	FALSE	non_canonical	0	0	junction_5	293485.0427193863	NA	3	NA	TRUE	NA	NA	NA	C	coding	153	462	28	489	70.0	0	True	NA	NA
PB.7510.1	chr21	-	3436	14	novel_not_in_catalog	SETD4	novel	4272	10	NA	NA	-2	0	any annotated donor/acceptor	TRUE	canonical	1	10206	junction_3	43380.954382904	NA	9	2	TRUE	NA	NA	NA	C	coding	105	318	409	726	10.0	-3	True	ATTAAA	-17
PB.7510.2	chr21	-	3444	14	novel_not_in_catalog	SETD4	novel	4272	10	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	97	junction_7	55606.22444193087	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	261	1205	15.0	1	True	ATTAAA	-16
PB.2739.6	chr12	+	5489	14	novel_not_in_catalog	HELB	novel	12866	13	NA	NA	11	-842	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	14259.905186950871	NA	1	NA	TRUE	NA	NA	NA	C	coding	1087	3264	49	3312	10.0	-24	True	AGTAAA	-22
PB.2739.7	chr12	+	4573	14	novel_not_in_catalog	HELB	novel	12866	13	NA	NA	0	-1821	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	14259.905186950871	NA	1	NA	TRUE	NA	NA	NA	C	coding	1087	3264	25	3288	65.0	0	True	NA	NA
PB.2739.4	chr12	+	1927	5	novel_not_in_catalog	HELB	novel	12866	13	NA	NA	-36	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	21805.874260162098	NA	2	1	TRUE	NA	NA	NA	C	coding	508	1527	96	1622	15.0	-17	True	AATAAA	-17
PB.2739.5	chr12	+	3273	12	incomplete-splice_match	HELB	ENST00000545134.1	3586	14	-24	11935	11	-6450	3prime_fragment	FALSE	canonical	1	21001	junction_5	10408.186406116236	NA	12	NA	TRUE	NA	NA	NA	C	coding	1069	3210	49	3258	25.0	-24	True	TTTAAA	-25
PB.2739.2	chr12	+	3297	13	full-splice_match	HELB	ENST00000247815.8	12866	13	35	9534	0	-47	multi-exon	FALSE	canonical	1	21001	junction_5	9974.642392294907	NA	2	NA	TRUE	NA	NA	NA	C	coding	1087	3264	25	3288	35.0	0	True	AAGAAA	-15
PB.2739.3	chr12	+	2411	3	novel_not_in_catalog	HELB	novel	12866	13	NA	NA	-44	-846	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	26957.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	101	306	104	409	10.0	-25	True	AGTAAA	-18
PB.2739.1	chr12	+	3985	13	full-splice_match	HELB	ENST00000247815.8	12866	13	-47	8928	-47	548	multi-exon	FALSE	canonical	1	21001	junction_5	9974.642392294907	NA	1	NA	TRUE	NA	NA	NA	C	coding	1087	3264	107	3370	25.0	-28	True	ATTAAA	-19
PB.2813.28	chr12	+	2413	13	full-splice_match	VEZT	ENST00000547997.5	3002	13	56	533	-1	5	multi-exon	FALSE	canonical	1	99045	junction_2	114608.58859938486	NA	1	NA	TRUE	NA	NA	NA	C	coding	720	2160	252	2411	70.0	6	True	NA	NA
PB.2813.29	chr12	+	2635	1	novel_in_catalog	VEZT	novel	571	6	NA	NA	3	-31985	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	10	True	NA	NA
PB.2813.24	chr12	+	2433	13	full-splice_match	VEZT	ENST00000552660.5	2712	13	-1	280	0	7	multi-exon	FALSE	canonical	1	99045	junction_2	119115.24488949067	NA	1	1	TRUE	NA	NA	NA	C	coding	725	2175	258	2432	70.0	0	True	NA	NA
PB.2813.25	chr12	+	2345	12	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	-8	intron_retention	FALSE	canonical	1	156688	junction_5	107207.03204062072	NA	1	1	TRUE	NA	NA	NA	C	coding	768	2304	41	2344	70.0	0	True	NA	NA
PB.2813.26	chr12	+	2402	13	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	-8	intron_retention	FALSE	canonical	1	12284	junction_2	148256.61980524307	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2361	41	2401	70.0	0	True	NA	NA
PB.2813.27	chr12	+	3959	12	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	18491	junction_11	137459.3716058111	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	40	1905	15.0	1	True	AATAAA	-16
PB.2813.20	chr12	+	4294	13	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	-272	intron_retention	FALSE	canonical	1	12284	junction_2	148256.61980524307	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	41	2449	10.0	0	True	CATAAA	-23
PB.2813.21	chr12	+	4227	12	novel_not_in_catalog	VEZT	novel	571	6	NA	NA	0	-280	intron_retention	FALSE	non_canonical	0	0	junction_5	134589.60222367579	NA	5	1	TRUE	NA	NA	NA	C	coding	500	1503	888	2390	15.0	0	True	CATAAA	-15
PB.2813.22	chr12	+	2962	13	full-splice_match	VEZT	ENST00000552660.5	2712	13	-1	-249	0	0	multi-exon	FALSE	canonical	1	99045	junction_2	119115.24488949067	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	258	2465	15.0	0	True	AATAAA	-16
PB.2813.23	chr12	+	2842	12	novel_not_in_catalog	VEZT	novel	571	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	2613	junction_3	138640.8755246732	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	41	2347	20.0	0	True	AATAAA	-14
PB.2011.2	chr11	-	7011	13	full-splice_match	ATL3	ENST00000398868.7	7135	13	123	1	123	-1	multi-exon	TRUE	canonical	1	219475	junction_12	75745.10279599857	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	155	1780	10.0	484	False	AATAAA	-13
PB.2011.7	chr11	-	2076	13	full-splice_match	ATL3	ENST00000398868.7	7135	13	-20	5079	-20	87	multi-exon	FALSE	canonical	1	219475	junction_12	75745.10279599857	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	298	1923	25.0	7	True	AATAAA	-14
PB.2011.6	chr11	-	2570	13	full-splice_match	ATL3	ENST00000398868.7	7135	13	186	4379	186	787	multi-exon	FALSE	canonical	1	219475	junction_12	75745.10279599857	NA	2	NA	TRUE	NA	NA	NA	C	coding	541	1626	92	1717	60.0	547	False	ACTAAA	-30
PB.2011.5	chr11	-	6417	13	full-splice_match	ATL3	ENST00000538786.1	1920	13	190	-4687	27	-479	multi-exon	FALSE	canonical	1	10845	junction_12	120208.67962662425	NA	20	1	TRUE	NA	NA	NA	C	coding	523	1572	93	1664	70.0	2	True	NA	NA
PB.7510.8	chr21	-	3148	12	novel_not_in_catalog	SETD4	novel	4272	10	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	15487	junction_8	45960.9777327328	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	214	603	15.0	-1	True	ATTAAA	-15
PB.2011.8	chr11	-	1892	13	full-splice_match	ATL3	ENST00000538786.1	1920	13	157	-129	-6	129	multi-exon	FALSE	canonical	1	10845	junction_12	120208.67962662425	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	126	1697	15.0	221	False	ATTAAA	-21
PB.11763.6	chr9	-	2245	7	full-splice_match	STOM	ENST00000286713.6	3010	7	-63	828	-15	-828	multi-exon	FALSE	canonical	1	696589	junction_6	241903.70189493222	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	82	948	30.0	12	False	NA	NA
PB.7510.9	chr21	-	3140	11	novel_in_catalog	SETD4	novel	4272	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	27000	junction_4	44767.889101006316	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	244	1566	15.0	-4	True	ATTAAA	-15
PB.9362.13	chr5	-	3527	23	incomplete-splice_match	CHD1	ENST00000614616.4	8095	36	191	25653	191	1609	3prime_fragment	FALSE	canonical	1	65261	junction_22	62572.88957073507	NA	0	NA	TRUE	NA	NA	NA	C	coding	1050	3150	377	3526	60.0	0	True	AAGAAA	-36
PB.9362.12	chr5	-	5491	26	novel_in_catalog	CHD1	novel	8095	36	NA	NA	-41	-2802	intron_retention	FALSE	canonical	1	65261	junction_25	61651.97152813202	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	609	4205	35.0	8	True	AATAAA	-21
PB.9362.11	chr5	-	4645	30	incomplete-splice_match	CHD1	ENST00000614616.4	8095	36	-37	15835	-37	-341	3prime_fragment	FALSE	canonical	1	65261	junction_29	73554.47114159908	NA	5	2	TRUE	NA	NA	NA	C	coding	1347	4041	605	4645	60.0	12	True	AATAAA	-22
PB.9362.10	chr5	-	4697	31	novel_in_catalog	CHD1	novel	8095	36	NA	NA	3	227	combination_of_known_junctions	FALSE	canonical	1	47194	junction_1	82490.2216795017	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4131	565	4695	75.0	-23	True	NA	NA
PB.5803.12	chr19	-	2944	15	incomplete-splice_match	CHERP	ENST00000546361.6	4173	17	76	1854	-39	161	3prime_fragment	FALSE	canonical	1	232277	junction_7	78215.41099480801	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	77	2542	45.0	-27	True	AATAAA	-18
PB.5803.11	chr19	-	2977	15	incomplete-splice_match	CHERP	ENST00000198939.6	4084	17	-39	1847	-39	161	3prime_fragment	FALSE	canonical	1	33442	junction_10	112669.34778669206	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	77	2575	45.0	-27	True	AATAAA	-18
PB.9362.14	chr5	-	1661	8	incomplete-splice_match	CHD1	ENST00000614616.4	8095	36	-38	45524	-38	-16375	3prime_fragment	FALSE	canonical	1	65261	junction_7	78712.51383149614	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1056	606	1661	65.0	11	True	AATGAA	-17
PB.5620.4	chr19	-	1676	7	novel_in_catalog	SIRT6	novel	1372	6	NA	NA	6	0	intron_retention	FALSE	canonical	1	215199	junction_1	18799.161563011854	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	21	770	20.0	-13	True	AATAAA	-18
PB.8759.1	chr4	+	2343	2	full-splice_match	SHISA3	ENST00000319234.4	1971	2	-384	12	-384	-12	multi-exon	FALSE	canonical	1	34164	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	238	717	603	1319	35.0	-33	True	AATAAA	-18
PB.5620.1	chr19	-	1618	8	full-splice_match	SIRT6	ENST00000337491.6	1641	8	23	0	-15	0	multi-exon	TRUE	canonical	1	215199	junction_2	17905.355223325492	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	43	1110	15.0	-35	False	AATAAA	-19
PB.5620.2	chr19	-	1471	7	full-splice_match	SIRT6	ENST00000600938.5	1473	7	2	0	2	0	multi-exon	FALSE	canonical	1	22752	junction_6	81563.88371223026	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	113	964	20.0	-17	True	AATAAA	-18
PB.5620.3	chr19	-	2111	7	novel_in_catalog	SIRT6	novel	1372	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	223065	junction_6	15885.72176952904	NA	3	NA	TRUE	NA	NA	NA	C	coding	239	720	9	728	20.0	-1	True	AATAAA	-18
PB.1096.5	chr1	+	3702	12	incomplete-splice_match	TRAF3IP3	ENST00000367025.7	2243	17	75	2660	-12	0	intron_retention	FALSE	canonical	1	145890	junction_1	111207.35481080614	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	346	1584	25.0	16	True	AATAAA	-17
PB.1096.4	chr1	+	2572	13	novel_in_catalog	TRAF3IP3	novel	1854	14	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	145890	junction_1	108628.30187910926	NA	5	1	TRUE	NA	NA	NA	C	coding	412	1239	360	1598	25.0	2	True	AATAAA	-14
PB.1096.6	chr1	+	2094	1	novel_in_catalog	TRAF3IP3	novel	1854	14	NA	NA	14	-1874	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	148	447	768	1214	60.0	-23	True	NA	NA
PB.1096.1	chr1	+	1930	14	incomplete-splice_match	TRAF3IP3	ENST00000367025.7	2243	17	84	2659	-3	0	3prime_fragment	FALSE	canonical	1	145890	junction_1	110441.77890876507	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	337	1677	30.0	25	True	AATAAA	-18
PB.11621.4	chr9	-	3366	8	novel_in_catalog	UBQLN1	novel	4118	11	NA	NA	-49	-1	combination_of_known_junctions	FALSE	canonical	1	14065	junction_7	444022.21559783263	NA	14	2	TRUE	NA	NA	NA	C	coding	412	1239	305	1543	5.0	260	False	AATAAA	-20
PB.220.8	chr1	-	2389	1	novel_in_catalog	EYA3	novel	6085	18	NA	NA	13	-75440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-15	True	NA	NA
PB.2713.4	chr12	+	1997	6	full-splice_match	TSFM	ENST00000454289.7	2192	6	198	-3	0	0	multi-exon	FALSE	canonical	1	408633	junction_1	53891.3829497815	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	16	993	0.0	0	True	ATTAAA	-32
PB.220.6	chr1	-	1869	17	full-splice_match	EYA3	ENST00000373863.3	1729	17	-138	-2	-6	2	multi-exon	FALSE	canonical	1	2973	junction_1	41683.283977916064	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	248	1858	25.0	-1	True	AATAAA	-18
PB.220.7	chr1	-	1607	15	incomplete-splice_match	EYA3	ENST00000373863.3	1729	17	-36	11202	-3	-2	3prime_fragment	FALSE	canonical	1	114966	junction_6	21610.597814096982	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1461	146	1606	20.0	9	True	NA	NA
PB.220.4	chr1	-	2210	17	full-splice_match	EYA3	ENST00000540618.5	5885	17	-49	3724	10	-603	multi-exon	FALSE	canonical	1	114966	junction_8	21493.323678165158	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	232	1815	75.0	1	True	NA	NA
PB.220.5	chr1	-	2193	18	novel_in_catalog	EYA3	novel	6085	18	NA	NA	-4	-603	combination_of_known_junctions	FALSE	canonical	1	25271	junction_7	43858.364731569	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	147	1097	75.0	8	True	NA	NA
PB.220.2	chr1	-	4615	17	full-splice_match	EYA3	ENST00000540618.5	5885	17	27	1243	-13	-1243	multi-exon	FALSE	canonical	1	114966	junction_8	21493.323678165158	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	156	1739	10.0	-1	True	NA	NA
PB.220.3	chr1	-	4392	17	full-splice_match	EYA3	ENST00000540618.5	5885	17	46	1447	6	-1447	multi-exon	FALSE	canonical	1	114966	junction_8	21493.323678165158	NA	6	NA	TRUE	NA	NA	NA	C	coding	527	1584	137	1720	60.0	18	True	NA	NA
PB.220.1	chr1	-	5860	17	full-splice_match	EYA3	ENST00000540618.5	5885	17	27	-2	-13	-1	multi-exon	FALSE	canonical	1	114966	junction_8	21493.323678165158	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	156	1739	5.0	-1	True	AATAAA	-16
PB.4710.3	chr17	-	5553	17	full-splice_match	NLRP1	ENST00000572272.5	4422	17	-550	-581	2	-46	multi-exon	FALSE	canonical	1	118753	junction_5	29503.833802721194	NA	0	NA	TRUE	NA	NA	NA	C	coding	1473	4422	551	4972	85.0	1	True	ATTAAA	-27
PB.4710.2	chr17	-	4745	17	novel_in_catalog	NLRP1	novel	5281	17	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	1	8766	junction_16	49002.666666874815	NA	0	NA	TRUE	NA	NA	NA	C	coding	1371	4116	219	4334	50.0	0	True	ATTAAA	-9
PB.4710.1	chr17	-	5104	16	novel_in_catalog	NLRP1	novel	5281	17	NA	NA	1	8	intron_retention	FALSE	canonical	1	116258	junction_1	32880.09430075691	NA	0	NA	TRUE	NA	NA	NA	C	coding	1371	4116	552	4667	45.0	0	True	AATAAA	-11
PB.4710.5	chr17	-	5345	18	full-splice_match	NLRP1	ENST00000617618.4	4788	18	23	-580	-10	-47	multi-exon	FALSE	canonical	1	19857	junction_17	44789.48013427887	NA	0	NA	TRUE	NA	NA	NA	C	coding	1473	4422	344	4765	85.0	19	True	ATTAAA	-26
PB.4710.4	chr17	-	5522	17	novel_not_in_catalog	NLRP1	novel	5281	17	NA	NA	3	-47	intron_retention	FALSE	canonical	1	21443	junction_1	45820.17983309865	NA	0	NA	TRUE	NA	NA	NA	C	coding	1408	4227	550	4776	85.0	2	True	ATTAAA	-26
PB.5616.2	chr19	-	2263	9	full-splice_match	DAPK3	ENST00000545797.6	2257	9	-11	5	-11	0	multi-exon	FALSE	canonical	1	26008	junction_8	274493.07831866975	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	256	1620	15.0	-3	True	AATAAA	-13
PB.5616.1	chr19	-	2174	9	novel_in_catalog	DAPK3	novel	2257	9	NA	NA	24	-6	combination_of_known_junctions	FALSE	canonical	1	362360	junction_8	201442.75566984128	NA	19	1	TRUE	NA	NA	NA	C	coding	454	1365	173	1537	15.0	-21	True	AATAAA	-7
PB.6315.1	chr2	-	3534	14	incomplete-splice_match	ROCK2	ENST00000401753.5	4017	29	26814	-1679	-12646	0	5prime_fragment	FALSE	canonical	1	290848	junction_1	40906.9914309155	NA	2	NA	TRUE	NA	NA	NA	A	coding	577	1734	16	1749	100.0	NA	False	NA	NA
PB.11763.1	chr9	-	3238	7	full-splice_match	STOM	ENST00000286713.6	3010	7	-230	2	-131	-2	multi-exon	FALSE	canonical	1	696589	junction_6	241903.70189493222	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	249	1115	25.0	-155	False	AATAAA	-18
PB.3479.2	chr14	-	3961	4	novel_in_catalog	SIX4	novel	6285	3	NA	NA	-29	1280	combination_of_known_junctions	FALSE	canonical	1	24676	junction_3	15889.385667447588	NA	0	NA	TRUE	NA	NA	NA	A	coding	773	2322	120	2441	65.0	-27	False	AATAAA	-35
PB.9835.1	chr6	-	2445	2	antisense	novelGene_HLA-K_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	B	coding	128	387	349	735	25.0	NA	False	NA	NA
PB.1433.6	chr10	+	1437	10	full-splice_match	HNRNPH3	ENST00000265866.11	2339	10	-11	913	-11	1	multi-exon	FALSE	canonical	1	841758	junction_1	537410.0367184984	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	177	1217	20.0	0	True	AATAAA	-18
PB.1433.7	chr10	+	1412	10	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	653847	junction_1	707277.1353530452	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	196	1191	25.0	0	True	AATAAA	-19
PB.1433.4	chr10	+	1392	10	full-splice_match	HNRNPH3	ENST00000354695.5	1332	10	-59	-1	-12	0	multi-exon	FALSE	canonical	1	698151	junction_4	672172.7165386793	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	178	1173	25.0	-1	True	AATAAA	-17
PB.1433.5	chr10	+	1456	10	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	653847	junction_1	584263.4322984035	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	196	1236	20.0	0	True	AATAAA	-18
PB.1433.2	chr10	+	2192	9	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	1	232878	junction_2	918514.1689569815	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	524	1057	20.0	-5	True	AATAAA	-17
PB.1433.3	chr10	+	2361	10	full-splice_match	HNRNPH3	ENST00000265866.11	2339	10	-15	-7	-15	3	multi-exon	FALSE	canonical	1	841758	junction_1	537410.0367184984	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	181	1221	20.0	-4	True	AATAAA	-22
PB.7529.25	chr21	+	2927	17	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	9081	junction_1	352309.4158642726	NA	1	NA	TRUE	NA	NA	NA	C	coding	662	1989	486	2474	15.0	-1	True	AATAAA	-15
PB.1433.1	chr10	+	2244	9	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-37	3	combination_of_known_junctions	FALSE	canonical	1	232878	junction_2	818361.5977446091	NA	2	NA	TRUE	NA	NA	NA	C	coding	211	636	469	1104	20.0	-9670	False	AATAAA	-22
PB.7529.29	chr21	+	1623	11	incomplete-splice_match	MX1	ENST00000398598.7	2850	17	73	15065	-1	-1337	3prime_fragment	FALSE	canonical	1	265969	junction_1	260466.2581805175	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	333	1397	15.0	-1	True	AATAAA	-26
PB.7529.28	chr21	+	2537	15	novel_in_catalog	MX1	novel	762	5	NA	NA	-1	-4	no_combination_of_known_junctions	FALSE	canonical	1	19935	junction_3	400016.8835458571	NA	1	1	TRUE	NA	NA	NA	C	coding	609	1830	257	2086	20.0	-1	True	AATAAA	-13
PB.9005.17	chr4	+	2948	21	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	248	10021	248	-753	3prime_fragment	FALSE	canonical	1	608699	junction_1	210357.7134778934	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2562	386	2947	60.0	9	True	NA	NA
PB.1433.8	chr10	+	2918	7	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-11	0	intron_retention	FALSE	canonical	1	841758	junction_1	631162.5296576197	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	2070	2699	25.0	0	True	AATAAA	-17
PB.1433.9	chr10	+	2223	10	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	90	2	combination_of_known_junctions	FALSE	canonical	1	653847	junction_1	584263.4322984035	NA	2	1	TRUE	NA	NA	NA	C	coding	346	1041	48	1088	20.0	-9496	False	AATAAA	-17
PB.8855.1	chr4	+	1782	11	full-splice_match	COPS4	ENST00000511653.1	1695	11	-53	-34	1	1	multi-exon	FALSE	canonical	1	20751	junction_9	241831.43088184381	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	54	1316	40.0	-29	True	AATAAA	-16
PB.9005.16	chr4	+	7686	24	full-splice_match	SMARCA5	ENST00000283131.3	7923	24	235	2	235	-2	multi-exon	FALSE	canonical	1	608699	junction_1	234989.39191122877	NA	2	NA	TRUE	NA	NA	NA	C	coding	995	2988	399	3386	30.0	-4	True	ATTAAA	-14
PB.11676.1	chr9	-	2896	6	novel_not_in_catalog	TRMO	novel	1647	5	NA	NA	-4	2204	intron_retention	FALSE	non_canonical	0	0	junction_1	50477.30905268227	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	28	1353	35.0	-21	True	NA	NA
PB.838.13	chr1	-	3629	9	novel_not_in_catalog	FCRL5	novel	5390	17	NA	NA	0	-594	any annotated donor/acceptor	FALSE	canonical	1	3312	junction_1	19989.662920807343	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	159	1901	75.0	-44	True	NA	NA
PB.838.12	chr1	-	3887	8	full-splice_match	FCRL5	ENST00000368189.3	4424	8	-57	594	8	-594	multi-exon	FALSE	canonical	1	5252	junction_6	18712.98811531931	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	151	1929	75.0	-36	True	NA	NA
PB.838.11	chr1	-	4209	8	full-splice_match	FCRL5	ENST00000368189.3	4424	8	-57	272	8	-272	multi-exon	FALSE	canonical	1	5252	junction_6	18712.98811531931	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	151	1929	85.0	-36	True	NA	NA
PB.517.16	chr1	+	4820	7	novel_not_in_catalog	HS2ST1	novel	1585	5	NA	NA	113	-1806	any annotated donor/acceptor	FALSE	canonical	1	45549	junction_6	101841.0996760258	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	251	1324	50.0	-140	False	AATAAA	-14
PB.8544.8	chr3	+	7310	30	novel_in_catalog	ATP11B	novel	7325	30	NA	NA	-23	-4	combination_of_known_junctions	FALSE	canonical	1	17462	junction_21	80578.62482180746	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	284	2812	35.0	-152	False	AATAAA	-18
PB.11278.7	chr8	-	2279	3	novel_in_catalog	ZNF706	novel	782	4	NA	NA	29	-1	intron_retention	FALSE	canonical	1	103246	junction_2	77988.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	62	189	222	410	40.0	19	True	AATAAA	-24
PB.838.14	chr1	-	3474	7	novel_not_in_catalog	FCRL5	novel	5390	17	NA	NA	-10	-602	any annotated donor/acceptor	FALSE	canonical	1	248	junction_5	21980.34667606496	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	116	730	65.0	-1	True	NA	NA
PB.849.15	chr1	-	2945	14	full-splice_match	DCAF8	ENST00000326837.6	3972	14	9	1018	9	-180	multi-exon	FALSE	canonical	1	74463	junction_13	235643.2934253198	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	293	2086	40.0	-17	True	ATTAAA	-22
PB.5457.4	chr18	+	2170	6	incomplete-splice_match	PIK3C3	ENST00000639914.1	2722	25	-26	78592	2	1324	3prime_fragment	FALSE	canonical	1	181952	junction_5	34857.916673260894	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	85	882	35.0	-38	True	AATAAA	-17
PB.8544.9	chr3	+	4608	30	full-splice_match	ATP11B	ENST00000323116.9	7325	30	138	2579	135	-7	multi-exon	FALSE	canonical	1	145463	junction_1	63025.3097420084	NA	2	NA	TRUE	NA	NA	NA	C	coding	1177	3534	123	3656	45.0	9	False	AATAAA	-14
PB.9005.13	chr4	+	2175	15	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	213	13955	213	-825	3prime_fragment	FALSE	canonical	1	608699	junction_1	104677.32118308304	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1755	421	2175	55.0	-26	True	NA	NA
PB.5457.5	chr18	+	5858	25	full-splice_match	PIK3C3	ENST00000262039.8	9443	25	12	3573	12	2778	multi-exon	FALSE	canonical	1	181952	junction_5	36178.90426600686	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	75	2738	35.0	-28	True	AATAAA	-20
PB.7654.1	chr22	-	3219	6	full-splice_match	DERL3	ENST00000476077.1	969	6	-22	-2228	-22	-3	multi-exon	FALSE	canonical	1	119211	junction_5	21639.25054155065	NA	4	NA	TRUE	NA	NA	NA	A	coding	205	618	48	665	20.0	-10	True	AAGAAA	-26
PB.9005.12	chr4	+	2845	20	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	213	10635	213	-1367	3prime_fragment	FALSE	canonical	1	608699	junction_1	166561.55741316866	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2424	421	2844	60.0	-26	True	NA	NA
PB.7527.6	chr21	+	4248	14	full-splice_match	MX2	ENST00000330714.7	3042	14	84	-1290	0	843	multi-exon	FALSE	canonical	1	30808	junction_1	68057.4055094268	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	101	2248	15.0	-1	True	NA	NA
PB.5264.1	chr17	-	2829	16	full-splice_match	SRP68	ENST00000307877.6	2649	16	137	-317	-9	-11	multi-exon	FALSE	canonical	1	641580	junction_15	181364.14352743488	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	26	1909	30.0	-10	True	AATAAA	-17
PB.5264.2	chr17	-	2446	17	novel_not_in_catalog	SRP68	novel	2037	9	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	272939.2173375958	NA	1	1	TRUE	NA	NA	NA	C	coding	526	1581	264	1844	20.0	12	True	ATTAAA	-18
PB.5264.3	chr17	-	2488	16	full-splice_match	SRP68	ENST00000307877.6	2649	16	156	5	0	-2	multi-exon	FALSE	canonical	1	641580	junction_15	181364.14352743488	NA	3	1	TRUE	NA	NA	NA	C	coding	627	1884	7	1890	15.0	9	True	ATTAAA	-14
PB.5264.4	chr17	-	2394	15	full-splice_match	SRP68	ENST00000592704.5	1941	15	-10	-443	0	-2	multi-exon	FALSE	canonical	1	5952	junction_14	285833.61276564054	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	216	1796	15.0	-1	True	ATTAAA	-14
PB.5264.5	chr17	-	2017	16	full-splice_match	SRP68	ENST00000307877.6	2649	16	136	496	-10	-48	multi-exon	FALSE	canonical	1	641580	junction_15	181364.14352743488	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	27	1910	30.0	-11	True	ATTAAA	-25
PB.842.2	chr1	-	2361	6	full-splice_match	AIM2	ENST00000368130.8	1529	6	67	-899	67	899	multi-exon	FALSE	canonical	1	59970	junction_5	18368.972175927538	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	223	1254	100.0	0	True	NA	NA
PB.7527.1	chr21	+	2956	14	full-splice_match	MX2	ENST00000330714.7	3042	14	85	1	1	-1	multi-exon	FALSE	canonical	1	30808	junction_1	68057.4055094268	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	100	2247	25.0	0	True	AATAAA	-24
PB.7527.8	chr21	+	3078	15	novel_in_catalog	MX2	novel	3042	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	7030	junction_1	86248.70705673902	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	222	2369	25.0	-1	True	AATAAA	-24
PB.7527.9	chr21	+	3522	15	novel_in_catalog	MX2	novel	3042	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	7030	junction_1	86248.70705673902	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	221	2368	40.0	0	True	AATAAA	-11
PB.790.4	chr1	+	3637	4	full-splice_match	ZBTB7B	ENST00000368426.3	3594	4	-43	0	-16	0	multi-exon	FALSE	canonical	1	77629	junction_1	240870.77861283955	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	181	1800	15.0	-6344	False	AAGAAA	-20
PB.790.5	chr1	+	2142	5	novel_in_catalog	ZBTB7B	novel	3777	3	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	1	13685	junction_2	249361.1696084617	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	233	1852	35.0	-15	True	NA	NA
PB.790.2	chr1	+	2122	4	full-splice_match	ZBTB7B	ENST00000368426.3	3594	4	-48	1520	-21	21	multi-exon	FALSE	canonical	1	77629	junction_1	240870.77861283955	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	186	1805	10.0	-6349	False	NA	NA
PB.5457.2	chr18	+	2961	25	full-splice_match	PIK3C3	ENST00000262039.8	9443	25	48	6434	0	0	multi-exon	FALSE	canonical	1	181952	junction_5	36178.90426600686	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	39	2702	35.0	8	True	AATAAA	-13
PB.790.1	chr1	+	3787	5	novel_not_in_catalog	ZBTB7B	novel	3777	3	NA	NA	-22	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	262718.42522128136	NA	1	1	TRUE	NA	NA	NA	C	coding	539	1620	331	1950	15.0	-6350	False	AAGAAA	-20
PB.5457.3	chr18	+	2453	22	novel_not_in_catalog	PIK3C3	novel	9443	25	NA	NA	-1	-32	any annotated donor/acceptor	FALSE	canonical	1	1170	junction_21	63079.88205963607	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	88	2427	55.0	-41	True	NA	NA
PB.915.5	chr1	+	1497	7	full-splice_match	TIPRL	ENST00000367833.6	3032	7	29	1506	29	-1506	multi-exon	FALSE	canonical	1	537375	junction_1	183468.80467050037	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	120	935	70.0	0	True	TTTAAA	-40
PB.6722.6	chr2	+	1738	6	full-splice_match	TSN	ENST00000389682.7	3420	6	116	1566	-10	302	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	132	818	65.0	-35	True	NA	NA
PB.849.13	chr1	-	3783	12	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	12	-181	intron_retention	FALSE	canonical	1	49053	junction_11	246618.95941618248	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	1207	2925	40.0	-14	True	ATTAAA	-21
PB.10173.2	chr6	-	2207	14	full-splice_match	HDAC2	ENST00000519065.5	9874	14	-76	7743	-76	-53	multi-exon	FALSE	canonical	1	736423	junction_13	481765.45923442964	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	172	1920	15.0	-1	True	ATTAAA	-18
PB.8544.7	chr3	+	3848	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	-27	7532	-27	0	3prime_fragment	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	288	3776	30.0	2	True	AATAAA	-24
PB.5252.7	chr17	+	2385	10	novel_in_catalog	SAP30BP	novel	2722	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	666325	junction_1	112784.41052548107	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	17	703	15.0	19	True	ATTAAA	-29
PB.5252.6	chr17	+	2367	12	novel_not_in_catalog	SAP30BP	novel	2722	11	NA	NA	1	-41	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	267968.1849600683	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	27	953	40.0	9	True	NA	NA
PB.5252.5	chr17	+	2121	11	full-splice_match	SAP30BP	ENST00000584667.5	2722	11	222	379	-8	-374	multi-exon	FALSE	canonical	1	666325	junction_1	111435.9167594093	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	36	962	25.0	0	True	AATAAA	-28
PB.5252.4	chr17	+	2453	11	full-splice_match	SAP30BP	ENST00000584667.5	2722	11	230	39	0	-34	multi-exon	FALSE	canonical	1	666325	junction_1	111435.9167594093	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	28	954	40.0	8	True	NA	NA
PB.5252.3	chr17	+	3581	8	novel_in_catalog	SAP30BP	novel	2722	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	666325	junction_1	125853.63359158162	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	38	529	15.0	-2	True	ATTAAA	-29
PB.5252.2	chr17	+	3070	5	incomplete-splice_match	SAP30BP	ENST00000577292.5	1097	6	-18	653	-13	-653	intron_retention	FALSE	canonical	1	666325	junction_1	106885.81290681192	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	41	460	50.0	-5	True	NA	NA
PB.5252.1	chr17	+	3488	9	novel_in_catalog	SAP30BP	novel	2722	11	NA	NA	-18	0	intron_retention	FALSE	canonical	1	17135	junction_6	301965.26759978436	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	46	537	15.0	-10	True	ATTAAA	-30
PB.7074.8	chr2	+	2561	5	full-splice_match	EIF4E2	ENST00000409167.7	1372	5	0	-1189	0	-1	multi-exon	FALSE	canonical	1	75891	junction_2	414373.9316227554	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	37	603	10.0	0	True	AATAAA	-13
PB.7074.7	chr2	+	2791	5	incomplete-splice_match	EIF4E2	ENST00000258416.7	1604	7	637	2	0	-2	intron_retention	FALSE	canonical	1	454063	junction_3	282636.30091371405	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	37	579	10.0	0	True	AATAAA	-12
PB.7074.6	chr2	+	3531	8	full-splice_match	EIF4E2	ENST00000409514.5	3525	8	-8	2	1	-2	multi-exon	FALSE	canonical	1	67045	junction_6	406651.780268513	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	51	761	25.0	-14	True	AATAAA	-16
PB.7074.5	chr2	+	2711	6	full-splice_match	EIF4E2	ENST00000409495.5	1014	6	-15	-1682	0	-1	multi-exon	FALSE	canonical	1	454063	junction_3	264140.46459518466	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	52	753	10.0	-15	True	AATAAA	-13
PB.8544.5	chr3	+	7249	30	full-splice_match	ATP11B	ENST00000323116.9	7325	30	69	7	66	-7	multi-exon	FALSE	canonical	1	145463	junction_1	63025.3097420084	NA	3	NA	TRUE	NA	NA	NA	C	coding	1177	3534	192	3725	30.0	2	True	AATAAA	-15
PB.7074.3	chr2	+	3325	6	full-splice_match	EIF4E2	ENST00000409394.5	604	6	-38	-2683	-8	-3	multi-exon	FALSE	canonical	1	75891	junction_2	436589.8767358675	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	60	629	30.0	-23	True	AATAAA	-15
PB.7074.2	chr2	+	998	7	full-splice_match	EIF4E2	ENST00000258416.7	1604	7	607	-1	-15	1	multi-exon	FALSE	canonical	1	329852	junction_6	303404.2311442772	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	67	804	5.0	-30	True	AATAAA	-15
PB.9381.19	chr5	-	2789	10	full-splice_match	PJA2	ENST00000361189.6	4889	10	-10	2110	-10	-2106	multi-exon	FALSE	canonical	1	437772	junction_9	178227.70248411282	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	251	2377	60.0	-1	True	AGTAAA	-16
PB.5252.8	chr17	+	2375	10	full-splice_match	SAP30BP	ENST00000355423.7	2439	10	22	42	2	-42	multi-exon	FALSE	canonical	1	33858	junction_2	277236.20184761024	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	6	884	40.0	-7359	False	NA	NA
PB.3090.5	chr13	-	4357	4	novel_in_catalog	HMGB1	novel	5485	5	NA	NA	5	-57	intron_retention	FALSE	canonical	1	6253	junction_3	170319.33602174735	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	153	677	40.0	-1	True	NA	NA
PB.3090.4	chr13	-	3312	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	73	2100	22	-57	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	112	759	40.0	40	False	NA	NA
PB.6293.1	chr2	+	3063	6	novel_in_catalog	RPS7	novel	787	7	NA	NA	3	0	intron_retention	FALSE	canonical	1	6118	junction_4	452456.7955022446	NA	2	NA	TRUE	NA	NA	NA	C	coding	119	360	107	466	10.0	-18	True	AATAAA	-19
PB.3090.6	chr13	-	3309	5	novel_not_in_catalog	HMGB1	novel	5485	5	NA	NA	2	-57	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	163111.22091536192	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	156	644	40.0	-4	True	NA	NA
PB.3090.1	chr13	-	4260	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	32	1193	5	850	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	5	NA	TRUE	NA	NA	NA	C	coding	215	648	153	800	25.0	-1	True	GATAAA	-33
PB.3090.3	chr13	-	3616	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	62	1807	11	236	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	24	NA	TRUE	NA	NA	NA	C	coding	215	648	123	770	65.0	29	False	NA	NA
PB.3090.2	chr13	-	3812	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	29	1644	2	399	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	156	803	90.0	-4	True	NA	NA
PB.462.2	chr1	-	6221	12	novel_not_in_catalog	SLC35D1	novel	6162	12	NA	NA	411	-50	any annotated donor/acceptor	TRUE	canonical	1	326	junction_11	33272.32907213286	NA	3	NA	TRUE	NA	NA	NA	C	coding	276	831	433	1263	55.0	683	False	AATAAA	-13
PB.7404.1	chr20	-	1693	3	novel_not_in_catalog	TCFL5	novel	2456	6	NA	NA	4210	-6359	any annotated donor/acceptor	FALSE	canonical	1	53080	junction_1	90381.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	55	168	143	310	40.0	4286	False	AATAAA	-13
PB.3090.9	chr13	-	2736	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	32	2717	5	429	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	3	NA	TRUE	NA	NA	NA	C	coding	215	648	153	800	40.0	-1	True	NA	NA
PB.462.3	chr1	-	5126	12	full-splice_match	SLC35D1	ENST00000235345.5	6162	12	63	973	63	-973	multi-exon	FALSE	canonical	1	75700	junction_2	14631.320808852844	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	24	1091	95.0	-6	True	AATAAA	-42
PB.418.1	chr1	-	628	5	full-splice_match	MAGOH	ENST00000371470.7	756	5	92	36	-10	-2	multi-exon	FALSE	canonical	1	404008	junction_1	270499.1072650472	NA	0	NA	TRUE	NA	NA	NA	A	coding	146	441	71	511	40.0	-1	True	AATAAA	-16
PB.3218.68	chr13	-	2340	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1970	junction_2	106659.93532535718	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	429	1670	85.0	-2	True	NA	NA
PB.3218.69	chr13	-	2379	9	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	245	junction_1	107065.89665948723	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	428	1831	85.0	-1	True	NA	NA
PB.3218.66	chr13	-	2374	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-69	combination_of_known_junctions	FALSE	canonical	1	1567	junction_3	114256.2796368079	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	428	1699	40.0	-1	True	AATAAA	-13
PB.3218.67	chr13	-	2357	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-68	no_combination_of_known_junctions	FALSE	canonical	1	3411	junction_4	116174.86256480194	NA	10	2	TRUE	NA	NA	NA	C	coding	562	1689	428	2116	40.0	-1	True	AATAAA	-14
PB.3218.64	chr13	-	2535	11	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	118556.00861065627	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	428	1819	85.0	-1	True	NA	NA
PB.3218.65	chr13	-	2469	11	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	899	junction_3	120065.20882920249	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	428	1753	85.0	-1	True	NA	NA
PB.3218.62	chr13	-	2196	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	91	-69	no_combination_of_known_junctions	FALSE	canonical	1	8119	junction_2	105381.98686652999	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	324	1595	40.0	4	True	AATAAA	-13
PB.3218.63	chr13	-	1997	8	full-splice_match	DCT	ENST00000377028.9	5064	8	217	2850	217	-69	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	198	1757	40.0	1680	False	AATAAA	-13
PB.3218.60	chr13	-	3694	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	8759	junction_2	105250.3415478425	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	427	1716	85.0	0	True	NA	NA
PB.3218.61	chr13	-	3443	8	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1660	junction_6	89242.38252955275	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	2523	3134	85.0	-1	True	NA	NA
PB.7797.1	chr22	+	4994	2	novel_not_in_catalog	MGAT3	novel	5062	2	NA	NA	-10195	-3	any annotated donor/acceptor	FALSE	canonical	1	3318	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	533	1602	151	1752	15.0	-9891	False	AATAAA	-17
PB.7797.3	chr22	+	5019	3	novel_not_in_catalog	MGAT3	novel	5062	2	NA	NA	-10142	-5	any annotated donor/acceptor	FALSE	canonical	1	1903	junction_2	7935.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	531	1596	184	1779	15.0	11	True	AATAAA	-15
PB.7797.2	chr22	+	5106	3	novel_not_in_catalog	MGAT3	novel	5062	2	NA	NA	-10165	-2	any annotated donor/acceptor	FALSE	canonical	1	17774	junction_1	1972.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	575	1728	136	1863	15.0	-12	True	AATAAA	-18
PB.7476.1	chr21	-	5182	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	0	9	0	-9	multi-exon	TRUE	canonical	1	484680	junction_4	99750.47215356615	NA	2	NA	TRUE	NA	NA	NA	C	coding	950	2853	507	3359	20.0	-1	True	ATTAAA	-15
PB.7476.3	chr21	-	3970	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	679	542	679	-2	multi-exon	FALSE	canonical	1	484680	junction_4	99750.47215356615	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	563	2680	10.0	678	False	AATAAA	-14
PB.7476.2	chr21	-	4862	8	novel_in_catalog	ADAMTS1	novel	5191	9	NA	NA	1	-2	intron_retention	FALSE	canonical	1	495180	junction_3	99660.17916471382	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	455	2167	10.0	0	True	AATAAA	-14
PB.7476.5	chr21	-	4019	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	0	1172	0	-632	multi-exon	FALSE	canonical	1	484680	junction_4	99750.47215356615	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	456	3359	50.0	-1	True	NA	NA
PB.7476.4	chr21	-	4461	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	0	730	0	-190	multi-exon	FALSE	canonical	1	484680	junction_4	99750.47215356615	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	456	3359	15.0	-1	True	AGTAAA	-31
PB.7476.7	chr21	-	3672	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	0	1519	0	827	multi-exon	FALSE	canonical	1	484680	junction_4	99750.47215356615	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	456	3359	60.0	-1	True	AAAACA	-12
PB.7476.6	chr21	-	3946	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	0	1245	0	-705	multi-exon	FALSE	canonical	1	484680	junction_4	99750.47215356615	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	456	3359	40.0	-1	True	ATTAAA	-41
PB.2938.1	chr12	+	2764	3	novel_in_catalog	PEBP1	novel	1697	4	NA	NA	210	58	intron_retention	FALSE	canonical	1	894227	junction_1	294167.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	143	664	95.0	-9370	False	NA	NA
PB.7476.8	chr21	-	3239	9	full-splice_match	ADAMTS1	ENST00000284984.7	5191	9	0	1952	0	394	multi-exon	FALSE	canonical	1	484680	junction_4	99750.47215356615	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2784	456	3239	55.0	-1	True	NA	NA
PB.2938.3	chr12	+	2361	4	novel_not_in_catalog	PEBP1	novel	1697	4	NA	NA	237	59	any annotated donor/acceptor	FALSE	canonical	1	784	junction_1	609192.9549966542	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	116	637	100.0	-29	True	NA	NA
PB.2938.2	chr12	+	1469	4	full-splice_match	PEBP1	ENST00000261313.2	1697	4	226	2	226	-2	multi-exon	FALSE	canonical	1	894227	junction_2	243680.56038319238	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	127	690	30.0	-9354	False	AATAAA	-17
PB.2938.4	chr12	+	1023	4	full-splice_match	PEBP1	ENST00000261313.2	1697	4	258	416	258	59	multi-exon	FALSE	canonical	1	894227	junction_2	243680.56038319238	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	95	658	100.0	-8	True	NA	NA
PB.4532.1	chr16	+	4326	26	full-splice_match	SF3B3	ENST00000302516.9	9720	26	23	5371	-2	-2	multi-exon	FALSE	canonical	1	528449	junction_3	315667.86521637323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	189	3842	15.0	-5	True	AATAGA	-19
PB.8335.5	chr3	-	2290	15	full-splice_match	IQCB1	ENST00000310864.10	2594	15	68	236	5	-5	multi-exon	FALSE	canonical	1	80216	junction_7	63253.85840502103	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	148	1944	40.0	46	True	AATAAA	-21
PB.4532.3	chr16	+	4384	27	novel_in_catalog	SF3B3	novel	9720	26	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	49332	junction_11	409603.130956703	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	1942	3894	10.0	-28	True	AATAGA	-25
PB.4532.2	chr16	+	4455	27	novel_not_in_catalog	SF3B3	novel	9720	26	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	6280	junction_12	452539.19292765885	NA	0	NA	TRUE	NA	NA	NA	C	coding	1201	3606	366	3971	15.0	-28	True	AATAGA	-19
PB.4532.5	chr16	+	4223	25	novel_in_catalog	SF3B3	novel	9720	26	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	2688	junction_20	379898.6941702331	NA	0	NA	TRUE	NA	NA	NA	C	coding	1175	3528	212	3739	15.0	-28	True	AATAGA	-19
PB.4532.4	chr16	+	4386	27	novel_not_in_catalog	SF3B3	novel	9720	26	NA	NA	0	-116	any annotated donor/acceptor	FALSE	canonical	1	5352	junction_1	411571.7010268965	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	363	4016	25.0	-28	True	AATACA	-16
PB.4532.7	chr16	+	4483	27	novel_in_catalog	SF3B3	novel	9720	26	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	11948	junction_1	410955.9120176181	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	346	3999	15.0	-8	True	AATAGA	-19
PB.4532.6	chr16	+	6896	26	full-splice_match	SF3B3	ENST00000302516.9	9720	26	20	2804	-5	2565	multi-exon	FALSE	canonical	1	528449	junction_3	315667.86521637323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	192	3845	35.0	-8	True	AGTAAA	-44
PB.4532.9	chr16	+	4130	26	novel_in_catalog	SF3B3	novel	9720	26	NA	NA	3	-118	no_combination_of_known_junctions	FALSE	canonical	1	10826	junction_7	457354.0953975788	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	1810	3762	20.0	0	True	AATACA	-14
PB.4532.8	chr16	+	4214	27	novel_in_catalog	SF3B3	novel	9720	26	NA	NA	3	-138	combination_of_known_junctions	FALSE	canonical	1	49332	junction_11	409603.130956703	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	1914	3866	40.0	0	True	NA	NA
PB.8335.8	chr3	-	1630	9	incomplete-splice_match	IQCB1	ENST00000393650.7	2253	14	41	26544	-4	650	3prime_fragment	FALSE	canonical	1	80216	junction_1	56506.50724916556	NA	1	1	TRUE	NA	NA	NA	C	coding	305	918	175	1092	30.0	19	True	AATAAA	-16
PB.1090.25	chr1	+	4969	11	novel_not_in_catalog	CD46	novel	3371	14	NA	NA	18	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	610680.1234276501	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	128	652	25.0	-26	True	AATAAA	-14
PB.7342.2	chr20	-	4174	14	novel_not_in_catalog	STAU1	novel	3684	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	142	junction_13	339001.57855955453	NA	7	NA	TRUE	NA	NA	NA	C	coding	496	1491	1146	2636	10.0	-1	True	AATAAA	-14
PB.9566.1	chr5	-	2330	11	full-splice_match	RBM22	ENST00000199814.8	2342	11	14	-2	14	2	multi-exon	FALSE	canonical	1	313467	junction_4	128499.55729947088	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	109	1371	15.0	-32	True	ATTAAA	-17
PB.9566.3	chr5	-	1959	11	full-splice_match	RBM22	ENST00000199814.8	2342	11	22	361	-8	-361	multi-exon	FALSE	canonical	1	313467	junction_4	128499.55729947088	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	101	1363	85.0	-24	True	NA	NA
PB.9566.2	chr5	-	3495	10	novel_in_catalog	RBM22	novel	2067	4	NA	NA	20	1	intron_retention	FALSE	canonical	1	337665	junction_8	120842.82609496222	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	10	774	20.0	67	True	ATTAAA	-16
PB.6283.1	chr19	+	1687	2	full-splice_match	CENPBD1P1	ENST00000493504.1	3282	2	-43	1638	-28	1113	multi-exon	FALSE	canonical	1	159816	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	950	1537	30.0	-3	True	AATACA	-21
PB.6283.2	chr19	+	3002	2	full-splice_match	CENPBD1P1	ENST00000493504.1	3282	2	63	217	63	-217	multi-exon	FALSE	canonical	1	159816	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	844	1431	85.0	-269	False	NA	NA
PB.6283.3	chr19	+	3297	2	full-splice_match	CENPBD1P1	ENST00000493504.1	3282	2	-18	3	-3	-3	multi-exon	FALSE	canonical	1	159816	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	195	588	925	1512	15.0	-10	True	NA	NA
PB.6607.1	chr2	+	4691	26	novel_in_catalog	KDM3A	novel	709	4	NA	NA	60	0	intron_retention	TRUE	canonical	1	1127	junction_1	126246.72710020485	NA	2	NA	TRUE	NA	NA	NA	C	coding	1321	3966	133	4098	25.0	-6611	False	ATTAAA	-11
PB.11307.12	chr8	-	3636	14	novel_not_in_catalog	RAD21	novel	3749	14	NA	NA	106	-1	any annotated donor/acceptor	FALSE	canonical	1	1057	junction_3	545240.1866724349	NA	16	1	TRUE	NA	NA	NA	C	coding	629	1890	183	2072	20.0	15	True	AATAAA	-18
PB.10454.1	chr7	-	2604	4	novel_in_catalog	HOXA3	novel	3263	3	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	1	8651	junction_3	14755.744832286699	NA	0	NA	TRUE	NA	NA	NA	B	coding	443	1332	369	1700	30.0	3467	False	AATAAA	-17
PB.369.2	chr1	-	1673	12	full-splice_match	EIF2B3	ENST00000360403.6	1659	12	-68	54	44	-54	multi-exon	FALSE	canonical	1	327203	junction_1	54880.72958005997	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	196	1554	30.0	5576	False	AATAAA	-27
PB.369.3	chr1	-	1472	10	full-splice_match	EIF2B3	ENST00000372183.7	1457	10	-12	-3	0	3	multi-exon	FALSE	canonical	1	333522	junction_4	54204.04362529915	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	117	1355	50.0	-5	True	NA	NA
PB.11307.16	chr8	-	3180	14	full-splice_match	RAD21	ENST00000297338.6	3749	14	52	517	52	453	multi-exon	FALSE	canonical	1	430119	junction_13	466275.78548679256	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	237	2132	65.0	-39	True	NA	NA
PB.369.1	chr1	-	3024	12	full-splice_match	EIF2B3	ENST00000360403.6	1659	12	17	-1382	2	1126	multi-exon	FALSE	canonical	1	327203	junction_1	54880.72958005997	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	111	1469	20.0	1	True	NA	NA
PB.11307.18	chr8	-	2381	14	novel_in_catalog	RAD21	novel	3749	14	NA	NA	-44	74	combination_of_known_junctions	FALSE	canonical	1	55919	junction_13	515931.05413081363	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	139	2034	45.0	-1	True	NA	NA
PB.11307.19	chr8	-	2311	14	full-splice_match	RAD21	ENST00000297338.6	3749	14	43	1395	43	4	multi-exon	FALSE	canonical	1	430119	junction_13	466275.78548679256	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	246	2141	35.0	-48	True	ATTAAA	-18
PB.9863.6	chr6	+	2652	5	novel_not_in_catalog	TCF19	novel	3290	4	NA	NA	-14	-437	any annotated donor/acceptor	FALSE	canonical	1	2370	junction_3	127266.60085918065	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	769	1260	30.0	-61	True	AATAAA	-24
PB.7787.2	chr22	+	1336	4	full-splice_match	APOBEC3C	ENST00000361441.4	2818	4	144	1338	-35	88	multi-exon	FALSE	canonical	1	687980	junction_1	22576.802312698463	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	137	709	45.0	-6900	False	AATAAA	-4
PB.7787.3	chr22	+	2644	4	full-splice_match	APOBEC3C	ENST00000361441.4	2818	4	173	1	-6	-1	multi-exon	FALSE	canonical	1	687980	junction_1	22576.802312698463	NA	2	NA	TRUE	NA	NA	NA	C	coding	190	573	108	680	20.0	-1	True	NA	NA
PB.6722.7	chr2	+	3586	6	full-splice_match	TSN	ENST00000409193.1	1436	6	-520	-1630	-8	-3	multi-exon	FALSE	canonical	1	7473	junction_1	312102.22319451685	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	991	1662	25.0	-33	True	AATAAA	-20
PB.7787.1	chr22	+	1110	4	full-splice_match	APOBEC3C	ENST00000361441.4	2818	4	174	1534	-5	-108	multi-exon	FALSE	canonical	1	687980	junction_1	22576.802312698463	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	107	679	100.0	0	True	NA	NA
PB.7674.1	chr22	+	2818	2	incomplete-splice_match	MIATNB	ENST00000421253.1	592	3	-93	-1453	-4	1453	intron_retention	FALSE	canonical	1	30516	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	707	1189	80.0	-27	True	NA	NA
PB.7787.4	chr22	+	1597	5	novel_not_in_catalog	APOBEC3C	novel	2818	4	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	311266.65750928095	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	107	679	20.0	0	True	NA	NA
PB.7674.2	chr22	+	3385	1	full-splice_match	RF01877	ENST00000613656.1	377	1	-163	-2845	-163	2845	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	66	201	110	310	30.0	-2131	False	ATTAAA	-17
PB.11149.2	chr8	+	2942	8	full-splice_match	RAB2A	ENST00000262646.11	3848	8	322	584	-2	-584	multi-exon	FALSE	canonical	1	886578	junction_3	286603.831760776	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	30	668	50.0	0	True	NA	NA
PB.12303.6	chrX	-	5787	9	novel_not_in_catalog	IDS	novel	7619	9	NA	NA	7	-1781	any annotated donor/acceptor	FALSE	canonical	1	10179	junction_7	352850.36085596896	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	430	1812	5.0	-35	True	AATAAA	-17
PB.12303.5	chrX	-	5620	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	-1780	no_combination_of_known_junctions	FALSE	canonical	1	19218	junction_6	369597.79046290467	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	625	1644	5.0	-1	True	AATAAA	-18
PB.12303.4	chrX	-	5647	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	18	-1780	no_combination_of_known_junctions	FALSE	canonical	1	43426	junction_1	379955.59974082257	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	193	1671	5.0	-24	True	AATAAA	-18
PB.11149.6	chr8	+	1901	8	full-splice_match	RAB2A	ENST00000262646.11	3848	8	315	1632	-4	1007	multi-exon	FALSE	canonical	1	886578	junction_3	286603.831760776	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	37	675	25.0	-7	True	AATAAA	-12
PB.12303.2	chrX	-	5946	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	24	-1779	combination_of_known_junctions	TRUE	canonical	1	56250	junction_3	411700.0325144451	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	187	1125	5.0	-18	True	AATAAA	-19
PB.12303.1	chrX	-	5732	9	full-splice_match	IDS	ENST00000340855.10	7619	9	13	1874	13	-1874	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	198	1850	10.0	-29	True	TTTAAA	-23
PB.11149.5	chr8	+	1798	8	full-splice_match	RAB2A	ENST00000262646.11	3848	8	309	1741	-10	898	multi-exon	FALSE	canonical	1	886578	junction_3	286603.831760776	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	43	681	45.0	-13	False	AATAAA	-31
PB.8476.1	chr3	+	4004	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	-87	4434	-87	-4434	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	183	552	512	1063	40.0	-2006	False	AATAAA	-17
PB.8476.2	chr3	+	3700	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	-39	4690	-39	-4690	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	183	552	464	1015	15.0	-10	True	AAGAAA	-16
PB.8476.3	chr3	+	6273	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	-54	2132	-54	-2132	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	13	NA	NA	NA	NA	NA	C	coding	183	552	479	1030	15.0	-25	True	AATAAA	-28
PB.8476.4	chr3	+	2475	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	-29	5905	-29	-5905	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	183	552	454	1005	65.0	0	True	AATACA	-13
PB.8476.5	chr3	+	1879	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	-42	6514	-42	-6514	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	183	552	467	1018	20.0	-13	True	NA	NA
PB.8476.6	chr3	+	4939	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	-41	3453	-41	-3453	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	183	552	466	1017	30.0	-12	True	AGTAAA	-13
PB.12303.8	chrX	-	5927	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	13	-1782	combination_of_known_junctions	FALSE	canonical	1	56236	junction_7	416552.350987318	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	934	1953	5.0	-29	True	AATAAA	-16
PB.11123.20	chr8	-	1972	7	incomplete-splice_match	PRKDC	ENST00000338368.7	12784	85	177785	-620	614	-7	5prime_fragment	FALSE	canonical	1	93271	junction_6	418149.9791005681	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	6	914	30.0	-8651	False	AATAAA	-11
PB.11123.23	chr8	-	10826	76	incomplete-splice_match	PRKDC	ENST00000338368.7	12784	85	28	15271	28	-6592	3prime_fragment	FALSE	canonical	1	333026	junction_75	154296.6408511432	NA	0	NA	TRUE	NA	NA	NA	C	coding	3600	10800	25	10824	75.0	-15	True	NA	NA
PB.915.3	chr1	+	2780	6	incomplete-splice_match	TIPRL	ENST00000367833.6	3032	7	4969	3	4847	-3	5prime_fragment	FALSE	canonical	1	754298	junction_2	146347.02494331752	NA	3	NA	TRUE	NA	NA	NA	C	coding	231	696	20	715	30.0	-888	False	AATAAA	-20
PB.858.31	chr1	-	1426	3	incomplete-splice_match	SLAMF1	ENST00000538290.2	1087	8	-67	23202	-4	3044	3prime_fragment	FALSE	canonical	1	227876	junction_2	5605.0	NA	1	1	TRUE	NA	NA	NA	C	coding	301	906	81	986	25.0	-4	True	AATAAA	-29
PB.11123.27	chr8	-	5930	43	incomplete-splice_match	PRKDC	ENST00000338368.7	12784	85	27	88652	27	-18	3prime_fragment	FALSE	canonical	1	333026	junction_42	115984.2862990984	NA	0	NA	TRUE	NA	NA	NA	C	coding	1968	5904	26	5929	55.0	-16	True	NA	NA
PB.488.4	chr1	+	2811	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	-7	184	-7	-184	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	265	1278	5.0	-15	True	NA	NA
PB.11123.29	chr8	-	2056	18	incomplete-splice_match	PRKDC	ENST00000338368.7	12784	85	27	156139	27	-3041	3prime_fragment	FALSE	canonical	1	333026	junction_17	73049.4464996829	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2031	26	2056	60.0	-16	True	AAGAAA	-5
PB.11123.28	chr8	-	2536	22	incomplete-splice_match	PRKDC	ENST00000338368.7	12784	85	42	144542	42	8556	3prime_fragment	FALSE	canonical	1	333026	junction_21	113536.36928508816	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2526	11	2536	25.0	-1	True	AATAAA	-43
PB.1081.6	chr1	-	2081	7	full-splice_match	FCMR	ENST00000442471.4	1441	7	51	-691	-6	518	multi-exon	FALSE	canonical	1	35937	junction_6	130544.70886815836	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	94	930	15.0	-7	True	AATAGA	-17
PB.11407.1	chr8	+	2213	4	full-splice_match	LRRC14	ENST00000292524.5	5328	4	-47	3162	-32	-8	multi-exon	FALSE	canonical	1	39681	junction_1	73359.43170899477	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	194	1675	20.0	-4584	False	NA	NA
PB.11407.3	chr8	+	2169	5	novel_in_catalog	LRRC14	novel	978	3	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	1	14946	junction_2	88747.25340820414	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	150	1631	20.0	-19	True	NA	NA
PB.11407.2	chr8	+	2133	4	novel_in_catalog	LRRC14	novel	978	3	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	1	50234	junction_1	68385.77504292996	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	108	1589	10.0	-4584	False	NA	NA
PB.11407.4	chr8	+	1961	4	novel_not_in_catalog	LRRC14	novel	978	3	NA	NA	1	-8	any annotated donor/acceptor	FALSE	canonical	1	7764	junction_1	88402.734192256	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	59	1423	20.0	-11	True	NA	NA
PB.780.41	chr1	-	5946	11	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	5	3	intron_retention	TRUE	non_canonical	0	0	junction_1	441591.18306410965	NA	2	NA	TRUE	NA	NA	NA	C	coding	957	2874	176	3049	85.0	4	True	AATATA	-11
PB.36.1	chr1	-	2840	6	full-splice_match	PEX10	ENST00000447513.6	1997	6	8	-851	8	-4	multi-exon	TRUE	canonical	1	75111	junction_5	100628.41216555094	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	62	1042	35.0	-21	True	AGTAAA	-23
PB.10607.12	chr7	+	4737	33	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-3	99	intron_retention	FALSE	canonical	1	3722	junction_22	556935.4419565544	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	644	3517	15.0	-4860	False	ACTAAA	-14
PB.10607.13	chr7	+	4362	34	full-splice_match	GTF2I	ENST00000614986.4	4415	34	51	2	51	0	multi-exon	FALSE	canonical	1	3722	junction_22	539596.0995220877	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	266	3202	15.0	-4733	False	AATAAA	-25
PB.10607.10	chr7	+	3379	34	full-splice_match	GTF2I	ENST00000614986.4	4415	34	-33	1069	-33	-336	multi-exon	FALSE	canonical	1	3722	junction_22	539596.0995220877	NA	1	NA	TRUE	NA	NA	NA	C	coding	978	2937	350	3286	45.0	7	True	NA	NA
PB.10607.11	chr7	+	2384	18	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-77	16808	-4	2	3prime_fragment	FALSE	canonical	1	7040	junction_15	545462.9761276067	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	394	2028	85.0	-4861	False	NA	NA
PB.10607.17	chr7	+	3917	33	full-splice_match	GTF2I	ENST00000620879.4	4352	33	-35	470	-35	263	multi-exon	FALSE	canonical	1	3722	junction_21	551517.8779255119	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	352	3225	30.0	5	True	AATAAA	-17
PB.5151.9	chr17	+	1883	11	novel_in_catalog	VMP1	novel	231	2	NA	NA	-5	274	no_combination_of_known_junctions	FALSE	canonical	1	3966	junction_6	405743.0797705489	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	117	1205	20.0	-6	True	TATAAA	-19
PB.5151.8	chr17	+	2392	12	full-splice_match	VMP1	ENST00000262291.8	2712	12	194	126	-5	-126	multi-exon	FALSE	canonical	1	629249	junction_3	296524.89311822853	NA	4	NA	TRUE	NA	NA	NA	C	coding	406	1221	117	1337	5.0	-6	True	NA	NA
PB.5151.7	chr17	+	1774	12	full-splice_match	VMP1	ENST00000262291.8	2712	12	187	751	1	26	multi-exon	FALSE	canonical	1	629249	junction_3	296524.89311822853	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	124	1344	25.0	-13	True	TATAAA	-16
PB.5151.6	chr17	+	2061	13	novel_in_catalog	VMP1	novel	231	2	NA	NA	1	274	combination_of_known_junctions	FALSE	canonical	1	23363	junction_11	424883.5443009567	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	124	1383	20.0	-13	True	TATAAA	-19
PB.5151.5	chr17	+	3021	8	novel_not_in_catalog	VMP1	novel	231	2	NA	NA	-1	11182	any annotated donor/acceptor	FALSE	canonical	1	1193	junction_7	285152.51551628526	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	127	858	40.0	-16	True	AATAAA	-30
PB.5151.4	chr17	+	1895	11	novel_in_catalog	VMP1	novel	231	2	NA	NA	-6	273	combination_of_known_junctions	TRUE	canonical	1	3039	junction_2	402264.3242228299	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	574	1218	20.0	-23	True	TATAAA	-18
PB.5151.3	chr17	+	3433	1	novel_in_catalog	VMP1	novel	2712	12	NA	NA	-8	3396	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-25	True	NA	NA
PB.5151.2	chr17	+	2524	12	full-splice_match	VMP1	ENST00000262291.8	2712	12	190	-2	4	2	multi-exon	FALSE	canonical	1	629249	junction_3	296524.89311822853	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	121	1341	30.0	-10	True	AATAAA	-22
PB.5151.1	chr17	+	1998	12	full-splice_match	VMP1	ENST00000262291.8	2712	12	211	503	5	274	multi-exon	FALSE	canonical	1	629249	junction_3	296524.89311822853	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	100	1320	20.0	11	True	TATAAA	-19
PB.7215.1	chr20	+	3487	8	novel_in_catalog	GINS1	novel	3249	7	NA	NA	-63	12	combination_of_known_junctions	FALSE	canonical	1	994	junction_1	86990.6421204638	NA	2	NA	TRUE	NA	NA	NA	C	coding	161	486	426	911	15.0	-65	True	NA	NA
PB.4176.4	chr16	+	1948	13	incomplete-splice_match	CCNF	ENST00000397066.8	4283	17	48	8518	-7	461	3prime_fragment	FALSE	canonical	1	75092	junction_1	42260.52379848388	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	41	1531	100.0	-5	True	NA	NA
PB.4176.1	chr16	+	3234	17	full-splice_match	CCNF	ENST00000397066.8	4283	17	25	1024	25	-1021	multi-exon	FALSE	canonical	1	75092	junction_1	41071.454253342126	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	64	2424	55.0	-28	False	ATTAAA	-39
PB.4176.3	chr16	+	4236	17	full-splice_match	CCNF	ENST00000397066.8	4283	17	46	1	-9	-1	multi-exon	FALSE	canonical	1	75092	junction_1	41071.454253342126	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	43	2403	25.0	-7	True	NA	NA
PB.4176.2	chr16	+	3164	17	full-splice_match	CCNF	ENST00000397066.8	4283	17	21	1098	21	-1095	multi-exon	FALSE	canonical	1	75092	junction_1	41071.454253342126	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	68	2428	75.0	-32	False	NA	NA
PB.1015.8	chr1	+	5316	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	44	582	5	-582	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	200	1795	50.0	-32	True	AATAAA	-30
PB.676.2	chr1	+	2001	6	novel_in_catalog	NUDT17	novel	1473	8	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	177	534	12	545	20.0	0	True	AATAAA	-19
PB.676.1	chr1	+	2031	5	novel_in_catalog	NUDT17	novel	1473	8	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	19	1	TRUE	NA	NA	NA	B	coding	117	354	1206	1559	20.0	-6	True	AATAAA	-19
PB.3419.1	chr14	-	2032	1	antisense	novelGene_ARF6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	104	315	290	604	40.0	-40	False	AATAAA	-14
PB.8276.12	chr3	+	3393	8	full-splice_match	NXPE3	ENST00000491511.6	8074	8	222	4459	169	108	multi-exon	FALSE	canonical	1	18008	junction_1	59981.7256561853	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	735	2414	5.0	0	True	ACTAAA	-10
PB.11112.8	chr8	+	3347	7	incomplete-splice_match	VDAC3	ENST00000022615.8	1355	10	-21	1175	-5	-693	intron_retention	FALSE	canonical	1	497340	junction_4	590880.1701407448	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	90	644	100.0	2	True	NA	NA
PB.9719.16	chr6	-	2253	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	52	7364	19	175	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	2	NA	TRUE	NA	NA	NA	C	coding	286	861	36	896	75.0	43	True	NA	NA
PB.11112.6	chr8	+	2677	9	novel_in_catalog	VDAC3	novel	719	6	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	1	497340	junction_4	540153.1100229678	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	98	652	20.0	-6	True	AATAAA	-25
PB.67.8	chr1	-	3830	13	novel_in_catalog	RERE	novel	8026	24	NA	NA	-30	-379	combination_of_known_junctions	FALSE	canonical	1	38390	junction_12	160551.84580498876	NA	1	NA	TRUE	NA	NA	NA	C	coding	986	2961	788	3748	60.0	3	True	CATAAA	-12
PB.9236.8	chr5	-	3132	1	intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-1	True	ATTAAA	-19
PB.11112.5	chr8	+	2458	10	novel_not_in_catalog	VDAC3	novel	719	6	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	1	2179	junction_7	598846.6037453442	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	100	654	20.0	-8	True	AATAAA	-24
PB.11112.2	chr8	+	1357	9	novel_in_catalog	VDAC3	novel	719	6	NA	NA	-6	-3	no_combination_of_known_junctions	TRUE	canonical	1	5321	junction_8	623911.8430944391	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	132	845	20.0	-66	False	AATAAA	-24
PB.11112.3	chr8	+	2522	7	incomplete-splice_match	VDAC3	ENST00000022615.8	1355	10	-41	2020	-2	436	intron_retention	FALSE	canonical	1	497340	junction_4	590880.1701407448	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	110	664	100.0	-18	True	NA	NA
PB.11112.1	chr8	+	1359	10	full-splice_match	VDAC3	ENST00000022615.8	1355	10	-2	-2	-1	2	multi-exon	FALSE	canonical	1	497340	junction_4	509617.85669569223	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	71	922	10.0	-5	True	AATAAA	-29
PB.2287.16	chr11	-	3392	24	novel_in_catalog	USP28	novel	4669	25	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	1	51830	junction_23	51339.336227568565	NA	1	NA	TRUE	NA	NA	NA	C	coding	1045	3138	69	3206	45.0	0	True	AATAAA	-27
PB.2287.17	chr11	-	3315	23	novel_in_catalog	USP28	novel	4669	25	NA	NA	0	8	no_combination_of_known_junctions	FALSE	canonical	1	3661	junction_22	54801.49511804905	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	70	3129	45.0	-1	True	AATAAA	-27
PB.2287.14	chr11	-	4186	23	novel_in_catalog	USP28	novel	4669	25	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	2187	junction_21	60329.77850296603	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	276	3038	100.0	-2	True	NA	NA
PB.2287.15	chr11	-	4146	22	full-splice_match	USP28	ENST00000545540.5	3431	22	-2	-713	-2	0	multi-exon	FALSE	canonical	1	11017	junction_21	54065.71154163608	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	236	2998	100.0	-3	True	NA	NA
PB.2287.12	chr11	-	4347	24	novel_in_catalog	USP28	novel	4669	25	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	51830	junction_23	51339.336227568565	NA	0	NA	TRUE	NA	NA	NA	C	coding	1045	3138	62	3199	100.0	7	True	NA	NA
PB.2287.13	chr11	-	4275	23	novel_in_catalog	USP28	novel	4669	25	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	3661	junction_22	54801.49511804905	NA	1	NA	TRUE	NA	NA	NA	C	coding	1019	3060	68	3127	100.0	1	True	NA	NA
PB.2287.10	chr11	-	4719	25	novel_in_catalog	USP28	novel	4669	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6276	junction_24	63939.76045943068	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	443	3571	100.0	-2	True	NA	NA
PB.2287.11	chr11	-	4443	25	full-splice_match	USP28	ENST00000003302.8	4669	25	8	218	4	0	multi-exon	FALSE	canonical	1	18976	junction_7	64693.212331517694	NA	1	NA	TRUE	NA	NA	NA	C	coding	1077	3234	62	3295	100.0	7	True	NA	NA
PB.11549.18	chr9	+	4168	7	full-splice_match	DCAF10	ENST00000377724.7	3862	7	334	-640	282	640	multi-exon	FALSE	canonical	1	129259	junction_1	29655.222495371705	NA	2	NA	TRUE	NA	NA	NA	C	coding	559	1680	32	1711	50.0	39	False	AGTAAA	-15
PB.2287.18	chr11	-	3185	22	novel_not_in_catalog	USP28	novel	4669	25	NA	NA	-8	6	any annotated donor/acceptor	FALSE	canonical	1	25	junction_21	55728.689280401755	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	239	3001	40.0	-9	False	AATAAA	-25
PB.2287.19	chr11	-	2112	7	incomplete-splice_match	USP28	ENST00000542033.5	852	8	-29	1245	4	-1245	3prime_fragment	FALSE	canonical	1	51830	junction_6	67161.85872369989	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	62	844	85.0	7	True	NA	NA
PB.1846.36	chr11	-	2216	16	novel_in_catalog	HPS5	novel	4725	22	NA	NA	-45	-3935	combination_of_known_junctions	FALSE	canonical	1	10828	junction_15	47650.835320834965	NA	1	NA	TRUE	NA	NA	NA	C	coding	685	2055	161	2215	75.0	208	False	AAAAAG	-14
PB.1846.37	chr11	-	2226	15	novel_in_catalog	HPS5	novel	4725	22	NA	NA	35	-3936	no_combination_of_known_junctions	FALSE	canonical	1	908	junction_8	56817.03948856275	NA	5	1	TRUE	NA	NA	NA	C	coding	661	1983	244	2226	70.0	-7	True	AAAAAG	-13
PB.1846.34	chr11	-	2233	16	novel_in_catalog	HPS5	novel	4725	22	NA	NA	3	-3926	no_combination_of_known_junctions	FALSE	canonical	1	10737	junction_15	47667.786217901456	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2064	169	2232	60.0	-1	True	AAAAAG	-23
PB.1846.35	chr11	-	2185	15	incomplete-splice_match	HPS5	ENST00000396253.7	4725	22	-8	13158	-4	-3935	3prime_fragment	FALSE	canonical	1	34157	junction_14	39823.1215447939	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1713	472	2184	75.0	12	True	AAAAAG	-14
PB.1846.32	chr11	-	4130	23	full-splice_match	HPS5	ENST00000349215.7	4491	23	36	325	36	234	multi-exon	FALSE	canonical	1	36087	junction_22	40806.80729340884	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	243	3632	60.0	-6	True	NA	NA
PB.1846.33	chr11	-	3372	20	incomplete-splice_match	HPS5	ENST00000396253.7	4725	22	35	4899	35	226	3prime_fragment	FALSE	canonical	1	34157	junction_19	38670.84169373533	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	429	3224	20.0	-7	True	AATAAA	-23
PB.1846.30	chr11	-	4179	22	full-splice_match	HPS5	ENST00000396253.7	4725	22	-2	548	2	-157	multi-exon	FALSE	canonical	1	34157	junction_21	37269.88608159605	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	466	3513	75.0	275	False	NA	NA
PB.1846.31	chr11	-	4066	22	novel_in_catalog	HPS5	novel	4725	22	NA	NA	4	-157	combination_of_known_junctions	FALSE	canonical	1	18824	junction_21	39809.22893294754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	353	3400	75.0	0	True	NA	NA
PB.7543.1	chr21	-	2339	2	novel_not_in_catalog	LINC01679	novel	2798	2	NA	NA	-136	-2	any annotated donor/acceptor	FALSE	canonical	1	3613	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-659	False	NA	NA
PB.7543.2	chr21	-	2942	2	full-splice_match	LINC01679	ENST00000442815.1	2798	2	-147	3	-147	-3	multi-exon	FALSE	canonical	1	3518	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-670	False	NA	NA
PB.8595.3	chr3	-	2984	15	novel_not_in_catalog	P3H2	novel	3509	15	NA	NA	-16	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	95563.4168180684	NA	7	1	TRUE	NA	NA	NA	C	coding	339	1020	886	1905	25.0	-17	False	AATAAA	-16
PB.8595.5	chr3	-	2376	15	full-splice_match	P3H2	ENST00000319332.9	3509	15	-3	1136	-3	-167	multi-exon	FALSE	canonical	1	164234	junction_14	36668.39630216256	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	202	2328	25.0	1504	False	TTTAAA	-12
PB.1846.38	chr11	-	2066	15	novel_in_catalog	HPS5	novel	4725	22	NA	NA	3	-3936	combination_of_known_junctions	FALSE	canonical	1	18824	junction_14	43095.62920691373	NA	7	1	TRUE	NA	NA	NA	C	coding	571	1713	354	2066	70.0	-1	True	AAAAAG	-13
PB.1846.39	chr11	-	2315	16	incomplete-splice_match	HPS5	ENST00000349215.7	4491	23	16	12770	16	-3938	3prime_fragment	FALSE	canonical	1	36087	junction_15	43150.4551569145	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2052	263	2314	65.0	-26	True	AAAAAG	-11
PB.67.7	chr1	-	2545	1	incomplete-splice_match	RERE	ENST00000337907.7	8026	24	462513	11	130	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	582	893	15.0	6912	False	AATAAA	-14
PB.8881.10	chr4	-	2764	5	full-splice_match	FAM13A	ENST00000509094.5	2762	5	-9	7	1	-7	multi-exon	FALSE	canonical	1	30896	junction_1	23785.034848618576	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	208	1041	45.0	-1	True	NA	NA
PB.8881.11	chr4	-	1882	5	novel_not_in_catalog	FAM13A	novel	5858	24	NA	NA	-3	3472	intron_retention	FALSE	canonical	1	2868	junction_1	33660.28227377186	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	212	832	85.0	-5	True	NA	NA
PB.8881.13	chr4	-	2964	5	full-splice_match	FAM13A	ENST00000515600.1	2206	5	146	-904	-27	904	multi-exon	TRUE	canonical	1	6120	junction_4	32435.88994848145	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	107	715	20.0	-29	False	NA	NA
PB.8881.15	chr4	-	4849	1	novel_in_catalog	FAM13A	novel	1993	13	NA	NA	-1	-31795	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-3	True	NA	NA
PB.886.5	chr1	+	3979	8	full-splice_match	UHMK1	ENST00000489294.1	8478	8	-23	4522	15	1034	multi-exon	FALSE	canonical	1	279935	junction_1	89999.36959371051	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	182	1441	40.0	-26	True	NA	NA
PB.6722.4	chr2	+	2560	4	novel_in_catalog	TSN	novel	555	6	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	8327	junction_1	372464.40900067514	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-41	True	AATAAA	-23
PB.8005.2	chr3	-	6280	30	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	50311	junction_28	104602.56964920892	NA	5	1	TRUE	NA	NA	NA	C	coding	1259	3780	119	3898	30.0	-1	True	ATTAAA	-20
PB.67.2	chr1	-	6731	17	full-splice_match	RERE	ENST00000377464.5	6733	17	2	0	2	0	multi-exon	FALSE	canonical	1	42430	junction_16	160223.21967949852	NA	1	NA	TRUE	NA	NA	NA	C	coding	1298	3897	154	4050	10.0	-22	True	AATAAA	-16
PB.2885.4	chr12	+	3721	28	novel_in_catalog	UBE3B	novel	5620	28	NA	NA	1	-50	combination_of_known_junctions	FALSE	canonical	1	5411	junction_1	49927.061713424286	NA	1	NA	TRUE	NA	NA	NA	C	coding	1068	3207	276	3482	20.0	-5	True	AATAAA	-16
PB.2885.5	chr12	+	3714	28	full-splice_match	UBE3B	ENST00000434735.6	5620	28	228	1678	2	-44	multi-exon	FALSE	canonical	1	51446	junction_1	43954.845351276075	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	263	3469	10.0	-4	True	AATAAA	-22
PB.2885.6	chr12	+	2873	24	incomplete-splice_match	UBE3B	ENST00000434735.6	5620	28	232	10301	-1	0	3prime_fragment	FALSE	canonical	1	51446	junction_1	46741.53571327689	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2613	259	2871	55.0	0	True	NA	NA
PB.2885.7	chr12	+	5387	28	full-splice_match	UBE3B	ENST00000434735.6	5620	28	232	1	-1	-1	multi-exon	FALSE	canonical	1	51446	junction_1	43954.845351276075	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	259	3465	10.0	0	True	ATTAAA	-19
PB.10092.38	chr6	-	2284	11	full-splice_match	SYNCRIP	ENST00000369622.7	3023	11	309	430	15	-430	multi-exon	FALSE	canonical	1	75283	junction_6	344548.31242860557	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	193	2064	50.0	-41	True	AATAAA	-18
PB.2885.1	chr12	+	5730	28	full-splice_match	UBE3B	ENST00000342494.7	5722	28	-7	-1	0	1	multi-exon	FALSE	canonical	1	92148	junction_1	39524.805896869184	NA	3	NA	TRUE	NA	NA	NA	C	coding	1068	3207	603	3809	10.0	1	True	ATTAAA	-18
PB.2885.2	chr12	+	4060	28	full-splice_match	UBE3B	ENST00000342494.7	5722	28	-18	1680	-4	-49	multi-exon	FALSE	canonical	1	92148	junction_1	39524.805896869184	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	614	3820	15.0	-10	True	AATAAA	-17
PB.2885.3	chr12	+	5284	27	novel_in_catalog	UBE3B	novel	5620	28	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	7636	junction_1	50461.76047718807	NA	1	NA	TRUE	NA	NA	NA	C	coding	1068	3207	159	3365	15.0	-6	True	ATTAAA	-16
PB.10092.34	chr6	-	2555	11	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-28635	-56227	no_combination_of_known_junctions	FALSE	canonical	1	28014	junction_10	367482.08023009775	NA	0	NA	TRUE	NA	NA	NA	B	coding	623	1872	133	2004	30.0	-3	True	AATAAA	-29
PB.10092.35	chr6	-	2391	10	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27706	-56229	any annotated donor/acceptor	FALSE	canonical	1	20484	junction_6	361631.2914459139	NA	4	NA	TRUE	NA	NA	NA	B	coding	471	1416	427	1842	35.0	-5	True	AATAAA	-27
PB.10092.36	chr6	-	2504	10	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-27747	-56229	no_combination_of_known_junctions	FALSE	canonical	1	3000	junction_6	373051.59538952075	NA	8	NA	TRUE	NA	NA	NA	B	coding	585	1758	198	1955	35.0	-46	True	AATAAA	-27
PB.10092.37	chr6	-	2503	11	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27739	-56231	any annotated donor/acceptor	FALSE	canonical	1	28745	junction_3	373214.7489152726	NA	0	NA	TRUE	NA	NA	NA	B	coding	588	1767	190	1956	40.0	-38	True	AATAAA	-25
PB.2885.8	chr12	+	6367	28	novel_not_in_catalog	UBE3B	novel	5620	28	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	12457	junction_15	54259.75552734749	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	2961	4448	15.0	1	True	ATTAAA	-16
PB.2885.9	chr12	+	6030	28	novel_not_in_catalog	UBE3B	novel	5620	28	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	61012.69653007525	NA	3	NA	TRUE	NA	NA	NA	C	coding	1044	3135	259	3393	15.0	1	True	ATTAAA	-16
PB.10092.32	chr6	-	2525	11	full-splice_match	SYNCRIP	ENST00000369622.7	3023	11	398	100	35	-100	multi-exon	FALSE	canonical	1	75283	junction_6	344548.31242860557	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	104	1975	35.0	-2	True	AATAAA	-28
PB.10092.33	chr6	-	2453	10	incomplete-splice_match	SYNCRIP	ENST00000616122.4	6764	11	-53	6421	16	-100	3prime_fragment	FALSE	canonical	1	75283	junction_6	353894.3074365914	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	326	1903	35.0	-40	True	AATAAA	-28
PB.1245.9	chr1	-	6828	34	novel_in_catalog	AHCTF1	novel	7041	26	NA	NA	22	-1753	combination_of_known_junctions	FALSE	canonical	1	25	junction_18	22451.454725743544	NA	0	NA	TRUE	NA	NA	NA	C	coding	2132	6399	376	6774	70.0	2	True	NA	NA
PB.1245.8	chr1	-	6987	35	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	-3	3603	-3	-1753	3prime_fragment	FALSE	canonical	1	25	junction_19	24193.171688648046	NA	1	NA	TRUE	NA	NA	NA	C	coding	2195	6585	401	6985	70.0	19	False	NA	NA
PB.11168.1	chr8	+	2635	17	full-splice_match	SGK3	ENST00000521198.6	3306	17	267	404	-49	0	multi-exon	FALSE	canonical	1	15821	junction_1	26104.548758011028	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	289	1761	85.0	-98	False	NA	NA
PB.11168.3	chr8	+	2653	17	full-splice_match	SGK3	ENST00000396596.2	4190	17	-27	1564	-27	1	multi-exon	FALSE	canonical	1	21019	junction_1	25189.178300164935	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	306	1778	85.0	-401	False	NA	NA
PB.11168.2	chr8	+	4152	17	full-splice_match	SGK3	ENST00000521198.6	3306	17	306	-1152	-10	-9	multi-exon	FALSE	canonical	1	15821	junction_1	26104.548758011028	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	250	1722	50.0	7	True	AATAAA	-7
PB.8080.31	chr3	-	2425	21	incomplete-splice_match	SMARCC1	ENST00000254480.9	6375	28	15	76022	15	9056	3prime_fragment	FALSE	canonical	1	438864	junction_20	136389.27267259694	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2319	106	2424	15.0	-10	True	NA	NA
PB.8080.30	chr3	-	2460	23	novel_not_in_catalog	SMARCC1	novel	6375	28	NA	NA	25	34229	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	210390.72634213386	NA	1	1	TRUE	NA	NA	NA	C	coding	800	2400	60	2459	50.0	36	True	NA	NA
PB.6213.1	chr19	+	2207	15	full-splice_match	EPS8L1	ENST00000245618.5	2198	15	-6	-3	-6	0	multi-exon	FALSE	canonical	1	17899	junction_1	54721.44473567181	NA	0	NA	TRUE	NA	NA	NA	A	coding	596	1791	109	1899	20.0	-6	True	TATAAA	-18
PB.9983.1	chr6	+	2010	2	incomplete-splice_match	FOXP4	ENST00000307972.8	3745	16	32029	1	27604	-1	5prime_fragment	FALSE	canonical	1	306501	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	90	273	49	321	10.0	-1461	False	ATTAAA	-18
PB.1245.6	chr1	-	7228	34	novel_in_catalog	AHCTF1	novel	7041	26	NA	NA	19	422	no_combination_of_known_junctions	FALSE	canonical	1	25	junction_18	22416.279776808187	NA	0	NA	TRUE	NA	NA	NA	C	coding	2143	6432	379	6810	5.0	-1	True	AATAAA	-17
PB.1245.5	chr1	-	7383	36	novel_not_in_catalog	AHCTF1	novel	7041	26	NA	NA	26	423	any annotated donor/acceptor	FALSE	canonical	1	25	junction_20	30430.404598033198	NA	3	NA	TRUE	NA	NA	NA	C	coding	2062	6189	928	7116	5.0	6	True	AATAAA	-18
PB.1245.4	chr1	-	7443	36	full-splice_match	AHCTF1	ENST00000648844.1	8892	36	22	1427	22	423	multi-exon	FALSE	canonical	1	25	junction_20	32946.36615131214	NA	0	NA	TRUE	NA	NA	NA	C	coding	2266	6801	376	7176	5.0	2	True	AATAAA	-18
PB.8334.18	chr3	-	3060	12	full-splice_match	GOLGB1	ENST00000494517.5	4959	12	-74	1973	0	-424	multi-exon	FALSE	canonical	1	48981	junction_6	56187.94446298251	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2949	112	3060	60.0	0	True	NA	NA
PB.8334.11	chr3	-	3617	13	novel_not_in_catalog	GOLGB1	novel	11187	22	NA	NA	-1	27	any annotated donor/acceptor	FALSE	canonical	1	29168	junction_7	63391.79436399872	NA	0	NA	TRUE	NA	NA	NA	C	coding	1168	3504	113	3616	60.0	-1	True	AAGAAA	-16
PB.8699.7	chr4	-	4125	3	full-splice_match	ZNF518B	ENST00000326756.3	6894	3	-64	2833	-14	-2833	multi-exon	FALSE	canonical	1	22481	junction_1	10960.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	504	3728	15.0	1	True	TATAAA	-18
PB.8334.13	chr3	-	3371	11	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	10282	junction_6	68920.96426088364	NA	2	NA	TRUE	NA	NA	NA	C	coding	1085	3255	116	3370	55.0	-4	True	NA	NA
PB.8334.12	chr3	-	3531	12	full-splice_match	GOLGB1	ENST00000494517.5	4959	12	-94	1522	-5	27	multi-exon	FALSE	canonical	1	48981	junction_6	56187.94446298251	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3399	132	3530	60.0	-1	True	AAGAAA	-16
PB.8334.15	chr3	-	3800	13	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	-14	-369	combination_of_known_junctions	FALSE	canonical	1	11821	junction_12	74484.90863530492	NA	6	NA	TRUE	NA	NA	NA	C	coding	1042	3126	674	3799	75.0	285	False	AAGAAA	-38
PB.8334.14	chr3	-	6876	11	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	-1	-369	intron_retention	FALSE	canonical	1	153688	junction_2	31953.94655688089	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2379	4497	6875	75.0	-1	True	AAGAAA	-38
PB.8334.17	chr3	-	3144	12	incomplete-splice_match	GOLGB1	ENST00000614479.4	11115	21	26	34193	-1	-369	3prime_fragment	FALSE	canonical	1	42100	junction_10	70773.95721988409	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2886	258	3143	75.0	-1	True	AAGAAA	-38
PB.8334.16	chr3	-	3195	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	0	34236	0	-412	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3084	112	3195	50.0	0	True	NA	NA
PB.587.1	chr1	-	4125	15	full-splice_match	WDR47	ENST00000369962.7	4199	15	70	4	-19	0	multi-exon	TRUE	canonical	1	81336	junction_14	37470.90507620001	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	154	2913	25.0	146	False	AATAAA	-16
PB.147.1	chr1	-	5136	19	full-splice_match	ECE1	ENST00000415912.6	5099	19	-37	0	31	0	multi-exon	TRUE	canonical	1	258619	junction_18	181641.51616856604	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	167	2428	5.0	-1	True	AATAAA	-18
PB.977.5	chr1	-	2299	4	novel_in_catalog	RGS16	novel	2427	5	NA	NA	19	-1561	intron_retention	FALSE	canonical	1	165031	junction_3	24645.629646382877	NA	6	NA	TRUE	NA	NA	NA	C	coding	152	459	131	589	95.0	-1	True	NA	NA
PB.977.4	chr1	-	2587	3	novel_in_catalog	RGS16	novel	2427	5	NA	NA	19	-1560	intron_retention	FALSE	canonical	1	165031	junction_2	4883.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.977.1	chr1	-	2407	5	full-splice_match	RGS16	ENST00000367558.5	2427	5	19	1	19	-1	multi-exon	FALSE	canonical	1	165031	junction_4	22539.91487339737	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	131	739	20.0	-1	True	AATAAA	-18
PB.8501.2	chr3	-	3173	1	incomplete-splice_match	KPNA4	ENST00000334256.8	8981	17	66482	939	22690	-939	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	8948	False	NA	NA
PB.8501.1	chr3	-	4818	1	incomplete-splice_match	KPNA4	ENST00000334256.8	8981	17	65767	9	21975	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	8233	False	AATAAA	-19
PB.977.2	chr1	-	4207	1	novel_in_catalog	RGS16	novel	2427	5	NA	NA	19	-1560	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.10840.1	chr7	-	3648	16	novel_not_in_catalog	TMEM209	novel	3545	15	NA	NA	-24	1	any annotated donor/acceptor	FALSE	canonical	1	206	junction_1	97896.56166237686	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	53	1885	35.0	-22	True	ATTAAA	-30
PB.11354.3	chr8	+	1863	3	full-splice_match	CHRAC1	ENST00000220913.9	2488	3	187	438	174	232	multi-exon	FALSE	canonical	1	366430	junction_1	40550.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	16	411	15.0	6	True	NA	NA
PB.10840.3	chr7	-	3428	15	novel_not_in_catalog	TMEM209	novel	3545	15	NA	NA	-12	1	any annotated donor/acceptor	FALSE	canonical	1	6802	junction_3	77630.49951483934	NA	2	1	TRUE	NA	NA	NA	C	coding	494	1485	41	1525	35.0	-10	True	ATTAAA	-30
PB.10840.2	chr7	-	3473	15	full-splice_match	TMEM209	ENST00000397622.6	3545	15	73	-1	-22	1	multi-exon	FALSE	canonical	1	121259	junction_14	51760.57419622051	NA	1	NA	TRUE	NA	NA	NA	C	coding	561	1686	51	1736	35.0	-20	True	ATTAAA	-30
PB.11477.11	chr9	-	2707	11	full-splice_match	MLLT3	ENST00000630269.2	2040	11	-103	-564	-103	-558	multi-exon	FALSE	canonical	1	10010	junction_10	85233.95516629508	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	202	1899	50.0	-39	True	AATAAA	-15
PB.10840.4	chr7	-	3337	14	full-splice_match	TMEM209	ENST00000473456.5	1961	14	-12	-1364	-12	1	multi-exon	FALSE	canonical	1	20540	junction_5	81064.43018551217	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	41	1600	35.0	-10	True	ATTAAA	-30
PB.11354.4	chr8	+	1737	3	full-splice_match	CHRAC1	ENST00000519618.1	811	3	4	-930	4	228	multi-exon	FALSE	canonical	1	4974	junction_1	221278.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-10	True	NA	NA
PB.6990.49	chr2	-	7721	46	full-splice_match	FN1	ENST00000336916.8	8435	46	302	412	301	0	multi-exon	FALSE	canonical	1	4033929	junction_15	2269059.901717288	NA	1	NA	TRUE	NA	NA	NA	C	coding	2320	6963	70	7032	35.0	663	False	AATAAA	-14
PB.10840.9	chr7	-	3676	15	novel_not_in_catalog	TMEM209	novel	3545	15	NA	NA	-38	-7	any annotated donor/acceptor	FALSE	canonical	1	732	junction_1	82035.55290673846	NA	3	NA	TRUE	NA	NA	NA	C	coding	544	1635	67	1701	55.0	-36	True	ATTAAA	-22
PB.4808.6	chr17	+	2962	5	novel_not_in_catalog	ALKBH5	novel	1605	4	NA	NA	-395	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	443900.7134007418	NA	4	NA	TRUE	NA	NA	NA	C	coding	394	1185	223	1407	25.0	4	True	AATAAA	-22
PB.4808.5	chr17	+	2998	3	novel_in_catalog	ALKBH5	novel	1605	4	NA	NA	-410	-4	no_combination_of_known_junctions	FALSE	canonical	1	11583	junction_2	502005.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	342	1029	416	1444	25.0	-11	True	AATAAA	-21
PB.4808.4	chr17	+	3074	3	novel_in_catalog	ALKBH5	novel	1605	4	NA	NA	-410	-3	no_combination_of_known_junctions	FALSE	canonical	1	6089	junction_1	522097.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	416	1519	25.0	-11	True	AATAAA	-22
PB.4808.3	chr17	+	2824	5	novel_not_in_catalog	ALKBH5	novel	1605	4	NA	NA	-411	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	443900.7134007418	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	91	1275	30.0	-12	True	AATAAA	-16
PB.4808.2	chr17	+	2719	4	full-splice_match	ALKBH5	ENST00000399138.4	2748	4	-408	437	-408	119	multi-exon	FALSE	canonical	1	1007544	junction_2	18544.120008479476	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	414	1598	80.0	-9	True	GGGGCT	-4
PB.4808.1	chr17	+	2733	4	full-splice_match	ALKBH5	ENST00000399138.4	2748	4	12	3	12	-3	multi-exon	FALSE	canonical	1	1007544	junction_2	18544.120008479476	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	42	1178	25.0	-656	False	AATAAA	-22
PB.7336.11	chr20	+	7962	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	122263	junction_19	102846.95524849709	NA	1	NA	TRUE	NA	NA	NA	C	coding	1423	4272	232	4503	25.0	0	True	AATAAA	-20
PB.918.1	chr1	+	1977	5	incomplete-splice_match	ATP1B1	ENST00000367816.5	2608	7	5673	5	3463	-5	5prime_fragment	FALSE	canonical	1	1715533	junction_1	141106.17442085056	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	72	815	15.0	51	False	AATAAA	-11
PB.8872.1	chr4	+	4351	14	incomplete-splice_match	PKD2	ENST00000237596.6	5056	15	11833	1	11269	-1	5prime_fragment	FALSE	canonical	1	101540	junction_3	71198.98820843823	NA	1	NA	TRUE	NA	NA	NA	A	coding	727	2184	86	2269	20.0	8159	False	AATAAA	-17
PB.1370.1	chr10	+	2968	1	genic	AL135791.1	novel	NA	NA	NA	NA	-43	1554	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-86	False	NA	NA
PB.7336.12	chr20	+	4485	24	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-13	115	any annotated donor/acceptor	FALSE	canonical	1	10379	junction_12	125675.2754286089	NA	1	NA	TRUE	NA	NA	NA	C	coding	1312	3939	230	4168	20.0	2	True	CATAAA	-17
PB.8005.6	chr3	-	6289	35	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	-44	-1	no_combination_of_known_junctions	FALSE	canonical	1	1363	junction_34	103112.9273393436	NA	0	NA	TRUE	NA	NA	NA	C	coding	1392	4179	474	4652	35.0	-18	True	AATAAA	-28
PB.6805.1	chr2	+	2063	7	novel_in_catalog	TANK	novel	2152	8	NA	NA	-5	-2	no_combination_of_known_junctions	FALSE	canonical	1	3091	junction_4	230220.7506998567	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	593	1411	20.0	-24	True	ATTAAA	-11
PB.1051.21	chr1	+	5951	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-19	0	intron_retention	FALSE	canonical	1	19621	junction_1	193239.87286940377	NA	2	NA	TRUE	NA	NA	NA	C	coding	810	2433	1794	4226	25.0	12	True	AATAAA	-18
PB.1051.20	chr1	+	2971	13	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-19	-7316	intron_retention	FALSE	canonical	1	7347	junction_1	82820.56194317527	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1038	1933	2970	45.0	12	True	NA	NA
PB.2863.10	chr12	-	2606	4	novel_not_in_catalog	CKAP4	novel	3093	2	NA	NA	-34	-148	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	445910.02149761113	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	691	1215	85.0	-31	True	NA	NA
PB.1051.22	chr1	+	4853	19	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-18	-21	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_2	193846.9025304617	NA	2	1	TRUE	NA	NA	NA	C	coding	810	2433	807	3239	35.0	13	True	TTTAAA	-21
PB.1051.25	chr1	+	11182	18	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	19678	junction_5	192007.40155355856	NA	38	1	TRUE	NA	NA	NA	C	coding	810	2433	7029	9461	20.0	13	True	AATAAA	-14
PB.1051.24	chr1	+	4619	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	2294	junction_2	197870.74857934864	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	462	2894	25.0	13	True	AATAAA	-18
PB.9434.8	chr5	-	4853	17	full-splice_match	FNIP1	ENST00000307968.11	6388	17	-96	1631	0	1092	multi-exon	FALSE	canonical	1	90497	junction_11	28007.79051888956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1138	3417	97	3513	60.0	-1	True	NA	NA
PB.1051.26	chr1	+	2410	8	incomplete-splice_match	ZC3H11A	ENST00000367210.2	5877	18	-23	23953	-17	272	3prime_fragment	FALSE	canonical	1	19678	junction_5	40945.909988367704	NA	3	NA	TRUE	NA	NA	NA	C	coding	221	663	1746	2408	70.0	14	True	AATAAA	-22
PB.1051.29	chr1	+	11677	17	full-splice_match	ZBED6	ENST00000550078.2	12481	17	-71	875	-71	6	multi-exon	FALSE	canonical	1	19678	junction_4	197080.6370162886	NA	3	NA	TRUE	NA	NA	NA	A	coding	810	2433	7520	9952	25.0	20	False	AATAAA	-18
PB.4644.15	chr17	-	2573	15	incomplete-splice_match	ABR	ENST00000291107.6	2673	22	-10	43291	-10	781	3prime_fragment	FALSE	canonical	1	176527	junction_14	115704.68924847746	NA	4	NA	TRUE	NA	NA	NA	C	coding	649	1950	43	1992	85.0	-9	True	NA	NA
PB.11378.4	chr8	-	2117	9	novel_in_catalog	EEF1D	novel	1458	8	NA	NA	-14	0	intron_retention	FALSE	canonical	1	53090	junction_8	1354273.7913617152	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	110	2053	0.0	215	False	ATTAAA	-14
PB.1349.11	chr10	-	6694	36	full-splice_match	SVIL	ENST00000375400.7	6729	36	2	33	2	-23	multi-exon	FALSE	canonical	1	9538	junction_35	124241.27818952991	NA	2	1	TRUE	NA	NA	NA	C	coding	1788	5367	452	5818	60.0	-7	True	AATAAA	-9
PB.9842.2	chr6	+	3603	8	incomplete-splice_match	TRIM39	ENST00000396548.5	3198	9	250	1	-89	0	5prime_fragment	FALSE	canonical	1	14558	junction_1	35970.244383095196	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	668	2134	15.0	-213	False	NA	NA
PB.9842.3	chr6	+	3615	8	novel_in_catalog	TRIM39	novel	1003	3	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	19376	junction_1	34565.28186678958	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	682	2148	5.0	-14	True	NA	NA
PB.9842.1	chr6	+	3311	8	novel_in_catalog	TRIM39	novel	1003	3	NA	NA	-56	-250	combination_of_known_junctions	FALSE	canonical	1	6178	junction_1	38467.73398205677	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	626	2092	50.0	-46	True	NA	NA
PB.9842.6	chr6	+	4129	5	incomplete-splice_match	TRIM39	ENST00000376656.8	3338	9	62	4654	1	-2396	3prime_fragment	FALSE	canonical	1	25425	junction_1	42232.51026978505	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	251	1066	10.0	-477	False	ATTAAA	-23
PB.9842.7	chr6	+	3210	9	novel_in_catalog	TRIM39	novel	1003	3	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	5219	junction_1	43506.133973951015	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	277	1743	5.0	-473	False	NA	NA
PB.10449.16	chr7	-	1622	12	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	183033	junction_1	5342812.413863581	NA	9	1	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	30.0	-1	True	AATAAA	-15
PB.9842.5	chr6	+	3187	8	full-splice_match	TRIM39	ENST00000396551.7	3249	8	61	1	0	0	multi-exon	FALSE	canonical	1	25425	junction_1	32838.81923167476	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	252	1718	15.0	-478	False	NA	NA
PB.5447.5	chr18	+	3033	2	full-splice_match	ZNF271P	ENST00000638208.1	2191	2	-29	-813	-17	813	multi-exon	FALSE	canonical	1	49774	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	735	2006	15.0	-9	True	ATTAAA	-15
PB.8841.2	chr4	-	4219	12	full-splice_match	CNOT6L	ENST00000504123.6	8865	12	-20	4666	-20	-32	multi-exon	FALSE	canonical	1	10491	junction_3	53076.19672315492	NA	3	NA	TRUE	NA	NA	NA	C	coding	550	1653	189	1841	75.0	2482	False	AATAAA	-30
PB.5949.3	chr19	-	5176	2	novel_in_catalog	ZNF260	novel	5666	3	NA	NA	-115	6	no_combination_of_known_junctions	FALSE	canonical	1	9896	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	636	1865	20.0	299	False	NA	NA
PB.8515.3	chr3	+	3083	8	novel_in_catalog	SKIL	novel	554	2	NA	NA	-10	213	combination_of_known_junctions	FALSE	canonical	1	2100	junction_2	121666.64740182496	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	286	2340	15.0	-47	True	AATAAA	-16
PB.8515.4	chr3	+	7197	7	full-splice_match	SKIL	ENST00000259119.8	3057	7	-56	-4084	-8	-3	multi-exon	FALSE	canonical	1	89816	junction_1	93616.32040348994	NA	3	NA	TRUE	NA	NA	NA	C	coding	684	2055	728	2782	35.0	-45	True	AATAAA	-18
PB.8515.5	chr3	+	1920	1	genic	SKIL	novel	NA	NA	NA	NA	-8	-484	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-45	True	NA	NA
PB.8515.6	chr3	+	1772	2	full-splice_match	SKIL	ENST00000465590.1	594	2	-15	-1163	-8	676	multi-exon	FALSE	canonical	1	89816	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	348	1044	728	1771	50.0	-45	True	AAGAAA	-22
PB.8515.7	chr3	+	2341	5	incomplete-splice_match	SKIL	ENST00000259119.8	3057	7	-54	2339	-6	-778	3prime_fragment	FALSE	canonical	1	89816	junction_1	59119.251650266175	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1614	726	2339	70.0	-43	True	NA	NA
PB.8515.8	chr3	+	4500	6	incomplete-splice_match	SKIL	ENST00000259119.8	3057	7	-33	-412	8	213	intron_retention	FALSE	canonical	1	89816	junction_1	77922.26650091745	NA	4	NA	TRUE	NA	NA	NA	C	coding	657	1974	705	2678	15.0	-22	True	AATAAA	-16
PB.3090.24	chr13	-	1900	4	novel_in_catalog	HMGB1	novel	5485	5	NA	NA	2	232	intron_retention	FALSE	canonical	1	6253	junction_3	170319.33602174735	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	156	680	25.0	-4	True	AAGAAA	-14
PB.3090.25	chr13	-	869	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	55	4561	4	231	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	130	777	25.0	3	True	AAGAAA	-13
PB.7265.53	chr20	-	2319	3	incomplete-splice_match	RBM39	ENST00000463004.5	4580	16	-22	28446	0	5	3prime_fragment	FALSE	canonical	1	963480	junction_1	142066.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.7265.52	chr20	-	2888	3	incomplete-splice_match	RBM39	ENST00000463004.5	4580	16	-2	27857	0	-106	3prime_fragment	FALSE	canonical	1	963480	junction_1	142066.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	21	True	AATAAA	-37
PB.7265.51	chr20	-	2148	6	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	1	50146	junction_2	449502.6851118912	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	26	True	AATAAA	-15
PB.7265.50	chr20	-	2761	4	novel_in_catalog	RBM39	novel	5914	18	NA	NA	1	-4	intron_retention	FALSE	canonical	1	789617	junction_2	188773.89193129673	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	24	True	AATAAA	-15
PB.9865.7	chr6	-	1831	7	novel_in_catalog	HLA-C	novel	754	2	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	4557151	junction_6	4162384.9155422105	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	676	1413	15.0	949	False	AATAAA	-19
PB.9865.6	chr6	-	1908	6	full-splice_match	HLA-C	ENST00000487245.5	1880	6	-119	91	-39	-91	multi-exon	FALSE	canonical	1	4975431	junction_4	3995188.038491305	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	842	1579	35.0	913	False	TATAAA	-12
PB.7265.55	chr20	-	1991	3	full-splice_match	RBM39	ENST00000461849.1	861	3	-4	-1126	-4	130	multi-exon	FALSE	canonical	1	789617	junction_1	228998.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	17	True	NA	NA
PB.7265.54	chr20	-	2101	4	novel_in_catalog	RBM39	novel	5914	18	NA	NA	6	3	intron_retention	FALSE	canonical	1	789617	junction_2	188773.89193129673	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-9	True	NA	NA
PB.145.18	chr1	-	3469	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-3	-76	combination_of_known_junctions	FALSE	canonical	1	222513	junction_12	333508.870958761	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	222	1883	5.0	-9	True	AATAAA	-16
PB.4976.1	chr17	-	2131	8	full-splice_match	P3H4	ENST00000393928.5	2601	8	470	0	-60	0	multi-exon	FALSE	canonical	1	181630	junction_7	68327.62219734312	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	376	1128	20.0	7843	False	NA	NA
PB.5447.4	chr18	+	2527	2	full-splice_match	ZNF271P	ENST00000638208.1	2191	2	-30	-306	-18	306	multi-exon	FALSE	canonical	1	49774	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	736	2007	95.0	-10	True	NA	NA
PB.7515.2	chr21	-	2513	1	novel_in_catalog	CLDN14	novel	1453	3	NA	NA	-29	-14092	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	17	False	NA	NA
PB.11562.7	chr9	+	3479	3	incomplete-splice_match	FRG1HP	ENST00000610803.4	576	4	36	9801	-20	-9801	3prime_fragment	FALSE	canonical	1	320	junction_1	17885.5	NA	6	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.11562.6	chr9	+	5243	4	novel_not_in_catalog	FRG1HP	novel	593	4	NA	NA	4	5135	intron_retention	FALSE	canonical	1	590	junction_2	20919.051747151447	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-11
PB.11562.5	chr9	+	3390	5	novel_not_in_catalog	FRG1HP	novel	593	4	NA	NA	0	5135	any annotated donor/acceptor	FALSE	canonical	1	590	junction_3	19972.38778132199	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-11
PB.11562.4	chr9	+	3524	8	novel_not_in_catalog	FRG1HP	novel	593	4	NA	NA	0	3383	any annotated donor/acceptor	FALSE	canonical	1	320	junction_1	20196.59071451902	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.6325.14	chr2	+	2594	23	novel_in_catalog	DDX1	novel	2817	27	NA	NA	51	0	intron_retention	FALSE	canonical	1	9030	junction_13	374562.6187646529	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	33	992	20.0	34	True	AATAAA	-13
PB.7098.2	chr2	-	1475	10	full-splice_match	NDUFA10	ENST00000252711.6	4915	10	71	3369	-7	0	multi-exon	FALSE	canonical	1	505596	junction_9	324515.5486264425	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	31	1098	20.0	0	True	AATAAA	-15
PB.5024.8	chr17	-	4649	11	novel_in_catalog	ETV4	novel	2147	12	NA	NA	24	-1	intron_retention	FALSE	canonical	1	107418	junction_10	59890.97445224948	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	31	891	10.0	22	True	AATAAA	-17
PB.2951.10	chr12	+	1771	5	novel_not_in_catalog	AL021546.1	novel	552	5	NA	NA	8262	1893	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	115646.84764267248	NA	0	NA	TRUE	NA	NA	NA	B	coding	136	411	22	432	90.0	16	True	NA	NA
PB.5024.7	chr17	-	2294	14	novel_not_in_catalog	ETV4	novel	2147	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	2535	junction_10	115943.13604797421	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	293	1621	5.0	-1	True	AATAAA	-18
PB.5024.5	chr17	-	2228	12	full-splice_match	ETV4	ENST00000545954.5	1775	12	-19	-434	-19	0	multi-exon	FALSE	canonical	1	9284	junction_11	81292.13878698225	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	216	1553	5.0	-3	True	AATAAA	-20
PB.5024.2	chr17	-	2221	13	full-splice_match	ETV4	ENST00000591713.5	1727	13	0	-494	0	1	multi-exon	FALSE	canonical	1	8991	junction_12	86022.7775922604	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	91	1545	0.0	-1	True	AATAAA	-21
PB.5024.3	chr17	-	2338	13	full-splice_match	ETV4	ENST00000319349.9	2429	13	91	0	-18	0	multi-exon	FALSE	canonical	1	37983	junction_12	80024.14056200479	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	209	1663	5.0	-2	True	AATAAA	-20
PB.5024.1	chr17	-	2326	13	novel_not_in_catalog	ETV4	novel	2147	12	NA	NA	-19	2	any annotated donor/acceptor	TRUE	canonical	1	17773	junction_4	96787.26055317862	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	210	1649	0.0	-3	True	AATAAA	-22
PB.3226.8	chr13	+	3643	5	novel_not_in_catalog	DNAJC3	novel	5591	12	NA	NA	6	-46071	any annotated donor/acceptor	FALSE	canonical	1	6105	junction_4	138524.47833573495	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	112	816	30.0	-10	True	AATAAA	-22
PB.3226.9	chr13	+	2405	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	9	3177	9	-31	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	109	1623	45.0	-7	True	GATAAA	-15
PB.202.1	chr1	+	2973	8	full-splice_match	ZDHHC18	ENST00000374142.8	5020	8	166	1881	166	1757	multi-exon	FALSE	canonical	1	227413	junction_1	73110.69779199657	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	185	1096	0.0	-5177	False	AATAAA	-20
PB.1975.10	chr11	-	3375	12	novel_in_catalog	CPSF7	novel	3695	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11639	junction_9	252598.07008479297	NA	3	1	TRUE	NA	NA	NA	C	coding	305	918	479	1396	25.0	21	False	AATAAA	-16
PB.9431.17	chr5	+	3772	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-5	4	intron_retention	FALSE	canonical	1	2312	junction_1	302855.77221807337	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-45	True	AATAAA	-18
PB.6805.4	chr2	+	1925	8	full-splice_match	TANK	ENST00000259075.6	2152	8	48	179	-10	-158	multi-exon	FALSE	canonical	1	152487	junction_1	145698.9565673561	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	158	1435	50.0	-7	True	AATAAA	-23
PB.3226.1	chr13	+	5596	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	-7	2	-7	-2	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	2	NA	TRUE	NA	NA	NA	C	coding	504	1515	125	1639	15.0	-23	True	AATAAA	-22
PB.3226.2	chr13	+	2576	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	-9	3024	-9	122	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	127	1641	40.0	-25	True	AATAAA	-27
PB.3226.3	chr13	+	4124	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	0	1467	0	-1467	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	2	NA	TRUE	NA	NA	NA	C	coding	504	1515	118	1632	10.0	-16	True	NA	NA
PB.3226.4	chr13	+	3521	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	0	2070	0	1076	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	118	1632	75.0	-16	True	NA	NA
PB.3226.5	chr13	+	3293	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	0	2298	0	848	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	3	NA	TRUE	NA	NA	NA	C	coding	504	1515	118	1632	45.0	-16	True	AATAAA	-19
PB.3226.6	chr13	+	1400	11	incomplete-splice_match	DNAJC3	ENST00000602402.5	5591	12	2	7906	2	-4760	3prime_fragment	FALSE	canonical	1	290585	junction_1	88609.68787672147	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1284	116	1399	70.0	-14	True	NA	NA
PB.12220.12	chrX	+	5011	7	full-splice_match	TMEM164	ENST00000372073.5	5567	7	-21	577	-21	-573	multi-exon	FALSE	canonical	1	19211	junction_1	71741.99326986485	NA	4	NA	TRUE	NA	NA	NA	C	coding	297	894	358	1251	20.0	-40	True	AATAAA	-38
PB.10894.2	chr7	+	2259	10	full-splice_match	ZYX	ENST00000322764.9	2493	10	232	2	17	0	multi-exon	FALSE	canonical	1	331102	junction_1	878995.3274835713	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	114	1832	25.0	-35	True	AATAAA	-20
PB.10894.3	chr7	+	2166	9	novel_in_catalog	ZYX	novel	2493	10	NA	NA	17	0	intron_retention	FALSE	canonical	1	29317	junction_3	1107421.2891953934	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	114	1739	25.0	-35	True	AATAAA	-20
PB.9431.15	chr5	+	3569	6	full-splice_match	CDC42SE2	ENST00000360515.7	3591	6	4	18	4	5	multi-exon	FALSE	canonical	1	185505	junction_5	220300.35219182016	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-23	True	AATAAA	-19
PB.5391.1	chr18	-	3082	1	antisense	novelGene_VAPA_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.12220.11	chrX	+	5103	7	novel_not_in_catalog	TMEM164	novel	236	2	NA	NA	-30	-114	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78426.83805818997	NA	4	1	TRUE	NA	NA	NA	C	coding	170	513	372	884	20.0	-49	True	AATAAA	-29
PB.10894.4	chr7	+	2396	9	novel_in_catalog	ZYX	novel	2493	10	NA	NA	23	-2	intron_retention	FALSE	canonical	1	331102	junction_1	919191.166323245	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	724	1971	30.0	-29	True	AATAAA	-18
PB.9843.10	chr6	-	2246	4	incomplete-splice_match	HCG18	ENST00000412685.6	2552	5	465	1712	3	-753	3prime_fragment	FALSE	canonical	1	28091	junction_3	72246.00353575891	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	1266	1661	15.0	-16	True	NA	NA
PB.9431.12	chr5	+	3553	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-9	5	intron_retention	FALSE	canonical	1	6088	junction_5	274132.2650936223	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-49	True	AATAAA	-19
PB.12220.10	chrX	+	5039	7	full-splice_match	TMEM164	ENST00000372068.6	5566	7	-64	591	-45	-591	multi-exon	FALSE	canonical	1	76712	junction_1	52487.01147506241	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	404	1297	35.0	-83	False	AATAAA	-20
PB.6237.1	chr19	+	3096	1	full-splice_match	AC005261.1	ENST00000593427.1	4258	1	1152	10	1152	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	5182	False	AATAAA	-15
PB.9431.13	chr5	+	3426	5	full-splice_match	CDC42SE2	ENST00000395246.5	3485	5	44	15	-9	5	multi-exon	FALSE	canonical	1	20640	junction_1	317381.15264378884	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-49	True	AATAAA	-19
PB.11421.1	chr9	-	1683	15	full-splice_match	CBWD1	ENST00000356521.8	1706	15	-29	52	1	-1	multi-exon	FALSE	canonical	1	2111	junction_14	166209.59738639323	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	119	1306	30.0	NA	False	ATTAAA	-14
PB.3406.2	chr14	+	2597	13	incomplete-splice_match	FANCM	ENST00000542564.6	6167	22	-23	24700	-9	7905	3prime_fragment	FALSE	canonical	1	5318	junction_2	11976.806734499623	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2496	102	2597	75.0	-9	True	AAAAAG	-6
PB.6805.5	chr2	+	3166	7	novel_in_catalog	TANK	novel	2152	8	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	152487	junction_1	157294.31194287774	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1695	2513	20.0	-6	True	ATTAAA	-12
PB.8446.4	chr3	+	3965	13	novel_not_in_catalog	TRPC1	novel	3061	13	NA	NA	-19	-3	any annotated donor/acceptor	FALSE	canonical	1	2323	junction_8	33253.81528267346	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	193	1377	25.0	-11	True	AATAAA	-18
PB.3406.3	chr14	+	1652	1	novel_in_catalog	FANCM	novel	2354	11	NA	NA	0	-368	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	184	555	93	647	10.0	0	True	AATAAA	-13
PB.7106.3	chr2	-	2617	5	full-splice_match	MTERF4	ENST00000455202.6	2626	5	9	0	-1	0	multi-exon	FALSE	canonical	1	35566	junction_3	57795.554173742465	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-36	True	ATTAAA	-12
PB.10139.1	chr6	+	912	4	full-splice_match	C6orf203	ENST00000311381.7	900	4	-18	6	-18	0	multi-exon	FALSE	canonical	1	116977	junction_1	9410.017747060841	NA	0	NA	TRUE	NA	NA	NA	A	coding	240	723	90	812	20.0	-6	True	AATAAA	-16
PB.4798.1	chr17	-	2598	2	full-splice_match	PLD6	ENST00000321560.3	2560	2	-34	-4	-34	4	multi-exon	FALSE	canonical	1	58398	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	252	759	64	822	5.0	-17	True	AATAAA	-23
PB.9871.1	chr6	+	1317	4	full-splice_match	LTA	ENST00000454783.5	1507	4	187	3	-29	-3	multi-exon	FALSE	canonical	1	18663	junction_1	158848.8904609241	NA	2	1	TRUE	NA	NA	NA	C	coding	205	618	72	689	15.0	-3	True	AATAAA	-14
PB.9871.2	chr6	+	1415	4	full-splice_match	LTA	ENST00000418386.2	1422	4	4	3	4	-3	multi-exon	FALSE	canonical	1	268292	junction_1	53699.4428048891	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	170	787	15.0	-2	True	AATAAA	-14
PB.9871.3	chr6	+	1474	3	incomplete-splice_match	LTA	ENST00000418386.2	1422	4	232	3	221	-3	5prime_fragment	FALSE	canonical	1	296257	junction_1	48663.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	229	846	15.0	-2	True	AATAAA	-14
PB.11932.21	chr9	+	4252	24	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	135	-7	combination_of_known_junctions	FALSE	canonical	1	16216	junction_1	93472.1067872935	NA	4	NA	TRUE	NA	NA	NA	C	coding	1006	3021	92	3112	75.0	-4273	False	NA	NA
PB.6661.1	chr2	+	2331	8	novel_not_in_catalog	CNOT11	novel	2599	7	NA	NA	71	-1	any annotated donor/acceptor	FALSE	canonical	1	65	junction_1	208775.43825158855	NA	4	1	TRUE	NA	NA	NA	C	coding	450	1353	77	1429	20.0	-13	True	ATTAAA	-20
PB.6661.2	chr2	+	2482	7	full-splice_match	CNOT11	ENST00000289382.7	2599	7	115	2	115	-2	multi-exon	FALSE	canonical	1	282641	junction_1	120826.26223218195	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	49	1581	20.0	31	True	ATTAAA	-19
PB.8446.2	chr3	+	3415	1	genic	TRPC1	novel	NA	NA	NA	NA	-36	-50206	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-30	True	NA	NA
PB.9863.3	chr6	+	2594	3	incomplete-splice_match	TCF19	ENST00000376255.4	3039	4	869	-4	869	4	5prime_fragment	FALSE	canonical	1	274497	junction_1	18722.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	55	1092	10.0	827	False	NA	NA
PB.10290.12	chr6	-	1841	1	genic	MTRF1L	novel	NA	NA	NA	NA	-47	-2599	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	100	303	48	350	100.0	-44	True	NA	NA
PB.10460.1	chr7	-	2983	5	full-splice_match	JAZF1	ENST00000283928.9	3125	5	133	9	1	-9	multi-exon	FALSE	canonical	1	142519	junction_4	33041.99593320597	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	34	765	45.0	25	True	AATAAA	-14
PB.7910.1	chr3	+	1736	6	full-splice_match	LMCD1	ENST00000157600.7	8405	6	117	6552	-1	-4	multi-exon	FALSE	canonical	1	208936	junction_1	41704.73578192289	NA	0	NA	TRUE	NA	NA	NA	A	coding	365	1098	116	1213	35.0	1	True	AATAAA	-18
PB.11261.3	chr8	+	5440	15	novel_in_catalog	POP1	novel	585	5	NA	NA	0	-3	intron_retention	FALSE	canonical	1	102688	junction_12	16095.699283615219	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	97	1869	40.0	-15	True	AATAAA	-17
PB.11261.2	chr8	+	3259	16	full-splice_match	POP1	ENST00000401707.6	4719	16	6	1454	6	-32	multi-exon	FALSE	canonical	1	102688	junction_13	15624.48421278461	NA	1	NA	TRUE	NA	NA	NA	C	coding	1024	3075	76	3150	70.0	6	True	TTTAAA	-22
PB.11148.4	chr8	-	1820	8	full-splice_match	CA8	ENST00000524872.5	1825	8	-15	20	12	-20	multi-exon	FALSE	canonical	1	51015	junction_7	21721.936956516034	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	254	1126	70.0	-1	True	AATAAA	-23
PB.11261.7	chr8	+	3364	17	novel_not_in_catalog	POP1	novel	585	5	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	43805.73145715174	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	84	3227	40.0	-2	True	AATAAA	-16
PB.10290.10	chr6	-	2349	6	full-splice_match	MTRF1L	ENST00000367230.5	3431	6	-105	1187	-105	-1187	multi-exon	FALSE	canonical	1	582	junction_3	16092.129733506377	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	106	813	65.0	-5	True	NA	NA
PB.11261.5	chr8	+	4015	16	full-splice_match	POP1	ENST00000401707.6	4719	16	-14	718	1	704	multi-exon	FALSE	canonical	1	102688	junction_13	15624.48421278461	NA	2	NA	TRUE	NA	NA	NA	C	coding	1024	3075	96	3170	40.0	-14	True	NA	NA
PB.11261.4	chr8	+	4671	16	full-splice_match	POP1	ENST00000401707.6	4719	16	-14	62	1	-62	multi-exon	FALSE	canonical	1	102688	junction_13	15624.48421278461	NA	3	NA	TRUE	NA	NA	NA	C	coding	1024	3075	96	3170	75.0	-14	True	NA	NA
PB.4592.17	chr16	+	2125	6	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	1077	junction_4	182386.16510360647	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	64	693	20.0	0	True	AATAAA	-14
PB.4592.16	chr16	+	2283	8	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	415	junction_6	157389.58878800448	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	64	957	10.0	0	True	AATAAA	-18
PB.4592.15	chr16	+	2457	1	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-1538	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.4592.14	chr16	+	2511	7	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-6	no_combination_of_known_junctions	FALSE	canonical	1	253	junction_4	167217.63934407625	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	522	1190	25.0	0	True	AATAAA	-13
PB.4592.13	chr16	+	2560	8	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-5	no_combination_of_known_junctions	FALSE	canonical	1	4105	junction_4	159615.4634002915	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	570	1238	20.0	0	True	AATAAA	-14
PB.4592.12	chr16	+	5372	7	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	202316	junction_4	108406.8660079548	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	3384	4052	25.0	0	True	AATAAA	-12
PB.4592.11	chr16	+	2722	9	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-6	any annotated donor/acceptor	FALSE	canonical	1	792	junction_4	150197.04011517463	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	592	1401	25.0	0	True	AATAAA	-13
PB.4592.10	chr16	+	2716	10	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	177377.42396335714	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	117	1397	20.0	0	True	AATAAA	-11
PB.10622.2	chr7	-	1611	9	novel_in_catalog	TMEM120A	novel	1456	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	322775	junction_8	105451.96425261302	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	76	708	10.0	-51	True	AATAAA	-12
PB.10622.1	chr7	-	1305	12	full-splice_match	TMEM120A	ENST00000493111.6	1456	12	3	148	0	0	multi-exon	TRUE	canonical	1	322775	junction_11	102514.41295957501	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	87	1118	5.0	-62	True	AATAAA	-17
PB.4592.19	chr16	+	1718	9	full-splice_match	IRF8	ENST00000268638.9	3030	9	359	953	-1	285	multi-exon	FALSE	canonical	1	202316	junction_6	97039.7907844219	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	64	1344	55.0	0	True	GATAAA	-15
PB.4592.18	chr16	+	5061	8	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	202316	junction_5	102717.61322605361	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	2793	3740	25.0	0	True	AATAAA	-13
PB.7729.1	chr22	+	1987	1	antisense	novelGene_LARGE1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1396.2	chr10	+	3540	8	novel_not_in_catalog	TIMM23	novel	1222	7	NA	NA	61	3064	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	coding	209	630	116	745	25.0	-1	True	NA	NA
PB.1396.1	chr10	+	1190	7	full-splice_match	TIMM23	ENST00000580018.3	1222	7	38	-6	38	6	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	139	768	30.0	-24	True	AATAAA	-39
PB.10067.12	chr6	+	4567	23	full-splice_match	SENP6	ENST00000370010.6	4644	23	356	-279	-62	279	multi-exon	FALSE	canonical	1	103972	junction_5	128961.80948355497	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	661	3978	50.0	-15	True	AATAAA	-19
PB.11295.2	chr8	+	4601	16	novel_not_in_catalog	AC027031.2	novel	1318	2	NA	NA	-46	479786	any annotated donor/acceptor	FALSE	canonical	1	16876	junction_1	102749.76319445002	NA	2	NA	TRUE	NA	NA	NA	B	coding	846	2541	317	2857	45.0	-55	True	ACTAAA	-42
PB.10067.11	chr6	+	2787	16	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-63	6	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	154172.74581585423	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	662	2737	15.0	-16	True	ATTAAA	-23
PB.10067.16	chr6	+	3728	17	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-61	-54	combination_of_known_junctions	FALSE	canonical	1	48214	junction_2	176505.11950966492	NA	2	NA	TRUE	NA	NA	NA	C	coding	583	1752	1095	2846	15.0	-14	True	AATAAA	-41
PB.10947.11	chr7	+	3277	14	incomplete-splice_match	RBM33	ENST00000401878.7	10149	18	16	35761	-7	-2	3prime_fragment	FALSE	canonical	1	88603	junction_7	97308.12361503683	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	183	3170	30.0	34	True	ATTAAA	-24
PB.10067.14	chr6	+	4084	24	full-splice_match	SENP6	ENST00000447266.6	6501	24	-181	2598	-61	-197	multi-exon	FALSE	canonical	1	56267	junction_5	151504.13752258135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1112	3339	660	3998	30.0	-14	True	AATAAA	-17
PB.10067.15	chr6	+	3832	23	full-splice_match	SENP6	ENST00000370010.6	4644	23	357	455	-61	-428	multi-exon	FALSE	canonical	1	103972	junction_5	128961.80948355497	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3171	660	3830	65.0	-14	True	NA	NA
PB.10125.7	chr6	-	2915	17	novel_in_catalog	USP45	novel	5826	18	NA	NA	0	353	combination_of_known_junctions	FALSE	canonical	1	5971	junction_7	33474.563544986566	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	1137	2390	30.0	-1	True	NA	NA
PB.10125.6	chr6	-	3042	18	full-splice_match	USP45	ENST00000500704.6	5826	18	-21	2805	-21	360	multi-exon	FALSE	canonical	1	20297	junction_17	30349.272277577707	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	66	2510	45.0	-29	True	NA	NA
PB.5142.11	chr17	-	5256	20	novel_not_in_catalog	MTMR4	novel	5622	18	NA	NA	11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	108210.21896349451	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	115	3702	0.0	-15	True	AATAAA	-15
PB.10067.19	chr6	+	3164	19	novel_in_catalog	SENP6	novel	4644	23	NA	NA	39	4975	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	142183.67190033366	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2604	560	3163	65.0	-545	False	AATAAA	-15
PB.5142.17	chr17	-	4631	19	full-splice_match	MTMR4	ENST00000323456.9	5839	19	27	1181	-23	763	multi-exon	FALSE	canonical	1	49751	junction_17	95028.09390393681	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	99	3686	10.0	1	True	AATAAA	-30
PB.5142.16	chr17	-	4814	18	novel_in_catalog	MTMR4	novel	5622	18	NA	NA	-22	763	combination_of_known_junctions	FALSE	canonical	1	49581	junction_17	84676.10596582918	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	240	3869	10.0	-23	True	AATAAA	-30
PB.5142.15	chr17	-	4837	19	full-splice_match	MTMR4	ENST00000323456.9	5839	19	42	960	-8	-960	multi-exon	FALSE	canonical	1	49751	junction_17	95028.09390393681	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	84	3671	50.0	16	True	AATAAA	-12
PB.5142.14	chr17	-	5098	19	full-splice_match	MTMR4	ENST00000323456.9	5839	19	50	691	0	-691	multi-exon	FALSE	canonical	1	49751	junction_17	95028.09390393681	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	76	3663	30.0	24	True	TATAAA	-33
PB.52.7	chr1	-	3030	5	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	292270.4488144285	NA	0	NA	TRUE	NA	NA	NA	C	coding	94	285	56	340	25.0	-3	True	AATAAA	-20
PB.1137.10	chr1	-	2141	3	novel_in_catalog	DUSP10	novel	2676	4	NA	NA	0	-17	no_combination_of_known_junctions	FALSE	canonical	1	1640	junction_1	119596.0	NA	3	1	TRUE	NA	NA	NA	C	coding	358	1077	153	1229	70.0	-1	True	AAGAAA	-26
PB.770.1	chr1	-	5673	28	novel_not_in_catalog	DENND4B	novel	2530	3	NA	NA	37	0	any annotated donor/acceptor	TRUE	canonical	1	58183	junction_27	103033.84451435076	NA	1	NA	TRUE	NA	NA	NA	B	coding	1496	4491	387	4877	0.0	58	True	AGTAAA	-20
PB.9715.1	chr6	+	932	6	novel_not_in_catalog	LY86	novel	1197	6	NA	NA	-47	-2	any annotated donor/acceptor	FALSE	canonical	1	1639	junction_1	129413.24750828255	NA	0	NA	TRUE	NA	NA	NA	A	coding	162	489	90	578	10.0	-695	False	AATAAA	-15
PB.9638.7	chr5	-	3495	6	incomplete-splice_match	UIMC1	ENST00000511320.5	2502	15	-26	61346	-26	2887	3prime_fragment	FALSE	canonical	1	95667	junction_5	122398.19289286913	NA	4	NA	TRUE	NA	NA	NA	C	coding	415	1248	137	1384	15.0	1	True	AATAGA	-20
PB.7106.12	chr2	-	1614	4	full-splice_match	MTERF4	ENST00000391980.6	1637	4	21	2	0	-2	multi-exon	FALSE	canonical	1	168828	junction_3	53118.23693317474	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	39	1184	30.0	-25	True	AATAAA	-19
PB.52.2	chr1	-	3710	6	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	235604.24386958737	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	83	937	25.0	-30	True	AATAAA	-20
PB.6273.4	chr19	+	2142	3	novel_in_catalog	ZNF584	novel	591	3	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	28262	junction_1	29932.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-18	True	AATAAA	-24
PB.6580.15	chr2	-	2510	2	novel_not_in_catalog	EVA1A	novel	589	4	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-15
PB.9368.9	chr5	+	3601	26	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-16	-7	any annotated donor/acceptor	TRUE	canonical	1	25482	junction_14	287365.5604466367	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	425	3079	30.0	-7	True	AATAAA	-14
PB.9368.8	chr5	+	3729	26	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-16	2	any annotated donor/acceptor	FALSE	canonical	1	25482	junction_14	287365.5604466367	NA	2	NA	TRUE	NA	NA	NA	C	coding	884	2655	425	3079	20.0	-7	True	AATAAA	-17
PB.3451.9	chr14	+	2834	3	full-splice_match	SOCS4	ENST00000555846.1	4110	3	-12	1288	6	-1288	multi-exon	FALSE	canonical	1	46043	junction_1	1006.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	456	1778	30.0	0	True	AATAAA	-21
PB.9638.4	chr5	-	1717	13	novel_in_catalog	UIMC1	novel	2570	15	NA	NA	-44	14	no_combination_of_known_junctions	FALSE	canonical	1	38887	junction_9	122306.20032692424	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	155	1471	40.0	-17	True	AATATA	-15
PB.10999.23	chr8	+	6675	39	full-splice_match	PCM1	ENST00000325083.12	6820	39	145	0	-5	0	multi-exon	FALSE	canonical	1	192825	junction_24	216079.1720245036	NA	0	NA	TRUE	NA	NA	NA	C	coding	2024	6075	295	6369	35.0	-8	True	AATAAA	-16
PB.9368.1	chr5	+	3996	26	novel_in_catalog	PAM	novel	570	2	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	211813.93862066773	NA	0	NA	TRUE	NA	NA	NA	C	coding	973	2922	425	3346	20.0	-7	True	AATAAA	-17
PB.9638.3	chr5	-	2533	15	full-splice_match	UIMC1	ENST00000511320.5	2502	15	-42	11	-42	5	multi-exon	FALSE	canonical	1	95667	junction_14	102310.27582151009	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	153	2312	35.0	-15	True	NA	NA
PB.9368.3	chr5	+	3616	24	novel_in_catalog	PAM	novel	570	2	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	70607	junction_23	261069.3094906637	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	421	2967	15.0	-3	True	AATAAA	-16
PB.9368.2	chr5	+	3466	24	novel_in_catalog	PAM	novel	570	2	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	1	236448	junction_14	250533.15842062802	NA	1	1	TRUE	NA	NA	NA	C	coding	799	2400	417	2816	20.0	1	True	AATAAA	-17
PB.9368.4	chr5	+	3940	25	novel_in_catalog	PAM	novel	570	2	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	1	70607	junction_24	241273.70568487095	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	420	3287	15.0	-2	True	AATAAA	-20
PB.9638.2	chr5	-	2625	15	novel_in_catalog	UIMC1	novel	2570	15	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	67218	junction_14	106793.23378152432	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	250	2409	60.0	-1	True	NA	NA
PB.8493.17	chr3	+	2838	19	full-splice_match	GFM1	ENST00000264263.9	3453	19	-24	639	-24	31	multi-exon	FALSE	canonical	1	15479	junction_6	185149.65270843063	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	63	2375	15.0	46	True	NA	NA
PB.9638.1	chr5	-	2596	15	full-splice_match	UIMC1	ENST00000377227.8	2570	15	-42	16	-42	-16	multi-exon	FALSE	canonical	1	13501	junction_14	116049.69020314056	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	176	2335	35.0	328	False	AATATA	-30
PB.8493.16	chr3	+	3482	19	full-splice_match	GFM1	ENST00000264263.9	3453	19	-29	0	-29	0	multi-exon	FALSE	canonical	1	15479	junction_6	185149.65270843063	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	68	2380	15.0	41	True	AATAAA	-13
PB.1033.2	chr1	-	2401	2	full-splice_match	PHLDA3	ENST00000367311.4	2640	2	116	123	116	-123	multi-exon	FALSE	canonical	1	633388	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	127	384	283	666	15.0	318	False	AATAAA	-17
PB.52.8	chr1	-	3694	6	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	-18	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	235604.24386958737	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	80	934	25.0	-27	True	AATAAA	-19
PB.1033.1	chr1	-	2660	2	full-splice_match	PHLDA3	ENST00000367311.4	2640	2	-21	1	-21	-1	multi-exon	FALSE	canonical	1	633388	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	127	384	420	803	30.0	-18	True	TATAAA	-16
PB.918.3	chr1	+	1272	6	full-splice_match	ATP1B1	ENST00000367815.8	1883	6	353	258	353	-258	multi-exon	FALSE	canonical	1	754063	junction_1	483917.8416154544	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	155	1066	75.0	-4643	False	ATTAAA	-43
PB.8493.15	chr3	+	2209	4	incomplete-splice_match	GFM1	ENST00000478576.5	2147	14	37	33919	-32	1733	3prime_fragment	FALSE	canonical	1	243185	junction_1	114157.3506554294	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	71	646	65.0	38	True	NA	NA
PB.11463.11	chr9	+	1987	10	novel_not_in_catalog	SNAPC3	novel	5680	9	NA	NA	-1	-822	any annotated donor/acceptor	FALSE	canonical	1	977	junction_9	127207.61477906021	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	13	1248	35.0	-8	True	AATAAA	-33
PB.52.9	chr1	-	3571	6	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	235604.24386958737	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	29	883	25.0	-8	True	AATAAA	-19
PB.10639.4	chr7	-	5186	18	full-splice_match	SEMA3C	ENST00000265361.7	5174	18	-13	1	-13	-1	multi-exon	FALSE	canonical	1	316863	junction_14	80751.44721905806	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	576	2831	20.0	-4	True	AATAAA	-17
PB.9339.7	chr5	+	3195	9	novel_not_in_catalog	POLR3G	novel	339	2	NA	NA	-1	-166	any annotated donor/acceptor	FALSE	canonical	1	2226	junction_2	56167.28974623486	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	277	948	40.0	-1	True	ATTAAA	-8
PB.9339.6	chr5	+	3207	9	novel_not_in_catalog	POLR3G	novel	339	2	NA	NA	-1	-166	any annotated donor/acceptor	FALSE	canonical	1	2278	junction_2	59009.54495249053	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	460	960	40.0	-1	True	ATTAAA	-8
PB.11703.2	chr9	+	2091	6	full-splice_match	TMEM38B	ENST00000374692.7	3525	6	-14	1448	-14	1085	multi-exon	FALSE	canonical	1	229227	junction_1	27210.80069090213	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	222	1007	30.0	-12	True	ATTAAA	-20
PB.11703.3	chr9	+	2876	7	novel_not_in_catalog	TMEM38B	novel	502	3	NA	NA	-9	-798	any annotated donor/acceptor	FALSE	canonical	1	8986	junction_3	126673.70573072991	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	615	1142	35.0	-7	True	ATTAAA	-33
PB.11703.1	chr9	+	2235	6	full-splice_match	TMEM38B	ENST00000374692.7	3525	6	-22	1312	-22	1221	multi-exon	FALSE	canonical	1	229227	junction_1	27210.80069090213	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	230	1015	80.0	-20	True	TATAAA	-19
PB.11703.6	chr9	+	3527	6	full-splice_match	TMEM38B	ENST00000374692.7	3525	6	3	-5	3	5	multi-exon	FALSE	canonical	1	229227	junction_1	27210.80069090213	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	205	990	25.0	5	True	AATAAA	-22
PB.8493.11	chr3	+	3221	18	full-splice_match	GFM1	ENST00000486715.5	3721	18	292	208	-27	-202	multi-exon	FALSE	canonical	1	243185	junction_1	122751.98640564996	NA	6	2	TRUE	NA	NA	NA	C	coding	751	2256	66	2321	25.0	43	True	AATGAA	-16
PB.11703.4	chr9	+	2612	5	novel_in_catalog	TMEM38B	novel	502	3	NA	NA	-3	-798	no_combination_of_known_junctions	FALSE	canonical	1	8897	junction_4	116215.32827794275	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	211	663	35.0	-1	True	ATTAAA	-33
PB.11703.5	chr9	+	2729	6	full-splice_match	TMEM38B	ENST00000374692.7	3525	6	-2	798	-2	-798	multi-exon	FALSE	canonical	1	229227	junction_1	27210.80069090213	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	210	995	35.0	0	True	ATTAAA	-33
PB.11703.8	chr9	+	2454	4	novel_in_catalog	TMEM38B	novel	502	3	NA	NA	0	-798	no_combination_of_known_junctions	FALSE	canonical	1	4805	junction_2	121103.1860962653	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	208	720	35.0	2	True	ATTAAA	-33
PB.8493.10	chr3	+	6445	18	full-splice_match	GFM1	ENST00000486715.5	3721	18	281	-3005	31	3005	multi-exon	FALSE	canonical	1	243185	junction_1	122751.98640564996	NA	2	NA	TRUE	NA	NA	NA	C	coding	751	2256	77	2332	20.0	32	True	AATAAA	-29
PB.11463.10	chr9	+	2531	10	full-splice_match	SNAPC3	ENST00000490969.5	2524	10	-2	-5	-2	5	multi-exon	FALSE	canonical	1	214016	junction_9	70752.56112050722	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	14	1249	10.0	-9	True	TATAAA	-21
PB.8779.36	chr4	+	1779	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-1	-42	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	201210.13564651483	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	198	1778	70.0	-1	True	NA	NA
PB.12074.1	chrX	-	1258	3	full-splice_match	PRAF2	ENST00000553851.2	1334	3	69	7	-13	-7	multi-exon	FALSE	canonical	1	258224	junction_2	52688.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	178	537	16	552	25.0	-1	True	AATAAA	-22
PB.4332.3	chr16	-	4028	24	full-splice_match	XPO6	ENST00000304658.9	4422	24	410	-16	17	0	multi-exon	TRUE	canonical	1	101678	junction_17	334262.2172504615	NA	0	NA	TRUE	NA	NA	NA	A	coding	1125	3378	92	3469	20.0	600	False	AATAAA	-22
PB.2056.26	chr11	+	3858	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	6	19	intron_retention	FALSE	canonical	1	18955	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	3	True	AATAAA	-20
PB.2056.25	chr11	+	3691	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1285	3732	5	-872	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	2	True	AGTAAA	-6
PB.2056.24	chr11	+	7051	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1285	372	5	-334	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.2056.23	chr11	+	1780	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	3	27	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-28
PB.2056.22	chr11	+	7422	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	3	3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-15
PB.2056.21	chr11	+	1990	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	5435	3	64	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.3108.2	chr13	+	1836	3	full-splice_match	RFXAP	ENST00000255476.2	2304	3	-2	470	-2	-463	multi-exon	FALSE	canonical	1	92292	junction_1	10583.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	137	955	65.0	-20	True	NA	NA
PB.9701.2	chr6	+	3160	12	novel_not_in_catalog	RIPK1	novel	1481	8	NA	NA	70	-1146	any annotated donor/acceptor	FALSE	canonical	1	1368	junction_2	76112.18765200191	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	322	2460	35.0	-14	True	ATTAAA	-26
PB.9701.3	chr6	+	2939	11	full-splice_match	RIPK1	ENST00000259808.8	4160	11	70	1151	70	-1151	multi-exon	FALSE	canonical	1	32151	junction_1	54095.10886216978	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	229	2244	35.0	-14	True	ATTAAA	-21
PB.9701.1	chr6	+	4017	11	novel_in_catalog	RIPK1	novel	1481	8	NA	NA	-26	0	no_combination_of_known_junctions	FALSE	canonical	1	19191	junction_1	57447.939113687964	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	168	2171	25.0	-2	True	AATAAA	-13
PB.9701.6	chr6	+	4068	11	full-splice_match	RIPK1	ENST00000259808.8	4160	11	92	0	92	0	multi-exon	FALSE	canonical	1	32151	junction_1	54095.10886216978	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	207	2222	25.0	8	True	AATAAA	-13
PB.2265.6	chr11	-	4210	7	novel_in_catalog	KDELC2	novel	4312	8	NA	NA	-23	-13	no_combination_of_known_junctions	FALSE	canonical	1	3239	junction_1	79238.3650248133	NA	3	NA	TRUE	NA	NA	NA	C	coding	472	1419	90	1508	70.0	134	False	AATAAA	-12
PB.2056.29	chr11	+	5725	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	2980	3	519	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5420	False	AATAAA	-15
PB.2056.28	chr11	+	2317	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	3559	2832	-527	28	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-4841	False	AATAAA	-29
PB.4291.2	chr16	-	3854	5	full-splice_match	THUMPD1	ENST00000381337.6	4122	5	263	5	-6	-5	multi-exon	FALSE	canonical	1	147133	junction_1	64987.8297318044	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	83	1144	40.0	-7	True	AATAAA	-11
PB.4291.1	chr16	-	4349	4	full-splice_match	THUMPD1	ENST00000396083.6	2624	4	-19	-1706	0	-5	multi-exon	FALSE	canonical	1	151391	junction_3	62715.72459032016	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	77	1138	40.0	-1	True	AATAAA	-11
PB.415.3	chr1	+	2554	15	novel_in_catalog	SCP2	novel	2811	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	40499	junction_13	421403.48052883515	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	135	1526	5.0	-23	True	ATTAAA	-16
PB.4291.7	chr16	-	1988	5	full-splice_match	THUMPD1	ENST00000381337.6	4122	5	254	1880	-15	-169	multi-exon	FALSE	canonical	1	147133	junction_1	64987.8297318044	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	92	1153	80.0	-16	True	NA	NA
PB.4291.6	chr16	-	2480	4	full-splice_match	THUMPD1	ENST00000396083.6	2624	4	-25	169	-6	-169	multi-exon	FALSE	canonical	1	151391	junction_3	62715.72459032016	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	83	1144	80.0	-7	True	NA	NA
PB.4291.5	chr16	-	2622	4	full-splice_match	THUMPD1	ENST00000396083.6	2624	4	-19	21	0	-21	multi-exon	FALSE	canonical	1	151391	junction_3	62715.72459032016	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	77	1138	75.0	-1	True	NA	NA
PB.4291.4	chr16	-	2130	5	full-splice_match	THUMPD1	ENST00000381337.6	4122	5	264	1728	-5	-17	multi-exon	FALSE	canonical	1	147133	junction_1	64987.8297318044	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	82	1143	80.0	-6	True	NA	NA
PB.5479.4	chr18	-	2939	16	full-splice_match	MBD1	ENST00000590208.5	2913	16	162	-188	-1	-2	multi-exon	FALSE	canonical	1	88258	junction_1	133884.6036678851	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	186	2153	15.0	-17	True	TTTAAA	-34
PB.5479.5	chr18	-	4491	15	full-splice_match	MBD1	ENST00000398493.5	1845	15	-24	-2622	-3	0	multi-exon	FALSE	canonical	1	78830	junction_5	130593.49741617212	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	188	1837	20.0	-19	True	TTTAAA	-30
PB.5479.6	chr18	-	2843	16	full-splice_match	MBD1	ENST00000347968.7	3091	16	248	0	-5	0	multi-exon	FALSE	canonical	1	78830	junction_6	145209.37773787967	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	190	1839	20.0	-21	True	TTTAAA	-30
PB.4291.8	chr16	-	1921	4	full-splice_match	THUMPD1	ENST00000396083.6	2624	4	-24	727	-5	710	multi-exon	FALSE	canonical	1	151391	junction_3	62715.72459032016	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	82	1143	55.0	-6	True	NA	NA
PB.358.10	chr1	+	2557	5	incomplete-splice_match	DPH2	ENST00000255108.7	2472	6	-5	0	-1	0	intron_retention	FALSE	canonical	1	262590	junction_2	45016.13127813184	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	178	1665	10.0	-11	True	AATAAA	-15
PB.5479.1	chr18	-	2730	16	novel_in_catalog	MBD1	novel	2532	15	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	1	45036	junction_1	140760.62065860452	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	178	2031	30.0	-9	True	NA	NA
PB.5479.2	chr18	-	3239	17	full-splice_match	MBD1	ENST00000269468.9	3259	17	20	0	13	0	multi-exon	FALSE	canonical	1	120044	junction_1	127787.27421651775	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	418	2235	20.0	12	True	TTTAAA	-30
PB.5479.3	chr18	-	4666	16	full-splice_match	MBD1	ENST00000591416.5	4905	16	242	-3	-6	-2	multi-exon	FALSE	canonical	1	211866	junction_6	110419.86402446899	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	191	2008	15.0	-22	True	TTTAAA	-34
PB.1118.8	chr1	+	4055	14	full-splice_match	RPS6KC1	ENST00000543354.5	4082	14	26	1	4	-1	multi-exon	FALSE	canonical	1	6827	junction_2	56649.12889745294	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	569	3226	25.0	1	True	AATAAA	-14
PB.8080.6	chr3	-	5605	27	novel_in_catalog	SMARCC1	novel	6375	28	NA	NA	-2	-622	no_combination_of_known_junctions	FALSE	canonical	1	8717	junction_10	201351.22688097745	NA	2	NA	TRUE	NA	NA	NA	C	coding	1067	3204	87	3290	15.0	9	True	AATAAA	-18
PB.8493.19	chr3	+	5000	34	novel_not_in_catalog	GFM1	novel	3721	18	NA	NA	-3	136554	intron_retention	FALSE	canonical	1	1291	junction_21	261431.15382206198	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	860	2449	15.0	67	True	AATATA	-16
PB.11628.8	chr9	+	2560	22	novel_in_catalog	NAA35	novel	2649	23	NA	NA	8	15	no_combination_of_known_junctions	FALSE	canonical	1	2528	junction_12	94351.13684291788	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	90	2207	35.0	-414	False	AATAAA	-35
PB.11628.9	chr9	+	2286	18	novel_in_catalog	NAA35	novel	2649	23	NA	NA	92	-5648	combination_of_known_junctions	FALSE	canonical	1	78104	junction_1	64781.15387623419	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	607	2286	90.0	-23	True	NA	NA
PB.11628.6	chr9	+	3112	23	novel_not_in_catalog	NAA35	novel	2649	23	NA	NA	0	367	any annotated donor/acceptor	FALSE	canonical	1	21662	junction_1	84985.09250426617	NA	2	NA	TRUE	NA	NA	NA	C	coding	725	2178	230	2407	20.0	36	True	ATTAAA	-17
PB.5944.1	chr19	+	988	6	full-splice_match	TBCB	ENST00000221855.7	1473	6	482	3	-15	-3	multi-exon	FALSE	canonical	1	1441339	junction_1	278639.5027008195	NA	0	NA	TRUE	NA	NA	NA	A	coding	244	735	94	828	40.0	-17	True	ATTAAA	-17
PB.11628.4	chr9	+	3000	23	full-splice_match	NAA35	ENST00000361671.9	2649	23	16	-367	16	367	multi-exon	TRUE	canonical	1	107798	junction_1	74595.69749225066	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	118	2295	20.0	16	True	ATTAAA	-17
PB.8493.18	chr3	+	2589	18	full-splice_match	GFM1	ENST00000486715.5	3721	18	295	837	-24	-161	multi-exon	FALSE	canonical	1	243185	junction_1	122751.98640564996	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	63	2318	50.0	46	True	AATAAA	-26
PB.11628.2	chr9	+	1785	18	incomplete-splice_match	NAA35	ENST00000361671.9	2649	23	28	5648	-8	-5648	3prime_fragment	FALSE	canonical	1	107798	junction_1	60193.3418555327	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1680	106	1785	90.0	28	True	NA	NA
PB.11628.3	chr9	+	3119	23	novel_in_catalog	NAA35	novel	2649	23	NA	NA	85	-10	combination_of_known_junctions	FALSE	canonical	1	78104	junction_1	77867.51834052757	NA	6	NA	TRUE	NA	NA	NA	C	coding	725	2178	614	2791	55.0	-30	True	AATAAA	-10
PB.11628.1	chr9	+	2612	23	full-splice_match	NAA35	ENST00000361671.9	2649	23	27	10	-9	-10	multi-exon	FALSE	canonical	1	107798	junction_1	74595.69749225066	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	107	2284	55.0	27	True	AATAAA	-10
PB.1992.1	chr11	-	2937	18	full-splice_match	MTA2	ENST00000278823.6	3058	18	65	56	65	-55	multi-exon	FALSE	canonical	1	596166	junction_17	189104.756745748	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	326	2332	25.0	14	True	AATAAA	-21
PB.1992.3	chr11	-	2680	18	full-splice_match	MTA2	ENST00000527204.5	2265	18	212	-627	212	0	multi-exon	FALSE	canonical	1	86396	junction_17	281981.57244840934	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	533	2020	10.0	2163	False	AATAAA	-15
PB.1992.4	chr11	-	2858	19	novel_not_in_catalog	MTA2	novel	3058	18	NA	NA	-25	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	309249.5309178553	NA	2	2	TRUE	NA	NA	NA	C	coding	668	2007	416	2422	10.0	-1	True	AATAAA	-15
PB.1992.5	chr11	-	2666	18	full-splice_match	MTA2	ENST00000278823.6	3058	18	166	226	166	-225	multi-exon	FALSE	canonical	1	596166	junction_17	189104.756745748	NA	2	NA	TRUE	NA	NA	NA	C	coding	668	2007	225	2231	10.0	-5	True	NA	NA
PB.9275.1	chr5	+	3444	1	intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	14	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.10137.6	chr6	+	1835	11	full-splice_match	QRSL1	ENST00000369046.8	4106	11	3	2268	3	-2268	multi-exon	FALSE	canonical	1	90432	junction_1	66891.00161673468	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	102	1688	65.0	3	True	NA	NA
PB.3373.30	chr14	+	5129	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	24	4451	4	139	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	295	4800	50.0	9	True	AATAAA	-17
PB.10137.4	chr6	+	4103	11	full-splice_match	QRSL1	ENST00000369046.8	4106	11	0	3	0	-3	multi-exon	FALSE	canonical	1	90432	junction_1	66891.00161673468	NA	2	NA	TRUE	NA	NA	NA	C	coding	528	1587	105	1691	35.0	0	True	ATTAAA	-21
PB.10137.5	chr6	+	2194	7	full-splice_match	QRSL1	ENST00000369044.1	2158	7	-36	0	0	0	multi-exon	FALSE	canonical	1	90432	junction_1	79679.2225147532	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	105	1064	95.0	0	True	NA	NA
PB.10137.2	chr6	+	3237	11	full-splice_match	QRSL1	ENST00000369046.8	4106	11	-12	881	-12	-881	multi-exon	FALSE	canonical	1	90432	junction_1	66891.00161673468	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	117	1703	55.0	-12	True	NA	NA
PB.10137.3	chr6	+	2061	11	full-splice_match	QRSL1	ENST00000369046.8	4106	11	-1	2046	-1	-2046	multi-exon	FALSE	canonical	1	90432	junction_1	66891.00161673468	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	106	1692	30.0	-1	True	NA	NA
PB.11286.4	chr8	+	3639	8	full-splice_match	FZD6	ENST00000523739.5	2774	8	3	-868	3	3	multi-exon	FALSE	canonical	1	10024	junction_2	97395.03787280386	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	268	2286	30.0	-30	True	AATAAA	-15
PB.10137.1	chr6	+	3871	11	full-splice_match	QRSL1	ENST00000369046.8	4106	11	4	231	4	-231	multi-exon	FALSE	canonical	1	90432	junction_1	66891.00161673468	NA	2	NA	TRUE	NA	NA	NA	C	coding	528	1587	101	1687	40.0	4	True	NA	NA
PB.587.4	chr1	-	3999	16	novel_not_in_catalog	WDR47	novel	4134	15	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	1180	junction_11	53385.94588774174	NA	2	1	TRUE	NA	NA	NA	C	coding	845	2538	250	2787	25.0	0	True	AATAAA	-16
PB.11286.8	chr8	+	3808	8	novel_not_in_catalog	FZD6	novel	3719	7	NA	NA	0	2	intron_retention	FALSE	canonical	1	802	junction_2	125792.78154057285	NA	2	1	TRUE	NA	NA	NA	C	coding	519	1560	897	2456	35.0	-22	True	AATAAA	-14
PB.11286.9	chr8	+	3128	2	incomplete-splice_match	FZD6	ENST00000523933.5	1472	7	11	27008	0	-27008	intron_retention	FALSE	canonical	1	191219	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-22	True	NA	NA
PB.3681.7	chr14	+	2000	12	full-splice_match	EIF5	ENST00000216554.7	5945	12	235	3710	0	-41	multi-exon	FALSE	canonical	1	259288	junction_6	646631.7152561091	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	442	1737	50.0	0	True	NA	NA
PB.3681.6	chr14	+	2894	12	full-splice_match	EIF5	ENST00000216554.7	5945	12	222	2829	-13	-190	multi-exon	FALSE	canonical	1	259288	junction_6	646631.7152561091	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	455	1750	25.0	-13	True	AAAAAG	-21
PB.9269.9	chr5	+	3069	18	full-splice_match	RAD17	ENST00000616683.4	3057	18	-12	0	-12	0	multi-exon	FALSE	canonical	1	33272	junction_10	55502.58705127251	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	550	2562	10.0	-3670	False	ATTAAA	-12
PB.9269.8	chr5	+	3542	19	novel_not_in_catalog	RAD17	novel	464	5	NA	NA	-5	0	intron_retention	FALSE	canonical	1	998	junction_6	66064.519377221	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	1545	3035	10.0	-17	True	ATTAAA	-12
PB.9260.1	chr5	+	1386	9	incomplete-splice_match	SREK1	ENST00000334121.10	6781	12	111	12814	-7	-14	3prime_fragment	FALSE	canonical	1	227241	junction_2	180846.4276359572	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1338	49	1386	65.0	26	True	AAAAAG	-21
PB.9269.5	chr5	+	2938	18	novel_in_catalog	RAD17	novel	464	5	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	685	junction_1	65627.19077599459	NA	3	NA	TRUE	NA	NA	NA	C	coding	670	2013	420	2432	10.0	-24	True	ATTAAA	-11
PB.3681.1	chr14	+	3749	12	novel_in_catalog	EIF5	novel	521	3	NA	NA	11	-59	intron_retention	FALSE	canonical	1	21776	junction_2	770468.6732546584	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	337	1632	15.0	-34	True	ATTAAA	-16
PB.9269.7	chr5	+	3622	16	full-splice_match	RAD17	ENST00000358030.6	2648	16	-974	0	1	0	multi-exon	FALSE	canonical	1	19698	junction_1	60175.11518545039	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	1598	3115	10.0	-3657	False	ATTAAA	-12
PB.9269.6	chr5	+	4931	16	novel_in_catalog	RAD17	novel	464	5	NA	NA	-5	1	intron_retention	FALSE	canonical	1	33272	junction_8	54200.61911880917	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	2409	4421	5.0	-17	True	ATTAAA	-15
PB.9269.1	chr5	+	2922	17	novel_in_catalog	RAD17	novel	464	5	NA	NA	-20	0	intron_retention	FALSE	canonical	1	2322	junction_16	64109.07538934986	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	461	2158	10.0	-32	True	ATTAAA	-12
PB.9260.2	chr5	+	3944	12	full-splice_match	SREK1	ENST00000334121.10	6781	12	106	2731	9	5	multi-exon	FALSE	canonical	1	227241	junction_2	168126.05660383825	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	54	1928	30.0	21	True	AATAAA	-18
PB.9269.3	chr5	+	3079	19	full-splice_match	RAD17	ENST00000354868.9	3060	19	-22	3	-16	-1	multi-exon	FALSE	canonical	1	8432	junction_2	65377.05481125018	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	561	2573	10.0	-28	True	ATTAAA	-11
PB.9269.2	chr5	+	2827	17	novel_in_catalog	RAD17	novel	464	5	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	3095	junction_14	63857.99555055244	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	460	2322	10.0	-31	True	ATTAAA	-10
PB.3681.3	chr14	+	2574	12	full-splice_match	EIF5	ENST00000216554.7	5945	12	234	3137	-1	-498	multi-exon	FALSE	canonical	1	259288	junction_6	646631.7152561091	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	443	1738	35.0	-1	True	AATAAA	-21
PB.1087.3	chr1	+	1986	10	full-splice_match	CD55	ENST00000367064.8	2892	10	243	663	-24	-33	multi-exon	FALSE	canonical	1	201639	junction_9	518153.7491122319	NA	6	NA	TRUE	NA	NA	NA	C	coding	381	1146	148	1293	55.0	-9648	False	TTTAAA	-30
PB.3681.2	chr14	+	956	7	incomplete-splice_match	EIF5	ENST00000216554.7	5945	12	181	6677	-6	0	3prime_fragment	FALSE	canonical	1	259288	junction_6	572160.5739380677	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	459	496	954	80.0	-54	True	NA	NA
PB.646.1	chr1	+	1261	2	incomplete-splice_match	MAN1A2	ENST00000356554.7	8576	13	4	126459	4	-18217	3prime_fragment	FALSE	canonical	1	311019	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	528	732	1259	70.0	-9	True	NA	NA
PB.10999.18	chr8	+	2948	17	incomplete-splice_match	PCM1	ENST00000519253.5	6443	39	-47	64516	-9	1074	3prime_fragment	FALSE	canonical	1	203848	junction_6	112511.45351819674	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2649	299	2947	50.0	-12	True	NA	NA
PB.8038.25	chr3	+	3198	16	full-splice_match	CTNNB1	ENST00000642315.1	2890	16	-27	-281	4	214	multi-exon	FALSE	canonical	1	29546	junction_1	828361.2160587808	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	315	2660	50.0	1	True	AATAAA	-38
PB.7042.32	chr2	-	2315	6	novel_not_in_catalog	WDFY1	novel	4660	12	NA	NA	31	2788	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	143001.2688357694	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	21	602	20.0	-6	True	AATAAA	-12
PB.10443.1	chr7	-	5168	1	intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	17	NA	NA	NA	NA	NA	A	coding	735	2208	1986	4193	70.0	NA	False	NA	NA
PB.9984.9	chr6	-	2327	10	novel_in_catalog	TFEB	novel	1626	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	880	junction_9	122282.05054082605	NA	1	NA	TRUE	NA	NA	NA	B	coding	476	1431	279	1709	5.0	-1	True	AGTAAA	-12
PB.9984.8	chr6	-	1985	9	novel_not_in_catalog	TFEB	novel	1626	7	NA	NA	158	0	any annotated donor/acceptor	FALSE	canonical	1	3875	junction_6	131805.45947051805	NA	0	NA	TRUE	NA	NA	NA	B	coding	411	1236	131	1366	5.0	-7	True	AGTAAA	-13
PB.4923.1	chr17	+	1860	5	full-splice_match	MRM1	ENST00000614766.4	1857	5	-4	1	-4	-1	multi-exon	FALSE	canonical	1	78198	junction_2	14871.052703154543	NA	1	NA	TRUE	NA	NA	NA	A	coding	353	1062	244	1305	20.0	-15	False	NA	NA
PB.2649.3	chr12	+	913	9	full-splice_match	COPZ1	ENST00000262061.6	1897	9	6	978	2	-8	multi-exon	FALSE	canonical	1	1386904	junction_1	290523.91819596797	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	32	565	30.0	-7	True	ATTAAA	-8
PB.9984.5	chr6	-	2263	9	novel_in_catalog	TFEB	novel	1626	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2116	junction_8	103610.87725648971	NA	0	NA	TRUE	NA	NA	NA	B	coding	476	1431	213	1643	5.0	-1	True	AGTAAA	-14
PB.477.1	chr1	+	3332	6	full-splice_match	TYW3	ENST00000370867.7	3430	6	98	0	7	0	multi-exon	FALSE	canonical	1	295335	junction_1	46632.11438311585	NA	3	NA	TRUE	NA	NA	NA	C	coding	221	666	106	771	25.0	-1064	False	NA	NA
PB.10999.12	chr8	+	5275	28	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	6	3191	any annotated donor/acceptor	FALSE	canonical	1	45228	junction_24	181912.4769176074	NA	8	1	TRUE	NA	NA	NA	C	coding	1495	4488	306	4793	25.0	-5672	False	NA	NA
PB.9984.6	chr6	-	2177	10	novel_not_in_catalog	TFEB	novel	1626	7	NA	NA	997	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	128484.18090609874	NA	0	NA	TRUE	NA	NA	NA	B	coding	476	1431	127	1557	5.0	7896	False	AGTAAA	-14
PB.9984.1	chr6	-	3592	9	incomplete-splice_match	TFEB	ENST00000230323.8	2354	10	892	2	233	0	5prime_fragment	FALSE	canonical	1	31719	junction_8	94288.14640869499	NA	1	1	TRUE	NA	NA	NA	B	coding	476	1431	1543	2973	5.0	12	True	AGTAAA	-13
PB.8038.27	chr3	+	3188	16	full-splice_match	CTNNB1	ENST00000450969.6	2764	16	114	-538	83	1	multi-exon	FALSE	canonical	1	29546	junction_1	814347.7269054431	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	205	2550	10.0	-3882	False	ATTAAA	-16
PB.9984.3	chr6	-	2195	9	novel_in_catalog	TFEB	novel	1626	7	NA	NA	145	0	combination_of_known_junctions	FALSE	canonical	1	14872	junction_8	99582.6892147143	NA	2	NA	TRUE	NA	NA	NA	B	coding	476	1431	144	1574	0.0	9309	False	AGTAAA	-15
PB.9984.2	chr6	-	2354	9	novel_in_catalog	TFEB	novel	1626	7	NA	NA	14	0	intron_retention	FALSE	canonical	1	10231	junction_8	101046.46105721615	NA	2	NA	TRUE	NA	NA	NA	B	coding	476	1431	303	1733	0.0	-105	False	AGTAAA	-15
PB.7932.1	chr3	+	876	3	full-splice_match	BRK1	ENST00000530758.1	1233	3	84	273	84	-273	multi-exon	FALSE	canonical	1	3116954	junction_1	119422.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-5	True	AATAAA	-14
PB.377.5	chr1	+	1426	4	full-splice_match	AKR1A1	ENST00000471651.1	1018	4	-170	-238	44	-199	multi-exon	FALSE	canonical	1	1011660	junction_1	264803.52982163965	NA	3	NA	TRUE	NA	NA	NA	C	coding	119	360	265	624	95.0	1	True	NA	NA
PB.8038.26	chr3	+	3172	14	novel_in_catalog	CTNNB1	novel	3278	16	NA	NA	4	-2	intron_retention	FALSE	canonical	1	11715	junction_13	1006296.4551697159	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	315	2477	10.0	1	True	ATTAAA	-13
PB.10552.1	chr7	-	2736	4	full-splice_match	FKBP9P1	ENST00000455909.5	2451	4	-286	1	-286	-1	multi-exon	FALSE	canonical	1	2792	junction_3	2562.224597666818	NA	1	NA	TRUE	NA	NA	NA	A	coding	142	429	734	1162	15.0	-1	True	AATAAA	-43
PB.8038.21	chr3	+	5269	7	incomplete-splice_match	CTNNB1	ENST00000644138.1	2777	13	0	5870	0	-4427	3prime_fragment	FALSE	canonical	1	1458507	junction_1	451576.4332202431	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	215	1318	85.0	0	True	NA	NA
PB.8038.20	chr3	+	2662	13	full-splice_match	CTNNB1	ENST00000644138.1	2777	13	0	115	0	114	multi-exon	FALSE	canonical	1	1458507	junction_1	504858.3674827567	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	215	2323	25.0	0	True	AATAAA	-14
PB.10273.5	chr6	-	2428	1	genic	PPIL4	novel	NA	NA	NA	NA	-20	-38356	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-24	True	AAAAAG	-19
PB.10273.4	chr6	-	1336	13	full-splice_match	PPIL4	ENST00000253329.2	2232	13	-19	915	-19	-373	multi-exon	FALSE	canonical	1	194349	junction_12	87359.85570754485	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1284	53	1336	65.0	-23	True	AAGAAA	-12
PB.9081.3	chr4	+	2617	3	full-splice_match	CDKN2AIP	ENST00000504169.1	2721	3	99	5	-7	-5	multi-exon	FALSE	canonical	1	136619	junction_2	22092.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	109	1851	20.0	-4	True	ATTAAA	-25
PB.9081.2	chr4	+	3094	2	full-splice_match	CDKN2AIP	ENST00000510928.1	860	2	-62	-2172	0	-5	multi-exon	FALSE	canonical	1	180804	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	970	2328	20.0	-1	True	ATTAAA	-25
PB.10273.1	chr6	-	5292	13	full-splice_match	PPIL4	ENST00000253329.2	2232	13	4	-3064	4	3064	multi-exon	FALSE	canonical	1	194349	junction_12	87359.85570754485	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	30	1508	25.0	0	True	NA	NA
PB.9081.4	chr4	+	2405	3	full-splice_match	CDKN2AIP	ENST00000504169.1	2721	3	45	271	1	-2	multi-exon	FALSE	canonical	1	136619	junction_2	22092.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	163	1905	30.0	0	True	AATAAA	-23
PB.10273.3	chr6	-	2045	13	full-splice_match	PPIL4	ENST00000253329.2	2232	13	4	183	4	-183	multi-exon	FALSE	canonical	1	194349	junction_12	87359.85570754485	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	30	1508	15.0	0	True	NA	NA
PB.10273.2	chr6	-	2223	13	full-splice_match	PPIL4	ENST00000253329.2	2232	13	7	2	7	-2	multi-exon	FALSE	canonical	1	194349	junction_12	87359.85570754485	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	27	1505	30.0	3	True	NA	NA
PB.9081.9	chr4	+	3507	3	full-splice_match	CDKN2AIP	ENST00000302350.4	2646	3	4	-865	4	865	multi-exon	FALSE	canonical	1	136788	junction_2	22008.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	894	1871	20.0	3	True	AATAAA	-18
PB.9081.8	chr4	+	2255	3	full-splice_match	CDKN2AIP	ENST00000302350.4	2646	3	3	388	3	-119	multi-exon	FALSE	canonical	1	136788	junction_2	22008.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	895	1872	40.0	2	True	AATAAA	-13
PB.6964.11	chr2	+	2610	9	incomplete-splice_match	NRP2	ENST00000357118.8	3367	16	-781	33447	-21	11	3prime_fragment	FALSE	canonical	1	152921	junction_8	21642.699681416827	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	813	2480	30.0	0	True	NA	NA
PB.3275.20	chr13	+	2525	12	novel_in_catalog	TFDP1	novel	804	7	NA	NA	-11	-81	combination_of_known_junctions	FALSE	canonical	1	23352	junction_1	194951.47507605725	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	171	1403	40.0	-104	False	AATAAA	-24
PB.10921.3	chr7	+	2481	3	novel_not_in_catalog	REPIN1	novel	583	2	NA	NA	4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	57431.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	1	1389	15.0	-4912	False	AATAAA	-14
PB.10921.2	chr7	+	3131	3	full-splice_match	REPIN1	ENST00000489432.6	2058	3	24	-1097	2	-2	multi-exon	FALSE	canonical	1	159539	junction_1	8821.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	160	2034	10.0	2	True	AATAAA	-19
PB.10921.1	chr7	+	2923	2	full-splice_match	REPIN1	ENST00000444957.3	2969	2	39	7	3	-2	multi-exon	FALSE	canonical	1	114862	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	161	1831	15.0	7	True	AATAAA	-14
PB.9100.2	chr4	-	2447	15	novel_in_catalog	SORBS2	novel	3368	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	113340	junction_10	75459.01034583244	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	664	2142	85.0	-1	True	AAGAAA	-39
PB.10921.7	chr7	+	4144	3	novel_in_catalog	REPIN1	novel	583	2	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	76730	junction_2	41404.5	NA	2	1	TRUE	NA	NA	NA	C	coding	556	1671	1382	3052	15.0	0	True	AATAAA	-14
PB.10921.6	chr7	+	4000	2	full-splice_match	REPIN1	ENST00000473391.1	1064	2	6	-2942	4	-495	multi-exon	FALSE	canonical	1	159539	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	1731	3401	10.0	-6	True	NA	NA
PB.10921.5	chr7	+	3283	4	full-splice_match	REPIN1	ENST00000397281.6	3292	4	8	1	-2	-1	multi-exon	FALSE	canonical	1	61827	junction_2	42981.992138827416	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	515	2185	10.0	-4910	False	AATAAA	-20
PB.10921.4	chr7	+	3086	3	novel_in_catalog	REPIN1	novel	583	2	NA	NA	-3	-1	no_combination_of_known_junctions	FALSE	canonical	1	5374	junction_1	35678.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	556	1671	318	1988	10.0	-4911	False	AATAAA	-20
PB.10568.6	chr7	+	2905	2	full-splice_match	ZNF92	ENST00000431504.1	2947	2	-8	50	-7	-6	multi-exon	FALSE	canonical	1	11729	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	173	1705	35.0	-50	False	AATAAA	-13
PB.10568.7	chr7	+	2932	4	full-splice_match	ZNF92	ENST00000328747.11	3210	4	39	239	0	-195	multi-exon	FALSE	canonical	1	76078	junction_1	16462.287224643685	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	161	1921	70.0	-43	False	NA	NA
PB.10568.4	chr7	+	3195	4	full-splice_match	ZNF92	ENST00000328747.11	3210	4	25	-10	-14	0	multi-exon	FALSE	canonical	1	76078	junction_1	16462.287224643685	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	175	1935	35.0	-57	False	ATTAAA	-20
PB.10568.5	chr7	+	3009	3	full-splice_match	ZNF92	ENST00000450302.2	2957	3	-50	-2	-7	2	multi-exon	FALSE	canonical	1	7937	junction_1	54232.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	248	1801	30.0	-50	False	AATAAA	-21
PB.10568.2	chr7	+	3068	3	full-splice_match	ZNF92	ENST00000357512.3	3124	3	56	0	16	0	multi-exon	FALSE	canonical	1	5214	junction_2	35432.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	144	1808	35.0	0	True	ATTAAA	-20
PB.8310.1	chr3	-	2364	1	full-splice_match	AC093010.3	ENST00000570269.2	15214	1	11360	1490	11360	-1490	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-2118	False	NA	NA
PB.10568.1	chr7	+	3937	3	novel_in_catalog	ZNF92	novel	3210	4	NA	NA	0	-6	intron_retention	FALSE	canonical	1	76078	junction_1	20162.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	1082	2737	35.0	-82	False	AATAAA	-13
PB.813.2	chr1	-	4206	23	novel_not_in_catalog	ARHGEF2	novel	4080	22	NA	NA	-4485	0	intron_retention	FALSE	canonical	1	9909	junction_22	206442.8891214066	NA	2	1	TRUE	NA	NA	NA	C	coding	970	2913	206	3118	30.0	6	True	ATTAAA	-15
PB.813.3	chr1	-	4142	23	novel_not_in_catalog	ARHGEF2	novel	4080	22	NA	NA	-4354	-38	intron_retention	FALSE	canonical	1	17041	junction_22	198180.4879006489	NA	1	NA	TRUE	NA	NA	NA	C	coding	971	2916	179	3094	70.0	7745	False	NA	NA
PB.813.1	chr1	-	4116	23	novel_not_in_catalog	ARHGEF2	novel	4080	22	NA	NA	-4298	-38	intron_retention	FALSE	canonical	1	17041	junction_22	208139.08074443997	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	123	3068	70.0	5	True	NA	NA
PB.6743.2	chr2	+	3906	9	full-splice_match	PLEKHB2	ENST00000403716.5	4349	9	436	7	-19	-7	multi-exon	FALSE	canonical	1	46246	junction_8	322301.67321044113	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	125	835	15.0	-5053	False	ATTAAA	-17
PB.10476.6	chr7	+	3231	10	full-splice_match	FKBP9	ENST00000242209.8	3462	10	226	5	190	-4	multi-exon	FALSE	canonical	1	5230	junction_4	248928.44431058675	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	223	1656	20.0	137	False	AATAAA	-42
PB.5293.8	chr17	-	2033	5	novel_not_in_catalog	LGALS3BP	novel	1961	5	NA	NA	0	2	any annotated donor/acceptor	TRUE	canonical	1	78	junction_4	817155.6974299635	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	212	1711	30.0	-1	True	ATTAAA	-20
PB.813.5	chr1	-	4204	22	novel_in_catalog	ARHGEF2	novel	4080	22	NA	NA	-65	-38	intron_retention	FALSE	canonical	1	202904	junction_1	155848.0555576554	NA	0	NA	TRUE	NA	NA	NA	C	coding	996	2991	166	3156	70.0	5953	False	NA	NA
PB.5293.6	chr17	-	2155	7	novel_not_in_catalog	LGALS3BP	novel	1961	5	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	717362.2713331459	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	124	1833	30.0	-1	True	ATTAAA	-20
PB.11091.4	chr8	+	1963	5	full-splice_match	BAG4	ENST00000287322.4	4453	5	217	2273	217	140	multi-exon	FALSE	canonical	1	99660	junction_1	51015.94930203201	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	55	1428	30.0	-39	True	AATATA	-22
PB.5293.4	chr17	-	2468	5	full-splice_match	LGALS3BP	ENST00000585407.5	936	5	12	-1544	0	2	multi-exon	FALSE	canonical	1	1162053	junction_2	271344.03742147627	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	881	2146	30.0	-1	True	ATTAAA	-20
PB.5293.5	chr17	-	2234	6	full-splice_match	LGALS3BP	ENST00000262776.7	2405	6	154	17	-8	1	multi-exon	FALSE	canonical	1	1162053	junction_3	341311.4085930325	NA	3	NA	TRUE	NA	NA	NA	C	coding	585	1758	156	1913	30.0	-33	True	ATTAAA	-19
PB.5293.2	chr17	-	3186	5	novel_in_catalog	LGALS3BP	novel	1961	5	NA	NA	0	2	intron_retention	FALSE	canonical	1	1162053	junction_3	373276.5128323104	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	1008	2864	30.0	-1	True	ATTAAA	-20
PB.5293.3	chr17	-	2650	5	novel_in_catalog	LGALS3BP	novel	1961	5	NA	NA	-13	2	intron_retention	FALSE	canonical	1	5244	junction_3	696246.5213510945	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	1063	2328	30.0	-38	True	ATTAAA	-20
PB.1942.1	chr11	-	3774	8	novel_in_catalog	TNKS1BP1	novel	4336	7	NA	NA	-49	1	combination_of_known_junctions	FALSE	canonical	1	38254	junction_7	281563.60787899554	NA	1	NA	TRUE	NA	NA	NA	C	coding	1053	3162	156	3317	10.0	-1	True	AATAAA	-22
PB.5293.1	chr17	-	2376	7	novel_in_catalog	LGALS3BP	novel	1961	5	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	1	5966	junction_6	868402.3488018417	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	296	2053	25.0	-32	True	ATTAAA	-21
PB.1644.14	chr10	+	2869	14	novel_not_in_catalog	ADD3	novel	697	6	NA	NA	605	0	any annotated donor/acceptor	FALSE	canonical	1	418	junction_1	237769.53153789797	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	133	2157	85.0	-3341	False	NA	NA
PB.4933.1	chr17	-	3582	25	novel_not_in_catalog	TBC1D3	novel	2063	14	NA	NA	-64818	-6	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	71642.22866302775	NA	1	NA	TRUE	NA	NA	NA	A	coding	530	1593	1681	3273	40.0	-16	True	NA	NA
PB.4933.2	chr17	-	1684	12	full-splice_match	AC244154.1	ENST00000649858.1	1643	12	-86	45	-86	-45	multi-exon	FALSE	canonical	1	3025	junction_2	84008.90528119894	NA	0	NA	TRUE	NA	NA	NA	A	coding	434	1305	259	1563	25.0	1	True	AATAAA	-17
PB.10946.1	chr7	+	1938	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	53	1019	0	256	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	159	992	30.0	-6171	False	ATTAAA	-25
PB.1644.10	chr10	+	2051	14	full-splice_match	ADD3	ENST00000277900.12	4337	14	267	2019	0	198	multi-exon	FALSE	canonical	1	298485	junction_13	180363.11254691042	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1953	99	2051	60.0	0	True	NA	NA
PB.1644.11	chr10	+	3651	14	novel_in_catalog	ADD3	novel	697	6	NA	NA	21	0	intron_retention	FALSE	canonical	1	352476	junction_1	166946.99026362482	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	1545	2939	85.0	1	True	NA	NA
PB.1644.12	chr10	+	2937	15	novel_in_catalog	ADD3	novel	697	6	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	1	19941	junction_1	217314.66311695985	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	105	2225	85.0	0	True	NA	NA
PB.1644.13	chr10	+	4065	14	novel_in_catalog	ADD3	novel	697	6	NA	NA	43	-7	combination_of_known_junctions	FALSE	canonical	1	19941	junction_1	233970.69404114413	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	101	2125	40.0	4	True	AATAAA	-10
PB.7088.2	chr2	+	3082	1	novel_in_catalog	MLPH	novel	744	6	NA	NA	-6	-20348	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-6	True	NA	NA
PB.7088.3	chr2	+	2423	16	full-splice_match	MLPH	ENST00000264605.7	3823	16	77	1323	-6	-1	multi-exon	FALSE	canonical	1	101665	junction_9	158618.2784940836	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	218	2020	20.0	-6	True	AAAAAG	-22
PB.10946.8	chr7	+	2903	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	102	5	-11	-3	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	218	943	25.0	0	True	ATTAAA	-9
PB.10946.9	chr7	+	2978	7	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	201929	junction_6	604359.1584487793	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	218	1102	15.0	0	True	ATTAAA	-13
PB.7088.6	chr2	+	2377	15	novel_in_catalog	MLPH	novel	744	6	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	5630	junction_7	163206.74563527436	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	214	1980	25.0	-2	True	AAAAAG	-16
PB.7088.7	chr2	+	3483	15	novel_in_catalog	MLPH	novel	744	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	81928	junction_11	152548.1081366345	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	212	1783	20.0	0	True	AAAAAG	-23
PB.7088.4	chr2	+	2271	15	novel_in_catalog	MLPH	novel	744	6	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	1	76261	junction_10	179061.82273160375	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	218	1864	15.0	-6	True	AAAAAG	-26
PB.7088.5	chr2	+	2064	13	full-splice_match	MLPH	ENST00000409373.5	2031	13	-30	-3	-5	1	multi-exon	FALSE	canonical	1	46155	junction_5	188308.28049524638	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	217	1659	20.0	-5	True	AAAAAG	-24
PB.3062.2	chr13	-	4989	13	novel_in_catalog	MTMR6	novel	5659	14	NA	NA	521	-22	no_combination_of_known_junctions	FALSE	canonical	1	16301	junction_1	63964.57523027015	NA	3	NA	TRUE	NA	NA	NA	C	coding	535	1608	242	1849	40.0	-1	True	AATAAA	-19
PB.6689.3	chr2	+	4917	5	full-splice_match	BCL2L11	ENST00000308659.12	1522	5	0	-3395	0	-2	multi-exon	FALSE	canonical	1	52151	junction_2	24042.555880147185	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	289	705	10.0	-1	True	AATAAA	-13
PB.3062.1	chr13	-	5062	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	575	22	575	-22	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	2	NA	TRUE	NA	NA	NA	C	coding	621	1866	188	2053	40.0	53	True	AATAAA	-19
PB.3062.6	chr13	-	3938	13	novel_not_in_catalog	MTMR6	novel	5659	14	NA	NA	638	-1033	intron_retention	TRUE	canonical	1	4822	junction_3	67145.14111045605	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	125	1348	15.0	-1	True	GATAAA	-13
PB.3062.7	chr13	-	3668	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	555	1436	555	-1436	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	208	2073	30.0	33	True	TATAAA	-20
PB.3062.4	chr13	-	3952	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	640	1067	640	-1067	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	123	1988	20.0	1	True	ATTAAA	-18
PB.3062.5	chr13	-	3938	13	novel_in_catalog	MTMR6	novel	5659	14	NA	NA	522	-1072	no_combination_of_known_junctions	FALSE	canonical	1	16301	junction_1	63964.57523027015	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	241	1848	15.0	0	True	ATTAAA	-13
PB.5470.15	chr18	-	1707	11	full-splice_match	SMAD2	ENST00000402690.6	12075	11	251	10117	-35	-443	multi-exon	FALSE	canonical	1	76274	junction_10	198369.8849760215	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	145	1548	35.0	-19	True	ATTAAA	-24
PB.3062.8	chr13	-	3505	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	577	1577	577	-1577	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	186	2051	50.0	55	True	TATAAA	-16
PB.3062.9	chr13	-	3284	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	533	1842	533	-1842	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	3	NA	TRUE	NA	NA	NA	C	coding	621	1866	230	2095	25.0	11	True	CATAAA	-17
PB.8997.2	chr4	+	1732	3	full-splice_match	SCOC	ENST00000506597.1	1838	3	111	-5	-2	1	multi-exon	FALSE	canonical	1	45758	junction_2	341233.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-13
PB.8997.3	chr4	+	7592	2	novel_in_catalog	SCOC	novel	1964	5	NA	NA	4	-1	intron_retention	FALSE	canonical	1	762402	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	193	582	2	583	15.0	4	True	AATAAA	-16
PB.6910.57	chr2	-	2782	24	novel_not_in_catalog	STAT1	novel	4310	25	NA	NA	11	-2	any annotated donor/acceptor	FALSE	canonical	1	3696	junction_3	491168.49949212535	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	296	2206	35.0	2	True	AATAAA	-15
PB.5470.14	chr18	-	2068	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	-29	-162	combination_of_known_junctions	FALSE	canonical	1	58548	junction_11	208791.22695946702	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	225	1628	15.0	-13	True	TATAAA	-20
PB.10601.2	chr7	+	3096	15	full-splice_match	LIMK1	ENST00000538333.3	2170	15	138	-1064	138	-3	multi-exon	FALSE	canonical	1	52846	junction_1	183674.82420672805	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	34	1875	10.0	0	True	AATAAA	-21
PB.240.10	chr1	-	3844	20	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-11	72	combination_of_known_junctions	FALSE	canonical	1	40640	junction_17	163290.8350300095	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	112	3387	80.0	1	True	NA	NA
PB.9095.2	chr4	+	1811	3	novel_in_catalog	SLC25A4	novel	4440	4	NA	NA	-12	29	intron_retention	FALSE	canonical	1	1280821	junction_1	375570.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	108	794	25.0	0	True	AATAAA	-14
PB.9095.3	chr4	+	1303	4	full-splice_match	SLC25A4	ENST00000281456.10	4440	4	26	3111	-11	30	multi-exon	FALSE	canonical	1	1280821	junction_1	307673.5295373978	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	107	1003	20.0	1	True	AATAAA	-15
PB.5470.16	chr18	-	1847	12	novel_in_catalog	SMAD2	novel	34526	11	NA	NA	-23	-377	combination_of_known_junctions	FALSE	canonical	1	58548	junction_11	208791.22695946702	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	219	1622	35.0	-7	True	ATTAAA	-14
PB.300.1	chr1	-	1616	5	full-splice_match	YRDC	ENST00000373044.2	1826	5	210	0	210	0	multi-exon	FALSE	canonical	1	307196	junction_4	137269.70211412277	NA	2	NA	TRUE	NA	NA	NA	A	coding	127	384	252	635	10.0	9604	False	NA	NA
PB.10476.4	chr7	+	2350	11	novel_not_in_catalog	FKBP9	novel	3621	11	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	5230	junction_4	272237.1590011364	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	164	1876	15.0	-29	True	TATAAA	-16
PB.3045.1	chr13	-	3036	1	novel_in_catalog	EEF1AKMT1	novel	1042	5	NA	NA	-15	-13669	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	27	True	NA	NA
PB.11421.2	chr9	-	1714	16	full-splice_match	CBWD1	ENST00000314367.14	1771	16	26	31	0	0	multi-exon	FALSE	canonical	1	730	junction_14	164690.60706581498	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	259	1338	35.0	NA	False	ATTAAA	-13
PB.430.2	chr1	-	2345	2	full-splice_match	PARS2	ENST00000371279.3	2347	2	0	2	0	-2	multi-exon	FALSE	canonical	1	41348	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	84	1511	30.0	8	True	AATAAA	-14
PB.11144.1	chr8	+	4911	8	novel_in_catalog	UBXN2B	novel	5068	8	NA	NA	-10	-7	no_combination_of_known_junctions	FALSE	canonical	1	5117	junction_6	61824.90601229064	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-19	True	AATAAA	-15
PB.9166.29	chr5	-	3392	8	incomplete-splice_match	ZFR	ENST00000265069.12	4738	20	56	46927	33	5450	3prime_fragment	FALSE	canonical	1	314024	junction_6	142907.88355283628	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	48	1574	15.0	-21	True	NA	NA
PB.2141.1	chr11	+	2123	6	full-splice_match	LRTOMT	ENST00000289488.7	2642	6	513	6	-3	-1	multi-exon	FALSE	canonical	1	57501	junction_1	20898.95926212595	NA	0	NA	TRUE	NA	NA	NA	A	coding	192	579	176	754	35.0	0	True	NA	NA
PB.12300.1	chrX	+	4886	4	novel_not_in_catalog	SLITRK2	novel	8418	5	NA	NA	-28	-2	any annotated donor/acceptor	FALSE	canonical	1	2544	junction_3	3415.3687941421495	NA	2	NA	TRUE	NA	NA	NA	B	coding	845	2538	1472	4009	40.0	-28	True	AATAAA	-14
PB.12300.2	chrX	+	4927	5	novel_not_in_catalog	SLITRK2	novel	8418	5	NA	NA	80	-2	any annotated donor/acceptor	FALSE	canonical	1	7715	junction_4	3199.9558883678383	NA	3	NA	TRUE	NA	NA	NA	B	coding	845	2538	1513	4050	40.0	-10	True	AATAAA	-14
PB.12300.3	chrX	+	3911	5	novel_not_in_catalog	SLITRK2	novel	8418	5	NA	NA	8	-2	any annotated donor/acceptor	FALSE	canonical	1	2315	junction_2	4889.366574516581	NA	1	NA	TRUE	NA	NA	NA	B	coding	845	2538	497	3034	40.0	8	True	AATAAA	-14
PB.12300.4	chrX	+	3784	5	novel_not_in_catalog	SLITRK2	novel	8418	5	NA	NA	145	-2	any annotated donor/acceptor	FALSE	canonical	1	2244	junction_4	5779.256023702359	NA	1	NA	TRUE	NA	NA	NA	B	coding	845	2538	370	2907	40.0	-1	True	AATAAA	-14
PB.7106.4	chr2	-	2446	4	full-splice_match	MTERF4	ENST00000476564.5	614	4	23	-1855	2	18	multi-exon	FALSE	canonical	1	17834	junction_3	68729.27763818463	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-11	True	AATAAA	-16
PB.8243.4	chr3	+	2574	3	full-splice_match	C3orf38	ENST00000318887.7	2633	3	194	-135	-50	135	multi-exon	FALSE	canonical	1	203727	junction_2	6064.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	117	1106	40.0	0	True	TATAAA	-14
PB.11615.3	chr9	+	2140	8	novel_in_catalog	PSAT1	novel	1411	8	NA	NA	-16	-3	no_combination_of_known_junctions	FALSE	canonical	1	910	junction_1	153276.2807402079	NA	13	1	TRUE	NA	NA	NA	C	coding	329	990	147	1136	30.0	0	True	ATTAAA	-14
PB.148.1	chr1	-	1757	1	genic	NBPF2P	novel	NA	NA	NA	NA	3104	1518	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	NA	False	ATTAAA	-16
PB.8475.4	chr3	+	1725	1	full-splice_match	P2RY1	ENST00000305097.5	6747	1	5021	1	5021	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	4203	False	AATAAA	-14
PB.8475.3	chr3	+	2922	1	full-splice_match	P2RY1	ENST00000305097.5	6747	1	438	3387	438	-3387	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	373	1122	653	1774	60.0	0	True	AAAACA	-15
PB.8475.2	chr3	+	1867	1	full-splice_match	P2RY1	ENST00000305097.5	6747	1	438	4442	438	-4442	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	373	1122	653	1774	75.0	0	True	NA	NA
PB.8475.1	chr3	+	6309	1	full-splice_match	P2RY1	ENST00000305097.5	6747	1	438	0	438	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	373	1122	653	1774	15.0	0	True	AATAAA	-15
PB.8090.1	chr3	+	2294	13	novel_in_catalog	ATRIP	novel	711	6	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2774	junction_1	38609.3413231788	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	98	2194	5.0	-2	True	ATTAAA	-33
PB.4745.1	chr17	+	1411	7	full-splice_match	MPDU1	ENST00000250124.10	1601	7	205	-15	0	15	multi-exon	FALSE	canonical	1	495555	junction_2	224696.9478886445	NA	1	1	TRUE	NA	NA	NA	A	coding	247	744	12	755	45.0	0	True	AATAAA	-45
PB.430.1	chr1	-	3967	2	full-splice_match	PARS2	ENST00000371279.3	2347	2	-67	-1553	-67	1553	multi-exon	FALSE	canonical	1	41348	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	151	1578	10.0	-59	False	TTTAAA	-21
PB.10934.1	chr7	+	2541	14	incomplete-splice_match	AGAP3	ENST00000622464.4	3121	19	31018	0	6	0	5prime_fragment	TRUE	canonical	1	178512	junction_7	207404.88930865662	NA	1	NA	TRUE	NA	NA	NA	B	coding	467	1404	645	2048	10.0	1342	False	AATAAA	-19
PB.10934.2	chr7	+	1824	8	incomplete-splice_match	AGAP3	ENST00000463381.5	2730	16	37895	-2	140	0	5prime_fragment	FALSE	canonical	1	84678	junction_3	129960.84047975406	NA	0	NA	TRUE	NA	NA	NA	B	coding	364	1095	237	1331	10.0	7344	False	AATAAA	-19
PB.7938.8	chr3	-	3290	4	full-splice_match	VGLL4	ENST00000424529.6	1025	4	135	-2400	135	0	multi-exon	FALSE	canonical	1	10026	junction_3	126400.73973500138	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	184	804	25.0	8	True	AATAAA	-14
PB.9354.4	chr5	-	3034	9	novel_in_catalog	ELL2	novel	6046	12	NA	NA	-56	-2299	combination_of_known_junctions	FALSE	canonical	1	11128	junction_7	127582.40141252828	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	184	1560	60.0	-1	True	AATAAA	-23
PB.9354.5	chr5	-	3297	10	novel_in_catalog	ELL2	novel	6046	12	NA	NA	-33	-2273	combination_of_known_junctions	FALSE	canonical	1	7719	junction_8	122395.44843207565	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	430	1797	50.0	7926	False	AATAAA	-18
PB.6736.17	chr2	+	7754	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	0	1085	combination_of_known_junctions	FALSE	canonical	1	39395	junction_1	107817.01362272109	NA	6	NA	TRUE	NA	NA	NA	C	coding	1523	4572	412	4983	25.0	0	True	TATAAA	-24
PB.9354.7	chr5	-	3659	13	novel_in_catalog	ELL2	novel	6046	12	NA	NA	-53	-2299	combination_of_known_junctions	FALSE	canonical	1	25262	junction_10	117013.6504728069	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	428	2185	60.0	2	True	AATAAA	-23
PB.7874.3	chr22	+	5250	2	full-splice_match	ZBED4	ENST00000216268.5	6893	2	17	1626	17	-1626	multi-exon	FALSE	canonical	1	57175	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	461	3976	20.0	10	True	ATTAAA	-29
PB.7874.2	chr22	+	6877	2	full-splice_match	ZBED4	ENST00000216268.5	6893	2	17	-1	17	1	multi-exon	FALSE	canonical	1	57175	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	461	3976	25.0	10	True	NA	NA
PB.7874.1	chr22	+	6765	2	full-splice_match	ZBED4	ENST00000216268.5	6893	2	8	120	8	-120	multi-exon	FALSE	canonical	1	57175	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	470	3985	20.0	1	True	AATAAA	-19
PB.9354.3	chr5	-	3301	12	full-splice_match	ELL2	ENST00000237853.8	6046	12	446	2299	49	-2299	multi-exon	FALSE	canonical	1	26720	junction_2	111929.90393430972	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	301	1827	60.0	8182	False	AATAAA	-23
PB.9354.8	chr5	-	3573	13	novel_not_in_catalog	ELL2	novel	6046	12	NA	NA	-2	-2299	any annotated donor/acceptor	FALSE	canonical	1	310	junction_3	118367.06010996635	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	130	1899	60.0	-5	True	AATAAA	-23
PB.9354.9	chr5	-	3539	12	novel_in_catalog	ELL2	novel	6046	12	NA	NA	-55	-2299	no_combination_of_known_junctions	FALSE	canonical	1	748	junction_9	120290.39977659575	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	455	2065	60.0	0	True	AATAAA	-23
PB.6921.34	chr2	-	4231	15	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-17	-3811	intron_retention	FALSE	canonical	1	1186834	junction_5	298369.34210988693	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1908	2323	4230	50.0	-17	True	NA	NA
PB.6569.6	chr2	+	3022	12	novel_in_catalog	TTC31	novel	4025	7	NA	NA	0	-3	intron_retention	FALSE	canonical	1	80883	junction_7	53400.29187944497	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	563	1684	30.0	-5	True	NA	NA
PB.9166.23	chr5	-	3655	20	full-splice_match	ZFR	ENST00000265069.12	4738	20	13	1070	-10	228	multi-exon	FALSE	canonical	1	314024	junction_18	154466.51958428402	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	91	3315	15.0	-9	True	ATTAAA	-20
PB.7037.32	chr2	+	3263	18	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	10	-6	any annotated donor/acceptor	FALSE	canonical	1	400	junction_1	369027.26504718815	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	572	2701	30.0	0	True	AATAAA	-20
PB.5701.4	chr19	-	3249	20	novel_not_in_catalog	TYK2	novel	3971	23	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	170867.16756887003	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	140	2944	15.0	-29	True	AATAAA	-20
PB.11282.40	chr8	-	2027	13	incomplete-splice_match	UBR5	ENST00000220959.8	9418	59	-40	72877	30	19283	3prime_fragment	FALSE	canonical	1	132976	junction_5	94847.13252459922	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1530	496	2025	70.0	164	False	AAGAAA	-21
PB.11088.4	chr8	-	4567	5	full-splice_match	RAB11FIP1	ENST00000287263.8	6253	5	-57	1743	-57	-1412	multi-exon	FALSE	canonical	1	227101	junction_2	52079.762563662865	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	84	2033	85.0	-28	False	NA	NA
PB.7938.2	chr3	-	1869	6	novel_not_in_catalog	VGLL4	novel	3725	6	NA	NA	9	2	any annotated donor/acceptor	FALSE	canonical	1	4351	junction_1	122194.84448273585	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	413	1288	20.0	-1	True	AATAAA	-16
PB.9166.26	chr5	-	2379	13	incomplete-splice_match	ZFR	ENST00000265069.12	4738	20	23	34168	0	18209	3prime_fragment	FALSE	canonical	1	314024	junction_11	152924.5567357752	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2298	81	2378	60.0	1	True	TTTAAA	-33
PB.7938.3	chr3	-	3476	6	novel_in_catalog	VGLL4	novel	3725	6	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	1	34288	junction_5	117367.34921706292	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	118	990	25.0	8	True	AATAAA	-14
PB.3051.1	chr13	+	1980	3	novel_not_in_catalog	MIPEPP3	novel	347	3	NA	NA	-12	26059	intron_retention	FALSE	canonical	1	3449	junction_1	4111.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-99	False	ATTAAA	-17
PB.3051.2	chr13	+	2131	3	novel_not_in_catalog	MIPEPP3	novel	347	3	NA	NA	7	26063	intron_retention	FALSE	canonical	1	11672	junction_2	7050.5	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-9	True	ATTAAA	-21
PB.8984.4	chr4	-	4721	6	full-splice_match	SCLT1	ENST00000506368.5	2096	6	-185	-2440	1	2440	multi-exon	FALSE	canonical	1	16998	junction_1	77299.27213525365	NA	3	NA	TRUE	NA	NA	NA	C	coding	131	396	460	855	35.0	-1	True	AATAAA	-20
PB.8440.10	chr3	-	2317	8	incomplete-splice_match	TFDP2	ENST00000467667.5	865	9	-57	2576	-8	1444	3prime_fragment	FALSE	canonical	1	121676	junction_3	132112.43521627897	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	178	885	90.0	525	False	NA	NA
PB.8790.8	chr4	-	2990	11	full-splice_match	AASDH	ENST00000502617.1	3004	11	11	3	11	-3	multi-exon	FALSE	canonical	1	43096	junction_8	17024.840524656905	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	171	2696	30.0	-20	True	NA	NA
PB.5665.1	chr19	-	2839	1	antisense	novelGene_PNPLA6_AS_novelGene_AC008878.2_AS_novelGene_MCOLN1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	104	315	1800	2114	30.0	-1	True	NA	NA
PB.8790.6	chr4	-	3454	14	full-splice_match	AASDH	ENST00000602986.5	3480	14	17	9	9	-3	multi-exon	FALSE	canonical	1	4798	junction_12	29936.077537502482	NA	5	NA	TRUE	NA	NA	NA	C	coding	945	2838	511	3348	45.0	-22	True	ATTAAA	-19
PB.8790.5	chr4	-	3671	16	novel_not_in_catalog	AASDH	novel	3480	14	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	1776	junction_4	34586.789458404484	NA	2	NA	TRUE	NA	NA	NA	C	coding	1137	3414	152	3565	45.0	-1	True	ATTAAA	-19
PB.8790.4	chr4	-	4496	13	novel_in_catalog	AASDH	novel	3480	14	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	43096	junction_10	24869.785126595998	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	2549	4390	45.0	-8	True	ATTAAA	-19
PB.8790.3	chr4	-	3150	13	novel_in_catalog	AASDH	novel	3480	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1544	junction_12	31689.218307016068	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	206	3043	40.0	11	True	ATTAAA	-20
PB.8790.2	chr4	-	3315	14	full-splice_match	AASDH	ENST00000513376.5	3241	14	-72	-2	5	-1	multi-exon	FALSE	canonical	1	11244	junction_13	30118.092892467314	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	205	3201	30.0	-26	True	ATTAAA	-27
PB.8790.1	chr4	-	3499	15	full-splice_match	AASDH	ENST00000205214.10	3590	15	2	89	2	-86	multi-exon	FALSE	canonical	1	43096	junction_12	23203.97383982286	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3297	180	3476	45.0	-29	True	AATACA	-15
PB.7938.7	chr3	-	3552	6	novel_not_in_catalog	VGLL4	novel	3725	6	NA	NA	38	0	any annotated donor/acceptor	FALSE	canonical	1	12537	junction_1	135153.15145656056	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	154	768	25.0	1189	False	AATAAA	-14
PB.7689.1	chr22	-	2023	10	full-splice_match	NIPSNAP1	ENST00000216121.11	2237	10	211	3	-26	-3	multi-exon	FALSE	canonical	1	407898	junction_9	170296.9143223928	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	45	899	25.0	-34	False	ATTAAA	-11
PB.9255.9	chr5	+	2904	12	novel_not_in_catalog	TRAPPC13	novel	3221	13	NA	NA	-8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	75921.84428772517	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	36	596	30.0	-12	True	AGTAAA	-16
PB.7689.3	chr22	-	2351	9	novel_in_catalog	THOC5	novel	738	6	NA	NA	-25897	-11309	intron_retention	FALSE	canonical	1	407898	junction_8	176634.0915598897	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	32	646	20.0	-21	True	ATTAAA	-10
PB.7689.2	chr22	-	2067	11	novel_in_catalog	THOC5	novel	738	6	NA	NA	-25897	-11308	no_combination_of_known_junctions	FALSE	canonical	1	5478	junction_9	365587.16465538007	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	32	943	25.0	-21	True	ATTAAA	-11
PB.6812.19	chr2	-	2441	10	incomplete-splice_match	IFIH1	ENST00000263642.2	3595	16	-1	10336	-1	-10167	3prime_fragment	FALSE	canonical	1	173522	junction_2	45934.27260153467	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2043	398	2440	50.0	-22	True	NA	NA
PB.7689.4	chr22	-	1397	10	full-splice_match	NIPSNAP1	ENST00000216121.11	2237	10	216	624	-21	-624	multi-exon	FALSE	canonical	1	407898	junction_9	170296.9143223928	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	40	894	80.0	-29	False	NA	NA
PB.6536.10	chr2	+	4070	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	1	1274	1	814	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	28	1545	65.0	1	True	NA	NA
PB.11387.2	chr8	-	3489	11	full-splice_match	PARP10	ENST00000313028.11	3497	11	-10	18	-4	-18	multi-exon	FALSE	canonical	1	214025	junction_8	80895.78333565971	NA	2	NA	TRUE	NA	NA	NA	C	coding	1022	3069	115	3183	30.0	-17	True	AATAAA	-16
PB.4751.1	chr17	+	2816	13	incomplete-splice_match	KDM6B	ENST00000448097.6	5422	23	9328	-726	4375	-390	5prime_fragment	TRUE	canonical	1	154467	junction_12	69170.60099066455	NA	1	NA	TRUE	NA	NA	NA	A	coding	555	1668	264	1931	80.0	-8713	False	NA	NA
PB.9255.5	chr5	+	2726	12	novel_not_in_catalog	TRAPPC13	novel	3221	13	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	75921.84428772517	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	24	584	30.0	0	True	AATAAA	-14
PB.9255.6	chr5	+	4601	2	novel_not_in_catalog	TRAPPC13	novel	3221	13	NA	NA	1	-20825	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	250	753	2278	3030	80.0	-33	True	NA	NA
PB.9255.7	chr5	+	1447	12	novel_not_in_catalog	TRAPPC13	novel	3221	13	NA	NA	14	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	74760.45867030941	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	44	604	25.0	-20	True	ATTAAA	-21
PB.7434.1	chr21	+	3276	7	full-splice_match	FP565260.3	ENST00000623960.3	3274	7	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	187	1095	10.0	NA	False	NA	NA
PB.780.10	chr1	-	4196	10	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	497498.4356924597	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	115	1452	30.0	-1	True	AATAAA	-25
PB.5213.4	chr17	-	5356	40	novel_in_catalog	ABCA5	novel	8220	39	NA	NA	30	1	combination_of_known_junctions	FALSE	canonical	1	6649	junction_2	58003.00210216628	NA	0	NA	TRUE	NA	NA	NA	C	coding	1642	4929	236	5164	20.0	-20	True	AATAAA	-18
PB.780.12	chr1	-	6496	15	full-splice_match	ADAR	ENST00000368471.8	6519	15	-3	26	-3	3	multi-exon	FALSE	canonical	1	262111	junction_14	299132.5171090224	NA	16	NA	TRUE	NA	NA	NA	C	coding	931	2796	988	3783	85.0	-4	True	AATATA	-11
PB.5213.2	chr17	-	5429	39	full-splice_match	ABCA5	ENST00000392676.7	8220	39	-30	2821	-20	13	multi-exon	FALSE	canonical	1	6649	junction_2	56956.413476839785	NA	0	NA	TRUE	NA	NA	NA	C	coding	1642	4929	96	5024	60.0	1	True	AATAAA	-26
PB.5213.3	chr17	-	5254	39	full-splice_match	ABCA5	ENST00000392676.7	8220	39	-66	3032	15	3	multi-exon	FALSE	canonical	1	6649	junction_2	56956.413476839785	NA	2	NA	TRUE	NA	NA	NA	C	coding	1642	4929	132	5060	25.0	14	True	AATAAA	-20
PB.2002.1	chr11	+	2034	4	novel_not_in_catalog	TTC9C	novel	606	3	NA	NA	-53	1	intron_retention	FALSE	non_canonical	0	0	junction_3	207704.30152235387	NA	2	1	TRUE	NA	NA	NA	B	coding	171	516	364	879	40.0	-15	True	ATTAAA	-20
PB.5213.1	chr17	-	5909	39	full-splice_match	ABCA5	ENST00000392676.7	8220	39	-14	2325	-4	315	multi-exon	TRUE	canonical	1	6649	junction_2	56956.413476839785	NA	2	NA	TRUE	NA	NA	NA	C	coding	1642	4929	80	5008	30.0	17	True	AATAAA	-30
PB.999.3	chr1	+	2234	14	full-splice_match	ODR4	ENST00000287859.10	3792	14	-89	1647	-58	180	multi-exon	FALSE	non_canonical	0	0	junction_11	72862.76806874038	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	215	1579	80.0	-7	True	NA	NA
PB.10183.9	chr6	-	3197	8	full-splice_match	GOPC	ENST00000052569.10	4590	8	-14	1407	0	-1404	multi-exon	FALSE	canonical	1	265041	junction_6	34148.87864654309	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	255	1619	40.0	-1	True	ATTAAA	-25
PB.10183.8	chr6	-	4219	8	full-splice_match	GOPC	ENST00000052569.10	4590	8	6	365	6	-362	multi-exon	FALSE	canonical	1	265041	junction_6	34148.87864654309	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	235	1599	30.0	19	False	AATAAA	-15
PB.11442.4	chr9	+	2580	1	novel_in_catalog	RIC1	novel	4127	22	NA	NA	-13	-137421	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	220	663	205	867	100.0	-1	True	NA	NA
PB.532.1	chr1	+	2100	1	incomplete-splice_match	ZNF326	ENST00000370447.3	9433	12	36708	1587	36708	-1587	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1490	False	AATATA	-42
PB.11442.6	chr9	+	6601	25	full-splice_match	RIC1	ENST00000418622.7	6658	25	-12	69	-12	-69	multi-exon	FALSE	canonical	1	18267	junction_13	46228.429038354385	NA	7	1	TRUE	NA	NA	NA	C	coding	1386	4161	204	4364	30.0	0	True	AATAAA	-17
PB.11442.7	chr9	+	3823	22	full-splice_match	RIC1	ENST00000251879.10	4127	22	82	222	-12	-222	multi-exon	FALSE	canonical	1	105231	junction_7	32794.7529247026	NA	0	NA	TRUE	NA	NA	NA	C	coding	1165	3498	204	3701	25.0	0	True	AATAAA	-18
PB.8985.3	chr4	+	1536	6	full-splice_match	C4orf33	ENST00000425929.5	1588	6	26	26	-17	-26	multi-exon	FALSE	canonical	1	56570	junction_1	21342.61218314197	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	67	666	45.0	-2	True	TATAAA	-11
PB.8985.2	chr4	+	3310	2	full-splice_match	C4orf33	ENST00000502360.5	519	2	24	-2815	-19	-747	multi-exon	FALSE	canonical	1	56570	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-4	True	ATTAAA	-44
PB.2381.1	chr11	+	3041	20	novel_not_in_catalog	GLB1L2	novel	3152	20	NA	NA	114	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_19	41880.58762078923	NA	0	NA	TRUE	NA	NA	NA	A	coding	636	1911	75	1985	10.0	-5	True	AGTAAA	-20
PB.10476.1	chr7	+	3629	10	novel_not_in_catalog	FKBP9	novel	3621	11	NA	NA	-36	-33	any annotated donor/acceptor	FALSE	canonical	1	1898	junction_1	287668.37760819035	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	650	2083	35.0	-126	False	AATAAA	-13
PB.11759.26	chr9	-	2810	1	novel_in_catalog	TRAF1	novel	4303	9	NA	NA	28	-23943	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	162	489	297	785	80.0	8	True	NA	NA
PB.893.4	chr1	+	1888	14	full-splice_match	NUF2	ENST00000271452.7	1969	14	77	4	-15	-4	multi-exon	FALSE	canonical	1	159951	junction_1	48401.38949372298	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	203	1597	10.0	-8	True	AATATA	-20
PB.702.15	chr1	-	4181	5	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	0	-31599	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	105	318	1168	1485	35.0	NA	False	NA	NA
PB.7037.35	chr2	+	2973	15	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	10	-5	no_combination_of_known_junctions	FALSE	canonical	1	2569	junction_11	317037.4394899551	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	356	2410	35.0	0	True	AATAAA	-21
PB.11500.2	chr9	-	3683	6	novel_not_in_catalog	B4GALT1	novel	1535	3	NA	NA	871	-6	any annotated donor/acceptor	FALSE	canonical	1	342	junction_5	368023.86296032486	NA	7	NA	TRUE	NA	NA	NA	C	coding	258	777	96	872	10.0	5737	False	AATAAA	-17
PB.338.4	chr1	+	2079	2	novel_not_in_catalog	PPCS	novel	966	3	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	209	630	9	638	20.0	15	True	AATAAA	-33
PB.702.14	chr1	-	3520	5	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	0	-31595	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	B	coding	105	318	503	820	20.0	NA	False	NA	NA
PB.338.1	chr1	+	2272	3	full-splice_match	PPCS	ENST00000372561.3	1431	3	-22	-819	-2	819	multi-exon	FALSE	canonical	1	212708	junction_2	65792.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	30	965	50.0	-6	True	AATAAA	-23
PB.338.2	chr1	+	1445	3	full-splice_match	PPCS	ENST00000372561.3	1431	3	-14	0	1	0	multi-exon	FALSE	canonical	1	212708	junction_2	65792.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	22	957	20.0	2	True	AATAAA	-33
PB.338.3	chr1	+	2182	4	novel_in_catalog	PPCS	novel	966	3	NA	NA	-2	10732	no_combination_of_known_junctions	FALSE	canonical	1	4272	junction_2	156812.41188757986	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	10	735	80.0	14	True	ATTAAA	-44
PB.2886.3	chr12	+	1682	9	full-splice_match	MVK	ENST00000447878.6	1644	9	-9	-29	-9	-1	multi-exon	FALSE	canonical	1	17522	junction_3	99086.25727838094	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	386	994	30.0	-10	True	AATAAA	-20
PB.2886.2	chr12	+	1855	10	full-splice_match	MVK	ENST00000392727.7	1770	10	-81	-4	-37	-1	multi-exon	FALSE	canonical	1	21320	junction_4	92542.27021738583	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	133	1167	30.0	-38	False	AATAAA	-20
PB.2886.1	chr12	+	2202	11	novel_in_catalog	MVK	novel	834	5	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	1	1269	junction_1	89357.12929453363	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	20	1510	25.0	-527	False	AATAAA	-24
PB.2886.5	chr12	+	2071	12	novel_in_catalog	MVK	novel	834	5	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	4546	junction_4	107339.12747790998	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	781	1389	35.0	14	True	AATAAA	-14
PB.2886.4	chr12	+	1966	11	full-splice_match	MVK	ENST00000228510.7	1956	11	-17	7	2	-2	multi-exon	FALSE	canonical	1	101869	junction_1	67314.15253689227	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	94	1284	35.0	1	True	AATAAA	-14
PB.2213.6	chr11	-	6016	3	novel_in_catalog	CTSC	novel	1921	7	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	37472	junction_1	658226.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	117	354	67	420	20.0	-3	True	NA	NA
PB.6880.28	chr2	+	1619	15	incomplete-splice_match	ITGA4	ENST00000233573.6	2070	16	767	28	-46	-28	5prime_fragment	FALSE	canonical	1	236407	junction_4	81354.62031609213	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1179	441	1619	70.0	1	True	NA	NA
PB.8101.3	chr3	+	3797	6	novel_not_in_catalog	WDR6	novel	4401	6	NA	NA	-34	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	478267.34467851766	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	114	2963	5.0	-104	False	AATAAA	-17
PB.9466.14	chr5	+	3536	7	novel_not_in_catalog	SMAD5	novel	7012	8	NA	NA	0	1497	any annotated donor/acceptor	FALSE	canonical	1	3191	junction_2	113231.0813166548	NA	15	NA	TRUE	NA	NA	NA	C	coding	219	660	855	1514	10.0	2	True	AAAAAG	-24
PB.8101.1	chr3	+	4092	6	full-splice_match	WDR6	ENST00000608424.5	4070	6	-22	0	9	0	multi-exon	FALSE	canonical	1	495075	junction_1	370947.45481989766	NA	0	NA	TRUE	NA	NA	NA	C	coding	1121	3366	62	3427	10.0	-28	True	AATAAA	-20
PB.6880.27	chr2	+	6362	27	novel_not_in_catalog	ITGA4	novel	1846	2	NA	NA	-94	2750	any annotated donor/acceptor	FALSE	canonical	1	143	junction_25	137634.73157201058	NA	5	NA	TRUE	NA	NA	NA	C	coding	365	1098	1691	2788	20.0	2	True	NA	NA
PB.8101.7	chr3	+	4043	6	novel_not_in_catalog	WDR6	novel	4401	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	211	junction_1	530156.3357240957	NA	0	NA	TRUE	NA	NA	NA	C	coding	1070	3213	168	3380	10.0	-7	True	AATAAA	-18
PB.8101.6	chr3	+	4287	6	full-splice_match	WDR6	ENST00000452875.5	3916	6	-7	-364	0	0	multi-exon	FALSE	canonical	1	19090	junction_1	523597.97334076837	NA	0	NA	TRUE	NA	NA	NA	C	coding	1095	3288	335	3622	10.0	-9	True	AATAAA	-20
PB.8101.5	chr3	+	4167	5	full-splice_match	WDR6	ENST00000471162.5	3565	5	-14	-588	-1	0	multi-exon	FALSE	canonical	1	495075	junction_1	370955.19401295285	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	44	2629	10.0	-10	True	AATAAA	-20
PB.8101.4	chr3	+	4305	4	novel_in_catalog	WDR6	novel	4401	6	NA	NA	-13	0	intron_retention	FALSE	canonical	1	495075	junction_1	428183.00161210925	NA	3	NA	TRUE	NA	NA	NA	C	coding	891	2676	3	2678	10.0	2	True	AATAAA	-20
PB.11736.6	chr9	+	2038	14	full-splice_match	PRPF4	ENST00000374199.8	3212	14	317	857	18	-728	multi-exon	FALSE	canonical	1	319146	junction_1	52511.986912879824	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	85	1650	65.0	2	True	NA	NA
PB.2169.3	chr11	-	3123	15	full-splice_match	ARRB1	ENST00000360025.7	1895	15	-10	-1218	-10	-199	multi-exon	FALSE	canonical	1	190559	junction_3	86550.2983840752	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	109	1341	20.0	-21	True	AATATA	-13
PB.2169.1	chr11	-	7388	15	full-splice_match	ARRB1	ENST00000360025.7	1895	15	-17	-5476	-17	4059	multi-exon	FALSE	canonical	1	190559	junction_3	86550.2983840752	NA	3	NA	TRUE	NA	NA	NA	C	coding	410	1233	116	1348	10.0	-28	True	AATAAA	-34
PB.2169.4	chr11	-	1999	15	full-splice_match	ARRB1	ENST00000360025.7	1895	15	47	-151	2	151	multi-exon	FALSE	canonical	1	190559	junction_3	86550.2983840752	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	52	1284	25.0	1	True	NA	NA
PB.1528.3	chr10	-	2605	10	novel_not_in_catalog	LIPA	novel	2782	10	NA	NA	182	0	any annotated donor/acceptor	FALSE	canonical	1	18471	junction_9	234510.11837608507	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	153	1352	30.0	-55	True	AATAAA	-23
PB.2034.1	chr11	-	6334	41	novel_not_in_catalog	ATG2A	novel	5654	37	NA	NA	2	3	any annotated donor/acceptor	TRUE	canonical	1	32046	junction_14	47963.683350889296	NA	0	NA	TRUE	NA	NA	NA	C	coding	1930	5793	112	5904	10.0	-1	True	AATAAA	-17
PB.1528.1	chr10	-	2877	10	novel_not_in_catalog	LIPA	novel	2782	10	NA	NA	204	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	239610.86707600218	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	526	1623	25.0	-33	True	AATAAA	-24
PB.2034.3	chr11	-	6327	41	full-splice_match	ATG2A	ENST00000377264.7	6357	41	29	1	-8	-1	multi-exon	FALSE	canonical	1	7472	junction_23	53425.24439288977	NA	1	NA	TRUE	NA	NA	NA	C	coding	1938	5817	85	5901	15.0	26	False	AATAAA	-13
PB.2034.4	chr11	-	2641	1	novel_in_catalog	ATG2A	novel	6357	41	NA	NA	2	-373	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	88	267	83	349	20.0	-1	True	NA	NA
PB.1528.5	chr10	-	2358	8	full-splice_match	LIPA	ENST00000456827.5	2527	8	169	0	169	0	multi-exon	FALSE	canonical	1	1926	junction_7	268112.6038375119	NA	2	NA	TRUE	NA	NA	NA	C	coding	283	852	254	1105	30.0	-68	True	AATAAA	-23
PB.11759.24	chr9	-	3145	1	novel_in_catalog	TRAF1	novel	6324	8	NA	NA	2605	-20627	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	109	330	2099	2428	70.0	-2	True	NA	NA
PB.11674.5	chr9	-	4101	10	novel_not_in_catalog	TSTD2	novel	4320	10	NA	NA	-87	-4	any annotated donor/acceptor	FALSE	canonical	1	2867	junction_8	43608.867334211274	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	847	1719	40.0	-30	True	AATAAA	-18
PB.1528.9	chr10	-	1745	1	genic	LIPA	novel	NA	NA	NA	NA	-1044	-78521	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	112	339	805	1143	25.0	-42	False	NA	NA
PB.1528.8	chr10	-	2754	11	novel_not_in_catalog	LIPA	novel	2782	10	NA	NA	32	-1	any annotated donor/acceptor	FALSE	canonical	1	1850	junction_9	288395.61114663305	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	309	1502	30.0	-33	True	AATAAA	-22
PB.11736.7	chr9	+	2885	14	full-splice_match	PRPF4	ENST00000374199.8	3212	14	326	1	27	-1	multi-exon	FALSE	canonical	1	319146	junction_1	52511.986912879824	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	76	1641	25.0	11	True	TATAAA	-37
PB.11474.3	chr9	+	6571	32	full-splice_match	DENND4C	ENST00000602925.5	6831	32	260	0	-102	0	multi-exon	FALSE	canonical	1	36188	junction_19	42215.237397441844	NA	0	NA	TRUE	NA	NA	NA	C	coding	1909	5730	157	5886	100.0	2	True	NA	NA
PB.2395.1	chr12	+	1783	3	full-splice_match	RHNO1	ENST00000489288.6	1870	3	5	82	-3	-62	multi-exon	FALSE	canonical	1	305596	junction_1	100602.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	148	864	30.0	-3	True	ATTAAA	-29
PB.2395.2	chr12	+	1415	3	full-splice_match	RHNO1	ENST00000489288.6	1870	3	6	449	-2	3	multi-exon	FALSE	canonical	1	305596	junction_1	100602.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	147	863	15.0	-2	True	AATACA	-18
PB.2395.3	chr12	+	1591	2	full-splice_match	RHNO1	ENST00000464682.2	1605	2	33	-19	18	-1	multi-exon	FALSE	canonical	1	36323	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	292	591	15.0	18	True	NA	NA
PB.3213.2	chr13	-	1906	2	full-splice_match	SPRY2	ENST00000377102.5	2708	2	799	3	799	-3	multi-exon	FALSE	canonical	1	21343	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	180	1127	20.0	-1	True	TATAAA	-28
PB.8999.6	chr4	-	4259	21	full-splice_match	TBC1D9	ENST00000442267.2	5306	21	-267	1314	-267	-1314	multi-exon	FALSE	canonical	1	56684	junction_20	54079.22279175247	NA	1	NA	TRUE	NA	NA	NA	C	coding	1266	3801	343	4143	30.0	-14	True	ATTAAA	-21
PB.9320.14	chr5	+	6561	19	full-splice_match	ZFYVE16	ENST00000505560.4	6599	19	43	-5	-7	0	multi-exon	FALSE	canonical	1	31566	junction_1	67991.83138354849	NA	17	NA	TRUE	NA	NA	NA	C	coding	1539	4620	179	4798	30.0	5	True	AATAAA	-44
PB.3213.3	chr13	-	2047	2	full-splice_match	SPRY2	ENST00000377104.3	2111	2	60	4	60	-4	multi-exon	FALSE	canonical	1	338107	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	322	1269	20.0	1071	False	TATAAA	-27
PB.11816.1	chr9	+	2095	1	full-splice_match	PTGES2-AS1	ENST00000443493.3	2100	1	-23	28	-23	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-8917	False	NA	NA
PB.8724.7	chr4	+	1839	12	full-splice_match	RBPJ	ENST00000355476.7	5990	12	207	3944	0	1	multi-exon	FALSE	canonical	1	102696	junction_8	148300.89591393585	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	202	1662	100.0	0	True	NA	NA
PB.6799.16	chr2	+	2668	10	full-splice_match	MARCH7	ENST00000259050.8	5922	10	7	3247	-1	-70	multi-exon	FALSE	canonical	1	144099	junction_1	174545.66581234994	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	116	2230	35.0	0	True	AATAAA	-32
PB.10002.6	chr6	+	4744	21	novel_in_catalog	ABCC10	novel	933	8	NA	NA	19	-1	no_combination_of_known_junctions	FALSE	canonical	1	32588	junction_1	44928.75638285573	NA	0	NA	TRUE	NA	NA	NA	C	coding	1324	3975	437	4411	10.0	0	True	ATTAAA	-19
PB.10002.5	chr6	+	4918	21	incomplete-splice_match	ABCC10	ENST00000372530.8	5033	22	321	4	19	0	5prime_fragment	FALSE	canonical	1	43895	junction_1	43735.664983483446	NA	1	NA	TRUE	NA	NA	NA	C	coding	1492	4479	105	4583	10.0	0	True	ATTAAA	-21
PB.10002.4	chr6	+	3663	21	novel_in_catalog	ABCC10	novel	933	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	3894	junction_1	48389.722154606345	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	182	3328	10.0	-10	True	ATTAAA	-21
PB.10002.3	chr6	+	4894	22	novel_in_catalog	ABCC10	novel	933	8	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	1127	junction_1	54234.62102978961	NA	0	NA	TRUE	NA	NA	NA	C	coding	1324	3975	586	4560	10.0	-30	True	ATTAAA	-20
PB.10002.2	chr6	+	5039	22	full-splice_match	ABCC10	ENST00000372530.8	5033	22	-10	4	-4	0	multi-exon	FALSE	canonical	1	14226	junction_1	49514.096590100344	NA	3	1	TRUE	NA	NA	NA	C	coding	1492	4479	226	4704	10.0	0	True	ATTAAA	-21
PB.10002.1	chr6	+	4980	22	novel_in_catalog	ABCC10	novel	933	8	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	1	13881	junction_1	49551.37879261719	NA	1	NA	TRUE	NA	NA	NA	C	coding	1492	4479	171	4649	10.0	-3	True	ATTAAA	-17
PB.6799.11	chr2	+	3127	10	full-splice_match	MARCH7	ENST00000259050.8	5922	10	-10	2805	0	262	multi-exon	FALSE	canonical	1	144099	junction_1	174545.66581234994	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	133	2247	5.0	-17	True	TATAAA	-6
PB.10847.2	chr7	+	2378	1	novel_in_catalog	MKLN1	novel	2460	19	NA	NA	6	-286818	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	6	True	AATAAA	-21
PB.7894.2	chr22	-	1749	4	incomplete-splice_match	ODF3B	ENST00000329363.8	970	7	43	12	43	5	intron_retention	FALSE	canonical	1	130289	junction_1	39654.9019668439	NA	0	NA	TRUE	NA	NA	NA	B	coding	109	330	715	1044	0.0	9276	False	NA	NA
PB.10847.1	chr7	+	3558	1	novel_in_catalog	MKLN1	novel	2460	19	NA	NA	6	-285638	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	13	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	6	True	NA	NA
PB.893.6	chr1	+	3934	14	full-splice_match	NUF2	ENST00000271452.7	1969	14	10	-1975	0	1975	multi-exon	FALSE	canonical	1	159951	junction_1	48401.38949372298	NA	2	NA	TRUE	NA	NA	NA	C	coding	464	1395	270	1664	75.0	-43	True	NA	NA
PB.8568.1	chr3	-	3274	1	full-splice_match	MAGEF1	ENST00000317897.4	1636	1	-20	-1618	-20	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	307	924	202	1125	100.0	-3	True	NA	NA
PB.8568.2	chr3	-	1621	1	full-splice_match	MAGEF1	ENST00000317897.4	1636	1	13	2	13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	307	924	169	1092	15.0	30	True	AATAAA	-14
PB.6799.19	chr2	+	3734	10	full-splice_match	MARCH7	ENST00000259050.8	5922	10	8	2180	0	264	multi-exon	FALSE	canonical	1	144099	junction_1	174545.66581234994	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	115	2229	25.0	1	True	AATAAA	-17
PB.8034.1	chr3	+	713	6	full-splice_match	RPL14	ENST00000338970.10	7072	6	47	6312	-1	-5	multi-exon	FALSE	canonical	1	5570	junction_2	1841395.6155780754	NA	1	NA	TRUE	NA	NA	NA	A	coding	215	648	23	670	35.0	0	True	AATAAA	-20
PB.9325.1	chr5	+	1423	6	full-splice_match	ZCCHC9	ENST00000380199.9	1372	6	-65	14	-31	-14	multi-exon	FALSE	canonical	1	86205	junction_1	94775.31640675224	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	199	945	35.0	-436	False	AATAAA	-21
PB.10860.3	chr7	+	1988	2	full-splice_match	TMEM140	ENST00000275767.3	1997	2	8	1	8	-1	multi-exon	FALSE	canonical	1	160312	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	216	773	15.0	-7	True	ACTAAA	-19
PB.6425.1	chr2	-	5848	12	novel_in_catalog	ATL2	novel	2868	13	NA	NA	-1	926	intron_retention	TRUE	canonical	1	233787	junction_11	69300.63598076747	NA	6	NA	TRUE	NA	NA	NA	C	coding	552	1659	27	1685	35.0	-15	True	ATTAAA	-24
PB.11759.22	chr9	-	2252	6	incomplete-splice_match	TRAF1	ENST00000373887.7	6324	8	2605	5706	2605	-5706	internal_fragment	FALSE	canonical	1	240522	junction_4	31684.560275313903	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	90	1133	75.0	-2	True	ATTAAA	-15
PB.3841.2	chr15	-	2207	9	full-splice_match	GATM	ENST00000396659.7	2597	9	388	2	79	0	multi-exon	FALSE	canonical	1	317720	junction_8	192413.78862152135	NA	2	1	TRUE	NA	NA	NA	C	coding	294	885	340	1224	20.0	421	False	AATAAA	-19
PB.3841.1	chr15	-	4024	8	full-splice_match	GATM	ENST00000558336.5	1522	8	3	-2505	0	0	multi-exon	FALSE	canonical	1	317720	junction_7	205087.59936651064	NA	2	NA	TRUE	NA	NA	NA	C	coding	391	1176	92	1267	20.0	-1	True	AATAAA	-19
PB.10860.2	chr7	+	5404	1	genic	TMEM140	novel	NA	NA	NA	NA	-19	323	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	86	261	185	445	100.0	6	True	NA	NA
PB.11736.5	chr9	+	2204	14	full-splice_match	PRPF4	ENST00000374199.8	3212	14	316	692	17	-563	multi-exon	FALSE	canonical	1	319146	junction_1	52511.986912879824	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	86	1651	70.0	1	True	NA	NA
PB.10860.1	chr7	+	1674	2	full-splice_match	TMEM140	ENST00000275767.3	1997	2	5	318	5	-318	multi-exon	FALSE	canonical	1	160312	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	219	776	10.0	-10	True	AAAACA	-15
PB.5828.1	chr19	+	988	5	full-splice_match	CCDC124	ENST00000445755.6	938	5	-3	-47	-3	-7	multi-exon	FALSE	canonical	1	444213	junction_1	433548.39328903065	NA	0	NA	TRUE	NA	NA	NA	A	coding	223	672	48	719	30.0	-4	True	AATAAA	-26
PB.10860.6	chr7	+	5302	2	full-splice_match	TMEM140	ENST00000275767.3	1997	2	15	-3320	15	3320	multi-exon	FALSE	canonical	1	160312	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	185	558	209	766	30.0	0	True	AATAAA	-17
PB.11759.23	chr9	-	1952	6	incomplete-splice_match	TRAF1	ENST00000373887.7	6324	8	2604	6007	2604	-6007	internal_fragment	FALSE	canonical	1	240522	junction_4	31684.560275313903	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	91	1134	20.0	-3	True	AATAAA	-14
PB.10860.5	chr7	+	4863	2	full-splice_match	TMEM140	ENST00000275767.3	1997	2	15	-2881	15	2881	multi-exon	FALSE	canonical	1	160312	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	209	766	25.0	0	True	AATAAA	-20
PB.502.11	chr1	-	2150	14	full-splice_match	SSX2IP	ENST00000342203.7	5835	14	55	3630	-22	2	multi-exon	FALSE	canonical	1	45395	junction_13	68828.68871610658	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	210	2054	20.0	-30	True	CATAAA	-21
PB.502.10	chr1	-	2556	14	full-splice_match	SSX2IP	ENST00000342203.7	5835	14	44	3235	-33	397	multi-exon	FALSE	canonical	1	45395	junction_13	68828.68871610658	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	221	2065	45.0	243	False	AATAAA	-22
PB.10860.4	chr7	+	2279	1	novel_in_catalog	TMEM140	novel	1997	2	NA	NA	12	-2771	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	86	261	154	414	45.0	-3	True	NA	NA
PB.10476.10	chr7	+	2585	7	novel_in_catalog	FKBP9	novel	3621	11	NA	NA	0	-962	combination_of_known_junctions	FALSE	canonical	1	4231	junction_6	318161.94754279184	NA	4	NA	TRUE	NA	NA	NA	C	coding	359	1080	150	1229	25.0	-15	True	NA	NA
PB.12196.1	chrX	+	757	3	full-splice_match	BEX3	ENST00000361298.8	921	3	163	1	96	-1	multi-exon	FALSE	canonical	1	2651040	junction_2	219996.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	101	306	203	508	30.0	-1312	False	NA	NA
PB.259.10	chr1	-	1945	9	incomplete-splice_match	BSDC1	ENST00000444377.5	2925	12	-13	10387	0	1130	3prime_fragment	FALSE	canonical	1	165342	junction_8	161408.6626268379	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	28	1299	25.0	-14	True	ATTAAA	-27
PB.2269.1	chr11	-	4388	14	full-splice_match	RDX	ENST00000645495.1	4383	14	2	-7	0	0	multi-exon	FALSE	canonical	1	73453	junction_2	135954.16621100722	NA	3	NA	TRUE	NA	NA	NA	C	coding	572	1719	244	1962	20.0	1	True	AATAAA	-22
PB.2269.7	chr11	-	3134	5	novel_not_in_catalog	RDX	novel	3239	19	NA	NA	-9861	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	186512.2022100699	NA	4	NA	TRUE	NA	NA	NA	C	coding	173	522	195	716	20.0	-3386	False	AATAAA	-14
PB.2269.9	chr11	-	3696	14	full-splice_match	RDX	ENST00000645495.1	4383	14	-28	715	-2	-715	multi-exon	FALSE	canonical	1	73453	junction_2	135954.16621100722	NA	3	NA	TRUE	NA	NA	NA	C	coding	572	1719	274	1992	30.0	0	True	ATTAAA	-34
PB.6161.5	chr19	+	1587	5	incomplete-splice_match	SPIB	ENST00000595883.5	3791	6	840	2324	820	0	5prime_fragment	FALSE	canonical	1	159451	junction_4	28289.724397738482	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	143	934	20.0	-8515	False	NA	NA
PB.6161.4	chr19	+	2508	6	full-splice_match	SPIB	ENST00000595883.5	3791	6	3	1280	0	-1015	multi-exon	FALSE	canonical	1	159451	junction_5	26435.28698841758	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	23	811	40.0	3	True	NA	NA
PB.6161.3	chr19	+	3524	6	full-splice_match	SPIB	ENST00000595883.5	3791	6	0	267	0	-2	multi-exon	FALSE	canonical	1	159451	junction_5	26435.28698841758	NA	2	NA	TRUE	NA	NA	NA	C	coding	262	789	26	814	30.0	0	True	AATAAA	-18
PB.6161.2	chr19	+	3788	6	full-splice_match	SPIB	ENST00000270632.7	1443	6	-20	-2325	0	1	multi-exon	FALSE	canonical	1	12952	junction_5	76104.40008987654	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	26	559	10.0	0	True	NA	NA
PB.6161.1	chr19	+	1467	6	full-splice_match	SPIB	ENST00000595883.5	3791	6	0	2324	0	0	multi-exon	FALSE	canonical	1	159451	junction_5	26435.28698841758	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	26	814	20.0	0	True	NA	NA
PB.4465.1	chr16	+	2135	3	full-splice_match	GINS3	ENST00000318129.5	2274	3	31	108	31	0	multi-exon	FALSE	canonical	1	97930	junction_1	10910.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	178	828	30.0	-57	False	AATAAA	-19
PB.4465.2	chr16	+	2229	3	full-splice_match	GINS3	ENST00000318129.5	2274	3	47	-2	47	2	multi-exon	FALSE	canonical	1	97930	junction_1	10910.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	162	812	0.0	-41	False	AATACA	-21
PB.4465.3	chr16	+	2211	4	full-splice_match	GINS3	ENST00000426538.6	1728	4	72	-555	72	0	multi-exon	FALSE	canonical	1	2609	junction_1	54282.48656385921	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	137	904	30.0	-16	True	AATAAA	-19
PB.4465.4	chr16	+	1857	2	full-splice_match	GINS3	ENST00000328514.11	1932	2	75	0	75	0	multi-exon	FALSE	canonical	1	35163	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	134	550	30.0	-13	True	AATAAA	-19
PB.11561.1	chr9	-	2556	1	intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.3855.1	chr15	-	5051	12	full-splice_match	SHC4	ENST00000332408.8	4558	12	-501	8	-501	-8	multi-exon	FALSE	canonical	1	14112	junction_11	4833.990413965883	NA	2	NA	TRUE	NA	NA	NA	C	coding	630	1893	931	2823	40.0	-27	False	AATAAA	-19
PB.3855.2	chr15	-	3542	11	novel_not_in_catalog	SHC4	novel	4558	12	NA	NA	-12991	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	9949.199115506735	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	191	973	35.0	NA	False	AATAAA	-20
PB.3855.3	chr15	-	3337	12	full-splice_match	SHC4	ENST00000332408.8	4558	12	5	1216	5	216	multi-exon	FALSE	canonical	1	14112	junction_11	4833.990413965883	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	425	2317	70.0	-1	True	NA	NA
PB.3855.4	chr15	-	2818	12	full-splice_match	SHC4	ENST00000332408.8	4558	12	288	1452	288	-20	multi-exon	FALSE	canonical	1	14112	junction_11	4833.990413965883	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	142	2034	85.0	762	False	NA	NA
PB.3855.5	chr15	-	2603	12	full-splice_match	SHC4	ENST00000332408.8	4558	12	279	1676	279	-244	multi-exon	FALSE	canonical	1	14112	junction_11	4833.990413965883	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	151	2043	20.0	753	False	AATAAA	-17
PB.3855.6	chr15	-	2761	12	full-splice_match	SHC4	ENST00000332408.8	4558	12	-3	1800	-3	244	multi-exon	FALSE	canonical	1	14112	junction_11	4833.990413965883	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	433	2325	50.0	-9	True	NA	NA
PB.10474.11	chr7	+	2410	16	full-splice_match	AVL9	ENST00000318709.8	6982	16	19	4553	-13	1	multi-exon	FALSE	canonical	1	148234	junction_6	69687.45190124898	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	203	2149	30.0	-1	True	ATTAAA	-19
PB.2275.7	chr11	-	4136	14	full-splice_match	PPP2R1B	ENST00000341980.10	1953	14	-29	-2154	-11	-1286	multi-exon	FALSE	canonical	1	12699	junction_6	121390.81302619142	NA	2	NA	TRUE	NA	NA	NA	C	coding	556	1671	37	1707	35.0	302	False	NA	NA
PB.5196.12	chr17	-	1849	14	full-splice_match	HELZ	ENST00000417253.7	1872	14	0	23	0	-23	multi-exon	FALSE	canonical	1	136439	junction_13	44691.485079282334	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1677	172	1848	70.0	-10	True	NA	NA
PB.2275.5	chr11	-	4390	13	novel_in_catalog	PPP2R1B	novel	2082	16	NA	NA	-3	-967	combination_of_known_junctions	FALSE	canonical	1	3170	junction_12	130550.9631264475	NA	3	NA	TRUE	NA	NA	NA	C	coding	537	1614	29	1642	25.0	-1	True	AATAAA	-13
PB.2275.4	chr11	-	4445	14	full-splice_match	PPP2R1B	ENST00000341980.10	1953	14	-7	-2485	-7	-955	multi-exon	FALSE	canonical	1	12699	junction_6	121390.81302619142	NA	3	NA	TRUE	NA	NA	NA	C	coding	556	1671	15	1685	5.0	13	True	AATAAA	-25
PB.2275.3	chr11	-	4590	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	42	955	1	-955	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	25	1830	5.0	3	True	AATAAA	-25
PB.5336.1	chr17	+	1813	16	full-splice_match	ASPSCR1	ENST00000306739.8	1843	16	28	2	-24	0	multi-exon	TRUE	canonical	1	132715	junction_7	96835.71243585704	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	70	1731	15.0	-51	False	AATAAA	-17
PB.5336.2	chr17	+	1732	16	novel_in_catalog	ASPSCR1	novel	1001	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	15953	junction_15	120895.75747773598	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1719	14	1732	15.0	5	True	AATAAA	-17
PB.5336.3	chr17	+	2965	15	incomplete-splice_match	ASPSCR1	ENST00000306739.8	1843	16	312	1	-37	1	5prime_fragment	FALSE	canonical	1	132715	junction_6	96377.9228940552	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	1452	2882	10.0	233	False	AATAAA	-18
PB.240.17	chr1	-	3950	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	9	-10	combination_of_known_junctions	FALSE	canonical	1	162341	junction_10	137205.39238239604	NA	0	NA	TRUE	NA	NA	NA	C	coding	1161	3486	114	3599	75.0	-1	True	NA	NA
PB.2823.25	chr12	+	3354	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-5	-195	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	5	2	TRUE	NA	NA	NA	C	coding	454	1365	244	1608	5.0	-7	True	TTTAAA	-19
PB.3225.1	chr13	-	2594	1	genic	DNAJC3-DT	novel	NA	NA	NA	NA	-46	-1543	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-33	False	NA	NA
PB.2275.8	chr11	-	4037	13	novel_in_catalog	PPP2R1B	novel	2082	16	NA	NA	-2	-1295	combination_of_known_junctions	FALSE	canonical	1	1298	junction_3	124990.57046000176	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	28	1617	40.0	0	True	NA	NA
PB.2823.24	chr12	+	2533	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	5	-69	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	246	1694	25.0	-9	True	AATAAA	-15
PB.5538.1	chr18	+	3428	11	novel_in_catalog	CTDP1	novel	5866	13	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	7270	junction_10	62165.02313873935	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	162	2717	10.0	-58	True	AATAAA	-13
PB.5538.2	chr18	+	3599	12	full-splice_match	CTDP1	ENST00000075430.11	3538	12	-57	-4	-12	-3	multi-exon	FALSE	canonical	1	77776	junction_10	44607.117375986556	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	160	2763	0.0	-56	True	AATAAA	-19
PB.5538.3	chr18	+	3748	13	full-splice_match	CTDP1	ENST00000613122.4	5866	13	2	2116	2	-3	multi-exon	FALSE	canonical	1	78773	junction_1	36095.93328538626	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2886	146	3031	0.0	-42	True	AATAAA	-19
PB.8845.1	chr4	-	3572	6	full-splice_match	PAQR3	ENST00000512733.5	9811	6	173	6066	-34	-2	multi-exon	TRUE	canonical	1	91895	junction_5	31564.1243591518	NA	3	NA	TRUE	NA	NA	NA	A	coding	311	936	42	977	25.0	172	False	AATAAA	-13
PB.9060.4	chr4	+	4151	11	novel_in_catalog	PALLD	novel	5809	21	NA	NA	8	-6	no_combination_of_known_junctions	FALSE	canonical	1	15316	junction_4	395366.74717154703	NA	2	NA	TRUE	NA	NA	NA	C	coding	598	1797	329	2125	35.0	-6682	False	AATAAA	-9
PB.7412.14	chr20	+	2280	2	incomplete-splice_match	ARFGAP1	ENST00000395285.3	2697	3	599	-1	599	0	intron_retention	FALSE	canonical	1	640280	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	2	364	25.0	-6826	False	AATAAA	-17
PB.7412.13	chr20	+	2621	5	full-splice_match	ARFGAP1	ENST00000468975.6	2640	5	20	-1	4	0	multi-exon	FALSE	canonical	1	11727	junction_1	261915.21154087252	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	1569	1868	25.0	0	True	AATAAA	-17
PB.2823.21	chr12	+	2346	4	full-splice_match	TMPO	ENST00000266732.8	3615	4	-10	1279	2	-1279	multi-exon	FALSE	canonical	1	325934	junction_3	139532.67883028532	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	249	2333	45.0	-12	True	AATAAA	-20
PB.7412.10	chr20	+	2970	10	incomplete-splice_match	ARFGAP1	ENST00000370283.8	3281	13	3692	4	3159	0	5prime_fragment	FALSE	canonical	1	317381	junction_6	111314.13679612605	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	23	1054	25.0	-7906	False	AATAAA	-17
PB.2823.20	chr12	+	3399	9	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-1	-31	intron_retention	FALSE	non_canonical	0	0	junction_8	291025.63615201926	NA	2	1	TRUE	NA	NA	NA	C	coding	414	1245	252	1496	35.0	-15	True	AATAAA	-18
PB.2702.3	chr12	+	2625	9	novel_in_catalog	MBD6	novel	568	6	NA	NA	757	0	intron_retention	TRUE	canonical	1	6684	junction_1	165130.02507266813	NA	8	1	TRUE	NA	NA	NA	C	coding	567	1704	10	1713	10.0	-4438	False	NA	NA
PB.7798.21	chr22	+	3653	6	full-splice_match	MIEF1	ENST00000325301.6	5625	6	1	1971	1	-17	multi-exon	FALSE	canonical	1	140023	junction_4	63132.397606933955	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	424	1815	85.0	-8	True	NA	NA
PB.7798.20	chr22	+	3793	6	full-splice_match	MIEF1	ENST00000433117.6	3838	6	43	2	-8	-2	multi-exon	FALSE	canonical	1	99354	junction_4	74876.99412609992	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	881	1738	30.0	-17	True	ATTAAA	-18
PB.7798.23	chr22	+	3309	5	novel_in_catalog	MIEF1	novel	573	3	NA	NA	-11	-17	intron_retention	FALSE	canonical	1	140	junction_1	123284.10304860883	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	80	1471	85.0	4	True	NA	NA
PB.7798.22	chr22	+	3140	4	novel_not_in_catalog	MIEF1	novel	573	3	NA	NA	6	-17	intron_retention	FALSE	canonical	0	0	junction_1	129345.81573698728	NA	4	1	TRUE	NA	NA	NA	C	coding	415	1248	55	1302	85.0	-1	True	NA	NA
PB.8550.1	chr3	+	3211	3	novel_in_catalog	LINC00888	novel	1490	4	NA	NA	-43	-3	intron_retention	FALSE	canonical	1	58811	junction_1	36151.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-86	False	AATAAA	-24
PB.8550.2	chr3	+	1637	4	full-splice_match	LINC00888	ENST00000468380.1	1241	4	-10	-386	-10	-2	multi-exon	FALSE	canonical	1	58811	junction_1	30441.807611682107	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-10	False	AATAAA	-25
PB.11836.2	chr9	+	6252	43	novel_in_catalog	AL672142.1	novel	378	5	NA	NA	6205	50074	intron_retention	FALSE	canonical	1	132400	junction_1	126562.45298562101	NA	1	NA	TRUE	NA	NA	NA	B	coding	1172	3519	38	3556	20.0	-288	False	ATTAAA	-16
PB.11516.22	chr9	-	2843	17	full-splice_match	VCP	ENST00000358901.10	4370	17	638	889	16	-83	multi-exon	FALSE	canonical	1	1397368	junction_16	597930.3595088926	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	259	2679	70.0	13	True	NA	NA
PB.10401.15	chr7	+	2302	5	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-9	-617	intron_retention	FALSE	canonical	1	11927	junction_4	106904.30817558289	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	784	2238	65.0	7	True	NA	NA
PB.6662.1	chr2	-	1829	1	genic	RNF149	novel	NA	NA	NA	NA	-107	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1	True	AATAAA	-26
PB.9386.18	chr5	-	4542	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-80	144	0	-144	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	216	833	40.0	453	False	AATAAA	-25
PB.5069.2	chr17	+	2945	22	full-splice_match	KPNB1	ENST00000290158.8	6139	22	368	2826	54	-1	multi-exon	FALSE	canonical	1	781265	junction_1	536402.552896728	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	40	2670	75.0	-859	False	AAAACA	-16
PB.5069.1	chr17	+	3395	22	full-splice_match	KPNB1	ENST00000290158.8	6139	22	329	2415	15	410	multi-exon	FALSE	canonical	1	781265	junction_1	536402.552896728	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	79	2709	100.0	-898	False	CATAAA	-42
PB.5069.7	chr17	+	4036	22	full-splice_match	KPNB1	ENST00000290158.8	6139	22	107	1996	107	829	multi-exon	FALSE	canonical	1	781265	junction_1	536402.552896728	NA	2	NA	TRUE	NA	NA	NA	C	coding	876	2631	301	2931	70.0	-13	True	NA	NA
PB.5069.6	chr17	+	5226	21	novel_in_catalog	KPNB1	novel	3163	21	NA	NA	103	409	intron_retention	FALSE	canonical	1	781265	junction_1	549551.6149470835	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	305	2662	95.0	-17	True	CATAAA	-41
PB.5069.5	chr17	+	3109	21	novel_in_catalog	KPNB1	novel	3163	21	NA	NA	103	17	no_combination_of_known_junctions	FALSE	canonical	1	7003	junction_13	657539.3367730557	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	305	2863	65.0	-17	True	NA	NA
PB.5069.4	chr17	+	4046	22	full-splice_match	KPNB1	ENST00000290158.8	6139	22	226	1867	-88	-873	multi-exon	FALSE	canonical	1	781265	junction_1	536402.552896728	NA	2	NA	TRUE	NA	NA	NA	C	coding	876	2631	182	2812	5.0	-1001	False	ATTAAA	-39
PB.6252.2	chr19	+	2618	5	novel_in_catalog	ZNF211	novel	1750	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	8816	junction_1	31622.316783404724	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	303	2033	15.0	0	True	AATAAA	-18
PB.6252.3	chr19	+	2460	3	full-splice_match	ZNF211	ENST00000347302.7	2472	3	0	12	0	0	multi-exon	FALSE	canonical	1	15060	junction_1	37801.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	180	1874	20.0	0	True	AATAAA	-19
PB.5069.8	chr17	+	4833	22	full-splice_match	KPNB1	ENST00000290158.8	6139	22	149	1157	149	-163	multi-exon	FALSE	canonical	1	781265	junction_1	536402.552896728	NA	4	NA	TRUE	NA	NA	NA	C	coding	876	2631	259	2889	70.0	0	True	NA	NA
PB.6252.6	chr19	+	2642	5	full-splice_match	ZNF211	ENST00000299871.9	2577	5	-36	-29	-1	-1	multi-exon	FALSE	canonical	1	14997	junction_3	11158.884742101247	NA	13	3	TRUE	NA	NA	NA	C	coding	629	1890	168	2057	15.0	12	True	AATAAA	-18
PB.6252.7	chr19	+	3713	3	full-splice_match	ZNF211	ENST00000347302.7	2472	3	19	-1260	1	1260	multi-exon	FALSE	canonical	1	15060	junction_1	37801.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	161	1855	30.0	19	True	NA	NA
PB.6252.4	chr19	+	3650	2	incomplete-splice_match	ZNF211	ENST00000407202.6	1750	3	2774	-540	1	-1	5prime_fragment	FALSE	canonical	1	90662	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	1554	3065	15.0	1	True	AATAAA	-18
PB.6252.5	chr19	+	3769	4	full-splice_match	ZNF211	ENST00000240731.4	2440	4	-58	-1271	2	1260	multi-exon	FALSE	canonical	1	21760	junction_1	28763.199033950772	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	178	1911	30.0	2	True	NA	NA
PB.5853.27	chr19	-	3073	8	incomplete-splice_match	SUGP2	ENST00000452918.6	6176	11	-17	10734	14	-7024	3prime_fragment	FALSE	canonical	1	218750	junction_7	117379.93611467726	NA	0	NA	TRUE	NA	NA	NA	C	coding	994	2982	92	3073	50.0	0	True	NA	NA
PB.5853.26	chr19	-	3478	9	incomplete-splice_match	SUGP2	ENST00000452918.6	6176	11	2	3978	-1	-268	3prime_fragment	FALSE	canonical	1	218750	junction_8	130670.40066877234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	73	3351	15.0	19	True	CATAAA	-21
PB.5853.25	chr19	-	4098	9	novel_in_catalog	SUGP2	novel	747	6	NA	NA	-5	345	intron_retention	FALSE	canonical	1	218750	junction_8	130670.40066877234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	80	3358	65.0	12	True	NA	NA
PB.5853.24	chr19	-	3536	11	full-splice_match	SUGP2	ENST00000452918.6	6176	11	-11	2651	-11	-77	multi-exon	FALSE	canonical	1	218750	junction_10	125232.93275656368	NA	1	NA	TRUE	NA	NA	NA	C	coding	1082	3249	86	3334	0.0	6	True	AAGAAA	-25
PB.1526.1	chr10	+	1915	3	novel_not_in_catalog	IFIT1	novel	1880	2	NA	NA	71	-3	any annotated donor/acceptor	FALSE	canonical	1	23187	junction_1	5369.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	299	1642	35.0	-6	True	AATAAA	-17
PB.5853.22	chr19	-	3755	11	full-splice_match	SUGP2	ENST00000452918.6	6176	11	-24	2445	7	129	multi-exon	FALSE	canonical	1	218750	junction_10	125232.93275656368	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	99	3347	15.0	-7	True	NA	NA
PB.1526.3	chr10	+	1760	3	novel_not_in_catalog	IFIT1	novel	1880	2	NA	NA	91	-143	any annotated donor/acceptor	FALSE	canonical	1	5936	junction_1	13995.0	NA	1	1	TRUE	NA	NA	NA	C	coding	447	1344	284	1627	40.0	14	True	AATAAA	-7
PB.1526.2	chr10	+	1781	2	full-splice_match	IFIT1	ENST00000371804.3	1880	2	96	3	96	-3	multi-exon	FALSE	canonical	1	455254	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	72	1508	35.0	19	True	AATAAA	-17
PB.10621.1	chr7	+	2448	16	full-splice_match	POR	ENST00000461988.5	2522	16	73	1	3	0	multi-exon	FALSE	canonical	1	73039	junction_1	259106.65571948036	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	33	2075	15.0	-5	True	AATAAA	-15
PB.5853.29	chr19	-	4505	5	novel_not_in_catalog	SUGP2	novel	6176	11	NA	NA	1	-13180	intron_retention	FALSE	canonical	1	1787	junction_4	225742.68581119078	NA	5	1	TRUE	NA	NA	NA	C	coding	879	2640	91	2730	95.0	27	True	NA	NA
PB.5853.28	chr19	-	4383	6	novel_not_in_catalog	SUGP2	novel	6176	11	NA	NA	1	-10084	intron_retention	FALSE	non_canonical	0	0	junction_1	212472.4452154679	NA	5	1	TRUE	NA	NA	NA	C	coding	879	2640	65	2704	25.0	27	True	AATAAA	-17
PB.6329.1	chr2	+	2371	3	full-splice_match	KCNS3	ENST00000304101.8	2333	3	-42	4	-31	3	multi-exon	TRUE	canonical	1	32326	junction_1	10235.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	491	1476	423	1898	20.0	-50	False	AATAAA	-19
PB.12166.2	chrX	+	2322	4	full-splice_match	SH3BGRL	ENST00000373212.5	1923	4	77	-476	77	476	multi-exon	FALSE	canonical	1	1485503	junction_1	152337.35748222322	NA	4	NA	TRUE	NA	NA	NA	C	coding	114	345	182	526	35.0	11	True	ATTAAA	-20
PB.12166.3	chrX	+	2089	4	full-splice_match	SH3BGRL	ENST00000373212.5	1923	4	159	-325	-26	325	multi-exon	FALSE	canonical	1	1485503	junction_1	152337.35748222322	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	100	444	25.0	-3	True	ATTAAA	-20
PB.12166.1	chrX	+	1637	4	full-splice_match	SH3BGRL	ENST00000373212.5	1923	4	275	11	90	-11	multi-exon	FALSE	canonical	1	1485503	junction_1	152337.35748222322	NA	0	NA	TRUE	NA	NA	NA	C	coding	66	201	128	328	40.0	-4532	False	AATAAA	-12
PB.85.6	chr1	-	2917	5	full-splice_match	DFFA	ENST00000377036.2	1403	5	-138	-1376	-100	551	multi-exon	FALSE	canonical	1	480567	junction_4	68453.30937717693	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	169	975	75.0	-51	False	NA	NA
PB.6268.1	chr19	+	3194	1	novel_in_catalog	AC020915.5	novel	3042	12	NA	NA	49486	-4663	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	137	414	132	545	10.0	-33	True	NA	NA
PB.5939.2	chr19	-	2373	11	novel_in_catalog	NFKBID	novel	1552	6	NA	NA	7	-21	intron_retention	FALSE	canonical	1	47405	junction_10	22169.428285140777	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1048	1488	100.0	-2	True	NA	NA
PB.6268.3	chr19	+	3113	5	novel_not_in_catalog	AC020915.5	novel	3042	12	NA	NA	49510	-11546	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	37673.49402016622	NA	0	NA	TRUE	NA	NA	NA	B	coding	575	1728	108	1835	20.0	-9	True	ATTAAA	-12
PB.6268.2	chr19	+	2182	4	full-splice_match	ZNF8	ENST00000621650.1	9128	4	4	6942	4	-6942	multi-exon	TRUE	canonical	1	55899	junction_1	18056.506146600517	NA	0	NA	TRUE	NA	NA	NA	A	coding	575	1728	128	1855	45.0	-29	True	NA	NA
PB.257.12	chr1	+	2067	14	full-splice_match	HDAC1	ENST00000373548.7	2124	14	49	8	0	-8	multi-exon	FALSE	canonical	1	717714	junction_4	333113.2877000959	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	36	1484	10.0	-5	True	AATAAA	-18
PB.257.10	chr1	+	5285	12	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	23	-4	intron_retention	FALSE	canonical	1	28502	junction_5	487803.73784342466	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	3982	4698	10.0	5	True	AATAAA	-22
PB.257.11	chr1	+	3859	13	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	-23	-10	intron_retention	FALSE	canonical	1	28502	junction_5	467950.0582209306	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	2562	3278	10.0	8	True	AATAAA	-16
PB.7021.1	chr2	+	2854	9	full-splice_match	RETREG2	ENST00000430297.6	4618	9	8	1756	-2	-77	multi-exon	FALSE	canonical	1	585963	junction_3	158856.8889413027	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	180	1760	25.0	-30	True	AATAAA	-15
PB.9481.8	chr5	+	3299	17	novel_in_catalog	CTNNA1	novel	696	6	NA	NA	1	-120	combination_of_known_junctions	FALSE	canonical	1	7272	junction_16	406154.539774098	NA	1	NA	TRUE	NA	NA	NA	C	coding	861	2586	92	2677	30.0	-3	True	AATAAA	-17
PB.3124.1	chr13	+	2793	4	novel_in_catalog	WBP4	novel	2623	10	NA	NA	236	-15378	intron_retention	FALSE	canonical	1	213864	junction_1	65227.39553285874	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.3124.3	chr13	+	2382	10	full-splice_match	WBP4	ENST00000379487.4	2623	10	244	-3	244	3	multi-exon	FALSE	canonical	1	194755	junction_8	55041.08898331442	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	157	1287	35.0	9	True	ATTAAA	-22
PB.3124.2	chr13	+	1459	10	full-splice_match	WBP4	ENST00000379487.4	2623	10	244	920	244	-920	multi-exon	FALSE	canonical	1	194755	junction_8	55041.08898331442	NA	2	1	TRUE	NA	NA	NA	C	coding	376	1131	157	1287	45.0	9	True	AATAAA	-33
PB.2620.1	chr12	+	1440	4	full-splice_match	ATG101	ENST00000336854.8	1439	4	-1	0	-1	0	multi-exon	FALSE	canonical	1	485599	junction_2	104628.44332631967	NA	0	NA	TRUE	NA	NA	NA	A	coding	218	657	480	1136	10.0	-8	True	AATAAA	-24
PB.3124.4	chr13	+	3031	10	full-splice_match	WBP4	ENST00000379487.4	2623	10	249	-657	249	657	multi-exon	FALSE	canonical	1	194755	junction_8	55041.08898331442	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	152	1282	50.0	14	True	AATAAA	-23
PB.3610.10	chr14	+	3761	16	novel_in_catalog	TDP1	novel	3040	18	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	1	20988	junction_1	72460.7875718232	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	312	2138	30.0	40	True	AATAAA	-20
PB.10667.12	chr7	-	2481	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	55	674	55	587	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	112	1641	5.0	-2	True	NA	NA
PB.2753.10	chr12	+	2056	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	32	4528	-3	-109	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	79	1734	10.0	-3	True	AGTAAA	-5
PB.2753.11	chr12	+	3881	11	full-splice_match	CPSF6	ENST00000266679.8	2229	11	-46	-1606	-2	1606	multi-exon	FALSE	canonical	1	88153	junction_5	351623.03070886864	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	78	1844	20.0	-2	True	ATTAAA	-34
PB.2753.12	chr12	+	3673	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	33	2910	-2	1509	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	78	1733	65.0	-2	True	AATAAA	-19
PB.2753.13	chr12	+	2351	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	33	4232	-2	187	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	78	1733	15.0	-2	True	ATTAAA	-18
PB.2753.14	chr12	+	5176	11	full-splice_match	CPSF6	ENST00000266679.8	2229	11	-44	-2903	0	-1326	multi-exon	FALSE	canonical	1	88153	junction_5	351623.03070886864	NA	3	NA	TRUE	NA	NA	NA	C	coding	588	1767	76	1842	25.0	0	True	AATATA	-21
PB.2753.15	chr12	+	1958	10	novel_not_in_catalog	CPSF6	novel	6616	10	NA	NA	0	5089	any annotated donor/acceptor	FALSE	canonical	1	2768	junction_9	333045.50506014255	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	76	1731	25.0	0	True	NA	NA
PB.2753.16	chr12	+	1953	10	novel_not_in_catalog	CPSF6	novel	6616	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	353541.84408952534	NA	1	1	TRUE	NA	NA	NA	C	coding	196	591	76	666	25.0	0	True	AATAAA	-14
PB.2753.17	chr12	+	3906	10	novel_not_in_catalog	CPSF6	novel	6616	10	NA	NA	2	96	any annotated donor/acceptor	FALSE	canonical	1	2488	junction_9	333108.20905158663	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	74	1729	25.0	2	True	AATAAA	-19
PB.2753.18	chr12	+	5303	10	incomplete-splice_match	CPSF6	ENST00000266679.8	2229	11	-37	3912	7	-3546	3prime_fragment	FALSE	canonical	1	88153	junction_5	361324.13975792215	NA	2	NA	TRUE	NA	NA	NA	C	coding	588	1767	69	1835	85.0	7	True	NA	NA
PB.2753.19	chr12	+	2204	2	novel_not_in_catalog	CPSF6	novel	6616	10	NA	NA	10	-11189	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	10	True	NA	NA
PB.4467.16	chr16	-	8450	49	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	127808	junction_10	284659.0901542109	NA	1	NA	TRUE	NA	NA	NA	C	coding	2383	7152	293	7444	20.0	-20	True	ATTAAA	-13
PB.2630.2	chr12	+	2308	1	novel_in_catalog	MFSD5	novel	2038	2	NA	NA	-1	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	450	1353	742	2094	25.0	0	True	AATAAA	-13
PB.5075.1	chr17	-	1866	3	full-splice_match	SP2-AS1	ENST00000411573.6	1738	3	-45	-83	6	83	multi-exon	FALSE	canonical	1	7041	junction_1	3751.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-13	False	TTTAAA	-28
PB.5075.2	chr17	-	2178	2	novel_not_in_catalog	SP2-AS1	novel	405	4	NA	NA	2	-18009	any annotated donor/acceptor	FALSE	canonical	1	2918	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	4	True	NA	NA
PB.2630.1	chr12	+	1764	2	full-splice_match	MFSD5	ENST00000329548.4	1760	2	-3	-1	-3	0	multi-exon	FALSE	canonical	1	171045	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	195	1547	25.0	-2	True	AATAAA	-16
PB.9332.4	chr5	+	4331	25	full-splice_match	RASA1	ENST00000274376.10	3752	25	-7	-572	-7	370	multi-exon	FALSE	canonical	1	215356	junction_11	59708.90223198099	NA	1	NA	TRUE	NA	NA	NA	C	coding	1046	3141	575	3715	30.0	-2	True	AATATA	-18
PB.745.1	chr1	+	4534	9	full-splice_match	ZNF687	ENST00000336715.10	4831	9	22	275	1	2	multi-exon	FALSE	canonical	1	100091	junction_1	75424.30375952684	NA	0	NA	TRUE	NA	NA	NA	C	coding	1237	3714	125	3838	5.0	-10	True	ATTAAA	-23
PB.11791.10	chr9	-	2400	7	novel_not_in_catalog	MAPKAP1	novel	3252	11	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	1	3604	junction_6	349008.76464097894	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	242	910	20.0	17	True	AATAAA	-15
PB.6418.1	chr2	-	2338	1	incomplete-splice_match	PRKD3	ENST00000379066.5	6111	19	65049	6	19578	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-25
PB.9481.1	chr5	+	3783	18	novel_not_in_catalog	CTNNA1	novel	696	6	NA	NA	-31	0	any annotated donor/acceptor	TRUE	canonical	1	16	junction_17	431514.5041735908	NA	5	2	TRUE	NA	NA	NA	C	coding	873	2622	127	2748	35.0	-90	False	AATAAA	-21
PB.11791.16	chr9	-	2170	11	full-splice_match	MAPKAP1	ENST00000373511.6	3252	11	8	1074	8	2	multi-exon	FALSE	canonical	1	21407	junction_3	270006.1375392974	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	323	1750	20.0	-16	True	AATAAA	-21
PB.8038.22	chr3	+	3489	16	novel_not_in_catalog	CTNNB1	novel	3278	16	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	833775.8538717545	NA	4	1	TRUE	NA	NA	NA	C	coding	781	2346	348	2693	10.0	-4003	False	ATTAAA	-15
PB.6414.21	chr2	-	2485	15	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	77	769	no_combination_of_known_junctions	FALSE	canonical	1	1320	junction_9	137539.43567974257	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	232	1716	35.0	11	True	NA	NA
PB.9481.3	chr5	+	2993	18	full-splice_match	CTNNA1	ENST00000302763.11	3756	18	8	755	0	66	multi-exon	FALSE	canonical	1	840118	junction_11	372950.4219883763	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	83	2803	20.0	6	True	ATTAAA	-19
PB.11791.14	chr9	-	3223	12	full-splice_match	MAPKAP1	ENST00000265960.7	3395	12	12	160	9	-160	multi-exon	FALSE	canonical	1	542994	junction_5	162846.32319033664	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	322	1890	65.0	-15	True	NA	NA
PB.999.11	chr1	+	2703	14	novel_not_in_catalog	ODR4	novel	1900	13	NA	NA	11	-81	intron_retention	FALSE	non_canonical	0	0	junction_10	95940.61235420279	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	146	682	40.0	2	True	AATAAA	-14
PB.521.10	chr1	-	1679	2	full-splice_match	RBMXL1	ENST00000321792.5	4799	2	109	3011	96	884	multi-exon	FALSE	canonical	1	32595	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	320	1492	25.0	335	False	AGTAAA	-15
PB.3116.2	chr13	+	3284	7	full-splice_match	NHLRC3	ENST00000470258.5	3298	7	10	4	3	-4	multi-exon	FALSE	canonical	1	10563	junction_1	58351.42202780209	NA	3	NA	TRUE	NA	NA	NA	C	coding	150	453	653	1105	40.0	-4	True	ATTAAA	-19
PB.3116.3	chr13	+	1675	1	novel_in_catalog	NHLRC3	novel	3237	2	NA	NA	20	-1805	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	88	267	61	327	90.0	13	True	NA	NA
PB.3116.1	chr13	+	1995	5	incomplete-splice_match	NHLRC3	ENST00000379600.7	3549	7	103	4830	30	815	3prime_fragment	FALSE	canonical	1	71770	junction_3	32132.15977315406	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	220	1002	10.0	-35	True	ATTAAA	-12
PB.3116.6	chr13	+	1624	7	full-splice_match	NHLRC3	ENST00000379600.7	3549	7	78	1847	5	-1847	multi-exon	FALSE	canonical	1	71770	junction_3	36989.15357987468	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	245	1288	40.0	-60	True	AATAAA	-24
PB.3116.7	chr13	+	2158	7	full-splice_match	NHLRC3	ENST00000379600.7	3549	7	94	1297	21	-1297	multi-exon	FALSE	canonical	1	71770	junction_3	36989.15357987468	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	229	1272	35.0	-44	True	AATAAA	-45
PB.3116.4	chr13	+	3238	7	full-splice_match	NHLRC3	ENST00000379600.7	3549	7	307	4	234	-4	multi-exon	FALSE	canonical	1	71770	junction_3	36989.15357987468	NA	16	1	TRUE	NA	NA	NA	C	coding	347	1044	16	1059	40.0	12	True	ATTAAA	-19
PB.3116.5	chr13	+	3224	6	full-splice_match	NHLRC3	ENST00000379599.6	3275	6	4	47	4	-47	multi-exon	FALSE	canonical	1	36288	junction_3	51622.62435250653	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	246	1088	30.0	-61	True	ATTAAA	-19
PB.9332.8	chr5	+	4675	25	novel_not_in_catalog	RASA1	novel	3752	25	NA	NA	82	-5	any annotated donor/acceptor	FALSE	canonical	1	1382	junction_12	87283.46979429494	NA	18	2	TRUE	NA	NA	NA	C	coding	1052	3159	486	3644	25.0	2	True	AATAAA	-17
PB.8817.21	chr4	-	6029	25	novel_not_in_catalog	ANKRD17	novel	10784	34	NA	NA	-18	1256	intron_retention	FALSE	canonical	1	3144	junction_1	118233.11830092162	NA	0	NA	TRUE	NA	NA	NA	B	coding	1486	4461	149	4609	40.0	24	True	NA	NA
PB.7031.1	chr2	-	2600	4	full-splice_match	CHPF	ENST00000243776.10	3013	4	405	8	191	-7	multi-exon	FALSE	canonical	1	629359	junction_3	112605.84526371425	NA	1	NA	TRUE	NA	NA	NA	A	coding	613	1842	331	2172	20.0	9369	False	AATAAA	-15
PB.3560.1	chr14	-	7320	35	novel_not_in_catalog	LTBP2	novel	8567	36	NA	NA	-286	653	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	117253.93663690449	NA	4	1	TRUE	NA	NA	NA	A	coding	860	2583	3612	6194	5.0	4283	False	AATAAA	-15
PB.11771.6	chr9	-	3020	4	novel_in_catalog	PDCL	novel	404	3	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	1	9295	junction_1	131049.99560303523	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	729	1280	30.0	-69	False	NA	NA
PB.9864.1	chr6	-	2732	1	full-splice_match	AL662844.4	ENST00000606367.1	2838	1	102	4	102	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-18
PB.9477.1	chr5	+	2142	8	full-splice_match	REEP2	ENST00000378339.6	2170	8	29	-1	29	1	multi-exon	FALSE	canonical	1	100994	junction_1	83694.67794481148	NA	0	NA	TRUE	NA	NA	NA	A	coding	254	765	164	928	5.0	-44	True	AATAAA	-19
PB.9386.11	chr5	-	5558	5	full-splice_match	STARD4	ENST00000502322.5	1467	5	19	-4110	-9	-4	multi-exon	FALSE	canonical	1	238159	junction_4	59671.317159084065	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	197	676	40.0	472	False	AATAAA	-18
PB.8111.18	chr3	-	1407	6	incomplete-splice_match	USP4	ENST00000415188.1	1454	7	-15	7285	2	680	3prime_fragment	FALSE	canonical	1	348930	junction_1	56752.41235542327	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	28	726	90.0	1	True	NA	NA
PB.3570.6	chr14	-	5564	22	novel_not_in_catalog	NEK9	novel	8310	22	NA	NA	13	-1	any annotated donor/acceptor	FALSE	canonical	1	11754	junction_10	103661.3415075401	NA	1	NA	TRUE	NA	NA	NA	C	coding	991	2976	147	3122	25.0	7806	False	AATAAA	-15
PB.3570.7	chr14	-	5336	22	novel_in_catalog	NEK9	novel	8310	22	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	13875	junction_21	99310.04236971165	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	309	2894	25.0	7796	False	AATAAA	-15
PB.3570.4	chr14	-	6030	21	novel_in_catalog	NEK9	novel	8310	22	NA	NA	-5	5	intron_retention	FALSE	canonical	1	183956	junction_4	78398.46955130885	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	2143	3582	20.0	-11	True	AATAAA	-21
PB.3570.5	chr14	-	5514	22	full-splice_match	NEK9	ENST00000238616.9	8310	22	32	2764	-3	4	multi-exon	FALSE	canonical	1	183956	junction_4	77049.51921925515	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	128	3067	20.0	-1	True	AATAAA	-20
PB.3570.2	chr14	-	5664	22	full-splice_match	NEK9	ENST00000238616.9	8310	22	28	2618	1	150	multi-exon	FALSE	canonical	1	183956	junction_4	77049.51921925515	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	132	3071	20.0	-5	True	TATAAA	-44
PB.8111.17	chr3	-	3015	22	full-splice_match	USP4	ENST00000265560.8	3126	22	15	96	-3	-32	multi-exon	FALSE	canonical	1	199546	junction_16	102244.38068821905	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	33	2924	65.0	-4	True	NA	NA
PB.8111.14	chr3	-	2425	17	novel_in_catalog	USP4	novel	3222	21	NA	NA	79	-2	combination_of_known_junctions	FALSE	canonical	1	1308	junction_16	140257.47624675618	NA	2	1	TRUE	NA	NA	NA	C	coding	693	2082	211	2292	90.0	8640	False	NA	NA
PB.3570.1	chr14	-	6247	22	full-splice_match	NEK9	ENST00000238616.9	8310	22	31	2032	-4	736	multi-exon	FALSE	canonical	1	183956	junction_4	77049.51921925515	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	129	3068	45.0	-2	True	AATAAA	-37
PB.11094.1	chr8	-	2934	1	incomplete-splice_match	NSD3	ENST00000317025.12	10776	24	109632	10	7570	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-3427	False	AATAAA	-17
PB.6530.1	chr2	+	5610	6	full-splice_match	MXD1	ENST00000264444.6	5587	6	-30	7	0	0	multi-exon	FALSE	canonical	1	207786	junction_1	65946.01871409676	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	666	291	956	30.0	-3060	False	AATAAA	-14
PB.11904.2	chr9	-	8865	30	novel_not_in_catalog	SEC16A	novel	1988	2	NA	NA	698	0	any annotated donor/acceptor	FALSE	canonical	1	182888	junction_29	113347.6012454813	NA	1	NA	TRUE	NA	NA	NA	B	coding	2337	7014	194	7207	5.0	-22	True	AATAAA	-28
PB.6530.3	chr2	+	3288	6	full-splice_match	MXD1	ENST00000264444.6	5587	6	0	2299	0	-2292	multi-exon	FALSE	canonical	1	207786	junction_1	65946.01871409676	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	261	926	5.0	0	True	TATAAA	-21
PB.6530.2	chr2	+	2774	1	novel_in_catalog	MXD1	novel	860	8	NA	NA	13	1381	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	128	387	531	917	80.0	-3047	False	AAGAAA	-45
PB.6924.10	chr2	+	3685	7	full-splice_match	MOB4	ENST00000448447.6	1021	7	21	-2685	-6	-2	multi-exon	FALSE	canonical	1	122184	junction_1	121255.54965398033	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	20	634	25.0	2	True	AGTAAA	-14
PB.6530.4	chr2	+	2039	2	full-splice_match	MXD1	ENST00000410000.2	598	2	-60	-1381	1	1381	multi-exon	FALSE	canonical	1	207786	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	1	True	AAGAAA	-45
PB.6924.12	chr2	+	2621	8	novel_in_catalog	HSPE1-MOB4	novel	890	9	NA	NA	15668	1882	no_combination_of_known_junctions	FALSE	canonical	1	1178	junction_3	135028.3830067907	NA	4	NA	TRUE	NA	NA	NA	A	coding	126	381	279	659	55.0	15	True	CATAAA	-9
PB.8944.2	chr4	-	1808	1	incomplete-splice_match	NEUROG2	ENST00000313341.3	2287	2	847	2	847	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	148	447	223	669	15.0	854	False	AATAAA	-16
PB.7855.18	chr22	+	4891	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	332	10	-109	-10	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	135	1541	40.0	234	False	AATAAA	-11
PB.7855.19	chr22	+	2021	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	145	3067	0	118	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	322	1728	30.0	47	False	ATTAAA	-31
PB.2488.1	chr12	+	2762	3	antisense	novelGene_EPS8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	55	junction_1	91.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.7855.17	chr22	+	2672	8	novel_not_in_catalog	NUP50	novel	5233	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	2447	junction_3	49421.135578178844	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	1047	1703	35.0	47	False	AATAAA	-13
PB.7855.14	chr22	+	3740	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	141	1352	-4	1039	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	326	1732	15.0	43	False	TTTAAA	-40
PB.7855.15	chr22	+	4204	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	432	597	-9	-597	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	35	1441	90.0	334	False	NA	NA
PB.7855.13	chr22	+	2487	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	352	2394	-89	-3	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	5	NA	TRUE	NA	NA	NA	C	coding	468	1407	115	1521	40.0	254	False	AATAAA	-10
PB.7855.10	chr22	+	4247	9	novel_not_in_catalog	NUP50	novel	5233	8	NA	NA	-18	-597	any annotated donor/acceptor	FALSE	canonical	1	3054	junction_8	48399.953181795536	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	340	1746	90.0	29	False	NA	NA
PB.7855.11	chr22	+	4556	8	novel_in_catalog	NUP50	novel	5233	8	NA	NA	-17	-8	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	38419.14865569735	NA	5	NA	TRUE	NA	NA	NA	C	coding	247	744	461	1204	35.0	30	False	AATAAA	-13
PB.2648.7	chr12	+	3345	11	novel_in_catalog	AC078778.2	novel	567	2	NA	NA	4116	-57998	intron_retention	FALSE	canonical	1	3716	junction_2	498509.68395665096	NA	2	NA	TRUE	NA	NA	NA	B	coding	320	963	62	1024	5.0	-5159	False	AATAAA	-13
PB.2648.6	chr12	+	1890	11	full-splice_match	HNRNPA1	ENST00000340913.10	1842	11	-9	-39	-2	2	multi-exon	FALSE	canonical	1	3716	junction_2	433323.7225002111	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	63	1181	30.0	-5160	False	AATAAA	-26
PB.2648.5	chr12	+	1727	10	full-splice_match	HNRNPA1	ENST00000546500.5	4121	10	553	1841	-2	-5	multi-exon	FALSE	canonical	1	3716	junction_2	493827.14164448826	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	63	1025	40.0	-5160	False	AATAAA	-19
PB.2648.4	chr12	+	1368	10	full-splice_match	HNRNPA1	ENST00000546500.5	4121	10	544	2209	-11	-3	multi-exon	FALSE	canonical	1	3716	junction_2	493827.14164448826	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	72	1034	30.0	-5169	False	AATAAA	-12
PB.2648.3	chr12	+	3598	10	novel_in_catalog	AC078778.2	novel	567	2	NA	NA	4095	-57997	intron_retention	FALSE	canonical	1	3716	junction_2	513337.2348250006	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	83	1045	5.0	-1	True	AATAAA	-14
PB.2648.2	chr12	+	1262	11	full-splice_match	HNRNPA1	ENST00000547566.5	1234	11	-31	3	-31	-2	multi-exon	FALSE	canonical	1	3716	junction_2	487037.5402258947	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	92	1054	5.0	-10	True	AATAAA	-13
PB.2648.1	chr12	+	1571	11	full-splice_match	HNRNPA1	ENST00000340913.10	1842	11	-57	328	-50	5	multi-exon	FALSE	canonical	1	3716	junction_2	433323.7225002111	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	111	1229	25.0	-5208	False	AATAAA	-20
PB.8177.3	chr3	-	3428	21	novel_in_catalog	SFMBT1	novel	4548	21	NA	NA	9	-1040	combination_of_known_junctions	FALSE	canonical	1	9334	junction_20	28845.76910618783	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	304	2904	15.0	8	True	ATTAAA	-20
PB.107.1	chr1	-	2878	9	full-splice_match	CASP9	ENST00000333868.9	2019	9	16	-875	16	-563	multi-exon	FALSE	canonical	1	122123	junction_4	32584.039120979156	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	80	1330	20.0	2199	False	AATAAA	-20
PB.107.2	chr1	-	1964	9	full-splice_match	CASP9	ENST00000333868.9	2019	9	54	1	-24	-1	multi-exon	FALSE	canonical	1	122123	junction_4	32584.039120979156	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	42	1292	5.0	-27	True	AATAAA	-22
PB.2648.8	chr12	+	2232	10	full-splice_match	HNRNPA1	ENST00000546500.5	4121	10	554	1335	-1	501	multi-exon	FALSE	canonical	1	3716	junction_2	493827.14164448826	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	62	1024	15.0	-5159	False	NA	NA
PB.6757.8	chr2	+	3225	14	novel_not_in_catalog	UBXN4	novel	4006	13	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	14477	junction_13	265569.40666854684	NA	3	NA	TRUE	NA	NA	NA	C	coding	508	1527	144	1670	20.0	31	True	NA	NA
PB.6757.9	chr2	+	3336	13	full-splice_match	UBXN4	ENST00000272638.13	4006	13	215	455	-34	-455	multi-exon	FALSE	canonical	1	592836	junction_2	160015.89312998723	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	97	1623	60.0	-34	True	NA	NA
PB.6757.6	chr2	+	3966	14	novel_not_in_catalog	UBXN4	novel	4006	13	NA	NA	-6	1	any annotated donor/acceptor	TRUE	canonical	1	253	junction_2	335538.1071182306	NA	3	NA	TRUE	NA	NA	NA	C	coding	548	1647	151	1797	15.0	24	True	NA	NA
PB.6757.7	chr2	+	4244	12	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	1	-185	intron_retention	FALSE	canonical	1	592836	junction_2	162575.92006884477	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	1068	2261	75.0	31	True	NA	NA
PB.6757.4	chr2	+	3937	13	novel_not_in_catalog	UBXN4	novel	4006	13	NA	NA	-22	5	any annotated donor/acceptor	FALSE	canonical	1	10451	junction_3	276733.3461154438	NA	4	NA	TRUE	NA	NA	NA	C	coding	485	1458	307	1764	10.0	-208	False	NA	NA
PB.6757.5	chr2	+	2100	13	full-splice_match	UBXN4	ENST00000272638.13	4006	13	253	1653	4	-1653	multi-exon	FALSE	canonical	1	592836	junction_2	160015.89312998723	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	59	1585	35.0	4	True	AATAAA	-13
PB.6757.2	chr2	+	4388	12	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	-33	7	intron_retention	FALSE	canonical	1	592836	junction_2	162575.92006884477	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	1020	2213	10.0	-33	True	NA	NA
PB.6757.3	chr2	+	3753	13	full-splice_match	UBXN4	ENST00000272638.13	4006	13	250	3	1	-3	multi-exon	FALSE	canonical	1	592836	junction_2	160015.89312998723	NA	22	NA	TRUE	NA	NA	NA	C	coding	508	1527	62	1588	25.0	1	True	NA	NA
PB.6757.1	chr2	+	3582	13	full-splice_match	UBXN4	ENST00000272638.13	4006	13	239	185	-10	-185	multi-exon	FALSE	canonical	1	592836	junction_2	160015.89312998723	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	73	1599	75.0	-10	True	NA	NA
PB.4650.6	chr17	-	3187	9	novel_not_in_catalog	SCARF1	novel	3443	11	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	canonical	1	15	junction_4	29015.971980693237	NA	3	NA	TRUE	NA	NA	NA	C	coding	744	2235	55	2289	50.0	4325	False	AATAAA	-23
PB.4650.7	chr17	-	3391	11	full-splice_match	SCARF1	ENST00000263071.8	3443	11	-13	65	-13	-58	multi-exon	FALSE	canonical	1	37397	junction_7	18301.419688373906	NA	1	NA	TRUE	NA	NA	NA	C	coding	830	2493	64	2556	65.0	4316	False	NA	NA
PB.4650.4	chr17	-	3890	10	full-splice_match	SCARF1	ENST00000576012.5	3292	10	-68	-530	-42	-2	multi-exon	FALSE	canonical	1	37397	junction_6	16647.88284837845	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	1895	2992	50.0	4287	False	AATAAA	-23
PB.4650.5	chr17	-	3439	11	full-splice_match	SCARF1	ENST00000573852.5	2698	11	-29	-712	3	-28	multi-exon	FALSE	canonical	1	5660	junction_10	26107.054184645192	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	166	2574	75.0	4335	False	AATAAA	-18
PB.4650.2	chr17	-	3448	11	full-splice_match	SCARF1	ENST00000263071.8	3443	11	-7	2	-7	-2	multi-exon	FALSE	canonical	1	37397	junction_7	18301.419688373906	NA	1	NA	TRUE	NA	NA	NA	C	coding	830	2493	58	2550	50.0	4322	False	AATAAA	-23
PB.4650.3	chr17	-	3540	10	novel_in_catalog	SCARF1	novel	3443	11	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	37397	junction_6	14041.419650536378	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	64	1707	50.0	4316	False	AATAAA	-24
PB.4650.1	chr17	-	4938	11	full-splice_match	SCARF1	ENST00000263071.8	3443	11	-13	-1482	-13	1482	multi-exon	FALSE	canonical	1	37397	junction_7	18301.419688373906	NA	5	NA	TRUE	NA	NA	NA	C	coding	830	2493	64	2556	25.0	4316	False	TTTAAA	-5
PB.6634.4	chr2	+	2743	2	full-splice_match	ITPRIPL1	ENST00000536814.1	1947	2	-14	-782	-14	782	multi-exon	FALSE	canonical	1	13241	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	264	1907	80.0	0	True	NA	NA
PB.6634.2	chr2	+	2041	3	full-splice_match	ITPRIPL1	ENST00000439118.2	1946	3	-109	14	-32	-12	multi-exon	FALSE	canonical	1	16815	junction_1	8338.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	361	2028	70.0	-18	True	NA	NA
PB.6634.3	chr2	+	2588	3	full-splice_match	ITPRIPL1	ENST00000439118.2	1946	3	-103	-539	-26	512	multi-exon	FALSE	canonical	1	16815	junction_1	8338.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	355	2022	15.0	-12	True	AATATA	-19
PB.4650.8	chr17	-	3416	11	novel_not_in_catalog	SCARF1	novel	3443	11	NA	NA	1	-31	any annotated donor/acceptor	FALSE	canonical	1	273	junction_7	26113.909669178225	NA	2	NA	TRUE	NA	NA	NA	C	coding	835	2508	47	2554	65.0	4333	False	AATAAA	-15
PB.6634.1	chr2	+	2870	3	full-splice_match	ITPRIPL1	ENST00000439118.2	1946	3	-115	-809	-38	782	multi-exon	FALSE	canonical	1	16815	junction_1	8338.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	367	2034	80.0	-922	False	NA	NA
PB.9925.1	chr6	-	2658	2	full-splice_match	ZBTB22	ENST00000431845.2	2651	2	-8	1	-8	-1	multi-exon	FALSE	canonical	1	40343	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	634	1905	161	2065	20.0	0	True	ATTAAA	-18
PB.11607.17	chr9	-	2355	8	full-splice_match	CARNMT1	ENST00000376834.7	4130	8	-25	1800	4	-1800	multi-exon	FALSE	canonical	1	91040	junction_5	23891.298567999736	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	179	1408	70.0	-5	True	AATAAA	-27
PB.11234.1	chr8	+	1910	8	novel_not_in_catalog	FAM92A	novel	608	6	NA	NA	-2	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	41142.03736187252	NA	1	1	TRUE	NA	NA	NA	A	coding	144	435	89	523	20.0	-1	True	AATAAA	-21
PB.10384.10	chr7	+	2608	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	427978.75701095257	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	122	1603	5.0	0	True	AATAAA	-20
PB.10384.11	chr7	+	1759	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	427978.75701095257	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	122	1603	5.0	0	True	AATAAA	-21
PB.10384.12	chr7	+	2736	5	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	475865.750983602	NA	5	1	TRUE	NA	NA	NA	C	coding	478	1437	121	1557	5.0	1	True	AATAAA	-20
PB.10384.13	chr7	+	1805	6	novel_not_in_catalog	FSCN1	novel	2777	5	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	427978.75701095257	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	120	1601	5.0	2	True	AATAAA	-19
PB.4341.1	chr16	+	3327	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	37	1205	-14	194	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	3	NA	TRUE	NA	NA	NA	C	coding	419	1260	39	1298	60.0	-33	False	NA	NA
PB.4341.3	chr16	+	3783	7	novel_in_catalog	NFATC2IP	novel	2350	5	NA	NA	0	-654	no_combination_of_known_junctions	FALSE	canonical	1	6446	junction_3	158824.75869903143	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	25	1203	95.0	-19	True	NA	NA
PB.4341.2	chr16	+	4010	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	49	510	-2	-510	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	27	1286	100.0	-21	True	NA	NA
PB.4341.5	chr16	+	2349	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	52	2168	1	650	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	24	1283	5.0	-18	True	NA	NA
PB.4341.4	chr16	+	3110	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	52	1407	1	-8	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	24	1283	60.0	-18	True	NA	NA
PB.4341.7	chr16	+	3862	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	54	653	3	-653	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	22	1281	100.0	-16	True	NA	NA
PB.4341.6	chr16	+	2092	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	52	2425	1	393	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	24	1283	25.0	-18	True	NA	NA
PB.4341.9	chr16	+	2834	8	full-splice_match	NFATC2IP	ENST00000320805.8	4569	8	65	1670	-5	-271	multi-exon	FALSE	canonical	1	215668	junction_5	93954.20774689624	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	11	1270	70.0	-5	True	NA	NA
PB.4341.8	chr16	+	3445	5	novel_in_catalog	NFATC2IP	novel	2350	5	NA	NA	7	-653	no_combination_of_known_junctions	FALSE	canonical	1	1282	junction_3	167973.63718601796	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	18	740	100.0	-12	True	NA	NA
PB.504.11	chr1	-	2815	14	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	27173	-1	any annotated donor/acceptor	FALSE	canonical	1	288	junction_13	30210.1310194613	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	98	1714	25.0	NA	False	AATAAA	-18
PB.504.10	chr1	-	2833	14	full-splice_match	MCOLN2	ENST00000284027.5	1729	14	-3	-1101	-2	-1	multi-exon	FALSE	canonical	1	2351	junction_13	29781.660544187773	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	116	1732	25.0	-7	True	AATAAA	-18
PB.504.17	chr1	-	2700	14	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	30638.205872743132	NA	20	2	TRUE	NA	NA	NA	C	coding	490	1473	242	1714	80.0	-5	True	NA	NA
PB.8510.13	chr3	+	2739	9	novel_not_in_catalog	MYNN	novel	4999	8	NA	NA	-13	1	any annotated donor/acceptor	FALSE	canonical	1	12264	junction_3	89142.66335758864	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	382	1872	45.0	-13	True	AATAAA	-12
PB.504.15	chr1	-	2819	15	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	5312	junction_13	32927.065745324755	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	426	2042	80.0	-6	True	NA	NA
PB.504.14	chr1	-	2912	15	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	16	-2	no_combination_of_known_junctions	FALSE	canonical	1	288	junction_14	35211.765039094076	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	196	1812	25.0	12	True	AATAAA	-17
PB.8510.12	chr3	+	4498	9	full-splice_match	MYNN	ENST00000356716.8	2833	9	-35	-1630	-13	-7	multi-exon	FALSE	canonical	1	52573	junction_2	72394.77100322492	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	170	2002	25.0	-13	True	TATAAA	-18
PB.8510.15	chr3	+	2418	8	full-splice_match	MYNN	ENST00000349841.9	4999	8	565	2016	-9	-337	multi-exon	FALSE	canonical	1	152230	junction_2	34926.75055318032	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	99	1931	45.0	-9	True	AATAAA	-21
PB.8510.14	chr3	+	1547	6	novel_in_catalog	MYNN	novel	4999	8	NA	NA	-9	-5	no_combination_of_known_junctions	FALSE	canonical	1	28096	junction_5	78722.35530622798	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1449	99	1547	65.0	-9	True	NA	NA
PB.6630.2	chr2	-	3784	6	novel_in_catalog	STARD7	novel	3368	8	NA	NA	-2	1	intron_retention	FALSE	canonical	1	783379	junction_5	358051.5460358187	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	1474	1920	35.0	-1	True	AATAAA	-19
PB.11607.15	chr9	-	3011	8	full-splice_match	CARNMT1	ENST00000376834.7	4130	8	214	905	214	-905	multi-exon	FALSE	canonical	1	91040	junction_5	23891.298567999736	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	177	1169	75.0	294	False	NA	NA
PB.8510.17	chr3	+	2715	7	novel_in_catalog	MYNN	novel	4999	8	NA	NA	-8	3	no_combination_of_known_junctions	FALSE	canonical	1	28096	junction_5	75046.19010020133	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	98	1846	50.0	-8	True	AATAAA	-14
PB.8510.16	chr3	+	1966	8	full-splice_match	MYNN	ENST00000602751.5	2630	8	-9	673	-9	-673	multi-exon	FALSE	canonical	1	13179	junction_2	74406.04355391394	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	802	1815	15.0	-9	True	AGTAAA	-26
PB.284.1	chr1	+	3969	18	novel_not_in_catalog	AGO4	novel	7116	18	NA	NA	-532	165	intron_retention	FALSE	canonical	1	8216	junction_1	40769.07236745058	NA	1	NA	TRUE	NA	NA	NA	A	coding	794	2385	267	2651	30.0	4	True	ATTAAA	-14
PB.3508.6	chr14	-	1398	9	full-splice_match	ATP6V1D	ENST00000216442.11	1845	9	445	2	-1	-2	multi-exon	FALSE	canonical	1	748612	junction_8	102240.3889333094	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	107	850	25.0	-1	True	AGTAAA	-14
PB.3508.5	chr14	-	1600	9	full-splice_match	ATP6V1D	ENST00000216442.11	1845	9	442	-197	-4	197	multi-exon	FALSE	canonical	1	748612	junction_8	102240.3889333094	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	110	853	35.0	-4	True	AATAAA	-16
PB.3508.4	chr14	-	1914	9	full-splice_match	ATP6V1D	ENST00000216442.11	1845	9	443	-512	-3	512	multi-exon	FALSE	canonical	1	748612	junction_8	102240.3889333094	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	109	852	30.0	-3	True	NA	NA
PB.3508.3	chr14	-	2657	9	full-splice_match	ATP6V1D	ENST00000216442.11	1845	9	451	-1263	-4	-130	multi-exon	FALSE	canonical	1	748612	junction_8	102240.3889333094	NA	2	NA	TRUE	NA	NA	NA	C	coding	247	744	101	844	50.0	5	True	AATAAA	-35
PB.3508.2	chr14	-	3325	9	full-splice_match	ATP6V1D	ENST00000216442.11	1845	9	395	-1875	-22	-8	multi-exon	FALSE	canonical	1	748612	junction_8	102240.3889333094	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	157	900	55.0	-12	False	AAAAAG	-19
PB.3508.1	chr14	-	5093	9	full-splice_match	ATP6V1D	ENST00000216442.11	1845	9	443	-3691	-3	1808	multi-exon	FALSE	canonical	1	748612	junction_8	102240.3889333094	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	109	852	20.0	-3	True	AATAAA	-15
PB.6630.6	chr2	-	4097	6	novel_in_catalog	STARD7	novel	3368	8	NA	NA	-40	0	intron_retention	FALSE	canonical	1	783379	junction_5	297800.9981834178	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	432	1172	40.0	-17	False	AATAAA	-18
PB.5967.1	chr19	+	2241	1	antisense	novelGene_ZFP30_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	AATAAA	-34
PB.18.19	chr1	-	3955	10	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	1	20	intron_retention	FALSE	canonical	1	4383	junction_8	467904.97358592425	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	2516	3412	30.0	-14	True	AATAAA	-40
PB.11607.14	chr9	-	4130	9	novel_not_in_catalog	CARNMT1	novel	4130	8	NA	NA	568	-6	any annotated donor/acceptor	FALSE	canonical	1	2134	junction_8	59549.83835082489	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	397	1389	30.0	648	False	ATTAAA	-15
PB.6630.4	chr2	-	2977	8	novel_in_catalog	STARD7	novel	3368	8	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	1	16279	junction_7	535228.3257849602	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	304	1113	35.0	-2	True	AATAAA	-19
PB.7930.1	chr3	-	3366	3	novel_in_catalog	EMC3	novel	570	4	NA	NA	-74	-29396	no_combination_of_known_junctions	FALSE	canonical	1	3966	junction_2	6005.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	2091	2447	35.0	12	True	AAGAAA	-4
PB.5715.2	chr19	-	2036	10	full-splice_match	YIPF2	ENST00000253031.6	2087	10	19	32	-5	-32	multi-exon	TRUE	canonical	1	150806	junction_9	161720.21034498035	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	109	1059	85.0	-28	True	NA	NA
PB.11449.1	chr9	+	2748	1	intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	202	609	319	927	80.0	NA	False	NA	NA
PB.11954.25	chrX	-	2971	2	full-splice_match	BX890604.2	ENST00000381106.4	1099	2	-25	-1847	-25	1847	multi-exon	FALSE	canonical	1	689	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	437	844	25.0	NA	False	NA	NA
PB.11954.24	chrX	-	3980	2	full-splice_match	BX890604.2	ENST00000381106.4	1099	2	-10	-2871	-10	2871	multi-exon	FALSE	canonical	1	689	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	422	829	20.0	NA	False	NA	NA
PB.11954.23	chrX	-	4060	5	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	8	-3774	any annotated donor/acceptor	FALSE	canonical	1	41	junction_3	614.6541202172161	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	404	811	30.0	NA	False	AATAAA	-34
PB.11954.22	chrX	-	2034	3	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-24	512	any annotated donor/acceptor	FALSE	canonical	1	158	junction_1	265.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	436	843	75.0	NA	False	NA	NA
PB.11954.21	chrX	-	2372	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	124	518	any annotated donor/acceptor	FALSE	canonical	1	41	junction_4	603.6474467766761	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	288	695	75.0	NA	False	NA	NA
PB.11954.20	chrX	-	2363	5	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	7	521	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	233.92039244153128	NA	4	NA	TRUE	NA	NA	NA	C	coding	135	408	405	812	75.0	NA	False	NA	NA
PB.4355.2	chr16	+	4672	19	full-splice_match	TAOK2	ENST00000279394.7	4246	19	-427	1	213	-1	multi-exon	FALSE	canonical	1	167006	junction_1	102837.90126045124	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	831	3980	20.0	-18	True	AATAAA	-20
PB.4355.3	chr16	+	3083	17	novel_not_in_catalog	TAOK2	novel	5169	16	NA	NA	231	-1	any annotated donor/acceptor	FALSE	canonical	1	20425	junction_16	121413.51634340838	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2271	813	3083	5.0	0	True	AATAAA	-19
PB.4355.1	chr16	+	4897	16	full-splice_match	TAOK2	ENST00000308893.8	5169	16	224	48	224	-48	multi-exon	FALSE	canonical	1	167006	junction_1	83996.22964490727	NA	0	NA	TRUE	NA	NA	NA	C	coding	1235	3708	820	4527	80.0	-7	True	NA	NA
PB.5977.3	chr19	+	3195	21	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	-18	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	950730.3632108778	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	116	2782	90.0	-56	False	NA	NA
PB.5603.1	chr19	+	3027	14	novel_not_in_catalog	TLE6	novel	2100	17	NA	NA	0	-1	intron_retention	TRUE	non_canonical	0	0	junction_7	14859.218293964603	NA	2	1	TRUE	NA	NA	NA	B	coding	348	1047	1807	2853	15.0	-1	True	AATAAA	-16
PB.5977.1	chr19	+	3457	21	full-splice_match	ACTN4	ENST00000252699.6	4963	21	13	1493	13	-54	multi-exon	FALSE	canonical	1	868051	junction_19	763394.3844089289	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	64	2799	90.0	-4	True	NA	NA
PB.6802.18	chr2	-	6207	35	novel_not_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-65	-31514	any annotated donor/acceptor	FALSE	canonical	1	1451	junction_1	42954.03753419176	NA	1	NA	TRUE	NA	NA	NA	B	coding	1669	5010	94	5103	45.0	-20	False	AATAAA	-20
PB.5977.7	chr19	+	3923	21	full-splice_match	ACTN4	ENST00000252699.6	4963	21	-20	1060	1	379	multi-exon	FALSE	canonical	1	868051	junction_19	763394.3844089289	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	97	2832	35.0	1	True	AATAAA	-16
PB.1453.1	chr10	-	2515	3	full-splice_match	PRF1	ENST00000373209.2	2492	3	-21	-2	-5	2	multi-exon	FALSE	canonical	1	101908	junction_2	13919.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	555	1668	141	1808	15.0	-5	True	AATAAA	-19
PB.5977.5	chr19	+	2097	11	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	-10	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	717421.2559978691	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	108	1439	90.0	-10	True	NA	NA
PB.5977.4	chr19	+	3506	21	novel_in_catalog	ACTN4	novel	1729	12	NA	NA	-15	-54	combination_of_known_junctions	FALSE	canonical	1	198502	junction_7	1004564.4933765813	NA	14	1	TRUE	NA	NA	NA	C	coding	911	2736	113	2848	90.0	-15	True	NA	NA
PB.6920.11	chr2	-	4727	28	novel_not_in_catalog	ANKRD44	novel	2798	22	NA	NA	-18162	-1693	any annotated donor/acceptor	FALSE	canonical	1	1420	junction_27	44635.29503884106	NA	4	NA	TRUE	NA	NA	NA	C	coding	1060	3183	46	3228	25.0	355	False	AATGAA	-35
PB.5977.9	chr19	+	3438	22	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	1	379	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	928156.6075520281	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	97	2832	35.0	1	True	AATAAA	-16
PB.5977.8	chr19	+	3657	21	full-splice_match	ACTN4	ENST00000252699.6	4963	21	-20	1326	1	113	multi-exon	FALSE	canonical	1	868051	junction_19	763394.3844089289	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	97	2832	5.0	1	True	TATAAA	-22
PB.6920.14	chr2	-	3687	28	full-splice_match	ANKRD44	ENST00000647377.1	7218	28	-173	3704	-22	-2891	multi-exon	FALSE	canonical	1	50026	junction_1	39916.89022987816	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	216	3386	25.0	6	False	AATAAA	-39
PB.5603.3	chr19	+	3131	13	novel_not_in_catalog	TLE6	novel	2100	17	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	15184.472416108356	NA	2	1	TRUE	NA	NA	NA	B	coding	348	1047	1912	2958	15.0	1	True	AATAAA	-15
PB.6920.16	chr2	-	2985	26	incomplete-splice_match	ANKRD44	ENST00000282272.14	5147	28	-114	7913	0	-875	3prime_fragment	FALSE	canonical	1	101245	junction_6	34355.70787045437	NA	1	NA	TRUE	NA	NA	NA	C	coding	936	2808	177	2984	55.0	-1	True	NA	NA
PB.6920.17	chr2	-	1677	10	full-splice_match	ANKRD44	ENST00000409919.5	1622	10	-43	-12	-33	12	multi-exon	FALSE	canonical	1	126448	junction_3	29230.17407271102	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	227	1330	20.0	-5	True	AATAAA	-32
PB.11050.46	chr8	+	1615	7	incomplete-splice_match	PTK2B	ENST00000517339.5	3914	29	53249	0	-2156	0	5prime_fragment	FALSE	canonical	1	472607	junction_2	174606.56602933223	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	118	738	0.0	-8489	False	ATTAAA	-15
PB.11050.44	chr8	+	2256	13	incomplete-splice_match	PTK2B	ENST00000517339.5	3914	29	40311	0	308	0	5prime_fragment	FALSE	canonical	1	472607	junction_8	138418.35101865008	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	84	1379	0.0	-6509	False	ATTAAA	-15
PB.5603.2	chr19	+	2201	14	novel_not_in_catalog	TLE6	novel	2100	17	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	14720.490714100033	NA	6	1	TRUE	NA	NA	NA	B	coding	353	1062	966	2027	15.0	0	True	AATAAA	-16
PB.11050.42	chr8	+	2503	15	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-1206	-1	no_combination_of_known_junctions	FALSE	canonical	1	20250	junction_10	216726.61828527765	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	173	1627	0.0	-8023	False	ATTAAA	-14
PB.6745.2	chr2	+	3520	18	full-splice_match	AC073869.1	ENST00000438378.2	3785	18	264	1	264	-1	multi-exon	FALSE	canonical	1	12490	junction_10	51262.44361131705	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	1460	2374	10.0	-15	True	AATAAA	-17
PB.6745.1	chr2	+	3867	17	novel_in_catalog	AC073869.1	novel	2762	19	NA	NA	258	-1	intron_retention	TRUE	canonical	1	12490	junction_10	52824.49518201168	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	2143	2721	10.0	-21	True	AATAAA	-17
PB.11669.6	chr9	-	2959	5	novel_in_catalog	ZNF510	novel	5154	6	NA	NA	-8	-2154	no_combination_of_known_junctions	FALSE	canonical	1	3473	junction_3	40274.62238804977	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	335	2200	20.0	22	True	NA	NA
PB.11669.5	chr9	-	3061	6	full-splice_match	ZNF510	ENST00000223428.8	5154	6	-60	2153	23	-2153	multi-exon	FALSE	canonical	1	38194	junction_5	23679.553419775468	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	763	2301	20.0	-20	False	NA	NA
PB.11669.4	chr9	-	3519	6	novel_not_in_catalog	ZNF510	novel	5154	6	NA	NA	-31	-2153	any annotated donor/acceptor	FALSE	canonical	1	1068	junction_3	45641.74380805361	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	894	2759	20.0	-1	True	NA	NA
PB.11669.3	chr9	-	5206	6	full-splice_match	ZNF510	ENST00000223428.8	5154	6	-52	0	31	0	multi-exon	FALSE	canonical	1	38194	junction_5	23679.553419775468	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	755	2293	20.0	-12	True	AATAAA	-15
PB.8726.1	chr4	-	2114	1	antisense	novelGene_LINC02506_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-15
PB.11669.1	chr9	-	6522	6	full-splice_match	ZNF510	ENST00000223428.8	5154	6	-59	-1309	24	1309	multi-exon	FALSE	canonical	1	38194	junction_5	23679.553419775468	NA	6	NA	TRUE	NA	NA	NA	C	coding	512	1539	762	2300	35.0	-19	True	AATAAA	-17
PB.415.6	chr1	+	2344	16	full-splice_match	SCP2	ENST00000371514.7	2811	16	58	409	1	34	multi-exon	FALSE	canonical	1	256332	junction_1	484259.8808887641	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	111	1754	60.0	1	True	AATAAA	-38
PB.723.4	chr1	+	5012	12	novel_not_in_catalog	RPRD2	novel	4780	11	NA	NA	-480	-1	any annotated donor/acceptor	FALSE	canonical	1	52093	junction_11	64715.563092761724	NA	1	NA	TRUE	NA	NA	NA	C	coding	960	2883	546	3428	95.0	23	True	NA	NA
PB.7872.5	chr22	+	1896	11	incomplete-splice_match	TBC1D22A	ENST00000337137.8	3787	13	31	138063	1	-136453	3prime_fragment	FALSE	canonical	1	235499	junction_4	56787.06358397131	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	136	1641	85.0	-8	True	NA	NA
PB.2715.4	chr12	-	5169	18	novel_in_catalog	LRIG3	novel	3667	19	NA	NA	3	-7	intron_retention	FALSE	canonical	1	91173	junction_17	31120.402875190848	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	198	1727	30.0	1	True	AATAAA	-14
PB.2715.5	chr12	-	3549	19	full-splice_match	LRIG3	ENST00000379141.8	3667	19	25	93	25	-93	multi-exon	FALSE	canonical	1	5179	junction_18	42849.17321677411	NA	0	NA	TRUE	NA	NA	NA	C	coding	1059	3180	40	3219	35.0	1049	False	ACTAAA	-8
PB.2715.6	chr12	-	3413	19	full-splice_match	LRIG3	ENST00000320743.7	4070	19	334	323	-32	76	multi-exon	FALSE	canonical	1	91173	junction_18	31645.881678942907	NA	1	NA	TRUE	NA	NA	NA	C	coding	1026	3081	233	3313	55.0	-1	True	TTTAAA	-43
PB.11230.2	chr8	-	2822	8	full-splice_match	PIP4P2	ENST00000518869.1	841	8	24	-2005	3	-10	multi-exon	FALSE	canonical	1	16485	junction_7	115652.01807127788	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	568	951	35.0	0	True	AATGAA	-10
PB.2715.1	chr12	-	4024	19	full-splice_match	LRIG3	ENST00000320743.7	4070	19	341	-295	-25	295	multi-exon	TRUE	canonical	1	91173	junction_18	31645.881678942907	NA	8	NA	TRUE	NA	NA	NA	C	coding	1026	3081	226	3306	40.0	6	True	AATATA	-12
PB.2715.2	chr12	-	3633	19	full-splice_match	LRIG3	ENST00000379141.8	3667	19	43	-9	43	9	multi-exon	FALSE	canonical	1	5179	junction_18	42849.17321677411	NA	1	NA	TRUE	NA	NA	NA	C	coding	1059	3180	22	3201	45.0	-10	True	AATAAA	-30
PB.2715.3	chr12	-	3623	19	full-splice_match	LRIG3	ENST00000320743.7	4070	19	354	93	-12	-93	multi-exon	FALSE	canonical	1	91173	junction_18	31645.881678942907	NA	0	NA	TRUE	NA	NA	NA	C	coding	1026	3081	213	3293	35.0	-14	True	ACTAAA	-8
PB.723.5	chr1	+	4456	11	novel_not_in_catalog	RPRD2	novel	4780	11	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	52093	junction_10	77691.70479916116	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	67	2871	100.0	-8907	False	NA	NA
PB.7344.3	chr20	-	6929	14	novel_not_in_catalog	ZNFX1	novel	5235	15	NA	NA	-25	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	90630.16951651208	NA	3	1	TRUE	NA	NA	NA	C	coding	1815	5448	119	5566	30.0	-34	True	ATTAAA	-14
PB.7344.2	chr20	-	7265	14	full-splice_match	ZNFX1	ENST00000396105.5	7371	14	102	4	-52	-4	multi-exon	FALSE	canonical	1	91040	junction_13	65772.98115721754	NA	17	NA	TRUE	NA	NA	NA	C	coding	1918	5757	146	5902	30.0	-61	True	ATTAAA	-14
PB.5081.5	chr17	-	2304	1	novel_in_catalog	SKAP1	novel	1534	13	NA	NA	-5051	14674	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-5037	False	NA	NA
PB.5081.4	chr17	-	1369	12	full-splice_match	SKAP1	ENST00000584924.5	1477	12	-40	148	16	143	multi-exon	FALSE	canonical	1	102433	junction_11	19056.045310505357	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	140	1219	45.0	9819	False	NA	NA
PB.5081.7	chr17	-	4372	4	incomplete-splice_match	SKAP1	ENST00000584924.5	1477	12	-32	205006	24	-161836	3prime_fragment	FALSE	canonical	1	102433	junction_3	21964.764252471883	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	132	470	85.0	9827	False	NA	NA
PB.5081.6	chr17	-	3956	5	novel_not_in_catalog	SKAP1	novel	1534	13	NA	NA	-21	-71434	any annotated donor/acceptor	FALSE	canonical	1	1590	junction_1	60027.877477885224	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	121	438	30.0	-27	True	ATTAAA	-17
PB.5081.1	chr17	-	1560	12	novel_in_catalog	SKAP1	novel	1534	13	NA	NA	-17	6	no_combination_of_known_junctions	TRUE	canonical	1	14764	junction_10	41943.82631351343	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	163	1170	10.0	-23	True	AATAAA	-31
PB.7344.8	chr20	-	6047	14	full-splice_match	ZNFX1	ENST00000396105.5	7371	14	175	1149	-3	-1149	multi-exon	FALSE	canonical	1	91040	junction_13	65772.98115721754	NA	1	NA	TRUE	NA	NA	NA	C	coding	1918	5757	73	5829	60.0	12	True	NA	NA
PB.5081.3	chr17	-	1697	14	novel_not_in_catalog	SKAP1	novel	1534	13	NA	NA	16	0	any annotated donor/acceptor	FALSE	canonical	1	1352	junction_10	54681.95202555816	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	521	1318	20.0	9819	False	AATAAA	-20
PB.5081.2	chr17	-	1610	13	full-splice_match	SKAP1	ENST00000336915.10	1534	13	-74	-2	11	2	multi-exon	FALSE	canonical	1	102433	junction_12	18943.67898681657	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	145	1224	15.0	3	True	AATAAA	-27
PB.583.4	chr1	+	2002	4	incomplete-splice_match	PRPF38B	ENST00000370022.9	1591	5	-23	14	-22	-14	intron_retention	FALSE	canonical	1	397428	junction_2	31272.244150719696	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	292	867	75.0	-26	True	NA	NA
PB.583.5	chr1	+	2780	4	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	-15	-14	intron_retention	FALSE	canonical	1	89713	junction_1	155786.49213801132	NA	0	NA	TRUE	NA	NA	NA	C	coding	96	291	285	575	75.0	-19	True	NA	NA
PB.583.6	chr1	+	1729	6	full-splice_match	PRPF38B	ENST00000370025.8	3693	6	-13	1977	-13	441	multi-exon	FALSE	canonical	1	311749	junction_4	144899.2900043337	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1446	283	1728	70.0	-17	True	NA	NA
PB.583.7	chr1	+	3082	6	full-splice_match	PRPF38B	ENST00000370025.8	3693	6	-8	619	-8	-619	multi-exon	FALSE	canonical	1	311749	junction_4	144899.2900043337	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	278	1918	5.0	-12	True	AATAAA	-19
PB.583.2	chr1	+	3294	9	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	-25	-612	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	250920.23557783756	NA	17	3	TRUE	NA	NA	NA	C	coding	349	1050	1074	2123	5.0	-29	True	AATAAA	-26
PB.583.3	chr1	+	1422	6	full-splice_match	PRPF38B	ENST00000370025.8	3693	6	-24	2295	-24	123	multi-exon	TRUE	canonical	1	311749	junction_4	144899.2900043337	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1128	294	1421	60.0	-28	True	NA	NA
PB.8853.25	chr4	-	4076	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	83080	junction_13	331602.132136933	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	125	3664	20.0	9361	False	ATTAAA	-13
PB.10180.1	chr6	-	3605	9	novel_not_in_catalog	ZUP1	novel	807	2	NA	NA	17	0	intron_retention	FALSE	canonical	1	23436	junction_3	46114.31020572681	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	228	1430	15.0	-12	True	AATAAA	-22
PB.10180.2	chr6	-	2613	10	novel_not_in_catalog	ZUP1	novel	807	2	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	8106	junction_9	48751.83426090211	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	663	2399	15.0	-26	True	AATAAA	-22
PB.7265.14	chr20	-	4536	18	novel_in_catalog	RBM39	novel	5914	18	NA	NA	12	0	intron_retention	FALSE	canonical	1	21894	junction_6	503237.7751872761	NA	3	1	TRUE	NA	NA	NA	C	coding	247	744	2425	3168	25.0	-13	False	AATAAA	-17
PB.10180.4	chr6	-	3712	9	novel_in_catalog	ZUP1	novel	807	2	NA	NA	6	-1	intron_retention	FALSE	canonical	1	83489	junction_8	30474.257667076567	NA	3	1	TRUE	NA	NA	NA	C	coding	490	1473	239	1711	10.0	-23	True	AATAAA	-21
PB.10180.5	chr6	-	1907	10	novel_in_catalog	ZUP1	novel	807	2	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	9861	junction_9	48251.491691647585	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	463	1695	10.0	-38	True	AATAAA	-20
PB.10180.6	chr6	-	3200	1	novel_in_catalog	ZUP1	novel	2195	10	NA	NA	6	-13585	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	193	582	1597	2178	95.0	-23	True	NA	NA
PB.10180.7	chr6	-	3028	1	genic	ZUP1	novel	NA	NA	NA	NA	-5	-13768	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	193	582	1608	2189	90.0	-34	True	NA	NA
PB.7872.1	chr22	+	3745	13	full-splice_match	TBC1D22A	ENST00000337137.8	3787	13	40	2	2	-2	multi-exon	FALSE	canonical	1	235499	junction_4	54120.58596165911	NA	2	NA	TRUE	NA	NA	NA	C	coding	517	1554	127	1680	10.0	1	True	AATAAA	-12
PB.6759.2	chr2	-	2243	16	full-splice_match	DARS	ENST00000264161.8	2361	16	108	10	-13	-10	multi-exon	FALSE	canonical	1	864112	junction_15	169291.7252034881	NA	50	5	TRUE	NA	NA	NA	C	coding	501	1506	109	1614	15.0	341	False	NA	NA
PB.6759.3	chr2	-	1702	16	full-splice_match	DARS	ENST00000264161.8	2361	16	74	585	-47	-2	multi-exon	FALSE	canonical	1	864112	junction_15	169291.7252034881	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	143	1648	95.0	15	True	NA	NA
PB.6759.4	chr2	-	1658	15	novel_in_catalog	DARS	novel	2361	16	NA	NA	58	-2	no_combination_of_known_junctions	FALSE	canonical	1	8645	junction_9	351745.69485708687	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	159	1604	95.0	-1	True	NA	NA
PB.6759.5	chr2	-	1598	16	novel_not_in_catalog	DARS	novel	2361	16	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	340471.1441057067	NA	10	1	TRUE	NA	NA	NA	C	coding	397	1194	351	1544	95.0	355	False	NA	NA
PB.6759.6	chr2	-	1623	16	novel_in_catalog	DARS	novel	2361	16	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	1	16719	junction_15	331630.9671667121	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	163	1569	95.0	-5	True	NA	NA
PB.8829.13	chr4	-	2157	21	novel_in_catalog	SDAD1	novel	650	4	NA	NA	0	4053	combination_of_known_junctions	FALSE	canonical	1	14828	junction_20	54864.77241862487	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1629	527	2155	75.0	-7	True	AAGAAA	-30
PB.7872.3	chr22	+	3078	9	incomplete-splice_match	TBC1D22A	ENST00000337137.8	3787	13	11	199496	11	182422	3prime_fragment	FALSE	canonical	1	235499	junction_4	48900.42574968034	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	156	1343	20.0	-28	True	AATAAA	-16
PB.9349.41	chr5	-	2040	1	novel_in_catalog	MCTP1	novel	5396	23	NA	NA	0	-62239	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-17
PB.9924.34	chr6	-	3618	7	novel_in_catalog	TAPBP	novel	3759	8	NA	NA	6	-5	intron_retention	FALSE	canonical	1	785673	junction_2	149808.94572272897	NA	11	1	TRUE	NA	NA	NA	C	coding	356	1071	487	1557	20.0	8923	False	AATAAA	-18
PB.1668.4	chr10	-	3412	15	novel_not_in_catalog	SHTN1	novel	6730	15	NA	NA	143	-3	any annotated donor/acceptor	FALSE	canonical	1	3256	junction_2	110805.60842267131	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	90	1640	20.0	15	True	ATTAAA	-20
PB.1668.7	chr10	-	4801	16	incomplete-splice_match	SHTN1	ENST00000355371.8	5361	17	393	15365	181	1570	3prime_fragment	FALSE	canonical	1	205832	junction_2	44260.18957252167	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	106	1782	75.0	1	True	NA	NA
PB.1668.1	chr10	-	3552	17	full-splice_match	SHTN1	ENST00000355371.8	5361	17	389	1420	177	0	multi-exon	FALSE	canonical	1	167753	junction_1	52834.99422727416	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	110	2005	20.0	-3	True	ATTAAA	-23
PB.1668.3	chr10	-	3338	15	novel_not_in_catalog	SHTN1	novel	6730	15	NA	NA	111	-1	any annotated donor/acceptor	FALSE	canonical	1	230	junction_2	111292.68044848306	NA	8	NA	TRUE	NA	NA	NA	C	coding	513	1542	23	1564	20.0	-5	True	ATTAAA	-22
PB.2456.1	chr12	+	3472	1	novel_in_catalog	AC009533.1	novel	3158	29	NA	NA	6779	-25756	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	346	False	NA	NA
PB.2456.2	chr12	+	3633	1	novel_in_catalog	AC009533.1	novel	3158	29	NA	NA	6789	-25585	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	356	False	NA	NA
PB.10721.1	chr7	-	2432	4	full-splice_match	GAL3ST4	ENST00000360039.8	2537	4	107	-2	-30	1	multi-exon	FALSE	canonical	1	20774	junction_3	12843.35172591468	NA	1	NA	TRUE	NA	NA	NA	A	coding	486	1461	287	1747	20.0	-27	True	AATAAA	-16
PB.1668.9	chr10	-	4580	16	incomplete-splice_match	SHTN1	ENST00000355371.8	5361	17	293	15686	81	1249	3prime_fragment	FALSE	canonical	1	205832	junction_2	44260.18957252167	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	206	1882	40.0	-5	True	NA	NA
PB.7872.4	chr22	+	2156	13	full-splice_match	TBC1D22A	ENST00000337137.8	3787	13	30	1601	0	0	multi-exon	FALSE	canonical	1	235499	junction_4	54120.58596165911	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	137	1690	15.0	-9	True	AATAAA	-22
PB.9924.39	chr6	-	2471	5	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-22	-902	intron_retention	FALSE	non_canonical	0	0	junction_1	426830.10199573264	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	31	930	85.0	-3	True	NA	NA
PB.7668.1	chr22	-	2587	14	novel_in_catalog	HPS4	novel	471	4	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	970	junction_1	96223.75118330703	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	503	2551	75.0	-6	True	NA	NA
PB.8829.14	chr4	-	2113	21	incomplete-splice_match	SDAD1	ENST00000395710.5	3080	22	-19	6163	3	4053	3prime_fragment	FALSE	canonical	1	26455	junction_19	49509.86637368354	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1629	483	2111	75.0	-19	True	AAGAAA	-30
PB.7872.6	chr22	+	2180	11	incomplete-splice_match	TBC1D22A	ENST00000337137.8	3787	13	40	137770	2	-136160	3prime_fragment	FALSE	canonical	1	235499	junction_4	56787.06358397131	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	127	1632	50.0	1	True	AATAAA	-9
PB.6194.8	chr19	-	4206	6	full-splice_match	ZNF160	ENST00000418871.5	4219	6	12	1	0	0	multi-exon	FALSE	canonical	1	44121	junction_4	48792.09446457489	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	288	2744	35.0	-1	True	AATAAA	-19
PB.7668.7	chr22	-	4109	13	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	1533	-1	intron_retention	FALSE	canonical	0	0	junction_2	99461.48008829431	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	1958	3349	10.0	-9	True	AGTAAA	-14
PB.6076.2	chr19	+	2580	2	full-splice_match	BLOC1S3	ENST00000433642.2	2601	2	21	0	21	0	multi-exon	FALSE	canonical	1	38299	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	76	684	10.0	-18	True	ATTAAA	-17
PB.6076.1	chr19	+	2786	1	full-splice_match	BLOC1S3	ENST00000587722.1	732	1	-205	-1849	-205	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	202	609	280	888	10.0	-1243	False	ATTAAA	-19
PB.9612.22	chr5	+	3616	28	incomplete-splice_match	DOCK2	ENST00000523351.6	4654	38	57519	2	161	0	5prime_fragment	FALSE	canonical	1	263563	junction_2	70462.20270782738	NA	0	NA	TRUE	NA	NA	NA	C	coding	992	2979	119	3097	25.0	NA	False	AATAAA	-19
PB.9612.23	chr5	+	3601	28	novel_not_in_catalog	DOCK2	novel	6097	52	NA	NA	2631	-1	any annotated donor/acceptor	FALSE	canonical	1	1741	junction_1	100346.48587965131	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	213	3083	25.0	NA	False	AATAAA	-18
PB.9612.20	chr5	+	3835	31	novel_not_in_catalog	DOCK2	novel	6097	52	NA	NA	-927	0	any annotated donor/acceptor	FALSE	canonical	1	3441	junction_1	99642.84613957773	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	113	3316	25.0	-3	True	AATAAA	-19
PB.6591.4	chr2	+	2443	12	novel_in_catalog	ELMOD3	novel	590	3	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	16091	junction_2	52109.797396720634	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1206	1655	15.0	3	True	AATAAA	-16
PB.9612.26	chr5	+	7241	1	novel_in_catalog	DOCK2	novel	6097	52	NA	NA	-20904	-31027	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	118	357	3	359	85.0	NA	False	NA	NA
PB.10529.2	chr7	-	5944	1	full-splice_match	PURB	ENST00000395699.3	9069	1	-11	3136	-11	-3136	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	312	939	25	963	85.0	-20	True	GGGGCT	-24
PB.10529.1	chr7	-	4005	1	full-splice_match	PURB	ENST00000395699.3	9069	1	1930	3134	1930	-3134	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	2049	False	GGGGCT	-26
PB.8587.11	chr3	+	3002	9	incomplete-splice_match	EIF4A2	ENST00000429589.5	1005	10	-1	-754	1	0	intron_retention	FALSE	canonical	1	70445	junction_7	939490.1823872017	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	181	813	20.0	-1	True	AATAAA	-16
PB.11969.1	chrX	+	620	3	full-splice_match	TMSB4X	ENST00000451311.6	628	3	-1	9	-1	-8	multi-exon	FALSE	canonical	1	845700	junction_2	4967953.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-4	True	AATAAA	-7
PB.11969.2	chrX	+	1701	2	full-splice_match	TMSB4X	ENST00000380636.1	1702	2	-3	4	-1	-4	multi-exon	FALSE	canonical	1	845700	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-4	True	AATAAA	-11
PB.11969.3	chrX	+	2115	1	novel_in_catalog	TMSB4X	novel	628	3	NA	NA	0	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-3	True	AATAAA	-11
PB.5135.9	chr17	-	2895	4	full-splice_match	SRSF1	ENST00000258962.4	1513	4	104	-1486	-10	-3	multi-exon	FALSE	canonical	1	1687503	junction_2	354759.4543032723	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	106	852	35.0	-19	True	ATTAAA	-14
PB.8587.14	chr3	+	1996	12	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	572904	junction_11	960824.0138555142	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	36	1124	15.0	-1	True	AATAAA	-17
PB.8587.17	chr3	+	1795	10	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	66426	junction_8	840582.7342069104	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	36	1169	15.0	-1	True	AATAAA	-17
PB.8587.16	chr3	+	1884	11	full-splice_match	EIF4A2	ENST00000323963.9	1919	11	29	6	1	0	multi-exon	FALSE	canonical	1	1541841	junction_10	772813.8791711753	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	36	1259	20.0	-1	True	AATAAA	-16
PB.5135.5	chr17	-	5415	3	full-splice_match	SRSF1	ENST00000582730.6	3117	3	-17	-2281	-5	2281	multi-exon	FALSE	canonical	1	1687503	junction_1	188309.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	142	747	30.0	-55	True	ATTAAA	-20
PB.5135.4	chr17	-	5182	4	full-splice_match	SRSF1	ENST00000258962.4	1513	4	103	-3772	-11	2283	multi-exon	FALSE	canonical	1	1687503	junction_2	354759.4543032723	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	107	853	35.0	-20	True	ATTAAA	-22
PB.5135.7	chr17	-	3106	3	full-splice_match	SRSF1	ENST00000582730.6	3117	3	9	2	9	-2	multi-exon	FALSE	canonical	1	1687503	junction_1	188309.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	116	721	35.0	-29	True	ATTAAA	-15
PB.5135.6	chr17	-	4288	5	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	-27	-12042	intron_retention	FALSE	canonical	1	544443	junction_1	741075.5486819056	NA	1	NA	TRUE	NA	NA	NA	B	coding	248	747	137	883	25.0	-50	True	ATTAAA	-19
PB.5135.1	chr17	-	4647	4	full-splice_match	SRSF1	ENST00000581979.5	1720	4	-41	-2886	0	2439	multi-exon	FALSE	canonical	1	544443	junction_1	646172.3630741948	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	137	742	15.0	-50	True	NA	NA
PB.5135.3	chr17	-	5340	4	full-splice_match	SRSF1	ENST00000258962.4	1513	4	101	-3928	-13	2439	multi-exon	FALSE	canonical	1	1687503	junction_2	354759.4543032723	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	109	855	15.0	-22	True	NA	NA
PB.5135.2	chr17	-	5557	3	full-splice_match	SRSF1	ENST00000582730.6	3117	3	-1	-2439	-1	2439	multi-exon	FALSE	canonical	1	1687503	junction_1	188309.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	126	731	15.0	-39	True	NA	NA
PB.3455.4	chr14	+	3358	2	full-splice_match	FBXO34	ENST00000313833.4	3464	2	106	0	-14	0	multi-exon	FALSE	canonical	1	76072	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	140	2275	40.0	-12	True	AATAAA	-19
PB.3455.5	chr14	+	3131	5	novel_not_in_catalog	FBXO34	novel	3464	2	NA	NA	-2	8222	any annotated donor/acceptor	FALSE	canonical	1	3395	junction_4	30208.029862728552	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	128	2263	20.0	0	True	AATAAA	-14
PB.3455.6	chr14	+	3329	2	novel_not_in_catalog	FBXO34	novel	3464	2	NA	NA	-269	0	any annotated donor/acceptor	FALSE	canonical	1	9566	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	711	2136	111	2246	40.0	-659	False	AATAAA	-19
PB.6923.2	chr2	-	2621	12	full-splice_match	HSPD1	ENST00000388968.7	2455	12	181	-347	0	347	multi-exon	FALSE	canonical	1	616249	junction_9	725493.8293174421	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	88	1809	40.0	-1	True	AATAAA	-17
PB.3455.1	chr14	+	3506	3	novel_not_in_catalog	FBXO34	novel	3464	2	NA	NA	-33	0	any annotated donor/acceptor	FALSE	canonical	1	2787	junction_1	3117.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	711	2136	288	2423	40.0	-31	True	AATAAA	-19
PB.3455.2	chr14	+	2459	2	full-splice_match	FBXO34	ENST00000313833.4	3464	2	88	917	-32	-391	multi-exon	FALSE	canonical	1	76072	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	158	2293	35.0	-30	True	NA	NA
PB.3455.3	chr14	+	3125	2	full-splice_match	FBXO34	ENST00000313833.4	3464	2	95	244	-25	-244	multi-exon	FALSE	canonical	1	76072	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	151	2286	35.0	-23	True	AATAAA	-20
PB.6923.9	chr2	-	2407	13	novel_not_in_catalog	HSPD1	novel	2455	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	4171	junction_5	870291.4211369525	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	62	1159	30.0	-1	True	AATAAA	-16
PB.6923.8	chr2	-	2417	12	novel_in_catalog	HSPD1	novel	2455	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	55932	junction_11	810584.4594322407	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	236	1957	30.0	-366	False	AATAAA	-16
PB.11377.9	chr8	-	2733	3	novel_in_catalog	NAPRT	novel	454	2	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	13672	junction_1	231706.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	12	473	10.0	0	True	GGGGCT	-35
PB.11377.8	chr8	-	2741	5	novel_in_catalog	NAPRT	novel	454	2	NA	NA	7	-1	intron_retention	FALSE	canonical	1	385861	junction_4	88509.7562514297	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	15	476	10.0	-3	True	GGGGCT	-35
PB.246.2	chr1	-	1794	6	novel_in_catalog	AL136115.2	novel	587	2	NA	NA	-9189	-56340	no_combination_of_known_junctions	FALSE	canonical	1	19878	junction_5	408628.3200746615	NA	5	1	TRUE	NA	NA	NA	B	coding	167	504	692	1195	95.0	-1	True	NA	NA
PB.1864.1	chr11	-	4574	17	incomplete-splice_match	LGR4	ENST00000379214.8	5206	18	59887	2	-27327	-2	5prime_fragment	FALSE	canonical	1	154797	junction_16	35693.15629759261	NA	5	1	TRUE	NA	NA	NA	A	coding	886	2661	10	2670	25.0	NA	False	ATTAAA	-14
PB.4282.4	chr16	-	4173	26	incomplete-splice_match	SMG1	ENST00000446231.6	16115	63	31	55828	31	-2895	3prime_fragment	FALSE	canonical	1	1040	junction_7	85559.31072975283	NA	0	NA	TRUE	NA	NA	NA	B	coding	1263	3789	383	4171	60.0	6459	False	NA	NA
PB.4282.2	chr16	-	6103	38	incomplete-splice_match	SMG1	ENST00000446231.6	16115	63	304	42602	8	284	3prime_fragment	TRUE	canonical	1	714	junction_11	100975.16044942294	NA	0	NA	TRUE	NA	NA	NA	B	coding	1998	5994	110	6103	30.0	6732	False	NA	NA
PB.4282.1	chr16	-	6429	39	novel_in_catalog	SMG1	novel	16115	63	NA	NA	36	284	combination_of_known_junctions	FALSE	canonical	1	714	junction_11	101616.60773648079	NA	0	NA	TRUE	NA	NA	NA	B	coding	1972	5916	514	6429	30.0	6464	False	NA	NA
PB.2968.18	chr12	-	2803	17	novel_not_in_catalog	ANAPC5	novel	1141	2	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	9236	junction_14	444786.4811221925	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	829	2682	10.0	15	False	AATAAA	-13
PB.2968.19	chr12	-	2416	17	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	1	7365	junction_3	401019.7881345709	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	101	1903	10.0	-1	True	AATAAA	-13
PB.246.3	chr1	-	1995	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16538	-56341	intron_retention	FALSE	non_canonical	0	0	junction_6	395626.4174317596	NA	0	NA	TRUE	NA	NA	NA	B	coding	167	504	894	1397	90.0	-12	False	NA	NA
PB.11377.2	chr8	-	1769	12	full-splice_match	NAPRT	ENST00000340490.7	1774	12	7	-2	7	0	multi-exon	TRUE	canonical	1	327866	junction_11	108756.95723040678	NA	3	NA	TRUE	NA	NA	NA	C	coding	585	1755	15	1769	0.0	-3	True	GGGGCT	-38
PB.2968.10	chr12	-	2345	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-11	7	combination_of_known_junctions	FALSE	canonical	1	2663	junction_15	475118.0909523396	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	284	2215	20.0	1	True	AATAAA	-22
PB.2968.11	chr12	-	2399	17	full-splice_match	ANAPC5	ENST00000261819.7	2513	17	112	2	-23	-1	multi-exon	FALSE	canonical	1	714280	junction_8	330295.2152907825	NA	4	NA	TRUE	NA	NA	NA	C	coding	755	2268	11	2278	10.0	89	False	AATAAA	-13
PB.2968.12	chr12	-	4009	15	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-4	0	intron_retention	FALSE	canonical	1	714280	junction_8	351735.61586924683	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	2622	3887	10.0	-14	True	AATAAA	-14
PB.2968.13	chr12	-	3534	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-22	0	intron_retention	FALSE	canonical	1	324078	junction_7	390667.11530744436	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	100	1368	10.0	0	True	AATAAA	-14
PB.2968.14	chr12	-	3290	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	324078	junction_8	391062.12133059144	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	1354	3168	10.0	-8	True	AATAAA	-14
PB.2968.15	chr12	-	2371	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	24262	junction_9	491692.1810098762	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1176	2249	10.0	-3	True	AATAAA	-14
PB.2968.16	chr12	-	2327	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	22	0	no_combination_of_known_junctions	FALSE	canonical	1	4898	junction_1	403545.44565485226	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	101	2191	10.0	-1	True	AATAAA	-14
PB.2968.17	chr12	-	3114	16	novel_in_catalog	ANAPC5	novel	1141	2	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	714280	junction_8	340468.9566106268	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	1728	2993	10.0	1	True	AATAAA	-13
PB.723.3	chr1	+	4640	11	full-splice_match	RPRD2	ENST00000369068.4	4612	11	-29	1	-26	-1	multi-exon	FALSE	canonical	1	143066	junction_4	42567.68338822304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1461	4386	34	4419	95.0	0	True	NA	NA
PB.11975.9	chrX	-	1442	7	full-splice_match	GPM6B	ENST00000454189.6	3957	7	-9	2524	-9	-26	multi-exon	FALSE	canonical	1	245284	junction_6	158691.35353231023	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	138	878	100.0	-10	True	AAAAAG	-18
PB.11975.8	chrX	-	1960	7	full-splice_match	GPM6B	ENST00000454189.6	3957	7	-1	1998	-1	500	multi-exon	FALSE	canonical	1	245284	junction_6	158691.35353231023	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	130	870	15.0	-2	True	AATAAA	-20
PB.5227.13	chr17	+	1987	8	full-splice_match	CD300A	ENST00000577511.1	1459	8	-36	-492	-36	-2	multi-exon	TRUE	canonical	1	359	junction_1	167738.04667555483	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	816	1325	30.0	-442	False	AGTAAA	-10
PB.11975.6	chrX	-	2396	7	novel_in_catalog	GPM6B	novel	3275	8	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	1	164687	junction_1	216367.96696497282	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	165	974	25.0	159	False	ATTAAA	-16
PB.5227.11	chr17	+	1664	6	novel_in_catalog	CD300A	novel	1785	7	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	1	34588	junction_1	184702.3096126305	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	601	1002	30.0	0	True	AGTAAA	-10
PB.5227.10	chr17	+	1521	6	full-splice_match	CD300A	ENST00000310828.9	631	6	-269	-621	7	-2	multi-exon	FALSE	canonical	1	29304	junction_1	94751.64980431739	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	299	859	30.0	0	True	AGTAAA	-10
PB.11975.3	chrX	-	2827	7	novel_in_catalog	GPM6B	novel	3275	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	164687	junction_1	216367.96696497282	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	168	977	25.0	156	False	AATAAA	-19
PB.11975.2	chrX	-	2933	7	novel_in_catalog	GPM6B	novel	3275	8	NA	NA	-37	108	combination_of_known_junctions	FALSE	canonical	1	164687	junction_1	216367.96696497282	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	166	975	30.0	158	False	AATAAA	-33
PB.11975.1	chrX	-	3046	7	novel_in_catalog	GPM6B	novel	3275	8	NA	NA	0	258	combination_of_known_junctions	FALSE	canonical	1	164687	junction_1	216367.96696497282	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	129	938	35.0	-1	True	ATTAAA	-10
PB.5227.14	chr17	+	1666	7	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-12	-2	no_combination_of_known_junctions	FALSE	canonical	1	1856	junction_1	157354.2157734157	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	495	1004	30.0	-418	False	AGTAAA	-10
PB.5129.6	chr17	-	2016	7	full-splice_match	COIL	ENST00000240316.4	2650	7	11	623	11	-623	multi-exon	FALSE	canonical	1	79027	junction_1	58912.738660430834	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	25	1755	10.0	-15	True	AAAACA	-31
PB.5129.5	chr17	-	2179	7	full-splice_match	COIL	ENST00000240316.4	2650	7	-4	475	-4	-475	multi-exon	FALSE	canonical	1	79027	junction_1	58912.738660430834	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	40	1770	20.0	-30	True	ATTAAA	-18
PB.5129.2	chr17	-	2745	6	novel_in_catalog	COIL	novel	2650	7	NA	NA	11	-15	intron_retention	FALSE	canonical	1	79027	junction_1	62868.85292607143	NA	2	1	TRUE	NA	NA	NA	C	coding	486	1461	25	1485	35.0	-15	True	AATAAA	-14
PB.5129.3	chr17	-	2536	6	novel_in_catalog	COIL	novel	2650	7	NA	NA	12	-15	no_combination_of_known_junctions	FALSE	canonical	1	2702	junction_4	84800.11646454266	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	24	1667	35.0	-14	True	AATAAA	-14
PB.5129.1	chr17	-	2624	7	full-splice_match	COIL	ENST00000240316.4	2650	7	12	14	12	-14	multi-exon	FALSE	canonical	1	79027	junction_1	58912.738660430834	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	24	1754	30.0	-14	True	AATAAA	-15
PB.16.4	chr1	+	1966	4	novel_not_in_catalog	CPTP	novel	1101	2	NA	NA	40	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	111388.11741035136	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	372	1016	10.0	5	True	AATAAA	-38
PB.8339.1	chr3	-	2891	8	full-splice_match	ILDR1	ENST00000462014.2	2866	8	-24	-1	-24	1	multi-exon	TRUE	canonical	1	24616	junction_7	6732.359549373519	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	206	1846	15.0	-36	False	AATAAA	-16
PB.16.1	chr1	+	1778	3	novel_not_in_catalog	CPTP	novel	1101	2	NA	NA	29	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	15214.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	375	830	10.0	-6	True	AATAAA	-36
PB.16.2	chr1	+	1955	2	full-splice_match	CPTP	ENST00000464957.1	1101	2	46	-900	35	-3	multi-exon	FALSE	canonical	1	30428	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	369	824	10.0	0	True	AATAAA	-35
PB.5677.1	chr19	+	1619	5	full-splice_match	RAB11B	ENST00000328024.10	1751	5	134	-2	-30	2	multi-exon	FALSE	canonical	1	1527111	junction_2	74542.20230304106	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	85	741	0.0	-30	True	NA	NA
PB.12355.2	chrX	-	1823	9	full-splice_match	FAM3A	ENST00000447601.6	1800	9	-25	2	-22	0	multi-exon	FALSE	canonical	1	296752	junction_7	122540.62786072218	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	493	1185	35.0	-33	True	AATAAA	-16
PB.12355.3	chrX	-	1706	10	full-splice_match	FAM3A	ENST00000359889.9	1712	10	-8	14	-2	0	multi-exon	FALSE	canonical	1	116911	junction_9	148784.87088145045	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	376	1068	35.0	-13	True	AATAAA	-16
PB.12355.1	chrX	-	1889	10	full-splice_match	FAM3A	ENST00000621967.4	1901	10	10	2	-2	0	multi-exon	FALSE	canonical	1	89722	junction_7	176949.86580008097	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	517	1251	35.0	-1	True	AATAAA	-16
PB.5677.2	chr19	+	1502	5	full-splice_match	RAB11B	ENST00000328024.10	1751	5	141	108	-23	-108	multi-exon	FALSE	canonical	1	1527111	junction_2	74542.20230304106	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	78	734	25.0	-23	True	NA	NA
PB.12355.4	chrX	-	1715	10	full-splice_match	FAM3A	ENST00000369641.7	1359	10	6	-362	-2	0	multi-exon	TRUE	canonical	1	59249	junction_4	180156.97307221615	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	364	1077	35.0	-1	True	AATAAA	-16
PB.5677.3	chr19	+	2334	4	full-splice_match	RAB11B	ENST00000594216.1	894	4	-38	-1402	-8	-108	multi-exon	FALSE	canonical	1	1527111	junction_2	57694.00155032488	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	63	602	25.0	-8	True	NA	NA
PB.8721.6	chr4	+	4709	13	full-splice_match	ZCCHC4	ENST00000302874.8	2785	13	-1	-1923	0	1923	multi-exon	FALSE	canonical	1	73587	junction_6	15521.238736316192	NA	18	2	TRUE	NA	NA	NA	C	coding	513	1542	26	1567	20.0	11	True	AATAAA	-16
PB.246.1	chr1	-	1899	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16528	-56340	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	395626.4174317596	NA	0	NA	TRUE	NA	NA	NA	B	coding	167	504	797	1300	95.0	-2	True	NA	NA
PB.11185.19	chr8	-	3615	8	incomplete-splice_match	STAU2	ENST00000523558.5	1603	10	-34	128479	5	-5	3prime_fragment	FALSE	canonical	1	7384	junction_7	107203.88872173072	NA	19	NA	TRUE	NA	NA	NA	C	coding	339	1020	199	1218	45.0	596	False	AGTAAA	-18
PB.8339.2	chr3	-	2943	9	novel_not_in_catalog	ILDR1	novel	2659	7	NA	NA	-56180	-1	any annotated donor/acceptor	TRUE	canonical	1	5325	junction_7	13767.179190356135	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	665	1900	15.0	-1	True	AATAAA	-14
PB.11596.1	chr9	+	3098	13	novel_not_in_catalog	MAMDC2	novel	3616	14	NA	NA	3114	10	any annotated donor/acceptor	FALSE	canonical	1	448	junction_1	26670.737405441192	NA	2	NA	TRUE	NA	NA	NA	B	coding	583	1752	399	2150	35.0	2121	False	AATAAA	-26
PB.6933.2	chr2	+	2935	5	full-splice_match	MAIP1	ENST00000392290.5	1386	5	180	-1729	-38	1729	multi-exon	FALSE	canonical	1	308426	junction_1	45190.31952476105	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	17	892	70.0	-10	True	NA	NA
PB.244.3	chr1	-	3518	4	novel_in_catalog	PEF1	novel	1629	5	NA	NA	11	-7	intron_retention	FALSE	canonical	1	248034	junction_3	116018.67743983676	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	2220	2774	15.0	-1	True	AATAAA	-14
PB.7821.8	chr22	+	1863	10	incomplete-splice_match	XRCC6	ENST00000405506.2	1958	11	14127	-6	14127	1	5prime_fragment	FALSE	canonical	1	667801	junction_3	305535.4655853301	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	208	1638	20.0	NA	False	AATAAA	-21
PB.1015.5	chr1	+	2115	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	28	3799	3	-67	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	216	1811	40.0	-48	True	AATAAA	-20
PB.7821.5	chr22	+	2065	13	novel_not_in_catalog	XRCC6	novel	2296	13	NA	NA	15	10	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	526213.3736531113	NA	7	1	TRUE	NA	NA	NA	C	coding	262	789	1034	1822	35.0	4	True	AATAAA	-39
PB.7821.4	chr22	+	1993	12	novel_in_catalog	XRCC6	novel	2296	13	NA	NA	14	1	no_combination_of_known_junctions	FALSE	canonical	1	14628	junction_11	553109.8914982806	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	53	1768	20.0	3	True	AATAAA	-21
PB.7821.7	chr22	+	1989	12	full-splice_match	XRCC6	ENST00000359308.8	2709	12	721	-1	88	1	multi-exon	FALSE	canonical	1	667801	junction_5	379701.55713552254	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	76	1764	20.0	53	False	AATAAA	-21
PB.7821.6	chr22	+	2317	13	full-splice_match	XRCC6	ENST00000405878.5	2200	13	-119	2	-8	-2	multi-exon	FALSE	canonical	1	12939	junction_1	474281.2493045544	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	266	2095	15.0	-676	False	AATAAA	-18
PB.7821.1	chr22	+	2109	13	full-splice_match	XRCC6	ENST00000360079.7	2296	13	188	-1	12	1	multi-exon	FALSE	canonical	1	667801	junction_6	430487.1540304577	NA	7	NA	TRUE	NA	NA	NA	C	coding	609	1830	55	1884	20.0	1	True	AATAAA	-21
PB.9308.9	chr5	-	2883	23	incomplete-splice_match	AP3B1	ENST00000255194.10	5838	27	28	38592	28	-18409	3prime_fragment	FALSE	canonical	1	267957	junction_20	85825.15242024728	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2733	149	2881	60.0	-36	True	NA	NA
PB.12293.12	chrX	-	5151	8	novel_in_catalog	RBMX	novel	837	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	87723	junction_5	149925.7176106262	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	156	941	15.0	-1	True	AATAAA	-13
PB.7821.2	chr22	+	2010	12	full-splice_match	XRCC6	ENST00000428575.6	2148	12	130	8	-2	1	multi-exon	FALSE	canonical	1	26159	junction_2	494911.0208456125	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	106	1785	20.0	-13	True	AATAAA	-21
PB.9308.8	chr5	-	3879	27	full-splice_match	AP3B1	ENST00000255194.10	5838	27	52	1907	-11	-94	multi-exon	FALSE	canonical	1	267957	junction_24	81037.04946330078	NA	3	1	TRUE	NA	NA	NA	C	coding	1094	3285	125	3409	25.0	-12	True	AATACA	-17
PB.8578.2	chr3	-	3589	16	full-splice_match	IGF2BP2	ENST00000382199.6	3688	16	38	61	6	-61	multi-exon	FALSE	canonical	1	37161	junction_1	59829.25970556175	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	59	1858	100.0	-12	True	NA	NA
PB.246.7	chr1	-	1557	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16515	-56747	intron_retention	FALSE	non_canonical	0	0	junction_6	395626.4174317596	NA	2	NA	TRUE	NA	NA	NA	B	coding	167	504	862	1365	70.0	11	True	AATAAA	-8
PB.8578.1	chr3	-	3475	15	full-splice_match	IGF2BP2	ENST00000346192.7	3291	15	-8	-176	-8	-60	multi-exon	FALSE	canonical	1	21258	junction_6	62593.614864302355	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	73	1743	95.0	8	True	NA	NA
PB.7231.4	chr20	-	2605	3	full-splice_match	PLAGL2	ENST00000246229.4	5705	3	-8	3108	-8	-3108	multi-exon	FALSE	canonical	1	68695	junction_1	7835.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	274	1764	20.0	-62	False	AATAAA	-26
PB.9131.4	chr5	+	1767	3	full-splice_match	ICE1	ENST00000505464.1	1074	3	-64	-629	-16	629	multi-exon	FALSE	canonical	1	101303	junction_1	7897.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	AATAAA	-18
PB.9131.1	chr5	+	7937	18	novel_not_in_catalog	ICE1	novel	613	11	NA	NA	-28	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	79001.8270526758	NA	3	1	TRUE	NA	NA	NA	C	coding	2189	6570	478	7047	25.0	-11	True	AATAAA	-21
PB.7231.1	chr20	-	5610	3	full-splice_match	PLAGL2	ENST00000246229.4	5705	3	48	47	48	-47	multi-exon	FALSE	canonical	1	68695	junction_1	7835.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	218	1708	25.0	-6	True	AAAAAG	-1
PB.7231.2	chr20	-	2633	1	incomplete-splice_match	PLAGL2	ENST00000246229.4	5705	3	12651	5	12651	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	1265	False	ATTAAA	-16
PB.9131.2	chr5	+	4202	3	full-splice_match	ICE1	ENST00000505464.1	1074	3	-65	-3063	-17	3063	multi-exon	FALSE	canonical	1	101303	junction_1	7897.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.12341.1	chrX	+	1434	2	full-splice_match	TMEM187	ENST00000369982.4	1880	2	407	39	-124	-39	multi-exon	FALSE	canonical	1	81964	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	261	786	341	1126	35.0	-20	True	AATAAA	-24
PB.9290.5	chr5	-	2562	8	novel_in_catalog	ANKRA2	novel	2063	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	155698	junction_7	28986.133816579488	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	660	1319	20.0	-7	True	AATAAA	-18
PB.9290.4	chr5	-	1690	9	novel_not_in_catalog	ANKRA2	novel	2063	9	NA	NA	74	-1	any annotated donor/acceptor	FALSE	canonical	1	2801	junction_1	71846.67127281803	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	296	1189	20.0	357	False	AATAAA	-19
PB.6594.11	chr2	+	3822	6	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1071348	junction_3	397045.70586440037	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	121	759	20.0	0	True	AATAAA	-18
PB.6594.10	chr2	+	4229	4	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1210558	junction_3	456759.70425815805	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	121	423	20.0	0	True	AATAAA	-17
PB.9290.1	chr5	-	2187	9	full-splice_match	ANKRA2	ENST00000296785.7	2063	9	15	-139	-4	139	multi-exon	FALSE	canonical	1	155698	junction_8	28755.986932887125	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	645	1586	40.0	8	True	AATAAA	-18
PB.6594.16	chr2	+	3383	8	novel_not_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	17304	junction_7	756762.046800656	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	121	1143	20.0	0	True	AATAAA	-18
PB.5455.4	chr18	-	1669	7	full-splice_match	TPGS2	ENST00000334295.8	4030	7	395	1966	4	0	multi-exon	FALSE	canonical	1	777705	junction_6	210095.17116905746	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	34	936	20.0	3	True	TATAAA	-17
PB.9290.2	chr5	-	2068	9	novel_in_catalog	ANKRA2	novel	2063	9	NA	NA	-5	6	combination_of_known_junctions	FALSE	canonical	1	24299	junction_7	65224.2279251928	NA	1	1	TRUE	NA	NA	NA	C	coding	245	738	863	1600	35.0	7	True	AATAAA	-26
PB.9554.2	chr5	+	3303	12	full-splice_match	PPARGC1B	ENST00000309241.9	10568	12	-21	7286	-8	18	multi-exon	FALSE	canonical	1	23953	junction_3	7266.337366739362	NA	1	NA	TRUE	NA	NA	NA	C	coding	1023	3072	54	3125	20.0	-20	True	TTTAAA	-30
PB.6594.19	chr2	+	1946	9	full-splice_match	MAT2A	ENST00000306434.7	2819	9	3	870	0	802	multi-exon	FALSE	canonical	1	715016	junction_8	552725.8510904728	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	121	1308	20.0	0	True	ATTAAA	-15
PB.6594.18	chr2	+	2746	10	novel_not_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	82	junction_1	709281.8251325303	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	243	1241	20.0	0	True	AATAAA	-17
PB.3756.1	chr15	-	3465	12	novel_not_in_catalog	LPCAT4	novel	2262	14	NA	NA	-31	3	intron_retention	FALSE	non_canonical	0	0	junction_7	199527.34786597488	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	108	767	30.0	504	False	AATGAA	-9
PB.3756.2	chr15	-	2261	13	novel_in_catalog	LPCAT4	novel	2262	14	NA	NA	-24	3	intron_retention	FALSE	canonical	1	137658	junction_12	147078.009176442	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	101	1444	30.0	-5	True	AATGAA	-9
PB.3756.3	chr15	-	1892	14	full-splice_match	LPCAT4	ENST00000314891.10	2262	14	82	288	-20	3	multi-exon	FALSE	canonical	1	137658	junction_13	141937.75492820496	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	97	1671	30.0	-1	True	AATGAA	-9
PB.1235.2	chr1	+	2663	19	novel_in_catalog	SDCCAG8	novel	699	5	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	41432	junction_7	66394.41843341284	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	125	2362	35.0	-6	True	AATAAA	-11
PB.1235.3	chr1	+	2834	5	incomplete-splice_match	SDCCAG8	ENST00000366541.7	2567	18	-5	211530	-5	2165	3prime_fragment	FALSE	canonical	1	155519	junction_1	65995.2562968544	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	124	765	70.0	-5	True	AATAAA	-17
PB.1235.1	chr1	+	1701	10	novel_not_in_catalog	SDCCAG8	novel	699	5	NA	NA	10	1644	any annotated donor/acceptor	TRUE	canonical	1	37361	junction_9	79203.02403707376	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	131	1213	20.0	-12	True	NA	NA
PB.1235.6	chr1	+	1926	8	novel_in_catalog	SDCCAG8	novel	699	5	NA	NA	5	-464	combination_of_known_junctions	FALSE	canonical	1	90072	junction_7	73587.47197473665	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	114	986	100.0	5	True	NA	NA
PB.1235.7	chr1	+	2276	8	novel_in_catalog	SDCCAG8	novel	699	5	NA	NA	7	-112	combination_of_known_junctions	FALSE	canonical	1	90072	junction_7	73587.47197473665	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	112	984	30.0	7	True	ATTAAA	-13
PB.1235.4	chr1	+	2574	18	full-splice_match	SDCCAG8	ENST00000366541.7	2567	18	-5	-2	-5	2	multi-exon	FALSE	canonical	1	102985	junction_14	53254.654747708	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	124	2265	15.0	-5	True	AATAAA	-19
PB.1235.5	chr1	+	1297	10	incomplete-splice_match	SDCCAG8	ENST00000366541.7	2567	18	0	169442	0	13755	3prime_fragment	FALSE	canonical	1	139475	junction_8	62656.00091051746	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1179	119	1297	70.0	0	True	NA	NA
PB.9280.4	chr5	-	1499	16	full-splice_match	GTF2H2	ENST00000274400.9	4336	16	-72	2909	1	3	multi-exon	FALSE	canonical	1	3186	junction_15	58731.20164364651	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	214	1401	40.0	NA	False	AATAAA	-42
PB.9280.5	chr5	-	1348	16	novel_in_catalog	GTF2H2	novel	4336	16	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	418	junction_15	58852.4209390083	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	69	1256	45.0	NA	False	AATAAA	-36
PB.9280.2	chr5	-	1828	17	full-splice_match	GTF2H2	ENST00000330280.11	2077	17	-23	272	1	-19	multi-exon	FALSE	canonical	1	212	junction_15	57797.8454747869	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	312	1499	35.0	NA	False	ATTAAA	-16
PB.9280.3	chr5	-	1445	16	novel_not_in_catalog	GTF2H2	novel	4336	16	NA	NA	1	75	any annotated donor/acceptor	FALSE	canonical	1	88	junction_15	58867.39631167286	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	88	1275	45.0	NA	False	ATTAAA	-23
PB.10316.1	chr6	+	968	4	full-splice_match	MRPL18	ENST00000367034.4	978	4	2	8	2	-8	multi-exon	FALSE	canonical	1	493597	junction_1	444495.7729030352	NA	1	NA	TRUE	NA	NA	NA	A	coding	180	543	121	663	25.0	-1	True	AATAAA	-19
PB.1751.4	chr11	-	3312	9	novel_in_catalog	SLC25A22	novel	2796	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	48749	junction_8	105591.73790240409	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	1222	1875	10.0	-19	True	AATAAA	-15
PB.8573.4	chr3	+	3408	14	full-splice_match	MAP3K13	ENST00000265026.7	9876	14	16	6452	16	44	multi-exon	FALSE	canonical	1	5937	junction_1	6634.649738149634	NA	0	NA	TRUE	NA	NA	NA	C	coding	966	2901	319	3219	45.0	0	True	NA	NA
PB.5455.5	chr18	-	3148	6	full-splice_match	TPGS2	ENST00000589049.5	1102	6	-100	-1946	-39	0	multi-exon	FALSE	canonical	1	777705	junction_5	214006.20761314378	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	115	798	20.0	278	False	TATAAA	-17
PB.246.5	chr1	-	1846	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16514	-56341	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	395626.4174317596	NA	2	1	TRUE	NA	NA	NA	B	coding	167	504	745	1248	90.0	12	True	NA	NA
PB.8573.5	chr3	+	3439	14	novel_in_catalog	MAP3K13	novel	2737	13	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	1	2876	junction_2	8050.106969041948	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	880	3084	85.0	25	True	NA	NA
PB.8140.2	chr3	+	2352	11	novel_not_in_catalog	HEMK1	novel	17064	11	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	31616	junction_8	78617.43080666018	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	270	1046	40.0	-42	True	AGTAAA	-13
PB.8140.3	chr3	+	2287	11	novel_not_in_catalog	HEMK1	novel	17064	11	NA	NA	15	-2	any annotated donor/acceptor	FALSE	canonical	1	27027	junction_2	88164.1434629748	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	525	980	40.0	-14	True	AGTAAA	-14
PB.9337.2	chr5	-	6128	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	222033	junction_1	120393.75475866217	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	369	1766	15.0	0	True	AGTAAA	-20
PB.11967.2	chrX	+	1653	7	full-splice_match	PRPS2	ENST00000380668.9	2511	7	5	853	5	204	multi-exon	FALSE	canonical	1	388717	junction_2	47492.33422850705	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	124	1080	30.0	-37	True	GATAAA	-16
PB.11967.3	chrX	+	2475	7	full-splice_match	PRPS2	ENST00000380668.9	2511	7	36	0	0	0	multi-exon	FALSE	canonical	1	388717	junction_2	47492.33422850705	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	93	1049	20.0	-6	True	AATAAA	-20
PB.11967.1	chrX	+	2792	7	full-splice_match	PRPS2	ENST00000380668.9	2511	7	3	-284	3	284	multi-exon	FALSE	canonical	1	388717	junction_2	47492.33422850705	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	126	1082	35.0	-39	True	ATTAAA	-24
PB.8011.14	chr3	-	1925	3	full-splice_match	LRRFIP2	ENST00000496825.2	409	3	-203	-1313	-10	-1124	multi-exon	FALSE	canonical	1	12779	junction_1	132802.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-27	True	NA	NA
PB.1583.8	chr10	-	3555	14	novel_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-3	no_combination_of_known_junctions	FALSE	canonical	1	675	junction_10	34623.62412005855	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	96	2327	40.0	-1	True	AATAAA	-24
PB.8573.2	chr3	+	3424	15	novel_in_catalog	MAP3K13	novel	1681	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2876	junction_3	72974.34222162316	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	865	3069	85.0	-14	True	NA	NA
PB.11787.14	chr9	-	1551	7	full-splice_match	PPP6C	ENST00000373547.8	4118	7	13	2554	13	-2553	multi-exon	FALSE	canonical	1	582164	junction_6	176368.7410500606	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	88	1005	0.0	-20	True	AATAAA	-16
PB.1583.3	chr10	-	3854	17	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-3	any annotated donor/acceptor	FALSE	canonical	1	479	junction_15	38135.49150515624	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	173	2626	40.0	-1	True	AATAAA	-24
PB.1244.2	chr1	+	1492	12	full-splice_match	SCCPDH	ENST00000366510.3	2503	12	340	671	340	-671	multi-exon	FALSE	canonical	1	516780	junction_1	192339.4113447105	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	37	1326	25.0	-25	True	ATTAAA	-33
PB.1583.1	chr10	-	3693	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	60	4	any annotated donor/acceptor	TRUE	canonical	1	15	junction_15	34204.83642345853	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	188	2458	30.0	3	True	AATAAA	-31
PB.1583.6	chr10	-	3594	15	full-splice_match	LOXL4	ENST00000260702.3	3653	15	56	3	56	-3	multi-exon	FALSE	canonical	1	35845	junction_14	26739.685669030805	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	96	2366	40.0	-1	True	AATAAA	-24
PB.1583.7	chr10	-	3617	15	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	57	-3	any annotated donor/acceptor	FALSE	canonical	1	526	junction_6	38275.03140729726	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	287	2389	40.0	0	True	AATAAA	-24
PB.1583.4	chr10	-	3786	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-3	any annotated donor/acceptor	FALSE	canonical	1	12156	junction_15	32555.29640773611	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	288	2558	40.0	-1	True	AATAAA	-24
PB.1583.5	chr10	-	3650	15	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-100	any annotated donor/acceptor	FALSE	canonical	1	675	junction_10	38638.97661166686	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	288	2519	15.0	-1	True	AATAAA	-23
PB.6799.4	chr2	+	2711	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	3	-62	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	174130.8624659506	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	151	2265	20.0	20	True	AATAAA	-40
PB.6812.22	chr2	-	1777	7	incomplete-splice_match	IFIH1	ENST00000649979.1	3544	16	-19	14360	13	12125	3prime_fragment	FALSE	canonical	1	178895	junction_5	40660.52115347542	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1413	365	1777	65.0	11	True	AATAGA	-4
PB.6812.21	chr2	-	1909	8	incomplete-splice_match	IFIH1	ENST00000649979.1	3544	16	-10	13004	-10	-12835	3prime_fragment	FALSE	canonical	1	178895	junction_6	39099.363427147546	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1554	356	1909	55.0	20	True	NA	NA
PB.6812.20	chr2	-	2131	9	incomplete-splice_match	IFIH1	ENST00000649979.1	3544	16	-21	11126	11	-10957	3prime_fragment	FALSE	canonical	1	173522	junction_1	42455.64881125214	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1764	367	2130	25.0	9	True	AAAAAG	-1
PB.6812.27	chr2	-	4205	1	novel_in_catalog	IFIH1	novel	3595	16	NA	NA	5	-4347	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	180	543	392	934	80.0	-16	True	NA	NA
PB.6812.26	chr2	-	3516	3	novel_not_in_catalog	IFIH1	novel	3544	16	NA	NA	0	1749	any annotated donor/acceptor	FALSE	canonical	1	2035	junction_2	1158.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	397	930	85.0	-21	True	NA	NA
PB.6812.25	chr2	-	3379	2	full-splice_match	IFIH1	ENST00000421365.2	1617	2	-13	-1749	6	1749	multi-exon	FALSE	canonical	1	309779	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	391	1056	85.0	-15	True	NA	NA
PB.6812.24	chr2	-	3948	2	full-splice_match	IFIH1	ENST00000421365.2	1617	2	1	-2332	1	2332	multi-exon	FALSE	canonical	1	309779	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	377	1042	35.0	-1	True	AATAAA	-19
PB.11152.19	chr8	-	4534	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	0	-674	combination_of_known_junctions	FALSE	canonical	1	284930	junction_17	780414.8285595194	NA	3	NA	TRUE	NA	NA	NA	C	coding	738	2217	189	2405	20.0	32	True	AATAAA	-17
PB.4049.1	chr15	-	1072	6	full-splice_match	SEC11A	ENST00000268220.11	1656	6	581	3	-8	-1	multi-exon	FALSE	canonical	1	791377	junction_3	623930.217276772	NA	0	NA	TRUE	NA	NA	NA	A	coding	179	540	61	600	25.0	3	True	AATAAA	-15
PB.9908.1	chr6	+	4047	1	intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-35	True	NA	NA
PB.9908.3	chr6	+	3046	2	intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	83978	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	2	True	NA	NA
PB.9908.2	chr6	+	2841	2	intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	83978	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-29	True	NA	NA
PB.9908.5	chr6	+	2740	2	intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	79584	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-24	True	NA	NA
PB.9908.4	chr6	+	3037	2	intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	79584	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	0.0	-27	True	NA	NA
PB.2043.1	chr11	-	524	5	full-splice_match	FAU	ENST00000529639.5	847	5	320	3	0	0	multi-exon	FALSE	canonical	1	3601801	junction_2	2034060.1300571691	NA	0	NA	TRUE	NA	NA	NA	A	coding	133	402	73	474	20.0	8145	False	AATAAA	-20
PB.6338.23	chr2	-	5267	21	full-splice_match	PUM2	ENST00000403432.5	3594	21	-147	-1526	1	80	multi-exon	FALSE	canonical	1	242233	junction_9	196833.014489408	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	272	3466	30.0	-16	True	GATAAA	-21
PB.9932.12	chr6	+	2113	9	incomplete-splice_match	ITPR3	ENST00000605930.2	9029	58	67856	1	67856	-1	5prime_fragment	FALSE	canonical	1	391079	junction_3	106857.43984035167	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	249	1325	30.0	-6356	False	AATAAA	-21
PB.9932.13	chr6	+	2495	8	novel_in_catalog	ITPR3	novel	9870	59	NA	NA	67980	0	intron_retention	FALSE	canonical	1	432641	junction_4	99404.96548657796	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	891	1706	30.0	-6232	False	AATAAA	-22
PB.1643.19	chr10	-	2317	20	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	2327	junction_18	166626.76302388273	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	243	1901	5.0	-3	True	AATAAA	-14
PB.5158.15	chr17	-	2138	16	incomplete-splice_match	USP32	ENST00000300896.8	5171	34	5	40495	5	-18	3prime_fragment	FALSE	canonical	1	205877	junction_12	64514.213657870256	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1947	191	2137	100.0	0	True	NA	NA
PB.656.7	chr1	-	2632	5	novel_in_catalog	SEC22B	novel	6922	5	NA	NA	107	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	85	642	10.0	-1	True	AATAAA	-19
PB.656.6	chr1	-	2764	5	novel_not_in_catalog	SEC22B	novel	6922	5	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	197	919	10.0	-1	True	AATAAA	-19
PB.656.1	chr1	-	3750	5	full-splice_match	SEC22B	ENST00000578049.3	6922	5	22	3150	22	-3150	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	170	760	10.0	26	True	AGTAAA	-21
PB.5158.11	chr17	-	5007	34	novel_in_catalog	USP32	novel	5171	34	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	1931	junction_14	133127.33203750208	NA	4	NA	TRUE	NA	NA	NA	C	coding	1618	4857	7	4863	50.0	405	False	AATAAA	-11
PB.7110.58	chr2	+	3434	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-3	-1	no_combination_of_known_junctions	FALSE	canonical	1	3978	junction_3	1142293.1137052875	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	98	1348	25.0	-14	True	AATAAA	-19
PB.5158.13	chr17	-	4952	33	novel_in_catalog	USP32	novel	5171	34	NA	NA	51	3	no_combination_of_known_junctions	FALSE	canonical	1	1931	junction_14	134898.5525031073	NA	2	NA	TRUE	NA	NA	NA	C	coding	1313	3942	858	4799	45.0	-1	True	AATAAA	-20
PB.1643.11	chr10	-	2422	20	full-splice_match	XPNPEP1	ENST00000322238.12	2467	20	45	0	3	0	multi-exon	FALSE	canonical	1	17577	junction_6	165724.9195027528	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	76	2004	5.0	44	False	AATAAA	-16
PB.1643.10	chr10	-	2362	20	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	28124	junction_19	157840.18862394363	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	74	1945	5.0	-11	True	AATAAA	-15
PB.1643.13	chr10	-	2275	19	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	8530	junction_16	174842.073686557	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	379	1857	5.0	-3	True	AATAAA	-16
PB.7110.55	chr2	+	3540	15	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1175270.3051656533	NA	7	3	TRUE	NA	NA	NA	C	coding	114	345	857	1201	25.0	-20	True	AATAAA	-20
PB.1643.15	chr10	-	2537	22	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	8547	junction_18	197066.30938667178	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	462	2120	5.0	-2	True	AATAAA	-15
PB.7110.53	chr2	+	3430	15	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	900	junction_10	1161552.1235624729	NA	23	2	TRUE	NA	NA	NA	C	coding	349	1050	296	1345	25.0	-21	True	AATAAA	-18
PB.1643.17	chr10	-	4740	21	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	8547	junction_17	201018.9242557215	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	476	1456	5.0	-16	True	AATAAA	-14
PB.1643.16	chr10	-	2324	20	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	12618	junction_14	170331.97533672533	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	51	1907	5.0	-28	True	AATAAA	-15
PB.11171.3	chr8	+	2489	19	novel_not_in_catalog	CSPP1	novel	567	6	NA	NA	-3	-9	any annotated donor/acceptor	FALSE	canonical	1	28170	junction_1	36725.14174883771	NA	0	NA	TRUE	NA	NA	NA	B	coding	768	2304	185	2488	70.0	-27	True	AATGAA	-20
PB.8577.1	chr3	-	2481	1	antisense	novelGene_SENP2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11171.1	chr8	+	2454	19	incomplete-splice_match	CSPP1	ENST00000262210.9	4367	29	-5	37231	-5	-4	3prime_fragment	FALSE	canonical	1	45221	junction_1	34667.00602754123	NA	0	NA	TRUE	NA	NA	NA	B	coding	806	2418	37	2454	65.0	-29	True	AATGAA	-25
PB.469.1	chr1	-	4357	11	full-splice_match	DEPDC1	ENST00000370966.9	4586	11	140	89	1	-89	multi-exon	FALSE	canonical	1	16198	junction_6	40816.73155324909	NA	3	NA	TRUE	NA	NA	NA	C	coding	527	1584	83	1666	25.0	0	True	NA	NA
PB.11171.5	chr8	+	1960	15	novel_in_catalog	CSPP1	novel	567	6	NA	NA	1	-26956	combination_of_known_junctions	FALSE	canonical	1	2995	junction_3	43430.64494016141	NA	0	NA	TRUE	NA	NA	NA	B	coding	519	1557	404	1960	25.0	-23	True	NA	NA
PB.11171.4	chr8	+	2545	20	novel_in_catalog	CSPP1	novel	567	6	NA	NA	1	12	combination_of_known_junctions	FALSE	canonical	1	29067	junction_4	40066.55161110749	NA	0	NA	TRUE	NA	NA	NA	B	coding	838	2514	31	2544	75.0	-23	True	AATGAA	-41
PB.12273.13	chrX	+	3489	11	full-splice_match	PHF6	ENST00000625464.2	4434	11	14	931	6	-929	multi-exon	FALSE	canonical	1	73610	junction_5	94606.09680269026	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	189	1289	45.0	14	True	AGTAAA	-16
PB.12273.12	chrX	+	3808	5	incomplete-splice_match	PHF6	ENST00000370800.4	1150	8	-54	18145	-1	-18145	3prime_fragment	FALSE	canonical	1	269853	junction_1	73363.61590521217	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	196	666	45.0	7	True	AATAAA	-15
PB.12273.11	chrX	+	3032	11	full-splice_match	PHF6	ENST00000370803.7	4489	11	62	1395	3	-1394	multi-exon	FALSE	canonical	1	238679	junction_10	60768.116303617644	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	200	1297	35.0	3	True	TTTAAA	-7
PB.12273.10	chrX	+	4319	11	full-splice_match	PHF6	ENST00000370803.7	4489	11	168	2	48	-1	multi-exon	FALSE	canonical	1	238679	junction_10	60768.116303617644	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	94	1191	10.0	6	True	AATAAA	-15
PB.8243.6	chr3	+	2175	3	full-splice_match	C3orf38	ENST00000318887.7	2633	3	242	216	-2	-216	multi-exon	FALSE	canonical	1	203727	junction_2	6064.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	329	990	69	1058	55.0	25	True	TATAAA	-13
PB.12273.15	chrX	+	4784	10	novel_not_in_catalog	PHF6	novel	4489	11	NA	NA	125	0	intron_retention	FALSE	canonical	1	4284	junction_1	116091.56576673794	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	228	1325	10.0	0	True	AATAAA	-16
PB.12273.14	chrX	+	3684	10	novel_in_catalog	PHF6	novel	4489	11	NA	NA	22	-613	no_combination_of_known_junctions	FALSE	canonical	1	13247	junction_2	114770.92462115597	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	173	1168	35.0	30	True	ATTAAA	-22
PB.582.1	chr1	+	5116	10	incomplete-splice_match	FAM102B	ENST00000370035.7	5600	11	40482	2	-24094	-2	5prime_fragment	FALSE	canonical	1	123542	junction_4	37870.93910463096	NA	2	NA	TRUE	NA	NA	NA	A	coding	298	897	45	941	20.0	9304	False	AATAAA	-19
PB.348.1	chr1	+	1638	11	full-splice_match	CDC20	ENST00000310955.10	1675	11	21	16	21	-16	multi-exon	TRUE	canonical	1	102329	junction_3	320288.5480354238	NA	0	NA	TRUE	NA	NA	NA	A	coding	499	1500	81	1580	20.0	-6	True	AATAAA	-16
PB.9785.1	chr6	-	2975	14	full-splice_match	CMAHP	ENST00000377993.8	1681	14	-509	-785	3	-9	multi-exon	FALSE	canonical	1	30419	junction_7	18615.97413052571	NA	0	NA	TRUE	NA	NA	NA	A	coding	486	1461	730	2190	40.0	-7	True	AATAAA	-11
PB.11116.2	chr8	-	2019	8	novel_in_catalog	RNF170	novel	1866	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	4319	junction_7	69708.12478104541	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	332	1108	95.0	7	True	NA	NA
PB.11116.3	chr8	-	1814	6	full-splice_match	RNF170	ENST00000319073.5	1265	6	-88	-461	-21	0	multi-exon	FALSE	canonical	1	21276	junction_2	57593.97104211516	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	201	551	95.0	618	False	NA	NA
PB.11116.1	chr8	-	1901	7	full-splice_match	RNF170	ENST00000527424.5	3880	7	32	1947	17	0	multi-exon	FALSE	canonical	1	132431	junction_6	16701.467913696157	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	214	990	95.0	13	True	NA	NA
PB.3725.15	chr15	-	4504	32	novel_not_in_catalog	CYFIP1	novel	6793	31	NA	NA	14	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	797	2394	1550	3943	20.0	-25	True	AATAAA	-13
PB.6799.7	chr2	+	3673	12	novel_not_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-11	any annotated donor/acceptor	FALSE	canonical	1	6278	junction_3	291715.7621290722	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	329	2443	25.0	-17	True	AATAAA	-15
PB.3725.11	chr15	-	5585	30	novel_in_catalog	CYFIP1	novel	6793	31	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	822	2469	2555	5023	20.0	-41	True	AATAAA	-14
PB.1556.10	chr10	-	1980	13	novel_in_catalog	TCTN3	novel	2739	14	NA	NA	6	-184	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	173192.08156462436	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	51	1793	10.0	4	True	AATAAA	-16
PB.11637.14	chr9	+	4480	6	full-splice_match	SPIN1	ENST00000375859.3	4484	6	2	2	2	-2	multi-exon	FALSE	canonical	1	237621	junction_1	136938.68002197187	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	277	1065	30.0	-24	True	AATAAA	-13
PB.9799.9	chr6	+	2913	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	8	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	81564.62511321544	NA	6	1	TRUE	NA	NA	NA	B	coding	305	918	346	1263	15.0	-9	True	NA	NA
PB.9799.8	chr6	+	4154	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	78032.60332777175	NA	6	1	TRUE	NA	NA	NA	B	coding	305	918	346	1263	20.0	-9	True	NA	NA
PB.10323.12	chr6	-	2473	5	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	-5	-41	any annotated donor/acceptor	FALSE	canonical	1	3256	junction_3	2091.7372564449865	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	15	False	NA	NA
PB.2970.20	chr12	-	5038	23	novel_not_in_catalog	KDM2B	novel	5224	23	NA	NA	-16	143	intron_retention	FALSE	non_canonical	0	0	junction_8	106127.4803389052	NA	2	1	TRUE	NA	NA	NA	C	coding	1308	3927	190	4116	0.0	4	True	AATAAA	-20
PB.2970.21	chr12	-	4636	23	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	-28	6	intron_retention	FALSE	canonical	1	31757	junction_22	99737.02139056275	NA	1	NA	TRUE	NA	NA	NA	C	coding	1305	3918	202	4119	20.0	-8	True	TTTAAA	-25
PB.2970.22	chr12	-	2989	12	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	3195	0	intron_retention	FALSE	canonical	1	52616	junction_11	90272.80815834517	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	148	2478	25.0	19	True	TTTAAA	-19
PB.1309.9	chr10	-	1913	14	full-splice_match	DCLRE1C	ENST00000378278.6	2354	14	-34	475	-10	96	multi-exon	FALSE	canonical	1	57724	junction_12	14838.153736489332	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1839	73	1911	30.0	3	True	GATAAA	-12
PB.2970.24	chr12	-	1822	6	incomplete-splice_match	KDM2B	ENST00000538503.5	6676	15	14979	64369	0	-32	internal_fragment	FALSE	canonical	1	117196	junction_1	13985.157580806876	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	81	1181	85.0	-3	True	NA	NA
PB.2970.25	chr12	-	2804	1	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	-4402	-1298	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-254	False	NA	NA
PB.2970.26	chr12	-	1884	3	incomplete-splice_match	KDM2B	ENST00000541511.1	528	4	1575	-1511	0	1511	5prime_fragment	FALSE	canonical	1	152109	junction_2	2319.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	81	479	0.0	-3	True	NA	NA
PB.9799.2	chr6	+	3410	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	0	6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	64801.15765507203	NA	4	1	TRUE	NA	NA	NA	B	coding	305	918	362	1279	15.0	-25	True	NA	NA
PB.7043.55	chr2	-	7384	4	incomplete-splice_match	SERPINE2	ENST00000409304.5	2161	9	-1	10205	-1	-508	3prime_fragment	FALSE	canonical	1	893005	junction_3	256428.7605779733	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	214	957	90.0	-4	True	NA	NA
PB.903.5	chr1	+	2811	16	full-splice_match	POU2F1	ENST00000367862.9	14038	16	-38	11265	-38	172	multi-exon	FALSE	canonical	1	8937	junction_1	29292.048745616197	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	274	2541	90.0	4	True	AAAACA	-45
PB.7043.57	chr2	-	2889	2	full-splice_match	SERPINE2	ENST00000489065.1	563	2	4	-2330	2	2330	multi-exon	FALSE	canonical	1	893005	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	1690	2091	20.0	-1	True	AATAAA	-18
PB.10323.10	chr6	-	3076	4	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	5	-6	intron_retention	FALSE	canonical	1	5074	junction_2	1627.1430996278928	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-19	True	AATAAA	-13
PB.7043.51	chr2	-	4177	5	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	3	3011	intron_retention	FALSE	canonical	1	2311	junction_1	571738.0326589704	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	210	956	30.0	0	True	ATTAAA	-19
PB.7043.50	chr2	-	1231	7	incomplete-splice_match	SERPINE2	ENST00000258405.8	2195	9	33	5253	2	4444	3prime_fragment	FALSE	canonical	1	200702	junction_1	616396.378393468	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1020	211	1230	60.0	-1	True	NA	NA
PB.7043.53	chr2	-	2078	6	incomplete-splice_match	SERPINE2	ENST00000409304.5	2161	9	2	6686	2	3011	3prime_fragment	FALSE	canonical	1	893005	junction_5	411366.1310542714	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	211	1248	30.0	-1	True	ATTAAA	-19
PB.7043.52	chr2	-	4048	5	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	3011	intron_retention	FALSE	canonical	1	893005	junction_4	372247.60949131695	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	211	1098	30.0	-1	True	ATTAAA	-19
PB.10323.17	chr6	-	2241	4	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	17	-41	any annotated donor/acceptor	FALSE	canonical	1	4091	junction_3	2015.8317279861324	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-7	True	NA	NA
PB.6641.1	chr2	-	3656	15	novel_not_in_catalog	SEMA4C	novel	3545	15	NA	NA	549	0	any annotated donor/acceptor	TRUE	canonical	1	14991	junction_14	108229.65346683422	NA	0	NA	TRUE	NA	NA	NA	B	coding	833	2502	277	2778	40.0	-18	True	AATAAA	-7
PB.6802.1	chr2	-	6931	35	full-splice_match	LY75	ENST00000263636.4	6886	35	-55	10	-16	-10	multi-exon	FALSE	canonical	1	81987	junction_34	34508.33240129856	NA	60	8	TRUE	NA	NA	NA	C	coding	1722	5169	84	5252	45.0	-10	False	AATAAA	-20
PB.11637.11	chr9	+	4659	7	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	7898	junction_1	223314.8512649175	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	456	1244	30.0	-29	True	AATAAA	-13
PB.11637.12	chr9	+	4231	5	full-splice_match	SPIN1	ENST00000485565.6	706	5	-36	-3489	-3	-2	multi-exon	FALSE	canonical	1	70359	junction_3	223674.88236430907	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	421	816	30.0	-29	True	AATAAA	-13
PB.11637.13	chr9	+	4008	4	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	-1	11	no_combination_of_known_junctions	FALSE	canonical	1	5922	junction_3	205296.8819544569	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-27	True	AATAAA	-26
PB.1309.3	chr10	-	2640	13	full-splice_match	DCLRE1C	ENST00000378246.6	2637	13	-3	0	-3	0	multi-exon	FALSE	canonical	1	10659	junction_9	24956.72342762678	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	471	2111	100.0	-13	True	NA	NA
PB.986.1	chr1	-	5011	12	full-splice_match	COLGALT2	ENST00000361927.8	5177	12	166	0	166	0	multi-exon	FALSE	canonical	1	22562	junction_11	11453.835597773632	NA	34	NA	TRUE	NA	NA	NA	A	coding	626	1881	207	2087	40.0	-1	True	ATTAAA	-15
PB.6799.1	chr2	+	3380	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-15	-10	combination_of_known_junctions	FALSE	canonical	1	28380	junction_3	253742.14284408765	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	203	2149	20.0	-32	True	AATAAA	-16
PB.6753.3	chr2	+	3390	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-10	3537	-7	967	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	41	2233	80.0	-37	True	ATTAAA	-28
PB.8638.14	chr3	+	2682	22	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-3	11208	any annotated donor/acceptor	FALSE	canonical	1	2282	junction_21	71052.962260205	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	19	2325	75.0	1	True	NA	NA
PB.8638.15	chr3	+	3184	22	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-3	1544	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	58231.72186392993	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	9	2342	20.0	11	True	AATAAA	-30
PB.8638.12	chr3	+	3053	20	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-4	1529	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	72254.66677732652	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	20	2227	5.0	0	True	AATAAA	-15
PB.8638.13	chr3	+	2257	20	incomplete-splice_match	LRCH3	ENST00000428136.2	5109	21	17	7571	-4	45	3prime_fragment	FALSE	canonical	1	127226	junction_14	39240.65859069619	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2238	20	2257	30.0	0	True	AATAAA	-23
PB.8638.10	chr3	+	3131	22	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-7	1528	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	58231.72186392993	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	23	2356	10.0	-3	True	AATAAA	-14
PB.8638.11	chr3	+	4108	15	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-6	-1546	any annotated donor/acceptor	FALSE	canonical	1	9919	junction_14	60477.52310907055	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	22	1674	45.0	-2	True	AATAAA	-19
PB.10142.17	chr6	-	1715	16	incomplete-splice_match	SEC63	ENST00000369002.8	6411	21	-9	25874	-9	-50	3prime_fragment	FALSE	canonical	1	92394	junction_1	201534.1923613184	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1524	190	1713	50.0	9	True	NA	NA
PB.10181.5	chr6	+	4222	15	novel_not_in_catalog	KPNA5	novel	689	6	NA	NA	-11	-7154	any annotated donor/acceptor	FALSE	canonical	1	926	junction_7	39565.08863472277	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	835	1833	80.0	-11	True	TTTAAA	-26
PB.10323.18	chr6	-	2307	3	novel_in_catalog	PDE10A	novel	760	3	NA	NA	-5	-148	intron_retention	FALSE	canonical	1	2278	junction_2	1398.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.686.6	chr1	-	2242	6	novel_in_catalog	TXNIP	novel	2926	8	NA	NA	21	189	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	214	645	314	958	65.0	-1	True	NA	NA
PB.686.7	chr1	-	1933	8	full-splice_match	TXNIP	ENST00000582401.5	2926	8	20	973	20	113	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	315	1490	40.0	-2	True	NA	NA
PB.686.4	chr1	-	3044	7	novel_in_catalog	TXNIP	novel	2926	8	NA	NA	-21	-9	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	356	1303	55.0	1541	False	AATAAA	-14
PB.8983.8	chr4	+	3666	11	full-splice_match	JADE1	ENST00000610919.4	5644	11	0	1978	0	912	multi-exon	FALSE	canonical	1	26985	junction_1	80726.63627211281	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	154	2682	85.0	-21	True	NA	NA
PB.11164.1	chr8	+	1710	1	full-splice_match	RRS1	ENST00000320270.3	1706	1	1	-5	1	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	365	1098	104	1201	30.0	-1	True	AATAAA	-32
PB.11637.18	chr9	+	4650	8	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	3220	junction_2	236728.69022756227	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	441	1229	20.0	7	True	AATAAA	-19
PB.6954.1	chr2	+	2237	1	incomplete-splice_match	BMPR2	ENST00000374580.8	11461	13	188575	4	100685	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	9894	False	ATTAAA	-16
PB.6753.7	chr2	+	6916	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-7	8	-4	-8	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	38	2230	45.0	-34	True	AATAAA	-13
PB.9690.1	chr6	-	1705	1	antisense	novelGene_IRF4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.379.15	chr1	-	3456	13	full-splice_match	GPBP1L1	ENST00000355105.7	3736	13	97	183	3	-183	multi-exon	FALSE	canonical	1	280510	junction_12	190119.26785288402	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	1265	2689	30.0	-7	True	AATAAA	-19
PB.2778.14	chr12	-	2184	16	incomplete-splice_match	PPP1R12A	ENST00000437004.6	4639	25	506	22920	-23	4	internal_fragment	FALSE	canonical	1	300019	junction_3	94647.57236273943	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2160	24	2183	75.0	-26	True	AAAACA	-32
PB.379.14	chr1	-	3444	13	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	31	-183	combination_of_known_junctions	FALSE	canonical	1	61556	junction_12	230505.26751043144	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1253	2677	30.0	-29	True	AATAAA	-19
PB.10181.1	chr6	+	4185	14	full-splice_match	KPNA5	ENST00000368564.6	11311	14	-24	7150	-24	-7150	multi-exon	FALSE	canonical	1	64004	junction_1	21003.004319331787	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	182	1792	90.0	-2769	False	TTTAAA	-30
PB.11838.3	chr9	+	3731	17	novel_not_in_catalog	MIGA2	novel	569	3	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	9994	junction_13	60560.92195983314	NA	0	NA	TRUE	NA	NA	NA	B	coding	491	1476	185	1660	10.0	-9	True	AATAAA	-21
PB.6753.5	chr2	+	4988	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-8	1937	-5	388	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	39	2231	35.0	-35	True	ATTAAA	-24
PB.379.17	chr1	-	3456	13	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	9	-183	combination_of_known_junctions	FALSE	canonical	1	5167	junction_12	242267.62991030017	NA	3	NA	TRUE	NA	NA	NA	C	coding	474	1425	1265	2689	30.0	5	True	AATAAA	-19
PB.12006.12	chrX	+	2111	2	incomplete-splice_match	EIF2S3	ENST00000253039.8	2858	12	18524	-837	-22	837	5prime_fragment	FALSE	canonical	1	64202	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	1309	1656	35.0	-3709	False	AATAAA	-19
PB.5702.1	chr19	-	1769	7	full-splice_match	CDC37	ENST00000591248.5	1377	7	-60	-332	-57	13	multi-exon	FALSE	canonical	1	1630745	junction_3	411156.1665624551	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	112	711	15.0	-49	False	AATAAA	-28
PB.6937.10	chr2	+	1394	12	full-splice_match	BZW1	ENST00000409600.5	6875	12	364	5117	0	-22	multi-exon	FALSE	canonical	1	396	junction_10	886544.858005029	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	92	1351	30.0	0	True	AGTAAA	-19
PB.5702.3	chr19	-	2076	6	novel_in_catalog	CDC37	novel	1608	8	NA	NA	5	1	intron_retention	FALSE	canonical	1	1630745	junction_3	420545.5130147033	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	1011	1658	5.0	16	True	AATAAA	-16
PB.5702.2	chr19	-	1621	8	full-splice_match	CDC37	ENST00000222005.6	1608	8	-7	-6	-7	6	multi-exon	FALSE	canonical	1	1630745	junction_3	386858.3995591004	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	62	1198	10.0	1	True	AATAAA	-21
PB.5702.4	chr19	-	1744	8	novel_in_catalog	CDC37	novel	1608	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	119575	junction_6	823253.9907219599	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	39	1328	5.0	24	True	AATAAA	-14
PB.6937.11	chr2	+	3041	12	novel_not_in_catalog	BZW1	novel	578	6	NA	NA	0	606	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	903679.1511809144	NA	2	1	TRUE	NA	NA	NA	C	coding	427	1284	92	1375	15.0	0	True	AATAAA	-25
PB.379.11	chr1	-	3399	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	31	-183	combination_of_known_junctions	FALSE	canonical	1	112552	junction_11	207349.59014246432	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1208	2632	30.0	-29	True	AATAAA	-19
PB.10181.2	chr6	+	2182	15	novel_not_in_catalog	KPNA5	novel	689	6	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	37878.04462370393	NA	4	NA	TRUE	NA	NA	NA	C	coding	233	702	1075	1776	20.0	-31	True	AATAAA	-17
PB.379.10	chr1	-	3092	10	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	24	-7	any annotated donor/acceptor	FALSE	canonical	1	375	junction_7	326335.46921447583	NA	3	NA	TRUE	NA	NA	NA	C	coding	335	1008	1142	2149	30.0	-36	True	AATAAA	-18
PB.8983.1	chr4	+	3573	9	full-splice_match	JADE1	ENST00000511647.5	3560	9	-15	2	-15	-2	multi-exon	FALSE	canonical	1	66321	junction_1	69533.69596091074	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	217	1746	20.0	-12	True	AATAAA	-17
PB.8505.9	chr3	+	1777	16	full-splice_match	NMD3	ENST00000351193.6	3049	16	18	1254	0	-951	multi-exon	FALSE	canonical	1	91003	junction_7	126840.47368547453	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	123	1634	50.0	-3	True	AATAAA	-22
PB.8394.1	chr3	-	3290	7	novel_in_catalog	TMCC1	novel	5631	4	NA	NA	5	-2868	combination_of_known_junctions	FALSE	canonical	1	55114	junction_5	40050.943841354514	NA	0	NA	TRUE	NA	NA	NA	A	coding	653	1962	543	2504	35.0	158	False	AATAAA	-29
PB.379.13	chr1	-	3366	12	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	5	-182	any annotated donor/acceptor	FALSE	canonical	1	7577	junction_11	233156.2415939822	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1174	2598	25.0	968	False	AATAAA	-20
PB.8505.3	chr3	+	2966	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	91003	junction_7	141437.9849272936	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	61	1572	25.0	-19	True	AATAAA	-29
PB.8505.2	chr3	+	3148	16	full-splice_match	NMD3	ENST00000351193.6	3049	16	26	-125	-8	125	multi-exon	FALSE	canonical	1	91003	junction_7	126840.47368547453	NA	9	1	TRUE	NA	NA	NA	C	coding	503	1512	115	1626	25.0	5	True	AATATA	-17
PB.8505.1	chr3	+	3117	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	7	125	combination_of_known_junctions	FALSE	canonical	1	91003	junction_7	141437.9849272936	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	84	1595	25.0	0	True	AATATA	-17
PB.379.12	chr1	-	3436	12	full-splice_match	GPBP1L1	ENST00000290795.7	3599	12	-22	185	-22	-183	multi-exon	FALSE	canonical	1	102794	junction_11	209699.26335907535	NA	4	NA	TRUE	NA	NA	NA	C	coding	474	1425	1245	2669	30.0	-32	True	AATAAA	-19
PB.8505.7	chr3	+	3039	16	full-splice_match	NMD3	ENST00000351193.6	3049	16	7	3	7	-3	multi-exon	FALSE	canonical	1	91003	junction_7	126840.47368547453	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	134	1645	25.0	-14	True	AATAAA	-29
PB.8505.6	chr3	+	3305	15	novel_in_catalog	NMD3	novel	589	6	NA	NA	7	-3	intron_retention	FALSE	canonical	1	91003	junction_6	123549.52147414329	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	940	1911	25.0	-14	True	AATAAA	-29
PB.8505.5	chr3	+	3126	16	novel_not_in_catalog	NMD3	novel	589	6	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	1211	junction_2	147954.97876983465	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	581	1732	25.0	-18	True	AATAAA	-29
PB.8505.4	chr3	+	2670	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	1	91003	junction_7	141437.9849272936	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	61	1572	20.0	-19	True	AATAAA	-18
PB.3592.2	chr14	-	1951	6	full-splice_match	ALKBH1	ENST00000216489.7	2594	6	-3	646	-3	25	multi-exon	FALSE	canonical	1	116225	junction_2	6534.21325026969	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	20	1189	35.0	-1	True	AATAAA	-16
PB.6519.3	chr2	+	4473	8	novel_in_catalog	PLEK	novel	2869	9	NA	NA	95	-1	intron_retention	FALSE	canonical	1	571712	junction_1	206490.72993374648	NA	3	NA	TRUE	NA	NA	NA	C	coding	229	690	85	774	15.0	0	True	AATAAA	-21
PB.3592.1	chr14	-	2595	6	full-splice_match	ALKBH1	ENST00000216489.7	2594	6	-2	1	-2	-1	multi-exon	FALSE	canonical	1	116225	junction_2	6534.21325026969	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	19	1188	20.0	0	True	AATAAA	-20
PB.6519.6	chr2	+	2671	9	full-splice_match	PLEK	ENST00000234313.7	2869	9	109	89	109	-89	multi-exon	FALSE	canonical	1	571712	junction_1	211633.07089479038	NA	2	NA	TRUE	NA	NA	NA	C	coding	350	1053	71	1123	30.0	0	True	AATAAA	-20
PB.6519.7	chr2	+	2857	10	novel_not_in_catalog	PLEK	novel	2869	9	NA	NA	61	-2	any annotated donor/acceptor	FALSE	canonical	1	19	junction_4	430645.90376999584	NA	15	2	TRUE	NA	NA	NA	C	coding	367	1104	119	1222	15.0	-7772	False	AATAAA	-20
PB.6519.4	chr2	+	2713	8	novel_in_catalog	PLEK	novel	2869	9	NA	NA	-28	-2	no_combination_of_known_junctions	FALSE	canonical	1	1054	junction_2	384994.4949320174	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	422	1078	15.0	-7861	False	AATAAA	-20
PB.6519.5	chr2	+	2601	10	novel_not_in_catalog	PLEK	novel	2869	9	NA	NA	109	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	347760.07089886017	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	71	1123	15.0	0	True	AATAAA	-21
PB.11444.6	chr9	-	4758	15	full-splice_match	ERMP1	ENST00000339450.9	5376	15	10	608	10	-608	multi-exon	FALSE	canonical	1	133754	junction_13	48622.141191654904	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	81	2795	20.0	-64	True	AATAAA	-43
PB.7295.1	chr20	+	3730	21	full-splice_match	TOP1	ENST00000361337.2	3738	21	5	3	5	-3	multi-exon	FALSE	canonical	1	73076	junction_18	315041.6196930812	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	246	2543	25.0	0	True	AATAAA	-18
PB.11780.25	chr9	+	2731	11	novel_in_catalog	NEK6	novel	2578	10	NA	NA	5	-1	no_combination_of_known_junctions	FALSE	canonical	1	21340	junction_1	267070.63743624085	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	198	1241	30.0	-5	True	AATAAA	-40
PB.8983.4	chr4	+	4923	11	full-splice_match	JADE1	ENST00000226319.10	5772	11	98	751	18	-751	multi-exon	FALSE	canonical	1	66321	junction_1	71935.22201182116	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	184	2712	85.0	21	True	NA	NA
PB.11444.4	chr9	-	5222	15	novel_not_in_catalog	ERMP1	novel	3554	16	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	71718.38460771267	NA	8	NA	TRUE	NA	NA	NA	C	coding	822	2469	184	2652	15.0	-46	True	AATAAA	-11
PB.8983.6	chr4	+	3556	9	incomplete-splice_match	JADE1	ENST00000512960.5	3000	11	38	8417	37	-164	3prime_fragment	FALSE	canonical	1	34706	junction_1	79309.87485608271	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	362	1891	30.0	-1439	False	AATAAA	-8
PB.11651.4	chr9	+	3084	18	full-splice_match	FGD3	ENST00000468206.6	3057	18	-14	-13	-14	-1	multi-exon	FALSE	canonical	1	106045	junction_2	53151.49057722948	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	591	2438	10.0	-11	True	AATAAA	-18
PB.8638.4	chr3	+	2160	15	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	4	-3513	any annotated donor/acceptor	FALSE	canonical	1	9919	junction_14	60477.52310907055	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	41	1693	35.0	-21	True	AATAAA	-14
PB.8638.5	chr3	+	4233	21	full-splice_match	LRCH3	ENST00000428136.2	5109	21	11	865	-10	-865	multi-exon	FALSE	canonical	1	14927	junction_20	56943.14156999067	NA	1	NA	TRUE	NA	NA	NA	C	coding	803	2412	26	2437	80.0	-6	True	TATAAA	-26
PB.8638.6	chr3	+	3215	22	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-10	1533	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	58231.72186392993	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	26	2359	10.0	-6	True	AATAAA	-19
PB.8638.7	chr3	+	3267	22	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-10	1530	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	58231.72186392993	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	26	2359	5.0	-6	True	AATAAA	-16
PB.8638.1	chr3	+	2829	12	incomplete-splice_match	LRCH3	ENST00000334859.8	2258	19	-48	22318	0	768	3prime_fragment	FALSE	canonical	1	136171	junction_1	33857.29919983928	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	54	1712	100.0	-284	False	NA	NA
PB.8638.2	chr3	+	3132	21	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	0	1528	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	61738.49337253057	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	45	2306	10.0	-25	True	AATAAA	-14
PB.8638.3	chr3	+	3362	21	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	4	1528	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	61738.49337253057	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	41	2302	10.0	-21	True	AATAAA	-14
PB.8734.1	chr4	-	3395	2	novel_in_catalog	TLR10	novel	3958	4	NA	NA	0	8	no_combination_of_known_junctions	FALSE	canonical	1	1635	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	78	2471	15.0	-1	True	NA	NA
PB.9026.2	chr4	-	1905	12	novel_in_catalog	GATB	novel	2385	13	NA	NA	8	-3	no_combination_of_known_junctions	FALSE	canonical	1	16661	junction_1	67461.29807318421	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	34	1572	35.0	-9	True	AATAAA	-31
PB.9026.3	chr4	-	4367	12	novel_in_catalog	GATB	novel	2385	13	NA	NA	11	-5	intron_retention	FALSE	canonical	1	187721	junction_11	35409.921034731924	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	31	1104	35.0	-6	True	AATAAA	-29
PB.9026.4	chr4	-	2019	13	full-splice_match	GATB	ENST00000263985.10	2385	13	24	342	0	3	multi-exon	FALSE	canonical	1	187721	junction_12	33905.87871952378	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	18	1691	40.0	7	True	AATAAA	-26
PB.9026.5	chr4	-	3323	11	incomplete-splice_match	GATB	ENST00000263985.10	2385	13	36	7401	-2	-6769	3prime_fragment	FALSE	canonical	1	187721	junction_10	29720.449577521533	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	18	1496	40.0	19	True	AATAAA	-8
PB.9026.6	chr4	-	1539	8	full-splice_match	GATB	ENST00000512306.5	1519	8	-22	2	-8	-2	multi-exon	FALSE	canonical	1	187721	junction_7	34371.57179343156	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	26	1099	45.0	-1	True	AATAAA	-19
PB.9026.7	chr4	-	3519	1	novel_in_catalog	GATB	novel	2385	13	NA	NA	-10	-35545	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	156	471	28	498	100.0	-3	True	NA	NA
PB.1097.1	chr1	-	4699	2	full-splice_match	C1orf74	ENST00000294811.2	4684	2	-16	1	-16	-1	multi-exon	FALSE	canonical	1	56991	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	274	1083	10.0	-21	False	ATTAAA	-15
PB.8734.3	chr4	-	4069	5	novel_in_catalog	TLR10	novel	3958	4	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	1	997	junction_3	15334.357573354679	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	758	3151	20.0	3	True	NA	NA
PB.10569.3	chr7	+	2253	11	full-splice_match	CCT6P1	ENST00000442266.2	1317	11	-68	-868	-68	868	multi-exon	FALSE	canonical	1	951	junction_3	50885.50928152336	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-9	True	AATAAA	-18
PB.11651.1	chr9	+	2429	16	novel_in_catalog	FGD3	novel	3321	18	NA	NA	-32	0	no_combination_of_known_junctions	TRUE	canonical	1	1840	junction_1	67981.54474156121	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	200	1786	15.0	-29	True	AATAAA	-15
PB.8083.27	chr3	-	1924	7	incomplete-splice_match	MAP4	ENST00000360240.10	5142	19	381	64173	-50	821	3prime_fragment	FALSE	canonical	1	635585	junction_6	200271.00700585416	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1785	139	1923	65.0	380	False	ATTAAA	-17
PB.9846.4	chr6	+	1745	3	full-splice_match	PRR3	ENST00000376557.3	1797	3	50	2	14	-2	multi-exon	FALSE	canonical	1	62262	junction_1	102984.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	16	519	20.0	0	True	AATAAA	-26
PB.9846.2	chr6	+	2022	5	full-splice_match	PRR3	ENST00000498336.5	2005	5	-20	3	16	-3	multi-exon	FALSE	canonical	1	41304	junction_3	91697.50573045867	NA	0	NA	TRUE	NA	NA	NA	C	coding	89	270	50	319	20.0	-9	True	AATAAA	-25
PB.9846.3	chr6	+	2744	5	novel_not_in_catalog	PRR3	novel	2254	4	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	6003	junction_2	100759.38094539882	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	31	345	20.0	10	True	AATAAA	-25
PB.9846.1	chr6	+	3739	4	novel_not_in_catalog	PRR3	novel	2254	4	NA	NA	122	-14	intron_retention	FALSE	canonical	1	6003	junction_1	116191.68530493049	NA	2	NA	TRUE	NA	NA	NA	C	coding	107	324	2248	2571	25.0	9	True	AATAAA	-14
PB.11780.27	chr9	+	2375	11	novel_in_catalog	NEK6	novel	2578	10	NA	NA	4	-358	no_combination_of_known_junctions	FALSE	canonical	1	21340	junction_1	267070.63743624085	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	199	1242	45.0	-6	True	TATAAA	-10
PB.4660.20	chr17	-	2034	12	incomplete-splice_match	TSR1	ENST00000301364.9	5188	15	1054	2813	4	-625	3prime_fragment	FALSE	canonical	1	331944	junction_11	135564.3959184242	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2007	27	2033	50.0	0	True	NA	NA
PB.7901.14	chr3	+	4916	27	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	24015.569177578884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	261	3776	30.0	3	True	AATAAA	-17
PB.1129.13	chr1	-	3107	21	novel_not_in_catalog	EPRS	novel	5014	32	NA	NA	35	-4	any annotated donor/acceptor	FALSE	canonical	1	1475	junction_20	309625.51530380617	NA	0	NA	TRUE	NA	NA	NA	C	coding	1000	3000	108	3107	70.0	176	False	NA	NA
PB.11032.12	chr8	-	4567	8	novel_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	2	-6	intron_retention	FALSE	canonical	1	451236	junction_6	110193.48425994586	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	1418	2035	30.0	1	True	ATTAAA	-15
PB.11032.15	chr8	-	5000	7	novel_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	2	-6	intron_retention	FALSE	canonical	1	451236	junction_5	113369.57278251024	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	2010	2468	30.0	1	True	ATTAAA	-15
PB.10569.2	chr7	+	2124	10	full-splice_match	CCT6P1	ENST00000443108.6	1170	10	-86	-868	-86	868	multi-exon	FALSE	canonical	1	951	junction_2	49311.04671469432	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-27	True	AATAAA	-18
PB.11032.17	chr8	-	3873	10	novel_not_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_1	228426.7126172224	NA	2	1	TRUE	NA	NA	NA	C	coding	440	1323	138	1460	40.0	-1	True	ATTAAA	-12
PB.11747.3	chr9	+	4328	9	full-splice_match	TMEM268	ENST00000288502.8	2314	9	242	-2256	-10	-5	multi-exon	FALSE	canonical	1	17285	junction_1	48418.21096172777	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	196	1224	30.0	-8	True	NA	NA
PB.3804.14	chr15	-	2090	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	0	-182	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	191024.64184223174	NA	1	NA	TRUE	NA	NA	NA	B	coding	555	1668	36	1703	25.0	-19	True	NA	NA
PB.3804.15	chr15	-	1952	15	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-33	275	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	133678.89249053082	NA	0	NA	TRUE	NA	NA	NA	B	coding	480	1443	72	1514	85.0	-10	False	NA	NA
PB.4608.3	chr16	-	2066	3	novel_in_catalog	APRT	novel	947	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	1883148	junction_2	118345.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	1092	1412	15.0	-1	True	AGTAAA	-13
PB.4608.2	chr16	-	2471	1	novel_in_catalog	APRT	novel	947	5	NA	NA	3	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	130	393	1852	2244	15.0	-14	True	AGTAAA	-13
PB.3804.10	chr15	-	2183	20	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	13	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	217626.4674728829	NA	1	1	TRUE	NA	NA	NA	B	coding	414	1245	388	1632	90.0	-1	True	AAAAAG	-41
PB.3804.11	chr15	-	2060	19	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	1	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	223433.45213414964	NA	0	NA	TRUE	NA	NA	NA	B	coding	414	1245	265	1509	90.0	1859	False	AAAAAG	-41
PB.1457.5	chr10	-	2724	14	full-splice_match	PSAP	ENST00000394936.7	2872	14	124	24	74	-23	multi-exon	FALSE	canonical	1	4769161	junction_13	2170345.947971576	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	31	1605	45.0	-3	True	ATTAAA	-44
PB.392.2	chr1	-	5629	10	novel_in_catalog	EFCAB14	novel	5767	11	NA	NA	-56	-2	combination_of_known_junctions	FALSE	canonical	1	112291	junction_8	170322.10009998447	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	1034	2329	30.0	-17	True	AATAAA	-20
PB.11747.1	chr9	+	3274	9	full-splice_match	TMEM268	ENST00000288502.8	2314	9	262	-1222	10	679	multi-exon	FALSE	canonical	1	17285	junction_1	48418.21096172777	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	176	1204	65.0	12	True	NA	NA
PB.5346.1	chr17	+	3098	12	novel_in_catalog	HEXDC	novel	2285	12	NA	NA	-1	1	intron_retention	FALSE	canonical	1	69973	junction_1	62796.87115975242	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	97	1605	25.0	-6629	False	AATAAA	-17
PB.1457.6	chr10	-	2981	14	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	75	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	3766401.375685635	NA	1	1	TRUE	NA	NA	NA	C	coding	540	1623	30	1652	15.0	-2	True	AATAAA	-15
PB.5346.2	chr17	+	1800	13	full-splice_match	HEXDC	ENST00000327949.14	1853	13	54	-1	2	1	multi-exon	FALSE	canonical	1	69973	junction_1	64979.42410165955	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	78	1538	25.0	-6610	False	AATAAA	-21
PB.6840.5	chr2	+	4166	10	novel_in_catalog	PDK1	novel	842	5	NA	NA	-10	-312	intron_retention	FALSE	canonical	1	1355	junction_8	87699.06135497238	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	111	1310	40.0	-49	True	AATAAA	-21
PB.6840.4	chr2	+	4535	11	full-splice_match	PDK1	ENST00000282077.7	14193	11	121	9537	-12	-5	multi-exon	FALSE	canonical	1	168290	junction_1	48804.8633876789	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	62	1372	45.0	0	True	AATAAA	-12
PB.6840.7	chr2	+	4178	10	novel_in_catalog	PDK1	novel	842	5	NA	NA	11	-313	intron_retention	FALSE	canonical	1	30822	junction_6	83179.85476731196	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	90	938	40.0	-28	True	AATAAA	-20
PB.1457.7	chr10	-	2812	15	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	76	0	any annotated donor/acceptor	FALSE	canonical	1	15	junction_8	4110786.6839016327	NA	3	1	TRUE	NA	NA	NA	C	coding	237	714	861	1574	15.0	-1	True	AATAAA	-15
PB.6840.1	chr2	+	4221	12	full-splice_match	PDK1	ENST00000392571.6	1515	12	120	-2826	25	-342	multi-exon	FALSE	canonical	1	34766	junction_3	92919.81093180993	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	25	1395	50.0	37	True	AATAAA	-27
PB.8527.19	chr3	-	2807	15	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	-35	897	combination_of_known_junctions	FALSE	canonical	1	43323	junction_14	177800.94600222382	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	213	1757	20.0	-1	True	ATTAAA	-16
PB.6840.3	chr2	+	5413	11	full-splice_match	PDK1	ENST00000282077.7	14193	11	61	8719	-21	813	multi-exon	FALSE	canonical	1	168290	junction_1	48804.8633876789	NA	3	NA	TRUE	NA	NA	NA	C	coding	436	1311	122	1432	45.0	-60	False	AATACA	-16
PB.6464.2	chr2	-	2066	10	full-splice_match	ASB3	ENST00000263634.7	2214	10	-29	177	-27	140	multi-exon	FALSE	canonical	1	117747	junction_9	60054.00488531495	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	165	1721	35.0	-30	True	AATAAA	-23
PB.11838.2	chr9	+	4244	16	novel_in_catalog	MIGA2	novel	569	3	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	88559	junction_1	45788.780504204544	NA	0	NA	TRUE	NA	NA	NA	B	coding	534	1605	192	1796	10.0	8	True	AATAAA	-22
PB.10937.6	chr7	+	3245	15	full-splice_match	NUB1	ENST00000470229.6	3210	15	-22	-13	-14	-5	multi-exon	FALSE	canonical	1	21215	junction_1	224631.03694127224	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	179	2026	40.0	-22	True	AATAAA	-18
PB.11747.4	chr9	+	3535	9	novel_in_catalog	TMEM268	novel	2314	9	NA	NA	-2	714	intron_retention	FALSE	canonical	1	11374	junction_2	60082.27812745098	NA	2	NA	TRUE	NA	NA	NA	C	coding	321	966	465	1430	35.0	0	True	AATAAA	-18
PB.7901.13	chr3	+	7638	28	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	22585.33527208613	NA	1	NA	TRUE	NA	NA	NA	C	coding	1224	3675	263	3937	30.0	1	True	AATAAA	-21
PB.5395.1	chr18	-	2767	14	novel_not_in_catalog	PIEZO2	novel	9356	51	NA	NA	12621	-10803	any annotated donor/acceptor	FALSE	canonical	1	1600	junction_13	15742.423985738205	NA	1	NA	TRUE	NA	NA	NA	B	coding	703	2112	210	2321	55.0	NA	False	AATAAA	-12
PB.3656.14	chr14	+	4140	21	novel_not_in_catalog	PAPOLA	novel	547	5	NA	NA	5	-28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	309801.96722769126	NA	5	1	TRUE	NA	NA	NA	C	coding	693	2082	26	2107	85.0	-3	True	NA	NA
PB.5395.2	chr18	-	3324	9	novel_not_in_catalog	PIEZO2	novel	9356	51	NA	NA	12614	2088	any annotated donor/acceptor	FALSE	canonical	1	1600	junction_8	18205.642646924058	NA	2	NA	TRUE	NA	NA	NA	B	coding	385	1158	217	1374	80.0	NA	False	AATAGA	-8
PB.5973.2	chr19	-	1224	8	full-splice_match	YIF1B	ENST00000592694.5	1181	8	-53	10	-4	0	multi-exon	FALSE	canonical	1	280733	junction_7	303838.8580441136	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	51	986	10.0	5917	False	AATAAA	-17
PB.2593.4	chr12	-	2039	16	novel_not_in_catalog	MCRS1	novel	636	7	NA	NA	5	1	any annotated donor/acceptor	FALSE	canonical	1	907	junction_14	282581.74714978004	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	269	1696	15.0	8	True	AATAAA	-20
PB.2593.5	chr12	-	3071	13	novel_in_catalog	MCRS1	novel	636	7	NA	NA	3	-3	intron_retention	FALSE	canonical	1	515708	junction_12	125353.50154028296	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	1918	2733	30.0	-11	True	AATAAA	-15
PB.2593.6	chr12	-	2084	15	incomplete-splice_match	MCRS1	ENST00000550165.5	1936	16	208	-58	-20	-3	5prime_fragment	FALSE	canonical	1	38863	junction_14	229599.4850988969	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	358	1746	30.0	238	False	AATAAA	-15
PB.2593.7	chr12	-	1807	14	novel_in_catalog	MCRS1	novel	636	7	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	23753	junction_7	293513.85373545665	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	125	928	30.0	-11	True	AATAAA	-15
PB.11674.7	chr9	-	3943	10	novel_not_in_catalog	TSTD2	novel	4320	10	NA	NA	-57	-4	any annotated donor/acceptor	FALSE	canonical	1	302	junction_8	44313.26073354912	NA	2	1	TRUE	NA	NA	NA	C	coding	464	1395	167	1561	40.0	0	True	AATAAA	-18
PB.2593.1	chr12	-	2453	14	novel_in_catalog	MCRS1	novel	636	7	NA	NA	1	1	intron_retention	FALSE	canonical	1	515708	junction_13	136120.79560079746	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	761	2110	15.0	-21	False	AATAAA	-20
PB.2593.2	chr12	-	2252	15	novel_in_catalog	MCRS1	novel	636	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	10974	junction_13	230923.20192864898	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	482	1909	15.0	5	True	AATAAA	-20
PB.2593.3	chr12	-	1934	15	full-splice_match	MCRS1	ENST00000343810.8	1928	15	14	-20	6	1	multi-exon	FALSE	canonical	1	448012	junction_13	152352.8782173886	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	203	1591	15.0	-8	True	AATAAA	-20
PB.9420.16	chr5	+	2337	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	26	-135	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	13	1197	30.0	4	True	TATAAA	-12
PB.1053.1	chr1	+	3555	14	full-splice_match	SOX13	ENST00000367204.5	3587	14	30	2	30	0	multi-exon	FALSE	canonical	1	73982	junction_1	45757.08334714823	NA	0	NA	TRUE	NA	NA	NA	A	coding	622	1869	80	1948	15.0	2	True	AATAAA	-16
PB.10213.5	chr6	-	4438	30	full-splice_match	MED23	ENST00000368060.7	4446	30	0	8	0	-8	multi-exon	FALSE	canonical	1	5781	junction_1	64102.62569636019	NA	0	NA	TRUE	NA	NA	NA	C	coding	1364	4095	181	4275	30.0	0	True	AGTAAA	-13
PB.10213.4	chr6	-	5218	29	novel_not_in_catalog	MED23	novel	4581	31	NA	NA	9	-8	intron_retention	FALSE	non_canonical	0	0	junction_19	64756.72372231879	NA	5	NA	TRUE	NA	NA	NA	C	coding	1374	4125	172	4296	30.0	9	True	AGTAAA	-13
PB.10213.2	chr6	-	5098	29	full-splice_match	MED23	ENST00000368068.7	5233	29	111	24	-52	-8	multi-exon	FALSE	canonical	1	106016	junction_24	55359.41373706215	NA	1	NA	TRUE	NA	NA	NA	C	coding	1368	4107	70	4176	30.0	23	True	AGTAAA	-13
PB.10213.1	chr6	-	4583	30	novel_in_catalog	MED23	novel	4581	31	NA	NA	2	-2	combination_of_known_junctions	TRUE	canonical	1	20823	junction_1	62693.82504634517	NA	0	NA	TRUE	NA	NA	NA	C	coding	1359	4080	179	4258	25.0	2	True	ATTAAA	-18
PB.9420.10	chr5	+	2480	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	13	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	3	NA	TRUE	NA	NA	NA	C	coding	394	1185	26	1210	35.0	-9	True	AATAAA	-22
PB.10213.9	chr6	-	5062	29	novel_not_in_catalog	MED23	novel	4581	31	NA	NA	-12	-8	intron_retention	FALSE	canonical	1	2274	junction_19	64522.87942054441	NA	0	NA	TRUE	NA	NA	NA	C	coding	1315	3948	193	4140	30.0	-12	True	AGTAAA	-13
PB.10213.8	chr6	-	5056	29	novel_not_in_catalog	MED23	novel	4581	31	NA	NA	1	-8	intron_retention	FALSE	canonical	1	884	junction_28	65624.31606088695	NA	0	NA	TRUE	NA	NA	NA	C	coding	1344	4035	100	4134	30.0	25	True	AGTAAA	-13
PB.8286.4	chr3	-	1708	12	novel_not_in_catalog	IFT57	novel	3203	11	NA	NA	12	-1459	any annotated donor/acceptor	FALSE	canonical	1	2782	junction_9	226618.83257189358	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	102	1502	40.0	-15	True	AATAAA	-23
PB.1342.11	chr10	-	3649	20	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	8	-5	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	339373.95363739866	NA	2	1	TRUE	NA	NA	NA	C	coding	683	2052	175	2226	40.0	-1	True	ATTAAA	-18
PB.1342.10	chr10	-	3714	20	novel_not_in_catalog	YME1L1	novel	4127	18	NA	NA	-2	-5	intron_retention	FALSE	non_canonical	0	0	junction_19	339373.95363739866	NA	2	1	TRUE	NA	NA	NA	C	coding	716	2151	46	2196	40.0	10	True	ATTAAA	-18
PB.1342.12	chr10	-	3581	17	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	8	-5	intron_retention	FALSE	canonical	1	8175	junction_15	350051.82106223126	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	504	2063	40.0	-1	True	ATTAAA	-18
PB.8011.5	chr3	-	2352	15	full-splice_match	LRRFIP2	ENST00000421276.6	2522	15	159	11	-34	-11	multi-exon	FALSE	canonical	1	278383	junction_14	192362.32862275394	NA	3	NA	TRUE	NA	NA	NA	C	coding	424	1275	242	1516	30.0	364	False	ATTAAA	-12
PB.9420.13	chr5	+	2865	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	22	-517	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	3	NA	TRUE	NA	NA	NA	C	coding	394	1185	17	1201	90.0	0	True	NA	NA
PB.1342.19	chr10	-	3571	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	0	285	0	-285	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	183	2333	30.0	1591	False	AATAAA	-18
PB.8011.4	chr3	-	2612	16	novel_in_catalog	LRRFIP2	novel	2821	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	19094	junction_7	240795.52925353262	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	391	1767	25.0	-7	True	ATTAAA	-21
PB.465.59	chr1	-	1367	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	1	5308	1	98	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	115	1278	65.0	3	True	AAGAAA	-3
PB.465.58	chr1	-	1432	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-30	2080	-1	98	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	117	1343	65.0	1	True	AAGAAA	-3
PB.11780.23	chr9	+	3101	1	novel_in_catalog	NEK6	novel	2578	10	NA	NA	241	-61591	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	1880	2245	100.0	-1202	False	NA	NA
PB.8011.7	chr3	-	2273	15	full-splice_match	LRRFIP2	ENST00000421276.6	2522	15	-7	256	-7	-256	multi-exon	FALSE	canonical	1	278383	junction_14	192362.32862275394	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	408	1682	50.0	-24	True	AAAAAG	-44
PB.5202.1	chr17	+	2671	12	novel_not_in_catalog	KPNA2	novel	2181	11	NA	NA	-7	843	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	876164.7591443326	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	137	1726	30.0	-7	True	ATTAAA	-22
PB.2716.3	chr12	+	6469	6	full-splice_match	SLC16A7	ENST00000547379.5	1969	6	-114	-4386	-37	4162	multi-exon	FALSE	canonical	1	54223	junction_3	8850.594352923425	NA	3	NA	TRUE	NA	NA	NA	C	coding	478	1437	337	1773	70.0	-50	True	NA	NA
PB.2716.2	chr12	+	2338	6	full-splice_match	SLC16A7	ENST00000547379.5	1969	6	-156	-213	-79	-11	multi-exon	FALSE	canonical	1	54223	junction_3	8850.594352923425	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	379	1815	70.0	-6515	False	AATAAA	-11
PB.2716.1	chr12	+	3834	6	full-splice_match	SLC16A7	ENST00000547379.5	1969	6	-64	-1801	13	1577	multi-exon	FALSE	canonical	1	54223	junction_3	8850.594352923425	NA	4	NA	TRUE	NA	NA	NA	C	coding	478	1437	287	1723	35.0	0	True	CATAAA	-23
PB.9073.1	chr4	-	2590	7	full-splice_match	HPGD	ENST00000296522.10	3027	7	382	55	-17	-55	multi-exon	FALSE	canonical	1	182351	junction_6	46983.86514686599	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	66	866	20.0	281	False	AATAAA	-17
PB.465.55	chr1	-	1667	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-14	1829	-1	0	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	101	1327	25.0	1	True	AATATA	-24
PB.465.54	chr1	-	1618	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	4	481	4	1	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	96	1277	25.0	22	False	AATATA	-25
PB.465.57	chr1	-	1599	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	21	5056	5	1	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	95	1258	25.0	23	False	AATATA	-25
PB.2716.4	chr12	+	3706	6	full-splice_match	SLC16A7	ENST00000547379.5	1969	6	-101	-1636	-24	1412	multi-exon	FALSE	canonical	1	54223	junction_3	8850.594352923425	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	324	1760	20.0	-37	True	AATAAA	-16
PB.787.10	chr1	-	3224	13	novel_in_catalog	PYGO2	novel	594	3	NA	NA	-10524	-2661	no_combination_of_known_junctions	FALSE	canonical	1	23455	junction_11	489685.499827497	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	350	1720	15.0	-2	True	ATTAAA	-16
PB.1745.2	chr11	+	5386	18	full-splice_match	PHRF1	ENST00000264555.9	5523	18	-18	155	-18	24	multi-exon	FALSE	canonical	1	139719	junction_1	91445.57825021159	NA	2	NA	TRUE	NA	NA	NA	C	coding	1649	4950	147	5096	30.0	-15	True	NA	NA
PB.279.2	chr1	-	4680	21	novel_not_in_catalog	KIAA0319L	novel	4789	21	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	2749	junction_20	99545.00949262851	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	129	3278	5.0	-1	True	ATTAAA	-18
PB.279.3	chr1	-	4165	21	full-splice_match	KIAA0319L	ENST00000325722.7	4789	21	10	614	0	1	multi-exon	FALSE	canonical	1	122800	junction_20	80586.38742467614	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	226	3375	100.0	-1	True	NA	NA
PB.279.4	chr1	-	4351	22	novel_not_in_catalog	KIAA0319L	novel	4789	21	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	4611	junction_6	127103.03362850613	NA	3	1	TRUE	NA	NA	NA	C	coding	848	2547	225	2771	100.0	0	True	NA	NA
PB.10673.18	chr7	-	2114	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	24	-673	24	247	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	461	1441	65.0	-2	True	AGTAAA	-39
PB.279.6	chr1	-	4122	22	novel_not_in_catalog	KIAA0319L	novel	4789	21	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	3128	junction_5	135628.20251233008	NA	1	NA	TRUE	NA	NA	NA	C	coding	848	2547	92	2638	100.0	236	False	NA	NA
PB.1745.3	chr11	+	4626	15	novel_not_in_catalog	PHRF1	novel	5178	18	NA	NA	-14	11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	108500.8083481597	NA	4	2	TRUE	NA	NA	NA	C	coding	1458	4377	143	4519	30.0	-11	True	NA	NA
PB.2675.3	chr12	+	1418	5	full-splice_match	COQ10A	ENST00000433805.6	1410	5	-10	2	-10	0	multi-exon	FALSE	canonical	1	53312	junction_1	86754.14362546321	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	124	771	25.0	-53	True	AATAAA	-14
PB.2675.2	chr12	+	1629	5	full-splice_match	COQ10A	ENST00000308197.9	1652	5	23	0	-9	0	multi-exon	FALSE	canonical	1	56747	junction_1	85559.01613944612	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	239	982	25.0	1	True	AATAAA	-14
PB.2675.1	chr12	+	2958	3	novel_in_catalog	COQ10A	novel	1652	5	NA	NA	-12	0	intron_retention	FALSE	canonical	1	56747	junction_1	116545.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-14
PB.10673.16	chr7	-	4466	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	22	-3023	22	2597	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	463	1443	75.0	-4	True	AAAACA	-11
PB.7289.7	chr20	+	5463	30	novel_not_in_catalog	RALGAPB	novel	8652	30	NA	NA	27	-178	any annotated donor/acceptor	FALSE	canonical	1	3378	junction_3	65680.61930418087	NA	0	NA	TRUE	NA	NA	NA	C	coding	1272	3819	797	4615	40.0	-4	True	ATTAAA	-18
PB.10673.13	chr7	-	6113	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	-22	-4626	-22	4200	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	507	1487	10.0	3	True	AATAAA	-17
PB.10673.12	chr7	-	6741	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	11	-5287	11	4861	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	474	1454	45.0	-15	True	AATAAA	-40
PB.1745.1	chr11	+	5564	18	full-splice_match	PHRF1	ENST00000264555.9	5523	18	-43	2	-43	-2	multi-exon	TRUE	canonical	1	139719	junction_1	91445.57825021159	NA	1	1	TRUE	NA	NA	NA	C	coding	1649	4950	172	5121	20.0	-3	True	NA	NA
PB.11380.2	chr8	-	1509	10	novel_in_catalog	TSTA3	novel	762	2	NA	NA	5	-1	intron_retention	FALSE	canonical	1	585073	junction_9	178760.1819269135	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	83	568	5.0	-6	True	AATAAA	-16
PB.8557.1	chr3	-	2348	1	full-splice_match	AC131235.4	ENST00000609288.1	620	1	-1722	-6	-1722	6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.11194.3	chr8	+	2996	11	novel_in_catalog	HNF4G	novel	470	5	NA	NA	-290	1054	combination_of_known_junctions	FALSE	canonical	1	11172	junction_1	7134.320983106942	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	485	1711	55.0	-6	True	AAAACA	-7
PB.7289.3	chr20	+	4917	31	novel_not_in_catalog	RALGAPB	novel	8652	30	NA	NA	18	-2	any annotated donor/acceptor	FALSE	canonical	1	9970	junction_4	76334.1372653517	NA	0	NA	TRUE	NA	NA	NA	C	coding	1372	4119	698	4816	35.0	-13	True	AATAAA	-15
PB.7289.2	chr20	+	5626	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	-14	-171	combination_of_known_junctions	FALSE	canonical	1	79320	junction_15	54142.83126898372	NA	1	1	TRUE	NA	NA	NA	C	coding	1490	4473	299	4771	50.0	-91	False	ATTAAA	-25
PB.8287.2	chr3	+	2432	16	full-splice_match	DZIP3	ENST00000479138.5	2076	16	-349	-7	1	7	multi-exon	FALSE	canonical	1	17737	junction_1	33761.282585562745	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	464	2431	25.0	-315	False	NA	NA
PB.11549.7	chr9	+	2864	7	novel_not_in_catalog	DCAF10	novel	3862	7	NA	NA	236	567	any annotated donor/acceptor	FALSE	canonical	1	21565	junction_6	45514.209553171415	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	78	1757	25.0	-7	True	AATAAA	-21
PB.8257.35	chr3	+	2124	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-10	344	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	153	1148	60.0	-6	True	NA	NA
PB.9731.1	chr6	-	3381	1	novel_in_catalog	C6orf52	novel	682	6	NA	NA	-23	-19830	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-28	True	NA	NA
PB.11553.1	chr9	+	2688	1	genic	FAM201A	novel	NA	NA	NA	NA	-119	18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	96	291	259	549	20.0	NA	False	NA	NA
PB.2455.2	chr12	-	4611	36	full-splice_match	A2M	ENST00000318602.11	4844	36	235	-2	-62	2	multi-exon	FALSE	canonical	1	958881	junction_32	595448.1588077762	NA	0	NA	TRUE	NA	NA	NA	A	coding	1474	4425	74	4498	0.0	-4	True	AATAAA	-19
PB.3656.17	chr14	+	4484	22	full-splice_match	PAPOLA	ENST00000216277.12	4519	22	39	-4	0	4	multi-exon	FALSE	canonical	1	516762	junction_12	274573.26895494247	NA	16	1	TRUE	NA	NA	NA	C	coding	745	2238	182	2419	15.0	22	True	AATAAA	-20
PB.8257.34	chr3	+	2691	13	novel_not_in_catalog	ST3GAL6	novel	804	5	NA	NA	-11	-309	any annotated donor/acceptor	FALSE	canonical	1	2966	junction_7	67246.63328416938	NA	7	NA	TRUE	NA	NA	NA	C	coding	187	564	944	1507	45.0	-7	True	TTTAAA	-7
PB.11380.4	chr8	-	2315	8	novel_in_catalog	TSTA3	novel	762	2	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	807000	junction_6	121245.3499967596	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	801	1286	10.0	26	True	AATAAA	-13
PB.4611.4	chr16	-	2973	12	full-splice_match	CBFA2T3	ENST00000268679.8	4477	12	237	1267	113	103	multi-exon	FALSE	canonical	1	29117	junction_11	39403.030931789624	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	161	2122	25.0	2189	False	AAAAAG	-23
PB.8434.4	chr3	+	3008	6	full-splice_match	PXYLP1	ENST00000286353.8	3281	6	5	268	4	-6	multi-exon	FALSE	canonical	1	49152	junction_1	33300.654524498466	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	133	1575	35.0	-9	True	AATAAA	-19
PB.11177.6	chr8	-	2617	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	164	4	134	-4	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	7	1131	25.0	238	False	AATAAA	-14
PB.6350.1	chr2	-	1276	6	full-splice_match	TP53I3	ENST00000335934.8	1635	6	357	2	323	0	multi-exon	FALSE	canonical	1	161260	junction_5	100753.40049923873	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	134	1132	20.0	3	True	AATAAA	-12
PB.6350.2	chr2	-	1700	5	full-splice_match	TP53I3	ENST00000238721.8	1998	5	298	0	298	0	multi-exon	FALSE	canonical	1	316224	junction_3	52725.68966061516	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	558	1556	20.0	319	False	AATAAA	-12
PB.6369.4	chr2	+	2391	11	full-splice_match	AGBL5	ENST00000323064.12	2382	11	-11	2	-1	-2	multi-exon	FALSE	canonical	1	147675	junction_1	83232.0033878796	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	174	2327	15.0	-1	True	AATAAA	-16
PB.4595.4	chr16	-	3689	10	novel_in_catalog	AC010531.1	novel	953	5	NA	NA	-49503	-26462	no_combination_of_known_junctions	FALSE	canonical	1	34714	junction_7	83034.9198657475	NA	0	NA	TRUE	NA	NA	NA	A	coding	568	1707	33	1739	20.0	-20	True	ATTAAA	-16
PB.4595.5	chr16	-	3493	9	full-splice_match	FBXO31	ENST00000311635.11	5934	9	-19	2460	-13	-111	multi-exon	FALSE	canonical	1	130958	junction_1	49233.565039354755	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	33	1652	20.0	-20	True	AATAAA	-24
PB.4595.6	chr16	-	2755	4	novel_not_in_catalog	FBXO31	novel	5934	9	NA	NA	-14	-11829	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	65523.840024494566	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	34	606	70.0	-21	True	NA	NA
PB.10211.15	chr6	-	3602	17	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	6923	junction_5	169124.8424491136	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	106	2349	20.0	-1	True	AATAAA	-15
PB.4595.1	chr16	-	2054	12	novel_in_catalog	C16orf95	novel	487	4	NA	NA	-66357	-3	no_combination_of_known_junctions	FALSE	canonical	1	7761	junction_4	86452.8232832965	NA	0	NA	TRUE	NA	NA	NA	A	coding	573	1722	34	1755	35.0	-21	True	AATAAA	-19
PB.4595.2	chr16	-	5968	9	full-splice_match	FBXO31	ENST00000311635.11	5934	9	-33	-1	-27	1	multi-exon	FALSE	canonical	1	130958	junction_1	49233.565039354755	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	47	1666	5.0	8275	False	AGTAAA	-18
PB.4595.3	chr16	-	3600	9	full-splice_match	FBXO31	ENST00000311635.11	5934	9	-16	2350	-10	-1	multi-exon	FALSE	canonical	1	130958	junction_1	49233.565039354755	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	30	1649	15.0	-17	True	ATTAAA	-17
PB.3456.3	chr14	-	3670	11	novel_not_in_catalog	ATG14	novel	4689	7	NA	NA	26	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	49021.76107617922	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	11	1489	15.0	-3	True	AATAAA	-13
PB.3456.2	chr14	-	3734	11	novel_not_in_catalog	ATG14	novel	4689	7	NA	NA	30	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	49021.76107617922	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	7	1485	15.0	1	True	AATAAA	-13
PB.3456.1	chr14	-	4714	10	full-splice_match	ATG14	ENST00000247178.5	4742	10	28	0	28	0	multi-exon	FALSE	canonical	1	104658	junction_5	29162.608927050725	NA	5	NA	TRUE	NA	NA	NA	C	coding	492	1479	9	1487	15.0	-1	True	AATAAA	-13
PB.3456.4	chr14	-	2206	9	novel_not_in_catalog	ATG14	novel	4689	7	NA	NA	30	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	42456.860651246636	NA	23	2	TRUE	NA	NA	NA	C	coding	363	1092	7	1098	15.0	1	True	AATAAA	-12
PB.7311.3	chr20	-	1735	6	novel_in_catalog	TOMM34	novel	2062	7	NA	NA	90	-89	no_combination_of_known_junctions	FALSE	canonical	1	66311	junction_2	267744.2374293796	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	64	636	20.0	-1	True	ATTAAA	-18
PB.7311.2	chr20	-	2900	5	novel_in_catalog	TOMM34	novel	2062	7	NA	NA	90	-89	intron_retention	FALSE	canonical	1	66311	junction_2	297176.46933377394	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	ATTAAA	-18
PB.7311.1	chr20	-	1883	7	full-splice_match	TOMM34	ENST00000372813.3	2062	7	90	89	90	-89	multi-exon	FALSE	canonical	1	404447	junction_6	160528.2828119567	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	64	993	20.0	-1	True	ATTAAA	-18
PB.9725.3	chr6	-	2009	2	incomplete-splice_match	EEF1E1	ENST00000507463.1	654	3	3	5627	3	1726	3prime_fragment	FALSE	canonical	1	763664	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	98	297	36	332	80.0	-18	True	NA	NA
PB.318.21	chr1	+	2871	13	novel_not_in_catalog	CAP1	novel	3105	13	NA	NA	46	-1	any annotated donor/acceptor	FALSE	canonical	1	3987	junction_1	603156.4186761072	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	329	1756	15.0	-599	False	AATAAA	-17
PB.318.20	chr1	+	3253	13	novel_in_catalog	CAP1	novel	3105	13	NA	NA	14	-1	intron_retention	FALSE	canonical	1	52305	junction_1	595333.0536331638	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	711	2138	15.0	0	True	AATAAA	-17
PB.3535.1	chr14	+	3135	16	incomplete-splice_match	PCNX1	ENST00000439984.7	6988	34	139310	-29	-911	-1	5prime_fragment	FALSE	canonical	1	131265	junction_2	77337.83621040006	NA	0	NA	TRUE	NA	NA	NA	A	coding	950	2853	71	2923	40.0	NA	False	AATAAA	-16
PB.1502.12	chr10	+	3988	9	full-splice_match	TSPAN14	ENST00000429989.7	16183	9	142	12053	-14	1435	multi-exon	FALSE	canonical	1	135973	junction_1	120947.92493614503	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	82	894	30.0	-2	True	AATGAA	-16
PB.11298.3	chr8	+	1834	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	1	-592	1	586	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	35	928	30.0	-12	True	AATAAA	-20
PB.12047.8	chrX	+	3341	26	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	810533.9817774296	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	197	1870	10.0	0	True	AATAAA	-15
PB.9439.3	chr5	-	1985	9	novel_in_catalog	IRF1	novel	3579	10	NA	NA	-4	22	combination_of_known_junctions	FALSE	canonical	1	18791	junction_3	262176.40820444614	NA	4	NA	TRUE	NA	NA	NA	B	coding	284	855	243	1097	40.0	-9	True	AGTAAA	-31
PB.11298.7	chr8	+	1988	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	13	-758	0	752	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	23	916	20.0	0	True	AATATA	-11
PB.8810.2	chr4	+	1309	1	full-splice_match	UTP3	ENST00000254803.3	2073	1	53	711	53	-711	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	387	1161	147	1307	75.0	0	True	AAAAAG	-44
PB.11298.5	chr8	+	4275	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	10	-3042	1	3036	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	26	919	35.0	-3	True	AATAAA	-22
PB.2711.1	chr12	-	1285	6	full-splice_match	METTL1	ENST00000324871.11	2066	6	669	112	-5	-1	multi-exon	FALSE	canonical	1	61034	junction_4	69834.71542835984	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	42	872	15.0	-20	True	NA	NA
PB.11177.9	chr8	-	2633	11	novel_not_in_catalog	TRAM1	novel	3394	11	NA	NA	110	-2	any annotated donor/acceptor	FALSE	canonical	1	6682	junction_10	712639.2984037647	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	321	1145	20.0	-3	True	AATAAA	-16
PB.11298.9	chr8	+	1955	1	novel_in_catalog	EMC2	novel	533	6	NA	NA	1	-10310	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.8810.3	chr4	+	2019	1	full-splice_match	UTP3	ENST00000254803.3	2073	1	55	-1	55	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	479	1440	145	1584	10.0	2	True	AATAAA	-23
PB.5135.17	chr17	-	2713	5	novel_not_in_catalog	AC015813.2	novel	2270	6	NA	NA	-31	-14464	intron_retention	FALSE	non_canonical	0	0	junction_1	960597.4135834689	NA	1	NA	TRUE	NA	NA	NA	B	coding	248	747	141	887	40.0	-54	True	AATAAA	-9
PB.3266.10	chr13	-	3178	9	novel_in_catalog	TUBGCP3	novel	3899	22	NA	NA	16	-3	intron_retention	FALSE	canonical	1	150653	junction_8	43055.49838798176	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	172	1020	40.0	-1	True	AATAAA	-18
PB.11177.8	chr8	-	3165	11	full-splice_match	TRAM1	ENST00000521425.5	3394	11	225	4	225	-4	multi-exon	FALSE	canonical	1	22040	junction_10	708972.4783690055	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	855	1679	25.0	890	False	AATAAA	-14
PB.8473.65	chr3	+	3543	3	incomplete-splice_match	MBNL1	ENST00000463374.5	5092	9	156583	24	-1425	-7	5prime_fragment	FALSE	canonical	1	957486	junction_1	157016.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-8822	False	AATAAA	-14
PB.3015.8	chr12	-	2614	8	novel_in_catalog	SLC15A4	novel	2779	8	NA	NA	-102	-1	combination_of_known_junctions	FALSE	canonical	1	22803	junction_6	136616.63277513586	NA	2	NA	TRUE	NA	NA	NA	B	coding	214	645	182	826	10.0	76	False	TATAAA	-22
PB.11968.7	chrX	+	4423	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-44	632	-44	-632	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	184	3333	30.0	-8	True	AGTAAA	-13
PB.3015.9	chr12	-	2508	9	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	12	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	161883.4715396676	NA	3	NA	TRUE	NA	NA	NA	B	coding	494	1485	29	1513	25.0	-14	True	TATAAA	-17
PB.11968.6	chrX	+	4552	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-11	470	-11	-470	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	151	3300	30.0	0	True	NA	NA
PB.11968.1	chrX	+	3631	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-20	1400	-20	-1400	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	160	3309	40.0	-9	False	ATTAAA	-17
PB.251.2	chr1	+	3062	11	full-splice_match	TXLNA	ENST00000373610.7	4854	11	27	1765	27	-1765	multi-exon	FALSE	canonical	1	274541	junction_1	118309.31834576683	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	97	1737	5.0	-30	True	CATAAA	-16
PB.251.3	chr1	+	4618	10	novel_in_catalog	TXLNA	novel	4854	11	NA	NA	34	-1	no_combination_of_known_junctions	FALSE	canonical	1	9890	junction_1	178129.4193896639	NA	36	1	TRUE	NA	NA	NA	C	coding	371	1116	414	1529	10.0	-23	True	AATAAA	-15
PB.9910.1	chr6	-	1094	5	full-splice_match	HLA-DMA	ENST00000374843.8	1123	5	25	4	11	-4	multi-exon	FALSE	canonical	1	792247	junction_4	246756.5990580343	NA	1	NA	TRUE	NA	NA	NA	A	coding	261	786	62	847	10.0	-47	True	AATAAA	-15
PB.251.6	chr1	+	5018	10	full-splice_match	TXLNA	ENST00000373609.1	5012	10	8	-14	8	14	multi-exon	FALSE	canonical	1	303429	junction_1	103081.14829385754	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	274	1914	10.0	-33	True	AATAAA	-30
PB.11968.3	chrX	+	4040	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-11	982	-11	-982	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	151	3300	85.0	0	True	NA	NA
PB.11.1	chr1	-	2288	10	novel_in_catalog	C1orf159	novel	2429	12	NA	NA	-4	0	intron_retention	TRUE	canonical	1	29762	junction_9	28597.040492218428	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	179	1213	5.0	-14	True	TATAAA	-21
PB.3015.5	chr12	-	2396	9	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	-20	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	137156.3822101778	NA	1	NA	TRUE	NA	NA	NA	B	coding	444	1335	61	1395	10.0	-46	True	TATAAA	-23
PB.251.8	chr1	+	2789	10	full-splice_match	TXLNA	ENST00000373609.1	5012	10	-14	2237	-14	-2237	multi-exon	FALSE	canonical	1	303429	junction_1	103081.14829385754	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	296	1936	20.0	-55	True	NA	NA
PB.11968.2	chrX	+	2882	3	full-splice_match	TLR7	ENST00000380659.3	5011	3	-83	2212	-83	-2212	multi-exon	FALSE	canonical	1	36275	junction_1	1707.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2658	223	2880	20.0	3	True	GATAAA	-25
PB.3015.6	chr12	-	2345	8	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	-155	0	any annotated donor/acceptor	FALSE	canonical	1	851	junction_7	142075.03549755903	NA	1	NA	TRUE	NA	NA	NA	B	coding	318	957	388	1344	10.0	-2	True	TATAAA	-23
PB.7420.1	chr20	+	4472	35	full-splice_match	RTEL1	ENST00000370018.7	4955	35	482	1	1	-1	multi-exon	TRUE	canonical	1	44022	junction_12	54051.560177476626	NA	0	NA	TRUE	NA	NA	NA	C	coding	1219	3660	346	4005	0.0	-23	True	AATAAA	-25
PB.2974.1	chr12	-	3318	1	novel_in_catalog	RHOF	novel	1219	5	NA	NA	2083	-2126	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	241	726	2053	2778	50.0	5329	False	AATAAA	-9
PB.3260.3	chr13	+	2648	10	novel_not_in_catalog	NAXD	novel	2311	7	NA	NA	58	-1	any annotated donor/acceptor	FALSE	canonical	1	1672	junction_7	88818.8443415745	NA	4	NA	TRUE	NA	NA	NA	C	coding	219	660	178	837	30.0	-59	False	ATTAAA	-19
PB.2974.2	chr12	-	2315	3	full-splice_match	LINC01089	ENST00000543167.5	1059	3	-543	-713	0	-10	multi-exon	FALSE	canonical	1	87996	junction_2	6035.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	115	348	1428	1775	50.0	-1	True	AATAAA	-9
PB.3260.6	chr13	+	3274	8	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-41	0	intron_retention	FALSE	canonical	1	200086	junction_4	37985.42303009814	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	1429	1809	30.0	-27	True	ATTAAA	-20
PB.3260.7	chr13	+	2261	8	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-36	-1	no_combination_of_known_junctions	FALSE	canonical	1	1676	junction_1	125025.44940784118	NA	2	1	TRUE	NA	NA	NA	C	coding	249	750	48	797	30.0	-22	True	ATTAAA	-19
PB.3260.4	chr13	+	2538	10	novel_not_in_catalog	NAXD	novel	2311	7	NA	NA	-46	1	any annotated donor/acceptor	FALSE	canonical	1	7984	junction_4	95278.5744762285	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	692	1072	25.0	-32	True	ATTAAA	-21
PB.3260.5	chr13	+	2116	6	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-46	-1	no_combination_of_known_junctions	FALSE	canonical	1	14828	junction_1	114354.3952166247	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	2	652	30.0	-32	True	ATTAAA	-19
PB.5135.19	chr17	-	2421	5	novel_not_in_catalog	AC015813.2	novel	2270	6	NA	NA	-14	-14464	intron_retention	FALSE	non_canonical	0	0	junction_1	960597.4135834689	NA	0	NA	TRUE	NA	NA	NA	B	coding	248	747	124	870	40.0	-37	True	AATAAA	-9
PB.3260.8	chr13	+	2860	10	novel_not_in_catalog	NAXD	novel	2311	7	NA	NA	-35	0	any annotated donor/acceptor	FALSE	canonical	1	8305	junction_7	86898.48623892872	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	140	757	30.0	-21	True	ATTAAA	-20
PB.3260.9	chr13	+	2494	10	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	1	200086	junction_4	47613.7156570107	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	132	1028	25.0	-13	True	ATTAAA	-21
PB.9472.3	chr5	+	3545	19	full-splice_match	KIF20A	ENST00000394894.7	3201	19	117	-461	-45	461	multi-exon	FALSE	canonical	1	290110	junction_1	51903.30691399176	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	110	2782	20.0	3	True	ATTAAA	-19
PB.9472.2	chr5	+	2839	18	novel_in_catalog	KIF20A	novel	631	5	NA	NA	-48	1	intron_retention	TRUE	canonical	1	20508	junction_15	103109.41951372215	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	113	2065	35.0	0	True	ATTAAA	-22
PB.5135.18	chr17	-	2485	3	incomplete-splice_match	SRSF1	ENST00000581979.5	1720	4	-44	-305	-3	-9	intron_retention	FALSE	canonical	1	544443	junction_1	571530.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-53	True	AATAAA	-9
PB.3015.2	chr12	-	2175	7	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	139	2	any annotated donor/acceptor	FALSE	canonical	1	3442	junction_6	177026.99277291648	NA	2	NA	TRUE	NA	NA	NA	B	coding	240	723	450	1172	5.0	574	False	TATAAA	-25
PB.5568.1	chr19	-	2641	3	incomplete-splice_match	GAMT	ENST00000447102.8	1769	5	47	643	-29	146	intron_retention	FALSE	canonical	1	1026204	junction_2	33590.5	NA	6	NA	TRUE	NA	NA	NA	A	coding	246	741	1679	2419	80.0	8	True	NA	NA
PB.3015.3	chr12	-	2348	9	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	15	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	137156.3822101778	NA	1	NA	TRUE	NA	NA	NA	B	coding	318	957	390	1346	5.0	-11	True	TATAAA	-24
PB.6633.25	chr2	-	4684	30	incomplete-splice_match	SNRNP200	ENST00000323853.9	7165	45	-29	10431	-29	48	3prime_fragment	FALSE	canonical	1	301678	junction_16	240201.30740899243	NA	0	NA	TRUE	NA	NA	NA	C	coding	1389	4170	108	4277	90.0	1	True	NA	NA
PB.6633.26	chr2	-	2172	16	incomplete-splice_match	SNRNP200	ENST00000323853.9	7165	45	-14	18716	-14	-8237	3prime_fragment	FALSE	canonical	1	301678	junction_2	242693.61008027292	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2079	93	2171	50.0	16	True	NA	NA
PB.2419.35	chr12	-	5186	34	incomplete-splice_match	CHD4	ENST00000645022.1	6673	40	131	8768	1	15	3prime_fragment	FALSE	canonical	1	448723	junction_31	309097.50427801587	NA	1	1	TRUE	NA	NA	NA	C	coding	1652	4956	231	5186	30.0	6128	False	AATAGA	-26
PB.6445.37	chr2	-	2624	14	full-splice_match	PREPL	ENST00000409957.5	4703	14	15	2064	0	0	multi-exon	FALSE	canonical	1	61660	junction_13	173175.49775751223	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	179	2095	35.0	1	True	AATAAA	-23
PB.2419.36	chr12	-	5184	34	incomplete-splice_match	CHD4	ENST00000544040.6	6582	40	48	8762	-9	15	3prime_fragment	FALSE	canonical	1	410925	junction_31	311550.8726002365	NA	0	NA	TRUE	NA	NA	NA	C	coding	1659	4977	208	5184	30.0	6151	False	AATAGA	-26
PB.2419.33	chr12	-	5165	34	incomplete-splice_match	CHD4	ENST00000646806.1	6359	40	-56	8662	7	15	3prime_fragment	FALSE	canonical	1	260697	junction_26	331276.94482350006	NA	0	NA	TRUE	NA	NA	NA	C	coding	1639	4917	249	5165	30.0	6110	False	AATAGA	-26
PB.2419.32	chr12	-	5025	33	incomplete-splice_match	CHD4	ENST00000645005.1	6175	40	982	8428	19	15	internal_fragment	FALSE	canonical	1	105517	junction_1	330381.57548076933	NA	22	1	TRUE	NA	NA	NA	C	coding	1661	4983	43	5025	30.0	7164	False	AATAGA	-26
PB.7631.1	chr22	+	4276	21	full-splice_match	LZTR1	ENST00000646124.1	4281	21	-5	10	-4	6	multi-exon	FALSE	canonical	1	122204	junction_14	81740.20708568092	NA	1	NA	TRUE	NA	NA	NA	A	coding	840	2523	80	2602	60.0	-4	True	AATAAA	-24
PB.7631.2	chr22	+	4229	22	novel_not_in_catalog	AC002470.2	novel	3442	22	NA	NA	2832	901	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	101960.414990562	NA	1	NA	TRUE	NA	NA	NA	B	coding	840	2523	79	2601	60.0	-3	True	AATAAA	-24
PB.7631.3	chr22	+	4240	21	novel_in_catalog	AC002470.2	novel	3442	22	NA	NA	2836	915	no_combination_of_known_junctions	FALSE	canonical	1	12900	junction_15	101773.67760127124	NA	2	NA	TRUE	NA	NA	NA	B	coding	825	2478	75	2552	25.0	1	True	AATAAA	-38
PB.2419.39	chr12	-	4987	33	incomplete-splice_match	CHD4	ENST00000645645.1	6297	40	912	8658	12	15	internal_fragment	FALSE	canonical	1	260697	junction_26	322225.56746826606	NA	0	NA	TRUE	NA	NA	NA	C	coding	1646	4938	50	4987	30.0	7157	False	AATAGA	-26
PB.2419.38	chr12	-	5055	34	novel_not_in_catalog	AC006064.6	novel	8502	55	NA	NA	778	-21914	any annotated donor/acceptor	FALSE	canonical	1	5220	junction_33	347332.3020058291	NA	0	NA	TRUE	NA	NA	NA	B	coding	1652	4956	100	5055	30.0	6990	False	AATAGA	-26
PB.822.2	chr1	+	2488	3	novel_in_catalog	TMEM79	novel	1947	5	NA	NA	-8	0	intron_retention	FALSE	canonical	1	52769	junction_1	36914.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	183	1034	0.0	-8	True	AATAAA	-13
PB.8889.5	chr4	-	2544	8	novel_not_in_catalog	EIF4E	novel	11523	7	NA	NA	0	1490	any annotated donor/acceptor	FALSE	canonical	1	14	junction_6	69312.03691117084	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	393	791	30.0	-1	True	AATAAA	-18
PB.11231.1	chr8	-	4279	3	full-splice_match	OTUD6B-AS1	ENST00000522817.1	4275	3	-2	-2	-2	2	multi-exon	FALSE	canonical	1	133668	junction_1	170448.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	1	True	NA	NA
PB.11679.9	chr9	-	1994	6	full-splice_match	TRIM14	ENST00000341469.6	4454	6	-22	2482	-8	1063	multi-exon	FALSE	canonical	1	177711	junction_1	40592.042326544746	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	33	1361	75.0	-1	True	NA	NA
PB.10958.2	chr8	-	5571	3	full-splice_match	RPL23AP53	ENST00000606975.1	736	3	-76	-4759	-56	4759	multi-exon	FALSE	canonical	1	7041	junction_1	7478.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	114	345	183	527	35.0	NA	False	NA	NA
PB.635.36	chr1	-	3503	19	full-splice_match	CSDE1	ENST00000339438.10	4006	19	-1	504	-1	-105	multi-exon	FALSE	canonical	1	1441617	junction_1	1263348.642629662	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	448	2751	80.0	-2	True	TTTAAA	-8
PB.25.1	chr1	-	2040	1	full-splice_match	AL691432.2	ENST00000607222.1	2038	1	-4	2	-4	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-15	True	AATAAA	-18
PB.6691.9	chr2	-	6285	47	novel_in_catalog	ANAPC1	novel	1536	12	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	279	junction_44	121809.21649077463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1784	5355	705	6059	30.0	-1	True	AATAAA	-18
PB.6691.8	chr2	-	6378	48	novel_not_in_catalog	ANAPC1	novel	1536	12	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	45	junction_2	120188.20447638608	NA	0	NA	TRUE	NA	NA	NA	C	coding	1948	5847	306	6152	30.0	0	True	AATAAA	-18
PB.6691.5	chr2	-	6460	48	novel_not_in_catalog	ANAPC1	novel	1536	12	NA	NA	-15	0	any annotated donor/acceptor	FALSE	canonical	1	1813	junction_22	121041.74192946103	NA	1	NA	TRUE	NA	NA	NA	C	coding	1846	5541	694	6234	30.0	-4	True	AATAAA	-18
PB.11244.5	chr8	+	3108	27	full-splice_match	INTS8	ENST00000523731.5	4633	27	-33	1558	-24	-126	multi-exon	FALSE	canonical	1	164843	junction_1	131912.53814568568	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2940	167	3106	50.0	-65	False	NA	NA
PB.6691.7	chr2	-	6393	49	novel_not_in_catalog	ANAPC1	novel	1536	12	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	15	junction_15	120360.92259260612	NA	4	NA	TRUE	NA	NA	NA	C	coding	1957	5874	294	6167	30.0	12	True	AATAAA	-18
PB.11244.7	chr8	+	3048	26	novel_in_catalog	INTS8	novel	735	6	NA	NA	-12	-2	no_combination_of_known_junctions	FALSE	canonical	1	1767	junction_16	154403.43856908884	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	155	2236	15.0	-18	True	AATAAA	-41
PB.6450.1	chr2	+	2562	5	full-splice_match	RHOQ	ENST00000238738.8	2975	5	413	0	-8	0	multi-exon	FALSE	canonical	1	130	junction_4	56131.408807257816	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	144	524	20.0	-322	False	AGTAAA	-23
PB.11244.1	chr8	+	3017	27	novel_in_catalog	INTS8	novel	735	6	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	5187	junction_1	145247.64069053638	NA	2	1	TRUE	NA	NA	NA	C	coding	886	2661	277	2937	35.0	-108	False	AATAAA	-30
PB.6691.3	chr2	-	6303	48	full-splice_match	ANAPC1	ENST00000341068.7	8262	48	509	1450	0	-22	multi-exon	FALSE	canonical	1	1813	junction_22	120117.30437350209	NA	1	NA	TRUE	NA	NA	NA	C	coding	1934	5805	295	6099	20.0	11	True	TATAAA	-26
PB.11244.3	chr8	+	3412	27	full-splice_match	INTS8	ENST00000523731.5	4633	27	-33	1254	-24	42	multi-exon	FALSE	canonical	1	164843	junction_1	131912.53814568568	NA	1	1	TRUE	NA	NA	NA	C	coding	995	2988	167	3154	20.0	-65	False	AATAAA	-24
PB.2946.8	chr12	-	5407	32	novel_not_in_catalog	GCN1	novel	8675	58	NA	NA	149	-66	any annotated donor/acceptor	FALSE	canonical	1	1136	junction_31	161544.31730602254	NA	0	NA	TRUE	NA	NA	NA	C	coding	1607	4824	4	4827	55.0	NA	False	AATAAA	-19
PB.2946.1	chr12	-	8618	58	full-splice_match	GCN1	ENST00000300648.6	8675	58	-5	62	-5	-62	multi-exon	FALSE	canonical	1	197792	junction_57	149225.2526892624	NA	0	NA	TRUE	NA	NA	NA	C	coding	2671	8016	19	8034	50.0	-7	True	AATAAA	-23
PB.5273.4	chr17	-	1906	8	novel_in_catalog	AC015802.6	novel	5654	2	NA	NA	-15380	-1668	no_combination_of_known_junctions	FALSE	canonical	1	11288	junction_7	47548.76313977524	NA	1	NA	TRUE	NA	NA	NA	B	coding	171	516	665	1180	30.0	1031	False	AATAAA	-14
PB.5273.5	chr17	-	1659	9	full-splice_match	ST6GALNAC2	ENST00000225276.9	2170	9	277	234	5	-234	multi-exon	FALSE	canonical	1	67378	junction_6	33132.8825970138	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	44	1168	35.0	6	True	AATAAA	-34
PB.5273.6	chr17	-	1731	9	novel_not_in_catalog	AC015802.6	novel	5654	2	NA	NA	-15313	-1913	any annotated donor/acceptor	FALSE	canonical	1	11288	junction_8	56931.83988496683	NA	1	NA	TRUE	NA	NA	NA	B	coding	80	243	598	840	45.0	0	True	AATAAA	-24
PB.11679.7	chr9	-	3981	6	full-splice_match	TRIM14	ENST00000341469.6	4454	6	-14	487	0	-487	multi-exon	FALSE	canonical	1	177711	junction_1	40592.042326544746	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	25	1353	30.0	7	True	NA	NA
PB.5273.1	chr17	-	2050	10	novel_not_in_catalog	AC015802.6	novel	5654	2	NA	NA	-15326	-1668	any annotated donor/acceptor	TRUE	canonical	1	13224	junction_5	48587.32215300612	NA	3	NA	TRUE	NA	NA	NA	B	coding	283	852	63	914	30.0	-13	True	AATAAA	-14
PB.5273.2	chr17	-	1976	9	novel_not_in_catalog	AC015802.6	novel	5654	2	NA	NA	-15362	-1668	any annotated donor/acceptor	FALSE	canonical	1	18515	junction_5	44077.774976277724	NA	2	NA	TRUE	NA	NA	NA	B	coding	171	516	735	1250	30.0	1049	False	AATAAA	-14
PB.5273.3	chr17	-	1887	9	full-splice_match	ST6GALNAC2	ENST00000225276.9	2170	9	283	0	11	0	multi-exon	FALSE	canonical	1	67378	junction_6	33132.8825970138	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	38	1162	30.0	12	True	AATAAA	-13
PB.10955.16	chr7	-	5255	28	novel_not_in_catalog	NCAPG2	novel	4134	30	NA	NA	1	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	113791.65198004828	NA	1	NA	TRUE	NA	NA	NA	C	coding	1128	3387	120	3506	5.0	-1	True	NA	NA
PB.11679.1	chr9	-	4475	6	full-splice_match	TRIM14	ENST00000341469.6	4454	6	-23	2	-9	-2	multi-exon	FALSE	canonical	1	177711	junction_1	40592.042326544746	NA	24	NA	TRUE	NA	NA	NA	C	coding	442	1329	34	1362	20.0	-2	True	AATAAA	-19
PB.1232.9	chr1	-	3202	2	full-splice_match	CHML	ENST00000638121.1	920	2	-1	-2281	-1	2220	multi-exon	FALSE	canonical	1	69411	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	682	2652	30.0	-4	True	AATAAA	-19
PB.11297.7	chr8	-	2997	6	full-splice_match	EIF3E	ENST00000521440.5	746	6	-28	-2223	-7	2223	multi-exon	FALSE	canonical	1	85153	junction_1	599694.913033419	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	25	543	40.0	-10	True	ATTAAA	-20
PB.11738.3	chr9	-	1435	3	full-splice_match	HDHD3	ENST00000485934.1	913	3	-62	-460	12	-9	multi-exon	FALSE	canonical	1	46554	junction_2	143946.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	509	1264	25.0	-2	True	AATAAA	-31
PB.10966.1	chr8	+	3800	1	incomplete-splice_match	KBTBD11	ENST00000320248.3	6710	2	29258	1	29258	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	114	345	3367	3711	10.0	-7993	False	AATAAA	-20
PB.1232.1	chr1	-	2220	3	full-splice_match	OPN3	ENST00000490673.5	1816	3	-10	-394	-4	-84	multi-exon	FALSE	canonical	1	85170	junction_2	70707.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	557	1000	25.0	3	True	AATAAA	-20
PB.1232.3	chr1	-	2413	6	novel_not_in_catalog	OPN3	novel	795	4	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	canonical	1	2604	junction_3	88793.71907381737	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	1072	1590	20.0	-1	True	NA	NA
PB.1232.2	chr1	-	2050	4	full-splice_match	OPN3	ENST00000366554.2	2620	4	81	489	60	-11	multi-exon	FALSE	canonical	1	112737	junction_2	50607.56641715413	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	27	1235	10.0	874	False	NA	NA
PB.1232.4	chr1	-	1791	3	full-splice_match	OPN3	ENST00000490673.5	1816	3	22	3	7	-3	multi-exon	FALSE	canonical	1	85170	junction_2	70707.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	525	968	20.0	-9	True	NA	NA
PB.1232.7	chr1	-	4281	1	novel_in_catalog	OPN3	novel	2620	4	NA	NA	7060	-31107	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	8004	False	AATAAA	-17
PB.9456.8	chr5	+	2639	10	novel_in_catalog	JADE2	novel	567	5	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	1	9316	junction_1	98815.81622392237	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	102	2483	10.0	1	True	AATATA	-18
PB.822.1	chr1	+	2214	4	full-splice_match	TMEM79	ENST00000295694.9	2191	4	-23	0	-10	0	multi-exon	FALSE	canonical	1	52769	junction_1	30156.953917057926	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	185	1369	0.0	-10	True	AATAAA	-13
PB.6507.4	chr2	-	4908	2	full-splice_match	SERTAD2	ENST00000313349.3	5549	2	0	641	0	-641	multi-exon	FALSE	canonical	1	136758	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	299	1243	95.0	-1	True	AATGAA	-41
PB.9634.2	chr5	-	898	5	full-splice_match	NOP16	ENST00000614830.4	1258	5	366	-6	-11	-2	multi-exon	FALSE	canonical	1	767039	junction_2	90701.68590081444	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	71	607	15.0	-12	True	AATAAA	-21
PB.10970.18	chr8	+	4191	1	novel_in_catalog	AGPAT5	novel	3685	8	NA	NA	-12338	-515	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-6565	False	AATAAA	-19
PB.6402.2	chr2	+	2477	14	full-splice_match	SLC30A6	ENST00000282587.9	5089	14	-23	2635	0	4	multi-exon	FALSE	canonical	1	91258	junction_1	29624.684274751322	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	61	1446	15.0	-1562	False	TTTAAA	-26
PB.3066.6	chr13	+	3002	12	full-splice_match	CDK8	ENST00000536792.5	3032	12	26	4	-9	-4	multi-exon	FALSE	canonical	1	7549	junction_4	68778.70916771308	NA	1	1	TRUE	NA	NA	NA	C	coding	206	621	1229	1849	35.0	1	True	AATAAA	-18
PB.3066.7	chr13	+	2928	13	full-splice_match	CDK8	ENST00000381527.7	3055	13	-9	136	-9	-76	multi-exon	FALSE	canonical	1	56454	junction_8	52865.822375233336	NA	2	1	TRUE	NA	NA	NA	C	coding	464	1395	513	1907	70.0	1	True	NA	NA
PB.3066.4	chr13	+	3030	13	novel_not_in_catalog	CDK8	novel	3032	12	NA	NA	-10	-5	any annotated donor/acceptor	FALSE	canonical	1	3068	junction_6	66980.5238527091	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	514	1878	35.0	0	True	AATAAA	-17
PB.3066.5	chr13	+	4173	13	novel_not_in_catalog	CDK8	novel	3032	12	NA	NA	-9	-4	any annotated donor/acceptor	FALSE	canonical	1	2179	junction_5	66972.65666108114	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	2145	3020	35.0	1	True	AATAAA	-18
PB.3066.2	chr13	+	3164	14	novel_not_in_catalog	CDK8	novel	3032	12	NA	NA	-33	-9	any annotated donor/acceptor	FALSE	canonical	1	1364	junction_1	74200.39217100783	NA	12	1	TRUE	NA	NA	NA	C	coding	404	1215	802	2016	50.0	-94	False	AATAAA	-13
PB.3066.3	chr13	+	3142	14	novel_not_in_catalog	CDK8	novel	3032	12	NA	NA	17	-3	any annotated donor/acceptor	FALSE	canonical	1	394	junction_5	74689.51720272619	NA	8	1	TRUE	NA	NA	NA	C	coding	305	918	1071	1988	30.0	-8	True	AATAAA	-19
PB.3066.1	chr13	+	2763	13	full-splice_match	CDK8	ENST00000381527.7	3055	13	288	4	288	-4	multi-exon	FALSE	canonical	1	56454	junction_8	52865.822375233336	NA	4	1	TRUE	NA	NA	NA	C	coding	464	1395	216	1610	35.0	262	False	AATAAA	-18
PB.661.3	chr1	+	3504	10	full-splice_match	SRGAP2C	ENST00000367123.7	7204	10	167	3533	166	1323	multi-exon	FALSE	canonical	0	0	junction_1	118681.22751937718	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	691	2070	30.0	NA	False	NA	NA
PB.3066.8	chr13	+	2957	12	novel_in_catalog	CDK8	novel	3032	12	NA	NA	19	-3	no_combination_of_known_junctions	FALSE	canonical	1	4916	junction_1	69176.74339659738	NA	7	1	TRUE	NA	NA	NA	C	coding	338	1017	787	1803	30.0	-7	True	AATAAA	-19
PB.8419.4	chr3	-	6068	33	novel_in_catalog	STAG1	novel	6055	34	NA	NA	-91	-7	no_combination_of_known_junctions	FALSE	canonical	1	12752	junction_31	55726.5661968315	NA	4	NA	TRUE	NA	NA	NA	C	coding	1161	3486	572	4057	30.0	-82	False	AATAAA	-7
PB.8419.7	chr3	-	4825	33	novel_in_catalog	STAG1	novel	6055	34	NA	NA	-13	-20	no_combination_of_known_junctions	FALSE	canonical	1	12752	junction_31	55726.5661968315	NA	2	NA	TRUE	NA	NA	NA	C	coding	1161	3486	494	3979	55.0	-4	False	AATAAA	-12
PB.11229.4	chr8	-	2385	5	novel_in_catalog	C8orf88	novel	894	6	NA	NA	35	1600	no_combination_of_known_junctions	FALSE	canonical	1	8701	junction_3	54312.08170092083	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6	True	ATTAAA	-15
PB.8419.1	chr3	-	6063	34	full-splice_match	STAG1	ENST00000383202.6	6055	34	-10	2	0	1	multi-exon	FALSE	canonical	1	147114	junction_30	42407.38547523074	NA	1	NA	TRUE	NA	NA	NA	C	coding	1258	3777	268	4044	15.0	-1	True	AATAAA	-15
PB.8419.3	chr3	-	6091	34	novel_not_in_catalog	STAG1	novel	6055	34	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	694	junction_23	55892.299937003256	NA	2	NA	TRUE	NA	NA	NA	C	coding	1268	3807	268	4074	15.0	-1	True	AATAAA	-13
PB.8419.2	chr3	-	5952	33	full-splice_match	STAG1	ENST00000236698.9	5951	33	0	-1	0	1	multi-exon	FALSE	canonical	1	4170	junction_3	48325.23478049376	NA	1	NA	TRUE	NA	NA	NA	C	coding	1221	3666	268	3933	15.0	-1	True	AATAAA	-15
PB.11229.3	chr8	-	2475	6	full-splice_match	C8orf88	ENST00000517562.2	894	6	19	-1600	19	1600	multi-exon	FALSE	canonical	1	94794	junction_5	23365.958945440267	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	152	505	15.0	-22	True	ATTAAA	-15
PB.8419.9	chr3	-	5031	34	full-splice_match	STAG1	ENST00000383202.6	6055	34	-151	1175	-116	-20	multi-exon	FALSE	canonical	1	147114	junction_30	42407.38547523074	NA	1	NA	TRUE	NA	NA	NA	C	coding	1258	3777	409	4185	55.0	-107	False	AATAAA	-12
PB.8419.8	chr3	-	4797	33	novel_in_catalog	STAG1	novel	6055	34	NA	NA	0	-20	no_combination_of_known_junctions	FALSE	canonical	1	1809	junction_11	56954.26966202249	NA	2	NA	TRUE	NA	NA	NA	C	coding	1227	3684	268	3951	55.0	-1	True	AATAAA	-12
PB.991.1	chr1	+	3039	7	full-splice_match	RNF2	ENST00000367510.7	3606	7	179	388	7	-388	multi-exon	FALSE	canonical	1	78096	junction_5	82980.27115659614	NA	2	NA	TRUE	NA	NA	NA	C	coding	336	1011	110	1120	25.0	-15	True	AATATA	-13
PB.2592.9	chr12	+	3359	14	novel_in_catalog	SPATS2	novel	675	6	NA	NA	-6	12	combination_of_known_junctions	FALSE	canonical	1	2422	junction_1	122091.43037186729	NA	3	NA	TRUE	NA	NA	NA	C	coding	545	1638	541	2178	25.0	0	True	AATAAA	-38
PB.11229.1	chr8	-	3270	6	full-splice_match	C8orf88	ENST00000517562.2	894	6	16	-2392	16	2392	multi-exon	FALSE	canonical	1	94794	junction_5	23365.958945440267	NA	3	NA	TRUE	NA	NA	NA	C	coding	117	354	155	508	20.0	-25	True	CATAAA	-20
PB.2592.8	chr12	+	3217	15	full-splice_match	SPATS2	ENST00000549412.5	2781	15	614	-1050	1	-4	multi-exon	FALSE	canonical	1	16087	junction_10	130663.88619100426	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	376	1263	20.0	9	True	AATAAA	-17
PB.10984.4	chr8	+	2554	5	full-splice_match	NEIL2	ENST00000284503.6	2671	5	116	1	116	0	multi-exon	FALSE	canonical	1	50151	junction_1	42589.28143030826	NA	3	NA	TRUE	NA	NA	NA	C	coding	332	999	484	1482	5.0	137	False	AATAAA	-17
PB.780.1	chr1	-	6590	15	full-splice_match	ADAR	ENST00000368474.9	6610	15	-16	36	-16	3	multi-exon	FALSE	canonical	1	265041	junction_14	298501.2048436355	NA	22	NA	TRUE	NA	NA	NA	C	coding	1226	3681	197	3877	85.0	-17	True	AATATA	-11
PB.10984.2	chr8	+	2129	5	full-splice_match	NEIL2	ENST00000436750.7	2226	5	98	-1	-2	0	multi-exon	FALSE	canonical	1	57273	junction_1	40827.02710215379	NA	2	NA	TRUE	NA	NA	NA	C	coding	332	999	58	1056	10.0	19	True	AATAAA	-18
PB.4252.5	chr16	-	3731	23	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	1	12343	junction_4	126780.58762133724	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	150	2471	5.0	-5	True	AATAAA	-22
PB.5142.3	chr17	-	5943	18	novel_in_catalog	MTMR4	novel	5622	18	NA	NA	25	-5	combination_of_known_junctions	FALSE	canonical	1	49581	junction_17	84676.10596582918	NA	34	1	TRUE	NA	NA	NA	C	coding	1209	3630	193	3822	5.0	8	True	AATAAA	-10
PB.5142.1	chr17	-	5862	19	full-splice_match	MTMR4	ENST00000323456.9	5839	19	-13	-10	-13	2	multi-exon	FALSE	canonical	1	49751	junction_17	95028.09390393681	NA	5	NA	TRUE	NA	NA	NA	C	coding	1195	3588	139	3726	10.0	9983	False	AATAAA	-25
PB.4252.6	chr16	-	3997	23	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	240	-3	any annotated donor/acceptor	FALSE	canonical	1	5082	junction_22	115764.40948229782	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	363	3278	15.0	840	False	AATAAA	-13
PB.5142.5	chr17	-	5911	20	novel_in_catalog	MTMR4	novel	5622	18	NA	NA	25	-3	combination_of_known_junctions	FALSE	canonical	1	4505	junction_17	112043.68692442127	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	193	3780	5.0	-1	True	AATAAA	-20
PB.5142.4	chr17	-	6037	18	novel_not_in_catalog	MTMR4	novel	5622	18	NA	NA	-42	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	104746.30632349393	NA	34	1	TRUE	NA	NA	NA	C	coding	853	2562	1345	3906	5.0	-43	True	AATAAA	-20
PB.3286.1	chr14	-	1488	7	full-splice_match	CCNB1IP1	ENST00000358932.8	1479	7	-11	2	4	-2	multi-exon	FALSE	canonical	1	96468	junction_5	281542.3208819294	NA	0	NA	TRUE	NA	NA	NA	A	coding	271	816	495	1310	20.0	10001	False	NA	NA
PB.6768.8	chr2	-	5480	11	novel_in_catalog	ZEB2	novel	1414	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	2150	junction_10	116403.68873540907	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	418	4047	40.0	1	True	AATAAA	-15
PB.11919.9	chr9	-	2247	10	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-3	1	intron_retention	FALSE	canonical	1	761972	junction_9	413392.0795835891	NA	25	1	TRUE	NA	NA	NA	C	coding	346	1041	1104	2144	10.0	7	True	AATAAA	-18
PB.655.8	chr1	-	8518	34	full-splice_match	NOTCH2	ENST00000256646.6	11389	34	-47	2918	-47	-2918	multi-exon	FALSE	canonical	1	6352	junction_32	113601.55284281708	NA	0	NA	TRUE	NA	NA	NA	C	coding	2471	7416	268	7683	25.0	-17	True	TATAAA	-11
PB.6889.4	chr2	+	2975	10	full-splice_match	ZC3H15	ENST00000337859.10	2138	10	104	-941	-3	941	multi-exon	FALSE	canonical	1	704317	junction_6	172084.8133266103	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	124	1404	85.0	0	True	NA	NA
PB.6889.5	chr2	+	1994	10	novel_in_catalog	ZC3H15	novel	2138	10	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	28625	junction_5	379847.0400042953	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	704	1369	30.0	0	True	AATAAA	-34
PB.6889.6	chr2	+	2812	10	full-splice_match	ZC3H15	ENST00000337859.10	2138	10	105	-779	-2	779	multi-exon	FALSE	canonical	1	704317	junction_6	172084.8133266103	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	123	1403	60.0	1	True	NA	NA
PB.6889.7	chr2	+	1883	10	full-splice_match	ZC3H15	ENST00000337859.10	2138	10	250	5	139	-5	multi-exon	FALSE	canonical	1	704317	junction_6	172084.8133266103	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	425	1258	30.0	-8860	False	AATAAA	-34
PB.6889.1	chr2	+	2221	5	incomplete-splice_match	ZC3H15	ENST00000337859.10	2138	10	101	5215	4	49	intron_retention	FALSE	canonical	1	977522	junction_1	85328.26297599172	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	127	705	80.0	-3	True	NA	NA
PB.6889.2	chr2	+	773	6	incomplete-splice_match	ZC3H15	ENST00000337859.10	2138	10	104	5216	-3	48	3prime_fragment	FALSE	canonical	1	977522	junction_1	77791.2163036419	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	648	124	771	75.0	0	True	NA	NA
PB.6889.3	chr2	+	6860	1	novel_in_catalog	ZC3H15	novel	2138	10	NA	NA	-3	-2200	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	8	27	348	374	80.0	0	True	NA	NA
PB.10955.17	chr7	-	4222	28	full-splice_match	NCAPG2	ENST00000409339.3	5253	28	32	999	32	-999	multi-exon	FALSE	canonical	1	24875	junction_1	111192.35279438336	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	83	3553	15.0	36	True	NA	NA
PB.6119.2	chr19	+	1580	12	full-splice_match	CYTH2	ENST00000452733.6	4780	12	275	2925	1	7	multi-exon	TRUE	canonical	1	286992	junction_8	267502.91762762005	NA	1	1	TRUE	NA	NA	NA	C	coding	399	1200	202	1401	10.0	-8413	False	NA	NA
PB.6119.3	chr19	+	3822	13	novel_in_catalog	AC008403.1	novel	443	4	NA	NA	3492	9883	intron_retention	FALSE	canonical	1	24949	junction_12	340732.088840338	NA	4	1	TRUE	NA	NA	NA	A	coding	399	1200	180	1379	25.0	-3	True	NA	NA
PB.6119.1	chr19	+	4504	12	full-splice_match	CYTH2	ENST00000452733.6	4780	12	275	1	1	0	multi-exon	FALSE	canonical	1	286992	junction_8	267502.91762762005	NA	3	NA	TRUE	NA	NA	NA	C	coding	399	1200	202	1401	30.0	-8413	False	NA	NA
PB.552.2	chr1	+	3516	24	novel_not_in_catalog	ABCD3	novel	527	6	NA	NA	-73	0	any annotated donor/acceptor	FALSE	canonical	1	5643	junction_1	123343.5245898452	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	98	2149	90.0	-10	True	NA	NA
PB.10806.10	chr7	-	2018	2	incomplete-splice_match	TSPAN12	ENST00000430985.1	693	5	268	16354	189	-16354	internal_fragment	FALSE	canonical	1	115174	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	34	105	249	353	45.0	2	True	AATAAA	-14
PB.4999.1	chr17	+	1596	11	full-splice_match	TUBG1	ENST00000251413.7	1611	11	17	-2	4	2	multi-exon	TRUE	canonical	1	406714	junction_9	257882.98231957844	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	46	1401	30.0	7	True	AATAAA	-17
PB.4999.2	chr17	+	1981	9	novel_in_catalog	TUBG1	novel	1611	11	NA	NA	-24	2	intron_retention	FALSE	canonical	1	461311	junction_2	253300.90474470158	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	87	1388	30.0	-34	True	AATAAA	-17
PB.552.3	chr1	+	3594	23	full-splice_match	ABCD3	ENST00000370214.8	3538	23	-57	1	-57	-1	multi-exon	FALSE	canonical	1	189028	junction_1	82104.51157338764	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	82	2061	20.0	6	True	AATAAA	-17
PB.7246.2	chr20	+	1652	8	novel_in_catalog	RALY	novel	6430	9	NA	NA	-6	-12	no_combination_of_known_junctions	FALSE	canonical	1	97168	junction_1	923260.25227741	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	426	1298	25.0	-360	False	AATAAA	-14
PB.7246.3	chr20	+	3301	10	novel_not_in_catalog	RALY	novel	6430	9	NA	NA	62	-1685	any annotated donor/acceptor	FALSE	canonical	1	9090	junction_9	735424.4405605027	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	361	1281	10.0	2	True	NA	NA
PB.7246.1	chr20	+	1440	10	full-splice_match	RALY	ENST00000246194.7	1789	10	337	12	106	-12	multi-exon	FALSE	canonical	1	1148860	junction_5	422175.63624891103	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	166	1086	25.0	6	True	AATAAA	-14
PB.7246.6	chr20	+	1549	9	full-splice_match	RALY	ENST00000375114.7	6430	9	265	4616	-42	-3	multi-exon	FALSE	canonical	1	401672	junction_4	646498.5343399738	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	314	1186	15.0	0	True	AATAAA	-23
PB.7246.4	chr20	+	1506	9	novel_in_catalog	RALY	novel	6430	9	NA	NA	-42	-11	no_combination_of_known_junctions	FALSE	canonical	1	97168	junction_1	753993.4195910528	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	231	1151	20.0	0	True	AATAAA	-15
PB.7246.5	chr20	+	3679	9	novel_in_catalog	RALY	novel	6430	9	NA	NA	25	-12	intron_retention	FALSE	canonical	1	1533831	junction_1	316914.9923981735	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	398	778	25.0	-249	False	AATAAA	-14
PB.991.2	chr1	+	2991	6	full-splice_match	RNF2	ENST00000367509.8	1677	6	-197	-1117	-35	-434	multi-exon	FALSE	canonical	1	11235	junction_3	55173.997638017856	NA	3	NA	TRUE	NA	NA	NA	C	coding	264	795	324	1118	30.0	1	True	TATAAA	-15
PB.552.1	chr1	+	3335	23	full-splice_match	ABCD3	ENST00000370214.8	3538	23	-7	210	-7	-43	multi-exon	FALSE	canonical	1	189028	junction_1	82104.51157338764	NA	3	NA	TRUE	NA	NA	NA	C	coding	659	1980	32	2011	20.0	5	True	AGTAAA	-44
PB.528.3	chr1	+	3025	6	novel_in_catalog	LRRC8B	novel	763	6	NA	NA	0	747	intron_retention	FALSE	canonical	1	8204	junction_1	27165.656514062015	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	467	2653	40.0	-2	True	AATAAA	-16
PB.8005.1	chr3	-	7110	36	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	-41	0	no_combination_of_known_junctions	FALSE	canonical	1	69239	junction_12	94906.36059067993	NA	1	1	TRUE	NA	NA	NA	C	coding	1491	4476	253	4728	30.0	-15	True	ATTAAA	-20
PB.9768.11	chr6	+	3577	16	novel_not_in_catalog	KDM1B	novel	496	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	70603.11345939356	NA	3	1	TRUE	NA	NA	NA	B	coding	262	789	185	973	20.0	23	True	AATAAA	-20
PB.9768.10	chr6	+	4391	22	novel_not_in_catalog	KDM1B	novel	496	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	63617.525915184415	NA	5	1	TRUE	NA	NA	NA	B	coding	652	1959	572	2530	20.0	22	True	AATAAA	-20
PB.9768.12	chr6	+	5155	22	novel_in_catalog	KDM1B	novel	496	4	NA	NA	3	643	combination_of_known_junctions	FALSE	canonical	1	50812	junction_1	52657.938504870915	NA	10	1	TRUE	NA	NA	NA	B	coding	822	2469	183	2651	40.0	25	True	AATAAA	-30
PB.3703.2	chr14	-	3563	5	full-splice_match	NUDT14	ENST00000551024.5	1042	5	27	-2548	7	-1	multi-exon	FALSE	canonical	1	19466	junction_1	114515.26060966721	NA	1	NA	TRUE	NA	NA	NA	A	coding	149	450	88	537	5.0	15	True	AATAAA	-16
PB.3703.3	chr14	-	3360	6	novel_in_catalog	AL512356.1	novel	535	5	NA	NA	-118	-20746	no_combination_of_known_junctions	FALSE	canonical	1	6155	junction_1	123611.72020710657	NA	3	NA	TRUE	NA	NA	NA	A	coding	149	450	104	553	5.0	-1	True	AATAAA	-16
PB.3703.1	chr14	-	4437	25	novel_in_catalog	JAG2	novel	5835	26	NA	NA	-12486	15	no_combination_of_known_junctions	TRUE	canonical	1	683	junction_24	47632.31469984353	NA	1	NA	TRUE	NA	NA	NA	A	coding	1126	3381	102	3482	5.0	1	True	ATTAAA	-37
PB.6105.1	chr19	+	2321	2	full-splice_match	C5AR1	ENST00000355085.3	2311	2	-13	3	-13	-3	multi-exon	FALSE	canonical	1	188909	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	350	1053	36	1088	25.0	0	True	AATAAA	-12
PB.8130.10	chr3	+	2912	17	novel_not_in_catalog	SEMA3B	novel	934	7	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	11417	junction_13	91264.992127471	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	75	1574	10.0	-4	True	AATAAA	-44
PB.528.4	chr1	+	2986	6	full-splice_match	LRRC8B	ENST00000330947.6	7593	6	-36	4643	13	-4627	multi-exon	FALSE	canonical	1	16390	junction_1	20954.509973750282	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	397	2808	40.0	11	True	NA	NA
PB.991.5	chr1	+	4727	7	full-splice_match	RNF2	ENST00000367510.7	3606	7	33	-1154	33	1154	multi-exon	FALSE	canonical	1	78096	junction_5	82980.27115659614	NA	5	NA	TRUE	NA	NA	NA	C	coding	336	1011	256	1266	30.0	-191	False	NA	NA
PB.528.6	chr1	+	3162	6	novel_not_in_catalog	LRRC8B	novel	763	6	NA	NA	280	-4471	intron_retention	FALSE	canonical	1	2336	junction_1	25644.781125211422	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	417	2828	80.0	287	False	NA	NA
PB.11505.1	chr9	-	4737	26	full-splice_match	NOL6	ENST00000297990.8	4741	26	11	-7	11	-4	multi-exon	TRUE	canonical	1	220949	junction_19	49827.92428646411	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3441	78	3518	5.0	-22	True	NA	NA
PB.6772.16	chr2	-	3022	14	novel_in_catalog	ORC4	novel	6472	13	NA	NA	0	1049	combination_of_known_junctions	FALSE	canonical	1	14457	junction_1	123571.29114495312	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	149	1531	20.0	-3	True	AATAAA	-18
PB.3149.38	chr13	-	2203	13	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	8	-13477	no_combination_of_known_junctions	FALSE	canonical	1	8313	junction_12	147178.16702601948	NA	0	NA	TRUE	NA	NA	NA	B	coding	699	2097	106	2202	70.0	-11	True	NA	NA
PB.3149.39	chr13	-	2486	13	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	22	-13477	combination_of_known_junctions	FALSE	canonical	1	24494	junction_12	140975.04293067465	NA	0	NA	TRUE	NA	NA	NA	B	coding	699	2097	389	2485	70.0	3	True	NA	NA
PB.10744.8	chr7	-	2694	18	novel_in_catalog	PLOD3	novel	1098	7	NA	NA	90	-10	combination_of_known_junctions	FALSE	canonical	1	12467	junction_10	246590.05044107695	NA	2	1	TRUE	NA	NA	NA	C	coding	696	2091	310	2400	20.0	-3	True	AATAAA	-11
PB.10744.9	chr7	-	2743	20	novel_not_in_catalog	PLOD3	novel	1098	7	NA	NA	240	-9	any annotated donor/acceptor	FALSE	canonical	1	2126	junction_7	280779.48203194514	NA	2	NA	TRUE	NA	NA	NA	C	coding	762	2289	160	2448	20.0	-19	True	AATAAA	-12
PB.3149.32	chr13	-	2574	13	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-13419	any annotated donor/acceptor	FALSE	canonical	1	33417	junction_1	150397.90391849345	NA	1	NA	TRUE	NA	NA	NA	B	coding	746	2238	335	2572	50.0	-1	True	NA	NA
PB.3149.33	chr13	-	2486	12	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-13423	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_11	106213.05605618072	NA	0	NA	TRUE	NA	NA	NA	B	coding	717	2151	335	2485	65.0	-1	True	NA	NA
PB.3149.30	chr13	-	2735	12	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	21	-13171	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_11	106213.05605618072	NA	0	NA	TRUE	NA	NA	NA	B	coding	801	2403	332	2734	50.0	2	True	NA	NA
PB.3149.31	chr13	-	2644	13	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-13323	combination_of_known_junctions	FALSE	canonical	1	24494	junction_12	140975.04293067465	NA	0	NA	TRUE	NA	NA	NA	B	coding	750	2250	393	2642	60.0	-1	True	NA	NA
PB.3149.36	chr13	-	2537	13	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	19	-13429	combination_of_known_junctions	FALSE	canonical	1	24494	junction_12	140975.04293067465	NA	1	NA	TRUE	NA	NA	NA	B	coding	715	2145	392	2536	65.0	0	True	NA	NA
PB.10744.3	chr7	-	2682	20	novel_not_in_catalog	PLOD3	novel	1098	7	NA	NA	65	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	238252.98675224546	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	452	2380	15.0	-28	True	AATAAA	-19
PB.3149.34	chr13	-	2306	12	incomplete-splice_match	ZC3H13	ENST00000282007.7	6412	17	-23	13363	-23	-13363	3prime_fragment	FALSE	canonical	1	43285	junction_11	111323.02920950438	NA	0	NA	TRUE	NA	NA	NA	B	coding	737	2211	95	2305	50.0	5589	False	NA	NA
PB.3149.35	chr13	-	2401	13	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	762	-13340	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	159189.22993151107	NA	3	NA	TRUE	NA	NA	NA	B	coding	773	2319	83	2401	55.0	6448	False	NA	NA
PB.11791.22	chr9	-	1870	10	full-splice_match	MAPKAP1	ENST00000394063.5	2977	10	27	1080	-4	-5	multi-exon	FALSE	canonical	1	28457	junction_9	289613.6277955319	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	480	1457	20.0	0	True	AATAAA	-14
PB.11791.23	chr9	-	1870	10	novel_in_catalog	MAPKAP1	novel	3252	11	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	1	48274	junction_9	301740.1051951992	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	588	1457	20.0	-18	True	AATAAA	-14
PB.11791.20	chr9	-	1961	11	full-splice_match	MAPKAP1	ENST00000373503.7	3045	11	5	1079	-4	-4	multi-exon	FALSE	canonical	1	48274	junction_10	270016.0427610923	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	570	1547	25.0	0	True	AATAAA	-15
PB.11791.21	chr9	-	2194	11	full-splice_match	MAPKAP1	ENST00000350766.7	3256	11	-18	1080	-9	-5	multi-exon	FALSE	canonical	1	337009	junction_4	196098.99032886425	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	321	1781	20.0	-14	True	AATAAA	-14
PB.6979.12	chr2	+	3900	3	incomplete-splice_match	PIKFYVE	ENST00000264380.8	9901	42	87629	1	19524	-1	5prime_fragment	FALSE	canonical	1	249812	junction_2	5554.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	102	455	20.0	-6046	False	AATAAA	-37
PB.11791.24	chr9	-	1577	8	full-splice_match	MAPKAP1	ENST00000394060.7	1586	8	5	4	5	-4	multi-exon	FALSE	canonical	1	68936	junction_1	266568.93769039883	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	326	1297	30.0	-19	True	AATAAA	-18
PB.9371.12	chr5	+	5777	31	full-splice_match	PPIP5K2	ENST00000358359.7	5813	31	35	1	35	-1	multi-exon	FALSE	canonical	1	40589	junction_2	101076.46052064854	NA	1	NA	TRUE	NA	NA	NA	C	coding	1243	3732	475	4206	50.0	-2	True	ATTAAA	-14
PB.8805.11	chr4	-	5294	32	novel_in_catalog	UBA6	novel	9564	33	NA	NA	-3	2045	no_combination_of_known_junctions	FALSE	canonical	1	7880	junction_15	77911.44739257134	NA	1	NA	TRUE	NA	NA	NA	C	coding	1026	3081	27	3107	40.0	2	True	AATAAA	-11
PB.8092.11	chr3	-	2953	5	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1768	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	100802.62053389287	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	94	432	45.0	-3	True	AATAAA	-9
PB.8092.14	chr3	-	5254	16	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1766	-9	intron_retention	FALSE	canonical	1	2391	junction_14	88310.9193025541	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	1631	2677	45.0	-1	True	AATAAA	-9
PB.2728.10	chr12	+	3436	5	novel_not_in_catalog	RASSF3	novel	1060	6	NA	NA	1670	0	any annotated donor/acceptor	FALSE	canonical	1	715	junction_1	171528.93625275008	NA	5	NA	TRUE	NA	NA	NA	C	coding	168	507	275	781	15.0	-8135	False	ATTAAA	-18
PB.8092.16	chr3	-	5231	17	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1769	-9	intron_retention	FALSE	canonical	1	2456	junction_5	93984.07613161125	NA	1	1	TRUE	NA	NA	NA	C	coding	237	714	2237	2950	45.0	-4	True	AATAAA	-9
PB.8092.17	chr3	-	5127	16	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1769	-9	intron_retention	FALSE	canonical	1	6164	junction_15	85195.69019449022	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	2237	3073	45.0	-4	True	AATAAA	-9
PB.8092.19	chr3	-	4999	15	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1769	-9	intron_retention	FALSE	canonical	1	6164	junction_14	71743.74136911007	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	1530	2945	45.0	-4	True	AATAAA	-9
PB.2213.10	chr11	-	3928	2	full-splice_match	CTSC	ENST00000534131.1	583	2	-4	-3341	0	3341	multi-exon	FALSE	canonical	1	1353925	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	127	384	69	452	15.0	-5	True	NA	NA
PB.7232.6	chr20	+	3082	8	novel_not_in_catalog	POFUT1	novel	5235	7	NA	NA	-12	-147	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	115836.21903835623	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	75	1241	65.0	-22	True	AATAAA	-18
PB.6768.9	chr2	-	5385	11	novel_in_catalog	ZEB2	novel	1414	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	2617	junction_8	114955.3373856125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	644	3952	40.0	-1	True	AATAAA	-15
PB.6414.15	chr2	-	3930	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	80	0	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	145	1800	65.0	14	True	AAAAAG	-20
PB.780.7	chr1	-	6943	14	novel_in_catalog	ADAR	novel	6610	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	262111	junction_13	298225.8862702375	NA	4	NA	TRUE	NA	NA	NA	C	coding	812	2439	996	3434	30.0	-12	True	AATAAA	-25
PB.9032.15	chr4	+	3763	12	full-splice_match	TRIM2	ENST00000338700.9	6735	12	-1	2973	-1	-15	multi-exon	FALSE	canonical	1	41081	junction_1	59920.44117048969	NA	29	2	TRUE	NA	NA	NA	C	coding	771	2316	67	2382	95.0	18	True	NA	NA
PB.8805.19	chr4	-	4913	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	16	4635	-10	1568	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	1	NA	TRUE	NA	NA	NA	C	coding	1052	3159	45	3203	30.0	-16	True	AATAAA	-12
PB.6391.8	chr2	+	3362	17	novel_in_catalog	WDR43	novel	3533	18	NA	NA	25	-8	no_combination_of_known_junctions	FALSE	canonical	1	5178	junction_1	193875.6015061188	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	32	1927	10.0	-22	True	AATAAA	-12
PB.6391.9	chr2	+	2179	17	novel_in_catalog	WDR43	novel	3533	18	NA	NA	25	327	no_combination_of_known_junctions	FALSE	canonical	1	4213	junction_5	193549.44492242116	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	961	1962	25.0	-22	True	AATAAA	-21
PB.4879.1	chr17	+	989	9	novel_not_in_catalog	GOSR1	novel	6039	9	NA	NA	-9	0	any annotated donor/acceptor	TRUE	canonical	1	1482	junction_6	161976.14167674317	NA	0	NA	TRUE	NA	NA	NA	B	coding	301	906	27	932	80.0	-15	True	NA	NA
PB.9032.14	chr4	+	2438	10	novel_in_catalog	TRIM2	novel	583	4	NA	NA	0	-1026	combination_of_known_junctions	FALSE	canonical	1	6833	junction_3	87519.27736571689	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	167	2068	80.0	-1	True	NA	NA
PB.10659.1	chr7	-	2263	1	antisense	novelGene_CDK14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	109	330	1764	2093	95.0	NA	False	NA	NA
PB.6893.3	chr2	-	4034	10	novel_in_catalog	TFPI	novel	3649	8	NA	NA	-2	-6	no_combination_of_known_junctions	FALSE	canonical	1	9109	junction_8	271969.80916207284	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	432	1334	25.0	18	False	AGTAAA	-18
PB.6893.2	chr2	-	4000	9	novel_in_catalog	TFPI	novel	3649	8	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	56512	junction_7	253280.41359130866	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	395	1297	20.0	-23	True	AGTAAA	-21
PB.9032.13	chr4	+	3888	13	novel_not_in_catalog	TRIM2	novel	583	4	NA	NA	-3	-13	any annotated donor/acceptor	FALSE	canonical	1	2164	junction_4	94151.1114091405	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	646	2505	95.0	-4	True	NA	NA
PB.6391.2	chr2	+	2728	18	full-splice_match	WDR43	ENST00000407426.7	3533	18	6	799	6	754	multi-exon	FALSE	canonical	1	419891	junction_6	129950.9957138888	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	51	2084	70.0	-41	False	NA	NA
PB.6391.3	chr2	+	3600	19	novel_not_in_catalog	WDR43	novel	3533	18	NA	NA	21	-4	any annotated donor/acceptor	FALSE	canonical	1	10986	junction_12	226090.47292665968	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	36	1532	15.0	-26	True	AATAAA	-16
PB.6391.4	chr2	+	1385	11	incomplete-splice_match	WDR43	ENST00000407426.7	3533	18	22	18598	22	3139	3prime_fragment	FALSE	canonical	1	419891	junction_6	106104.76601453866	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1350	35	1384	55.0	-25	True	NA	NA
PB.6391.5	chr2	+	2158	18	full-splice_match	WDR43	ENST00000407426.7	3533	18	150	1225	150	328	multi-exon	FALSE	canonical	1	419891	junction_6	129950.9957138888	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	174	1940	25.0	103	False	AATAAA	-22
PB.6391.6	chr2	+	4028	1	novel_in_catalog	WDR43	novel	3533	18	NA	NA	25	-3409	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	137	414	32	445	85.0	-22	True	NA	NA
PB.9032.12	chr4	+	7556	13	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	1854	junction_1	79663.47774004652	NA	9	1	TRUE	NA	NA	NA	C	coding	744	2235	972	3206	35.0	-9	True	AATAAA	-14
PB.4452.2	chr16	+	1771	9	full-splice_match	POLR2C	ENST00000219252.9	2057	9	284	2	2	-2	multi-exon	FALSE	canonical	1	771736	junction_1	106874.9762324535	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	55	882	10.0	-8	True	AATAAA	-17
PB.4452.3	chr16	+	1460	9	full-splice_match	POLR2C	ENST00000219252.9	2057	9	283	314	1	-314	multi-exon	FALSE	canonical	1	771736	junction_1	106874.9762324535	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	56	883	30.0	-9	True	AATAAA	-30
PB.4452.1	chr16	+	1865	9	novel_not_in_catalog	AC009052.1	novel	298	2	NA	NA	1583	9272	any annotated donor/acceptor	FALSE	canonical	1	242	junction_7	307365.3477127983	NA	10	1	TRUE	NA	NA	NA	A	coding	216	651	88	738	15.0	-41	True	AATAAA	-18
PB.9032.11	chr4	+	5175	12	full-splice_match	TRIM2	ENST00000338700.9	6735	12	-28	1588	-8	1370	multi-exon	FALSE	canonical	1	41081	junction_1	59920.44117048969	NA	1	NA	TRUE	NA	NA	NA	C	coding	771	2316	94	2409	20.0	-9	True	ATTAAA	-23
PB.978.6	chr1	+	2397	13	novel_not_in_catalog	NPL	novel	2144	13	NA	NA	1	8	any annotated donor/acceptor	FALSE	canonical	1	11291	junction_1	30116.7673356554	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	203	1165	40.0	1	True	AATAAA	-27
PB.978.7	chr1	+	2500	12	novel_in_catalog	NPL	novel	2144	13	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	15182	junction_5	41789.54759504279	NA	2	NA	TRUE	NA	NA	NA	B	coding	211	636	459	1094	50.0	2	True	AATAAA	-16
PB.978.4	chr1	+	2203	12	novel_in_catalog	NPL	novel	2144	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	15658	junction_10	35518.53048506063	NA	0	NA	TRUE	NA	NA	NA	B	coding	230	693	105	797	50.0	0	True	AATAAA	-16
PB.9032.10	chr4	+	2963	17	novel_in_catalog	TRIM2	novel	583	4	NA	NA	-8	75677	no_combination_of_known_junctions	FALSE	canonical	1	2226	junction_11	94669.54059483705	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	172	2823	10.0	-9	True	AATAAA	-14
PB.978.2	chr1	+	2558	11	novel_not_in_catalog	NPL	novel	2144	13	NA	NA	0	8	any annotated donor/acceptor	FALSE	canonical	1	3673	junction_1	41827.86382556489	NA	0	NA	TRUE	NA	NA	NA	B	coding	301	906	421	1326	40.0	0	True	AATAAA	-27
PB.978.3	chr1	+	2288	13	novel_in_catalog	NPL	novel	2144	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	29922	junction_1	25805.088207749304	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	963	105	1067	50.0	0	True	AATAAA	-16
PB.9269.4	chr5	+	2715	17	novel_in_catalog	RAD17	novel	464	5	NA	NA	-13	0	intron_retention	FALSE	canonical	1	5839	junction_3	57860.73248758609	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	454	2208	10.0	-25	True	ATTAAA	-12
PB.10645.8	chr7	+	3965	20	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	1	-3	combination_of_known_junctions	TRUE	canonical	1	13132	junction_2	132924.92752400943	NA	2	NA	TRUE	NA	NA	NA	C	coding	760	2283	494	2776	30.0	-26	True	AATAAA	-21
PB.10645.9	chr7	+	3609	17	full-splice_match	DMTF1	ENST00000432937.6	2411	17	-41	-1157	1	0	multi-exon	FALSE	canonical	1	6742	junction_2	120025.96481697656	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	408	2426	30.0	-26	True	AATAAA	-15
PB.10645.6	chr7	+	3873	19	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	24375	junction_1	119105.82219792805	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	401	2683	30.0	-27	True	AATAAA	-22
PB.10645.7	chr7	+	3550	18	full-splice_match	DMTF1	ENST00000331242.11	3801	18	65	186	0	7	multi-exon	FALSE	canonical	1	111224	junction_1	88764.68990488298	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	262	2544	60.0	-27	True	AATGAA	-22
PB.4394.11	chr16	+	2817	2	novel_not_in_catalog	FUS	novel	5119	15	NA	NA	4	-79	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-8169	False	NA	NA
PB.4394.10	chr16	+	2977	13	novel_in_catalog	FUS	novel	5119	15	NA	NA	3	1	intron_retention	FALSE	canonical	1	89793	junction_5	1894048.0164550492	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	1847	2812	10.0	3	True	ATTAAA	-18
PB.10645.2	chr7	+	3612	17	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	77976	junction_16	108843.99136120238	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	285	2411	30.0	-379	False	AATAAA	-22
PB.10645.3	chr7	+	3742	18	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	24375	junction_1	132254.09389782065	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	422	2548	30.0	-377	False	AATAAA	-15
PB.4394.14	chr16	+	3632	7	novel_in_catalog	FUS	novel	5119	15	NA	NA	904	-1	intron_retention	FALSE	canonical	1	3225855	junction_6	1224145.274599894	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	2639	3469	15.0	-4993	False	ATTAAA	-16
PB.4475.3	chr16	-	1799	20	full-splice_match	NAE1	ENST00000290810.7	1837	20	33	5	-1	0	multi-exon	FALSE	canonical	1	326902	junction_19	172015.4603296651	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	66	1670	25.0	-6	True	AATAAA	-17
PB.4475.2	chr16	-	2596	19	novel_in_catalog	NAE1	novel	473	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	35260	junction_18	269223.949603483	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	193	927	25.0	-17	True	AATAAA	-17
PB.4475.1	chr16	-	3779	17	novel_in_catalog	NAE1	novel	473	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	326902	junction_16	175535.357823173	NA	2	NA	TRUE	NA	NA	NA	C	coding	250	753	60	812	25.0	0	True	AATAAA	-17
PB.4475.7	chr16	-	3176	18	novel_in_catalog	NAE1	novel	473	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	326902	junction_17	168098.81337444414	NA	19	2	TRUE	NA	NA	NA	C	coding	387	1164	61	1224	25.0	-1	True	AATAAA	-16
PB.4475.6	chr16	-	1642	18	novel_in_catalog	NAE1	novel	473	4	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	6026	junction_14	254651.104996417	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	392	1513	25.0	-1	True	AATAAA	-17
PB.4475.5	chr16	-	1693	19	full-splice_match	NAE1	ENST00000394074.6	1654	19	-7	-32	1	0	multi-exon	FALSE	canonical	1	17063	junction_18	228024.33834016978	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	227	1564	25.0	-4	True	AATAAA	-17
PB.4475.4	chr16	-	1909	21	full-splice_match	NAE1	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	1	35260	junction_20	266142.01290943805	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	194	1780	25.0	-18	True	AATAAA	-17
PB.10247.10	chr6	+	1828	7	full-splice_match	VTA1	ENST00000620996.4	3272	7	101	1343	6	536	multi-exon	FALSE	canonical	1	27449	junction_6	323457.8050933468	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	26	868	40.0	0	True	AATAAA	-31
PB.7079.10	chr2	+	6015	28	novel_not_in_catalog	DGKD	novel	6297	30	NA	NA	-280	0	any annotated donor/acceptor	FALSE	canonical	1	1272	junction_1	67640.1628506994	NA	0	NA	TRUE	NA	NA	NA	C	coding	1081	3246	134	3379	20.0	-402	False	AATAAA	-22
PB.2663.28	chr12	+	3325	6	novel_not_in_catalog	RAB5B	novel	3322	6	NA	NA	395	-21	any annotated donor/acceptor	FALSE	canonical	1	223	junction_1	462634.7004356677	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	205	852	85.0	358	False	NA	NA
PB.346.1	chr1	-	1227	9	full-splice_match	EBNA1BP2	ENST00000236051.2	1322	9	-37	132	-15	30	multi-exon	FALSE	canonical	1	1360335	junction_8	169070.46123135873	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	180	1100	40.0	-19	True	AATAAA	-17
PB.2663.25	chr12	+	3448	6	novel_not_in_catalog	RAB5B	novel	3322	6	NA	NA	3	-22	any annotated donor/acceptor	FALSE	canonical	1	6791	junction_1	460301.01559722854	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	329	976	80.0	-34	False	NA	NA
PB.2663.24	chr12	+	3478	8	novel_not_in_catalog	RAB5B	novel	3322	6	NA	NA	1	-21	any annotated donor/acceptor	FALSE	canonical	1	905	junction_3	537342.3961903924	NA	15	1	TRUE	NA	NA	NA	C	coding	215	648	358	1005	85.0	24	True	NA	NA
PB.2663.27	chr12	+	3516	7	novel_not_in_catalog	RAB5B	novel	3322	6	NA	NA	39	-21	any annotated donor/acceptor	FALSE	canonical	1	818	junction_1	520085.8619143787	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	153	1043	85.0	2	True	NA	NA
PB.2663.26	chr12	+	3377	7	novel_not_in_catalog	RAB5B	novel	3322	6	NA	NA	3	-20	any annotated donor/acceptor	FALSE	canonical	1	296	junction_2	521679.2577832986	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	256	903	85.0	-34	False	NA	NA
PB.2663.21	chr12	+	3122	5	full-splice_match	RAB5B	ENST00000549505.5	3148	5	5	21	1	-21	multi-exon	FALSE	canonical	1	4186	junction_2	570927.5855320883	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	182	649	85.0	1	True	NA	NA
PB.2663.20	chr12	+	3380	7	novel_in_catalog	RAB5B	novel	3322	6	NA	NA	2	-21	combination_of_known_junctions	FALSE	canonical	1	7617	junction_2	518187.01684837905	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	260	907	85.0	-2	True	NA	NA
PB.2663.23	chr12	+	3336	6	novel_not_in_catalog	RAB5B	novel	3322	6	NA	NA	0	-21	any annotated donor/acceptor	FALSE	canonical	1	395	junction_1	462573.5467488819	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	216	863	85.0	19	True	NA	NA
PB.2663.22	chr12	+	3149	5	full-splice_match	RAB5B	ENST00000448789.2	1530	5	-20	-1599	-3	-21	multi-exon	FALSE	canonical	1	1592	junction_3	493197.9463858173	NA	5	NA	TRUE	NA	NA	NA	C	coding	174	525	152	676	85.0	3	True	NA	NA
PB.4865.4	chr17	-	4021	15	full-splice_match	PHF12	ENST00000332830.8	4759	15	238	500	-43	355	multi-exon	FALSE	canonical	1	228347	junction_14	61415.55004430798	NA	12	NA	TRUE	NA	NA	NA	C	coding	1000	3003	586	3588	50.0	-81	True	ATTAAA	-26
PB.11371.1	chr8	-	3853	1	full-splice_match	RHPN1-AS1	ENST00000518049.1	1918	1	-76	-1859	-76	1859	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	117	354	1546	1899	35.0	-2	True	AATACA	-21
PB.4865.2	chr17	-	3947	15	novel_in_catalog	PHF12	novel	4759	15	NA	NA	54	-18	combination_of_known_junctions	FALSE	canonical	1	3734	junction_14	104813.7952562806	NA	2	NA	TRUE	NA	NA	NA	C	coding	914	2745	291	3035	70.0	-100	True	NA	NA
PB.18.29	chr1	-	4192	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-28	0	intron_retention	FALSE	canonical	1	38349	junction_4	498695.85941724124	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	51	731	45.0	8459	False	AATAAA	-20
PB.18.28	chr1	-	4190	12	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	1	intron_retention	FALSE	non_canonical	0	0	junction_3	505477.07335169846	NA	1	1	TRUE	NA	NA	NA	C	coding	226	681	31	711	45.0	-23	True	AATAAA	-21
PB.11585.1	chr9	-	2103	3	full-splice_match	ANKRD20A3	ENST00000615683.1	836	3	-58	-1209	-58	1209	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	165	498	340	837	75.0	NA	False	NA	NA
PB.6316.4	chr2	-	2391	8	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	-1	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	26250.458545266116	NA	0	NA	TRUE	NA	NA	NA	B	coding	249	750	461	1210	35.0	-12	False	NA	NA
PB.18.26	chr1	-	2843	11	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	6	intron_retention	FALSE	non_canonical	0	0	junction_6	440794.08183219744	NA	3	1	TRUE	NA	NA	NA	C	coding	298	897	1418	2314	45.0	-23	True	AATAAA	-26
PB.18.21	chr1	-	2279	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-34	12	intron_retention	FALSE	canonical	1	26541	junction_6	424911.66533630964	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	848	1744	45.0	8453	False	AATAAA	-32
PB.18.20	chr1	-	3089	13	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	20	intron_retention	FALSE	canonical	1	38349	junction_4	523890.46516463405	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	31	711	30.0	-23	True	AATAAA	-40
PB.18.23	chr1	-	2529	13	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-7	10	intron_retention	FALSE	canonical	1	36683	junction_6	470244.1929235337	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	827	1996	50.0	-22	True	AATAAA	-30
PB.18.22	chr1	-	2127	11	full-splice_match	CCNL2	ENST00000400809.7	2305	11	-23	201	-7	12	multi-exon	FALSE	canonical	1	120035	junction_6	414450.8096978941	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	30	1592	45.0	-22	True	AATAAA	-32
PB.10827.4	chr7	+	2171	9	full-splice_match	METTL2B	ENST00000262432.12	2182	9	20	-9	0	9	multi-exon	FALSE	canonical	1	3756	junction_5	70944.62439191129	NA	2	NA	TRUE	NA	NA	NA	C	coding	378	1137	18	1154	25.0	-41	False	NA	NA
PB.4660.19	chr17	-	2388	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1051	1749	1	439	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2358	30	2387	30.0	-3	True	NA	NA
PB.4660.18	chr17	-	2581	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1053	1554	3	634	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	2	NA	TRUE	NA	NA	NA	C	coding	804	2415	28	2442	40.0	-1	True	NA	NA
PB.5494.21	chr18	+	3193	1	genic	NEDD4L	novel	NA	NA	NA	NA	8287	3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1622	False	AATAAA	-32
PB.4660.13	chr17	-	3010	15	novel_in_catalog	TSR1	novel	5188	15	NA	NA	0	-1080	combination_of_known_junctions	FALSE	canonical	1	7316	junction_11	256688.86708808446	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	31	2397	30.0	-4	True	TATAAA	-12
PB.4660.12	chr17	-	3058	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1050	1080	0	-1080	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	31	2445	30.0	-4	True	TATAAA	-12
PB.7079.12	chr2	+	2319	17	novel_not_in_catalog	DGKD	novel	6297	30	NA	NA	-101	-2	any annotated donor/acceptor	FALSE	canonical	1	2918	junction_12	92760.39123116813	NA	2	1	TRUE	NA	NA	NA	C	coding	429	1290	490	1779	75.0	-3289	False	NA	NA
PB.4660.17	chr17	-	3160	13	incomplete-splice_match	TSR1	ENST00000301364.9	5188	15	1050	1474	0	714	intron_retention	FALSE	canonical	1	333052	junction_5	200111.44360585886	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	824	2941	35.0	-4	True	ATTAAA	-17
PB.4660.16	chr17	-	2621	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1052	1515	2	673	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	29	2443	55.0	-2	True	TATAAA	-13
PB.4660.15	chr17	-	2790	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1047	1351	-3	837	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	34	2448	25.0	-7	True	ATTAAA	-16
PB.10827.7	chr7	+	1821	8	full-splice_match	METTL2B	ENST00000482555.5	1590	8	20	-251	0	251	multi-exon	FALSE	canonical	1	3756	junction_4	72398.42874267482	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	632	1360	20.0	-41	False	AAAAAG	-11
PB.4901.1	chr17	-	2146	1	novel_in_catalog	CCT6B	novel	1838	14	NA	NA	0	-16754	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.6554.1	chr2	-	1639	9	full-splice_match	DUSP11	ENST00000272444.7	1653	9	-2	16	-2	-16	multi-exon	FALSE	canonical	1	302716	junction_5	87756.37182270228	NA	5	NA	TRUE	NA	NA	NA	A	coding	377	1134	45	1178	35.0	-57	False	ATTAAA	-31
PB.427.3	chr1	-	2604	8	novel_in_catalog	AL357673.1	novel	2542	10	NA	NA	63	-29828	no_combination_of_known_junctions	FALSE	canonical	1	26354	junction_3	12597.577418548637	NA	2	NA	TRUE	NA	NA	NA	B	coding	314	945	261	1205	20.0	8	True	NA	NA
PB.427.2	chr1	-	3329	7	full-splice_match	CYB5RL	ENST00000421415.5	3339	7	-10	20	-9	0	multi-exon	FALSE	canonical	1	7551	junction_4	17615.025588179604	NA	0	NA	TRUE	NA	NA	NA	A	coding	167	504	563	1066	100.0	-2	True	NA	NA
PB.427.1	chr1	-	3489	8	novel_in_catalog	AL357673.1	novel	2542	10	NA	NA	43	-28963	no_combination_of_known_junctions	FALSE	canonical	1	26354	junction_3	12597.577418548637	NA	0	NA	TRUE	NA	NA	NA	B	coding	314	945	281	1225	95.0	-12	True	NA	NA
PB.4461.1	chr16	+	4001	10	full-splice_match	MMP15	ENST00000219271.3	4250	10	246	3	246	-3	multi-exon	FALSE	canonical	1	100198	junction_1	36117.48100741506	NA	6	NA	TRUE	NA	NA	NA	C	coding	669	2010	540	2549	25.0	12	True	AATAAA	-14
PB.4461.2	chr16	+	3303	10	novel_not_in_catalog	MMP15	novel	4250	10	NA	NA	422	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	65166.662707208365	NA	4	NA	TRUE	NA	NA	NA	C	coding	600	1803	49	1851	25.0	188	False	AATAAA	-14
PB.10827.2	chr7	+	2321	10	novel_not_in_catalog	AC010655.4	novel	707	5	NA	NA	20892	11406	intron_retention	TRUE	non_canonical	0	0	junction_9	70498.23212440626	NA	6	NA	TRUE	NA	NA	NA	B	coding	378	1137	35	1171	90.0	-58	False	NA	NA
PB.7692.2	chr22	-	2922	22	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	16544	junction_20	199912.46788011587	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	249	2522	25.0	-4	True	AATAAA	-17
PB.9892.1	chr6	+	5423	41	full-splice_match	C4B	ENST00000435363.7	5427	41	0	4	0	-3	multi-exon	FALSE	canonical	1	1901	junction_13	107299.64276384789	NA	4	NA	TRUE	NA	NA	NA	A	coding	1744	5235	52	5286	20.0	NA	False	ATTAAA	-28
PB.8337.1	chr3	+	3629	19	incomplete-splice_match	SLC15A2	ENST00000489711.5	5673	22	17522	1284	-3314	-1284	5prime_fragment	FALSE	canonical	1	48746	junction_10	14560.88142226321	NA	5	1	TRUE	NA	NA	NA	A	coding	526	1581	238	1818	50.0	-7712	False	NA	NA
PB.10210.8	chr6	+	3101	3	full-splice_match	TMEM200A	ENST00000296978.3	3512	3	710	-299	163	299	multi-exon	FALSE	canonical	1	40000	junction_2	3694.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	162	1637	20.0	13	True	AATAAA	-14
PB.10210.1	chr6	+	3149	2	novel_not_in_catalog	TMEM200A	novel	3512	3	NA	NA	-105056	294	any annotated donor/acceptor	FALSE	canonical	1	6035	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	215	1690	25.0	NA	False	AATAAA	-9
PB.10210.2	chr6	+	3127	2	antisense	novelGene_SAMD3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1030	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	99	300	1971	2270	25.0	NA	False	NA	NA
PB.10210.3	chr6	+	2961	3	antisense	novelGene_SAMD3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	301	junction_2	1317.5	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.10210.4	chr6	+	3123	2	novel_not_in_catalog	TMEM200A	novel	3512	3	NA	NA	-105326	0	any annotated donor/acceptor	FALSE	canonical	1	6035	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	485	1960	30.0	NA	False	AATAAA	-23
PB.10210.5	chr6	+	3290	2	antisense	novelGene_SAMD3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2936	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.10210.6	chr6	+	3264	3	full-splice_match	TMEM200A	ENST00000296978.3	3512	3	248	0	248	0	multi-exon	FALSE	canonical	1	40000	junction_2	3694.0	NA	12	NA	TRUE	NA	NA	NA	C	coding	491	1476	624	2099	25.0	-35	True	AATAAA	-25
PB.10210.7	chr6	+	3421	2	full-splice_match	TMEM200A	ENST00000617887.4	2899	2	-221	-301	-221	299	multi-exon	FALSE	canonical	1	19617	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	482	1957	20.0	-6	True	AATAAA	-14
PB.10202.5	chr6	+	2178	13	novel_in_catalog	TRMT11	novel	1565	13	NA	NA	3	-4	no_combination_of_known_junctions	FALSE	canonical	1	11505	junction_8	84765.29725279188	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	23	868	35.0	-11	True	AATAAA	-18
PB.11284.30	chr8	-	3499	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-645	any annotated donor/acceptor	FALSE	canonical	1	60701	junction_3	430784.8828119312	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	591	1934	25.0	-1	True	AATAAA	-18
PB.330.9	chr1	+	2073	10	full-splice_match	NFYC	ENST00000372651.5	1202	10	-210	-661	-24	0	multi-exon	FALSE	canonical	1	39437	junction_1	128626.78836333692	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	293	1300	20.0	-33	True	AATAAA	-14
PB.11284.32	chr8	-	2991	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	28	-162	28	162	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	739	2085	30.0	-3	True	AGTAAA	-13
PB.11284.33	chr8	-	2844	12	full-splice_match	AZIN1	ENST00000337198.9	4721	12	574	1303	30	163	multi-exon	FALSE	canonical	1	686724	junction_10	254522.01808630873	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	591	1937	30.0	-1	True	AGTAAA	-14
PB.11284.34	chr8	-	2830	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	29	166	any annotated donor/acceptor	FALSE	canonical	1	13952	junction_10	416094.7835683715	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	574	1920	30.0	-2	True	AGTAAA	-17
PB.11284.35	chr8	-	2745	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	166	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	517612.5711917382	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	737	1828	30.0	-1	True	AGTAAA	-17
PB.11284.36	chr8	-	2994	12	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	30	162	combination_of_known_junctions	FALSE	canonical	1	43126	junction_7	433538.8151221343	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	1243	2088	30.0	-1	True	AGTAAA	-13
PB.5672.4	chr19	-	3658	8	novel_in_catalog	TIMM44	novel	868	4	NA	NA	-58	1950	intron_retention	FALSE	canonical	1	38174	junction_4	225537.1297828672	NA	4	NA	TRUE	NA	NA	NA	C	coding	150	453	1151	1603	100.0	3	True	NA	NA
PB.6853.10	chr2	-	2933	14	novel_not_in_catalog	LNPK	novel	7610	13	NA	NA	7	526	any annotated donor/acceptor	FALSE	canonical	1	11205	junction_11	92788.98919725616	NA	3	NA	TRUE	NA	NA	NA	C	coding	353	1062	552	1613	25.0	-21	True	AATATA	-8
PB.11284.39	chr8	-	2811	12	full-splice_match	AZIN1	ENST00000337198.9	4721	12	571	1339	27	127	multi-exon	FALSE	canonical	1	686724	junction_10	254522.01808630873	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	594	1940	35.0	-4	True	AATAAA	-22
PB.10884.15	chr7	-	3876	15	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	1	9946	junction_8	64332.599849436796	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	185	853	30.0	-16	True	AATAAA	-12
PB.10884.14	chr7	-	3010	12	full-splice_match	SLC37A3	ENST00000340308.7	2955	12	-57	2	-6	0	multi-exon	FALSE	canonical	1	12062	junction_2	62035.53013814471	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	170	1501	25.0	-1	True	AATAAA	-16
PB.10884.17	chr7	-	3365	16	novel_not_in_catalog	SLC37A3	novel	3488	16	NA	NA	-9	-4	any annotated donor/acceptor	FALSE	canonical	1	56	junction_13	77653.88162409455	NA	45	4	TRUE	NA	NA	NA	C	coding	412	1239	420	1658	30.0	-4	True	AATAAA	-12
PB.10731.1	chr7	+	2215	1	novel_in_catalog	MOSPD3	novel	1053	6	NA	NA	21	-287	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	119	360	262	621	75.0	-9	True	NA	NA
PB.10884.11	chr7	-	3162	14	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	4947	junction_9	59065.09130937338	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	166	636	25.0	3	True	AATAAA	-16
PB.10884.10	chr7	-	3143	14	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	6081	junction_2	60075.68100518451	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	153	1634	25.0	16	True	AATAAA	-16
PB.10884.13	chr7	-	3072	13	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	3365	junction_8	59628.95196890284	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	173	1414	25.0	-4	True	AATAAA	-16
PB.10884.12	chr7	-	3115	13	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	6705	junction_2	61886.98049059314	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	173	1606	25.0	-4	True	AATAAA	-16
PB.9331.2	chr5	+	8456	14	full-splice_match	VCAN	ENST00000343200.9	9455	14	13	986	13	-19	multi-exon	FALSE	canonical	1	272353	junction_1	171190.60830541005	NA	0	NA	TRUE	NA	NA	NA	C	coding	2361	7086	488	7573	100.0	1	True	AAAACA	-6
PB.10202.4	chr6	+	4662	12	novel_in_catalog	TRMT11	novel	1565	13	NA	NA	-10	-4	intron_retention	FALSE	canonical	1	92742	junction_6	68404.89041444019	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	55	822	35.0	-221	False	AATAAA	-18
PB.10884.19	chr7	-	3018	12	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	9946	junction_5	76102.94047609092	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	147	815	30.0	22	True	AATAAA	-12
PB.10884.18	chr7	-	3319	15	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	1	744	junction_12	79777.88464386605	NA	12	1	TRUE	NA	NA	NA	C	coding	420	1263	403	1665	30.0	16	True	AATAAA	-12
PB.11049.4	chr8	-	3347	6	full-splice_match	TRIM35	ENST00000305364.8	4229	6	22	860	22	62	multi-exon	FALSE	canonical	1	106418	junction_3	22607.856310583717	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	63	1544	30.0	-28	False	AATAAA	-20
PB.5672.2	chr19	-	1847	13	full-splice_match	TIMM44	ENST00000270538.7	2075	13	249	-21	-4	-1	multi-exon	TRUE	canonical	1	162087	junction_12	152032.6146185188	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	21	1379	25.0	-6	True	AATAAA	-21
PB.8983.11	chr4	+	3624	10	incomplete-splice_match	JADE1	ENST00000611140.4	5648	11	19805	1977	216	913	5prime_fragment	FALSE	canonical	1	127492	junction_8	53512.70190395667	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	111	2639	85.0	NA	False	NA	NA
PB.7024.13	chr2	+	2974	13	full-splice_match	ANKZF1	ENST00000477479.5	2940	13	-3	-31	-3	0	multi-exon	FALSE	canonical	1	39006	junction_2	149128.6449554312	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	1775	2770	30.0	-14	True	AATAAA	-12
PB.860.8	chr1	+	2014	1	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	0	-7108	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	109	330	56	385	85.0	0	True	NA	NA
PB.4877.1	chr17	-	3207	11	novel_in_catalog	BLMH	novel	2365	12	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	352576	junction_9	100775.56647863609	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	1556	2395	35.0	-7	True	AATAAA	-17
PB.4877.2	chr17	-	2560	12	full-splice_match	BLMH	ENST00000261714.10	2365	12	-207	12	-145	-2	multi-exon	FALSE	canonical	1	352576	junction_10	98607.60597053186	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	383	1750	35.0	-146	False	AATAAA	-15
PB.10202.7	chr6	+	1997	13	novel_in_catalog	TRMT11	novel	1565	13	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	1	20841	junction_1	82544.94214163983	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	359	1561	35.0	-7	True	AATAAA	-18
PB.2297.3	chr11	-	3378	18	novel_not_in_catalog	PCSK7	novel	4649	17	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	132254.32954596978	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2358	179	2536	35.0	0	True	AATAAA	-9
PB.2297.2	chr11	-	3463	17	full-splice_match	PCSK7	ENST00000320934.7	4649	17	449	737	-2	0	multi-exon	FALSE	canonical	1	3502	junction_2	120837.80651914935	NA	3	1	TRUE	NA	NA	NA	C	coding	785	2358	183	2540	25.0	-4	True	AATAAA	-13
PB.2297.1	chr11	-	4153	17	novel_not_in_catalog	PCSK7	novel	4649	17	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	3502	junction_2	134975.0990849794	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	1950	3230	25.0	-11	True	AATAAA	-13
PB.3140.4	chr13	-	1699	1	novel_in_catalog	TSC22D1	novel	3135	3	NA	NA	60	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	2023	False	AATAAA	-16
PB.2297.7	chr11	-	3713	12	incomplete-splice_match	PCSK7	ENST00000540028.5	3332	16	31	11379	10	2667	3prime_fragment	FALSE	canonical	1	78999	junction_11	85941.57146448466	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	171	1712	100.0	8	True	NA	NA
PB.2297.6	chr11	-	4213	16	novel_in_catalog	PCSK7	novel	4649	17	NA	NA	12	-1	intron_retention	FALSE	canonical	1	3502	junction_2	124797.96122864615	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	2015	3295	30.0	10	True	AATAAA	-8
PB.2297.5	chr11	-	3321	16	novel_in_catalog	PCSK7	novel	4649	17	NA	NA	16	0	no_combination_of_known_junctions	FALSE	canonical	1	858	junction_15	133176.56180998552	NA	1	1	TRUE	NA	NA	NA	C	coding	785	2358	45	2402	35.0	14	True	AATAAA	-9
PB.2297.4	chr11	-	3362	16	novel_in_catalog	PCSK7	novel	4649	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	359	junction_2	104925.43533796856	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	180	1973	35.0	-1	True	AATAAA	-9
PB.2297.8	chr11	-	1930	9	incomplete-splice_match	PCSK7	ENST00000540028.5	3332	16	32	17524	11	2098	3prime_fragment	FALSE	canonical	1	78999	junction_8	97203.88022058328	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	170	1465	35.0	9	True	ATTAAA	-27
PB.8983.10	chr4	+	3371	9	novel_in_catalog	JADE1	novel	5772	11	NA	NA	-29	-164	combination_of_known_junctions	FALSE	canonical	1	1037	junction_1	89889.52680573736	NA	18	NA	TRUE	NA	NA	NA	C	coding	509	1530	177	1706	30.0	NA	False	AATAAA	-8
PB.1021.11	chr1	+	2895	10	full-splice_match	NEK7	ENST00000367385.8	4149	10	37	1217	2	-1217	multi-exon	FALSE	canonical	1	247655	junction_1	151996.90365129235	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	327	1214	25.0	2	True	TATAAA	-14
PB.8971.2	chr4	+	2546	15	novel_not_in_catalog	SPATA5	novel	8137	16	NA	NA	3	-6884	any annotated donor/acceptor	FALSE	canonical	1	8202	junction_14	25595.94589161992	NA	0	NA	TRUE	NA	NA	NA	B	coding	799	2400	67	2466	20.0	-24	True	AGTAAA	-6
PB.5011.1	chr17	-	7078	23	novel_in_catalog	BRCA1	novel	3668	22	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	1	30252	junction_22	42074.598776169216	NA	0	NA	TRUE	NA	NA	NA	C	coding	1862	5589	105	5693	30.0	2	True	AATAAA	-23
PB.5011.6	chr17	-	3258	23	novel_in_catalog	BRCA1	novel	3668	22	NA	NA	-2	-19	combination_of_known_junctions	FALSE	canonical	1	20462	junction_13	43307.026873856084	NA	1	1	TRUE	NA	NA	NA	C	coding	760	2283	122	2404	95.0	-9	True	NA	NA
PB.5011.7	chr17	-	5736	15	novel_in_catalog	BRCA1	novel	3668	22	NA	NA	-20	-3069	combination_of_known_junctions	FALSE	canonical	1	30252	junction_14	34606.54686793308	NA	1	NA	TRUE	NA	NA	NA	C	coding	1675	5028	166	5193	20.0	60	False	ATTAAA	-14
PB.5011.4	chr17	-	6565	23	full-splice_match	BRCA1	ENST00000357654.8	7207	23	113	529	0	-19	multi-exon	FALSE	canonical	1	34608	junction_22	36806.70898883576	NA	0	NA	TRUE	NA	NA	NA	C	coding	1863	5592	120	5711	95.0	-7	True	NA	NA
PB.5011.5	chr17	-	6440	21	novel_in_catalog	BRCA1	novel	3668	22	NA	NA	-1	-19	combination_of_known_junctions	FALSE	canonical	1	21537	junction_14	48982.8795058794	NA	0	NA	TRUE	NA	NA	NA	C	coding	1821	5466	121	5586	95.0	-8	True	NA	NA
PB.9758.4	chr6	+	3065	7	full-splice_match	MYLIP	ENST00000356840.7	1666	7	-39	-1360	-39	-7	multi-exon	FALSE	canonical	1	227922	junction_2	23410.55631369461	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	238	1575	35.0	0	True	AATAAA	-8
PB.7425.1	chr20	+	2252	6	novel_not_in_catalog	TPD52L2	novel	2197	5	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	11549	junction_3	552578.4847385935	NA	3	NA	TRUE	NA	NA	NA	C	coding	127	384	127	510	5.0	-8473	False	AATAAA	-22
PB.5011.8	chr17	-	3460	10	full-splice_match	BRCA1	ENST00000494123.5	1612	10	52	-1900	4	801	multi-exon	FALSE	canonical	1	30252	junction_9	25765.200584039754	NA	1	NA	TRUE	NA	NA	NA	C	coding	1106	3318	142	3459	70.0	-35	True	TATAAA	-35
PB.5011.9	chr17	-	2818	10	full-splice_match	BRCA1	ENST00000494123.5	1612	10	86	-1292	0	193	multi-exon	FALSE	canonical	1	30252	junction_9	25765.200584039754	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2709	108	2816	65.0	-1	True	AAGAAA	-30
PB.9758.1	chr6	+	3057	6	incomplete-splice_match	MYLIP	ENST00000356840.7	1666	7	-62	15	-62	-15	intron_retention	FALSE	canonical	1	227922	junction_2	23903.086339634054	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	261	1595	80.0	-2152	False	NA	NA
PB.9758.2	chr6	+	2873	5	novel_in_catalog	MYLIP	novel	1666	7	NA	NA	-43	-15	intron_retention	FALSE	canonical	1	32114	junction_4	96128.4684195452	NA	2	NA	TRUE	NA	NA	NA	C	coding	389	1170	242	1411	80.0	-4	True	NA	NA
PB.9758.3	chr6	+	1693	7	full-splice_match	MYLIP	ENST00000356840.7	1666	7	-41	14	-41	-14	multi-exon	FALSE	canonical	1	227922	junction_2	23410.55631369461	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	240	1577	85.0	-2	True	NA	NA
PB.1557.19	chr10	+	1937	10	full-splice_match	ENTPD1	ENST00000371205.4	2035	10	203	-105	1	11	multi-exon	FALSE	canonical	1	202323	junction_7	60927.94955995357	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	81	1613	35.0	-3	True	TATAAA	-24
PB.1557.18	chr10	+	1808	9	novel_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	1	14385	junction_1	114811.95882010451	NA	4	NA	TRUE	NA	NA	NA	C	coding	402	1209	278	1486	40.0	-4	True	TATAAA	-22
PB.8971.1	chr4	+	4200	17	novel_not_in_catalog	SPATA5	novel	8137	16	NA	NA	-18	-151	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	26073.536696416446	NA	3	NA	TRUE	NA	NA	NA	B	coding	893	2682	88	2769	30.0	-81	False	AATAAA	-27
PB.115.4	chr1	-	2723	16	full-splice_match	ZBTB17	ENST00000375743.8	2745	16	20	2	-2	0	multi-exon	FALSE	canonical	1	146594	junction_15	64935.03175554266	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	214	2625	20.0	11	False	AATAAA	-15
PB.1557.11	chr10	+	1831	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	-16	11	any annotated donor/acceptor	FALSE	canonical	1	13363	junction_6	102780.5465839658	NA	2	1	TRUE	NA	NA	NA	C	coding	469	1410	98	1507	35.0	-448	False	TATAAA	-24
PB.1557.10	chr10	+	2026	9	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	-16	7564	any annotated donor/acceptor	FALSE	canonical	1	12198	junction_8	144918.1430461262	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	294	1382	40.0	-448	False	AATAAA	-10
PB.1557.13	chr10	+	3140	10	full-splice_match	ENTPD1	ENST00000371205.4	2035	10	203	-1308	1	1157	multi-exon	FALSE	canonical	1	202323	junction_7	60927.94955995357	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	81	1613	20.0	-3	True	AATAAA	-13
PB.1557.12	chr10	+	1728	9	incomplete-splice_match	ENTPD1	ENST00000371205.4	2035	10	186	1436	-16	-1392	3prime_fragment	FALSE	canonical	1	202323	junction_7	64622.27336994575	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	98	1522	15.0	-448	False	ATTAAA	-20
PB.1557.15	chr10	+	4464	9	incomplete-splice_match	ENTPD1	ENST00000371205.4	2035	10	201	-1315	-1	1164	intron_retention	FALSE	canonical	1	202323	junction_7	64622.27336994575	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	83	1507	15.0	-5	True	AATAAA	-20
PB.1557.14	chr10	+	3778	10	full-splice_match	ENTPD1	ENST00000371205.4	2035	10	197	-1940	-5	-1153	multi-exon	FALSE	canonical	1	202323	junction_7	60927.94955995357	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	87	1619	20.0	-9	True	AATAAA	-20
PB.1557.17	chr10	+	2140	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	7566	any annotated donor/acceptor	FALSE	canonical	1	12198	junction_9	111062.13123303861	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	82	1494	35.0	-4	True	AATAAA	-12
PB.1557.16	chr10	+	2897	9	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	0	1164	any annotated donor/acceptor	FALSE	canonical	1	13363	junction_5	135577.5380109455	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	278	1363	15.0	-4	True	AATAAA	-20
PB.11070.3	chr8	-	1895	6	full-splice_match	SARAF	ENST00000521265.5	1741	6	-125	-29	1	1	multi-exon	FALSE	canonical	1	23760	junction_1	1438264.3498291126	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	125	1168	15.0	-11	True	AATAAA	-14
PB.3451.3	chr14	+	2791	2	full-splice_match	SOCS4	ENST00000395472.2	6779	2	-81	4069	-81	-1289	multi-exon	FALSE	canonical	1	85773	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	414	1736	30.0	-460	False	AATAAA	-20
PB.943.10	chr1	-	1886	7	novel_in_catalog	GAS5	novel	542	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	189239	junction_6	1165016.4211742063	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	1550	1870	15.0	-2	True	AATAAA	-13
PB.11070.2	chr8	-	1724	5	full-splice_match	SARAF	ENST00000520303.5	1803	5	83	-4	4	0	multi-exon	FALSE	canonical	1	303258	junction_4	1485599.119352084	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	459	962	75.0	-8	True	NA	NA
PB.115.1	chr1	-	3222	14	novel_in_catalog	ZBTB17	novel	776	2	NA	NA	-9	0	intron_retention	FALSE	canonical	1	146594	junction_13	64398.522898272204	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	1121	2251	20.0	-10	True	AATAAA	-15
PB.11070.1	chr8	-	1842	6	full-splice_match	SARAF	ENST00000256255.10	2154	6	198	114	34	0	multi-exon	FALSE	canonical	1	1684116	junction_5	820231.6750442159	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	61	1080	75.0	321	False	NA	NA
PB.3451.5	chr14	+	6887	3	novel_in_catalog	SOCS4	novel	6779	2	NA	NA	-15	-8	combination_of_known_junctions	FALSE	canonical	1	3755	junction_1	22150.0	NA	22	NA	TRUE	NA	NA	NA	C	coding	440	1323	451	1773	35.0	-21	True	ATTAAA	-11
PB.115.3	chr1	-	2826	15	novel_in_catalog	ZBTB17	novel	776	2	NA	NA	3	0	intron_retention	FALSE	canonical	1	146594	junction_14	66073.97458496108	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	209	2305	20.0	16	False	AATAAA	-15
PB.4631.4	chr16	+	3445	12	novel_in_catalog	DEF8	novel	4450	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	48949	junction_9	152533.4281957795	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	45	1349	5.0	2	True	ATTAAA	-13
PB.8983.12	chr4	+	3467	8	incomplete-splice_match	JADE1	ENST00000413543.6	4012	9	20324	550	217	-1	5prime_fragment	FALSE	canonical	1	211679	junction_1	28143.761398815714	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	110	1639	20.0	NA	False	AATAAA	-18
PB.4596.2	chr16	+	1942	4	full-splice_match	MAP1LC3B	ENST00000268607.9	2688	4	530	216	-4	-216	multi-exon	FALSE	canonical	1	115	junction_3	105773.70547961762	NA	7	NA	TRUE	NA	NA	NA	C	coding	125	378	99	476	20.0	-6	True	NA	NA
PB.4596.1	chr16	+	2080	4	full-splice_match	MAP1LC3B	ENST00000268607.9	2688	4	515	93	-2	-93	multi-exon	FALSE	canonical	1	115	junction_3	105773.70547961762	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	114	491	20.0	-21	True	AAGAAA	-29
PB.115.2	chr1	-	2922	15	novel_in_catalog	ZBTB17	novel	776	2	NA	NA	3	0	intron_retention	FALSE	canonical	1	146594	junction_14	65315.94267259092	NA	14	NA	TRUE	NA	NA	NA	C	coding	580	1743	209	1951	20.0	16	False	AATAAA	-15
PB.2306.1	chr11	-	1661	12	full-splice_match	IFT46	ENST00000264021.7	1722	12	43	18	2	-3	multi-exon	TRUE	canonical	1	197652	junction_9	65018.653648506624	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	377	1291	30.0	-1	True	AGTAAA	-14
PB.2306.2	chr11	-	1838	13	full-splice_match	IFT46	ENST00000264020.6	1819	13	-22	3	19	-3	multi-exon	FALSE	canonical	1	43571	junction_10	110481.1005016494	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	401	1468	30.0	-25	True	AGTAAA	-14
PB.11138.10	chr8	+	2076	14	novel_not_in_catalog	LYN	novel	2297	13	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	235324.4608734097	NA	2	1	TRUE	NA	NA	NA	C	coding	491	1476	139	1614	85.0	-8	True	NA	NA
PB.3136.1	chr13	-	3133	12	novel_not_in_catalog	EPSTI1	novel	3160	13	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	119177.09362156238	NA	3	NA	TRUE	NA	NA	NA	C	coding	307	924	77	1000	10.0	-1	True	AATAAA	-40
PB.3136.2	chr13	-	3107	11	full-splice_match	EPSTI1	ENST00000313624.11	3114	11	6	1	-4	-1	multi-exon	FALSE	canonical	1	177963	junction_1	70263.97284818158	NA	2	NA	TRUE	NA	NA	NA	C	coding	307	924	79	1002	10.0	-3	True	AATAAA	-40
PB.3136.3	chr13	-	3005	10	novel_in_catalog	EPSTI1	novel	3160	13	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	3892	junction_1	110072.5328308678	NA	3	NA	TRUE	NA	NA	NA	C	coding	355	1068	77	1144	10.0	-1	True	AATAAA	-40
PB.2287.8	chr11	-	4361	22	full-splice_match	USP28	ENST00000545540.5	3431	22	0	-930	0	-1	multi-exon	FALSE	canonical	1	11017	junction_21	54065.71154163608	NA	2	NA	TRUE	NA	NA	NA	C	coding	920	2763	234	2996	10.0	-1	True	AATAAA	-14
PB.2287.9	chr11	-	4484	23	novel_in_catalog	USP28	novel	4669	25	NA	NA	5	-2	no_combination_of_known_junctions	FALSE	canonical	1	3661	junction_22	54801.49511804905	NA	4	NA	TRUE	NA	NA	NA	C	coding	1019	3060	61	3120	15.0	8	True	AATAAA	-13
PB.1381.8	chr10	+	2716	8	full-splice_match	CSGALNACT2	ENST00000374466.3	3730	8	-36	1050	-36	-1050	multi-exon	FALSE	canonical	1	65897	junction_5	71942.59972551247	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	372	2000	65.0	5	True	NA	NA
PB.1381.9	chr10	+	3897	8	novel_not_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-34	-1533	any annotated donor/acceptor	FALSE	canonical	1	24928	junction_4	80815.84946288793	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	370	1371	30.0	7	True	NA	NA
PB.1381.6	chr10	+	3170	8	full-splice_match	CSGALNACT2	ENST00000374466.3	3730	8	-36	596	-36	-596	multi-exon	FALSE	canonical	1	65897	junction_5	71942.59972551247	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	372	2000	60.0	5	True	TATAAA	-17
PB.1381.7	chr10	+	3164	4	novel_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-36	-9	no_combination_of_known_junctions	FALSE	canonical	1	1091	junction_2	59087.88528022381	NA	8	NA	TRUE	NA	NA	NA	C	coding	250	753	372	1124	55.0	5	True	AATAAA	-21
PB.1381.4	chr10	+	5422	8	novel_not_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-38	-12	any annotated donor/acceptor	FALSE	canonical	1	24928	junction_4	80815.84946288793	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	374	1375	50.0	3	True	AATAAA	-18
PB.1381.5	chr10	+	3484	6	novel_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-36	-8	no_combination_of_known_junctions	FALSE	canonical	1	9223	junction_4	92712.76858038487	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	372	1400	50.0	5	True	AATAAA	-22
PB.1381.2	chr10	+	3667	7	novel_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-41	-9	no_combination_of_known_junctions	FALSE	canonical	1	17117	junction_5	82898.98188240246	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	377	1627	55.0	0	True	AATAAA	-21
PB.1381.3	chr10	+	3879	9	novel_not_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-40	-9	any annotated donor/acceptor	FALSE	canonical	1	224	junction_4	85994.10067993036	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	376	1278	55.0	1	True	AATAAA	-21
PB.2287.2	chr11	-	4362	23	novel_in_catalog	USP28	novel	4669	25	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	6495	junction_11	63066.905385346894	NA	2	NA	TRUE	NA	NA	NA	C	coding	985	2958	35	2992	15.0	-3	True	AATAAA	-19
PB.1381.1	chr10	+	2260	3	novel_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-46	-9	no_combination_of_known_junctions	FALSE	canonical	1	4479	junction_1	70673.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	174	503	55.0	-5	True	AATAAA	-21
PB.11810.1	chr9	-	1563	7	novel_not_in_catalog	ST6GALNAC4	novel	1691	6	NA	NA	-10	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	117769.25352770231	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	299	1207	10.0	-8	True	NA	NA
PB.8497.12	chr3	+	4378	20	novel_in_catalog	SMC4	novel	708	6	NA	NA	-3	2	no_combination_of_known_junctions	FALSE	canonical	1	11317	junction_1	231133.79797037586	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	76	3231	40.0	-3	True	AATAAA	-20
PB.7143.17	chr20	+	3209	22	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	2851	junction_1	207895.75674924234	NA	5	NA	TRUE	NA	NA	NA	C	coding	793	2382	291	2672	15.0	2	True	AATAAA	-18
PB.8576.7	chr3	+	3214	18	novel_not_in_catalog	SENP2	novel	878	7	NA	NA	11	687	any annotated donor/acceptor	FALSE	canonical	1	1580	junction_6	120145.00839266997	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	725	1966	45.0	0	True	AATAAA	-17
PB.3838.3	chr15	-	3253	3	novel_not_in_catalog	SORD2P	novel	2498	10	NA	NA	2045	-32442	any annotated donor/acceptor	FALSE	canonical	1	1194	junction_1	10379.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-47	False	NA	NA
PB.3838.2	chr15	-	2733	10	novel_not_in_catalog	SORD2P	novel	2498	10	NA	NA	2070	-1	intron_retention	FALSE	canonical	1	3284	junction_1	14522.066840960806	NA	3	NA	TRUE	NA	NA	NA	B	coding	261	786	404	1189	15.0	-22	False	AATAAA	-19
PB.3838.1	chr15	-	3305	11	novel_not_in_catalog	SORD2P	novel	2498	10	NA	NA	2011	-1	intron_retention	FALSE	canonical	1	1194	junction_9	15110.272434340819	NA	1	NA	TRUE	NA	NA	NA	B	coding	259	780	982	1761	15.0	-81	False	AATAAA	-19
PB.8576.6	chr3	+	3034	17	full-splice_match	SENP2	ENST00000296257.9	5717	17	136	2547	12	599	multi-exon	FALSE	canonical	1	227460	junction_4	70776.27988287174	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	105	1874	30.0	1	True	ATTAAA	-27
PB.3838.4	chr15	-	1849	1	novel_in_catalog	SORD2P	novel	2498	10	NA	NA	2111	-53675	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-3	True	NA	NA
PB.8576.1	chr3	+	2729	17	full-splice_match	SENP2	ENST00000296257.9	5717	17	220	2768	96	378	multi-exon	FALSE	canonical	1	227460	junction_4	70776.27988287174	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	21	1790	15.0	-5642	False	TTTAAA	-3
PB.5241.2	chr17	-	1028	4	full-splice_match	SUMO2	ENST00000420826.6	3190	4	11	2151	11	131	multi-exon	FALSE	canonical	1	333865	junction_1	243789.23003328557	NA	1	NA	TRUE	NA	NA	NA	C	coding	95	288	139	426	30.0	-14	True	AATAAA	-11
PB.1220.1	chr1	+	2103	2	antisense	novelGene_AL139161.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	750	junction_1	0.0	NA	9	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-8691	False	NA	NA
PB.3878.17	chr15	-	4032	29	incomplete-splice_match	MYO5A	ENST00000553916.5	5989	41	-41	35416	-2	-10910	3prime_fragment	FALSE	canonical	1	1208	junction_1	69436.22996188772	NA	2	NA	TRUE	NA	NA	NA	B	coding	1317	3954	77	4030	25.0	-3	True	AATAAA	-22
PB.3878.16	chr15	-	3996	29	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	-22	-8612	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	69566.88433497115	NA	2	1	TRUE	NA	NA	NA	B	coding	1289	3870	97	3966	65.0	-23	True	AATACA	-35
PB.3957.1	chr15	-	2046	3	full-splice_match	THAP10	ENST00000249861.8	2399	3	352	1	-23	-1	multi-exon	FALSE	canonical	1	51085	junction_2	3398.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	257	774	162	935	30.0	-1	True	AATAAA	-17
PB.3878.14	chr15	-	6279	41	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	0	134	any annotated donor/acceptor	FALSE	canonical	1	541	junction_40	79998.31120135834	NA	5	1	TRUE	NA	NA	NA	B	coding	1876	5631	123	5753	20.0	-1	True	AATAAA	-17
PB.3878.12	chr15	-	6101	39	novel_in_catalog	MYO5A	novel	12225	41	NA	NA	-22	135	combination_of_known_junctions	FALSE	canonical	1	49034	junction_11	64443.225553373646	NA	1	NA	TRUE	NA	NA	NA	B	coding	1825	5478	97	5574	20.0	-23	True	AATAAA	-18
PB.3878.10	chr15	-	6248	41	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	-2	135	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	79294.72291590011	NA	2	1	TRUE	NA	NA	NA	B	coding	1289	3870	77	3946	20.0	-3	True	AATAAA	-18
PB.346.2	chr1	-	1818	8	novel_in_catalog	EBNA1BP2	novel	1503	10	NA	NA	-7	30	intron_retention	FALSE	canonical	1	1360335	junction_7	131791.88646250928	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	1188	1691	40.0	-11	True	AATAAA	-17
PB.2921.8	chr12	+	1798	2	novel_not_in_catalog	OAS2	novel	3613	11	NA	NA	-37	-3	any annotated donor/acceptor	FALSE	canonical	1	239	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	1	375	20.0	4	True	NA	NA
PB.7001.12	chr2	+	3054	12	novel_in_catalog	ARPC2	novel	1505	11	NA	NA	-4	0	intron_retention	FALSE	canonical	1	8711	junction_5	2635873.9103147145	NA	3	NA	TRUE	NA	NA	NA	C	coding	186	561	2301	2861	90.0	1	True	NA	NA
PB.3878.19	chr15	-	3723	28	incomplete-splice_match	MYO5A	ENST00000553916.5	5989	41	-48	38159	-9	-13653	3prime_fragment	FALSE	canonical	1	53553	junction_27	57513.42977203377	NA	0	NA	TRUE	NA	NA	NA	B	coding	1213	3639	84	3722	70.0	-10	True	AATGAA	-43
PB.3878.18	chr15	-	3951	28	incomplete-splice_match	MYO5A	ENST00000553916.5	5989	41	-66	37949	-27	-13443	3prime_fragment	FALSE	canonical	1	53553	junction_27	57513.42977203377	NA	2	NA	TRUE	NA	NA	NA	B	coding	1283	3849	102	3950	45.0	-28	True	NA	NA
PB.30.3	chr1	-	3188	12	full-splice_match	NADK	ENST00000341426.9	3235	12	40	7	-10	-7	multi-exon	FALSE	canonical	1	194595	junction_11	168658.45696143308	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	183	1523	50.0	18	True	AATAAA	-13
PB.6966.1	chr2	-	2673	1	incomplete-splice_match	INO80D	ENST00000403263.5	14136	11	89784	5	66846	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	2050	False	AATAAA	-11
PB.7820.1	chr22	-	3342	7	novel_not_in_catalog	DESI1	novel	3833	6	NA	NA	15	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	294249.37054615014	NA	0	NA	TRUE	NA	NA	NA	B	coding	168	507	243	749	15.0	-45	True	AATAAA	-19
PB.30.4	chr1	-	3289	13	novel_in_catalog	NADK	novel	3235	12	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	1	9257	junction_8	283263.28116214264	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	683	1624	50.0	21	True	AATAAA	-13
PB.2921.5	chr12	+	3520	11	novel_not_in_catalog	OAS2	novel	3613	11	NA	NA	38	0	intron_retention	FALSE	canonical	1	6272	junction_6	142504.19288024475	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	170	1540	15.0	-1	True	NA	NA
PB.30.5	chr1	-	3145	12	novel_in_catalog	NADK	novel	3235	12	NA	NA	26	-47	combination_of_known_junctions	FALSE	canonical	1	110879	junction_11	189749.56602870702	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	180	1520	20.0	-13	True	ATTAAA	-17
PB.6396.10	chr2	+	2022	4	full-splice_match	YPEL5	ENST00000379519.7	2499	4	28	449	6	-449	multi-exon	FALSE	canonical	1	90827	junction_2	332248.3172177099	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	416	781	35.0	0	True	ATTAAA	-21
PB.7037.27	chr2	+	4025	17	full-splice_match	ACSL3	ENST00000357430.7	5679	17	93	1561	1	856	multi-exon	FALSE	canonical	1	231016	junction_3	274418.0201148138	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	472	2601	90.0	-9	True	NA	NA
PB.2921.4	chr12	+	4081	10	full-splice_match	OAS2	ENST00000392583.6	4734	10	20	633	20	-131	multi-exon	FALSE	canonical	1	261282	junction_3	61403.28317397377	NA	2	1	TRUE	NA	NA	NA	C	coding	687	2064	188	2251	25.0	-158	False	NA	NA
PB.7037.26	chr2	+	2649	16	full-splice_match	ACSL3	ENST00000392066.7	3147	16	96	402	12	-4	multi-exon	FALSE	canonical	1	314472	junction_2	230567.5178005976	NA	9	1	TRUE	NA	NA	NA	C	coding	709	2130	354	2483	15.0	2	True	AGTAAA	-13
PB.8019.1	chr3	-	2342	1	intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	438	False	NA	NA
PB.7820.4	chr22	-	3220	7	novel_not_in_catalog	DESI1	novel	3833	6	NA	NA	23	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	294249.37054615014	NA	0	NA	TRUE	NA	NA	NA	B	coding	168	507	235	741	15.0	-37	True	AATAAA	-18
PB.1021.2	chr1	+	4315	12	novel_not_in_catalog	NEK7	novel	4149	10	NA	NA	6	-37	any annotated donor/acceptor	TRUE	canonical	1	1485	junction_2	252486.65711532705	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	546	1454	80.0	-118	False	AAAAAG	-43
PB.7820.5	chr22	-	2925	7	novel_not_in_catalog	DESI1	novel	3833	6	NA	NA	71	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	294249.37054615014	NA	36	2	TRUE	NA	NA	NA	B	coding	168	507	187	693	15.0	11	True	AATAAA	-18
PB.330.1	chr1	+	2336	10	novel_in_catalog	NFYC	novel	943	6	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	128886	junction_9	108259.66107682555	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	245	1564	20.0	15	True	AATAAA	-13
PB.7037.24	chr2	+	2760	17	full-splice_match	ACSL3	ENST00000357430.7	5679	17	102	2817	10	-2	multi-exon	FALSE	canonical	1	231016	junction_3	274418.0201148138	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	463	2592	10.0	0	True	AGTAAA	-15
PB.7820.6	chr22	-	1897	6	novel_in_catalog	DESI1	novel	3833	6	NA	NA	49	493	combination_of_known_junctions	FALSE	canonical	1	60558	junction_1	285913.2473794105	NA	0	NA	TRUE	NA	NA	NA	B	coding	209	630	209	838	25.0	-11	True	ATTAAA	-21
PB.7777.11	chr22	-	8725	12	novel_not_in_catalog	DDX17	novel	4791	13	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	971780.832230972	NA	3	NA	TRUE	NA	NA	NA	C	coding	407	1224	338	1561	30.0	-1	True	AATAAA	-13
PB.6440.10	chr2	-	3039	18	novel_in_catalog	THADA	novel	6114	38	NA	NA	-10	3004	no_combination_of_known_junctions	FALSE	canonical	1	8632	junction_3	39572.11606840716	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	151	2931	35.0	-19	True	AATAAA	-25
PB.6440.13	chr2	-	3076	18	incomplete-splice_match	THADA	ENST00000405975.6	6114	38	1	321241	1	-9	3prime_fragment	FALSE	canonical	1	67415	junction_17	26302.735319622516	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	140	2953	40.0	-8	True	AATAAA	-17
PB.7777.19	chr22	-	2500	13	full-splice_match	DDX17	ENST00000403230.1	2322	13	-9	-169	-9	-28	multi-exon	FALSE	canonical	1	1050274	junction_1	827883.5128735403	NA	1	NA	TRUE	NA	NA	NA	C	coding	650	1953	322	2274	85.0	15	True	NA	NA
PB.7777.18	chr22	-	2993	13	full-splice_match	DDX17	ENST00000403230.1	2322	13	1	-672	1	471	multi-exon	FALSE	canonical	1	1050274	junction_1	827883.5128735403	NA	4	NA	TRUE	NA	NA	NA	C	coding	650	1953	312	2264	25.0	-1	True	ATTAAA	-14
PB.9760.5	chr6	-	4278	4	novel_not_in_catalog	ATXN1	novel	10602	9	NA	NA	-165043	-5840	any annotated donor/acceptor	FALSE	canonical	1	6033	junction_3	33909.95508041194	NA	1	NA	TRUE	NA	NA	NA	C	coding	815	2448	454	2901	20.0	1	True	AATAAA	-21
PB.9760.4	chr6	-	5041	4	novel_not_in_catalog	ATXN1	novel	10602	9	NA	NA	-165011	-5045	any annotated donor/acceptor	FALSE	canonical	1	6033	junction_3	33909.95508041194	NA	3	NA	TRUE	NA	NA	NA	C	coding	815	2448	422	2869	20.0	-1	True	ATTAAA	-22
PB.9760.7	chr6	-	4105	4	novel_not_in_catalog	ATXN1	novel	10602	9	NA	NA	-165045	-6015	any annotated donor/acceptor	FALSE	canonical	1	6033	junction_3	33909.95508041194	NA	1	NA	TRUE	NA	NA	NA	C	coding	815	2448	456	2903	85.0	-1	True	TTTAAA	-10
PB.9760.6	chr6	-	4720	8	full-splice_match	ATXN1	ENST00000436367.5	10587	8	25	5842	-2	-5842	multi-exon	FALSE	canonical	1	74122	junction_1	20676.716666880384	NA	3	NA	TRUE	NA	NA	NA	C	coding	815	2448	898	3345	20.0	-12	True	AATAAA	-19
PB.499.2	chr1	+	1288	9	full-splice_match	RPF1	ENST00000370654.5	1385	9	-15	112	-7	-112	multi-exon	FALSE	canonical	1	525002	junction_1	121008.72290846433	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	31	1080	20.0	-15	True	AATAAA	-28
PB.9760.3	chr6	-	6511	4	novel_not_in_catalog	ATXN1	novel	10602	9	NA	NA	-165011	-3575	any annotated donor/acceptor	FALSE	canonical	1	6033	junction_3	33909.95508041194	NA	2	NA	TRUE	NA	NA	NA	C	coding	815	2448	422	2869	70.0	-1	True	AAGAAA	-12
PB.9760.2	chr6	-	6991	8	full-splice_match	ATXN1	ENST00000436367.5	10587	8	22	3574	-5	-3574	multi-exon	FALSE	canonical	1	74122	junction_1	20676.716666880384	NA	2	NA	TRUE	NA	NA	NA	C	coding	815	2448	901	3348	75.0	-15	True	AAGAAA	-13
PB.8948.2	chr4	-	5107	18	full-splice_match	CAMK2D	ENST00000296402.9	5820	18	711	2	2	-2	multi-exon	FALSE	canonical	1	72953	junction_1	80118.03081319512	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	149	1585	15.0	-1	True	AATAAA	-19
PB.8948.3	chr4	-	5122	19	full-splice_match	CAMK2D	ENST00000342666.9	1940	19	-113	-3069	2	-4	multi-exon	FALSE	canonical	1	73116	junction_1	100126.7758440102	NA	2	NA	TRUE	NA	NA	NA	C	coding	499	1500	114	1613	15.0	2	True	AATAAA	-17
PB.8948.1	chr4	-	5773	18	full-splice_match	CAMK2D	ENST00000394524.7	5294	18	-482	3	0	-3	multi-exon	FALSE	canonical	1	209019	junction_1	54651.02282045414	NA	2	NA	TRUE	NA	NA	NA	C	coding	478	1437	860	2296	15.0	692	False	AATAAA	-18
PB.8948.6	chr4	-	4226	18	full-splice_match	CAMK2D	ENST00000394524.7	5294	18	-317	1385	165	544	multi-exon	FALSE	canonical	1	209019	junction_1	54651.02282045414	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	695	2131	20.0	857	False	AATAAA	-17
PB.9760.8	chr6	-	2452	3	full-splice_match	ATXN1	ENST00000467008.5	3362	3	-55	965	-40	649	multi-exon	FALSE	canonical	1	48327	junction_1	20142.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	3	449	35.0	1299	False	TATAAA	-9
PB.8948.4	chr4	-	6482	17	full-splice_match	CAMK2D	ENST00000379773.6	1642	17	-69	-4771	-16	544	multi-exon	FALSE	canonical	1	299502	junction_11	40887.41857661566	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	132	1568	20.0	-16	True	AATAAA	-17
PB.8948.5	chr4	-	4063	18	full-splice_match	CAMK2D	ENST00000296402.9	5820	18	372	1385	8	544	multi-exon	FALSE	canonical	1	72953	junction_1	80118.03081319512	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	488	1924	20.0	1064	False	AATAAA	-17
PB.5039.4	chr17	+	2236	13	novel_in_catalog	GRN	novel	2342	13	NA	NA	150	1	combination_of_known_junctions	FALSE	canonical	1	97599	junction_1	849828.8461435763	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	150	1931	20.0	-7592	False	AATAAA	-16
PB.5039.5	chr17	+	2057	13	novel_not_in_catalog	GRN	novel	2342	13	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	11836	junction_9	908935.1005402635	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	41	1750	15.0	0	True	AATAAA	-18
PB.5039.6	chr17	+	2216	12	novel_in_catalog	GRN	novel	2342	13	NA	NA	1	2	intron_retention	FALSE	canonical	1	1618667	junction_1	502381.17658723384	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	40	1002	20.0	1	True	AATAAA	-17
PB.5039.7	chr17	+	1997	12	incomplete-splice_match	GRN	ENST00000053867.7	2342	13	4168	0	89	0	5prime_fragment	FALSE	canonical	1	2488660	junction_2	339714.22658734024	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	335	1693	20.0	-3802	False	AATAAA	-15
PB.10667.18	chr7	-	1130	7	incomplete-splice_match	CYP51A1	ENST00000003100.12	3210	10	54	11037	54	-9494	3prime_fragment	FALSE	canonical	1	14694	junction_1	77171.7649462332	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1017	113	1129	60.0	-3	True	AAAACA	-5
PB.5039.1	chr17	+	2126	13	full-splice_match	GRN	ENST00000053867.7	2342	13	216	0	0	0	multi-exon	FALSE	canonical	1	1618667	junction_1	488683.78375642875	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	41	1822	20.0	0	True	AATAAA	-15
PB.5039.2	chr17	+	2296	14	novel_in_catalog	GRN	novel	2342	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	4758	junction_1	1103025.2679186913	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	210	1991	20.0	0	True	AATAAA	-16
PB.5039.3	chr17	+	2066	2	novel_not_in_catalog	GRN	novel	2342	13	NA	NA	0	-1348	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.3947.4	chr15	-	2213	7	full-splice_match	CLN6	ENST00000564752.1	900	7	19	-1332	10	-3	multi-exon	FALSE	canonical	1	6605	junction_3	162054.59417293777	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	107	748	20.0	-4	True	AGTAAA	-15
PB.10486.6	chr7	-	2351	2	full-splice_match	KIAA0895	ENST00000493327.1	1509	2	-10	-832	3	-340	multi-exon	FALSE	canonical	1	13033	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	272	1072	15.0	-11	True	ATTAAA	-18
PB.10667.16	chr7	-	1851	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	35	1324	35	-63	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	132	1661	35.0	8456	False	AATATA	-19
PB.10486.4	chr7	-	3684	6	novel_in_catalog	KIAA0895	novel	4153	7	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	1616	junction_5	22514.801625597323	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	321	1148	25.0	-23	True	AATAAA	-23
PB.10486.3	chr7	-	4175	6	full-splice_match	KIAA0895	ENST00000317020.10	4241	6	69	-3	-1	3	multi-exon	FALSE	canonical	1	12629	junction_4	22165.16416361494	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	233	1642	20.0	28	True	AATAAA	-20
PB.3947.1	chr15	-	2170	7	full-splice_match	CLN6	ENST00000249806.10	2243	7	71	2	0	-2	multi-exon	FALSE	canonical	1	290699	junction_6	61445.155235290025	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	89	1024	20.0	14	True	AGTAAA	-16
PB.3947.2	chr15	-	2343	7	full-splice_match	CLN6	ENST00000638076.1	2323	7	16	-36	-8	-2	multi-exon	FALSE	canonical	1	38820	junction_3	151004.36621879146	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	143	658	20.0	-40	True	AGTAAA	-16
PB.10667.13	chr7	-	2356	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	-1	855	-1	406	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	6	NA	TRUE	NA	NA	NA	C	coding	509	1530	168	1697	30.0	8420	False	NA	NA
PB.1103.2	chr1	+	3896	11	full-splice_match	TRAF5	ENST00000261464.9	3972	11	-20	96	-16	65	multi-exon	FALSE	canonical	1	61758	junction_1	53300.37398039529	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	75	1748	20.0	-16	True	TATAAA	-19
PB.4379.1	chr16	+	3715	18	full-splice_match	FBRS	ENST00000356166.10	5200	18	1480	5	-7	0	multi-exon	TRUE	canonical	1	167410	junction_7	98883.0780277506	NA	0	NA	TRUE	NA	NA	NA	A	coding	460	1383	1169	2551	10.0	-11	True	TATAAA	-19
PB.440.3	chr1	-	2560	1	full-splice_match	JUN	ENST00000371222.3	3540	1	280	700	280	-700	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	327	984	990	1973	5.0	-1	True	AATAAA	-22
PB.6513.4	chr2	-	4072	7	novel_in_catalog	SPRED2	novel	4097	6	NA	NA	38	-3	combination_of_known_junctions	FALSE	canonical	1	4772	junction_6	67274.23052947788	NA	1	1	TRUE	NA	NA	NA	C	coding	418	1257	169	1425	15.0	-1	True	TATAAA	-12
PB.6980.1	chr2	+	5609	15	full-splice_match	MAP2	ENST00000199940.10	2241	15	-11	-3357	-11	-243	multi-exon	FALSE	canonical	1	32259	junction_8	118237.05209252558	NA	2	NA	TRUE	NA	NA	NA	C	coding	559	1680	452	2131	80.0	0	True	AATAAA	-34
PB.6980.2	chr2	+	5436	14	novel_in_catalog	MAP2	novel	2241	15	NA	NA	-9	-243	combination_of_known_junctions	FALSE	canonical	1	45835	junction_11	108949.76099411397	NA	3	NA	TRUE	NA	NA	NA	C	coding	502	1509	450	1958	80.0	2	True	AATAAA	-34
PB.1240.10	chr1	-	5875	14	full-splice_match	HNRNPU	ENST00000444376.7	6827	14	15	937	-7	-934	multi-exon	FALSE	canonical	1	1037046	junction_1	1614879.0492050434	NA	1	NA	TRUE	NA	NA	NA	C	coding	806	2421	239	2659	45.0	-4	True	AATAAA	-12
PB.10910.7	chr7	+	2683	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-32	209	-32	-209	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	300	2228	35.0	-11	True	TATAAA	-25
PB.2273.1	chr11	-	5749	4	novel_in_catalog	POU2AF1	novel	3295	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	325693	junction_1	40692.47003507597	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	101	622	5.0	-3	True	AATAAA	-17
PB.5749.2	chr19	+	2635	4	full-splice_match	ZNF791	ENST00000343325.8	4554	4	1	1918	1	1897	multi-exon	FALSE	canonical	1	118090	junction_1	45916.19207740216	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	162	1892	40.0	-17	True	NA	NA
PB.10910.4	chr7	+	3742	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-43	-839	-43	839	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	311	2239	30.0	-22	True	GATAAA	-19
PB.10910.3	chr7	+	4781	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-46	-1875	-46	-462	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	2	NA	TRUE	NA	NA	NA	C	coding	642	1929	314	2242	20.0	-25	True	AATAAA	-17
PB.10910.2	chr7	+	2397	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-59	522	-59	5	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	327	2255	20.0	-1476	False	AATGAA	-26
PB.10910.1	chr7	+	5500	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-82	-2558	-82	221	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	350	2278	90.0	-1499	False	NA	NA
PB.1719.1	chr10	+	2717	14	full-splice_match	DPYSL4	ENST00000338492.8	2729	14	-3	15	-3	-15	multi-exon	FALSE	canonical	1	55266	junction_1	33364.62164075548	NA	1	NA	TRUE	NA	NA	NA	A	coding	572	1719	168	1886	25.0	-6679	False	ATTAAA	-19
PB.5398.10	chr18	-	2378	14	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	15107	junction_11	76806.61137361957	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	628	1653	25.0	-1	True	AATAAA	-21
PB.7519.1	chr21	+	5012	12	novel_not_in_catalog	DYRK1A	novel	2153	12	NA	NA	-160	2	any annotated donor/acceptor	FALSE	canonical	1	1249	junction_1	118282.97623073237	NA	2	NA	TRUE	NA	NA	NA	A	coding	754	2265	105	2369	20.0	1	True	GATAAA	-18
PB.525.8	chr1	-	2155	11	full-splice_match	GBP4	ENST00000355754.6	6127	11	4	3968	4	-2618	multi-exon	FALSE	canonical	1	129336	junction_6	35510.65960187167	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	95	2017	40.0	-2	True	ATTAAA	-12
PB.520.3	chr1	-	1387	7	full-splice_match	GTF2B	ENST00000370500.9	1351	7	-38	2	-11	-2	multi-exon	FALSE	canonical	1	357169	junction_2	88526.11543760532	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	158	1108	25.0	875	False	AATAAA	-17
PB.5398.11	chr18	-	2049	13	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	0	-49	combination_of_known_junctions	FALSE	canonical	1	15107	junction_10	78960.39930595308	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	658	1848	30.0	-2	True	TATAAA	-19
PB.2299.1	chr11	-	3218	9	full-splice_match	BACE1	ENST00000313005.10	6326	9	504	2604	43	-460	multi-exon	FALSE	canonical	1	156938	junction_8	62792.153473657636	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	144	1463	10.0	533	False	AATAAA	-17
PB.440.4	chr1	-	2027	1	full-splice_match	JUN	ENST00000371222.3	3540	1	256	1257	256	-1257	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	327	984	1014	1997	75.0	-3	True	GGGGCT	-12
PB.11186.4	chr8	-	3968	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-14	-1753	-14	-2	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	18	473	20.0	20	True	AATAAA	-22
PB.2299.2	chr11	-	2376	9	full-splice_match	BACE1	ENST00000313005.10	6326	9	128	3822	128	458	multi-exon	FALSE	canonical	1	156938	junction_8	62792.153473657636	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	334	1839	70.0	157	False	TATAAA	-38
PB.5270.2	chr17	-	5351	18	full-splice_match	UBE2O	ENST00000319380.11	5436	18	2	83	2	-83	multi-exon	TRUE	canonical	1	140266	junction_17	61311.09700535458	NA	1	NA	TRUE	NA	NA	NA	A	coding	1292	3879	64	3942	5.0	10001	False	ATTAAA	-15
PB.1981.8	chr11	-	2102	13	novel_not_in_catalog	FADS1	novel	4525	12	NA	NA	113	108	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	291914.21712808026	NA	1	NA	TRUE	NA	NA	NA	A	coding	489	1470	121	1590	85.0	-59	False	NA	NA
PB.7002.2	chr2	-	2143	8	novel_in_catalog	AAMP	novel	1886	11	NA	NA	8	1	intron_retention	FALSE	canonical	1	1191396	junction_7	111338.7672266539	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	52	1212	20.0	-1	True	AATAAA	-16
PB.6644.2	chr2	-	2402	10	novel_in_catalog	ACTR1B	novel	2243	11	NA	NA	92	16	intron_retention	FALSE	canonical	1	266163	junction_9	190849.52453525615	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	126	569	5.0	-74	True	NA	NA
PB.5749.3	chr19	+	2493	4	full-splice_match	ZNF791	ENST00000343325.8	4554	4	2	2059	0	1756	multi-exon	FALSE	canonical	1	118090	junction_1	45916.19207740216	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	161	1891	100.0	-16	True	NA	NA
PB.4365.6	chr16	-	1268	7	full-splice_match	CD2BP2	ENST00000305596.7	3421	7	77	2076	7	5	multi-exon	FALSE	canonical	1	493139	junction_2	156772.6457779616	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	100	1125	5.0	-49	True	AATAAA	-22
PB.4365.5	chr16	-	3300	7	novel_not_in_catalog	CD2BP2	novel	3421	7	NA	NA	-14	-3	any annotated donor/acceptor	FALSE	canonical	1	4351	junction_4	290212.2617742725	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	344	1084	15.0	54	False	NA	NA
PB.4365.3	chr16	-	3438	6	novel_in_catalog	CD2BP2	novel	3421	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	493139	junction_1	171594.6041116678	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	110	1123	25.0	-59	True	NA	NA
PB.4365.2	chr16	-	3346	7	full-splice_match	CD2BP2	ENST00000305596.7	3421	7	74	1	4	-1	multi-exon	FALSE	canonical	1	493139	junction_2	156772.6457779616	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	103	1128	25.0	-52	True	NA	NA
PB.4365.1	chr16	-	3551	5	novel_in_catalog	CD2BP2	novel	3421	7	NA	NA	9	-1	intron_retention	FALSE	canonical	1	493139	junction_1	142523.46031158345	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	508	1236	25.0	-47	True	NA	NA
PB.2273.6	chr11	-	2836	5	novel_not_in_catalog	POU2AF1	novel	3295	5	NA	NA	135	-1	any annotated donor/acceptor	TRUE	canonical	1	236	junction_4	161626.03611945538	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	265	828	5.0	134	False	AATAAA	-16
PB.10766.18	chr7	-	2772	3	incomplete-splice_match	LHFPL3-AS1	ENST00000417290.6	950	4	-15	1061	8	-1051	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	NA	NA
PB.10766.19	chr7	-	1847	3	incomplete-splice_match	LHFPL3-AS1	ENST00000434579.6	1034	5	-14	1998	-14	879	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-23	True	AATAAA	-21
PB.7798.18	chr22	+	3815	7	novel_in_catalog	MIEF1	novel	573	3	NA	NA	-13	-17	intron_retention	FALSE	canonical	1	4788	junction_2	117187.25576330104	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	1120	1977	85.0	-22	True	NA	NA
PB.11919.8	chr9	-	2571	10	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-21	1	intron_retention	FALSE	canonical	1	192692	junction_9	536360.8152576048	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	1428	2468	10.0	-19	True	AATAAA	-18
PB.7798.19	chr22	+	4808	6	full-splice_match	MIEF1	ENST00000433117.6	3838	6	42	-1012	-9	-740	multi-exon	FALSE	canonical	1	99354	junction_4	74876.99412609992	NA	5	NA	TRUE	NA	NA	NA	C	coding	285	858	882	1739	35.0	-18	True	AATAAA	-18
PB.7785.12	chr22	-	2442	2	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	1	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	51	156	337	492	90.0	-33	True	NA	NA
PB.525.1	chr1	-	2369	12	novel_not_in_catalog	GBP4	novel	6127	11	NA	NA	39	-3	any annotated donor/acceptor	FALSE	canonical	1	4054	junction_1	59158.25282359593	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	60	1982	25.0	-16	True	NA	NA
PB.1116.10	chr1	+	3747	8	novel_not_in_catalog	VASH2	novel	1369	9	NA	NA	0	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	30224.7155507285	NA	13	2	TRUE	NA	NA	NA	C	coding	213	642	786	1427	85.0	0	True	NA	NA
PB.7785.10	chr22	-	2719	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	21	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	187097.0013976707	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	104	769	90.0	-1	True	NA	NA
PB.5947.2	chr19	-	1951	5	full-splice_match	ZFP82	ENST00000392161.3	2623	5	14	658	14	-658	multi-exon	FALSE	canonical	1	42261	junction_4	4941.711564579625	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	230	1828	25.0	1	True	ATTAAA	-15
PB.1610.3	chr10	-	2399	9	novel_in_catalog	POLL	novel	2914	2	NA	NA	11	0	intron_retention	FALSE	canonical	1	47398	junction_8	59833.990118363115	NA	0	NA	TRUE	NA	NA	NA	B	coding	575	1728	103	1830	15.0	-101	True	AGTAAA	-16
PB.1610.2	chr10	-	2624	9	novel_not_in_catalog	POLL	novel	2914	2	NA	NA	41	0	intron_retention	TRUE	canonical	1	2195	junction_8	70330.00667167251	NA	0	NA	TRUE	NA	NA	NA	B	coding	575	1728	328	2055	15.0	-10	True	AGTAAA	-16
PB.1610.4	chr10	-	2254	3	incomplete-splice_match	POLL	ENST00000430045.1	1022	4	13	-830	9	117	intron_retention	FALSE	canonical	1	115179	junction_2	17768.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	203	612	860	1471	80.0	-61	True	NA	NA
PB.7785.16	chr22	-	1702	2	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	0	-32	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	145	438	848	1285	80.0	-1	True	NA	NA
PB.2355.1	chr11	+	1458	3	full-splice_match	HYLS1	ENST00000425380.6	2061	3	600	3	-122	1	multi-exon	FALSE	canonical	1	8276	junction_1	31980.5	NA	1	1	TRUE	NA	NA	NA	C	coding	299	900	182	1081	35.0	-3775	False	ATTAAA	-16
PB.1705.6	chr10	-	3089	12	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	2	604	combination_of_known_junctions	FALSE	canonical	1	11471	junction_10	147023.98256033205	NA	7	NA	TRUE	NA	NA	NA	C	coding	445	1338	568	1905	35.0	1	True	AATAAA	-17
PB.1705.7	chr10	-	2318	11	novel_not_in_catalog	CTBP2	novel	6939	11	NA	NA	8	106	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	138913.60562770662	NA	7	1	TRUE	NA	NA	NA	C	coding	445	1338	295	1632	20.0	7	True	AATATA	-16
PB.1705.5	chr10	-	2933	11	full-splice_match	CTBP2	ENST00000411419.6	2036	11	-5	-892	-5	605	multi-exon	FALSE	canonical	1	31980	junction_10	134734.16836159266	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	411	1748	40.0	-2	True	AATAAA	-18
PB.1705.2	chr10	-	3036	12	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	20	620	combination_of_known_junctions	FALSE	canonical	1	134	junction_11	142753.5079449715	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	499	1836	40.0	19	True	AATAAA	-33
PB.2355.2	chr11	+	1394	2	novel_in_catalog	HYLS1	novel	1810	4	NA	NA	-108	1	no_combination_of_known_junctions	FALSE	canonical	1	22315	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	118	1017	35.0	-26	True	ATTAAA	-16
PB.1705.1	chr10	-	3135	10	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	147	1082	combination_of_known_junctions	FALSE	canonical	1	56753	junction_9	138430.3281068776	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	136	1473	40.0	0	True	ATTAAA	-11
PB.6850.25	chr2	-	3464	8	full-splice_match	WIPF1	ENST00000359761.7	2003	8	-35	-1426	-2	-8	multi-exon	FALSE	canonical	1	75247	junction_7	214815.19339380148	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	184	1695	35.0	-40	True	AATAAA	-21
PB.10837.7	chr7	-	2883	7	full-splice_match	UBE2H	ENST00000355621.7	5151	7	205	2063	-22	-2051	multi-exon	FALSE	canonical	1	140291	junction_2	226812.32917283304	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	190	741	50.0	182	False	AATAAA	-16
PB.525.7	chr1	-	3421	12	novel_not_in_catalog	GBP4	novel	6127	11	NA	NA	-10	-2	any annotated donor/acceptor	FALSE	canonical	1	30654	junction_1	53068.34714663755	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	109	2031	90.0	-16	True	NA	NA
PB.6850.20	chr2	-	4453	9	full-splice_match	WIPF1	ENST00000392546.6	2180	9	-7	-2266	-2	-373	multi-exon	FALSE	canonical	1	2390	junction_8	225430.7222060901	NA	5	NA	TRUE	NA	NA	NA	C	coding	503	1512	340	1851	25.0	17	False	AGTAAA	-18
PB.1705.8	chr10	-	2311	12	novel_not_in_catalog	CTBP2	novel	6939	11	NA	NA	-43	67	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	139003.70161769606	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	327	1664	35.0	-2	True	AGTAAA	-44
PB.1705.9	chr10	-	2355	12	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	117	39	combination_of_known_junctions	FALSE	canonical	1	11471	junction_10	145876.62850085637	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	399	1736	85.0	1	True	AGTAAA	-16
PB.7111.37	chr2	-	4609	30	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	15332	junction_28	1089756.1055210417	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	426	4232	40.0	-3	True	AATAAA	-14
PB.10766.13	chr7	-	5688	2	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	20601	-7200	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	coding	99	300	2620	2919	75.0	3956	False	AAGAAA	-35
PB.559.3	chr1	+	1733	9	full-splice_match	SNX7	ENST00000306121.7	1734	9	-1	2	-1	0	multi-exon	FALSE	canonical	1	47351	junction_6	51210.63368761902	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	11	1366	20.0	-1	True	AATAAA	-13
PB.3836.5	chr15	+	1908	2	full-splice_match	TRIM69	ENST00000560141.2	3190	2	131	1151	-10	1134	multi-exon	FALSE	canonical	1	309560	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.3836.4	chr15	+	2450	3	novel_not_in_catalog	TRIM69	novel	2486	8	NA	NA	21	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	154780.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-38	True	NA	NA
PB.7111.34	chr2	-	5254	26	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-43	5	intron_retention	FALSE	canonical	1	286089	junction_25	826423.0240921859	NA	6	1	TRUE	NA	NA	NA	C	coding	875	2628	2245	4872	20.0	-22	True	AATAAA	-19
PB.3836.1	chr15	+	2454	3	novel_not_in_catalog	TRIM69	novel	2486	8	NA	NA	0	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	154780.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	10	33	303	335	15.0	-77	True	NA	NA
PB.11915.2	chr9	-	1611	9	novel_not_in_catalog	AL807752.6	novel	746	4	NA	NA	-5789	-8146	any annotated donor/acceptor	FALSE	canonical	1	113706	junction_2	490059.0347390398	NA	0	NA	TRUE	NA	NA	NA	A	coding	267	804	237	1040	5.0	-49	True	ATTAAA	-20
PB.3836.3	chr15	+	1846	2	full-splice_match	TRIM69	ENST00000560141.2	3190	2	81	1263	9	1022	multi-exon	FALSE	canonical	1	309560	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	10	33	276	308	30.0	-50	True	NA	NA
PB.3836.2	chr15	+	2487	3	novel_not_in_catalog	TRIM69	novel	2486	8	NA	NA	5	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	154780.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	10	33	280	312	15.0	-54	True	NA	NA
PB.3959.5	chr15	-	3486	15	incomplete-splice_match	MYO9A	ENST00000564571.5	8111	42	-300	124781	13	679	3prime_fragment	FALSE	canonical	1	45259	junction_14	18202.24624187905	NA	0	NA	TRUE	NA	NA	NA	B	coding	795	2388	461	2848	25.0	-5	True	TATAAA	-10
PB.3959.4	chr15	-	3579	18	novel_in_catalog	MYO9A	novel	12411	42	NA	NA	2	-11879	intron_retention	FALSE	canonical	1	34117	junction_13	19816.179792905976	NA	0	NA	TRUE	NA	NA	NA	B	coding	882	2649	472	3120	40.0	-16	True	AATAAA	-17
PB.1973.1	chr11	+	2878	4	novel_in_catalog	TMEM138	novel	1848	5	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	286432	junction_1	55816.48626426505	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	185	502	20.0	2	True	AATAAA	-18
PB.10476.5	chr7	+	2193	10	full-splice_match	FKBP9	ENST00000242209.8	3462	10	6	1263	6	59	multi-exon	FALSE	canonical	1	5230	junction_4	248928.44431058675	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	164	1876	40.0	-29	True	ATTAAA	-16
PB.3959.1	chr15	-	6006	30	incomplete-splice_match	MYO9A	ENST00000444904.5	7749	42	71076	51458	0	5663	internal_fragment	TRUE	canonical	1	25921	junction_5	21697.19686344926	NA	2	NA	TRUE	NA	NA	NA	B	coding	1977	5931	74	6004	35.0	NA	False	AATATA	-41
PB.10476.3	chr7	+	3271	9	novel_in_catalog	FKBP9	novel	3621	11	NA	NA	6	-20	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_8	281440.41176275216	NA	2	NA	TRUE	NA	NA	NA	C	coding	477	1434	164	1597	45.0	-29	True	AATAAA	-26
PB.3959.3	chr15	-	4838	25	incomplete-splice_match	MYO9A	ENST00000564571.5	8111	42	-360	71913	-47	-1295	3prime_fragment	FALSE	canonical	1	45259	junction_24	15629.233393119357	NA	2	NA	TRUE	NA	NA	NA	B	coding	1439	4317	521	4837	60.0	21	True	AAAACA	-26
PB.3959.2	chr15	-	6123	25	incomplete-splice_match	MYO9A	ENST00000564571.5	8111	42	-352	70620	-39	-2	3prime_fragment	FALSE	canonical	1	45259	junction_24	15629.233393119357	NA	0	NA	TRUE	NA	NA	NA	B	coding	1681	5046	513	5558	20.0	29	True	NA	NA
PB.5749.7	chr19	+	2777	4	full-splice_match	ZNF791	ENST00000343325.8	4554	4	11	1766	9	-1766	multi-exon	FALSE	canonical	1	118090	junction_1	45916.19207740216	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	152	1882	90.0	-7	True	NA	NA
PB.9130.2	chr5	+	2839	3	antisense	novelGene_AC010451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4449	junction_1	59.5	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	ATTAAA	-25
PB.10476.8	chr7	+	3534	11	novel_not_in_catalog	FKBP9	novel	3621	11	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	455	junction_5	265479.27367387834	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	153	1958	20.0	-18	True	AATAAA	-43
PB.10476.9	chr7	+	3522	10	novel_in_catalog	FKBP9	novel	3621	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	5230	junction_4	286313.233549905	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	153	1709	15.0	-18	True	TATAAA	-16
PB.4942.4	chr17	-	2223	10	novel_in_catalog	CWC25	novel	3234	10	NA	NA	-4	250	intron_retention	FALSE	canonical	1	82364	junction_5	77752.6397695654	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	137	766	35.0	1	True	AAAAAG	-13
PB.4942.5	chr17	-	2185	11	novel_in_catalog	CWC25	novel	3234	10	NA	NA	7	250	combination_of_known_junctions	FALSE	canonical	1	13914	junction_6	106238.57219018899	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	166	843	35.0	-28	True	AAAAAG	-13
PB.4942.6	chr17	-	2046	10	full-splice_match	CWC25	ENST00000614790.4	3234	10	147	1041	-19	250	multi-exon	FALSE	canonical	1	217657	junction_5	47422.92983591611	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	152	1429	35.0	-14	True	AAAAAG	-13
PB.4942.1	chr17	-	3067	10	full-splice_match	CWC25	ENST00000614790.4	3234	10	156	11	-10	-11	multi-exon	FALSE	canonical	1	217657	junction_5	47422.92983591611	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	143	1420	30.0	-5	True	AATAAA	-26
PB.4942.2	chr17	-	2317	10	full-splice_match	CWC25	ENST00000614790.4	3234	10	157	760	-9	531	multi-exon	FALSE	canonical	1	217657	junction_5	47422.92983591611	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	142	1419	10.0	-4	True	AATAAA	-13
PB.4942.3	chr17	-	2516	10	novel_in_catalog	CWC25	novel	3234	10	NA	NA	-16	531	intron_retention	FALSE	canonical	1	82364	junction_5	77752.6397695654	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	149	778	10.0	-11	True	AATAAA	-13
PB.9130.4	chr5	+	3614	2	antisense	novelGene_AC010451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4285	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	ATTAAA	-23
PB.9130.5	chr5	+	4556	1	antisense	novelGene_AC010451.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	ATTAAA	-19
PB.4730.1	chr17	+	2467	21	novel_in_catalog	ACAP1	novel	2512	22	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	1	17584	junction_1	123058.25034359745	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	388	2385	5.0	-17	True	ATTAAA	-21
PB.4730.2	chr17	+	2508	22	full-splice_match	ACAP1	ENST00000158762.7	2512	22	3	1	3	0	multi-exon	FALSE	canonical	1	230139	junction_1	96591.67840252483	NA	1	NA	TRUE	NA	NA	NA	C	coding	740	2223	204	2426	5.0	0	True	ATTAAA	-21
PB.6505.7	chr2	+	2509	2	incomplete-splice_match	AFTPH	ENST00000498706.5	4674	9	-163	38432	59	-38194	3prime_fragment	FALSE	canonical	1	226019	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	282	2246	85.0	16	True	TATAAA	-14
PB.8440.9	chr3	-	1817	13	full-splice_match	TFDP2	ENST00000489671.5	9857	13	-22	8062	1	6	multi-exon	FALSE	canonical	1	92807	junction_12	149456.45430628132	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	454	1794	25.0	-20	True	AATAAA	-23
PB.9383.7	chr5	+	2375	8	novel_not_in_catalog	SLC25A46	novel	558	8	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	canonical	1	499	junction_5	159054.09818918692	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	101	1375	15.0	13	True	ATTAAA	-12
PB.7241.1	chr20	-	2141	12	novel_in_catalog	NECAB3	novel	462	6	NA	NA	0	0	intron_retention	TRUE	canonical	1	36836	junction_11	134320.8846856187	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	57	725	5.0	19	True	AATAAA	-17
PB.208.4	chr1	+	3023	7	incomplete-splice_match	WDTC1	ENST00000319394.7	4819	16	61808	390	8615	-1	5prime_fragment	FALSE	canonical	1	230824	junction_4	103423.20069447129	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	96	1163	5.0	NA	False	ATTAAA	-16
PB.7241.2	chr20	-	1898	13	full-splice_match	NECAB3	ENST00000375238.8	1942	13	43	1	0	0	multi-exon	FALSE	canonical	1	36836	junction_12	128615.93524745054	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	69	1157	5.0	7	True	AATAAA	-17
PB.4720.2	chr17	+	1376	4	novel_in_catalog	RNASEK-C17orf49	novel	1856	7	NA	NA	1327	2	intron_retention	FALSE	canonical	1	960389	junction_1	117077.26372784769	NA	0	NA	TRUE	NA	NA	NA	A	coding	140	423	697	1119	15.0	-8	True	AATAAA	-16
PB.4720.1	chr17	+	2542	2	incomplete-splice_match	C17orf49	ENST00000439424.6	850	6	16	-2	16	1	intron_retention	FALSE	canonical	1	700243	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	112	339	1393	1731	15.0	16	True	AATAAA	-16
PB.7899.4	chr22	+	2869	3	full-splice_match	RPL23AP82	ENST00000462238.5	1009	3	11	-1871	-7	-4	multi-exon	FALSE	canonical	1	133122	junction_1	54217.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	121	366	341	706	30.0	-39	False	NA	NA
PB.7899.5	chr22	+	3018	3	novel_in_catalog	RPL23AP82	novel	1112	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	1112	junction_1	120222.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	121	366	489	854	35.0	-30	False	NA	NA
PB.7899.6	chr22	+	3052	3	full-splice_match	RPL23AP82	ENST00000480246.1	2987	3	-68	3	-3	-3	multi-exon	FALSE	canonical	1	454	junction_1	120551.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	523	888	35.0	-13	True	NA	NA
PB.7899.1	chr22	+	3103	4	novel_in_catalog	RPL23AP82	novel	1112	4	NA	NA	224	-3	combination_of_known_junctions	FALSE	canonical	1	1928	junction_1	111192.40285499125	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	574	939	35.0	NA	False	NA	NA
PB.7899.2	chr22	+	6874	4	novel_in_catalog	RPL23AP82	novel	1112	4	NA	NA	274	3818	combination_of_known_junctions	FALSE	canonical	1	1928	junction_1	111192.40285499125	NA	3	NA	TRUE	NA	NA	NA	C	coding	121	366	524	889	40.0	NA	False	NA	NA
PB.7899.3	chr22	+	3430	3	novel_not_in_catalog	RPL23AP82	novel	1112	4	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	611	junction_1	120473.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	121	366	901	1266	35.0	-39	False	NA	NA
PB.3484.10	chr14	+	3849	15	full-splice_match	HIF1A	ENST00000394997.5	3922	15	-27	100	0	-100	multi-exon	FALSE	canonical	1	266161	junction_1	401542.82845132955	NA	3	1	TRUE	NA	NA	NA	C	coding	827	2484	293	2776	35.0	-7	True	AGTAAA	-19
PB.3484.11	chr14	+	3522	14	full-splice_match	HIF1A	ENST00000323441.10	3555	14	-264	297	0	190	multi-exon	FALSE	canonical	1	80990	junction_13	502880.0561650777	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	293	2500	80.0	-7	True	TATAAA	-20
PB.3484.12	chr14	+	3038	10	incomplete-splice_match	HIF1A	ENST00000337138.8	3919	15	-27	8675	0	-1315	3prime_fragment	FALSE	canonical	1	752255	junction_1	341253.92297225044	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	293	1846	55.0	-7	True	AATATA	-33
PB.3484.13	chr14	+	3527	13	novel_in_catalog	HIF1A	novel	559	3	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	6243	junction_9	655366.0683705498	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	288	1541	15.0	-2	True	AATAAA	-19
PB.3484.14	chr14	+	1606	10	incomplete-splice_match	HIF1A	ENST00000337138.8	3919	15	-20	10100	7	-2740	3prime_fragment	FALSE	canonical	1	752255	junction_1	341253.92297225044	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1320	286	1605	65.0	0	True	NA	NA
PB.3484.15	chr14	+	3493	15	full-splice_match	HIF1A	ENST00000394997.5	3922	15	132	297	-105	190	multi-exon	FALSE	canonical	1	266161	junction_1	401542.82845132955	NA	3	1	TRUE	NA	NA	NA	C	coding	827	2484	134	2617	80.0	-2040	False	TATAAA	-20
PB.7340.7	chr20	+	5809	39	full-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-179	3222	-179	-3222	multi-exon	FALSE	canonical	1	114682	junction_1	51313.882148116645	NA	0	NA	TRUE	NA	NA	NA	C	coding	1785	5358	180	5537	20.0	-17	True	ATTAAA	-14
PB.7340.6	chr20	+	8326	39	full-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-179	705	-179	-705	multi-exon	FALSE	canonical	1	114682	junction_1	51313.882148116645	NA	2	NA	TRUE	NA	NA	NA	C	coding	1785	5358	180	5537	75.0	-17	True	NA	NA
PB.1963.1	chr11	-	1588	9	full-splice_match	TCN1	ENST00000257264.3	1582	9	-15	9	-15	-9	multi-exon	FALSE	canonical	1	99802	junction_5	17377.284975201823	NA	0	NA	TRUE	NA	NA	NA	A	coding	433	1302	121	1422	50.0	-104	False	AATAAA	-25
PB.11627.4	chr9	-	4476	26	full-splice_match	AGTPBP1	ENST00000357081.7	4393	26	-82	-1	61	-1	multi-exon	FALSE	canonical	1	93391	junction_25	64220.69982220998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1226	3681	228	3908	15.0	-43	True	AATAAA	-18
PB.5492.1	chr18	-	3667	11	full-splice_match	FECH	ENST00000262093.9	3853	11	157	29	-3	-29	multi-exon	FALSE	canonical	1	193075	junction_10	135491.80527917546	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	17	1267	30.0	0	True	AATAAA	-12
PB.5492.3	chr18	-	2736	11	full-splice_match	FECH	ENST00000262093.9	3853	11	70	1047	-1	180	multi-exon	FALSE	canonical	1	193075	junction_10	135491.80527917546	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	83	1354	25.0	-24	True	AATAAA	-24
PB.5492.2	chr18	-	3807	11	full-splice_match	FECH	ENST00000382873.7	2526	11	-76	-1205	-29	-22	multi-exon	FALSE	canonical	1	33069	junction_9	175148.49165633714	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	132	1400	30.0	1	True	AATAAA	-19
PB.5492.5	chr18	-	2441	11	full-splice_match	FECH	ENST00000262093.9	3853	11	126	1286	8	-59	multi-exon	FALSE	canonical	1	193075	junction_10	135491.80527917546	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	48	1298	20.0	-1	True	AATATA	-17
PB.5492.4	chr18	-	2787	11	full-splice_match	FECH	ENST00000382873.7	2526	11	-81	-180	-34	180	multi-exon	FALSE	canonical	1	33069	junction_9	175148.49165633714	NA	2	NA	TRUE	NA	NA	NA	C	coding	422	1269	137	1405	25.0	-4	True	AATAAA	-24
PB.5492.7	chr18	-	2302	11	full-splice_match	FECH	ENST00000262093.9	3853	11	40	1511	-31	-284	multi-exon	FALSE	canonical	1	193075	junction_10	135491.80527917546	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	134	1384	30.0	-1	True	TATAAA	-20
PB.5492.6	chr18	-	2590	11	full-splice_match	FECH	ENST00000382873.7	2526	11	-121	57	-3	-57	multi-exon	FALSE	canonical	1	33069	junction_9	175148.49165633714	NA	2	1	TRUE	NA	NA	NA	C	coding	422	1269	177	1445	15.0	173	False	AATATA	-19
PB.8440.7	chr3	-	2299	11	novel_in_catalog	TFDP2	novel	9857	13	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	1	175999	junction_10	106594.76231297672	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	150	1307	45.0	-1	True	AAGAAA	-11
PB.8440.6	chr3	-	2402	12	novel_in_catalog	TFDP2	novel	9857	13	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	1	21151	junction_9	181355.82209230796	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	136	1410	45.0	-1	True	AAGAAA	-11
PB.9291.3	chr5	+	3450	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	1	236	1	-236	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	255	1811	50.0	-31	True	AATAAA	-42
PB.8440.5	chr3	-	2824	14	full-splice_match	TFDP2	ENST00000467072.5	1853	14	-11	-960	1	-19	multi-exon	FALSE	canonical	1	25003	junction_10	186734.83698844357	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	672	1832	45.0	-20	True	AAGAAA	-11
PB.272.1	chr1	+	4254	8	full-splice_match	ZSCAN20	ENST00000361328.7	4316	8	-54	116	-54	-116	multi-exon	FALSE	canonical	1	3979	junction_1	6802.479583930842	NA	0	NA	TRUE	NA	NA	NA	C	coding	1043	3132	208	3339	30.0	-60	False	ATTAAA	-16
PB.7167.2	chr20	+	1939	7	full-splice_match	CRLS1	ENST00000378863.8	3958	7	2	2017	-1	643	multi-exon	FALSE	canonical	1	247368	junction_1	278922.24628345005	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	489	1061	55.0	-1	True	AATAAA	-9
PB.7167.1	chr20	+	1311	7	full-splice_match	CRLS1	ENST00000378863.8	3958	7	-15	2662	-15	0	multi-exon	FALSE	canonical	1	247368	junction_1	278922.24628345005	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	515	1078	25.0	12	True	AATAAA	-20
PB.5600.2	chr19	+	2421	4	full-splice_match	ZNF555	ENST00000334241.8	8557	4	32	6104	23	171	multi-exon	FALSE	canonical	1	32659	junction_3	4158.101516584488	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	107	1993	5.0	-8	True	AATGAA	-17
PB.5600.1	chr19	+	2160	4	full-splice_match	ZNF555	ENST00000334241.8	8557	4	32	6365	23	-90	multi-exon	FALSE	canonical	1	32659	junction_3	4158.101516584488	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	107	1993	30.0	-8	True	NA	NA
PB.4051.10	chr15	+	2341	19	incomplete-splice_match	PDE8A	ENST00000394553.5	3912	22	-78	15954	-78	5350	3prime_fragment	FALSE	canonical	1	81815	junction_1	50774.908607852776	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2073	268	2340	50.0	40	True	NA	NA
PB.7664.4	chr22	+	3484	4	full-splice_match	SNRPD3	ENST00000215829.7	1763	4	472	-2193	17	2193	multi-exon	FALSE	canonical	1	2043240	junction_3	644067.5154869677	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	116	496	45.0	0	True	NA	NA
PB.7664.5	chr22	+	659	4	full-splice_match	SNRPD3	ENST00000215829.7	1763	4	489	615	-15	-615	multi-exon	FALSE	canonical	1	2043240	junction_3	644067.5154869677	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	99	479	35.0	-7	True	AATAAA	-43
PB.7664.2	chr22	+	3060	4	full-splice_match	SNRPD3	ENST00000215829.7	1763	4	470	-1767	15	1767	multi-exon	FALSE	canonical	1	2043240	junction_3	644067.5154869677	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	118	498	5.0	-2	True	NA	NA
PB.7664.3	chr22	+	1915	5	novel_not_in_catalog	SNRPD3	novel	1763	4	NA	NA	15	2192	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1387927.6319075502	NA	1	1	TRUE	NA	NA	NA	C	coding	126	381	118	498	50.0	-2	True	NA	NA
PB.6305.11	chr2	-	2772	19	full-splice_match	ADAM17	ENST00000310823.8	4391	19	-9	1628	-9	245	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	235	2709	25.0	14	False	NA	NA
PB.7664.1	chr22	+	1126	4	full-splice_match	SNRPD3	ENST00000215829.7	1763	4	463	174	8	-174	multi-exon	FALSE	canonical	1	2043240	junction_3	644067.5154869677	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	125	505	65.0	-5125	False	NA	NA
PB.9291.8	chr5	+	4737	13	full-splice_match	UTP15	ENST00000296792.8	3687	13	13	-1063	0	-345	multi-exon	FALSE	canonical	1	111692	junction_1	40701.688735440286	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	243	1799	50.0	-19	True	NA	NA
PB.9291.9	chr5	+	4445	10	novel_in_catalog	UTP15	novel	577	4	NA	NA	-3	1	intron_retention	FALSE	canonical	1	179689	junction_1	26306.10705605154	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	3038	4024	35.0	-3	True	AAAACA	-11
PB.11299.3	chr8	-	3625	10	full-splice_match	NUDCD1	ENST00000239690.8	4217	10	262	330	-5	-330	multi-exon	FALSE	canonical	1	240282	junction_6	47067.94576270551	NA	3	NA	TRUE	NA	NA	NA	C	coding	583	1752	114	1865	25.0	-37	True	NA	NA
PB.2149.11	chr11	-	4435	19	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	-25	-21	combination_of_known_junctions	FALSE	canonical	1	9326	junction_3	72944.88606968371	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	410	2203	70.0	-8	True	TATAAA	-7
PB.2149.10	chr11	-	4493	19	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	-24	-21	no_combination_of_known_junctions	FALSE	canonical	1	3728	junction_7	74456.04009069817	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	409	2469	70.0	-7	True	TATAAA	-7
PB.11463.5	chr9	+	3862	9	full-splice_match	SNAPC3	ENST00000380821.7	5680	9	150	1668	-15	6	multi-exon	FALSE	canonical	1	307315	junction_6	53110.426759812195	NA	2	NA	TRUE	NA	NA	NA	C	coding	411	1236	27	1262	10.0	-22	True	TATAAA	-22
PB.11463.4	chr9	+	2310	10	novel_not_in_catalog	SNAPC3	novel	5680	9	NA	NA	-20	-1429	any annotated donor/acceptor	FALSE	canonical	1	3448	junction_9	126494.11694132433	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	32	1267	65.0	-27	True	NA	NA
PB.2149.15	chr11	-	4061	20	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	-14	-324	combination_of_known_junctions	FALSE	canonical	1	8979	junction_19	71238.48530727858	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	181	2340	15.0	1151	False	ATTAAA	-38
PB.2149.14	chr11	-	4143	20	full-splice_match	FCHSD2	ENST00000409418.8	3154	20	185	-1174	-30	-324	multi-exon	FALSE	canonical	1	203595	junction_19	37758.53312183175	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	200	2422	15.0	-11	True	ATTAAA	-38
PB.2149.17	chr11	-	3683	20	full-splice_match	FCHSD2	ENST00000409418.8	3154	20	279	-808	64	-690	multi-exon	FALSE	canonical	1	203595	junction_19	37758.53312183175	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	106	2328	35.0	-1	True	AAGAAA	-17
PB.2149.16	chr11	-	3708	20	novel_in_catalog	FCHSD2	novel	4340	19	NA	NA	-21	-684	combination_of_known_junctions	FALSE	canonical	1	8979	junction_19	71238.48530727858	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	188	2347	25.0	1144	False	AAGAAA	-23
PB.2149.18	chr11	-	2315	16	incomplete-splice_match	FCHSD2	ENST00000409418.8	3154	20	-28	4709	-28	1	3prime_fragment	FALSE	canonical	1	203595	junction_15	39877.98373650414	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	413	2128	25.0	-11	True	AGTAAA	-14
PB.6403.4	chr2	+	2225	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	1	9723	1	-491	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	246	980	25.0	1	True	NA	NA
PB.11463.9	chr9	+	3013	9	full-splice_match	SNAPC3	ENST00000380821.7	5680	9	159	2508	-6	-834	multi-exon	FALSE	canonical	1	307315	junction_6	53110.426759812195	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	18	1253	25.0	-13	True	AATAAA	-21
PB.11463.8	chr9	+	2423	9	full-splice_match	SNAPC3	ENST00000380821.7	5680	9	168	3089	3	-1415	multi-exon	FALSE	canonical	1	307315	junction_6	53110.426759812195	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	9	1244	75.0	-4	True	NA	NA
PB.5131.1	chr17	+	3875	11	full-splice_match	AKAP1	ENST00000337714.7	3970	11	88	7	88	0	multi-exon	FALSE	canonical	1	60999	junction_1	187197.79367300245	NA	4	NA	TRUE	NA	NA	NA	C	coding	903	2712	146	2857	25.0	-1	True	CATAAA	-15
PB.4053.12	chr15	+	3237	21	novel_in_catalog	AKAP13	novel	13215	37	NA	NA	51	-903	combination_of_known_junctions	FALSE	canonical	1	60823	junction_1	113212.02904236813	NA	2	1	TRUE	NA	NA	NA	C	coding	1042	3126	111	3236	75.0	-13	True	NA	NA
PB.4053.11	chr15	+	1938	9	novel_in_catalog	AKAP13	novel	5459	15	NA	NA	-345	-13	combination_of_known_junctions	FALSE	canonical	1	19413	junction_1	104788.99614344056	NA	2	NA	TRUE	NA	NA	NA	C	coding	399	1197	742	1938	50.0	-114	False	AATAAA	-13
PB.5131.2	chr17	+	2582	11	novel_not_in_catalog	AKAP1	novel	650	2	NA	NA	56	0	intron_retention	FALSE	non_canonical	0	0	junction_1	201939.3312454263	NA	1	NA	TRUE	NA	NA	NA	C	coding	775	2328	9	2336	90.0	0	True	NA	NA
PB.4053.17	chr15	+	3149	20	incomplete-splice_match	AKAP13	ENST00000560579.5	4290	30	58083	903	81	-903	internal_fragment	FALSE	canonical	1	168487	junction_5	96088.89519090284	NA	1	1	TRUE	NA	NA	NA	C	coding	1043	3129	20	3148	75.0	-17	True	NA	NA
PB.4053.16	chr15	+	7943	21	incomplete-splice_match	AKAP13	ENST00000560579.5	4290	30	58068	-4678	66	0	5prime_fragment	FALSE	canonical	1	168487	junction_5	95972.93853732938	NA	2	1	TRUE	NA	NA	NA	C	coding	1076	3231	35	3265	10.0	4	True	AATAAA	-15
PB.4053.15	chr15	+	3136	21	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	-1325	-903	any annotated donor/acceptor	FALSE	canonical	1	538	junction_1	119373.58617114594	NA	1	1	TRUE	NA	NA	NA	C	coding	970	2910	226	3135	75.0	-1423	False	NA	NA
PB.5131.6	chr17	+	3716	11	full-splice_match	AKAP1	ENST00000337714.7	3970	11	143	111	143	-104	multi-exon	FALSE	canonical	1	60999	junction_1	187197.79367300245	NA	19	1	TRUE	NA	NA	NA	C	coding	903	2712	91	2802	30.0	-597	False	AAAAAG	-7
PB.11207.3	chr8	+	675	4	full-splice_match	FABP5	ENST00000297258.10	851	4	173	3	173	-3	multi-exon	FALSE	canonical	1	705	junction_1	35.393031329156685	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	61	468	25.0	0	True	AATAAA	-18
PB.4053.19	chr15	+	3044	20	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	-2707	-903	any annotated donor/acceptor	FALSE	canonical	1	2825	junction_1	120294.76375497092	NA	0	NA	TRUE	NA	NA	NA	C	coding	936	2808	236	3043	75.0	-281	False	NA	NA
PB.4053.18	chr15	+	3121	20	novel_in_catalog	AKAP13	novel	13215	37	NA	NA	98	-908	combination_of_known_junctions	FALSE	canonical	1	195190	junction_5	93546.4915798719	NA	2	NA	TRUE	NA	NA	NA	C	coding	1039	3117	3	3119	70.0	0	True	NA	NA
PB.11020.2	chr8	+	3368	13	incomplete-splice_match	PPP3CC	ENST00000240139.9	2189	14	-66	3	-66	-3	intron_retention	FALSE	canonical	1	144996	junction_12	60580.04652586848	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	394	1764	20.0	-254	False	AATAAA	-18
PB.11207.2	chr8	+	3700	2	novel_in_catalog	FABP5	novel	851	4	NA	NA	172	-4	intron_retention	FALSE	canonical	1	778	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-17
PB.7372.1	chr20	+	2362	12	full-splice_match	RAE1	ENST00000395841.6	2639	12	231	46	-11	-46	multi-exon	FALSE	canonical	1	407803	junction_1	134038.42137786865	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	190	1296	80.0	-14	True	NA	NA
PB.6768.18	chr2	-	2736	3	full-splice_match	ZEB2	ENST00000465070.5	2949	3	213	0	0	0	multi-exon	FALSE	canonical	1	17255	junction_1	69871.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-19
PB.1868.2	chr11	-	3414	17	novel_not_in_catalog	KIF18A	novel	3568	17	NA	NA	-29	1	any annotated donor/acceptor	FALSE	canonical	1	1687	junction_16	37005.49969087154	NA	2	NA	TRUE	NA	NA	NA	C	coding	898	2697	137	2833	10.0	-19	True	ATTAAA	-19
PB.7372.6	chr20	+	1656	12	full-splice_match	RAE1	ENST00000395841.6	2639	12	229	754	-13	-6	multi-exon	FALSE	canonical	1	407803	junction_1	134038.42137786865	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	192	1298	5.0	-16	True	AATAAA	-18
PB.8124.2	chr3	-	2086	15	novel_in_catalog	TRAIP	novel	2028	15	NA	NA	0	-6	combination_of_known_junctions	TRUE	canonical	1	9166	junction_11	27888.180554452727	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	432	1610	85.0	-2	True	NA	NA
PB.1868.1	chr11	-	3557	18	novel_not_in_catalog	KIF18A	novel	3568	17	NA	NA	-22	1	any annotated donor/acceptor	FALSE	canonical	1	1948	junction_13	45002.81142582509	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	1039	2976	10.0	-12	True	ATTAAA	-19
PB.1868.6	chr11	-	2999	17	full-splice_match	KIF18A	ENST00000263181.6	3568	17	165	404	2	-404	multi-exon	FALSE	canonical	1	89250	junction_15	21933.777863719693	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	127	2823	75.0	12	True	AATGAA	-28
PB.1868.7	chr11	-	3066	17	novel_not_in_catalog	KIF18A	novel	3568	17	NA	NA	20	-404	any annotated donor/acceptor	FALSE	canonical	1	797	junction_16	37180.033729844086	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	194	2890	75.0	30	True	AATGAA	-28
PB.1868.4	chr11	-	3419	17	full-splice_match	KIF18A	ENST00000263181.6	3568	17	149	0	-14	0	multi-exon	FALSE	canonical	1	89250	junction_15	21933.777863719693	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	143	2839	10.0	-4	True	ATTAAA	-18
PB.1868.5	chr11	-	3167	18	novel_not_in_catalog	KIF18A	novel	3568	17	NA	NA	-37	-404	any annotated donor/acceptor	FALSE	canonical	1	1948	junction_13	45002.81142582509	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	1054	2991	75.0	-27	True	AATGAA	-28
PB.6246.2	chr19	+	2019	4	full-splice_match	ZNF773	ENST00000598770.5	2019	4	0	0	0	0	multi-exon	FALSE	canonical	1	107	junction_2	15638.24110598404	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	147	1472	100.0	-3	True	NA	NA
PB.7372.4	chr20	+	4865	11	full-splice_match	RAE1	ENST00000527947.5	1503	11	-13	-3349	-13	-8	multi-exon	FALSE	canonical	1	407803	junction_1	140549.62842227652	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	192	1505	5.0	-16	True	AATAAA	-16
PB.4198.1	chr16	+	2070	7	full-splice_match	ZNF205	ENST00000382192.7	2062	7	-10	2	-10	0	multi-exon	FALSE	canonical	1	21950	junction_1	39598.90264227308	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	216	1880	25.0	-36	False	ATTAAA	-14
PB.4198.2	chr16	+	2730	6	novel_in_catalog	ZNF205	novel	2062	7	NA	NA	0	15	intron_retention	FALSE	canonical	1	97873	junction_1	14630.136630940944	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	859	2523	0.0	-13	True	ATTAAA	-31
PB.1263.2	chr10	-	3102	1	novel_in_catalog	DIP2C	novel	7888	37	NA	NA	54654	-266951	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	101	306	2098	2403	50.0	568	False	NA	NA
PB.1263.1	chr10	-	6697	38	novel_in_catalog	DIP2C	novel	7749	36	NA	NA	-73	-1294	combination_of_known_junctions	TRUE	canonical	1	17558	junction_7	30244.727369062635	NA	1	NA	TRUE	NA	NA	NA	B	coding	1566	4701	164	4864	100.0	145	False	NA	NA
PB.1327.10	chr10	+	2778	2	incomplete-splice_match	COMMD3	ENST00000483684.1	722	6	-1493	1029	5	-4	intron_retention	FALSE	canonical	1	1015104	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	178	537	28	564	30.0	-18	True	AATAAA	-19
PB.6768.15	chr2	-	2740	8	incomplete-splice_match	ZEB2	ENST00000637267.2	2677	9	910	-626	-28	355	5prime_fragment	FALSE	canonical	1	156997	junction_7	52111.05736162853	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2460	279	2738	65.0	-29	True	NA	NA
PB.4758.1	chr17	-	2716	5	novel_not_in_catalog	HES7	novel	1674	4	NA	NA	-2443	-462	any annotated donor/acceptor	FALSE	canonical	1	4832	junction_3	7542.844075678617	NA	1	NA	TRUE	NA	NA	NA	A	coding	105	318	1	318	75.0	436	False	NA	NA
PB.11549.8	chr9	+	3834	2	novel_not_in_catalog	DCAF10	novel	3862	7	NA	NA	243	-55666	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	180	543	71	613	80.0	0	True	NA	NA
PB.6768.13	chr2	-	1793	1	novel_in_catalog	ZEB2	novel	1414	2	NA	NA	6752	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	107	324	37	360	40.0	9955	False	AATAAA	-15
PB.911.9	chr1	+	3411	21	novel_in_catalog	DCAF6	novel	724	5	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	1	22278	junction_10	277681.1736575735	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	1785	3011	25.0	-29	True	ATTAAA	-21
PB.7808.2	chr22	+	2520	10	full-splice_match	XPNPEP3	ENST00000357137.8	7988	10	-36	5504	-15	-194	multi-exon	FALSE	canonical	1	72886	junction_6	7381.150719949924	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	121	1644	60.0	3	True	NA	NA
PB.11398.1	chr8	+	2199	13	novel_not_in_catalog	HSF1	novel	2105	13	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	29937	junction_8	395167.83417393954	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	179	1078	10.0	-25	False	TATAAA	-17
PB.7808.3	chr22	+	5489	3	novel_not_in_catalog	XPNPEP3	novel	582	3	NA	NA	-10	-3536	any annotated donor/acceptor	FALSE	canonical	1	8651	junction_1	17038.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	9	30	358	387	20.0	-5185	False	AATAAA	-23
PB.911.1	chr1	+	3273	21	novel_in_catalog	DCAF6	novel	724	5	NA	NA	-13	4	combination_of_known_junctions	FALSE	canonical	1	2590	junction_1	285711.3862684641	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	1692	2918	15.0	-619	False	AATAAA	-19
PB.911.3	chr1	+	2953	19	novel_not_in_catalog	DCAF6	novel	724	5	NA	NA	-37	-1	any annotated donor/acceptor	FALSE	canonical	1	2955	junction_1	271485.0880875719	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	414	2555	25.0	-256	False	ATTAAA	-19
PB.911.2	chr1	+	3363	11	incomplete-splice_match	DCAF6	ENST00000470721.5	2803	12	-55	2815	-43	1274	3prime_fragment	FALSE	canonical	1	22278	junction_10	63765.51683786465	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	295	1713	30.0	-262	False	AATAAA	-12
PB.911.5	chr1	+	3308	20	novel_in_catalog	DCAF6	novel	724	5	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	1	1748	junction_11	285104.44295214454	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	251	1669	5.0	-34	True	AATAAA	-16
PB.911.4	chr1	+	2338	15	incomplete-splice_match	DCAF6	ENST00000312263.10	3186	19	-65	12172	-18	-305	3prime_fragment	FALSE	canonical	1	142654	junction_7	237109.38737727905	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	270	2336	65.0	-237	False	NA	NA
PB.911.7	chr1	+	3020	19	full-splice_match	DCAF6	ENST00000312263.10	3186	19	173	-7	63	0	multi-exon	FALSE	canonical	1	142654	junction_7	260672.0385755553	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	32	2614	30.0	1	True	ATTAAA	-27
PB.911.6	chr1	+	3448	21	novel_in_catalog	DCAF6	novel	724	5	NA	NA	10	-1	combination_of_known_junctions	TRUE	canonical	1	85404	junction_10	269234.9972229604	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	230	3043	30.0	-13	True	ATTAAA	-26
PB.11240.4	chr8	-	3141	16	novel_in_catalog	RAD54B	novel	3068	15	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	1	5144	junction_12	29061.997890639857	NA	1	NA	TRUE	NA	NA	NA	C	coding	717	2154	780	2933	35.0	-24	False	AATAAA	-19
PB.3724.35	chr15	+	3126	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	504	1586	20.0	-15	True	AATAAA	-24
PB.5125.8	chr17	-	2050	1	novel_in_catalog	MMD	novel	2735	7	NA	NA	10	227	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	102	309	432	740	20.0	-7	True	AATACA	-23
PB.5125.9	chr17	-	1864	1	novel_in_catalog	MMD	novel	2735	7	NA	NA	23	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	102	309	487	795	85.0	-1	True	NA	NA
PB.12371.1	chrY	+	1947	8	novel_not_in_catalog	PLCXD1	novel	5287	8	NA	NA	-81	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	176.97688076845125	NA	0	NA	TRUE	NA	NA	NA	B	coding	323	972	326	1297	45.0	NA	False	AATAAA	-18
PB.12371.2	chrX	+	1722	8	novel_not_in_catalog	PLCXD1	novel	5287	8	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1630.9315855469517	NA	0	NA	TRUE	NA	NA	NA	B	coding	323	972	57	1028	45.0	1954	False	AATAAA	-18
PB.11478.10	chr9	+	5686	43	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	286	-3	no_combination_of_known_junctions	FALSE	canonical	1	7261	junction_4	61160.86673771754	NA	0	NA	TRUE	NA	NA	NA	B	coding	1766	5301	63	5363	5.0	5	True	AGTAAA	-16
PB.5125.2	chr17	-	4909	6	novel_in_catalog	MMD	novel	2735	7	NA	NA	-18	-4	intron_retention	FALSE	canonical	1	187143	junction_3	42841.21810779894	NA	3	NA	TRUE	NA	NA	NA	C	coding	149	450	248	697	30.0	26	False	AATAAA	-19
PB.5125.3	chr17	-	2799	8	full-splice_match	MMD	ENST00000649377.1	2641	8	-132	-26	25	-4	multi-exon	FALSE	canonical	1	9091	junction_4	114149.15875006236	NA	6	1	TRUE	NA	NA	NA	C	coding	269	810	273	1082	30.0	1	True	AATAAA	-19
PB.5125.1	chr17	-	2650	7	full-splice_match	MMD	ENST00000262065.7	2735	7	82	3	14	-3	multi-exon	FALSE	canonical	1	187143	junction_4	40945.85456836056	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	216	932	30.0	-3	True	AATAAA	-20
PB.5125.6	chr17	-	2282	7	full-splice_match	MMD	ENST00000262065.7	2735	7	23	430	23	-400	multi-exon	FALSE	canonical	1	187143	junction_4	40945.85456836056	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	275	991	20.0	-1	True	AATAAA	-18
PB.5125.7	chr17	-	2298	1	novel_in_catalog	MMD	novel	2735	7	NA	NA	25	422	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	102	309	485	793	60.0	1	True	AATAAA	-11
PB.5125.4	chr17	-	2510	5	novel_in_catalog	MMD	novel	2735	7	NA	NA	-27	-7	no_combination_of_known_junctions	FALSE	canonical	1	517	junction_2	122062.15596444091	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	257	796	20.0	17	True	AATAAA	-16
PB.11226.13	chr8	-	4251	15	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	canonical	1	12241	junction_14	142518.72840417808	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	137	2155	15.0	-32	True	NA	NA
PB.5893.12	chr19	+	8214	2	novel_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-1	intron_retention	FALSE	canonical	1	97128	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	785	1702	20.0	0	True	NA	NA
PB.5893.13	chr19	+	3165	2	novel_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	0	no_combination_of_known_junctions	FALSE	canonical	1	10450	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1151	1537	20.0	0	True	NA	NA
PB.5893.10	chr19	+	3445	4	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-1	any annotated donor/acceptor	FALSE	canonical	1	3209	junction_3	30929.159671740195	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	226	900	20.0	0	True	NA	NA
PB.3724.36	chr15	+	2638	7	full-splice_match	NIPA2	ENST00000398014.6	3130	7	35	457	0	211	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	476	1558	25.0	-13	True	NA	NA
PB.5893.16	chr19	+	5344	2	incomplete-splice_match	AC079466.1	ENST00000587961.1	4453	4	43	0	43	0	intron_retention	FALSE	canonical	1	77108	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	909	1424	20.0	0	True	NA	NA
PB.2023.1	chr11	+	3994	31	full-splice_match	PLCB3	ENST00000279230.10	4197	31	204	-1	152	1	multi-exon	FALSE	canonical	1	109565	junction_23	90174.12598858697	NA	0	NA	TRUE	NA	NA	NA	A	coding	1176	3531	98	3628	15.0	177	False	AATAAA	-15
PB.5893.14	chr19	+	3071	4	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-375	any annotated donor/acceptor	FALSE	canonical	1	3209	junction_3	30929.159671740195	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	226	900	70.0	0	True	NA	NA
PB.5893.15	chr19	+	2790	2	novel_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-375	no_combination_of_known_junctions	FALSE	canonical	1	10450	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1151	1537	70.0	0	True	NA	NA
PB.4114.1	chr15	-	2403	6	full-splice_match	SELENOS	ENST00000526049.5	1188	6	-44	-1171	10	-194	multi-exon	FALSE	canonical	1	621488	junction_4	227559.97151203902	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	74	637	30.0	-17	True	AATAAA	-31
PB.5893.18	chr19	+	3595	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	44	0	any annotated donor/acceptor	FALSE	canonical	1	9407	junction_3	25255.158428527033	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	225	692	20.0	1	True	NA	NA
PB.5893.19	chr19	+	3433	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	540	0	any annotated donor/acceptor	FALSE	canonical	1	1805	junction_1	20636.12823878307	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1419	1805	20.0	-93	False	NA	NA
PB.7175.7	chr20	+	2948	6	full-splice_match	BTBD3	ENST00000399006.6	4826	6	15	1863	4	1616	multi-exon	FALSE	canonical	1	17728	junction_1	148810.56535152334	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	483	1868	25.0	-1	True	AATATA	-19
PB.3102.1	chr13	+	2287	7	incomplete-splice_match	RFC3	ENST00000380071.7	2402	9	29	4765	9	-4765	3prime_fragment	FALSE	canonical	1	224763	junction_2	77545.7201885156	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	102	998	40.0	9	True	AATAAA	-31
PB.7175.5	chr20	+	4737	6	full-splice_match	BTBD3	ENST00000399006.6	4826	6	74	15	21	4	multi-exon	FALSE	canonical	1	17728	junction_1	148810.56535152334	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	424	1809	10.0	0	True	AATAAA	-13
PB.7175.4	chr20	+	4551	5	full-splice_match	BTBD3	ENST00000254977.7	4686	5	120	15	15	4	multi-exon	FALSE	canonical	1	99282	junction_1	103253.3914321946	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	238	1623	10.0	10	True	AATAAA	-13
PB.7175.3	chr20	+	5138	5	full-splice_match	BTBD3	ENST00000405977.5	5137	5	-16	15	-5	4	multi-exon	FALSE	canonical	1	17728	junction_1	138343.0928398668	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	642	2210	10.0	-21	True	AATAAA	-13
PB.4114.3	chr15	-	2958	4	novel_in_catalog	SELENOS	novel	1439	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	626559	junction_3	148197.78153160354	NA	2	NA	TRUE	NA	NA	NA	C	coding	106	321	2	322	25.0	0	True	ATTAAA	-21
PB.7175.1	chr20	+	2744	5	full-splice_match	BTBD3	ENST00000254977.7	4686	5	80	1862	-14	1617	multi-exon	FALSE	canonical	1	99282	junction_1	103253.3914321946	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	278	1663	25.0	-30	True	AATATA	-20
PB.9556.4	chr5	+	5610	2	incomplete-splice_match	SLC26A2	ENST00000286298.4	8080	3	27	4384	-21	-4384	intron_retention	FALSE	canonical	1	112449	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	2888	4402	80.0	2	True	NA	NA
PB.4114.2	chr15	-	1207	6	full-splice_match	SELENOS	ENST00000526049.5	1188	6	-28	9	-3	-1	multi-exon	FALSE	canonical	1	621488	junction_4	227559.97151203902	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	58	621	25.0	-1	True	ATTAAA	-21
PB.3102.3	chr13	+	1880	9	full-splice_match	RFC3	ENST00000380071.7	2402	9	59	463	39	-463	multi-exon	FALSE	canonical	1	224763	junction_2	76818.28728686614	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	72	1142	35.0	9	True	ATTAAA	-16
PB.7175.9	chr20	+	4808	3	incomplete-splice_match	BTBD3	ENST00000449299.5	849	4	27004	-3584	9	4	5prime_fragment	FALSE	canonical	1	24069	junction_1	164921.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	765	1880	10.0	-22	True	AATAAA	-13
PB.7175.8	chr20	+	4574	5	novel_not_in_catalog	BTBD3	novel	4686	5	NA	NA	10	4	any annotated donor/acceptor	FALSE	canonical	1	285	junction_1	143641.40025489693	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	531	1646	10.0	-11	True	AATAAA	-13
PB.8853.26	chr4	-	4071	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	31517	junction_14	355958.9782537308	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3624	36	3659	20.0	20	True	ATTAAA	-13
PB.8853.27	chr4	-	4078	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	83080	junction_14	357792.46959399956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3624	43	3666	20.0	16	True	ATTAAA	-13
PB.8853.24	chr4	-	4121	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	31517	junction_14	347005.02853443264	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	131	3709	20.0	9355	False	ATTAAA	-13
PB.2606.6	chr12	+	6451	16	full-splice_match	LARP4	ENST00000429001.7	4000	16	10	-2461	10	-18	multi-exon	FALSE	canonical	1	20741	junction_2	78205.52939973831	NA	5	NA	TRUE	NA	NA	NA	C	coding	730	2193	145	2337	75.0	-28	True	NA	NA
PB.7694.3	chr22	-	2425	1	incomplete-splice_match	LIF	ENST00000249075.3	3969	3	3973	7	3861	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	110	333	1453	1785	10.0	6344	False	AATAAA	-13
PB.7694.2	chr22	-	3881	3	full-splice_match	LIF	ENST00000249075.3	3969	3	44	44	44	-44	multi-exon	FALSE	canonical	1	192424	junction_2	31555.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	113	721	75.0	2415	False	AATGAA	-14
PB.7694.1	chr22	-	3874	3	novel_not_in_catalog	LIF	novel	3969	3	NA	NA	486	-6	any annotated donor/acceptor	FALSE	canonical	1	12643	junction_2	121446.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	158	477	200	676	10.0	2969	False	AATAAA	-14
PB.8853.21	chr4	-	4152	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	15006	junction_1	322288.16425889183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1196	3591	150	3740	20.0	9336	False	ATTAAA	-13
PB.2606.1	chr12	+	4350	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	41	2036	8	451	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	1	NA	TRUE	NA	NA	NA	C	coding	724	2175	72	2246	45.0	-230	False	AATAAA	-9
PB.10142.13	chr6	-	2450	21	full-splice_match	SEC63	ENST00000369002.8	6411	21	-11	3972	-11	-963	multi-exon	FALSE	canonical	1	53587	junction_1	210502.28907472716	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2259	192	2450	50.0	7	True	NA	NA
PB.8853.28	chr4	-	4008	25	full-splice_match	SEC31A	ENST00000505984.5	3596	25	-30	-382	0	0	multi-exon	FALSE	canonical	1	173262	junction_5	305932.70482001925	NA	0	NA	TRUE	NA	NA	NA	C	coding	1166	3501	96	3596	20.0	-37	True	ATTAAA	-13
PB.8853.29	chr4	-	4073	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1710	junction_24	347684.54305111925	NA	2	NA	TRUE	NA	NA	NA	C	coding	1166	3501	161	3661	20.0	9363	False	ATTAAA	-13
PB.6884.37	chr2	+	7086	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	15	13028	-9	1411	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	401	2782	35.0	27	True	NA	NA
PB.6884.36	chr2	+	3734	23	novel_not_in_catalog	DNAJC10	novel	5783	23	NA	NA	-11	-97	intron_retention	FALSE	canonical	1	31	junction_17	280767.57700861624	NA	11	NA	TRUE	NA	NA	NA	C	coding	272	819	403	1221	50.0	25	True	NA	NA
PB.6884.35	chr2	+	5130	23	full-splice_match	DNAJC10	ENST00000616986.4	5783	23	233	420	2	-420	multi-exon	FALSE	canonical	1	52732	junction_10	198452.65488736864	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	414	2657	20.0	14	True	NA	NA
PB.6884.34	chr2	+	4319	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	1	15809	1	810	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	415	2796	15.0	13	True	AATAGA	-18
PB.6884.33	chr2	+	2131	18	incomplete-splice_match	DNAJC10	ENST00000264065.11	20129	24	-2	38090	-2	15990	3prime_fragment	FALSE	canonical	1	343539	junction_11	164146.36055023965	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1713	418	2130	60.0	10	True	NA	NA
PB.6884.32	chr2	+	3411	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-2	16720	-2	-101	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	418	2799	30.0	10	True	AGTAAA	-19
PB.6884.31	chr2	+	3994	22	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-3	663	combination_of_known_junctions	FALSE	canonical	1	2065	junction_9	211055.06001165087	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	419	1246	45.0	9	True	ATTAAA	-18
PB.6884.30	chr2	+	4715	24	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-4	663	intron_retention	FALSE	canonical	1	17251	junction_2	238516.39800009853	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	279	1202	45.0	8	True	ATTAAA	-18
PB.8862.3	chr4	-	2515	7	novel_in_catalog	ABRAXAS1	novel	4291	9	NA	NA	6	0	intron_retention	FALSE	canonical	1	5535	junction_4	52300.42728766393	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	23	991	60.0	5	True	AATAAA	-17
PB.8862.2	chr4	-	2964	10	novel_in_catalog	ABRAXAS1	novel	4291	9	NA	NA	-4	0	intron_retention	FALSE	canonical	1	16503	junction_8	40290.884730855214	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	358	1440	60.0	-8	True	AATAAA	-17
PB.8862.1	chr4	-	2865	9	full-splice_match	ABRAXAS1	ENST00000321945.11	4291	9	15	1411	15	17	multi-exon	FALSE	canonical	1	19818	junction_3	41824.999847392406	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	95	1324	25.0	-9	False	AATAAA	-34
PB.8862.5	chr4	-	2668	9	full-splice_match	ABRAXAS1	ENST00000321945.11	4291	9	78	1545	0	-117	multi-exon	FALSE	canonical	1	19818	junction_3	41824.999847392406	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	32	1261	25.0	-4	True	ATTAAA	-41
PB.8862.4	chr4	-	2898	10	novel_in_catalog	ABRAXAS1	novel	4291	9	NA	NA	23	-117	combination_of_known_junctions	FALSE	canonical	1	16503	junction_8	40290.884730855214	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	409	1491	25.0	-1	True	ATTAAA	-41
PB.12365.3	chrX	+	1585	6	full-splice_match	VBP1	ENST00000286428.5	1686	6	95	6	95	1	multi-exon	FALSE	canonical	1	625491	junction_4	141164.10086619048	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	23	616	35.0	1	True	ATTAAA	-13
PB.12365.2	chrX	+	3989	5	incomplete-splice_match	VBP1	ENST00000286428.5	1686	6	94	7	94	0	intron_retention	FALSE	canonical	1	625491	junction_4	107440.03366616886	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	24	560	40.0	0	True	ATTAAA	-12
PB.12365.1	chrX	+	1293	6	full-splice_match	VBP1	ENST00000286428.5	1686	6	94	299	94	-292	multi-exon	FALSE	canonical	1	625491	junction_4	141164.10086619048	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	24	617	20.0	0	True	AATAAA	-20
PB.7773.3	chr22	-	3815	7	novel_in_catalog	CSNK1E	novel	2642	11	NA	NA	-29	0	intron_retention	FALSE	canonical	1	15349	junction_6	570146.3446768149	NA	1	NA	TRUE	NA	NA	NA	B	coding	453	1362	351	1712	0.0	7	True	AATAAA	-15
PB.7773.2	chr22	-	1661	11	novel_in_catalog	CSNK1E	novel	2642	11	NA	NA	-36	12	combination_of_known_junctions	FALSE	canonical	1	15349	junction_10	516676.8444749581	NA	0	NA	TRUE	NA	NA	NA	B	coding	416	1251	358	1608	100.0	0	True	NA	NA
PB.7773.1	chr22	-	1723	12	novel_in_catalog	CSNK1E	novel	2642	11	NA	NA	-37	12	combination_of_known_junctions	FALSE	canonical	1	15349	junction_11	603743.8553161569	NA	0	NA	TRUE	NA	NA	NA	B	coding	431	1296	359	1654	100.0	-1	True	NA	NA
PB.7773.5	chr22	-	2420	7	novel_not_in_catalog	CSNK1E	novel	2642	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	16102	junction_6	569890.4575017758	NA	1	1	TRUE	NA	NA	NA	B	coding	453	1362	353	1714	10.0	13	True	ATTAAA	-17
PB.7773.4	chr22	-	3615	7	incomplete-splice_match	CSNK1E	ENST00000403904.5	1580	10	142	2956	111	0	3prime_fragment	FALSE	canonical	1	287898	junction_6	479339.997789814	NA	0	NA	TRUE	NA	NA	NA	B	coding	453	1362	151	1512	0.0	-1	True	AATAAA	-15
PB.11549.4	chr9	+	2117	7	full-splice_match	DCAF10	ENST00000377724.7	3862	7	422	1323	370	561	multi-exon	FALSE	canonical	1	129259	junction_1	29655.222495371705	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	385	1623	20.0	127	False	AATAAA	-15
PB.1226.20	chr1	-	3659	25	incomplete-splice_match	HEATR1	ENST00000366582.7	8447	45	-9	23748	-9	1243	3prime_fragment	FALSE	canonical	1	193779	junction_16	49745.57651773268	NA	0	NA	TRUE	NA	NA	NA	C	coding	1178	3534	125	3658	70.0	-26	True	GATAAA	-26
PB.785.2	chr1	-	3134	10	novel_in_catalog	PBXIP1	novel	3144	10	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	23552	junction_9	262669.4454662657	NA	4	NA	TRUE	NA	NA	NA	C	coding	702	2109	90	2198	35.0	-23	True	NA	NA
PB.4405.14	chr16	-	2619	17	full-splice_match	VPS35	ENST00000299138.11	6790	17	20	4151	8	-606	multi-exon	FALSE	canonical	1	394719	junction_16	240672.5968109672	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	40	2430	25.0	-4	True	AATAAA	-15
PB.4405.15	chr16	-	3336	1	novel_in_catalog	VPS35	novel	5054	18	NA	NA	0	-2977	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-26	True	ATTAAA	-19
PB.8668.5	chr4	+	2279	15	novel_in_catalog	ADD1	novel	3059	7	NA	NA	-8	26	intron_retention	FALSE	canonical	1	768193	junction_1	256734.49486517892	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2148	132	2279	55.0	13	True	NA	NA
PB.8668.4	chr4	+	2374	15	full-splice_match	ADD1	ENST00000264758.11	4045	15	55	1616	-10	26	multi-exon	FALSE	canonical	1	161902	junction_10	368129.7833788391	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2241	134	2374	55.0	11	True	NA	NA
PB.4405.10	chr16	-	2573	17	novel_not_in_catalog	VPS35	novel	6790	17	NA	NA	0	-536	any annotated donor/acceptor	FALSE	canonical	1	4508	junction_11	320530.703226982	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	62	2314	100.0	-26	True	TTTAAA	-16
PB.4405.11	chr16	-	3472	17	full-splice_match	VPS35	ENST00000568784.6	4017	17	8	537	8	-537	multi-exon	FALSE	canonical	1	4811	junction_16	305127.8686345847	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	911	3214	95.0	29	False	TTTAAA	-15
PB.4405.12	chr16	-	2565	16	novel_in_catalog	VPS35	novel	6790	17	NA	NA	12	-579	combination_of_known_junctions	FALSE	canonical	1	25491	junction_14	331070.6843820113	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	160	2349	30.0	0	True	AATAAA	-42
PB.6653.3	chr2	+	1729	9	incomplete-splice_match	EIF5B	ENST00000289371.10	5777	24	17	29604	-1	-18968	3prime_fragment	FALSE	canonical	1	733278	junction_5	141805.42295910046	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	186	1727	50.0	-19	True	NA	NA
PB.6653.2	chr2	+	1668	10	incomplete-splice_match	EIF5B	ENST00000289371.10	5777	24	172	24894	154	-14258	3prime_fragment	FALSE	canonical	1	611295	junction_9	165855.3091610684	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1638	31	1668	50.0	-1	True	NA	NA
PB.7169.2	chr20	-	5952	8	full-splice_match	TMX4	ENST00000246024.6	6169	8	132	85	-51	-85	multi-exon	FALSE	canonical	1	235901	junction_7	101748.35907557147	NA	5	NA	TRUE	NA	NA	NA	C	coding	349	1050	85	1134	45.0	9	True	AGTAAA	-23
PB.7169.4	chr20	-	5760	8	full-splice_match	TMX4	ENST00000246024.6	6169	8	45	364	21	-364	multi-exon	FALSE	canonical	1	235901	junction_7	101748.35907557147	NA	6	NA	TRUE	NA	NA	NA	C	coding	349	1050	172	1221	30.0	28	True	ACTAAA	-31
PB.7169.5	chr20	-	5071	8	full-splice_match	TMX4	ENST00000246024.6	6169	8	25	1073	1	-1073	multi-exon	FALSE	canonical	1	235901	junction_7	101748.35907557147	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	192	1241	35.0	8	True	GATAAA	-16
PB.7169.6	chr20	-	2319	8	full-splice_match	TMX4	ENST00000246024.6	6169	8	132	3718	-51	2728	multi-exon	FALSE	canonical	1	235901	junction_7	101748.35907557147	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	85	1134	70.0	9	True	NA	NA
PB.7169.7	chr20	-	2316	8	full-splice_match	TMX4	ENST00000246024.6	6169	8	28	3825	4	2621	multi-exon	FALSE	canonical	1	235901	junction_7	101748.35907557147	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	189	1238	25.0	11	True	AATGAA	-19
PB.7169.8	chr20	-	1992	8	full-splice_match	TMX4	ENST00000246024.6	6169	8	109	4068	-74	2378	multi-exon	FALSE	canonical	1	235901	junction_7	101748.35907557147	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	108	1157	35.0	-1	True	ATTAAA	-18
PB.6653.9	chr2	+	1102	5	incomplete-splice_match	EIF5B	ENST00000617677.1	4698	25	18	36604	18	-27029	3prime_fragment	FALSE	canonical	1	806039	junction_4	122704.72957138816	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	936	167	1102	75.0	0	True	AATGAA	-7
PB.6653.8	chr2	+	1304	5	incomplete-splice_match	EIF5B	ENST00000617677.1	4698	25	18	36402	18	-26827	3prime_fragment	FALSE	canonical	1	806039	junction_4	122704.72957138816	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1137	167	1303	20.0	0	True	TATAAA	-39
PB.9215.9	chr5	+	2429	14	incomplete-splice_match	NNT	ENST00000344920.8	4310	22	50	51820	-22	-168	3prime_fragment	FALSE	canonical	1	242335	junction_1	93632.72969060343	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	172	2262	45.0	-9	True	AATAAA	-16
PB.6172.3	chr19	+	4579	6	novel_not_in_catalog	ZNF613	novel	585	3	NA	NA	3	-713	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	28897.61464204269	NA	3	1	TRUE	NA	NA	NA	C	coding	617	1854	417	2270	10.0	11	True	AATAAA	-16
PB.6172.2	chr19	+	2410	7	novel_in_catalog	ZNF613	novel	585	3	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	1096	junction_2	30400.660310811232	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	542	2395	20.0	-18	True	AATAAA	-15
PB.6172.1	chr19	+	2324	6	full-splice_match	ZNF613	ENST00000293471.10	3419	6	227	868	-1	3	multi-exon	FALSE	canonical	1	15169	junction_1	24157.899133823703	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	453	2306	20.0	-29	True	AATAAA	-18
PB.2258.1	chr11	-	4327	18	full-splice_match	CWF19L2	ENST00000282251.9	3278	18	25	-1074	25	1074	multi-exon	FALSE	canonical	1	96084	junction_3	57443.515094105984	NA	2	NA	TRUE	NA	NA	NA	C	coding	890	2673	16	2688	25.0	5	True	CATAAA	-14
PB.2258.2	chr11	-	3234	18	novel_not_in_catalog	CWF19L2	novel	3278	18	NA	NA	25	-7	any annotated donor/acceptor	FALSE	canonical	1	583	junction_17	63002.83345163339	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	16	2676	25.0	5	True	ATTAAA	-29
PB.2258.3	chr11	-	3243	18	full-splice_match	CWF19L2	ENST00000282251.9	3278	18	19	16	19	-1	multi-exon	FALSE	canonical	1	96084	junction_3	57443.515094105984	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	22	2694	30.0	-1	True	ATTAAA	-20
PB.11398.6	chr8	+	2026	13	full-splice_match	HSF1	ENST00000528838.5	2142	13	114	2	107	0	multi-exon	FALSE	canonical	1	392078	junction_9	303895.92874105583	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	47	1636	10.0	107	False	TATAAA	-17
PB.11551.4	chr9	+	2626	2	full-splice_match	ALDH1B1	ENST00000377698.3	3066	2	57	383	9	-383	multi-exon	FALSE	canonical	1	350081	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	97	1650	45.0	-44	True	NA	NA
PB.9060.5	chr4	+	3095	11	novel_in_catalog	PALLD	novel	5809	21	NA	NA	8	-612	combination_of_known_junctions	FALSE	canonical	1	41323	junction_1	317226.60666507785	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	317	1675	70.0	-6682	False	GATAAA	-5
PB.11572.1	chr9	+	2223	2	full-splice_match	BX005266.2	ENST00000446626.2	2245	2	28	-6	28	4	multi-exon	FALSE	canonical	1	91	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	NA	False	NA	NA
PB.9667.43	chr5	+	2577	9	incomplete-splice_match	CANX	ENST00000247461.8	4260	15	10966	956	178	320	5prime_fragment	FALSE	canonical	1	3488323	junction_1	873974.9787798561	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	35	1252	25.0	-62	True	AATAAA	-13
PB.11549.2	chr9	+	4975	6	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	214	567	intron_retention	FALSE	canonical	1	129259	junction_1	32311.747770741218	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	100	1329	25.0	-29	True	AATAAA	-21
PB.11966.6	chrX	+	3814	11	full-splice_match	MSL3	ENST00000649684.1	3665	11	5	-154	-2	0	multi-exon	FALSE	canonical	1	134288	junction_6	96557.52750438466	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	2721	3146	50.0	-8746	False	AATAAA	-15
PB.7426.2	chr20	+	4598	6	full-splice_match	DNAJC5	ENST00000470551.1	5287	6	-56	745	-56	-745	multi-exon	FALSE	canonical	1	24191	junction_1	146064.0348011789	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	210	713	15.0	-22	True	NA	NA
PB.7426.3	chr20	+	3283	5	full-splice_match	DNAJC5	ENST00000360864.8	5213	5	-56	1986	-56	-1986	multi-exon	FALSE	canonical	1	24191	junction_1	196966.97171162986	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	210	806	15.0	-22	True	AATAAA	-19
PB.9912.2	chr6	-	3472	5	full-splice_match	HLA-DOA	ENST00000229829.6	3489	5	10	7	10	-7	multi-exon	FALSE	canonical	1	88034	junction_4	26600.060253691157	NA	2	NA	TRUE	NA	NA	NA	C	coding	250	753	67	819	35.0	-27	True	ATTAAA	-18
PB.2410.1	chr12	-	1356	4	novel_in_catalog	CD27-AS1	novel	2364	6	NA	NA	6	-30	intron_retention	FALSE	canonical	1	42266	junction_2	66574.11237110113	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-60	True	NA	NA
PB.12032.8	chrX	+	5020	26	incomplete-splice_match	USP9X	ENST00000378308.6	8371	45	84834	-158	3324	158	5prime_fragment	FALSE	canonical	1	350726	junction_5	229823.06500505994	NA	1	NA	TRUE	NA	NA	NA	C	coding	1583	4752	38	4789	40.0	-7647	False	AATAAA	-26
PB.7426.7	chr20	+	3332	6	full-splice_match	DNAJC5	ENST00000470551.1	5287	6	-35	1990	-35	-1990	multi-exon	FALSE	canonical	1	24191	junction_1	146064.0348011789	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	189	692	15.0	-1	True	AATAAA	-15
PB.7426.4	chr20	+	4529	5	full-splice_match	DNAJC5	ENST00000360864.8	5213	5	-55	739	-55	-739	multi-exon	FALSE	canonical	1	24191	junction_1	196966.97171162986	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	209	805	5.0	-21	True	NA	NA
PB.7426.5	chr20	+	5251	5	full-splice_match	DNAJC5	ENST00000360864.8	5213	5	-44	6	-44	-6	multi-exon	FALSE	canonical	1	24191	junction_1	196966.97171162986	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	198	794	20.0	-10	True	AATAAA	-35
PB.9912.8	chr6	-	3153	6	novel_not_in_catalog	HLA-DOA	novel	3489	5	NA	NA	10	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58305.089523985815	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	67	819	35.0	-27	True	ATTAAA	-17
PB.7426.8	chr20	+	4374	6	full-splice_match	DNAJC5	ENST00000470551.1	5287	6	-9	922	-9	-922	multi-exon	FALSE	canonical	1	24191	junction_1	146064.0348011789	NA	28	NA	TRUE	NA	NA	NA	C	coding	167	504	163	666	35.0	25	True	NA	NA
PB.10970.8	chr8	+	5076	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	442	-1833	-61	1833	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	5	NA	TRUE	NA	NA	NA	C	coding	304	915	51	965	50.0	-9726	False	AATAAA	-18
PB.12032.1	chrX	+	8356	45	full-splice_match	USP9X	ENST00000378308.6	8371	45	174	-159	174	159	multi-exon	FALSE	canonical	1	254473	junction_5	233691.2750185928	NA	0	NA	TRUE	NA	NA	NA	C	coding	2554	7665	460	8124	40.0	0	True	AATAAA	-27
PB.12032.2	chrX	+	8371	45	novel_not_in_catalog	USP9X	novel	8371	45	NA	NA	174	159	any annotated donor/acceptor	FALSE	canonical	1	133147	junction_13	238524.13483607813	NA	1	NA	TRUE	NA	NA	NA	C	coding	2559	7680	460	8139	40.0	0	True	AATAAA	-27
PB.12032.3	chrX	+	8525	45	full-splice_match	USP9X	ENST00000378308.6	8371	45	175	-329	175	329	multi-exon	FALSE	canonical	1	254473	junction_5	233691.2750185928	NA	0	NA	TRUE	NA	NA	NA	C	coding	2554	7665	459	8123	90.0	1	True	NA	NA
PB.7567.2	chr21	+	3080	1	incomplete-splice_match	LINC00205	ENST00000400362.3	7540	3	6223	454	-505	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	6191	False	NA	NA
PB.9055.10	chr4	+	2017	6	full-splice_match	MSMO1	ENST00000261507.10	2269	6	95	157	-3	-26	multi-exon	FALSE	canonical	1	591155	junction_1	251512.37333427553	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	79	960	30.0	-2	True	ATTAAA	-13
PB.7567.1	chr21	+	3920	4	full-splice_match	LINC00205	ENST00000647108.1	4397	4	-1	478	-1	-475	multi-exon	FALSE	canonical	1	1638	junction_3	28798.70072686536	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	2918	3412	30.0	-21	True	NA	NA
PB.8575.4	chr3	-	2388	9	novel_in_catalog	LIPH	novel	4026	10	NA	NA	-25	286	no_combination_of_known_junctions	FALSE	canonical	1	4236	junction_5	19154.044551673676	NA	4	1	TRUE	NA	NA	NA	C	coding	293	882	497	1378	40.0	1	True	ATTAAA	-18
PB.9055.11	chr4	+	2048	5	novel_in_catalog	MSMO1	novel	2269	6	NA	NA	16	-3	no_combination_of_known_junctions	FALSE	canonical	1	2699	junction_1	463440.7054880376	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	349	837	35.0	17	True	ATTAAA	-15
PB.11549.3	chr9	+	3478	6	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	221	0	combination_of_known_junctions	FALSE	canonical	1	50164	junction_4	54037.224782921636	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	93	1661	100.0	-22	True	NA	NA
PB.11966.9	chrX	+	2000	11	full-splice_match	MSL3	ENST00000482871.6	2339	11	-92	431	-92	15	multi-exon	FALSE	canonical	1	134288	junction_5	96122.66252393345	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	766	1833	20.0	-8434	False	NA	NA
PB.8440.8	chr3	-	1368	11	novel_in_catalog	TFDP2	novel	9857	13	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	175999	junction_10	106594.76231297672	NA	4	NA	TRUE	NA	NA	NA	C	coding	385	1158	188	1345	25.0	515	False	AATAAA	-23
PB.11794.2	chr9	+	4740	2	full-splice_match	ZBTB43	ENST00000449886.5	5851	2	4	1107	4	0	multi-exon	FALSE	canonical	1	28388	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	147	1550	85.0	-30	True	NA	NA
PB.11966.8	chrX	+	2198	13	full-splice_match	MSL3	ENST00000649602.1	2230	13	43	-11	-1	0	multi-exon	FALSE	canonical	1	24002	junction_1	107790.25398687748	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	463	1530	50.0	0	True	AATAAA	-15
PB.4065.1	chr15	-	2372	8	novel_in_catalog	RLBP1	novel	1810	9	NA	NA	-61	-23	intron_retention	FALSE	canonical	1	4512	junction_5	3276.5117090576427	NA	0	NA	TRUE	NA	NA	NA	B	coding	317	954	1026	1979	70.0	54	False	NA	NA
PB.4065.3	chr15	-	1723	9	novel_not_in_catalog	RLBP1	novel	1810	9	NA	NA	62	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	4430.8018955376465	NA	0	NA	TRUE	NA	NA	NA	B	coding	317	954	380	1333	70.0	1	True	NA	NA
PB.10299.2	chr6	-	1720	4	full-splice_match	TMEM242	ENST00000400788.8	4043	4	68	2255	68	-2255	multi-exon	FALSE	canonical	1	95476	junction_2	110079.04133646676	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	35	460	35.0	-20	True	AATGAA	-16
PB.7699.1	chr22	-	5064	16	full-splice_match	SF3A1	ENST00000215793.12	5143	16	50	29	-3	-29	multi-exon	FALSE	canonical	1	381723	junction_4	321483.83559602016	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	106	2487	70.0	-7	True	NA	NA
PB.10247.3	chr6	+	3176	7	full-splice_match	VTA1	ENST00000620996.4	3272	7	97	-1	2	1	multi-exon	FALSE	canonical	1	27449	junction_6	323457.8050933468	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	30	872	15.0	-4	True	NA	NA
PB.5016.1	chr17	-	3017	2	novel_not_in_catalog	CCDC200	novel	649	4	NA	NA	-15602	-12728	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	17	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.10247.4	chr6	+	1385	8	full-splice_match	VTA1	ENST00000367630.8	7028	8	30	5613	3	9	multi-exon	FALSE	canonical	1	451778	junction_2	195021.9438935014	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	29	952	25.0	-3	True	AATAAA	-23
PB.10247.5	chr6	+	3255	8	full-splice_match	VTA1	ENST00000367630.8	7028	8	31	3742	4	1	multi-exon	FALSE	canonical	1	451778	junction_2	195021.9438935014	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	28	951	15.0	-2	True	NA	NA
PB.11108.3	chr8	+	3518	9	full-splice_match	AP3M2	ENST00000396926.7	3545	9	28	-1	10	0	multi-exon	FALSE	canonical	1	77525	junction_1	40858.02977001583	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	140	1396	15.0	-24	True	AATAAA	-18
PB.11108.2	chr8	+	2896	10	novel_not_in_catalog	AP3M2	novel	3669	10	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	4444	junction_9	64457.451951071496	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	144	1400	15.0	-28	True	AATAAA	-17
PB.11108.1	chr8	+	2753	10	full-splice_match	AP3M2	ENST00000518421.5	3669	10	81	835	-2	-835	multi-exon	FALSE	canonical	1	6922	junction_1	73035.48442966983	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	211	1467	30.0	-36	True	AAAACA	-38
PB.11108.7	chr8	+	2668	9	full-splice_match	AP3M2	ENST00000396926.7	3545	9	43	834	-20	-834	multi-exon	FALSE	canonical	1	77525	junction_1	40858.02977001583	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	125	1381	25.0	-9	True	AAAACA	-39
PB.10247.6	chr6	+	1914	8	full-splice_match	VTA1	ENST00000367630.8	7028	8	32	5082	5	540	multi-exon	FALSE	canonical	1	451778	junction_2	195021.9438935014	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	27	950	35.0	-1	True	AATAAA	-35
PB.11108.5	chr8	+	3569	10	full-splice_match	AP3M2	ENST00000518421.5	3669	10	101	-1	18	0	multi-exon	FALSE	canonical	1	6922	junction_1	73035.48442966983	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	191	1447	15.0	-16	True	AATAAA	-18
PB.11108.4	chr8	+	3740	10	novel_not_in_catalog	AP3M2	novel	3669	10	NA	NA	12	0	intron_retention	FALSE	canonical	1	43	junction_2	79685.49502889469	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	708	1619	15.0	-22	True	AATAAA	-17
PB.11108.9	chr8	+	3696	10	novel_not_in_catalog	AP3M2	novel	3669	10	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	1009	junction_2	79504.85394406223	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	665	1576	15.0	1	True	AATAAA	-16
PB.10247.7	chr6	+	3005	7	full-splice_match	VTA1	ENST00000620996.4	3272	7	101	166	6	-166	multi-exon	FALSE	canonical	1	27449	junction_6	323457.8050933468	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	26	868	30.0	0	True	AATAAA	-28
PB.11771.11	chr9	-	2258	4	full-splice_match	PDCL	ENST00000259467.8	2813	4	43	512	43	-512	multi-exon	FALSE	canonical	1	230087	junction_3	58248.26971392941	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	124	1029	45.0	-1	True	NA	NA
PB.11256.15	chr8	+	1574	8	novel_not_in_catalog	MTDH	novel	6177	12	NA	NA	13	-5372	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	429379.63584417163	NA	10	1	TRUE	NA	NA	NA	C	coding	252	759	316	1074	90.0	8	True	GATAAA	-37
PB.8183.12	chr3	+	2708	10	full-splice_match	IL17RB	ENST00000475124.1	2822	10	-16	130	-12	-130	multi-exon	FALSE	canonical	1	66893	junction_5	29864.55897696949	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	22	888	45.0	0	True	AATAAA	-17
PB.11549.1	chr9	+	2603	1	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	213	-57072	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	180	543	101	643	35.0	-30	True	AATAAA	-18
PB.1136.2	chr1	+	3770	1	intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	4	True	ATTAAA	-17
PB.1136.1	chr1	+	4268	1	intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-2	True	NA	NA
PB.3998.1	chr15	-	3808	1	novel_in_catalog	DNM1P35	novel	3188	3	NA	NA	29	-7117	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	159	480	267	746	35.0	22	True	NA	NA
PB.4146.1	chr16	+	1401	8	full-splice_match	UBE2I	ENST00000403747.6	1217	8	-51	-133	-8	-3	multi-exon	FALSE	canonical	1	14636	junction_2	1118614.119671137	NA	3	NA	TRUE	NA	NA	NA	C	coding	158	477	371	847	25.0	-9	True	AATAAA	-11
PB.4146.2	chr16	+	1092	7	full-splice_match	UBE2I	ENST00000397514.7	2976	7	214	1670	25	-3	multi-exon	FALSE	canonical	1	1172356	junction_1	531576.1297239872	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	62	538	25.0	-4315	False	AATAAA	-11
PB.4146.3	chr16	+	3016	8	novel_not_in_catalog	UBE2I	novel	3253	7	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	5037	junction_1	1125482.439545362	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	317	793	5.0	-5	True	ATTAAA	-13
PB.4146.4	chr16	+	1637	7	novel_in_catalog	UBE2I	novel	3253	7	NA	NA	3	-3	intron_retention	FALSE	canonical	1	8854	junction_4	983864.2772360536	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	15	True	AATAAA	-11
PB.4146.5	chr16	+	2827	7	full-splice_match	UBE2I	ENST00000397514.7	2976	7	148	1	2	-1	multi-exon	FALSE	canonical	1	1172356	junction_1	531576.1297239872	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	128	604	5.0	22	True	ATTAAA	-13
PB.4146.6	chr16	+	3022	8	full-splice_match	UBE2I	ENST00000403747.6	1217	8	-3	-1802	-3	-1	multi-exon	FALSE	canonical	1	14636	junction_2	1118614.119671137	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	323	799	5.0	39	True	ATTAAA	-13
PB.6245.1	chr19	+	2314	4	full-splice_match	ZNF419	ENST00000442920.6	1857	4	0	-457	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	8256.916185167978	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	234	1727	30.0	0	True	NA	NA
PB.11136.4	chr8	-	2559	8	full-splice_match	TMEM68	ENST00000434581.6	2549	8	-18	8	-5	0	multi-exon	FALSE	canonical	1	118103	junction_7	25934.66997779503	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	219	1193	45.0	5	True	ATTAAA	-8
PB.10632.1	chr7	-	3290	31	novel_in_catalog	GSAP	novel	2618	9	NA	NA	7	-7	combination_of_known_junctions	FALSE	canonical	1	3766	junction_15	27597.441589071663	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	73	2691	35.0	-45	True	ATTAAA	-8
PB.10632.2	chr7	-	3256	31	full-splice_match	GSAP	ENST00000257626.11	3251	31	-13	8	-13	-7	multi-exon	FALSE	canonical	1	44084	junction_30	22021.655878021524	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	93	2657	35.0	-65	True	ATTAAA	-8
PB.10632.3	chr7	-	3171	30	novel_in_catalog	GSAP	novel	2618	9	NA	NA	-24	-7	combination_of_known_junctions	FALSE	canonical	1	3164	junction_7	28037.518096272554	NA	6	1	TRUE	NA	NA	NA	C	coding	822	2469	104	2572	35.0	-76	False	ATTAAA	-8
PB.7256.19	chr20	-	2788	10	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-30086	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	281813.6913079584	NA	3	1	TRUE	NA	NA	NA	C	coding	357	1074	27	1100	100.0	-1	True	NA	NA
PB.11136.1	chr8	-	2664	9	novel_not_in_catalog	TMEM68	novel	726	3	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	376	junction_2	70511.08424112748	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	226	1236	45.0	-2	True	ATTAAA	-8
PB.11136.2	chr8	-	2590	8	novel_in_catalog	TMEM68	novel	726	3	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	19978	junction_7	55992.32171959849	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	250	1224	45.0	16	True	ATTAAA	-8
PB.11136.3	chr8	-	2647	9	novel_in_catalog	TMEM68	novel	726	3	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1104	junction_6	71393.80306080055	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	307	1281	45.0	-1	True	ATTAAA	-8
PB.7256.15	chr20	-	3969	18	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	1	-9	intron_retention	FALSE	canonical	1	190024	junction_10	211107.4633033299	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	26	2368	35.0	0	True	AATAAA	-35
PB.7757.4	chr22	+	2529	17	novel_in_catalog	SH3BP1	novel	2858	20	NA	NA	-5	10	intron_retention	FALSE	canonical	1	14315	junction_1	151773.09783006206	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	248	2161	30.0	0	True	AATAAA	-30
PB.7256.17	chr20	-	3571	18	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	21316	junction_10	287310.88077732973	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	1423	2226	35.0	-1	True	AATAAA	-35
PB.7256.16	chr20	-	3714	19	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	54492	junction_2	258551.5213322525	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	27	2369	35.0	-1	True	AATAAA	-35
PB.7757.1	chr22	+	2446	18	novel_not_in_catalog	SH3BP1	novel	2858	20	NA	NA	-60	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	156696.72323017052	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	180	1958	35.0	-81	False	AATAAA	-20
PB.7256.10	chr20	-	3001	18	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	no_combination_of_known_junctions	FALSE	canonical	1	4188	junction_13	284469.1282827933	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	27	2267	35.0	-1	True	AATAAA	-36
PB.7757.3	chr22	+	2646	18	full-splice_match	SH3BP1	ENST00000649765.1	2660	18	3	11	3	-11	multi-exon	FALSE	canonical	1	106947	junction_1	142264.42695060765	NA	1	NA	TRUE	NA	NA	NA	C	coding	701	2106	117	2222	45.0	-18	True	AATAAA	-22
PB.7757.2	chr22	+	1969	18	novel_in_catalog	SH3BP1	novel	2858	20	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	10107	junction_17	155548.62084437854	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1809	160	1968	35.0	-61	True	AATAAA	-20
PB.11985.2	chrX	-	3933	19	full-splice_match	CTPS2	ENST00000380241.7	3526	19	-102	-305	-102	2	multi-exon	FALSE	canonical	1	20065	junction_18	51198.90578571305	NA	3	NA	TRUE	NA	NA	NA	C	coding	586	1761	357	2117	15.0	6439	False	NA	NA
PB.11985.3	chrX	-	3873	19	novel_not_in_catalog	CTPS2	novel	4319	19	NA	NA	-17	2	any annotated donor/acceptor	FALSE	canonical	1	6904	junction_18	53549.207839842886	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	297	2057	15.0	-1	True	NA	NA
PB.8640.3	chr3	+	2235	1	novel_in_catalog	LMLN	novel	2010	17	NA	NA	0	-17995	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-16	True	NA	NA
PB.11985.1	chrX	-	3730	19	full-splice_match	CTPS2	ENST00000359276.8	3629	19	204	-305	204	2	multi-exon	FALSE	canonical	1	40853	junction_18	47639.23487817345	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	154	1914	15.0	7029	False	NA	NA
PB.11985.6	chrX	-	2313	19	full-splice_match	CTPS2	ENST00000359276.8	3629	19	-16	1332	-16	-89	multi-exon	FALSE	canonical	1	40853	junction_18	47639.23487817345	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	374	2134	25.0	0	True	AATACA	-17
PB.1888.1	chr11	-	4755	16	novel_in_catalog	ABTB2	novel	4902	17	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	2342	junction_15	31346.59095950024	NA	2	NA	TRUE	NA	NA	NA	C	coding	976	2931	426	3356	10.0	-1	True	AATAAA	-16
PB.1888.2	chr11	-	4506	17	full-splice_match	ABTB2	ENST00000435224.2	4902	17	389	7	389	-7	multi-exon	FALSE	canonical	1	57021	junction_15	22746.72607177514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3078	37	3114	30.0	1524	False	AATAAA	-9
PB.11985.5	chrX	-	3740	19	novel_not_in_catalog	CTPS2	novel	4319	19	NA	NA	-30	1	any annotated donor/acceptor	FALSE	canonical	1	13476	junction_18	52367.06734036428	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	165	1925	15.0	-14	True	NA	NA
PB.5199.1	chr17	+	2467	9	novel_in_catalog	BPTF	novel	7573	22	NA	NA	3	-48	intron_retention	FALSE	canonical	1	71544	junction_4	125239.43759998036	NA	1	NA	TRUE	NA	NA	NA	B	coding	787	2361	107	2467	80.0	337	False	NA	NA
PB.11985.9	chrX	-	2243	19	novel_not_in_catalog	CTPS2	novel	4319	19	NA	NA	64	-1	any annotated donor/acceptor	FALSE	canonical	1	6904	junction_18	53549.207839842886	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	216	1976	25.0	80	True	ATTAAA	-18
PB.11136.7	chr8	-	1928	8	full-splice_match	TMEM68	ENST00000434581.6	2549	8	-24	645	0	298	multi-exon	FALSE	canonical	1	118103	junction_7	25934.66997779503	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	225	1199	25.0	-1	True	AATAAA	-30
PB.8774.11	chr4	-	3030	7	novel_not_in_catalog	SGCB	novel	4431	6	NA	NA	-48	-1326	any annotated donor/acceptor	FALSE	canonical	1	1852	junction_6	216855.35913189285	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	446	1105	25.0	-23	True	ATTAAA	-14
PB.8774.10	chr4	-	2926	6	full-splice_match	SGCB	ENST00000381431.9	4431	6	183	1322	-54	-1322	multi-exon	FALSE	canonical	1	215336	junction_5	102160.11330847279	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	41	997	25.0	-29	True	ATTAAA	-18
PB.8774.13	chr4	-	2004	6	full-splice_match	SGCB	ENST00000381431.9	4431	6	195	2232	-42	-2232	multi-exon	FALSE	canonical	1	215336	junction_5	102160.11330847279	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	29	985	65.0	-17	True	AAAACA	-19
PB.8774.12	chr4	-	2686	5	novel_in_catalog	SGCB	novel	4431	6	NA	NA	-29	-1327	no_combination_of_known_junctions	FALSE	canonical	1	23943	junction_4	184115.75651390487	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	16	762	20.0	-4	True	ATTAAA	-13
PB.8280.2	chr3	+	3455	16	full-splice_match	ALCAM	ENST00000306107.9	4701	16	468	778	34	208	multi-exon	FALSE	canonical	1	442440	junction_1	97004.90393835196	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	33	1784	65.0	-1933	False	ATTAAA	-45
PB.232.2	chr1	+	5877	20	novel_in_catalog	EPB41	novel	5968	21	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	9616	junction_15	249242.47874165696	NA	5	NA	TRUE	NA	NA	NA	C	coding	639	1920	750	2669	75.0	-24	True	NA	NA
PB.232.1	chr1	+	5846	19	novel_in_catalog	EPB41	novel	5968	21	NA	NA	-25	-6	combination_of_known_junctions	FALSE	canonical	1	224002	junction_1	207797.23752768178	NA	3	NA	TRUE	NA	NA	NA	C	coding	622	1869	763	2631	55.0	-106	False	AATAAA	-2
PB.7381.8	chr20	+	2744	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-16	854	intron_retention	FALSE	non_canonical	0	0	junction_1	271044.10133084416	NA	2	1	TRUE	NA	NA	NA	C	coding	272	819	877	1695	15.0	-46	True	AGTAAA	-15
PB.7381.9	chr20	+	2489	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-13	1231	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	271044.10133084416	NA	5	NA	TRUE	NA	NA	NA	C	coding	272	819	245	1063	35.0	-43	True	ATTAAA	-27
PB.10149.19	chr6	-	2210	6	full-splice_match	CD164	ENST00000504373.2	2992	6	15	767	15	-2	multi-exon	FALSE	canonical	1	6819	junction_5	950090.5393623073	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	173	640	20.0	1194	False	ATTAAA	-14
PB.10149.18	chr6	-	2250	6	full-splice_match	CD164	ENST00000310786.9	3365	6	347	768	-8	-3	multi-exon	FALSE	canonical	1	1733127	junction_4	302048.6974468852	NA	3	NA	TRUE	NA	NA	NA	C	coding	197	594	88	681	20.0	1	True	ATTAAA	-13
PB.11771.12	chr9	-	1932	4	full-splice_match	PDCL	ENST00000259467.8	2813	4	-1	882	-1	-882	multi-exon	FALSE	canonical	1	230087	junction_3	58248.26971392941	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	168	1073	75.0	-45	False	NA	NA
PB.7381.1	chr20	+	3368	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-38	-861	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	271044.10133084416	NA	4	1	TRUE	NA	NA	NA	C	coding	272	819	202	1020	90.0	-8772	False	NA	NA
PB.7381.2	chr20	+	3371	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-18	-861	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	271044.10133084416	NA	4	1	TRUE	NA	NA	NA	C	coding	272	819	205	1023	90.0	-48	True	NA	NA
PB.7381.3	chr20	+	7463	1	genic	STX16-NPEPL1_STX16	novel	NA	NA	NA	NA	-18	-10721	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	132	399	3	401	50.0	-48	True	NA	NA
PB.7381.4	chr20	+	4202	9	novel_in_catalog	STX16	novel	4318	9	NA	NA	-16	-861	intron_retention	FALSE	canonical	1	1044	junction_1	301381.0088927096	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	1036	1854	90.0	-46	True	NA	NA
PB.7381.5	chr20	+	3496	7	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	16	-861	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	308797.7011965115	NA	3	1	TRUE	NA	NA	NA	C	coding	139	420	729	1148	90.0	-9120	False	NA	NA
PB.7381.6	chr20	+	3167	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-5	1231	intron_retention	FALSE	non_canonical	0	0	junction_1	271044.10133084416	NA	4	1	TRUE	NA	NA	NA	C	coding	272	819	923	1741	35.0	-35	True	ATTAAA	-27
PB.7381.7	chr20	+	3096	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	9	1231	intron_retention	FALSE	non_canonical	0	0	junction_1	271044.10133084416	NA	2	1	TRUE	NA	NA	NA	C	coding	272	819	852	1670	35.0	-21	True	ATTAAA	-27
PB.7474.19	chr21	+	1721	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	15	3078	10	-3078	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	207	1571	20.0	-56	False	TATAAA	-18
PB.7474.18	chr21	+	1937	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	0	2877	0	-2877	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	222	1586	35.0	14	True	AATAAA	-16
PB.11794.3	chr9	+	2838	2	full-splice_match	ZBTB43	ENST00000450858.1	710	2	-5	-2123	-5	-1884	multi-exon	FALSE	canonical	1	28388	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	129	1532	85.0	-12	True	GATAAA	-41
PB.7474.13	chr21	+	4010	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	-13	817	-13	-817	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	235	1599	25.0	1	True	AATAAA	-16
PB.7474.12	chr21	+	2743	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	-14	2085	-14	-2085	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	2	NA	TRUE	NA	NA	NA	C	coding	454	1365	236	1600	65.0	0	True	TATAAA	-24
PB.7474.11	chr21	+	4807	10	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	-15	2	any annotated donor/acceptor	FALSE	canonical	1	16	junction_5	29163.070361564816	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	213	1577	20.0	-1	True	AATAAA	-17
PB.7474.10	chr21	+	2339	10	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	-204	-2486	any annotated donor/acceptor	FALSE	canonical	1	16	junction_5	28829.70322599186	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	233	1597	55.0	-16	True	AATAAA	-11
PB.7474.17	chr21	+	4481	7	novel_in_catalog	GABPA	novel	5120	10	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	16	junction_2	34869.63359269623	NA	5	NA	TRUE	NA	NA	NA	C	coding	253	762	493	1254	20.0	13	True	AATAAA	-14
PB.7474.16	chr21	+	4670	9	novel_in_catalog	GABPA	novel	5120	10	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	16	junction_4	32253.996990440966	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	682	1443	20.0	12	True	AATAAA	-14
PB.7474.15	chr21	+	3320	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	39	1455	34	-1455	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	183	1547	70.0	-32	True	NA	NA
PB.7474.14	chr21	+	2124	10	full-splice_match	GABPA	ENST00000400075.3	4814	10	-13	2703	-13	-2703	multi-exon	FALSE	canonical	1	16	junction_5	30641.7704670932	NA	3	NA	TRUE	NA	NA	NA	C	coding	454	1365	235	1599	45.0	1	True	AATAAA	-16
PB.2247.12	chr11	-	1332	5	full-splice_match	TMEM123	ENST00000398136.6	3579	5	279	1968	74	520	multi-exon	FALSE	canonical	1	1666312	junction_4	306838.93885473534	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	236	769	65.0	-1	True	TTTAAA	-33
PB.6501.4	chr2	+	2170	11	novel_not_in_catalog	UGP2	novel	2136	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	793395.522546258	NA	22	3	TRUE	NA	NA	NA	C	coding	388	1167	673	1839	30.0	0	True	AATAAA	-11
PB.2247.10	chr11	-	3041	5	full-splice_match	TMEM123	ENST00000398136.6	3579	5	244	294	39	-294	multi-exon	FALSE	canonical	1	1666312	junction_4	306838.93885473534	NA	3	NA	TRUE	NA	NA	NA	C	coding	208	627	178	804	45.0	-36	True	NA	NA
PB.2247.11	chr11	-	1953	5	full-splice_match	TMEM123	ENST00000398136.6	3579	5	266	1360	61	1128	multi-exon	FALSE	canonical	1	1666312	junction_4	306838.93885473534	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	156	782	40.0	-14	True	NA	NA
PB.6501.1	chr2	+	2145	10	novel_in_catalog	UGP2	novel	2136	10	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	59	junction_1	659010.8217332668	NA	10	NA	TRUE	NA	NA	NA	C	coding	388	1167	648	1814	30.0	-3	True	AATAAA	-11
PB.6501.3	chr2	+	1866	8	novel_in_catalog	UGP2	novel	2136	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	16474	junction_1	574567.1910519665	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	369	1535	30.0	-1	True	AATAAA	-11
PB.6501.2	chr2	+	2273	11	novel_in_catalog	UGP2	novel	2136	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	39921	junction_2	640308.4479383667	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	775	1941	25.0	-2	True	AATAAA	-12
PB.7049.4	chr2	+	1698	7	full-splice_match	MFF	ENST00000354503.10	1085	7	4	-617	3	1	multi-exon	FALSE	canonical	1	191014	junction_5	140551.08410467705	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	327	983	25.0	-14	True	AATAAA	-15
PB.392.19	chr1	-	2111	8	incomplete-splice_match	EFCAB14	ENST00000371933.7	5767	11	-71	11636	-71	-2623	3prime_fragment	FALSE	canonical	1	112291	junction_6	154529.2086084144	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1062	1049	2110	60.0	-32	True	AGTAAA	-6
PB.11991.1	chrX	+	2642	16	incomplete-splice_match	CDKL5	ENST00000379996.7	3449	21	-18	33686	-18	-5	3prime_fragment	FALSE	canonical	1	22755	junction_1	8397.366244245872	NA	1	NA	TRUE	NA	NA	NA	A	coding	783	2349	294	2642	75.0	-68	False	AAAAAG	-27
PB.1121.1	chr1	+	9825	20	full-splice_match	CENPF	ENST00000366955.7	10307	20	-16	498	-16	-498	multi-exon	FALSE	canonical	1	223700	junction_1	147829.8314456969	NA	0	NA	TRUE	NA	NA	NA	C	coding	3114	9345	185	9529	15.0	-26	True	ATTAAA	-20
PB.11516.8	chr9	-	3329	16	full-splice_match	VCP	ENST00000493886.5	2942	16	-76	-311	2	311	multi-exon	FALSE	canonical	1	1397368	junction_15	602546.2983121104	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	1344	2771	5.0	-1	True	AATAAA	-22
PB.1469.12	chr10	-	1781	9	incomplete-splice_match	ANXA7	ENST00000372921.9	2452	13	9	7259	9	901	3prime_fragment	FALSE	canonical	1	905852	junction_8	393442.5019878818	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	49	981	90.0	-1	True	NA	NA
PB.1469.11	chr10	-	1982	14	novel_not_in_catalog	ANXA7	novel	2452	13	NA	NA	16	-134	any annotated donor/acceptor	FALSE	canonical	1	4572	junction_12	711022.9511059958	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	270	1670	30.0	6	True	AATAAA	-17
PB.1469.10	chr10	-	1725	12	novel_in_catalog	ANXA7	novel	2452	13	NA	NA	0	-133	combination_of_known_junctions	FALSE	canonical	1	71203	junction_11	590185.2522241856	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	132	1412	35.0	-19	True	AATAAA	-18
PB.2605.6	chr12	-	2563	11	full-splice_match	LIMA1	ENST00000341247.8	3706	11	12	1131	12	-34	multi-exon	FALSE	canonical	1	211882	junction_10	166658.17703359172	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	139	2418	80.0	-15	True	NA	NA
PB.2605.7	chr12	-	2425	9	novel_not_in_catalog	LIMA1	novel	2652	5	NA	NA	-349	-34	any annotated donor/acceptor	FALSE	canonical	1	562	junction_8	201728.3576787111	NA	2	NA	TRUE	NA	NA	NA	C	coding	599	1800	481	2280	80.0	1132	False	NA	NA
PB.2605.4	chr12	-	3679	11	full-splice_match	LIMA1	ENST00000341247.8	3706	11	25	2	-15	0	multi-exon	FALSE	canonical	1	211882	junction_10	166658.17703359172	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	126	2405	20.0	-2	True	AATAAA	-19
PB.3101.4	chr13	-	2901	1	genic	AL139383.1	novel	NA	NA	NA	NA	-11	-19220	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	14	True	NA	NA
PB.3101.2	chr13	-	2420	4	novel_not_in_catalog	AL139383.1	novel	892	6	NA	NA	-37	44659	intron_retention	FALSE	canonical	1	883	junction_1	2113.87895164842	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-12	True	NA	NA
PB.3101.3	chr13	-	2615	4	novel_not_in_catalog	AL139383.1	novel	892	6	NA	NA	-37	21831	any annotated donor/acceptor	FALSE	canonical	1	571	junction_1	2258.6955429086843	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-12	True	AATAGA	-5
PB.3101.1	chr13	-	2125	2	novel_not_in_catalog	AL139383.1	novel	892	6	NA	NA	-52	44664	intron_retention	FALSE	canonical	1	391	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.10245.1	chr6	-	4520	7	incomplete-splice_match	TXLNB	ENST00000358430.7	4753	10	20993	4	-8549	-4	5prime_fragment	FALSE	canonical	1	48134	junction_1	3412.6578921551586	NA	0	NA	TRUE	NA	NA	NA	A	coding	547	1644	416	2059	30.0	7	False	ATTAAA	-17
PB.1106.3	chr1	-	4295	7	full-splice_match	NEK2	ENST00000366998.4	1865	7	-80	-2350	-7	-555	multi-exon	FALSE	canonical	1	62912	junction_5	28134.431618076494	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	159	1313	95.0	-17	True	NA	NA
PB.1106.2	chr1	-	2123	8	novel_in_catalog	NEK2	novel	1318	8	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	52581	junction_1	30210.606349426354	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	157	1470	15.0	-15	True	AATAAA	-22
PB.6334.1	chr2	-	2549	8	full-splice_match	MATN3	ENST00000407540.7	2524	8	-26	1	-26	-1	multi-exon	FALSE	canonical	1	28381	junction_7	13200.420812710974	NA	0	NA	TRUE	NA	NA	NA	A	coding	486	1461	90	1550	20.0	95	False	AATAAA	-20
PB.1972.10	chr11	+	4110	16	novel_in_catalog	TKFC	novel	4696	18	NA	NA	8	21	intron_retention	FALSE	canonical	1	185919	junction_4	59690.51067728903	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	2884	3702	45.0	11	True	AATAAA	-13
PB.1972.11	chr11	+	2643	18	novel_in_catalog	TKFC	novel	4696	18	NA	NA	-14	26	intron_retention	FALSE	canonical	1	19197	junction_1	89671.61505196437	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	503	2230	35.0	-7946	False	AATAAA	-18
PB.9370.1	chr5	-	2723	8	full-splice_match	GIN1	ENST00000399004.6	3229	8	13	493	0	-493	multi-exon	FALSE	canonical	1	53647	junction_5	9080.844640657338	NA	11	NA	TRUE	NA	NA	NA	C	coding	522	1569	83	1651	60.0	-1	True	NA	NA
PB.10285.1	chr6	-	1900	12	full-splice_match	RMND1	ENST00000367303.9	1856	12	-31	-13	1	13	multi-exon	FALSE	canonical	1	103928	junction_11	50842.028449009755	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	157	1506	25.0	-32	True	NA	NA
PB.2353.8	chr11	+	3687	18	novel_not_in_catalog	STT3A	novel	569	5	NA	NA	11	169	intron_retention	FALSE	canonical	1	13882	junction_10	508836.90412281826	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	2493	3440	35.0	-20	True	ATTAAA	-16
PB.2353.9	chr11	+	2985	18	full-splice_match	STT3A	ENST00000392708.8	4558	18	52	1521	11	344	multi-exon	FALSE	canonical	1	1048542	junction_1	216906.22312634153	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	108	2225	30.0	-20	True	AATATA	-19
PB.3596.2	chr14	+	2515	6	novel_in_catalog	NRXN3	novel	6069	20	NA	NA	105	-28	combination_of_known_junctions	FALSE	canonical	1	8296	junction_5	23257.34648148838	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	775	2064	75.0	-794	False	NA	NA
PB.3596.1	chr14	+	3080	6	full-splice_match	NRXN3	ENST00000557594.5	3381	6	238	63	164	-28	multi-exon	FALSE	canonical	1	13150	junction_5	21941.704442453873	NA	1	NA	TRUE	NA	NA	NA	C	coding	637	1914	716	2629	75.0	2	True	NA	NA
PB.2353.2	chr11	+	2443	18	full-splice_match	STT3A	ENST00000392708.8	4558	18	81	2034	9	169	multi-exon	FALSE	canonical	1	1048542	junction_1	216906.22312634153	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	79	2196	35.0	-9476	False	ATTAAA	-16
PB.2353.3	chr11	+	2371	17	full-splice_match	STT3A	ENST00000531491.5	2160	17	-42	-169	6	169	multi-exon	FALSE	canonical	1	22624	junction_1	398884.77767064434	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	283	2124	35.0	-9527	False	ATTAAA	-16
PB.1982.1	chr11	-	2697	10	novel_in_catalog	FADS3	novel	1640	12	NA	NA	11	0	intron_retention	TRUE	canonical	1	414995	junction_9	149731.18322571568	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	116	1081	25.0	-11	True	NA	NA
PB.2353.1	chr11	+	2565	18	novel_in_catalog	STT3A	novel	569	5	NA	NA	11	169	combination_of_known_junctions	FALSE	canonical	1	964	junction_1	394608.7549194075	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	201	2318	35.0	-3238	False	ATTAAA	-16
PB.2353.6	chr11	+	2293	16	novel_in_catalog	STT3A	novel	569	5	NA	NA	8	-167	no_combination_of_known_junctions	FALSE	canonical	1	4349	junction_1	415048.0910460377	NA	3	NA	TRUE	NA	NA	NA	C	coding	613	1842	203	2044	25.0	-23	True	ATTAAA	-18
PB.2353.7	chr11	+	2847	18	full-splice_match	STT3A	ENST00000392708.8	4558	18	64	1647	1	218	multi-exon	FALSE	canonical	1	1048542	junction_1	216906.22312634153	NA	4	NA	TRUE	NA	NA	NA	C	coding	705	2118	96	2213	55.0	-8	True	TATAAA	-20
PB.2353.4	chr11	+	2547	19	novel_not_in_catalog	STT3A	novel	569	5	NA	NA	6	168	any annotated donor/acceptor	FALSE	canonical	1	13882	junction_11	494654.9532366532	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	113	1240	35.0	-25	True	ATTAAA	-15
PB.2353.5	chr11	+	2322	18	full-splice_match	STT3A	ENST00000392708.8	4558	18	48	2188	7	15	multi-exon	FALSE	canonical	1	1048542	junction_1	216906.22312634153	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	112	2229	45.0	-24	True	NA	NA
PB.10993.16	chr8	-	2285	3	incomplete-splice_match	CNOT7	ENST00000523917.5	1885	6	23	9724	0	0	3prime_fragment	FALSE	canonical	1	28667	junction_2	56612.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	277	591	90.0	1	True	NA	NA
PB.9466.23	chr5	+	2322	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	49	4566	-8	163	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	246	1634	45.0	51	True	TTTAAA	-12
PB.9466.22	chr5	+	4713	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	45	2254	-14	-2254	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	9	NA	TRUE	NA	NA	NA	C	coding	462	1389	327	1715	65.0	45	True	ATTAAA	-24
PB.9466.21	chr5	+	4109	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	37	2791	-20	1938	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	258	1646	25.0	39	True	ATTAAA	-21
PB.9466.20	chr5	+	7063	9	novel_in_catalog	SMAD5	novel	7012	8	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	9018	junction_2	125042.73698794945	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	421	1809	10.0	35	True	AATAAA	-14
PB.3342.10	chr14	-	3252	1	full-splice_match	PSME2	ENST00000559042.1	643	1	-2610	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-11	True	AATAAA	-18
PB.9420.8	chr5	+	1318	5	full-splice_match	PHAX	ENST00000297540.4	4288	5	670	2300	13	-257	multi-exon	FALSE	canonical	1	334636	junction_4	41985.22598486282	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	26	1210	30.0	-9	True	GATAAA	-17
PB.3436.1	chr14	+	2523	7	full-splice_match	GPR137C	ENST00000321662.10	3888	7	-24	1389	-24	-401	multi-exon	FALSE	canonical	1	21326	junction_3	14877.227023765776	NA	0	NA	TRUE	NA	NA	NA	A	coding	429	1290	25	1314	70.0	12	True	ATTAAA	-29
PB.5419.8	chr18	+	2530	14	incomplete-splice_match	RBBP8	ENST00000399725.6	3260	18	-11	28793	4	4124	3prime_fragment	FALSE	canonical	1	47792	junction_1	77751.06098691977	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2100	429	2528	60.0	-37	True	NA	NA
PB.5419.9	chr18	+	2153	11	incomplete-splice_match	RBBP8	ENST00000399725.6	3260	18	-10	32933	5	-16	3prime_fragment	FALSE	canonical	1	47792	junction_1	74497.33495394315	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1725	428	2152	65.0	-36	True	AATAAA	-29
PB.5419.6	chr18	+	2708	17	incomplete-splice_match	RBBP8	ENST00000327155.9	3288	19	40	9616	40	-9500	3prime_fragment	FALSE	canonical	1	167764	junction_1	52716.8200775601	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	309	2708	70.0	-20	True	NA	NA
PB.5419.7	chr18	+	3219	19	full-splice_match	RBBP8	ENST00000327155.9	3288	19	60	9	60	-9	multi-exon	FALSE	canonical	1	167764	junction_1	51144.80920899687	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	289	2982	45.0	0	True	AATACA	-7
PB.5419.4	chr18	+	2147	11	novel_not_in_catalog	RBBP8	novel	564	5	NA	NA	21	-16	any annotated donor/acceptor	FALSE	canonical	1	7379	junction_8	88463.94785447912	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	328	1071	65.0	8	True	AATAAA	-29
PB.5419.5	chr18	+	2048	11	incomplete-splice_match	RBBP8	ENST00000327155.9	3288	19	26	32933	26	-16	3prime_fragment	FALSE	canonical	1	167764	junction_1	43024.04172599316	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1725	323	2047	65.0	13	True	AATAAA	-29
PB.5419.2	chr18	+	2470	14	incomplete-splice_match	RBBP8	ENST00000327155.9	3288	19	21	28752	21	4165	3prime_fragment	FALSE	canonical	1	167764	junction_1	52927.93532082508	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2142	328	2469	15.0	8	True	AAAAAG	-6
PB.1433.12	chr10	+	2152	10	full-splice_match	HNRNPH3	ENST00000265866.11	2339	10	-11	198	-11	-198	multi-exon	FALSE	canonical	1	841758	junction_1	537410.0367184984	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	177	1217	15.0	0	True	AATAAA	-30
PB.5419.1	chr18	+	3166	18	novel_not_in_catalog	RBBP8	novel	564	5	NA	NA	13	-9	any annotated donor/acceptor	FALSE	canonical	1	4596	junction_16	106710.56173535698	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	336	2936	45.0	0	True	AATACA	-7
PB.11201.1	chr8	-	2315	5	full-splice_match	HEY1	ENST00000354724.7	2293	5	62	-84	-17	84	multi-exon	FALSE	canonical	1	176246	junction_2	22921.018814616422	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	139	1053	15.0	-1	True	GATAAA	-25
PB.1138.1	chr1	+	1756	2	full-splice_match	TAF1A-AS1	ENST00000413074.1	1313	2	-30	-413	1	413	multi-exon	FALSE	canonical	1	30399	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-30	False	NA	NA
PB.11201.3	chr8	-	3507	2	full-splice_match	HEY1	ENST00000519075.1	701	2	94	-2900	94	-21	multi-exon	FALSE	canonical	1	231255	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	225	678	1676	2353	80.0	1013	False	NA	NA
PB.11201.2	chr8	-	3631	1	novel_in_catalog	HEY1	novel	2293	5	NA	NA	96	-21	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	225	678	1800	2477	80.0	1015	False	NA	NA
PB.11201.5	chr8	-	2499	4	novel_not_in_catalog	HEY1	novel	2293	5	NA	NA	-17	-21	intron_retention	FALSE	non_canonical	0	0	junction_2	99432.98455743949	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	716	1345	80.0	-1	True	NA	NA
PB.11201.4	chr8	-	3488	2	full-splice_match	HEY1	ENST00000523531.1	568	2	56	-2976	-17	-21	multi-exon	FALSE	canonical	1	177539	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	225	678	1657	2334	80.0	-1	True	NA	NA
PB.11201.7	chr8	-	2056	5	full-splice_match	HEY1	ENST00000354724.7	2293	5	213	24	110	-21	multi-exon	FALSE	canonical	1	176246	junction_2	22921.018814616422	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	102	902	80.0	1029	False	NA	NA
PB.11201.6	chr8	-	2301	4	novel_in_catalog	HEY1	novel	2293	5	NA	NA	-9	-21	intron_retention	FALSE	canonical	1	176246	junction_2	2383.908042596349	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	518	1147	80.0	-3	True	NA	NA
PB.10251.1	chr6	-	2081	6	full-splice_match	ADAT2	ENST00000237283.8	2065	6	-18	2	-18	-2	multi-exon	FALSE	non_canonical	0	0	junction_3	75822.03142464596	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	34	609	25.0	3	True	TTTAAA	-17
PB.11201.8	chr8	-	2125	4	novel_in_catalog	HEY1	novel	2293	5	NA	NA	-17	-21	no_combination_of_known_junctions	FALSE	canonical	1	238	junction_1	98708.27250370997	NA	1	1	TRUE	NA	NA	NA	C	coding	110	333	139	471	80.0	-1	True	NA	NA
PB.10251.3	chr6	-	4257	7	novel_in_catalog	ADAT2	novel	6651	6	NA	NA	-22	-1362	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	76886.50217907778	NA	5	NA	TRUE	NA	NA	NA	C	coding	144	435	3711	4145	30.0	-1	True	NA	NA
PB.10251.2	chr6	-	1867	6	full-splice_match	ADAT2	ENST00000237283.8	2065	6	-35	233	-35	-233	multi-exon	FALSE	non_canonical	0	0	junction_3	75822.03142464596	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	51	626	30.0	-14	True	NA	NA
PB.10251.4	chr6	-	1980	3	novel_not_in_catalog	ADAT2	novel	2065	6	NA	NA	5	1397	any annotated donor/acceptor	FALSE	canonical	1	27952	junction_2	1939.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	26	True	NA	NA
PB.3344.11	chr14	+	1770	9	novel_not_in_catalog	AL136295.5	novel	4798	21	NA	NA	10453	-839	any annotated donor/acceptor	FALSE	canonical	1	25380	junction_1	240682.01073408042	NA	3	NA	TRUE	NA	NA	NA	B	coding	393	1182	222	1403	25.0	-4723	False	AATAAA	-17
PB.3344.10	chr14	+	2361	9	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10100	-839	intron_retention	FALSE	canonical	1	33686	junction_7	238300.65426197954	NA	1	NA	TRUE	NA	NA	NA	B	coding	373	1122	23	1144	25.0	25	True	AATAAA	-17
PB.3344.13	chr14	+	3106	7	novel_not_in_catalog	AL136295.5	novel	4798	21	NA	NA	10487	-839	intron_retention	FALSE	canonical	1	25380	junction_1	275419.55821296026	NA	1	NA	TRUE	NA	NA	NA	B	coding	221	666	188	853	25.0	5	True	AATAAA	-17
PB.3344.12	chr14	+	2243	8	novel_not_in_catalog	AL136295.5	novel	4798	21	NA	NA	10459	-839	intron_retention	FALSE	canonical	1	25380	junction_1	255059.19830078023	NA	0	NA	TRUE	NA	NA	NA	B	coding	221	666	216	881	25.0	-4717	False	AATAAA	-17
PB.11831.6	chr9	+	2028	1	novel_in_catalog	TBC1D13	novel	3906	12	NA	NA	19	-7814	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	172	519	1	519	100.0	-11	True	NA	NA
PB.11831.4	chr9	+	2119	2	novel_not_in_catalog	TBC1D13	novel	3906	12	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	100	303	1210	1512	15.0	-35	True	AATAAA	-21
PB.11831.5	chr9	+	2144	4	novel_not_in_catalog	TBC1D13	novel	3906	12	NA	NA	7	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	114262.12711422217	NA	0	NA	TRUE	NA	NA	NA	C	coding	87	264	78	341	15.0	-23	True	AATAAA	-21
PB.3545.2	chr14	-	1622	1	antisense	novelGene_ACOT2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	123	372	1	372	25.0	60	False	NA	NA
PB.3545.1	chr14	-	1914	1	antisense	novelGene_ACOT2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	123	372	1	372	30.0	60	False	NA	NA
PB.9213.2	chr5	-	2187	11	novel_in_catalog	C5orf34	novel	2507	13	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	5869	junction_10	27737.346571725277	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	401	1975	25.0	-1	True	AATAAA	-21
PB.5608.1	chr19	+	2024	15	full-splice_match	NCLN	ENST00000246117.8	4005	15	267	1714	-69	0	multi-exon	FALSE	canonical	1	399515	junction_1	194538.8784787645	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	165	1856	15.0	-118	False	NA	NA
PB.8397.36	chr3	+	3581	28	full-splice_match	ATP2C1	ENST00000510168.5	5067	28	154	1332	-56	433	multi-exon	FALSE	canonical	1	56424	junction_1	239457.59833480822	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	397	3156	25.0	-1	True	AATACA	-26
PB.11823.4	chr9	+	3383	21	novel_in_catalog	ODF2	novel	578	5	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	89346	junction_4	105337.75450894849	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	262	2679	25.0	-4453	False	AAAAAG	-16
PB.10145.1	chr6	+	1689	13	full-splice_match	AFG1L	ENST00000368977.8	5208	13	-18	3537	-18	-1	multi-exon	FALSE	canonical	1	31693	junction_1	8132.1453004419445	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	205	1650	35.0	1	True	AATAAA	-18
PB.10145.3	chr6	+	4669	13	full-splice_match	AFG1L	ENST00000368977.8	5208	13	79	460	-18	-460	multi-exon	FALSE	canonical	1	31693	junction_1	8132.1453004419445	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	108	1553	40.0	0	True	ATTAAA	-12
PB.10145.2	chr6	+	3592	13	full-splice_match	AFG1L	ENST00000368977.8	5208	13	78	1538	-19	1346	multi-exon	FALSE	canonical	1	31693	junction_1	8132.1453004419445	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	109	1554	45.0	-1	True	NA	NA
PB.11121.6	chr8	+	4313	19	novel_in_catalog	HGSNAT	novel	5236	18	NA	NA	9	-1032	combination_of_known_junctions	FALSE	canonical	1	596	junction_6	92084.6470928907	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	1040	2059	40.0	-33	True	NA	NA
PB.11780.4	chr9	+	4660	9	incomplete-splice_match	NEK6	ENST00000320246.9	3447	10	-49	1850	-42	-981	intron_retention	FALSE	canonical	1	180815	junction_1	174872.79024903895	NA	4	NA	TRUE	NA	NA	NA	C	coding	295	888	195	1082	25.0	-4995	False	GATAAA	-24
PB.9398.3	chr5	-	2713	9	full-splice_match	PGGT1B	ENST00000419445.5	9545	9	4	6828	-3	1562	multi-exon	FALSE	canonical	1	27623	junction_5	64538.18892318234	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	18	1151	35.0	-10	True	AATAAA	-35
PB.11136.8	chr8	-	1789	8	full-splice_match	TMEM68	ENST00000434581.6	2549	8	-24	784	0	159	multi-exon	FALSE	canonical	1	118103	junction_7	25934.66997779503	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	225	1199	35.0	-1	True	AATAAA	-22
PB.8563.24	chr3	+	2824	16	incomplete-splice_match	EIF4G1	ENST00000392537.6	5229	30	48	10053	-16	-1	3prime_fragment	FALSE	canonical	1	50683	junction_1	701267.0097619466	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2622	203	2824	70.0	-16	True	NA	NA
PB.3893.2	chr15	+	5403	1	full-splice_match	LINC00926	ENST00000613170.1	1470	1	-3944	11	1991	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	112	339	4733	5071	40.0	-4254	False	NA	NA
PB.3893.1	chr15	+	4893	4	novel_not_in_catalog	LINC00926	novel	624	2	NA	NA	-35	0	intron_retention	FALSE	canonical	1	16060	junction_1	40197.541627429026	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-6280	False	NA	NA
PB.10159.1	chr6	+	786	6	full-splice_match	GTF3C6	ENST00000329970.7	952	6	146	20	146	-20	multi-exon	FALSE	canonical	1	80575	junction_3	267127.5549100841	NA	0	NA	TRUE	NA	NA	NA	A	coding	213	642	65	706	25.0	0	True	CATAAA	-14
PB.11825.9	chr9	+	6424	46	incomplete-splice_match	SPTAN1	ENST00000372731.8	7889	56	28361	3	-34	0	5prime_fragment	FALSE	canonical	1	637259	junction_12	344334.1757162949	NA	0	NA	TRUE	NA	NA	NA	C	coding	2006	6021	79	6099	20.0	-8676	False	AATAAA	-15
PB.7744.14	chr22	-	4104	9	novel_not_in_catalog	FOXRED2	novel	4967	9	NA	NA	0	-15	intron_retention	TRUE	non_canonical	0	0	junction_1	63850.970562318	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	622	2676	90.0	-4	True	NA	NA
PB.11825.1	chr9	+	7857	56	full-splice_match	SPTAN1	ENST00000372731.8	7889	56	29	3	0	0	multi-exon	FALSE	canonical	1	401961	junction_1	359705.06208256254	NA	0	NA	TRUE	NA	NA	NA	C	coding	2472	7419	114	7532	20.0	0	True	AATAAA	-15
PB.11825.3	chr9	+	7872	57	full-splice_match	SPTAN1	ENST00000372739.5	7868	57	-3	-1	0	0	multi-exon	FALSE	canonical	1	355006	junction_37	387500.69458049623	NA	1	NA	TRUE	NA	NA	NA	C	coding	2477	7434	114	7547	20.0	0	True	AATAAA	-15
PB.11825.2	chr9	+	7839	55	novel_in_catalog	SPTAN1	novel	7889	56	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	176748	junction_49	388117.8741371948	NA	0	NA	TRUE	NA	NA	NA	C	coding	2466	7401	114	7514	20.0	0	True	AATAAA	-15
PB.11825.5	chr9	+	7797	55	full-splice_match	SPTAN1	ENST00000358161.9	7794	55	-6	3	0	0	multi-exon	FALSE	canonical	1	297572	junction_22	370049.707342627	NA	0	NA	TRUE	NA	NA	NA	C	coding	2452	7359	114	7472	20.0	0	True	AATAAA	-15
PB.11825.4	chr9	+	7854	56	novel_in_catalog	SPTAN1	novel	7889	56	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	176748	junction_50	412579.50186503853	NA	0	NA	TRUE	NA	NA	NA	C	coding	2471	7416	114	7529	20.0	0	True	AATAAA	-15
PB.11825.7	chr9	+	6842	24	novel_in_catalog	SPTAN1	novel	7889	56	NA	NA	1	-20	intron_retention	FALSE	canonical	1	401961	junction_1	196053.55606117076	NA	4	1	TRUE	NA	NA	NA	C	coding	1052	3159	113	3271	95.0	1	True	NA	NA
PB.8227.1	chr3	-	2708	22	novel_in_catalog	FOXP1	novel	8994	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	1148	junction_18	131029.29094907285	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	642	2672	90.0	108	False	AATGAA	-7
PB.2827.8	chr12	-	4759	21	full-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-25	434	-25	-367	multi-exon	FALSE	canonical	1	107717	junction_9	42817.73496122839	NA	0	NA	TRUE	NA	NA	NA	C	coding	1464	4395	239	4633	30.0	-9	True	AATAAA	-16
PB.5883.6	chr19	-	1819	5	full-splice_match	ZNF100	ENST00000358296.10	5745	5	49	3877	-30	-114	multi-exon	FALSE	canonical	1	39589	junction_2	12598.434565452964	NA	1	1	TRUE	NA	NA	NA	C	coding	542	1629	151	1779	65.0	-7	True	NA	NA
PB.5883.5	chr19	-	2964	5	full-splice_match	ZNF100	ENST00000358296.10	5745	5	58	2723	-21	704	multi-exon	FALSE	canonical	1	39589	junction_2	12598.434565452964	NA	2	NA	TRUE	NA	NA	NA	C	coding	542	1629	142	1770	50.0	2	True	ATTAAA	-18
PB.5883.4	chr19	-	3894	4	novel_in_catalog	ZNF100	novel	5745	5	NA	NA	38	1713	intron_retention	FALSE	canonical	1	4592	junction_1	30564.678077807395	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	162	1691	30.0	-18	False	AATAAA	-36
PB.5883.3	chr19	-	3776	3	novel_in_catalog	ZNF100	novel	5745	5	NA	NA	38	-1705	intron_retention	FALSE	canonical	1	6547	junction_1	32784.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	581	1564	40.0	-18	False	AATAAA	-45
PB.5883.2	chr19	-	4009	5	full-splice_match	ZNF100	ENST00000358296.10	5745	5	31	1705	31	-1705	multi-exon	FALSE	canonical	1	39589	junction_2	12598.434565452964	NA	4	NA	TRUE	NA	NA	NA	C	coding	542	1629	169	1797	40.0	-25	False	AATAAA	-45
PB.5883.1	chr19	-	4426	5	full-splice_match	ZNF100	ENST00000358296.10	5745	5	47	1272	-32	-1272	multi-exon	FALSE	canonical	1	39589	junction_2	12598.434565452964	NA	2	NA	TRUE	NA	NA	NA	C	coding	542	1629	153	1781	15.0	-9	True	TATAAA	-25
PB.817.14	chr1	+	2616	9	novel_in_catalog	LMNA	novel	570	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	3486694	junction_1	2813955.1737780906	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	209	1399	5.0	0	True	ATTAAA	-18
PB.2827.1	chr12	-	6873	21	novel_in_catalog	UHRF1BP1L	novel	713	4	NA	NA	-25	2204	combination_of_known_junctions	FALSE	canonical	1	9575	junction_1	55464.86149128563	NA	7	NA	TRUE	NA	NA	NA	C	coding	1443	4332	239	4570	20.0	-9	True	NA	NA
PB.2827.2	chr12	-	4662	21	novel_in_catalog	UHRF1BP1L	novel	713	4	NA	NA	-25	-7	combination_of_known_junctions	FALSE	canonical	1	9575	junction_1	55464.86149128563	NA	0	NA	TRUE	NA	NA	NA	C	coding	1443	4332	239	4570	50.0	-9	True	TATAAA	-38
PB.2827.3	chr12	-	5482	21	full-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-24	-290	-24	290	multi-exon	FALSE	canonical	1	107717	junction_9	42817.73496122839	NA	1	NA	TRUE	NA	NA	NA	C	coding	1464	4395	238	4632	20.0	-8	True	TATAAA	-26
PB.2827.4	chr12	-	5229	21	full-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-35	-26	-35	26	multi-exon	FALSE	canonical	1	107717	junction_9	42817.73496122839	NA	1	NA	TRUE	NA	NA	NA	C	coding	1464	4395	249	4643	50.0	-19	True	NA	NA
PB.2827.5	chr12	-	5343	22	novel_in_catalog	UHRF1BP1L	novel	713	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	15107	junction_21	62989.78786277767	NA	2	NA	TRUE	NA	NA	NA	C	coding	1416	4251	533	4783	45.0	-13	True	AATAAA	-22
PB.2827.6	chr12	-	5130	21	novel_not_in_catalog	UHRF1BP1L	novel	713	4	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	1	6810	junction_11	56461.203735839714	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	1535	4570	45.0	-1	True	AATAAA	-22
PB.2827.7	chr12	-	5133	21	full-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-29	64	-29	3	multi-exon	FALSE	canonical	1	107717	junction_9	42817.73496122839	NA	0	NA	TRUE	NA	NA	NA	C	coding	1464	4395	243	4637	40.0	-13	True	ATTAAA	-18
PB.6786.24	chr2	-	2135	19	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	2	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	332491.0681648939	NA	4	2	TRUE	NA	NA	NA	B	coding	421	1266	646	1911	60.0	5	True	NA	NA
PB.5902.2	chr19	+	6053	19	full-splice_match	DPY19L3	ENST00000342179.9	6015	19	-36	-2	-36	2	multi-exon	FALSE	canonical	1	19796	junction_2	44518.902383956214	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	252	2402	25.0	-3	True	AGTAAA	-18
PB.5902.1	chr19	+	6043	19	full-splice_match	DPY19L3	ENST00000392250.6	5998	19	-44	-1	-44	1	multi-exon	FALSE	canonical	1	19796	junction_2	45955.1610919563	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	243	2393	25.0	-420	False	AGTAAA	-17
PB.7127.5	chr20	-	4939	13	full-splice_match	CSNK2A1	ENST00000646561.1	12912	13	47	7926	-1	686	multi-exon	FALSE	canonical	1	76	junction_11	95937.8185682731	NA	2	NA	TRUE	NA	NA	NA	C	coding	391	1176	227	1402	10.0	1	True	ATTAAA	-20
PB.8693.1	chr4	-	7492	17	full-splice_match	AFAP1	ENST00000358461.6	7516	17	26	-2	26	1	multi-exon	TRUE	canonical	1	101100	junction_16	35666.424432631225	NA	6	NA	TRUE	NA	NA	NA	C	coding	730	2193	248	2440	5.0	-23	False	AATAAA	-15
PB.10371.2	chr7	-	2589	13	novel_in_catalog	BRAT1	novel	2915	14	NA	NA	170	25	combination_of_known_junctions	TRUE	canonical	1	22985	junction_10	135707.52789229818	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	789	2372	25.0	-1	True	AATAAA	-22
PB.10371.3	chr7	-	3986	12	novel_in_catalog	BRAT1	novel	2915	14	NA	NA	178	24	intron_retention	FALSE	canonical	1	152012	junction_11	104409.28328117791	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	1470	3770	25.0	7	True	AATAAA	-21
PB.10371.1	chr7	-	2726	14	full-splice_match	BRAT1	ENST00000340611.8	2915	14	213	-24	180	24	multi-exon	FALSE	canonical	1	152012	junction_13	96772.99862794264	NA	2	NA	TRUE	NA	NA	NA	C	coding	821	2466	45	2510	25.0	9	True	AATAAA	-21
PB.10371.6	chr7	-	2873	15	novel_not_in_catalog	BRAT1	novel	2915	14	NA	NA	157	24	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_4	153012.17072255915	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	68	1657	25.0	7	True	AATAAA	-21
PB.10371.7	chr7	-	2818	15	novel_not_in_catalog	BRAT1	novel	2915	14	NA	NA	147	24	any annotated donor/acceptor	FALSE	canonical	1	5722	junction_12	154499.57727219097	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	662	2602	25.0	-3	True	AATAAA	-21
PB.7341.18	chr20	+	3083	24	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	8	-366	no_combination_of_known_junctions	FALSE	canonical	1	2033	junction_1	339990.9818507172	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	317	2935	35.0	-19	True	ATTAAA	-16
PB.7341.19	chr20	+	3565	26	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	9	-4	any annotated donor/acceptor	FALSE	canonical	1	30490	junction_25	381438.6010779842	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	115	2952	35.0	-18	True	AATAAA	-21
PB.7341.16	chr20	+	3539	25	full-splice_match	CSE1L	ENST00000262982.2	3553	25	8	6	8	-6	multi-exon	FALSE	canonical	1	837841	junction_2	236555.9625102248	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	116	3031	40.0	-19	True	AATAAA	-19
PB.7341.17	chr20	+	3609	21	incomplete-splice_match	CSE1L	ENST00000262982.2	3553	25	8	4801	8	-4801	intron_retention	FALSE	canonical	1	837841	junction_2	197738.48293224943	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	116	2488	50.0	-19	True	NA	NA
PB.7341.14	chr20	+	3631	24	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	7	-360	intron_retention	FALSE	canonical	1	837841	junction_2	221393.46135221806	NA	0	NA	TRUE	NA	NA	NA	C	coding	865	2598	117	2714	25.0	-20	True	ATTAAA	-22
PB.7341.15	chr20	+	3069	24	incomplete-splice_match	CSE1L	ENST00000262982.2	3553	25	7	1862	7	-1862	3prime_fragment	FALSE	canonical	1	837841	junction_2	218074.43273586646	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	117	3005	30.0	-20	True	AATAAA	-24
PB.7341.12	chr20	+	3120	24	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	6	-368	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	347093.2795418642	NA	12	2	TRUE	NA	NA	NA	C	coding	789	2370	118	2487	35.0	-21	True	ATTAAA	-14
PB.7341.13	chr20	+	2979	23	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	6	-366	no_combination_of_known_junctions	FALSE	canonical	1	9646	junction_15	356089.8608745132	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	118	1794	35.0	-21	True	ATTAAA	-16
PB.7341.10	chr20	+	3208	25	novel_not_in_catalog	CSE1L	novel	3459	24	NA	NA	5	-367	any annotated donor/acceptor	FALSE	canonical	1	24	junction_2	335941.77451802226	NA	2	NA	TRUE	NA	NA	NA	C	coding	872	2619	443	3061	35.0	-22	True	ATTAAA	-15
PB.7341.11	chr20	+	3354	25	novel_in_catalog	CSE1L	novel	3459	24	NA	NA	6	-366	combination_of_known_junctions	FALSE	canonical	1	78727	junction_24	313860.0889441026	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	118	2955	35.0	-21	True	ATTAAA	-16
PB.5504.28	chr18	-	3630	30	full-splice_match	PIGN	ENST00000357637.10	4723	30	-17	1110	1	-1	multi-exon	FALSE	canonical	0	0	junction_18	47549.61368063015	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	322	3117	20.0	-63	True	AATAAA	-16
PB.5504.29	chr18	-	3548	30	full-splice_match	PIGN	ENST00000638936.1	4233	30	-25	710	14	-2	multi-exon	FALSE	canonical	0	0	junction_18	50846.544384434696	NA	5	NA	TRUE	NA	NA	NA	C	coding	931	2796	241	3036	20.0	-112	False	AATAAA	-15
PB.10050.1	chr6	-	2518	1	full-splice_match	AL135905.1	ENST00000584934.1	1404	1	-1125	11	-1125	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	98	297	2	298	65.0	66	False	AATAAA	-7
PB.5504.20	chr18	-	3832	32	novel_in_catalog	PIGN	novel	2493	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	56586.03025361156	NA	3	NA	TRUE	NA	NA	NA	C	coding	970	2913	406	3318	20.0	-21	True	AATAAA	-17
PB.5504.21	chr18	-	3751	31	full-splice_match	PIGN	ENST00000640252.1	7924	31	-5	4178	0	0	multi-exon	FALSE	canonical	0	0	junction_18	47373.01069841585	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	442	3237	20.0	-57	True	AATAAA	-17
PB.5504.22	chr18	-	3649	30	full-splice_match	PIGN	ENST00000400334.7	4456	30	14	793	0	0	multi-exon	FALSE	canonical	0	0	junction_18	46705.61188118827	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	340	3135	20.0	-32	True	AATAAA	-17
PB.5504.23	chr18	-	3616	31	novel_in_catalog	PIGN	novel	2493	25	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	51252.05426512732	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	307	3102	20.0	-101	False	AATAAA	-17
PB.5504.24	chr18	-	3509	29	full-splice_match	PIGN	ENST00000640876.1	6045	29	46	2490	5	0	multi-exon	FALSE	canonical	0	0	junction_18	42182.547451523125	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	200	2995	20.0	-18	True	AATAAA	-17
PB.5504.25	chr18	-	3452	30	novel_in_catalog	PIGN	novel	2493	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	48729.66611694772	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	143	2938	20.0	-63	True	AATAAA	-17
PB.693.14	chr1	+	2351	17	full-splice_match	CHD1L	ENST00000369259.4	2358	17	6	1	6	-1	multi-exon	FALSE	canonical	1	6626	junction_1	149351.93324572124	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	15	2096	5.0	4	True	AATAAA	-17
PB.6515.3	chr2	-	1264	6	novel_in_catalog	C1D	novel	2233	5	NA	NA	-1	6	no_combination_of_known_junctions	FALSE	canonical	1	467	junction_2	25581.301283554752	NA	2	1	TRUE	NA	NA	NA	C	coding	141	426	153	578	15.0	-21	True	AATAAA	-21
PB.6629.1	chr2	+	2508	4	novel_not_in_catalog	STARD7-AS1	novel	1527	3	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	canonical	1	14436	junction_3	3397.792453278387	NA	0	NA	TRUE	NA	NA	NA	B	coding	121	366	1400	1765	25.0	-20	True	NA	NA
PB.6629.2	chr2	+	3231	1	genic	STARD7-AS1	novel	NA	NA	NA	NA	-27	-29133	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	215	648	241	888	75.0	-18	True	NA	NA
PB.6629.3	chr2	+	3680	3	novel_not_in_catalog	STARD7-AS1	novel	1527	3	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	17031	junction_1	2775.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	122	369	1384	1752	25.0	-4	True	NA	NA
PB.9656.3	chr5	+	3760	10	novel_in_catalog	RMND5B	novel	1929	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	22056	junction_1	181249.34248647024	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	47	1228	25.0	4	True	NA	NA
PB.9656.2	chr5	+	1911	11	full-splice_match	RMND5B	ENST00000313386.8	1929	11	18	0	0	0	multi-exon	FALSE	canonical	1	68532	junction_1	169867.0494187734	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	194	1375	15.0	-3	True	NA	NA
PB.9656.1	chr5	+	3910	11	full-splice_match	RMND5B	ENST00000313386.8	1929	11	16	-1997	1	0	multi-exon	FALSE	canonical	1	68532	junction_1	169867.0494187734	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	196	1377	25.0	-5	True	NA	NA
PB.8066.4	chr3	+	4303	22	full-splice_match	LARS2	ENST00000645846.1	4211	22	0	-92	0	92	multi-exon	FALSE	canonical	1	87971	junction_1	36169.18074054452	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	193	2904	10.0	0	True	NA	NA
PB.8066.3	chr3	+	4356	23	novel_not_in_catalog	LARS2	novel	4281	22	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	1549	junction_21	59286.16536297723	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	205	2697	25.0	-12	True	AATAAA	-16
PB.8066.2	chr3	+	4174	21	full-splice_match	LARS2	ENST00000415258.5	4744	21	-15	585	-15	-1	multi-exon	FALSE	canonical	1	12316	junction_1	45171.112594334	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	157	2868	30.0	-73	False	AATAAA	-17
PB.9656.5	chr5	+	2051	10	novel_in_catalog	RMND5B	novel	1929	11	NA	NA	18	-1	intron_retention	FALSE	canonical	1	202793	junction_2	150075.98150698183	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	337	1518	15.0	-4	True	NA	NA
PB.9656.4	chr5	+	4061	10	novel_in_catalog	RMND5B	novel	1929	11	NA	NA	10	2	intron_retention	FALSE	canonical	1	202793	junction_2	150075.98150698183	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	345	1526	20.0	-38	False	NA	NA
PB.5893.1	chr19	+	3293	3	novel_in_catalog	AC079466.1	novel	4453	4	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	928	junction_2	38090.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1279	1665	20.0	-646	False	NA	NA
PB.5893.2	chr19	+	5062	3	novel_in_catalog	AC079466.1	novel	4453	4	NA	NA	40	-1	intron_retention	FALSE	canonical	1	77108	junction_1	10010.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	912	1427	20.0	-593	False	NA	NA
PB.5893.3	chr19	+	3536	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	42	0	any annotated donor/acceptor	FALSE	canonical	1	19698	junction_3	21990.794123621366	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	227	778	20.0	-1	True	NA	NA
PB.5893.4	chr19	+	4410	4	full-splice_match	AC079466.1	ENST00000587961.1	4453	4	43	0	43	0	multi-exon	FALSE	canonical	1	54614	junction_2	17366.06087235163	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	226	774	20.0	0	True	NA	NA
PB.5893.5	chr19	+	4245	4	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-1	intron_retention	FALSE	canonical	1	9407	junction_2	28158.991707800902	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	909	1343	20.0	0	True	NA	NA
PB.5893.6	chr19	+	4264	4	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-1	intron_retention	FALSE	canonical	1	12879	junction_2	35938.309553393796	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	909	1469	20.0	0	True	NA	NA
PB.5893.7	chr19	+	3628	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	0	any annotated donor/acceptor	FALSE	canonical	1	19698	junction_3	28749.631180242992	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	226	813	20.0	0	True	NA	NA
PB.5869.3	chr19	+	2390	2	full-splice_match	ZNF253	ENST00000355650.4	2268	2	-59	-63	-38	63	multi-exon	FALSE	canonical	1	17692	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	155	1426	45.0	-2	True	AATAAA	-13
PB.5869.2	chr19	+	3370	4	full-splice_match	ZNF253	ENST00000589717.1	3519	4	-74	223	-55	-223	multi-exon	FALSE	canonical	1	44467	junction_2	11148.177818220638	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	167	1666	45.0	-19	True	ATTAAA	-18
PB.1732.10	chr11	+	2332	10	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	1	12326	junction_2	288576.80644325464	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	51	1574	50.0	4	True	AATAAA	-15
PB.1732.11	chr11	+	2795	8	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	8	-5	intron_retention	FALSE	canonical	1	619342	junction_1	140521.99631142075	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	48	1526	50.0	7	True	AATAAA	-15
PB.392.14	chr1	-	3076	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	-56	2747	-56	357	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	1034	2521	35.0	-17	True	ATTAAA	-25
PB.5869.6	chr19	+	2486	4	novel_not_in_catalog	ZNF253	novel	820	3	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	201	junction_2	29312.54591846676	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	115	1593	45.0	-3	True	AATACA	-11
PB.5869.5	chr19	+	2330	4	full-splice_match	ZNF253	ENST00000589717.1	3519	4	-23	1212	-4	-186	multi-exon	FALSE	canonical	1	44467	junction_2	11148.177818220638	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	116	1615	45.0	-4	True	AATAAA	-29
PB.5869.4	chr19	+	2968	1	genic	ZNF253	novel	NA	NA	NA	NA	-23	-9865	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	57	174	135	308	65.0	13	True	NA	NA
PB.7369.2	chr20	+	2014	6	novel_in_catalog	CSTF1	novel	585	2	NA	NA	-9	-203	combination_of_known_junctions	FALSE	canonical	1	77726	junction_1	171643.3229829812	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	187	1482	25.0	-3	True	AATAAA	-19
PB.5934.1	chr19	+	1606	9	novel_in_catalog	RBM42	novel	1609	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	163128	junction_4	302740.00288283674	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	121	1476	20.0	-2	True	AATAAA	-16
PB.5934.2	chr19	+	1698	10	full-splice_match	RBM42	ENST00000262633.8	1680	10	-13	-5	6	5	multi-exon	FALSE	canonical	1	316353	junction_4	284824.9623926081	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	119	1561	20.0	0	True	AATAAA	-23
PB.7369.1	chr20	+	1809	6	novel_in_catalog	CSTF1	novel	585	2	NA	NA	10	-412	combination_of_known_junctions	FALSE	canonical	1	77726	junction_1	171643.3229829812	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	191	1486	15.0	-7	True	ATTAAA	-17
PB.7369.6	chr20	+	2160	6	full-splice_match	CSTF1	ENST00000217109.8	4290	6	233	1897	-24	10	multi-exon	FALSE	canonical	1	210221	junction_1	125309.12079270207	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	120	1415	10.0	-27	True	ATTAAA	-25
PB.4504.12	chr16	+	4289	10	full-splice_match	NFATC3	ENST00000567152.5	3186	10	-677	-426	100	-37	multi-exon	FALSE	canonical	1	296	junction_1	79767.83985625619	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	2073	3863	100.0	0	True	TTTAAA	-32
PB.7369.4	chr20	+	3475	5	novel_in_catalog	CSTF1	novel	585	2	NA	NA	-6	-207	intron_retention	FALSE	canonical	1	77726	junction_1	191680.0214106833	NA	7	NA	TRUE	NA	NA	NA	C	coding	374	1125	1823	2947	20.0	17	True	AATAAA	-15
PB.7369.5	chr20	+	1756	6	full-splice_match	CSTF1	ENST00000217109.8	4290	6	221	2313	-36	-406	multi-exon	FALSE	canonical	1	210221	junction_1	125309.12079270207	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	132	1427	15.0	-39	True	ATTAAA	-23
PB.1667.5	chr10	-	2215	3	incomplete-splice_match	HSPA12A	ENST00000369209.7	5722	12	-19	32122	-19	-2360	3prime_fragment	FALSE	canonical	1	27712	junction_2	25917.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	85	258	125	382	25.0	1	True	AATAAA	-16
PB.1667.4	chr10	-	4981	4	novel_in_catalog	HSPA12A	novel	5722	12	NA	NA	-19	-201	intron_retention	FALSE	canonical	1	27712	junction_3	25660.52805813283	NA	2	NA	TRUE	NA	NA	NA	C	coding	85	258	125	382	70.0	1	True	NA	NA
PB.1667.3	chr10	-	3227	12	full-splice_match	HSPA12A	ENST00000369209.7	5722	12	-19	2514	-19	-2514	multi-exon	FALSE	canonical	1	27712	junction_11	17832.29327942163	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	125	2152	50.0	1	True	ATTAAA	-25
PB.1667.2	chr10	-	4351	12	full-splice_match	HSPA12A	ENST00000369209.7	5722	12	-44	1415	-44	-1415	multi-exon	FALSE	canonical	1	27712	junction_11	17832.29327942163	NA	1	NA	TRUE	NA	NA	NA	C	coding	675	2028	150	2177	20.0	-24	False	AAAAAG	-44
PB.1667.1	chr10	-	5742	12	full-splice_match	HSPA12A	ENST00000369209.7	5722	12	-21	1	-21	-1	multi-exon	TRUE	canonical	1	27712	junction_11	17832.29327942163	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	127	2154	15.0	-1	True	AATAAA	-18
PB.485.7	chr1	+	5589	17	novel_not_in_catalog	MIGA1	novel	5288	16	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	37640.07125038919	NA	5	1	TRUE	NA	NA	NA	C	coding	633	1902	19	1920	20.0	-20	True	AATAAA	-12
PB.485.6	chr1	+	5251	16	full-splice_match	MIGA1	ENST00000443751.3	6409	16	13	1145	1	16	multi-exon	FALSE	canonical	1	39843	junction_14	27265.61813582976	NA	3	NA	TRUE	NA	NA	NA	C	coding	633	1902	20	1921	100.0	-21	True	NA	NA
PB.10365.1	chr7	+	2796	1	novel_in_catalog	PSMG3-AS1	novel	5701	4	NA	NA	-1	-3179	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	140	423	835	1257	40.0	6	True	AATAAA	-26
PB.392.15	chr1	-	2497	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	212	3058	212	46	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	766	2253	60.0	251	False	TTTAAA	-7
PB.3367.8	chr14	+	1916	21	novel_in_catalog	SCFD1	novel	2359	25	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	199	junction_19	183137.31090126745	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	13	1734	50.0	8	True	ATTAAA	-14
PB.3367.9	chr14	+	2040	24	novel_in_catalog	SCFD1	novel	2359	25	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	7810	junction_16	198658.00953622794	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	12	1475	55.0	9	True	ATTAAA	-12
PB.485.4	chr1	+	5086	16	full-splice_match	MIGA1	ENST00000370791.7	5288	16	12	190	0	-94	multi-exon	FALSE	canonical	1	81529	junction_15	21145.461347112345	NA	7	1	TRUE	NA	NA	NA	C	coding	632	1899	21	1919	65.0	-22	True	NA	NA
PB.3367.1	chr14	+	2219	25	novel_in_catalog	SCFD1	novel	2359	25	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	1	12207	junction_1	185637.3181639515	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	172	2025	20.0	-13	True	AATAAA	-6
PB.3367.2	chr14	+	2582	11	novel_in_catalog	SCFD1	novel	2359	25	NA	NA	0	1423	combination_of_known_junctions	FALSE	canonical	1	30255	junction_10	176733.23994373553	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	29	898	20.0	-8	True	NA	NA
PB.3367.3	chr14	+	2064	24	full-splice_match	SCFD1	ENST00000544052.6	2058	24	-4	-2	4	0	multi-exon	FALSE	canonical	1	70062	junction_1	177374.3297870642	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	155	1882	50.0	-4	True	ATTAAA	-14
PB.3367.4	chr14	+	4260	24	novel_in_catalog	SCFD1	novel	2359	25	NA	NA	4	0	intron_retention	FALSE	canonical	1	243212	junction_1	164463.87776637953	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	25	1581	30.0	-4	True	AATAAA	-15
PB.3367.5	chr14	+	2228	26	novel_in_catalog	SCFD1	novel	2359	25	NA	NA	4	12	combination_of_known_junctions	FALSE	canonical	1	6744	junction_19	218846.23950427296	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	25	1623	55.0	-4	True	AATAAA	-27
PB.3367.6	chr14	+	2131	25	full-splice_match	SCFD1	ENST00000458591.6	2359	25	207	21	0	0	multi-exon	FALSE	canonical	1	243212	junction_1	161213.2286457078	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	21	1949	50.0	0	True	ATTAAA	-14
PB.3367.7	chr14	+	1496	17	incomplete-splice_match	SCFD1	ENST00000458591.6	2359	25	208	33450	0	-3523	3prime_fragment	FALSE	canonical	1	243212	junction_1	126875.66004631267	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1476	20	1495	40.0	1	True	AATATA	-1
PB.534.9	chr1	+	1941	12	full-splice_match	CDC7	ENST00000234626.10	3173	12	-39	1271	-39	-1271	multi-exon	FALSE	canonical	1	81588	junction_1	33331.668466246956	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	159	1883	30.0	-14	True	AATAAA	-15
PB.7054.2	chr2	-	2541	19	novel_not_in_catalog	SP110	novel	2725	3	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	8416	junction_3	165418.3462487825	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	130	2349	85.0	7447	False	TTTAAA	-17
PB.485.1	chr1	+	4541	17	novel_not_in_catalog	MIGA1	novel	5288	16	NA	NA	-85	15	any annotated donor/acceptor	TRUE	canonical	1	86	junction_16	37625.235687800014	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	118	2019	95.0	-266	False	NA	NA
PB.471.6	chr1	-	2333	15	full-splice_match	LRRC40	ENST00000370952.3	2884	15	53	498	53	-498	multi-exon	FALSE	canonical	1	154335	junction_5	38549.73105599825	NA	1	NA	TRUE	NA	NA	NA	C	coding	602	1809	28	1836	20.0	-8	True	ATTAAA	-14
PB.6700.5	chr2	+	4718	16	novel_in_catalog	PSD4	novel	910	2	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	32636	junction_14	95764.967531881	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	202	3096	35.0	-8	True	AATAAA	-10
PB.5225.1	chr17	+	3980	6	incomplete-splice_match	TTYH2	ENST00000269346.8	3490	14	30	14839	30	-2833	3prime_fragment	FALSE	canonical	1	56217	junction_1	28283.200417208798	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	45	992	100.0	-27	True	NA	NA
PB.8713.1	chr4	-	4931	6	novel_in_catalog	LCORL	novel	10430	8	NA	NA	2	237	intron_retention	FALSE	canonical	1	32034	junction_1	35122.62253534038	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	12	686	35.0	13	True	AATAAA	-31
PB.5225.3	chr17	+	3443	14	full-splice_match	TTYH2	ENST00000269346.8	3490	14	43	4	43	0	multi-exon	FALSE	canonical	1	56217	junction_1	37976.02665416525	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	32	1636	20.0	-14	True	AATAAA	-12
PB.5225.2	chr17	+	4474	5	incomplete-splice_match	TTYH2	ENST00000269346.8	3490	14	43	14839	43	-2833	intron_retention	FALSE	canonical	1	56217	junction_1	31567.84088673155	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	32	766	100.0	-14	True	NA	NA
PB.5225.5	chr17	+	3340	13	novel_in_catalog	TTYH2	novel	3490	14	NA	NA	54	1	no_combination_of_known_junctions	FALSE	canonical	1	1689	junction_8	51206.089322882835	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	21	1532	15.0	-3	True	AATAAA	-13
PB.5225.4	chr17	+	3369	13	novel_in_catalog	TTYH2	novel	3490	14	NA	NA	43	-1	no_combination_of_known_junctions	FALSE	canonical	1	835	junction_5	51252.28549775177	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	32	805	20.0	-14	True	AATAAA	-11
PB.8713.6	chr4	-	4903	8	novel_not_in_catalog	LCORL	novel	10430	8	NA	NA	2	-42	any annotated donor/acceptor	FALSE	canonical	1	4287	junction_7	43839.914271665024	NA	3	NA	TRUE	NA	NA	NA	C	coding	439	1320	535	1854	25.0	1	True	AGTAAA	-25
PB.8713.7	chr4	-	4366	7	full-splice_match	LCORL	ENST00000382226.5	5009	7	102	541	-1	-541	multi-exon	FALSE	canonical	1	37932	junction_1	30574.2962942549	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	29	1816	85.0	-4	True	NA	NA
PB.8713.8	chr4	-	4283	6	novel_in_catalog	LCORL	novel	10430	8	NA	NA	0	-541	combination_of_known_junctions	FALSE	canonical	1	7456	junction_4	41532.04676198851	NA	2	NA	TRUE	NA	NA	NA	C	coding	515	1548	186	1733	85.0	-1	True	NA	NA
PB.8713.9	chr4	-	4409	8	novel_not_in_catalog	LCORL	novel	10430	8	NA	NA	0	-542	any annotated donor/acceptor	FALSE	canonical	1	7876	junction_3	39749.01439928147	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	541	1860	80.0	-1	True	NA	NA
PB.10373.2	chr7	+	3912	6	incomplete-splice_match	TTYH3	ENST00000403167.5	4263	10	5002	7	-120	-7	5prime_fragment	FALSE	canonical	1	600839	junction_1	155226.32061915274	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	187	858	35.0	-9782	False	AATAAA	-5
PB.6768.5	chr2	-	5282	9	full-splice_match	ZEB2	ENST00000539609.7	4061	9	-27	-1194	-27	-1	multi-exon	FALSE	canonical	1	38912	junction_6	92868.88254651017	NA	0	NA	TRUE	NA	NA	NA	C	coding	1185	3558	293	3850	40.0	-28	True	AATAAA	-14
PB.6768.7	chr2	-	5636	10	full-splice_match	ZEB2	ENST00000627532.2	9541	10	-33	3938	-28	-1	multi-exon	FALSE	canonical	1	156997	junction_9	48652.80701734142	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	575	4204	40.0	4295	False	AATAAA	-14
PB.11035.2	chr8	+	2670	7	incomplete-splice_match	R3HCC1	ENST00000265806.10	1773	8	204	1	-12	-1	intron_retention	FALSE	canonical	1	250568	junction_1	77420.42076312224	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	626	1279	25.0	4	True	AATAAA	-22
PB.6768.1	chr2	-	8854	10	full-splice_match	ZEB2	ENST00000627532.2	9541	10	273	414	-3	-414	multi-exon	FALSE	canonical	1	156997	junction_9	48652.80701734142	NA	10	NA	TRUE	NA	NA	NA	C	coding	1214	3645	254	3898	10.0	-4	True	AATAAA	-21
PB.8127.9	chr3	+	3811	21	novel_not_in_catalog	RBM6	novel	2260	17	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	12288	junction_2	230033.84600725604	NA	3	NA	TRUE	NA	NA	NA	C	coding	991	2976	723	3698	15.0	5	True	AATAAA	-14
PB.8127.8	chr3	+	3015	17	incomplete-splice_match	RBM6	ENST00000266022.8	3750	21	64	10873	0	-63	3prime_fragment	FALSE	canonical	1	287914	junction_2	167350.3290749561	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2820	196	3015	60.0	-1	True	NA	NA
PB.1694.15	chr10	-	1678	5	full-splice_match	IKZF5	ENST00000368886.9	4555	5	22	2855	12	2333	multi-exon	FALSE	canonical	1	86562	junction_4	42786.06388182956	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	300	1559	40.0	-1	True	AATAAA	-37
PB.1694.14	chr10	-	2855	5	novel_not_in_catalog	IKZF5	novel	4555	5	NA	NA	8	-1641	any annotated donor/acceptor	FALSE	canonical	1	4021	junction_4	80374.7559218689	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	265	1524	10.0	-5	True	AATAAA	-13
PB.8127.5	chr3	+	3627	21	full-splice_match	RBM6	ENST00000266022.8	3750	21	119	4	1	0	multi-exon	FALSE	canonical	1	287914	junction_2	200436.78096232738	NA	0	NA	TRUE	NA	NA	NA	C	coding	1123	3372	141	3512	15.0	0	True	AATAAA	-16
PB.8127.4	chr3	+	3768	20	novel_not_in_catalog	RBM6	novel	2260	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	12288	junction_2	241166.00419525744	NA	5	NA	TRUE	NA	NA	NA	C	coding	465	1398	2256	3653	15.0	-7	True	AATAAA	-16
PB.1694.11	chr10	-	2755	4	novel_in_catalog	IKZF5	novel	4555	5	NA	NA	2	-1640	combination_of_known_junctions	FALSE	canonical	1	10994	junction_3	75915.67748934779	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	164	1423	10.0	-16	True	AATAAA	-14
PB.1694.10	chr10	-	2905	5	full-splice_match	IKZF5	ENST00000368886.9	4555	5	8	1642	-2	-1640	multi-exon	FALSE	canonical	1	86562	junction_4	42786.06388182956	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	314	1573	10.0	-15	True	AATAAA	-14
PB.1694.13	chr10	-	3008	6	novel_not_in_catalog	IKZF5	novel	4555	5	NA	NA	2	-1641	any annotated donor/acceptor	FALSE	canonical	1	9604	junction_3	70762.44605269098	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	418	1677	10.0	-11	True	AATAAA	-13
PB.1694.12	chr10	-	3361	5	novel_not_in_catalog	IKZF5	novel	4555	5	NA	NA	12	-1641	any annotated donor/acceptor	FALSE	canonical	1	4124	junction_2	67401.51101792896	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	975	2030	10.0	-1	True	AATAAA	-13
PB.6916.5	chr2	-	3064	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-12	2235	-12	1646	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	300	1418	0.0	4892	False	NA	NA
PB.6916.4	chr2	-	3597	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-94	1784	-94	-1784	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	382	1500	40.0	4810	False	AATAAA	-34
PB.6916.7	chr2	-	1716	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-3	3574	-3	307	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	291	1409	40.0	-1	True	AATGAA	-27
PB.6916.6	chr2	-	2851	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-18	2454	-18	1427	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	306	1424	35.0	3	True	NA	NA
PB.6916.1	chr2	-	5283	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-3	7	-3	-7	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	3	NA	TRUE	NA	NA	NA	C	coding	372	1119	291	1409	40.0	-1	True	AATAAA	-27
PB.6916.3	chr2	-	5143	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-3	147	-3	-147	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	291	1409	5.0	-1	True	ATTAAA	-16
PB.6916.9	chr2	-	2942	4	novel_not_in_catalog	STK17B	novel	5287	8	NA	NA	-20	3961	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	221778.36113311167	NA	1	1	TRUE	NA	NA	NA	C	coding	111	336	308	643	85.0	1	True	NA	NA
PB.6916.8	chr2	-	1614	8	full-splice_match	STK17B	ENST00000263955.8	5287	8	-10	3683	-10	198	multi-exon	FALSE	canonical	1	348783	junction_5	68629.3173603449	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	298	1416	60.0	-8	True	NA	NA
PB.11300.1	chr8	+	3382	3	novel_in_catalog	ENY2	novel	567	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1620362	junction_2	326434.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	109	330	1665	1994	20.0	-54	True	AATAAA	-14
PB.11209.13	chr8	-	2141	9	full-splice_match	IMPA1	ENST00000256108.9	2690	9	365	184	0	-184	multi-exon	FALSE	canonical	1	195135	junction_8	55277.107326264595	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	102	935	30.0	-4	True	ATTAAA	-21
PB.3546.1	chr14	-	2091	1	full-splice_match	PNMA1	ENST00000316836.4	2590	1	491	8	491	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	353	1062	243	1304	25.0	5230	False	ATTAAA	-8
PB.813.13	chr1	-	4208	22	novel_in_catalog	ARHGEF2	novel	4080	22	NA	NA	-31	-38	intron_retention	FALSE	canonical	1	27634	junction_21	185177.0614402626	NA	1	NA	TRUE	NA	NA	NA	C	coding	969	2910	251	3160	70.0	6	True	NA	NA
PB.813.14	chr1	-	4077	22	full-splice_match	ARHGEF2	ENST00000313695.11	4080	22	-40	43	-31	-38	multi-exon	FALSE	canonical	1	29238	junction_21	181902.66419931088	NA	7	NA	TRUE	NA	NA	NA	C	coding	958	2877	153	3029	70.0	6345	False	NA	NA
PB.11300.3	chr8	+	2904	5	full-splice_match	ENY2	ENST00000521688.5	2922	5	26	-8	1	7	multi-exon	FALSE	canonical	1	1620362	junction_4	270880.835504632	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	120	425	20.0	-30	True	AATAAA	-22
PB.7137.1	chr20	-	1501	1	antisense	novelGene_NOP56_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	28	False	NA	NA
PB.11300.2	chr8	+	2692	5	full-splice_match	ENY2	ENST00000521688.5	2922	5	2	228	0	-228	multi-exon	FALSE	canonical	1	1620362	junction_4	270880.835504632	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	144	449	75.0	-54	True	AATAAA	-37
PB.2910.2	chr12	-	2203	1	novel_in_catalog	MAPKAPK5-AS1	novel	2290	2	NA	NA	-65	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-11	False	NA	NA
PB.2910.1	chr12	-	1331	2	full-splice_match	MAPKAPK5-AS1	ENST00000428207.4	2290	2	954	5	-42	-1	multi-exon	FALSE	canonical	1	260945	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	NA	NA
PB.11062.5	chr8	-	2858	13	incomplete-splice_match	INTS9	ENST00000521022.5	2544	17	-4	8791	-4	1408	3prime_fragment	FALSE	canonical	1	122604	junction_8	29246.044598182656	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	87	1514	95.0	-33	True	AAAAAG	-14
PB.7894.1	chr22	-	2175	1	genic	ODF3B	novel	NA	NA	NA	NA	-15	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	109	330	774	1103	0.0	9217	False	NA	NA
PB.1406.10	chr10	-	3722	18	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-2	-103	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96860.28698046334	NA	1	NA	TRUE	NA	NA	NA	B	coding	894	2685	80	2764	35.0	NA	False	AATAAA	-21
PB.471.5	chr1	-	2391	15	full-splice_match	LRRC40	ENST00000370952.3	2884	15	50	443	50	-443	multi-exon	FALSE	canonical	1	154335	junction_5	38549.73105599825	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	31	1839	80.0	-11	True	TTTAAA	-33
PB.7894.3	chr22	-	1642	5	novel_not_in_catalog	ODF3B	novel	1722	4	NA	NA	52	5	intron_retention	FALSE	canonical	1	8261	junction_4	78668.92041452901	NA	0	NA	TRUE	NA	NA	NA	B	coding	109	330	608	937	0.0	-30	True	NA	NA
PB.1406.11	chr10	-	3655	17	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-6	-111	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96264.64590704822	NA	4	1	TRUE	NA	NA	NA	B	coding	867	2604	102	2705	40.0	NA	False	AATAAA	-13
PB.5231.2	chr17	+	1761	10	full-splice_match	TMEM104	ENST00000582773.5	1740	10	-20	-1	-3	0	multi-exon	FALSE	canonical	1	13859	junction_9	50949.232334080356	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	166	1110	20.0	-3901	False	NA	NA
PB.5231.3	chr17	+	4717	10	full-splice_match	TMEM104	ENST00000335464.9	4745	10	1	27	1	0	multi-exon	FALSE	canonical	1	32557	junction_1	39392.30616080591	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	162	1652	20.0	-15	True	NA	NA
PB.10165.1	chr6	-	2499	10	novel_not_in_catalog	TRAF3IP2	novel	5128	9	NA	NA	-20	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	117254.69479673955	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	334	2031	30.0	291	False	AATAAA	-22
PB.5231.1	chr17	+	3452	10	full-splice_match	TMEM104	ENST00000335464.9	4745	10	-7	1300	-7	571	multi-exon	FALSE	canonical	1	32557	junction_1	39392.30616080591	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	170	1660	40.0	-3905	False	ATTAAA	-28
PB.871.2	chr1	+	2319	14	full-splice_match	USP21	ENST00000368002.7	2342	14	23	0	8	0	multi-exon	FALSE	non_canonical	0	0	junction_11	95925.06704030177	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	355	2052	50.0	-13	True	AATAAA	-7
PB.1406.12	chr10	-	4188	18	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-16	-113	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96974.57000692336	NA	0	NA	TRUE	NA	NA	NA	B	coding	867	2604	637	3240	40.0	NA	False	AATAAA	-11
PB.12318.1	chrX	+	2612	2	novel_in_catalog	CSAG3	novel	789	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	531	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	105	318	1765	2082	10.0	NA	False	AATAAA	-17
PB.10165.4	chr6	-	2584	11	novel_not_in_catalog	TRAF3IP2	novel	5128	9	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	123239.7211689478	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	227	2122	30.0	-1	True	AATAAA	-16
PB.113.3	chr1	+	4749	11	incomplete-splice_match	SPEN	ENST00000375759.7	12232	15	-60	9735	-60	-8819	3prime_fragment	FALSE	canonical	1	124614	junction_2	45209.70877466477	NA	0	NA	TRUE	NA	NA	NA	B	coding	1495	4485	265	4749	65.0	-55	True	AAGAAA	-42
PB.4640.6	chr17	-	3359	8	novel_in_catalog	GLOD4	novel	276	2	NA	NA	1	0	intron_retention	FALSE	canonical	1	598540	junction_7	115081.96558566952	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	1910	2638	60.0	-11	True	ATTAAA	-17
PB.11838.1	chr9	+	3608	16	novel_in_catalog	MIGA2	novel	569	3	NA	NA	6	-1	combination_of_known_junctions	TRUE	canonical	1	88559	junction_1	44539.484391367725	NA	0	NA	TRUE	NA	NA	NA	B	coding	593	1782	199	1980	10.0	1	True	AATAAA	-22
PB.1406.14	chr10	-	3929	18	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-6	-330	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96860.28698046334	NA	1	NA	TRUE	NA	NA	NA	B	coding	976	2931	268	3198	60.0	NA	False	AATAAA	-24
PB.4175.10	chr16	-	2366	1	full-splice_match	RNPS1	ENST00000566783.1	1826	1	-540	0	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	978	False	NA	NA
PB.4175.11	chr16	-	2263	1	full-splice_match	RNPS1	ENST00000566783.1	1826	1	-784	347	2	-347	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	150	453	2	454	70.0	13	True	NA	NA
PB.612.5	chr1	-	2037	10	full-splice_match	WDR77	ENST00000235090.9	2576	10	156	383	156	-383	multi-exon	FALSE	canonical	1	372963	junction_9	205839.4075233301	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	52	1080	15.0	-1	True	AATAAA	-18
PB.11625.31	chr9	-	2672	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	221	1609	85.0	-17	True	NA	NA
PB.7092.1	chr2	+	1799	8	full-splice_match	SCLY	ENST00000409736.6	1774	8	-29	4	1	-4	multi-exon	FALSE	canonical	1	111771	junction_1	47259.1272722065	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	30	1007	30.0	1	True	NA	NA
PB.2966.1	chr12	+	1754	12	full-splice_match	P2RX4	ENST00000337233.8	2032	12	276	2	4	0	multi-exon	FALSE	canonical	1	137637	junction_1	64400.503327302635	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	33	1199	15.0	4	True	ATTAAA	-14
PB.2966.2	chr12	+	2579	11	novel_in_catalog	P2RX4	novel	2032	12	NA	NA	24	1	intron_retention	FALSE	canonical	1	137637	junction_1	65958.1126670556	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	77	541	10.0	-40	True	ATTAAA	-15
PB.2966.3	chr12	+	1620	11	full-splice_match	P2RX4	ENST00000543984.5	1612	11	-10	2	2	0	multi-exon	FALSE	canonical	1	20556	junction_1	95456.08579572076	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	202	1065	15.0	-10	True	ATTAAA	-14
PB.2966.4	chr12	+	1798	13	full-splice_match	P2RX4	ENST00000359949.11	1836	13	73	-35	9	1	multi-exon	FALSE	canonical	1	5828	junction_1	116069.90669024996	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	28	1242	10.0	9	True	ATTAAA	-15
PB.2966.5	chr12	+	1678	12	novel_not_in_catalog	P2RX4	novel	2032	12	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	14721	junction_7	100425.48755698351	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	28	810	15.0	9	True	ATTAAA	-14
PB.8397.38	chr3	+	3846	27	full-splice_match	ATP2C1	ENST00000504948.5	4714	27	-92	960	71	848	multi-exon	FALSE	canonical	1	53219	junction_1	228071.19362707945	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	295	3006	45.0	2	True	AATAAA	-30
PB.8626.14	chr3	+	1926	6	full-splice_match	PIGX	ENST00000392391.7	3057	6	17	1114	17	604	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	282	935	50.0	-2	True	AATAAA	-11
PB.8397.39	chr3	+	3622	28	full-splice_match	ATP2C1	ENST00000359644.7	3401	28	-516	295	-53	-295	multi-exon	FALSE	canonical	1	205333	junction_27	224825.66135906693	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	646	3495	35.0	2	True	AATAAA	-27
PB.6494.2	chr2	+	2577	2	full-splice_match	B3GNT2	ENST00000301998.4	2763	2	7	179	7	3	multi-exon	FALSE	canonical	1	186467	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	246	1439	20.0	5	True	AATAAA	-19
PB.8485.17	chr3	-	2027	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	50	1639	-9	1042	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	46	603	25.0	16	False	NA	NA
PB.11625.37	chr9	-	2687	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	15	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	682443.6565453103	NA	3	1	TRUE	NA	NA	NA	B	coding	458	1377	191	1567	85.0	363	False	NA	NA
PB.2929.11	chr12	-	5143	1	novel_in_catalog	RBM19	novel	4194	24	NA	NA	22	-3344	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-25	False	NA	NA
PB.2929.10	chr12	-	3526	24	full-splice_match	RBM19	ENST00000261741.9	4194	24	43	625	-18	5	multi-exon	FALSE	canonical	1	150465	junction_4	33828.18281916546	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	102	2984	10.0	-4	True	NA	NA
PB.7560.11	chr21	-	3076	7	novel_in_catalog	PTTG1IP	novel	2413	4	NA	NA	233	-9	combination_of_known_junctions	FALSE	canonical	1	2129	junction_6	957714.0429653311	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2132	False	AATAAA	-19
PB.7560.10	chr21	-	2616	6	novel_not_in_catalog	PTTG1IP	novel	2413	4	NA	NA	3	-4	any annotated donor/acceptor	FALSE	canonical	1	3697	junction_2	785610.7108066692	NA	3	1	TRUE	NA	NA	NA	C	coding	155	468	91	558	10.0	-17	True	AATAAA	-24
PB.7560.12	chr21	-	2407	4	full-splice_match	PTTG1IP	ENST00000397887.7	2413	4	-5	11	-5	-10	multi-exon	FALSE	canonical	1	9605	junction_1	551631.3350504625	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	99	422	10.0	1853	False	AATAAA	-18
PB.7560.15	chr21	-	2252	4	novel_not_in_catalog	PTTG1IP	novel	2413	4	NA	NA	-9	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	555808.0978865117	NA	5	1	TRUE	NA	NA	NA	C	coding	140	423	62	484	10.0	12	True	AATAAA	-15
PB.7560.14	chr21	-	2548	5	novel_in_catalog	PTTG1IP	novel	2413	4	NA	NA	-16	-11	no_combination_of_known_junctions	FALSE	canonical	1	1758	junction_1	651238.2789636217	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	69	527	10.0	5	True	AATAAA	-17
PB.7560.17	chr21	-	2189	6	full-splice_match	PTTG1IP	ENST00000330938.7	2760	6	126	445	-2	-444	multi-exon	FALSE	canonical	1	826514	junction_5	565087.6660594885	NA	7	1	TRUE	NA	NA	NA	C	coding	180	543	96	638	45.0	-22	True	NA	NA
PB.7560.16	chr21	-	2340	6	full-splice_match	PTTG1IP	ENST00000330938.7	2760	6	148	272	20	-271	multi-exon	FALSE	canonical	1	826514	junction_5	565087.6660594885	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	74	616	25.0	0	True	CATAAA	-33
PB.11625.39	chr9	-	2600	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-5	-156	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	790309.6513899389	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	227	1546	55.0	-23	True	AATATA	-33
PB.6494.1	chr2	+	2604	2	full-splice_match	B3GNT2	ENST00000301998.4	2763	2	157	2	157	-2	multi-exon	FALSE	canonical	1	186467	junction_1	0.0	NA	4	1	TRUE	NA	NA	NA	C	coding	397	1194	96	1289	25.0	155	False	AATAAA	-15
PB.177.35	chr1	+	3214	13	novel_in_catalog	SRRM1	novel	4011	17	NA	NA	-113	0	intron_retention	FALSE	canonical	1	132978	junction_12	169150.77036347057	NA	3	NA	TRUE	NA	NA	NA	C	coding	587	1764	475	2238	35.0	-4379	False	AATAAA	-12
PB.11443.1	chr9	-	4296	1	novel_in_catalog	ERMP1	novel	3554	16	NA	NA	49914	5939	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	121	366	3895	4260	25.0	NA	False	NA	NA
PB.11625.38	chr9	-	2697	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-8	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	811826.2383334457	NA	3	1	TRUE	NA	NA	NA	B	coding	222	669	909	1577	85.0	-26	True	NA	NA
PB.850.5	chr1	-	3530	8	novel_not_in_catalog	AL139011.2	novel	2587	16	NA	NA	-2	-36735	intron_retention	FALSE	canonical	1	9727	junction_1	237140.8734076237	NA	1	NA	TRUE	NA	NA	NA	B	coding	279	840	9	848	25.0	0	True	ATTAAA	-11
PB.7977.2	chr3	-	3881	4	full-splice_match	NKIRAS1	ENST00000416026.2	795	4	22	-3108	-6	1703	multi-exon	FALSE	canonical	1	4007	junction_3	92818.13169610534	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	165	743	35.0	30	True	AATAAA	-19
PB.2562.30	chr12	-	4130	3	full-splice_match	SCAF11	ENST00000474828.1	757	3	-48	-3325	-40	2373	multi-exon	FALSE	canonical	1	391413	junction_1	4860.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	1434	False	NA	NA
PB.2562.31	chr12	-	1912	2	incomplete-splice_match	SCAF11	ENST00000266589.10	2084	6	-61	25567	-42	-12690	3prime_fragment	FALSE	canonical	1	13558	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	309	644	30.0	1432	False	NA	NA
PB.996.10	chr1	+	3325	16	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-162	212600	-162	204	3prime_fragment	FALSE	canonical	1	26732	junction_1	3520.200219053204	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	392	3040	30.0	-2	True	GATAAA	-21
PB.35.1	chr1	+	2939	7	novel_not_in_catalog	RER1	novel	3000	6	NA	NA	-1776	0	intron_retention	FALSE	canonical	1	130	junction_1	658035.1690562511	NA	3	NA	TRUE	NA	NA	NA	C	coding	196	591	31	621	30.0	-1843	False	AATAAA	-22
PB.2107.1	chr11	-	936	2	full-splice_match	PTPRCAP	ENST00000326294.3	1292	2	356	0	356	0	multi-exon	FALSE	canonical	1	773916	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	206	621	93	713	20.0	6095	False	AATAAA	-17
PB.8397.37	chr3	+	3207	28	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	-77	-296	combination_of_known_junctions	FALSE	canonical	1	53219	junction_1	247170.108861712	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	280	3081	40.0	17	True	AATAAA	-26
PB.8505.15	chr3	+	2968	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	1	9221	junction_3	144801.1854326246	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	434	1585	15.0	0	True	AATAAA	-18
PB.6830.1	chr2	+	5506	14	novel_in_catalog	DCAF17	novel	2429	13	NA	NA	-79	2	combination_of_known_junctions	FALSE	canonical	1	29844	junction_1	27939.842993845006	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	269	1570	25.0	-190	False	NA	NA
PB.11081.1	chr8	+	3471	10	full-splice_match	MAK16	ENST00000360128.10	3991	10	432	88	0	-88	multi-exon	FALSE	canonical	1	149720	junction_1	56697.493780480756	NA	12	NA	TRUE	NA	NA	NA	C	coding	300	903	26	928	60.0	0	True	NA	NA
PB.6830.2	chr2	+	5377	13	novel_not_in_catalog	DCAF17	novel	2429	13	NA	NA	-59	-1	any annotated donor/acceptor	FALSE	canonical	1	5998	junction_5	32766.665695574753	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	718	1440	20.0	-170	False	NA	NA
PB.572.1	chr1	-	1772	8	full-splice_match	DPH5	ENST00000370109.7	1316	8	-20	-436	-5	-4	multi-exon	FALSE	canonical	1	314514	junction_4	58258.18643008422	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	134	991	40.0	-9	True	AATAAA	-19
PB.572.2	chr1	-	1312	8	novel_not_in_catalog	DPH5	novel	2159	9	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	1118	junction_7	146622.84798149325	NA	3	NA	TRUE	NA	NA	NA	C	coding	285	858	112	969	15.0	-1	True	NA	NA
PB.3444.9	chr14	-	5738	13	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	-34	-1	intron_retention	FALSE	canonical	1	7308	junction_11	106039.75119301435	NA	3	NA	TRUE	NA	NA	NA	C	coding	906	2721	219	2939	20.0	-3	True	ATTAAA	-12
PB.8346.8	chr3	-	3018	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-22	-2	any annotated donor/acceptor	FALSE	canonical	1	41451	junction_10	133328.77333854084	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	121	2580	40.0	-1	True	AATAAA	-17
PB.8346.9	chr3	-	3256	12	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	canonical	1	15314	junction_2	174436.71093409244	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	113	2419	40.0	7	True	AATAAA	-17
PB.8860.5	chr4	-	2025	2	full-splice_match	HELQ	ENST00000515482.1	574	2	0	-1451	0	1451	multi-exon	FALSE	canonical	1	22387	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	163	1113	75.0	-33	True	NA	NA
PB.8346.7	chr3	-	3239	11	novel_in_catalog	PARP9	novel	3128	11	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	25956	junction_10	153108.53872256767	NA	1	NA	TRUE	NA	NA	NA	C	coding	854	2565	237	2801	40.0	17	True	AATAAA	-17
PB.8346.4	chr3	-	3347	11	full-splice_match	PARP9	ENST00000471785.5	3040	11	-228	-79	107	-2	multi-exon	FALSE	canonical	1	25956	junction_10	136281.14672033692	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	450	2909	40.0	309	False	AATAAA	-17
PB.8346.5	chr3	-	3165	12	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-28	-2	any annotated donor/acceptor	FALSE	canonical	1	15314	junction_2	164698.2609612284	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	127	2328	40.0	-7	True	AATAAA	-17
PB.8346.3	chr3	-	3897	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-22	-2	any annotated donor/acceptor	FALSE	canonical	1	13068	junction_5	154371.98855738045	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	121	1461	40.0	-1	True	AATAAA	-17
PB.8346.1	chr3	-	3237	11	full-splice_match	PARP9	ENST00000360356.6	3198	11	-9	-30	-9	-5	multi-exon	FALSE	canonical	1	14307	junction_10	155046.55289070442	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	238	2802	40.0	193	False	AATAAA	-14
PB.9154.2	chr5	-	3694	4	incomplete-splice_match	ZNF622	ENST00000308683.2	1699	6	-2	4595	-2	-4595	3prime_fragment	FALSE	canonical	1	408997	junction_1	38888.09951929024	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	181	1314	90.0	5	True	NA	NA
PB.3763.1	chr15	-	3760	13	full-splice_match	MEIS2	ENST00000424352.6	2917	13	-19	-824	-19	-4	multi-exon	FALSE	canonical	1	89839	junction_3	48091.188024173294	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	1276	2289	5.0	-3	True	AATAAA	-20
PB.1713.15	chr10	-	4129	3	novel_in_catalog	MKI67	novel	11417	14	NA	NA	15	-6296	intron_retention	FALSE	canonical	1	162786	junction_2	45749.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.1713.14	chr10	-	2399	10	incomplete-splice_match	MKI67	ENST00000368654.7	12678	15	-17	15350	-17	-489	3prime_fragment	FALSE	canonical	1	144615	junction_3	88166.16436655907	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2004	394	2397	70.0	90	False	AGTAAA	-10
PB.1713.13	chr10	-	2114	12	incomplete-splice_match	MKI67	ENST00000368653.7	11417	14	-248	12430	-67	2431	3prime_fragment	FALSE	canonical	1	90457	junction_6	98861.5226882097	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1671	444	2114	50.0	40	False	AAAAAG	-32
PB.1713.12	chr10	-	3127	13	incomplete-splice_match	MKI67	ENST00000368654.7	12678	15	0	12430	0	2431	3prime_fragment	FALSE	canonical	1	144615	junction_6	89588.82542246209	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2751	377	3127	50.0	-15	True	AAAAAG	-32
PB.1713.11	chr10	-	2754	10	novel_in_catalog	MKI67	novel	11417	14	NA	NA	-35	2493	combination_of_known_junctions	FALSE	canonical	1	11008	junction_9	123527.03124367776	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1779	974	2752	70.0	2	True	AATAGA	-37
PB.1713.10	chr10	-	8660	13	incomplete-splice_match	MKI67	ENST00000368653.7	11417	14	-210	4969	-29	-144	3prime_fragment	FALSE	canonical	1	90457	junction_7	170082.1185900603	NA	3	NA	TRUE	NA	NA	NA	C	coding	2751	8253	406	8658	70.0	8	True	NA	NA
PB.9258.11	chr5	+	4495	8	incomplete-splice_match	ERBIN	ENST00000380943.6	6410	25	119795	7	-8282	-7	5prime_fragment	FALSE	canonical	1	244303	junction_4	165191.22928624885	NA	2	NA	TRUE	NA	NA	NA	C	coding	819	2460	57	2516	25.0	-7705	False	AAAAAG	-20
PB.9258.10	chr5	+	5746	20	incomplete-splice_match	ERBIN	ENST00000284037.9	8647	26	88190	2040	-8207	-7	5prime_fragment	FALSE	canonical	1	21191	junction_15	164162.6544332162	NA	3	1	TRUE	NA	NA	NA	C	coding	1238	3717	51	3767	25.0	-2872	False	AAAAAG	-20
PB.6830.7	chr2	+	5440	14	full-splice_match	DCAF17	ENST00000375255.7	5828	14	386	2	-20	2	multi-exon	FALSE	canonical	1	35443	junction_8	25715.235683086525	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	203	1504	25.0	309	False	NA	NA
PB.6830.8	chr2	+	5369	13	novel_in_catalog	DCAF17	novel	2429	13	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	1	43443	junction_8	23402.812325510273	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	873	1433	25.0	274	False	NA	NA
PB.998.14	chr1	-	7567	52	novel_in_catalog	TPR	novel	9708	51	NA	NA	-41	-2178	combination_of_known_junctions	FALSE	canonical	1	28601	junction_51	226417.57962307642	NA	1	NA	TRUE	NA	NA	NA	B	coding	2363	7092	335	7426	35.0	-1	True	AATAAA	-16
PB.4261.10	chr16	-	2908	23	novel_not_in_catalog	PARN	novel	3078	24	NA	NA	1	-13752	any annotated donor/acceptor	FALSE	canonical	1	6612	junction_1	112036.5432848081	NA	2	NA	TRUE	NA	NA	NA	C	coding	585	1758	113	1870	20.0	22	True	NA	NA
PB.4261.11	chr16	-	2024	21	incomplete-splice_match	PARN	ENST00000437198.6	3078	24	7	115911	0	4042	3prime_fragment	FALSE	canonical	1	179529	junction_20	82172.65958472744	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	136	1689	20.0	-1	True	ATTAAA	-9
PB.4261.12	chr16	-	1944	20	novel_in_catalog	PARN	novel	3078	24	NA	NA	3	4042	combination_of_known_junctions	FALSE	canonical	1	6213	junction_17	119428.15302328851	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	257	1609	20.0	11	True	ATTAAA	-9
PB.6830.9	chr2	+	5614	12	full-splice_match	DCAF17	ENST00000539783.5	5623	12	12	-3	12	-1	multi-exon	FALSE	canonical	1	7223	junction_9	32828.4694318768	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	316	1677	20.0	0	True	NA	NA
PB.7560.1	chr21	-	2533	6	full-splice_match	PTTG1IP	ENST00000330938.7	2760	6	151	76	-18	-75	multi-exon	FALSE	canonical	1	826514	junction_5	565087.6660594885	NA	4	NA	TRUE	NA	NA	NA	C	coding	180	543	71	613	40.0	3	True	AATACA	-33
PB.7560.2	chr21	-	2502	5	novel_in_catalog	PTTG1IP	novel	2413	4	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	15289	junction_3	980270.3536328638	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-28
PB.7560.5	chr21	-	2589	5	novel_in_catalog	PTTG1IP	novel	2413	4	NA	NA	-12	-1	no_combination_of_known_junctions	FALSE	canonical	1	2034	junction_4	940759.8603360477	NA	6	1	TRUE	NA	NA	NA	C	coding	79	240	356	595	5.0	1846	False	AATAAA	-27
PB.7560.4	chr21	-	2813	6	novel_in_catalog	PTTG1IP	novel	2413	4	NA	NA	-225	-14	no_combination_of_known_junctions	FALSE	canonical	1	4010	junction_5	845886.9355503725	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2310	False	AATAAA	-14
PB.7560.7	chr21	-	1917	2	novel_not_in_catalog	PTTG1IP	novel	2413	4	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	3	True	AATAAA	-27
PB.5527.4	chr18	-	4103	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	203	3426	203	923	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	88	1221	70.0	-12	True	NA	NA
PB.4066.9	chr15	+	3908	37	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	143724.36259738533	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	80	3886	10.0	-2	True	AATAAA	-22
PB.4066.8	chr15	+	4171	39	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	140284.98237513658	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	163	4149	10.0	-2	True	AATAAA	-22
PB.12320.2	chrX	+	2125	4	intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1463	junction_1	4455.650669530646	NA	0	NA	FALSE	NA	NA	NA	A	coding	92	279	24	302	20.0	NA	False	NA	NA
PB.12320.1	chrX	+	3339	4	intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1463	junction_1	4455.650669530646	NA	1	NA	FALSE	NA	NA	NA	A	coding	92	279	54	332	30.0	NA	False	NA	NA
PB.4066.3	chr15	+	4557	37	full-splice_match	FANCI	ENST00000300027.12	4713	37	26	130	0	2	multi-exon	FALSE	canonical	1	16904	junction_23	137544.81456245756	NA	4	NA	TRUE	NA	NA	NA	C	coding	1268	3807	79	3885	15.0	-4	True	AATAAA	-16
PB.4066.2	chr15	+	4083	38	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	128317.47296335746	NA	4	2	TRUE	NA	NA	NA	C	coding	1322	3966	117	4082	75.0	-8	True	NA	NA
PB.4066.1	chr15	+	4658	38	full-splice_match	FANCI	ENST00000310775.11	4743	38	-2	87	-2	-86	multi-exon	TRUE	canonical	1	88511	junction_1	121361.49651354545	NA	1	NA	TRUE	NA	NA	NA	C	coding	1328	3987	89	4075	25.0	-14	True	AATAGA	-19
PB.4066.7	chr15	+	4513	38	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	2	3	any annotated donor/acceptor	FALSE	canonical	1	2338	junction_37	135316.30958432474	NA	1	NA	TRUE	NA	NA	NA	C	coding	1317	3954	77	4030	15.0	-2	True	AATAAA	-17
PB.4066.6	chr15	+	2980	24	incomplete-splice_match	FANCI	ENST00000310775.11	4743	38	9	21768	1	4769	3prime_fragment	FALSE	canonical	1	88511	junction_1	80912.73398464276	NA	1	NA	TRUE	NA	NA	NA	C	coding	879	2640	78	2717	95.0	-3	True	NA	NA
PB.4066.5	chr15	+	4041	39	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	1	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	150128.29239106903	NA	0	NA	TRUE	NA	NA	NA	C	coding	1314	3945	75	4019	10.0	-3	True	AATAAA	-22
PB.4066.4	chr15	+	4215	39	novel_in_catalog	FANCI	novel	4713	37	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	142272.38151717247	NA	4	2	TRUE	NA	NA	NA	C	coding	1328	3987	207	4193	10.0	-4	True	AATAAA	-22
PB.3773.4	chr15	+	3656	23	novel_not_in_catalog	BUB1B	novel	583	4	NA	NA	-8	-15	any annotated donor/acceptor	TRUE	canonical	1	4964	junction_12	101011.48347527637	NA	1	NA	TRUE	NA	NA	NA	C	coding	1035	3108	187	3294	25.0	-34	True	AATAAA	-14
PB.3773.3	chr15	+	3852	22	novel_in_catalog	BUB1B	novel	583	4	NA	NA	1	-2	intron_retention	FALSE	canonical	1	201742	junction_4	74397.22057946865	NA	1	NA	TRUE	NA	NA	NA	C	coding	698	2097	1381	3477	25.0	-1	True	AATAAA	-27
PB.3773.2	chr15	+	2972	19	incomplete-splice_match	BUB1B	ENST00000287598.10	3725	23	-5	8251	-2	6611	3prime_fragment	FALSE	canonical	1	201742	junction_4	80887.05931304293	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2562	201	2762	35.0	-48	True	NA	NA
PB.3773.1	chr15	+	3522	23	full-splice_match	BUB1B	ENST00000287598.10	3725	23	186	17	145	-17	multi-exon	FALSE	canonical	1	201742	junction_4	77092.22841195253	NA	0	NA	TRUE	NA	NA	NA	C	coding	1050	3153	10	3162	30.0	93	False	AATAAA	-12
PB.4765.3	chr17	+	5479	27	incomplete-splice_match	PFAS	ENST00000314666.10	5371	28	-7	-4	-7	-2	intron_retention	FALSE	canonical	1	132915	junction_17	54080.28854935373	NA	2	NA	TRUE	NA	NA	NA	C	coding	1281	3846	141	3986	20.0	-10	True	NA	NA
PB.4765.2	chr17	+	5373	28	full-splice_match	PFAS	ENST00000314666.10	5371	28	3	-5	3	-1	multi-exon	FALSE	canonical	1	132915	junction_17	53079.962232887076	NA	0	NA	TRUE	NA	NA	NA	C	coding	1338	4017	131	4147	20.0	0	True	NA	NA
PB.4765.1	chr17	+	5533	27	novel_not_in_catalog	PFAS	novel	581	3	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	1975	junction_2	73692.95155006186	NA	4	NA	TRUE	NA	NA	NA	C	coding	932	2799	348	3146	10.0	-26	False	NA	NA
PB.11440.13	chr9	+	5377	3	incomplete-splice_match	CD274	ENST00000381577.3	3644	7	17	8213	17	-904	3prime_fragment	FALSE	canonical	1	70419	junction_1	11091.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	137	414	70	483	70.0	0	True	TATAAA	-12
PB.4765.7	chr17	+	5611	28	novel_in_catalog	PFAS	novel	581	3	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	1	33579	junction_22	68594.15590231151	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	118	2961	20.0	13	True	NA	NA
PB.4765.6	chr17	+	5516	27	novel_not_in_catalog	PFAS	novel	581	3	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_23	74033.66908721188	NA	30	2	TRUE	NA	NA	NA	C	coding	992	2979	131	3109	15.0	0	True	NA	NA
PB.4765.5	chr17	+	4296	28	full-splice_match	PFAS	ENST00000314666.10	5371	28	3	1072	3	-17	multi-exon	FALSE	canonical	1	132915	junction_17	53079.962232887076	NA	0	NA	TRUE	NA	NA	NA	C	coding	1338	4017	131	4147	15.0	0	True	NA	NA
PB.4765.4	chr17	+	5380	28	novel_in_catalog	PFAS	novel	581	3	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	1268	junction_1	71635.13759598053	NA	1	NA	TRUE	NA	NA	NA	C	coding	1369	4110	57	4166	20.0	-2	True	NA	NA
PB.9685.8	chr5	-	1690	8	novel_in_catalog	RACK1	novel	1150	8	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	1	7294	junction_7	10267590.734709324	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	758	1669	65.0	-1	True	NA	NA
PB.8430.41	chr3	-	2577	19	incomplete-splice_match	COPB2	ENST00000333188.9	3360	22	89	1592	-3	-1166	3prime_fragment	FALSE	canonical	1	930352	junction_18	191059.30280419398	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2484	94	2577	25.0	-1	True	NA	NA
PB.7001.9	chr2	+	3754	11	novel_in_catalog	ARPC2	novel	1505	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	21026	junction_5	2397003.9596172054	NA	5	NA	TRUE	NA	NA	NA	C	coding	186	561	2762	3322	25.0	-9	True	AATAAA	-18
PB.7001.8	chr2	+	1820	11	novel_in_catalog	ARPC2	novel	1505	11	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	18301	junction_5	2397521.9524683836	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	1074	1634	85.0	-10	True	NA	NA
PB.7001.7	chr2	+	1421	11	full-splice_match	ARPC2	ENST00000315717.9	1505	11	83	1	-4	-1	multi-exon	FALSE	canonical	1	1847506	junction_1	1857704.7692289643	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	87	989	25.0	-12	True	AATAAA	-18
PB.8334.7	chr3	-	4314	13	novel_not_in_catalog	GOLGB1	novel	11187	22	NA	NA	0	725	any annotated donor/acceptor	FALSE	canonical	1	29168	junction_7	63391.79436399872	NA	0	NA	TRUE	NA	NA	NA	C	coding	1401	4203	112	4314	55.0	0	True	NA	NA
PB.7001.5	chr2	+	2054	5	full-splice_match	ARPC2	ENST00000489598.5	1039	5	25	-1040	-9	702	multi-exon	FALSE	canonical	1	1847506	junction_1	819908.9370907296	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-17	True	NA	NA
PB.7001.4	chr2	+	3435	10	novel_in_catalog	ARPC2	novel	1505	11	NA	NA	-15	0	intron_retention	FALSE	canonical	1	13444	junction_6	2603242.0853321906	NA	11	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-23	True	NA	NA
PB.7001.3	chr2	+	1149	11	novel_not_in_catalog	ARPC2	novel	1505	11	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	51	junction_1	2222723.4197254255	NA	1	1	TRUE	NA	NA	NA	C	coding	300	903	54	956	90.0	-36	True	NA	NA
PB.7001.2	chr2	+	3545	11	novel_in_catalog	ARPC2	novel	1505	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	21026	junction_5	2397003.9596172054	NA	5	NA	TRUE	NA	NA	NA	C	coding	186	561	2792	3352	90.0	-39	True	NA	NA
PB.7001.1	chr2	+	982	10	incomplete-splice_match	ARPC2	ENST00000315717.9	1505	11	43	4449	-4	-4209	3prime_fragment	TRUE	canonical	1	1847506	junction_1	1957863.9752028575	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	855	127	981	70.0	-52	True	NA	NA
PB.5505.8	chr18	+	4093	27	novel_in_catalog	RELCH	novel	8585	29	NA	NA	-5	-1149	no_combination_of_known_junctions	FALSE	canonical	1	11362	junction_17	65112.32895203252	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	230	2731	45.0	5	True	AATAAA	-30
PB.5505.9	chr18	+	5355	28	novel_in_catalog	RELCH	novel	8585	29	NA	NA	14	8	no_combination_of_known_junctions	FALSE	canonical	1	18970	junction_22	56361.45104644092	NA	1	NA	TRUE	NA	NA	NA	C	coding	1040	3123	211	3333	15.0	24	True	AATAAA	-21
PB.11140.5	chr8	+	5062	2	incomplete-splice_match	CHCHD7	ENST00000518944.1	582	3	-2656	-1025	0	0	intron_retention	FALSE	canonical	1	587944	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-16
PB.11140.4	chr8	+	1504	4	full-splice_match	CHCHD7	ENST00000355315.7	1535	4	34	-3	0	1	multi-exon	FALSE	canonical	1	454775	junction_1	193914.60447377918	NA	0	NA	TRUE	NA	NA	NA	C	coding	85	258	66	323	25.0	0	True	AATAAA	-17
PB.11140.3	chr8	+	1705	5	novel_in_catalog	CHCHD7	novel	573	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	172171	junction_2	303277.8241600431	NA	0	NA	TRUE	NA	NA	NA	C	coding	81	246	149	394	30.0	-10	False	AATAAA	-16
PB.11140.2	chr8	+	1696	5	full-splice_match	CHCHD7	ENST00000518801.5	1670	5	-30	4	12	0	multi-exon	FALSE	canonical	1	114555	junction_2	314839.27195832797	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-21	False	AATAAA	-16
PB.11140.1	chr8	+	1674	5	full-splice_match	CHCHD7	ENST00000303759.3	1684	5	10	0	10	0	multi-exon	FALSE	canonical	1	172171	junction_2	284914.50299607427	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	162	494	30.0	-23	False	AATAAA	-16
PB.5505.1	chr18	+	4322	29	full-splice_match	RELCH	ENST00000644646.1	8585	29	9	4254	6	-1149	multi-exon	FALSE	canonical	1	78956	junction_22	51927.64174107602	NA	4	2	TRUE	NA	NA	NA	C	coding	1213	3642	252	3893	45.0	-17	True	AATAAA	-30
PB.5505.2	chr18	+	3300	22	incomplete-splice_match	RELCH	ENST00000398130.6	6178	29	-2	32257	-2	0	3prime_fragment	FALSE	canonical	1	89020	junction_1	31255.17503497813	NA	1	NA	TRUE	NA	NA	NA	C	coding	1019	3057	244	3300	25.0	-9	True	AATAAA	-17
PB.12188.1	chrX	+	2115	4	full-splice_match	ARMCX1	ENST00000372829.7	2141	4	16	10	16	-10	multi-exon	FALSE	canonical	1	144087	junction_1	16032.738699992033	NA	0	NA	TRUE	NA	NA	NA	A	coding	453	1362	356	1717	55.0	-3	True	AATAAA	-20
PB.5505.4	chr18	+	5470	29	full-splice_match	RELCH	ENST00000644646.1	8585	29	19	3096	0	9	multi-exon	FALSE	canonical	1	78956	junction_22	51927.64174107602	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3642	242	3883	15.0	-7	True	AATAAA	-22
PB.5505.5	chr18	+	4694	11	novel_in_catalog	RELCH	novel	8585	29	NA	NA	5	2319	combination_of_known_junctions	FALSE	canonical	1	9450	junction_10	54987.692472134164	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	237	1868	75.0	-2	True	AGTAAA	-39
PB.5505.6	chr18	+	2607	1	novel_in_catalog	RELCH	novel	8585	29	NA	NA	5	-37565	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	192	579	237	815	15.0	-2	True	ATTAAA	-12
PB.5505.7	chr18	+	3328	2	incomplete-splice_match	RELCH	ENST00000587725.5	3268	22	-10	61842	7	-13721	3prime_fragment	FALSE	canonical	1	89020	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	235	849	100.0	0	True	NA	NA
PB.5939.1	chr19	-	2458	11	novel_in_catalog	NFKBID	novel	1552	6	NA	NA	-37	-21	intron_retention	FALSE	canonical	1	47405	junction_10	22261.895459281986	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	510	1166	100.0	8873	False	NA	NA
PB.11794.4	chr9	+	1756	3	full-splice_match	ZBTB43	ENST00000373464.4	5965	3	15	4194	-3	920	multi-exon	FALSE	canonical	1	70184	junction_1	8391.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	250	1653	70.0	-10	True	NA	NA
PB.5686.2	chr19	-	3307	5	novel_not_in_catalog	ZNF121	novel	7177	6	NA	NA	-4	14	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	106054.63104692788	NA	3	NA	TRUE	NA	NA	NA	A	coding	343	1032	201	1232	45.0	-1	True	NA	NA
PB.8153.2	chr3	-	1645	4	full-splice_match	ABHD14B	ENST00000361143.9	1636	4	28	-37	-7	0	multi-exon	FALSE	canonical	1	381325	junction_3	154179.6635768371	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	103	735	10.0	10	True	AATAAA	-14
PB.8153.1	chr3	-	1842	4	full-splice_match	ABHD14B	ENST00000395008.6	1818	4	-10	-14	8	0	multi-exon	FALSE	canonical	1	63604	junction_3	272671.2057857717	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	300	932	10.0	7	True	AATAAA	-14
PB.3892.17	chr15	+	5006	20	novel_in_catalog	TCF12	novel	4786	21	NA	NA	-123	-1	combination_of_known_junctions	FALSE	canonical	1	52954	junction_17	162913.05621342256	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	521	2638	35.0	-523	False	AATAAA	-25
PB.7562.11	chr21	-	2772	16	novel_not_in_catalog	ITGB2	novel	2125	7	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	3924	junction_4	335356.42043681757	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	88	2361	20.0	-6	True	AATAAA	-23
PB.1395.16	chr10	+	2188	11	incomplete-splice_match	WASHC2C	ENST00000623400.3	4616	31	45990	337	-5762	-2	5prime_fragment	FALSE	canonical	1	1507	junction_9	105904.56059703001	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	394	1989	0.0	NA	False	AATAAA	-11
PB.9996.12	chr6	-	2306	7	novel_in_catalog	CUL7	novel	5254	26	NA	NA	67	-3515	combination_of_known_junctions	FALSE	canonical	1	18420	junction_6	102528.76881474128	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	177	2030	25.0	2	True	AATAAA	-26
PB.9996.10	chr6	-	2795	9	incomplete-splice_match	CUL7	ENST00000265348.7	5254	26	-199	10190	47	-2220	3prime_fragment	FALSE	canonical	1	111127	junction_8	68982.18317695791	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	286	2586	10.0	-18	True	NA	NA
PB.7562.14	chr21	-	3618	1	novel_in_catalog	ITGB2	novel	4781	15	NA	NA	-6	-7010	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	7880	False	NA	NA
PB.11547.3	chr9	-	3186	10	incomplete-splice_match	FBXO10	ENST00000432825.6	4575	11	-129	4700	-33	-598	3prime_fragment	FALSE	canonical	1	27151	junction_9	22262.675291523312	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	5	2878	20.0	-3	True	NA	NA
PB.4145.1	chr16	-	2021	4	full-splice_match	AC009041.2	ENST00000563863.5	1728	4	-290	-3	2	0	multi-exon	FALSE	canonical	1	10979	junction_3	31441.38824684573	NA	1	NA	TRUE	NA	NA	NA	A	coding	100	303	1024	1326	15.0	18	True	AATGAA	-22
PB.5939.4	chr19	-	2291	12	full-splice_match	NFKBID	ENST00000641389.1	1834	12	110	-567	8	-21	multi-exon	FALSE	canonical	1	47405	junction_11	21515.918939663763	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	465	1406	100.0	-1	True	NA	NA
PB.4690.2	chr17	+	2486	3	novel_not_in_catalog	GP1BA	novel	2501	2	NA	NA	-25	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	10869.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	14	2020	20.0	-5	True	NA	NA
PB.4690.1	chr17	+	2543	2	full-splice_match	GP1BA	ENST00000329125.5	2501	2	-43	1	-43	-1	multi-exon	FALSE	canonical	1	21738	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	32	2077	20.0	0	True	NA	NA
PB.2637.39	chr12	+	2145	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10364	8125	no_combination_of_known_junctions	FALSE	canonical	1	143129	junction_13	1658332.372432277	NA	1	NA	TRUE	NA	NA	NA	B	coding	453	1362	348	1709	20.0	3	True	AATAAA	-20
PB.3140.2	chr13	-	1760	3	full-splice_match	TSC22D1	ENST00000261489.6	3135	3	-7	1382	-7	-6	multi-exon	FALSE	canonical	1	2922424	junction_2	110420.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	255	659	35.0	5	True	AATAAA	-17
PB.2637.37	chr12	+	2090	15	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10363	8018	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	2011877.5240236851	NA	0	NA	TRUE	NA	NA	NA	B	coding	470	1413	349	1761	15.0	2	True	AATAAA	-13
PB.2637.36	chr12	+	1630	15	full-splice_match	PCBP2	ENST00000359462.9	1814	15	-26	210	1	2	multi-exon	FALSE	non_canonical	0	0	junction_7	1981267.650566395	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	350	1450	20.0	1	True	ATTAAA	-24
PB.2637.35	chr12	+	1643	13	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12266	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1830378.916353226	NA	3	NA	TRUE	NA	NA	NA	B	coding	321	966	326	1291	20.0	1	True	ATTAAA	-12
PB.2637.34	chr12	+	1700	14	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12281	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1777074.7595694626	NA	3	NA	TRUE	NA	NA	NA	B	coding	335	1008	326	1333	45.0	1	True	ATTAAA	-27
PB.2637.33	chr12	+	1708	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12304	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	1004077.6448941696	NA	9	1	TRUE	NA	NA	NA	B	coding	322	969	350	1318	15.0	1	True	AATAGA	-18
PB.2637.32	chr12	+	1540	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10612	12293	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	1726767.0855152595	NA	1	NA	TRUE	NA	NA	NA	B	coding	353	1062	100	1161	25.0	-8693	False	ATTAAA	-39
PB.2637.31	chr12	+	1949	15	full-splice_match	PCBP2	ENST00000552296.6	1342	15	-265	-342	1	106	multi-exon	FALSE	canonical	1	457962	junction_3	1830760.3282689778	NA	2	1	TRUE	NA	NA	NA	C	coding	361	1086	350	1435	10.0	1	True	NA	NA
PB.3892.12	chr15	+	3313	20	novel_not_in_catalog	TCF12	novel	4786	21	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	770	junction_19	136468.97779868613	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	262	2310	40.0	-7	True	AATAAA	-26
PB.3432.15	chr14	+	4817	14	novel_in_catalog	FRMD6	novel	563	4	NA	NA	127	-7	combination_of_known_junctions	FALSE	canonical	1	24013	junction_1	108136.07654947905	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	258	2126	20.0	-41	True	AATAAA	-14
PB.3432.14	chr14	+	4454	14	full-splice_match	FRMD6	ENST00000395718.6	4828	14	77	297	-12	0	multi-exon	FALSE	canonical	1	159380	junction_4	77071.40559401187	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	209	2053	75.0	-12	True	NA	NA
PB.3432.17	chr14	+	4527	14	novel_in_catalog	FRMD6	novel	563	4	NA	NA	127	0	combination_of_known_junctions	FALSE	canonical	1	24013	junction_1	108136.07654947905	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	258	2126	75.0	-41	True	NA	NA
PB.3432.16	chr14	+	4919	14	novel_in_catalog	FRMD6	novel	563	4	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	24013	junction_1	112904.62541145856	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	381	2225	25.0	1	True	AATAAA	-17
PB.2300.2	chr11	+	3779	8	full-splice_match	IL10RA	ENST00000533700.5	2180	8	3	-1602	0	0	multi-exon	FALSE	canonical	1	29252	junction_1	89155.60581754732	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	265	1941	30.0	0	True	AATAAA	-15
PB.3892.11	chr15	+	1898	17	incomplete-splice_match	TCF12	ENST00000267811.9	6061	20	42	26616	-8	13	3prime_fragment	FALSE	canonical	1	296234	junction_6	91602.74672189745	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1635	263	1897	50.0	-8	True	NA	NA
PB.3432.13	chr14	+	4484	14	full-splice_match	FRMD6	ENST00000344768.9	2972	14	-18	-1494	-18	0	multi-exon	FALSE	canonical	1	210731	junction_4	68209.22441521708	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	215	2083	75.0	-18	True	NA	NA
PB.3432.12	chr14	+	2262	14	full-splice_match	FRMD6	ENST00000344768.9	2972	14	-19	729	-19	-562	multi-exon	FALSE	canonical	1	210731	junction_4	68209.22441521708	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	216	2084	60.0	-19	True	NA	NA
PB.11547.4	chr9	-	2255	8	novel_in_catalog	FBXO10	novel	4575	11	NA	NA	-31	7	combination_of_known_junctions	FALSE	canonical	1	6603	junction_1	32726.407078775304	NA	1	NA	TRUE	NA	NA	NA	C	coding	711	2136	3	2138	20.0	-1	True	NA	NA
PB.9503.5	chr5	+	2205	12	full-splice_match	HARS2	ENST00000642752.1	2346	12	167	-26	6	1	multi-exon	FALSE	canonical	1	23107	junction_6	113572.76614183276	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	30	1451	20.0	6	True	AATAAA	-14
PB.3432.18	chr14	+	4504	14	novel_in_catalog	FRMD6	novel	563	4	NA	NA	126	0	combination_of_known_junctions	FALSE	canonical	1	24013	junction_1	112904.62541145856	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	259	2103	75.0	-42	True	NA	NA
PB.944.1	chr1	+	2884	5	novel_not_in_catalog	ZBTB37	novel	2323	4	NA	NA	1	4281	any annotated donor/acceptor	FALSE	canonical	1	2314	junction_4	15193.351481815986	NA	1	NA	TRUE	NA	NA	NA	A	coding	413	1242	276	1517	30.0	-24	True	NA	NA
PB.6817.1	chr2	-	1748	11	incomplete-splice_match	SCN9A	ENST00000454569.6	3231	15	-6	8803	-6	2096	3prime_fragment	FALSE	canonical	1	21782	junction_4	4487.174104043657	NA	0	NA	TRUE	NA	NA	NA	A	coding	473	1419	330	1748	70.0	1	True	NA	NA
PB.9502.3	chr5	-	1919	13	full-splice_match	HARS	ENST00000644191.1	1945	13	24	2	-2	-1	multi-exon	FALSE	canonical	1	653526	junction_10	233344.0081688526	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	40	1569	15.0	23	True	AATAAA	-15
PB.11730.2	chr9	-	2716	4	full-splice_match	ZFP37	ENST00000374227.7	6266	4	-4	3554	-4	307	multi-exon	FALSE	canonical	1	10166	junction_3	8887.916678777367	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	33	1925	30.0	3	True	NA	NA
PB.1436.5	chr10	-	2945	10	incomplete-splice_match	DNA2	ENST00000399179.6	3207	22	148	20832	-58	1033	internal_fragment	FALSE	canonical	1	80997	junction_9	18101.18281040779	NA	0	NA	TRUE	NA	NA	NA	B	coding	549	1650	110	1759	35.0	-43	True	AATAAA	-20
PB.447.8	chr1	+	1815	11	full-splice_match	ATG4C	ENST00000317868.8	2938	11	2	1121	2	-1121	multi-exon	FALSE	canonical	1	52956	junction_1	48721.310432294405	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	206	1582	40.0	0	True	AATAAA	-37
PB.1436.4	chr10	-	3627	21	novel_in_catalog	DNA2	novel	3468	17	NA	NA	-45	298	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	32052.972625756564	NA	0	NA	TRUE	NA	NA	NA	B	coding	1060	3183	97	3279	30.0	-30	True	AATAAA	-26
PB.9238.5	chr5	-	2697	14	full-splice_match	PLK2	ENST00000274289.7	2960	14	175	88	1	-83	multi-exon	FALSE	canonical	1	526945	junction_13	77251.44539349807	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	127	2184	40.0	0	True	AATAAA	-20
PB.447.1	chr1	+	1783	11	full-splice_match	ATG4C	ENST00000371120.7	2890	11	-29	1136	-29	-1136	multi-exon	FALSE	canonical	1	50711	junction_1	49214.830345029135	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	189	1565	25.0	0	True	AATAAA	-22
PB.1436.3	chr10	-	3924	21	novel_in_catalog	DNA2	novel	3468	17	NA	NA	-32	-316	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	32052.972625756564	NA	1	NA	TRUE	NA	NA	NA	B	coding	1060	3183	84	3266	25.0	-17	True	AATAAA	-13
PB.7382.5	chr20	+	3098	7	novel_not_in_catalog	STX16-NPEPL1	novel	3433	23	NA	NA	19236	-10239	any annotated donor/acceptor	FALSE	canonical	1	40618	junction_6	149415.92839192957	NA	2	NA	TRUE	NA	NA	NA	B	coding	324	975	28	1002	30.0	0	True	NA	NA
PB.7382.4	chr20	+	2494	11	novel_in_catalog	STX16-NPEPL1	novel	3433	23	NA	NA	19228	430	intron_retention	FALSE	canonical	1	278057	junction_1	75174.92159064751	NA	0	NA	TRUE	NA	NA	NA	B	coding	412	1239	36	1274	5.0	-8	True	ATTAAA	-18
PB.7382.3	chr20	+	2811	7	novel_not_in_catalog	STX16-NPEPL1	novel	3433	23	NA	NA	19226	-10244	any annotated donor/acceptor	FALSE	canonical	1	13541	junction_6	158112.28491003547	NA	3	NA	TRUE	NA	NA	NA	B	coding	276	831	38	868	30.0	-10	True	NA	NA
PB.7382.2	chr20	+	3347	10	novel_in_catalog	STX16-NPEPL1	novel	3433	23	NA	NA	19218	433	intron_retention	FALSE	canonical	1	278057	junction_1	79237.12919809473	NA	2	1	TRUE	NA	NA	NA	B	coding	393	1182	46	1227	5.0	-85	False	ATTAAA	-21
PB.7382.1	chr20	+	2158	12	full-splice_match	NPEPL1	ENST00000356091.10	2378	12	219	1	219	-1	multi-exon	FALSE	canonical	1	278057	junction_1	71910.2451740483	NA	0	NA	TRUE	NA	NA	NA	A	coding	523	1572	70	1641	5.0	32	True	ATTAAA	-21
PB.447.6	chr1	+	2574	11	full-splice_match	ATG4C	ENST00000317868.8	2938	11	2	362	2	-362	multi-exon	FALSE	canonical	1	52956	junction_1	48721.310432294405	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	206	1582	20.0	0	True	AATAAA	-13
PB.6389.3	chr2	+	2879	8	novel_in_catalog	PPP1CB	novel	721	5	NA	NA	-33	-612	combination_of_known_junctions	FALSE	canonical	1	5394	junction_1	717851.8794388702	NA	12	NA	TRUE	NA	NA	NA	C	coding	299	900	247	1146	30.0	3	True	AGTAAA	-14
PB.6389.2	chr2	+	4645	9	full-splice_match	PPP1CB	ENST00000358506.6	4771	9	-1	127	1	-127	multi-exon	FALSE	canonical	1	117987	junction_1	641166.1381704726	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	162	1145	20.0	3	True	AATAAA	-24
PB.1532.4	chr10	+	915	11	full-splice_match	RPP30	ENST00000371703.7	2589	11	258	1416	1	8	multi-exon	FALSE	canonical	1	457427	junction_8	53485.437025044484	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	14	820	40.0	0	True	AATAAA	-25
PB.1532.5	chr10	+	2901	11	full-splice_match	RPP30	ENST00000371703.7	2589	11	258	-570	1	-502	multi-exon	FALSE	canonical	1	457427	junction_8	53485.437025044484	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	14	820	20.0	0	True	ATTAAA	-16
PB.1532.2	chr10	+	2095	9	novel_in_catalog	RPP30	novel	2589	11	NA	NA	2	129	intron_retention	FALSE	canonical	1	485019	junction_1	44151.23086619443	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	34	696	10.0	2	True	AATAAA	-12
PB.1436.1	chr10	-	4246	21	novel_in_catalog	DNA2	novel	3468	17	NA	NA	-38	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	32052.972625756564	NA	0	NA	TRUE	NA	NA	NA	B	coding	1060	3183	90	3272	30.0	-23	True	AATAAA	-17
PB.6389.5	chr2	+	3558	9	full-splice_match	PPP1CB	ENST00000358506.6	4771	9	-68	1281	4	1	multi-exon	FALSE	canonical	1	117987	junction_1	641166.1381704726	NA	3	NA	TRUE	NA	NA	NA	C	coding	327	984	229	1212	40.0	4	True	AATAAA	-22
PB.1532.1	chr10	+	1895	9	novel_in_catalog	RPP30	novel	2589	11	NA	NA	-1	7	intron_retention	FALSE	canonical	1	485019	junction_1	44151.23086619443	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	37	699	40.0	-1	True	AATAAA	-24
PB.6389.9	chr2	+	4040	5	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	29	4	any annotated donor/acceptor	FALSE	canonical	1	56	junction_2	754844.1708489823	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	ATTAAA	-25
PB.7732.1	chr22	+	2471	1	intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.1489.1	chr10	-	3391	12	incomplete-splice_match	DLG5	ENST00000463362.5	2927	17	7669	-1115	-150	5	5prime_fragment	FALSE	canonical	1	247554	junction_9	76963.93911801802	NA	0	NA	TRUE	NA	NA	NA	A	coding	449	1350	388	1737	20.0	NA	False	AATAAA	-21
PB.8334.6	chr3	-	4333	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	-1	33099	-1	725	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1407	4221	113	4333	55.0	-1	True	NA	NA
PB.2109.4	chr11	-	3119	6	novel_in_catalog	TMEM134	novel	3534	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	30748	junction_4	224712.14984152504	NA	2	NA	TRUE	NA	NA	NA	B	coding	110	333	82	414	25.0	-29	True	AATAAA	-16
PB.9502.1	chr5	-	2951	12	novel_in_catalog	HARS	novel	1896	13	NA	NA	2	0	intron_retention	TRUE	canonical	1	653526	junction_9	237249.03208357887	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	1622	2599	10.0	-21	True	AATAAA	-17
PB.2109.1	chr11	-	3122	6	novel_in_catalog	TMEM134	novel	3534	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	319634	junction_4	117474.0024182372	NA	0	NA	TRUE	NA	NA	NA	B	coding	139	420	64	483	15.0	-11	True	AATAAA	-21
PB.2109.3	chr11	-	3252	5	novel_in_catalog	TMEM134	novel	3534	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	56094	junction_3	226351.69917671813	NA	1	1	TRUE	NA	NA	NA	B	coding	119	360	81	440	20.0	-28	True	AATAAA	-17
PB.2109.2	chr11	-	2956	7	novel_in_catalog	TMEM134	novel	3534	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	3702	junction_3	220812.82628330772	NA	1	NA	TRUE	NA	NA	NA	B	coding	142	429	48	476	20.0	5	True	AATAAA	-18
PB.1146.1	chr1	-	2767	13	novel_not_in_catalog	GTF2IP20	novel	2966	13	NA	NA	-25	-1	intron_retention	FALSE	canonical	1	274	junction_8	18595.558017231488	NA	2	NA	TRUE	NA	NA	NA	A	coding	251	756	1868	2623	25.0	-51	False	NA	NA
PB.1508.1	chr10	+	3163	1	genic	AL731569.1	novel	NA	NA	NA	NA	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	116	351	2306	2656	15.0	-548	False	AATAAA	-14
PB.10737.10	chr7	+	4099	20	novel_in_catalog	SRRT	novel	582	2	NA	NA	-17	0	intron_retention	TRUE	canonical	1	25061	junction_2	494037.5391151944	NA	16	2	TRUE	NA	NA	NA	C	coding	645	1938	2051	3988	10.0	13	True	AATAAA	-12
PB.10737.11	chr7	+	3036	19	incomplete-splice_match	SRRT	ENST00000611405.4	2905	20	-41	0	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_17	429621.7547386241	NA	2	1	TRUE	NA	NA	NA	C	coding	852	2559	201	2759	10.0	14	True	AATAAA	-16
PB.7708.1	chr22	-	2820	20	incomplete-splice_match	MORC2	ENST00000215862.8	4469	27	25968	7	18	-7	5prime_fragment	FALSE	canonical	1	208331	junction_14	83514.48599688619	NA	1	NA	TRUE	NA	NA	NA	B	coding	848	2547	89	2635	35.0	-1388	False	TATAAA	-13
PB.8664.12	chr4	-	2199	6	full-splice_match	HAUS3	ENST00000443786.2	2430	6	-3	234	-3	-234	multi-exon	FALSE	canonical	1	17673	junction_5	72074.50426773673	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1662	536	2197	60.0	-47	False	NA	NA
PB.7708.2	chr22	-	4282	27	novel_not_in_catalog	MORC2	novel	5181	26	NA	NA	-1402	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	109592.28241689592	NA	0	NA	TRUE	NA	NA	NA	B	coding	1029	3090	1009	4098	35.0	-666	False	TATAAA	-12
PB.8664.14	chr4	-	1893	5	full-splice_match	HAUS3	ENST00000243706.8	5620	5	1	3726	1	-234	multi-exon	FALSE	canonical	1	9009	junction_4	77293.80384610398	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1662	230	1891	60.0	-12	True	NA	NA
PB.2602.1	chr12	+	2054	9	incomplete-splice_match	ASIC1	ENST00000552438.5	3327	10	3693	548	518	-89	5prime_fragment	FALSE	canonical	1	70631	junction_2	15554.102971061206	NA	1	NA	TRUE	NA	NA	NA	A	coding	319	960	15	974	5.0	-8964	False	TATAAA	-16
PB.4644.1	chr17	-	3568	8	full-splice_match	ABR	ENST00000543210.6	1049	8	3	-2522	3	-12	multi-exon	FALSE	canonical	1	8782	junction_7	225768.5324484313	NA	2	NA	TRUE	NA	NA	NA	C	coding	310	933	95	1027	40.0	-25	True	AATAAA	-14
PB.1018.1	chr1	-	6115	27	full-splice_match	ASPM	ENST00000294732.11	6132	27	25	-8	25	8	multi-exon	FALSE	canonical	1	35117	junction_10	80694.94566433952	NA	2	NA	TRUE	NA	NA	NA	C	coding	1892	5679	233	5911	25.0	-1	True	AATAAA	-27
PB.4644.3	chr17	-	5656	24	novel_not_in_catalog	ABR	novel	5289	23	NA	NA	40	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	201099.01968108118	NA	77	4	TRUE	NA	NA	NA	C	coding	822	2469	628	3096	10.0	-12	True	AATAAA	-33
PB.4644.4	chr17	-	5327	23	full-splice_match	ABR	ENST00000544583.6	5595	23	268	0	268	0	multi-exon	FALSE	canonical	1	11920	junction_22	160008.92884572214	NA	4	NA	TRUE	NA	NA	NA	C	coding	813	2442	333	2774	25.0	1811	False	AATAAA	-26
PB.4644.7	chr17	-	5062	22	full-splice_match	ABR	ENST00000291107.6	2673	22	-1	-2388	-1	-2	multi-exon	TRUE	canonical	1	176527	junction_21	120160.22921934426	NA	1	NA	TRUE	NA	NA	NA	C	coding	822	2469	34	2502	10.0	0	True	AATAAA	-33
PB.4644.6	chr17	-	5394	23	full-splice_match	ABR	ENST00000302538.9	5289	23	-107	2	-107	-2	multi-exon	FALSE	canonical	1	80440	junction_22	150881.7201638806	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	255	2834	10.0	-5	True	AATAAA	-33
PB.4644.8	chr17	-	2405	2	novel_not_in_catalog	ABR	novel	5289	23	NA	NA	4211	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	100	303	433	735	10.0	3786	False	AATAAA	-33
PB.11442.14	chr9	+	4534	25	full-splice_match	RIC1	ENST00000418622.7	6658	25	15	2109	15	145	multi-exon	FALSE	canonical	1	18267	junction_13	46228.429038354385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1386	4161	177	4337	50.0	27	False	TATAAA	-12
PB.11671.5	chr9	+	2597	5	incomplete-splice_match	TDRD7	ENST00000355295.4	3834	17	183	54959	183	-41780	3prime_fragment	FALSE	canonical	1	64159	junction_1	38679.21235221188	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	113	772	45.0	37	True	AATAAA	-15
PB.8874.11	chr4	-	1718	6	full-splice_match	PPM1K	ENST00000508256.5	923	6	70	-865	0	159	multi-exon	FALSE	canonical	1	29093	junction_5	84101.523596187	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	374	835	95.0	-1	True	NA	NA
PB.8149.3	chr3	+	2331	5	full-splice_match	TEX264	ENST00000415259.5	2290	5	-8	-33	2	-1	multi-exon	FALSE	canonical	1	30506	junction_1	284553.8807484445	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	1090	2031	15.0	-5	True	AATAAA	-21
PB.8149.2	chr3	+	4326	4	novel_not_in_catalog	TEX264	novel	531	3	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1197	junction_3	301716.97496421303	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	3073	4023	10.0	-19	True	AATAAA	-24
PB.8149.1	chr3	+	1398	5	full-splice_match	TEX264	ENST00000341333.9	1340	5	-59	1	-2	0	multi-exon	FALSE	canonical	1	230572	junction_1	207030.70826027234	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	151	1092	10.0	-710	False	AATAAA	-27
PB.6395.1	chr2	-	4261	10	full-splice_match	ALK	ENST00000642122.1	2513	10	33	-1781	33	1781	multi-exon	FALSE	canonical	1	6334	junction_6	1896.9901761461658	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	372	2030	30.0	3754	False	AATAAA	-16
PB.6395.2	chr2	-	2429	10	full-splice_match	ALK	ENST00000642122.1	2513	10	82	2	82	1	multi-exon	FALSE	canonical	1	6334	junction_6	1896.9901761461658	NA	4	NA	TRUE	NA	NA	NA	C	coding	552	1659	323	1981	40.0	-1	True	AATAAA	-20
PB.11442.13	chr9	+	8486	26	novel_not_in_catalog	RIC1	novel	4127	22	NA	NA	-10	1705	any annotated donor/acceptor	FALSE	canonical	1	23089	junction_5	43832.272596816154	NA	5	NA	TRUE	NA	NA	NA	C	coding	1422	4269	202	4470	40.0	2	True	NA	NA
PB.4456.6	chr16	+	3811	15	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	-1	-27	combination_of_known_junctions	TRUE	canonical	1	21157	junction_3	219708.26372182314	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	326	2404	65.0	-4	True	NA	NA
PB.4456.7	chr16	+	3758	14	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2982	junction_1	192085.03774208622	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	234	2315	30.0	-4	True	NA	NA
PB.4456.4	chr16	+	3846	15	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	58866	junction_2	202133.9031298691	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2082	322	2403	30.0	0	True	NA	NA
PB.4456.5	chr16	+	3875	15	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	4108	junction_1	212825.61307659512	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	352	2433	30.0	-4	True	NA	NA
PB.4456.2	chr16	+	3667	14	full-splice_match	ADGRG1	ENST00000562631.5	4042	14	372	3	-12	0	multi-exon	FALSE	canonical	1	76935	junction_1	161900.05051477402	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	161	2224	30.0	-639	False	NA	NA
PB.4456.3	chr16	+	3773	15	full-splice_match	ADGRG1	ENST00000562558.5	3858	15	85	0	0	0	multi-exon	FALSE	canonical	1	58866	junction_2	190759.75219114096	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	267	2330	30.0	-5	True	NA	NA
PB.4456.1	chr16	+	3695	14	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	76935	junction_1	178868.8616765575	NA	3	NA	TRUE	NA	NA	NA	C	coding	693	2082	164	2245	20.0	-642	False	NA	NA
PB.10999.31	chr8	+	6565	40	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-2	10	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	232258.09706994845	NA	1	NA	TRUE	NA	NA	NA	C	coding	2055	6168	292	6459	15.0	-5	True	AATAAA	-36
PB.5639.1	chr19	+	430	4	full-splice_match	RPL36	ENST00000347512.7	707	4	66	211	-33	-2	multi-exon	FALSE	canonical	1	9902104	junction_3	2608541.2351954277	NA	0	NA	TRUE	NA	NA	NA	A	coding	105	318	69	386	10.0	-15	True	AATAAA	-15
PB.4456.8	chr16	+	3806	15	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	21683	junction_3	227139.54987867424	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	807	2363	30.0	-3	True	NA	NA
PB.4456.9	chr16	+	3664	15	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	6750	junction_3	221610.85859668336	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	314	2221	30.0	8	True	NA	NA
PB.1463.1	chr10	+	2997	9	novel_in_catalog	MCU	novel	2949	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1762	junction_1	121704.0019093456	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	799	1128	30.0	-14	True	AATAAA	-17
PB.12293.15	chrX	-	4268	8	full-splice_match	RBMX	ENST00000562646.5	2148	8	3	-2123	0	440	multi-exon	FALSE	canonical	1	87723	junction_5	124648.03785909528	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	153	1043	95.0	2	True	NA	NA
PB.1463.3	chr10	+	3100	10	novel_in_catalog	MCU	novel	2949	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7972	junction_1	122553.1130381164	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	901	1230	30.0	0	True	AATAAA	-18
PB.1463.2	chr10	+	2945	8	full-splice_match	MCU	ENST00000373053.7	2949	8	0	4	0	-1	multi-exon	FALSE	canonical	1	95943	junction_1	72663.12698181596	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	22	1077	30.0	-12	True	AATAAA	-16
PB.1495.2	chr10	-	3092	3	novel_not_in_catalog	ZCCHC24	novel	4933	4	NA	NA	40684	-1320	any annotated donor/acceptor	FALSE	canonical	1	1672	junction_2	106738.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	62	189	204	392	90.0	NA	False	NA	NA
PB.1463.4	chr10	+	2860	9	novel_not_in_catalog	MCU	novel	2949	8	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	108646.74816571537	NA	1	1	TRUE	NA	NA	NA	C	coding	109	330	662	991	30.0	7	True	AATAAA	-17
PB.9049.3	chr4	+	4773	2	incomplete-splice_match	TMA16	ENST00000508268.1	608	6	-61	5912	-20	-3814	3prime_fragment	FALSE	canonical	1	421635	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-43	True	NA	NA
PB.1495.1	chr10	-	3429	4	full-splice_match	ZCCHC24	ENST00000372336.3	4933	4	184	1320	184	-1320	multi-exon	FALSE	canonical	1	158411	junction_3	29159.927827223593	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	4	729	90.0	-29	True	NA	NA
PB.12293.17	chrX	-	1570	9	full-splice_match	RBMX	ENST00000320676.11	2012	9	-53	495	-14	2	multi-exon	FALSE	canonical	1	87723	junction_6	121589.22704438087	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	209	1384	10.0	0	True	AGTAAA	-18
PB.8520.8	chr3	+	3996	26	full-splice_match	FNDC3B	ENST00000415807.6	5083	26	-9	1096	-9	194	multi-exon	FALSE	canonical	1	216126	junction_1	68844.09593095402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1200	3603	194	3796	85.0	0	True	NA	NA
PB.8520.9	chr3	+	5062	26	full-splice_match	FNDC3B	ENST00000336824.8	7904	26	-47	2889	-47	5	multi-exon	FALSE	canonical	1	64121	junction_1	85473.48032023967	NA	3	NA	TRUE	NA	NA	NA	C	coding	1200	3603	159	3761	20.0	-3797	False	NA	NA
PB.12215.3	chrX	+	2504	14	full-splice_match	ATG4A	ENST00000372246.7	2501	14	-5	2	-5	-2	multi-exon	FALSE	canonical	1	11590	junction_3	50752.67725739106	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	600	1547	25.0	-9	True	AATAAA	-20
PB.12215.2	chrX	+	1713	13	full-splice_match	ATG4A	ENST00000372232.7	2315	13	107	495	6	308	multi-exon	FALSE	canonical	1	64953	junction_3	30177.590445284615	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	53	1249	35.0	-13	True	AATAAA	-15
PB.12215.1	chrX	+	2179	13	full-splice_match	ATG4A	ENST00000372232.7	2315	13	134	2	-8	-2	multi-exon	FALSE	canonical	1	64953	junction_3	30177.590445284615	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	26	1222	25.0	-13	False	AATAAA	-20
PB.1161.3	chr1	-	1700	7	full-splice_match	PYCR2	ENST00000343818.10	1689	7	-11	0	8	0	multi-exon	FALSE	canonical	1	777757	junction_6	237304.69395554176	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	161	1123	15.0	-21	True	AATAAA	-18
PB.6606.1	chr2	+	3729	4	full-splice_match	MRPL35	ENST00000337109.8	3727	4	0	-2	0	2	multi-exon	FALSE	canonical	1	434181	junction_1	18074.395413278853	NA	1	NA	TRUE	NA	NA	NA	C	coding	188	567	35	601	20.0	-6	True	AATAAA	-21
PB.8520.1	chr3	+	7025	26	full-splice_match	FNDC3B	ENST00000415807.6	5083	26	-16	-1926	-16	-968	multi-exon	FALSE	canonical	1	216126	junction_1	68844.09593095402	NA	5	NA	TRUE	NA	NA	NA	C	coding	1200	3603	201	3803	20.0	-7	True	AATAAA	-19
PB.8520.2	chr3	+	3777	25	novel_in_catalog	FNDC3B	novel	946	4	NA	NA	-72	194	no_combination_of_known_junctions	TRUE	canonical	1	9246	junction_5	98479.36706438076	NA	0	NA	TRUE	NA	NA	NA	C	coding	1106	3321	257	3577	85.0	-4748	False	NA	NA
PB.8520.3	chr3	+	5155	26	full-splice_match	FNDC3B	ENST00000415807.6	5083	26	-58	-14	-58	14	multi-exon	FALSE	canonical	1	216126	junction_1	68844.09593095402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1200	3603	243	3845	20.0	-49	True	NA	NA
PB.8520.4	chr3	+	1847	3	incomplete-splice_match	FNDC3B	ENST00000421757.5	946	4	-46	52310	-46	-51846	3prime_fragment	FALSE	canonical	1	216126	junction_1	147225.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	742	1044	85.0	-37	True	ATTAAA	-29
PB.2808.10	chr12	-	3000	9	full-splice_match	CEP83	ENST00000547575.5	3122	9	118	4	112	-4	multi-exon	FALSE	canonical	1	28705	junction_8	37835.598118702976	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	457	1491	30.0	-3	True	AATAAA	-11
PB.8520.6	chr3	+	6745	25	novel_in_catalog	FNDC3B	novel	946	4	NA	NA	-15	-965	no_combination_of_known_junctions	FALSE	canonical	1	9246	junction_5	98479.36706438076	NA	2	NA	TRUE	NA	NA	NA	C	coding	1106	3321	200	3520	25.0	-6	True	AATAAA	-22
PB.12293.10	chrX	-	3570	11	novel_in_catalog	RBMX	novel	837	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	11766	junction_9	161729.94453050432	NA	2	NA	TRUE	NA	NA	NA	C	coding	352	1059	314	1372	15.0	-7	True	AATAAA	-13
PB.1313.5	chr10	+	3018	6	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	9	-736	any annotated donor/acceptor	FALSE	canonical	1	11659	junction_1	58534.344774328856	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	314	1273	80.0	-58	False	NA	NA
PB.4676.2	chr17	-	5637	20	novel_in_catalog	ATP2A3	novel	4826	22	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	164020	junction_19	157639.3685541978	NA	15	NA	TRUE	NA	NA	NA	C	coding	774	2325	146	2470	25.0	0	True	AATAAA	-17
PB.11206.3	chr8	-	3800	9	novel_not_in_catalog	PAG1	novel	10744	9	NA	NA	0	-3884	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	49804.24099772403	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	653	1879	100.0	-1	True	AAAAAG	-29
PB.4676.1	chr17	-	4742	21	full-splice_match	ATP2A3	ENST00000397041.7	4675	21	-60	-7	-15	2	multi-exon	FALSE	canonical	1	164020	junction_20	160941.7215108003	NA	1	1	TRUE	NA	NA	NA	C	coding	999	3000	189	3188	10.0	-1	True	AATAAA	-25
PB.11624.7	chr9	+	3410	3	full-splice_match	RMI1	ENST00000325875.7	3420	3	-1	11	-1	-11	multi-exon	FALSE	canonical	1	19832	junction_1	33232.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	334	2211	55.0	-28	True	ATTAAA	-10
PB.11206.4	chr8	-	2415	1	incomplete-splice_match	PAG1	ENST00000220597.4	10744	9	135478	6366	-810	-3885	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	136	411	261	671	95.0	NA	False	AAAAAG	-28
PB.652.4	chr1	-	2710	5	full-splice_match	WARS2	ENST00000495746.5	621	5	-10	-2079	7	-2	multi-exon	FALSE	canonical	1	6502	junction_2	66655.56118397023	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	21	599	15.0	-15	True	ACTAAA	-18
PB.2515.10	chr12	-	2530	17	full-splice_match	INTS13	ENST00000261191.11	2974	17	299	145	-50	-141	multi-exon	FALSE	canonical	1	234503	junction_16	88509.7959619972	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	239	2359	50.0	-43	True	TATAAA	-16
PB.11581.1	chr9	+	1643	14	novel_not_in_catalog	ANKRD20A4	novel	4137	15	NA	NA	3	-3656	any annotated donor/acceptor	FALSE	canonical	1	57	junction_4	2407.4771788874564	NA	0	NA	TRUE	NA	NA	NA	A	coding	455	1365	279	1643	70.0	NA	False	AAGAAA	-33
PB.2515.11	chr12	-	2248	14	incomplete-splice_match	INTS13	ENST00000261191.11	2974	17	-9	8379	-4	460	3prime_fragment	FALSE	canonical	1	234503	junction_13	86195.01543730174	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1701	547	2247	60.0	-25	True	NA	NA
PB.4485.2	chr16	+	2217	9	novel_in_catalog	E2F4	novel	2096	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	659092	junction_1	179352.07272899718	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	962	1423	10.0	18	True	AATAAA	-17
PB.4485.3	chr16	+	2079	10	full-splice_match	E2F4	ENST00000379378.7	2096	10	16	1	0	0	multi-exon	FALSE	canonical	1	659092	junction_1	174799.16258769095	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	44	1285	10.0	18	True	AATAAA	-17
PB.4485.1	chr16	+	4497	4	novel_in_catalog	E2F4	novel	2096	10	NA	NA	-2	-22	intron_retention	FALSE	canonical	1	659092	junction_1	108912.9262066211	NA	2	NA	TRUE	NA	NA	NA	C	coding	114	345	3381	3725	50.0	16	True	NA	NA
PB.2515.12	chr12	-	1737	13	novel_in_catalog	INTS13	novel	1378	8	NA	NA	-11	467	combination_of_known_junctions	FALSE	canonical	1	33439	junction_2	125961.8489837686	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1536	200	1735	65.0	-4	True	NA	NA
PB.3542.1	chr14	-	3425	11	full-splice_match	NUMB	ENST00000554546.5	3607	11	71	111	0	0	multi-exon	FALSE	canonical	1	276892	junction_9	85105.05034602823	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	287	2065	25.0	-1	True	AATAAA	-13
PB.3542.3	chr14	-	3386	10	novel_in_catalog	NUMB	novel	3607	11	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	1	95239	junction_8	129497.63823824722	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	233	2011	10.0	-32	True	AATAAA	-28
PB.3542.2	chr14	-	3345	10	novel_in_catalog	NUMB	novel	3607	11	NA	NA	-5	5	no_combination_of_known_junctions	FALSE	canonical	1	16230	junction_9	147613.91827816272	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	194	1972	10.0	-40	True	AATAAA	-26
PB.3542.5	chr14	-	3164	9	novel_in_catalog	NUMB	novel	3607	11	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	3509	junction_4	186617.4361122491	NA	1	1	TRUE	NA	NA	NA	C	coding	545	1638	155	1792	15.0	-1	True	AATAAA	-25
PB.3542.4	chr14	-	3250	9	novel_in_catalog	NUMB	novel	3607	11	NA	NA	-3	6	no_combination_of_known_junctions	FALSE	canonical	1	8012	junction_8	158978.5077321283	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	98	1876	10.0	-29	True	AATAAA	-27
PB.3542.6	chr14	-	3415	11	novel_in_catalog	NUMB	novel	3607	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	95239	junction_9	170829.92779279043	NA	2	1	TRUE	NA	NA	NA	C	coding	603	1812	236	2047	15.0	-35	True	AATAAA	-21
PB.3386.6	chr14	-	1793	13	novel_in_catalog	PPP2R3C	novel	1402	12	NA	NA	-23	-6	combination_of_known_junctions	FALSE	canonical	1	6750	junction_2	145806.63420710855	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	462	1685	45.0	-20	True	AATAAA	-16
PB.3386.5	chr14	-	1699	14	novel_in_catalog	PPP2R3C	novel	1402	12	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	1	65020	junction_13	115682.81898071746	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	222	1583	25.0	-30	True	AATAAA	-24
PB.3386.4	chr14	-	2400	12	full-splice_match	PPP2R3C	ENST00000557217.5	1846	12	-491	-63	-491	0	multi-exon	FALSE	canonical	1	113413	junction_11	101472.05964335435	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	1270	2283	25.0	-488	False	AATAAA	-25
PB.3386.2	chr14	-	1556	13	full-splice_match	PPP2R3C	ENST00000554222.5	1719	13	166	-3	-20	3	multi-exon	FALSE	canonical	1	65020	junction_12	127034.46877857271	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	423	1436	30.0	-11	True	AATAAA	-28
PB.3386.1	chr14	-	1797	13	full-splice_match	PPP2R3C	ENST00000261475.9	1839	13	36	6	-16	0	multi-exon	FALSE	canonical	1	175852	junction_12	88635.23879842693	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	319	1680	25.0	-7	True	AATAAA	-25
PB.12156.1	chrX	+	2443	3	full-splice_match	COX7B	ENST00000481445.1	2471	3	30	-2	5	2	multi-exon	FALSE	canonical	1	3564711	junction_1	519414.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-7	True	AATAAA	-37
PB.1117.4	chr1	-	4386	8	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-10	-1	no_combination_of_known_junctions	FALSE	canonical	1	4860	junction_7	71735.63156365695	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	131	1528	15.0	-17	True	AATAAA	-14
PB.1239.3	chr1	+	2002	4	full-splice_match	COX20	ENST00000411948.6	2631	4	336	293	-1	-293	multi-exon	FALSE	canonical	1	79786	junction_1	108486.47810979333	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	58	414	80.0	-4	True	NA	NA
PB.11473.1	chr9	-	1655	9	novel_in_catalog	PLIN2	novel	790	3	NA	NA	-2	-17	combination_of_known_junctions	FALSE	canonical	1	78411	junction_1	300521.89897732495	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	97	1434	35.0	-1	True	ATTAAA	-27
PB.732.2	chr1	+	4322	22	novel_in_catalog	SETDB1	novel	587	5	NA	NA	26	-7	combination_of_known_junctions	FALSE	canonical	1	146994	junction_1	57487.4779126101	NA	32	4	TRUE	NA	NA	NA	B	coding	1292	3879	80	3958	35.0	78	False	NA	NA
PB.4977.12	chr17	+	2309	9	incomplete-splice_match	FKBP10	ENST00000321562.8	2662	10	4125	6	-1814	0	5prime_fragment	FALSE	canonical	1	863990	junction_1	159274.77892760516	NA	3	NA	TRUE	NA	NA	NA	C	coding	481	1446	61	1506	15.0	-6083	False	AATAAA	-11
PB.4977.13	chr17	+	2617	5	novel_in_catalog	FKBP10	novel	2662	10	NA	NA	140	-1	intron_retention	FALSE	canonical	1	980122	junction_3	160023.9461408823	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	1402	1815	15.0	-4129	False	AATAAA	-10
PB.4977.10	chr17	+	2270	8	novel_in_catalog	FKBP10	novel	598	5	NA	NA	-5	0	no_combination_of_known_junctions	FALSE	canonical	1	4461	junction_5	413293.92354248674	NA	2	NA	TRUE	NA	NA	NA	C	coding	469	1410	52	1461	10.0	-20	True	AATAAA	-17
PB.4977.11	chr17	+	2538	10	novel_not_in_catalog	FKBP10	novel	598	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	11413	junction_9	368986.79406533955	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	47	1735	15.0	-15	True	AATAAA	-11
PB.4977.14	chr17	+	3205	3	full-splice_match	FKBP10	ENST00000464180.1	1129	3	-1401	-675	172	2	multi-exon	FALSE	canonical	1	980122	junction_1	174281.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	1985	2398	10.0	-4097	False	AATAAA	-15
PB.4977.15	chr17	+	1840	5	novel_in_catalog	FKBP10	novel	2662	10	NA	NA	178	-1	no_combination_of_known_junctions	FALSE	canonical	1	11866	junction_1	493892.9983045417	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	625	1038	15.0	-4091	False	AATAAA	-10
PB.4059.1	chr15	-	2345	6	full-splice_match	DET1	ENST00000564406.5	2315	6	-29	-1	-7	1	multi-exon	FALSE	canonical	1	15597	junction_5	25257.438418018563	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	224	1876	30.0	-18	True	AATAAA	-22
PB.7918.1	chr3	+	4301	13	novel_in_catalog	BRPF1	novel	4304	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26964	junction_8	71523.25863991532	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	421	3777	95.0	-6	True	NA	NA
PB.7918.2	chr3	+	4583	14	novel_in_catalog	BRPF1	novel	4304	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	62267	junction_7	58767.23890009491	NA	0	NA	TRUE	NA	NA	NA	C	coding	1214	3645	415	4059	95.0	0	True	NA	NA
PB.6517.9	chr2	+	2177	6	novel_in_catalog	PNO1	novel	2286	7	NA	NA	-29	-285	intron_retention	FALSE	canonical	1	117546	junction_5	138501.6314439653	NA	3	NA	TRUE	NA	NA	NA	C	coding	198	597	48	644	35.0	0	True	NA	NA
PB.8954.18	chr4	-	1817	4	incomplete-splice_match	SEC24D	ENST00000419654.6	2786	20	6	79558	6	-483	3prime_fragment	FALSE	canonical	1	188245	junction_3	93396.03944969448	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	267	692	100.0	2481	False	NA	NA
PB.7336.30	chr20	+	3482	7	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	12996	13	no_combination_of_known_junctions	FALSE	canonical	1	337	junction_3	180183.3263574136	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	14	1144	75.0	44	False	AATAGA	-27
PB.9514.1	chr5	+	3331	1	full-splice_match	PCDHB10	ENST00000239446.5	3290	1	-27	-14	-27	14	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	800	2403	228	2630	30.0	-7301	False	AATAAA	-38
PB.7336.37	chr20	+	2862	1	incomplete-splice_match	NCOA3	ENST00000372004.7	7939	23	152112	2	27012	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2899	False	AATAAA	-19
PB.7918.5	chr3	+	4684	14	full-splice_match	BRPF1	ENST00000424362.5	4712	14	6	22	6	-8	multi-exon	FALSE	canonical	1	85081	junction_7	55583.25275672297	NA	1	NA	TRUE	NA	NA	NA	C	coding	1213	3642	399	4040	50.0	16	True	AATATA	-12
PB.6143.4	chr19	-	1610	8	full-splice_match	IRF3	ENST00000601291.5	1556	8	-55	1	0	0	multi-exon	FALSE	canonical	1	73661	junction_2	294638.9173518069	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	236	1594	10.0	-1	True	AATAAA	-16
PB.6143.2	chr19	-	2380	7	full-splice_match	IRF3	ENST00000309877.11	1691	7	-690	1	0	0	multi-exon	FALSE	canonical	1	393054	junction_6	167997.8610800513	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	1022	2305	10.0	-3	True	AATAAA	-16
PB.6143.1	chr19	-	1594	8	full-splice_match	IRF3	ENST00000377139.7	1613	8	18	1	0	0	multi-exon	FALSE	canonical	1	167412	junction_7	231795.87014836294	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	236	1519	10.0	-1	True	AATAAA	-16
PB.6684.1	chr2	+	5397	22	novel_in_catalog	RGPD5	novel	3304	20	NA	NA	-3	-1716	combination_of_known_junctions	FALSE	canonical	1	465	junction_5	2093.8008577097376	NA	2	NA	TRUE	NA	NA	NA	C	coding	1480	4443	874	5316	25.0	-3	True	AATAGA	-11
PB.6020.3	chr19	+	1416	1	full-splice_match	LINC01480	ENST00000597199.1	1718	1	302	0	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	105	318	1010	1327	30.0	-82	False	NA	NA
PB.6020.2	chr19	+	5158	1	full-splice_match	LINC01480	ENST00000597199.1	1718	1	-3440	0	-3440	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	105	318	4752	5069	30.0	0	True	NA	NA
PB.6020.1	chr19	+	3563	1	full-splice_match	LINC01480	ENST00000597199.1	1718	1	-3476	1631	-3476	-1631	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-7	True	NA	NA
PB.687.2	chr1	-	3411	13	novel_not_in_catalog	NBPF10	novel	13042	90	NA	NA	59313	-104	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	7.7387911774959335	NA	32	1	TRUE	NA	NA	NA	B	coding	442	1329	568	1896	10.0	NA	False	ATTAAA	-16
PB.2824.7	chr12	+	1513	7	full-splice_match	SLC25A3	ENST00000188376.9	1909	7	106	290	6	0	multi-exon	FALSE	canonical	1	3943609	junction_1	1049694.4301959842	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	249	1334	15.0	-6237	False	AATAAA	-15
PB.2824.6	chr12	+	3593	5	novel_in_catalog	SLC25A3	novel	6087	8	NA	NA	3	0	intron_retention	FALSE	canonical	1	4042914	junction_3	736793.6711561029	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	2872	3414	15.0	-6240	False	AATAAA	-15
PB.2824.5	chr12	+	1586	8	full-splice_match	SLC25A3	ENST00000552981.5	1351	8	53	-288	-12	-1	multi-exon	FALSE	canonical	1	3943609	junction_2	980983.3942627911	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	33	1118	25.0	-6255	False	AGTAAA	-15
PB.2824.4	chr12	+	3144	6	novel_in_catalog	SLC25A3	novel	6087	8	NA	NA	5	0	intron_retention	FALSE	canonical	1	4042914	junction_4	1060654.0722577933	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	2009	2965	15.0	5	True	AATAAA	-15
PB.2824.3	chr12	+	4489	6	novel_not_in_catalog	SLC25A3	novel	6087	8	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	1973186.8245981778	NA	2	NA	TRUE	NA	NA	NA	C	coding	180	543	3768	4310	15.0	4	True	AATAAA	-15
PB.2824.2	chr12	+	1324	8	full-splice_match	SLC25A3	ENST00000552981.5	1351	8	26	1	0	0	multi-exon	FALSE	canonical	1	3943609	junction_2	980983.3942627911	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	60	1145	15.0	0	True	AATAAA	-15
PB.2824.1	chr12	+	2947	7	full-splice_match	SLC25A3	ENST00000546766.5	3236	7	1	288	0	1	multi-exon	FALSE	canonical	1	4042914	junction_5	990746.352479225	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	1810	2766	15.0	-6312	False	AATAAA	-17
PB.6939.3	chr2	+	1405	7	novel_in_catalog	NIF3L1	novel	749	4	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	1	10260	junction_1	149970.2622674094	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	101	1153	30.0	-25	True	AATAAA	-20
PB.11104.11	chr8	+	3240	13	novel_in_catalog	GPAT4	novel	572	2	NA	NA	56	518	intron_retention	FALSE	canonical	1	10332	junction_1	196816.26884200628	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	959	2329	15.0	-3556	False	AATAAA	-16
PB.6939.4	chr2	+	3959	6	novel_in_catalog	NIF3L1	novel	749	4	NA	NA	-5	0	intron_retention	FALSE	canonical	1	366455	junction_4	33973.9459974846	NA	6	NA	TRUE	NA	NA	NA	C	coding	350	1053	2662	3714	30.0	-9	True	AATAAA	-13
PB.11104.10	chr8	+	6292	13	full-splice_match	GPAT4	ENST00000396987.7	6298	13	2	4	2	-4	multi-exon	FALSE	canonical	1	250447	junction_9	143963.24071121903	NA	6	NA	TRUE	NA	NA	NA	C	coding	456	1371	926	2296	15.0	2	True	AATAAA	-13
PB.7436.5	chr21	-	3135	20	novel_in_catalog	FP565260.2	novel	1599	7	NA	NA	-20940	-14597	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	544	1635	1160	2794	50.0	NA	False	CATAAA	-25
PB.6939.5	chr2	+	1641	7	full-splice_match	NIF3L1	ENST00000359683.8	1626	7	-15	0	4	0	multi-exon	FALSE	canonical	1	30175	junction_1	142717.07024437858	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	337	1389	30.0	0	True	AATAAA	-20
PB.693.15	chr1	+	2871	23	novel_not_in_catalog	AC242426.2	novel	573	3	NA	NA	69752	43100	intron_retention	FALSE	canonical	1	900	junction_1	140286.18528108535	NA	1	NA	TRUE	NA	NA	NA	B	coding	825	2478	144	2621	15.0	451	False	AATAAA	-12
PB.318.2	chr1	+	2945	12	novel_in_catalog	CAP1	novel	3105	13	NA	NA	0	-2	intron_retention	FALSE	canonical	1	385351	junction_6	505784.8063103811	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	81	1325	15.0	-10	True	AATAAA	-16
PB.6939.6	chr2	+	1690	7	full-splice_match	NIF3L1	ENST00000409020.5	1680	7	-10	0	6	0	multi-exon	FALSE	canonical	1	52117	junction_1	134746.90318199855	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	386	1438	30.0	2	True	AATAAA	-20
PB.11761.7	chr9	-	2994	8	full-splice_match	RAB14	ENST00000373840.8	4145	8	-64	1215	-64	-1215	multi-exon	FALSE	canonical	1	385902	junction_7	279351.9307237042	NA	6	1	TRUE	NA	NA	NA	C	coding	215	648	303	950	50.0	-65	False	NA	NA
PB.1516.1	chr10	+	3763	12	full-splice_match	PAPSS2	ENST00000361175.8	3949	12	184	2	78	0	multi-exon	FALSE	canonical	1	169805	junction_1	58776.850221975394	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	186	2030	15.0	-1154	False	AATAAA	-13
PB.1516.2	chr10	+	2436	12	full-splice_match	PAPSS2	ENST00000361175.8	3949	12	213	1300	107	-1298	multi-exon	FALSE	canonical	1	169805	junction_1	58776.850221975394	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	157	2001	55.0	-1125	False	AATATA	-31
PB.6939.7	chr2	+	3074	7	novel_not_in_catalog	NIF3L1	novel	749	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	153713.31700459644	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	1777	2829	30.0	15	True	AATAAA	-13
PB.8932.9	chr4	-	2685	2	novel_not_in_catalog	PLA2G12A	novel	5226	4	NA	NA	-4	-9399	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-12	True	NA	NA
PB.11761.5	chr9	-	3002	8	novel_not_in_catalog	RAB14	novel	4145	8	NA	NA	-30	-1157	any annotated donor/acceptor	FALSE	canonical	1	4775	junction_3	361393.4570012951	NA	2	1	TRUE	NA	NA	NA	C	coding	155	468	269	736	30.0	-31	True	AATAAA	-23
PB.11761.2	chr9	-	2986	7	novel_in_catalog	RAB14	novel	4145	8	NA	NA	-41	-1141	no_combination_of_known_junctions	FALSE	canonical	1	2923	junction_6	372276.74855945545	NA	3	1	TRUE	NA	NA	NA	C	coding	196	591	278	868	30.0	-42	True	AATAAA	-39
PB.7436.4	chr21	-	5161	20	novel_in_catalog	FP565260.2	novel	1599	7	NA	NA	-20904	-14576	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	891	2676	70	2745	35.0	NA	False	ATTAAA	-19
PB.6153.1	chr19	-	2711	8	full-splice_match	IL4I1	ENST00000391826.6	1863	8	62	-910	-25	910	multi-exon	FALSE	canonical	1	121713	junction_1	52702.808794373814	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	82	1785	35.0	-7	True	NA	NA
PB.6153.2	chr19	-	2551	8	full-splice_match	IL4I1	ENST00000391826.6	1863	8	61	-749	-26	749	multi-exon	FALSE	canonical	1	121713	junction_1	52702.808794373814	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	83	1786	85.0	-8	True	NA	NA
PB.6153.4	chr19	-	1792	8	full-splice_match	IL4I1	ENST00000391826.6	1863	8	66	5	-21	-5	multi-exon	FALSE	canonical	1	121713	junction_1	52702.808794373814	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	78	1781	30.0	-3	True	ATTAAA	-11
PB.6153.5	chr19	-	1853	8	novel_not_in_catalog	IL4I1	novel	1863	8	NA	NA	36	-5	any annotated donor/acceptor	FALSE	canonical	1	260	junction_3	92436.78243678382	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	108	758	30.0	82	False	ATTAAA	-11
PB.6153.6	chr19	-	1664	8	novel_not_in_catalog	IL4I1	novel	1863	8	NA	NA	-21	-6	any annotated donor/acceptor	FALSE	canonical	1	3073	junction_1	91804.91773386896	NA	12	1	TRUE	NA	NA	NA	C	coding	267	804	78	881	30.0	-3	True	ATTAAA	-10
PB.6153.7	chr19	-	1751	7	novel_in_catalog	IL4I1	novel	1863	8	NA	NA	-17	-7	no_combination_of_known_junctions	FALSE	canonical	1	1039	junction_6	105235.45583185779	NA	5	1	TRUE	NA	NA	NA	C	coding	531	1596	147	1742	30.0	1	True	ATTAAA	-9
PB.3144.3	chr13	-	1975	4	novel_in_catalog	TPT1	novel	4814	6	NA	NA	5	-1	intron_retention	FALSE	canonical	1	15967258	junction_1	11252113.56504292	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-25	False	AATAAA	-14
PB.3144.2	chr13	-	871	6	full-splice_match	TPT1	ENST00000530705.5	4735	6	158	3706	0	0	multi-exon	FALSE	canonical	1	14831307	junction_2	11214482.357483137	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	144	662	25.0	-30	False	AATAAA	-16
PB.3144.1	chr13	-	1172	6	full-splice_match	TPT1	ENST00000530705.5	4735	6	165	3398	7	4	multi-exon	FALSE	canonical	1	14831307	junction_2	11214482.357483137	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	137	655	20.0	-23	False	AATAAA	-22
PB.11761.1	chr9	-	4092	8	full-splice_match	RAB14	ENST00000373840.8	4145	8	-30	83	-30	-83	multi-exon	FALSE	canonical	1	385902	junction_7	279351.9307237042	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	269	916	25.0	-31	True	AATAAA	-18
PB.9579.15	chr5	+	1781	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	9	1013	0	112	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	135	1535	60.0	-2	True	TTTAAA	-6
PB.9579.14	chr5	+	2096	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	42	8102	0	458	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	104	1504	60.0	-2	True	AATAAA	-33
PB.9579.17	chr5	+	3268	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	43	6929	1	506	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	7	NA	TRUE	NA	NA	NA	C	coding	466	1401	103	1503	50.0	-1	True	AAGAAA	-23
PB.9579.16	chr5	+	1750	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	42	8448	0	112	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	104	1504	60.0	-2	True	TTTAAA	-6
PB.9579.11	chr5	+	2441	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	9	353	0	-352	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	135	1535	10.0	-2	True	NA	NA
PB.9579.10	chr5	+	8763	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	42	1435	0	-1435	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	104	1504	40.0	-2	True	NA	NA
PB.5718.18	chr19	+	3684	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	-5	559	combination_of_known_junctions	FALSE	canonical	1	28228	junction_3	174306.08646031088	NA	4	NA	TRUE	NA	NA	NA	C	coding	733	2202	77	2278	95.0	10	True	NA	NA
PB.5718.19	chr19	+	3630	15	novel_in_catalog	LDLR	novel	3617	18	NA	NA	-5	559	no_combination_of_known_junctions	FALSE	canonical	1	757	junction_11	184762.75897702173	NA	2	NA	TRUE	NA	NA	NA	C	coding	715	2148	77	2224	95.0	10	True	NA	NA
PB.5718.16	chr19	+	2391	9	novel_not_in_catalog	LDLR	novel	3617	18	NA	NA	1	389	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	182509.6143001359	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	86	865	65.0	1	True	NA	NA
PB.2650.1	chr12	-	2482	9	novel_not_in_catalog	ZNF385A	novel	2369	8	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	2769	junction_8	147463.08686281246	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	260	1360	20.0	1	True	AATAAA	-25
PB.2650.2	chr12	-	2336	8	full-splice_match	ZNF385A	ENST00000338010.9	2331	8	-1	-4	-1	0	multi-exon	FALSE	canonical	1	96796	junction_7	99886.60306853682	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	56	1216	20.0	-2	True	AATAAA	-23
PB.2650.3	chr12	-	2271	7	full-splice_match	ZNF385A	ENST00000552382.5	1516	7	-14	-741	-14	-1	multi-exon	FALSE	canonical	1	18880	junction_6	132139.56654108816	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	109	1152	20.0	-14	True	AATAAA	-22
PB.5718.12	chr19	+	3996	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	1	559	no_combination_of_known_junctions	FALSE	canonical	1	19211	junction_15	174808.55266868693	NA	2	NA	TRUE	NA	NA	NA	C	coding	834	2505	86	2590	95.0	1	True	NA	NA
PB.5718.13	chr19	+	3952	17	full-splice_match	LDLR	ENST00000535915.5	2768	17	1	-1185	1	560	multi-exon	FALSE	canonical	1	4505	junction_2	178244.38264255342	NA	4	NA	TRUE	NA	NA	NA	C	coding	819	2460	86	2545	95.0	1	True	NA	NA
PB.5718.10	chr19	+	3361	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3083	junction_13	174040.91812289026	NA	1	NA	TRUE	NA	NA	NA	C	coding	809	2430	87	2516	20.0	0	True	NA	NA
PB.5718.11	chr19	+	5171	18	full-splice_match	LDLR	ENST00000558518.5	3617	18	101	-1655	0	2	multi-exon	FALSE	canonical	1	405226	junction_1	108088.50705195128	NA	3	NA	TRUE	NA	NA	NA	C	coding	860	2583	87	2669	30.0	0	True	ATTAAA	-16
PB.11417.2	chr8	-	5431	5	full-splice_match	ZNF252P	ENST00000527222.5	876	5	-7	-4548	-7	-2	multi-exon	FALSE	canonical	1	44176	junction_2	20138.54194076622	NA	17	NA	TRUE	NA	NA	NA	C	coding	461	1386	498	1883	20.0	-8	True	ATTAAA	-18
PB.8711.1	chr4	-	2688	4	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	-22	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	65749.87443503008	NA	5	NA	TRUE	NA	NA	NA	C	coding	164	495	1037	1531	30.0	-5	True	AATAAA	-22
PB.7360.5	chr20	-	3538	28	full-splice_match	ATP9A	ENST00000338821.5	8106	28	219	4349	-87	-4349	multi-exon	FALSE	canonical	1	119372	junction_27	44001.577496974154	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	47	3190	25.0	35	True	GATAAA	-17
PB.6443.30	chr2	-	2778	24	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	0	5854	any annotated donor/acceptor	FALSE	canonical	1	19300	junction_1	271606.3996280763	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	43	2556	55.0	-1	True	AATAAA	-23
PB.4716.19	chr17	+	2323	2	incomplete-splice_match	XAF1	ENST00000571135.5	565	5	-30	132	1	-132	intron_retention	FALSE	canonical	1	189887	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	94	285	33	317	100.0	1	True	NA	NA
PB.6443.31	chr2	-	2666	24	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	-1	5741	any annotated donor/acceptor	FALSE	canonical	1	19300	junction_1	271606.3996280763	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	44	2557	20.0	-2	True	AATAAA	-33
PB.9662.3	chr5	+	2779	5	full-splice_match	ZNF354B	ENST00000322434.7	2802	5	2	21	2	-21	multi-exon	FALSE	canonical	1	33883	junction_1	28292.665074184864	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	225	2063	60.0	-45	True	NA	NA
PB.11417.1	chr8	-	5324	4	full-splice_match	ZNF252P	ENST00000528392.5	599	4	0	-4725	0	-1	multi-exon	FALSE	canonical	1	15786	junction_2	29829.387638516633	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	390	1775	20.0	-1	True	ATTAAA	-19
PB.10807.8	chr7	+	1665	11	full-splice_match	ING3	ENST00000431467.1	1447	11	44	-262	44	-14	multi-exon	FALSE	canonical	1	140813	junction_4	41765.92542300481	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	22	1233	75.0	-5	True	TATAAA	-8
PB.7436.6	chr21	-	3109	21	full-splice_match	FP565260.1	ENST00000617716.3	3264	21	24	131	24	-131	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	71	2830	30.0	NA	False	NA	NA
PB.1247.2	chr1	-	3295	4	full-splice_match	ZNF670	ENST00000366503.2	1994	4	-56	-1245	-56	1245	multi-exon	FALSE	canonical	1	43200	junction_3	5823.540980842803	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	216	1385	35.0	-1	True	AATAAA	-28
PB.3444.1	chr14	-	7905	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	-21	-2281	-21	2281	multi-exon	TRUE	canonical	1	71431	junction_10	94905.65759725256	NA	5	NA	TRUE	NA	NA	NA	C	coding	872	2619	206	2824	70.0	10	True	NA	NA
PB.5803.7	chr19	-	4181	16	novel_in_catalog	AC008764.1	novel	2567	12	NA	NA	85761	-38825	intron_retention	FALSE	canonical	1	232277	junction_8	78787.89133210763	NA	1	NA	TRUE	NA	NA	NA	B	coding	782	2349	66	2414	20.0	-16	True	AATAAA	-18
PB.10807.7	chr7	+	1945	10	incomplete-splice_match	ING3	ENST00000427726.5	1718	11	369	-357	38	357	5prime_fragment	FALSE	canonical	1	26944	junction_3	68858.82464564906	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	564	1142	45.0	-11	True	AATAAA	-6
PB.8773.21	chr4	+	2684	10	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	-22	511	intron_retention	FALSE	canonical	0	0	junction_6	109750.6102155763	NA	6	1	TRUE	NA	NA	NA	C	coding	143	432	69	500	15.0	22	True	AATAAA	-16
PB.1051.7	chr1	+	2635	9	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-38	272	intron_retention	FALSE	canonical	1	19678	junction_6	44479.891176905716	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	663	1971	2633	70.0	-7	True	AATAAA	-22
PB.5803.5	chr19	-	2809	11	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	85769	-38823	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	122869.83918395107	NA	0	NA	TRUE	NA	NA	NA	B	coding	291	876	665	1540	20.0	-8	True	AATAAA	-20
PB.3364.1	chr14	+	2456	1	intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	117	354	126	479	15.0	0	True	NA	NA
PB.6517.7	chr2	+	1964	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	40	282	-33	-282	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	52	810	35.0	-4	True	NA	NA
PB.5803.4	chr19	-	2858	10	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	85761	-38823	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	131797.38135411672	NA	0	NA	TRUE	NA	NA	NA	B	coding	455	1368	222	1589	20.0	-16	True	AATAAA	-20
PB.7436.1	chr21	-	3153	21	full-splice_match	FP565260.1	ENST00000617716.3	3264	21	42	69	42	-69	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	53	2812	50.0	NA	False	CATAAA	-25
PB.5803.3	chr19	-	4027	17	full-splice_match	CHERP	ENST00000546361.6	4173	17	87	59	-28	-52	multi-exon	FALSE	canonical	1	232277	junction_9	77688.6661219801	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2751	66	2816	20.0	-16	True	GATAAA	-21
PB.5803.2	chr19	-	4123	17	full-splice_match	CHERP	ENST00000198939.6	4084	17	-33	-6	-33	-1	multi-exon	FALSE	canonical	1	33442	junction_12	110279.07902056945	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2784	71	2854	20.0	-21	True	AATAAA	-20
PB.3179.3	chr13	-	1976	14	novel_in_catalog	NEK3	novel	2072	16	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	1	4615	junction_12	45850.7458433397	NA	1	1	TRUE	NA	NA	NA	C	coding	220	663	246	908	25.0	3	True	ATTAAA	-15
PB.3179.2	chr13	-	2151	16	full-splice_match	NEK3	ENST00000610828.4	2396	16	243	2	-35	0	multi-exon	FALSE	canonical	1	14429	junction_6	37613.957629227654	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	134	1654	20.0	-25	True	ATTAAA	-18
PB.3179.1	chr13	-	2086	15	novel_in_catalog	NEK3	novel	2072	16	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	19327	junction_5	37894.65583781342	NA	1	1	TRUE	NA	NA	NA	C	coding	298	897	118	1014	20.0	-9	True	ATTAAA	-19
PB.10807.1	chr7	+	3746	12	full-splice_match	ING3	ENST00000315870.9	3777	12	27	4	-9	-4	multi-exon	FALSE	canonical	1	140813	junction_5	40291.26503534929	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	122	1378	30.0	-1	True	NA	NA
PB.4895.1	chr17	-	3777	11	novel_not_in_catalog	C17orf75	novel	452	4	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104454.2103352469	NA	5	1	TRUE	NA	NA	NA	C	coding	396	1191	42	1232	25.0	-11	True	AATAAA	-16
PB.4895.3	chr17	-	1646	9	novel_in_catalog	C17orf75	novel	452	4	NA	NA	1	5	intron_retention	FALSE	canonical	1	195069	junction_6	70828.86954263423	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	821	1474	40.0	0	True	AATAAA	-19
PB.4895.2	chr17	-	3110	8	novel_in_catalog	C17orf75	novel	452	4	NA	NA	-2	5	intron_retention	FALSE	canonical	1	204594	junction_6	67794.6932024046	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	2285	2938	40.0	-3	True	AATAAA	-19
PB.4895.4	chr17	-	1393	10	full-splice_match	C17orf75	ENST00000577809.5	1642	10	8	241	8	-7	multi-exon	FALSE	canonical	1	195069	junction_7	67317.76576381676	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	43	1233	35.0	-12	True	AATAAA	-7
PB.1408.2	chr10	+	4636	30	full-splice_match	WASHC2A	ENST00000351071.11	4623	30	-11	-2	8	2	multi-exon	FALSE	canonical	1	2302	junction_9	70202.19984267933	NA	1	NA	TRUE	NA	NA	NA	C	coding	1320	3963	111	4073	20.0	-58	False	NA	NA
PB.1851.9	chr11	-	2803	6	full-splice_match	SPTY2D1	ENST00000336349.5	5754	6	81	2870	-23	-2870	multi-exon	FALSE	canonical	1	139004	junction_5	43176.4668753709	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	156	2213	25.0	-1	True	AATAAA	-20
PB.7324.1	chr20	-	4459	28	full-splice_match	ZNF335	ENST00000322927.2	4430	28	-30	1	-30	-1	multi-exon	TRUE	canonical	1	71905	junction_27	72646.21930092986	NA	30	6	TRUE	NA	NA	NA	A	coding	1342	4029	132	4160	5.0	-20	True	AATAAA	-29
PB.8376.3	chr3	-	1238	8	full-splice_match	MGLL	ENST00000265052.9	4642	8	348	3056	348	-1	multi-exon	FALSE	canonical	1	235058	junction_7	120453.96894469942	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	217	1158	90.0	-20	True	NA	NA
PB.8376.2	chr3	-	1214	8	full-splice_match	MGLL	ENST00000398104.5	4235	8	-35	3056	-35	-1	multi-exon	FALSE	canonical	1	291676	junction_7	103814.76552249104	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	223	1134	90.0	142	False	NA	NA
PB.7436.3	chr21	-	3920	21	novel_in_catalog	FP565260.2	novel	1599	7	NA	NA	-20905	-14576	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	716	2151	71	2221	35.0	NA	False	ATTAAA	-19
PB.8044.10	chr3	-	2607	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	-17	-1210	8	1210	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	162	1073	40.0	-13	True	AAGAAA	-32
PB.8121.7	chr3	-	1678	8	full-splice_match	GMPPB	ENST00000308375.10	3217	8	-36	1575	-36	-23	multi-exon	FALSE	canonical	1	254099	junction_7	34982.373379536526	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	262	1425	30.0	-38	True	NA	NA
PB.3510.1	chr14	-	1504	9	full-splice_match	PLEK2	ENST00000216446.8	1549	9	43	2	10	-2	multi-exon	FALSE	canonical	1	82161	junction_8	48415.663436536735	NA	0	NA	TRUE	NA	NA	NA	A	coding	353	1062	99	1160	15.0	-4	True	AATAAA	-15
PB.8121.6	chr3	-	1603	9	full-splice_match	GMPPB	ENST00000308388.6	1582	9	-44	23	-42	-23	multi-exon	FALSE	canonical	1	254099	junction_8	34857.822099207515	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	268	1350	30.0	661	False	NA	NA
PB.990.6	chr1	-	3926	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	80	2922	80	166	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	115	2901	70.0	69	False	NA	NA
PB.1408.8	chr10	+	5642	30	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	3	0	intron_retention	FALSE	canonical	1	2302	junction_8	70155.3648286613	NA	1	NA	TRUE	NA	NA	NA	C	coding	1254	3765	1677	5441	5.0	-44	False	AATAAA	-13
PB.6274.1	chr19	-	2970	3	full-splice_match	ZNF132	ENST00000254166.3	3031	3	60	1	60	-1	multi-exon	FALSE	canonical	1	21746	junction_2	344.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	706	2121	342	2462	20.0	-10	True	AATAAA	-19
PB.8773.22	chr4	+	4339	11	full-splice_match	DCUN1D4	ENST00000451288.6	4269	11	-70	0	-32	0	multi-exon	FALSE	canonical	1	16397	junction_1	100730.70550735758	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	78	1088	35.0	356	False	AATAAA	-23
PB.2879.11	chr12	-	3756	10	novel_not_in_catalog	CORO1C	novel	3892	11	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_2	391947.16411923576	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	96	1100	25.0	-1	True	GATAAA	-14
PB.2879.10	chr12	-	4082	12	novel_not_in_catalog	CORO1C	novel	3892	11	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_11	471798.7093067383	NA	5	2	TRUE	NA	NA	NA	C	coding	474	1425	368	1792	25.0	-1	True	GATAAA	-14
PB.2879.13	chr12	-	3507	9	novel_in_catalog	CORO1C	novel	3892	11	NA	NA	-1	2	intron_retention	FALSE	canonical	1	695	junction_6	414885.0272876059	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	105	1217	25.0	-10	True	GATAAA	-14
PB.1408.9	chr10	+	4554	30	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	6	1	no_combination_of_known_junctions	FALSE	canonical	1	381	junction_25	70247.06793214234	NA	1	NA	TRUE	NA	NA	NA	C	coding	1300	3903	94	3996	25.0	-41	False	NA	NA
PB.11150.1	chr8	+	2390	3	incomplete-splice_match	CHD7	ENST00000423902.6	11568	38	1	86782	1	122	3prime_fragment	FALSE	canonical	1	59113	junction_1	72415.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	637	1911	479	2389	80.0	-1102	False	ACTAAA	-24
PB.2879.19	chr12	-	2763	3	novel_not_in_catalog	CORO1C	novel	3892	11	NA	NA	4	2	intron_retention	FALSE	non_canonical	0	0	junction_2	652825.5	NA	5	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-5	True	GATAAA	-14
PB.7436.2	chr21	-	3332	22	novel_in_catalog	FP565260.2	novel	1599	7	NA	NA	-20921	-14571	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	734	2205	87	2291	30.0	NA	False	ATTAAA	-24
PB.178.5	chr1	+	2022	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	28	2296	3	2121	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	170	931	25.0	0	True	TATAAA	-20
PB.9440.3	chr5	+	3834	22	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	-33	9205	-33	-5337	3prime_fragment	FALSE	canonical	1	187739	junction_1	90824.73790955929	NA	0	NA	TRUE	NA	NA	NA	C	coding	1138	3414	421	3834	65.0	-363	False	AATGAA	-14
PB.6807.1	chr2	+	1981	8	novel_not_in_catalog	PSMD14	novel	1954	12	NA	NA	-52	3062	any annotated donor/acceptor	FALSE	canonical	1	9309	junction_7	386472.9285815608	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	334	969	40.0	-66	True	ATTAAA	-17
PB.8346.18	chr3	-	2720	9	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-4	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	139162.09763707215	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	322	2283	40.0	460	False	AATAAA	-16
PB.8346.19	chr3	-	3607	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-22	-4	intron_retention	FALSE	canonical	1	41451	junction_9	133281.44052379823	NA	4	NA	TRUE	NA	NA	NA	C	coding	654	1965	121	2085	35.0	-1	True	AATAAA	-15
PB.264.4	chr1	+	4314	9	novel_not_in_catalog	S100PBP	novel	725	3	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	canonical	1	9880	junction_6	111996.96842430322	NA	4	1	TRUE	NA	NA	NA	C	coding	349	1050	174	1223	10.0	-17	False	AATAAA	-20
PB.9906.14	chr6	-	2644	12	novel_not_in_catalog	TAP1	novel	2542	5	NA	NA	102	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	325392.93290679494	NA	18	1	TRUE	NA	NA	NA	C	coding	547	1644	635	2278	10.0	-16	True	AATAAA	-11
PB.264.2	chr1	+	3295	7	full-splice_match	S100PBP	ENST00000373475.9	4322	7	5	1022	3	3	multi-exon	TRUE	canonical	1	109886	junction_1	74642.10594954656	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	250	1476	20.0	5	True	AATAAA	-18
PB.6807.4	chr2	+	1864	8	incomplete-splice_match	PSMD14	ENST00000409682.7	1954	12	400	25156	-23	16442	3prime_fragment	FALSE	canonical	1	719768	junction_1	227919.8806062144	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	305	913	70.0	-37	True	TTTAAA	-22
PB.1129.26	chr1	-	2757	13	novel_in_catalog	EPRS	novel	5014	32	NA	NA	23	-6013	intron_retention	FALSE	canonical	1	605857	junction_5	126968.77719703266	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	120	1478	65.0	164	False	TATAAA	-22
PB.4881.2	chr17	+	2583	7	novel_not_in_catalog	SMURF2P1-LRRC37BP1	novel	1411	9	NA	NA	-6844	0	any annotated donor/acceptor	FALSE	canonical	1	48850	junction_1	65340.10148127514	NA	0	NA	TRUE	NA	NA	NA	B	coding	251	756	631	1386	95.0	-9	True	NA	NA
PB.4881.3	chr17	+	1756	7	novel_not_in_catalog	SMURF2P1-LRRC37BP1	novel	1411	9	NA	NA	-7162	-2	any annotated donor/acceptor	FALSE	canonical	1	48850	junction_1	65340.10148127514	NA	0	NA	TRUE	NA	NA	NA	B	coding	251	756	949	1704	40.0	-10	True	AATAAA	-17
PB.8346.12	chr3	-	3106	12	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	canonical	1	1685	junction_2	168465.05220430242	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	120	2378	40.0	0	True	AATAAA	-17
PB.4881.1	chr17	+	3704	6	novel_not_in_catalog	SMURF2P1-LRRC37BP1	novel	1411	9	NA	NA	-6847	0	intron_retention	FALSE	canonical	1	48850	junction_1	67888.86448129767	NA	1	NA	TRUE	NA	NA	NA	B	coding	137	414	1061	1474	95.0	-12	True	NA	NA
PB.4881.6	chr17	+	2489	7	novel_not_in_catalog	SMURF2P1-LRRC37BP1	novel	1411	9	NA	NA	-6846	0	any annotated donor/acceptor	FALSE	canonical	1	18922	junction_1	73560.4982689985	NA	0	NA	TRUE	NA	NA	NA	B	coding	251	756	537	1292	95.0	-11	True	NA	NA
PB.8346.15	chr3	-	3131	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-28	-3	any annotated donor/acceptor	FALSE	canonical	1	4084	junction_4	151594.21095691615	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	127	1518	40.0	-7	True	AATAAA	-16
PB.4881.4	chr17	+	2762	1	novel_in_catalog	SMURF2P1-LRRC37BP1	novel	1411	9	NA	NA	-7152	23493	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	4	15	452	466	80.0	0	True	AATAAA	-28
PB.4881.5	chr17	+	2602	6	novel_not_in_catalog	SMURF2P1-LRRC37BP1	novel	1411	9	NA	NA	-6893	-5	intron_retention	FALSE	canonical	1	48850	junction_1	67888.86448129767	NA	2	NA	TRUE	NA	NA	NA	B	coding	137	414	1107	1520	40.0	-58	False	AATAAA	-14
PB.8397.11	chr3	+	3211	27	full-splice_match	ATP2C1	ENST00000505330.5	4888	27	171	1506	-17	302	multi-exon	FALSE	canonical	1	81268	junction_1	224764.1897892047	NA	1	1	TRUE	NA	NA	NA	C	coding	953	2862	56	2917	55.0	-3	True	ATTAAA	-31
PB.11501.3	chr9	-	1341	7	full-splice_match	BAG1	ENST00000379704.7	1128	7	-212	-1	-63	0	multi-exon	FALSE	canonical	1	1046680	junction_5	199435.08072441907	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	323	1147	5.0	903	False	AGTAAA	-19
PB.990.8	chr1	-	3045	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	93	3790	93	-702	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	1	NA	TRUE	NA	NA	NA	C	coding	928	2787	102	2888	30.0	-5	True	AATAAA	-35
PB.990.9	chr1	-	2470	14	full-splice_match	FAM129A	ENST00000367511.3	6928	14	-52	4510	-52	-1422	multi-exon	FALSE	canonical	1	194692	junction_13	54523.93337526246	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2223	247	2469	65.0	-63	False	NA	NA
PB.11516.1	chr9	-	4483	17	full-splice_match	VCP	ENST00000358901.10	4370	17	594	-707	-28	707	multi-exon	FALSE	canonical	1	1397368	junction_16	597930.3595088926	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	303	2723	40.0	7388	False	NA	NA
PB.8093.3	chr3	-	1592	13	full-splice_match	UQCRC1	ENST00000203407.5	1985	13	392	1	-9	-1	multi-exon	FALSE	canonical	1	1564577	junction_12	508972.04094813473	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	26	1468	15.0	0	True	AATAAA	-14
PB.1042.6	chr1	-	3336	12	novel_not_in_catalog	KLHL12	novel	3359	12	NA	NA	30	-7	any annotated donor/acceptor	FALSE	canonical	1	332	junction_8	44493.817638888264	NA	7	NA	TRUE	NA	NA	NA	C	coding	578	1737	190	1926	25.0	1	True	ATTAAA	-14
PB.4655.11	chr17	-	2534	9	novel_in_catalog	SMYD4	novel	4384	11	NA	NA	0	325	no_combination_of_known_junctions	FALSE	canonical	1	6063	junction_7	32293.096024682658	NA	2	NA	TRUE	NA	NA	NA	C	coding	699	2100	189	2288	95.0	20	True	NA	NA
PB.4655.10	chr17	-	2700	10	incomplete-splice_match	SMYD4	ENST00000305513.11	4384	11	-21	3300	-21	325	3prime_fragment	FALSE	canonical	1	65874	junction_8	15147.356711100896	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	190	2454	95.0	-1	True	NA	NA
PB.12254.21	chrX	+	4119	33	novel_in_catalog	STAG2	novel	385	4	NA	NA	-27	-19	combination_of_known_junctions	FALSE	canonical	1	30352	junction_1	181059.26063491777	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	138	3833	95.0	9	True	NA	NA
PB.12254.20	chrX	+	4216	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	2	-19	combination_of_known_junctions	FALSE	canonical	1	11896	junction_1	199288.66955347217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	235	3930	95.0	8	True	NA	NA
PB.12254.23	chrX	+	4245	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	19	-19	combination_of_known_junctions	FALSE	canonical	1	30352	junction_1	200238.52283265535	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	153	3959	95.0	-6	True	NA	NA
PB.12254.22	chrX	+	5865	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-6	-178	combination_of_known_junctions	FALSE	canonical	1	30352	junction_1	200238.52283265535	NA	5	1	TRUE	NA	NA	NA	C	coding	1268	3807	178	3984	60.0	0	True	NA	NA
PB.12254.25	chrX	+	5926	35	novel_in_catalog	STAG2	novel	385	4	NA	NA	23	-153	combination_of_known_junctions	FALSE	canonical	1	11896	junction_1	214191.09508265453	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	214	4020	10.0	-2	True	AATAAA	-20
PB.12254.24	chrX	+	5814	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	19	-158	combination_of_known_junctions	FALSE	canonical	1	11896	junction_1	199288.66955347217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	218	3913	10.0	-6	True	AATAAA	-15
PB.1338.1	chr10	+	2302	1	antisense	novelGene_ABI1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11536.11	chr9	-	3051	12	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	29	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	75522.40008344303	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	110	2101	20.0	89	False	AATAAA	-14
PB.6295.5	chr2	-	2258	5	full-splice_match	CMPK2	ENST00000256722.9	2884	5	-15	641	1	-639	multi-exon	FALSE	canonical	1	67158	junction_4	23951.080678906746	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	16	1365	25.0	-48	True	ATTAAA	-18
PB.6295.4	chr2	-	4388	4	full-splice_match	CMPK2	ENST00000404168.1	2042	4	-14	-2332	-14	0	multi-exon	FALSE	canonical	1	67158	junction_3	21054.922295959415	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	109	1260	15.0	-63	True	AATAAA	-22
PB.9062.1	chr4	-	5120	12	full-splice_match	SH3RF1	ENST00000284637.13	5272	12	149	3	-107	-3	multi-exon	FALSE	canonical	1	82739	junction_11	50931.49702888484	NA	2	NA	TRUE	NA	NA	NA	C	coding	888	2667	194	2860	10.0	-7	True	ATTAAA	-19
PB.6295.1	chr2	-	3128	5	full-splice_match	CMPK2	ENST00000256722.9	2884	5	-17	-227	-1	227	multi-exon	FALSE	canonical	1	67158	junction_4	23951.080678906746	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	96	1367	20.0	-50	True	ATTAAA	-16
PB.6295.3	chr2	-	2305	5	full-splice_match	CMPK2	ENST00000478738.5	2417	5	107	5	-17	-5	multi-exon	FALSE	canonical	1	10077	junction_4	47728.81113384242	NA	0	NA	TRUE	NA	NA	NA	C	coding	59	180	599	778	20.0	106	False	AATAAA	-17
PB.6295.2	chr2	-	2922	5	full-splice_match	CMPK2	ENST00000256722.9	2884	5	-41	3	-25	-1	multi-exon	FALSE	canonical	1	67158	junction_4	23951.080678906746	NA	16	NA	TRUE	NA	NA	NA	C	coding	449	1350	42	1391	15.0	897	False	AATAAA	-21
PB.7843.1	chr22	-	3225	11	full-splice_match	PACSIN2	ENST00000263246.7	3249	11	27	-3	17	0	multi-exon	FALSE	canonical	1	444039	junction_8	136292.99208235176	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	176	1636	20.0	-4	True	AATAAA	-22
PB.5044.8	chr17	-	3299	28	full-splice_match	EFTUD2	ENST00000426333.6	4548	28	198	1051	-19	53	multi-exon	FALSE	canonical	1	683139	junction_18	169319.23842899717	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2919	101	3019	25.0	8661	False	NA	NA
PB.7843.3	chr22	-	3262	11	full-splice_match	PACSIN2	ENST00000403744.7	2110	11	4	-1156	4	1	multi-exon	FALSE	canonical	1	4580	junction_10	239751.1906648432	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	219	1679	25.0	246	False	AATAAA	-16
PB.7843.2	chr22	-	3369	11	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	7050	0	any annotated donor/acceptor	FALSE	canonical	1	19274	junction_10	235951.5237213144	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	320	1780	20.0	7051	False	AATAAA	-22
PB.1342.9	chr10	-	3769	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	9	78	9	-78	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	174	2324	35.0	0	True	AATAGA	-14
PB.1342.8	chr10	-	3744	18	full-splice_match	YME1L1	ENST00000613434.4	4127	18	37	346	9	-4	multi-exon	FALSE	canonical	1	46877	junction_15	340376.61223523214	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	174	2225	35.0	0	True	ATTAAA	-19
PB.9443.5	chr5	-	4208	10	full-splice_match	SEPT8	ENST00000296873.11	4394	10	182	4	-1	0	multi-exon	FALSE	canonical	1	135973	junction_9	257193.2184667472	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	103	1392	5.0	-1	True	ATTAAA	-17
PB.9443.4	chr5	-	4568	9	novel_in_catalog	SEPT8	novel	2889	10	NA	NA	-7	0	intron_retention	FALSE	canonical	1	135973	junction_8	263748.74195692263	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	976	1752	5.0	2811	False	ATTAAA	-17
PB.1342.4	chr10	-	3474	16	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	9	-1	intron_retention	FALSE	canonical	1	8618	junction_14	360867.75842335005	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	174	1952	25.0	0	True	ATTAAA	-22
PB.1342.7	chr10	-	3765	18	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	-8	-4	intron_retention	FALSE	canonical	1	12004	junction_2	352578.9136592178	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	170	2038	35.0	4	True	ATTAAA	-19
PB.1342.6	chr10	-	4051	20	full-splice_match	YME1L1	ENST00000326799.7	3994	20	-61	4	0	-4	multi-exon	FALSE	canonical	1	14391	junction_17	401858.0501320366	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	211	2532	35.0	1563	False	ATTAAA	-19
PB.1342.1	chr10	-	4127	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	9	-280	9	-62	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	174	2324	30.0	0	True	TATAAA	-24
PB.7914.14	chr3	+	2947	10	novel_not_in_catalog	THUMPD3	novel	2877	10	NA	NA	15	110	any annotated donor/acceptor	FALSE	canonical	1	16242	junction_1	128493.51225511085	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	300	1823	25.0	8	True	NA	NA
PB.1342.3	chr10	-	4009	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	19	-172	-2	-170	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	164	2314	20.0	10	True	NA	NA
PB.1342.2	chr10	-	4047	20	novel_not_in_catalog	YME1L1	novel	4127	18	NA	NA	1	-61	intron_retention	FALSE	non_canonical	0	0	junction_19	339373.95363739866	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	93	2243	30.0	-13	True	TATAAA	-25
PB.2565.23	chr12	-	4133	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	94	661	0	-369	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	367	1872	15.0	-1	True	ATTAAA	-20
PB.2565.20	chr12	-	4385	15	full-splice_match	SLC38A2	ENST00000549258.5	4384	15	-2	1	0	-1	multi-exon	FALSE	canonical	1	94002	junction_12	604265.2309954163	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	536	1756	40.0	-1	True	AATAAA	-21
PB.7914.15	chr3	+	4339	10	full-splice_match	THUMPD3	ENST00000515662.6	2390	10	-30	-1919	16	-2	multi-exon	FALSE	canonical	1	7377	junction_1	130762.06839348789	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	715	2238	40.0	9	True	AATAAA	-19
PB.2565.26	chr12	-	2762	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	94	2032	0	739	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	367	1872	45.0	-1	True	AATAAA	-21
PB.2565.27	chr12	-	2476	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	36	2376	36	395	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	425	1930	45.0	-32	False	AATAAA	-18
PB.2565.24	chr12	-	3596	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	94	1198	0	-2	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	367	1872	25.0	-1	True	ATTAAA	-18
PB.2565.25	chr12	-	3378	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	93	1417	-1	-221	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	3	NA	TRUE	NA	NA	NA	C	coding	501	1506	368	1873	55.0	-2	True	ATTAAA	-35
PB.7914.12	chr3	+	3296	10	novel_not_in_catalog	THUMPD3	novel	2877	10	NA	NA	13	2	any annotated donor/acceptor	FALSE	canonical	1	10321	junction_1	130006.46679366699	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	757	2280	25.0	6	True	ATTAAA	-24
PB.2565.28	chr12	-	1945	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	94	2849	0	73	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	367	1872	20.0	-1	True	AGTAAA	-22
PB.10198.3	chr6	-	4807	3	incomplete-splice_match	HDDC2	ENST00000398153.6	918	6	-7	18380	-7	3221	3prime_fragment	FALSE	canonical	1	563219	junction_2	119936.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	108	327	51	377	30.0	-32	True	NA	NA
PB.10198.2	chr6	-	5694	3	incomplete-splice_match	HDDC2	ENST00000398153.6	918	6	10	17476	-7	4125	3prime_fragment	FALSE	canonical	1	563219	junction_2	119936.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	108	327	34	360	70.0	-15	True	AATAAA	-17
PB.10198.1	chr6	-	973	6	full-splice_match	HDDC2	ENST00000398153.6	918	6	-55	0	42	0	multi-exon	FALSE	canonical	1	563219	junction_5	287928.7403751143	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	99	713	50.0	-80	False	AATAAA	-17
PB.7914.13	chr3	+	1703	10	full-splice_match	THUMPD3	ENST00000452837.6	2877	10	224	950	14	92	multi-exon	FALSE	canonical	1	135218	junction_1	100595.78608801994	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	116	1639	65.0	7	True	CATAAA	-15
PB.9421.9	chr5	+	2619	12	novel_not_in_catalog	LMNB1	novel	3475	12	NA	NA	2	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	322012.8042585104	NA	5	NA	TRUE	NA	NA	NA	C	coding	586	1761	112	1872	30.0	3	True	AATAAA	-11
PB.1430.11	chr10	-	5959	14	novel_in_catalog	JMJD1C	novel	7901	23	NA	NA	73	-8	combination_of_known_junctions	FALSE	canonical	1	104403	junction_12	94883.82043775379	NA	0	NA	TRUE	NA	NA	NA	C	coding	1803	5409	550	5958	70.0	249	False	AAAAAG	-10
PB.1430.10	chr10	-	6071	16	novel_in_catalog	JMJD1C	novel	7901	23	NA	NA	-59	-8	combination_of_known_junctions	FALSE	canonical	1	38145	junction_15	115517.84408506862	NA	2	NA	TRUE	NA	NA	NA	C	coding	1840	5520	551	6070	70.0	-20	True	AAAAAG	-10
PB.1430.13	chr10	-	4984	10	novel_in_catalog	JMJD1C	novel	7901	23	NA	NA	-67	8727	combination_of_known_junctions	FALSE	canonical	1	38145	junction_9	106580.6386163854	NA	1	NA	TRUE	NA	NA	NA	C	coding	1475	4425	559	4983	65.0	-28	True	AAAAAG	-17
PB.1430.12	chr10	-	5220	9	incomplete-splice_match	JMJD1C	ENST00000542921.5	8149	25	-177	39107	10	8727	3prime_fragment	FALSE	canonical	1	135611	junction_7	83238.29987902203	NA	0	NA	TRUE	NA	NA	NA	C	coding	1438	4314	906	5219	65.0	-1	True	AAAAAG	-17
PB.1430.15	chr10	-	5068	8	novel_in_catalog	JMJD1C	novel	7901	23	NA	NA	-32	8705	combination_of_known_junctions	FALSE	canonical	1	104403	junction_6	88759.61927335549	NA	0	NA	TRUE	NA	NA	NA	C	coding	1431	4293	776	5068	60.0	-6	True	ACTAAA	-22
PB.1430.14	chr10	-	4846	9	novel_not_in_catalog	JMJD1C	novel	7901	23	NA	NA	-53	8705	any annotated donor/acceptor	FALSE	canonical	1	34802	junction_4	103964.08897118935	NA	6	NA	TRUE	NA	NA	NA	C	coding	1362	4086	761	4846	60.0	-14	True	ACTAAA	-22
PB.1430.17	chr10	-	4937	9	novel_not_in_catalog	JMJD1C	novel	7901	23	NA	NA	10	8440	any annotated donor/acceptor	FALSE	canonical	1	34802	junction_4	83646.8774640415	NA	1	NA	TRUE	NA	NA	NA	C	coding	1273	3819	1117	4935	60.0	-1	True	AAAAAG	-30
PB.1430.16	chr10	-	4685	10	novel_in_catalog	JMJD1C	novel	7901	23	NA	NA	-55	8440	combination_of_known_junctions	FALSE	canonical	1	38145	junction_9	106580.6386163854	NA	1	NA	TRUE	NA	NA	NA	C	coding	1379	4137	547	4683	60.0	-16	True	AAAAAG	-30
PB.9421.7	chr5	+	2951	12	full-splice_match	LMNB1	ENST00000460265.5	3475	12	528	-4	-2	-2	multi-exon	FALSE	canonical	1	6171	junction_5	411201.14727189054	NA	3	NA	TRUE	NA	NA	NA	C	coding	329	990	359	1348	25.0	-9	True	AATAAA	-18
PB.5842.1	chr19	+	1655	17	full-splice_match	SSBP4	ENST00000348495.10	1721	17	65	1	-25	-1	multi-exon	TRUE	canonical	1	51338	junction_2	127576.59644056733	NA	0	NA	TRUE	NA	NA	NA	A	coding	363	1092	249	1340	15.0	-1	True	AATAAA	-25
PB.9421.5	chr5	+	2504	11	full-splice_match	LMNB1	ENST00000261366.9	2878	11	-18	392	-18	57	multi-exon	FALSE	canonical	1	664182	junction_1	147664.127379672	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	380	2140	30.0	-30	True	AATAAA	-37
PB.1709.8	chr10	-	2944	12	novel_in_catalog	DHX32	novel	2389	8	NA	NA	-71	-172	combination_of_known_junctions	FALSE	canonical	1	39230	junction_11	91190.43432100152	NA	0	NA	TRUE	NA	NA	NA	B	coding	743	2232	538	2769	30.0	-24	True	AATAAA	-26
PB.6001.15	chr19	-	3121	15	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	21896	junction_1	315793.90214057075	NA	11	1	TRUE	NA	NA	NA	C	coding	537	1614	267	1880	20.0	77	False	AATAAA	-15
PB.5943.2	chr19	+	4717	32	novel_not_in_catalog	WDR62	novel	1980	10	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	5526	junction_8	41175.710710111984	NA	3	1	TRUE	NA	NA	NA	C	coding	1518	4557	83	4639	10.0	-23	True	AATAAA	-16
PB.5943.3	chr19	+	4710	32	full-splice_match	WDR62	ENST00000270301.11	4632	32	-75	-3	16	0	multi-exon	TRUE	canonical	1	30505	junction_26	39890.95219703666	NA	0	NA	TRUE	NA	NA	NA	C	coding	1518	4557	76	4632	10.0	-16	True	AATAAA	-16
PB.5943.1	chr19	+	4732	32	full-splice_match	WDR62	ENST00000401500.6	4682	32	-47	-3	9	0	multi-exon	FALSE	canonical	1	67139	junction_1	36496.95514099766	NA	2	2	TRUE	NA	NA	NA	C	coding	1523	4572	83	4654	10.0	-23	True	AATAAA	-16
PB.1709.2	chr10	-	3405	13	novel_not_in_catalog	DHX32	novel	2389	8	NA	NA	-48	0	any annotated donor/acceptor	FALSE	canonical	1	32785	junction_12	102567.71885225661	NA	0	NA	TRUE	NA	NA	NA	B	coding	743	2232	827	3058	25.0	-1	True	AATAAA	-17
PB.1709.3	chr10	-	3302	13	novel_not_in_catalog	DHX32	novel	2389	8	NA	NA	-59	0	any annotated donor/acceptor	FALSE	canonical	1	830	junction_12	108601.87683163752	NA	2	NA	TRUE	NA	NA	NA	B	coding	743	2232	724	2955	25.0	-12	True	AATAAA	-17
PB.1709.1	chr10	-	3057	12	novel_not_in_catalog	DHX32	novel	2389	8	NA	NA	-59	3	any annotated donor/acceptor	FALSE	canonical	1	802	junction_11	100371.39000443048	NA	1	NA	TRUE	NA	NA	NA	B	coding	743	2232	473	2704	20.0	-12	True	AATAAA	-23
PB.1709.6	chr10	-	3147	13	novel_not_in_catalog	DHX32	novel	2389	8	NA	NA	-55	-1	any annotated donor/acceptor	FALSE	canonical	1	1573	junction_11	116193.10847129542	NA	1	NA	TRUE	NA	NA	NA	B	coding	743	2232	570	2801	25.0	-8	True	AATAAA	-16
PB.1709.7	chr10	-	3255	13	novel_not_in_catalog	DHX32	novel	2389	8	NA	NA	-68	-170	any annotated donor/acceptor	FALSE	canonical	1	32785	junction_12	102567.71885225661	NA	0	NA	TRUE	NA	NA	NA	B	coding	743	2232	847	3078	25.0	-21	True	AATAAA	-28
PB.1709.4	chr10	-	3251	12	novel_not_in_catalog	DHX32	novel	2389	8	NA	NA	-59	0	any annotated donor/acceptor	FALSE	canonical	1	7610	junction_5	117640.22043101522	NA	0	NA	TRUE	NA	NA	NA	B	coding	792	2379	526	2904	25.0	-12	True	AATAAA	-17
PB.1709.5	chr10	-	3084	12	novel_in_catalog	DHX32	novel	2389	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	39230	junction_11	91190.43432100152	NA	0	NA	TRUE	NA	NA	NA	B	coding	743	2232	506	2737	25.0	8	True	AATAAA	-17
PB.6289.6	chr2	+	1916	13	novel_not_in_catalog	TRAPPC12	novel	2483	12	NA	NA	25	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	154986.38796544806	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	498	1808	0.0	-6	True	AATAAA	-17
PB.6289.7	chr2	+	2450	12	full-splice_match	TRAPPC12	ENST00000324266.9	2508	12	61	-3	27	-2	multi-exon	FALSE	canonical	1	160886	junction_1	128743.70053278736	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	135	2342	0.0	-4	True	AATAAA	-17
PB.6289.4	chr2	+	2687	7	novel_not_in_catalog	TRAPPC12	novel	2483	12	NA	NA	9	-4250	any annotated donor/acceptor	FALSE	canonical	1	3774	junction_6	114391.61596851794	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	187	1740	10.0	-27	True	AATAAA	-14
PB.6289.5	chr2	+	3782	9	novel_not_in_catalog	TRAPPC12	novel	2483	12	NA	NA	8	1653	any annotated donor/acceptor	FALSE	canonical	1	12767	junction_8	96710.52448859625	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	154	1890	40.0	6	True	AATAAA	-20
PB.9453.8	chr5	-	2206	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	50	2393	-19	909	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	232	1161	40.0	-22	True	AATAAA	-25
PB.9421.1	chr5	+	2261	11	full-splice_match	LMNB1	ENST00000261366.9	2878	11	-71	688	-71	-239	multi-exon	TRUE	canonical	1	664182	junction_1	147664.127379672	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	433	2193	40.0	2	True	AATAAA	-41
PB.2951.8	chr12	+	2071	4	full-splice_match	GATC	ENST00000551765.5	4244	4	18	2155	12	1250	multi-exon	FALSE	canonical	1	184234	junction_3	49482.598169008415	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	26	436	35.0	12	True	AATAAA	-43
PB.2951.9	chr12	+	2558	5	full-splice_match	GATC	ENST00000548171.1	931	5	15	-1642	15	1642	multi-exon	FALSE	canonical	1	10866	junction_3	106964.7212530842	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	23	388	75.0	15	True	NA	NA
PB.2951.6	chr12	+	2161	5	novel_not_in_catalog	AL021546.1	novel	552	5	NA	NA	8258	1890	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	115646.84764267248	NA	1	NA	TRUE	NA	NA	NA	B	coding	136	411	26	436	75.0	12	True	NA	NA
PB.2951.7	chr12	+	2148	5	novel_not_in_catalog	AL021546.1	novel	552	5	NA	NA	8258	1980	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	115646.84764267248	NA	0	NA	TRUE	NA	NA	NA	B	coding	136	411	26	436	75.0	12	True	NA	NA
PB.2951.4	chr12	+	2459	4	full-splice_match	GATC	ENST00000551765.5	4244	4	22	1763	16	1642	multi-exon	FALSE	canonical	1	184234	junction_3	49482.598169008415	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	22	432	75.0	16	True	NA	NA
PB.5044.7	chr17	-	4371	26	novel_in_catalog	EFTUD2	novel	4548	28	NA	NA	-3	5	intron_retention	FALSE	canonical	1	683139	junction_16	158960.18742779086	NA	2	NA	TRUE	NA	NA	NA	C	coding	584	1755	71	1825	0.0	-32	True	NA	NA
PB.2951.2	chr12	+	3718	6	novel_not_in_catalog	AL021546.1	novel	552	5	NA	NA	8246	3733	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	106277.67469492358	NA	15	NA	TRUE	NA	NA	NA	B	coding	121	366	38	403	60.0	0	True	AATAAA	-8
PB.2951.3	chr12	+	2660	4	full-splice_match	GATC	ENST00000551765.5	4244	4	6	1578	0	-1578	multi-exon	FALSE	canonical	1	184234	junction_3	49482.598169008415	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	38	448	75.0	0	True	GATAAA	-32
PB.5878.3	chr19	+	2587	5	full-splice_match	ZNF431	ENST00000311048.11	13894	5	-24	11331	-8	630	multi-exon	FALSE	canonical	1	52394	junction_3	17266.689627357642	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	169	1899	40.0	-50	False	TATAAA	-8
PB.5878.2	chr19	+	2635	5	novel_not_in_catalog	ZNF431	novel	1971	6	NA	NA	-10	726	any annotated donor/acceptor	FALSE	canonical	1	6545	junction_1	31805.006386573797	NA	3	NA	TRUE	NA	NA	NA	C	coding	514	1545	307	1851	40.0	-52	False	AATAAA	-38
PB.11435.2	chr9	+	2779	7	full-splice_match	CDC37L1	ENST00000381854.3	3502	7	-6	729	1	-729	multi-exon	FALSE	canonical	1	169991	junction_5	36229.74162204307	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	209	1222	15.0	-37	True	AATAAA	-22
PB.8561.1	chr3	-	1429	9	novel_not_in_catalog	ALG3	novel	1452	8	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	265874.266549529	NA	0	NA	TRUE	NA	NA	NA	B	coding	438	1317	23	1339	25.0	-1	True	AATAAA	-15
PB.11435.1	chr9	+	1663	7	full-splice_match	CDC37L1	ENST00000381854.3	3502	7	-17	1856	-10	-1856	multi-exon	FALSE	canonical	1	169991	junction_5	36229.74162204307	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	220	1233	25.0	-148	False	ATTAAA	-29
PB.11435.4	chr9	+	5936	5	incomplete-splice_match	CDC37L1	ENST00000381858.5	1244	7	29	320	22	-320	intron_retention	FALSE	canonical	1	187664	junction_1	35265.66165106647	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	181	1092	100.0	-9	True	NA	NA
PB.395.2	chr1	-	2911	2	intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3373	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-20
PB.6361.1	chr2	+	2792	3	incomplete-splice_match	GAREM2	ENST00000407684.1	5138	6	4358	-5	-158	5	intron_retention	FALSE	canonical	1	30631	junction_1	10376.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	11	36	1365	1400	25.0	35	False	AATAAA	-19
PB.8552.20	chr3	+	2218	8	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	3	-11	combination_of_known_junctions	FALSE	canonical	1	14880	junction_1	75993.43103136196	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	235	2037	50.0	15	True	AATAAA	-16
PB.9062.5	chr4	-	4720	12	full-splice_match	SH3RF1	ENST00000284637.13	5272	12	62	490	62	-490	multi-exon	FALSE	canonical	1	82739	junction_11	50931.49702888484	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	281	2947	60.0	6	True	TTTAAA	-38
PB.11848.2	chr9	-	1517	9	full-splice_match	C9orf78	ENST00000372447.7	1795	9	-19	297	-13	-297	multi-exon	FALSE	canonical	1	802341	junction_3	295816.1560389958	NA	3	NA	TRUE	NA	NA	NA	C	coding	289	870	74	943	25.0	10	False	ATTAAA	-11
PB.11848.3	chr9	-	1293	9	full-splice_match	C9orf78	ENST00000372447.7	1795	9	-15	517	-9	161	multi-exon	FALSE	canonical	1	802341	junction_3	295816.1560389958	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	70	939	100.0	14	False	NA	NA
PB.11848.1	chr9	-	1799	9	full-splice_match	C9orf78	ENST00000372447.7	1795	9	-6	2	0	-2	multi-exon	FALSE	canonical	1	802341	junction_3	295816.1560389958	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	61	930	25.0	-7	True	ATTAAA	-16
PB.4387.3	chr16	+	2484	6	novel_in_catalog	HSD3B7	novel	2200	6	NA	NA	32	0	intron_retention	FALSE	canonical	1	126118	junction_4	33984.66835854074	NA	0	NA	TRUE	NA	NA	NA	B	coding	369	1110	412	1521	10.0	1	True	ATTAAA	-14
PB.4387.2	chr16	+	2179	7	novel_not_in_catalog	HSD3B7	novel	2200	6	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	canonical	1	10704	junction_1	65075.03887820583	NA	0	NA	TRUE	NA	NA	NA	B	coding	369	1110	102	1211	10.0	-22	True	ATTAAA	-19
PB.4387.1	chr16	+	2349	7	novel_not_in_catalog	HSD3B7	novel	2200	6	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	20251	junction_1	61970.647249098685	NA	1	NA	TRUE	NA	NA	NA	B	coding	369	1110	277	1386	10.0	-24	True	ATTAAA	-14
PB.395.4	chr1	-	3016	3	intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2786	junction_2	666.5	NA	0	NA	FALSE	NA	NA	NA	A	coding	137	414	388	801	30.0	18	True	AATAAA	-19
PB.8049.2	chr3	+	5124	6	full-splice_match	SNRK	ENST00000429705.6	5128	6	0	4	0	1	multi-exon	FALSE	canonical	1	29752	junction_1	80165.43651574536	NA	1	NA	TRUE	NA	NA	NA	C	coding	765	2298	245	2542	15.0	-48	True	AATAAA	-25
PB.8049.3	chr3	+	5164	7	full-splice_match	SNRK	ENST00000296088.11	5183	7	16	3	16	-3	multi-exon	FALSE	canonical	1	88767	junction_1	60775.18447433039	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	289	2586	30.0	-30	True	AATAAA	-21
PB.8049.1	chr3	+	5253	8	full-splice_match	SNRK	ENST00000454177.5	2961	8	10	-2302	10	2	multi-exon	FALSE	canonical	1	14228	junction_2	91315.72323202481	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	373	2670	20.0	-104	False	AATAAA	-26
PB.8632.4	chr3	-	2323	10	novel_not_in_catalog	MELTF	novel	806	2	NA	NA	1	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	46191.14850752733	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	114	1472	20.0	-30	True	AATAAA	-42
PB.5685.1	chr19	+	2034	1	antisense	novelGene_ZNF121_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	1182	False	NA	NA
PB.11226.34	chr8	-	2525	16	full-splice_match	NBN	ENST00000265433.7	4666	16	45	2096	-6	0	multi-exon	FALSE	canonical	1	198817	junction_14	118152.53893110662	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	111	2375	30.0	-5	True	AATAAA	-16
PB.9808.1	chr6	+	2194	5	full-splice_match	PRSS16	ENST00000468138.5	962	5	-98	-1134	-66	0	multi-exon	FALSE	canonical	1	146398	junction_1	50186.56806606724	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-5	True	NA	NA
PB.8632.5	chr3	-	2298	15	novel_not_in_catalog	MELTF	novel	3963	16	NA	NA	1	-2996	any annotated donor/acceptor	FALSE	canonical	1	2438	junction_1	41938.45409237402	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	114	2126	20.0	-30	True	NA	NA
PB.11226.33	chr8	-	2541	17	incomplete-splice_match	NBN	ENST00000396252.6	4907	19	18605	2082	-4	14	5prime_fragment	FALSE	canonical	1	46834	junction_15	160483.18357030238	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	359	2377	20.0	43	True	AATAAA	-30
PB.8632.2	chr3	-	2701	13	novel_not_in_catalog	MELTF	novel	806	2	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45071.98797687428	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	116	1945	20.0	-32	True	AATAAA	-42
PB.11226.38	chr8	-	4200	14	novel_in_catalog	NBN	novel	4666	16	NA	NA	-2	0	intron_retention	FALSE	canonical	1	213812	junction_13	109089.92077436033	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	2239	4050	30.0	-1	True	AATAAA	-16
PB.11138.11	chr8	+	3415	13	full-splice_match	LYN	ENST00000519728.5	2297	13	16	-1134	-6	1134	multi-exon	FALSE	canonical	1	341846	junction_2	156622.7227620875	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	281	1819	20.0	-6	True	GATAAA	-25
PB.3732.1	chr15	+	1794	1	novel_in_catalog	AC124312.1	novel	1325	8	NA	NA	26961	-16488	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.10061.6	chr6	+	2285	12	novel_in_catalog	MTO1	novel	2837	13	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	1	19294	junction_1	68733.17202194547	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	64	1920	30.0	0	True	ATTAAA	-19
PB.10061.7	chr6	+	2683	13	novel_in_catalog	MTO1	novel	2837	13	NA	NA	-4	-1	no_combination_of_known_junctions	FALSE	canonical	1	5011	junction_8	91543.48166748714	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	118	1416	25.0	1	True	ATTAAA	-14
PB.10061.4	chr6	+	2804	12	novel_in_catalog	MTO1	novel	2837	13	NA	NA	-5	5	intron_retention	FALSE	canonical	1	61870	junction_6	60430.02828570884	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	119	1279	30.0	0	True	ATTAAA	-20
PB.10061.5	chr6	+	2402	11	novel_in_catalog	MTO1	novel	2837	13	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	1	18584	junction_10	71659.69593495356	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	119	1888	30.0	0	True	ATTAAA	-20
PB.10061.2	chr6	+	4011	12	full-splice_match	MTO1	ENST00000498286.5	10857	12	159	6687	-5	1097	multi-exon	FALSE	canonical	1	157893	junction_1	33263.251669121375	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	119	2197	50.0	0	True	ATTAAA	-10
PB.10061.3	chr6	+	3733	12	novel_in_catalog	MTO1	novel	2837	13	NA	NA	-5	1096	combination_of_known_junctions	FALSE	canonical	1	19294	junction_1	68733.17202194547	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	64	1920	50.0	0	True	ATTAAA	-9
PB.11398.4	chr8	+	2236	14	novel_in_catalog	HSF1	novel	2105	13	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	72567	junction_9	403951.98099834245	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	168	1841	5.0	-14	True	TATAAA	-22
PB.10061.1	chr6	+	2392	12	full-splice_match	MTO1	ENST00000498286.5	10857	12	149	8316	-15	-3	multi-exon	FALSE	canonical	1	157893	junction_1	33263.251669121375	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	129	2207	30.0	-10	True	NA	NA
PB.670.1	chr1	-	2607	8	novel_in_catalog	NBPF20	novel	18760	138	NA	NA	80650	-106	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	B	coding	269	810	278	1087	15.0	NA	False	ATTAAA	-15
PB.11421.3	chr9	-	1854	16	novel_in_catalog	CBWD1	novel	1706	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	2111	junction_15	165063.41743059442	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	120	839	25.0	NA	False	AATAAA	-15
PB.670.2	chr1	-	1493	13	incomplete-splice_match	NBPF20	ENST00000369373.9	18760	138	49620	56485	47356	-54885	internal_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	10	2	TRUE	NA	NA	NA	B	coding	411	1233	259	1491	60.0	NA	False	AAGAAA	-18
PB.11421.5	chr9	-	1328	15	full-splice_match	CBWD1	ENST00000356521.8	1706	15	5	373	-1	0	multi-exon	FALSE	canonical	1	2111	junction_14	166209.59738639323	NA	2	2	TRUE	NA	NA	NA	C	coding	395	1188	85	1272	30.0	NA	False	AATAAA	-18
PB.11421.4	chr2	+	1570	14	full-splice_match	CBWD2	ENST00000416503.6	1665	14	43	52	-11	0	multi-exon	FALSE	canonical	1	6351	junction_9	145928.20853281807	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	64	1194	35.0	NA	False	ATTAAA	-13
PB.10061.8	chr6	+	2517	12	full-splice_match	MTO1	ENST00000498286.5	10857	12	205	8135	5	5	multi-exon	FALSE	canonical	1	157893	junction_1	33263.251669121375	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	73	2151	30.0	0	True	ATTAAA	-20
PB.10061.9	chr6	+	2753	12	novel_in_catalog	MTO1	novel	2837	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	32686	junction_7	80765.5273091228	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	109	1269	25.0	10	True	AATAAA	-28
PB.5036.21	chr17	-	1675	14	incomplete-splice_match	UBTF	ENST00000527034.5	3010	20	-37	3589	-37	-748	3prime_fragment	FALSE	canonical	1	112785	junction_13	221585.63287668483	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1455	220	1674	55.0	-13	True	NA	NA
PB.11218.2	chr8	+	3572	25	full-splice_match	WWP1	ENST00000517970.5	4686	25	7	1107	7	-80	multi-exon	FALSE	canonical	1	48261	junction_24	72587.2607153964	NA	1	NA	TRUE	NA	NA	NA	C	coding	922	2769	301	3069	65.0	7	True	NA	NA
PB.11627.15	chr9	-	3852	24	novel_in_catalog	AGTPBP1	novel	4208	26	NA	NA	-55	-21231	combination_of_known_junctions	FALSE	canonical	1	13326	junction_20	77265.54090805774	NA	3	1	TRUE	NA	NA	NA	C	coding	1050	3153	493	3645	15.0	-18	True	AATAAA	-15
PB.11749.1	chr9	-	2633	8	novel_in_catalog	ASTN2	novel	4747	23	NA	NA	-8	616	intron_retention	FALSE	canonical	1	33289	junction_7	36472.831028935856	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	216	1391	80.0	-13	True	NA	NA
PB.8799.2	chr4	-	2247	4	full-splice_match	IGFBP7	ENST00000514062.2	1251	4	-38	-958	-38	-307	multi-exon	FALSE	canonical	1	5809868	junction_2	307229.49485613446	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	325	912	40.0	495	False	AATAAA	-15
PB.1432.12	chr10	-	3729	25	full-splice_match	HERC4	ENST00000373700.8	3905	25	0	176	0	-176	multi-exon	FALSE	canonical	1	203129	junction_24	72770.27286432465	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	314	3463	35.0	-1	True	AATAAA	-42
PB.1432.11	chr10	-	3878	26	full-splice_match	HERC4	ENST00000395198.7	4445	26	-14	581	4	0	multi-exon	FALSE	canonical	1	8331	junction_10	111488.67167567473	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	263	3436	25.0	-15	True	AATAAA	-16
PB.8799.1	chr4	-	1120	5	full-splice_match	IGFBP7	ENST00000295666.6	1427	5	0	307	0	-307	multi-exon	FALSE	canonical	1	5809868	junction_3	266382.22556729923	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	35	883	40.0	-1	True	AATAAA	-15
PB.1432.14	chr10	-	2149	16	incomplete-splice_match	HERC4	ENST00000373700.8	3905	25	138	44146	47	-1843	3prime_fragment	FALSE	canonical	1	203129	junction_15	59348.41449856376	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	176	2125	70.0	-10	True	NA	NA
PB.3291.4	chr14	-	1707	7	full-splice_match	PIP4P1	ENST00000398020.6	1696	7	-12	1	-12	-1	multi-exon	FALSE	canonical	1	152525	junction_6	141905.3443755144	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	153	1007	20.0	-1	True	AATAAA	-16
PB.3291.5	chr14	-	1691	7	full-splice_match	PIP4P1	ENST00000250489.8	1961	7	130	140	-17	-1	multi-exon	FALSE	canonical	1	214704	junction_6	120904.29087838676	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	158	991	20.0	-6	False	AATAAA	-16
PB.3291.2	chr14	-	2847	4	novel_in_catalog	PIP4P1	novel	1961	7	NA	NA	24	-1	intron_retention	FALSE	canonical	1	430494	junction_2	38678.020221079336	NA	1	NA	TRUE	NA	NA	NA	C	coding	149	450	117	566	20.0	-8	True	AATAAA	-16
PB.4397.1	chr16	+	1819	11	full-splice_match	TGFB1I1	ENST00000394863.7	1898	11	80	-1	-2	1	multi-exon	FALSE	canonical	1	188931	junction_1	87527.76479060801	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	51	1436	10.0	-16	True	CATAAA	-19
PB.4397.2	chr16	+	2092	10	novel_in_catalog	TGFB1I1	novel	573	7	NA	NA	4	1	intron_retention	FALSE	canonical	1	188931	junction_1	92262.34695384733	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	29	1099	10.0	6	True	CATAAA	-19
PB.3291.1	chr14	-	3585	1	novel_in_catalog	PIP4P1	novel	1961	7	NA	NA	22	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	149	450	119	568	20.0	-10	True	AATAAA	-16
PB.7981.21	chr3	-	2476	15	incomplete-splice_match	TOP2B	ENST00000264331.8	5358	36	-544	30991	-9	-1839	3prime_fragment	FALSE	canonical	1	57332	junction_14	186452.71696047735	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1857	620	2476	70.0	-10	True	NA	NA
PB.5109.1	chr17	-	2747	7	full-splice_match	LRRC59	ENST00000225972.7	2910	7	162	1	113	-1	multi-exon	FALSE	canonical	1	1344550	junction_5	295450.7301223092	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	75	998	5.0	108	False	ATTAAA	-16
PB.7981.23	chr3	-	3890	1	novel_in_catalog	TOP2B	novel	3525	27	NA	NA	0	-33961	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.5109.3	chr17	-	1446	7	full-splice_match	LRRC59	ENST00000225972.7	2910	7	28	1436	-21	-1436	multi-exon	FALSE	canonical	1	1344550	junction_5	295450.7301223092	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	209	1132	25.0	-26	True	TATAAA	-15
PB.5109.4	chr17	-	4509	1	full-splice_match	LRRC59	ENST00000576448.1	1531	1	-25	-2953	24	2953	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-30	True	NA	NA
PB.11621.16	chr9	-	2241	11	full-splice_match	UBQLN1	ENST00000376395.8	4118	11	429	1448	160	18	multi-exon	FALSE	canonical	1	863295	junction_9	174628.50651279703	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	96	1865	30.0	469	False	AATAAA	-33
PB.11621.15	chr9	-	2364	10	full-splice_match	UBQLN1	ENST00000257468.11	2299	10	-46	-19	-46	19	multi-exon	FALSE	canonical	1	190469	junction_3	343206.3244114246	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	302	1987	25.0	263	False	AATAAA	-34
PB.3190.5	chr13	+	2727	11	novel_in_catalog	BORA	novel	2936	12	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	1	9908	junction_3	54118.71101753995	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	738	1742	10.0	-8	True	AATAAA	-21
PB.8589.17	chr3	+	4401	8	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1171	junction_1	290497.3403583332	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	433	1653	15.0	0	True	AATAAA	-18
PB.7328.4	chr20	-	1866	10	full-splice_match	SLC35C2	ENST00000372230.9	2246	10	-33	413	-24	-411	multi-exon	FALSE	canonical	1	214279	junction_9	166682.79474128527	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	316	1413	10.0	-31	True	AATAAA	-20
PB.3190.6	chr13	+	1911	11	full-splice_match	BORA	ENST00000377815.4	1673	11	-7	-231	-7	231	multi-exon	FALSE	canonical	1	17782	junction_2	50455.551165357414	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	211	1680	25.0	-7	True	AATAAA	-13
PB.3749.10	chr15	-	2027	3	incomplete-splice_match	FMN1	ENST00000559047.5	4260	18	84	290697	84	-581	3prime_fragment	FALSE	canonical	1	12040	junction_2	8281.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1776	250	2025	65.0	-4	True	NA	NA
PB.10308.8	chr6	+	2721	19	novel_not_in_catalog	SYTL3	novel	2692	16	NA	NA	10	2	any annotated donor/acceptor	FALSE	canonical	1	9691	junction_4	36004.135356448045	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	622	2454	30.0	-30	True	AATAAA	-17
PB.3190.7	chr13	+	1968	11	novel_in_catalog	BORA	novel	2936	12	NA	NA	0	234	combination_of_known_junctions	FALSE	canonical	1	9908	junction_3	54118.71101753995	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	730	1734	30.0	0	True	AATAAA	-16
PB.2549.5	chr12	+	3356	11	novel_not_in_catalog	MUC19	novel	24829	173	NA	NA	2296	0	intron_retention	FALSE	canonical	1	204	junction_8	6228.009650763236	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-75	False	AATAAA	-23
PB.2549.4	chr12	+	3228	11	novel_not_in_catalog	MUC19	novel	24829	173	NA	NA	2289	0	intron_retention	FALSE	canonical	1	1342	junction_8	6022.08999351554	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-82	False	AATAAA	-23
PB.10308.1	chr6	+	3147	18	novel_not_in_catalog	SYTL3	novel	2692	16	NA	NA	-5092	2	intron_retention	FALSE	canonical	1	2793	junction_4	38963.344981296046	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	1666	2880	30.0	-9148	False	AATAAA	-17
PB.2549.1	chr12	+	3396	12	novel_not_in_catalog	MUC19	novel	24829	173	NA	NA	2248	-2	intron_retention	TRUE	canonical	1	204	junction_9	6036.899295784055	NA	1	NA	TRUE	NA	NA	NA	B	coding	152	459	2314	2772	30.0	-123	False	AATAAA	-16
PB.10308.7	chr6	+	2800	17	novel_in_catalog	SYTL3	novel	2692	16	NA	NA	1	2	intron_retention	FALSE	canonical	1	859	junction_1	35149.17939098117	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	701	2533	30.0	-39	True	AATAAA	-17
PB.2549.3	chr12	+	3159	8	novel_not_in_catalog	MUC19	novel	24829	173	NA	NA	2270	-2706	intron_retention	FALSE	canonical	1	6744	junction_2	3944.86047967246	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.3190.1	chr13	+	1888	10	novel_in_catalog	BORA	novel	2936	12	NA	NA	-10	232	no_combination_of_known_junctions	TRUE	canonical	1	15736	junction_2	53306.1272680823	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	130	1656	30.0	-56	False	AATAAA	-14
PB.3190.2	chr13	+	2038	12	full-splice_match	BORA	ENST00000390667.9	2936	12	150	748	-5	234	multi-exon	FALSE	canonical	1	65913	junction_2	43150.150047334	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	125	1804	30.0	-51	False	AATAAA	-16
PB.7599.11	chr22	+	3084	6	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-15	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	95130.05683799417	NA	7	NA	TRUE	NA	NA	NA	C	coding	305	918	385	1302	40.0	-5	True	ATTAAA	-17
PB.7599.10	chr22	+	1903	4	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-18	2	intron_retention	FALSE	non_canonical	0	0	junction_3	92909.65650924917	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	388	867	45.0	-8	True	ATTAAA	-23
PB.7599.13	chr22	+	2262	5	full-splice_match	PEX26	ENST00000610387.4	3924	5	79	1583	-9	976	multi-exon	FALSE	canonical	1	67303	junction_4	64784.76182714574	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	131	901	30.0	1	True	AATAAA	-35
PB.3190.3	chr13	+	2671	11	full-splice_match	BORA	ENST00000377815.4	1673	11	-19	-979	0	-3	multi-exon	FALSE	canonical	1	17782	junction_2	50455.551165357414	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	223	1692	10.0	0	True	AATAAA	-15
PB.11909.2	chr9	-	1792	5	novel_in_catalog	AGPAT2	novel	1391	5	NA	NA	5	-1	intron_retention	FALSE	canonical	1	618278	junction_4	139463.02168406505	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	669	1184	10.0	-10	True	TATAAA	-18
PB.7599.14	chr22	+	2311	5	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-150	-3343	any annotated donor/acceptor	FALSE	canonical	1	2309	junction_4	94465.37794709498	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	151	975	25.0	229	False	NA	NA
PB.11909.1	chr9	-	1562	6	full-splice_match	AGPAT2	ENST00000371696.6	1512	6	-50	0	-50	0	multi-exon	FALSE	canonical	1	618278	junction_5	129084.10248609238	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	117	953	15.0	-32	True	TATAAA	-19
PB.5115.7	chr17	+	3409	10	full-splice_match	LUC7L3	ENST00000505658.5	7040	10	59	3572	0	56	multi-exon	FALSE	canonical	1	1154226	junction_1	381832.49189286015	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	131	1429	25.0	0	True	AATAAA	-22
PB.5115.6	chr17	+	1936	13	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	54062	junction_12	784624.5531682078	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	140	1549	35.0	-9	True	ATTAAA	-14
PB.5115.5	chr17	+	1980	11	full-splice_match	LUC7L3	ENST00000240304.5	1972	11	-8	0	-2	0	multi-exon	FALSE	canonical	1	639631	junction_10	505973.46267428884	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	139	1437	30.0	-8	True	AATAAA	-14
PB.5115.4	chr17	+	3517	12	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	11	54	intron_retention	FALSE	canonical	1	96147	junction_3	787869.8956250527	NA	3	NA	TRUE	NA	NA	NA	C	coding	413	1242	574	1815	25.0	-22	False	AATAAA	-20
PB.5115.3	chr17	+	3636	11	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	142956	junction_10	723954.1501471002	NA	2	NA	TRUE	NA	NA	NA	C	coding	387	1164	164	1327	30.0	-33	False	AATAAA	-14
PB.5115.2	chr17	+	3701	12	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	0	54	intron_retention	FALSE	canonical	1	56389	junction_3	843215.60641654	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	653	1723	25.0	-38	False	AATAAA	-20
PB.5115.1	chr17	+	2318	11	full-splice_match	LUC7L3	ENST00000393227.6	2284	11	-35	1	-1	-1	multi-exon	FALSE	canonical	1	441475	junction_10	549129.704155776	NA	4	1	TRUE	NA	NA	NA	C	coding	489	1470	170	1639	25.0	-39	False	AATAAA	-12
PB.731.15	chr1	-	3020	21	novel_in_catalog	ARNT	novel	4887	22	NA	NA	11	405	no_combination_of_known_junctions	FALSE	canonical	1	21065	junction_11	112216.87748278999	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	32	2275	30.0	-3	True	AATAAA	-18
PB.731.16	chr1	-	2587	22	novel_in_catalog	ARNT	novel	4887	22	NA	NA	11	-139	combination_of_known_junctions	FALSE	canonical	1	21065	junction_12	93680.479315902	NA	1	1	TRUE	NA	NA	NA	C	coding	784	2355	32	2386	20.0	-3	True	AAGAAA	-15
PB.5115.9	chr17	+	3247	11	novel_not_in_catalog	LUC7L3	novel	7040	10	NA	NA	0	2	intron_retention	FALSE	canonical	1	5456	junction_8	700655.852783633	NA	4	2	TRUE	NA	NA	NA	C	coding	333	1002	137	1138	30.0	-6	True	ATTAAA	-21
PB.5115.8	chr17	+	3216	11	full-splice_match	LUC7L3	ENST00000393227.6	2284	11	5	-937	1	4	multi-exon	FALSE	canonical	1	441475	junction_10	549129.704155776	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	130	1599	25.0	1	True	ATTAAA	-23
PB.909.2	chr1	+	2794	3	full-splice_match	MPZL1	ENST00000392121.7	3421	3	-32	659	7	-659	multi-exon	FALSE	canonical	1	25829	junction_2	107154.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	196	555	30.0	-25	True	AATAAA	-21
PB.909.3	chr1	+	3881	6	full-splice_match	MPZL1	ENST00000359523.6	5010	6	29	1100	-5	0	multi-exon	FALSE	canonical	1	191137	junction_2	43579.65952872968	NA	5	NA	TRUE	NA	NA	NA	C	coding	269	810	174	983	15.0	-3	True	AATACA	-15
PB.909.1	chr1	+	3653	4	novel_in_catalog	MPZL1	novel	420	3	NA	NA	-11	2	no_combination_of_known_junctions	FALSE	canonical	1	4113	junction_1	121609.8033447779	NA	9	NA	TRUE	NA	NA	NA	C	coding	147	444	3075	3518	15.0	-43	False	AATACA	-17
PB.909.6	chr1	+	3226	6	full-splice_match	MPZL1	ENST00000359523.6	5010	6	29	1755	-5	-655	multi-exon	FALSE	canonical	1	191137	junction_2	43579.65952872968	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	174	983	25.0	-3	True	AATAAA	-25
PB.8589.15	chr3	+	4341	8	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-41	0	no_combination_of_known_junctions	FALSE	canonical	1	156	junction_1	290722.0410231977	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	373	1593	15.0	-2	True	AATAAA	-18
PB.909.4	chr1	+	3130	5	full-splice_match	MPZL1	ENST00000474859.5	630	5	-180	-2320	-12	-655	multi-exon	FALSE	canonical	1	149442	junction_4	56863.05869587038	NA	3	NA	TRUE	NA	NA	NA	C	coding	209	630	181	810	25.0	-10	True	AATAAA	-25
PB.909.5	chr1	+	4528	3	full-splice_match	MPZL1	ENST00000392121.7	3421	3	-10	-1097	-5	-3	multi-exon	FALSE	canonical	1	25829	junction_2	107154.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	119	360	174	533	30.0	-3	True	NA	NA
PB.12348.8	chrX	+	1770	9	full-splice_match	TAZ	ENST00000613002.4	1485	9	-1	-284	-1	1	multi-exon	FALSE	canonical	1	77209	junction_5	146718.3050855874	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	305	1051	15.0	-6	True	CATAAA	-23
PB.909.8	chr1	+	3750	5	full-splice_match	MPZL1	ENST00000474859.5	630	5	-143	-2977	16	2	multi-exon	FALSE	canonical	1	149442	junction_4	56863.05869587038	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	144	773	15.0	27	True	AATACA	-17
PB.10858.2	chr7	+	3937	14	novel_in_catalog	CALD1	novel	1915	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	97495	junction_13	563765.5654839762	NA	3	1	TRUE	NA	NA	NA	C	coding	547	1644	246	1889	25.0	0	True	AATAAA	-17
PB.10858.3	chr7	+	4228	15	novel_in_catalog	CALD1	novel	1915	14	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	105300	junction_5	512814.3372469022	NA	2	NA	TRUE	NA	NA	NA	C	coding	564	1695	242	1936	25.0	4	True	AATAAA	-17
PB.10858.1	chr7	+	4154	14	full-splice_match	CALD1	ENST00000361901.6	4114	14	-44	4	0	-4	multi-exon	FALSE	canonical	1	1356685	junction_5	182561.0204895271	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	246	1862	25.0	0	True	AATAAA	-17
PB.10858.6	chr7	+	3972	12	full-splice_match	CALD1	ENST00000424922.5	2124	12	-69	-1779	-69	-3	multi-exon	FALSE	canonical	1	274921	junction_1	441792.1192845872	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	81	1679	25.0	-5	True	AATAAA	-18
PB.10858.7	chr7	+	2224	12	full-splice_match	CALD1	ENST00000424922.5	2124	12	-169	69	-17	67	multi-exon	FALSE	canonical	1	274921	junction_1	441792.1192845872	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	181	1779	30.0	-17	True	AATAAA	-22
PB.10858.4	chr7	+	2503	12	full-splice_match	CALD1	ENST00000424922.5	2124	12	-92	-287	60	-200	multi-exon	FALSE	canonical	1	274921	junction_1	441792.1192845872	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	104	1702	65.0	0	True	NA	NA
PB.10858.5	chr7	+	3756	12	novel_in_catalog	CALD1	novel	1915	14	NA	NA	-68	-4	combination_of_known_junctions	FALSE	canonical	1	97495	junction_11	606725.2152015266	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	80	1708	25.0	-4	True	AATAAA	-17
PB.7206.10	chr20	+	4037	6	full-splice_match	GZF1	ENST00000338121.9	4835	6	0	798	0	-780	multi-exon	FALSE	canonical	1	49432	junction_1	36344.36588853904	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	78	2213	25.0	0	True	AATAAA	-32
PB.7206.11	chr20	+	3936	5	novel_in_catalog	GZF1	novel	4835	6	NA	NA	1	-785	combination_of_known_junctions	FALSE	canonical	1	12438	junction_2	52925.87679717739	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	77	1444	35.0	1	True	AATAAA	-27
PB.10858.8	chr7	+	4119	13	full-splice_match	CALD1	ENST00000393118.6	4281	13	71	91	13	-4	multi-exon	FALSE	canonical	1	105300	junction_3	645062.3364378352	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	151	1827	25.0	13	True	AATAAA	-17
PB.788.1	chr1	+	2688	3	full-splice_match	CKS1B	ENST00000308987.5	759	3	-35	-1894	11	1894	multi-exon	FALSE	canonical	1	753	junction_2	36193.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	NA	NA
PB.2220.1	chr11	-	4043	11	full-splice_match	SLC36A4	ENST00000326402.8	6012	11	-4	1973	-3	-1973	multi-exon	FALSE	canonical	1	91556	junction_10	30144.12120944978	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	136	1650	35.0	7	True	AATAAA	-39
PB.3359.3	chr14	-	1710	3	full-splice_match	CBLN3	ENST00000555436.1	718	3	-51	-941	-51	-132	multi-exon	FALSE	canonical	1	4548	junction_2	78562.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	121	585	30.0	-1338	False	AATAAA	-16
PB.2220.3	chr11	-	2115	11	full-splice_match	SLC36A4	ENST00000326402.8	6012	11	-12	3909	-11	68	multi-exon	FALSE	canonical	1	91556	junction_10	30144.12120944978	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	144	1658	65.0	-1	True	AGTAAA	-16
PB.2220.2	chr11	-	2508	11	full-splice_match	SLC36A4	ENST00000326402.8	6012	11	-12	3516	-11	461	multi-exon	FALSE	canonical	1	91556	junction_10	30144.12120944978	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	144	1658	30.0	-1	True	NA	NA
PB.2220.4	chr11	-	1891	11	full-splice_match	SLC36A4	ENST00000326402.8	6012	11	-23	4144	-22	0	multi-exon	FALSE	canonical	1	91556	junction_10	30144.12120944978	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	155	1669	70.0	-12	True	NA	NA
PB.3359.2	chr14	-	1719	3	full-splice_match	CBLN3	ENST00000267406.10	2346	3	494	133	494	-133	multi-exon	FALSE	canonical	1	92993	junction_2	34340.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	62	189	407	595	30.0	636	False	AATAAA	-15
PB.8348.2	chr3	+	3981	12	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	240	16456	-1	-6584	3prime_fragment	FALSE	canonical	1	220702	junction_1	75111.15661845439	NA	0	NA	TRUE	NA	NA	NA	C	coding	1318	3954	27	3980	60.0	-1	True	NA	NA
PB.2555.6	chr12	+	1950	12	novel_in_catalog	IRAK4	novel	1409	10	NA	NA	0	346	combination_of_known_junctions	FALSE	canonical	1	21502	junction_1	64153.94162635954	NA	6	2	TRUE	NA	NA	NA	C	coding	336	1011	334	1344	35.0	-1	True	AATAAA	-23
PB.2555.7	chr12	+	3322	14	novel_not_in_catalog	IRAK4	novel	1409	10	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	69659.42971164406	NA	6	2	TRUE	NA	NA	NA	C	coding	460	1383	107	1489	20.0	0	True	ATTAAA	-16
PB.2555.4	chr12	+	2837	12	full-splice_match	IRAK4	ENST00000613694.4	4280	12	-4	1447	0	1119	multi-exon	FALSE	canonical	1	41963	junction_1	57153.06197996701	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	76	1458	30.0	-17	True	NA	NA
PB.2555.5	chr12	+	3281	13	novel_not_in_catalog	IRAK4	novel	1409	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	66775.73112057628	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	66	1448	20.0	-7	True	ATTAAA	-16
PB.2555.2	chr12	+	2888	13	full-splice_match	IRAK4	ENST00000551736.5	1684	13	-13	-1191	-2	1119	multi-exon	FALSE	canonical	1	21502	junction_1	63044.29368766367	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	127	1509	30.0	-20	True	NA	NA
PB.2555.3	chr12	+	2742	12	novel_in_catalog	IRAK4	novel	1409	10	NA	NA	-2	1119	combination_of_known_junctions	FALSE	canonical	1	21502	junction_1	64153.94162635954	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	353	1363	30.0	-20	True	NA	NA
PB.2555.1	chr12	+	2763	11	full-splice_match	IRAK4	ENST00000550615.5	1348	11	-71	-1344	-65	1119	multi-exon	FALSE	canonical	1	41963	junction_1	57040.2403234769	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	374	1384	30.0	-89	False	NA	NA
PB.11274.24	chr8	-	2542	16	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_8	1973368.5736341253	NA	6	1	TRUE	NA	NA	NA	C	coding	612	1839	505	2343	80.0	-1	True	NA	NA
PB.765.8	chr1	-	1907	12	novel_in_catalog	ILF2	novel	1906	14	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1632815	junction_9	1085093.5637994427	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	71	898	0.0	-6	True	ATTAAA	-16
PB.11625.21	chr9	-	2746	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-9	18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	851338.187976534	NA	4	1	TRUE	NA	NA	NA	B	coding	221	666	910	1575	20.0	-27	True	AATAAA	-19
PB.2555.8	chr12	+	3176	13	novel_not_in_catalog	IRAK4	novel	1409	10	NA	NA	2	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	71568.92076678411	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	332	1342	25.0	1	True	ATTAAA	-17
PB.2555.9	chr12	+	2921	14	full-splice_match	IRAK4	ENST00000550386.5	1751	14	8	-1178	2	1106	multi-exon	FALSE	canonical	1	7780	junction_3	71417.62123904568	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	545	1555	30.0	1	True	NA	NA
PB.7595.15	chr22	+	3296	7	novel_not_in_catalog	BCL2L13	novel	999	5	NA	NA	0	81	any annotated donor/acceptor	FALSE	canonical	1	17899	junction_6	128269.53536823673	NA	3	NA	TRUE	NA	NA	NA	C	coding	338	1017	593	1609	40.0	0	True	AATAAA	-32
PB.7595.14	chr22	+	4721	7	full-splice_match	BCL2L13	ENST00000317582.9	2992	7	167	-1896	0	-5	multi-exon	FALSE	canonical	1	240760	junction_1	38131.62492676591	NA	2	NA	TRUE	NA	NA	NA	C	coding	485	1458	181	1638	20.0	0	True	AATAAA	-14
PB.7595.17	chr22	+	2999	5	novel_in_catalog	BCL2L13	novel	999	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	8255	junction_1	153469.59180465524	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	426	1397	40.0	0	True	AATAAA	-25
PB.7595.16	chr22	+	3069	6	full-splice_match	BCL2L13	ENST00000618481.4	4961	6	173	1719	0	-4	multi-exon	FALSE	canonical	1	8255	junction_1	122843.84804881357	NA	4	NA	TRUE	NA	NA	NA	C	coding	386	1161	307	1467	40.0	0	True	AATAAA	-25
PB.7595.11	chr22	+	4578	6	novel_not_in_catalog	BCL2L13	novel	999	5	NA	NA	5	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	121345.96215515373	NA	24	2	TRUE	NA	NA	NA	C	coding	386	1161	335	1495	20.0	-11	True	AATAAA	-14
PB.7595.10	chr22	+	2813	7	full-splice_match	BCL2L13	ENST00000317582.9	2992	7	157	22	6	0	multi-exon	FALSE	canonical	1	240760	junction_1	38131.62492676591	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	191	1648	70.0	-10	True	AATAGA	-21
PB.7595.13	chr22	+	2946	5	novel_in_catalog	BCL2L13	novel	999	5	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	1	12048	junction_3	136971.37160621377	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	727	1344	40.0	-7	True	AATAAA	-25
PB.7595.12	chr22	+	3130	6	novel_in_catalog	BCL2L13	novel	999	5	NA	NA	-3	81	combination_of_known_junctions	FALSE	canonical	1	17899	junction_5	112610.9836728194	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	130	1443	40.0	-3	True	AATAAA	-32
PB.12216.1	chrX	+	6539	51	full-splice_match	COL4A5	ENST00000361603.7	6427	51	-119	7	-39	-3	multi-exon	TRUE	canonical	1	77345	junction_41	35086.788984824474	NA	1	NA	TRUE	NA	NA	NA	A	coding	1685	5058	322	5379	20.0	-33	True	ATTAAA	-12
PB.11274.27	chr8	-	4790	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	1799488	junction_8	1702365.7493842342	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	3452	4696	80.0	-2	True	AAAACA	-5
PB.7595.19	chr22	+	3629	7	full-splice_match	BCL2L13	ENST00000317582.9	2992	7	170	-807	3	388	multi-exon	FALSE	canonical	1	240760	junction_1	38131.62492676591	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	178	1635	25.0	3	True	AATAAA	-20
PB.7595.18	chr22	+	2084	5	incomplete-splice_match	BCL2L13	ENST00000418951.6	5062	6	173	27095	0	27	3prime_fragment	FALSE	canonical	1	56168	junction_4	107445.58021243825	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	181	612	60.0	0	True	AATAAA	-22
PB.6477.31	chr2	-	2832	28	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	5	262	any annotated donor/acceptor	FALSE	canonical	1	1389	junction_19	74501.46562283603	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	1225	2703	35.0	-3	True	TATAAA	-22
PB.6477.30	chr2	-	3345	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	1	262	intron_retention	FALSE	canonical	1	59518	junction_19	61406.879526125536	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	1738	3216	35.0	-7	True	TATAAA	-22
PB.6477.33	chr2	-	2417	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	-2	261	no_combination_of_known_junctions	FALSE	canonical	1	9686	junction_5	73152.8556637729	NA	2	NA	TRUE	NA	NA	NA	C	coding	755	2268	22	2289	35.0	-10	True	TATAAA	-21
PB.6477.32	chr2	-	2442	27	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	5	262	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	92780.14269403472	NA	8	2	TRUE	NA	NA	NA	C	coding	531	1596	251	1846	35.0	-3	True	TATAAA	-22
PB.3609.9	chr14	-	2477	7	novel_in_catalog	FOXN3	novel	513	3	NA	NA	-47	-230	combination_of_known_junctions	FALSE	canonical	1	29723	junction_6	65316.079711788174	NA	3	NA	TRUE	NA	NA	NA	B	coding	464	1395	299	1693	30.0	-32	True	ATTAAA	-23
PB.3609.8	chr14	-	2509	6	novel_not_in_catalog	FOXN3	novel	513	3	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	74817.89715836712	NA	11	NA	TRUE	NA	NA	NA	B	coding	464	1395	102	1496	80.0	-32	True	NA	NA
PB.3609.5	chr14	-	2709	7	novel_in_catalog	FOXN3	novel	513	3	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	1	29723	junction_6	65316.079711788174	NA	1	NA	TRUE	NA	NA	NA	B	coding	464	1395	301	1695	85.0	-34	True	NA	NA
PB.12375.1	chrX	-	4188	2	full-splice_match	P2RY8	ENST00000381297.9	4198	2	-47	57	-47	-57	multi-exon	FALSE	canonical	1	2753	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	259	1338	80.0	48	False	NA	NA
PB.12375.2	chrX	-	2830	1	incomplete-splice_match	P2RY8	ENST00000381297.9	4198	2	71649	57	28895	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	113	342	2	343	80.0	9952	False	NA	NA
PB.8523.4	chr3	-	3985	5	full-splice_match	NCEH1	ENST00000475381.5	4687	5	41	661	41	-265	multi-exon	FALSE	canonical	1	158311	junction_4	30089.86244048816	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	98	1420	50.0	2	True	TATAAA	-35
PB.3609.1	chr14	-	3002	8	novel_in_catalog	FOXN3	novel	513	3	NA	NA	-27	210	combination_of_known_junctions	FALSE	canonical	1	29723	junction_7	62517.08253863785	NA	3	NA	TRUE	NA	NA	NA	B	coding	486	1461	279	1739	80.0	-12	True	NA	NA
PB.8523.2	chr3	-	4179	5	full-splice_match	NCEH1	ENST00000538775.5	4315	5	128	8	22	-8	multi-exon	FALSE	canonical	1	9492	junction_3	87046.62003920658	NA	4	NA	TRUE	NA	NA	NA	C	coding	448	1347	11	1357	5.0	-26	True	AATAAA	-20
PB.3609.3	chr14	-	2843	9	novel_not_in_catalog	FOXN3	novel	513	3	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	56	junction_7	70894.12308847875	NA	12	2	TRUE	NA	NA	NA	B	coding	486	1461	369	1829	85.0	1	True	NA	NA
PB.3609.2	chr14	-	2965	7	novel_in_catalog	FOXN3	novel	513	3	NA	NA	-56	210	combination_of_known_junctions	FALSE	canonical	1	29723	junction_6	65316.079711788174	NA	2	NA	TRUE	NA	NA	NA	B	coding	464	1395	308	1702	80.0	-41	True	NA	NA
PB.11218.4	chr8	+	3691	24	novel_in_catalog	WWP1	novel	4686	25	NA	NA	-105	20	no_combination_of_known_junctions	FALSE	canonical	1	31997	junction_1	76892.07688417211	NA	2	NA	TRUE	NA	NA	NA	C	coding	922	2769	320	3088	45.0	-196	False	AATAAA	-32
PB.3451.10	chr14	+	2167	2	full-splice_match	SOCS4	ENST00000395472.2	6779	2	12	4600	-6	-1820	multi-exon	FALSE	canonical	1	85773	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	321	1643	30.0	6	True	AGTAAA	-30
PB.3451.11	chr14	+	2503	2	full-splice_match	SOCS4	ENST00000395472.2	6779	2	13	4263	-5	-1483	multi-exon	FALSE	canonical	1	85773	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	320	1642	5.0	7	True	ACTAAA	-13
PB.4389.1	chr16	+	1392	11	full-splice_match	STX4	ENST00000313843.7	1481	11	56	33	0	6	multi-exon	FALSE	canonical	1	536304	junction_3	113980.08428510658	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	260	1153	85.0	-11	True	NA	NA
PB.4389.2	chr16	+	1514	10	novel_in_catalog	STX4	novel	571	7	NA	NA	4	6	intron_retention	FALSE	canonical	1	550197	junction_1	109391.73203381518	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	616	1275	85.0	3	True	NA	NA
PB.10862.1	chr7	+	2578	1	intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-67	False	NA	NA
PB.3788.1	chr15	+	3893	5	full-splice_match	VPS18	ENST00000220509.9	3895	5	2	0	2	0	multi-exon	FALSE	canonical	1	185940	junction_1	25020.85282694217	NA	0	NA	TRUE	NA	NA	NA	A	coding	973	2922	338	3259	5.0	9	True	ATTAAA	-15
PB.4482.1	chr16	-	2697	2	full-splice_match	B3GNT9	ENST00000449549.3	2917	2	235	-15	235	15	multi-exon	FALSE	canonical	1	36941	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	302	1510	30.0	-18	True	ATTAAA	-30
PB.4482.3	chr16	-	2024	5	novel_in_catalog	TRADD	novel	1877	5	NA	NA	-10	-8	combination_of_known_junctions	FALSE	canonical	1	27250	junction_3	84311.55716448369	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	805	1563	40.0	-10	True	NA	NA
PB.4482.2	chr16	-	2633	2	novel_in_catalog	B3GNT9	novel	2917	2	NA	NA	-8693	-4	no_combination_of_known_junctions	FALSE	canonical	1	985	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	257	1465	25.0	-9	True	ATTAAA	-11
PB.4482.4	chr16	-	1477	5	full-splice_match	TRADD	ENST00000345057.8	1877	5	390	10	-10	9	multi-exon	FALSE	canonical	1	155283	junction_3	29379.260894166484	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	80	1018	45.0	-10	True	NA	NA
PB.9591.1	chr5	+	3082	6	full-splice_match	NIPAL4	ENST00000311946.7	3274	6	194	-2	-3	2	multi-exon	FALSE	canonical	1	15007	junction_2	11996.759895905227	NA	0	NA	TRUE	NA	NA	NA	A	coding	404	1215	109	1323	15.0	0	True	AATAAA	-21
PB.8026.10	chr3	-	2939	9	full-splice_match	GORASP1	ENST00000319283.7	3722	9	733	50	0	-41	multi-exon	FALSE	canonical	1	129017	junction_8	60212.82114716101	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	90	1412	75.0	-4	True	NA	NA
PB.7305.5	chr20	+	2117	5	full-splice_match	TTPAL	ENST00000262605.8	6212	5	-2	4097	-2	670	multi-exon	FALSE	canonical	1	63449	junction_1	15890.173929192846	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	124	1152	15.0	7	True	NA	NA
PB.11896.1	chr9	-	3140	1	incomplete-splice_match	NACC2	ENST00000371753.5	6802	5	40902	2	9802	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	98	297	2	298	15.0	NA	False	AATAAA	-15
PB.848.10	chr1	+	1820	4	full-splice_match	PEA15	ENST00000360472.8	2471	4	48	603	5	-603	multi-exon	FALSE	canonical	1	1933448	junction_1	651201.4241159695	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	141	533	60.0	1	True	AAAAAG	-12
PB.848.11	chr1	+	2270	5	novel_not_in_catalog	PEA15	novel	2471	4	NA	NA	9	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1315336.9365090453	NA	7	NA	TRUE	NA	NA	NA	C	coding	130	393	137	529	45.0	5	True	AATAAA	-18
PB.848.12	chr1	+	2709	6	full-splice_match	PEA15	ENST00000368076.1	2694	6	-18	3	-18	-3	multi-exon	FALSE	canonical	1	14853	junction_1	1550297.772272798	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	367	822	35.0	-9867	False	AATAAA	-22
PB.8089.1	chr3	+	380	4	full-splice_match	TMA7	ENST00000438607.2	561	4	1	180	1	-175	multi-exon	FALSE	canonical	1	324074	junction_3	293057.8161402437	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	1	True	AATAAA	-8
PB.11780.11	chr9	+	3756	2	incomplete-splice_match	NEK6	ENST00000320246.9	3447	10	-22	47754	-15	-20852	3prime_fragment	FALSE	canonical	1	180815	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-3	True	NA	NA
PB.11780.10	chr9	+	2553	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	3	891	3	-22	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	143	1084	40.0	22	True	AATAAA	-19
PB.8397.18	chr3	+	4628	28	full-splice_match	ATP2C1	ENST00000508532.5	4969	28	298	43	-93	0	multi-exon	FALSE	canonical	1	32044	junction_1	242080.2703752739	NA	14	1	TRUE	NA	NA	NA	C	coding	919	2760	112	2871	35.0	-297	False	AATAAA	-16
PB.7305.7	chr20	+	2857	6	novel_not_in_catalog	TTPAL	novel	6212	5	NA	NA	2	-740	any annotated donor/acceptor	FALSE	canonical	1	1538	junction_3	40969.40100416407	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	118	678	100.0	13	True	NA	NA
PB.12155.8	chrX	-	1665	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	11405	junction_1	211871.8711070443	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	26	1033	30.0	-5	True	AATAAA	-13
PB.12155.9	chrX	-	3270	10	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	284882.9292066445	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	15	932	25.0	6	True	AATAAA	-12
PB.9927.1	chr6	+	2372	10	incomplete-splice_match	KIFC1	ENST00000428849.6	2706	11	270	2834	-55	0	3prime_fragment	FALSE	canonical	1	331079	junction_1	117065.95160321139	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	181	2205	75.0	-53	True	TTTAAA	-36
PB.11625.18	chr9	-	2745	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	7	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	3	1	TRUE	NA	NA	NA	B	coding	457	1374	199	1572	15.0	355	False	AATAAA	-21
PB.2993.12	chr12	-	4061	23	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	61150	junction_22	50074.0001624249	NA	0	NA	TRUE	NA	NA	NA	C	coding	1141	3426	230	3655	40.0	-5	True	AATAAA	-17
PB.2993.13	chr12	-	3539	22	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-7	7	combination_of_known_junctions	FALSE	canonical	1	32240	junction_20	52517.04135903484	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2970	530	3499	35.0	-3	True	ATTAAA	-24
PB.2993.10	chr12	-	4144	24	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	18997	junction_22	53554.657517763946	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	388	3738	40.0	-6	True	AATAAA	-17
PB.2993.11	chr12	-	4122	24	novel_in_catalog	MPHOSPH9	novel	856	6	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	12641	junction_20	61628.229509076766	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2970	747	3716	40.0	-2	True	AATAAA	-17
PB.9863.1	chr6	+	2658	1	genic	TCF19	novel	NA	NA	NA	NA	-46	-1854	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	106	321	1096	1416	90.0	-93	False	NA	NA
PB.12155.1	chrX	-	3494	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	6	1	TRUE	NA	NA	NA	C	coding	335	1008	22	1029	25.0	-1	True	AATAAA	-14
PB.2993.14	chr12	-	2208	12	novel_in_catalog	MPHOSPH9	novel	6136	22	NA	NA	-5	-9	combination_of_known_junctions	FALSE	canonical	1	61150	junction_11	46768.46289403869	NA	1	NA	TRUE	NA	NA	NA	C	coding	661	1983	226	2208	65.0	-1	True	AAGAAA	-15
PB.12155.3	chrX	-	3886	10	full-splice_match	MAGT1	ENST00000610432.4	4019	10	133	0	-4	0	multi-exon	FALSE	canonical	1	431665	junction_5	107994.9962127304	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	26	1033	30.0	-5	True	AATAAA	-13
PB.11568.1	chr9	+	2304	4	novel_not_in_catalog	FAM27C	novel	616	2	NA	NA	-31	118776	intron_retention	TRUE	non_canonical	0	0	junction_1	6059.6054326993935	NA	2	NA	FALSE	NA	NA	NA	A	coding	129	390	15	404	30.0	NA	False	NA	NA
PB.11568.3	chr9	+	2532	2	novel_not_in_catalog	AL391987.3	novel	492	2	NA	NA	-12189	18878	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	9	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.11568.2	chr9	+	2284	3	novel_not_in_catalog	AL391987.3	novel	492	2	NA	NA	-12215	67729	any annotated donor/acceptor	FALSE	canonical	1	2776	junction_2	5189.5	NA	2	NA	FALSE	NA	NA	NA	B	coding	157	474	24	497	40.0	NA	False	NA	NA
PB.11568.4	chr9	+	2758	3	novel_not_in_catalog	AL391987.3	novel	492	2	NA	NA	-12168	38122	any annotated donor/acceptor	FALSE	canonical	1	352	junction_2	6401.5	NA	7	NA	FALSE	NA	NA	NA	B	coding	143	432	1	432	20.0	NA	False	ATTAAA	-27
PB.11568.6	chr9	+	1722	2	novel_not_in_catalog	CR769775.1	novel	931	3	NA	NA	-14	427	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.5319.15	chr17	-	1859	6	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	391	junction_1	13360307.616493318	NA	1	1	TRUE	NA	NA	NA	C	coding	332	999	293	1291	20.0	-3	True	AATAAA	-16
PB.5319.14	chr17	-	1864	6	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	391	junction_1	13847682.936310917	NA	1	1	TRUE	NA	NA	NA	C	coding	350	1053	76	1128	20.0	-4	True	AATAAA	-16
PB.5319.11	chr17	-	2008	5	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	17727597	junction_2	8715864.301391758	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	293	1291	20.0	-3	True	AATAAA	-16
PB.5319.10	chr17	-	2005	5	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	17727597	junction_1	9277216.510462351	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	68	1120	20.0	1962	False	AATAAA	-16
PB.5319.13	chr17	-	1890	7	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	391	junction_1	14674685.5224854	NA	1	1	TRUE	NA	NA	NA	C	coding	375	1128	195	1322	20.0	-4	True	AATAAA	-16
PB.5319.12	chr17	-	1947	7	novel_in_catalog	ACTG1	novel	1919	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	391	junction_1	16278234.911420222	NA	2	1	TRUE	NA	NA	NA	C	coding	253	762	618	1379	20.0	-3	True	AATAAA	-16
PB.3615.6	chr14	+	2618	14	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	29837	junction_6	114524.31365827698	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	286	2100	25.0	7	True	NA	NA
PB.3615.7	chr14	+	2609	14	full-splice_match	DGLUCY	ENST00000428926.6	2538	14	-72	1	0	-1	multi-exon	FALSE	canonical	1	50323	junction_1	105943.75509781051	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	241	2091	25.0	-6	True	NA	NA
PB.3615.4	chr14	+	2775	15	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	28410	junction_2	114253.94609469373	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	392	2257	25.0	-6	True	NA	NA
PB.3615.5	chr14	+	2847	16	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	34434	junction_1	114780.23022330787	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	464	2329	25.0	0	True	NA	NA
PB.3615.2	chr14	+	2691	14	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	73280	junction_5	99194.1922579945	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	323	2173	25.0	-684	False	NA	NA
PB.3615.3	chr14	+	2687	14	full-splice_match	DGLUCY	ENST00000256324.14	2967	14	0	280	0	0	multi-exon	FALSE	canonical	1	102665	junction_1	93056.44021361858	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	303	2168	30.0	-10	True	NA	NA
PB.11874.1	chr9	+	3213	11	novel_in_catalog	GTF3C5	novel	1999	9	NA	NA	2	-3	intron_retention	FALSE	canonical	1	15518	junction_1	291352.3152970643	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	209	1681	15.0	-309	False	ATTAAA	-11
PB.3615.1	chr14	+	2854	14	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	1	11033	junction_1	111888.54287297107	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	486	2336	25.0	-53	False	NA	NA
PB.3615.8	chr14	+	2491	13	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	22609	junction_11	100220.3985751182	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	241	1971	25.0	-6	True	NA	NA
PB.3615.9	chr14	+	2620	14	novel_in_catalog	DGLUCY	novel	909	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	50323	junction_1	100373.801262607	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	236	2101	30.0	-1	True	NA	NA
PB.6862.1	chr2	+	1952	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	161	-46	-25	46	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	77	1213	10.0	-70	False	AATGAA	-19
PB.10095.5	chr6	+	4185	6	novel_not_in_catalog	AL049697.1	novel	2301	16	NA	NA	36244	628	intron_retention	FALSE	non_canonical	0	0	junction_5	97825.76551727054	NA	6	NA	TRUE	NA	NA	NA	B	coding	194	585	28	612	40.0	0	True	AATAAA	-24
PB.10095.4	chr6	+	2291	7	novel_in_catalog	AL049697.1	novel	2301	16	NA	NA	36242	696	intron_retention	FALSE	canonical	1	149672	junction_1	53017.89984838454	NA	6	NA	TRUE	NA	NA	NA	B	coding	259	780	30	809	50.0	-2	True	AATAAA	-11
PB.10095.3	chr6	+	4203	6	novel_in_catalog	AL049697.1	novel	2301	16	NA	NA	36233	628	intron_retention	FALSE	canonical	1	149672	junction_1	55951.29596497296	NA	4	NA	TRUE	NA	NA	NA	B	coding	194	585	39	623	40.0	-11	False	AATAAA	-24
PB.10095.2	chr6	+	1845	8	full-splice_match	SLC35A1	ENST00000369552.8	1851	8	0	6	0	0	multi-exon	FALSE	canonical	1	149672	junction_1	49136.11672794301	NA	2	NA	TRUE	NA	NA	NA	A	coding	337	1014	28	1041	50.0	0	True	AATAAA	-11
PB.10095.1	chr6	+	4385	7	novel_not_in_catalog	AL049697.1	novel	2301	16	NA	NA	36192	696	intron_retention	FALSE	canonical	1	5386	junction_2	118740.0393470496	NA	6	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-52	False	AATAAA	-11
PB.6862.6	chr2	+	5661	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	178	-3772	-8	-101	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	60	1196	10.0	-53	False	ATTAAA	-18
PB.6862.9	chr2	+	2424	11	novel_not_in_catalog	HNRNPA3	novel	2067	11	NA	NA	-7	-619	any annotated donor/acceptor	FALSE	canonical	1	811	junction_3	165674.64824359823	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	59	1129	25.0	-52	False	AATAAA	-13
PB.6862.8	chr2	+	2491	11	novel_not_in_catalog	HNRNPA3	novel	2067	11	NA	NA	-8	-619	any annotated donor/acceptor	FALSE	canonical	1	811	junction_3	161993.3641401709	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	60	1196	25.0	-53	False	AATAAA	-13
PB.634.11	chr1	-	2489	7	full-splice_match	NRAS	ENST00000369535.4	4449	7	119	1841	119	-1841	multi-exon	FALSE	canonical	1	624239	junction_5	110273.2572769673	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	136	705	25.0	-11	True	GATAAA	-12
PB.11361.1	chr8	-	2072	10	incomplete-splice_match	TSNARE1	ENST00000524325.5	1963	14	-4	87804	-4	232	3prime_fragment	FALSE	canonical	1	39689	junction_9	19687.620684638918	NA	5	NA	TRUE	NA	NA	NA	A	coding	470	1413	181	1593	30.0	-96	False	TTTAAA	-15
PB.634.12	chr1	-	1831	7	full-splice_match	NRAS	ENST00000369535.4	4449	7	123	2495	123	-2495	multi-exon	FALSE	canonical	1	624239	junction_5	110273.2572769673	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	132	701	30.0	-7	True	AATATA	-16
PB.1925.1	chr11	-	1865	11	full-splice_match	PACSIN3	ENST00000298838.10	1843	11	-36	14	0	1	multi-exon	FALSE	canonical	1	137925	junction_10	124471.17248198476	NA	0	NA	TRUE	NA	NA	NA	A	coding	424	1275	199	1473	60.0	-37	True	ATTAAA	-21
PB.402.4	chr1	+	2771	23	full-splice_match	OSBPL9	ENST00000495776.5	2831	23	-2	62	-2	-57	multi-exon	FALSE	canonical	1	47948	junction_2	250105.65748597065	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	438	2153	30.0	-2	True	ATTAAA	-27
PB.402.5	chr1	+	3658	24	full-splice_match	OSBPL9	ENST00000428468.5	2893	24	-17	-748	0	748	multi-exon	FALSE	canonical	1	222333	junction_4	238126.61209878372	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	20	2230	25.0	0	True	CATAAA	-42
PB.402.6	chr1	+	2838	24	full-splice_match	OSBPL9	ENST00000428468.5	2893	24	-17	72	0	-67	multi-exon	FALSE	canonical	1	222333	junction_4	238126.61209878372	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	20	2230	40.0	0	True	ATTAAA	-17
PB.402.7	chr1	+	2717	22	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	3	-67	combination_of_known_junctions	FALSE	canonical	1	47948	junction_2	258143.69573348737	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	433	2109	40.0	3	True	ATTAAA	-17
PB.402.1	chr1	+	2550	24	full-splice_match	OSBPL9	ENST00000428468.5	2893	24	-24	367	-7	136	multi-exon	FALSE	canonical	1	222333	junction_4	238126.61209878372	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	27	2237	35.0	-7	True	TATAAA	-25
PB.402.2	chr1	+	2869	23	incomplete-splice_match	OSBPL9	ENST00000371714.5	3352	26	39910	5	-3	0	5prime_fragment	FALSE	canonical	1	222333	junction_4	245655.8476926722	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	23	2194	35.0	-3	True	CATAAA	-24
PB.402.3	chr1	+	2884	24	novel_not_in_catalog	OSBPL9	novel	3352	26	NA	NA	-2	-67	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	285892.3478146215	NA	9	2	TRUE	NA	NA	NA	C	coding	521	1566	711	2276	40.0	-2	True	ATTAAA	-17
PB.402.8	chr1	+	2772	24	full-splice_match	OSBPL9	ENST00000428468.5	2893	24	-17	138	0	-133	multi-exon	FALSE	canonical	1	222333	junction_4	238126.61209878372	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	20	2230	35.0	0	True	ATTAAA	-20
PB.402.9	chr1	+	2667	9	incomplete-splice_match	OSBPL9	ENST00000428468.5	2893	24	-17	30045	0	-1122	3prime_fragment	FALSE	canonical	1	222333	junction_4	89030.71879544933	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	20	616	75.0	0	True	NA	NA
PB.11935.9	chrM	+	1675	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	137	0	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	NA	NA
PB.11935.8	chrM	+	1738	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	74	0	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	AAAACA	-44
PB.11935.3	chrM	+	2319	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	-507	0	507	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	ACTAAA	-15
PB.11935.2	chrM	+	883	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	929	0	-929	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-2	True	NA	NA
PB.11935.1	chrM	+	1560	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	252	0	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-20
PB.1939.1	chr11	-	4107	19	full-splice_match	FOLH1	ENST00000256999.6	2635	19	70	-1542	2	1542	multi-exon	FALSE	canonical	1	2006	junction_4	173444.63773788966	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	192	2444	25.0	1	True	AATAAA	-23
PB.11935.6	chrM	+	1982	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	-170	0	170	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-2	True	CATAAA	-22
PB.1939.3	chr11	-	2508	18	full-splice_match	FOLH1	ENST00000356696.7	2403	18	-102	-3	2	2	multi-exon	FALSE	canonical	1	2006	junction_3	176114.8700398766	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	226	2385	25.0	5	True	AATAAA	-20
PB.1939.2	chr11	-	2607	19	full-splice_match	FOLH1	ENST00000256999.6	2635	19	30	-2	-2	2	multi-exon	FALSE	canonical	1	2006	junction_4	173444.63773788966	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	232	2484	25.0	-1	True	AATAAA	-20
PB.86.1	chr1	+	1948	9	full-splice_match	PEX14	ENST00000356607.8	1985	9	35	2	35	-2	multi-exon	FALSE	canonical	1	206095	junction_3	28886.990622672605	NA	0	NA	TRUE	NA	NA	NA	A	coding	377	1134	46	1179	10.0	-32	False	AATAAA	-19
PB.636.14	chr1	-	4026	1	genic	SIKE1	novel	NA	NA	NA	NA	-6	-282	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-46	True	NA	NA
PB.636.13	chr1	-	1478	5	full-splice_match	SIKE1	ENST00000369528.9	5506	5	-1	4029	-1	634	multi-exon	FALSE	canonical	1	39609	junction_4	142663.8906440151	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	80	715	75.0	-41	True	ATTAAA	-12
PB.636.12	chr1	-	1486	5	full-splice_match	SIKE1	ENST00000060969.5	2190	5	-17	721	-9	646	multi-exon	FALSE	canonical	1	259561	junction_4	53413.73605812928	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	88	711	80.0	-49	True	ATTAAA	-24
PB.636.11	chr1	-	1559	6	novel_not_in_catalog	SIKE1	novel	5506	5	NA	NA	-14	646	any annotated donor/acceptor	FALSE	canonical	1	6969	junction_3	166728.23446267282	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	42	482	80.0	-3	True	ATTAAA	-24
PB.636.10	chr1	-	2203	5	full-splice_match	SIKE1	ENST00000060969.5	2190	5	-9	-4	-1	4	multi-exon	FALSE	canonical	1	259561	junction_4	53413.73605812928	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	80	703	25.0	-41	True	AAAACA	-5
PB.6535.25	chr2	-	3876	6	novel_in_catalog	C2orf42	novel	579	2	NA	NA	14	-41587	intron_retention	FALSE	canonical	1	291783	junction_1	101943.52510561913	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	172	573	15.0	13	True	AATAAA	-11
PB.3677.18	chr14	+	2305	12	full-splice_match	TRAF3	ENST00000392745.6	2459	12	21	133	21	107	multi-exon	FALSE	canonical	1	85903	junction_1	64237.87024839465	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	273	1961	65.0	-27	True	AAGAAA	-31
PB.3677.19	chr14	+	2056	9	novel_in_catalog	TRAF3	novel	7640	11	NA	NA	21	107	combination_of_known_junctions	FALSE	canonical	1	4877	junction_6	103914.20005518675	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	273	1712	65.0	-27	True	AAGAAA	-31
PB.8473.45	chr3	+	5285	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	163	-3	no_combination_of_known_junctions	FALSE	canonical	1	20416	junction_1	339384.38695033436	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	1303	2451	75.0	-774	False	TTTAAA	-6
PB.1021.8	chr1	+	3651	6	novel_in_catalog	NEK7	novel	4149	10	NA	NA	0	-37	no_combination_of_known_junctions	FALSE	canonical	1	17187	junction_5	136488.51596174677	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	329	790	80.0	0	True	AAAAAG	-43
PB.9445.11	chr5	-	3328	13	full-splice_match	AFF4	ENST00000378595.7	3348	13	12	8	12	-8	multi-exon	FALSE	canonical	1	229244	junction_12	54063.670603640014	NA	12	NA	TRUE	NA	NA	NA	C	coding	900	2703	353	3055	80.0	-2	True	NA	NA
PB.9445.10	chr5	-	3145	15	incomplete-splice_match	AFF4	ENST00000265343.9	9552	21	0	12749	0	3689	3prime_fragment	FALSE	canonical	1	229244	junction_14	55801.79682426299	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2763	381	3143	60.0	-1	True	NA	NA
PB.9445.13	chr5	-	2239	11	incomplete-splice_match	AFF4	ENST00000378595.7	3348	13	-37	4975	-21	19	3prime_fragment	FALSE	canonical	1	229244	junction_10	43871.551137838745	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1836	402	2237	40.0	-1	True	NA	NA
PB.9445.12	chr5	-	2626	11	incomplete-splice_match	AFF4	ENST00000378595.7	3348	13	-69	4620	-53	374	3prime_fragment	FALSE	canonical	1	229244	junction_10	43871.551137838745	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2193	434	2626	50.0	200	False	NA	NA
PB.3677.10	chr14	+	1868	12	full-splice_match	TRAF3	ENST00000392745.6	2459	12	72	519	11	-279	multi-exon	FALSE	canonical	1	85903	junction_1	64237.87024839465	NA	7	1	TRUE	NA	NA	NA	C	coding	549	1647	222	1868	40.0	-1671	False	ATTAAA	-16
PB.3677.11	chr14	+	7640	11	full-splice_match	TRAF3	ENST00000560371.5	7640	11	-2	2	-2	-1	multi-exon	FALSE	canonical	1	15270	junction_1	82691.27859871318	NA	19	NA	TRUE	NA	NA	NA	C	coding	568	1707	220	1926	20.0	-1826	False	AATAAA	-17
PB.3677.12	chr14	+	2351	10	novel_in_catalog	TRAF3	novel	7640	11	NA	NA	3	31	combination_of_known_junctions	FALSE	canonical	1	14507	junction_6	113042.16544750781	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	212	1843	20.0	-123	True	AATACA	-27
PB.2674.1	chr12	-	3416	29	novel_in_catalog	ANKRD52	novel	651	6	NA	NA	5	2	combination_of_known_junctions	TRUE	canonical	1	4425	junction_1	80406.46394099729	NA	0	NA	TRUE	NA	NA	NA	A	coding	1099	3297	118	3414	5.0	-3	True	ATTAAA	-18
PB.3677.14	chr14	+	2716	13	novel_not_in_catalog	TRAF3	novel	7640	11	NA	NA	-37	19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	108169.08495794392	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1435	2220	15.0	-85	True	AATACA	-15
PB.3677.15	chr14	+	2447	11	full-splice_match	TRAF3	ENST00000347662.8	7700	11	45	5208	-33	30	multi-exon	FALSE	canonical	1	14507	junction_7	96299.59038069686	NA	1	1	TRUE	NA	NA	NA	C	coding	537	1614	327	1940	20.0	-81	True	AATACA	-26
PB.3677.16	chr14	+	2292	10	novel_in_catalog	TRAF3	novel	7640	11	NA	NA	20	21	no_combination_of_known_junctions	FALSE	canonical	1	6067	junction_7	102794.40891350339	NA	3	NA	TRUE	NA	NA	NA	C	coding	506	1521	274	1794	15.0	-28	True	AATACA	-17
PB.3677.17	chr14	+	2525	11	full-splice_match	TRAF3	ENST00000560371.5	7640	11	102	5013	21	226	multi-exon	FALSE	canonical	1	15270	junction_1	82691.27859871318	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	134	1822	35.0	-27	True	TATAAA	-15
PB.10334.1	chr6	+	3048	6	novel_not_in_catalog	TCP10L2	novel	597	4	NA	NA	-29	-1941	any annotated donor/acceptor	FALSE	canonical	1	369	junction_3	235.23826219388715	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-7418	False	AGTAAA	-14
PB.6841.1	chr2	-	1729	3	full-splice_match	AC078883.1	ENST00000450443.1	1397	3	132	-464	-56	464	multi-exon	FALSE	canonical	1	18198	junction_1	6284.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	108	327	3	329	85.0	-21	True	NA	NA
PB.2653.1	chr12	+	1411	2	full-splice_match	METTL7B	ENST00000394252.3	1506	2	92	3	-40	0	multi-exon	FALSE	canonical	1	142651	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	244	735	118	852	40.0	-5559	False	AATAAA	-15
PB.8162.2	chr3	+	1870	1	genic	AC006252.1	novel	NA	NA	NA	NA	-32	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-7005	False	AATGAA	-5
PB.8958.2	chr4	-	4322	6	novel_not_in_catalog	MAD2L1	novel	5468	5	NA	NA	1	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	124716.47772832586	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	87	704	40.0	-32	True	GATAAA	-23
PB.1222.12	chr1	+	1849	7	full-splice_match	GPR137B	ENST00000366592.7	2042	7	1	192	1	-192	multi-exon	FALSE	canonical	1	179295	junction_2	26349.71644639759	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	136	1290	30.0	-20	True	ATTAAA	-19
PB.8162.1	chr3	+	2196	1	genic	AC006252.1	novel	NA	NA	NA	NA	-39	317	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-7012	False	NA	NA
PB.7187.8	chr20	-	3225	13	novel_in_catalog	SNX5	novel	3087	14	NA	NA	-753	-70	intron_retention	FALSE	canonical	1	37793	junction_10	280141.86780187074	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	2177	3076	40.0	-2	True	AATAAA	-30
PB.7187.9	chr20	-	3120	13	novel_in_catalog	SNX5	novel	3087	14	NA	NA	-755	-71	intron_retention	FALSE	canonical	1	46259	junction_1	255581.98938185946	NA	6	NA	TRUE	NA	NA	NA	C	coding	299	900	2073	2972	40.0	5846	False	AATAAA	-29
PB.1222.16	chr1	+	1907	6	novel_in_catalog	GPR137B	novel	1107	5	NA	NA	-4	-2	no_combination_of_known_junctions	FALSE	canonical	1	3309	junction_5	91982.4251952513	NA	1	1	TRUE	NA	NA	NA	C	coding	313	942	129	1070	15.0	-13	True	ATTAAA	-21
PB.9354.20	chr5	-	1580	8	incomplete-splice_match	ELL2	ENST00000237853.8	6046	12	168	13269	-55	397	3prime_fragment	FALSE	canonical	1	39156	junction_5	115086.16258850123	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1398	183	1580	70.0	0	True	AAAAAG	-16
PB.7187.4	chr20	-	2027	13	full-splice_match	SNX5	ENST00000490175.5	2025	13	-8	6	3	-3	multi-exon	FALSE	canonical	1	46259	junction_1	254529.75887206633	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	374	1273	15.0	-15	False	AATAAA	-14
PB.7187.5	chr20	-	1529	14	full-splice_match	SNX5	ENST00000377768.7	2288	14	148	611	-21	-70	multi-exon	FALSE	canonical	1	46259	junction_1	220775.64854274	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	166	1380	40.0	-39	False	AATAAA	-30
PB.7187.7	chr20	-	1441	13	full-splice_match	SNX5	ENST00000490175.5	2025	13	-27	611	-16	-70	multi-exon	FALSE	canonical	1	46259	junction_1	254529.75887206633	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	393	1292	40.0	-34	False	AATAAA	-30
PB.7187.1	chr20	-	2130	14	full-splice_match	SNX5	ENST00000377768.7	2288	14	154	4	-15	-1	multi-exon	FALSE	canonical	1	46259	junction_1	220775.64854274	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	160	1374	10.0	-33	False	AATAAA	-16
PB.7187.3	chr20	-	3725	13	novel_in_catalog	SNX5	novel	3087	14	NA	NA	-753	-2	intron_retention	FALSE	canonical	1	46259	junction_1	255581.98938185946	NA	4	NA	TRUE	NA	NA	NA	C	coding	299	900	2071	2970	15.0	-2	True	AATAAA	-15
PB.6781.8	chr2	-	1240	6	full-splice_match	ARL5A	ENST00000428992.2	747	6	-10	-483	10	362	multi-exon	FALSE	canonical	1	14397	junction_5	116612.16195646147	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	156	584	85.0	-8	True	NA	NA
PB.8635.2	chr3	-	5344	1	intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	coding	128	387	3550	3936	15.0	NA	False	AATAAA	-19
PB.4266.19	chr16	+	3175	16	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	5258	-2	intron_retention	FALSE	canonical	1	38	junction_1	307535.29913696443	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1479	287	1765	30.0	111	False	AATAAA	-16
PB.765.6	chr1	-	1820	14	novel_not_in_catalog	ILF2	novel	1906	14	NA	NA	-7685	2	any annotated donor/acceptor	FALSE	canonical	1	1359	junction_13	1270980.6610743604	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	400	1458	0.0	-7747	False	ATTAAA	-18
PB.4266.11	chr16	+	2534	17	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	0	165	intron_retention	FALSE	non_canonical	0	0	junction_16	333159.8945859122	NA	1	1	TRUE	NA	NA	NA	C	coding	483	1452	96	1547	70.0	-21	True	AATAAA	-22
PB.4266.10	chr16	+	3122	18	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	0	11001	intron_retention	FALSE	non_canonical	0	0	junction_16	340251.43411095353	NA	1	1	TRUE	NA	NA	NA	C	coding	483	1452	96	1547	75.0	-21	True	NA	NA
PB.4266.13	chr16	+	1972	17	novel_in_catalog	PDXDC1	novel	2963	23	NA	NA	0	38	intron_retention	FALSE	canonical	1	12324	junction_8	348249.9158959877	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	78	1571	70.0	-3	True	AATACA	-13
PB.4266.12	chr16	+	4079	25	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_2	326377.23781853344	NA	3	1	TRUE	NA	NA	NA	C	coding	773	2322	347	2668	35.0	-5	True	AATAAA	-17
PB.1780.13	chr11	-	3386	4	incomplete-splice_match	TRIM5	ENST00000380027.5	2290	11	187249	12154	-46	2229	internal_fragment	FALSE	canonical	1	100129	junction_3	160968.9626322071	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	156	929	80.0	-67	True	NA	NA
PB.1448.1	chr10	-	2978	7	full-splice_match	SAR1A	ENST00000373241.8	2996	7	10	8	-1	-8	multi-exon	FALSE	canonical	1	495152	junction_3	158610.29696476203	NA	4	NA	TRUE	NA	NA	NA	A	coding	198	597	118	714	45.0	-2	True	NA	NA
PB.1780.11	chr11	-	3240	7	full-splice_match	TRIM5	ENST00000396847.7	3170	7	-21	-49	0	-4	multi-exon	FALSE	canonical	1	78586	junction_2	142733.32461583347	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	258	1301	35.0	-21	True	AATAAA	-12
PB.1780.10	chr11	-	2810	7	novel_in_catalog	AC104389.4	novel	1761	8	NA	NA	-6629	-74655	intron_retention	FALSE	canonical	1	9481	junction_3	150505.93867509754	NA	0	NA	TRUE	NA	NA	NA	B	coding	271	816	110	925	35.0	-21	True	AATAAA	-13
PB.7197.1	chr20	+	1038	6	full-splice_match	NAA20	ENST00000334982.8	1260	6	217	5	-15	-5	multi-exon	FALSE	canonical	1	343842	junction_1	450843.999655047	NA	0	NA	TRUE	NA	NA	NA	A	coding	178	537	65	601	25.0	-29	True	TATAAA	-30
PB.1549.8	chr10	-	2805	21	full-splice_match	NOC3L	ENST00000371361.3	3455	21	-18	668	2	-668	multi-exon	FALSE	canonical	1	153658	junction_15	56903.40291660948	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	120	2522	45.0	-19	True	TTTAAA	-26
PB.1549.9	chr10	-	1414	11	incomplete-splice_match	NOC3L	ENST00000371361.3	3455	21	-11	13286	9	-36	3prime_fragment	FALSE	canonical	1	153658	junction_5	49981.71428232529	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1302	113	1414	65.0	-12	True	AAAACA	-34
PB.1549.4	chr10	-	3415	21	novel_not_in_catalog	NOC3L	novel	3455	21	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	canonical	1	1797	junction_14	78918.18249128334	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	151	2466	30.0	-1	True	AATAAA	-23
PB.3796.1	chr15	-	1482	5	full-splice_match	NDUFAF1	ENST00000260361.8	1461	5	-27	6	-12	-6	multi-exon	FALSE	canonical	1	44873	junction_4	117839.21052513675	NA	0	NA	TRUE	NA	NA	NA	A	coding	327	984	410	1393	35.0	-12	True	AATAAA	-21
PB.1549.6	chr10	-	1856	9	novel_in_catalog	NOC3L	novel	3455	21	NA	NA	18012	-2	no_combination_of_known_junctions	FALSE	canonical	1	3358	junction_8	101869.68614086087	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	332	907	30.0	NA	False	AATAAA	-23
PB.1549.7	chr10	-	3049	21	full-splice_match	NOC3L	ENST00000371361.3	3455	21	-49	455	-29	-455	multi-exon	FALSE	canonical	1	153658	junction_15	56903.40291660948	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	151	2553	60.0	-1	True	AATATA	-21
PB.1549.1	chr10	-	3453	21	full-splice_match	NOC3L	ENST00000371361.3	3455	21	1	1	1	-1	multi-exon	FALSE	canonical	1	153658	junction_15	56903.40291660948	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	101	2503	30.0	0	True	AATAAA	-24
PB.1549.2	chr10	-	3406	22	novel_not_in_catalog	NOC3L	novel	3455	21	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	1980	junction_1	77291.88451492484	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	138	2540	30.0	12	False	AATAAA	-24
PB.2333.2	chr11	-	2807	2	full-splice_match	MIR100HG	ENST00000528986.1	3287	2	478	2	-12	-2	multi-exon	FALSE	canonical	1	72859	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	16	51	273	323	25.0	1	True	AATAAA	-15
PB.2333.3	chr11	-	3035	4	full-splice_match	MIR100HG	ENST00000534782.3	556	4	38	-2517	-21	-2	multi-exon	TRUE	canonical	1	19388	junction_3	13555.150484840316	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3	True	AATAAA	-15
PB.2333.4	chr11	-	3868	1	novel_in_catalog	MIR100HG	novel	775	2	NA	NA	680	-4271	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.2333.5	chr11	-	2083	1	novel_in_catalog	MIR100HG	novel	775	2	NA	NA	680	2993	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	TTTAAA	-24
PB.8589.18	chr3	+	4398	8	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	17982	junction_5	297773.6047818468	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	333	1181	15.0	0	True	AATAAA	-18
PB.6227.4	chr19	+	2377	10	full-splice_match	EPN1	ENST00000085079.11	2355	10	-16	-6	3	6	multi-exon	FALSE	canonical	1	154904	junction_4	427688.31218098797	NA	9	1	TRUE	NA	NA	NA	C	coding	550	1653	309	1961	20.0	1	True	AATAAA	-29
PB.8348.12	chr3	+	4603	7	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	239	25604	-2	9610	intron_retention	FALSE	canonical	1	220702	junction_1	57100.229286609116	NA	1	NA	TRUE	NA	NA	NA	C	coding	1163	3492	28	3519	45.0	-2	True	NA	NA
PB.8348.13	chr3	+	6184	7	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	239	24023	-2	11191	intron_retention	FALSE	canonical	1	220702	junction_1	57100.229286609116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1163	3492	28	3519	85.0	-2	True	AAGAAA	-30
PB.8348.10	chr3	+	7533	17	full-splice_match	PARP14	ENST00000474629.6	7915	17	215	167	-26	-152	multi-exon	FALSE	canonical	1	220702	junction_1	102087.50895119038	NA	0	NA	TRUE	NA	NA	NA	C	coding	1801	5406	52	5457	10.0	-6	True	AATAAA	-38
PB.8348.11	chr3	+	4726	14	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	224	12005	-17	-2133	3prime_fragment	FALSE	canonical	1	220702	junction_1	76526.06155031348	NA	0	NA	TRUE	NA	NA	NA	C	coding	1561	4683	43	4725	65.0	3	True	NA	NA
PB.8348.16	chr3	+	3476	7	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	240	26730	-1	8484	3prime_fragment	FALSE	canonical	1	220702	junction_1	57100.229286609116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1150	3450	27	3476	15.0	-1	True	NA	NA
PB.8348.17	chr3	+	5011	16	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	240	2985	-1	-2970	3prime_fragment	FALSE	canonical	1	220702	junction_1	73522.29573570788	NA	3	NA	TRUE	NA	NA	NA	C	coding	1661	4983	27	5009	60.0	-1	True	NA	NA
PB.8348.14	chr3	+	3119	16	full-splice_match	PARP14	ENST00000649945.1	5411	16	-4	2296	-2	-2296	multi-exon	FALSE	canonical	1	2843	junction_5	138453.85057877188	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2121	998	3118	20.0	-2	True	NA	NA
PB.8348.15	chr3	+	2196	1	novel_in_catalog	PARP14	novel	7915	17	NA	NA	-2	-9287	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	90	273	28	300	80.0	-2	True	NA	NA
PB.8348.18	chr3	+	4553	8	novel_not_in_catalog	PARP14	novel	7915	17	NA	NA	0	9613	intron_retention	FALSE	non_canonical	0	0	junction_1	122455.21362339385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3441	26	3466	40.0	0	True	NA	NA
PB.8839.4	chr4	-	2030	7	full-splice_match	CCNI	ENST00000237654.8	2772	7	16	726	0	231	multi-exon	FALSE	canonical	1	1861986	junction_6	665618.3904683423	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	562	1695	15.0	-1	True	ATTAAA	-13
PB.3230.11	chr13	+	3055	24	incomplete-splice_match	IPO5	ENST00000469360.5	3505	26	8584	148	5677	-2	5prime_fragment	FALSE	canonical	1	973664	junction_16	351378.3353441163	NA	2	NA	TRUE	NA	NA	NA	C	coding	993	2982	16	2997	5.0	-7347	False	AATAAA	-17
PB.3230.10	chr13	+	3806	24	incomplete-splice_match	IPO5	ENST00000469360.5	3505	26	8456	-475	5549	0	5prime_fragment	FALSE	canonical	1	973664	junction_16	351378.3353441163	NA	2	1	TRUE	NA	NA	NA	C	coding	1037	3114	12	3125	15.0	-7475	False	AATAAA	-37
PB.3230.13	chr13	+	4186	23	incomplete-splice_match	IPO5	ENST00000469360.5	3505	26	12097	-1048	-4090	573	5prime_fragment	FALSE	canonical	1	973664	junction_15	352156.74095618003	NA	1	NA	TRUE	NA	NA	NA	C	coding	922	2769	164	2932	30.0	-3834	False	ATTAAA	-14
PB.8706.4	chr4	+	5620	8	full-splice_match	CD38	ENST00000226279.7	5668	8	58	-10	24	10	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	80	982	45.0	8	True	AATAAA	-23
PB.584.7	chr1	+	2248	19	full-splice_match	STXBP3	ENST00000370008.3	2478	19	-13	243	1	-243	multi-exon	FALSE	canonical	1	285570	junction_9	58704.49084016034	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	64	1842	45.0	1	True	AATAAA	-25
PB.8188.5	chr3	-	3815	14	novel_in_catalog	ARHGEF3	novel	3602	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	3700	junction_12	80734.3020544119	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	348	1964	15.0	-28	False	AATAAA	-18
PB.8188.2	chr3	-	3643	13	full-splice_match	ARHGEF3	ENST00000338458.8	3639	13	-4	0	-4	0	multi-exon	FALSE	canonical	1	18800	junction_12	71545.11400663375	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	115	1791	15.0	-10	True	AATAAA	-19
PB.8188.3	chr3	-	3566	12	novel_in_catalog	ARHGEF3	novel	3602	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2430	junction_11	70023.1592624248	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	131	1714	15.0	-22	False	AATAAA	-19
PB.8188.1	chr3	-	3586	10	full-splice_match	ARHGEF3	ENST00000296315.7	3602	10	16	0	-2	0	multi-exon	FALSE	canonical	1	100911	junction_9	34390.50628039986	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	154	1734	15.0	-3	True	AATAAA	-19
PB.584.4	chr1	+	5495	18	novel_in_catalog	STXBP3	novel	561	4	NA	NA	-5	-13	intron_retention	FALSE	canonical	1	304279	junction_4	52651.37623756233	NA	5	NA	TRUE	NA	NA	NA	C	coding	285	858	4002	4859	40.0	-5	True	AATAAA	-7
PB.2323.2	chr11	+	2703	2	antisense	novelGene_AP003396.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	433	1302	515	1816	15.0	0	True	AATAAA	-19
PB.2323.1	chr11	+	2785	1	full-splice_match	RNF26	ENST00000311413.4	2787	1	-2	4	-2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	433	1302	599	1900	15.0	-2	True	AATAAA	-17
PB.584.3	chr1	+	2393	18	novel_in_catalog	STXBP3	novel	561	4	NA	NA	-6	-9	no_combination_of_known_junctions	FALSE	canonical	1	5063	junction_9	108065.2773539757	NA	1	NA	TRUE	NA	NA	NA	C	coding	560	1683	71	1753	35.0	-6	True	AATAAA	-11
PB.5637.10	chr19	-	2904	9	novel_in_catalog	SAFB2	novel	3371	21	NA	NA	-3	-4416	intron_retention	FALSE	canonical	1	354841	junction_5	136574.9379971944	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	65	733	55.0	-4	True	AAAAAG	-28
PB.5637.11	chr19	-	1565	11	incomplete-splice_match	SAFB2	ENST00000252542.8	3371	21	199	17644	-5	-4417	3prime_fragment	FALSE	canonical	1	324863	junction_5	144535.4151599185	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1497	67	1563	55.0	-6	True	AAAAAG	-27
PB.8213.1	chr3	-	8183	8	full-splice_match	PRICKLE2	ENST00000638394.1	9956	8	140	1633	140	-4	multi-exon	TRUE	canonical	1	12243	junction_7	12926.979613133431	NA	13	NA	TRUE	NA	NA	NA	A	coding	844	2535	473	3007	40.0	9	True	AATAAA	-9
PB.3513.2	chr14	-	1165	4	full-splice_match	PIGH	ENST00000216452.8	1420	4	17	238	-2	165	multi-exon	FALSE	canonical	1	28521	junction_3	2685.6158821891613	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	68	634	40.0	-3	True	AATAAA	-11
PB.3513.1	chr14	-	1431	4	full-splice_match	PIGH	ENST00000216452.8	1420	4	-13	2	-13	-2	multi-exon	FALSE	canonical	1	28521	junction_3	2685.6158821891613	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	98	664	25.0	-33	True	AATAAA	-14
PB.6880.13	chr2	+	2675	13	incomplete-splice_match	ITGA4	ENST00000233573.6	2070	16	-55	13381	-31	592	intron_retention	FALSE	canonical	1	236407	junction_5	77158.41949355272	NA	1	1	TRUE	NA	NA	NA	C	coding	442	1329	343	1671	75.0	-13	True	NA	NA
PB.10946.10	chr7	+	2844	6	novel_not_in_catalog	INSIG1	novel	2623	6	NA	NA	-11	-3	any annotated donor/acceptor	FALSE	canonical	1	3090	junction_4	567927.702895571	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	218	865	25.0	0	True	ATTAAA	-9
PB.1137.7	chr1	-	2560	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	131	-15	any annotated donor/acceptor	FALSE	canonical	1	2318	junction_3	86948.64774489979	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	198	1646	70.0	1837	False	AAGAAA	-28
PB.11096.8	chr8	-	3697	17	full-splice_match	FGFR1	ENST00000326324.10	3816	17	-18	137	1	-21	multi-exon	FALSE	non_canonical	0	0	junction_9	253164.37981576318	NA	2	1	TRUE	NA	NA	NA	C	coding	731	2196	743	2938	90.0	0	True	NA	NA
PB.7603.1	chr22	-	1736	10	full-splice_match	ESS2	ENST00000252137.10	5392	10	3	3653	3	5	multi-exon	FALSE	canonical	1	132242	junction_9	62186.62034990493	NA	0	NA	TRUE	NA	NA	NA	A	coding	476	1431	42	1472	5.0	19	False	ATTAAA	-22
PB.10044.17	chr6	+	3389	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	177	1702	-2	-27	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	1	NA	TRUE	NA	NA	NA	C	coding	1061	3186	68	3253	25.0	-5	True	AAAACA	-22
PB.9536.9	chr5	-	2172	3	full-splice_match	SPRY4	ENST00000344120.4	4938	3	-20	2786	19	-239	multi-exon	FALSE	canonical	1	8674	junction_2	381.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	208	1176	25.0	-1	True	AATAAA	-22
PB.10044.16	chr6	+	2539	4	full-splice_match	ZNF451	ENST00000370708.8	9478	4	109	6830	-4	1933	multi-exon	FALSE	canonical	1	63635	junction_3	72220.43661057597	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	70	1749	25.0	-7	True	CATAAA	-15
PB.7804.31	chr22	+	2459	16	novel_in_catalog	AL022238.4	novel	4563	31	NA	NA	58025	46	intron_retention	FALSE	canonical	1	341256	junction_2	93812.00021224482	NA	12	NA	TRUE	NA	NA	NA	A	coding	539	1620	10	1629	30.0	NA	False	AATAAA	-13
PB.10946.11	chr7	+	2810	7	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	-11	-167	combination_of_known_junctions	FALSE	canonical	1	201929	junction_6	604359.1584487793	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	218	1102	55.0	0	True	NA	NA
PB.10261.1	chr6	+	2595	5	novel_not_in_catalog	UTRN	novel	12339	74	NA	NA	-518	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	144380.71509792263	NA	3	1	TRUE	NA	NA	NA	B	coding	140	423	254	676	30.0	-8	False	AATAAA	-15
PB.9621.3	chr5	-	2012	4	full-splice_match	DUSP1	ENST00000239223.3	2019	4	-2	9	-2	-9	multi-exon	FALSE	canonical	1	2007804	junction_3	1114226.064046949	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	246	1349	30.0	-3	True	AATAAA	-18
PB.6894.12	chr2	+	2424	12	full-splice_match	GULP1	ENST00000359135.7	3347	12	51	872	-9	0	multi-exon	FALSE	canonical	1	63473	junction_1	45850.54808309996	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	462	1376	85.0	-5	True	NA	NA
PB.6894.13	chr2	+	2286	11	novel_in_catalog	GULP1	novel	2643	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	19062	junction_6	70552.22772733685	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	462	1238	85.0	-5	True	NA	NA
PB.5801.4	chr19	-	3006	23	novel_in_catalog	EPS15L1	novel	681	2	NA	NA	0	-12	no_combination_of_known_junctions	FALSE	canonical	1	10485	junction_1	102985.16473753164	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	26	2416	45.0	-1	True	TATAAA	-38
PB.6738.3	chr2	-	1670	6	full-splice_match	CCDC115	ENST00000442217.5	1847	6	177	0	-37	0	multi-exon	FALSE	canonical	1	30264	junction_2	179117.8691760261	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	48	629	15.0	-30	True	NA	NA
PB.6738.2	chr2	-	1403	5	full-splice_match	CCDC115	ENST00000259229.6	1646	5	185	58	-29	-52	multi-exon	FALSE	canonical	1	269666	junction_4	67871.01092881997	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	40	582	40.0	-22	True	NA	NA
PB.6738.1	chr2	-	1790	5	full-splice_match	CCDC115	ENST00000259229.6	1646	5	171	-315	-43	315	multi-exon	FALSE	canonical	1	269666	junction_4	67871.01092881997	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	54	596	35.0	-36	True	AATACA	-27
PB.8665.8	chr4	+	1506	7	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	-11	-14	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	248080.33094191487	NA	5	1	TRUE	NA	NA	NA	B	coding	116	351	1038	1388	30.0	6	True	AATAAA	-18
PB.537.4	chr1	+	2187	13	full-splice_match	RPAP2	ENST00000610020.1	16993	13	65	14741	-55	82	multi-exon	FALSE	canonical	1	87692	junction_1	33168.778675217385	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	45	1883	50.0	-29	True	ATTAAA	-22
PB.537.1	chr1	+	3049	13	full-splice_match	RPAP2	ENST00000610020.1	16993	13	96	13848	-24	975	multi-exon	FALSE	canonical	1	87692	junction_1	33168.778675217385	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	14	1852	60.0	2	True	NA	NA
PB.9621.2	chr5	-	2880	4	full-splice_match	DUSP1	ENST00000239223.3	2019	4	1	-862	1	862	multi-exon	FALSE	canonical	1	2007804	junction_3	1114226.064046949	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	243	1346	90.0	0	True	AATACA	-6
PB.10338.69	chr6	-	4754	20	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	63	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	126535.2239977277	NA	11	1	TRUE	NA	NA	NA	C	coding	935	2808	160	2967	10.0	5228	False	GATAAA	-23
PB.10338.66	chr6	-	5271	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-10	116	any annotated donor/acceptor	FALSE	canonical	1	176	junction_3	123894.5720966473	NA	7	NA	TRUE	NA	NA	NA	C	coding	1125	3378	148	3525	20.0	-3	True	ATTAAA	-14
PB.10338.64	chr6	-	5451	22	novel_in_catalog	THBS2	novel	5811	23	NA	NA	0	116	combination_of_known_junctions	FALSE	canonical	1	485	junction_21	124429.96098059604	NA	6	NA	TRUE	NA	NA	NA	C	coding	1172	3519	187	3705	20.0	1694	False	ATTAAA	-14
PB.10338.65	chr6	-	5391	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-6	116	any annotated donor/acceptor	FALSE	canonical	1	247	junction_11	124959.86451945714	NA	4	NA	TRUE	NA	NA	NA	C	coding	640	1923	144	2066	20.0	1	True	ATTAAA	-14
PB.10338.62	chr6	-	4904	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-58	117	no_combination_of_known_junctions	FALSE	canonical	1	2058	junction_19	126375.83902086466	NA	4	NA	TRUE	NA	NA	NA	C	coding	897	2694	464	3157	15.0	-51	False	ATTAAA	-15
PB.1470.4	chr10	+	3843	2	full-splice_match	PPP3CB-AS1	ENST00000422977.1	930	2	228	-3141	228	-7	multi-exon	FALSE	canonical	1	59651	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATGAA	-12
PB.5801.7	chr19	-	2555	21	novel_in_catalog	EPS15L1	novel	681	2	NA	NA	-2	1	no_combination_of_known_junctions	FALSE	canonical	1	9623	junction_5	111724.45107686814	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	28	2085	20.0	-3	True	AATAAA	-15
PB.9745.1	chr6	-	1690	1	novel_in_catalog	TBC1D7	novel	2229	8	NA	NA	31137	-13306	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	609	False	GGGGCT	-24
PB.1470.1	chr10	+	3148	3	novel_in_catalog	PPP3CB-AS1	novel	930	2	NA	NA	196	-7	intron_retention	FALSE	canonical	1	19496	junction_2	20077.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATGAA	-12
PB.1470.3	chr10	+	3541	5	novel_in_catalog	PPP3CB-AS1	novel	930	2	NA	NA	197	-7	intron_retention	FALSE	canonical	1	12042	junction_2	17553.74374599333	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	856	1320	35.0	1	True	AATAAA	-32
PB.1470.2	chr10	+	3069	5	novel_in_catalog	PPP3CB-AS1	novel	930	2	NA	NA	196	-7	no_combination_of_known_junctions	FALSE	canonical	1	10583	junction_4	19743.80424968805	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-32
PB.11689.1	chr9	+	2398	4	intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	8474	junction_3	8646.290546946837	NA	0	NA	FALSE	NA	NA	NA	A	coding	105	318	546	863	75.0	NA	False	NA	NA
PB.10946.13	chr7	+	2614	4	full-splice_match	INSIG1	ENST00000342407.5	1127	4	-11	-1476	-11	0	multi-exon	FALSE	canonical	1	24223	junction_2	364773.92778937594	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	218	604	20.0	0	True	ATTAAA	-12
PB.1553.1	chr10	-	5409	20	incomplete-splice_match	SORBS1	ENST00000306402.10	5858	26	139119	1	-222	0	5prime_fragment	FALSE	canonical	1	55773	junction_18	71698.45252648428	NA	0	NA	TRUE	NA	NA	NA	B	coding	706	2121	4	2124	15.0	2	True	AATAAA	-22
PB.5435.1	chr18	-	5293	16	full-splice_match	DSC2	ENST00000280904.10	12325	16	-110	7142	-3	-8	multi-exon	FALSE	canonical	1	107151	junction_15	43237.61015546021	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	555	3260	50.0	-105	False	AATAAA	-8
PB.5435.2	chr18	-	4813	17	full-splice_match	DSC2	ENST00000251081.6	4826	17	13	0	13	0	multi-exon	FALSE	canonical	1	60800	junction_2	57897.01198407042	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	21	2564	35.0	0	True	AATAAA	-16
PB.1553.2	chr10	-	4568	20	incomplete-splice_match	SORBS1	ENST00000306402.10	5858	26	139112	849	-229	-848	5prime_fragment	FALSE	canonical	1	55773	junction_18	71698.45252648428	NA	0	NA	TRUE	NA	NA	NA	B	coding	706	2121	11	2131	15.0	-5	True	AATAAA	-19
PB.8006.5	chr3	+	1274	6	incomplete-splice_match	PDCD6IP	ENST00000648706.1	6049	19	2	42695	2	108	3prime_fragment	FALSE	canonical	1	536651	junction_3	66887.57937435021	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	153	968	75.0	-57	True	NA	NA
PB.8006.4	chr3	+	3054	17	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	-1	537	no_combination_of_known_junctions	FALSE	canonical	1	21513	junction_12	340642.92241452687	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	156	2432	15.0	-60	True	AATAAA	-13
PB.8006.7	chr3	+	3339	19	novel_not_in_catalog	PDCD6IP	novel	6161	18	NA	NA	9	539	any annotated donor/acceptor	FALSE	canonical	1	704	junction_6	392512.1864298972	NA	2	NA	TRUE	NA	NA	NA	C	coding	903	2712	146	2857	10.0	-50	True	AATAAA	-15
PB.8006.6	chr3	+	3533	18	full-splice_match	PDCD6IP	ENST00000307296.7	6161	18	226	2402	3	832	multi-exon	FALSE	canonical	1	21513	junction_12	322790.17155091406	NA	1	1	TRUE	NA	NA	NA	C	coding	868	2607	152	2758	25.0	-56	True	AATAAA	-19
PB.8006.1	chr3	+	4338	18	full-splice_match	PDCD6IP	ENST00000307296.7	6161	18	220	1603	1	-1581	multi-exon	FALSE	canonical	1	21513	junction_12	322790.17155091406	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	158	2764	35.0	-62	True	ATTAAA	-32
PB.7613.1	chr22	+	2067	11	novel_not_in_catalog	SEPT5	novel	2070	12	NA	NA	5	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	270278.15055050235	NA	2	1	TRUE	NA	NA	NA	C	coding	322	969	263	1231	10.0	-41	True	NA	NA
PB.7613.2	chr22	+	2255	11	full-splice_match	SEPT5	ENST00000383045.7	1588	11	24	-691	-2	1	multi-exon	FALSE	canonical	1	191963	junction_1	221981.59410818276	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	283	1419	10.0	-20	True	NA	NA
PB.8006.2	chr3	+	3145	17	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	1	539	no_combination_of_known_junctions	FALSE	canonical	1	1613	junction_5	375847.3302538379	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	1128	2663	10.0	-62	True	AATAAA	-15
PB.10275.3	chr6	-	1753	10	novel_in_catalog	KATNA1	novel	1684	10	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	6394	junction_9	83977.77083252449	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	326	1594	30.0	-7	True	AATAAA	-19
PB.10275.2	chr6	-	1771	11	full-splice_match	KATNA1	ENST00000367411.6	1984	11	120	93	9	-93	multi-exon	FALSE	canonical	1	136300	junction_10	50768.82325886626	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	230	1705	20.0	-19	True	ATTAAA	-16
PB.10275.1	chr6	-	2897	10	novel_not_in_catalog	KATNA1	novel	1684	10	NA	NA	27	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	103261.5186569195	NA	2	1	TRUE	NA	NA	NA	C	coding	383	1152	212	1363	30.0	-1	True	AATAAA	-19
PB.8706.1	chr4	+	4974	8	full-splice_match	CD38	ENST00000226279.7	5668	8	22	672	2	-672	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	116	1018	35.0	-5817	False	ATTAAA	-19
PB.8637.6	chr3	+	2680	9	full-splice_match	FYTTD1	ENST00000241502.8	6866	9	175	4011	-13	1205	multi-exon	FALSE	canonical	1	460748	junction_1	75768.27768103218	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	48	1004	20.0	39	True	AATAAA	-16
PB.11100.4	chr8	-	3611	4	full-splice_match	TM2D2	ENST00000397070.6	1631	4	14	-1994	3	-3	multi-exon	FALSE	canonical	1	43715	junction_3	184152.1774644245	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	641	1090	15.0	0	True	AATAAA	-18
PB.7266.2	chr20	+	1797	12	full-splice_match	PHF20	ENST00000374000.8	1814	12	-9	26	5	-7	multi-exon	FALSE	canonical	1	9009	junction_1	92413.40424463674	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1620	176	1795	80.0	2	True	AATAAA	-36
PB.3457.10	chr14	+	4719	44	full-splice_match	KTN1	ENST00000395314.7	4618	44	-104	3	3	0	multi-exon	FALSE	canonical	1	252824	junction_1	375988.1945787247	NA	1	NA	TRUE	NA	NA	NA	C	coding	1357	4074	173	4246	30.0	-29	True	AATAAA	-17
PB.3457.11	chr14	+	3250	32	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-102	22979	3	14	3prime_fragment	FALSE	canonical	1	252824	junction_1	247649.9027443839	NA	1	NA	TRUE	NA	NA	NA	C	coding	1026	3078	173	3250	60.0	-29	True	NA	NA
PB.3457.12	chr14	+	3098	29	incomplete-splice_match	KTN1	ENST00000459737.5	4793	46	-108	30981	4	723	3prime_fragment	FALSE	canonical	1	83287	junction_1	343495.95772398566	NA	3	NA	TRUE	NA	NA	NA	C	coding	934	2802	296	3097	40.0	-28	True	NA	NA
PB.3457.13	chr14	+	2897	26	incomplete-splice_match	KTN1	ENST00000459737.5	4793	46	-107	32652	5	-948	3prime_fragment	FALSE	canonical	1	83287	junction_1	347221.8686493717	NA	3	NA	TRUE	NA	NA	NA	C	coding	867	2601	295	2895	30.0	-27	True	NA	NA
PB.3457.14	chr14	+	4686	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	35771	junction_24	439486.9420476379	NA	3	NA	TRUE	NA	NA	NA	C	coding	1306	3921	293	4213	30.0	-25	True	AATAAA	-17
PB.3457.15	chr14	+	4457	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	8	143	combination_of_known_junctions	FALSE	canonical	1	252824	junction_1	350066.2357271383	NA	1	NA	TRUE	NA	NA	NA	C	coding	1329	3990	168	4157	50.0	-24	True	AATAAA	-16
PB.3457.16	chr14	+	4077	42	novel_in_catalog	KTN1	novel	291	2	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	2222	junction_1	369885.3876305353	NA	2	NA	TRUE	NA	NA	NA	C	coding	1145	3438	167	3604	30.0	-24	True	AATAAA	-17
PB.3457.17	chr14	+	4579	44	novel_in_catalog	KTN1	novel	291	2	NA	NA	10	143	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	396792.4965158144	NA	1	NA	TRUE	NA	NA	NA	C	coding	1329	3990	290	4279	50.0	-22	True	AATAAA	-16
PB.3457.18	chr14	+	4352	42	full-splice_match	KTN1	ENST00000438792.6	4449	42	-90	187	15	132	multi-exon	FALSE	canonical	1	252824	junction_1	340822.79097600124	NA	2	NA	TRUE	NA	NA	NA	C	coding	1300	3903	161	4063	40.0	-17	True	AATAAA	-5
PB.3457.19	chr14	+	4532	44	full-splice_match	KTN1	ENST00000395314.7	4618	44	-91	177	16	142	multi-exon	FALSE	canonical	1	252824	junction_1	375988.1945787247	NA	1	NA	TRUE	NA	NA	NA	C	coding	1357	4074	160	4233	45.0	-16	True	AATAAA	-15
PB.6182.6	chr19	+	3867	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	2	869	0	-866	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	3	NA	TRUE	NA	NA	NA	C	coding	535	1608	65	1672	65.0	10	True	NA	NA
PB.6182.7	chr19	+	3584	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	2	1152	0	690	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	65	1672	55.0	10	True	NA	NA
PB.6182.4	chr19	+	2503	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	-1	2236	-1	6	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	5	NA	TRUE	NA	NA	NA	C	coding	535	1608	68	1675	65.0	7	True	NA	NA
PB.6182.5	chr19	+	1891	4	novel_in_catalog	ZNF480	novel	2527	6	NA	NA	0	44	combination_of_known_junctions	FALSE	canonical	1	25926	junction_2	85373.47485151475	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	171	1547	60.0	8	True	NA	NA
PB.6182.2	chr19	+	4628	4	novel_in_catalog	ZNF480	novel	2527	6	NA	NA	-13	4	intron_retention	FALSE	canonical	1	25926	junction_2	85373.47485151475	NA	4	NA	TRUE	NA	NA	NA	C	coding	458	1377	184	1560	45.0	-5	True	NA	NA
PB.6182.3	chr19	+	4714	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	-1	25	-1	-22	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	68	1675	80.0	7	True	NA	NA
PB.6182.1	chr19	+	2027	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	-16	2727	-16	37	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	2	NA	TRUE	NA	NA	NA	C	coding	535	1608	83	1690	65.0	-8	True	NA	NA
PB.5295.1	chr17	+	2804	4	full-splice_match	C1QTNF1	ENST00000579760.5	1672	4	179	-1311	-12	-1	multi-exon	FALSE	canonical	1	83601	junction_1	18301.57115902591	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	261	1106	10.0	-10	True	ATTAAA	-20
PB.5295.2	chr17	+	2717	4	full-splice_match	C1QTNF1	ENST00000581774.5	1368	4	191	-1540	191	0	multi-exon	FALSE	canonical	1	6335	junction_1	54695.92745960769	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	173	1018	10.0	-4802	False	ATTAAA	-21
PB.2766.2	chr12	+	3649	6	full-splice_match	GLIPR1	ENST00000266659.7	5877	6	83	2145	10	-2145	multi-exon	FALSE	canonical	1	773102	junction_3	103296.02717123248	NA	5	NA	TRUE	NA	NA	NA	C	coding	266	801	119	919	35.0	8	True	AATAAA	-13
PB.2766.3	chr12	+	3769	6	full-splice_match	GLIPR1	ENST00000266659.7	5877	6	107	2001	34	-2001	multi-exon	FALSE	canonical	1	773102	junction_3	103296.02717123248	NA	2	NA	TRUE	NA	NA	NA	C	coding	266	801	95	895	45.0	0	True	NA	NA
PB.6182.8	chr19	+	3107	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	2	1629	0	213	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	65	1672	75.0	10	True	NA	NA
PB.2766.1	chr12	+	2971	6	full-splice_match	GLIPR1	ENST00000266659.7	5877	6	60	2846	-13	1714	multi-exon	FALSE	canonical	1	773102	junction_3	103296.02717123248	NA	3	NA	TRUE	NA	NA	NA	C	coding	266	801	142	942	20.0	-9743	False	ATTAAA	-13
PB.4424.24	chr16	+	3586	18	full-splice_match	CYLD	ENST00000398568.6	3536	18	38	-88	38	88	multi-exon	FALSE	canonical	1	62250	junction_1	111775.50185916641	NA	3	1	TRUE	NA	NA	NA	C	coding	953	2862	263	3124	30.0	2	True	AAGAAA	-34
PB.4424.25	chr16	+	3588	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	218	-5	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	119291.19662214497	NA	1	NA	TRUE	NA	NA	NA	C	coding	953	2862	529	3390	25.0	-88	False	NA	NA
PB.4424.26	chr16	+	5422	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	292	-3	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	119291.19662214497	NA	1	NA	TRUE	NA	NA	NA	C	coding	953	2862	455	3316	85.0	-14	True	NA	NA
PB.4424.27	chr16	+	3821	19	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	300	2	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	140923.37657669777	NA	1	NA	TRUE	NA	NA	NA	C	coding	953	2862	584	3445	40.0	-6	True	AATAAA	-20
PB.4424.20	chr16	+	2401	14	incomplete-splice_match	CYLD	ENST00000398568.6	3536	18	36	5287	36	-3293	3prime_fragment	FALSE	canonical	1	62250	junction_1	113758.12601902754	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2136	265	2400	55.0	0	True	NA	NA
PB.4424.21	chr16	+	5202	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	36	-3	any annotated donor/acceptor	FALSE	canonical	1	22381	junction_7	133071.48675764195	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	265	3096	85.0	0	True	NA	NA
PB.4424.22	chr16	+	4400	18	full-splice_match	CYLD	ENST00000398568.6	3536	18	37	-901	37	449	multi-exon	FALSE	canonical	1	62250	junction_1	111775.50185916641	NA	3	1	TRUE	NA	NA	NA	C	coding	953	2862	264	3125	50.0	1	True	TATAAA	-15
PB.4424.23	chr16	+	3225	13	novel_in_catalog	CYLD	novel	777	3	NA	NA	37	-7	combination_of_known_junctions	FALSE	canonical	1	35208	junction_2	150801.87360690904	NA	2	1	TRUE	NA	NA	NA	C	coding	698	2097	401	2497	30.0	1	True	AATAAA	-7
PB.5376.1	chr18	-	3650	19	full-splice_match	L3MBTL4	ENST00000317931.11	3560	19	-102	12	-102	-12	multi-exon	FALSE	canonical	1	12193	junction_18	7390.744959235783	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	304	2148	30.0	-107	False	AATAAA	-14
PB.5376.2	chr18	-	3563	18	novel_in_catalog	L3MBTL4	novel	3546	20	NA	NA	-96	-1	no_combination_of_known_junctions	FALSE	canonical	1	3042	junction_14	9308.372119897836	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	467	2050	30.0	-101	False	AATAAA	-25
PB.5376.3	chr18	-	3378	18	novel_not_in_catalog	L3MBTL4	novel	3546	20	NA	NA	-13	-20	any annotated donor/acceptor	FALSE	canonical	1	100	junction_1	10655.206896161144	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	215	1672	55.0	-18	True	AATAAA	-6
PB.4424.28	chr16	+	3653	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	301	2	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	139146.33281484665	NA	4	NA	TRUE	NA	NA	NA	C	coding	943	2832	446	3277	40.0	-5	True	AATAAA	-20
PB.4424.29	chr16	+	3672	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	313	3	any annotated donor/acceptor	FALSE	canonical	1	12281	junction_1	119291.19662214497	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	434	3295	35.0	7	True	AATAAA	-21
PB.5376.6	chr18	-	4106	15	incomplete-splice_match	L3MBTL4	ENST00000400104.7	4534	17	7	61429	7	-61429	3prime_fragment	FALSE	canonical	1	12193	junction_14	6597.8763547718245	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	195	1571	90.0	2	True	NA	NA
PB.8293.5	chr3	+	2201	7	novel_not_in_catalog	CD200	novel	551	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	6630	junction_4	105132.21383955327	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	58	489	35.0	0	True	ATTAAA	-13
PB.8293.4	chr3	+	4520	4	incomplete-splice_match	CD200	ENST00000478595.1	2017	5	-22	9242	0	3748	3prime_fragment	FALSE	canonical	1	25018	junction_2	105700.96595059523	NA	3	NA	TRUE	NA	NA	NA	C	coding	76	231	198	428	20.0	0	True	AATAAA	-19
PB.8293.7	chr3	+	2526	7	novel_not_in_catalog	CD200	novel	551	3	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	1329	junction_1	103659.28114005143	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	479	1267	35.0	13	True	ATTAAA	-13
PB.8293.6	chr3	+	2124	6	full-splice_match	CD200	ENST00000315711.12	2129	6	2	3	2	0	multi-exon	FALSE	canonical	1	73344	junction_1	73475.4783791164	NA	2	1	TRUE	NA	NA	NA	C	coding	269	810	56	865	35.0	2	True	ATTAAA	-13
PB.8293.1	chr3	+	2014	5	full-splice_match	CD200	ENST00000383681.7	1997	5	8	-25	8	0	multi-exon	FALSE	canonical	1	47169	junction_1	86675.48741282047	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	168	755	35.0	30	True	ATTAAA	-13
PB.10615.4	chr7	+	1683	8	novel_not_in_catalog	STAG3L1	novel	1192	8	NA	NA	36	556	intron_retention	FALSE	non_canonical	0	0	junction_3	3597.326773920788	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	AGTAAA	-23
PB.8293.2	chr3	+	4358	4	novel_in_catalog	CD200	novel	551	3	NA	NA	43	0	intron_retention	FALSE	canonical	1	47169	junction_1	99749.8013331355	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	2794	3099	35.0	-45	False	ATTAAA	-13
PB.1647.5	chr10	+	3657	1	novel_in_catalog	DUSP5	novel	2557	4	NA	NA	31	-4003	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	103	312	1990	2301	80.0	-8108	False	NA	NA
PB.1647.4	chr10	+	1938	4	novel_not_in_catalog	DUSP5	novel	2557	4	NA	NA	-462	-29	any annotated donor/acceptor	FALSE	canonical	1	1470	junction_1	198758.9745165961	NA	0	NA	TRUE	NA	NA	NA	B	coding	110	333	517	849	70.0	-2	True	NA	NA
PB.8571.1	chr3	-	3827	7	full-splice_match	EHHADH	ENST00000231887.7	3850	7	21	2	21	-2	multi-exon	FALSE	canonical	1	56197	junction_6	11245.502830761578	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	56	2227	30.0	-1	True	AATAAA	-20
PB.4100.1	chr15	-	1485	1	genic	IRAIN	novel	NA	NA	NA	NA	19	1083	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	3484	False	AATAAA	-12
PB.1647.1	chr10	+	2401	5	novel_not_in_catalog	DUSP5	novel	2557	4	NA	NA	69	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	172797.5330364991	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	136	1290	30.0	0	True	AATAAA	-15
PB.1647.3	chr10	+	2246	4	novel_not_in_catalog	DUSP5	novel	2557	4	NA	NA	-1181	-29	any annotated donor/acceptor	FALSE	canonical	1	486	junction_1	199175.90546103267	NA	1	NA	TRUE	NA	NA	NA	B	coding	110	333	825	1157	70.0	-9320	False	NA	NA
PB.8718.13	chr4	-	2838	10	incomplete-splice_match	DHX15	ENST00000336812.4	2994	14	5	11733	5	501	3prime_fragment	FALSE	canonical	1	1040316	junction_2	196478.1496269738	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	153	2105	65.0	-16	True	ATTAAA	-10
PB.10702.1	chr7	+	1604	5	full-splice_match	ZNF789	ENST00000331410.9	1654	5	52	-2	0	2	multi-exon	FALSE	canonical	1	18146	junction_3	14569.971482470375	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	219	1496	15.0	3	True	AATAAA	-17
PB.10702.2	chr7	+	1849	4	full-splice_match	ZNF789	ENST00000483089.5	2994	4	4	1141	1	-116	multi-exon	FALSE	canonical	1	17399	junction_3	17347.140327891382	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	944	1246	35.0	4	True	NA	NA
PB.10702.3	chr7	+	1744	3	full-splice_match	ZNF789	ENST00000488485.5	1884	3	18	122	-1	-122	multi-exon	FALSE	canonical	1	51742	junction_2	1785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	845	1147	20.0	-2	True	NA	NA
PB.7024.24	chr2	+	2774	13	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-16	0	intron_retention	FALSE	canonical	1	228499	junction_1	119901.40143708243	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	390	2570	30.0	31	True	AATAAA	-12
PB.10615.7	chr7	+	1829	9	novel_not_in_catalog	STAG3L1	novel	1192	8	NA	NA	42	1398	intron_retention	FALSE	non_canonical	0	0	junction_8	3852.4390975069286	NA	5	1	TRUE	NA	NA	NA	B	coding	205	618	334	951	70.0	5	True	NA	NA
PB.8718.11	chr4	-	4016	10	incomplete-splice_match	DHX15	ENST00000336812.4	2994	14	8	10552	-5	1682	3prime_fragment	FALSE	canonical	1	1040316	junction_2	196478.1496269738	NA	18	1	TRUE	NA	NA	NA	C	coding	650	1953	150	2102	50.0	-13	True	TTTAAA	-29
PB.8233.7	chr3	-	3336	1	genic	FAM86DP	novel	NA	NA	NA	NA	-17	-6516	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	114	345	2039	2383	65.0	-58	False	NA	NA
PB.8718.10	chr4	-	2699	14	full-splice_match	DHX15	ENST00000336812.4	2994	14	5	290	5	-5	multi-exon	FALSE	canonical	1	1039454	junction_4	218841.73155480498	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	153	2540	25.0	-16	True	AGTAAA	-24
PB.3043.1	chr13	-	1484	8	full-splice_match	CRYL1	ENST00000298248.11	1485	8	-6	7	2	0	multi-exon	FALSE	canonical	1	184984	junction_7	96594.91124108696	NA	0	NA	TRUE	NA	NA	NA	A	coding	319	960	70	1029	25.0	-7	True	AATAAA	-16
PB.6509.5	chr2	+	4497	8	full-splice_match	SLC1A4	ENST00000234256.3	4561	8	-17	81	-17	-79	multi-exon	FALSE	canonical	1	291415	junction_1	45436.90377987964	NA	3	NA	TRUE	NA	NA	NA	C	coding	532	1599	261	1859	20.0	-15	True	NA	NA
PB.7916.19	chr3	+	2385	4	novel_not_in_catalog	SETD5	novel	1824	10	NA	NA	0	-40	intron_retention	FALSE	canonical	1	7871	junction_2	80074.50074912875	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	NA	NA
PB.10969.10	chr8	+	2534	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	31	352	-16	325	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	42	1874	60.0	0	True	AATAAA	-24
PB.11625.86	chr9	-	2050	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	2	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	811826.2383334457	NA	2	1	TRUE	NA	NA	NA	B	coding	100	303	1257	1559	20.0	-16	True	AATAAA	-7
PB.1076.2	chr1	-	1856	14	novel_in_catalog	EIF2D	novel	750	6	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	37933	junction_5	173249.94268506614	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	121	1725	15.0	1	True	AATAAA	-17
PB.10615.6	chr7	+	2551	9	novel_not_in_catalog	STAG3L1	novel	1192	8	NA	NA	37	2028	intron_retention	FALSE	non_canonical	0	0	junction_8	3478.944559776715	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-14
PB.6509.6	chr2	+	3986	8	full-splice_match	SLC1A4	ENST00000234256.3	4561	8	-52	627	-52	-625	multi-exon	FALSE	canonical	1	291415	junction_1	45436.90377987964	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	296	1894	25.0	-50	True	AATGAA	-13
PB.809.2	chr1	-	4776	21	incomplete-splice_match	GON4L	ENST00000368331.5	7823	32	85	15125	-6	-3	3prime_fragment	FALSE	canonical	1	7584	junction_1	52406.30153471527	NA	0	NA	TRUE	NA	NA	NA	B	coding	1529	4590	91	4680	40.0	0	True	ATTAAA	-15
PB.809.1	chr1	-	7685	32	novel_in_catalog	GON4L	novel	7823	32	NA	NA	0	-2	intron_retention	FALSE	canonical	1	7584	junction_12	45537.4612044744	NA	0	NA	TRUE	NA	NA	NA	B	coding	2240	6723	98	6820	25.0	-7	True	AATAAA	-17
PB.8233.6	chr3	-	1919	4	novel_in_catalog	FAM86DP	novel	2152	5	NA	NA	-12	-1	no_combination_of_known_junctions	FALSE	canonical	1	2536	junction_2	42606.58179984246	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-53	False	NA	NA
PB.11625.80	chr9	-	3479	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_3	777795.6158028027	NA	4	1	TRUE	NA	NA	NA	B	coding	393	1182	1859	3040	10.0	0	True	AATAAA	-12
PB.9946.4	chr6	+	2869	3	incomplete-splice_match	PPARD	ENST00000311565.4	3774	9	81462	2	81462	-2	5prime_fragment	FALSE	canonical	1	216920	junction_2	76416.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	20	772	35.0	-2177	False	AATAAA	-17
PB.644.12	chr1	+	3408	23	full-splice_match	TTF2	ENST00000369466.8	9462	23	24	6030	24	-233	multi-exon	FALSE	canonical	1	100507	junction_2	47146.29669794414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3387	21	3407	65.0	0	True	AAGAAA	-16
PB.11625.82	chr9	-	2063	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	15	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	682443.6565453103	NA	3	1	TRUE	NA	NA	NA	B	coding	458	1377	191	1567	10.0	363	False	AATAAA	-12
PB.570.3	chr1	+	5577	12	full-splice_match	SLC30A7	ENST00000370112.8	7898	12	4	2317	4	-2317	multi-exon	FALSE	canonical	1	83044	junction_11	40836.33750221782	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	184	1314	100.0	-40	True	AATACA	-19
PB.9536.1	chr5	-	4824	2	full-splice_match	SPRY4	ENST00000434127.2	2379	2	16	-2461	16	-71	multi-exon	FALSE	canonical	1	100768	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	299	900	229	1128	75.0	-4	True	NA	NA
PB.6509.2	chr2	+	3486	9	novel_not_in_catalog	SLC1A4	novel	766	6	NA	NA	2	-1018	any annotated donor/acceptor	FALSE	canonical	1	1941	junction_1	125077.62403697304	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	189	1787	5.0	0	True	ATTAAA	-25
PB.7371.1	chr20	+	2887	7	full-splice_match	TFAP2C	ENST00000201031.2	2866	7	-24	3	-24	-3	multi-exon	TRUE	canonical	1	98767	junction_2	32778.0184049548	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	268	1620	25.0	0	True	AATAAA	-21
PB.7371.2	chr20	+	2973	6	novel_in_catalog	TFAP2C	novel	2866	7	NA	NA	4	-3	intron_retention	FALSE	canonical	1	106985	junction_1	31528.477571871434	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	240	1706	25.0	0	True	AATAAA	-21
PB.11109.13	chr8	-	2300	12	incomplete-splice_match	PLAT	ENST00000220809.8	2706	14	159	3854	0	996	3prime_fragment	FALSE	canonical	1	466569	junction_6	67869.46686699342	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	99	1577	15.0	-1	True	TATAAA	-18
PB.7916.10	chr3	+	5010	24	novel_in_catalog	SETD5	novel	1824	10	NA	NA	8	-195	combination_of_known_junctions	FALSE	canonical	1	80905	junction_4	150429.96074872187	NA	2	NA	TRUE	NA	NA	NA	C	coding	1288	3864	1147	5010	20.0	8	True	NA	NA
PB.3426.8	chr14	-	3839	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	-1	-465	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	87387.74622166653	NA	6	2	TRUE	NA	NA	NA	B	coding	845	2538	273	2810	70.0	-10	True	NA	NA
PB.3426.9	chr14	-	3058	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	0	-1245	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	87387.74622166653	NA	1	1	TRUE	NA	NA	NA	B	coding	845	2538	272	2809	30.0	-9	True	AATAAA	-29
PB.3426.6	chr14	-	3990	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	6	-307	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	87387.74622166653	NA	1	1	TRUE	NA	NA	NA	B	coding	845	2538	266	2803	20.0	-3	True	ATTAAA	-13
PB.3426.7	chr14	-	4038	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	7	-306	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	90373.33552279172	NA	1	1	TRUE	NA	NA	NA	B	coding	845	2538	313	2850	20.0	-2	True	ATTAAA	-14
PB.3426.4	chr14	-	4423	33	novel_not_in_catalog	MAP4K5	novel	4812	18	NA	NA	4	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	113939.26078231812	NA	3	1	TRUE	NA	NA	NA	B	coding	853	2562	268	2829	40.0	-5	True	AATAAA	-16
PB.10645.5	chr7	+	3827	19	novel_not_in_catalog	DMTF1	novel	3801	18	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	13834	junction_5	131404.18140010652	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	539	2644	30.0	-369	False	AATAAA	-15
PB.3426.2	chr14	-	4289	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	64	2	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	90373.33552279172	NA	1	1	TRUE	NA	NA	NA	B	coding	845	2538	256	2793	40.0	23	True	AATAAA	-16
PB.3426.3	chr14	-	4230	32	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	-68	-4	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_9	87387.74622166653	NA	1	1	TRUE	NA	NA	NA	B	coding	845	2538	203	2740	50.0	28	True	AATAAA	-10
PB.3426.1	chr14	-	3265	32	novel_not_in_catalog	CDKL1	novel	2982	20	NA	NA	-116160	-5202	any annotated donor/acceptor	FALSE	canonical	1	4008	junction_1	102787.50644891348	NA	1	1	TRUE	NA	NA	NA	A	coding	817	2454	284	2737	15.0	-21	True	AATAAA	-18
PB.1893.16	chr11	+	2350	6	novel_in_catalog	CD44	novel	4589	9	NA	NA	0	13	intron_retention	FALSE	canonical	1	140919	junction_5	1172889.7404954995	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	135	953	35.0	-1	True	AATAAA	-33
PB.1893.17	chr11	+	1536	5	incomplete-splice_match	CD44	ENST00000525211.6	874	7	-90	17335	1	373	3prime_fragment	FALSE	canonical	1	1917379	junction_1	550568.470809206	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	133	888	25.0	1	True	ATTAAA	-19
PB.1893.14	chr11	+	4684	12	full-splice_match	CD44	ENST00000433892.6	2292	12	-18	-2374	0	-1	multi-exon	FALSE	canonical	1	133097	junction_5	1269208.2691056195	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	135	1616	35.0	-1	True	ATTAAA	-31
PB.1893.15	chr11	+	3595	8	novel_not_in_catalog	CD44	novel	4589	9	NA	NA	0	-10	intron_retention	FALSE	canonical	1	8081	junction_6	1357364.2137191282	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	135	1199	50.0	-1	True	AATAAA	-10
PB.1893.12	chr11	+	2310	12	full-splice_match	CD44	ENST00000433892.6	2292	12	-19	1	-1	-1	multi-exon	FALSE	canonical	1	133097	junction_5	1269208.2691056195	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	136	1617	10.0	-2	True	AATAAA	-23
PB.1893.13	chr11	+	4932	14	novel_in_catalog	CD44	novel	4589	9	NA	NA	-1	-12	combination_of_known_junctions	FALSE	canonical	1	62588	junction_6	1358678.7026131079	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	136	1875	55.0	-2	True	ATTAAA	-20
PB.1893.10	chr11	+	3774	5	incomplete-splice_match	CD44	ENST00000525211.6	874	7	-93	15100	-1	2608	3prime_fragment	FALSE	canonical	1	1917379	junction_1	550568.470809206	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	136	891	15.0	-2	True	AATAAA	-15
PB.1893.11	chr11	+	2697	6	novel_not_in_catalog	CD44	novel	4589	9	NA	NA	-1	773	intron_retention	FALSE	canonical	1	1798	junction_5	1223618.8263580126	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	136	1074	35.0	-2	True	AATAAA	-15
PB.565.1	chr1	-	4094	11	full-splice_match	DBT	ENST00000370132.8	10799	11	1	6704	1	-6704	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	14	1462	75.0	0	True	NA	NA
PB.6509.9	chr2	+	2213	6	novel_not_in_catalog	SLC1A4	novel	766	6	NA	NA	-30	-3653	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	167452.54031229267	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	274	1269	60.0	-28	True	ATTAAA	-4
PB.7896.5	chr22	-	2704	19	full-splice_match	CPT1B	ENST00000395650.6	2662	19	-42	0	-32	0	multi-exon	FALSE	canonical	1	15236	junction_18	108381.95207792772	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	132	2450	15.0	4501	False	AATAAA	-25
PB.7896.4	chr22	-	2755	20	novel_in_catalog	CPT1B	novel	2647	19	NA	NA	-14	3	intron_retention	FALSE	canonical	1	15236	junction_19	121822.72910742089	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	1263	2498	10.0	-5	True	AATAAA	-28
PB.7804.12	chr22	+	2627	21	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5563	19640	no_combination_of_known_junctions	FALSE	canonical	1	16484	junction_18	177276.82770328445	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	325	2283	30.0	-12	True	AATAAA	-16
PB.2492.1	chr12	+	922	4	full-splice_match	MGST1	ENST00000396210.7	914	4	-2	-6	-2	0	multi-exon	FALSE	canonical	1	2042212	junction_1	590256.0582769708	NA	0	NA	TRUE	NA	NA	NA	A	coding	155	468	87	554	10.0	-7	True	AATAAA	-15
PB.1893.19	chr11	+	1555	10	full-splice_match	CD44	ENST00000434472.6	1634	10	-119	198	3	0	multi-exon	FALSE	canonical	1	71892	junction_5	1181836.1701744734	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	131	1420	0.0	3	True	CATAAA	-14
PB.7964.12	chr3	-	5042	28	full-splice_match	ANKRD28	ENST00000624145.3	6383	28	-28	1369	-28	1187	multi-exon	FALSE	canonical	1	23935	junction_27	92495.81237662936	NA	1	NA	TRUE	NA	NA	NA	C	coding	899	2700	678	3377	40.0	7508	False	AATAAA	-22
PB.7804.13	chr22	+	3025	21	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5564	19636	intron_retention	FALSE	non_canonical	0	0	junction_6	190268.6718815988	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	716	1861	30.0	-11	True	AATAAA	-12
PB.2827.14	chr12	-	3545	15	incomplete-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-29	20616	-29	-7427	3prime_fragment	FALSE	canonical	1	107717	junction_3	33339.30847416776	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3303	243	3545	55.0	-13	True	NA	NA
PB.9159.7	chr5	+	2600	2	incomplete-splice_match	PURPL	ENST00000512067.5	1610	3	-16	8256	-16	-7296	3prime_fragment	FALSE	canonical	1	49009	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-25	True	NA	NA
PB.644.10	chr1	+	3849	23	full-splice_match	TTF2	ENST00000369466.8	9462	23	20	5593	20	111	multi-exon	FALSE	canonical	1	100507	junction_2	47146.29669794414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	25	3513	10.0	-4	True	AGTAAA	-14
PB.2827.15	chr12	-	2226	14	incomplete-splice_match	UHRF1BP1L	ENST00000279907.11	5168	21	-15	22203	-15	-9014	3prime_fragment	FALSE	canonical	1	107717	junction_2	30963.712423629928	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	1998	229	2226	55.0	1	True	NA	NA
PB.9159.6	chr5	+	6368	3	novel_in_catalog	PURPL	novel	1610	3	NA	NA	-16	2636	intron_retention	FALSE	canonical	1	14066	junction_2	17471.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-25	True	AATAAA	-15
PB.2756.7	chr12	+	4577	14	novel_in_catalog	CCT2	novel	2041	16	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2030286	junction_8	507192.757056296	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	1706	2800	15.0	0	True	AATAAA	-13
PB.2756.6	chr12	+	1911	16	full-splice_match	CCT2	ENST00000299300.10	2041	16	128	2	2	-2	multi-exon	FALSE	canonical	1	2030286	junction_9	476278.4552309523	NA	11	1	TRUE	NA	NA	NA	C	coding	535	1608	61	1668	15.0	3	True	AATAAA	-13
PB.2756.5	chr12	+	3369	15	novel_in_catalog	CCT2	novel	2041	16	NA	NA	-16	1	intron_retention	FALSE	canonical	1	2030286	junction_9	492227.9038488717	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	80	1594	15.0	-16	True	AATAAA	-11
PB.2756.4	chr12	+	1779	16	full-splice_match	CCT2	ENST00000299300.10	2041	16	107	155	15	-110	multi-exon	FALSE	canonical	1	2030286	junction_9	476278.4552309523	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	82	1689	20.0	-18	True	ATTAAA	-21
PB.2756.3	chr12	+	3152	15	novel_in_catalog	CCT2	novel	2041	16	NA	NA	15	1	intron_retention	FALSE	canonical	1	2030286	junction_8	489295.64820787887	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	1724	2911	15.0	-18	True	AATAAA	-11
PB.2756.2	chr12	+	3312	14	novel_in_catalog	CCT2	novel	2041	16	NA	NA	9	7	intron_retention	FALSE	canonical	1	2030286	junction_7	506653.7411545651	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	1873	3060	15.0	-24	True	AATAAA	-22
PB.2756.1	chr12	+	3232	15	incomplete-splice_match	CCT2	ENST00000299300.10	2041	16	97	2	5	-2	intron_retention	TRUE	canonical	1	2030286	junction_9	447097.25209422177	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	92	1702	15.0	-28	True	AATAAA	-13
PB.6910.58	chr2	-	2568	22	novel_in_catalog	STAT1	novel	4310	25	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	21618	junction_21	394182.9747910655	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	161	2299	35.0	-17	True	AATAAA	-15
PB.8706.8	chr4	+	2676	8	full-splice_match	CD38	ENST00000226279.7	5668	8	60	2932	26	1043	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	78	980	75.0	10	True	NA	NA
PB.8601.30	chr3	+	6031	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-70	-1874	-6	0	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	169	3105	35.0	2	True	ATTAAA	-16
PB.6910.55	chr2	-	2830	23	full-splice_match	STAT1	ENST00000392322.7	2716	23	-8	-106	-8	106	multi-exon	FALSE	canonical	1	957747	junction_22	256526.92373309852	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	315	2453	50.0	-17	True	TATAAA	-7
PB.9159.4	chr5	+	3341	5	novel_not_in_catalog	PURPL	novel	1610	3	NA	NA	-21	1475	any annotated donor/acceptor	FALSE	canonical	1	5516	junction_3	17383.04510866839	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-30	True	AATAAA	-15
PB.10615.3	chr7	+	1546	5	novel_in_catalog	STAG3L1	novel	1192	8	NA	NA	17	-479	intron_retention	FALSE	canonical	1	2403	junction_3	2923.0055593515385	NA	6	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-20	False	NA	NA
PB.6910.52	chr2	-	4614	24	incomplete-splice_match	STAT1	ENST00000361099.7	4310	25	94	3714	12	-2166	3prime_fragment	FALSE	canonical	1	957747	junction_23	255440.71553318566	NA	2	NA	TRUE	NA	NA	NA	C	coding	791	2376	295	2670	85.0	3	True	ATTAAA	-39
PB.2756.9	chr12	+	2731	16	novel_not_in_catalog	CCT2	novel	2041	16	NA	NA	0	6	any annotated donor/acceptor	FALSE	canonical	1	9367	junction_6	845355.95657038	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	1350	2480	15.0	0	True	AATAAA	-21
PB.2756.8	chr12	+	4286	15	novel_in_catalog	CCT2	novel	2041	16	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2030286	junction_8	473022.3691967593	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	3164	4042	15.0	0	True	AATAAA	-14
PB.7804.18	chr22	+	3319	19	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5586	19647	intron_retention	FALSE	canonical	1	341256	junction_7	98904.58198238902	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	184	1908	15.0	11	True	AATAAA	-23
PB.7804.19	chr22	+	3161	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5586	19637	intron_retention	FALSE	canonical	1	341256	junction_7	96629.14442039878	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	184	2175	30.0	11	True	AATAAA	-13
PB.644.11	chr1	+	3592	23	full-splice_match	TTF2	ENST00000369466.8	9462	23	23	5847	23	-50	multi-exon	FALSE	canonical	1	100507	junction_2	47146.29669794414	NA	1	NA	TRUE	NA	NA	NA	C	coding	1162	3489	22	3510	15.0	-1	True	NA	NA
PB.7211.18	chr20	+	2787	15	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-5	-11	combination_of_known_junctions	FALSE	canonical	1	124894	junction_2	206672.58483304316	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	253	1584	5.0	-13	True	AATAAA	-18
PB.11695.1	chr9	-	2598	4	novel_not_in_catalog	ZYG11AP1	novel	837	2	NA	NA	-40499	113092	any annotated donor/acceptor	FALSE	canonical	1	31	junction_1	101.21594077350991	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	2506	False	NA	NA
PB.9159.9	chr5	+	2526	2	incomplete-splice_match	PURPL	ENST00000512067.5	1610	3	178	8136	163	-7176	3prime_fragment	FALSE	canonical	1	49009	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-398	False	NA	NA
PB.7211.19	chr20	+	2264	14	full-splice_match	ENTPD6	ENST00000354989.9	2708	14	36	408	-1	-408	multi-exon	FALSE	canonical	1	76782	junction_1	177953.6444318905	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	170	1540	10.0	1	True	NA	NA
PB.47.2	chr1	-	1905	5	novel_not_in_catalog	C1orf174	novel	2517	5	NA	NA	5	-14	any annotated donor/acceptor	FALSE	canonical	1	4014	junction_3	190434.23008088645	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	320	1084	45.0	15	True	AATAAA	-11
PB.47.3	chr1	-	1775	5	novel_not_in_catalog	C1orf174	novel	2517	5	NA	NA	-7	-14	any annotated donor/acceptor	FALSE	canonical	1	8399	junction_3	189350.44233824091	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	69	407	45.0	3	True	AATAAA	-11
PB.747.4	chr1	-	3802	10	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	48756	junction_9	138041.17793355702	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	920	2257	5.0	13	True	NA	NA
PB.6829.1	chr2	-	5041	21	full-splice_match	TLK1	ENST00000431350.6	5663	21	-316	938	-249	393	multi-exon	TRUE	canonical	1	68642	junction_15	120796.37118700006	NA	3	NA	TRUE	NA	NA	NA	C	coding	766	2301	722	3022	35.0	31	True	CATAAA	-23
PB.747.2	chr1	-	3851	10	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	62823	junction_9	133824.57326646184	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	969	2306	5.0	360	False	NA	NA
PB.747.3	chr1	-	3514	11	full-splice_match	RFX5	ENST00000452671.6	2355	11	70	-1229	5	-91	multi-exon	FALSE	canonical	1	254587	junction_10	74785.89628298908	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	209	2059	45.0	-40	True	AAGAAA	-28
PB.47.4	chr1	-	1623	4	full-splice_match	C1orf174	ENST00000361605.3	1666	4	29	14	-9	-14	multi-exon	FALSE	canonical	1	265257	junction_2	86056.50164087933	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	71	802	45.0	1	True	AATAAA	-11
PB.765.5	chr1	-	4150	7	novel_in_catalog	ILF2	novel	1906	14	NA	NA	-1	2	intron_retention	FALSE	canonical	1	1632815	junction_4	776370.6123721703	NA	2	1	TRUE	NA	NA	NA	C	coding	187	564	62	625	0.0	3	True	ATTAAA	-18
PB.6829.6	chr2	-	4429	22	novel_in_catalog	TLK1	novel	5663	21	NA	NA	25	-14	combination_of_known_junctions	FALSE	canonical	1	34270	junction_19	128403.27180792393	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	1168	2817	55.0	-5	True	AATAAA	-19
PB.747.8	chr1	-	3648	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-12	-1	intron_retention	TRUE	canonical	1	17524	junction_5	148246.45917053128	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	766	2103	5.0	-16	True	NA	NA
PB.3368.6	chr14	+	2596	11	full-splice_match	COCH	ENST00000216361.9	2582	11	22	-36	1	36	multi-exon	FALSE	canonical	1	6177	junction_2	93543.39497473885	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	404	2251	35.0	4	True	AATAAA	-21
PB.7211.14	chr20	+	2683	14	full-splice_match	ENTPD6	ENST00000354989.9	2708	14	19	6	-8	-6	multi-exon	FALSE	canonical	1	76782	junction_1	177953.6444318905	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	187	1557	5.0	-16	True	AATAAA	-23
PB.11357.11	chr8	-	4491	32	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-87	2	combination_of_known_junctions	FALSE	canonical	1	9393	junction_31	125001.34397258765	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	267	3425	15.0	-21	True	ATTAAA	-20
PB.6829.4	chr2	-	4653	22	novel_in_catalog	TLK1	novel	5663	21	NA	NA	-92	93	combination_of_known_junctions	FALSE	canonical	1	34270	junction_19	128403.27180792393	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	1285	2934	40.0	-100	True	AATAAA	-17
PB.8170.9	chr3	+	3619	15	full-splice_match	GNL3	ENST00000418458.5	2040	15	89	-1668	4	1668	multi-exon	FALSE	canonical	1	1036169	junction_6	357811.9196981374	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	85	1734	20.0	-23	True	AATAAA	-17
PB.5210.28	chr17	+	3716	12	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98710	7801	no_combination_of_known_junctions	FALSE	canonical	1	653	junction_1	862438.4732345494	NA	1	NA	TRUE	NA	NA	NA	B	coding	381	1146	270	1415	55.0	20	True	AATAAA	-9
PB.6829.5	chr2	-	4300	21	full-splice_match	TLK1	ENST00000431350.6	5663	21	17	1346	17	-15	multi-exon	FALSE	canonical	1	68642	junction_15	120796.37118700006	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	389	2689	55.0	-26	True	AATAAA	-18
PB.7211.16	chr20	+	2880	16	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-7	-18	no_combination_of_known_junctions	FALSE	canonical	1	3758	junction_1	247354.4578596652	NA	2	1	TRUE	NA	NA	NA	C	coding	443	1332	353	1684	5.0	-15	True	AATAAA	-11
PB.5210.29	chr17	+	2940	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	23	1293	0	-621	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	106	1251	55.0	20	True	AAGAAA	-30
PB.1426.4	chr10	+	1747	1	full-splice_match	ADO	ENST00000373783.2	3627	1	1877	3	1877	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-9795	False	AATAAA	-25
PB.689.1	chr1	-	3061	21	novel_not_in_catalog	NBPF10	novel	13042	90	NA	NA	-84233	-56020	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	1498.3766707674013	NA	0	NA	TRUE	NA	NA	NA	B	coding	570	1710	1351	3060	65.0	-38	True	AAGAAA	-26
PB.7211.17	chr20	+	2248	12	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-6	-16	combination_of_known_junctions	FALSE	canonical	1	19588	junction_2	257280.35043685144	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	289	1050	5.0	-14	True	AATAAA	-13
PB.1426.1	chr10	+	3245	1	full-splice_match	ADO	ENST00000373783.2	3627	1	377	5	377	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	183	552	88	639	35.0	40	False	AATAAA	-23
PB.1426.2	chr10	+	2132	1	full-splice_match	ADO	ENST00000373783.2	3627	1	348	1147	348	-1147	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	183	552	117	668	15.0	11	True	AATAAA	-34
PB.1426.3	chr10	+	4187	1	full-splice_match	ADO	ENST00000373783.2	3627	1	338	-898	338	898	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	183	552	127	678	85.0	1	True	NA	NA
PB.6596.1	chr2	+	654	3	full-splice_match	VAMP5	ENST00000306384.4	689	3	11	24	11	-24	multi-exon	FALSE	canonical	1	462688	junction_1	108750.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	116	351	73	423	25.0	-32	True	AGTAAA	-15
PB.7211.10	chr20	+	2631	15	full-splice_match	ENTPD6	ENST00000376652.8	2750	15	102	17	-17	-17	multi-exon	FALSE	canonical	1	124894	junction_2	192556.01268478017	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	146	1516	5.0	-8	True	AATAAA	-12
PB.689.3	chr1	-	1878	6	full-splice_match	NOTCH2NLA	ENST00000579793.6	1954	6	-18	94	-18	-94	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	381	1073	35.0	-45	True	NA	NA
PB.7211.11	chr20	+	2503	13	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	1	19588	junction_4	273677.59405086894	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	261	1385	5.0	-24	True	AATAAA	-15
PB.1274.3	chr10	+	2649	12	full-splice_match	NET1	ENST00000355029.8	3402	12	6	747	6	-747	multi-exon	FALSE	canonical	1	121573	junction_1	273030.74703546445	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	137	1927	20.0	0	True	ATTAAA	-17
PB.3861.5	chr15	-	2763	9	novel_not_in_catalog	GABPB1	novel	4816	9	NA	NA	-10	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	114452.22893198716	NA	2	1	TRUE	NA	NA	NA	C	coding	395	1188	202	1389	25.0	-1	True	ATTAAA	-15
PB.1274.1	chr10	+	3149	12	full-splice_match	NET1	ENST00000355029.8	3402	12	6	247	6	-247	multi-exon	FALSE	canonical	1	121573	junction_1	273030.74703546445	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	137	1927	40.0	0	True	NA	NA
PB.7076.16	chr2	+	5863	30	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	-2	-21	combination_of_known_junctions	FALSE	canonical	1	71305	junction_2	96660.68491056387	NA	1	NA	TRUE	NA	NA	NA	C	coding	1299	3900	237	4136	75.0	5	True	NA	NA
PB.8170.8	chr3	+	2269	13	novel_in_catalog	GNL3	novel	547	6	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1036169	junction_6	367798.8420024649	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	86	814	40.0	-24	True	AATAAA	-18
PB.7076.10	chr2	+	3638	27	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	3496	junction_3	116078.18503361527	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3273	366	3638	80.0	-6	True	NA	NA
PB.7076.13	chr2	+	2644	21	incomplete-splice_match	GIGYF2	ENST00000373563.8	5847	29	21	38686	-2	-56	3prime_fragment	FALSE	canonical	1	153177	junction_2	78371.67331075367	NA	7	1	TRUE	NA	NA	NA	C	coding	823	2469	175	2643	55.0	-3	True	NA	NA
PB.3861.4	chr15	-	2709	9	full-splice_match	GABPB1	ENST00000220429.12	2726	9	27	-10	-2	10	multi-exon	FALSE	canonical	1	127281	junction_8	86529.92423569072	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	143	1330	20.0	-9	True	ATTAAA	-20
PB.11196.2	chr8	-	2685	4	full-splice_match	PEX2	ENST00000357039.8	4317	4	148	1484	148	1192	multi-exon	FALSE	canonical	1	414084	junction_3	42183.25592775724	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	249	1166	35.0	-1	True	TATAAA	-14
PB.1329.1	chr10	+	2584	1	novel_in_catalog	SPAG6	novel	557	4	NA	NA	44852	-14984	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	128	387	658	1044	35.0	-418	False	AATAAA	-20
PB.7211.13	chr20	+	2363	13	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	1	62183	junction_1	186097.10591716107	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	436	1236	10.0	-17	True	AATAAA	-24
PB.7076.19	chr2	+	3550	26	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	14710	junction_3	108241.4468794648	NA	1	1	TRUE	NA	NA	NA	C	coding	1090	3270	279	3548	80.0	11	True	NA	NA
PB.3861.7	chr15	-	2730	9	novel_not_in_catalog	GABPB1	novel	4816	9	NA	NA	-13	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	107752.5185862841	NA	1	1	TRUE	NA	NA	NA	C	coding	383	1152	205	1356	25.0	-4	True	ATTAAA	-15
PB.11196.4	chr8	-	2359	3	full-splice_match	PEX2	ENST00000522527.5	1627	3	161	-893	120	870	multi-exon	FALSE	canonical	1	65851	junction_2	219589.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	245	1162	35.0	-29	True	AATAAA	-20
PB.689.4	chr1	-	4054	1	novel_in_catalog	AC239799.1	novel	3411	21	NA	NA	76105	-35190	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	144	435	1457	1891	95.0	7972	False	AATAAA	-42
PB.6800.1	chr2	-	3967	6	full-splice_match	CD302	ENST00000259053.5	3741	6	-3	-223	-3	0	multi-exon	FALSE	canonical	1	128616	junction_5	62729.581374659276	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	48	746	20.0	-4	True	AATAAA	-14
PB.5210.27	chr17	+	3701	12	full-splice_match	PRKAR1A	ENST00000536854.6	3697	12	0	-4	0	4	multi-exon	FALSE	canonical	1	17540	junction_1	859381.9360246186	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	239	1384	30.0	20	True	AATAAA	-25
PB.3861.1	chr15	-	4561	9	full-splice_match	GABPB1	ENST00000380877.7	4816	9	256	-1	1	1	multi-exon	FALSE	canonical	1	127281	junction_8	74837.11197984844	NA	4	NA	TRUE	NA	NA	NA	C	coding	383	1152	169	1320	35.0	10	True	AATAAA	-15
PB.11031.1	chr8	-	1950	2	full-splice_match	AC107959.1	ENST00000502083.2	1945	2	-11	6	-11	-6	multi-exon	FALSE	canonical	1	18628	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	106	321	554	874	25.0	-3	True	NA	NA
PB.7929.1	chr3	-	1552	8	full-splice_match	EMC3	ENST00000245046.6	2777	8	269	956	-13	-956	multi-exon	FALSE	canonical	1	864013	junction_7	201036.2414247841	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	191	976	85.0	-15	True	NA	NA
PB.7929.2	chr3	-	1093	8	full-splice_match	EMC3	ENST00000245046.6	2777	8	268	1416	-14	-1416	multi-exon	FALSE	canonical	1	864013	junction_7	201036.2414247841	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	192	977	15.0	-16	True	AATAAA	-30
PB.6934.4	chr2	+	2357	12	novel_in_catalog	SPATS2L	novel	584	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	21245	junction_1	265734.9099474764	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	183	1859	15.0	-84	False	ATTAAA	-15
PB.757.1	chr1	+	2318	4	novel_not_in_catalog	AL450992.2	novel	506	3	NA	NA	-1959	1164	any annotated donor/acceptor	FALSE	canonical	1	1008	junction_1	19065.478593520802	NA	0	NA	TRUE	NA	NA	NA	A	coding	122	369	1	369	25.0	-1907	False	NA	NA
PB.689.9	chr1	-	1118	5	full-splice_match	NOTCH2NLA	ENST00000362074.7	1874	5	9	747	9	-747	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	354	1064	30.0	-18	True	AATAAA	-23
PB.11555.4	chr9	-	2660	14	incomplete-splice_match	CNTNAP3	ENST00000297668.10	5064	24	-173	45160	4	0	3prime_fragment	FALSE	canonical	1	41	junction_4	21998.41696348645	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	248	2488	30.0	NA	False	ATTAAA	-11
PB.4715.1	chr17	+	1639	1	full-splice_match	C17orf100	ENST00000542475.2	1756	1	-60	177	-60	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	118	357	257	613	25.0	-4	True	NA	NA
PB.5210.22	chr17	+	1850	5	full-splice_match	PRKAR1A	ENST00000585460.1	680	5	-8	-1162	-4	336	multi-exon	FALSE	canonical	1	722815	junction_1	425478.70727511146	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	134	733	95.0	-8	True	NA	NA
PB.689.8	chr1	-	1453	5	full-splice_match	NOTCH2NLA	ENST00000362074.7	1874	5	5	416	5	-416	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	358	1068	70.0	-22	True	NA	NA
PB.8473.41	chr3	+	4048	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	58	-974	no_combination_of_known_junctions	FALSE	canonical	1	22145	junction_1	338956.2341305299	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	1037	2185	70.0	-879	False	AATGAA	-7
PB.3861.2	chr15	-	3761	9	novel_in_catalog	GABPB1	novel	4816	9	NA	NA	-12	-809	combination_of_known_junctions	FALSE	canonical	1	24107	junction_3	107523.88119964037	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	182	1330	35.0	-3	True	AATAAA	-33
PB.12290.4	chrX	-	2135	13	incomplete-splice_match	MAP7D3	ENST00000316077.13	4567	19	165	9158	-32	-3576	3prime_fragment	FALSE	canonical	1	94488	junction_12	35618.4504365364	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2076	60	2135	60.0	-35	True	AATAAA	-26
PB.7079.6	chr2	+	6409	31	novel_not_in_catalog	DGKD	novel	6297	30	NA	NA	-2	1	any annotated donor/acceptor	FALSE	canonical	1	8598	junction_2	81328.24782779283	NA	8	1	TRUE	NA	NA	NA	C	coding	1081	3246	527	3772	20.0	2	True	AATAAA	-23
PB.7079.7	chr2	+	3289	28	novel_not_in_catalog	DGKD	novel	6297	30	NA	NA	1525	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	68391.51294008049	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3195	95	3289	75.0	-1064	False	NA	NA
PB.3416.5	chr14	+	1723	13	full-splice_match	KLHDC2	ENST00000298307.9	5514	13	544	3247	-2	16	multi-exon	FALSE	canonical	1	452831	junction_1	87046.2006171946	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	318	1538	25.0	-1	True	AATAAA	-15
PB.3416.4	chr14	+	2226	11	novel_in_catalog	KLHDC2	novel	5514	13	NA	NA	-4	15	intron_retention	FALSE	canonical	1	452831	junction_1	90517.41306953043	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	344	1093	30.0	-27	True	AATAAA	-14
PB.3416.3	chr14	+	2618	10	novel_in_catalog	KLHDC2	novel	5514	13	NA	NA	-14	17	intron_retention	FALSE	canonical	1	452831	junction_1	87222.89634219324	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	354	1103	25.0	-37	True	AATAAA	-16
PB.3416.2	chr14	+	1849	12	full-splice_match	KLHDC2	ENST00000555443.5	1756	12	-71	-22	-33	15	multi-exon	FALSE	canonical	1	452831	junction_1	90916.78588923912	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	373	1122	30.0	2	True	AATAAA	-14
PB.3416.1	chr14	+	1781	13	novel_not_in_catalog	KLHDC2	novel	5514	13	NA	NA	-34	-495	any annotated donor/acceptor	FALSE	canonical	1	25126	junction_12	193040.84168317853	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	374	1480	90.0	1	True	NA	NA
PB.1964.31	chr11	+	1463	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	42	1826	0	34	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	112	1005	70.0	4	True	NA	NA
PB.12290.2	chrX	-	2936	19	full-splice_match	MAP7D3	ENST00000316077.13	4567	19	192	1439	-5	1377	multi-exon	FALSE	canonical	1	94488	junction_18	43176.10200170609	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	33	2660	35.0	-8	True	AGTAAA	-23
PB.5839.1	chr19	+	3472	5	full-splice_match	PGPEP1	ENST00000269919.10	7092	5	11	3609	0	1999	multi-exon	FALSE	canonical	1	121320	junction_4	16572.371631724895	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	85	714	5.0	0	True	NA	NA
PB.5839.2	chr19	+	2459	3	novel_not_in_catalog	PGPEP1	novel	7092	5	NA	NA	1	-12132	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	74751.5	NA	23	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.7079.9	chr2	+	3452	28	novel_in_catalog	DGKD	novel	6297	30	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	1	6603	junction_1	67444.61034388855	NA	1	NA	TRUE	NA	NA	NA	C	coding	1080	3240	213	3452	75.0	-8750	False	NA	NA
PB.696.12	chr1	+	1779	15	novel_not_in_catalog	GPR89B	novel	1934	14	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	canonical	1	164	junction_14	17815.75901356975	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	116	1483	20.0	0	True	ATTAAA	-13
PB.8366.1	chr3	-	2379	11	full-splice_match	SLC41A3	ENST00000360370.8	2169	11	-215	5	-20	-2	multi-exon	FALSE	canonical	1	77843	junction_10	111420.4835844828	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	260	1723	25.0	-1	True	AATAAA	-18
PB.5638.14	chr19	+	2635	19	incomplete-splice_match	SAFB	ENST00000292123.9	3042	21	18511	10	-241	2	5prime_fragment	FALSE	canonical	1	229764	junction_16	349628.91008651437	NA	1	NA	TRUE	NA	NA	NA	C	coding	787	2364	95	2458	30.0	-299	False	AATAAA	-16
PB.8366.3	chr3	-	2544	12	novel_in_catalog	SLC41A3	novel	2169	11	NA	NA	-33	-1	intron_retention	FALSE	canonical	1	1585	junction_10	177023.12405805272	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	273	1892	15.0	-14	False	AATAAA	-14
PB.2914.1	chr12	-	2630	1	incomplete-splice_match	NAA25	ENST00000261745.8	6010	24	79694	10	6077	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	TATAAA	-12
PB.12290.1	chrX	-	4378	19	full-splice_match	MAP7D3	ENST00000316077.13	4567	19	182	7	-15	2	multi-exon	FALSE	canonical	1	94488	junction_18	43176.10200170609	NA	1	NA	TRUE	NA	NA	NA	C	coding	875	2628	43	2670	35.0	-18	True	AATAAA	-11
PB.6800.3	chr2	-	2126	1	novel_in_catalog	CD302	novel	3803	5	NA	NA	-4	-27268	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-5	True	AATAAA	-35
PB.1042.2	chr1	-	3333	12	full-splice_match	KLHL12	ENST00000367261.7	3359	12	3	23	3	-7	multi-exon	FALSE	canonical	1	63468	junction_3	41475.50525608982	NA	3	NA	TRUE	NA	NA	NA	C	coding	568	1707	217	1923	25.0	-26	True	ATTAAA	-14
PB.2314.12	chr11	-	4566	26	novel_not_in_catalog	HYOU1	novel	4529	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	15496	junction_4	416409.5907592447	NA	1	NA	TRUE	NA	NA	NA	C	coding	904	2715	131	2845	10.0	-9	True	AATAAA	-15
PB.1964.30	chr11	+	2392	5	novel_in_catalog	MS4A1	novel	495	3	NA	NA	2	80	intron_retention	FALSE	canonical	1	263820	junction_2	337785.23787783785	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	377	970	45.0	2	True	ATTAAA	-15
PB.1042.3	chr1	-	3048	10	novel_in_catalog	KLHL12	novel	3359	12	NA	NA	6	-2	no_combination_of_known_junctions	FALSE	canonical	1	9912	junction_4	57465.299477162735	NA	3	NA	TRUE	NA	NA	NA	C	coding	467	1404	214	1617	35.0	-23	True	ATTAAA	-35
PB.7065.5	chr2	+	2314	20	novel_in_catalog	ARMC9	novel	2300	21	NA	NA	26	-7	combination_of_known_junctions	FALSE	canonical	1	15963	junction_8	53648.04496348803	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	315	2213	35.0	38	True	AATAAA	-13
PB.7065.4	chr2	+	2179	21	full-splice_match	ARMC9	ENST00000349938.8	2300	21	121	0	24	0	multi-exon	FALSE	canonical	1	45646	junction_6	42652.137773387156	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	74	2071	10.0	36	True	AATAAA	-20
PB.7065.7	chr2	+	2271	16	novel_in_catalog	ARMC9	novel	2300	21	NA	NA	33	415	combination_of_known_junctions	FALSE	canonical	1	28650	junction_1	47520.28836220028	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	308	2032	10.0	45	True	NA	NA
PB.7065.6	chr2	+	2610	23	novel_not_in_catalog	ARMC9	novel	2300	21	NA	NA	33	6310	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	58415.08046221476	NA	1	1	TRUE	NA	NA	NA	C	coding	683	2052	308	2359	40.0	45	True	NA	NA
PB.7065.1	chr2	+	3421	25	novel_in_catalog	ARMC9	novel	2300	21	NA	NA	-16	167	combination_of_known_junctions	FALSE	canonical	1	15299	junction_24	56922.96815652065	NA	2	NA	TRUE	NA	NA	NA	C	coding	818	2457	114	2570	20.0	-4	True	NA	NA
PB.7533.3	chr21	-	6782	3	novel_in_catalog	ZBTB21	novel	6846	4	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	30861	junction_1	15031.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	865	2598	123	2720	25.0	-7	True	AATAAA	-21
PB.7065.3	chr2	+	5457	24	novel_in_catalog	ARMC9	novel	2300	21	NA	NA	3	-297	combination_of_known_junctions	FALSE	canonical	1	15299	junction_23	61871.14559816627	NA	2	NA	TRUE	NA	NA	NA	C	coding	785	2358	95	2452	85.0	15	True	NA	NA
PB.7065.2	chr2	+	2101	20	novel_in_catalog	ARMC9	novel	2300	21	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	15963	junction_8	51458.132008948945	NA	5	2	TRUE	NA	NA	NA	C	coding	632	1899	98	1996	15.0	12	True	AATAAA	-17
PB.8570.3	chr3	-	4438	2	full-splice_match	C3orf70	ENST00000335012.2	5901	2	-13	1476	-13	-1476	multi-exon	FALSE	canonical	1	30523	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	205	957	20.0	27	True	ATTAAA	-20
PB.3879.31	chr15	-	1157	4	full-splice_match	ARPP19	ENST00000566423.5	5362	4	63	4142	-9	74	multi-exon	FALSE	canonical	1	239423	junction_3	154353.61531885155	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	72	410	35.0	26	False	AATACA	-21
PB.7533.5	chr21	-	5975	2	full-splice_match	ZBTB21	ENST00000398511.3	5608	2	39	-406	9	406	multi-exon	FALSE	canonical	1	60924	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	1066	3201	111	3311	35.0	5	True	AATATA	-16
PB.6800.2	chr2	-	3753	6	full-splice_match	CD302	ENST00000259053.5	3741	6	-12	0	1	0	multi-exon	FALSE	canonical	1	128616	junction_5	62729.581374659276	NA	4	NA	TRUE	NA	NA	NA	C	coding	232	699	57	755	45.0	132	False	AATAAA	-19
PB.8570.1	chr3	-	5921	2	full-splice_match	C3orf70	ENST00000335012.2	5901	2	-23	3	-23	-3	multi-exon	FALSE	canonical	1	30523	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	250	753	215	967	25.0	17	True	AATAAA	-27
PB.765.2	chr1	-	1845	14	full-splice_match	ILF2	ENST00000361891.8	1659	14	61	-247	-5	-1	multi-exon	FALSE	canonical	1	1632815	junction_11	1054185.8382748698	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	66	1238	25.0	-1	True	AATAAA	-18
PB.7533.4	chr21	-	7449	3	full-splice_match	ZBTB21	ENST00000310826.9	7449	3	-2	2	-2	-2	multi-exon	FALSE	canonical	1	13816	junction_1	2469.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	1066	3201	187	3387	25.0	-6	True	AATAAA	-21
PB.6405.6	chr2	+	2838	20	full-splice_match	TTC27	ENST00000317907.8	2876	20	36	2	2	-2	multi-exon	FALSE	canonical	1	122031	junction_5	37506.522434728795	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	196	2727	20.0	2	True	AATAAA	-16
PB.1964.33	chr11	+	4082	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-89	intron_retention	FALSE	canonical	1	599322	junction_1	265387.5413734413	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	1970	2581	65.0	4	True	NA	NA
PB.8818.8	chr4	-	2784	11	full-splice_match	RASSF6	ENST00000342081.7	4331	11	-68	1615	-68	-189	multi-exon	FALSE	canonical	1	4897	junction_10	14684.247778146486	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	200	1309	70.0	-69	False	NA	NA
PB.7533.7	chr21	-	4972	3	novel_in_catalog	ZBTB21	novel	6846	4	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	1	30861	junction_1	15031.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	865	2598	123	2720	40.0	-7	True	AATAAA	-12
PB.8818.4	chr4	-	4554	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	115	1325	-16	270	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	181	1194	35.0	-10	True	NA	NA
PB.8818.5	chr4	-	4111	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	125	1758	-6	-163	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	171	1184	65.0	0	True	NA	NA
PB.8818.6	chr4	-	2737	10	full-splice_match	RASSF6	ENST00000395777.6	2735	10	-23	21	-18	-21	multi-exon	FALSE	canonical	1	9426	junction_4	13439.702080949986	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	183	1094	65.0	-12	True	NA	NA
PB.3550.20	chr14	+	2081	10	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34891	-4	no_combination_of_known_junctions	FALSE	canonical	1	4185	junction_5	153856.32439301413	NA	0	NA	TRUE	NA	NA	NA	B	coding	215	648	204	851	5.0	3	True	AATAAA	-13
PB.11555.1	chr9	-	8050	24	full-splice_match	CNTNAP3	ENST00000297668.10	5064	24	-425	-2561	-248	2561	multi-exon	TRUE	canonical	1	41	junction_14	19072.384141358387	NA	2	NA	TRUE	NA	NA	NA	C	coding	1288	3867	500	4366	30.0	NA	False	NA	NA
PB.8818.1	chr4	-	5746	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	124	124	-7	-124	multi-exon	TRUE	canonical	1	33579	junction_2	6752.479334289	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	172	1185	55.0	-1	True	NA	NA
PB.8818.2	chr4	-	5788	11	novel_not_in_catalog	RASSF6	novel	5994	11	NA	NA	-27	-124	any annotated donor/acceptor	FALSE	canonical	1	2331	junction_1	15330.691535609216	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	192	1160	55.0	-21	True	NA	NA
PB.8818.3	chr4	-	4995	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	112	887	-19	708	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	184	1197	30.0	-13	True	NA	NA
PB.3428.1	chr14	-	8138	30	novel_in_catalog	NIN	novel	10293	31	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	1	48689	junction_29	92294.9904025557	NA	1	NA	TRUE	NA	NA	NA	C	coding	1420	4263	233	4495	15.0	-1	True	AATAAA	-14
PB.3428.2	chr14	-	10280	31	full-splice_match	NIN	ENST00000245441.9	10293	31	-40	53	-40	1	multi-exon	FALSE	canonical	1	48689	junction_30	100175.54101392326	NA	1	NA	TRUE	NA	NA	NA	C	coding	2133	6402	232	6633	15.0	0	True	AATAAA	-18
PB.730.11	chr1	-	1473	8	full-splice_match	CTSS	ENST00000368985.7	4107	8	203	2431	38	-60	multi-exon	FALSE	canonical	1	1078338	junction_4	276202.59509324835	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	59	1054	80.0	17	True	NA	NA
PB.11505.5	chr9	-	4072	26	full-splice_match	NOL6	ENST00000297990.8	4741	26	6	663	6	-1	multi-exon	FALSE	canonical	1	220949	junction_19	49827.92428646411	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3441	83	3523	20.0	-27	True	AATAGA	-16
PB.3428.8	chr14	-	7833	29	novel_not_in_catalog	NIN	novel	10293	31	NA	NA	-383	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_28	90646.2091549729	NA	6	1	TRUE	NA	NA	NA	C	coding	1198	3597	594	4190	15.0	-3	True	AATAAA	-14
PB.59.2	chr1	+	2823	4	novel_in_catalog	THAP3	novel	1366	6	NA	NA	3	-5	intron_retention	FALSE	canonical	1	42517	junction_2	52782.59645838663	NA	0	NA	TRUE	NA	NA	NA	B	coding	127	384	25	408	15.0	-6	True	AATAAA	-12
PB.59.1	chr1	+	1236	5	incomplete-splice_match	THAP3	ENST00000054650.8	1366	6	320	5	5	-5	5prime_fragment	FALSE	canonical	1	42517	junction_3	52918.12087732802	NA	0	NA	TRUE	NA	NA	NA	B	coding	239	720	34	753	15.0	-15	True	AATAAA	-12
PB.7562.4	chr21	-	2908	16	novel_in_catalog	ITGB2	novel	2125	7	NA	NA	-7	0	no_combination_of_known_junctions	FALSE	canonical	1	2118	junction_15	332555.8144223546	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	187	2496	20.0	7889	False	AATAAA	-24
PB.1042.8	chr1	-	5025	10	novel_in_catalog	KLHL12	novel	3359	12	NA	NA	53	-7	intron_retention	FALSE	canonical	1	33021	junction_1	47658.1824663929	NA	2	NA	TRUE	NA	NA	NA	C	coding	267	804	167	970	25.0	24	True	ATTAAA	-14
PB.11895.2	chr9	-	2352	9	novel_in_catalog	UBAC1	novel	1867	10	NA	NA	-11	4	intron_retention	FALSE	canonical	1	495772	junction_2	130936.85125949074	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	62	805	0.0	-6	True	AATAAA	-18
PB.11895.3	chr9	-	1737	10	full-splice_match	UBAC1	ENST00000371756.3	1867	10	132	-2	-36	2	multi-exon	FALSE	canonical	1	495772	junction_2	150887.6480269711	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	87	1304	0.0	161	False	AATAAA	-16
PB.278.6	chr1	+	4752	27	novel_in_catalog	ZMYM4	novel	6994	30	NA	NA	-278	-1765	no_combination_of_known_junctions	FALSE	canonical	1	22496	junction_2	99330.55904450895	NA	0	NA	TRUE	NA	NA	NA	C	coding	1224	3675	576	4250	50.0	-20	True	AATAAA	-16
PB.2929.7	chr12	-	3598	25	full-splice_match	RBM19	ENST00000392561.7	3574	25	-25	1	-25	-1	multi-exon	FALSE	canonical	1	81144	junction_1	45567.39136707301	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	109	2991	10.0	-11	True	NA	NA
PB.2929.6	chr12	-	4160	24	full-splice_match	RBM19	ENST00000261741.9	4194	24	36	-2	-25	-1	multi-exon	FALSE	canonical	1	150465	junction_4	33828.18281916546	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	109	2991	10.0	-11	True	NA	NA
PB.2929.5	chr12	-	3459	26	novel_not_in_catalog	RBM19	novel	1265	2	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	4425	junction_1	69583.19905639291	NA	2	NA	TRUE	NA	NA	NA	C	coding	960	2883	98	2980	45.0	0	True	AATAAA	-11
PB.2929.4	chr12	-	3717	26	novel_not_in_catalog	RBM19	novel	1265	2	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	1	10227	junction_1	68871.04179370601	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	116	2998	45.0	-18	True	AATAAA	-11
PB.2929.3	chr12	-	4263	26	novel_in_catalog	RBM19	novel	1265	2	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	1451	junction_1	69952.59114555799	NA	6	1	TRUE	NA	NA	NA	C	coding	960	2883	98	2980	45.0	0	True	AATAAA	-11
PB.2929.2	chr12	-	4893	26	novel_not_in_catalog	RBM19	novel	1265	2	NA	NA	-20	0	intron_retention	FALSE	canonical	1	2232	junction_1	63304.72482112532	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	104	2986	45.0	-6	True	AATAAA	-11
PB.2929.1	chr12	-	4466	25	full-splice_match	RBM19	ENST00000545145.6	4422	25	-36	-8	29	4	multi-exon	TRUE	canonical	1	17557	junction_1	55075.1269834965	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	116	2998	45.0	-18	True	AATAAA	-19
PB.12100.8	chrX	+	4551	12	novel_in_catalog	TRO	novel	1196	2	NA	NA	45	-3	intron_retention	FALSE	canonical	1	48	junction_1	50932.7470034978	NA	0	NA	TRUE	NA	NA	NA	C	coding	1387	4164	154	4317	20.0	-586	False	ATTAAA	-9
PB.278.2	chr1	+	6529	27	novel_in_catalog	ZMYM4	novel	6994	30	NA	NA	-296	-6	no_combination_of_known_junctions	TRUE	canonical	1	22496	junction_2	99330.55904450895	NA	0	NA	TRUE	NA	NA	NA	C	coding	1224	3675	594	4268	15.0	-38	True	AATAAA	-14
PB.3712.41	chr14	-	1958	4	novel_not_in_catalog	IGHV3-30	novel	431	2	NA	NA	1	2694	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	26133.252419092423	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	80	601	20.0	NA	False	AATAAA	-14
PB.2929.8	chr12	-	3097	25	novel_not_in_catalog	RBM19	novel	4422	25	NA	NA	-25	0	any annotated donor/acceptor	FALSE	canonical	1	1239	junction_1	57713.901336544346	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	109	2991	5.0	-11	True	NA	NA
PB.7679.4	chr22	-	1730	5	full-splice_match	XBP1	ENST00000216037.10	1850	5	19	101	-6	-67	multi-exon	FALSE	canonical	1	1740640	junction_4	662642.4307245198	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	55	840	30.0	-10	False	NA	NA
PB.7679.5	chr22	-	1618	6	novel_not_in_catalog	XBP1	novel	1850	5	NA	NA	3	-1	intron_retention	FALSE	canonical	1	24	junction_5	1199772.035308808	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	130	633	15.0	2	True	ATTAAA	-12
PB.7679.6	chr22	-	1714	5	full-splice_match	XBP1	ENST00000405219.7	1690	5	4	-28	4	-1	multi-exon	FALSE	canonical	1	16361	junction_4	1320708.952885982	NA	7	NA	TRUE	NA	NA	NA	C	coding	211	636	94	729	15.0	439	False	ATTAAA	-12
PB.7679.1	chr22	-	2746	5	full-splice_match	XBP1	ENST00000216037.10	1850	5	29	-925	1	925	multi-exon	FALSE	canonical	1	1740640	junction_4	662642.4307245198	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	45	830	80.0	0	True	NA	NA
PB.11357.16	chr8	-	4347	30	novel_in_catalog	PTK2	novel	4955	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	33109	junction_5	130594.99888025076	NA	0	NA	TRUE	NA	NA	NA	C	coding	1031	3096	191	3286	30.0	795	False	ATTAAA	-15
PB.7679.3	chr22	-	2699	4	novel_in_catalog	XBP1	novel	1850	5	NA	NA	4	-1	intron_retention	FALSE	canonical	1	1740640	junction_3	759259.3216472368	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	1489	2082	10.0	3	True	ATTAAA	-15
PB.10096.1	chr6	-	2438	20	full-splice_match	RARS2	ENST00000369536.9	1818	20	10	-630	10	630	multi-exon	TRUE	canonical	1	123437	junction_19	122553.21535647495	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1737	37	1773	40.0	-17	True	AATAAA	-16
PB.10096.2	chr6	-	2274	20	full-splice_match	RARS2	ENST00000369536.9	1818	20	-10	-446	-10	446	multi-exon	FALSE	canonical	1	123437	junction_19	122553.21535647495	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1737	57	1793	30.0	-37	False	AATAAA	-20
PB.5229.2	chr17	+	1844	6	full-splice_match	SLC9A3R1	ENST00000262613.9	1969	6	-23	148	-23	-91	multi-exon	FALSE	canonical	1	892974	junction_1	338094.54674430937	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	219	1295	25.0	1	True	NA	NA
PB.7679.8	chr22	-	1287	5	full-splice_match	XBP1	ENST00000216037.10	1850	5	4	559	4	61	multi-exon	FALSE	canonical	1	1740640	junction_4	662642.4307245198	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	70	855	20.0	-25	False	NA	NA
PB.7679.9	chr22	-	1778	1	novel_in_catalog	XBP1	novel	1850	5	NA	NA	3	117	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	141	426	43	468	100.0	2	True	NA	NA
PB.10096.6	chr6	-	2007	20	novel_not_in_catalog	RARS2	novel	1818	20	NA	NA	26	-6	any annotated donor/acceptor	FALSE	canonical	1	128809	junction_19	121965.65985289385	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	767	1978	30.0	-1	True	ATTAAA	-19
PB.10096.7	chr6	-	1975	19	novel_not_in_catalog	RARS2	novel	1818	20	NA	NA	16	-7	any annotated donor/acceptor	FALSE	canonical	1	3070	junction_15	168257.72699219565	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	736	1947	35.0	-11	True	ATTAAA	-18
PB.7933.4	chr3	+	1818	3	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	-9	1444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	17697.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	70	588	25.0	-12	True	ATTAAA	-17
PB.5999.1	chr19	-	5953	5	novel_in_catalog	ZNF780B	novel	8664	5	NA	NA	7	1845	intron_retention	FALSE	canonical	1	26212	junction_4	38757.63109617898	NA	0	NA	TRUE	NA	NA	NA	A	coding	833	2502	829	3330	35.0	18	True	ATTAAA	-6
PB.6419.8	chr2	-	3681	19	novel_not_in_catalog	PRKD3	novel	6111	19	NA	NA	23	-2438	any annotated donor/acceptor	FALSE	canonical	1	2606	junction_14	93886.42743025896	NA	0	NA	TRUE	NA	NA	NA	B	coding	626	1881	1567	3447	25.0	-14	True	TATAAA	-16
PB.7933.1	chr3	+	2109	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	-27	1444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	211767.20851969084	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	88	729	25.0	-150	False	ATTAAA	-17
PB.9573.1	chr5	+	4607	2	incomplete-splice_match	GM2A	ENST00000523466.5	553	4	-26	49651	-26	-49651	3prime_fragment	FALSE	canonical	1	32658	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	112	339	2562	2900	20.0	-10	True	TATAAA	-13
PB.7933.2	chr3	+	1998	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	-19	1444	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	211767.20851969084	NA	2	1	TRUE	NA	NA	NA	C	coding	213	642	80	721	25.0	-22	True	ATTAAA	-17
PB.6419.3	chr2	-	3723	20	novel_not_in_catalog	PRKD3	novel	6111	19	NA	NA	78	-2440	any annotated donor/acceptor	FALSE	canonical	1	11595	junction_19	91689.94556517717	NA	11	NA	TRUE	NA	NA	NA	B	coding	890	2673	819	3491	30.0	41	True	TATAAA	-14
PB.8843.1	chr4	+	1450	13	full-splice_match	ANXA3	ENST00000264908.10	1657	13	229	-22	1	-8	multi-exon	FALSE	canonical	1	473124	junction_1	90973.90390423173	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	151	1122	30.0	-22	True	AATAAA	-17
PB.3712.40	chr14	-	1969	7	novel_not_in_catalog	IGHM	novel	1686	6	NA	NA	-479394	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	6437391.351820068	NA	4	1	TRUE	NA	NA	NA	B	coding	375	1128	723	1850	35.0	NA	False	AATAAA	-12
PB.7933.9	chr3	+	2093	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	3	1444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	211767.20851969084	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	58	699	25.0	0	True	ATTAAA	-17
PB.7933.8	chr3	+	2794	3	full-splice_match	VHL	ENST00000256474.2	3737	3	783	160	3	-22	multi-exon	FALSE	canonical	1	320302	junction_1	96601.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	213	642	58	699	100.0	0	True	NA	NA
PB.6419.5	chr2	-	2830	18	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	-37	-2437	no_combination_of_known_junctions	FALSE	canonical	1	4163	junction_17	80343.64053890627	NA	0	NA	TRUE	NA	NA	NA	B	coding	786	2361	235	2595	25.0	-4	True	TATAAA	-17
PB.6419.4	chr2	-	3917	20	novel_not_in_catalog	PRKD3	novel	6111	19	NA	NA	-68	-2437	any annotated donor/acceptor	FALSE	canonical	1	2704	junction_19	92958.69535435285	NA	0	NA	TRUE	NA	NA	NA	B	coding	890	2673	1010	3682	25.0	394	False	TATAAA	-17
PB.1592.4	chr10	+	3042	3	incomplete-splice_match	CUTC	ENST00000471520.5	831	8	-21	13179	-21	-794	3prime_fragment	FALSE	canonical	1	282071	junction_1	30115.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	93	282	90	371	70.0	1	True	NA	NA
PB.6376.1	chr2	-	1894	12	novel_in_catalog	EIF2B4	novel	1754	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	161641	junction_9	142315.1891608352	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	25	1008	10.0	-1	True	AATAAA	-23
PB.5532.1	chr18	+	1411	9	incomplete-splice_match	ZNF236	ENST00000320610.13	7124	31	-40	88453	-40	-17	3prime_fragment	FALSE	canonical	1	18760	junction_1	19740.0601363699	NA	0	NA	TRUE	NA	NA	NA	B	coding	456	1368	42	1409	80.0	-16	True	AAAAAG	-26
PB.1592.1	chr10	+	2321	7	incomplete-splice_match	CUTC	ENST00000471520.5	831	8	-75	-425	-14	-1	intron_retention	FALSE	canonical	1	79852	junction_6	144334.78112062556	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	144	728	20.0	-53	False	AATAAA	-16
PB.1592.2	chr10	+	1336	9	full-splice_match	CUTC	ENST00000370476.9	1346	9	9	1	9	-1	multi-exon	FALSE	canonical	1	272250	junction_7	81543.0939243171	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	121	942	20.0	-30	True	AATAAA	-16
PB.1592.3	chr10	+	1301	8	full-splice_match	CUTC	ENST00000471520.5	831	8	-46	-424	15	-2	multi-exon	FALSE	canonical	1	79852	junction_6	133957.9686316509	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	115	699	20.0	-24	True	AATAAA	-15
PB.2257.7	chr11	+	2687	7	novel_not_in_catalog	AASDHPPT	novel	568	4	NA	NA	5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	223885.04693660443	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	49	885	15.0	1	True	AATAAA	-37
PB.2257.6	chr11	+	1108	6	full-splice_match	AASDHPPT	ENST00000278618.8	2955	6	174	1673	5	-261	multi-exon	FALSE	canonical	1	420291	junction_2	88663.02605122386	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	49	978	65.0	1	True	TTTAAA	-21
PB.2257.5	chr11	+	2271	6	full-splice_match	AASDHPPT	ENST00000278618.8	2955	6	162	522	-7	-511	multi-exon	FALSE	canonical	1	420291	junction_2	88663.02605122386	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	61	990	30.0	-11	True	NA	NA
PB.2257.4	chr11	+	4724	2	incomplete-splice_match	AASDHPPT	ENST00000525660.1	1252	5	-17	13361	-17	-7522	3prime_fragment	FALSE	canonical	1	505806	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	71	499	70.0	-21	True	AATATA	-4
PB.2257.3	chr11	+	2681	5	full-splice_match	AASDHPPT	ENST00000525660.1	1252	5	-18	-1411	-18	-1	multi-exon	FALSE	canonical	1	8869	junction_2	249563.57237923867	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	72	488	15.0	-22	True	AATAAA	-37
PB.2257.2	chr11	+	2658	6	full-splice_match	AASDHPPT	ENST00000278618.8	2955	6	180	117	11	-106	multi-exon	FALSE	canonical	1	420291	junction_2	88663.02605122386	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	43	972	40.0	7	True	AATAAA	-16
PB.2257.1	chr11	+	2764	6	full-splice_match	AASDHPPT	ENST00000278618.8	2955	6	180	11	11	0	multi-exon	FALSE	canonical	1	420291	junction_2	88663.02605122386	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	43	972	20.0	7	True	AATAAA	-27
PB.6376.2	chr2	-	1766	13	full-splice_match	EIF2B4	ENST00000347454.8	1792	13	22	4	-7	2	multi-exon	FALSE	canonical	1	294637	junction_10	114512.51870025559	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	151	1722	10.0	-21	False	AATAAA	-21
PB.9166.28	chr5	-	1911	10	incomplete-splice_match	ZFR	ENST00000265069.12	4738	20	22	42872	-1	9505	3prime_fragment	FALSE	canonical	1	314024	junction_8	127768.78529168843	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1830	82	1911	45.0	0	True	NA	NA
PB.10338.89	chr6	-	4212	23	full-splice_match	THBS2	ENST00000366787.7	5811	23	-40	1639	-40	35	multi-exon	FALSE	canonical	1	28255	junction_22	118378.6012569923	NA	0	NA	TRUE	NA	NA	NA	C	coding	1172	3519	291	3809	45.0	-239	False	GATAAA	-10
PB.8827.43	chr4	-	2008	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-12	613	-12	-613	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	231	1580	70.0	-3	True	NA	NA
PB.8827.42	chr4	-	2375	12	full-splice_match	G3BP2	ENST00000359707.8	4883	12	557	1951	-11	-344	multi-exon	FALSE	canonical	1	173938	junction_4	492708.8761422128	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	230	1678	30.0	-2	True	AATAAA	-13
PB.8827.41	chr4	-	2285	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-14	338	-14	-338	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	233	1582	25.0	-5	True	AATAAA	-19
PB.8827.40	chr4	-	2515	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-11	105	-11	-105	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	230	1579	35.0	-2	True	AATACA	-27
PB.8827.44	chr4	-	1908	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-13	714	-13	-714	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	232	1581	20.0	-4	True	AGTAAA	-20
PB.4537.9	chr16	-	6437	23	full-splice_match	AP1G1	ENST00000299980.8	6969	23	360	172	-7	-172	multi-exon	FALSE	canonical	1	200130	junction_17	93919.1803663445	NA	1	NA	TRUE	NA	NA	NA	C	coding	822	2469	83	2551	70.0	-8	True	AATGAA	-33
PB.5515.1	chr18	+	1704	3	novel_in_catalog	CDH7	novel	2728	12	NA	NA	-56	48	combination_of_known_junctions	FALSE	canonical	1	7084	junction_2	509.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	158	477	498	974	85.0	-959	False	AGTAAA	-10
PB.10507.4	chr7	-	3180	1	novel_in_catalog	AC010132.3	novel	2430	9	NA	NA	0	-18256	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	134	405	17	421	80.0	-1	True	NA	NA
PB.6411.1	chr2	-	2673	12	incomplete-splice_match	STRN	ENST00000263918.8	8168	18	72439	4691	8895	1075	5prime_fragment	FALSE	canonical	1	126852	junction_10	30865.02635750676	NA	0	NA	TRUE	NA	NA	NA	B	coding	463	1392	157	1548	30.0	8916	False	AATAAA	-19
PB.10507.3	chr7	-	4903	7	novel_in_catalog	AC010132.3	novel	2430	9	NA	NA	0	-6675	intron_retention	FALSE	canonical	1	1444276	junction_5	314331.14555429	NA	2	NA	TRUE	NA	NA	NA	B	coding	177	534	17	550	20.0	-1	True	AATAAA	-11
PB.4537.2	chr16	-	6604	23	full-splice_match	AP1G1	ENST00000299980.8	6969	23	360	5	-7	-5	multi-exon	FALSE	canonical	1	200130	junction_17	93919.1803663445	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	83	2551	20.0	-8	True	AATAAA	-20
PB.4537.4	chr16	-	6818	23	novel_in_catalog	AP1G1	novel	6969	23	NA	NA	13	-8	combination_of_known_junctions	FALSE	canonical	1	16072	junction_22	119941.96426791702	NA	14	NA	TRUE	NA	NA	NA	C	coding	822	2469	300	2768	25.0	349	False	AATAAA	-17
PB.4537.7	chr16	-	6944	24	novel_in_catalog	AP1G1	novel	6969	23	NA	NA	19	-12	combination_of_known_junctions	FALSE	canonical	1	11843	junction_23	137492.7018092288	NA	2	NA	TRUE	NA	NA	NA	C	coding	822	2469	430	2898	35.0	-15	True	AATAAA	-13
PB.11525.4	chr9	-	2308	6	novel_in_catalog	ARHGEF39	novel	4498	12	NA	NA	-32	82	intron_retention	FALSE	canonical	1	67143	junction_5	24117.685713185667	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	56	703	25.0	-33	True	AGTAAA	-22
PB.9482.2	chr5	-	1574	10	full-splice_match	SIL1	ENST00000394817.6	1923	10	85	264	3	11	multi-exon	FALSE	canonical	1	247315	junction_9	99223.63792495077	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	56	1441	0.0	-8	True	ATTAAA	-23
PB.11525.6	chr9	-	1824	8	novel_in_catalog	ARHGEF39	novel	4498	12	NA	NA	0	78	intron_retention	FALSE	canonical	1	67143	junction_7	21745.921409753686	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	24	671	20.0	-1	True	AGTAAA	-18
PB.11625.32	chr9	-	2625	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-28	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	174	1562	85.0	-11	True	NA	NA
PB.765.3	chr1	-	1748	14	full-splice_match	ILF2	ENST00000361891.8	1659	14	46	-135	-20	-113	multi-exon	FALSE	canonical	1	1632815	junction_11	1054185.8382748698	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	81	1253	25.0	-16	False	TATAAA	-14
PB.10507.1	chr7	-	1430	8	full-splice_match	PSMA2	ENST00000223321.8	1487	8	49	8	-2	-8	multi-exon	FALSE	canonical	1	1444276	junction_6	303603.5816723606	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	17	721	35.0	-1	True	AATAAA	-20
PB.11525.2	chr9	-	3221	10	novel_in_catalog	ARHGEF39	novel	4498	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	37450	junction_1	27070.017837607626	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	24	1031	25.0	-1	True	NA	NA
PB.11525.3	chr9	-	3802	9	novel_not_in_catalog	ARHGEF39	novel	4498	12	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	46804.30446817899	NA	20	1	TRUE	NA	NA	NA	C	coding	207	624	17	640	20.0	6	True	NA	NA
PB.12219.22	chrX	-	3108	15	novel_in_catalog	ACSL4	novel	390	2	NA	NA	-3	987	no_combination_of_known_junctions	FALSE	canonical	1	10708	junction_14	187005.73687867363	NA	2	1	TRUE	NA	NA	NA	C	coding	670	2013	106	2118	10.0	-1	True	ATTAAA	-16
PB.12219.23	chrX	-	2470	16	novel_in_catalog	ACSL4	novel	390	2	NA	NA	26	340	no_combination_of_known_junctions	FALSE	canonical	1	206809	junction_14	167811.28496413925	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	115	2127	30.0	16	True	AATAAA	-26
PB.12219.20	chrX	-	3190	16	novel_in_catalog	ACSL4	novel	390	2	NA	NA	21	993	no_combination_of_known_junctions	FALSE	canonical	1	206809	junction_14	167811.28496413925	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	182	2194	5.0	-21	True	ATTAAA	-22
PB.12219.21	chrX	-	3400	17	novel_not_in_catalog	ACSL4	novel	390	2	NA	NA	4	987	any annotated donor/acceptor	FALSE	canonical	1	18	junction_14	235905.36102779084	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	398	2410	10.0	-1	True	ATTAAA	-16
PB.9563.4	chr5	+	2486	7	novel_in_catalog	NDST1	novel	777	2	NA	NA	-3	-11127	combination_of_known_junctions	FALSE	canonical	1	20718	junction_1	161484.63910307383	NA	0	NA	TRUE	NA	NA	NA	B	coding	556	1671	505	2175	10.0	-6	True	AATAAA	-24
PB.12219.24	chrX	-	1569	12	novel_in_catalog	ACSL4	novel	5225	16	NA	NA	6	17996	no_combination_of_known_junctions	FALSE	canonical	1	33358	junction_11	199753.62088572682	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1470	100	1569	65.0	8	True	NA	NA
PB.12219.25	chrX	-	1683	13	novel_in_catalog	ACSL4	novel	5225	16	NA	NA	-11	17996	no_combination_of_known_junctions	FALSE	canonical	1	206809	junction_11	180769.20508995486	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1470	214	1683	65.0	586	False	NA	NA
PB.5985.1	chr19	-	3317	5	novel_in_catalog	LRFN1	novel	3381	2	NA	NA	-5518	-251	no_combination_of_known_junctions	TRUE	canonical	1	13078	junction_4	16790.07115083197	NA	0	NA	TRUE	NA	NA	NA	A	coding	771	2316	188	2503	10.0	7	True	ATTAAA	-17
PB.9482.3	chr5	-	1730	11	novel_in_catalog	SIL1	novel	1923	10	NA	NA	32	5	combination_of_known_junctions	FALSE	canonical	1	1921	junction_10	209637.62669828619	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	197	1603	5.0	1	True	ATTAAA	-17
PB.12330.3	chrX	-	1273	8	full-splice_match	BCAP31	ENST00000345046.11	1643	8	363	7	0	-2	multi-exon	FALSE	canonical	1	1555889	junction_7	738190.1571333025	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	95	835	10.0	-2	True	AATAAA	-16
PB.6379.1	chr2	+	3274	8	novel_in_catalog	NRBP1	novel	2887	19	NA	NA	-12	1696	intron_retention	TRUE	canonical	1	579488	junction_1	287796.1186582882	NA	0	NA	TRUE	NA	NA	NA	B	coding	189	570	130	699	75.0	-3	True	NA	NA
PB.3712.45	chr14	-	1474	2	full-splice_match	IGHV3-30	ENST00000603660.1	431	2	1	-1044	1	1044	multi-exon	FALSE	canonical	1	55437	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	173	522	80	601	20.0	NA	False	ATTAAA	-24
PB.2489.18	chr12	-	2715	21	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-5031	-1	any annotated donor/acceptor	FALSE	canonical	1	953	junction_20	84246.62088802138	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	134	2602	65.0	-1	True	NA	NA
PB.7158.3	chr20	+	1996	2	full-splice_match	PRNP	ENST00000379440.8	2657	2	195	466	-28	-466	multi-exon	FALSE	canonical	1	559317	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	93	854	50.0	-261	False	NA	NA
PB.2489.16	chr12	-	2647	21	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-4529	0	any annotated donor/acceptor	FALSE	canonical	1	3654	junction_20	83765.12005750067	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	32	2533	65.0	-1	True	NA	NA
PB.2489.14	chr12	-	2892	22	full-splice_match	EPS8	ENST00000645775.1	3904	22	0	1012	0	0	multi-exon	FALSE	canonical	1	9714	junction_21	101248.73581126178	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	250	2778	65.0	-1	True	NA	NA
PB.2489.15	chr12	-	2707	22	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-4529	0	any annotated donor/acceptor	FALSE	canonical	1	965	junction_21	102406.45610952252	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	65	2593	65.0	-1	True	NA	NA
PB.2489.12	chr12	-	3231	21	full-splice_match	EPS8	ENST00000644374.1	3873	21	0	642	0	179	multi-exon	FALSE	canonical	1	176036	junction_20	57333.91663952063	NA	2	NA	TRUE	NA	NA	NA	C	coding	822	2469	250	2718	70.0	-1	True	TTTAAA	-21
PB.2489.13	chr12	-	2830	21	full-splice_match	EPS8	ENST00000644374.1	3873	21	2	1041	2	0	multi-exon	FALSE	canonical	1	176036	junction_20	57333.91663952063	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	248	2716	65.0	1	True	NA	NA
PB.2489.10	chr12	-	3993	22	novel_not_in_catalog	EPS8	novel	3722	20	NA	NA	-4503	-18	any annotated donor/acceptor	FALSE	canonical	1	685	junction_21	102443.8509293214	NA	2	NA	TRUE	NA	NA	NA	C	coding	842	2529	400	2928	40.0	527	False	CATAAA	-10
PB.2489.11	chr12	-	3766	21	full-splice_match	EPS8	ENST00000644374.1	3873	21	-18	125	-6	-53	multi-exon	FALSE	canonical	1	176036	junction_20	57333.91663952063	NA	3	NA	TRUE	NA	NA	NA	C	coding	822	2469	268	2736	40.0	347	False	ATTAAA	-39
PB.9955.19	chr6	+	4910	6	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-13	-2	no_combination_of_known_junctions	FALSE	canonical	1	5050	junction_1	161426.00851040083	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	120	944	5.0	-6	True	AATAAA	-14
PB.9955.18	chr6	+	5488	9	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	1	5629	junction_1	167985.87974695783	NA	3	NA	TRUE	NA	NA	NA	C	coding	419	1260	263	1522	5.0	-6	True	AATAAA	-14
PB.9955.17	chr6	+	4593	7	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-19	159	no_combination_of_known_junctions	FALSE	canonical	1	2015	junction_5	153785.537199988	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	171	1232	85.0	-12	True	NA	NA
PB.9955.16	chr6	+	4307	5	full-splice_match	KCTD20	ENST00000449081.6	4094	5	-54	-159	-33	159	multi-exon	FALSE	canonical	1	5679	junction_2	157905.10396912444	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	185	946	85.0	7	True	NA	NA
PB.9955.15	chr6	+	2289	1	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-34	1538	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	6	True	NA	NA
PB.9955.14	chr6	+	4412	6	full-splice_match	KCTD20	ENST00000481911.5	1494	6	-49	-2869	-35	159	multi-exon	FALSE	canonical	1	8734	junction_3	160431.83603063328	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	530	1051	85.0	5	True	NA	NA
PB.9955.13	chr6	+	4742	9	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-35	-4	combination_of_known_junctions	FALSE	canonical	1	5629	junction_1	167985.87974695783	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	285	1544	65.0	5	True	NA	NA
PB.9955.12	chr6	+	5345	8	full-splice_match	KCTD20	ENST00000373731.6	5619	8	274	0	3	0	multi-exon	FALSE	canonical	1	212416	junction_1	71029.92897766003	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	118	1377	10.0	41	True	AATAAA	-16
PB.9955.11	chr6	+	3383	2	novel_not_in_catalog	KCTD20	novel	5619	8	NA	NA	-36	3906	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	4	True	NA	NA
PB.12330.2	chrX	-	1817	8	full-splice_match	BCAP31	ENST00000458587.7	1824	8	1	6	1	-1	multi-exon	FALSE	canonical	1	129178	junction_7	1163271.7957742976	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	437	1378	10.0	-12	True	AATAAA	-17
PB.6808.1	chr2	-	3210	1	antisense	novelGene_PSMD14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.5501.4	chr18	-	4852	13	novel_not_in_catalog	LMAN1	novel	5521	13	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	286607.11729341804	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	27	1031	20.0	-17	True	AATAAA	-14
PB.3032.5	chr12	+	6828	5	full-splice_match	ZNF84	ENST00000539354.5	3237	5	101	-3692	12	0	multi-exon	FALSE	canonical	1	29702	junction_1	70663.37918389907	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	246	2462	15.0	-34	True	NA	NA
PB.5501.1	chr18	-	4824	13	full-splice_match	LMAN1	ENST00000251047.5	5521	13	693	4	-4	-4	multi-exon	TRUE	canonical	1	787348	junction_9	104890.67691526761	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	26	1558	20.0	-16	True	AATAAA	-13
PB.11539.3	chr9	-	8971	10	novel_not_in_catalog	PAX5	novel	8615	10	NA	NA	6333	-610	any annotated donor/acceptor	FALSE	canonical	1	25265	junction_9	30963.312426877786	NA	2	NA	TRUE	NA	NA	NA	B	coding	390	1173	1124	2296	90.0	-5	True	NA	NA
PB.12003.1	chrX	+	3038	1	genic	SAT1	novel	NA	NA	NA	NA	-2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	156	471	1851	2321	25.0	-2	True	AATAAA	-15
PB.12003.2	chrX	+	2671	3	novel_in_catalog	SAT1	novel	801	2	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5389152	junction_2	2004.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	1609	2079	25.0	0	True	AATAAA	-15
PB.12003.3	chrX	+	1157	7	full-splice_match	SAT1	ENST00000489394.5	1135	7	-24	2	0	-2	multi-exon	FALSE	canonical	1	297163	junction_3	2285258.019157094	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-15
PB.12003.4	chrX	+	1047	6	full-splice_match	SAT1	ENST00000379270.4	1065	6	0	18	0	-2	multi-exon	FALSE	canonical	1	3203851	junction_3	823224.4426790546	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	180	695	25.0	0	True	AATAAA	-15
PB.12003.5	chrX	+	2796	2	full-splice_match	SAT1	ENST00000379251.7	801	2	0	-1995	0	-2	multi-exon	FALSE	canonical	1	5393160	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	1609	2079	25.0	0	True	AATAAA	-15
PB.12003.6	chrX	+	2581	4	novel_in_catalog	SAT1	novel	801	2	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5013071	junction_2	178238.48896788695	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	1609	2229	25.0	0	True	AATAAA	-15
PB.12003.7	chrX	+	2309	5	novel_in_catalog	SAT1	novel	801	2	NA	NA	18	-2	intron_retention	FALSE	canonical	1	5013071	junction_3	167533.16100476944	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	1337	1957	25.0	-1665	False	AATAAA	-15
PB.12003.8	chrX	+	2581	4	novel_in_catalog	SAT1	novel	801	2	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5114739	junction_2	130314.49645377141	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	1519	1989	25.0	0	True	AATAAA	-15
PB.3997.6	chr15	-	1980	1	incomplete-splice_match	CSPG4	ENST00000308508.5	8290	10	36247	300	36247	-300	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	122	369	684	1052	5.0	-9778	False	GATAAA	-23
PB.3997.5	chr15	-	8009	10	full-splice_match	CSPG4	ENST00000308508.5	8290	10	-15	296	-15	-296	multi-exon	FALSE	canonical	1	60986	junction_9	29500.407028370068	NA	1	NA	TRUE	NA	NA	NA	C	coding	2322	6969	109	7077	10.0	-16	False	GATAAA	-27
PB.3032.6	chr12	+	3251	6	novel_not_in_catalog	ZNF84	novel	7020	5	NA	NA	5	-6	any annotated donor/acceptor	FALSE	canonical	1	2537	junction_1	88627.78046053054	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	367	2583	30.0	-17	True	AATAAA	-19
PB.2588.1	chr12	-	1666	4	full-splice_match	TUBA1A	ENST00000301071.11	1915	4	245	4	-1	-4	multi-exon	FALSE	canonical	1	2618574	junction_1	930886.6466890585	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	101	1456	20.0	0	True	AATAAA	-17
PB.3997.1	chr15	-	8291	10	full-splice_match	CSPG4	ENST00000308508.5	8290	10	0	-1	0	1	multi-exon	FALSE	canonical	1	60986	junction_9	29500.407028370068	NA	1	NA	TRUE	NA	NA	NA	C	coding	2322	6969	94	7062	20.0	-1	True	AATAAA	-18
PB.2588.3	chr12	-	1687	4	full-splice_match	TUBA1A	ENST00000295766.9	1887	4	356	-156	356	-7	multi-exon	FALSE	canonical	1	42585	junction_3	1814677.2703965849	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	125	1480	30.0	655	False	AATAAA	-14
PB.3712.47	chr14	-	3955	3	novel_not_in_catalog	IGHV4-31	novel	428	2	NA	NA	35	4149	any annotated donor/acceptor	FALSE	canonical	1	4877	junction_1	34370.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	133	402	38	439	50.0	NA	False	ATTAAA	-20
PB.8605.8	chr3	-	1749	13	incomplete-splice_match	LSG1	ENST00000265245.9	3572	14	286	3862	-29	16	3prime_fragment	FALSE	canonical	1	237450	junction_12	65254.487042984685	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1719	30	1748	50.0	-1	True	AATGAA	-9
PB.8605.9	chr3	-	5163	9	novel_not_in_catalog	LSG1	novel	3572	14	NA	NA	-19	2618	intron_retention	FALSE	canonical	1	216	junction_1	132542.56924286627	NA	15	2	TRUE	NA	NA	NA	C	coding	393	1182	20	1201	100.0	9	True	TTTAAA	-29
PB.8605.4	chr3	-	2442	14	full-splice_match	LSG1	ENST00000265245.9	3572	14	286	844	-29	481	multi-exon	FALSE	canonical	1	237450	junction_13	63431.02711117564	NA	4	1	TRUE	NA	NA	NA	C	coding	658	1977	30	2006	60.0	-1	True	NA	NA
PB.8925.1	chr4	+	2037	4	intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	196	junction_2	169.63948701748527	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.8605.6	chr3	-	2226	14	novel_not_in_catalog	LSG1	novel	3572	14	NA	NA	-28	317	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	110401.07733545176	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	29	1954	70.0	0	True	NA	NA
PB.8605.7	chr3	-	1991	14	full-splice_match	LSG1	ENST00000265245.9	3572	14	252	1329	-63	-4	multi-exon	FALSE	canonical	1	237450	junction_13	63431.02711117564	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1926	64	1989	75.0	-35	True	AAAACA	-10
PB.8605.1	chr3	-	3155	13	novel_in_catalog	LSG1	novel	3572	14	NA	NA	-26	-1	no_combination_of_known_junctions	FALSE	canonical	1	1301	junction_12	111943.51260630912	NA	8	1	TRUE	NA	NA	NA	C	coding	458	1377	500	1876	10.0	2	True	NA	NA
PB.8605.2	chr3	-	3279	14	full-splice_match	LSG1	ENST00000265245.9	3572	14	286	7	-29	-7	multi-exon	FALSE	canonical	1	237450	junction_13	63431.02711117564	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	30	2006	25.0	-1	True	NA	NA
PB.8605.3	chr3	-	2954	14	full-splice_match	LSG1	ENST00000265245.9	3572	14	267	351	-48	-351	multi-exon	FALSE	canonical	1	237450	junction_13	63431.02711117564	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	49	2025	15.0	-20	True	NA	NA
PB.9730.2	chr6	+	3565	5	novel_in_catalog	GCNT2	novel	1255	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	3956	junction_1	36189.01032772242	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8286	False	AATAAA	-18
PB.9730.3	chr6	+	3598	3	full-splice_match	GCNT2	ENST00000379597.7	4525	3	-20	947	-20	-947	multi-exon	FALSE	canonical	1	71019	junction_1	11528.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	580	1785	40.0	-3	True	AGTAAA	-20
PB.11842.2	chr9	+	1717	3	full-splice_match	LINC00963	ENST00000444184.5	1887	3	328	-158	-39	158	multi-exon	FALSE	canonical	1	35665	junction_1	91927.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-8042	False	NA	NA
PB.3712.46	chr14	-	2501	4	novel_not_in_catalog	IGHV3-30	novel	431	2	NA	NA	-14139	1041	any annotated donor/acceptor	FALSE	canonical	1	1078	junction_1	33335.87743957952	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	33	434	20.0	NA	False	ATTAAA	-21
PB.10937.8	chr7	+	2024	15	novel_in_catalog	NUB1	novel	3180	15	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	21215	junction_1	196488.9337438002	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	158	1963	10.0	-1	True	TATAAA	-24
PB.9730.1	chr6	+	4558	5	full-splice_match	GCNT2	ENST00000495262.6	4573	5	14	1	-12	0	multi-exon	FALSE	canonical	1	11056	junction_1	34196.1607238298	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	593	1798	20.0	2	True	AATAAA	-18
PB.10665.1	chr7	+	4530	20	incomplete-splice_match	AKAP9	ENST00000356239.7	12471	50	138969	6	-3740	-1	5prime_fragment	FALSE	canonical	1	206730	junction_1	81380.53003447766	NA	0	NA	TRUE	NA	NA	NA	B	coding	1290	3873	150	4022	30.0	167	False	AATAAA	-19
PB.9730.4	chr6	+	3139	3	incomplete-splice_match	GCNT2	ENST00000397423.7	1108	5	7415	-2420	391	0	5prime_fragment	FALSE	canonical	1	9597	junction_1	42239.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1011	False	AATAAA	-18
PB.8853.78	chr4	-	2684	20	incomplete-splice_match	SEC31A	ENST00000513858.5	3687	24	-58	10351	3	-1456	3prime_fragment	FALSE	canonical	1	277702	junction_1	254285.99233503142	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2556	129	2684	60.0	9357	False	NA	NA
PB.730.12	chr1	-	1365	8	full-splice_match	CTSS	ENST00000368985.7	4107	8	149	2593	-16	49	multi-exon	FALSE	canonical	1	1078338	junction_4	276202.59509324835	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	113	1108	65.0	-17	True	NA	NA
PB.730.10	chr1	-	1711	8	full-splice_match	CTSS	ENST00000368985.7	4107	8	210	2186	45	185	multi-exon	FALSE	canonical	1	1078338	junction_4	276202.59509324835	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	52	1047	30.0	24	True	AATAAA	-19
PB.9730.5	chr6	+	3893	3	full-splice_match	GCNT2	ENST00000379597.7	4525	3	632	0	632	0	multi-exon	FALSE	canonical	1	71019	junction_1	11528.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	156	1133	20.0	-770	False	AATAAA	-18
PB.1065.1	chr1	-	3186	5	full-splice_match	ELK4	ENST00000357992.8	10239	5	114	6939	45	4386	multi-exon	FALSE	canonical	1	96355	junction_4	48012.618521072145	NA	3	1	TRUE	NA	NA	NA	C	coding	431	1296	227	1522	25.0	-14	True	ATTAAA	-18
PB.10937.9	chr7	+	3151	16	novel_in_catalog	NUB1	novel	3180	15	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	1	10111	junction_5	232633.8943687747	NA	1	1	TRUE	NA	NA	NA	C	coding	448	1347	586	1932	40.0	12	True	AATAAA	-18
PB.7903.3	chr3	-	2194	11	full-splice_match	CRBN	ENST00000231948.8	2206	11	9	3	0	-3	multi-exon	FALSE	canonical	1	252690	junction_5	82692.23860925522	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	15	1343	35.0	-11	True	AGTAAA	-17
PB.10142.14	chr6	-	1892	17	incomplete-splice_match	SEC63	ENST00000369002.8	6411	21	95	15258	17	-2054	3prime_fragment	FALSE	canonical	1	92394	junction_2	206161.2614417034	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1806	86	1891	70.0	-1	True	NA	NA
PB.12013.1	chrX	-	2056	2	incomplete-splice_match	AC107419.1	ENST00000608735.1	1081	5	-15	46826	-7	-46826	3prime_fragment	FALSE	canonical	1	8767	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	-15	True	ATTAAA	-24
PB.10449.12	chr7	-	3611	10	incomplete-splice_match	HNRNPA2B1	ENST00000608362.2	3497	11	528	17070	11	-2	3prime_fragment	FALSE	canonical	1	6843184	junction_9	3088624.0211955947	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	197	1222	30.0	1	True	AATAAA	-16
PB.10449.10	chr7	-	1884	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	661144	junction_2	5181242.849660966	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	25.0	-1	True	AATAAA	-21
PB.10449.11	chr7	-	3621	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1623379	junction_10	5002701.188289551	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	170	1231	25.0	-1	True	AATAAA	-17
PB.4805.2	chr17	-	3131	7	novel_in_catalog	ATPAF2	novel	1298	7	NA	NA	-9	-3	intron_retention	FALSE	canonical	1	172447	junction_6	26855.830252583062	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	2517	2849	20.0	-10	True	ATTAAA	-15
PB.10449.17	chr7	-	1550	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-1	-3	no_combination_of_known_junctions	FALSE	canonical	1	268032	junction_1	4632153.950811027	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	171	1196	30.0	-2	True	AATAAA	-15
PB.10449.14	chr7	-	2902	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	1172921	junction_1	4249563.637366856	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	176	1201	30.0	-7	True	AATAAA	-16
PB.4805.1	chr17	-	1317	8	full-splice_match	ATPAF2	ENST00000474627.7	1564	8	-8	255	-8	-1	multi-exon	FALSE	canonical	1	172447	junction_7	25958.44889394572	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	164	1033	20.0	-9	True	ATTAAA	-17
PB.10449.19	chr7	-	3456	11	full-splice_match	HNRNPA2B1	ENST00000356674.7	1711	11	-29	-1716	9	-3	multi-exon	FALSE	canonical	1	6843184	junction_10	2936723.3636205094	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	199	1224	30.0	-1	True	AATAAA	-15
PB.9145.1	chr5	-	2172	6	full-splice_match	CMBL	ENST00000296658.3	2335	6	162	1	-5	-1	multi-exon	FALSE	canonical	1	282566	junction_5	65371.91610347673	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	260	997	30.0	37	True	AATAAA	-19
PB.8853.71	chr4	-	3089	24	incomplete-splice_match	SEC31A	ENST00000311785.11	3909	26	54	5995	0	-59	3prime_fragment	FALSE	canonical	1	277702	junction_3	291510.6489341211	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2967	123	3089	70.0	9363	False	NA	NA
PB.11849.4	chr9	+	3088	26	full-splice_match	USP20	ENST00000372429.7	4315	26	5	1222	5	98	multi-exon	FALSE	canonical	1	93010	junction_1	54978.569842235804	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	178	2922	30.0	-7	True	AATATA	-21
PB.5997.1	chr19	+	1432	11	full-splice_match	PSMC4	ENST00000157812.6	1591	11	162	-3	-3	3	multi-exon	TRUE	canonical	1	982907	junction_6	354982.24540948524	NA	0	NA	TRUE	NA	NA	NA	A	coding	418	1257	37	1293	30.0	2	True	AATAAA	-22
PB.8853.70	chr4	-	3269	23	incomplete-splice_match	SEC31A	ENST00000505984.5	3596	25	-57	5613	0	-59	3prime_fragment	FALSE	canonical	1	173262	junction_3	296493.12138011074	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3147	123	3269	70.0	9363	False	NA	NA
PB.1175.1	chr1	-	4002	4	full-splice_match	WNT9A	ENST00000272164.5	3971	4	-33	2	-33	-2	multi-exon	FALSE	canonical	1	12631	junction_3	9250.711360034247	NA	2	NA	TRUE	NA	NA	NA	A	coding	365	1098	45	1142	15.0	0	True	AATAAA	-15
PB.7099.3	chr2	+	3615	9	full-splice_match	GPC1	ENST00000264039.6	3713	9	94	4	94	-4	multi-exon	FALSE	canonical	1	539317	junction_1	145309.00729974554	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	155	1831	20.0	0	True	AATAAA	-13
PB.4620.5	chr16	-	1847	6	novel_not_in_catalog	CHMP1A	novel	2483	7	NA	NA	9	-448	any annotated donor/acceptor	FALSE	canonical	1	23	junction_5	341297.6196280308	NA	4	1	TRUE	NA	NA	NA	C	coding	132	399	294	692	5.0	7	True	NA	NA
PB.4620.4	chr16	-	2323	6	full-splice_match	CHMP1A	ENST00000535997.6	2295	6	-3	-25	-3	-3	multi-exon	FALSE	canonical	1	47524	junction_5	323016.0000536196	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	297	695	25.0	-17	True	AATAAA	-16
PB.4620.3	chr16	-	2343	6	novel_not_in_catalog	CHMP1A	novel	2483	7	NA	NA	5	-3	any annotated donor/acceptor	FALSE	canonical	1	23	junction_5	373515.49281474255	NA	3	1	TRUE	NA	NA	NA	C	coding	189	570	298	867	25.0	3	True	AATAAA	-16
PB.4620.2	chr16	-	2329	6	novel_not_in_catalog	CHMP1A	novel	2483	7	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	23	junction_5	341297.6196280308	NA	3	1	TRUE	NA	NA	NA	C	coding	132	399	303	701	25.0	-2	True	AATAAA	-16
PB.4620.1	chr16	-	2832	5	novel_not_in_catalog	CHMP1A	novel	2483	7	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	23	junction_4	333026.287223978	NA	3	1	TRUE	NA	NA	NA	C	coding	117	354	318	671	25.0	-17	True	AATAAA	-16
PB.10517.1	chr7	+	1845	13	full-splice_match	DBNL	ENST00000448521.5	1808	13	50	-87	4	23	multi-exon	FALSE	canonical	1	631571	junction_2	250021.7444019731	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	49	1341	15.0	-12	True	NA	NA
PB.4819.5	chr17	+	1748	11	novel_in_catalog	PRPSAP2	novel	700	7	NA	NA	1	-41	combination_of_known_junctions	FALSE	canonical	1	22543	junction_1	133167.46525409276	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	199	1272	65.0	1	True	NA	NA
PB.4819.4	chr17	+	2041	13	novel_in_catalog	PRPSAP2	novel	700	7	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	4035	junction_1	161319.7308594841	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	455	1528	30.0	-23	False	AATAAA	-24
PB.4819.7	chr17	+	1467	12	novel_in_catalog	PRPSAP2	novel	700	7	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	1564	junction_11	159214.70768199922	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	295	1323	20.0	1	True	NA	NA
PB.4819.6	chr17	+	1883	11	novel_in_catalog	PRPSAP2	novel	700	7	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	46608	junction_3	161049.82009182748	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	463	1314	35.0	2	True	AATAAA	-16
PB.4819.1	chr17	+	1755	11	novel_in_catalog	PRPSAP2	novel	700	7	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	20747	junction_1	133668.2925679834	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	169	1242	30.0	-26	True	AATAAA	-24
PB.4819.3	chr17	+	1926	12	full-splice_match	PRPSAP2	ENST00000268835.6	1910	12	51	-67	-5	-5	multi-exon	FALSE	canonical	1	54007	junction_1	119225.69738819932	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	269	1342	25.0	27	True	AATAAA	-31
PB.4819.2	chr17	+	1939	12	novel_in_catalog	PRPSAP2	novel	700	7	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	3311	junction_1	132491.55400874763	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	298	1371	30.0	-12	True	AATAAA	-15
PB.1143.2	chr1	+	4702	8	novel_in_catalog	AL392172.1	novel	543	3	NA	NA	3	168607	no_combination_of_known_junctions	FALSE	canonical	1	2267	junction_1	10658.082425070274	NA	0	NA	TRUE	NA	NA	NA	B	coding	1524	4575	109	4683	35.0	0	True	AATAAA	-30
PB.1143.1	chr1	+	4718	9	novel_in_catalog	AL392172.1	novel	543	3	NA	NA	-1	168608	no_combination_of_known_junctions	FALSE	canonical	1	2299	junction_1	12105.695673292592	NA	0	NA	TRUE	NA	NA	NA	B	coding	1524	4575	124	4698	30.0	10	True	AATAAA	-31
PB.10208.9	chr6	-	2544	1	novel_in_catalog	ARHGAP18	novel	4462	15	NA	NA	6	-129257	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	127	384	2	385	90.0	5	True	NA	NA
PB.10208.8	chr6	-	1491	11	incomplete-splice_match	ARHGAP18	ENST00000368149.2	4462	15	-4	24684	-4	-22397	3prime_fragment	FALSE	canonical	1	242593	junction_1	22895.683166046827	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1398	94	1491	80.0	-5	True	AATAGA	-2
PB.10208.7	chr6	-	1761	12	incomplete-splice_match	ARHGAP18	ENST00000368149.2	4462	15	6	23119	6	-20832	3prime_fragment	FALSE	canonical	1	242593	junction_2	22129.66133742428	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1677	84	1760	65.0	5	True	GATAAA	-44
PB.10208.6	chr6	-	2168	15	full-splice_match	ARHGAP18	ENST00000368149.2	4462	15	6	2288	6	-1	multi-exon	FALSE	canonical	1	240157	junction_3	23631.026925443177	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	84	2075	30.0	5	True	AATAAA	-22
PB.10208.5	chr6	-	2528	15	full-splice_match	ARHGAP18	ENST00000368149.2	4462	15	48	1886	48	401	multi-exon	FALSE	canonical	1	240157	junction_3	23631.026925443177	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	42	2033	30.0	-16	True	ATTAAA	-19
PB.10208.4	chr6	-	3111	15	full-splice_match	ARHGAP18	ENST00000368149.2	4462	15	0	1351	0	936	multi-exon	FALSE	canonical	1	240157	junction_3	23631.026925443177	NA	2	NA	TRUE	NA	NA	NA	C	coding	663	1992	90	2081	35.0	-1	True	ATTAAA	-10
PB.10208.3	chr6	-	3258	15	full-splice_match	ARHGAP18	ENST00000368149.2	4462	15	6	1198	6	1089	multi-exon	FALSE	canonical	1	240157	junction_3	23631.026925443177	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	84	2075	25.0	5	True	AATAAA	-26
PB.10208.2	chr6	-	3493	15	full-splice_match	ARHGAP18	ENST00000368149.2	4462	15	0	969	0	-969	multi-exon	FALSE	canonical	1	240157	junction_3	23631.026925443177	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	90	2081	30.0	-1	True	ATTAAA	-12
PB.10208.1	chr6	-	4462	15	full-splice_match	ARHGAP18	ENST00000368149.2	4462	15	-4	4	-4	-4	multi-exon	FALSE	canonical	1	240157	junction_3	23631.026925443177	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	94	2085	50.0	-5	True	AATAAA	-25
PB.9246.9	chr5	+	3756	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	285	-1502	-5	795	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	3	NA	TRUE	NA	NA	NA	C	coding	706	2121	27	2147	45.0	3	True	AATAAA	-12
PB.1630.17	chr10	-	3493	19	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	13	-134	any annotated donor/acceptor	FALSE	canonical	1	13611	junction_12	230197.02092320102	NA	2	2	TRUE	NA	NA	NA	C	coding	370	1113	861	1973	20.0	-14	True	AATAAA	-19
PB.1630.16	chr10	-	3327	19	novel_in_catalog	NT5C2	novel	3365	17	NA	NA	-1	-133	combination_of_known_junctions	FALSE	canonical	1	38249	junction_18	218367.476898751	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	97	1806	20.0	3952	False	AATAAA	-20
PB.534.8	chr1	+	3109	11	novel_in_catalog	CDC7	novel	3173	12	NA	NA	-41	-9	combination_of_known_junctions	FALSE	canonical	1	7154	junction_7	57243.96805157727	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	161	1789	25.0	-16	True	AATAAA	-13
PB.1630.14	chr10	-	3279	18	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	-9	-132	any annotated donor/acceptor	FALSE	canonical	1	8946	junction_1	212012.35644782722	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	249	1757	20.0	3944	False	AATAAA	-21
PB.786.4	chr1	-	2017	1	incomplete-splice_match	PYGO2	ENST00000368457.2	3146	3	2705	1	2705	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	116	351	258	608	25.0	9914	False	AATAAA	-17
PB.1630.12	chr10	-	3387	18	novel_in_catalog	NT5C2	novel	3365	17	NA	NA	0	-132	no_combination_of_known_junctions	FALSE	canonical	1	30047	junction_16	251976.87281335137	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	753	1865	20.0	-1	True	AATAAA	-21
PB.1630.11	chr10	-	3437	20	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	0	-132	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_19	225554.30392301074	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	206	1915	20.0	-1	True	AATAAA	-21
PB.1630.10	chr10	-	3432	19	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	7	-132	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_18	198585.99803487197	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	225	1910	20.0	-20	True	AATAAA	-21
PB.534.2	chr1	+	3067	11	novel_not_in_catalog	CDC7	novel	3173	12	NA	NA	-64	-3	any annotated donor/acceptor	FALSE	canonical	1	7154	junction_7	67611.02219231713	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	113	1741	25.0	-39	True	AATAAA	-19
PB.534.3	chr1	+	2486	12	full-splice_match	CDC7	ENST00000234626.10	3173	12	-52	739	-52	-739	multi-exon	FALSE	canonical	1	81588	junction_1	33331.668466246956	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	172	1896	15.0	-27	True	TTTAAA	-19
PB.7903.6	chr3	-	1386	11	full-splice_match	CRBN	ENST00000231948.8	2206	11	12	808	3	41	multi-exon	FALSE	canonical	1	252690	junction_5	82692.23860925522	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	12	1340	35.0	-8	True	GATAAA	-27
PB.2362.2	chr11	+	2890	7	novel_not_in_catalog	TIRAP	novel	545	3	NA	NA	8	-1267	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	34879.743282774056	NA	3	NA	TRUE	NA	NA	NA	B	coding	201	606	489	1094	15.0	0	True	NA	NA
PB.534.7	chr1	+	3213	12	full-splice_match	CDC7	ENST00000234626.10	3173	12	-42	2	-42	-2	multi-exon	FALSE	canonical	1	81588	junction_1	33331.668466246956	NA	21	1	TRUE	NA	NA	NA	C	coding	574	1725	162	1886	25.0	-17	True	AATAAA	-20
PB.1630.19	chr10	-	3466	20	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	0	-140	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_19	227948.70583497363	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	840	1952	25.0	-1	True	AATAAA	-13
PB.2362.1	chr11	+	2656	6	novel_not_in_catalog	TIRAP	novel	545	3	NA	NA	5	-1267	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	34747.77777988112	NA	1	NA	TRUE	NA	NA	NA	B	coding	201	606	353	958	15.0	-17	True	NA	NA
PB.10517.8	chr7	+	2394	12	novel_in_catalog	DBNL	novel	1808	13	NA	NA	-2	0	intron_retention	FALSE	canonical	1	631571	junction_2	260496.15914628553	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	35	661	25.0	2	True	NA	NA
PB.2847.18	chr12	+	3727	18	full-splice_match	HSP90B1	ENST00000299767.9	2858	18	75	-944	-1	943	multi-exon	FALSE	canonical	1	1962474	junction_4	1322603.7403297934	NA	1	NA	TRUE	NA	NA	NA	C	coding	803	2412	108	2519	55.0	-1	True	NA	NA
PB.2847.19	chr12	+	2537	4	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	-1	-2157	intron_retention	FALSE	canonical	0	0	junction_3	1608872.534145021	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.2847.14	chr12	+	2211	15	incomplete-splice_match	HSP90B1	ENST00000299767.9	2858	18	74	1233	-2	-707	3prime_fragment	FALSE	canonical	1	1962474	junction_4	892233.9011633031	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2103	109	2211	40.0	-2	True	NA	NA
PB.2847.15	chr12	+	1705	12	incomplete-splice_match	HSP90B1	ENST00000548462.5	3032	17	-30	5178	-2	-718	3prime_fragment	FALSE	canonical	1	1962474	junction_4	867805.2438171798	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1596	109	1704	65.0	-2	True	AATGAA	-3
PB.2847.16	chr12	+	1047	7	incomplete-splice_match	HSP90B1	ENST00000640977.1	1127	8	75	355	-1	-355	3prime_fragment	FALSE	canonical	1	1962474	junction_4	934401.9059122645	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	939	108	1046	75.0	-1	True	NA	NA
PB.2847.17	chr12	+	4205	18	full-splice_match	HSP90B1	ENST00000299767.9	2858	18	75	-1422	-1	1421	multi-exon	FALSE	canonical	1	1962474	junction_4	1322603.7403297934	NA	2	NA	TRUE	NA	NA	NA	C	coding	803	2412	108	2519	75.0	-1	True	NA	NA
PB.2847.10	chr12	+	3217	18	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	2	intron_retention	FALSE	canonical	1	23659	junction_3	1772172.6945686648	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	399	2132	70.0	-2	True	NA	NA
PB.2847.11	chr12	+	2868	17	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	2	intron_retention	FALSE	canonical	1	1962474	junction_4	1334832.4347127338	NA	5	NA	TRUE	NA	NA	NA	C	coding	378	1137	1465	2601	15.0	-2	True	AATAAA	-18
PB.2847.12	chr12	+	2749	18	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	62585	junction_17	1549078.448395416	NA	1	1	TRUE	NA	NA	NA	C	coding	796	2391	109	2499	15.0	-2	True	AATAAA	-21
PB.2847.13	chr12	+	2420	17	incomplete-splice_match	HSP90B1	ENST00000299767.9	2858	18	124	516	20	10	3prime_fragment	FALSE	canonical	1	1962474	junction_4	1323522.6343131126	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2361	59	2419	65.0	-7287	False	NA	NA
PB.8617.5	chr3	-	2659	10	novel_not_in_catalog	PCYT1A	novel	724	6	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	13392	junction_1	153345.7000219109	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	164	1267	15.0	-90	False	AATAAA	-20
PB.8617.4	chr3	-	5620	9	novel_in_catalog	PCYT1A	novel	724	6	NA	NA	-5	-1	combination_of_known_junctions	TRUE	canonical	1	58316	junction_8	147477.8576824649	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	198	1301	15.0	-41	True	AATAAA	-20
PB.1499.8	chr10	-	2410	15	incomplete-splice_match	ANXA11	ENST00000422982.7	2534	16	2	1850	2	-1334	3prime_fragment	FALSE	canonical	1	655555	junction_14	540147.3999457208	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	286	1914	35.0	6	True	AATACA	-18
PB.5436.8	chr18	+	4180	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	157	1494	-20	-1494	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	53	3409	60.0	22	True	NA	NA
PB.8617.3	chr3	-	5492	9	full-splice_match	PCYT1A	ENST00000431016.5	1482	9	171	-4181	0	-2	multi-exon	FALSE	canonical	1	259432	junction_7	101017.94275245116	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	71	1174	15.0	3	True	AATAAA	-19
PB.9297.7	chr5	+	4005	19	full-splice_match	HMGCR	ENST00000343975.9	3681	19	-18	-306	-18	306	multi-exon	FALSE	canonical	1	96707	junction_12	174780.20293817922	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	111	2618	20.0	-7	True	AATAAA	-23
PB.1499.2	chr10	-	2080	16	full-splice_match	ANXA11	ENST00000422982.7	2534	16	7	447	7	17	multi-exon	FALSE	canonical	1	655555	junction_15	524679.9486559231	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	281	1798	20.0	11	True	AATAGA	-43
PB.1499.3	chr10	-	2560	17	novel_in_catalog	ANXA11	novel	6720	15	NA	NA	-20	5	combination_of_known_junctions	FALSE	canonical	1	26383	junction_16	724374.1295033165	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	773	2290	10.0	-6	True	AATAGA	-31
PB.5436.1	chr18	+	5596	15	novel_not_in_catalog	DSG2	novel	5831	15	NA	NA	-272	-158	any annotated donor/acceptor	FALSE	canonical	1	530	junction_1	120789.12262750504	NA	31	NA	TRUE	NA	NA	NA	C	coding	940	2823	667	3489	20.0	-407	False	AATAAA	-17
PB.1499.1	chr10	-	2467	16	full-splice_match	ANXA11	ENST00000422982.7	2534	16	67	0	17	0	multi-exon	TRUE	canonical	1	655555	junction_15	524679.9486559231	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	221	1738	15.0	333	False	NA	NA
PB.1499.6	chr10	-	1898	17	novel_not_in_catalog	ANXA11	novel	6720	15	NA	NA	2	-10	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	659320.2682569392	NA	2	1	TRUE	NA	NA	NA	C	coding	373	1122	522	1643	25.0	6	True	AATAGA	-16
PB.1499.7	chr10	-	3784	15	novel_in_catalog	ANXA11	novel	6720	15	NA	NA	2	-12	intron_retention	FALSE	canonical	1	655555	junction_14	540147.3999457208	NA	2	NA	TRUE	NA	NA	NA	C	coding	542	1629	286	1914	25.0	6	True	AATAGA	-14
PB.1499.4	chr10	-	1990	15	full-splice_match	ANXA11	ENST00000372231.7	6720	15	29	4701	-21	-2	multi-exon	FALSE	canonical	1	313717	junction_14	556861.3552522683	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	210	1727	15.0	-7	True	AATAGA	-24
PB.1499.5	chr10	-	1837	16	novel_not_in_catalog	ANXA11	novel	6720	15	NA	NA	14	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	695707.209480655	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	358	1578	20.0	18	True	AATAGA	-20
PB.4910.1	chr17	-	4152	5	novel_in_catalog	AC060766.7	novel	1212	2	NA	NA	-23451	-2664	no_combination_of_known_junctions	FALSE	canonical	1	36768	junction_4	16182.82165600301	NA	0	NA	TRUE	NA	NA	NA	A	coding	578	1737	426	2162	25.0	36	False	NA	NA
PB.4656.1	chr17	+	2951	18	novel_not_in_catalog	RPA1	novel	577	6	NA	NA	-24	533	any annotated donor/acceptor	FALSE	canonical	1	763	junction_1	344101.8087157137	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	246	2057	25.0	-9868	False	AATAAA	-21
PB.4656.2	chr17	+	2785	16	novel_in_catalog	RPA1	novel	577	6	NA	NA	-13	530	no_combination_of_known_junctions	FALSE	canonical	1	6901	junction_5	300707.6394659474	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	137	1894	20.0	-5	True	AATAAA	-18
PB.4910.2	chr17	-	2411	4	full-splice_match	SLFN12	ENST00000452764.3	2423	4	19	-7	19	-4	multi-exon	FALSE	canonical	1	28520	junction_3	21528.021697829605	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	401	2137	40.0	-9	False	AATAAA	-24
PB.4910.5	chr17	-	2548	6	novel_in_catalog	SLFN12	novel	2539	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	6293	junction_4	27139.309700874855	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	545	2281	45.0	60	False	AATAAA	-17
PB.4910.4	chr17	-	2438	5	novel_in_catalog	SLFN12	novel	2539	6	NA	NA	-23	4	combination_of_known_junctions	FALSE	canonical	1	36768	junction_4	16182.82165600301	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	429	2165	40.0	33	False	AATAAA	-23
PB.4910.6	chr17	-	7299	1	novel_in_catalog	SLFN12	novel	2539	6	NA	NA	2	-3044	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-5	True	NA	NA
PB.5595.2	chr19	-	2953	1	full-splice_match	DIRAS1	ENST00000585334.1	774	1	385	-2564	385	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	82	249	63	311	10.0	3897	False	AATAAA	-25
PB.5595.1	chr19	-	3381	2	full-splice_match	DIRAS1	ENST00000323469.4	3424	2	42	1	-35	-1	multi-exon	FALSE	canonical	1	55368	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	143	739	10.0	-5	True	AATAAA	-25
PB.9297.3	chr5	+	4515	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	65	5	1	-5	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	92	2758	45.0	12	True	AGTAAA	-23
PB.765.1	chr1	-	1927	13	novel_in_catalog	ILF2	novel	1906	14	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1632815	junction_10	1091100.513273522	NA	3	NA	TRUE	NA	NA	NA	C	coding	275	828	66	893	25.0	-1	True	AATAAA	-19
PB.8763.10	chr4	-	2327	5	incomplete-splice_match	GNPDA2	ENST00000507534.5	1050	6	-65	3397	0	227	3prime_fragment	FALSE	canonical	1	18446	junction_4	81059.41997232648	NA	5	NA	TRUE	NA	NA	NA	C	coding	189	570	202	771	20.0	29	False	AATAAA	-14
PB.9297.1	chr5	+	3734	19	full-splice_match	HMGCR	ENST00000343975.9	3681	19	-59	6	5	-6	multi-exon	TRUE	canonical	1	96707	junction_12	174780.20293817922	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	152	2659	30.0	-218	False	AATAAA	-20
PB.9222.2	chr5	+	7678	30	full-splice_match	ITGA2	ENST00000296585.9	7869	30	-4	195	-4	-195	multi-exon	FALSE	canonical	1	125089	junction_6	27789.456264419015	NA	8	NA	TRUE	NA	NA	NA	C	coding	1181	3546	148	3693	40.0	-2	True	AATAAA	-15
PB.11777.2	chr9	+	4986	26	full-splice_match	RABGAP1	ENST00000373647.8	4997	26	8	3	-3	-3	multi-exon	FALSE	canonical	1	51684	junction_1	93509.29303348625	NA	2	NA	TRUE	NA	NA	NA	C	coding	1069	3210	127	3336	40.0	-3	True	ATTAAA	-16
PB.7164.14	chr20	-	5296	18	novel_in_catalog	GPCPD1	novel	5489	20	NA	NA	0	-5	no_combination_of_known_junctions	FALSE	canonical	1	4518	junction_17	116355.90818339819	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	604	2079	35.0	-31	True	AATAAA	-11
PB.10937.3	chr7	+	1703	9	full-splice_match	NUB1	ENST00000468404.5	1703	9	7	-7	-1	7	multi-exon	TRUE	canonical	1	60621	junction_8	252399.5050494107	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	39	842	20.0	-1	True	NA	NA
PB.3995.1	chr15	-	1145	1	full-splice_match	IMP3	ENST00000403490.2	1237	1	92	0	92	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	184	555	64	618	10.0	-8	True	AATAAA	-32
PB.10142.12	chr6	-	2481	21	full-splice_match	SEC63	ENST00000369002.8	6411	21	250	3680	-8	-671	multi-exon	FALSE	canonical	1	53587	junction_1	210502.28907472716	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	99	2213	25.0	6340	False	AATAAA	-22
PB.9363.1	chr5	+	1323	3	full-splice_match	FAM174A	ENST00000312637.4	1356	3	30	3	30	-3	multi-exon	FALSE	canonical	1	228822	junction_2	47542.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	190	573	197	769	35.0	-39	True	AATAAA	-20
PB.7806.4	chr22	-	1456	9	full-splice_match	SLC25A17	ENST00000435456.6	2262	9	15	791	0	68	multi-exon	FALSE	canonical	1	250325	junction_8	51012.79279749346	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	120	1043	25.0	-31	True	NA	NA
PB.488.7	chr1	+	1968	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	56	964	-25	701	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	202	1215	35.0	0	True	AATAAA	-26
PB.6977.1	chr2	-	2936	8	full-splice_match	PLEKHM3	ENST00000427836.7	9807	8	14	6857	14	-6855	multi-exon	FALSE	canonical	1	32304	junction_7	6453.046289014458	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	477	2762	15.0	-20	True	NA	NA
PB.488.5	chr1	+	3553	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	8	-573	8	573	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	250	1263	30.0	0	True	ATTAAA	-22
PB.488.2	chr1	+	2863	3	novel_in_catalog	DNAJB4	novel	949	3	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	12573	junction_1	190422.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	480	1148	25.0	8	True	NA	NA
PB.7806.1	chr22	-	2241	9	full-splice_match	SLC25A17	ENST00000435456.6	2262	9	22	-1	7	1	multi-exon	FALSE	canonical	1	250325	junction_8	51012.79279749346	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	113	1036	20.0	-24	True	ATTAAA	-19
PB.7806.2	chr22	-	1952	9	full-splice_match	SLC25A17	ENST00000435456.6	2262	9	31	279	-1	179	multi-exon	FALSE	canonical	1	250325	junction_8	51012.79279749346	NA	10	NA	TRUE	NA	NA	NA	C	coding	307	924	104	1027	20.0	-15	True	AATAAA	-17
PB.7806.3	chr22	-	1775	9	full-splice_match	SLC25A17	ENST00000435456.6	2262	9	30	457	-2	1	multi-exon	FALSE	canonical	1	250325	junction_8	51012.79279749346	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	105	1028	55.0	-16	True	AATAAA	-12
PB.5375.1	chr18	-	3847	20	full-splice_match	EPB41L3	ENST00000540638.6	3370	20	227	-704	-87	-3	multi-exon	FALSE	canonical	1	81474	junction_19	129086.79155288618	NA	0	NA	TRUE	NA	NA	NA	A	coding	865	2598	154	2751	30.0	200	False	AATAAA	-17
PB.488.9	chr1	+	2269	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	68	651	-13	-651	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	190	1203	10.0	12	True	AATATA	-15
PB.6912.5	chr2	+	3511	6	novel_in_catalog	NABP1	novel	855	3	NA	NA	3	3	intron_retention	FALSE	canonical	1	140656	junction_3	119415.16730901481	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	2032	2337	20.0	-6	True	AATAAA	-25
PB.9179.1	chr5	-	3364	12	full-splice_match	NADK2	ENST00000282512.7	2507	12	-29	-828	-29	0	multi-exon	FALSE	canonical	1	9133	junction_11	97204.62554284967	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	266	1105	15.0	-153	False	AATAAA	-16
PB.9179.3	chr5	-	2144	12	full-splice_match	NADK2	ENST00000381937.8	2243	12	101	-2	101	2	multi-exon	FALSE	canonical	1	159596	junction_11	60966.66758277641	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	389	1228	15.0	-64	True	AATAAA	-16
PB.9179.2	chr5	-	3454	12	full-splice_match	NADK2	ENST00000381937.8	2243	12	133	-1344	133	-1	multi-exon	FALSE	canonical	1	159596	junction_11	60966.66758277641	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	357	1196	20.0	-32	True	AATAAA	-15
PB.4143.3	chr16	+	3587	21	novel_in_catalog	CHTF18	novel	3555	24	NA	NA	-2	0	intron_retention	FALSE	canonical	1	9094	junction_1	95099.42519836806	NA	3	NA	TRUE	NA	NA	NA	C	coding	707	2124	1367	3490	25.0	-4	True	TATAAA	-21
PB.6174.5	chr19	-	3838	5	novel_in_catalog	ZNF615	novel	4094	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	7422	junction_4	26804.92505585494	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	48	2291	25.0	-17	True	NA	NA
PB.10591.5	chr7	+	3295	3	novel_in_catalog	GTF2IP4	novel	3609	24	NA	NA	26708	10	intron_retention	FALSE	canonical	1	211574	junction_2	170103.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-24
PB.10591.1	chr7	+	3331	24	full-splice_match	GTF2IP4	ENST00000544802.5	3609	24	289	-11	289	11	multi-exon	FALSE	canonical	1	1951	junction_1	157391.68869866597	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	579	2171	15.0	224	False	AATAAA	-25
PB.7820.2	chr22	-	3234	7	novel_not_in_catalog	DESI1	novel	3833	6	NA	NA	37	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	316743.8403823173	NA	0	NA	TRUE	NA	NA	NA	B	coding	209	630	221	850	15.0	-23	True	AATAAA	-19
PB.6772.14	chr2	-	2431	13	novel_in_catalog	ORC4	novel	6472	13	NA	NA	-3	1052	intron_retention	FALSE	canonical	1	233409	junction_12	76074.81329896394	NA	2	1	TRUE	NA	NA	NA	C	coding	334	1005	126	1130	25.0	-4	True	AATAAA	-21
PB.10230.4	chr6	+	2304	1	antisense	novelGene_MAP3K5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.10230.2	chr6	+	1193	2	antisense	novelGene_MAP3K5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	41234	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.10230.3	chr6	+	2447	2	antisense	novelGene_MAP3K5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	41234	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-2	True	ATTAAA	-13
PB.10230.1	chr6	+	1605	2	antisense	novelGene_MAP3K5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	41234	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	2	True	ATTAAA	-17
PB.2808.5	chr12	-	2901	16	novel_in_catalog	CEP83	novel	705	5	NA	NA	26	2	intron_retention	FALSE	canonical	1	20131	junction_14	36055.00394021458	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	579	2372	20.0	533	False	ATTAAA	-16
PB.2808.4	chr12	-	3079	16	full-splice_match	CEP83	ENST00000339839.9	3130	16	49	2	49	-2	multi-exon	FALSE	canonical	1	61552	junction_15	28374.08569052637	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	467	2548	25.0	-31	True	ATTAAA	-18
PB.2808.7	chr12	-	5334	10	incomplete-splice_match	CEP83	ENST00000339839.9	3130	16	56	55958	56	4160	3prime_fragment	FALSE	canonical	1	61552	junction_9	31313.374112685266	NA	2	NA	TRUE	NA	NA	NA	C	coding	453	1362	460	1821	30.0	-24	True	NA	NA
PB.2808.6	chr12	-	2710	16	full-splice_match	CEP83	ENST00000339839.9	3130	16	95	325	95	222	multi-exon	FALSE	canonical	1	61552	junction_15	28374.08569052637	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2082	421	2502	45.0	602	False	ATTAAA	-17
PB.2808.1	chr12	-	2803	17	novel_in_catalog	CEP83	novel	705	5	NA	NA	62	61	intron_retention	FALSE	canonical	1	12273	junction_1	36165.93267274942	NA	1	1	TRUE	NA	NA	NA	C	coding	693	2082	454	2535	20.0	-18	True	AATAAA	-20
PB.10220.8	chr6	+	3031	19	novel_in_catalog	EYA4	novel	2411	19	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	1	11302	junction_18	14526.609039030393	NA	2	NA	TRUE	NA	NA	NA	C	coding	622	1869	446	2314	95.0	13	True	NA	NA
PB.2808.3	chr12	-	3199	17	full-splice_match	CEP83	ENST00000397809.9	3773	17	-12	586	-12	-2	multi-exon	FALSE	canonical	1	28705	junction_16	36615.19726488025	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	587	2668	25.0	16	True	ATTAAA	-18
PB.2808.2	chr12	-	3402	16	full-splice_match	CEP83	ENST00000339839.9	3130	16	-35	-237	7	237	multi-exon	FALSE	canonical	1	61552	junction_15	28374.08569052637	NA	2	NA	TRUE	NA	NA	NA	C	coding	693	2082	551	2632	20.0	-1	True	NA	NA
PB.10220.5	chr6	+	3189	19	full-splice_match	EYA4	ENST00000525849.6	2767	19	-287	-135	-7	135	multi-exon	FALSE	canonical	1	23365	junction_18	9826.730343655187	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	472	2322	20.0	-13	True	AATAAA	-18
PB.7820.3	chr22	-	3295	7	novel_not_in_catalog	DESI1	novel	3833	6	NA	NA	33	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	294249.37054615014	NA	2	NA	TRUE	NA	NA	NA	B	coding	168	507	225	731	15.0	-27	True	AATAAA	-18
PB.2516.9	chr12	+	2423	5	full-splice_match	FGFR1OP2	ENST00000546072.5	956	5	-18	-1449	-2	1449	multi-exon	FALSE	canonical	1	254465	junction_1	104187.99691663143	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	247	765	35.0	9	True	ATTAAA	-12
PB.10220.6	chr6	+	4106	19	novel_not_in_catalog	EYA4	novel	2411	19	NA	NA	1	-1121	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	16926.627991801543	NA	2	1	TRUE	NA	NA	NA	C	coding	589	1770	458	2227	25.0	1	True	AATAAA	-26
PB.2808.9	chr12	-	3048	8	incomplete-splice_match	CEP83	ENST00000339839.9	3130	16	17	60116	17	2	3prime_fragment	FALSE	canonical	1	61552	junction_7	25853.85516904666	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	499	1533	10.0	524	False	AATAAA	-17
PB.2808.8	chr12	-	3426	11	incomplete-splice_match	CEP83	ENST00000397809.9	3773	17	110	58455	104	2247	3prime_fragment	FALSE	canonical	1	28705	junction_10	41614.15933177072	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	465	1826	80.0	611	False	NA	NA
PB.10220.3	chr6	+	2437	19	novel_not_in_catalog	EYA4	novel	2411	19	NA	NA	-18	-2541	any annotated donor/acceptor	FALSE	canonical	1	1526	junction_18	13365.490364907846	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	203	1978	20.0	-2	True	AATAAA	-15
PB.10220.2	chr6	+	5687	19	full-splice_match	EYA4	ENST00000431403.3	2973	19	-117	-2597	-50	7	multi-exon	FALSE	canonical	1	11302	junction_18	13245.273538553709	NA	2	NA	TRUE	NA	NA	NA	C	coding	616	1851	515	2365	15.0	0	True	AATAAA	-37
PB.8227.3	chr3	-	2525	20	novel_in_catalog	FOXP1	novel	8994	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	1618	junction_19	115019.31530032304	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	459	2489	90.0	-7	True	AATGAA	-7
PB.2516.8	chr12	+	2923	7	full-splice_match	FGFR1OP2	ENST00000229395.7	2924	7	96	-95	-2	-2	multi-exon	FALSE	canonical	1	120425	junction_5	131012.53764864984	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	247	1008	25.0	9	True	ATTAAA	-20
PB.873.4	chr1	-	1907	8	novel_not_in_catalog	B4GALT3	novel	1911	8	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	41422	junction_1	165619.31054668472	NA	2	NA	TRUE	NA	NA	NA	C	coding	310	933	246	1178	10.0	-14	True	AATAAA	-15
PB.1.3	chr1	-	7529	11	novel_not_in_catalog	WASH7P	novel	1351	11	NA	NA	223	-3	any annotated donor/acceptor	FALSE	canonical	1	457	junction_9	11199.260763103966	NA	4	NA	TRUE	NA	NA	NA	B	coding	165	498	5899	6396	35.0	NA	False	AATAAA	-12
PB.10498.1	chr7	+	2662	5	full-splice_match	RALA	ENST00000005257.6	2880	5	210	8	128	-8	multi-exon	FALSE	canonical	1	302898	junction_3	205236.88578688772	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	171	791	25.0	-7	True	AATAAA	-12
PB.11357.10	chr8	-	4392	31	novel_not_in_catalog	PTK2	novel	4955	32	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	179148.42476145923	NA	22	2	TRUE	NA	NA	NA	C	coding	885	2658	452	3109	15.0	795	False	ATTAAA	-29
PB.578.8	chr1	+	5274	26	novel_in_catalog	RNPC3	novel	2013	15	NA	NA	-5	24286	intron_retention	FALSE	canonical	1	10436	junction_25	87137.51284946341	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	106	1659	45.0	0	True	ATTAAA	-12
PB.8199.8	chr3	+	1542	6	full-splice_match	RPP14	ENST00000445193.7	7985	6	243	6200	195	717	multi-exon	FALSE	canonical	1	52206	junction_1	103993.77841698032	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	661	1167	100.0	-73	False	NA	NA
PB.8199.9	chr3	+	2282	6	novel_not_in_catalog	RPP14	novel	531	5	NA	NA	210	-539	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	145074.89902474516	NA	2	1	TRUE	NA	NA	NA	C	coding	168	507	548	1054	25.0	-19	True	ATTAAA	-14
PB.4825.1	chr17	+	2886	7	full-splice_match	MAPK7	ENST00000308406.9	3149	7	262	1	-9	-1	multi-exon	FALSE	canonical	1	22228	junction_1	58018.00453427272	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2451	125	2575	20.0	-793	False	AATACA	-19
PB.4825.2	chr17	+	2850	7	full-splice_match	MAPK7	ENST00000395602.8	3059	7	208	1	-7	0	multi-exon	FALSE	canonical	1	30862	junction_1	55368.109673399136	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	88	2538	20.0	-315	False	AATACA	-20
PB.4825.3	chr17	+	2904	7	full-splice_match	MAPK7	ENST00000395604.7	3077	7	172	1	-9	0	multi-exon	FALSE	canonical	1	30173	junction_1	55577.372404003894	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	142	2592	20.0	-3	True	AATACA	-20
PB.8199.4	chr3	+	2903	6	full-splice_match	RPP14	ENST00000295959.9	3121	6	-13	231	0	-231	multi-exon	FALSE	canonical	1	73130	junction_1	96680.04606204944	NA	3	NA	TRUE	NA	NA	NA	C	coding	168	507	670	1176	45.0	0	True	AATAAA	-25
PB.8199.5	chr3	+	1893	6	full-splice_match	RPP14	ENST00000295959.9	3121	6	-13	1241	0	-672	multi-exon	FALSE	canonical	1	73130	junction_1	96680.04606204944	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	670	1176	60.0	0	True	NA	NA
PB.8199.6	chr3	+	2240	6	full-splice_match	RPP14	ENST00000295959.9	3121	6	-9	890	4	-321	multi-exon	FALSE	canonical	1	73130	junction_1	96680.04606204944	NA	3	NA	TRUE	NA	NA	NA	C	coding	168	507	666	1172	25.0	4	True	AATGAA	-16
PB.8199.7	chr3	+	1664	5	full-splice_match	HTD2	ENST00000461393.5	1508	5	-235	79	13	11	multi-exon	FALSE	canonical	1	36224	junction_1	121317.98224990185	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	783	1289	100.0	23	True	NA	NA
PB.5614.1	chr19	-	5099	18	full-splice_match	PIP5K1C	ENST00000335312.7	5080	18	-17	-2	-17	2	multi-exon	FALSE	canonical	1	73257	junction_2	74418.01720288108	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	107	2113	0.0	-29	True	AATAAA	-17
PB.1670.1	chr10	-	3887	1	incomplete-splice_match	RAB11FIP2	ENST00000355624.7	6061	5	37799	2	6306	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-1640	False	ATTAAA	-13
PB.5614.2	chr19	-	4994	17	full-splice_match	PIP5K1C	ENST00000539785.5	2289	17	-13	-2692	1	-1	multi-exon	FALSE	canonical	1	116872	junction_1	66508.23825556782	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	89	2011	5.0	-11	True	AATAAA	-14
PB.5923.1	chr19	-	2698	9	full-splice_match	LGI4	ENST00000310123.7	2814	9	116	0	116	0	multi-exon	FALSE	canonical	1	26668	junction_2	30078.01740474262	NA	2	NA	TRUE	NA	NA	NA	A	coding	537	1614	405	2018	10.0	12	True	AATAAA	-17
PB.578.9	chr1	+	5153	25	novel_in_catalog	RNPC3	novel	2013	15	NA	NA	-3	24286	intron_retention	FALSE	canonical	1	10436	junction_24	88638.67616221447	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	104	1657	45.0	2	True	ATTAAA	-12
PB.5558.9	chr19	+	3497	13	full-splice_match	ARHGAP45	ENST00000590577.2	3218	13	-778	499	-778	133	multi-exon	FALSE	canonical	1	379719	junction_7	82815.38081425287	NA	1	NA	TRUE	NA	NA	NA	C	coding	771	2316	1059	3374	20.0	-6173	False	NA	NA
PB.12364.11	chrX	+	2742	10	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	48794.98429597498	NA	2	NA	TRUE	NA	NA	NA	B	coding	233	702	173	874	35.0	3	True	NA	NA
PB.12364.12	chrX	+	2399	10	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	-5	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48996.032236432984	NA	3	1	TRUE	NA	NA	NA	B	coding	233	702	180	881	60.0	3	True	NA	NA
PB.12364.13	chrX	+	3635	2	incomplete-splice_match	BRCC3	ENST00000399026.1	456	3	-1859	6	20	-6	intron_retention	FALSE	canonical	1	69596	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	42	False	ATTAAA	-9
PB.9379.7	chr5	+	2232	12	novel_in_catalog	FER	novel	12119	20	NA	NA	-12	-89444	combination_of_known_junctions	FALSE	canonical	1	34628	junction_1	24281.397507672824	NA	6	3	TRUE	NA	NA	NA	B	coding	533	1602	250	1851	30.0	0	True	AATAAA	-12
PB.9917.1	chr6	-	4186	7	novel_in_catalog	RXRB	novel	2846	10	NA	NA	-25	-1	intron_retention	FALSE	canonical	1	186815	junction_6	130033.4723728215	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	1299	2039	25.0	2	True	ATTAAA	-16
PB.9379.5	chr5	+	2671	19	novel_in_catalog	FER	novel	12119	20	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	19396	junction_1	23256.06392182053	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	106	2574	25.0	-2	True	AATGAA	-20
PB.9379.4	chr5	+	2817	20	novel_in_catalog	FER	novel	12119	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	34628	junction_1	21393.680151544584	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	252	2720	25.0	-2	True	AATGAA	-20
PB.9379.3	chr5	+	2890	6	novel_not_in_catalog	FER	novel	12119	20	NA	NA	-19	22296	any annotated donor/acceptor	FALSE	canonical	1	560	junction_5	42495.09125816769	NA	0	NA	TRUE	NA	NA	NA	B	coding	186	561	257	817	40.0	-7	True	NA	NA
PB.9379.2	chr5	+	3331	20	novel_not_in_catalog	FER	novel	12119	20	NA	NA	-20	112	any annotated donor/acceptor	FALSE	canonical	1	510	junction_19	29977.064980911757	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	112	2580	85.0	-8	True	NA	NA
PB.9379.1	chr5	+	3479	21	novel_not_in_catalog	FER	novel	12119	20	NA	NA	-22	112	any annotated donor/acceptor	FALSE	canonical	1	510	junction_20	28225.778548119804	NA	1	1	TRUE	NA	NA	NA	B	coding	822	2469	260	2728	85.0	-10	True	NA	NA
PB.26.1	chr1	+	3311	1	genic	FO704657.1	novel	NA	NA	NA	NA	-35	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	137	414	2631	3044	20.0	NA	False	ATTAAA	-20
PB.9917.3	chr6	-	2616	10	full-splice_match	RXRB	ENST00000374680.3	2908	10	291	1	217	-1	multi-exon	FALSE	canonical	1	186815	junction_9	123481.42253706741	NA	1	NA	TRUE	NA	NA	NA	C	coding	506	1521	3	1523	25.0	-7	True	ATTAAA	-16
PB.9379.9	chr5	+	3516	20	novel_in_catalog	FER	novel	12119	20	NA	NA	2	112	combination_of_known_junctions	FALSE	canonical	1	34628	junction_1	21393.680151544584	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	236	2704	85.0	14	True	NA	NA
PB.9379.8	chr5	+	3372	19	novel_in_catalog	FER	novel	12119	20	NA	NA	0	112	no_combination_of_known_junctions	FALSE	canonical	1	19396	junction_1	23256.06392182053	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	92	2560	85.0	12	True	NA	NA
PB.9917.2	chr6	-	2348	9	full-splice_match	RXRB	ENST00000483281.5	1977	9	261	-632	238	0	multi-exon	FALSE	canonical	1	13931	junction_8	158287.47410072442	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	460	1254	25.0	14	True	ATTAAA	-17
PB.7029.10	chr2	-	1762	15	full-splice_match	DNPEP	ENST00000373966.5	1875	15	114	-1	0	-1	multi-exon	FALSE	canonical	1	42950	junction_14	216917.37079472194	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	250	1665	15.0	-3	True	ATTAAA	-17
PB.6604.22	chr2	+	2883	22	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	-9	904	intron_retention	FALSE	canonical	1	16498	junction_10	176502.00003730858	NA	3	1	TRUE	NA	NA	NA	C	coding	293	882	1776	2657	25.0	0	True	ATTAAA	-16
PB.9917.5	chr6	-	3496	8	novel_in_catalog	RXRB	novel	2846	10	NA	NA	23	-2	intron_retention	FALSE	canonical	1	186815	junction_7	142759.0293240712	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	271	1338	25.0	-1	True	ATTAAA	-15
PB.6604.20	chr2	+	1894	1	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	7	-799	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-2	True	NA	NA
PB.7300.2	chr20	+	1657	14	full-splice_match	IFT52	ENST00000373039.4	1599	14	-59	1	0	-1	multi-exon	FALSE	canonical	1	104199	junction_1	88297.63864962976	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	106	1419	30.0	-6	True	ATTAAA	-31
PB.6604.26	chr2	+	2629	23	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	-7	1312	combination_of_known_junctions	FALSE	canonical	1	22224	junction_11	168183.60832995677	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	1003	1995	20.0	2	True	AATATA	-33
PB.6604.27	chr2	+	2575	22	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	-7	1312	any annotated donor/acceptor	FALSE	canonical	1	3517	junction_12	193587.32772632016	NA	4	NA	TRUE	NA	NA	NA	C	coding	312	939	1003	1941	20.0	2	True	AATATA	-33
PB.6604.24	chr2	+	2550	23	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	-9	1304	no_combination_of_known_junctions	FALSE	canonical	1	3084	junction_22	170225.49302941505	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	14	1924	35.0	0	True	AATATA	-25
PB.9917.4	chr6	-	2901	10	full-splice_match	RXRB	ENST00000374685.8	2846	10	-57	2	17	-2	multi-exon	FALSE	canonical	1	186815	junction_9	131098.3400867691	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	277	1809	25.0	-7	True	ATTAAA	-15
PB.2013.1	chr11	-	3911	1	incomplete-splice_match	C11orf95	ENST00000433688.2	5716	5	4971	2	2148	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	88	267	121	387	5.0	5419	False	AATAAA	-23
PB.3348.1	chr14	-	2544	5	incomplete-splice_match	CHMP4A	ENST00000530996.5	967	6	14	-7	13	7	intron_retention	FALSE	canonical	1	921828	junction_1	144669.73372024813	NA	2	NA	TRUE	NA	NA	NA	A	coding	117	354	1931	2284	25.0	12	True	AATAAA	-14
PB.8762.4	chr4	+	3726	15	novel_in_catalog	GUF1	novel	3970	16	NA	NA	159	0	no_combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	71031.00533857144	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	946	1728	25.0	-20	True	NA	NA
PB.8762.5	chr4	+	4565	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	-7	-109	-5	109	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	202	2211	25.0	-31	True	NA	NA
PB.8762.6	chr4	+	4005	17	novel_in_catalog	GUF1	novel	3970	16	NA	NA	-5	-2	no_combination_of_known_junctions	FALSE	canonical	1	5349	junction_1	62893.11963136225	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	150	2009	20.0	-31	True	NA	NA
PB.8762.7	chr4	+	3972	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	-7	484	-5	-237	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	202	2211	45.0	-31	True	NA	NA
PB.8762.1	chr4	+	4170	15	novel_in_catalog	GUF1	novel	3970	16	NA	NA	-7	-36	no_combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	71031.00533857144	NA	2	NA	TRUE	NA	NA	NA	C	coding	309	930	1032	1961	50.0	-33	True	GATAAA	-40
PB.8762.2	chr4	+	4103	16	novel_in_catalog	GUF1	novel	3970	16	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	60984.74070002176	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	1064	2101	25.0	-33	True	NA	NA
PB.3822.1	chr15	-	3703	28	novel_not_in_catalog	CATSPER2	novel	4049	13	NA	NA	-21921	201	any annotated donor/acceptor	FALSE	canonical	1	11	junction_27	4302.186944427346	NA	0	NA	TRUE	NA	NA	NA	A	coding	1207	3624	65	3688	25.0	NA	False	CATAAA	-15
PB.7656.1	chr22	+	1589	3	full-splice_match	DDTL	ENST00000215770.5	1545	3	-19	-25	-19	25	multi-exon	FALSE	canonical	1	7359	junction_1	2562.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	34	438	40.0	NA	False	NA	NA
PB.9710.1	chr6	+	2667	1	full-splice_match	PPP1R3G	ENST00000405617.3	4907	1	-27	2267	-27	-2267	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	358	1077	933	2009	20.0	-787	False	AGTAAA	-16
PB.1425.1	chr10	-	2371	1	antisense	novelGene_ARID5B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	AAAAAG	-27
PB.7656.2	chr22	+	3003	1	full-splice_match	AC253536.6	ENST00000609736.1	663	1	-2323	-17	-2323	17	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	NA	False	AATAAA	-35
PB.8762.8	chr4	+	3823	14	novel_in_catalog	GUF1	novel	3970	16	NA	NA	-5	0	no_combination_of_known_junctions	FALSE	canonical	1	2951	junction_10	90895.66969388911	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	1475	1825	25.0	-31	True	NA	NA
PB.8762.9	chr4	+	2488	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	-7	1968	-5	-1721	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	202	2211	30.0	-31	True	NA	NA
PB.11625.9	chr9	-	2847	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-25	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	871364.6751391445	NA	4	1	TRUE	NA	NA	NA	B	coding	439	1320	205	1524	15.0	-8	True	AATATA	-13
PB.11625.8	chr9	-	2765	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	3	1	TRUE	NA	NA	NA	B	coding	457	1374	221	1594	20.0	-17	True	AATAAA	-19
PB.8130.3	chr3	+	3159	15	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-18	0	intron_retention	FALSE	canonical	1	90943	junction_8	66117.35949793815	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	95	1531	25.0	-24	True	AATAAA	-36
PB.8130.1	chr3	+	3250	19	novel_not_in_catalog	U73166.1	novel	2625	2	NA	NA	-289	13801	any annotated donor/acceptor	FALSE	canonical	1	3669	junction_2	102859.13947412756	NA	8	1	TRUE	NA	NA	NA	A	coding	748	2247	551	2797	30.0	-9927	False	AATAAA	-34
PB.8130.7	chr3	+	3922	12	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-9	0	intron_retention	FALSE	canonical	1	20362	junction_4	102672.05487979516	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	86	556	25.0	-15	True	AATAAA	-36
PB.8130.6	chr3	+	3301	15	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-17	0	intron_retention	FALSE	canonical	1	109432	junction_7	63111.36476863088	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	1428	2846	25.0	-23	True	AATAAA	-36
PB.8130.5	chr3	+	2646	16	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	20419	junction_13	89704.08450341353	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	95	1711	10.0	-24	True	AATAAA	-44
PB.8130.4	chr3	+	2902	17	novel_not_in_catalog	SEMA3B	novel	934	7	NA	NA	-18	-2	any annotated donor/acceptor	FALSE	canonical	1	31	junction_1	91759.23661610908	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	95	2449	30.0	-24	True	AATAAA	-34
PB.5626.2	chr19	-	1914	11	full-splice_match	UBXN6	ENST00000301281.10	1943	11	28	1	28	0	multi-exon	FALSE	canonical	1	575518	junction_10	266204.717645349	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	98	1423	5.0	-1	True	AATAAA	-17
PB.970.10	chr1	-	2947	8	full-splice_match	STX6	ENST00000258301.5	4851	8	-36	1940	-36	-1626	multi-exon	FALSE	canonical	1	284881	junction_2	32878.787382053575	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	275	1042	35.0	-79	True	ATTAAA	-21
PB.8130.9	chr3	+	2933	15	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	10002	junction_2	93260.69603516953	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	1053	2471	10.0	-13	True	AATAAA	-43
PB.5626.1	chr19	-	1932	11	novel_not_in_catalog	UBXN6	novel	1613	9	NA	NA	21	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	416129.9826909376	NA	2	1	TRUE	NA	NA	NA	C	coding	388	1167	275	1441	5.0	-8	True	AATAAA	-17
PB.970.11	chr1	-	2623	8	full-splice_match	STX6	ENST00000258301.5	4851	8	-14	2242	-14	-1928	multi-exon	FALSE	canonical	1	284881	junction_2	32878.787382053575	NA	6	NA	TRUE	NA	NA	NA	C	coding	255	768	253	1020	35.0	-57	True	AATAAA	-16
PB.3818.9	chr15	+	2382	18	full-splice_match	TUBGCP4	ENST00000564079.5	6798	18	-29	4445	13	-2	multi-exon	FALSE	canonical	1	119818	junction_12	27048.000463228767	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	270	2270	15.0	-15	True	AATAAA	-21
PB.3818.8	chr15	+	2937	18	full-splice_match	TUBGCP4	ENST00000564079.5	6798	18	-33	3894	9	304	multi-exon	FALSE	canonical	1	119818	junction_12	27048.000463228767	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	274	2274	65.0	-19	True	NA	NA
PB.3692.6	chr14	+	4569	22	incomplete-splice_match	INF2	ENST00000392634.8	4672	23	11719	1	-6508	-1	5prime_fragment	FALSE	canonical	1	261692	junction_20	112936.9220727652	NA	0	NA	TRUE	NA	NA	NA	C	coding	1249	3750	11	3760	10.0	-6021	False	AATAAA	-10
PB.3818.5	chr15	+	3104	18	full-splice_match	TUBGCP4	ENST00000260383.11	2617	18	-20	-467	8	467	multi-exon	FALSE	canonical	1	56127	junction_12	36886.121088493666	NA	1	1	TRUE	NA	NA	NA	C	coding	667	2004	275	2278	100.0	-20	True	NA	NA
PB.3818.4	chr15	+	2438	18	novel_in_catalog	TUBGCP4	novel	544	4	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	4601	junction_2	53657.44019780775	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	737	2332	20.0	-26	True	AATAAA	-15
PB.3818.7	chr15	+	2455	19	novel_in_catalog	TUBGCP4	novel	544	4	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	1	17935	junction_13	54035.34834716993	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	275	1708	25.0	-20	True	AATAAA	-26
PB.3818.6	chr15	+	2987	17	novel_in_catalog	TUBGCP4	novel	544	4	NA	NA	8	467	combination_of_known_junctions	FALSE	canonical	1	5955	junction_15	54942.10315353421	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	275	2161	100.0	-20	True	NA	NA
PB.3818.1	chr15	+	3181	18	novel_in_catalog	TUBGCP4	novel	544	4	NA	NA	-24	467	combination_of_known_junctions	TRUE	canonical	1	4601	junction_2	48129.60343621518	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	763	2355	100.0	-185	False	NA	NA
PB.3818.3	chr15	+	2580	18	full-splice_match	TUBGCP4	ENST00000260383.11	2617	18	-33	70	-5	-41	multi-exon	FALSE	canonical	1	56127	junction_12	36886.121088493666	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	288	2291	20.0	-33	True	NA	NA
PB.873.1	chr1	-	2135	9	novel_in_catalog	B4GALT3	novel	1911	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3456	junction_8	237497.48781983857	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	449	1630	10.0	-4	True	AATAAA	-15
PB.7017.2	chr2	+	2019	3	novel_in_catalog	WNT10A	novel	2547	4	NA	NA	142	-6	combination_of_known_junctions	FALSE	canonical	1	6396	junction_2	35950.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	492	1391	45.0	-1	True	NA	NA
PB.7017.3	chr2	+	2204	4	full-splice_match	WNT10A	ENST00000258411.7	2547	4	144	199	144	-199	multi-exon	FALSE	canonical	1	78296	junction_1	10150.588390170624	NA	5	NA	TRUE	NA	NA	NA	C	coding	417	1254	490	1743	20.0	1	True	CATAAA	-25
PB.4712.1	chr17	-	3052	19	novel_in_catalog	KIAA0753	novel	508	4	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	3217	junction_1	30923.872441294156	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	133	2934	20.0	29	False	NA	NA
PB.4712.3	chr17	-	4800	19	novel_in_catalog	KIAA0753	novel	508	4	NA	NA	0	-180	combination_of_known_junctions	FALSE	canonical	1	4885	junction_15	33528.74696569357	NA	10	NA	TRUE	NA	NA	NA	C	coding	668	2007	1378	3384	35.0	18	False	AATAAA	-12
PB.4712.2	chr17	-	4480	19	full-splice_match	KIAA0753	ENST00000361413.7	4859	19	216	163	0	-163	multi-exon	FALSE	canonical	1	44811	junction_18	24738.26475352368	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	144	3047	35.0	18	False	AATAAA	-29
PB.3605.19	chr14	+	3537	17	full-splice_match	ZC3H14	ENST00000251038.9	18281	17	127	14617	-2	0	multi-exon	FALSE	canonical	1	281539	junction_10	115875.09142065905	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	99	2309	80.0	-27	True	AATAAA	-35
PB.7017.1	chr2	+	2091	4	full-splice_match	WNT10A	ENST00000258411.7	2547	4	450	6	450	-6	multi-exon	FALSE	canonical	1	78296	junction_1	10150.588390170624	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	184	1437	45.0	-2782	False	NA	NA
PB.5250.1	chr17	+	2129	11	novel_in_catalog	TSEN54	novel	627	5	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	22470	junction_8	99856.03578051754	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	38	1726	10.0	-12	True	ATTAAA	-16
PB.5250.3	chr17	+	2018	7	incomplete-splice_match	TSEN54	ENST00000333213.10	1944	11	4	1866	3	-414	intron_retention	FALSE	canonical	1	106376	junction_1	80850.18782428537	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	713	1684	80.0	-7	True	NA	NA
PB.5250.2	chr17	+	1941	11	full-splice_match	TSEN54	ENST00000333213.10	1944	11	1	2	0	-2	multi-exon	FALSE	canonical	1	106376	junction_1	81158.1557488833	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	36	1616	10.0	-10	True	ATTAAA	-18
PB.11706.1	chr9	-	2959	5	full-splice_match	KLF4	ENST00000374672.4	2813	5	-148	2	-28	0	multi-exon	FALSE	canonical	1	259202	junction_3	123051.09439654529	NA	1	NA	TRUE	NA	NA	NA	A	coding	470	1413	650	2062	25.0	1	True	AATAAA	-19
PB.1297.3	chr10	-	2866	9	novel_not_in_catalog	NUDT5	novel	3433	10	NA	NA	-21	-332	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	374274.755014594	NA	1	1	TRUE	NA	NA	NA	B	coding	164	495	163	657	45.0	0	True	AATAAA	-14
PB.873.2	chr1	-	2114	9	novel_in_catalog	B4GALT3	novel	1911	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3456	junction_8	228594.2450264975	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	428	1609	10.0	-4	True	AATAAA	-15
PB.862.2	chr1	+	2415	10	full-splice_match	LY9	ENST00000263285.10	2443	10	25	3	-4	-3	multi-exon	FALSE	canonical	1	18008	junction_4	13041.284897500622	NA	2	NA	TRUE	NA	NA	NA	C	coding	655	1968	6	1973	30.0	3	True	NA	NA
PB.8946.16	chr4	+	1959	13	full-splice_match	LARP7	ENST00000324052.10	2164	13	66	139	-3	-133	multi-exon	FALSE	canonical	1	149778	junction_1	155851.26168071988	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	85	1833	40.0	-3	True	ATTAAA	-20
PB.862.4	chr1	+	2372	10	full-splice_match	LY9	ENST00000368037.9	2485	10	101	12	-12	-6	multi-exon	FALSE	canonical	1	13704	junction_7	15179.340931381414	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	14	1939	45.0	-5	True	NA	NA
PB.8946.14	chr4	+	2253	11	novel_in_catalog	LARP7	novel	2286	13	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	149778	junction_1	156995.39826771995	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	929	1996	25.0	6	True	AATAAA	-15
PB.5240.1	chr17	-	1430	4	novel_not_in_catalog	JPT1	novel	2289	5	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1308484.6976380306	NA	3	1	TRUE	NA	NA	NA	A	coding	118	357	117	473	25.0	-2	True	AGTAAA	-17
PB.8281.5	chr3	-	3811	18	novel_in_catalog	CBLB	novel	6749	19	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	40574	junction_3	47531.684528217236	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	291	3107	15.0	0	True	AATAAA	-32
PB.8946.15	chr4	+	2141	13	novel_in_catalog	LARP7	novel	2286	13	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	70307	junction_7	202289.49324208335	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	96	1883	25.0	9	True	AATAAA	-16
PB.8946.12	chr4	+	2196	13	full-splice_match	LARP7	ENST00000324052.10	2164	13	-40	8	-40	-2	multi-exon	FALSE	canonical	1	149778	junction_1	155851.26168071988	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	191	1939	25.0	-9660	False	AATAAA	-15
PB.873.3	chr1	-	1932	8	full-splice_match	B4GALT3	ENST00000319769.9	1911	8	-22	1	-10	0	multi-exon	FALSE	canonical	1	302320	junction_6	105803.07340642283	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	246	1427	10.0	-14	True	AATAAA	-15
PB.8946.13	chr4	+	2047	13	novel_in_catalog	LARP7	novel	2286	13	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	1	47621	junction_2	236440.25698242814	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	239	1789	25.0	0	True	AATAAA	-16
PB.1812.1	chr11	+	1907	11	full-splice_match	SWAP70	ENST00000447399.6	3538	11	-15	1646	-15	-316	multi-exon	FALSE	canonical	1	24625	junction_2	182234.17082229664	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	119	1702	75.0	-15	True	NA	NA
PB.8946.10	chr4	+	2330	11	novel_in_catalog	LARP7	novel	2286	13	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	370357	junction_2	121491.73177035546	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	1005	2072	25.0	3	True	AATAAA	-16
PB.9340.2	chr5	-	2150	2	full-splice_match	MBLAC2	ENST00000316610.6	4280	2	357	1773	-33	-1773	multi-exon	FALSE	canonical	1	73874	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	120	959	10.0	-24	True	CATAAA	-12
PB.7310.1	chr20	+	4433	14	novel_in_catalog	PABPC1L	novel	1263	8	NA	NA	-30	-1	intron_retention	FALSE	canonical	1	38352	junction_11	88663.99738805149	NA	1	NA	TRUE	NA	NA	NA	B	coding	330	993	113	1105	10.0	-89	False	ATTAAA	-17
PB.1812.3	chr11	+	2321	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	47	2514	-11	-14	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	57	1814	75.0	-109	False	NA	NA
PB.10687.1	chr7	-	3180	18	full-splice_match	SLC25A13	ENST00000265631.9	3136	18	-45	1	-2	0	multi-exon	FALSE	canonical	1	155172	junction_16	69063.52237065682	NA	2	NA	TRUE	NA	NA	NA	C	coding	675	2028	183	2210	10.0	-3	True	AATAAA	-15
PB.1081.7	chr1	-	2284	7	full-splice_match	FCMR	ENST00000628511.2	1055	7	-80	-1149	-6	516	multi-exon	FALSE	canonical	1	4393	junction_3	146572.34137903826	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	94	1014	20.0	-7	True	AATAGA	-15
PB.10565.5	chr7	+	2067	5	full-splice_match	ZNF273	ENST00000395375.3	3757	5	-22	1712	13	-3	multi-exon	FALSE	canonical	1	25692	junction_1	14400.570672285872	NA	5	NA	TRUE	NA	NA	NA	C	coding	504	1515	337	1851	45.0	-7	True	AATAAA	-14
PB.12390.4	chrY	+	3341	2	incomplete-splice_match	TXLNGY	ENST00000447520.5	832	4	-24	-2	8	2	intron_retention	FALSE	canonical	1	62824	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	141	563	20.0	0	True	AATAAA	-22
PB.10565.3	chr7	+	3721	4	full-splice_match	ZNF273	ENST00000476120.1	2000	4	1	-1722	1	13	multi-exon	FALSE	canonical	1	23890	junction_1	17326.11395809484	NA	6	NA	TRUE	NA	NA	NA	C	coding	569	1710	71	1780	40.0	-62	False	AATAAA	-44
PB.10565.2	chr7	+	5064	5	full-splice_match	ZNF273	ENST00000395375.3	3757	5	-49	-1258	-8	1258	multi-exon	FALSE	canonical	1	25692	junction_1	14400.570672285872	NA	11	NA	TRUE	NA	NA	NA	C	coding	504	1515	364	1878	80.0	-71	False	ATTAAA	-29
PB.10565.1	chr7	+	3835	5	full-splice_match	ZNF273	ENST00000395375.3	3757	5	-72	-6	-31	6	multi-exon	FALSE	canonical	1	25692	junction_1	14400.570672285872	NA	4	NA	TRUE	NA	NA	NA	C	coding	504	1515	387	1901	40.0	-94	False	AATAAA	-37
PB.12390.3	chrY	+	4303	5	novel_in_catalog	TXLNGY	novel	1000	5	NA	NA	8	-3	intron_retention	FALSE	canonical	1	37903	junction_4	16034.906680426924	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	141	536	15.0	0	True	AATAAA	-15
PB.7470.2	chr21	-	2151	4	novel_not_in_catalog	LINC00158	novel	1380	4	NA	NA	-48	1251	any annotated donor/acceptor	FALSE	canonical	1	839	junction_2	22367.508041800276	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	3837	False	AATAAA	-14
PB.7470.1	chr21	-	2062	3	incomplete-splice_match	LINC00158	ENST00000332587.8	1476	5	6965	-1267	-27	1267	5prime_fragment	FALSE	canonical	1	49037	junction_2	1705.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-12	True	AATAAA	-30
PB.1812.4	chr11	+	4802	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	46	34	-12	-34	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	58	1815	40.0	-110	False	ATTAAA	-20
PB.12390.1	chrY	+	2577	3	incomplete-splice_match	TXLNGY	ENST00000459719.6	2098	4	-6	-3	-6	2	intron_retention	FALSE	canonical	1	56118	junction_1	13423.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	243	638	15.0	-14	True	AATAAA	-18
PB.2916.11	chr12	+	3165	12	full-splice_match	TRAFD1	ENST00000257604.9	3178	12	13	0	1	0	multi-exon	FALSE	canonical	1	34094	junction_1	147009.7071411239	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	605	2353	10.0	-2	True	AATAAA	-18
PB.2916.10	chr12	+	2391	12	novel_in_catalog	TRAFD1	novel	2697	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	635	junction_5	156380.91393450715	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	698	1579	10.0	-3	True	AATAAA	-18
PB.3605.16	chr14	+	2451	17	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	26564	junction_12	153195.88367969403	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	120	2315	25.0	5	True	AATATA	-35
PB.8281.7	chr3	-	3655	18	novel_in_catalog	CBLB	novel	6749	19	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	1	40574	junction_3	50251.38670599482	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	136	2952	15.0	368	False	AATAAA	-31
PB.3692.2	chr14	+	4595	24	novel_not_in_catalog	INF2	novel	7578	22	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	310	junction_21	159670.03329764266	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	154	3783	5.0	-22	True	AATAAA	-13
PB.792.1	chr1	+	1511	5	full-splice_match	EFNA1	ENST00000368407.7	1926	5	414	1	-2	-1	multi-exon	TRUE	canonical	1	388078	junction_1	58547.33716617691	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	105	722	15.0	-2	True	AATAAA	-18
PB.2516.3	chr12	+	2547	7	full-splice_match	FGFR1OP2	ENST00000229395.7	2924	7	79	298	-19	-298	multi-exon	FALSE	canonical	1	120425	junction_5	131012.53764864984	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	264	1025	20.0	-8	True	AATAAA	-17
PB.8233.5	chr3	-	2378	7	full-splice_match	FAM86DP	ENST00000484945.5	2238	7	-141	1	12	-1	multi-exon	FALSE	canonical	1	4987	junction_2	36021.794272125495	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	517	978	35.0	-29	False	NA	NA
PB.11485.3	chr9	-	2132	2	full-splice_match	CDKN2B	ENST00000276925.6	3911	2	114	1665	23	635	multi-exon	FALSE	canonical	1	70396	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	297	713	35.0	55	False	AATAAA	-16
PB.11485.2	chr9	-	2411	2	full-splice_match	CDKN2B	ENST00000276925.6	3911	2	27	1473	27	827	multi-exon	FALSE	canonical	1	70396	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	384	800	25.0	-32	False	ATTAAA	-18
PB.10687.3	chr7	-	2917	18	full-splice_match	SLC25A13	ENST00000265631.9	3136	18	25	194	25	-193	multi-exon	FALSE	canonical	1	155172	junction_16	69063.52237065682	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	113	2140	5.0	-1	True	AATAAA	-17
PB.10777.17	chr7	+	1755	7	full-splice_match	BCAP29	ENST00000465919.5	942	7	-2	-811	-2	-20	multi-exon	FALSE	canonical	1	7226	junction_1	214753.5934440653	NA	5	NA	TRUE	NA	NA	NA	C	coding	147	444	249	692	80.0	-2	True	NA	NA
PB.11596.2	chr9	+	3003	13	novel_not_in_catalog	MAMDC2	novel	3616	14	NA	NA	-61554	2	any annotated donor/acceptor	FALSE	canonical	1	150	junction_1	26745.482644530624	NA	1	NA	TRUE	NA	NA	NA	B	coding	640	1923	141	2063	35.0	NA	False	AATAAA	-18
PB.11295.11	chr8	+	3722	14	full-splice_match	OXR1	ENST00000312046.10	4406	14	1	683	1	-5	multi-exon	FALSE	canonical	1	63576	junction_13	91942.40439381589	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	133	2652	80.0	-1	True	NA	NA
PB.10777.14	chr7	+	2812	7	full-splice_match	BCAP29	ENST00000465919.5	942	7	-9	-1861	-9	1030	multi-exon	FALSE	canonical	1	7226	junction_1	214753.5934440653	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	256	699	35.0	-9	True	AATAAA	-18
PB.10446.3	chr7	+	2782	5	novel_not_in_catalog	NFE2L3	novel	3686	4	NA	NA	-31	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	20366.851491762296	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	194	2278	35.0	0	True	AATAAA	-15
PB.10446.2	chr7	+	2841	5	novel_not_in_catalog	NFE2L3	novel	3686	4	NA	NA	-41	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	20366.851491762296	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	253	2337	35.0	-10	True	AATAAA	-15
PB.10446.1	chr7	+	2276	4	full-splice_match	NFE2L3	ENST00000056233.3	3686	4	573	837	573	-29	multi-exon	FALSE	canonical	1	29493	junction_3	11887.795683902976	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	569	1771	35.0	-8554	False	AATAAA	-16
PB.10533.17	chr7	-	2158	10	novel_not_in_catalog	TBRG4	novel	2243	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	570	junction_6	264621.67792674404	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	106	1935	10.0	-1	True	NA	NA
PB.10533.10	chr7	-	2447	10	novel_in_catalog	TBRG4	novel	2243	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	583406	junction_9	121725.86725441519	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	118	1773	10.0	-13	True	NA	NA
PB.10533.11	chr7	-	2231	11	full-splice_match	TBRG4	ENST00000258770.7	2243	11	11	1	3	0	multi-exon	FALSE	canonical	1	583406	junction_10	119000.8842536895	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	112	2007	10.0	-7	True	NA	NA
PB.10533.12	chr7	-	2227	11	novel_not_in_catalog	TBRG4	novel	2243	11	NA	NA	-9	0	intron_retention	FALSE	canonical	1	66680	junction_3	235471.94373149853	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	136	1719	10.0	-31	True	NA	NA
PB.10533.13	chr7	-	2181	11	full-splice_match	TBRG4	ENST00000494076.5	2190	11	9	0	0	0	multi-exon	FALSE	canonical	1	22978	junction_10	245169.0796492086	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	29	1957	10.0	-1	True	NA	NA
PB.7755.2	chr22	-	1991	7	novel_not_in_catalog	MFNG	novel	2034	7	NA	NA	4	1	intron_retention	FALSE	canonical	1	3146	junction_6	143900.82558185305	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	491	1090	10.0	5	True	ATTAAA	-22
PB.3497.21	chr14	+	3807	3	novel_in_catalog	ZBTB1	novel	453	2	NA	NA	24	1046	no_combination_of_known_junctions	FALSE	canonical	1	10478	junction_1	27530.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	368	2509	35.0	-20	True	AATAAA	-12
PB.3497.20	chr14	+	3553	2	incomplete-splice_match	ZBTB1	ENST00000358738.3	4119	3	154	8870	2	922	3prime_fragment	FALSE	canonical	1	163379	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	238	2379	30.0	2	True	TATAAA	-40
PB.3497.22	chr14	+	3420	3	novel_not_in_catalog	ZBTB1	novel	582	2	NA	NA	632	742	any annotated donor/acceptor	FALSE	canonical	1	181	junction_1	4329.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	285	2426	25.0	588	False	AATAAA	-15
PB.6515.4	chr2	-	5659	1	novel_in_catalog	C1D	novel	736	5	NA	NA	1	-10058	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	116	351	3855	4205	85.0	-4	True	NA	NA
PB.733.4	chr1	-	1500	10	novel_in_catalog	CERS2	novel	1618	7	NA	NA	126	-608	no_combination_of_known_junctions	FALSE	canonical	1	5837	junction_4	655334.2943604348	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	84	1133	20.0	-11	True	NA	NA
PB.1591.9	chr10	-	1403	9	full-splice_match	COX15	ENST00000370483.9	2788	9	-35	1420	-35	251	multi-exon	FALSE	canonical	1	15594	junction_1	102069.1035780876	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	87	1253	35.0	-41	True	NA	NA
PB.1591.8	chr10	-	3527	9	full-splice_match	COX15	ENST00000016171.5	2356	9	0	-1171	0	-500	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	52	1284	30.0	-6	True	NA	NA
PB.9691.12	chr6	-	6158	24	novel_not_in_catalog	EXOC2	novel	4449	28	NA	NA	-14	-25357	any annotated donor/acceptor	FALSE	canonical	1	2315	junction_1	63433.48558369456	NA	4	NA	TRUE	NA	NA	NA	C	coding	847	2544	151	2694	20.0	-17	True	AATAAA	-22
PB.9691.13	chr6	-	3407	23	incomplete-splice_match	EXOC2	ENST00000230449.8	4449	28	-16	46461	-16	-46461	3prime_fragment	FALSE	canonical	1	123727	junction_22	42969.68082754965	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	153	2540	25.0	-19	True	GATAAA	-15
PB.9691.10	chr6	-	3290	29	novel_not_in_catalog	EXOC2	novel	4449	28	NA	NA	-4	-971	any annotated donor/acceptor	FALSE	canonical	1	2587	junction_1	58308.01574304842	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	141	2915	20.0	-7	True	ATTAAA	-20
PB.9691.11	chr6	-	3039	28	full-splice_match	EXOC2	ENST00000230449.8	4449	28	-26	1436	-26	-1436	multi-exon	FALSE	canonical	1	123727	junction_27	40263.91137232731	NA	9	NA	TRUE	NA	NA	NA	C	coding	924	2775	163	2937	5.0	-29	True	ATTAAA	-14
PB.1591.3	chr10	-	4025	9	full-splice_match	COX15	ENST00000016171.5	2356	9	-2	-1667	-2	-4	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	54	1286	30.0	-8	True	NA	NA
PB.1591.2	chr10	-	5066	9	full-splice_match	COX15	ENST00000016171.5	2356	9	-61	-2649	-61	978	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	113	1345	30.0	-67	False	ATTAAA	-20
PB.1591.1	chr10	-	6049	9	full-splice_match	COX15	ENST00000016171.5	2356	9	-62	-3631	-62	1960	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	3	NA	TRUE	NA	NA	NA	C	coding	410	1233	114	1346	45.0	-68	False	AATAAA	-31
PB.9084.3	chr4	+	4524	30	full-splice_match	TRAPPC11	ENST00000334690.10	4552	30	27	1	27	0	multi-exon	FALSE	canonical	1	70740	junction_1	49169.32407278017	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	176	3577	10.0	-3	True	AATAAA	-18
PB.1591.7	chr10	-	2815	9	full-splice_match	COX15	ENST00000370483.9	2788	9	-33	6	-33	-6	multi-exon	FALSE	canonical	1	15594	junction_1	102069.1035780876	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	85	1251	35.0	-39	True	NA	NA
PB.3082.1	chr13	+	1717	1	antisense	novelGene_UBL3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9084.6	chr4	+	5467	30	novel_not_in_catalog	TRAPPC11	novel	4552	30	NA	NA	-21	0	intron_retention	FALSE	canonical	1	15116	junction_1	55888.22921249981	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	1116	4517	5.0	5	True	AATAAA	-21
PB.1591.4	chr10	-	3998	9	novel_in_catalog	AL133353.2	novel	1971	13	NA	NA	-47	-60254	no_combination_of_known_junctions	FALSE	canonical	1	16507	junction_6	97655.53313816887	NA	2	NA	TRUE	NA	NA	NA	A	coding	115	348	913	1260	35.0	-65	False	NA	NA
PB.9386.19	chr5	-	4147	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-53	512	-1	402	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	189	806	25.0	0	True	AATAAA	-19
PB.3925.1	chr15	-	1891	5	novel_in_catalog	OAZ2	novel	1934	6	NA	NA	-22	0	intron_retention	FALSE	canonical	1	863533	junction_4	165805.25716390146	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-26	False	AATAAA	-15
PB.3925.2	chr15	-	1705	4	full-splice_match	OAZ2	ENST00000559753.1	785	4	-12	-908	2	-1	multi-exon	FALSE	canonical	1	10706	junction_3	536826.4637819811	NA	0	NA	TRUE	NA	NA	NA	C	coding	60	183	396	578	10.0	1	True	AATAAA	-14
PB.6536.9	chr2	+	1686	6	full-splice_match	PCYOX1	ENST00000433351.6	5345	6	0	3659	0	745	multi-exon	FALSE	canonical	1	296615	junction_1	70916.20229989759	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	29	1546	45.0	0	True	AATAAA	-23
PB.9368.30	chr5	+	3553	25	novel_in_catalog	PAM	novel	570	2	NA	NA	14	-5	combination_of_known_junctions	FALSE	canonical	1	170166	junction_23	239967.12523644368	NA	2	1	TRUE	NA	NA	NA	C	coding	905	2718	395	3112	40.0	23	True	AGTAAA	-21
PB.9386.14	chr5	-	5275	5	novel_not_in_catalog	STARD4	novel	4606	6	NA	NA	-13	-4	any annotated donor/acceptor	FALSE	canonical	1	28446	junction_1	141542.9387648409	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	468	False	AATAAA	-18
PB.9386.17	chr5	-	4346	5	novel_in_catalog	STARD4	novel	4606	6	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	1	6337	junction_1	147743.9470282962	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-17
PB.7791.4	chr22	+	1500	7	novel_in_catalog	APOBEC3G	novel	1834	8	NA	NA	96	-5	combination_of_known_junctions	FALSE	canonical	1	23775	junction_1	122793.4699368777	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	230	1183	10.0	-10000	False	AATAAA	-19
PB.7791.3	chr22	+	1511	8	full-splice_match	APOBEC3G	ENST00000407997.3	1834	8	322	1	243	-1	multi-exon	FALSE	canonical	1	15348	junction_1	118767.81643429936	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	36	1190	15.0	-9853	False	AATAAA	-23
PB.7791.2	chr22	+	1763	4	incomplete-splice_match	APOBEC3G	ENST00000407997.3	1834	8	51	5282	-11	-218	3prime_fragment	FALSE	canonical	1	15348	junction_1	174307.267808571	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	307	891	60.0	-4530	False	NA	NA
PB.7791.1	chr22	+	3469	7	novel_in_catalog	APOBEC3G	novel	1834	8	NA	NA	132	-1	intron_retention	FALSE	canonical	1	15348	junction_1	125699.4276964785	NA	2	NA	TRUE	NA	NA	NA	C	coding	317	954	2195	3148	15.0	-9964	False	AATAAA	-23
PB.9386.12	chr5	-	5293	4	full-splice_match	STARD4	ENST00000509887.5	1186	4	102	-4209	38	-4	multi-exon	FALSE	canonical	1	75844	junction_1	127178.0227249277	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	610	False	AATAAA	-18
PB.8492.2	chr3	+	2187	7	full-splice_match	MLF1	ENST00000355893.9	2203	7	21	-5	0	5	multi-exon	FALSE	canonical	1	127821	junction_1	58795.851879618174	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	118	924	35.0	-10	True	AATAAA	-25
PB.8492.3	chr3	+	2297	8	full-splice_match	MLF1	ENST00000484955.5	1247	8	19	-1069	1	6	multi-exon	FALSE	canonical	1	8805	junction_1	108038.19545675049	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	302	1033	35.0	-2	True	AATAAA	-26
PB.8492.1	chr3	+	2356	7	full-splice_match	MLF1	ENST00000355893.9	2203	7	20	-173	-1	173	multi-exon	FALSE	canonical	1	127821	junction_1	58795.851879618174	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	119	925	30.0	-11	True	AATAAA	-18
PB.8402.9	chr3	-	1436	10	full-splice_match	MRPL3	ENST00000511168.5	1377	10	-1	-58	-1	58	multi-exon	FALSE	canonical	1	20335	junction_9	384236.1170721288	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	360	1091	35.0	-14	True	ATTAAA	-18
PB.8402.8	chr3	-	1542	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	-1	165	-1	59	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	150	1196	35.0	0	True	ATTAAA	-19
PB.5238.1	chr17	+	2147	3	full-splice_match	ARMC7	ENST00000245543.5	2126	3	-21	0	-12	0	multi-exon	FALSE	canonical	1	93350	junction_2	24606.5	NA	5	NA	TRUE	NA	NA	NA	A	coding	198	597	324	920	15.0	-5	True	ATTAAA	-14
PB.8492.5	chr3	+	1148	7	full-splice_match	MLF1	ENST00000359117.9	2222	7	10	1064	0	0	multi-exon	FALSE	canonical	1	54902	junction_1	81423.22110361939	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	227	958	45.0	0	True	AATAAA	-13
PB.8402.5	chr3	-	2295	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	0	-589	0	589	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	4	NA	TRUE	NA	NA	NA	C	coding	348	1047	149	1195	35.0	1	True	TTTAAA	-15
PB.8402.4	chr3	-	2487	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	0	-781	0	781	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	1	NA	TRUE	NA	NA	NA	C	coding	348	1047	149	1195	75.0	1	True	ATTAAA	-31
PB.10441.10	chr7	-	1910	7	incomplete-splice_match	GSDME	ENST00000409775.7	1689	10	94	8285	15	-1	3prime_fragment	FALSE	canonical	1	65600	junction_6	96223.47636174287	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	74	1144	5.0	-1	True	TATAAA	-16
PB.8402.6	chr3	-	2174	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	0	-468	0	468	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	149	1195	10.0	1	True	NA	NA
PB.8402.1	chr3	-	3387	10	full-splice_match	MRPL3	ENST00000264995.7	1706	10	118	-1799	86	1799	multi-exon	FALSE	canonical	1	97701	junction_4	346659.13684963406	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	31	1077	20.0	0	True	NA	NA
PB.7217.1	chr20	-	3215	5	full-splice_match	ZNF337	ENST00000252979.5	3205	5	-11	1	-11	-1	multi-exon	FALSE	canonical	1	45756	junction_4	38524.85806187351	NA	23	NA	TRUE	NA	NA	NA	C	coding	751	2256	144	2399	20.0	0	True	NA	NA
PB.7217.2	chr20	-	3088	4	novel_in_catalog	ZNF337	novel	3613	4	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	509	junction_2	56033.98436861529	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	405	2273	20.0	-1	True	NA	NA
PB.9174.2	chr5	+	2438	15	incomplete-splice_match	RAI14	ENST00000265109.7	5092	18	16	8618	16	2176	3prime_fragment	FALSE	canonical	1	211350	junction_10	95115.15673701612	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2166	272	2437	40.0	-282	False	NA	NA
PB.7029.12	chr2	-	1956	14	novel_in_catalog	DNPEP	novel	2408	15	NA	NA	-4	0	intron_retention	FALSE	canonical	1	349876	junction_13	165098.06925721918	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	932	1861	15.0	-30	True	ATTAAA	-15
PB.8333.3	chr3	-	1924	14	full-splice_match	HCLS1	ENST00000314583.7	2000	14	5	71	-3	-70	multi-exon	FALSE	canonical	1	805658	junction_1	266778.30393768876	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	88	1548	40.0	-4	True	NA	NA
PB.8333.1	chr3	-	3830	13	novel_in_catalog	HCLS1	novel	2000	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	805658	junction_1	266926.4774087692	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	2567	3385	35.0	-5	True	AATAAA	-21
PB.8333.6	chr3	-	1911	13	full-splice_match	HCLS1	ENST00000428394.6	1560	13	-37	-314	-8	-1	multi-exon	FALSE	canonical	1	13100	junction_7	387974.0685336797	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	117	1466	35.0	0	True	AATAAA	-21
PB.8333.7	chr3	-	5037	1	novel_in_catalog	HCLS1	novel	2000	14	NA	NA	0	192	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.4534.9	chr16	-	2958	1	novel_in_catalog	CMTR2	novel	4869	3	NA	NA	-3	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	111	336	1	336	90.0	-16	True	NA	NA
PB.4534.8	chr16	-	3910	2	full-splice_match	CMTR2	ENST00000568910.1	632	2	3	-3281	3	-69	multi-exon	TRUE	canonical	1	5023	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	359	2671	20.0	-23	True	AATAAA	-11
PB.4534.6	chr16	-	6864	2	full-splice_match	CMTR2	ENST00000564690.1	2772	2	4	-4096	2	-64	multi-exon	FALSE	canonical	1	85476	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	770	2313	3308	5620	10.0	-24	True	AATAAA	-16
PB.4534.5	chr16	-	3682	3	full-splice_match	CMTR2	ENST00000563876.1	587	3	-16	-3079	-16	-63	multi-exon	FALSE	canonical	1	4165	junction_2	48118.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	125	2437	10.0	6269	False	AATAAA	-17
PB.4534.4	chr16	-	3933	2	full-splice_match	CMTR2	ENST00000565850.1	695	2	-15	-3223	0	-1	multi-exon	FALSE	canonical	1	3590	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	314	2626	10.0	-28	True	AATAAA	-16
PB.4534.3	chr16	-	3735	3	full-splice_match	CMTR2	ENST00000434935.6	4104	3	300	69	175	-69	multi-exon	FALSE	canonical	1	85476	junction_2	7463.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	770	2313	184	2496	20.0	6761	False	AATAAA	-11
PB.4534.2	chr16	-	3981	3	novel_in_catalog	CMTR2	novel	4869	3	NA	NA	0	-61	no_combination_of_known_junctions	FALSE	canonical	1	22784	junction_2	38809.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	422	2734	15.0	-26	True	AATAAA	-19
PB.4534.1	chr16	-	4877	3	full-splice_match	CMTR2	ENST00000434935.6	4104	3	138	-911	13	0	multi-exon	FALSE	canonical	1	85476	junction_2	7463.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	346	2658	15.0	0	True	ATTAAA	-18
PB.6285.8	chr2	+	1498	7	full-splice_match	ACP1	ENST00000453390.5	577	7	-17	-904	12	-4	multi-exon	FALSE	canonical	1	129469	junction_3	583440.5266771698	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	1	True	AATAAA	-32
PB.8351.1	chr3	+	2253	16	incomplete-splice_match	PDIA5	ENST00000316218.11	1799	17	-30	0	-22	0	intron_retention	FALSE	canonical	1	222493	junction_1	63220.7133319101	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	126	1670	10.0	-116	False	AATAAA	-14
PB.8934.2	chr4	+	1250	7	full-splice_match	GAR1	ENST00000226796.6	1224	7	-28	2	15	-2	multi-exon	FALSE	canonical	1	142875	junction_5	103699.04463036291	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	293	946	25.0	0	True	AATAAA	-16
PB.8934.1	chr4	+	2510	6	novel_in_catalog	GAR1	novel	1011	7	NA	NA	-29	-3	intron_retention	FALSE	canonical	1	21721	junction_1	151847.964297978	NA	3	NA	TRUE	NA	NA	NA	C	coding	198	597	78	674	25.0	0	True	AATAAA	-15
PB.6285.2	chr2	+	3270	5	novel_in_catalog	ACP1	novel	559	2	NA	NA	1	-12	intron_retention	FALSE	canonical	1	477824	junction_3	543248.920480002	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	49	345	35.0	-30	True	AATAAA	-24
PB.6285.3	chr2	+	1484	6	full-splice_match	ACP1	ENST00000272065.9	1549	6	62	3	-2	-3	multi-exon	FALSE	canonical	1	443897	junction_4	546239.9208848069	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	32	508	15.0	-13	True	AATAAA	-33
PB.1099.4	chr1	+	5038	9	novel_not_in_catalog	SYT14	novel	2997	9	NA	NA	31	0	any annotated donor/acceptor	FALSE	canonical	1	150	junction_3	8388.941521990424	NA	2	NA	TRUE	NA	NA	NA	C	coding	581	1746	49	1794	75.0	0	True	AATAAA	-14
PB.6285.1	chr2	+	4380	6	novel_in_catalog	ACP1	novel	559	2	NA	NA	0	-4	intron_retention	FALSE	canonical	1	129469	junction_3	618560.0027103595	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-32
PB.6285.6	chr2	+	6387	3	full-splice_match	ACP1	ENST00000407983.7	703	3	39	-5723	3	-3	multi-exon	FALSE	canonical	1	1450634	junction_2	148557.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	27	365	15.0	-8	True	AATAAA	-33
PB.6285.7	chr2	+	6238	4	novel_in_catalog	ACP1	novel	1552	6	NA	NA	11	-3	intron_retention	FALSE	canonical	1	595028	junction_3	488660.82924003183	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	19	357	15.0	0	True	AATAAA	-33
PB.6285.4	chr2	+	4474	5	novel_in_catalog	ACP1	novel	1552	6	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	443897	junction_3	552578.8777708573	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	32	370	10.0	-13	True	AATAAA	-34
PB.6285.5	chr2	+	2275	3	full-splice_match	ACP1	ENST00000407983.7	703	3	34	-1606	-2	1008	multi-exon	FALSE	canonical	1	1450634	junction_2	148557.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	32	370	80.0	-13	True	NA	NA
PB.7207.3	chr20	-	3911	11	novel_not_in_catalog	NAPB	novel	3824	10	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	4128	junction_8	106237.28533692867	NA	4	NA	TRUE	NA	NA	NA	C	coding	185	558	505	1062	35.0	-30	True	AATAAA	-14
PB.3806.9	chr15	-	4351	7	incomplete-splice_match	ZNF106	ENST00000263805.8	10460	19	0	28920	0	-2	3prime_fragment	FALSE	canonical	1	236103	junction_6	60615.1386637218	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	328	4029	35.0	-1	True	AATAAA	-32
PB.7207.1	chr20	-	2759	14	novel_not_in_catalog	NAPB	novel	3824	10	NA	NA	11	3252	any annotated donor/acceptor	TRUE	canonical	1	1103	junction_4	125324.1092487558	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	295	909	35.0	-1	True	AATAAA	-18
PB.7207.7	chr20	-	5862	9	novel_in_catalog	NAPB	novel	3824	10	NA	NA	-6	-6	intron_retention	FALSE	canonical	1	148073	junction_7	59871.220819016	NA	2	NA	TRUE	NA	NA	NA	C	coding	106	321	2694	3014	35.0	-34	True	AATAAA	-13
PB.7207.6	chr20	-	3338	11	novel_not_in_catalog	NAPB	novel	3824	10	NA	NA	11	-5	any annotated donor/acceptor	FALSE	canonical	1	1890	junction_1	107932.59129734633	NA	10	1	TRUE	NA	NA	NA	C	coding	204	615	295	909	35.0	-1	True	AATAAA	-14
PB.7207.5	chr20	-	3668	9	novel_in_catalog	NAPB	novel	3824	10	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	21867	junction_7	91285.31435687986	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	499	819	35.0	-28	True	AATAAA	-14
PB.4651.23	chr17	-	7202	44	novel_not_in_catalog	PRPF8	novel	380	2	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	20657	junction_11	528987.1834897868	NA	0	NA	TRUE	NA	NA	NA	C	coding	1761	5286	103	5388	10.0	-34	True	AATAAA	-28
PB.3806.2	chr15	-	10198	19	novel_in_catalog	ZNF106	novel	10460	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	80814	junction_12	97735.00342056209	NA	12	1	TRUE	NA	NA	NA	C	coding	1796	5391	328	5718	15.0	-1	True	AATAAA	-17
PB.7207.8	chr20	-	3103	9	novel_in_catalog	NAPB	novel	3824	10	NA	NA	-2	-572	combination_of_known_junctions	FALSE	canonical	1	21867	junction_7	91285.31435687986	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	501	821	25.0	-30	True	ATTAAA	-23
PB.3806.4	chr15	-	8144	19	full-splice_match	ZNF106	ENST00000263805.8	10460	19	0	2316	0	-16	multi-exon	FALSE	canonical	1	236103	junction_18	74679.89094294394	NA	2	NA	TRUE	NA	NA	NA	C	coding	1883	5652	328	5979	85.0	-1	True	NA	NA
PB.6920.15	chr2	-	4891	27	incomplete-splice_match	ANKRD44	ENST00000282272.14	5147	28	-99	4288	15	2750	3prime_fragment	FALSE	canonical	1	94747	junction_1	35599.78830990515	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	162	3167	90.0	60	False	NA	NA
PB.3806.6	chr15	-	2132	1	incomplete-splice_match	ZNF106	ENST00000263805.8	10460	19	40262	2316	6976	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7007.4	chr2	-	5057	26	full-splice_match	USP37	ENST00000454775.5	5019	26	-48	10	-12	-10	multi-exon	FALSE	canonical	1	18364	junction_23	24703.237793163877	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	466	3405	85.0	-37	True	NA	NA
PB.12284.1	chrX	-	2459	5	novel_not_in_catalog	CT45A5	novel	1161	5	NA	NA	-192	1278	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	189	570	106	675	25.0	NA	False	NA	NA
PB.240.4	chr1	-	4057	22	novel_in_catalog	PUM1	novel	4631	18	NA	NA	9	73	combination_of_known_junctions	FALSE	canonical	1	162341	junction_10	137205.39238239604	NA	2	1	TRUE	NA	NA	NA	C	coding	1161	3486	114	3599	85.0	-1	True	NA	NA
PB.11382.1	chr8	-	2849	19	novel_not_in_catalog	SCRIB	novel	5218	37	NA	NA	2212	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	134936.6030583128	NA	1	NA	TRUE	NA	NA	NA	A	coding	822	2469	138	2606	5.0	9321	False	AATAAA	-21
PB.7007.7	chr2	-	4941	25	novel_in_catalog	USP37	novel	8032	26	NA	NA	-2	-10	combination_of_known_junctions	FALSE	canonical	1	10538	junction_8	26213.842447443203	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	416	3289	85.0	-27	True	NA	NA
PB.10302.1	chr6	+	6800	27	full-splice_match	SYNJ2	ENST00000355585.8	7378	27	-62	640	-62	-640	multi-exon	TRUE	canonical	1	87269	junction_23	32550.92838321923	NA	3	NA	TRUE	NA	NA	NA	C	coding	1496	4491	138	4628	85.0	-121	False	NA	NA
PB.1081.10	chr1	-	1747	7	full-splice_match	FCMR	ENST00000628511.2	1055	7	-74	-618	0	-15	multi-exon	FALSE	canonical	1	4393	junction_3	146572.34137903826	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	88	1008	45.0	-1	True	GATAAA	-18
PB.7007.6	chr2	-	4960	26	full-splice_match	USP37	ENST00000418019.5	3353	26	-70	-1537	0	-10	multi-exon	FALSE	canonical	1	10947	junction_24	25242.99599353452	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	369	3308	85.0	-25	True	NA	NA
PB.10302.2	chr6	+	2746	12	incomplete-splice_match	SYNJ2	ENST00000640338.1	3959	27	-123	26561	-56	3661	3prime_fragment	FALSE	canonical	1	96808	junction_4	29339.094155823856	NA	2	NA	TRUE	NA	NA	NA	C	coding	588	1767	132	1898	10.0	-43	True	AATAAA	-17
PB.12305.1	chrX	+	1892	5	full-splice_match	MAGEA11	ENST00000355220.5	1864	5	-10	-18	-10	0	multi-exon	FALSE	canonical	1	5373	junction_1	453.3146672014926	NA	0	NA	TRUE	NA	NA	NA	A	coding	429	1290	113	1402	20.0	8	True	AATAAA	-15
PB.10302.4	chr6	+	6075	27	full-splice_match	SYNJ2	ENST00000355585.8	7378	27	-30	1333	-30	-11	multi-exon	FALSE	canonical	1	87269	junction_23	32550.92838321923	NA	0	NA	TRUE	NA	NA	NA	C	coding	1496	4491	106	4596	65.0	-17	True	NA	NA
PB.10302.5	chr6	+	5369	27	full-splice_match	SYNJ2	ENST00000355585.8	7378	27	-13	2022	-13	691	multi-exon	FALSE	canonical	1	87269	junction_23	32550.92838321923	NA	0	NA	TRUE	NA	NA	NA	C	coding	1496	4491	89	4579	15.0	0	True	ATTAAA	-14
PB.3712.4	chr14	-	1763	6	novel_not_in_catalog	IGHGP	novel	1178	6	NA	NA	-342555	-3486	intron_retention	TRUE	non_canonical	0	0	junction_1	5387081.766824684	NA	5	1	TRUE	NA	NA	NA	B	coding	293	882	481	1362	15.0	-6816	False	AATAAA	-21
PB.3712.5	chr14	-	1613	7	novel_not_in_catalog	IGHGP	novel	1178	6	NA	NA	-392840	-3486	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	176998.59777881482	NA	6	1	TRUE	NA	NA	NA	B	coding	467	1404	80	1483	15.0	-1	True	AATAAA	-21
PB.3712.7	chr14	-	1873	9	novel_not_in_catalog	IGHA1	novel	1310	5	NA	NA	-626949	38	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	3462822.058795425	NA	7	1	TRUE	NA	NA	NA	B	coding	546	1641	82	1722	35.0	NA	False	AATAAA	-21
PB.8478.2	chr3	+	2633	13	novel_in_catalog	ARHGEF26	novel	5254	15	NA	NA	15	0	no_combination_of_known_junctions	FALSE	canonical	1	52	junction_1	24920.800861456857	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	332	1558	100.0	25	True	NA	NA
PB.3712.1	chr14	-	1619	8	novel_not_in_catalog	IGHGP	novel	1178	6	NA	NA	-515546	-3484	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	558088.22317696	NA	9	1	TRUE	NA	NA	NA	B	coding	194	585	903	1487	15.0	-1	True	AATAAA	-23
PB.3712.2	chr14	-	1558	7	novel_not_in_catalog	IGHGP	novel	1178	6	NA	NA	-392840	-3486	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	176998.59777881482	NA	6	1	TRUE	NA	NA	NA	B	coding	360	1083	80	1162	15.0	-1	True	AATAAA	-21
PB.3712.3	chr14	-	994	4	novel_in_catalog	IGHGP	novel	1178	6	NA	NA	-73105	-3486	intron_retention	FALSE	canonical	1	740	junction_1	6168743.271844724	NA	2	NA	TRUE	NA	NA	NA	B	coding	194	585	280	864	15.0	96	False	AATAAA	-21
PB.4740.1	chr17	+	2302	6	full-splice_match	TNFSF13	ENST00000338784.8	1971	6	-339	8	-34	0	multi-exon	TRUE	canonical	1	247411	junction_1	48316.06220130114	NA	0	NA	TRUE	NA	NA	NA	A	coding	233	702	834	1535	10.0	-3732	False	AATAAA	-15
PB.4740.2	chr17	+	2202	5	novel_in_catalog	TNFSF12-TNFSF13	novel	1816	11	NA	NA	9179	-2	intron_retention	FALSE	canonical	1	10335	junction_1	148465.4390102289	NA	0	NA	TRUE	NA	NA	NA	B	coding	106	321	763	1083	10.0	-4	True	AATAAA	-14
PB.4740.3	chr17	+	1586	7	novel_in_catalog	TNFSF12-TNFSF13	novel	1816	11	NA	NA	9183	-1	intron_retention	FALSE	canonical	1	16527	junction_1	119283.07035460741	NA	1	NA	TRUE	NA	NA	NA	B	coding	233	702	118	819	10.0	0	True	AATAAA	-15
PB.3712.8	chr14	-	1853	9	novel_not_in_catalog	IGHA1	novel	1310	5	NA	NA	-626947	38	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	3451271.2709328844	NA	8	1	TRUE	NA	NA	NA	B	coding	540	1623	80	1702	35.0	NA	False	AATAAA	-21
PB.3712.9	chr14	-	1615	7	novel_not_in_catalog	IGHA1	novel	1310	5	NA	NA	-626947	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	3817999.6819620384	NA	8	1	TRUE	NA	NA	NA	B	coding	495	1488	80	1567	15.0	NA	False	AATAAA	-19
PB.11405.3	chr8	+	1892	4	novel_in_catalog	MFSD3	novel	1548	5	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	322033	junction_3	55396.4659342092	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	264	953	20.0	1	True	AATAAA	-21
PB.7847.5	chr22	-	2490	14	novel_not_in_catalog	TTLL12	novel	3385	14	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	245993.58233010396	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	317	1819	5.0	10	True	AATAAA	-15
PB.11405.1	chr8	+	1568	5	full-splice_match	MFSD3	ENST00000301327.4	1548	5	-5	-15	-5	15	multi-exon	FALSE	canonical	1	276312	junction_1	63043.71625507177	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	266	1504	20.0	-1	True	AATAAA	-39
PB.7551.9	chr21	+	4504	19	novel_in_catalog	PFKL	novel	2912	22	NA	NA	1	-6	intron_retention	FALSE	canonical	1	604271	junction_1	349910.5822815953	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	55	1185	35.0	-21	True	AATAAA	-34
PB.7551.8	chr21	+	2722	23	novel_not_in_catalog	PFKL	novel	2912	22	NA	NA	0	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	457179.14881814626	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	56	2398	30.0	-22	True	AATAAA	-36
PB.7551.5	chr21	+	2938	22	novel_not_in_catalog	PFKL	novel	2912	22	NA	NA	-9	-4	any annotated donor/acceptor	FALSE	canonical	1	1930	junction_3	464684.2507258054	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	65	2428	30.0	-31	True	AATAAA	-36
PB.7551.4	chr21	+	2867	22	full-splice_match	PFKL	ENST00000349048.8	2912	22	-1	46	-1	-46	multi-exon	FALSE	canonical	1	604271	junction_1	356412.7977344309	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	57	2399	45.0	-23	True	NA	NA
PB.7551.7	chr21	+	3392	25	full-splice_match	PFKL	ENST00000397961.6	3390	25	-6	4	-6	-4	multi-exon	FALSE	canonical	1	8298	junction_2	610972.8223885385	NA	0	NA	TRUE	NA	NA	NA	C	coding	827	2484	399	2882	30.0	-28	True	AATAAA	-36
PB.7551.6	chr21	+	2984	22	novel_in_catalog	PFKL	novel	2912	22	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	1	3283	junction_16	447411.8345869678	NA	9	1	TRUE	NA	NA	NA	C	coding	605	1818	64	1881	35.0	-30	True	AATAAA	-33
PB.7551.1	chr21	+	3603	21	novel_in_catalog	PFKL	novel	2912	22	NA	NA	-27	-4	intron_retention	FALSE	canonical	1	604271	junction_1	364624.89577513427	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	83	1213	30.0	-5942	False	AATAAA	-36
PB.7551.3	chr21	+	4282	20	novel_in_catalog	PFKL	novel	2912	22	NA	NA	-17	-11	intron_retention	FALSE	canonical	1	604271	junction_1	368100.99246043136	NA	8	NA	TRUE	NA	NA	NA	C	coding	376	1131	73	1203	25.0	-5932	False	AATAAA	-29
PB.7551.2	chr21	+	3473	25	novel_not_in_catalog	PFKL	novel	2912	22	NA	NA	-21	-7	any annotated donor/acceptor	FALSE	canonical	1	13581	junction_1	610284.8375029697	NA	0	NA	TRUE	NA	NA	NA	C	coding	827	2484	483	2966	35.0	-5936	False	AATAAA	-33
PB.11377.10	chr8	-	2677	6	novel_in_catalog	NAPRT	novel	454	2	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	385861	junction_5	83106.55755739134	NA	2	NA	TRUE	NA	NA	NA	C	coding	113	342	1167	1508	10.0	-12	True	GGGGCT	-35
PB.1099.3	chr1	+	3270	8	full-splice_match	SYT14	ENST00000472886.5	2966	8	-74	-230	3	230	multi-exon	FALSE	canonical	1	2311	junction_2	7254.810496969496	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	89	1756	40.0	-56	False	ATTAAA	-23
PB.7008.4	chr2	+	1647	8	full-splice_match	CNOT9	ENST00000273064.10	4079	8	237	2195	2	-11	multi-exon	FALSE	canonical	1	287726	junction_1	136592.3742249477	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	139	1038	20.0	-22	True	AATAAA	-18
PB.4513.14	chr16	-	2652	4	novel_not_in_catalog	CHTF8	novel	2903	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	560	junction_1	155681.22548407118	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	1033	1809	5.0	-3	True	AATAAA	-14
PB.240.8	chr1	-	3390	18	novel_in_catalog	PUM1	novel	4631	18	NA	NA	0	73	combination_of_known_junctions	FALSE	canonical	1	8262	junction_15	170203.56398364154	NA	0	NA	TRUE	NA	NA	NA	C	coding	946	2841	92	2932	85.0	21	True	NA	NA
PB.1247.3	chr1	-	2025	4	full-splice_match	ZNF670	ENST00000366503.2	1994	4	-27	-4	-27	4	multi-exon	FALSE	canonical	1	43200	junction_3	5823.540980842803	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	187	1356	25.0	1	True	AATAAA	-24
PB.6211.2	chr19	+	3145	13	full-splice_match	NLRP2	ENST00000448584.6	3573	13	91	337	28	-275	multi-exon	FALSE	canonical	1	73566	junction_1	47885.62697633463	NA	1	NA	TRUE	NA	NA	NA	C	coding	1031	3093	52	3144	75.0	-8711	False	NA	NA
PB.4513.10	chr16	-	2773	5	novel_not_in_catalog	CHTF8	novel	2903	4	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	560	junction_1	205248.93567126602	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	127	492	5.0	-5	True	AATAAA	-15
PB.4513.11	chr16	-	2742	4	novel_not_in_catalog	CHTF8	novel	2903	4	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	155893.02618355534	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	365	1804	5.0	1	True	AATAAA	-15
PB.4513.13	chr16	-	2801	4	novel_not_in_catalog	CHTF8	novel	2903	4	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	169682.88793380302	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	384	1958	5.0	1	True	AATAAA	-14
PB.960.2	chr1	+	1774	5	novel_in_catalog	TOR3A	novel	2724	6	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	1	48484	junction_2	238813.86667065107	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	73	513	25.0	-13	True	ATTAAA	-16
PB.674.9	chr1	+	1860	15	full-splice_match	POLR3C	ENST00000334163.3	1851	15	-10	1	-10	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	172	1776	35.0	0	True	AATAAA	-32
PB.2623.24	chr12	+	2142	2	incomplete-splice_match	EIF4B	ENST00000549592.1	1901	3	1902	-1857	1902	0	5prime_fragment	FALSE	canonical	1	14516	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9561	False	AATAAA	-19
PB.8405.10	chr3	+	4190	13	novel_not_in_catalog	UBA5	novel	2850	12	NA	NA	-2	1708	intron_retention	FALSE	canonical	0	0	junction_12	176761.34179735117	NA	4	1	TRUE	NA	NA	NA	C	coding	404	1215	198	1412	25.0	-30	True	NA	NA
PB.8405.11	chr3	+	3917	13	novel_not_in_catalog	UBA5	novel	2850	12	NA	NA	-2	1693	intron_retention	FALSE	non_canonical	0	0	junction_12	176761.34179735117	NA	1	1	TRUE	NA	NA	NA	C	coding	404	1215	198	1412	35.0	-30	True	ACTAAA	-34
PB.8405.12	chr3	+	2222	13	novel_in_catalog	UBA5	novel	2850	12	NA	NA	3	2	intron_retention	FALSE	canonical	1	2976	junction_1	204336.9412858977	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	511	1557	35.0	-25	True	AATAAA	-26
PB.8405.13	chr3	+	2998	12	full-splice_match	UBA5	ENST00000494238.6	2997	12	-6	5	-4	-5	multi-exon	FALSE	canonical	1	11606	junction_1	179890.49532276875	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	701	1747	50.0	-15	True	AATAAA	-19
PB.8405.14	chr3	+	2053	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	896	756	0	-1	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	177	1391	40.0	-9	True	AATAAA	-23
PB.6807.2	chr2	+	1278	12	full-splice_match	PSMD14	ENST00000409682.7	1954	12	379	297	-44	-295	multi-exon	FALSE	canonical	1	719768	junction_1	280003.30558187497	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	326	1258	25.0	-58	True	AATAAA	-20
PB.674.2	chr1	+	2844	14	incomplete-splice_match	POLR3C	ENST00000334163.3	1851	15	-40	314	13	-302	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	202	1728	30.0	-30	True	NA	NA
PB.7012.1	chr2	-	1504	10	full-splice_match	RNF25	ENST00000295704.6	1914	10	409	1	-18	-1	multi-exon	FALSE	canonical	1	160553	junction_9	101986.34785192007	NA	0	NA	TRUE	NA	NA	NA	A	coding	459	1380	33	1412	20.0	-24	True	AATAAA	-42
PB.6601.10	chr2	-	2276	7	novel_in_catalog	ST3GAL5	novel	4431	7	NA	NA	1	19	intron_retention	FALSE	canonical	1	7003	junction_6	73759.28198858922	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	363	1376	55.0	-11	True	TATAAA	-11
PB.9174.7	chr5	+	5001	18	novel_in_catalog	RAI14	novel	5092	18	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	1	21115	junction_3	122857.55404126953	NA	1	NA	TRUE	NA	NA	NA	C	coding	966	2901	255	3155	10.0	0	True	AATAAA	-16
PB.7956.1	chr3	-	4148	5	novel_in_catalog	MRPS25	novel	823	2	NA	NA	2	209	combination_of_known_junctions	FALSE	canonical	1	71460	junction_1	327717.25628085254	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	122	643	30.0	-64	True	AATAAA	-14
PB.9738.20	chr6	-	2100	6	incomplete-splice_match	NEDD9	ENST00000379446.9	4536	7	12	4970	12	2590	3prime_fragment	FALSE	canonical	1	215814	junction_5	65791.00845860322	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	156	2099	65.0	-3	True	NA	NA
PB.8224.4	chr3	+	2011	10	novel_in_catalog	MITF	novel	4814	10	NA	NA	-27726	0	combination_of_known_junctions	FALSE	canonical	1	3087	junction_1	41674.331556326935	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	188	1612	90.0	-17	True	NA	NA
PB.10842.3	chr7	-	2541	11	full-splice_match	CEP41	ENST00000223208.9	6513	11	210	3762	0	-25	multi-exon	FALSE	canonical	1	83400	junction_8	27125.170572735577	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	62	1183	100.0	-12	True	NA	NA
PB.10842.2	chr7	-	2464	10	full-splice_match	CEP41	ENST00000343969.9	1087	10	-67	-1310	-5	79	multi-exon	FALSE	canonical	1	22277	junction_1	40121.4289444333	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	97	1002	50.0	79	False	AATAAA	-30
PB.10842.1	chr7	-	2686	11	full-splice_match	CEP41	ENST00000223208.9	6513	11	193	3634	12	103	multi-exon	FALSE	canonical	1	83400	junction_8	27125.170572735577	NA	3	NA	TRUE	NA	NA	NA	C	coding	373	1122	79	1200	15.0	-29	True	AATAAA	-45
PB.10842.6	chr7	-	2644	12	novel_in_catalog	CEP41	novel	6222	9	NA	NA	5	-28	combination_of_known_junctions	FALSE	canonical	1	1859	junction_9	49976.773518197995	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	273	1289	90.0	-4	True	NA	NA
PB.10842.5	chr7	-	2235	10	novel_in_catalog	CEP41	novel	6222	9	NA	NA	10	-26	combination_of_known_junctions	FALSE	canonical	1	3072	junction_4	49687.94425458668	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	49	426	100.0	1	True	NA	NA
PB.10842.4	chr7	-	2231	10	full-splice_match	CEP41	ENST00000343969.9	1087	10	-33	-1111	1	-120	multi-exon	FALSE	canonical	1	22277	junction_1	40121.4289444333	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	63	968	35.0	-13	True	AATAAA	-20
PB.247.1	chr1	+	1758	9	full-splice_match	KHDRBS1	ENST00000327300.11	2757	9	35	964	35	294	multi-exon	FALSE	canonical	1	1330178	junction_1	226516.00656131207	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	133	1464	65.0	-6	True	TATAAA	-23
PB.11352.1	chr8	-	2731	15	incomplete-splice_match	COL22A1	ENST00000303045.10	6346	65	-90	189682	-77	-10	3prime_fragment	FALSE	canonical	1	10387	junction_6	4439.628224920438	NA	0	NA	TRUE	NA	NA	NA	A	coding	615	1848	538	2385	45.0	-3	True	NA	NA
PB.1193.1	chr1	-	3382	24	novel_in_catalog	TTC13	novel	3253	23	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	11226	junction_16	52323.26651035655	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	32	1069	20.0	-15	True	AATAAA	-40
PB.6425.2	chr2	-	4294	13	full-splice_match	ATL2	ENST00000419554.6	2335	13	-13	-1946	-1	925	multi-exon	FALSE	canonical	1	10936	junction_1	122638.35046667702	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	27	1766	40.0	-15	True	ATTAAA	-23
PB.8396.7	chr3	-	5116	21	novel_not_in_catalog	PIK3R4	novel	5015	20	NA	NA	25	-1	any annotated donor/acceptor	FALSE	canonical	1	1488	junction_17	76816.08918766628	NA	2	1	TRUE	NA	NA	NA	C	coding	852	2559	2179	4737	30.0	18	True	ATTAAA	-26
PB.2992.1	chr12	+	1831	2	incomplete-splice_match	ARL6IP4	ENST00000539576.5	1684	4	14	-3	0	0	intron_retention	FALSE	canonical	1	751844	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	273	822	3	824	0.0	15	True	ATTAAA	-17
PB.2992.3	chr12	+	1026	6	novel_not_in_catalog	AC026362.1	novel	5618	7	NA	NA	5403	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1595903.769627555	NA	7	1	TRUE	NA	NA	NA	A	coding	69	210	583	792	0.0	42	True	ATTAAA	-18
PB.2992.2	chr12	+	2199	1	novel_in_catalog	ARL6IP4	novel	1644	6	NA	NA	-5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	0.0	30	True	ATTAAA	-17
PB.2883.2	chr12	+	1910	6	full-splice_match	UNG	ENST00000336865.6	2130	6	236	-16	203	-1	multi-exon	FALSE	canonical	1	420082	junction_2	102609.41569934018	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	289	888	10.0	-169	False	AATAAA	-15
PB.1144.8	chr1	+	3351	21	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	167	-173	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	692847.5779768212	NA	6	1	TRUE	NA	NA	NA	B	coding	503	1512	143	1654	15.0	-40	True	AATAAA	-27
PB.2883.1	chr12	+	2068	7	full-splice_match	UNG	ENST00000242576.6	2071	7	2	1	2	-1	multi-exon	FALSE	canonical	1	242568	junction_1	155197.56842749036	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	105	1046	10.0	-21	True	AATAAA	-15
PB.11071.5	chr8	+	1519	4	full-splice_match	LEPROTL1	ENST00000321250.12	3173	4	22	1632	0	803	multi-exon	FALSE	canonical	1	481401	junction_1	57114.59229965277	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	94	489	30.0	0	True	CATAAA	-27
PB.6425.6	chr2	-	3360	13	full-splice_match	ATL2	ENST00000419554.6	2335	13	-13	-1012	-1	-9	multi-exon	FALSE	canonical	1	10936	junction_1	122638.35046667702	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	27	1766	40.0	-15	True	ATTAAA	-17
PB.1144.3	chr1	+	3163	19	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	61	-174	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	521536.1256951802	NA	2	1	TRUE	NA	NA	NA	B	coding	445	1338	249	1586	15.0	-4413	False	AATAAA	-26
PB.1144.2	chr1	+	3760	19	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	176	-173	intron_retention	FALSE	non_canonical	0	0	junction_10	519448.7356187813	NA	3	1	TRUE	NA	NA	NA	B	coding	503	1512	134	1645	15.0	-31	True	AATAAA	-27
PB.1144.5	chr1	+	3493	20	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	79	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	508283.1335550249	NA	3	1	TRUE	NA	NA	NA	B	coding	503	1512	231	1742	45.0	-4395	False	ATTAAA	-30
PB.1144.4	chr1	+	2557	20	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	175	-840	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	508283.1335550249	NA	3	1	TRUE	NA	NA	NA	B	coding	503	1512	135	1646	55.0	-32	True	ATTAAA	-5
PB.8366.2	chr3	-	2075	10	novel_in_catalog	SLC41A3	novel	2169	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	50372	junction_8	154759.52014945282	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	64	1419	25.0	-5	True	AATAAA	-18
PB.6425.7	chr2	-	2987	14	novel_in_catalog	ATL2	novel	2868	13	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	1	2953	junction_13	150482.89627697004	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	20	1882	40.0	-8	True	ATTAAA	-17
PB.6563.1	chr2	-	2168	2	full-splice_match	C2orf81	ENST00000640331.1	883	2	-56	-1229	-56	-1	multi-exon	FALSE	canonical	1	3862	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	520	1563	456	2018	15.0	-37	True	AATAAA	-22
PB.6425.4	chr2	-	3685	13	full-splice_match	ATL2	ENST00000378954.8	2868	13	-28	-789	-5	789	multi-exon	FALSE	canonical	1	233787	junction_12	66664.61564485608	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	31	1782	30.0	-19	True	ATTAAA	-30
PB.6425.5	chr2	-	2886	13	full-splice_match	ATL2	ENST00000378954.8	2868	13	-28	10	-5	-10	multi-exon	FALSE	canonical	1	233787	junction_12	66664.61564485608	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	31	1782	40.0	-19	True	ATTAAA	-16
PB.9588.1	chr5	-	2934	7	full-splice_match	HAVCR2	ENST00000307851.8	2907	7	-28	1	-28	-1	multi-exon	FALSE	canonical	1	44162	junction_6	8566.244621575237	NA	0	NA	TRUE	NA	NA	NA	A	coding	301	906	760	1665	0.0	3394	False	NA	NA
PB.182.2	chr1	-	4213	2	novel_not_in_catalog	RSRP1	novel	3034	6	NA	NA	-25	2761	any annotated donor/acceptor	FALSE	canonical	1	3221	junction_1	0.0	NA	17	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.11071.2	chr8	+	2706	4	full-splice_match	LEPROTL1	ENST00000321250.12	3173	4	8	459	-4	65	multi-exon	FALSE	canonical	1	481401	junction_1	57114.59229965277	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	108	503	10.0	-14	True	AATAAA	-15
PB.8045.5	chr3	+	3278	5	incomplete-splice_match	NKTR	ENST00000617821.4	7319	18	38888	0	-4078	0	5prime_fragment	FALSE	canonical	1	247034	junction_3	148001.32285726367	NA	3	NA	TRUE	NA	NA	NA	B	coding	175	528	27	554	20.0	-7742	False	ATTAAA	-16
PB.6432.1	chr2	-	4180	34	full-splice_match	MAP4K3	ENST00000263881.7	4362	34	178	4	13	-4	multi-exon	TRUE	canonical	1	96658	junction_20	44984.0928327482	NA	1	NA	TRUE	NA	NA	NA	A	coding	894	2685	148	2832	15.0	32	True	AATAAA	-26
PB.8045.2	chr3	+	3136	12	novel_in_catalog	NKTR	novel	7343	17	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	52212	junction_5	165058.11815832308	NA	0	NA	TRUE	NA	NA	NA	B	coding	320	960	2175	3134	65.0	-11	True	CATAAA	-9
PB.8045.3	chr3	+	2342	1	novel_in_catalog	NKTR	novel	7343	17	NA	NA	2	-31	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	-5	True	NA	NA
PB.2559.8	chr12	+	3850	20	full-splice_match	ANO6	ENST00000320560.12	5975	20	-24	2149	11	-1580	multi-exon	FALSE	canonical	1	221195	junction_1	60830.98484359391	NA	6	NA	TRUE	NA	NA	NA	C	coding	910	2733	227	2959	45.0	1	True	ATTAAA	-19
PB.2559.9	chr12	+	2821	20	full-splice_match	ANO6	ENST00000320560.12	5975	20	-17	3171	-17	-2602	multi-exon	FALSE	canonical	1	221195	junction_1	60830.98484359391	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2601	220	2820	55.0	8	True	NA	NA
PB.2215.28	chr11	+	3476	5	full-splice_match	TYR	ENST00000263321.5	2485	5	423	-1414	-18	1414	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	80	1669	55.0	0	True	TTTAAA	-7
PB.2215.29	chr11	+	2852	3	incomplete-splice_match	TYR	ENST00000263321.5	2485	5	423	66200	-18	28948	3prime_fragment	FALSE	canonical	1	119093	junction_2	15782.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	80	1285	90.0	0	True	NA	NA
PB.6793.1	chr2	-	3221	14	novel_not_in_catalog	ACVR1	novel	3047	11	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	88	junction_11	101363.01989168502	NA	3	1	TRUE	NA	NA	NA	C	coding	504	1515	625	2139	35.0	1	True	AATAAA	-14
PB.2559.2	chr12	+	5999	20	novel_not_in_catalog	ANO6	novel	2780	18	NA	NA	1	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	100995.37919187592	NA	35	2	TRUE	NA	NA	NA	C	coding	809	2430	237	2666	40.0	-9	True	AATAAA	-9
PB.2559.3	chr12	+	2597	18	incomplete-splice_match	ANO6	ENST00000320560.12	5975	20	-31	11134	4	0	3prime_fragment	FALSE	canonical	1	221195	junction_1	64248.71608890457	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2364	234	2597	70.0	-6	True	NA	NA
PB.2215.26	chr11	+	3693	4	incomplete-splice_match	TYR	ENST00000263321.5	2485	5	468	8512	27	-8061	3prime_fragment	FALSE	canonical	1	90342	junction_3	24632.835091939105	NA	28	NA	TRUE	NA	NA	NA	C	coding	487	1464	35	1498	30.0	0	True	AATAAA	-18
PB.2215.27	chr11	+	3792	5	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-18	-8060	any annotated donor/acceptor	FALSE	canonical	1	656	junction_4	66578.38526269242	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	80	1306	35.0	0	True	AATAAA	-19
PB.2559.6	chr12	+	5888	19	novel_in_catalog	ANO6	novel	2780	18	NA	NA	8	-8	no_combination_of_known_junctions	FALSE	canonical	1	7548	junction_18	102231.69383874499	NA	10	NA	TRUE	NA	NA	NA	C	coding	812	2439	230	2668	40.0	-2	True	AATAAA	-12
PB.2559.7	chr12	+	3764	19	novel_not_in_catalog	ANO6	novel	2780	18	NA	NA	10	-11	any annotated donor/acceptor	FALSE	canonical	1	2542	junction_18	118892.16233125911	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	286	2712	40.0	0	True	AATAAA	-9
PB.2559.4	chr12	+	6065	21	full-splice_match	ANO6	ENST00000423947.7	5504	21	7	-568	7	-1	multi-exon	FALSE	canonical	1	39787	junction_2	110487.74177056926	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	231	3026	25.0	-3	True	AATAAA	-19
PB.2559.5	chr12	+	5914	19	novel_in_catalog	ANO6	novel	2780	18	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	1	61291	junction_1	87179.8070631668	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	288	2882	40.0	-2	True	AATAAA	-12
PB.971.2	chr1	+	2143	6	full-splice_match	MR1	ENST00000367580.5	7704	6	-15	5576	-15	-191	multi-exon	FALSE	canonical	1	61289	junction_3	63393.09501641326	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	21	1046	70.0	0	True	NA	NA
PB.971.1	chr1	+	1872	5	full-splice_match	MR1	ENST00000282990.10	2043	5	-20	191	11	-191	multi-exon	FALSE	canonical	1	133618	junction_3	37697.383135305296	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	26	775	70.0	-5	True	NA	NA
PB.8503.1	chr3	+	3727	1	full-splice_match	KRT8P12	ENST00000472924.1	1397	1	-2105	-225	300	225	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	117	354	2290	2643	85.0	604	False	AATAAA	-21
PB.8503.2	chr3	+	2459	2	novel_not_in_catalog	KRT8P12	novel	998	3	NA	NA	301	225	any annotated donor/acceptor	TRUE	canonical	1	296	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	117	354	1022	1375	85.0	605	False	AATAAA	-21
PB.11593.1	chr9	+	2663	5	novel_not_in_catalog	FXN	novel	7471	5	NA	NA	-17	-115	any annotated donor/acceptor	FALSE	canonical	1	51	junction_4	64744.86935850593	NA	5	1	TRUE	NA	NA	NA	C	coding	164	495	54	548	80.0	-39	True	NA	NA
PB.6408.1	chr2	+	3656	1	novel_in_catalog	LINC01320	novel	1314	7	NA	NA	4586	94276	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	NA	False	NA	NA
PB.3228.6	chr13	+	4422	7	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	-1	-6	no_combination_of_known_junctions	FALSE	canonical	1	6181	junction_4	146486.22448847842	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	842	1645	35.0	-38	False	AATAAA	-11
PB.3228.7	chr13	+	2494	7	full-splice_match	MBNL2	ENST00000343600.8	4596	7	-1	2103	-1	8	multi-exon	FALSE	canonical	1	150007	junction_6	114681.99598987725	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	842	1927	65.0	-38	False	NA	NA
PB.3228.4	chr13	+	4654	8	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	49482	junction_5	156592.66284920275	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	848	1987	20.0	-44	False	AATAAA	-14
PB.3228.5	chr13	+	2960	7	full-splice_match	MBNL2	ENST00000343600.8	4596	7	-6	1642	-6	469	multi-exon	FALSE	canonical	1	150007	junction_6	114681.99598987725	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	847	1932	50.0	-43	False	ATTAAA	-25
PB.3228.2	chr13	+	4531	8	novel_not_in_catalog	MBNL2	novel	4487	7	NA	NA	-79600	1	intron_retention	FALSE	canonical	1	6748	junction_1	159696.32091784044	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	679	1746	10.0	0	True	AATAAA	-19
PB.3228.3	chr13	+	4749	9	novel_in_catalog	MBNL2	novel	4487	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	49482	junction_5	154970.05147931003	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	848	1969	20.0	-44	False	AATAAA	-14
PB.3228.1	chr13	+	4470	7	novel_not_in_catalog	MBNL2	novel	4487	7	NA	NA	-79642	-6	intron_retention	FALSE	canonical	1	6748	junction_1	162226.87617928445	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	721	1806	35.0	-42	False	AATAAA	-11
PB.6239.3	chr19	+	4270	2	novel_in_catalog	ZNF304	novel	4313	4	NA	NA	-13	-3	intron_retention	FALSE	canonical	1	1234	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	521	2224	40.0	12	True	NA	NA
PB.6239.2	chr19	+	4406	3	full-splice_match	ZNF304	ENST00000282286.5	4202	3	-207	3	-22	-3	multi-exon	FALSE	canonical	1	30617	junction_1	12423.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	381	2360	40.0	3	True	NA	NA
PB.6239.1	chr19	+	4490	4	full-splice_match	ZNF304	ENST00000598744.1	3331	4	-44	-1115	-25	-3	multi-exon	FALSE	canonical	1	3938	junction_2	23934.170277845205	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	591	2444	40.0	0	True	NA	NA
PB.10892.1	chr7	+	2923	7	full-splice_match	GSTK1	ENST00000479303.1	1185	7	-7	-1731	-2	-8	multi-exon	FALSE	canonical	1	1458219	junction_1	252916.34206025297	NA	2	NA	TRUE	NA	NA	NA	C	coding	282	849	66	914	80.0	8	True	TTTAAA	-17
PB.3228.8	chr13	+	4721	9	full-splice_match	MBNL2	ENST00000345429.10	4669	9	-59	7	0	-6	multi-exon	FALSE	canonical	1	22507	junction_7	157225.33664616526	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	841	1944	35.0	-37	False	AATAAA	-11
PB.3228.9	chr13	+	4626	8	full-splice_match	MBNL2	ENST00000376673.7	4632	8	0	6	0	-6	multi-exon	FALSE	canonical	1	13411	junction_7	165399.30444699887	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	841	1962	35.0	-37	False	AATAAA	-11
PB.9415.6	chr5	-	4814	20	novel_not_in_catalog	CEP120	novel	4900	20	NA	NA	-99	27	any annotated donor/acceptor	FALSE	canonical	1	11570	junction_13	46837.610989424684	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	446	3271	35.0	398	False	AATAAA	-12
PB.1372.1	chr10	+	2947	5	full-splice_match	ZNF33A	ENST00000432900.6	3994	5	-70	1117	-51	-19	multi-exon	FALSE	canonical	1	156744	junction_4	49645.26689927248	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	230	2665	30.0	-3466	False	AATAAA	-20
PB.1372.2	chr10	+	4285	6	novel_not_in_catalog	ZNF33A	novel	6196	6	NA	NA	-5	192	any annotated donor/acceptor	FALSE	canonical	1	16242	junction_5	115458.3014713104	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	595	2694	55.0	-48	True	NA	NA
PB.1372.3	chr10	+	4158	5	full-splice_match	ZNF33A	ENST00000432900.6	3994	5	-20	-144	-1	144	multi-exon	FALSE	canonical	1	156744	junction_4	49645.26689927248	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	180	2615	70.0	-44	True	NA	NA
PB.1372.4	chr10	+	3667	5	full-splice_match	ZNF33A	ENST00000432900.6	3994	5	-12	339	2	-339	multi-exon	FALSE	canonical	1	156744	junction_4	49645.26689927248	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	172	2607	65.0	-36	True	NA	NA
PB.1372.5	chr10	+	4654	5	full-splice_match	ZNF33A	ENST00000432900.6	3994	5	-12	-648	2	648	multi-exon	FALSE	canonical	1	156744	junction_4	49645.26689927248	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	172	2607	65.0	-36	True	NA	NA
PB.1372.6	chr10	+	6092	5	full-splice_match	ZNF33A	ENST00000432900.6	3994	5	6	-2104	5	0	multi-exon	FALSE	canonical	1	156744	junction_4	49645.26689927248	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	154	2589	25.0	-18	True	AATAAA	-24
PB.1372.7	chr10	+	5394	5	full-splice_match	ZNF33A	ENST00000432900.6	3994	5	7	-1407	6	-687	multi-exon	FALSE	canonical	1	156744	junction_4	49645.26689927248	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	153	2588	85.0	-17	True	NA	NA
PB.6243.2	chr19	+	3390	4	novel_not_in_catalog	AC003002.2	novel	521	3	NA	NA	41152	10849	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	9556.215475920488	NA	1	NA	TRUE	NA	NA	NA	B	coding	771	2316	340	2655	35.0	10	True	NA	NA
PB.5846.2	chr19	+	1474	6	full-splice_match	KXD1	ENST00000601630.5	1327	6	-87	-60	1	-8	multi-exon	FALSE	canonical	1	21291	junction_4	554616.4033468177	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	148	735	40.0	13	True	AATAAA	-19
PB.3252.5	chr13	+	2977	2	full-splice_match	ABHD13	ENST00000375898.3	5338	2	132	2229	132	-2229	multi-exon	FALSE	canonical	1	114521	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	170	1183	75.0	12	True	NA	NA
PB.3252.4	chr13	+	2248	2	full-splice_match	ABHD13	ENST00000375898.3	5338	2	110	2980	110	-2980	multi-exon	FALSE	canonical	1	114521	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	192	1205	70.0	-10	True	AATAAA	-14
PB.3252.6	chr13	+	3767	2	full-splice_match	ABHD13	ENST00000375898.3	5338	2	122	1449	122	-1449	multi-exon	FALSE	canonical	1	114521	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	180	1193	70.0	2	True	TTTAAA	-29
PB.3252.1	chr13	+	5224	2	full-splice_match	ABHD13	ENST00000375898.3	5338	2	115	-1	115	1	multi-exon	FALSE	canonical	1	114521	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	187	1200	20.0	-5	True	AATAAA	-34
PB.3252.3	chr13	+	2881	2	full-splice_match	ABHD13	ENST00000375898.3	5338	2	31	2426	31	-2426	multi-exon	FALSE	canonical	1	114521	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	337	1014	271	1284	65.0	9	True	NA	NA
PB.3252.2	chr13	+	1874	2	full-splice_match	ABHD13	ENST00000375898.3	5338	2	117	3347	117	-3347	multi-exon	FALSE	canonical	1	114521	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	185	1198	35.0	-3	True	AATAAA	-17
PB.9840.1	chr6	-	3409	10	novel_in_catalog	TRIM26	novel	3114	3	NA	NA	-15	8	combination_of_known_junctions	TRUE	canonical	1	203841	junction_8	44884.00848717217	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	361	1980	20.0	0	True	NA	NA
PB.9840.2	chr6	-	3246	10	novel_in_catalog	TRIM26	novel	3114	3	NA	NA	-15	8	combination_of_known_junctions	FALSE	canonical	1	894	junction_7	94509.0584164578	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	564	1817	20.0	0	True	NA	NA
PB.9840.3	chr6	-	3506	10	full-splice_match	TRIM26	ENST00000454678.6	3478	10	-30	2	-11	-2	multi-exon	FALSE	canonical	1	14175	junction_7	90849.47087203313	NA	2	NA	TRUE	NA	NA	NA	C	coding	539	1620	468	2087	30.0	4	True	NA	NA
PB.9840.4	chr6	-	3410	10	novel_not_in_catalog	TRIM26	novel	3114	3	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	14265	junction_8	90035.10684720518	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	372	1991	30.0	-26	True	NA	NA
PB.10548.1	chr7	+	3773	9	full-splice_match	LANCL2	ENST00000254770.2	4353	9	574	6	-89	-6	multi-exon	FALSE	canonical	1	138402	junction_1	52875.652856341876	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	17	1357	20.0	0	True	AGTAAA	-24
PB.12139.1	chrX	-	862	3	full-splice_match	CITED1	ENST00000373619.7	886	3	30	-6	-7	-1	multi-exon	FALSE	canonical	1	17359	junction_2	64980.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	193	582	199	780	25.0	-1	True	AATAAA	-28
PB.9840.8	chr6	-	3052	2	novel_not_in_catalog	TRIM26	novel	3478	10	NA	NA	4	-9771	any annotated donor/acceptor	FALSE	canonical	1	37	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	1	True	NA	NA
PB.9840.9	chr6	-	4891	1	novel_in_catalog	TRIM26	novel	3318	9	NA	NA	2	-9771	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-25	True	NA	NA
PB.9409.1	chr5	+	11182	44	novel_in_catalog	DMXL1	novel	577	5	NA	NA	-122	0	combination_of_known_junctions	FALSE	canonical	1	25377	junction_1	38731.26941232222	NA	8	NA	TRUE	NA	NA	NA	C	coding	3027	9084	191	9274	20.0	-4	True	AATAAA	-19
PB.9409.3	chr5	+	11183	43	full-splice_match	DMXL1	ENST00000311085.8	11072	43	-112	1	-11	-1	multi-exon	FALSE	canonical	1	90583	junction_17	32852.8901396307	NA	2	NA	TRUE	NA	NA	NA	C	coding	3027	9084	193	9276	20.0	-21	True	AATAAA	-18
PB.5846.7	chr19	+	3967	5	full-splice_match	KXD1	ENST00000602094.5	2738	5	-1233	4	0	-4	multi-exon	FALSE	canonical	1	58371	junction_1	515460.15148918156	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	2694	3224	35.0	0	True	AATAAA	-23
PB.5846.4	chr19	+	1485	6	full-splice_match	KXD1	ENST00000540691.5	1592	6	90	17	14	-8	multi-exon	FALSE	canonical	1	18057	junction_1	592057.3543755369	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	216	746	40.0	6	True	AATAAA	-19
PB.7474.23	chr21	+	3650	2	incomplete-splice_match	GABPA	ENST00000400075.3	4814	10	29209	2	29204	-2	5prime_fragment	FALSE	canonical	1	40566	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	86	261	164	424	15.0	298	False	AATAAA	-13
PB.285.3	chr1	+	4027	19	full-splice_match	AGO1	ENST00000373204.5	13708	19	-8	9689	-8	-119	multi-exon	FALSE	canonical	1	68223	junction_1	42247.91735037888	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	222	2795	80.0	-14	True	NA	NA
PB.465.14	chr1	-	4115	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-31	-602	-2	602	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	118	1344	30.0	0	True	AATAAA	-15
PB.7474.20	chr21	+	4784	10	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	35	-2	any annotated donor/acceptor	FALSE	canonical	1	16	junction_5	29109.063612474067	NA	10	NA	TRUE	NA	NA	NA	C	coding	454	1365	194	1558	15.0	-31	True	AATAAA	-13
PB.9867.1	chr6	+	1393	6	full-splice_match	MICA	ENST00000449934.6	1386	6	-9	2	-9	0	multi-exon	FALSE	canonical	1	202507	junction_1	83974.54635542844	NA	1	NA	TRUE	NA	NA	NA	A	coding	332	999	64	1062	15.0	-25	True	NA	NA
PB.7474.21	chr21	+	4812	10	novel_not_in_catalog	GABPA	novel	5120	10	NA	NA	38	-2	any annotated donor/acceptor	FALSE	canonical	1	16	junction_5	31095.797583167623	NA	4	1	TRUE	NA	NA	NA	C	coding	253	762	825	1586	15.0	-28	True	AATAAA	-13
PB.7043.56	chr2	-	2113	4	incomplete-splice_match	SERPINE2	ENST00000409304.5	2161	9	3	15472	3	-5775	3prime_fragment	FALSE	canonical	1	893005	junction_3	256428.7605779733	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	210	953	80.0	0	True	NA	NA
PB.1166.1	chr1	-	3936	23	full-splice_match	PARP1	ENST00000366794.9	3958	23	-20	42	-14	-42	multi-exon	FALSE	canonical	1	256970	junction_13	508193.5105697195	NA	2	NA	TRUE	NA	NA	NA	C	coding	1014	3045	165	3209	35.0	-4	True	ATTAAA	-29
PB.7701.1	chr22	-	2830	1	full-splice_match	AC004832.4	ENST00000608952.1	331	1	-2638	139	-2638	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-7	True	NA	NA
PB.3619.8	chr14	-	3544	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	15493	junction_15	209392.52935908566	NA	1	NA	TRUE	NA	NA	NA	B	coding	833	2502	294	2795	25.0	-1	True	ATTAAA	-20
PB.1814.4	chr11	-	7428	40	novel_not_in_catalog	SBF2	novel	7439	40	NA	NA	295	-126	intron_retention	TRUE	canonical	1	1575	junction_39	38692.38730023586	NA	5	2	TRUE	NA	NA	NA	C	coding	1313	3942	1862	5803	45.0	9924	False	ATTAAA	-11
PB.1814.1	chr11	-	7333	40	full-splice_match	SBF2	ENST00000256190.12	7439	40	-20	126	-20	-126	multi-exon	FALSE	canonical	1	63840	junction_15	27496.02860635752	NA	0	NA	TRUE	NA	NA	NA	C	coding	1849	5550	159	5708	45.0	9609	False	ATTAAA	-11
PB.3619.2	chr14	-	3947	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	1	15493	junction_15	209392.52935908566	NA	3	NA	TRUE	NA	NA	NA	B	coding	833	2502	294	2795	15.0	-1	True	AATAAA	-29
PB.3619.1	chr14	-	3906	16	novel_in_catalog	PPP4R3A	novel	4108	15	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	1	15493	junction_15	206123.6284375202	NA	0	NA	TRUE	NA	NA	NA	B	coding	820	2463	293	2755	15.0	0	True	AATAAA	-28
PB.5026.1	chr17	-	2306	9	incomplete-splice_match	MPP3	ENST00000398389.8	2182	20	-3	22785	-3	813	3prime_fragment	FALSE	canonical	1	37353	junction_8	14145.204787643584	NA	0	NA	TRUE	NA	NA	NA	A	coding	319	960	170	1129	75.0	-28	True	AATACA	-37
PB.6912.3	chr2	+	1830	6	full-splice_match	NABP1	ENST00000410026.6	11521	6	-26	9717	-17	3	multi-exon	FALSE	canonical	1	112657	junction_1	141084.25335890608	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	282	656	20.0	-6	True	AATAAA	-25
PB.4661.1	chr17	+	2827	7	incomplete-splice_match	SGSM2	ENST00000268989.7	4863	24	37739	0	-1109	0	5prime_fragment	FALSE	canonical	1	430132	junction_5	80545.0130432598	NA	0	NA	TRUE	NA	NA	NA	A	coding	419	1260	38	1297	25.0	-5	True	AATAAA	-12
PB.5569.6	chr19	+	1995	12	full-splice_match	DAZAP1	ENST00000587079.5	2086	12	94	-3	39	-1	multi-exon	FALSE	canonical	1	293151	junction_4	474237.8458771836	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	1	1221	5.0	0	True	AATAAA	-26
PB.6912.6	chr2	+	2879	3	incomplete-splice_match	NABP1	ENST00000451500.5	2015	7	-11	2042	0	-961	intron_retention	FALSE	canonical	1	304550	junction_1	74488.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	480	785	85.0	0	True	TTTAAA	-14
PB.11724.10	chr9	+	3030	10	novel_in_catalog	HSDL2	novel	3350	11	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	23837	junction_1	158719.88844883261	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	274	1170	30.0	-21	True	NA	NA
PB.3352.5	chr14	-	1954	17	novel_not_in_catalog	RABGGTA	novel	735	3	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	1899	junction_11	111266.0766978614	NA	1	1	TRUE	NA	NA	NA	C	coding	297	894	986	1879	15.0	12	True	AATAAA	-27
PB.3733.30	chr15	-	2814	9	full-splice_match	UBE3A	ENST00000625778.2	3217	9	43	360	0	14	multi-exon	FALSE	canonical	1	103543	junction_8	107340.91787966972	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2253	561	2813	30.0	-21	True	AAGAAA	-7
PB.7232.10	chr20	+	4651	7	full-splice_match	POFUT1	ENST00000375749.7	5235	7	-2	586	-2	-586	multi-exon	FALSE	canonical	1	240350	junction_1	41792.834554967536	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	65	1231	15.0	-12	True	NA	NA
PB.6912.2	chr2	+	3070	6	novel_in_catalog	NABP1	novel	855	3	NA	NA	-26	-3	intron_retention	FALSE	canonical	1	112657	junction_1	153656.43059891768	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	1597	1902	30.0	-7572	False	AATAAA	-19
PB.11854.6	chr9	+	2220	10	novel_not_in_catalog	EXOSC2	novel	739	6	NA	NA	1	2713	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	192016.1959379186	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	17	898	30.0	-4	True	AATAAA	-18
PB.1223.8	chr1	-	2954	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	-1	-1606	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	4	1	TRUE	NA	NA	NA	B	coding	244	735	204	938	30.0	-29	False	ATTAAA	-21
PB.7592.1	chr22	-	2220	8	novel_in_catalog	HDHD5	novel	1735	8	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	1	44067	junction_7	159092.23682313276	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	815	1720	15.0	-39	True	AATAAA	-29
PB.7262.38	chr20	-	2885	4	novel_not_in_catalog	CPNE1	novel	2147	18	NA	NA	-5	6906	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	280204.2684380252	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	223	2385	25.0	-7	True	AATAAA	-15
PB.7041.12	chr2	+	1498	3	incomplete-splice_match	MRPL44	ENST00000258383.3	1748	4	2129	3	2129	-3	5prime_fragment	FALSE	canonical	1	519918	junction_1	48457.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	185	558	264	821	30.0	-421	False	AATAAA	-20
PB.7041.11	chr2	+	3054	3	novel_in_catalog	MRPL44	novel	1748	4	NA	NA	44	-532	intron_retention	FALSE	canonical	1	519918	junction_1	48457.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	185	558	2349	2906	20.0	-15	True	ATTAAA	-13
PB.7262.30	chr20	-	3801	3	full-splice_match	RBM12	ENST00000374104.7	5213	3	-32	1444	2	-1444	multi-exon	FALSE	canonical	1	91812	junction_2	271577.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	249	3047	15.0	-1	True	AATAAA	-19
PB.9924.22	chr6	-	3072	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-27	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	337687.29984030715	NA	32	1	TRUE	NA	NA	NA	C	coding	448	1347	36	1382	30.0	-8	True	AATAAA	-20
PB.7262.32	chr20	-	3725	3	full-splice_match	RBM12	ENST00000374114.7	6662	3	10	2927	-6	-1526	multi-exon	FALSE	canonical	1	290176	junction_2	172395.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	255	3053	30.0	-7	True	TATAAA	-30
PB.7262.33	chr20	-	3557	3	full-splice_match	RBM12	ENST00000374114.7	6662	3	10	3095	-6	-1694	multi-exon	FALSE	canonical	1	290176	junction_2	172395.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	255	3053	20.0	-7	True	AATAAA	-19
PB.7262.34	chr20	-	3534	3	full-splice_match	RBM12	ENST00000374104.7	5213	3	-15	1694	1	-1694	multi-exon	FALSE	canonical	1	91812	junction_2	271577.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	932	2799	232	3030	20.0	-16	True	AATAAA	-19
PB.7262.36	chr20	-	3541	3	full-splice_match	RBM12	ENST00000424458.5	1068	3	-43	-2430	2	-1694	multi-exon	FALSE	canonical	1	20825	junction_2	307071.0	NA	2	1	TRUE	NA	NA	NA	C	coding	932	2799	239	3037	20.0	-1	True	AATAAA	-19
PB.7262.37	chr20	-	3475	2	novel_not_in_catalog	CPNE1	novel	2147	18	NA	NA	-2	6906	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	932	2799	177	2975	25.0	-4	True	AATAAA	-15
PB.1223.3	chr1	-	4972	14	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_7	41694.15271747829	NA	5	1	TRUE	NA	NA	NA	B	coding	209	630	176	805	10.0	-1	True	ATTAAA	-15
PB.8004.4	chr3	-	3826	17	novel_not_in_catalog	UBP1	novel	4148	16	NA	NA	30	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	184803.88269289988	NA	9	1	TRUE	NA	NA	NA	C	coding	540	1623	212	1834	35.0	29	True	AATAAA	-20
PB.959.1	chr1	+	4470	9	novel_not_in_catalog	FAM20B	novel	603	3	NA	NA	113	3	any annotated donor/acceptor	FALSE	canonical	1	253	junction_8	113566.87752755807	NA	2	NA	TRUE	NA	NA	NA	B	coding	409	1230	224	1453	15.0	50	False	AATAAA	-17
PB.10994.8	chr8	+	1992	11	full-splice_match	VPS37A	ENST00000521829.5	1307	11	-182	-503	3	278	multi-exon	FALSE	canonical	1	11064	junction_1	107672.59233732603	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	305	1423	25.0	-17	True	AATAAA	-13
PB.959.3	chr1	+	3855	9	novel_not_in_catalog	FAM20B	novel	603	3	NA	NA	127	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	113627.38012111121	NA	2	NA	TRUE	NA	NA	NA	B	coding	409	1230	210	1439	15.0	64	False	AATAAA	-18
PB.959.2	chr1	+	4065	9	novel_not_in_catalog	FAM20B	novel	603	3	NA	NA	113	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	113627.38012111121	NA	1	NA	TRUE	NA	NA	NA	B	coding	409	1230	224	1453	15.0	50	False	AATAAA	-18
PB.1223.1	chr1	-	4531	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	26	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	4	1	TRUE	NA	NA	NA	B	coding	244	735	177	911	10.0	-2	True	ATTAAA	-15
PB.7971.6	chr3	+	1970	6	full-splice_match	RAB5A	ENST00000273047.8	2536	6	293	273	-7	-273	multi-exon	FALSE	canonical	1	308283	junction_3	77062.28066440806	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	244	891	50.0	-7	True	AATAAA	-20
PB.11374.1	chr8	-	1455	1	antisense	novelGene_GSDMD_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-4	True	NA	NA
PB.5920.2	chr19	-	3003	4	full-splice_match	ZNF792	ENST00000404801.1	3888	4	-235	1120	-235	0	multi-exon	FALSE	canonical	1	20628	junction_3	9533.022792144975	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	623	2521	15.0	-3	True	GATAAA	-17
PB.5920.1	chr19	-	3910	4	full-splice_match	ZNF792	ENST00000404801.1	3888	4	-22	0	-22	0	multi-exon	FALSE	canonical	1	20628	junction_3	9533.022792144975	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	410	2308	5.0	-1	True	NA	NA
PB.6912.4	chr2	+	2275	6	full-splice_match	NABP1	ENST00000425611.6	1878	6	-404	7	1	2	multi-exon	FALSE	canonical	1	204534	junction_3	97845.95433925718	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	488	1102	15.0	-8	True	AATAAA	-24
PB.1223.6	chr1	-	3573	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	-1	-987	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	4	1	TRUE	NA	NA	NA	B	coding	244	735	204	938	35.0	-29	False	ATTAAA	-16
PB.722.2	chr1	+	1738	12	incomplete-splice_match	PRPF3	ENST00000324862.6	2433	16	8	8707	5	113	3prime_fragment	FALSE	canonical	1	72814	junction_8	113406.25226376364	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	158	1738	65.0	-104	False	NA	NA
PB.8059.3	chr3	+	2382	4	novel_in_catalog	ZNF502	novel	3173	3	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	5447	junction_1	12005.063718651763	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	223	1857	100.0	16	True	NA	NA
PB.1223.4	chr1	-	4024	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	27	-508	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	31	1	TRUE	NA	NA	NA	B	coding	244	735	176	910	15.0	-1	True	ATTAAA	-14
PB.7971.9	chr3	+	2353	7	novel_not_in_catalog	RAB5A	novel	2536	6	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	53	junction_3	197776.85664545168	NA	4	1	TRUE	NA	NA	NA	C	coding	163	492	519	1010	40.0	0	True	AATAAA	-8
PB.6051.2	chr19	+	1703	5	novel_in_catalog	ZNF222	novel	537	4	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	1	10609	junction_1	22372.685925029207	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	180	1628	25.0	-33	True	NA	NA
PB.6051.1	chr19	+	1652	4	full-splice_match	ZNF222	ENST00000391960.3	1595	4	-62	5	-4	-3	multi-exon	FALSE	canonical	1	34009	junction_1	12994.843857811024	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	100	1575	35.0	-41	True	NA	NA
PB.7971.8	chr3	+	2397	7	full-splice_match	RAB5A	ENST00000446547.5	1358	7	-20	-1019	0	-9	multi-exon	FALSE	canonical	1	2338	junction_2	195819.89516191205	NA	3	NA	TRUE	NA	NA	NA	C	coding	128	387	668	1054	40.0	0	True	AATAAA	-8
PB.8734.14	chr4	-	3588	4	full-splice_match	TLR10	ENST00000308973.8	3958	4	-32	402	0	-28	multi-exon	FALSE	canonical	1	22860	junction_3	4182.1645379184	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	681	3074	95.0	-1	True	NA	NA
PB.7725.1	chr22	-	1990	12	full-splice_match	RTCB	ENST00000216038.5	2027	12	19	18	5	-18	multi-exon	FALSE	canonical	1	652099	junction_9	236797.63865226624	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	81	1598	25.0	10	True	AAGAAA	-11
PB.722.6	chr1	+	2106	10	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	62	-3270	combination_of_known_junctions	FALSE	canonical	1	72814	junction_9	119885.38046272096	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	602	1489	100.0	-12	True	NA	NA
PB.1362.9	chr10	-	3910	17	novel_in_catalog	ITGB1	novel	3729	16	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	1	381	junction_3	2138291.565933026	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2226	508	2733	20.0	-28	True	ATTAAA	-24
PB.8734.16	chr4	-	3851	2	novel_in_catalog	TLR10	novel	3958	4	NA	NA	3	-29	intron_retention	FALSE	canonical	1	22860	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	945	3338	95.0	3	True	NA	NA
PB.1169.7	chr1	+	2251	13	full-splice_match	PSEN2	ENST00000366783.7	2306	13	56	-1	-1	1	multi-exon	FALSE	canonical	1	42900	junction_1	46588.284619991464	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	393	1727	20.0	3	True	AATAAA	-25
PB.1464.14	chr10	-	2665	14	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	9320	junction_6	272722.5848139417	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	134	1231	35.0	-1	True	NA	NA
PB.1464.15	chr10	-	2638	14	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-15	0	no_combination_of_known_junctions	FALSE	canonical	1	7228	junction_12	316992.58447644045	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	297	1640	35.0	0	True	NA	NA
PB.1464.16	chr10	-	2626	14	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	9320	junction_6	334152.2812348255	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	132	1160	35.0	1	True	NA	NA
PB.1464.17	chr10	-	2638	14	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-15	0	no_combination_of_known_junctions	FALSE	canonical	1	7228	junction_12	284726.53053402103	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	297	1640	35.0	0	True	NA	NA
PB.1464.10	chr10	-	2829	16	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	9648	junction_15	312263.4842324596	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	227	1831	35.0	-1	True	NA	NA
PB.1464.11	chr10	-	2807	16	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	20304	junction_7	280575.4668464717	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	134	1285	35.0	-1	True	NA	NA
PB.1464.12	chr10	-	2744	15	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	-15	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	287668.4474883404	NA	7	1	TRUE	NA	NA	NA	C	coding	383	1152	133	1284	35.0	0	True	NA	NA
PB.1464.13	chr10	-	2699	15	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	14337	junction_8	273949.1718770517	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	134	1162	35.0	-1	True	NA	NA
PB.1169.5	chr1	+	2111	12	novel_in_catalog	PSEN2	novel	734	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	4934	junction_1	57340.92080034472	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	253	1587	20.0	0	True	AATAAA	-25
PB.8734.13	chr4	-	3191	2	full-splice_match	TLR10	ENST00000361424.6	3484	2	2	291	1	83	multi-exon	FALSE	canonical	1	21404	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	173	2566	50.0	1	True	NA	NA
PB.11752.18	chr9	-	5580	35	novel_in_catalog	CDK5RAP2	novel	5551	35	NA	NA	3	-5402	combination_of_known_junctions	FALSE	canonical	1	30577	junction_17	80363.02245879508	NA	0	NA	TRUE	NA	NA	NA	C	coding	1796	5388	193	5580	55.0	-9	True	AATGAA	-23
PB.3121.1	chr13	-	1323	7	full-splice_match	MRPS31	ENST00000323563.7	1462	7	-30	169	-30	-8	multi-exon	FALSE	canonical	1	310343	junction_6	29709.327338209612	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	161	1255	20.0	-35	True	AATAAA	-14
PB.3121.2	chr13	-	4090	6	novel_in_catalog	MRPS31	novel	1462	7	NA	NA	-17	-8	intron_retention	FALSE	canonical	1	310343	junction_5	32515.344841474463	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	55	810	20.0	-22	True	AATAAA	-14
PB.3121.3	chr13	-	5834	6	novel_in_catalog	MRPS31	novel	1462	7	NA	NA	-17	-10	intron_retention	FALSE	canonical	1	2223	junction_2	146377.2470961249	NA	3	NA	TRUE	NA	NA	NA	C	coding	251	756	55	810	25.0	-22	True	AATAAA	-12
PB.9713.9	chr6	-	3727	14	novel_in_catalog	F13A1	novel	3999	15	NA	NA	-57	0	no_combination_of_known_junctions	FALSE	canonical	1	6559	junction_1	97039.91220074859	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	132	2042	25.0	-38	False	AATAAA	-15
PB.9713.8	chr6	-	4018	15	full-splice_match	F13A1	ENST00000264870.7	3999	15	-19	0	-19	0	multi-exon	FALSE	canonical	1	240507	junction_9	52698.93605076532	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	286	2484	25.0	-192	False	AATAAA	-15
PB.9713.7	chr6	-	3159	11	novel_not_in_catalog	F13A1	novel	3999	15	NA	NA	-23976	4	any annotated donor/acceptor	FALSE	canonical	1	831	junction_10	98569.06681921058	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	149	1621	30.0	NA	False	AATAAA	-19
PB.9713.6	chr6	-	3957	16	novel_not_in_catalog	F13A1	novel	3999	15	NA	NA	-20	5	any annotated donor/acceptor	FALSE	canonical	1	263	junction_6	114746.21598203381	NA	1	1	TRUE	NA	NA	NA	C	coding	450	1353	95	1447	30.0	-1	True	AATAAA	-20
PB.3352.2	chr14	-	1944	17	full-splice_match	RABGGTA	ENST00000216840.10	2088	17	143	1	1	-1	multi-exon	FALSE	canonical	1	99674	junction_16	78024.69595320345	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	165	1868	15.0	-2	True	AATAAA	-28
PB.1169.1	chr1	+	2603	14	novel_not_in_catalog	PSEN2	novel	734	4	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	7264	junction_10	70550.7314165366	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	444	1397	20.0	-48	False	AATAAA	-16
PB.4279.1	chr16	-	1655	4	incomplete-splice_match	RPS15A	ENST00000563390.5	525	5	49	12	0	0	intron_retention	FALSE	canonical	1	4951873	junction_1	2794880.370258448	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	1222	1614	5.0	-1	True	AATAAA	-14
PB.1362.1	chr10	-	6745	16	full-splice_match	ITGB1	ENST00000302278.7	3640	16	-41	-3064	-18	2991	multi-exon	FALSE	canonical	1	381	junction_3	1886954.2506506746	NA	7	NA	TRUE	NA	NA	NA	C	coding	798	2397	107	2503	20.0	-31	True	NA	NA
PB.9713.1	chr6	-	4228	15	novel_not_in_catalog	F13A1	novel	3999	15	NA	NA	-20	6	any annotated donor/acceptor	FALSE	canonical	1	4206	junction_5	93482.67946174274	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	95	1468	30.0	-1	True	AATAAA	-21
PB.4279.2	chr16	-	511	5	full-splice_match	RPS15A	ENST00000322989.8	2203	5	17	1675	17	-1	multi-exon	FALSE	canonical	1	2137097	junction_4	3514797.381566966	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	80	472	10.0	8472	False	AATAAA	-12
PB.9464.2	chr5	-	1912	9	novel_in_catalog	H2AFY	novel	2789	9	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	1	504223	junction_4	745633.1585116836	NA	1	NA	TRUE	NA	NA	NA	B	coding	368	1107	207	1313	15.0	-7	True	AGTAAA	-18
PB.11752.19	chr9	-	6226	32	incomplete-splice_match	CDK5RAP2	ENST00000349780.8	6228	38	8	17051	8	225	3prime_fragment	FALSE	canonical	1	117178	junction_16	57106.91317689244	NA	0	NA	TRUE	NA	NA	NA	C	coding	1667	5004	176	5179	10.0	8	True	ATTAAA	-31
PB.9464.3	chr5	-	2057	10	novel_not_in_catalog	H2AFY	novel	2789	9	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	34514	junction_2	851729.7986052694	NA	0	NA	TRUE	NA	NA	NA	B	coding	342	1029	199	1227	10.0	1	True	AGTAAA	-14
PB.11854.1	chr9	+	1666	9	full-splice_match	EXOSC2	ENST00000372358.9	2040	9	42	332	3	-332	multi-exon	FALSE	canonical	1	333224	junction_6	124779.55120306171	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	30	911	80.0	-17	True	NA	NA
PB.8734.19	chr4	-	3398	3	full-splice_match	TLR10	ENST00000613579.4	3801	3	0	403	0	-29	multi-exon	FALSE	canonical	1	10557	junction_1	6151.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	492	2885	95.0	-1	True	NA	NA
PB.649.8	chr1	+	5214	26	novel_in_catalog	WDR3	novel	1035	10	NA	NA	-14	-6487	intron_retention	FALSE	canonical	1	111996	junction_1	80431.15650094807	NA	1	NA	TRUE	NA	NA	NA	C	coding	861	2586	62	2647	55.0	0	True	AATAAA	-17
PB.8734.18	chr4	-	3301	3	full-splice_match	TLR10	ENST00000502321.5	676	3	-1	-2624	0	-29	multi-exon	FALSE	canonical	1	3175	junction_1	9842.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	797	2394	395	2788	95.0	-1	True	NA	NA
PB.7111.42	chr2	-	2485	16	incomplete-splice_match	HDLBP	ENST00000391976.6	4489	28	100	17198	11	160	3prime_fragment	FALSE	canonical	1	286089	junction_15	805827.2386846369	NA	2	1	TRUE	NA	NA	NA	C	coding	656	1971	194	2164	35.0	32	True	TTTAAA	-39
PB.6443.11	chr2	-	4525	38	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	-3	10	any annotated donor/acceptor	FALSE	canonical	1	2141	junction_4	308189.3155804852	NA	1	1	TRUE	NA	NA	NA	C	coding	1277	3834	62	3895	15.0	-4	True	ATTAAA	-25
PB.6443.12	chr2	-	4525	38	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	3	9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	322297.4485444804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1384	4155	40	4194	15.0	2	True	ATTAAA	-24
PB.6443.13	chr2	-	4553	38	full-splice_match	LRPPRC	ENST00000260665.11	6335	38	15	1767	-1	3	multi-exon	FALSE	canonical	1	374963	junction_37	277755.02096967417	NA	0	NA	TRUE	NA	NA	NA	C	coding	1394	4185	44	4228	30.0	-2	True	ATTAAA	-18
PB.7111.46	chr2	-	1958	15	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	4	-405	combination_of_known_junctions	FALSE	canonical	1	39912	junction_14	807747.0474136785	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1803	154	1956	60.0	-3	True	NA	NA
PB.6122.1	chr19	-	3423	2	incomplete-splice_match	FUT1	ENST00000645652.1	3992	5	1019	2	1019	-2	5prime_fragment	FALSE	canonical	1	24256	junction_1	0.0	NA	22	NA	TRUE	NA	NA	NA	A	coding	365	1098	155	1252	15.0	-1	True	ATTAAA	-14
PB.6443.16	chr2	-	4198	38	full-splice_match	LRPPRC	ENST00000260665.11	6335	38	151	1986	122	-215	multi-exon	FALSE	canonical	1	374963	junction_37	277755.02096967417	NA	1	NA	TRUE	NA	NA	NA	C	coding	1307	3924	169	4092	20.0	150	False	AATAAA	-22
PB.7111.45	chr2	-	1983	15	incomplete-splice_match	HDLBP	ENST00000391975.5	6372	28	50	19805	-2	-405	3prime_fragment	FALSE	canonical	1	545798	junction_14	701783.2315975606	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1803	179	1981	60.0	-3	True	NA	NA
PB.609.8	chr1	+	1911	9	full-splice_match	CEPT1	ENST00000357172.8	2198	9	-3	290	-3	4	multi-exon	FALSE	canonical	1	216626	junction_1	79458.13082441202	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	159	1409	35.0	-24	True	AATAAA	-19
PB.11705.8	chr9	+	2171	11	novel_in_catalog	RAD23B	novel	716	5	NA	NA	-14	-1740	combination_of_known_junctions	FALSE	canonical	1	10214	junction_1	563328.9209525462	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	149	1378	15.0	-14	True	AGTAAA	-16
PB.11705.9	chr9	+	2610	11	novel_in_catalog	RAD23B	novel	716	5	NA	NA	-10	-1297	combination_of_known_junctions	FALSE	canonical	1	10214	junction_1	563328.9209525462	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	145	1374	15.0	-10	True	ATTAAA	-18
PB.11720.19	chr9	+	3111	5	incomplete-splice_match	UGCG	ENST00000374279.3	4007	9	29616	3	-2867	-3	5prime_fragment	FALSE	canonical	1	404916	junction_1	69096.08407319477	NA	4	NA	TRUE	NA	NA	NA	C	coding	238	717	26	742	40.0	-8358	False	AATAAA	-17
PB.11705.4	chr9	+	2056	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	315	1748	315	-1743	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	37	1266	15.0	0	True	AGTAAA	-13
PB.11705.5	chr9	+	3802	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	315	2	315	0	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	37	1266	25.0	0	True	TATAAA	-18
PB.11705.6	chr9	+	2688	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	274	1157	274	-1152	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	78	1307	45.0	-1301	False	TATAAA	-12
PB.11705.7	chr9	+	2501	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	316	1302	316	-1297	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	36	1265	15.0	1	True	ATTAAA	-18
PB.11705.1	chr9	+	2715	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	-40	1444	-40	-1439	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	392	1621	45.0	3	True	ATTAAA	-41
PB.11705.2	chr9	+	3297	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	313	509	313	-504	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	39	1268	80.0	-2	True	NA	NA
PB.11705.3	chr9	+	3170	10	full-splice_match	RAD23B	ENST00000358015.7	4119	10	318	631	318	-626	multi-exon	FALSE	canonical	1	222640	junction_3	477478.5898488015	NA	3	1	TRUE	NA	NA	NA	C	coding	409	1230	34	1263	25.0	3	True	AATAAA	-17
PB.4330.1	chr16	-	2155	2	incomplete-splice_match	AC016597.1	ENST00000610941.4	947	3	-32	8006	-32	-8001	3prime_fragment	FALSE	canonical	1	11979	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	141	426	15	440	20.0	2688	False	NA	NA
PB.391.2	chr1	-	3835	7	full-splice_match	ATPAF1	ENST00000329231.8	1241	7	88	-2682	25	-4	multi-exon	FALSE	canonical	1	62386	junction_1	183690.2465142671	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	18	800	30.0	24	True	NA	NA
PB.11608.3	chr9	-	3806	10	novel_not_in_catalog	NMRK1	novel	2050	10	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	38555	junction_8	81216.35727388607	NA	2	NA	TRUE	NA	NA	NA	C	coding	203	612	2849	3460	30.0	-11	True	NA	NA
PB.2499.7	chr12	+	2729	3	full-splice_match	GOLT1B	ENST00000535593.5	813	3	10	-1926	-2	-251	multi-exon	FALSE	canonical	1	9396	junction_1	236174.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-24	True	AATAAA	-17
PB.2499.6	chr12	+	2452	4	novel_in_catalog	GOLT1B	novel	813	3	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	367213	junction_1	54010.24104741618	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-26	True	ATTAAA	-15
PB.2499.5	chr12	+	3168	6	full-splice_match	GOLT1B	ENST00000539025.5	1210	6	-40	-1918	-4	-251	multi-exon	FALSE	canonical	1	22629	junction_3	209788.7427193366	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-26	True	AATAAA	-17
PB.2499.4	chr12	+	3276	6	full-splice_match	GOLT1B	ENST00000542194.1	562	6	-69	-2645	3	-17	multi-exon	FALSE	canonical	1	9988	junction_3	214568.19111974636	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-31	True	AATAAA	-20
PB.2499.3	chr12	+	2681	2	full-splice_match	GOLT1B	ENST00000545113.1	555	2	-34	-2092	0	1442	multi-exon	FALSE	canonical	1	367213	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-34	True	NA	NA
PB.2499.2	chr12	+	3045	6	full-splice_match	GOLT1B	ENST00000542194.1	562	6	-72	-2411	0	-251	multi-exon	FALSE	canonical	1	9988	junction_3	214568.19111974636	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-34	True	AATAAA	-17
PB.2499.1	chr12	+	4416	4	novel_in_catalog	GOLT1B	novel	813	3	NA	NA	0	-251	intron_retention	FALSE	canonical	1	367213	junction_1	54010.24104741618	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-34	True	AATAAA	-17
PB.4265.1	chr16	+	2177	14	novel_in_catalog	AC138932.1	novel	6830	31	NA	NA	10322	16319	intron_retention	FALSE	canonical	1	265	junction_13	123527.74955148513	NA	0	NA	TRUE	NA	NA	NA	A	coding	306	921	129	1049	70.0	NA	False	AAGAAA	-7
PB.4293.9	chr16	-	2767	10	novel_not_in_catalog	ERI2	novel	1479	11	NA	NA	-3	0	intron_retention	FALSE	canonical	1	391	junction_9	54941.98228591842	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	447	1007	35.0	-8	True	AATAAA	-17
PB.4293.8	chr16	-	2873	10	novel_in_catalog	ERI2	novel	1479	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	15351	junction_9	45499.756164046135	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	553	1113	35.0	-1	True	AATAAA	-17
PB.11245.3	chr8	-	2657	12	full-splice_match	CCNE2	ENST00000396133.7	1361	12	53	-1349	0	-38	multi-exon	FALSE	canonical	1	1658	junction_1	48084.57064965833	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	52	1176	80.0	-1	True	TATAAA	-40
PB.2499.9	chr12	+	4650	4	novel_in_catalog	GOLT1B	novel	813	3	NA	NA	0	-5	intron_retention	FALSE	canonical	1	367213	junction_1	54010.24104741618	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-22	True	AATAAA	-32
PB.2499.8	chr12	+	2820	4	full-splice_match	GOLT1B	ENST00000545093.5	700	4	-25	-2095	-1	-251	multi-exon	FALSE	canonical	1	13849	junction_2	199139.59299446206	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-23	True	AATAAA	-17
PB.6754.11	chr2	+	4243	25	novel_not_in_catalog	RAB3GAP1	novel	4914	24	NA	NA	-6	-6	intron_retention	FALSE	canonical	0	0	junction_3	143829.82809467256	NA	1	NA	TRUE	NA	NA	NA	C	coding	875	2628	426	3053	80.0	-1	True	AATAGA	-23
PB.9232.1	chr5	-	7407	16	novel_in_catalog	IL6ST	novel	9057	17	NA	NA	5	-1513	intron_retention	FALSE	canonical	1	8017	junction_5	289737.1788263441	NA	2	NA	TRUE	NA	NA	NA	C	coding	884	2655	309	2963	25.0	-35	True	AATAAA	-25
PB.6754.13	chr2	+	4360	25	novel_not_in_catalog	RAB3GAP1	novel	4914	24	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	226	junction_2	143890.37301342541	NA	1	NA	TRUE	NA	NA	NA	C	coding	875	2628	540	3167	85.0	4	True	AATAGA	-26
PB.6754.12	chr2	+	4887	3	full-splice_match	RAB3GAP1	ENST00000425393.1	1139	3	-6	-3742	-5	3742	multi-exon	FALSE	canonical	1	260691	junction_1	79692.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.6754.15	chr2	+	3075	12	incomplete-splice_match	RAB3GAP1	ENST00000539493.2	3161	24	40695	5616	6470	-3	intron_retention	FALSE	canonical	1	291117	junction_1	98972.66655366926	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	83	1882	85.0	-5327	False	AATAGA	-26
PB.9106.8	chr4	-	1782	3	novel_not_in_catalog	TRIML2	novel	1639	7	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_2	20940.0	NA	6	NA	TRUE	NA	NA	NA	B	coding	195	588	1093	1680	30.0	-1	True	AATAAA	-15
PB.9106.7	chr4	-	3688	7	novel_not_in_catalog	TRIML2	novel	1639	7	NA	NA	0	3	intron_retention	FALSE	canonical	1	6552	junction_6	16654.452311786044	NA	0	NA	TRUE	NA	NA	NA	B	coding	221	666	584	1249	30.0	-1	True	AATAAA	-16
PB.10566.1	chr7	-	4811	5	novel_in_catalog	ZNF117	novel	9080	4	NA	NA	-37	1319	no_combination_of_known_junctions	FALSE	canonical	1	58560	junction_3	44861.898652280644	NA	16	NA	TRUE	NA	NA	NA	A	coding	322	966	3845	4810	55.0	-1	True	TTTAAA	-23
PB.10566.2	chr7	-	3238	2	full-splice_match	ERV3-1	ENST00000394323.2	2719	2	-66	-453	24	453	multi-exon	FALSE	canonical	1	79700	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	688	2382	5.0	1	True	NA	NA
PB.10566.3	chr7	-	1820	1	novel_in_catalog	ERV3-1	novel	1729	2	NA	NA	26	1186	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	54	165	175	339	90.0	3	True	NA	NA
PB.9232.3	chr5	-	7349	16	novel_in_catalog	IL6ST	novel	9057	17	NA	NA	-25	-1520	intron_retention	FALSE	canonical	1	14167	junction_6	301989.2909718194	NA	2	NA	TRUE	NA	NA	NA	C	coding	857	2574	339	2912	15.0	35	False	AATAAA	-18
PB.9106.1	chr4	-	2849	8	novel_in_catalog	TRIML2	novel	1639	7	NA	NA	0	25	intron_retention	FALSE	canonical	1	1857	junction_3	18900.388147401867	NA	2	1	TRUE	NA	NA	NA	B	coding	221	666	581	1246	20.0	-1	True	AATAAA	-38
PB.609.4	chr1	+	2322	9	full-splice_match	CEPT1	ENST00000357172.8	2198	9	-123	-1	-123	1	multi-exon	FALSE	canonical	1	216626	junction_1	79458.13082441202	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	279	1529	10.0	-5624	False	AATAAA	-22
PB.9232.2	chr5	-	7520	17	full-splice_match	IL6ST	ENST00000381298.6	9057	17	-7	1544	-7	-1514	multi-exon	FALSE	canonical	1	160090	junction_13	266500.2824269068	NA	1	NA	TRUE	NA	NA	NA	C	coding	918	2757	321	3077	20.0	-47	True	AATAAA	-24
PB.10265.1	chr6	-	7238	30	full-splice_match	SHPRH	ENST00000367505.6	7201	30	-41	4	-7	2	multi-exon	FALSE	canonical	1	63731	junction_19	20386.83288543593	NA	1	NA	TRUE	NA	NA	NA	C	coding	1683	5052	307	5358	35.0	-8	True	AATAAA	-17
PB.10265.2	chr6	-	7329	30	full-splice_match	SHPRH	ENST00000275233.11	6649	30	2	-682	2	2	multi-exon	TRUE	canonical	1	15926	junction_29	25497.488105467688	NA	55	2	TRUE	NA	NA	NA	C	coding	1683	5052	398	5449	35.0	1	True	AATAAA	-17
PB.10265.3	chr6	-	2019	9	incomplete-splice_match	SHPRH	ENST00000367505.6	7201	30	-3	58823	-3	1930	3prime_fragment	FALSE	canonical	1	76965	junction_1	14343.321319846913	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1749	269	2017	70.0	52	False	AGTAAA	-27
PB.10265.4	chr6	-	1652	10	incomplete-splice_match	SHPRH	ENST00000367503.7	5237	25	65	26510	31	1930	3prime_fragment	FALSE	canonical	1	8566	junction_8	31923.37590791464	NA	2	NA	TRUE	NA	NA	NA	C	coding	472	1416	235	1650	70.0	-1	True	AGTAAA	-27
PB.10265.5	chr6	-	1900	9	incomplete-splice_match	SHPRH	ENST00000367505.6	7201	30	-30	58969	4	1784	3prime_fragment	FALSE	canonical	1	76965	junction_1	14343.321319846913	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1605	296	1900	60.0	3	True	ATTAAA	-42
PB.11280.8	chr8	-	4702	9	full-splice_match	RRM2B	ENST00000522368.5	1613	9	-22	-3067	0	-176	multi-exon	FALSE	canonical	1	28851	junction_8	84887.96741551478	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	354	1247	35.0	-1	True	AATACA	-18
PB.9232.7	chr5	-	7197	15	novel_in_catalog	IL6ST	novel	9057	17	NA	NA	-13	-1521	intron_retention	FALSE	canonical	1	2255	junction_10	311236.64555648004	NA	5	NA	TRUE	NA	NA	NA	C	coding	648	1947	815	2761	15.0	47	False	AATAAA	-17
PB.11280.4	chr8	-	4778	9	novel_in_catalog	RRM2B	novel	4931	9	NA	NA	116	-80	intron_retention	FALSE	canonical	1	4883	junction_8	92309.19677874735	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	334	1227	15.0	1127	False	AATAAA	-15
PB.11280.5	chr8	-	4538	8	full-splice_match	RRM2B	ENST00000395912.6	900	8	-85	-3553	-20	-78	multi-exon	FALSE	canonical	1	6116	junction_7	96819.63657592337	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	86	985	15.0	-23	True	AATAAA	-17
PB.9232.6	chr5	-	7411	16	novel_in_catalog	IL6ST	novel	9057	17	NA	NA	-25	-1520	intron_retention	FALSE	canonical	1	19876	junction_12	289856.43034773075	NA	2	NA	TRUE	NA	NA	NA	C	coding	617	1854	1121	2974	15.0	35	False	AATAAA	-18
PB.11280.1	chr8	-	4669	9	full-splice_match	RRM2B	ENST00000251810.7	4931	9	181	81	2	-81	multi-exon	FALSE	canonical	1	165153	junction_8	46010.58837648134	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	64	1119	20.0	-1	True	AATAAA	-14
PB.11280.3	chr8	-	4806	9	full-splice_match	RRM2B	ENST00000522368.5	1613	9	-22	-3171	0	-72	multi-exon	FALSE	canonical	1	28851	junction_8	84887.96741551478	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	354	1247	25.0	-1	True	AATAAA	-23
PB.9267.1	chr5	+	1344	12	full-splice_match	CDK7	ENST00000256443.7	1439	12	-11	106	1	-14	multi-exon	FALSE	canonical	1	115177	junction_6	144998.869171367	NA	0	NA	TRUE	NA	NA	NA	A	coding	346	1041	115	1155	45.0	7	True	AATAAA	-22
PB.289.5	chr1	+	3160	17	novel_in_catalog	MAP7D1	novel	959	6	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	1	199752	junction_6	553240.995525624	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	256	2571	15.0	-19	True	AATAAA	-14
PB.289.4	chr1	+	3271	18	full-splice_match	MAP7D1	ENST00000373150.8	3238	18	-35	2	-12	-2	multi-exon	FALSE	canonical	1	199752	junction_7	521114.2253599808	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	256	2682	15.0	-19	True	AATAAA	-14
PB.5285.1	chr17	-	1431	7	full-splice_match	TK1	ENST00000301634.11	1628	7	181	16	11	-16	multi-exon	FALSE	canonical	1	768707	junction_4	71260.53125834961	NA	0	NA	TRUE	NA	NA	NA	A	coding	234	705	59	763	15.0	-2	True	NA	NA
PB.8281.13	chr3	-	2458	14	incomplete-splice_match	CBLB	ENST00000646825.1	3669	20	-1	26791	-1	-4214	3prime_fragment	FALSE	canonical	1	65035	junction_13	40128.034392886555	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	144	2348	20.0	2	True	ATTAAA	-21
PB.289.3	chr1	+	3135	17	novel_in_catalog	MAP7D1	novel	959	6	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	30150	junction_9	582738.778568802	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	258	2546	15.0	-21	True	AATAAA	-14
PB.289.2	chr1	+	3265	16	full-splice_match	MAP7D1	ENST00000316156.8	3456	16	189	2	-21	-2	multi-exon	FALSE	canonical	1	219537	junction_5	525134.4657422262	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	265	2676	15.0	-28	True	AATAAA	-14
PB.6401.7	chr2	+	2218	16	full-splice_match	SPAST	ENST00000642455.1	2107	16	133	-244	-1	55	multi-exon	FALSE	canonical	1	27512	junction_3	57726.66660214806	NA	4	NA	TRUE	NA	NA	NA	C	coding	497	1494	130	1623	25.0	-31	True	CATAAA	-13
PB.306.1	chr1	-	2415	7	full-splice_match	RRAGC	ENST00000373001.3	2732	7	313	4	313	-4	multi-exon	FALSE	canonical	1	283923	junction_6	43389.093443962265	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	63	1064	25.0	4528	False	AATAAA	-13
PB.28.3	chr1	-	5415	10	novel_not_in_catalog	SLC35E2B	novel	2156	7	NA	NA	-64	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	132185.17090229574	NA	4	1	TRUE	NA	NA	NA	C	coding	405	1218	492	1709	5.0	-6322	False	AATAAA	-13
PB.4921.5	chr17	+	1892	12	novel_not_in_catalog	GGNBP2	novel	2847	14	NA	NA	5	-13	any annotated donor/acceptor	TRUE	canonical	1	132	junction_7	278994.598127243	NA	4	NA	TRUE	NA	NA	NA	C	coding	202	606	1285	1890	80.0	4	True	NA	NA
PB.4921.4	chr17	+	2410	14	full-splice_match	GGNBP2	ENST00000613102.4	2847	14	36	401	5	-130	multi-exon	FALSE	canonical	1	187345	junction_1	211969.28260358688	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	281	2374	20.0	4	True	AATAAA	-32
PB.4921.7	chr17	+	1764	12	novel_not_in_catalog	GGNBP2	novel	2847	14	NA	NA	97	-13	any annotated donor/acceptor	FALSE	canonical	1	187345	junction_1	241687.35846499115	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1587	176	1762	80.0	-592	False	NA	NA
PB.4921.6	chr17	+	1799	12	incomplete-splice_match	GGNBP2	ENST00000613102.4	2847	14	100	3708	56	-13	3prime_fragment	FALSE	canonical	1	187345	junction_1	227636.34478082263	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	217	1797	80.0	-633	False	NA	NA
PB.4921.1	chr17	+	2825	14	full-splice_match	GGNBP2	ENST00000613102.4	2847	14	18	4	-6	-4	multi-exon	TRUE	canonical	1	187345	junction_1	211969.28260358688	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	299	2392	30.0	-14	True	AATAAA	-24
PB.11095.1	chr8	-	4000	10	full-splice_match	NSD3	ENST00000316985.7	3995	10	-7	2	-7	-2	multi-exon	FALSE	canonical	1	104742	junction_1	95674.71504936808	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	559	2463	15.0	4066	False	AATAAA	-39
PB.4921.3	chr17	+	2320	2	full-splice_match	GGNBP2	ENST00000611219.1	2315	2	7	-12	0	12	multi-exon	FALSE	canonical	1	187345	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	AATAAA	-29
PB.4921.2	chr17	+	1435	9	incomplete-splice_match	GGNBP2	ENST00000618837.4	2346	10	-22	4694	-2	-1013	3prime_fragment	FALSE	canonical	1	187345	junction_1	185377.8124880628	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1140	295	1434	40.0	-10	True	AATAGA	-2
PB.4921.9	chr17	+	1698	11	incomplete-splice_match	GGNBP2	ENST00000613102.4	2847	14	725	3705	109	-10	internal_fragment	FALSE	canonical	1	336458	junction_6	193480.83361100653	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1584	113	1696	75.0	-8	True	NA	NA
PB.4921.8	chr17	+	2771	13	novel_not_in_catalog	GGNBP2	novel	2847	14	NA	NA	-17	-4	any annotated donor/acceptor	FALSE	canonical	1	224369	junction_6	196542.71717725045	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	239	2338	30.0	-134	False	AATAAA	-24
PB.10445.2	chr7	-	2341	10	novel_in_catalog	C7orf31	novel	3357	10	NA	NA	16	-7	combination_of_known_junctions	FALSE	canonical	1	21629	junction_9	21906.642640481856	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	339	2111	45.0	27	True	NA	NA
PB.10445.3	chr7	-	2340	9	novel_in_catalog	C7orf31	novel	3357	10	NA	NA	-13	-7	no_combination_of_known_junctions	FALSE	canonical	1	877	junction_5	28565.992565187982	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	368	2110	45.0	-2	True	NA	NA
PB.11889.7	chr9	-	1644	9	incomplete-splice_match	BRD3	ENST00000303407.11	5652	12	-4	9918	-4	-4195	3prime_fragment	FALSE	canonical	1	108094	junction_8	43958.33894439143	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1452	191	1642	70.0	4	True	NA	NA
PB.8989.1	chr4	+	2667	1	antisense	novelGene_ELF2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6401.8	chr2	+	4784	16	novel_in_catalog	SPAST	novel	5277	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10549	junction_14	50655.150498071	NA	3	NA	TRUE	NA	NA	NA	C	coding	465	1398	123	1520	15.0	-24	True	AATAAA	-12
PB.3992.10	chr15	-	4979	21	full-splice_match	SIN3A	ENST00000394947.7	6737	21	3	1755	3	-4	multi-exon	FALSE	canonical	1	115879	junction_20	91350.95951629353	NA	0	NA	TRUE	NA	NA	NA	C	coding	1273	3822	313	4134	20.0	-12	True	ATTAAA	-25
PB.3992.11	chr15	-	4734	21	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	1	11928	junction_20	105242.55364699205	NA	0	NA	TRUE	NA	NA	NA	C	coding	1273	3822	67	3888	15.0	-6	True	ATTAAA	-26
PB.3992.12	chr15	-	4821	22	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	1	2293	junction_21	122335.77855016055	NA	6	NA	TRUE	NA	NA	NA	C	coding	1273	3822	156	3977	20.0	3	True	ATTAAA	-24
PB.3992.13	chr15	-	4611	21	full-splice_match	SIN3A	ENST00000394947.7	6737	21	13	2113	13	-362	multi-exon	FALSE	canonical	1	115879	junction_20	91350.95951629353	NA	2	NA	TRUE	NA	NA	NA	C	coding	1273	3822	303	4124	10.0	-2	True	AAAAAG	-9
PB.3992.14	chr15	-	3490	20	novel_in_catalog	SIN3A	novel	6737	21	NA	NA	0	-87	combination_of_known_junctions	FALSE	canonical	1	11928	junction_19	101339.17088698201	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3429	62	3490	50.0	-1	True	NA	NA
PB.3992.15	chr15	-	3685	17	incomplete-splice_match	SIN3A	ENST00000394947.7	6737	21	19	14691	19	-62	3prime_fragment	FALSE	canonical	1	115879	junction_16	65874.77755465289	NA	3	1	TRUE	NA	NA	NA	C	coding	1082	3249	297	3545	80.0	4	True	NA	NA
PB.11180.6	chr8	+	2874	4	incomplete-splice_match	MSC-AS1	ENST00000522519.5	1537	5	1101	-1914	66	-1351	5prime_fragment	FALSE	canonical	1	34369	junction_3	11787.496661953102	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-97	False	AATAAA	-21
PB.334.1	chr1	-	3559	18	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	10	-1	intron_retention	FALSE	canonical	1	55030	junction_13	99622.49193123126	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	586	2568	25.0	-7	True	AATAAA	-14
PB.334.2	chr1	-	3416	17	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	-56	-1	intron_retention	FALSE	canonical	1	11067	junction_13	103126.70434650326	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	443	2425	25.0	6	True	AATAAA	-14
PB.9924.29	chr6	-	2536	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-31	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	337687.29984030715	NA	3	NA	TRUE	NA	NA	NA	C	coding	448	1347	40	1386	30.0	-12	True	AATAAA	-20
PB.8973.8	chr4	-	5849	5	novel_not_in_catalog	ANKRD50	novel	8794	5	NA	NA	571	358	any annotated donor/acceptor	FALSE	canonical	1	386	junction_4	49177.717449064265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1429	4290	1043	5332	35.0	570	False	AATAAA	-30
PB.334.5	chr1	-	3590	18	novel_not_in_catalog	SCMH1	novel	2977	13	NA	NA	-4	-19	intron_retention	TRUE	canonical	0	0	junction_16	117530.23022590834	NA	1	1	TRUE	NA	NA	NA	C	coding	660	1983	637	2619	65.0	17	True	NA	NA
PB.334.6	chr1	-	3245	15	full-splice_match	SCMH1	ENST00000372597.5	3252	15	-14	21	-14	-19	multi-exon	FALSE	canonical	1	22020	junction_10	109765.55021575926	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	499	2274	65.0	7	True	NA	NA
PB.334.7	chr1	-	2981	18	novel_in_catalog	SCMH1	novel	2977	13	NA	NA	-5	434	combination_of_known_junctions	FALSE	canonical	1	55030	junction_13	99622.49193123126	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	563	2545	45.0	16	True	NA	NA
PB.9087.7	chr4	-	2877	1	novel_in_catalog	LINC02363	novel	2153	3	NA	NA	18	-9393	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.9087.6	chr4	-	3277	1	novel_in_catalog	LINC02363	novel	2153	3	NA	NA	-1768	-4714	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	66	201	127	327	70.0	5675	False	NA	NA
PB.9087.5	chr4	-	3978	3	novel_not_in_catalog	LINC02363	novel	2153	3	NA	NA	465	-4714	any annotated donor/acceptor	FALSE	canonical	1	19078	junction_2	978.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	3	320	70.0	-1	True	NA	NA
PB.9087.4	chr4	-	4029	3	novel_not_in_catalog	LINC02363	novel	2153	3	NA	NA	456	-4714	any annotated donor/acceptor	FALSE	canonical	1	2339	junction_2	9348.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-10	True	NA	NA
PB.9087.3	chr4	-	4653	2	incomplete-splice_match	LINC02363	ENST00000317596.3	2153	3	-113	5648	-113	-4714	3prime_fragment	FALSE	canonical	1	19078	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	150	453	882	1334	70.0	1265	False	NA	NA
PB.9087.2	chr4	-	3488	6	novel_not_in_catalog	LINC02363	novel	2153	3	NA	NA	-41	232	any annotated donor/acceptor	FALSE	canonical	1	854	junction_3	7585.489173415252	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	482	826	25.0	1337	False	NA	NA
PB.7482.10	chr21	-	1477	13	incomplete-splice_match	CCT8	ENST00000286788.8	2005	15	151	4957	-7	847	3prime_fragment	FALSE	canonical	1	354074	junction_9	533209.6525278868	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1419	57	1475	50.0	-17	True	AATGAA	-36
PB.6010.11	chr19	-	2536	9	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	6182	junction_3	41566.618239392235	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	698	1948	15.0	-57	True	AATAAA	-12
PB.9352.2	chr5	+	2551	12	full-splice_match	RHOBTB3	ENST00000379982.7	5537	12	132	2854	132	17	multi-exon	FALSE	canonical	1	368617	junction_1	57699.64238799474	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	377	2212	40.0	-3	True	ATTAAA	-27
PB.9352.3	chr5	+	3756	12	full-splice_match	RHOBTB3	ENST00000379982.7	5537	12	142	1639	142	396	multi-exon	FALSE	canonical	1	368617	junction_1	57699.64238799474	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	367	2202	45.0	7	True	AATACA	-21
PB.9352.1	chr5	+	4111	12	full-splice_match	RHOBTB3	ENST00000379982.7	5537	12	161	1265	161	770	multi-exon	FALSE	canonical	1	368617	junction_1	57699.64238799474	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	348	2183	90.0	0	True	NA	NA
PB.7876.1	chr22	+	2465	9	novel_in_catalog	CRELD2	novel	963	7	NA	NA	2	1	intron_retention	FALSE	canonical	1	390567	junction_1	121444.26010925496	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	134	988	15.0	3	True	AATAAA	-26
PB.6010.12	chr19	-	2340	7	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	16	-1	intron_retention	FALSE	canonical	1	5469	junction_1	38030.40073743636	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	674	1729	15.0	-33	True	AATAAA	-12
PB.6210.18	chr19	+	3194	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-22	206	combination_of_known_junctions	FALSE	canonical	1	10540	junction_11	41886.513321062615	NA	0	NA	TRUE	NA	NA	NA	B	coding	652	1959	380	2338	70.0	0	True	NA	NA
PB.7876.2	chr22	+	1405	10	full-splice_match	CRELD2	ENST00000328268.8	1357	10	-40	-8	21	2	multi-exon	FALSE	canonical	1	390567	junction_1	117195.64567670698	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	115	1176	15.0	22	True	AATAAA	-27
PB.6210.16	chr19	+	3060	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-24	0	any annotated donor/acceptor	FALSE	canonical	1	2282	junction_2	45990.95480557986	NA	0	NA	TRUE	NA	NA	NA	B	coding	651	1956	455	2410	95.0	-2	True	NA	NA
PB.6210.17	chr19	+	3506	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-22	494	any annotated donor/acceptor	FALSE	canonical	1	617	junction_7	46287.213128273586	NA	0	NA	TRUE	NA	NA	NA	B	coding	660	1983	380	2362	20.0	0	True	NA	NA
PB.6210.14	chr19	+	2861	15	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-27	-3	no_combination_of_known_junctions	FALSE	canonical	1	1006	junction_10	45278.304482570085	NA	2	1	TRUE	NA	NA	NA	B	coding	609	1830	385	2214	90.0	-5	True	NA	NA
PB.6010.13	chr19	-	2475	9	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	3240	junction_3	42123.84276581821	NA	13	NA	TRUE	NA	NA	NA	C	coding	311	936	700	1635	20.0	-59	True	AATAAA	-11
PB.6210.12	chr19	+	3877	15	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-27	0	intron_retention	FALSE	canonical	1	10540	junction_11	42998.838844787424	NA	12	1	TRUE	NA	NA	NA	B	coding	641	1926	385	2310	95.0	-5	True	NA	NA
PB.6210.13	chr19	+	2958	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-27	0	any annotated donor/acceptor	FALSE	canonical	1	6209	junction_7	45860.76832975605	NA	0	NA	TRUE	NA	NA	NA	B	coding	351	1056	385	1440	95.0	-5	True	NA	NA
PB.6210.10	chr19	+	2542	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-29	2	combination_of_known_junctions	FALSE	canonical	1	10540	junction_11	41618.06168907384	NA	1	NA	TRUE	NA	NA	NA	B	coding	651	1956	387	2342	50.0	-7	True	NA	NA
PB.1778.1	chr11	-	2754	4	novel_not_in_catalog	AC104389.4	novel	1761	8	NA	NA	0	313	any annotated donor/acceptor	FALSE	canonical	1	1092	junction_2	1803.9246103981175	NA	9	NA	TRUE	NA	NA	NA	B	coding	126	381	1117	1497	85.0	-35	True	TATAAA	-41
PB.8334.9	chr3	-	4089	11	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	-1	721	combination_of_known_junctions	FALSE	canonical	1	10282	junction_6	68920.96426088364	NA	0	NA	TRUE	NA	NA	NA	C	coding	1325	3975	113	4087	60.0	-1	True	NA	NA
PB.8334.8	chr3	-	4210	12	full-splice_match	GOLGB1	ENST00000494517.5	4959	12	-75	824	-1	725	multi-exon	FALSE	canonical	1	48981	junction_6	56187.94446298251	NA	0	NA	TRUE	NA	NA	NA	C	coding	1366	4098	113	4210	55.0	-1	True	NA	NA
PB.811.2	chr1	-	2506	6	full-splice_match	RIT1	ENST00000368323.7	3445	6	0	939	0	-939	multi-exon	FALSE	canonical	1	224149	junction_5	83095.88845087342	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	206	865	35.0	-33	True	AATAAA	-34
PB.8271.2	chr3	+	1455	5	full-splice_match	PCNP	ENST00000265260.7	2342	5	77	810	-14	376	multi-exon	FALSE	canonical	1	221699	junction_2	233417.51706906554	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	45	581	70.0	-8	True	TATAAA	-2
PB.5291.8	chr17	-	4602	21	novel_not_in_catalog	USP36	novel	607	4	NA	NA	-1	-6	intron_retention	FALSE	canonical	0	0	junction_10	88322.5716566694	NA	20	1	TRUE	NA	NA	NA	C	coding	1121	3366	226	3591	35.0	17	True	AATAAA	-15
PB.5291.9	chr17	-	3549	19	incomplete-splice_match	USP36	ENST00000312010.10	5234	20	18	2023	3	-2023	3prime_fragment	FALSE	canonical	1	127073	junction_18	60157.98564048657	NA	3	NA	TRUE	NA	NA	NA	C	coding	1080	3240	308	3547	25.0	569	False	NA	NA
PB.5291.4	chr17	-	5894	21	novel_in_catalog	USP36	novel	607	4	NA	NA	-28	0	intron_retention	FALSE	canonical	1	125988	junction_1	68004.82716315071	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	253	3624	5.0	-10	True	AATAAA	-17
PB.8271.5	chr3	+	2597	6	novel_not_in_catalog	PCNP	novel	2342	5	NA	NA	-6	-4	any annotated donor/acceptor	FALSE	canonical	1	1128	junction_2	170277.26683453665	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-11
PB.5291.6	chr17	-	6359	20	full-splice_match	USP36	ENST00000312010.10	5234	20	104	-1229	-2	-1	multi-exon	FALSE	canonical	1	127073	junction_19	61465.63301399925	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	222	3593	5.0	21	True	AATAAA	-16
PB.5291.7	chr17	-	4603	21	novel_in_catalog	USP36	novel	607	4	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	112114	junction_1	69486.74444482199	NA	9	1	TRUE	NA	NA	NA	C	coding	1123	3372	221	3592	35.0	22	True	AATAAA	-15
PB.8334.5	chr3	-	4336	12	full-splice_match	GOLGB1	ENST00000494517.5	4959	12	-11	634	-11	-634	multi-exon	FALSE	canonical	1	48981	junction_6	56187.94446298251	NA	2	NA	TRUE	NA	NA	NA	C	coding	1429	4287	49	4335	55.0	288	False	GATAAA	-33
PB.8334.4	chr3	-	4522	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	0	32909	0	-634	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	2	NA	TRUE	NA	NA	NA	C	coding	1470	4410	112	4521	55.0	0	True	GATAAA	-33
PB.5291.2	chr17	-	3810	21	novel_not_in_catalog	USP36	novel	607	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	18248	junction_5	96739.55381304743	NA	1	NA	TRUE	NA	NA	NA	C	coding	1124	3375	224	3598	20.0	19	True	NA	NA
PB.5291.3	chr17	-	5888	21	novel_in_catalog	USP36	novel	607	4	NA	NA	35	1	intron_retention	FALSE	canonical	1	112114	junction_1	69486.74444482199	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	268	3639	0.0	-25	True	AATAAA	-19
PB.11089.3	chr8	+	2543	16	full-splice_match	ASH2L	ENST00000343823.10	3090	16	291	256	-17	6	multi-exon	FALSE	canonical	1	295807	junction_1	85541.59483900215	NA	19	2	TRUE	NA	NA	NA	C	coding	628	1887	19	1905	15.0	4	True	AATAAA	-24
PB.11089.2	chr8	+	2455	15	novel_in_catalog	ASH2L	novel	3090	16	NA	NA	20	4	combination_of_known_junctions	FALSE	canonical	1	24904	junction_13	137330.7279861619	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	32	1819	20.0	-9	True	AATAAA	-22
PB.11089.1	chr8	+	1787	3	incomplete-splice_match	ASH2L	ENST00000343823.10	3090	16	274	31448	16	-2294	3prime_fragment	FALSE	canonical	1	295807	junction_1	125013.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	36	440	65.0	-13	True	NA	NA
PB.10940.8	chr7	+	2868	14	novel_not_in_catalog	GALNT11	novel	580	3	NA	NA	4	-5	any annotated donor/acceptor	FALSE	canonical	1	1851	junction_2	135547.18302800838	NA	4	NA	TRUE	NA	NA	NA	C	coding	608	1827	377	2203	20.0	-61	True	AATAAA	-18
PB.10940.9	chr7	+	2665	12	full-splice_match	GALNT11	ENST00000430044.6	2727	12	57	5	8	-5	multi-exon	FALSE	canonical	1	145116	junction_1	68486.43463616392	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	174	2000	20.0	-29	True	AATAAA	-18
PB.11089.5	chr8	+	2474	16	full-splice_match	ASH2L	ENST00000428278.6	2678	16	206	-2	60	2	multi-exon	FALSE	canonical	1	117450	junction_1	113915.57094554233	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	236	1840	15.0	0	True	AATAAA	-20
PB.11089.4	chr8	+	3187	16	full-splice_match	ASH2L	ENST00000343823.10	3090	16	288	-385	-20	270	multi-exon	FALSE	canonical	1	295807	junction_1	85541.59483900215	NA	20	2	TRUE	NA	NA	NA	C	coding	628	1887	22	1908	100.0	1	True	NA	NA
PB.10940.4	chr7	+	2857	13	novel_in_catalog	GALNT11	novel	580	3	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	6999	junction_8	118420.65756551937	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	230	1504	20.0	-85	True	AATAAA	-19
PB.10940.5	chr7	+	2653	13	novel_in_catalog	GALNT11	novel	580	3	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	17400	junction_1	118668.43239767778	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	344	2170	75.0	-77	True	NA	NA
PB.10940.6	chr7	+	2837	13	novel_in_catalog	GALNT11	novel	580	3	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	14200	junction_1	118261.0821758778	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	342	2168	15.0	-75	True	AATAAA	-22
PB.10940.7	chr7	+	2565	13	novel_not_in_catalog	GALNT11	novel	580	3	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	4062	junction_1	120069.62207295839	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	256	2082	75.0	-62	True	NA	NA
PB.10940.1	chr7	+	2574	12	full-splice_match	GALNT11	ENST00000430044.6	2727	12	-34	187	-15	0	multi-exon	FALSE	canonical	1	145116	junction_1	68486.43463616392	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	265	2091	75.0	-120	True	NA	NA
PB.2038.2	chr11	-	2523	6	full-splice_match	CDCA5	ENST00000275517.7	2587	6	63	1	-41	-1	multi-exon	FALSE	canonical	1	246381	junction_5	81554.67924920065	NA	1	NA	TRUE	NA	NA	NA	A	coding	252	759	111	869	10.0	-49	True	ATTAAA	-18
PB.7734.1	chr22	+	2269	14	novel_in_catalog	TOM1	novel	553	5	NA	NA	-19	3	intron_retention	TRUE	canonical	1	17471	junction_2	123675.2080986189	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	470	1492	20.0	-57	True	ATTAAA	-26
PB.3060.1	chr13	+	2939	3	intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1392	junction_1	147.5	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-135	False	NA	NA
PB.11478.9	chr9	+	5782	44	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	291	0	combination_of_known_junctions	FALSE	canonical	1	36496	junction_1	53315.20642197946	NA	11	1	TRUE	NA	NA	NA	B	coding	1801	5406	58	5463	15.0	10	True	AGTAAA	-12
PB.11478.8	chr9	+	4364	1	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	285	-31795	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	145	438	1	438	65.0	4	True	NA	NA
PB.2399.4	chr12	-	2548	1	novel_in_catalog	PARP11	novel	2428	10	NA	NA	10565	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-18	False	ATTAAA	-17
PB.11478.6	chr9	+	5681	43	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	281	-2	no_combination_of_known_junctions	FALSE	canonical	1	4792	junction_36	61975.056318986084	NA	0	NA	TRUE	NA	NA	NA	B	coding	1439	4320	68	4387	5.0	0	True	AGTAAA	-17
PB.11478.5	chr9	+	3398	19	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	281	6	combination_of_known_junctions	FALSE	canonical	1	36496	junction_1	47235.52519614401	NA	1	NA	TRUE	NA	NA	NA	B	coding	801	2406	68	2473	25.0	0	True	ATTAAA	-18
PB.11478.4	chr9	+	5696	43	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	279	0	combination_of_known_junctions	FALSE	canonical	1	6837	junction_11	60533.77012254757	NA	0	NA	TRUE	NA	NA	NA	B	coding	1766	5301	70	5370	10.0	-2	True	AGTAAA	-19
PB.1297.2	chr10	-	3050	9	novel_not_in_catalog	NUDT5	novel	3433	10	NA	NA	-14	-141	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	374274.755014594	NA	2	1	TRUE	NA	NA	NA	B	coding	164	495	156	650	20.0	7	True	ATTAAA	-35
PB.2399.1	chr12	-	4454	8	full-splice_match	PARP11	ENST00000427057.6	4406	8	-47	-1	-28	1	multi-exon	FALSE	canonical	1	37985	junction_7	21627.09984425719	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	418	1191	15.0	-5	True	ATTAAA	-19
PB.2399.2	chr12	-	4603	9	novel_in_catalog	PARP11	novel	2428	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	37985	junction_8	20859.360365537937	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	346	1341	10.0	7892	False	ATTAAA	-18
PB.1297.1	chr10	-	3167	9	novel_not_in_catalog	NUDT5	novel	3433	10	NA	NA	-3	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	374274.755014594	NA	1	1	TRUE	NA	NA	NA	B	coding	164	495	136	630	15.0	27	True	AATAAA	-22
PB.8092.4	chr3	-	3681	15	full-splice_match	PFKFB4	ENST00000490115.5	1757	15	57	-1981	24	-9	multi-exon	FALSE	canonical	1	18338	junction_12	69143.18323875287	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	791	1627	45.0	9371	False	AATAAA	-9
PB.10224.19	chr6	-	2629	1	novel_in_catalog	HBS1L	novel	7163	18	NA	NA	-7602	3687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	107	324	199	522	65.0	NA	False	TATAAA	-2
PB.10224.18	chr6	-	2324	18	full-splice_match	HBS1L	ENST00000367837.9	7163	18	80	4759	1	12	multi-exon	FALSE	canonical	1	307314	junction_15	91043.00295143622	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	128	2182	55.0	0	True	ATTAAA	-16
PB.8128.18	chr3	+	2946	23	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22548	18912	no_combination_of_known_junctions	FALSE	canonical	1	64793	junction_7	352668.569708328	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1627	2445	15.0	-14	True	AAGAAA	-10
PB.10224.15	chr6	-	2734	18	full-splice_match	HBS1L	ENST00000367837.9	7163	18	45	4384	-1	80	multi-exon	FALSE	canonical	1	307314	junction_15	91043.00295143622	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	163	2217	35.0	2	True	AATAAA	-20
PB.8128.17	chr3	+	3171	24	novel_in_catalog	RBM6	novel	2342	21	NA	NA	22547	18912	intron_retention	FALSE	canonical	1	263723	junction_6	256956.39909226086	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	145	2367	15.0	-15	True	AAGAAA	-10
PB.10224.17	chr6	-	2372	17	novel_in_catalog	HBS1L	novel	7163	18	NA	NA	1	126	combination_of_known_junctions	FALSE	canonical	1	3569	junction_16	147425.26612256325	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	128	2116	35.0	0	True	AATAAA	-16
PB.10224.16	chr6	-	2440	18	full-splice_match	HBS1L	ENST00000367837.9	7163	18	77	4646	-2	125	multi-exon	FALSE	canonical	1	307314	junction_15	91043.00295143622	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	131	2185	30.0	-3	True	AATAAA	-15
PB.8128.12	chr3	+	2291	2	incomplete-splice_match	RBM5	ENST00000492472.1	902	4	-56	1769	0	-1290	intron_retention	FALSE	canonical	1	485787	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-35	True	NA	NA
PB.10224.10	chr6	-	2481	16	novel_not_in_catalog	HBS1L	novel	7163	18	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	145760.1910398797	NA	19	1	TRUE	NA	NA	NA	C	coding	556	1671	165	1835	30.0	0	True	AATAAA	-19
PB.10224.13	chr6	-	2800	18	novel_not_in_catalog	HBS1L	novel	7163	18	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	142246.64929198104	NA	7	1	TRUE	NA	NA	NA	C	coding	674	2025	132	2156	35.0	-4	True	AATAAA	-17
PB.10224.12	chr6	-	2723	17	novel_in_catalog	HBS1L	novel	7163	18	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	24733	junction_2	148939.69385174775	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	125	1933	30.0	3	True	AATAAA	-18
PB.3047.1	chr13	-	5594	8	full-splice_match	LATS2	ENST00000382592.4	5511	8	-90	7	-90	-7	multi-exon	FALSE	canonical	1	54638	junction_7	42783.7953249611	NA	3	NA	TRUE	NA	NA	NA	C	coding	1088	3267	497	3763	25.0	-89	False	ATTAAA	-12
PB.3047.2	chr13	-	4156	8	full-splice_match	LATS2	ENST00000382592.4	5511	8	-51	1406	-51	-1406	multi-exon	FALSE	canonical	1	54638	junction_7	42783.7953249611	NA	1	NA	TRUE	NA	NA	NA	C	coding	1088	3267	458	3724	80.0	-50	True	CATAAA	-40
PB.1131.11	chr1	+	2316	13	novel_not_in_catalog	IARS2	novel	3560	23	NA	NA	-1430	-7	any annotated donor/acceptor	FALSE	canonical	1	3079	junction_1	280979.4751938075	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	406	1917	40.0	NA	False	AATAAA	-11
PB.8038.8	chr3	+	2707	16	full-splice_match	CTNNB1	ENST00000396183.7	3268	16	71	490	0	-1	multi-exon	FALSE	canonical	1	945315	junction_15	596681.5845104434	NA	1	NA	TRUE	NA	NA	NA	C	coding	781	2346	215	2560	15.0	0	True	NA	NA
PB.8038.9	chr3	+	3264	16	full-splice_match	CTNNB1	ENST00000396185.8	3472	16	209	-1	-5	1	multi-exon	FALSE	canonical	1	823716	junction_15	616922.6309788718	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	122	2467	10.0	-4510	False	ATTAAA	-16
PB.8038.6	chr3	+	3452	15	full-splice_match	CTNNB1	ENST00000349496.10	3947	15	241	254	0	228	multi-exon	FALSE	canonical	1	1458507	junction_1	467647.9068772123	NA	3	NA	TRUE	NA	NA	NA	C	coding	781	2346	250	2595	25.0	-9	True	TATAAA	-21
PB.8038.7	chr3	+	3130	16	full-splice_match	CTNNB1	ENST00000396185.8	3472	16	84	258	1	214	multi-exon	FALSE	canonical	1	823716	junction_15	616922.6309788718	NA	3	NA	TRUE	NA	NA	NA	C	coding	781	2346	247	2592	50.0	-6	True	AATAAA	-38
PB.8038.4	chr3	+	3218	15	full-splice_match	CTNNB1	ENST00000349496.10	3947	15	213	516	0	-2	multi-exon	FALSE	canonical	1	1458507	junction_1	467647.9068772123	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	278	2623	35.0	-4666	False	NA	NA
PB.12302.1	chrX	+	3301	1	intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.8038.2	chr3	+	3123	17	novel_not_in_catalog	CTNNB1	novel	3278	16	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_1	819944.9645496794	NA	5	1	TRUE	NA	NA	NA	C	coding	781	2346	141	2486	10.0	-5412	False	ATTAAA	-15
PB.8038.3	chr3	+	3015	16	full-splice_match	CTNNB1	ENST00000396183.7	3268	16	-14	267	1	205	multi-exon	FALSE	canonical	1	945315	junction_15	596681.5845104434	NA	4	NA	TRUE	NA	NA	NA	C	coding	781	2346	300	2645	70.0	-4688	False	AATAAA	-29
PB.8038.1	chr3	+	3286	16	full-splice_match	CTNNB1	ENST00000431914.6	2749	16	8	-545	8	1	multi-exon	FALSE	canonical	1	2922	junction_1	833239.027538613	NA	6	1	TRUE	NA	NA	NA	C	coding	781	2346	144	2489	10.0	-5421	False	ATTAAA	-16
PB.11251.2	chr8	-	1448	8	full-splice_match	MTERF3	ENST00000287025.3	1409	8	-20	-19	1	8	multi-exon	FALSE	canonical	1	166696	junction_7	56833.31471909046	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	120	1373	20.0	-2	True	AATAAA	-22
PB.255.2	chr1	+	1308	11	full-splice_match	EIF3I	ENST00000373586.1	1458	11	37	113	0	-113	multi-exon	FALSE	canonical	1	1873792	junction_1	997895.3348583408	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	36	1013	80.0	0	True	NA	NA
PB.3711.1	chr14	-	1570	5	novel_not_in_catalog	IGHE	novel	1485	6	NA	NA	-3467	0	any annotated donor/acceptor	FALSE	canonical	1	7149	junction_4	46801.72025417442	NA	0	NA	TRUE	NA	NA	NA	A	coding	389	1170	276	1445	25.0	-22	False	AATAAA	-15
PB.805.5	chr1	-	2252	3	novel_in_catalog	ASH1L	novel	11942	28	NA	NA	2	667	no_combination_of_known_junctions	FALSE	canonical	1	17656	junction_2	95134.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	708	2124	127	2250	80.0	-4	True	NA	NA
PB.255.3	chr1	+	1406	11	full-splice_match	EIF3I	ENST00000373586.1	1458	11	51	1	14	-1	multi-exon	FALSE	canonical	1	1873792	junction_1	997895.3348583408	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	22	999	10.0	0	True	AATAAA	-33
PB.2686.15	chr12	-	3090	7	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	6266525	junction_6	2121419.1828459827	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	22	900	20.0	-1	True	AATAAA	-14
PB.2686.17	chr12	-	1631	10	novel_not_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	3567039.944806213	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	330	1487	20.0	-1	True	AATAAA	-14
PB.2686.16	chr12	-	2418	8	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	6266525	junction_7	1966540.1426364246	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	22	900	20.0	-1	True	AATAAA	-14
PB.2686.11	chr12	-	1542	9	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	70109	junction_2	3597574.881768201	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	22	1398	20.0	-1	True	AATAAA	-14
PB.2686.10	chr12	-	1583	9	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	81301	junction_8	3631399.964812794	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	33	1439	20.0	-12	False	AATAAA	-14
PB.2686.13	chr12	-	3348	6	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-9	0	intron_retention	FALSE	canonical	1	6266525	junction_5	2315723.005309452	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	31	732	20.0	-10	True	AATAAA	-14
PB.2686.12	chr12	-	3800	5	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	-12	0	intron_retention	FALSE	canonical	1	10251057	junction_3	727056.5057237642	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	1068	1610	20.0	-13	False	AATAAA	-14
PB.4743.7	chr17	+	1847	12	novel_not_in_catalog	SENP3-EIF4A1	novel	3519	21	NA	NA	9539	291	any annotated donor/acceptor	FALSE	canonical	1	12550	junction_4	1608456.9087306133	NA	1	NA	TRUE	NA	NA	NA	B	coding	286	861	467	1327	5.0	0	True	AATAAA	-18
PB.4743.6	chr17	+	1757	11	full-splice_match	EIF4A1	ENST00000293831.12	1756	11	0	-1	0	1	multi-exon	FALSE	canonical	1	817094	junction_2	1537274.9230806963	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	17	1237	5.0	0	True	AATAAA	-18
PB.4743.5	chr17	+	2118	10	novel_in_catalog	SENP3-EIF4A1	novel	3519	21	NA	NA	9539	289	intron_retention	FALSE	canonical	1	817094	junction_2	1604758.8265653371	NA	0	NA	TRUE	NA	NA	NA	B	coding	229	690	911	1600	5.0	0	True	AATAAA	-16
PB.4743.4	chr17	+	3021	10	novel_in_catalog	SENP3-EIF4A1	novel	3519	21	NA	NA	9539	290	intron_retention	FALSE	canonical	1	817094	junction_2	1514997.8348852962	NA	1	NA	TRUE	NA	NA	NA	B	coding	286	861	1642	2502	5.0	0	True	AATAAA	-17
PB.2686.19	chr12	-	1752	10	full-splice_match	ATP5F1B	ENST00000262030.7	1839	10	84	3	0	-3	multi-exon	FALSE	canonical	1	6266525	junction_9	1837614.5903652806	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	22	1611	20.0	-1	True	AATAAA	-11
PB.2686.18	chr12	-	3112	6	novel_in_catalog	ATP5F1B	novel	449	3	NA	NA	3	-1	intron_retention	FALSE	canonical	1	10136093	junction_2	790165.0576244434	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	2394	2969	20.0	2	True	AATAAA	-13
PB.4743.1	chr17	+	1374	11	full-splice_match	EIF4A1	ENST00000293831.12	1756	11	0	382	0	-7	multi-exon	FALSE	canonical	1	817094	junction_2	1537274.9230806963	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	17	1237	55.0	0	True	AATAAA	-17
PB.10351.7	chr7	+	2026	5	incomplete-splice_match	DNAAF5	ENST00000403952.3	1907	6	119	5134	119	926	3prime_fragment	FALSE	canonical	1	12379	junction_1	163637.68912829953	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	555	1331	25.0	NA	False	AATAAA	-19
PB.1055.10	chr1	-	4680	1	genic	PPP1R15B	novel	NA	NA	NA	NA	-54	-3779	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	652	1959	435	2393	65.0	1	True	TTTAAA	-13
PB.8103.1	chr3	+	2588	5	full-splice_match	NDUFAF3	ENST00000326925.10	2012	5	1111	-1687	1	1687	multi-exon	FALSE	canonical	1	1174091	junction_1	303746.9493249068	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	195	578	40.0	1	True	NA	NA
PB.8103.2	chr3	+	1745	5	full-splice_match	NDUFAF3	ENST00000326925.10	2012	5	1120	-853	10	853	multi-exon	FALSE	canonical	1	1174091	junction_1	303746.9493249068	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	186	569	55.0	10	True	NA	NA
PB.11676.2	chr9	-	1528	5	full-splice_match	TRMO	ENST00000375119.7	1647	5	45	74	-9	-11	multi-exon	FALSE	canonical	1	65756	junction_4	29875.176337345692	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	33	1358	65.0	-26	True	AATAAA	-4
PB.9350.18	chr5	-	2532	21	incomplete-splice_match	TTC37	ENST00000358746.6	5706	43	5	53304	5	-4067	3prime_fragment	FALSE	canonical	1	222162	junction_19	99675.36731655418	NA	1	NA	TRUE	NA	NA	NA	C	coding	746	2238	295	2532	60.0	-26	False	NA	NA
PB.8099.3	chr3	+	2871	5	novel_not_in_catalog	ARIH2	novel	598	3	NA	NA	0	7772	any annotated donor/acceptor	FALSE	canonical	1	46999	junction_4	75508.52907246638	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	454	933	25.0	-36	True	NA	NA
PB.3057.2	chr13	-	2832	19	novel_in_catalog	MIPEP	novel	543	2	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	4512	junction_18	56004.99405831789	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	719	2674	10.0	1	True	AATAAA	-16
PB.3057.3	chr13	-	2486	20	novel_not_in_catalog	MIPEP	novel	543	2	NA	NA	23	-2	any annotated donor/acceptor	FALSE	canonical	1	5118	junction_3	63943.245151884614	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	56	1921	10.0	-2	True	AATAAA	-15
PB.12032.15	chrX	+	3548	17	incomplete-splice_match	USP9X	ENST00000378308.6	8371	45	111845	-159	1575	159	5prime_fragment	FALSE	canonical	1	502057	junction_6	234435.56518366485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1077	3234	83	3316	40.0	-9627	False	AATAAA	-27
PB.3057.4	chr13	-	4060	2	incomplete-splice_match	MIPEP	ENST00000382172.3	2400	19	20	152526	-1	-1016	3prime_fragment	FALSE	canonical	1	107567	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	80	499	15.0	0	True	AATAAA	-13
PB.8963.6	chr4	-	2716	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	26	55	26	-54	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	279	1577	30.0	-24	True	AGTAAA	-18
PB.9626.2	chr5	-	5252	3	novel_in_catalog	BOD1	novel	1562	4	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	312877	junction_2	249357.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	121	366	227	592	30.0	-13	True	AATAAA	-38
PB.3859.1	chr15	+	2632	5	full-splice_match	DTWD1	ENST00000403028.7	1584	5	47	-1095	-10	1095	multi-exon	FALSE	canonical	1	54409	junction_2	79007.55605755377	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	152	1066	35.0	-21	True	NA	NA
PB.3859.2	chr15	+	3006	1	novel_in_catalog	DTWD1	novel	1584	5	NA	NA	0	-1471	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-3	True	NA	NA
PB.3859.3	chr15	+	2380	5	full-splice_match	DTWD1	ENST00000559223.5	794	5	4	-1590	4	1590	multi-exon	TRUE	canonical	1	27437	junction_2	72780.24485179684	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	130	468	80.0	1	True	NA	NA
PB.10004.1	chr6	-	1558	9	full-splice_match	YIPF3	ENST00000372422.6	1576	9	11	7	6	6	multi-exon	FALSE	canonical	1	950320	junction_8	238142.2107215757	NA	3	1	TRUE	NA	NA	NA	C	coding	350	1053	173	1225	25.0	5	False	ATTAAA	-19
PB.11495.30	chr9	-	1861	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-71	2308	-71	-2026	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1470	390	1859	60.0	-39	True	AATAAA	-37
PB.10004.2	chr6	-	2125	8	incomplete-splice_match	YIPF3	ENST00000510102.5	1639	9	59	-6	7	6	intron_retention	FALSE	canonical	1	19205	junction_6	523597.34191195556	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	1211	1792	25.0	-6	True	ATTAAA	-19
PB.891.1	chr1	-	2081	5	full-splice_match	RGS5	ENST00000313961.9	5862	5	197	3584	-1	1168	multi-exon	FALSE	canonical	1	439359	junction_2	88224.75162475664	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	82	627	20.0	-5	True	AATAAA	-26
PB.891.2	chr1	-	1711	5	full-splice_match	RGS5	ENST00000313961.9	5862	5	197	3954	-1	798	multi-exon	FALSE	canonical	1	439359	junction_2	88224.75162475664	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	82	627	90.0	-5	True	NA	NA
PB.7578.1	chr21	+	2355	11	incomplete-splice_match	PCNT	ENST00000359568.9	10560	47	106508	62	-629	-62	5prime_fragment	FALSE	canonical	1	135988	junction_2	90659.90823533852	NA	1	NA	TRUE	NA	NA	NA	B	coding	530	1593	383	1975	80.0	-1065	False	NA	NA
PB.10185.1	chr6	+	3034	3	novel_not_in_catalog	SLC35F1	novel	4852	8	NA	NA	130604	-26	any annotated donor/acceptor	FALSE	canonical	1	1904	junction_2	20909.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	116	351	168	518	45.0	-215	False	AATAAA	-1
PB.743.8	chr1	+	3472	13	novel_in_catalog	PIP5K1A	novel	373	4	NA	NA	-10	-2	no_combination_of_known_junctions	FALSE	canonical	1	22545	junction_9	84753.24543355749	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	433	1890	15.0	13	True	AATAAA	-18
PB.10185.2	chr6	+	3781	2	incomplete-splice_match	SLC35F1	ENST00000621341.1	4481	7	130762	3	130762	-3	5prime_fragment	FALSE	canonical	1	43723	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	116	351	10	360	10.0	0	True	AATAAA	-24
PB.2000.1	chr11	-	1505	11	full-splice_match	BSCL2	ENST00000407022.7	1516	11	31	-20	2	0	multi-exon	FALSE	canonical	1	255816	junction_10	333781.8197809611	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	217	1413	20.0	1	True	AATAAA	-19
PB.2000.3	chr11	-	2011	12	novel_in_catalog	BSCL2	novel	545	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	81791	junction_11	406140.7820502802	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	532	1920	20.0	-13	True	AATAAA	-18
PB.2000.2	chr11	-	1778	11	full-splice_match	BSCL2	ENST00000403550.5	1693	11	-65	-20	16	0	multi-exon	FALSE	canonical	1	24493	junction_10	396092.06694030116	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	490	1686	20.0	-14	True	AATAAA	-19
PB.10784.10	chr7	-	2883	10	full-splice_match	PNPLA8	ENST00000436062.5	3462	10	162	417	7	-417	multi-exon	FALSE	canonical	1	75667	junction_9	90543.9020055744	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	212	2560	30.0	-22	True	AATATA	-28
PB.10784.11	chr7	-	2907	11	full-splice_match	PNPLA8	ENST00000257694.12	3490	11	59	524	-12	-418	multi-exon	FALSE	canonical	1	114536	junction_9	89421.30640093556	NA	7	NA	TRUE	NA	NA	NA	C	coding	782	2349	237	2585	30.0	-1	True	AATATA	-27
PB.10784.12	chr7	-	2422	11	full-splice_match	PNPLA8	ENST00000257694.12	3490	11	97	971	23	5	multi-exon	FALSE	canonical	1	114536	junction_9	89421.30640093556	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2223	199	2421	70.0	37	True	AATACA	-13
PB.10784.13	chr7	-	2342	10	full-splice_match	PNPLA8	ENST00000436062.5	3462	10	246	874	-1	-4	multi-exon	FALSE	canonical	1	75667	junction_9	90543.9020055744	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2214	128	2341	70.0	62	True	AATACA	-4
PB.10784.14	chr7	-	2278	9	novel_not_in_catalog	PNPLA8	novel	4268	10	NA	NA	11	9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	132070.68820042687	NA	1	1	TRUE	NA	NA	NA	C	coding	563	1692	239	1930	65.0	1994	False	AATACA	-17
PB.10784.15	chr7	-	2479	11	novel_not_in_catalog	PNPLA8	novel	4268	10	NA	NA	-7	-4	any annotated donor/acceptor	FALSE	canonical	1	2165	junction_6	118047.78145395195	NA	3	NA	TRUE	NA	NA	NA	C	coding	749	2247	232	2478	70.0	4	True	AATACA	-4
PB.10784.16	chr7	-	2229	10	novel_not_in_catalog	PNPLA8	novel	4268	10	NA	NA	19	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	125084.19574218454	NA	1	1	TRUE	NA	NA	NA	C	coding	563	1692	203	1894	70.0	33	True	AATACA	-4
PB.10784.17	chr7	-	2268	10	full-splice_match	PNPLA8	ENST00000453144.5	3366	10	189	909	-3	-5	multi-exon	FALSE	canonical	1	9770	junction_9	108277.42188927317	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	355	2268	70.0	8	True	AATACA	-3
PB.11440.6	chr9	+	3506	7	novel_in_catalog	CD274	novel	3343	6	NA	NA	14	-57	intron_retention	FALSE	canonical	1	1793	junction_5	35785.9721104358	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	73	804	25.0	-3	True	AATAAA	-27
PB.9650.20	chr5	-	2434	1	novel_in_catalog	DOK3	novel	2292	6	NA	NA	192	1277	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	118	357	95	451	90.0	7326	False	NA	NA
PB.11440.4	chr9	+	3464	8	novel_in_catalog	CD274	novel	3343	6	NA	NA	17	-57	combination_of_known_junctions	FALSE	canonical	1	8379	junction_4	31645.24169989697	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	70	606	25.0	0	True	AATAAA	-27
PB.11440.5	chr9	+	3508	6	novel_in_catalog	CD274	novel	3343	6	NA	NA	13	-57	intron_retention	FALSE	canonical	1	979	junction_1	39720.95432186896	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	113	880	25.0	-4	True	AATAAA	-27
PB.2383.1	chr12	-	5146	27	incomplete-splice_match	KDM5A	ENST00000399788.6	10763	28	-116	12829	-116	-7502	3prime_fragment	FALSE	canonical	1	161690	junction_26	57023.92291365982	NA	1	NA	TRUE	NA	NA	NA	B	coding	1555	4665	480	5144	70.0	-35	True	AATAAA	-18
PB.11440.3	chr9	+	4794	6	novel_in_catalog	CD274	novel	3343	6	NA	NA	17	4	intron_retention	FALSE	canonical	1	70419	junction_1	12374.327401519648	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	70	945	30.0	0	True	AATAAA	-18
PB.2383.3	chr12	-	3751	23	novel_in_catalog	KDM5A	novel	10763	28	NA	NA	-91	-17	combination_of_known_junctions	FALSE	canonical	1	664	junction_22	85007.90858886538	NA	1	NA	TRUE	NA	NA	NA	B	coding	1099	3297	455	3751	70.0	-10	True	NA	NA
PB.2383.2	chr12	-	3458	22	incomplete-splice_match	KDM5A	ENST00000399788.6	10763	28	175	29782	3	-17	3prime_fragment	FALSE	canonical	1	161690	junction_21	46501.195164266646	NA	1	NA	TRUE	NA	NA	NA	B	coding	1090	3270	189	3458	70.0	4	True	NA	NA
PB.10891.6	chr7	+	2396	6	incomplete-splice_match	SSBP1	ENST00000467681.5	630	7	-18	2978	-13	810	3prime_fragment	FALSE	canonical	1	184811	junction_1	1210235.046676372	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	242	721	20.0	6	True	AATAAA	-29
PB.11232.1	chr8	+	3141	7	full-splice_match	OTUD6B	ENST00000617869.4	3294	7	121	32	-8	-32	multi-exon	FALSE	canonical	1	162934	junction_4	37986.397274404546	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	69	950	80.0	-27	True	NA	NA
PB.5623.1	chr19	-	1521	13	full-splice_match	STAP2	ENST00000600324.5	1508	13	-14	1	-14	0	multi-exon	FALSE	canonical	1	43565	junction_2	101361.74124967796	NA	0	NA	TRUE	NA	NA	NA	A	coding	449	1350	83	1432	10.0	-11	True	ATTAAA	-15
PB.11440.8	chr9	+	1561	7	full-splice_match	CD274	ENST00000381577.3	3644	7	17	2066	17	615	multi-exon	FALSE	canonical	1	70419	junction_1	11409.769960676489	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	70	942	20.0	0	True	AGTAAA	-22
PB.11440.9	chr9	+	4628	7	novel_in_catalog	CD274	novel	3343	6	NA	NA	17	-56	intron_retention	FALSE	canonical	1	8379	junction_4	33465.97417610244	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	70	606	25.0	0	True	AATAAA	-28
PB.9787.14	chr6	+	5074	7	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	30	-6819	intron_retention	FALSE	canonical	1	20040	junction_1	74528.94015843033	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	3773	4354	15.0	1	True	AGTAAA	-20
PB.11187.2	chr8	-	1937	4	full-splice_match	ELOC	ENST00000520242.5	1573	4	115	-479	-26	0	multi-exon	FALSE	canonical	1	249780	junction_1	119005.33111401167	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	107	445	100.0	7	True	NA	NA
PB.2884.1	chr12	-	2709	8	novel_not_in_catalog	AC007570.1	novel	603	2	NA	NA	-29803	-101	intron_retention	FALSE	canonical	1	3210	junction_1	152050.0795393359	NA	0	NA	TRUE	NA	NA	NA	A	coding	313	942	39	980	55.0	-1	True	AATAAA	-13
PB.5205.2	chr17	+	2261	6	novel_in_catalog	AMZ2	novel	2402	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	483660	junction_3	189014.8723062818	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1258	2076	15.0	-39	True	AATAAA	-16
PB.5205.1	chr17	+	1376	8	full-splice_match	AMZ2	ENST00000392720.6	1378	8	4	-2	4	0	multi-exon	FALSE	canonical	1	82429	junction_1	300664.5609782518	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	107	1189	15.0	-28	True	AATAAA	-18
PB.2884.2	chr12	-	3939	7	full-splice_match	KCTD10	ENST00000228495.10	4163	7	225	-1	-14	1	multi-exon	FALSE	canonical	1	271009	junction_4	74835.36107052304	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	58	999	0.0	32	False	AATAAA	-15
PB.2884.5	chr12	-	2610	7	full-splice_match	KCTD10	ENST00000228495.10	4163	7	226	1327	-13	-12	multi-exon	FALSE	canonical	1	271009	junction_4	74835.36107052304	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	57	998	50.0	33	False	AATAAA	-6
PB.5205.5	chr17	+	1759	7	full-splice_match	AMZ2	ENST00000359904.7	2402	7	502	141	-1	-75	multi-exon	FALSE	canonical	1	483660	junction_4	178175.31162094884	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	631	1713	20.0	1	True	AATAAA	-17
PB.5205.4	chr17	+	1899	7	full-splice_match	AMZ2	ENST00000359904.7	2402	7	501	2	0	0	multi-exon	FALSE	canonical	1	483660	junction_4	178175.31162094884	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	632	1714	15.0	0	True	AATAAA	-16
PB.12190.9	chrX	+	2012	5	full-splice_match	ARMCX3	ENST00000491568.6	973	5	11	-1050	10	-172	multi-exon	FALSE	canonical	1	10562	junction_1	217539.99737217865	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	791	1819	25.0	-13	True	GATAAA	-22
PB.12190.8	chrX	+	3900	4	novel_in_catalog	ARMCX3	novel	3730	5	NA	NA	7	1	intron_retention	FALSE	canonical	1	467685	junction_3	30780.85945302156	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	1149	2177	30.0	-16	True	AATAAA	-36
PB.7627.7	chr22	+	3031	17	novel_in_catalog	MED15	novel	590	6	NA	NA	0	3	intron_retention	FALSE	canonical	1	5332	junction_6	256625.1945761257	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	98	2113	15.0	-34	True	AATAAA	-21
PB.6853.3	chr2	-	5739	13	full-splice_match	LNPK	ENST00000272748.8	7610	13	81	1790	-1	-1785	multi-exon	FALSE	canonical	1	92135	junction_12	59236.50127502093	NA	9	NA	TRUE	NA	NA	NA	C	coding	428	1287	168	1454	90.0	2	True	NA	NA
PB.8040.1	chr3	-	1843	1	antisense	novelGene_CTNNB1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	AAAACA	-9
PB.12190.1	chrX	+	3355	1	novel_in_catalog	ARMCX3	novel	3730	5	NA	NA	-8	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	342	1029	1973	3001	80.0	1	True	AATAAA	-19
PB.589.10	chr1	+	3529	1	novel_in_catalog	SARS	novel	1852	11	NA	NA	0	2307	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	14	True	NA	NA
PB.12190.3	chrX	+	1964	5	full-splice_match	ARMCX3	ENST00000471229.6	2051	5	76	11	-10	-11	multi-exon	FALSE	canonical	1	286091	junction_1	100203.81955544409	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	582	1610	80.0	14	True	AATAAA	-19
PB.12190.2	chrX	+	2156	5	full-splice_match	ARMCX3	ENST00000467808.5	506	5	-129	-1521	0	-11	multi-exon	FALSE	canonical	1	16435	junction_1	215016.30485500395	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	774	1802	80.0	-24	True	AATAAA	-19
PB.12190.5	chrX	+	3551	5	full-splice_match	ARMCX3	ENST00000537169.1	3318	5	-232	-1	1	1	multi-exon	FALSE	canonical	1	10562	junction_1	217539.99737217865	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	800	1828	30.0	-22	True	AATAAA	-36
PB.3540.9	chr14	+	3106	12	novel_in_catalog	PSEN1	novel	571	5	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	1	4764	junction_1	134392.70253204886	NA	11	1	TRUE	NA	NA	NA	C	coding	467	1404	591	1994	10.0	262	False	ATTAAA	-25
PB.12190.7	chrX	+	2800	3	novel_in_catalog	ARMCX3	novel	3730	5	NA	NA	2	-11	intron_retention	FALSE	canonical	1	467685	junction_2	36828.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	342	1029	1418	2446	80.0	-21	True	AATAAA	-19
PB.12190.6	chrX	+	3027	5	full-splice_match	ARMCX3	ENST00000471229.6	2051	5	40	-1016	1	-341	multi-exon	FALSE	canonical	1	286091	junction_1	100203.81955544409	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	618	1646	55.0	-22	True	NA	NA
PB.3733.19	chr15	-	3320	13	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	-22	-2	no_combination_of_known_junctions	FALSE	canonical	1	241	junction_10	174153.37370811013	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	764	3319	80.0	15	True	NA	NA
PB.3733.18	chr15	-	3373	14	full-splice_match	UBE3A	ENST00000397954.6	2873	14	-502	2	-1	-2	multi-exon	FALSE	canonical	1	11875	junction_10	151982.61935598982	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2625	748	3372	80.0	-28	True	NA	NA
PB.3733.13	chr15	-	3472	15	novel_not_in_catalog	UBE3A	novel	5726	3	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	170827.88337240176	NA	1	1	TRUE	NA	NA	NA	C	coding	876	2628	844	3471	80.0	-27	True	NA	NA
PB.3733.12	chr15	-	3513	14	full-splice_match	UBE3A	ENST00000630424.2	5075	14	-330	1892	0	-2	multi-exon	FALSE	canonical	1	15357	junction_11	148533.69549876792	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	957	3512	80.0	-37	True	NA	NA
PB.3733.11	chr15	-	3526	15	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	2048	junction_14	164557.87465874758	NA	1	NA	TRUE	NA	NA	NA	C	coding	872	2616	910	3525	80.0	-16	True	NA	NA
PB.3733.10	chr15	-	3568	15	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	12029	junction_11	151901.7998028728	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	1012	3567	80.0	-27	True	NA	NA
PB.3733.17	chr15	-	3382	14	full-splice_match	UBE3A	ENST00000637886.1	8725	14	-68	5411	-2	-2	multi-exon	FALSE	canonical	1	1460	junction_13	157214.7531252984	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2616	766	3381	80.0	40	False	NA	NA
PB.3733.16	chr15	-	2967	13	full-splice_match	UBE3A	ENST00000648336.1	5209	13	350	1892	20	-2	multi-exon	FALSE	canonical	1	94074	junction_12	129007.52772574832	NA	5	NA	TRUE	NA	NA	NA	C	coding	872	2616	351	2966	80.0	419	False	NA	NA
PB.3733.15	chr15	-	3411	14	full-splice_match	UBE3A	ENST00000638011.1	8742	14	-80	5411	0	-2	multi-exon	FALSE	canonical	1	3921	junction_9	158172.789240683	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	855	3410	80.0	-18	True	NA	NA
PB.3733.14	chr15	-	3454	14	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	-1	-2	no_combination_of_known_junctions	FALSE	canonical	1	1307	junction_11	150429.54663721914	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	898	3453	80.0	-28	True	NA	NA
PB.9926.1	chr6	-	2860	6	novel_in_catalog	DAXX	novel	2606	8	NA	NA	-6	0	intron_retention	FALSE	canonical	1	324458	junction_5	280492.8188973115	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	155	1243	10.0	-5	True	AATAAA	-24
PB.5138.1	chr17	-	1642	1	full-splice_match	AC004687.1	ENST00000579003.1	1625	1	-15	-2	-15	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	29	90	235	324	10.0	-4	True	AATAAA	-19
PB.401.14	chr1	-	4252	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	14111	-964	any annotated donor/acceptor	FALSE	canonical	1	552	junction_24	157954.16150656826	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	623	2779	15.0	NA	False	AATAAA	-30
PB.6926.1	chr2	-	2792	9	full-splice_match	RFTN2	ENST00000295049.8	5827	9	459	2576	459	935	multi-exon	FALSE	canonical	1	34270	junction_4	6589.845530008651	NA	2	NA	TRUE	NA	NA	NA	A	coding	501	1506	79	1584	25.0	502	False	AATAAA	-16
PB.9239.1	chr5	-	2360	2	novel_not_in_catalog	PDE4D	novel	558	3	NA	NA	-8	-511779	any annotated donor/acceptor	FALSE	canonical	1	7823	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	284	855	194	1048	30.0	-12	True	AATAAA	-15
PB.9787.12	chr6	+	2619	8	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	29	-6827	any annotated donor/acceptor	FALSE	canonical	1	20040	junction_1	70380.01691227012	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	510	1907	20.0	0	True	AGTAAA	-12
PB.8629.7	chr3	-	3704	3	novel_in_catalog	NCBP2	novel	771	2	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	539606	junction_2	308409.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	25	327	0.0	-2	True	AATAAA	-18
PB.1088.6	chr1	+	2514	13	incomplete-splice_match	CR2	ENST00000367058.7	4063	19	99	14794	99	3129	3prime_fragment	FALSE	canonical	1	47041	junction_1	25045.31909844743	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2424	91	2514	35.0	1	True	AATAAA	-22
PB.718.2	chr1	+	1431	6	full-splice_match	PLEKHO1	ENST00000369124.4	2050	6	162	457	162	-20	multi-exon	FALSE	canonical	1	274776	junction_1	274401.0132418611	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	120	1346	80.0	19	True	GATAAA	-22
PB.718.1	chr1	+	1518	6	novel_in_catalog	PLEKHO1	novel	1809	5	NA	NA	371	-20	combination_of_known_junctions	FALSE	canonical	1	20911	junction_1	364662.5788601841	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	720	1433	80.0	-1043	False	GATAAA	-22
PB.9926.5	chr6	-	2490	8	full-splice_match	DAXX	ENST00000374542.9	2613	8	55	68	-2	-67	multi-exon	FALSE	canonical	1	324458	junction_7	259003.09719958872	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	151	2373	80.0	-1	True	NA	NA
PB.976.2	chr1	-	3701	7	full-splice_match	RNASEL	ENST00000367559.7	4238	7	-3	540	-3	-540	multi-exon	FALSE	canonical	1	48964	junction_6	11244.752061146864	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	258	2483	35.0	-7	True	NA	NA
PB.976.3	chr1	-	2218	6	incomplete-splice_match	RNASEL	ENST00000367559.7	4238	7	-20	2717	-20	1770	3prime_fragment	FALSE	canonical	1	48964	junction_5	12315.833597446825	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	275	2218	50.0	0	True	AATGAA	-31
PB.2277.5	chr11	-	2934	5	full-splice_match	FDXACB1	ENST00000260257.8	2789	5	-290	145	-13	-145	multi-exon	FALSE	canonical	1	37849	junction_2	2326.424442680226	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	339	2213	25.0	-308	False	ATTAAA	-15
PB.2277.4	chr11	-	3174	3	novel_in_catalog	AP001781.2	novel	2939	19	NA	NA	260	-3905	intron_retention	FALSE	canonical	1	38572	junction_2	880.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	238	717	1736	2452	30.0	-3	True	ATTAAA	-16
PB.2277.6	chr11	-	2496	4	full-splice_match	FDXACB1	ENST00000531487.1	2206	4	268	-558	-9	-145	multi-exon	FALSE	canonical	1	9404	junction_3	15030.319912319454	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	348	1775	25.0	-27	False	ATTAAA	-15
PB.2277.1	chr11	-	2898	5	full-splice_match	FDXACB1	ENST00000260257.8	2789	5	3	-112	3	112	multi-exon	TRUE	canonical	1	37849	junction_2	2326.424442680226	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	46	1920	5.0	-15	True	ATTAAA	-16
PB.10875.8	chr7	-	2538	13	full-splice_match	ZC3HAV1	ENST00000242351.9	7100	13	263	4299	-31	-1903	multi-exon	FALSE	canonical	1	188558	junction_4	72019.48451108947	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2484	55	2538	35.0	-32	True	NA	NA
PB.2277.3	chr11	-	2784	5	full-splice_match	FDXACB1	ENST00000260257.8	2789	5	3	2	3	-2	multi-exon	FALSE	canonical	1	37849	junction_2	2326.424442680226	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	46	1920	20.0	-15	True	NA	NA
PB.2277.2	chr11	-	2629	4	full-splice_match	FDXACB1	ENST00000531487.1	2206	4	279	-702	2	-1	multi-exon	FALSE	canonical	1	9404	junction_3	15030.319912319454	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	337	1764	15.0	-16	True	NA	NA
PB.3540.7	chr14	+	2878	13	novel_in_catalog	PSEN1	novel	571	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2973	junction_3	157608.92938014067	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	612	1766	10.0	-20	True	ATTAAA	-25
PB.9926.6	chr6	-	2404	8	novel_not_in_catalog	DAXX	novel	2606	8	NA	NA	3	-67	intron_retention	FALSE	canonical	1	9333	junction_7	334293.64628379385	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	29	2287	80.0	16	True	NA	NA
PB.10875.3	chr7	-	5125	13	full-splice_match	ZC3HAV1	ENST00000464606.5	4776	13	-366	17	-1	-17	multi-exon	FALSE	canonical	1	49126	junction_9	99405.24867919312	NA	1	NA	TRUE	NA	NA	NA	C	coding	1024	3075	390	3464	95.0	-1	True	NA	NA
PB.10875.2	chr7	-	4401	13	full-splice_match	ZC3HAV1	ENST00000242351.9	7100	13	287	2412	-7	-16	multi-exon	FALSE	canonical	1	188558	junction_4	72019.48451108947	NA	1	NA	TRUE	NA	NA	NA	C	coding	902	2709	31	2739	100.0	-8	True	NA	NA
PB.8629.4	chr3	-	1964	4	full-splice_match	NCBP2	ENST00000427641.2	1946	4	13	-31	13	-1	multi-exon	FALSE	canonical	1	62737	junction_2	447712.6735175387	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	45	356	0.0	-22	True	AATAAA	-19
PB.8036.1	chr3	+	3648	5	full-splice_match	ZNF620	ENST00000314529.10	3291	5	55	-412	-14	412	multi-exon	TRUE	canonical	1	15113	junction_2	5682.120950842212	NA	2	NA	TRUE	NA	NA	NA	A	coding	422	1269	95	1363	35.0	-14	True	NA	NA
PB.11497.12	chr9	-	1940	9	novel_not_in_catalog	APTX	novel	2023	8	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	14464	junction_8	166667.9545518574	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	35.0	5	True	AATAAA	-25
PB.11497.13	chr9	-	1816	8	full-splice_match	APTX	ENST00000379819.5	1820	8	-2	6	1	-6	multi-exon	FALSE	canonical	1	92128	junction_7	126334.22303718087	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	3	1073	35.0	21	True	AATAAA	-23
PB.11497.14	chr9	-	1672	8	novel_in_catalog	APTX	novel	2023	8	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	1	92128	junction_7	151897.42956672964	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	443	934	25.0	40	True	AATAAA	-18
PB.11497.15	chr9	-	2304	1	novel_in_catalog	APTX	novel	542	4	NA	NA	-2	-2857	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-13	True	NA	NA
PB.11497.16	chr9	-	1886	1	novel_in_catalog	APTX	novel	542	4	NA	NA	-8	-3281	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-19	True	NA	NA
PB.942.10	chr1	+	3088	16	full-splice_match	DARS2	ENST00000648807.1	3057	16	2	-33	2	33	multi-exon	FALSE	canonical	1	17996	junction_12	83625.87141453296	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	576	2360	45.0	-18	True	NA	NA
PB.701.3	chr1	+	3892	17	full-splice_match	PDE4DIP	ENST00000529945.2	8824	17	229	4703	229	28	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	212	3562	35.0	-14	True	AATAAA	-15
PB.8742.1	chr4	-	4364	23	novel_in_catalog	RFC1	novel	4859	25	NA	NA	1	2	intron_retention	FALSE	canonical	1	13732	junction_11	110102.22486428745	NA	2	1	TRUE	NA	NA	NA	C	coding	978	2937	121	3057	15.0	0	True	AATAAA	-21
PB.4473.1	chr16	+	1900	5	full-splice_match	CMTM3	ENST00000567572.5	1934	5	40	-6	-28	-6	multi-exon	FALSE	canonical	1	157205	junction_1	122537.15842424084	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	103	651	20.0	0	True	AATACA	-18
PB.4473.2	chr16	+	1759	5	full-splice_match	CMTM3	ENST00000567572.5	1934	5	40	135	-28	-104	multi-exon	FALSE	canonical	1	157205	junction_1	122537.15842424084	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	103	651	10.0	0	True	AAAAAG	-25
PB.10776.11	chr7	+	3947	10	incomplete-splice_match	HBP1	ENST00000222574.8	2829	11	-11	5	4	-5	intron_retention	FALSE	canonical	1	94403	junction_1	170276.04364467703	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	198	1742	20.0	1	True	AATAAA	-22
PB.10776.10	chr7	+	1748	10	incomplete-splice_match	HBP1	ENST00000222574.8	2829	11	-12	2205	3	-7	3prime_fragment	FALSE	canonical	1	94403	junction_1	170276.04364467703	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	199	1743	30.0	0	True	AATAAA	-9
PB.10776.13	chr7	+	3272	8	incomplete-splice_match	HBP1	ENST00000222574.8	2829	11	130	10063	130	-3507	3prime_fragment	FALSE	canonical	1	94403	junction_1	182613.69812390802	NA	5	NA	TRUE	NA	NA	NA	C	coding	356	1071	57	1127	55.0	-901	False	AATAAA	-7
PB.10776.12	chr7	+	2651	10	novel_in_catalog	HBP1	novel	2704	11	NA	NA	5	-10	no_combination_of_known_junctions	FALSE	canonical	1	18793	junction_6	225917.48917090052	NA	4	NA	TRUE	NA	NA	NA	C	coding	263	792	197	988	60.0	2	True	NA	NA
PB.3843.1	chr15	-	2395	2	incomplete-splice_match	SLC30A4	ENST00000261867.4	7157	8	-13	40677	-13	-18237	3prime_fragment	FALSE	canonical	1	26351	junction_1	0.0	NA	14	NA	TRUE	NA	NA	NA	B	coding	174	525	329	853	80.0	-1	True	NA	NA
PB.10776.14	chr7	+	2795	11	novel_in_catalog	HBP1	novel	2704	11	NA	NA	212	-9	combination_of_known_junctions	FALSE	canonical	1	4195	junction_1	184157.79945093283	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	162	1706	20.0	-61	False	AATAAA	-18
PB.3843.2	chr15	-	2199	2	incomplete-splice_match	SLC30A4	ENST00000261867.4	7157	8	16	40844	16	-18404	3prime_fragment	FALSE	canonical	1	26351	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	174	525	300	824	75.0	28	False	NA	NA
PB.9466.15	chr5	+	3166	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	3	3843	1	884	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	369	1757	65.0	3	True	NA	NA
PB.10343.11	chr6	+	3375	16	novel_in_catalog	ERMARD	novel	551	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	521	junction_12	78603.24044454034	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	1907	3367	30.0	23	True	AGTAAA	-21
PB.10343.10	chr6	+	1976	18	novel_in_catalog	ERMARD	novel	551	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	917	junction_1	60011.42073635524	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	311	1969	30.0	21	True	AGTAAA	-20
PB.8629.5	chr3	-	4168	2	full-splice_match	NCBP2	ENST00000482976.1	669	2	0	-3499	0	-2	multi-exon	FALSE	canonical	1	103249	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	17	True	AATAAA	-18
PB.2798.1	chr12	-	1756	3	full-splice_match	LUM	ENST00000266718.4	3008	3	332	920	-13	34	multi-exon	FALSE	canonical	1	1282787	junction_1	133950.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	338	1017	124	1140	15.0	-10	True	AATAAA	-15
PB.227.10	chr1	+	2478	12	novel_not_in_catalog	RCC1	novel	2715	12	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	395699.8063897378	NA	13	3	TRUE	NA	NA	NA	C	coding	395	1188	315	1502	30.0	8	True	AATAAA	-14
PB.6807.5	chr2	+	2842	11	novel_not_in_catalog	PSMD14	novel	1954	12	NA	NA	-21	-9678	any annotated donor/acceptor	FALSE	canonical	1	2269	junction_10	390697.5469979432	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	303	1085	25.0	-35	True	NA	NA
PB.9466.18	chr5	+	2659	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	12	4341	10	386	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	360	1748	20.0	12	True	GATAAA	-23
PB.8857.3	chr4	-	1367	5	full-splice_match	PLAC8	ENST00000311507.8	1447	5	68	12	2	-12	multi-exon	FALSE	canonical	1	324868	junction_1	246478.8344229581	NA	4	NA	TRUE	NA	NA	NA	C	coding	115	348	99	446	75.0	-6	True	NA	NA
PB.8857.2	chr4	-	2538	5	full-splice_match	PLAC8	ENST00000311507.8	1447	5	66	-1157	0	1157	multi-exon	FALSE	canonical	1	324868	junction_1	246478.8344229581	NA	4	NA	TRUE	NA	NA	NA	C	coding	115	348	101	448	25.0	-8	True	CATAAA	-15
PB.8857.1	chr4	-	3050	5	full-splice_match	PLAC8	ENST00000311507.8	1447	5	68	-1671	2	1671	multi-exon	FALSE	canonical	1	324868	junction_1	246478.8344229581	NA	3	NA	TRUE	NA	NA	NA	C	coding	115	348	99	446	10.0	-6	True	AAAACA	-11
PB.8857.4	chr4	-	720	5	full-splice_match	PLAC8	ENST00000311507.8	1447	5	78	649	-9	-9	multi-exon	FALSE	canonical	1	324868	junction_1	246478.8344229581	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	89	436	30.0	4	True	TATAAA	-43
PB.12350.1	chrX	+	2066	10	full-splice_match	ATP6AP1	ENST00000369762.6	2099	10	32	1	1	0	multi-exon	FALSE	canonical	1	930566	junction_1	348523.05228251545	NA	0	NA	TRUE	NA	NA	NA	A	coding	470	1413	30	1442	0.0	-13	True	AATAAA	-20
PB.8629.2	chr3	-	2136	4	novel_not_in_catalog	NCBP2	novel	771	2	NA	NA	1	0	intron_retention	FALSE	canonical	1	92	junction_3	490556.60383079137	NA	12	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	3	True	AATAAA	-20
PB.8542.1	chr3	-	1426	6	full-splice_match	DNAJC19	ENST00000382564.7	1454	6	25	3	-8	-3	multi-exon	FALSE	canonical	1	14554	junction_3	116277.53634197793	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	148	498	25.0	-41	True	AATAAA	-21
PB.8542.2	chr3	-	1983	3	full-splice_match	DNAJC19	ENST00000482363.1	1133	3	28	-878	6	293	multi-exon	FALSE	canonical	1	109763	junction_1	119601.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-27	True	NA	NA
PB.9729.1	chr6	-	2735	2	full-splice_match	LINC00518	ENST00000487130.1	999	2	26	-1762	-13	1469	multi-exon	FALSE	canonical	1	2673	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	118	357	267	623	5.0	-42	False	ATTAAA	-14
PB.10345.12	chr6	+	3393	10	novel_in_catalog	FAM120B	novel	3721	11	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	2585	junction_1	75144.64502560839	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	132	1079	30.0	1	True	AATAAA	-27
PB.4016.8	chr15	+	2438	5	incomplete-splice_match	CHRNA5	ENST00000559554.5	1051	6	-51	1906	0	-1645	3prime_fragment	FALSE	canonical	1	29291	junction_1	36653.52707789525	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	201	1511	30.0	0	True	AATAAA	-34
PB.10345.10	chr6	+	3050	10	novel_in_catalog	FAM120B	novel	3721	11	NA	NA	13	1	no_combination_of_known_junctions	FALSE	canonical	1	7653	junction_3	80200.954732164	NA	1	NA	TRUE	NA	NA	NA	C	coding	876	2631	94	2724	25.0	9	True	NA	NA
PB.4016.6	chr15	+	2068	6	full-splice_match	CHRNA5	ENST00000299565.9	3623	6	-19	1574	-19	-6	multi-exon	FALSE	canonical	1	29291	junction_1	37867.00513851076	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	220	1626	40.0	1	True	AATATA	-19
PB.4016.7	chr15	+	1923	6	full-splice_match	CHRNA5	ENST00000299565.9	3623	6	-1	1701	-1	33	multi-exon	FALSE	canonical	1	29291	junction_1	37867.00513851076	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	202	1608	25.0	-1	True	AGTAAA	-18
PB.4016.4	chr15	+	1972	6	novel_in_catalog	CHRNA5	novel	3623	6	NA	NA	-33	422	intron_retention	FALSE	canonical	1	16681	junction_5	44180.62735362638	NA	3	NA	TRUE	NA	NA	NA	C	coding	243	732	234	965	25.0	-74	False	AATAAA	-19
PB.4016.5	chr15	+	2477	6	full-splice_match	CHRNA5	ENST00000299565.9	3623	6	-27	1173	-27	395	multi-exon	FALSE	canonical	1	29291	junction_1	37867.00513851076	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	228	1634	70.0	-68	False	NA	NA
PB.4016.2	chr15	+	2835	5	incomplete-splice_match	CHRNA5	ENST00000559554.5	1051	6	-111	1569	-60	-1308	3prime_fragment	FALSE	canonical	1	29291	junction_1	36653.52707789525	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	261	1571	30.0	-101	False	AATAAA	-18
PB.4016.3	chr15	+	1725	6	full-splice_match	CHRNA5	ENST00000559554.5	1051	6	-87	-587	-36	421	multi-exon	FALSE	canonical	1	6088	junction_5	47126.05025079017	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	237	719	25.0	-77	False	AATAAA	-18
PB.4016.1	chr15	+	2240	5	incomplete-splice_match	CHRNA5	ENST00000559554.5	1051	6	-112	2165	-61	-1904	3prime_fragment	FALSE	canonical	1	29291	junction_1	36653.52707789525	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	262	1572	100.0	-102	False	NA	NA
PB.8372.12	chr3	-	1668	12	novel_not_in_catalog	TPRA1	novel	4235	13	NA	NA	-11	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	184209.04972264258	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	242	1363	30.0	7124	False	AATAAA	-14
PB.8629.3	chr3	-	2127	4	full-splice_match	NCBP2	ENST00000428425.1	2220	4	87	6	1	-6	multi-exon	FALSE	canonical	1	103249	junction_3	443578.9551352599	NA	12	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	18	True	AATAAA	-7
PB.6493.1	chr2	+	1976	2	full-splice_match	COMMD1	ENST00000471704.1	604	2	26	-1398	26	1398	multi-exon	FALSE	canonical	1	504101	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	156	471	7	477	95.0	-1	True	NA	NA
PB.184.4	chr1	+	1636	8	incomplete-splice_match	MACO1	ENST00000374343.4	3917	11	-26	14479	-26	-13500	3prime_fragment	FALSE	canonical	1	137083	junction_1	69246.54026928208	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1431	206	1636	60.0	-3	True	NA	NA
PB.11911.2	chr9	+	3124	15	full-splice_match	RABL6	ENST00000311502.11	3091	15	-33	0	-15	0	multi-exon	FALSE	canonical	1	546708	junction_10	274280.18584953994	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	270	2459	0.0	-20	True	CATAAA	-20
PB.3570.18	chr14	-	4327	22	full-splice_match	NEK9	ENST00000238616.9	8310	22	183	3800	36	934	multi-exon	FALSE	canonical	1	183956	junction_4	77049.51921925515	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	331	2916	15.0	7976	False	TATAAA	-16
PB.3570.19	chr14	-	2255	14	incomplete-splice_match	NEK9	ENST00000238616.9	8310	22	38	24086	-2	-6769	3prime_fragment	FALSE	canonical	1	192578	junction_13	74462.25943714847	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	122	1900	65.0	5	True	NA	NA
PB.8534.1	chr3	+	1706	14	full-splice_match	ACTL6A	ENST00000450518.6	1750	14	37	7	0	2	multi-exon	FALSE	canonical	1	219310	junction_1	211870.1548553686	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	153	1316	30.0	-3	True	AATAAA	-16
PB.8534.7	chr3	+	3575	13	novel_in_catalog	ACTL6A	novel	1901	14	NA	NA	-12	2	intron_retention	FALSE	canonical	1	358668	junction_1	187079.467329376	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	2505	3185	30.0	21	True	AATAAA	-16
PB.8534.6	chr3	+	1717	14	full-splice_match	ACTL6A	ENST00000429709.6	1901	14	60	124	10	43	multi-exon	FALSE	canonical	1	358668	junction_1	185956.4427987556	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	154	1443	30.0	14	True	AGTAAA	-17
PB.8973.7	chr4	-	5847	5	full-splice_match	ANKRD50	ENST00000504087.5	8794	5	0	2947	0	360	multi-exon	FALSE	canonical	1	93396	junction_4	11157.245728673362	NA	0	NA	TRUE	NA	NA	NA	C	coding	1429	4290	1039	5328	40.0	-1	True	AATAAA	-32
PB.8534.4	chr3	+	2471	14	full-splice_match	ACTL6A	ENST00000429709.6	1901	14	50	-620	0	620	multi-exon	FALSE	canonical	1	358668	junction_1	185956.4427987556	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	164	1453	35.0	4	True	AATAAA	-24
PB.6967.11	chr2	-	2558	19	full-splice_match	NDUFS1	ENST00000233190.10	11819	19	167	9094	-11	34	multi-exon	FALSE	canonical	1	480962	junction_18	196264.18197030303	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	101	2284	15.0	-12	True	CATAAA	-14
PB.3570.11	chr14	-	5593	23	novel_not_in_catalog	NEK9	novel	8310	22	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	1251	junction_17	121722.96869060212	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	126	3152	25.0	1	True	AATAAA	-14
PB.6967.13	chr2	-	2472	18	full-splice_match	NDUFS1	ENST00000423725.5	2631	18	71	88	-13	38	multi-exon	FALSE	canonical	1	18211	junction_16	266132.0946481654	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	182	2194	15.0	-14	True	CATAAA	-18
PB.3570.13	chr14	-	5458	23	novel_not_in_catalog	NEK9	novel	8310	22	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	canonical	1	1884	junction_1	134062.90219809825	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	291	2882	25.0	-12	True	AATAAA	-14
PB.6967.15	chr2	-	2522	18	novel_in_catalog	NDUFS1	novel	11819	19	NA	NA	-19	35	no_combination_of_known_junctions	FALSE	canonical	1	7621	junction_7	277371.10057702113	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	193	2247	15.0	-10	False	CATAAA	-15
PB.3570.15	chr14	-	5433	22	novel_not_in_catalog	NEK9	novel	8310	22	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	541	junction_10	105287.27888992739	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	1761	2993	25.0	-3	True	AATAAA	-13
PB.3570.16	chr14	-	5641	23	novel_not_in_catalog	NEK9	novel	8310	22	NA	NA	13	-5	any annotated donor/acceptor	FALSE	canonical	1	1884	junction_1	121854.21525924443	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	107	3145	20.0	20	True	AATAAA	-11
PB.3570.17	chr14	-	4808	22	full-splice_match	NEK9	ENST00000238616.9	8310	22	20	3482	-7	-714	multi-exon	FALSE	canonical	1	183956	junction_4	77049.51921925515	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	140	3079	20.0	-13	True	ATTAAA	-41
PB.9628.2	chr5	+	3209	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-44	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	7	NA	TRUE	NA	NA	NA	C	coding	322	969	130	1098	40.0	9	True	AATAAA	-10
PB.7068.18	chr2	-	2326	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-105	157	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	2202564.652642683	NA	1	NA	TRUE	NA	NA	NA	C	coding	584	1755	132	1886	30.0	-1	True	ATTAAA	-17
PB.7068.19	chr2	-	2232	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-105	157	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	2731912.0093057	NA	5	2	TRUE	NA	NA	NA	C	coding	560	1683	110	1792	30.0	-1	True	ATTAAA	-17
PB.7068.16	chr2	-	2693	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	76	157	any annotated donor/acceptor	FALSE	canonical	1	8340	junction_7	2184806.6665776367	NA	4	NA	TRUE	NA	NA	NA	C	coding	695	2088	166	2253	30.0	-35	False	ATTAAA	-17
PB.7068.14	chr2	-	3035	14	novel_in_catalog	NCL	novel	4034	14	NA	NA	0	157	combination_of_known_junctions	FALSE	canonical	1	8280	junction_13	2213980.5203611283	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	511	2595	30.0	4	True	ATTAAA	-17
PB.7068.15	chr2	-	2826	15	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-107	157	any annotated donor/acceptor	FALSE	canonical	1	2295	junction_11	2421008.531098159	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	134	2386	30.0	-3	True	ATTAAA	-17
PB.7068.12	chr2	-	1385	5	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-105	157	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	3340748.7060968084	NA	5	1	TRUE	NA	NA	NA	C	coding	269	810	132	941	30.0	-1	True	ATTAAA	-17
PB.948.1	chr1	+	3217	12	novel_not_in_catalog	RABGAP1L	novel	2605	14	NA	NA	13	-72052	any annotated donor/acceptor	FALSE	canonical	1	7295	junction_11	75736.05462906593	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	162	1736	20.0	10	True	NA	NA
PB.10881.2	chr7	+	3062	6	novel_not_in_catalog	TBXAS1	novel	2080	15	NA	NA	0	-5963	any annotated donor/acceptor	TRUE	canonical	1	6577	junction_5	112962.25985593596	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	143	631	70.0	-15	True	NA	NA
PB.465.12	chr1	-	5114	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	29	1533	0	-1533	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	2	NA	TRUE	NA	NA	NA	C	coding	387	1164	87	1250	80.0	31	False	NA	NA
PB.1101.5	chr1	+	2605	6	novel_not_in_catalog	HHAT	novel	3164	10	NA	NA	-167	-1	any annotated donor/acceptor	FALSE	canonical	1	1430	junction_1	20716.31403894042	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	189	689	25.0	-239	False	AATAAA	-21
PB.11722.29	chr9	-	1916	15	full-splice_match	PTBP3	ENST00000374255.6	3413	15	123	1374	44	-958	multi-exon	FALSE	canonical	1	12613	junction_14	205488.98408446697	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	26	1684	70.0	116	False	NA	NA
PB.8847.1	chr4	-	2489	1	novel_in_catalog	HNRNPD	novel	3033	9	NA	NA	3612	-7534	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	4620	False	NA	NA
PB.948.6	chr1	+	3553	13	incomplete-splice_match	RABGAP1L	ENST00000251507.8	2899	21	23	562345	23	1692	3prime_fragment	FALSE	canonical	1	111294	junction_1	44250.22413149452	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	152	1900	90.0	20	True	NA	NA
PB.5536.6	chr18	+	2475	8	novel_in_catalog	NFATC1	novel	4642	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	5509	junction_5	46345.60269478494	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	89	1969	20.0	-25	True	AATAAA	-19
PB.5536.4	chr18	+	2587	8	novel_not_in_catalog	NFATC1	novel	4642	10	NA	NA	19	-8	any annotated donor/acceptor	FALSE	canonical	1	57	junction_6	43636.78091065951	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	100	2235	20.0	-36	True	AATAAA	-11
PB.5536.5	chr18	+	2570	8	full-splice_match	NFATC1	ENST00000592223.5	2531	8	-37	-2	22	2	multi-exon	FALSE	canonical	1	33000	junction_1	33251.31602121722	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	97	2208	15.0	-33	True	AATAAA	-21
PB.5536.2	chr18	+	4343	10	full-splice_match	NFATC1	ENST00000318065.9	4302	10	-42	1	6	-1	multi-exon	FALSE	canonical	1	21505	junction_9	39221.641028743994	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	113	2551	20.0	-8417	False	AATAAA	-19
PB.5536.3	chr18	+	4649	10	full-splice_match	NFATC1	ENST00000329101.8	4595	10	-53	-1	9	1	multi-exon	FALSE	canonical	1	31267	junction_9	37500.66892177054	NA	0	NA	TRUE	NA	NA	NA	C	coding	930	2793	110	2902	15.0	-46	True	AATAAA	-21
PB.5536.1	chr18	+	2805	8	full-splice_match	NFATC1	ENST00000591814.5	4819	8	1	2013	1	0	multi-exon	FALSE	canonical	1	28550	junction_1	34538.431578726435	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	295	2445	20.0	1	True	AATAAA	-19
PB.6855.1	chr2	+	1615	3	full-splice_match	HOXD8	ENST00000429017.2	1608	3	-9	2	-9	-2	multi-exon	FALSE	canonical	1	4673	junction_1	15103.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	106	321	214	534	15.0	-24	True	AATAAA	-15
PB.447.3	chr1	+	2556	11	full-splice_match	ATG4C	ENST00000371120.7	2890	11	-19	353	-19	-353	multi-exon	FALSE	canonical	1	50711	junction_1	49214.830345029135	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	179	1555	10.0	10	True	AATAAA	-22
PB.9243.1	chr5	+	655	4	full-splice_match	NDUFAF2	ENST00000296597.9	719	4	51	13	-27	-2	multi-exon	FALSE	canonical	1	6319	junction_3	108860.27491646753	NA	0	NA	TRUE	NA	NA	NA	A	coding	169	510	77	586	15.0	-5479	False	AATAAA	-14
PB.11054.4	chr8	+	3036	12	novel_not_in_catalog	ESCO2	novel	698	3	NA	NA	-13	-755	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	38099.33134247636	NA	3	NA	TRUE	NA	NA	NA	C	coding	601	1806	84	1889	15.0	-13	True	NA	NA
PB.11495.18	chr9	-	4233	4	novel_not_in_catalog	TOPORS	novel	4098	3	NA	NA	-33	-3	any annotated donor/acceptor	FALSE	canonical	1	3820	junction_2	56155.617991435196	NA	4	NA	TRUE	NA	NA	NA	C	coding	978	2937	457	3393	25.0	-1	True	AATAAA	-18
PB.11495.19	chr9	-	3876	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-47	269	-47	13	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	366	3302	85.0	-15	True	AGTAAA	-16
PB.11054.1	chr8	+	2729	11	full-splice_match	ESCO2	ENST00000305188.12	3922	11	139	1054	-29	-1054	multi-exon	FALSE	canonical	1	86831	junction_1	20774.16344982392	NA	5	NA	TRUE	NA	NA	NA	C	coding	601	1806	100	1905	25.0	2	True	ATTAAA	-22
PB.11054.3	chr8	+	1973	11	full-splice_match	ESCO2	ENST00000305188.12	3922	11	152	1797	-16	-1797	multi-exon	FALSE	canonical	1	86831	junction_1	20774.16344982392	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	87	1892	65.0	-16	True	NA	NA
PB.11054.2	chr8	+	3744	11	full-splice_match	ESCO2	ENST00000305188.12	3922	11	149	29	-19	-29	multi-exon	FALSE	canonical	1	86831	junction_1	20774.16344982392	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	90	1895	100.0	-19	True	NA	NA
PB.354.1	chr1	+	4507	22	full-splice_match	KDM4A	ENST00000372396.3	4474	22	-31	-2	-31	2	multi-exon	FALSE	canonical	1	133986	junction_1	80858.8783372	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	166	3360	15.0	-9	True	AATAAA	-17
PB.1790.1	chr11	+	3547	5	novel_in_catalog	DNHD1	novel	14862	43	NA	NA	215	-1	intron_retention	FALSE	canonical	1	35132	junction_2	3536.905029471388	NA	0	NA	TRUE	NA	NA	NA	A	coding	325	978	68	1045	35.0	NA	False	AATAAA	-17
PB.11495.10	chr9	-	2973	18	full-splice_match	DDX58	ENST00000379883.2	4353	18	128	1252	12	-1252	multi-exon	FALSE	canonical	1	131787	junction_17	45602.26363326176	NA	1	NA	TRUE	NA	NA	NA	C	coding	925	2778	31	2808	35.0	-2	True	NA	NA
PB.11495.11	chr9	-	3168	19	novel_in_catalog	DDX58	novel	4089	17	NA	NA	-26298	-1305	no_combination_of_known_junctions	FALSE	canonical	1	8048	junction_17	78995.23243929908	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	429	3056	40.0	-37	True	AATATA	-7
PB.9837.2	chr6	-	3735	4	novel_in_catalog	ZNRD1ASP	novel	1986	3	NA	NA	9	195	combination_of_known_junctions	FALSE	canonical	1	8063	junction_1	9303.746103347596	NA	0	NA	TRUE	NA	NA	NA	B	coding	187	564	613	1176	15.0	-14	True	NA	NA
PB.9257.11	chr5	+	2613	13	full-splice_match	NLN	ENST00000380985.9	8661	13	32	6016	-15	30	multi-exon	FALSE	canonical	1	123123	junction_1	53629.4396055909	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	147	2261	20.0	-19	True	TTTAAA	-27
PB.11495.14	chr9	-	2436	17	incomplete-splice_match	DDX58	ENST00000379883.2	4353	18	102	3767	-14	-3767	3prime_fragment	FALSE	canonical	1	131787	junction_16	46394.93211914253	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2379	57	2435	60.0	-28	True	NA	NA
PB.9837.1	chr6	-	5662	4	novel_in_catalog	ZNRD1ASP	novel	1986	3	NA	NA	0	2108	combination_of_known_junctions	FALSE	canonical	1	8063	junction_1	9303.746103347596	NA	2	NA	TRUE	NA	NA	NA	B	coding	187	564	627	1190	80.0	-28	True	NA	NA
PB.2056.4	chr11	+	2992	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	2238	3478	-223	-618	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-6162	False	AATAAA	-5
PB.2056.5	chr11	+	1520	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1285	5903	5	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	2	True	NA	NA
PB.2056.6	chr11	+	1052	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	3	-701	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	TTTAAA	-28
PB.2056.7	chr11	+	855	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	6570	3	114	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.2056.1	chr11	+	2060	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	-18	6666	-18	18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-18	True	NA	NA
PB.2056.2	chr11	+	1569	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1	7138	1	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1	True	AAAACA	-35
PB.2056.3	chr11	+	1693	3	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	18	37	intron_retention	FALSE	non_canonical	0	0	junction_1	2578.5	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	18	True	NA	NA
PB.4722.30	chr17	+	1668	17	novel_not_in_catalog	ACADVL	novel	2227	21	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1056733.0428493381	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	718	1500	10.0	-3	True	AATAAA	-16
PB.4722.31	chr17	+	3379	16	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-1	0	intron_retention	FALSE	canonical	1	648871	junction_1	849400.3894506969	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	2399	3211	10.0	9	True	AATAAA	-16
PB.4722.32	chr17	+	2403	16	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-16	0	intron_retention	FALSE	canonical	1	1709466	junction_1	600925.6578000162	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	1422	2234	5.0	-30	True	AATAAA	-17
PB.4722.33	chr17	+	2277	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	14	0	intron_retention	FALSE	canonical	1	1569944	junction_6	662448.8356980361	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1297	2109	10.0	0	True	AATAAA	-16
PB.2056.8	chr11	+	739	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	6686	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	NA	NA
PB.2056.9	chr11	+	647	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	6778	3	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.2644.2	chr12	+	2056	3	full-splice_match	HOXC6	ENST00000394331.3	2943	3	976	-89	976	-1	multi-exon	FALSE	canonical	1	29931	junction_1	22723.0	NA	10	NA	TRUE	NA	NA	NA	C	coding	153	462	735	1196	30.0	3	True	AATAAA	-24
PB.2644.1	chr12	+	1877	3	full-splice_match	HOXC6	ENST00000394331.3	2943	3	974	92	974	-92	multi-exon	FALSE	canonical	1	29931	junction_1	22723.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	737	1198	75.0	1	True	NA	NA
PB.10083.10	chr6	-	1808	11	novel_in_catalog	PGM3	novel	605	4	NA	NA	-8	212	no_combination_of_known_junctions	FALSE	canonical	1	9254	junction_5	134187.2222852832	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	99	905	20.0	-18	True	ATTAAA	-11
PB.10083.11	chr6	-	1842	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	28	4237	0	13	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	90	1718	25.0	-9	True	NA	NA
PB.10083.12	chr6	-	1950	13	novel_in_catalog	PGM3	novel	605	4	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	1	7045	junction_1	122521.3308454446	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	96	1796	20.0	-15	True	ATTAAA	-17
PB.788.2	chr1	+	777	3	full-splice_match	CKS1B	ENST00000308987.5	759	3	-20	2	-4	-1	multi-exon	FALSE	canonical	1	753	junction_2	36193.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	ATTAAA	-19
PB.11132.5	chr8	-	2493	9	full-splice_match	LYPLA1	ENST00000316963.7	2585	9	85	7	-4	-6	multi-exon	FALSE	canonical	1	25486	junction_4	63742.584417228485	NA	92	3	TRUE	NA	NA	NA	C	coding	225	678	125	802	15.0	-4	True	AATAAA	-17
PB.788.5	chr1	+	4569	1	genic	CKS1B	novel	NA	NA	NA	NA	-1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	1	True	ATTAAA	-22
PB.9481.13	chr5	+	3732	18	full-splice_match	CTNNA1	ENST00000302763.11	3756	18	23	1	0	0	multi-exon	FALSE	canonical	1	840118	junction_11	372950.4219883763	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	68	2788	35.0	21	True	AATAAA	-21
PB.8669.14	chr4	-	1801	12	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	10	0	intron_retention	FALSE	canonical	1	25908	junction_8	326991.1430407671	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	531	959	25.0	-25	True	AATAAA	-16
PB.8669.15	chr4	-	2202	11	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	352520	junction_10	166555.05715576457	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	717	1901	20.0	7578	False	AATAAA	-15
PB.8669.16	chr4	-	1709	13	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	40608	junction_10	255804.93375393323	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	430	1440	20.0	-27	True	AATAAA	-15
PB.8669.11	chr4	-	2547	9	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	352520	junction_8	179329.24413264976	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1838	2275	25.0	7574	False	AATAAA	-18
PB.8669.12	chr4	-	2307	9	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	131872	junction_5	260101.57038642495	NA	33	2	TRUE	NA	NA	NA	C	coding	146	441	68	508	25.0	10	True	AATAAA	-16
PB.8669.13	chr4	-	2214	11	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	352520	junction_10	168836.07486046932	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	674	1372	25.0	9	True	AATAAA	-16
PB.7081.8	chr2	-	2417	8	novel_in_catalog	HJURP	novel	823	3	NA	NA	0	-674	combination_of_known_junctions	FALSE	canonical	1	11876	junction_4	110166.2355246537	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	643	2217	15.0	-1	True	AATAAA	-20
PB.2680.19	chr12	-	2396	13	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	186108.78063385628	NA	5	NA	TRUE	NA	NA	NA	B	coding	377	1134	77	1210	25.0	-20	True	AATAAA	-17
PB.8295.10	chr3	-	3025	5	novel_not_in_catalog	BTLA	novel	3213	5	NA	NA	-57	0	any annotated donor/acceptor	FALSE	canonical	1	6052	junction_4	54695.45336908727	NA	5	1	TRUE	NA	NA	NA	B	coding	241	726	160	885	20.0	5	True	ATTAAA	-15
PB.8295.17	chr3	-	2747	2	incomplete-splice_match	BTLA	ENST00000383680.4	726	4	-262	11265	-59	-7617	3prime_fragment	FALSE	canonical	1	116658	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	212	639	263	901	80.0	3	True	NA	NA
PB.4026.2	chr15	+	7080	29	full-splice_match	CEMIP	ENST00000220244.7	7226	29	28	118	0	-118	multi-exon	FALSE	canonical	1	132957	junction_1	52479.81693499523	NA	2	1	TRUE	NA	NA	NA	C	coding	1361	4086	261	4346	20.0	0	True	AATAAA	-18
PB.4026.1	chr15	+	7196	29	full-splice_match	CEMIP	ENST00000220244.7	7226	29	27	3	-1	-3	multi-exon	FALSE	canonical	1	132957	junction_1	52479.81693499523	NA	0	NA	TRUE	NA	NA	NA	C	coding	1361	4086	262	4347	10.0	-1	True	AGTAAA	-19
PB.6967.8	chr2	-	2908	19	full-splice_match	NDUFS1	ENST00000233190.10	11819	19	19	8892	19	110	multi-exon	FALSE	canonical	1	480962	junction_18	196264.18197030303	NA	2	1	TRUE	NA	NA	NA	C	coding	727	2184	249	2432	30.0	-66	False	NA	NA
PB.2680.13	chr12	-	4063	24	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	3	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	154223.2556857551	NA	5	NA	TRUE	NA	NA	NA	B	coding	400	1203	1425	2627	25.0	2	True	AATAAA	-17
PB.2680.12	chr12	-	4288	22	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	177223.53053133472	NA	5	NA	TRUE	NA	NA	NA	B	coding	373	1122	89	1210	25.0	2718	False	AATAAA	-17
PB.2680.11	chr12	-	4303	24	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154223.2556857551	NA	3	1	TRUE	NA	NA	NA	B	coding	393	1182	1481	2662	25.0	0	True	AATAAA	-17
PB.2680.10	chr12	-	4384	23	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	2	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	172701.65678276625	NA	3	1	TRUE	NA	NA	NA	B	coding	373	1122	86	1207	25.0	2721	False	AATAAA	-17
PB.2680.17	chr12	-	5526	21	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	882	junction_15	128815.89989927485	NA	5	NA	TRUE	NA	NA	NA	B	coding	393	1182	2556	3737	25.0	2715	False	AATAAA	-17
PB.6449.1	chr2	-	3163	6	novel_not_in_catalog	ATP6V1E2	novel	857	5	NA	NA	-19	-4	intron_retention	FALSE	canonical	1	7064	junction_2	22841.4677724528	NA	4	NA	TRUE	NA	NA	NA	A	coding	226	681	2303	2983	45.0	-6	True	AATAAA	-17
PB.7110.40	chr2	+	3129	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	1966	junction_11	932491.7578231008	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	89	1180	25.0	-34	True	AATAAA	-19
PB.9196.4	chr5	-	4525	9	full-splice_match	PRKAA1	ENST00000397128.6	5088	9	21	542	-3	-542	multi-exon	FALSE	canonical	1	288214	junction_6	81797.04108760598	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	16	1668	30.0	-1	True	AATAAA	-14
PB.9196.5	chr5	-	4588	9	novel_not_in_catalog	PRKAA1	novel	5088	9	NA	NA	-5	-445	any annotated donor/acceptor	FALSE	canonical	1	2491	junction_6	163148.95779734352	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	18	1634	20.0	-3	True	AATAAA	-18
PB.9196.6	chr5	-	4575	9	novel_not_in_catalog	PRKAA1	novel	5088	9	NA	NA	266	-445	any annotated donor/acceptor	FALSE	canonical	1	1693	junction_8	162198.39146146763	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	251	1621	20.0	533	False	AATAAA	-18
PB.9196.7	chr5	-	4549	8	novel_in_catalog	PRKAA1	novel	5088	9	NA	NA	-3	-445	combination_of_known_junctions	FALSE	canonical	1	19087	junction_4	166076.5149645654	NA	7	NA	TRUE	NA	NA	NA	C	coding	301	906	690	1595	20.0	223	False	AATAAA	-18
PB.7110.43	chr2	+	3647	16	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1224458.6704720561	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	595	1560	25.0	-31	True	AATAAA	-20
PB.9196.2	chr5	-	5081	9	full-splice_match	PRKAA1	ENST00000397128.6	5088	9	6	1	-3	-1	multi-exon	FALSE	canonical	1	288214	junction_6	81797.04108760598	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	31	1683	25.0	223	False	AATAAA	-25
PB.9196.3	chr5	-	4568	10	full-splice_match	PRKAA1	ENST00000354209.7	1918	10	199	-2849	-1	-542	multi-exon	FALSE	canonical	1	42402	junction_7	183298.46416651306	NA	2	NA	TRUE	NA	NA	NA	C	coding	565	1698	14	1711	30.0	1	True	AATAAA	-14
PB.8823.10	chr4	+	2466	5	novel_not_in_catalog	PARM1	novel	4308	3	NA	NA	-11	-2645	any annotated donor/acceptor	FALSE	canonical	1	3429	junction_1	111712.56805973087	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	1	330	10.0	-2	True	AATAAA	-18
PB.9196.9	chr5	-	3854	9	novel_not_in_catalog	PRKAA1	novel	5088	9	NA	NA	1	-445	any annotated donor/acceptor	FALSE	canonical	1	711	junction_1	167690.77568618488	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	8	1519	20.0	7	True	AATAAA	-18
PB.3122.1	chr13	+	2604	8	novel_not_in_catalog	SLC25A15	novel	1142	7	NA	NA	73	2348	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	50486.89949413226	NA	0	NA	TRUE	NA	NA	NA	A	coding	301	906	164	1069	25.0	-41	False	ATTAAA	-14
PB.6869.10	chr2	+	3329	23	novel_in_catalog	OSBPL6	novel	3637	26	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	13969	junction_3	24271.327238862534	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	513	3116	100.0	1	True	NA	NA
PB.11739.5	chr9	-	2961	11	novel_in_catalog	ALAD	novel	3173	12	NA	NA	-21	0	no_combination_of_known_junctions	FALSE	canonical	1	2955	junction_10	121690.25436903318	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	177	980	35.0	-28	True	NA	NA
PB.11117.10	chr8	+	2768	22	novel_not_in_catalog	HOOK3	novel	14398	22	NA	NA	5	532	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	56438.51084269135	NA	1	1	TRUE	NA	NA	NA	C	coding	549	1650	182	1831	20.0	-27	True	TTTAAA	-26
PB.5073.3	chr17	-	2327	6	novel_in_catalog	SCRN2	novel	1779	7	NA	NA	0	1	intron_retention	FALSE	canonical	1	305851	junction_5	33161.589318969614	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	1344	1766	25.0	-29	True	AATAAA	-16
PB.852.35	chr1	-	4091	34	novel_not_in_catalog	COPA	novel	5175	32	NA	NA	1	6	any annotated donor/acceptor	FALSE	canonical	1	686	junction_1	380697.3336295468	NA	3	NA	TRUE	NA	NA	NA	C	coding	1224	3675	82	3756	90.0	-5	True	NA	NA
PB.5073.1	chr17	-	2827	4	novel_in_catalog	SCRN2	novel	1779	7	NA	NA	-1	5	intron_retention	FALSE	canonical	1	305851	junction_3	37436.66283501004	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	1574	1996	30.0	-8	True	AATAAA	-20
PB.2632.1	chr12	+	2490	4	novel_in_catalog	PFDN5	novel	847	6	NA	NA	-6	0	intron_retention	FALSE	canonical	1	5876834	junction_3	924595.0631410968	NA	2	NA	TRUE	NA	NA	NA	B	coding	99	300	2091	2390	15.0	-4512	False	AATAAA	-14
PB.2632.2	chr12	+	3921	1	novel_in_catalog	PFDN5	novel	847	6	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	B	coding	130	393	43	435	15.0	-4505	False	AATAAA	-15
PB.2632.3	chr12	+	2612	3	novel_in_catalog	PFDN5	novel	847	6	NA	NA	1	4	intron_retention	FALSE	canonical	1	5876834	junction_2	107181.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-4505	False	AATAAA	-23
PB.10985.1	chr8	+	2032	7	incomplete-splice_match	FDFT1	ENST00000220584.8	2176	8	103	6758	-25	757	3prime_fragment	FALSE	canonical	1	2107054	junction_1	246299.70905224842	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	120	1346	100.0	-6427	False	NA	NA
PB.2175.1	chr11	-	3235	6	full-splice_match	THAP12	ENST00000528993.5	882	6	185	-2538	156	-4	multi-exon	FALSE	canonical	1	861	junction_1	30252.32474108395	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	571	2331	35.0	345	False	AATAAA	-15
PB.2175.2	chr11	-	3227	5	full-splice_match	THAP12	ENST00000260045.7	3300	5	77	-4	77	4	multi-exon	FALSE	canonical	1	861	junction_1	33377.9592171241	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	30	2315	20.0	266	False	AATAAA	-23
PB.2175.3	chr11	-	2195	1	incomplete-splice_match	THAP12	ENST00000529901.1	6795	2	7419	4	7419	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	422	1269	23	1291	35.0	NA	False	AATAAA	-15
PB.349.2	chr1	-	3115	8	full-splice_match	ELOVL1	ENST00000470769.5	1215	8	-1426	-474	5	-3	multi-exon	FALSE	canonical	1	78605	junction_7	522990.2574817397	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	1761	2600	15.0	-3	True	ATTAAA	-18
PB.6967.3	chr2	-	3741	20	novel_not_in_catalog	NDUFS1	novel	11819	19	NA	NA	-15	1139	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	265234.1128849721	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	105	2288	20.0	-16	True	AATACA	-16
PB.7023.7	chr2	-	3718	15	full-splice_match	ATG9A	ENST00000396761.6	3799	15	80	1	-1	-1	multi-exon	FALSE	canonical	1	34851	junction_14	124947.19841966634	NA	1	NA	TRUE	NA	NA	NA	C	coding	839	2520	133	2652	5.0	-9	True	AATAAA	-17
PB.7023.6	chr2	-	3768	16	full-splice_match	ATG9A	ENST00000361242.8	3130	16	35	-673	1	-1	multi-exon	FALSE	canonical	1	89937	junction_15	120011.8129095632	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	183	2702	5.0	-7	True	AATAAA	-17
PB.7023.5	chr2	-	3881	16	novel_in_catalog	AC068946.2	novel	5245	22	NA	NA	-6897	-9609	no_combination_of_known_junctions	FALSE	canonical	1	15787	junction_14	160744.4711032043	NA	1	NA	TRUE	NA	NA	NA	B	coding	839	2520	296	2815	5.0	-7	True	AATAAA	-17
PB.6967.2	chr2	-	3847	20	novel_not_in_catalog	NDUFS1	novel	11819	19	NA	NA	-11	1139	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	265234.1128849721	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	101	2284	20.0	-12	True	AATACA	-16
PB.7023.3	chr2	-	3962	17	novel_in_catalog	AC068946.2	novel	5245	22	NA	NA	-6926	-9609	no_combination_of_known_junctions	FALSE	canonical	1	36513	junction_16	146700.4520700553	NA	0	NA	TRUE	NA	NA	NA	B	coding	839	2520	377	2896	5.0	9087	False	AATAAA	-17
PB.852.34	chr1	-	4354	33	full-splice_match	COPA	ENST00000368069.7	4664	33	-26	336	-1	6	multi-exon	FALSE	canonical	1	63048	junction_17	380322.4268874934	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	105	3806	90.0	-28	True	NA	NA
PB.7275.8	chr20	-	4355	9	incomplete-splice_match	DSN1	ENST00000473615.5	2075	12	1	278	1	-278	intron_retention	FALSE	canonical	1	188689	junction_8	73588.27871923201	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	2618	3640	70.0	-34	True	NA	NA
PB.7023.9	chr2	-	3889	15	novel_in_catalog	AC068946.2	novel	5245	22	NA	NA	-6605	-9610	no_combination_of_known_junctions	FALSE	canonical	1	15787	junction_14	163142.5768831093	NA	1	1	TRUE	NA	NA	NA	B	coding	528	1587	364	1950	5.0	0	True	AATAAA	-16
PB.7275.9	chr20	-	1903	11	full-splice_match	DSN1	ENST00000373750.8	2233	11	52	278	-3	-278	multi-exon	FALSE	canonical	1	135298	junction_10	86946.29259974229	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	118	1188	70.0	-1	True	NA	NA
PB.3504.3	chr14	-	3234	3	full-splice_match	MAX	ENST00000556443.5	585	3	-1	-2648	1	1	multi-exon	FALSE	canonical	1	395707	junction_2	353768.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	180	557	5.0	-2	True	AATAAA	-18
PB.4018.1	chr15	-	2056	12	full-splice_match	CTSH	ENST00000220166.9	2190	12	49	85	0	-85	multi-exon	FALSE	canonical	1	535134	junction_11	344119.3770589954	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	62	1069	40.0	3	True	GATAAA	-34
PB.4018.2	chr15	-	1422	12	full-splice_match	CTSH	ENST00000220166.9	2190	12	74	694	4	13	multi-exon	FALSE	canonical	1	535134	junction_11	344119.3770589954	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	37	1044	30.0	28	True	AATAAA	-41
PB.4018.3	chr15	-	4006	11	novel_in_catalog	CTSH	novel	2190	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	535134	junction_10	360183.88216165366	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	3009	3641	10.0	5	False	AATAAA	-28
PB.4018.4	chr15	-	1566	12	novel_in_catalog	CTSH	novel	2190	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	26622	junction_11	451456.20907806826	NA	4	NA	TRUE	NA	NA	NA	C	coding	297	894	309	1202	15.0	-17	True	AATAAA	-27
PB.4018.5	chr15	-	1992	12	novel_in_catalog	CTSH	novel	2190	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	6402	junction_6	488277.25107171317	NA	3	NA	TRUE	NA	NA	NA	C	coding	201	606	1023	1628	15.0	31	False	AATAAA	-27
PB.3504.4	chr14	-	2208	6	novel_in_catalog	MAX	novel	330	4	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	1	14926	junction_3	418694.3899727342	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	237	602	5.0	-37	False	AATAAA	-18
PB.3239.1	chr13	+	6660	3	incomplete-splice_match	CLYBL	ENST00000376354.5	1127	7	-28	26376	-7	-1	intron_retention	FALSE	canonical	1	55325	junction_1	22944.5	NA	7	NA	TRUE	NA	NA	NA	B	coding	149	450	35	484	15.0	-28	True	AATAAA	-21
PB.3239.2	chr13	+	2667	3	novel_not_in_catalog	CLYBL	novel	6771	8	NA	NA	0	-59142	any annotated donor/acceptor	FALSE	canonical	1	659	junction_2	27333.0	NA	5	NA	TRUE	NA	NA	NA	B	coding	131	396	28	423	20.0	-21	True	NA	NA
PB.3504.8	chr14	-	2149	7	novel_not_in_catalog	MAX	novel	330	4	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	3244	junction_6	382243.6380793523	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	217	528	0.0	-162	False	AATAAA	-17
PB.473.1	chr1	+	1745	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-4	64	-4	-64	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	149	1366	30.0	0	True	TTTAAA	-17
PB.11538.17	chr9	+	2365	17	full-splice_match	MELK	ENST00000543751.5	2400	17	32	3	-1	-1	multi-exon	FALSE	canonical	1	94015	junction_2	92439.60528028557	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	166	2022	10.0	-3	True	AATAAA	-15
PB.473.2	chr1	+	2239	12	full-splice_match	CTH	ENST00000370938.7	1805	12	-57	-377	-3	96	multi-exon	FALSE	canonical	1	116798	junction_1	26256.731578274434	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	202	1419	75.0	1	True	NA	NA
PB.10124.11	chr6	-	2176	11	novel_in_catalog	PNISR	novel	5189	13	NA	NA	2	533	no_combination_of_known_junctions	FALSE	canonical	1	72770	junction_2	384062.7646005402	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1977	200	2176	75.0	1	True	NA	NA
PB.10124.12	chr6	-	3457	9	novel_in_catalog	PNISR	novel	5189	13	NA	NA	0	-2	intron_retention	FALSE	canonical	1	151384	junction_8	321223.34018247237	NA	4	1	TRUE	NA	NA	NA	C	coding	413	1242	126	1367	75.0	-1	True	AATGAA	-31
PB.10124.13	chr6	-	3529	10	novel_in_catalog	PNISR	novel	5189	13	NA	NA	-2	-12	intron_retention	FALSE	canonical	1	597170	junction_8	191877.15814899214	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	208	1449	75.0	-3	True	AATGAA	-42
PB.10124.14	chr6	-	2441	11	full-splice_match	PNISR	ENST00000478777.5	2422	11	-32	13	-9	-12	multi-exon	FALSE	canonical	1	597170	junction_9	188989.52115458675	NA	2	1	TRUE	NA	NA	NA	C	coding	413	1242	238	1479	75.0	-33	False	AATGAA	-42
PB.10124.15	chr6	-	1692	12	full-splice_match	PNISR	ENST00000369239.9	5112	12	-3	3423	-3	-12	multi-exon	FALSE	canonical	1	597170	junction_10	186128.88172069116	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1482	209	1690	75.0	-4	True	AATGAA	-42
PB.10124.16	chr6	-	1629	11	novel_in_catalog	PNISR	novel	5189	13	NA	NA	6	-12	combination_of_known_junctions	FALSE	canonical	1	72770	junction_2	320870.3453008551	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1428	200	1627	75.0	5	True	AATGAA	-42
PB.5277.1	chr17	-	3466	2	full-splice_match	SRSF2	ENST00000392485.2	2885	2	-596	15	-555	-7	multi-exon	FALSE	canonical	1	1718073	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	806	1435	25.0	-38	False	ATTAAA	-16
PB.10124.18	chr6	-	3389	10	novel_in_catalog	PNISR	novel	5189	13	NA	NA	5	-141	intron_retention	FALSE	canonical	1	131206	junction_8	308488.7057816534	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	197	1438	55.0	4	True	AAGAAA	-23
PB.10124.19	chr6	-	3369	9	novel_in_catalog	PNISR	novel	5189	13	NA	NA	-2	-1081	intron_retention	FALSE	canonical	1	597170	junction_7	134298.5665839364	NA	3	NA	TRUE	NA	NA	NA	C	coding	413	1242	208	1449	30.0	-3	True	GATAAA	-8
PB.11236.5	chr8	-	4734	3	full-splice_match	RBM12B	ENST00000399300.6	7269	3	-14	2549	-14	-1272	multi-exon	FALSE	canonical	1	26913	junction_2	42466.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	1001	3006	229	3234	75.0	-23	True	NA	NA
PB.11236.4	chr8	-	4814	4	full-splice_match	RBM12B	ENST00000520560.5	588	4	-87	-4139	-26	-1272	multi-exon	FALSE	canonical	1	39045	junction_3	32367.595740184348	NA	2	NA	TRUE	NA	NA	NA	C	coding	1001	3006	309	3314	75.0	17	False	NA	NA
PB.11236.3	chr8	-	5111	3	full-splice_match	RBM12B	ENST00000399300.6	7269	3	9	2149	-7	-872	multi-exon	FALSE	canonical	1	26913	junction_2	42466.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	206	3211	45.0	0	True	AATAAA	-18
PB.2744.4	chr12	-	3051	16	novel_not_in_catalog	MDM1	novel	393	4	NA	NA	23	1	any annotated donor/acceptor	FALSE	canonical	1	6712	junction_12	37091.47901511733	NA	4	NA	TRUE	NA	NA	NA	C	coding	444	1335	1030	2364	20.0	3	True	AATAAA	-15
PB.11236.1	chr8	-	5156	4	full-splice_match	RBM12B	ENST00000520560.5	588	4	-29	-4539	4	-872	multi-exon	FALSE	canonical	1	39045	junction_3	32367.595740184348	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	251	3256	45.0	-1	True	AATAAA	-18
PB.7033.1	chr2	+	3623	25	full-splice_match	STK11IP	ENST00000456909.5	3615	25	-10	2	-10	-2	multi-exon	FALSE	canonical	1	103496	junction_11	24000.41477155337	NA	0	NA	TRUE	NA	NA	NA	C	coding	1088	3267	101	3367	20.0	-18	True	AATAAA	-16
PB.6749.1	chr2	-	3138	3	intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2978	junction_1	388.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	72	False	ATTAAA	-19
PB.8961.16	chr4	-	1745	14	novel_not_in_catalog	ANXA5	novel	1762	13	NA	NA	-9	28	any annotated donor/acceptor	FALSE	canonical	1	6719	junction_7	2189765.211113323	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	178	624	25.0	-25	True	AATAAA	-17
PB.11538.10	chr9	+	2231	16	novel_in_catalog	MELK	novel	2485	18	NA	NA	11	-1	no_combination_of_known_junctions	FALSE	canonical	1	5844	junction_3	124486.99243035617	NA	9	1	TRUE	NA	NA	NA	C	coding	571	1716	173	1888	10.0	-23	True	AATAAA	-15
PB.4624.3	chr16	+	3523	3	incomplete-splice_match	VPS9D1-AS1	ENST00000562866.1	1753	4	0	-1331	0	1331	intron_retention	FALSE	canonical	1	84179	junction_2	1609.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	186	561	1499	2059	25.0	4	True	NA	NA
PB.5277.4	chr17	-	2268	3	novel_in_catalog	SRSF2	novel	2885	2	NA	NA	0	2	intron_retention	FALSE	canonical	1	458798	junction_1	629637.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	208	837	15.0	-1	True	ATTAAA	-29
PB.4624.1	chr16	+	2823	4	novel_in_catalog	VPS9D1-AS1	novel	1753	4	NA	NA	-6	1331	intron_retention	FALSE	canonical	1	17252	junction_3	32335.131575424275	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	799	1359	25.0	-2	True	NA	NA
PB.10120.1	chr6	+	3574	1	full-splice_match	POU3F2	ENST00000328345.7	4879	1	573	732	573	-732	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	263	792	250	1041	40.0	-7	True	AATAAA	-20
PB.5277.5	chr17	-	2229	4	novel_not_in_catalog	SRSF2	novel	2885	2	NA	NA	20	2	intron_retention	FALSE	canonical	0	0	junction_2	714064.5886290679	NA	2	1	TRUE	NA	NA	NA	C	coding	221	666	195	860	15.0	537	False	ATTAAA	-29
PB.10986.39	chr8	-	2019	11	full-splice_match	CTSB	ENST00000533455.5	2009	11	20	-30	1	-1	multi-exon	FALSE	canonical	1	244599	junction_9	2028350.7039420477	NA	18	1	TRUE	NA	NA	NA	C	coding	339	1020	200	1219	25.0	0	True	AATAAA	-12
PB.2342.1	chr11	-	2871	10	full-splice_match	SIAE	ENST00000263593.7	5583	10	27	2685	27	-9	multi-exon	FALSE	canonical	1	152917	junction_6	59301.91523440989	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	147	1718	25.0	-21	False	AATAAA	-17
PB.2342.2	chr11	-	2601	10	full-splice_match	SIAE	ENST00000263593.7	5583	10	142	2840	82	-164	multi-exon	FALSE	canonical	1	152917	junction_6	59301.91523440989	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	32	1603	65.0	-1	True	AGTAAA	-19
PB.6857.4	chr2	-	1981	3	full-splice_match	HAGLR	ENST00000643050.1	3767	3	0	1786	0	725	multi-exon	FALSE	canonical	1	12498	junction_2	16537.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	370	False	AATAAA	-14
PB.5277.7	chr17	-	1386	4	full-splice_match	SRSF2	ENST00000585202.5	1359	4	-23	-4	0	0	multi-exon	FALSE	canonical	1	575019	junction_1	734457.0567751997	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	172	837	20.0	-1	True	ATTAAA	-27
PB.3572.1	chr14	+	2107	4	full-splice_match	FOS	ENST00000303562.8	2158	4	50	1	-2	-1	multi-exon	FALSE	canonical	1	3798410	junction_2	662242.9637547437	NA	0	NA	TRUE	NA	NA	NA	A	coding	380	1143	160	1302	15.0	-4	True	AATAAA	-20
PB.1022.2	chr1	+	4561	30	full-splice_match	PTPRC	ENST00000348564.11	4753	30	110	82	5	-82	multi-exon	FALSE	canonical	1	214755	junction_3	339037.8226913115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1145	3438	104	3541	25.0	-17	True	ATTAAA	-19
PB.6544.10	chr2	+	4111	22	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	-1	11751	1	-3296	3prime_fragment	FALSE	canonical	1	110631	junction_1	85723.31008234531	NA	0	NA	TRUE	NA	NA	NA	C	coding	1265	3795	316	4110	50.0	-19	True	NA	NA
PB.11777.6	chr9	+	4966	26	novel_not_in_catalog	RABGAP1	novel	3897	28	NA	NA	0	-65	any annotated donor/acceptor	FALSE	canonical	1	4785	junction_3	113592.48197880703	NA	1	NA	TRUE	NA	NA	NA	C	coding	899	2700	679	3378	10.0	0	True	AGTAAA	-6
PB.6857.1	chr2	-	3871	4	full-splice_match	HAGLR	ENST00000642267.1	3821	4	-5	-45	-5	1	multi-exon	FALSE	canonical	1	3511	junction_2	19688.770521966744	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-1	True	AATAAA	-26
PB.11777.5	chr9	+	2518	19	incomplete-splice_match	RABGAP1	ENST00000373647.8	4997	26	6	28138	-5	-271	3prime_fragment	FALSE	canonical	1	51684	junction_1	67331.75554422049	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2388	129	2516	60.0	-5	True	AAGAAA	-5
PB.9756.24	chr6	+	3891	13	incomplete-splice_match	JARID2	ENST00000397311.4	5595	18	238451	970	-14052	-951	5prime_fragment	FALSE	canonical	1	178449	junction_1	75258.69751116072	NA	0	NA	TRUE	NA	NA	NA	C	coding	935	2808	265	3072	95.0	-7129	False	NA	NA
PB.9979.2	chr6	+	3784	10	novel_not_in_catalog	NFYA	novel	3811	10	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	42647	junction_2	99830.32382714232	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	197	1222	40.0	-25	True	AATAAA	-17
PB.11777.4	chr9	+	4594	20	novel_not_in_catalog	RABGAP1	novel	3897	28	NA	NA	0	6669	any annotated donor/acceptor	FALSE	canonical	1	5244	junction_19	92101.05731275523	NA	4	NA	TRUE	NA	NA	NA	C	coding	850	2553	130	2682	40.0	-11	True	AATAAA	-15
PB.6857.3	chr2	-	3325	3	full-splice_match	HAGLR	ENST00000643050.1	3767	3	42	400	-3	12	multi-exon	FALSE	canonical	1	12498	junction_2	16537.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	AATGAA	-13
PB.1043.2	chr1	-	2118	9	novel_in_catalog	ADIPOR1	novel	2177	8	NA	NA	-8	-27	combination_of_known_junctions	FALSE	canonical	1	20510	junction_8	606609.0677685259	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	271	1398	40.0	-14	True	AATAAA	-10
PB.5707.1	chr19	-	2664	18	full-splice_match	KRI1	ENST00000478863.5	2545	18	-134	15	-68	0	multi-exon	FALSE	canonical	1	244075	junction_17	88812.89285971224	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	107	1837	90.0	2921	False	NA	NA
PB.5707.2	chr19	-	2649	19	full-splice_match	KRI1	ENST00000312962.10	3023	19	-139	513	-139	0	multi-exon	FALSE	canonical	1	244075	junction_18	91061.19427644505	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	178	2289	90.0	2850	False	NA	NA
PB.5707.3	chr19	-	3245	17	full-splice_match	KRI1	ENST00000536689.5	3744	17	-7	506	4	0	multi-exon	FALSE	canonical	1	244075	junction_16	84469.25736168382	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	1024	2418	90.0	5	True	NA	NA
PB.349.3	chr1	-	1478	8	full-splice_match	ELOVL1	ENST00000372458.7	1477	8	-7	6	0	-5	multi-exon	FALSE	canonical	1	767596	junction_7	347398.23284677375	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	126	965	20.0	-15	True	ATTAAA	-16
PB.1022.3	chr1	+	2057	20	incomplete-splice_match	PTPRC	ENST00000348564.11	4753	30	72	22035	-6	-4	3prime_fragment	FALSE	canonical	1	214755	junction_3	316713.8986650272	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	142	2055	25.0	-55	True	NA	NA
PB.6476.24	chr2	-	4034	16	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-5	1	any annotated donor/acceptor	FALSE	canonical	1	14733	junction_12	132923.93417149023	NA	4	NA	TRUE	NA	NA	NA	C	coding	721	2166	335	2500	15.0	-16	True	ATTAAA	-21
PB.11777.1	chr9	+	4807	26	novel_in_catalog	RABGAP1	novel	3897	28	NA	NA	-10	-57	no_combination_of_known_junctions	FALSE	canonical	1	3148	junction_1	99300.01325437978	NA	3	NA	TRUE	NA	NA	NA	C	coding	1001	3006	206	3211	5.0	-9402	False	AGTAAA	-14
PB.6604.2	chr2	+	3365	23	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	0	1313	intron_retention	FALSE	canonical	1	92112	junction_3	150877.48378310486	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	26	1189	15.0	-12	True	AATATA	-34
PB.109.2	chr1	+	2512	10	full-splice_match	DDI2	ENST00000480945.5	10625	10	-79	8192	-79	-205	multi-exon	FALSE	canonical	1	123536	junction_1	32090.14525356752	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	251	1450	15.0	0	True	AATAAA	-13
PB.109.3	chr1	+	3693	10	full-splice_match	DDI2	ENST00000480945.5	10625	10	-78	7010	-78	977	multi-exon	FALSE	canonical	1	123536	junction_1	32090.14525356752	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	1528	3381	35.0	1	True	AATAAA	-24
PB.109.1	chr1	+	3965	10	full-splice_match	DDI2	ENST00000480945.5	10625	10	-98	6758	-98	1229	multi-exon	FALSE	canonical	1	123536	junction_1	32090.14525356752	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	1548	3401	20.0	-870	False	NA	NA
PB.109.4	chr1	+	6093	10	full-splice_match	DDI2	ENST00000480945.5	10625	10	-78	4610	-78	3377	multi-exon	FALSE	canonical	1	123536	junction_1	32090.14525356752	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	1528	3381	85.0	1	True	NA	NA
PB.109.5	chr1	+	6015	9	novel_in_catalog	DDI2	novel	10625	10	NA	NA	-63	3377	no_combination_of_known_junctions	FALSE	canonical	1	8274	junction_8	58702.00186961259	NA	0	NA	TRUE	NA	NA	NA	C	coding	1022	3069	235	3303	85.0	-21	True	NA	NA
PB.470.28	chr1	+	2435	12	incomplete-splice_match	SRSF11	ENST00000370950.7	3784	13	15738	1442	-7	-7	5prime_fragment	FALSE	canonical	1	634180	junction_2	492723.3546397222	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	176	1630	75.0	-18	True	NA	NA
PB.470.29	chr1	+	4727	1	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-4	-2536	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-15	True	NA	NA
PB.6755.4	chr2	-	3669	20	novel_not_in_catalog	ZRANB3	novel	2572	14	NA	NA	-17	-343	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	14226.19239057022	NA	3	1	TRUE	NA	NA	NA	B	coding	1019	3060	274	3333	35.0	-33	True	TTTAAA	-21
PB.470.27	chr1	+	5006	9	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-8	-345	intron_retention	FALSE	canonical	1	826266	junction_2	369344.3559883344	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	801	4204	5004	40.0	-19	True	AAGAAA	-28
PB.8338.6	chr3	+	2776	7	full-splice_match	CD86	ENST00000393627.6	1405	7	-45	-1326	1	7	multi-exon	FALSE	canonical	1	33628	junction_1	52038.6716952456	NA	2	NA	TRUE	NA	NA	NA	C	coding	323	972	193	1164	10.0	-18	True	AATAAA	-26
PB.470.25	chr1	+	4811	7	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-8	-5586	intron_retention	FALSE	canonical	1	826266	junction_2	355738.5201524038	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	606	4204	4809	50.0	-19	True	NA	NA
PB.470.22	chr1	+	1100	8	incomplete-splice_match	SRSF11	ENST00000395136.6	1408	11	64	5586	-9	-5586	3prime_fragment	FALSE	canonical	1	634180	junction_2	400530.5430031624	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	921	178	1098	50.0	-20	True	NA	NA
PB.10459.37	chr7	+	2417	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	455614.29980404873	NA	1	1	TRUE	NA	NA	NA	C	coding	489	1470	98	1567	90.0	-2	True	AATATA	-11
PB.6635.9	chr2	+	3993	17	novel_in_catalog	NCAPH	novel	2763	18	NA	NA	0	-7	intron_retention	FALSE	canonical	1	84738	junction_1	60970.56348238365	NA	1	1	TRUE	NA	NA	NA	C	coding	566	1701	30	1730	35.0	0	True	AATAAA	-21
PB.6755.3	chr2	-	3962	20	novel_not_in_catalog	ZRANB3	novel	2572	14	NA	NA	-18	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	15862.485206810694	NA	15	2	TRUE	NA	NA	NA	B	coding	1019	3060	242	3301	65.0	-34	True	ATTAAA	-7
PB.6653.5	chr2	+	1622	8	incomplete-splice_match	EIF5B	ENST00000617677.1	4698	25	6	30817	6	-21242	3prime_fragment	FALSE	canonical	1	733278	junction_5	124376.18003772068	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1443	179	1621	50.0	-12	True	NA	NA
PB.4619.3	chr16	+	3640	16	novel_in_catalog	CPNE7	novel	2657	17	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	12578	junction_2	54605.6575321235	NA	14	NA	TRUE	NA	NA	NA	C	coding	253	762	426	1187	10.0	4	True	AATAAA	-18
PB.4619.2	chr16	+	2438	15	full-splice_match	CPNE7	ENST00000319518.12	2409	15	-30	1	-7	-1	multi-exon	TRUE	canonical	1	43681	junction_9	43265.2921994298	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	138	1814	10.0	3	True	AATAAA	-19
PB.4619.1	chr16	+	4166	16	novel_not_in_catalog	CPNE7	novel	2657	17	NA	NA	-39	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	54927.915713192284	NA	5	NA	TRUE	NA	NA	NA	C	coding	321	966	170	1135	10.0	-29	True	AATAAA	-19
PB.6636.1	chr2	-	1507	4	full-splice_match	NEURL3	ENST00000451794.5	1461	4	-47	1	-47	-1	multi-exon	FALSE	canonical	1	19779	junction_3	9965.782090065319	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	119	907	15.0	196	False	AATAAA	-19
PB.6636.2	chr2	-	2402	3	novel_in_catalog	NEURL3	novel	1461	4	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	19779	junction_2	6404.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	83	934	15.0	232	False	AATAAA	-19
PB.5975.1	chr19	+	1312	7	full-splice_match	PSMD8	ENST00000602911.5	1330	7	-1	19	0	-18	multi-exon	FALSE	canonical	1	923597	junction_1	754233.6455484136	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	34	897	45.0	-6186	False	AATAAA	-15
PB.6317.6	chr2	+	5109	15	novel_in_catalog	GREB1	novel	8484	33	NA	NA	-41	-3	no_combination_of_known_junctions	FALSE	canonical	1	3089	junction_1	46312.46151365831	NA	4	NA	TRUE	NA	NA	NA	C	coding	895	2688	76	2763	15.0	0	True	AATAAA	-12
PB.1455.1	chr10	+	2252	6	full-splice_match	SLC29A3	ENST00000373189.6	2256	6	2	2	-1	-2	multi-exon	FALSE	canonical	1	38945	junction_1	14134.139359720491	NA	0	NA	TRUE	NA	NA	NA	A	coding	475	1428	50	1477	30.0	2	True	AATAAA	-14
PB.11063.8	chr8	+	2245	10	novel_in_catalog	HMBOX1	novel	3184	10	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	1	32558	junction_8	34857.62602818769	NA	1	NA	TRUE	NA	NA	NA	B	coding	419	1260	243	1502	100.0	-1251	False	NA	NA
PB.6317.4	chr2	+	5160	16	full-splice_match	GREB1	ENST00000396123.2	5296	16	4	132	4	-130	multi-exon	FALSE	canonical	1	3089	junction_1	35815.60026295183	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	115	2958	30.0	-2	True	AATAAA	-21
PB.28.5	chr1	-	1866	1	novel_in_catalog	SLC35E2B	novel	2156	7	NA	NA	6795	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-4136	False	AATAAA	-13
PB.6317.5	chr2	+	5252	16	full-splice_match	GREB1	ENST00000396123.2	5296	16	43	1	-41	1	multi-exon	FALSE	canonical	1	3089	junction_1	35815.60026295183	NA	2	NA	TRUE	NA	NA	NA	C	coding	947	2844	76	2919	15.0	0	True	AATAAA	-16
PB.10978.14	chr8	+	9621	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	0	-1	0	1	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	3	NA	TRUE	NA	NA	NA	C	coding	1327	3984	27	4010	25.0	0	True	AATAAA	-17
PB.6317.2	chr2	+	5278	16	novel_not_in_catalog	GREB1	novel	8484	33	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	578	junction_1	36337.94949244599	NA	2	NA	TRUE	NA	NA	NA	C	coding	947	2844	101	2944	10.0	0	True	AATAAA	-17
PB.10986.35	chr8	-	1823	9	novel_in_catalog	CTSB	novel	660	4	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	34075	junction_3	1789773.7828456142	NA	3	NA	TRUE	NA	NA	NA	C	coding	291	876	137	1012	25.0	-25	False	AATAAA	-23
PB.6317.3	chr2	+	5147	16	novel_not_in_catalog	GREB1	novel	8484	33	NA	NA	-18	-129	any annotated donor/acceptor	TRUE	canonical	1	578	junction_1	36337.94949244599	NA	2	NA	TRUE	NA	NA	NA	C	coding	947	2844	101	2944	25.0	0	True	AATAAA	-22
PB.3882.4	chr15	-	1359	6	full-splice_match	RSL24D1	ENST00000260443.8	2015	6	139	517	-14	-517	multi-exon	FALSE	canonical	1	422883	junction_1	284662.3171418374	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	96	530	45.0	7	True	AATAAA	-8
PB.3882.1	chr15	-	1903	6	full-splice_match	RSL24D1	ENST00000260443.8	2015	6	121	-9	-32	9	multi-exon	TRUE	canonical	1	422883	junction_1	284662.3171418374	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	114	548	35.0	-11	True	AATAAA	-24
PB.3882.2	chr15	-	1537	6	full-splice_match	RSL24D1	ENST00000260443.8	2015	6	97	381	-56	-381	multi-exon	FALSE	canonical	1	422883	junction_1	284662.3171418374	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	138	572	25.0	-35	False	ATTAAA	-16
PB.3882.3	chr15	-	3043	5	novel_in_catalog	RSL24D1	novel	2015	6	NA	NA	-22	-513	intron_retention	FALSE	canonical	1	422883	junction_1	285285.23445229337	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-12
PB.11029.3	chr8	+	2779	1	novel_in_catalog	AC055854.1	novel	570	5	NA	NA	-25214	-23555	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	67	204	134	337	65.0	-89	False	NA	NA
PB.4347.5	chr16	+	2138	5	novel_not_in_catalog	AC009086.2	novel	610	3	NA	NA	15903	3553	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	227386.78572973408	NA	0	NA	TRUE	NA	NA	NA	A	coding	303	912	17	928	20.0	2	True	NA	NA
PB.4347.4	chr16	+	1146	4	full-splice_match	QPRT	ENST00000395384.8	2343	4	140	1057	-5	118	multi-exon	FALSE	canonical	1	372770	junction_2	120117.9138245231	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	22	915	20.0	-3	True	NA	NA
PB.4347.3	chr16	+	1852	4	full-splice_match	QPRT	ENST00000395384.8	2343	4	131	360	-14	344	multi-exon	FALSE	canonical	1	372770	junction_2	120117.9138245231	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	31	924	75.0	-12	True	NA	NA
PB.4347.2	chr16	+	2216	4	full-splice_match	QPRT	ENST00000395384.8	2343	4	125	2	-20	-2	multi-exon	FALSE	canonical	1	372770	junction_2	120117.9138245231	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	37	930	20.0	-18	True	NA	NA
PB.4347.1	chr16	+	1525	4	full-splice_match	QPRT	ENST00000395384.8	2343	4	103	715	-42	-11	multi-exon	FALSE	canonical	1	372770	junction_2	120117.9138245231	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	59	952	70.0	-40	True	NA	NA
PB.10908.1	chr7	-	3111	3	full-splice_match	ZNF786	ENST00000316286.13	3144	3	35	-2	35	2	multi-exon	FALSE	canonical	1	19042	junction_2	21439.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	239	2329	95.0	-30	False	NA	NA
PB.10908.2	chr7	-	2802	3	full-splice_match	ZNF786	ENST00000316286.13	3144	3	35	307	35	13	multi-exon	FALSE	canonical	1	19042	junction_2	21439.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	696	2091	239	2329	60.0	-30	False	TATAAA	-39
PB.10908.3	chr7	-	2952	4	full-splice_match	ZNF786	ENST00000491431.1	2874	4	-66	-12	11	12	multi-exon	FALSE	canonical	1	16268	junction_3	19602.188726999055	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2349	132	2480	55.0	-54	False	TATAAA	-38
PB.10978.13	chr8	+	4118	28	novel_not_in_catalog	TNKS	novel	1964	11	NA	NA	0	-4261	any annotated donor/acceptor	FALSE	canonical	1	13259	junction_27	53827.89944179041	NA	0	NA	TRUE	NA	NA	NA	C	coding	1316	3951	27	3977	40.0	0	True	NA	NA
PB.3387.1	chr14	+	994	7	full-splice_match	PSMA6	ENST00000261479.8	1029	7	39	-4	1	0	multi-exon	FALSE	canonical	1	336592	junction_5	394534.3536438099	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	82	822	10.0	4	True	AATAAA	-26
PB.6786.2	chr2	-	3810	24	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	-2	979	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	357914.5164639589	NA	3	1	TRUE	NA	NA	NA	B	coding	719	2160	672	2831	25.0	-1	True	ATTAAA	-18
PB.10978.12	chr8	+	4351	26	incomplete-splice_match	TNKS	ENST00000310430.10	9620	27	0	11656	0	-6239	3prime_fragment	FALSE	canonical	1	105564	junction_14	37507.20012571453	NA	1	NA	TRUE	NA	NA	NA	C	coding	1323	3972	27	3998	75.0	0	True	AAAACA	-45
PB.10991.4	chr8	-	3714	13	novel_in_catalog	DLC1	novel	7447	18	NA	NA	6	-1	no_combination_of_known_junctions	FALSE	canonical	1	2783	junction_11	65227.690639959204	NA	0	NA	TRUE	NA	NA	NA	C	coding	1017	3054	444	3497	80.0	0	True	NA	NA
PB.10991.5	chr8	-	3677	14	full-splice_match	DLC1	ENST00000358919.6	4392	14	185	530	0	-126	multi-exon	FALSE	canonical	1	100666	junction_13	38984.30448361245	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3276	310	3585	65.0	-6	True	NA	NA
PB.11953.20	chrX	-	2448	2	novel_in_catalog	BX890604.2	novel	3629	13	NA	NA	-22	-45	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	70	213	434	646	70.0	NA	False	NA	NA
PB.11953.21	chrX	-	2524	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-25	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	84.00571409136404	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1673	2014	75.0	NA	False	NA	NA
PB.4860.11	chr17	+	2093	6	novel_in_catalog	TRAF4	novel	2923	7	NA	NA	2	41	intron_retention	FALSE	canonical	1	471626	junction_1	154934.71304856119	NA	17	1	TRUE	NA	NA	NA	C	coding	205	618	975	1592	20.0	10	True	AATAAA	-19
PB.4860.10	chr17	+	2006	7	full-splice_match	TRAF4	ENST00000262395.9	2923	7	37	880	2	41	multi-exon	FALSE	canonical	1	471626	junction_1	143492.07383065528	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	93	1505	20.0	10	True	AATAAA	-19
PB.4860.12	chr17	+	2364	5	incomplete-splice_match	TRAF4	ENST00000444415.7	1456	8	-13	-40	-3	40	intron_retention	FALSE	canonical	1	471626	junction_1	162960.99305201843	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	1247	1864	20.0	16	True	AATAAA	-18
PB.5961.2	chr19	-	6306	6	novel_not_in_catalog	AC012309.1	novel	389	4	NA	NA	-23	-16194	intron_retention	FALSE	non_canonical	0	0	junction_5	20649.13966633961	NA	3	NA	TRUE	NA	NA	NA	B	coding	754	2265	392	2656	5.0	-31	True	NA	NA
PB.5961.3	chr19	-	6190	5	novel_not_in_catalog	AC012309.1	novel	389	4	NA	NA	-34	-16201	intron_retention	FALSE	canonical	0	0	junction_4	22941.118797641495	NA	3	1	TRUE	NA	NA	NA	B	coding	769	2310	238	2547	25.0	-42	True	NA	NA
PB.5961.1	chr19	-	6024	6	novel_in_catalog	AC012309.1	novel	389	4	NA	NA	-35	-16192	no_combination_of_known_junctions	FALSE	canonical	1	10220	junction_4	17961.45559134894	NA	2	NA	TRUE	NA	NA	NA	B	coding	583	1752	621	2372	15.0	-43	True	NA	NA
PB.5961.6	chr19	-	2720	4	novel_not_in_catalog	AC012309.1	novel	389	4	NA	NA	-22	-19439	intron_retention	FALSE	non_canonical	0	0	junction_3	23952.531200039983	NA	0	NA	TRUE	NA	NA	NA	B	coding	714	2145	171	2315	15.0	-30	True	AATATA	-14
PB.5961.4	chr19	-	6192	5	full-splice_match	ZNF585B	ENST00000532828.6	6210	5	13	5	-5	-5	multi-exon	FALSE	canonical	1	10220	junction_3	19803.737639647723	NA	4	NA	TRUE	NA	NA	NA	A	coding	769	2310	240	2549	25.0	-32	True	NA	NA
PB.5961.5	chr19	-	2947	5	novel_in_catalog	AC012309.1	novel	389	4	NA	NA	-35	-19439	intron_retention	FALSE	canonical	1	10220	junction_3	17482.832670580017	NA	0	NA	TRUE	NA	NA	NA	B	coding	769	2310	233	2542	15.0	-43	True	AATATA	-14
PB.9849.7	chr6	-	3718	20	full-splice_match	PPP1R10	ENST00000376511.6	4525	20	1	806	1	-806	multi-exon	FALSE	canonical	1	35153	junction_19	137203.7308776346	NA	2	NA	TRUE	NA	NA	NA	C	coding	940	2823	553	3375	25.0	-1	True	NA	NA
PB.238.11	chr1	-	2227	8	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	-751	0	any annotated donor/acceptor	FALSE	canonical	1	3544	junction_7	1619674.6792678926	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	170	868	5.0	9761	False	AATAAA	-16
PB.1022.8	chr1	+	4332	32	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-5	-633	combination_of_known_junctions	FALSE	canonical	1	257769	junction_4	352585.275810798	NA	0	NA	TRUE	NA	NA	NA	C	coding	1240	3723	141	3863	15.0	-54	True	AATAAA	-24
PB.536.1	chr1	-	1946	19	full-splice_match	GLMN	ENST00000370360.7	1995	19	-31	80	-20	8	multi-exon	FALSE	canonical	1	103458	junction_16	28880.905966476264	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	114	1898	30.0	1	True	AATAAA	-28
PB.238.10	chr1	-	2388	8	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	1035	0	any annotated donor/acceptor	FALSE	canonical	1	25699	junction_7	1612535.6360394848	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	142	1029	5.0	9282	False	AATAAA	-16
PB.957.7	chr1	+	5444	19	full-splice_match	RALGPS2	ENST00000367634.6	7512	19	111	1957	93	-219	multi-exon	FALSE	canonical	1	105634	junction_14	35017.54892114016	NA	7	NA	TRUE	NA	NA	NA	C	coding	557	1674	246	1919	40.0	14	True	AATAAA	-17
PB.11625.85	chr9	-	3537	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_3	700423.8496702864	NA	3	1	TRUE	NA	NA	NA	B	coding	394	1185	1859	3043	10.0	0	True	AATAAA	-10
PB.238.12	chr1	-	2182	8	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	-2584	0	any annotated donor/acceptor	FALSE	canonical	1	665	junction_7	1620602.7982684562	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	125	823	5.0	9258	False	AATAAA	-16
PB.7368.13	chr20	-	1793	9	full-splice_match	AURKA	ENST00000395915.7	2114	9	50	271	21	4	multi-exon	FALSE	canonical	1	110603	junction_8	145395.03155622058	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	85	1296	10.0	-32	False	AATAAA	-19
PB.7368.12	chr20	-	1871	10	full-splice_match	AURKA	ENST00000312783.10	2223	10	81	271	1	4	multi-exon	FALSE	canonical	1	66051	junction_9	150229.76004995374	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	163	1374	10.0	0	True	AATAAA	-19
PB.7368.11	chr20	-	1984	11	novel_in_catalog	AURKA	novel	2238	10	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	14243	junction_9	158500.61068260905	NA	3	1	TRUE	NA	NA	NA	C	coding	403	1212	276	1487	10.0	-1	True	AATAAA	-19
PB.7368.10	chr20	-	2184	11	novel_in_catalog	AURKA	novel	2238	10	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	14243	junction_9	158450.16924118446	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	476	1687	10.0	10	True	AATAAA	-19
PB.1022.9	chr1	+	3847	33	full-splice_match	PTPRC	ENST00000442510.7	5390	33	34	1509	-5	-1316	multi-exon	FALSE	canonical	1	197273	junction_3	370576.94417771033	NA	0	NA	TRUE	NA	NA	NA	C	coding	1235	3705	141	3845	65.0	-54	True	NA	NA
PB.2458.1	chr12	-	3983	1	novel_in_catalog	DDX12P	novel	2947	27	NA	NA	19	-25555	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-17	True	NA	NA
PB.8589.31	chr3	+	4190	7	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9631	junction_1	243397.37516707575	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	222	1442	15.0	-4	True	AATAAA	-18
PB.10840.15	chr7	-	2526	5	incomplete-splice_match	TMEM209	ENST00000473456.5	1961	14	-28	33875	-28	2030	3prime_fragment	FALSE	canonical	1	121259	junction_4	81591.0593796128	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	57	668	15.0	-26	True	TATAAA	-14
PB.10840.14	chr7	-	2088	15	full-splice_match	TMEM209	ENST00000397622.6	3545	15	85	1372	-10	-9	multi-exon	FALSE	canonical	1	121259	junction_14	51760.57419622051	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	39	1724	50.0	-8	True	NA	NA
PB.8720.8	chr4	+	3944	11	novel_not_in_catalog	AC104662.2	novel	1388	10	NA	NA	73348	2707	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	95231.73919597393	NA	3	NA	TRUE	NA	NA	NA	C	coding	481	1446	154	1599	35.0	-22	True	ATTAAA	-9
PB.10840.16	chr7	-	2138	5	incomplete-splice_match	TMEM209	ENST00000473456.5	1961	14	-11	34246	-11	1659	3prime_fragment	FALSE	canonical	1	121259	junction_4	81591.0593796128	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	40	651	60.0	-9	True	AATAAA	-9
PB.12055.1	chrX	+	3757	5	novel_in_catalog	ZNF81	novel	7933	6	NA	NA	3	-4074	no_combination_of_known_junctions	FALSE	canonical	1	11989	junction_1	13377.270412438405	NA	1	NA	TRUE	NA	NA	NA	C	coding	661	1986	267	2252	65.0	-19	True	NA	NA
PB.10840.13	chr7	-	2463	15	full-splice_match	TMEM209	ENST00000397622.6	3545	15	87	995	-8	368	multi-exon	FALSE	canonical	1	121259	junction_14	51760.57419622051	NA	1	NA	TRUE	NA	NA	NA	C	coding	561	1686	37	1722	10.0	-6	True	AAGAAA	-23
PB.12055.2	chrX	+	3835	6	full-splice_match	ZNF81	ENST00000376954.5	7933	6	22	4076	-22	-4076	multi-exon	FALSE	canonical	1	242	junction_2	19613.744990694664	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	347	2332	60.0	0	True	NA	NA
PB.8720.2	chr4	+	3405	9	novel_in_catalog	AC104662.2	novel	1388	10	NA	NA	73293	1787	no_combination_of_known_junctions	FALSE	canonical	1	2231	junction_1	101116.0212005867	NA	1	NA	TRUE	NA	NA	NA	C	coding	95	288	209	496	10.0	-1082	False	AATAAA	-21
PB.8720.3	chr4	+	3899	11	novel_not_in_catalog	AC104662.2	novel	1388	10	NA	NA	73294	2708	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	95231.73919597393	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	208	1653	35.0	-1081	False	ATTAAA	-10
PB.8720.1	chr4	+	3184	10	full-splice_match	AC104662.2	ENST00000512921.4	1388	10	0	-1796	0	1796	multi-exon	FALSE	canonical	1	2271	junction_1	96222.33253958264	NA	4	NA	TRUE	NA	NA	NA	C	coding	385	1158	112	1269	25.0	-9	True	AATAAA	-30
PB.8720.6	chr4	+	3393	10	novel_not_in_catalog	AC104662.2	novel	1388	10	NA	NA	73442	1784	any annotated donor/acceptor	FALSE	canonical	1	19350	junction_4	95429.64133904499	NA	3	NA	TRUE	NA	NA	NA	C	coding	476	1431	60	1490	15.0	0	True	AATAAA	-18
PB.8720.7	chr4	+	3512	10	novel_not_in_catalog	AC104662.2	novel	1388	10	NA	NA	73347	1778	any annotated donor/acceptor	FALSE	canonical	1	2856	junction_4	99544.70831270605	NA	3	NA	TRUE	NA	NA	NA	C	coding	256	771	155	925	25.0	-23	True	AATAAA	-12
PB.8720.4	chr4	+	3667	10	full-splice_match	PI4K2B	ENST00000264864.7	3540	10	-13	-114	-13	114	multi-exon	FALSE	canonical	1	155094	junction_1	59408.46131052336	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	203	1648	5.0	-1076	False	ATTAAA	-20
PB.8720.5	chr4	+	3312	10	full-splice_match	PI4K2B	ENST00000264864.7	3540	10	8	220	8	-220	multi-exon	FALSE	canonical	1	155094	junction_1	59408.46131052336	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	182	1627	50.0	-1055	False	AATAAA	-24
PB.5670.7	chr19	+	2725	12	novel_not_in_catalog	MAP2K7	novel	3430	11	NA	NA	-1	-716	intron_retention	FALSE	non_canonical	0	0	junction_11	156558.40366346642	NA	8	1	TRUE	NA	NA	NA	C	coding	448	1347	67	1413	80.0	2	True	NA	NA
PB.5670.6	chr19	+	2649	12	full-splice_match	MAP2K7	ENST00000397983.7	3396	12	30	717	8	-717	multi-exon	FALSE	canonical	1	58504	junction_2	121754.98086093349	NA	15	3	TRUE	NA	NA	NA	C	coding	435	1308	31	1338	80.0	-1	True	NA	NA
PB.5670.5	chr19	+	2728	10	novel_in_catalog	MAP2K7	novel	3430	11	NA	NA	-2	-717	intron_retention	FALSE	canonical	1	104610	junction_1	99331.3489217643	NA	5	NA	TRUE	NA	NA	NA	C	coding	449	1350	68	1417	80.0	1	True	NA	NA
PB.5670.4	chr19	+	2660	11	full-splice_match	MAP2K7	ENST00000397981.7	3430	11	34	736	-3	-717	multi-exon	FALSE	canonical	1	16706	junction_8	128749.69946997933	NA	19	2	TRUE	NA	NA	NA	C	coding	426	1281	69	1349	80.0	0	True	NA	NA
PB.5670.3	chr19	+	2766	11	novel_in_catalog	MAP2K7	novel	3430	11	NA	NA	-3	-717	intron_retention	FALSE	canonical	1	58504	junction_2	124522.1595351205	NA	3	NA	TRUE	NA	NA	NA	C	coding	210	633	823	1455	80.0	0	True	NA	NA
PB.5670.2	chr19	+	2775	10	novel_in_catalog	MAP2K7	novel	3430	11	NA	NA	9	-717	intron_retention	FALSE	canonical	1	16706	junction_7	134909.19268772725	NA	12	1	TRUE	NA	NA	NA	C	coding	456	1371	94	1464	80.0	-637	False	NA	NA
PB.5670.1	chr19	+	2287	13	novel_not_in_catalog	MAP2K7	novel	3430	11	NA	NA	1	-717	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	141271.85661508178	NA	2	NA	TRUE	NA	NA	NA	C	coding	435	1308	102	1409	80.0	-645	False	NA	NA
PB.11767.1	chr9	-	2567	4	incomplete-splice_match	LHX6	ENST00000559895.5	3587	7	7673	4	-145	-4	5prime_fragment	FALSE	canonical	1	14139	junction_1	910.9571279093703	NA	3	NA	TRUE	NA	NA	NA	A	coding	130	393	2	394	35.0	-12	True	AATAAA	-31
PB.2422.5	chr12	-	2710	10	novel_in_catalog	ZNF384	novel	3266	10	NA	NA	-25	-4	combination_of_known_junctions	FALSE	canonical	1	75546	junction_9	148610.51077602524	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	180	1730	20.0	8	True	TATAAA	-22
PB.2422.4	chr12	-	2874	10	full-splice_match	ZNF384	ENST00000319770.7	3266	10	135	257	-76	-4	multi-exon	FALSE	canonical	1	67224	junction_9	150420.33074687744	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	344	1894	20.0	-1	True	TATAAA	-22
PB.2422.1	chr12	-	2890	10	novel_in_catalog	ZNF384	novel	3266	10	NA	NA	19	84	combination_of_known_junctions	FALSE	canonical	1	75546	junction_9	148610.51077602524	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	190	1740	80.0	-2	True	ATTAAA	-37
PB.2422.3	chr12	-	2814	9	novel_in_catalog	ZNF384	novel	3266	10	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	1	67224	junction_8	176026.9904821062	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	328	1830	10.0	15	True	TATAAA	-26
PB.5670.8	chr19	+	2660	12	novel_not_in_catalog	MAP2K7	novel	3430	11	NA	NA	2	-717	intron_retention	FALSE	canonical	1	1276	junction_8	146161.7745621509	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	64	1320	80.0	5	True	NA	NA
PB.2713.2	chr12	+	1163	6	full-splice_match	TSFM	ENST00000454289.7	2192	6	181	848	-6	2	multi-exon	FALSE	canonical	1	408633	junction_1	53891.3829497815	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	33	1010	25.0	-17	True	AATAAA	-24
PB.2713.3	chr12	+	2545	7	full-splice_match	TSFM	ENST00000550559.5	897	7	0	-1648	0	1648	multi-exon	FALSE	canonical	1	3464	junction_5	227412.37587676855	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	16	708	25.0	0	True	NA	NA
PB.2713.1	chr12	+	2482	6	full-splice_match	TSFM	ENST00000543727.5	651	6	-45	-1786	-7	1643	multi-exon	FALSE	canonical	1	12749	junction_5	191742.21247560487	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	49	696	10.0	-33	True	NA	NA
PB.12049.8	chrX	+	3451	19	novel_in_catalog	USP11	novel	3515	21	NA	NA	-2	1	intron_retention	FALSE	canonical	1	466695	junction_1	140215.44918881878	NA	2	NA	TRUE	NA	NA	NA	C	coding	827	2484	17	2500	10.0	4	True	TATAAA	-20
PB.12049.9	chrX	+	2729	21	novel_in_catalog	USP11	novel	3515	21	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	1	25537	junction_1	227253.22806386597	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	636	2708	80.0	-6	True	NA	NA
PB.12049.6	chrX	+	2919	20	novel_in_catalog	USP11	novel	3515	21	NA	NA	-6	32	intron_retention	FALSE	canonical	1	466695	junction_1	152964.1608683391	NA	1	NA	TRUE	NA	NA	NA	C	coding	827	2484	21	2504	0.0	0	True	AAAAAG	-17
PB.12049.7	chrX	+	3113	2	novel_not_in_catalog	USP11	novel	3515	21	NA	NA	-6	-4182	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.12049.4	chrX	+	3010	20	novel_in_catalog	USP11	novel	3515	21	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	466695	junction_1	148036.63053144142	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	36	2648	80.0	-15	True	NA	NA
PB.12049.5	chrX	+	2943	20	novel_in_catalog	USP11	novel	3515	21	NA	NA	-21	33	intron_retention	FALSE	canonical	1	466695	junction_1	159096.73075937582	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	1503	2888	0.0	-15	True	AAAAAG	-18
PB.12049.2	chrX	+	3198	21	full-splice_match	USP11	ENST00000218348.7	3338	21	142	-2	-22	1	multi-exon	FALSE	canonical	1	466695	junction_1	158040.72632466452	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	37	2799	10.0	-16	True	TATAAA	-20
PB.12049.3	chrX	+	2647	21	full-splice_match	USP11	ENST00000218348.7	3338	21	311	380	147	-5	multi-exon	FALSE	canonical	1	466695	junction_1	158040.72632466452	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	558	2630	90.0	-5336	False	NA	NA
PB.12049.1	chrX	+	3278	20	novel_in_catalog	USP11	novel	3515	21	NA	NA	-22	0	intron_retention	TRUE	canonical	1	466695	junction_1	152964.1608683391	NA	0	NA	TRUE	NA	NA	NA	C	coding	827	2484	37	2520	15.0	-16	True	TATAAA	-18
PB.8747.4	chr4	+	2205	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	93	2947	-2	-138	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	192	794	25.0	-8	True	ATTAAA	-29
PB.6042.1	chr19	-	1417	7	full-splice_match	PLAUR	ENST00000340093.7	1548	7	131	0	-51	0	multi-exon	FALSE	canonical	1	508173	junction_6	90424.68480453776	NA	0	NA	TRUE	NA	NA	NA	A	coding	335	1008	100	1107	25.0	4149	False	NA	NA
PB.8747.3	chr4	+	2485	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	81	2679	-14	121	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	204	806	20.0	-20	True	ACTAAA	-22
PB.8747.2	chr4	+	2364	7	full-splice_match	UBE2K	ENST00000261427.9	5245	7	80	2801	-15	-1	multi-exon	FALSE	canonical	1	1012836	junction_3	132134.4777952455	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	205	807	50.0	-21	True	AATAAA	-13
PB.9009.11	chr4	-	2232	2	novel_not_in_catalog	OTUD4	novel	2498	22	NA	NA	2595	-4204	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-2616	False	NA	NA
PB.9009.10	chr4	-	3052	21	full-splice_match	OTUD4	ENST00000454497.6	7069	21	-53	4070	-53	-4029	multi-exon	FALSE	canonical	1	7787	junction_20	50922.21407821443	NA	1	NA	TRUE	NA	NA	NA	C	coding	953	2859	192	3050	55.0	892	False	NA	NA
PB.8747.1	chr4	+	4212	2	novel_not_in_catalog	UBE2K	novel	5245	7	NA	NA	-181	-74541	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	136	411	466	876	95.0	-306	False	NA	NA
PB.6341.1	chr2	-	2443	7	full-splice_match	HS1BP3	ENST00000304031.7	2370	7	-67	-6	-67	6	multi-exon	FALSE	canonical	1	192538	junction_3	24250.635671508124	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	94	1272	20.0	442	False	AATAAA	-21
PB.10182.2	chr6	+	3444	15	full-splice_match	DCBLD1	ENST00000338728.9	3626	15	179	3	179	-3	multi-exon	FALSE	canonical	1	80995	junction_1	19900.966093486055	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	98	2089	25.0	121	False	AATAAA	-13
PB.7704.1	chr22	+	1927	9	full-splice_match	TCN2	ENST00000215838.7	2535	9	390	218	24	0	multi-exon	FALSE	canonical	1	147846	junction_1	28481.981500371425	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	105	1388	15.0	-2369	False	ATTAAA	-24
PB.10182.1	chr6	+	3590	14	novel_in_catalog	DCBLD1	novel	565	5	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	1	19121	junction_11	34946.97118704179	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	35	1666	25.0	-113	False	AATAAA	-13
PB.10182.4	chr6	+	3513	16	novel_in_catalog	DCBLD1	novel	565	5	NA	NA	201	-3	combination_of_known_junctions	FALSE	canonical	1	2361	junction_1	44408.81138462901	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	167	2158	25.0	143	False	AATAAA	-13
PB.10182.5	chr6	+	2559	16	novel_not_in_catalog	DCBLD1	novel	565	5	NA	NA	347	818	any annotated donor/acceptor	FALSE	canonical	1	44	junction_1	44790.43225541217	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	210	2201	30.0	289	False	AATAAA	-23
PB.11545.3	chr9	-	5638	2	novel_not_in_catalog	ZBTB5	novel	4627	2	NA	NA	281	1	any annotated donor/acceptor	FALSE	canonical	1	13159	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	1200	3233	25.0	3719	False	AATAAA	-16
PB.6509.8	chr2	+	2177	8	full-splice_match	SLC1A4	ENST00000234256.3	4561	8	-36	2420	-36	51	multi-exon	FALSE	canonical	1	291415	junction_1	45436.90377987964	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	280	1878	15.0	-34	True	AAGAAA	-7
PB.648.2	chr1	-	3164	14	full-splice_match	GDAP2	ENST00000369443.9	8828	14	16	5648	16	1051	multi-exon	FALSE	canonical	1	55174	junction_13	29683.95485999427	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	235	1728	65.0	6	True	NA	NA
PB.5606.1	chr19	+	1563	1	full-splice_match	S1PR4	ENST00000246115.4	1565	1	4	-2	4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	384	1155	22	1176	10.0	0	True	NA	NA
PB.7187.12	chr20	-	1646	2	novel_not_in_catalog	SNX5	novel	2270	13	NA	NA	-1	761	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	126	381	148	528	10.0	-2	True	AATAAA	-29
PB.7187.10	chr20	-	5730	12	novel_in_catalog	SNX5	novel	3087	14	NA	NA	-6	-86	intron_retention	FALSE	canonical	1	46259	junction_1	236060.7752971697	NA	7	NA	TRUE	NA	NA	NA	C	coding	360	1083	93	1175	45.0	-7	True	AATAAA	-14
PB.7187.11	chr20	-	1364	14	novel_not_in_catalog	SNX5	novel	3087	14	NA	NA	0	-204	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	254242.58898554154	NA	3	1	TRUE	NA	NA	NA	C	coding	404	1215	135	1349	60.0	-1	True	NA	NA
PB.10723.4	chr7	+	2759	7	novel_in_catalog	STAG3	novel	4450	34	NA	NA	45	2	intron_retention	FALSE	canonical	1	1409	junction_2	149659.8926540515	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	1540	2520	0.0	45	True	NA	NA
PB.3559.1	chr14	+	2137	4	full-splice_match	ISCA2	ENST00000556816.5	2626	4	22	467	-14	-467	multi-exon	FALSE	canonical	1	350336	junction_1	12840.426014047285	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	34	498	20.0	-23	False	AATATA	-11
PB.10723.2	chr7	+	2798	16	novel_not_in_catalog	STAG3	novel	4450	34	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1652	junction_8	152466.10958146295	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	1502	2431	15.0	-9100	False	AATAAA	-16
PB.10723.1	chr7	+	4187	34	full-splice_match	STAG3	ENST00000615138.4	4380	34	186	7	0	0	multi-exon	TRUE	canonical	1	7153	junction_1	110023.55809956741	NA	0	NA	TRUE	NA	NA	NA	C	coding	1226	3681	142	3822	20.0	-2	True	AATAAA	-14
PB.7712.12	chr22	+	3164	6	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	99246.73112883868	NA	2	1	TRUE	NA	NA	NA	B	coding	151	456	159	614	10.0	-33	True	ATTAAA	-22
PB.7712.10	chr22	+	3053	5	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	3	2	intron_retention	FALSE	non_canonical	0	0	junction_2	89777.76746221751	NA	3	1	TRUE	NA	NA	NA	B	coding	112	339	167	505	15.0	-41	True	ATTAAA	-20
PB.7712.11	chr22	+	3323	7	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	77353.81226330521	NA	2	1	TRUE	NA	NA	NA	B	coding	151	456	317	772	10.0	-35	True	ATTAAA	-23
PB.10549.1	chr7	-	3487	1	novel_in_catalog	VOPP1	novel	536	5	NA	NA	59024	17046	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	6593	False	NA	NA
PB.11850.2	chr9	-	5432	16	full-splice_match	FNBP1	ENST00000420781.5	5410	16	-13	-9	-13	9	multi-exon	FALSE	canonical	1	159769	junction_7	321026.09572574554	NA	3	NA	TRUE	NA	NA	NA	C	coding	612	1839	233	2071	15.0	12	True	AATAAA	-22
PB.14.2	chr1	-	3315	23	novel_not_in_catalog	ACAP3	novel	3896	24	NA	NA	88	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	130930.85016406924	NA	3	1	TRUE	NA	NA	NA	B	coding	564	1695	928	2622	15.0	-1	True	CATAAA	-19
PB.11100.8	chr8	-	3723	2	full-splice_match	TM2D2	ENST00000524331.1	544	2	-2490	-689	7	0	multi-exon	FALSE	canonical	1	420317	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	197	541	25.0	-31	True	AATAAA	-15
PB.14.1	chr1	-	3767	23	novel_not_in_catalog	ACAP3	novel	3896	24	NA	NA	-73	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	130930.85016406924	NA	3	1	TRUE	NA	NA	NA	B	coding	564	1695	901	2595	5.0	26	True	AATAAA	-13
PB.354.5	chr1	+	4569	23	novel_in_catalog	AL451062.3	novel	4037	26	NA	NA	2	-225548	no_combination_of_known_junctions	FALSE	canonical	1	11302	junction_3	114987.21508477574	NA	1	1	TRUE	NA	NA	NA	B	coding	973	2922	552	3473	30.0	-7	True	TATAAA	-13
PB.6074.1	chr19	-	1851	2	full-splice_match	GEMIN7-AS1	ENST00000586556.1	618	2	-1233	0	-1216	0	multi-exon	FALSE	canonical	1	5865	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	AATACA	-19
PB.6074.2	chr19	-	2941	1	genic	GEMIN7-AS1	novel	NA	NA	NA	NA	-2442	-4564	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	5538	False	NA	NA
PB.1155.34	chr1	-	1841	8	incomplete-splice_match	LBR	ENST00000272163.8	3745	14	-35	10326	-35	-5266	3prime_fragment	FALSE	canonical	1	411936	junction_7	135103.73760173767	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	132	1226	85.0	-33	True	NA	NA
PB.5583.27	chr19	-	3007	14	novel_in_catalog	MKNK2	novel	803	5	NA	NA	-31	90	combination_of_known_junctions	FALSE	canonical	1	362	junction_13	807581.1499063625	NA	1	NA	TRUE	NA	NA	NA	B	coding	465	1398	155	1552	5.0	-33	False	NA	NA
PB.5583.21	chr19	-	2006	1	novel_in_catalog	MKNK2	novel	803	5	NA	NA	2182	-173	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	6788	False	NA	NA
PB.6476.29	chr2	-	4158	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-35	0	any annotated donor/acceptor	FALSE	canonical	1	14733	junction_13	137869.86563942677	NA	2	NA	TRUE	NA	NA	NA	C	coding	753	2262	365	2626	20.0	-3	True	ATTAAA	-19
PB.6355.1	chr2	-	3456	18	full-splice_match	DNMT3A	ENST00000402667.1	2300	18	41	-1197	41	-23	multi-exon	FALSE	canonical	1	39538	junction_17	54149.4838349517	NA	2	NA	TRUE	NA	NA	NA	C	coding	689	2070	108	2177	80.0	-8	True	NA	NA
PB.6355.2	chr2	-	4547	23	novel_not_in_catalog	DNMT3A	novel	9501	23	NA	NA	27295	-23	any annotated donor/acceptor	FALSE	canonical	1	1863	junction_22	74952.34657748265	NA	6	NA	TRUE	NA	NA	NA	C	coding	912	2739	530	3268	80.0	NA	False	NA	NA
PB.6355.3	chr2	-	4354	23	full-splice_match	DNMT3A	ENST00000264709.7	9501	23	2	5145	2	-23	multi-exon	FALSE	canonical	1	12489	junction_22	73918.43136813457	NA	0	NA	TRUE	NA	NA	NA	C	coding	912	2739	337	3075	80.0	-75	False	NA	NA
PB.6355.4	chr2	-	4295	23	full-splice_match	DNMT3A	ENST00000321117.9	4279	23	-40	24	-40	-23	multi-exon	FALSE	canonical	1	38531	junction_22	71611.05231782392	NA	2	NA	TRUE	NA	NA	NA	C	coding	912	2739	278	3016	80.0	-1	True	NA	NA
PB.679.2	chr1	-	5176	30	full-splice_match	ITGA10	ENST00000369304.7	5269	30	92	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1167	3504	84	3587	20.0	8619	False	AATAAA	-16
PB.6355.7	chr2	-	3653	19	full-splice_match	DNMT3A	ENST00000380746.8	3589	19	-88	24	-88	-23	multi-exon	FALSE	canonical	1	18498	junction_18	68388.96027121918	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	203	2374	80.0	798	False	NA	NA
PB.6355.8	chr2	-	3630	18	novel_in_catalog	DNMT3A	novel	9501	23	NA	NA	-79	-23	combination_of_known_junctions	TRUE	canonical	1	8846	junction_17	59587.98417094753	NA	2	NA	TRUE	NA	NA	NA	C	coding	760	2283	69	2351	80.0	1035	False	NA	NA
PB.8191.15	chr3	+	2164	22	novel_in_catalog	APPL1	novel	2821	24	NA	NA	15	461	combination_of_known_junctions	FALSE	canonical	1	9373	junction_1	117676.50748494737	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1926	238	2163	45.0	-14	True	AATAAA	-14
PB.3453.2	chr14	+	1287	7	novel_not_in_catalog	LGALS3	novel	319	3	NA	NA	-7	-5	any annotated donor/acceptor	FALSE	canonical	1	5097	junction_2	1435660.2371675163	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	423	740	30.0	-3	True	AATAAA	-11
PB.3453.3	chr14	+	826	6	full-splice_match	LGALS3	ENST00000254301.13	1146	6	205	115	-7	-115	multi-exon	FALSE	canonical	1	1536505	junction_1	802217.3946933338	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	79	399	80.0	-3	True	NA	NA
PB.3453.1	chr14	+	1599	5	novel_in_catalog	LGALS3	novel	319	3	NA	NA	-7	-5	intron_retention	FALSE	canonical	1	1536505	junction_1	811079.8911700993	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	1097	1462	30.0	-3	True	AATAAA	-11
PB.3453.6	chr14	+	3562	6	full-splice_match	LGALS3	ENST00000254301.13	1146	6	208	-2624	-4	2614	multi-exon	FALSE	canonical	1	1536505	junction_1	802217.3946933338	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	54	806	30.0	0	True	AATAAA	-15
PB.3453.7	chr14	+	2611	6	full-splice_match	LGALS3	ENST00000554715.1	916	6	-8	-1687	-4	-5	multi-exon	FALSE	canonical	1	452	junction_5	1228541.4903175228	NA	7	NA	TRUE	NA	NA	NA	C	coding	233	702	54	755	30.0	0	True	AATAAA	-11
PB.3453.4	chr14	+	1166	7	novel_not_in_catalog	LGALS3	novel	319	3	NA	NA	-6	-115	any annotated donor/acceptor	FALSE	canonical	1	5097	junction_2	1435660.2371675163	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	422	739	80.0	-2	True	NA	NA
PB.3453.5	chr14	+	956	6	full-splice_match	LGALS3	ENST00000254301.13	1146	6	206	-16	-6	6	multi-exon	FALSE	canonical	1	1536505	junction_1	802217.3946933338	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	78	398	30.0	-2	True	AATAAA	-22
PB.22.1	chr1	+	2409	17	novel_not_in_catalog	ATAD3A	novel	2492	16	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	194491.42112514202	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	271	1794	0.0	-12	True	AATAAA	-20
PB.3453.8	chr14	+	3025	4	full-splice_match	LGALS3	ENST00000556438.6	1734	4	-1296	5	-1296	-5	multi-exon	FALSE	canonical	1	2521720	junction_1	502381.53388988686	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	2523	2888	30.0	-9440	False	AATAAA	-11
PB.9129.1	chr5	+	1839	3	full-splice_match	C5orf38	ENST00000515640.5	1441	3	-390	-8	-275	8	multi-exon	FALSE	canonical	1	26020	junction_2	3122.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	135	408	410	817	20.0	-4646	False	AATAAA	-30
PB.22.4	chr1	+	3776	4	novel_in_catalog	ATAD3A	novel	2492	16	NA	NA	31	-1	intron_retention	FALSE	canonical	1	44590	junction_3	145766.8901416078	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	2763	3164	5.0	NA	False	AATAAA	-17
PB.6925.1	chr2	+	2529	1	antisense	novelGene_RFTN2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.4584.2	chr16	-	2088	3	incomplete-splice_match	COTL1	ENST00000262428.4	1843	4	-1	10	-1	-2	intron_retention	FALSE	canonical	1	2182077	junction_2	390365.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	73	222	626	847	30.0	-4	True	AATAAA	-16
PB.4280.1	chr16	-	4621	5	novel_in_catalog	AC138811.2	novel	764	7	NA	NA	-29	-3605	intron_retention	FALSE	canonical	1	996347	junction_2	975927.3141667622	NA	3	NA	TRUE	NA	NA	NA	A	coding	97	294	83	376	25.0	-5	True	AATAAA	-17
PB.4280.3	chr16	-	2038	6	full-splice_match	ARL6IP1	ENST00000304414.11	2409	6	131	240	0	-240	multi-exon	FALSE	canonical	1	996347	junction_2	880657.7732505176	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	82	693	30.0	-4	True	ATTAAA	-23
PB.4280.2	chr16	-	2247	6	full-splice_match	ARL6IP1	ENST00000304414.11	2409	6	134	28	0	-28	multi-exon	FALSE	canonical	1	996347	junction_2	880657.7732505176	NA	3	NA	TRUE	NA	NA	NA	C	coding	203	612	79	690	65.0	-1	True	NA	NA
PB.8369.3	chr3	+	3739	14	incomplete-splice_match	PLXNA1	ENST00000393409.2	9066	31	29153	1813	-8638	0	5prime_fragment	FALSE	canonical	1	268577	junction_1	55809.44107253183	NA	1	NA	TRUE	NA	NA	NA	B	coding	612	1839	339	2177	20.0	1062	False	TTTAAA	-20
PB.8369.1	chr3	+	6183	18	incomplete-splice_match	PLXNA1	ENST00000393409.2	9066	31	26590	6	-11201	-6	5prime_fragment	FALSE	canonical	1	232325	junction_3	61357.66136069708	NA	2	NA	TRUE	NA	NA	NA	B	coding	795	2388	427	2814	20.0	-1501	False	AATAAA	-36
PB.4584.1	chr16	-	1834	4	full-splice_match	COTL1	ENST00000262428.4	1843	4	0	9	0	-1	multi-exon	FALSE	canonical	1	1375616	junction_3	647996.3947003615	NA	11	NA	TRUE	NA	NA	NA	C	coding	142	429	164	592	30.0	-3	True	AATAAA	-17
PB.11732.1	chr9	+	1756	4	full-splice_match	SLC31A2	ENST00000259392.7	1785	4	32	-3	-2	3	multi-exon	FALSE	canonical	1	181694	junction_2	21402.102799076125	NA	3	NA	TRUE	NA	NA	NA	A	coding	143	432	102	533	10.0	-2	True	ATTAAA	-44
PB.11516.13	chr9	-	3244	17	full-splice_match	VCP	ENST00000358901.10	4370	17	579	547	-43	259	multi-exon	FALSE	canonical	1	1397368	junction_16	597930.3595088926	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	318	2738	55.0	7373	False	NA	NA
PB.1155.31	chr1	-	5840	8	novel_in_catalog	LBR	novel	3745	14	NA	NA	-79	-1311	intron_retention	FALSE	canonical	1	411936	junction_7	135103.73760173767	NA	7	NA	TRUE	NA	NA	NA	C	coding	364	1095	176	1270	50.0	0	True	AATAAA	-16
PB.5454.22	chr18	+	4284	19	incomplete-splice_match	FHOD3	ENST00000359247.8	4518	24	278614	-276	-18336	0	5prime_fragment	FALSE	canonical	1	23604	junction_7	29044.68424925444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1247	3744	16	3759	40.0	NA	False	AATAAA	-15
PB.4455.1	chr16	+	3345	12	full-splice_match	ADGRG5	ENST00000349457.7	3557	12	216	-4	-17	-2	multi-exon	TRUE	canonical	1	28449	junction_1	14208.132194144344	NA	3	NA	TRUE	NA	NA	NA	C	coding	528	1587	104	1690	30.0	-8	True	NA	NA
PB.5454.20	chr18	+	4667	24	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	2	2	no_combination_of_known_junctions	FALSE	canonical	1	6366	junction_14	31640.124983203543	NA	0	NA	TRUE	NA	NA	NA	C	coding	1340	4023	118	4140	35.0	6	True	AATAAA	-17
PB.5454.21	chr18	+	2630	5	novel_not_in_catalog	FHOD3	novel	4967	25	NA	NA	2	-202823	any annotated donor/acceptor	FALSE	canonical	1	280	junction_4	30325.148263240197	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	118	615	85.0	6	True	NA	NA
PB.5454.24	chr18	+	3441	13	novel_not_in_catalog	FHOD3	novel	4967	25	NA	NA	-291	0	any annotated donor/acceptor	FALSE	canonical	1	613	junction_1	36740.77174034847	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	679	2916	40.0	1	True	AATAAA	-15
PB.6104.1	chr19	-	1575	3	novel_in_catalog	BBC3	novel	1827	4	NA	NA	-23	0	no_combination_of_known_junctions	FALSE	canonical	1	24470	junction_2	80075.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	50	153	445	597	10.0	1642	False	AATAAA	-18
PB.11973.1	chrX	-	4755	4	novel_in_catalog	TRAPPC2	novel	2716	5	NA	NA	-17	1	intron_retention	FALSE	canonical	1	9869	junction_1	27435.667089878945	NA	1	NA	TRUE	NA	NA	NA	B	coding	101	306	1518	1823	30.0	25	True	AATAAA	-13
PB.11973.3	chrX	-	2702	5	novel_not_in_catalog	TRAPPC2	novel	2716	5	NA	NA	10	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	10102.622045167283	NA	1	NA	TRUE	NA	NA	NA	B	coding	140	423	119	541	30.0	-6	True	AATAAA	-13
PB.11973.2	chrX	-	2846	6	novel_not_in_catalog	TRAPPC2	novel	2716	5	NA	NA	8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	30923.317890549843	NA	3	NA	TRUE	NA	NA	NA	B	coding	121	366	320	685	30.0	-8	True	AATAAA	-13
PB.11973.5	chrX	-	2908	7	novel_not_in_catalog	TRAPPC2	novel	2716	5	NA	NA	15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	24059.940701413947	NA	2	1	TRUE	NA	NA	NA	B	coding	140	423	326	748	35.0	-1	True	AATAAA	-12
PB.11973.4	chrX	-	2714	5	novel_not_in_catalog	TRAPPC2	novel	2716	5	NA	NA	19	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	10102.622045167283	NA	4	1	TRUE	NA	NA	NA	B	coding	147	444	110	553	30.0	3	True	AATAAA	-13
PB.11973.7	chrX	-	2783	6	novel_not_in_catalog	TRAPPC2	novel	2716	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	3989.4811492222893	NA	3	NA	TRUE	NA	NA	NA	B	coding	140	423	201	623	35.0	-18	True	AATAAA	-12
PB.11973.6	chrX	-	2812	5	novel_not_in_catalog	TRAPPC2	novel	2716	5	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	4176	junction_1	30560.330630574008	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	54	False	AATAAA	-12
PB.1237.1	chr1	-	3779	13	full-splice_match	ADSS	ENST00000366535.3	2780	13	204	-1203	204	1203	multi-exon	FALSE	canonical	1	134946	junction_8	210463.7215666079	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	114	1484	25.0	-22	True	NA	NA
PB.1237.2	chr1	-	2675	14	novel_not_in_catalog	AL645465.1	novel	642	4	NA	NA	-42364	-33395	intron_retention	FALSE	canonical	1	1467	junction_9	249689.24598284022	NA	2	1	TRUE	NA	NA	NA	A	coding	276	831	754	1584	10.0	172	False	ATTAAA	-20
PB.4455.2	chr16	+	3440	12	novel_not_in_catalog	ADGRG5	novel	3557	12	NA	NA	9	-2	any annotated donor/acceptor	FALSE	canonical	1	900	junction_1	20126.434238508937	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	199	1785	30.0	-14	False	NA	NA
PB.1237.4	chr1	-	2201	13	full-splice_match	ADSS	ENST00000366535.3	2780	13	225	354	225	-354	multi-exon	FALSE	canonical	1	134946	junction_8	210463.7215666079	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	93	1463	15.0	-1	True	ATTAAA	-16
PB.1237.5	chr1	-	1627	13	full-splice_match	ADSS	ENST00000366535.3	2780	13	178	975	178	-975	multi-exon	FALSE	canonical	1	134946	junction_8	210463.7215666079	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	140	1510	15.0	172	False	AATAAA	-26
PB.10310.1	chr6	+	3295	1	novel_in_catalog	AL035530.2	novel	1675	5	NA	NA	8	-39035	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	8	True	NA	NA
PB.2971.1	chr12	+	2082	3	novel_not_in_catalog	ORAI1	novel	1496	3	NA	NA	-10	430	intron_retention	FALSE	non_canonical	0	0	junction_2	190956.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	238	717	132	848	15.0	0	True	NA	NA
PB.9282.1	chr5	-	2342	15	antisense	novelGene_BDP1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	67.47531672654037	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.6151.1	chr19	+	2100	17	full-splice_match	TBC1D17	ENST00000221543.9	2366	17	271	-5	-6	0	multi-exon	FALSE	canonical	1	261797	junction_1	131431.65201860564	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	29	1975	5.0	-9	True	ATTAAA	-19
PB.2640.10	chr12	-	2953	15	novel_in_catalog	CALCOCO1	novel	5866	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9782	junction_12	183187.66878960884	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	74	2128	35.0	-7	True	AATATA	-15
PB.8814.5	chr4	+	2423	8	novel_not_in_catalog	MOB1B	novel	627	5	NA	NA	91203	8456	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	167140.97276312616	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	250	1032	30.0	-62	True	AATAAA	-22
PB.11294.6	chr8	-	1298	4	novel_in_catalog	ZFPM2-AS1	novel	539	6	NA	NA	-1	716	combination_of_known_junctions	FALSE	canonical	1	547	junction_1	10743.328172508844	NA	3	NA	TRUE	NA	NA	NA	C	coding	89	270	51	320	15.0	-31	True	AATAAA	-20
PB.6338.35	chr2	-	5001	21	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	39	9	any annotated donor/acceptor	FALSE	canonical	1	9628	junction_14	240301.57730610092	NA	3	2	TRUE	NA	NA	NA	C	coding	1061	3186	86	3271	55.0	0	True	ATTAAA	-26
PB.12353.1	chrX	+	3083	14	incomplete-splice_match	PLXNA3	ENST00000369682.4	10885	33	9312	4138	-1068	945	5prime_fragment	FALSE	canonical	1	189910	junction_1	52411.63567501188	NA	1	NA	TRUE	NA	NA	NA	A	coding	677	2034	94	2127	10.0	-6740	False	ATTAAA	-16
PB.11519.2	chr9	-	1961	8	incomplete-splice_match	STOML2	ENST00000356493.9	1278	10	29	5	29	0	intron_retention	FALSE	canonical	1	1775481	junction_3	268261.0417313247	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	1079	1822	25.0	-3	True	AATAAA	-18
PB.11294.4	chr8	-	1998	4	novel_not_in_catalog	ZFPM2-AS1	novel	539	6	NA	NA	-3	3139	any annotated donor/acceptor	FALSE	canonical	1	101	junction_1	10949.678239818537	NA	5	NA	TRUE	NA	NA	NA	C	coding	131	393	1605	1997	80.0	73	False	NA	NA
PB.11100.3	chr8	-	3060	4	full-splice_match	TM2D2	ENST00000522434.5	469	4	-28	-2563	-4	-1	multi-exon	FALSE	canonical	1	43477	junction_3	184264.17490838165	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-42	True	AATAAA	-20
PB.499.1	chr1	+	1949	9	full-splice_match	RPF1	ENST00000370654.5	1385	9	-18	-546	-10	546	multi-exon	FALSE	canonical	1	525002	junction_1	121008.72290846433	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	34	1083	20.0	-18	True	AATAAA	-11
PB.1227.7	chr1	+	6826	33	novel_not_in_catalog	MTR	novel	10405	32	NA	NA	76	244	any annotated donor/acceptor	FALSE	canonical	1	15873	junction_1	37282.963447514616	NA	1	NA	TRUE	NA	NA	NA	C	coding	1264	3795	14	3808	35.0	-387	False	NA	NA
PB.1227.6	chr1	+	2587	21	novel_not_in_catalog	MTR	novel	10405	32	NA	NA	58	9205	any annotated donor/acceptor	FALSE	canonical	1	15873	junction_1	43216.565463806815	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2250	337	2586	70.0	-34	True	NA	NA
PB.1227.5	chr1	+	6035	33	full-splice_match	MTR	ENST00000366577.9	10529	33	-16	4510	13	-938	multi-exon	FALSE	canonical	1	99687	junction_1	28097.510881453512	NA	2	NA	TRUE	NA	NA	NA	C	coding	1265	3798	411	4208	55.0	2	True	NA	NA
PB.1227.4	chr1	+	6344	33	full-splice_match	MTR	ENST00000366577.9	10529	33	-20	4205	9	-633	multi-exon	TRUE	canonical	1	99687	junction_1	28097.510881453512	NA	1	NA	TRUE	NA	NA	NA	C	coding	1265	3798	415	4212	70.0	-2	True	NA	NA
PB.8461.13	chr3	-	3158	3	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	13	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	150447.5	NA	1	1	TRUE	NA	NA	NA	C	coding	128	387	252	638	15.0	12	True	AATAAA	-16
PB.11294.1	chr8	-	3005	9	novel_not_in_catalog	ZFPM2-AS1	novel	539	6	NA	NA	0	4698	any annotated donor/acceptor	FALSE	canonical	1	477	junction_1	10163.189715217364	NA	2	NA	TRUE	NA	NA	NA	C	coding	98	297	50	346	30.0	-30	True	AATAAA	-15
PB.2240.2	chr11	-	2633	10	full-splice_match	CCDC82	ENST00000646050.1	2611	10	16	-38	-14	2	multi-exon	FALSE	canonical	1	10113	junction_2	94385.56472964144	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	201	1754	20.0	-6	True	AATAAA	-28
PB.2240.1	chr11	-	2681	10	full-splice_match	CCDC82	ENST00000646818.1	2754	10	82	-9	15	2	multi-exon	FALSE	canonical	1	95894	junction_9	73427.96739225474	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	168	1802	20.0	27	True	AATAAA	-28
PB.2240.7	chr11	-	2591	8	novel_in_catalog	CCDC82	novel	2941	9	NA	NA	5	1	no_combination_of_known_junctions	FALSE	canonical	1	6084	junction_7	101618.06451008358	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	86	1720	35.0	-15	True	AATAAA	-20
PB.2240.6	chr11	-	2784	11	novel_not_in_catalog	CCDC82	novel	2941	9	NA	NA	5	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	113476.8492506291	NA	8	3	TRUE	NA	NA	NA	C	coding	544	1635	279	1913	35.0	17	True	AATAAA	-20
PB.2240.5	chr11	-	3062	10	novel_in_catalog	CCDC82	novel	2941	9	NA	NA	34	1	combination_of_known_junctions	FALSE	canonical	1	10478	junction_9	89691.55799959693	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	557	2191	35.0	0	True	AATAAA	-20
PB.2240.4	chr11	-	4193	9	full-splice_match	CCDC82	ENST00000644686.1	4213	9	22	-2	-9	1	multi-exon	FALSE	canonical	1	95894	junction_8	77122.849003939	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	1688	3322	35.0	-1	True	AATAAA	-20
PB.12269.14	chrX	-	3476	4	novel_in_catalog	RAP2C	novel	3341	6	NA	NA	-4	-289	intron_retention	FALSE	canonical	1	13002	junction_3	199318.94415121595	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	617	1168	25.0	-1	True	AATAAA	-14
PB.7120.1	chr2	+	3071	6	incomplete-splice_match	LINC01881	ENST00000456398.5	1235	8	47	15790	1	2443	3prime_fragment	FALSE	canonical	1	31494	junction_1	18224.84868085329	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	130	459	45.0	-13	True	NA	NA
PB.12269.16	chrX	-	2035	5	novel_in_catalog	RAP2C	novel	3341	6	NA	NA	-10	10	combination_of_known_junctions	FALSE	canonical	1	13002	junction_4	207357.56670182064	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	700	1053	30.0	-7	True	AATAAA	-24
PB.12269.10	chrX	-	3264	6	novel_not_in_catalog	RAP2C	novel	3341	6	NA	NA	-12	-5	any annotated donor/acceptor	FALSE	canonical	1	43	junction_4	212315.6437011649	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	319	672	20.0	-9	True	AATAAA	-16
PB.12269.11	chrX	-	3357	5	novel_in_catalog	RAP2C	novel	3341	6	NA	NA	-4	-287	combination_of_known_junctions	FALSE	canonical	1	13002	junction_4	207357.56670182064	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	694	1047	20.0	-1	True	AATAAA	-16
PB.12269.12	chrX	-	3553	4	full-splice_match	RAP2C	ENST00000342983.6	3896	4	55	288	55	-288	multi-exon	FALSE	canonical	1	71043	junction_3	171958.40421321534	NA	5	NA	TRUE	NA	NA	NA	C	coding	183	552	693	1244	25.0	0	True	AATAAA	-15
PB.8461.10	chr3	-	4524	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	190364.40928336774	NA	6	1	TRUE	NA	NA	NA	C	coding	269	810	146	955	15.0	-1	True	AATAAA	-16
PB.11780.7	chr9	+	4348	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	-37	-864	-30	864	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	183	1124	55.0	-18	True	CATAAA	-7
PB.7237.2	chr20	+	1402	7	full-splice_match	MAPRE1	ENST00000375571.5	2623	7	1	1220	1	-1220	multi-exon	FALSE	canonical	1	499568	junction_3	355466.0869204762	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	139	945	15.0	1	True	TATAAA	-18
PB.7237.3	chr20	+	2552	7	full-splice_match	MAPRE1	ENST00000375571.5	2623	7	69	2	69	-2	multi-exon	FALSE	canonical	1	499568	junction_3	355466.0869204762	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	71	877	25.0	8	True	AATAAA	-18
PB.7237.1	chr20	+	2625	7	novel_not_in_catalog	MAPRE1	novel	2623	7	NA	NA	-115	-2	any annotated donor/acceptor	FALSE	canonical	1	10922	junction_1	514689.8678190154	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	144	950	25.0	-176	False	AATAAA	-18
PB.7237.6	chr20	+	2410	7	full-splice_match	MAPRE1	ENST00000375571.5	2623	7	62	151	62	-151	multi-exon	FALSE	canonical	1	499568	junction_3	355466.0869204762	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	78	884	15.0	1	True	NA	NA
PB.7237.7	chr20	+	2087	7	full-splice_match	MAPRE1	ENST00000375571.5	2623	7	54	482	54	-482	multi-exon	FALSE	canonical	1	499568	junction_3	355466.0869204762	NA	2	NA	TRUE	NA	NA	NA	C	coding	268	807	86	892	35.0	-7	True	GATAAA	-41
PB.7237.4	chr20	+	2612	7	novel_not_in_catalog	MAPRE1	novel	2623	7	NA	NA	37	-2	any annotated donor/acceptor	FALSE	canonical	1	1564	junction_1	517220.00966352155	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	131	937	25.0	-2	True	AATAAA	-18
PB.7237.5	chr20	+	4484	6	incomplete-splice_match	MAPRE1	ENST00000375571.5	2623	7	39	1	39	-1	intron_retention	FALSE	canonical	1	499568	junction_3	359445.09245201835	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	101	862	25.0	0	True	AATAAA	-19
PB.7237.8	chr20	+	2156	5	novel_not_in_catalog	MAPRE1	novel	2623	7	NA	NA	62	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	601900.9352713285	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1	True	AATAAA	-18
PB.7237.9	chr20	+	2425	6	novel_in_catalog	MAPRE1	novel	2623	7	NA	NA	73	-1	no_combination_of_known_junctions	FALSE	canonical	1	4265	junction_1	558329.8430557335	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	84	749	25.0	12	True	AATAAA	-19
PB.4518.5	chr16	+	1796	5	full-splice_match	NIP7	ENST00000254940.9	2402	5	334	272	-33	-252	multi-exon	FALSE	canonical	1	187256	junction_4	172378.01007143428	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	67	609	25.0	-13	True	TATAAA	-16
PB.4518.4	chr16	+	2242	5	full-splice_match	NIP7	ENST00000254940.9	2402	5	302	-142	-65	142	multi-exon	FALSE	canonical	1	187256	junction_4	172378.01007143428	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	99	641	20.0	-88	False	AATACA	-19
PB.4518.6	chr16	+	2732	5	full-splice_match	NIP7	ENST00000254940.9	2402	5	337	-667	-30	667	multi-exon	FALSE	canonical	1	187256	junction_4	172378.01007143428	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	64	606	20.0	-10	True	AATACA	-13
PB.4518.1	chr16	+	1408	5	full-splice_match	NIP7	ENST00000254940.9	2402	5	315	679	-52	360	multi-exon	FALSE	canonical	1	187256	junction_4	172378.01007143428	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	86	628	85.0	-75	False	NA	NA
PB.4518.3	chr16	+	1613	5	full-splice_match	NIP7	ENST00000254940.9	2402	5	350	439	-17	-419	multi-exon	FALSE	canonical	1	187256	junction_4	172378.01007143428	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	51	593	25.0	3	True	AATAAA	-21
PB.4518.2	chr16	+	2056	5	full-splice_match	NIP7	ENST00000254940.9	2402	5	343	3	-24	-3	multi-exon	FALSE	canonical	1	187256	junction_4	172378.01007143428	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	58	600	20.0	-4	True	AATAAA	-32
PB.3750.1	chr15	-	2635	1	novel_in_catalog	AC010809.1	novel	562	2	NA	NA	3437	-152	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-21
PB.9512.4	chr5	+	4015	1	full-splice_match	PCDHB16	ENST00000609684.2	5001	1	983	3	-21	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	776	2331	179	2509	85.0	-5	True	TTTAAA	-9
PB.9512.1	chr5	+	3907	1	full-splice_match	PCDHB16	ENST00000609684.2	5001	1	920	174	-84	-174	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	776	2331	242	2572	25.0	-4842	False	AATAAA	-22
PB.9512.2	chr5	+	2543	2	full-splice_match	PCDHB16	ENST00000625044.1	894	2	-38	-1611	-38	-519	multi-exon	FALSE	canonical	1	1620	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	207	1553	30.0	-10004	False	AATAAA	-21
PB.9512.3	chr5	+	3513	1	full-splice_match	PCDHB16	ENST00000609684.2	5001	1	973	515	-31	-515	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	776	2331	189	2519	25.0	-15	True	AATAAA	-25
PB.2055.3	chr11	+	1957	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	15706	5080	12953	-5080	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-5731	False	NA	NA
PB.2055.2	chr11	+	1772	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	16111	4860	13358	-4860	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-5326	False	NA	NA
PB.2055.1	chr11	+	2274	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	15389	5080	12636	-5080	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-6048	False	NA	NA
PB.7452.9	chr21	-	3030	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-11	-16643	any annotated donor/acceptor	FALSE	canonical	1	357	junction_1	32736.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	500	799	90.0	-22	False	NA	NA
PB.8461.16	chr3	-	4753	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	74	-2724	-2	-286	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	3	NA	TRUE	NA	NA	NA	C	coding	400	1203	267	1469	65.0	-3	True	NA	NA
PB.6288.1	chr2	-	1509	8	novel_in_catalog	EIPR1	novel	2932	11	NA	NA	2	-46	combination_of_known_junctions	FALSE	canonical	1	15525	junction_5	146328.9755679835	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	415	1146	15.0	-11	True	AATAAA	-16
PB.9300.3	chr5	-	1985	11	novel_in_catalog	POC5	novel	2229	12	NA	NA	-12	-6	combination_of_known_junctions	FALSE	canonical	1	11762	junction_9	41944.37589820595	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	382	1758	55.0	-24	False	AGTAAA	-14
PB.9300.2	chr5	-	5045	11	novel_in_catalog	POC5	novel	2229	12	NA	NA	-7	-6	intron_retention	FALSE	canonical	1	88705	junction_10	131035.84276025397	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	3442	4818	55.0	-52	False	AGTAAA	-14
PB.9300.1	chr5	-	2094	12	full-splice_match	POC5	ENST00000428202.6	2229	12	52	83	1	-5	multi-exon	FALSE	canonical	1	88705	junction_11	125482.23073282508	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	139	1866	50.0	7	True	AGTAAA	-15
PB.10921.10	chr7	+	3719	3	incomplete-splice_match	REPIN1	ENST00000397281.6	3292	4	301	1	194	-1	5prime_fragment	FALSE	canonical	1	61827	junction_1	7451.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	951	2621	10.0	-1	True	AATAAA	-20
PB.9300.5	chr5	-	1994	11	novel_in_catalog	POC5	novel	2229	12	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	3086	junction_10	43325.19229224494	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	392	1768	50.0	7	True	AGTAAA	-13
PB.9300.4	chr5	-	1922	11	novel_in_catalog	POC5	novel	2229	12	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	8131	junction_1	140072.04707149818	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	145	1695	55.0	1	True	AGTAAA	-14
PB.8930.3	chr4	+	1859	7	novel_in_catalog	MCUB	novel	2278	8	NA	NA	0	-9	intron_retention	FALSE	canonical	1	164954	junction_1	102263.06924626634	NA	4	NA	TRUE	NA	NA	NA	C	coding	280	843	130	972	45.0	11	True	ATTAAA	-8
PB.8930.2	chr4	+	2337	8	full-splice_match	MCUB	ENST00000394650.6	2278	8	22	-81	15	81	multi-exon	FALSE	canonical	1	164954	junction_1	113228.83246572413	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	112	1122	20.0	-19	True	ATTAAA	-36
PB.8930.1	chr4	+	1259	8	full-splice_match	MCUB	ENST00000394650.6	2278	8	0	1019	0	-9	multi-exon	FALSE	canonical	1	164954	junction_1	113228.83246572413	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	134	1144	45.0	7	True	ATTAAA	-8
PB.11415.3	chr8	-	2427	6	full-splice_match	ZNF250	ENST00000417550.6	2131	6	-35	-261	-1	261	multi-exon	FALSE	canonical	1	38919	junction_5	27092.44997116355	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	123	1790	20.0	-14	True	CATAAA	-17
PB.11415.4	chr8	-	2169	6	full-splice_match	ZNF250	ENST00000417550.6	2131	6	-44	6	4	-6	multi-exon	FALSE	canonical	1	38919	junction_5	27092.44997116355	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	132	1799	30.0	-23	True	AATAAA	-40
PB.11415.5	chr8	-	2181	6	full-splice_match	ZNF250	ENST00000292579.11	6364	6	-12	4195	6	-7	multi-exon	FALSE	canonical	1	19811	junction_4	34067.13263190784	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	130	1812	30.0	-21	True	AATAAA	-39
PB.11415.6	chr8	-	2474	6	novel_in_catalog	ZNF250	novel	677	6	NA	NA	29	-15	combination_of_known_junctions	FALSE	canonical	1	8209	junction_5	35798.43861176071	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	446	2113	35.0	-687	False	AATAAA	-31
PB.11415.7	chr8	-	2213	6	full-splice_match	ZNF250	ENST00000533622.5	672	6	-40	-1501	-1	-15	multi-exon	FALSE	canonical	1	6078	junction_5	36479.02394746877	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	185	1852	35.0	-14	True	AATAAA	-31
PB.7403.1	chr20	+	3068	32	novel_in_catalog	COL9A3	novel	635	12	NA	NA	-591	-1	combination_of_known_junctions	TRUE	canonical	1	2208	junction_1	49762.93712872482	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	1149	2642	30.0	-1790	False	AATAAA	-31
PB.954.10	chr1	-	2681	19	novel_in_catalog	COP1	novel	2131	9	NA	NA	-157	0	combination_of_known_junctions	FALSE	canonical	1	14124	junction_17	121851.65463895023	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	885	2360	25.0	3	True	AATAAA	-37
PB.8524.23	chr3	+	3497	20	incomplete-splice_match	ECT2	ENST00000441497.6	2825	23	4521	-1137	-3809	0	5prime_fragment	FALSE	canonical	1	254173	junction_1	69142.9282336651	NA	29	3	TRUE	NA	NA	NA	C	coding	739	2220	42	2261	25.0	7974	False	AATAAA	-19
PB.8524.22	chr3	+	4079	24	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	9413	junction_1	103856.92773683343	NA	1	NA	TRUE	NA	NA	NA	C	coding	883	2652	191	2842	25.0	-55	False	AATAAA	-20
PB.8524.21	chr3	+	5603	24	novel_in_catalog	ECT2	novel	4087	24	NA	NA	1	-1	intron_retention	FALSE	canonical	1	16227	junction_23	107584.81797387858	NA	2	NA	TRUE	NA	NA	NA	C	coding	927	2784	117	2900	20.0	38	True	AATAAA	-18
PB.8524.20	chr3	+	4031	25	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	15092	junction_12	119455.20441324322	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	139	2796	20.0	16	True	AATAAA	-18
PB.6492.4	chr2	-	1908	14	full-splice_match	CCT4	ENST00000394440.7	2520	14	168	444	35	-103	multi-exon	FALSE	canonical	1	1572181	junction_12	598334.2419182851	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	130	1749	45.0	19	True	NA	NA
PB.7403.2	chr20	+	3056	31	novel_in_catalog	COL9A3	novel	635	12	NA	NA	2	-52	intron_retention	FALSE	canonical	1	47673	junction_1	46873.226176820106	NA	2	NA	TRUE	NA	NA	NA	C	coding	383	1152	1545	2696	35.0	2	True	AATAAA	-19
PB.8755.18	chr4	+	1689	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	17	5776	8	-61	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	403	1092	15.0	0	True	NA	NA
PB.8755.19	chr4	+	4877	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	18	2587	9	-2056	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	402	1091	65.0	1	True	TTTAAA	-21
PB.6492.2	chr2	-	1909	14	full-splice_match	CCT4	ENST00000394440.7	2520	14	192	419	59	-78	multi-exon	FALSE	canonical	1	1572181	junction_12	598334.2419182851	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	106	1725	20.0	43	True	ATTAAA	-15
PB.6492.3	chr2	-	1896	13	full-splice_match	CCT4	ENST00000544079.2	2261	13	59	306	59	-1	multi-exon	FALSE	canonical	1	3662	junction_11	881257.581582123	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	106	1635	40.0	43	True	AATAAA	-18
PB.8755.14	chr4	+	4310	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	17	3155	8	2560	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	403	1092	40.0	0	True	NA	NA
PB.7403.5	chr20	+	2523	33	novel_not_in_catalog	COL9A3	novel	635	12	NA	NA	-2	-53	any annotated donor/acceptor	FALSE	canonical	1	660	junction_5	57119.287846794796	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	671	2164	35.0	-2	True	AATAAA	-18
PB.8755.16	chr4	+	2699	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	17	4766	8	949	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	403	1092	40.0	0	True	AATAAA	-19
PB.8755.17	chr4	+	2307	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	17	5158	8	557	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	403	1092	25.0	0	True	TATAAA	-18
PB.8755.10	chr4	+	2446	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	11	5025	2	690	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	409	1098	25.0	-6	True	AATACA	-21
PB.8755.11	chr4	+	2284	8	full-splice_match	TMEM33	ENST00000508448.5	867	8	2	-1419	2	684	multi-exon	FALSE	canonical	1	25975	junction_1	197448.56249335897	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	253	942	35.0	-6	True	AATACA	-15
PB.8755.12	chr4	+	2235	8	full-splice_match	TMEM33	ENST00000513702.5	1092	8	6	-1149	6	687	multi-exon	FALSE	canonical	1	59536	junction_1	186409.95390016388	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	201	890	30.0	-2	True	AATACA	-18
PB.8755.13	chr4	+	4834	8	novel_not_in_catalog	TMEM33	novel	7482	7	NA	NA	8	-2056	intron_retention	FALSE	non_canonical	0	0	junction_7	206045.58903132408	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	403	1092	65.0	0	True	TTTAAA	-21
PB.3980.3	chr15	-	2784	15	full-splice_match	ULK3	ENST00000570276.5	2951	15	166	1	13	-1	multi-exon	FALSE	canonical	1	196664	junction_14	131693.70999981475	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	1079	1675	5.0	-31	True	ATTAAA	-12
PB.3980.2	chr15	-	2834	14	novel_in_catalog	ULK3	novel	2623	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	196664	junction_13	136387.83355572325	NA	3	1	TRUE	NA	NA	NA	C	coding	198	597	1129	1725	5.0	3	True	ATTAAA	-12
PB.3980.1	chr15	-	2934	14	novel_in_catalog	ULK3	novel	2623	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	196664	junction_13	136568.0662882651	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	42	686	5.0	3	True	ATTAAA	-12
PB.10923.11	chr7	+	3965	6	novel_not_in_catalog	LINC00996	novel	2043	4	NA	NA	23	31190	any annotated donor/acceptor	FALSE	canonical	1	144	junction_2	32044.24128357543	NA	1	NA	TRUE	NA	NA	NA	B	coding	695	2088	328	2415	60.0	-5	True	NA	NA
PB.3980.6	chr15	-	2897	16	novel_in_catalog	ULK3	novel	2623	16	NA	NA	9	-2	intron_retention	FALSE	canonical	1	14994	junction_15	180219.2147527992	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	1193	1789	5.0	-5	True	ATTAAA	-11
PB.3980.5	chr15	-	2502	16	full-splice_match	ULK3	ENST00000566631.5	1633	16	-15	-854	7	-1	multi-exon	FALSE	canonical	1	18079	junction_14	170470.91145860893	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	326	1393	5.0	-7	True	ATTAAA	-12
PB.3980.4	chr15	-	2579	16	full-splice_match	ULK3	ENST00000440863.6	2623	16	41	3	7	-1	multi-exon	FALSE	canonical	1	178348	junction_11	140705.24999198382	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	52	1470	5.0	-7	True	ATTAAA	-12
PB.2447.1	chr12	-	6554	8	novel_not_in_catalog	CD163L1	novel	815	5	NA	NA	90	27909	intron_retention	FALSE	canonical	1	706	junction_1	36467.815753575574	NA	2	NA	TRUE	NA	NA	NA	B	coding	99	300	717	1016	45.0	-12	True	AATAAA	-14
PB.11020.12	chr8	+	1982	14	full-splice_match	PPP3CC	ENST00000240139.9	2189	14	223	-16	-59	-1	multi-exon	FALSE	canonical	1	144996	junction_12	63230.024205698784	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	105	1643	30.0	35	False	AATAAA	-37
PB.9031.2	chr4	+	2859	8	full-splice_match	ARFIP1	ENST00000405727.6	1601	8	-13	-1245	-13	0	multi-exon	FALSE	canonical	1	56559	junction_1	73586.2657385666	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	144	1169	20.0	-2	True	ATTAAA	-16
PB.11508.9	chr9	-	2209	9	full-splice_match	DCAF12	ENST00000361264.8	3667	9	55	1403	55	-1403	multi-exon	FALSE	canonical	1	502500	junction_8	171037.77069097193	NA	2	NA	TRUE	NA	NA	NA	C	coding	453	1362	288	1649	20.0	19	False	ATTAAA	-32
PB.2547.13	chr12	+	4727	21	novel_in_catalog	LRRK2	novel	9158	51	NA	NA	-2244	1	combination_of_known_junctions	FALSE	canonical	1	18978	junction_20	35694.05662151614	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	40	3210	30.0	1	True	AATAAA	-18
PB.2547.12	chr12	+	4526	20	novel_in_catalog	LRRK2	novel	9158	51	NA	NA	-2245	1	no_combination_of_known_junctions	FALSE	canonical	1	2554	junction_1	46191.43687828824	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	262	3009	30.0	0	True	AATAAA	-18
PB.2547.11	chr12	+	3749	21	novel_in_catalog	LRRK2	novel	9158	51	NA	NA	-2247	-578	combination_of_known_junctions	FALSE	canonical	1	18978	junction_20	35694.05662151614	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	43	3213	10.0	-2	True	AATAAA	-19
PB.2547.10	chr12	+	4546	20	novel_in_catalog	LRRK2	novel	9158	51	NA	NA	-2247	1	no_combination_of_known_junctions	FALSE	canonical	1	2554	junction_1	39455.04771564429	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	264	3029	30.0	-2	True	AATAAA	-18
PB.11068.23	chr8	-	5084	1	genic	DUSP4	novel	NA	NA	NA	NA	-25	-9071	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	221	666	425	1090	60.0	29	False	AAGAAA	-8
PB.2547.14	chr12	+	3592	20	incomplete-splice_match	LRRK2	ENST00000430804.5	6400	30	18459	984	1250	-578	5prime_fragment	FALSE	canonical	1	97302	junction_11	25819.855744354572	NA	9	NA	TRUE	NA	NA	NA	C	coding	921	2766	291	3056	10.0	-6166	False	AATAAA	-19
PB.9031.4	chr4	+	3189	10	novel_not_in_catalog	ARFIP1	novel	3111	9	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	9707	junction_1	96243.17366281807	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	378	1499	20.0	16	True	ATTAAA	-16
PB.9031.5	chr4	+	2931	9	full-splice_match	ARFIP1	ENST00000353617.6	3111	9	179	1	7	-1	multi-exon	FALSE	canonical	1	110770	junction_3	53260.69955168046	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	121	1242	20.0	-26	False	ATTAAA	-15
PB.6003.10	chr19	+	1989	13	novel_not_in_catalog	PLD3	novel	544	4	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	12496	junction_1	723682.6487736709	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	206	1678	15.0	6	True	AGTAAA	-15
PB.6720.13	chr2	-	4031	1	novel_in_catalog	CLASP1	novel	7867	39	NA	NA	138	-10912	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	123	372	298	669	80.0	9	True	NA	NA
PB.11471.1	chr9	+	1566	1	full-splice_match	RRAGA	ENST00000380527.2	1589	1	23	0	23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	313	942	243	1184	20.0	-9	True	ATTAAA	-17
PB.650.1	chr1	-	1307	1	intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.8300.4	chr3	+	1921	6	full-splice_match	GTPBP8	ENST00000383678.6	1360	6	64	-625	-3	32	multi-exon	FALSE	canonical	1	130099	junction_2	33278.31594897795	NA	11	2	TRUE	NA	NA	NA	C	coding	284	855	19	873	15.0	-2	True	NA	NA
PB.9696.9	chr6	-	4206	6	novel_in_catalog	SERPINB9	novel	4118	7	NA	NA	-29	-1203	intron_retention	FALSE	canonical	1	208598	junction_5	80024.69300009841	NA	3	NA	TRUE	NA	NA	NA	C	coding	269	810	120	929	30.0	-1	True	NA	NA
PB.9696.8	chr6	-	3142	8	novel_not_in_catalog	SERPINB9	novel	4118	7	NA	NA	-29	-1202	any annotated donor/acceptor	FALSE	canonical	1	4695	junction_7	165464.9583955985	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	317	1447	25.0	-1	True	NA	NA
PB.9696.7	chr6	-	3483	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	664	-29	-664	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	40.0	-1	True	NA	NA
PB.9696.6	chr6	-	4061	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	86	-29	-86	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	15.0	-1	True	ATTAAA	-20
PB.9696.4	chr6	-	2158	8	novel_not_in_catalog	SERPINB9	novel	4118	7	NA	NA	-29	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136020.77416381091	NA	3	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	35.0	-1	True	AATAAA	-22
PB.9696.3	chr6	-	2292	8	novel_not_in_catalog	SERPINB9	novel	4118	7	NA	NA	-28	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	136020.77416381091	NA	4	1	TRUE	NA	NA	NA	C	coding	376	1131	119	1249	35.0	0	True	AATAAA	-22
PB.9696.1	chr6	-	4141	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	6	-29	-6	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	35.0	-1	True	AATAAA	-22
PB.8081.6	chr3	+	4317	23	novel_in_catalog	DHX30	novel	1464	4	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	2895	junction_4	231168.33754618678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1215	3648	598	4245	20.0	-8	True	AATAAA	-20
PB.8081.7	chr3	+	3746	22	novel_in_catalog	DHX30	novel	1464	4	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	13272	junction_6	273910.1666430553	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	318	3674	20.0	0	True	AATAAA	-20
PB.8081.4	chr3	+	3956	22	novel_in_catalog	DHX30	novel	1464	4	NA	NA	9	0	intron_retention	FALSE	canonical	1	45442	junction_5	245625.7199784178	NA	13	1	TRUE	NA	NA	NA	C	coding	918	2757	335	3091	20.0	-17	True	AATAAA	-20
PB.8081.5	chr3	+	3871	23	full-splice_match	DHX30	ENST00000395745.6	3887	23	16	0	12	0	multi-exon	FALSE	canonical	1	45442	junction_5	242850.57299025301	NA	0	NA	TRUE	NA	NA	NA	C	coding	1155	3468	332	3799	20.0	-14	True	AATAAA	-20
PB.8081.2	chr3	+	4363	24	novel_in_catalog	DHX30	novel	1464	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	4407	junction_5	249526.55898202542	NA	0	NA	TRUE	NA	NA	NA	C	coding	1215	3648	644	4291	20.0	-25	True	AATAAA	-20
PB.8081.3	chr3	+	1928	8	incomplete-splice_match	DHX30	ENST00000445061.5	4065	22	211	7513	1	1	3prime_fragment	FALSE	canonical	1	97210	junction_4	214547.03045576686	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	197	1003	20.0	-25	True	NA	NA
PB.8081.1	chr3	+	3854	22	full-splice_match	DHX30	ENST00000445061.5	4065	22	210	1	0	0	multi-exon	FALSE	canonical	1	97210	junction_4	214826.47507819315	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	198	3782	20.0	-26	True	AATAAA	-20
PB.8081.8	chr3	+	3731	21	novel_in_catalog	DHX30	novel	1464	4	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	13449	junction_3	210775.23068470354	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	171	3659	20.0	1	True	AATAAA	-20
PB.8081.9	chr3	+	3880	18	novel_in_catalog	DHX30	novel	4065	22	NA	NA	-15	0	intron_retention	FALSE	canonical	1	253553	junction_1	149411.57899648024	NA	0	NA	TRUE	NA	NA	NA	C	coding	1006	3021	49	3069	20.0	-2	True	AATAAA	-20
PB.290.5	chr1	+	3109	4	incomplete-splice_match	THRAP3	ENST00000354618.9	4432	12	4	16238	4	-5050	intron_retention	FALSE	canonical	1	552001	junction_2	76555.22682787027	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	221	1306	70.0	-34	True	NA	NA
PB.11110.9	chr8	+	2510	22	novel_not_in_catalog	IKBKB	novel	3938	22	NA	NA	2	-731	any annotated donor/acceptor	FALSE	canonical	1	685	junction_21	105524.38448257494	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	185	2458	25.0	-14	True	AATAAA	-15
PB.7623.1	chr22	-	1151	5	full-splice_match	DGCR6L	ENST00000248879.7	1154	5	0	3	0	-3	multi-exon	FALSE	canonical	1	498751	junction_1	74272.89494997486	NA	1	NA	TRUE	NA	NA	NA	A	coding	220	663	93	755	25.0	875	False	AATAAA	-19
PB.11110.4	chr8	+	3652	19	novel_not_in_catalog	IKBKB	novel	3938	22	NA	NA	1	-4	any annotated donor/acceptor	FALSE	canonical	1	7497	junction_12	121847.38126814348	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	278	1492	40.0	-15	True	NA	NA
PB.11477.13	chr9	-	2072	11	novel_not_in_catalog	MLLT3	novel	6772	11	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	89504.77784922993	NA	5	1	TRUE	NA	NA	NA	C	coding	369	1110	813	1922	25.0	-10	True	AATAAA	-16
PB.10323.6	chr6	-	5316	3	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	-4	-12517	intron_retention	FALSE	canonical	1	80	junction_1	1099.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	108	327	4894	5220	30.0	-1	True	NA	NA
PB.8300.3	chr3	+	3328	1	novel_in_catalog	GTPBP8	novel	1360	6	NA	NA	16	-6658	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	138	417	67	483	60.0	0	True	NA	NA
PB.11110.1	chr8	+	3085	22	full-splice_match	IKBKB	ENST00000520810.6	3938	22	2	851	2	0	multi-exon	FALSE	canonical	1	82115	junction_1	87085.4030442455	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	185	2455	5.0	-14	True	NA	NA
PB.11110.2	chr8	+	3808	22	full-splice_match	IKBKB	ENST00000520810.6	3938	22	1	129	1	15	multi-exon	TRUE	canonical	1	82115	junction_1	87085.4030442455	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	186	2456	40.0	-15	True	NA	NA
PB.11110.3	chr8	+	3740	19	novel_in_catalog	IKBKB	novel	3938	22	NA	NA	1	-1	intron_retention	TRUE	canonical	1	82115	junction_1	93655.30843004331	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	186	1784	5.0	-15	True	AATAGA	-41
PB.9797.8	chr6	+	2430	9	novel_not_in_catalog	BTN3A2	novel	885	4	NA	NA	11	-36	intron_retention	FALSE	canonical	1	7649	junction_5	113052.02510901784	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	176	994	45.0	31	False	NA	NA
PB.6753.9	chr2	+	1524	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-3	5396	0	621	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1491	34	1524	50.0	-30	True	ATTAAA	-43
PB.7573.15	chr21	-	2939	10	novel_not_in_catalog	LSS	novel	2995	23	NA	NA	57	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	193507.1884419061	NA	2	1	TRUE	NA	NA	NA	C	coding	296	891	77	967	30.0	68	False	AATAAA	-18
PB.7573.14	chr21	-	3154	23	novel_not_in_catalog	LSS	novel	2995	23	NA	NA	5	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	152099.86581068407	NA	1	1	TRUE	NA	NA	NA	C	coding	732	2199	73	2271	30.0	-44	True	AATAAA	-18
PB.7573.17	chr21	-	3127	17	incomplete-splice_match	LSS	ENST00000397728.7	4936	22	60	15952	-2	-8722	3prime_fragment	FALSE	canonical	1	268510	junction_5	114246.73089180645	NA	2	NA	TRUE	NA	NA	NA	C	coding	557	1674	20	1693	65.0	9	True	NA	NA
PB.7573.11	chr21	-	4302	23	novel_not_in_catalog	LSS	novel	2995	23	NA	NA	-2	-7	any annotated donor/acceptor	FALSE	canonical	1	5975	junction_6	180690.95870892605	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	26	1708	30.0	3	True	AATAAA	-18
PB.9797.6	chr6	+	2946	11	novel_not_in_catalog	BTN3A2	novel	885	4	NA	NA	-8	-8	intron_retention	FALSE	canonical	1	2120	junction_10	96321.78558893102	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	176	1174	15.0	1	True	AATAAA	-16
PB.3399.1	chr14	+	4090	1	intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7573.12	chr21	-	6733	21	novel_in_catalog	LSS	novel	2995	23	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	268510	junction_9	113761.20751639154	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	32	2044	30.0	-3	True	AATAAA	-18
PB.10648.3	chr7	-	2829	2	incomplete-splice_match	ABCB4	ENST00000644106.1	2112	17	-82	45928	-1	-9889	3prime_fragment	FALSE	canonical	1	21014	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	33	102	283	384	40.0	286	False	AATATA	-20
PB.10648.2	chr7	-	3684	26	novel_not_in_catalog	ABCB4	novel	523	3	NA	NA	-9	-1	any annotated donor/acceptor	TRUE	canonical	1	320	junction_22	22643.609679872152	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	122	3634	40.0	278	False	AATAAA	-21
PB.10648.1	chr7	-	4008	28	full-splice_match	ABCB4	ENST00000649586.1	4269	28	-75	336	5	10	multi-exon	FALSE	canonical	1	21014	junction_27	20444.105188073536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1279	3840	108	3947	30.0	292	False	AATAAA	-32
PB.6742.12	chr2	-	5336	7	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	6961	junction_6	257156.18020361997	NA	3	NA	TRUE	NA	NA	NA	C	coding	195	588	161	748	20.0	-12	True	AATAAA	-17
PB.6884.4	chr2	+	4271	25	novel_not_in_catalog	DNAJC10	novel	5783	23	NA	NA	-22	-101	intron_retention	FALSE	canonical	1	5282	junction_12	242805.8347655334	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	438	1451	30.0	-10	True	AGTAAA	-19
PB.11296.1	chr8	-	3615	8	full-splice_match	ANGPT1	ENST00000520734.5	1526	8	-61	-2028	-61	-2	multi-exon	FALSE	canonical	1	10640	junction_7	30702.95325222255	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	348	1244	30.0	NA	False	AATAAA	-21
PB.6742.13	chr2	-	5320	7	full-splice_match	FAM168B	ENST00000409185.5	5285	7	-36	1	-4	-1	multi-exon	FALSE	canonical	1	14440	junction_6	254485.29414617785	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	145	732	20.0	-17	True	AATAAA	-17
PB.6742.10	chr2	-	5466	8	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	4598	junction_5	296944.6423473162	NA	35	4	TRUE	NA	NA	NA	C	coding	102	309	3034	3342	20.0	8	True	AATAAA	-17
PB.9801.11	chr6	+	3225	9	novel_in_catalog	BTN2A1	novel	2845	7	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	1	19558	junction_8	71312.45159496604	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	219	674	25.0	0	True	NA	NA
PB.6029.2	chr19	+	3547	3	full-splice_match	ZNF526	ENST00000301215.7	4023	3	33	443	33	-443	multi-exon	FALSE	canonical	1	87808	junction_1	20497.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	193	2205	85.0	-21	True	NA	NA
PB.2341.9	chr11	+	3406	8	full-splice_match	TBRG1	ENST00000284290.8	4468	8	-2	1064	-2	-468	multi-exon	FALSE	canonical	1	127819	junction_3	156987.6205987762	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	747	1310	80.0	-2	True	NA	NA
PB.2341.8	chr11	+	4464	8	full-splice_match	TBRG1	ENST00000284290.8	4468	8	-2	6	-2	-6	multi-exon	FALSE	canonical	1	127819	junction_3	156987.6205987762	NA	5	NA	TRUE	NA	NA	NA	C	coding	187	564	747	1310	15.0	-2	True	AATAAA	-16
PB.9801.14	chr6	+	2316	3	incomplete-splice_match	BTN2A1	ENST00000429381.5	3113	8	1	8134	1	-1750	3prime_fragment	FALSE	canonical	1	198965	junction_1	454.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	209	630	212	841	20.0	7	True	ATTAAA	-13
PB.6029.3	chr19	+	2820	3	full-splice_match	ZNF526	ENST00000301215.7	4023	3	54	1149	-52	-1149	multi-exon	FALSE	canonical	1	87808	junction_1	20497.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	172	2184	20.0	0	True	NA	NA
PB.2341.3	chr11	+	1673	9	full-splice_match	TBRG1	ENST00000441174.7	4004	9	-20	2351	-1	-1	multi-exon	FALSE	canonical	1	82164	junction_4	178802.77921218117	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	225	1460	30.0	-15	True	AATAAA	-28
PB.2341.2	chr11	+	3575	7	full-splice_match	TBRG1	ENST00000529543.5	2142	7	-147	-1286	11	-92	multi-exon	FALSE	canonical	1	5153	junction_2	196607.6343429132	NA	4	NA	TRUE	NA	NA	NA	C	coding	187	564	540	1103	45.0	1	True	NA	NA
PB.2341.1	chr11	+	3899	8	full-splice_match	TBRG1	ENST00000473629.6	1634	8	11	-2276	11	-92	multi-exon	FALSE	canonical	1	58598	junction_3	172625.75285352097	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	864	1427	45.0	1	True	NA	NA
PB.8404.9	chr3	+	3451	21	incomplete-splice_match	DNAJC13	ENST00000650455.1	7707	57	78819	1	-16481	-1	5prime_fragment	FALSE	canonical	1	227102	junction_6	63492.2704023096	NA	1	NA	TRUE	NA	NA	NA	C	coding	902	2709	5	2713	30.0	8946	False	AATAAA	-15
PB.2341.7	chr11	+	3785	8	full-splice_match	TBRG1	ENST00000284290.8	4468	8	-5	688	0	-92	multi-exon	FALSE	canonical	1	127819	junction_3	156987.6205987762	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	750	1313	45.0	-5	True	NA	NA
PB.2341.6	chr11	+	3913	9	full-splice_match	TBRG1	ENST00000441174.7	4004	9	-10	101	0	-101	multi-exon	FALSE	canonical	1	82164	junction_4	178802.77921218117	NA	2	NA	TRUE	NA	NA	NA	C	coding	411	1236	215	1450	50.0	-5	True	NA	NA
PB.2341.5	chr11	+	1501	1	novel_in_catalog	TBRG1	novel	1634	8	NA	NA	3	-2571	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	123	372	221	592	95.0	-11	True	NA	NA
PB.2341.4	chr11	+	1538	8	full-splice_match	TBRG1	ENST00000284290.8	4468	8	-11	2941	3	5	multi-exon	FALSE	canonical	1	127819	junction_3	156987.6205987762	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	756	1319	25.0	-11	True	AATAAA	-34
PB.8327.14	chr3	-	1848	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-8	6063	-8	-6063	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	105	1220	20.0	6	True	ATTAAA	-15
PB.6910.29	chr2	-	3951	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	53	306	0	-304	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	3	NA	TRUE	NA	NA	NA	C	coding	750	2253	336	2588	55.0	-38	True	GATAAA	-21
PB.8327.11	chr3	-	3236	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	8	4659	8	-4659	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	89	1204	25.0	22	True	AGTAAA	-21
PB.8327.10	chr3	-	3559	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-8	4352	-8	-4352	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	105	1220	25.0	6	True	NA	NA
PB.8327.13	chr3	-	2290	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-6	5619	-6	-5619	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	103	1218	65.0	8	True	NA	NA
PB.8327.12	chr3	-	2169	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	156	5578	156	-5578	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	0	NA	TRUE	NA	NA	NA	C	coding	45	138	919	1056	65.0	223	False	AATACA	-25
PB.11693.4	chr9	+	3204	3	full-splice_match	ZNF189	ENST00000339664.6	3021	3	-181	-2	-26	2	multi-exon	FALSE	canonical	1	20476	junction_1	57912.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	311	2191	25.0	-43	True	ATTAAA	-25
PB.11781.2	chr9	-	2016	6	incomplete-splice_match	PSMB7	ENST00000259457.7	980	8	-3	29703	2	427	3prime_fragment	FALSE	canonical	1	2817209	junction_3	325483.56829284027	NA	0	NA	TRUE	NA	NA	NA	B	coding	208	627	18	644	60.0	-4	True	AATACA	-3
PB.11693.5	chr9	+	3286	4	full-splice_match	ZNF189	ENST00000259395.4	3115	4	-173	2	-18	-2	multi-exon	FALSE	canonical	1	21891	junction_2	49652.325493262535	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	526	2277	20.0	-35	True	ATTAAA	-21
PB.3362.1	chr14	+	3519	5	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	45	11556	any annotated donor/acceptor	FALSE	canonical	1	490	junction_3	1255.8588694594628	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-81	False	NA	NA
PB.6029.4	chr19	+	2705	2	novel_in_catalog	ZNF526	novel	4023	3	NA	NA	-28	-1149	no_combination_of_known_junctions	FALSE	canonical	1	692	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	57	2069	20.0	24	True	NA	NA
PB.11296.3	chr8	-	3406	8	full-splice_match	ANGPT1	ENST00000520734.5	1526	8	-46	-1834	-46	-185	multi-exon	FALSE	canonical	1	10640	junction_7	30702.95325222255	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	333	1229	20.0	NA	False	AATGAA	-43
PB.11693.7	chr9	+	5159	3	full-splice_match	ZNF189	ENST00000374861.7	3134	3	-18	-2007	-18	2007	multi-exon	FALSE	canonical	1	65305	junction_1	35497.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	303	2141	85.0	-35	True	NA	NA
PB.9052.1	chr4	-	2327	3	incomplete-splice_match	TRIM61	ENST00000329314.5	1582	5	7	13836	7	-13836	3prime_fragment	FALSE	canonical	1	32970	junction_2	14669.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	471	1416	607	2022	20.0	17	False	AATAAA	-22
PB.4556.11	chr16	-	2301	3	full-splice_match	TMEM170A	ENST00000357613.8	4959	3	-2	2660	-2	0	multi-exon	FALSE	canonical	1	100006	junction_1	25436.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	92	457	95.0	-23	True	NA	NA
PB.4556.10	chr16	-	2358	3	full-splice_match	TMEM170A	ENST00000569540.5	2331	3	-27	0	-27	0	multi-exon	FALSE	canonical	1	37891	junction_2	47704.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	106	321	194	514	95.0	-13	True	NA	NA
PB.7902.15	chr3	+	3078	8	novel_in_catalog	TRNT1	novel	2276	8	NA	NA	5	-172	combination_of_known_junctions	FALSE	canonical	1	13906	junction_1	73067.63660151197	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	1164	2381	30.0	19	True	AATAAA	-23
PB.7902.14	chr3	+	4425	10	full-splice_match	TRNT1	ENST00000434583.5	1871	10	-7	-2547	4	2547	multi-exon	FALSE	canonical	1	28041	junction_9	76071.53772162972	NA	5	NA	TRUE	NA	NA	NA	C	coding	405	1218	148	1365	20.0	7	True	AATAAA	-12
PB.7902.16	chr3	+	4286	9	novel_in_catalog	TRNT1	novel	2276	8	NA	NA	-5	1536	no_combination_of_known_junctions	FALSE	canonical	1	5295	junction_3	95940.7255469979	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	1159	1461	85.0	-91	False	NA	NA
PB.7902.11	chr3	+	4726	9	incomplete-splice_match	TRNT1	ENST00000434583.5	1871	10	-14	-1535	0	1535	intron_retention	FALSE	canonical	1	38165	junction_8	62239.55983825219	NA	6	NA	TRUE	NA	NA	NA	C	coding	405	1218	155	1372	85.0	0	True	NA	NA
PB.7902.10	chr3	+	3208	8	novel_in_catalog	TRNT1	novel	2276	8	NA	NA	-2	-63	combination_of_known_junctions	FALSE	canonical	1	13906	junction_1	73067.63660151197	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	1185	2402	35.0	-2	True	ATTAAA	-19
PB.7902.13	chr3	+	2475	8	novel_in_catalog	TRNT1	novel	2276	8	NA	NA	0	-62	combination_of_known_junctions	FALSE	canonical	1	8281	junction_1	74935.53251853713	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	451	1668	35.0	3	True	ATTAAA	-20
PB.7902.12	chr3	+	1647	1	novel_in_catalog	TRNT1	novel	2276	8	NA	NA	0	-898	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1	True	NA	NA
PB.3362.5	chr14	+	3092	3	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	124	11549	any annotated donor/acceptor	FALSE	canonical	1	1775	junction_2	210.5	NA	15	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-2	True	NA	NA
PB.5704.5	chr19	-	2620	6	novel_in_catalog	KEAP1	novel	2955	6	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	1	4534	junction_5	312255.6469109245	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	220	2094	10.0	467	False	AATAAA	-24
PB.5704.4	chr19	-	2757	6	novel_in_catalog	KEAP1	novel	2955	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	4569	junction_5	312242.55090323614	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	357	2231	10.0	8	True	AATAAA	-24
PB.5704.3	chr19	-	2024	5	novel_not_in_catalog	KEAP1	novel	2955	6	NA	NA	-36	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	389253.7938636565	NA	1	1	TRUE	NA	NA	NA	C	coding	421	1266	75	1340	5.0	2	True	AATAAA	-25
PB.5704.2	chr19	-	2474	6	full-splice_match	KEAP1	ENST00000393623.6	2648	6	139	35	-70	-35	multi-exon	FALSE	canonical	1	120139	junction_5	269495.6388221524	NA	5	NA	TRUE	NA	NA	NA	C	coding	624	1875	109	1983	65.0	13	True	NA	NA
PB.5704.1	chr19	-	2606	6	full-splice_match	KEAP1	ENST00000171111.9	2955	6	398	-49	-157	49	multi-exon	FALSE	canonical	1	105367	junction_5	274896.6945509531	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	151	2025	30.0	-16	True	NA	NA
PB.6511.6	chr2	-	1422	6	full-splice_match	RAB1A	ENST00000409784.7	2447	6	0	1025	0	-9	multi-exon	FALSE	canonical	1	674809	junction_4	307029.88118318387	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	192	809	40.0	-7	True	AATAAA	-20
PB.3362.7	chr14	+	4314	6	novel_not_in_catalog	AL136018.1	novel	636	3	NA	NA	-127	11549	any annotated donor/acceptor	FALSE	canonical	1	98	junction_2	1356.929858172485	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	9	True	NA	NA
PB.8507.1	chr3	-	1849	8	full-splice_match	PDCD10	ENST00000497056.6	1276	8	29	-602	-9	-12	multi-exon	FALSE	canonical	1	646643	junction_7	140545.53947023573	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	219	851	50.0	-10	True	AATAAA	-4
PB.8507.3	chr3	-	1314	9	full-splice_match	PDCD10	ENST00000473645.6	1360	9	47	-1	0	1	multi-exon	FALSE	canonical	1	228037	junction_7	324074.9254076902	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	283	915	40.0	-1	True	AATAAA	-16
PB.2466.2	chr12	-	1754	9	full-splice_match	YBX3	ENST00000279550.11	1708	9	-45	-1	-40	1	multi-exon	FALSE	canonical	1	86693	junction_8	886735.956448529	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	242	1153	30.0	-30	True	AATAAA	-21
PB.8507.5	chr3	-	1269	8	novel_in_catalog	PDCD10	novel	2067	9	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	1	11390	junction_7	342933.6751504642	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	238	870	40.0	347	False	AATAAA	-16
PB.8507.4	chr3	-	1361	9	full-splice_match	PDCD10	ENST00000475915.6	849	9	-82	-430	-48	1	multi-exon	FALSE	canonical	1	6373	junction_8	377512.43922278576	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	330	962	40.0	328	False	AATAAA	-16
PB.8507.6	chr3	-	2526	7	novel_in_catalog	PDCD10	novel	2067	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	646643	junction_6	150646.46534924814	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	1763	2128	35.0	-1	True	AATAAA	-15
PB.2823.16	chr12	+	2061	9	full-splice_match	TMPO	ENST00000556029.5	4242	9	93	2088	-13	427	multi-exon	FALSE	canonical	1	233400	junction_7	193722.54944765722	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	264	1628	55.0	-27	True	AATAAA	-16
PB.2823.17	chr12	+	3663	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-7	-31	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	6	1	TRUE	NA	NA	NA	C	coding	454	1365	258	1622	35.0	-21	True	AATAAA	-18
PB.2823.14	chr12	+	3374	9	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-14	-69	intron_retention	FALSE	canonical	0	0	junction_8	291025.63615201926	NA	3	1	TRUE	NA	NA	NA	C	coding	414	1245	265	1509	25.0	-28	True	AATAAA	-15
PB.1011.26	chr1	-	1609	11	novel_not_in_catalog	UCHL5	novel	5327	11	NA	NA	14	-3	any annotated donor/acceptor	FALSE	canonical	1	2895	junction_10	208924.18949169098	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	403	1020	25.0	-57	True	AATAAA	-21
PB.2823.12	chr12	+	3626	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-17	-69	intron_retention	FALSE	non_canonical	0	0	junction_9	250047.6051562883	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	268	1632	25.0	-31	True	AATAAA	-15
PB.2823.13	chr12	+	3590	10	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-13	-31	intron_retention	TRUE	canonical	1	1882	junction_9	249644.02497175607	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	264	1628	35.0	-27	True	AATAAA	-18
PB.2823.10	chr12	+	3225	7	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	12	-31	intron_retention	FALSE	non_canonical	0	0	junction_6	303898.7158113794	NA	1	1	TRUE	NA	NA	NA	C	coding	345	1038	278	1315	35.0	-41	True	AATAAA	-18
PB.2823.11	chr12	+	1762	9	full-splice_match	TMPO	ENST00000556029.5	4242	9	93	2387	-13	128	multi-exon	FALSE	canonical	1	233400	junction_7	193722.54944765722	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	264	1628	65.0	-27	True	AATAAA	-19
PB.8671.15	chr4	-	2682	18	full-splice_match	NOP14	ENST00000416614.6	3538	18	-22	878	-22	-698	multi-exon	FALSE	canonical	1	289308	junction_17	110200.89458842867	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2574	89	2662	35.0	-2	True	AATAAA	-20
PB.8671.14	chr4	-	2606	17	full-splice_match	NOP14	ENST00000398071.4	2535	17	-72	1	-20	-1	multi-exon	FALSE	canonical	1	602	junction_1	140851.80432572562	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	87	2507	20.0	0	True	AATAGA	-17
PB.290.4	chr1	+	3644	12	full-splice_match	THRAP3	ENST00000354618.9	4432	12	1	787	1	422	multi-exon	FALSE	canonical	1	214552	junction_6	189387.10847654712	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	224	3091	20.0	-37	True	AATAAA	-20
PB.12266.1	chrX	-	4469	20	full-splice_match	IGSF1	ENST00000361420.7	4378	20	-93	2	-33	0	multi-exon	TRUE	canonical	1	13694	junction_17	19796.076702859198	NA	0	NA	TRUE	NA	NA	NA	C	coding	1336	4011	174	4184	30.0	98	False	AATAAA	-24
PB.8671.10	chr4	-	3388	18	full-splice_match	NOP14	ENST00000416614.6	3538	18	-31	181	-31	-1	multi-exon	FALSE	canonical	1	289308	junction_17	110200.89458842867	NA	1	NA	TRUE	NA	NA	NA	C	coding	857	2574	98	2671	20.0	-11	True	AATAGA	-17
PB.2823.18	chr12	+	3422	5	novel_not_in_catalog	TMPO	novel	4242	9	NA	NA	-7	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	255590.05114575077	NA	1	1	TRUE	NA	NA	NA	C	coding	392	1179	959	2137	15.0	-21	True	AATAAA	-14
PB.12266.2	chrX	-	1828	5	full-splice_match	IGSF1	ENST00000370901.4	1820	5	-11	3	-11	-3	multi-exon	FALSE	canonical	1	13694	junction_2	19785.975037573964	NA	3	NA	TRUE	NA	NA	NA	C	coding	242	729	152	880	25.0	-12	True	NA	NA
PB.9897.1	chr6	-	2633	7	incomplete-splice_match	PBX2	ENST00000375050.5	3205	9	1696	-8	326	8	5prime_fragment	FALSE	canonical	1	10545	junction_1	61552.35048517644	NA	3	NA	TRUE	NA	NA	NA	A	coding	315	948	37	984	20.0	7922	False	AATAAA	-22
PB.2595.1	chr12	-	3968	1	incomplete-splice_match	FMNL3	ENST00000335154.9	12634	26	62724	4224	-5547	-2781	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	412	False	NA	NA
PB.11932.1	chr9	+	5057	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	13	-3	combination_of_known_junctions	TRUE	canonical	1	25745	junction_1	95795.36006904718	NA	3	NA	TRUE	NA	NA	NA	C	coding	1267	3804	83	3886	30.0	-35	False	AATAAA	-17
PB.432.1	chr1	+	2924	10	novel_not_in_catalog	LEXM	novel	1777	11	NA	NA	-4688	1208	any annotated donor/acceptor	FALSE	canonical	1	460	junction_1	645.328340201069	NA	10	1	TRUE	NA	NA	NA	A	coding	334	1005	333	1337	75.0	-5504	False	AATAAA	-43
PB.10780.15	chr7	+	1977	10	incomplete-splice_match	DLD	ENST00000440410.5	1993	13	12296	-251	-34	251	5prime_fragment	FALSE	canonical	1	868536	junction_5	188638.5183075926	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	40	1272	25.0	NA	False	AATAAA	-15
PB.10780.10	chr7	+	3924	14	full-splice_match	DLD	ENST00000205402.9	3755	14	194	-363	0	363	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	88	1617	85.0	-19	True	NA	NA
PB.10780.11	chr7	+	3731	13	novel_in_catalog	DLD	novel	3755	14	NA	NA	0	260	intron_retention	FALSE	canonical	1	716966	junction_2	213871.9242726272	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	1854	3017	25.0	-9	True	AATAAA	-24
PB.10780.12	chr7	+	2310	14	full-splice_match	DLD	ENST00000205402.9	3755	14	206	1239	2	251	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	76	1605	25.0	-7	True	AATAAA	-15
PB.10780.13	chr7	+	5541	11	novel_in_catalog	DLD	novel	3755	14	NA	NA	3	28	intron_retention	FALSE	canonical	1	716966	junction_2	164160.75314462348	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	1851	2363	20.0	-6	True	TATAAA	-16
PB.11214.1	chr8	+	1600	8	novel_not_in_catalog	E2F5	novel	1890	8	NA	NA	-27	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	88417.68786797338	NA	0	NA	TRUE	NA	NA	NA	A	coding	185	558	389	946	20.0	-20	True	AATAAA	-17
PB.11932.5	chr9	+	4592	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	0	-31	combination_of_known_junctions	FALSE	canonical	1	65644	junction_6	99956.0684949463	NA	1	NA	TRUE	NA	NA	NA	C	coding	1265	3798	38	3835	80.0	-19	True	AATAAA	-36
PB.9297.5	chr5	+	3082	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	63	1440	-1	-94	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	94	2760	30.0	10	True	AATATA	-22
PB.9440.17	chr5	+	3268	18	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	41	37135	41	-130	3prime_fragment	FALSE	canonical	1	187739	junction_1	91344.31697513524	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2922	347	3268	50.0	0	True	NA	NA
PB.9440.14	chr5	+	3477	16	novel_in_catalog	AC116366.3	novel	7893	27	NA	NA	107325	-37413	intron_retention	FALSE	canonical	1	187739	junction_1	96167.6694523338	NA	1	NA	TRUE	NA	NA	NA	B	coding	716	2148	1329	3476	65.0	-2	True	NA	NA
PB.9440.15	chr5	+	3184	19	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	176	37011	-117	-6	3prime_fragment	FALSE	canonical	1	187739	junction_1	96438.3322457868	NA	1	NA	TRUE	NA	NA	NA	C	coding	991	2973	212	3184	75.0	-154	False	AATAAA	-28
PB.9440.12	chr5	+	2468	14	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	224	42947	-69	-8	3prime_fragment	FALSE	canonical	1	187739	junction_1	82760.27464033924	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2304	164	2467	50.0	-44	True	AATAGA	-29
PB.9440.13	chr5	+	2679	17	novel_not_in_catalog	AC116366.3	novel	7893	27	NA	NA	107320	-37413	any annotated donor/acceptor	FALSE	canonical	1	752	junction_1	122215.02633088369	NA	0	NA	TRUE	NA	NA	NA	B	coding	824	2472	207	2678	65.0	-7	True	NA	NA
PB.9440.10	chr5	+	1565	8	incomplete-splice_match	RAD50	ENST00000453394.5	2076	12	-262	6924	31	37	3prime_fragment	FALSE	canonical	1	187739	junction_1	78164.26721374175	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1209	357	1565	55.0	-10	True	ATTAAA	-28
PB.12296.1	chrX	-	6158	30	novel_in_catalog	ATP11C	novel	6924	29	NA	NA	879	-1	combination_of_known_junctions	FALSE	canonical	1	90679	junction_29	33777.319534201895	NA	0	NA	TRUE	NA	NA	NA	B	coding	1129	3390	150	3539	15.0	835	False	AATAAA	-22
PB.3881.1	chr15	+	2107	4	novel_not_in_catalog	UNC13C	novel	9216	32	NA	NA	-25381	-99	any annotated donor/acceptor	FALSE	canonical	1	27026	junction_1	34411.506857768116	NA	1	NA	TRUE	NA	NA	NA	A	coding	180	543	70	612	10.0	-26	True	AATAAA	-27
PB.12296.2	chrX	-	6165	30	novel_not_in_catalog	ATP11C	novel	6924	29	NA	NA	284	0	any annotated donor/acceptor	FALSE	canonical	1	7556	junction_29	45123.98049169623	NA	0	NA	TRUE	NA	NA	NA	B	coding	1116	3351	264	3614	20.0	240	False	AATAAA	-20
PB.9440.18	chr5	+	2953	17	incomplete-splice_match	RAD50	ENST00000378823.7	8306	25	224	37658	-69	-653	3prime_fragment	FALSE	canonical	1	187739	junction_1	93921.60896693317	NA	0	NA	TRUE	NA	NA	NA	C	coding	930	2790	164	2953	75.0	-44	True	AAAAAG	-12
PB.9440.19	chr5	+	5821	25	full-splice_match	RAD50	ENST00000378823.7	8306	25	41	2444	41	719	multi-exon	FALSE	canonical	1	187739	junction_1	86847.21826479725	NA	0	NA	TRUE	NA	NA	NA	C	coding	1312	3939	347	4285	45.0	0	True	NA	NA
PB.10416.14	chr7	-	3223	26	full-splice_match	SNX13	ENST00000428135.7	6357	26	-15	3149	-8	-146	multi-exon	FALSE	canonical	1	157770	junction_25	35536.346568638706	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	215	3088	15.0	-19	True	AATACA	-6
PB.10416.15	chr7	-	2116	19	incomplete-splice_match	SNX13	ENST00000428135.7	6357	26	1	25456	1	3	3prime_fragment	FALSE	canonical	1	157770	junction_18	39229.78393586079	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1917	199	2115	65.0	-3	True	AAAAAG	-32
PB.10416.12	chr7	-	3647	25	novel_in_catalog	SNX13	novel	6357	26	NA	NA	-5	-25	no_combination_of_known_junctions	FALSE	canonical	1	3575	junction_10	54953.27316405009	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	212	1819	70.0	-16	True	AATAAA	-10
PB.10416.13	chr7	-	3249	26	novel_in_catalog	SNX13	novel	6357	26	NA	NA	-1	-146	combination_of_known_junctions	FALSE	canonical	1	21313	junction_9	51725.351136385725	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	208	3114	15.0	-12	True	AATACA	-6
PB.10416.10	chr7	-	3723	26	novel_in_catalog	SNX13	novel	6357	26	NA	NA	-2	-10	combination_of_known_junctions	FALSE	canonical	1	21313	junction_9	51725.351136385725	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	202	3108	45.0	-6	True	AATAAA	-25
PB.10416.11	chr7	-	3738	27	novel_in_catalog	SNX13	novel	6357	26	NA	NA	1	-25	combination_of_known_junctions	FALSE	canonical	1	3041	junction_26	65964.68848321706	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	505	3138	70.0	23	False	AATAAA	-10
PB.3900.2	chr15	+	1487	9	full-splice_match	CCNB2	ENST00000288207.6	1556	9	68	1	-11	0	multi-exon	FALSE	canonical	1	350014	junction_8	142254.33560594032	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	124	1320	20.0	0	True	AATAAA	-22
PB.3900.1	chr15	+	2661	8	full-splice_match	CCNB2	ENST00000621385.1	2503	8	-158	0	-15	0	multi-exon	FALSE	canonical	1	554563	junction_2	100441.25982861417	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	159	1283	20.0	-35	True	AATAAA	-22
PB.2677.9	chr12	-	2820	11	novel_in_catalog	CS	novel	2811	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	16385	junction_4	193066.8203830995	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	121	1014	30.0	8	True	AATAAA	-15
PB.8430.15	chr3	-	3528	23	novel_in_catalog	COPB2	novel	433	4	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	1	3441	junction_22	437116.19784828485	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	621	3254	15.0	-15	True	CATAAA	-17
PB.8430.16	chr3	-	3375	23	novel_in_catalog	COPB2	novel	433	4	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	1	4315	junction_22	437006.4899427521	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	468	3101	15.0	-12	True	CATAAA	-17
PB.8430.17	chr3	-	3230	23	novel_in_catalog	COPB2	novel	433	4	NA	NA	-10	-66	combination_of_known_junctions	FALSE	canonical	1	61264	junction_22	429963.8544837373	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	393	3026	35.0	-16	True	TTTAAA	-23
PB.8430.10	chr3	-	3293	22	novel_in_catalog	COPB2	novel	433	4	NA	NA	-3	-57	combination_of_known_junctions	FALSE	canonical	1	19845	junction_21	364009.3863134753	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	260	2893	35.0	-1	True	ACTAAA	-12
PB.8430.12	chr3	-	3074	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	53	233	1	-46	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	130	2850	30.0	-37	False	ACTAAA	-17
PB.8430.13	chr3	-	4032	20	novel_in_catalog	COPB2	novel	433	4	NA	NA	-6	4	intron_retention	FALSE	canonical	1	930352	junction_19	260110.346473097	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	1953	3758	15.0	-12	True	CATAAA	-17
PB.2677.1	chr12	-	3536	10	novel_in_catalog	CS	novel	2811	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	78111	junction_7	329551.5031605197	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	949	2151	35.0	-8	True	AATAAA	-18
PB.2677.3	chr12	-	3136	12	novel_in_catalog	CS	novel	2811	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	13594	junction_11	335226.25937397534	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	549	1751	35.0	-16	True	AATAAA	-18
PB.2677.2	chr12	-	3449	10	novel_in_catalog	CS	novel	2811	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	12583	junction_9	348676.04204985977	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	862	2064	35.0	11	True	AATAAA	-18
PB.2677.5	chr12	-	2943	11	novel_in_catalog	CS	novel	2811	11	NA	NA	-3	0	intron_retention	FALSE	canonical	1	12371	junction_10	330810.7095086403	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	356	1558	35.0	-4	True	AATAAA	-18
PB.2677.4	chr12	-	3059	12	full-splice_match	CS	ENST00000548567.5	3057	12	0	-2	0	0	multi-exon	FALSE	canonical	1	22739	junction_11	332825.5322155965	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	472	1674	35.0	-19	True	AATAAA	-18
PB.2677.7	chr12	-	2848	12	novel_in_catalog	CS	novel	2811	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	3952	junction_11	322835.31647296326	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	63	1463	35.0	-16	True	AATAAA	-18
PB.2677.6	chr12	-	2900	10	novel_in_catalog	CS	novel	2811	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	31126	junction_7	327990.05913711083	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	181	1515	35.0	-9	True	AATAAA	-18
PB.2726.21	chr12	+	3624	24	novel_in_catalog	XPOT	novel	6414	25	NA	NA	112	-2441	no_combination_of_known_junctions	FALSE	canonical	1	1640	junction_8	212025.24355240245	NA	0	NA	TRUE	NA	NA	NA	C	coding	883	2652	418	3069	20.0	1	True	AATAAA	-18
PB.2726.20	chr12	+	3920	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	112	-2446	any annotated donor/acceptor	FALSE	canonical	1	574	junction_24	208695.11344126484	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	418	3267	25.0	1	True	AATAAA	-13
PB.2726.23	chr12	+	3908	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	116	-2446	any annotated donor/acceptor	FALSE	canonical	1	4935	junction_9	210575.27506669532	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	1514	3358	25.0	5	True	AATAAA	-13
PB.2726.22	chr12	+	5114	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	112	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	206164.39558738944	NA	1	NA	TRUE	NA	NA	NA	C	coding	962	2889	418	3306	40.0	1	True	AATAAA	-15
PB.2726.25	chr12	+	3772	25	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	166	-2448	any annotated donor/acceptor	FALSE	canonical	1	98	junction_1	210279.23188531015	NA	8	3	TRUE	NA	NA	NA	C	coding	962	2889	336	3224	25.0	-5477	False	AATAAA	-11
PB.2726.24	chr12	+	3667	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	116	2631	116	-2631	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	414	3302	25.0	5	True	TATAAA	-14
PB.1073.8	chr1	+	3531	21	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	202	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	105737.14638082495	NA	5	1	TRUE	NA	NA	NA	C	coding	519	1560	646	2205	20.0	NA	False	AATAAA	-24
PB.1048.1	chr1	-	3009	3	full-splice_match	FMOD	ENST00000354955.4	3310	3	300	1	-101	-1	multi-exon	FALSE	canonical	1	201167	junction_1	27245.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	376	1131	165	1295	35.0	-68	False	AATAAA	-17
PB.1810.3	chr11	+	2969	17	novel_in_catalog	ZNF143	novel	555	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	5373	junction_3	65449.72125310676	NA	1	1	TRUE	NA	NA	NA	C	coding	435	1308	752	2059	25.0	0	True	AATACA	-18
PB.4086.10	chr15	-	2918	14	novel_in_catalog	PRC1	novel	3034	15	NA	NA	6	5	combination_of_known_junctions	FALSE	canonical	1	24079	junction_13	277819.7804026813	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	126	1832	40.0	15	True	NA	NA
PB.1810.1	chr11	+	2446	16	full-splice_match	ZNF143	ENST00000396602.6	2947	16	44	457	3	13	multi-exon	FALSE	canonical	1	120244	junction_2	33363.93621861785	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	76	1992	15.0	-3	True	AATAAA	-31
PB.4086.12	chr15	-	2552	15	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-32	5	combination_of_known_junctions	FALSE	canonical	1	29805	junction_1	243595.3291105759	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	153	2018	40.0	81	False	NA	NA
PB.12392.1	chrY	+	1319	7	full-splice_match	EIF1AY	ENST00000361365.6	1390	7	80	-9	11	9	multi-exon	FALSE	canonical	1	278936	junction_3	75145.99079347702	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	68	502	30.0	7	True	AATAAA	-23
PB.1810.6	chr11	+	2602	16	full-splice_match	ZNF143	ENST00000530463.5	2022	16	38	-618	1	-50	multi-exon	FALSE	canonical	1	66617	junction_4	41295.09283002037	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	71	1984	50.0	2	True	NA	NA
PB.12392.3	chrY	+	4327	1	novel_in_catalog	EIF1AY	novel	1390	7	NA	NA	19	-8459	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-32	True	NA	NA
PB.12392.2	chrY	+	2104	1	novel_in_catalog	EIF1AY	novel	1390	7	NA	NA	2	-10699	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.6753.1	chr2	+	3343	10	full-splice_match	CCNT2	ENST00000295238.10	4491	10	-64	1212	-61	967	multi-exon	TRUE	canonical	1	125117	junction_6	49775.05278329946	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	95	2086	80.0	-7124	False	ATTAAA	-28
PB.7026.1	chr2	+	1418	8	full-splice_match	STK16	ENST00000409638.7	2868	8	19	1431	1	2	multi-exon	FALSE	canonical	1	109345	junction_1	105320.31175012187	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	154	1071	15.0	-24	True	AATAAA	-21
PB.7298.9	chr20	+	3491	5	incomplete-splice_match	SRSF6	ENST00000244020.4	4325	6	409	645	409	-645	5prime_fragment	FALSE	canonical	1	186816	junction_1	289709.5884703982	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	305	952	25.0	-7	True	AATAAA	-15
PB.7298.8	chr20	+	3980	7	full-splice_match	SRSF6	ENST00000483871.6	1680	7	-32	-2268	-32	-645	multi-exon	FALSE	canonical	1	103454	junction_2	264136.1231009601	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	794	1441	25.0	0	True	AATAAA	-15
PB.7298.7	chr20	+	3065	5	novel_in_catalog	SRSF6	novel	1680	7	NA	NA	-34	358	intron_retention	FALSE	canonical	1	389442	junction_1	235891.61372479418	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	1876	2436	30.0	-2	True	AATAAA	-21
PB.7298.6	chr20	+	2923	5	novel_in_catalog	SRSF6	novel	1680	7	NA	NA	-35	215	intron_retention	FALSE	canonical	1	389442	junction_1	235891.61372479418	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	1877	2437	35.0	-3	True	AATAAA	-12
PB.7298.5	chr20	+	3715	6	full-splice_match	SRSF6	ENST00000244020.4	4325	6	-35	645	-35	-645	multi-exon	FALSE	canonical	1	186816	junction_2	266212.850388256	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	142	1176	25.0	-3	True	AATAAA	-15
PB.7298.4	chr20	+	1509	6	full-splice_match	SRSF6	ENST00000244020.4	4325	6	-35	2851	-35	62	multi-exon	FALSE	canonical	1	186816	junction_2	266212.850388256	NA	3	NA	TRUE	NA	NA	NA	C	coding	344	1035	142	1176	10.0	-3	True	NA	NA
PB.7298.3	chr20	+	1665	6	full-splice_match	SRSF6	ENST00000244020.4	4325	6	-37	2697	-37	216	multi-exon	FALSE	canonical	1	186816	junction_2	266212.850388256	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	144	1178	30.0	-5	True	AATAAA	-13
PB.7298.2	chr20	+	1961	7	full-splice_match	SRSF6	ENST00000483871.6	1680	7	-63	-218	-63	218	multi-exon	FALSE	canonical	1	103454	junction_2	264136.1231009601	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	912	1472	30.0	-2	True	AATAAA	-15
PB.7298.1	chr20	+	1888	6	full-splice_match	SRSF6	ENST00000244020.4	4325	6	-34	2471	-34	442	multi-exon	FALSE	canonical	1	186816	junction_2	266212.850388256	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	141	1175	20.0	-2	True	AATAAA	-16
PB.11607.2	chr9	-	5113	8	novel_in_catalog	CARNMT1	novel	4130	8	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	17551	junction_7	47923.98256082017	NA	4	NA	TRUE	NA	NA	NA	C	coding	330	993	1377	2369	25.0	-7	True	ATTAAA	-18
PB.1728.1	chr10	+	1407	11	full-splice_match	MTG1	ENST00000317502.10	1560	11	-36	189	-36	17	multi-exon	FALSE	canonical	1	301150	junction_1	132961.80461249012	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	87	1091	40.0	-22	True	NA	NA
PB.7289.21	chr20	+	4767	30	novel_not_in_catalog	RALGAPB	novel	8652	30	NA	NA	-3	-8	any annotated donor/acceptor	FALSE	canonical	1	105	junction_21	67907.35917530654	NA	11	1	TRUE	NA	NA	NA	C	coding	1056	3171	204	3374	25.0	4	True	AATAAA	-9
PB.1728.3	chr10	+	3421	11	full-splice_match	MTG1	ENST00000317502.10	1560	11	-12	-1849	-12	1212	multi-exon	FALSE	canonical	1	301150	junction_1	132961.80461249012	NA	2	1	TRUE	NA	NA	NA	C	coding	334	1005	63	1067	25.0	2	True	NA	NA
PB.1728.2	chr10	+	1943	10	full-splice_match	MTG1	ENST00000460848.5	2730	10	-39	826	-14	17	multi-exon	FALSE	canonical	1	301150	junction_1	132591.7047615734	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	65	868	40.0	0	True	NA	NA
PB.10215.1	chr6	-	2335	5	full-splice_match	CTGF	ENST00000367976.3	2339	5	0	4	0	-4	multi-exon	TRUE	canonical	1	782231	junction_4	1420466.9772021058	NA	0	NA	TRUE	NA	NA	NA	A	coding	349	1050	202	1251	25.0	-2	True	AATAAA	-17
PB.3683.1	chr14	-	1423	8	full-splice_match	CKB	ENST00000348956.6	1709	8	279	7	1	2	multi-exon	FALSE	canonical	1	710209	junction_7	1080245.012458861	NA	0	NA	TRUE	NA	NA	NA	A	coding	381	1146	80	1225	5.0	-3	True	AATAAA	-20
PB.11742.3	chr9	+	2749	15	novel_in_catalog	ZNF618	novel	3018	15	NA	NA	31	-67	no_combination_of_known_junctions	TRUE	canonical	1	7539	junction_7	29642.035375528478	NA	1	NA	TRUE	NA	NA	NA	B	coding	893	2679	69	2747	35.0	4	True	AATAAA	-18
PB.9166.9	chr5	-	4325	18	novel_in_catalog	ZFR	novel	4738	20	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	2791	junction_16	212343.83238459867	NA	4	NA	TRUE	NA	NA	NA	C	coding	912	2739	178	2916	20.0	-38	False	AGTAAA	-16
PB.9166.8	chr5	-	4364	19	novel_not_in_catalog	ZFR	novel	4738	20	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	204801.24715229592	NA	2	1	TRUE	NA	NA	NA	C	coding	951	2856	100	2955	20.0	-7	True	AGTAAA	-16
PB.6892.1	chr2	-	4114	15	full-splice_match	CALCRL	ENST00000392370.7	5155	15	208	833	0	-833	multi-exon	FALSE	canonical	1	36466	junction_14	25907.23778036098	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	507	1892	15.0	-1	True	AATAAA	-17
PB.9166.5	chr5	-	4099	18	novel_not_in_catalog	ZFR	novel	4738	20	NA	NA	0	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	227298.97703828436	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	938	2689	20.0	1	True	AGTAAA	-17
PB.11607.4	chr9	-	4775	8	novel_not_in_catalog	CARNMT1	novel	4130	8	NA	NA	-42	-3	any annotated donor/acceptor	FALSE	canonical	1	3136	junction_7	52410.08274820285	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	1009	2031	25.0	9	True	ATTAAA	-18
PB.9000.3	chr4	+	1653	9	novel_not_in_catalog	ZNF330	novel	733	2	NA	NA	-1	-200	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	212136.32577351644	NA	2	NA	TRUE	NA	NA	NA	B	coding	319	960	186	1145	20.0	-31	True	ATTAAA	-32
PB.9166.3	chr5	-	4617	19	novel_in_catalog	ZFR	novel	4738	20	NA	NA	2	2	combination_of_known_junctions	TRUE	canonical	1	47165	junction_4	214514.21302015005	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2646	79	2724	20.0	3	True	AGTAAA	-19
PB.9116.1	chr5	-	2272	1	antisense	novelGene_AHRR_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2714.8	chr12	-	2306	1	incomplete-splice_match	CTDSP2	ENST00000398073.6	4795	8	24502	5	2306	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	4066	False	AATAAA	-23
PB.1127.1	chr1	+	5431	3	incomplete-splice_match	LYPLAL1	ENST00000366928.9	1898	5	6	14585	6	4795	3prime_fragment	FALSE	canonical	1	256380	junction_2	69857.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	42	425	75.0	0	True	NA	NA
PB.3481.6	chr14	-	1708	5	full-splice_match	TRMT5	ENST00000261249.6	5573	5	303	3562	-4	-3562	multi-exon	FALSE	canonical	1	88258	junction_4	56556.83806800023	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	83	1612	20.0	4	True	AATAAA	-27
PB.2714.1	chr12	-	4747	8	novel_in_catalog	CTDSP2	novel	4795	8	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	1	36845	junction_2	364571.7548431142	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	750	325	1074	30.0	184	False	AATAAA	-26
PB.2714.3	chr12	-	4695	8	full-splice_match	CTDSP2	ENST00000398073.6	4795	8	15	85	15	-85	multi-exon	FALSE	canonical	1	503965	junction_7	191197.9809751651	NA	5	NA	TRUE	NA	NA	NA	C	coding	271	816	290	1105	25.0	-14	True	GATAAA	-35
PB.2714.5	chr12	-	4579	8	full-splice_match	CTDSP2	ENST00000547701.5	988	8	-61	-3530	-61	-4	multi-exon	FALSE	canonical	1	1315	junction_7	330928.6500206499	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	549	908	30.0	1348	False	AATAAA	-24
PB.2714.4	chr12	-	4624	8	novel_in_catalog	CTDSP2	novel	4795	8	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	1	116000	junction_5	306238.56005568535	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	120	953	30.0	389	False	AATAAA	-24
PB.7313.1	chr20	-	2610	5	full-splice_match	SDC4	ENST00000372733.3	2613	5	0	3	0	-3	multi-exon	FALSE	canonical	1	714282	junction_4	254373.71813829354	NA	1	NA	TRUE	NA	NA	NA	A	coding	198	597	41	637	20.0	-1	True	AATAAA	-15
PB.8415.1	chr3	+	3726	16	full-splice_match	EPHB1	ENST00000398015.7	4672	16	261	685	-109	28	multi-exon	FALSE	canonical	1	18333	junction_1	11700.11838496612	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	110	3064	70.0	-1	True	NA	NA
PB.11607.8	chr9	-	3939	9	novel_not_in_catalog	CARNMT1	novel	4130	8	NA	NA	562	-3	any annotated donor/acceptor	FALSE	canonical	1	757	junction_8	59850.5898503724	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	203	1195	25.0	642	False	ATTAAA	-18
PB.3481.3	chr14	-	1974	5	full-splice_match	TRMT5	ENST00000261249.6	5573	5	319	3280	12	-3280	multi-exon	FALSE	canonical	1	88258	junction_4	56556.83806800023	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	67	1596	75.0	20	True	NA	NA
PB.3537.3	chr14	+	3327	16	novel_not_in_catalog	DCAF4	novel	2024	14	NA	NA	0	2393	intron_retention	FALSE	canonical	1	4773	junction_15	54871.92305092529	NA	1	NA	TRUE	NA	NA	NA	B	coding	280	843	693	1535	10.0	0	True	ATTAAA	-16
PB.3537.2	chr14	+	2339	15	novel_in_catalog	DCAF4	novel	2024	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	13117	junction_14	43554.932214904184	NA	0	NA	TRUE	NA	NA	NA	B	coding	496	1491	92	1582	30.0	-40	True	AATAAA	-12
PB.8164.1	chr3	-	4144	9	full-splice_match	WDR82	ENST00000296490.7	4293	9	128	21	128	-21	multi-exon	FALSE	canonical	1	86085	junction_6	139857.95406031614	NA	3	NA	TRUE	NA	NA	NA	C	coding	313	942	155	1096	35.0	9504	False	NA	NA
PB.3537.4	chr14	+	2380	14	novel_in_catalog	DCAF4	novel	2024	14	NA	NA	12	11	intron_retention	FALSE	canonical	1	57932	junction_9	35215.21425102455	NA	0	NA	TRUE	NA	NA	NA	B	coding	496	1491	40	1530	25.0	-6	True	AATAAA	-23
PB.6445.42	chr2	-	1895	1	novel_in_catalog	PREPL	novel	6049	14	NA	NA	2	-13298	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	2	True	NA	NA
PB.8415.2	chr3	+	4400	16	full-splice_match	EPHB1	ENST00000398015.7	4672	16	267	5	-103	-5	multi-exon	FALSE	canonical	1	18333	junction_1	11700.11838496612	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	104	3058	30.0	5	True	ATTAAA	-28
PB.6742.9	chr2	-	5595	8	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	canonical	1	10954	junction_7	297541.4066871832	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	420	1007	20.0	-19	True	AATAAA	-17
PB.5520.16	chr18	-	2646	20	novel_not_in_catalog	RTTN	novel	8088	49	NA	NA	2385	-12137	any annotated donor/acceptor	FALSE	canonical	1	362	junction_9	21752.503440604673	NA	2	NA	TRUE	NA	NA	NA	C	coding	779	2337	308	2644	65.0	-2127	False	AATAGA	-16
PB.6850.40	chr2	-	1742	5	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	2	8153	any annotated donor/acceptor	FALSE	canonical	1	6955	junction_1	2661.917072337153	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	ATTAAA	-18
PB.3849.14	chr15	-	3890	1	novel_in_catalog	MYEF2	novel	10360	17	NA	NA	-4	-11687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	88	267	207	473	75.0	-1	True	NA	NA
PB.3849.13	chr15	-	1843	9	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	0	11	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	98301.63067243277	NA	2	1	TRUE	NA	NA	NA	B	coding	207	624	565	1188	10.0	-22	True	NA	NA
PB.3849.12	chr15	-	2471	17	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	98533.4573437931	NA	2	1	TRUE	NA	NA	NA	B	coding	221	666	588	1253	20.0	30	False	ATTAAA	-17
PB.3849.11	chr15	-	2821	13	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_10	101241.39887839444	NA	3	1	TRUE	NA	NA	NA	B	coding	330	993	565	1557	20.0	-22	True	ATTAAA	-17
PB.3849.10	chr15	-	2940	15	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_12	90391.15027357829	NA	2	1	TRUE	NA	NA	NA	B	coding	371	1116	561	1676	20.0	-18	True	ATTAAA	-17
PB.1669.9	chr10	-	4211	4	novel_in_catalog	PDZD8	novel	9699	5	NA	NA	1	1669	no_combination_of_known_junctions	FALSE	canonical	1	32672	junction_3	95464.65703541225	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	240	3581	15.0	-27	True	AGTAAA	-17
PB.1669.8	chr10	-	4312	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	25	5362	25	1671	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1154	3465	216	3680	10.0	-3	True	AGTAAA	-19
PB.5520.14	chr18	-	3534	26	incomplete-splice_match	RTTN	ENST00000255674.11	6960	49	-68	117814	0	-12120	3prime_fragment	FALSE	canonical	1	43982	junction_7	11479.840762240563	NA	2	NA	TRUE	NA	NA	NA	C	coding	1155	3465	69	3533	60.0	134	False	AATAGA	-33
PB.9733.1	chr6	+	912	6	full-splice_match	TMEM14C	ENST00000229563.5	1113	6	193	8	43	2	multi-exon	FALSE	canonical	1	1197712	junction_3	432789.53146489116	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	119	457	35.0	2	True	AATAAA	-10
PB.9733.3	chr6	+	2242	5	novel_in_catalog	TMEM14C	novel	1177	6	NA	NA	41	2	intron_retention	FALSE	canonical	1	1197712	junction_2	420155.689877797	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	1449	1787	35.0	0	True	AATAAA	-10
PB.9733.2	chr6	+	3507	3	novel_in_catalog	TMEM14C	novel	1177	6	NA	NA	-12	2	intron_retention	FALSE	canonical	1	1739435	junction_1	48625.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	1646	1945	35.0	27	True	AATAAA	-10
PB.1669.1	chr10	-	4806	5	novel_not_in_catalog	PDZD8	novel	9699	5	NA	NA	19	10154	intron_retention	FALSE	canonical	1	10299	junction_1	121314.37854805175	NA	5	NA	TRUE	NA	NA	NA	C	coding	466	1401	222	1622	25.0	-9	True	AATAAA	-38
PB.1669.3	chr10	-	2975	1	incomplete-splice_match	PDZD8	ENST00000334464.6	9699	5	95030	189	33798	-189	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.1669.4	chr10	-	6502	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	-28	3225	-28	-3225	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	2	NA	TRUE	NA	NA	NA	C	coding	1154	3465	269	3733	50.0	-2	True	AATAAA	-12
PB.1669.7	chr10	-	4578	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	34	5087	34	1946	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	1	NA	TRUE	NA	NA	NA	C	coding	1154	3465	207	3671	30.0	6	True	NA	NA
PB.1669.6	chr10	-	6322	4	novel_in_catalog	PDZD8	novel	9699	5	NA	NA	27	-3227	no_combination_of_known_junctions	FALSE	canonical	1	32672	junction_3	95464.65703541225	NA	9	NA	TRUE	NA	NA	NA	C	coding	1113	3342	214	3555	55.0	-1	True	AATAAA	-10
PB.3352.4	chr14	-	2041	16	novel_in_catalog	RABGGTA	novel	735	3	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	99674	junction_15	80507.68136806712	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	158	1966	15.0	5	True	AATAAA	-27
PB.253.2	chr1	+	2041	5	full-splice_match	IQCC	ENST00000291358.10	2027	5	-20	6	-20	-1	multi-exon	FALSE	canonical	1	34480	junction_1	12380.460499815828	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	42	1442	10.0	-30	True	AATAAA	-13
PB.253.3	chr1	+	2460	4	novel_in_catalog	IQCC	novel	2027	5	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	40027	junction_1	11074.979729101087	NA	3	NA	TRUE	NA	NA	NA	C	coding	366	1101	762	1862	10.0	-20	True	AATAAA	-12
PB.1819.8	chr11	-	3646	21	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	0	-1	intron_retention	FALSE	canonical	1	25159	junction_2	2072052.5793576858	NA	2	1	TRUE	NA	NA	NA	C	coding	646	1941	941	2881	25.0	-15	True	AATAAA	-19
PB.1069.1	chr1	-	5041	11	full-splice_match	SLC41A1	ENST00000367137.3	4997	11	-45	1	-45	0	multi-exon	FALSE	canonical	1	118209	junction_10	40761.683776433965	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	1061	2602	10.0	537	False	AATAAA	-17
PB.5520.10	chr18	-	6608	47	novel_not_in_catalog	RTTN	novel	3175	15	NA	NA	13	6	any annotated donor/acceptor	FALSE	canonical	1	550	junction_2	31565.34290947017	NA	2	NA	TRUE	NA	NA	NA	C	coding	2033	6102	30	6131	60.0	-1	True	AATAAA	-14
PB.9820.4	chr6	+	2030	4	full-splice_match	ZSCAN26	ENST00000421553.6	2835	4	115	690	-18	1	multi-exon	FALSE	canonical	1	52018	junction_2	32601.82609745793	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	156	1595	30.0	-18	True	NA	NA
PB.122.7	chr1	-	2460	1	novel_in_catalog	CROCCP2	novel	1296	4	NA	NA	5661	7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	31	96	305	400	35.0	-7162	False	AATAAA	-13
PB.122.6	chr1	-	2608	12	novel_in_catalog	CROCCP2	novel	1296	4	NA	NA	-28	-4	no_combination_of_known_junctions	FALSE	canonical	1	13158	junction_11	61255.74426955018	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	1148	1483	20.0	-20	True	AATAAA	-19
PB.122.5	chr1	-	2778	14	novel_in_catalog	CROCCP2	novel	1296	4	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	39142	junction_11	48984.98405217375	NA	4	1	TRUE	NA	NA	NA	C	coding	111	336	1331	1666	20.0	-1	True	AATAAA	-20
PB.122.4	chr1	-	2387	11	novel_in_catalog	CROCCP2	novel	1296	4	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	13158	junction_10	58615.394639633705	NA	3	NA	TRUE	NA	NA	NA	C	coding	111	336	1119	1454	20.0	9	True	AATAAA	-21
PB.122.3	chr1	-	2597	12	novel_in_catalog	CROCCP2	novel	1296	4	NA	NA	-29	-2	no_combination_of_known_junctions	FALSE	canonical	1	13158	junction_11	55776.310203354486	NA	3	NA	TRUE	NA	NA	NA	C	coding	111	336	1149	1484	20.0	-21	True	AATAAA	-21
PB.122.2	chr1	-	2601	13	full-splice_match	CROCCP2	ENST00000639456.1	2575	13	-11	-15	-11	-2	multi-exon	FALSE	canonical	1	27448	junction_1	51122.20279117697	NA	3	NA	TRUE	NA	NA	NA	C	coding	111	336	1333	1668	20.0	-3	True	AATAAA	-21
PB.122.1	chr1	-	2710	13	novel_in_catalog	CROCCP2	novel	1296	4	NA	NA	-20	-1	no_combination_of_known_junctions	TRUE	canonical	1	18480	junction_11	53795.92393552126	NA	4	NA	TRUE	NA	NA	NA	C	coding	111	336	1258	1593	10.0	-12	True	AATAAA	-25
PB.7106.10	chr2	-	2991	7	novel_in_catalog	MTERF4	novel	3993	5	NA	NA	-3	-3	no_combination_of_known_junctions	FALSE	canonical	1	12148	junction_3	81960.96782005444	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	30	1175	25.0	-16	True	GATAAA	-25
PB.1819.5	chr11	-	3789	22	full-splice_match	EIF4G2	ENST00000339995.9	3978	22	187	2	0	-2	multi-exon	FALSE	canonical	1	3229390	junction_21	1119405.3991834996	NA	14	NA	TRUE	NA	NA	NA	C	coding	701	2106	924	3029	15.0	2	True	AATAAA	-14
PB.11739.4	chr9	-	3127	12	full-splice_match	ALAD	ENST00000409155.7	3173	12	50	-4	1	4	multi-exon	FALSE	canonical	1	267115	junction_7	50737.64703398704	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	121	1140	20.0	0	True	NA	NA
PB.8831.3	chr4	+	1712	12	novel_not_in_catalog	ART3	novel	502	4	NA	NA	-20653	-6	any annotated donor/acceptor	FALSE	canonical	1	2127	junction_1	20824.353884195658	NA	1	NA	TRUE	NA	NA	NA	B	coding	367	1104	343	1446	35.0	-5959	False	AATAAA	-14
PB.6847.3	chr2	-	1567	9	novel_in_catalog	CIR1	novel	1921	10	NA	NA	-1	-344	no_combination_of_known_junctions	FALSE	canonical	1	165	junction_6	124632.3996664165	NA	1	1	TRUE	NA	NA	NA	B	coding	339	1020	417	1436	25.0	-37	True	AATAAA	-14
PB.4593.2	chr16	-	2879	7	novel_in_catalog	MTHFSD	novel	3013	8	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	1	5753	junction_5	55276.14788621661	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	12	1049	15.0	39	True	AATAAA	-20
PB.4593.3	chr16	-	3003	8	full-splice_match	MTHFSD	ENST00000543303.6	1207	8	-8	-1788	-1	-6	multi-exon	FALSE	canonical	1	24422	junction_7	44708.503443108544	NA	5	NA	TRUE	NA	NA	NA	C	coding	382	1149	28	1176	20.0	23	True	AATAAA	-17
PB.4593.1	chr16	-	7340	7	novel_in_catalog	MTHFSD	novel	3013	8	NA	NA	8	-1	intron_retention	FALSE	canonical	1	23325	junction_6	48405.51865490132	NA	13	NA	TRUE	NA	NA	NA	C	coding	258	777	4732	5508	15.0	39	True	AATAAA	-22
PB.118.8	chr1	-	2610	12	novel_not_in_catalog	FBXO42	novel	6202	10	NA	NA	-23	419	any annotated donor/acceptor	FALSE	canonical	1	846	junction_10	91655.5238139159	NA	3	NA	TRUE	NA	NA	NA	C	coding	717	2154	450	2603	15.0	-5	True	AAAACA	-41
PB.11769.3	chr9	-	4226	5	novel_not_in_catalog	RBM18	novel	4974	6	NA	NA	-5401	-581	any annotated donor/acceptor	FALSE	canonical	1	41	junction_4	141577.52448459997	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.4593.4	chr16	-	6689	7	novel_in_catalog	MTHFSD	novel	3013	8	NA	NA	-1	-10	intron_retention	FALSE	canonical	1	24422	junction_6	48170.018831449735	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	4745	5521	20.0	23	True	AATAAA	-20
PB.4593.5	chr16	-	2321	8	full-splice_match	MTHFSD	ENST00000634347.1	1207	8	-20	-1094	12	-45	multi-exon	FALSE	canonical	1	24422	junction_7	44611.410060107046	NA	3	1	TRUE	NA	NA	NA	C	coding	382	1149	40	1188	45.0	11	True	ATTAAA	-18
PB.3454.1	chr14	-	3374	19	full-splice_match	DLGAP5	ENST00000247191.6	2973	19	88	-489	18	465	multi-exon	FALSE	canonical	1	330348	junction_1	61511.101043698	NA	0	NA	TRUE	NA	NA	NA	C	coding	846	2541	130	2670	55.0	-6	True	AATAAA	-10
PB.118.5	chr1	-	2450	10	novel_in_catalog	FBXO42	novel	6202	10	NA	NA	-35	427	no_combination_of_known_junctions	FALSE	canonical	1	3089	junction_3	75685.15131014475	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	1230	2435	0.0	-17	True	NA	NA
PB.3454.3	chr14	-	3040	20	novel_in_catalog	DLGAP5	novel	2954	20	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	1	9180	junction_19	140878.6351110932	NA	0	NA	TRUE	NA	NA	NA	C	coding	846	2541	267	2807	50.0	-9	False	AATAAA	-30
PB.3454.2	chr14	-	3097	21	novel_in_catalog	DLGAP5	novel	2954	20	NA	NA	23	-6	combination_of_known_junctions	FALSE	canonical	1	9180	junction_20	159091.3435361192	NA	1	1	TRUE	NA	NA	NA	C	coding	842	2529	233	2761	50.0	-1	True	AATAAA	-30
PB.3454.4	chr14	-	2907	19	novel_not_in_catalog	DLGAP5	novel	2954	20	NA	NA	-7	-6	any annotated donor/acceptor	FALSE	canonical	1	8411	junction_5	113939.3027929404	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	155	2674	50.0	-5	True	AATAAA	-30
PB.3454.7	chr14	-	5218	18	novel_in_catalog	DLGAP5	novel	2954	20	NA	NA	18	8	intron_retention	FALSE	canonical	1	337932	junction_10	58554.297544715	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	130	2565	35.0	-6	True	AATAAA	-20
PB.3454.6	chr14	-	2892	19	full-splice_match	DLGAP5	ENST00000247191.6	2973	19	86	-5	16	5	multi-exon	FALSE	canonical	1	330348	junction_1	61511.101043698	NA	3	NA	TRUE	NA	NA	NA	C	coding	846	2541	132	2672	25.0	-8	True	AATAAA	-17
PB.7639.4	chr22	-	2796	8	full-splice_match	PPM1F	ENST00000263212.9	5143	8	-13	2360	-13	1345	multi-exon	FALSE	canonical	1	211730	junction_1	50651.867518807805	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	120	1484	35.0	-3	True	NA	NA
PB.197.4	chr1	+	2584	3	novel_in_catalog	HMGN2	novel	320	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	3908	junction_2	53784.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	1389	1799	15.0	-728	False	AATAAA	-22
PB.750.8	chr1	-	4446	18	novel_in_catalog	POGZ	novel	6152	17	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	1	8605	junction_7	124433.84369414243	NA	1	NA	TRUE	NA	NA	NA	C	coding	1361	4086	55	4140	80.0	-1	True	TTTAAA	-35
PB.8831.2	chr4	+	3410	12	novel_not_in_catalog	ART3	novel	502	4	NA	NA	-20653	1	intron_retention	FALSE	canonical	1	816	junction_1	23733.438763423852	NA	4	NA	TRUE	NA	NA	NA	B	coding	338	1017	821	1837	35.0	-5959	False	AATAAA	-21
PB.979.6	chr1	+	4258	28	full-splice_match	DHX9	ENST00000367549.3	4240	28	-21	3	-21	1	multi-exon	FALSE	canonical	1	212284	junction_25	280979.51201768825	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	132	3944	15.0	1	True	AATAAA	-13
PB.9931.5	chr6	-	2068	6	novel_not_in_catalog	BAK1	novel	2212	7	NA	NA	4	-2	intron_retention	FALSE	canonical	1	12811	junction_4	16794.151189030064	NA	3	NA	TRUE	NA	NA	NA	C	coding	152	459	361	819	15.0	20	True	AATAAA	-15
PB.9931.4	chr6	-	2281	7	novel_not_in_catalog	BAK1	novel	2212	7	NA	NA	16	-1	intron_retention	TRUE	canonical	1	5139	junction_6	18763.61141500573	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	396	1031	20.0	-19	True	AATAAA	-16
PB.2278.1	chr11	+	5357	20	full-splice_match	DIXDC1	ENST00000440460.6	5897	20	-65	605	-65	0	multi-exon	FALSE	canonical	1	47565	junction_1	30276.603578403032	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	363	2414	90.0	-265	False	NA	NA
PB.9931.6	chr6	-	2264	5	novel_in_catalog	BAK1	novel	2212	7	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	19231	junction_4	14206.352355548555	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	256	891	15.0	10	True	AATAAA	-13
PB.4269.2	chr16	+	2170	6	full-splice_match	C16orf45	ENST00000300006.8	2404	6	214	20	-27	-20	multi-exon	FALSE	canonical	1	303830	junction_1	65752.44849159611	NA	5	NA	TRUE	NA	NA	NA	C	coding	204	615	146	760	45.0	2	True	NA	NA
PB.7675.13	chr22	-	1978	6	novel_in_catalog	PITPNB	novel	2926	12	NA	NA	5	553	intron_retention	FALSE	canonical	1	1591	junction_2	272309.31697508995	NA	3	NA	TRUE	NA	NA	NA	B	coding	119	360	73	432	100.0	-8	True	NA	NA
PB.7675.10	chr22	-	2691	11	novel_not_in_catalog	PITPNB	novel	2926	12	NA	NA	0	-218	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	207055.5760851661	NA	2	1	TRUE	NA	NA	NA	B	coding	270	813	65	877	20.0	0	True	AATAAA	-30
PB.4269.1	chr16	+	1995	6	full-splice_match	C16orf45	ENST00000300006.8	2404	6	210	199	30	-14	multi-exon	FALSE	canonical	1	303830	junction_1	65752.44849159611	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	150	764	75.0	-2	True	NA	NA
PB.7675.14	chr22	-	2632	5	novel_in_catalog	PITPNB	novel	2926	12	NA	NA	0	552	intron_retention	FALSE	canonical	1	588046	junction_1	71671.64635509638	NA	0	NA	TRUE	NA	NA	NA	B	coding	135	408	65	472	95.0	0	True	NA	NA
PB.7675.15	chr22	-	3918	1	novel_in_catalog	PITPNB	novel	2926	12	NA	NA	0	-4890	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	0	True	AATACA	-28
PB.11180.8	chr8	+	4255	5	novel_in_catalog	MSC-AS1	novel	485	4	NA	NA	166	8	intron_retention	FALSE	canonical	1	3274	junction_3	27389.893523889426	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	3	True	AATAAA	-19
PB.5720.11	chr19	-	5305	13	novel_in_catalog	KANK2	novel	5162	13	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	18230	junction_12	160096.4852307603	NA	15	NA	TRUE	NA	NA	NA	C	coding	851	2556	465	3020	10.0	-10	True	AATAAA	-15
PB.5720.10	chr19	-	5263	13	novel_in_catalog	KANK2	novel	5162	13	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	1	142480	junction_8	131374.6399417838	NA	3	NA	TRUE	NA	NA	NA	C	coding	851	2556	422	2977	10.0	-28	True	AATAAA	-16
PB.5720.13	chr19	-	3913	13	novel_in_catalog	KANK2	novel	5162	13	NA	NA	1	719	combination_of_known_junctions	FALSE	canonical	1	142480	junction_8	131374.6399417838	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	390	2945	75.0	4	True	NA	NA
PB.5720.12	chr19	-	3662	12	novel_in_catalog	KANK2	novel	5162	13	NA	NA	7	722	no_combination_of_known_junctions	FALSE	canonical	1	45948	junction_11	159220.70237210917	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	136	2691	75.0	-7	True	NA	NA
PB.11509.5	chr9	+	1962	7	full-splice_match	UBAP1	ENST00000297661.8	2735	7	26	747	1	-74	multi-exon	FALSE	canonical	1	342055	junction_1	111316.6446309306	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	210	1718	20.0	-8	True	ATTAAA	-14
PB.5631.2	chr19	+	2958	2	antisense	novelGene_AC005523.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	669	2010	111	2120	35.0	11	True	ATTAAA	-10
PB.5631.3	chr19	+	2459	1	full-splice_match	FEM1A	ENST00000269856.4	9593	1	1412	5722	1412	-5722	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	251	756	17	772	35.0	-2302	False	ATTAAA	-10
PB.5631.1	chr19	+	3121	1	full-splice_match	FEM1A	ENST00000269856.4	9593	1	750	5722	750	-5722	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	461	1386	49	1434	35.0	-2964	False	ATTAAA	-10
PB.10964.4	chr8	+	2118	4	full-splice_match	CLN8	ENST00000635970.1	1958	4	-26	-134	-11	134	multi-exon	FALSE	canonical	1	469	junction_3	45454.731696002294	NA	1	1	TRUE	NA	NA	NA	C	coding	286	861	221	1081	30.0	0	True	GATAAA	-29
PB.10964.5	chr8	+	2033	4	novel_not_in_catalog	CLN8	novel	835	2	NA	NA	-9	65	any annotated donor/acceptor	FALSE	canonical	1	81	junction_3	45637.63656116395	NA	1	1	TRUE	NA	NA	NA	C	coding	286	861	219	1079	20.0	2	True	AATAAA	-19
PB.5905.4	chr19	+	2796	4	novel_not_in_catalog	NUDT19	novel	2967	3	NA	NA	426	-7	any annotated donor/acceptor	FALSE	canonical	1	3541	junction_1	62309.77721745512	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	542	964	50.0	-3	True	AATAAA	-17
PB.10964.3	chr8	+	1308	3	full-splice_match	CLN8	ENST00000331222.5	7169	3	58	5803	2	1	multi-exon	FALSE	canonical	1	96838	junction_2	55.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	248	1108	15.0	4	True	AAGAAA	-20
PB.7037.18	chr2	+	2336	16	incomplete-splice_match	ACSL3	ENST00000357430.7	5679	17	80	10072	-12	844	3prime_fragment	FALSE	canonical	1	231016	junction_3	274774.1594250328	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1851	485	2335	55.0	-22	True	NA	NA
PB.7037.19	chr2	+	2229	15	incomplete-splice_match	ACSL3	ENST00000392066.7	3147	16	72	7655	-12	844	3prime_fragment	FALSE	canonical	1	314472	junction_2	230856.4770785131	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1851	378	2228	55.0	-22	True	NA	NA
PB.7037.16	chr2	+	5484	16	full-splice_match	ACSL3	ENST00000392066.7	3147	16	72	-2409	-12	-8	multi-exon	FALSE	canonical	1	314472	junction_2	230567.5178005976	NA	4	NA	TRUE	NA	NA	NA	C	coding	709	2130	378	2507	45.0	-22	True	AATAAA	-25
PB.7350.2	chr20	+	2418	6	novel_not_in_catalog	RNF114	novel	624	5	NA	NA	4	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	528164.8574225286	NA	12	2	TRUE	NA	NA	NA	C	coding	111	336	341	676	25.0	-18	True	AATAAA	-17
PB.7037.14	chr2	+	2818	18	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-12	-4	any annotated donor/acceptor	FALSE	canonical	1	2934	junction_2	352918.27274755016	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	523	2652	15.0	-22	True	AGTAAA	-13
PB.7037.15	chr2	+	2756	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-12	-4	any annotated donor/acceptor	FALSE	canonical	1	16744	junction_5	332624.6354749917	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	485	2590	15.0	-22	True	AGTAAA	-13
PB.7037.12	chr2	+	3065	16	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	-12	14	any annotated donor/acceptor	FALSE	canonical	1	16744	junction_4	306983.3988755454	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	378	2483	25.0	-22	True	AATAAA	-40
PB.7037.13	chr2	+	3067	16	full-splice_match	ACSL3	ENST00000392066.7	3147	16	94	-14	10	14	multi-exon	FALSE	canonical	1	314472	junction_2	230567.5178005976	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	356	2485	25.0	0	True	AATAAA	-40
PB.7037.10	chr2	+	3122	16	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	-12	15	no_combination_of_known_junctions	FALSE	canonical	1	2569	junction_12	339241.4886632955	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	485	2539	20.0	-22	True	AATAAA	-41
PB.7037.11	chr2	+	3008	15	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	8	12	combination_of_known_junctions	FALSE	canonical	1	22181	junction_1	281269.3793909305	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	299	2428	25.0	-2	True	AATAAA	-38
PB.3262.1	chr13	+	2355	2	antisense	novelGene_ANKRD10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.3262.2	chr13	+	1958	1	antisense	novelGene_ANKRD10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2920.10	chr12	+	3729	17	novel_not_in_catalog	OAS3	novel	6719	16	NA	NA	-34	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	78535.91099416619	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	20	3283	15.0	0	True	NA	NA
PB.2972.4	chr12	+	3056	10	novel_in_catalog	TMEM120B	novel	2766	13	NA	NA	2	-2	intron_retention	FALSE	canonical	1	16113	junction_6	55007.69130666082	NA	5	NA	TRUE	NA	NA	NA	C	coding	247	744	100	843	15.0	45	True	NA	NA
PB.2972.3	chr12	+	2865	15	novel_not_in_catalog	TMEM120B	novel	2766	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	4539	junction_12	64865.27562213633	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	106	1125	25.0	39	True	NA	NA
PB.2972.2	chr12	+	1694	12	full-splice_match	TMEM120B	ENST00000449592.6	7461	12	-42	5809	1	95	multi-exon	FALSE	canonical	1	95120	junction_1	31405.680444759466	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	144	1163	5.0	1	True	NA	NA
PB.2972.1	chr12	+	3231	12	full-splice_match	TMEM120B	ENST00000449592.6	7461	12	-43	4273	0	0	multi-exon	FALSE	canonical	1	95120	junction_1	31405.680444759466	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	145	1164	10.0	0	True	NA	NA
PB.1400.8	chr10	+	3093	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	1	45368	junction_1	90174.47523963229	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	397	1551	35.0	-11	True	AGTAAA	-27
PB.1400.9	chr10	+	2961	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-11	-10	no_combination_of_known_junctions	FALSE	canonical	1	14282	junction_1	96993.5975983796	NA	1	NA	TRUE	NA	NA	NA	B	coding	384	1155	272	1426	25.0	-11	True	AGTAAA	-20
PB.10429.4	chr7	-	2264	6	novel_not_in_catalog	STEAP1B	novel	1193	5	NA	NA	-6	8585	any annotated donor/acceptor	FALSE	canonical	1	2598	junction_5	19379.01136797231	NA	0	NA	TRUE	NA	NA	NA	B	coding	223	672	357	1028	10.0	-24	False	NA	NA
PB.10557.7	chr7	+	1738	6	full-splice_match	SUMF2	ENST00000395435.6	1287	6	31	-482	1	0	multi-exon	FALSE	canonical	1	12404	junction_3	514284.9297226587	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	28	681	20.0	-23	True	NA	NA
PB.10429.2	chr7	-	2297	19	novel_not_in_catalog	RAPGEF5	novel	6159	16	NA	NA	-143042	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	30690.854615015203	NA	31	2	TRUE	NA	NA	NA	B	coding	605	1818	224	2041	55.0	1	True	NA	NA
PB.10429.3	chr7	-	2173	5	novel_not_in_catalog	STEAP1B	novel	1193	5	NA	NA	-30	8589	any annotated donor/acceptor	FALSE	canonical	1	13224	junction_1	15101.213924714793	NA	5	NA	TRUE	NA	NA	NA	B	coding	259	780	154	933	5.0	-48	False	NA	NA
PB.10429.1	chr7	-	2407	20	novel_not_in_catalog	RAPGEF5	novel	6159	16	NA	NA	-143044	1	any annotated donor/acceptor	FALSE	canonical	1	856	junction_15	31828.87885234461	NA	0	NA	TRUE	NA	NA	NA	B	coding	727	2181	226	2406	55.0	-1	True	NA	NA
PB.1400.1	chr10	+	2240	12	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-4	-133	combination_of_known_junctions	FALSE	canonical	1	37505	junction_1	81234.5514978562	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	237	1391	75.0	-71	False	NA	NA
PB.1400.2	chr10	+	2930	12	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	37505	junction_1	81234.5514978562	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	236	1390	30.0	-70	False	AGTAAA	-25
PB.1400.3	chr10	+	2638	14	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	29580	junction_2	102286.42637551941	NA	1	1	TRUE	NA	NA	NA	B	coding	384	1155	496	1650	20.0	0	True	AATAAA	-23
PB.1400.4	chr10	+	2472	14	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	11	-133	combination_of_known_junctions	FALSE	canonical	1	29580	junction_2	102286.42637551941	NA	2	1	TRUE	NA	NA	NA	B	coding	384	1155	469	1623	75.0	-14	True	NA	NA
PB.1400.5	chr10	+	2417	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	11	6	no_combination_of_known_junctions	FALSE	canonical	1	14282	junction_1	96993.5975983796	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	275	1429	20.0	-14	True	AATAAA	-23
PB.1400.6	chr10	+	5876	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	12	-9	no_combination_of_known_junctions	FALSE	canonical	1	14282	junction_1	104933.92966459498	NA	0	NA	TRUE	NA	NA	NA	B	coding	427	1284	274	1557	55.0	-13	True	AATAAA	-19
PB.1400.7	chr10	+	5968	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	0	-34	combination_of_known_junctions	FALSE	canonical	1	45368	junction_1	90174.47523963229	NA	1	NA	TRUE	NA	NA	NA	B	coding	384	1155	386	1540	75.0	0	True	NA	NA
PB.829.1	chr1	-	2894	4	full-splice_match	NES	ENST00000368223.3	5558	4	-10	2674	-10	-2674	multi-exon	FALSE	canonical	1	267524	junction_3	141668.8309764086	NA	1	NA	TRUE	NA	NA	NA	C	coding	917	2751	144	2894	40.0	-1	True	NA	NA
PB.11797.3	chr9	+	3945	23	novel_not_in_catalog	GARNL3	novel	905	11	NA	NA	-9	-1747	any annotated donor/acceptor	FALSE	canonical	1	2249	junction_1	17858.841731527147	NA	0	NA	TRUE	NA	NA	NA	B	coding	322	969	527	1495	75.0	NA	False	NA	NA
PB.829.3	chr1	-	1913	4	full-splice_match	NES	ENST00000368223.3	5558	4	-12	3657	-12	-3657	multi-exon	FALSE	canonical	1	267524	junction_3	141668.8309764086	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1767	146	1912	65.0	-3	True	AAAAAG	-6
PB.829.2	chr1	-	2699	4	full-splice_match	NES	ENST00000368223.3	5558	4	-8	2867	-8	-2867	multi-exon	FALSE	canonical	1	267524	junction_3	141668.8309764086	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	142	2697	50.0	1	True	NA	NA
PB.8685.2	chr4	+	1571	2	full-splice_match	MRFAP1	ENST00000382581.4	1584	2	-7	20	-2	-4	multi-exon	FALSE	canonical	1	3102833	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	180	563	65.0	-1	True	AATAAA	-17
PB.465.3	chr1	-	6238	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-15	-4602	-1	-455	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	4	NA	TRUE	NA	NA	NA	C	coding	402	1209	88	1296	20.0	30	False	TATAAA	-21
PB.12088.3	chrX	+	2485	4	novel_not_in_catalog	FAM156B	novel	858	4	NA	NA	30	0	any annotated donor/acceptor	FALSE	canonical	1	107	junction_1	1442.7532321533329	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	1155	1796	40.0	NA	False	AATAAA	-16
PB.12088.2	chrX	+	3046	4	full-splice_match	FAM156B	ENST00000593751.7	2942	4	-103	-1	-9	1	multi-exon	FALSE	canonical	1	202	junction_1	1398.627184063001	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	1715	2356	35.0	NA	False	AATAAA	-17
PB.7949.1	chr3	-	1421	3	full-splice_match	CHCHD4	ENST00000396914.3	1405	3	-1	-15	-1	-1	multi-exon	FALSE	canonical	1	60969	junction_2	50006.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	142	429	184	612	15.0	-1	True	ATTAAA	-22
PB.7782.3	chr22	+	3557	12	full-splice_match	GTPBP1	ENST00000216044.9	5126	12	221	1348	-5	0	multi-exon	FALSE	canonical	1	247325	junction_1	98652.43873542246	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	40	2022	10.0	0	True	AATAAA	-17
PB.2154.16	chr11	-	3022	8	novel_not_in_catalog	RAB6A	novel	3389	8	NA	NA	5	-62	intron_retention	FALSE	canonical	0	0	junction_5	178215.5600186906	NA	10	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-13	True	AATATA	-14
PB.2154.15	chr11	-	2983	7	novel_in_catalog	RAB6A	novel	3389	8	NA	NA	7	-1	intron_retention	FALSE	canonical	1	1474	junction_2	191033.243586613	NA	25	2	TRUE	NA	NA	NA	C	coding	138	417	450	866	20.0	-11	True	AATAAA	-15
PB.7782.7	chr22	+	2962	3	novel_not_in_catalog	GTPBP1	novel	5126	12	NA	NA	-981	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	179788.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	2479	2802	25.0	NA	False	AATAAA	-18
PB.2154.12	chr11	-	3215	9	novel_not_in_catalog	RAB6A	novel	3389	8	NA	NA	-5	1	intron_retention	FALSE	canonical	1	5543	junction_3	181860.22794026288	NA	4	NA	TRUE	NA	NA	NA	C	coding	179	540	490	1029	25.0	-51	True	AATAAA	-17
PB.2154.11	chr11	-	3247	9	novel_not_in_catalog	RAB6A	novel	3389	8	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_8	189872.71421891922	NA	2	NA	TRUE	NA	NA	NA	C	coding	175	528	717	1244	25.0	-60	True	AATAAA	-17
PB.7782.4	chr22	+	2325	12	full-splice_match	GTPBP1	ENST00000216044.9	5126	12	221	2580	-5	-1232	multi-exon	FALSE	canonical	1	247325	junction_1	98652.43873542246	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	40	2022	5.0	0	True	NA	NA
PB.4990.11	chr17	-	3277	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	149719	junction_2	295948.69548311713	NA	1	NA	TRUE	NA	NA	NA	C	coding	722	2169	142	2310	100.0	23	True	NA	NA
PB.2449.1	chr12	+	3228	11	novel_not_in_catalog	FOXJ2	novel	5523	11	NA	NA	-22	1357	any annotated donor/acceptor	FALSE	canonical	1	1782	junction_10	50541.90973449658	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	1168	2883	15.0	-6414	False	AATAAA	-20
PB.2449.2	chr12	+	3794	11	full-splice_match	FOXJ2	ENST00000162391.7	5523	11	-14	1743	-14	747	multi-exon	FALSE	canonical	1	102352	junction_1	27061.627922207488	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	1160	2884	20.0	-6406	False	TTTAAA	-18
PB.2449.3	chr12	+	5517	11	full-splice_match	FOXJ2	ENST00000162391.7	5523	11	-12	18	-12	-18	multi-exon	FALSE	canonical	1	102352	junction_1	27061.627922207488	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	1158	2882	80.0	-6404	False	NA	NA
PB.2154.18	chr11	-	2702	8	full-splice_match	RAB6A	ENST00000310653.10	3389	8	3	684	3	-426	multi-exon	FALSE	canonical	1	124634	junction_4	147084.1725891841	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	500	1126	35.0	-61	True	AATAAA	-9
PB.7401.1	chr20	-	2406	2	novel_not_in_catalog	SLCO4A1-AS1	novel	649	2	NA	NA	-24	-466	any annotated donor/acceptor	FALSE	canonical	1	1536	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	181	546	745	1290	20.0	-4	True	AATAAA	-26
PB.1714.1	chr10	-	3247	11	novel_not_in_catalog	EBF3	novel	4375	16	NA	NA	12065	549	any annotated donor/acceptor	FALSE	canonical	1	286	junction_10	14384.56901822227	NA	2	NA	TRUE	NA	NA	NA	A	coding	390	1173	397	1569	30.0	NA	False	AATAAA	-41
PB.10557.8	chr7	+	1946	8	full-splice_match	SUMF2	ENST00000395436.6	1683	8	284	-547	2	1	multi-exon	FALSE	canonical	1	75022	junction_3	416023.9017490339	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	27	887	15.0	-22	True	NA	NA
PB.8606.2	chr3	+	2649	1	full-splice_match	FAM43A	ENST00000329759.5	2494	1	-664	509	-664	-509	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	423	1272	948	2219	75.0	-3	True	NA	NA
PB.10557.9	chr7	+	1988	9	full-splice_match	SUMF2	ENST00000434526.6	2052	9	63	1	-2	0	multi-exon	FALSE	canonical	1	1003112	junction_3	139764.32241450023	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	26	931	20.0	-21	True	NA	NA
PB.5275.1	chr17	+	1479	5	novel_not_in_catalog	METTL23	novel	617	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	246194.41010611918	NA	1	NA	TRUE	NA	NA	NA	A	coding	214	645	642	1286	15.0	0	True	ATTAAA	-16
PB.835.1	chr1	-	1975	5	full-splice_match	ETV3L	ENST00000454449.2	1976	5	1	0	1	0	multi-exon	FALSE	canonical	1	1928	junction_1	580.8835403934252	NA	3	NA	TRUE	NA	NA	NA	A	coding	361	1086	285	1370	10.0	0	True	AATAAA	-18
PB.75.1	chr1	+	1504	7	full-splice_match	SLC25A33	ENST00000302692.6	3854	7	-57	2407	-57	-2407	multi-exon	FALSE	canonical	1	131	junction_2	14072.855519482257	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	268	1233	10.0	-64	False	ATTAAA	-23
PB.8487.1	chr3	-	3292	3	full-splice_match	LINC00886	ENST00000472943.5	3306	3	21	-7	21	7	multi-exon	FALSE	canonical	1	9292	junction_2	3237.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.4992.10	chr17	+	2932	11	incomplete-splice_match	ATP6V0A1	ENST00000264649.10	4110	21	31606	4	-51	0	5prime_fragment	FALSE	canonical	1	328867	junction_4	68213.80441816743	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	41	1474	20.0	3	True	AATAAA	-20
PB.4943.5	chr17	+	3607	7	full-splice_match	LASP1	ENST00000318008.10	4109	7	199	303	-3	-294	multi-exon	FALSE	canonical	1	997146	junction_6	274562.89958870184	NA	8	NA	TRUE	NA	NA	NA	C	coding	261	786	133	918	60.0	0	True	NA	NA
PB.9511.1	chr5	+	2890	1	full-splice_match	PCDHB8	ENST00000239444.3	2740	1	7	-157	7	157	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	801	2406	239	2644	30.0	-9364	False	AGTAAA	-26
PB.11108.11	chr8	+	3354	8	novel_in_catalog	AP3M2	novel	3669	10	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2669	junction_3	71565.85419780319	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	115	1233	15.0	1	True	AATAAA	-17
PB.4474.3	chr16	-	6436	12	novel_in_catalog	DYNC1LI2	novel	4515	13	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	465148	junction_2	114673.70178369955	NA	41	1	TRUE	NA	NA	NA	C	coding	310	933	16	948	10.0	-4	True	AATAAA	-21
PB.9606.4	chr5	-	1790	4	novel_in_catalog	NUDCD2	novel	8005	4	NA	NA	30	345	combination_of_known_junctions	FALSE	canonical	1	42971	junction_3	358988.97154307616	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	1078	1401	15.0	-9	True	AATAAA	-15
PB.9606.1	chr5	-	3663	4	full-splice_match	NUDCD2	ENST00000302764.8	8005	4	31	4311	31	3086	multi-exon	FALSE	canonical	1	638813	junction_3	82387.52378984468	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	60	533	20.0	-8	True	NA	NA
PB.9606.2	chr5	-	2388	4	full-splice_match	NUDCD2	ENST00000302764.8	8005	4	-6	5623	-6	1774	multi-exon	FALSE	canonical	1	638813	junction_3	82387.52378984468	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	97	570	10.0	-45	True	NA	NA
PB.9606.3	chr5	-	968	4	full-splice_match	NUDCD2	ENST00000302764.8	8005	4	-15	7052	-15	345	multi-exon	FALSE	canonical	1	638813	junction_3	82387.52378984468	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	106	579	15.0	-54	True	AATAAA	-15
PB.4474.1	chr16	-	4344	13	full-splice_match	DYNC1LI2	ENST00000258198.6	4515	13	167	4	-30	-4	multi-exon	FALSE	canonical	1	465148	junction_2	115671.98883297713	NA	12	NA	TRUE	NA	NA	NA	C	coding	492	1479	41	1519	15.0	196	False	AATAAA	-19
PB.7260.4	chr20	+	2358	16	novel_in_catalog	CEP250	novel	868	7	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	9928	junction_1	29391.295551952495	NA	0	NA	TRUE	NA	NA	NA	B	coding	685	2055	303	2357	60.0	-8	True	GGGGCT	-29
PB.4411.11	chr16	+	3883	30	novel_in_catalog	PHKB	novel	1032	8	NA	NA	0	252	no_combination_of_known_junctions	FALSE	canonical	1	2859	junction_24	127464.33011552776	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	141	2423	25.0	-4	True	AATAAA	-14
PB.4411.10	chr16	+	4051	32	full-splice_match	PHKB	ENST00000566044.5	3829	32	32	-254	0	254	multi-exon	FALSE	canonical	1	44778	junction_1	112431.01110937304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	158	3418	15.0	-4	True	AATAAA	-16
PB.4411.13	chr16	+	4029	32	novel_in_catalog	PHKB	novel	1032	8	NA	NA	1	252	combination_of_known_junctions	FALSE	canonical	1	138530	junction_1	104399.74572319434	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	138	3398	25.0	-1	True	AATAAA	-14
PB.4411.12	chr16	+	3953	31	novel_in_catalog	PHKB	novel	1032	8	NA	NA	1	252	no_combination_of_known_junctions	FALSE	canonical	1	3754	junction_12	125699.39238377407	NA	0	NA	TRUE	NA	NA	NA	C	coding	1060	3183	140	3322	25.0	-3	True	AATAAA	-14
PB.4411.15	chr16	+	4396	31	full-splice_match	PHKB	ENST00000299167.12	5464	31	5	1063	0	112	multi-exon	FALSE	canonical	1	70168	junction_1	107532.23873292864	NA	1	NA	TRUE	NA	NA	NA	C	coding	1093	3282	21	3302	40.0	0	True	ATTAAA	-16
PB.4411.14	chr16	+	4380	32	novel_in_catalog	PHKB	novel	1032	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	138530	junction_1	104399.74572319434	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	137	3397	95.0	0	True	NA	NA
PB.4411.17	chr16	+	2087	9	novel_not_in_catalog	PHKB	novel	1032	8	NA	NA	1	782	any annotated donor/acceptor	FALSE	canonical	1	10308	junction_8	132469.5150192583	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	136	1164	70.0	1	True	NA	NA
PB.4411.16	chr16	+	3569	28	novel_in_catalog	PHKB	novel	1032	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4498	junction_27	95868.7547954217	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	137	2827	25.0	0	True	ATTAAA	-18
PB.1615.1	chr10	+	5328	14	full-splice_match	PPRC1	ENST00000278070.6	5330	14	7	-5	7	-1	multi-exon	FALSE	canonical	1	144817	junction_1	155220.14662724116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1664	4995	33	5027	10.0	-3	True	AATAAA	-21
PB.1615.2	chr10	+	5142	14	full-splice_match	PPRC1	ENST00000278070.6	5330	14	10	178	10	-33	multi-exon	FALSE	canonical	1	144817	junction_1	155220.14662724116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1664	4995	30	5024	75.0	0	True	TATAAA	-8
PB.1615.3	chr10	+	5120	13	novel_in_catalog	PPRC1	novel	4580	12	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	11390	junction_5	178765.75737633125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1646	4941	30	4970	30.0	0	True	AATAAA	-17
PB.7260.3	chr20	+	8055	35	novel_in_catalog	CEP250	novel	868	7	NA	NA	-3	333	combination_of_known_junctions	FALSE	canonical	1	23633	junction_1	65847.68059852235	NA	1	1	TRUE	NA	NA	NA	B	coding	2442	7329	380	7708	10.0	-14	True	AATAAA	-20
PB.541.1	chr1	+	3288	15	full-splice_match	MTF2	ENST00000370298.8	4125	15	3	834	3	-832	multi-exon	FALSE	canonical	1	244090	junction_10	51950.578808623686	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	287	2068	10.0	0	True	AAAAAG	-20
PB.3193.1	chr13	+	2875	4	full-splice_match	KLF5	ENST00000377687.5	3566	4	681	10	681	-9	multi-exon	FALSE	canonical	1	139156	junction_1	119846.54961055641	NA	0	NA	TRUE	NA	NA	NA	A	coding	366	1101	129	1229	30.0	-4533	False	AATAAA	-9
PB.3712.50	chr14	-	2055	3	novel_not_in_catalog	IGHV4-31	novel	428	2	NA	NA	34	2248	any annotated donor/acceptor	FALSE	canonical	1	4877	junction_1	34370.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	133	402	39	440	70.0	NA	False	NA	NA
PB.10792.12	chr7	-	2246	1	novel_in_catalog	TMEM168	novel	7470	5	NA	NA	1	-15132	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.10792.11	chr7	-	2651	1	novel_in_catalog	TMEM168	novel	7470	5	NA	NA	-7	-14735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-8	True	NA	NA
PB.10792.10	chr7	-	2520	5	full-splice_match	TMEM168	ENST00000312814.10	7470	5	203	4747	1	7	multi-exon	FALSE	canonical	1	114699	junction_3	53424.33458347891	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	407	2452	15.0	3	True	NA	NA
PB.9978.4	chr6	-	1172	6	full-splice_match	OARD1	ENST00000424266.6	1337	6	177	-12	-41	-1	multi-exon	FALSE	canonical	1	147660	junction_5	107847.92902860953	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	168	626	15.0	-11	True	AATAAA	-18
PB.63.1	chr1	-	3081	8	full-splice_match	TNFRSF9	ENST00000377507.7	1923	8	-7	-1151	-7	1151	multi-exon	FALSE	canonical	1	20806	junction_1	5245.032180209057	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	175	942	20.0	-37	False	NA	NA
PB.63.2	chr1	-	1907	8	full-splice_match	TNFRSF9	ENST00000377507.7	1923	8	28	-12	28	12	multi-exon	FALSE	canonical	1	20806	junction_1	5245.032180209057	NA	2	1	TRUE	NA	NA	NA	C	coding	255	768	140	907	50.0	-2	True	NA	NA
PB.63.3	chr1	-	1447	8	full-splice_match	TNFRSF9	ENST00000377507.7	1923	8	0	476	0	-476	multi-exon	FALSE	canonical	1	20806	junction_1	5245.032180209057	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	168	935	90.0	-30	False	NA	NA
PB.9978.1	chr6	-	3190	6	full-splice_match	OARD1	ENST00000424266.6	1337	6	191	-2044	-27	21	multi-exon	FALSE	canonical	1	147660	junction_5	107847.92902860953	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	154	612	15.0	3	True	AATAAA	-41
PB.9978.2	chr6	-	3095	6	full-splice_match	OARD1	ENST00000479950.5	3330	6	240	-5	-31	5	multi-exon	FALSE	canonical	1	151195	junction_5	106776.59261729605	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	75	533	15.0	-1	True	AATAAA	-25
PB.9978.3	chr6	-	1640	6	full-splice_match	OARD1	ENST00000424266.6	1337	6	183	-486	-35	160	multi-exon	FALSE	canonical	1	147660	junction_5	107847.92902860953	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	162	620	85.0	-5	True	NA	NA
PB.6003.6	chr19	+	2168	14	novel_in_catalog	PLD3	novel	544	4	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	7926	junction_2	798105.8042571465	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	388	1860	20.0	-4	True	AGTAAA	-12
PB.6003.7	chr19	+	2188	13	novel_in_catalog	PLD3	novel	544	4	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	40738	junction_1	717408.5867001289	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	408	1880	20.0	-1	True	AGTAAA	-12
PB.6003.4	chr19	+	2158	13	full-splice_match	PLD3	ENST00000409735.8	2140	13	-17	-1	1	1	multi-exon	FALSE	canonical	1	103334	junction_1	703611.9138440979	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	375	1847	15.0	-24	True	AGTAAA	-15
PB.6003.5	chr19	+	2304	13	novel_in_catalog	PLD3	novel	544	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	481948	junction_1	623896.3957703578	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	523	1995	20.0	-7	True	AGTAAA	-13
PB.6003.2	chr19	+	2285	13	novel_in_catalog	PLD3	novel	544	4	NA	NA	-5	1	intron_retention	FALSE	canonical	1	64427	junction_1	712169.3417853065	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	502	1974	15.0	-30	True	AGTAAA	-15
PB.6003.3	chr19	+	2360	13	novel_in_catalog	PLD3	novel	544	4	NA	NA	1	3	intron_retention	FALSE	canonical	1	63695	junction_2	806860.1046849241	NA	1	1	TRUE	NA	NA	NA	C	coding	490	1473	575	2047	10.0	-24	True	AGTAAA	-17
PB.5905.3	chr19	+	2782	4	novel_not_in_catalog	NUDT19	novel	2967	3	NA	NA	-140	-7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	55712.069215047304	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	141	1268	50.0	0	True	AATAAA	-17
PB.6003.1	chr19	+	2251	13	novel_in_catalog	PLD3	novel	544	4	NA	NA	34	6	combination_of_known_junctions	TRUE	canonical	1	10270	junction_1	724178.4287341826	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	463	1935	10.0	-7098	False	AGTAAA	-20
PB.11463.13	chr9	+	3572	9	full-splice_match	SNAPC3	ENST00000380821.7	5680	9	173	1935	-2	-261	multi-exon	FALSE	canonical	1	307315	junction_6	53110.426759812195	NA	2	NA	TRUE	NA	NA	NA	C	coding	411	1236	4	1239	30.0	1	True	AATACA	-32
PB.11463.12	chr9	+	3964	9	full-splice_match	SNAPC3	ENST00000380821.7	5680	9	172	1544	-3	130	multi-exon	FALSE	canonical	1	307315	junction_6	53110.426759812195	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	5	1240	25.0	0	True	AATGAA	-35
PB.6003.8	chr19	+	2195	14	novel_not_in_catalog	PLD3	novel	544	4	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_13	799501.8310998862	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	515	1987	15.0	1	True	AGTAAA	-15
PB.6003.9	chr19	+	2081	14	novel_not_in_catalog	PLD3	novel	544	4	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	862967.2483350995	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	403	1875	20.0	4	True	AGTAAA	-13
PB.5140.1	chr17	-	1470	5	full-splice_match	SUPT4H1	ENST00000225504.7	1489	5	19	0	-16	0	multi-exon	FALSE	canonical	1	739534	junction_2	188436.84549670745	NA	2	1	TRUE	NA	NA	NA	A	coding	117	354	49	402	15.0	-15	True	NA	NA
PB.9008.17	chr4	+	2580	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	379	962	0	574	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	137	1936	45.0	-3	True	TTTAAA	-38
PB.8291.2	chr3	+	3308	3	incomplete-splice_match	C3orf52	ENST00000497610.1	652	4	-84	4005	5	-4005	3prime_fragment	FALSE	canonical	1	50777	junction_1	619.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	55	510	95.0	-4	True	NA	NA
PB.657.1	chr1	+	5633	26	novel_not_in_catalog	NBPF8	novel	5330	25	NA	NA	-21324	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	25	3	TRUE	NA	NA	NA	B	coding	942	2829	1287	4115	10.0	NA	False	ATTAAA	-16
PB.657.2	chr1	+	3485	23	novel_not_in_catalog	NBPF8	novel	5330	25	NA	NA	-21309	-2431	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	840	2520	964	3483	65.0	NA	False	NA	NA
PB.657.3	chr1	+	1559	1	intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.657.4	chr1	+	2693	14	novel_not_in_catalog	NBPF8	novel	5330	25	NA	NA	15938	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	481	1446	119	1564	15.0	NA	False	ATTAAA	-15
PB.11195.2	chr8	-	4739	2	intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	AATGAA	-9
PB.82.1	chr1	+	4523	27	full-splice_match	UBE4B	ENST00000253251.12	4772	27	113	136	113	-136	multi-exon	FALSE	canonical	1	184369	junction_13	85941.29410924412	NA	2	NA	TRUE	NA	NA	NA	C	coding	1173	3522	727	4248	30.0	-13	True	AATAAA	-19
PB.562.1	chr1	-	1366	1	antisense	novelGene_AC118553.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.2130.11	chr11	+	4076	4	novel_in_catalog	CCND1	novel	4307	5	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	3690	junction_2	789202.3117076296	NA	9	1	TRUE	NA	NA	NA	C	coding	139	420	158	577	5.0	1	True	AATAAA	-15
PB.9764.21	chr6	-	3368	17	novel_in_catalog	NUP153	novel	5811	21	NA	NA	-69	-14255	no_combination_of_known_junctions	FALSE	canonical	1	52799	junction_10	139465.54622692658	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2850	517	3366	60.0	-18	True	TTTAAA	-27
PB.8127.11	chr3	+	3819	22	novel_not_in_catalog	RBM6	novel	2260	17	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	11917	junction_6	252057.89086739885	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	1899	3704	15.0	-785	False	AATAAA	-16
PB.9923.8	chr6	-	3278	16	novel_in_catalog	RGL2	novel	2316	15	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	126334	junction_15	157726.40756722452	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	1702	2832	10.0	-16	True	AATAAA	-21
PB.3682.14	chr14	+	2484	16	full-splice_match	MARK3	ENST00000303622.13	3283	16	-131	930	-1	-165	multi-exon	FALSE	canonical	1	381516	junction_2	135653.38971052496	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1416	1068	2483	75.0	-5	True	AATAAA	-41
PB.4321.6	chr16	-	3368	21	novel_in_catalog	ARHGAP17	novel	3461	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	7081	junction_20	165598.33716160167	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	175	2499	40.0	-8	True	ATTAAA	-21
PB.9923.1	chr6	-	2899	18	full-splice_match	RGL2	ENST00000497454.5	3278	18	378	1	-16	-1	multi-exon	TRUE	canonical	1	126334	junction_17	153404.13214581856	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	119	2452	15.0	-21	True	AATAAA	-22
PB.9923.2	chr6	-	3266	16	novel_not_in_catalog	RGL2	novel	2316	15	NA	NA	-31	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	177897.03075206175	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	139	918	15.0	6335	False	AATAAA	-22
PB.9923.3	chr6	-	3195	17	novel_in_catalog	RGL2	novel	2316	15	NA	NA	-44	-1	intron_retention	FALSE	canonical	1	126334	junction_16	152721.381717234	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	1735	2748	15.0	6322	False	AATAAA	-22
PB.3682.16	chr14	+	3383	17	novel_in_catalog	MARK3	novel	2643	16	NA	NA	-2	0	intron_retention	FALSE	canonical	1	71809	junction_16	210341.45651140634	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	616	2784	25.0	0	True	ATTAAA	-18
PB.9923.6	chr6	-	2880	18	novel_not_in_catalog	RGL2	novel	2316	15	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	37921	junction_8	182350.31630886917	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	119	1408	15.0	-21	True	AATAAA	-22
PB.9923.7	chr6	-	2727	18	novel_not_in_catalog	RGL2	novel	2316	15	NA	NA	-34	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	184282.64830548866	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	193	2280	15.0	6741	False	AATAAA	-22
PB.11391.7	chr8	+	2596	9	novel_in_catalog	GPAA1	novel	878	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	546511	junction_1	245858.2090102952	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	690	1544	10.0	-13	True	AATAAA	-22
PB.7244.1	chr20	+	3378	15	full-splice_match	ZNF341	ENST00000375200.5	3579	15	215	-14	-27	14	multi-exon	FALSE	canonical	1	7012	junction_6	13992.067418282228	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	48	2612	15.0	-21	False	NA	NA
PB.7244.2	chr20	+	3341	15	full-splice_match	ZNF341	ENST00000342427.6	3661	15	335	-15	-10	15	multi-exon	FALSE	canonical	1	15253	junction_6	13213.313099341303	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	31	2574	15.0	-4	True	NA	NA
PB.3682.17	chr14	+	2964	17	novel_in_catalog	MARK3	novel	2643	16	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	71809	junction_16	191082.3675342243	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	1063	2832	25.0	0	True	ATTAAA	-16
PB.11391.3	chr8	+	2158	11	novel_in_catalog	GPAA1	novel	878	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	546511	junction_1	229845.51000193588	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	1226	2068	10.0	-23	True	AATAAA	-22
PB.11391.2	chr8	+	2036	12	novel_not_in_catalog	GPAA1	novel	878	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	8446	junction_6	353113.75610017456	NA	2	2	TRUE	NA	NA	NA	C	coding	607	1824	122	1945	5.0	-24	True	AATAAA	-23
PB.11391.1	chr8	+	2395	10	novel_in_catalog	GPAA1	novel	878	6	NA	NA	6	-1	intron_retention	FALSE	canonical	1	546511	junction_1	218115.54511466317	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	713	1801	10.0	-36	True	AATAAA	-22
PB.841.30	chr1	+	2552	11	full-splice_match	IFI16	ENST00000368132.7	2704	11	7	145	-2	-118	multi-exon	FALSE	canonical	1	295	junction_7	338257.7347500128	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	258	2447	30.0	-2	True	AATACA	-23
PB.1234.6	chr1	-	7115	19	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_15	147773.02861943754	NA	3	NA	TRUE	NA	NA	NA	B	coding	1629	4890	206	5095	35.0	50	True	AATAAA	-17
PB.3682.10	chr14	+	3169	15	novel_in_catalog	MARK3	novel	2643	16	NA	NA	1	0	intron_retention	FALSE	canonical	1	29383	junction_14	186781.9902008019	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	638	2569	25.0	-22	True	ATTAAA	-19
PB.11647.22	chr9	-	1396	7	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	-1	41	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	60611.11624666441	NA	0	NA	TRUE	NA	NA	NA	B	coding	427	1281	115	1395	70.0	-22	True	ATTAAA	-5
PB.841.33	chr1	+	3234	10	novel_in_catalog	IFI16	novel	856	3	NA	NA	2	-1	intron_retention	FALSE	canonical	1	295	junction_6	356435.37558285217	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	1273	2988	30.0	2	True	AATAAA	-20
PB.11647.20	chr9	-	3405	13	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1166	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	85752.90828737563	NA	3	1	TRUE	NA	NA	NA	B	coding	831	2493	912	3404	65.0	-4	True	NA	NA
PB.11647.21	chr9	-	1505	7	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	-1	41	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	65937.74827989066	NA	0	NA	TRUE	NA	NA	NA	B	coding	427	1281	224	1504	70.0	-5	True	ATTAAA	-5
PB.9008.15	chr4	+	3645	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	376	-100	-3	100	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	140	1939	50.0	-6	True	ATTAAA	-27
PB.11158.2	chr8	-	2142	1	novel_in_catalog	CYP7B1	novel	587	5	NA	NA	22821	-3089	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	316	False	AATAAA	-16
PB.11158.3	chr8	-	2990	1	novel_in_catalog	CYP7B1	novel	587	5	NA	NA	21472	-3590	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1033	False	NA	NA
PB.11158.4	chr8	-	1998	6	full-splice_match	CYP7B1	ENST00000310193.3	2202	6	2	202	2	-202	multi-exon	FALSE	canonical	1	28093	junction_5	18554.74894467721	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	173	1693	30.0	2	True	AATAAA	-15
PB.3682.12	chr14	+	2891	18	novel_not_in_catalog	MARK3	novel	2643	16	NA	NA	6	-7	intron_retention	FALSE	non_canonical	0	0	junction_11	222876.3759022206	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	1993	2844	45.0	-17	True	ATTAAA	-12
PB.9883.2	chr6	-	2319	2	novel_not_in_catalog	HSPA1L	novel	2544	2	NA	NA	-589	-122	any annotated donor/acceptor	FALSE	canonical	1	4626	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	88	2013	45.0	6952	False	AGTAAA	-10
PB.841.35	chr1	+	2525	12	full-splice_match	IFI16	ENST00000295809.11	2867	12	22	320	22	-289	multi-exon	FALSE	canonical	1	316112	junction_8	244872.14013254124	NA	4	1	TRUE	NA	NA	NA	C	coding	764	2292	234	2525	65.0	22	True	NA	NA
PB.2885.11	chr12	+	3679	14	incomplete-splice_match	UBE3B	ENST00000342494.7	5722	28	29919	1	-889	-1	5prime_fragment	FALSE	canonical	1	122459	junction_1	32567.063761889956	NA	5	NA	TRUE	NA	NA	NA	C	coding	541	1626	135	1760	15.0	NA	False	ATTAAA	-16
PB.5497.1	chr18	+	2611	1	intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.7353.11	chr20	+	2690	5	incomplete-splice_match	PTPN1	ENST00000371621.4	4008	10	26	8537	26	-8056	3prime_fragment	FALSE	canonical	1	576471	junction_2	60656.82291125624	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	149	853	90.0	-3	True	NA	NA
PB.7353.10	chr20	+	4408	9	incomplete-splice_match	PTPN1	ENST00000371621.4	4008	10	137	694	137	-213	intron_retention	FALSE	canonical	1	532368	junction_6	66772.13064220731	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	38	1336	85.0	-3478	False	AATAAA	-11
PB.7353.13	chr20	+	4469	9	novel_not_in_catalog	PTPN1	novel	3469	9	NA	NA	27	-10	intron_retention	FALSE	non_canonical	0	0	junction_8	278590.14420041745	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	148	1236	40.0	-2	True	AATAAA	-11
PB.7353.12	chr20	+	5057	8	novel_in_catalog	PTPN1	novel	3469	9	NA	NA	26	-213	intron_retention	FALSE	canonical	1	533353	junction_7	62804.96099539154	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	1389	1985	85.0	-3	True	AATAAA	-11
PB.2201.10	chr11	-	1677	9	full-splice_match	CCDC90B	ENST00000529611.5	1986	9	10	299	0	-4	multi-exon	FALSE	canonical	1	64997	junction_8	106554.3142333993	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	1066	1527	30.0	-11	True	ACTAAA	-23
PB.2201.11	chr11	-	1805	4	full-splice_match	CCDC90B	ENST00000526631.1	628	4	-8	-1169	2	-28	multi-exon	FALSE	canonical	1	284153	junction_3	43812.11615016507	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	15	470	95.0	-9	True	NA	NA
PB.46.1	chr1	+	2868	7	full-splice_match	DFFB	ENST00000378209.7	3028	7	177	-17	-2	17	multi-exon	FALSE	canonical	1	28870	junction_3	11410.261239584113	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	147	1163	30.0	-18	True	AATAAA	-35
PB.11398.10	chr8	+	3527	11	novel_not_in_catalog	HSF1	novel	2105	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	29937	junction_6	381266.2705233181	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	2403	3137	10.0	-5	True	TATAAA	-17
PB.6638.15	chr2	-	5062	20	full-splice_match	KANSL3	ENST00000444759.5	2717	20	39	-2384	7	-28	multi-exon	FALSE	canonical	1	25563	junction_17	87916.71410089875	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	635	2653	75.0	6	True	NA	NA
PB.11584.1	chr9	+	2004	17	novel_in_catalog	CBWD5	novel	541	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1072.681016192605	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	120	662	20.0	NA	False	AATAAA	-14
PB.4189.1	chr16	-	1670	7	novel_not_in_catalog	PRSS33	novel	1694	6	NA	NA	397	2	any annotated donor/acceptor	FALSE	canonical	1	278	junction_6	4433.134256181887	NA	3	1	TRUE	NA	NA	NA	A	coding	301	906	72	977	15.0	70	False	NA	NA
PB.11866.3	chr9	-	11052	26	full-splice_match	SETX	ENST00000224140.5	11100	26	-37	85	-37	-85	multi-exon	FALSE	canonical	1	189648	junction_22	82802.08288023679	NA	1	NA	TRUE	NA	NA	NA	C	coding	2677	8034	221	8254	10.0	2	True	AGTAAA	-19
PB.11167.1	chr8	-	8144	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	29	1769	29	-1769	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	1222	3669	231	3899	15.0	22	True	AATAAA	-25
PB.11584.6	chr9	+	1708	19	novel_not_in_catalog	CBWD5	novel	541	4	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1018.8185423431505	NA	12	3	TRUE	NA	NA	NA	C	coding	180	543	88	630	30.0	NA	False	AATAAA	-18
PB.12090.13	chrX	-	4994	27	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	2	-15	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	188408.16829297715	NA	3	1	TRUE	NA	NA	NA	C	coding	1439	4320	318	4637	85.0	0	True	AATAAA	-32
PB.12090.10	chrX	-	5638	27	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	-1	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	149549.3684515201	NA	0	NA	TRUE	NA	NA	NA	C	coding	1557	4674	321	4994	85.0	-3	True	AATAAA	-32
PB.12090.11	chrX	-	5516	27	novel_not_in_catalog	KDM5C	novel	6096	24	NA	NA	1	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154531.7960237486	NA	1	NA	TRUE	NA	NA	NA	C	coding	1560	4683	319	5001	85.0	-1	True	AATAAA	-32
PB.11584.5	chr9	+	3444	15	novel_in_catalog	CBWD5	novel	541	4	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	1135.738678983319	NA	2	1	TRUE	NA	NA	NA	C	coding	180	543	88	630	25.0	NA	False	AATAAA	-15
PB.2528.8	chr12	-	5387	26	novel_not_in_catalog	IPO8	novel	5325	25	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	1	2860	junction_24	84889.54079508263	NA	0	NA	TRUE	NA	NA	NA	C	coding	1020	3063	455	3517	15.0	-3	True	AATAAA	-19
PB.2528.9	chr12	-	5035	24	novel_in_catalog	IPO8	novel	5325	25	NA	NA	10	-2	no_combination_of_known_junctions	FALSE	canonical	1	7390	junction_10	71935.61857939887	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	1870	3165	15.0	9	True	AATAAA	-19
PB.2528.6	chr12	-	5053	24	novel_in_catalog	IPO8	novel	5325	25	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	3425	junction_21	71174.60838434874	NA	1	NA	TRUE	NA	NA	NA	C	coding	984	2955	223	3177	25.0	-1	True	AATAAA	-25
PB.2528.4	chr12	-	5309	26	novel_not_in_catalog	IPO8	novel	5325	25	NA	NA	0	5	any annotated donor/acceptor	FALSE	canonical	1	8731	junction_24	83125.10368543067	NA	0	NA	TRUE	NA	NA	NA	C	coding	1069	3210	223	3432	25.0	-1	True	AATAAA	-26
PB.10798.2	chr7	+	2137	3	full-splice_match	CAV2	ENST00000222693.4	3301	3	294	870	-56	-870	multi-exon	FALSE	canonical	1	1175875	junction_2	187114.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	99	587	90.0	-7527	False	NA	NA
PB.2528.3	chr12	-	5205	25	full-splice_match	IPO8	ENST00000256079.8	5325	25	118	2	1	-2	multi-exon	FALSE	canonical	1	171635	junction_21	50280.20376266319	NA	3	NA	TRUE	NA	NA	NA	C	coding	1037	3114	222	3335	15.0	0	True	AATAAA	-19
PB.2528.1	chr12	-	6159	24	novel_in_catalog	IPO8	novel	5325	25	NA	NA	-10	4	intron_retention	FALSE	canonical	1	171635	junction_20	51333.462726283135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	233	3262	25.0	-11	True	AATAAA	-25
PB.7052.50	chr2	-	6452	42	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	-16	225	any annotated donor/acceptor	FALSE	canonical	1	74585	junction_39	289178.3569290016	NA	2	1	TRUE	NA	NA	NA	C	coding	1991	5976	139	6114	15.0	26	True	AATAAA	-15
PB.7033.2	chr2	+	3558	25	novel_not_in_catalog	STK11IP	novel	3615	25	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	6300	junction_23	35643.91825517499	NA	0	NA	TRUE	NA	NA	NA	C	coding	1069	3210	94	3303	20.0	-11	True	AATAAA	-15
PB.11507.11	chr9	-	4064	27	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	12291	junction_26	99287.41951717096	NA	3	NA	TRUE	NA	NA	NA	C	coding	786	2361	896	3256	10.0	-1	True	AATAAA	-12
PB.10186.7	chr6	+	1666	2	full-splice_match	PLN	ENST00000357525.5	2001	2	28	307	28	-307	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-2	True	NA	NA
PB.11363.1	chr8	-	3155	2	full-splice_match	JRK	ENST00000612905.1	9124	2	12	5957	6	2565	multi-exon	FALSE	canonical	1	29738	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	514	2220	20.0	-16	True	AGTAAA	-19
PB.11363.2	chr8	-	2426	2	full-splice_match	JRK	ENST00000612905.1	9124	2	12	6686	6	1836	multi-exon	FALSE	canonical	1	29738	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	514	2220	25.0	-16	True	AATACA	-15
PB.10851.1	chr7	-	5964	9	full-splice_match	PODXL	ENST00000378555.7	2105	9	-3	-3856	-1	-13	multi-exon	FALSE	canonical	1	117967	junction_7	215999.8495265318	NA	0	NA	TRUE	NA	NA	NA	A	coding	558	1677	252	1928	30.0	6	True	ATTAAA	-12
PB.9008.11	chr4	+	3517	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	383	21	1	-21	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	133	1932	20.0	1	True	AATAAA	-13
PB.6984.23	chr2	-	4881	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-906	-422250	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	3	NA	TRUE	NA	NA	NA	B	coding	300	903	226	1128	45.0	-32	False	NA	NA
PB.4450.1	chr16	-	2023	9	full-splice_match	CIAPIN1	ENST00000567518.5	2016	9	10	-17	-3	-1	multi-exon	FALSE	canonical	1	70251	junction_3	68198.492373251	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	124	1023	20.0	-25	True	AATAAA	-32
PB.4450.2	chr16	-	1930	8	full-splice_match	CIAPIN1	ENST00000569370.5	1559	8	2	-373	2	6	multi-exon	FALSE	canonical	1	25495	junction_2	108979.01624231545	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	119	919	25.0	-20	True	AATAAA	-21
PB.4450.3	chr16	-	2022	9	full-splice_match	CIAPIN1	ENST00000394391.8	2182	9	141	19	-10	-1	multi-exon	FALSE	canonical	1	70251	junction_3	96377.2345699926	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	102	1040	25.0	-3	True	AATAAA	-14
PB.4450.4	chr16	-	3497	8	novel_in_catalog	CIAPIN1	novel	2182	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	70251	junction_3	100082.25602361045	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	95	706	25.0	4	True	AATAAA	-13
PB.4450.5	chr16	-	1678	9	full-splice_match	CIAPIN1	ENST00000394391.8	2182	9	124	380	2	5	multi-exon	FALSE	canonical	1	70251	junction_3	96377.2345699926	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	119	1057	20.0	-20	True	ATTAAA	-21
PB.1161.1	chr1	-	2930	6	novel_in_catalog	AL117348.2	novel	1625	8	NA	NA	88	-33189	intron_retention	FALSE	canonical	1	777757	junction_5	253213.79401414923	NA	0	NA	TRUE	NA	NA	NA	B	coding	273	822	1539	2360	25.0	59	False	AATAAA	-11
PB.6984.28	chr2	-	2839	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-843	-424229	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	12	NA	TRUE	NA	NA	NA	B	coding	300	903	163	1065	45.0	31	False	ATTAAA	-11
PB.11096.13	chr8	-	4923	17	novel_in_catalog	FGFR1	novel	6216	22	NA	NA	2	-22	intron_retention	FALSE	canonical	1	33832	junction_11	275956.1505211245	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	2669	4165	85.0	1	True	NA	NA
PB.440.2	chr1	-	2665	1	full-splice_match	JUN	ENST00000371222.3	3540	1	278	597	278	-597	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	327	984	992	1975	25.0	-3	True	AATAAA	-15
PB.9330.7	chr5	-	2508	4	full-splice_match	TMEM167A	ENST00000502346.1	4630	4	104	2018	-25	-802	multi-exon	FALSE	canonical	1	10146	junction_2	183873.9351210195	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-20	True	ATTAAA	-17
PB.5726.10	chr19	+	2007	18	novel_not_in_catalog	PRKCSH	novel	2209	19	NA	NA	25	0	any annotated donor/acceptor	FALSE	canonical	1	8197	junction_1	968546.1483965288	NA	1	NA	TRUE	NA	NA	NA	B	coding	525	1578	94	1671	15.0	25	True	AATAAA	-16
PB.1039.2	chr1	-	2676	10	novel_in_catalog	PTPN7	novel	3265	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	7363	junction_9	85527.72228802646	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	67	1086	10.0	-7	True	AATAAA	-19
PB.4477.1	chr16	-	2357	1	genic	CIAO2B	novel	NA	NA	NA	NA	2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	13	False	AATAAA	-22
PB.4477.2	chr16	-	678	5	novel_not_in_catalog	CIAO2B	novel	676	5	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	992972.4018390441	NA	0	NA	TRUE	NA	NA	NA	B	coding	163	492	51	542	15.0	14	False	AATAAA	-14
PB.4819.10	chr17	+	1812	12	full-splice_match	PRPSAP2	ENST00000268835.6	1910	12	57	41	1	-41	multi-exon	FALSE	canonical	1	54007	junction_1	119225.69738819932	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	263	1336	65.0	33	True	NA	NA
PB.8639.1	chr3	-	1982	11	full-splice_match	IQCG	ENST00000455191.5	1981	11	0	-1	0	-1	multi-exon	FALSE	canonical	1	44926	junction_10	18102.85865381487	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	147	1478	15.0	-30	True	AATAAA	-25
PB.1039.4	chr1	-	3270	9	novel_in_catalog	PTPN7	novel	3265	9	NA	NA	-65	-2	intron_retention	FALSE	canonical	1	11913	junction_7	110400.20845251776	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	758	1681	15.0	2018	False	AATAAA	-18
PB.8639.2	chr3	-	2254	12	full-splice_match	IQCG	ENST00000265239.10	2262	12	4	4	0	-1	multi-exon	FALSE	canonical	1	31193	junction_10	21554.84510163253	NA	1	1	TRUE	NA	NA	NA	C	coding	443	1332	422	1753	20.0	-25	True	AATAAA	-22
PB.7085.1	chr2	+	2574	9	incomplete-splice_match	AGAP1	ENST00000614409.4	9932	16	98078	6546	-76140	-228	5prime_fragment	FALSE	canonical	1	46775	junction_3	40940.47059680067	NA	22	2	TRUE	NA	NA	NA	A	coding	453	1362	81	1442	30.0	730	False	AATAAA	-18
PB.431.1	chr1	-	3394	7	full-splice_match	TTC22	ENST00000371276.8	3345	7	-52	3	-52	-3	multi-exon	FALSE	canonical	1	30676	junction_2	8345.482310807447	NA	1	NA	TRUE	NA	NA	NA	A	coding	569	1710	157	1866	35.0	-10	True	AATAAA	-13
PB.11604.16	chr9	-	2429	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	0	257	0	-257	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	550	1191	15.0	6116	False	TATAAA	-22
PB.11604.17	chr9	-	2558	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	-38	265	0	-265	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	687	1328	10.0	6116	False	TATAAA	-14
PB.11604.14	chr9	-	2602	6	novel_not_in_catalog	ZFAND5	novel	5310	6	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	canonical	1	198	junction_5	211163.77935848755	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	553	1110	25.0	0	True	AATAAA	-17
PB.11604.15	chr9	-	2375	7	full-splice_match	ZFAND5	ENST00000343431.6	1073	7	70	-1372	36	-3	multi-exon	FALSE	canonical	1	23045	junction_6	251851.60436681536	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	242	883	25.0	-20	True	AATAAA	-17
PB.11604.12	chr9	-	2459	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	323	3	102	-3	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	326	967	25.0	6477	False	AATAAA	-17
PB.1039.6	chr1	-	2869	10	novel_not_in_catalog	PTPN7	novel	3265	9	NA	NA	2	-5	intron_retention	FALSE	canonical	1	219	junction_7	88171.55227673429	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	714	1283	10.0	1	True	AATAAA	-15
PB.9330.1	chr5	-	4522	4	full-splice_match	TMEM167A	ENST00000502346.1	4630	4	107	1	-22	-1	multi-exon	FALSE	canonical	1	10146	junction_2	183873.9351210195	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	2807	3157	15.0	-17	True	AATAAA	-19
PB.11604.18	chr9	-	1595	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	-16	1206	-16	169	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	665	1306	65.0	-6	True	NA	NA
PB.11604.19	chr9	-	1493	6	full-splice_match	ZFAND5	ENST00000376960.8	2686	6	22	1171	-16	204	multi-exon	FALSE	canonical	1	124287	junction_4	172447.77381874202	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	528	1169	20.0	-6	True	AATAAA	-24
PB.1039.8	chr1	-	2057	1	novel_in_catalog	PTPN7	novel	3765	10	NA	NA	1	-90	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	168	507	554	1060	85.0	-3	True	NA	NA
PB.8874.9	chr4	-	2405	7	full-splice_match	PPM1K	ENST00000608933.5	6484	7	-13	4092	-13	159	multi-exon	FALSE	canonical	1	105597	junction_6	56982.30314877496	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	404	1522	95.0	3	True	NA	NA
PB.4863.2	chr17	-	2756	12	full-splice_match	FLOT2	ENST00000580805.5	2679	12	-78	1	-52	-1	multi-exon	FALSE	canonical	1	20276	junction_9	487923.1642652304	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	396	1535	10.0	1	True	AATAAA	-16
PB.4863.3	chr17	-	2566	11	full-splice_match	FLOT2	ENST00000394908.8	2618	11	47	5	20	-1	multi-exon	FALSE	canonical	1	459777	junction_10	285348.79937089275	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	59	1345	10.0	100	True	AATAAA	-16
PB.4863.1	chr17	-	2577	10	novel_in_catalog	FLOT2	novel	2756	13	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	1	55412	junction_8	437300.83715746226	NA	3	NA	TRUE	NA	NA	NA	C	coding	351	1056	300	1355	5.0	-1	True	AATAAA	-17
PB.287.1	chr1	+	1654	6	full-splice_match	ADPRHL2	ENST00000373178.4	1668	6	14	0	14	0	multi-exon	FALSE	canonical	1	250876	junction_1	122133.85045989502	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	32	1108	5.0	-6	True	AATAAA	-20
PB.4863.4	chr17	-	2611	1	genic	FLOT2	novel	NA	NA	NA	NA	-25	-12115	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	126	381	1613	1993	75.0	28	True	NA	NA
PB.4863.5	chr17	-	2416	1	genic	FLOT2	novel	NA	NA	NA	NA	-28	-12313	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	126	381	1616	1996	30.0	25	True	NA	NA
PB.1770.11	chr11	-	6015	34	novel_not_in_catalog	NUP98	novel	580	3	NA	NA	-13	6	any annotated donor/acceptor	FALSE	canonical	1	265	junction_33	135108.84207144304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1800	5403	326	5728	35.0	190	False	AATAAA	-22
PB.1770.12	chr11	-	5927	33	full-splice_match	NUP98	ENST00000359171.8	7023	33	235	861	4	6	multi-exon	FALSE	canonical	1	85348	junction_23	115696.25344353677	NA	0	NA	TRUE	NA	NA	NA	C	coding	1817	5454	187	5640	35.0	-4	True	AATAAA	-22
PB.1770.13	chr11	-	5875	33	full-splice_match	NUP98	ENST00000324932.11	6973	33	236	862	-4	6	multi-exon	FALSE	canonical	1	154074	junction_32	101951.66901618885	NA	0	NA	TRUE	NA	NA	NA	C	coding	1800	5403	186	5588	35.0	-3	True	AATAAA	-22
PB.1770.14	chr11	-	5843	33	novel_in_catalog	NUP98	novel	580	3	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	1	59108	junction_23	118094.69504753841	NA	0	NA	TRUE	NA	NA	NA	C	coding	1792	5379	178	5556	35.0	5	True	AATAAA	-22
PB.1770.15	chr11	-	5732	32	novel_in_catalog	NUP98	novel	580	3	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	1	30410	junction_21	123618.9529328928	NA	1	1	TRUE	NA	NA	NA	C	coding	1753	5262	184	5445	35.0	-1	True	AATAAA	-22
PB.1770.16	chr11	-	3517	19	novel_in_catalog	NUP98	novel	6973	33	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	1	30410	junction_8	142367.27460457102	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	181	2802	35.0	2	True	ATTAAA	-25
PB.1770.17	chr11	-	3660	20	full-splice_match	NUP98	ENST00000397004.8	3923	20	-13	276	-2	6	multi-exon	FALSE	canonical	1	154074	junction_19	105312.62002016883	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	184	2946	35.0	-1	True	ATTAAA	-24
PB.1770.18	chr11	-	3638	20	novel_in_catalog	NUP98	novel	6973	33	NA	NA	-4	6	combination_of_known_junctions	FALSE	canonical	1	59108	junction_10	132364.1867092748	NA	2	2	TRUE	NA	NA	NA	C	coding	912	2739	186	2924	35.0	-3	True	ATTAAA	-24
PB.1770.19	chr11	-	3821	21	novel_not_in_catalog	NUP98	novel	6973	33	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	1112	junction_20	171313.66300053243	NA	6	NA	TRUE	NA	NA	NA	C	coding	937	2814	301	3114	25.0	0	True	ATTAAA	-17
PB.9333.2	chr5	-	1258	9	full-splice_match	CCNH	ENST00000256897.8	1378	9	113	7	-2	2	multi-exon	FALSE	canonical	1	381544	junction_7	66027.60763120226	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	113	1084	30.0	-8	True	AATAAA	-17
PB.10547.1	chr7	+	4160	28	full-splice_match	EGFR	ENST00000275493.6	9821	28	-69	5730	0	-1439	multi-exon	TRUE	canonical	1	134206	junction_1	80533.30421450772	NA	1	NA	TRUE	NA	NA	NA	A	coding	1210	3633	247	3879	75.0	-1901	False	NA	NA
PB.3668.1	chr14	+	1770	2	intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-284	False	NA	NA
PB.11657.14	chr9	-	1947	3	full-splice_match	FAM120AOS	ENST00000479094.5	1905	3	-50	8	-12	-8	multi-exon	FALSE	canonical	1	65879	junction_2	107917.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	24	75	471	545	40.0	-21	True	AGTAAA	-17
PB.981.9	chr1	+	5942	24	novel_in_catalog	SMG7	novel	1190	8	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	8328	junction_1	143026.20855965163	NA	2	NA	TRUE	NA	NA	NA	C	coding	1099	3300	382	3681	15.0	-15	True	ATTAAA	-20
PB.8703.4	chr4	+	4506	5	incomplete-splice_match	CPEB2	ENST00000259997.9	5612	12	50189	0	-8	0	5prime_fragment	FALSE	canonical	1	111708	junction_1	19679.52975174966	NA	3	1	TRUE	NA	NA	NA	C	coding	160	483	255	737	25.0	NA	False	AATAAA	-16
PB.4467.8	chr16	-	8402	49	full-splice_match	CNOT1	ENST00000569240.5	7660	49	3	-745	1	1	multi-exon	FALSE	canonical	1	222174	junction_30	277621.20931012766	NA	1	NA	TRUE	NA	NA	NA	C	coding	2371	7116	279	7394	15.0	-6	True	ATTAAA	-15
PB.4467.9	chr16	-	8166	48	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-9	1	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_47	280445.0579409923	NA	1	NA	TRUE	NA	NA	NA	C	coding	2141	6426	733	7158	15.0	-31	False	ATTAAA	-15
PB.5380.3	chr18	+	6150	26	novel_in_catalog	PTPRM	novel	5941	33	NA	NA	11	-4	intron_retention	FALSE	canonical	1	27009	junction_1	59280.57195910309	NA	2	NA	TRUE	NA	NA	NA	B	coding	934	2805	74	2878	40.0	5	True	ATTAAA	-12
PB.5380.2	chr18	+	4302	27	novel_in_catalog	PTPRM	novel	5941	33	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	27009	junction_1	58145.06654082514	NA	0	NA	TRUE	NA	NA	NA	B	coding	1239	3720	87	3806	45.0	-8	True	GATAAA	-10
PB.5380.1	chr18	+	4513	27	novel_in_catalog	PTPRM	novel	5941	33	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	27009	junction_1	58145.06654082514	NA	0	NA	TRUE	NA	NA	NA	B	coding	1239	3720	97	3816	30.0	-18	True	ATTAAA	-19
PB.10134.12	chr6	+	4115	19	novel_not_in_catalog	CRYBG1	novel	9909	22	NA	NA	11208	-3	any annotated donor/acceptor	FALSE	canonical	1	152	junction_1	78517.07629051068	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	65	2224	35.0	-4277	False	AATAAA	-27
PB.10986.43	chr8	-	2032	11	novel_in_catalog	CTSB	novel	660	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	4557	junction_6	2221801.34109678	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	112	1227	25.0	0	True	AATAAA	-17
PB.10986.42	chr8	-	2076	11	novel_in_catalog	CTSB	novel	660	4	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	2828	junction_10	2130149.5909509733	NA	5	NA	TRUE	NA	NA	NA	C	coding	339	1020	252	1271	25.0	-6	True	AATAAA	-17
PB.8172.1	chr3	-	2410	11	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	-3	324	combination_of_known_junctions	FALSE	canonical	1	86704	junction_9	167842.4076718694	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	614	1729	55.0	-4	True	AATAAA	-10
PB.4467.1	chr16	-	8582	50	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	1	24161	junction_48	299370.23506759957	NA	6	1	TRUE	NA	NA	NA	C	coding	2376	7131	441	7571	15.0	-26	False	ATTAAA	-18
PB.4467.6	chr16	-	8123	48	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-1	3	no_combination_of_known_junctions	TRUE	canonical	1	1228	junction_47	290068.3261526599	NA	1	NA	TRUE	NA	NA	NA	C	coding	2136	6411	703	7113	10.0	-1	True	ATTAAA	-17
PB.4467.7	chr16	-	8534	50	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	31	junction_48	300635.0397898219	NA	11	NA	TRUE	NA	NA	NA	C	coding	2376	7131	396	7526	15.0	-1	True	ATTAAA	-15
PB.4467.4	chr16	-	8419	49	full-splice_match	CNOT1	ENST00000317147.9	8471	49	55	-3	1	3	multi-exon	FALSE	canonical	1	316180	junction_48	267800.25197142427	NA	2	NA	TRUE	NA	NA	NA	C	coding	2376	7131	279	7409	10.0	-6	True	ATTAAA	-17
PB.10986.44	chr8	-	2206	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	1704	junction_9	2299630.9643064383	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	383	1402	25.0	-3	True	AATAAA	-16
PB.8867.2	chr4	+	3460	18	incomplete-splice_match	AFF1	ENST00000307808.10	9390	20	215	8665	-40	-3328	3prime_fragment	FALSE	canonical	1	106514	junction_1	55827.660829144355	NA	0	NA	TRUE	NA	NA	NA	B	coding	1085	3255	206	3460	25.0	-41	True	AATAAA	-41
PB.8867.1	chr4	+	2962	3	incomplete-splice_match	AFF1	ENST00000544085.5	3644	23	-427	86622	-19	1030	3prime_fragment	FALSE	canonical	1	106514	junction_1	79650.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	376	1131	440	1570	80.0	4	True	NA	NA
PB.1361.1	chr10	+	4058	9	novel_not_in_catalog	CCDC7	novel	1819	17	NA	NA	4	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	24875.251975796647	NA	3	1	TRUE	NA	NA	NA	A	coding	122	369	803	1171	20.0	4	True	NA	NA
PB.5387.1	chr18	+	3733	10	full-splice_match	RALBP1	ENST00000383432.7	4224	10	-27	518	-27	-516	multi-exon	FALSE	canonical	1	211265	junction_4	117769.48434385406	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	105	2072	50.0	-282	False	AATAAA	-18
PB.5013.1	chr17	-	3160	2	novel_not_in_catalog	BRCA1	novel	2534	8	NA	NA	-54	-42086	intron_retention	FALSE	canonical	1	22	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	5	True	NA	NA
PB.6555.4	chr2	+	2438	10	full-splice_match	STAMBP	ENST00000394070.6	6691	10	-37	4290	-4	76	multi-exon	FALSE	canonical	1	75465	junction_1	140602.3076843792	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	541	1815	15.0	22	True	AATAAA	-44
PB.6555.5	chr2	+	2147	10	novel_in_catalog	STAMBP	novel	6277	10	NA	NA	-4	77	combination_of_known_junctions	FALSE	canonical	1	15926	junction_1	192505.5107740946	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	654	1523	15.0	22	True	AATAAA	-45
PB.127.14	chr1	-	2743	12	full-splice_match	RCC2	ENST00000375433.3	2030	12	296	-1009	296	172	multi-exon	FALSE	canonical	1	241403	junction_4	82323.91351663388	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	442	1320	35.0	3209	False	NA	NA
PB.1051.52	chr1	+	4821	18	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	311	junction_1	199194.38095987085	NA	3	1	TRUE	NA	NA	NA	C	coding	810	2433	664	3096	25.0	83	False	AATAAA	-18
PB.4252.18	chr16	-	3681	22	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	12343	junction_4	145910.25139719844	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	174	1298	15.0	-29	True	AATAAA	-13
PB.4252.19	chr16	-	3950	24	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	1256	junction_17	142797.65256389207	NA	20	1	TRUE	NA	NA	NA	C	coding	1023	3072	161	3232	15.0	-16	True	AATAAA	-12
PB.4252.12	chr16	-	3766	22	novel_in_catalog	ZC3H7A	novel	3845	22	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	3884	junction_16	130187.41567517733	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	168	3044	5.0	-23	True	AATAAA	-16
PB.4252.10	chr16	-	3726	22	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	609	0	any annotated donor/acceptor	FALSE	canonical	1	1289	junction_21	118636.40368184785	NA	2	NA	TRUE	NA	NA	NA	C	coding	987	2964	37	3000	5.0	1691	False	AATAAA	-20
PB.10212.1	chr6	+	2055	8	novel_in_catalog	AKAP7	novel	2954	8	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	1	18577	junction_1	19600.575391387607	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	73	1128	5.0	223	False	AATAAA	-16
PB.4252.16	chr16	-	3805	23	full-splice_match	ZC3H7A	ENST00000355758.8	3825	23	9	11	9	-2	multi-exon	FALSE	canonical	1	93172	junction_22	104517.98687315274	NA	3	1	TRUE	NA	NA	NA	C	coding	971	2916	170	3085	10.0	-25	True	AATAAA	-14
PB.4252.17	chr16	-	3750	22	novel_not_in_catalog	ZC3H7A	novel	3845	22	NA	NA	6	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	130329.64066239196	NA	11	3	TRUE	NA	NA	NA	C	coding	962	2889	142	3030	10.0	10	True	AATAAA	-14
PB.12316.20	chrX	+	2062	4	novel_not_in_catalog	MAGEA12	novel	1761	3	NA	NA	-15	12	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	543	1487	20.0	40	False	AATAAA	-16
PB.721.1	chr1	+	873	2	full-splice_match	MRPS21	ENST00000581066.2	1462	2	-43	632	-43	-632	multi-exon	FALSE	canonical	1	1945722	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	9	True	AATAAA	-19
PB.11676.5	chr9	-	4161	4	novel_in_catalog	TRMO	novel	1647	5	NA	NA	-24	2	intron_retention	FALSE	canonical	1	65756	junction_3	33163.33889838128	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	2791	3978	60.0	8091	False	AATAAA	-17
PB.11058.1	chr8	-	2104	1	incomplete-splice_match	ZNF395	ENST00000344423.9	4808	10	38771	7	3871	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	129	390	184	573	15.0	-8421	False	AATAAA	-15
PB.8175.1	chr3	-	1797	3	antisense	novelGene_ITIH1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	446	junction_2	854.5	NA	0	NA	FALSE	NA	NA	NA	A	coding	77	234	111	344	15.0	-1318	False	NA	NA
PB.5003.6	chr17	-	1392	8	novel_in_catalog	EZH1	novel	4623	21	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	26155	junction_4	80721.61383219162	NA	40	6	TRUE	NA	NA	NA	C	coding	277	834	138	971	35.0	-9	True	AATAAA	-18
PB.5003.5	chr17	-	2768	19	full-splice_match	EZH1	ENST00000586103.5	2752	19	-16	0	0	0	multi-exon	FALSE	canonical	1	59808	junction_18	44925.21659696201	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	124	2235	85.0	5	True	NA	NA
PB.5003.4	chr17	-	5018	17	novel_in_catalog	EZH1	novel	4623	21	NA	NA	-1	-44	intron_retention	FALSE	canonical	1	14760	junction_10	63640.45218341378	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	1242	1895	20.0	-14	True	AATAAA	-14
PB.5003.3	chr17	-	5375	20	novel_not_in_catalog	EZH1	novel	4623	21	NA	NA	0	-44	intron_retention	FALSE	canonical	1	723	junction_14	64983.37797286737	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	135	2252	20.0	-6	True	AATAAA	-14
PB.5003.2	chr17	-	4461	20	full-splice_match	EZH1	ENST00000585893.5	2394	20	-1	-2066	-1	-44	multi-exon	FALSE	canonical	1	26155	junction_16	60999.89734063384	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	125	2248	20.0	4	True	AATAAA	-14
PB.5003.1	chr17	-	4610	21	full-splice_match	EZH1	ENST00000428826.6	4623	21	-31	44	-12	-44	multi-exon	FALSE	canonical	1	59808	junction_20	47664.429142994035	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	154	2397	20.0	-25	True	AATAAA	-14
PB.9411.3	chr5	+	2791	21	incomplete-splice_match	HSD17B4	ENST00000510025.6	2628	24	7	11487	-3	745	3prime_fragment	FALSE	canonical	1	280855	junction_5	285335.7547137933	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	73	1944	95.0	7	True	NA	NA
PB.379.2	chr1	-	3620	13	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	25	-13	combination_of_known_junctions	FALSE	canonical	1	61556	junction_12	230505.26751043144	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1259	2683	45.0	-35	True	AATAAA	-12
PB.2751.30	chr12	+	2882	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	22	-381	0	381	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	35.0	0	True	NA	NA
PB.2751.31	chr12	+	5355	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	185073.32280379138	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	35.0	0	True	AATAAA	-26
PB.2751.32	chr12	+	5288	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	0	4	intron_retention	FALSE	non_canonical	0	0	junction_11	185073.32280379138	NA	16	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	40.0	0	True	AATAAA	-18
PB.2751.33	chr12	+	5145	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_11	185073.32280379138	NA	4	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	35.0	0	True	AATAAA	-25
PB.2751.34	chr12	+	6594	12	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	1	1238	intron_retention	FALSE	non_canonical	0	0	junction_11	185073.32280379138	NA	6	NA	TRUE	NA	NA	NA	C	coding	486	1461	82	1542	25.0	1	True	AATAAA	-17
PB.2751.35	chr12	+	5069	11	full-splice_match	MDM2	ENST00000539479.6	2523	11	23	-2569	1	-805	multi-exon	FALSE	canonical	1	250822	junction_1	119986.21946807059	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	82	1542	25.0	1	True	NA	NA
PB.2751.38	chr12	+	2968	2	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-1448	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-8118	False	AATAAA	-14
PB.2751.39	chr12	+	2092	2	novel_not_in_catalog	MDM2	novel	12633	11	NA	NA	-875	4	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-7545	False	AATAAA	-18
PB.2281.1	chr11	-	1964	1	novel_in_catalog	TIMM8B	novel	819	2	NA	NA	14	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	16	False	AAGAAA	-13
PB.8885.6	chr4	+	3316	12	novel_not_in_catalog	SMARCAD1	novel	5017	24	NA	NA	7	-5462	any annotated donor/acceptor	FALSE	canonical	1	689	junction_11	85047.31020413683	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	168	1757	30.0	10	True	AATAAA	-19
PB.1383.1	chr10	-	2065	4	full-splice_match	ZNF239	ENST00000374446.6	2037	4	-31	3	3	0	multi-exon	FALSE	canonical	1	5692	junction_2	7003.533441532686	NA	1	1	TRUE	NA	NA	NA	A	coding	458	1377	333	1709	15.0	-32	True	NA	NA
PB.8885.4	chr4	+	3622	24	novel_in_catalog	SMARCAD1	novel	5017	24	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	82523	junction_1	70368.59584938969	NA	2	1	TRUE	NA	NA	NA	C	coding	1026	3081	178	3258	30.0	0	True	AATATA	-21
PB.8885.5	chr4	+	3832	11	novel_not_in_catalog	SMARCAD1	novel	5017	24	NA	NA	0	-5462	any annotated donor/acceptor	FALSE	canonical	1	13715	junction_10	71597.69140279594	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	175	1764	30.0	3	True	AATAAA	-19
PB.10112.4	chr6	+	1644	7	full-splice_match	CASP8AP2	ENST00000419040.6	1280	7	12	-376	12	376	multi-exon	FALSE	canonical	1	37847	junction_1	33864.673656908155	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1458	185	1642	60.0	3	True	AAGAAA	-26
PB.7275.13	chr20	-	1723	10	full-splice_match	DSN1	ENST00000448110.6	2129	10	-36	442	1	-442	multi-exon	FALSE	canonical	1	24204	junction_9	106199.5927456096	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	150	1172	65.0	-34	True	NA	NA
PB.9098.1	chr4	+	1631	5	full-splice_match	ANKRD37	ENST00000335174.5	1141	5	-496	6	-33	-6	multi-exon	FALSE	canonical	1	347456	junction_1	44686.20867994397	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	937	1413	40.0	-17	True	ATTAAA	-10
PB.10112.3	chr6	+	1284	7	full-splice_match	CASP8AP2	ENST00000419040.6	1280	7	-2	-2	-2	2	multi-exon	FALSE	canonical	1	37847	junction_1	33864.673656908155	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1086	199	1284	65.0	-11	True	TATAAA	-26
PB.10112.2	chr6	+	4186	1	genic	CASP8AP2	novel	NA	NA	NA	NA	-14	-23284	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	123	372	2605	2976	90.0	-29	True	NA	NA
PB.11551.5	chr9	+	2891	3	novel_not_in_catalog	ALDH1B1	novel	3066	2	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	175040.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	115	1668	25.0	-62	True	AATAAA	-20
PB.6373.3	chr2	+	7176	45	novel_in_catalog	CAD	novel	7265	44	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	1	18044	junction_36	159828.04853307188	NA	0	NA	TRUE	NA	NA	NA	C	coding	2242	6729	184	6912	25.0	0	True	AATAAA	-16
PB.11698.1	chr9	+	1715	7	novel_in_catalog	NIPSNAP3B	novel	1111	6	NA	NA	-24	-157	combination_of_known_junctions	FALSE	canonical	1	6573	junction_5	16253.586158137532	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	109	726	40.0	-3	True	AATAAA	-26
PB.8284.15	chr3	-	3213	9	novel_in_catalog	CD47	novel	5225	9	NA	NA	-5	11	intron_retention	FALSE	canonical	1	20283	junction_2	422202.07048415736	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	123	1055	25.0	-2	True	AATAAA	-26
PB.3142.5	chr13	+	4152	9	incomplete-splice_match	GPALPP1	ENST00000497558.5	4294	10	-69	1339	-1	-1339	3prime_fragment	FALSE	canonical	1	80377	junction_8	81325.86897620201	NA	2	NA	TRUE	NA	NA	NA	B	coding	340	1023	105	1127	90.0	13	True	NA	NA
PB.3142.4	chr13	+	2194	9	incomplete-splice_match	GPALPP1	ENST00000497558.5	4294	10	-71	3299	-3	-2	3prime_fragment	FALSE	canonical	1	80377	junction_8	81325.86897620201	NA	0	NA	TRUE	NA	NA	NA	B	coding	340	1023	107	1129	30.0	11	True	AATAAA	-17
PB.3142.7	chr13	+	3360	10	novel_not_in_catalog	GPALPP1	novel	1393	8	NA	NA	-1	-1339	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	109036.09098701399	NA	0	NA	TRUE	NA	NA	NA	B	coding	340	1023	93	1115	90.0	25	True	NA	NA
PB.3142.6	chr13	+	3487	10	novel_not_in_catalog	GPALPP1	novel	1393	8	NA	NA	2	-1340	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	109036.09098701399	NA	1	NA	TRUE	NA	NA	NA	B	coding	340	1023	102	1124	85.0	16	True	AATGAA	-45
PB.3142.1	chr13	+	2579	10	novel_not_in_catalog	GPALPP1	novel	1393	8	NA	NA	9	1152	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	109036.09098701399	NA	0	NA	TRUE	NA	NA	NA	B	coding	340	1023	118	1140	10.0	0	True	AGTAAA	-21
PB.2295.4	chr11	+	2264	2	novel_not_in_catalog	PAFAH1B2	novel	4198	6	NA	NA	4	-14298	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	7	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-3	True	NA	NA
PB.3142.3	chr13	+	2841	10	novel_not_in_catalog	GPALPP1	novel	1393	8	NA	NA	10	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	109036.09098701399	NA	4	NA	TRUE	NA	NA	NA	B	coding	340	1023	117	1139	30.0	1	True	AATAAA	-17
PB.3142.2	chr13	+	1510	9	novel_in_catalog	GPALPP1	novel	1393	8	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	1	17204	junction_8	98370.81460950448	NA	1	NA	TRUE	NA	NA	NA	B	coding	340	1023	117	1139	30.0	1	True	AATAAA	-16
PB.6960.1	chr2	+	2416	1	novel_in_catalog	NBEAL1	novel	920	6	NA	NA	14143	-1185	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-22
PB.10029.2	chr6	+	1700	4	incomplete-splice_match	EFHC1	ENST00000637263.1	2089	9	-95	26517	12	66	3prime_fragment	FALSE	canonical	1	113720	junction_2	22053.629225141154	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	193	1029	90.0	-3473	False	TTTAAA	-38
PB.8284.14	chr3	-	6780	8	novel_in_catalog	CD47	novel	5225	9	NA	NA	-22	12	intron_retention	FALSE	canonical	1	398552	junction_7	297830.35326021095	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	140	1072	25.0	10	True	AATAAA	-27
PB.10029.1	chr6	+	2092	11	full-splice_match	EFHC1	ENST00000371068.10	6987	11	125	4770	2	0	multi-exon	FALSE	canonical	1	59015	junction_4	31880.955877921853	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	91	2013	25.0	19	True	AATACA	-22
PB.413.5	chr1	+	6459	14	full-splice_match	ZYG11B	ENST00000294353.6	8093	14	-55	1689	-13	-1689	multi-exon	FALSE	canonical	1	72727	junction_1	28220.186627901832	NA	3	NA	TRUE	NA	NA	NA	C	coding	744	2235	201	2435	100.0	1	True	NA	NA
PB.1000.1	chr1	-	4464	10	full-splice_match	PTGS2	ENST00000367468.9	4514	10	3	47	-1	-47	multi-exon	FALSE	canonical	1	259413	junction_9	85579.63320978297	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	135	1949	40.0	-2	True	AATAAA	-25
PB.1000.2	chr1	-	2571	10	full-splice_match	PTGS2	ENST00000367468.9	4514	10	4	1939	0	623	multi-exon	FALSE	canonical	1	259413	junction_9	85579.63320978297	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	134	1948	40.0	-1	True	ATTAAA	-15
PB.1025.6	chr1	-	2997	3	full-splice_match	ZNF281	ENST00000367352.3	2933	3	-64	0	0	0	multi-exon	FALSE	canonical	1	1421	junction_1	22508.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	130	2709	90.0	1	True	NA	NA
PB.9747.9	chr6	-	2381	5	novel_in_catalog	TBC1D7	novel	2229	8	NA	NA	0	1771	combination_of_known_junctions	FALSE	canonical	1	11740	junction_4	144868.3269185763	NA	4	1	TRUE	NA	NA	NA	C	coding	188	567	142	708	25.0	5	True	AATAAA	-9
PB.8468.8	chr3	-	3750	2	full-splice_match	SERP1	ENST00000491660.1	830	2	-34	-2886	-32	-513	multi-exon	FALSE	canonical	1	3613157	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-38	True	AATAAA	-17
PB.1025.5	chr1	-	2922	3	novel_not_in_catalog	ZNF281	novel	4891	2	NA	NA	22	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	23219.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	238	2634	90.0	-9	True	NA	NA
PB.11004.5	chr8	-	3812	10	novel_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	1	1212	junction_9	62786.744458750174	NA	0	NA	TRUE	NA	NA	NA	B	coding	530	1593	602	2194	30.0	-8	True	AATAAA	-19
PB.8742.10	chr4	-	4040	25	full-splice_match	RFC1	ENST00000349703.6	4859	25	-21	840	3	401	multi-exon	FALSE	canonical	1	216789	junction_24	79203.24294860904	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	132	3575	30.0	-11	True	AATAAA	-19
PB.5928.19	chr19	+	2853	12	novel_in_catalog	CD22	novel	554	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6199	junction_1	178825.58225080336	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	198	2195	40.0	-19	True	AATAAA	-21
PB.5928.18	chr19	+	3190	13	novel_not_in_catalog	CD22	novel	554	4	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	176040.52025898913	NA	2	1	TRUE	NA	NA	NA	C	coding	836	2511	22	2532	40.0	-19	True	AATAAA	-21
PB.8742.11	chr4	-	3551	25	full-splice_match	RFC1	ENST00000349703.6	4859	25	-19	1327	5	-4	multi-exon	FALSE	canonical	1	216789	junction_24	79203.24294860904	NA	1	NA	TRUE	NA	NA	NA	C	coding	1140	3420	130	3549	55.0	-9	True	NA	NA
PB.4594.1	chr16	+	2179	1	genic	AC010531.6	novel	NA	NA	NA	NA	-18	1626	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-5	True	NA	NA
PB.2300.3	chr11	+	3651	7	full-splice_match	IL10RA	ENST00000227752.7	3695	7	46	-2	0	2	multi-exon	FALSE	canonical	1	64335	junction_1	73816.09343365142	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	75	1811	35.0	0	True	AATAAA	-17
PB.5928.11	chr19	+	3577	15	novel_not_in_catalog	CD22	novel	554	4	NA	NA	-191	0	any annotated donor/acceptor	FALSE	canonical	1	2107	junction_13	205430.12766423248	NA	15	3	TRUE	NA	NA	NA	C	coding	777	2334	367	2700	40.0	0	True	AATAAA	-21
PB.2300.1	chr11	+	3962	7	full-splice_match	IL10RA	ENST00000530761.5	2271	7	-8	-1683	-8	2	multi-exon	TRUE	canonical	1	53108	junction_1	76914.05489606927	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	446	2122	35.0	-3668	False	AATAAA	-17
PB.5928.17	chr19	+	3373	14	novel_in_catalog	CD22	novel	554	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4243	junction_1	192466.84717329475	NA	1	1	TRUE	NA	NA	NA	C	coding	897	2694	22	2715	40.0	-19	True	AATAAA	-21
PB.5928.16	chr19	+	3102	14	novel_not_in_catalog	CD22	novel	554	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	7601	junction_7	201537.66102207432	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	87	2444	40.0	-20	True	AATAAA	-21
PB.5928.15	chr19	+	3257	14	novel_not_in_catalog	CD22	novel	554	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	187161.90398755972	NA	5	1	TRUE	NA	NA	NA	C	coding	858	2577	23	2599	40.0	-20	True	AATAAA	-21
PB.5928.14	chr19	+	3263	14	full-splice_match	CD22	ENST00000085219.9	3268	14	5	0	-3	0	multi-exon	FALSE	canonical	1	89447	junction_2	174133.65241431058	NA	95	6	TRUE	NA	NA	NA	C	coding	847	2544	62	2605	40.0	5	True	AATAAA	-21
PB.9487.3	chr5	-	3006	8	full-splice_match	DNAJC18	ENST00000302060.9	5103	8	1	2096	1	1756	multi-exon	FALSE	canonical	1	115124	junction_2	7819.783654818288	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	81	1157	70.0	-25	True	NA	NA
PB.9487.2	chr5	-	3567	8	full-splice_match	DNAJC18	ENST00000302060.9	5103	8	16	1520	-9	-1520	multi-exon	FALSE	canonical	1	115124	junction_2	7819.783654818288	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	66	1142	25.0	-10	True	AATAGA	-23
PB.9487.1	chr5	-	4518	8	full-splice_match	DNAJC18	ENST00000302060.9	5103	8	1	584	1	-584	multi-exon	FALSE	canonical	1	115124	junction_2	7819.783654818288	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	81	1157	90.0	-25	True	NA	NA
PB.8742.13	chr4	-	1643	13	incomplete-splice_match	RFC1	ENST00000349703.6	4859	25	-11	21543	0	-2365	3prime_fragment	FALSE	canonical	1	216789	junction_12	62629.42723600242	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1521	122	1642	65.0	-1	True	AAGAAA	-26
PB.11980.3	chrX	-	2965	6	novel_not_in_catalog	PIGA	novel	3652	6	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	137	junction_5	38190.176857406674	NA	2	1	TRUE	NA	NA	NA	C	coding	169	510	408	917	20.0	-3	True	AATAAA	-21
PB.11980.2	chrX	-	3247	6	full-splice_match	PIGA	ENST00000635598.1	3246	6	-2	1	-2	-1	multi-exon	FALSE	canonical	1	12977	junction_4	36542.705884485345	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	690	1199	20.0	-34	True	AATAAA	-21
PB.11980.1	chrX	-	3590	6	full-splice_match	PIGA	ENST00000333590.5	3652	6	55	7	-2	-1	multi-exon	FALSE	canonical	1	29800	junction_5	30622.156818878713	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	88	1542	20.0	-3	True	AATAAA	-21
PB.3941.1	chr15	-	1784	10	full-splice_match	RPL4	ENST00000307961.10	2769	10	37	948	0	357	multi-exon	FALSE	canonical	1	1371308	junction_4	3034677.157309627	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	57	1340	25.0	3	True	AGTAAA	-15
PB.3941.6	chr15	-	1999	8	full-splice_match	RPL4	ENST00000567229.5	2003	8	0	4	0	-1	multi-exon	FALSE	canonical	1	1748373	junction_7	2992532.621008595	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	1482	1916	25.0	3	True	AATAAA	-23
PB.11980.6	chrX	-	2949	6	full-splice_match	PIGA	ENST00000634640.1	854	6	11	-2106	1	-2	multi-exon	FALSE	canonical	1	16822	junction_4	35710.782782795446	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	393	902	15.0	-21	True	AATAAA	-20
PB.11980.5	chrX	-	3309	7	novel_not_in_catalog	PIGA	novel	3652	6	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	171	junction_5	40735.172757158594	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	753	1262	15.0	-35	True	AATAAA	-20
PB.11980.4	chrX	-	2813	5	full-splice_match	PIGA	ENST00000634582.1	965	5	19	-1867	-2	-1	multi-exon	FALSE	canonical	1	1519	junction_4	42233.26838154371	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	13	765	20.0	-3	True	AATAAA	-21
PB.6381.8	chr2	+	3907	13	novel_in_catalog	ZNF512	novel	3543	13	NA	NA	11	-3	intron_retention	FALSE	canonical	1	87842	junction_1	79161.7331621981	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	811	2277	25.0	9	True	AATAAA	-11
PB.5446.8	chr18	-	4507	2	full-splice_match	AC011815.1	ENST00000586922.2	4382	2	-20	-105	-20	105	multi-exon	TRUE	canonical	1	2912	junction_1	0.0	NA	14	1	TRUE	NA	NA	NA	A	coding	211	636	180	815	35.0	0	True	NA	NA
PB.5446.9	chr18	-	2331	1	novel_in_catalog	ZSCAN30	novel	3439	2	NA	NA	0	1454	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.5446.6	chr18	-	5758	2	novel_in_catalog	ZSCAN30	novel	3439	2	NA	NA	-6	9794	no_combination_of_known_junctions	FALSE	canonical	1	3502	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	211	636	220	855	20.0	7	True	NA	NA
PB.5446.7	chr18	-	4582	2	novel_in_catalog	ZSCAN30	novel	3439	2	NA	NA	-4	8583	no_combination_of_known_junctions	FALSE	canonical	1	3502	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	255	890	35.0	-28	True	NA	NA
PB.5446.4	chr18	-	3095	1	full-splice_match	ZSCAN30	ENST00000590777.1	2028	1	461	-1528	461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	211	636	76	711	40.0	NA	False	AATAAA	-12
PB.5446.5	chr18	-	3296	4	novel_in_catalog	ZSCAN30	novel	3439	2	NA	NA	-1	-74	combination_of_known_junctions	FALSE	canonical	1	17119	junction_3	27535.05964321769	NA	3	NA	TRUE	NA	NA	NA	C	coding	221	666	220	885	60.0	-25	True	NA	NA
PB.5446.2	chr18	-	4299	5	novel_not_in_catalog	ZSCAN30	novel	3439	2	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	972	junction_4	12049.532708781699	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	860	1915	40.0	-1	True	AATAAA	-12
PB.5446.3	chr18	-	4078	4	novel_in_catalog	ZSCAN30	novel	3439	2	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	17119	junction_3	25579.11544383208	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	210	1694	40.0	-15	True	AATAAA	-12
PB.5446.1	chr18	-	4369	5	novel_in_catalog	ZSCAN30	novel	3439	2	NA	NA	-28	0	no_combination_of_known_junctions	FALSE	canonical	1	1227	junction_4	30384.183849290737	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	501	1985	40.0	-52	False	AATAAA	-12
PB.1226.21	chr1	-	2338	17	incomplete-splice_match	HEATR1	ENST00000366581.6	6538	44	-21	34393	-21	10708	3prime_fragment	FALSE	canonical	1	193779	junction_8	48171.169606414995	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2202	137	2338	65.0	36	False	AAGAAA	-42
PB.6894.18	chr2	+	2514	13	novel_not_in_catalog	GULP1	novel	2643	13	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	87644.43667867471	NA	7	2	TRUE	NA	NA	NA	C	coding	335	1008	459	1466	85.0	-2	True	NA	NA
PB.3913.10	chr15	+	2358	16	full-splice_match	USP3	ENST00000558157.5	2439	16	92	-11	-7	11	multi-exon	FALSE	canonical	1	29074	junction_1	114950.52753393039	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	233	1729	45.0	-7249	False	AATAAA	-28
PB.8553.10	chr3	+	6576	31	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	canonical	1	2400	junction_24	69719.24131694205	NA	3	NA	TRUE	NA	NA	NA	C	coding	1143	3432	206	3637	5.0	2	True	AATAAA	-13
PB.298.2	chr1	-	2691	5	novel_in_catalog	C1orf109	novel	2355	5	NA	NA	-9	-7	combination_of_known_junctions	FALSE	canonical	1	14051	junction_4	82208.52523461299	NA	1	1	TRUE	NA	NA	NA	B	coding	203	612	535	1146	50.0	-13	True	AATAAA	-5
PB.5499.1	chr18	+	5624	10	novel_in_catalog	ZNF532	novel	6696	11	NA	NA	-5	9	combination_of_known_junctions	FALSE	canonical	1	9966	junction_1	58171.90958882024	NA	8	NA	TRUE	NA	NA	NA	C	coding	1299	3900	238	4137	25.0	6	True	AATAAA	-23
PB.298.1	chr1	-	2439	6	novel_not_in_catalog	C1orf109	novel	2355	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	285	junction_5	84194.41936138048	NA	1	NA	TRUE	NA	NA	NA	B	coding	265	798	90	887	30.0	-1	True	AATAAA	-12
PB.3955.1	chr15	-	4520	19	full-splice_match	UACA	ENST00000322954.10	6939	19	39	2380	39	0	multi-exon	FALSE	canonical	1	103249	junction_18	78208.38621235806	NA	0	NA	TRUE	NA	NA	NA	C	coding	1416	4251	148	4398	20.0	3	True	AATAAA	-15
PB.9704.2	chr6	-	1704	4	full-splice_match	TUBB2B	ENST00000259818.7	2020	4	79	237	79	-215	multi-exon	FALSE	canonical	1	1296217	junction_2	116753.6844215205	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	114	1451	10.0	-4	True	CATAAA	-13
PB.3955.3	chr15	-	2811	16	incomplete-splice_match	UACA	ENST00000322954.10	6939	19	33	13472	33	892	3prime_fragment	FALSE	canonical	1	103249	junction_15	47445.78461425443	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2658	154	2811	60.0	-3	True	NA	NA
PB.3955.2	chr15	-	3188	16	incomplete-splice_match	UACA	ENST00000322954.10	6939	19	67	13061	67	1303	3prime_fragment	FALSE	canonical	1	103249	junction_15	47445.78461425443	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3069	120	3188	70.0	-2	True	NA	NA
PB.3955.5	chr15	-	2057	15	novel_in_catalog	UACA	novel	6939	19	NA	NA	36	174	combination_of_known_junctions	FALSE	canonical	1	28414	junction_4	74071.38441726196	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	151	2055	60.0	0	True	AATGAA	-15
PB.3955.4	chr15	-	2091	16	incomplete-splice_match	UACA	ENST00000322954.10	6939	19	35	14190	35	174	3prime_fragment	FALSE	canonical	1	103249	junction_15	47445.78461425443	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1938	152	2089	60.0	-1	True	AATGAA	-15
PB.3955.7	chr15	-	1946	16	incomplete-splice_match	UACA	ENST00000322954.10	6939	19	45	14325	45	39	3prime_fragment	FALSE	canonical	1	103249	junction_15	47445.78461425443	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1803	142	1944	60.0	9	True	AAGAAA	-44
PB.3955.6	chr15	-	2287	15	full-splice_match	UACA	ENST00000558758.5	2060	15	-58	-169	-31	169	multi-exon	FALSE	canonical	1	27298	junction_14	85050.30395862252	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1860	428	2287	65.0	8503	False	AATGAA	-10
PB.9039.1	chr4	-	2896	8	full-splice_match	CTSO	ENST00000433477.3	2954	8	50	8	50	-8	multi-exon	FALSE	canonical	1	73483	junction_7	38276.908054388114	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	21	986	45.0	-2	True	AATAAA	-25
PB.9039.2	chr4	-	2840	8	novel_not_in_catalog	CTSO	novel	2954	8	NA	NA	35	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	61674.37606312293	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	666	265	930	45.0	-17	True	AATAAA	-25
PB.9039.3	chr4	-	2449	8	full-splice_match	CTSO	ENST00000433477.3	2954	8	51	454	51	-454	multi-exon	FALSE	canonical	1	73483	junction_7	38276.908054388114	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	20	985	65.0	-1	True	NA	NA
PB.7500.19	chr21	-	3114	21	novel_in_catalog	GART	novel	3341	22	NA	NA	2	-34	no_combination_of_known_junctions	FALSE	canonical	1	553	junction_12	222153.4755284902	NA	1	1	TRUE	NA	NA	NA	C	coding	955	2868	90	2957	50.0	-1	True	AATAAA	-13
PB.8284.10	chr3	-	2601	8	novel_in_catalog	CD47	novel	5225	9	NA	NA	-32	1361	no_combination_of_known_junctions	FALSE	canonical	1	182986	junction_1	409495.2918988776	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	150	1031	15.0	0	True	NA	NA
PB.7500.18	chr21	-	3098	21	novel_in_catalog	GART	novel	3341	22	NA	NA	-3	-34	no_combination_of_known_junctions	FALSE	canonical	1	4710	junction_20	220852.44308290433	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	248	2941	50.0	-6	True	AATAAA	-13
PB.4367.1	chr16	-	1452	11	incomplete-splice_match	SEPT1	ENST00000321367.7	1592	12	273	3	0	1	5prime_fragment	FALSE	canonical	1	165133	junction_10	94904.43455687411	NA	0	NA	TRUE	NA	NA	NA	B	coding	372	1119	36	1154	10.0	-17	True	AATAAA	-20
PB.11597.15	chr9	+	5956	25	novel_not_in_catalog	SMC5	novel	5980	25	NA	NA	42	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	86700.16711260808	NA	3	1	TRUE	NA	NA	NA	C	coding	1112	3339	76	3414	15.0	26	True	AATAAA	-18
PB.4367.3	chr16	-	2639	9	incomplete-splice_match	SEPT1	ENST00000563957.6	2738	10	236	-1	0	1	5prime_fragment	FALSE	canonical	1	165133	junction_8	103786.36488231186	NA	1	NA	TRUE	NA	NA	NA	B	coding	172	519	36	554	10.0	-17	True	AATAAA	-20
PB.4367.2	chr16	-	2802	9	novel_in_catalog	SEPT1	novel	1592	12	NA	NA	3	1	intron_retention	FALSE	canonical	1	25457	junction_4	150477.7038151645	NA	3	NA	TRUE	NA	NA	NA	B	coding	172	519	33	551	10.0	-14	True	AATAAA	-20
PB.8169.1	chr3	+	5299	1	genic	SMIM4	novel	NA	NA	NA	NA	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	100	303	3026	3328	0.0	-135	False	AATAAA	-14
PB.8482.2	chr3	-	4058	5	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	4	-63471	intron_retention	FALSE	canonical	1	192471	junction_4	39397.022285954554	NA	1	NA	TRUE	NA	NA	NA	B	coding	383	1152	442	1593	30.0	17	False	AATAAA	-30
PB.1173.6	chr1	+	2019	6	novel_not_in_catalog	SNAP47	novel	792	3	NA	NA	-1	-1	any annotated donor/acceptor	TRUE	canonical	1	2026	junction_2	207915.26141522176	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	208	1467	25.0	0	True	AATAAA	-17
PB.465.44	chr1	-	2518	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-30	994	-1	353	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	117	1343	25.0	1	True	TATAAA	-19
PB.145.3	chr1	-	4110	13	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	2	-8	intron_retention	FALSE	canonical	1	80866	junction_4	427093.1135645283	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	228	1247	30.0	-15	True	AATAAA	-29
PB.8169.2	chr3	+	3920	1	novel_in_catalog	SMIM4	novel	314	3	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	100	303	3014	3316	15.0	0	True	AATAAA	-16
PB.9497.1	chr5	+	2671	3	full-splice_match	SLC35A4	ENST00000612662.1	2657	3	-13	-1	-6	1	multi-exon	FALSE	canonical	1	330258	junction_1	237652.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	763	1716	10.0	-6	True	AATAAA	-39
PB.9497.2	chr5	+	2581	4	novel_not_in_catalog	SLC35A4	novel	3041	3	NA	NA	-6	1	any annotated donor/acceptor	FALSE	canonical	1	5514	junction_3	328540.4355725825	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	673	1626	10.0	-6	True	AATAAA	-39
PB.9497.3	chr5	+	3685	2	full-splice_match	SLC35A4	ENST00000514199.1	3617	2	-66	-2	-3	-1	multi-exon	FALSE	canonical	1	805562	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	1774	2727	5.0	-3	True	AATAAA	-42
PB.145.1	chr1	-	3758	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	10	-31	intron_retention	FALSE	canonical	1	187223	junction_11	352437.21360286116	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	127	1674	60.0	4	True	NA	NA
PB.8482.9	chr3	-	3244	5	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	0	-64289	intron_retention	FALSE	canonical	1	192471	junction_4	39397.022285954554	NA	0	NA	TRUE	NA	NA	NA	B	coding	383	1152	446	1597	25.0	13	False	AATAAA	-19
PB.8940.1	chr4	-	2582	1	full-splice_match	AC109347.1	ENST00000562919.1	2036	1	-550	4	-550	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	3	True	NA	NA
PB.9033.15	chr4	+	4709	33	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	11	-3	any annotated donor/acceptor	FALSE	canonical	1	6273	junction_16	119990.247482201	NA	0	NA	TRUE	NA	NA	NA	C	coding	1512	4539	39	4577	15.0	0	True	AATAAA	-11
PB.9033.16	chr4	+	3200	25	incomplete-splice_match	TMEM131L	ENST00000409959.7	5017	35	11	32537	11	560	3prime_fragment	FALSE	canonical	1	123366	junction_6	69425.86492077909	NA	1	NA	TRUE	NA	NA	NA	C	coding	1054	3162	39	3200	65.0	0	True	CATAAA	-44
PB.9033.17	chr4	+	5009	35	full-splice_match	TMEM131L	ENST00000409959.7	5017	35	12	-4	12	4	multi-exon	FALSE	canonical	1	123366	junction_6	103443.61901060522	NA	2	NA	TRUE	NA	NA	NA	C	coding	1610	4833	38	4870	10.0	1	True	AATAAA	-18
PB.9033.10	chr4	+	4874	34	novel_in_catalog	TMEM131L	novel	5017	35	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	2750	junction_33	91041.74143596603	NA	0	NA	TRUE	NA	NA	NA	C	coding	1499	4500	50	4549	15.0	-11	True	AATAAA	-11
PB.7265.1	chr20	-	4409	18	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-1	0	intron_retention	FALSE	canonical	1	34065	junction_15	520381.93432878854	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	2417	3538	25.0	39	True	AATAAA	-18
PB.9033.12	chr4	+	4258	7	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	5	3192	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	53584.48448556106	NA	5	1	TRUE	NA	NA	NA	C	coding	98	297	2	298	70.0	-6	True	TTTAAA	-13
PB.7183.1	chr20	+	1551	7	full-splice_match	SNRPB2	ENST00000377943.9	1588	7	35	2	12	-2	multi-exon	FALSE	canonical	1	233904	junction_2	290521.9220062786	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	105	782	20.0	-33	True	AATAAA	-15
PB.504.7	chr1	-	3392	15	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	201	junction_13	33747.526607478205	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	675	2291	25.0	-5	True	AATAAA	-18
PB.8744.1	chr4	+	1647	11	full-splice_match	LIAS	ENST00000640888.1	4041	11	473	1921	2	1	multi-exon	TRUE	canonical	1	105229	junction_4	30098.232811246577	NA	0	NA	TRUE	NA	NA	NA	A	coding	372	1119	59	1177	15.0	0	True	AATAAA	-25
PB.504.5	chr1	-	2885	13	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	1081	junction_12	30794.886342608355	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	599	1783	20.0	-6	True	AATAAA	-19
PB.504.4	chr1	-	3006	14	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	821	junction_2	29954.1176391237	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	243	1904	20.0	-6	True	AATAAA	-19
PB.504.3	chr1	-	3143	15	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5312	junction_13	32927.065745324755	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	425	2041	20.0	-5	True	AATAAA	-19
PB.7183.2	chr20	+	2314	7	full-splice_match	SNRPB2	ENST00000377943.9	1588	7	61	-787	-7	0	multi-exon	FALSE	canonical	1	233904	junction_2	290521.9220062786	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	79	756	25.0	-7	True	NA	NA
PB.8284.12	chr3	-	1342	11	full-splice_match	CD47	ENST00000361309.5	1285	11	-39	-18	-28	16	multi-exon	FALSE	canonical	1	240079	junction_2	426322.7252701878	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	146	1117	15.0	4	True	AATAAA	-31
PB.4708.12	chr17	-	1870	6	novel_in_catalog	DERL2	novel	4209	7	NA	NA	11	17	intron_retention	FALSE	canonical	1	338339	junction_5	97678.84903621663	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	1179	1478	20.0	610	False	AATAAA	-26
PB.4708.10	chr17	-	2094	5	novel_in_catalog	DERL2	novel	4209	7	NA	NA	-5	17	intron_retention	FALSE	canonical	1	338339	junction_4	50077.295396716465	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	28	441	20.0	-15	True	AATAAA	-26
PB.4708.11	chr17	-	2011	7	novel_not_in_catalog	DERL2	novel	4209	7	NA	NA	-12	17	intron_retention	FALSE	canonical	1	26488	junction_1	216592.05282082464	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	35	448	20.0	621	False	AATAAA	-26
PB.10240.3	chr6	-	6422	7	full-splice_match	NHSL1	ENST00000427025.6	7500	7	-29	1107	-29	-579	multi-exon	FALSE	canonical	1	10903	junction_6	37685.230873645974	NA	3	NA	TRUE	NA	NA	NA	C	coding	1610	4833	659	5491	25.0	-1	True	AATAAA	-38
PB.10240.2	chr6	-	7511	7	full-splice_match	NHSL1	ENST00000427025.6	7500	7	-17	6	-17	-6	multi-exon	FALSE	canonical	1	10903	junction_6	37685.230873645974	NA	11	NA	TRUE	NA	NA	NA	C	coding	1610	4833	647	5479	45.0	11	True	AATAAA	-11
PB.9911.24	chr6	+	2811	9	novel_not_in_catalog	BRD2	novel	4894	13	NA	NA	-18	22	intron_retention	FALSE	non_canonical	0	0	junction_8	667422.9393871883	NA	1	1	TRUE	NA	NA	NA	C	coding	506	1521	701	2221	30.0	1	True	AATAAA	-14
PB.9911.22	chr6	+	3190	13	novel_not_in_catalog	BRD2	novel	4894	13	NA	NA	-18	22	intron_retention	FALSE	non_canonical	0	0	junction_12	655523.3348793839	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	701	3172	30.0	1	True	AATAAA	-14
PB.10240.6	chr6	-	2130	4	full-splice_match	NHSL1	ENST00000491526.6	506	4	-611	-1013	-611	738	multi-exon	FALSE	canonical	1	14722	junction_3	38072.90147715155	NA	7	1	TRUE	NA	NA	NA	C	coding	258	777	419	1195	90.0	-7	True	NA	NA
PB.10240.5	chr6	-	3541	4	full-splice_match	NHSL1	ENST00000491526.6	506	4	-564	-2471	-564	2196	multi-exon	FALSE	canonical	1	14722	junction_3	38072.90147715155	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	372	1148	80.0	-20	True	NA	NA
PB.9911.21	chr6	+	2939	9	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-19	-9	intron_retention	FALSE	canonical	1	362360	junction_3	722714.205695522	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	435	2505	2939	75.0	0	True	NA	NA
PB.1252.3	chr1	+	2478	6	full-splice_match	TRIM58	ENST00000366481.3	3225	6	116	631	116	-631	multi-exon	FALSE	canonical	1	139727	junction_5	119888.72764259366	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	365	1393	70.0	0	True	NA	NA
PB.9090.1	chr4	-	3471	1	genic	LINC02427	novel	NA	NA	NA	NA	-240	-27406	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	65	198	167	364	50.0	-277	False	AATAAA	-6
PB.5549.11	chr19	+	2784	11	incomplete-splice_match	PTBP1	ENST00000350092.8	3069	14	4883	1	-100	-1	5prime_fragment	FALSE	canonical	1	1080248	junction_1	638469.2587640301	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	16	1389	5.0	-7556	False	ATTAAA	-17
PB.157.4	chr1	-	2798	10	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	1	271	combination_of_known_junctions	FALSE	canonical	1	118260	junction_8	501768.801635761	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	258	1856	20.0	0	True	ATTAAA	-22
PB.1252.2	chr1	+	3196	6	full-splice_match	TRIM58	ENST00000366481.3	3225	6	-14	43	-14	-43	multi-exon	FALSE	canonical	1	139727	junction_5	119888.72764259366	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	63	1523	80.0	-2	True	NA	NA
PB.6986.2	chr2	+	1192	5	full-splice_match	SPAG16	ENST00000432529.6	1250	5	45	13	0	-13	multi-exon	FALSE	canonical	1	174467	junction_1	62142.56660041891	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	48	599	55.0	-43	True	NA	NA
PB.6986.3	chr2	+	2727	5	full-splice_match	SPAG16	ENST00000432529.6	1250	5	45	-1522	0	1522	multi-exon	FALSE	canonical	1	174467	junction_1	62142.56660041891	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	48	599	10.0	-43	True	AATATA	-14
PB.6986.1	chr2	+	2828	9	novel_not_in_catalog	SPAG16	novel	1059	10	NA	NA	0	-4313	any annotated donor/acceptor	TRUE	canonical	1	3387	junction_8	125976.84338196594	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	69	1124	10.0	-64	True	AATAAA	-33
PB.9035.12	chr4	-	1668	15	full-splice_match	PLRG1	ENST00000302078.9	1673	15	4	1	-1	-1	multi-exon	FALSE	canonical	1	18750	junction_11	212909.92530929405	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	86	1603	30.0	2	True	ATTAAA	-20
PB.9035.13	chr4	-	1704	15	full-splice_match	PLRG1	ENST00000499023.6	3351	15	32	1615	-3	-2	multi-exon	FALSE	canonical	1	537600	junction_8	126245.99088993127	NA	4	NA	TRUE	NA	NA	NA	C	coding	514	1545	96	1640	30.0	-8	True	ATTAAA	-19
PB.9035.10	chr4	-	1785	15	full-splice_match	PLRG1	ENST00000302078.9	1673	15	-4	-108	-1	10	multi-exon	FALSE	canonical	1	18750	junction_11	212909.92530929405	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	94	1611	10.0	-6	True	AATAAA	-17
PB.9035.11	chr4	-	1674	15	novel_in_catalog	PLRG1	novel	3351	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	5398	junction_3	216614.15453493028	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	89	1243	25.0	-1	True	ATTAAA	-22
PB.5951.7	chr19	-	2244	4	full-splice_match	ZNF529	ENST00000587286.1	568	4	-16	-1660	-2	-483	multi-exon	FALSE	canonical	1	347	junction_1	11875.763077237043	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	NA	NA
PB.5951.6	chr19	-	2034	8	novel_not_in_catalog	ZNF529	novel	395	2	NA	NA	-16	1735	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	31443.725246015918	NA	3	1	TRUE	NA	NA	NA	C	coding	291	876	723	1598	25.0	23	True	NA	NA
PB.5951.5	chr19	-	2635	1	novel_in_catalog	ZNF529	novel	395	2	NA	NA	498	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	ATTAAA	-12
PB.5951.4	chr19	-	4367	5	full-splice_match	ZNF529	ENST00000585960.5	535	5	0	-3832	0	-10	multi-exon	FALSE	canonical	1	4652	junction_3	29295.95990384169	NA	9	NA	TRUE	NA	NA	NA	C	coding	545	1638	260	1897	40.0	-1	True	ATTAAA	-12
PB.5951.3	chr19	-	4287	4	novel_in_catalog	ZNF529	novel	395	2	NA	NA	10	-10	intron_retention	FALSE	canonical	1	1768	junction_3	34096.67839475798	NA	3	NA	TRUE	NA	NA	NA	C	coding	545	1638	180	1817	40.0	13	True	ATTAAA	-12
PB.5951.2	chr19	-	4588	7	novel_not_in_catalog	ZNF529	novel	395	2	NA	NA	-3	-6	intron_retention	FALSE	canonical	1	2220	junction_2	29660.43545982875	NA	5	NA	TRUE	NA	NA	NA	C	coding	458	1377	738	2114	25.0	0	True	ATTAAA	-16
PB.5951.1	chr19	-	4359	5	full-splice_match	ZNF529	ENST00000591340.5	4331	5	-34	6	2	-6	multi-exon	FALSE	canonical	1	41495	junction_1	16351.877344436632	NA	2	NA	TRUE	NA	NA	NA	C	coding	563	1692	194	1885	25.0	5	True	ATTAAA	-16
PB.10459.35	chr7	+	2239	15	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	377	junction_1	486924.7809818938	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	228	2204	90.0	-11	True	AATATA	-11
PB.10459.34	chr7	+	2332	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	387142.4938464145	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	108	2297	90.0	-12	True	AATATA	-11
PB.1717.1	chr10	+	2100	9	full-splice_match	PPP2R2D	ENST00000455566.5	5738	9	351	3287	-36	-8	multi-exon	FALSE	canonical	0	0	junction_1	147201.84031373385	NA	1	NA	TRUE	NA	NA	NA	A	coding	453	1362	155	1516	35.0	NA	False	AATAAA	-31
PB.10459.36	chr7	+	3071	17	full-splice_match	TAX1BP1	ENST00000265393.10	2478	17	77	-670	3	-214	multi-exon	FALSE	canonical	1	1075000	junction_1	227355.73423574562	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	106	2349	20.0	-10	True	ATTAAA	-10
PB.10459.31	chr7	+	2999	18	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	0	124	combination_of_known_junctions	FALSE	canonical	1	15092	junction_17	440256.1924610932	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	109	2454	45.0	-13	True	TATAAA	-29
PB.10459.30	chr7	+	3383	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	22887	junction_14	383921.94040182483	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	109	2448	30.0	-13	True	ATTAAA	-28
PB.10459.33	chr7	+	2512	17	full-splice_match	TAX1BP1	ENST00000396319.6	2892	17	-19	399	1	0	multi-exon	FALSE	canonical	1	242700	junction_14	342112.0649207791	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	108	2477	90.0	-12	True	AATATA	-11
PB.10459.32	chr7	+	2784	17	full-splice_match	TAX1BP1	ENST00000265393.10	2478	17	75	-381	1	-1	multi-exon	FALSE	canonical	1	1075000	junction_1	227355.73423574562	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	108	2351	20.0	-12	True	AATAAA	-19
PB.1987.2	chr11	-	3369	1	novel_in_catalog	AHNAK	novel	701	3	NA	NA	-1915	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	807	2424	106	2529	10.0	6561	False	AATAAA	-17
PB.1987.3	chr11	-	5053	1	novel_in_catalog	AHNAK	novel	701	3	NA	NA	-3600	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	1382	4149	66	4214	10.0	4876	False	AATAAA	-16
PB.1987.1	chr11	-	6066	1	novel_in_catalog	AHNAK	novel	701	3	NA	NA	-4611	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	1703	5112	114	5225	10.0	9976	False	AATAAA	-18
PB.2749.9	chr12	+	1510	11	incomplete-splice_match	NUP107	ENST00000378905.6	2859	26	36	28422	-5	-108	3prime_fragment	FALSE	canonical	1	290982	junction_5	59890.93206730047	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	80	1063	65.0	0	True	AATGAA	-35
PB.2749.8	chr12	+	2928	28	full-splice_match	NUP107	ENST00000229179.8	6457	28	251	3278	-7	0	multi-exon	FALSE	canonical	1	290982	junction_5	112380.95608401208	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2778	82	2859	20.0	-2	True	AATAAA	-18
PB.2749.7	chr12	+	2826	26	novel_not_in_catalog	NUP107	novel	6457	28	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	150100.35623694435	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	126	2603	20.0	-5	True	AATAAA	-33
PB.2749.6	chr12	+	3014	27	novel_in_catalog	NUP107	novel	6457	28	NA	NA	10	-3	no_combination_of_known_junctions	FALSE	canonical	1	8922	junction_8	144499.60641610165	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	86	2791	20.0	-6	True	AATAAA	-33
PB.2749.5	chr12	+	2860	27	novel_in_catalog	NUP107	novel	6457	28	NA	NA	9	-1	no_combination_of_known_junctions	FALSE	canonical	1	8922	junction_8	144499.60641610165	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	87	2792	20.0	-7	True	AATAAA	-17
PB.2749.4	chr12	+	3088	28	full-splice_match	NUP107	ENST00000229179.8	6457	28	245	3124	8	-3	multi-exon	FALSE	canonical	1	290982	junction_5	112380.95608401208	NA	1	NA	TRUE	NA	NA	NA	C	coding	925	2778	88	2865	20.0	-8	True	AATAAA	-33
PB.2749.3	chr12	+	2458	25	incomplete-splice_match	NUP107	ENST00000229179.8	6457	28	244	10994	7	1290	3prime_fragment	FALSE	canonical	1	290982	junction_5	99484.60341928824	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2370	89	2458	65.0	-9	True	NA	NA
PB.2749.2	chr12	+	3072	28	novel_not_in_catalog	NUP107	novel	6457	28	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	9094	junction_23	141082.47077184735	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2751	92	2842	10.0	-12	True	AATAAA	-40
PB.2749.1	chr12	+	4908	27	novel_in_catalog	NUP107	novel	6457	28	NA	NA	3	-6	intron_retention	TRUE	canonical	1	290982	junction_5	113506.8143071911	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	2847	4688	25.0	-13	True	AATAAA	-30
PB.5272.6	chr17	+	2397	3	full-splice_match	SNHG16	ENST00000493536.5	2424	3	33	-6	11	1	multi-exon	FALSE	canonical	1	5346	junction_2	390740.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	AATAAA	-20
PB.4944.2	chr17	-	3168	14	novel_not_in_catalog	CACNB1	novel	3742	14	NA	NA	35	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	68702.85293500034	NA	0	NA	TRUE	NA	NA	NA	B	coding	370	1113	837	1949	10.0	1	True	TATAAA	-20
PB.10931.1	chr7	+	4079	23	full-splice_match	SLC4A2	ENST00000413384.6	4142	23	61	2	40	1	multi-exon	FALSE	canonical	1	171810	junction_5	214710.18675227862	NA	0	NA	TRUE	NA	NA	NA	C	coding	1241	3726	196	3921	5.0	40	True	AGTAAA	-18
PB.10931.2	chr7	+	4225	23	novel_in_catalog	SLC4A2	novel	571	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	14128	junction_1	244845.584625754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1241	3726	341	4066	5.0	-2	True	AGTAAA	-19
PB.4944.1	chr17	-	3704	14	novel_not_in_catalog	CACNB1	novel	3742	14	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	77985.18764005404	NA	2	NA	TRUE	NA	NA	NA	B	coding	370	1113	1373	2485	10.0	0	True	TATAAA	-20
PB.6448.2	chr2	+	4794	16	full-splice_match	EPAS1	ENST00000263734.4	5166	16	364	8	2	-1	multi-exon	FALSE	canonical	1	519898	junction_1	150198.66925352198	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	147	2759	10.0	0	True	ATTAAA	-13
PB.5476.1	chr18	+	4139	10	full-splice_match	LIPG	ENST00000261292.8	10441	10	26	6276	-3	0	multi-exon	FALSE	canonical	1	73218	junction_4	10146.234752573044	NA	0	NA	TRUE	NA	NA	NA	A	coding	500	1503	253	1755	35.0	0	True	AATAAA	-17
PB.7099.4	chr2	+	2716	9	novel_not_in_catalog	GPC1	novel	3713	9	NA	NA	-14	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	282707.3312154893	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	263	1771	20.0	-33	True	AATAAA	-13
PB.8305.9	chr3	-	2354	5	full-splice_match	NAA50	ENST00000240922.7	6135	5	33	3748	8	107	multi-exon	FALSE	canonical	1	885142	junction_4	202105.9816321625	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	293	802	30.0	-1	True	TATAAA	-18
PB.7110.41	chr2	+	3161	13	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	5947	junction_9	939516.4663406318	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	88	1074	25.0	-33	True	AATAAA	-20
PB.7099.1	chr2	+	2042	9	full-splice_match	GPC1	ENST00000264039.6	3713	9	-43	1714	-43	6	multi-exon	FALSE	canonical	1	539317	junction_1	145309.00729974554	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	292	1968	15.0	2	True	AATACA	-22
PB.7099.2	chr2	+	2317	10	novel_not_in_catalog	GPC1	novel	3713	9	NA	NA	-23	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	267591.64799372945	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	272	2272	20.0	-205	False	AATAAA	-14
PB.8305.8	chr3	-	2916	5	full-splice_match	NAA50	ENST00000240922.7	6135	5	1	3218	1	637	multi-exon	FALSE	canonical	1	885142	junction_4	202105.9816321625	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	325	834	15.0	8382	False	ATTAAA	-13
PB.8498.18	chr3	-	2599	21	full-splice_match	IFT80	ENST00000496589.5	3073	21	48	426	-2	-187	multi-exon	FALSE	canonical	1	18522	junction_19	50811.85742646592	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1842	758	2599	50.0	-10	True	AATAGA	-20
PB.8498.19	chr3	-	2541	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50587	-31152	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	51731.799790962126	NA	23	1	TRUE	NA	NA	NA	B	coding	741	2223	319	2541	50.0	285	False	AATAGA	-20
PB.3077.1	chr13	-	2676	1	antisense	novelGene_PAN3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.6000.1	chr19	-	7425	6	full-splice_match	ZNF780A	ENST00000601688.5	467	6	12	-6970	12	-1	multi-exon	FALSE	canonical	1	41109	junction_5	40907.24541007375	NA	28	1	TRUE	NA	NA	NA	A	coding	641	1926	137	2062	25.0	7	True	NA	NA
PB.8498.12	chr3	-	3940	20	novel_in_catalog	AC079594.2	novel	3360	19	NA	NA	50587	-30729	intron_retention	FALSE	canonical	1	74776	junction_18	41699.030324457184	NA	2	NA	TRUE	NA	NA	NA	B	coding	640	1923	1676	3598	40.0	285	False	AATAAA	-16
PB.8498.13	chr3	-	3022	21	full-splice_match	IFT80	ENST00000496589.5	3073	21	48	3	-2	2	multi-exon	FALSE	canonical	1	18522	junction_19	50811.85742646592	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	758	2680	40.0	-10	True	AATAAA	-16
PB.8498.10	chr3	-	5087	20	novel_in_catalog	AC079594.2	novel	3360	19	NA	NA	50607	-29562	intron_retention	FALSE	canonical	1	74776	junction_18	41699.030324457184	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1923	1656	3578	55.0	-7	True	NA	NA
PB.8498.11	chr3	-	4019	21	novel_in_catalog	AC079594.2	novel	3360	19	NA	NA	50606	-30729	intron_retention	FALSE	canonical	1	5521	junction_19	58688.631460850236	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1923	1755	3677	40.0	-8	True	AATAAA	-16
PB.8498.16	chr3	-	2208	19	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50615	-31132	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	62524.317951369536	NA	0	NA	TRUE	NA	NA	NA	B	coding	697	2091	116	2206	60.0	1	True	AATAGA	-40
PB.8498.17	chr3	-	3500	20	novel_in_catalog	AC079594.2	novel	3360	19	NA	NA	50604	-31152	intron_retention	FALSE	canonical	1	74776	junction_18	41699.030324457184	NA	1	NA	TRUE	NA	NA	NA	B	coding	614	1842	1659	3500	50.0	-10	True	AATAGA	-20
PB.8498.14	chr3	-	2827	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50579	-30729	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	51731.799790962126	NA	0	NA	TRUE	NA	NA	NA	B	coding	777	2334	152	2485	40.0	4	True	AATAAA	-16
PB.8498.15	chr3	-	2410	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50593	-31132	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	51731.799790962126	NA	0	NA	TRUE	NA	NA	NA	B	coding	757	2271	138	2408	60.0	291	False	AATAGA	-40
PB.11327.13	chr8	-	3263	5	full-splice_match	FBXO32	ENST00000520511.1	807	5	-14	-2442	2	2442	multi-exon	FALSE	canonical	1	47486	junction_1	147233.457573975	NA	4	NA	TRUE	NA	NA	NA	C	coding	134	405	191	595	85.0	1	True	NA	NA
PB.11834.3	chr9	+	3445	5	novel_not_in_catalog	LRRC8A	novel	4355	4	NA	NA	-23	359	any annotated donor/acceptor	FALSE	canonical	1	14200	junction_2	147094.16662974775	NA	2	NA	TRUE	NA	NA	NA	C	coding	810	2433	286	2718	75.0	-9	True	AAAAAG	-26
PB.11834.2	chr9	+	3249	3	full-splice_match	LRRC8A	ENST00000372599.7	4161	3	-26	938	-26	359	multi-exon	FALSE	canonical	1	7303	junction_1	183449.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	90	2522	75.0	-12	True	AAAAAG	-26
PB.11834.1	chr9	+	3394	4	full-splice_match	LRRC8A	ENST00000372600.8	4355	4	21	940	21	360	multi-exon	FALSE	canonical	1	114313	junction_1	112173.59864364995	NA	2	NA	TRUE	NA	NA	NA	C	coding	810	2433	234	2666	80.0	-49	True	AAAAAG	-27
PB.311.3	chr1	+	5087	25	incomplete-splice_match	MACF1	ENST00000372925.6	14496	71	140908	8	5596	-1	5prime_fragment	FALSE	canonical	1	386870	junction_21	165285.34980169206	NA	1	NA	TRUE	NA	NA	NA	B	coding	1299	3900	3	3902	35.0	NA	False	ATTAAA	-13
PB.311.2	chr1	+	4544	27	novel_not_in_catalog	MACF1	novel	24319	101	NA	NA	3648	-147	any annotated donor/acceptor	FALSE	canonical	0	0	junction_23	211564.66207270153	NA	11	1	TRUE	NA	NA	NA	B	coding	1414	4245	24	4268	70.0	NA	False	AAAACA	-31
PB.311.1	chr1	+	5840	34	novel_not_in_catalog	MACF1	novel	24319	101	NA	NA	-4503	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	213190.91878948518	NA	1	1	TRUE	NA	NA	NA	B	coding	1408	4227	1206	5432	60.0	NA	False	TATAAA	-35
PB.11834.4	chr9	+	4285	4	full-splice_match	LRRC8A	ENST00000372600.8	4355	4	72	-2	-12	2	multi-exon	FALSE	canonical	1	114313	junction_1	112173.59864364995	NA	4	NA	TRUE	NA	NA	NA	C	coding	810	2433	183	2615	5.0	2	True	AATAAA	-17
PB.5945.1	chr19	+	3231	3	full-splice_match	ZNF146	ENST00000591063.5	533	3	10	-2708	0	-4	multi-exon	FALSE	canonical	1	45032	junction_1	325108.0	NA	2	1	TRUE	NA	NA	NA	C	coding	292	879	905	1783	35.0	0	True	ATTAAA	-19
PB.5945.2	chr19	+	3688	4	novel_in_catalog	ZNF146	novel	3780	3	NA	NA	121	-4	no_combination_of_known_junctions	FALSE	canonical	1	27211	junction_1	273007.1230975485	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1362	2240	35.0	0	True	ATTAAA	-19
PB.5945.3	chr19	+	3552	4	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	121	-5	any annotated donor/acceptor	FALSE	canonical	1	5340	junction_1	281747.1588704233	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1227	2105	35.0	0	True	ATTAAA	-18
PB.5945.4	chr19	+	3479	3	novel_not_in_catalog	ZNF146	novel	3780	3	NA	NA	121	-4	any annotated donor/acceptor	FALSE	canonical	1	9261	junction_1	342993.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1153	2031	35.0	0	True	ATTAAA	-19
PB.1616.9	chr10	+	3728	13	full-splice_match	NOLC1	ENST00000488254.6	2441	13	-17	-1270	-8	0	multi-exon	FALSE	canonical	1	673850	junction_2	251149.5081351362	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	25	2127	15.0	-2	True	NA	NA
PB.1616.8	chr10	+	2513	13	full-splice_match	NOLC1	ENST00000488254.6	2441	13	-16	-56	-7	56	multi-exon	FALSE	canonical	1	673850	junction_2	251149.5081351362	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	24	2126	50.0	-1	True	GATAAA	-17
PB.1616.7	chr10	+	1896	11	novel_in_catalog	NOLC1	novel	3932	13	NA	NA	-12	-950	combination_of_known_junctions	FALSE	canonical	1	166825	junction_6	354717.36153068405	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1866	29	1894	60.0	-6	True	GATAAA	-25
PB.1616.6	chr10	+	2656	13	full-splice_match	NOLC1	ENST00000488254.6	2441	13	-21	-194	-12	194	multi-exon	FALSE	canonical	1	673850	junction_2	251149.5081351362	NA	2	1	TRUE	NA	NA	NA	C	coding	700	2103	29	2131	30.0	-6	True	ATTAAA	-20
PB.1616.5	chr10	+	1734	10	incomplete-splice_match	NOLC1	ENST00000605788.5	3932	13	200	2815	-19	492	3prime_fragment	FALSE	canonical	1	515531	junction_2	232722.6328291118	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1698	36	1733	65.0	-6907	False	NA	NA
PB.1616.4	chr10	+	3001	13	full-splice_match	NOLC1	ENST00000488254.6	2441	13	-15	-545	-6	545	multi-exon	FALSE	canonical	1	673850	junction_2	251149.5081351362	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	23	2125	45.0	0	True	NA	NA
PB.1616.3	chr10	+	2703	13	novel_in_catalog	NOLC1	novel	3932	13	NA	NA	-30	193	combination_of_known_junctions	FALSE	canonical	1	166825	junction_6	367458.78880286997	NA	1	1	TRUE	NA	NA	NA	C	coding	710	2133	47	2179	30.0	-6918	False	ATTAAA	-19
PB.3680.7	chr14	+	2624	4	incomplete-splice_match	TNFAIP2	ENST00000559255.1	1410	5	0	-757	0	0	intron_retention	FALSE	canonical	1	699320	junction_3	27847.449127144286	NA	0	NA	TRUE	NA	NA	NA	B	coding	137	414	132	545	15.0	-4618	False	TATAAA	-17
PB.9229.3	chr5	+	2779	21	incomplete-splice_match	MTREX	ENST00000230640.9	4192	27	29	25087	29	-15635	3prime_fragment	FALSE	canonical	1	293780	junction_10	91408.02627005738	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2553	226	2778	15.0	3	True	AATAAA	-20
PB.6414.39	chr2	-	1868	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	85	8089	70	-26	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1629	239	1867	60.0	4	True	AAGAAA	-8
PB.6414.33	chr2	-	2432	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	55	685	no_combination_of_known_junctions	FALSE	canonical	1	1072	junction_15	147228.36669368064	NA	7	1	TRUE	NA	NA	NA	C	coding	533	1602	146	1747	85.0	-11	True	NA	NA
PB.6414.30	chr2	-	2468	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	59	688	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	131693.16078707337	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	250	1905	85.0	-7	True	NA	NA
PB.1965.1	chr11	+	1899	4	full-splice_match	CCDC86	ENST00000227520.9	1893	4	4	-10	4	10	multi-exon	FALSE	canonical	1	335482	junction_2	113382.30889732705	NA	0	NA	TRUE	NA	NA	NA	A	coding	360	1083	51	1133	30.0	4	True	NA	NA
PB.6414.36	chr2	-	2366	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	50	619	no_combination_of_known_junctions	FALSE	canonical	1	3425	junction_15	113571.98318626924	NA	4	NA	TRUE	NA	NA	NA	C	coding	551	1656	92	1747	50.0	-16	True	ATTAAA	-19
PB.9162.3	chr5	-	4661	36	novel_not_in_catalog	DROSHA	novel	5305	35	NA	NA	28	112	any annotated donor/acceptor	FALSE	canonical	1	77175	junction_18	108484.32576982667	NA	1	NA	TRUE	NA	NA	NA	C	coding	1357	4074	456	4529	20.0	-32	False	AATAAA	-19
PB.6414.34	chr2	-	2466	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	36	622	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	189	1844	40.0	117	False	ATTAAA	-22
PB.6414.35	chr2	-	2422	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	83	7537	68	526	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	241	1896	50.0	2	True	NA	NA
PB.4754.1	chr17	-	2560	2	full-splice_match	RNF227	ENST00000324348.8	2852	2	310	-18	-9	18	multi-exon	FALSE	canonical	1	37119	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-26	True	AATATA	-15
PB.5448.3	chr18	-	6283	4	full-splice_match	ZNF24	ENST00000399061.3	6282	4	0	-1	0	1	multi-exon	FALSE	canonical	1	289743	junction_3	142628.20380353328	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	171	1277	10.0	15	False	AATAAA	-22
PB.8311.2	chr3	-	2398	1	full-splice_match	AC093010.3	ENST00000570269.2	15214	1	5014	7802	5014	-7802	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	5007	False	NA	NA
PB.5448.5	chr18	-	6140	4	full-splice_match	ZNF24	ENST00000399061.3	6282	4	11	131	11	-131	multi-exon	FALSE	canonical	1	289743	junction_3	142628.20380353328	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	160	1266	20.0	-26	True	NA	NA
PB.5448.6	chr18	-	3265	4	full-splice_match	ZNF24	ENST00000399061.3	6282	4	18	2999	18	-2999	multi-exon	FALSE	canonical	1	289743	junction_3	142628.20380353328	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	153	1259	40.0	-19	True	AATAAA	-22
PB.5448.7	chr18	-	1597	4	full-splice_match	ZNF24	ENST00000399061.3	6282	4	30	4655	30	3353	multi-exon	FALSE	canonical	1	289743	junction_3	142628.20380353328	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	141	1247	30.0	-7	True	AATACA	-21
PB.5448.8	chr18	-	1286	4	full-splice_match	ZNF24	ENST00000399061.3	6282	4	-2	4998	-2	3010	multi-exon	FALSE	canonical	1	289743	junction_3	142628.20380353328	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	173	1279	75.0	13	False	AAGAAA	-4
PB.5448.9	chr18	-	3345	3	novel_in_catalog	ZNF24	novel	6307	4	NA	NA	-3	3010	intron_retention	FALSE	canonical	1	289743	junction_2	170130.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	174	776	75.0	12	False	AAGAAA	-4
PB.1116.2	chr1	+	3633	8	novel_in_catalog	VASH2	novel	1369	9	NA	NA	33	-6	combination_of_known_junctions	FALSE	canonical	1	9094	junction_2	25801.05042000248	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	672	1313	85.0	-87	False	NA	NA
PB.10027.12	chr6	-	2835	17	full-splice_match	MCM3	ENST00000229854.11	3083	17	0	248	0	-243	multi-exon	FALSE	canonical	1	801646	junction_8	344769.3400767887	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	78	2504	15.0	-10	True	NA	NA
PB.10027.13	chr6	-	2433	11	incomplete-splice_match	MCM3	ENST00000596288.5	3169	17	32	8595	32	3378	3prime_fragment	FALSE	canonical	1	801646	junction_2	173109.23126168054	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	132	1811	25.0	-64	False	NA	NA
PB.10027.11	chr6	-	2973	18	novel_not_in_catalog	MCM3	novel	3083	17	NA	NA	-36	-7	any annotated donor/acceptor	FALSE	canonical	1	12059	junction_1	443116.40576623916	NA	4	NA	TRUE	NA	NA	NA	C	coding	798	2397	114	2510	35.0	-46	True	AATAAA	-17
PB.9229.2	chr5	+	3386	27	full-splice_match	MTREX	ENST00000230640.9	4192	27	217	589	-24	7	multi-exon	FALSE	canonical	1	293780	junction_10	106909.144197837	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	38	3166	25.0	-46	False	AATAAA	-32
PB.8302.11	chr3	-	2142	7	full-splice_match	NEPRO	ENST00000383675.6	4672	7	53	2477	1	-4	multi-exon	FALSE	canonical	1	6814	junction_4	128883.74648841059	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	37	1527	35.0	40	False	ATTAAA	-19
PB.8302.12	chr3	-	2049	6	full-splice_match	NEPRO	ENST00000489848.5	1576	6	-72	-401	-9	-4	multi-exon	FALSE	canonical	1	6814	junction_4	149996.56589988986	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	232	1434	35.0	-22	False	ATTAAA	-19
PB.8302.13	chr3	-	5290	1	novel_in_catalog	NEPRO	novel	4992	9	NA	NA	0	-1100	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.9162.7	chr5	-	4490	35	novel_not_in_catalog	DROSHA	novel	5305	35	NA	NA	0	111	any annotated donor/acceptor	FALSE	canonical	1	77175	junction_18	107244.44678786298	NA	0	NA	TRUE	NA	NA	NA	C	coding	1320	3963	397	4359	20.0	27	False	AATAAA	-18
PB.8435.2	chr3	+	3390	6	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	6	459	combination_of_known_junctions	FALSE	canonical	1	110623	junction_4	32738.395497641603	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2772	619	3390	55.0	-1215	False	NA	NA
PB.9162.6	chr5	-	4514	35	full-splice_match	DROSHA	ENST00000511367.6	5305	35	-13	804	0	111	multi-exon	FALSE	canonical	1	68096	junction_34	104156.73110743742	NA	0	NA	TRUE	NA	NA	NA	C	coding	1365	4098	286	4383	20.0	-1	True	AATAAA	-18
PB.686.1	chr1	-	4137	1	novel_in_catalog	TXNIP	novel	2926	8	NA	NA	20	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	AATAAA	-14
PB.9162.9	chr5	-	4416	34	novel_in_catalog	DROSHA	novel	5305	35	NA	NA	-13	111	combination_of_known_junctions	FALSE	canonical	1	68096	junction_33	102279.46675341399	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	299	4285	20.0	-14	True	AATAAA	-18
PB.1971.2	chr11	-	4338	26	novel_in_catalog	DDB1	novel	4506	27	NA	NA	-32	3	intron_retention	TRUE	canonical	1	1156131	junction_22	370940.53276716796	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	1827	3650	15.0	-1	True	AATAAA	-22
PB.1971.6	chr11	-	4207	27	full-splice_match	DDB1	ENST00000301764.11	4506	27	290	9	-10	-9	multi-exon	FALSE	canonical	1	1156131	junction_23	363740.59876842145	NA	13	2	TRUE	NA	NA	NA	C	coding	1140	3423	109	3531	45.0	21	True	AATAAA	-10
PB.1971.9	chr11	-	4329	26	novel_in_catalog	DDB1	novel	4506	27	NA	NA	-39	-9	intron_retention	FALSE	canonical	1	1156131	junction_22	370696.6628794513	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	138	2306	45.0	-8	True	AATAAA	-10
PB.3409.1	chr14	-	296	3	full-splice_match	RPS29	ENST00000245458.10	296	3	-1	1	-1	-1	multi-exon	FALSE	canonical	1	11812328	junction_2	1662949.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-19
PB.7967.12	chr3	-	2113	6	full-splice_match	RFTN1	ENST00000483671.1	1314	6	-127	-672	-127	-2	multi-exon	FALSE	canonical	1	4287	junction_5	226078.73208685507	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	235	1143	25.0	-188	False	AATAAA	-13
PB.7967.14	chr3	-	1706	10	full-splice_match	RFTN1	ENST00000334133.8	2982	10	-12	1288	-12	-614	multi-exon	FALSE	canonical	1	261069	junction_9	114259.92012755634	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1419	286	1704	60.0	-20	True	NA	NA
PB.7938.10	chr3	-	3183	4	novel_not_in_catalog	VGLL4	novel	3725	6	NA	NA	32	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	131116.6941070265	NA	6	1	TRUE	NA	NA	NA	C	coding	178	537	161	697	25.0	-4	True	AATAAA	-14
PB.7179.3	chr20	-	3780	2	full-splice_match	FLRT3	ENST00000378053.3	4776	2	-21	1017	-13	-10	multi-exon	FALSE	canonical	1	63268	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	279	2228	50.0	1	True	AATAAA	-18
PB.7179.2	chr20	-	3974	3	full-splice_match	FLRT3	ENST00000341420.4	3971	3	-13	10	-13	-10	multi-exon	FALSE	canonical	1	24561	junction_1	8260.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	473	2422	50.0	1	True	AATAAA	-18
PB.5674.9	chr19	+	2713	13	novel_not_in_catalog	CERS4	novel	531	4	NA	NA	2	2292	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	165303.5325151045	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	281	1465	75.0	3	True	NA	NA
PB.5674.8	chr19	+	1619	11	full-splice_match	CERS4	ENST00000559450.5	1637	11	15	3	0	0	multi-exon	FALSE	canonical	1	20976	junction_1	132260.11522980008	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	126	1310	30.0	1	True	ATTAAA	-13
PB.7179.7	chr20	-	3841	3	full-splice_match	FLRT3	ENST00000341420.4	3971	3	-15	145	-15	-145	multi-exon	FALSE	canonical	1	24561	junction_1	8260.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	475	2424	55.0	-1	True	AATAAA	-7
PB.7179.6	chr20	-	3956	4	novel_not_in_catalog	FLRT3	novel	4776	2	NA	NA	-1	-145	any annotated donor/acceptor	FALSE	canonical	1	3924	junction_2	16733.115928202573	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	590	2539	55.0	2	True	AATAAA	-7
PB.7179.5	chr20	-	3658	2	full-splice_match	FLRT3	ENST00000378053.3	4776	2	-30	1148	-22	-141	multi-exon	FALSE	canonical	1	63268	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	288	2237	35.0	-8	True	AATAAA	-11
PB.7179.4	chr20	-	4406	3	novel_not_in_catalog	FLRT3	novel	4776	2	NA	NA	-15	-134	any annotated donor/acceptor	FALSE	canonical	1	16313	junction_1	12384.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	1029	2978	20.0	-1	True	AATAAA	-18
PB.5674.3	chr19	+	1820	12	novel_in_catalog	CERS4	novel	531	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	28092	junction_2	153036.8525991519	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	327	1511	30.0	-11	True	ATTAAA	-13
PB.3734.1	chr15	-	5554	7	full-splice_match	GABRB3	ENST00000400188.7	1900	7	-18	-3636	-18	-1	multi-exon	FALSE	canonical	1	8613	junction_6	59221.1745335981	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	106	1314	40.0	1	True	ATTAAA	-14
PB.3734.2	chr15	-	4345	7	full-splice_match	GABRB3	ENST00000400188.7	1900	7	-37	-2408	-37	4	multi-exon	FALSE	canonical	1	8613	junction_6	59221.1745335981	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	125	1333	25.0	31	False	AATAAA	-17
PB.3734.3	chr15	-	3437	7	full-splice_match	GABRB3	ENST00000400188.7	1900	7	-18	-1519	-18	774	multi-exon	FALSE	canonical	1	8613	junction_6	59221.1745335981	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	106	1314	65.0	1	True	NA	NA
PB.3734.4	chr15	-	2870	8	novel_in_catalog	GABRB3	novel	5581	7	NA	NA	2	124	no_combination_of_known_junctions	FALSE	canonical	1	1707	junction_7	73513.57863631975	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	153	1397	75.0	1	True	NA	NA
PB.3734.5	chr15	-	2789	7	full-splice_match	GABRB3	ENST00000400188.7	1900	7	-20	-869	-20	124	multi-exon	FALSE	canonical	1	8613	junction_6	59221.1745335981	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	108	1316	75.0	-1	True	NA	NA
PB.3734.6	chr15	-	2461	7	full-splice_match	GABRB3	ENST00000400188.7	1900	7	2	-563	2	-182	multi-exon	FALSE	canonical	1	8613	junction_6	59221.1745335981	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	86	1294	45.0	1	True	AAAACA	-19
PB.5674.4	chr19	+	1959	13	novel_not_in_catalog	CERS4	novel	531	4	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	16885	junction_3	177477.72129737784	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	408	1193	30.0	-7	True	ATTAAA	-13
PB.7698.1	chr22	+	1778	3	full-splice_match	CCDC157	ENST00000399824.6	1759	3	-9	-10	-9	10	multi-exon	FALSE	canonical	1	29078	junction_2	402.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.4722.8	chr17	+	2490	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	96265	junction_12	1015972.9427740682	NA	3	NA	TRUE	NA	NA	NA	C	coding	275	828	91	918	10.0	-43	True	AATAAA	-16
PB.11595.13	chr9	-	3989	6	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-81	2446	intron_retention	FALSE	canonical	1	18160	junction_5	57376.696044997225	NA	8	NA	TRUE	NA	NA	NA	C	coding	249	750	473	1222	15.0	-1	True	ATTAAA	-17
PB.11038.16	chr8	-	2679	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	20	153	combination_of_known_junctions	FALSE	canonical	1	84479	junction_5	104002.29838202162	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	217	1656	25.0	19	False	NA	NA
PB.4722.4	chr17	+	2093	19	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	12871	junction_5	1036631.8892663996	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	93	1925	10.0	-45	True	AATAAA	-16
PB.4722.5	chr17	+	3028	16	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	1566022	junction_1	656305.658909309	NA	12	2	TRUE	NA	NA	NA	C	coding	270	813	2047	2859	5.0	-43	True	AATAAA	-17
PB.4722.6	chr17	+	2857	18	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	648871	junction_1	847174.4417475114	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1877	2689	10.0	-43	True	AATAAA	-16
PB.4722.7	chr17	+	2322	19	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	648871	junction_1	826717.1493480708	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	1083	2153	5.0	-43	True	AATAAA	-17
PB.4722.1	chr17	+	2156	19	novel_not_in_catalog	ACADVL	novel	2227	21	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	978886.4554862302	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	105	1289	10.0	18	True	AATAAA	-16
PB.4722.2	chr17	+	2409	18	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	4	0	intron_retention	FALSE	canonical	1	1566022	junction_1	694947.6055569133	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	1171	2241	10.0	19	True	AATAAA	-16
PB.4722.3	chr17	+	2162	19	full-splice_match	ACADVL	ENST00000350303.9	2191	19	30	-1	-2	0	multi-exon	FALSE	canonical	1	86013	junction_2	992287.6573757341	NA	3	1	TRUE	NA	NA	NA	C	coding	633	1902	93	1994	10.0	-45	True	AATAAA	-16
PB.10326.2	chr6	-	739	8	full-splice_match	SFT2D1	ENST00000361731.3	1079	8	37	303	-7	-3	multi-exon	FALSE	canonical	1	616783	junction_2	186637.45377515594	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	74	553	35.0	-10	True	ATTAAA	-22
PB.10326.3	chr6	-	3901	6	novel_in_catalog	SFT2D1	novel	1079	8	NA	NA	17	-3	intron_retention	FALSE	canonical	1	685386	junction_1	175205.67894723048	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	50	487	35.0	14	True	ATTAAA	-22
PB.2150.1	chr11	+	3771	2	novel_not_in_catalog	AP002761.2	novel	618	2	NA	NA	-19010	3122	any annotated donor/acceptor	FALSE	canonical	1	2086	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	NA	False	NA	NA
PB.11038.12	chr8	-	2859	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	-21	292	combination_of_known_junctions	FALSE	canonical	1	84479	junction_5	104002.29838202162	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	258	1697	50.0	-22	True	AATAAA	-22
PB.8381.1	chr3	-	2420	10	full-splice_match	RPN1	ENST00000296255.7	2314	10	-1	-105	-1	105	multi-exon	FALSE	canonical	1	2140963	junction_9	501115.91771033045	NA	3	NA	TRUE	NA	NA	NA	C	coding	607	1824	51	1874	30.0	-33	False	NA	NA
PB.10326.1	chr6	-	1044	8	full-splice_match	SFT2D1	ENST00000361731.3	1079	8	27	8	12	-8	multi-exon	FALSE	canonical	1	616783	junction_2	186637.45377515594	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	84	563	50.0	-20	True	AATAAA	-12
PB.11038.11	chr8	-	2629	13	full-splice_match	ENTPD4	ENST00000358689.8	5861	13	31	3201	-17	293	multi-exon	FALSE	canonical	1	144087	junction_12	78344.02740419796	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	206	2056	50.0	-18	True	AATAAA	-23
PB.11038.10	chr8	-	2860	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	18	308	combination_of_known_junctions	FALSE	canonical	1	86000	junction_2	94016.9585070147	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	219	1682	40.0	17	True	AATAAA	-38
PB.8516.5	chr3	-	3635	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	46	1912	-3	-1912	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	141	602	45.0	-11	True	AATAAA	-13
PB.8562.4	chr3	+	3107	20	novel_in_catalog	PSMD2	novel	3449	21	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	70149	junction_6	440098.3738877384	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	809	2950	10.0	-19	True	AATAAA	-13
PB.11595.18	chr9	-	1566	1	novel_in_catalog	PTAR1	novel	616	3	NA	NA	2	-1265	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.9653.2	chr5	+	2713	5	full-splice_match	TMED9	ENST00000332598.6	1473	5	45	-1285	-14	1285	multi-exon	FALSE	canonical	1	2682660	junction_2	351762.78791466844	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	13	720	95.0	0	True	NA	NA
PB.9653.3	chr5	+	1763	4	full-splice_match	TMED9	ENST00000507723.1	1018	4	-69	-676	-14	-28	multi-exon	FALSE	canonical	1	2682660	junction_2	267858.53369061975	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	13	441	60.0	0	True	AATAAA	-29
PB.9653.1	chr5	+	1429	5	full-splice_match	TMED9	ENST00000332598.6	1473	5	44	0	-15	0	multi-exon	FALSE	canonical	1	2682660	junction_2	351762.78791466844	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	14	721	30.0	-1	True	AATAAA	-26
PB.10326.4	chr6	-	2407	7	novel_in_catalog	SFT2D1	novel	1079	8	NA	NA	4	-3	intron_retention	FALSE	canonical	1	685386	junction_1	168726.14307477334	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	92	505	35.0	-28	True	ATTAAA	-22
PB.5494.9	chr18	+	3186	29	novel_not_in_catalog	NEDD4L	novel	3335	29	NA	NA	-250	1	any annotated donor/acceptor	FALSE	canonical	1	173	junction_1	89649.66060251808	NA	2	NA	TRUE	NA	NA	NA	C	coding	916	2751	130	2880	45.0	-286	False	AATAAA	-17
PB.5494.8	chr18	+	3198	29	full-splice_match	NEDD4L	ENST00000456173.6	4978	29	195	1585	-68	-1	multi-exon	FALSE	canonical	1	20761	junction_1	87070.85094062326	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	391	2895	40.0	0	True	AATAAA	-14
PB.5494.7	chr18	+	3220	30	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	7	2	no_combination_of_known_junctions	FALSE	canonical	1	1493	junction_1	92208.38326860905	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	409	2913	50.0	3	True	AATAAA	-18
PB.5494.6	chr18	+	3349	30	novel_in_catalog	NEDD4L	novel	3335	29	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	1493	junction_1	92208.38326860905	NA	6	1	TRUE	NA	NA	NA	C	coding	834	2505	412	2916	30.0	0	True	ATTAAA	-19
PB.5494.5	chr18	+	3262	31	novel_not_in_catalog	NEDD4L	novel	3335	29	NA	NA	-148	2	any annotated donor/acceptor	FALSE	canonical	1	1905	junction_1	97881.88557009242	NA	11	2	TRUE	NA	NA	NA	C	coding	854	2565	391	2955	50.0	-9214	False	AATAAA	-18
PB.5494.4	chr18	+	4540	30	full-splice_match	NEDD4L	ENST00000382850.8	8251	30	-173	3884	-3	-502	multi-exon	FALSE	canonical	1	66154	junction_1	85114.33721397679	NA	2	NA	TRUE	NA	NA	NA	C	coding	955	2868	287	3154	20.0	-3	True	ATTAAA	-17
PB.5494.3	chr18	+	3494	30	full-splice_match	NEDD4L	ENST00000382850.8	8251	30	-200	4957	-19	2	multi-exon	FALSE	canonical	1	66154	junction_1	85114.33721397679	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	314	3181	45.0	-30	True	AATAAA	-24
PB.5494.2	chr18	+	3482	30	full-splice_match	NEDD4L	ENST00000382850.8	8251	30	-167	4936	3	23	multi-exon	FALSE	canonical	1	66154	junction_1	85114.33721397679	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	281	3148	40.0	3	True	AATAAA	-45
PB.5494.1	chr18	+	4932	30	full-splice_match	NEDD4L	ENST00000382850.8	8251	30	-63	3382	-63	0	multi-exon	FALSE	canonical	1	66154	junction_1	85114.33721397679	NA	4	1	TRUE	NA	NA	NA	C	coding	955	2868	177	3044	100.0	-1480	False	NA	NA
PB.8381.4	chr3	-	2389	11	novel_not_in_catalog	RPN1	novel	2314	10	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	3355	junction_10	1207877.6819611331	NA	3	NA	TRUE	NA	NA	NA	C	coding	435	1308	641	1948	15.0	-27	False	AATAAA	-19
PB.9128.1	chr5	+	3937	1	genic	NDUFS6	novel	NA	NA	NA	NA	-4	3053	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	158	477	23	499	90.0	-11	True	NA	NA
PB.8381.7	chr3	-	2049	10	full-splice_match	RPN1	ENST00000296255.7	2314	10	21	244	-7	-55	multi-exon	FALSE	canonical	1	2140963	junction_9	501115.91771033045	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	29	1852	75.0	-11	True	NA	NA
PB.7165.4	chr20	-	1656	11	full-splice_match	TRMT6	ENST00000203001.6	2327	11	40	631	18	-631	multi-exon	FALSE	canonical	1	213040	junction_10	33459.19881422746	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	92	1585	20.0	0	True	ATTAAA	-15
PB.7165.5	chr20	-	6350	1	novel_in_catalog	TRMT6	novel	2327	11	NA	NA	8	-1504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	117	354	857	1210	80.0	-32	True	GATAAA	-7
PB.8381.6	chr3	-	2148	11	novel_not_in_catalog	RPN1	novel	2314	10	NA	NA	-1	6	any annotated donor/acceptor	FALSE	canonical	1	327	junction_9	1208711.869828575	NA	7	2	TRUE	NA	NA	NA	C	coding	435	1308	583	1890	35.0	0	True	ATTAAA	-28
PB.8110.1	chr3	+	1988	6	full-splice_match	KLHDC8B	ENST00000332780.3	1959	6	-30	1	-30	-1	multi-exon	FALSE	canonical	1	101919	junction_1	37168.849818093644	NA	0	NA	TRUE	NA	NA	NA	A	coding	354	1065	240	1304	10.0	0	True	NA	NA
PB.7165.1	chr20	-	2213	11	full-splice_match	TRMT6	ENST00000203001.6	2327	11	87	27	28	-27	multi-exon	FALSE	canonical	1	213040	junction_10	33459.19881422746	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	45	1538	55.0	-20	True	AATAAA	-27
PB.7165.2	chr20	-	2436	11	full-splice_match	TRMT6	ENST00000473131.5	3025	11	-36	625	7	-27	multi-exon	FALSE	canonical	1	12145	junction_6	83324.64537074251	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	838	1761	55.0	-55	True	AATAAA	-27
PB.7165.3	chr20	-	2147	10	full-splice_match	TRMT6	ENST00000453074.6	2239	10	61	31	17	-31	multi-exon	FALSE	canonical	1	5235	junction_8	89373.80211363346	NA	13	NA	TRUE	NA	NA	NA	C	coding	327	984	493	1476	60.0	-1	True	AATAAA	-23
PB.6829.2	chr2	-	4367	21	full-splice_match	TLK1	ENST00000431350.6	5663	21	231	1065	-38	266	multi-exon	FALSE	canonical	1	68642	junction_15	120796.37118700006	NA	3	NA	TRUE	NA	NA	NA	C	coding	766	2301	175	2475	35.0	-2	True	ATTAAA	-20
PB.5649.3	chr19	-	3087	11	novel_not_in_catalog	SLC25A23	novel	736	4	NA	NA	2	-310	intron_retention	TRUE	non_canonical	0	0	junction_10	176580.90890908902	NA	0	NA	TRUE	NA	NA	NA	A	coding	468	1407	80	1486	75.0	1	True	NA	NA
PB.1116.3	chr1	+	4458	8	novel_in_catalog	VASH2	novel	1369	9	NA	NA	34	-2	intron_retention	FALSE	canonical	1	25405	junction_1	15455.429574972635	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	392	1459	25.0	-86	False	AATAAA	-17
PB.7666.4	chr22	+	2729	4	incomplete-splice_match	CRYBB2P1	ENST00000382734.9	1364	5	-12	-2	-12	2	intron_retention	FALSE	canonical	1	120960	junction_1	84815.02888442983	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	398	712	35.0	-12	True	AATAAA	-26
PB.7666.5	chr22	+	1364	5	full-splice_match	CRYBB2P1	ENST00000382734.9	1364	5	-9	9	-9	1	multi-exon	FALSE	canonical	1	66944	junction_4	99072.20278286943	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-9	True	AATAAA	-15
PB.7666.6	chr22	+	1485	6	novel_not_in_catalog	CRYBB2P1	novel	1364	5	NA	NA	-8	4	any annotated donor/acceptor	FALSE	canonical	1	66944	junction_5	96327.39508488745	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	AATAAA	-18
PB.7666.1	chr22	+	2293	4	incomplete-splice_match	CRYBB2P1	ENST00000382734.9	1364	5	-34	456	-34	-446	intron_retention	FALSE	canonical	1	120960	junction_1	84815.02888442983	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	420	734	20.0	-107	False	AATAAA	-15
PB.7666.2	chr22	+	2851	5	novel_not_in_catalog	CRYBB2P1	novel	1364	5	NA	NA	-21	-4	intron_retention	FALSE	canonical	1	98349	junction_2	93570.96974355882	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	526	840	30.0	-21	True	AATAAA	-20
PB.7666.3	chr22	+	2394	5	novel_not_in_catalog	CRYBB2P1	novel	1364	5	NA	NA	-15	-445	intron_retention	FALSE	canonical	1	98349	junction_2	93570.96974355882	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	520	834	20.0	-15	True	AATAAA	-16
PB.2025.2	chr11	+	2190	7	full-splice_match	GPR137	ENST00000438980.6	1596	7	-587	-7	-28	1	multi-exon	FALSE	canonical	1	180896	junction_3	44908.26438202166	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	695	1885	10.0	-6167	False	AATAAA	-26
PB.2025.1	chr11	+	1692	8	novel_in_catalog	GPR137	novel	1274	5	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	1	76910	junction_1	79328.43626856846	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	207	1397	15.0	3	True	AATAAA	-16
PB.9488.1	chr5	-	2312	7	novel_in_catalog	TMEM173	novel	3200	6	NA	NA	-4	4	intron_retention	FALSE	canonical	1	237893	junction_6	97802.3926593255	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	799	1581	15.0	-5	True	TTTAAA	-19
PB.9554.1	chr5	+	3590	12	full-splice_match	PPARGC1B	ENST00000309241.9	10568	12	-58	7036	-45	229	multi-exon	FALSE	canonical	1	23953	junction_3	7266.337366739362	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	91	3162	60.0	-1504	False	TATAAA	-16
PB.9488.2	chr5	-	2176	8	full-splice_match	TMEM173	ENST00000330794.8	1771	8	29	-434	-3	4	multi-exon	FALSE	canonical	1	237893	junction_7	108843.57183947755	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	306	1445	15.0	-4	True	TTTAAA	-19
PB.3056.26	chr13	+	4259	11	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1552	junction_1	46145.34948832873	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	295	1548	25.0	-23	True	AATAAA	-19
PB.3056.27	chr13	+	3945	8	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	-9	-1	no_combination_of_known_junctions	FALSE	canonical	1	2747	junction_1	38266.65167223391	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	376	1233	25.0	-12	True	AATAAA	-20
PB.3056.24	chr13	+	3790	9	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	-26	-2	no_combination_of_known_junctions	FALSE	canonical	1	18313	junction_8	42695.48183356173	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	232	1218	25.0	-148	False	AATAAA	-19
PB.3056.25	chr13	+	4009	10	full-splice_match	TNFRSF19	ENST00000382263.3	4151	10	-23	165	-2	-165	multi-exon	FALSE	canonical	1	30565	junction_1	31840.415219235652	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	208	1461	70.0	-26	True	NA	NA
PB.3056.22	chr13	+	2722	3	incomplete-splice_match	TNFRSF19	ENST00000248484.8	3276	10	72	79333	72	1145	3prime_fragment	FALSE	canonical	1	32776	junction_1	35453.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-9039	False	NA	NA
PB.3056.23	chr13	+	3011	10	full-splice_match	TNFRSF19	ENST00000382263.3	4151	10	-64	1204	-43	0	multi-exon	FALSE	canonical	1	30565	junction_1	31840.415219235652	NA	5	NA	TRUE	NA	NA	NA	C	coding	417	1254	249	1502	0.0	-165	False	AGTAAA	-16
PB.3056.20	chr13	+	1747	6	novel_not_in_catalog	TNFRSF19	novel	3276	10	NA	NA	410	35890	any annotated donor/acceptor	FALSE	canonical	1	2428	junction_5	53870.93481869421	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	104	616	95.0	-18	True	NA	NA
PB.3056.21	chr13	+	4158	10	full-splice_match	TNFRSF19	ENST00000248484.8	3276	10	54	-936	54	-268	multi-exon	FALSE	canonical	1	32776	junction_1	31324.725743234994	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	460	1713	35.0	12	True	AGTAAA	-15
PB.3056.28	chr13	+	3867	8	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	-9	-2	no_combination_of_known_junctions	FALSE	canonical	1	1788	junction_5	46871.89113500146	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	194	1156	25.0	-12	True	AATAAA	-19
PB.3056.29	chr13	+	3541	7	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	-9	1	no_combination_of_known_junctions	FALSE	canonical	1	2747	junction_1	46657.837087317566	NA	5	NA	TRUE	NA	NA	NA	C	coding	196	591	376	966	30.0	-12	True	AATAAA	-22
PB.8237.13	chr3	-	7494	28	novel_not_in_catalog	ROBO1	novel	7492	28	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	76872.50423002582	NA	1	1	TRUE	NA	NA	NA	B	coding	834	2505	3323	5827	25.0	-13	True	ATTAAA	-10
PB.7306.13	chr20	-	2616	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	50	1779	-5	-1779	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	109	1530	35.0	-11	True	AATAAA	-13
PB.128.1	chr1	+	4298	26	novel_in_catalog	ARHGEF10L	novel	4488	29	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	1	70944	junction_14	45897.07079012342	NA	1	NA	TRUE	NA	NA	NA	A	coding	1235	3708	103	3810	15.0	13	True	AATAAA	-20
PB.5137.9	chr17	-	1627	14	incomplete-splice_match	MKS1	ENST00000313863.10	2091	16	-19	2108	2	0	3prime_fragment	FALSE	canonical	1	126486	junction_10	19508.397655289966	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	22	1434	20.0	1	True	AATAAA	-21
PB.5137.8	chr17	-	2419	17	novel_in_catalog	MKS1	novel	2397	18	NA	NA	3	-7	intron_retention	FALSE	canonical	1	95827	junction_3	27090.997253974314	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	21	1514	10.0	2	True	CATAAA	-13
PB.5137.7	chr17	-	2390	18	novel_in_catalog	MKS1	novel	2397	18	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	1	4583	junction_14	44250.86038676376	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	587	1753	10.0	9	True	CATAAA	-15
PB.5137.6	chr17	-	3639	15	novel_in_catalog	MKS1	novel	2397	18	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	126486	junction_11	19828.356651394435	NA	2	NA	TRUE	NA	NA	NA	C	coding	470	1413	26	1438	5.0	-3	True	CATAAA	-16
PB.5137.5	chr17	-	2251	17	novel_in_catalog	MKS1	novel	2397	18	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	12426	junction_2	41312.30874066923	NA	1	NA	TRUE	NA	NA	NA	C	coding	561	1686	15	1700	5.0	8	True	CATAAA	-18
PB.5137.4	chr17	-	2345	18	full-splice_match	MKS1	ENST00000393119.6	2397	18	51	1	-1	-1	multi-exon	FALSE	canonical	1	93845	junction_2	29311.04096945045	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	25	1704	5.0	-2	True	CATAAA	-19
PB.5137.3	chr17	-	2903	17	novel_in_catalog	MKS1	novel	2397	18	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	93845	junction_2	27558.176320102237	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	46	1485	5.0	-23	False	CATAAA	-19
PB.5137.2	chr17	-	2248	17	full-splice_match	MKS1	ENST00000393120.6	1926	17	-18	-304	-1	0	multi-exon	FALSE	canonical	1	6844	junction_13	45144.94503051913	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	545	1606	0.0	-2	True	CATAAA	-20
PB.5137.1	chr17	-	2129	16	full-splice_match	MKS1	ENST00000313863.10	2091	16	-21	-17	0	1	multi-exon	TRUE	canonical	1	3218	junction_2	42755.883389306786	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	24	1394	0.0	-1	True	CATAAA	-21
PB.8579.1	chr3	+	1747	1	antisense	novelGene_TRA2B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	GATAAA	-25
PB.8200.2	chr3	+	1469	15	incomplete-splice_match	PXK	ENST00000484288.5	2031	18	-28	11374	-2	-4941	3prime_fragment	FALSE	canonical	1	172159	junction_1	70445.03717709753	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1362	107	1468	75.0	-54	True	NA	NA
PB.11226.10	chr8	-	4402	15	novel_in_catalog	NBN	novel	4666	16	NA	NA	-6	-2	no_combination_of_known_junctions	FALSE	canonical	1	4988	junction_4	159422.26577220598	NA	1	1	TRUE	NA	NA	NA	C	coding	731	2196	111	2306	15.0	-5	True	NA	NA
PB.11334.1	chr8	+	3247	3	full-splice_match	ZNF572	ENST00000319286.5	3275	3	0	28	0	-28	multi-exon	FALSE	canonical	1	7537	junction_1	3493.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	529	1590	155	1744	75.0	-18	True	NA	NA
PB.8200.5	chr3	+	2833	17	full-splice_match	PXK	ENST00000302779.9	1974	17	6	-865	1	-3	multi-exon	FALSE	canonical	1	33207	junction_16	112706.57565885894	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	104	1777	35.0	-51	True	ATTAAA	-9
PB.2483.18	chr12	+	5772	16	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	-35	2019	any annotated donor/acceptor	FALSE	canonical	1	815	junction_15	121435.37740371305	NA	3	NA	TRUE	NA	NA	NA	C	coding	1278	3837	104	3940	70.0	0	True	AAAAAG	-42
PB.11862.5	chr9	+	3056	20	full-splice_match	POMT1	ENST00000402686.7	3038	20	-25	7	1	1	multi-exon	FALSE	canonical	1	71055	junction_1	73051.0416153382	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	186	2363	5.0	-25	True	ATTAAA	-17
PB.10618.9	chr7	-	5316	16	novel_not_in_catalog	POM121C	novel	4073	2	NA	NA	-53	-675	any annotated donor/acceptor	FALSE	canonical	1	3766	junction_5	154305.1563823956	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	1022	3985	75.0	-26	False	NA	NA
PB.7771.1	chr22	+	2310	3	full-splice_match	MAFF	ENST00000338483.6	2490	3	174	6	60	0	multi-exon	FALSE	canonical	1	273397	junction_1	47547.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	189	683	35.0	0	True	AATAAA	-27
PB.10618.5	chr7	-	5873	15	full-splice_match	POM121C	ENST00000615331.4	5835	15	-36	-2	-36	-1	multi-exon	FALSE	canonical	1	3766	junction_5	157046.97695758205	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	902	3865	20.0	-9	True	AATAAA	-17
PB.7771.3	chr22	+	2227	4	novel_not_in_catalog	MAFF	novel	2490	3	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	156195.8903734524	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	255	749	35.0	-4	True	AATAAA	-27
PB.7771.2	chr22	+	2398	3	full-splice_match	MAFF	ENST00000538320.5	2458	3	58	2	-6	-2	multi-exon	FALSE	canonical	1	2116	junction_1	183187.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	281	775	40.0	-4	True	AATAAA	-23
PB.7771.5	chr22	+	2284	3	full-splice_match	MAFF	ENST00000426621.6	2216	3	-70	2	-70	-2	multi-exon	FALSE	canonical	1	921	junction_1	183785.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	164	495	167	661	40.0	862	False	AATAAA	-23
PB.7771.4	chr22	+	2081	3	full-splice_match	MAFF	ENST00000338483.6	2490	3	109	300	-5	-292	multi-exon	FALSE	canonical	1	273397	junction_1	47547.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	254	748	65.0	-3	True	NA	NA
PB.10618.2	chr7	-	5980	16	novel_not_in_catalog	POM121C	novel	4073	2	NA	NA	-39	0	any annotated donor/acceptor	FALSE	canonical	1	3766	junction_5	154305.1563823956	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	1008	3971	25.0	-12	False	AATAAA	-18
PB.7771.6	chr22	+	2253	3	full-splice_match	MAFF	ENST00000407965.1	2325	3	72	0	72	0	multi-exon	FALSE	canonical	1	1869	junction_1	183311.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	78	626	35.0	-4	True	AATAAA	-27
PB.11482.4	chr9	+	2414	8	full-splice_match	MTAP	ENST00000644715.1	4909	8	-33	2528	-26	157	multi-exon	FALSE	canonical	1	60552	junction_2	99944.68520544916	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	134	985	65.0	-4	True	NA	NA
PB.8200.8	chr3	+	2880	18	full-splice_match	PXK	ENST00000356151.6	2037	18	22	-865	-1	-3	multi-exon	FALSE	canonical	1	172159	junction_1	95894.84642809085	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	88	1824	35.0	-35	True	ATTAAA	-9
PB.7230.11	chr20	+	2050	18	full-splice_match	TM9SF4	ENST00000398022.6	3978	18	219	1709	-3	-38	multi-exon	FALSE	canonical	1	168870	junction_1	124571.49056141234	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	68	1945	20.0	-5	True	AATAAA	-24
PB.7230.10	chr20	+	3805	17	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	-2	-49	intron_retention	FALSE	canonical	1	168870	junction_1	121596.92271798811	NA	21	2	TRUE	NA	NA	NA	C	coding	373	1122	67	1188	10.0	-4	True	ATTAAA	-11
PB.7230.13	chr20	+	3655	17	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	3965	junction_2	184967.82569695357	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	195	1844	15.0	-4	True	AATAAA	-16
PB.7230.12	chr20	+	2079	18	novel_not_in_catalog	TM9SF4	novel	3978	18	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	20422	junction_17	175247.65623875393	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	68	1798	15.0	-5	True	AATAAA	-17
PB.7230.15	chr20	+	4037	18	full-splice_match	TM9SF4	ENST00000217315.9	4032	18	-7	2	1	-2	multi-exon	FALSE	canonical	1	6815	junction_1	156136.29596459385	NA	11	NA	TRUE	NA	NA	NA	C	coding	625	1878	348	2225	15.0	-1	True	AATAAA	-17
PB.7230.14	chr20	+	3805	19	novel_not_in_catalog	TM9SF4	novel	3978	18	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	1817	junction_12	237129.365836899	NA	2	NA	TRUE	NA	NA	NA	C	coding	416	1251	249	1499	15.0	-2	True	AATAAA	-15
PB.11862.2	chr9	+	2804	18	novel_in_catalog	POMT1	novel	2821	18	NA	NA	-6	-2	no_combination_of_known_junctions	FALSE	canonical	1	2729	junction_4	89800.46181257011	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	544	2106	15.0	-32	True	ATTAAA	-22
PB.6806.1	chr2	+	2374	3	full-splice_match	LINC01806	ENST00000436506.1	765	3	-14	-1595	2	-1	multi-exon	FALSE	canonical	1	29486	junction_2	2778.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	2	True	ATTAAA	-15
PB.5584.4	chr19	-	3492	5	novel_in_catalog	MOB3A	novel	3391	5	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	1	1621	junction_4	231096.90841979583	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	481	1134	20.0	9651	False	AATAAA	-22
PB.12183.1	chrX	-	1179	2	full-splice_match	TIMM8A	ENST00000647359.1	1194	2	13	2	13	-2	multi-exon	FALSE	canonical	1	25156	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	97	294	50	343	30.0	-24	True	AATAAA	-16
PB.7984.8	chr3	-	3186	21	incomplete-splice_match	SLC4A7	ENST00000437266.5	3407	23	20	9149	-4	-21	3prime_fragment	FALSE	canonical	1	23100	junction_10	64167.30082479705	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	275	1666	80.0	-17	False	AAAAAG	-13
PB.12373.2	chrY	-	1189	4	full-splice_match	SLC25A6	ENST00000381401.10_PAR_Y	2062	4	611	262	-10	-262	multi-exon	FALSE	canonical	1	986	junction_1	1734.6189463074847	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	105	1001	15.0	-2	True	NA	NA
PB.12373.1	chrX	-	2637	5	novel_not_in_catalog	SLC25A6	novel	2062	4	NA	NA	-10	3521	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	14677.611156111201	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	105	1001	15.0	-1	True	AATAAA	-21
PB.11279.8	chr8	-	3243	5	novel_in_catalog	NCALD	novel	3655	7	NA	NA	-9	-69	combination_of_known_junctions	FALSE	canonical	1	10080	junction_4	95110.87661250947	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	149	730	45.0	-12	True	AATAAA	-15
PB.7232.11	chr20	+	1605	7	full-splice_match	POFUT1	ENST00000375749.7	5235	7	4	3626	4	473	multi-exon	FALSE	canonical	1	240350	junction_1	41792.834554967536	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	59	1225	15.0	-6	True	NA	NA
PB.1336.3	chr10	+	2432	16	novel_not_in_catalog	APBB1IP	novel	2771	15	NA	NA	-84	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	147811.42715251155	NA	1	1	TRUE	NA	NA	NA	C	coding	624	1875	318	2192	35.0	-16	True	AATAAA	-23
PB.8150.2	chr3	-	2281	13	novel_in_catalog	RRP9	novel	1578	15	NA	NA	40	-1	intron_retention	FALSE	canonical	1	150304	junction_12	102252.79830003431	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	1283	2206	5.0	1	True	ATTAAA	-16
PB.8865.1	chr4	+	8015	47	novel_in_catalog	PTPN13	novel	8487	47	NA	NA	-40	0	no_combination_of_known_junctions	TRUE	canonical	1	23512	junction_6	56390.482590221145	NA	6	2	TRUE	NA	NA	NA	C	coding	2298	6897	521	7417	40.0	-6185	False	AATAAA	-19
PB.5280.6	chr17	+	3808	11	full-splice_match	SEPT9	ENST00000423034.6	3984	11	174	2	27	0	multi-exon	FALSE	canonical	1	256245	junction_1	1118418.0557042568	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	135	1874	35.0	27	True	AATAAA	-21
PB.8200.7	chr3	+	2925	19	novel_not_in_catalog	PXK	novel	2037	18	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	2892	junction_17	131310.51656237035	NA	1	1	TRUE	NA	NA	NA	C	coding	498	1497	95	1591	35.0	-42	True	ATTAAA	-9
PB.9451.3	chr5	+	1820	2	novel_in_catalog	TCF7	novel	3045	10	NA	NA	802	-10	intron_retention	FALSE	canonical	1	75136	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	121	366	3	368	100.0	-6269	False	NA	NA
PB.7177.5	chr20	-	2156	12	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-20	-4615	intron_retention	FALSE	canonical	1	72550	junction_11	61081.156612661616	NA	0	NA	TRUE	NA	NA	NA	B	coding	695	2085	71	2155	65.0	-1	True	AATAAA	-38
PB.7177.4	chr20	-	2302	13	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-23	-3079	intron_retention	FALSE	canonical	1	72550	junction_12	61463.21663175645	NA	3	NA	TRUE	NA	NA	NA	B	coding	743	2229	74	2302	65.0	-4	True	AAAAAG	-19
PB.7177.6	chr20	-	1972	10	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-11	-5361	any annotated donor/acceptor	FALSE	canonical	1	72550	junction_9	66219.04932779194	NA	0	NA	TRUE	NA	NA	NA	B	coding	637	1911	62	1972	75.0	8	True	GATAAA	-28
PB.7177.1	chr20	-	3177	14	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	72550	junction_13	62894.67638293093	NA	0	NA	TRUE	NA	NA	NA	B	coding	851	2556	71	2626	25.0	-1	True	AATAAA	-20
PB.5280.4	chr17	+	1983	12	novel_not_in_catalog	SEPT9	novel	582	2	NA	NA	-126	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	1302893.8024894893	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	141	1925	30.0	-5	True	AATAAA	-23
PB.7177.3	chr20	-	2512	14	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-41	-687	intron_retention	FALSE	canonical	1	72550	junction_13	62894.67638293093	NA	2	NA	TRUE	NA	NA	NA	B	coding	807	2421	92	2512	65.0	-22	True	NA	NA
PB.9550.2	chr5	+	3356	19	full-splice_match	AFAP1L1	ENST00000296721.8	4177	19	-17	838	-17	-838	multi-exon	FALSE	canonical	1	27361	junction_1	15526.42202996135	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	116	2422	25.0	-5	True	AGTAAA	-14
PB.7368.4	chr20	-	2349	11	novel_in_catalog	AURKA	novel	2238	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	14243	junction_9	158500.61068260905	NA	2	1	TRUE	NA	NA	NA	C	coding	403	1212	370	1581	15.0	-95	False	AATAAA	-15
PB.9451.1	chr5	+	2703	9	incomplete-splice_match	TCF7	ENST00000342854.9	3045	10	483	24	-7	-10	5prime_fragment	FALSE	canonical	1	155187	junction_2	109367.49757233351	NA	0	NA	TRUE	NA	NA	NA	B	coding	269	810	224	1033	100.0	-7642	False	NA	NA
PB.7177.9	chr20	-	1650	8	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-22	-38466	any annotated donor/acceptor	FALSE	canonical	1	72550	junction_7	70929.79345343492	NA	0	NA	TRUE	NA	NA	NA	B	coding	526	1578	73	1650	45.0	-3	True	NA	NA
PB.7177.8	chr20	-	1770	9	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-22	-31423	any annotated donor/acceptor	FALSE	canonical	1	72550	junction_8	70231.70968735828	NA	0	NA	TRUE	NA	NA	NA	B	coding	566	1698	73	1770	70.0	-3	True	NA	NA
PB.9550.4	chr5	+	1977	16	incomplete-splice_match	AFAP1L1	ENST00000515000.1	2319	18	-54	10393	-6	-10393	3prime_fragment	FALSE	canonical	1	27361	junction_1	15243.501756340489	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1872	105	1976	60.0	6	True	NA	NA
PB.9597.2	chr5	+	2175	11	full-splice_match	UBLCP1	ENST00000296786.7	2392	11	209	8	209	-4	multi-exon	FALSE	canonical	1	241580	junction_1	81626.36624277722	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	118	1074	30.0	0	True	AATAAA	-12
PB.7431.2	chr20	-	1530	6	full-splice_match	RGS19	ENST00000332298.9	1510	6	-24	4	-24	-4	multi-exon	FALSE	canonical	1	17084	junction_5	155784.23513385426	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	209	862	25.0	4940	False	TTTAAA	-2
PB.7696.1	chr22	-	1427	8	novel_in_catalog	CASTOR1	novel	402	3	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	24608	junction_3	47360.27225083772	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	46	924	5.0	-12	True	AATAAA	-16
PB.8865.6	chr4	+	1754	7	incomplete-splice_match	PTPN13	ENST00000427191.6	8487	47	2	113275	0	11579	3prime_fragment	FALSE	canonical	1	52878	junction_1	27458.335229640805	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	479	1678	25.0	-2	True	AATAAA	-19
PB.7696.2	chr22	-	1624	9	full-splice_match	CASTOR1	ENST00000407689.7	1623	9	-5	4	-5	-4	multi-exon	FALSE	canonical	1	42348	junction_8	36937.14091513277	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	136	1125	10.0	-6	False	AATAAA	-12
PB.7984.7	chr3	-	3325	22	incomplete-splice_match	SLC4A7	ENST00000437179.5	3667	24	-37	9327	12	-41	3prime_fragment	FALSE	canonical	1	104421	junction_21	52692.19878728301	NA	0	NA	TRUE	NA	NA	NA	C	coding	1022	3066	259	3324	65.0	-1	True	NA	NA
PB.8865.7	chr4	+	8583	48	novel_not_in_catalog	PTPN13	novel	8487	47	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	11448	junction_38	57867.37493828518	NA	13	1	TRUE	NA	NA	NA	C	coding	2502	7509	477	7985	40.0	0	True	AATAAA	-19
PB.7984.6	chr3	-	3318	22	novel_in_catalog	SLC4A7	novel	7970	28	NA	NA	0	-21	no_combination_of_known_junctions	FALSE	canonical	1	14407	junction_16	66257.23589228703	NA	2	NA	TRUE	NA	NA	NA	C	coding	1016	3048	271	3318	80.0	-13	False	AAAAAG	-13
PB.4427.8	chr16	+	2131	5	incomplete-splice_match	CHD9	ENST00000564845.5	11504	39	91	101062	91	-14	3prime_fragment	FALSE	canonical	1	17033	junction_1	73220.80162213126	NA	1	1	TRUE	NA	NA	NA	B	coding	640	1920	212	2131	70.0	0	True	NA	NA
PB.4427.9	chr16	+	2303	7	novel_not_in_catalog	CHD9	novel	11509	39	NA	NA	-101	-14	intron_retention	FALSE	canonical	1	2017	junction_1	86222.61027019279	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1920	384	2303	70.0	21	True	NA	NA
PB.4427.6	chr16	+	2187	5	novel_in_catalog	CHD9	novel	11509	39	NA	NA	6	-14	intron_retention	FALSE	canonical	1	4070	junction_1	78560.41128647431	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1920	268	2187	70.0	2	True	NA	NA
PB.4427.7	chr16	+	2048	3	incomplete-splice_match	CHD9	ENST00000564845.5	11504	39	17	117659	17	-21	3prime_fragment	FALSE	canonical	1	17033	junction_1	61383.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	587	1761	286	2046	65.0	-327	False	AAAACA	-18
PB.4427.4	chr16	+	2237	6	novel_not_in_catalog	CHD9	novel	11509	39	NA	NA	-11	-14	intron_retention	FALSE	canonical	1	879	junction_1	85389.1482037384	NA	1	1	TRUE	NA	NA	NA	B	coding	640	1920	318	2237	70.0	31	True	NA	NA
PB.4427.5	chr16	+	2309	1	novel_in_catalog	CHD9	novel	11509	39	NA	NA	3	-64630	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	140	423	1	423	85.0	51	True	NA	NA
PB.4427.2	chr16	+	2026	3	incomplete-splice_match	CHD9	ENST00000447540.5	11509	39	-42	117697	-42	-9	3prime_fragment	FALSE	canonical	1	17469	junction_1	61165.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	591	1773	252	2024	35.0	0	True	AAAACA	-30
PB.4427.3	chr16	+	2056	4	incomplete-splice_match	CHD9	ENST00000447540.5	11509	39	-41	104836	-41	-90	3prime_fragment	FALSE	canonical	1	17469	junction_1	72334.99491179141	NA	2	1	TRUE	NA	NA	NA	B	coding	602	1806	251	2056	80.0	1	True	NA	NA
PB.4427.1	chr16	+	2231	6	novel_in_catalog	CHD9	novel	11509	39	NA	NA	-49	-19	intron_retention	FALSE	canonical	1	9750	junction_4	75805.10225202523	NA	0	NA	TRUE	NA	NA	NA	B	coding	650	1953	259	2211	75.0	-7	True	TATAAA	-44
PB.7412.7	chr20	+	3068	14	novel_in_catalog	ARFGAP1	novel	3191	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	51181	junction_13	164493.07470802355	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	113	1333	25.0	0	True	AATAAA	-17
PB.7412.6	chr20	+	3901	12	novel_in_catalog	ARFGAP1	novel	3191	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	249623	junction_1	130376.93934007635	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	113	1099	25.0	0	True	AATAAA	-17
PB.7412.5	chr20	+	3228	13	novel_not_in_catalog	ARFGAP1	novel	3191	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	11	junction_11	179197.25673098268	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	114	1313	25.0	-1	True	AATAAA	-16
PB.7412.4	chr20	+	5268	12	novel_in_catalog	ARFGAP1	novel	3191	13	NA	NA	-3	0	intron_retention	FALSE	canonical	1	249623	junction_1	122301.06159240032	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	118	951	25.0	-5	True	AATAAA	-17
PB.7412.3	chr20	+	3147	12	full-splice_match	ARFGAP1	ENST00000549047.5	1040	12	-7	-2100	2	0	multi-exon	FALSE	canonical	1	9658	junction_2	180444.04962455563	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	171	1232	25.0	-9	True	AATAAA	-16
PB.7412.2	chr20	+	5924	11	novel_in_catalog	ARFGAP1	novel	3191	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	249623	junction_1	127650.62741095321	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	122	955	25.0	-9	True	AATAAA	-17
PB.7412.1	chr20	+	5484	13	novel_not_in_catalog	ARFGAP1	novel	3191	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	6932	junction_8	212682.59657153362	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	123	1088	25.0	-10	True	AATAAA	-17
PB.9297.11	chr5	+	2880	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	65	1640	1	-17	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	92	2758	10.0	12	True	AATAGA	-15
PB.8973.12	chr4	-	5024	4	incomplete-splice_match	ANKRD50	ENST00000504087.5	8794	5	-2	5241	-2	-1934	3prime_fragment	FALSE	canonical	1	93396	junction_3	6451.292394207192	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3984	1041	5024	40.0	-3	True	NA	NA
PB.8973.13	chr4	-	4026	3	novel_not_in_catalog	ANKRD50	novel	8794	5	NA	NA	-4	-37983	any annotated donor/acceptor	FALSE	canonical	1	8429	junction_1	42483.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	1043	1561	35.0	-5	True	AATAAA	-21
PB.8973.10	chr4	-	5690	5	full-splice_match	ANKRD50	ENST00000504087.5	8794	5	-2	3106	-2	201	multi-exon	FALSE	canonical	1	93396	junction_4	11157.245728673362	NA	0	NA	TRUE	NA	NA	NA	C	coding	1429	4290	1041	5330	15.0	-3	True	GATAAA	-36
PB.3496.10	chr14	+	2893	25	incomplete-splice_match	MTHFD1	ENST00000216605.12	3136	28	-15	5908	-15	289	3prime_fragment	FALSE	canonical	1	58134	junction_10	241173.16406110165	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	94	2808	40.0	-18	True	AATACA	-14
PB.7412.9	chr20	+	3246	13	full-splice_match	ARFGAP1	ENST00000370283.8	3281	13	30	5	-1	0	multi-exon	FALSE	canonical	1	249623	junction_1	125801.1874310237	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	111	1331	25.0	2	True	AATAAA	-16
PB.7412.8	chr20	+	3459	14	novel_not_in_catalog	ARFGAP1	novel	3191	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	6932	junction_8	205937.51642713748	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	112	1119	25.0	1	True	AATAAA	-17
PB.7955.20	chr3	-	1854	2	full-splice_match	FGD5-AS1	ENST00000424349.1	3792	2	29	1909	27	0	multi-exon	FALSE	canonical	1	318703	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	13	True	NA	NA
PB.7955.21	chr3	-	1708	2	full-splice_match	FGD5-AS1	ENST00000424349.1	3792	2	15	2069	13	-160	multi-exon	FALSE	canonical	1	318703	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.9297.13	chr5	+	4422	20	novel_not_in_catalog	HMGCR	novel	3395	20	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	1	6126	junction_10	182597.931475254	NA	2	NA	TRUE	NA	NA	NA	C	coding	857	2574	91	2664	40.0	13	True	AGTAAA	-24
PB.7571.1	chr21	+	3455	28	full-splice_match	COL6A2	ENST00000300527.8	3461	28	6	0	6	0	multi-exon	FALSE	canonical	1	1497909	junction_1	634659.8153873984	NA	0	NA	TRUE	NA	NA	NA	A	coding	1019	3060	99	3158	5.0	-20	True	AATAAA	-15
PB.6651.1	chr2	+	4476	6	full-splice_match	MRPL30	ENST00000338148.7	2605	6	70	-1941	-3	1941	multi-exon	FALSE	canonical	1	243839	junction_3	107372.90448637403	NA	3	NA	TRUE	NA	NA	NA	C	coding	161	486	129	614	25.0	-3	True	AATAAA	-26
PB.6651.3	chr2	+	1614	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39667	-125294	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	176230.01838829526	NA	1	1	TRUE	NA	NA	NA	B	coding	161	486	126	611	30.0	0	True	AATAAA	-20
PB.6651.2	chr2	+	2532	6	full-splice_match	MRPL30	ENST00000338148.7	2605	6	72	1	-1	-1	multi-exon	FALSE	canonical	1	243839	junction_3	107372.90448637403	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	127	612	20.0	-1	True	AATAAA	-25
PB.7233.2	chr20	+	4569	9	full-splice_match	KIF3B	ENST00000375712.3	6103	9	-7	1541	-7	-1541	multi-exon	FALSE	canonical	1	47660	junction_1	100094.85768478569	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	175	2418	55.0	1	True	NA	NA
PB.9297.16	chr5	+	3319	19	full-splice_match	HMGCR	ENST00000343975.9	3681	19	5	357	5	308	multi-exon	FALSE	canonical	1	96707	junction_12	174780.20293817922	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2508	88	2595	35.0	16	True	TATAAA	-6
PB.6651.7	chr2	+	3033	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39703	-123173	any annotated donor/acceptor	FALSE	canonical	1	34151	junction_6	165804.09968292902	NA	1	NA	TRUE	NA	NA	NA	B	coding	161	486	90	575	15.0	2	True	AATAAA	-19
PB.7233.1	chr20	+	4740	9	full-splice_match	KIF3B	ENST00000375712.3	6103	9	-16	1379	-16	-1379	multi-exon	FALSE	canonical	1	47660	junction_1	100094.85768478569	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	184	2427	100.0	-8	True	NA	NA
PB.6651.9	chr2	+	2297	6	full-splice_match	MRPL30	ENST00000338148.7	2605	6	115	193	8	10	multi-exon	FALSE	canonical	1	243839	junction_3	107372.90448637403	NA	2	NA	TRUE	NA	NA	NA	C	coding	161	486	84	569	30.0	8	True	AATAAA	-14
PB.6651.8	chr2	+	2357	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39706	-123171	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	176230.01838829526	NA	0	NA	TRUE	NA	NA	NA	B	coding	161	486	87	572	15.0	5	True	AATAAA	-21
PB.11284.43	chr8	-	2426	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-176	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	592723.65739164	NA	3	2	TRUE	NA	NA	NA	C	coding	363	1092	760	1851	25.0	-1	True	AATAAA	-22
PB.6170.1	chr19	-	2457	1	antisense	novelGene_ZNF175_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	229	690	1082	1771	65.0	-11	True	NA	NA
PB.9297.18	chr5	+	4563	19	novel_in_catalog	HMGCR	novel	3395	20	NA	NA	-4	305	intron_retention	FALSE	canonical	1	459471	junction_3	115292.59463669699	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	83	2545	25.0	21	True	AATAAA	-22
PB.10830.17	chr7	+	2135	9	novel_not_in_catalog	IRF5	novel	2988	9	NA	NA	-7	-9	any annotated donor/acceptor	FALSE	canonical	1	28	junction_5	109138.90252098184	NA	3	1	TRUE	NA	NA	NA	C	coding	255	768	807	1574	40.0	-26	True	AATGAA	-5
PB.3658.2	chr14	-	2747	12	novel_in_catalog	SETD3	novel	2878	13	NA	NA	-3	-4	no_combination_of_known_junctions	FALSE	canonical	1	1106	junction_11	161537.70859881406	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	280	1818	20.0	-5	True	ATTAAA	-15
PB.8892.7	chr4	-	2028	8	novel_not_in_catalog	TRMT10A	novel	3516	8	NA	NA	-7	388	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	35498.77719595653	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	146	1165	45.0	-1	True	AATAAA	-31
PB.7431.1	chr20	-	1875	6	full-splice_match	RGS19	ENST00000395042.1	1593	6	-286	4	33	-4	multi-exon	FALSE	canonical	1	76446	junction_5	138316.05648658436	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	554	1207	25.0	5174	False	TTTAAA	-2
PB.8892.4	chr4	-	3521	8	full-splice_match	TRMT10A	ENST00000394876.6	1638	8	13	-1896	-2	-8	multi-exon	FALSE	canonical	1	25119	junction_7	27792.830019445588	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	131	1150	45.0	-1	True	AATAAA	-34
PB.4148.6	chr16	-	2326	6	novel_in_catalog	UNKL	novel	4320	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	31441	junction_5	56238.35705494961	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	400	1098	85.0	-13	True	NA	NA
PB.4148.7	chr16	-	2269	6	novel_not_in_catalog	UNKL	novel	4320	6	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	3319	junction_5	64782.304680830865	NA	2	1	TRUE	NA	NA	NA	C	coding	232	699	343	1041	85.0	0	True	NA	NA
PB.4148.4	chr16	-	3458	15	full-splice_match	UNKL	ENST00000508903.6	3430	15	-28	0	1	0	multi-exon	FALSE	canonical	1	4826	junction_10	44950.04009878804	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	29	2230	85.0	-16	True	NA	NA
PB.4148.5	chr16	-	3232	14	novel_in_catalog	UNKL	novel	4320	6	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	4826	junction_10	50074.64171159269	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	13	2004	85.0	0	True	NA	NA
PB.4148.2	chr16	-	5265	15	full-splice_match	UNKL	ENST00000508903.6	3430	15	-29	-1806	0	0	multi-exon	FALSE	canonical	1	4826	junction_10	44950.04009878804	NA	3	1	TRUE	NA	NA	NA	C	coding	733	2202	30	2231	5.0	-17	True	ATTAAA	-13
PB.4148.3	chr16	-	2223	6	novel_not_in_catalog	UNKL	novel	4320	6	NA	NA	10	2	any annotated donor/acceptor	FALSE	canonical	1	3896	junction_5	64598.67504090158	NA	3	NA	TRUE	NA	NA	NA	C	coding	232	699	295	993	75.0	16	True	NA	NA
PB.4148.1	chr16	-	3966	6	full-splice_match	UNKL	ENST00000397464.5	2180	6	8	-1794	5	0	multi-exon	FALSE	canonical	1	31441	junction_5	63437.31371677083	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	383	931	5.0	4	True	ATTAAA	-14
PB.8892.2	chr4	-	3564	8	full-splice_match	TRMT10A	ENST00000394877.7	3516	8	-39	-9	-24	9	multi-exon	FALSE	canonical	1	13702	junction_7	31224.40715994134	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	157	1176	40.0	-18	False	AATAAA	-24
PB.7759.1	chr22	+	2826	6	full-splice_match	NOL12	ENST00000359114.8	2854	6	27	1	4	1	multi-exon	FALSE	canonical	1	215809	junction_1	103847.05129102126	NA	2	NA	TRUE	NA	NA	NA	A	coding	213	642	44	685	10.0	7	True	ATTAAA	-20
PB.4148.8	chr16	-	2160	6	full-splice_match	UNKL	ENST00000397464.5	2180	6	7	13	4	0	multi-exon	FALSE	canonical	1	31441	junction_5	63437.31371677083	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	384	932	85.0	3	True	NA	NA
PB.8892.3	chr4	-	3596	8	novel_in_catalog	TRMT10A	novel	3516	8	NA	NA	-20	-8	combination_of_known_junctions	FALSE	canonical	1	6982	junction_7	33303.02555416286	NA	6	NA	TRUE	NA	NA	NA	C	coding	339	1020	206	1225	45.0	288	False	AATAAA	-34
PB.6338.3	chr2	-	6306	21	full-splice_match	PUM2	ENST00000403432.5	3594	21	-146	-2566	2	-52	multi-exon	FALSE	canonical	1	242233	junction_9	196833.014489408	NA	4	NA	TRUE	NA	NA	NA	C	coding	1064	3195	271	3465	30.0	-15	True	TATAAA	-36
PB.7424.1	chr20	-	3103	1	full-splice_match	AL118506.1	ENST00000601296.2	3082	1	-23	2	-23	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-1	True	NA	NA
PB.2412.2	chr12	-	3132	4	full-splice_match	VAMP1	ENST00000361716.7	3449	4	310	7	0	-7	multi-exon	FALSE	canonical	1	151235	junction_3	38488.42304728354	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	147	500	20.0	-2	True	AATACA	-10
PB.7424.3	chr20	-	2099	3	intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3109	junction_1	4117.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	1	True	NA	NA
PB.10765.1	chr7	+	3048	3	novel_not_in_catalog	LHFPL3	novel	1852	3	NA	NA	451453	-85573	any annotated donor/acceptor	FALSE	canonical	1	44	junction_2	33.5	NA	1	NA	FALSE	NA	NA	NA	B	coding	131	396	1688	2083	45.0	-5268	False	AATAAA	-21
PB.12199.1	chrX	-	4336	1	genic	TCEAL3-AS1	novel	NA	NA	NA	NA	-3158	761	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-13	True	NA	NA
PB.10765.3	chr7	+	2359	2	novel_not_in_catalog	LHFPL3	novel	1852	3	NA	NA	451505	-122305	any annotated donor/acceptor	FALSE	canonical	1	13	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-5216	False	NA	NA
PB.10765.2	chr7	+	6311	1	novel_in_catalog	LHFPL3	novel	1852	3	NA	NA	451476	-120268	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	99	300	1528	1827	40.0	-5245	False	NA	NA
PB.8892.1	chr4	-	3620	8	novel_in_catalog	TRMT10A	novel	3516	8	NA	NA	-14	11	combination_of_known_junctions	TRUE	canonical	1	11219	junction_7	31988.042224990186	NA	7	1	TRUE	NA	NA	NA	C	coding	339	1020	211	1230	45.0	294	False	AATAAA	-26
PB.7011.7	chr2	+	2585	7	novel_in_catalog	BCS1L	novel	804	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	23662	junction_4	147536.54557139016	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	1275	2057	10.0	0	True	NA	NA
PB.6257.2	chr19	+	3300	3	full-splice_match	ZNF586	ENST00000396154.6	2163	3	-2	-1135	1	1098	multi-exon	FALSE	canonical	1	49489	junction_1	14386.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	176	1384	100.0	-8	True	NA	NA
PB.6257.1	chr19	+	2164	3	full-splice_match	ZNF586	ENST00000396154.6	2163	3	1	-2	1	2	multi-exon	FALSE	canonical	1	49489	junction_1	14386.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	173	1381	20.0	-5	True	AATAAA	-18
PB.4132.5	chr16	+	3116	12	novel_in_catalog	PIGQ	novel	603	3	NA	NA	0	-12	intron_retention	FALSE	canonical	1	11844	junction_9	117679.82479058934	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	139	1821	10.0	-13	True	AATAAA	-34
PB.4132.4	chr16	+	2207	3	full-splice_match	PIGQ	ENST00000470411.2	2112	3	-100	5	-6	-5	multi-exon	FALSE	canonical	1	108519	junction_1	80818.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	145	1044	40.0	-19	True	TATAAA	-11
PB.4132.6	chr16	+	2042	4	full-splice_match	PIGQ	ENST00000422307.6	2052	4	6	4	1	-4	multi-exon	FALSE	canonical	1	108519	junction_1	75232.77930973086	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	125	1315	15.0	1	True	TATAAA	-29
PB.4132.1	chr16	+	2999	11	full-splice_match	PIGQ	ENST00000321878.9	3006	11	-16	23	-16	4	multi-exon	FALSE	canonical	1	108519	junction_1	81554.81617225312	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	176	1921	10.0	-4407	False	AATAAA	-23
PB.4132.3	chr16	+	2925	10	full-splice_match	PIGQ	ENST00000026218.9	2846	10	-75	-4	-4	4	multi-exon	FALSE	canonical	1	46076	junction_9	101484.50712604995	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	164	2446	10.0	-38	True	AATAAA	-23
PB.4132.2	chr16	+	3084	9	novel_in_catalog	PIGQ	novel	603	3	NA	NA	-5	0	intron_retention	FALSE	canonical	1	46076	junction_8	107359.91274032116	NA	2	NA	TRUE	NA	NA	NA	C	coding	496	1491	1120	2610	10.0	-39	True	AATAAA	-18
PB.4063.2	chr15	-	1985	9	full-splice_match	MFGE8	ENST00000558018.5	1989	9	2	2	2	-2	multi-exon	FALSE	canonical	1	2934	junction_8	833117.4274189139	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	136	1275	10.0	1	True	AATATA	-18
PB.4063.3	chr15	-	1906	8	novel_not_in_catalog	MFGE8	novel	1989	9	NA	NA	6	-2	intron_retention	FALSE	canonical	1	2456	junction_1	849042.6430154695	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	87	998	10.0	-1	True	AATATA	-18
PB.4063.1	chr15	-	1959	8	full-splice_match	MFGE8	ENST00000268150.12	1937	8	6	-28	6	-3	multi-exon	FALSE	canonical	1	663106	junction_7	513436.5498005591	NA	3	NA	TRUE	NA	NA	NA	C	coding	387	1164	87	1250	10.0	-1	True	AATATA	-17
PB.4063.6	chr15	-	1715	9	full-splice_match	MFGE8	ENST00000566497.5	1689	9	4	-30	2	-2	multi-exon	FALSE	canonical	1	4532	junction_1	721699.4735464687	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	59	1222	10.0	1	True	AATATA	-18
PB.4063.7	chr15	-	4316	5	incomplete-splice_match	MFGE8	ENST00000558029.5	849	6	-17	635	0	-3	3prime_fragment	FALSE	canonical	1	663106	junction_4	574349.5270305248	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	61	768	35.0	-1	True	AATAAA	-17
PB.4063.4	chr15	-	1809	7	full-splice_match	MFGE8	ENST00000268151.11	1752	7	-29	-28	1	-2	multi-exon	FALSE	canonical	1	239688	junction_1	717356.4820774643	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	92	1099	10.0	-6	True	AATATA	-18
PB.4063.5	chr15	-	1714	7	novel_in_catalog	MFGE8	novel	1989	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1749	junction_2	773556.4839052731	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	61	957	10.0	-1	True	AATATA	-18
PB.10779.6	chr7	+	4119	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	445	-132	0	132	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	23	1498	20.0	-3	True	ATTAAA	-19
PB.10779.7	chr7	+	4058	7	full-splice_match	CBLL1	ENST00000432748.5	573	7	0	-3485	0	-2	multi-exon	FALSE	canonical	1	26507	junction_2	134513.59675966675	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	459	1571	25.0	-3	True	AATAAA	-17
PB.4063.8	chr15	-	3053	6	incomplete-splice_match	MFGE8	ENST00000558018.5	1989	9	0	4819	0	288	3prime_fragment	FALSE	canonical	1	2934	junction_5	881233.7069230614	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	138	821	80.0	-1	True	NA	NA
PB.4063.9	chr15	-	3027	5	incomplete-splice_match	MFGE8	ENST00000558029.5	849	6	-44	1951	5	288	3prime_fragment	FALSE	canonical	1	663106	junction_4	574349.5270305248	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	88	795	80.0	-2	True	NA	NA
PB.10779.2	chr7	+	3914	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	448	70	0	-70	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	20	1495	30.0	0	True	ATTAAA	-18
PB.10779.3	chr7	+	1897	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	446	2089	1	-108	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	22	1497	35.0	-2	True	ATTAAA	-15
PB.6645.4	chr2	-	6270	41	full-splice_match	TMEM131	ENST00000186436.9	6640	41	370	0	23	0	multi-exon	TRUE	canonical	1	118599	junction_40	81148.42633205758	NA	1	1	TRUE	NA	NA	NA	A	coding	1834	5505	7	5511	20.0	686	False	AATAAA	-14
PB.10779.1	chr7	+	2010	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	447	1975	-1	6	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	21	1496	35.0	-1	True	AATAAA	-23
PB.9836.10	chr6	+	1876	7	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-16	-115	intron_retention	FALSE	canonical	1	5406965	junction_5	3069723.530972781	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	23	1063	35.0	0	True	ATTAAA	-16
PB.5042.6	chr17	+	3271	11	novel_in_catalog	DBF4B	novel	1810	15	NA	NA	10	304	combination_of_known_junctions	FALSE	canonical	1	10065	junction_1	47643.10431111726	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	563	2089	35.0	1	True	AATAAA	-19
PB.5042.4	chr17	+	2900	13	novel_in_catalog	DBF4B	novel	1810	15	NA	NA	0	1	intron_retention	FALSE	canonical	1	7133	junction_12	44701.72087936201	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	214	1512	20.0	-9	True	NA	NA
PB.5042.5	chr17	+	3357	13	novel_not_in_catalog	DBF4B	novel	1810	15	NA	NA	4	298	any annotated donor/acceptor	FALSE	canonical	1	43415	junction_5	39612.26039678947	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	913	2181	45.0	-5	True	AATAAA	-13
PB.5042.2	chr17	+	2641	5	full-splice_match	DBF4B	ENST00000528353.5	2495	5	-22	-124	-22	124	multi-exon	FALSE	canonical	1	79260	junction_2	25517.40900223806	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	236	700	65.0	-31	True	NA	NA
PB.5042.3	chr17	+	3442	13	incomplete-splice_match	DBF4B	ENST00000315005.7	2997	14	-36	1720	-9	305	3prime_fragment	FALSE	canonical	1	43415	junction_5	38344.55353645055	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	223	2259	35.0	-18	True	AATAAA	-20
PB.5042.1	chr17	+	3377	12	full-splice_match	DBF4B	ENST00000526924.5	2998	12	-74	-305	16	305	multi-exon	FALSE	canonical	1	35634	junction_5	36683.40455440961	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	668	2194	35.0	-41	True	AATAAA	-20
PB.9619.2	chr5	-	2412	3	full-splice_match	UBTD2	ENST00000393792.2	3301	3	311	578	311	-578	multi-exon	FALSE	canonical	1	187785	junction_2	78440.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	96	800	30.0	-1	True	ATTAAA	-15
PB.9199.8	chr5	-	3326	1	novel_in_catalog	OXCT1	novel	3388	17	NA	NA	96	-117497	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	63	192	170	361	80.0	1	True	NA	NA
PB.9199.7	chr5	-	1841	17	full-splice_match	OXCT1	ENST00000196371.9	3388	17	79	1468	79	48	multi-exon	FALSE	canonical	1	367830	junction_16	81816.48192637345	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	83	1645	30.0	96	False	AATAAA	-17
PB.9199.6	chr5	-	2560	17	full-splice_match	OXCT1	ENST00000196371.9	3388	17	22	806	22	-30	multi-exon	FALSE	canonical	1	367830	junction_16	81816.48192637345	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	140	1702	10.0	0	True	AATAAA	-16
PB.11733.10	chr9	-	2803	14	full-splice_match	FKBP15	ENST00000414250.1	2815	14	13	-1	13	1	multi-exon	FALSE	canonical	1	163856	junction_10	41619.76692794056	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	63	1481	70.0	-10	True	NA	NA
PB.9199.4	chr5	-	2776	11	novel_in_catalog	OXCT1	novel	3388	17	NA	NA	94	-2	combination_of_known_junctions	FALSE	canonical	1	3416	junction_4	189569.05906333978	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	68	1114	20.0	-1	True	AATAAA	-16
PB.9199.3	chr5	-	3277	16	novel_in_catalog	OXCT1	novel	3388	17	NA	NA	19	-2	no_combination_of_known_junctions	FALSE	canonical	1	8173	junction_3	153287.4926812868	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	143	1615	20.0	-3	True	AATAAA	-16
PB.9199.2	chr5	-	3371	17	novel_not_in_catalog	OXCT1	novel	3388	17	NA	NA	-15	-2	any annotated donor/acceptor	FALSE	canonical	1	5152	junction_5	196207.85803990974	NA	18	3	TRUE	NA	NA	NA	C	coding	510	1533	177	1709	20.0	2	True	AATAAA	-16
PB.9199.1	chr5	-	3469	17	full-splice_match	OXCT1	ENST00000196371.9	3388	17	-82	1	-82	-1	multi-exon	FALSE	canonical	1	367830	junction_16	81816.48192637345	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	244	1806	20.0	-65	False	AATAAA	-17
PB.11636.1	chr9	-	2376	8	full-splice_match	CDK20	ENST00000325303.8	2175	8	-15	-186	-14	-2	multi-exon	FALSE	canonical	1	18653	junction_4	27447.327867412238	NA	0	NA	TRUE	NA	NA	NA	A	coding	346	1041	322	1362	65.0	-81	False	NA	NA
PB.854.2	chr1	-	2616	7	full-splice_match	SLAMF6	ENST00000368055.1	730	7	-12	-1874	-1	211	multi-exon	FALSE	canonical	1	6622	junction_6	54366.71742819007	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	63	728	40.0	-3	True	NA	NA
PB.10989.12	chr8	-	1509	8	incomplete-splice_match	LONRF1	ENST00000398246.7	3594	12	208	9883	208	-2603	3prime_fragment	FALSE	canonical	1	85561	junction_7	42191.50963627345	NA	0	NA	TRUE	NA	NA	NA	B	coding	192	576	934	1509	65.0	2605	False	NA	NA
PB.1885.8	chr11	-	2494	11	novel_in_catalog	FBXO3	novel	5798	10	NA	NA	4	-135	combination_of_known_junctions	FALSE	canonical	1	31920	junction_1	100284.83530205351	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	16	1263	50.0	7	True	NA	NA
PB.1134.1	chr1	+	4643	2	incomplete-splice_match	MARC2	ENST00000359316.6	1335	5	-15	25201	-15	-2725	3prime_fragment	FALSE	canonical	1	124626	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	279	806	25.0	4	True	NA	NA
PB.1134.2	chr1	+	1641	8	full-splice_match	MARC2	ENST00000366913.7	2134	8	-80	573	-15	2	multi-exon	FALSE	canonical	1	122822	junction_4	17535.508403795764	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	279	1286	50.0	4	True	AATAAA	-21
PB.1134.3	chr1	+	2204	8	full-splice_match	MARC2	ENST00000366913.7	2134	8	-75	5	-10	-5	multi-exon	FALSE	canonical	1	122822	junction_4	17535.508403795764	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	274	1281	15.0	9	True	AATAAA	-18
PB.10091.14	chr6	-	3017	28	novel_in_catalog	SNX14	novel	3348	26	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	20359	junction_4	134234.8471629738	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	196	2850	20.0	-38	True	AATAAA	-29
PB.6247.1	chr19	+	4025	4	full-splice_match	ZNF549	ENST00000376233.7	4053	4	-92	120	-24	-7	multi-exon	FALSE	canonical	1	24382	junction_1	4269.398578514569	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	274	2196	85.0	-55	False	NA	NA
PB.6247.2	chr19	+	3872	4	full-splice_match	ZNF549	ENST00000376233.7	4053	4	179	2	146	-2	multi-exon	FALSE	canonical	1	24382	junction_1	4269.398578514569	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	3	1925	25.0	216	False	NA	NA
PB.2607.1	chr12	+	8578	38	full-splice_match	DIP2B	ENST00000301180.9	8593	38	4	11	4	-11	multi-exon	FALSE	canonical	1	121133	junction_1	43186.97477996956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1576	4731	31	4761	25.0	0	True	AATAAA	-13
PB.2607.2	chr12	+	5621	38	full-splice_match	DIP2B	ENST00000301180.9	8593	38	-122	3094	0	478	multi-exon	FALSE	canonical	1	121133	junction_1	43186.97477996956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1576	4731	157	4887	5.0	-4	True	AAAAAG	-37
PB.2607.3	chr12	+	5159	38	full-splice_match	DIP2B	ENST00000301180.9	8593	38	-122	3556	0	16	multi-exon	TRUE	canonical	1	121133	junction_1	43186.97477996956	NA	1	NA	TRUE	NA	NA	NA	C	coding	1576	4731	157	4887	25.0	-4	True	ACTAAA	-29
PB.2607.4	chr12	+	8572	37	novel_in_catalog	DIP2B	novel	2676	8	NA	NA	5	-12	no_combination_of_known_junctions	FALSE	canonical	1	1731	junction_3	55324.67318450442	NA	6	NA	TRUE	NA	NA	NA	C	coding	1534	4605	152	4756	20.0	1	True	AATAAA	-12
PB.2607.5	chr12	+	3301	10	incomplete-splice_match	DIP2B	ENST00000301180.9	8593	38	-105	63574	17	-1799	3prime_fragment	FALSE	canonical	1	121133	junction_1	41548.51656337785	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	140	1486	80.0	13	True	NA	NA
PB.2607.6	chr12	+	8435	37	novel_in_catalog	DIP2B	novel	2676	8	NA	NA	56	-11	no_combination_of_known_junctions	FALSE	canonical	1	21154	junction_4	53537.38526132556	NA	0	NA	TRUE	NA	NA	NA	C	coding	1505	4518	101	4618	25.0	-6273	False	AATAAA	-13
PB.9172.5	chr5	-	2944	4	full-splice_match	AMACR	ENST00000382072.6	2919	4	-51	26	2	-26	multi-exon	FALSE	canonical	1	44896	junction_2	219018.32798345134	NA	52	NA	TRUE	NA	NA	NA	C	coding	198	597	64	660	80.0	-1	True	NA	NA
PB.3103.1	chr13	+	4314	28	incomplete-splice_match	NBEA	ENST00000379939.6	10738	57	253202	1347	125910	-1346	5prime_fragment	TRUE	canonical	1	49649	junction_2	15206.9492447806	NA	0	NA	TRUE	NA	NA	NA	A	coding	1247	3744	173	3916	80.0	-8747	False	NA	NA
PB.12246.7	chrX	-	3086	9	novel_not_in_catalog	TMEM255A	novel	3394	10	NA	NA	6767	-98	any annotated donor/acceptor	FALSE	canonical	1	47	junction_8	11532.086454079981	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	249	965	35.0	6900	False	ATTAAA	-20
PB.12246.6	chrX	-	2909	7	novel_not_in_catalog	TMEM255A	novel	3394	10	NA	NA	6985	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	15975.506979435739	NA	3	1	TRUE	NA	NA	NA	C	coding	90	273	138	410	25.0	6	True	AATAAA	-17
PB.12246.3	chrX	-	3115	8	novel_not_in_catalog	TMEM255A	novel	3394	10	NA	NA	6954	0	any annotated donor/acceptor	FALSE	canonical	1	667	junction_7	12060.259991443985	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	180	896	25.0	-25	True	AATAAA	-18
PB.12246.2	chrX	-	3153	7	full-splice_match	TMEM255A	ENST00000440464.5	3172	7	19	0	19	0	multi-exon	FALSE	canonical	1	2733	junction_2	12041.475123044058	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	209	934	25.0	18	False	AATAAA	-18
PB.12246.1	chrX	-	3253	9	full-splice_match	TMEM255A	ENST00000371369.8	3425	9	72	100	-31	-99	multi-exon	FALSE	canonical	1	25096	junction_8	4908.839953339281	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	156	1133	30.0	-4	True	ATTAAA	-19
PB.8646.8	chr4	+	2693	11	novel_in_catalog	PCGF3	novel	589	6	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	1	71432	junction_4	143866.04704515936	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	1526	2152	40.0	15	True	TATAAA	-38
PB.8646.7	chr4	+	2990	12	novel_in_catalog	PCGF3	novel	589	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	66498	junction_3	150017.24277826663	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	477	1205	50.0	14	True	AATAAA	-18
PB.8646.6	chr4	+	6161	11	novel_in_catalog	PCGF3	novel	589	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	71432	junction_4	143866.04704515936	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	1527	2153	25.0	14	True	AATAAA	-17
PB.8646.5	chr4	+	6255	10	novel_in_catalog	PCGF3	novel	589	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	159809	junction_1	121790.24882949625	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	1621	2247	25.0	14	True	AATAAA	-17
PB.8646.4	chr4	+	5214	12	novel_in_catalog	PCGF3	novel	589	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	66498	junction_3	150017.24277826663	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	478	1206	25.0	13	True	AATAAA	-17
PB.8646.3	chr4	+	3197	11	full-splice_match	PCGF3	ENST00000362003.9	5685	11	16	2472	-1	304	multi-exon	FALSE	canonical	1	159809	junction_1	123077.92259231546	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	380	1108	15.0	12	True	AATACA	-35
PB.11983.1	chrX	+	1978	4	novel_not_in_catalog	ZRSR2	novel	744	4	NA	NA	-7	162	any annotated donor/acceptor	FALSE	canonical	1	2780	junction_3	37085.108892324366	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-19	True	ATTAAA	-21
PB.11983.2	chrX	+	1493	11	full-splice_match	ZRSR2	ENST00000307771.7	1491	11	-5	3	-5	-3	multi-exon	FALSE	canonical	1	6913	junction_9	35599.912457757535	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	30	1478	35.0	-17	True	AATAAA	-15
PB.12246.8	chrX	-	3854	1	novel_in_catalog	TMEM255A	novel	3394	10	NA	NA	6973	9317	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-6	True	NA	NA
PB.8528.1	chr3	+	2145	1	antisense	novelGene_ZMAT3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	171	516	1475	1990	80.0	NA	False	NA	NA
PB.9172.2	chr5	-	3077	4	full-splice_match	AMACR	ENST00000382072.6	2919	4	-19	-139	-19	139	multi-exon	FALSE	canonical	1	44896	junction_2	219018.32798345134	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	32	628	80.0	-2	True	NA	NA
PB.1064.5	chr1	-	3171	1	novel_in_catalog	ELK4	novel	2535	10	NA	NA	-12699	-1780	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	7780	False	TATAAA	-13
PB.11460.12	chr9	-	4505	12	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-56	-4775	any annotated donor/acceptor	FALSE	canonical	1	37	junction_9	58931.99893251389	NA	2	NA	TRUE	NA	NA	NA	C	coding	265	798	588	1385	45.0	15	True	TATAAA	-21
PB.11460.13	chr9	-	3096	10	full-splice_match	ZDHHC21	ENST00000380916.8	9160	10	127	5937	-79	-5937	multi-exon	FALSE	canonical	1	59266	junction_7	33911.138061369806	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	341	1138	35.0	-8	True	AATAAA	-38
PB.3113.1	chr13	-	3222	22	full-splice_match	POSTN	ENST00000379743.8	3196	22	-23	-3	-12	0	multi-exon	FALSE	canonical	1	334809	junction_3	257883.7257911986	NA	0	NA	TRUE	NA	NA	NA	A	coding	809	2430	48	2477	25.0	-6	True	ATTAAA	-13
PB.11460.11	chr9	-	4206	9	novel_in_catalog	ZDHHC21	novel	9160	10	NA	NA	102	-4722	no_combination_of_known_junctions	FALSE	canonical	1	886	junction_7	48238.37150790203	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	236	1033	35.0	-33	True	AGTAAA	-18
PB.2617.1	chr12	+	2310	15	incomplete-splice_match	SLC4A8	ENST00000319957.10	3834	22	-164	23294	38	-7	3prime_fragment	FALSE	canonical	1	26710	junction_1	9997.424500227802	NA	0	NA	TRUE	NA	NA	NA	A	coding	691	2076	180	2255	50.0	-22	True	AATAAA	-8
PB.6503.15	chr2	-	1775	2	incomplete-splice_match	PELI1	ENST00000494203.1	602	3	0	767	0	-767	3prime_fragment	FALSE	canonical	1	202963	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.6503.14	chr2	-	3413	7	full-splice_match	PELI1	ENST00000358912.4	3750	7	34	303	0	-303	multi-exon	FALSE	canonical	1	202963	junction_6	70162.56523583087	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	410	1666	20.0	-1	True	AAGAAA	-17
PB.11338.1	chr8	+	3889	3	novel_in_catalog	TRIB1	novel	3635	3	NA	NA	-100	-5	combination_of_known_junctions	FALSE	canonical	1	41138	junction_2	182502.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	683	1339	30.0	2	True	AATAAA	-12
PB.6503.10	chr2	-	3369	6	novel_in_catalog	PELI1	novel	3750	7	NA	NA	2	-215	no_combination_of_known_junctions	TRUE	canonical	1	5768	junction_4	145857.3491614324	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	572	1534	50.0	1	True	AGTAAA	-9
PB.10097.11	chr6	+	2351	19	novel_in_catalog	ORC3	novel	2470	19	NA	NA	0	-5	no_combination_of_known_junctions	FALSE	canonical	1	2915	junction_16	78671.06402338148	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	50	1738	30.0	0	True	AATAAA	-18
PB.9805.8	chr6	-	2432	4	full-splice_match	ZNF322	ENST00000415922.6	4817	4	4	2381	4	-473	multi-exon	FALSE	canonical	1	28	junction_3	3225.133623416073	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	643	1851	65.0	-3	True	NA	NA
PB.2022.2	chr11	+	1296	5	novel_in_catalog	NUDT22	novel	746	2	NA	NA	4	0	intron_retention	FALSE	canonical	1	335825	junction_1	92163.76853562087	NA	0	NA	TRUE	NA	NA	NA	B	coding	303	912	360	1271	15.0	-6	True	AATAAA	-16
PB.8395.2	chr3	+	4468	2	full-splice_match	TMCC1-AS1	ENST00000603884.5	556	2	-10	-3902	-10	246	multi-exon	FALSE	canonical	1	42630	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	735	1502	40.0	-4	True	NA	NA
PB.7265.26	chr20	-	4849	17	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	-2	intron_retention	FALSE	canonical	1	212934	junction_1	410562.99009461823	NA	4	NA	TRUE	NA	NA	NA	C	coding	259	780	856	1635	25.0	21	True	AATAAA	-15
PB.10097.12	chr6	+	2126	19	incomplete-splice_match	ORC3	ENST00000392844.7	2512	20	14	1556	0	-1556	3prime_fragment	FALSE	canonical	1	81991	junction_14	71694.07108207057	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	50	2107	30.0	0	True	CATAAA	-19
PB.11520.6	chr9	-	3550	7	novel_in_catalog	FAM214B	novel	2566	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	100648	junction_4	36911.014425085756	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	447	1748	25.0	13	False	AATAAA	-18
PB.6505.11	chr2	+	2942	9	novel_in_catalog	AFTPH	novel	4113	10	NA	NA	-17	-17	intron_retention	FALSE	canonical	1	199375	junction_8	126023.57733748673	NA	0	NA	TRUE	NA	NA	NA	C	coding	908	2727	136	2862	100.0	-9	True	NA	NA
PB.6505.10	chr2	+	3138	10	novel_in_catalog	AFTPH	novel	4113	10	NA	NA	97	-16	intron_retention	FALSE	canonical	1	65902	junction_7	169384.61124579437	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	244	3057	95.0	-156	False	NA	NA
PB.8395.1	chr3	+	3502	3	full-splice_match	TMCC1-AS1	ENST00000605830.6	3556	3	49	5	-11	-5	multi-exon	FALSE	canonical	1	42630	junction_1	537.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	617	955	50.0	-5	True	NA	NA
PB.1484.1	chr10	+	1347	10	full-splice_match	VDAC2	ENST00000332211.10	1557	10	39	171	-14	0	multi-exon	FALSE	canonical	1	696	junction_7	111594.20633009782	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	208	1059	15.0	-36	True	AATAGA	-18
PB.1484.2	chr10	+	1512	10	full-splice_match	VDAC2	ENST00000332211.10	1557	10	43	2	-10	2	multi-exon	FALSE	canonical	1	696	junction_7	111594.20633009782	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	204	1055	35.0	-32	True	AATAAA	-13
PB.1657.10	chr10	-	1785	11	full-splice_match	ZDHHC6	ENST00000369405.7	2170	11	-36	421	-33	3	multi-exon	FALSE	canonical	1	289838	junction_10	48302.27560643494	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	461	1702	20.0	-4	True	ACTAAA	-18
PB.1657.11	chr10	-	2810	10	novel_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-8	-935	combination_of_known_junctions	FALSE	canonical	1	40215	junction_3	112688.96456120512	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	436	1413	15.0	-12	True	TATAAA	-13
PB.8061.10	chr3	-	3028	3	full-splice_match	KIAA1143	ENST00000296121.5	5122	3	-2	2096	-2	-2096	multi-exon	FALSE	canonical	1	334	junction_2	32300.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	63	527	70.0	-3	True	NA	NA
PB.5728.1	chr19	-	1022	4	full-splice_match	ELOF1	ENST00000252445.7	1019	4	-3	0	-3	0	multi-exon	FALSE	canonical	1	892371	junction_3	209894.93541028778	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-10	True	AATAAA	-18
PB.5728.2	chr19	-	1590	4	novel_in_catalog	ELOF1	novel	2154	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	13821	junction_3	603579.5298695571	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	412	891	10.0	-1	True	AATAAA	-14
PB.9979.6	chr6	+	4143	9	full-splice_match	NFYA	ENST00000353205.5	1660	9	-26	-2457	12	431	multi-exon	FALSE	canonical	1	128895	junction_2	58887.72811460806	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	190	1146	15.0	-18	True	AAAACA	-40
PB.11349.1	chr8	-	4619	16	full-splice_match	ZFAT	ENST00000377838.7	4597	16	-20	-2	-9	-2	multi-exon	FALSE	canonical	1	27979	junction_15	60415.91356132	NA	0	NA	TRUE	NA	NA	NA	C	coding	1243	3732	196	3927	15.0	85	False	AATAAA	-16
PB.1211.8	chr1	-	2801	2	full-splice_match	IRF2BP2	ENST00000366610.7	4615	2	316	1498	316	1464	multi-exon	FALSE	canonical	1	999927	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	289	1431	35.0	3562	False	AATAAA	-13
PB.8792.15	chr4	+	1985	9	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	108	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	202491.4622031939	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	54	1172	15.0	0	True	ATTAAA	-15
PB.3547.1	chr14	+	2639	2	full-splice_match	AC005520.2	ENST00000553470.1	538	2	-1764	-337	-159	337	multi-exon	TRUE	canonical	1	34773	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-149	False	NA	NA
PB.8792.17	chr4	+	3153	9	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	122	-2	any annotated donor/acceptor	FALSE	canonical	1	106	junction_4	468898.64036931	NA	4	NA	TRUE	NA	NA	NA	C	coding	430	1293	40	1332	15.0	14	True	ATTAAA	-16
PB.6990.54	chr2	-	8223	47	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1096730	junction_8	2975625.904129083	NA	0	NA	TRUE	NA	NA	NA	C	coding	2421	7266	267	7532	30.0	-1	True	AATAAA	-16
PB.8792.11	chr4	+	2368	9	full-splice_match	PAICS	ENST00000512576.2	6480	9	87	4025	87	-807	multi-exon	FALSE	canonical	1	261279	junction_6	436555.357549518	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	75	1352	40.0	-21	True	AATAAA	-19
PB.8792.10	chr4	+	2013	9	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	17	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	202491.4622031939	NA	4	NA	TRUE	NA	NA	NA	C	coding	372	1119	145	1263	15.0	5	True	ATTAAA	-15
PB.8792.13	chr4	+	2993	8	novel_in_catalog	PAICS	novel	3340	10	NA	NA	108	-2	no_combination_of_known_junctions	FALSE	canonical	1	85409	junction_7	173368.90611840948	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	54	1172	15.0	0	True	ATTAAA	-16
PB.8792.12	chr4	+	1775	10	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	105	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	450690.46799598995	NA	1	1	TRUE	NA	NA	NA	C	coding	425	1278	57	1334	15.0	-3	True	ATTAAA	-15
PB.4641.1	chr17	+	1726	4	full-splice_match	MRM3	ENST00000304478.8	1809	4	81	2	-4	-2	multi-exon	FALSE	canonical	1	146875	junction_3	24004.85288436486	NA	0	NA	TRUE	NA	NA	NA	A	coding	420	1263	26	1288	15.0	1	True	AATAAA	-21
PB.8792.19	chr4	+	2591	8	novel_in_catalog	PAICS	novel	3340	10	NA	NA	137	159	intron_retention	FALSE	canonical	1	271610	junction_4	448076.8758628139	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	25	810	35.0	29	False	AATAAA	-12
PB.8792.18	chr4	+	3287	9	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	135	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	468129.9454316711	NA	3	NA	TRUE	NA	NA	NA	C	coding	261	786	27	812	15.0	27	False	ATTAAA	-16
PB.6990.58	chr2	-	8151	47	novel_not_in_catalog	FN1	novel	8103	45	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	6442	junction_22	2869301.044407003	NA	0	NA	TRUE	NA	NA	NA	C	coding	2397	7194	267	7460	30.0	-1	True	AATAAA	-16
PB.11213.4	chr8	+	2454	16	novel_not_in_catalog	LRRCC1	novel	3813	19	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	6787	junction_3	42373.370724023785	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2292	162	2453	65.0	-30	True	AAAAAG	-22
PB.11213.5	chr8	+	2362	14	incomplete-splice_match	LRRCC1	ENST00000517875.5	2385	15	-30	460	-7	-460	3prime_fragment	FALSE	canonical	1	39014	junction_1	26542.289119742036	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2199	162	2360	55.0	-30	True	AATAAA	-37
PB.11213.6	chr8	+	2565	15	incomplete-splice_match	LRRCC1	ENST00000360375.7	3813	19	64	8462	-4	-460	3prime_fragment	FALSE	canonical	1	25916	junction_1	31562.114576107004	NA	2	NA	TRUE	NA	NA	NA	C	coding	826	2478	86	2563	55.0	-27	True	AATAAA	-37
PB.11213.7	chr8	+	2652	17	novel_not_in_catalog	LRRCC1	novel	3813	19	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	6787	junction_4	43911.817075532184	NA	0	NA	TRUE	NA	NA	NA	C	coding	857	2571	81	2651	65.0	-22	True	AAAAAG	-22
PB.1104.1	chr1	+	1600	5	full-splice_match	LINC00467	ENST00000534914.5	1006	5	-14	-580	3	580	multi-exon	FALSE	canonical	1	19410	junction_4	79709.87651790712	NA	1	NA	TRUE	NA	NA	NA	A	coding	124	375	145	519	5.0	3	True	NA	NA
PB.11213.1	chr8	+	3399	19	full-splice_match	LRRCC1	ENST00000360375.7	3813	19	51	363	-17	-363	multi-exon	TRUE	canonical	1	25916	junction_1	38413.627065297136	NA	1	NA	TRUE	NA	NA	NA	C	coding	1032	3099	99	3197	60.0	-40	True	AATAAA	-22
PB.11213.2	chr8	+	2501	15	full-splice_match	LRRCC1	ENST00000517875.5	2385	15	-20	-96	3	0	multi-exon	FALSE	canonical	1	39014	junction_1	29130.815028846995	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2349	152	2500	80.0	-20	True	NA	NA
PB.6336.2	chr2	-	3314	6	full-splice_match	SDC1	ENST00000381150.5	3291	6	-24	1	-24	-1	multi-exon	FALSE	canonical	1	44719	junction_5	365863.9921508538	NA	1	NA	TRUE	NA	NA	NA	A	coding	310	933	416	1348	15.0	17	True	AATAAA	-20
PB.11213.8	chr8	+	1651	10	incomplete-splice_match	LRRCC1	ENST00000360375.7	3813	19	71	16750	3	-2604	3prime_fragment	FALSE	canonical	1	25916	junction_1	27827.411353147527	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1572	79	1650	70.0	-20	True	NA	NA
PB.10243.1	chr6	+	137	1	incomplete-splice_match	ABRACL	ENST00000367660.3	845	3	14484	0	14324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-6069	False	AATAAA	-23
PB.6259.5	chr19	+	3177	4	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50035	26296	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	26634.87551229695	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	183	2081	10.0	0	True	NA	NA
PB.6259.4	chr19	+	3955	5	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50035	26298	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	26673.72075072205	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	183	2081	5.0	0	True	NA	NA
PB.6259.7	chr19	+	3650	6	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50064	51040	any annotated donor/acceptor	TRUE	canonical	0	0	junction_4	37005.9990520456	NA	1	1	TRUE	NA	NA	NA	C	coding	532	1599	339	1937	90.0	1	True	NA	NA
PB.6259.6	chr19	+	4970	5	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50035	26297	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	34575.67443575757	NA	2	NA	TRUE	NA	NA	NA	C	coding	583	1752	386	2137	10.0	0	True	NA	NA
PB.6259.1	chr19	+	2878	5	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50015	26297	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	34575.67443575757	NA	2	NA	TRUE	NA	NA	NA	C	coding	583	1752	406	2157	10.0	0	True	NA	NA
PB.6259.3	chr19	+	2543	5	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50015	47098	any annotated donor/acceptor	FALSE	canonical	1	21	junction_4	39627.61207478947	NA	8	1	TRUE	NA	NA	NA	C	coding	532	1599	388	1986	85.0	0	True	NA	NA
PB.6259.2	chr19	+	2824	4	novel_not_in_catalog	ZNF586	novel	581	2	NA	NA	50015	26297	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	26634.87551229695	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	203	2101	10.0	0	True	NA	NA
PB.2206.11	chr11	-	3475	18	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	41386	junction_1	433608.9758429089	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	323	2116	25.0	-28	True	AATAAA	-15
PB.2206.10	chr11	-	3412	18	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	56496	junction_2	377971.4077093012	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	304	2052	20.0	-9	True	AATAAA	-16
PB.5079.4	chr17	-	2361	5	novel_not_in_catalog	CBX1	novel	2422	5	NA	NA	39	-9	any annotated donor/acceptor	FALSE	canonical	1	21709	junction_1	138032.30489884425	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	253	669	20.0	-23	True	AATAAA	-14
PB.6259.9	chr19	+	2999	3	full-splice_match	ZNF587	ENST00000339656.7	6882	3	-15	3898	-15	-944	multi-exon	FALSE	canonical	1	899	junction_2	12552.5	NA	16	NA	TRUE	NA	NA	NA	A	coding	575	1728	198	1925	35.0	-17	True	NA	NA
PB.2206.14	chr11	-	2717	15	novel_not_in_catalog	PICALM	novel	3474	20	NA	NA	-8553	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	500172.1857181856	NA	5	1	TRUE	NA	NA	NA	C	coding	432	1299	66	1364	30.0	-3041	False	AATAAA	-14
PB.2206.17	chr11	-	3616	20	novel_in_catalog	PICALM	novel	3474	20	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	360823	junction_3	406542.17864237074	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	316	2259	30.0	-21	True	AATAAA	-13
PB.3557.7	chr14	-	2243	18	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	-3	23	combination_of_known_junctions	FALSE	canonical	1	5881	junction_13	102454.35665413045	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	61	1755	25.0	0	True	ATTAAA	-26
PB.3557.6	chr14	-	2866	19	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	-4	23	combination_of_known_junctions	FALSE	canonical	1	21342	junction_5	98350.10574071527	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	38	1624	25.0	118	False	ATTAAA	-26
PB.3557.5	chr14	-	2242	18	full-splice_match	ABCD4	ENST00000553486.5	1842	18	-27	-373	-3	24	multi-exon	FALSE	canonical	1	50697	junction_16	86946.49292667954	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	410	1753	25.0	0	True	ATTAAA	-27
PB.3557.4	chr14	-	2154	17	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	-3	27	no_combination_of_known_junctions	FALSE	canonical	1	11135	junction_16	90714.81019603329	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	319	1662	25.0	-28	True	ATTAAA	-30
PB.3557.3	chr14	-	2430	16	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	3	28	intron_retention	FALSE	canonical	1	950	junction_2	103897.4440059042	NA	15	1	TRUE	NA	NA	NA	C	coding	506	1521	204	1724	20.0	-1	True	ATTAAA	-31
PB.3557.2	chr14	-	2581	18	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	-11	28	intron_retention	FALSE	canonical	1	86716	junction_16	87186.65068809337	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	97	1875	20.0	59	False	ATTAAA	-31
PB.3557.1	chr14	-	2386	19	full-splice_match	ABCD4	ENST00000356924.8	3003	19	74	543	5	30	multi-exon	FALSE	canonical	1	86716	junction_17	86270.05048747282	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	71	1891	30.0	-10	True	ATTAAA	-33
PB.7042.3	chr2	-	4495	12	full-splice_match	WDFY1	ENST00000233055.8	4660	12	90	75	38	-75	multi-exon	FALSE	canonical	1	288306	junction_11	42286.1560885333	NA	4	NA	TRUE	NA	NA	NA	C	coding	410	1233	14	1246	5.0	1	True	NA	NA
PB.1980.1	chr11	+	2908	12	full-splice_match	FADS2	ENST00000257261.10	2964	12	55	1	55	-1	multi-exon	FALSE	canonical	1	75446	junction_1	561702.7291095861	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	276	1244	10.0	-35	True	AATAAA	-19
PB.8735.13	chr4	-	2655	3	novel_in_catalog	TLR1	novel	619	4	NA	NA	-234	-34	combination_of_known_junctions	FALSE	canonical	1	6011	junction_1	2165.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	141	2501	45.0	4	True	AATATA	-27
PB.1980.3	chr11	+	1499	7	novel_in_catalog	FADS2	novel	2964	12	NA	NA	-79	231	intron_retention	FALSE	canonical	1	5763	junction_6	790686.5745227196	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	292	1206	90.0	-9718	False	NA	NA
PB.1980.2	chr11	+	2949	12	full-splice_match	FADS2	ENST00000522056.5	1689	12	136	-1396	-6	-1	multi-exon	FALSE	canonical	1	18956	junction_1	576627.5146999072	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	44	1285	10.0	-33	True	AATAAA	-19
PB.1980.5	chr11	+	1791	13	novel_not_in_catalog	FADS2	novel	2964	12	NA	NA	19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	563990.5843900577	NA	1	1	TRUE	NA	NA	NA	C	coding	444	1335	93	1427	5.0	-2	True	AATAAA	-20
PB.1980.4	chr11	+	2971	12	full-splice_match	FADS2	ENST00000278840.8	3630	12	658	1	139	-1	multi-exon	FALSE	canonical	1	1374224	junction_1	265280.33976534434	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	339	1307	10.0	-9399	False	AATAAA	-19
PB.1980.7	chr11	+	2672	11	novel_not_in_catalog	FADS2	novel	2964	12	NA	NA	22	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	601200.835238184	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	377	1009	10.0	1	True	AATAAA	-18
PB.1980.6	chr11	+	3446	11	incomplete-splice_match	FADS2	ENST00000278840.8	3630	12	541	3	22	-3	intron_retention	FALSE	canonical	1	1374224	junction_1	277878.5728192262	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	90	1376	5.0	1	True	AATAAA	-17
PB.4350.3	chr16	+	1524	3	full-splice_match	MAZ	ENST00000568544.5	1464	3	-21	-39	-21	0	multi-exon	FALSE	canonical	1	1584179	junction_2	1022541.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-8826	False	AATAAA	-18
PB.4350.2	chr16	+	2220	5	full-splice_match	MAZ	ENST00000322945.10	2532	5	310	2	199	-1	multi-exon	FALSE	canonical	1	767495	junction_1	1187812.978958467	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	528	1289	10.0	0	True	AATAAA	-16
PB.4350.1	chr16	+	2461	6	full-splice_match	MAZ	ENST00000219782.10	2698	6	245	-8	193	8	multi-exon	FALSE	canonical	1	607085	junction_5	1301502.2040809612	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	534	1343	25.0	-6	True	AATAAA	-26
PB.12117.18	chrX	+	2976	6	incomplete-splice_match	MSN	ENST00000360270.6	3944	13	67597	1	67597	-1	5prime_fragment	FALSE	canonical	1	1017765	junction_5	395575.4018250376	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	58	939	25.0	-2	True	AATAAA	-16
PB.7171.3	chr20	+	1640	6	full-splice_match	LAMP5	ENST00000246070.2	2039	6	398	1	398	-1	multi-exon	FALSE	canonical	1	75803	junction_1	15802.436477961239	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	95	937	10.0	-3290	False	AATAAA	-17
PB.7171.2	chr20	+	2001	5	novel_in_catalog	LAMP5	novel	1309	5	NA	NA	411	-1	intron_retention	FALSE	canonical	1	75803	junction_1	15887.013208514054	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	837	1298	10.0	0	True	AATAAA	-17
PB.12117.10	chrX	+	3994	14	novel_not_in_catalog	MSN	novel	568	4	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	5992	junction_2	700040.0030291675	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	257	1957	25.0	1	True	AATAAA	-16
PB.12117.11	chrX	+	3068	1	novel_in_catalog	MSN	novel	568	4	NA	NA	-15	44857	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	73	222	232	453	85.0	1	True	NA	NA
PB.12117.12	chrX	+	5320	12	novel_in_catalog	MSN	novel	568	4	NA	NA	17	-1	intron_retention	FALSE	canonical	1	425017	junction_2	565872.8691808131	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	2093	3283	25.0	-49	False	AATAAA	-16
PB.12117.13	chrX	+	3444	13	full-splice_match	MSN	ENST00000360270.6	3944	13	40	460	40	-460	multi-exon	FALSE	canonical	1	425017	junction_2	545890.7030594014	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	133	1866	20.0	-26	False	AATATA	-15
PB.12117.14	chrX	+	3838	13	novel_not_in_catalog	MSN	novel	568	4	NA	NA	39166	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	635042.1190550354	NA	6	1	TRUE	NA	NA	NA	C	coding	566	1701	101	1801	25.0	9555	False	AATAAA	-16
PB.11203.3	chr8	-	3470	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	-36	607	-21	-480	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	152	706	40.0	1063	False	ATTAAA	-14
PB.11203.2	chr8	-	3921	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	-6	126	-6	1	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	122	676	25.0	-1	True	AATAAA	-17
PB.4704.10	chr17	-	1501	10	incomplete-splice_match	NUP88	ENST00000574867.5	2081	11	-8	3188	6	-89	3prime_fragment	FALSE	canonical	1	413925	junction_5	58155.134359065734	NA	1	1	TRUE	NA	NA	NA	C	coding	493	1479	21	1499	25.0	-9	True	NA	NA
PB.11203.7	chr8	-	2245	7	novel_in_catalog	AC036214.3	novel	1527	8	NA	NA	-90761	-117729	no_combination_of_known_junctions	FALSE	canonical	1	8875	junction_4	406455.49223336455	NA	2	NA	TRUE	NA	NA	NA	B	coding	111	336	94	429	30.0	27	True	AATAAA	-17
PB.11203.6	chr8	-	2243	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	-6	1804	-6	36	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	122	676	25.0	-1	True	NA	NA
PB.11203.5	chr8	-	2623	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	-39	1457	-24	-102	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	155	709	30.0	3	True	AGTAAA	-24
PB.11203.4	chr8	-	3246	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	25	770	23	585	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	91	645	10.0	30	True	AATAAA	-14
PB.11203.9	chr8	-	2169	6	novel_not_in_catalog	AC036214.3	novel	1527	8	NA	NA	-90788	-117731	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	355247.2789118025	NA	3	1	TRUE	NA	NA	NA	B	coding	117	354	121	474	35.0	0	True	AATAAA	-15
PB.11203.8	chr8	-	2145	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	22	1874	20	-28	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	94	648	50.0	27	True	ATTAAA	-21
PB.6840.8	chr2	+	4164	11	full-splice_match	PDK1	ENST00000282077.7	14193	11	155	9874	22	-342	multi-exon	FALSE	canonical	1	168290	junction_1	48804.8633876789	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	28	1338	50.0	34	True	AATAAA	-27
PB.7629.7	chr22	+	3917	4	incomplete-splice_match	SNAP29	ENST00000215730.11	4287	5	11352	7	10852	-7	5prime_fragment	FALSE	canonical	1	523567	junction_1	35402.592224612905	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	45	542	25.0	NA	False	AATAAA	-16
PB.182.6	chr1	-	2027	1	novel_in_catalog	RSRP1	novel	3034	6	NA	NA	260	32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.182.1	chr1	-	2901	2	full-splice_match	RSRP1	ENST00000568399.1	629	2	-623	-1649	244	1649	multi-exon	FALSE	canonical	1	3958	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	2033	2356	25.0	NA	False	NA	NA
PB.182.3	chr1	-	5638	1	genic	RSRP1_AL928711.1	novel	NA	NA	NA	NA	-31	2761	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	138	417	4504	4920	35.0	NA	False	NA	NA
PB.10010.7	chr6	+	3880	3	full-splice_match	C6orf223	ENST00000442114.6	3109	3	34	-805	-3	-3	multi-exon	FALSE	canonical	1	71025	junction_2	382.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	383	1051	25.0	29	True	NA	NA
PB.10010.4	chr6	+	3637	4	full-splice_match	C6orf223	ENST00000439969.2	2757	4	-32	-848	5	-2	multi-exon	FALSE	canonical	1	24733	junction_1	22004.786696433926	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	36	353	20.0	0	True	NA	NA
PB.7422.6	chr20	+	4326	11	novel_in_catalog	ZGPAT	novel	1881	7	NA	NA	5	2962	intron_retention	FALSE	canonical	1	131582	junction_8	91873.70095930608	NA	19	NA	TRUE	NA	NA	NA	C	coding	511	1536	104	1639	10.0	5	True	AATAAA	-24
PB.10010.5	chr6	+	3092	3	full-splice_match	C6orf223	ENST00000442114.6	3109	3	5	12	5	-12	multi-exon	FALSE	canonical	1	71025	junction_2	382.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	412	1080	35.0	0	True	AATGAA	-8
PB.7422.7	chr20	+	1921	7	full-splice_match	ZGPAT	ENST00000369967.7	1890	7	-33	2	0	-1	multi-exon	FALSE	canonical	1	36354	junction_1	134770.39513887643	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	165	1700	25.0	14	True	ATTAAA	-19
PB.4581.17	chr16	-	4632	10	novel_in_catalog	TAF1C	novel	3502	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	123487	junction_9	54579.09160538617	NA	11	NA	TRUE	NA	NA	NA	C	coding	448	1347	3097	4443	15.0	-21	True	AATACA	-15
PB.8523.5	chr3	-	3541	5	full-splice_match	NCEH1	ENST00000475381.5	4687	5	125	1021	19	-625	multi-exon	FALSE	canonical	1	158311	junction_4	30089.86244048816	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	14	1336	75.0	-29	True	NA	NA
PB.2835.1	chr12	+	1567	9	full-splice_match	CHPT1	ENST00000229266.7	1585	9	15	3	15	-3	multi-exon	FALSE	canonical	1	528099	junction_1	141003.51205593915	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	221	1441	25.0	2	True	AATAAA	-19
PB.7422.4	chr20	+	1917	7	novel_in_catalog	ZGPAT	novel	1881	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11392	junction_1	143408.45902293676	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	160	1695	25.0	0	True	ATTAAA	-20
PB.2835.2	chr12	+	1967	8	full-splice_match	CHPT1	ENST00000549872.5	2001	8	22	12	2	-12	multi-exon	FALSE	canonical	1	528099	junction_1	147042.35604916632	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	169	1365	55.0	-160	False	AATAAA	-33
PB.7422.5	chr20	+	1866	7	full-splice_match	ZGPAT	ENST00000355969.10	1871	7	4	1	0	0	multi-exon	FALSE	canonical	1	210983	junction_1	78699.21045223741	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	109	1644	25.0	0	True	ATTAAA	-20
PB.7422.2	chr20	+	2838	6	full-splice_match	ZGPAT	ENST00000477340.5	2831	6	0	-7	0	6	multi-exon	FALSE	canonical	1	210983	junction_1	79981.30839489937	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	109	1065	20.0	0	True	ATTAAA	-27
PB.4581.14	chr16	-	3297	15	full-splice_match	TAF1C	ENST00000566732.5	2972	15	6	-331	0	331	multi-exon	FALSE	canonical	1	123487	junction_14	60403.128164577094	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	206	2737	25.0	3	True	AATACA	-18
PB.7422.3	chr20	+	1926	7	novel_in_catalog	ZGPAT	novel	1881	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	15453	junction_4	146735.469422586	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	109	1704	25.0	0	True	ATTAAA	-20
PB.9357.32	chr5	+	6346	18	full-splice_match	LNPEP	ENST00000231368.9	12752	18	619	5787	619	2692	multi-exon	FALSE	canonical	1	122352	junction_7	34977.82487940206	NA	2	NA	TRUE	NA	NA	NA	C	coding	1025	3078	74	3151	60.0	3	True	NA	NA
PB.7422.1	chr20	+	3165	5	novel_in_catalog	ZGPAT	novel	1881	7	NA	NA	0	0	intron_retention	TRUE	canonical	1	210983	junction_1	76033.24818911462	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	109	1065	25.0	0	True	ATTAAA	-20
PB.10157.9	chr6	-	2231	1	novel_in_catalog	CDK19	novel	6067	14	NA	NA	-75	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	24	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-22	True	AATAAA	-17
PB.10157.2	chr6	-	6292	14	novel_in_catalog	CDK19	novel	6007	12	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	16397	junction_13	67512.77403625929	NA	4	NA	TRUE	NA	NA	NA	B	coding	442	1329	407	1735	15.0	1	True	AATAAA	-16
PB.10157.3	chr6	-	6280	12	novel_in_catalog	CDK19	novel	6007	12	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	1	12080	junction_8	65267.63141022376	NA	2	NA	TRUE	NA	NA	NA	B	coding	244	735	989	1723	15.0	60	True	AATAAA	-16
PB.10157.4	chr6	-	6202	14	novel_not_in_catalog	CDK19	novel	6007	12	NA	NA	-155	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	64011.28430373053	NA	2	NA	TRUE	NA	NA	NA	B	coding	502	1509	137	1645	15.0	-3	True	AATAAA	-16
PB.10157.6	chr6	-	6085	13	novel_not_in_catalog	CDK19	novel	6007	12	NA	NA	-111	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	76317.44651395068	NA	10	2	TRUE	NA	NA	NA	B	coding	382	1149	381	1529	10.0	41	True	AATAAA	-15
PB.3245.1	chr13	-	1158	6	full-splice_match	TEX30	ENST00000376032.8	1165	6	2	5	2	-5	multi-exon	FALSE	canonical	1	126457	junction_5	83262.82180517305	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	189	872	30.0	-24	True	ATTAAA	-18
PB.11178.1	chr8	-	1525	7	full-splice_match	LACTB2	ENST00000276590.4	1508	7	-26	9	-9	-9	multi-exon	FALSE	canonical	1	264883	junction_1	50581.63095323132	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	64	930	45.0	-9	True	AATGAA	-43
PB.11427.4	chr9	+	3076	18	full-splice_match	VLDLR	ENST00000382099.2	3240	18	33	131	33	-131	multi-exon	FALSE	canonical	1	82941	junction_1	50094.742116407215	NA	1	NA	TRUE	NA	NA	NA	C	coding	845	2538	58	2595	65.0	6	True	NA	NA
PB.11288.2	chr8	+	3343	3	novel_in_catalog	CTHRC1	novel	1271	4	NA	NA	-9	-4	intron_retention	FALSE	canonical	1	285091	junction_1	102130.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	152	595	40.0	-12	True	AATAAA	-20
PB.11427.3	chr9	+	4825	18	full-splice_match	VLDLR	ENST00000382099.2	3240	18	37	-1622	37	1622	multi-exon	FALSE	canonical	1	82941	junction_1	50094.742116407215	NA	3	NA	TRUE	NA	NA	NA	C	coding	845	2538	54	2591	15.0	10	True	AATAAA	-19
PB.4597.1	chr16	-	1901	12	full-splice_match	KLHDC4	ENST00000270583.9	1886	12	-22	7	1	-4	multi-exon	FALSE	canonical	1	121123	junction_9	45543.3813019326	NA	0	NA	TRUE	NA	NA	NA	A	coding	520	1563	82	1644	40.0	-11	True	AATAAA	-10
PB.3245.2	chr13	-	1629	1	novel_in_catalog	TEX30	novel	1165	6	NA	NA	25	-3881	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.5881.1	chr19	+	1780	1	full-splice_match	ZNF493	ENST00000599461.1	1769	1	-74	63	-27	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-76	False	AATATA	-3
PB.5881.3	chr19	+	1718	2	novel_not_in_catalog	ZNF493	novel	546	5	NA	NA	-2	-63	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-16	True	AATATA	-3
PB.5881.2	chr19	+	4455	4	novel_in_catalog	ZNF493	novel	546	5	NA	NA	-12	-183	combination_of_known_junctions	FALSE	canonical	1	22615	junction_3	4125.105278117827	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	132	2459	50.0	-26	True	NA	NA
PB.11509.3	chr9	+	2591	6	full-splice_match	UBAP1	ENST00000625521.2	2029	6	27	-589	-6	-81	multi-exon	FALSE	canonical	1	21958	junction_1	226088.40419322703	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	479	1684	40.0	-9417	False	ATTAAA	-17
PB.402.14	chr1	+	2977	21	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	0	-67	combination_of_known_junctions	FALSE	canonical	1	2354	junction_5	285325.11779373715	NA	2	NA	TRUE	NA	NA	NA	C	coding	550	1653	717	2369	40.0	-24	True	ATTAAA	-17
PB.8955.8	chr4	+	2302	14	novel_in_catalog	USP53	novel	4233	2	NA	NA	30	-1645	combination_of_known_junctions	FALSE	canonical	1	16990	junction_3	48579.599728436915	NA	2	2	TRUE	NA	NA	NA	B	coding	435	1305	997	2301	65.0	-3	True	NA	NA
PB.12147.11	chrX	-	3089	4	full-splice_match	RLIM	ENST00000332687.10	8317	4	0	5228	0	-327	multi-exon	FALSE	canonical	1	67475	junction_1	26827.238102760824	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	220	2094	50.0	4	True	NA	NA
PB.12147.10	chrX	-	4189	5	full-splice_match	RLIM	ENST00000349225.2	3478	5	10	-721	10	721	multi-exon	FALSE	canonical	1	32435	junction_4	37999.33350731299	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	272	2146	30.0	14	False	AATACA	-20
PB.12147.13	chrX	-	2925	5	full-splice_match	RLIM	ENST00000349225.2	3478	5	2	551	2	-551	multi-exon	FALSE	canonical	1	32435	junction_4	37999.33350731299	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	280	2154	40.0	6	True	ATTAAA	-21
PB.12147.12	chrX	-	4123	3	novel_in_catalog	RLIM	novel	8317	4	NA	NA	-14	-551	intron_retention	FALSE	canonical	1	110498	junction_2	10752.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	2180	3352	40.0	-10	True	ATTAAA	-21
PB.12147.15	chrX	-	2337	5	full-splice_match	RLIM	ENST00000349225.2	3478	5	9	1132	9	-1132	multi-exon	FALSE	canonical	1	32435	junction_4	37999.33350731299	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	273	2147	45.0	13	False	AATAAA	-20
PB.12147.14	chrX	-	2784	4	full-splice_match	RLIM	ENST00000332687.10	8317	4	-6	5539	-6	-638	multi-exon	FALSE	canonical	1	67475	junction_1	26827.238102760824	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	226	2100	45.0	-2	True	AAAAAG	-43
PB.7456.11	chr21	+	2257	5	novel_not_in_catalog	BAGE2	novel	1482	3	NA	NA	11	3281	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	13	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-9	True	AATAAA	-16
PB.12147.16	chrX	-	2280	4	full-splice_match	RLIM	ENST00000332687.10	8317	4	0	6037	0	-1136	multi-exon	FALSE	canonical	1	67475	junction_1	26827.238102760824	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	220	2094	35.0	4	True	AATAAA	-16
PB.1271.16	chr10	+	1713	14	incomplete-splice_match	PFKP	ENST00000381075.6	2769	24	40072	-12	3820	3	5prime_fragment	FALSE	canonical	1	1379447	junction_5	285163.51851764094	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	105	1487	10.0	3755	False	ATTAAA	-23
PB.1271.17	chr10	+	4061	6	full-splice_match	PFKP	ENST00000381072.5	1698	6	-2356	-7	-2356	-2	multi-exon	FALSE	canonical	1	1422619	junction_4	352588.0404871385	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	3232	3840	20.0	4811	False	ATTAAA	-18
PB.1271.10	chr10	+	2784	22	novel_in_catalog	PFKP	novel	432	4	NA	NA	-156	5	combination_of_known_junctions	FALSE	canonical	1	16042	junction_1	482879.2230627098	NA	2	1	TRUE	NA	NA	NA	C	coding	736	2211	346	2556	15.0	1503	False	ATTAAA	-25
PB.9805.2	chr6	-	4489	5	novel_not_in_catalog	ZNF322	novel	4817	4	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	28	junction_4	3276.881320325776	NA	4	NA	TRUE	NA	NA	NA	C	coding	402	1209	635	1843	15.0	5	True	AATAAA	-21
PB.5185.4	chr17	-	3335	8	novel_in_catalog	POLG2	novel	1564	8	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	14712	junction_3	54160.12131350776	NA	10	NA	TRUE	NA	NA	NA	C	coding	377	1134	78	1211	15.0	6	True	AATAAA	-15
PB.1132.18	chr1	-	4421	35	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	-7	87	any annotated donor/acceptor	FALSE	canonical	1	133931	junction_18	49345.423857869566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1393	4182	85	4266	30.0	8	True	AATAAA	-30
PB.11098.2	chr8	+	4965	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	3198	junction_1	177774.69324814226	NA	5	NA	TRUE	NA	NA	NA	C	coding	581	1746	468	2213	100.0	0	True	NA	NA
PB.5185.1	chr17	-	1582	8	full-splice_match	POLG2	ENST00000539111.6	1564	8	-19	1	-19	-1	multi-exon	FALSE	canonical	1	95800	junction_4	29510.800646128024	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	88	1545	15.0	-4	True	AATAAA	-16
PB.5185.2	chr17	-	4307	7	novel_in_catalog	POLG2	novel	1564	8	NA	NA	-17	0	intron_retention	FALSE	canonical	1	95800	junction_3	31873.939755787258	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	86	1219	15.0	-2	True	AATAAA	-15
PB.5185.3	chr17	-	3460	9	novel_not_in_catalog	POLG2	novel	1564	8	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	1	12955	junction_4	61411.67732898504	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	86	1219	15.0	-2	True	AATAAA	-15
PB.7898.1	chr22	-	2294	8	full-splice_match	ARSA	ENST00000453344.6	1650	8	21	-665	3	654	multi-exon	FALSE	canonical	1	15144	junction_7	142006.13013413706	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	248	1513	15.0	-6	True	NA	NA
PB.10377.5	chr7	+	3387	16	novel_in_catalog	AP5Z1	novel	2667	16	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	155878	junction_5	51374.52152116737	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	71	1879	35.0	11	True	AGTAAA	-14
PB.7898.2	chr22	-	2046	8	full-splice_match	ARSA	ENST00000216124.9	2050	8	0	4	0	-4	multi-exon	FALSE	canonical	1	222400	junction_7	90444.19215162013	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	394	1923	25.0	-26	True	NA	NA
PB.5910.2	chr19	-	1759	15	full-splice_match	PEPD	ENST00000244137.11	1910	15	4	147	1	-73	multi-exon	FALSE	canonical	1	106395	junction_14	234273.69088089935	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	31	1512	35.0	0	True	ATTAAA	-20
PB.5910.3	chr19	-	2931	12	incomplete-splice_match	PEPD	ENST00000244137.11	1910	15	5	12836	-1	2020	3prime_fragment	FALSE	canonical	1	106395	junction_11	241653.7868928457	NA	1	1	TRUE	NA	NA	NA	C	coding	333	1002	30	1031	75.0	1	True	NA	NA
PB.10377.2	chr7	+	2947	16	novel_in_catalog	AP5Z1	novel	2667	16	NA	NA	5	0	intron_retention	FALSE	canonical	1	155878	junction_5	53992.26441860805	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	90	2582	40.0	-8	True	AGTAAA	-15
PB.5910.1	chr19	-	1908	15	full-splice_match	PEPD	ENST00000244137.11	1910	15	3	-1	0	1	multi-exon	TRUE	canonical	1	106395	junction_14	234273.69088089935	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	32	1513	0.0	-1	True	AATAAA	-20
PB.6047.6	chr19	-	3588	10	novel_not_in_catalog	ZNF45	novel	3898	10	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	231	junction_8	36447.35404205176	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	785	2833	25.0	-15	True	NA	NA
PB.3375.5	chr14	+	3495	9	novel_in_catalog	AKAP6	novel	15006	14	NA	NA	-19	384	combination_of_known_junctions	FALSE	canonical	1	405	junction_1	20772.828562812527	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	526	3027	70.0	-22	True	NA	NA
PB.3375.4	chr14	+	2913	3	full-splice_match	AKAP6	ENST00000556638.1	876	3	-1108	-929	-307	0	multi-exon	FALSE	canonical	1	8178	junction_1	19212.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1068	1844	2911	75.0	-1406	False	NA	NA
PB.2098.4	chr11	+	4877	10	full-splice_match	KDM2A	ENST00000530342.2	3651	10	71	-1297	71	0	multi-exon	FALSE	canonical	1	109518	junction_1	179201.6465496307	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	91	2262	15.0	-6989	False	AATAAA	-23
PB.3375.6	chr14	+	8202	14	novel_not_in_catalog	AKAP6	novel	15006	14	NA	NA	-249	-10	any annotated donor/acceptor	FALSE	canonical	1	172	junction_1	24735.517636499182	NA	4	NA	TRUE	NA	NA	NA	C	coding	2077	6234	967	7200	50.0	-1348	False	AATAAA	-17
PB.2098.2	chr11	+	3409	10	full-splice_match	KDM2A	ENST00000530342.2	3651	10	220	22	-34	-22	multi-exon	FALSE	canonical	1	109518	junction_1	179201.6465496307	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	251	2113	85.0	-6840	False	NA	NA
PB.2098.3	chr11	+	5174	10	full-splice_match	KDM2A	ENST00000530342.2	3651	10	82	-1605	82	-109	multi-exon	FALSE	canonical	1	109518	junction_1	179201.6465496307	NA	9	NA	TRUE	NA	NA	NA	C	coding	723	2172	80	2251	60.0	-6978	False	AATAAA	-14
PB.3375.3	chr14	+	5260	10	novel_not_in_catalog	AKAP6	novel	15006	14	NA	NA	-14790	-1	any annotated donor/acceptor	FALSE	canonical	1	2188	junction_1	19648.26952390339	NA	2	1	TRUE	NA	NA	NA	C	coding	1072	3219	111	3329	25.0	2	True	AATAAA	-18
PB.2098.1	chr11	+	5100	10	incomplete-splice_match	KDM2A	ENST00000531696.5	4160	14	15976	-1697	122	-16	5prime_fragment	FALSE	canonical	1	253725	junction_1	144248.72027427293	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	222	2084	65.0	-8408	False	AATAAA	-9
PB.5460.5	chr18	-	9660	44	full-splice_match	EPG5	ENST00000649336.1	12698	44	-1	3039	-1	-3039	multi-exon	TRUE	canonical	1	59311	junction_33	26568.086737784415	NA	0	NA	TRUE	NA	NA	NA	C	coding	2579	7740	102	7841	50.0	-19	True	AATAAA	-19
PB.6047.5	chr19	-	4116	12	novel_not_in_catalog	ZNF45	novel	3898	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	16237	junction_9	28553.910465574292	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	1313	3361	25.0	3	True	NA	NA
PB.11509.1	chr9	+	2478	6	full-splice_match	UBAP1	ENST00000626262.2	1753	6	5	-730	5	-92	multi-exon	FALSE	canonical	1	14170	junction_2	233208.43960080005	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	230	1582	55.0	3	True	ATTAAA	-6
PB.9654.1	chr5	+	1663	6	full-splice_match	B4GALT7	ENST00000029410.9	1747	6	10	74	10	7	multi-exon	FALSE	canonical	1	118423	junction_1	97628.77633280058	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	102	1085	25.0	-44	True	NA	NA
PB.9654.2	chr5	+	4154	7	novel_not_in_catalog	B4GALT7	novel	1747	6	NA	NA	-8	3200	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	136086.55049483522	NA	2	1	TRUE	NA	NA	NA	C	coding	327	984	58	1041	55.0	0	True	NA	NA
PB.8701.4	chr4	-	1620	6	incomplete-splice_match	RAB28	ENST00000338176.8	1787	8	27	7961	-7	-7185	3prime_fragment	FALSE	canonical	1	150365	junction_3	27395.201886461797	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	189	830	30.0	-11	True	ATTAAA	-16
PB.8701.1	chr4	-	1786	8	full-splice_match	RAB28	ENST00000288723.8	1810	8	23	1	-11	0	multi-exon	FALSE	canonical	1	42921	junction_2	64203.52936099513	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	193	855	15.0	-15	True	AATAAA	-13
PB.8701.3	chr4	-	1690	7	full-splice_match	RAB28	ENST00000330852.9	1715	7	23	2	-11	-1	multi-exon	FALSE	canonical	1	99189	junction_1	39366.14000388602	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	193	858	15.0	-15	True	AATAAA	-12
PB.8701.2	chr4	-	1756	8	full-splice_match	RAB28	ENST00000338176.8	1787	8	30	1	-4	-1	multi-exon	FALSE	canonical	1	4287	junction_2	82901.15854166949	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	186	800	15.0	-8	True	AATAAA	-12
PB.9737.1	chr6	-	3294	2	full-splice_match	ERVFRD-1	ENST00000472091.1	3198	2	-98	2	-98	0	multi-exon	FALSE	canonical	1	10937	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	538	1617	475	2091	25.0	14	True	NA	NA
PB.1573.10	chr10	-	3297	31	full-splice_match	MMS19	ENST00000438925.6	3797	31	317	183	-4	-181	multi-exon	FALSE	canonical	1	189945	junction_30	143776.50179072688	NA	0	NA	TRUE	NA	NA	NA	C	coding	1030	3093	20	3112	40.0	-1	True	NA	NA
PB.11509.6	chr9	+	2822	8	novel_not_in_catalog	UBAP1	novel	2029	6	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	5612	junction_2	247982.19482380716	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	324	1832	20.0	-6	True	AATAAA	-13
PB.11656.9	chr9	+	4131	18	novel_not_in_catalog	FAM120A	novel	5118	18	NA	NA	1308	-413	any annotated donor/acceptor	FALSE	canonical	1	1650	junction_1	296281.2758519924	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	275	2977	70.0	2	True	NA	NA
PB.11656.8	chr9	+	3126	18	novel_not_in_catalog	FAM120A	novel	5118	18	NA	NA	1306	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	341327.7321900058	NA	1	1	TRUE	NA	NA	NA	C	coding	903	2712	215	2926	80.0	0	True	TTTAAA	-43
PB.11656.5	chr9	+	4160	18	full-splice_match	FAM120A	ENST00000277165.10	5118	18	545	413	-117	-413	multi-exon	FALSE	canonical	1	7977	junction_6	235732.21624590817	NA	1	1	TRUE	NA	NA	NA	C	coding	975	2928	79	3006	70.0	-1423	False	NA	NA
PB.724.3	chr1	+	2266	17	novel_in_catalog	TARS2	novel	2188	14	NA	NA	-12	-13	no_combination_of_known_junctions	FALSE	canonical	1	18802	junction_7	84768.48451222896	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	50	2059	60.0	-33	True	AATGAA	-6
PB.8733.4	chr4	+	3289	6	full-splice_match	KLF3	ENST00000261438.9	5122	6	-145	1978	-145	-1978	multi-exon	FALSE	canonical	1	164290	junction_1	88321.4765691788	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	451	1488	35.0	-3504	False	AATAAA	-22
PB.8733.5	chr4	+	2851	6	full-splice_match	KLF3	ENST00000261438.9	5122	6	3	2268	2	-2268	multi-exon	FALSE	canonical	1	164290	junction_1	88321.4765691788	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	303	1340	25.0	0	True	AATAAA	-14
PB.8712.11	chr4	+	4773	18	incomplete-splice_match	NCAPG	ENST00000251496.6	4661	21	89	2734	-31	-1320	intron_retention	FALSE	canonical	1	167764	junction_4	83670.7045882702	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	88	2937	0.0	-1	True	AATAAA	-16
PB.8712.10	chr4	+	3711	20	novel_in_catalog	NCAPG	novel	4661	21	NA	NA	-33	60	intron_retention	FALSE	canonical	1	9042	junction_10	148891.05893801752	NA	2	1	TRUE	NA	NA	NA	C	coding	622	1869	1760	3628	30.0	-3	True	AATAAA	-27
PB.11656.3	chr9	+	4438	19	novel_not_in_catalog	FAM120A	novel	5118	18	NA	NA	83	-433	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	317892.44099837344	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	170	3304	45.0	4	True	NA	NA
PB.8712.12	chr4	+	3399	1	novel_in_catalog	NCAPG	novel	4661	21	NA	NA	-20	1054	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	82	249	77	325	80.0	10	True	NA	NA
PB.8459.1	chr3	+	2012	7	full-splice_match	HPS3	ENST00000486530.1	1894	7	-88	-30	19	4	multi-exon	FALSE	canonical	1	157291	junction_1	44361.367538846986	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	122	1525	20.0	-132	False	AATAAA	-21
PB.8054.2	chr3	-	8361	8	full-splice_match	ZNF445	ENST00000396077.7	18299	8	16	9922	-5	-1872	multi-exon	FALSE	canonical	1	32	junction_6	33163.868240811076	NA	1	NA	TRUE	NA	NA	NA	C	coding	1031	3096	333	3428	25.0	-1	True	AGTAAA	-17
PB.8252.14	chr3	-	1788	9	novel_in_catalog	RIOX2	novel	5347	10	NA	NA	20	-1	intron_retention	FALSE	canonical	1	87743	junction_8	92013.51419280417	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	91	1344	10.0	-16	True	AATAAA	-18
PB.8054.3	chr3	-	4928	1	incomplete-splice_match	ZNF445	ENST00000396077.7	18299	8	31100	9923	9130	-1873	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	112	339	1262	1600	25.0	-6675	False	AGTAAA	-16
PB.8252.12	chr3	-	2008	10	full-splice_match	RIOX2	ENST00000333396.11	5347	10	36	3303	30	56	multi-exon	FALSE	canonical	1	27874	junction_9	102887.82001712614	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	548	1945	35.0	-6	True	ATTAAA	-17
PB.8252.13	chr3	-	1529	10	novel_in_catalog	RIOX2	novel	5347	10	NA	NA	20	37	combination_of_known_junctions	FALSE	canonical	1	81363	junction_4	107732.34514810819	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	91	1485	60.0	-16	True	NA	NA
PB.8252.10	chr3	-	2327	10	full-splice_match	RIOX2	ENST00000333396.11	5347	10	17	3003	11	-261	multi-exon	FALSE	canonical	1	27874	junction_9	102887.82001712614	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	567	1964	75.0	-25	True	AAGAAA	-41
PB.8252.11	chr3	-	1858	10	full-splice_match	RIOX2	ENST00000394198.6	2341	10	21	462	21	-253	multi-exon	FALSE	canonical	1	87743	junction_9	87634.62084102731	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	90	1487	70.0	-15	True	TTTAAA	-36
PB.11509.7	chr9	+	2703	7	full-splice_match	UBAP1	ENST00000297661.8	2735	7	31	1	-1	0	multi-exon	FALSE	canonical	1	342055	junction_1	111316.6446309306	NA	2	NA	TRUE	NA	NA	NA	C	coding	502	1509	205	1713	20.0	-3	True	AATAAA	-13
PB.11462.2	chr9	-	2589	20	full-splice_match	TTC39B	ENST00000512701.6	10483	20	126	7768	-25	174	multi-exon	FALSE	canonical	1	43241	junction_19	16097.174240416105	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	110	1960	25.0	-20	True	ATTAAA	-20
PB.11462.1	chr9	-	3025	20	full-splice_match	TTC39B	ENST00000512701.6	10483	20	149	7309	-2	-86	multi-exon	FALSE	canonical	1	43241	junction_19	16097.174240416105	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	87	1937	20.0	3	True	NA	NA
PB.9548.6	chr5	+	4000	22	novel_not_in_catalog	FBXO38	novel	3680	21	NA	NA	5	-267	any annotated donor/acceptor	FALSE	canonical	1	11781	junction_15	62179.28933509684	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3441	147	3587	0.0	-1	True	AGTAAA	-14
PB.9158.1	chr5	-	2019	2	novel_not_in_catalog	LINC02100	novel	238	2	NA	NA	-23	-27359	any annotated donor/acceptor	FALSE	canonical	1	6867	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	5	True	NA	NA
PB.3369.6	chr14	-	9352	43	full-splice_match	HECTD1	ENST00000399332.5	9134	43	-219	1	7	-1	multi-exon	FALSE	canonical	1	129720	junction_42	152055.52418736945	NA	0	NA	TRUE	NA	NA	NA	C	coding	2610	7833	709	8541	30.0	-24	True	ATTAAA	-13
PB.3369.7	chr14	-	8831	43	full-splice_match	HECTD1	ENST00000553700.5	9080	43	248	1	-73	-1	multi-exon	FALSE	canonical	1	102057	junction_42	153416.50805119338	NA	5	NA	TRUE	NA	NA	NA	C	coding	2610	7833	188	8020	30.0	600	False	ATTAAA	-13
PB.3369.2	chr14	-	8930	43	novel_in_catalog	HECTD1	novel	3748	18	NA	NA	11	2	intron_retention	FALSE	canonical	1	102057	junction_42	154842.90621113894	NA	2	NA	TRUE	NA	NA	NA	C	coding	2563	7692	425	8116	30.0	-1	True	ATTAAA	-16
PB.3369.3	chr14	-	6567	31	novel_in_catalog	HECTD1	novel	3748	18	NA	NA	-13382	2	intron_retention	FALSE	canonical	1	93603	junction_16	165928.96603513806	NA	0	NA	TRUE	NA	NA	NA	C	coding	1857	5574	180	5753	30.0	6746	False	ATTAAA	-16
PB.6714.3	chr2	+	3324	27	full-splice_match	PTPN4	ENST00000263708.6	10300	27	215	6761	-108	-26	multi-exon	FALSE	canonical	1	68379	junction_11	27714.53288748698	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2766	557	3322	70.0	-361	False	NA	NA
PB.1164.5	chr1	-	3096	8	full-splice_match	ACBD3	ENST00000366812.5	3573	8	218	259	218	-259	multi-exon	FALSE	canonical	1	296097	junction_7	94151.75577670729	NA	3	NA	TRUE	NA	NA	NA	C	coding	408	1227	198	1424	30.0	205	False	AATAAA	-20
PB.11509.4	chr9	+	2741	8	novel_not_in_catalog	UBAP1	novel	2029	6	NA	NA	-6	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	251176.11919795827	NA	9	2	TRUE	NA	NA	NA	C	coding	502	1509	335	1843	45.0	-9417	False	ATTAAA	-8
PB.6489.12	chr2	-	4420	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-91	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	332	3535	20.0	-26	True	AATAAA	-15
PB.7418.5	chr20	-	4306	10	novel_not_in_catalog	GMEB2	novel	4011	8	NA	NA	-34	-8	any annotated donor/acceptor	FALSE	canonical	1	3046	junction_2	66297.18640101823	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	178	1827	20.0	-1	True	AATAAA	-9
PB.6489.10	chr2	-	4637	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	5	NA	TRUE	NA	NA	NA	C	coding	1067	3204	548	3751	15.0	-20	True	AATAAA	-16
PB.6489.11	chr2	-	4688	23	novel_in_catalog	XPO1	novel	4915	25	NA	NA	0	0	intron_retention	FALSE	canonical	1	8423	junction_19	383236.8408027187	NA	2	NA	TRUE	NA	NA	NA	C	coding	904	2715	1088	3802	15.0	-3	True	AATAAA	-16
PB.8955.9	chr4	+	4633	16	novel_in_catalog	USP53	novel	4233	2	NA	NA	31	-203	no_combination_of_known_junctions	FALSE	canonical	1	24449	junction_2	46071.53729273157	NA	0	NA	TRUE	NA	NA	NA	B	coding	957	2874	536	3409	50.0	-2	True	ATTAAA	-20
PB.6489.14	chr2	-	4075	25	novel_in_catalog	XPO1	novel	4915	25	NA	NA	62	0	no_combination_of_known_junctions	FALSE	canonical	1	1187	junction_24	436385.53494172246	NA	0	NA	TRUE	NA	NA	NA	C	coding	1027	3084	106	3189	15.0	47	False	AATAAA	-16
PB.596.1	chr1	-	3245	1	incomplete-splice_match	AMIGO1	ENST00000369864.4	5088	2	2261	2	2261	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	2305	False	ATTAAA	-27
PB.10173.6	chr6	-	1786	14	full-splice_match	HDAC2	ENST00000519065.5	9874	14	111	7977	-17	-287	multi-exon	FALSE	canonical	1	736423	junction_13	481765.45923442964	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	267	1733	30.0	-39	True	ATTAAA	-18
PB.5223.6	chr17	-	2329	4	full-splice_match	FAM104A	ENST00000405159.7	2865	4	90	446	39	-446	multi-exon	FALSE	canonical	1	121393	junction_1	146613.0421233618	NA	5	NA	TRUE	NA	NA	NA	C	coding	141	426	174	599	40.0	-3	True	AATAAA	-20
PB.5223.5	chr17	-	2302	3	full-splice_match	FAM104A	ENST00000403627.7	2798	3	50	446	3	-446	multi-exon	FALSE	canonical	1	303396	junction_1	77555.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	210	572	40.0	-39	True	AATAAA	-20
PB.10173.5	chr6	-	2149	15	novel_in_catalog	HDAC2	novel	9874	14	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	3946	junction_13	674627.5624461096	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	433	1809	15.0	-52	True	ATTAAA	-14
PB.5223.3	chr17	-	2789	4	full-splice_match	FAM104A	ENST00000405159.7	2865	4	62	14	11	-14	multi-exon	FALSE	canonical	1	121393	junction_1	146613.0421233618	NA	3	NA	TRUE	NA	NA	NA	C	coding	141	426	202	627	15.0	-31	True	ATTAAA	-14
PB.5223.2	chr17	-	2471	2	full-splice_match	FAM104A	ENST00000581110.1	512	2	249	-2208	175	-5	multi-exon	FALSE	canonical	1	23933	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	408	2064	2471	30.0	6	True	ATTAAA	-23
PB.5223.1	chr17	-	2760	3	full-splice_match	FAM104A	ENST00000403627.7	2798	3	25	13	-22	-13	multi-exon	FALSE	canonical	1	303396	junction_1	77555.5	NA	9	NA	TRUE	NA	NA	NA	C	coding	120	363	235	597	20.0	-64	True	ATTAAA	-15
PB.10173.1	chr6	-	3848	14	full-splice_match	HDAC2	ENST00000519065.5	9874	14	121	5905	-7	1785	multi-exon	FALSE	canonical	1	736423	junction_13	481765.45923442964	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	257	1723	20.0	-29	True	NA	NA
PB.8517.14	chr3	-	4690	30	full-splice_match	TNIK	ENST00000475336.5	3807	30	-368	-515	-23	-36	multi-exon	FALSE	canonical	1	20410	junction_16	33972.59352224707	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	369	4175	45.0	37	False	AATAAA	-29
PB.8517.15	chr3	-	4820	31	full-splice_match	TNIK	ENST00000470834.5	3972	31	-345	-503	0	-48	multi-exon	FALSE	canonical	1	88250	junction_28	26537.93342178115	NA	4	NA	TRUE	NA	NA	NA	C	coding	1323	3972	346	4317	35.0	-4	True	AATAAA	-17
PB.8517.16	chr3	-	4223	29	incomplete-splice_match	TNIK	ENST00000470834.5	3972	31	-386	2606	-41	0	3prime_fragment	FALSE	canonical	1	88250	junction_26	25108.743297979418	NA	0	NA	TRUE	NA	NA	NA	C	coding	1276	3831	387	4217	95.0	-5	True	AAGAAA	-25
PB.2537.13	chr12	+	4352	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	84	3	-3	0	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	3	1	TRUE	NA	NA	NA	C	coding	710	2133	81	2213	55.0	-36	True	AATAAA	-23
PB.7868.12	chr22	+	6139	7	novel_in_catalog	TRMU	novel	814	6	NA	NA	7	0	intron_retention	FALSE	canonical	1	66415	junction_3	96734.50241195687	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	5812	6123	20.0	-1	True	AATAAA	-16
PB.7868.13	chr22	+	6646	7	novel_in_catalog	TRMU	novel	814	6	NA	NA	8	0	intron_retention	FALSE	canonical	1	66415	junction_4	80632.17406153011	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	33	533	20.0	0	True	AATAAA	-16
PB.7868.10	chr22	+	3563	9	novel_in_catalog	TRMU	novel	814	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	66415	junction_4	74810.40054687834	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	43	543	20.0	-10	True	AATAAA	-16
PB.7868.11	chr22	+	1528	10	full-splice_match	TRMU	ENST00000381021.7	1830	10	302	0	2	0	multi-exon	FALSE	canonical	1	96181	junction_2	69047.69184813896	NA	6	NA	TRUE	NA	NA	NA	C	coding	306	921	277	1197	25.0	-6	True	AATAAA	-14
PB.4890.1	chr17	+	4758	14	novel_not_in_catalog	RAB11FIP4	novel	8628	15	NA	NA	-18	-2955	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	78484.27249851591	NA	4	1	TRUE	NA	NA	NA	C	coding	607	1824	46	1869	90.0	-165	False	NA	NA
PB.4890.2	chr17	+	3072	13	full-splice_match	RAB11FIP4	ENST00000394744.6	1968	13	103	-1207	-5	1204	multi-exon	FALSE	canonical	1	35073	junction_1	59184.530656714305	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	141	1748	5.0	-5	True	TATAAA	-22
PB.4890.3	chr17	+	4529	14	novel_not_in_catalog	RAB11FIP4	novel	8628	15	NA	NA	15	-2954	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	78484.27249851591	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	111	1718	90.0	-14	True	NA	NA
PB.8517.18	chr3	-	3364	24	incomplete-splice_match	TNIK	ENST00000470834.5	3972	31	-356	20324	-11	-17718	3prime_fragment	FALSE	canonical	1	88250	junction_21	25463.808954154643	NA	0	NA	TRUE	NA	NA	NA	C	coding	1002	3006	357	3362	60.0	-15	True	NA	NA
PB.8517.19	chr3	-	3548	22	incomplete-splice_match	TNIK	ENST00000470834.5	3972	31	-342	23030	0	-20424	3prime_fragment	FALSE	canonical	1	88250	junction_19	24491.95105713373	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	343	3144	70.0	-1	True	AGTAAA	-26
PB.1069.2	chr1	-	1765	1	incomplete-splice_match	SLC41A1	ENST00000367137.3	4997	11	22316	3	5756	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	354	False	AATAAA	-15
PB.7418.3	chr20	-	4291	10	novel_not_in_catalog	GMEB2	novel	4011	8	NA	NA	-1377	-4	any annotated donor/acceptor	FALSE	canonical	1	941	junction_9	59473.7484524698	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	216	1808	15.0	7039	False	AATAAA	-13
PB.8632.3	chr3	-	2717	13	novel_not_in_catalog	MELTF	novel	806	2	NA	NA	-31	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45071.98797687428	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1737	146	1882	20.0	-62	True	AATAAA	-42
PB.7994.16	chr3	+	2860	8	incomplete-splice_match	STT3B	ENST00000295770.3	4248	16	86885	8	-6386	-8	5prime_fragment	FALSE	canonical	1	882340	junction_1	327822.68507788394	NA	4	NA	TRUE	NA	NA	NA	C	coding	370	1113	198	1310	10.0	1207	False	AATAAA	-15
PB.7418.2	chr20	-	4389	10	novel_not_in_catalog	GMEB2	novel	4011	8	NA	NA	-40	-1	any annotated donor/acceptor	FALSE	canonical	1	3571	junction_2	66193.75082865023	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	184	1281	15.0	-7	True	AATAAA	-16
PB.11942.1	chrX	-	2667	5	novel_not_in_catalog	SLC25A6	novel	2062	4	NA	NA	-10	3521	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	14677.611156111201	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	105	1001	15.0	-1	True	AATAAA	-21
PB.11942.3	chrY	-	1351	4	full-splice_match	SLC25A6	ENST00000381401.10_PAR_Y	2062	4	611	100	-10	-100	multi-exon	FALSE	canonical	1	986	junction_1	1734.6189463074847	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	105	1001	15.0	-2	True	TTTAAA	-27
PB.11942.2	chrX	-	1464	4	full-splice_match	SLC25A6	ENST00000381401.10	2062	4	611	-13	-10	13	multi-exon	FALSE	canonical	1	15609	junction_1	9244.511921495188	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	105	1001	20.0	-1	True	AATAAA	-31
PB.8900.4	chr4	-	3870	13	full-splice_match	PPP3CA	ENST00000394853.8	3604	13	-265	-1	-32	1	multi-exon	FALSE	canonical	1	441508	junction_12	113426.6841204289	NA	2	NA	TRUE	NA	NA	NA	C	coding	511	1536	797	2332	25.0	43	False	AATAAA	-17
PB.11843.1	chr9	+	1614	4	full-splice_match	NTMT1	ENST00000372483.8	1315	4	-9	-290	-9	89	multi-exon	TRUE	canonical	1	357706	junction_1	145219.34738257923	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	187	858	90.0	-19	True	NA	NA
PB.11843.2	chr9	+	2135	4	full-splice_match	NTMT1	ENST00000372483.8	1315	4	-6	-814	-6	613	multi-exon	FALSE	canonical	1	357706	junction_1	145219.34738257923	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	184	855	10.0	-16	True	NA	NA
PB.6063.4	chr19	-	2490	5	full-splice_match	ZNF180	ENST00000590088.5	3131	5	2	639	0	-634	multi-exon	FALSE	canonical	1	20554	junction_4	20416.31764667664	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	291	2366	25.0	-3	True	TATAAA	-32
PB.1202.1	chr1	+	6927	13	novel_in_catalog	TSNAX-DISC1	novel	2569	8	NA	NA	98148	221882	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_12	17922.624794399766	NA	1	NA	TRUE	NA	NA	NA	A	coding	854	2565	68	2632	20.0	0	True	AATAAA	-17
PB.11437.3	chr9	+	2203	9	full-splice_match	RCL1	ENST00000381750.8	2134	9	75	-144	-32	133	multi-exon	FALSE	canonical	1	206235	junction_1	39763.858693385126	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	149	1270	30.0	0	True	NA	NA
PB.2912.1	chr12	-	1465	10	full-splice_match	TMEM116	ENST00000550831.7	1446	10	-34	15	6	1	multi-exon	TRUE	canonical	1	32682	junction_8	30988.475064764098	NA	1	1	TRUE	NA	NA	NA	C	coding	245	738	404	1141	25.0	5	True	AATAAA	-19
PB.6063.1	chr19	-	4016	5	full-splice_match	ZNF180	ENST00000590088.5	3131	5	289	-1174	260	-37	multi-exon	FALSE	canonical	1	20554	junction_4	20416.31764667664	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	4	2079	80.0	304	False	NA	NA
PB.6063.2	chr19	-	2837	5	full-splice_match	ZNF180	ENST00000590088.5	3131	5	289	5	260	0	multi-exon	FALSE	canonical	1	20554	junction_4	20416.31764667664	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	4	2079	65.0	304	False	AGTAAA	-15
PB.2912.2	chr12	-	2762	1	full-splice_match	TMEM116	ENST00000437003.3	2761	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	105	318	2341	2658	15.0	2	True	NA	NA
PB.10516.4	chr7	-	2362	8	novel_not_in_catalog	AC017116.2	novel	2698	6	NA	NA	-1606	-17002	intron_retention	TRUE	canonical	1	375	junction_3	13770.272418866518	NA	2	NA	TRUE	NA	NA	NA	A	coding	243	732	276	1007	10.0	6061	False	AGTAAA	-19
PB.8459.5	chr3	+	3048	10	incomplete-splice_match	HPS3	ENST00000296051.6	4665	17	53	13797	-1	5800	3prime_fragment	FALSE	canonical	1	157291	junction_1	40549.691214059276	NA	2	NA	TRUE	NA	NA	NA	C	coding	640	1923	88	2010	15.0	-15	True	ATTAAA	-23
PB.10516.1	chr7	-	3424	9	incomplete-splice_match	RASA4CP	ENST00000424092.2	1398	11	1284	-2359	1284	-24	5prime_fragment	FALSE	canonical	1	1656	junction_8	12675.092748674464	NA	19	1	TRUE	NA	NA	NA	B	coding	324	975	91	1065	90.0	6037	False	NA	NA
PB.10516.3	chr7	-	1531	9	incomplete-splice_match	RASA4CP	ENST00000424092.2	1398	11	1269	-451	1269	344	5prime_fragment	FALSE	canonical	1	1656	junction_8	12675.092748674464	NA	0	NA	TRUE	NA	NA	NA	B	coding	324	975	106	1080	10.0	6022	False	AGTAAA	-20
PB.8582.11	chr3	-	4162	14	novel_not_in_catalog	ETV5	novel	4111	13	NA	NA	-10	-9	any annotated donor/acceptor	FALSE	canonical	1	743	junction_8	90598.76505088554	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	914	1840	15.0	-3	True	AATAAA	-24
PB.8900.5	chr4	-	3206	13	full-splice_match	PPP3CA	ENST00000394853.8	3604	13	-234	632	-1	358	multi-exon	FALSE	canonical	1	441508	junction_12	113426.6841204289	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	766	2301	70.0	18	True	GATAAA	-16
PB.8344.9	chr3	-	4076	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	7	1102	intron_retention	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	53	1669	25.0	15	True	ATTAAA	-13
PB.1234.28	chr1	-	2994	13	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-33	-313	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	114323.53028755596	NA	0	NA	TRUE	NA	NA	NA	B	coding	909	2727	267	2993	60.0	-11	True	NA	NA
PB.1234.29	chr1	-	2572	13	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-4	274	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	114323.53028755596	NA	0	NA	TRUE	NA	NA	NA	B	coding	748	2244	328	2571	60.0	7	True	NA	NA
PB.2578.1	chr12	-	4366	15	incomplete-splice_match	ADCY6	ENST00000307885.4	6464	21	7778	-131	133	0	5prime_fragment	FALSE	canonical	1	169664	junction_2	29352.018968645312	NA	0	NA	TRUE	NA	NA	NA	A	coding	604	1815	159	1973	25.0	NA	False	AATAAA	-15
PB.1234.27	chr1	-	3166	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-14	-308	intron_retention	FALSE	non_canonical	0	0	junction_8	118905.71901092114	NA	4	NA	TRUE	NA	NA	NA	B	coding	973	2919	248	3166	50.0	8	True	NA	NA
PB.8344.6	chr3	-	4340	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-15	2505	2	1226	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	193	1809	45.0	-7	True	AATAAA	-22
PB.8344.7	chr3	-	4200	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	3	1222	intron_retention	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	57	1673	30.0	11	True	AATAAA	-18
PB.574.2	chr1	+	2781	2	full-splice_match	S1PR1	ENST00000305352.6	2909	2	123	5	112	-5	multi-exon	FALSE	canonical	1	254741	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	253	1401	35.0	-8	True	AATAAA	-12
PB.8344.1	chr3	-	6837	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-11	4	-2	-4	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	189	1805	25.0	-3	True	NA	NA
PB.8344.2	chr3	-	6535	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	0	-186	intron_retention	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	69	1685	10.0	-1	True	ATTAAA	-16
PB.8344.3	chr3	-	5203	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-11	1638	-2	-1638	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	189	1805	15.0	-3	True	NA	NA
PB.8897.1	chr4	-	2601	3	full-splice_match	DDIT4L	ENST00000273990.6	2604	3	1	2	1	-2	multi-exon	FALSE	canonical	1	41992	junction_1	2349.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	193	582	215	796	10.0	0	True	AATAAA	-16
PB.1952.18	chr11	+	4932	17	full-splice_match	CTNND1	ENST00000532463.5	5749	17	84	733	63	505	multi-exon	FALSE	canonical	1	9485	junction_1	290225.32918643573	NA	2	1	TRUE	NA	NA	NA	C	coding	832	2499	297	2795	10.0	-1945	False	AATAAA	-15
PB.1952.16	chr11	+	3467	19	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49249	24984	no_combination_of_known_junctions	FALSE	canonical	1	61530	junction_18	353164.7714764314	NA	0	NA	TRUE	NA	NA	NA	B	coding	932	2799	407	3205	30.0	47	True	AAGAAA	-29
PB.1952.17	chr11	+	5281	18	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49251	26860	no_combination_of_known_junctions	FALSE	canonical	1	29297	junction_16	321575.11418422154	NA	0	NA	TRUE	NA	NA	NA	B	coding	912	2739	405	3143	10.0	49	True	AATAAA	-16
PB.1952.14	chr11	+	4956	17	full-splice_match	CTNND1	ENST00000529986.5	5727	17	39	732	18	506	multi-exon	FALSE	canonical	1	201053	junction_1	257562.85785294237	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	320	2818	10.0	29	True	AATAAA	-16
PB.1952.15	chr11	+	5241	18	full-splice_match	CTNND1	ENST00000428599.6	6016	18	42	733	21	505	multi-exon	FALSE	canonical	1	28130	junction_1	313040.40479088336	NA	2	NA	TRUE	NA	NA	NA	C	coding	933	2802	303	3104	10.0	32	True	AATAAA	-15
PB.1952.12	chr11	+	5344	19	full-splice_match	CTNND1	ENST00000358694.10	6135	19	58	733	37	505	multi-exon	FALSE	canonical	1	198383	junction_1	311352.4790914552	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	406	3207	10.0	48	True	AATAAA	-15
PB.1952.13	chr11	+	5263	19	novel_not_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49227	26860	any annotated donor/acceptor	FALSE	canonical	1	47	junction_1	356512.31389602367	NA	2	1	TRUE	NA	NA	NA	B	coding	879	2640	486	3125	10.0	25	True	AATAAA	-16
PB.1952.10	chr11	+	5020	17	full-splice_match	CTNND1	ENST00000426142.6	5800	17	48	732	27	506	multi-exon	FALSE	canonical	1	50623	junction_1	282888.535566545	NA	1	NA	TRUE	NA	NA	NA	C	coding	832	2499	384	2882	10.0	38	True	AATAAA	-16
PB.1952.11	chr11	+	6109	19	full-splice_match	CTNND1	ENST00000358694.10	6135	19	27	-1	6	1	multi-exon	FALSE	canonical	1	198383	junction_1	311352.4790914552	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	437	3238	10.0	17	True	ATTAAA	-19
PB.7965.4	chr3	-	2146	3	full-splice_match	DPH3	ENST00000488423.1	3131	3	9	976	6	956	multi-exon	FALSE	canonical	1	205167	junction_2	10595.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	82	249	88	336	70.0	-21	True	AAGAAA	-26
PB.7965.5	chr3	-	2025	2	full-splice_match	DPH3	ENST00000383775.4	3052	2	49	978	49	953	multi-exon	FALSE	canonical	1	202423	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-12	True	AAGAAA	-23
PB.10830.14	chr7	+	2320	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	52	-9	intron_retention	FALSE	canonical	0	0	junction_1	106009.44136225556	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	215	1759	40.0	-4135	False	AATGAA	-5
PB.7965.1	chr3	-	4044	3	full-splice_match	DPH3	ENST00000488423.1	3131	3	3	-916	0	916	multi-exon	FALSE	canonical	1	205167	junction_2	10595.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	82	249	94	342	10.0	23	False	NA	NA
PB.7965.2	chr3	-	3123	3	full-splice_match	DPH3	ENST00000488423.1	3131	3	7	1	4	0	multi-exon	FALSE	canonical	1	205167	junction_2	10595.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	82	249	90	338	15.0	-23	True	AATAAA	-40
PB.7965.3	chr3	-	3048	2	full-splice_match	DPH3	ENST00000383775.4	3052	2	4	0	4	0	multi-exon	FALSE	canonical	1	202423	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-23	True	AATAAA	-40
PB.675.1	chr1	-	1476	9	full-splice_match	RNF115	ENST00000582693.4	9117	9	90	7551	90	-30	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	304	915	115	1029	75.0	0	True	TATAAA	-24
PB.1166.24	chr1	-	3253	23	full-splice_match	PARP1	ENST00000366794.9	3958	23	99	606	8	-2	multi-exon	FALSE	canonical	1	256970	junction_13	508193.5105697195	NA	4	NA	TRUE	NA	NA	NA	C	coding	1014	3045	46	3090	10.0	115	False	NA	NA
PB.8257.42	chr3	+	2615	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	131	1126	35.0	0	True	AATAAA	-20
PB.10479.5	chr7	+	3444	21	full-splice_match	BBS9	ENST00000350941.7	3899	21	13	442	-4	0	multi-exon	FALSE	canonical	1	3233	junction_13	29917.046314935567	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	501	3044	40.0	-11	True	AATAAA	-14
PB.8257.40	chr3	+	1745	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	122	1117	25.0	-10	False	CATAAA	-45
PB.8257.41	chr3	+	2683	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	56773.51143702492	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	457	1194	35.0	2	True	AATAAA	-20
PB.8257.46	chr3	+	2553	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	0	-117	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	56773.51143702492	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	440	1177	65.0	0	True	AATAAA	-41
PB.8257.47	chr3	+	2483	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	0	-117	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	112	1107	65.0	0	True	AATAAA	-41
PB.8257.44	chr3	+	2591	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	8037	junction_1	51069.108883676825	NA	7	1	TRUE	NA	NA	NA	C	coding	354	1065	38	1102	35.0	-3	True	AATAAA	-20
PB.8695.6	chr4	+	4329	18	novel_not_in_catalog	SH3TC1	novel	543	4	NA	NA	99	0	any annotated donor/acceptor	FALSE	canonical	1	1408	junction_1	66970.43907973781	NA	0	NA	TRUE	NA	NA	NA	C	coding	1260	3783	411	4193	30.0	-3	True	AATAAA	-15
PB.8257.48	chr3	+	2390	6	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	0	-167	combination_of_known_junctions	FALSE	canonical	1	8035	junction_5	61237.81155332055	NA	7	NA	TRUE	NA	NA	NA	C	coding	141	426	35	460	15.0	0	True	AATACA	-13
PB.8257.49	chr3	+	2953	13	novel_not_in_catalog	ST3GAL6	novel	804	5	NA	NA	1	-4	any annotated donor/acceptor	FALSE	canonical	1	2966	junction_7	67246.63328416938	NA	7	NA	TRUE	NA	NA	NA	C	coding	187	564	901	1464	35.0	1	True	AATAAA	-20
PB.8695.5	chr4	+	4187	18	novel_in_catalog	SH3TC1	novel	543	4	NA	NA	14	5	combination_of_known_junctions	FALSE	canonical	1	7891	junction_9	64262.42466797851	NA	3	1	TRUE	NA	NA	NA	C	coding	1309	3930	117	4046	40.0	0	True	AATAAA	-20
PB.10068.13	chr6	+	1747	15	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-119	55574	4	-20780	3prime_fragment	FALSE	canonical	1	148676	junction_1	26366.916782829445	NA	0	NA	TRUE	NA	NA	NA	B	coding	496	1488	259	1746	40.0	1	True	NA	NA
PB.832.3	chr1	+	3248	7	novel_not_in_catalog	PRCC	novel	833	4	NA	NA	-18	2	intron_retention	FALSE	non_canonical	0	0	junction_3	359756.04697971686	NA	3	NA	TRUE	NA	NA	NA	C	coding	410	1233	238	1470	10.0	0	True	AATAAA	-17
PB.1586.1	chr10	-	2889	7	novel_not_in_catalog	HPSE2	novel	3681	9	NA	NA	79501	-576	any annotated donor/acceptor	FALSE	canonical	1	288	junction_6	6345.265411225041	NA	0	NA	TRUE	NA	NA	NA	A	coding	282	849	120	968	70.0	NA	False	AAGAAA	-24
PB.10479.6	chr7	+	3713	22	novel_not_in_catalog	BBS9	novel	613	4	NA	NA	2	151	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	29900.818473391075	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	495	2069	20.0	-5	True	AATAAA	-19
PB.3771.1	chr15	+	3488	3	novel_not_in_catalog	SRP14-AS1	novel	2317	3	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	1813	junction_2	39804.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	167	504	2078	2581	30.0	-28	True	TATAAA	-21
PB.5875.1	chr19	+	2341	4	full-splice_match	ZNF85	ENST00000328178.12	2296	4	-47	2	-12	-2	multi-exon	FALSE	canonical	1	28540	junction_3	10901.54817751436	NA	0	NA	TRUE	NA	NA	NA	A	coding	595	1788	161	1948	40.0	-42	False	AATAAA	-15
PB.3771.3	chr15	+	2229	2	novel_not_in_catalog	SRP14-AS1	novel	2317	3	NA	NA	-2566	219	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	127	384	384	767	35.0	NA	False	NA	NA
PB.3771.2	chr15	+	2813	4	novel_not_in_catalog	SRP14-AS1	novel	2317	3	NA	NA	-10	218	any annotated donor/acceptor	FALSE	canonical	1	8125	junction_2	30474.19787295475	NA	4	NA	TRUE	NA	NA	NA	B	coding	127	384	969	1352	35.0	19	True	NA	NA
PB.4767.1	chr17	-	2585	3	novel_not_in_catalog	KRBA2	novel	3038	6	NA	NA	14	2118	intron_retention	FALSE	non_canonical	0	0	junction_1	19179.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	409	1230	822	2051	10.0	6	True	ATTAAA	-36
PB.10479.1	chr7	+	3565	22	novel_not_in_catalog	BBS9	novel	613	4	NA	NA	-6	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	29900.818473391075	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	503	2077	35.0	-13	True	AATAAA	-15
PB.2111.1	chr11	-	4231	24	full-splice_match	PITPNM1	ENST00000356404.7	4225	24	7	-13	0	12	multi-exon	FALSE	canonical	1	52779	junction_23	80970.3146354426	NA	1	1	TRUE	NA	NA	NA	A	coding	1244	3735	220	3954	25.0	-3	True	AATAAA	-29
PB.6407.2	chr2	-	2745	8	full-splice_match	FAM98A	ENST00000238823.12	2816	8	66	5	-5	-1	multi-exon	FALSE	canonical	1	295690	junction_4	74178.77606492168	NA	118	4	TRUE	NA	NA	NA	C	coding	518	1557	76	1632	5.0	-6	True	AATAAA	-15
PB.12332.1	chrX	+	6147	36	full-splice_match	PLXNB3	ENST00000361971.9	6146	36	-7	6	-7	-5	multi-exon	TRUE	canonical	1	30366	junction_2	46454.86385430969	NA	6	1	TRUE	NA	NA	NA	A	coding	1909	5730	122	5851	25.0	0	True	AATAAA	-19
PB.8695.2	chr4	+	2004	2	full-splice_match	SH3TC1	ENST00000507123.1	554	2	15	-1465	9	954	multi-exon	FALSE	canonical	1	69490	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	122	460	100.0	-5	True	NA	NA
PB.10479.3	chr7	+	1855	10	novel_in_catalog	BBS9	novel	613	4	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	4859	junction_9	27933.981281267843	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	522	1589	20.0	-32	True	ATTAAA	-21
PB.11343.8	chr8	-	1922	14	novel_in_catalog	FAM49B	novel	3798	12	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	143995	junction_12	301411.08845469466	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	279	1253	15.0	-6	True	AATAAA	-19
PB.3669.12	chr14	+	4909	31	incomplete-splice_match	DYNC1H1	ENST00000360184.9	20003	78	63424	5652	-77	-1	5prime_fragment	FALSE	canonical	1	746681	junction_4	369772.5330506265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1534	4605	77	4681	5.0	NA	False	AATAAA	-13
PB.3743.4	chr15	-	3510	5	incomplete-splice_match	MTMR10	ENST00000565728.5	1623	13	-63	24377	-52	-10550	3prime_fragment	FALSE	canonical	1	141206	junction_3	88144.55230295006	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	154	678	35.0	-5	True	AATAAA	-23
PB.10479.2	chr7	+	3342	22	novel_not_in_catalog	BBS9	novel	613	4	NA	NA	41	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	34038.98367135371	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	280	1854	35.0	-279	False	AATAAA	-15
PB.3743.2	chr15	-	5418	17	full-splice_match	MTMR10	ENST00000567567.5	2833	17	-317	-2268	-288	0	multi-exon	FALSE	canonical	1	18397	junction_10	74497.35941366898	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	1396	2889	25.0	6	True	AATAAA	-18
PB.3743.3	chr15	-	4975	16	full-splice_match	MTMR10	ENST00000435680.5	4961	16	-14	0	-11	0	multi-exon	FALSE	canonical	1	92766	junction_10	56089.85263386675	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	113	2446	25.0	9	True	AATAAA	-18
PB.10282.3	chr6	+	2113	3	incomplete-splice_match	AKAP12	ENST00000253332.5	6597	4	36	6422	36	1165	3prime_fragment	FALSE	canonical	1	93955	junction_1	52100.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	154	2112	55.0	0	True	NA	NA
PB.10282.2	chr6	+	8320	4	full-splice_match	AKAP12	ENST00000253332.5	6597	4	36	-1759	36	-25	multi-exon	FALSE	canonical	1	93955	junction_1	301364.49157162197	NA	1	NA	TRUE	NA	NA	NA	C	coding	1782	5349	154	5502	25.0	0	True	AATAAA	-13
PB.7906.3	chr3	+	9648	59	full-splice_match	ITPR1	ENST00000357086.10	9767	59	8	111	3	0	multi-exon	FALSE	non_canonical	0	0	junction_26	70849.59993092534	NA	4	NA	TRUE	NA	NA	NA	C	coding	2710	8133	346	8478	75.0	5	True	NA	NA
PB.1127.4	chr1	+	3835	9	novel_not_in_catalog	LYPLAL1	novel	1898	5	NA	NA	0	96905	any annotated donor/acceptor	FALSE	canonical	1	469	junction_8	208050.9666466594	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	2656	3150	20.0	-9	True	NA	NA
PB.8511.18	chr3	+	2245	7	novel_in_catalog	SEC62	novel	363	2	NA	NA	0	329	intron_retention	FALSE	canonical	1	3308	junction_5	531237.4314123425	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	606	1148	65.0	3	True	NA	NA
PB.8511.19	chr3	+	4455	6	incomplete-splice_match	SEC62	ENST00000337002.8	6568	8	10180	1911	1494	-1911	5prime_fragment	FALSE	canonical	1	1274590	junction_5	98343.09978153017	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	148	1056	35.0	-5856	False	NA	NA
PB.8511.16	chr3	+	1725	1	novel_in_catalog	SEC62	novel	6568	8	NA	NA	3	12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	AAGAAA	-14
PB.7846.1	chr22	+	861	4	full-splice_match	TSPO	ENST00000337554.7	881	4	19	1	-14	0	multi-exon	FALSE	canonical	1	1148563	junction_1	491754.56833284453	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	102	611	10.0	-26	True	AATAAA	-17
PB.7846.2	chr22	+	2472	3	incomplete-splice_match	TSPO	ENST00000337554.7	881	4	20	1	-13	0	intron_retention	FALSE	canonical	1	1148563	junction_1	560243.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	101	493	10.0	-25	True	AATAAA	-17
PB.8511.15	chr3	+	1973	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	44	4551	1	-9	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	15	1214	30.0	-2	True	AATAAA	-12
PB.10303.1	chr6	-	3949	17	full-splice_match	SERAC1	ENST00000647468.1	3958	17	0	9	0	-9	multi-exon	FALSE	canonical	1	34604	junction_15	14108.299693797266	NA	2	NA	TRUE	NA	NA	NA	C	coding	654	1965	143	2107	35.0	-19	True	AATAAA	-10
PB.8511.13	chr3	+	3672	8	full-splice_match	SEC62	ENST00000337002.8	6568	8	39	2857	3	1685	multi-exon	FALSE	canonical	1	1274590	junction_7	91133.96339724172	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	20	1219	25.0	-7	True	AATAAA	-24
PB.7994.17	chr3	+	4439	7	incomplete-splice_match	STT3B	ENST00000295770.3	4248	16	87578	2	-5693	-2	5prime_fragment	FALSE	canonical	1	1021804	junction_2	254854.95211813893	NA	4	NA	TRUE	NA	NA	NA	C	coding	370	1113	1771	2883	30.0	1900	False	AATAAA	-21
PB.10303.2	chr6	-	3760	17	full-splice_match	SERAC1	ENST00000367104.8	3940	17	1	179	1	-1	multi-exon	FALSE	canonical	1	34604	junction_15	14108.299693797266	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	124	2088	35.0	0	True	NA	NA
PB.2105.1	chr11	+	2103	8	novel_in_catalog	TBC1D10C	novel	1520	9	NA	NA	-5	0	intron_retention	FALSE	canonical	1	160606	junction_5	54144.128431739045	NA	1	1	TRUE	NA	NA	NA	C	coding	220	663	1106	1768	10.0	17	True	AATAAA	-16
PB.2105.3	chr11	+	2663	7	novel_not_in_catalog	TBC1D10C	novel	1520	9	NA	NA	11	0	intron_retention	FALSE	canonical	1	21328	junction_1	100904.56951069605	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	1667	2329	15.0	-4	True	AATAAA	-15
PB.2105.2	chr11	+	1941	9	novel_not_in_catalog	TBC1D10C	novel	1520	9	NA	NA	-5	0	intron_retention	FALSE	canonical	1	8684	junction_1	94516.66373573696	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	133	792	15.0	17	True	AATAAA	-15
PB.2105.5	chr11	+	1848	9	novel_not_in_catalog	TBC1D10C	novel	1520	9	NA	NA	16	0	intron_retention	FALSE	canonical	1	21328	junction_1	91013.67499370287	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	40	699	15.0	1	True	AATAAA	-15
PB.2105.4	chr11	+	1948	9	full-splice_match	TBC1D10C	ENST00000542590.1	1659	9	-259	-30	15	0	multi-exon	FALSE	canonical	1	117749	junction_6	66914.75872845616	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	274	1614	15.0	0	True	AATAAA	-15
PB.8263.10	chr3	+	3651	18	full-splice_match	TBC1D23	ENST00000344949.9	3656	18	2	3	2	-3	multi-exon	FALSE	canonical	1	120028	junction_14	52534.727986766986	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	17	2071	25.0	11	True	AATAAA	-29
PB.2105.6	chr11	+	1714	10	novel_not_in_catalog	TBC1D10C	novel	1520	9	NA	NA	16	0	intron_retention	FALSE	canonical	1	21328	junction_1	91783.29267006073	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	40	1380	15.0	1	True	AATAAA	-15
PB.2259.1	chr11	-	4075	12	full-splice_match	ALKBH8	ENST00000428149.6	4079	12	4	0	0	0	multi-exon	FALSE	canonical	1	44021	junction_6	11014.16416849588	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	149	2143	5.0	-8	True	NA	NA
PB.2259.3	chr11	-	2156	12	full-splice_match	ALKBH8	ENST00000417449.6	2114	12	2	-44	2	-16	multi-exon	FALSE	canonical	1	16003	junction_11	16821.035788313857	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	118	2112	80.0	-6	True	TATAAA	-17
PB.2259.2	chr11	-	2182	12	full-splice_match	ALKBH8	ENST00000428149.6	4079	12	9	1888	-2	-16	multi-exon	FALSE	canonical	1	44021	junction_6	11014.16416849588	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	144	2138	80.0	-3	True	TATAAA	-17
PB.4702.10	chr17	-	2037	4	novel_in_catalog	SCIMP	novel	2383	5	NA	NA	-7	-192	no_combination_of_known_junctions	FALSE	canonical	1	5485	junction_3	95114.5323117813	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	650	964	80.0	-13	True	NA	NA
PB.4702.11	chr17	-	4786	5	full-splice_match	SCIMP	ENST00000574297.1	569	5	30	-4247	-7	-259	multi-exon	FALSE	canonical	1	16995	junction_1	71831.32738010275	NA	8	NA	TRUE	NA	NA	NA	C	coding	130	393	76	468	15.0	-13	True	ATTAAA	-22
PB.4702.12	chr17	-	2341	5	full-splice_match	SCIMP	ENST00000571800.5	2155	5	-37	-149	0	149	multi-exon	FALSE	canonical	1	16995	junction_1	78346.43651755962	NA	4	NA	TRUE	NA	NA	NA	C	coding	123	372	106	477	20.0	-43	True	NA	NA
PB.4702.13	chr17	-	2348	5	full-splice_match	SCIMP	ENST00000574297.1	569	5	14	-1793	14	149	multi-exon	FALSE	canonical	1	16995	junction_1	71831.32738010275	NA	9	NA	TRUE	NA	NA	NA	C	coding	130	393	92	484	20.0	-29	True	NA	NA
PB.4702.14	chr17	-	2247	5	full-splice_match	SCIMP	ENST00000574297.1	569	5	-33	-1645	-33	1	multi-exon	FALSE	canonical	1	16995	junction_1	71831.32738010275	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	139	531	20.0	404	False	NA	NA
PB.4702.15	chr17	-	2165	5	full-splice_match	SCIMP	ENST00000571800.5	2155	5	-10	0	-10	0	multi-exon	FALSE	canonical	1	16995	junction_1	78346.43651755962	NA	2	NA	TRUE	NA	NA	NA	C	coding	123	372	79	450	25.0	-16	True	NA	NA
PB.4702.16	chr17	-	2065	4	novel_in_catalog	SCIMP	novel	2383	5	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	5485	junction_3	95179.02705019747	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	NA	NA
PB.4702.17	chr17	-	2062	5	full-splice_match	SCIMP	ENST00000574297.1	569	5	0	-1493	0	-151	multi-exon	FALSE	canonical	1	16995	junction_1	71831.32738010275	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	106	498	55.0	-43	True	NA	NA
PB.3638.1	chr14	+	2619	1	novel_in_catalog	IFI27L1	novel	680	5	NA	NA	5	-5375	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-4	True	NA	NA
PB.3638.3	chr14	+	5956	2	incomplete-splice_match	IFI27L1	ENST00000555523.5	680	5	35	5	6	0	intron_retention	FALSE	canonical	1	278134	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	102	309	3	311	5.0	-27	False	AATAAA	-17
PB.3638.2	chr14	+	2193	3	full-splice_match	IFI27L1	ENST00000557600.5	828	3	-1	-1364	-1	-2	multi-exon	FALSE	canonical	1	196140	junction_2	40997.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	58	177	192	368	5.0	0	True	AATAAA	-20
PB.374.1	chr1	-	3076	11	full-splice_match	TESK2	ENST00000372086.3	3074	11	-2	0	-2	0	multi-exon	TRUE	canonical	1	47427	junction_10	17850.42177764996	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	404	2119	10.0	-6	True	AATAAA	-17
PB.374.2	chr1	-	2913	10	novel_in_catalog	TESK2	novel	2600	9	NA	NA	4	-4	no_combination_of_known_junctions	FALSE	canonical	1	5389	junction_6	32245.548269642997	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	393	1961	10.0	5	True	AATAAA	-12
PB.8246.3	chr3	-	3159	13	novel_in_catalog	PROS1	novel	3583	15	NA	NA	5	-4	intron_retention	FALSE	canonical	1	1490	junction_12	60544.43953749777	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	180	2027	40.0	21	False	AATAAA	-16
PB.9156.1	chr5	-	1546	9	full-splice_match	RETREG1	ENST00000306320.9	3268	9	62	1660	42	517	multi-exon	FALSE	canonical	1	77387	junction_8	43185.27132816813	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	26	1519	70.0	0	True	NA	NA
PB.9156.2	chr5	-	3248	2	full-splice_match	RETREG1	ENST00000509048.1	807	2	-3	-2438	-3	2438	multi-exon	FALSE	canonical	1	6452	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	107	324	71	394	25.0	-7	True	AGTAAA	-16
PB.9156.3	chr5	-	3023	2	full-splice_match	RETREG1	ENST00000509048.1	807	2	-42	-2174	-22	2174	multi-exon	FALSE	canonical	1	6452	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	107	324	110	433	10.0	9862	False	ATTAAA	-23
PB.8246.7	chr3	-	2753	16	full-splice_match	PROS1	ENST00000650591.1	3432	16	38	641	2	-574	multi-exon	FALSE	canonical	1	12339	junction_15	72206.66975268513	NA	6	NA	TRUE	NA	NA	NA	C	coding	708	2127	147	2273	20.0	0	True	ATTAAA	-17
PB.8246.6	chr3	-	3306	15	full-splice_match	PROS1	ENST00000394236.8	3583	15	164	113	8	-10	multi-exon	FALSE	canonical	1	89731	junction_13	48419.75626392767	NA	1	NA	TRUE	NA	NA	NA	C	coding	676	2031	177	2207	45.0	24	False	AATAAA	-18
PB.8246.4	chr3	-	3309	17	novel_not_in_catalog	PROS1	novel	3583	15	NA	NA	-22	-4	intron_retention	FALSE	non_canonical	0	0	junction_16	80443.53657649316	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	540	2177	40.0	40	True	AATAAA	-16
PB.8246.8	chr3	-	2592	15	full-splice_match	PROS1	ENST00000394236.8	3583	15	183	808	-9	-650	multi-exon	FALSE	canonical	1	89731	junction_13	48419.75626392767	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	158	2188	10.0	-11	True	ATTAAA	-25
PB.5513.1	chr18	+	1649	8	full-splice_match	SERPINB10	ENST00000238508.7	2122	8	-38	511	-38	358	multi-exon	FALSE	canonical	1	21960	junction_1	4104.722392363136	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	98	1291	40.0	-5	True	ATTAAA	-18
PB.7951.3	chr3	-	3516	15	full-splice_match	XPC	ENST00000476581.6	2944	15	7	-579	7	-3	multi-exon	FALSE	canonical	1	3819	junction_12	92809.63408023513	NA	1	1	TRUE	NA	NA	NA	C	coding	747	2244	482	2725	30.0	6	True	AATAAA	-11
PB.5513.3	chr18	+	2135	8	full-splice_match	SERPINB10	ENST00000238508.7	2122	8	-8	-5	-8	5	multi-exon	FALSE	canonical	1	21960	junction_1	4104.722392363136	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	68	1261	30.0	10	True	NA	NA
PB.5513.2	chr18	+	2005	7	novel_in_catalog	SERPINB10	novel	840	8	NA	NA	-33	-7	no_combination_of_known_junctions	FALSE	canonical	1	471	junction_5	11535.509202265654	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	93	689	45.0	0	True	NA	NA
PB.8145.3	chr3	+	2359	1	full-splice_match	RBM15B	ENST00000563281.1	6641	1	4272	10	4272	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	1485	False	AATAAA	-13
PB.8145.2	chr3	+	5501	1	full-splice_match	RBM15B	ENST00000563281.1	6641	1	1131	9	1131	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	502	1509	166	1674	45.0	-1656	False	AATAAA	-14
PB.8145.1	chr3	+	2169	1	full-splice_match	RBM15B	ENST00000563281.1	6641	1	958	3514	958	-3514	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	563	1692	156	1847	25.0	-1829	False	AGTAAA	-24
PB.11098.26	chr8	+	2489	11	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-24	546	combination_of_known_junctions	FALSE	canonical	1	38424	junction_1	175993.6746498578	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	345	1445	50.0	2	True	ATTAAA	-21
PB.10073.2	chr6	-	4590	8	novel_in_catalog	LCA5	novel	4542	8	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	2044	junction_7	12935.988420223763	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	485	2578	30.0	-1	True	AATAAA	-13
PB.8058.1	chr3	+	2655	4	novel_in_catalog	ZNF35	novel	2661	4	NA	NA	-23	-6	combination_of_known_junctions	FALSE	canonical	1	2654	junction_1	14229.87957316107	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	236	1819	10.0	-38	False	AATAAA	-15
PB.8058.2	chr3	+	2518	3	full-splice_match	ZNF35	ENST00000296092.7	2503	3	-16	1	-1	1	multi-exon	FALSE	canonical	1	18641	junction_2	4941.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	572	1675	10.0	-16	True	AATAAA	-22
PB.9553.38	chr5	-	2095	3	novel_not_in_catalog	CSNK1A1	novel	6067	10	NA	NA	-76	1438	intron_retention	FALSE	canonical	0	0	junction_1	1005070.5	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	8	True	NA	NA
PB.8058.4	chr3	+	2647	4	full-splice_match	ZNF35	ENST00000396056.6	2661	4	15	-1	0	1	multi-exon	FALSE	canonical	1	28524	junction_1	2213.6308534973837	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	221	1804	10.0	0	True	AATAAA	-22
PB.8058.5	chr3	+	2376	4	novel_not_in_catalog	ZNF35	novel	2661	4	NA	NA	14	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	11826.425899465805	NA	1	1	TRUE	NA	NA	NA	C	coding	367	1104	435	1538	5.0	17	True	AATAAA	-17
PB.7951.4	chr3	-	3486	15	novel_in_catalog	XPC	novel	3832	16	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	4150	junction_6	92157.92038627755	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	34	2007	30.0	-1	True	AATAAA	-11
PB.8494.1	chr3	-	2991	5	novel_in_catalog	LXN	novel	749	4	NA	NA	45	-1	intron_retention	FALSE	canonical	1	350177	junction_4	34248.454749813165	NA	1	NA	TRUE	NA	NA	NA	A	coding	178	537	171	707	30.0	-1	True	AATAAA	-20
PB.7951.7	chr3	-	3100	16	novel_not_in_catalog	XPC	novel	3832	16	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	7238	junction_1	90486.24413894818	NA	2	NA	TRUE	NA	NA	NA	C	coding	911	2736	34	2769	30.0	-1	True	AATAAA	-10
PB.6654.1	chr2	-	4896	24	novel_in_catalog	REV1	novel	4686	23	NA	NA	11	-1	combination_of_known_junctions	TRUE	canonical	1	15798	junction_21	81364.47061364184	NA	0	NA	TRUE	NA	NA	NA	C	coding	1180	3543	589	4131	30.0	-25	True	AATAAA	-17
PB.4064.1	chr15	+	8459	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	272	4	0	-4	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	249	1526	5.0	-56	True	AATAAA	-15
PB.4064.3	chr15	+	3047	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	291	5397	11	1212	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	230	1507	35.0	-37	True	AGTAAA	-16
PB.4064.2	chr15	+	2729	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	272	5734	0	875	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	249	1526	25.0	-56	True	GATAAA	-31
PB.4064.5	chr15	+	1826	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	299	6610	19	-1	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	222	1499	30.0	-29	True	ATTAAA	-18
PB.4064.4	chr15	+	6728	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	310	1697	-22	-1697	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	211	1488	40.0	-18	True	ATTAAA	-32
PB.4064.7	chr15	+	4657	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	330	3748	-2	2861	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	191	1468	30.0	2	True	NA	NA
PB.4064.6	chr15	+	5363	11	full-splice_match	ABHD2	ENST00000352732.9	8735	11	327	3045	-5	-3045	multi-exon	FALSE	canonical	1	354914	junction_9	100463.27102299625	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	194	1471	30.0	-1	True	AGTAAA	-17
PB.9937.1	chr6	-	2107	5	full-splice_match	NUDT3	ENST00000607016.1	9905	5	279	7519	279	-7519	multi-exon	FALSE	canonical	1	610363	junction_4	112494.20059385283	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	34	552	25.0	-13	True	AATAAA	-15
PB.2314.6	chr11	-	4550	26	novel_in_catalog	HYOU1	novel	4529	26	NA	NA	-31	2	intron_retention	FALSE	canonical	1	22497	junction_25	339816.09562926827	NA	0	NA	TRUE	NA	NA	NA	C	coding	999	3000	145	3144	5.0	-1	True	AATAAA	-17
PB.11430.3	chr9	+	2561	2	novel_not_in_catalog	RFX3-AS1	novel	552	6	NA	NA	1953	-138915	any annotated donor/acceptor	FALSE	canonical	1	2982	junction_1	0.0	NA	19	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	5	True	AATAAA	-18
PB.6654.4	chr2	-	4475	24	novel_not_in_catalog	REV1	novel	4686	23	NA	NA	5	7	any annotated donor/acceptor	FALSE	canonical	1	23680	junction_15	75808.15281895679	NA	1	NA	TRUE	NA	NA	NA	C	coding	728	2187	1991	4177	20.0	-31	True	AATAAA	-20
PB.11430.1	chr9	+	5328	6	novel_not_in_catalog	RFX3-AS1	novel	552	6	NA	NA	1948	7625	any annotated donor/acceptor	FALSE	canonical	1	474	junction_4	6039.813175918606	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.6654.5	chr2	-	4104	22	novel_in_catalog	REV1	novel	4686	23	NA	NA	26	7	no_combination_of_known_junctions	FALSE	canonical	1	5914	junction_18	78613.06885146322	NA	0	NA	TRUE	NA	NA	NA	C	coding	1200	3603	204	3806	20.0	-10	True	AATAAA	-20
PB.6601.1	chr2	-	2525	8	full-splice_match	ST3GAL5	ENST00000638227.1	2489	8	15	-51	3	6	multi-exon	FALSE	canonical	1	7003	junction_7	72758.74899323947	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	352	1524	15.0	0	True	AATAAA	-20
PB.449.3	chr1	+	3968	14	novel_in_catalog	ALG6	novel	1841	15	NA	NA	8	4	intron_retention	FALSE	non_canonical	0	0	junction_7	52697.188343418995	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	261	1133	30.0	8	True	AATAAA	-22
PB.6654.6	chr2	-	4419	24	novel_in_catalog	REV1	novel	4686	23	NA	NA	19	5	combination_of_known_junctions	FALSE	canonical	1	15798	junction_21	81364.47061364184	NA	1	NA	TRUE	NA	NA	NA	C	coding	1180	3543	581	4123	10.0	-17	True	AATAAA	-18
PB.449.1	chr1	+	2833	15	full-splice_match	ALG6	ENST00000371108.8	3371	15	17	521	4	-521	multi-exon	FALSE	non_canonical	0	0	junction_7	50958.912151189536	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	289	1812	30.0	0	True	AATAAA	-25
PB.8223.1	chr3	-	5098	24	novel_in_catalog	FRMD4B	novel	5060	23	NA	NA	-56	-278	combination_of_known_junctions	FALSE	canonical	1	15271	junction_22	39734.5482566104	NA	1	NA	TRUE	NA	NA	NA	B	coding	980	2943	563	3505	25.0	76	False	AATAAA	-18
PB.6654.7	chr2	-	3586	21	novel_in_catalog	REV1	novel	4686	23	NA	NA	4	-13	combination_of_known_junctions	FALSE	canonical	1	15798	junction_18	80133.67844077795	NA	4	NA	TRUE	NA	NA	NA	C	coding	997	2991	596	3586	80.0	-32	True	NA	NA
PB.6601.7	chr2	-	2511	7	full-splice_match	ST3GAL5	ENST00000639608.1	2457	7	0	-54	0	-1	multi-exon	FALSE	canonical	1	6790	junction_4	71519.17104156215	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	647	1519	20.0	-5	True	AATAAA	-11
PB.1111.8	chr1	-	1723	7	novel_in_catalog	TMEM206	novel	2475	8	NA	NA	-3	-6	no_combination_of_known_junctions	FALSE	canonical	1	6099	junction_5	60531.623488379104	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	148	990	50.0	-19	True	AATAAA	-10
PB.6189.1	chr19	-	2556	3	full-splice_match	ZNF600	ENST00000338230.3	3829	3	-4	1277	-4	-922	multi-exon	FALSE	canonical	1	2749	junction_1	11391.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	276	2441	30.0	23	True	AATAAA	-43
PB.8270.4	chr3	+	1597	2	full-splice_match	TRMT10C	ENST00000309922.6	1819	2	20	202	20	-202	multi-exon	FALSE	canonical	1	321065	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	135	1346	45.0	14	True	AATAAA	-13
PB.10089.4	chr6	+	2191	1	novel_in_catalog	NT5E	novel	3918	8	NA	NA	-59	-19377	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	126	381	109	489	40.0	-99	False	AATAAA	-19
PB.6189.3	chr19	-	2829	5	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-4	-927	any annotated donor/acceptor	FALSE	canonical	1	395	junction_4	28656.971336613715	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	344	2719	35.0	15	True	AATAAA	-38
PB.8270.2	chr3	+	532	2	full-splice_match	TRMT10C	ENST00000309922.6	1819	2	5	1282	5	-553	multi-exon	FALSE	canonical	1	321065	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	381	150	530	75.0	-1	True	NA	NA
PB.10089.5	chr6	+	3436	8	full-splice_match	NT5E	ENST00000369651.7	3918	8	468	14	-39	-1	multi-exon	FALSE	canonical	1	44875	junction_6	182942.17504011525	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	260	1663	15.0	-31	True	AATAAA	-9
PB.3999.8	chr15	+	2484	8	novel_in_catalog	UBE2Q2	novel	3130	13	NA	NA	-53	-5	no_combination_of_known_junctions	FALSE	canonical	1	1374	junction_2	135117.8810351486	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	153	932	30.0	1	True	AATAAA	-10
PB.6189.2	chr19	-	3183	5	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-3	-924	any annotated donor/acceptor	FALSE	canonical	1	11035	junction_4	25509.78745868926	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	695	3070	25.0	-4	True	AATAAA	-41
PB.455.8	chr1	+	3490	5	full-splice_match	AK4	ENST00000327299.7	6836	5	-74	3420	-74	1825	multi-exon	FALSE	canonical	1	102	junction_4	14889.015279728877	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	280	951	5.0	-917	False	ATTAAA	-17
PB.455.9	chr1	+	1728	5	full-splice_match	AK4	ENST00000327299.7	6836	5	-45	5153	-45	92	multi-exon	FALSE	canonical	1	102	junction_4	14889.015279728877	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	251	922	20.0	-888	False	ATTAAA	-17
PB.3999.1	chr15	+	2790	12	full-splice_match	UBE2Q2	ENST00000569423.5	2969	12	181	-2	-80	2	multi-exon	FALSE	canonical	1	89438	junction_2	98805.85431504359	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	180	1202	10.0	-26	True	AATAAA	-17
PB.3426.11	chr14	-	2531	29	novel_in_catalog	MAP4K5	novel	4812	18	NA	NA	-8	6231	no_combination_of_known_junctions	FALSE	canonical	1	34329	junction_6	89413.01214009227	NA	2	1	TRUE	NA	NA	NA	B	coding	750	2250	280	2529	65.0	-17	True	NA	NA
PB.3999.3	chr15	+	2665	9	novel_in_catalog	UBE2Q2	novel	3130	13	NA	NA	62	-5	combination_of_known_junctions	FALSE	canonical	1	13541	junction_4	141734.3771564877	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	299	1084	30.0	-145	False	AATAAA	-10
PB.3999.2	chr15	+	2828	10	novel_in_catalog	UBE2Q2	novel	3130	13	NA	NA	38	4	combination_of_known_junctions	TRUE	canonical	1	20314	junction_9	121826.20204553497	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	323	1267	20.0	-169	False	AATAAA	-19
PB.3999.5	chr15	+	2748	11	novel_in_catalog	UBE2Q2	novel	3130	13	NA	NA	-122	3	no_combination_of_known_junctions	FALSE	canonical	1	8256	junction_4	132369.08706174567	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	222	728	15.0	-1	True	AATAAA	-18
PB.3999.4	chr15	+	2840	13	full-splice_match	UBE2Q2	ENST00000267938.8	3130	13	258	32	-25	2	multi-exon	FALSE	canonical	1	148186	junction_2	85403.8909679894	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	125	1252	10.0	29	False	AATAAA	-17
PB.3999.7	chr15	+	2749	11	novel_in_catalog	UBE2Q2	novel	3130	13	NA	NA	-85	-4	combination_of_known_junctions	FALSE	canonical	1	5864	junction_9	121502.35839176127	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	185	1084	25.0	-31	True	AATAAA	-11
PB.3999.6	chr15	+	2687	10	novel_in_catalog	UBE2Q2	novel	3130	13	NA	NA	-121	-5	no_combination_of_known_junctions	FALSE	canonical	1	6333	junction_8	147747.8380583404	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	221	814	30.0	0	True	AATAAA	-10
PB.11161.1	chr8	+	1934	8	full-splice_match	MTFR1	ENST00000262146.8	2640	8	-29	735	-24	-735	multi-exon	FALSE	canonical	1	186983	junction_5	43513.04041272206	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	213	1157	15.0	-24	True	ATTAAA	-32
PB.3759.5	chr15	-	4710	35	full-splice_match	AQR	ENST00000156471.9	9694	35	259	4725	153	-7	multi-exon	FALSE	canonical	1	149345	junction_31	64414.170692379674	NA	0	NA	TRUE	NA	NA	NA	C	coding	1421	4266	160	4425	40.0	228	False	ATTAAA	-18
PB.6601.9	chr2	-	2429	8	full-splice_match	ST3GAL5	ENST00000638227.1	2489	8	10	50	0	19	multi-exon	FALSE	canonical	1	7003	junction_7	72758.74899323947	NA	1	1	TRUE	NA	NA	NA	C	coding	390	1173	357	1529	55.0	-5	True	TATAAA	-11
PB.3759.3	chr15	-	5094	35	full-splice_match	AQR	ENST00000156471.9	9694	35	30	4570	30	-1	multi-exon	FALSE	canonical	1	149345	junction_31	64414.170692379674	NA	2	NA	TRUE	NA	NA	NA	C	coding	1485	4458	197	4654	10.0	-1	True	NA	NA
PB.3759.2	chr15	-	5851	35	full-splice_match	AQR	ENST00000156471.9	9694	35	76	3767	-30	802	multi-exon	FALSE	canonical	1	149345	junction_31	64414.170692379674	NA	0	NA	TRUE	NA	NA	NA	C	coding	1485	4458	151	4608	90.0	45	False	NA	NA
PB.3759.1	chr15	-	7636	35	full-splice_match	AQR	ENST00000156471.9	9694	35	58	2000	-48	-2000	multi-exon	TRUE	canonical	1	149345	junction_31	64414.170692379674	NA	2	NA	TRUE	NA	NA	NA	C	coding	1485	4458	169	4626	20.0	-4	True	NA	NA
PB.6189.6	chr19	-	3272	7	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-4	-950	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	28708.288671953647	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	810	3185	40.0	15	True	AATAAA	-15
PB.9018.1	chr4	+	4374	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	12	-208	9	208	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	6	NA	TRUE	NA	NA	NA	C	coding	438	1317	563	1879	80.0	-2	True	NA	NA
PB.3759.9	chr15	-	4745	34	novel_not_in_catalog	AQR	novel	9694	35	NA	NA	-44	-123	any annotated donor/acceptor	FALSE	canonical	0	0	junction_25	78536.66895293065	NA	9	2	TRUE	NA	NA	NA	C	coding	1160	3483	1094	4576	35.0	0	True	AATATA	-19
PB.3759.8	chr15	-	4739	35	full-splice_match	AQR	ENST00000156471.9	9694	35	117	4838	11	-120	multi-exon	FALSE	canonical	1	149345	junction_31	64414.170692379674	NA	0	NA	TRUE	NA	NA	NA	C	coding	1485	4458	110	4567	30.0	-26	True	AATATA	-22
PB.4692.1	chr17	+	1831	10	novel_in_catalog	RNF167	novel	1728	11	NA	NA	-2	-1	intron_retention	TRUE	canonical	1	77195	junction_1	445051.0164055962	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	574	1626	35.0	-11	True	AATAAA	-20
PB.4692.2	chr17	+	1555	9	full-splice_match	RNF167	ENST00000575111.5	1757	9	230	-28	-47	-3	multi-exon	FALSE	canonical	1	928931	junction_2	265521.35603442404	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	300	1352	40.0	14	True	AATAAA	-18
PB.4692.3	chr17	+	1727	10	full-splice_match	RNF167	ENST00000262482.10	1915	10	187	1	16	-1	multi-exon	FALSE	canonical	1	298702	junction_1	389468.0324267899	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	470	1522	35.0	4	True	AATAAA	-20
PB.4692.4	chr17	+	1636	11	novel_in_catalog	RNF167	novel	1728	11	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	1	80052	junction_2	487980.1684503685	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	381	1433	40.0	-9913	False	AATAAA	-18
PB.4692.5	chr17	+	1885	9	novel_in_catalog	RNF167	novel	1728	11	NA	NA	-33	-2	intron_retention	FALSE	canonical	1	298702	junction_1	409395.42475238716	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	992	1681	40.0	-2	True	AATAAA	-19
PB.4692.6	chr17	+	1513	11	novel_in_catalog	RNF167	novel	1728	11	NA	NA	32	-3	combination_of_known_junctions	FALSE	canonical	1	39754	junction_2	495961.7209537547	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	363	1310	40.0	20	True	AATAAA	-18
PB.6189.8	chr19	-	2952	6	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-24	-950	any annotated donor/acceptor	FALSE	canonical	1	147	junction_3	28198.30016437161	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	490	2865	40.0	-1	True	AATAAA	-15
PB.1889.1	chr11	+	2776	12	novel_in_catalog	CAT	novel	2302	13	NA	NA	-21	-5	intron_retention	FALSE	canonical	1	875865	junction_1	279447.07011309563	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	111	1025	40.0	-30	True	AATAAA	-13
PB.9927.5	chr6	+	2456	12	novel_not_in_catalog	KIFC1	novel	2706	11	NA	NA	-24	-13	any annotated donor/acceptor	FALSE	canonical	1	21532	junction_10	229153.89742299553	NA	2	NA	TRUE	NA	NA	NA	C	coding	666	2001	150	2150	35.0	-22	True	AATAAA	-38
PB.1889.3	chr11	+	2148	12	novel_in_catalog	CAT	novel	2302	13	NA	NA	-3	-5	no_combination_of_known_junctions	FALSE	canonical	1	4298	junction_8	482466.4560697587	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	84	1289	40.0	-3	True	AATAAA	-13
PB.1889.2	chr11	+	1896	13	full-splice_match	CAT	ENST00000241052.4	2302	13	-18	424	-18	91	multi-exon	FALSE	canonical	1	875865	junction_1	268092.81551881536	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	108	1691	55.0	-27	True	AATGAA	-23
PB.1889.5	chr11	+	2336	14	novel_in_catalog	CAT	novel	2302	13	NA	NA	20	-5	combination_of_known_junctions	FALSE	canonical	1	9897	junction_9	561205.9840758932	NA	8	NA	TRUE	NA	NA	NA	C	coding	364	1095	61	1155	40.0	20	True	AATAAA	-13
PB.1889.4	chr11	+	2036	13	full-splice_match	CAT	ENST00000648322.1	2289	13	-1	254	-1	-254	multi-exon	FALSE	canonical	1	875865	junction_1	268092.81551881536	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	82	1665	70.0	-1	True	ATTAAA	-20
PB.9927.2	chr6	+	3606	10	incomplete-splice_match	KIFC1	ENST00000428849.6	2706	11	277	1593	-48	1241	3prime_fragment	FALSE	canonical	1	331079	junction_1	117065.95160321139	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	174	2198	0.0	-46	True	NA	NA
PB.1889.6	chr11	+	2255	13	full-splice_match	CAT	ENST00000648322.1	2289	13	30	4	30	-4	multi-exon	FALSE	canonical	1	875865	junction_1	268092.81551881536	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	51	1634	35.0	30	True	AATAAA	-14
PB.1908.8	chr11	+	3445	14	full-splice_match	EXT2	ENST00000395673.7	3454	14	1	8	1	-4	multi-exon	FALSE	canonical	1	14215	junction_1	146676.96214607926	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	56	2311	35.0	0	True	ATTAAA	-15
PB.3251.1	chr13	-	3921	2	novel_in_catalog	LIG4	novel	3982	3	NA	NA	-17	1	no_combination_of_known_junctions	FALSE	canonical	1	2879	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	911	2736	98	2833	35.0	-17	True	AATAAA	-19
PB.9018.5	chr4	+	4717	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	0	-539	0	539	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	575	1891	75.0	-14	True	NA	NA
PB.1908.1	chr11	+	2817	5	novel_in_catalog	EXT2	novel	3136	14	NA	NA	-18	907	combination_of_known_junctions	FALSE	canonical	1	2421	junction_4	226557.98657849163	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	229	1137	10.0	-543	False	NA	NA
PB.1908.3	chr11	+	3050	15	novel_in_catalog	EXT2	novel	3136	14	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	4321	junction_1	184833.68358670338	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	209	2404	35.0	-3	True	ATTAAA	-22
PB.1908.2	chr11	+	3517	14	full-splice_match	EXT2	ENST00000533608.5	3136	14	116	-497	-8	0	multi-exon	FALSE	canonical	1	303903	junction_1	86687.34834152678	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	219	2375	30.0	2	True	ATTAAA	-23
PB.1908.5	chr11	+	4924	12	novel_in_catalog	EXT2	novel	3136	14	NA	NA	1	1758	no_combination_of_known_junctions	FALSE	canonical	1	3750	junction_4	161515.80228029683	NA	6	NA	TRUE	NA	NA	NA	C	coding	606	1821	204	2024	30.0	2	True	ATTAAA	-13
PB.1908.4	chr11	+	5270	14	full-splice_match	EXT2	ENST00000533608.5	3136	14	127	-2261	-3	1764	multi-exon	FALSE	canonical	1	303903	junction_1	86687.34834152678	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	208	2364	20.0	-2	True	ATTAAA	-19
PB.1908.7	chr11	+	2985	14	full-splice_match	EXT2	ENST00000533608.5	3136	14	149	2	-19	-1	multi-exon	FALSE	canonical	1	303903	junction_1	86687.34834152678	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	186	2342	25.0	0	True	ATTAAA	-19
PB.1908.6	chr11	+	2861	13	novel_in_catalog	EXT2	novel	3136	14	NA	NA	1	-3	no_combination_of_known_junctions	FALSE	canonical	1	571	junction_5	158802.17065238662	NA	28	1	TRUE	NA	NA	NA	C	coding	331	996	1225	2220	20.0	2	True	ATTAAA	-17
PB.6186.1	chr19	+	3607	4	full-splice_match	ZNF701	ENST00000391785.7	2634	4	12	-985	12	985	multi-exon	FALSE	canonical	1	30627	junction_2	17799.161222434675	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	116	1513	75.0	0	True	NA	NA
PB.1127.3	chr1	+	1838	5	full-splice_match	LYPLAL1	ENST00000366927.3	1819	5	-24	5	7	-5	multi-exon	FALSE	canonical	1	75587	junction_2	178047.00073067084	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	41	706	25.0	1	True	NA	NA
PB.774.1	chr1	-	1158	8	full-splice_match	RAB13	ENST00000368575.3	1176	8	14	4	14	-1	multi-exon	FALSE	canonical	1	536	junction_7	197197.65167569355	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	103	714	15.0	0	True	ATTAAA	-15
PB.2070.1	chr11	-	1801	12	full-splice_match	EFEMP2	ENST00000531972.5	1813	12	11	1	11	0	multi-exon	FALSE	canonical	1	97891	junction_1	189663.3419190021	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	126	1457	15.0	-30	True	NA	NA
PB.2070.2	chr11	-	1919	11	full-splice_match	EFEMP2	ENST00000307998.10	2034	11	119	-4	-15	-1	multi-exon	FALSE	canonical	1	316318	junction_10	132320.69889189673	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	113	1444	15.0	-17	True	NA	NA
PB.774.2	chr1	-	897	8	full-splice_match	RAB13	ENST00000368575.3	1176	8	-25	304	-19	106	multi-exon	FALSE	canonical	1	536	junction_7	197197.65167569355	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	142	753	75.0	-1	True	AAAAAG	-11
PB.4113.6	chr15	-	3170	2	incomplete-splice_match	CHSY1	ENST00000543813.2	2173	3	47044	-1179	-78	-199	5prime_fragment	FALSE	canonical	1	27819	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	530	1593	112	1704	35.0	NA	False	AATAAA	-20
PB.9018.8	chr4	+	3432	10	full-splice_match	TMEM184C	ENST00000296582.7	4178	10	5	741	2	-741	multi-exon	FALSE	canonical	1	224615	junction_7	38112.19532277021	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	570	1886	70.0	-9	True	NA	NA
PB.9013.5	chr4	-	4579	15	novel_not_in_catalog	ZNF827	novel	7463	15	NA	NA	-187	-7	any annotated donor/acceptor	FALSE	canonical	1	1503	junction_2	38512.01217464229	NA	0	NA	TRUE	NA	NA	NA	C	coding	1077	3234	416	3649	90.0	0	True	NA	NA
PB.4113.4	chr15	-	3833	4	novel_not_in_catalog	CHSY1	novel	4550	3	NA	NA	-40	-16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	124208.90369141103	NA	5	1	TRUE	NA	NA	NA	B	coding	711	2136	49	2184	50.0	-1	True	AGTAAA	-3
PB.1465.1	chr10	+	2106	9	full-splice_match	NUDT13	ENST00000357321.8	2102	9	-4	0	-4	0	multi-exon	FALSE	canonical	1	9455	junction_7	7007.583909593948	NA	0	NA	TRUE	NA	NA	NA	A	coding	352	1059	123	1181	5.0	0	True	AATAAA	-19
PB.1179.1	chr1	+	844	7	full-splice_match	GUK1	ENST00000366728.6	842	7	-14	12	-3	-3	multi-exon	FALSE	canonical	1	258101	junction_6	1551213.5997914395	NA	1	1	TRUE	NA	NA	NA	C	coding	241	726	28	753	45.0	-3	True	AATAAA	-17
PB.11357.25	chr8	-	4063	30	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-10	-3	no_combination_of_known_junctions	FALSE	canonical	1	1961	junction_28	133156.84257095953	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	312	3005	30.0	-15	True	ATTAAA	-12
PB.1179.3	chr1	+	1705	7	novel_in_catalog	GUK1	novel	937	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	1403139	junction_1	964645.9869206625	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	931	1452	35.0	3	True	AATAAA	-24
PB.9013.7	chr4	-	4193	15	full-splice_match	ZNF827	ENST00000379448.8	4197	15	-3	7	-3	-7	multi-exon	FALSE	canonical	1	7839	junction_2	33690.4301900073	NA	1	NA	TRUE	NA	NA	NA	C	coding	1077	3234	68	3301	90.0	31	True	NA	NA
PB.11357.20	chr8	-	4159	29	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2279	junction_27	134840.3732725689	NA	5	1	TRUE	NA	NA	NA	C	coding	967	2904	195	3098	30.0	791	False	ATTAAA	-15
PB.1179.4	chr1	+	1629	9	novel_in_catalog	GUK1	novel	937	8	NA	NA	1	-3	intron_retention	FALSE	canonical	1	67713	junction_2	1564876.487527605	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	592	1383	45.0	4	True	AATAAA	-17
PB.793.2	chr1	+	1196	5	full-splice_match	SLC50A1	ENST00000368401.6	1218	5	16	6	0	0	multi-exon	FALSE	canonical	1	185664	junction_2	223020.69226461364	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	126	626	15.0	-24	True	AATAAA	-17
PB.11357.23	chr8	-	4374	31	novel_in_catalog	PTK2	novel	4955	32	NA	NA	-65	-1	combination_of_known_junctions	FALSE	canonical	1	5484	junction_30	117236.94656257282	NA	3	NA	TRUE	NA	NA	NA	C	coding	1052	3159	156	3314	30.0	1	True	ATTAAA	-14
PB.4113.2	chr15	-	3327	2	incomplete-splice_match	CHSY1	ENST00000543813.2	2173	3	46999	-1291	-123	-87	5prime_fragment	FALSE	canonical	1	27819	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	530	1593	157	1749	20.0	NA	False	AATAAA	-26
PB.9013.1	chr4	-	4529	15	novel_not_in_catalog	ZNF827	novel	7463	15	NA	NA	-152	-9	any annotated donor/acceptor	FALSE	canonical	1	14113	junction_2	36620.58615187833	NA	2	NA	TRUE	NA	NA	NA	C	coding	1084	3255	381	3635	85.0	35	True	NA	NA
PB.11343.1	chr8	-	3803	14	novel_in_catalog	FAM49B	novel	3798	12	NA	NA	-2	4	intron_retention	FALSE	canonical	1	143995	junction_12	301411.08845469466	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	276	1250	25.0	-3	True	NA	NA
PB.2544.1	chr12	-	2507	15	incomplete-splice_match	KIF21A	ENST00000544797.6	5040	34	-145	45776	-145	-7126	3prime_fragment	FALSE	canonical	1	98657	junction_14	48487.207058898006	NA	1	NA	TRUE	NA	NA	NA	B	coding	757	2271	235	2505	20.0	372	False	AAGAAA	-39
PB.2544.2	chr12	-	1935	12	incomplete-splice_match	KIF21A	ENST00000544797.6	5040	34	-137	47702	-137	-9052	3prime_fragment	FALSE	canonical	1	98657	junction_11	49204.189216094426	NA	1	NA	TRUE	NA	NA	NA	B	coding	569	1707	227	1933	65.0	380	False	AATACA	-12
PB.2544.3	chr12	-	1804	11	incomplete-splice_match	KIF21A	ENST00000544797.6	5040	34	-71	57419	-71	4794	3prime_fragment	FALSE	canonical	1	98657	junction_10	50976.10407720465	NA	0	NA	TRUE	NA	NA	NA	B	coding	548	1644	161	1804	75.0	-11	True	AAAAAG	-15
PB.1487.1	chr10	+	2773	2	incomplete-splice_match	LRMDA	ENST00000611255.4	1040	7	171	1116340	171	-595101	3prime_fragment	FALSE	canonical	1	47861	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	68	207	102	308	80.0	0	True	NA	NA
PB.8083.15	chr3	-	5096	20	novel_not_in_catalog	MAP4	novel	3724	10	NA	NA	-45	304	any annotated donor/acceptor	FALSE	canonical	1	25211	junction_17	433680.88799637475	NA	1	NA	TRUE	NA	NA	NA	C	coding	1164	3495	134	3628	40.0	-39	True	AATAAA	-9
PB.7753.2	chr22	-	1467	7	novel_not_in_catalog	RAC2	novel	1482	7	NA	NA	227	-10	any annotated donor/acceptor	FALSE	canonical	1	1550	junction_6	875337.4124392294	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	250	696	25.0	4345	False	NA	NA
PB.11132.6	chr8	-	2396	8	novel_in_catalog	LYPLA1	novel	2585	9	NA	NA	43	-2	combination_of_known_junctions	FALSE	canonical	1	25486	junction_4	79411.36221638076	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	213	701	30.0	-19	True	AATAAA	-21
PB.1506.3	chr10	+	2444	8	incomplete-splice_match	CCSER2	ENST00000372088.7	7659	10	34	48081	6	6466	3prime_fragment	FALSE	canonical	1	93039	junction_1	45692.949590562814	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2187	257	2443	75.0	3	True	AATAAA	-15
PB.1506.2	chr10	+	3945	10	full-splice_match	CCSER2	ENST00000372088.7	7659	10	32	3682	4	405	multi-exon	FALSE	canonical	1	93039	junction_1	48898.41070153305	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	259	3402	35.0	1	True	AATAAA	-21
PB.1506.1	chr10	+	3544	10	full-splice_match	CCSER2	ENST00000372088.7	7659	10	31	4084	3	3	multi-exon	FALSE	canonical	1	93039	junction_1	48898.41070153305	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	260	3403	10.0	0	True	ATTAAA	-17
PB.81.3	chr1	-	3639	9	novel_not_in_catalog	LZIC	novel	652	5	NA	NA	-33	2548	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	170521.8025904239	NA	3	NA	TRUE	NA	NA	NA	C	coding	190	573	282	854	35.0	-36	True	AATAAA	-19
PB.1506.5	chr10	+	4008	11	full-splice_match	CCSER2	ENST00000224756.12	7664	11	-56	3712	21	400	multi-exon	FALSE	canonical	1	66872	junction_9	65734.46678904454	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	242	2746	40.0	18	True	AATAAA	-16
PB.1506.4	chr10	+	2057	3	full-splice_match	CCSER2	ENST00000359979.8	2066	3	15	-6	15	6	multi-exon	FALSE	canonical	1	93039	junction_1	30564.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	248	1951	45.0	12	True	AATAAA	-28
PB.4487.1	chr16	+	4784	21	full-splice_match	PLEKHG4	ENST00000360461.9	6782	21	2017	-19	3	-1	multi-exon	FALSE	canonical	1	36065	junction_1	32250.851431047522	NA	0	NA	TRUE	NA	NA	NA	A	coding	1191	3576	519	4094	20.0	-28	True	AATAAA	-36
PB.11343.6	chr8	-	1981	13	full-splice_match	FAM49B	ENST00000519540.5	2021	13	71	-31	5	4	multi-exon	FALSE	canonical	1	101445	junction_12	286819.74018888734	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	331	1305	10.0	9	True	AATAAA	-26
PB.3208.41	chr13	-	1902	1	novel_in_catalog	EDNRB	novel	4471	8	NA	NA	2	-17425	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	166	501	256	756	70.0	1	True	NA	NA
PB.3208.40	chr13	-	2436	2	incomplete-splice_match	EDNRB	ENST00000643890.1	1689	7	-651	17425	-366	-17425	3prime_fragment	FALSE	canonical	1	36158	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	541	1290	70.0	-553	False	NA	NA
PB.1193.5	chr1	-	2931	23	full-splice_match	TTC13	ENST00000366661.8	3253	23	-12	334	9	-334	multi-exon	FALSE	canonical	1	59704	junction_15	44631.5789667598	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	21	2603	75.0	-4	True	AGTAAA	-41
PB.297.5	chr1	-	2431	17	novel_not_in_catalog	GNL2	novel	635	2	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	4734	junction_11	304548.7342454406	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	890	2398	30.0	-2	True	ATTAAA	-12
PB.2364.8	chr11	+	2069	12	novel_not_in_catalog	ST3GAL4	novel	545	5	NA	NA	50	-2	any annotated donor/acceptor	FALSE	canonical	1	854	junction_1	196178.32672868355	NA	1	1	TRUE	NA	NA	NA	C	coding	350	1053	428	1480	20.0	-1	True	ATTAAA	-19
PB.2364.9	chr11	+	1918	11	full-splice_match	ST3GAL4	ENST00000530591.5	1459	11	130	-589	50	-2	multi-exon	FALSE	canonical	1	31118	junction_1	169320.12357011792	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	340	1329	20.0	-1	True	ATTAAA	-19
PB.8248.7	chr3	+	3159	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	102	28	7	-28	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	4	NA	TRUE	NA	NA	NA	C	coding	340	1023	110	1132	30.0	-43	True	NA	NA
PB.8248.6	chr3	+	2726	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	77	486	3	-486	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	4	NA	TRUE	NA	NA	NA	C	coding	340	1023	135	1157	70.0	-68	True	NA	NA
PB.8248.1	chr3	+	2501	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	-19	807	-19	-807	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	231	1253	30.0	-1610	False	AATACA	-18
PB.3587.1	chr14	+	1910	1	antisense	novelGene_TMED8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.8248.3	chr3	+	3862	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	64	-637	0	637	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	148	1170	60.0	-81	True	NA	NA
PB.8248.2	chr3	+	2839	6	full-splice_match	NSUN3	ENST00000314622.8	3289	6	129	321	-16	-321	multi-exon	FALSE	canonical	1	80510	junction_1	21901.610693280072	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	83	1105	70.0	-16	True	NA	NA
PB.2364.1	chr11	+	1713	10	novel_in_catalog	ST3GAL4	novel	545	5	NA	NA	-6	-9	combination_of_known_junctions	FALSE	canonical	1	6856	junction_6	160324.9559574723	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	226	1131	40.0	-8	True	ATTAAA	-12
PB.2364.2	chr11	+	1797	11	full-splice_match	ST3GAL4	ENST00000227495.10	1790	11	21	-28	-3	-6	multi-exon	FALSE	canonical	1	52951	junction_3	148517.09362911733	NA	3	NA	TRUE	NA	NA	NA	C	coding	329	990	223	1212	25.0	-5	True	ATTAAA	-15
PB.2364.3	chr11	+	1845	12	novel_not_in_catalog	ST3GAL4	novel	545	5	NA	NA	37	-9	any annotated donor/acceptor	FALSE	canonical	1	3245	junction_1	175035.32503483284	NA	4	1	TRUE	NA	NA	NA	C	coding	333	1002	262	1263	40.0	35	True	ATTAAA	-12
PB.2364.4	chr11	+	3047	10	novel_in_catalog	ST3GAL4	novel	545	5	NA	NA	6	1916	intron_retention	FALSE	canonical	1	11343	junction_9	188341.88815188533	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	214	1425	95.0	4	True	NA	NA
PB.4642.2	chr17	-	2373	6	incomplete-splice_match	NXN	ENST00000575801.5	2681	8	40405	34	2295	-34	5prime_fragment	FALSE	canonical	1	281190	junction_5	37003.84079200428	NA	0	NA	TRUE	NA	NA	NA	A	coding	186	561	211	771	10.0	NA	False	AATAAA	-19
PB.2364.6	chr11	+	1780	11	full-splice_match	ST3GAL4	ENST00000534083.5	1919	11	193	-54	193	-9	multi-exon	FALSE	canonical	1	31118	junction_1	135859.9038611466	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	197	1198	40.0	142	False	ATTAAA	-12
PB.2364.7	chr11	+	2644	10	novel_in_catalog	ST3GAL4	novel	545	5	NA	NA	50	1375	intron_retention	FALSE	canonical	1	11343	junction_9	182184.72428795052	NA	1	1	TRUE	NA	NA	NA	C	coding	407	1224	340	1563	30.0	-1	True	ATTAAA	-22
PB.4532.11	chr16	+	4269	26	novel_not_in_catalog	SF3B3	novel	9720	26	NA	NA	4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	379025.8744722191	NA	5	NA	TRUE	NA	NA	NA	C	coding	1200	3603	183	3785	15.0	1	True	AATAGA	-19
PB.4532.10	chr16	+	3980	26	full-splice_match	SF3B3	ENST00000302516.9	9720	26	28	5712	3	-343	multi-exon	FALSE	canonical	1	528449	junction_3	315667.86521637323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	184	3837	20.0	0	True	NA	NA
PB.4532.13	chr16	+	4158	26	novel_not_in_catalog	SF3B3	novel	9720	26	NA	NA	4	-116	any annotated donor/acceptor	FALSE	canonical	1	6280	junction_11	375429.4414576459	NA	0	NA	TRUE	NA	NA	NA	C	coding	1201	3606	183	3788	25.0	1	True	AATACA	-16
PB.4532.12	chr16	+	4127	26	full-splice_match	SF3B3	ENST00000302516.9	9720	26	30	5563	5	-194	multi-exon	FALSE	canonical	1	528449	junction_3	315667.86521637323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	182	3835	10.0	2	True	NA	NA
PB.4532.15	chr16	+	2162	13	incomplete-splice_match	SF3B3	ENST00000302516.9	9720	26	30	22191	5	-729	3prime_fragment	FALSE	canonical	1	528449	junction_3	162500.389971562	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	182	1957	100.0	2	True	NA	NA
PB.4532.14	chr16	+	4130	25	novel_not_in_catalog	SF3B3	novel	9720	26	NA	NA	5	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	373816.5211242207	NA	1	NA	TRUE	NA	NA	NA	C	coding	1152	3459	191	3649	15.0	2	True	AATAGA	-16
PB.4532.16	chr16	+	4444	26	novel_in_catalog	SF3B3	novel	9720	26	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	1	1772	junction_1	368822.5529981679	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	307	3960	15.0	4	True	AATAGA	-19
PB.2225.1	chr11	+	2706	4	novel_in_catalog	PANX1	novel	2769	5	NA	NA	-85	-2	no_combination_of_known_junctions	FALSE	canonical	1	8788	junction_1	122071.27915643748	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	823	1611	45.0	-31	True	AATAAA	-19
PB.2225.2	chr11	+	6076	5	full-splice_match	PANX1	ENST00000227638.7	2769	5	312	-3619	311	3619	multi-exon	FALSE	canonical	1	179321	junction_1	47645.024139462876	NA	3	NA	TRUE	NA	NA	NA	C	coding	426	1281	74	1354	40.0	-1851	False	AATAAA	-16
PB.2225.3	chr11	+	5683	5	full-splice_match	PANX1	ENST00000227638.7	2769	5	-59	-2855	-59	2855	multi-exon	FALSE	canonical	1	179321	junction_1	47645.024139462876	NA	3	NA	TRUE	NA	NA	NA	C	coding	426	1281	445	1725	35.0	-5	True	AATAAA	-21
PB.2225.4	chr11	+	1831	5	full-splice_match	PANX1	ENST00000227638.7	2769	5	-54	992	-54	-986	multi-exon	FALSE	canonical	1	179321	junction_1	47645.024139462876	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	440	1720	30.0	0	True	AATAAA	-14
PB.2225.5	chr11	+	2465	5	full-splice_match	PANX1	ENST00000227638.7	2769	5	296	8	295	-2	multi-exon	FALSE	canonical	1	179321	junction_1	47645.024139462876	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	90	1370	45.0	-1867	False	AATAAA	-19
PB.2225.6	chr11	+	5777	4	novel_in_catalog	PANX1	novel	2769	5	NA	NA	470	3619	no_combination_of_known_junctions	FALSE	canonical	1	8788	junction_1	122071.27915643748	NA	6	NA	TRUE	NA	NA	NA	C	coding	284	855	201	1055	40.0	-1692	False	AATAAA	-16
PB.4497.2	chr16	+	2143	5	full-splice_match	NUTF2	ENST00000219169.8	2321	5	174	4	-17	-4	multi-exon	FALSE	canonical	1	458026	junction_2	282887.7399225707	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	110	493	15.0	-286	False	AATAAA	-11
PB.4497.1	chr16	+	914	5	full-splice_match	NUTF2	ENST00000219169.8	2321	5	152	1255	-39	-11	multi-exon	FALSE	canonical	1	458026	junction_2	282887.7399225707	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	132	515	40.0	2	True	AATAAA	-18
PB.11343.4	chr8	-	3706	13	full-splice_match	FAM49B	ENST00000517654.5	1817	13	0	-1889	0	-2	multi-exon	FALSE	canonical	1	206065	junction_11	281317.01317832945	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	185	1159	25.0	1	True	NA	NA
PB.12142.1	chrX	+	2432	6	full-splice_match	CHIC1	ENST00000373502.9	4158	6	-81	1807	-73	-611	multi-exon	FALSE	canonical	1	44567	junction_5	5877.728214199768	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	180	833	75.0	-382	False	NA	NA
PB.11349.7	chr8	-	1682	7	novel_not_in_catalog	ZFAT	novel	4273	14	NA	NA	3	1	any annotated donor/acceptor	FALSE	canonical	1	13102	junction_6	67094.26441809729	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	212	991	15.0	3	False	AATAAA	-15
PB.297.7	chr1	-	2551	17	novel_in_catalog	GNL2	novel	635	2	NA	NA	-10	-6	combination_of_known_junctions	FALSE	canonical	1	14934	junction_8	297105.212980387	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	124	2523	55.0	-11	True	ATTAAA	-7
PB.12122.1	chrX	+	3319	5	full-splice_match	EFNB1	ENST00000204961.4	3314	5	-32	27	-32	-27	multi-exon	FALSE	canonical	1	269994	junction_1	18417.116990723604	NA	2	NA	TRUE	NA	NA	NA	A	coding	346	1041	813	1853	75.0	-56	True	TATAAA	-34
PB.4716.20	chr17	+	2245	6	incomplete-splice_match	XAF1	ENST00000361842.7	3623	7	207	3299	1	420	3prime_fragment	FALSE	canonical	1	84748	junction_4	42211.63792605068	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	33	938	25.0	1	True	NA	NA
PB.4716.21	chr17	+	3556	7	novel_in_catalog	XAF1	novel	818	3	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	8253	junction_1	72579.22520636022	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	312	1082	25.0	3	True	AATAAA	-12
PB.12213.3	chrX	-	3833	1	novel_in_catalog	TSC22D3	novel	2027	3	NA	NA	0	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	41	126	252	377	40.0	-1	True	AATAAA	-18
PB.4716.23	chr17	+	1804	7	full-splice_match	XAF1	ENST00000361842.7	3623	7	209	1610	1	-71	multi-exon	FALSE	canonical	1	84748	junction_4	51900.45429366576	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	31	936	70.0	3	True	NA	NA
PB.4716.24	chr17	+	3108	8	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	2	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	82222.4059676074	NA	2	1	TRUE	NA	NA	NA	C	coding	157	474	23	496	25.0	11	True	AATAAA	-12
PB.4716.25	chr17	+	2742	6	full-splice_match	XAF1	ENST00000346752.8	1584	6	219	-1377	2	-607	multi-exon	FALSE	canonical	1	11133	junction_2	81090.09677636351	NA	1	1	TRUE	NA	NA	NA	C	coding	282	849	23	871	90.0	11	True	NA	NA
PB.4716.26	chr17	+	2992	7	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	65214.124010617685	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	22	927	20.0	12	True	AATAAA	-13
PB.12213.6	chrX	-	1945	3	full-splice_match	TSC22D3	ENST00000372397.6	2027	3	73	9	0	-6	multi-exon	FALSE	canonical	1	1621419	junction_2	153771.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	252	656	40.0	-1	True	AATAAA	-18
PB.4716.28	chr17	+	3695	8	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	7994	junction_5	81573.64419733039	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	294	653	20.0	21	True	AATAAA	-13
PB.12213.8	chrX	-	2113	4	full-splice_match	TSC22D3	ENST00000506081.5	956	4	-17	-1140	-6	-6	multi-exon	FALSE	canonical	1	1409	junction_3	879610.1730816138	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	222	824	40.0	-1128	False	AATAAA	-18
PB.3604.1	chr14	-	6286	19	novel_in_catalog	PTPN21	novel	6089	18	NA	NA	-23	-1	combination_of_known_junctions	TRUE	canonical	1	1064	junction_18	29577.558125488766	NA	1	NA	TRUE	NA	NA	NA	A	coding	1174	3525	404	3928	35.0	3473	False	AATAAA	-15
PB.1247.1	chr1	-	5142	4	full-splice_match	ZNF670	ENST00000366503.2	1994	4	-46	-3102	-46	3102	multi-exon	FALSE	canonical	1	43200	junction_3	5823.540980842803	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	206	1375	20.0	9	False	NA	NA
PB.8083.11	chr3	-	5091	19	full-splice_match	MAP4	ENST00000360240.10	5142	19	360	-309	-71	309	multi-exon	FALSE	canonical	1	635585	junction_18	261639.99975374347	NA	1	NA	TRUE	NA	NA	NA	C	coding	1152	3459	160	3618	25.0	359	False	AATAAA	-14
PB.10642.3	chr7	-	3463	20	novel_in_catalog	SEMA3A	novel	8225	17	NA	NA	32	592	combination_of_known_junctions	FALSE	canonical	1	1750	junction_19	39513.29159302266	NA	0	NA	TRUE	NA	NA	NA	B	coding	771	2316	486	2801	60.0	29	True	ATTAAA	-23
PB.1934.1	chr11	-	2474	4	full-splice_match	KBTBD4	ENST00000395288.6	2460	4	-14	0	-7	0	multi-exon	FALSE	canonical	1	15681	junction_3	92769.30547809921	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	186	1742	20.0	-15	True	AATAAA	-14
PB.1934.2	chr11	-	2431	4	novel_not_in_catalog	KBTBD4	novel	2444	4	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	1464	junction_3	99315.40277094765	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	68	1699	20.0	-16	True	AATAAA	-14
PB.1934.3	chr11	-	2361	4	full-splice_match	KBTBD4	ENST00000430070.6	2372	4	40	-29	1	0	multi-exon	FALSE	canonical	1	115360	junction_3	48094.223714149564	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	25	1629	20.0	-7	True	AATAAA	-14
PB.1116.16	chr1	+	3596	6	full-splice_match	VASH2	ENST00000366965.6	3572	6	-31	7	9	-7	multi-exon	FALSE	canonical	1	6162	junction_3	26143.24292508487	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	342	1277	80.0	10	True	NA	NA
PB.3384.4	chr14	+	2960	5	full-splice_match	FAM177A1	ENST00000280987.8	2927	5	-24	-9	1	9	multi-exon	FALSE	canonical	1	420746	junction_1	87400.28993802023	NA	2	NA	TRUE	NA	NA	NA	C	coding	236	711	86	796	20.0	-3	True	TATAAA	-31
PB.1518.2	chr10	+	1647	10	novel_not_in_catalog	PTEN	novel	9027	9	NA	NA	566	4217	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71236.02675214346	NA	0	NA	TRUE	NA	NA	NA	B	coding	520	1563	31	1593	25.0	-713	False	AATAAA	-14
PB.3384.3	chr14	+	1210	6	full-splice_match	FAM177A1	ENST00000382406.7	858	6	-10	-342	-10	342	multi-exon	FALSE	canonical	1	34488	junction_1	221880.56038454565	NA	1	1	TRUE	NA	NA	NA	C	coding	213	642	68	709	20.0	2	True	AATAAA	-20
PB.1518.1	chr10	+	1684	10	novel_not_in_catalog	PTEN	novel	9027	9	NA	NA	490	4217	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71236.02675214346	NA	1	NA	TRUE	NA	NA	NA	B	coding	507	1524	107	1630	25.0	-30	True	AATAAA	-14
PB.5384.3	chr18	+	2156	8	novel_in_catalog	AP005263.1	novel	914	9	NA	NA	34070	72757	no_combination_of_known_junctions	FALSE	canonical	1	114590	junction_1	86082.56281676354	NA	4	NA	TRUE	NA	NA	NA	B	coding	648	1944	212	2155	70.0	1	True	NA	NA
PB.5384.2	chr18	+	2417	8	novel_in_catalog	AP005263.1	novel	914	9	NA	NA	34048	72996	no_combination_of_known_junctions	FALSE	canonical	1	114590	junction_1	86082.56281676354	NA	0	NA	TRUE	NA	NA	NA	B	coding	728	2184	234	2417	60.0	-21	True	NA	NA
PB.5384.1	chr18	+	1530	8	novel_in_catalog	AP005263.1	novel	914	9	NA	NA	34281	72211	no_combination_of_known_junctions	FALSE	canonical	1	27459	junction_1	105987.74503378652	NA	0	NA	TRUE	NA	NA	NA	B	coding	466	1398	132	1529	70.0	-13	True	AATAAA	-26
PB.5384.7	chr18	+	2047	8	novel_in_catalog	AP005263.1	novel	914	9	NA	NA	34276	72723	no_combination_of_known_junctions	FALSE	canonical	1	27459	junction_1	105987.74503378652	NA	0	NA	TRUE	NA	NA	NA	B	coding	637	1911	137	2047	75.0	-18	True	NA	NA
PB.5384.6	chr18	+	1691	9	incomplete-splice_match	ANKRD12	ENST00000262126.8	11288	13	17	31250	-2	462	3prime_fragment	FALSE	canonical	1	114590	junction_1	88912.30425809677	NA	0	NA	TRUE	NA	NA	NA	B	coding	489	1467	224	1690	70.0	-11	True	AATAAA	-26
PB.5384.5	chr18	+	2203	9	incomplete-splice_match	ANKRD12	ENST00000262126.8	11288	13	18	30737	-1	-863	3prime_fragment	FALSE	canonical	1	114590	junction_1	88912.30425809677	NA	0	NA	TRUE	NA	NA	NA	B	coding	660	1980	223	2202	80.0	-10	True	NA	NA
PB.5384.4	chr18	+	1556	8	novel_in_catalog	AP005263.1	novel	914	9	NA	NA	34072	72159	no_combination_of_known_junctions	FALSE	canonical	1	114590	junction_1	86082.56281676354	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1347	210	1556	70.0	3	True	AAAAAG	-43
PB.12158.5	chrX	+	2224	9	novel_in_catalog	PGK1	novel	2405	11	NA	NA	30	5	intron_retention	FALSE	canonical	1	1623993	junction_7	1717756.075976806	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	779	1402	5.0	-1009	False	AATAAA	-20
PB.12158.4	chrX	+	2590	11	full-splice_match	PGK1	ENST00000373316.4	4887	11	-38	2335	-38	12	multi-exon	FALSE	canonical	1	1623993	junction_8	2022128.1005727109	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	206	1459	20.0	-1077	False	NA	NA
PB.12158.7	chrX	+	2342	11	full-splice_match	PGK1	ENST00000373316.4	4887	11	74	2471	74	-124	multi-exon	FALSE	canonical	1	1623993	junction_8	2022128.1005727109	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	94	1347	20.0	0	True	NA	NA
PB.12158.6	chrX	+	3744	1	novel_in_catalog	PGK1	novel	2405	11	NA	NA	45	-5882	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	399	710	90.0	0	True	NA	NA
PB.12158.1	chrX	+	1978	13	novel_not_in_catalog	PGK1	novel	2405	11	NA	NA	-25	4	any annotated donor/acceptor	FALSE	canonical	1	116	junction_2	2423864.544345483	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	341	1537	5.0	NA	False	AATAAA	-19
PB.7328.6	chr20	-	1972	9	novel_in_catalog	SLC35C2	novel	5740	10	NA	NA	-11	411	intron_retention	FALSE	canonical	1	13188	junction_5	260315.74202350882	NA	3	1	TRUE	NA	NA	NA	C	coding	213	642	881	1522	5.0	-18	True	AATAAA	-17
PB.7328.5	chr20	-	2365	10	novel_not_in_catalog	SLC35C2	novel	5740	10	NA	NA	4	-412	intron_retention	FALSE	canonical	1	2728	junction_9	210350.31324793925	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	816	1913	10.0	20	True	AATAAA	-19
PB.12158.2	chrX	+	1687	11	full-splice_match	PGK1	ENST00000373316.4	4887	11	176	3024	176	5	multi-exon	FALSE	canonical	1	1623993	junction_8	2022128.1005727109	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	52	1245	5.0	-863	False	AATAAA	-20
PB.3247.11	chr13	+	3671	12	novel_not_in_catalog	BIVM	novel	3859	11	NA	NA	-36	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70120.35822795352	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	495	2006	35.0	1160	False	AATAAA	-18
PB.3247.10	chr13	+	3756	11	novel_in_catalog	BIVM	novel	3859	11	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	1	17566	junction_1	57986.75521323813	NA	2	NA	TRUE	NA	NA	NA	C	coding	503	1512	578	2089	40.0	1160	False	AATAAA	-20
PB.12158.9	chrX	+	2741	9	novel_in_catalog	PGK1	novel	2405	11	NA	NA	72	-118	intron_retention	FALSE	canonical	1	1623993	junction_7	1717756.075976806	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	737	1360	25.0	-2	True	NA	NA
PB.12158.8	chrX	+	2088	12	novel_not_in_catalog	PGK1	novel	2405	11	NA	NA	45	3	any annotated donor/acceptor	FALSE	canonical	1	2330	junction_1	2379970.8078649873	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	479	1648	5.0	0	True	AATAAA	-18
PB.5534.10	chr18	-	2692	4	full-splice_match	MBP	ENST00000397860.7	4844	4	-17	2169	-17	1982	multi-exon	FALSE	canonical	1	139552	junction_3	61585.83981728267	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	233	826	75.0	-4	True	CATAAA	-16
PB.11274.15	chr8	-	2814	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1799488	junction_8	1653183.7676571065	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	1175	2614	85.0	-2	True	NA	NA
PB.11274.14	chr8	-	3553	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1799488	junction_7	1783819.1420690343	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	506	2416	85.0	-2	True	NA	NA
PB.11274.17	chr8	-	2502	16	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	32961	junction_15	1968939.3048452076	NA	1	1	TRUE	NA	NA	NA	C	coding	636	1911	392	2302	85.0	-2	True	NA	NA
PB.6791.7	chr2	-	1692	8	full-splice_match	CYTIP	ENST00000264192.7	2260	8	163	405	107	-405	multi-exon	FALSE	canonical	1	525444	junction_7	75255.35095897954	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	65	1039	40.0	4	True	AATAAA	-20
PB.1562.9	chr10	-	3472	15	incomplete-splice_match	BLNK	ENST00000371176.6	1715	16	-29	3087	18	-3082	3prime_fragment	FALSE	canonical	1	102871	junction_8	86153.86382528361	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	172	1386	100.0	-2	True	NA	NA
PB.1562.8	chr10	-	1635	17	full-splice_match	BLNK	ENST00000224337.9	1784	17	9	140	9	-135	multi-exon	FALSE	canonical	1	182679	junction_16	68639.01946025193	NA	2	1	TRUE	NA	NA	NA	C	coding	456	1371	134	1504	25.0	-14	True	AATAAA	-20
PB.10387.8	chr7	-	2653	14	full-splice_match	PMS2	ENST00000642292.1	2679	14	29	-3	7	-2	multi-exon	FALSE	canonical	1	1894	junction_1	64359.08390296122	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	315	2498	20.0	15	False	AATACA	-42
PB.1562.5	chr10	-	1701	17	full-splice_match	BLNK	ENST00000224337.9	1784	17	77	6	53	-1	multi-exon	FALSE	canonical	1	182679	junction_16	68639.01946025193	NA	5	1	TRUE	NA	NA	NA	C	coding	456	1371	66	1436	55.0	1352	False	AATAAA	-13
PB.1562.4	chr10	-	4243	16	novel_in_catalog	BLNK	novel	1784	17	NA	NA	-24	-1	intron_retention	FALSE	canonical	1	182679	junction_15	68648.42528439139	NA	10	NA	TRUE	NA	NA	NA	C	coding	280	843	214	1056	55.0	-5	True	AATAAA	-13
PB.1562.7	chr10	-	1598	16	full-splice_match	BLNK	ENST00000371176.6	1715	16	-23	140	-23	-135	multi-exon	FALSE	canonical	1	102871	junction_9	85024.15306446097	NA	1	1	TRUE	NA	NA	NA	C	coding	433	1302	166	1467	25.0	4	True	AATAAA	-20
PB.1562.6	chr10	-	1738	16	full-splice_match	BLNK	ENST00000371176.6	1715	16	-29	6	18	-1	multi-exon	FALSE	canonical	1	102871	junction_9	85024.15306446097	NA	1	1	TRUE	NA	NA	NA	C	coding	433	1302	172	1473	55.0	-2	True	AATAAA	-13
PB.1562.1	chr10	-	2708	17	full-splice_match	BLNK	ENST00000224337.9	1784	17	-104	-820	-57	820	multi-exon	TRUE	canonical	1	182679	junction_16	68639.01946025193	NA	3	1	TRUE	NA	NA	NA	C	coding	456	1371	247	1617	65.0	1171	False	ACTAAA	-24
PB.7500.9	chr21	-	3316	22	full-splice_match	GART	ENST00000381815.8	3341	22	22	3	-2	-1	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	0	NA	TRUE	NA	NA	NA	C	coding	1010	3033	94	3126	20.0	-5	True	AATAGA	-42
PB.1562.3	chr10	-	2198	16	full-splice_match	BLNK	ENST00000371176.6	1715	16	-36	-447	11	447	multi-exon	FALSE	canonical	1	102871	junction_9	85024.15306446097	NA	1	1	TRUE	NA	NA	NA	C	coding	433	1302	179	1480	95.0	-9	True	NA	NA
PB.1562.2	chr10	-	2159	17	full-splice_match	BLNK	ENST00000224337.9	1784	17	53	-428	29	428	multi-exon	FALSE	canonical	1	182679	junction_16	68639.01946025193	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	90	1460	35.0	1	True	NA	NA
PB.6867.8	chr2	-	2500	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	213	3262	213	-3262	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	665	1998	53	2050	25.0	-14	True	AATAAA	-23
PB.6497.16	chr2	+	4032	23	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	71	-3	intron_retention	FALSE	canonical	1	24780	junction_13	97206.0069990767	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2637	412	3048	25.0	48	False	AATAAA	-21
PB.612.11	chr1	-	2011	9	novel_in_catalog	AL390195.1	novel	415	2	NA	NA	-7876	-2314	intron_retention	FALSE	canonical	1	372963	junction_8	212002.72393028202	NA	1	NA	TRUE	NA	NA	NA	B	coding	290	873	72	944	25.0	15	True	AATAAA	-13
PB.612.10	chr1	-	1381	10	full-splice_match	WDR77	ENST00000235090.9	2576	10	131	1064	131	274	multi-exon	FALSE	canonical	1	372963	junction_9	205839.4075233301	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	77	1105	25.0	10	True	AATAAA	-13
PB.1109.8	chr1	+	2285	14	full-splice_match	DTL	ENST00000542077.5	4471	14	193	1993	-100	-1581	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	1	NA	TRUE	NA	NA	NA	C	coding	688	2067	146	2212	50.0	-47	True	ACTAAA	-34
PB.6497.11	chr2	+	4447	24	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	1	374	intron_retention	FALSE	canonical	1	6325	junction_1	93739.05280762294	NA	0	NA	TRUE	NA	NA	NA	C	coding	1196	3591	320	3910	15.0	-26	True	ATTAAA	-17
PB.6867.2	chr2	-	4920	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	226	829	226	-829	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	665	1998	40	2037	40.0	-1	True	AATAAA	-14
PB.8051.2	chr3	+	2410	7	full-splice_match	ABHD5	ENST00000644371.1	5366	7	37	2919	1	-20	multi-exon	FALSE	canonical	1	201999	junction_2	73171.42568140927	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	87	1136	15.0	1	True	AATAAA	-32
PB.6867.4	chr2	-	3988	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	223	1764	223	-1764	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	665	1998	43	2040	5.0	-4	True	AAGAAA	-23
PB.4095.7	chr15	+	4263	24	novel_in_catalog	MCTP2	novel	1422	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	9452	junction_1	41607.6945987889	NA	0	NA	TRUE	NA	NA	NA	B	coding	878	2637	258	2894	10.0	16	True	NA	NA
PB.6867.6	chr2	-	2938	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	213	2824	213	-2824	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	665	1998	53	2050	35.0	-14	True	AATAAA	-22
PB.6497.10	chr2	+	1549	9	incomplete-splice_match	EHBP1	ENST00000431489.5	5076	23	-29	181600	1	-17	3prime_fragment	FALSE	canonical	1	135139	junction_1	45740.52064362626	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	912	636	1547	75.0	-26	True	CATAAA	-22
PB.9463.1	chr5	+	2374	4	full-splice_match	PCBD2	ENST00000254908.10	1223	4	213	-1364	-1	1364	multi-exon	FALSE	canonical	1	105706	junction_3	24024.964779717506	NA	2	NA	TRUE	NA	NA	NA	C	coding	103	312	103	414	15.0	-12	True	ATTAAA	-14
PB.6141.1	chr19	-	2315	2	novel_in_catalog	NOSIP	novel	697	7	NA	NA	-4	-7	intron_retention	FALSE	canonical	1	785681	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-4	True	NA	NA
PB.11502.4	chr9	+	2228	7	novel_in_catalog	CHMP5	novel	1957	7	NA	NA	78	-33	intron_retention	FALSE	canonical	1	403878	junction_6	330399.41962187557	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	1075	1581	55.0	-29	True	AATAAA	-9
PB.7500.8	chr21	-	3562	22	full-splice_match	GART	ENST00000381815.8	3341	22	21	-242	-3	242	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	2	NA	TRUE	NA	NA	NA	C	coding	1010	3033	95	3127	40.0	-6	True	NA	NA
PB.9463.2	chr5	+	2210	5	novel_not_in_catalog	PCBD2	novel	1223	4	NA	NA	8	1367	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	57900.117907371314	NA	2	1	TRUE	NA	NA	NA	C	coding	103	312	94	405	15.0	-3	True	ATTAAA	-17
PB.11185.8	chr8	-	2621	13	novel_in_catalog	STAU2	novel	2646	12	NA	NA	1	530	combination_of_known_junctions	FALSE	canonical	1	57923	junction_2	81458.04985526123	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	222	1775	35.0	-3	True	AATAAA	-13
PB.8051.8	chr3	+	2115	6	full-splice_match	ABHD5	ENST00000458276.7	1241	6	93	-967	1	-62	multi-exon	FALSE	canonical	1	19535	junction_5	112226.96919011936	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	21	857	75.0	-2	True	NA	NA
PB.11440.14	chr9	+	3160	5	novel_in_catalog	CD274	novel	3343	6	NA	NA	19	-57	intron_retention	FALSE	canonical	1	490	junction_1	43959.30461802143	NA	4	1	TRUE	NA	NA	NA	C	coding	25	78	455	532	25.0	2	True	AATAAA	-27
PB.11502.7	chr9	+	1707	8	full-splice_match	CHMP5	ENST00000223500.8	1477	8	107	-337	107	-193	multi-exon	FALSE	canonical	1	403878	junction_7	315576.148312374	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	31	690	30.0	0	True	AATAAA	-28
PB.11185.9	chr8	-	2506	12	novel_in_catalog	STAU2	novel	2646	12	NA	NA	0	530	combination_of_known_junctions	FALSE	canonical	1	26951	junction_11	93144.38906130259	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	107	1660	35.0	-1	True	AATAAA	-13
PB.6628.9	chr2	-	1792	3	novel_in_catalog	DUSP2	novel	1688	4	NA	NA	0	-12	intron_retention	FALSE	canonical	1	398178	junction_2	122962.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	87	941	60.0	-1	True	AATAAA	-15
PB.6628.8	chr2	-	1546	4	full-splice_match	DUSP2	ENST00000288943.4	1688	4	129	13	129	-13	multi-exon	FALSE	canonical	1	398178	junction_3	127579.88550011409	NA	0	NA	TRUE	NA	NA	NA	C	coding	86	261	642	902	60.0	3310	False	AATAAA	-14
PB.11502.6	chr9	+	1880	7	novel_in_catalog	CHMP5	novel	1957	7	NA	NA	85	214	intron_retention	FALSE	canonical	1	403878	junction_6	330399.41962187557	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	1068	1574	45.0	-22	True	AATAAA	-20
PB.6337.1	chr2	+	1563	1	antisense	novelGene_PUM2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.6628.1	chr2	-	1530	5	novel_not_in_catalog	DUSP2	novel	1688	4	NA	NA	0	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	273110.2039300024	NA	2	1	TRUE	NA	NA	NA	C	coding	314	945	87	1031	60.0	-1	True	AATAAA	-15
PB.6628.3	chr2	-	2263	1	novel_in_catalog	DUSP2	novel	1688	4	NA	NA	0	-12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	218	657	87	743	60.0	-1	True	AATAAA	-15
PB.6628.2	chr2	-	1470	5	novel_not_in_catalog	DUSP2	novel	1688	4	NA	NA	0	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	273110.2039300024	NA	0	NA	TRUE	NA	NA	NA	C	coding	86	261	565	825	60.0	-1	True	AATAAA	-15
PB.1676.1	chr10	-	1568	7	full-splice_match	PRDX3	ENST00000298510.3	1591	7	8	15	8	-15	multi-exon	FALSE	canonical	1	684831	junction_4	466904.95080143336	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	36	806	30.0	-14	True	AATAAA	-17
PB.6628.4	chr2	-	2179	2	novel_in_catalog	DUSP2	novel	1688	4	NA	NA	0	-12	intron_retention	FALSE	canonical	1	398178	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	87	659	60.0	-1	True	AATAAA	-15
PB.1676.3	chr10	-	2385	7	novel_not_in_catalog	PRDX3	novel	1591	7	NA	NA	6	-23	any annotated donor/acceptor	FALSE	canonical	1	8325	junction_2	754726.5318133449	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	38	610	40.0	-16	True	AATAAA	-9
PB.1676.2	chr10	-	1381	6	novel_in_catalog	PRDX3	novel	1591	7	NA	NA	21	-23	no_combination_of_known_junctions	FALSE	canonical	1	23542	junction_1	763890.2809316008	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	23	619	40.0	-1	True	AATAAA	-9
PB.8601.23	chr3	+	3533	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	203	2757	55	-354	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	32	3079	25.0	25	False	TATAAA	-17
PB.8601.22	chr3	+	4165	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-72	-6	-8	6	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	171	3107	50.0	0	True	AATAAA	-22
PB.8601.21	chr3	+	4287	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	60	2146	-12	13	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	175	3222	35.0	-4	True	AATAAA	-29
PB.8601.20	chr3	+	3506	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-63	644	0	-400	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	162	3098	40.0	9	True	AATAAA	-12
PB.8601.27	chr3	+	5245	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	64	1184	-8	5	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	171	3218	15.0	0	True	AATAAA	-17
PB.8601.26	chr3	+	5825	30	novel_in_catalog	OPA1	novel	6384	30	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	9774	junction_1	178545.20176514273	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	224	2899	35.0	0	True	ATTAAA	-16
PB.8601.25	chr3	+	3483	5	incomplete-splice_match	OPA1	ENST00000392436.7	3579	28	-12	47292	-8	2688	3prime_fragment	FALSE	canonical	1	217850	junction_1	121107.83975965387	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	171	827	70.0	0	True	NA	NA
PB.1605.2	chr10	-	998	3	full-splice_match	MRPL43	ENST00000318364.12	1010	3	18	-6	0	4	multi-exon	FALSE	canonical	1	679508	junction_2	325818.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	55	534	25.0	-1	True	AATAAA	-21
PB.3146.1	chr13	+	4147	23	full-splice_match	COG3	ENST00000349995.9	4498	23	-40	391	-13	-391	multi-exon	FALSE	canonical	1	101854	junction_22	39528.87967639703	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	153	2639	25.0	0	True	AATAAA	-14
PB.6708.14	chr2	+	2754	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	57	985	57	-976	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	72	2084	20.0	-5	True	AATAAA	-17
PB.3146.3	chr13	+	4289	21	novel_in_catalog	COG3	novel	531	2	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	7878	junction_17	43523.04671849157	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	128	2146	15.0	-58	True	AATAAA	-42
PB.3146.2	chr13	+	4350	22	novel_in_catalog	COG3	novel	531	2	NA	NA	12	-2	no_combination_of_known_junctions	FALSE	canonical	1	7411	junction_12	52285.4451151021	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	128	1480	15.0	-58	True	AATAAA	-40
PB.3146.5	chr13	+	4362	23	novel_not_in_catalog	COG3	novel	531	2	NA	NA	9	-6	any annotated donor/acceptor	FALSE	canonical	1	7735	junction_3	50542.26337925453	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	655	2469	10.0	-34	True	AATAAA	-36
PB.3146.4	chr13	+	4252	23	full-splice_match	COG3	ENST00000349995.9	4498	23	-5	251	-5	-251	multi-exon	FALSE	canonical	1	101854	junction_22	39528.87967639703	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	118	2604	5.0	-48	True	TATAAA	-15
PB.3146.7	chr13	+	4300	23	full-splice_match	COG3	ENST00000349995.9	4498	23	192	6	53	-6	multi-exon	FALSE	canonical	1	101854	junction_22	39528.87967639703	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	209	2407	10.0	116	False	AATAAA	-36
PB.3146.6	chr13	+	4455	23	novel_not_in_catalog	COG3	novel	531	2	NA	NA	16	4	any annotated donor/acceptor	FALSE	canonical	1	9215	junction_3	50337.52969467609	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	738	2552	15.0	-27	True	AATAAA	-25
PB.11502.1	chr9	+	1344	8	full-splice_match	CHMP5	ENST00000223500.8	1477	8	103	30	103	-30	multi-exon	FALSE	canonical	1	403878	junction_7	315576.148312374	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	35	694	50.0	-4	True	AATAAA	-12
PB.1024.1	chr1	-	2295	2	full-splice_match	MIR181A1HG	ENST00000436880.2	2308	2	-15	28	-15	-28	multi-exon	TRUE	canonical	1	27723	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	178	False	NA	NA
PB.2731.1	chr12	+	2179	1	novel_in_catalog	LINC02389	novel	3546	3	NA	NA	16210	-72449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-17
PB.296.1	chr1	-	2457	4	full-splice_match	SNIP1	ENST00000296215.7	4605	4	49	2099	-5	142	multi-exon	FALSE	canonical	1	116363	junction_1	28866.034342574087	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	67	1257	45.0	-3	True	AATAAA	-7
PB.296.2	chr1	-	2114	4	full-splice_match	SNIP1	ENST00000296215.7	4605	4	41	2450	-13	-209	multi-exon	FALSE	canonical	1	116363	junction_1	28866.034342574087	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	75	1265	15.0	-11	True	AATAAA	-15
PB.478.4	chr1	-	2280	9	full-splice_match	CRYZ	ENST00000340866.9	1888	9	-402	10	-24	-6	multi-exon	FALSE	canonical	1	392025	junction_8	113446.22004714116	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	491	1480	40.0	-168	False	AATAAA	-9
PB.6708.15	chr2	+	3544	13	novel_not_in_catalog	DDX18	novel	3796	14	NA	NA	62	-1	any annotated donor/acceptor	FALSE	canonical	1	8608	junction_11	140045.47739065473	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	67	1890	15.0	0	True	NA	NA
PB.478.3	chr1	-	4916	7	novel_in_catalog	CRYZ	novel	1592	7	NA	NA	1	-1	intron_retention	FALSE	canonical	1	392025	junction_6	111705.62412579473	NA	2	NA	TRUE	NA	NA	NA	C	coding	250	753	119	871	20.0	-13	True	AATAAA	-16
PB.6693.8	chr2	+	2033	19	novel_not_in_catalog	TMEM87B	novel	5212	19	NA	NA	-144	153	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	69864.8747475934	NA	1	1	TRUE	NA	NA	NA	B	coding	555	1668	17	1684	30.0	-2	True	ATTAAA	-15
PB.6936.7	chr2	+	2350	6	full-splice_match	SGO2	ENST00000409203.3	1041	6	41	-1350	41	1350	multi-exon	FALSE	canonical	1	66305	junction_1	27547.59306799779	NA	2	NA	TRUE	NA	NA	NA	C	coding	247	744	48	791	80.0	1	True	NA	NA
PB.478.2	chr1	-	1950	10	full-splice_match	CRYZ	ENST00000417775.5	2301	10	359	-8	12	0	multi-exon	FALSE	canonical	1	73086	junction_8	224539.0549558015	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	147	1136	20.0	-2	True	AATAAA	-23
PB.478.1	chr1	-	2123	8	full-splice_match	CRYZ	ENST00000370871.7	1292	8	-24	-807	15	317	multi-exon	FALSE	canonical	1	80925	junction_2	195172.86635969978	NA	5	NA	TRUE	NA	NA	NA	C	coding	295	888	105	992	35.0	1	True	AATAAA	-16
PB.6693.6	chr2	+	2830	6	incomplete-splice_match	TMEM87B	ENST00000283206.8	5212	19	52	40115	52	-2208	3prime_fragment	FALSE	canonical	1	91631	junction_1	32002.291102981984	NA	1	1	TRUE	NA	NA	NA	B	coding	236	711	318	1028	70.0	6	True	NA	NA
PB.11119.10	chr8	+	2114	9	incomplete-splice_match	FNTA	ENST00000529687.5	1950	10	-41	0	40	0	intron_retention	FALSE	canonical	1	5335	junction_1	160458.19866396475	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	930	1616	55.0	-6475	False	AATAAA	-16
PB.6693.5	chr2	+	3296	11	incomplete-splice_match	TMEM87B	ENST00000283206.8	5212	19	46	25666	46	-3500	3prime_fragment	FALSE	canonical	1	91631	junction_1	51037.255757044775	NA	2	1	TRUE	NA	NA	NA	B	coding	404	1215	324	1538	35.0	0	True	AATAAA	-36
PB.6693.4	chr2	+	3009	19	novel_not_in_catalog	TMEM87B	novel	5212	19	NA	NA	-216	1057	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	69864.8747475934	NA	0	NA	TRUE	NA	NA	NA	B	coding	555	1668	89	1756	35.0	-74	False	ATTAAA	-15
PB.6392.7	chr2	+	3657	16	full-splice_match	CLIP4	ENST00000320081.9	4293	16	79	557	79	-557	multi-exon	FALSE	canonical	1	58150	junction_1	57176.06582105254	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	177	2294	20.0	22	True	ATTAAA	-20
PB.6693.3	chr2	+	3411	19	novel_not_in_catalog	TMEM87B	novel	5212	19	NA	NA	145	1323	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	69864.8747475934	NA	1	1	TRUE	NA	NA	NA	B	coding	555	1668	225	1892	70.0	-210	False	NA	NA
PB.610.10	chr1	-	1300	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	8	216	combination_of_known_junctions	FALSE	canonical	1	29470	junction_8	288175.56930124864	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	248	1048	30.0	7	True	AATAAA	-15
PB.6693.2	chr2	+	2845	19	novel_not_in_catalog	TMEM87B	novel	5212	19	NA	NA	102	714	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	69864.8747475934	NA	1	1	TRUE	NA	NA	NA	B	coding	555	1668	268	1935	35.0	-2	True	AATAAA	-23
PB.7500.3	chr21	-	4025	22	full-splice_match	GART	ENST00000381815.8	3341	22	26	-710	2	710	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	1	NA	TRUE	NA	NA	NA	C	coding	1010	3033	90	3122	75.0	-1	True	NA	NA
PB.6632.13	chr2	+	3225	7	full-splice_match	CIAO1	ENST00000488633.1	1533	7	323	-2015	209	311	multi-exon	FALSE	canonical	1	504384	junction_1	140372.9174401767	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	2	916	90.0	127	False	NA	NA
PB.6693.1	chr2	+	4864	19	novel_not_in_catalog	TMEM87B	novel	5212	19	NA	NA	-155	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	69864.8747475934	NA	1	1	TRUE	NA	NA	NA	B	coding	555	1668	28	1695	30.0	-13	True	AATAAA	-16
PB.6735.6	chr2	-	3643	20	novel_in_catalog	SAP130	novel	4173	21	NA	NA	-11	-345	combination_of_known_junctions	FALSE	canonical	1	49877	junction_6	74434.13041414334	NA	0	NA	TRUE	NA	NA	NA	C	coding	1022	3069	138	3206	10.0	49	False	AATAAA	-19
PB.11737.3	chr9	-	2329	10	full-splice_match	WDR31	ENST00000465205.2	2255	10	-74	0	-30	0	multi-exon	FALSE	canonical	1	7953	junction_7	7235.658813759518	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	536	1264	95.0	-35	False	NA	NA
PB.6735.4	chr2	-	2058	8	novel_not_in_catalog	SAP130	novel	4173	21	NA	NA	48736	2	any annotated donor/acceptor	FALSE	canonical	1	488	junction_7	108317.46245690047	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	60	1274	10.0	NA	False	AATAAA	-22
PB.2499.14	chr12	+	2977	5	full-splice_match	GOLT1B	ENST00000229314.9	3227	5	-1	251	-1	-251	multi-exon	FALSE	canonical	1	236872	junction_2	100997.67009781711	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	111	527	30.0	-1	True	AATAAA	-17
PB.2499.13	chr12	+	3388	6	full-splice_match	GOLT1B	ENST00000539025.5	1210	6	-15	-2163	-1	-6	multi-exon	FALSE	canonical	1	22629	junction_3	209788.7427193366	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-31
PB.2499.12	chr12	+	3222	5	full-splice_match	GOLT1B	ENST00000229314.9	3227	5	-1	6	-1	-6	multi-exon	FALSE	canonical	1	236872	junction_2	100997.67009781711	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	111	527	40.0	-1	True	AATAAA	-31
PB.2499.11	chr12	+	7591	1	novel_in_catalog	GOLT1B	novel	813	3	NA	NA	-9	1441	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-9	True	NA	NA
PB.2499.10	chr12	+	4261	5	novel_in_catalog	GOLT1B	novel	813	3	NA	NA	3	-251	intron_retention	FALSE	canonical	1	18107	junction_2	190086.39287308283	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-19	True	AATAAA	-17
PB.8662.17	chr4	+	4237	4	incomplete-splice_match	NSD2	ENST00000382888.3	2666	12	22532	-3279	-150	-9	5prime_fragment	FALSE	canonical	1	450990	junction_3	88156.75060683416	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	155	952	25.0	0	True	ATTAAA	-17
PB.11502.2	chr9	+	1952	8	full-splice_match	CHMP5	ENST00000223500.8	1477	8	57	-532	57	2	multi-exon	FALSE	canonical	1	403878	junction_7	315576.148312374	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	81	740	20.0	-781	False	AATAAA	-17
PB.4218.2	chr16	-	1112	6	full-splice_match	NMRAL1	ENST00000283429.10	1376	6	260	4	8	-4	multi-exon	FALSE	canonical	1	163304	junction_5	152263.02244550383	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	117	1016	30.0	-12	True	AATAAA	-26
PB.3758.16	chr15	-	5567	24	novel_not_in_catalog	GOLGA8B	novel	4335	16	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	818	junction_14	123589.32821770797	NA	2	1	TRUE	NA	NA	NA	C	coding	460	1383	2210	3592	40.0	-17	True	AATAAA	-17
PB.4218.1	chr16	-	1238	6	full-splice_match	NMRAL1	ENST00000574425.5	1240	6	16	-14	-2	-1	multi-exon	FALSE	canonical	1	56911	junction_5	192509.9801392125	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	240	1139	30.0	-4	True	AATAAA	-29
PB.6973.12	chr2	+	2077	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	32	5479	4	163	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	206	1183	45.0	-18	True	AATAAA	-20
PB.6632.10	chr2	+	4055	6	novel_in_catalog	CIAO1	novel	1533	7	NA	NA	-4	314	intron_retention	FALSE	canonical	1	504384	junction_1	150056.8468219961	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	115	819	100.0	0	True	NA	NA
PB.3758.17	chr15	-	3585	25	novel_not_in_catalog	GOLGA8B	novel	4335	16	NA	NA	0	-254	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_17	121459.05260447401	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	1490	3166	20.0	-17	True	GATAAA	-19
PB.7742.39	chr22	-	7202	41	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	3107	-369	any annotated donor/acceptor	FALSE	canonical	1	142	junction_40	1142480.6542268973	NA	0	NA	TRUE	NA	NA	NA	C	coding	1960	5883	298	6180	10.0	3043	False	AATAAA	-14
PB.7742.38	chr22	-	7144	41	full-splice_match	MYH9	ENST00000216181.10	7554	41	41	369	41	-369	multi-exon	FALSE	canonical	1	1396727	junction_40	1055341.6205174795	NA	4	NA	TRUE	NA	NA	NA	C	coding	1960	5883	240	6122	10.0	-23	False	AATAAA	-14
PB.11335.3	chr8	+	2365	11	full-splice_match	SQLE	ENST00000265896.9	2961	11	594	2	556	0	multi-exon	FALSE	canonical	1	606505	junction_4	176465.09828178489	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	305	2029	10.0	-6461	False	AATAAA	-11
PB.11335.2	chr8	+	3631	10	incomplete-splice_match	SQLE	ENST00000265896.9	2961	11	208	3	170	-1	intron_retention	FALSE	canonical	1	606505	junction_4	122741.94819756338	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	691	2226	10.0	-6847	False	AATAAA	-10
PB.7742.35	chr22	-	4703	29	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	110	-365	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	824412.9090213376	NA	1	NA	TRUE	NA	NA	NA	C	coding	1271	3816	171	3986	10.0	9	True	AATAAA	-18
PB.7518.8	chr21	-	3657	8	full-splice_match	VPS26C	ENST00000309117.10	3256	8	-407	6	-20	-6	multi-exon	FALSE	canonical	1	296255	junction_7	58409.297192575534	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	646	1539	25.0	-386	False	AATAAA	-16
PB.7742.37	chr22	-	3554	23	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	71	-365	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	746804.5497840011	NA	2	1	TRUE	NA	NA	NA	C	coding	1040	3123	210	3332	10.0	7	True	AATAAA	-18
PB.7742.31	chr22	-	5437	33	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	107	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	822280.4805754949	NA	4	2	TRUE	NA	NA	NA	C	coding	1510	4533	174	4706	20.0	6	True	AATAAA	-14
PB.4893.1	chr17	+	841	1	full-splice_match	AC116407.2	ENST00000613639.1	860	1	17	2	17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-5	True	ATTAAA	-14
PB.7518.9	chr21	-	2925	7	full-splice_match	VPS26C	ENST00000398998.1	988	7	182	-2119	1	-5	multi-exon	FALSE	canonical	1	5079	junction_6	153043.394841318	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	57	806	30.0	-17	True	AATAAA	-17
PB.7326.4	chr20	-	3126	7	novel_in_catalog	NCOA5	novel	3220	8	NA	NA	9	-18	combination_of_known_junctions	FALSE	canonical	1	14269	junction_6	130468.52637801196	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	405	1829	70.0	0	True	AATAAA	-23
PB.6568.3	chr2	-	2838	9	full-splice_match	CCDC142	ENST00000290418.4	2835	9	-3	0	-3	0	multi-exon	FALSE	canonical	1	8766	junction_6	20400.500961603248	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	163	2394	100.0	-2	True	NA	NA
PB.7326.1	chr20	-	3215	8	full-splice_match	NCOA5	ENST00000290231.10	3220	8	-10	15	-10	-15	multi-exon	TRUE	canonical	1	102794	junction_7	101889.8945955578	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	176	1915	55.0	-19	True	AATAAA	-26
PB.6729.8	chr2	-	5944	4	novel_in_catalog	IWS1	novel	2958	14	NA	NA	1	3470	intron_retention	FALSE	canonical	1	306714	junction_3	74589.25499471533	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	258	1670	90.0	23	True	NA	NA
PB.7326.3	chr20	-	3682	7	novel_in_catalog	NCOA5	novel	3220	8	NA	NA	-10	-18	intron_retention	FALSE	canonical	1	102794	junction_6	106646.02905093717	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	176	1360	70.0	-19	True	AATAAA	-23
PB.7326.2	chr20	-	3238	8	novel_not_in_catalog	NCOA5	novel	3220	8	NA	NA	-10	-15	any annotated donor/acceptor	FALSE	canonical	1	94349	junction_1	118495.0019541856	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	176	1396	55.0	-19	True	AATAAA	-26
PB.6729.5	chr2	-	2414	11	incomplete-splice_match	IWS1	ENST00000295321.8	2958	14	-50	9081	-29	-9077	3prime_fragment	FALSE	canonical	1	306714	junction_10	119977.70075347336	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2103	311	2413	50.0	-30	False	NA	NA
PB.6729.4	chr2	-	2708	14	full-splice_match	IWS1	ENST00000295321.8	2958	14	-51	301	-30	-297	multi-exon	FALSE	canonical	1	306714	junction_13	140874.502572388	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2397	312	2708	55.0	-31	False	GATAAA	-28
PB.6729.7	chr2	-	1852	6	incomplete-splice_match	IWS1	ENST00000295321.8	2958	14	-42	17349	-21	4424	3prime_fragment	FALSE	canonical	1	306714	junction_5	137302.81620505822	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1548	303	1850	60.0	-22	True	NA	NA
PB.6729.6	chr2	-	1999	8	incomplete-splice_match	IWS1	ENST00000295321.8	2958	14	-1	14127	-1	7646	3prime_fragment	FALSE	canonical	1	306714	junction_7	130793.54368388279	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1737	262	1998	60.0	19	True	NA	NA
PB.6729.1	chr2	-	2959	14	full-splice_match	IWS1	ENST00000295321.8	2958	14	-3	2	-3	-2	multi-exon	FALSE	canonical	1	306714	junction_13	140874.502572388	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	264	2723	5.0	17	True	AATAAA	-19
PB.7500.1	chr21	-	3700	23	novel_not_in_catalog	GART	novel	3341	22	NA	NA	-2	5412	any annotated donor/acceptor	FALSE	canonical	1	25365	junction_1	210052.8095597491	NA	1	NA	TRUE	NA	NA	NA	C	coding	1037	3114	118	3231	25.0	751	False	AATAAA	-21
PB.6729.3	chr2	-	2876	13	novel_in_catalog	IWS1	novel	441	4	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	1	6856	junction_12	202511.33115636325	NA	2	1	TRUE	NA	NA	NA	C	coding	612	1839	808	2646	0.0	-22	True	AATAAA	-13
PB.6729.2	chr2	-	2753	14	novel_in_catalog	IWS1	novel	441	4	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	2642	junction_13	196834.60622271703	NA	2	NA	TRUE	NA	NA	NA	C	coding	826	2481	41	2521	5.0	11	True	AATAAA	-15
PB.3471.6	chr14	+	4334	25	novel_not_in_catalog	DAAM1	novel	2844	2	NA	NA	20	0	any annotated donor/acceptor	FALSE	canonical	1	18050	junction_1	57563.171410473886	NA	8	NA	TRUE	NA	NA	NA	C	coding	1068	3207	234	3440	100.0	50	True	GATAAA	-8
PB.831.2	chr1	-	4006	2	full-splice_match	ISG20L2	ENST00000496538.1	872	2	-1069	-2065	-14	-2	multi-exon	FALSE	canonical	1	182439	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	332	999	804	1802	25.0	-11	True	GATAAA	-19
PB.3471.4	chr14	+	4511	25	full-splice_match	DAAM1	ENST00000360909.7	4227	25	-3	-281	-3	281	multi-exon	FALSE	canonical	1	123874	junction_13	47071.82782444692	NA	4	NA	TRUE	NA	NA	NA	C	coding	1068	3207	130	3336	60.0	8	True	AATAAA	-18
PB.3471.5	chr14	+	1565	13	incomplete-splice_match	DAAM1	ENST00000360909.7	4227	25	21	39165	2	4473	3prime_fragment	FALSE	canonical	1	138546	junction_12	28166.66749741123	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1458	106	1563	70.0	32	True	NA	NA
PB.3471.2	chr14	+	3064	24	incomplete-splice_match	DAAM1	ENST00000360909.7	4227	25	-10	2223	-10	-17	3prime_fragment	FALSE	canonical	1	123874	junction_13	35315.22915331612	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2928	137	3064	70.0	1	True	NA	NA
PB.3471.3	chr14	+	2814	2	full-splice_match	DAAM1	ENST00000556596.1	2844	2	30	0	-4	0	multi-exon	FALSE	canonical	1	146878	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	110	333	1378	1710	90.0	7	True	TTTAAA	-36
PB.3471.1	chr14	+	4239	25	full-splice_match	DAAM1	ENST00000360909.7	4227	25	-11	-1	-11	1	multi-exon	FALSE	canonical	1	123874	junction_13	47071.82782444692	NA	1	NA	TRUE	NA	NA	NA	C	coding	1068	3207	138	3344	100.0	0	True	GATAAA	-9
PB.6962.4	chr2	+	3821	9	novel_in_catalog	ABI2	novel	22209	11	NA	NA	-3	998	combination_of_known_junctions	FALSE	canonical	1	187621	junction_7	67184.69453852101	NA	7	NA	TRUE	NA	NA	NA	C	coding	446	1341	239	1579	60.0	-27	True	NA	NA
PB.3580.24	chr14	+	3563	4	full-splice_match	GPATCH2L	ENST00000556663.5	2112	4	-1664	213	46	-213	multi-exon	FALSE	canonical	1	227289	junction_3	16731.844017388587	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	2383	3438	55.0	0	True	AATAAA	-18
PB.3580.22	chr14	+	2572	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	15	11420	15	135	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	52	1500	40.0	29	True	NA	NA
PB.3580.23	chr14	+	4226	10	novel_in_catalog	GPATCH2L	novel	1791	11	NA	NA	40	-4	intron_retention	FALSE	canonical	1	8259	junction_1	76705.48296062168	NA	9	1	TRUE	NA	NA	NA	C	coding	482	1449	1845	3293	15.0	-569	False	AGTAAA	-18
PB.3580.20	chr14	+	2685	9	incomplete-splice_match	GPATCH2L	ENST00000261530.11	14007	10	1	17039	1	719	3prime_fragment	FALSE	canonical	1	137170	junction_1	39139.15240443385	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	66	1406	5.0	15	True	ATTAAA	-20
PB.3580.21	chr14	+	6954	10	full-splice_match	GPATCH2L	ENST00000312858.9	2438	10	11	-4527	10	4527	multi-exon	FALSE	canonical	1	12431	junction_7	95649.78124619232	NA	8	NA	TRUE	NA	NA	NA	C	coding	477	1434	57	1490	75.0	24	True	NA	NA
PB.831.1	chr1	-	2512	5	novel_not_in_catalog	ISG20L2	novel	3178	3	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	202861.77855993476	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	149	1210	20.0	-1	True	GATAAA	-20
PB.6962.6	chr2	+	6382	9	novel_in_catalog	ABI2	novel	22209	11	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	1	38961	junction_5	115157.42817762289	NA	9	NA	TRUE	NA	NA	NA	C	coding	445	1338	233	1570	15.0	-21	True	AATAAA	-11
PB.9037.1	chr4	+	2683	10	full-splice_match	GUCY1A1	ENST00000506455.5	2715	10	16	16	1	0	multi-exon	TRUE	canonical	1	41867	junction_1	52072.922789127835	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	426	2498	80.0	16	True	NA	NA
PB.7518.1	chr21	-	4706	8	full-splice_match	VPS26C	ENST00000309117.10	3256	8	200	-1650	-3	1650	multi-exon	FALSE	canonical	1	296255	junction_7	58409.297192575534	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	39	932	70.0	1	True	NA	NA
PB.6962.8	chr2	+	3865	9	novel_in_catalog	ABI2	novel	22209	11	NA	NA	0	1157	combination_of_known_junctions	FALSE	canonical	1	187621	junction_7	67184.69453852101	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	124	1464	85.0	-2	True	NA	NA
PB.10306.5	chr6	+	4699	17	novel_not_in_catalog	TMEM181	novel	5390	17	NA	NA	23655	-403	any annotated donor/acceptor	FALSE	canonical	1	65821	junction_1	54956.08904669795	NA	1	NA	TRUE	NA	NA	NA	B	coding	475	1428	135	1562	85.0	-26	True	NA	NA
PB.3667.19	chr14	+	3462	13	full-splice_match	PPP2R5C	ENST00000350249.7	3845	13	67	316	1	-316	multi-exon	FALSE	canonical	1	460	junction_5	226263.32816842894	NA	3	1	TRUE	NA	NA	NA	C	coding	475	1428	104	1531	60.0	4	True	NA	NA
PB.3667.18	chr14	+	4365	14	full-splice_match	PPP2R5C	ENST00000334743.9	4328	14	-25	-12	1	0	multi-exon	FALSE	canonical	1	460	junction_5	229653.88388227404	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	104	1648	40.0	4	True	AATAAA	-29
PB.9962.10	chr6	+	3592	1	novel_in_catalog	C6orf89	novel	2565	10	NA	NA	114	-33953	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	16	NA	NA	NA	NA	NA	C	coding	114	345	1	345	90.0	26	True	NA	NA
PB.4335.12	chr16	+	2560	18	incomplete-splice_match	EIF3C	ENST00000566866.5	2986	20	2480	1	748	0	5prime_fragment	FALSE	canonical	1	11983	junction_4	92653.50030735024	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	123	2477	5.0	2513	False	ACTAAA	-16
PB.3667.14	chr14	+	2544	11	novel_in_catalog	PPP2R5C	novel	4481	16	NA	NA	-5	0	intron_retention	FALSE	canonical	1	460	junction_4	224935.56832482052	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	1926	2417	25.0	-5	True	AATAAA	-21
PB.4335.10	chr16	+	2776	20	full-splice_match	EIF3C	ENST00000566866.5	2986	20	212	-2	212	1	multi-exon	FALSE	canonical	1	11983	junction_6	88043.09038802984	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	159	2690	5.0	245	False	ACTAAA	-19
PB.4335.11	chr16	+	5285	22	novel_not_in_catalog	EIF3C	novel	3128	21	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	85331.931938987	NA	2	NA	TRUE	NA	NA	NA	C	coding	597	1794	3410	5203	5.0	1	True	ACTAAA	-15
PB.3667.11	chr14	+	3689	14	full-splice_match	PPP2R5C	ENST00000334743.9	4328	14	-29	668	0	-210	multi-exon	FALSE	canonical	1	460	junction_5	229653.88388227404	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	108	1652	70.0	0	True	NA	NA
PB.3667.10	chr14	+	4268	13	full-splice_match	PPP2R5C	ENST00000350249.7	3845	13	34	-457	0	-1	multi-exon	FALSE	canonical	1	460	junction_5	226263.32816842894	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	137	1564	40.0	2	True	AATAAA	-16
PB.3667.13	chr14	+	3588	14	full-splice_match	PPP2R5C	ENST00000334743.9	4328	14	-34	774	-5	-316	multi-exon	FALSE	canonical	1	460	junction_5	229653.88388227404	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	113	1657	60.0	-5	True	NA	NA
PB.3667.12	chr14	+	1417	12	full-splice_match	PPP2R5C	ENST00000445439.7	1526	12	-38	147	-9	-122	multi-exon	FALSE	canonical	1	460	junction_5	234407.84673038754	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1299	117	1415	70.0	-9	True	AATAGA	-31
PB.266.4	chr1	-	5979	6	full-splice_match	AK2	ENST00000354858.10	1021	6	99	-5057	-7	-3	multi-exon	FALSE	canonical	1	632	junction_3	268655.53988525906	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	66	785	25.0	-15	True	NA	NA
PB.4364.2	chr16	-	2390	13	full-splice_match	SMG1P5	ENST00000411546.3	2362	13	-25	-3	-25	3	multi-exon	TRUE	canonical	1	285	junction_12	18165.581618016895	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	1641	2222	10.0	27	False	AATAAA	-33
PB.266.6	chr1	-	2699	7	full-splice_match	AK2	ENST00000373449.6	3586	7	-12	899	4	-899	multi-exon	FALSE	canonical	1	632	junction_4	246175.01132979	NA	13	NA	TRUE	NA	NA	NA	C	coding	232	699	55	753	10.0	-4	True	AATAAA	-15
PB.266.7	chr1	-	2799	8	novel_in_catalog	AK2	novel	3576	6	NA	NA	6	-897	combination_of_known_junctions	FALSE	canonical	1	632	junction_4	156043.08941338435	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	297	851	10.0	69	False	AATAAA	-17
PB.266.1	chr1	-	7375	6	full-splice_match	AK2	ENST00000354858.10	1021	6	129	-6483	5	1379	multi-exon	FALSE	canonical	1	632	junction_3	268655.53988525906	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	36	755	20.0	68	False	AATAAA	-16
PB.266.2	chr1	-	3601	7	full-splice_match	AK2	ENST00000373449.6	3586	7	-13	-2	3	2	multi-exon	FALSE	canonical	1	632	junction_4	246175.01132979	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	56	754	20.0	-5	True	NA	NA
PB.266.3	chr1	-	3692	8	novel_in_catalog	AK2	novel	3576	6	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	632	junction_4	156043.08941338435	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	295	849	20.0	71	False	NA	NA
PB.7966.3	chr3	+	3926	9	full-splice_match	OXNAD1	ENST00000285083.9	3929	9	6	-3	-2	3	multi-exon	FALSE	canonical	1	129348	junction_1	65094.86496212662	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	460	1398	20.0	-9	True	ATTAAA	-19
PB.7966.2	chr3	+	1457	9	full-splice_match	OXNAD1	ENST00000285083.9	3929	9	-7	2479	-7	-375	multi-exon	FALSE	canonical	1	129348	junction_1	65094.86496212662	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	473	1411	10.0	-22	True	AATAAA	-20
PB.7966.1	chr3	+	1863	9	full-splice_match	OXNAD1	ENST00000285083.9	3929	9	-11	2077	-11	27	multi-exon	FALSE	canonical	1	129348	junction_1	65094.86496212662	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	477	1415	35.0	-26	True	AATACA	-21
PB.266.8	chr1	-	2613	8	novel_not_in_catalog	AK2	novel	3576	6	NA	NA	1	-897	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	244999.87285036268	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	83	781	10.0	21	False	AATAAA	-17
PB.266.9	chr1	-	2587	6	full-splice_match	AK2	ENST00000548033.5	936	6	-54	-1597	-8	-897	multi-exon	FALSE	canonical	1	632	junction_4	175268.1665807	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	67	639	10.0	-16	True	AATAAA	-17
PB.7966.4	chr3	+	1915	10	novel_not_in_catalog	OXNAD1	novel	3983	9	NA	NA	-1	26	any annotated donor/acceptor	FALSE	canonical	1	3028	junction_4	100537.49772320995	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-5	True	AATACA	-20
PB.9417.7	chr5	-	2652	5	full-splice_match	ZNF608	ENST00000509799.5	2605	5	-73	26	-73	0	multi-exon	FALSE	canonical	1	17227	junction_4	27498.23943909864	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2121	532	2652	60.0	-44	False	NA	NA
PB.11289.3	chr8	+	1860	11	full-splice_match	DCAF13	ENST00000612750.4	1967	11	-30	137	-6	-134	multi-exon	FALSE	canonical	1	195117	junction_4	159386.95245122796	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	89	1426	25.0	-60	True	NA	NA
PB.4364.1	chr16	-	2530	14	novel_not_in_catalog	SMG1P5	novel	4219	29	NA	NA	-45	3	any annotated donor/acceptor	FALSE	canonical	1	285	junction_13	15810.403023056662	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	1781	2362	10.0	7	True	AATAAA	-33
PB.11289.5	chr8	+	2093	11	full-splice_match	DCAF13	ENST00000612750.4	1967	11	-3	-123	1	123	multi-exon	FALSE	canonical	1	195117	junction_4	159386.95245122796	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	62	1399	40.0	-33	True	AATAAA	-26
PB.11289.4	chr8	+	2342	11	full-splice_match	DCAF13	ENST00000612750.4	1967	11	-8	-367	2	367	multi-exon	FALSE	canonical	1	195117	junction_4	159386.95245122796	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	67	1404	40.0	-38	True	NA	NA
PB.11289.7	chr8	+	1611	11	full-splice_match	DCAF13	ENST00000612750.4	1967	11	21	335	-2	141	multi-exon	FALSE	canonical	1	195117	junction_4	159386.95245122796	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	38	1375	15.0	-9	True	AATACA	-14
PB.11289.6	chr8	+	2126	5	full-splice_match	DCAF13	ENST00000519682.5	837	5	-11	-1278	-11	1	multi-exon	FALSE	canonical	1	195117	junction_4	186365.27102624968	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	47	712	90.0	-18	True	TTTAAA	-41
PB.5466.27	chr18	-	2794	11	full-splice_match	PIAS2	ENST00000590127.5	1838	11	-33	-923	-2	-71	multi-exon	FALSE	canonical	1	90183	junction_10	34004.316846688744	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	163	1686	25.0	-3	True	ATTAAA	-16
PB.5466.26	chr18	-	1906	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-4	2641	-2	-161	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	163	1881	40.0	-3	True	AATAAA	-14
PB.5466.25	chr18	-	2022	14	novel_in_catalog	PIAS2	novel	11075	14	NA	NA	-5	-157	combination_of_known_junctions	FALSE	canonical	1	14288	junction_13	64038.052328838094	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	302	1993	40.0	-6	True	AATAAA	-18
PB.5466.24	chr18	-	2033	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-1	2511	1	-31	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	160	1878	35.0	0	True	ATTAAA	-24
PB.5466.23	chr18	-	2372	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-8	2179	-6	301	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	167	1885	45.0	-7	True	AGTAAA	-20
PB.5466.22	chr18	-	3126	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-11	1428	-9	1052	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	170	1888	70.0	-10	True	TATAAA	-18
PB.5466.21	chr18	-	3609	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-4	938	-2	-938	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	163	1881	80.0	-3	True	NA	NA
PB.5466.20	chr18	-	3783	13	novel_not_in_catalog	PIAS2	novel	11075	14	NA	NA	-1	-782	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	57817.98471370449	NA	5	1	TRUE	NA	NA	NA	C	coding	552	1659	162	1820	90.0	-2	True	NA	NA
PB.5876.3	chr19	+	3903	5	novel_in_catalog	ZNF430	novel	3923	5	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	35553	junction_3	18834.081187769687	NA	4	NA	TRUE	NA	NA	NA	C	coding	569	1710	170	1879	35.0	-5150	False	AATAAA	-15
PB.5876.2	chr19	+	2312	5	full-splice_match	ZNF430	ENST00000261560.9	3923	5	7	1604	7	0	multi-exon	FALSE	canonical	1	69083	junction_1	10452.141323671432	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	175	1887	85.0	-5155	False	NA	NA
PB.5876.1	chr19	+	2597	5	full-splice_match	ZNF430	ENST00000261560.9	3923	5	-1	1327	-1	277	multi-exon	FALSE	canonical	1	69083	junction_1	10452.141323671432	NA	2	NA	TRUE	NA	NA	NA	C	coding	570	1713	183	1895	65.0	-5163	False	AATGAA	-39
PB.9455.1	chr5	-	1203	3	full-splice_match	CDKN2AIPNL	ENST00000458198.2	1223	3	-9	29	-9	-29	multi-exon	FALSE	canonical	1	87809	junction_1	89298.5	NA	14	NA	TRUE	NA	NA	NA	A	coding	116	351	54	404	75.0	-1	True	NA	NA
PB.2953.1	chr12	-	2102	2	full-splice_match	NRAV	ENST00000500741.2	1901	2	11	-212	11	212	multi-exon	FALSE	canonical	1	86393	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-21	True	NA	NA
PB.5876.5	chr19	+	3589	3	full-splice_match	ZNF430	ENST00000595833.1	502	3	-2	-3085	-2	0	multi-exon	FALSE	canonical	1	69083	junction_1	7650.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	105	318	147	464	90.0	-2	True	NA	NA
PB.5876.4	chr19	+	3402	5	full-splice_match	ZNF430	ENST00000261560.9	3923	5	14	507	0	-507	multi-exon	FALSE	canonical	1	69083	junction_1	10452.141323671432	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	168	1880	95.0	-5148	False	NA	NA
PB.6714.5	chr2	+	3263	26	novel_in_catalog	PTPN4	novel	10300	27	NA	NA	-92	-26	no_combination_of_known_junctions	FALSE	canonical	1	8164	junction_5	33708.54615302179	NA	4	NA	TRUE	NA	NA	NA	C	coding	907	2721	541	3261	70.0	-345	False	NA	NA
PB.6714.4	chr2	+	3412	27	full-splice_match	PTPN4	ENST00000263708.6	10300	27	231	6657	-92	78	multi-exon	FALSE	canonical	1	68379	junction_11	27714.53288748698	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	541	3321	70.0	-345	False	NA	NA
PB.5955.1	chr19	-	3043	5	novel_not_in_catalog	ZNF790	novel	3037	5	NA	NA	33	-30	any annotated donor/acceptor	FALSE	canonical	1	697	junction_4	25913.173430708946	NA	2	NA	TRUE	NA	NA	NA	A	coding	636	1911	158	2068	70.0	349	False	NA	NA
PB.9838.3	chr6	+	1579	3	full-splice_match	PPP1R11	ENST00000376772.7	1731	3	149	3	32	-3	multi-exon	FALSE	canonical	1	252715	junction_1	125600.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	175	555	35.0	21	True	AATAAA	-16
PB.10912.1	chr7	+	4430	6	full-splice_match	ZNF783	ENST00000434415.5	4452	6	21	1	21	-1	multi-exon	FALSE	canonical	1	45847	junction_1	45936.53852697219	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	143	1783	10.0	-7	True	AATAAA	-17
PB.7993.1	chr3	-	5290	5	intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	356	junction_1	2061.9082181319322	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-7	True	NA	NA
PB.6714.1	chr2	+	3749	27	full-splice_match	PTPN4	ENST00000263708.6	10300	27	190	6361	-133	-4	multi-exon	FALSE	canonical	1	68379	junction_11	27714.53288748698	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	582	3362	5.0	-386	False	AGTAAA	-15
PB.2943.3	chr12	-	8693	48	novel_in_catalog	CIT	novel	8708	48	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	1	51993	junction_47	36144.135895776104	NA	2	NA	TRUE	NA	NA	NA	B	coding	2054	6165	90	6254	25.0	-18	True	AATAAA	-16
PB.2943.2	chr12	-	8743	49	novel_not_in_catalog	CIT	novel	8708	48	NA	NA	-38	0	any annotated donor/acceptor	FALSE	canonical	1	29587	junction_12	39224.670714307256	NA	25	2	TRUE	NA	NA	NA	B	coding	2069	6210	95	6304	25.0	-23	True	AATAAA	-16
PB.3271.6	chr13	+	1968	6	novel_in_catalog	LAMP1	novel	2699	9	NA	NA	-11	1	no_combination_of_known_junctions	FALSE	canonical	1	7568	junction_1	1122741.8626414533	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	206	958	5.0	-9	True	AATAAA	-21
PB.3271.7	chr13	+	2018	6	incomplete-splice_match	LAMP1	ENST00000332556.4	2699	9	-10	2264	-10	-1186	intron_retention	FALSE	canonical	1	974835	junction_1	689997.2439633653	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	205	1224	15.0	-8	True	ATTAAA	-25
PB.2943.7	chr12	-	8323	48	novel_in_catalog	CIT	novel	8708	48	NA	NA	-16	-353	combination_of_known_junctions	FALSE	canonical	1	51993	junction_47	36144.135895776104	NA	7	NA	TRUE	NA	NA	NA	B	coding	2054	6165	73	6237	75.0	-1	True	AAGAAA	-13
PB.3271.1	chr13	+	2334	9	full-splice_match	LAMP1	ENST00000332556.4	2699	9	119	246	119	-4	multi-exon	FALSE	canonical	1	974835	junction_1	615498.2408047438	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	76	1329	0.0	-279	False	AATAAA	-16
PB.3271.2	chr13	+	2687	9	full-splice_match	LAMP1	ENST00000332556.4	2699	9	10	2	10	-2	multi-exon	FALSE	canonical	1	974835	junction_1	615498.2408047438	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	185	1438	35.0	12	True	TTTAAA	-27
PB.3271.3	chr13	+	4047	6	incomplete-splice_match	LAMP1	ENST00000332556.4	2699	9	-21	246	-21	-4	intron_retention	FALSE	canonical	1	974835	junction_1	689997.2439633653	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	216	1235	0.0	-19	True	AATAAA	-16
PB.10079.1	chr6	-	6039	29	full-splice_match	IBTK	ENST00000306270.11	6054	29	10	5	10	-2	multi-exon	TRUE	canonical	1	141086	junction_28	74919.24746082052	NA	0	NA	TRUE	NA	NA	NA	C	coding	1353	4062	541	4602	25.0	-1	True	AGTAAA	-17
PB.7845.6	chr22	-	1385	4	full-splice_match	MCAT	ENST00000290429.10	2056	4	-4	675	-4	-1	multi-exon	FALSE	canonical	1	170610	junction_1	35649.41464690082	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	51	1223	25.0	-11	True	CATAAA	-18
PB.7845.5	chr22	-	3274	3	full-splice_match	MCAT	ENST00000327555.5	1134	3	-60	-2080	-30	1406	multi-exon	FALSE	canonical	1	98564	junction_1	74703.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	77	619	70.0	-37	False	NA	NA
PB.2943.8	chr12	-	2226	12	incomplete-splice_match	CIT	ENST00000612548.4	1799	13	-32	95552	-29	-1156	3prime_fragment	FALSE	canonical	1	51993	junction_11	19536.983519925772	NA	0	NA	TRUE	NA	NA	NA	B	coding	519	1560	86	1645	40.0	-14	True	ATTAAA	-17
PB.3271.8	chr13	+	2409	10	novel_not_in_catalog	LAMP1	novel	2699	9	NA	NA	-3	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	954529.5660769817	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	198	1451	5.0	-1	True	AATAAA	-21
PB.3271.9	chr13	+	3946	7	novel_in_catalog	LAMP1	novel	2699	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	974835	junction_1	635219.5736412725	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	197	1216	0.0	0	True	AATAAA	-20
PB.7845.1	chr22	-	3784	4	full-splice_match	MCAT	ENST00000290429.10	2056	4	25	-1753	-5	1753	multi-exon	FALSE	canonical	1	170610	junction_1	35649.41464690082	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	22	1194	100.0	18	True	NA	NA
PB.8448.22	chr3	+	3453	27	full-splice_match	U2SURP	ENST00000488497.7	3557	27	440	-336	-2	-10	multi-exon	FALSE	canonical	1	29118	junction_12	214285.11960827804	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	1307	3067	35.0	6	True	AATAAA	-11
PB.8448.23	chr3	+	2382	23	incomplete-splice_match	U2SURP	ENST00000473835.6	7276	28	73	21605	2	735	3prime_fragment	FALSE	canonical	1	346998	junction_9	162605.47008380629	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2364	18	2381	70.0	10	True	NA	NA
PB.8448.20	chr3	+	8364	26	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-7	5	intron_retention	FALSE	canonical	1	338381	junction_21	180757.58140897547	NA	3	NA	TRUE	NA	NA	NA	C	coding	586	1761	5396	7156	25.0	1	True	AATAAA	-30
PB.8448.21	chr3	+	2963	27	incomplete-splice_match	U2SURP	ENST00000473835.6	7276	28	64	5441	-7	1323	3prime_fragment	FALSE	canonical	1	338381	junction_23	182507.8660665174	NA	6	NA	TRUE	NA	NA	NA	C	coding	979	2937	27	2963	65.0	1	True	NA	NA
PB.8448.26	chr3	+	6666	27	novel_in_catalog	U2SURP	novel	725	6	NA	NA	5	-357	combination_of_known_junctions	FALSE	canonical	1	98355	junction_26	197146.44246941071	NA	2	NA	TRUE	NA	NA	NA	C	coding	970	2913	15	2927	20.0	13	True	ATTAAA	-22
PB.8448.27	chr3	+	5828	25	novel_in_catalog	U2SURP	novel	725	6	NA	NA	5	-78	intron_retention	FALSE	canonical	1	338381	junction_22	169155.38711835258	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1353	4474	5826	65.0	13	True	TATAAA	-39
PB.8448.24	chr3	+	7022	27	novel_in_catalog	U2SURP	novel	725	6	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	98355	junction_26	197146.44246941071	NA	2	NA	TRUE	NA	NA	NA	C	coding	970	2913	17	2929	35.0	11	True	AATAAA	-20
PB.8448.25	chr3	+	2334	22	novel_in_catalog	U2SURP	novel	725	6	NA	NA	3	735	combination_of_known_junctions	FALSE	canonical	1	29118	junction_12	203654.44969694395	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	17	1291	70.0	11	True	NA	NA
PB.192.6	chr1	+	4297	4	full-splice_match	PDIK1L	ENST00000374271.8	4279	4	-13	-5	-13	5	multi-exon	FALSE	canonical	1	5032	junction_1	27839.824907655024	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	301	1326	25.0	-4	True	AATAAA	-28
PB.517.15	chr1	+	4815	6	novel_in_catalog	HS2ST1	novel	1585	5	NA	NA	17	-1806	no_combination_of_known_junctions	FALSE	canonical	1	557	junction_4	126906.60736998684	NA	4	NA	TRUE	NA	NA	NA	C	coding	209	630	347	976	50.0	-54	True	AATAAA	-14
PB.517.14	chr1	+	2171	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	9	4556	9	-4556	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	355	1425	50.0	-62	True	NA	NA
PB.517.13	chr1	+	2665	8	novel_not_in_catalog	HS2ST1	novel	1585	5	NA	NA	4	-3780	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	111785.07806719908	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	73	1143	25.0	-67	True	TATAAA	-13
PB.517.12	chr1	+	2370	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	0	4366	0	-4366	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	364	1434	55.0	-71	True	TTTAAA	-11
PB.517.11	chr1	+	2492	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	0	4244	0	-4244	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	364	1434	10.0	-71	True	AGTAAA	-15
PB.517.10	chr1	+	2785	8	novel_not_in_catalog	HS2ST1	novel	1585	5	NA	NA	0	-3780	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	111785.07806719908	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	193	1263	25.0	-71	True	TATAAA	-13
PB.8158.1	chr3	-	1990	11	full-splice_match	POC1A	ENST00000474012.1	1760	11	-24	-206	-16	5	multi-exon	FALSE	canonical	1	7669	junction_10	54087.844968070225	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	242	1351	15.0	-35	True	ATTAAA	-21
PB.11913.2	chr9	+	3057	11	novel_not_in_catalog	TRAF2	novel	709	6	NA	NA	16	793	any annotated donor/acceptor	FALSE	canonical	1	179	junction_1	85966.36532365433	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	53	1558	20.0	-236	False	ATTAAA	-13
PB.8597.3	chr3	-	2942	4	full-splice_match	CLDN1	ENST00000295522.3	3481	4	34	505	34	-505	multi-exon	FALSE	canonical	1	285501	junction_3	60040.838109480865	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	236	871	35.0	-1	True	AATAAA	-22
PB.1006.4	chr1	+	3742	2	incomplete-splice_match	RGS13	ENST00000391995.6	1505	7	13	19089	13	-18691	intron_retention	FALSE	canonical	1	56988	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.9609.5	chr5	+	2014	14	novel_in_catalog	RARS	novel	2146	15	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	3246	junction_8	294040.3143831345	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	29	1906	30.0	0	True	AGTAAA	-16
PB.9609.4	chr5	+	2582	15	novel_not_in_catalog	RARS	novel	2146	15	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	7530	junction_4	282178.1900664337	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	1110	2474	30.0	0	True	AGTAAA	-16
PB.9609.3	chr5	+	3631	14	novel_not_in_catalog	RARS	novel	2146	15	NA	NA	1	2	intron_retention	FALSE	canonical	1	7530	junction_3	292725.11575087113	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	2156	3520	35.0	0	True	AGTAAA	-19
PB.9609.2	chr5	+	1463	12	incomplete-splice_match	RARS	ENST00000231572.7	2146	15	26	8630	1	4639	3prime_fragment	FALSE	canonical	1	707197	junction_7	124593.53918347639	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1434	29	1462	65.0	0	True	ACTAAA	-24
PB.9609.1	chr5	+	2114	15	full-splice_match	RARS	ENST00000231572.7	2146	15	34	-2	-3	2	multi-exon	FALSE	canonical	1	707197	junction_7	169101.97390520835	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	21	2003	35.0	8	True	AGTAAA	-19
PB.3827.2	chr15	-	1945	9	full-splice_match	MFAP1	ENST00000267812.3	2155	9	116	94	116	-94	multi-exon	FALSE	canonical	1	426822	junction_8	103722.11191448041	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	118	1437	40.0	3	True	AATAAA	-11
PB.818.5	chr1	+	3344	13	novel_in_catalog	SEMA4A	novel	1057	9	NA	NA	135	-2	intron_retention	FALSE	canonical	1	140529	junction_1	32733.534956418254	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	879	2591	5.0	-3255	False	ATTAAA	-20
PB.8408.6	chr3	-	5237	28	novel_not_in_catalog	TOPBP1	novel	618	2	NA	NA	-8	-79	any annotated donor/acceptor	FALSE	canonical	1	12500	junction_7	113674.58126154525	NA	2	1	TRUE	NA	NA	NA	C	coding	1183	3552	141	3692	35.0	19	True	AATAAA	-20
PB.8408.5	chr3	-	5335	28	full-splice_match	TOPBP1	ENST00000260810.9	5378	28	-36	79	-36	-79	multi-exon	FALSE	canonical	1	109338	junction_27	98055.8777385677	NA	0	NA	TRUE	NA	NA	NA	C	coding	1522	4569	169	4737	35.0	-9	True	AATAAA	-20
PB.818.6	chr1	+	4163	14	full-splice_match	SEMA4A	ENST00000368282.1	3249	14	172	-1086	172	1086	multi-exon	FALSE	canonical	1	140529	junction_1	33471.627345379085	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	37	2322	90.0	-5	True	AAAACA	-27
PB.8408.3	chr3	-	5256	28	full-splice_match	TOPBP1	ENST00000642236.1	6152	28	524	372	37	-70	multi-exon	FALSE	canonical	1	77129	junction_21	106044.77219021771	NA	2	NA	TRUE	NA	NA	NA	C	coding	1517	4554	96	4649	35.0	1	True	AATAAA	-29
PB.3827.1	chr15	-	2275	9	full-splice_match	MFAP1	ENST00000267812.3	2155	9	120	-240	120	240	multi-exon	FALSE	canonical	1	426822	junction_8	103722.11191448041	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	114	1433	20.0	7	True	CATAAA	-14
PB.8408.1	chr3	-	5773	28	full-splice_match	TOPBP1	ENST00000642236.1	6152	28	395	-16	-92	16	multi-exon	TRUE	canonical	1	77129	junction_21	106044.77219021771	NA	0	NA	TRUE	NA	NA	NA	C	coding	1517	4554	225	4778	95.0	-65	True	NA	NA
PB.818.2	chr1	+	3009	14	novel_not_in_catalog	SEMA4A	novel	1057	9	NA	NA	-67	2	any annotated donor/acceptor	FALSE	canonical	1	3250	junction_1	63226.27393107315	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	89	2260	10.0	-8105	False	ATTAAA	-16
PB.998.17	chr1	-	4948	33	incomplete-splice_match	TPR	ENST00000367478.8	9708	51	-9	24907	-9	1628	3prime_fragment	FALSE	canonical	1	379424	junction_32	116594.84203046204	NA	0	NA	TRUE	NA	NA	NA	B	coding	1547	4641	307	4947	70.0	399	False	NA	NA
PB.818.8	chr1	+	3644	12	novel_in_catalog	SEMA4A	novel	1057	9	NA	NA	177	3	intron_retention	FALSE	canonical	1	140529	junction_1	31152.540590450553	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	1782	2894	10.0	0	True	ATTAAA	-17
PB.8408.9	chr3	-	5256	28	novel_not_in_catalog	TOPBP1	novel	618	2	NA	NA	-43	-80	any annotated donor/acceptor	FALSE	canonical	1	12500	junction_7	120126.25767299387	NA	0	NA	TRUE	NA	NA	NA	C	coding	1178	3537	176	3712	40.0	-16	True	AATAAA	-19
PB.8408.8	chr3	-	7977	26	novel_in_catalog	TOPBP1	novel	618	2	NA	NA	-87	-80	intron_retention	FALSE	canonical	1	77129	junction_19	108995.60722744749	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	220	3612	40.0	-60	True	AATAAA	-19
PB.10949.1	chr7	-	2236	1	full-splice_match	LINC01006	ENST00000333319.6	2292	1	62	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-31	True	AATAAA	-36
PB.11850.39	chr9	-	1821	13	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-33	0	no_combination_of_known_junctions	FALSE	canonical	1	4880	junction_8	308172.7959462119	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	253	1815	85.0	-8	True	NA	NA
PB.11850.38	chr9	-	1925	14	incomplete-splice_match	FNBP1	ENST00000443566.6	5227	15	-32	8625	-32	0	3prime_fragment	FALSE	canonical	1	461427	junction_13	220431.6159575768	NA	4	NA	TRUE	NA	NA	NA	C	coding	555	1668	252	1919	85.0	-7	True	NA	NA
PB.6614.1	chr2	+	1301	2	full-splice_match	AC062029.1	ENST00000453008.2	1614	2	314	-1	314	1	multi-exon	FALSE	canonical	1	7856	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-38	False	NA	NA
PB.6614.2	chr2	+	3959	1	full-splice_match	AC062029.1	ENST00000606164.1	3651	1	-309	1	-309	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.11850.33	chr9	-	2220	14	incomplete-splice_match	FNBP1	ENST00000443566.6	5227	15	-26	8324	-26	-243	3prime_fragment	FALSE	canonical	1	461427	junction_13	220431.6159575768	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	246	1913	20.0	-1	True	ATTAAA	-17
PB.11850.32	chr9	-	2502	15	incomplete-splice_match	FNBP1	ENST00000420781.5	5410	16	27	8172	0	-91	3prime_fragment	FALSE	canonical	1	159769	junction_6	315648.3848669631	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	193	2043	35.0	-1	True	AATAAA	-20
PB.11850.30	chr9	-	2449	14	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	5	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	309329.29731843184	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	215	1294	25.0	-23	True	AGTAAA	-22
PB.11850.37	chr9	-	2009	15	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	17745	junction_6	337237.8844081151	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	240	2003	85.0	5	True	NA	NA
PB.11850.36	chr9	-	2060	15	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	66376	junction_6	329547.6557372598	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	234	2054	85.0	11	True	NA	NA
PB.9079.3	chr4	-	1911	6	full-splice_match	DCTD	ENST00000438320.6	1972	6	216	-155	0	4	multi-exon	FALSE	canonical	1	114241	junction_5	342860.15654280974	NA	1	1	TRUE	NA	NA	NA	C	coding	178	537	76	612	35.0	0	True	ATTAAA	-21
PB.11850.34	chr9	-	2050	15	incomplete-splice_match	FNBP1	ENST00000420781.5	5410	16	26	8625	-1	0	3prime_fragment	FALSE	canonical	1	159769	junction_6	315648.3848669631	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	194	2044	85.0	-2	True	NA	NA
PB.743.10	chr1	+	4604	14	novel_in_catalog	PIP5K1A	novel	373	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	44817	junction_8	84775.21086466213	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	423	1619	15.0	23	True	AATAAA	-19
PB.743.11	chr1	+	3346	15	full-splice_match	PIP5K1A	ENST00000349792.9	3767	15	422	-1	248	1	multi-exon	FALSE	canonical	1	22545	junction_9	87127.23484209512	NA	2	NA	TRUE	NA	NA	NA	C	coding	549	1650	25	1674	10.0	-1461	False	AATAAA	-26
PB.3706.1	chr14	+	2751	1	genic	TEX22	novel	NA	NA	NA	NA	-67	-12597	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	137	414	655	1068	50.0	-26	True	AATAAA	-16
PB.743.13	chr1	+	2614	15	full-splice_match	PIP5K1A	ENST00000409426.5	3737	15	24	1099	1	-78	multi-exon	FALSE	canonical	1	22545	junction_9	88654.70612072459	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	422	2074	70.0	24	True	NA	NA
PB.743.14	chr1	+	3003	12	incomplete-splice_match	PIP5K1A	ENST00000349792.9	3767	15	33232	8	-469	-3	5prime_fragment	FALSE	canonical	1	22545	junction_6	97363.00056281667	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	288	1340	20.0	NA	False	AATAAA	-17
PB.4391.2	chr16	+	6337	3	novel_in_catalog	ZNF646	novel	6892	3	NA	NA	-6	-514	combination_of_known_junctions	FALSE	canonical	1	10888	junction_1	14113.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1832	5499	426	5924	30.0	-9	True	AAAAAG	-34
PB.4391.3	chr16	+	6290	3	novel_in_catalog	ZNF646	novel	6892	3	NA	NA	0	-514	combination_of_known_junctions	FALSE	canonical	1	13496	junction_1	12809.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1832	5499	379	5877	30.0	-3	True	AAAAAG	-34
PB.4391.1	chr16	+	6219	3	full-splice_match	ZNF646	ENST00000300850.5	6892	3	-18	691	-18	-514	multi-exon	FALSE	canonical	1	21048	junction_1	9033.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1832	5499	308	5806	30.0	-21	True	AAAAAG	-34
PB.3293.1	chr14	-	5245	2	intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4073	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.7475.15	chr21	-	4214	8	incomplete-splice_match	APP	ENST00000358918.7	2366	17	-113	112786	7	2792	3prime_fragment	FALSE	canonical	1	2057743	junction_1	1322530.3000486514	NA	4	NA	TRUE	NA	NA	NA	C	coding	369	1110	161	1270	40.0	942	False	AATAAA	-13
PB.9728.12	chr6	-	2957	2	incomplete-splice_match	TFAP2A	ENST00000478375.5	1349	5	-95	5493	-80	-725	3prime_fragment	FALSE	canonical	1	96577	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	90	692	95.0	-10	True	NA	NA
PB.10994.2	chr8	+	2018	12	full-splice_match	VPS37A	ENST00000324849.8	4906	12	409	2479	42	268	multi-exon	FALSE	canonical	1	88813	junction_3	96305.40970087243	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	266	1459	50.0	22	True	AATAAA	-3
PB.11433.1	chr9	+	2953	1	full-splice_match	PLPP6	ENST00000381883.3	2944	1	1	-10	1	10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	295	888	61	948	30.0	-1	True	AATAAA	-30
PB.11433.2	chr9	+	3639	1	full-splice_match	PLPP6	ENST00000381883.3	2944	1	-9	-686	-9	686	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	295	888	71	958	65.0	-11	True	AATAAA	-31
PB.11433.3	chr9	+	2795	2	antisense	novelGene_SPATA6L_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1652	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	295	888	62	949	30.0	-2	True	AATAAA	-32
PB.3830.13	chr15	+	3363	12	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	8	232	no_combination_of_known_junctions	FALSE	canonical	1	927	junction_1	73605.36500590765	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	300	1358	35.0	1	True	AATAAA	-20
PB.3830.12	chr15	+	3290	13	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	7	28	combination_of_known_junctions	FALSE	canonical	1	22291	junction_1	66047.50304573511	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	89	1489	75.0	0	True	ATTAAA	-26
PB.3830.11	chr15	+	3818	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	395	2615	7	476	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	169	1569	35.0	0	True	AATAAA	-18
PB.3830.10	chr15	+	3222	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	392	3214	4	-123	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	172	1572	15.0	-3	True	AATGAA	-15
PB.3830.15	chr15	+	3464	12	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	2	233	no_combination_of_known_junctions	FALSE	canonical	1	1534	junction_11	77303.64432761614	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	154	1458	30.0	15	True	AATAAA	-21
PB.3830.14	chr15	+	5576	12	novel_not_in_catalog	CTDSPL2	novel	6828	13	NA	NA	8	231	intron_retention	FALSE	canonical	0	0	junction_6	78771.19508293236	NA	3	NA	TRUE	NA	NA	NA	C	coding	269	810	168	977	30.0	1	True	AATAAA	-19
PB.8127.14	chr3	+	2222	6	incomplete-splice_match	RBM6	ENST00000454079.5	4324	20	15	77478	4	32115	3prime_fragment	FALSE	canonical	1	37186	junction_2	162208.47498944067	NA	2	NA	TRUE	NA	NA	NA	C	coding	411	1236	806	2041	85.0	3	True	NA	NA
PB.4385.1	chr16	+	2022	2	full-splice_match	ORAI3	ENST00000318663.4	2206	2	183	1	97	-1	multi-exon	FALSE	canonical	1	259639	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	295	888	42	929	15.0	-8752	False	AATAAA	-14
PB.3283.2	chr14	-	2170	1	novel_in_catalog	DUXAP10	novel	1330	8	NA	NA	-6425	-1480	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	131	396	21	416	75.0	NA	False	NA	NA
PB.3283.1	chr14	-	3630	1	novel_in_catalog	DUXAP10	novel	1330	8	NA	NA	-7885	-1480	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	210	633	1244	1876	75.0	NA	False	NA	NA
PB.7721.14	chr22	-	3496	4	novel_in_catalog	PRR14L	novel	10826	9	NA	NA	2	2266	combination_of_known_junctions	FALSE	canonical	1	5997	junction_3	63285.14952358272	NA	0	NA	TRUE	NA	NA	NA	C	coding	1126	3378	119	3496	65.0	-7	True	NA	NA
PB.7721.15	chr22	-	2320	4	incomplete-splice_match	PRR14L	ENST00000327423.10	10826	9	2	34360	2	1020	3prime_fragment	FALSE	canonical	1	28036	junction_3	52895.8722460143	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2130	189	2318	55.0	2	True	NA	NA
PB.7721.16	chr22	-	2399	1	genic	PRR14L	novel	NA	NA	NA	NA	-5	-22203	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-14	True	ACTAAA	-16
PB.6715.3	chr2	+	3929	17	full-splice_match	EPB41L5	ENST00000331393.8	1777	17	-87	-2065	27	1349	multi-exon	FALSE	canonical	1	61956	junction_2	42242.59678315687	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	188	1705	30.0	0	True	AATAAA	-13
PB.7721.10	chr22	-	3904	3	full-splice_match	PRR14L	ENST00000461722.1	718	3	-76	-3110	-8	3110	multi-exon	FALSE	canonical	1	13854	junction_2	63236.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1245	3735	169	3903	60.0	-17	True	AATATA	-7
PB.7721.11	chr22	-	3679	4	incomplete-splice_match	PRR14L	ENST00000327423.10	10826	9	2	33001	2	2379	3prime_fragment	FALSE	canonical	1	28036	junction_3	52895.8722460143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1163	3489	189	3677	55.0	2	True	NA	NA
PB.7721.12	chr22	-	4084	4	novel_not_in_catalog	PRR14L	novel	10826	9	NA	NA	2	2266	any annotated donor/acceptor	FALSE	canonical	1	5420	junction_3	63557.14978051032	NA	0	NA	TRUE	NA	NA	NA	C	coding	1126	3378	707	4084	65.0	2	True	NA	NA
PB.7721.13	chr22	-	3568	4	incomplete-splice_match	PRR14L	ENST00000327423.10	10826	9	0	33114	0	2266	3prime_fragment	FALSE	canonical	1	28036	junction_3	52895.8722460143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1126	3378	191	3568	65.0	0	True	NA	NA
PB.7253.4	chr20	-	2636	15	full-splice_match	GGT7	ENST00000336431.9	2642	15	4	2	4	-2	multi-exon	FALSE	canonical	1	99850	junction_14	57589.68802623594	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	42	2030	25.0	-1	True	ATTAAA	-16
PB.7253.5	chr20	-	3789	14	novel_in_catalog	GGT7	novel	2642	15	NA	NA	-18	-3	intron_retention	FALSE	canonical	1	99850	junction_13	59422.19157279214	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	26	1867	25.0	15	True	ATTAAA	-15
PB.7253.6	chr20	-	2801	16	novel_not_in_catalog	GGT7	novel	2642	15	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	1	4204	junction_1	88405.41605897232	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	42	1898	25.0	-1	True	ATTAAA	-15
PB.7253.7	chr20	-	2660	15	novel_not_in_catalog	GGT7	novel	2642	15	NA	NA	-17	-3	any annotated donor/acceptor	FALSE	canonical	1	13681	junction_11	74119.07764609017	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	769	2055	25.0	16	True	ATTAAA	-15
PB.7253.1	chr20	-	3894	14	novel_not_in_catalog	GGT7	novel	2642	15	NA	NA	11	5	intron_retention	FALSE	canonical	1	15328	junction_9	78374.98261577905	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	972	1964	20.0	6	True	ATTAAA	-23
PB.5117.3	chr17	-	1903	3	novel_not_in_catalog	TOB1	novel	2229	2	NA	NA	0	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	101100.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	444	1157	50.0	-1	True	ATTAAA	-8
PB.5117.2	chr17	-	2233	2	full-splice_match	TOB1	ENST00000499247.2	2229	2	-12	8	-3	-8	multi-exon	FALSE	canonical	1	202200	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	447	1484	35.0	-4	True	ATTAAA	-11
PB.7253.8	chr20	-	2192	1	novel_in_catalog	GGT7	novel	2642	15	NA	NA	17	-7838	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	12	True	NA	NA
PB.11115.3	chr8	-	1969	2	full-splice_match	THAP1	ENST00000345117.2	1943	2	-25	-1	-5	-1	multi-exon	FALSE	canonical	1	21498	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-6	True	ATTAAA	-17
PB.11244.8	chr8	+	3108	26	novel_in_catalog	INTS8	novel	735	6	NA	NA	-7	-1	no_combination_of_known_junctions	FALSE	canonical	1	2251	junction_6	151692.561962116	NA	0	NA	TRUE	NA	NA	NA	C	coding	959	2880	150	3029	40.0	-13	True	AATAAA	-29
PB.3730.1	chr15	-	1952	1	full-splice_match	NDN	ENST00000331837.5	1931	1	-13	-8	-13	8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	321	966	127	1092	25.0	-39	False	AAAACA	-16
PB.3730.2	chr15	-	1626	1	full-splice_match	NDN	ENST00000649030.1	1627	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	321	966	89	1054	30.0	-1	True	ATTAAA	-19
PB.7219.1	chr20	-	3382	9	novel_not_in_catalog	FRG1CP	novel	769	9	NA	NA	-238	17719	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	B	coding	193	582	421	1002	25.0	NA	False	AATAAA	-17
PB.1116.12	chr1	+	3308	6	novel_in_catalog	VASH2	novel	1369	9	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	5296	junction_1	27535.81158128447	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	347	988	85.0	0	True	NA	NA
PB.11348.4	chr8	-	3044	9	full-splice_match	ST3GAL1	ENST00000521180.5	6951	9	-143	4050	-128	-30	multi-exon	FALSE	canonical	1	80173	junction_7	45998.44210252533	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	1161	2183	90.0	-19	False	NA	NA
PB.81.4	chr1	-	3452	9	novel_not_in_catalog	LZIC	novel	652	5	NA	NA	10	2545	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178252.5039417399	NA	3	NA	TRUE	NA	NA	NA	C	coding	190	573	217	789	35.0	-71	True	AATAAA	-16
PB.6857.2	chr2	-	3875	3	full-splice_match	HAGLR	ENST00000643050.1	3767	3	-36	-72	-36	-1	multi-exon	FALSE	canonical	1	12498	junction_2	16537.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	334	False	AATAAA	-24
PB.9756.14	chr6	+	4633	18	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	38	-950	any annotated donor/acceptor	FALSE	canonical	1	5964	junction_4	119669.78929728566	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	589	3813	100.0	-2045	False	NA	NA
PB.9756.15	chr6	+	4820	18	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	68662	-694	any annotated donor/acceptor	FALSE	canonical	1	216	junction_1	102150.94415046026	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	520	3744	80.0	NA	False	NA	NA
PB.9756.16	chr6	+	4556	18	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	68669	-951	any annotated donor/acceptor	FALSE	canonical	1	216	junction_1	102150.94415046026	NA	4	NA	TRUE	NA	NA	NA	C	coding	1074	3225	513	3737	95.0	NA	False	NA	NA
PB.9756.17	chr6	+	3220	13	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	68677	956	any annotated donor/acceptor	FALSE	canonical	1	216	junction_1	119746.34232859217	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	505	2985	55.0	NA	False	ATTAAA	-12
PB.9756.10	chr6	+	3711	15	incomplete-splice_match	JARID2	ENST00000341776.6	5755	18	-258	9033	-258	4595	3prime_fragment	FALSE	canonical	1	178449	junction_6	67962.1480967043	NA	3	NA	TRUE	NA	NA	NA	C	coding	1069	3207	503	3709	60.0	-33	True	NA	NA
PB.9756.11	chr6	+	4994	18	full-splice_match	JARID2	ENST00000341776.6	5755	18	-190	951	-190	-951	multi-exon	FALSE	canonical	1	178449	junction_6	74565.94936914436	NA	2	NA	TRUE	NA	NA	NA	C	coding	1246	3741	435	4175	95.0	-4832	False	NA	NA
PB.9756.12	chr6	+	4898	18	full-splice_match	JARID2	ENST00000397311.4	5595	18	-16	713	-16	-694	multi-exon	FALSE	canonical	1	19176	junction_1	99037.91228964816	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	598	3822	80.0	-2099	False	NA	NA
PB.9756.13	chr6	+	4634	18	full-splice_match	JARID2	ENST00000397311.4	5595	18	-8	969	-8	-950	multi-exon	FALSE	canonical	1	19176	junction_1	99037.91228964816	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	590	3814	100.0	-2091	False	NA	NA
PB.11115.2	chr8	-	2154	3	full-splice_match	THAP1	ENST00000254250.7	2161	3	6	1	6	-1	multi-exon	FALSE	canonical	1	190433	junction_2	4589.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	226	867	25.0	5	True	ATTAAA	-17
PB.9534.1	chr5	-	3241	6	full-splice_match	GNPDA1	ENST00000508177.5	2980	6	-259	-2	-12	-2	multi-exon	FALSE	canonical	1	427055	junction_5	76359.06862344511	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	1019	1888	35.0	3145	False	ATTAAA	-14
PB.9534.2	chr5	-	2652	8	full-splice_match	GNPDA1	ENST00000503794.5	2622	8	-29	-1	-6	1	multi-exon	FALSE	canonical	1	1869	junction_7	227587.70870894534	NA	3	NA	TRUE	NA	NA	NA	C	coding	289	870	431	1300	35.0	3196	False	ATTAAA	-13
PB.9534.3	chr5	-	2611	8	novel_in_catalog	GNPDA1	novel	980	7	NA	NA	-3	1	combination_of_known_junctions	TRUE	canonical	1	2225	junction_7	227506.7187269826	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	390	1259	35.0	3199	False	ATTAAA	-13
PB.9756.18	chr6	+	4663	18	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	69796	-950	any annotated donor/acceptor	FALSE	canonical	1	648	junction_1	102078.90068039353	NA	4	NA	TRUE	NA	NA	NA	C	coding	1074	3225	619	3843	100.0	NA	False	NA	NA
PB.9756.19	chr6	+	4514	17	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	69803	-950	any annotated donor/acceptor	FALSE	canonical	1	648	junction_1	121023.55856078122	NA	5	NA	TRUE	NA	NA	NA	C	coding	1074	3225	470	3694	100.0	NA	False	NA	NA
PB.9534.6	chr5	-	2340	8	full-splice_match	GNPDA1	ENST00000500692.6	2319	8	-24	3	-13	1	multi-exon	FALSE	canonical	1	10654	junction_7	225600.7236683284	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	119	988	35.0	3144	False	ATTAAA	-13
PB.9534.7	chr5	-	2263	7	novel_not_in_catalog	GNPDA1	novel	980	7	NA	NA	-12	1	any annotated donor/acceptor	FALSE	canonical	1	5045	junction_3	214205.44462637577	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	66	911	35.0	3145	False	ATTAAA	-13
PB.4310.17	chr16	-	4181	16	novel_in_catalog	GGA2	novel	5973	17	NA	NA	-1	433	intron_retention	FALSE	canonical	1	6274	junction_14	190330.93195220674	NA	2	NA	TRUE	NA	NA	NA	C	coding	526	1581	1168	2748	20.0	0	True	NA	NA
PB.4310.16	chr16	-	4202	16	novel_in_catalog	GGA2	novel	5973	17	NA	NA	0	433	intron_retention	FALSE	canonical	1	350013	junction_15	126679.40728282908	NA	2	NA	TRUE	NA	NA	NA	C	coding	526	1581	1189	2769	20.0	-1	True	NA	NA
PB.4310.15	chr16	-	4340	17	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	0	433	intron_retention	FALSE	canonical	1	11943	junction_11	221998.07277819864	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	1807	2907	20.0	1	True	NA	NA
PB.506.6	chr1	-	2940	13	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	1892	junction_11	17019.28420367777	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	408	1901	35.0	-32	True	ATTAAA	-15
PB.4310.13	chr16	-	3378	17	full-splice_match	GGA2	ENST00000309859.8	5973	17	-20	2615	-20	433	multi-exon	FALSE	canonical	1	350013	junction_16	124237.22461080694	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	104	1945	20.0	-21	False	NA	NA
PB.7525.2	chr21	+	1886	5	novel_in_catalog	WRB	novel	1178	5	NA	NA	-6	-53	intron_retention	FALSE	canonical	1	14711	junction_2	229476.52383345773	NA	0	NA	TRUE	NA	NA	NA	C	coding	69	210	100	309	30.0	-5	True	AAAACA	-22
PB.4310.11	chr16	-	3480	17	full-splice_match	GGA2	ENST00000309859.8	5973	17	1	2492	-1	556	multi-exon	FALSE	canonical	1	350013	junction_16	124237.22461080694	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	83	1924	15.0	0	True	CATAAA	-14
PB.4310.10	chr16	-	3603	17	novel_in_catalog	GGA2	novel	5973	17	NA	NA	0	549	intron_retention	FALSE	canonical	1	5136	junction_14	186865.36601918607	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	84	2054	30.0	-1	True	CATAAA	-7
PB.5259.10	chr17	-	2118	5	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	25	-10	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	69059.52847136665	NA	2	1	TRUE	NA	NA	NA	C	coding	252	759	42	800	50.0	-28	True	NA	NA
PB.5259.11	chr17	-	3261	7	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	34	-11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	70275.01128819231	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	33	1586	50.0	-19	True	NA	NA
PB.4310.18	chr16	-	3488	17	novel_in_catalog	GGA2	novel	5973	17	NA	NA	-5	429	intron_retention	FALSE	canonical	1	5136	junction_14	186865.36601918607	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	89	2059	15.0	-6	True	NA	NA
PB.11183.1	chr8	-	1924	1	antisense	novelGene_TERF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9704.1	chr6	-	1967	4	full-splice_match	TUBB2B	ENST00000259818.7	2020	4	31	22	31	0	multi-exon	FALSE	canonical	1	1296217	junction_2	116753.6844215205	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	162	1499	50.0	4032	False	AATAAA	-10
PB.506.2	chr1	-	3055	14	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1892	junction_12	14301.36884705126	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	354	2015	35.0	22	True	ATTAAA	-16
PB.5767.10	chr19	-	2099	15	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	13418	junction_13	200699.16536544877	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	731	1708	5.0	-14	True	AATAAA	-20
PB.5767.11	chr19	-	2043	17	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	21973	junction_16	163200.2876445913	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	144	2015	5.0	-11	True	AATAAA	-20
PB.5767.12	chr19	-	2018	14	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	11570	junction_8	202455.90629207235	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	121	963	5.0	-5	True	AATAAA	-20
PB.6781.7	chr2	-	1465	6	full-splice_match	ARL5A	ENST00000295087.12	5326	6	44	3817	-3	363	multi-exon	FALSE	canonical	1	129353	junction_4	80853.34525571592	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	269	808	90.0	-24	True	NA	NA
PB.6781.6	chr2	-	2034	6	full-splice_match	ARL5A	ENST00000295087.12	5326	6	21	3271	1	909	multi-exon	FALSE	canonical	1	129353	junction_4	80853.34525571592	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	292	831	30.0	3	True	CATAAA	-15
PB.2547.9	chr12	+	3903	22	novel_not_in_catalog	LRRK2	novel	9158	51	NA	NA	-2259	-580	any annotated donor/acceptor	FALSE	canonical	1	3549	junction_4	45891.48016215998	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	721	3369	10.0	-9675	False	AATAAA	-17
PB.6781.4	chr2	-	2587	6	full-splice_match	ARL5A	ENST00000295087.12	5326	6	24	2715	1	1465	multi-exon	FALSE	canonical	1	129353	junction_4	80853.34525571592	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	289	828	15.0	6	True	AGTAAA	-24
PB.6781.2	chr2	-	2821	6	full-splice_match	ARL5A	ENST00000428992.2	747	6	-6	-2068	-6	1947	multi-exon	FALSE	canonical	1	14397	junction_5	116612.16195646147	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	152	580	50.0	-4	True	AATAAA	-19
PB.6781.1	chr2	-	3050	6	full-splice_match	ARL5A	ENST00000295087.12	5326	6	14	2262	-6	1918	multi-exon	FALSE	canonical	1	129353	junction_4	80853.34525571592	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	299	838	65.0	-4	True	CATAAA	-19
PB.2547.3	chr12	+	8255	51	full-splice_match	LRRK2	ENST00000298910.11	9158	51	-77	980	-14	-578	multi-exon	TRUE	canonical	1	40254	junction_10	56700.11327328721	NA	0	NA	TRUE	NA	NA	NA	C	coding	2527	7584	136	7719	10.0	0	True	AATAAA	-19
PB.2547.2	chr12	+	4270	29	incomplete-splice_match	LRRK2	ENST00000298910.11	9158	51	-77	60639	-14	3666	3prime_fragment	TRUE	canonical	1	40254	junction_10	70304.16765892536	NA	0	NA	TRUE	NA	NA	NA	C	coding	1378	4134	136	4269	70.0	0	True	NA	NA
PB.2547.1	chr12	+	2980	22	incomplete-splice_match	LRRK2	ENST00000343742.6	4740	27	-16	10097	-16	-10097	3prime_fragment	FALSE	canonical	1	40254	junction_10	75420.23818091072	NA	1	NA	TRUE	NA	NA	NA	C	coding	947	2841	138	2978	60.0	-2	True	NA	NA
PB.2547.7	chr12	+	3628	20	novel_in_catalog	LRRK2	novel	9158	51	NA	NA	-2296	-578	no_combination_of_known_junctions	FALSE	canonical	1	3159	junction_3	39391.69566815052	NA	3	NA	TRUE	NA	NA	NA	C	coding	831	2496	597	3092	10.0	-9712	False	AATAAA	-19
PB.2547.6	chr12	+	3767	21	incomplete-splice_match	LRRK2	ENST00000430804.5	6400	30	14962	984	-2247	-578	5prime_fragment	FALSE	canonical	1	97302	junction_12	25347.292089836737	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3189	43	3231	10.0	-2	True	AATAAA	-19
PB.2547.5	chr12	+	3556	20	novel_in_catalog	LRRK2	novel	9158	51	NA	NA	-2241	-581	no_combination_of_known_junctions	FALSE	canonical	1	2554	junction_1	39455.04771564429	NA	11	NA	TRUE	NA	NA	NA	C	coding	921	2766	258	3023	10.0	4	True	AATAAA	-16
PB.2547.4	chr12	+	9245	51	full-splice_match	LRRK2	ENST00000298910.11	9158	51	-76	-11	-13	7	multi-exon	FALSE	canonical	1	40254	junction_10	56700.11327328721	NA	4	2	TRUE	NA	NA	NA	C	coding	2527	7584	135	7718	30.0	1	True	AATAAA	-28
PB.9485.2	chr5	-	1773	3	full-splice_match	MZB1	ENST00000503120.5	1887	3	114	0	79	0	multi-exon	FALSE	canonical	1	1155812	junction_2	9926.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	1185	1577	25.0	5376	False	AATAAA	-14
PB.11907.1	chr9	+	3601	1	genic	NALT1	novel	NA	NA	NA	NA	-65	-146	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	125	378	3176	3553	15.0	-2652	False	TATAAA	-20
PB.6874.9	chr2	+	3971	5	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	0	-1635	intron_retention	FALSE	canonical	1	20556	junction_1	27196.688180732595	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	1076	1459	20.0	3	True	ATTAAA	-14
PB.11907.3	chr9	+	2330	4	novel_not_in_catalog	NALT1	novel	738	3	NA	NA	-44	-150	intron_retention	FALSE	canonical	1	2048	junction_1	8778.891046140167	NA	0	NA	TRUE	NA	NA	NA	B	coding	125	378	1909	2286	10.0	2	True	TATAAA	-16
PB.11348.1	chr8	-	2962	1	incomplete-splice_match	ST3GAL1	ENST00000399640.3	6764	10	114131	0	18125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	132	399	1855	2253	0.0	NA	False	AATAAA	-21
PB.7052.17	chr2	-	6702	42	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	2	226	intron_retention	FALSE	canonical	1	9283	junction_36	279272.16786027106	NA	0	NA	TRUE	NA	NA	NA	C	coding	2061	6186	178	6363	15.0	-13	True	AATAAA	-16
PB.6886.2	chr2	+	4660	3	full-splice_match	DUSP19	ENST00000342619.10	1117	3	188	-3731	-12	-375	multi-exon	FALSE	canonical	1	2910	junction_2	12744.5	NA	8	NA	TRUE	NA	NA	NA	C	coding	166	501	188	688	25.0	-10	True	AATAAA	-20
PB.6886.1	chr2	+	4837	4	full-splice_match	DUSP19	ENST00000354221.4	5176	4	-24	363	-24	-363	multi-exon	TRUE	canonical	1	17162	junction_2	4597.818057392973	NA	3	NA	TRUE	NA	NA	NA	C	coding	217	654	200	853	20.0	-58	False	AATAAA	-32
PB.10977.4	chr8	-	5555	2	novel_not_in_catalog	PPP1R3B	novel	5548	2	NA	NA	-8	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	9	1	TRUE	NA	NA	NA	C	coding	284	855	171	1025	55.0	2	True	AATAAA	-8
PB.11020.3	chr8	+	2473	1	novel_in_catalog	PPP3CC	novel	1598	8	NA	NA	-36	-32148	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-6	True	NA	NA
PB.4447.4	chr16	+	3596	15	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	-1	232	combination_of_known_junctions	FALSE	canonical	1	44443	junction_1	79873.37665138414	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	769	2382	35.0	-75	False	AGTAAA	-26
PB.4447.5	chr16	+	2189	16	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	4	-18	combination_of_known_junctions	FALSE	canonical	1	5940	junction_2	118332.22476581206	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	430	2136	90.0	-70	False	NA	NA
PB.4447.6	chr16	+	3015	15	full-splice_match	RSPRY1	ENST00000394420.8	3547	15	15	517	-1	1	multi-exon	FALSE	canonical	1	63880	junction_1	75850.91030789092	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	419	2032	40.0	-59	False	AATAAA	-21
PB.4447.7	chr16	+	2510	16	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	1	5940	junction_2	120414.07761929942	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	751	2457	90.0	-25	True	NA	NA
PB.4447.1	chr16	+	2704	15	full-splice_match	RSPRY1	ENST00000537866.5	3586	15	-47	929	2	-18	multi-exon	FALSE	canonical	1	18320	junction_1	85443.32035514084	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1038	2651	90.0	-79	False	NA	NA
PB.4447.2	chr16	+	2162	13	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	2	-7749	combination_of_known_junctions	FALSE	canonical	1	44443	junction_1	81276.43152418514	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1389	773	2161	50.0	-79	False	NA	NA
PB.4447.3	chr16	+	2081	15	novel_in_catalog	RSPRY1	novel	692	4	NA	NA	-3	-18	combination_of_known_junctions	FALSE	canonical	1	4374	junction_1	88482.79115613732	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	415	2028	90.0	-77	False	NA	NA
PB.7529.12	chr21	+	1706	14	incomplete-splice_match	MX1	ENST00000398598.7	2850	17	8	10042	-3	-613	3prime_fragment	FALSE	canonical	1	265969	junction_1	275614.24077312613	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1308	398	1705	40.0	0	True	CATAAA	-29
PB.7529.13	chr21	+	3303	14	incomplete-splice_match	MX1	ENST00000398598.7	2850	17	17	8436	6	993	3prime_fragment	FALSE	canonical	1	265969	junction_1	275614.24077312613	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	389	1858	20.0	9	True	NA	NA
PB.7529.10	chr21	+	2959	18	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	2238	junction_14	369217.53555050195	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	398	1795	10.0	0	True	AATAAA	-17
PB.7529.11	chr21	+	2782	16	novel_in_catalog	MX1	novel	762	5	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	1549	junction_3	335537.8767571985	NA	4	1	TRUE	NA	NA	NA	C	coding	662	1989	341	2329	15.0	0	True	AATAAA	-15
PB.4447.8	chr16	+	3525	15	full-splice_match	RSPRY1	ENST00000394420.8	3547	15	18	4	2	-4	multi-exon	FALSE	canonical	1	63880	junction_1	75850.91030789092	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	416	2029	35.0	-24	True	AATAAA	-23
PB.4447.9	chr16	+	3242	15	full-splice_match	RSPRY1	ENST00000394420.8	3547	15	21	284	1	234	multi-exon	FALSE	canonical	1	63880	junction_1	75850.91030789092	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	413	2026	35.0	-21	True	AGTAAA	-28
PB.7529.14	chr21	+	2341	14	novel_in_catalog	MX1	novel	762	5	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	1	2251	junction_13	350937.64054538537	NA	3	NA	TRUE	NA	NA	NA	C	coding	508	1527	387	1913	20.0	-1069	False	AATAAA	-13
PB.7529.15	chr21	+	2649	15	full-splice_match	MX1	ENST00000455164.6	2810	15	159	2	-2	-2	multi-exon	FALSE	canonical	1	19935	junction_2	368760.71712590154	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	208	2196	15.0	-1065	False	AATAAA	-15
PB.7052.16	chr2	-	6738	42	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-15	227	intron_retention	FALSE	canonical	1	238440	junction_41	263488.5264631332	NA	0	NA	TRUE	NA	NA	NA	C	coding	2067	6204	195	6398	15.0	-30	True	AATAAA	-17
PB.9582.1	chr5	+	5378	9	incomplete-splice_match	GALNT10	ENST00000297107.10	5961	12	138884	3	42144	-3	5prime_fragment	FALSE	canonical	1	189103	junction_5	53092.895519904545	NA	5	NA	TRUE	NA	NA	NA	A	coding	404	1215	155	1369	15.0	NA	False	AGTAAA	-17
PB.11601.9	chr9	-	1939	2	incomplete-splice_match	ABHD17B	ENST00000333421.6	2614	4	-461	8563	-272	-8563	3prime_fragment	FALSE	canonical	1	148186	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	156	471	574	1044	80.0	-11	True	NA	NA
PB.715.8	chr1	-	3155	12	novel_in_catalog	OTUD7B	novel	8872	12	NA	NA	-46	3850	combination_of_known_junctions	FALSE	canonical	1	12297	junction_9	43676.44662820129	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	445	2739	40.0	3	True	AATAAA	-22
PB.11601.8	chr9	-	2751	4	full-splice_match	ABHD17B	ENST00000333421.6	2614	4	-449	312	-260	-312	multi-exon	FALSE	canonical	1	148186	junction_3	57098.74565074866	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	562	1428	70.0	1	True	NA	NA
PB.6795.1	chr2	+	7850	26	novel_in_catalog	TANC1	novel	7470	27	NA	NA	-52	-2	intron_retention	TRUE	canonical	1	67871	junction_1	29244.348835944358	NA	4	NA	TRUE	NA	NA	NA	C	coding	1226	3681	290	3970	30.0	-62	False	AATAAA	-13
PB.6795.2	chr2	+	7502	27	novel_not_in_catalog	TANC1	novel	7470	27	NA	NA	-52	1	any annotated donor/acceptor	TRUE	canonical	1	18993	junction_9	34529.14053986282	NA	3	NA	TRUE	NA	NA	NA	C	coding	1854	5565	290	5854	25.0	-62	False	AATAAA	-16
PB.6795.3	chr2	+	7250	26	novel_in_catalog	TANC1	novel	7470	27	NA	NA	-51	-3	no_combination_of_known_junctions	FALSE	canonical	1	8974	junction_7	36616.705917381485	NA	1	NA	TRUE	NA	NA	NA	C	coding	1773	5322	289	5610	30.0	-61	False	AATAAA	-8
PB.6795.4	chr2	+	4188	24	incomplete-splice_match	TANC1	ENST00000263635.7	7470	27	-51	6883	-51	-6879	3prime_fragment	FALSE	canonical	1	67871	junction_1	24118.505169644064	NA	0	NA	TRUE	NA	NA	NA	C	coding	1300	3900	289	4188	25.0	-61	False	NA	NA
PB.6795.5	chr2	+	7419	27	novel_not_in_catalog	TANC1	novel	7470	27	NA	NA	-51	-2	any annotated donor/acceptor	FALSE	canonical	1	3854	junction_4	36890.136149921746	NA	1	NA	TRUE	NA	NA	NA	C	coding	1755	5268	507	5774	30.0	-61	False	AATAAA	-13
PB.2226.9	chr11	-	2542	19	full-splice_match	MRE11	ENST00000323977.7	2588	19	56	-10	-5	0	multi-exon	FALSE	canonical	1	10042	junction_4	59463.6517567665	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	241	2283	40.0	15	True	AATAAA	-31
PB.2226.8	chr11	-	2722	20	full-splice_match	MRE11	ENST00000323929.7	6897	20	39	4136	5	152	multi-exon	FALSE	canonical	1	76103	junction_16	49143.327111465376	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	185	2311	20.0	3	True	AGTAAA	-30
PB.2226.7	chr11	-	2795	20	novel_in_catalog	MRE11	novel	6897	20	NA	NA	0	139	combination_of_known_junctions	FALSE	canonical	1	76103	junction_16	49311.564324312436	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	271	2397	25.0	-15	True	AGTAAA	-17
PB.2226.6	chr11	-	2788	20	full-splice_match	MRE11	ENST00000323929.7	6897	20	37	4072	3	216	multi-exon	FALSE	canonical	1	76103	junction_16	49143.327111465376	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	187	2313	40.0	1	True	ACTAAA	-15
PB.2226.5	chr11	-	2974	20	novel_in_catalog	MRE11	novel	6897	20	NA	NA	0	323	combination_of_known_junctions	FALSE	canonical	1	76103	junction_16	49311.564324312436	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	266	2392	30.0	-10	True	NA	NA
PB.2226.4	chr11	-	4022	20	full-splice_match	MRE11	ENST00000323929.7	6897	20	58	2817	-1	1471	multi-exon	FALSE	canonical	1	76103	junction_16	49143.327111465376	NA	4	NA	TRUE	NA	NA	NA	C	coding	708	2127	166	2292	65.0	-17	True	AATAAA	-13
PB.2226.3	chr11	-	5203	20	novel_in_catalog	MRE11	novel	6897	20	NA	NA	-2	-1729	combination_of_known_junctions	FALSE	canonical	1	76103	junction_16	49311.564324312436	NA	4	NA	TRUE	NA	NA	NA	C	coding	708	2127	259	2385	70.0	-3	True	CATAAA	-20
PB.2226.2	chr11	-	5701	21	novel_not_in_catalog	MRE11	novel	6897	20	NA	NA	0	4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	58261.79011444808	NA	2	NA	TRUE	NA	NA	NA	C	coding	708	2127	190	2316	40.0	-2	True	AATAAA	-31
PB.2226.1	chr11	-	6063	21	novel_not_in_catalog	MRE11	novel	6897	20	NA	NA	0	4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	58261.79011444808	NA	2	NA	TRUE	NA	NA	NA	C	coding	708	2127	190	2316	40.0	-2	True	AATAAA	-31
PB.7052.15	chr2	-	6910	43	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	-69	227	intron_retention	FALSE	canonical	0	0	junction_41	292001.0782370247	NA	1	NA	TRUE	NA	NA	NA	C	coding	2067	6204	367	6570	15.0	-1	True	AATAAA	-17
PB.11846.3	chr9	+	2256	5	full-splice_match	TOR1B	ENST00000259339.6	2769	5	17	496	13	267	multi-exon	FALSE	canonical	1	205860	junction_1	153636.31392594005	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	44	1054	40.0	-351	False	TTTAAA	-16
PB.10528.11	chr7	-	2389	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	-4	-2080	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	521595.44823650445	NA	3	NA	TRUE	NA	NA	NA	C	coding	128	387	117	503	0.0	-8	True	NA	NA
PB.715.3	chr1	-	5500	12	full-splice_match	OTUD7B	ENST00000581312.5	8872	12	-79	3451	-79	-3451	multi-exon	FALSE	canonical	1	82215	junction_11	26174.131731239864	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	375	2906	15.0	-30	True	AATAAA	-28
PB.715.2	chr1	-	5542	12	novel_in_catalog	OTUD7B	novel	8872	12	NA	NA	-87	-3283	combination_of_known_junctions	FALSE	canonical	1	12297	junction_9	43676.44662820129	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	726	2780	15.0	-38	True	AATAAA	-17
PB.1193.3	chr1	-	3106	21	novel_in_catalog	TTC13	novel	3253	23	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	18613	junction_17	49660.32919129211	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	22	2445	20.0	-5	True	AATAAA	-40
PB.6389.19	chr2	+	2719	6	novel_in_catalog	PPP1CB	novel	721	5	NA	NA	-17	-612	intron_retention	FALSE	canonical	1	69153	junction_5	590273.8113653357	NA	4	NA	TRUE	NA	NA	NA	C	coding	202	609	290	898	30.0	-18	True	AGTAAA	-14
PB.6389.18	chr2	+	3080	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	239	1574	81	-282	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	34	1017	10.0	-22	True	ATTAAA	-15
PB.9858.9	chr6	+	3560	17	novel_not_in_catalog	DDR1	novel	574	4	NA	NA	40	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	282353.21511470235	NA	3	1	TRUE	NA	NA	NA	C	coding	892	2679	25	2703	15.0	-8887	False	AATAAA	-15
PB.9535.4	chr5	+	1819	1	novel_in_catalog	NDFIP1	novel	3851	8	NA	NA	0	-23462	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	111	336	188	523	80.0	0	True	NA	NA
PB.12214.2	chrX	-	1470	5	full-splice_match	PSMD10	ENST00000217958.7	1546	5	70	6	1	-6	multi-exon	FALSE	canonical	1	324088	junction_3	201156.54774127415	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	29	709	35.0	-7	True	AATAAA	-7
PB.12214.3	chrX	-	1365	4	full-splice_match	PSMD10	ENST00000340200.5	713	4	-22	-630	0	-6	multi-exon	FALSE	canonical	1	6445	junction_3	341072.6290995642	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	23	604	35.0	-1	True	AATAAA	-7
PB.9858.5	chr6	+	2470	10	novel_not_in_catalog	DDR1	novel	574	4	NA	NA	-39	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	343584.51853462006	NA	2	NA	TRUE	NA	NA	NA	C	coding	477	1434	179	1612	15.0	-52	True	AATAAA	-16
PB.12214.1	chrX	-	1400	5	full-splice_match	PSMD10	ENST00000361815.9	768	5	-14	-618	-7	-5	multi-exon	FALSE	canonical	1	73629	junction_1	276972.85259242915	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	37	492	30.0	8	False	AATAAA	-8
PB.4852.2	chr17	-	1611	9	full-splice_match	ALDOC	ENST00000226253.8	1982	9	370	1	0	-1	multi-exon	TRUE	canonical	1	1095193	junction_8	410130.7642436853	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	107	1201	10.0	0	True	AATAAA	-18
PB.4852.3	chr17	-	2880	8	incomplete-splice_match	ALDOC	ENST00000395321.6	1722	10	39	3	-14	-3	intron_retention	FALSE	canonical	1	1584790	junction_2	257781.07635435183	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	1246	2472	5.0	-15	True	AATAAA	-16
PB.9858.1	chr6	+	3835	21	novel_not_in_catalog	DDR1	novel	574	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	6827	junction_1	338971.98502684553	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	322	3063	15.0	0	True	AATAAA	-16
PB.4852.1	chr17	-	1682	10	full-splice_match	ALDOC	ENST00000395321.6	1722	10	39	1	-14	-1	multi-exon	FALSE	canonical	1	119710	junction_9	846561.6148894434	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	178	1272	10.0	-15	True	AATAAA	-18
PB.11594.4	chr9	+	4014	22	novel_in_catalog	AL358113.1	novel	4322	24	NA	NA	138420	-336	no_combination_of_known_junctions	FALSE	canonical	1	34057	junction_19	150496.30279515617	NA	0	NA	TRUE	NA	NA	NA	B	coding	1153	3462	169	3630	70.0	-7063	False	NA	NA
PB.852.31	chr1	-	4597	33	novel_not_in_catalog	COPA	novel	5175	32	NA	NA	-4	-6	any annotated donor/acceptor	FALSE	canonical	1	93	junction_15	386658.3449630013	NA	1	NA	TRUE	NA	NA	NA	C	coding	1203	3612	108	3719	15.0	-31	True	AATAAA	-15
PB.11594.6	chr9	+	4095	23	full-splice_match	TJP2	ENST00000377245.9	4503	23	-42	450	-42	212	multi-exon	FALSE	canonical	1	119621	junction_1	125514.81588701325	NA	1	NA	TRUE	NA	NA	NA	C	coding	1190	3573	139	3711	70.0	-47	True	NA	NA
PB.11594.7	chr9	+	5416	20	full-splice_match	TJP2	ENST00000649114.1	5344	20	-57	-15	-52	1	multi-exon	FALSE	canonical	1	31722	junction_19	150170.59177699787	NA	5	NA	TRUE	NA	NA	NA	C	coding	989	2970	149	3118	15.0	-57	True	AATAAA	-22
PB.11594.1	chr9	+	4848	24	novel_in_catalog	AL358113.1	novel	4322	24	NA	NA	85555	15	intron_retention	TRUE	canonical	1	42692	junction_1	145394.80765889253	NA	0	NA	TRUE	NA	NA	NA	B	coding	1167	3504	517	4020	15.0	0	True	AATAAA	-22
PB.11594.2	chr9	+	4056	21	full-splice_match	TJP2	ENST00000348208.9	4055	21	0	-1	0	1	multi-exon	FALSE	canonical	1	31722	junction_19	149328.06619570046	NA	0	NA	TRUE	NA	NA	NA	C	coding	1043	3132	97	3228	15.0	-5	True	AATAAA	-22
PB.11594.3	chr9	+	3720	19	full-splice_match	TJP2	ENST00000636247.1	3725	19	-15	20	2	-20	multi-exon	FALSE	canonical	1	119621	junction_1	129713.18608571055	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2982	95	3076	100.0	-3	True	AGTAAA	-31
PB.3607.3	chr14	+	2078	13	full-splice_match	TTC8	ENST00000346301.8	2058	13	-10	-10	-5	3	multi-exon	FALSE	canonical	1	47710	junction_4	59682.826515580586	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	63	1490	25.0	-5	True	AATAAA	-29
PB.3607.2	chr14	+	2095	13	novel_in_catalog	TTC8	novel	1020	9	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	1	19006	junction_12	69212.1149777082	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	82	1515	30.0	-24	True	AATAAA	-21
PB.3607.1	chr14	+	2197	14	full-splice_match	TTC8	ENST00000622513.4	5270	14	-16	3089	14	1	multi-exon	FALSE	canonical	1	89148	junction_5	57166.06129597066	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	101	1618	25.0	2	True	AATAAA	-20
PB.12377.1	chrY	-	2830	1	novel_in_catalog	DHRSX	novel	2571	7	NA	NA	110862	-49067	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	119	360	225	584	95.0	NA	False	NA	NA
PB.11594.8	chr9	+	4983	18	novel_not_in_catalog	AL358113.1	novel	4322	24	NA	NA	138442	41	intron_retention	FALSE	non_canonical	0	0	junction_1	148706.9192175784	NA	1	NA	TRUE	NA	NA	NA	B	coding	874	2625	206	2830	100.0	-55	True	AGTAAA	-31
PB.852.33	chr1	-	4318	33	full-splice_match	COPA	ENST00000241704.7	4789	33	135	336	-6	6	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	0	NA	TRUE	NA	NA	NA	C	coding	1224	3675	96	3770	90.0	-19	True	NA	NA
PB.8868.2	chr4	-	4509	9	full-splice_match	KLHL8	ENST00000425278.6	4049	9	10	-470	10	-324	multi-exon	FALSE	canonical	1	8842	junction_7	47392.75398729219	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	250	1563	30.0	20	True	AATAAA	-16
PB.6830.4	chr2	+	5228	12	novel_in_catalog	DCAF17	novel	2429	13	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	1	15641	junction_6	31417.942251822333	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	732	1292	25.0	-23	True	NA	NA
PB.3786.3	chr15	+	2411	10	incomplete-splice_match	SPINT1	ENST00000344051.8	3056	11	394	554	235	-2	5prime_fragment	FALSE	canonical	1	249322	junction_4	163553.3085490273	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	162	1733	5.0	-65	True	AATAAA	-12
PB.3786.2	chr15	+	2431	11	full-splice_match	SPINT1	ENST00000562057.5	2456	11	26	-1	-23	1	multi-exon	FALSE	canonical	1	139179	junction_1	198852.71013079002	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	209	1750	0.0	-4	True	AATAAA	-15
PB.3786.1	chr15	+	2478	11	full-splice_match	SPINT1	ENST00000344051.8	3056	11	25	553	-24	-1	multi-exon	TRUE	canonical	1	139179	junction_1	214203.3950504987	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	210	1799	5.0	-5	True	AATAAA	-13
PB.9535.2	chr5	+	2329	8	full-splice_match	NDFIP1	ENST00000253814.5	3851	8	276	1246	-7	-998	multi-exon	FALSE	canonical	1	831359	junction_1	319562.856889322	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	195	860	20.0	-7	True	NA	NA
PB.4039.2	chr15	+	1538	4	full-splice_match	RAMAC	ENST00000304191.3	1568	4	3	27	3	-27	multi-exon	FALSE	canonical	1	214	junction_3	33871.38981828502	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	219	575	45.0	-4	True	AATAAA	-7
PB.4039.1	chr15	+	1184	4	full-splice_match	RAMAC	ENST00000304191.3	1568	4	-1	385	-1	-385	multi-exon	FALSE	canonical	1	214	junction_3	33871.38981828502	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	223	579	20.0	-8	True	AATAAA	-19
PB.3786.4	chr15	+	2343	10	incomplete-splice_match	SPINT1	ENST00000562057.5	2456	11	415	1	-242	-1	5prime_fragment	FALSE	canonical	1	361602	junction_4	135870.06050916968	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	141	1664	5.0	-44	True	AATAAA	-13
PB.1937.8	chr11	-	5000	16	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-54	-1	intron_retention	FALSE	canonical	1	225152	junction_15	97552.13798474922	NA	2	NA	TRUE	NA	NA	NA	C	coding	623	1872	68	1939	10.0	104	False	AATAAA	-19
PB.1937.3	chr11	-	4213	19	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-32	6	combination_of_known_junctions	FALSE	canonical	1	64034	junction_6	164580.40975796228	NA	3	NA	TRUE	NA	NA	NA	C	coding	614	1845	46	1890	15.0	-20	True	AATAAA	-26
PB.1937.2	chr11	-	4133	18	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-59	-1	combination_of_known_junctions	FALSE	canonical	1	102184	junction_7	136836.3466257751	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	73	1917	10.0	99	False	AATAAA	-19
PB.1937.1	chr11	-	4680	17	novel_not_in_catalog	FNBP4	novel	3972	17	NA	NA	-53	-9	intron_retention	FALSE	canonical	1	59860	junction_16	144728.73090715642	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	67	1917	20.0	105	False	AATAAA	-11
PB.8868.6	chr4	-	4059	9	full-splice_match	KLHL8	ENST00000425278.6	4049	9	-29	19	-9	-19	multi-exon	FALSE	canonical	1	8842	junction_7	47392.75398729219	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	289	1602	100.0	-19	True	NA	NA
PB.1937.7	chr11	-	4990	16	novel_not_in_catalog	FNBP4	novel	3972	17	NA	NA	-38	-1	intron_retention	FALSE	canonical	1	59860	junction_15	125903.50166423313	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	52	1929	10.0	-26	True	AATAAA	-19
PB.1937.4	chr11	-	4395	17	novel_in_catalog	FNBP4	novel	3972	17	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	139163	junction_6	118600.94672313961	NA	2	NA	TRUE	NA	NA	NA	C	coding	623	1872	19	1890	10.0	7	True	AATAAA	-18
PB.9593.1	chr5	+	2352	6	full-splice_match	THG1L	ENST00000231198.11	3107	6	209	546	-14	-546	multi-exon	FALSE	canonical	1	222832	junction_3	24831.853314644075	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	123	932	90.0	-19	True	NA	NA
PB.9593.2	chr5	+	2639	6	full-splice_match	THG1L	ENST00000231198.11	3107	6	223	245	0	-245	multi-exon	FALSE	canonical	1	222832	junction_3	24831.853314644075	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	109	918	75.0	-5	True	NA	NA
PB.8868.8	chr4	-	3487	10	full-splice_match	KLHL8	ENST00000498875.6	5175	10	-2	1690	-2	505	multi-exon	FALSE	canonical	1	1298	junction_8	49368.43386988726	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	273	1907	80.0	-3	True	AAAAAG	-45
PB.8739.5	chr4	-	1830	7	novel_in_catalog	TMEM156	novel	1935	7	NA	NA	30	-78	no_combination_of_known_junctions	FALSE	canonical	1	3870	junction_5	29339.728706236452	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	592	972	100.0	13	True	NA	NA
PB.3218.30	chr13	-	5739	9	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	-497	any annotated donor/acceptor	FALSE	canonical	1	1587	junction_2	106740.30990416648	NA	6	NA	TRUE	NA	NA	NA	C	coding	429	1290	428	1717	15.0	-1	True	AATAAA	-17
PB.3218.33	chr13	-	4736	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	-40	-498	no_combination_of_known_junctions	FALSE	canonical	1	899	junction_3	114360.48801643873	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	468	1709	15.0	1410	False	AATAAA	-16
PB.3218.32	chr13	-	4668	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	4	-534	no_combination_of_known_junctions	FALSE	canonical	1	3411	junction_4	116174.86256480194	NA	3	NA	TRUE	NA	NA	NA	C	coding	562	1689	424	2112	75.0	3	True	NA	NA
PB.3218.35	chr13	-	6703	8	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-498	intron_retention	FALSE	canonical	1	18181	junction_2	88161.14805263815	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	428	1717	15.0	-1	True	AATAAA	-16
PB.3218.34	chr13	-	4515	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	-498	any annotated donor/acceptor	FALSE	canonical	1	294	junction_2	93669.58240647858	NA	3	NA	TRUE	NA	NA	NA	C	coding	417	1254	428	1681	15.0	-1	True	AATAAA	-16
PB.3218.37	chr13	-	5182	3	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	17780	-498	intron_retention	FALSE	canonical	1	331	junction_2	132637.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	134	405	2186	2590	15.0	NA	False	AATAAA	-16
PB.3218.36	chr13	-	3548	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	-498	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	90831.2915691638	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	428	1813	15.0	-1	True	AATAAA	-16
PB.3218.39	chr13	-	4324	8	full-splice_match	DCT	ENST00000377028.9	5064	8	107	633	107	-633	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	308	1867	35.0	1570	False	ATTAAA	-16
PB.10476.7	chr7	+	3300	9	novel_in_catalog	FKBP9	novel	3621	11	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	5230	junction_3	287394.6115421051	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	426	1724	20.0	-23	True	AATAAA	-43
PB.422.2	chr1	-	1867	12	novel_in_catalog	YIPF1	novel	1602	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	124105	junction_10	78985.46329484196	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	351	1271	10.0	3	True	AATAAA	-12
PB.422.3	chr1	-	1655	11	full-splice_match	YIPF1	ENST00000464950.6	1602	11	-68	15	-3	-1	multi-exon	FALSE	canonical	1	162312	junction_10	69280.56456351954	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	139	1059	10.0	-5	True	AATAAA	-12
PB.422.1	chr1	-	1839	11	full-splice_match	YIPF1	ENST00000072644.6	1858	11	32	-13	-4	-1	multi-exon	FALSE	canonical	1	109839	junction_1	88228.01731315286	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	360	1280	20.0	-6	True	AATAAA	-26
PB.8626.9	chr3	+	2255	6	full-splice_match	PIGX	ENST00000392391.7	3057	6	89	713	36	-713	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	210	863	100.0	36	False	NA	NA
PB.8626.8	chr3	+	2060	6	full-splice_match	PIGX	ENST00000392391.7	3057	6	-13	1010	-13	708	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	312	965	50.0	-32	True	AATAAA	-21
PB.422.4	chr1	-	1605	10	novel_in_catalog	YIPF1	novel	1602	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	109839	junction_1	79413.2014103884	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	140	1060	10.0	-6	True	AATAAA	-12
PB.422.5	chr1	-	1703	11	novel_in_catalog	YIPF1	novel	1602	11	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	23281	junction_8	105825.71848983593	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	366	1109	10.0	1	True	AATAAA	-10
PB.8626.5	chr3	+	2083	7	novel_in_catalog	PIGX	novel	744	6	NA	NA	-23	604	combination_of_known_junctions	FALSE	canonical	1	31144	junction_3	89483.50021605473	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	640	1092	50.0	-42	True	AATAAA	-11
PB.8626.4	chr3	+	1782	6	full-splice_match	PIGX	ENST00000639474.1	777	6	-199	-806	-24	419	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	7	NA	TRUE	NA	NA	NA	C	coding	217	654	323	976	50.0	-43	True	ATTAAA	-32
PB.8626.7	chr3	+	1901	5	novel_in_catalog	PIGX	novel	744	6	NA	NA	-22	604	no_combination_of_known_junctions	FALSE	canonical	1	3135	junction_1	110661.65942412033	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	458	910	50.0	-41	True	AATAAA	-11
PB.8626.6	chr3	+	2484	7	novel_in_catalog	PIGX	novel	744	6	NA	NA	-22	-712	combination_of_known_junctions	FALSE	canonical	1	31144	junction_3	89483.50021605473	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	639	1091	100.0	-41	True	NA	NA
PB.8626.1	chr3	+	3251	7	novel_in_catalog	PIGX	novel	744	6	NA	NA	-55	-7	combination_of_known_junctions	FALSE	canonical	1	5222	junction_2	113567.33576128598	NA	2	NA	TRUE	NA	NA	NA	C	coding	150	453	701	1153	50.0	-74	True	AATAAA	-11
PB.9480.10	chr5	-	2701	17	full-splice_match	HSPA9	ENST00000297185.8	2825	17	122	2	61	-2	multi-exon	FALSE	canonical	1	478276	junction_10	650464.7146484965	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	169	2001	10.0	395	False	AATAAA	-16
PB.8626.3	chr3	+	2204	6	full-splice_match	PIGX	ENST00000392391.7	3057	6	-24	877	-24	841	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	323	976	70.0	-43	True	NA	NA
PB.7983.5	chr3	+	2704	1	novel_in_catalog	OXSM	novel	1519	3	NA	NA	-4	948	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	326	981	936	1916	80.0	-8	True	TTTAAA	-6
PB.10332.1	chr6	+	3660	12	full-splice_match	FGFR1OP	ENST00000349556.4	1484	12	-78	-2098	13	-3	multi-exon	FALSE	canonical	1	135667	junction_3	56685.61735725874	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	84	1223	15.0	-299	False	AATAAA	-22
PB.11627.11	chr9	-	3947	24	novel_in_catalog	AGTPBP1	novel	4208	26	NA	NA	-56	-273	combination_of_known_junctions	FALSE	canonical	1	8557	junction_17	86493.45446299043	NA	4	NA	TRUE	NA	NA	NA	C	coding	961	2886	897	3782	25.0	-19	True	AATAAA	-19
PB.10332.3	chr6	+	1577	12	full-splice_match	FGFR1OP	ENST00000349556.4	1484	12	-92	-1	-1	1	multi-exon	FALSE	canonical	1	135667	junction_3	56685.61735725874	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	98	1237	0.0	-4	True	AATAAA	-19
PB.10332.2	chr6	+	1634	13	full-splice_match	FGFR1OP	ENST00000366847.8	14166	13	134	12398	-1	-2	multi-exon	FALSE	canonical	1	81882	junction_7	70249.04330230333	NA	2	NA	TRUE	NA	NA	NA	C	coding	399	1200	98	1297	10.0	-4	True	AATAAA	-16
PB.10332.5	chr6	+	3707	13	full-splice_match	FGFR1OP	ENST00000366847.8	14166	13	163	10296	28	-1	multi-exon	FALSE	canonical	1	81882	junction_7	70249.04330230333	NA	4	1	TRUE	NA	NA	NA	C	coding	399	1200	69	1268	15.0	8	True	AATAAA	-24
PB.10332.4	chr6	+	1813	12	full-splice_match	FGFR1OP	ENST00000349556.4	1484	12	-69	-260	22	260	multi-exon	FALSE	canonical	1	135667	junction_3	56685.61735725874	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	75	1214	15.0	2	True	ATTAAA	-18
PB.10332.7	chr6	+	1841	13	full-splice_match	FGFR1OP	ENST00000366847.8	14166	13	193	12132	-33	264	multi-exon	FALSE	canonical	1	81882	junction_7	70249.04330230333	NA	16	2	TRUE	NA	NA	NA	C	coding	399	1200	39	1238	25.0	-22	True	ATTAAA	-22
PB.10332.6	chr6	+	4146	12	novel_not_in_catalog	FGFR1OP	novel	14166	13	NA	NA	33	-2	intron_retention	FALSE	canonical	1	12353	junction_9	81337.1820828184	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	64	999	10.0	-47	True	AATAAA	-16
PB.10332.8	chr6	+	3402	14	novel_not_in_catalog	FGFR1OP	novel	14166	13	NA	NA	-26	-1	any annotated donor/acceptor	FALSE	canonical	1	7302	junction_13	94923.53791634725	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	32	1228	15.0	-15	True	AATAAA	-24
PB.11627.13	chr9	-	3941	25	incomplete-splice_match	AGTPBP1	ENST00000357081.7	4393	26	-79	28559	64	-21228	3prime_fragment	FALSE	canonical	1	93391	junction_24	64876.065950124714	NA	0	NA	TRUE	NA	NA	NA	C	coding	1168	3507	225	3731	10.0	-40	True	AATAAA	-18
PB.6973.16	chr2	+	3832	4	incomplete-splice_match	CREB1	ENST00000432329.6	7650	9	72	38921	24	-3046	3prime_fragment	FALSE	canonical	1	126223	junction_3	155077.60251779322	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	186	500	80.0	2	True	NA	NA
PB.10093.1	chr6	+	2649	6	novel_in_catalog	ZNF292	novel	1096	4	NA	NA	-590	512	combination_of_known_junctions	FALSE	canonical	1	8700	junction_1	70593.72041874546	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	433	1035	90.0	-610	False	NA	NA
PB.5436.12	chr18	+	5535	16	novel_not_in_catalog	DSG2	novel	5831	15	NA	NA	-1	-158	any annotated donor/acceptor	FALSE	canonical	1	4503	junction_1	148518.0033445403	NA	1	NA	TRUE	NA	NA	NA	C	coding	940	2823	606	3428	20.0	41	True	AATAAA	-17
PB.5436.11	chr18	+	2564	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	172	3095	-5	-3095	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	2	NA	TRUE	NA	NA	NA	C	coding	842	2526	38	2563	70.0	37	True	NA	NA
PB.5436.10	chr18	+	5512	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	161	158	-16	-158	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	1	NA	TRUE	NA	NA	NA	C	coding	1118	3357	49	3405	20.0	26	True	AATAAA	-17
PB.10093.5	chr6	+	6946	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	19	3645	3	-94	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	1	NA	TRUE	NA	NA	NA	C	coding	2307	6921	25	6945	65.0	-1	True	NA	NA
PB.10093.4	chr6	+	7447	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	16	3147	0	404	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	1	NA	TRUE	NA	NA	NA	C	coding	2473	7419	28	7446	75.0	-4	True	NA	NA
PB.6864.9	chr2	+	3939	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	123	3702	-1	1716	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	3	NA	TRUE	NA	NA	NA	C	coding	658	1977	24	2000	40.0	-6	True	AATAAA	-8
PB.5436.14	chr18	+	3463	8	incomplete-splice_match	DSG2	ENST00000261590.12	5831	15	26659	1332	26482	-1332	5prime_fragment	FALSE	canonical	1	289025	junction_2	56901.62500495115	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	11	2530	85.0	NA	False	NA	NA
PB.10093.9	chr6	+	7630	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	19	2961	3	590	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	0	NA	TRUE	NA	NA	NA	C	coding	2535	7605	25	7629	60.0	-1	True	AAAAAG	-28
PB.10093.8	chr6	+	6426	9	novel_not_in_catalog	ZNF292	novel	1096	4	NA	NA	3	-762	any annotated donor/acceptor	FALSE	canonical	1	613	junction_3	53545.55739026698	NA	6	1	TRUE	NA	NA	NA	C	coding	1944	5832	593	6424	65.0	-1	True	NA	NA
PB.1822.12	chr11	+	4798	29	novel_not_in_catalog	USP47	novel	7775	27	NA	NA	-9	148	any annotated donor/acceptor	FALSE	canonical	1	3359	junction_2	131551.10694274286	NA	0	NA	TRUE	NA	NA	NA	C	coding	1275	3828	577	4404	35.0	-9	True	AATAAA	-16
PB.6864.4	chr2	+	2117	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	103	5544	-21	-126	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	44	2020	10.0	-26	True	AATATA	-20
PB.6864.3	chr2	+	5885	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	96	1783	-28	-1783	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	4	NA	TRUE	NA	NA	NA	C	coding	658	1977	51	2027	30.0	-33	True	AATAAA	-31
PB.6864.2	chr2	+	3673	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	43	4048	43	1370	multi-exon	TRUE	canonical	1	264071	junction_1	67760.20640587073	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	26	2080	50.0	-2912	False	AATAAA	-37
PB.6864.1	chr2	+	3240	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	123	4401	-1	1017	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	24	2000	25.0	-6	True	ATTAAA	-18
PB.8760.15	chr4	-	3396	27	novel_in_catalog	ATP8A1	novel	5918	14	NA	NA	2141	772	combination_of_known_junctions	FALSE	canonical	1	3738	junction_12	54160.07852740499	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	43	1536	20.0	NA	False	ACTAAA	-27
PB.8220.12	chr3	-	2055	7	incomplete-splice_match	TMF1	ENST00000488010.5	3399	16	16	15893	16	4822	3prime_fragment	FALSE	canonical	1	257124	junction_6	40719.596254615404	NA	2	NA	TRUE	NA	NA	NA	C	coding	622	1866	189	2054	70.0	-1	True	NA	NA
PB.9320.9	chr5	+	5336	18	full-splice_match	ZFYVE16	ENST00000338008.9	6773	18	30	1407	-12	632	multi-exon	FALSE	canonical	1	77269	junction_1	51472.284830323784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	151	4770	10.0	-536	False	GATAAA	-22
PB.9320.8	chr5	+	5701	18	novel_not_in_catalog	ZFYVE16	novel	6773	18	NA	NA	8	-813	any annotated donor/acceptor	FALSE	canonical	1	1254	junction_13	68908.74990362454	NA	2	NA	TRUE	NA	NA	NA	C	coding	1537	4614	160	4773	30.0	-3	True	AATAAA	-35
PB.1193.2	chr1	-	3262	23	full-splice_match	TTC13	ENST00000366661.8	3253	23	-10	1	-10	-1	multi-exon	FALSE	canonical	1	59704	junction_15	44631.5789667598	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	19	2601	20.0	-2	True	AATAAA	-40
PB.5977.23	chr19	+	2080	11	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	17	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	717421.2559978691	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	316	1422	90.0	0	True	NA	NA
PB.9320.5	chr5	+	6323	18	full-splice_match	ZFYVE16	ENST00000338008.9	6773	18	4	446	4	-214	multi-exon	FALSE	canonical	1	77269	junction_1	51472.284830323784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	177	4796	40.0	0	True	AATAAA	-17
PB.9320.4	chr5	+	6787	18	full-splice_match	ZFYVE16	ENST00000338008.9	6773	18	-3	-11	-3	11	multi-exon	FALSE	canonical	1	77269	junction_1	51472.284830323784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	184	4803	25.0	-7	True	AGTAAA	-31
PB.9320.7	chr5	+	1973	3	incomplete-splice_match	ZFYVE16	ENST00000510995.1	2873	4	-63	1891	-4	1326	3prime_fragment	FALSE	canonical	1	77269	junction_1	40461.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1800	174	1973	75.0	3	True	AATATA	-19
PB.9320.6	chr5	+	5450	19	full-splice_match	ZFYVE16	ENST00000505560.4	6599	19	42	1107	-8	717	multi-exon	FALSE	canonical	1	31566	junction_1	67991.83138354849	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	180	4799	30.0	4	True	ATTAAA	-9
PB.9320.1	chr5	+	6456	18	novel_not_in_catalog	ZFYVE16	novel	6773	18	NA	NA	-403	-216	any annotated donor/acceptor	FALSE	canonical	1	5744	junction_1	62839.85563456532	NA	9	NA	TRUE	NA	NA	NA	C	coding	1539	4620	312	4931	35.0	0	True	AATAAA	-15
PB.9320.3	chr5	+	6573	18	full-splice_match	ZFYVE16	ENST00000338008.9	6773	18	-10	210	-10	0	multi-exon	FALSE	canonical	1	77269	junction_1	51472.284830323784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	191	4810	30.0	-576	False	AATAAA	-44
PB.9320.2	chr5	+	4995	18	novel_not_in_catalog	ZFYVE16	novel	6773	18	NA	NA	-316	217	any annotated donor/acceptor	FALSE	canonical	1	5744	junction_1	62839.85563456532	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	225	4844	45.0	-882	False	NA	NA
PB.8770.3	chr4	-	10564	63	novel_in_catalog	FRYL	novel	11103	61	NA	NA	9	71	combination_of_known_junctions	FALSE	canonical	1	27110	junction_22	47958.527086157184	NA	0	NA	TRUE	NA	NA	NA	B	coding	3006	9021	597	9617	40.0	-20	True	AATAAA	-30
PB.1822.13	chr11	+	7435	28	full-splice_match	USP47	ENST00000527733.5	4525	28	-8	-2902	-8	0	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	220	4287	30.0	-8	True	AATAAA	-14
PB.5438.15	chr18	-	5338	28	novel_in_catalog	TRAPPC8	novel	6226	29	NA	NA	9	-4	intron_retention	FALSE	canonical	1	5075	junction_2	69756.11915246303	NA	1	NA	TRUE	NA	NA	NA	C	coding	1293	3882	364	4245	25.0	0	True	AATAAA	-17
PB.5438.14	chr18	-	5355	30	novel_in_catalog	TRAPPC8	novel	6226	29	NA	NA	-83	-4	combination_of_known_junctions	FALSE	canonical	1	425	junction_29	70063.83734950528	NA	0	NA	TRUE	NA	NA	NA	C	coding	1435	4308	235	4542	25.0	18	False	AATAAA	-17
PB.5438.16	chr18	-	5343	28	novel_not_in_catalog	TRAPPC8	novel	6226	29	NA	NA	9	-4	intron_retention	FALSE	canonical	1	53	junction_25	83216.29898413701	NA	13	1	TRUE	NA	NA	NA	C	coding	1388	4167	364	4530	25.0	0	True	AATAAA	-17
PB.5438.13	chr18	-	5579	29	full-splice_match	TRAPPC8	ENST00000283351.8	6226	29	-122	769	-86	-4	multi-exon	FALSE	canonical	1	124596	junction_28	56492.68667206908	NA	0	NA	TRUE	NA	NA	NA	C	coding	1435	4308	459	4766	25.0	15	False	AATAAA	-17
PB.5438.12	chr18	-	5641	30	novel_not_in_catalog	TRAPPC8	novel	6226	29	NA	NA	-30	-4	intron_retention	FALSE	canonical	1	1370	junction_29	79084.34829248206	NA	1	NA	TRUE	NA	NA	NA	C	coding	1410	4233	596	4828	25.0	-4	True	AATAAA	-17
PB.11137.1	chr8	+	1648	7	incomplete-splice_match	TGS1	ENST00000260129.5	3782	13	288	29377	-40	-2929	3prime_fragment	FALSE	canonical	1	205236	junction_6	36095.51485872818	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1458	190	1647	75.0	-40	True	NA	NA
PB.5977.25	chr19	+	3133	19	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	19	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	952941.1718044444	NA	3	NA	TRUE	NA	NA	NA	C	coding	805	2418	58	2475	90.0	2	True	NA	NA
PB.5438.18	chr18	-	5296	29	novel_not_in_catalog	TRAPPC8	novel	6226	29	NA	NA	-37	-4	any annotated donor/acceptor	FALSE	canonical	1	3325	junction_28	77534.5567829225	NA	11	1	TRUE	NA	NA	NA	C	coding	1405	4218	266	4483	25.0	64	False	AATAAA	-17
PB.3798.4	chr15	-	2497	14	incomplete-splice_match	RPAP1	ENST00000561603.5	3906	24	0	9257	0	1555	3prime_fragment	FALSE	canonical	1	135258	junction_13	20600.46631344448	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	116	2107	85.0	-1	True	NA	NA
PB.9200.5	chr5	+	4854	6	full-splice_match	C5orf51	ENST00000381647.6	5241	6	-5	392	-5	-392	multi-exon	FALSE	canonical	1	138482	junction_1	27102.21679789312	NA	2	NA	TRUE	NA	NA	NA	C	coding	294	885	25	909	40.0	0	True	ATTAAA	-15
PB.3798.2	chr15	-	4615	26	novel_not_in_catalog	RPAP1	novel	1712	4	NA	NA	1	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	43852.87992192075	NA	1	NA	TRUE	NA	NA	NA	C	coding	1149	3450	124	3573	30.0	-9	True	AATAAA	-18
PB.3798.1	chr15	-	4673	25	full-splice_match	RPAP1	ENST00000304330.8	4665	25	-11	3	-1	0	multi-exon	FALSE	canonical	1	135258	junction_24	28059.026552389667	NA	0	NA	TRUE	NA	NA	NA	C	coding	1393	4182	129	4310	30.0	-14	True	AATAAA	-18
PB.9200.2	chr5	+	5302	6	full-splice_match	C5orf51	ENST00000381647.6	5241	6	-5	-56	-5	56	multi-exon	FALSE	canonical	1	138482	junction_1	27102.21679789312	NA	3	NA	TRUE	NA	NA	NA	C	coding	294	885	25	909	25.0	0	True	ATTAAA	-15
PB.4598.21	chr16	-	4207	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-17	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	797250.6059438289	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	84	1262	10.0	-1	True	AAGAAA	-14
PB.5062.4	chr17	+	2124	15	incomplete-splice_match	NSF	ENST00000398238.8	3983	21	66	43156	-20	-37275	3prime_fragment	FALSE	canonical	1	710	junction_4	194016.13166393337	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	42	1901	25.0	NA	False	AATAAA	-20
PB.5062.5	chr17	+	3958	22	novel_not_in_catalog	NSF	novel	3983	21	NA	NA	-15	-4	any annotated donor/acceptor	FALSE	canonical	1	17	junction_10	287891.95666531747	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	1104	2321	35.0	NA	False	AATAAA	-16
PB.5062.6	chr17	+	3868	20	novel_in_catalog	NSF	novel	3983	21	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	1	10	junction_3	289399.14668741106	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	279	2231	35.0	NA	False	AATAAA	-16
PB.5062.7	chr17	+	2546	22	novel_not_in_catalog	NSF	novel	3983	21	NA	NA	-7	-4	any annotated donor/acceptor	FALSE	canonical	1	710	junction_4	287707.0388642679	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	29	2263	35.0	NA	False	AATAAA	-16
PB.5062.1	chr17	+	3916	21	full-splice_match	NSF	ENST00000398238.8	3983	21	63	4	-23	-4	multi-exon	FALSE	canonical	1	710	junction_4	288831.79273514886	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	45	2279	35.0	NA	False	AATAAA	-16
PB.5062.2	chr17	+	4012	22	novel_in_catalog	NSF	novel	3983	21	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	1	710	junction_4	276685.32907973946	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	42	2351	35.0	NA	False	AATAAA	-16
PB.5062.3	chr17	+	2446	21	full-splice_match	NSF	ENST00000398238.8	3983	21	66	1471	-20	-66	multi-exon	FALSE	canonical	1	710	junction_4	288831.79273514886	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	42	2276	20.0	NA	False	AATAAA	-22
PB.2729.33	chr12	-	1988	14	full-splice_match	GNS	ENST00000258145.7	5122	14	42	3092	1	-66	multi-exon	FALSE	canonical	1	420699	junction_13	133720.442984122	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	130	1788	5.0	0	True	NA	NA
PB.2729.32	chr12	-	2153	14	full-splice_match	GNS	ENST00000258145.7	5122	14	12	2957	-4	56	multi-exon	FALSE	canonical	1	420699	junction_13	133720.442984122	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	160	1818	35.0	-30	True	NA	NA
PB.9749.4	chr6	+	2348	10	full-splice_match	SIRT5	ENST00000379262.8	2339	10	-12	3	-5	-3	multi-exon	FALSE	canonical	1	5217	junction_9	68028.73772454595	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	231	1130	25.0	-12	True	GATAAA	-40
PB.9749.5	chr6	+	1640	10	novel_not_in_catalog	SIRT5	novel	4382	9	NA	NA	-3	-4104	any annotated donor/acceptor	FALSE	canonical	1	5018	junction_9	68069.93779185973	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	229	1125	25.0	-10	True	AATAAA	-17
PB.9749.2	chr6	+	1482	10	novel_in_catalog	SIRT5	novel	4382	9	NA	NA	-14	-2393	combination_of_known_junctions	FALSE	canonical	1	24663	junction_1	51731.789472238444	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	250	1182	55.0	-57	False	NA	NA
PB.9749.3	chr6	+	3089	10	novel_in_catalog	SIRT5	novel	4382	9	NA	NA	1	-771	combination_of_known_junctions	FALSE	canonical	1	24663	junction_1	51731.789472238444	NA	2	NA	TRUE	NA	NA	NA	C	coding	310	933	235	1167	45.0	-16	True	TATAAA	-15
PB.2729.34	chr12	-	2057	6	incomplete-splice_match	GNS	ENST00000258145.7	5122	14	41	28557	0	-2602	3prime_fragment	FALSE	canonical	1	420699	junction_5	181790.19416965262	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	131	958	75.0	-1	True	NA	NA
PB.10607.29	chr7	+	4908	32	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	134	2	134	0	intron_retention	FALSE	canonical	1	3722	junction_21	553993.6477799553	NA	7	1	TRUE	NA	NA	NA	C	coding	957	2874	183	3056	15.0	5	True	AATAAA	-25
PB.10607.28	chr7	+	7167	31	novel_in_catalog	GTF2I	novel	538	2	NA	NA	17	0	intron_retention	FALSE	canonical	1	3722	junction_21	557908.6412362204	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	373	3078	15.0	-16	True	AATAAA	-25
PB.908.7	chr1	+	2262	2	novel_not_in_catalog	RCSD1	novel	3044	6	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	3322	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-11	True	NA	NA
PB.10607.23	chr7	+	2807	26	incomplete-splice_match	GTF2I	ENST00000573035.5	4548	35	-3	11246	-3	-6	3prime_fragment	FALSE	canonical	1	3722	junction_23	547491.570111564	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2415	393	2807	55.0	-4860	False	NA	NA
PB.10607.22	chr7	+	3204	31	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-76	2695	-3	-1962	3prime_fragment	FALSE	canonical	1	3722	junction_21	556609.1788419521	NA	1	NA	TRUE	NA	NA	NA	C	coding	937	2811	393	3203	30.0	-4860	False	NA	NA
PB.10607.21	chr7	+	3411	33	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	42	junction_32	551726.3618447218	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	393	3266	75.0	-4860	False	AAGAAA	-40
PB.10607.20	chr7	+	3458	33	full-splice_match	GTF2I	ENST00000620879.4	4352	33	-76	970	-3	-237	multi-exon	FALSE	canonical	1	3722	junction_21	551517.8779255119	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	393	3266	20.0	-4860	False	ATTAAA	-24
PB.10607.27	chr7	+	3643	33	full-splice_match	GTF2I	ENST00000620879.4	4352	33	76	633	76	100	multi-exon	FALSE	canonical	1	3722	junction_21	551517.8779255119	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	241	3114	15.0	-6	True	ACTAAA	-15
PB.10607.26	chr7	+	3581	33	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	48	junction_32	551726.2025898867	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	392	3265	75.0	-4859	False	AAGAAA	-40
PB.10607.25	chr7	+	3784	34	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-2	9	any annotated donor/acceptor	FALSE	canonical	1	3722	junction_22	545103.5263893516	NA	7	2	TRUE	NA	NA	NA	C	coding	984	2955	392	3346	35.0	-4859	False	NA	NA
PB.10607.24	chr7	+	3933	35	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-2	101	any annotated donor/acceptor	FALSE	canonical	1	3722	junction_23	529412.4073731655	NA	1	1	TRUE	NA	NA	NA	C	coding	1003	3012	392	3403	10.0	-4859	False	ACTAAA	-16
PB.2321.4	chr11	+	11205	16	full-splice_match	CBL	ENST00000264033.5	11231	16	25	1	1	1	multi-exon	FALSE	canonical	1	118466	junction_1	18243.77535733459	NA	4	NA	TRUE	NA	NA	NA	C	coding	906	2721	118	2838	15.0	-53	False	AATAAA	-20
PB.2321.1	chr11	+	5609	16	full-splice_match	CBL	ENST00000264033.5	11231	16	9	5613	9	649	multi-exon	FALSE	canonical	1	118466	junction_1	18243.77535733459	NA	3	NA	TRUE	NA	NA	NA	C	coding	801	2406	449	2854	50.0	-69	False	AATAAA	-3
PB.2321.3	chr11	+	9999	16	full-splice_match	CBL	ENST00000264033.5	11231	16	24	1208	0	-1206	multi-exon	FALSE	canonical	1	118466	junction_1	18243.77535733459	NA	15	NA	TRUE	NA	NA	NA	C	coding	801	2406	434	2839	80.0	-54	False	AAAACA	-21
PB.2321.2	chr11	+	4973	16	full-splice_match	CBL	ENST00000264033.5	11231	16	9	6249	9	13	multi-exon	TRUE	canonical	1	118466	junction_1	18243.77535733459	NA	1	NA	TRUE	NA	NA	NA	C	coding	801	2406	449	2854	60.0	-69	False	TTTAAA	-27
PB.7517.22	chr21	+	5055	38	novel_in_catalog	TTC3	novel	769	9	NA	NA	-2	988	combination_of_known_junctions	FALSE	canonical	1	11239	junction_7	103973.2968092316	NA	1	NA	TRUE	NA	NA	NA	C	coding	1615	4845	211	5055	65.0	1	True	NA	NA
PB.8739.3	chr4	-	1844	7	full-splice_match	TMEM156	ENST00000381938.3	1935	7	13	78	-1	-78	multi-exon	FALSE	canonical	1	37538	junction_4	18384.943855110232	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	96	986	100.0	-18	True	NA	NA
PB.8160.1	chr3	-	3351	2	full-splice_match	TLR9	ENST00000360658.2	3870	2	518	1	518	-1	multi-exon	FALSE	canonical	1	16424	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	117	3215	25.0	-10	True	AATAAA	-15
PB.8160.2	chr3	-	2933	1	incomplete-splice_match	TLR9	ENST00000360658.2	3870	2	2149	2	2149	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	927	2784	15	2798	25.0	1621	False	AATAAA	-14
PB.2313.6	chr11	-	2069	9	full-splice_match	SLC37A4	ENST00000527992.5	2040	9	3	-32	3	0	multi-exon	FALSE	canonical	1	42339	junction_8	110345.67398181045	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	829	1515	30.0	-6	True	ATTAAA	-17
PB.2313.4	chr11	-	2685	9	incomplete-splice_match	SLC37A4	ENST00000525102.5	2844	10	30	242	4	0	intron_retention	TRUE	canonical	1	14376	junction_8	118419.57612071314	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	1445	2131	30.0	-5	True	ATTAAA	-17
PB.2313.5	chr11	-	2743	9	novel_in_catalog	SLC37A4	novel	2844	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	7785	junction_8	120347.24012492974	NA	7	NA	TRUE	NA	NA	NA	C	coding	228	687	1503	2189	30.0	-1	True	ATTAAA	-17
PB.2313.2	chr11	-	3732	7	novel_in_catalog	SLC37A4	novel	2844	10	NA	NA	-29	0	intron_retention	FALSE	canonical	1	273780	junction_3	59040.2033805967	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	2492	3178	30.0	-64	False	ATTAAA	-17
PB.2313.3	chr11	-	3377	8	incomplete-splice_match	SLC37A4	ENST00000527992.5	2040	9	-21	-32	5	0	intron_retention	FALSE	canonical	1	272255	junction_6	59578.132974220316	NA	4	NA	TRUE	NA	NA	NA	C	coding	228	687	2137	2823	30.0	-30	True	ATTAAA	-17
PB.9229.6	chr5	+	3926	27	novel_not_in_catalog	MTREX	novel	4192	27	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	10259	junction_8	143883.319019616	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	1129	3120	25.0	0	True	AATAAA	-13
PB.10477.5	chr7	-	3316	9	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	71352	junction_3	101847.49738940263	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	257	874	40.0	1	True	AATAAA	-22
PB.7406.4	chr20	-	8133	16	full-splice_match	DIDO1	ENST00000266070.8	8574	16	62	379	62	-374	multi-exon	FALSE	canonical	1	128548	junction_15	140041.09694838393	NA	11	2	TRUE	NA	NA	NA	C	coding	2240	6723	295	7017	20.0	4	True	ATTAAA	-21
PB.10477.4	chr7	-	4144	8	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	2	-2	intron_retention	FALSE	canonical	1	71352	junction_2	104518.13059357458	NA	14	NA	TRUE	NA	NA	NA	C	coding	205	618	247	864	40.0	-1	True	AATAAA	-22
PB.7406.5	chr20	-	4018	1	incomplete-splice_match	DIDO1	ENST00000266070.8	8574	16	55811	386	32265	-381	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	793	2382	528	2909	10.0	NA	False	ATTAAA	-14
PB.10743.3	chr7	+	2994	4	full-splice_match	ZNHIT1	ENST00000485387.1	2898	4	-98	2	-98	-2	multi-exon	FALSE	canonical	1	1521622	junction_3	160811.2119854279	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-3491	False	AATAAA	-15
PB.7406.7	chr20	-	6080	16	novel_not_in_catalog	DIDO1	novel	8574	16	NA	NA	70	-1491	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	153174.54478159512	NA	1	NA	TRUE	NA	NA	NA	C	coding	1189	3570	285	3854	20.0	12	True	TATAAA	-22
PB.10477.9	chr7	-	4078	1	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	-1	-7600	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-9	True	NA	NA
PB.6874.6	chr2	+	3215	5	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	-2	1542	intron_retention	FALSE	canonical	1	5065	junction_3	31045.127720586042	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	1322	1705	85.0	0	True	NA	NA
PB.8225.6	chr3	+	2857	5	novel_not_in_catalog	SAMMSON	novel	1657	4	NA	NA	0	-14450	any annotated donor/acceptor	FALSE	canonical	1	44	junction_4	703.0300046939675	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	1	True	AATAAA	-40
PB.10477.8	chr7	-	1743	5	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	0	1035	intron_retention	FALSE	canonical	1	85026	junction_2	120805.15478938595	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.895.1	chr1	+	2120	2	full-splice_match	MGST3	ENST00000461308.1	1002	2	0	-1118	0	0	multi-exon	FALSE	canonical	1	2017537	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-37	True	NA	NA
PB.8225.7	chr3	+	2627	1	novel_in_catalog	SAMMSON	novel	1657	4	NA	NA	0	-12404	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	134	405	69	473	30.0	1	True	ATTAAA	-13
PB.3385.7	chr14	+	2533	7	novel_in_catalog	KIAA0391	novel	603	2	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	8333	junction_4	139779.76755795366	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	379	2022	30.0	0	True	AATAAA	-30
PB.8225.5	chr3	+	1701	4	full-splice_match	SAMMSON	ENST00000641601.1	1847	4	126	20	0	-20	multi-exon	FALSE	canonical	1	533	junction_3	564.0392027352551	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.2717.14	chr12	+	2280	3	full-splice_match	USP15	ENST00000551206.5	1022	3	-14	-1244	-4	-66	multi-exon	FALSE	canonical	1	557697	junction_1	3982.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	23	391	80.0	-11	True	NA	NA
PB.546.1	chr1	-	1724	1	antisense	novelGene_DR1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	TTTAAA	-42
PB.3725.5	chr15	-	4458	31	novel_in_catalog	CYFIP1	novel	6793	31	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	135	3896	20.0	-44	True	AATAAA	-14
PB.6993.20	chr2	+	2349	13	incomplete-splice_match	XRCC5	ENST00000460284.5	2962	18	13990	-866	165	-2	5prime_fragment	FALSE	canonical	1	2752426	junction_6	513996.66710127814	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	54	1262	25.0	-6272	False	ATTAAA	-24
PB.2795.9	chr12	-	2749	11	novel_in_catalog	POC1B	novel	5840	2	NA	NA	-1	-10	no_combination_of_known_junctions	FALSE	canonical	1	13378	junction_1	60077.56644838404	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	107	1324	45.0	-4	True	AATAAA	-15
PB.10036.6	chr6	+	2567	11	novel_in_catalog	FBXO9	novel	452	5	NA	NA	-32	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	219608.42155928354	NA	8	NA	TRUE	NA	NA	NA	C	coding	271	816	375	1190	50.0	12	True	ATTAAA	-12
PB.10036.7	chr6	+	1845	14	novel_in_catalog	FBXO9	novel	452	5	NA	NA	-22	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	259343.53300075483	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	365	1666	45.0	-165	False	AATAAA	-24
PB.10036.4	chr6	+	1770	13	full-splice_match	FBXO9	ENST00000323557.11	3418	13	-55	1703	-44	-4	multi-exon	FALSE	non_canonical	0	0	junction_3	214965.15196013293	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	387	1700	15.0	0	True	ATTAAA	-30
PB.10036.5	chr6	+	2404	12	novel_in_catalog	FBXO9	novel	452	5	NA	NA	-35	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	223933.5751420146	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	378	1325	10.0	9	True	ATTAAA	-32
PB.10036.2	chr6	+	1424	11	incomplete-splice_match	FBXO9	ENST00000323557.11	3418	13	-55	5640	-44	647	3prime_fragment	TRUE	non_canonical	0	0	junction_3	233453.98462328716	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1038	387	1424	65.0	0	True	NA	NA
PB.10036.3	chr6	+	3845	1	novel_in_catalog	FBXO9	novel	452	5	NA	NA	-44	1254	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	AATACA	-43
PB.12061.1	chrX	+	2132	5	novel_not_in_catalog	EBP	novel	1775	5	NA	NA	19	-2	intron_retention	FALSE	canonical	1	169	junction_1	620201.0812758129	NA	2	1	TRUE	NA	NA	NA	C	coding	230	693	1183	1875	40.0	-13	True	AATAAA	-14
PB.6478.23	chr2	+	1763	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	122	3	-62	1	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	62	1588	45.0	-1	True	AATAAA	-16
PB.10092.41	chr6	-	1396	10	incomplete-splice_match	SYNCRIP	ENST00000369622.7	3023	11	332	4765	-31	-4765	3prime_fragment	FALSE	canonical	1	75283	junction_5	362571.2369216753	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1227	170	1396	60.0	-18	True	NA	NA
PB.12061.2	chrX	+	2018	5	novel_not_in_catalog	EBP	novel	1775	5	NA	NA	-22	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	620274.1233386252	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	1069	1761	40.0	-3	True	AATAAA	-14
PB.6478.22	chr2	+	5895	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	118	-4125	-66	4076	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	66	1592	40.0	-5	True	ATTAAA	-25
PB.8122.10	chr3	-	1788	6	full-splice_match	IP6K1	ENST00000321599.8	4456	6	-19	2687	-4	47	multi-exon	FALSE	canonical	1	114156	junction_5	89618.9935886361	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	340	1647	30.0	-5	True	ACTAAA	-17
PB.12061.3	chrX	+	1094	5	full-splice_match	EBP	ENST00000495186.5	1775	5	679	2	-19	-2	multi-exon	FALSE	canonical	1	447746	junction_1	426922.3566390615	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	145	837	40.0	0	True	AATAAA	-14
PB.6478.21	chr2	+	5945	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	-69	4074	intron_retention	FALSE	canonical	1	53848	junction_12	100113.69601058293	NA	1	1	TRUE	NA	NA	NA	C	coding	396	1191	69	1259	40.0	-8	True	ATTAAA	-23
PB.5674.10	chr19	+	1964	12	novel_in_catalog	CERS4	novel	531	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	6722	junction_1	150560.61358867513	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	471	1655	30.0	0	True	ATTAAA	-13
PB.11906.4	chr9	-	2655	1	incomplete-splice_match	NOTCH1	ENST00000277541.7	9306	34	48685	14	7744	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	319	960	72	1031	10.0	245	False	AATAAA	-15
PB.11700.25	chr9	+	3665	16	full-splice_match	SLC44A1	ENST00000374723.5	9640	16	29	5946	29	-4618	multi-exon	FALSE	canonical	1	6330	junction_15	167591.98353217522	NA	1	NA	TRUE	NA	NA	NA	C	coding	652	1959	219	2177	35.0	0	True	AATAAA	-14
PB.6478.26	chr2	+	5683	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	144	-3939	-40	3890	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	3	NA	TRUE	NA	NA	NA	C	coding	508	1527	40	1566	35.0	21	True	AATAAA	-15
PB.9687.13	chr6	+	2614	4	novel_in_catalog	DUSP22	novel	405	6	NA	NA	0	-232	combination_of_known_junctions	FALSE	canonical	1	4301	junction_1	228481.84311669058	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	561	869	50.0	8041	False	AATAAA	-41
PB.9687.12	chr6	+	3178	4	novel_in_catalog	DUSP22	novel	405	6	NA	NA	73	4	intron_retention	FALSE	canonical	1	4301	junction_1	228481.84311669058	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	462	770	10.0	8140	False	AATAAA	-26
PB.9687.15	chr6	+	2960	4	incomplete-splice_match	DUSP22	ENST00000604988.1	503	5	-53	-424	-53	-1	intron_retention	FALSE	canonical	1	3668	junction_1	228763.53338764462	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	122	559	20.0	-4332	False	AATAAA	-19
PB.9687.14	chr6	+	3309	5	novel_in_catalog	DUSP22	novel	405	6	NA	NA	12	0	intron_retention	FALSE	canonical	1	4665	junction_1	202632.38532423068	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	599	907	20.0	8053	False	AATAAA	-20
PB.9757.1	chr6	-	1406	10	full-splice_match	DTNBP1	ENST00000344537.9	1403	10	-13	10	3	-1	multi-exon	TRUE	canonical	1	93078	junction_4	76270.23752130024	NA	0	NA	TRUE	NA	NA	NA	A	coding	351	1056	187	1242	40.0	-74	True	AATAAA	-13
PB.10993.13	chr8	-	2344	6	full-splice_match	CNOT7	ENST00000523917.5	1885	6	22	-481	-1	481	multi-exon	FALSE	canonical	1	28667	junction_5	197293.3401629158	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	278	1012	45.0	0	True	TATAAA	-14
PB.70.3	chr1	-	2990	5	novel_not_in_catalog	GPR157	novel	5265	4	NA	NA	26	-923	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	20233.674320300797	NA	0	NA	TRUE	NA	NA	NA	B	coding	335	1008	118	1125	75.0	-1	True	NA	NA
PB.9994.4	chr6	+	2513	1	novel_in_catalog	BICRAL	novel	6510	15	NA	NA	1023	-82828	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	111	336	408	743	80.0	-2	True	NA	NA
PB.11700.21	chr9	+	4469	15	novel_in_catalog	SLC44A1	novel	9640	16	NA	NA	15	-4618	intron_retention	FALSE	canonical	1	2076	junction_14	165853.0613196728	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	233	2125	35.0	-14	True	AATAAA	-14
PB.7601.1	chr22	-	4774	1	full-splice_match	RIMBP3	ENST00000619918.1	6105	1	1010	321	1010	-321	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	1096	3291	1105	4395	65.0	NA	False	AAGAAA	-13
PB.7517.23	chr21	+	3791	34	novel_not_in_catalog	TTC3	novel	769	9	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	11239	junction_8	91971.66538054275	NA	13	1	TRUE	NA	NA	NA	C	coding	1194	3582	210	3791	75.0	2	True	NA	NA
PB.636.8	chr1	-	3683	5	full-splice_match	SIKE1	ENST00000060969.5	2190	5	13	-1506	13	1506	multi-exon	FALSE	canonical	1	259561	junction_4	53413.73605812928	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	58	681	35.0	-19	True	NA	NA
PB.1198.4	chr1	+	2476	5	full-splice_match	SPRTN	ENST00000295050.11	3468	5	212	780	4	-780	multi-exon	FALSE	canonical	1	118706	junction_4	8196.071772501751	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	125	1594	30.0	-33	True	AATAAA	-19
PB.3930.8	chr15	-	3323	15	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-33	-631	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	141604.36506677428	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	223	2124	10.0	263	False	ATTAAA	-18
PB.3930.9	chr15	-	2713	14	full-splice_match	CLPX	ENST00000300107.7	4695	14	-260	2242	-260	53	multi-exon	FALSE	canonical	1	351583	junction_13	80845.83778691056	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	450	2351	50.0	36	False	AATAAA	-7
PB.3930.6	chr15	-	3142	12	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-42	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	150781.31010766927	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	232	1833	75.0	254	False	TTTAAA	-43
PB.3930.7	chr15	-	3381	15	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-63	-631	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	141604.36506677428	NA	4	1	TRUE	NA	NA	NA	C	coding	633	1902	253	2154	10.0	233	False	ATTAAA	-18
PB.3930.4	chr15	-	3954	15	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-58	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	141604.36506677428	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	248	2149	75.0	238	False	TTTAAA	-43
PB.3930.5	chr15	-	3291	13	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-52	-25	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	147307.77638811103	NA	1	1	TRUE	NA	NA	NA	C	coding	565	1698	242	1939	75.0	244	False	TTTAAA	-43
PB.3930.2	chr15	-	4083	15	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-33	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	141604.36506677428	NA	23	NA	TRUE	NA	NA	NA	C	coding	633	1902	223	2124	75.0	263	False	TTTAAA	-43
PB.3930.3	chr15	-	3972	15	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-48	-25	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	141604.36506677428	NA	2	1	TRUE	NA	NA	NA	C	coding	633	1902	238	2139	75.0	248	False	TTTAAA	-43
PB.3930.1	chr15	-	4217	15	novel_not_in_catalog	CLPX	novel	4695	14	NA	NA	-19	-25	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	141604.36506677428	NA	5	1	TRUE	NA	NA	NA	C	coding	633	1902	209	2110	75.0	-25	True	TTTAAA	-43
PB.10263.4	chr6	-	2509	3	full-splice_match	FBXO30	ENST00000237281.4	9009	3	-7	6507	-7	-6507	multi-exon	FALSE	canonical	1	82261	junction_2	47967.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	175	2412	25.0	-2	True	ATTAAA	-16
PB.10263.1	chr6	-	4374	3	full-splice_match	FBXO30	ENST00000237281.4	9009	3	-59	4694	-59	-4694	multi-exon	FALSE	canonical	1	82261	junction_2	47967.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	227	2464	45.0	-54	True	AATAAA	-17
PB.12149.3	chrX	+	2482	7	full-splice_match	UPRT	ENST00000373383.8	2186	7	-3	-293	0	293	multi-exon	FALSE	canonical	1	72068	junction_1	34898.09206659999	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	171	1100	25.0	0	True	AATAAA	-40
PB.12149.2	chrX	+	2086	7	full-splice_match	UPRT	ENST00000373383.8	2186	7	99	1	60	-1	multi-exon	FALSE	canonical	1	72068	junction_1	34898.09206659999	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	69	998	15.0	-36	True	ATTAAA	-14
PB.12149.1	chrX	+	2314	8	novel_not_in_catalog	UPRT	novel	970	4	NA	NA	-21	5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	73009.402282675	NA	11	2	TRUE	NA	NA	NA	C	coding	169	510	192	701	30.0	-21	True	ATTAAA	-20
PB.10993.15	chr8	-	4145	2	full-splice_match	CNOT7	ENST00000523649.1	699	2	0	-3446	0	0	multi-exon	FALSE	canonical	1	28667	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-9	True	NA	NA
PB.12149.4	chrX	+	2019	6	novel_in_catalog	UPRT	novel	970	4	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	4462	junction_4	59217.786483454445	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	163	930	20.0	8	True	ATTAAA	-15
PB.1248.2	chr1	-	2614	4	full-splice_match	ZNF124	ENST00000340684.10	1674	4	-29	-911	-29	911	multi-exon	FALSE	canonical	1	52818	junction_3	42929.71167178068	NA	4	NA	TRUE	NA	NA	NA	C	coding	289	870	169	1038	25.0	NA	False	NA	NA
PB.2309.2	chr11	-	1987	14	full-splice_match	DDX6	ENST00000534980.6	6097	14	-35	4145	-22	-546	multi-exon	FALSE	canonical	1	216719	junction_13	122107.85909889656	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	342	1793	10.0	-22	True	AATATA	-14
PB.2309.1	chr11	-	2523	14	full-splice_match	DDX6	ENST00000534980.6	6097	14	-33	3607	-20	-8	multi-exon	FALSE	canonical	1	216719	junction_13	122107.85909889656	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	340	1791	65.0	-20	True	AATACA	-8
PB.5378.1	chr18	-	2389	4	full-splice_match	LINC00668	ENST00000578497.5	545	4	-17	-1827	-13	-1	multi-exon	FALSE	canonical	1	1116	junction_3	8657.857048176915	NA	2	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-144	False	NA	NA
PB.9248.3	chr5	+	4493	31	novel_not_in_catalog	KIF2A	novel	759	6	NA	NA	50424	91338	any annotated donor/acceptor	FALSE	canonical	1	1022	junction_23	77930.82055288237	NA	1	NA	TRUE	NA	NA	NA	C	coding	1016	3051	174	3224	20.0	-14	True	ATTAAA	-24
PB.531.3	chr1	+	2425	12	full-splice_match	ZNF326	ENST00000340281.8	2729	12	-3	307	0	5	multi-exon	FALSE	canonical	1	126504	junction_4	85565.27476650658	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	147	1895	25.0	2	True	AATAAA	-22
PB.531.2	chr1	+	2076	12	full-splice_match	ZNF326	ENST00000340281.8	2729	12	-4	657	-1	-345	multi-exon	FALSE	canonical	1	126504	junction_4	85565.27476650658	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	148	1896	20.0	1	True	AATAAA	-16
PB.7508.1	chr21	+	2548	6	full-splice_match	CLIC6	ENST00000349499.2	3806	6	1251	7	1251	-7	multi-exon	FALSE	canonical	1	45725	junction_1	14057.013204802792	NA	1	NA	TRUE	NA	NA	NA	A	coding	210	633	178	810	20.0	1646	False	TATAAA	-13
PB.5283.9	chr17	-	2793	19	novel_in_catalog	TMC6	novel	5268	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	37662	junction_13	129936.64766519543	NA	17	1	TRUE	NA	NA	NA	C	coding	578	1737	828	2564	0.0	2	True	ATTAAA	-17
PB.2288.2	chr11	-	1706	1	full-splice_match	C11orf71	ENST00000623205.2	1980	1	3	271	3	-271	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	123	372	178	549	35.0	-7	True	AATAAA	-22
PB.2288.1	chr11	-	1973	1	full-splice_match	C11orf71	ENST00000623205.2	1980	1	3	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	123	372	178	549	35.0	-7	True	NA	NA
PB.531.4	chr1	+	2433	12	novel_not_in_catalog	ZNF326	novel	1956	10	NA	NA	4	-3	any annotated donor/acceptor	FALSE	canonical	1	9060	junction_4	110253.80907398308	NA	3	NA	TRUE	NA	NA	NA	C	coding	376	1131	469	1599	10.0	9	True	AATACA	-15
PB.5283.5	chr17	-	2794	20	full-splice_match	TMC6	ENST00000590602.5	5268	20	13	2461	13	0	multi-exon	FALSE	canonical	1	97818	junction_19	103848.98235229196	NA	9	1	TRUE	NA	NA	NA	C	coding	805	2418	148	2565	0.0	1	True	ATTAAA	-17
PB.5283.4	chr17	-	2798	21	novel_not_in_catalog	TMC6	novel	5268	20	NA	NA	-13	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	134086.28925705826	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	152	2569	0.0	-4	True	ATTAAA	-17
PB.5283.6	chr17	-	2895	20	novel_in_catalog	TMC6	novel	5268	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	2008	junction_19	118160.51796049524	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	249	2666	0.0	-10	True	ATTAAA	-17
PB.5283.1	chr17	-	2943	20	novel_in_catalog	TMC6	novel	5268	20	NA	NA	-6	1	combination_of_known_junctions	TRUE	canonical	1	4724	junction_19	117725.23762257122	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	296	2713	0.0	-10	True	ATTAAA	-18
PB.5283.3	chr17	-	3328	20	novel_not_in_catalog	TMC6	novel	5268	20	NA	NA	316	0	any annotated donor/acceptor	FALSE	canonical	1	5406	junction_19	117616.17492257722	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	682	3099	0.0	5997	False	ATTAAA	-17
PB.9747.1	chr6	-	1317	8	novel_in_catalog	TBC1D7	novel	2229	8	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	16819	junction_7	123192.36588575857	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	289	1170	15.0	-2	True	AATAAA	-13
PB.9747.2	chr6	-	1278	8	full-splice_match	TBC1D7	ENST00000379300.7	1276	8	-5	3	-5	0	multi-exon	FALSE	canonical	1	43816	junction_7	114982.27876343665	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	250	1131	15.0	0	True	AATAAA	-13
PB.9747.3	chr6	-	1260	8	novel_in_catalog	TBC1D7	novel	2229	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	36288	junction_7	117252.90060795764	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	232	1113	15.0	-2	True	AATAAA	-13
PB.9747.4	chr6	-	1055	7	full-splice_match	TBC1D7	ENST00000379307.6	1084	7	29	0	1	0	multi-exon	FALSE	canonical	1	62527	junction_6	139134.90811608787	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	108	908	15.0	-18	True	AATAAA	-13
PB.9747.6	chr6	-	1136	8	full-splice_match	TBC1D7	ENST00000356436.8	1116	8	-24	4	0	-1	multi-exon	FALSE	canonical	1	62527	junction_7	109409.23743543816	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	109	990	15.0	-19	True	AATAAA	-12
PB.9747.7	chr6	-	1329	8	novel_in_catalog	TBC1D7	novel	2229	8	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	9315	junction_7	125505.32602911108	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	303	1184	15.0	4	True	AATAAA	-11
PB.9747.8	chr6	-	2604	5	incomplete-splice_match	TBC1D7	ENST00000356436.8	1116	8	-7	9626	6	2044	3prime_fragment	FALSE	canonical	1	62527	junction_4	125740.33015206378	NA	2	NA	TRUE	NA	NA	NA	C	coding	188	567	92	658	50.0	-2	True	AATAAA	-17
PB.5302.4	chr17	-	1545	12	full-splice_match	EIF4A3	ENST00000649764.1	1618	12	-20	93	11	1	multi-exon	FALSE	canonical	1	1105740	junction_3	253761.94680405714	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	186	1403	15.0	-1	True	CATAAA	-30
PB.5302.1	chr17	-	2520	12	full-splice_match	EIF4A3	ENST00000269349.7	1734	12	55	-841	11	841	multi-exon	FALSE	canonical	1	1105740	junction_3	253761.94680405714	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	186	1403	50.0	-1	True	ATTAAA	-19
PB.5302.3	chr17	-	2035	11	novel_in_catalog	EIF4A3	novel	1734	12	NA	NA	11	-3	intron_retention	FALSE	canonical	1	1105740	junction_3	263191.5544641203	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	964	1803	35.0	-1	True	ATTAAA	-20
PB.5302.2	chr17	-	1632	12	full-splice_match	EIF4A3	ENST00000649764.1	1618	12	-20	6	11	3	multi-exon	FALSE	canonical	1	1105740	junction_3	253761.94680405714	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	186	1403	40.0	-1	True	ATTAAA	-17
PB.5433.2	chr18	-	3724	16	full-splice_match	CDH2	ENST00000269141.7	4332	16	397	211	397	-96	multi-exon	FALSE	canonical	1	204916	junction_15	93642.5580840013	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	28	2748	90.0	-6	True	NA	NA
PB.5433.3	chr18	-	3372	16	full-splice_match	CDH2	ENST00000269141.7	4332	16	361	599	361	-484	multi-exon	FALSE	canonical	1	204916	junction_15	93642.5580840013	NA	3	1	TRUE	NA	NA	NA	C	coding	906	2721	64	2784	45.0	882	False	AATAAA	-19
PB.5433.1	chr18	-	4014	16	full-splice_match	CDH2	ENST00000269141.7	4332	16	320	-2	320	2	multi-exon	FALSE	canonical	1	204916	junction_15	93642.5580840013	NA	4	NA	TRUE	NA	NA	NA	C	coding	906	2721	105	2825	15.0	0	True	AATAAA	-22
PB.5433.4	chr18	-	3152	16	full-splice_match	CDH2	ENST00000269141.7	4332	16	398	782	398	-667	multi-exon	FALSE	canonical	1	204916	junction_15	93642.5580840013	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	27	2747	75.0	-5	True	NA	NA
PB.7615.2	chr22	+	2215	6	full-splice_match	COMT	ENST00000361682.10	2437	6	176	46	-5	-46	multi-exon	FALSE	canonical	1	454071	junction_1	788478.6963611383	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	207	1022	40.0	11	True	AAAAAG	-35
PB.5751.1	chr19	+	1459	11	full-splice_match	WDR83	ENST00000418543.7	1457	11	-3	1	-3	0	multi-exon	FALSE	canonical	1	40086	junction_1	56857.14026962665	NA	0	NA	TRUE	NA	NA	NA	A	coding	315	948	353	1300	10.0	-2956	False	AATAAA	-33
PB.8008.1	chr3	-	10435	23	incomplete-splice_match	TRANK1	ENST00000645898.1	10648	24	36553	-8	-27	2	5prime_fragment	FALSE	canonical	1	56500	junction_16	27933.87199006679	NA	2	NA	TRUE	NA	NA	NA	A	coding	2961	8886	93	8978	15.0	-28	True	TATAAA	-20
PB.7615.1	chr22	+	1323	6	full-splice_match	COMT	ENST00000361682.10	2437	6	165	949	-1	10	multi-exon	FALSE	canonical	1	454071	junction_1	788478.6963611383	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	218	1033	30.0	0	True	TATAAA	-31
PB.3115.1	chr13	-	4975	13	full-splice_match	PROSER1	ENST00000352251.7	5168	13	193	0	-46	0	multi-exon	FALSE	canonical	1	195977	junction_12	67206.60753456877	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	642	3476	25.0	-7	True	CATAAA	-16
PB.4036.1	chr15	-	3564	12	full-splice_match	CPEB1	ENST00000620182.4	2422	12	-34	-1108	-34	-1	multi-exon	FALSE	canonical	1	5300	junction_11	26358.93356864107	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	714	2174	5.0	1124	False	AATAAA	-14
PB.145.29	chr1	-	3630	13	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	80866	junction_4	427093.1135645283	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	222	1241	70.0	-9	True	NA	NA
PB.9995.10	chr6	+	1721	6	full-splice_match	RPL7L1	ENST00000493763.5	4476	6	279	2476	-6	119	multi-exon	FALSE	canonical	1	23424	junction_1	76276.63443125949	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	25	765	60.0	-3	True	NA	NA
PB.4036.2	chr15	-	3239	12	full-splice_match	CPEB1	ENST00000615198.4	2112	12	-56	-1071	-56	-1	multi-exon	FALSE	canonical	1	5872	junction_11	26251.557819812184	NA	1	NA	TRUE	NA	NA	NA	C	coding	561	1686	164	1849	5.0	730	False	AATAAA	-14
PB.145.21	chr1	-	3293	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-11	-75	combination_of_known_junctions	FALSE	canonical	1	187223	junction_11	352437.21360286116	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	159	1706	0.0	-28	False	AATAAA	-17
PB.145.20	chr1	-	3495	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	6	-76	combination_of_known_junctions	FALSE	canonical	1	43382	junction_12	372260.06828209345	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	248	1909	5.0	-9	True	AATAAA	-16
PB.145.25	chr1	-	3889	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	0	-2	intron_retention	FALSE	canonical	1	43711	junction_12	372186.5576305917	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	568	2229	80.0	-1	True	NA	NA
PB.145.24	chr1	-	6543	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	222513	junction_11	343630.6956847859	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	3700	4881	80.0	-21	True	NA	NA
PB.145.27	chr1	-	5925	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	17	-4	intron_retention	FALSE	canonical	1	43382	junction_12	460973.9013607193	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	3086	4267	80.0	28	True	NA	NA
PB.10508.2	chr7	+	3039	2	incomplete-splice_match	MRPL32	ENST00000223324.2	1035	3	176	5	0	-5	intron_retention	FALSE	canonical	1	406267	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	12	335	25.0	-1	True	NA	NA
PB.3078.9	chr13	-	2230	13	full-splice_match	FLT1	ENST00000615840.4	6453	13	-49	4272	0	-4253	multi-exon	FALSE	canonical	1	76669	junction_12	31906.255766785853	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	286	2229	60.0	-1	True	AAGAAA	-7
PB.3078.8	chr13	-	2360	13	full-splice_match	FLT1	ENST00000615840.4	6453	13	-50	4143	-1	-4124	multi-exon	FALSE	canonical	1	76669	junction_12	31906.255766785853	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	287	2350	45.0	-2	True	ATTAAA	-10
PB.3078.7	chr13	-	3591	13	full-splice_match	FLT1	ENST00000615840.4	6453	13	-56	2918	-7	-2899	multi-exon	FALSE	canonical	1	76669	junction_12	31906.255766785853	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	293	2356	75.0	146	False	CATAAA	-7
PB.3078.5	chr13	-	4340	13	full-splice_match	FLT1	ENST00000615840.4	6453	13	-53	2166	-4	-2147	multi-exon	FALSE	canonical	1	76669	junction_12	31906.255766785853	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	290	2353	85.0	-5	True	NA	NA
PB.3078.4	chr13	-	5172	6	novel_not_in_catalog	FLT1	novel	7092	30	NA	NA	65060	-82	intron_retention	FALSE	canonical	1	2808	junction_5	68433.76362702844	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	38	1120	15.0	4	True	NA	NA
PB.3078.3	chr13	-	6238	14	full-splice_match	FLT1	ENST00000639477.1	6337	14	17	82	0	-82	multi-exon	FALSE	canonical	1	1535	junction_1	47909.94329243173	NA	40	3	TRUE	NA	NA	NA	C	coding	665	1998	286	2283	15.0	-1	True	NA	NA
PB.3078.2	chr13	-	6451	13	full-splice_match	FLT1	ENST00000615840.4	6453	13	-99	101	-33	-82	multi-exon	FALSE	canonical	1	76669	junction_12	31906.255766785853	NA	3	NA	TRUE	NA	NA	NA	C	coding	687	2064	336	2399	15.0	103	False	NA	NA
PB.3078.1	chr13	-	2894	15	full-splice_match	FLT1	ENST00000541932.5	2969	15	0	75	0	-75	multi-exon	TRUE	canonical	1	43775	junction_1	41988.45030797524	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	286	2487	80.0	-1	True	NA	NA
PB.9248.6	chr5	+	3578	30	full-splice_match	IPO11	ENST00000325324.10	4356	30	-4	782	-4	91	multi-exon	FALSE	canonical	1	117982	junction_1	62642.4956851362	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	174	3101	60.0	-14	True	ATTAAA	-19
PB.2764.8	chr12	+	2300	18	full-splice_match	TBC1D15	ENST00000319106.12	2159	18	0	-141	0	2	multi-exon	FALSE	canonical	1	2596	junction_1	153022.34812721566	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	92	2140	25.0	0	True	ATTAAA	-21
PB.2764.9	chr12	+	2207	17	full-splice_match	TBC1D15	ENST00000485960.6	2489	17	0	282	0	1	multi-exon	FALSE	canonical	1	83706	junction_5	108905.92048988889	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	24	2048	25.0	0	True	ATTAAA	-20
PB.11584.12	chr9	+	1920	17	novel_in_catalog	CBWD5	novel	541	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1072.681016192605	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	81	623	25.0	NA	False	AATAAA	-15
PB.2764.4	chr12	+	3159	17	full-splice_match	TBC1D15	ENST00000485960.6	2489	17	0	-670	0	670	multi-exon	FALSE	canonical	1	83706	junction_5	108905.92048988889	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	24	2048	30.0	0	True	AATAAA	-15
PB.2764.5	chr12	+	2981	15	novel_in_catalog	TBC1D15	novel	863	7	NA	NA	0	666	no_combination_of_known_junctions	FALSE	canonical	1	163	junction_1	143547.71761355601	NA	2	NA	TRUE	NA	NA	NA	C	coding	616	1851	24	1874	35.0	0	True	AATAAA	-11
PB.2764.6	chr12	+	2956	16	full-splice_match	TBC1D15	ENST00000462788.6	1995	16	0	-961	0	678	multi-exon	FALSE	canonical	1	12418	junction_4	124241.72730780374	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	500	1837	45.0	0	True	AATAAA	-23
PB.2764.7	chr12	+	2466	17	full-splice_match	TBC1D15	ENST00000485960.6	2489	17	0	23	0	-23	multi-exon	FALSE	canonical	1	83706	junction_5	108905.92048988889	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	24	2048	85.0	0	True	NA	NA
PB.2764.1	chr12	+	2790	17	full-splice_match	TBC1D15	ENST00000485960.6	2489	17	-24	-277	17	277	multi-exon	FALSE	canonical	1	83706	junction_5	108905.92048988889	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	48	2072	30.0	-7041	False	AATAAA	-37
PB.2764.2	chr12	+	3220	18	full-splice_match	TBC1D15	ENST00000550746.5	6184	18	27	2937	-14	666	multi-exon	FALSE	canonical	1	22167	junction_6	147322.75108055997	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	38	2113	35.0	-7031	False	AATAAA	-11
PB.2764.3	chr12	+	3075	1	novel_in_catalog	TBC1D15	novel	863	7	NA	NA	-3	-42071	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-3	True	NA	NA
PB.10638.2	chr7	+	1976	14	full-splice_match	CD36	ENST00000394788.7	1942	14	-34	0	-1	0	multi-exon	FALSE	canonical	1	360928	junction_1	164727.7832518038	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	289	1707	30.0	0	True	AATAAA	-22
PB.1420.8	chr10	-	2577	9	full-splice_match	CCDC6	ENST00000263102.6	5811	9	88	3146	88	-157	multi-exon	FALSE	canonical	1	314944	junction_8	49091.206752711834	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	145	1569	65.0	-13	True	NA	NA
PB.6991.8	chr2	-	2421	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	13	-17	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	95898.4159214322	NA	3	NA	TRUE	NA	NA	NA	C	coding	214	645	274	918	65.0	-1	True	NA	NA
PB.10638.3	chr7	+	4592	15	full-splice_match	CD36	ENST00000447544.6	2298	15	-33	-2261	0	-8	multi-exon	FALSE	canonical	1	360928	junction_1	164415.78122658096	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	288	1706	35.0	1	True	AATAAA	-16
PB.10163.20	chr6	-	2306	13	incomplete-splice_match	REV3L	ENST00000368802.7	10701	32	44	77297	44	11418	3prime_fragment	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	1	NA	TRUE	NA	NA	NA	C	coding	675	2025	280	2304	65.0	-1	True	NA	NA
PB.6991.4	chr2	-	2703	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	76	213	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	95898.4159214322	NA	15	2	TRUE	NA	NA	NA	C	coding	214	645	211	855	15.0	12	True	ATTAAA	-15
PB.6991.2	chr2	-	2459	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	64	220	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	223	867	20.0	0	True	ATTAAA	-22
PB.6991.3	chr2	-	2536	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	30	218	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	2	1	TRUE	NA	NA	NA	C	coding	214	645	257	901	20.0	16	True	ATTAAA	-20
PB.11584.16	chr9	+	3630	15	novel_in_catalog	CBWD5	novel	541	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	1137.956627343189	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	50	592	30.0	NA	False	AATAAA	-18
PB.9248.7	chr5	+	5735	30	full-splice_match	IPO11	ENST00000325324.10	4356	30	-4	-1375	-4	1370	multi-exon	FALSE	canonical	1	117982	junction_1	62642.4956851362	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	174	3101	10.0	-14	True	ATTAAA	-18
PB.10638.1	chr7	+	2333	15	full-splice_match	CD36	ENST00000447544.6	2298	15	-35	0	-2	0	multi-exon	FALSE	canonical	1	360928	junction_1	164415.78122658096	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	290	1708	15.0	-1	True	ATTAAA	-16
PB.583.18	chr1	+	4748	6	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	6	-619	intron_retention	FALSE	canonical	0	0	junction_2	259887.93921273068	NA	4	1	TRUE	NA	NA	NA	C	coding	349	1050	2535	3584	5.0	6	True	AATAAA	-19
PB.7502.5	chr21	-	1888	8	novel_in_catalog	DONSON	novel	528	4	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	1	32852	junction_4	90537.4703203044	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	44	1483	20.0	-9	True	AATAAA	-19
PB.2462.5	chr12	-	2688	4	novel_in_catalog	CD69	novel	1676	5	NA	NA	0	-23	intron_retention	FALSE	canonical	1	402155	junction_3	72920.18631505423	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	1108	1716	70.0	-1	True	NA	NA
PB.9016.9	chr4	-	3435	13	full-splice_match	SLC10A7	ENST00000507030.5	1134	13	-222	-2079	-6	-437	multi-exon	FALSE	canonical	1	37825	junction_2	17146.573505287353	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	223	1299	25.0	-28	True	AATAAA	-16
PB.11584.14	chr9	+	1866	17	novel_in_catalog	CBWD5	novel	541	4	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1074.4510517003555	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	79	621	20.0	NA	False	AATAAA	-19
PB.3948.7	chr15	+	2301	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	264	4557	264	-3	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	352	2235	40.0	-2	True	AGTAAA	-22
PB.3948.6	chr15	+	2814	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	-28	4336	-28	218	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	644	2527	45.0	0	True	TATAAA	-15
PB.3948.5	chr15	+	3996	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	-42	3168	-42	1386	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	658	2541	60.0	-14	True	TATAAA	-4
PB.3948.4	chr15	+	3524	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	279	3319	279	1235	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	337	2220	35.0	13	True	AATGAA	-3
PB.3948.3	chr15	+	6679	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	259	184	259	-184	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	42	NA	TRUE	NA	NA	NA	C	coding	627	1884	357	2240	30.0	-7	True	AATAAA	-21
PB.3948.2	chr15	+	6855	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	257	10	257	-10	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	627	1884	359	2242	45.0	-9	True	AGTAAA	-7
PB.3948.1	chr15	+	4260	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	712	2150	712	-2150	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	378	1787	40.0	-7718	False	TATAAA	-11
PB.215.3	chr1	+	2328	9	full-splice_match	STX12	ENST00000373943.8	3079	9	69	682	-3	-682	multi-exon	FALSE	canonical	1	277135	junction_1	69070.16076063526	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	57	887	20.0	33	True	AATAAA	-17
PB.10802.13	chr7	+	2593	16	novel_not_in_catalog	ST7	novel	2114	14	NA	NA	14	-10	any annotated donor/acceptor	FALSE	canonical	1	74	junction_2	129642.90514136643	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	159	1676	60.0	38	True	NA	NA
PB.8852.5	chr4	+	1720	5	novel_not_in_catalog	THAP9	novel	553	4	NA	NA	-21	816	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	16917.68911524266	NA	1	1	TRUE	NA	NA	NA	C	coding	388	1164	557	1720	30.0	-4	True	AATAAA	-14
PB.3948.9	chr15	+	5295	1	novel_in_catalog	FEM1B	novel	7122	2	NA	NA	405	-6343	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-8025	False	NA	NA
PB.3948.8	chr15	+	4113	2	full-splice_match	FEM1B	ENST00000306917.4	7122	2	296	2713	296	1841	multi-exon	FALSE	canonical	1	329280	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	320	2203	45.0	30	True	NA	NA
PB.583.15	chr1	+	3664	5	novel_in_catalog	PRPF38B	novel	3693	6	NA	NA	0	127	intron_retention	FALSE	canonical	1	397428	junction_2	136167.2892958786	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	266	841	55.0	0	True	AATGAA	-3
PB.7502.4	chr21	-	2301	9	novel_in_catalog	DONSON	novel	528	4	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	33943	junction_5	90109.61492503172	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	957	1556	50.0	0	True	AATAAA	-8
PB.10802.11	chr7	+	2068	16	novel_in_catalog	ST7	novel	2114	14	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	1	1203	junction_1	105889.92302869157	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	308	1822	10.0	-2	True	AATAAA	-21
PB.1102.9	chr1	+	3923	12	novel_not_in_catalog	RCOR3	novel	564	6	NA	NA	-18	-367	any annotated donor/acceptor	FALSE	canonical	1	2828	junction_10	77446.75413245472	NA	2	NA	TRUE	NA	NA	NA	C	coding	489	1470	204	1673	20.0	1	True	ATTAAA	-14
PB.1102.8	chr1	+	4238	13	novel_in_catalog	RCOR3	novel	564	6	NA	NA	-19	-366	combination_of_known_junctions	FALSE	canonical	1	57931	junction_10	72834.82249636082	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	205	1290	20.0	0	True	ATTAAA	-15
PB.583.10	chr1	+	3371	7	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	1	365	intron_retention	FALSE	canonical	1	66880	junction_1	238263.64007643345	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	780	2592	3371	70.0	-2	True	NA	NA
PB.4638.1	chr17	+	2482	2	novel_not_in_catalog	DBIL5P	novel	840	2	NA	NA	-347	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	2	True	AATAAA	-6
PB.8287.8	chr3	+	2174	16	novel_not_in_catalog	DZIP3	novel	5350	33	NA	NA	-2	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	38630.165046157046	NA	12	1	TRUE	NA	NA	NA	C	coding	571	1716	458	2173	25.0	-318	False	NA	NA
PB.9248.5	chr5	+	3742	30	full-splice_match	IPO11	ENST00000325324.10	4356	30	-4	618	-4	255	multi-exon	FALSE	canonical	1	117982	junction_1	62642.4956851362	NA	2	NA	TRUE	NA	NA	NA	C	coding	975	2928	174	3101	40.0	-14	True	AGTAAA	-26
PB.11807.2	chr9	+	2268	15	full-splice_match	FPGS	ENST00000373247.6	2279	15	8	3	8	-3	multi-exon	FALSE	canonical	1	335829	junction_12	178779.31903521132	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	169	1806	25.0	1	True	ATTAAA	-25
PB.7250.1	chr20	-	1655	12	full-splice_match	PIGU	ENST00000217446.7	1632	12	-23	0	-18	0	multi-exon	FALSE	canonical	1	33596	junction_8	148541.07699469465	NA	0	NA	TRUE	NA	NA	NA	A	coding	435	1308	24	1331	25.0	-17	True	AATAAA	-22
PB.7199.2	chr20	-	9194	40	full-splice_match	RALGAPA2	ENST00000202677.11	6152	40	-155	-2887	-155	-328	multi-exon	FALSE	canonical	1	61305	junction_39	27700.564564273544	NA	2	NA	TRUE	NA	NA	NA	C	coding	1873	5622	164	5785	20.0	-1	True	GATAAA	-16
PB.4592.22	chr16	+	2508	8	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-310	-5	any annotated donor/acceptor	FALSE	canonical	1	945	junction_1	154291.88630247384	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	311	1186	20.0	-349	False	AATAAA	-14
PB.4592.20	chr16	+	1872	6	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	0	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	167165.24889868707	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	63	677	25.0	1	True	AATAAA	-12
PB.4592.21	chr16	+	2614	8	incomplete-splice_match	IRF8	ENST00000268638.9	3030	9	4202	5	-126	-5	5prime_fragment	FALSE	canonical	1	202316	junction_5	98389.73310695148	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	12	1292	20.0	1	True	AATAAA	-14
PB.1102.3	chr1	+	2689	12	full-splice_match	RCOR3	ENST00000419091.6	2041	12	-80	-568	-35	0	multi-exon	FALSE	canonical	1	137611	junction_10	50599.21168464424	NA	2	NA	TRUE	NA	NA	NA	C	coding	549	1650	221	1870	25.0	-3484	False	AATATA	-19
PB.1102.2	chr1	+	4225	13	novel_in_catalog	RCOR3	novel	564	6	NA	NA	-43	-366	combination_of_known_junctions	FALSE	canonical	1	2383	junction_2	93648.49377336954	NA	5	NA	TRUE	NA	NA	NA	C	coding	581	1746	229	1974	20.0	-3492	False	ATTAAA	-15
PB.1102.1	chr1	+	1856	11	full-splice_match	RCOR3	ENST00000452621.6	1827	11	-34	5	-34	-5	multi-exon	FALSE	canonical	1	137611	junction_10	53062.35413209633	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	220	1557	30.0	-3483	False	AATAAA	-18
PB.11192.3	chr8	+	4294	15	full-splice_match	CRISPLD1	ENST00000262207.8	4287	15	-9	2	-9	-2	multi-exon	FALSE	canonical	1	77181	junction_1	22056.670866064025	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	478	1980	35.0	1	True	NA	NA
PB.10067.29	chr6	+	3928	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-49	-428	combination_of_known_junctions	FALSE	canonical	1	48214	junction_2	161694.7799511881	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2844	1083	3926	65.0	-2	True	NA	NA
PB.10067.28	chr6	+	4028	23	full-splice_match	SENP6	ENST00000370010.6	4644	23	589	27	51	0	multi-exon	FALSE	canonical	1	103972	junction_5	128961.80948355497	NA	15	NA	TRUE	NA	NA	NA	C	coding	1105	3318	428	3745	70.0	-1	True	NA	NA
PB.55.9	chr1	-	2265	12	full-splice_match	NOL9	ENST00000377705.5	6649	12	4	4380	4	-4380	multi-exon	FALSE	canonical	1	81091	junction_11	57773.68582997077	NA	1	1	TRUE	NA	NA	NA	C	coding	702	2109	30	2138	35.0	-19	True	NA	NA
PB.55.8	chr1	-	2327	12	full-splice_match	NOL9	ENST00000377705.5	6649	12	0	4322	0	-4322	multi-exon	FALSE	canonical	1	81091	junction_11	57773.68582997077	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	34	2142	15.0	-23	True	TTTAAA	-15
PB.10067.23	chr6	+	4406	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-56	16	combination_of_known_junctions	FALSE	canonical	1	48214	junction_2	161694.7799511881	NA	0	NA	TRUE	NA	NA	NA	C	coding	996	2991	1090	4080	25.0	-9	True	AATAAA	-35
PB.10067.22	chr6	+	2684	15	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-57	0	no_combination_of_known_junctions	FALSE	canonical	1	12274	junction_1	175859.71526179378	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	889	2640	15.0	-10	True	ATTAAA	-17
PB.10067.21	chr6	+	2723	2	incomplete-splice_match	SENP6	ENST00000493959.6	867	6	-356	11266	-59	-11266	intron_retention	FALSE	canonical	1	279869	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-12	True	NA	NA
PB.10067.20	chr6	+	4167	24	novel_not_in_catalog	SENP6	novel	4644	23	NA	NA	-59	-1	any annotated donor/acceptor	FALSE	canonical	1	18115	junction_13	171372.27443473414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	658	3858	45.0	-12	True	AATAAA	-18
PB.10067.27	chr6	+	2875	17	novel_not_in_catalog	SENP6	novel	4644	23	NA	NA	-51	1	any annotated donor/acceptor	FALSE	canonical	1	9948	junction_14	193689.66596707606	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	1085	2830	10.0	-4	True	ATTAAA	-18
PB.3424.1	chr14	+	2115	5	full-splice_match	ATP5S	ENST00000554438.5	2008	5	-1	-106	-1	106	multi-exon	FALSE	canonical	1	42792	junction_1	64336.597394095996	NA	3	NA	TRUE	NA	NA	NA	C	coding	199	600	74	673	85.0	-1	True	NA	NA
PB.3424.2	chr14	+	2283	5	full-splice_match	ATP5S	ENST00000554438.5	2008	5	0	-275	0	275	multi-exon	FALSE	canonical	1	42792	junction_1	64336.597394095996	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	73	672	85.0	0	True	NA	NA
PB.10067.24	chr6	+	3690	24	novel_in_catalog	SENP6	novel	4644	23	NA	NA	258	1	combination_of_known_junctions	FALSE	canonical	1	24242	junction_5	154944.30375017854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1111	3336	44	3379	40.0	-29	False	AATAAA	-20
PB.11648.7	chr9	-	2478	10	novel_not_in_catalog	IPPK	novel	4401	13	NA	NA	135	-20201	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	47186.43941736745	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	143	1342	90.0	0	True	NA	NA
PB.11817.1	chr9	-	2970	17	full-splice_match	CIZ1	ENST00000372938.9	2984	17	28	-14	-4	5	multi-exon	FALSE	canonical	1	289975	junction_16	276455.6211979304	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	136	2832	15.0	10	True	AATAAA	-28
PB.4717.1	chr17	+	2512	15	novel_in_catalog	ALOX12P2	novel	4326	14	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	1	8938	junction_2	5492.190835028163	NA	2	1	TRUE	NA	NA	NA	B	coding	168	507	1664	2170	35.0	0	True	ATTAAA	-5
PB.4717.2	chr17	+	2558	15	novel_in_catalog	ALOX12P2	novel	4326	14	NA	NA	26	-3	combination_of_known_junctions	TRUE	canonical	1	8938	junction_2	5293.0071277187635	NA	0	NA	TRUE	NA	NA	NA	B	coding	186	561	1658	2218	40.0	6	True	ATTAAA	-3
PB.1325.8	chr10	+	1735	11	novel_not_in_catalog	MLLT10	novel	4955	23	NA	NA	81	-3	any annotated donor/acceptor	FALSE	canonical	1	15349	junction_9	78514.5215427694	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	242	1138	25.0	18	True	AATAAA	-17
PB.5611.2	chr19	+	2710	11	novel_in_catalog	FZR1	novel	5212	14	NA	NA	20	476	intron_retention	FALSE	canonical	1	180696	junction_1	99177.34592541786	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	217	1401	90.0	-18	True	NA	NA
PB.5611.3	chr19	+	3048	14	full-splice_match	FZR1	ENST00000441788.6	5212	14	27	2137	27	957	multi-exon	FALSE	canonical	1	180696	junction_1	89093.57973275983	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	210	1691	5.0	-11	True	NA	NA
PB.5611.4	chr19	+	1856	14	full-splice_match	FZR1	ENST00000441788.6	5212	14	30	3326	30	165	multi-exon	FALSE	canonical	1	180696	junction_1	89093.57973275983	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	207	1688	30.0	-8	True	ATTAAA	-13
PB.7506.5	chr21	+	3356	4	novel_not_in_catalog	MRPS6	novel	909	5	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	1	13889	junction_2	253126.35352373373	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	505	2922	10.0	0	True	AATAAA	-19
PB.7506.4	chr21	+	935	3	full-splice_match	MRPS6	ENST00000399312.2	990	3	55	0	29	0	multi-exon	FALSE	canonical	1	580817	junction_2	53282.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	124	501	10.0	0	True	AATAAA	-19
PB.7506.7	chr21	+	3437	2	full-splice_match	SLC5A3	ENST00000381151.4	11576	2	9	8130	9	-8130	multi-exon	FALSE	canonical	1	79930	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	718	2157	504	2660	35.0	1	True	AGTAAA	-17
PB.7506.6	chr21	+	2988	3	incomplete-splice_match	MRPS6	ENST00000477091.5	1061	5	29	36792	29	-36792	3prime_fragment	FALSE	canonical	1	26931	junction_1	12804.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.2754.1	chr12	+	1423	7	full-splice_match	YEATS4	ENST00000247843.6	1434	7	10	1	3	-1	multi-exon	FALSE	canonical	1	328502	junction_1	106789.16444213805	NA	0	NA	TRUE	NA	NA	NA	A	coding	227	684	261	944	10.0	-38	True	AATAAA	-18
PB.7506.3	chr21	+	5432	4	novel_not_in_catalog	MRPS6	novel	909	5	NA	NA	27	-36771	any annotated donor/acceptor	FALSE	canonical	1	10357	junction_2	28616.273377223668	NA	2	NA	TRUE	NA	NA	NA	C	coding	729	2190	507	2696	20.0	-2	True	AATAAA	-16
PB.7506.2	chr21	+	8652	2	full-splice_match	SLC5A3	ENST00000381151.4	11576	2	-23	2947	-23	-2947	multi-exon	FALSE	canonical	1	79930	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	718	2157	536	2692	85.0	-31	True	NA	NA
PB.661.1	chr1	+	3520	11	novel_not_in_catalog	SRGAP2C	novel	7204	10	NA	NA	148	1214	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	114332.62863544247	NA	9	NA	TRUE	NA	NA	NA	C	coding	428	1287	909	2195	65.0	NA	False	ATTAAA	-9
PB.7506.8	chr21	+	11561	2	full-splice_match	SLC5A3	ENST00000381151.4	11576	2	11	4	11	-4	multi-exon	FALSE	canonical	1	79930	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	718	2157	502	2658	30.0	3	True	AATAAA	-11
PB.745.4	chr1	+	2701	8	novel_not_in_catalog	ZNF687	novel	893	2	NA	NA	-6	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	120408.28509157448	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	916	2013	20.0	7	True	ATTAAA	-15
PB.745.5	chr1	+	4608	10	novel_not_in_catalog	ZNF687	novel	893	2	NA	NA	223	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	123438.11086692417	NA	11	2	TRUE	NA	NA	NA	C	coding	1237	3714	199	3912	5.0	2	True	ATTAAA	-23
PB.4707.4	chr17	-	3980	11	full-splice_match	DHX33	ENST00000572490.1	2564	11	-200	-1216	-32	1212	multi-exon	FALSE	canonical	1	36295	junction_10	53899.73636262055	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	448	2052	95.0	20	False	AAGAAA	-33
PB.4707.3	chr17	-	4019	12	full-splice_match	DHX33	ENST00000225296.7	5618	12	234	1365	3	1212	multi-exon	FALSE	canonical	1	105478	junction_11	34400.586361521935	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	67	2091	95.0	142	False	AAGAAA	-33
PB.41.1	chr1	+	5297	13	full-splice_match	TP73	ENST00000354437.8	2140	13	-253	-2904	-208	-4	multi-exon	FALSE	canonical	1	11249	junction_12	13444.049473651903	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	364	1863	25.0	0	True	AATAAA	-12
PB.4707.1	chr17	-	4536	12	full-splice_match	DHX33	ENST00000225296.7	5618	12	81	1001	-63	-1001	multi-exon	FALSE	canonical	1	105478	junction_11	34400.586361521935	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	121	2244	85.0	-11	True	NA	NA
PB.41.3	chr1	+	5380	14	full-splice_match	TP73	ENST00000378295.8	5188	14	-188	-4	-188	4	multi-exon	FALSE	canonical	1	15365	junction_1	9948.948747058535	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	344	2254	35.0	1	True	AATAAA	-21
PB.11185.27	chr8	-	2980	10	full-splice_match	STAU2	ENST00000517542.5	1695	10	-10	-1275	-1	-8	multi-exon	FALSE	canonical	1	15533	junction_9	96563.81688120383	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	108	1529	50.0	581	False	AATAAA	-9
PB.11185.32	chr8	-	1685	12	novel_in_catalog	STAU2	novel	2646	12	NA	NA	-1	63	combination_of_known_junctions	FALSE	canonical	1	17413	junction_11	92657.94381192875	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	243	1682	80.0	3	True	AAAACA	-44
PB.303.2	chr1	-	2658	15	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	1	26090	junction_13	217201.31054472702	NA	2	NA	TRUE	NA	NA	NA	C	coding	448	1347	109	1455	45.0	4	True	AATAAA	-10
PB.5120.1	chr17	-	2131	16	novel_not_in_catalog	MBTD1	novel	5382	17	NA	NA	-34	29	any annotated donor/acceptor	FALSE	canonical	1	24739	junction_12	44940.61068694501	NA	0	NA	TRUE	NA	NA	NA	A	coding	584	1752	379	2130	65.0	1007	False	AAAAAG	-14
PB.11185.26	chr8	-	3037	12	full-splice_match	STAU2	ENST00000355780.9	4061	12	-26	1050	13	-107	multi-exon	FALSE	canonical	1	57923	junction_1	80314.49220192389	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	246	1685	55.0	0	True	AATAAA	-10
PB.10828.9	chr7	+	2251	6	full-splice_match	CALU	ENST00000535011.6	3210	6	58	901	8	0	multi-exon	FALSE	canonical	1	12695	junction_5	812095.2292072648	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	95	769	90.0	-21	True	NA	NA
PB.10828.8	chr7	+	2821	8	full-splice_match	CALU	ENST00000479257.5	2572	8	-54	-195	8	195	multi-exon	FALSE	canonical	1	27271	junction_1	1073055.8650837203	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	886	1857	25.0	-21	True	ATTAAA	-19
PB.10828.7	chr7	+	1284	7	full-splice_match	CALU	ENST00000249364.8	3357	7	7	2066	7	-528	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	96	1043	20.0	-22	True	NA	NA
PB.10828.6	chr7	+	2415	7	full-splice_match	CALU	ENST00000249364.8	3357	7	44	898	-18	0	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	59	1006	90.0	15	True	NA	NA
PB.10828.5	chr7	+	3342	7	full-splice_match	CALU	ENST00000249364.8	3357	7	18	-3	-3	0	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	85	1032	20.0	-11	True	AATAAA	-18
PB.10828.4	chr7	+	1478	7	full-splice_match	CALU	ENST00000249364.8	3357	7	1	1878	1	-340	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	102	1049	65.0	-28	True	AAGAAA	-15
PB.10828.3	chr7	+	2903	7	novel_not_in_catalog	CALU	novel	3210	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	8098	junction_2	937785.580089503	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	1003	1494	90.0	-29	True	NA	NA
PB.10828.2	chr7	+	3479	7	novel_in_catalog	CALU	novel	3210	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	27271	junction_1	920405.0217352534	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	1123	2070	90.0	-29	True	NA	NA
PB.10828.1	chr7	+	3555	8	novel_not_in_catalog	CALU	novel	3210	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	296	junction_2	1141427.5741871202	NA	4	1	TRUE	NA	NA	NA	C	coding	241	726	524	1249	25.0	-29	True	AATAAA	-14
PB.1420.3	chr10	-	6180	9	full-splice_match	CCDC6	ENST00000263102.6	5811	9	-371	2	-371	-2	multi-exon	FALSE	canonical	1	314944	junction_8	49091.206752711834	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	604	2028	25.0	3	True	AATAAA	-18
PB.2341.11	chr11	+	1562	9	novel_in_catalog	TBRG1	novel	1634	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	15417	junction_3	200228.9978802006	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	802	1365	20.0	2	True	AATAAA	-12
PB.2341.10	chr11	+	3237	8	full-splice_match	TBRG1	ENST00000284290.8	4468	8	0	1231	0	-635	multi-exon	FALSE	canonical	1	127819	junction_3	156987.6205987762	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	745	1308	75.0	0	True	NA	NA
PB.1420.6	chr10	-	3005	9	full-splice_match	CCDC6	ENST00000263102.6	5811	9	101	2705	101	284	multi-exon	FALSE	canonical	1	314944	junction_8	49091.206752711834	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	132	1556	60.0	0	True	ATTAAA	-10
PB.1420.7	chr10	-	2604	9	full-splice_match	CCDC6	ENST00000263102.6	5811	9	218	2989	218	0	multi-exon	FALSE	canonical	1	314944	junction_8	49091.206752711834	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	15	1439	25.0	10	True	AATAAA	-25
PB.1420.4	chr10	-	5530	10	novel_not_in_catalog	CCDC6	novel	5811	9	NA	NA	101	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	140205.3613477982	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	400	1377	25.0	0	True	AATAAA	-19
PB.2056.19	chr11	+	2331	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	3	-652	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	0	True	AATACA	-23
PB.2423.12	chr12	+	2955	6	novel_in_catalog	COPS7A	novel	2127	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	572253	junction_1	142993.49176714304	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	376	786	40.0	-7	True	AATAAA	-15
PB.2423.13	chr12	+	2026	7	full-splice_match	COPS7A	ENST00000534947.5	2034	7	-4	12	-4	7	multi-exon	FALSE	canonical	1	572253	junction_1	131539.89974581433	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	375	1202	30.0	-6	True	AATAAA	-22
PB.2423.10	chr12	+	1953	7	incomplete-splice_match	COPS7A	ENST00000539735.5	1832	8	86	-28	-19	0	intron_retention	FALSE	canonical	1	98998	junction_1	304945.2181485499	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	130	921	40.0	0	True	AATAAA	-15
PB.2423.11	chr12	+	1968	6	incomplete-splice_match	COPS7A	ENST00000543939.5	1728	7	150	-43	-18	-6	5prime_fragment	FALSE	canonical	1	68518	junction_1	323484.31430868484	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-7134	False	AATAAA	-26
PB.2423.16	chr12	+	1744	8	novel_not_in_catalog	COPS7A	novel	2127	8	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	389466.40409940685	NA	5	1	TRUE	NA	NA	NA	C	coding	276	831	98	928	40.0	-2	True	AATAAA	-14
PB.1879.1	chr11	+	1731	9	full-splice_match	DEPDC7	ENST00000241051.7	1755	9	23	1	11	-1	multi-exon	TRUE	canonical	1	69745	junction_1	30890.67487704623	NA	0	NA	TRUE	NA	NA	NA	A	coding	511	1536	70	1605	25.0	-24	True	AATAAA	-15
PB.2423.14	chr12	+	2191	6	incomplete-splice_match	COPS7A	ENST00000534947.5	2034	7	-3	25	-3	-6	intron_retention	FALSE	canonical	1	572253	junction_1	138971.47228838012	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	374	1165	45.0	-5	True	AATAAA	-9
PB.2423.15	chr12	+	2144	8	novel_in_catalog	COPS7A	novel	2127	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2537	junction_1	400201.4929393157	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	552	1328	40.0	-2	True	AATAAA	-14
PB.1276.1	chr10	+	2143	2	novel_not_in_catalog	FAM208B	novel	8626	21	NA	NA	0	-22242	any annotated donor/acceptor	FALSE	canonical	1	4607	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.11529.1	chr9	+	7024	9	full-splice_match	RGP1	ENST00000378078.4	7018	9	-6	0	-6	0	multi-exon	FALSE	canonical	1	180572	junction_1	42295.04733251134	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	148	1323	90.0	-6	True	NA	NA
PB.11529.2	chr9	+	2841	9	full-splice_match	RGP1	ENST00000378078.4	7018	9	-6	4183	-6	250	multi-exon	FALSE	canonical	1	180572	junction_1	42295.04733251134	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	148	1323	30.0	-6	True	AAAACA	-12
PB.11529.3	chr9	+	6363	9	full-splice_match	RGP1	ENST00000378078.4	7018	9	29	626	25	-626	multi-exon	FALSE	canonical	1	180572	junction_1	42295.04733251134	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	113	1288	45.0	29	True	AATAAA	-30
PB.11529.4	chr9	+	6647	9	full-splice_match	RGP1	ENST00000378078.4	7018	9	16	355	12	-355	multi-exon	FALSE	canonical	1	180572	junction_1	42295.04733251134	NA	2	NA	TRUE	NA	NA	NA	C	coding	391	1176	126	1301	30.0	16	True	AATAAA	-18
PB.11529.5	chr9	+	5758	10	novel_not_in_catalog	RGP1	novel	7018	9	NA	NA	59	-664	intron_retention	FALSE	canonical	1	6943	junction_9	78212.74563792159	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	79	1254	85.0	-7609	False	NA	NA
PB.11648.3	chr9	-	2860	13	novel_not_in_catalog	IPPK	novel	4401	13	NA	NA	134	-2	any annotated donor/acceptor	FALSE	canonical	1	1380	junction_1	46169.31943303607	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	144	1586	30.0	-1	True	NA	NA
PB.1327.6	chr10	+	922	8	full-splice_match	COMMD3	ENST00000376836.7	1342	8	415	5	3	0	multi-exon	FALSE	canonical	1	697887	junction_1	145089.95870880398	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	30	617	35.0	-20	True	AATAAA	-19
PB.1327.7	chr10	+	2889	1	novel_in_catalog	COMMD3	novel	1342	8	NA	NA	3	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	178	537	30	566	30.0	-20	True	AATAAA	-19
PB.1327.4	chr10	+	3805	2	incomplete-splice_match	COMMD3	ENST00000483684.1	722	6	-1496	5	2	-2	intron_retention	FALSE	canonical	1	1015104	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	31	567	40.0	-21	True	AATAAA	-17
PB.1327.5	chr10	+	1456	5	full-splice_match	COMMD3	ENST00000463688.6	1407	5	-52	3	3	0	multi-exon	FALSE	canonical	1	697887	junction_1	142542.82537276298	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	30	383	35.0	-20	True	AATAAA	-19
PB.1327.2	chr10	+	2290	5	full-splice_match	COMMD3	ENST00000602574.5	2290	5	-3	3	-3	0	multi-exon	FALSE	canonical	1	697887	junction_1	133326.27496554272	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	36	389	35.0	-26	True	AATAAA	-19
PB.1327.3	chr10	+	3917	1	novel_in_catalog	COMMD3	novel	1342	8	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	178	537	32	568	35.0	-22	True	AATAAA	-19
PB.4894.10	chr17	+	3078	20	full-splice_match	RHOT1	ENST00000394692.6	2960	20	-119	1	1	-1	multi-exon	FALSE	canonical	1	9618	junction_3	151265.44842731566	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	133	2085	15.0	-16	False	AATAAA	-19
PB.1327.1	chr10	+	2502	3	novel_in_catalog	COMMD3	novel	1342	8	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	697887	junction_1	143329.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	38	397	40.0	-28	True	AATAAA	-17
PB.1327.8	chr10	+	2479	3	incomplete-splice_match	COMMD3	ENST00000602574.5	2290	5	3	3	3	0	intron_retention	FALSE	canonical	1	697887	junction_1	158608.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	30	371	35.0	-20	True	AATAAA	-19
PB.1327.9	chr10	+	2376	4	full-splice_match	COMMD3	ENST00000468179.6	1344	4	-10	-1022	3	0	multi-exon	FALSE	canonical	1	697887	junction_1	133873.55372971253	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	30	383	35.0	-20	True	AATAAA	-19
PB.308.4	chr1	+	1939	5	full-splice_match	AKIRIN1	ENST00000432648.7	2741	5	50	752	-15	453	multi-exon	FALSE	canonical	1	346640	junction_1	174229.70502669027	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	109	687	90.0	-15	True	NA	NA
PB.308.7	chr1	+	2520	5	full-splice_match	AKIRIN1	ENST00000432648.7	2741	5	52	169	-13	-169	multi-exon	FALSE	canonical	1	346640	junction_1	174229.70502669027	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	107	685	20.0	-13	True	AATAAA	-20
PB.3414.1	chr14	-	1711	19	full-splice_match	POLE2	ENST00000216367.9	1776	19	69	-4	-24	-1	multi-exon	FALSE	canonical	1	40433	junction_1	35096.30503066605	NA	0	NA	TRUE	NA	NA	NA	A	coding	527	1584	32	1615	25.0	-1	True	AATAAA	-16
PB.10023.11	chr6	+	4510	18	full-splice_match	CD2AP	ENST00000359314.5	5412	18	389	513	389	-513	multi-exon	FALSE	canonical	1	199298	junction_1	58126.295089549356	NA	2	NA	TRUE	NA	NA	NA	C	coding	639	1920	68	1987	35.0	-34	True	ATTAAA	-16
PB.1479.12	chr10	+	2609	5	incomplete-splice_match	VCL	ENST00000372755.7	6489	21	109115	1353	2301	-150	5prime_fragment	FALSE	canonical	1	1029361	junction_1	266763.8599345637	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	259	768	95.0	-6964	False	NA	NA
PB.10873.1	chr7	-	4482	2	novel_not_in_catalog	KIAA1549	novel	12379	20	NA	NA	123	-101500	any annotated donor/acceptor	FALSE	canonical	1	1288	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	156	471	2451	2921	30.0	-21	True	NA	NA
PB.11800.1	chr9	-	631	7	full-splice_match	RPL12	ENST00000361436.9	633	7	0	2	0	1	multi-exon	FALSE	canonical	1	16284	junction_4	1059874.6484070127	NA	0	NA	TRUE	NA	NA	NA	A	coding	165	498	89	586	5.0	0	True	AATAAA	-21
PB.11873.1	chr9	-	8607	23	full-splice_match	TSC1	ENST00000298552.8	8616	23	9	0	-1	0	multi-exon	FALSE	canonical	1	95250	junction_10	38090.7361196984	NA	2	NA	TRUE	NA	NA	NA	C	coding	1164	3495	226	3720	15.0	-9	True	AATAAA	-21
PB.2916.9	chr12	+	3253	13	novel_in_catalog	TRAFD1	novel	2697	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	1830	junction_5	209663.79150935047	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	1227	2441	10.0	-3	True	AATAAA	-18
PB.2916.8	chr12	+	2618	12	novel_not_in_catalog	TRAFD1	novel	2697	12	NA	NA	2	-5	any annotated donor/acceptor	FALSE	canonical	1	3868	junction_5	155614.5960973631	NA	3	NA	TRUE	NA	NA	NA	C	coding	293	882	930	1811	15.0	-13	True	AATAAA	-13
PB.8360.4	chr3	-	3022	1	incomplete-splice_match	HEG1	ENST00000311127.8	9156	17	85459	1768	1657	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	-128	False	NA	NA
PB.2916.1	chr12	+	3533	11	novel_in_catalog	TRAFD1	novel	2697	12	NA	NA	-15	0	intron_retention	FALSE	canonical	1	341651	junction_4	92578.91806323943	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	1591	2721	10.0	-2	True	AATAAA	-18
PB.2916.3	chr12	+	3805	10	novel_in_catalog	TRAFD1	novel	2697	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	341651	junction_4	96728.10645130153	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	1577	2581	10.0	-23	True	AATAAA	-18
PB.2916.2	chr12	+	1832	11	novel_not_in_catalog	TRAFD1	novel	2697	12	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	88	junction_10	152095.9460153031	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	97	1551	10.0	-25	True	AATAAA	-18
PB.2916.5	chr12	+	2939	11	novel_in_catalog	TRAFD1	novel	2697	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	341651	junction_4	92850.69436062392	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	93	1715	10.0	-21	True	AATAAA	-18
PB.2916.4	chr12	+	2699	12	novel_in_catalog	TRAFD1	novel	2697	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1894	junction_1	154723.24744363443	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	84	1883	5.0	-22	True	AATAAA	-22
PB.2916.7	chr12	+	2645	12	full-splice_match	TRAFD1	ENST00000412615.6	2697	12	46	6	2	0	multi-exon	FALSE	canonical	1	341651	junction_4	89493.5996289425	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	85	1833	10.0	-13	True	AATAAA	-18
PB.2916.6	chr12	+	2881	12	novel_not_in_catalog	TRAFD1	novel	2697	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1467	junction_1	154826.67218057875	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	321	2069	10.0	-15	True	AATAAA	-18
PB.11229.5	chr8	-	1399	6	full-splice_match	C8orf88	ENST00000517562.2	894	6	30	-535	30	535	multi-exon	FALSE	canonical	1	94794	junction_5	23365.958945440267	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	141	494	85.0	-11	True	ATTAAA	-36
PB.1204.1	chr1	+	3071	1	full-splice_match	MAP10	ENST00000418460.2	3516	1	455	-10	455	10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	905	2718	104	2821	30.0	-81	False	AATAAA	-27
PB.11535.1	chr9	+	1095	5	full-splice_match	CLTA	ENST00000345519.9	1073	5	-20	-2	-20	0	multi-exon	FALSE	canonical	1	1525257	junction_1	748032.8939040715	NA	0	NA	TRUE	NA	NA	NA	A	coding	218	657	155	811	25.0	1	True	AATAAA	-18
PB.476.1	chr1	+	3306	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	31	-83	1	83	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	2	NA	TRUE	NA	NA	NA	C	coding	594	1785	37	1821	85.0	-1	True	NA	NA
PB.818.7	chr1	+	2972	13	novel_in_catalog	SEMA4A	novel	1057	9	NA	NA	174	4	intron_retention	FALSE	canonical	1	4493	junction_3	64599.80366499232	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	35	2221	5.0	-3	True	ATTAAA	-18
PB.649.11	chr1	+	3626	27	novel_in_catalog	WDR3	novel	1035	10	NA	NA	3	-6487	combination_of_known_junctions	FALSE	canonical	1	76529	junction_1	84668.36925966058	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	187	3018	55.0	17	True	AATAAA	-17
PB.649.10	chr1	+	4009	27	novel_in_catalog	WDR3	novel	1035	10	NA	NA	-10	-6117	combination_of_known_junctions	FALSE	canonical	1	76529	junction_1	84668.36925966058	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	200	3031	25.0	4	True	NA	NA
PB.649.13	chr1	+	3228	22	incomplete-splice_match	WDR3	ENST00000349139.5	9974	27	9707	6122	9700	-6122	5prime_fragment	FALSE	canonical	1	303495	junction_6	57993.63020315757	NA	3	NA	TRUE	NA	NA	NA	C	coding	669	2010	246	2255	40.0	9479	False	NA	NA
PB.11370.2	chr8	-	2426	13	novel_in_catalog	TOP1MT	novel	892	4	NA	NA	-13	-3	intron_retention	FALSE	canonical	1	165461	junction_12	90390.1494788318	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	19	2067	40.0	0	True	ATTAAA	-23
PB.476.3	chr1	+	4699	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	28	-1473	0	1473	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	1	1824	40.0	-4	True	AATAAA	-21
PB.308.8	chr1	+	1773	5	full-splice_match	AKIRIN1	ENST00000432648.7	2741	5	52	916	-13	289	multi-exon	FALSE	canonical	1	346640	junction_1	174229.70502669027	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	107	685	60.0	-13	True	NA	NA
PB.476.2	chr1	+	3245	4	full-splice_match	FPGT	ENST00000467578.6	601	4	1	-2645	1	4	multi-exon	FALSE	canonical	1	12646	junction_2	50508.036801637376	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	502	1839	35.0	-5	True	NA	NA
PB.981.13	chr1	+	2490	16	full-splice_match	SMG7	ENST00000419169.5	2483	16	-5	-2	-3	2	multi-exon	FALSE	canonical	1	19346	junction_1	103438.475948556	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2271	219	2489	55.0	-10	True	NA	NA
PB.8851.1	chr4	-	2843	5	full-splice_match	SCD5	ENST00000319540.8	3101	5	257	1	172	-1	multi-exon	FALSE	canonical	1	332793	junction_4	52579.49717511095	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	64	1056	15.0	0	True	AATAAA	-14
PB.8851.2	chr4	-	2284	5	full-splice_match	SCD5	ENST00000319540.8	3101	5	31	786	31	-786	multi-exon	FALSE	canonical	1	332793	junction_4	52579.49717511095	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	290	1282	65.0	274	False	NA	NA
PB.10669.1	chr7	+	6219	21	novel_not_in_catalog	ANKIB1	novel	6081	20	NA	NA	-248	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	69407.38489330585	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	512	3781	20.0	-38	True	ATTAAA	-23
PB.10669.2	chr7	+	3924	20	full-splice_match	ANKIB1	ENST00000265742.7	6081	20	106	2051	106	-15	multi-exon	FALSE	canonical	1	179397	junction_1	40154.73521660664	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	271	3540	75.0	15	False	ACTAAA	-35
PB.10669.3	chr7	+	2417	15	incomplete-splice_match	ANKIB1	ENST00000265742.7	6081	20	-17	11296	-17	-7749	3prime_fragment	FALSE	canonical	1	179397	junction_1	43733.20778759383	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2022	394	2415	55.0	-6	True	NA	NA
PB.10669.4	chr7	+	6097	20	full-splice_match	ANKIB1	ENST00000265742.7	6081	20	-16	0	-16	0	multi-exon	FALSE	canonical	1	179397	junction_1	40154.73521660664	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	393	3662	20.0	-5	True	ATTAAA	-20
PB.476.7	chr1	+	3713	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	32	-491	0	491	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	36	1820	15.0	0	True	NA	NA
PB.11370.3	chr8	-	2053	15	full-splice_match	TOP1MT	ENST00000523676.5	1982	15	-57	-14	2	-3	multi-exon	FALSE	canonical	1	10065	junction_14	145146.05023800643	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	464	1975	40.0	27	True	ATTAAA	-23
PB.3275.12	chr13	+	2717	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	8833	junction_11	207636.64436957618	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	224	1372	30.0	-23	True	AATAAA	-18
PB.3275.13	chr13	+	2637	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-4	-3	any annotated donor/acceptor	FALSE	canonical	1	100555	junction_1	188280.553736498	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	217	1437	30.0	-16	True	AATAAA	-18
PB.3275.10	chr13	+	2496	11	novel_in_catalog	TFDP1	novel	804	7	NA	NA	10	-61	no_combination_of_known_junctions	FALSE	canonical	1	100555	junction_1	188747.37963521507	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	201	1214	20.0	0	True	AATAAA	-44
PB.3275.11	chr13	+	2585	11	novel_in_catalog	TFDP1	novel	804	7	NA	NA	3	-4	no_combination_of_known_junctions	FALSE	canonical	1	1505	junction_1	197178.4758125491	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	514	1386	25.0	-29	True	AATAAA	-17
PB.3275.16	chr13	+	2515	11	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	9	-3	any annotated donor/acceptor	FALSE	canonical	1	14886	junction_3	198970.74584129197	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	623	1315	30.0	-1	True	AATAAA	-18
PB.3275.17	chr13	+	4856	11	incomplete-splice_match	TFDP1	ENST00000375370.9	2648	12	12	3	10	-3	intron_retention	FALSE	canonical	1	100555	junction_1	194655.2239565124	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	201	1289	30.0	0	True	AATAAA	-18
PB.3275.14	chr13	+	2382	12	full-splice_match	TFDP1	ENST00000375370.9	2648	12	-4	270	-4	-270	multi-exon	FALSE	canonical	1	100555	junction_1	185711.75435021528	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	217	1449	35.0	-16	True	ATTAAA	-32
PB.3275.15	chr13	+	2456	11	novel_in_catalog	TFDP1	novel	804	7	NA	NA	0	-83	no_combination_of_known_junctions	FALSE	canonical	1	14886	junction_3	197707.6346783047	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	632	1336	45.0	-10	True	AATAAA	-22
PB.3275.18	chr13	+	2511	11	novel_in_catalog	TFDP1	novel	804	7	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	95028	junction_4	192557.88901667987	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	607	1311	30.0	0	True	AATAAA	-18
PB.3275.19	chr13	+	2636	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-262	-3	any annotated donor/acceptor	FALSE	canonical	1	7449	junction_1	197111.53459512786	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	204	1436	30.0	-415	False	AATAAA	-18
PB.11282.14	chr8	-	9840	59	novel_in_catalog	UBR5	novel	10297	59	NA	NA	28	-329	combination_of_known_junctions	FALSE	canonical	1	98900	junction_51	156236.74461675886	NA	1	NA	TRUE	NA	NA	NA	C	coding	2793	8382	498	8879	55.0	162	False	AATAAA	-24
PB.11370.4	chr8	-	2010	15	novel_in_catalog	TOP1MT	novel	892	4	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	8835	junction_14	143666.02323716145	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	421	1932	40.0	7	True	ATTAAA	-23
PB.4525.5	chr16	+	7402	18	incomplete-splice_match	PDPR	ENST00000568530.5	7223	19	229	21	229	-21	5prime_fragment	FALSE	canonical	1	1764	junction_13	73128.86126761156	NA	0	NA	TRUE	NA	NA	NA	B	coding	879	2640	363	3002	90.0	256	False	NA	NA
PB.4525.4	chr16	+	7262	18	novel_in_catalog	PDPR	novel	9255	19	NA	NA	-91	-19	intron_retention	FALSE	canonical	1	1764	junction_13	71836.41740090147	NA	4	NA	TRUE	NA	NA	NA	B	coding	879	2640	221	2860	95.0	-92	False	NA	NA
PB.4525.1	chr16	+	4215	18	novel_in_catalog	PDPR	novel	9255	19	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	1764	junction_13	71836.41740090147	NA	1	NA	TRUE	NA	NA	NA	B	coding	879	2640	128	2767	25.0	1	True	AATAAA	-25
PB.4525.3	chr16	+	4074	16	novel_in_catalog	PDPR	novel	9255	19	NA	NA	-98	-5	no_combination_of_known_junctions	FALSE	canonical	1	1764	junction_11	73924.14560585434	NA	0	NA	TRUE	NA	NA	NA	B	coding	799	2400	228	2627	25.0	13	True	AATAAA	-24
PB.4525.2	chr16	+	6930	16	novel_in_catalog	PDPR	novel	9255	19	NA	NA	2	-18	intron_retention	FALSE	canonical	1	1764	junction_11	73924.14560585434	NA	6	NA	TRUE	NA	NA	NA	B	coding	799	2400	128	2527	90.0	1	True	NA	NA
PB.1152.16	chr1	-	2293	14	novel_not_in_catalog	WDR26	novel	7367	14	NA	NA	1452	-1	any annotated donor/acceptor	FALSE	canonical	1	177	junction_13	267922.87866685836	NA	3	NA	TRUE	NA	NA	NA	B	coding	498	1497	99	1595	30.0	4646	False	AATAAA	-19
PB.1026.3	chr1	-	3435	18	incomplete-splice_match	KIF14	ENST00000367350.4	7274	30	-17	37852	-17	-37852	3prime_fragment	FALSE	canonical	1	30651	junction_17	28766.230640569436	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2979	457	3435	70.0	-1	True	TTTAAA	-20
PB.8509.11	chr3	-	2368	13	incomplete-splice_match	GOLIM4	ENST00000470487.5	4373	16	48	16316	48	-14758	3prime_fragment	FALSE	canonical	1	268882	junction_6	82656.79550792475	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1713	655	2367	70.0	-4	True	AAGAAA	-13
PB.1185.1	chr1	-	2765	3	novel_not_in_catalog	AL162595.1	novel	868	2	NA	NA	-14	5429	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7416.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	100	303	624	926	30.0	-1	True	NA	NA
PB.10094.2	chr6	+	1888	3	full-splice_match	SMIM8	ENST00000229570.9	2405	3	20	497	4	47	multi-exon	FALSE	canonical	1	66873	junction_1	46836.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	97	294	44	337	35.0	20	True	TTTAAA	-19
PB.10094.1	chr6	+	2414	3	full-splice_match	SMIM8	ENST00000229570.9	2405	3	-5	-4	0	-2	multi-exon	FALSE	canonical	1	66873	junction_1	46836.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	97	294	69	362	45.0	-5	True	AATAAA	-19
PB.152.24	chr1	-	1754	2	novel_not_in_catalog	USP48	novel	4309	26	NA	NA	70	-23299	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	14	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.1185.2	chr1	-	2800	3	novel_not_in_catalog	AL162595.1	novel	868	2	NA	NA	-143	5391	any annotated donor/acceptor	TRUE	canonical	1	392	junction_1	7220.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	100	303	753	1055	75.0	-130	False	NA	NA
PB.9571.5	chr5	-	2834	25	novel_in_catalog	ANXA6	novel	451	4	NA	NA	7	-30	intron_retention	FALSE	canonical	1	481592	junction_5	745557.4926041175	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	125	2128	70.0	0	True	NA	NA
PB.9571.4	chr5	-	2879	26	full-splice_match	ANXA6	ENST00000354546.9	2593	26	98	-384	1	-9	multi-exon	FALSE	canonical	1	1653387	junction_6	635394.5734788184	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	131	2152	50.0	-6	True	AATAAA	-12
PB.8629.12	chr3	-	2488	4	full-splice_match	NCBP2	ENST00000452404.6	1133	4	15	-1370	11	0	multi-exon	FALSE	canonical	1	44293	junction_3	470386.40290037676	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	468	884	0.0	704	False	AATAAA	-15
PB.5698.6	chr19	-	2564	14	novel_not_in_catalog	AC011511.4	novel	1850	8	NA	NA	-12851	-748	intron_retention	FALSE	non_canonical	0	0	junction_1	136148.17434401056	NA	2	1	TRUE	NA	NA	NA	B	coding	739	2220	23	2242	40.0	-1	True	ATTAAA	-21
PB.9571.1	chr5	-	4267	26	full-splice_match	ANXA6	ENST00000354546.9	2593	26	71	-1745	-26	1352	multi-exon	FALSE	canonical	1	1653387	junction_6	635394.5734788184	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	158	2179	5.0	-33	True	NA	NA
PB.9221.8	chr5	+	1630	2	incomplete-splice_match	PELO	ENST00000274311.2	4349	3	12151	2038	12138	174	5prime_fragment	FALSE	canonical	1	496796	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	385	1158	305	1462	70.0	-21	True	NA	NA
PB.9571.3	chr5	-	4080	25	novel_in_catalog	ANXA6	novel	451	4	NA	NA	2	1211	intron_retention	FALSE	canonical	1	481592	junction_5	745557.4926041175	NA	2	NA	TRUE	NA	NA	NA	C	coding	667	2004	130	2133	35.0	-5	True	GATAAA	-28
PB.9571.2	chr5	-	4127	26	full-splice_match	ANXA6	ENST00000354546.9	2593	26	71	-1605	-26	1212	multi-exon	FALSE	canonical	1	1653387	junction_6	635394.5734788184	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	158	2179	35.0	-33	True	GATAAA	-29
PB.9571.9	chr5	-	3718	25	novel_in_catalog	ANXA6	novel	451	4	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1653387	junction_6	647294.2084998692	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	1757	3379	35.0	6	True	AAAACA	-19
PB.9571.8	chr5	-	2478	26	full-splice_match	ANXA6	ENST00000354546.9	2593	26	109	6	-6	-2	multi-exon	FALSE	canonical	1	1653387	junction_6	635394.5734788184	NA	14	3	TRUE	NA	NA	NA	C	coding	673	2022	120	2141	30.0	5	True	AAAACA	-17
PB.10746.1	chr7	-	2132	5	full-splice_match	IFT22	ENST00000315322.8	1130	5	-37	-965	-17	3	multi-exon	FALSE	canonical	1	256540	junction_4	69336.50020191385	NA	2	NA	TRUE	NA	NA	NA	A	coding	185	558	132	689	20.0	-92	False	NA	NA
PB.1594.2	chr10	-	3173	12	novel_in_catalog	ERLIN1	novel	5792	11	NA	NA	47	-1	combination_of_known_junctions	FALSE	canonical	1	84437	junction_11	139029.0738524301	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	91	1137	10.0	74	False	AATAAA	-15
PB.1594.3	chr10	-	3102	11	novel_in_catalog	ERLIN1	novel	5792	11	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	13813	junction_4	169989.16357135825	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	79	591	10.0	0	True	AATAAA	-15
PB.5530.2	chr18	-	4613	3	novel_not_in_catalog	ZNF516	novel	8118	7	NA	NA	-743	-15463	any annotated donor/acceptor	FALSE	canonical	1	19805	junction_2	38354.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	1177	3534	258	3791	95.0	-12	True	NA	NA
PB.1594.1	chr10	-	3128	12	full-splice_match	ERLIN1	ENST00000407654.7	1453	12	4	-1679	0	-35	multi-exon	FALSE	canonical	1	172453	junction_11	121572.83957167678	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	80	1126	75.0	-1	True	NA	NA
PB.1594.4	chr10	-	2839	12	full-splice_match	ERLIN1	ENST00000407654.7	1453	12	-8	-1378	-8	-336	multi-exon	FALSE	canonical	1	172453	junction_11	121572.83957167678	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	92	1138	30.0	15	False	AATAAA	-25
PB.1594.5	chr10	-	3508	2	novel_in_catalog	ERLIN1	novel	5792	11	NA	NA	-11	-27353	intron_retention	FALSE	canonical	1	172453	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	12	False	NA	NA
PB.10675.7	chr7	-	9033	3	incomplete-splice_match	SAMD9L	ENST00000318238.8	7134	5	-12	2	-11	-2	intron_retention	FALSE	canonical	1	122376	junction_2	17261.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	1584	4755	3119	7873	15.0	-12	True	AATAAA	-19
PB.10675.6	chr7	-	7144	5	full-splice_match	SAMD9L	ENST00000318238.8	7134	5	-12	2	-11	-2	multi-exon	FALSE	canonical	1	72731	junction_3	35372.654108611925	NA	3	NA	TRUE	NA	NA	NA	C	coding	1584	4755	1230	5984	15.0	-12	True	AATAAA	-19
PB.818.3	chr1	+	3384	16	novel_not_in_catalog	SEMA4A	novel	1057	9	NA	NA	-39	3	intron_retention	FALSE	canonical	1	135	junction_1	75645.4220897001	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	349	2634	10.0	0	True	ATTAAA	-17
PB.10675.2	chr7	-	6775	6	full-splice_match	SAMD9L	ENST00000437805.5	5757	6	-40	-978	-16	0	multi-exon	FALSE	canonical	1	37328	junction_3	42014.129164365644	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4755	859	5613	20.0	-17	True	AATAAA	-21
PB.10675.1	chr7	-	6940	5	full-splice_match	SAMD9L	ENST00000446033.1	1198	5	-34	-5708	-10	0	multi-exon	FALSE	canonical	1	39118	junction_3	45050.83562765512	NA	0	NA	TRUE	NA	NA	NA	C	coding	1584	4755	1024	5778	20.0	-11	True	AATAAA	-21
PB.9543.1	chr5	-	4713	32	full-splice_match	LARS	ENST00000394434.6	4766	32	30	23	-5	-23	multi-exon	FALSE	canonical	1	407291	junction_27	224158.19093806596	NA	2	NA	TRUE	NA	NA	NA	C	coding	1176	3531	138	3668	40.0	19	True	NA	NA
PB.1258.1	chr1	+	2299	4	novel_not_in_catalog	ZNF672	novel	555	4	NA	NA	14	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	140351.72078349767	NA	1	1	TRUE	NA	NA	NA	C	coding	311	936	480	1415	15.0	-24	True	AATAAA	-18
PB.8603.9	chr3	-	2512	1	incomplete-splice_match	ATP13A3	ENST00000439040.5	7720	33	93173	8	7872	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	5873	False	AATAAA	-15
PB.10906.14	chr7	-	3076	20	novel_not_in_catalog	EZH2	novel	3641	19	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	31710	junction_8	143054.55337530226	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	166	1662	20.0	-31	True	AATAAA	-17
PB.10906.15	chr7	-	2603	20	full-splice_match	EZH2	ENST00000460911.5	2591	20	-11	-1	-8	0	multi-exon	FALSE	canonical	1	114685	junction_19	122837.47945590683	NA	1	NA	TRUE	NA	NA	NA	C	coding	746	2241	101	2341	20.0	98	False	AATAAA	-17
PB.10906.16	chr7	-	2467	19	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	12861	junction_9	144492.6696602826	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	135	1367	20.0	0	True	AATAAA	-17
PB.10906.17	chr7	-	2662	20	full-splice_match	EZH2	ENST00000320356.6	2639	20	-23	0	-14	0	multi-exon	FALSE	canonical	1	16925	junction_12	142877.9149945157	NA	3	NA	TRUE	NA	NA	NA	C	coding	751	2256	146	2401	15.0	-11	True	AATAAA	-16
PB.10906.10	chr7	-	2777	21	novel_not_in_catalog	EZH2	novel	3641	19	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	1839	junction_5	158025.82717469794	NA	1	NA	TRUE	NA	NA	NA	C	coding	695	2088	135	2222	20.0	0	True	AATAAA	-18
PB.10906.11	chr7	-	2532	19	full-splice_match	EZH2	ENST00000350995.6	2477	19	-53	-2	-14	0	multi-exon	FALSE	canonical	1	32044	junction_16	137343.16051459895	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	146	2269	20.0	-11	True	AATAAA	-18
PB.10906.12	chr7	-	3717	19	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-3	0	intron_retention	FALSE	canonical	1	4938	junction_16	157882.89537357492	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	614	1582	20.0	0	True	AATAAA	-17
PB.10906.13	chr7	-	3100	21	novel_not_in_catalog	EZH2	novel	3641	19	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	31710	junction_8	171627.31690016598	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	135	1112	20.0	0	True	AATAAA	-17
PB.5517.1	chr18	-	4732	16	full-splice_match	TMX3	ENST00000299608.6	4927	16	194	1	-12	-1	multi-exon	FALSE	canonical	1	211080	junction_15	50988.8203001403	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	124	1488	15.0	-40	True	AATAAA	-18
PB.5517.3	chr18	-	4625	15	novel_in_catalog	TMX3	novel	4927	16	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	9218	junction_10	89536.78333286794	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	100	1383	20.0	-16	True	AATAAA	-16
PB.5517.5	chr18	-	3681	16	full-splice_match	TMX3	ENST00000299608.6	4927	16	202	1044	-4	-1044	multi-exon	FALSE	canonical	1	211080	junction_15	50988.8203001403	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	116	1480	20.0	-32	True	ATTAAA	-19
PB.5517.4	chr18	-	4302	19	novel_not_in_catalog	TMX3	novel	4927	16	NA	NA	-27	-1044	any annotated donor/acceptor	FALSE	canonical	1	1195	junction_14	141200.67964106536	NA	9	2	TRUE	NA	NA	NA	C	coding	221	666	1436	2101	20.0	-55	True	ATTAAA	-19
PB.5517.7	chr18	-	3602	15	full-splice_match	TMX3	ENST00000564631.5	1509	15	13	-2106	1	-1045	multi-exon	FALSE	canonical	1	14650	junction_11	89547.41906580524	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	461	1402	20.0	0	True	ATTAAA	-18
PB.5517.6	chr18	-	4174	17	novel_not_in_catalog	TMX3	novel	4927	16	NA	NA	2	-1045	any annotated donor/acceptor	FALSE	canonical	1	5861	junction_8	108882.85322636821	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	1309	1974	20.0	-11	True	ATTAAA	-18
PB.5517.9	chr18	-	2322	16	full-splice_match	TMX3	ENST00000299608.6	4927	16	218	2387	-3	635	multi-exon	FALSE	canonical	1	211080	junction_15	50988.8203001403	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	100	1464	40.0	-16	True	NA	NA
PB.11712.16	chr9	+	3870	4	full-splice_match	AKAP2	ENST00000259318.7	3101	4	-1	-768	-1	-330	multi-exon	FALSE	canonical	1	30860	junction_1	158268.51259173444	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	209	2788	50.0	-13	True	AAGAAA	-13
PB.11712.17	chr9	+	2940	4	full-splice_match	AKAP2	ENST00000259318.7	3101	4	-3	164	-3	14	multi-exon	FALSE	canonical	1	30860	junction_1	158268.51259173444	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	211	2790	65.0	-15	True	AATATA	-9
PB.11712.14	chr9	+	3777	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	345057	-231	no_combination_of_known_junctions	FALSE	canonical	1	30860	junction_1	93093.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	774	2325	196	2520	70.0	0	True	NA	NA
PB.11712.15	chr9	+	6579	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	345059	-30	no_combination_of_known_junctions	FALSE	canonical	1	30860	junction_1	93093.5	NA	7	NA	TRUE	NA	NA	NA	B	coding	774	2325	194	2518	35.0	2	True	NA	NA
PB.4539.2	chr16	-	2114	9	full-splice_match	ZNF821	ENST00000568666.5	1719	9	-32	-363	0	1	multi-exon	FALSE	canonical	1	6050	junction_7	31350.706204167076	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	542	1780	0.0	-11	True	AATAAA	-17
PB.4539.3	chr16	-	2003	8	novel_in_catalog	ZNF821	novel	1954	8	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	37296	junction_4	17781.137001362553	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	883	1671	5.0	-1	True	AATAAA	-15
PB.11712.10	chr9	+	3853	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	268240	-231	no_combination_of_known_junctions	FALSE	canonical	1	136664	junction_1	40191.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	863	2592	5	2596	70.0	0	True	NA	NA
PB.4539.1	chr16	-	2071	8	full-splice_match	ZNF821	ENST00000425432.5	2000	8	-71	0	-57	0	multi-exon	FALSE	canonical	1	51687	junction_4	14306.323405674679	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	495	1733	5.0	-82	False	AATAAA	-21
PB.5061.3	chr17	-	1702	4	full-splice_match	ARL17A	ENST00000336125.5	3945	4	-7	2250	-7	959	multi-exon	FALSE	canonical	1	514	junction_1	249.99244433026817	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	107	640	10.0	NA	False	NA	NA
PB.5061.2	chr17	-	2749	5	novel_not_in_catalog	ARL17A	novel	798	5	NA	NA	0	-224	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	432.87490976031404	NA	5	NA	TRUE	NA	NA	NA	C	coding	177	534	88	621	25.0	NA	False	AATAAA	-23
PB.5061.1	chr17	-	2399	5	novel_not_in_catalog	ARL17A	novel	798	5	NA	NA	-6	1594	any annotated donor/acceptor	FALSE	canonical	1	11	junction_1	428.75692414233964	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	106	696	40.0	NA	False	AATAAA	-21
PB.9438.2	chr5	+	2763	4	full-splice_match	C5orf56	ENST00000612967.2	2791	4	25	3	25	-3	multi-exon	FALSE	canonical	1	3836	junction_3	59061.62614309452	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	212	661	25.0	16	True	NA	NA
PB.11712.18	chr9	+	2761	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	345042	-1262	no_combination_of_known_junctions	FALSE	canonical	1	30860	junction_1	93093.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	774	2325	211	2535	65.0	-15	True	AATATA	-9
PB.11712.19	chr9	+	4317	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	345044	296	no_combination_of_known_junctions	FALSE	canonical	1	30860	junction_1	93093.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	774	2325	209	2533	80.0	-13	True	NA	NA
PB.5983.2	chr19	-	2219	5	incomplete-splice_match	FBXO17	ENST00000292852.8	2386	6	174	2210	-34	-929	3prime_fragment	FALSE	canonical	1	63481	junction_4	46840.54214233114	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	169	876	70.0	-30	True	NA	NA
PB.8563.30	chr3	+	5216	31	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	4514	junction_1	740294.1553538897	NA	0	NA	TRUE	NA	NA	NA	C	coding	1560	4683	85	4767	10.0	14	True	ATTAAA	-20
PB.8563.33	chr3	+	3313	18	incomplete-splice_match	EIF4G1	ENST00000346169.6	5516	33	659	10054	-10	0	internal_fragment	FALSE	canonical	1	494397	junction_2	700956.8054948192	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2886	427	3312	70.0	-12	True	NA	NA
PB.5983.1	chr19	-	1330	6	full-splice_match	FBXO17	ENST00000292852.8	2386	6	175	881	-33	-4	multi-exon	TRUE	canonical	1	63481	junction_5	44803.312589137866	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	168	1004	90.0	-29	True	NA	NA
PB.11850.25	chr9	-	5094	14	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	4880	junction_9	312088.82771897793	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	192	1742	10.0	0	True	AATAAA	-13
PB.12015.9	chrX	+	3652	20	novel_not_in_catalog	GK	novel	3638	20	NA	NA	-53	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	8388.45525516272	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	927	1787	25.0	2	True	AATAAA	-17
PB.12015.8	chrX	+	3311	20	full-splice_match	GK	ENST00000378943.7	3707	20	65	331	-54	-331	multi-exon	FALSE	canonical	1	59	junction_18	8380.903751040845	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	115	1776	30.0	1	True	TATAAA	-19
PB.11240.10	chr8	-	5394	2	full-splice_match	FSBP	ENST00000481490.2	1158	2	-2	-4234	-2	4234	multi-exon	FALSE	canonical	1	29054	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	77	976	10.0	-9	True	AATACA	-19
PB.8955.1	chr4	+	3236	16	novel_in_catalog	USP53	novel	4233	2	NA	NA	-9	-3402	no_combination_of_known_junctions	FALSE	canonical	1	56525	junction_2	42502.87832794386	NA	0	NA	TRUE	NA	NA	NA	B	coding	774	2322	914	3235	60.0	-1	True	TATAAA	-32
PB.12015.1	chrX	+	3480	19	full-splice_match	GK	ENST00000378945.7	2063	19	20	-1437	2	-1	multi-exon	FALSE	canonical	1	98	junction_12	24324.359647782945	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	41	1615	25.0	-6212	False	AATAAA	-17
PB.12015.3	chrX	+	3834	20	full-splice_match	GK	ENST00000378943.7	3707	20	56	-183	56	183	multi-exon	FALSE	canonical	1	59	junction_18	8380.903751040845	NA	1	1	TRUE	NA	NA	NA	C	coding	553	1662	124	1785	70.0	-8	True	NA	NA
PB.12015.2	chrX	+	2500	20	full-splice_match	GK	ENST00000378943.7	3707	20	18	1189	18	170	multi-exon	TRUE	canonical	1	59	junction_18	8380.903751040845	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	162	1823	5.0	-6333	False	NA	NA
PB.12015.5	chrX	+	1853	20	full-splice_match	GK	ENST00000378943.7	3707	20	159	1695	11	-257	multi-exon	FALSE	canonical	1	59	junction_18	8380.903751040845	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	21	1682	60.0	-6192	False	AATAAA	-12
PB.12015.4	chrX	+	2342	20	full-splice_match	GK	ENST00000378943.7	3707	20	56	1309	56	50	multi-exon	FALSE	canonical	1	59	junction_18	8380.903751040845	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	124	1785	20.0	-8	True	ATTAAA	-20
PB.12015.7	chrX	+	2556	18	novel_in_catalog	GK	novel	3638	20	NA	NA	-55	456	combination_of_known_junctions	FALSE	canonical	1	27	junction_3	8492.694617641217	NA	18	3	TRUE	NA	NA	NA	C	coding	348	1047	547	1593	30.0	0	True	AATAAA	-14
PB.12015.6	chrX	+	2646	20	full-splice_match	GK	ENST00000378943.7	3707	20	158	903	10	456	multi-exon	FALSE	canonical	1	59	junction_18	8380.903751040845	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	22	1683	30.0	-6193	False	AATAAA	-14
PB.8955.3	chr4	+	2891	14	novel_in_catalog	USP53	novel	4233	2	NA	NA	-8	486	no_combination_of_known_junctions	FALSE	canonical	1	56525	junction_2	35645.69591585278	NA	2	NA	TRUE	NA	NA	NA	B	coding	659	1977	913	2889	65.0	0	True	AATGAA	-40
PB.766.5	chr1	+	4730	29	novel_in_catalog	INTS3	novel	5235	30	NA	NA	-16	0	intron_retention	FALSE	canonical	1	325249	junction_1	127208.95885412316	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	1294	3921	5.0	1	True	AATAAA	-16
PB.8282.2	chr3	+	2737	2	full-splice_match	DUBR	ENST00000466734.5	2737	2	0	0	0	0	multi-exon	FALSE	canonical	1	38165	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	19	60	412	471	75.0	0	True	NA	NA
PB.11544.3	chr9	+	1219	9	full-splice_match	GRHPR	ENST00000460882.5	1080	9	2	-141	2	0	multi-exon	FALSE	canonical	1	247733	junction_1	559263.1691283071	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	266	1012	25.0	0	True	ATTAAA	-13
PB.8282.1	chr3	+	3300	2	full-splice_match	DUBR	ENST00000466734.5	2737	2	-1	-562	-1	562	multi-exon	FALSE	canonical	1	38165	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	19	60	413	472	30.0	-1	True	NA	NA
PB.11544.2	chr9	+	1581	9	novel_not_in_catalog	GRHPR	novel	1136	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	26136	junction_5	735560.1032892808	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	268	696	25.0	-2	True	ATTAAA	-13
PB.10062.14	chr6	-	2131	7	novel_in_catalog	EEF1A1	novel	4441	7	NA	NA	26	-1	intron_retention	FALSE	canonical	1	17797	junction_4	6752946.479304242	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	597	1841	20.0	7	True	ATTAAA	-12
PB.10062.17	chr6	-	1628	9	novel_not_in_catalog	EEF1A1	novel	4441	7	NA	NA	1	-13	intron_retention	FALSE	non_canonical	0	0	junction_5	6031179.690872993	NA	2	1	TRUE	NA	NA	NA	C	coding	429	1290	63	1352	65.0	-7	True	NA	NA
PB.10062.11	chr6	-	2080	8	novel_in_catalog	EEF1A1	novel	4441	7	NA	NA	-18	1	intron_retention	FALSE	canonical	1	17797	junction_4	6375184.978979859	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	400	1788	15.0	3106	False	ATTAAA	-14
PB.10062.10	chr6	-	1728	8	full-splice_match	EEF1A1	ENST00000309268.10	2303	8	556	19	0	-13	multi-exon	FALSE	canonical	1	17797	junction_4	6356073.130477156	NA	4	1	TRUE	NA	NA	NA	C	coding	462	1389	64	1452	65.0	-8	True	NA	NA
PB.10062.13	chr6	-	1844	8	novel_not_in_catalog	EEF1A1	novel	4441	7	NA	NA	-61	0	intron_retention	FALSE	canonical	1	9646	junction_7	6375986.332091181	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	165	1553	15.0	-22	True	ATTAAA	-13
PB.10062.12	chr6	-	1638	9	novel_not_in_catalog	EEF1A1	novel	4441	7	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_5	6031179.690872993	NA	2	1	TRUE	NA	NA	NA	C	coding	262	789	558	1346	15.0	-8	True	ATTAAA	-14
PB.5507.1	chr18	+	3494	10	incomplete-splice_match	PHLPP1	ENST00000262719.9	6390	17	189799	-10	-1038	10	5prime_fragment	FALSE	canonical	1	113345	junction_8	82685.86412545279	NA	32	1	TRUE	NA	NA	NA	A	coding	819	2460	23	2482	10.0	0	True	AATAAA	-28
PB.2401.4	chr12	+	3205	7	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	47440	-47204	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	114088.22546462306	NA	3	NA	TRUE	NA	NA	NA	B	coding	270	813	71	883	90.0	-3494	False	NA	NA
PB.2401.5	chr12	+	2196	7	novel_not_in_catalog	AC008012.1	novel	3435	12	NA	NA	47453	-47203	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	114088.22546462306	NA	2	NA	TRUE	NA	NA	NA	B	coding	270	813	58	870	95.0	2	True	NA	NA
PB.2401.6	chr12	+	1368	6	full-splice_match	TIGAR	ENST00000179259.5	2782	6	19	1395	19	842	multi-exon	FALSE	canonical	1	207073	junction_1	53748.299182764844	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	49	861	40.0	11	True	NA	NA
PB.12001.1	chrX	+	957	7	full-splice_match	PRDX4	ENST00000379341.8	1005	7	47	1	-6	-1	multi-exon	FALSE	canonical	1	719977	junction_6	521167.4356303889	NA	0	NA	TRUE	NA	NA	NA	A	coding	271	816	79	894	25.0	-31	True	AATAAA	-21
PB.2401.1	chr12	+	2492	6	full-splice_match	TIGAR	ENST00000179259.5	2782	6	-11	301	-11	-257	multi-exon	FALSE	canonical	1	207073	junction_1	53748.299182764844	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	79	891	70.0	-3502	False	AATAAA	-7
PB.2401.2	chr12	+	1886	6	full-splice_match	TIGAR	ENST00000179259.5	2782	6	-11	907	-11	-863	multi-exon	FALSE	canonical	1	207073	junction_1	53748.299182764844	NA	2	NA	TRUE	NA	NA	NA	C	coding	270	813	79	891	20.0	-3502	False	NA	NA
PB.2401.3	chr12	+	2787	6	full-splice_match	TIGAR	ENST00000179259.5	2782	6	-6	1	-6	-1	multi-exon	FALSE	canonical	1	207073	junction_1	53748.299182764844	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	74	886	20.0	-3497	False	AATAAA	-29
PB.10353.10	chr7	+	4285	22	novel_in_catalog	SUN1	novel	520	4	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	55607	junction_8	179356.90784511098	NA	1	NA	TRUE	NA	NA	NA	B	coding	879	2640	74	2713	40.0	-22	True	AATAAA	-23
PB.10353.11	chr7	+	4013	20	novel_in_catalog	SUN1	novel	520	4	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	27364	junction_6	185230.1003219653	NA	1	NA	TRUE	NA	NA	NA	B	coding	785	2358	74	2431	20.0	-22	True	AATAAA	-33
PB.10353.12	chr7	+	5521	20	novel_in_catalog	SUN1	novel	520	4	NA	NA	-2	0	intron_retention	FALSE	canonical	1	59823	junction_1	181246.7468667768	NA	1	NA	TRUE	NA	NA	NA	B	coding	460	1383	2568	3950	40.0	-22	True	AATAAA	-22
PB.10353.13	chr7	+	4845	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	8	1	intron_retention	FALSE	canonical	1	272684	junction_1	146579.41791209127	NA	4	NA	TRUE	NA	NA	NA	B	coding	460	1383	1893	3275	35.0	-12	True	AATAAA	-21
PB.7433.8	chr20	+	3332	6	novel_not_in_catalog	PCMTD2	novel	1049	6	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	3541	junction_5	196523.58982615802	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	202	963	25.0	0	True	AATAAA	-12
PB.5635.16	chr19	+	3774	11	incomplete-splice_match	KDM4B	ENST00000589104.5	3470	17	61085	-1671	-3833	0	5prime_fragment	FALSE	canonical	1	134255	junction_8	61168.125798981295	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	212	1690	20.0	-466	False	ATTAAA	-18
PB.10353.16	chr7	+	4698	22	novel_in_catalog	SUN1	novel	520	4	NA	NA	-6	0	intron_retention	FALSE	canonical	1	272684	junction_1	150769.07158730217	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1383	1745	3127	40.0	-6	True	AATAAA	-22
PB.10353.17	chr7	+	4469	23	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	3944	junction_8	187554.3142944319	NA	1	1	TRUE	NA	NA	NA	B	coding	460	1383	1516	2898	40.0	-5	True	AATAAA	-22
PB.1141.1	chr1	-	3773	10	full-splice_match	AIDA	ENST00000340020.10	3008	10	19	-784	19	784	multi-exon	FALSE	canonical	1	183	junction_2	7984.94440405207	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	189	1109	25.0	-32	True	ATTAAA	-27
PB.1141.2	chr1	-	2824	10	full-splice_match	AIDA	ENST00000340020.10	3008	10	182	2	-79	-2	multi-exon	FALSE	canonical	1	183	junction_2	7984.94440405207	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	26	946	35.0	889	False	ATTAAA	-14
PB.1141.3	chr1	-	2899	9	novel_in_catalog	AIDA	novel	3008	10	NA	NA	-45	-3	no_combination_of_known_junctions	FALSE	canonical	1	183	junction_2	8472.777303480541	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	360	1022	30.0	0	True	ATTAAA	-13
PB.1141.4	chr1	-	2764	9	novel_in_catalog	AIDA	novel	3008	10	NA	NA	42	-147	no_combination_of_known_junctions	FALSE	canonical	1	183	junction_2	8472.777303480541	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	369	1031	15.0	-9	True	ATTAAA	-15
PB.1141.5	chr1	-	2787	10	full-splice_match	AIDA	ENST00000340020.10	3008	10	34	187	34	-187	multi-exon	FALSE	canonical	1	183	junction_2	7984.94440405207	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	174	1094	55.0	-17	True	NA	NA
PB.1141.6	chr1	-	2491	10	full-splice_match	AIDA	ENST00000340020.10	3008	10	51	466	-45	-466	multi-exon	FALSE	canonical	1	183	junction_2	7984.94440405207	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	157	1077	25.0	0	True	AATAAA	-23
PB.1141.7	chr1	-	2185	10	full-splice_match	AIDA	ENST00000340020.10	3008	10	35	788	35	598	multi-exon	FALSE	canonical	1	183	junction_2	7984.94440405207	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	173	1093	30.0	-16	True	AATAAA	-14
PB.11537.1	chr9	-	4861	10	novel_in_catalog	RNF38	novel	5012	12	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	898	junction_9	89135.81578789101	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	507	1505	10.0	26	True	AATAAA	-25
PB.12249.1	chrX	+	897	6	full-splice_match	MCTS1	ENST00000371317.9	1018	6	32	89	32	2	multi-exon	FALSE	canonical	1	439224	junction_5	145839.7871591974	NA	1	NA	TRUE	NA	NA	NA	A	coding	181	546	226	771	30.0	-790	False	AATAAA	-21
PB.10667.4	chr7	-	2946	10	full-splice_match	CYP51A1	ENST00000450723.5	1729	10	36	-1253	36	-8	multi-exon	FALSE	canonical	1	14694	junction_4	46296.562060985336	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	226	1440	45.0	13	True	ATTAAA	-11
PB.10667.5	chr7	-	2881	8	novel_in_catalog	CYP51A1	novel	3210	10	NA	NA	56	-8	no_combination_of_known_junctions	FALSE	canonical	1	1559	junction_1	84360.84877549805	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	111	1310	45.0	-1	True	ATTAAA	-11
PB.10667.2	chr7	-	2973	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	228	9	228	-9	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	8	1468	45.0	8649	False	ATTAAA	-10
PB.10667.3	chr7	-	3097	9	novel_in_catalog	CYP51A1	novel	3210	10	NA	NA	9	-8	intron_retention	FALSE	canonical	1	3876	junction_2	78773.32867941012	NA	3	NA	TRUE	NA	NA	NA	C	coding	477	1434	158	1591	45.0	8430	False	ATTAAA	-11
PB.10667.1	chr7	-	3840	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	56	-686	56	686	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	3	NA	TRUE	NA	NA	NA	C	coding	509	1530	111	1640	65.0	-1	True	NA	NA
PB.10667.8	chr7	-	3052	11	novel_not_in_catalog	CYP51A1	novel	3210	10	NA	NA	61	-9	intron_retention	FALSE	canonical	1	30	junction_10	76029.07733992304	NA	3	1	TRUE	NA	NA	NA	C	coding	404	1215	333	1547	45.0	4	True	ATTAAA	-10
PB.10667.9	chr7	-	2610	8	novel_not_in_catalog	CYP51A1	novel	3210	10	NA	NA	-5065	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	48845.35174969079	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	17	1105	45.0	5893	False	ATTAAA	-10
PB.11119.1	chr8	+	1484	7	novel_in_catalog	AC110275.1	novel	623	6	NA	NA	37876	8446	intron_retention	FALSE	canonical	1	19674	junction_1	178813.1190698049	NA	0	NA	TRUE	NA	NA	NA	B	coding	312	939	48	986	55.0	-6807	False	AATAAA	-16
PB.11119.3	chr8	+	4555	7	novel_in_catalog	AC110275.1	novel	623	6	NA	NA	37881	8445	intron_retention	FALSE	canonical	1	19674	junction_1	191275.97737823744	NA	2	NA	TRUE	NA	NA	NA	B	coding	238	717	43	759	55.0	-6802	False	AATAAA	-15
PB.11119.2	chr8	+	4694	8	novel_in_catalog	AC110275.1	novel	623	6	NA	NA	37881	8446	intron_retention	FALSE	canonical	1	369	junction_6	167817.74534103042	NA	1	NA	TRUE	NA	NA	NA	B	coding	305	918	43	960	55.0	-6802	False	AATAAA	-16
PB.11119.5	chr8	+	4512	9	novel_not_in_catalog	AC110275.1	novel	623	6	NA	NA	37894	8446	intron_retention	FALSE	canonical	1	646	junction_6	157157.78870289685	NA	1	NA	TRUE	NA	NA	NA	B	coding	305	918	30	947	55.0	-5	True	AATAAA	-16
PB.11119.4	chr8	+	4753	9	novel_in_catalog	AC110275.1	novel	623	6	NA	NA	37886	8447	intron_retention	FALSE	canonical	1	52839	junction_6	147119.52777907322	NA	1	NA	TRUE	NA	NA	NA	B	coding	305	918	38	955	50.0	-6797	False	AATAAA	-17
PB.10904.10	chr7	+	2677	21	novel_in_catalog	CUL1	novel	2857	22	NA	NA	54	-21	intron_retention	FALSE	canonical	1	62	junction_1	173345.73670998515	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	255	2255	70.0	10	True	NA	NA
PB.10904.11	chr7	+	2690	21	incomplete-splice_match	CUL1	ENST00000325222.8	3064	22	31304	2	217	-2	5prime_fragment	FALSE	canonical	1	291007	junction_7	127640.88090195673	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	16	2238	15.0	NA	False	AATAAA	-23
PB.11119.9	chr8	+	1545	8	full-splice_match	FNTA	ENST00000533383.5	982	8	23	-586	-2	-1	multi-exon	FALSE	canonical	1	21434	junction_1	165194.61159184217	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	182	1048	55.0	-6754	False	AATAAA	-15
PB.11119.8	chr8	+	4656	8	full-splice_match	FNTA	ENST00000526755.5	4676	8	18	2	-2	-2	multi-exon	FALSE	canonical	1	21434	junction_1	177406.98777726904	NA	3	NA	TRUE	NA	NA	NA	C	coding	214	645	209	853	35.0	3	True	AATAAA	-22
PB.7095.3	chr2	+	6780	6	novel_not_in_catalog	ASB1	novel	569	4	NA	NA	5	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	91061.37230549516	NA	2	1	TRUE	NA	NA	NA	C	coding	96	291	785	1075	5.0	-44	True	AATAAA	-23
PB.6405.4	chr2	+	2742	19	novel_in_catalog	TTC27	novel	509	4	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	12914	junction_13	57840.98986997792	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	200	2632	20.0	-2	True	AATAAA	-15
PB.2356.2	chr11	-	1580	4	full-splice_match	PUS3	ENST00000227474.7	1843	4	14	249	14	-249	multi-exon	FALSE	canonical	1	27555	junction_3	47920.9369018966	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	85	1530	85.0	-2	True	NA	NA
PB.2356.1	chr11	-	1833	4	full-splice_match	PUS3	ENST00000227474.7	1843	4	14	-4	14	3	multi-exon	FALSE	canonical	1	27555	junction_3	47920.9369018966	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	85	1530	5.0	-2	True	ATTAAA	-21
PB.6405.1	chr2	+	2658	20	novel_in_catalog	TTC27	novel	509	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	3690	junction_1	58255.74116911941	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	165	2546	15.0	-18	True	AATAAA	-17
PB.6405.2	chr2	+	2528	10	novel_not_in_catalog	TTC27	novel	509	4	NA	NA	3	-18796	any annotated donor/acceptor	FALSE	canonical	1	2836	junction_9	66526.25964475222	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	259	1482	25.0	-15	True	NA	NA
PB.6405.3	chr2	+	2728	19	novel_in_catalog	TTC27	novel	509	4	NA	NA	-10	-1	no_combination_of_known_junctions	FALSE	canonical	1	7376	junction_11	59369.68344553337	NA	12	3	TRUE	NA	NA	NA	C	coding	802	2409	208	2616	15.0	-10	True	AATAAA	-17
PB.5597.1	chr19	-	3745	11	novel_in_catalog	SGTA	novel	2330	12	NA	NA	-31	-1	intron_retention	FALSE	canonical	1	534626	junction_10	189898.22823280896	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	105	845	5.0	13	True	AATAAA	-17
PB.5597.2	chr19	-	2232	12	full-splice_match	SGTA	ENST00000221566.6	2330	12	97	1	-4	-1	multi-exon	FALSE	canonical	1	534626	junction_11	181124.09726697564	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	66	1007	5.0	-2	True	AATAAA	-17
PB.5597.4	chr19	-	2431	13	novel_not_in_catalog	SGTA	novel	2330	12	NA	NA	-14	-6	any annotated donor/acceptor	FALSE	canonical	1	6257	junction_12	396417.070070664	NA	1	1	TRUE	NA	NA	NA	C	coding	299	900	312	1211	5.0	-24	True	AATAAA	-12
PB.4916.1	chr17	+	1783	1	full-splice_match	CCL4	ENST00000613947.1	1774	1	-12	3	2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-3	True	AATAAA	-16
PB.6458.3	chr2	+	4329	11	novel_not_in_catalog	MSH6	novel	833	4	NA	NA	5	2	intron_retention	FALSE	canonical	1	8845	junction_10	301300.6222283817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1360	4083	102	4184	50.0	-7956	False	AATAAA	-19
PB.4622.5	chr16	+	2480	10	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	1	intron_retention	FALSE	canonical	1	67658	junction_1	149930.33066489233	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	172	543	25.0	-11	True	GATAAA	-17
PB.4622.4	chr16	+	1842	13	novel_in_catalog	CDK10	novel	3344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	11223	junction_9	177680.91003389258	NA	3	NA	TRUE	NA	NA	NA	C	coding	321	966	216	1181	20.0	-20	True	GATAAA	-15
PB.11994.2	chrX	+	2550	11	full-splice_match	PDHA1	ENST00000422285.6	3310	11	16	744	-1	-744	multi-exon	FALSE	canonical	1	647730	junction_1	332088.34896448866	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	90	1262	20.0	-1	True	AATAAA	-15
PB.11994.3	chrX	+	5255	8	novel_in_catalog	PDHA1	novel	3277	10	NA	NA	-9	10	intron_retention	FALSE	canonical	1	647730	junction_1	367252.5782267622	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	4509	5054	40.0	-37	True	ATTAAA	-28
PB.11994.4	chrX	+	4986	10	novel_in_catalog	PDHA1	novel	3277	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	647730	junction_1	350021.2766320229	NA	2	NA	TRUE	NA	NA	NA	C	coding	282	849	2109	2957	50.0	-22	True	AATAAA	-15
PB.11994.5	chrX	+	3296	11	full-splice_match	PDHA1	ENST00000422285.6	3310	11	10	4	-7	-4	multi-exon	FALSE	canonical	1	647730	junction_1	332088.34896448866	NA	110	6	TRUE	NA	NA	NA	C	coding	390	1173	96	1268	50.0	-7	True	AATAAA	-14
PB.11994.6	chrX	+	3563	9	novel_in_catalog	PDHA1	novel	3277	10	NA	NA	0	9	intron_retention	FALSE	canonical	1	647730	junction_1	344021.51919536135	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	2818	3363	35.0	-20	True	ATTAAA	-27
PB.11994.7	chrX	+	3228	10	full-splice_match	PDHA1	ENST00000540249.5	3277	10	37	12	0	8	multi-exon	FALSE	canonical	1	27969	junction_5	502919.14985128155	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	118	1188	55.0	-20	True	AATAAA	-26
PB.11994.8	chrX	+	3156	10	novel_in_catalog	PDHA1	novel	3277	10	NA	NA	0	10	intron_retention	FALSE	canonical	1	647730	junction_1	350021.2766320229	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	2107	2955	40.0	-20	True	ATTAAA	-28
PB.11994.9	chrX	+	1585	12	full-splice_match	PDHA1	ENST00000379806.9	3484	12	39	1860	-1	1	multi-exon	FALSE	canonical	1	20366	junction_1	550466.4595500081	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	107	1393	30.0	-18	True	ATTAAA	-19
PB.4817.1	chr17	+	1945	5	full-splice_match	TRIM16L	ENST00000395671.9	1982	5	30	7	0	-1	multi-exon	FALSE	canonical	1	162005	junction_3	57308.47627751064	NA	1	NA	TRUE	NA	NA	NA	A	coding	348	1047	248	1294	25.0	-2	True	AATAAA	-15
PB.10589.2	chr7	-	2123	8	full-splice_match	STAG3L3	ENST00000428423.5	2137	8	3	11	0	-11	multi-exon	FALSE	canonical	1	1353	junction_1	71835.18038182819	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.4622.9	chr16	+	2195	10	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	67658	junction_1	150417.28854173282	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	162	533	20.0	-1	True	GATAAA	-15
PB.4622.8	chr16	+	2768	12	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	10295	junction_1	192376.94112624545	NA	4	1	TRUE	NA	NA	NA	C	coding	123	372	462	833	20.0	-1	True	GATAAA	-15
PB.11889.5	chr9	-	3078	12	full-splice_match	BRD3	ENST00000303407.11	5652	12	-4	2578	-4	519	multi-exon	FALSE	canonical	1	108094	junction_11	38375.81929262443	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	191	2371	85.0	4	True	NA	NA
PB.11868.9	chr9	-	4494	19	novel_in_catalog	DDX31	novel	2343	2	NA	NA	52	-2	intron_retention	FALSE	canonical	1	103930	junction_4	29989.39026324328	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	42	1544	10.0	7	True	NA	NA
PB.7800.2	chr22	-	3561	2	full-splice_match	RPS19BP1	ENST00000472291.1	869	2	-61	-2631	34	-1	multi-exon	FALSE	canonical	1	778966	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	111	336	84	419	15.0	0	True	AATAAA	-9
PB.9404.5	chr5	+	3716	7	full-splice_match	COMMD10	ENST00000632434.1	1433	7	14	-2297	14	2296	multi-exon	FALSE	canonical	1	256019	junction_5	60028.35133894835	NA	10	NA	TRUE	NA	NA	NA	C	coding	202	609	14	622	100.0	15	True	NA	NA
PB.9404.6	chr5	+	2463	6	novel_in_catalog	COMMD10	novel	1469	7	NA	NA	20	1160	combination_of_known_junctions	FALSE	canonical	1	3129	junction_4	152812.30300810206	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	8	505	30.0	21	True	AATAAA	-18
PB.7800.1	chr22	-	3312	3	novel_in_catalog	RPS19BP1	novel	927	4	NA	NA	-6	0	intron_retention	FALSE	canonical	1	778966	junction_2	452465.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	30	365	15.0	-20	True	AATAAA	-10
PB.9404.1	chr5	+	3507	6	novel_not_in_catalog	COMMD10	novel	1469	7	NA	NA	-15	-28695	any annotated donor/acceptor	FALSE	canonical	1	902	junction_5	135590.16376183045	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	78	590	15.0	-49	False	NA	NA
PB.9404.2	chr5	+	2936	7	full-splice_match	COMMD10	ENST00000274458.8	1469	7	-15	-1452	-15	1452	multi-exon	FALSE	canonical	1	256019	junction_5	60028.35133894835	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	78	686	25.0	-49	False	NA	NA
PB.9404.3	chr5	+	2603	7	full-splice_match	COMMD10	ENST00000632434.1	1433	7	-9	-1161	1	1160	multi-exon	FALSE	canonical	1	256019	junction_5	60028.35133894835	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	37	645	30.0	-8	True	AATAAA	-18
PB.4248.1	chr16	+	1453	2	full-splice_match	RMI2	ENST00000312499.5	1457	2	4	0	4	0	multi-exon	FALSE	canonical	1	126647	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	147	444	38	481	20.0	-24	True	AATAAA	-15
PB.6566.1	chr2	+	2104	4	full-splice_match	WBP1	ENST00000484744.5	2047	4	-57	0	2	0	multi-exon	FALSE	canonical	1	106515	junction_2	138881.34470675158	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-36	False	ATTAAA	-16
PB.6566.2	chr2	+	2159	3	full-splice_match	WBP1	ENST00000490120.1	919	3	-785	-455	-12	0	multi-exon	FALSE	canonical	1	106515	junction_1	157600.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-11	False	ATTAAA	-16
PB.9216.2	chr5	-	2224	2	full-splice_match	NNT-AS1	ENST00000506247.1	579	2	80	-1725	26	1725	multi-exon	FALSE	canonical	1	3948	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	5	18	732	749	80.0	-47	True	NA	NA
PB.9216.1	chr5	-	2972	3	full-splice_match	NNT-AS1	ENST00000513560.6	4769	3	206	1591	39	-1591	multi-exon	FALSE	canonical	1	45972	junction_1	26663.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	2	True	NA	NA
PB.2360.9	chr11	-	3406	13	novel_in_catalog	SRPRA	novel	3069	14	NA	NA	28	-15	intron_retention	FALSE	canonical	1	894536	junction_12	210891.4824153744	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	89	1807	10.0	2	True	NA	NA
PB.2360.4	chr11	-	2225	12	novel_not_in_catalog	SRPRA	novel	3069	14	NA	NA	33	-13	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	426247.8549310704	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	84	1568	10.0	7	True	NA	NA
PB.2360.5	chr11	-	4063	11	incomplete-splice_match	SRPRA	ENST00000332118.10	3069	14	96	14	57	-14	intron_retention	FALSE	canonical	1	1038547	junction_4	155866.089626352	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	1569	3080	10.0	31	True	NA	NA
PB.2360.6	chr11	-	3160	13	novel_in_catalog	SRPRA	novel	3069	14	NA	NA	2	-14	intron_retention	FALSE	canonical	1	894536	junction_12	203814.79071592522	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	115	2001	10.0	0	True	NA	NA
PB.2360.7	chr11	-	2824	15	novel_not_in_catalog	SRPRA	novel	3069	14	NA	NA	31	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	387394.68800879107	NA	1	1	TRUE	NA	NA	NA	C	coding	638	1917	86	2002	10.0	5	True	NA	NA
PB.536.4	chr1	-	1855	18	novel_in_catalog	GLMN	novel	1995	19	NA	NA	-5	-24	combination_of_known_junctions	FALSE	canonical	1	16591	junction_7	42362.984720905435	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	99	1841	75.0	-6	True	GATAAA	-19
PB.2360.1	chr11	-	2966	14	full-splice_match	SRPRA	ENST00000332118.10	3069	14	89	14	50	-14	multi-exon	FALSE	canonical	1	894536	junction_13	202715.2176408362	NA	13	NA	TRUE	NA	NA	NA	C	coding	638	1917	67	1983	10.0	24	True	NA	NA
PB.2360.3	chr11	-	2908	13	full-splice_match	SRPRA	ENST00000532259.1	2453	13	87	-542	25	-13	multi-exon	FALSE	canonical	1	11753	junction_12	404780.1820141602	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	92	1924	10.0	-1	True	NA	NA
PB.11863.3	chr9	-	2313	8	novel_not_in_catalog	UCK1	novel	2051	7	NA	NA	17	-3	any annotated donor/acceptor	FALSE	canonical	1	5098	junction_3	184027.4969638383	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	47	868	20.0	-8	True	AATAAA	-18
PB.9375.1	chr5	-	2531	1	genic	EFNA5	novel	NA	NA	NA	NA	9135	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	162	489	1664	2152	5.0	1229	False	AATAAA	-31
PB.11863.2	chr9	-	2169	7	full-splice_match	UCK1	ENST00000372215.4	2167	7	1	-3	1	3	multi-exon	FALSE	canonical	1	274316	junction_6	58126.89760056584	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	94	927	15.0	-5	True	AATAAA	-24
PB.11863.1	chr9	-	2159	7	novel_not_in_catalog	UCK1	novel	2051	7	NA	NA	-13	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	156771.3848683986	NA	2	1	TRUE	NA	NA	NA	C	coding	234	705	212	916	15.0	-19	True	AATAAA	-25
PB.6584.4	chr2	-	4251	17	full-splice_match	GCFC2	ENST00000409857.7	2516	17	-32	-1703	17	-8	multi-exon	FALSE	canonical	1	5229	junction_14	42911.779009381564	NA	3	1	TRUE	NA	NA	NA	C	coding	743	2232	70	2301	55.0	-10	True	ATTAAA	-10
PB.6584.5	chr2	-	2454	17	novel_not_in_catalog	GCFC2	novel	423	3	NA	NA	-86	0	any annotated donor/acceptor	FALSE	canonical	1	26234	junction_15	38598.786710003915	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	369	2207	5.0	7	True	ATTAAA	-39
PB.6584.6	chr2	-	2463	17	full-splice_match	GCFC2	ENST00000321027.7	4440	17	248	1729	-135	-16	multi-exon	FALSE	canonical	1	90909	junction_16	26213.3357329069	NA	3	NA	TRUE	NA	NA	NA	C	coding	612	1839	394	2232	15.0	1320	False	ATTAAA	-23
PB.6584.7	chr2	-	2525	17	full-splice_match	GCFC2	ENST00000409857.7	2516	17	-25	16	-18	-16	multi-exon	FALSE	canonical	1	5229	junction_14	42911.779009381564	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	63	2294	15.0	-3	True	ATTAAA	-23
PB.747.10	chr1	-	3638	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-29	-1	intron_retention	FALSE	canonical	1	1679	junction_10	145099.82806678303	NA	12	2	TRUE	NA	NA	NA	C	coding	616	1851	243	2093	5.0	197	False	NA	NA
PB.6584.1	chr2	-	4149	17	full-splice_match	GCFC2	ENST00000321027.7	4440	17	289	2	-94	0	multi-exon	FALSE	canonical	1	90909	junction_16	26213.3357329069	NA	3	1	TRUE	NA	NA	NA	C	coding	612	1839	353	2191	40.0	-1	True	ATTAAA	-18
PB.6584.2	chr2	-	4237	18	novel_not_in_catalog	GCFC2	novel	423	3	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	49564.31812661606	NA	3	NA	TRUE	NA	NA	NA	C	coding	612	1839	441	2279	40.0	3	True	ATTAAA	-18
PB.6584.3	chr2	-	4122	16	novel_in_catalog	GCFC2	novel	423	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	7398	junction_14	43120.15501899573	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	44	2164	40.0	16	True	ATTAAA	-18
PB.5434.1	chr18	-	3359	1	intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	129	390	783	1172	90.0	-1	True	NA	NA
PB.6584.8	chr2	-	2213	17	novel_not_in_catalog	GCFC2	novel	423	3	NA	NA	-70	1	any annotated donor/acceptor	FALSE	canonical	1	26234	junction_15	38598.786710003915	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	353	2191	50.0	23	True	AATAAA	-18
PB.6584.9	chr2	-	2440	17	full-splice_match	GCFC2	ENST00000321027.7	4440	17	65	1935	17	4	multi-exon	FALSE	canonical	1	90909	junction_16	26213.3357329069	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	70	2415	35.0	-10	True	AATAAA	-21
PB.3896.3	chr15	-	5319	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	180	5932	-7	2133	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	487	2511	35.0	-11	True	TATAAA	-18
PB.3896.2	chr15	-	5376	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	251	5804	-7	2261	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	194	2440	20.0	-21	True	AATAAA	-22
PB.3896.1	chr15	-	5393	15	novel_in_catalog	ADAM10	novel	11431	16	NA	NA	-44	2263	no_combination_of_known_junctions	FALSE	canonical	1	24706	junction_9	239726.47653613184	NA	2	NA	TRUE	NA	NA	NA	C	coding	717	2154	302	2455	20.0	32	False	AATAAA	-24
PB.1129.1	chr1	-	5048	32	full-splice_match	EPRS	ENST00000366923.7	5014	32	-35	1	-35	-1	multi-exon	FALSE	canonical	1	605857	junction_24	259581.249550666	NA	1	NA	TRUE	NA	NA	NA	C	coding	1512	4539	306	4844	25.0	-22	False	AATAAA	-12
PB.11272.3	chr8	+	4047	2	full-splice_match	AP000424.1	ENST00000521851.1	558	2	-4	-3485	-4	3485	multi-exon	FALSE	canonical	1	1454	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	3599	3898	80.0	-2	True	AATAAA	-5
PB.11272.2	chr8	+	1153	2	novel_not_in_catalog	AP000424.1	novel	558	2	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	10815	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-16
PB.3896.5	chr15	-	4739	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	293	6399	22	1666	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	152	2398	40.0	21	True	AATAAA	-17
PB.3896.4	chr15	-	4764	15	novel_in_catalog	ADAM10	novel	11431	16	NA	NA	3	1681	no_combination_of_known_junctions	FALSE	canonical	1	24706	junction_9	239726.47653613184	NA	3	NA	TRUE	NA	NA	NA	C	coding	643	1932	477	2408	30.0	-1	True	AATAAA	-32
PB.8833.3	chr4	-	2144	11	full-splice_match	NUP54	ENST00000514987.5	1563	11	-36	-545	1	-2	multi-exon	FALSE	canonical	1	15939	junction_9	152055.57071219062	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	60	1439	15.0	0	True	AATAAA	-27
PB.8419.14	chr3	-	4464	34	full-splice_match	STAG1	ENST00000383202.6	6055	34	-48	1639	-13	223	multi-exon	FALSE	canonical	1	147114	junction_30	42407.38547523074	NA	0	NA	TRUE	NA	NA	NA	C	coding	1258	3777	306	4082	20.0	-4	False	AGTAAA	-22
PB.3896.9	chr15	-	4443	15	novel_in_catalog	ADAM10	novel	11431	16	NA	NA	-7	1421	no_combination_of_known_junctions	FALSE	canonical	1	24706	junction_9	239726.47653613184	NA	2	NA	TRUE	NA	NA	NA	C	coding	717	2154	194	2347	35.0	-21	True	AATAAA	-10
PB.3896.8	chr15	-	4596	16	full-splice_match	ADAM10	ENST00000260408.7	11431	16	188	6647	1	1418	multi-exon	FALSE	canonical	1	394560	junction_15	168957.08161773576	NA	159	4	TRUE	NA	NA	NA	C	coding	674	2025	479	2503	30.0	-3	True	AATAAA	-7
PB.8419.11	chr3	-	5058	35	novel_in_catalog	STAG1	novel	6055	34	NA	NA	0	-20	combination_of_known_junctions	FALSE	canonical	1	5994	junction_27	64169.247216606964	NA	1	NA	TRUE	NA	NA	NA	C	coding	1032	3099	1114	4212	55.0	-1	True	AATAAA	-12
PB.10222.1	chr6	-	4490	5	full-splice_match	SLC2A12	ENST00000275230.5	4468	5	-59	37	-59	-37	multi-exon	FALSE	canonical	1	48098	junction_4	14743.341895581205	NA	0	NA	TRUE	NA	NA	NA	A	coding	617	1854	216	2069	80.0	-76	False	AATAAA	-22
PB.8419.12	chr3	-	4801	34	novel_not_in_catalog	STAG1	novel	6055	34	NA	NA	0	-22	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_30	55266.8832413087	NA	21	1	TRUE	NA	NA	NA	C	coding	1229	3690	268	3957	45.0	-1	True	AATAAA	-10
PB.726.1	chr1	+	4221	19	full-splice_match	ADAMTSL4	ENST00000271643.8	4250	19	29	0	-10	0	multi-exon	FALSE	canonical	1	56168	junction_2	44303.51604964454	NA	2	NA	TRUE	NA	NA	NA	C	coding	1074	3225	261	3485	25.0	-4164	False	ATTAAA	-18
PB.439.5	chr1	-	2276	7	novel_in_catalog	MYSM1	novel	7785	20	NA	NA	12	524	intron_retention	FALSE	canonical	1	84195	junction_6	24394.24922269363	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	891	1385	2275	70.0	0	True	AATAGA	-21
PB.37.3	chr1	-	3120	18	novel_in_catalog	PANK4	novel	2677	19	NA	NA	0	-7	intron_retention	FALSE	canonical	1	57351	junction_3	56914.22781908066	NA	2	NA	TRUE	NA	NA	NA	C	coding	615	1848	10	1857	35.0	-1	True	AATAGA	-7
PB.9220.8	chr5	+	4081	27	full-splice_match	PARP8	ENST00000505697.6	2747	27	5	-1339	3	33	multi-exon	FALSE	canonical	1	20066	junction_1	64775.02442838771	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	184	2742	30.0	5	True	AATAAA	-22
PB.3760.11	chr15	-	1353	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	0	4086	0	611	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1005	349	1353	45.0	-1	True	TATAAA	-10
PB.9220.4	chr5	+	2941	26	novel_in_catalog	PARP8	novel	597	7	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	20066	junction_1	78261.48251905275	NA	1	1	TRUE	NA	NA	NA	C	coding	607	1824	851	2674	35.0	2	True	AATAAA	-8
PB.9220.5	chr5	+	7194	27	full-splice_match	PARP8	ENST00000505697.6	2747	27	3	-4450	1	-4	multi-exon	FALSE	canonical	1	20066	junction_1	64775.02442838771	NA	4	2	TRUE	NA	NA	NA	C	coding	852	2559	186	2744	25.0	3	True	AATAAA	-18
PB.9220.6	chr5	+	3702	3	incomplete-splice_match	PARP8	ENST00000507812.5	554	6	2	90384	2	1986	3prime_fragment	FALSE	canonical	1	20066	junction_1	107077.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	4	True	TTTAAA	-27
PB.3760.10	chr15	-	1555	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	-8	3892	-8	805	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1197	357	1553	55.0	-9	True	TATAAA	-15
PB.9220.1	chr5	+	3110	28	novel_in_catalog	PARP8	novel	597	7	NA	NA	0	-7	combination_of_known_junctions	TRUE	canonical	1	9004	junction_4	87222.15852821454	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	460	2844	30.0	0	True	AATAAA	-7
PB.9220.2	chr5	+	2861	25	novel_in_catalog	PARP8	novel	597	7	NA	NA	1	-6	no_combination_of_known_junctions	FALSE	canonical	1	6781	junction_8	81130.22624609804	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	771	2594	35.0	1	True	AATAAA	-8
PB.9220.3	chr5	+	3011	27	full-splice_match	PARP8	ENST00000505697.6	2747	27	3	-267	1	-6	multi-exon	FALSE	canonical	1	20066	junction_1	64775.02442838771	NA	1	1	TRUE	NA	NA	NA	C	coding	852	2559	186	2744	35.0	3	True	AATAAA	-8
PB.10254.1	chr6	+	4236	12	full-splice_match	PHACTR2	ENST00000367582.7	4367	12	3	128	3	-128	multi-exon	FALSE	canonical	1	94917	junction_1	44954.67200074109	NA	0	NA	TRUE	NA	NA	NA	A	coding	565	1698	179	1876	90.0	21	True	NA	NA
PB.5566.10	chr19	+	4310	15	novel_in_catalog	MUM1	novel	522	3	NA	NA	15	-1	intron_retention	FALSE	canonical	1	32979	junction_1	97539.80630065023	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	531	2459	0.0	33	True	ATTAAA	-12
PB.9763.4	chr6	+	4118	5	full-splice_match	FAM8A1	ENST00000259963.3	4677	5	-3	562	-3	-562	multi-exon	FALSE	canonical	1	46163	junction_3	30964.251722752804	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	59	1300	50.0	-36	True	NA	NA
PB.4349.1	chr16	+	2710	12	novel_in_catalog	KIF22	novel	2505	14	NA	NA	-10	-1	intron_retention	TRUE	canonical	1	6509	junction_9	268029.44176512706	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	91	1545	5.0	-8039	False	AATACA	-14
PB.7684.22	chr22	+	2223	17	novel_in_catalog	EWSR1	novel	560	5	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	89384	junction_14	728281.4710799063	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	44	2050	10.0	26	True	ATTAAA	-14
PB.4349.3	chr16	+	3665	7	novel_in_catalog	KIF22	novel	2505	14	NA	NA	-7	2047	intron_retention	FALSE	canonical	1	409547	junction_1	135979.94511650933	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	73	1104	100.0	-27	True	NA	NA
PB.4349.2	chr16	+	1943	9	novel_in_catalog	KIF22	novel	2505	14	NA	NA	2	578	combination_of_known_junctions	FALSE	canonical	1	4178	junction_8	271377.6061390291	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	78	1367	35.0	-32	True	NA	NA
PB.4349.5	chr16	+	2839	13	novel_in_catalog	KIF22	novel	2505	14	NA	NA	7	0	intron_retention	FALSE	canonical	1	409547	junction_1	186093.81507012577	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	59	1759	5.0	-13	True	AATACA	-15
PB.4349.4	chr16	+	2903	13	novel_not_in_catalog	KIF22	novel	2505	14	NA	NA	-6	0	intron_retention	FALSE	canonical	1	16567	junction_9	279167.534517457	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	72	1661	5.0	-26	True	AATACA	-16
PB.4349.7	chr16	+	2088	14	full-splice_match	KIF22	ENST00000160827.8	2113	14	24	1	-10	0	multi-exon	FALSE	canonical	1	409547	junction_1	179161.4224130107	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	56	2014	5.0	-10	True	AATACA	-15
PB.4349.6	chr16	+	2178	13	novel_in_catalog	KIF22	novel	2505	14	NA	NA	7	-1	intron_retention	FALSE	canonical	1	409547	junction_1	172072.56205552985	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2118	59	2176	5.0	-13	True	AATACA	-14
PB.10935.1	chr7	-	2246	16	full-splice_match	AC021097.2	ENST00000222388.6	2185	16	-62	1	-62	-1	multi-exon	FALSE	canonical	1	13064	junction_1	193731.81288226487	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	109	2013	5.0	-37	True	AATAAA	-12
PB.2152.2	chr11	-	3310	8	full-splice_match	FAM168A	ENST00000356467.4	1767	8	-7	-1536	-1	1536	multi-exon	FALSE	canonical	1	154024	junction_5	43326.96175899374	NA	3	NA	TRUE	NA	NA	NA	C	coding	235	708	287	994	50.0	7	True	NA	NA
PB.8197.1	chr3	-	1570	10	novel_in_catalog	DNASE1L3	novel	1321	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	7084	junction_8	40035.45807233544	NA	2	NA	TRUE	NA	NA	NA	A	coding	285	858	653	1510	20.0	-10	True	AATAAA	-16
PB.12135.36	chrX	+	2382	12	incomplete-splice_match	OGT	ENST00000488174.5	7243	20	24089	302	737	-302	5prime_fragment	FALSE	canonical	1	967515	junction_9	240792.9464565764	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	138	1823	15.0	-5760	False	TATAAA	-15
PB.12135.35	chrX	+	2533	13	incomplete-splice_match	OGT	ENST00000488174.5	7243	20	23847	304	495	-304	5prime_fragment	FALSE	canonical	1	967515	junction_10	233900.5736840828	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	36	1976	20.0	-6002	False	TATAAA	-13
PB.10769.8	chr7	-	3100	16	full-splice_match	SRPK2	ENST00000393651.7	3650	16	-13	563	-9	357	multi-exon	FALSE	canonical	1	65457	junction_7	162081.38971634657	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	102	2201	45.0	0	True	ATTAAA	-15
PB.6509.4	chr2	+	3576	8	full-splice_match	SLC1A4	ENST00000234256.3	4561	8	-35	1020	-35	-1018	multi-exon	FALSE	canonical	1	291415	junction_1	45436.90377987964	NA	3	NA	TRUE	NA	NA	NA	C	coding	532	1599	279	1877	5.0	-33	True	ATTAAA	-25
PB.11226.37	chr8	-	2318	15	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-32	10	any annotated donor/acceptor	FALSE	canonical	1	12241	junction_14	142518.72840417808	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	140	2158	25.0	-35	True	AATAAA	-26
PB.10025.10	chr6	-	2708	14	novel_not_in_catalog	MUT	novel	3749	13	NA	NA	-66	-1183	any annotated donor/acceptor	FALSE	canonical	1	9231	junction_3	117906.80699136673	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	195	2237	75.0	-5	True	NA	NA
PB.4833.1	chr17	+	1294	7	full-splice_match	DHRS7B	ENST00000395511.7	2175	7	285	596	-10	-11	multi-exon	TRUE	canonical	1	140084	junction_1	77165.23933525164	NA	0	NA	TRUE	NA	NA	NA	A	coding	310	933	81	1013	25.0	-2	True	AATAAA	-30
PB.10025.11	chr6	-	2533	13	novel_not_in_catalog	MUT	novel	3749	13	NA	NA	-32	-1183	any annotated donor/acceptor	FALSE	canonical	1	34178	junction_12	91533.44471042023	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	96	2348	75.0	29	True	NA	NA
PB.10025.12	chr6	-	2452	13	novel_not_in_catalog	MUT	novel	3749	13	NA	NA	-94	-1183	any annotated donor/acceptor	FALSE	canonical	1	538	junction_10	104351.69952573712	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	978	2267	75.0	18	False	NA	NA
PB.2015.9	chr11	+	4672	7	full-splice_match	NAA40	ENST00000338447.10	4707	7	37	-2	0	2	multi-exon	FALSE	canonical	1	131612	junction_1	54070.61379550099	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	1366	1830	15.0	-6	True	AATAAA	-17
PB.2015.8	chr11	+	4862	6	novel_in_catalog	NAA40	novel	4707	7	NA	NA	0	2	intron_retention	FALSE	canonical	1	131612	junction_1	52000.192090414435	NA	4	NA	TRUE	NA	NA	NA	C	coding	123	372	102	473	15.0	-6	True	AATAAA	-17
PB.2015.7	chr11	+	3099	7	full-splice_match	NAA40	ENST00000534965.5	958	7	-5	-2136	-3	-508	multi-exon	FALSE	canonical	1	11790	junction_2	91687.68131982375	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	174	767	65.0	-11	True	NA	NA
PB.2015.6	chr11	+	3613	7	full-splice_match	NAA40	ENST00000534965.5	958	7	-12	-2643	-10	-1	multi-exon	FALSE	canonical	1	11790	junction_2	91687.68131982375	NA	4	NA	TRUE	NA	NA	NA	C	coding	197	594	181	774	15.0	-18	True	AATAAA	-14
PB.2015.5	chr11	+	3893	8	novel_in_catalog	NAA40	novel	4707	7	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	1	5981	junction_2	87547.30425318646	NA	5	NA	TRUE	NA	NA	NA	C	coding	154	465	591	1055	15.0	-20	True	AATAAA	-13
PB.2015.4	chr11	+	3275	7	full-splice_match	NAA40	ENST00000534965.5	958	7	-20	-2297	17	-347	multi-exon	FALSE	canonical	1	11790	junction_2	91687.68131982375	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	189	782	90.0	-26	True	NA	NA
PB.2015.3	chr11	+	3336	8	full-splice_match	NAA40	ENST00000377793.8	3664	8	-28	356	9	-347	multi-exon	FALSE	canonical	1	89934	junction_2	65632.35775071902	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	130	843	90.0	-60	False	NA	NA
PB.2015.2	chr11	+	3258	8	full-splice_match	NAA40	ENST00000377793.8	3664	8	-110	516	-73	-507	multi-exon	TRUE	canonical	1	89934	junction_2	65632.35775071902	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	212	925	65.0	-142	False	NA	NA
PB.2015.1	chr11	+	3676	8	full-splice_match	NAA40	ENST00000377793.8	3664	8	-14	2	-12	-2	multi-exon	FALSE	canonical	1	89934	junction_2	65632.35775071902	NA	2	NA	TRUE	NA	NA	NA	C	coding	237	714	116	829	15.0	-20	True	AATAAA	-22
PB.2729.1	chr12	-	5063	13	full-splice_match	GNS	ENST00000542058.5	2020	13	-11	-3032	5	2	multi-exon	FALSE	canonical	1	5191	junction_12	231407.03188015555	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	167	1765	10.0	-37	True	ATTAAA	-23
PB.4375.4	chr16	-	2962	3	full-splice_match	ZNF764	ENST00000395091.2	2970	3	6	2	6	-2	multi-exon	FALSE	canonical	1	54584	junction_2	1621.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	407	1224	311	1534	15.0	9	True	AGTAAA	-15
PB.5853.18	chr19	-	5843	9	novel_in_catalog	SUGP2	novel	747	6	NA	NA	2	-165	intron_retention	FALSE	canonical	1	218750	junction_8	130670.40066877234	NA	1	NA	TRUE	NA	NA	NA	C	coding	1092	3279	104	3382	70.0	-12	True	NA	NA
PB.2729.6	chr12	-	5008	13	novel_in_catalog	GNS	novel	4877	13	NA	NA	-5	1	no_combination_of_known_junctions	FALSE	canonical	1	11211	junction_3	240122.30880062573	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	161	1711	15.0	-31	True	ATTAAA	-22
PB.5853.16	chr19	-	5340	10	incomplete-splice_match	SUGP2	ENST00000337018.10	3640	11	42	1474	13	0	3prime_fragment	FALSE	canonical	1	218750	junction_9	132005.82058023702	NA	2	NA	TRUE	NA	NA	NA	C	coding	1082	3249	93	3341	90.0	-1	True	NA	NA
PB.5853.17	chr19	-	4563	11	full-splice_match	SUGP2	ENST00000452918.6	6176	11	-31	1644	0	-165	multi-exon	FALSE	canonical	1	218750	junction_10	125232.93275656368	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	106	3354	70.0	-14	True	NA	NA
PB.5853.14	chr19	-	5996	9	novel_in_catalog	SUGP2	novel	747	6	NA	NA	14	0	intron_retention	FALSE	canonical	1	218750	junction_8	130670.40066877234	NA	1	NA	TRUE	NA	NA	NA	C	coding	1092	3279	92	3370	90.0	0	True	NA	NA
PB.5853.15	chr19	-	5359	10	novel_in_catalog	SUGP2	novel	747	6	NA	NA	-5	0	intron_retention	FALSE	canonical	1	218750	junction_9	123286.47791141765	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	80	3358	90.0	12	True	NA	NA
PB.5853.12	chr19	-	7491	9	novel_in_catalog	SUGP2	novel	747	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	218750	junction_8	130670.40066877234	NA	3	NA	TRUE	NA	NA	NA	C	coding	1092	3279	114	3392	10.0	-22	True	AATAAA	-15
PB.5853.13	chr19	-	4715	11	full-splice_match	SUGP2	ENST00000452918.6	6176	11	-18	1479	13	0	multi-exon	FALSE	canonical	1	218750	junction_10	125232.93275656368	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	93	3341	90.0	-1	True	NA	NA
PB.5853.10	chr19	-	4459	12	novel_in_catalog	SUGP2	novel	747	6	NA	NA	-15	1	intron_retention	FALSE	canonical	1	19700	junction_4	226596.55157825554	NA	2	NA	TRUE	NA	NA	NA	C	coding	1007	3024	90	3113	5.0	2	True	AATAAA	-17
PB.5853.11	chr19	-	4348	11	novel_not_in_catalog	SUGP2	novel	747	6	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	189599.7069888295	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	92	3370	10.0	0	True	AATAAA	-15
PB.333.3	chr1	+	2737	18	full-splice_match	CTPS1	ENST00000648914.1	2648	18	-8	-81	1	-3	multi-exon	FALSE	canonical	1	51468	junction_13	193254.817115448	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	147	1502	20.0	1	True	NA	NA
PB.11478.7	chr9	+	5334	40	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	281	0	no_combination_of_known_junctions	FALSE	canonical	1	2144	junction_11	62753.02209362487	NA	1	NA	TRUE	NA	NA	NA	B	coding	1646	4941	68	5008	10.0	0	True	AGTAAA	-19
PB.11787.4	chr9	-	3953	6	full-splice_match	PPP6C	ENST00000415905.5	4172	6	136	83	15	-83	multi-exon	FALSE	canonical	1	38101	junction_4	394876.8125968401	NA	3	NA	TRUE	NA	NA	NA	C	coding	283	852	86	937	50.0	-18	True	AATAAA	-21
PB.693.13	chr1	+	2507	18	novel_not_in_catalog	AC242426.2	novel	573	3	NA	NA	69302	43102	intron_retention	FALSE	canonical	1	746	junction_1	146017.07340982268	NA	0	NA	TRUE	NA	NA	NA	B	coding	745	2238	18	2255	10.0	1	True	AATAAA	-14
PB.11023.1	chr8	+	2080	7	full-splice_match	C8orf58	ENST00000289989.9	2016	7	-68	4	-22	-1	multi-exon	FALSE	canonical	1	26162	junction_1	28966.04994165104	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	146	1240	40.0	-5471	False	NA	NA
PB.5979.5	chr19	-	2573	6	novel_not_in_catalog	HNRNPL	novel	1948	11	NA	NA	0	1248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	291309.06598772376	NA	1	NA	TRUE	NA	NA	NA	A	coding	280	843	68	910	85.0	-4	True	NA	NA
PB.693.10	chr1	+	3038	23	novel_not_in_catalog	AC242426.2	novel	573	3	NA	NA	69297	43101	intron_retention	FALSE	canonical	1	301	junction_5	168462.1911953996	NA	1	1	TRUE	NA	NA	NA	B	coding	470	1413	1375	2787	15.0	-4	True	AATAAA	-13
PB.11359.11	chr8	+	2708	4	full-splice_match	PTP4A3	ENST00000349124.2	2710	4	-1	3	-1	-3	multi-exon	FALSE	canonical	1	31868	junction_3	230519.20284002373	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	855	1301	15.0	1	True	AGTAAA	-18
PB.693.11	chr1	+	4154	21	novel_not_in_catalog	AC242426.2	novel	573	3	NA	NA	69301	43101	intron_retention	FALSE	non_canonical	0	0	junction_6	171559.65667378652	NA	1	NA	TRUE	NA	NA	NA	B	coding	470	1413	2491	3903	15.0	0	True	AATAAA	-13
PB.11994.10	chrX	+	1465	11	full-splice_match	PDHA1	ENST00000422285.6	3310	11	14	1831	-3	10	multi-exon	FALSE	canonical	1	647730	junction_1	332088.34896448866	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	92	1264	40.0	-3	True	ATTAAA	-28
PB.11994.11	chrX	+	3360	12	full-splice_match	PDHA1	ENST00000379806.9	3484	12	62	62	5	-42	multi-exon	FALSE	canonical	1	20366	junction_1	550466.4595500081	NA	3	NA	TRUE	NA	NA	NA	C	coding	428	1287	84	1370	45.0	5	True	CATAAA	-8
PB.693.17	chr1	+	1677	11	incomplete-splice_match	CHD1L	ENST00000488864.5	2415	18	32647	1	4356	-1	5prime_fragment	FALSE	canonical	1	400129	junction_9	89493.9884039146	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	15	1427	15.0	414	False	AATAAA	-12
PB.1672.1	chr10	-	5994	9	full-splice_match	CACUL1	ENST00000369151.7	11311	9	234	5083	234	3062	multi-exon	FALSE	canonical	1	176343	junction_6	54122.29151407371	NA	2	1	TRUE	NA	NA	NA	C	coding	369	1110	251	1360	30.0	-43	True	AATAAA	-29
PB.9218.4	chr5	+	2886	4	novel_in_catalog	MRPS30	novel	1678	5	NA	NA	22	-215	intron_retention	FALSE	canonical	1	705516	junction_2	89049.77264553921	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	2032	2781	35.0	-2	True	ATTAAA	-18
PB.1672.3	chr10	-	2891	9	full-splice_match	CACUL1	ENST00000369151.7	11311	9	276	8144	276	1	multi-exon	FALSE	canonical	1	176343	junction_6	54122.29151407371	NA	4	NA	TRUE	NA	NA	NA	C	coding	369	1110	209	1318	25.0	-1	True	AGTAAA	-34
PB.1672.2	chr10	-	3440	9	full-splice_match	CACUL1	ENST00000369151.7	11311	9	247	7624	247	521	multi-exon	FALSE	canonical	1	176343	junction_6	54122.29151407371	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	238	1347	30.0	-30	True	AATAAA	-20
PB.1672.5	chr10	-	1356	8	novel_in_catalog	CACUL1	novel	1060	8	NA	NA	256	-12	no_combination_of_known_junctions	FALSE	canonical	1	2095	junction_2	102809.84047378392	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1128	229	1356	85.0	-21	True	NA	NA
PB.1672.4	chr10	-	1495	9	full-splice_match	CACUL1	ENST00000369151.7	11311	9	256	9560	256	-12	multi-exon	FALSE	canonical	1	176343	junction_6	54122.29151407371	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	229	1338	85.0	-21	True	NA	NA
PB.1672.7	chr10	-	2673	2	novel_in_catalog	CACUL1	novel	11311	9	NA	NA	256	842	intron_retention	FALSE	canonical	1	184290	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	165	498	229	726	95.0	-21	True	NA	NA
PB.1672.6	chr10	-	3903	6	incomplete-splice_match	CACUL1	ENST00000369151.7	11311	9	244	15953	244	2557	3prime_fragment	FALSE	canonical	1	176343	junction_3	37978.255691382146	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	241	1218	20.0	-33	True	AATAAA	-21
PB.5903.4	chr19	+	5360	2	incomplete-splice_match	PDCD5	ENST00000221784.8	558	6	-12	9	-11	2	intron_retention	FALSE	canonical	1	1942875	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	AATAAA	-11
PB.8833.8	chr4	-	1926	11	full-splice_match	NUP54	ENST00000514987.5	1563	11	-32	-331	5	-211	multi-exon	FALSE	canonical	1	15939	junction_9	152055.57071219062	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	56	1435	35.0	4	True	AGTAAA	-9
PB.5612.4	chr19	-	1954	11	novel_not_in_catalog	MFSD12	novel	986	5	NA	NA	-11	0	intron_retention	TRUE	non_canonical	0	0	junction_10	263665.9072265506	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	113	1444	5.0	-1	True	AATAAA	-12
PB.5612.3	chr19	-	1614	10	novel_not_in_catalog	MFSD12	novel	986	5	NA	NA	-13	-26	any annotated donor/acceptor	FALSE	canonical	1	2428	junction_9	318874.9987233861	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	591	1160	80.0	-3	True	NA	NA
PB.5612.2	chr19	-	1823	1	full-splice_match	MFSD12	ENST00000585788.1	1769	1	-80	26	-80	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	143	432	335	766	80.0	7882	False	NA	NA
PB.5612.1	chr19	-	1868	11	novel_not_in_catalog	MFSD12	novel	986	5	NA	NA	-27	-25	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	305453.85607020906	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	103	1413	80.0	494	False	NA	NA
PB.8263.11	chr3	+	3775	20	novel_not_in_catalog	TBC1D23	novel	587	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	135	junction_1	89510.55404705991	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	551	2194	20.0	20	True	AATAAA	-30
PB.8098.1	chr3	-	1798	9	full-splice_match	SLC25A20	ENST00000319017.4	1879	9	90	-9	1	4	multi-exon	FALSE	canonical	1	150985	junction_8	37780.95859999287	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	110	1015	15.0	-42	True	AATAAA	-24
PB.10800.11	chr7	+	5043	18	incomplete-splice_match	MET	ENST00000397752.7	6635	21	67556	2	15802	-2	5prime_fragment	FALSE	canonical	1	336405	junction_14	95909.15302384265	NA	18	2	TRUE	NA	NA	NA	C	coding	772	2319	465	2783	25.0	8164	False	ATTAAA	-22
PB.8098.2	chr3	-	2252	8	novel_in_catalog	SLC25A20	novel	1576	7	NA	NA	0	2	intron_retention	FALSE	canonical	1	150985	junction_7	31915.24268037044	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	111	884	20.0	-43	True	AATAAA	-17
PB.5903.5	chr19	+	1839	4	full-splice_match	PDCD5	ENST00000419343.7	1799	4	-11	-29	-11	2	multi-exon	FALSE	canonical	1	927011	junction_3	417929.42686322314	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	73	462	55.0	0	True	AATAAA	-11
PB.6918.10	chr2	-	2773	18	novel_not_in_catalog	GTF3C3	novel	4282	18	NA	NA	10	198	any annotated donor/acceptor	FALSE	canonical	1	1957	junction_8	125944.41084442016	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	635	1450	35.0	4	True	NA	NA
PB.197.9	chr1	+	3462	1	genic	HMGN2	novel	NA	NA	NA	NA	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-725	False	AATAAA	-22
PB.10340.4	chr6	+	1788	1	full-splice_match	C6orf120	ENST00000332290.3	2667	1	116	763	116	-763	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	191	576	155	730	60.0	-10	False	NA	NA
PB.724.13	chr1	+	2576	17	novel_in_catalog	TARS2	novel	2188	14	NA	NA	1	-31	no_combination_of_known_junctions	FALSE	canonical	1	5247	junction_8	90744.39417136104	NA	1	NA	TRUE	NA	NA	NA	C	coding	685	2058	16	2073	75.0	1	True	NA	NA
PB.10800.12	chr7	+	4726	16	incomplete-splice_match	MET	ENST00000397752.7	6635	21	82961	10	-3164	-10	5prime_fragment	FALSE	canonical	1	336405	junction_12	101334.43288767479	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	156	2474	30.0	NA	False	ATTAAA	-14
PB.6948.5	chr2	-	6469	35	novel_not_in_catalog	ALS2	novel	6644	34	NA	NA	13	0	any annotated donor/acceptor	FALSE	canonical	1	847	junction_31	37456.59743058611	NA	16	1	TRUE	NA	NA	NA	C	coding	1544	4635	538	5172	15.0	-6	True	AATAAA	-15
PB.10333.5	chr6	+	2982	3	full-splice_match	CCR6	ENST00000341935.9	4018	3	269	767	267	-17	multi-exon	FALSE	canonical	1	21824	junction_1	16985.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	374	1125	284	1408	100.0	-93	False	NA	NA
PB.10340.2	chr6	+	2548	1	full-splice_match	C6orf120	ENST00000332290.3	2667	1	127	-8	127	8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	191	576	144	719	45.0	1	True	AATAAA	-16
PB.96.3	chr1	-	2244	1	incomplete-splice_match	MTHFR	ENST00000376592.6	8378	12	16548	899	7680	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	127	384	627	1010	95.0	7684	False	NA	NA
PB.11772.2	chr9	-	3216	1	incomplete-splice_match	RC3H2	ENST00000373670.5	9248	20	50334	5	3793	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-16
PB.724.11	chr1	+	2575	16	novel_in_catalog	TARS2	novel	2188	14	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	391	junction_5	91832.0534597806	NA	1	1	TRUE	NA	NA	NA	C	coding	670	2013	20	2032	15.0	-3	True	NA	NA
PB.10340.3	chr6	+	3278	1	full-splice_match	C6orf120	ENST00000332290.3	2667	1	126	-737	126	737	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	191	576	145	720	50.0	0	True	AATAAA	-19
PB.3469.1	chr14	+	5350	30	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	1	24851	junction_29	26723.742142030216	NA	1	NA	TRUE	NA	NA	NA	B	coding	1526	4581	579	5159	20.0	-41	True	AATAAA	-19
PB.5234.1	chr17	+	3554	5	full-splice_match	CDR2L	ENST00000337231.5	3536	5	-29	11	-29	-11	multi-exon	FALSE	canonical	1	121944	junction_1	36867.213126130104	NA	1	NA	TRUE	NA	NA	NA	A	coding	465	1398	442	1839	50.0	-29	True	AATAAA	-18
PB.3469.2	chr14	+	4794	31	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	1	12732	junction_1	27153.729430391122	NA	0	NA	TRUE	NA	NA	NA	B	coding	1463	4392	217	4608	30.0	-30	True	AATAAA	-14
PB.3469.5	chr14	+	1896	10	incomplete-splice_match	KIAA0586	ENST00000261244.9	4807	30	-291	91267	15	8287	3prime_fragment	FALSE	canonical	1	66025	junction_8	11582.67600053344	NA	0	NA	TRUE	NA	NA	NA	B	coding	443	1329	567	1895	75.0	-29	True	ACTAAA	-44
PB.3469.4	chr14	+	5329	31	incomplete-splice_match	KIAA0586	ENST00000619416.4	8233	32	306	3232	-14	3	5prime_fragment	FALSE	canonical	1	66025	junction_8	21859.495218859316	NA	1	NA	TRUE	NA	NA	NA	B	coding	1548	4647	558	5204	75.0	-20	True	NA	NA
PB.3469.7	chr14	+	5951	30	novel_not_in_catalog	KIAA0586	novel	5226	34	NA	NA	-5	-5381	any annotated donor/acceptor	FALSE	canonical	1	5625	junction_29	31716.21437263276	NA	0	NA	TRUE	NA	NA	NA	B	coding	1401	4206	154	4359	15.0	-11	True	AATAAA	-20
PB.3469.6	chr14	+	2036	11	incomplete-splice_match	KIAA0586	ENST00000261244.9	4807	30	-278	90166	-10	9388	3prime_fragment	FALSE	canonical	1	66025	junction_8	11468.845931914859	NA	0	NA	TRUE	NA	NA	NA	B	coding	494	1482	554	2035	65.0	-16	True	NA	NA
PB.1427.1	chr10	-	2975	2	full-splice_match	EGR2	ENST00000242480.3	2968	2	-11	4	0	0	multi-exon	FALSE	canonical	1	170569	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	341	1768	35.0	-1	True	AATAAA	-12
PB.3469.8	chr14	+	4673	30	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	-3	9	combination_of_known_junctions	FALSE	canonical	1	24851	junction_29	29814.69047027468	NA	0	NA	TRUE	NA	NA	NA	B	coding	1441	4326	152	4477	15.0	-9	True	AATAAA	-24
PB.1427.3	chr10	-	2689	3	novel_in_catalog	EGR2	novel	1075	2	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	3556	junction_2	83506.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	205	1485	35.0	-1	True	AATAAA	-9
PB.1427.2	chr10	-	2872	3	full-splice_match	EGR2	ENST00000411732.3	2824	3	-51	3	0	0	multi-exon	FALSE	canonical	1	9915	junction_2	80327.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	388	1668	35.0	-1	True	AATAAA	-9
PB.4274.4	chr16	+	2974	9	incomplete-splice_match	NOMO3	ENST00000263012.10	3911	32	9	40330	9	-1578	3prime_fragment	FALSE	canonical	1	3941	junction_5	4997.60294885208	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	58	1098	90.0	82	False	AAGAAA	-11
PB.4274.5	chr16	+	4236	31	full-splice_match	NOMO3	ENST00000399336.8	4356	31	117	3	11	1	multi-exon	FALSE	canonical	1	3941	junction_5	93250.09338121628	NA	4	NA	TRUE	NA	NA	NA	C	coding	1222	3669	56	3724	25.0	84	False	AATAAA	-29
PB.4274.6	chr16	+	3916	32	novel_not_in_catalog	NOMO3	novel	4356	31	NA	NA	15	-1	any annotated donor/acceptor	FALSE	canonical	1	260	junction_31	91945.10244835955	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	20	3688	30.0	120	False	AATAAA	-23
PB.8132.2	chr3	-	3023	1	novel_in_catalog	HYAL3	novel	1942	4	NA	NA	-24	-1279	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	286	861	1963	2823	20.0	-23	True	AATAAA	-14
PB.4274.1	chr16	+	3967	32	full-splice_match	NOMO3	ENST00000263012.10	3911	32	-52	-4	19	0	multi-exon	TRUE	canonical	1	107	junction_31	91946.93835917207	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	119	3922	25.0	21	False	AATAAA	-28
PB.4274.2	chr16	+	4347	31	novel_not_in_catalog	NOMO3	novel	4356	31	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_23	93334.26393774153	NA	0	NA	TRUE	NA	NA	NA	C	coding	946	2841	80	2920	25.0	60	False	AATAAA	-28
PB.4274.3	chr16	+	3720	23	incomplete-splice_match	NOMO3	ENST00000263012.10	3911	32	9	16417	9	188	3prime_fragment	FALSE	canonical	1	3941	junction_5	107208.11902445821	NA	0	NA	TRUE	NA	NA	NA	C	coding	946	2841	58	2898	95.0	82	False	NA	NA
PB.724.14	chr1	+	2589	3	novel_not_in_catalog	TARS2	novel	2188	14	NA	NA	0	-664	intron_retention	FALSE	non_canonical	0	0	junction_2	149575.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	7	True	NA	NA
PB.333.7	chr1	+	2009	9	incomplete-splice_match	CTPS1	ENST00000463285.6	1607	13	-50	5855	3	2038	3prime_fragment	FALSE	canonical	1	320551	junction_1	116524.74313289646	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	136	1194	95.0	12	True	NA	NA
PB.11478.3	chr9	+	5668	43	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	277	1	no_combination_of_known_junctions	FALSE	canonical	1	2664	junction_35	61934.81578771019	NA	1	NA	TRUE	NA	NA	NA	B	coding	1758	5277	72	5348	10.0	-4	True	AGTAAA	-13
PB.7155.5	chr20	+	1622	7	full-splice_match	PANK2	ENST00000336066.7	1843	7	-10	231	-8	-7	multi-exon	FALSE	canonical	1	170604	junction_2	84529.29317780251	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	92	568	5.0	-8	True	NA	NA
PB.6663.2	chr2	-	2476	7	full-splice_match	RNF149	ENST00000295317.3	2458	7	-23	5	-18	-5	multi-exon	FALSE	canonical	1	342044	junction_6	86628.49981658589	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	132	1334	55.0	0	True	AATAAA	-10
PB.3816.1	chr15	-	2818	1	full-splice_match	LCMT2	ENST00000305641.6	6957	1	10	4129	10	508	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	686	2061	107	2167	25.0	-23	True	AATAAA	-19
PB.9347.1	chr5	-	4577	1	genic	KIAA0825_AC025766.1	novel	NA	NA	NA	NA	-3	-2118	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	3	True	AATAAA	-13
PB.8658.2	chr4	+	2836	16	novel_not_in_catalog	TACC3	novel	1756	16	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	27772	junction_10	333131.07799676823	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	153	2681	30.0	-29	True	AATAAA	-17
PB.11478.2	chr9	+	5791	44	novel_not_in_catalog	FOCAD	novel	6096	46	NA	NA	251	-2	any annotated donor/acceptor	FALSE	canonical	1	324	junction_11	60799.330195813825	NA	10	1	TRUE	NA	NA	NA	B	coding	1789	5370	98	5467	5.0	-56	False	AGTAAA	-17
PB.8658.1	chr4	+	2831	16	full-splice_match	TACC3	ENST00000313288.8	2781	16	-47	-3	2	-2	multi-exon	FALSE	canonical	1	174842	junction_1	276765.6952340734	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	154	2670	15.0	-30	True	AATAAA	-23
PB.12155.14	chrX	-	2321	12	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	261739.17239303663	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	26	1033	90.0	-5	True	NA	NA
PB.12288.5	chrX	+	4580	17	full-splice_match	SLC9A6	ENST00000370701.6	4755	17	312	-137	12	0	multi-exon	FALSE	canonical	1	10258	junction_1	39592.725096442904	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	88	2037	30.0	-8	True	AATAAA	-24
PB.12288.4	chrX	+	4348	17	novel_in_catalog	SLC9A6	novel	4867	18	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	1	6513	junction_3	49598.78800651125	NA	1	1	TRUE	NA	NA	NA	C	coding	617	1854	98	1951	45.0	-18	True	ATTAAA	-17
PB.12288.7	chrX	+	4526	16	full-splice_match	SLC9A6	ENST00000636206.1	4711	16	54	131	54	0	multi-exon	FALSE	canonical	1	90186	junction_2	23291.964905997564	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	15	2120	30.0	-9	True	ATTAAA	-26
PB.12288.6	chrX	+	4523	16	novel_not_in_catalog	SLC9A6	novel	4867	18	NA	NA	16	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	54221.5748988045	NA	28	4	TRUE	NA	NA	NA	C	coding	376	1131	53	1183	30.0	-4	True	ATTAAA	-24
PB.12288.1	chrX	+	4466	17	full-splice_match	SLC9A6	ENST00000370701.6	4755	17	291	-2	-1	2	multi-exon	FALSE	canonical	1	10258	junction_1	39592.725096442904	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	109	2058	30.0	-29	True	ATTAAA	-28
PB.12288.3	chrX	+	4481	16	full-splice_match	SLC9A6	ENST00000370698.7	4631	16	10	140	2	-1	multi-exon	FALSE	canonical	1	6513	junction_2	39827.917894640465	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	67	2076	30.0	-18	True	ATTAAA	-25
PB.12288.2	chrX	+	4717	16	full-splice_match	SLC9A6	ENST00000636206.1	4711	16	0	-6	0	0	multi-exon	FALSE	canonical	1	90186	junction_2	23291.964905997564	NA	3	NA	TRUE	NA	NA	NA	C	coding	701	2106	69	2174	30.0	-20	True	AATAAA	-24
PB.4335.9	chr16	+	3044	22	novel_not_in_catalog	EIF3C	novel	3128	21	NA	NA	-1	23	any annotated donor/acceptor	FALSE	canonical	1	12	junction_8	85331.64129883378	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	1143	2936	25.0	-1	True	ACTAAA	-41
PB.3504.19	chr14	-	2836	3	full-splice_match	MAX	ENST00000556443.5	585	3	-22	-2229	5	-1	multi-exon	FALSE	canonical	1	395707	junction_2	353768.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	201	578	5.0	-1	True	CATAAA	-17
PB.3504.18	chr14	-	2857	4	full-splice_match	MAX	ENST00000284165.10	3155	4	-44	342	12	0	multi-exon	FALSE	canonical	1	388320	junction_3	319204.34707879525	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	194	598	5.0	6	True	CATAAA	-18
PB.860.4	chr1	+	3622	6	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	206654	junction_1	133590.6560708495	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	56	880	40.0	0	True	NA	NA
PB.860.5	chr1	+	2338	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-18	369	0	-362	multi-exon	TRUE	canonical	1	206654	junction_1	123244.62548074414	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	56	1063	65.0	0	True	NA	NA
PB.513.2	chr1	-	4238	42	novel_not_in_catalog	COL24A1	novel	6825	60	NA	NA	163841	-6	any annotated donor/acceptor	FALSE	canonical	1	18631	junction_15	6537.222041435973	NA	0	NA	TRUE	NA	NA	NA	B	coding	850	2553	379	2931	30.0	-43	False	AATAAA	-11
PB.860.7	chr1	+	2157	4	full-splice_match	SLAMF7	ENST00000458104.6	2345	4	190	-2	0	2	multi-exon	FALSE	canonical	1	14005	junction_2	266837.7492039352	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	56	505	40.0	0	True	NA	NA
PB.5242.4	chr17	+	2238	20	novel_in_catalog	NUP85	novel	553	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	24902	junction_11	180881.8068298404	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	57	1160	20.0	27	True	AATAAA	-17
PB.5242.5	chr17	+	3070	20	novel_not_in_catalog	NUP85	novel	553	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	10920	junction_11	182606.91058217277	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	56	1264	25.0	28	True	AATAAA	-18
PB.4335.2	chr16	+	2907	21	full-splice_match	EIF3C	ENST00000331666.10	3145	21	105	133	5	0	multi-exon	FALSE	canonical	1	4648	junction_1	86361.2440649595	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	82	2823	5.0	-6	True	ACTAAA	-17
PB.4335.3	chr16	+	3054	21	full-splice_match	EIF3C	ENST00000331666.10	3145	21	88	3	-12	0	multi-exon	FALSE	canonical	1	4648	junction_1	86361.2440649595	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	99	2840	20.0	-43	False	NA	NA
PB.4335.4	chr16	+	3128	21	novel_not_in_catalog	EIF3C	novel	3128	21	NA	NA	-2	0	intron_retention	FALSE	canonical	1	12	junction_8	87306.46079494918	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	1155	2552	5.0	-13	True	ACTAAA	-15
PB.4335.5	chr16	+	2961	21	full-splice_match	EIF3C	ENST00000395587.5	3137	21	47	129	1	0	multi-exon	FALSE	canonical	1	168	junction_1	86476.4520250889	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	135	2876	5.0	-10	True	ACTAAA	-18
PB.5242.2	chr17	+	2430	18	novel_in_catalog	NUP85	novel	553	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	320393	junction_6	119446.64335594978	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	71	1963	25.0	13	True	AATAAA	-18
PB.5242.3	chr17	+	2128	19	novel_in_catalog	NUP85	novel	553	6	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	3850	junction_1	159700.1794425656	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	147	2051	20.0	26	True	AATAAA	-17
PB.10696.21	chr7	+	2067	10	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	48832	125	intron_retention	FALSE	canonical	1	1683	junction_7	1090394.4689847084	NA	3	NA	TRUE	NA	NA	NA	B	coding	268	807	66	872	95.0	0	True	AATAAA	-12
PB.10696.20	chr7	+	2643	10	novel_in_catalog	AC004922.1	novel	2430	17	NA	NA	48832	45	intron_retention	FALSE	canonical	1	7978	junction_4	1065763.0221785286	NA	1	NA	TRUE	NA	NA	NA	B	coding	184	555	1880	2434	70.0	0	True	NA	NA
PB.10696.23	chr7	+	1373	10	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	48833	1	any annotated donor/acceptor	FALSE	canonical	1	7067	junction_1	1072622.632177762	NA	2	1	TRUE	NA	NA	NA	B	coding	372	1119	90	1208	30.0	1	True	AAAAAG	-32
PB.10696.22	chr7	+	1475	11	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	48833	45	any annotated donor/acceptor	FALSE	canonical	1	2194	junction_2	1310568.688813406	NA	0	NA	TRUE	NA	NA	NA	B	coding	353	1062	205	1266	70.0	1	True	NA	NA
PB.11493.6	chr9	+	4081	20	novel_not_in_catalog	ACO1	novel	3618	22	NA	NA	47	2710	any annotated donor/acceptor	FALSE	canonical	1	20	junction_19	130190.33111372514	NA	1	NA	TRUE	NA	NA	NA	C	coding	799	2400	92	2491	80.0	16	True	NA	NA
PB.11493.4	chr9	+	3733	1	novel_in_catalog	ACO1	novel	3618	22	NA	NA	14	-62466	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	149	450	1228	1677	75.0	-17	True	NA	NA
PB.11493.5	chr9	+	4432	21	full-splice_match	ACO1	ENST00000309951.7	7466	21	23	3011	23	922	multi-exon	FALSE	canonical	1	243701	junction_1	91545.16860297706	NA	5	NA	TRUE	NA	NA	NA	C	coding	889	2670	116	2785	75.0	-8	True	NA	NA
PB.11493.2	chr9	+	3474	21	novel_not_in_catalog	ACO1	novel	3618	22	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	766	junction_5	129124.08069504307	NA	1	1	TRUE	NA	NA	NA	C	coding	680	2043	711	2753	30.0	-25	True	AATGAA	-20
PB.11493.3	chr9	+	3492	21	full-splice_match	ACO1	ENST00000309951.7	7466	21	37	3937	37	0	multi-exon	FALSE	canonical	1	243701	junction_1	91545.16860297706	NA	0	NA	TRUE	NA	NA	NA	C	coding	889	2670	102	2771	30.0	6	True	AATGAA	-20
PB.11493.1	chr9	+	3484	22	full-splice_match	ACO1	ENST00000379923.5	3601	22	15	102	15	-98	multi-exon	FALSE	canonical	1	17006	junction_2	145385.00445617177	NA	0	NA	TRUE	NA	NA	NA	C	coding	889	2670	192	2861	20.0	-16	True	CATAAA	-19
PB.3923.2	chr15	+	1940	13	novel_in_catalog	TRIP4	novel	636	5	NA	NA	0	-12	combination_of_known_junctions	TRUE	canonical	1	3366	junction_1	67637.04688240182	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	658	1713	35.0	-7	True	TATAAA	-9
PB.3923.3	chr15	+	2006	13	full-splice_match	TRIP4	ENST00000261884.7	2045	13	37	2	5	-2	multi-exon	FALSE	canonical	1	153690	junction_8	33111.551170080944	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	24	1769	20.0	-2	True	TATAAA	-19
PB.3923.1	chr15	+	1949	12	novel_in_catalog	TRIP4	novel	636	5	NA	NA	15	-2	combination_of_known_junctions	TRUE	canonical	1	5068	junction_5	68315.70118619864	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	1116	1712	20.0	-75	False	TATAAA	-19
PB.6646.4	chr2	+	4112	25	novel_not_in_catalog	INPP4A	novel	9996	26	NA	NA	6	1477	any annotated donor/acceptor	FALSE	canonical	1	2372	junction_24	55165.76351224452	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	388	3210	75.0	6	True	ATTAAA	-43
PB.3923.4	chr15	+	2087	13	novel_in_catalog	TRIP4	novel	636	5	NA	NA	7	-3	no_combination_of_known_junctions	FALSE	canonical	1	16720	junction_1	64397.154080492306	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	796	1851	20.0	0	True	TATAAA	-18
PB.3923.5	chr15	+	2035	14	novel_in_catalog	TRIP4	novel	636	5	NA	NA	9	-2	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	84811.44488094104	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	743	1798	20.0	2	True	TATAAA	-19
PB.10432.6	chr7	+	1703	8	novel_in_catalog	KLHL7	novel	616	3	NA	NA	0	347	combination_of_known_junctions	FALSE	canonical	1	33191	junction_7	118191.1031492331	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	243	1220	15.0	-24	True	AATAAA	-18
PB.10432.7	chr7	+	3009	11	full-splice_match	KLHL7	ENST00000339077.9	5620	11	3	2608	2	4	multi-exon	FALSE	canonical	1	190081	junction_7	73919.48803590295	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	241	2001	25.0	-22	True	AATAAA	-19
PB.10432.4	chr7	+	1527	6	incomplete-splice_match	KLHL7	ENST00000339077.9	5620	11	-19	33417	7	596	3prime_fragment	FALSE	canonical	1	230570	junction_4	77380.76731695027	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	263	1069	25.0	-44	True	NA	NA
PB.10432.5	chr7	+	3054	12	novel_not_in_catalog	KLHL7	novel	616	3	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	7981	junction_5	106188.67472250662	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	251	2050	25.0	-32	True	AATAAA	-15
PB.10432.2	chr7	+	3161	12	full-splice_match	KLHL7	ENST00000521082.5	3165	12	4	0	4	0	multi-exon	FALSE	canonical	1	35807	junction_1	116170.15464502033	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	463	2157	25.0	-47	True	AATAAA	-15
PB.10432.3	chr7	+	3144	11	full-splice_match	KLHL7	ENST00000339077.9	5620	11	-21	2497	5	29	multi-exon	FALSE	canonical	1	190081	junction_7	73919.48803590295	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	265	2025	35.0	-46	True	ATTAAA	-14
PB.10432.1	chr7	+	3277	12	full-splice_match	KLHL7	ENST00000521082.5	3165	12	3	-115	3	29	multi-exon	FALSE	canonical	1	35807	junction_1	116170.15464502033	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	464	2158	35.0	-48	True	ATTAAA	-14
PB.10563.1	chr7	+	5102	4	full-splice_match	ZNF107	ENST00000620827.4	5685	4	22	561	22	-2	multi-exon	FALSE	canonical	1	36454	junction_1	29621.1069678363	NA	3	NA	TRUE	NA	NA	NA	C	coding	852	2559	179	2737	35.0	-62	False	AATAAA	-14
PB.10563.3	chr7	+	5302	5	full-splice_match	ZNF107	ENST00000344930.7	5174	5	-75	-53	-10	53	multi-exon	FALSE	canonical	1	16621	junction_2	33761.435065581856	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	528	2879	40.0	-44	False	ATTAAA	-17
PB.10563.2	chr7	+	4226	3	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	21	-18750	any annotated donor/acceptor	FALSE	canonical	1	8566	junction_2	26099.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	1457	1966	20.0	-63	False	NA	NA
PB.10563.5	chr7	+	3276	3	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	-22	-19693	any annotated donor/acceptor	FALSE	canonical	1	8566	junction_2	26099.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1450	1959	15.0	-56	False	NA	NA
PB.10563.4	chr7	+	1842	1	novel_in_catalog	ZNF107	novel	5589	3	NA	NA	-23	-38628	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-57	False	AAGAAA	-20
PB.10563.7	chr7	+	3004	4	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	-20	-19693	any annotated donor/acceptor	FALSE	canonical	1	11755	junction_2	20742.04037429512	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1178	1687	15.0	-54	False	NA	NA
PB.10563.6	chr7	+	4091	4	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	-20	-18747	any annotated donor/acceptor	FALSE	canonical	1	8566	junction_2	21825.88540141168	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1319	1828	20.0	-54	False	NA	NA
PB.10563.9	chr7	+	5380	6	novel_in_catalog	ZNF107	novel	5589	3	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	1	4714	junction_2	38899.548467302295	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	655	3006	25.0	-44	False	AATAAA	-23
PB.10563.8	chr7	+	3137	4	novel_not_in_catalog	ZNF107	novel	5589	3	NA	NA	-13	-19694	any annotated donor/acceptor	FALSE	canonical	1	8566	junction_2	21825.88540141168	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1312	1821	20.0	0	True	NA	NA
PB.10092.8	chr6	-	6355	12	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-28625	-50360	no_combination_of_known_junctions	FALSE	canonical	1	28014	junction_11	358520.1212733181	NA	4	NA	TRUE	NA	NA	NA	B	coding	562	1689	123	1811	25.0	7	True	AATAAA	-14
PB.9667.28	chr5	+	4069	14	novel_in_catalog	CANX	novel	585	5	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	12171	junction_11	1666827.231645821	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	130	1788	15.0	-5	True	ATTAAA	-18
PB.7155.1	chr20	+	1853	7	full-splice_match	PANK2	ENST00000610179.5	1807	7	-30	-16	-2	16	multi-exon	FALSE	canonical	1	177003	junction_2	82772.24366228627	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	86	1429	15.0	-2	True	NA	NA
PB.470.17	chr1	+	2625	13	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-10	-7	intron_retention	FALSE	canonical	1	64753	junction_2	644813.7843351236	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	939	1820	75.0	6	True	NA	NA
PB.6851.28	chr2	-	3192	14	full-splice_match	ATF2	ENST00000264110.6	4176	14	38	946	0	-931	multi-exon	FALSE	canonical	1	239115	junction_9	79357.56893942965	NA	3	NA	TRUE	NA	NA	NA	C	coding	505	1518	262	1779	60.0	31	True	AATACA	-12
PB.4858.1	chr17	+	537	5	full-splice_match	RPL23A	ENST00000422514.6	1562	5	601	424	3	-1	multi-exon	FALSE	canonical	1	34005	junction_2	1816931.8237292746	NA	0	NA	TRUE	NA	NA	NA	A	coding	156	471	13	483	25.0	-8796	False	NA	NA
PB.7205.1	chr20	+	1053	2	full-splice_match	NXT1	ENST00000254998.2	1123	2	64	6	64	-6	multi-exon	FALSE	canonical	1	218508	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	140	423	324	746	10.0	1	True	AATACA	-14
PB.8590.1	chr3	-	2932	1	antisense	novelGene_ST6GAL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	119	360	2262	2621	95.0	NA	False	NA	NA
PB.8164.3	chr3	-	4158	8	novel_in_catalog	WDR82	novel	4293	9	NA	NA	16	-21	no_combination_of_known_junctions	FALSE	canonical	1	14538	junction_7	170740.60173567745	NA	3	NA	TRUE	NA	NA	NA	C	coding	233	702	409	1110	35.0	17	True	NA	NA
PB.9416.20	chr5	+	4272	13	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	2	-272	combination_of_known_junctions	FALSE	canonical	1	26844	junction_11	93524.62182357679	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	557	1900	20.0	-6	True	NA	NA
PB.9416.21	chr5	+	2878	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	129	142	combination_of_known_junctions	FALSE	canonical	1	65772	junction_1	66229.41761523267	NA	2	1	TRUE	NA	NA	NA	C	coding	415	1248	430	1677	75.0	-58	False	NA	NA
PB.7185.6	chr20	-	3007	22	novel_not_in_catalog	RRBP1	novel	2200	6	NA	NA	375	-1377	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	273148.1296738327	NA	0	NA	TRUE	NA	NA	NA	B	coding	666	1998	1009	3006	45.0	878	False	NA	NA
PB.2246.9	chr11	+	3644	9	full-splice_match	BIRC2	ENST00000227758.6	3743	9	92	7	-47	0	multi-exon	FALSE	canonical	1	304058	junction_1	111853.43770756444	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	1422	3164	45.0	-7640	False	AATAAA	-8
PB.2246.8	chr11	+	5082	7	novel_in_catalog	BIRC2	novel	709	3	NA	NA	-3	10	intron_retention	FALSE	canonical	1	487064	junction_4	65403.63567536254	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	3743	4585	20.0	7	True	AATAAA	-25
PB.3808.1	chr15	-	2160	1	novel_in_catalog	AC018362.1	novel	2768	4	NA	NA	7058	9003	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2246.5	chr11	+	2904	7	incomplete-splice_match	BIRC2	ENST00000227758.6	3743	9	-17	1053	1	20	3prime_fragment	FALSE	canonical	1	304058	junction_1	118289.16414542045	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1374	1531	2904	65.0	4	True	AATAAA	-19
PB.2246.4	chr11	+	3883	10	novel_not_in_catalog	BIRC2	novel	709	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	289	junction_1	248021.6683739299	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	1661	3403	45.0	4	True	AATAAA	-8
PB.2246.7	chr11	+	2514	10	novel_in_catalog	BIRC2	novel	709	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	3255	junction_2	200222.86871741724	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	325	2034	45.0	7	True	AATAAA	-8
PB.2246.6	chr11	+	2267	11	novel_not_in_catalog	BIRC2	novel	709	3	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	2815	junction_3	238354.22719817664	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	418	1788	40.0	4	True	AATAAA	-7
PB.2246.1	chr11	+	3852	8	novel_in_catalog	BIRC2	novel	709	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	304058	junction_1	117905.76912993888	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	2530	3372	45.0	-1	True	AATAAA	-8
PB.7678.4	chr22	+	2978	5	full-splice_match	CCDC117	ENST00000249064.8	3985	5	21	986	-9	-986	multi-exon	FALSE	canonical	1	138616	junction_2	90967.9116732241	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	156	995	45.0	-50	True	AATAAA	-12
PB.2246.3	chr11	+	2735	6	incomplete-splice_match	BIRC2	ENST00000227758.6	3743	9	-18	10170	0	4821	3prime_fragment	FALSE	canonical	1	304058	junction_1	128580.62929943997	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1203	1532	2734	65.0	3	True	TATAAA	-44
PB.2246.2	chr11	+	2643	10	full-splice_match	BIRC2	ENST00000532672.5	2617	10	-32	6	1	0	multi-exon	FALSE	canonical	1	5137	junction_2	199720.34240673063	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	421	2163	45.0	1	True	AATAAA	-8
PB.10448.5	chr7	+	2918	5	incomplete-splice_match	CBX3	ENST00000337620.8	2128	6	620	-1	17	1	5prime_fragment	FALSE	canonical	1	212104	junction_3	491874.64766493096	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	1218	1769	20.0	1	True	AATAAA	-25
PB.10448.4	chr7	+	3419	2	novel_not_in_catalog	CBX3	novel	2128	6	NA	NA	-8	-2044	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.10448.7	chr7	+	1900	1	novel_in_catalog	CBX3	novel	2128	6	NA	NA	1045	495	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	225	False	NA	NA
PB.7185.5	chr20	-	3267	24	novel_not_in_catalog	RRBP1	novel	2200	6	NA	NA	432	36	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	267522.41346845106	NA	2	NA	TRUE	NA	NA	NA	B	coding	751	2256	922	3177	20.0	935	False	AATAAA	-22
PB.10448.1	chr7	+	1843	6	full-splice_match	CBX3	ENST00000337620.8	2128	6	283	2	-248	-2	multi-exon	FALSE	canonical	1	147423	junction_1	485759.7150923901	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	146	697	25.0	0	True	AATAAA	-22
PB.10448.3	chr7	+	1771	6	full-splice_match	CBX3	ENST00000396386.6	1857	6	89	-3	17	-2	multi-exon	FALSE	canonical	1	212104	junction_4	686868.9478829567	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	74	625	25.0	1	True	AATAAA	-22
PB.10448.2	chr7	+	2021	6	full-splice_match	CBX3	ENST00000396386.6	1857	6	92	-256	20	251	multi-exon	FALSE	canonical	1	212104	junction_4	686868.9478829567	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	71	622	10.0	4	True	ATTAAA	-19
PB.11686.6	chr9	-	1533	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	38	3283	38	-3283	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	163	1383	40.0	-3	True	AATAAA	-43
PB.7155.3	chr20	+	2030	5	incomplete-splice_match	PANK2	ENST00000610179.5	1807	7	-49	5893	-21	759	3prime_fragment	FALSE	canonical	1	177003	junction_2	97961.04553692503	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	132	1295	20.0	1	True	ATTAAA	-17
PB.11686.4	chr9	-	2011	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	28	2815	28	-2815	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	173	1393	75.0	-13	True	NA	NA
PB.11686.5	chr9	-	1868	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	28	2958	28	-2958	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	173	1393	15.0	-13	True	AATAAA	-19
PB.11686.2	chr9	-	2796	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	28	2030	28	-2030	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	3	NA	TRUE	NA	NA	NA	C	coding	406	1221	173	1393	35.0	-13	True	AATAAA	-13
PB.11686.3	chr9	-	2680	12	full-splice_match	ERP44	ENST00000262455.6	4854	12	40	2134	40	-2134	multi-exon	FALSE	canonical	1	265729	junction_2	235752.8454490822	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	161	1381	25.0	-1	True	AATAAA	-20
PB.6297.1	chr2	+	1294	3	full-splice_match	ID2	ENST00000396290.1	1362	3	73	-5	0	3	multi-exon	FALSE	canonical	1	879225	junction_1	416628.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	134	405	111	515	15.0	0	True	AATAAA	-20
PB.8164.9	chr3	-	3419	9	novel_not_in_catalog	WDR82	novel	4293	9	NA	NA	16	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	184710.73418553502	NA	2	NA	TRUE	NA	NA	NA	C	coding	233	702	409	1110	95.0	17	True	NA	NA
PB.3872.9	chr15	+	2493	6	full-splice_match	MAPK6	ENST00000261845.6	5345	6	28	2824	-9	-2824	multi-exon	FALSE	canonical	1	166374	junction_1	43925.7767767401	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1713	780	2492	70.0	0	True	NA	NA
PB.3872.8	chr15	+	3557	6	full-splice_match	MAPK6	ENST00000261845.6	5345	6	28	1760	-9	-1760	multi-exon	FALSE	canonical	1	166374	junction_1	43925.7767767401	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	780	2945	25.0	0	True	AATAAA	-18
PB.6880.25	chr2	+	5079	27	incomplete-splice_match	ITGA4	ENST00000397033.6	4189	28	1005	-1551	-11	1551	5prime_fragment	FALSE	canonical	1	236407	junction_4	89779.53429137092	NA	2	NA	TRUE	NA	NA	NA	C	coding	820	2463	406	2868	60.0	8	True	AATAAA	-8
PB.1593.1	chr10	-	6510	18	novel_not_in_catalog	DNMBP	novel	4178	14	NA	NA	-28	0	intron_retention	FALSE	canonical	1	12751	junction_17	54654.66432948663	NA	0	NA	TRUE	NA	NA	NA	C	coding	1577	4734	203	4936	10.0	-35	True	AATAAA	-16
PB.3872.4	chr15	+	4182	7	novel_in_catalog	MAPK6	novel	552	3	NA	NA	14	-1229	combination_of_known_junctions	FALSE	canonical	1	6303	junction_1	108060.12890580359	NA	3	1	TRUE	NA	NA	NA	C	coding	721	2166	874	3039	20.0	-14	True	AATAAA	-15
PB.3872.7	chr15	+	4087	6	novel_not_in_catalog	MAPK6	novel	552	3	NA	NA	-9	-1214	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	99156.69736654202	NA	2	1	TRUE	NA	NA	NA	C	coding	481	1446	1484	2929	20.0	0	True	AATAAA	-30
PB.3872.6	chr15	+	4090	6	full-splice_match	MAPK6	ENST00000261845.6	5345	6	26	1229	-11	-1229	multi-exon	FALSE	canonical	1	166374	junction_1	43925.7767767401	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	782	2947	20.0	-2	True	AATAAA	-15
PB.3872.1	chr15	+	2269	6	full-splice_match	MAPK6	ENST00000261845.6	5345	6	16	3060	16	-3060	multi-exon	FALSE	canonical	1	166374	junction_1	43925.7767767401	NA	3	NA	TRUE	NA	NA	NA	C	coding	492	1476	792	2267	50.0	-12	True	AAGAAA	-23
PB.8773.24	chr4	+	2658	11	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	2	1045	any annotated donor/acceptor	FALSE	canonical	1	4946	junction_1	103273.03516910889	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	205	903	45.0	390	False	AATAAA	-11
PB.3872.3	chr15	+	4231	6	novel_not_in_catalog	MAPK6	novel	552	3	NA	NA	14	-1114	any annotated donor/acceptor	FALSE	canonical	1	6992	junction_1	96284.72901556092	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	808	2973	30.0	-14	True	AATAAA	-12
PB.3872.2	chr15	+	4206	7	novel_not_in_catalog	MAPK6	novel	552	3	NA	NA	4	-1229	any annotated donor/acceptor	FALSE	canonical	1	141	junction_1	109514.51027362641	NA	2	NA	TRUE	NA	NA	NA	C	coding	721	2166	898	3063	20.0	-2237	False	AATAAA	-15
PB.442.1	chr1	+	3236	11	full-splice_match	NFIA	ENST00000403491.7	9487	11	253	5998	-60	401	multi-exon	FALSE	canonical	1	112550	junction_3	20179.521204676785	NA	3	NA	TRUE	NA	NA	NA	C	coding	509	1530	232	1761	90.0	-60	True	AAAAAG	-31
PB.7074.9	chr2	+	3533	7	novel_in_catalog	EIF4E2	novel	1604	7	NA	NA	260	-3	intron_retention	FALSE	canonical	1	32150	junction_1	367337.3969385033	NA	14	NA	TRUE	NA	NA	NA	C	coding	229	690	148	837	30.0	-23	True	AATAAA	-15
PB.9770.2	chr6	+	4876	8	full-splice_match	RNF144B	ENST00000259939.3	5036	8	153	7	-11	-7	multi-exon	FALSE	canonical	1	82402	junction_4	17960.457700635765	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	165	1076	35.0	24	True	AATAAA	-11
PB.12317.6	chrX	-	1852	4	full-splice_match	MAGEA2	ENST00000595583.5	1830	4	-12	-10	-6	-2	multi-exon	FALSE	canonical	1	63	junction_3	331.3497648507792	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	355	1299	15.0	NA	False	AATAAA	-14
PB.12317.7	chrX	+	3976	1	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	0	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	314	945	2480	3424	15.0	NA	False	AATAAA	-13
PB.8490.4	chr3	-	3074	9	novel_in_catalog	VEPH1	novel	3979	13	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	2708	junction_8	10052.52204362169	NA	0	NA	TRUE	NA	NA	NA	B	coding	515	1548	138	1685	25.0	NA	False	NA	NA
PB.12317.1	chrX	-	2165	6	novel_in_catalog	MAGEA2	novel	1947	5	NA	NA	27	-9	intron_retention	FALSE	canonical	0	0	junction_5	305.32841335191847	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	687	1631	35.0	NA	False	ATTAAA	-5
PB.12317.2	chrX	+	1935	5	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	62	junction_2	482.1340581207679	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	436	1380	20.0	NA	False	AATAAA	-16
PB.12317.3	chrX	+	3924	2	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1197	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	2426	3370	15.0	NA	False	AATAAA	-15
PB.7211.2	chr20	+	3876	12	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-2	-16	intron_retention	FALSE	canonical	1	62183	junction_1	188841.49106364444	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	456	989	5.0	-37	True	AATAAA	-13
PB.7211.3	chr20	+	2541	12	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	2	2	no_combination_of_known_junctions	FALSE	canonical	1	5682	junction_8	236861.80106261984	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	204	1325	15.0	-33	True	AATAAA	-31
PB.7211.1	chr20	+	2596	13	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-6	-16	combination_of_known_junctions	TRUE	canonical	1	66446	junction_9	217976.60406063203	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	212	1480	5.0	-41	True	AATAAA	-13
PB.12317.8	chrX	-	2106	7	novel_in_catalog	MAGEA2	novel	1947	5	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	303.3723875957658	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	610	1554	15.0	NA	False	AATAAA	-13
PB.12317.9	chrX	+	1991	6	novel_in_catalog	MAGEA2B	novel	1946	5	NA	NA	4	-10	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	459.1066978383129	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	502	1446	10.0	NA	False	AATAAA	-6
PB.7211.4	chr20	+	2408	13	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-3	-16	combination_of_known_junctions	FALSE	canonical	1	62183	junction_1	207256.8662357273	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	449	1210	5.0	-30	True	AATAAA	-13
PB.7211.5	chr20	+	4190	13	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-2	-16	intron_retention	FALSE	canonical	1	76782	junction_1	180409.93333399462	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	200	1303	5.0	-29	True	AATAAA	-13
PB.8331.1	chr3	+	3309	5	full-splice_match	GTF2E1	ENST00000283875.5	3012	5	0	-297	0	297	multi-exon	FALSE	canonical	1	134221	junction_1	7902.27120437536	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	94	1413	40.0	-12	True	AATAAA	-16
PB.8331.2	chr3	+	3011	5	full-splice_match	GTF2E1	ENST00000283875.5	3012	5	2	-1	2	1	multi-exon	FALSE	canonical	1	134221	junction_1	7902.27120437536	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	92	1411	25.0	-10	True	AATAAA	-17
PB.6512.14	chr2	+	2686	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	78	1097	-2	10	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	80	1264	55.0	0	True	AATAAA	-25
PB.2160.2	chr11	+	2199	2	full-splice_match	AP001372.2	ENST00000526036.1	2493	2	4	290	4	159	multi-exon	FALSE	canonical	1	22049	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	991	2040	15.0	-10	True	NA	NA
PB.2160.3	chr11	+	2130	2	full-splice_match	AP001372.2	ENST00000526036.1	2493	2	405	-42	405	42	multi-exon	FALSE	canonical	1	22049	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	461	1639	85.0	-73	False	NA	NA
PB.2160.1	chr11	+	2040	2	novel_not_in_catalog	AP001372.2	novel	2493	2	NA	NA	-3	160	any annotated donor/acceptor	FALSE	canonical	1	2560	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	831	1880	15.0	-17	True	NA	NA
PB.11413.6	chr8	+	2090	4	full-splice_match	ZNF7	ENST00000544249.2	2125	4	32	3	-5	-1	multi-exon	FALSE	canonical	1	9386	junction_2	66792.85253345268	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	267	2039	30.0	-10	True	AATAAA	-16
PB.8936.4	chr4	-	2916	5	full-splice_match	ELOVL6	ENST00000394607.7	6454	5	1	3537	1	4	multi-exon	FALSE	canonical	1	74966	junction_4	54162.1777182888	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	170	961	35.0	0	True	AATAAA	-21
PB.11413.4	chr8	+	2221	5	full-splice_match	ZNF7	ENST00000532777.5	915	5	83	-1389	-8	0	multi-exon	FALSE	canonical	1	72335	junction_2	40082.9762898166	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	109	2169	30.0	-13	True	AATAAA	-17
PB.11413.5	chr8	+	2048	3	novel_in_catalog	ZNF7	novel	915	5	NA	NA	-6	2	no_combination_of_known_junctions	FALSE	canonical	1	18418	junction_1	77266.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	220	1992	30.0	-11	True	AATAAA	-21
PB.11413.2	chr8	+	2260	5	full-splice_match	ZNF7	ENST00000446747.6	2242	5	-18	0	-14	0	multi-exon	FALSE	canonical	1	13046	junction_2	56667.27000383467	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	115	2208	30.0	-19	True	AATAAA	-17
PB.11413.3	chr8	+	2274	5	full-splice_match	ZNF7	ENST00000529767.5	546	5	-33	-1695	-11	-1	multi-exon	FALSE	canonical	1	2734	junction_2	60206.52817334263	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	112	2223	30.0	-16	True	AATAAA	-16
PB.8936.3	chr4	-	2962	4	novel_not_in_catalog	ELOVL6	novel	6454	5	NA	NA	1311	4	any annotated donor/acceptor	FALSE	canonical	1	2339	junction_3	94309.60681476493	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	360	1007	35.0	-12	True	AATAAA	-21
PB.8936.2	chr4	-	2847	4	full-splice_match	ELOVL6	ENST00000302274.7	3090	4	247	-4	-63	4	multi-exon	FALSE	canonical	1	194052	junction_3	6144.735795784876	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	101	892	35.0	757	False	AATAAA	-21
PB.11625.26	chr9	-	2696	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	17	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	903013.0801407194	NA	2	1	TRUE	NA	NA	NA	B	coding	438	1317	210	1526	20.0	-13	True	AATAAA	-18
PB.11413.8	chr8	+	2400	3	novel_in_catalog	ZNF7	novel	915	5	NA	NA	0	-185	no_combination_of_known_junctions	FALSE	canonical	1	18418	junction_1	77266.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	209	1981	100.0	0	True	NA	NA
PB.11413.9	chr8	+	2962	4	full-splice_match	ZNF7	ENST00000532382.5	855	4	5	-2112	0	-185	multi-exon	FALSE	canonical	1	83758	junction_2	41111.249655322106	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	420	2543	100.0	0	True	NA	NA
PB.7105.2	chr2	+	1368	2	full-splice_match	GPR35	ENST00000407714.1	1258	2	260	-370	260	-1	multi-exon	FALSE	canonical	1	17587	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	69	998	10.0	-2	True	AATAAA	-18
PB.7105.1	chr2	+	3300	2	full-splice_match	GPR35	ENST00000407714.1	1258	2	235	-2277	235	1900	multi-exon	FALSE	canonical	1	17587	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	309	930	94	1023	10.0	-27	True	NA	NA
PB.6733.10	chr2	-	4521	9	novel_not_in_catalog	AMMECR1L	novel	4658	8	NA	NA	-33	-298	any annotated donor/acceptor	FALSE	canonical	1	18080	junction_3	57440.72282348452	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	295	1362	35.0	-1588	False	AATAAA	-13
PB.2803.20	chr12	+	3654	6	novel_not_in_catalog	NUDT4	novel	9753	5	NA	NA	91	-46	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	741.0730058503008	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	389	778	70.0	-649	False	NA	NA
PB.2803.22	chr12	+	3538	5	full-splice_match	NUDT4	ENST00000549992.5	3607	5	23	46	-5	-46	multi-exon	FALSE	canonical	1	109	junction_4	6278.064948692391	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	276	662	70.0	-5	True	NA	NA
PB.2803.25	chr12	+	3188	2	incomplete-splice_match	NUDT4	ENST00000549992.5	3607	5	20209	34	20105	-34	5prime_fragment	FALSE	canonical	1	109	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	1	300	45.0	NA	False	AATAAA	-6
PB.12286.3	chrX	+	2876	20	novel_not_in_catalog	SAGE1	novel	2952	20	NA	NA	-2527	0	any annotated donor/acceptor	FALSE	canonical	1	704	junction_9	5301.313317656933	NA	0	NA	TRUE	NA	NA	NA	B	coding	875	2628	86	2713	5.0	0	True	AATAAA	-21
PB.12286.2	chrX	+	3041	20	novel_not_in_catalog	SAGE1	novel	2952	20	NA	NA	-2630	-6	any annotated donor/acceptor	FALSE	canonical	1	1835	junction_1	4751.052967413537	NA	0	NA	TRUE	NA	NA	NA	B	coding	904	2715	170	2884	10.0	-103	False	AATAAA	-15
PB.12286.1	chrX	+	3103	20	novel_not_in_catalog	SAGE1	novel	2952	20	NA	NA	-2667	0	any annotated donor/acceptor	FALSE	canonical	1	1550	junction_1	4780.234533357732	NA	0	NA	TRUE	NA	NA	NA	B	coding	904	2715	226	2940	5.0	-140	False	AATAAA	-21
PB.648.3	chr1	-	2885	14	full-splice_match	GDAP2	ENST00000369443.9	8828	14	13	5930	13	769	multi-exon	FALSE	canonical	1	55174	junction_13	29683.95485999427	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	238	1731	15.0	3	True	AATATA	-43
PB.648.4	chr1	-	2691	12	novel_in_catalog	GDAP2	novel	8828	14	NA	NA	0	763	no_combination_of_known_junctions	FALSE	canonical	1	1875	junction_4	46958.11607668129	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	204	1181	25.0	-6	True	AATAAA	-41
PB.4986.1	chr17	-	1764	7	novel_in_catalog	AC099811.2	novel	646	5	NA	NA	-80	-5305	no_combination_of_known_junctions	FALSE	canonical	1	7582	junction_5	1018963.486217803	NA	0	NA	TRUE	NA	NA	NA	A	coding	216	651	310	960	10.0	-8	True	AATATA	-23
PB.4986.2	chr17	-	1638	6	full-splice_match	RAB5C	ENST00000346213.8	1671	6	29	4	0	-2	multi-exon	FALSE	canonical	1	1125132	junction_5	537048.2962167928	NA	0	NA	TRUE	NA	NA	NA	A	coding	216	651	185	835	15.0	0	True	AATATA	-22
PB.648.7	chr1	-	3184	8	incomplete-splice_match	GDAP2	ENST00000369442.3	2436	13	-39	17622	8	1772	3prime_fragment	FALSE	canonical	1	55174	junction_7	32658.898817308334	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	243	1199	35.0	-2	True	NA	NA
PB.3986.1	chr15	+	3354	7	full-splice_match	SCAMP5	ENST00000425597.7	3411	7	59	-2	-7	2	multi-exon	FALSE	canonical	1	99351	junction_1	97976.09269102335	NA	3	NA	TRUE	NA	NA	NA	A	coding	235	708	132	839	5.0	2	True	AATAAA	-24
PB.12307.2	chrX	+	4833	8	full-splice_match	MAMLD1	ENST00000370401.6	4854	8	12	9	12	0	multi-exon	FALSE	canonical	1	9337	junction_1	15991.611358357064	NA	2	NA	TRUE	NA	NA	NA	C	coding	774	2325	299	2623	25.0	18	True	AATAAA	-11
PB.12307.1	chrX	+	3502	5	novel_not_in_catalog	MAMLD1	novel	699	3	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	11706.961355855754	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	316	2406	25.0	1	True	AATAAA	-11
PB.621.8	chr1	-	3164	5	novel_not_in_catalog	SLC16A1	novel	3910	5	NA	NA	-14	-511	any annotated donor/acceptor	FALSE	canonical	1	2221	junction_1	334639.37809640693	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	206	1636	35.0	-1	True	AATAAA	-9
PB.11445.9	chr9	+	4392	5	full-splice_match	MLANA	ENST00000381471.1	1000	5	-25	-3367	-11	1706	multi-exon	FALSE	canonical	1	6584	junction_1	122200.54769926361	NA	6	NA	TRUE	NA	NA	NA	C	coding	118	357	432	788	45.0	4	True	NA	NA
PB.7119.1	chr2	-	2110	5	full-splice_match	PDCD1	ENST00000334409.9	2114	5	3	1	3	-1	multi-exon	FALSE	canonical	1	17174	junction_4	3147.560205937291	NA	0	NA	TRUE	NA	NA	NA	A	coding	288	867	68	934	5.0	-17	True	ATTAAA	-19
PB.3599.18	chr14	-	5988	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	10	1927	-2	-1927	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	2	NA	TRUE	NA	NA	NA	C	coding	794	2385	108	2492	70.0	-7	True	AAGAAA	-44
PB.4041.6	chr15	-	2413	8	full-splice_match	BTBD1	ENST00000261721.8	3297	8	113	771	-90	768	multi-exon	FALSE	canonical	1	425096	junction_7	188787.22349756182	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	91	1539	30.0	10	True	AATAAA	-15
PB.4041.7	chr15	-	2252	8	full-splice_match	BTBD1	ENST00000261721.8	3297	8	114	931	-89	608	multi-exon	FALSE	canonical	1	425096	junction_7	188787.22349756182	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	90	1538	40.0	11	True	TATAAA	-27
PB.4041.4	chr15	-	3079	7	novel_in_catalog	BTBD1	novel	3297	8	NA	NA	-101	-10	combination_of_known_junctions	FALSE	canonical	1	32135	junction_5	339924.7485802311	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	833	1444	45.0	-1	True	TTTAAA	-23
PB.4041.5	chr15	-	3025	7	novel_in_catalog	BTBD1	novel	3297	8	NA	NA	-89	-11	no_combination_of_known_junctions	FALSE	canonical	1	7621	junction_1	259359.78844368987	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	90	1391	50.0	11	True	TTTAAA	-22
PB.4041.2	chr15	-	3184	8	full-splice_match	BTBD1	ENST00000261721.8	3297	8	103	10	-100	-10	multi-exon	FALSE	canonical	1	425096	junction_7	188787.22349756182	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	101	1549	45.0	0	True	TTTAAA	-23
PB.4041.3	chr15	-	3180	8	novel_in_catalog	BTBD1	novel	3297	8	NA	NA	-89	-10	combination_of_known_junctions	FALSE	canonical	1	27634	junction_4	417774.53945702646	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1096	1545	45.0	11	True	TTTAAA	-23
PB.5670.11	chr19	+	3361	11	full-splice_match	MAP2K7	ENST00000397979.3	3361	11	-1	1	-1	-1	multi-exon	FALSE	canonical	1	104610	junction_1	94278.74365221463	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	56	1315	15.0	13	True	AATAAA	-18
PB.4041.1	chr15	-	3289	9	novel_in_catalog	BTBD1	novel	3297	8	NA	NA	-91	-9	combination_of_known_junctions	FALSE	canonical	1	27634	junction_4	359603.20056174416	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	92	1156	45.0	9	True	TTTAAA	-24
PB.9900.1	chr6	+	1483	1	novel_in_catalog	HLA-DRA	novel	1280	5	NA	NA	9	-3677	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.11538.15	chr9	+	2344	17	full-splice_match	MELK	ENST00000541717.4	2363	17	16	3	15	-1	multi-exon	FALSE	canonical	1	58120	junction_12	105779.7301655773	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	169	2001	10.0	-19	True	AATAAA	-15
PB.5547.4	chr19	+	2032	3	full-splice_match	FSTL3	ENST00000605925.3	748	3	0	-1284	0	-1	multi-exon	FALSE	canonical	1	1223	junction_1	172597.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	1343	1858	10.0	-1	True	AATAAA	-14
PB.5547.5	chr19	+	2163	2	incomplete-splice_match	FSTL3	ENST00000592947.5	2144	3	427	7	383	-7	5prime_fragment	FALSE	canonical	1	346417	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	171	516	1480	1995	10.0	-1711	False	AATAAA	-8
PB.9900.5	chr6	+	5151	1	novel_in_catalog	HLA-DRA	novel	1280	5	NA	NA	15	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	120	363	3271	3633	20.0	6	True	AATAAA	-22
PB.5547.3	chr19	+	2099	3	full-splice_match	FSTL3	ENST00000592947.5	2144	3	44	1	0	-1	multi-exon	FALSE	canonical	1	15260	junction_1	165578.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	1410	1925	10.0	-1	True	AATAAA	-14
PB.4041.8	chr15	-	2132	8	full-splice_match	BTBD1	ENST00000261721.8	3297	8	103	1062	-100	477	multi-exon	FALSE	canonical	1	425096	junction_7	188787.22349756182	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	101	1549	40.0	0	True	AATAAA	-24
PB.4041.9	chr15	-	2467	2	incomplete-splice_match	BTBD1	ENST00000379403.2	1467	7	-101	36620	-101	-25038	3prime_fragment	FALSE	canonical	1	425096	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	102	677	95.0	-1	True	NA	NA
PB.2881.1	chr12	+	1813	11	novel_in_catalog	USP30	novel	2483	16	NA	NA	-16	-3	intron_retention	FALSE	canonical	1	7613	junction_1	42434.250984788225	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	261	1370	40.0	-24	True	ATTAAA	-14
PB.2881.2	chr12	+	2105	13	full-splice_match	USP30	ENST00000257548.9	3742	13	-15	1652	-15	-3	multi-exon	FALSE	canonical	1	55341	junction_1	32055.336414810354	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	109	1662	40.0	-23	True	ATTAAA	-14
PB.2881.3	chr12	+	1950	13	full-splice_match	USP30	ENST00000257548.9	3742	13	-13	1805	-13	-103	multi-exon	FALSE	canonical	1	55341	junction_1	32055.336414810354	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	107	1660	25.0	-21	True	ATTAAA	-17
PB.2881.4	chr12	+	3447	11	novel_in_catalog	USP30	novel	2483	16	NA	NA	-8	-7	intron_retention	FALSE	canonical	1	7613	junction_1	42434.250984788225	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	253	1362	40.0	-16	True	AATAAA	-17
PB.2881.5	chr12	+	3724	13	full-splice_match	USP30	ENST00000257548.9	3742	13	8	10	3	-7	multi-exon	FALSE	canonical	1	55341	junction_1	32055.336414810354	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	86	1639	40.0	0	True	AATAAA	-17
PB.2881.6	chr12	+	3541	12	novel_in_catalog	USP30	novel	2483	16	NA	NA	3	-7	intron_retention	FALSE	canonical	1	8224	junction_2	43899.44944646207	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	86	1456	40.0	0	True	AATAAA	-17
PB.7174.1	chr20	-	5963	26	full-splice_match	JAG1	ENST00000254958.10	5940	26	-22	-1	-22	1	multi-exon	FALSE	canonical	1	159054	junction_25	97926.140468547	NA	2	NA	TRUE	NA	NA	NA	C	coding	1218	3657	492	4148	20.0	15	False	AATAAA	-21
PB.5501.12	chr18	-	4611	14	novel_not_in_catalog	LMAN1	novel	5521	13	NA	NA	-6	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	275527.9406045332	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	28	1560	20.0	-18	True	AATAAA	-13
PB.6802.50	chr2	-	1681	2	full-splice_match	LY75	ENST00000492955.1	1402	2	-5	-274	-5	274	multi-exon	FALSE	canonical	1	22116	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	1	True	AATAAA	-23
PB.11282.5	chr8	-	10867	59	novel_in_catalog	UBR5	novel	10297	59	NA	NA	-9	731	combination_of_known_junctions	FALSE	canonical	1	98900	junction_51	156236.74461675886	NA	13	2	TRUE	NA	NA	NA	C	coding	2793	8382	465	8846	35.0	1	True	AATAAA	-8
PB.672.3	chr1	+	4106	13	novel_in_catalog	GPR89A	novel	1955	14	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	249	750	114	863	20.0	NA	False	ATTAAA	-13
PB.672.2	chr1	+	2866	14	full-splice_match	GPR89A	ENST00000313835.13	2120	14	28	-774	-1	774	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	455	1368	117	1484	20.0	NA	False	AATAAA	-13
PB.7026.3	chr2	+	1670	8	full-splice_match	STK16	ENST00000396738.6	1673	8	17	-14	-11	2	multi-exon	FALSE	canonical	1	66730	junction_1	117823.30148080528	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	406	1323	15.0	-2	True	AATAAA	-21
PB.672.5	chr1	+	1874	14	full-splice_match	GPR89A	ENST00000313835.13	2120	14	57	189	-1	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	88	1455	20.0	NA	False	ATTAAA	-12
PB.672.4	chr1	+	3648	14	novel_in_catalog	GPR89A	novel	1955	14	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	2569	3228	20.0	NA	False	ATTAAA	-13
PB.7010.1	chr2	-	6026	10	novel_in_catalog	ZNF142	novel	5909	10	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	1	29013	junction_6	53769.68277963171	NA	0	NA	TRUE	NA	NA	NA	B	coding	1687	5064	549	5612	45.0	52	False	TATAAA	-8
PB.7010.2	chr2	-	6360	11	novel_in_catalog	ZNF142	novel	5909	10	NA	NA	49	-2	combination_of_known_junctions	FALSE	canonical	1	16427	junction_10	53776.31436980411	NA	0	NA	TRUE	NA	NA	NA	B	coding	1887	5664	505	6168	20.0	1	True	TATAAA	-18
PB.9635.7	chr5	+	4352	10	novel_in_catalog	FAF2	novel	684	3	NA	NA	27	-1	no_combination_of_known_junctions	FALSE	canonical	1	8531	junction_2	122880.27456566547	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	27	1229	25.0	-3	True	ATTAAA	-21
PB.3799.1	chr15	+	3772	19	full-splice_match	TYRO3	ENST00000263798.7	8207	19	184	4251	-9	-3	multi-exon	TRUE	canonical	1	34874	junction_9	65398.97409870877	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	59	2713	10.0	0	True	AATAAA	-18
PB.973.1	chr1	-	2456	18	antisense	novelGene_CACNA1E_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	6.117647058823533	NA	5	5	TRUE	NA	NA	NA	A	coding	137	414	192	605	95.0	NA	False	NA	NA
PB.1109.20	chr1	+	3385	15	novel_not_in_catalog	DTL	novel	4471	14	NA	NA	-56	-164	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	78450.35850742734	NA	2	NA	TRUE	NA	NA	NA	C	coding	476	1431	102	1532	10.0	-3	True	AATAAA	-11
PB.6406.9	chr2	+	2019	1	novel_in_catalog	RASGRP3	novel	4738	19	NA	NA	3	-3396	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	3	True	NA	NA
PB.6406.8	chr2	+	2359	14	incomplete-splice_match	RASGRP3	ENST00000403687.7	4807	18	24	14879	24	6225	3prime_fragment	FALSE	canonical	1	119975	junction_7	32551.817444602777	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	717	2294	50.0	1	True	AATAAA	-17
PB.2057.11	chr11	+	2552	17	novel_in_catalog	SCYL1	novel	2642	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	45527	junction_16	233873.84759816795	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	43	2388	5.0	14	True	AATAAA	-13
PB.2057.10	chr11	+	2709	17	novel_in_catalog	SCYL1	novel	2642	18	NA	NA	11	-1	intron_retention	FALSE	canonical	1	365587	junction_1	161750.26146496448	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	59	2335	10.0	-2	True	AATAAA	-12
PB.6406.1	chr2	+	2813	18	novel_in_catalog	RASGRP3	novel	4738	19	NA	NA	15	-1458	combination_of_known_junctions	FALSE	canonical	1	3963	junction_1	55493.83475934582	NA	6	1	TRUE	NA	NA	NA	C	coding	690	2073	331	2403	45.0	2	True	TATAAA	-20
PB.2057.12	chr11	+	2497	17	incomplete-splice_match	SCYL1	ENST00000420247.6	2583	18	395	0	67	0	5prime_fragment	FALSE	canonical	1	354184	junction_12	158796.54398076292	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	413	2359	5.0	-7258	False	AATAAA	-13
PB.6406.7	chr2	+	4656	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	24	127	24	-1	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	3	NA	TRUE	NA	NA	NA	C	coding	690	2073	717	2789	25.0	1	True	AATAAA	-29
PB.6406.6	chr2	+	3451	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	398	958	3	-832	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	343	2415	65.0	0	True	ATTAAA	-13
PB.6406.5	chr2	+	4412	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	369	26	0	-26	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	3	NA	TRUE	NA	NA	NA	C	coding	690	2073	372	2444	80.0	0	True	ATTAAA	-13
PB.6406.4	chr2	+	2426	12	incomplete-splice_match	RASGRP3	ENST00000403687.7	4807	18	369	24744	0	-2	3prime_fragment	FALSE	canonical	1	119975	junction_7	33225.74719617004	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	372	1661	90.0	0	True	NA	NA
PB.780.46	chr1	-	6226	15	novel_in_catalog	ADAR	novel	6610	15	NA	NA	2	-58	intron_retention	FALSE	canonical	1	223198	junction_8	384412.57413885574	NA	3	NA	TRUE	NA	NA	NA	C	coding	905	2718	991	3708	15.0	-7	True	NA	NA
PB.9635.4	chr5	+	4454	11	novel_not_in_catalog	FAF2	novel	684	3	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	2131	junction_3	119109.35479671611	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	51	1331	25.0	3	True	ATTAAA	-21
PB.438.3	chr1	-	1731	8	novel_not_in_catalog	DAB1	novel	2668	21	NA	NA	8	-654649	any annotated donor/acceptor	FALSE	canonical	1	15038	junction_3	101401.93984297523	NA	0	NA	TRUE	NA	NA	NA	B	coding	481	1446	41	1486	10.0	-13	True	AATAAA	-18
PB.2118.1	chr11	+	4088	1	novel_in_catalog	NDUFS8	novel	791	7	NA	NA	-3	-510	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	133	402	2346	2747	85.0	-11	True	NA	NA
PB.6785.3	chr2	+	1629	4	full-splice_match	ARL6IP6	ENST00000326446.9	2805	4	683	493	-322	-4	multi-exon	FALSE	canonical	1	378192	junction_1	18769.156584377703	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	29	709	35.0	0	True	AATAAA	-11
PB.6785.2	chr2	+	2135	4	full-splice_match	ARL6IP6	ENST00000326446.9	2805	4	670	0	-335	0	multi-exon	FALSE	canonical	1	378192	junction_1	18769.156584377703	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	42	722	10.0	-810	False	TTTAAA	-15
PB.6785.1	chr2	+	2130	1	genic	ARL6IP6	novel	NA	NA	NA	NA	-272	-40101	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	145	438	1005	1442	100.0	-1773	False	NA	NA
PB.780.44	chr1	-	6147	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	19	-54	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	393258.00414806	NA	3	NA	TRUE	NA	NA	NA	C	coding	931	2796	830	3625	20.0	18	True	NA	NA
PB.6785.4	chr2	+	1767	4	full-splice_match	ARL6IP6	ENST00000326446.9	2805	4	702	336	-303	153	multi-exon	FALSE	canonical	1	378192	junction_1	18769.156584377703	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	10	690	30.0	-4	True	ATTAAA	-19
PB.9043.5	chr4	+	2329	13	full-splice_match	ETFDH	ENST00000511912.5	3282	13	153	800	-29	224	multi-exon	FALSE	canonical	1	118647	junction_1	71532.56657266131	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	180	2033	65.0	-38	True	NA	NA
PB.1583.29	chr10	-	3454	14	novel_in_catalog	LOXL4	novel	3653	15	NA	NA	55	-105	no_combination_of_known_junctions	FALSE	canonical	1	675	junction_10	34623.62412005855	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	97	2328	20.0	-2	True	AATAAA	-18
PB.7737.1	chr22	+	1778	4	novel_not_in_catalog	APOL6	novel	10121	3	NA	NA	51	-6776	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	110722.94893411512	NA	1	NA	TRUE	NA	NA	NA	A	coding	343	1032	226	1257	65.0	0	True	NA	NA
PB.780.45	chr1	-	6301	15	full-splice_match	ADAR	ENST00000368471.8	6519	15	-3	221	-3	-58	multi-exon	FALSE	canonical	1	262111	junction_14	299132.5171090224	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	988	3783	15.0	-4	True	NA	NA
PB.3322.5	chr14	-	4337	18	full-splice_match	ACIN1	ENST00000457657.5	4815	18	478	0	17	0	multi-exon	FALSE	canonical	1	248155	junction_15	399871.7822275719	NA	0	NA	TRUE	NA	NA	NA	C	coding	1243	3732	25	3756	20.0	-1	True	AATAAA	-17
PB.4681.4	chr17	-	4067	27	full-splice_match	MYBBP1A	ENST00000381556.6	4104	27	28	9	0	0	multi-exon	FALSE	canonical	1	24240	junction_1	130878.3368402993	NA	0	NA	TRUE	NA	NA	NA	C	coding	1332	3999	35	4033	20.0	25	True	AATAAA	-34
PB.9635.5	chr5	+	1776	11	full-splice_match	FAF2	ENST00000261942.6	4515	11	14	2725	14	-2725	multi-exon	FALSE	canonical	1	151212	junction_3	79676.84526862243	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	40	1377	20.0	-16	True	AATAAA	-22
PB.963.4	chr1	-	3943	6	full-splice_match	TOR1AIP2	ENST00000367612.7	7905	6	-4	3966	0	-2	multi-exon	FALSE	canonical	1	21447	junction_4	75432.50222709042	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	393	1805	40.0	-1	True	AATAAA	-21
PB.7695.1	chr22	-	2318	3	full-splice_match	OSM	ENST00000215781.2	1854	3	-465	1	-465	-1	multi-exon	FALSE	canonical	1	39857	junction_2	2832.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	252	759	507	1265	10.0	8283	False	TTTAAA	-18
PB.1896.9	chr11	+	5935	5	full-splice_match	TRIM44	ENST00000299413.6	12964	5	74	6955	74	4431	multi-exon	FALSE	canonical	1	82692	junction_3	229746.1937775031	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	234	1268	15.0	-1	True	AATAAA	-18
PB.1896.8	chr11	+	2613	5	full-splice_match	TRIM44	ENST00000299413.6	12964	5	72	10279	72	1107	multi-exon	FALSE	canonical	1	82692	junction_3	229746.1937775031	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	236	1270	55.0	-3	True	AATAAA	-28
PB.4681.2	chr17	-	4457	26	full-splice_match	MYBBP1A	ENST00000254718.8	4807	26	273	77	0	-35	multi-exon	FALSE	canonical	1	314898	junction_22	101765.05526724583	NA	20	1	TRUE	NA	NA	NA	C	coding	1328	3987	35	4021	40.0	25	True	AATATA	-16
PB.4681.3	chr17	-	4606	25	novel_in_catalog	MYBBP1A	novel	4104	27	NA	NA	7	0	intron_retention	FALSE	canonical	1	314898	junction_21	103791.57048623102	NA	3	NA	TRUE	NA	NA	NA	C	coding	787	2364	28	2391	20.0	32	True	AATAAA	-34
PB.1896.5	chr11	+	2354	5	full-splice_match	TRIM44	ENST00000299413.6	12964	5	809	9801	809	1585	multi-exon	FALSE	canonical	1	82692	junction_3	229746.1937775031	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	3	533	90.0	213	False	ACTAAA	-39
PB.1896.4	chr11	+	1948	5	full-splice_match	TRIM44	ENST00000299413.6	12964	5	35	10981	35	405	multi-exon	FALSE	canonical	1	82692	junction_3	229746.1937775031	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	273	1307	55.0	-561	False	NA	NA
PB.1896.7	chr11	+	2852	4	novel_in_catalog	TRIM44	novel	12964	5	NA	NA	72	1586	no_combination_of_known_junctions	FALSE	canonical	1	1677	junction_2	206370.1197557437	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	236	1030	90.0	-3	True	ACTAAA	-40
PB.1896.6	chr11	+	3503	5	full-splice_match	TRIM44	ENST00000299413.6	12964	5	61	9400	61	1986	multi-exon	FALSE	canonical	1	82692	junction_3	229746.1937775031	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	247	1281	25.0	-14	True	TATAAA	-26
PB.4681.8	chr17	-	4500	27	novel_not_in_catalog	MYBBP1A	novel	4104	27	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	133941.709071499	NA	10	1	TRUE	NA	NA	NA	C	coding	1328	3987	61	4047	20.0	-1	True	AATAAA	-33
PB.4681.9	chr17	-	3790	26	full-splice_match	MYBBP1A	ENST00000254718.8	4807	26	273	744	0	-123	multi-exon	FALSE	canonical	1	314898	junction_22	101765.05526724583	NA	1	NA	TRUE	NA	NA	NA	C	coding	1252	3756	35	3790	50.0	25	True	NA	NA
PB.1896.3	chr11	+	2982	6	novel_not_in_catalog	TRIM44	novel	12964	5	NA	NA	92	1585	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	243311.56854255818	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	523	1161	90.0	17	True	ACTAAA	-39
PB.1896.2	chr11	+	1837	2	novel_not_in_catalog	TRIM44	novel	12964	5	NA	NA	-58	1585	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-28	True	ACTAAA	-39
PB.539.1	chr1	+	3453	1	novel_in_catalog	RPL5	novel	1085	8	NA	NA	-2	197	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-2	True	NA	NA
PB.9407.3	chr5	+	4858	4	intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	599	junction_3	1078.6123801749482	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-1	True	CATAAA	-36
PB.9407.2	chr5	+	1817	4	intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1350	junction_3	798.9819911751591	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-2	True	NA	NA
PB.9407.1	chr5	+	4810	4	intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1350	junction_3	798.9819911751591	NA	5	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-2	True	ATTAAA	-19
PB.561.1	chr1	+	2554	7	full-splice_match	SLC35A3	ENST00000640178.1	2446	7	-44	-64	1	-8	multi-exon	TRUE	canonical	1	15323	junction_2	80620.21530350395	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	488	1024	95.0	-593	False	NA	NA
PB.6764.5	chr2	+	3141	9	novel_in_catalog	KYNU	novel	15316	14	NA	NA	-1	-523	combination_of_known_junctions	FALSE	canonical	1	8772	junction_8	150176.43807197045	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	94	831	80.0	-1	True	ATTAAA	-26
PB.6565.9	chr2	-	3062	12	novel_in_catalog	RTKN	novel	2646	13	NA	NA	130	-1	intron_retention	FALSE	canonical	1	34573	junction_11	100229.45682699628	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	457	1785	15.0	-1	True	ATTAAA	-14
PB.6565.8	chr2	-	2175	12	full-splice_match	RTKN	ENST00000272430.9	2142	12	-20	-13	-20	13	multi-exon	FALSE	canonical	1	133190	junction_10	67834.55059905098	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	104	1795	10.0	-11	True	ATTAAA	-35
PB.6565.7	chr2	-	2122	12	full-splice_match	RTKN	ENST00000233330.6	2220	12	96	2	48	-2	multi-exon	FALSE	canonical	1	63795	junction_11	84949.89043309615	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	223	1764	10.0	17	True	ATTAAA	-13
PB.3588.6	chr14	-	5383	6	full-splice_match	TMED8	ENST00000216468.7	7784	6	15	2386	15	-2386	multi-exon	FALSE	canonical	1	66834	junction_5	25893.11532898272	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	42	1019	65.0	-1	True	NA	NA
PB.9586.1	chr5	-	5420	28	full-splice_match	GEMIN5	ENST00000285873.7	5397	28	-7	-16	-7	16	multi-exon	FALSE	canonical	1	120997	junction_26	43394.18417911143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1508	4527	84	4610	30.0	-18	True	NA	NA
PB.6565.4	chr2	-	2795	13	full-splice_match	RTKN	ENST00000305557.9	2646	13	-194	45	-146	2	multi-exon	FALSE	canonical	1	34573	junction_12	99682.2178289867	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	781	2433	15.0	1644	False	ATTAAA	-17
PB.9586.7	chr5	-	2300	16	incomplete-splice_match	GEMIN5	ENST00000285873.7	5397	28	-1	20347	-1	-16329	3prime_fragment	FALSE	canonical	1	120997	junction_14	48166.871401364195	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2223	78	2300	65.0	-12	True	NA	NA
PB.3588.2	chr14	-	7759	6	full-splice_match	TMED8	ENST00000216468.7	7784	6	23	2	23	-2	multi-exon	FALSE	canonical	1	66834	junction_5	25893.11532898272	NA	6	NA	TRUE	NA	NA	NA	C	coding	325	978	34	1011	35.0	7	True	AATAAA	-22
PB.9586.5	chr5	-	4328	26	novel_not_in_catalog	GEMIN5	novel	5397	28	NA	NA	6	192	any annotated donor/acceptor	FALSE	canonical	1	20364	junction_22	53411.00787911046	NA	0	NA	TRUE	NA	NA	NA	C	coding	1419	4257	71	4327	35.0	-5	True	NA	NA
PB.9058.6	chr4	-	5887	37	novel_in_catalog	DDX60	novel	6071	38	NA	NA	23	-2	no_combination_of_known_junctions	FALSE	canonical	1	747	junction_28	37900.96031425926	NA	4	NA	TRUE	NA	NA	NA	C	coding	1660	4983	267	5249	15.0	17	True	AATAAA	-18
PB.9058.5	chr4	-	5967	38	novel_not_in_catalog	DDX60	novel	6071	38	NA	NA	23	-2	any annotated donor/acceptor	FALSE	canonical	1	311	junction_36	37719.113518763195	NA	0	NA	TRUE	NA	NA	NA	C	coding	1700	5103	227	5329	15.0	17	True	AATAAA	-18
PB.10323.8	chr6	-	2367	2	full-splice_match	PDE10A	ENST00000455853.1	1822	2	-9	-536	0	536	multi-exon	FALSE	canonical	1	17314	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	3	True	NA	NA
PB.9058.1	chr4	-	6097	39	novel_not_in_catalog	DDX60	novel	6071	38	NA	NA	50	0	any annotated donor/acceptor	FALSE	canonical	1	1012	junction_38	40371.76230576428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1712	5139	319	5457	20.0	-3	True	AATAAA	-20
PB.11627.5	chr9	-	4366	26	full-splice_match	AGTPBP1	ENST00000376083.7	4208	26	-160	2	51	-1	multi-exon	FALSE	canonical	1	50446	junction_16	69536.90892123405	NA	0	NA	TRUE	NA	NA	NA	C	coding	1186	3561	238	3798	15.0	-53	True	AATAAA	-18
PB.9635.3	chr5	+	4334	10	novel_in_catalog	FAF2	novel	684	3	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	3759	junction_7	137040.78718810616	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	52	741	25.0	2	True	ATTAAA	-21
PB.7644.4	chr22	-	2108	6	full-splice_match	PRAME	ENST00000398741.5	2202	6	56	38	-4	27	multi-exon	FALSE	canonical	1	113431	junction_5	201929.22524488624	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	252	1781	60.0	-8	True	NA	NA
PB.7644.5	chr22	-	2265	6	novel_in_catalog	PRAME	novel	2196	6	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	1	2011	junction_4	245100.18036582513	NA	1	1	TRUE	NA	NA	NA	C	coding	509	1530	371	1900	20.0	-9	True	AATAAA	-18
PB.3501.9	chr14	+	2051	1	novel_in_catalog	CHURC1-FNTB	novel	1847	13	NA	NA	63186	-26403	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	167	504	3	506	100.0	327	False	NA	NA
PB.7644.1	chr22	-	2713	5	novel_in_catalog	PRAME	novel	2196	6	NA	NA	43	0	intron_retention	FALSE	canonical	1	113431	junction_4	202779.05663245896	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	819	2348	20.0	1	True	AATAAA	-18
PB.7644.2	chr22	-	2762	5	full-splice_match	PRAME	ENST00000543184.5	2758	5	-3	-1	-3	0	multi-exon	FALSE	canonical	1	105604	junction_4	205688.43770418284	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	867	2396	15.0	-30	True	AATAAA	-19
PB.7644.8	chr22	-	2149	6	full-splice_match	PRAME	ENST00000398743.6	2196	6	46	1	-5	0	multi-exon	FALSE	canonical	1	105604	junction_5	203930.81109003612	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	255	1784	20.0	-32	True	AATAAA	-18
PB.7727.1	chr22	+	3857	4	antisense	novelGene_SYN3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	341.79948637891323	NA	3	1	FALSE	NA	NA	NA	A	coding	102	309	2406	2714	75.0	NA	False	NA	NA
PB.4663.8	chr17	-	3557	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	-7	-1010	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	54667.75819813723	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	141	1829	100.0	-11	True	NA	NA
PB.4663.9	chr17	-	3375	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	-2	-1010	any annotated donor/acceptor	FALSE	canonical	1	994	junction_1	54386.91441523411	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	136	1824	100.0	-6	True	NA	NA
PB.561.3	chr1	+	2792	9	full-splice_match	SLC35A3	ENST00000427993.7	2062	9	17	-747	-9	-8	multi-exon	TRUE	canonical	1	26985	junction_1	73254.85669810143	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	285	1262	95.0	-17	True	NA	NA
PB.4663.4	chr17	-	2752	11	novel_in_catalog	METTL16	novel	2644	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3199	junction_1	53764.583139460876	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	132	1820	70.0	-2	True	NA	NA
PB.4663.5	chr17	-	1865	7	novel_not_in_catalog	METTL16	novel	2644	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62801.169141850645	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	131	805	70.0	-1	True	NA	NA
PB.4663.6	chr17	-	4706	10	full-splice_match	METTL16	ENST00000263092.10	5711	10	-5	1010	0	-1010	multi-exon	FALSE	canonical	1	143183	junction_4	19322.664070087027	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	134	1822	100.0	-4	True	NA	NA
PB.4663.7	chr17	-	3667	11	novel_not_in_catalog	METTL16	novel	759	2	NA	NA	0	-1010	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	54667.75819813723	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	134	1822	100.0	-4	True	NA	NA
PB.4663.1	chr17	-	4402	11	novel_not_in_catalog	METTL16	novel	2644	3	NA	NA	-19	0	any annotated donor/acceptor	FALSE	canonical	1	994	junction_1	54386.91441523411	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	153	1841	70.0	-23	False	NA	NA
PB.4663.2	chr17	-	4277	11	novel_not_in_catalog	METTL16	novel	2644	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1342	junction_1	54288.634588189816	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	131	1819	70.0	-1	True	NA	NA
PB.4663.3	chr17	-	3926	11	novel_not_in_catalog	METTL16	novel	2644	3	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	54667.75819813723	NA	3	1	TRUE	NA	NA	NA	C	coding	562	1689	136	1824	70.0	-6	True	NA	NA
PB.8205.1	chr3	+	3226	1	intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	86	261	117	377	95.0	NA	False	NA	NA
PB.11590.1	chr9	+	2641	1	novel_in_catalog	CBWD3	novel	2021	22	NA	NA	0	-4000	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.11590.2	chr9	+	2899	3	full-splice_match	CBWD3	ENST00000478048.5	1736	3	-1	-1162	1	1162	multi-exon	FALSE	canonical	1	15647	junction_1	393.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	78	419	40.0	NA	False	NA	NA
PB.11590.3	chr9	+	1746	16	novel_in_catalog	CBWD3	novel	2021	22	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	10074.7726357582	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	60	602	30.0	NA	False	ATTAAA	-12
PB.11590.4	chr9	+	1820	16	novel_in_catalog	CBWD3	novel	2021	22	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	513	junction_10	4751.6885120508	NA	4	NA	TRUE	NA	NA	NA	C	coding	160	483	59	541	20.0	NA	False	NA	NA
PB.11590.5	chr9	+	4567	1	novel_in_catalog	CBWD3	novel	2021	22	NA	NA	5629	11706	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	NA	False	ATTAAA	-17
PB.7581.18	chr21	+	2463	8	novel_not_in_catalog	PRMT2	novel	2688	12	NA	NA	1	656	intron_retention	FALSE	canonical	0	0	junction_1	383122.1308523123	NA	2	1	TRUE	NA	NA	NA	C	coding	277	834	468	1301	60.0	1	True	TTTAAA	-19
PB.7581.19	chr21	+	2234	7	novel_not_in_catalog	PRMT2	novel	2688	12	NA	NA	1	1324	intron_retention	FALSE	canonical	1	13711	junction_1	472360.2875044994	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	149	1012	35.0	1	True	NA	NA
PB.438.1	chr1	-	2660	9	novel_in_catalog	DAB1	novel	2668	21	NA	NA	14	-653882	no_combination_of_known_junctions	FALSE	canonical	1	41317	junction_8	70941.76424892462	NA	0	NA	TRUE	NA	NA	NA	B	coding	524	1575	74	1648	45.0	-7	True	AATAAA	-18
PB.3501.1	chr14	+	3161	4	full-splice_match	CHURC1	ENST00000552002.6	2566	4	11	-606	-8	-377	multi-exon	FALSE	canonical	1	1001868	junction_2	217441.6493841253	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	62	400	30.0	-23	True	NA	NA
PB.11625.24	chr9	-	5137	14	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	5	18	intron_retention	FALSE	canonical	0	0	junction_3	797102.1702921909	NA	4	1	TRUE	NA	NA	NA	B	coding	221	666	3301	3966	20.0	-13	True	AATAAA	-19
PB.438.5	chr1	-	1779	9	novel_in_catalog	DAB1	novel	2668	21	NA	NA	-56	-654807	no_combination_of_known_junctions	FALSE	canonical	1	11922	junction_8	79745.74598362207	NA	0	NA	TRUE	NA	NA	NA	B	coding	524	1575	118	1692	65.0	-77	False	TTTAAA	-18
PB.438.4	chr1	-	1724	8	novel_in_catalog	DAB1	novel	2668	21	NA	NA	33	-654649	no_combination_of_known_junctions	FALSE	canonical	1	16919	junction_1	90605.45587640641	NA	1	1	TRUE	NA	NA	NA	B	coding	474	1425	55	1479	10.0	12	True	AATAAA	-18
PB.7581.10	chr21	+	2245	11	novel_not_in_catalog	PRMT2	novel	2688	12	NA	NA	-4	0	intron_retention	FALSE	canonical	1	13711	junction_1	345193.99020197324	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	154	1455	30.0	-4	True	NA	NA
PB.7581.11	chr21	+	2378	8	full-splice_match	PRMT2	ENST00000458387.6	1874	8	76	-580	-3	573	multi-exon	FALSE	canonical	1	14324	junction_6	374305.83455963887	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	150	1055	15.0	-3	True	NA	NA
PB.7581.12	chr21	+	2475	12	full-splice_match	PRMT2	ENST00000355680.7	2688	12	505	-292	-2	119	multi-exon	FALSE	canonical	1	290231	junction_10	299188.60050744464	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	258	1559	75.0	-2	True	NA	NA
PB.7581.13	chr21	+	2065	11	full-splice_match	PRMT2	ENST00000397638.6	2131	11	57	9	-2	-9	multi-exon	FALSE	canonical	1	290231	junction_9	282634.98512549716	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	149	1450	20.0	-2	True	NA	NA
PB.7581.14	chr21	+	2901	10	novel_in_catalog	PRMT2	novel	2688	12	NA	NA	0	-8	intron_retention	FALSE	canonical	1	290231	junction_8	283793.3696330031	NA	2	NA	TRUE	NA	NA	NA	C	coding	324	975	147	1121	20.0	0	True	NA	NA
PB.7581.15	chr21	+	2203	7	full-splice_match	PRMT2	ENST00000291705.11	1011	7	32	-1224	0	573	multi-exon	FALSE	canonical	1	23211	junction_6	385072.2033769194	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	147	833	15.0	0	True	NA	NA
PB.7581.16	chr21	+	1687	8	incomplete-splice_match	PRMT2	ENST00000355680.7	2688	12	507	5429	0	92	3prime_fragment	FALSE	canonical	1	300170	junction_1	313202.39544239943	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	256	1089	70.0	0	True	NA	NA
PB.7581.17	chr21	+	3432	8	incomplete-splice_match	PRMT2	ENST00000355680.7	2688	12	508	3683	1	-2	intron_retention	FALSE	canonical	1	300170	junction_1	313202.39544239943	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	255	1088	25.0	1	True	AATAAA	-14
PB.4673.2	chr17	+	3699	2	antisense	novelGene_ITGAE_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	A	coding	798	2397	24	2420	10.0	-4	True	GATAAA	-20
PB.4673.1	chr17	+	2356	1	full-splice_match	HASPIN	ENST00000325418.5	2797	1	433	8	433	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	566	1701	297	1997	50.0	419	False	AATAAA	-14
PB.11477.7	chr9	-	3153	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	-6	3625	-6	-213	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	294	2000	30.0	1120	False	ATTAAA	-15
PB.539.5	chr1	+	3589	1	novel_in_catalog	RPL5	novel	1085	8	NA	NA	8	367	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.7125.1	chr20	+	946	3	full-splice_match	RBCK1	ENST00000475269.5	1200	3	252	2	-13	-2	multi-exon	FALSE	canonical	1	638993	junction_1	25670.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	429	746	10.0	25	True	NA	NA
PB.7125.2	chr20	+	2183	12	full-splice_match	RBCK1	ENST00000356286.9	2774	12	589	2	299	0	multi-exon	FALSE	canonical	1	253633	junction_6	156514.3653580127	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	117	1649	25.0	154	False	ATTAAA	-14
PB.7125.3	chr20	+	2651	13	novel_in_catalog	RBCK1	novel	593	5	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	8338	junction_2	239389.01068466643	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	462	2117	25.0	-8	True	ATTAAA	-14
PB.7125.4	chr20	+	4306	3	full-splice_match	RBCK1	ENST00000475269.5	1200	3	221	-3327	-6	3327	multi-exon	FALSE	canonical	1	638993	junction_1	25670.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	105	318	460	777	85.0	-6	True	NA	NA
PB.7125.5	chr20	+	2465	1	novel_in_catalog	RBCK1	novel	593	5	NA	NA	-6	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	39	120	288	407	15.0	-6	True	NA	NA
PB.7125.6	chr20	+	2348	11	full-splice_match	RBCK1	ENST00000353660.7	2511	11	165	-2	-7	2	multi-exon	FALSE	canonical	1	25844	junction_1	213684.92275216797	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	404	1810	20.0	31	True	ATTAAA	-18
PB.5664.1	chr19	+	4530	36	novel_in_catalog	AC008878.2	novel	942	10	NA	NA	564	21708	no_combination_of_known_junctions	TRUE	canonical	1	35162	junction_2	171492.8361058257	NA	0	NA	TRUE	NA	NA	NA	B	coding	1326	3981	345	4325	5.0	-5	True	AATAAA	-19
PB.9743.4	chr6	+	1805	5	novel_not_in_catalog	EDN1	novel	2033	5	NA	NA	1620	-1	any annotated donor/acceptor	FALSE	canonical	1	177	junction_1	139085.30463801703	NA	4	1	TRUE	NA	NA	NA	C	coding	154	465	215	679	30.0	-4478	False	AATAAA	-19
PB.11477.2	chr9	-	4397	11	full-splice_match	MLLT3	ENST00000630269.2	2040	11	-64	-2293	-64	1170	multi-exon	FALSE	canonical	1	10010	junction_10	85233.95516629508	NA	3	NA	TRUE	NA	NA	NA	C	coding	565	1698	163	1860	40.0	0	True	AATAAA	-17
PB.483.21	chr1	-	4090	14	novel_in_catalog	AC118549.1	novel	4500	11	NA	NA	0	-166	combination_of_known_junctions	FALSE	canonical	1	21350	junction_12	115601.35666199889	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	414	3122	30.0	-1	True	ATTAAA	-17
PB.9599.3	chr5	-	3062	4	full-splice_match	PWWP2A	ENST00000456329.7	3991	4	-58	987	-58	975	multi-exon	FALSE	canonical	1	41701	junction_2	21750.332309083362	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	94	1776	60.0	-32	False	TTTAAA	-34
PB.10919.1	chr7	+	2267	3	full-splice_match	ATP6V0E2	ENST00000464662.5	513	3	-30	-1724	-13	0	multi-exon	FALSE	canonical	1	502225	junction_1	16315.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	14	349	35.0	-13	True	AATAAA	-12
PB.154.1	chr1	+	6033	18	full-splice_match	ZBTB40	ENST00000375647.4	8685	18	-15	2667	1	-2667	multi-exon	FALSE	canonical	1	80492	junction_4	31683.778637675867	NA	0	NA	TRUE	NA	NA	NA	C	coding	1239	3720	223	3942	25.0	1	True	AATAAA	-18
PB.539.4	chr1	+	2370	6	novel_in_catalog	RPL5	novel	1085	8	NA	NA	-8	-3	intron_retention	FALSE	canonical	1	94364	junction_4	2497323.4282670715	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	1574	2317	25.0	9	True	AATAAA	-12
PB.9743.1	chr6	+	1380	5	full-splice_match	EDN1	ENST00000379375.5	2033	5	-3	656	-3	-656	multi-exon	FALSE	canonical	1	113181	junction_1	92256.76666917175	NA	3	1	TRUE	NA	NA	NA	C	coding	212	639	271	909	85.0	-1	True	AAAACA	-25
PB.9743.2	chr6	+	2036	5	full-splice_match	EDN1	ENST00000379375.5	2033	5	-4	1	-4	-1	multi-exon	FALSE	canonical	1	113181	junction_1	92256.76666917175	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	272	910	30.0	-2	True	AATAAA	-19
PB.6594.22	chr2	+	3003	8	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	1	-3	intron_retention	FALSE	canonical	1	715016	junction_7	546833.7252050878	NA	5	NA	TRUE	NA	NA	NA	C	coding	267	804	120	923	20.0	1	True	AATAAA	-17
PB.6594.23	chr2	+	2607	8	incomplete-splice_match	MAT2A	ENST00000306434.7	2819	9	1914	2	-403	-2	5prime_fragment	FALSE	canonical	1	715016	junction_7	529211.8045880947	NA	2	NA	TRUE	NA	NA	NA	C	coding	332	999	103	1101	20.0	-2064	False	AATAAA	-18
PB.6594.20	chr2	+	1703	9	full-splice_match	MAT2A	ENST00000306434.7	2819	9	3	1113	0	559	multi-exon	FALSE	canonical	1	715016	junction_8	552725.8510904728	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	121	1308	15.0	0	True	NA	NA
PB.6594.21	chr2	+	3530	7	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	1	-3	intron_retention	FALSE	canonical	1	1071348	junction_3	493265.45986911433	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	614	1291	20.0	1	True	AATAAA	-17
PB.9861.1	chr6	+	1756	3	novel_in_catalog	HCG22	novel	1675	4	NA	NA	-4	0	intron_retention	FALSE	canonical	1	987	junction_1	2768.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	111	336	832	1167	70.0	-791	False	NA	NA
PB.6848.5	chr2	+	2468	8	full-splice_match	SCRN3	ENST00000272732.10	3037	8	-5	574	-1	142	multi-exon	FALSE	canonical	1	43957	junction_1	59988.697972949834	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	88	1362	35.0	1	True	AATAAA	-18
PB.6848.4	chr2	+	4014	8	novel_in_catalog	SCRN3	novel	1141	7	NA	NA	-2	495	combination_of_known_junctions	FALSE	canonical	1	9852	junction_1	69740.9505269907	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	565	1839	15.0	0	True	NA	NA
PB.6848.7	chr2	+	2061	8	full-splice_match	SCRN3	ENST00000272732.10	3037	8	5	971	-2	187	multi-exon	FALSE	canonical	1	43957	junction_1	59988.697972949834	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	78	1352	15.0	11	True	GATAAA	-18
PB.6848.6	chr2	+	2149	8	novel_in_catalog	SCRN3	novel	1141	7	NA	NA	3	-103	combination_of_known_junctions	FALSE	canonical	1	9852	junction_1	69740.9505269907	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	556	1830	40.0	9	True	TATAAA	-13
PB.1816.1	chr11	+	3737	15	full-splice_match	AMPD3	ENST00000396553.6	3680	15	-56	-1	-56	1	multi-exon	FALSE	canonical	1	25011	junction_1	38673.351616389526	NA	2	NA	TRUE	NA	NA	NA	C	coding	767	2304	191	2494	20.0	0	True	NA	NA
PB.1816.3	chr11	+	3669	15	novel_not_in_catalog	AMPD3	novel	576	4	NA	NA	120	-2	any annotated donor/acceptor	FALSE	canonical	1	1400	junction_13	54374.42893779414	NA	2	1	TRUE	NA	NA	NA	C	coding	535	1608	82	1689	30.0	-1	True	NA	NA
PB.1816.2	chr11	+	3674	15	full-splice_match	AMPD3	ENST00000528723.5	2753	15	92	-1013	92	-2	multi-exon	FALSE	canonical	1	32733	junction_1	37385.6007575109	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	110	2434	30.0	0	True	NA	NA
PB.7193.17	chr20	+	3366	21	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	-7	-2	no_combination_of_known_junctions	FALSE	canonical	1	1799	junction_1	276410.0610355745	NA	29	1	TRUE	NA	NA	NA	C	coding	767	2304	390	2693	15.0	-14	True	AATATA	-17
PB.7193.16	chr20	+	2974	20	full-splice_match	SEC23B	ENST00000377465.6	3351	20	-17	394	-10	-34	multi-exon	FALSE	canonical	1	12304	junction_1	231253.73201408712	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	390	2693	20.0	-17	True	AATAAA	-20
PB.7193.15	chr20	+	3017	21	novel_not_in_catalog	SEC23B	novel	3484	20	NA	NA	21	-1	any annotated donor/acceptor	FALSE	canonical	1	1492	junction_2	276442.5651858764	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	333	2636	10.0	-29	True	AATACA	-15
PB.5020.1	chr17	-	3841	1	full-splice_match	AC109326.1	ENST00000624705.1	1321	1	0	-2520	0	2520	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	121	366	3224	3589	90.0	-1	True	NA	NA
PB.7193.13	chr20	+	2648	19	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	15	-33	combination_of_known_junctions	FALSE	canonical	1	8101	junction_16	262565.97949992714	NA	1	1	TRUE	NA	NA	NA	C	coding	738	2217	83	2299	55.0	-35	True	AATAAA	-23
PB.7193.12	chr20	+	2511	20	full-splice_match	SEC23B	ENST00000650089.1	3026	20	-37	552	13	30	multi-exon	FALSE	canonical	1	237497	junction_1	197670.8351379318	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	85	2388	35.0	-37	True	NA	NA
PB.7193.11	chr20	+	2607	19	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	9	-31	combination_of_known_junctions	FALSE	canonical	1	8101	junction_16	256386.23516597637	NA	4	1	TRUE	NA	NA	NA	C	coding	738	2217	107	2323	25.0	-41	True	AATAAA	-23
PB.7193.10	chr20	+	2893	21	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	8	-40	no_combination_of_known_junctions	FALSE	canonical	1	640	junction_1	275392.05767927936	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	315	2618	15.0	-42	True	AATAAA	-14
PB.1114.6	chr1	+	2251	9	novel_in_catalog	TATDN3	novel	1381	10	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	6293	junction_4	79870.12726676586	NA	5	1	TRUE	NA	NA	NA	C	coding	252	759	24	782	35.0	-15	True	AATAAA	-18
PB.11534.1	chr9	+	1968	5	full-splice_match	GLIPR2	ENST00000377960.8	1890	5	-87	9	-84	2	multi-exon	TRUE	canonical	1	376111	junction_1	55139.48766990858	NA	0	NA	TRUE	NA	NA	NA	A	coding	154	465	122	586	35.0	-5268	False	AATAAA	-17
PB.1114.4	chr1	+	2026	10	full-splice_match	TATDN3	ENST00000366973.8	2321	10	-1	296	-1	-296	multi-exon	FALSE	canonical	1	72378	junction_8	54117.95964327015	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	40	861	70.0	-31	True	NA	NA
PB.1114.5	chr1	+	2520	10	full-splice_match	TATDN3	ENST00000366974.8	2389	10	67	-198	-11	198	multi-exon	FALSE	canonical	1	87743	junction_8	50608.05600999816	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	28	852	15.0	-19	True	NA	NA
PB.1114.2	chr1	+	2394	10	full-splice_match	TATDN3	ENST00000532324.5	1381	10	47	-1060	5	31	multi-exon	FALSE	canonical	1	17550	junction_8	67974.34392765451	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	48	893	45.0	-39	True	AATAAA	-8
PB.1114.3	chr1	+	2332	10	full-splice_match	TATDN3	ENST00000366974.8	2389	10	55	2	-1	-2	multi-exon	FALSE	canonical	1	87743	junction_8	50608.05600999816	NA	1	1	TRUE	NA	NA	NA	C	coding	274	825	40	864	30.0	-31	True	AATAAA	-17
PB.6322.1	chr2	-	3861	1	intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.9855.1	chr6	+	1694	3	novel_not_in_catalog	TUBB	novel	2670	4	NA	NA	149	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1152962.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	301	675	40.0	-2	True	AATAAA	-10
PB.11066.2	chr8	-	3523	2	incomplete-splice_match	KIF13B	ENST00000523130.1	1267	5	36537	-3214	36537	-1	5prime_fragment	TRUE	canonical	1	115423	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	98	297	3	299	20.0	NA	False	AATAAA	-21
PB.5815.3	chr19	+	3091	8	novel_in_catalog	AC010463.1	novel	1207	10	NA	NA	14479	4679	intron_retention	FALSE	canonical	1	17950	junction_1	35841.29607373173	NA	4	3	TRUE	NA	NA	NA	B	coding	400	1203	25	1227	20.0	-4	True	NA	NA
PB.7739.5	chr22	-	3040	2	novel_not_in_catalog	APOL3	novel	2117	3	NA	NA	-3	-406	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	23	True	NA	NA
PB.1551.7	chr10	+	3122	22	full-splice_match	HELLS	ENST00000348459.9	3099	22	0	-23	0	23	multi-exon	FALSE	canonical	1	120448	junction_1	39804.41339686443	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	106	2622	40.0	-3	True	AATAAA	-41
PB.7739.1	chr22	-	2311	4	full-splice_match	APOL3	ENST00000432700.5	2443	4	131	1	-15	-1	multi-exon	FALSE	canonical	1	33972	junction_3	90555.45863662162	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	447	1442	25.0	11	True	NA	NA
PB.6318.8	chr2	+	4542	21	novel_not_in_catalog	LPIN1	novel	3077	22	NA	NA	14	0	any annotated donor/acceptor	FALSE	canonical	1	2773	junction_2	81772.14196350735	NA	2	NA	TRUE	NA	NA	NA	C	coding	890	2673	148	2820	100.0	-4062	False	NA	NA
PB.7739.3	chr22	-	2073	4	full-splice_match	APOL3	ENST00000397289.6	2214	4	140	1	-6	-1	multi-exon	FALSE	canonical	1	92291	junction_3	66376.08600659997	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	209	1204	25.0	20	True	NA	NA
PB.7739.2	chr22	-	2207	5	full-splice_match	APOL3	ENST00000422426.5	2327	5	119	1	-27	-1	multi-exon	FALSE	canonical	1	30876	junction_3	94107.340929122	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	343	1338	25.0	-1	True	NA	NA
PB.6318.5	chr2	+	5460	21	novel_in_catalog	LPIN1	novel	3077	22	NA	NA	15	-13	combination_of_known_junctions	FALSE	canonical	1	59310	junction_5	70207.6788352955	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	79	2859	45.0	-29	True	AATAAA	-12
PB.6318.4	chr2	+	4597	20	novel_not_in_catalog	LPIN1	novel	3077	22	NA	NA	15	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	71711.61162234248	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	79	1392	100.0	-29	True	NA	NA
PB.6318.7	chr2	+	5457	20	novel_not_in_catalog	LPIN1	novel	3077	22	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	71711.61162234248	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	48	1361	35.0	2	True	AATAAA	-25
PB.6318.6	chr2	+	3913	20	full-splice_match	LPIN1	ENST00000256720.6	5384	20	54	1417	4	-521	multi-exon	FALSE	canonical	1	121656	junction_1	46449.13764753277	NA	3	NA	TRUE	NA	NA	NA	C	coding	890	2673	40	2712	50.0	10	True	NA	NA
PB.6318.1	chr2	+	5370	20	full-splice_match	LPIN1	ENST00000256720.6	5384	20	9	5	9	-1	multi-exon	FALSE	canonical	1	121656	junction_1	46449.13764753277	NA	1	NA	TRUE	NA	NA	NA	C	coding	890	2673	85	2757	35.0	-35	True	AATAAA	-24
PB.6318.3	chr2	+	4464	20	full-splice_match	LPIN1	ENST00000256720.6	5384	20	25	895	-21	1	multi-exon	FALSE	canonical	1	121656	junction_1	46449.13764753277	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	69	2741	100.0	-19	True	NA	NA
PB.6318.2	chr2	+	4582	21	novel_in_catalog	LPIN1	novel	3077	22	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	59310	junction_5	70207.6788352955	NA	2	NA	TRUE	NA	NA	NA	C	coding	926	2781	80	2860	100.0	-30	True	NA	NA
PB.11152.18	chr8	-	4509	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-7	-674	combination_of_known_junctions	FALSE	canonical	1	345915	junction_11	791679.926981414	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	233	2380	20.0	3	True	AATAAA	-17
PB.6124.2	chr19	-	3096	20	full-splice_match	PLEKHA4	ENST00000263265.10	3088	20	-5	-3	-5	3	multi-exon	FALSE	canonical	1	72722	junction_12	21158.493390457097	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	562	2901	15.0	7733	False	ATTAAA	-18
PB.6124.3	chr19	-	3014	19	novel_in_catalog	PLEKHA4	novel	2614	17	NA	NA	18	3	combination_of_known_junctions	FALSE	canonical	1	45622	junction_2	25267.57662346826	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	539	2527	15.0	-1	True	ATTAAA	-18
PB.6812.18	chr2	-	2560	11	incomplete-splice_match	IFIH1	ENST00000649979.1	3544	16	2	9695	2	-9526	3prime_fragment	FALSE	canonical	1	173522	junction_3	51191.712052343006	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2217	344	2560	50.0	32	True	AAAACA	-37
PB.6124.1	chr19	-	3042	19	novel_in_catalog	PLEKHA4	novel	2614	17	NA	NA	-26	3	combination_of_known_junctions	FALSE	canonical	1	20452	junction_11	27961.697343568638	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	583	2847	15.0	7712	False	ATTAAA	-18
PB.6124.6	chr19	-	3141	19	novel_in_catalog	PLEKHA4	novel	2614	17	NA	NA	15	-2	intron_retention	FALSE	canonical	1	72722	junction_11	19669.519663823914	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	542	2317	20.0	-4	True	ATTAAA	-13
PB.6124.7	chr19	-	2150	15	novel_in_catalog	PLEKHA4	novel	2614	17	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	5053	junction_14	35659.23439350055	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	290	1960	20.0	1	True	ATTAAA	-13
PB.6124.4	chr19	-	2939	18	novel_in_catalog	PLEKHA4	novel	2614	17	NA	NA	18	3	combination_of_known_junctions	FALSE	canonical	1	20452	junction_10	31604.29813570488	NA	2	NA	TRUE	NA	NA	NA	C	coding	637	1914	539	2452	15.0	-1	True	ATTAAA	-18
PB.6124.5	chr19	-	3045	20	novel_not_in_catalog	PLEKHA4	novel	2614	17	NA	NA	31	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	38564.13679498586	NA	4	NA	TRUE	NA	NA	NA	C	coding	610	1833	526	2358	20.0	12	True	ATTAAA	-14
PB.6812.13	chr2	-	3713	17	novel_not_in_catalog	IFIH1	novel	3544	16	NA	NA	9	-2	any annotated donor/acceptor	FALSE	canonical	1	1141	junction_15	97619.47130069566	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	1234	3594	35.0	7	True	AATAAA	-18
PB.6124.8	chr19	-	2093	14	novel_in_catalog	PLEKHA4	novel	2614	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	5053	junction_13	39800.76478302407	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	292	1611	20.0	-1	True	ATTAAA	-13
PB.9043.3	chr4	+	2050	12	full-splice_match	ETFDH	ENST00000307738.5	1903	12	-63	-84	-31	84	multi-exon	FALSE	canonical	1	3023	junction_1	94395.69283133335	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	182	1894	40.0	-40	True	AATAAA	-31
PB.8560.6	chr3	+	3194	18	novel_not_in_catalog	ABCF3	novel	2624	21	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_8	144453.09033000737	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	1427	2887	5.0	-13	True	ATTAAA	-15
PB.6812.15	chr2	-	3269	16	full-splice_match	IFIH1	ENST00000649979.1	3544	16	60	215	60	-46	multi-exon	FALSE	canonical	1	173522	junction_8	51008.916272702314	NA	1	1	TRUE	NA	NA	NA	C	coding	994	2982	286	3267	75.0	2434	False	NA	NA
PB.8669.9	chr4	-	2042	11	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	0	1	intron_retention	FALSE	canonical	1	131872	junction_7	258422.36482241625	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	50	490	25.0	28	True	AATAAA	-20
PB.5922.1	chr19	+	1382	9	full-splice_match	FXYD3	ENST00000604404.5	1322	9	-61	1	-61	0	multi-exon	FALSE	canonical	1	35685	junction_1	743228.0285783765	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5	True	AATAAA	-19
PB.5922.3	chr19	+	1638	1	novel_in_catalog	AC020907.6	novel	1781	9	NA	NA	9610	-6540	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	12	True	NA	NA
PB.5922.2	chr19	+	1706	10	novel_in_catalog	AC020907.6	novel	1781	9	NA	NA	9068	26	no_combination_of_known_junctions	FALSE	canonical	1	35685	junction_1	909299.1220919605	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-2912	False	AATAAA	-19
PB.5922.5	chr19	+	3003	4	full-splice_match	FXYD3	ENST00000603449.5	573	4	-437	-1993	2	1	multi-exon	FALSE	canonical	1	1008575	junction_3	288108.238495342	NA	2	NA	TRUE	NA	NA	NA	C	coding	152	459	1845	2303	20.0	-42	True	NA	NA
PB.5922.4	chr19	+	2489	7	novel_in_catalog	AC020907.6	novel	1781	9	NA	NA	9356	-642	intron_retention	FALSE	canonical	1	1008575	junction_3	505821.35990947107	NA	1	NA	TRUE	NA	NA	NA	B	coding	143	432	1860	2291	25.0	-2624	False	NA	NA
PB.5922.6	chr19	+	2562	8	novel_in_catalog	AC020907.6	novel	1781	9	NA	NA	9371	-638	intron_retention	FALSE	canonical	1	71774	junction_1	914082.3366761144	NA	1	NA	TRUE	NA	NA	NA	B	coding	142	429	335	763	20.0	-42	True	NA	NA
PB.11099.1	chr8	+	3258	13	novel_not_in_catalog	PLEKHA2	novel	2127	9	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	108555.97886686414	NA	2	1	TRUE	NA	NA	NA	B	coding	425	1278	110	1387	25.0	20	True	AATAAA	-17
PB.11099.2	chr8	+	2431	2	novel_not_in_catalog	PLEKHA2	novel	2127	9	NA	NA	-930	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-3548	False	AATAAA	-17
PB.7611.5	chr22	-	3158	12	novel_not_in_catalog	UFD1	novel	1814	12	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	336339.005974725	NA	3	1	TRUE	NA	NA	NA	C	coding	272	819	199	1017	25.0	2	True	AATAAA	-13
PB.6189.5	chr19	-	3364	6	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-25	-929	any annotated donor/acceptor	FALSE	canonical	1	12243	junction_5	24431.305838206845	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	881	3256	35.0	-2	True	AATAAA	-36
PB.8560.2	chr3	+	3551	20	novel_in_catalog	ABCF3	novel	2624	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	379104	junction_9	83002.77710926553	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	48	1442	5.0	-38	True	ATTAAA	-15
PB.10878.5	chr7	+	2615	11	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-30	-36	any annotated donor/acceptor	FALSE	canonical	1	7968	junction_2	475682.20740284165	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	821	1840	80.0	-78	True	TATAAA	-18
PB.9560.7	chr5	+	4479	25	incomplete-splice_match	TCOF1	ENST00000642994.1	5038	27	5	1863	5	4	3prime_fragment	FALSE	canonical	1	220011	junction_7	110874.59286985254	NA	2	NA	TRUE	NA	NA	NA	B	coding	1475	4425	55	4479	70.0	-11	True	NA	NA
PB.10878.6	chr7	+	2797	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-29	-1141	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	431367.5898119524	NA	6	1	TRUE	NA	NA	NA	C	coding	335	1008	384	1391	35.0	-77	True	NA	NA
PB.6053.1	chr19	+	4343	5	full-splice_match	ZNF284	ENST00000421176.3	4351	5	7	1	7	-1	multi-exon	FALSE	canonical	1	16656	junction_1	9119.704912303907	NA	3	NA	TRUE	NA	NA	NA	A	coding	593	1782	210	1991	30.0	-10	True	AATAAA	-18
PB.10578.10	chr7	+	1960	8	novel_not_in_catalog	TMEM248	novel	4229	7	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	3168	junction_1	401066.9031703986	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	386	1330	30.0	6	True	AATAAA	-20
PB.10578.13	chr7	+	3068	5	incomplete-splice_match	TMEM248	ENST00000341567.8	4229	7	17	5366	10	1850	3prime_fragment	FALSE	canonical	1	216373	junction_1	309189.9212525976	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	239	1099	25.0	17	True	ATTAAA	-16
PB.10578.12	chr7	+	6302	6	novel_in_catalog	TMEM248	novel	4229	7	NA	NA	10	0	intron_retention	FALSE	canonical	1	216373	junction_1	299435.8531583017	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	239	1099	0.0	17	True	AATAAA	-14
PB.7611.1	chr22	-	1806	12	full-splice_match	UFD1	ENST00000263202.14	1814	12	8	0	-5	0	multi-exon	FALSE	canonical	1	309899	junction_1	245700.3272830039	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	123	1046	10.0	7	False	ATTAAA	-15
PB.877.3	chr1	+	2740	5	full-splice_match	SDHC	ENST00000432287.6	460	5	-1	-2279	0	1551	multi-exon	FALSE	canonical	1	86	junction_2	243609.40910438477	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	26	433	55.0	0	True	AGTAAA	-7
PB.819.3	chr1	+	2830	3	novel_in_catalog	SLC25A44	novel	3662	4	NA	NA	13	0	no_combination_of_known_junctions	FALSE	canonical	1	2248	junction_1	117462.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	1965	2279	10.0	-15	True	ATTAAA	-20
PB.476.11	chr1	+	2425	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	47	782	-8	229	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	16	NA	TRUE	NA	NA	NA	C	coding	594	1785	21	1805	25.0	15	True	ACTAAA	-24
PB.8669.6	chr4	-	1992	12	novel_in_catalog	MFSD10	novel	1776	11	NA	NA	7	-2	intron_retention	FALSE	canonical	1	131872	junction_8	246843.8480675118	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1280	1717	25.0	-28	True	AATAAA	-21
PB.9560.6	chr5	+	4516	25	novel_in_catalog	TCOF1	novel	4194	23	NA	NA	0	-1586	combination_of_known_junctions	FALSE	canonical	1	40055	junction_18	151248.40847826004	NA	0	NA	TRUE	NA	NA	NA	B	coding	1485	4455	60	4514	15.0	-16	True	AAGAAA	-12
PB.4295.2	chr16	+	1339	4	novel_not_in_catalog	LYRM1	novel	857	5	NA	NA	-61	0	any annotated donor/acceptor	FALSE	canonical	1	1943	junction_1	158392.7782788372	NA	7	NA	TRUE	NA	NA	NA	C	coding	122	369	83	451	15.0	1	True	AATAAA	-15
PB.4295.1	chr16	+	1380	4	full-splice_match	LYRM1	ENST00000439021.5	1558	4	178	0	2	0	multi-exon	FALSE	canonical	1	106755	junction_1	111217.51665492667	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	124	492	15.0	0	True	AATAAA	-15
PB.8560.9	chr3	+	2449	21	full-splice_match	ABCF3	ENST00000429586.6	2624	21	172	3	-1	-1	multi-exon	FALSE	canonical	1	379104	junction_9	83556.77294467218	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	14	2143	5.0	-4	True	ATTAAA	-14
PB.8763.9	chr4	-	2410	6	full-splice_match	GNPDA2	ENST00000509756.1	5382	6	-15	2987	10	179	multi-exon	FALSE	canonical	1	146530	junction_3	36221.16219780917	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	123	902	50.0	-5	True	AATATA	-14
PB.8763.8	chr4	-	4190	6	full-splice_match	GNPDA2	ENST00000509756.1	5382	6	-11	1203	-11	-1203	multi-exon	FALSE	canonical	1	146530	junction_3	36221.16219780917	NA	3	NA	TRUE	NA	NA	NA	C	coding	259	780	119	898	35.0	-1	True	TATAAA	-32
PB.8763.1	chr4	-	2160	7	full-splice_match	GNPDA2	ENST00000295448.7	1930	7	32	-262	7	-9	multi-exon	TRUE	canonical	1	146530	junction_4	33117.71417945722	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	126	956	50.0	-8	True	AATAAA	-7
PB.9174.13	chr5	+	1988	2	incomplete-splice_match	RAI14	ENST00000507883.1	773	3	3727	-1690	3699	-3	5prime_fragment	FALSE	canonical	1	505517	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	1304	1615	10.0	-9688	False	AATAAA	-13
PB.9174.10	chr5	+	3581	17	full-splice_match	RAI14	ENST00000512629.5	2941	17	-27	-613	1	460	multi-exon	FALSE	canonical	1	210622	junction_10	90064.89885667169	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	113	2968	65.0	10	True	NA	NA
PB.9174.11	chr5	+	2984	17	full-splice_match	RAI14	ENST00000512629.5	2941	17	-25	-18	3	-2	multi-exon	FALSE	canonical	1	210622	junction_10	90064.89885667169	NA	1	NA	TRUE	NA	NA	NA	C	coding	951	2856	111	2966	15.0	12	True	AGTAAA	-18
PB.8763.5	chr4	-	1908	7	full-splice_match	GNPDA2	ENST00000295448.7	1930	7	13	9	6	-9	multi-exon	FALSE	canonical	1	146530	junction_4	33117.71417945722	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	145	975	40.0	-27	True	AATAAA	-23
PB.2880.10	chr12	-	2340	14	full-splice_match	SSH1	ENST00000551165.5	2354	14	7	7	7	0	multi-exon	FALSE	canonical	1	82225	junction_13	30064.463580228134	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	88	2166	30.0	-1	True	ATTAAA	-19
PB.8763.7	chr4	-	5456	6	full-splice_match	GNPDA2	ENST00000509756.1	5382	6	-74	0	-24	0	multi-exon	FALSE	canonical	1	146530	junction_3	36221.16219780917	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	182	961	25.0	-2	True	AATAAA	-25
PB.8763.6	chr4	-	3160	7	novel_not_in_catalog	GNPDA2	novel	570	2	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	7188	junction_1	70848.6341199791	NA	3	NA	TRUE	NA	NA	NA	C	coding	259	780	146	925	25.0	-28	True	AATAAA	-25
PB.4277.1	chr16	-	3008	10	novel_in_catalog	AC126755.2	novel	1522	10	NA	NA	-442	2	intron_retention	FALSE	canonical	1	1582	junction_6	23277.6175380324	NA	1	NA	TRUE	NA	NA	NA	A	coding	73	222	348	569	70.0	NA	False	AAGAAA	-7
PB.2930.11	chr12	-	1972	5	incomplete-splice_match	TBX3	ENST00000257566.7	4208	8	-648	7332	-74	5	3prime_fragment	FALSE	canonical	1	136750	junction_2	100789.0210200868	NA	4	NA	TRUE	NA	NA	NA	C	coding	311	933	1039	1971	55.0	1650	False	NA	NA
PB.2930.10	chr12	-	3557	7	full-splice_match	TBX3	ENST00000349155.6	4723	7	-11	1177	-11	-1176	multi-exon	FALSE	canonical	1	224887	junction_5	52849.43410424457	NA	3	NA	TRUE	NA	NA	NA	C	coding	723	2172	976	3147	65.0	-1	True	AAAACA	-10
PB.2930.12	chr12	-	1646	4	incomplete-splice_match	TBX3	ENST00000349155.6	4723	7	186	7339	186	-1	3prime_fragment	FALSE	canonical	1	224887	junction_2	66435.39557093543	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	867	779	1645	50.0	1910	False	AATAGA	-45
PB.7043.28	chr2	-	2023	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	1	-9	no_combination_of_known_junctions	FALSE	canonical	1	2863	junction_2	674392.0003714911	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	212	1318	45.0	-2	True	AATAAA	-15
PB.7043.29	chr2	-	1832	8	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	no_combination_of_known_junctions	FALSE	canonical	1	2706	junction_7	717903.534928998	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	423	1127	45.0	-5	True	AATAAA	-15
PB.4939.2	chr17	-	2549	10	incomplete-splice_match	PCGF2	ENST00000620225.4	2604	11	278	1	157	0	5prime_fragment	TRUE	canonical	1	27223	junction_9	193313.46481955986	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	190	1224	10.0	1800	False	AATAAA	-15
PB.4939.3	chr17	-	2318	10	full-splice_match	PCGF2	ENST00000611883.4	2179	10	-932	793	624	-29	multi-exon	FALSE	canonical	1	2938	junction_9	200350.18414198773	NA	3	NA	TRUE	NA	NA	NA	C	coding	344	1035	1134	2168	60.0	-3	True	NA	NA
PB.7043.26	chr2	-	2129	9	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	833	junction_8	679737.8592683611	NA	2	1	TRUE	NA	NA	NA	C	coding	397	1194	231	1424	45.0	-3	True	AATAAA	-15
PB.4939.1	chr17	-	2483	10	novel_in_catalog	PCGF2	novel	2604	11	NA	NA	27	0	intron_retention	FALSE	canonical	1	25932	junction_9	193686.4048507277	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	124	1158	10.0	1549	False	AATAAA	-15
PB.7043.20	chr2	-	2375	11	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	857913.6199711716	NA	3	2	TRUE	NA	NA	NA	C	coding	397	1194	477	1670	45.0	-3	True	AATAAA	-15
PB.7043.21	chr2	-	2318	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	1052	junction_9	797834.4972559034	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	420	1613	45.0	-5	True	AATAAA	-15
PB.5469.1	chr18	-	1425	3	full-splice_match	IER3IP1	ENST00000256433.5	3689	3	57	2207	45	1841	multi-exon	FALSE	canonical	1	706465	junction_1	150071.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	44	True	AATAAA	-20
PB.7043.23	chr2	-	2270	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	798279.5940718892	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	372	1565	45.0	-1	True	AATAAA	-15
PB.10083.2	chr6	-	5475	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	24	608	-3	-608	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	3	NA	TRUE	NA	NA	NA	C	coding	542	1629	94	1722	45.0	-13	True	NA	NA
PB.10083.3	chr6	-	2681	14	full-splice_match	PGM3	ENST00000512866.5	2013	14	-19	-649	-2	-608	multi-exon	FALSE	canonical	1	13800	junction_1	117825.44090993804	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	75	1775	45.0	6	True	NA	NA
PB.9265.1	chr5	+	1391	9	full-splice_match	CENPH	ENST00000283006.6	1389	9	-4	2	-4	-1	multi-exon	TRUE	canonical	1	317214	junction_1	57805.99343439657	NA	0	NA	TRUE	NA	NA	NA	A	coding	247	744	92	835	10.0	-39	True	AATAAA	-13
PB.8779.24	chr4	+	2181	19	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	269392.65639314585	NA	32	6	TRUE	NA	NA	NA	C	coding	235	708	199	906	50.0	-2	True	AATAAA	-24
PB.617.5	chr1	+	2843	3	full-splice_match	CAPZA1	ENST00000485542.5	739	3	13	-2117	-1	2117	multi-exon	FALSE	canonical	1	891238	junction_2	274893.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-14	True	NA	NA
PB.11625.22	chr9	-	2689	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	4	18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835322.5098568797	NA	2	1	TRUE	NA	NA	NA	B	coding	438	1317	202	1518	20.0	352	False	AATAAA	-19
PB.10083.1	chr6	-	6093	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	12	2	12	-2	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	106	1734	20.0	-25	True	AATAAA	-19
PB.10083.6	chr6	-	3195	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	22	2890	-5	765	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	96	1724	50.0	-15	True	ATTAAA	-34
PB.10083.7	chr6	-	2694	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	29	3384	1	271	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	89	1717	70.0	-8	True	ATTAAA	-30
PB.9299.20	chr5	+	1873	11	incomplete-splice_match	POLK	ENST00000241436.8	5911	15	40715	4444	0	-1288	internal_fragment	FALSE	canonical	1	106081	junction_9	28744.96164547798	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1809	65	1873	55.0	NA	False	TTTAAA	-37
PB.10083.4	chr6	-	4363	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	30	1714	2	-457	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	88	1716	25.0	-7	True	NA	NA
PB.12078.2	chrX	-	2804	9	full-splice_match	PRICKLE3	ENST00000599218.5	2062	9	7	-749	4	459	multi-exon	FALSE	canonical	1	41692	junction_8	25206.691398317234	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	89	1936	25.0	-13	True	AATAAA	-15
PB.12078.3	chrX	-	2542	9	full-splice_match	PRICKLE3	ENST00000599218.5	2062	9	-8	-472	-8	182	multi-exon	FALSE	canonical	1	41692	junction_8	25206.691398317234	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	104	1951	35.0	-28	True	NA	NA
PB.12078.1	chrX	-	3094	8	novel_not_in_catalog	PRICKLE3	novel	2246	8	NA	NA	14	459	intron_retention	FALSE	canonical	1	245	junction_6	43203.60806266825	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	733	2226	25.0	-3	True	AATAAA	-15
PB.12078.4	chrX	-	2406	9	full-splice_match	PRICKLE3	ENST00000599218.5	2062	9	7	-351	4	61	multi-exon	FALSE	canonical	1	41692	junction_8	25206.691398317234	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	89	1936	25.0	-13	True	NA	NA
PB.12078.5	chrX	-	2072	9	full-splice_match	PRICKLE3	ENST00000599218.5	2062	9	-8	-2	-8	2	multi-exon	FALSE	canonical	1	41692	junction_8	25206.691398317234	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	104	1951	10.0	-28	True	CATAAA	-21
PB.8532.11	chr3	+	4881	17	novel_not_in_catalog	MFN1	novel	5224	18	NA	NA	23	-64	intron_retention	FALSE	canonical	1	800	junction_4	115613.58725884849	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	2912	3979	30.0	-6	True	ATTAAA	-24
PB.6225.1	chr19	-	2643	1	antisense	novelGene_CCDC106_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	105	318	71	388	95.0	6182	False	NA	NA
PB.4336.9	chr16	+	4279	22	incomplete-splice_match	ATXN2L	ENST00000564304.5	3514	23	55	-269	55	-27	intron_retention	TRUE	canonical	1	93203	junction_10	402795.15688157384	NA	5	NA	TRUE	NA	NA	NA	C	coding	1081	3246	111	3356	75.0	-9946	False	NA	NA
PB.4336.8	chr16	+	3848	24	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	23	-27	no_combination_of_known_junctions	FALSE	canonical	1	52177	junction_22	407011.0643892176	NA	1	NA	TRUE	NA	NA	NA	C	coding	1079	3240	143	3382	75.0	48	True	NA	NA
PB.4336.7	chr16	+	3918	24	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-7	-27	no_combination_of_known_junctions	FALSE	canonical	1	21257	junction_23	415681.615469256	NA	1	NA	TRUE	NA	NA	NA	C	coding	1079	3240	233	3472	75.0	-42	True	NA	NA
PB.4336.6	chr16	+	4157	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-18	-27	intron_retention	FALSE	canonical	1	26535	junction_22	400298.58730620187	NA	6	NA	TRUE	NA	NA	NA	C	coding	1075	3228	244	3471	75.0	-53	True	NA	NA
PB.4336.5	chr16	+	3790	23	full-splice_match	ATXN2L	ENST00000382686.8	3739	23	-91	40	-33	-18	multi-exon	FALSE	canonical	1	87736	junction_22	395572.5899053336	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	259	3393	85.0	-68	True	NA	NA
PB.4336.4	chr16	+	3869	23	full-splice_match	ATXN2L	ENST00000570200.5	3635	23	-252	18	-35	-18	multi-exon	FALSE	canonical	1	32362	junction_22	399833.5202330574	NA	2	1	TRUE	NA	NA	NA	C	coding	1062	3189	261	3449	85.0	-70	True	NA	NA
PB.9016.11	chr4	-	3138	5	full-splice_match	SLC10A7	ENST00000394059.8	1730	5	-44	-1364	-6	1364	multi-exon	FALSE	canonical	1	67754	junction_1	8043.274904384408	NA	3	NA	TRUE	NA	NA	NA	C	coding	159	480	223	702	90.0	-28	True	NA	NA
PB.4336.2	chr16	+	3787	23	full-splice_match	ATXN2L	ENST00000340394.12	3807	23	-20	40	-7	-18	multi-exon	FALSE	canonical	1	197006	junction_1	386608.16732589976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	233	3367	85.0	-42	True	NA	NA
PB.4336.1	chr16	+	4172	22	full-splice_match	ATXN2L	ENST00000336783.8	4367	22	146	49	-13	-27	multi-exon	FALSE	canonical	1	197006	junction_1	378228.9594735082	NA	1	NA	TRUE	NA	NA	NA	C	coding	1075	3228	22	3249	75.0	10	True	NA	NA
PB.10083.9	chr6	-	2034	13	full-splice_match	PGM3	ENST00000513973.5	6107	13	37	4036	-1	214	multi-exon	FALSE	canonical	1	289550	junction_10	68851.47003937776	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	81	1709	10.0	0	True	ATTAAA	-13
PB.11813.2	chr9	-	2642	2	full-splice_match	NAIF1	ENST00000373078.4	3399	2	-21	778	-21	-21	multi-exon	FALSE	canonical	1	80228	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	242	1225	90.0	-23	True	NA	NA
PB.11813.1	chr9	-	3420	2	full-splice_match	NAIF1	ENST00000373078.4	3399	2	-21	0	-21	0	multi-exon	FALSE	canonical	1	80228	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	242	1225	10.0	-23	True	ATTAAA	-24
PB.332.1	chr1	+	3402	11	novel_not_in_catalog	KCNQ4	novel	4297	14	NA	NA	-24	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	6632.810297302343	NA	1	NA	TRUE	NA	NA	NA	A	coding	356	1071	405	1475	10.0	NA	False	ATTAAA	-12
PB.9064.8	chr4	+	6274	14	full-splice_match	CLCN3	ENST00000347613.8	3635	14	0	-2639	0	1	multi-exon	FALSE	canonical	1	50478	junction_13	133132.94438467344	NA	5	NA	TRUE	NA	NA	NA	C	coding	866	2601	555	3155	15.0	-171	False	ATTAAA	-13
PB.1109.17	chr1	+	4259	14	full-splice_match	DTL	ENST00000542077.5	4471	14	218	-6	-75	6	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	2	NA	TRUE	NA	NA	NA	C	coding	688	2067	121	2187	30.0	-22	True	AATAAA	-21
PB.1109.14	chr1	+	3404	14	novel_in_catalog	DTL	novel	4471	14	NA	NA	-96	-163	no_combination_of_known_junctions	FALSE	canonical	1	2189	junction_13	80784.95811201342	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	142	1452	15.0	-43	True	AATAAA	-12
PB.1109.15	chr1	+	2978	15	full-splice_match	DTL	ENST00000366991.4	4573	15	186	1409	-83	-997	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	129	2321	25.0	-30	True	GATAAA	-34
PB.6782.10	chr2	-	3412	15	novel_not_in_catalog	STAM2	novel	5701	14	NA	NA	-5	1698	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	74858.59789248374	NA	1	1	TRUE	NA	NA	NA	C	coding	525	1578	93	1670	65.0	27	True	NA	NA
PB.1109.13	chr1	+	4332	16	novel_not_in_catalog	DTL	novel	4471	14	NA	NA	-96	-162	any annotated donor/acceptor	FALSE	canonical	1	58	junction_1	96874.51428294007	NA	2	NA	TRUE	NA	NA	NA	C	coding	668	2007	422	2428	15.0	-43	True	AATAAA	-13
PB.1109.10	chr1	+	2860	14	full-splice_match	DTL	ENST00000542077.5	4471	14	195	1416	-98	-1004	multi-exon	FALSE	canonical	1	8511	junction_1	78954.84764203851	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	144	2210	50.0	-45	True	GATAAA	-27
PB.1109.11	chr1	+	2806	3	novel_not_in_catalog	DTL	novel	4471	14	NA	NA	-97	-160	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	108453.5	NA	2	1	TRUE	NA	NA	NA	C	coding	232	699	202	900	10.0	-44	True	AATAAA	-15
PB.10564.2	chr7	+	2609	4	full-splice_match	ZNF138	ENST00000440598.2	2230	4	-31	-348	9	-1	multi-exon	FALSE	canonical	1	35190	junction_2	9631.878632956294	NA	1	1	TRUE	NA	NA	NA	C	coding	262	789	348	1136	25.0	-2	True	AATAAA	-28
PB.10564.3	chr7	+	2531	3	full-splice_match	ZNF138	ENST00000440155.6	1066	3	-26	-1439	11	0	multi-exon	FALSE	canonical	1	21506	junction_2	17760.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	171	1052	20.0	0	True	AATAAA	-34
PB.10564.1	chr7	+	2408	2	full-splice_match	ZNF138	ENST00000430838.2	2308	2	-97	-3	5	-2	multi-exon	FALSE	canonical	1	31673	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	413	931	25.0	-8885	False	AATAAA	-32
PB.7482.1	chr21	-	3574	15	full-splice_match	CCT8	ENST00000286788.8	2005	15	124	-1693	-34	1174	multi-exon	FALSE	canonical	1	354074	junction_11	926455.1183020147	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	84	1730	100.0	-44	True	NA	NA
PB.10564.4	chr7	+	2665	4	full-splice_match	ZNF138	ENST00000359735.7	2679	4	14	0	14	0	multi-exon	FALSE	canonical	1	5336	junction_2	21133.435441393704	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	668	1186	20.0	3	True	AATAAA	-34
PB.10564.5	chr7	+	2648	1	novel_in_catalog	ZNF138	novel	1141	4	NA	NA	14	-34754	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	51	156	168	323	80.0	3	True	NA	NA
PB.8563.21	chr3	+	5086	32	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	33982	junction_1	753358.2081753195	NA	0	NA	TRUE	NA	NA	NA	C	coding	1599	4800	141	4940	10.0	-37	True	AATAAA	-15
PB.9220.20	chr5	+	2263	14	incomplete-splice_match	PARP8	ENST00000514342.6	2384	24	960	17985	5	-17985	internal_fragment	FALSE	canonical	1	143991	junction_1	33692.17376053464	NA	3	NA	TRUE	NA	NA	NA	C	coding	329	990	824	1813	85.0	-412	False	ACTAAA	-18
PB.5826.5	chr19	-	2832	14	novel_in_catalog	JAK3	novel	2809	14	NA	NA	-4	1969	combination_of_known_junctions	FALSE	canonical	1	19039	junction_4	37204.99235015575	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	105	1661	85.0	-6	True	NA	NA
PB.10267.2	chr6	+	3736	13	novel_in_catalog	SASH1	novel	7711	20	NA	NA	186	-2987	combination_of_known_junctions	FALSE	canonical	1	17806	junction_1	42775.04351611528	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	207	3233	85.0	0	True	NA	NA
PB.10267.3	chr6	+	3043	10	incomplete-splice_match	SASH1	ENST00000367467.7	7711	20	182697	2985	877	-2983	5prime_fragment	FALSE	canonical	1	124322	junction_1	17197.326737419982	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	74	2536	85.0	NA	False	NA	NA
PB.10267.1	chr6	+	4157	20	full-splice_match	SASH1	ENST00000367467.7	7711	20	568	2986	568	-2984	multi-exon	FALSE	canonical	1	85116	junction_1	27865.228064288152	NA	0	NA	TRUE	NA	NA	NA	C	coding	1199	3600	52	3651	85.0	-8510	False	NA	NA
PB.9386.26	chr5	-	2527	6	full-splice_match	STARD4	ENST00000505803.5	803	6	-13	-1711	-13	-1224	multi-exon	FALSE	canonical	1	56844	junction_5	106670.86567643481	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	195	812	30.0	468	False	TTTAAA	-19
PB.4884.3	chr17	+	4024	14	incomplete-splice_match	ATAD5	ENST00000578295.5	4051	15	-2	6756	-2	-169	3prime_fragment	FALSE	canonical	1	40604	junction_7	25086.488120361082	NA	1	NA	TRUE	NA	NA	NA	B	coding	1198	3597	399	3995	75.0	-2	True	AGTAAA	-29
PB.4884.2	chr17	+	2483	4	incomplete-splice_match	ATAD5	ENST00000578295.5	4051	15	-3	35797	-3	-29210	3prime_fragment	FALSE	canonical	1	60584	junction_3	1963.1617921664588	NA	1	NA	TRUE	NA	NA	NA	B	coding	694	2082	400	2481	55.0	-3	True	AAAACA	-5
PB.4884.1	chr17	+	2442	3	incomplete-splice_match	ATAD5	ENST00000578295.5	4051	15	-69	39206	-69	-32619	3prime_fragment	FALSE	canonical	1	63189	junction_1	1099.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	659	1977	466	2442	70.0	-2529	False	AATGAA	-23
PB.4884.7	chr17	+	1793	2	incomplete-splice_match	ATAD5	ENST00000578295.5	4051	15	4	40939	4	-34352	3prime_fragment	FALSE	canonical	1	63189	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	467	1401	393	1793	75.0	4	True	GATAAA	-19
PB.4884.6	chr17	+	4703	20	novel_not_in_catalog	ATAD5	novel	4051	15	NA	NA	1	-3198	any annotated donor/acceptor	FALSE	canonical	1	7349	junction_9	26191.6719833866	NA	0	NA	TRUE	NA	NA	NA	B	coding	1436	4308	396	4703	70.0	1	True	NA	NA
PB.4884.5	chr17	+	3388	10	incomplete-splice_match	ATAD5	ENST00000578295.5	4051	15	0	15953	0	-9366	3prime_fragment	FALSE	canonical	1	40604	junction_7	10531.43530485028	NA	0	NA	TRUE	NA	NA	NA	B	coding	997	2991	397	3387	60.0	0	True	CATAAA	-29
PB.4884.4	chr17	+	2672	5	incomplete-splice_match	ATAD5	ENST00000578295.5	4051	15	-2	32476	-2	-25889	3prime_fragment	FALSE	canonical	1	57558	junction_4	2924.5097452393625	NA	1	NA	TRUE	NA	NA	NA	B	coding	758	2274	399	2672	60.0	-2	True	AATAGA	-32
PB.6306.1	chr2	-	2064	5	novel_in_catalog	YWHAQ	novel	2216	5	NA	NA	-18	2	no_combination_of_known_junctions	FALSE	canonical	1	24722	junction_2	1303334.6613949542	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	175	600	25.0	-64	False	AATAAA	-26
PB.7482.2	chr21	-	1962	15	full-splice_match	CCT8	ENST00000286788.8	2005	15	38	5	38	0	multi-exon	FALSE	canonical	1	354074	junction_11	926455.1183020147	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	170	1816	35.0	-130	False	AATAAA	-16
PB.6306.4	chr2	-	5247	5	novel_in_catalog	YWHAQ	novel	2216	5	NA	NA	15	-9	intron_retention	FALSE	canonical	1	1410037	junction_4	731471.9710831373	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	142	597	40.0	-31	True	AATAAA	-15
PB.6173.4	chr19	-	2341	5	full-splice_match	ZNF350	ENST00000243644.8	2338	5	-7	4	-6	-4	multi-exon	FALSE	canonical	1	85942	junction_4	13350.91705651713	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	236	1834	30.0	-5	True	ATTAAA	-11
PB.6306.7	chr2	-	1800	6	full-splice_match	YWHAQ	ENST00000238081.7	2208	6	38	370	-30	-370	multi-exon	FALSE	canonical	1	1410037	junction_5	702487.9131786966	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	119	856	50.0	-8	True	NA	NA
PB.1295.8	chr10	+	2961	17	novel_not_in_catalog	DHTKD1	novel	5159	17	NA	NA	-15	2151	any annotated donor/acceptor	FALSE	canonical	1	1960	junction_16	69228.67179319562	NA	1	NA	TRUE	NA	NA	NA	C	coding	899	2700	78	2777	65.0	0	True	NA	NA
PB.1295.9	chr10	+	3155	17	full-splice_match	DHTKD1	ENST00000263035.8	5159	17	-2	2006	-2	860	multi-exon	FALSE	canonical	1	139636	junction_10	44345.69096580157	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	65	2824	95.0	-39	True	NA	NA
PB.1295.4	chr10	+	3017	17	full-splice_match	DHTKD1	ENST00000263035.8	5159	17	-18	2160	-18	706	multi-exon	FALSE	canonical	1	139636	junction_10	44345.69096580157	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	81	2840	35.0	-3	True	NA	NA
PB.1295.5	chr10	+	2844	16	novel_in_catalog	DHTKD1	novel	5159	17	NA	NA	-18	698	no_combination_of_known_junctions	FALSE	canonical	1	22028	junction_12	66866.09047408776	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	81	2675	65.0	-3	True	NA	NA
PB.1295.6	chr10	+	4568	17	full-splice_match	DHTKD1	ENST00000263035.8	5159	17	-17	608	-17	-608	multi-exon	FALSE	canonical	1	139636	junction_10	44345.69096580157	NA	7	NA	TRUE	NA	NA	NA	C	coding	919	2760	80	2839	80.0	-2	True	NA	NA
PB.1295.7	chr10	+	2975	16	novel_in_catalog	DHTKD1	novel	5159	17	NA	NA	-17	860	combination_of_known_junctions	FALSE	canonical	1	7503	junction_3	69551.27804797456	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	80	2644	95.0	-2	True	NA	NA
PB.10408.11	chr7	+	2646	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	68	-588	0	588	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	120	944	70.0	-18	False	ATTAAA	-44
PB.1295.1	chr10	+	3033	16	novel_in_catalog	DHTKD1	novel	5159	17	NA	NA	-45	860	no_combination_of_known_junctions	TRUE	canonical	1	22028	junction_12	66866.09047408776	NA	1	NA	TRUE	NA	NA	NA	C	coding	864	2595	108	2702	95.0	-82	False	NA	NA
PB.1295.2	chr10	+	3389	17	full-splice_match	DHTKD1	ENST00000263035.8	5159	17	-21	1791	-21	1075	multi-exon	FALSE	canonical	1	139636	junction_10	44345.69096580157	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	84	2843	80.0	-6	True	NA	NA
PB.1295.3	chr10	+	4128	17	full-splice_match	DHTKD1	ENST00000263035.8	5159	17	-18	1049	-18	-1049	multi-exon	FALSE	canonical	1	139636	junction_10	44345.69096580157	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	81	2840	30.0	-3	True	AATGAA	-26
PB.5287.1	chr17	+	1926	6	novel_not_in_catalog	BIRC5	novel	2711	5	NA	NA	-19	840	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	353332.7932176124	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	74	451	30.0	-29	True	AATAAA	-15
PB.5287.3	chr17	+	2379	5	full-splice_match	BIRC5	ENST00000301633.8	2711	5	67	265	-10	-265	multi-exon	FALSE	canonical	1	46112	junction_2	393984.6989448797	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	65	562	30.0	-20	True	NA	NA
PB.5287.2	chr17	+	1707	5	full-splice_match	BIRC5	ENST00000301633.8	2711	5	64	940	-13	840	multi-exon	FALSE	canonical	1	46112	junction_2	393984.6989448797	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	68	565	30.0	-23	True	AATAAA	-15
PB.5287.5	chr17	+	1515	3	full-splice_match	BIRC5	ENST00000374948.6	2446	3	-3	934	-2	846	multi-exon	FALSE	canonical	1	61410	junction_2	384759.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	137	414	57	470	10.0	-12	True	AATAAA	-21
PB.5287.4	chr17	+	2575	4	full-splice_match	BIRC5	ENST00000350051.7	2630	4	56	-1	-9	1	multi-exon	FALSE	canonical	1	590991	junction_2	119120.48618753852	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	64	492	0.0	-19	True	AATAAA	-23
PB.5287.7	chr17	+	1995	4	full-splice_match	BIRC5	ENST00000350051.7	2630	4	81	554	-1	-554	multi-exon	FALSE	canonical	1	590991	junction_2	119120.48618753852	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	39	467	35.0	6	True	NA	NA
PB.5287.6	chr17	+	2292	4	full-splice_match	BIRC5	ENST00000350051.7	2630	4	73	265	7	-265	multi-exon	FALSE	canonical	1	590991	junction_2	119120.48618753852	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	47	475	30.0	-2	True	NA	NA
PB.5287.8	chr17	+	1612	4	full-splice_match	BIRC5	ENST00000350051.7	2630	4	82	936	0	844	multi-exon	FALSE	canonical	1	590991	junction_2	119120.48618753852	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	38	466	15.0	7	True	AATAAA	-19
PB.6173.1	chr19	-	2736	5	full-splice_match	ZNF350	ENST00000243644.8	2338	5	-34	-364	-4	364	multi-exon	FALSE	canonical	1	85942	junction_4	13350.91705651713	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	263	1861	50.0	-32	False	NA	NA
PB.10008.1	chr6	+	1277	3	full-splice_match	MAD2L1BP	ENST00000372171.4	1301	3	21	3	-19	-3	multi-exon	FALSE	canonical	1	397078	junction_1	169.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	274	825	37	861	30.0	0	True	AATAAA	-24
PB.330.2	chr1	+	1857	9	novel_in_catalog	NFYC	novel	943	6	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	7494	junction_7	136502.77706967862	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	187	1086	25.0	-7605	False	AATAAA	-12
PB.11097.1	chr8	+	3256	2	incomplete-splice_match	TACC1	ENST00000518415.5	3011	15	13709	100085	13709	2695	internal_fragment	FALSE	canonical	1	18212	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.9988.1	chr6	-	1896	5	full-splice_match	CCND3	ENST00000372988.8	2133	5	259	-22	-1	0	multi-exon	FALSE	canonical	1	143732	junction_4	514829.63083286106	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	255	890	15.0	-22	True	AATAAA	-37
PB.10189.4	chr6	-	5078	13	full-splice_match	MCM9	ENST00000316316.10	5101	13	-2	25	-2	-18	multi-exon	FALSE	canonical	1	21845	junction_12	16224.449689991201	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3432	290	3721	50.0	-6	True	AATAAA	-9
PB.9988.3	chr6	-	1677	4	full-splice_match	CCND3	ENST00000415497.6	1843	4	162	4	-24	-4	multi-exon	FALSE	canonical	1	129114	junction_3	592561.8374236472	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-45	True	AATAAA	-11
PB.9988.2	chr6	-	3033	3	novel_in_catalog	CCND3	novel	2085	5	NA	NA	16	-3	intron_retention	FALSE	canonical	1	765633	junction_1	33300.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	184	810	30.0	15	True	AATAAA	-12
PB.4417.2	chr16	+	2137	7	full-splice_match	CNEP1R1	ENST00000458059.7	2965	7	818	10	-6	-2	multi-exon	FALSE	canonical	1	42460	junction_2	23225.33340569206	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	89	517	20.0	3	True	AATAAA	-12
PB.9988.4	chr6	-	1503	5	full-splice_match	CCND3	ENST00000372991.8	2085	5	54	528	-28	-26	multi-exon	FALSE	canonical	1	765633	junction_3	295427.0985373337	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	146	1024	15.0	4799	False	NA	NA
PB.10189.3	chr6	-	5213	14	novel_in_catalog	MCM9	novel	5101	13	NA	NA	-3	-18	combination_of_known_junctions	FALSE	canonical	1	15900	junction_13	18181.768186579997	NA	1	NA	TRUE	NA	NA	NA	C	coding	1143	3432	425	3856	50.0	-7	True	AATAAA	-9
PB.10189.2	chr6	-	4591	6	novel_in_catalog	MCM9	novel	5101	13	NA	NA	-797	-18	combination_of_known_junctions	FALSE	canonical	1	12132	junction_5	16083.014936261174	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	1042	3234	50.0	-39	False	AATAAA	-9
PB.1289.3	chr10	+	2463	14	novel_in_catalog	CELF2	novel	2724	15	NA	NA	80	5	combination_of_known_junctions	FALSE	canonical	1	53605	junction_1	123151.64288640772	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	45	1592	80.0	-3	True	NA	NA
PB.1289.2	chr10	+	2557	13	novel_in_catalog	CELF2	novel	2724	15	NA	NA	-51	5	combination_of_known_junctions	FALSE	canonical	1	53605	junction_1	141607.03065584938	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	844	1686	80.0	-91	True	NA	NA
PB.1289.1	chr10	+	2486	14	novel_in_catalog	CELF2	novel	2724	15	NA	NA	69	5	combination_of_known_junctions	FALSE	canonical	1	53605	junction_1	132281.06433816545	NA	2	1	TRUE	NA	NA	NA	C	coding	519	1560	56	1615	80.0	-14	False	NA	NA
PB.6699.6	chr2	-	2439	7	incomplete-splice_match	CKAP2L	ENST00000302450.10	4533	9	39	5522	-20	302	3prime_fragment	FALSE	canonical	1	126122	junction_1	19570.310572111237	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	41	1987	40.0	-30	True	AATAAA	-21
PB.1289.7	chr10	+	2938	14	novel_in_catalog	CELF2	novel	2724	15	NA	NA	17	305	combination_of_known_junctions	FALSE	canonical	1	117164	junction_1	113523.63253025294	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	291	1745	90.0	-6117	False	TATAAA	-13
PB.1289.6	chr10	+	2568	14	novel_in_catalog	CELF2	novel	2724	15	NA	NA	-45	5	combination_of_known_junctions	FALSE	canonical	1	117164	junction_1	113523.63253025294	NA	1	1	TRUE	NA	NA	NA	C	coding	484	1455	243	1697	80.0	-2	True	NA	NA
PB.1289.5	chr10	+	2794	14	full-splice_match	CELF2	ENST00000608830.5	1892	14	-259	-643	-149	5	multi-exon	FALSE	canonical	1	64216	junction_10	123583.81688640716	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	457	1923	80.0	0	True	NA	NA
PB.1289.4	chr10	+	2477	14	novel_not_in_catalog	CELF2	novel	2724	15	NA	NA	-513	25	any annotated donor/acceptor	FALSE	canonical	1	213	junction_1	132377.91072554048	NA	2	NA	TRUE	NA	NA	NA	C	coding	484	1455	110	1564	50.0	-6647	False	NA	NA
PB.6524.25	chr2	-	2432	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	22	6178	22	-6178	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	156	2201	40.0	-10	True	NA	NA
PB.6524.24	chr2	-	2745	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	20	5867	20	-5867	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	158	2203	30.0	-12	True	TTTAAA	-39
PB.1289.9	chr10	+	3844	12	novel_in_catalog	CELF2	novel	2724	15	NA	NA	-43	5	intron_retention	FALSE	canonical	1	94465	junction_5	136980.31938226058	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	773	1615	80.0	0	True	NA	NA
PB.1289.8	chr10	+	2422	14	novel_in_catalog	CELF2	novel	2724	15	NA	NA	132	6	no_combination_of_known_junctions	FALSE	canonical	1	4243	junction_10	133588.8747164224	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	66	1550	75.0	-6	True	NA	NA
PB.6524.20	chr2	-	3456	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	-2	5178	0	-5178	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	180	2225	20.0	-1	True	AATAAA	-15
PB.6524.23	chr2	-	3039	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	-1	5594	-1	-5594	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	179	2224	15.0	0	True	NA	NA
PB.6524.22	chr2	-	3058	19	full-splice_match	GFPT1	ENST00000361060.5	8632	19	19	5555	19	-5555	multi-exon	FALSE	canonical	1	345642	junction_18	138594.99723935846	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	159	2204	20.0	-13	True	TTTAAA	-16
PB.10353.8	chr7	+	4269	22	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	22052	junction_13	212920.3121397891	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	131	2698	40.0	-26	True	AATAAA	-22
PB.10353.9	chr7	+	3910	19	novel_in_catalog	SUN1	novel	520	4	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	27364	junction_5	212779.59098383217	NA	2	1	TRUE	NA	NA	NA	B	coding	735	2208	131	2338	40.0	-26	True	AATAAA	-23
PB.8238.1	chr3	-	4485	6	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18570	243920	any annotated donor/acceptor	FALSE	canonical	1	236	junction_1	2648.833056272139	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-18	False	NA	NA
PB.10353.2	chr7	+	4221	21	novel_in_catalog	SUN1	novel	520	4	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	15529	junction_6	212866.14515967536	NA	0	NA	TRUE	NA	NA	NA	B	coding	838	2517	133	2649	40.0	-28	True	AATAAA	-23
PB.5970.1	chr19	-	2271	5	full-splice_match	ZNF573	ENST00000536220.5	2257	5	-14	0	-14	0	multi-exon	FALSE	canonical	1	24274	junction_3	7269.365223319021	NA	0	NA	TRUE	NA	NA	NA	A	coding	665	1998	84	2081	90.0	-19	True	NA	NA
PB.10353.1	chr7	+	3940	4	incomplete-splice_match	SUN1	ENST00000450538.5	570	5	-2	-2532	-2	1666	intron_retention	FALSE	canonical	1	272684	junction_1	137169.31441348925	NA	0	NA	TRUE	NA	NA	NA	B	coding	204	615	82	696	65.0	-30	True	NA	NA
PB.10353.6	chr7	+	4612	24	novel_in_catalog	SUN1	novel	520	4	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	890	junction_1	221943.5643584049	NA	0	NA	TRUE	NA	NA	NA	B	coding	936	2811	235	3045	40.0	-26	True	AATAAA	-18
PB.10353.7	chr7	+	4372	23	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	2	6	any annotated donor/acceptor	FALSE	canonical	1	22052	junction_14	190775.60431246753	NA	0	NA	TRUE	NA	NA	NA	B	coding	905	2718	78	2795	35.0	-26	True	AATAAA	-28
PB.10353.4	chr7	+	4089	20	novel_in_catalog	SUN1	novel	520	4	NA	NA	0	-5	no_combination_of_known_junctions	FALSE	canonical	1	6328	junction_3	222680.34710651773	NA	3	NA	TRUE	NA	NA	NA	B	coding	797	2394	133	2526	45.0	-28	True	AATAAA	-14
PB.10353.5	chr7	+	4541	22	novel_in_catalog	SUN1	novel	520	4	NA	NA	1	1	intron_retention	FALSE	canonical	1	272684	junction_1	152960.49670160533	NA	0	NA	TRUE	NA	NA	NA	B	coding	424	1275	1697	2971	35.0	-27	True	AATAAA	-21
PB.9350.1	chr5	-	5656	43	full-splice_match	TTC37	ENST00000358746.6	5706	43	30	20	0	-20	multi-exon	FALSE	canonical	1	222162	junction_41	113865.05175672805	NA	0	NA	TRUE	NA	NA	NA	C	coding	1564	4695	270	4964	70.0	-1	True	NA	NA
PB.9350.2	chr5	-	5650	43	novel_not_in_catalog	TTC37	novel	8038	44	NA	NA	0	-3	any annotated donor/acceptor	TRUE	canonical	1	3987	junction_15	148870.63617702734	NA	2	1	TRUE	NA	NA	NA	C	coding	987	2964	270	3233	20.0	-1	True	AATAAA	-11
PB.2515.9	chr12	-	2631	17	novel_in_catalog	INTS13	novel	1378	8	NA	NA	-57	-1	no_combination_of_known_junctions	FALSE	canonical	1	17098	junction_6	123517.6296189637	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	246	1556	45.0	-50	True	AATAAA	-22
PB.781.5	chr1	-	1490	8	full-splice_match	KCNN3	ENST00000361147.8	1962	8	-33	505	-33	21	multi-exon	FALSE	canonical	1	43896	junction_7	29440.210955460916	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	189	1445	25.0	-1	True	AATAAA	-41
PB.9350.9	chr5	-	5917	41	novel_in_catalog	TTC37	novel	8038	44	NA	NA	-11	-20	intron_retention	FALSE	canonical	1	222162	junction_39	115758.43277536792	NA	1	1	TRUE	NA	NA	NA	C	coding	816	2451	281	2731	70.0	-12	True	NA	NA
PB.8672.2	chr4	+	4402	31	incomplete-splice_match	HTT	ENST00000355072.10	13475	67	3	70735	3	-2	3prime_fragment	FALSE	canonical	1	38461	junction_1	64084.264210222114	NA	1	NA	TRUE	NA	NA	NA	C	coding	1389	4170	143	4312	30.0	-6	True	AATAAA	-18
PB.8238.2	chr3	-	2937	6	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18581	158453	any annotated donor/acceptor	FALSE	canonical	1	238	junction_4	2517.024004653114	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-7	True	AATAAA	-15
PB.9064.9	chr4	+	6135	13	full-splice_match	CLCN3	ENST00000513761.5	6692	13	73	484	42	2	multi-exon	FALSE	canonical	1	228621	junction_5	82839.93200087576	NA	3	NA	TRUE	NA	NA	NA	C	coding	818	2457	487	2943	20.0	16	True	ATTAAA	-18
PB.9767.7	chr6	-	3176	9	novel_not_in_catalog	TPMT	novel	3181	9	NA	NA	-8	-1402	any annotated donor/acceptor	FALSE	canonical	1	3950	junction_2	97063.83461155859	NA	18	NA	TRUE	NA	NA	NA	C	coding	194	585	95	679	15.0	-6	True	AATAAA	-18
PB.817.6	chr1	+	3132	11	novel_in_catalog	LMNA	novel	570	4	NA	NA	0	-12	intron_retention	FALSE	canonical	1	1221595	junction_10	3195445.605578585	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	209	1927	80.0	0	True	NA	NA
PB.6910.1	chr2	-	3160	26	novel_in_catalog	STAT1	novel	663	3	NA	NA	7	6	combination_of_known_junctions	FALSE	canonical	1	2389	junction_1	383000.1684601739	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	360	2612	10.0	6796	False	ACTAAA	-20
PB.817.4	chr1	+	4348	9	novel_in_catalog	LMNA	novel	570	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	3486694	junction_1	2814786.780670582	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	213	1430	0.0	-4	True	AATACA	-22
PB.5297.1	chr17	+	4220	5	full-splice_match	CBX2	ENST00000310942.8	4644	5	20	404	-11	-404	multi-exon	FALSE	canonical	1	120522	junction_4	13603.840034618901	NA	1	NA	TRUE	NA	NA	NA	A	coding	532	1599	85	1683	5.0	1	True	AATAAA	-35
PB.817.2	chr1	+	2299	12	novel_not_in_catalog	LMNA	novel	570	4	NA	NA	-2	-12	intron_retention	FALSE	canonical	1	51	junction_11	3274828.4447881673	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2046	252	2297	80.0	-6405	False	NA	NA
PB.817.3	chr1	+	2346	13	novel_not_in_catalog	LMNA	novel	570	4	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_12	3521306.69046738	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	214	2208	75.0	-5	True	AAAACA	-6
PB.817.1	chr1	+	2229	11	novel_in_catalog	LMNA	novel	570	4	NA	NA	7	1	intron_retention	FALSE	canonical	1	10618	junction_1	3430495.2877323064	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	409	2127	0.0	-8114	False	ATTAAA	-19
PB.8811.1	chr4	+	2002	14	incomplete-splice_match	RUFY3	ENST00000381006.7	3098	18	55	12500	39	1258	3prime_fragment	FALSE	canonical	1	69833	junction_12	81822.12367210361	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1476	525	2000	75.0	1	True	NA	NA
PB.819.5	chr1	+	2700	2	novel_in_catalog	SLC25A44	novel	3662	4	NA	NA	14	-1	no_combination_of_known_junctions	FALSE	canonical	1	3246	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	101	306	32	337	10.0	-14	True	ATTAAA	-19
PB.8672.1	chr4	+	10178	67	full-splice_match	HTT	ENST00000355072.10	13475	67	0	3297	0	-3277	multi-exon	TRUE	canonical	1	38461	junction_1	87376.92242688876	NA	1	NA	TRUE	NA	NA	NA	C	coding	3142	9429	146	9574	25.0	-9	True	AGTAAA	-24
PB.2515.3	chr12	-	2563	17	full-splice_match	INTS13	ENST00000261191.11	2974	17	323	88	-26	-84	multi-exon	FALSE	canonical	1	234503	junction_16	88509.7959619972	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	215	2335	30.0	-19	True	NA	NA
PB.10173.4	chr6	-	2269	14	novel_not_in_catalog	HDAC2	novel	9874	14	NA	NA	-76	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	584864.0669364597	NA	3	NA	TRUE	NA	NA	NA	C	coding	585	1758	172	1929	15.0	-1	True	ATTAAA	-14
PB.9767.3	chr6	-	2756	9	full-splice_match	TPMT	ENST00000309983.4	3181	9	-2	427	-2	-427	multi-exon	FALSE	canonical	1	76134	junction_3	82246.895920815	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	89	826	80.0	0	True	NA	NA
PB.8811.2	chr4	+	4328	12	incomplete-splice_match	RUFY3	ENST00000226328.8	4233	13	-110	1647	-94	-1647	intron_retention	FALSE	canonical	1	84262	junction_8	82434.79814660235	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	674	2014	90.0	-781	False	NA	NA
PB.12044.2	chrX	+	4826	11	full-splice_match	JADE3	ENST00000614628.4	4934	11	114	-6	114	5	multi-exon	FALSE	canonical	1	39767	junction_1	16938.252684382765	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	185	2656	10.0	-95	False	ATTAAA	-21
PB.12044.1	chrX	+	4714	11	full-splice_match	JADE3	ENST00000611250.4	4713	11	-2	1	-2	0	multi-exon	FALSE	canonical	1	9256	junction_1	24708.744838417027	NA	1	NA	TRUE	NA	NA	NA	C	coding	823	2472	79	2550	15.0	-368	False	ATTAAA	-15
PB.9624.1	chr5	-	1561	2	full-splice_match	NKX2-5	ENST00000329198.4	1709	2	151	-3	0	3	multi-exon	FALSE	canonical	1	21926	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	324	975	124	1098	10.0	-1	True	ATTAAA	-17
PB.9315.15	chr5	+	3354	15	novel_in_catalog	TENT2	novel	781	5	NA	NA	1	-3	intron_retention	FALSE	canonical	1	151184	junction_6	88820.16045013517	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	540	1982	5.0	1	True	AATAAA	-18
PB.9315.14	chr5	+	2627	12	novel_in_catalog	TENT2	novel	781	5	NA	NA	10	13	intron_retention	FALSE	canonical	1	5482	junction_1	133454.21022579895	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1172	1621	40.0	4	True	AATAAA	-30
PB.9315.17	chr5	+	3169	15	novel_in_catalog	TENT2	novel	781	5	NA	NA	14	-6	combination_of_known_junctions	FALSE	canonical	1	32616	junction_1	137607.21891073498	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	390	1427	10.0	8	True	AATAAA	-15
PB.9315.16	chr5	+	3115	15	novel_in_catalog	TENT2	novel	781	5	NA	NA	13	14	intron_retention	FALSE	canonical	1	151184	junction_6	88820.16045013517	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	666	2108	35.0	7	True	AATAAA	-31
PB.9315.11	chr5	+	2759	16	full-splice_match	TENT2	ENST00000296783.7	3129	16	0	370	0	12	multi-exon	FALSE	canonical	1	42937	junction_1	111928.27259983163	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	300	1754	35.0	0	True	AATAAA	-29
PB.3350.8	chr14	+	1862	9	full-splice_match	GMPR2	ENST00000420554.6	1864	9	-1	3	-1	0	multi-exon	FALSE	canonical	1	484098	junction_2	136908.3914552332	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	355	1401	25.0	-5	True	AATAAA	-20
PB.5912.8	chr19	+	2358	12	novel_not_in_catalog	LSM14A	novel	559	4	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	757	junction_3	469493.6146327329	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	788	1597	25.0	-21	True	AATAAA	-15
PB.9315.12	chr5	+	2156	15	full-splice_match	TENT2	ENST00000453514.5	3523	15	21	1346	6	-28	multi-exon	FALSE	canonical	1	181099	junction_6	84288.01064647212	NA	4	1	TRUE	NA	NA	NA	C	coding	484	1455	673	2127	65.0	0	True	AATAAA	-8
PB.9315.19	chr5	+	2927	16	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	16	12	any annotated donor/acceptor	FALSE	canonical	1	2109	junction_1	119146.18863825322	NA	12	2	TRUE	NA	NA	NA	C	coding	484	1455	468	1922	35.0	10	True	AATAAA	-29
PB.9315.18	chr5	+	3392	16	novel_in_catalog	TENT2	novel	781	5	NA	NA	-17	-8	intron_retention	FALSE	canonical	1	25282	junction_2	137811.19122906285	NA	7	2	TRUE	NA	NA	NA	C	coding	480	1443	583	2025	15.0	-1519	False	AATAAA	-13
PB.8238.4	chr3	-	2985	6	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18551	158451	any annotated donor/acceptor	TRUE	canonical	1	35	junction_4	2555.3446734247027	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-37	False	AATAAA	-13
PB.9069.4	chr4	+	3836	11	novel_in_catalog	GALNT7	novel	4307	12	NA	NA	9	-1	no_combination_of_known_junctions	FALSE	canonical	1	3530	junction_1	117195.93827181043	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	283	1587	5.0	-439	False	AATAAA	-18
PB.3041.5	chr13	-	2702	2	full-splice_match	GJA3	ENST00000241125.3	5211	2	-38	2547	-38	-2547	multi-exon	FALSE	canonical	1	7566	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	216	1523	10.0	-36	True	AATAAA	-21
PB.3041.4	chr13	-	4414	2	full-splice_match	GJA3	ENST00000241125.3	5211	2	1	796	1	-796	multi-exon	FALSE	canonical	1	7566	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	177	1484	65.0	3	True	AATAAA	-29
PB.3041.2	chr13	-	5157	2	full-splice_match	GJA3	ENST00000241125.3	5211	2	46	8	46	-8	multi-exon	FALSE	canonical	1	7566	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	132	1439	30.0	9914	False	AATAAA	-11
PB.8461.29	chr3	-	3162	6	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	294	-1239	any annotated donor/acceptor	FALSE	canonical	1	293	junction_5	208279.34956917836	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	103	831	80.0	263	False	AAAAAG	-18
PB.5781.1	chr19	-	2840	10	novel_not_in_catalog	ADGRL1	novel	7853	24	NA	NA	2653	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	89727.18497895113	NA	3	NA	TRUE	NA	NA	NA	A	coding	400	1203	29	1231	85.0	5377	False	NA	NA
PB.3713.1	chr14	-	3755	3	novel_not_in_catalog	IGHV3-29	novel	344	2	NA	NA	-3732	2511	any annotated donor/acceptor	FALSE	canonical	1	391	junction_1	13332.0	NA	5	NA	TRUE	NA	NA	NA	A	coding	173	522	80	601	40.0	NA	False	NA	NA
PB.3713.3	chr14	-	2711	2	full-splice_match	IGHV3-33	ENST00000390615.2	431	2	1	-2281	1	2281	multi-exon	FALSE	canonical	1	27055	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	80	601	25.0	NA	False	AATAAA	-34
PB.3713.2	chr14	-	3164	2	full-splice_match	IGHV3-33	ENST00000390615.2	431	2	1	-2734	1	2734	multi-exon	FALSE	canonical	1	27055	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	80	601	35.0	NA	False	NA	NA
PB.787.25	chr1	-	2615	13	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-6892	-3695	any annotated donor/acceptor	FALSE	canonical	1	7171	junction_1	541501.7008264237	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	220	2145	25.0	1	True	NA	NA
PB.787.24	chr1	-	2125	13	full-splice_match	SHC1	ENST00000368453.8	3062	13	-92	1029	-73	2	multi-exon	FALSE	canonical	1	212717	junction_12	420310.13869207836	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	225	1649	25.0	-22	False	NA	NA
PB.212.4	chr1	-	2482	12	novel_in_catalog	FGR	novel	2729	13	NA	NA	-9	0	intron_retention	FALSE	canonical	1	63336	junction_11	128139.57203632644	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	196	1089	30.0	-17	True	AGTAAA	-27
PB.5207.8	chr17	-	2498	6	full-splice_match	SLC16A6	ENST00000580666.5	2659	6	160	1	10	-1	multi-exon	FALSE	canonical	1	40422	junction_5	23007.778536834016	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1572	29	1600	10.0	-1	True	AATAAA	-18
PB.8430.39	chr3	-	2927	22	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	-383	combination_of_known_junctions	FALSE	canonical	1	61264	junction_21	438716.67756571475	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2523	405	2927	60.0	-28	True	NA	NA
PB.10070.1	chr6	-	4017	1	incomplete-splice_match	PHIP	ENST00000275034.4	10460	40	138347	6	43054	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-19
PB.322.2	chr1	+	2786	10	full-splice_match	ZMPSTE24	ENST00000372759.3	3108	10	116	206	-13	-206	multi-exon	FALSE	canonical	1	461096	junction_4	55878.78067348603	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	50	1477	80.0	-13	True	CATAAA	-42
PB.5207.1	chr17	-	3843	6	full-splice_match	SLC16A6	ENST00000580666.5	2659	6	-14	-1170	-13	-1	multi-exon	TRUE	canonical	1	40422	junction_5	23007.778536834016	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	203	1774	25.0	685	False	AATAAA	-25
PB.5207.3	chr17	-	3935	7	full-splice_match	SLC16A6	ENST00000327268.8	3807	7	-133	5	17	-5	multi-exon	FALSE	canonical	1	4844	junction_6	43320.73883930575	NA	3	NA	TRUE	NA	NA	NA	C	coding	523	1572	299	1870	30.0	716	False	AATAAA	-21
PB.8803.6	chr4	-	1677	9	incomplete-splice_match	CENPC	ENST00000510189.5	2917	14	-63	19143	40	-498	3prime_fragment	FALSE	canonical	1	12417	junction_7	33944.95743088176	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1464	212	1675	60.0	-4	True	AAGAAA	-12
PB.5207.5	chr17	-	3896	7	novel_not_in_catalog	SLC16A6	novel	3807	7	NA	NA	-11	-7	intron_retention	FALSE	canonical	1	1079	junction_5	45258.45372475241	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	262	1833	30.0	-1	True	AATAAA	-19
PB.9064.4	chr4	+	4209	13	full-splice_match	CLCN3	ENST00000513761.5	6692	13	13	2470	5	658	multi-exon	FALSE	canonical	1	228621	junction_5	82839.93200087576	NA	24	2	TRUE	NA	NA	NA	C	coding	818	2457	547	3003	50.0	-44	True	ATTAAA	-4
PB.11452.1	chr9	-	2918	20	incomplete-splice_match	GLDC	ENST00000639443.1	2727	21	851	-452	-26	0	5prime_fragment	TRUE	canonical	1	5008	junction_15	20433.221271068967	NA	0	NA	TRUE	NA	NA	NA	B	coding	769	2310	61	2370	20.0	-4	True	AATAAA	-15
PB.5207.6	chr17	-	3785	7	novel_in_catalog	SLC16A6	novel	3807	7	NA	NA	-14	-7	intron_retention	FALSE	canonical	1	1136	junction_5	45041.64259388811	NA	3	NA	TRUE	NA	NA	NA	C	coding	523	1572	151	1722	30.0	-4	True	AATAAA	-19
PB.7569.4	chr21	-	2940	7	novel_not_in_catalog	SLC19A1	novel	3572	5	NA	NA	17	3	intron_retention	FALSE	canonical	1	1076	junction_3	90221.19985470278	NA	4	NA	TRUE	NA	NA	NA	C	coding	398	1197	137	1333	15.0	-15	True	ATTAAA	-18
PB.9064.5	chr4	+	4066	14	full-splice_match	CLCN3	ENST00000347613.8	3635	14	8	-439	5	439	multi-exon	FALSE	canonical	1	50478	junction_13	133132.94438467344	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	547	3147	45.0	-44	True	AATAAA	-19
PB.10197.1	chr6	+	1233	5	full-splice_match	TPD52L1	ENST00000368388.6	2147	5	3	911	3	0	multi-exon	FALSE	canonical	1	250364	junction_4	132355.20765821796	NA	1	NA	TRUE	NA	NA	NA	A	coding	131	396	185	580	25.0	-5	True	ATTAAA	-17
PB.561.20	chr1	+	2770	12	full-splice_match	MFSD14A	ENST00000370152.7	2777	12	1	6	1	-6	multi-exon	FALSE	canonical	1	415521	junction_7	112516.85111246433	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	136	1608	40.0	3	True	AATAAA	-28
PB.7569.5	chr21	-	2837	6	full-splice_match	SLC19A1	ENST00000311124.8	3811	6	36	938	36	1	multi-exon	FALSE	canonical	1	50343	junction_4	67930.02084910618	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	118	1893	10.0	4	True	ATTAAA	-16
PB.9912.3	chr6	-	3296	6	novel_not_in_catalog	HLA-DOA	novel	3489	5	NA	NA	0	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58305.089523985815	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	44	796	35.0	-4	True	ATTAAA	-18
PB.8238.6	chr3	-	2731	4	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18571	158451	any annotated donor/acceptor	FALSE	canonical	1	1225	junction_1	1343.0773949735321	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-17	False	AATAAA	-13
PB.8024.4	chr3	+	2561	5	full-splice_match	EXOG	ENST00000422077.6	1317	5	0	-1244	0	-8	multi-exon	FALSE	canonical	1	7511	junction_1	40882.1164164418	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	24	980	85.0	-12	True	NA	NA
PB.9069.2	chr4	+	4181	12	full-splice_match	GALNT7	ENST00000265000.8	4307	12	130	-4	72	4	multi-exon	FALSE	canonical	1	227341	junction_6	66964.01459103808	NA	11	NA	TRUE	NA	NA	NA	C	coding	617	1854	74	1927	10.0	-318	False	AATAAA	-23
PB.880.1	chr1	+	5562	6	novel_not_in_catalog	AL590385.2	novel	553	5	NA	NA	52653	-4858	intron_retention	FALSE	non_canonical	0	0	junction_2	13992.673105593512	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ACTAAA	-5
PB.9064.1	chr4	+	4367	14	full-splice_match	CLCN3	ENST00000347613.8	3635	14	22	-754	-4	754	multi-exon	FALSE	canonical	1	50478	junction_13	133132.94438467344	NA	2	NA	TRUE	NA	NA	NA	C	coding	866	2601	533	3133	45.0	-30	True	AATACA	-9
PB.880.7	chr1	+	5137	2	incomplete-splice_match	AL590385.2	ENST00000537821.2	553	5	86541	-3332	86541	3332	5prime_fragment	FALSE	canonical	1	45635	junction_1	0.0	NA	14	NA	TRUE	NA	NA	NA	B	coding	367	1104	2997	4100	25.0	-6455	False	AATAAA	-16
PB.8602.1	chr3	+	1478	4	full-splice_match	HES1	ENST00000232424.3	1578	4	-54	154	-54	-154	multi-exon	FALSE	canonical	1	810891	junction_1	49611.13248948152	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	291	1133	80.0	-2150	False	NA	NA
PB.11424.1	chr9	-	2679	5	intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2817	junction_1	1532.0554820240682	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	9287	False	NA	NA
PB.11424.2	chr9	-	2725	4	intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	567	junction_3	3640.163579962979	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-2	True	NA	NA
PB.11424.3	chr9	-	2666	3	intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3734	junction_2	2585.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	4	True	NA	NA
PB.880.4	chr1	+	4544	6	novel_not_in_catalog	AL590385.2	novel	553	5	NA	NA	68210	3451	intron_retention	TRUE	non_canonical	0	0	junction_1	18005.219287750984	NA	3	NA	TRUE	NA	NA	NA	B	coding	367	1104	2285	3388	15.0	NA	False	AATAAA	-13
PB.10986.1	chr8	-	2868	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	7	intron_retention	TRUE	non_canonical	0	0	junction_1	1825084.5783487542	NA	4	NA	TRUE	NA	NA	NA	C	coding	339	1020	140	1159	20.0	-28	False	AATAAA	-26
PB.11719.2	chr9	+	1051	3	full-splice_match	GNG10	ENST00000374293.4	1491	3	280	160	280	-160	multi-exon	FALSE	canonical	1	36507	junction_1	35802.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	10	True	ATTAAA	-26
PB.11719.1	chr9	+	1201	3	full-splice_match	GNG10	ENST00000374293.4	1491	3	274	16	274	-16	multi-exon	FALSE	canonical	1	36507	junction_1	35802.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	4	True	AATAAA	-21
PB.8238.7	chr3	-	2844	5	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18573	158450	any annotated donor/acceptor	FALSE	canonical	1	1225	junction_1	2181.1718610645976	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-15	False	AATAAA	-12
PB.2837.11	chr12	+	3046	6	full-splice_match	DRAM1	ENST00000551403.1	920	6	-48	-2078	-40	-3	multi-exon	FALSE	canonical	1	10637	junction_3	106268.59968024421	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	148	492	15.0	21	True	AATAAA	-22
PB.2837.10	chr12	+	3292	8	novel_not_in_catalog	DRAM1	novel	3519	7	NA	NA	3	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	122285.11517693695	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	429	935	15.0	3	True	AATAAA	-19
PB.6928.2	chr2	-	6344	11	full-splice_match	SATB2	ENST00000417098.5	5730	11	-615	1	34	-1	multi-exon	FALSE	canonical	1	42517	junction_10	17042.315848792383	NA	51	2	TRUE	NA	NA	NA	A	coding	733	2202	1433	3634	15.0	-5	True	AATAAA	-18
PB.7842.10	chr22	-	2509	16	full-splice_match	ARFGAP3	ENST00000263245.9	2857	16	140	208	6	-208	multi-exon	FALSE	canonical	1	295464	junction_15	98112.86909708747	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	81	1631	80.0	-29	True	AATAAA	-42
PB.7842.11	chr22	-	2394	15	novel_in_catalog	ARFGAP3	novel	2857	16	NA	NA	-11	-208	combination_of_known_junctions	FALSE	canonical	1	54522	junction_4	143066.79608026968	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	98	1516	80.0	-46	True	AATAAA	-42
PB.10006.3	chr6	-	5250	32	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	19	-90	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	107843.3407745186	NA	2	2	TRUE	NA	NA	NA	B	coding	894	2685	199	2883	30.0	-23	True	NA	NA
PB.11369.2	chr8	+	2614	3	full-splice_match	ZNF696	ENST00000518432.5	545	3	-9	-2060	4	-5	multi-exon	FALSE	canonical	1	5260	junction_1	20402.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	234	1358	30.0	-9	True	AGTAAA	-12
PB.10006.1	chr6	-	4754	28	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121543.5024407128	NA	4	2	TRUE	NA	NA	NA	B	coding	894	2685	199	2883	25.0	-23	True	AGTAAA	-19
PB.10006.7	chr6	-	3260	28	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	19	646	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121543.5024407128	NA	6	2	TRUE	NA	NA	NA	B	coding	894	2685	199	2883	5.0	-23	True	NA	NA
PB.10006.6	chr6	-	4780	32	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	21	-558	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	107843.3407745186	NA	1	1	TRUE	NA	NA	NA	B	coding	894	2685	197	2881	25.0	-21	True	AATACA	-15
PB.10006.4	chr6	-	5281	31	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	31	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	109102.0658905178	NA	0	NA	TRUE	NA	NA	NA	B	coding	1187	3564	187	3750	25.0	-11	True	AGTAAA	-19
PB.10006.9	chr6	-	3391	30	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	4836	631	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	131435.32719793796	NA	1	1	TRUE	NA	NA	NA	B	coding	774	2325	119	2443	5.0	4884	False	NA	NA
PB.10006.8	chr6	-	3760	32	novel_not_in_catalog	XPO5	novel	5364	32	NA	NA	14	555	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	107843.3407745186	NA	1	1	TRUE	NA	NA	NA	B	coding	894	2685	204	2888	30.0	-28	True	AAAACA	-16
PB.8004.12	chr3	-	3485	16	novel_not_in_catalog	UBP1	novel	4148	16	NA	NA	22	-74	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	180850.46401881918	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	53	1567	20.0	21	True	AATAAA	-14
PB.2831.11	chr12	+	5395	12	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-1	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	24752.271929783543	NA	4	NA	TRUE	NA	NA	NA	C	coding	694	2085	332	2416	20.0	-2	True	ATTAAA	-15
PB.2831.10	chr12	+	5187	12	novel_in_catalog	GAS2L3	novel	2218	9	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	892	junction_11	24591.099783498572	NA	3	NA	TRUE	NA	NA	NA	C	coding	694	2085	333	2417	25.0	-3	True	ATTAAA	-12
PB.2831.13	chr12	+	5152	10	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	25318.877054165547	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	113	2197	20.0	20	True	ATTAAA	-14
PB.2831.12	chr12	+	4878	10	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	25318.877054165547	NA	3	1	TRUE	NA	NA	NA	C	coding	694	2085	133	2217	25.0	0	True	ATTAAA	-13
PB.2831.15	chr12	+	5168	10	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	-1448	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	23657.81132452169	NA	3	1	TRUE	NA	NA	NA	C	coding	694	2085	311	2395	25.0	0	True	ATTAAA	-12
PB.2831.14	chr12	+	2423	9	novel_in_catalog	GAS2L3	novel	2218	9	NA	NA	-1461	0	combination_of_known_junctions	FALSE	canonical	1	29987	junction_1	14431.034517663658	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	324	2408	75.0	-13	False	AATAAA	-15
PB.2831.17	chr12	+	2263	9	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	248	0	any annotated donor/acceptor	FALSE	canonical	1	1246	junction_1	22926.748182731346	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	166	2250	75.0	1696	False	AATAAA	-13
PB.2831.16	chr12	+	5116	10	novel_not_in_catalog	GAS2L3	novel	2218	9	NA	NA	158	4	any annotated donor/acceptor	FALSE	canonical	1	892	junction_9	28093.42555751355	NA	2	NA	TRUE	NA	NA	NA	C	coding	694	2085	256	2340	15.0	1606	False	ATTAAA	-18
PB.6952.5	chr2	+	1999	15	full-splice_match	NOP58	ENST00000264279.9	2046	15	45	2	-4	-2	multi-exon	FALSE	canonical	1	828425	junction_2	197209.70427462927	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	182	1771	25.0	-10	True	AATAAA	-22
PB.9138.1	chr5	-	2648	1	full-splice_match	AC091965.2	ENST00000512324.1	613	1	-1051	-984	-1051	984	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6952.7	chr2	+	1869	15	novel_not_in_catalog	NOP58	novel	2046	15	NA	NA	6	-376	any annotated donor/acceptor	FALSE	canonical	1	5975	junction_12	400548.844394686	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	172	1458	20.0	0	True	NA	NA
PB.6952.6	chr2	+	1420	12	incomplete-splice_match	NOP58	ENST00000264279.9	2046	15	47	5787	-2	-27	3prime_fragment	FALSE	canonical	1	828425	junction_2	207661.27272898404	NA	1	1	TRUE	NA	NA	NA	C	coding	413	1239	180	1418	70.0	-8	True	AAGAAA	-28
PB.6952.1	chr2	+	2137	16	novel_in_catalog	NOP58	novel	2046	15	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	44092	junction_3	396372.9236937469	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	514	1914	30.0	-35	True	AATAAA	-17
PB.6952.3	chr2	+	1722	14	incomplete-splice_match	NOP58	ENST00000264279.9	2046	15	43	609	-6	-376	3prime_fragment	FALSE	canonical	1	828425	junction_2	204504.40528971353	NA	1	1	TRUE	NA	NA	NA	C	coding	513	1539	184	1722	20.0	-12	True	NA	NA
PB.6952.2	chr2	+	1583	13	incomplete-splice_match	NOP58	ENST00000264279.9	2046	15	45	3299	-4	2461	3prime_fragment	FALSE	canonical	1	828425	junction_2	210610.01439672214	NA	1	1	TRUE	NA	NA	NA	C	coding	467	1401	182	1582	15.0	-10	True	ATTAAA	-8
PB.230.3	chr1	+	1990	10	full-splice_match	GMEB1	ENST00000294409.2	1912	10	-44	-34	4	21	multi-exon	FALSE	canonical	1	36481	junction_2	42367.38305918776	NA	3	NA	TRUE	NA	NA	NA	C	coding	573	1722	135	1856	20.0	5	True	TTTAAA	-32
PB.10867.1	chr7	+	1321	3	full-splice_match	STMP1	ENST00000507606.2	2450	3	-45	1174	-20	-1174	multi-exon	FALSE	canonical	1	255457	junction_2	149565.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-38	True	NA	NA
PB.10867.2	chr7	+	2472	3	full-splice_match	STMP1	ENST00000507606.2	2450	3	-21	-1	4	1	multi-exon	FALSE	canonical	1	255457	junction_2	149565.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	1753	2139	15.0	-14	True	NA	NA
PB.5653.2	chr19	-	1234	4	incomplete-splice_match	TNFSF14	ENST00000599359.1	1476	5	377	2	-94	-2	5prime_fragment	FALSE	canonical	1	34626	junction_3	9326.670586132128	NA	0	NA	TRUE	NA	NA	NA	B	coding	240	723	143	865	80.0	10000	False	NA	NA
PB.10737.5	chr7	+	2903	20	full-splice_match	SRRT	ENST00000618262.4	2955	20	52	0	-7	0	multi-exon	FALSE	canonical	1	96776	junction_1	393160.89706956927	NA	1	NA	TRUE	NA	NA	NA	C	coding	872	2619	170	2788	10.0	-9825	False	AATAAA	-16
PB.2854.1	chr12	-	2524	1	antisense	novelGene_CHST11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	116	351	1513	1863	60.0	NA	False	NA	NA
PB.8042.5	chr3	+	4088	9	novel_not_in_catalog	TRAK1	novel	5536	17	NA	NA	-24	5	any annotated donor/acceptor	FALSE	canonical	1	148404	junction_7	88964.88665444081	NA	9	NA	TRUE	NA	NA	NA	C	coding	596	1791	262	2052	20.0	8372	False	AATAAA	-23
PB.8473.39	chr3	+	5599	9	novel_not_in_catalog	MBNL1	novel	1039	3	NA	NA	37	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	477755.3895183804	NA	22	1	TRUE	NA	NA	NA	C	coding	375	1128	1058	2185	20.0	-900	False	AATAAA	-38
PB.8473.38	chr3	+	4928	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	150	-2	no_combination_of_known_junctions	FALSE	canonical	1	22145	junction_1	338956.2341305299	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	945	2093	75.0	-787	False	TTTAAA	-7
PB.8042.1	chr3	+	2492	14	incomplete-splice_match	TRAK1	ENST00000327628.9	5293	16	289	15365	289	-2212	3prime_fragment	TRUE	canonical	1	13559	junction_1	98291.97148172029	NA	2	NA	TRUE	NA	NA	NA	C	coding	744	2235	112	2346	100.0	2	True	TTTAAA	-22
PB.8042.3	chr3	+	2376	13	full-splice_match	TRAK1	ENST00000341421.7	4620	13	24	2220	-19	-2212	multi-exon	FALSE	canonical	1	36690	junction_1	96377.28281901493	NA	2	NA	TRUE	NA	NA	NA	C	coding	686	2061	170	2230	100.0	0	True	TTTAAA	-22
PB.8042.2	chr3	+	4864	15	novel_not_in_catalog	TRAK1	novel	5536	17	NA	NA	-10	5	any annotated donor/acceptor	FALSE	canonical	1	36690	junction_1	99927.74219670238	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	204	2828	20.0	-34	False	AATAAA	-23
PB.8473.33	chr3	+	4016	11	full-splice_match	MBNL1	ENST00000282488.11	6458	11	892	1550	12	-974	multi-exon	FALSE	canonical	1	174701	junction_5	331943.2298471532	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	951	2153	70.0	0	True	AATGAA	-7
PB.8473.32	chr3	+	2350	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	11	525	combination_of_known_junctions	FALSE	canonical	1	15693	junction_4	411959.9545013447	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	265	1032	80.0	-1	True	NA	NA
PB.8473.31	chr3	+	4176	7	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	888	junction_1	388930.47846816044	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	242	763	25.0	-2	True	AATAAA	-37
PB.4448.4	chr16	+	3055	1	novel_in_catalog	ARL2BP	novel	2130	6	NA	NA	-2	2170	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-2	True	NA	NA
PB.4448.3	chr16	+	1370	6	full-splice_match	ARL2BP	ENST00000219204.7	2130	6	67	693	67	-333	multi-exon	FALSE	canonical	1	330715	junction_2	92106.55564594737	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	204	695	65.0	1	True	NA	NA
PB.4448.2	chr16	+	1987	6	full-splice_match	ARL2BP	ENST00000219204.7	2130	6	142	1	-19	-1	multi-exon	FALSE	canonical	1	330715	junction_2	92106.55564594737	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	129	620	15.0	-19	True	AGTAAA	-34
PB.4448.1	chr16	+	1638	6	full-splice_match	ARL2BP	ENST00000219204.7	2130	6	28	464	28	-104	multi-exon	FALSE	canonical	1	330715	junction_2	92106.55564594737	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	243	734	15.0	0	True	AATAGA	-17
PB.8473.34	chr3	+	4709	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-14	1	no_combination_of_known_junctions	FALSE	canonical	1	17264	junction_1	353867.2988247148	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	422	1294	25.0	-951	False	AATAAA	-39
PB.8825.4	chr4	+	1606	5	full-splice_match	THAP6	ENST00000311638.7	3549	5	-10	1953	-10	859	multi-exon	FALSE	canonical	1	65512	junction_4	17934.257957886075	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	79	747	80.0	-10	True	NA	NA
PB.6732.19	chr2	-	2039	2	full-splice_match	POLR2D	ENST00000487079.1	1037	2	-28	-974	10	432	multi-exon	FALSE	canonical	1	28788	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	48	380	20.0	-18	True	AATAAA	-15
PB.6732.18	chr2	-	2147	3	novel_in_catalog	POLR2D	novel	5042	4	NA	NA	-1	433	no_combination_of_known_junctions	FALSE	canonical	1	43903	junction_2	33092.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-29	True	AATAAA	-16
PB.467.9	chr1	-	4264	3	novel_in_catalog	GNG12	novel	4404	4	NA	NA	-14	-73	no_combination_of_known_junctions	FALSE	canonical	1	1699	junction_2	353486.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	16	True	ATTAAA	-19
PB.8825.5	chr4	+	2327	3	full-splice_match	THAP6	ENST00000504384.5	1132	3	34	-1229	-1	1229	multi-exon	FALSE	canonical	1	107286	junction_1	1312.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	70	369	35.0	-1	True	NA	NA
PB.6732.15	chr2	-	2309	4	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	15	1304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	135522.9697529783	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	43	375	100.0	-13	True	NA	NA
PB.6732.14	chr2	-	2349	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	15	1304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125063.01465536284	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	43	471	100.0	-13	True	NA	NA
PB.6732.17	chr2	-	2224	4	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-18	433	any annotated donor/acceptor	FALSE	canonical	1	1730	junction_2	51026.324441409655	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	AATAAA	-16
PB.6732.16	chr2	-	2208	4	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-7	1304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45248.62531245194	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	3	True	NA	NA
PB.7808.4	chr22	+	2739	10	full-splice_match	XPNPEP3	ENST00000357137.8	7988	10	-10	5259	-9	51	multi-exon	FALSE	canonical	1	72886	junction_6	7381.150719949924	NA	3	NA	TRUE	NA	NA	NA	C	coding	507	1524	95	1618	80.0	-10	True	TTTAAA	-24
PB.6732.10	chr2	-	3183	4	full-splice_match	POLR2D	ENST00000272645.8	5042	4	15	1844	15	1304	multi-exon	FALSE	canonical	1	110087	junction_1	86276.65554868632	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	43	471	100.0	-13	True	NA	NA
PB.6732.13	chr2	-	2401	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-19	1304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	125063.01465536284	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	39	467	100.0	-9	True	NA	NA
PB.6732.12	chr2	-	2479	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-3	1304	any annotated donor/acceptor	FALSE	canonical	1	265	junction_1	124971.0152695416	NA	2	1	TRUE	NA	NA	NA	C	coding	142	429	23	451	100.0	7	True	NA	NA
PB.10459.9	chr7	+	2895	18	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	-2	122	combination_of_known_junctions	FALSE	canonical	1	15092	junction_17	374439.22363655124	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	133	2352	50.0	-37	True	TATAAA	-27
PB.10459.8	chr7	+	2402	15	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	-4	21	no_combination_of_known_junctions	FALSE	canonical	1	71980	junction_13	400155.9458878603	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	140	2188	40.0	-44	True	AATAAA	-29
PB.7720.16	chr22	-	1505	8	novel_not_in_catalog	PISD	novel	2669	8	NA	NA	10475	89	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	205219.65015135586	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	199	1248	20.0	-5185	False	AATAAA	-23
PB.10459.3	chr7	+	1462	10	incomplete-splice_match	TAX1BP1	ENST00000409980.5	2629	18	20	35732	-7	20610	3prime_fragment	FALSE	canonical	1	1075000	junction_1	204929.41192216758	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1347	116	1462	60.0	-20	True	NA	NA
PB.10459.2	chr7	+	3393	18	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	23	593	combination_of_known_junctions	TRUE	canonical	1	15092	junction_17	374439.22363655124	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	160	2379	10.0	-64	True	ACTAAA	-20
PB.10459.1	chr7	+	2379	14	incomplete-splice_match	TAX1BP1	ENST00000265393.10	2478	17	12	12088	12	-12071	3prime_fragment	TRUE	canonical	1	1075000	junction_1	185475.42949107682	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	171	2180	25.0	-8521	False	AATAAA	-24
PB.10459.7	chr7	+	2387	17	full-splice_match	TAX1BP1	ENST00000265393.10	2478	17	74	17	0	0	multi-exon	FALSE	canonical	1	1075000	junction_1	227355.73423574562	NA	60	3	TRUE	NA	NA	NA	C	coding	747	2244	109	2352	90.0	-13	True	AATATA	-11
PB.10459.6	chr7	+	2800	17	full-splice_match	TAX1BP1	ENST00000396319.6	2892	17	-43	135	-1	106	multi-exon	FALSE	canonical	1	242700	junction_14	342112.0649207791	NA	3	NA	TRUE	NA	NA	NA	C	coding	789	2370	132	2501	40.0	-36	True	AATAAA	-20
PB.10459.5	chr7	+	2910	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	-8	-7	any annotated donor/acceptor	FALSE	canonical	1	22887	junction_14	383921.94040182483	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2340	144	2483	35.0	-48	True	AATAAA	-13
PB.10459.4	chr7	+	3287	17	full-splice_match	TAX1BP1	ENST00000265393.10	2478	17	74	-883	0	-1	multi-exon	FALSE	canonical	1	1075000	junction_1	227355.73423574562	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	109	2352	30.0	-13	True	ATTAAA	-28
PB.8536.1	chr3	+	4201	6	full-splice_match	NDUFB5	ENST00000259037.7	1141	6	91	-3151	2	1	multi-exon	FALSE	canonical	1	1158154	junction_2	225603.70449706717	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	24	593	15.0	-14	True	NA	NA
PB.8536.3	chr3	+	1961	5	novel_in_catalog	NDUFB5	novel	842	4	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1208987	junction_1	194059.6615534769	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-31
PB.8536.2	chr3	+	1051	6	full-splice_match	NDUFB5	ENST00000259037.7	1141	6	92	-2	3	0	multi-exon	FALSE	canonical	1	1158154	junction_2	225603.70449706717	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	23	592	20.0	-13	True	AATAAA	-31
PB.8825.2	chr4	+	3549	5	full-splice_match	THAP6	ENST00000311638.7	3549	5	-2	2	-2	-2	multi-exon	FALSE	canonical	1	65512	junction_4	17934.257957886075	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	71	739	20.0	-2	True	AATAAA	-15
PB.9459.1	chr5	+	1400	4	full-splice_match	CAMLG	ENST00000297156.3	2221	4	14	807	14	-24	multi-exon	FALSE	canonical	1	557083	junction_1	23131.963701049393	NA	2	NA	TRUE	NA	NA	NA	A	coding	296	891	107	997	75.0	2	True	AATGAA	-9
PB.922.3	chr1	+	4023	1	full-splice_match	AL021068.1	ENST00000392097.4	911	1	46	-3158	46	3158	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	55	168	134	301	25.0	-19	True	NA	NA
PB.922.2	chr1	+	3655	1	full-splice_match	AL021068.1	ENST00000392097.4	911	1	42	-2786	42	2786	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	55	168	138	305	20.0	-23	True	AAAAAG	-26
PB.7284.10	chr20	-	2716	2	incomplete-splice_match	TTI1	ENST00000373447.7	3825	8	24	28176	17	625	3prime_fragment	FALSE	canonical	1	144262	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	83	2497	20.0	11	True	NA	NA
PB.11228.7	chr8	-	2643	3	novel_not_in_catalog	TMEM64	novel	4663	2	NA	NA	145	1545	any annotated donor/acceptor	FALSE	canonical	1	6790	junction_2	141244.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	201	518	40.0	360	False	AATAAA	-18
PB.2498.32	chr12	-	2076	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-16	-506	combination_of_known_junctions	FALSE	canonical	1	34343	junction_15	141407.75922410417	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1836	241	2076	70.0	-17	True	NA	NA
PB.5332.1	chr17	-	2509	8	full-splice_match	SIRT7	ENST00000571832.5	2511	8	2	0	2	0	multi-exon	FALSE	canonical	1	142989	junction_6	81509.18682390272	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	20	571	5.0	-3	True	ATTAAA	-16
PB.2498.30	chr12	-	2189	15	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-16	-347	combination_of_known_junctions	FALSE	canonical	1	13259	junction_14	145066.85957736094	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	195	2144	25.0	-17	True	ATTAAA	-17
PB.4398.4	chr16	-	2688	13	novel_not_in_catalog	C16orf58	novel	2783	13	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_3	189292.6016430794	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	27	1178	35.0	-16	True	NA	NA
PB.8467.2	chr3	+	1969	14	full-splice_match	EIF2A	ENST00000460851.5	2198	14	91	138	-1	-11	multi-exon	FALSE	canonical	1	735725	junction_6	295333.47177173395	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	19	1776	35.0	-2	True	ATTAAA	-24
PB.4398.2	chr16	-	2883	12	novel_in_catalog	C16orf58	novel	2783	13	NA	NA	0	-6	intron_retention	FALSE	canonical	1	392491	junction_11	113340.64898269367	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	41	1051	30.0	-30	False	NA	NA
PB.4398.1	chr16	-	2762	13	full-splice_match	C16orf58	ENST00000327237.6	2793	13	22	9	0	0	multi-exon	FALSE	canonical	1	392491	junction_12	112877.17654712134	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	19	1425	40.0	-8	True	NA	NA
PB.8467.1	chr3	+	1618	12	incomplete-splice_match	EIF2A	ENST00000460851.5	2198	14	93	2520	0	-2181	3prime_fragment	FALSE	canonical	1	735725	junction_6	259138.43124480115	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1602	17	1618	70.0	0	True	NA	NA
PB.11228.5	chr8	-	2941	3	full-splice_match	TMEM64	ENST00000458549.6	4997	3	439	1617	-132	1479	multi-exon	FALSE	canonical	1	289278	junction_1	3457.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	322	882	50.0	0	True	AATAAA	-12
PB.10877.1	chr7	+	2624	1	novel_in_catalog	FMC1	novel	345	2	NA	NA	170	-1852	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	1	True	NA	NA
PB.8467.9	chr3	+	5424	13	novel_in_catalog	EIF2A	novel	565	3	NA	NA	-1	14	intron_retention	FALSE	canonical	1	754808	junction_2	286939.41348140995	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	3997	5079	30.0	6	True	AATGAA	-35
PB.8364.6	chr3	-	4228	13	full-splice_match	OSBPL11	ENST00000296220.5	4191	13	-484	447	-484	-447	multi-exon	FALSE	canonical	1	90825	junction_12	46527.201139270845	NA	2	NA	TRUE	NA	NA	NA	C	coding	747	2244	775	3018	25.0	-78	True	ATTAAA	-12
PB.8364.7	chr3	-	4016	13	full-splice_match	OSBPL11	ENST00000296220.5	4191	13	-484	659	-484	-659	multi-exon	FALSE	canonical	1	90825	junction_12	46527.201139270845	NA	3	NA	TRUE	NA	NA	NA	C	coding	747	2244	775	3018	40.0	-78	True	AATAAA	-24
PB.8364.2	chr3	-	4448	13	full-splice_match	OSBPL11	ENST00000296220.5	4191	13	-266	9	-266	-9	multi-exon	FALSE	canonical	1	90825	junction_12	46527.201139270845	NA	3	NA	TRUE	NA	NA	NA	C	coding	747	2244	557	2800	45.0	140	False	AATAAA	-8
PB.8364.3	chr3	-	4760	14	novel_not_in_catalog	OSBPL11	novel	4191	13	NA	NA	-494	-9	any annotated donor/acceptor	FALSE	canonical	1	3558	junction_4	67566.46166649678	NA	4	NA	TRUE	NA	NA	NA	C	coding	619	1860	785	2644	45.0	-88	False	AATAAA	-8
PB.8364.1	chr3	-	5155	13	full-splice_match	OSBPL11	ENST00000296220.5	4191	13	-351	-613	-351	613	multi-exon	TRUE	canonical	1	90825	junction_12	46527.201139270845	NA	3	NA	TRUE	NA	NA	NA	C	coding	747	2244	642	2885	85.0	1	True	NA	NA
PB.2419.42	chr12	-	4881	32	incomplete-splice_match	CHD4	ENST00000644137.1	6499	41	9	11166	3	-522	3prime_fragment	FALSE	canonical	1	448723	junction_29	272831.5149341613	NA	0	NA	TRUE	NA	NA	NA	C	coding	1564	4692	190	4881	60.0	-2	True	GATAAA	-20
PB.8364.9	chr3	-	3536	13	full-splice_match	OSBPL11	ENST00000296220.5	4191	13	-493	1148	-493	-1148	multi-exon	FALSE	canonical	1	90825	junction_12	46527.201139270845	NA	2	NA	TRUE	NA	NA	NA	C	coding	747	2244	784	3027	70.0	-87	False	NA	NA
PB.3454.15	chr14	-	2325	17	novel_not_in_catalog	DLGAP5	novel	2954	20	NA	NA	18	-1518	any annotated donor/acceptor	FALSE	canonical	1	8411	junction_3	116075.29489986163	NA	5	1	TRUE	NA	NA	NA	C	coding	732	2196	130	2325	60.0	-6	True	NA	NA
PB.8524.6	chr3	+	4334	25	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	13538	junction_24	124042.88237837097	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2784	179	2962	25.0	-302	False	AATAAA	-20
PB.3314.8	chr14	+	3625	11	novel_not_in_catalog	MMP14	novel	3732	10	NA	NA	16	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	457887.06469439605	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	227	1975	10.0	7	True	AATAAA	-11
PB.3314.6	chr14	+	3543	10	full-splice_match	MMP14	ENST00000311852.10	3732	10	25	164	6	-164	multi-exon	FALSE	canonical	1	1028355	junction_1	198673.14560023294	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	237	1985	25.0	-3	True	NA	NA
PB.3314.7	chr14	+	2707	11	novel_not_in_catalog	MMP14	novel	3732	10	NA	NA	9	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	457887.06469439605	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	234	1982	5.0	0	True	AATAAA	-13
PB.3314.4	chr14	+	3614	11	novel_not_in_catalog	MMP14	novel	3732	10	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	457887.06469439605	NA	3	NA	TRUE	NA	NA	NA	C	coding	582	1749	257	2005	5.0	-4	True	AATAAA	-16
PB.3314.5	chr14	+	2923	10	full-splice_match	MMP14	ENST00000311852.10	3732	10	16	793	-3	-793	multi-exon	FALSE	canonical	1	1028355	junction_1	198673.14560023294	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	246	1994	55.0	-8750	False	GGGGCT	-43
PB.3314.2	chr14	+	3655	11	novel_not_in_catalog	MMP14	novel	3732	10	NA	NA	0	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	457887.06469439605	NA	14	1	TRUE	NA	NA	NA	C	coding	582	1749	262	2010	5.0	-9	True	AATAAA	-16
PB.3314.3	chr14	+	2349	5	novel_not_in_catalog	MMP14	novel	3732	10	NA	NA	0	-164	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	693715.4386506401	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	105	791	25.0	-6	True	NA	NA
PB.9835.2	chr6	-	2356	2	antisense	novelGene_HLA-K_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	B	coding	128	387	370	756	25.0	NA	False	TATAAA	-35
PB.3314.1	chr14	+	3708	10	full-splice_match	MMP14	ENST00000311852.10	3732	10	24	0	5	0	multi-exon	FALSE	canonical	1	1028355	junction_1	198673.14560023294	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	238	1986	5.0	-4	True	AATAAA	-16
PB.12231.5	chrX	+	2901	20	incomplete-splice_match	DOCK11	ENST00000633080.1	6041	49	82051	-10	-54941	2	5prime_fragment	FALSE	canonical	1	31846	junction_1	50895.24021571132	NA	2	NA	TRUE	NA	NA	NA	C	coding	790	2373	187	2559	60.0	-4152	False	NA	NA
PB.8855.3	chr4	+	1600	10	full-splice_match	COPS4	ENST00000264389.6	1744	10	115	29	-2	0	multi-exon	FALSE	canonical	1	543211	junction_6	39424.784672451104	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	21	1241	45.0	4	True	AATAAA	-15
PB.8855.2	chr4	+	1715	11	full-splice_match	COPS4	ENST00000503682.5	1702	11	-21	8	12	0	multi-exon	FALSE	canonical	1	11093	junction_7	247085.02846582996	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	40	1356	45.0	-15	True	AATAAA	-15
PB.12231.1	chrX	+	6748	53	full-splice_match	DOCK11	ENST00000276202.8	6625	53	-114	-9	-103	-7	multi-exon	TRUE	canonical	1	12405	junction_29	52595.71044432351	NA	0	NA	TRUE	NA	NA	NA	C	coding	2073	6222	178	6399	55.0	-20	False	NA	NA
PB.11579.1	chr9	-	2274	7	novel_not_in_catalog	FRG1JP	novel	931	9	NA	NA	-18	76	intron_retention	FALSE	canonical	1	270	junction_2	4771.630588407093	NA	2	NA	TRUE	NA	NA	NA	A	coding	101	306	719	1024	20.0	-19	True	AATAAA	-26
PB.8544.2	chr3	+	5094	30	full-splice_match	ATP11B	ENST00000323116.9	7325	30	-31	2262	-31	310	multi-exon	TRUE	canonical	1	145463	junction_1	63025.3097420084	NA	0	NA	TRUE	NA	NA	NA	C	coding	1177	3534	292	3825	25.0	-2	True	AATAAA	-20
PB.8544.3	chr3	+	3934	30	novel_in_catalog	ATP11B	novel	7325	30	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	1	8491	junction_29	94400.68240243386	NA	0	NA	TRUE	NA	NA	NA	C	coding	1169	3510	290	3799	30.0	0	True	AATAAA	-22
PB.8853.36	chr4	-	3832	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	6270	junction_6	353084.97781450255	NA	1	1	TRUE	NA	NA	NA	C	coding	1119	3360	61	3420	20.0	-2	True	ATTAAA	-13
PB.8544.1	chr3	+	4472	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	-5	6886	-5	-500	3prime_fragment	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	266	3754	35.0	-9	True	TTTAAA	-5
PB.8544.6	chr3	+	4186	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	78	7089	75	443	3prime_fragment	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	4	NA	TRUE	NA	NA	NA	C	coding	1162	3489	183	3671	15.0	0	True	AATGAA	-18
PB.3539.12	chr14	+	6459	18	novel_in_catalog	RBM25	novel	6910	19	NA	NA	9	-1	intron_retention	FALSE	canonical	1	547333	junction_4	302618.6507015996	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	5189	6136	30.0	-8	True	ATTAAA	-15
PB.3539.11	chr14	+	3496	19	novel_in_catalog	RBM25	novel	6910	19	NA	NA	4	-5	intron_retention	FALSE	canonical	1	18204	junction_7	419131.1969458223	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	889	2394	35.0	-42	False	ATTAAA	-11
PB.3539.10	chr14	+	4941	19	full-splice_match	RBM25	ENST00000261973.11	6910	19	111	1858	0	727	multi-exon	FALSE	canonical	1	547333	junction_4	307355.77691253205	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	175	2706	25.0	13	True	AGTAAA	-16
PB.4014.4	chr15	+	4033	22	full-splice_match	IREB2	ENST00000258886.12	6354	22	24	2297	-15	950	multi-exon	FALSE	canonical	1	204058	junction_7	69458.73372072204	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	126	3017	25.0	-3	True	ATTAAA	-26
PB.4014.5	chr15	+	6324	22	full-splice_match	IREB2	ENST00000258886.12	6354	22	27	3	-12	-3	multi-exon	FALSE	canonical	1	204058	junction_7	69458.73372072204	NA	3	NA	TRUE	NA	NA	NA	C	coding	963	2892	123	3014	5.0	0	True	AATAAA	-19
PB.4014.6	chr15	+	6192	22	novel_not_in_catalog	IREB2	novel	558	4	NA	NA	11	-4	any annotated donor/acceptor	FALSE	canonical	1	6184	junction_15	90476.30359451575	NA	2	NA	TRUE	NA	NA	NA	C	coding	927	2784	100	2883	10.0	23	True	AATAAA	-18
PB.4014.7	chr15	+	2562	15	incomplete-splice_match	IREB2	ENST00000258886.12	6354	22	61	12597	22	103	intron_retention	FALSE	canonical	1	204058	junction_7	58584.03548592677	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	89	2107	40.0	34	True	AATAAA	-8
PB.4014.1	chr15	+	3375	22	full-splice_match	IREB2	ENST00000258886.12	6354	22	-13	2992	0	255	multi-exon	FALSE	canonical	1	204058	junction_7	69458.73372072204	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	163	3054	25.0	-249	False	AATAAA	-31
PB.4014.2	chr15	+	5428	22	full-splice_match	IREB2	ENST00000258886.12	6354	22	8	918	8	-918	multi-exon	FALSE	canonical	1	204058	junction_7	69458.73372072204	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	142	3033	95.0	-228	False	NA	NA
PB.4014.3	chr15	+	2195	16	incomplete-splice_match	IREB2	ENST00000258886.12	6354	22	14	12701	14	-1	3prime_fragment	FALSE	canonical	1	204058	junction_7	65763.27973417654	NA	1	1	TRUE	NA	NA	NA	C	coding	686	2058	136	2193	70.0	-13	True	TTTAAA	-6
PB.9829.1	chr6	+	3023	5	novel_not_in_catalog	HCG15	novel	1032	3	NA	NA	-528	3040	any annotated donor/acceptor	FALSE	canonical	1	5524	junction_1	4633.721857211544	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-19	True	NA	NA
PB.854.20	chr1	-	2540	8	full-splice_match	SLAMF6	ENST00000368059.7	2743	8	0	203	0	-178	multi-exon	FALSE	canonical	1	38209	junction_3	39334.23420235501	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	71	1066	70.0	-11	True	NA	NA
PB.565.3	chr1	-	3807	11	full-splice_match	DBT	ENST00000370132.8	10799	11	-3	6995	-3	-6995	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	18	1466	25.0	-4	True	NA	NA
PB.8250.4	chr3	+	3317	8	full-splice_match	ARL6	ENST00000463745.5	4231	8	224	690	-15	-555	multi-exon	FALSE	canonical	1	50229	junction_4	14941.706609626735	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	254	814	15.0	-33	True	TATAAA	-21
PB.8250.2	chr3	+	3827	7	novel_in_catalog	ARL6	novel	1630	9	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	6440	junction_6	29393.97774299279	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	266	745	25.0	-45	True	ATTAAA	-15
PB.8250.3	chr3	+	3445	8	full-splice_match	ARL6	ENST00000463745.5	4231	8	223	563	-16	-428	multi-exon	FALSE	canonical	1	50229	junction_4	14941.706609626735	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	255	815	25.0	-34	True	CATAAA	-21
PB.8250.1	chr3	+	3877	8	full-splice_match	ARL6	ENST00000463745.5	4231	8	224	130	-15	3	multi-exon	FALSE	canonical	1	50229	junction_4	14941.706609626735	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	254	814	15.0	-33	True	ATTAAA	-21
PB.9637.1	chr5	+	3199	7	incomplete-splice_match	TSPAN17	ENST00000508164.5	2457	9	-100	-3	15	0	intron_retention	FALSE	canonical	1	240671	junction_1	54576.556263503226	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	215	1105	10.0	0	True	AATAAA	-18
PB.475.1	chr1	-	3069	3	incomplete-splice_match	LRRIQ3	ENST00000415760.5	4524	10	11	153982	11	0	3prime_fragment	FALSE	canonical	1	18735	junction_1	2701.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	200	603	182	784	80.0	-1	True	GATAAA	-28
PB.7057.21	chr2	+	2517	24	novel_in_catalog	SP100	novel	3882	25	NA	NA	-19	-970	combination_of_known_junctions	FALSE	canonical	1	40055	junction_1	288837.1890010731	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2421	96	2516	75.0	-18	True	AAAAAG	-17
PB.7057.20	chr2	+	4508	12	novel_in_catalog	SP100	novel	3882	25	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	431024	junction_1	114627.22342387853	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	96	707	20.0	-18	True	AATAAA	-16
PB.4644.10	chr17	-	5480	24	novel_not_in_catalog	ABR	novel	5289	23	NA	NA	-103	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	194675.50493680697	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	615	2924	15.0	-1	True	AATAAA	-29
PB.1349.16	chr10	-	2666	14	incomplete-splice_match	SVIL	ENST00000355867.8	7586	38	112261	22102	-143	4526	internal_fragment	FALSE	canonical	1	53518	junction_11	105816.42849245765	NA	2	NA	TRUE	NA	NA	NA	C	coding	746	2241	55	2295	30.0	-3	True	ATTAAA	-16
PB.1349.17	chr10	-	3820	1	novel_in_catalog	SVIL	novel	6729	36	NA	NA	352	-73763	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	125	378	771	1148	25.0	1593	False	AATAAA	-21
PB.1349.10	chr10	-	4240	22	novel_in_catalog	SVIL	novel	6729	36	NA	NA	-141	-88	no_combination_of_known_junctions	FALSE	canonical	1	2510	junction_21	136102.6712703008	NA	2	NA	TRUE	NA	NA	NA	C	coding	1033	3102	328	3429	35.0	-1	True	AATAAA	-15
PB.4644.14	chr17	-	5451	23	novel_not_in_catalog	ABR	novel	5289	23	NA	NA	-106	0	any annotated donor/acceptor	FALSE	canonical	1	76	junction_1	183691.40342822185	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	254	2968	25.0	-4	True	AATAAA	-26
PB.4976.5	chr17	-	2195	8	novel_in_catalog	P3H4	novel	2791	9	NA	NA	248	25	intron_retention	FALSE	canonical	1	24311	junction_5	121313.75109666199	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	37	1533	85.0	-8	True	NA	NA
PB.8841.3	chr4	-	4174	12	novel_in_catalog	CNOT6L	novel	8843	12	NA	NA	-46	-32	combination_of_known_junctions	FALSE	canonical	1	10491	junction_3	52689.89254132645	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	129	1796	75.0	2456	False	AATAAA	-30
PB.4976.7	chr17	-	1861	8	full-splice_match	P3H4	ENST00000393928.5	2601	8	248	492	248	-126	multi-exon	FALSE	canonical	1	181630	junction_7	68327.62219734312	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	37	1350	65.0	-8	True	NA	NA
PB.4976.6	chr17	-	1670	9	novel_not_in_catalog	P3H4	novel	2791	9	NA	NA	259	25	intron_retention	FALSE	non_canonical	0	0	junction_8	122168.49139098838	NA	3	NA	TRUE	NA	NA	NA	C	coding	250	753	256	1008	85.0	3	True	NA	NA
PB.1349.18	chr10	-	2536	1	novel_in_catalog	SVIL	novel	6729	36	NA	NA	397	-75002	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	125	378	726	1103	90.0	1638	False	TTTAAA	-35
PB.4976.3	chr17	-	2034	8	full-splice_match	P3H4	ENST00000393928.5	2601	8	226	341	226	25	multi-exon	FALSE	canonical	1	181630	junction_7	68327.62219734312	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	59	1372	85.0	-30	True	NA	NA
PB.8841.5	chr4	-	3305	12	full-splice_match	CNOT6L	ENST00000649644.1	8843	12	-10	5548	-2	-914	multi-exon	FALSE	canonical	1	10491	junction_3	53076.19672315492	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	157	1809	50.0	-11	True	AATAAA	-20
PB.807.7	chr1	-	2688	11	full-splice_match	YY1AP1	ENST00000355499.8	2663	11	-27	2	15	-2	multi-exon	FALSE	canonical	1	11591	junction_1	247817.2110661606	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	227	2479	20.0	40	True	NA	NA
PB.11799.1	chr9	+	5287	5	full-splice_match	ZNF79	ENST00000612342.4	2192	5	6	-3101	-2	3100	multi-exon	FALSE	canonical	1	25043	junction_1	18860.588206628126	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	588	2012	20.0	-60	True	TTTAAA	-16
PB.5586.6	chr19	-	5022	32	novel_in_catalog	AP3D1	novel	4870	30	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	144074	junction_9	254992.8586055038	NA	1	NA	TRUE	NA	NA	NA	C	coding	1203	3612	233	3844	15.0	-16	True	AATAAA	-15
PB.11456.10	chr9	+	1841	5	incomplete-splice_match	TYRP1	ENST00000388918.9	2851	8	4987	202	-84	-202	5prime_fragment	FALSE	canonical	1	394651	junction_1	40375.09408270772	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	33	935	10.0	-9596	False	AGTAAA	-14
PB.11883.4	chr9	-	2279	8	novel_not_in_catalog	REXO4	novel	1899	6	NA	NA	25	-2	any annotated donor/acceptor	FALSE	canonical	1	3728	junction_7	145401.0861619033	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	176	1390	20.0	-10	True	AATAAA	-18
PB.9445.8	chr5	-	8455	21	full-splice_match	AFF4	ENST00000265343.9	9552	21	7	1090	7	-1090	multi-exon	FALSE	canonical	1	229244	junction_20	56859.44758918697	NA	1	NA	TRUE	NA	NA	NA	C	coding	1163	3492	374	3865	35.0	6	True	AATAAA	-16
PB.2173.2	chr11	+	1536	8	full-splice_match	DGAT2	ENST00000228027.11	2453	8	18	899	17	3	multi-exon	FALSE	canonical	1	459261	junction_1	176404.46563242446	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	243	1409	25.0	-7	True	AAGAAA	-25
PB.2173.1	chr11	+	2461	8	full-splice_match	DGAT2	ENST00000228027.11	2453	8	-7	-1	-7	0	multi-exon	FALSE	canonical	1	459261	junction_1	176404.46563242446	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	268	1434	15.0	-5	True	AATAAA	-19
PB.8596.1	chr3	+	3322	8	novel_not_in_catalog	CLDN16	novel	578	5	NA	NA	-32179	-1	any annotated donor/acceptor	FALSE	canonical	1	1061	junction_1	4311.082822452014	NA	1	NA	TRUE	NA	NA	NA	A	coding	235	708	509	1216	30.0	-11	True	ATTAAA	-20
PB.1219.26	chr1	-	8596	31	incomplete-splice_match	LYST	ENST00000389793.6	13480	53	14	80304	14	-3355	3prime_fragment	FALSE	canonical	1	78139	junction_20	29027.72410231295	NA	1	NA	TRUE	NA	NA	NA	C	coding	2804	8415	162	8576	35.0	-4	True	AATAAA	-16
PB.1674.19	chr10	-	2864	12	novel_not_in_catalog	EIF3A	novel	6646	22	NA	NA	-44813	2	intron_retention	FALSE	canonical	0	0	junction_11	714206.4391333251	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	475	2616	85.0	NA	False	NA	NA
PB.10947.10	chr7	+	2507	1	novel_in_catalog	RBM33	novel	1404	6	NA	NA	-17	-54015	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1	True	NA	NA
PB.1219.29	chr1	-	5048	12	full-splice_match	LYST	ENST00000465349.5	5220	12	-23	195	-23	-195	multi-exon	FALSE	canonical	1	9706	junction_11	45932.41597631772	NA	0	NA	TRUE	NA	NA	NA	C	coding	1491	4473	575	5047	70.0	49	True	NA	NA
PB.1674.14	chr10	-	4571	22	full-splice_match	EIF3A	ENST00000369144.7	6646	22	-46	2121	-27	2	multi-exon	FALSE	canonical	1	780023	junction_21	513062.870659706	NA	5	NA	TRUE	NA	NA	NA	C	coding	1382	4149	175	4323	85.0	420	False	NA	NA
PB.7057.28	chr2	+	2134	23	full-splice_match	SP100	ENST00000409112.5	2198	23	-61	125	-16	-125	multi-exon	FALSE	canonical	1	98698	junction_15	253718.6979036051	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2040	93	2132	55.0	-15	True	NA	NA
PB.2050.1	chr11	+	1974	2	full-splice_match	TIGD3	ENST00000309880.5	2012	2	34	4	34	-4	multi-exon	FALSE	canonical	1	7557	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	471	1416	174	1589	35.0	50	False	AATAAA	-13
PB.11327.5	chr8	-	4508	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	-26	2262	-26	-2262	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	219	1286	65.0	-27	False	NA	NA
PB.10639.1	chr7	-	5063	19	novel_in_catalog	SEMA3C	novel	5174	18	NA	NA	29	-1	combination_of_known_junctions	FALSE	canonical	1	20456	junction_16	148427.32036572855	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2082	627	2708	20.0	-5	True	AATAAA	-17
PB.11777.10	chr9	+	2898	23	incomplete-splice_match	RABGAP1	ENST00000373647.8	4997	26	17	6104	6	1009	3prime_fragment	FALSE	canonical	1	51684	junction_1	86298.72016513626	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2781	118	2898	55.0	6	True	AAGAAA	-39
PB.1030.1	chr1	-	2612	1	incomplete-splice_match	KIF21B	ENST00000332129.6	9897	34	51697	2	33587	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	123	372	136	507	15.0	4771	False	AATAAA	-13
PB.10639.9	chr7	-	1936	14	incomplete-splice_match	SEMA3C	ENST00000265361.7	5174	18	230	18959	61	-16629	3prime_fragment	FALSE	canonical	1	316863	junction_10	84869.03214912371	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	333	1889	45.0	5	True	AATAAA	-12
PB.10639.8	chr7	-	3437	18	full-splice_match	SEMA3C	ENST00000265361.7	5174	18	220	1517	51	813	multi-exon	FALSE	canonical	1	316863	junction_14	80751.44721905806	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	343	2598	70.0	-5	True	NA	NA
PB.2646.1	chr12	+	1898	1	antisense	novelGene_CBX5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1693.6	chr10	-	2983	5	incomplete-splice_match	C10orf88	ENST00000481909.1	2482	6	188	4354	96	-3259	3prime_fragment	FALSE	canonical	1	91164	junction_2	11384.616682172484	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	38	1144	60.0	-1	True	TATAAA	-21
PB.9445.6	chr5	-	9597	22	novel_not_in_catalog	AFF4	novel	9552	21	NA	NA	9	-22	any annotated donor/acceptor	FALSE	canonical	1	21674	junction_21	102456.55275268498	NA	19	1	TRUE	NA	NA	NA	C	coding	1163	3492	448	3939	40.0	-5	True	AATAAA	-20
PB.469.5	chr1	-	4311	11	full-splice_match	DEPDC1	ENST00000370966.9	4586	11	139	136	0	-136	multi-exon	FALSE	canonical	1	16198	junction_6	40816.73155324909	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	84	1667	30.0	-1	True	NA	NA
PB.469.4	chr1	-	5321	12	full-splice_match	DEPDC1	ENST00000456315.6	5331	12	8	2	8	-2	multi-exon	FALSE	canonical	1	16198	junction_7	38525.65264258595	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	108	2543	10.0	-1	True	ATTAAA	-15
PB.469.7	chr1	-	3320	11	full-splice_match	DEPDC1	ENST00000370966.9	4586	11	96	1170	-11	252	multi-exon	FALSE	canonical	1	16198	junction_6	40816.73155324909	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	127	1710	30.0	-1	True	ATTAAA	-21
PB.1693.7	chr10	-	2493	5	incomplete-splice_match	C10orf88	ENST00000481909.1	2482	6	185	4847	93	-3752	3prime_fragment	FALSE	canonical	1	91164	junction_2	11384.616682172484	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	41	1147	65.0	-4	True	NA	NA
PB.469.9	chr1	-	4122	12	full-splice_match	DEPDC1	ENST00000456315.6	5331	12	33	1176	1	246	multi-exon	FALSE	canonical	1	16198	junction_7	38525.65264258595	NA	2	NA	TRUE	NA	NA	NA	C	coding	811	2436	83	2518	35.0	0	True	ATTAAA	-15
PB.469.8	chr1	-	2990	10	novel_in_catalog	DEPDC1	novel	5331	12	NA	NA	18	249	intron_retention	FALSE	canonical	1	13416	junction_9	43414.791488900315	NA	1	1	TRUE	NA	NA	NA	C	coding	303	912	472	1383	35.0	17	True	ATTAAA	-18
PB.1693.4	chr10	-	2177	6	novel_in_catalog	C10orf88	novel	2991	6	NA	NA	94	-15	combination_of_known_junctions	FALSE	canonical	1	3031	junction_5	51767.083823603585	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	512	1273	20.0	-3	True	AATAAA	-3
PB.8435.13	chr3	+	4188	5	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	-11	83	combination_of_known_junctions	FALSE	canonical	1	17194	junction_1	76319.12501914248	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	494	4081	75.0	-12	True	NA	NA
PB.1693.5	chr10	-	4786	5	incomplete-splice_match	C10orf88	ENST00000481909.1	2482	6	186	2553	94	-1458	3prime_fragment	FALSE	canonical	1	91164	junction_2	11384.616682172484	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	40	1146	30.0	-3	True	NA	NA
PB.11844.5	chr9	-	2328	6	full-splice_match	ASB6	ENST00000277458.4	2330	6	-1	3	-1	-3	multi-exon	FALSE	canonical	1	160058	junction_5	47785.94426146668	NA	4	NA	TRUE	NA	NA	NA	C	coding	421	1266	168	1433	45.0	-28	True	ATTAAA	-17
PB.8130.11	chr3	+	2897	16	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	90943	junction_8	64632.16499009349	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	74	1510	10.0	-3	True	AATAAA	-43
PB.8958.4	chr4	-	1384	5	full-splice_match	MAD2L1	ENST00000296509.10	5468	5	254	3830	1	-1	multi-exon	FALSE	canonical	1	44789	junction_3	101841.53014948027	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	87	704	40.0	-32	True	AATAAA	-14
PB.3394.6	chr14	-	3770	20	novel_not_in_catalog	SEC23A	novel	3813	2	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3756	junction_7	168720.85753202977	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	205	1740	20.0	20	True	AATAAA	-18
PB.3394.7	chr14	-	3754	19	novel_in_catalog	SEC23A	novel	3813	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	1837	junction_3	168941.16096269386	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	224	2434	20.0	1	True	AATAAA	-18
PB.3394.4	chr14	-	4217	21	novel_not_in_catalog	SEC23A	novel	3813	2	NA	NA	-1	0	intron_retention	FALSE	canonical	1	157	junction_6	214814.5169092338	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	225	1964	20.0	0	True	AATAAA	-18
PB.3394.5	chr14	-	3915	21	novel_not_in_catalog	SEC23A	novel	3813	2	NA	NA	0	0	intron_retention	TRUE	canonical	1	9943	junction_6	212111.09350668106	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	226	2595	20.0	-1	True	AATAAA	-18
PB.3394.2	chr14	-	3932	21	novel_not_in_catalog	SEC23A	novel	3813	2	NA	NA	32	1	any annotated donor/acceptor	FALSE	canonical	1	3091	junction_1	210925.67660279654	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	171	2417	20.0	54	True	AATAAA	-19
PB.3394.3	chr14	-	3841	20	novel_not_in_catalog	SEC23A	novel	3813	2	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	168645.65350442188	NA	181	14	TRUE	NA	NA	NA	C	coding	728	2187	223	2409	20.0	2	True	AATAAA	-18
PB.8090.2	chr3	+	2588	13	full-splice_match	ATRIP	ENST00000320211.9	4580	13	3	1989	-1	1	multi-exon	FALSE	canonical	1	60997	junction_1	25547.642670117337	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	111	2486	5.0	-1	True	ATTAAA	-35
PB.8090.3	chr3	+	2430	7	novel_in_catalog	ATRIP	novel	711	6	NA	NA	0	1343	intron_retention	FALSE	canonical	1	11162	junction_6	37875.0657278491	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	1048	1731	15.0	0	True	AATATA	-21
PB.9166.21	chr5	-	4421	20	full-splice_match	ZFR	ENST00000265069.12	4738	20	22	295	-1	-16	multi-exon	FALSE	canonical	1	314024	junction_18	154466.51958428402	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	82	3306	65.0	0	True	GATAAA	-12
PB.9166.22	chr5	-	4077	20	full-splice_match	ZFR	ENST00000265069.12	4738	20	23	638	0	-136	multi-exon	FALSE	canonical	1	314024	junction_18	154466.51958428402	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	81	3305	40.0	1	True	AATAAA	-28
PB.1693.1	chr10	-	2914	6	full-splice_match	C10orf88	ENST00000481909.1	2482	6	176	-608	84	3	multi-exon	FALSE	canonical	1	91164	junction_3	10964.782708289298	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	50	1387	10.0	-13	True	NA	NA
PB.9166.24	chr5	-	3497	20	full-splice_match	ZFR	ENST00000265069.12	4738	20	14	1227	-9	71	multi-exon	FALSE	canonical	1	314024	junction_18	154466.51958428402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	90	3314	55.0	-8	True	ATTAAA	-42
PB.9166.25	chr5	-	3249	20	full-splice_match	ZFR	ENST00000265069.12	4738	20	46	1443	23	-145	multi-exon	FALSE	canonical	1	314024	junction_18	154466.51958428402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3192	58	3249	75.0	24	False	NA	NA
PB.3394.8	chr14	-	3620	19	novel_in_catalog	SEC23A	novel	3813	2	NA	NA	-6	0	intron_retention	FALSE	canonical	1	99	junction_15	172958.76009206165	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	240	2300	20.0	-15	False	AATAAA	-18
PB.9166.27	chr5	-	1967	11	incomplete-splice_match	ZFR	ENST00000265069.12	4738	20	30	40894	7	11483	3prime_fragment	FALSE	canonical	1	314024	junction_9	124198.80606547714	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1893	74	1966	60.0	8	True	AGTAAA	-27
PB.4024.4	chr15	+	1461	14	full-splice_match	FAH	ENST00000561421.5	1549	14	102	-14	102	3	multi-exon	FALSE	canonical	1	343998	junction_7	60498.54451503664	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	57	1316	20.0	-15	True	AATAAA	-37
PB.11799.6	chr9	+	3107	5	novel_not_in_catalog	ZNF79	novel	2192	5	NA	NA	11	914	any annotated donor/acceptor	FALSE	canonical	1	49	junction_1	28434.968933515647	NA	11	1	TRUE	NA	NA	NA	C	coding	474	1425	594	2018	5.0	-47	True	NA	NA
PB.7495.15	chr21	+	3234	10	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	-29	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	125498.51989899922	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	313	1860	20.0	-8	True	AAAAAG	-26
PB.4024.1	chr15	+	1559	15	full-splice_match	FAH	ENST00000407106.5	2152	15	1	592	1	3	multi-exon	FALSE	canonical	1	86559	junction_1	116279.9866083487	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	155	1414	20.0	-8	True	AATAAA	-37
PB.8130.15	chr3	+	2764	17	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	1	1403	junction_8	89365.90625552395	NA	2	NA	TRUE	NA	NA	NA	C	coding	753	2262	43	2304	10.0	28	True	AATAAA	-41
PB.4024.3	chr15	+	1710	15	full-splice_match	FAH	ENST00000407106.5	2152	15	67	375	-8	220	multi-exon	FALSE	canonical	1	86559	junction_1	116279.9866083487	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	89	1348	45.0	-7367	False	NA	NA
PB.4024.2	chr15	+	2013	6	incomplete-splice_match	FAH	ENST00000407106.5	2152	15	9	23198	0	41	3prime_fragment	FALSE	canonical	1	86559	junction_1	170534.74767284232	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	147	629	25.0	0	True	NA	NA
PB.702.17	chr1	-	2183	1	genic	NBPF9	novel	NA	NA	NA	NA	-4	-41620	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.702.16	chr1	-	2567	5	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-9	-33205	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	105	318	1160	1477	5.0	NA	False	NA	NA
PB.1459.4	chr10	-	2124	10	novel_in_catalog	ASCC1	novel	2683	10	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	54383	junction_9	86445.30974631188	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	240	1313	15.0	1146	False	ATTAAA	-14
PB.8130.14	chr3	+	2734	15	novel_in_catalog	SEMA3B	novel	934	7	NA	NA	4	-2	intron_retention	FALSE	canonical	1	20419	junction_12	93232.1490296876	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	69	1505	10.0	2	True	AATAAA	-43
PB.1459.2	chr10	-	2139	11	novel_in_catalog	ASCC1	novel	2683	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	4793	junction_1	120672.04614822772	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	135	1217	10.0	-32	True	ATTAAA	-16
PB.1459.3	chr10	-	2025	10	full-splice_match	ASCC1	ENST00000317168.10	2002	10	-23	0	0	0	multi-exon	FALSE	canonical	1	216703	junction_9	43262.239296962594	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	139	1212	10.0	-36	True	ATTAAA	-16
PB.1459.1	chr10	-	2618	11	novel_in_catalog	ASCC1	novel	2683	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	4793	junction_1	120672.04614822772	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	125	1207	25.0	-22	True	AATAAA	-14
PB.9190.2	chr5	+	5425	18	novel_in_catalog	OSMR	novel	1740	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	52933	junction_1	57736.65553601481	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	289	3228	10.0	-226	False	AATAAA	-26
PB.628.2	chr1	-	4917	8	incomplete-splice_match	AP4B1	ENST00000369569.5	2818	10	87	308	-67	0	intron_retention	FALSE	canonical	1	195382	junction_2	22423.001250083016	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	3028	4908	25.0	155	False	AATAAA	-17
PB.9599.4	chr5	-	2896	3	full-splice_match	PWWP2A	ENST00000523662.1	1819	3	-13	-1064	-12	975	multi-exon	FALSE	canonical	1	35177	junction_1	27707.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	48	1610	60.0	14	True	TTTAAA	-34
PB.9190.1	chr5	+	5700	18	full-splice_match	OSMR	ENST00000274276.7	5539	18	-178	17	-37	-17	multi-exon	FALSE	canonical	1	82471	junction_1	51647.72135565938	NA	0	NA	TRUE	NA	NA	NA	C	coding	979	2940	581	3520	45.0	-257	False	AATAAA	-9
PB.1576.1	chr10	-	2344	5	full-splice_match	MORN4	ENST00000307450.10	2315	5	-28	-1	-8	1	multi-exon	FALSE	canonical	1	71613	junction_3	12057.488697382221	NA	0	NA	TRUE	NA	NA	NA	A	coding	146	441	193	633	15.0	-9	True	AATAAA	-22
PB.8777.10	chr4	-	2623	9	full-splice_match	USP46	ENST00000441222.7	7954	9	41	5290	4	552	multi-exon	FALSE	canonical	1	122858	junction_1	23557.453926185975	NA	4	1	TRUE	NA	NA	NA	C	coding	366	1101	145	1245	20.0	-2	True	AATAAA	-12
PB.8006.8	chr3	+	5504	17	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	9	537	intron_retention	FALSE	canonical	1	21513	junction_11	330713.4689058406	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	3075	5024	15.0	-50	True	AATAAA	-13
PB.2634.1	chr12	+	3592	5	incomplete-splice_match	SP1	ENST00000327443.8	2846	6	614	0	169	0	5prime_fragment	FALSE	canonical	1	282126	junction_1	43142.09864216158	NA	2	NA	TRUE	NA	NA	NA	B	coding	778	2337	866	3202	60.0	-2	True	GATAAA	-27
PB.628.7	chr1	-	2090	8	novel_in_catalog	AP4B1	novel	2144	7	NA	NA	-47	-1	no_combination_of_known_junctions	TRUE	canonical	1	6982	junction_2	78691.49286282217	NA	4	NA	TRUE	NA	NA	NA	C	coding	635	1908	175	2082	20.0	-93	True	AATAAA	-16
PB.3931.3	chr15	-	2694	6	novel_not_in_catalog	PARP16	novel	678	4	NA	NA	-27	1	any annotated donor/acceptor	FALSE	canonical	1	7592	junction_4	42906.52849159438	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	474	1385	15.0	-28	True	AATAAA	-22
PB.3931.2	chr15	-	2737	6	full-splice_match	PARP16	ENST00000649807.1	2343	6	-393	-1	-13	1	multi-exon	FALSE	canonical	1	75766	junction_5	21228.421077414117	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	460	1428	15.0	-14	True	AATAAA	-22
PB.10938.2	chr7	-	1128	8	full-splice_match	RHEB	ENST00000262187.9	2075	8	249	698	176	164	multi-exon	FALSE	canonical	1	1353	junction_4	94183.66421118313	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	165	719	15.0	420	False	AATAAA	-16
PB.3931.1	chr15	-	1829	8	novel_in_catalog	PARP16	novel	678	4	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	6074	junction_1	45651.66249023631	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	446	1372	20.0	0	True	AATAAA	-36
PB.7021.5	chr2	+	3605	9	full-splice_match	RETREG2	ENST00000430297.6	4618	9	38	975	-22	704	multi-exon	FALSE	canonical	1	585963	junction_3	158856.8889413027	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	150	1730	35.0	0	True	NA	NA
PB.7021.4	chr2	+	2573	10	novel_not_in_catalog	RETREG2	novel	992	9	NA	NA	1	-78	intron_retention	FALSE	canonical	0	0	junction_1	295554.12636321114	NA	3	NA	TRUE	NA	NA	NA	C	coding	336	1011	470	1480	20.0	-27	True	AATAAA	-14
PB.11791.18	chr9	-	2300	12	full-splice_match	MAPKAP1	ENST00000265960.7	3395	12	18	1077	-4	-2	multi-exon	FALSE	canonical	1	542994	junction_5	162846.32319033664	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	316	1884	20.0	-9	True	AATAAA	-17
PB.9481.9	chr5	+	3662	17	novel_in_catalog	CTNNA1	novel	696	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	7791	junction_9	500269.5286329254	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	91	2718	35.0	-2	True	AATAAA	-21
PB.7495.18	chr21	+	1680	1	novel_in_catalog	IFNAR2	novel	1389	9	NA	NA	-20	-15223	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	ATTAAA	-39
PB.7021.3	chr2	+	4598	9	full-splice_match	RETREG2	ENST00000430297.6	4618	9	10	10	0	-10	multi-exon	FALSE	canonical	1	585963	junction_3	158856.8889413027	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	178	1758	55.0	-28	True	NA	NA
PB.7021.2	chr2	+	2542	9	full-splice_match	RETREG2	ENST00000430297.6	4618	9	87	1989	27	-2	multi-exon	FALSE	canonical	1	585963	junction_3	158856.8889413027	NA	3	NA	TRUE	NA	NA	NA	C	coding	526	1581	101	1681	15.0	-4078	False	AATAAA	-16
PB.9481.5	chr5	+	5402	17	novel_in_catalog	CTNNA1	novel	696	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	840118	junction_11	356443.52323732834	NA	2	NA	TRUE	NA	NA	NA	C	coding	791	2376	96	2471	35.0	-7	True	AATAAA	-21
PB.1702.14	chr10	-	1480	7	full-splice_match	EEF1AKMT2	ENST00000368836.6	1462	7	-20	2	-20	-2	multi-exon	FALSE	canonical	1	106578	junction_2	52886.113422302704	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	58	933	10.0	-17	True	AATATA	-12
PB.9481.7	chr5	+	3351	18	novel_not_in_catalog	CTNNA1	novel	696	6	NA	NA	0	-121	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	494192.2542897582	NA	1	1	TRUE	NA	NA	NA	C	coding	672	2019	93	2111	25.0	-4	True	AATAAA	-16
PB.9481.6	chr5	+	3673	18	novel_not_in_catalog	CTNNA1	novel	696	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	494192.2542897582	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	93	2111	35.0	-4	True	AATAAA	-20
PB.1702.11	chr10	-	2938	6	incomplete-splice_match	AC068896.1	ENST00000494792.1	3422	10	-127	141123	-127	-141123	3prime_fragment	FALSE	canonical	1	144596	junction_3	39377.843643348475	NA	4	NA	TRUE	NA	NA	NA	B	coding	236	711	22	732	20.0	19	True	TATAAA	-21
PB.1702.10	chr10	-	3239	6	novel_not_in_catalog	AC068896.1	novel	3422	10	NA	NA	-116	-140762	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	94926.97612249112	NA	5	1	TRUE	NA	NA	NA	B	coding	165	498	175	672	55.0	30	True	ACTAAA	-8
PB.1702.13	chr10	-	1214	6	incomplete-splice_match	AC068896.1	ENST00000494792.1	3422	10	-155	142875	-155	-142875	3prime_fragment	FALSE	canonical	1	144596	junction_3	39377.843643348475	NA	1	NA	TRUE	NA	NA	NA	B	coding	236	711	50	760	10.0	-9	True	AATATA	-13
PB.9481.2	chr5	+	3900	19	novel_not_in_catalog	CTNNA1	novel	696	6	NA	NA	-20	2	any annotated donor/acceptor	FALSE	canonical	1	47	junction_2	564749.2034656721	NA	1	NA	TRUE	NA	NA	NA	C	coding	933	2802	158	2959	40.0	-79	False	AATAAA	-18
PB.3506.1	chr14	+	3196	23	full-splice_match	GPHN	ENST00000478722.5	4297	23	1103	-2	3	2	multi-exon	FALSE	canonical	1	118721	junction_11	27576.712139027022	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	19	2328	15.0	6	True	AATAAA	-29
PB.3506.3	chr14	+	3251	20	novel_in_catalog	GPHN	novel	4193	22	NA	NA	-23	0	intron_retention	FALSE	canonical	1	968	junction_13	44879.978822561556	NA	4	NA	TRUE	NA	NA	NA	C	coding	658	1977	414	2390	35.0	3	True	AATAAA	-22
PB.3506.2	chr14	+	3694	24	novel_in_catalog	GPHN	novel	4193	22	NA	NA	-86	3	intron_retention	FALSE	canonical	1	6819	junction_5	51883.268661031194	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	477	2825	15.0	-452	False	AATAAA	-30
PB.3506.5	chr14	+	2001	3	novel_not_in_catalog	GPHN	novel	4193	22	NA	NA	15	-131865	any annotated donor/acceptor	FALSE	canonical	1	438	junction_2	70073.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5	True	TATAAA	-11
PB.3506.4	chr14	+	3047	23	full-splice_match	GPHN	ENST00000478722.5	4297	23	1078	172	-19	-161	multi-exon	FALSE	canonical	1	118721	junction_11	27576.712139027022	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	44	2353	80.0	1	True	AATACA	-16
PB.3506.7	chr14	+	3679	24	novel_not_in_catalog	GPHN	novel	4193	22	NA	NA	22	0	intron_retention	FALSE	canonical	1	1382	junction_3	53084.840490035866	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	650	2818	35.0	2	True	AATAAA	-22
PB.3506.6	chr14	+	2550	21	incomplete-splice_match	GPHN	ENST00000478722.5	4297	23	749	12668	18	-1	3prime_fragment	FALSE	canonical	1	118721	junction_11	21591.89507957789	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	373	2502	35.0	-2	True	AATAAA	-19
PB.3506.8	chr14	+	2834	23	full-splice_match	GPHN	ENST00000478722.5	4297	23	753	710	22	0	multi-exon	FALSE	canonical	1	118721	junction_11	27576.712139027022	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	369	2678	75.0	2	True	AATGAA	-15
PB.6306.10	chr2	-	5231	4	novel_in_catalog	YWHAQ	novel	2216	5	NA	NA	29	443	intron_retention	FALSE	canonical	1	1410037	junction_3	834171.105998044	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	128	583	50.0	-17	True	NA	NA
PB.8177.4	chr3	-	3946	24	novel_in_catalog	SFMBT1	novel	4548	21	NA	NA	-17	-1045	no_combination_of_known_junctions	FALSE	canonical	1	2205	junction_22	40128.16645862122	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	827	3427	20.0	-14	True	ATTAAA	-15
PB.8177.5	chr3	-	2259	17	novel_in_catalog	SFMBT1	novel	4548	21	NA	NA	-19	-7431	combination_of_known_junctions	FALSE	canonical	1	9334	junction_16	22840.02248717903	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	354	2258	20.0	-8	True	AATACA	-1
PB.8177.6	chr3	-	2211	17	incomplete-splice_match	SFMBT1	ENST00000394752.7	4548	21	78	7431	62	-7431	3prime_fragment	FALSE	canonical	1	44420	junction_16	16533.676451294603	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	306	2210	20.0	-1	True	AATACA	-1
PB.6705.5	chr2	-	2818	16	full-splice_match	SLC35F5	ENST00000245680.6	4412	16	179	1415	-24	146	multi-exon	FALSE	canonical	1	216280	junction_7	58636.056904945435	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	236	1807	20.0	-3	True	AATAAA	-33
PB.3237.2	chr13	-	4697	3	novel_not_in_catalog	LINC01232	novel	1002	3	NA	NA	100	-4	intron_retention	FALSE	canonical	1	3411	junction_2	3641.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	103	312	2117	2428	25.0	-337	False	NA	NA
PB.3237.3	chr13	-	1810	3	novel_not_in_catalog	LINC01232	novel	1002	3	NA	NA	102	1113	any annotated donor/acceptor	FALSE	canonical	1	3411	junction_2	3641.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-335	False	NA	NA
PB.8177.2	chr3	-	3613	21	novel_in_catalog	SFMBT1	novel	4548	21	NA	NA	-34	-1040	no_combination_of_known_junctions	FALSE	canonical	1	2879	junction_20	29783.831065529503	NA	9	1	TRUE	NA	NA	NA	C	coding	866	2601	489	3089	15.0	-31	True	ATTAAA	-20
PB.3237.1	chr13	-	4533	3	novel_in_catalog	LINC01232	novel	1002	3	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	10694	junction_1	355.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	103	312	1943	2254	15.0	-497	False	NA	NA
PB.18.14	chr1	-	2369	11	full-splice_match	CCNL2	ENST00000400809.7	2305	11	-65	1	-49	-1	multi-exon	FALSE	canonical	1	120035	junction_6	414450.8096978941	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	72	1634	25.0	8438	False	AATAAA	-21
PB.18.15	chr1	-	4286	11	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	0	intron_retention	FALSE	canonical	1	8438	junction_8	443210.5241437866	NA	5	2	TRUE	NA	NA	NA	C	coding	298	897	2658	3554	25.0	-23	True	AATAAA	-18
PB.6630.8	chr2	-	5993	4	novel_in_catalog	STARD7	novel	3368	8	NA	NA	2	0	intron_retention	FALSE	canonical	1	783379	junction_3	361092.2231905122	NA	4	NA	TRUE	NA	NA	NA	C	coding	177	534	390	923	40.0	3	True	AATAAA	-18
PB.6630.9	chr2	-	2931	8	novel_not_in_catalog	STARD7	novel	3368	8	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	540509.4067332243	NA	3	NA	TRUE	NA	NA	NA	C	coding	269	810	259	1068	40.0	2	True	AATAAA	-18
PB.18.10	chr1	-	4346	11	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	17735	junction_9	447462.2514084177	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	2715	3611	25.0	-27	True	AATAAA	-21
PB.18.11	chr1	-	3168	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	101290	junction_6	410179.58636860596	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	1537	2433	25.0	-28	True	AATAAA	-21
PB.18.12	chr1	-	3049	11	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	440794.08183219744	NA	2	1	TRUE	NA	NA	NA	C	coding	298	897	1418	2314	25.0	-23	True	AATAAA	-21
PB.18.13	chr1	-	2473	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-28	-1	intron_retention	FALSE	canonical	1	26541	junction_6	424911.66533630964	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	842	1738	25.0	8459	False	AATAAA	-21
PB.5715.5	chr19	-	2062	10	novel_in_catalog	YIPF2	novel	2087	10	NA	NA	10	-32	combination_of_known_junctions	FALSE	canonical	1	80841	junction_1	192148.70997571995	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	118	1068	85.0	27	False	NA	NA
PB.6630.3	chr2	-	2933	7	novel_in_catalog	STARD7	novel	3368	8	NA	NA	-129	0	intron_retention	FALSE	canonical	1	783379	junction_6	328167.4575003168	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	102	617	40.0	-4	True	AATAAA	-18
PB.5715.7	chr19	-	1996	9	novel_in_catalog	YIPF2	novel	2087	10	NA	NA	-10	-32	combination_of_known_junctions	FALSE	canonical	1	46097	junction_6	203851.48886992308	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	156	1019	85.0	-1	True	NA	NA
PB.5715.6	chr19	-	2006	9	novel_in_catalog	YIPF2	novel	2087	10	NA	NA	-4	-32	no_combination_of_known_junctions	FALSE	canonical	1	4488	junction_5	232119.36621273117	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	150	485	85.0	5	True	NA	NA
PB.5715.1	chr19	-	2080	10	full-splice_match	YIPF2	ENST00000586748.5	1550	10	21	-551	-7	-32	multi-exon	FALSE	canonical	1	345352	junction_9	120609.70769847305	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	153	1103	85.0	2	True	NA	NA
PB.6630.7	chr2	-	2960	9	novel_not_in_catalog	STARD7	novel	3368	8	NA	NA	-139	0	any annotated donor/acceptor	FALSE	canonical	1	1525	junction_7	647925.5320188111	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	288	1097	40.0	-14	True	AATAAA	-18
PB.5715.3	chr19	-	2103	10	novel_in_catalog	YIPF2	novel	2087	10	NA	NA	12	-32	combination_of_known_junctions	FALSE	canonical	1	80841	junction_1	168280.58552604236	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	159	1109	85.0	-4	True	NA	NA
PB.12253.8	chrX	+	4307	8	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	-34	-1399	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	25531.88364634721	NA	4	NA	TRUE	NA	NA	NA	C	coding	497	1494	166	1659	75.0	11	True	NA	NA
PB.11230.9	chr8	-	2202	7	novel_not_in_catalog	PIP4P2	novel	2970	7	NA	NA	6	-480	any annotated donor/acceptor	FALSE	canonical	1	5988	junction_5	99197.23621934008	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	97	801	35.0	3	True	AATAAA	-12
PB.6705.4	chr2	-	3721	16	novel_in_catalog	SLC35F5	novel	784	3	NA	NA	6	564	intron_retention	FALSE	canonical	1	22095	junction_15	96902.40582941628	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	739	2292	45.0	-1	True	ATTAAA	-4
PB.812.15	chr1	-	2392	13	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-13	439	combination_of_known_junctions	FALSE	canonical	1	113514	junction_2	116787.86606124323	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	41	1573	80.0	-5	True	NA	NA
PB.11230.1	chr8	-	2374	8	novel_not_in_catalog	PIP4P2	novel	2970	7	NA	NA	-19	3188	any annotated donor/acceptor	FALSE	canonical	1	2241	junction_1	94600.09724700528	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	143	916	30.0	-43	True	AATAAA	-16
PB.9150.2	chr5	+	4842	30	novel_not_in_catalog	TRIO	novel	605	4	NA	NA	-15151	2	any annotated donor/acceptor	FALSE	canonical	1	1695	junction_1	113862.27033399767	NA	0	NA	TRUE	NA	NA	NA	B	coding	1498	4497	74	4570	40.0	-568	False	AATAAA	-18
PB.11230.3	chr8	-	2776	7	full-splice_match	PIP4P2	ENST00000285419.7	2970	7	173	21	-19	-21	multi-exon	FALSE	canonical	1	212716	junction_6	29898.726266069152	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	143	916	30.0	-43	True	NA	NA
PB.812.14	chr1	-	2221	15	novel_not_in_catalog	KHDC4	novel	2947	14	NA	NA	-44	0	any annotated donor/acceptor	FALSE	canonical	1	19685	junction_1	135613.37637059498	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	72	1856	0.0	8502	False	AATAAA	-14
PB.11230.5	chr8	-	2260	6	full-splice_match	PIP4P2	ENST00000518359.5	867	6	-75	-1318	-14	-479	multi-exon	FALSE	canonical	1	6008	junction_2	106987.76920489557	NA	5	2	TRUE	NA	NA	NA	C	coding	166	501	138	638	30.0	-38	True	AATAAA	-13
PB.11230.4	chr8	-	2601	7	full-splice_match	PIP4P2	ENST00000285419.7	2970	7	206	163	-7	-163	multi-exon	FALSE	canonical	1	212716	junction_6	29898.726266069152	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	110	883	35.0	-10	True	ATTAAA	-17
PB.11230.7	chr8	-	2406	8	novel_not_in_catalog	PIP4P2	novel	2970	7	NA	NA	10	-480	any annotated donor/acceptor	FALSE	canonical	1	185	junction_7	123526.80133229289	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	622	1005	35.0	-14	True	AATAAA	-12
PB.10499.2	chr7	+	3693	13	incomplete-splice_match	CDK13	ENST00000181839.9	10135	14	38139	4049	16	-1	5prime_fragment	FALSE	canonical	1	97569	junction_11	80962.53916712895	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	446	3142	50.0	NA	False	AATAAA	-18
PB.7756.8	chr22	+	2771	17	novel_not_in_catalog	GGA1	novel	3159	17	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	13658	junction_13	162782.46854007343	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	24	1919	10.0	13	True	AATAAA	-17
PB.9924.33	chr6	-	2559	7	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-19	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	320724.3031023253	NA	8	1	TRUE	NA	NA	NA	C	coding	109	330	28	357	25.0	0	True	AATAAA	-19
PB.9924.32	chr6	-	1897	6	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-31	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	423204.3536380031	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	40	1098	30.0	-12	True	AATAAA	-20
PB.9924.35	chr6	-	2823	8	full-splice_match	TAPBP	ENST00000434618.6	3759	8	309	627	-29	-627	multi-exon	FALSE	canonical	1	785673	junction_2	142378.02317314944	NA	3	NA	TRUE	NA	NA	NA	C	coding	448	1347	38	1384	30.0	-10	True	NA	NA
PB.10499.1	chr7	+	3816	14	full-splice_match	CDK13	ENST00000340829.10	5455	14	1630	9	0	0	multi-exon	FALSE	canonical	1	209498	junction_5	64391.158347350836	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	734	3250	65.0	491	False	AATAAA	-33
PB.9924.37	chr6	-	2029	8	full-splice_match	TAPBP	ENST00000434618.6	3759	8	304	1426	-34	565	multi-exon	FALSE	canonical	1	785673	junction_2	142378.02317314944	NA	2	NA	TRUE	NA	NA	NA	C	coding	448	1347	43	1389	65.0	-15	True	NA	NA
PB.9924.36	chr6	-	2155	8	full-splice_match	TAPBP	ENST00000434618.6	3759	8	307	1297	-31	694	multi-exon	FALSE	canonical	1	785673	junction_2	142378.02317314944	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	40	1386	30.0	-12	True	NA	NA
PB.4626.1	chr16	+	3596	8	novel_not_in_catalog	ZNF276	novel	1826	11	NA	NA	-77	-267	intron_retention	FALSE	canonical	1	12825	junction_2	100851.09193240886	NA	22	NA	TRUE	NA	NA	NA	A	coding	164	495	712	1206	90.0	540	False	NA	NA
PB.9924.38	chr6	-	1486	8	full-splice_match	TAPBP	ENST00000434618.6	3759	8	318	1955	-20	36	multi-exon	FALSE	canonical	1	785673	junction_2	142378.02317314944	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	29	1375	20.0	-1	True	NA	NA
PB.11137.3	chr8	+	1800	1	novel_in_catalog	TGS1	novel	3782	13	NA	NA	-29	-23758	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-29	True	NA	NA
PB.11576.1	chr9	+	2568	1	novel_in_catalog	AL512625.1	novel	2541	2	NA	NA	64	-21	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.2344.2	chr11	-	2008	6	novel_in_catalog	ESAM	novel	560	4	NA	NA	0	-13	intron_retention	FALSE	canonical	1	58245	junction_2	117250.71382401047	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	137	595	45.0	-1	True	AATAAA	-20
PB.2344.3	chr11	-	4583	1	genic	ESAM	novel	NA	NA	NA	NA	-8	-3471	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	103	312	1307	1618	100.0	-9	True	NA	NA
PB.2344.1	chr11	-	1790	7	full-splice_match	ESAM	ENST00000278927.9	1826	7	-32	68	-26	8	multi-exon	FALSE	canonical	1	105614	junction_6	82901.59703058936	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	163	1335	25.0	1075	False	ATTAAA	-10
PB.157.21	chr1	-	1287	10	incomplete-splice_match	HNRNPR	ENST00000374612.5	2694	11	25	1516	-2	-848	3prime_fragment	FALSE	canonical	1	118260	junction_7	561637.51349029	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1188	100	1287	60.0	-17	True	AATGAA	-5
PB.11137.5	chr8	+	2057	1	novel_in_catalog	TGS1	novel	3782	13	NA	NA	-24	-23496	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-24	True	NA	NA
PB.3574.1	chr14	+	925	3	full-splice_match	BATF	ENST00000286639.6	980	3	24	31	-6	-9	multi-exon	FALSE	canonical	1	259812	junction_1	32747.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	125	378	235	612	55.0	-20	True	AATAAA	-7
PB.11137.4	chr8	+	3844	13	full-splice_match	TGS1	ENST00000260129.5	3782	13	304	-366	-24	364	multi-exon	FALSE	canonical	1	142158	junction_11	44302.11396918762	NA	4	NA	TRUE	NA	NA	NA	C	coding	853	2562	174	2735	45.0	-24	True	AATAAA	-18
PB.1447.7	chr10	-	3761	4	full-splice_match	TYSND1	ENST00000287078.6	3644	4	-125	8	-35	-6	multi-exon	FALSE	canonical	1	116434	junction_3	51162.85675066326	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	126	1826	40.0	-12	True	NA	NA
PB.1447.6	chr10	-	3680	1	novel_in_catalog	AIFM2	novel	3247	9	NA	NA	111	-14369	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	121	366	1208	1573	90.0	-12	True	NA	NA
PB.1447.5	chr10	-	1912	9	novel_not_in_catalog	AIFM2	novel	2570	9	NA	NA	332	795	any annotated donor/acceptor	FALSE	canonical	1	870	junction_8	99318.04002098196	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	593	1714	15.0	457	False	ATTAAA	-22
PB.1447.4	chr10	-	1472	9	full-splice_match	AIFM2	ENST00000307864.2	3243	9	62	1709	62	795	multi-exon	FALSE	canonical	1	138079	junction_8	57310.71249938793	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	153	1274	15.0	187	False	ATTAAA	-22
PB.1447.3	chr10	-	3091	8	novel_in_catalog	AIFM2	novel	2570	9	NA	NA	25	-7	no_combination_of_known_junctions	FALSE	canonical	1	7197	junction_5	111149.4462617143	NA	4	NA	TRUE	NA	NA	NA	C	coding	333	1002	190	1191	40.0	150	False	AATAAA	-12
PB.1447.2	chr10	-	3136	9	full-splice_match	AIFM2	ENST00000307864.2	3243	9	102	5	102	-5	multi-exon	FALSE	canonical	1	138079	junction_8	57310.71249938793	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	113	1234	35.0	-21	True	AATAAA	-14
PB.1447.1	chr10	-	3115	9	novel_not_in_catalog	AIFM2	novel	2570	9	NA	NA	-13782	5	any annotated donor/acceptor	FALSE	canonical	1	453	junction_8	99450.22084314343	NA	5	1	TRUE	NA	NA	NA	C	coding	373	1122	81	1202	10.0	-17	True	AATAAA	-25
PB.8362.2	chr3	-	7820	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	47	1784	6	-1784	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	23	NA	TRUE	NA	NA	NA	C	coding	794	2385	440	2824	50.0	3	True	AATAAA	-17
PB.11137.6	chr8	+	3251	13	full-splice_match	TGS1	ENST00000260129.5	3782	13	528	3	200	-3	multi-exon	FALSE	canonical	1	142158	junction_11	44302.11396918762	NA	1	NA	TRUE	NA	NA	NA	C	coding	760	2283	229	2511	25.0	-3636	False	ATTAAA	-14
PB.6791.5	chr2	-	3901	8	full-splice_match	CYTIP	ENST00000264192.7	2260	8	84	-1725	28	1725	multi-exon	FALSE	canonical	1	525444	junction_7	75255.35095897954	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	39	1118	40.0	30	True	AATACA	-19
PB.1447.9	chr10	-	3461	4	novel_not_in_catalog	TYSND1	novel	3341	3	NA	NA	-11	-1218	any annotated donor/acceptor	FALSE	canonical	1	10272	junction_3	101161.75063179209	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	102	1271	35.0	12	True	AATAAA	-25
PB.1546.4	chr10	+	2437	8	novel_in_catalog	CEP55	novel	2638	9	NA	NA	3	-3	no_combination_of_known_junctions	FALSE	canonical	1	1881	junction_1	131090.63321198188	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	614	1501	25.0	-4	True	AATAAA	-15
PB.1546.3	chr10	+	2296	9	novel_not_in_catalog	CEP55	novel	2638	9	NA	NA	1	-199	any annotated donor/acceptor	FALSE	canonical	1	23751	junction_1	116730.930993032	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	162	1556	30.0	-6	True	AATAAA	-27
PB.1546.2	chr10	+	2499	9	novel_not_in_catalog	CEP55	novel	2638	9	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	1	23751	junction_1	116730.930993032	NA	2	1	TRUE	NA	NA	NA	C	coding	464	1395	168	1562	25.0	-12	True	AATAAA	-16
PB.1546.1	chr10	+	2656	9	full-splice_match	CEP55	ENST00000371485.7	2638	9	-20	2	-20	-2	multi-exon	FALSE	canonical	1	145873	junction_1	84848.5018514617	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	325	1719	25.0	-27	True	AATAAA	-16
PB.11137.8	chr8	+	3370	12	novel_in_catalog	TGS1	novel	3782	13	NA	NA	-5	-2	no_combination_of_known_junctions	FALSE	canonical	1	1678	junction_5	79703.61752141493	NA	2	NA	TRUE	NA	NA	NA	C	coding	824	2475	155	2629	25.0	-5	True	ATTAAA	-15
PB.288.1	chr1	-	1534	5	full-splice_match	TRAPPC3	ENST00000373162.5	1056	5	2	-480	1	-2	multi-exon	FALSE	canonical	1	51640	junction_4	435916.27950502146	NA	8	NA	TRUE	NA	NA	NA	C	coding	134	405	501	905	15.0	-10	True	AATAAA	-24
PB.288.2	chr1	-	1770	4	novel_in_catalog	TRAPPC3	novel	1114	3	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	572134	junction_3	175008.26433628786	NA	2	NA	TRUE	NA	NA	NA	C	coding	161	486	126	611	15.0	-18	True	AATAAA	-24
PB.288.3	chr1	-	1294	5	full-splice_match	TRAPPC3	ENST00000373166.7	1265	5	-32	3	-4	-3	multi-exon	FALSE	canonical	1	572134	junction_4	234359.60808178954	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	124	666	15.0	-16	True	AATAAA	-23
PB.11908.1	chr9	+	1292	9	full-splice_match	EGFL7	ENST00000371698.3	1282	9	-11	1	-7	0	multi-exon	FALSE	canonical	1	33925	junction_1	274921.6817013245	NA	0	NA	TRUE	NA	NA	NA	A	coding	273	822	80	901	15.0	13	True	AATAAA	-12
PB.9845.19	chr6	+	2560	4	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	2	-12	intron_retention	FALSE	non_canonical	0	0	junction_3	2793362.02925149	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	617	1417	15.0	2	True	AATAAA	-18
PB.11477.14	chr9	-	2010	11	full-splice_match	MLLT3	ENST00000630269.2	2040	11	-64	94	-64	0	multi-exon	FALSE	canonical	1	10010	junction_10	85233.95516629508	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	163	1860	25.0	0	True	AATAAA	-16
PB.11477.12	chr9	-	2066	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	53	4653	28	-25	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	235	1941	80.0	8	True	AAAACA	-25
PB.3868.6	chr15	+	4430	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	24	4737	-12	1339	multi-exon	FALSE	canonical	1	71000	junction_1	21179.19300273062	NA	4	NA	TRUE	NA	NA	NA	C	coding	351	1056	198	1253	25.0	-82	False	ATTAAA	-17
PB.11477.10	chr9	-	2776	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	26	3970	1	-558	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	262	1968	50.0	-19	True	AATAAA	-15
PB.5709.1	chr19	-	1982	1	full-splice_match	ILF3-DT	ENST00000591501.1	1983	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	-4	True	NA	NA
PB.10633.1	chr7	+	3227	18	full-splice_match	PTPN12	ENST00000248594.10	3406	18	180	-1	-62	1	multi-exon	FALSE	canonical	1	412499	junction_1	142876.05099998208	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	93	2435	5.0	-16	True	ATTAAA	-26
PB.6791.6	chr2	-	2128	8	full-splice_match	CYTIP	ENST00000264192.7	2260	8	130	2	74	-2	multi-exon	FALSE	canonical	1	525444	junction_7	75255.35095897954	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	98	1072	10.0	14	True	AATAAA	-16
PB.3868.7	chr15	+	2654	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	37	6500	1	-263	multi-exon	FALSE	canonical	1	71000	junction_1	21179.19300273062	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	185	1240	55.0	1	True	AATAAA	-14
PB.3191.20	chr13	-	3063	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	-11	7552	-11	-46	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	113	2989	25.0	-1	True	AAGAAA	-27
PB.3191.21	chr13	-	2997	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	-11	7618	-11	-112	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	1	NA	TRUE	NA	NA	NA	C	coding	958	2877	113	2989	55.0	-1	True	AAAAAG	-30
PB.7756.5	chr22	+	2537	15	full-splice_match	GGA1	ENST00000325180.12	2528	15	-10	1	0	0	multi-exon	FALSE	canonical	1	32892	junction_9	167310.88226950757	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	39	1685	10.0	-2	True	AATAAA	-17
PB.10323.13	chr6	-	2069	5	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	289	-6	any annotated donor/acceptor	FALSE	canonical	1	479	junction_4	3091.5929045558373	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	0	True	AATAAA	-13
PB.1882.6	chr11	+	6005	15	novel_in_catalog	HIPK3	novel	3668	16	NA	NA	-262	-500	no_combination_of_known_junctions	FALSE	canonical	1	7025	junction_1	126275.87699104348	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	612	3053	30.0	-71	True	TTTAAA	-36
PB.6753.8	chr2	+	4324	10	full-splice_match	CCNT2	ENST00000295238.10	4491	10	-6	173	-3	1	multi-exon	FALSE	canonical	1	125117	junction_6	49775.05278329946	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	37	2028	30.0	-33	True	AATAAA	-21
PB.7890.2	chr22	-	2838	11	novel_in_catalog	LMF2	novel	2582	14	NA	NA	-6	0	intron_retention	FALSE	canonical	1	253522	junction_10	165044.95882164958	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	23	1174	0.0	-4	True	AATAAA	-20
PB.7266.3	chr20	+	1712	11	incomplete-splice_match	PHF20	ENST00000374012.7	5922	18	39	37072	0	-7	3prime_fragment	FALSE	canonical	1	213850	junction_10	20931.03949377575	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1620	91	1710	80.0	7	True	AATAAA	-36
PB.10633.3	chr7	+	3097	18	full-splice_match	PTPN12	ENST00000415482.6	2316	18	8	-789	8	-2	multi-exon	FALSE	canonical	1	9050	junction_1	194885.64306730698	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	323	2308	5.0	0	True	ATTAAA	-23
PB.10323.15	chr6	-	2764	5	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	-4	-30	any annotated donor/acceptor	FALSE	canonical	1	2278	junction_4	2567.524634740629	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.10323.14	chr6	-	1711	2	full-splice_match	PDE10A	ENST00000455853.1	1822	2	105	6	-11	-6	multi-exon	FALSE	canonical	1	17314	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	0	True	AATAAA	-13
PB.6753.2	chr2	+	4847	10	full-splice_match	CCNT2	ENST00000295238.10	4491	10	22	-378	0	378	multi-exon	FALSE	canonical	1	125117	junction_6	49775.05278329946	NA	32	1	TRUE	NA	NA	NA	C	coding	663	1992	9	2000	50.0	-5	True	ATTAAA	-14
PB.7890.5	chr22	-	2668	14	novel_not_in_catalog	LMF2	novel	2582	14	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	1	9185	junction_13	194564.28540597696	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	178	2226	0.0	-15	True	AATAAA	-20
PB.10633.2	chr7	+	3083	17	novel_in_catalog	PTPN12	novel	3406	18	NA	NA	-28	0	no_combination_of_known_junctions	FALSE	canonical	1	4069	junction_1	201750.56559190198	NA	1	1	TRUE	NA	NA	NA	C	coding	661	1986	307	2292	5.0	-582	False	ATTAAA	-25
PB.6753.6	chr2	+	4426	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-7	2498	-4	1	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	38	2230	30.0	-34	True	AATAAA	-21
PB.9599.1	chr5	-	4049	4	full-splice_match	PWWP2A	ENST00000456329.7	3991	4	-55	-3	-55	3	multi-exon	FALSE	canonical	1	41701	junction_2	21750.332309083362	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	91	1773	40.0	-29	False	AATAAA	-23
PB.6753.4	chr2	+	5697	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-8	1228	-5	1097	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	39	2231	35.0	-35	True	AATAAA	-20
PB.7890.4	chr22	-	2713	13	novel_in_catalog	LMF2	novel	2582	14	NA	NA	-24	0	intron_retention	FALSE	canonical	1	253522	junction_12	151663.14480862863	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	41	1738	0.0	-22	False	AATAAA	-20
PB.7295.4	chr20	+	3333	18	incomplete-splice_match	TOP1	ENST00000361337.2	3738	21	47350	3	47350	-3	5prime_fragment	FALSE	canonical	1	73076	junction_15	331134.6701232808	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	587	2146	25.0	-4996	False	AATAAA	-18
PB.8362.4	chr3	-	7580	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	3	2068	3	-2068	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	7	NA	TRUE	NA	NA	NA	C	coding	794	2385	484	2868	20.0	-41	False	NA	NA
PB.7295.2	chr20	+	3528	21	full-splice_match	TOP1	ENST00000361337.2	3738	21	5	205	5	-205	multi-exon	FALSE	canonical	1	73076	junction_18	315041.6196930812	NA	1	NA	TRUE	NA	NA	NA	C	coding	765	2298	246	2543	75.0	0	True	NA	NA
PB.7295.3	chr20	+	3531	20	novel_not_in_catalog	TOP1	novel	3738	21	NA	NA	20021	-3	any annotated donor/acceptor	FALSE	canonical	1	296	junction_1	370518.28905697266	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	785	2344	25.0	NA	False	AATAAA	-18
PB.5404.1	chr18	+	1089	7	full-splice_match	PSMG2	ENST00000317615.10	1686	7	595	2	-2	-2	multi-exon	FALSE	canonical	1	629896	junction_1	197858.044830968	NA	0	NA	TRUE	NA	NA	NA	A	coding	264	795	88	882	30.0	-23	True	AATAAA	-17
PB.9599.7	chr5	-	3271	2	full-splice_match	PWWP2A	ENST00000307063.8	3346	2	19	56	18	-56	multi-exon	FALSE	canonical	1	90591	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	17	2284	85.0	45	True	NA	NA
PB.11780.12	chr9	+	1485	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	-21	1983	-14	-1114	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	167	1108	15.0	-2	True	NA	NA
PB.9599.6	chr5	-	3416	3	full-splice_match	PWWP2A	ENST00000520662.1	407	3	-645	-2364	-55	-55	multi-exon	FALSE	canonical	1	13515	junction_2	5433.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	812	2428	90.0	-29	False	NA	NA
PB.2707.15	chr12	+	2621	13	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	998149	junction_11	348002.8059564399	NA	4	NA	TRUE	NA	NA	NA	C	coding	317	954	1022	1975	25.0	2	True	AATAAA	-14
PB.2707.14	chr12	+	2653	1	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	517	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-2	True	NA	NA
PB.2707.17	chr12	+	2007	10	incomplete-splice_match	OS9	ENST00000552285.5	2135	14	2318	-557	777	0	5prime_fragment	FALSE	canonical	1	998149	junction_8	437917.5142439273	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	288	1361	25.0	2128	False	AATAAA	-14
PB.2707.16	chr12	+	2881	14	novel_in_catalog	OS9	novel	2135	14	NA	NA	2	0	intron_retention	FALSE	canonical	1	1071907	junction_6	405656.9125691951	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	1171	2235	25.0	4	True	AATAAA	-14
PB.2707.11	chr12	+	2034	8	novel_not_in_catalog	OS9	novel	2135	14	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	749742.1427787623	NA	11	1	TRUE	NA	NA	NA	C	coding	299	900	489	1388	25.0	-4	True	AATAAA	-14
PB.2707.10	chr12	+	2728	13	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	998149	junction_11	401372.4920516477	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	1183	2082	25.0	-8	True	AATAAA	-14
PB.2707.13	chr12	+	2540	15	full-splice_match	OS9	ENST00000315970.11	2691	15	151	0	112	0	multi-exon	FALSE	canonical	1	1071907	junction_6	391894.8048929283	NA	2	NA	TRUE	NA	NA	NA	C	coding	629	1890	5	1894	25.0	127	False	AATAAA	-14
PB.2707.12	chr12	+	3244	12	novel_in_catalog	OS9	novel	2135	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	1074334	junction_9	382235.11653288617	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	1534	2598	25.0	-2	True	AATAAA	-14
PB.1457.8	chr10	-	2701	13	novel_in_catalog	PSAP	novel	2872	14	NA	NA	39	0	no_combination_of_known_junctions	FALSE	canonical	1	35534	junction_2	3167081.1121603185	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	66	1559	15.0	9157	False	AATAAA	-15
PB.10937.7	chr7	+	3191	15	novel_in_catalog	NUB1	novel	3180	15	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	21215	junction_1	196488.9337438002	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	167	1972	40.0	-10	True	AATAAA	-18
PB.10937.4	chr7	+	3137	15	full-splice_match	NUB1	ENST00000568733.5	3210	15	68	5	-25	-5	multi-exon	FALSE	canonical	1	55471	junction_12	198648.32860446358	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	71	1918	40.0	-33	True	AATAAA	-18
PB.10937.5	chr7	+	3072	15	novel_not_in_catalog	NUB1	novel	3180	15	NA	NA	-20	-5	any annotated donor/acceptor	FALSE	canonical	1	5470	junction_2	210368.93672731388	NA	3	NA	TRUE	NA	NA	NA	C	coding	595	1788	66	1853	40.0	-28	True	AATAAA	-18
PB.10937.2	chr7	+	1837	15	full-splice_match	NUB1	ENST00000413040.6	3180	15	122	1221	9	-53	multi-exon	FALSE	canonical	1	236234	junction_1	164272.57220771763	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	29	1834	50.0	9	True	ACTAAA	-3
PB.2707.18	chr12	+	2074	10	novel_in_catalog	OS9	novel	2135	14	NA	NA	53	-1	combination_of_known_junctions	FALSE	canonical	1	424985	junction_1	570311.6461746113	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	188	1429	25.0	1	True	AATAAA	-13
PB.5973.1	chr19	-	1255	8	novel_in_catalog	YIF1B	novel	1181	8	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	89647	junction_7	358914.65328977926	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	124	1017	10.0	6032	False	AATAAA	-17
PB.10937.1	chr7	+	3067	15	full-splice_match	NUB1	ENST00000413040.6	3180	15	108	5	3	-5	multi-exon	FALSE	canonical	1	236234	junction_1	164272.57220771763	NA	1	1	TRUE	NA	NA	NA	C	coding	601	1806	43	1848	40.0	-5	True	AATAAA	-18
PB.1578.1	chr10	-	1404	3	full-splice_match	AVPI1	ENST00000370626.3	1457	3	51	2	51	-2	multi-exon	FALSE	canonical	1	234563	junction_2	38161.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	147	444	518	961	20.0	0	True	AATAAA	-13
PB.9845.12	chr6	+	2709	7	incomplete-splice_match	HLA-E	ENST00000376630.4	2601	8	45	12	0	-12	intron_retention	FALSE	canonical	1	3991824	junction_1	1025770.342147698	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	21	1097	15.0	0	True	AATAAA	-18
PB.7289.9	chr20	+	4033	9	incomplete-splice_match	RALGAPB	ENST00000397042.7	8652	30	28	58499	28	20357	3prime_fragment	FALSE	canonical	1	102794	junction_1	53945.41780760902	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	257	1810	10.0	-3	True	ATTAAA	-18
PB.7289.8	chr20	+	5221	26	incomplete-splice_match	RALGAPB	ENST00000262879.10	8663	30	27	10619	27	-6828	3prime_fragment	FALSE	canonical	1	102794	junction_1	51626.32625240731	NA	0	NA	TRUE	NA	NA	NA	C	coding	1344	4035	258	4292	85.0	-4	True	NA	NA
PB.8286.1	chr3	-	3049	11	full-splice_match	IFT57	ENST00000264538.3	3203	11	153	1	18	-1	multi-exon	FALSE	canonical	1	428327	junction_10	81243.0421441738	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	96	1385	20.0	-9	True	NA	NA
PB.6078.4	chr19	-	2361	23	full-splice_match	ERCC2	ENST00000391945.9	4122	23	10	1751	10	7	multi-exon	FALSE	canonical	1	117375	junction_22	84949.57669774485	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	38	2320	5.0	-21	True	CATAAA	-20
PB.6078.5	chr19	-	3027	10	novel_in_catalog	ERCC2	novel	4122	23	NA	NA	0	2031	intron_retention	FALSE	canonical	1	117375	junction_9	61213.43404660269	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	48	1121	85.0	-31	True	NA	NA
PB.6078.6	chr19	-	2950	11	incomplete-splice_match	ERCC2	ENST00000391945.9	4122	23	3	12118	3	2031	3prime_fragment	FALSE	canonical	1	117375	junction_10	58072.16420807821	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	45	1274	85.0	-28	True	NA	NA
PB.7289.6	chr20	+	5613	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	27	-158	combination_of_known_junctions	FALSE	canonical	1	102794	junction_1	51383.9365020537	NA	4	NA	TRUE	NA	NA	NA	C	coding	1495	4488	258	4745	30.0	-4	True	ATTAAA	-38
PB.7289.1	chr20	+	8684	30	full-splice_match	RALGAPB	ENST00000262879.10	8663	30	-26	5	-26	-3	multi-exon	FALSE	canonical	1	102794	junction_1	51166.531505161925	NA	1	NA	TRUE	NA	NA	NA	C	coding	1494	4485	311	4795	20.0	-103	False	ATTAAA	-21
PB.6078.1	chr19	-	4139	23	full-splice_match	ERCC2	ENST00000391945.9	4122	23	3	-20	3	20	multi-exon	TRUE	canonical	1	117375	junction_22	84949.57669774485	NA	1	NA	TRUE	NA	NA	NA	C	coding	760	2283	45	2327	5.0	-28	True	NA	NA
PB.6078.2	chr19	-	3052	12	novel_not_in_catalog	ERCC2	novel	4122	23	NA	NA	6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	94776.21005032926	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	42	1271	10.0	-25	True	NA	NA
PB.6078.3	chr19	-	2812	23	full-splice_match	ERCC2	ENST00000391945.9	4122	23	0	1310	0	244	multi-exon	FALSE	canonical	1	117375	junction_22	84949.57669774485	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	48	2330	10.0	-31	True	AGTAAA	-18
PB.8641.4	chr4	+	1290	4	full-splice_match	ZNF595	ENST00000509152.3	1072	4	15	-233	-10	233	multi-exon	FALSE	canonical	1	61085	junction_3	51388.425417489576	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	NA	NA
PB.3884.1	chr15	+	1758	12	novel_not_in_catalog	PIGB	novel	1812	9	NA	NA	100	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	47710.856070450114	NA	0	NA	TRUE	NA	NA	NA	A	coding	458	1377	167	1543	15.0	0	True	AATAAA	-18
PB.8641.5	chr4	+	3488	3	full-splice_match	ZNF595	ENST00000502981.2	747	3	-10	-2731	-10	2731	multi-exon	FALSE	canonical	1	137054	junction_2	24467.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-2	True	NA	NA
PB.911.8	chr1	+	2854	19	full-splice_match	DCAF6	ENST00000312263.10	3186	19	-44	376	3	-328	multi-exon	FALSE	canonical	1	142654	junction_7	260672.0385755553	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	249	2831	35.0	-32	True	AATAAA	-20
PB.10353.19	chr7	+	4292	22	novel_in_catalog	SUN1	novel	520	4	NA	NA	-2	1	no_combination_of_known_junctions	FALSE	canonical	1	15529	junction_7	188984.13950565766	NA	0	NA	TRUE	NA	NA	NA	B	coding	888	2667	54	2720	40.0	-2	True	AATAAA	-23
PB.6359.2	chr2	-	3532	8	full-splice_match	KIF3C	ENST00000264712.7	5344	8	617	1195	617	962	multi-exon	FALSE	canonical	1	211575	junction_3	48432.39051481552	NA	12	1	TRUE	NA	NA	NA	C	coding	759	2280	66	2345	60.0	843	False	AGTAAA	-6
PB.8362.6	chr3	-	4254	9	novel_not_in_catalog	ZNF148	novel	9651	9	NA	NA	2	1044	intron_retention	FALSE	canonical	1	3915	junction_8	72185.94419448983	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	544	2928	25.0	NA	False	AATAAA	-18
PB.5135.15	chr17	-	3362	2	full-splice_match	SRSF1	ENST00000578430.1	689	2	67	-2740	-6	-9	multi-exon	FALSE	canonical	1	2064121	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	143	547	40.0	-56	True	AATAAA	-9
PB.12047.9	chrX	+	3254	24	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	791837.6591074866	NA	1	1	TRUE	NA	NA	NA	C	coding	992	2979	77	3055	5.0	0	True	AATAAA	-17
PB.2711.2	chr12	-	3140	4	incomplete-splice_match	METTL1	ENST00000324871.11	2066	6	667	112	-7	-1	intron_retention	FALSE	canonical	1	217202	junction_3	11333.976266077145	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	2143	2727	15.0	-22	True	NA	NA
PB.5135.16	chr17	-	3151	4	full-splice_match	SRSF1	ENST00000258962.4	1513	4	-292	-1346	-292	-10	multi-exon	FALSE	canonical	1	1687503	junction_2	354759.4543032723	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	502	1248	40.0	-5	True	AATAAA	-8
PB.5135.11	chr17	-	2966	3	full-splice_match	SRSF1	ENST00000582730.6	3117	3	9	142	9	-9	multi-exon	FALSE	canonical	1	1687503	junction_1	188309.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	116	721	40.0	-29	True	AATAAA	-9
PB.5135.10	chr17	-	1967	4	full-splice_match	SRSF1	ENST00000581979.5	1720	4	58	-305	58	-9	multi-exon	FALSE	canonical	1	544443	junction_1	646172.3630741948	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	38	643	40.0	459	False	AATAAA	-9
PB.5135.13	chr17	-	3772	1	genic	SRSF1_AC015813.2	novel	NA	NA	NA	NA	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-50	True	AATAAA	-9
PB.5135.12	chr17	-	1467	6	novel_in_catalog	AC015813.2	novel	2270	6	NA	NA	0	-14464	no_combination_of_known_junctions	FALSE	canonical	1	77625	junction_2	931136.990354051	NA	0	NA	TRUE	NA	NA	NA	B	coding	253	762	110	871	40.0	-23	True	AATAAA	-9
PB.3015.4	chr12	-	2185	8	novel_not_in_catalog	SLC15A4	novel	2779	8	NA	NA	-55	1	any annotated donor/acceptor	FALSE	canonical	1	115	junction_7	163514.11216984873	NA	0	NA	TRUE	NA	NA	NA	B	coding	149	450	465	914	5.0	-81	True	TATAAA	-24
PB.12047.1	chrX	+	3080	24	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	-111	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_23	831621.3209098508	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	202	3054	10.0	-8768	False	AATAAA	-16
PB.12047.2	chrX	+	3436	26	full-splice_match	UBA1	ENST00000377351.8	3466	26	29	1	29	1	multi-exon	FALSE	canonical	1	311163	junction_1	731842.6387440338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	62	3238	10.0	-16	True	AATAAA	-16
PB.12047.3	chrX	+	3486	26	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	29	1	any annotated donor/acceptor	FALSE	canonical	1	753	junction_1	769246.2177411588	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	112	3288	10.0	-16	True	AATAAA	-16
PB.12047.4	chrX	+	3571	26	full-splice_match	UBA1	ENST00000335972.10	3559	26	-13	1	0	1	multi-exon	FALSE	canonical	1	993590	junction_1	661948.3689531129	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3177	197	3373	10.0	0	True	AATAAA	-16
PB.12047.5	chrX	+	3678	27	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	-27	1	any annotated donor/acceptor	FALSE	canonical	1	21329	junction_1	879074.3290717765	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	302	3478	5.0	0	True	AATAAA	-18
PB.12047.6	chrX	+	3459	26	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	-2	1	any annotated donor/acceptor	FALSE	canonical	1	4378	junction_16	813440.4278655445	NA	8	1	TRUE	NA	NA	NA	C	coding	1020	3063	199	3261	10.0	-2	True	AATAAA	-16
PB.12047.7	chrX	+	3618	27	novel_in_catalog	UBA1	novel	3466	26	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	15774	junction_1	877200.178975754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	244	3420	10.0	0	True	AATAAA	-16
PB.10812.7	chr7	-	5237	4	novel_in_catalog	NDUFA5	novel	5608	5	NA	NA	-6	-58	intron_retention	FALSE	canonical	1	387220	junction_3	59927.34358092862	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-11	True	ATTAAA	-15
PB.11679.8	chr9	-	1739	4	novel_in_catalog	TRIM14	novel	1792	7	NA	NA	-8	1064	no_combination_of_known_junctions	FALSE	canonical	1	6500	junction_1	105309.79964635559	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	602	1105	75.0	-1	True	NA	NA
PB.8641.2	chr4	+	2206	1	novel_in_catalog	ZNF595	novel	2911	4	NA	NA	0	-5014	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	144	435	1090	1524	30.0	-6156	False	NA	NA
PB.11679.5	chr9	-	4216	4	novel_in_catalog	TRIM14	novel	1792	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	6500	junction_1	105309.79964635559	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	599	1102	20.0	2	True	AATAAA	-20
PB.11679.6	chr9	-	2332	7	novel_not_in_catalog	TRIM14	novel	1792	7	NA	NA	0	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	92970.39617892711	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	25	1353	20.0	7	True	AATAAA	-20
PB.8641.3	chr4	+	5011	1	novel_in_catalog	ZNF595	novel	2911	4	NA	NA	12	-2188	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	106	321	2629	2949	65.0	-5	True	NA	NA
PB.8362.7	chr3	-	4178	10	novel_in_catalog	ZNF148	novel	9651	9	NA	NA	16	1044	intron_retention	FALSE	canonical	1	3795	junction_6	88299.32243032401	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	468	2852	25.0	13	False	AATAAA	-18
PB.11679.2	chr9	-	4318	5	novel_in_catalog	TRIM14	novel	1792	7	NA	NA	-13	0	intron_retention	FALSE	canonical	1	7233	junction_2	91623.79155922058	NA	8	NA	TRUE	NA	NA	NA	C	coding	180	543	38	580	25.0	-6	True	AATAAA	-21
PB.11543.16	chr9	+	2074	8	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	42542	0	any annotated donor/acceptor	TRUE	canonical	1	179	junction_2	113310.35906837504	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	114	1196	35.0	-19	True	AATAAA	-13
PB.11543.17	chr9	+	1986	8	novel_in_catalog	ZCCHC7	novel	2619	9	NA	NA	80	0	combination_of_known_junctions	FALSE	canonical	1	6625	junction_1	89271.37590492926	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	347	1108	35.0	0	True	AATAAA	-13
PB.11543.14	chr9	+	2023	8	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	42516	-1	any annotated donor/acceptor	FALSE	canonical	1	6570	junction_1	89288.26335241266	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	385	1146	35.0	0	True	AATAAA	-12
PB.11543.15	chr9	+	2052	9	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	42522	0	any annotated donor/acceptor	FALSE	canonical	1	611	junction_2	107204.00434918464	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	413	1174	35.0	6	True	AATAAA	-13
PB.11543.12	chr9	+	2268	10	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	42503	-1	any annotated donor/acceptor	FALSE	canonical	1	1503	junction_2	113582.32101948278	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	153	1391	35.0	1	True	AATAAA	-12
PB.11543.13	chr9	+	2162	9	novel_not_in_catalog	ZCCHC7	novel	2619	9	NA	NA	42503	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	106274.0033468175	NA	2	1	TRUE	NA	NA	NA	C	coding	376	1131	153	1283	30.0	1	True	AATAAA	-14
PB.11543.10	chr9	+	2820	9	full-splice_match	ZCCHC7	ENST00000534928.5	2828	9	10	-2	3	-1	multi-exon	FALSE	canonical	1	3433	junction_1	94628.5697119764	NA	2	NA	TRUE	NA	NA	NA	C	coding	542	1629	312	1940	30.0	34	True	AATAAA	-15
PB.11543.18	chr9	+	1580	4	incomplete-splice_match	ZCCHC7	ENST00000496099.1	721	5	457	-980	457	-1	5prime_fragment	FALSE	canonical	1	213527	junction_3	17441.54298092791	NA	1	NA	TRUE	NA	NA	NA	C	coding	94	285	419	703	35.0	0	True	AATAAA	-12
PB.3009.3	chr12	-	528	1	full-splice_match	UBC	ENST00000536769.1	3745	1	3173	44	1890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	153	462	1	462	10.0	7942	False	AATAAA	-15
PB.3009.2	chr12	-	2020	1	full-splice_match	UBC	ENST00000536769.1	3745	1	1681	44	398	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	609	1830	125	1954	10.0	6450	False	AATAAA	-15
PB.3009.1	chr12	-	2369	2	full-splice_match	UBC	ENST00000339647.5	2688	2	319	0	203	0	multi-exon	FALSE	canonical	1	19872015	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	685	2058	246	2303	10.0	-7	True	AATAAA	-15
PB.530.5	chr1	+	3240	4	full-splice_match	LRRC8D	ENST00000525774.5	588	4	188	-2840	170	-1	multi-exon	FALSE	canonical	1	7345	junction_2	15071.49416024245	NA	5	1	TRUE	NA	NA	NA	C	coding	858	2577	309	2885	15.0	2	True	ATTAAA	-19
PB.3009.4	chr12	-	299	2	novel_not_in_catalog	UBC	novel	1303	4	NA	NA	1890	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	7942	False	AATAAA	-14
PB.6850.33	chr2	-	2092	8	full-splice_match	WIPF1	ENST00000359761.7	2003	8	-47	-42	-14	42	multi-exon	FALSE	canonical	1	75247	junction_7	214815.19339380148	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	196	1707	5.0	-52	True	ATTAAA	-36
PB.6169.2	chr19	+	3153	1	novel_in_catalog	ZNF175	novel	6535	5	NA	NA	5217	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	591	1776	108	1883	15.0	-8000	False	NA	NA
PB.10725.9	chr7	+	5227	14	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-11	15924	intron_retention	FALSE	non_canonical	0	0	junction_10	273213.47124111815	NA	7	1	TRUE	NA	NA	NA	B	coding	227	684	4097	4780	15.0	0	True	AATAAA	-15
PB.10725.8	chr7	+	3191	17	novel_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-11	15842	intron_retention	FALSE	canonical	1	70529	junction_11	245306.35538373713	NA	0	NA	TRUE	NA	NA	NA	B	coding	227	684	2143	2826	10.0	0	True	AATACA	-29
PB.9371.5	chr5	+	3926	28	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	9	16	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	87418.67104328421	NA	3	NA	TRUE	NA	NA	NA	C	coding	1124	3375	501	3875	15.0	-28	True	TATAAA	-15
PB.8805.10	chr4	-	5363	33	novel_not_in_catalog	UBA6	novel	9564	33	NA	NA	6	2045	any annotated donor/acceptor	FALSE	canonical	1	12271	junction_7	75248.60089593625	NA	3	1	TRUE	NA	NA	NA	C	coding	777	2334	55	2388	40.0	-26	True	AATAAA	-11
PB.2213.12	chr11	-	3839	1	novel_in_catalog	CTSC	novel	1921	7	NA	NA	0	838	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	163	492	2085	2576	75.0	-1	True	TTTAAA	-24
PB.2213.11	chr11	-	4367	1	novel_in_catalog	CTSC	novel	1921	7	NA	NA	0	1366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	163	492	2085	2576	70.0	-1	True	AATAGA	-20
PB.2728.11	chr12	+	3378	5	novel_not_in_catalog	RASSF3	novel	1060	6	NA	NA	1754	-4	any annotated donor/acceptor	FALSE	canonical	1	928	junction_1	171438.88092754077	NA	3	NA	TRUE	NA	NA	NA	C	coding	168	507	221	727	15.0	-8051	False	ATTAAA	-14
PB.10725.1	chr7	+	3569	17	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	7	15930	intron_retention	TRUE	non_canonical	0	0	junction_13	262964.88409909414	NA	2	NA	TRUE	NA	NA	NA	B	coding	227	684	2433	3116	15.0	-9	True	AATAAA	-21
PB.10725.3	chr7	+	3875	14	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	13	15832	intron_retention	FALSE	non_canonical	0	0	junction_10	271158.68657174456	NA	6	1	TRUE	NA	NA	NA	B	coding	227	684	2837	3520	10.0	-3	True	AATACA	-19
PB.10725.2	chr7	+	4437	16	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	11	15834	intron_retention	FALSE	non_canonical	0	0	junction_12	242568.53670339577	NA	2	NA	TRUE	NA	NA	NA	B	coding	227	684	3397	4080	10.0	-5	True	AATACA	-21
PB.10725.5	chr7	+	3642	4	incomplete-splice_match	STAG3L5P-PVRIG2P-PILRB	ENST00000483329.6	819	7	-9	3132	0	-3132	3prime_fragment	FALSE	canonical	1	320920	junction_1	91924.01485768316	NA	1	1	TRUE	NA	NA	NA	A	coding	125	378	2819	3196	80.0	0	True	NA	NA
PB.10725.4	chr7	+	4365	16	novel_in_catalog	STAG3L5P	novel	1255	6	NA	NA	14	15831	intron_retention	FALSE	canonical	1	143600	junction_4	223689.99681142054	NA	0	NA	TRUE	NA	NA	NA	B	coding	227	684	3328	4011	10.0	-2	True	AATACA	-18
PB.10725.7	chr7	+	3355	17	novel_not_in_catalog	STAG3L5P	novel	1255	6	NA	NA	-11	15832	intron_retention	FALSE	non_canonical	0	0	junction_13	287934.55008266825	NA	5	NA	TRUE	NA	NA	NA	B	coding	332	999	2002	3000	10.0	0	True	AATACA	-19
PB.10725.6	chr7	+	3525	4	incomplete-splice_match	STAG3L5P	ENST00000473757.5	1255	6	35	2821	-11	-675	3prime_fragment	FALSE	canonical	1	169241	junction_1	151314.13078096838	NA	1	NA	TRUE	NA	NA	NA	B	coding	125	378	2702	3079	80.0	0	True	NA	NA
PB.4106.4	chr15	-	2689	3	novel_in_catalog	LYSMD4	novel	2356	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	19486	junction_2	1678.0	NA	23	NA	TRUE	NA	NA	NA	C	coding	296	891	85	975	25.0	10	True	AATAAA	-20
PB.11780.19	chr9	+	2546	10	full-splice_match	NEK6	ENST00000545174.5	2573	10	27	0	17	0	multi-exon	FALSE	canonical	1	37822	junction_1	217680.49572818677	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	114	1055	30.0	-45	True	AATAAA	-41
PB.4106.5	chr15	-	2765	3	full-splice_match	LYSMD4	ENST00000409796.5	2672	3	-97	4	1	0	multi-exon	FALSE	canonical	1	7281	junction_2	7780.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	161	1051	25.0	-6	True	AATAAA	-20
PB.4106.6	chr15	-	2409	2	full-splice_match	LYSMD4	ENST00000545021.2	2431	2	13	9	6	-1	multi-exon	FALSE	canonical	1	4063	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	184	696	25.0	-1	True	AATAAA	-19
PB.12369.7	chrX	-	2596	6	incomplete-splice_match	TMLHE	ENST00000369439.4	1248	7	-41	12890	18	-12890	3prime_fragment	FALSE	canonical	1	147438	junction_1	8306.320798042898	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	129	1127	20.0	-12	True	AATAAA	-19
PB.4106.7	chr15	-	4108	1	novel_in_catalog	LYSMD4	novel	2222	2	NA	NA	3	55	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	103	309	3800	4108	10.0	-4	True	NA	NA
PB.5672.1	chr19	-	2203	12	novel_in_catalog	TIMM44	novel	868	4	NA	NA	-64	-1	intron_retention	FALSE	canonical	1	38174	junction_8	206655.2880499111	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	1157	1735	25.0	-3	True	AATAAA	-21
PB.4111.1	chr15	-	4179	2	incomplete-splice_match	AC015712.2	ENST00000560461.1	688	3	-461	-2440	-19	-14	intron_retention	FALSE	canonical	1	1995	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	102	309	3099	3407	40.0	-92	False	NA	NA
PB.5672.3	chr19	-	3310	12	novel_not_in_catalog	TIMM44	novel	868	4	NA	NA	-60	-4	intron_retention	FALSE	canonical	1	3775	junction_6	241484.8248425554	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	2480	2848	30.0	1	True	AATAAA	-15
PB.12369.6	chrX	-	3341	6	incomplete-splice_match	TMLHE	ENST00000369439.4	1248	7	-94	12198	-35	-12198	3prime_fragment	FALSE	canonical	1	147438	junction_1	8306.320798042898	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	182	1180	35.0	-20	False	NA	NA
PB.5661.1	chr19	-	2526	10	incomplete-splice_match	INSR	ENST00000302850.9	4721	22	152216	-488	1222	488	5prime_fragment	FALSE	canonical	1	111207	junction_8	29824.649447920725	NA	2	NA	TRUE	NA	NA	NA	A	coding	513	1542	68	1609	90.0	-6730	False	NA	NA
PB.6155.22	chr19	-	2012	3	full-splice_match	NUP62	ENST00000352066.7	2870	3	294	564	-2	-1	multi-exon	FALSE	canonical	1	93948	junction_2	129031.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	312	1880	5.0	0	True	NA	NA
PB.4106.1	chr15	-	6136	2	novel_not_in_catalog	LYSMD4	novel	2356	3	NA	NA	1	1231	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	C	coding	170	513	3786	4298	95.0	10	True	NA	NA
PB.115.5	chr1	-	2742	16	full-splice_match	ZBTB17	ENST00000375733.6	2770	16	27	1	-1	-1	multi-exon	FALSE	canonical	1	17516	junction_2	82333.0452247051	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	213	2645	20.0	12	False	AATAAA	-14
PB.3451.1	chr14	+	6866	2	full-splice_match	SOCS4	ENST00000395472.2	6779	2	-89	2	-89	0	multi-exon	FALSE	canonical	1	85773	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	422	1744	20.0	-468	False	ATTAAA	-19
PB.3451.2	chr14	+	6900	3	full-splice_match	SOCS4	ENST00000555846.1	4110	3	-12	-2778	6	0	multi-exon	FALSE	canonical	1	46043	junction_1	1006.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	456	1778	20.0	0	True	ATTAAA	-19
PB.12369.4	chrX	-	2662	7	novel_in_catalog	TMLHE	novel	2832	8	NA	NA	-4	3	no_combination_of_known_junctions	FALSE	canonical	1	1025	junction_1	72267.11419833751	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	151	1239	15.0	11	True	NA	NA
PB.3451.4	chr14	+	4207	3	full-splice_match	SOCS4	ENST00000555846.1	4110	3	-95	-2	-77	2	multi-exon	FALSE	canonical	1	46043	junction_1	1006.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	539	1861	35.0	-456	False	AATAAA	-17
PB.4106.2	chr15	-	6024	1	novel_in_catalog	LYSMD4	novel	2222	2	NA	NA	5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	170	513	3798	4310	25.0	-2	True	AATAAA	-20
PB.3451.6	chr14	+	4011	2	full-splice_match	SOCS4	ENST00000395472.2	6779	2	-10	2778	-10	2	multi-exon	FALSE	canonical	1	85773	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	343	1665	35.0	-16	True	AATAAA	-17
PB.3451.7	chr14	+	5755	2	full-splice_match	SOCS4	ENST00000395472.2	6779	2	-10	1034	-10	-1032	multi-exon	FALSE	canonical	1	85773	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	343	1665	25.0	-16	True	AATAAA	-17
PB.3451.8	chr14	+	3151	3	full-splice_match	SOCS4	ENST00000555846.1	4110	3	-24	983	-6	-983	multi-exon	FALSE	canonical	1	46043	junction_1	1006.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	468	1790	5.0	-12	True	AATAAA	-15
PB.2128.6	chr11	+	5378	3	novel_in_catalog	TPCN2	novel	4622	15	NA	NA	82995	0	no_combination_of_known_junctions	FALSE	canonical	1	4594	junction_1	2502.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	642	1034	5.0	0	True	NA	NA
PB.7316.2	chr20	+	2517	12	novel_in_catalog	DNTTIP1	novel	1290	13	NA	NA	32	-16	intron_retention	FALSE	canonical	1	223241	junction_1	146388.69346891923	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	37	597	40.0	15	True	ATTAAA	-12
PB.10704.5	chr7	+	1849	5	novel_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	0	-5753	combination_of_known_junctions	FALSE	canonical	1	26010	junction_1	32882.197906884205	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	106	768	30.0	0	True	NA	NA
PB.850.1	chr1	-	3927	8	full-splice_match	PEX19	ENST00000368072.9	3661	8	0	-266	0	266	multi-exon	FALSE	canonical	1	459830	junction_6	108256.63218840456	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	23	922	30.0	-14	True	NA	NA
PB.10777.5	chr7	+	2163	8	full-splice_match	DUS4L	ENST00000265720.7	2220	8	10	47	10	-47	multi-exon	FALSE	canonical	1	32843	junction_1	32180.07718056218	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	353	1306	25.0	-20	True	AATAAA	-14
PB.661.5	chr1	+	2632	10	full-splice_match	SRGAP2C	ENST00000367123.7	7204	10	213	4359	212	497	multi-exon	FALSE	canonical	0	0	junction_1	118681.22751937718	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	645	2024	20.0	NA	False	NA	NA
PB.30.1	chr1	-	3416	12	novel_in_catalog	NADK	novel	3235	12	NA	NA	-51	-7	intron_retention	FALSE	canonical	1	7379	junction_11	274864.9965510191	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	777	1751	50.0	8570	False	AATAAA	-13
PB.30.2	chr1	-	3456	12	novel_in_catalog	NADK	novel	3235	12	NA	NA	-4	-7	intron_retention	FALSE	canonical	1	38856	junction_8	243041.76626788155	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	817	1791	50.0	24	True	AATAAA	-13
PB.7526.10	chr21	+	1831	9	full-splice_match	BACE2	ENST00000330333.10	2993	9	384	778	384	195	multi-exon	FALSE	canonical	1	334894	junction_1	86095.72165246874	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	80	1636	80.0	-4	True	NA	NA
PB.6040.1	chr19	-	900	3	full-splice_match	ZNF428	ENST00000300811.7	1412	3	273	239	-2	170	multi-exon	FALSE	canonical	1	471439	junction_2	273453.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	188	567	175	741	10.0	-1	True	AATAAA	-14
PB.2128.4	chr11	+	5440	2	novel_in_catalog	TPCN2	novel	4622	15	NA	NA	83025	-2	intron_retention	FALSE	canonical	1	4594	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	130	393	612	1004	10.0	3	True	NA	NA
PB.30.6	chr1	-	3243	12	novel_not_in_catalog	NADK	novel	3235	12	NA	NA	-4	-7	any annotated donor/acceptor	FALSE	canonical	1	3835	junction_9	251902.1740571014	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	499	1578	50.0	24	True	AATAAA	-13
PB.30.7	chr1	-	3135	12	full-splice_match	NADK	ENST00000341991.7	3098	12	-44	7	-44	-7	multi-exon	FALSE	canonical	1	7379	junction_11	216683.9410003	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	130	1470	50.0	8577	False	AATAAA	-13
PB.30.8	chr1	-	3032	11	novel_in_catalog	NADK	novel	3235	12	NA	NA	-12	-7	combination_of_known_junctions	FALSE	canonical	1	57879	junction_2	250262.86586739155	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	185	1144	50.0	16	True	AATAAA	-13
PB.30.9	chr1	-	3030	11	novel_in_catalog	NADK	novel	3235	12	NA	NA	23	-7	combination_of_known_junctions	FALSE	canonical	1	57879	junction_2	264350.7094490953	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	183	1142	50.0	-16	True	AATAAA	-13
PB.7808.5	chr22	+	2735	11	full-splice_match	XPNPEP3	ENST00000428799.1	2737	11	-36	38	-2	-38	multi-exon	FALSE	canonical	1	19523	junction_3	26097.98842746314	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	417	1703	60.0	-3	True	NA	NA
PB.8830.1	chr4	-	1966	2	incomplete-splice_match	CXCL10	ENST00000306602.2	1176	4	1	-3	1	3	intron_retention	FALSE	canonical	1	288557	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-19
PB.10539.1	chr7	-	2923	8	full-splice_match	HUS1	ENST00000258774.9	2935	8	-54	66	-44	-66	multi-exon	FALSE	canonical	1	197711	junction_7	33621.734397832115	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	79	921	35.0	51	False	AATACA	-18
PB.10539.2	chr7	-	2211	9	novel_in_catalog	HUS1	novel	2935	8	NA	NA	2	-65	combination_of_known_junctions	FALSE	canonical	1	107685	junction_1	55437.373628801855	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	33	875	35.0	-23	True	AATACA	-19
PB.10539.3	chr7	-	2396	9	full-splice_match	HUS1	ENST00000458191.5	1304	9	-62	-1030	-62	-2	multi-exon	FALSE	canonical	1	29547	junction_8	86368.50555459654	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	218	997	20.0	-1	True	AAGAAA	-16
PB.5508.21	chr18	-	3746	2	incomplete-splice_match	BCL2	ENST00000333681.4	3209	3	-304	189089	38	-2322	3prime_fragment	FALSE	canonical	1	122770	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	1204	1821	40.0	-36	True	AGTAAA	-23
PB.11130.2	chr8	+	1575	5	full-splice_match	RGS20	ENST00000276500.4	1664	5	122	-33	115	4	multi-exon	FALSE	canonical	1	20492	junction_1	20758.919853884498	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	1	726	25.0	0	True	AATAAA	-25
PB.6343.1	chr2	-	2762	4	novel_not_in_catalog	LINC01822	novel	2098	3	NA	NA	-7	28174	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	83.73105092430698	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-10
PB.2779.1	chr12	+	2129	1	novel_in_catalog	PPP1R12A-AS1	novel	3234	3	NA	NA	422	-5261	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-26	False	NA	NA
PB.256.1	chr1	+	1962	12	novel_in_catalog	LCK	novel	2137	11	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	1	27379	junction_7	135242.95290248998	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	138	1514	15.0	-59	False	NA	NA
PB.256.3	chr1	+	2092	13	full-splice_match	LCK	ENST00000336890.9	2117	13	26	-1	1	1	multi-exon	FALSE	canonical	1	247229	junction_1	81331.66858286028	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	113	1642	10.0	0	True	NA	NA
PB.256.2	chr1	+	2264	12	novel_in_catalog	LCK	novel	2137	11	NA	NA	0	1	intron_retention	FALSE	canonical	1	247229	junction_1	84908.15893346808	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	114	1817	15.0	-1	True	NA	NA
PB.256.5	chr1	+	1986	12	incomplete-splice_match	LCK	ENST00000619559.4	2099	13	211	0	190	0	5prime_fragment	FALSE	canonical	1	313571	junction_5	70745.98718883152	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	9	1538	15.0	-5760	False	NA	NA
PB.256.4	chr1	+	2129	13	novel_not_in_catalog	LCK	novel	2137	11	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	153993.57010296098	NA	6	3	TRUE	NA	NA	NA	C	coding	228	687	112	798	15.0	1	True	NA	NA
PB.11020.8	chr8	+	2480	13	full-splice_match	PPP3CC	ENST00000289963.12	2135	13	-46	-299	-5	299	multi-exon	FALSE	canonical	1	128861	junction_12	62944.32907251367	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	333	1841	80.0	0	True	TTTAAA	-12
PB.11020.9	chr8	+	2097	13	novel_in_catalog	PPP3CC	novel	1598	8	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	3366	junction_3	92810.91824521958	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	812	1759	25.0	0	True	AATAAA	-36
PB.682.1	chr1	-	3928	7	novel_not_in_catalog	RBM8A	novel	565	4	NA	NA	-6	-12	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	28	552	55.0	8854	False	AATAAA	-7
PB.7916.8	chr3	+	2271	14	novel_in_catalog	SETD5	novel	1824	10	NA	NA	6	-60	combination_of_known_junctions	FALSE	canonical	1	80905	junction_4	141902.2809621062	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1122	1149	2270	65.0	6	True	NA	NA
PB.7916.9	chr3	+	2214	14	novel_in_catalog	SETD5	novel	1824	10	NA	NA	6	-60	combination_of_known_junctions	FALSE	canonical	1	80905	junction_4	134592.41847178034	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1122	1092	2213	65.0	6	True	NA	NA
PB.7916.6	chr3	+	2426	3	full-splice_match	SETD5	ENST00000463180.5	685	3	-235	-1506	6	-1045	multi-exon	FALSE	canonical	1	139805	junction_1	12901.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	1244	1645	20.0	6	True	AATAAA	-17
PB.7916.7	chr3	+	5005	23	full-splice_match	SETD5	ENST00000402198.5	6827	23	128	1694	-9	1	multi-exon	FALSE	canonical	1	54385	junction_3	144379.5055628475	NA	0	NA	TRUE	NA	NA	NA	C	coding	1442	4329	308	4636	90.0	-16	True	TTTAAA	-5
PB.7916.4	chr3	+	5666	25	novel_not_in_catalog	SETD5	novel	1824	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	7871	junction_2	164660.39843753984	NA	1	NA	TRUE	NA	NA	NA	C	coding	1449	4350	950	5299	95.0	0	True	TTTAAA	-3
PB.7916.5	chr3	+	5882	25	novel_in_catalog	SETD5	novel	1824	10	NA	NA	6	0	intron_retention	FALSE	canonical	1	51135	junction_4	161746.23166432464	NA	3	1	TRUE	NA	NA	NA	C	coding	1331	3996	1519	5514	95.0	6	True	TTTAAA	-4
PB.7916.2	chr3	+	5563	25	novel_in_catalog	SETD5	novel	1824	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	35323	junction_19	167791.83249565	NA	2	NA	TRUE	NA	NA	NA	C	coding	733	2202	1103	3304	95.0	-5	True	TTTAAA	-4
PB.7916.3	chr3	+	1997	13	incomplete-splice_match	SETD5	ENST00000402198.5	6827	23	-106	32482	-2	-60	3prime_fragment	FALSE	canonical	1	54385	junction_3	140355.87615264417	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1455	542	1996	65.0	-2	True	NA	NA
PB.11020.6	chr8	+	2341	15	novel_not_in_catalog	PPP3CC	novel	1598	8	NA	NA	-22	-1	any annotated donor/acceptor	FALSE	canonical	1	27033	junction_8	95715.67018638898	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	350	1327	30.0	-210	False	AATAAA	-37
PB.7916.1	chr3	+	5048	23	novel_in_catalog	SETD5	novel	1824	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	54385	junction_3	151791.97197342347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1461	4386	295	4680	95.0	-3	True	TTTAAA	-4
PB.10142.18	chr6	-	1729	1	genic	SEC63	novel	NA	NA	NA	NA	-11	-1888	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	155	468	192	659	65.0	7	True	TTTAAA	-26
PB.8655.2	chr4	+	2100	8	novel_in_catalog	MAEA	novel	2222	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5279	junction_6	300885.2983691525	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	24	1133	15.0	-3	True	AATAAA	-44
PB.3878.26	chr15	-	2368	17	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	2	6729	any annotated donor/acceptor	FALSE	canonical	1	1718	junction_1	68548.66657959032	NA	1	NA	TRUE	NA	NA	NA	B	coding	750	2253	73	2325	60.0	1	True	AATAAA	-11
PB.10142.16	chr6	-	1773	16	novel_not_in_catalog	SEC63	novel	6411	21	NA	NA	-19	1	any annotated donor/acceptor	FALSE	canonical	1	5306	junction_1	212145.32522407052	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1572	200	1771	70.0	-1	True	AGTAAA	-24
PB.3878.25	chr15	-	1923	7	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	16890	-3102	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	127826.56622212335	NA	1	NA	TRUE	NA	NA	NA	B	coding	228	684	1240	1923	55.0	-4	True	NA	NA
PB.3878.22	chr15	-	3188	23	incomplete-splice_match	MYO5A	ENST00000553916.5	5989	41	-47	53781	-8	0	3prime_fragment	FALSE	canonical	1	53553	junction_22	49713.759160911286	NA	0	NA	TRUE	NA	NA	NA	B	coding	1035	3105	83	3187	55.0	-9	True	AAGAAA	-16
PB.3878.23	chr15	-	3162	22	incomplete-splice_match	MYO5A	ENST00000553916.5	5989	41	-79	56883	-40	-3102	3prime_fragment	FALSE	canonical	1	53553	junction_21	50272.15069013199	NA	0	NA	TRUE	NA	NA	NA	B	coding	1016	3048	115	3162	55.0	-41	True	NA	NA
PB.3878.20	chr15	-	4591	8	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	16859	10261	any annotated donor/acceptor	FALSE	canonical	1	2648	junction_7	98875.9024072961	NA	1	NA	TRUE	NA	NA	NA	B	coding	384	1155	389	1543	95.0	-4	True	AATATA	-10
PB.3878.21	chr15	-	3260	24	incomplete-splice_match	MYO5A	ENST00000553916.5	5989	41	-41	51375	-2	2406	3prime_fragment	FALSE	canonical	1	53553	junction_23	48928.27283310746	NA	0	NA	TRUE	NA	NA	NA	B	coding	1061	3183	77	3259	60.0	-3	True	NA	NA
PB.10818.14	chr7	-	3157	4	novel_in_catalog	ZNF800	novel	1478	2	NA	NA	-27	1101	intron_retention	FALSE	canonical	1	13176	junction_2	74193.67811493255	NA	3	NA	TRUE	NA	NA	NA	C	coding	633	1902	745	2646	55.0	-4	True	AATAAA	-14
PB.10818.15	chr7	-	2760	5	incomplete-splice_match	ZNF800	ENST00000265827.7	4203	6	-27	2997	-3	632	3prime_fragment	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	721	2718	60.0	-18	True	NA	NA
PB.10818.16	chr7	-	1628	5	incomplete-splice_match	ZNF800	ENST00000265827.7	4203	6	375	3727	47	-98	3prime_fragment	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1308	319	1626	70.0	-1	True	ATTAAA	-16
PB.10818.17	chr7	-	1923	4	novel_in_catalog	ZNF800	novel	4358	6	NA	NA	8	-98	intron_retention	FALSE	canonical	1	13176	junction_2	74193.67811493255	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1212	710	1921	70.0	-7	True	ATTAAA	-16
PB.10818.10	chr7	-	5506	5	novel_in_catalog	ZNF800	novel	1478	2	NA	NA	4	-244	intron_retention	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	714	2711	40.0	-11	True	TATAAA	-28
PB.10818.11	chr7	-	2818	6	full-splice_match	ZNF800	ENST00000265827.7	4203	6	-30	1415	-6	-114	multi-exon	FALSE	canonical	1	76656	junction_5	38787.44007742712	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	724	2718	65.0	17	False	ACTAAA	-24
PB.10818.12	chr7	-	3531	5	incomplete-splice_match	ZNF800	ENST00000265827.7	4203	6	-19	2218	5	-917	3prime_fragment	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	713	2710	60.0	-10	True	AGTAAA	-13
PB.10818.13	chr7	-	3221	5	incomplete-splice_match	ZNF800	ENST00000265827.7	4203	6	-19	2528	5	1101	3prime_fragment	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	713	2710	55.0	-10	True	AATAAA	-14
PB.5139.1	chr17	+	3378	1	novel_in_catalog	TSPOAP1-AS1	novel	2042	5	NA	NA	-12	-11132	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	103	312	75	386	75.0	0	True	NA	NA
PB.6635.11	chr2	+	3466	1	novel_in_catalog	NCAPH	novel	2763	18	NA	NA	5894	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-22
PB.5139.2	chr17	+	1439	1	novel_in_catalog	TSPOAP1-AS1	novel	2042	5	NA	NA	1815	-11132	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-5481	False	NA	NA
PB.10818.18	chr7	-	1890	5	incomplete-splice_match	ZNF800	ENST00000265827.7	4203	6	-24	3864	0	-235	3prime_fragment	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-15	True	NA	NA
PB.10818.19	chr7	-	1482	5	incomplete-splice_match	ZNF800	ENST00000619291.4	2099	6	-30	649	-6	33	3prime_fragment	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	759	724	1482	60.0	17	False	NA	NA
PB.1225.5	chr1	+	3047	9	novel_in_catalog	LGALS8	novel	799	5	NA	NA	-20	3	intron_retention	FALSE	canonical	1	311421	junction_2	81064.34186766398	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	220	819	25.0	-36	True	ATTAAA	-23
PB.1225.4	chr1	+	3976	11	incomplete-splice_match	LGALS8	ENST00000450372.6	6281	12	507	2143	-23	-172	5prime_fragment	FALSE	canonical	1	151905	junction_7	125769.63749844396	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	223	1299	75.0	-39	True	NA	NA
PB.1225.7	chr1	+	3980	10	full-splice_match	LGALS8	ENST00000366584.8	4369	10	371	18	1	-18	multi-exon	FALSE	canonical	1	231979	junction_7	95754.1312843717	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	199	1149	90.0	-15	True	NA	NA
PB.1225.6	chr1	+	2190	10	novel_not_in_catalog	LGALS8	novel	799	5	NA	NA	-12	2	intron_retention	FALSE	canonical	1	2888	junction_9	188806.63114204933	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	212	811	5.0	-28	True	NA	NA
PB.1225.1	chr1	+	4167	11	incomplete-splice_match	LGALS8	ENST00000450372.6	6281	12	470	1989	36	-18	5prime_fragment	FALSE	canonical	1	151905	junction_7	125769.63749844396	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	260	1336	90.0	0	True	NA	NA
PB.1225.3	chr1	+	3673	10	full-splice_match	LGALS8	ENST00000366584.8	4369	10	334	362	-36	-362	multi-exon	FALSE	canonical	1	231979	junction_7	95754.1312843717	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	236	1186	45.0	-52	True	AATAAA	-6
PB.5414.10	chr18	-	1230	4	incomplete-splice_match	ESCO1	ENST00000269214.9	4523	12	1	45270	1	18492	3prime_fragment	FALSE	canonical	1	60717	junction_3	36131.61408271463	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	AATAAA	-39
PB.6445.22	chr2	-	4211	15	full-splice_match	PREPL	ENST00000409272.5	3030	15	0	-1181	0	620	multi-exon	FALSE	canonical	1	3327	junction_14	204793.98175469876	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	318	2501	30.0	-1	True	AATAAA	-22
PB.1225.9	chr1	+	4586	9	novel_in_catalog	LGALS8	novel	799	5	NA	NA	-3	-172	intron_retention	FALSE	canonical	1	311421	junction_2	81064.34186766398	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	187	786	75.0	-3	True	NA	NA
PB.1225.8	chr1	+	2374	11	incomplete-splice_match	LGALS8	ENST00000450372.6	6281	12	537	3715	7	3	5prime_fragment	FALSE	canonical	1	151905	junction_7	125769.63749844396	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	193	1269	25.0	-9	True	ATTAAA	-23
PB.8818.7	chr4	-	2834	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	117	3043	-14	-22	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	5	NA	TRUE	NA	NA	NA	C	coding	337	1014	179	1192	65.0	-8	True	NA	NA
PB.1215.7	chr1	+	2523	2	full-splice_match	GGPS1	ENST00000489692.1	506	2	-20	-1997	0	1442	multi-exon	FALSE	canonical	1	1112	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-16
PB.8565.1	chr3	-	3246	24	full-splice_match	CLCN2	ENST00000265593.8	3290	24	0	44	0	1	multi-exon	TRUE	canonical	1	37453	junction_23	17519.612567467855	NA	0	NA	TRUE	NA	NA	NA	A	coding	898	2697	173	2869	70.0	5111	False	AATAAA	-11
PB.7777.24	chr22	-	1660	11	incomplete-splice_match	DDX17	ENST00000403230.1	2322	13	-17	6057	8	1426	3prime_fragment	FALSE	canonical	1	1614191	junction_10	653917.846159661	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	330	1553	70.0	7	True	GATAAA	-7
PB.7777.25	chr22	-	2693	10	incomplete-splice_match	DDX17	ENST00000403230.1	2322	13	-25	6626	0	857	3prime_fragment	FALSE	canonical	1	1614191	junction_9	624372.7383571886	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	338	1687	85.0	-1	True	NA	NA
PB.7777.22	chr22	-	3379	12	novel_in_catalog	DDX17	novel	4791	13	NA	NA	0	-579	combination_of_known_junctions	FALSE	canonical	1	21118	junction_1	967131.9374142262	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	338	1624	10.0	-1	True	AATAAA	-20
PB.7777.23	chr22	-	2262	11	incomplete-splice_match	DDX17	ENST00000403230.1	2322	13	-27	5465	-2	-1030	3prime_fragment	FALSE	canonical	1	1614191	junction_10	653917.846159661	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	340	1563	60.0	-3	True	NA	NA
PB.7777.20	chr22	-	6265	12	novel_in_catalog	DDX17	novel	4791	13	NA	NA	1	-2	intron_retention	FALSE	canonical	1	587996	junction_1	849076.4218522802	NA	3	1	TRUE	NA	NA	NA	C	coding	407	1224	312	1535	0.0	-1	True	NA	NA
PB.7777.21	chr22	-	2312	13	full-splice_match	DDX17	ENST00000403230.1	2322	13	1	9	1	-9	multi-exon	FALSE	canonical	1	1050274	junction_1	827883.5128735403	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	312	2264	15.0	-1	True	NA	NA
PB.6445.21	chr2	-	4373	15	full-splice_match	PREPL	ENST00000409936.5	5212	15	-41	880	11	620	multi-exon	FALSE	canonical	1	15460	junction_14	202788.7788815883	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	480	2663	30.0	269	False	AATAAA	-22
PB.10471.1	chr7	-	6225	9	novel_not_in_catalog	GARS-DT	novel	4034	9	NA	NA	-8	-871	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	36582.51384520171	NA	3	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-15	True	NA	NA
PB.11044.8	chr8	+	3711	10	novel_in_catalog	PPP2R2A	novel	3940	10	NA	NA	60	-6	combination_of_known_junctions	FALSE	canonical	1	1645	junction_1	228414.3063071527	NA	3	NA	TRUE	NA	NA	NA	C	coding	288	867	584	1450	40.0	-1784	False	AATAAA	-13
PB.45.5	chr1	-	2283	16	novel_not_in_catalog	CEP104	novel	6424	22	NA	NA	-12	349	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	89722.17054490428	NA	2	NA	TRUE	NA	NA	NA	C	coding	691	2073	210	2282	80.0	-16	True	NA	NA
PB.3439.2	chr14	+	4586	12	full-splice_match	STYX	ENST00000442123.6	4554	12	-31	-1	-31	1	multi-exon	FALSE	canonical	1	11612	junction_1	71483.06493634848	NA	5	NA	TRUE	NA	NA	NA	C	coding	223	672	79	750	30.0	-36	False	ATTAAA	-12
PB.3439.3	chr14	+	3789	11	full-splice_match	STYX	ENST00000354586.4	4857	11	-9	1077	-7	-415	multi-exon	FALSE	canonical	1	162847	junction_4	39202.49371098731	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	303	974	40.0	-12	True	ATTAAA	-16
PB.3439.1	chr14	+	2658	11	full-splice_match	STYX	ENST00000354586.4	4857	11	-37	2236	-35	-1574	multi-exon	FALSE	canonical	1	162847	junction_4	39202.49371098731	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	331	1002	25.0	-40	False	ATTAAA	-18
PB.3439.6	chr14	+	2903	9	novel_in_catalog	STYX	novel	4554	12	NA	NA	-12	-3154	intron_retention	FALSE	canonical	1	162847	junction_4	42111.096269087735	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	308	727	45.0	-17	True	AATACA	-23
PB.3439.7	chr14	+	4840	11	full-splice_match	STYX	ENST00000354586.4	4857	11	4	13	4	-13	multi-exon	FALSE	canonical	1	162847	junction_4	39202.49371098731	NA	4	NA	TRUE	NA	NA	NA	C	coding	223	672	290	961	50.0	1	True	ATTAAA	-23
PB.3439.4	chr14	+	3554	12	full-splice_match	STYX	ENST00000442123.6	4554	12	-17	1017	-17	-412	multi-exon	FALSE	canonical	1	11612	junction_1	71483.06493634848	NA	4	NA	TRUE	NA	NA	NA	C	coding	223	672	65	736	40.0	-22	True	ATTAAA	-19
PB.3439.5	chr14	+	1909	11	full-splice_match	STYX	ENST00000354586.4	4857	11	-16	2964	-14	-2302	multi-exon	FALSE	canonical	1	162847	junction_4	39202.49371098731	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	310	981	50.0	-19	True	AATAAA	-36
PB.48.1	chr1	-	4974	30	novel_in_catalog	NPHP4	novel	3967	3	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	20331.494544986555	NA	0	NA	TRUE	NA	NA	NA	A	coding	1425	4278	243	4520	5.0	-23	True	ACTAAA	-13
PB.3439.8	chr14	+	3887	11	full-splice_match	STYX	ENST00000354586.4	4857	11	3	967	3	-305	multi-exon	FALSE	canonical	1	162847	junction_4	39202.49371098731	NA	3	NA	TRUE	NA	NA	NA	C	coding	223	672	291	962	20.0	0	True	NA	NA
PB.3439.9	chr14	+	4633	11	full-splice_match	STYX	ENST00000354586.4	4857	11	4	220	4	-163	multi-exon	FALSE	canonical	1	162847	junction_4	39202.49371098731	NA	3	NA	TRUE	NA	NA	NA	C	coding	223	672	290	961	65.0	1	True	NA	NA
PB.45.8	chr1	-	3473	2	incomplete-splice_match	CEP104	ENST00000378223.3	1121	7	-11	6177	-11	-6177	3prime_fragment	FALSE	canonical	1	83984	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	1531	1839	95.0	-15	True	NA	NA
PB.9284.2	chr5	+	2297	6	novel_in_catalog	MAP1B	novel	580	4	NA	NA	-32	-15	combination_of_known_junctions	FALSE	canonical	1	70	junction_1	205972.08220669132	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2052	246	2297	70.0	-8511	False	AAAAAG	-22
PB.9284.3	chr5	+	2513	5	incomplete-splice_match	MAP1B	ENST00000296755.11	12036	7	-31	14031	-31	99	3prime_fragment	FALSE	canonical	1	462120	junction_3	32687.01938461199	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2184	330	2513	65.0	-8510	False	NA	NA
PB.9284.4	chr5	+	2128	5	incomplete-splice_match	MAP1B	ENST00000296755.11	12036	7	246	14139	3	-9	3prime_fragment	FALSE	canonical	1	462120	junction_3	32687.01938461199	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2076	53	2128	70.0	3	True	AAAAAG	-30
PB.9284.5	chr5	+	9332	7	full-splice_match	MAP1B	ENST00000296755.11	12036	7	159	2545	-84	-2545	multi-exon	TRUE	canonical	1	462120	junction_3	117700.15560123767	NA	1	NA	TRUE	NA	NA	NA	C	coding	2468	7407	140	7546	85.0	-8320	False	NA	NA
PB.10573.10	chr7	+	2207	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27089	2773	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	174516.30800173248	NA	0	NA	TRUE	NA	NA	NA	B	coding	49	150	407	556	45.0	0	True	AATAAA	-9
PB.10573.11	chr7	+	1854	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27090	3710	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	1	NA	TRUE	NA	NA	NA	B	coding	148	447	113	559	80.0	1	True	NA	NA
PB.10573.12	chr7	+	2139	7	novel_not_in_catalog	AC068533.4	novel	922	12	NA	NA	27098	2286	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136557.02401652577	NA	1	NA	TRUE	NA	NA	NA	B	coding	148	447	105	551	25.0	9	True	AATAAA	-19
PB.7221.1	chr20	+	2259	1	antisense	novelGene_FRG1EP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	123	372	1	372	40.0	NA	False	AATAAA	-16
PB.6444.4	chr2	+	2426	6	full-splice_match	PPM1B	ENST00000282412.8	2606	6	171	9	138	-8	multi-exon	FALSE	canonical	1	282867	junction_1	183240.76779647046	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	242	1681	35.0	173	False	AATAAA	-14
PB.1534.22	chr10	+	5859	1	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	43734	-13949	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	AAGAAA	-43
PB.1534.21	chr10	+	2963	4	incomplete-splice_match	PCGF5	ENST00000336126.5	7018	10	40536	3351	40536	-3349	5prime_fragment	FALSE	canonical	1	174893	junction_2	113241.28852538235	NA	0	NA	TRUE	NA	NA	NA	C	coding	96	291	9	299	30.0	NA	False	AATAAA	-22
PB.1534.20	chr10	+	2672	10	novel_not_in_catalog	PCGF5	novel	7037	10	NA	NA	16	-4317	any annotated donor/acceptor	FALSE	canonical	1	1490	junction_1	159833.38232425	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	266	976	40.0	-6685	False	ATTAAA	-19
PB.433.8	chr1	-	3710	10	novel_not_in_catalog	DHCR24	novel	4309	9	NA	NA	23	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	608660.2252139987	NA	6	NA	TRUE	NA	NA	NA	C	coding	516	1551	130	1680	10.0	-19	False	AATAAA	-11
PB.10474.14	chr7	+	2692	17	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	4	152	any annotated donor/acceptor	FALSE	canonical	1	76	junction_2	111441.32598604228	NA	1	1	TRUE	NA	NA	NA	C	coding	434	1305	937	2241	15.0	21	True	TATAAA	-16
PB.7887.11	chr22	+	3450	25	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	5009	junction_2	159950.42420890724	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	363	3308	15.0	-7	True	AATAAA	-31
PB.7887.10	chr22	+	3577	26	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	7553	junction_3	170354.68755067937	NA	2	NA	TRUE	NA	NA	NA	C	coding	981	2946	489	3434	15.0	-7	True	AATAAA	-32
PB.7887.13	chr22	+	3397	24	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	15233	junction_2	166639.9006965696	NA	1	NA	TRUE	NA	NA	NA	C	coding	932	2799	456	3254	15.0	-6	True	AATAAA	-32
PB.7887.12	chr22	+	3445	24	novel_in_catalog	PPP6R2	novel	4035	23	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	35261	junction_2	164826.5248249319	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	504	3302	15.0	-6	True	AATAAA	-32
PB.7887.15	chr22	+	3352	24	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	17162	junction_3	146814.99382266562	NA	2	NA	TRUE	NA	NA	NA	C	coding	797	2394	816	3209	15.0	-4	True	AATAAA	-32
PB.7887.14	chr22	+	3525	25	novel_in_catalog	PPP6R2	novel	4035	23	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	35261	junction_2	156370.04867655883	NA	2	1	TRUE	NA	NA	NA	C	coding	959	2880	503	3382	15.0	-5	True	AATAAA	-32
PB.7887.16	chr22	+	3394	24	full-splice_match	PPP6R2	ENST00000612753.4	4104	24	9	701	3	-1	multi-exon	FALSE	canonical	1	186250	junction_1	123820.22563266476	NA	2	NA	TRUE	NA	NA	NA	C	coding	959	2880	373	3252	15.0	-1	True	AATAAA	-31
PB.5806.1	chr19	+	2791	1	full-splice_match	AC008764.8	ENST00000623966.1	2717	1	-74	0	-74	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-14
PB.8505.13	chr3	+	2479	16	full-splice_match	NMD3	ENST00000351193.6	3049	16	21	549	3	-246	multi-exon	FALSE	canonical	1	91003	junction_7	126840.47368547453	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	120	1631	45.0	0	True	ATTAAA	-12
PB.8505.12	chr3	+	2728	16	full-splice_match	NMD3	ENST00000351193.6	3049	16	20	301	2	2	multi-exon	FALSE	canonical	1	91003	junction_7	126840.47368547453	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	121	1632	20.0	-1	True	AATAAA	-16
PB.8505.11	chr3	+	3469	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	2	125	combination_of_known_junctions	FALSE	canonical	1	37981	junction_1	147941.57282002317	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	436	1947	25.0	-1	True	AATATA	-17
PB.8505.10	chr3	+	4421	16	full-splice_match	NMD3	ENST00000351193.6	3049	16	20	-1392	2	167	multi-exon	FALSE	canonical	1	91003	junction_7	126840.47368547453	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	121	1632	60.0	-1	True	NA	NA
PB.8505.17	chr3	+	2648	15	novel_in_catalog	NMD3	novel	589	6	NA	NA	-4	13	no_combination_of_known_junctions	FALSE	canonical	1	1375	junction_4	158007.51529945387	NA	3	NA	TRUE	NA	NA	NA	C	coding	476	1431	111	1541	25.0	9	True	AATAAA	-27
PB.8505.16	chr3	+	2908	15	novel_in_catalog	NMD3	novel	589	6	NA	NA	7	-3	no_combination_of_known_junctions	FALSE	canonical	1	11828	junction_11	156330.55477802182	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	116	1138	25.0	4	True	AATAAA	-29
PB.7926.1	chr3	-	2021	1	antisense	novelGene_IL17RC_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	104	315	25	339	85.0	119	False	NA	NA
PB.8505.14	chr3	+	3152	16	novel_in_catalog	NMD3	novel	589	6	NA	NA	-58	-3	combination_of_known_junctions	FALSE	canonical	1	37981	junction_1	147941.57282002317	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	247	1758	25.0	-491	False	AATAAA	-29
PB.11631.12	chr9	-	5289	27	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	256	-41	any annotated donor/acceptor	FALSE	canonical	1	1204	junction_26	87355.45250305395	NA	17	NA	TRUE	NA	NA	NA	C	coding	1495	4488	125	4612	60.0	345	False	TATAAA	-38
PB.11631.13	chr9	-	7933	26	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-1	9978	-1	-9978	3prime_fragment	FALSE	canonical	1	143907	junction_20	72849.29159792839	NA	2	NA	TRUE	NA	NA	NA	C	coding	1493	4482	175	4656	75.0	-4	True	NA	NA
PB.11631.10	chr9	-	5644	27	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	379	-1	any annotated donor/acceptor	FALSE	canonical	1	6788	junction_26	86787.08089294535	NA	4	NA	TRUE	NA	NA	NA	C	coding	1495	4488	216	4703	30.0	468	False	AATAAA	-18
PB.11631.11	chr9	-	5437	27	full-splice_match	TUT7	ENST00000375963.7	5379	27	-89	31	-47	-31	multi-exon	FALSE	canonical	1	143907	junction_21	73877.33315343689	NA	2	NA	TRUE	NA	NA	NA	C	coding	1495	4488	263	4750	65.0	-2	True	ACTAAA	-8
PB.11631.16	chr9	-	4284	26	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	-26	-13584	any annotated donor/acceptor	FALSE	canonical	1	11101	junction_25	86324.8491414054	NA	1	NA	TRUE	NA	NA	NA	C	coding	1384	4152	132	4283	65.0	19	True	NA	NA
PB.11631.17	chr9	-	3487	13	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-65	34542	-23	1127	3prime_fragment	FALSE	canonical	1	143907	junction_7	96266.90517110344	NA	2	NA	TRUE	NA	NA	NA	C	coding	972	2919	239	3157	10.0	22	True	AATAAA	-13
PB.11631.14	chr9	-	4730	26	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-25	13205	17	-13205	3prime_fragment	FALSE	canonical	1	143907	junction_20	72849.29159792839	NA	1	NA	TRUE	NA	NA	NA	C	coding	1493	4482	199	4680	45.0	62	True	AATATA	-8
PB.11631.15	chr9	-	4327	26	incomplete-splice_match	TUT7	ENST00000375963.7	5379	27	-1	13584	-1	-13584	3prime_fragment	FALSE	canonical	1	143907	junction_20	72849.29159792839	NA	1	NA	TRUE	NA	NA	NA	C	coding	1384	4152	175	4326	65.0	-4	True	NA	NA
PB.2242.1	chr11	+	2351	1	intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	17	NA	NA	NA	NA	NA	A	coding	479	1440	772	2211	75.0	NA	False	NA	NA
PB.5527.5	chr18	-	3529	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	182	4021	182	328	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	109	1242	25.0	-33	True	AATAAA	-37
PB.5527.6	chr18	-	3170	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	205	4357	205	-8	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	86	1219	55.0	-10	True	AATAAA	-12
PB.5527.7	chr18	-	2606	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	186	4940	186	-591	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	105	1238	20.0	-29	True	ATTAAA	-19
PB.5527.1	chr18	-	5315	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	210	2207	210	2142	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	81	1214	20.0	-5	True	NA	NA
PB.5527.2	chr18	-	5024	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	202	2506	202	1843	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	89	1222	25.0	-13	True	AATACA	-14
PB.5527.3	chr18	-	4892	2	full-splice_match	ZADH2	ENST00000322342.3	7732	2	197	2643	197	1706	multi-exon	FALSE	canonical	1	155672	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	94	1227	45.0	-18	True	ATTAAA	-20
PB.7885.11	chr22	-	6253	36	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	14	0	intron_retention	FALSE	canonical	1	419	junction_18	434496.31888840045	NA	1	NA	TRUE	NA	NA	NA	C	coding	1825	5478	51	5528	5.0	-9	True	AATACA	-18
PB.7885.10	chr22	-	6379	38	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	-19	0	intron_retention	FALSE	canonical	1	107	junction_37	457674.9812206546	NA	5	NA	TRUE	NA	NA	NA	C	coding	1747	5244	411	5654	5.0	-1	True	AATACA	-18
PB.10808.17	chr7	-	2134	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	24	350	-2	-350	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	2	NA	TRUE	NA	NA	NA	C	coding	227	684	191	874	65.0	-3	True	NA	NA
PB.6362.1	chr2	+	2092	16	novel_not_in_catalog	HADHB	novel	557	8	NA	NA	50	-1	any annotated donor/acceptor	FALSE	canonical	1	90	junction_1	439005.8763512043	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	158	1582	25.0	-1748	False	AATAAA	-15
PB.9503.3	chr5	+	2568	13	novel_in_catalog	HARS2	novel	2510	13	NA	NA	1	-1	intron_retention	FALSE	canonical	1	17113	junction_1	107501.10185753136	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	572	1816	20.0	-4	True	AATAAA	-12
PB.4381.1	chr16	+	1622	10	full-splice_match	PHKG2	ENST00000563588.5	5539	10	104	3813	-28	-2	multi-exon	FALSE	canonical	1	297813	junction_3	51135.715290263746	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	136	1356	15.0	-312	False	AATAAA	-21
PB.6864.12	chr2	+	3044	20	novel_not_in_catalog	AGPS	novel	7764	20	NA	NA	270	1017	any annotated donor/acceptor	FALSE	canonical	1	5500	junction_1	106747.4328968193	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	98	1804	25.0	-2561	False	ATTAAA	-18
PB.7235.1	chr20	-	2517	9	full-splice_match	COMMD7	ENST00000278980.10	1900	9	511	-1128	-31	1128	multi-exon	FALSE	canonical	1	358055	junction_8	136910.71705289363	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	96	698	15.0	-32	True	NA	NA
PB.7235.2	chr20	-	1921	8	incomplete-splice_match	FO393400.1	ENST00000642630.1	4410	12	68	70509	68	-70509	3prime_fragment	FALSE	canonical	1	358055	junction_7	146277.8504998523	NA	0	NA	TRUE	NA	NA	NA	A	coding	242	729	65	793	15.0	-1	True	AATAAA	-24
PB.7235.3	chr20	-	1370	9	full-splice_match	COMMD7	ENST00000278980.10	1900	9	516	14	-26	-2	multi-exon	FALSE	canonical	1	358055	junction_8	136910.71705289363	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	91	693	35.0	-27	True	AATAAA	-11
PB.2206.7	chr11	-	3627	20	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-13	12	combination_of_known_junctions	FALSE	canonical	1	27119	junction_8	443639.2287884816	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	331	2253	20.0	-36	True	AATAAA	-30
PB.8809.4	chr4	-	1285	4	full-splice_match	JCHAIN	ENST00000543780.5	1406	4	123	-2	18	-1	multi-exon	FALSE	canonical	1	4596252	junction_3	47334.14410573219	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	19	498	35.0	-1	True	ATTAAA	-16
PB.2206.6	chr11	-	3699	21	novel_in_catalog	PICALM	novel	3474	20	NA	NA	-25	12	combination_of_known_junctions	FALSE	canonical	1	382910	junction_9	393851.4145773251	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	343	2325	20.0	737	False	AATAAA	-30
PB.8809.2	chr4	-	1828	4	full-splice_match	JCHAIN	ENST00000543780.5	1406	4	68	-490	-37	487	multi-exon	FALSE	canonical	1	4596252	junction_3	47334.14410573219	NA	3	NA	TRUE	NA	NA	NA	C	coding	159	480	74	553	25.0	0	True	ATTAAA	-27
PB.8809.3	chr4	-	1482	4	full-splice_match	JCHAIN	ENST00000543780.5	1406	4	123	-199	18	196	multi-exon	FALSE	canonical	1	4596252	junction_3	47334.14410573219	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	19	498	35.0	-1	True	AATAAA	-21
PB.8809.1	chr4	-	3957	4	full-splice_match	JCHAIN	ENST00000543780.5	1406	4	103	-2654	-2	2651	multi-exon	FALSE	canonical	1	4596252	junction_3	47334.14410573219	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	39	518	75.0	443	False	NA	NA
PB.652.1	chr1	-	2870	7	novel_not_in_catalog	WARS2	novel	2811	6	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	2299	junction_6	78437.29534404464	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	167	1177	15.0	-4	True	ACTAAA	-18
PB.652.3	chr1	-	2837	6	full-splice_match	WARS2	ENST00000369426.9	2811	6	-28	2	-5	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	64926.310905826154	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	33	695	15.0	-27	False	ACTAAA	-18
PB.652.2	chr1	-	2803	6	full-splice_match	WARS2	ENST00000235521.4	2800	6	0	-3	0	-2	multi-exon	FALSE	canonical	1	140746	junction_5	14033.307840990305	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	28	1110	15.0	-22	True	ACTAAA	-18
PB.652.5	chr1	-	1298	6	full-splice_match	WARS2	ENST00000235521.4	2800	6	10	1492	-7	584	multi-exon	FALSE	canonical	1	140746	junction_5	14033.307840990305	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	18	1100	75.0	-12	True	NA	NA
PB.6016.1	chr19	-	2070	7	full-splice_match	TGFB1	ENST00000221930.5	2769	7	107	592	107	-592	multi-exon	FALSE	canonical	1	1272936	junction_4	199310.9589390965	NA	0	NA	TRUE	NA	NA	NA	A	coding	390	1173	761	1933	15.0	8565	False	ATTAAA	-13
PB.10474.13	chr7	+	2365	16	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	0	5	any annotated donor/acceptor	FALSE	canonical	1	5634	junction_1	90339.64640464094	NA	1	1	TRUE	NA	NA	NA	C	coding	430	1293	808	2100	25.0	17	True	ATTAAA	-23
PB.2057.9	chr11	+	2778	16	incomplete-splice_match	SCYL1	ENST00000420247.6	2583	18	8	1	8	-1	intron_retention	FALSE	canonical	1	354184	junction_13	190385.08352489755	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2226	62	2287	10.0	-5	True	AATAAA	-12
PB.2057.8	chr11	+	2651	18	novel_not_in_catalog	SCYL1	novel	2642	18	NA	NA	6	3	intron_retention	FALSE	canonical	1	13389	junction_1	217191.9224454655	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	513	2510	10.0	-7	True	AATAAA	-16
PB.4059.3	chr15	-	2097	6	incomplete-splice_match	DET1	ENST00000557842.6	2722	9	1	18043	1	0	3prime_fragment	FALSE	canonical	1	18742	junction_4	21054.9916608865	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	823	1629	35.0	20	True	AATAAA	-21
PB.4059.2	chr15	-	2276	5	full-splice_match	DET1	ENST00000268148.12	2267	5	-8	-1	-8	1	multi-exon	FALSE	canonical	1	34576	junction_4	15151.655165360648	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	155	1807	30.0	-19	True	AATAAA	-22
PB.7918.4	chr3	+	4383	12	novel_in_catalog	BRPF1	novel	4304	13	NA	NA	4	0	intron_retention	FALSE	canonical	1	26964	junction_8	74699.37121655549	NA	1	NA	TRUE	NA	NA	NA	C	coding	1152	3459	401	3859	95.0	14	True	NA	NA
PB.4059.4	chr15	-	2203	7	novel_in_catalog	AC013489.1	novel	3269	10	NA	NA	-96	-52767	intron_retention	FALSE	canonical	1	15597	junction_6	25341.261987890204	NA	0	NA	TRUE	NA	NA	NA	A	coding	268	807	930	1736	30.0	-17	True	AATAAA	-20
PB.7918.6	chr3	+	4578	14	novel_in_catalog	BRPF1	novel	4304	13	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	74671	junction_6	60281.238773134624	NA	1	NA	TRUE	NA	NA	NA	C	coding	1219	3660	396	4055	90.0	19	True	NA	NA
PB.2057.1	chr11	+	2728	17	incomplete-splice_match	SCYL1	ENST00000420247.6	2583	18	-29	1	-21	-1	intron_retention	FALSE	canonical	1	354184	junction_13	184379.0022245174	NA	1	NA	TRUE	NA	NA	NA	C	coding	758	2277	99	2375	10.0	-7682	False	AATAAA	-12
PB.6939.1	chr2	+	1460	7	novel_in_catalog	NIF3L1	novel	749	4	NA	NA	17	0	no_combination_of_known_junctions	FALSE	canonical	1	16152	junction_1	147822.60740232604	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	156	1208	30.0	-29	True	AATAAA	-20
PB.2057.3	chr11	+	2751	17	full-splice_match	SCYL1	ENST00000524944.5	2715	17	-37	1	-1	-1	multi-exon	FALSE	canonical	1	365587	junction_1	161731.449000136	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	71	2398	10.0	-14	True	AATAAA	-12
PB.2057.2	chr11	+	2838	16	incomplete-splice_match	SCYL1	ENST00000270176.9	2642	18	6	2	-2	1	intron_retention	FALSE	canonical	1	365587	junction_1	167035.51537461195	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	72	2348	10.0	-15	True	AATAAA	-11
PB.2057.5	chr11	+	2598	18	full-splice_match	SCYL1	ENST00000533862.5	2570	18	-28	0	-1	0	multi-exon	FALSE	canonical	1	7872	junction_15	227496.8988769816	NA	1	NA	TRUE	NA	NA	NA	C	coding	787	2364	71	2434	5.0	-14	True	AATAAA	-13
PB.2057.4	chr11	+	2622	18	full-splice_match	SCYL1	ENST00000270176.9	2642	18	21	-1	13	1	multi-exon	FALSE	canonical	1	365587	junction_1	156920.92432625053	NA	19	1	TRUE	NA	NA	NA	C	coding	808	2427	57	2483	5.0	0	True	AATAAA	-14
PB.2057.7	chr11	+	2578	18	full-splice_match	SCYL1	ENST00000420247.6	2583	18	5	0	5	0	multi-exon	FALSE	canonical	1	354184	junction_13	178971.79618350146	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	65	2440	5.0	-8	True	AATAAA	-13
PB.2057.6	chr11	+	2530	17	novel_in_catalog	SCYL1	novel	2642	18	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	1	45527	junction_16	247450.50903361684	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	66	2360	10.0	-9	True	AATAAA	-19
PB.9302.1	chr5	+	3561	2	full-splice_match	F2R	ENST00000319211.4	3821	2	247	13	91	-13	multi-exon	FALSE	canonical	1	296475	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	19	1296	35.0	105	False	AATAAA	-18
PB.8932.8	chr4	-	3151	1	novel_in_catalog	AC126283.2	novel	2385	15	NA	NA	71902	-13031	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-28	True	NA	NA
PB.9302.3	chr5	+	3443	2	full-splice_match	F2R	ENST00000319211.4	3821	2	70	308	70	-308	multi-exon	FALSE	canonical	1	296475	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	196	1473	85.0	-22	True	NA	NA
PB.9302.2	chr5	+	3108	2	full-splice_match	F2R	ENST00000319211.4	3821	2	60	653	60	-653	multi-exon	FALSE	canonical	1	296475	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	206	1483	50.0	-32	True	NA	NA
PB.9302.4	chr5	+	2690	2	full-splice_match	F2R	ENST00000319211.4	3821	2	92	1039	-64	-1039	multi-exon	FALSE	canonical	1	296475	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	174	1451	40.0	0	True	AATAAA	-17
PB.8932.1	chr4	-	5251	4	full-splice_match	PLA2G12A	ENST00000243501.9	5226	4	-27	2	-27	-2	multi-exon	FALSE	canonical	1	3586	junction_3	44323.57087249276	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	341	865	20.0	-35	True	AATAAA	-11
PB.8932.3	chr4	-	4092	3	full-splice_match	PLA2G12A	ENST00000507961.1	755	3	-152	-3185	-31	-1088	multi-exon	FALSE	canonical	1	15368	junction_2	47695.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	3447	3842	100.0	-39	False	AATAAA	-15
PB.8932.2	chr4	-	4160	4	full-splice_match	PLA2G12A	ENST00000243501.9	5226	4	-22	1088	-22	-1088	multi-exon	FALSE	canonical	1	3586	junction_3	44323.57087249276	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	336	860	100.0	-30	True	AATAAA	-15
PB.11278.2	chr8	-	3608	5	novel_in_catalog	ZNF706	novel	782	4	NA	NA	-21	2539	combination_of_known_junctions	FALSE	canonical	1	14642	junction_1	90913.56882638586	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	272	502	70.0	-31	True	NA	NA
PB.8932.4	chr4	-	3854	5	novel_not_in_catalog	PLA2G12A	novel	5226	4	NA	NA	8	-1088	any annotated donor/acceptor	FALSE	canonical	1	215	junction_4	44490.17031533483	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	3	554	100.0	0	True	AATAAA	-15
PB.8932.6	chr4	-	2839	4	full-splice_match	PLA2G12A	ENST00000243501.9	5226	4	8	2379	8	1549	multi-exon	FALSE	canonical	1	3586	junction_3	44323.57087249276	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	261	830	60.0	0	True	TATAAA	-23
PB.9010.3	chr4	+	1901	7	full-splice_match	SMAD1	ENST00000302085.8	1966	7	61	4	-18	-4	multi-exon	FALSE	canonical	1	37143	junction_1	69369.76081938649	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	363	1760	90.0	0	True	NA	NA
PB.9010.2	chr4	+	3093	7	full-splice_match	SMAD1	ENST00000302085.8	1966	7	-36	-1091	-36	1091	multi-exon	FALSE	canonical	1	37143	junction_1	69369.76081938649	NA	3	NA	TRUE	NA	NA	NA	C	coding	465	1398	460	1857	30.0	-8521	False	AATAAA	-25
PB.8418.6	chr3	+	1705	14	novel_in_catalog	PCCB	novel	1833	15	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	1502	junction_8	202159.48195934566	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	25	984	15.0	0	True	ATTAAA	-14
PB.3757.10	chr15	-	4804	21	novel_in_catalog	GOLGA8A	novel	6233	23	NA	NA	2693	0	intron_retention	FALSE	canonical	1	490	junction_16	101713.5096992897	NA	2	NA	TRUE	NA	NA	NA	B	coding	603	1812	653	2464	20.0	NA	False	AATAAA	-16
PB.3757.15	chr15	-	5753	18	novel_in_catalog	GOLGA8A	novel	6233	23	NA	NA	8499	-1	intron_retention	FALSE	canonical	1	490	junction_15	92468.86644419325	NA	2	NA	TRUE	NA	NA	NA	B	coding	460	1383	2032	3414	15.0	NA	False	AATAAA	-15
PB.9795.1	chr6	+	2111	1	full-splice_match	HIST1H2BH	ENST00000619466.2	2060	1	-51	0	-51	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	126	381	52	432	20.0	0	True	AATAAA	-17
PB.8093.2	chr3	-	2056	11	novel_in_catalog	UQCRC1	novel	955	6	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	1564577	junction_10	508135.4441564178	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	26	1249	15.0	0	True	AATAAA	-14
PB.8093.1	chr3	-	2168	11	novel_in_catalog	UQCRC1	novel	955	6	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	1564577	junction_10	554748.2582825205	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	26	1249	15.0	0	True	AATAAA	-14
PB.8093.4	chr3	-	1726	12	novel_in_catalog	UQCRC1	novel	955	6	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	1564577	junction_11	528995.4346653603	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	26	1249	15.0	0	True	AATAAA	-14
PB.3982.1	chr15	+	1704	7	full-splice_match	MPI	ENST00000535694.5	1523	7	-28	-153	7	2	multi-exon	FALSE	canonical	1	20843	junction_1	159872.26244689504	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	83	1204	25.0	-38	False	ATTAAA	-19
PB.7914.17	chr3	+	2411	10	full-splice_match	THUMPD3	ENST00000515662.6	2390	10	-24	3	22	-3	multi-exon	FALSE	canonical	1	7377	junction_1	130762.06839348789	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	709	2232	25.0	15	True	TTTAAA	-15
PB.3982.3	chr15	+	1797	8	full-splice_match	MPI	ENST00000352410.8	5828	8	40	3991	1	0	multi-exon	FALSE	canonical	1	355105	junction_6	53714.715083390285	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	28	1299	20.0	-5	True	ATTAAA	-17
PB.3982.2	chr15	+	2774	6	full-splice_match	MPI	ENST00000563422.5	1481	6	5	-1298	1	0	multi-exon	FALSE	canonical	1	405538	junction_1	40199.2627822949	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	28	1047	20.0	-5	True	ATTAAA	-17
PB.3982.5	chr15	+	1586	7	full-splice_match	MPI	ENST00000566377.5	2809	7	10	1213	-3	0	multi-exon	FALSE	canonical	1	92453	junction_6	144939.82392329813	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	26	889	20.0	-3	True	ATTAAA	-17
PB.3982.4	chr15	+	3001	8	full-splice_match	MPI	ENST00000352410.8	5828	8	41	2786	2	-8	multi-exon	FALSE	canonical	1	355105	junction_6	53714.715083390285	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	27	1298	50.0	-4	True	AATAAA	-11
PB.3982.7	chr15	+	3105	8	novel_in_catalog	MPI	novel	969	7	NA	NA	3	-8	combination_of_known_junctions	FALSE	canonical	1	26748	junction_1	156920.20715130403	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	143	1402	50.0	4	True	AATAAA	-11
PB.3982.6	chr15	+	2482	7	novel_in_catalog	MPI	novel	969	7	NA	NA	-3	2	intron_retention	FALSE	canonical	1	405538	junction_1	42747.90311978926	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	26	1045	25.0	-3	True	ATTAAA	-19
PB.5044.1	chr17	-	4285	28	full-splice_match	EFTUD2	ENST00000426333.6	4548	28	256	7	-3	-7	multi-exon	TRUE	canonical	1	683139	junction_18	169319.23842899717	NA	3	NA	TRUE	NA	NA	NA	C	coding	972	2919	43	2961	20.0	-4	True	NA	NA
PB.5044.2	chr17	-	3789	28	full-splice_match	EFTUD2	ENST00000426333.6	4548	28	232	527	1	340	multi-exon	FALSE	canonical	1	683139	junction_18	169319.23842899717	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2919	67	2985	40.0	-28	True	AAAAAG	-18
PB.5044.3	chr17	-	3438	28	full-splice_match	EFTUD2	ENST00000426333.6	4548	28	243	867	12	0	multi-exon	FALSE	canonical	1	683139	junction_18	169319.23842899717	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2919	56	2974	10.0	-17	True	AATATA	-37
PB.5044.4	chr17	-	3326	27	full-splice_match	EFTUD2	ENST00000402521.7	3045	27	29	-310	-13	0	multi-exon	FALSE	canonical	1	7112	junction_26	239346.74630849488	NA	1	NA	TRUE	NA	NA	NA	C	coding	937	2814	49	2862	10.0	-14	True	AATATA	-37
PB.8643.5	chr4	+	3234	4	novel_not_in_catalog	ZNF141	novel	536	2	NA	NA	-20	2170	any annotated donor/acceptor	FALSE	canonical	1	6515	junction_3	28660.459793163747	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-20	True	AATAAA	-26
PB.2599.1	chr12	+	2136	3	full-splice_match	BCDIN3D-AS1	ENST00000548872.5	3078	3	1	941	1	-2	multi-exon	TRUE	canonical	1	3767	junction_1	2566.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.2768.1	chr12	-	2030	7	novel_not_in_catalog	AC078923.1	novel	748	5	NA	NA	-142404	887	any annotated donor/acceptor	FALSE	canonical	1	518	junction_6	3098.4160290201326	NA	2	NA	TRUE	NA	NA	NA	B	coding	145	438	1414	1851	85.0	5	False	NA	NA
PB.8632.6	chr3	-	1680	7	full-splice_match	MELTF	ENST00000296351.8	1650	7	-31	1	-6	-1	multi-exon	FALSE	canonical	1	43930	junction_1	40583.57570666844	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	121	1029	25.0	-37	True	CATAAA	-17
PB.5145.1	chr17	-	2577	3	full-splice_match	SKA2	ENST00000581068.5	595	3	33	-2015	-21	10	multi-exon	FALSE	canonical	1	82925	junction_2	90295.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	25	False	AATAAA	-33
PB.5145.2	chr17	-	2676	4	full-splice_match	SKA2	ENST00000330137.11	2798	4	68	54	-7	-54	multi-exon	FALSE	canonical	1	21986	junction_2	118072.00266598155	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	39	404	15.0	-16	True	ATTAAA	-14
PB.5145.3	chr17	-	2780	4	full-splice_match	SKA2	ENST00000583380.5	583	4	-66	-2131	8	-9	multi-exon	FALSE	canonical	1	15867	junction_1	30272.4283172365	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	78	407	35.0	0	True	AATAAA	-14
PB.5145.4	chr17	-	2545	4	full-splice_match	SKA2	ENST00000330137.11	2798	4	29	224	8	-224	multi-exon	FALSE	canonical	1	21986	junction_2	118072.00266598155	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	78	443	20.0	0	True	AATACA	-17
PB.5145.5	chr17	-	2657	4	full-splice_match	SKA2	ENST00000583976.1	570	4	1	-2088	1	-223	multi-exon	FALSE	canonical	1	21986	junction_2	122426.72318030351	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	9	True	AATACA	-18
PB.5145.6	chr17	-	1914	4	full-splice_match	SKA2	ENST00000330137.11	2798	4	51	833	-24	-833	multi-exon	FALSE	canonical	1	21986	junction_2	118072.00266598155	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	56	421	10.0	22	False	NA	NA
PB.8632.1	chr3	-	2716	13	novel_not_in_catalog	MELTF	novel	806	2	NA	NA	5	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	45071.98797687428	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	110	1960	20.0	-26	True	AATAAA	-42
PB.8521.1	chr3	-	2124	1	antisense	novelGene_FNDC3B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	AATATA	-45
PB.11882.1	chr9	+	3145	7	novel_in_catalog	STKLD1	novel	2825	18	NA	NA	0	-9	intron_retention	FALSE	canonical	1	3899	junction_4	4748.663861784937	NA	1	NA	TRUE	NA	NA	NA	A	coding	120	363	180	542	35.0	1	True	NA	NA
PB.930.2	chr1	+	2348	10	full-splice_match	FMO4	ENST00000367749.3	2252	10	-81	-15	-55	15	multi-exon	FALSE	canonical	1	20296	junction_7	6456.2314773317175	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	412	2088	35.0	-6	True	AATATA	-30
PB.682.8	chr1	-	2798	6	full-splice_match	RBM8A	ENST00000583313.6	4961	6	65	2098	-11	1988	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	46	570	10.0	8836	False	AATAAA	-17
PB.682.9	chr1	-	2649	6	full-splice_match	RBM8A	ENST00000583313.6	4961	6	69	2243	-7	1843	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	42	566	60.0	8840	False	NA	NA
PB.682.6	chr1	-	4011	6	full-splice_match	RBM8A	ENST00000583313.6	4961	6	83	867	-6	-791	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	28	552	75.0	8854	False	NA	NA
PB.682.7	chr1	-	3522	6	full-splice_match	RBM8A	ENST00000583313.6	4961	6	54	1385	13	-1309	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	57	581	90.0	1	True	NA	NA
PB.682.4	chr1	-	3622	7	novel_not_in_catalog	RBM8A	novel	565	4	NA	NA	-13	-12	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	48	572	55.0	8834	False	AATAAA	-7
PB.682.5	chr1	-	4221	6	full-splice_match	RBM8A	ENST00000583313.6	4961	6	82	658	6	-582	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	29	553	5.0	8853	False	NA	NA
PB.682.2	chr1	-	3737	7	novel_not_in_catalog	RBM8A	novel	565	4	NA	NA	5	-12	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	30	554	55.0	8852	False	AATAAA	-7
PB.682.3	chr1	-	3637	7	novel_not_in_catalog	RBM8A	novel	565	4	NA	NA	-15	-12	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	50	574	55.0	8832	False	AATAAA	-7
PB.7952.2	chr3	+	6531	15	full-splice_match	SLC6A6	ENST00000622186.4	6528	15	-2	-1	-2	1	multi-exon	FALSE	canonical	1	81725	junction_1	68328.68552561334	NA	2	NA	TRUE	NA	NA	NA	C	coding	620	1863	328	2190	10.0	-47	True	AATAAA	-21
PB.664.10	chr1	-	3540	5	novel_not_in_catalog	NBPF15	novel	4272	19	NA	NA	6	-559	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.10696.10	chr7	+	1779	12	full-splice_match	ARPC1B	ENST00000451682.5	1715	12	-61	-3	-6	3	multi-exon	FALSE	canonical	1	4812	junction_1	1468608.7771817718	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	371	1489	100.0	-61	False	AATAAA	-13
PB.11500.5	chr9	-	3854	4	novel_in_catalog	B4GALT1	novel	1535	3	NA	NA	28	-8	no_combination_of_known_junctions	FALSE	canonical	1	4581	junction_2	458372.7103615814	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	160	819	15.0	-3	True	AATAAA	-15
PB.664.11	chr1	-	5086	5	novel_not_in_catalog	NBPF15	novel	4272	19	NA	NA	-41	-3637	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	B	coding	114	345	1796	2140	30.0	-47	False	AATAAA	-15
PB.6990.2	chr2	-	8178	45	full-splice_match	FN1	ENST00000443816.5	7762	45	5	-421	0	-1	multi-exon	TRUE	canonical	1	3539696	junction_14	2268630.7343462408	NA	0	NA	TRUE	NA	NA	NA	C	coding	2265	6798	267	7064	35.0	-1	True	AATAAA	-33
PB.8199.10	chr3	+	3202	6	full-splice_match	RPP14	ENST00000445193.7	7985	6	280	4503	232	114	multi-exon	FALSE	canonical	1	52206	junction_1	103993.77841698032	NA	3	NA	TRUE	NA	NA	NA	C	coding	168	507	624	1130	30.0	3	True	NA	NA
PB.9390.3	chr5	+	6014	16	full-splice_match	APC	ENST00000257430.8	10701	16	-29	4716	-26	-1232	multi-exon	FALSE	canonical	1	36509	junction_1	43207.755323424164	NA	0	NA	TRUE	NA	NA	NA	C	coding	1976	5928	86	6013	75.0	-29	True	NA	NA
PB.10696.11	chr7	+	1574	11	full-splice_match	ARPC1B	ENST00000458033.6	1505	11	-3	-66	-2	2	multi-exon	FALSE	canonical	1	15188	junction_2	1313653.1898791438	NA	2	1	TRUE	NA	NA	NA	C	coding	372	1119	167	1285	95.0	-3	True	AATAAA	-12
PB.11500.4	chr9	-	3975	5	novel_in_catalog	B4GALT1	novel	1535	3	NA	NA	95	-8	no_combination_of_known_junctions	FALSE	canonical	1	20887	junction_2	394253.5216890903	NA	2	NA	TRUE	NA	NA	NA	C	coding	357	1074	93	1166	15.0	1	True	AATAAA	-15
PB.8453.2	chr3	-	3282	10	novel_in_catalog	PLSCR4	novel	3303	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	21001	junction_9	54607.23172046757	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	287	1276	15.0	-1	True	ATTAAA	-16
PB.8453.1	chr3	-	3140	9	full-splice_match	PLSCR4	ENST00000354952.6	3303	9	97	66	1	0	multi-exon	FALSE	canonical	1	65887	junction_8	37369.01027171445	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	145	1134	15.0	22	True	ATTAAA	-16
PB.6990.6	chr2	-	8796	46	full-splice_match	FN1	ENST00000354785.8	8905	46	104	5	0	-1	multi-exon	FALSE	canonical	1	2230192	junction_21	2751796.3779044435	NA	1	NA	TRUE	NA	NA	NA	C	coding	2477	7434	267	7700	45.0	-1	True	AATAAA	-15
PB.10044.19	chr6	+	4984	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	178	106	-1	0	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	1	NA	TRUE	NA	NA	NA	C	coding	1061	3186	67	3252	30.0	-4	True	ATTAAA	-17
PB.10044.18	chr6	+	4666	13	novel_in_catalog	ZNF451	novel	581	6	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	1426	junction_11	58928.33939218747	NA	1	NA	TRUE	NA	NA	NA	C	coding	955	2868	67	2934	30.0	-4	True	ATTAAA	-17
PB.223.2	chr1	+	1892	2	full-splice_match	ATP5IF1	ENST00000465645.1	1855	2	-30	-7	-9	0	multi-exon	FALSE	canonical	1	4021058	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	AATAAA	-20
PB.6990.5	chr2	-	8434	46	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2230192	junction_21	2739792.566254025	NA	0	NA	TRUE	NA	NA	NA	C	coding	2356	7071	267	7337	50.0	-1	True	AATAAA	-16
PB.6862.10	chr2	+	5234	10	full-splice_match	HNRNPA3	ENST00000435711.5	1731	10	-30	-3473	-7	-620	multi-exon	FALSE	canonical	1	811	junction_3	167523.3254032788	NA	3	NA	TRUE	NA	NA	NA	C	coding	378	1137	59	1195	25.0	-52	False	AATAAA	-12
PB.10044.11	chr6	+	4923	14	novel_in_catalog	ZNF451	novel	581	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	9831	junction_1	53519.480858145886	NA	2	NA	TRUE	NA	NA	NA	C	coding	1033	3102	90	3191	30.0	-27	True	ATTAAA	-17
PB.10044.10	chr6	+	3182	11	full-splice_match	ZNF451	ENST00000444273.6	3402	11	46	174	-10	-174	multi-exon	FALSE	canonical	1	105223	junction_1	35226.50227939186	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	96	2894	85.0	-33	True	NA	NA
PB.10044.13	chr6	+	3939	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	160	1169	1	305	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	23	2	TRUE	NA	NA	NA	C	coding	1061	3186	85	3270	20.0	-22	True	AAGAAA	-32
PB.10044.12	chr6	+	2884	4	full-splice_match	ZNF451	ENST00000370708.8	9478	4	91	6503	-2	2260	multi-exon	FALSE	canonical	1	63635	junction_3	72220.43661057597	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	88	1767	30.0	-25	True	AATAAA	-18
PB.10044.15	chr6	+	4804	14	novel_in_catalog	ZNF451	novel	581	6	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	7615	junction_12	55356.61406503799	NA	3	1	TRUE	NA	NA	NA	C	coding	975	2928	74	3001	30.0	-11	True	ATTAAA	-17
PB.10044.14	chr6	+	5177	16	novel_not_in_catalog	ZNF451	novel	581	6	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	3197	junction_4	68866.29302564015	NA	2	NA	TRUE	NA	NA	NA	C	coding	974	2925	521	3445	30.0	-21	True	ATTAAA	-17
PB.12264.1	chrX	+	1290	9	novel_in_catalog	SLC25A14	novel	1734	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	32265	junction_4	37071.81733452482	NA	0	NA	TRUE	NA	NA	NA	A	coding	154	465	95	559	10.0	-6	True	ATTAAA	-19
PB.10696.12	chr7	+	1593	11	full-splice_match	ARPC1B	ENST00000427217.6	1578	11	-36	21	-13	4	multi-exon	FALSE	canonical	1	31634	junction_2	1310417.8970616548	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	184	1302	100.0	-2	True	AATAAA	-14
PB.6894.10	chr2	+	2538	12	novel_in_catalog	GULP1	novel	2643	13	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	5875	junction_1	60808.624436297774	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	576	1490	85.0	0	True	NA	NA
PB.6894.11	chr2	+	2558	13	novel_in_catalog	GULP1	novel	2643	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83410.28602482464	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	596	1510	85.0	6	True	NA	NA
PB.4053.28	chr15	+	2475	15	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	29	-908	any annotated donor/acceptor	FALSE	canonical	1	92	junction_1	130703.08680451885	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	146	2473	70.0	-4239	False	NA	NA
PB.4053.29	chr15	+	2087	13	incomplete-splice_match	AKAP13	ENST00000560579.5	4290	30	86891	908	2776	-908	internal_fragment	FALSE	canonical	1	242279	junction_10	91986.7262537856	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1950	136	2085	70.0	-9035	False	NA	NA
PB.6894.14	chr2	+	3292	12	full-splice_match	GULP1	ENST00000359135.7	3347	12	53	2	-7	-2	multi-exon	FALSE	canonical	1	63473	junction_1	45850.54808309996	NA	2	NA	TRUE	NA	NA	NA	C	coding	304	915	460	1374	30.0	-3	True	AATAAA	-18
PB.6894.15	chr2	+	2393	12	novel_not_in_catalog	GULP1	novel	2643	13	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	1471	junction_1	61985.8255710046	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	431	1345	85.0	-3	True	NA	NA
PB.6894.16	chr2	+	2727	7	full-splice_match	GULP1	ENST00000409637.7	1242	7	-13	-1472	-6	1066	multi-exon	FALSE	canonical	1	63473	junction_1	58389.26345775299	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	459	962	80.0	-2	True	NA	NA
PB.6894.17	chr2	+	2543	13	novel_not_in_catalog	GULP1	novel	2643	13	NA	NA	-6	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	83407.43256594737	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	581	1495	85.0	-2	True	NA	NA
PB.4053.22	chr15	+	2876	19	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	-2426	-903	any annotated donor/acceptor	FALSE	canonical	1	32907	junction_4	113635.89259181665	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2811	65	2875	75.0	0	True	NA	NA
PB.4053.23	chr15	+	2834	18	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	108	-903	any annotated donor/acceptor	FALSE	canonical	1	32907	junction_3	115789.13429860063	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2751	83	2833	75.0	2534	False	NA	NA
PB.4053.20	chr15	+	7899	21	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	-2780	0	intron_retention	FALSE	canonical	1	2825	junction_1	132818.8416295952	NA	26	3	TRUE	NA	NA	NA	C	coding	970	2913	309	3221	10.0	-354	False	AATAAA	-15
PB.4053.27	chr15	+	2341	14	incomplete-splice_match	AKAP13	ENST00000560579.5	4290	30	83978	903	-137	-903	internal_fragment	FALSE	canonical	1	242279	junction_11	88490.56019377595	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2334	7	2340	75.0	-9792	False	NA	NA
PB.4053.25	chr15	+	2689	17	novel_not_in_catalog	AKAP13	novel	13215	37	NA	NA	-725	-903	any annotated donor/acceptor	FALSE	canonical	1	193	junction_1	128561.70141060613	NA	1	1	TRUE	NA	NA	NA	C	coding	860	2580	109	2688	75.0	-6642	False	NA	NA
PB.1170.4	chr1	+	3065	17	novel_not_in_catalog	COQ8A	novel	5523	20	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	1325	junction_2	218617.90153869742	NA	3	NA	TRUE	NA	NA	NA	C	coding	647	1944	316	2259	5.0	2	True	AATAAA	-18
PB.10803.2	chr7	-	3702	13	novel_in_catalog	CTTNBP2	novel	5970	23	NA	NA	-68	-1	combination_of_known_junctions	FALSE	canonical	1	9594	junction_12	11755.388066045856	NA	4	NA	TRUE	NA	NA	NA	C	coding	1124	3375	161	3535	30.0	146	False	AATAAA	-16
PB.6990.8	chr2	-	8390	46	full-splice_match	FN1	ENST00000354785.8	8905	46	104	411	0	0	multi-exon	FALSE	canonical	1	2230192	junction_21	2751796.3779044435	NA	27	2	TRUE	NA	NA	NA	C	coding	2477	7434	267	7700	30.0	-1	True	AATAAA	-15
PB.6382.1	chr2	-	4786	1	antisense	novelGene_C2orf16_AS_novelGene_ZNF512_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	56	171	280	450	30.0	-216	False	NA	NA
PB.1170.2	chr1	+	2862	15	full-splice_match	COQ8A	ENST00000366777.3	2872	15	10	0	4	0	multi-exon	FALSE	canonical	1	324522	junction_1	96250.15544159195	NA	1	NA	TRUE	NA	NA	NA	C	coding	647	1944	112	2055	5.0	0	True	AATAAA	-19
PB.1170.3	chr1	+	2989	14	novel_in_catalog	COQ8A	novel	5523	20	NA	NA	4	0	intron_retention	FALSE	canonical	1	324522	junction_1	99849.96709940108	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	112	1380	5.0	0	True	AATAAA	-19
PB.8718.14	chr4	-	2198	10	incomplete-splice_match	DHX15	ENST00000336812.4	2994	14	6	12372	6	-138	3prime_fragment	FALSE	canonical	1	1040316	junction_2	196478.1496269738	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	152	2104	25.0	-15	True	AATAAA	-22
PB.10219.1	chr6	-	3238	13	novel_in_catalog	SLC18B1	novel	2368	14	NA	NA	-84	0	intron_retention	FALSE	canonical	1	105350	junction_11	26957.663036875474	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	182	1270	10.0	-1	True	AATAAA	-21
PB.10696.13	chr7	+	1758	9	incomplete-splice_match	ARPC1B	ENST00000252725.10	1564	10	21	116	-11	-14	intron_retention	FALSE	canonical	1	2237353	junction_1	494454.00975063833	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	100	1257	70.0	0	True	NA	NA
PB.10219.3	chr6	-	2451	14	full-splice_match	SLC18B1	ENST00000275227.8	2368	14	-84	1	-84	-1	multi-exon	FALSE	canonical	1	105350	junction_12	26370.25579643153	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	182	1552	10.0	-1	True	AATAAA	-20
PB.10219.2	chr6	-	2548	15	novel_in_catalog	SLC18B1	novel	2368	14	NA	NA	-100	-1	combination_of_known_junctions	FALSE	canonical	1	11858	junction_13	54374.14087357883	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	498	1649	10.0	-17	True	AATAAA	-20
PB.7916.18	chr3	+	5269	24	novel_in_catalog	SETD5	novel	1824	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	80905	junction_4	150429.96074872187	NA	0	NA	TRUE	NA	NA	NA	C	coding	1331	3996	907	4902	95.0	0	True	TTTAAA	-3
PB.10007.14	chr6	+	2827	11	full-splice_match	POLH	ENST00000372236.8	3540	11	35	678	35	-678	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	261	2402	15.0	0	True	NA	NA
PB.6509.7	chr2	+	2237	8	full-splice_match	SLC1A4	ENST00000234256.3	4561	8	-32	2356	-32	115	multi-exon	FALSE	canonical	1	291415	junction_1	45436.90377987964	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	276	1874	15.0	-30	True	NA	NA
PB.10803.1	chr7	-	5992	23	full-splice_match	CTTNBP2	ENST00000160373.7	5970	23	-20	-2	-20	2	multi-exon	FALSE	canonical	1	9594	junction_22	10054.441680789476	NA	2	NA	TRUE	NA	NA	NA	C	coding	1663	4992	113	5104	15.0	-6	True	AATAAA	-20
PB.6509.1	chr2	+	3935	8	novel_in_catalog	SLC1A4	novel	766	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	8801	junction_1	131117.07027908848	NA	3	NA	TRUE	NA	NA	NA	C	coding	312	939	280	1218	20.0	-4	True	AATGAA	-18
PB.6509.3	chr2	+	2913	8	novel_in_catalog	SLC1A4	novel	766	6	NA	NA	2	-1018	combination_of_known_junctions	FALSE	canonical	1	8801	junction_1	131117.07027908848	NA	6	NA	TRUE	NA	NA	NA	C	coding	312	939	276	1214	5.0	0	True	ATTAAA	-25
PB.10007.15	chr6	+	2194	10	novel_in_catalog	POLH	novel	3540	11	NA	NA	35	-1141	no_combination_of_known_junctions	FALSE	canonical	1	7822	junction_4	66564.09291320678	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1281	913	2193	35.0	0	True	AATAAA	-23
PB.2343.1	chr11	+	4410	5	full-splice_match	SPA17	ENST00000227135.6	853	5	94	-3651	-18	794	multi-exon	FALSE	canonical	1	85764	junction_4	31829.127953024414	NA	3	NA	TRUE	NA	NA	NA	A	coding	151	456	89	544	20.0	-24	True	NA	NA
PB.7916.11	chr3	+	5452	24	novel_in_catalog	SETD5	novel	1824	10	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	80905	junction_4	143561.99081212096	NA	3	NA	TRUE	NA	NA	NA	C	coding	1331	3996	1090	5085	95.0	8	True	TTTAAA	-3
PB.7916.12	chr3	+	2137	5	novel_not_in_catalog	SETD5	novel	1824	10	NA	NA	13	-1045	any annotated donor/acceptor	FALSE	canonical	1	5697	junction_1	85415.5832810969	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	2	445	20.0	13	True	AATAAA	-17
PB.7916.13	chr3	+	2606	4	incomplete-splice_match	SETD5	ENST00000431285.5	1824	10	14	8862	14	-40	3prime_fragment	FALSE	canonical	1	139805	junction_1	24458.036202624466	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	1	366	60.0	14	True	NA	NA
PB.7916.14	chr3	+	5659	26	novel_in_catalog	SETD5	novel	1824	10	NA	NA	33	-3	combination_of_known_junctions	FALSE	canonical	1	51135	junction_4	166222.22097012182	NA	2	1	TRUE	NA	NA	NA	C	coding	1331	3996	1299	5294	85.0	33	True	TTTAAA	-1
PB.10007.16	chr6	+	3915	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	37	1139	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	63064.424333866584	NA	2	1	TRUE	NA	NA	NA	C	coding	713	2142	259	2400	25.0	2	True	AATAAA	-38
PB.7916.16	chr3	+	5527	25	novel_in_catalog	SETD5	novel	1824	10	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	51135	junction_4	153419.46645064309	NA	0	NA	TRUE	NA	NA	NA	C	coding	1449	4350	810	5159	95.0	1	True	TTTAAA	-4
PB.7916.17	chr3	+	2199	15	novel_in_catalog	SETD5	novel	1824	10	NA	NA	-3	-431	combination_of_known_junctions	FALSE	canonical	1	51135	junction_4	126514.09414974527	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1500	699	2198	25.0	-10	True	AAAAAG	-25
PB.2587.7	chr12	-	1753	4	incomplete-splice_match	TUBA1B	ENST00000547765.5	1875	5	1049	-32	-233	0	5prime_fragment	FALSE	canonical	1	30399	junction_3	4752664.586457463	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	331	1581	20.0	-1	True	AGTAAA	-13
PB.2587.6	chr12	-	3307	2	incomplete-splice_match	TUBA1B	ENST00000332858.10	3198	3	0	0	0	0	intron_retention	FALSE	canonical	1	3796674	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	298	897	2239	3135	20.0	-1	True	AGTAAA	-13
PB.2587.5	chr12	-	3610	1	novel_in_catalog	TUBA1B	novel	1627	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	341	1026	2413	3438	20.0	-1	True	AGTAAA	-13
PB.4504.9	chr16	+	3845	9	full-splice_match	NFATC3	ENST00000379165.8	3583	9	-280	18	-11	0	multi-exon	FALSE	canonical	1	95086	junction_1	55403.48533429553	NA	1	NA	TRUE	NA	NA	NA	C	coding	1045	3138	305	3442	100.0	8	True	NA	NA
PB.2587.3	chr12	-	1623	4	full-splice_match	TUBA1B	ENST00000336023.9	1627	4	0	4	0	0	multi-exon	FALSE	canonical	1	3796674	junction_1	3130717.046226773	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	96	1451	20.0	-1	True	AGTAAA	-13
PB.2587.2	chr12	-	1927	3	novel_in_catalog	TUBA1B	novel	1627	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	7252656	junction_2	2100308.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	729	1754	15.0	-1	True	AGTAAA	-14
PB.9885.3	chr6	-	1972	5	novel_in_catalog	NEU1	novel	4616	3	NA	NA	5	-158	intron_retention	FALSE	canonical	1	522532	junction_2	155498.7270213168	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	42	854	30.0	-1	True	AATGAA	-9
PB.9885.2	chr6	-	3101	3	full-splice_match	NEU1	ENST00000495807.1	4616	3	-34	1549	-8	-156	multi-exon	FALSE	canonical	1	627230	junction_2	153336.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	55	426	20.0	-14	True	AATGAA	-11
PB.3902.1	chr15	+	2941	9	full-splice_match	FAM81A	ENST00000288228.9	3465	9	-31	555	-31	-555	multi-exon	FALSE	canonical	1	17598	junction_1	21108.94987284718	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	252	1325	25.0	5	True	AATAAA	-28
PB.7211.15	chr20	+	3789	11	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-7	-16	intron_retention	FALSE	canonical	1	4310	junction_7	250224.95111129506	NA	0	NA	TRUE	NA	NA	NA	C	coding	75	228	434	661	5.0	-15	True	AATAAA	-13
PB.3902.3	chr15	+	2469	9	full-splice_match	FAM81A	ENST00000288228.9	3465	9	-9	1005	-9	-1005	multi-exon	FALSE	canonical	1	17598	junction_1	21108.94987284718	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	230	1303	20.0	-24	True	AAGAAA	-23
PB.3902.2	chr15	+	3484	9	full-splice_match	FAM81A	ENST00000288228.9	3465	9	-17	-2	-17	2	multi-exon	FALSE	canonical	1	17598	junction_1	21108.94987284718	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	238	1311	25.0	-32	True	AATAAA	-22
PB.3902.5	chr15	+	2845	9	novel_in_catalog	FAM81A	novel	573	5	NA	NA	0	-563	combination_of_known_junctions	FALSE	canonical	1	3397	junction_2	29034.224091739994	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	104	1237	40.0	13	True	AATAAA	-20
PB.3902.4	chr15	+	2695	9	full-splice_match	FAM81A	ENST00000288228.9	3465	9	5	765	5	-765	multi-exon	FALSE	canonical	1	17598	junction_1	21108.94987284718	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	216	1289	35.0	-10	True	AATAAA	-30
PB.7211.12	chr20	+	2643	14	novel_in_catalog	ENTPD6	novel	2708	14	NA	NA	-9	-14	combination_of_known_junctions	FALSE	canonical	1	66446	junction_10	226885.72969384847	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	257	1525	5.0	-17	True	AATAAA	-15
PB.2587.8	chr12	-	3500	2	incomplete-splice_match	TUBA1B	ENST00000547476.5	584	4	2	-1499	0	-1	intron_retention	FALSE	canonical	1	11453273	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	2304	3329	20.0	-1	True	AGTAAA	-12
PB.9503.1	chr5	+	2407	14	novel_not_in_catalog	HARS2	novel	2510	13	NA	NA	-5	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	132017.04853979943	NA	5	1	TRUE	NA	NA	NA	C	coding	414	1245	408	1652	20.0	-11	True	AATAAA	-15
PB.11033.1	chr8	-	3544	9	full-splice_match	TNFRSF10D	ENST00000312584.3	3538	9	-12	6	-12	-6	multi-exon	FALSE	canonical	1	169111	junction_7	34680.76990837285	NA	1	NA	TRUE	NA	NA	NA	A	coding	386	1161	108	1268	25.0	9305	False	AATAAA	-16
PB.8195.1	chr3	+	4307	22	novel_in_catalog	SLMAP	novel	556	2	NA	NA	-21	47	combination_of_known_junctions	FALSE	canonical	1	72009	junction_11	100060.9010671595	NA	1	NA	TRUE	NA	NA	NA	C	coding	787	2364	1239	3602	30.0	-456	False	AATAAA	-14
PB.7890.10	chr22	-	3115	13	novel_not_in_catalog	LMF2	novel	2582	14	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	22592	junction_7	199113.96832723924	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	646	1803	0.0	-6	True	AATAAA	-16
PB.7952.3	chr3	+	2456	15	full-splice_match	SLC6A6	ENST00000649500.1	6480	15	10	4014	10	390	multi-exon	FALSE	canonical	1	81725	junction_1	68328.68552561334	NA	4	NA	TRUE	NA	NA	NA	C	coding	620	1863	308	2170	25.0	-27	True	NA	NA
PB.2159.2	chr11	-	2532	14	full-splice_match	PGM2L1	ENST00000298198.4	8515	14	9	5974	9	-5974	multi-exon	FALSE	canonical	1	71877	junction_12	22698.53667102611	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	304	2172	85.0	-73	True	NA	NA
PB.8195.3	chr3	+	5368	22	full-splice_match	SLMAP	ENST00000295951.7	5433	22	64	1	64	0	multi-exon	FALSE	canonical	1	21033	junction_11	115299.69538468197	NA	4	1	TRUE	NA	NA	NA	C	coding	811	2436	1154	3589	30.0	-15	True	AATAAA	-18
PB.8372.6	chr3	-	2852	8	novel_in_catalog	TPRA1	novel	4235	13	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	125486	junction_7	140528.21675248232	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	344	853	30.0	-3	True	AATAAA	-14
PB.11389.1	chr8	-	4016	27	full-splice_match	OPLAH	ENST00000618853.4	4031	27	13	2	13	-2	multi-exon	FALSE	canonical	1	56516	junction_26	19300.276078788498	NA	0	NA	TRUE	NA	NA	NA	A	coding	1288	3867	92	3958	10.0	1	True	AATAAA	-44
PB.10228.28	chr6	-	3401	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	5	3857	1	26	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	249	3011	45.0	-3	True	AGTAAA	-26
PB.10228.29	chr6	-	2867	13	full-splice_match	BCLAF1	ENST00000530767.5	4186	13	-59	1378	1	17	multi-exon	FALSE	canonical	1	66665	junction_9	189752.39831063765	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	243	2486	45.0	3	True	AGTAAA	-17
PB.10228.24	chr6	-	3923	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-15	1463	0	-353	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	1	NA	TRUE	NA	NA	NA	C	coding	871	2616	247	2862	20.0	-1	True	AATAAA	-13
PB.10228.25	chr6	-	3420	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-11	1962	1	198	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	243	2858	60.0	3	True	NA	NA
PB.10228.26	chr6	-	3573	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	5	3685	1	198	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	249	3011	60.0	-3	True	NA	NA
PB.10228.27	chr6	-	2896	12	novel_in_catalog	BCLAF1	novel	7719	15	NA	NA	2	194	combination_of_known_junctions	FALSE	canonical	1	66665	junction_8	190867.98905851046	NA	1	NA	TRUE	NA	NA	NA	C	coding	698	2097	242	2338	65.0	4	True	NA	NA
PB.10228.20	chr6	-	4766	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	7	2490	0	-2	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	247	3009	25.0	-1	True	AATAAA	-30
PB.10228.21	chr6	-	4615	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-12	768	0	-3	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	244	2859	30.0	2	True	AATAAA	-29
PB.10228.22	chr6	-	4584	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	21	2658	-1	-170	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	2	NA	TRUE	NA	NA	NA	C	coding	920	2763	233	2995	40.0	13	True	ATTAAA	-18
PB.10228.23	chr6	-	4006	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	71	3186	1	-353	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	8	2	TRUE	NA	NA	NA	C	coding	920	2763	183	2945	20.0	63	True	AATAAA	-13
PB.77.4	chr1	+	5209	24	full-splice_match	PIK3CD	ENST00000377346.8	5203	24	-14	8	-1	-8	multi-exon	FALSE	canonical	1	83178	junction_1	52561.18237719229	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	210	3344	60.0	0	True	AGTAAA	-9
PB.10696.16	chr7	+	1767	12	novel_in_catalog	AC004922.1	novel	2430	17	NA	NA	48798	125	no_combination_of_known_junctions	FALSE	canonical	1	4812	junction_1	1470985.7340701453	NA	0	NA	TRUE	NA	NA	NA	B	coding	372	1119	360	1478	95.0	0	True	AATAAA	-12
PB.6718.2	chr2	+	2344	6	novel_not_in_catalog	RALB	novel	558	4	NA	NA	7	-10	any annotated donor/acceptor	FALSE	canonical	1	782	junction_2	377052.246692471	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	281	901	30.0	-9	True	AATAAA	-10
PB.8853.79	chr4	-	3371	20	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	54702	junction_1	335055.55697042093	NA	1	NA	TRUE	NA	NA	NA	C	coding	869	2610	69	2678	85.0	-10	True	TTTAAA	-4
PB.2597.1	chr12	+	2612	10	full-splice_match	TMBIM6	ENST00000267115.9	2836	10	0	224	0	-14	multi-exon	FALSE	canonical	1	995205	junction_1	1902230.279382586	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	86	799	85.0	0	True	NA	NA
PB.2597.2	chr12	+	2570	11	novel_not_in_catalog	TMBIM6	novel	469	4	NA	NA	0	-13	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	2488593.2353262235	NA	1	1	TRUE	NA	NA	NA	C	coding	237	714	96	809	90.0	-9061	False	NA	NA
PB.2597.3	chr12	+	3299	9	novel_in_catalog	TMBIM6	novel	469	4	NA	NA	4	0	intron_retention	FALSE	canonical	1	995205	junction_1	2002496.35508073	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	90	734	15.0	-4	True	AATAAA	-19
PB.2597.4	chr12	+	4391	8	novel_in_catalog	TMBIM6	novel	469	4	NA	NA	-2	1	intron_retention	FALSE	canonical	1	995205	junction_1	2098045.4977534567	NA	5	NA	TRUE	NA	NA	NA	C	coding	214	645	88	732	15.0	-2	True	AATAAA	-20
PB.2597.5	chr12	+	3072	9	novel_in_catalog	TMBIM6	novel	469	4	NA	NA	-1	-13	intron_retention	FALSE	canonical	1	995205	junction_1	2002496.35508073	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	87	731	90.0	-1	True	NA	NA
PB.2597.6	chr12	+	2997	11	full-splice_match	TMBIM6	ENST00000549385.5	2771	11	-18	-208	-1	0	multi-exon	FALSE	canonical	1	16517	junction_1	2647011.480178701	NA	1	1	TRUE	NA	NA	NA	C	coding	237	714	246	959	15.0	-1	True	AATAAA	-19
PB.2597.7	chr12	+	2968	11	novel_not_in_catalog	TMBIM6	novel	469	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	471	junction_2	2662758.2561854934	NA	5	1	TRUE	NA	NA	NA	C	coding	237	714	218	931	15.0	0	True	AATAAA	-18
PB.2597.8	chr12	+	2835	10	full-splice_match	TMBIM6	ENST00000267115.9	2836	10	2	-1	2	0	multi-exon	FALSE	canonical	1	995205	junction_1	1902230.279382586	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	84	797	15.0	2	True	AATAAA	-19
PB.2597.9	chr12	+	2771	11	full-splice_match	TMBIM6	ENST00000549385.5	2771	11	-17	17	0	-14	multi-exon	FALSE	canonical	1	16517	junction_1	2647011.480178701	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	245	958	85.0	0	True	NA	NA
PB.8853.73	chr4	-	3322	24	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	3	-60	combination_of_known_junctions	FALSE	canonical	1	83080	junction_11	301684.15316886234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3228	93	3320	70.0	-34	True	NA	NA
PB.8853.72	chr4	-	3020	22	incomplete-splice_match	SEC31A	ENST00000513858.5	3687	24	-101	5997	5	-60	3prime_fragment	FALSE	canonical	1	277702	junction_3	287548.34965060937	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2847	172	3018	70.0	0	True	NA	NA
PB.4356.1	chr16	-	2370	7	full-splice_match	HIRIP3	ENST00000279392.7	3388	7	345	673	-17	2	multi-exon	FALSE	canonical	1	229161	junction_3	38184.52032092179	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	487	2157	20.0	-1	True	AATAAA	-23
PB.8853.74	chr4	-	3278	24	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	2	-60	combination_of_known_junctions	FALSE	canonical	1	83080	junction_11	322688.38091226754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1061	3183	94	3276	70.0	-35	True	NA	NA
PB.8853.77	chr4	-	3472	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-3	-62	combination_of_known_junctions	FALSE	canonical	1	54702	junction_5	352883.89916447026	NA	2	1	TRUE	NA	NA	NA	C	coding	1133	3399	74	3472	65.0	-15	True	NA	NA
PB.4356.2	chr16	-	2445	6	novel_in_catalog	HIRIP3	novel	3388	7	NA	NA	-10	2	intron_retention	FALSE	canonical	1	229161	junction_2	38493.02389576584	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	480	2027	20.0	6	True	AATAAA	-23
PB.77.3	chr1	+	4250	25	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	non_canonical	0	0	junction_24	69032.49292920569	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	210	3344	60.0	0	True	AGTAAA	-9
PB.11806.1	chr9	+	1951	6	novel_in_catalog	CDK9	novel	702	3	NA	NA	-15	-685	intron_retention	FALSE	canonical	1	679436	junction_1	106219.00782327051	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	116	751	10.0	0	True	ATTAAA	-40
PB.2822.16	chr12	+	1880	13	incomplete-splice_match	NEDD1	ENST00000266742.8	4046	16	20	9075	5	-7568	3prime_fragment	FALSE	canonical	1	85484	junction_2	80954.27830104507	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	320	1879	60.0	-14	True	NA	NA
PB.11806.2	chr9	+	2267	5	novel_in_catalog	CDK9	novel	702	3	NA	NA	-14	-706	intron_retention	FALSE	canonical	1	679436	junction_1	118643.55843555098	NA	3	NA	TRUE	NA	NA	NA	C	coding	154	465	1265	1729	15.0	1	True	ATTAAA	-19
PB.3883.9	chr15	-	2862	8	novel_in_catalog	RAB27A	novel	3459	6	NA	NA	-12	-636	combination_of_known_junctions	FALSE	canonical	1	4634	junction_7	195436.34273291222	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	295	960	95.0	0	True	NA	NA
PB.9210.16	chr5	-	2204	10	full-splice_match	HMGCS1	ENST00000433297.2	3466	10	95	1167	56	-1167	multi-exon	FALSE	canonical	1	418002	junction_9	325268.98018971056	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	73	1635	55.0	-6	True	GATAAA	-5
PB.5411.1	chr18	-	2074	5	full-splice_match	ZNF519	ENST00000592049.5	558	5	-4	-1512	0	0	multi-exon	FALSE	canonical	1	9211	junction_3	6833.617028155733	NA	1	NA	TRUE	NA	NA	NA	A	coding	104	315	572	886	35.0	-5	True	NA	NA
PB.3883.1	chr15	-	3478	7	full-splice_match	RAB27A	ENST00000336787.5	3446	7	-32	0	-32	0	multi-exon	FALSE	canonical	1	142379	junction_6	110780.48136856059	NA	3	NA	TRUE	NA	NA	NA	C	coding	221	666	275	940	35.0	-1	True	AATAAA	-19
PB.7403.20	chr20	+	2329	31	incomplete-splice_match	COL9A3	ENST00000343916.7	2485	32	374	206	-7	-191	5prime_fragment	FALSE	canonical	1	88382	junction_1	43297.21408338211	NA	10	1	TRUE	NA	NA	NA	C	coding	497	1494	615	2108	30.0	-7	True	AATAAA	-14
PB.3883.3	chr15	-	2843	7	full-splice_match	RAB27A	ENST00000336787.5	3446	7	-32	635	-32	-635	multi-exon	FALSE	canonical	1	142379	junction_6	110780.48136856059	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	275	940	100.0	-1	True	NA	NA
PB.3883.5	chr15	-	2839	7	novel_in_catalog	RAB27A	novel	3459	6	NA	NA	-9	-635	combination_of_known_junctions	FALSE	canonical	1	424	junction_6	154110.23437209555	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	271	936	100.0	38	False	NA	NA
PB.3883.4	chr15	-	2916	8	novel_in_catalog	RAB27A	novel	3459	6	NA	NA	-16	-635	combination_of_known_junctions	FALSE	canonical	1	8887	junction_5	178488.29320783168	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	348	1013	100.0	15	True	NA	NA
PB.3883.7	chr15	-	2815	7	full-splice_match	RAB27A	ENST00000569493.5	1013	7	-53	-1749	-53	-635	multi-exon	FALSE	canonical	1	4634	junction_6	152738.42296881293	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	247	912	100.0	-41	False	NA	NA
PB.10580.4	chr7	+	3442	17	novel_not_in_catalog	TYW1	novel	495	3	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	47	junction_13	73888.97559218493	NA	4	NA	TRUE	NA	NA	NA	C	coding	577	1734	142	1875	35.0	5	True	AATAAA	-13
PB.10580.5	chr7	+	3203	16	full-splice_match	TYW1	ENST00000359626.9	3348	16	140	5	102	-3	multi-exon	FALSE	canonical	1	12355	junction_15	62646.28334266039	NA	5	NA	TRUE	NA	NA	NA	C	coding	732	2199	25	2223	35.0	83	False	AATAAA	-13
PB.10580.1	chr7	+	3638	7	incomplete-splice_match	TYW1	ENST00000359626.9	3348	16	0	212002	0	9631	3prime_fragment	FALSE	canonical	1	47706	junction_4	50902.72480918875	NA	4	NA	TRUE	NA	NA	NA	C	coding	343	1032	165	1196	30.0	-18	True	AATAAA	-16
PB.10580.2	chr7	+	3143	15	novel_in_catalog	TYW1	novel	495	3	NA	NA	0	-3	intron_retention	FALSE	canonical	1	4288	junction_4	68727.11848421159	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	160	2163	35.0	-13	True	AATAAA	-13
PB.10580.3	chr7	+	3499	17	novel_not_in_catalog	TYW1	novel	495	3	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_4	72757.61201489075	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	147	2519	35.0	0	True	AATAAA	-13
PB.10207.4	chr6	-	6072	31	novel_in_catalog	PTPRK	novel	6087	30	NA	NA	-15	-8	combination_of_known_junctions	FALSE	canonical	1	12612	junction_30	94171.99882906926	NA	0	NA	TRUE	NA	NA	NA	C	coding	1368	4107	526	4632	30.0	399	False	AATAAA	-15
PB.10207.5	chr6	-	5991	30	novel_not_in_catalog	PTPRK	novel	6087	30	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	27	junction_3	71762.1127874548	NA	2	NA	TRUE	NA	NA	NA	C	coding	1430	4293	259	4551	30.0	-37	True	AATAAA	-15
PB.10207.6	chr6	-	5901	30	full-splice_match	PTPRK	ENST00000368215.7	4651	30	-141	-1109	16	-8	multi-exon	FALSE	canonical	1	27602	junction_17	68783.25355753078	NA	1	NA	TRUE	NA	NA	NA	C	coding	1439	4320	142	4461	30.0	531	False	AATAAA	-15
PB.10207.3	chr6	-	3660	18	novel_not_in_catalog	PTPRK	novel	6087	30	NA	NA	-18041	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	83458.10265567874	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	259	2220	30.0	NA	False	AATAAA	-15
PB.11226.49	chr8	-	1796	12	incomplete-splice_match	NBN	ENST00000396252.6	4907	19	18561	20113	-2	-10090	internal_fragment	FALSE	canonical	1	46834	junction_10	186319.44434467674	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1392	403	1794	65.0	-1	True	AGTAAA	-27
PB.10207.8	chr6	-	5301	27	novel_in_catalog	PTPRK	novel	6087	30	NA	NA	-38	-8	combination_of_known_junctions	FALSE	canonical	1	7052	junction_26	74898.92019248342	NA	0	NA	TRUE	NA	NA	NA	C	coding	1109	3330	532	3861	30.0	-14	True	AATAAA	-15
PB.11226.48	chr8	-	3425	9	novel_in_catalog	NBN	novel	4666	16	NA	NA	-2	-10090	intron_retention	FALSE	canonical	1	213812	junction_8	134755.71996950632	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1185	2239	3423	65.0	-1	True	AGTAAA	-27
PB.1812.9	chr11	+	5185	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	4	-307	0	307	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	2	NA	TRUE	NA	NA	NA	C	coding	585	1758	100	1857	5.0	4	True	AGTAAA	-20
PB.1812.8	chr11	+	2001	11	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	2	-151	no_combination_of_known_junctions	FALSE	canonical	1	5577	junction_3	194157.979803664	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	102	1631	80.0	2	True	NA	NA
PB.999.12	chr1	+	1746	15	novel_not_in_catalog	ODR4	novel	1900	13	NA	NA	-12	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	88467.68913483126	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	138	1328	10.0	10	True	ATTAAA	-17
PB.12390.9	chrY	+	2939	3	novel_in_catalog	TXLNGY	novel	1000	5	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	56118	junction_1	784.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	212	634	15.0	17	True	AATAAA	-19
PB.12390.8	chrY	+	1975	3	incomplete-splice_match	TXLNGY	ENST00000459719.6	2098	4	23	570	-9	1	3prime_fragment	FALSE	canonical	1	56118	junction_1	13423.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	214	609	30.0	15	True	AATAAA	-15
PB.12390.7	chrY	+	2463	3	incomplete-splice_match	TXLNGY	ENST00000407724.7	1000	5	60	-177	-9	1	intron_retention	FALSE	canonical	1	62824	junction_1	10070.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	126	521	15.0	15	True	AATAAA	-21
PB.12390.6	chrY	+	3597	2	incomplete-splice_match	TXLNGY	ENST00000447520.5	832	4	-16	-266	16	266	intron_retention	FALSE	canonical	1	62824	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	133	555	70.0	8	True	NA	NA
PB.12390.5	chrY	+	2094	4	full-splice_match	TXLNGY	ENST00000459719.6	2098	4	8	-4	8	-1	multi-exon	FALSE	canonical	1	56118	junction_1	12302.195856386326	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	229	624	15.0	0	True	AATAAA	-19
PB.1812.2	chr11	+	2169	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	62	2651	4	-151	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	42	1799	80.0	-94	False	NA	NA
PB.1812.5	chr11	+	3614	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	98	1170	40	0	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	2	NA	TRUE	NA	NA	NA	C	coding	585	1758	6	1763	25.0	1	True	AATAAA	-19
PB.12390.2	chrY	+	1909	3	incomplete-splice_match	TXLNGY	ENST00000407724.7	1000	5	38	399	1	1	intron_retention	FALSE	canonical	1	62824	junction_1	10070.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	148	543	30.0	-7	True	AATAAA	-15
PB.1812.7	chr11	+	3533	11	full-splice_match	SWAP70	ENST00000447399.6	3538	11	4	1	0	-1	multi-exon	FALSE	canonical	1	24625	junction_2	182234.17082229664	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	100	1683	20.0	4	True	AATAAA	-18
PB.1812.6	chr11	+	1810	12	full-splice_match	SWAP70	ENST00000318950.10	4882	12	27	3045	2	-545	multi-exon	FALSE	canonical	1	283291	junction_2	134218.1324751147	NA	2	NA	TRUE	NA	NA	NA	C	coding	578	1734	77	1810	60.0	27	True	NA	NA
PB.6733.1	chr2	-	4822	9	novel_not_in_catalog	AMMECR1L	novel	4658	8	NA	NA	-34	2	any annotated donor/acceptor	FALSE	canonical	1	18080	junction_3	57440.72282348452	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	296	1363	25.0	-1589	False	AATAAA	-12
PB.11918.8	chr9	+	4441	5	full-splice_match	MAN1B1	ENST00000536349.5	5048	5	606	1	-229	-1	multi-exon	FALSE	canonical	1	488343	junction_2	74167.70786998543	NA	24	1	TRUE	NA	NA	NA	C	coding	372	1119	2734	3852	15.0	NA	False	GATAAA	-14
PB.11226.47	chr8	-	1583	10	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-82	-10090	any annotated donor/acceptor	FALSE	canonical	1	12241	junction_9	173757.14808559534	NA	2	NA	TRUE	NA	NA	NA	C	coding	464	1392	190	1581	65.0	2929	False	AGTAAA	-27
PB.4651.28	chr17	-	7039	41	novel_not_in_catalog	PRPF8	novel	380	2	NA	NA	-11	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_35	545901.4973557587	NA	4	1	TRUE	NA	NA	NA	C	coding	1833	5502	1374	6875	30.0	-27	True	AATAAA	-21
PB.8430.14	chr3	-	3448	24	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	4809	junction_21	541180.2273976691	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	688	3174	15.0	-28	True	CATAAA	-17
PB.7112.1	chr2	+	5248	13	incomplete-splice_match	FARP2	ENST00000627550.2	2122	18	-25	20534	21	-1905	3prime_fragment	FALSE	canonical	1	74353	junction_1	25126.277559006274	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	150	2537	100.0	-46	False	NA	NA
PB.4651.22	chr17	-	7279	43	full-splice_match	PRPF8	ENST00000304992.10	7295	43	12	4	12	-2	multi-exon	FALSE	canonical	1	622378	junction_42	489324.8930406542	NA	21	2	TRUE	NA	NA	NA	C	coding	2335	7008	103	7110	15.0	-34	True	AATAAA	-26
PB.2130.10	chr11	+	2652	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	69	1586	-9	1481	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	159	1046	70.0	0	True	TTTAAA	-38
PB.2130.13	chr11	+	4186	6	novel_not_in_catalog	CCND1	novel	4307	5	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	772870.4102384564	NA	2	1	TRUE	NA	NA	NA	C	coding	295	888	155	1042	5.0	4	True	AATAAA	-15
PB.2130.12	chr11	+	4161	6	novel_not_in_catalog	CCND1	novel	4307	5	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	772870.4102384564	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	84	971	5.0	2	True	AATAAA	-14
PB.2130.15	chr11	+	3968	5	novel_not_in_catalog	CCND1	novel	4307	5	NA	NA	799	-1	intron_retention	FALSE	canonical	1	2614	junction_1	842829.663469731	NA	3	1	TRUE	NA	NA	NA	C	coding	214	645	133	777	5.0	-9797	False	AATAAA	-15
PB.2130.14	chr11	+	3547	5	full-splice_match	CCND1	ENST00000227507.2	4307	5	74	686	-4	-686	multi-exon	FALSE	canonical	1	1510366	junction_4	260609.229677668	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	154	1041	25.0	5	True	NA	NA
PB.4651.25	chr17	-	7121	43	novel_not_in_catalog	PRPF8	novel	380	2	NA	NA	-2	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_42	522268.3740642062	NA	0	NA	TRUE	NA	NA	NA	C	coding	2311	6936	21	6956	30.0	-18	True	AATAAA	-22
PB.11865.1	chr9	-	1390	8	full-splice_match	MED27	ENST00000292035.9	1431	8	37	4	-5	-4	multi-exon	FALSE	canonical	1	12971	junction_3	20511.26657250018	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	28	963	15.0	-5	True	AATAAA	-16
PB.3550.1	chr14	+	2239	11	full-splice_match	ZNF410	ENST00000324593.10	2293	11	53	1	-1	-1	multi-exon	FALSE	canonical	1	106590	junction_9	113759.07948133195	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	208	1503	5.0	-1	True	AATAAA	-16
PB.10217.3	chr6	-	4027	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-54	11818	19	4029	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	169	954	55.0	-10	True	GATAAA	-37
PB.10217.2	chr6	-	4128	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-19	11682	-16	4165	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	134	919	30.0	25	True	AATACA	-18
PB.10217.1	chr6	-	4278	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-53	11566	20	4281	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	3	NA	TRUE	NA	NA	NA	C	coding	261	786	168	953	35.0	-9	True	TATAAA	-36
PB.10217.6	chr6	-	3961	10	novel_not_in_catalog	STX7	novel	15791	10	NA	NA	277	3814	any annotated donor/acceptor	FALSE	canonical	1	5932	junction_9	197892.1728579593	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	318	1103	40.0	-3	True	AATAAA	-43
PB.10217.5	chr6	-	4454	9	novel_in_catalog	STX7	novel	15791	10	NA	NA	31	3787	intron_retention	FALSE	canonical	1	436700	junction_8	93763.9999852522	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	3196	3522	55.0	2	True	AATAAA	-16
PB.10217.4	chr6	-	3733	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-3	12061	0	3786	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	23	NA	TRUE	NA	NA	NA	C	coding	261	786	118	903	55.0	41	True	AATAAA	-15
PB.11495.16	chr9	-	2329	16	incomplete-splice_match	DDX58	ENST00000379883.2	4353	18	74	10677	-42	-10677	3prime_fragment	FALSE	canonical	1	131787	junction_15	47721.27878541768	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	85	2328	70.0	-56	True	NA	NA
PB.10217.9	chr6	-	3947	10	novel_not_in_catalog	STX7	novel	15791	10	NA	NA	240	3787	any annotated donor/acceptor	FALSE	canonical	1	1248	junction_9	199251.70446342547	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	331	1116	55.0	482	False	AATAAA	-16
PB.11913.1	chr9	+	2273	11	full-splice_match	TRAF2	ENST00000247668.6	2264	11	-2	-7	-2	7	multi-exon	TRUE	canonical	1	38330	junction_1	75550.24084415614	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	55	1560	20.0	0	True	ATTAAA	-21
PB.470.4	chr1	+	2751	13	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	189211	junction_1	583930.8845690356	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	103	1557	25.0	-23	True	AATAAA	-12
PB.443.3	chr1	-	982	7	novel_not_in_catalog	TM2D1	novel	969	7	NA	NA	-11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	230497.4691765737	NA	0	NA	TRUE	NA	NA	NA	B	coding	207	624	36	659	15.0	-23	False	AATAAA	-17
PB.11265.2	chr8	-	5123	1	novel_in_catalog	AC104986.2	novel	380	2	NA	NA	16	-11143	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.9168.1	chr5	-	3649	1	genic	AC034231.1	novel	NA	NA	NA	NA	-27	-12973	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	11	36	378	413	35.0	-13	True	NA	NA
PB.172.19	chr1	-	3382	7	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-26	-19	combination_of_known_junctions	FALSE	canonical	1	93663	junction_4	298631.9726538652	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	839	1342	70.0	-29	False	NA	NA
PB.4591.1	chr16	+	5005	3	novel_in_catalog	COX4I1	novel	566	3	NA	NA	-13	-3	intron_retention	FALSE	canonical	1	5457823	junction_1	2035944.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	136	411	4470	4880	25.0	-25	True	AATAAA	-16
PB.4591.2	chr16	+	2215	3	full-splice_match	COX4I1	ENST00000568339.5	2271	3	53	3	-8	-3	multi-exon	FALSE	canonical	1	5457823	junction_1	1041409.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-20	True	AATAAA	-16
PB.4591.3	chr16	+	5867	2	incomplete-splice_match	COX4I1	ENST00000253452.6	708	5	-3	3	-2	-3	intron_retention	FALSE	canonical	1	5457823	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-14	True	AATAAA	-16
PB.116.2	chr1	-	3909	17	full-splice_match	EPHA2	ENST00000358432.7	3964	17	51	4	16	-4	multi-exon	FALSE	canonical	1	222096	junction_14	117530.084473731	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	105	3035	10.0	7	True	AATAAA	-18
PB.3550.8	chr14	+	2606	13	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34870	3	no_combination_of_known_junctions	TRUE	canonical	1	6712	junction_10	160140.48882073222	NA	0	NA	TRUE	NA	NA	NA	B	coding	430	1293	225	1517	10.0	-18	True	AATAAA	-20
PB.7592.4	chr22	-	2890	3	novel_not_in_catalog	HDHD5	novel	1735	8	NA	NA	0	-6184	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.116.1	chr1	-	4088	17	novel_not_in_catalog	EPHA2	novel	3964	17	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	canonical	1	16279	junction_1	152708.69791144377	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	138	3077	10.0	-1	True	AATAAA	-21
PB.7592.2	chr22	-	1777	8	full-splice_match	HDHD5	ENST00000336737.8	1799	8	-14	36	-14	23	multi-exon	FALSE	canonical	1	177818	junction_7	122336.73889419035	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	41	1312	70.0	-15	True	GGGGCT	-9
PB.7592.3	chr22	-	2752	8	novel_not_in_catalog	HDHD5	novel	1735	8	NA	NA	-10	-8	intron_retention	FALSE	canonical	1	10760	junction_3	181782.6588898436	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	1398	2261	25.0	11	True	AATAAA	-20
PB.3550.9	chr14	+	2484	13	novel_in_catalog	AC005520.1	novel	3695	22	NA	NA	34872	-1	no_combination_of_known_junctions	FALSE	canonical	1	2440	junction_11	168472.96883864055	NA	0	NA	TRUE	NA	NA	NA	B	coding	272	819	223	1041	5.0	-16	True	AATAAA	-16
PB.7315.9	chr20	+	2029	12	full-splice_match	PIGT	ENST00000279036.11	2245	12	211	5	-35	0	multi-exon	FALSE	canonical	1	829791	junction_1	246584.86176672	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	666	1616	0.0	-9316	False	AATAAA	-15
PB.7315.8	chr20	+	2045	11	full-splice_match	PIGT	ENST00000638246.1	2032	11	40	-53	0	1	multi-exon	FALSE	canonical	1	42198	junction_2	434980.5383589592	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	679	1629	0.0	-4	True	AATAAA	-18
PB.7315.7	chr20	+	1977	11	full-splice_match	PIGT	ENST00000372689.9	1971	11	-4	-2	0	-1	multi-exon	FALSE	canonical	1	30740	junction_8	444535.41031221574	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	25	1560	5.0	-9461	False	AATAAA	-19
PB.7315.6	chr20	+	2092	11	novel_in_catalog	PIGT	novel	2245	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	20527	junction_10	444849.6167009251	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	25	1677	0.0	-9461	False	AATAAA	-17
PB.7315.5	chr20	+	2014	11	full-splice_match	PIGT	ENST00000543458.7	2037	11	23	0	-2	0	multi-exon	FALSE	canonical	1	16529	junction_2	441601.62094634573	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	28	1596	5.0	-9464	False	AATAAA	-20
PB.7315.4	chr20	+	2264	13	novel_not_in_catalog	PIGT	novel	2245	12	NA	NA	-2	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	587233.7910885664	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	28	1848	0.0	-9464	False	AATAAA	-18
PB.7315.3	chr20	+	1878	10	full-splice_match	PIGT	ENST00000279035.14	1880	10	43	-41	0	-1	multi-exon	FALSE	canonical	1	43146	junction_1	443204.2980096451	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	31	1461	5.0	-9467	False	AATAAA	-19
PB.7315.2	chr20	+	2055	13	novel_not_in_catalog	PIGT	novel	2245	12	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	416589.4334347334	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	34	1770	5.0	-9470	False	AATAAA	-20
PB.7315.1	chr20	+	2922	11	full-splice_match	PIGT	ENST00000640364.1	2840	11	-46	-36	-7	1	multi-exon	TRUE	canonical	1	829791	junction_1	257116.6792808471	NA	4	NA	TRUE	NA	NA	NA	C	coding	371	1116	81	1196	0.0	-9517	False	AATAAA	-18
PB.1240.31	chr1	-	2852	14	full-splice_match	HNRNPU	ENST00000444376.7	6827	14	43	3932	14	-23	multi-exon	FALSE	canonical	1	1037046	junction_1	1614879.0492050434	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	211	2631	35.0	-9	True	TTTAAA	-37
PB.6478.6	chr2	+	3831	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	14	1722	intron_retention	FALSE	canonical	1	11477	junction_2	113971.12774567644	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	716	1882	70.0	-31	True	AGTAAA	-8
PB.470.8	chr1	+	6461	12	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-5	14	intron_retention	FALSE	canonical	1	189211	junction_1	569100.9624846823	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	4112	5251	35.0	-5	True	AATAAA	-28
PB.8433.13	chr3	+	4750	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	804	1268	30.0	-17	True	ATTAAA	-12
PB.391.7	chr1	-	1554	7	full-splice_match	ATPAF1	ENST00000329231.8	1241	7	63	-376	0	-2	multi-exon	FALSE	canonical	1	62386	junction_1	183690.2465142671	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	43	825	30.0	-1	True	AATAAA	-17
PB.11568.10	chr9	+	2417	3	novel_in_catalog	CR769775.1	novel	931	3	NA	NA	-4	1589	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.5633.4	chr19	-	1812	8	full-splice_match	PLIN3	ENST00000221957.8	2333	8	101	420	-4	301	multi-exon	FALSE	canonical	1	754429	junction_6	157437.6141159749	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	77	1381	80.0	-1	True	NA	NA
PB.5633.1	chr19	-	2237	8	full-splice_match	PLIN3	ENST00000221957.8	2333	8	103	-7	-2	7	multi-exon	FALSE	canonical	1	754429	junction_6	157437.6141159749	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	75	1379	10.0	1	True	AATAAA	-25
PB.5633.2	chr19	-	1989	6	novel_not_in_catalog	PLIN3	novel	2333	8	NA	NA	-292	7	intron_retention	FALSE	canonical	1	1927	junction_2	430729.60045884934	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	241	1131	10.0	7752	False	AATAAA	-25
PB.5633.3	chr19	-	1974	8	full-splice_match	PLIN3	ENST00000221957.8	2333	8	102	257	-3	-227	multi-exon	FALSE	canonical	1	754429	junction_6	157437.6141159749	NA	2	1	TRUE	NA	NA	NA	C	coding	434	1305	76	1380	95.0	0	True	NA	NA
PB.391.4	chr1	-	1996	10	novel_in_catalog	ATPAF1	novel	4158	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	19030	junction_1	179999.47055134753	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	43	972	30.0	-1	True	NA	NA
PB.7774.2	chr22	-	2693	4	novel_in_catalog	TPTEP2-CSNK1E	novel	1770	15	NA	NA	-351	-75979	intron_retention	FALSE	canonical	1	11766	junction_3	47605.00785281593	NA	0	NA	TRUE	NA	NA	NA	B	coding	118	357	196	552	30.0	41	False	AATAAA	-17
PB.5187.28	chr17	-	2686	13	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	39968	junction_2	1896528.4972545875	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	171	1421	40.0	-1	True	AATAAA	-45
PB.391.3	chr1	-	2754	10	novel_not_in_catalog	ATPAF1	novel	4158	9	NA	NA	1	-4	any annotated donor/acceptor	FALSE	canonical	1	5665	junction_1	183903.65172765174	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	42	989	30.0	0	True	NA	NA
PB.5187.26	chr17	-	2908	12	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	39968	junction_1	1914677.3696341352	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	171	1421	40.0	-1	True	AATAAA	-45
PB.5187.21	chr17	-	3350	13	novel_not_in_catalog	DDX5	novel	2225	12	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_2	1906780.6028441614	NA	10	1	TRUE	NA	NA	NA	C	coding	406	1221	197	1417	40.0	587	False	AATAAA	-45
PB.5187.20	chr17	-	3441	11	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	2737	junction_3	1996982.4067783372	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	171	1280	40.0	-1	True	AATAAA	-45
PB.5187.23	chr17	-	2400	14	novel_in_catalog	DDX5	novel	2225	12	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	1	84100	junction_13	1899499.270589548	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	255	2099	40.0	-1	True	AATAAA	-45
PB.5187.22	chr17	-	3152	14	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	61389	junction_3	2380705.810800734	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	171	1391	40.0	-1	True	AATAAA	-45
PB.391.1	chr1	-	4063	9	full-splice_match	ATPAF1	ENST00000576409.5	4158	9	91	4	1	-4	multi-exon	FALSE	canonical	1	431663	junction_8	71164.29010746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	42	1028	30.0	0	True	NA	NA
PB.5423.6	chr18	+	2071	19	novel_in_catalog	RMC1	novel	1958	18	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_10	116857.59768967728	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	495	1997	45.0	0	True	AATAAA	-15
PB.1932.21	chr11	-	3630	14	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-23	-2	intron_retention	FALSE	canonical	1	10365	junction_12	224999.67129769546	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	271	1731	85.0	-11	True	AATAAA	-4
PB.1932.20	chr11	-	3592	15	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-32	-2	intron_retention	FALSE	canonical	1	12095	junction_14	220269.02682518782	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	240	1781	85.0	9	False	AATAAA	-4
PB.1932.23	chr11	-	3616	16	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-34	-2	intron_retention	FALSE	canonical	1	5271	junction_14	257509.02365052936	NA	2	1	TRUE	NA	NA	NA	C	coding	483	1452	354	1805	85.0	7	False	AATAAA	-4
PB.1932.22	chr11	-	3633	16	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	18737	junction_15	240188.000025221	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	293	1822	85.0	-1	True	AATAAA	-4
PB.1932.25	chr11	-	3509	13	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	158176	junction_12	165864.0089056184	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	150	1610	85.0	-1	True	AATAAA	-4
PB.1932.24	chr11	-	3584	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	18737	junction_13	226114.71879266592	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	222	1685	85.0	-1	True	AATAAA	-4
PB.1932.27	chr11	-	3568	14	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	656	junction_13	228235.18751042127	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	209	1669	85.0	-6	True	AATAAA	-4
PB.1932.26	chr11	-	3581	15	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-30	-2	intron_retention	FALSE	canonical	1	12095	junction_14	236470.56744602465	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	238	1770	85.0	11	False	AATAAA	-4
PB.1932.29	chr11	-	3533	15	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	10365	junction_13	232120.5232726028	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	262	1722	85.0	-2	True	AATAAA	-4
PB.1932.28	chr11	-	3422	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	130091	junction_1	187472.62624240597	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	151	1611	85.0	-2	True	AATAAA	-4
PB.7149.2	chr20	-	5026	37	full-splice_match	C20orf194	ENST00000252032.9	6869	37	-8	1851	-8	-1851	multi-exon	FALSE	canonical	1	26383	junction_36	23469.66680632684	NA	0	NA	TRUE	NA	NA	NA	A	coding	1177	3534	77	3610	80.0	-36	True	AGTAAA	-10
PB.9466.12	chr5	+	2006	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	-2	4933	0	-204	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	297	1685	50.0	0	True	ATTAAA	-15
PB.9466.13	chr5	+	1917	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	0	5095	0	251	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	372	1760	20.0	0	True	AATACA	-21
PB.9466.10	chr5	+	3094	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	-2	3845	0	884	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	297	1685	65.0	0	True	NA	NA
PB.9466.11	chr5	+	2448	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	0	4564	0	163	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	372	1760	45.0	0	True	TTTAAA	-12
PB.9466.16	chr5	+	3864	9	novel_in_catalog	SMAD5	novel	7012	8	NA	NA	5	1502	combination_of_known_junctions	FALSE	canonical	1	9018	junction_2	125042.73698794945	NA	6	NA	TRUE	NA	NA	NA	C	coding	462	1389	449	1837	5.0	7	True	AAAAAG	-29
PB.9466.17	chr5	+	3779	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	9	3224	7	1503	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	363	1751	10.0	9	True	AAAAAG	-30
PB.3484.8	chr14	+	3978	16	novel_not_in_catalog	HIF1A	novel	559	3	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	30	junction_9	608711.67751796	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	1675	2808	15.0	-7	True	AATAAA	-16
PB.3484.9	chr14	+	3819	14	full-splice_match	HIF1A	ENST00000323441.10	3555	14	-264	0	0	0	multi-exon	FALSE	canonical	1	80990	junction_13	502880.0561650777	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	293	2500	15.0	-7	True	AATAAA	-19
PB.3484.6	chr14	+	3903	16	novel_not_in_catalog	HIF1A	novel	559	3	NA	NA	-19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	489388.26424393227	NA	2	NA	TRUE	NA	NA	NA	C	coding	826	2481	250	2730	15.0	0	True	AATAAA	-19
PB.3484.7	chr14	+	6771	1	genic	HIF1A	novel	NA	NA	NA	NA	-18	-19559	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	1	True	NA	NA
PB.3484.4	chr14	+	3687	14	novel_in_catalog	HIF1A	novel	559	3	NA	NA	-29	-1	no_combination_of_known_junctions	FALSE	canonical	1	6243	junction_9	519723.77488951595	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	322	1575	15.0	-2228	False	AATAAA	-18
PB.9466.19	chr5	+	6485	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	28	499	26	-499	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	344	1732	70.0	28	True	NA	NA
PB.3484.2	chr14	+	3898	16	novel_not_in_catalog	HIF1A	novel	559	3	NA	NA	-36	0	any annotated donor/acceptor	FALSE	canonical	1	17542	junction_6	485838.1214057301	NA	1	NA	TRUE	NA	NA	NA	C	coding	798	2397	329	2725	15.0	-2235	False	AATAAA	-19
PB.3484.3	chr14	+	3853	14	novel_in_catalog	HIF1A	novel	559	3	NA	NA	-30	0	no_combination_of_known_junctions	FALSE	canonical	1	18852	junction_10	512848.23086478136	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2358	323	2680	15.0	-2229	False	AATAAA	-19
PB.4249.10	chr16	-	1559	4	full-splice_match	LITAF	ENST00000622633.4	2467	4	31	877	0	0	multi-exon	FALSE	canonical	1	576206	junction_3	400020.3360055586	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	40	525	95.0	-1	True	NA	NA
PB.4249.11	chr16	-	1627	4	full-splice_match	LITAF	ENST00000570904.5	1118	4	-5	-504	-5	0	multi-exon	FALSE	canonical	1	80875	junction_3	613542.2465216954	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	108	593	95.0	213	False	NA	NA
PB.10235.26	chr6	+	3849	9	full-splice_match	TNFAIP3	ENST00000612899.4	4735	9	172	714	38	-151	multi-exon	FALSE	canonical	1	73954	junction_1	220346.79284223626	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	199	2571	10.0	-9864	False	AATAAA	-29
PB.10235.27	chr6	+	3897	9	full-splice_match	TNFAIP3	ENST00000237289.8	4432	9	-186	721	44	-157	multi-exon	FALSE	canonical	1	126053	junction_1	205414.7679330773	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	253	2625	20.0	-1	True	AATAAA	-23
PB.10235.24	chr6	+	4169	9	full-splice_match	TNFAIP3	ENST00000237289.8	4432	9	-186	449	44	115	multi-exon	FALSE	canonical	1	126053	junction_1	205414.7679330773	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	253	2625	75.0	-1	True	NA	NA
PB.10235.25	chr6	+	3957	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	-157	intron_retention	FALSE	canonical	1	71043	junction_3	284753.6249115099	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	952	2685	20.0	-1	True	AATAAA	-23
PB.10235.22	chr6	+	4613	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	-6	intron_retention	FALSE	canonical	1	10015	junction_3	279107.5533389582	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1146	2627	35.0	-1	True	AATAAA	-43
PB.10235.23	chr6	+	4571	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	242067.54774620116	NA	6	NA	TRUE	NA	NA	NA	C	coding	776	2331	254	2584	30.0	-1	True	AATAAA	-44
PB.10235.20	chr6	+	8330	8	incomplete-splice_match	TNFAIP3	ENST00000619035.4	2267	9	-3954	-2107	43	-6	intron_retention	FALSE	canonical	1	500113	junction_3	113460.59590007449	NA	2	NA	TRUE	NA	NA	NA	C	coding	790	2373	3972	6344	35.0	-2	True	AATAAA	-43
PB.10235.21	chr6	+	4631	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	1	intron_retention	FALSE	canonical	1	71043	junction_3	273998.7782394182	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	904	2637	25.0	-1	True	AATAAA	-15
PB.3670.7	chr14	-	2922	11	novel_not_in_catalog	HSP90AA1	novel	3379	11	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	73	junction_4	1768783.4061207748	NA	9	1	TRUE	NA	NA	NA	C	coding	734	2205	60	2264	40.0	-1	True	AATACA	-9
PB.10235.28	chr6	+	3591	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	-475	intron_retention	FALSE	canonical	1	71043	junction_3	273998.7782394182	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	904	2637	25.0	-1	True	CATAAA	-20
PB.10235.29	chr6	+	4648	9	full-splice_match	TNFAIP3	ENST00000612899.4	4735	9	82	5	-52	-5	multi-exon	FALSE	canonical	1	73954	junction_1	220346.79284223626	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	289	2661	30.0	11	True	AATAAA	-44
PB.3670.1	chr14	-	3236	11	full-splice_match	HSP90AA1	ENST00000216281.12	3379	11	142	1	-5	-1	multi-exon	FALSE	canonical	1	882781	junction_9	1525693.287590599	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	65	2263	25.0	-6	True	AATACA	-22
PB.77.8	chr1	+	5104	23	novel_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	18930	junction_1	61651.62527260845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	105	3239	60.0	0	True	AGTAAA	-9
PB.9628.16	chr5	+	2958	11	novel_in_catalog	SFXN1	novel	572	4	NA	NA	4	-1126	combination_of_known_junctions	FALSE	canonical	1	11230	junction_1	231439.32844925037	NA	4	NA	TRUE	NA	NA	NA	C	coding	322	969	108	1076	0.0	1	True	CATAAA	-20
PB.6189.4	chr19	-	2672	4	full-splice_match	ZNF600	ENST00000648973.1	3645	4	26	947	10	-947	multi-exon	FALSE	canonical	1	25531	junction_3	24002.36306422071	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	207	2582	35.0	9	True	AATAAA	-18
PB.9738.1	chr6	-	4700	8	full-splice_match	NEDD9	ENST00000504387.5	3211	8	31	-1520	1	0	multi-exon	FALSE	canonical	1	41966	junction_6	135032.9394266602	NA	5	1	TRUE	NA	NA	NA	C	coding	834	2505	332	2836	5.0	-12	True	ATTAAA	-23
PB.9458.10	chr5	+	3572	22	novel_in_catalog	SEC24A	novel	6299	23	NA	NA	8	-2545	no_combination_of_known_junctions	FALSE	canonical	1	14105	junction_2	63200.33389927297	NA	1	NA	TRUE	NA	NA	NA	C	coding	1035	3108	281	3388	40.0	-9	True	AATAAA	-33
PB.9458.14	chr5	+	5360	20	incomplete-splice_match	SEC24A	ENST00000398844.6	6299	23	23018	-86	-7904	86	5prime_fragment	FALSE	canonical	1	202355	junction_12	38519.05475600873	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	32	2545	30.0	NA	False	AATAAA	-20
PB.7621.3	chr22	+	2508	4	full-splice_match	RANBP1	ENST00000411892.5	584	4	-60	-1864	-27	-1	multi-exon	FALSE	canonical	1	470163	junction_3	153764.06917308955	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	154	768	20.0	-57	True	AATAAA	-18
PB.7621.2	chr22	+	1658	5	incomplete-splice_match	RANBP1	ENST00000402752.5	1132	6	59	1	-41	1	intron_retention	FALSE	canonical	1	16352	junction_4	319569.3188941955	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	168	983	20.0	-620	False	AATAAA	-20
PB.7621.1	chr22	+	1050	6	full-splice_match	RANBP1	ENST00000402752.5	1132	6	81	1	-19	1	multi-exon	FALSE	canonical	1	16352	junction_4	286002.5657007993	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	146	748	20.0	-49	True	AATAAA	-20
PB.7621.5	chr22	+	868	6	full-splice_match	RANBP1	ENST00000402752.5	1132	6	90	174	-10	0	multi-exon	FALSE	canonical	1	16352	junction_4	286002.5657007993	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	137	739	20.0	-40	True	TATAAA	-12
PB.7621.4	chr22	+	1454	5	incomplete-splice_match	RANBP1	ENST00000331821.7	837	6	-34	0	-10	0	intron_retention	FALSE	canonical	1	16352	junction_4	319569.3188941955	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	137	952	20.0	-40	True	TATAAA	-12
PB.2744.6	chr12	-	4454	3	full-splice_match	MDM1	ENST00000393543.7	2718	3	60	-1796	-7	-1635	multi-exon	FALSE	canonical	1	15711	junction_1	26772.0	NA	15	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	AATAAA	-18
PB.2744.7	chr12	-	3935	3	full-splice_match	MDM1	ENST00000430606.3	2170	3	10	-1775	10	1659	multi-exon	FALSE	canonical	1	69255	junction_2	14230.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	127	795	15.0	-10	True	ATTAAA	-19
PB.5277.2	chr17	-	2449	3	novel_in_catalog	SRSF2	novel	2885	2	NA	NA	-23	2	intron_retention	FALSE	canonical	1	575019	junction_1	571527.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	274	903	15.0	494	False	ATTAAA	-29
PB.2744.5	chr12	-	2798	14	novel_in_catalog	MDM1	novel	393	4	NA	NA	-10	1	no_combination_of_known_junctions	FALSE	canonical	1	1018	junction_13	35946.8216320134	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	777	2111	20.0	0	True	AATAAA	-15
PB.2744.2	chr12	-	2969	14	full-splice_match	MDM1	ENST00000303145.11	2918	14	-49	-2	0	2	multi-exon	FALSE	canonical	1	27856	junction_7	29312.830736302967	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	137	2281	20.0	-20	False	AATAAA	-16
PB.2744.3	chr12	-	2854	14	full-splice_match	MDM1	ENST00000411698.6	2472	14	-85	-297	10	2	multi-exon	FALSE	canonical	1	15543	junction_11	30797.113367380935	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	127	2166	20.0	-10	True	AATAAA	-16
PB.5277.6	chr17	-	2522	4	novel_in_catalog	SRSF2	novel	2885	2	NA	NA	-491	0	intron_retention	FALSE	canonical	1	263629	junction_2	644573.2277442701	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	706	1371	20.0	26	True	ATTAAA	-27
PB.2744.1	chr12	-	2926	15	novel_in_catalog	MDM1	novel	393	4	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	1	43690	junction_8	27235.242321507336	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	64	2238	20.0	-12	True	AATAAA	-16
PB.5277.8	chr17	-	2706	3	novel_not_in_catalog	SRSF2	novel	2885	2	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	859036.5	NA	1	1	TRUE	NA	NA	NA	C	coding	209	630	212	841	20.0	-5	True	ATTAAA	-27
PB.5277.9	chr17	-	1621	3	full-splice_match	SRSF2	ENST00000359995.9	1927	3	296	10	230	-6	multi-exon	FALSE	canonical	1	1718073	junction_2	315795.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	132	584	25.0	813	False	ATTAAA	-17
PB.884.10	chr1	+	3124	16	novel_not_in_catalog	ATF6	novel	7496	16	NA	NA	28	-4401	any annotated donor/acceptor	FALSE	canonical	1	6670	junction_10	121850.89575316585	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	40	2109	100.0	2	True	NA	NA
PB.6189.7	chr19	-	3179	7	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-4	-950	any annotated donor/acceptor	FALSE	canonical	1	2929	junction_4	25243.29092661168	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	717	3092	40.0	15	True	AATAAA	-15
PB.2744.8	chr12	-	2753	3	full-splice_match	MDM1	ENST00000393543.7	2718	3	-37	2	20	-2	multi-exon	FALSE	canonical	1	15711	junction_1	26772.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	AATAAA	-20
PB.2744.9	chr12	-	2174	3	full-splice_match	MDM1	ENST00000430606.3	2170	3	10	-14	10	14	multi-exon	FALSE	canonical	1	69255	junction_2	14230.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	127	795	20.0	-10	True	ATTAAA	-26
PB.10978.15	chr8	+	6912	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	2	2706	2	2604	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	1	NA	TRUE	NA	NA	NA	C	coding	1327	3984	25	4008	20.0	2	True	ATTAAA	-17
PB.3753.9	chr15	-	3193	8	novel_in_catalog	KATNBL1	novel	2723	10	NA	NA	-1	149	intron_retention	FALSE	canonical	1	12013	junction_1	15285.535251287976	NA	3	NA	TRUE	NA	NA	NA	C	coding	233	702	135	836	40.0	24	False	ATTAAA	-18
PB.10978.16	chr8	+	2355	16	incomplete-splice_match	TNKS	ENST00000310430.10	9620	27	2	47464	2	3909	3prime_fragment	FALSE	canonical	1	105564	junction_14	36852.022955719665	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2331	25	2355	65.0	2	True	NA	NA
PB.10978.11	chr8	+	6169	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	-1	3452	-1	1858	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	3	NA	TRUE	NA	NA	NA	C	coding	1327	3984	28	4011	15.0	-1	True	ATTAAA	-18
PB.10978.10	chr8	+	1685	10	incomplete-splice_match	TNKS	ENST00000520408.5	1964	11	-2	376	-2	-376	3prime_fragment	FALSE	canonical	1	109743	junction_8	40677.53337266101	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1656	29	1684	70.0	-2	True	NA	NA
PB.8131.9	chr3	-	1816	11	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	8418	junction_4	247673.31324430177	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	146	1087	10.0	1	True	ATTAAA	-18
PB.12135.20	chrX	+	4040	23	novel_not_in_catalog	OGT	novel	5461	22	NA	NA	1	-303	any annotated donor/acceptor	FALSE	canonical	1	4139	junction_5	424161.05635654967	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	870	3482	15.0	1	True	TATAAA	-14
PB.778.9	chr1	+	2754	10	novel_in_catalog	IL6R	novel	1496	7	NA	NA	-60	-26	combination_of_known_junctions	FALSE	canonical	1	5179	junction_5	57267.87482837148	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	57	1283	85.0	-6585	False	NA	NA
PB.9858.7	chr6	+	3727	18	incomplete-splice_match	DDR1	ENST00000376570.8	3820	19	488	-3	16	1	5prime_fragment	FALSE	canonical	1	152985	junction_1	285342.050577377	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	238	2868	10.0	12	True	AATAAA	-17
PB.884.11	chr1	+	7467	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	28	1	28	-1	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	3	NA	TRUE	NA	NA	NA	C	coding	670	2013	40	2052	15.0	2	True	AATAAA	-15
PB.7528.1	chr21	-	2236	1	antisense	novelGene_MX2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-2625	False	NA	NA
PB.8589.30	chr3	+	4400	7	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	1	3694	junction_1	245497.29321686126	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	432	1652	15.0	-3036	False	AATAAA	-18
PB.8589.33	chr3	+	3383	5	incomplete-splice_match	ST6GAL1	ENST00000448044.5	4302	7	21434	2	182	0	5prime_fragment	FALSE	canonical	1	582920	junction_4	64406.14511587773	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	108	635	15.0	620	False	AATAAA	-18
PB.11327.12	chr8	-	1514	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	0	5230	0	-1	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	193	1260	45.0	-1	True	AATAAA	-22
PB.10875.11	chr7	-	3543	9	incomplete-splice_match	ZC3HAV1	ENST00000464606.5	4776	13	-365	14427	0	-5	3prime_fragment	FALSE	canonical	1	49126	junction_5	110542.9018898743	NA	1	NA	TRUE	NA	NA	NA	C	coding	821	2466	389	2854	25.0	0	True	NA	NA
PB.11327.10	chr8	-	1666	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	0	5078	0	139	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	193	1260	70.0	-1	True	AATACA	-40
PB.11327.11	chr8	-	2716	8	novel_in_catalog	FBXO32	novel	6744	9	NA	NA	0	1	intron_retention	FALSE	canonical	1	310956	junction_7	55514.625619869636	NA	8	NA	TRUE	NA	NA	NA	C	coding	210	633	1828	2460	50.0	-1	True	AATAAA	-24
PB.9845.9	chr6	+	3083	5	novel_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	intron_retention	FALSE	canonical	1	5559252	junction_2	458200.3595519104	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	749	1471	15.0	0	True	AATAAA	-18
PB.5267.1	chr17	+	2552	1	intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-7962	False	AAAAAG	-18
PB.10875.10	chr7	-	2833	9	full-splice_match	ZC3HAV1	ENST00000471652.1	3182	9	345	4	-20	-4	multi-exon	FALSE	canonical	1	271013	junction_5	58396.1345162289	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	44	2143	30.0	-21	True	NA	NA
PB.7248.4	chr20	-	2024	10	novel_not_in_catalog	AL035458.2	novel	478	3	NA	NA	-22181	-45430	any annotated donor/acceptor	FALSE	canonical	1	35351	junction_2	534803.7303283432	NA	1	NA	TRUE	NA	NA	NA	B	coding	391	1176	85	1260	30.0	0	True	AATAAA	-16
PB.7248.5	chr20	-	1806	11	novel_not_in_catalog	AL035458.2	novel	478	3	NA	NA	-22216	-45430	any annotated donor/acceptor	FALSE	canonical	1	261070	junction_1	601715.0558351437	NA	0	NA	TRUE	NA	NA	NA	B	coding	432	1299	120	1418	30.0	-35	False	AATAAA	-16
PB.1132.5	chr1	-	5026	35	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	12	711	any annotated donor/acceptor	FALSE	canonical	1	133931	junction_18	49345.423857869566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1393	4182	66	4247	100.0	-1	True	NA	NA
PB.7248.1	chr20	-	3723	9	novel_in_catalog	AL035458.2	novel	478	3	NA	NA	-22184	-45430	intron_retention	FALSE	canonical	1	1069209	junction_1	502375.07742597064	NA	0	NA	TRUE	NA	NA	NA	B	coding	306	921	2039	2959	30.0	-3	True	AATAAA	-16
PB.7248.2	chr20	-	3267	10	novel_in_catalog	AL035458.2	novel	478	3	NA	NA	-21816	-45430	no_combination_of_known_junctions	FALSE	canonical	1	14104	junction_9	685050.5157618346	NA	1	NA	TRUE	NA	NA	NA	B	coding	404	1215	1289	2503	30.0	0	True	AATAAA	-16
PB.7248.3	chr20	-	2075	10	full-splice_match	AHCY	ENST00000217426.6	2143	10	-7	75	2	-73	multi-exon	FALSE	canonical	1	1069209	junction_1	486072.84740811447	NA	0	NA	TRUE	NA	NA	NA	A	coding	432	1299	86	1384	50.0	-1	True	NA	NA
PB.6280.3	chr19	-	2359	3	novel_not_in_catalog	ZBTB45	novel	2352	3	NA	NA	-13	-4	any annotated donor/acceptor	FALSE	canonical	1	4980	junction_2	51488.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	304	1839	25.0	224	False	AATAAA	-28
PB.6280.2	chr19	-	2133	3	full-splice_match	ZBTB45	ENST00000594051.5	2541	3	406	2	-65	-2	multi-exon	FALSE	canonical	1	82439	junction_2	12758.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	76	1611	25.0	-20	True	AATAAA	-30
PB.6280.1	chr19	-	2262	3	full-splice_match	ZBTB45	ENST00000600990.1	2159	3	-69	-34	-69	-2	multi-exon	FALSE	canonical	1	6979	junction_2	50488.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	205	1740	25.0	-24	True	AATAAA	-30
PB.7958.5	chr3	+	3615	20	novel_in_catalog	CAPN7	novel	781	4	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	1	62106	junction_14	55980.05126591143	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	266	2047	35.0	-15	True	AATAAA	-19
PB.9628.15	chr5	+	2896	11	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	0	-1128	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	226896.38196368405	NA	2	1	TRUE	NA	NA	NA	C	coding	282	849	85	933	0.0	-4	True	CATAAA	-18
PB.6189.9	chr19	-	3173	6	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	-3	-951	any annotated donor/acceptor	FALSE	canonical	1	1611	junction_4	27122.541255568216	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	712	3087	40.0	-4	True	AATAAA	-14
PB.9845.8	chr6	+	1687	8	full-splice_match	HLA-E	ENST00000376630.4	2601	8	43	871	0	-871	multi-exon	FALSE	canonical	1	3991824	junction_1	1178466.805725549	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	23	1099	30.0	-2	True	NA	NA
PB.1580.4	chr10	+	2845	11	full-splice_match	ZFYVE27	ENST00000337540.11	2927	11	71	11	9	0	multi-exon	FALSE	canonical	1	1964	junction_2	82937.30785213612	NA	2	1	TRUE	NA	NA	NA	C	coding	372	1119	132	1250	5.0	-16	False	AATAAA	-16
PB.1580.6	chr10	+	2156	6	incomplete-splice_match	ZFYVE27	ENST00000359980.5	2997	12	13189	-8	296	-3	5prime_fragment	FALSE	canonical	1	157465	junction_3	39643.719399672875	NA	2	NA	TRUE	NA	NA	NA	C	coding	171	516	38	553	10.0	NA	False	AATAAA	-24
PB.1580.1	chr10	+	2943	12	novel_in_catalog	ZFYVE27	novel	2927	11	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	1	131567	junction_1	53695.09922864054	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	133	1347	5.0	-17	False	AATAAA	-17
PB.1580.3	chr10	+	2932	12	novel_in_catalog	ZFYVE27	novel	2927	11	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	10726	junction_2	89897.68333495439	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	405	1325	5.0	-16	False	AATAAA	-28
PB.1580.2	chr10	+	3048	13	novel_not_in_catalog	ZFYVE27	novel	2927	11	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	6464	junction_10	101541.73181341091	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	402	1154	5.0	-17	False	AATAAA	-15
PB.7780.1	chr22	+	1096	4	full-splice_match	TOMM22	ENST00000216034.5	2040	4	6	938	6	323	multi-exon	FALSE	canonical	1	573593	junction_3	275729.8065945477	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	26	454	35.0	-21	True	ATTAAA	-14
PB.7780.3	chr22	+	4290	4	full-splice_match	TOMM22	ENST00000216034.5	2040	4	12	-2262	12	2262	multi-exon	FALSE	canonical	1	573593	junction_3	275729.8065945477	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	20	448	30.0	-15	True	AATAAA	-22
PB.7780.2	chr22	+	2036	4	full-splice_match	TOMM22	ENST00000216034.5	2040	4	11	-7	11	7	multi-exon	FALSE	canonical	1	573593	junction_3	275729.8065945477	NA	6	NA	TRUE	NA	NA	NA	C	coding	142	429	21	449	35.0	-16	True	ATTAAA	-23
PB.3712.26	chr14	-	2958	10	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	784261.4997724663	NA	4	1	TRUE	NA	NA	NA	B	coding	421	1266	391	1656	15.0	-6808	False	AATAAA	-21
PB.1603.5	chr10	+	5477	20	full-splice_match	SLF2	ENST00000238961.8	7288	20	394	1417	0	-1372	multi-exon	FALSE	canonical	1	113195	junction_9	34912.7139043387	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	149	3670	40.0	0	True	TATAAA	-21
PB.1603.4	chr10	+	3686	20	full-splice_match	SLF2	ENST00000238961.8	7288	20	394	3208	0	2338	multi-exon	FALSE	canonical	1	113195	junction_9	34912.7139043387	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	149	3670	65.0	0	True	NA	NA
PB.1603.7	chr10	+	5021	20	full-splice_match	SLF2	ENST00000238961.8	7288	20	394	1873	0	-1828	multi-exon	FALSE	canonical	1	113195	junction_9	34912.7139043387	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	149	3670	45.0	0	True	AATAAA	-35
PB.1603.6	chr10	+	5399	19	novel_in_catalog	SLF2	novel	7288	20	NA	NA	0	-1372	no_combination_of_known_junctions	FALSE	canonical	1	2475	junction_16	49550.83760504066	NA	2	NA	TRUE	NA	NA	NA	C	coding	1147	3444	149	3592	40.0	0	True	TATAAA	-21
PB.1603.1	chr10	+	4534	20	novel_not_in_catalog	SLF2	novel	7288	20	NA	NA	0	-2312	any annotated donor/acceptor	FALSE	canonical	1	32419	junction_4	44482.98746456732	NA	0	NA	TRUE	NA	NA	NA	C	coding	1172	3519	149	3667	30.0	0	True	NA	NA
PB.11068.6	chr8	-	2432	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-53	436	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	192785.86750200338	NA	4	1	TRUE	NA	NA	NA	C	coding	179	540	970	1509	90.0	1	True	AAGAAA	-30
PB.1603.3	chr10	+	4205	20	full-splice_match	SLF2	ENST00000238961.8	7288	20	394	2689	0	-2644	multi-exon	FALSE	canonical	1	113195	junction_9	34912.7139043387	NA	4	NA	TRUE	NA	NA	NA	C	coding	1173	3522	149	3670	30.0	0	True	AATAAA	-34
PB.1603.2	chr10	+	6890	20	full-splice_match	SLF2	ENST00000238961.8	7288	20	394	4	0	-4	multi-exon	FALSE	canonical	1	113195	junction_9	34912.7139043387	NA	0	NA	TRUE	NA	NA	NA	C	coding	1173	3522	149	3670	30.0	0	True	ATTAAA	-20
PB.1712.2	chr10	+	3275	18	full-splice_match	PTPRE	ENST00000306042.9	4957	18	-32	1714	-32	-1714	multi-exon	FALSE	canonical	1	142060	junction_4	36648.39484572505	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	112	2040	85.0	-2655	False	NA	NA
PB.1712.3	chr10	+	3138	18	full-splice_match	PTPRE	ENST00000306042.9	4957	18	4	1815	4	-1815	multi-exon	FALSE	canonical	1	142060	junction_4	36648.39484572505	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	76	2004	50.0	0	True	AATAAA	-18
PB.7403.3	chr20	+	2430	32	full-splice_match	COL9A3	ENST00000649368.1	2497	32	0	67	0	-52	multi-exon	FALSE	canonical	1	47673	junction_1	46124.37463912283	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	16	2070	35.0	0	True	AATAAA	-19
PB.1712.1	chr10	+	5001	18	full-splice_match	PTPRE	ENST00000306042.9	4957	18	-45	1	-45	-1	multi-exon	TRUE	canonical	1	142060	junction_4	36648.39484572505	NA	3	NA	TRUE	NA	NA	NA	C	coding	642	1929	125	2053	10.0	-2668	False	GATAAA	-18
PB.2447.2	chr12	-	2063	4	novel_in_catalog	CD163L1	novel	815	5	NA	NA	79	0	intron_retention	FALSE	canonical	1	70011	junction_1	1601.3987635813885	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-23	True	AATAAA	-25
PB.7403.4	chr20	+	2358	31	novel_in_catalog	COL9A3	novel	635	12	NA	NA	0	-52	no_combination_of_known_junctions	FALSE	canonical	1	2045	junction_3	53117.46056272101	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	16	1998	35.0	0	True	AATAAA	-19
PB.1712.4	chr10	+	2255	18	full-splice_match	PTPRE	ENST00000306042.9	4957	18	6	2696	6	-2696	multi-exon	FALSE	canonical	1	142060	junction_4	36648.39484572505	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	74	2002	35.0	2	True	AGTAAA	-14
PB.1712.5	chr10	+	2146	17	novel_in_catalog	PTPRE	novel	5331	21	NA	NA	8	-2712	no_combination_of_known_junctions	FALSE	canonical	1	3940	junction_3	59041.49625366124	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	467	1909	35.0	4	True	CATAAA	-25
PB.7403.9	chr20	+	2576	31	novel_in_catalog	COL9A3	novel	635	12	NA	NA	0	-50	intron_retention	FALSE	canonical	1	47673	junction_1	44059.69133220169	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	16	1644	35.0	0	True	AATAAA	-21
PB.3428.16	chr14	-	7050	31	full-splice_match	NIN	ENST00000245441.9	10293	31	-51	3294	-51	361	multi-exon	FALSE	canonical	1	48689	junction_30	100175.54101392326	NA	0	NA	TRUE	NA	NA	NA	C	coding	2133	6402	243	6644	30.0	1841	False	TATAAA	-16
PB.11244.13	chr8	+	3219	27	full-splice_match	INTS8	ENST00000523731.5	4633	27	-7	1421	2	-2	multi-exon	FALSE	canonical	1	164843	junction_1	131912.53814568568	NA	5	1	TRUE	NA	NA	NA	C	coding	995	2988	141	3128	15.0	-4	True	AATAAA	-41
PB.9979.5	chr6	+	3691	9	novel_not_in_catalog	NFYA	novel	3811	10	NA	NA	11	-4	any annotated donor/acceptor	FALSE	canonical	1	58875	junction_5	81825.33550038154	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	191	1129	40.0	-19	True	AATAAA	-17
PB.3712.22	chr14	-	3109	10	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-413984	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	769949.9852409045	NA	16	2	TRUE	NA	NA	NA	B	coding	265	798	903	1700	15.0	-1	True	AATAAA	-20
PB.3404.6	chr14	+	3510	14	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	4	-2	intron_retention	FALSE	canonical	1	48196	junction_3	113197.87279463679	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	2003	2824	30.0	-15	True	AATAAA	-19
PB.3404.7	chr14	+	3392	14	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	4	-2	intron_retention	FALSE	canonical	1	74471	junction_3	95493.61037895207	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	1060	2706	30.0	-15	True	AATAAA	-19
PB.3404.4	chr14	+	1838	1	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	0	-9797	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-19	True	NA	NA
PB.3404.5	chr14	+	2835	3	incomplete-splice_match	PRPF39	ENST00000355765.10	2868	14	1	17157	1	1578	intron_retention	FALSE	canonical	1	242642	junction_2	14383.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	170	823	85.0	-18	True	NA	NA
PB.3404.2	chr14	+	3305	16	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	48196	junction_3	121222.97185900406	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	1797	2618	25.0	-22	True	AATAAA	-20
PB.3404.3	chr14	+	2966	15	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	74825	junction_3	111059.80573200007	NA	10	1	TRUE	NA	NA	NA	C	coding	420	1263	171	1433	30.0	-19	True	AATAAA	-19
PB.8300.2	chr3	+	4619	6	full-splice_match	GTPBP8	ENST00000383678.6	1360	6	320	-3579	-180	2986	multi-exon	FALSE	canonical	1	130099	junction_2	33278.31594897795	NA	4	NA	TRUE	NA	NA	NA	C	coding	134	405	213	617	35.0	254	False	AATAAA	-19
PB.3404.1	chr14	+	2993	16	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-39	-344	intron_retention	TRUE	canonical	1	48196	junction_3	121222.97185900406	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	1833	2654	60.0	-2811	False	AAGAAA	-32
PB.6015.3	chr19	+	3716	5	novel_in_catalog	CCDC97	novel	3322	5	NA	NA	249	-16	combination_of_known_junctions	FALSE	canonical	1	19220	junction_1	114600.08192841748	NA	2	1	TRUE	NA	NA	NA	C	coding	278	837	728	1564	35.0	-64	False	ATTAAA	-10
PB.6015.2	chr19	+	3265	5	full-splice_match	CCDC97	ENST00000269967.3	3322	5	59	-2	59	2	multi-exon	FALSE	canonical	1	179546	junction_2	57277.922256310936	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	64	1095	20.0	20	True	ATTAAA	-28
PB.6015.1	chr19	+	2655	5	full-splice_match	CCDC97	ENST00000269967.3	3322	5	-15	682	-15	-682	multi-exon	FALSE	canonical	1	179546	junction_2	57277.922256310936	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	138	1169	10.0	-54	True	ATTAAA	-18
PB.3404.8	chr14	+	3519	13	full-splice_match	PRPF39	ENST00000477626.5	3507	13	-12	0	-1	0	multi-exon	FALSE	canonical	1	190765	junction_7	74507.69035414883	NA	3	NA	TRUE	NA	NA	NA	C	coding	459	1380	1452	2831	20.0	-12	True	AATAAA	-21
PB.3404.9	chr14	+	2714	14	novel_not_in_catalog	PRPF39	novel	2868	14	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	14392	junction_2	120789.95981234308	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	163	2028	30.0	-11	True	AATAAA	-19
PB.5799.1	chr19	+	1468	4	full-splice_match	FAM32A	ENST00000263384.11	1455	4	-15	2	-15	-2	multi-exon	FALSE	canonical	1	830091	junction_3	48427.60004377669	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	41	379	15.0	-10	False	AATAAA	-19
PB.5799.3	chr19	+	1511	2	novel_in_catalog	FAM32A	novel	1168	3	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	32767	junction_1	0.0	NA	6	1	TRUE	NA	NA	NA	C	coding	74	225	198	422	15.0	0	True	AATAAA	-19
PB.5799.2	chr19	+	1567	3	full-splice_match	FAM32A	ENST00000589852.5	1168	3	31	-430	-7	-2	multi-exon	FALSE	canonical	1	830091	junction_2	20439.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	200	478	15.0	-2	True	AATAAA	-19
PB.9513.1	chr5	+	2595	1	full-splice_match	PCDHB9	ENST00000316105.6	4415	1	29	1791	29	942	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	797	2394	164	2557	25.0	-5	True	AATAAA	-20
PB.9979.4	chr6	+	3698	9	full-splice_match	NFYA	ENST00000353205.5	1660	9	-27	-2011	11	-15	multi-exon	FALSE	canonical	1	128895	junction_2	58887.72811460806	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	191	1147	65.0	-19	True	AATAAA	-6
PB.9600.2	chr5	-	3301	7	novel_in_catalog	CCNJL	novel	7376	7	NA	NA	29	3	combination_of_known_junctions	FALSE	canonical	1	6559	junction_2	29739.299266944552	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	217	972	10.0	26	True	AATAAA	-17
PB.9600.3	chr5	-	2008	6	full-splice_match	CCNJL	ENST00000257536.12	3171	6	33	1130	10	-1114	multi-exon	FALSE	canonical	1	51568	junction_5	11531.488951562153	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	257	1417	10.0	-14	True	NA	NA
PB.9600.1	chr5	-	3139	6	full-splice_match	CCNJL	ENST00000257536.12	3171	6	36	-4	-8	0	multi-exon	FALSE	canonical	1	51568	junction_5	11531.488951562153	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	254	1414	15.0	-11	True	AATAAA	-25
PB.11068.8	chr8	-	2404	3	novel_in_catalog	DUSP4	novel	5537	4	NA	NA	-53	435	no_combination_of_known_junctions	FALSE	canonical	1	1814	junction_2	236260.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	1075	1482	85.0	1	True	AAGAAA	-29
PB.467.3	chr1	-	4365	4	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1457	-76	any annotated donor/acceptor	FALSE	canonical	1	29156	junction_3	295486.92491922923	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5	True	ATTAAA	-16
PB.11068.9	chr8	-	2399	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-13	435	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	192785.86750200338	NA	26	1	TRUE	NA	NA	NA	C	coding	354	1065	413	1477	85.0	0	True	AAGAAA	-29
PB.6899.9	chr2	-	2502	1	novel_in_catalog	OSGEPL1	novel	2216	9	NA	NA	0	-5102	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-7	True	NA	NA
PB.6899.8	chr2	-	1771	9	novel_in_catalog	OSGEPL1	novel	1885	9	NA	NA	4	-282	intron_retention	FALSE	canonical	1	55385	junction_8	31725.340161444685	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	109	1353	25.0	-3	True	AATAAA	-23
PB.6899.7	chr2	-	2020	9	novel_in_catalog	OSGEPL1	novel	1885	9	NA	NA	-2	-29	intron_retention	FALSE	canonical	1	4923	junction_8	47513.70348646799	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	268	1512	65.0	-9	True	AAAAAG	-34
PB.6899.6	chr2	-	1985	9	novel_in_catalog	OSGEPL1	novel	1885	9	NA	NA	-2	-29	intron_retention	FALSE	canonical	1	7229	junction_8	47029.17452962044	NA	3	NA	TRUE	NA	NA	NA	C	coding	414	1245	233	1477	65.0	-9	True	AAAAAG	-34
PB.6899.5	chr2	-	2041	10	novel_not_in_catalog	OSGEPL1	novel	1885	9	NA	NA	-12	-29	intron_retention	FALSE	canonical	1	1740	junction_1	48441.17654574259	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	142	1386	65.0	-36	False	AAAAAG	-34
PB.6899.4	chr2	-	2146	9	novel_in_catalog	OSGEPL1	novel	1885	9	NA	NA	0	-29	intron_retention	FALSE	canonical	1	7229	junction_8	41976.113674736196	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	231	1475	65.0	-7	True	AAAAAG	-34
PB.6899.3	chr2	-	1902	9	full-splice_match	OSGEPL1	ENST00000264151.9	1885	9	-25	8	0	-8	multi-exon	FALSE	canonical	1	25014	junction_1	38998.83741776798	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	129	1373	40.0	-23	True	AATAAA	-10
PB.6899.2	chr2	-	2226	9	novel_in_catalog	OSGEPL1	novel	1885	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	4923	junction_8	42554.662903839046	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	282	1526	20.0	-23	True	AATAAA	-18
PB.6899.1	chr2	-	2076	9	novel_in_catalog	OSGEPL1	novel	1885	9	NA	NA	-1	1	intron_retention	FALSE	canonical	1	55385	junction_8	31725.340161444685	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	131	1375	20.0	-25	True	AATAAA	-19
PB.6109.1	chr19	+	3073	5	full-splice_match	EHD2	ENST00000538399.1	1766	5	-27	-1280	-27	-1	multi-exon	FALSE	canonical	1	6986	junction_1	281214.4704127083	NA	3	NA	TRUE	NA	NA	NA	C	coding	407	1224	149	1372	15.0	-3485	False	AATAAA	-17
PB.6109.2	chr19	+	3508	6	full-splice_match	EHD2	ENST00000263277.7	3585	6	77	0	-2	0	multi-exon	FALSE	canonical	1	235645	junction_1	190540.022649731	NA	2	NA	TRUE	NA	NA	NA	C	coding	543	1632	175	1806	10.0	-2	True	AATAAA	-18
PB.11509.8	chr9	+	2855	8	novel_not_in_catalog	UBAP1	novel	2029	6	NA	NA	-3	1	any annotated donor/acceptor	FALSE	canonical	1	1204	junction_3	249529.8913000286	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	661	1866	20.0	-5	True	AATAAA	-12
PB.11509.9	chr9	+	2956	8	novel_not_in_catalog	UBAP1	novel	2029	6	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	666	junction_1	250812.3427270773	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	459	1967	20.0	-3	True	AATAAA	-12
PB.817.20	chr1	+	2057	10	novel_in_catalog	LMNA	novel	570	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	29754	junction_5	3610623.897607048	NA	13	NA	TRUE	NA	NA	NA	C	coding	342	1029	198	1226	5.0	-6351	False	ATTAAA	-18
PB.4989.7	chr17	+	2548	19	full-splice_match	STAT5A	ENST00000590949.5	3318	19	623	147	1	-147	multi-exon	FALSE	canonical	1	5487	junction_6	161713.47887515227	NA	5	1	TRUE	NA	NA	NA	C	coding	794	2385	120	2504	15.0	-8	True	NA	NA
PB.4989.6	chr17	+	3629	17	novel_in_catalog	STAT5A	novel	4301	20	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	5487	junction_6	177351.23804075868	NA	3	NA	TRUE	NA	NA	NA	C	coding	761	2286	134	2419	20.0	-22	True	AATAAA	-14
PB.4989.5	chr17	+	3528	19	full-splice_match	STAT5A	ENST00000590949.5	3318	19	501	-711	-101	-369	multi-exon	FALSE	canonical	1	5487	junction_6	161713.47887515227	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	242	2626	85.0	19	True	NA	NA
PB.4989.4	chr17	+	3777	19	full-splice_match	STAT5A	ENST00000590949.5	3318	19	622	-1081	0	1	multi-exon	FALSE	canonical	1	5487	junction_6	161713.47887515227	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	121	2505	15.0	-9	True	AATAAA	-15
PB.4989.3	chr17	+	3664	16	novel_in_catalog	STAT5A	novel	4301	20	NA	NA	-120	-2	no_combination_of_known_junctions	FALSE	canonical	1	5487	junction_5	194268.90483508218	NA	2	NA	TRUE	NA	NA	NA	C	coding	731	2196	261	2456	25.0	0	True	AATAAA	-12
PB.4989.2	chr17	+	3703	18	full-splice_match	STAT5A	ENST00000546010.6	3086	18	395	-1012	2	-1	multi-exon	FALSE	canonical	1	5487	junction_5	180076.46871701945	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	139	2433	20.0	-27	True	AATAAA	-13
PB.4989.1	chr17	+	3882	19	novel_not_in_catalog	STAT5A	novel	4301	20	NA	NA	-151	0	any annotated donor/acceptor	FALSE	canonical	1	3375	junction_9	178814.9215490146	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	292	1410	20.0	-1914	False	AATAAA	-14
PB.9931.2	chr6	-	3153	5	novel_not_in_catalog	BAK1	novel	2212	7	NA	NA	3	-1	intron_retention	FALSE	canonical	1	12811	junction_3	17855.913479503084	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	1598	1903	20.0	19	True	AATAAA	-16
PB.7270.5	chr20	+	2709	4	full-splice_match	AAR2	ENST00000373932.3	2689	4	-21	1	-1	-1	multi-exon	FALSE	canonical	1	20738	junction_1	192562.92177594546	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	368	1522	5.0	-14	True	ATTAAA	-18
PB.7270.4	chr20	+	6153	4	novel_not_in_catalog	AAR2	novel	1466	4	NA	NA	2	-6043	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	168954.73129674574	NA	16	NA	TRUE	NA	NA	NA	C	coding	335	1008	92	1099	80.0	-17	True	NA	NA
PB.7270.7	chr20	+	2789	5	novel_not_in_catalog	AAR2	novel	1466	4	NA	NA	3	-2	any annotated donor/acceptor	FALSE	canonical	1	14252	junction_1	206356.5425887619	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	449	1603	10.0	-10	True	ATTAAA	-17
PB.7270.6	chr20	+	2512	5	novel_not_in_catalog	AAR2	novel	1466	4	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	8036	junction_1	207920.43623027415	NA	1	1	TRUE	NA	NA	NA	C	coding	384	1155	172	1326	10.0	-12	True	ATTAAA	-17
PB.7270.1	chr20	+	2603	5	novel_not_in_catalog	AAR2	novel	1466	4	NA	NA	-9	2	any annotated donor/acceptor	FALSE	canonical	1	8036	junction_1	206591.80307855876	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	259	1413	0.0	-28	True	ATTAAA	-21
PB.7270.3	chr20	+	2868	5	novel_not_in_catalog	AAR2	novel	1466	4	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	14252	junction_1	205007.3654902428	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	528	1682	10.0	-18	True	ATTAAA	-17
PB.7270.2	chr20	+	2896	4	novel_not_in_catalog	AAR2	novel	1466	4	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	16242	junction_1	194663.284295387	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	556	1710	10.0	-18	True	ATTAAA	-17
PB.5272.10	chr17	+	2501	4	incomplete-splice_match	SNHG16	ENST00000590435.5	1947	5	4	-68	4	-1	intron_retention	FALSE	canonical	1	423	junction_2	105454.66730411803	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	AATAAA	-18
PB.7270.8	chr20	+	2411	4	full-splice_match	AAR2	ENST00000320849.8	2430	4	15	4	-5	-4	multi-exon	FALSE	canonical	1	86592	junction_1	161855.39457388088	NA	44	1	TRUE	NA	NA	NA	C	coding	384	1155	73	1227	15.0	2	True	ATTAAA	-15
PB.11889.6	chr9	-	2081	10	incomplete-splice_match	BRD3	ENST00000303407.11	5652	12	19	5749	19	-26	3prime_fragment	FALSE	canonical	1	108094	junction_9	42117.76196644034	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	168	2081	55.0	0	True	NA	NA
PB.9060.7	chr4	+	3687	12	full-splice_match	PALLD	ENST00000507735.6	4392	12	65	640	65	-612	multi-exon	FALSE	canonical	1	112301	junction_1	314206.60288801976	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	249	2267	70.0	-2	True	GATAAA	-5
PB.8680.1	chr4	+	3543	12	full-splice_match	STK32B	ENST00000282908.9	3582	12	41	-2	41	2	multi-exon	FALSE	canonical	1	33043	junction_1	8634.577288939956	NA	2	NA	TRUE	NA	NA	NA	A	coding	414	1245	382	1626	25.0	-34	True	AATAAA	-24
PB.75.3	chr1	+	2433	7	full-splice_match	SLC25A33	ENST00000302692.6	3854	7	-39	1460	-39	-1460	multi-exon	FALSE	canonical	1	131	junction_2	14072.855519482257	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	250	1215	80.0	-22	True	TTTAAA	-18
PB.75.2	chr1	+	2294	1	genic	SLC25A33	novel	NA	NA	NA	NA	-42	-43446	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	169	510	3	512	90.0	-25	True	NA	NA
PB.5146.7	chr17	+	2072	11	novel_not_in_catalog	PRR11	novel	2332	10	NA	NA	-3	380	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	114686.87972196296	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	62	1144	65.0	4	True	NA	NA
PB.5146.6	chr17	+	2357	11	novel_not_in_catalog	PRR11	novel	2332	10	NA	NA	-3	0	any annotated donor/acceptor	TRUE	canonical	1	15	junction_10	114682.73599461255	NA	4	NA	TRUE	NA	NA	NA	C	coding	360	1083	62	1144	90.0	4	True	NA	NA
PB.5146.5	chr17	+	2143	11	novel_not_in_catalog	PRR11	novel	2332	10	NA	NA	3	1985	any annotated donor/acceptor	TRUE	canonical	0	0	junction_10	114686.87972196296	NA	4	NA	TRUE	NA	NA	NA	C	coding	360	1083	77	1159	10.0	-11	True	AATAAA	-15
PB.5146.4	chr17	+	2094	10	full-splice_match	PRR11	ENST00000262293.8	2332	10	233	5	0	-5	multi-exon	FALSE	canonical	1	283382	junction_2	47142.63943437518	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	80	1162	75.0	-14	True	NA	NA
PB.5146.3	chr17	+	1729	11	novel_not_in_catalog	PRR11	novel	2332	10	NA	NA	-37	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	114686.87972196296	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	117	1199	90.0	4	True	NA	NA
PB.5146.2	chr17	+	2499	11	novel_not_in_catalog	PRR11	novel	2332	10	NA	NA	-39	647	any annotated donor/acceptor	TRUE	canonical	0	0	junction_10	114686.87972196296	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	119	1201	10.0	2	True	AATAAA	-14
PB.5146.1	chr17	+	1550	10	full-splice_match	PRR11	ENST00000262293.8	2332	10	172	610	-61	-610	multi-exon	FALSE	canonical	1	283382	junction_2	47142.63943437518	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	141	1223	80.0	0	True	NA	NA
PB.7260.1	chr20	+	2460	17	novel_in_catalog	CEP250	novel	868	7	NA	NA	-12	-12	combination_of_known_junctions	FALSE	canonical	1	10661	junction_1	29270.79130400304	NA	2	1	TRUE	NA	NA	NA	B	coding	692	2076	384	2459	50.0	-23	True	AAGAAA	-4
PB.828.4	chr1	-	1549	2	full-splice_match	AL590666.2	ENST00000448869.1	758	2	-25	-766	-25	766	multi-exon	FALSE	canonical	1	37444	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	971	1279	20.0	-10	True	NA	NA
PB.5485.1	chr18	+	3353	1	incomplete-splice_match	SMAD4	ENST00000398417.6	8495	12	52073	6	4436	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1694	False	ATTAAA	-15
PB.665.2	chr1	+	2036	3	novel_not_in_catalog	FP700111.1	novel	2502	4	NA	NA	74719	-195062	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.665.1	chr1	+	2142	3	novel_not_in_catalog	FP700111.1	novel	2502	4	NA	NA	74702	-195062	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.8882.2	chr4	+	2960	2	full-splice_match	TIGD2	ENST00000603357.2	3217	2	29	228	29	-228	multi-exon	FALSE	canonical	1	48255	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	1264	2841	25.0	-4	True	NA	NA
PB.11244.10	chr8	+	3062	26	novel_in_catalog	INTS8	novel	735	6	NA	NA	-5	3	no_combination_of_known_junctions	FALSE	canonical	1	5644	junction_7	148867.34827653243	NA	3	1	TRUE	NA	NA	NA	C	coding	943	2832	148	2979	30.0	-11	True	AATAAA	-33
PB.12240.2	chrX	-	2205	9	novel_in_catalog	UPF3B	novel	834	7	NA	NA	-8	0	intron_retention	FALSE	canonical	1	4402	junction_5	109605.19447401889	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	52	1353	25.0	-17	True	AATAAA	-20
PB.9979.8	chr6	+	2731	9	full-splice_match	NFYA	ENST00000353205.5	1660	9	-26	-1045	12	-981	multi-exon	FALSE	canonical	1	128895	junction_2	58887.72811460806	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	190	1146	25.0	-18	True	AATAAA	-16
PB.11167.8	chr8	-	5118	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	75	4749	75	-4749	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	185	3853	20.0	8	True	AATATA	-26
PB.11167.9	chr8	-	3953	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	13	5976	13	-5976	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1222	3669	247	3915	30.0	6	True	AATAAA	-19
PB.11167.6	chr8	-	5997	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	91	3854	91	-3854	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	169	3837	35.0	84	False	AATAAA	-21
PB.11167.7	chr8	-	5517	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	-5	4430	-5	-4430	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	1222	3669	265	3933	20.0	-12	True	AATATA	-26
PB.11167.4	chr8	-	4964	3	novel_not_in_catalog	VCPIP1	novel	9942	3	NA	NA	3383	-2120	any annotated donor/acceptor	FALSE	canonical	1	1031	junction_2	79857.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	150	1070	70.0	3376	False	NA	NA
PB.11167.5	chr8	-	7204	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	-13	2751	-13	-2751	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	1222	3669	273	3941	25.0	-20	True	CATAAA	-19
PB.11167.2	chr8	-	7835	3	full-splice_match	VCPIP1	ENST00000310421.4	9942	3	-13	2120	-13	-2120	multi-exon	FALSE	canonical	1	143453	junction_2	8646.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1222	3669	273	3941	70.0	-20	True	NA	NA
PB.5741.3	chr19	-	2267	4	full-splice_match	ZNF44	ENST00000355684.5	2119	4	5	-153	-2	153	multi-exon	FALSE	canonical	1	42111	junction_3	21828.886676959857	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	189	2036	75.0	0	True	NA	NA
PB.8533.6	chr3	-	2506	10	full-splice_match	GNB4	ENST00000232564.7	6434	10	27	3901	27	859	multi-exon	FALSE	canonical	1	130618	junction_9	55707.21611633541	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	261	1283	40.0	-2	True	AATAAA	-19
PB.7536.8	chr21	+	2617	17	incomplete-splice_match	SLC37A1	ENST00000352133.2	3664	20	20691	20	-8912	-20	5prime_fragment	FALSE	canonical	1	108561	junction_11	38284.50667024945	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	34	1557	55.0	1535	False	AATAAA	-13
PB.11397.3	chr8	-	2531	14	novel_in_catalog	BOP1	novel	2303	16	NA	NA	-43	3	intron_retention	FALSE	canonical	1	151	junction_3	242936.00039536066	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	919	2466	5.0	24	True	GGGGCT	-45
PB.11397.2	chr8	-	2338	16	full-splice_match	BOP1	ENST00000569669.5	2303	16	-35	0	-35	0	multi-exon	FALSE	canonical	1	151	junction_3	228478.9940015979	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	36	2276	5.0	32	True	GGGGCT	-42
PB.11397.5	chr8	-	2434	15	novel_in_catalog	BOP1	novel	2303	16	NA	NA	-61	1	intron_retention	FALSE	canonical	1	151	junction_3	235355.6062966534	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	62	1297	5.0	6	True	GGGGCT	-43
PB.11397.4	chr8	-	2514	14	novel_in_catalog	BOP1	novel	2303	16	NA	NA	-63	3	intron_retention	FALSE	canonical	1	151	junction_3	242874.85517701178	NA	8	1	TRUE	NA	NA	NA	C	coding	395	1188	64	1251	5.0	4	True	GGGGCT	-45
PB.11397.6	chr8	-	2266	15	novel_in_catalog	BOP1	novel	2303	16	NA	NA	-44	0	no_combination_of_known_junctions	FALSE	canonical	1	107	junction_7	235370.5616742611	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	45	2204	5.0	23	True	GGGGCT	-42
PB.7536.1	chr21	+	2924	20	novel_in_catalog	SLC37A1	novel	568	3	NA	NA	-42	-11	no_combination_of_known_junctions	TRUE	canonical	1	24866	junction_1	49294.54660943098	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	254	1855	40.0	-2	True	AATAAA	-22
PB.7536.2	chr21	+	3019	21	novel_in_catalog	SLC37A1	novel	568	3	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	1	21251	junction_1	52171.285734971105	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	339	1940	30.0	0	True	AATAAA	-32
PB.7536.3	chr21	+	2104	12	novel_in_catalog	SLC37A1	novel	568	3	NA	NA	-39	12158	combination_of_known_junctions	FALSE	canonical	1	21251	junction_1	61128.029017818866	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	338	1396	85.0	1	True	NA	NA
PB.7536.4	chr21	+	2906	21	novel_in_catalog	SLC37A1	novel	568	3	NA	NA	-31	-105	combination_of_known_junctions	FALSE	canonical	1	21251	junction_1	52171.285734971105	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	330	1931	25.0	9	True	CATAAA	-24
PB.7536.5	chr21	+	2968	20	full-splice_match	SLC37A1	ENST00000352133.2	3664	20	587	109	-23	-109	multi-exon	FALSE	canonical	1	80012	junction_1	41882.50659342724	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	396	1997	40.0	0	True	CATAAA	-20
PB.7536.6	chr21	+	4683	19	novel_not_in_catalog	SLC37A1	novel	568	3	NA	NA	8	-4466	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	68360.67284468298	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	365	1828	35.0	-8	True	NA	NA
PB.7536.7	chr21	+	2829	19	novel_not_in_catalog	SLC37A1	novel	3094	21	NA	NA	10443	-10	any annotated donor/acceptor	FALSE	canonical	1	5978	junction_1	53479.491281416806	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	65	1759	40.0	-8103	False	AATAAA	-23
PB.8244.24	chr3	-	3623	3	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	281	-862	any annotated donor/acceptor	FALSE	canonical	1	8231	junction_2	254196.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	167	504	521	1024	10.0	2	True	AGTAAA	-26
PB.1051.51	chr1	+	4902	19	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_2	193846.9025304617	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	743	3175	30.0	77	False	AATAAA	-20
PB.8244.26	chr3	-	3485	4	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	521	-862	any annotated donor/acceptor	FALSE	canonical	1	8231	junction_3	36798.486475518104	NA	3	NA	TRUE	NA	NA	NA	C	coding	167	504	383	886	10.0	643	False	AGTAAA	-26
PB.9171.7	chr5	-	2496	6	novel_not_in_catalog	SLC45A2	novel	1772	7	NA	NA	-19	-9	any annotated donor/acceptor	FALSE	canonical	1	2729	junction_3	7481.157541450388	NA	1	NA	TRUE	NA	NA	NA	C	coding	380	1143	81	1223	30.0	-10	True	NA	NA
PB.8244.20	chr3	-	3747	3	full-splice_match	CGGBP1	ENST00000309534.10	4495	3	50	698	50	-630	multi-exon	FALSE	canonical	1	516623	junction_1	26365.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	413	916	45.0	-44	True	ATTAAA	-14
PB.8244.21	chr3	-	3626	3	full-splice_match	CGGBP1	ENST00000309534.10	4495	3	49	820	49	-752	multi-exon	FALSE	canonical	1	516623	junction_1	26365.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	167	504	414	917	25.0	-45	True	AAGAAA	-18
PB.8244.22	chr3	-	3628	4	full-splice_match	CGGBP1	ENST00000482016.5	1147	4	60	-2541	40	-861	multi-exon	FALSE	canonical	1	83901	junction_1	227772.1933340903	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	525	1028	5.0	59	False	AGTAAA	-27
PB.7978.7	chr3	+	1988	4	full-splice_match	RPL15	ENST00000307839.9	2730	4	603	139	0	-18	multi-exon	FALSE	canonical	1	3978	junction_2	1766260.5367885754	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	37	651	40.0	0	True	AATAAA	-13
PB.402.15	chr1	+	2907	22	novel_not_in_catalog	OSBPL9	novel	3352	26	NA	NA	0	-67	any annotated donor/acceptor	FALSE	canonical	1	43	junction_6	297559.17109796486	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	557	2299	40.0	-24	True	ATTAAA	-17
PB.8244.28	chr3	-	2497	3	full-splice_match	CGGBP1	ENST00000309534.10	4495	3	43	1955	43	1515	multi-exon	FALSE	canonical	1	516623	junction_1	26365.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	420	923	20.0	62	False	AATAAA	-18
PB.8244.29	chr3	-	3606	1	full-splice_match	CGGBP1	ENST00000398392.2	5298	1	-1699	3391	40	11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	167	504	3033	3536	20.0	59	False	ATTAAA	-24
PB.5283.18	chr17	-	2599	13	full-splice_match	TMC6	ENST00000588087.5	2384	13	-28	-187	0	187	multi-exon	FALSE	canonical	1	97818	junction_12	123989.87128682013	NA	3	NA	TRUE	NA	NA	NA	C	coding	572	1719	222	1940	65.0	-4	True	AATATA	-4
PB.10649.2	chr7	-	4880	28	full-splice_match	ABCB1	ENST00000622132.4	4778	28	188	-290	188	290	multi-exon	FALSE	canonical	1	46909	junction_21	16130.301992534747	NA	1	NA	TRUE	NA	NA	NA	C	coding	1280	3843	138	3980	80.0	-2	True	TTTAAA	-39
PB.10649.3	chr7	-	4368	28	full-splice_match	ABCB1	ENST00000622132.4	4778	28	184	226	184	0	multi-exon	FALSE	canonical	1	46909	junction_21	16130.301992534747	NA	0	NA	TRUE	NA	NA	NA	C	coding	1280	3843	142	3984	25.0	-6	True	AATAAA	-22
PB.10649.1	chr7	-	5053	28	full-splice_match	ABCB1	ENST00000622132.4	4778	28	149	-424	149	424	multi-exon	FALSE	canonical	1	46909	junction_21	16130.301992534747	NA	0	NA	TRUE	NA	NA	NA	C	coding	1280	3843	177	4019	75.0	2207	False	TATAAA	-45
PB.10649.4	chr7	-	4222	28	full-splice_match	ABCB1	ENST00000622132.4	4778	28	187	369	187	-138	multi-exon	FALSE	canonical	1	46909	junction_21	16130.301992534747	NA	0	NA	TRUE	NA	NA	NA	C	coding	1280	3843	139	3981	55.0	-3	True	ATTAAA	-10
PB.7500.12	chr21	-	3146	21	novel_in_catalog	GART	novel	3341	22	NA	NA	-3	-34	no_combination_of_known_junctions	FALSE	canonical	1	13829	junction_4	220905.5052408778	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	95	2989	50.0	-6	True	AATAAA	-13
PB.7500.11	chr21	-	3495	21	novel_in_catalog	GART	novel	3341	22	NA	NA	3	0	intron_retention	FALSE	canonical	1	420544	junction_10	169756.9077802432	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	1148	3304	15.0	0	True	AATAGA	-43
PB.7500.10	chr21	-	3533	22	novel_in_catalog	GART	novel	3341	22	NA	NA	-7	-34	no_combination_of_known_junctions	FALSE	canonical	1	19879	junction_21	214413.89249320148	NA	0	NA	TRUE	NA	NA	NA	C	coding	1010	3033	344	3376	50.0	2	True	AATAAA	-13
PB.5499.2	chr18	+	2408	4	full-splice_match	ZNF532	ENST00000589131.5	550	4	-1	-1857	-1	7	multi-exon	FALSE	canonical	1	1718	junction_1	59752.709424389745	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	171	923	25.0	-14	True	AATAAA	-21
PB.7500.16	chr21	-	3247	22	full-splice_match	GART	ENST00000381815.8	3341	22	-2	96	-2	-94	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	1	NA	TRUE	NA	NA	NA	C	coding	1010	3033	118	3150	65.0	751	False	AAGAAA	-8
PB.7500.15	chr21	-	3416	22	full-splice_match	GART	ENST00000381839.7	3469	22	18	35	-1	-33	multi-exon	FALSE	canonical	1	2697	junction_21	216806.61645732465	NA	0	NA	TRUE	NA	NA	NA	C	coding	1010	3033	226	3258	45.0	8	True	AATAAA	-14
PB.11995.30	chrX	-	1339	10	incomplete-splice_match	SH3KBP1	ENST00000397821.7	4731	18	10	60973	10	-2880	3prime_fragment	FALSE	canonical	1	231353	junction_9	223032.8042397838	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1056	282	1337	25.0	8	True	NA	NA
PB.5166.11	chr17	+	2378	9	novel_not_in_catalog	METTL2A	novel	2537	9	NA	NA	6	1283	intron_retention	TRUE	non_canonical	0	0	junction_8	206271.8074773777	NA	3	NA	TRUE	NA	NA	NA	C	coding	242	729	621	1349	15.0	NA	False	NA	NA
PB.5166.10	chr17	+	2655	10	novel_not_in_catalog	METTL2A	novel	2537	9	NA	NA	-3	78	any annotated donor/acceptor	FALSE	canonical	1	20	junction_9	194854.50310202173	NA	13	NA	TRUE	NA	NA	NA	C	coding	378	1137	16	1152	30.0	NA	False	AATAAA	-19
PB.7179.11	chr20	-	4355	1	genic	FLRT3	novel	NA	NA	NA	NA	-13	-4353	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.7179.10	chr20	-	3379	3	novel_not_in_catalog	FLRT3	novel	4776	2	NA	NA	2	-1142	any annotated donor/acceptor	FALSE	canonical	1	16313	junction_1	12384.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	1010	2959	80.0	-1	True	NA	NA
PB.6381.7	chr2	+	3191	12	novel_in_catalog	ZNF512	novel	3543	13	NA	NA	3	-3	no_combination_of_known_junctions	FALSE	canonical	1	2082	junction_4	100122.03141662545	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	617	1561	25.0	1	True	AATAAA	-11
PB.6381.6	chr2	+	3386	14	novel_not_in_catalog	ZNF512	novel	3543	13	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	4373	junction_1	103691.03015995711	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	290	1756	25.0	1	True	AATAAA	-11
PB.6381.5	chr2	+	3214	12	novel_in_catalog	ZNF512	novel	3543	13	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	10738	junction_4	120013.25451496067	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	274	1584	25.0	0	True	AATAAA	-11
PB.6381.4	chr2	+	3401	14	full-splice_match	ZNF512	ENST00000355467.5	3541	14	16	124	2	-3	multi-exon	FALSE	canonical	1	87842	junction_2	86567.12954825781	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	68	1771	25.0	0	True	AATAAA	-11
PB.6200.3	chr19	+	3571	4	full-splice_match	ZNF813	ENST00000396403.8	6151	4	6	2574	-2	-2574	multi-exon	FALSE	canonical	1	137	junction_2	10239.032517229783	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	123	1976	15.0	-3	True	NA	NA
PB.6200.2	chr19	+	4543	4	full-splice_match	ZNF813	ENST00000396403.8	6151	4	-4	1612	-4	-1612	multi-exon	FALSE	canonical	1	137	junction_2	10239.032517229783	NA	8	NA	TRUE	NA	NA	NA	C	coding	617	1854	133	1986	90.0	-13	True	NA	NA
PB.6200.1	chr19	+	4193	4	full-splice_match	ZNF813	ENST00000396403.8	6151	4	-5	1963	-5	-1963	multi-exon	FALSE	canonical	1	137	junction_2	10239.032517229783	NA	2	NA	TRUE	NA	NA	NA	C	coding	617	1854	134	1987	25.0	-14	True	NA	NA
PB.1252.5	chr1	+	2778	6	novel_not_in_catalog	TRIM58	novel	3225	6	NA	NA	-8	19202	any annotated donor/acceptor	FALSE	canonical	1	18746	junction_5	144279.38920441826	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	57	1013	20.0	4	True	CATAAA	-19
PB.6200.4	chr19	+	3382	4	full-splice_match	ZNF813	ENST00000396403.8	6151	4	17	2752	9	2737	multi-exon	FALSE	canonical	1	137	junction_2	10239.032517229783	NA	2	NA	TRUE	NA	NA	NA	C	coding	617	1854	112	1965	15.0	8	True	NA	NA
PB.7077.9	chr2	+	4102	22	incomplete-splice_match	INPP5D	ENST00000445964.5	4845	27	79443	-2	17625	1	5prime_fragment	FALSE	canonical	0	0	junction_1	117357.76067653701	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	117	2906	0.0	-9224	False	AATAAA	-20
PB.11375.1	chr8	+	2386	10	novel_in_catalog	GSDMD	novel	2496	14	NA	NA	6	0	intron_retention	FALSE	canonical	1	316336	junction_1	97521.23082250246	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	144	2231	30.0	-1	True	AATAAA	-16
PB.5610.1	chr19	-	2035	5	full-splice_match	DOHH	ENST00000427575.5	2031	5	-5	1	-5	-1	multi-exon	FALSE	canonical	1	157212	junction_2	20492.176011529376	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	458	1366	15.0	-42	False	ATTAAA	-15
PB.11375.3	chr8	+	2582	9	novel_in_catalog	GSDMD	novel	2496	14	NA	NA	5	0	intron_retention	FALSE	canonical	1	316336	junction_1	102370.33403286325	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	114	1577	40.0	-11	True	AATAAA	-12
PB.11375.2	chr8	+	2856	8	novel_in_catalog	GSDMD	novel	2496	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	316336	junction_1	108718.50394744874	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	119	1582	30.0	-16	True	AATAAA	-16
PB.6864.8	chr2	+	3056	20	full-splice_match	AGPS	ENST00000264167.8	7764	20	121	4587	-3	831	multi-exon	FALSE	canonical	1	264071	junction_1	67760.20640587073	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	26	2002	30.0	-8	True	AGTAAA	-18
PB.11375.4	chr8	+	2802	8	novel_not_in_catalog	GSDMD	novel	2496	14	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_5	204124.4997368428	NA	4	NA	TRUE	NA	NA	NA	C	coding	487	1464	107	1570	30.0	-4	True	AATAAA	-16
PB.496.2	chr1	-	2089	15	incomplete-splice_match	TTLL7	ENST00000260505.12	7976	21	0	46212	0	1756	3prime_fragment	FALSE	canonical	1	38570	junction_14	32493.83339777954	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1710	379	2088	75.0	-10	True	AAAAAG	-10
PB.852.53	chr1	-	3631	31	incomplete-splice_match	COPA	ENST00000241704.7	4789	33	133	1948	6	-1440	3prime_fragment	FALSE	canonical	1	688780	junction_23	296870.8426344508	NA	0	NA	TRUE	NA	NA	NA	C	coding	1172	3519	98	3616	35.0	-21	True	AATAAA	-19
PB.7978.8	chr3	+	1892	4	full-splice_match	RPL15	ENST00000436146.2	605	4	0	-1287	0	-17	multi-exon	FALSE	canonical	1	1086	junction_1	1891091.9296103918	NA	0	NA	TRUE	NA	NA	NA	C	coding	44	135	420	554	40.0	0	True	AATAAA	-14
PB.6476.7	chr2	-	5460	16	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-86	-7	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_3	111774.33034674026	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	416	2848	30.0	1	True	AATAAA	-11
PB.828.1	chr1	-	5626	2	full-splice_match	AL590666.2	ENST00000448869.1	758	2	-26	-4842	-26	4842	multi-exon	FALSE	canonical	1	37444	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	972	1280	20.0	-11	True	AATAAA	-17
PB.9845.5	chr6	+	2790	7	novel_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	intron_retention	FALSE	canonical	1	3991824	junction_1	1088263.037756906	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	621	1343	15.0	-2	True	AATAAA	-18
PB.8516.7	chr3	-	2012	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	4	3577	4	1144	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	183	644	45.0	-53	False	ATTAAA	-27
PB.8516.6	chr3	-	3495	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	57	2041	8	-2041	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	130	591	15.0	0	True	AAGAAA	-13
PB.8295.19	chr3	-	1701	2	incomplete-splice_match	BTLA	ENST00000383680.4	726	4	-264	12313	-61	-8665	3prime_fragment	FALSE	canonical	1	116658	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	212	639	265	903	65.0	1	True	NA	NA
PB.8516.4	chr3	-	3917	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	86	1590	-3	-1590	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	101	562	45.0	-1	True	AATATA	-17
PB.8516.3	chr3	-	4606	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	4	983	4	-983	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	183	644	25.0	-53	False	NA	NA
PB.8516.2	chr3	-	4936	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	0	657	0	-657	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	187	648	100.0	-57	False	NA	NA
PB.8516.1	chr3	-	5534	5	full-splice_match	EIF5A2	ENST00000295822.6	5593	5	55	4	6	-4	multi-exon	FALSE	canonical	1	63472	junction_1	18200.692692861994	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	132	593	35.0	-2	True	AATAAA	-18
PB.902.2	chr1	-	5077	9	full-splice_match	ILDR2	ENST00000529071.5	2566	9	63	-2574	63	2574	multi-exon	FALSE	canonical	1	3292	junction_6	6911.877422234859	NA	1	NA	TRUE	NA	NA	NA	C	coding	620	1863	152	2014	25.0	41	True	ATTAAA	-14
PB.6713.4	chr2	+	2554	3	full-splice_match	TMEM177	ENST00000409951.1	1216	3	-26	-1312	7	1312	multi-exon	FALSE	canonical	1	4265	junction_2	33943.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	123	449	25.0	7	True	NA	NA
PB.10857.1	chr7	+	1815	2	incomplete-splice_match	BPGM	ENST00000344924.7	1753	3	-24	16706	-24	1366	3prime_fragment	FALSE	canonical	1	235271	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	216	866	10.0	-367	False	AATAAA	-20
PB.10857.3	chr7	+	1729	3	full-splice_match	BPGM	ENST00000344924.7	1753	3	24	0	1	0	multi-exon	FALSE	canonical	1	235271	junction_1	57785.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	168	947	15.0	-3	True	AATAAA	-37
PB.10857.2	chr7	+	2056	4	full-splice_match	BPGM	ENST00000393132.2	2051	4	-6	1	-6	-1	multi-exon	FALSE	canonical	1	8960	junction_1	160060.57415310686	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	496	1275	15.0	-10	True	AATAAA	-36
PB.828.2	chr1	-	3257	1	full-splice_match	AL365181.3	ENST00000605886.1	3222	1	-35	0	-35	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	6755	False	AATAAA	-16
PB.6094.10	chr19	+	2411	7	novel_not_in_catalog	CALM3	novel	702	6	NA	NA	15	-3	intron_retention	FALSE	canonical	1	12177	junction_2	2967805.419430361	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	445	786	5.0	15	True	AATAAA	-14
PB.6476.1	chr2	-	5505	17	full-splice_match	PPP4R3B	ENST00000616407.1	4385	17	-34	-1086	-8	-1	multi-exon	FALSE	canonical	1	146496	junction_8	100630.56562013026	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	338	2887	20.0	-19	True	AATAAA	-17
PB.8533.7	chr3	-	2242	10	full-splice_match	GNB4	ENST00000232564.7	6434	10	110	4082	-4	678	multi-exon	FALSE	canonical	1	130618	junction_9	55707.21611633541	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	178	1200	35.0	-11	True	TATAAA	-16
PB.1367.2	chr10	+	1702	6	novel_in_catalog	CREM	novel	1030	3	NA	NA	-2	25	combination_of_known_junctions	FALSE	canonical	1	62090	junction_4	83847.20022421738	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	253	915	60.0	-355	False	AATAAA	-11
PB.1367.3	chr10	+	1951	6	novel_in_catalog	CREM	novel	1030	3	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	62090	junction_4	83847.20022421738	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	224	886	20.0	-26	True	TATAAA	-12
PB.8865.2	chr4	+	8487	47	full-splice_match	PTPN13	ENST00000427191.6	8487	47	0	0	0	0	multi-exon	FALSE	canonical	1	52878	junction_1	52233.375772939	NA	0	NA	TRUE	NA	NA	NA	C	coding	2466	7401	481	7881	45.0	-4	True	AATAAA	-27
PB.1367.1	chr10	+	1767	6	novel_in_catalog	CREM	novel	1030	3	NA	NA	-2	25	combination_of_known_junctions	FALSE	canonical	1	33221	junction_3	115149.62638480423	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	444	980	60.0	-355	False	AATAAA	-11
PB.1367.6	chr10	+	2049	7	novel_in_catalog	CREM	novel	1030	3	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	33221	junction_4	96636.86303099984	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	135	986	20.0	-25	True	TATAAA	-10
PB.1367.7	chr10	+	1280	3	full-splice_match	CREM	ENST00000474931.5	626	3	7	-661	0	25	multi-exon	FALSE	canonical	1	31850	junction_1	127859.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	155	493	60.0	7	True	AATAAA	-11
PB.1367.4	chr10	+	1961	7	novel_in_catalog	CREM	novel	1030	3	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	1	5220	junction_4	102660.30374397669	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	198	896	20.0	0	True	TATAAA	-12
PB.1367.5	chr10	+	1533	5	novel_in_catalog	CREM	novel	1030	3	NA	NA	15	38	combination_of_known_junctions	FALSE	canonical	1	39283	junction_1	111671.89811312199	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	386	733	65.0	3	True	AATAAA	-24
PB.6713.5	chr2	+	2991	2	novel_in_catalog	TMEM177	novel	1346	2	NA	NA	1	2107	no_combination_of_known_junctions	FALSE	canonical	1	4003	junction_1	0.0	NA	25	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-9	True	NA	NA
PB.5516.15	chr18	-	2185	10	novel_not_in_catalog	CDH19	novel	6341	12	NA	NA	-2	1042	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	5931.41924181913	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	300	1637	25.0	-8	True	AATAAA	-16
PB.828.3	chr1	-	3020	3	novel_not_in_catalog	AL590666.2	novel	758	2	NA	NA	-52	4820	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	18722.0	NA	9	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	9383	False	GGGGCT	-28
PB.5516.12	chr18	-	2375	11	incomplete-splice_match	CDH19	ENST00000262150.6	6341	12	-24	7682	-20	-3720	3prime_fragment	FALSE	canonical	1	10770	junction_10	2126.8120956022417	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	318	2153	35.0	-1	True	AGTAAA	-31
PB.5516.13	chr18	-	2331	11	incomplete-splice_match	CDH19	ENST00000579658.5	2588	12	-3	3952	-3	-3719	3prime_fragment	FALSE	canonical	1	1109	junction_1	4356.300404012561	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	301	1926	35.0	-9	True	AGTAAA	-32
PB.9851.2	chr6	+	2571	9	full-splice_match	ATAT1	ENST00000318999.11	2611	9	16	24	2	-24	multi-exon	FALSE	canonical	1	40212	junction_7	72189.95531365497	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	29	931	80.0	-16	True	AATAAA	-42
PB.9851.3	chr6	+	1467	13	full-splice_match	ATAT1	ENST00000376485.8	1476	13	6	3	6	-3	multi-exon	FALSE	canonical	1	35417	junction_10	76152.21567739437	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	25	1290	40.0	-12	True	AATAAA	-20
PB.9851.1	chr6	+	2661	10	full-splice_match	ATAT1	ENST00000376483.8	2646	10	-25	10	-5	-10	multi-exon	FALSE	canonical	1	104104	junction_9	53420.930180576455	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	36	1007	55.0	-23	True	AAAAAG	-7
PB.12128.1	chrX	+	3308	3	full-splice_match	FOXO4	ENST00000374259.7	3301	3	-19	12	-19	-12	multi-exon	FALSE	canonical	1	171496	junction_1	16834.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	505	1518	352	1869	20.0	2	True	NA	NA
PB.9851.4	chr6	+	3024	12	novel_in_catalog	ATAT1	novel	2611	9	NA	NA	0	-4	intron_retention	FALSE	canonical	1	35417	junction_9	77918.75223643308	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	11	694	40.0	2	True	AATAAA	-19
PB.8127.13	chr3	+	3231	17	incomplete-splice_match	RBM6	ENST00000443081.5	4010	21	112	10869	2	-63	3prime_fragment	FALSE	canonical	1	37186	junction_2	200137.14416758972	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2424	808	3231	60.0	1	True	NA	NA
PB.5516.11	chr18	-	4564	11	incomplete-splice_match	CDH19	ENST00000262150.6	6341	12	-21	5490	-17	-1528	3prime_fragment	FALSE	canonical	1	10770	junction_10	2126.8120956022417	NA	9	NA	TRUE	NA	NA	NA	C	coding	611	1836	315	2150	40.0	2	True	AATAAA	-13
PB.4471.2	chr16	-	2114	10	full-splice_match	TK2	ENST00000544898.5	3441	10	-39	1366	-32	-1	multi-exon	FALSE	canonical	1	104505	junction_9	67381.04113963904	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	94	891	10.0	2327	False	AATAAA	-15
PB.4471.1	chr16	-	3423	10	full-splice_match	TK2	ENST00000544898.5	3441	10	-52	70	23	-70	multi-exon	FALSE	canonical	1	104505	junction_9	67381.04113963904	NA	15	NA	TRUE	NA	NA	NA	C	coding	265	798	107	904	40.0	-6	True	AATATA	-16
PB.10353.14	chr7	+	5747	20	novel_in_catalog	SUN1	novel	520	4	NA	NA	-9	0	intron_retention	FALSE	canonical	1	272684	junction_1	146679.02926324078	NA	4	NA	TRUE	NA	NA	NA	B	coding	460	1383	2794	4176	40.0	-9	True	AATAAA	-22
PB.8871.7	chr4	+	2169	6	incomplete-splice_match	SPP1	ENST00000395080.7	1473	7	26	-29	0	0	intron_retention	FALSE	canonical	1	1436072	junction_5	399814.5078000047	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	102	680	30.0	0	True	AATAAA	-18
PB.8871.6	chr4	+	2781	5	novel_in_catalog	SPP1	novel	1558	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2275732	junction_2	238834.09502662616	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	1660	2352	30.0	0	True	AATAAA	-17
PB.8871.5	chr4	+	1042	6	full-splice_match	SPP1	ENST00000237623.11	1581	6	47	492	0	136	multi-exon	FALSE	canonical	1	557466	junction_4	811482.1724041508	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	102	1004	60.0	0	True	ATTAAA	-38
PB.8871.4	chr4	+	1084	7	full-splice_match	SPP1	ENST00000395080.7	1473	7	26	363	0	136	multi-exon	FALSE	canonical	1	1436072	junction_5	467655.7919361977	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	102	1046	60.0	0	True	ATTAAA	-38
PB.8871.3	chr4	+	1395	6	full-splice_match	SPP1	ENST00000360804.4	1196	6	0	-199	0	0	multi-exon	FALSE	canonical	1	80194	junction_3	1006673.8978679441	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	102	965	30.0	0	True	AATAAA	-18
PB.8871.2	chr4	+	1521	6	full-splice_match	SPP1	ENST00000237623.11	1581	6	44	16	-3	0	multi-exon	FALSE	canonical	1	557466	junction_4	811482.1724041508	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	105	1007	35.0	-3	True	AATAAA	-22
PB.8871.1	chr4	+	1475	7	full-splice_match	SPP1	ENST00000395080.7	1473	7	26	-28	0	-1	multi-exon	FALSE	canonical	1	1436072	junction_5	467655.7919361977	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	102	1046	30.0	0	True	AATAAA	-17
PB.8127.10	chr3	+	3592	20	novel_in_catalog	RBM6	novel	2260	17	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	134939	junction_5	211091.92534223688	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	2080	3477	15.0	-6	True	AATAAA	-16
PB.9872.3	chr6	+	1670	4	full-splice_match	TNF	ENST00000449264.2	1676	4	-2	8	-2	-8	multi-exon	FALSE	canonical	1	159745	junction_1	19583.495778049662	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	178	879	40.0	0	True	AATAAA	-11
PB.9872.2	chr6	+	2276	3	novel_in_catalog	TNF	novel	1676	4	NA	NA	-2	-8	intron_retention	FALSE	canonical	1	165846	junction_2	19077.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	850	1485	40.0	0	True	AATAAA	-11
PB.9872.1	chr6	+	2764	1	genic	TNF	novel	NA	NA	NA	NA	-2	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	179	540	1434	1973	40.0	0	True	AATAAA	-11
PB.5001.1	chr17	-	1766	2	full-splice_match	CCR10	ENST00000332438.4	1773	2	2	5	2	-5	multi-exon	FALSE	canonical	1	20832	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	362	1089	19	1107	35.0	1	True	AAGAAA	-19
PB.5516.16	chr18	-	2017	9	novel_in_catalog	CDH19	novel	6341	12	NA	NA	-36	-26	combination_of_known_junctions	FALSE	canonical	1	1755	junction_1	4626.461978391263	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	334	1671	75.0	-3	True	NA	NA
PB.10045.1	chr6	+	2042	3	full-splice_match	BAG2	ENST00000370693.5	6651	3	-61	4670	-61	-4670	multi-exon	FALSE	canonical	1	297705	junction_1	63407.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	434	1069	30.0	-482	False	NA	NA
PB.11575.3	chr9	-	3979	2	intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	coding	223	672	408	1079	35.0	NA	False	NA	NA
PB.11575.2	chr9	-	4054	1	full-splice_match	AL512625.2	ENST00000417533.2	1164	1	-88	-2802	-88	2802	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	223	672	429	1100	20.0	NA	False	NA	NA
PB.11575.1	chr9	-	4111	1	full-splice_match	AL512625.2	ENST00000417533.2	1164	1	-56	-2891	-56	2891	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	223	672	397	1068	40.0	NA	False	NA	NA
PB.10158.9	chr6	+	3502	8	novel_in_catalog	AMD1	novel	3438	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	272137	junction_2	470479.6429063274	NA	4	NA	TRUE	NA	NA	NA	C	coding	244	735	322	1056	15.0	0	True	AATAAA	-26
PB.11040.2	chr8	-	2466	4	full-splice_match	STC1	ENST00000290271.6	3883	4	1	1416	1	583	multi-exon	FALSE	canonical	1	182667	junction_3	26558.860747822415	NA	3	NA	TRUE	NA	NA	NA	C	coding	247	744	284	1027	80.0	-1	True	NA	NA
PB.10158.8	chr6	+	3518	10	novel_not_in_catalog	AMD1	novel	3438	9	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	3057	junction_3	574416.7466595041	NA	10	2	TRUE	NA	NA	NA	C	coding	217	654	771	1424	15.0	0	True	AATAAA	-26
PB.9239.2	chr5	-	1758	2	novel_not_in_catalog	PDE4D	novel	558	3	NA	NA	-41	-512414	any annotated donor/acceptor	FALSE	canonical	1	7823	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	284	855	227	1081	65.0	-45	False	NA	NA
PB.7902.9	chr3	+	2071	8	full-splice_match	TRNT1	ENST00000251607.10	2276	8	32	173	-3	-173	multi-exon	FALSE	canonical	1	147808	junction_1	32336.396590990098	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	158	1375	30.0	-3	True	AATAAA	-22
PB.5033.2	chr17	+	2596	10	full-splice_match	C17orf53	ENST00000585683.5	2529	10	124	-191	10	0	multi-exon	FALSE	canonical	1	39344	junction_1	21058.25506705472	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	112	2052	0.0	0	True	AATAAA	-14
PB.5033.1	chr17	+	2510	8	novel_not_in_catalog	C17orf53	novel	2725	10	NA	NA	-17	1	any annotated donor/acceptor	TRUE	canonical	1	6541	junction_5	27667.428823696027	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	255	1817	0.0	-143	False	AATAAA	-15
PB.11040.1	chr8	-	2830	4	full-splice_match	STC1	ENST00000290271.6	3883	4	1	1052	1	947	multi-exon	FALSE	canonical	1	182667	junction_3	26558.860747822415	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	284	1027	70.0	-1	True	NA	NA
PB.5190.2	chr17	-	2889	11	full-splice_match	PLEKHM1P1	ENST00000582986.5	5014	11	-1	2126	-1	414	multi-exon	FALSE	canonical	1	8410	junction_9	52237.85566196223	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	883	2445	40.0	2	True	ATTAAA	-42
PB.5190.1	chr17	-	3140	12	incomplete-splice_match	PLEKHM1P1	ENST00000578036.5	4318	18	-19	5586	-4	414	3prime_fragment	FALSE	canonical	1	39178	junction_8	41780.544653429184	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	1134	2696	40.0	-1	True	ATTAAA	-42
PB.724.7	chr1	+	2691	18	full-splice_match	TARS2	ENST00000369064.7	2729	18	3	35	0	-31	multi-exon	FALSE	canonical	1	184351	junction_7	57636.552150277224	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	32	2188	75.0	-15	True	NA	NA
PB.7902.5	chr3	+	3289	9	novel_in_catalog	TRNT1	novel	2276	8	NA	NA	-8	1536	no_combination_of_known_junctions	FALSE	canonical	1	4424	junction_8	72195.89820715232	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	163	1380	85.0	-8	True	NA	NA
PB.724.5	chr1	+	2603	17	novel_in_catalog	TARS2	novel	2188	14	NA	NA	-2	-25	combination_of_known_junctions	FALSE	canonical	1	29133	junction_14	86602.39110286953	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	40	2094	70.0	-23	True	NA	NA
PB.724.4	chr1	+	2541	18	full-splice_match	TARS2	ENST00000369064.7	2729	18	-9	197	-6	121	multi-exon	FALSE	canonical	1	184351	junction_7	57636.552150277224	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	44	2200	65.0	-27	True	NA	NA
PB.5382.1	chr18	-	1852	1	genic	AP001793.1	novel	NA	NA	NA	NA	192	875	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.724.2	chr1	+	2644	17	novel_in_catalog	TARS2	novel	2188	14	NA	NA	-12	-31	combination_of_known_junctions	FALSE	canonical	1	9602	junction_5	90162.68037516184	NA	3	1	TRUE	NA	NA	NA	C	coding	344	1035	1107	2141	75.0	-33	True	NA	NA
PB.724.1	chr1	+	2574	17	novel_in_catalog	TARS2	novel	2188	14	NA	NA	-24	-31	no_combination_of_known_junctions	FALSE	canonical	1	18802	junction_7	84768.48451222896	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	62	2071	75.0	-45	False	NA	NA
PB.7902.4	chr3	+	3429	10	full-splice_match	TRNT1	ENST00000434583.5	1871	10	-23	-1535	-9	1535	multi-exon	FALSE	canonical	1	28041	junction_9	76071.53772162972	NA	4	NA	TRUE	NA	NA	NA	C	coding	405	1218	164	1381	85.0	-9	True	NA	NA
PB.10714.11	chr7	-	2620	3	full-splice_match	ZNF3	ENST00000487620.1	2660	3	40	0	5	0	multi-exon	FALSE	canonical	1	22569	junction_2	103120.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	365	1654	90.0	0	True	NA	NA
PB.7902.7	chr3	+	2131	8	novel_not_in_catalog	TRNT1	novel	2276	8	NA	NA	-8	-62	any annotated donor/acceptor	FALSE	canonical	1	1114	junction_4	94894.22639218588	NA	2	1	TRUE	NA	NA	NA	C	coding	152	459	76	534	35.0	-8	True	ATTAAA	-20
PB.724.9	chr1	+	2445	16	full-splice_match	TARS2	ENST00000606933.5	2162	16	0	-283	0	-31	multi-exon	FALSE	canonical	1	79384	junction_7	75274.93062444864	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	32	1942	75.0	-15	True	NA	NA
PB.724.8	chr1	+	2396	18	full-splice_match	TARS2	ENST00000369064.7	2729	18	2	331	-1	-13	multi-exon	FALSE	canonical	1	184351	junction_7	57636.552150277224	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	33	2189	60.0	-16	True	AATGAA	-6
PB.1391.1	chr10	-	2634	1	intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	35	NA	NA	NA	NA	NA	A	coding	73	222	350	571	15.0	-87	False	NA	NA
PB.10774.1	chr7	+	3432	1	antisense	novelGene_NAMPT_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7902.1	chr3	+	1847	8	full-splice_match	TRNT1	ENST00000251607.10	2276	8	7	422	7	-422	multi-exon	FALSE	canonical	1	147808	junction_1	32336.396590990098	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	183	1400	65.0	-143	False	AATAAA	-10
PB.11104.8	chr8	+	3867	12	novel_in_catalog	GPAT4	novel	572	2	NA	NA	1	397	intron_retention	FALSE	canonical	1	250447	junction_8	150110.77418618844	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	2202	3077	25.0	1	True	NA	NA
PB.2293.1	chr11	-	2197	10	full-splice_match	BUD13	ENST00000260210.4	2196	10	-8	7	-8	-7	multi-exon	FALSE	canonical	1	123701	junction_9	50736.23689846621	NA	0	NA	TRUE	NA	NA	NA	A	coding	619	1860	33	1892	35.0	-10	True	AATAAA	-18
PB.10126.1	chr6	-	2180	13	full-splice_match	CCNC	ENST00000520371.5	2186	13	50	-44	-1	44	multi-exon	FALSE	canonical	1	29522	junction_1	278551.1564489646	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	137	985	30.0	-4	True	ATTAAA	-18
PB.10126.2	chr6	-	2043	11	novel_in_catalog	CCNC	novel	2473	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	4150	junction_7	331851.9242074694	NA	5	2	TRUE	NA	NA	NA	C	coding	152	459	418	876	25.0	-3	True	AATAAA	-19
PB.10126.3	chr6	-	1823	7	novel_in_catalog	CCNC	novel	2473	12	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	846	junction_2	284273.85640166106	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	137	520	25.0	-4	True	AATAAA	-19
PB.10126.5	chr6	-	3547	11	novel_in_catalog	CCNC	novel	2473	12	NA	NA	3	-2	intron_retention	FALSE	canonical	1	6812	junction_3	300835.93749244785	NA	9	NA	TRUE	NA	NA	NA	C	coding	101	306	2076	2381	25.0	-16	True	AATAAA	-18
PB.10126.6	chr6	-	3476	10	novel_in_catalog	CCNC	novel	2473	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	427995	junction_9	176577.50949024557	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	134	613	25.0	-1	True	AATAAA	-18
PB.10714.10	chr7	-	2593	6	full-splice_match	ZNF3	ENST00000299667.8	2799	6	17	189	4	0	multi-exon	FALSE	canonical	1	162950	junction_4	23976.35366439192	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	287	1627	90.0	-1	True	NA	NA
PB.10126.8	chr6	-	2056	12	novel_not_in_catalog	CCNC	novel	2473	12	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	261015.58104966496	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	294	890	25.0	0	True	AATAAA	-18
PB.10126.9	chr6	-	2242	11	incomplete-splice_match	CCNC	ENST00000520429.5	2473	12	312	1421	1	-21	3prime_fragment	FALSE	canonical	1	427995	junction_10	175992.07576876864	NA	2	NA	TRUE	NA	NA	NA	C	coding	273	822	135	956	70.0	-2	True	NA	NA
PB.7902.2	chr3	+	2579	10	novel_not_in_catalog	TRNT1	novel	2276	8	NA	NA	-11	2557	intron_retention	FALSE	canonical	1	5438	junction_9	80778.05017102169	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	166	1383	5.0	-11	True	AATAAA	-22
PB.6417.8	chr2	+	2473	10	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	5	-2	intron_retention	FALSE	canonical	1	2703	junction_8	68111.12537030845	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	36	680	10.0	13	True	AAGAAA	-13
PB.4105.13	chr15	+	5629	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	2	-6	intron_retention	FALSE	canonical	1	1128	junction_5	103796.20301061831	NA	3	NA	TRUE	NA	NA	NA	C	coding	374	1125	860	1984	35.0	-21	True	AATAAA	-35
PB.4105.12	chr15	+	2111	3	incomplete-splice_match	MEF2A	ENST00000559036.5	685	4	0	10961	0	-10751	3prime_fragment	FALSE	canonical	1	114418	junction_1	46773.5	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-23	True	NA	NA
PB.4105.11	chr15	+	2325	10	full-splice_match	MEF2A	ENST00000338042.10	5464	10	41	3098	0	0	multi-exon	FALSE	canonical	1	30270	junction_1	85314.36942939801	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	312	1772	85.0	-23	True	NA	NA
PB.4105.10	chr15	+	2349	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	-11	516	0	-58	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	394	1854	15.0	-23	True	CATAAA	-16
PB.4105.17	chr15	+	5438	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	33	-2617	23	-7	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	7	1	TRUE	NA	NA	NA	C	coding	486	1461	350	1810	45.0	21	True	AATAAA	-18
PB.4105.16	chr15	+	5714	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	3	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	106172.90516483241	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	608	2068	35.0	-20	True	AATAAA	-36
PB.4105.15	chr15	+	2374	9	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	2	-18080	any annotated donor/acceptor	FALSE	canonical	1	11621	junction_8	88355.01927416178	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	381	1253	45.0	-10	True	NA	NA
PB.4105.14	chr15	+	2765	11	novel_in_catalog	MEF2A	novel	732	4	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	1	10613	junction_10	102239.20579601545	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	310	1770	45.0	-21	True	AATAAA	-17
PB.9553.37	chr5	-	3210	1	novel_in_catalog	CSNK1A1	novel	6067	10	NA	NA	-6473	8650	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.9553.36	chr5	-	2063	9	incomplete-splice_match	CSNK1A1	ENST00000377843.6	2559	10	132	8950	-23	0	3prime_fragment	FALSE	canonical	1	567729	junction_1	417275.28000102943	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	457	1467	35.0	15	True	AATAAA	-17
PB.4105.19	chr15	+	5675	11	novel_in_catalog	MEF2A	novel	732	4	NA	NA	0	-6	intron_retention	FALSE	canonical	1	71885	junction_5	78665.34691215694	NA	3	NA	TRUE	NA	NA	NA	C	coding	374	1125	922	2046	45.0	-12	True	AATAAA	-19
PB.4105.18	chr15	+	2621	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	106172.90516483241	NA	16	2	TRUE	NA	NA	NA	C	coding	486	1461	608	2068	85.0	-20	True	NA	NA
PB.9553.33	chr5	-	1727	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	108	724	-47	-32	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	481	1494	10.0	-9	True	NA	NA
PB.9553.32	chr5	-	1688	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-43	4422	-43	-31	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	477	1454	10.0	-5	True	NA	NA
PB.9553.31	chr5	-	2142	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	149	268	-6	-110	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	440	1453	55.0	104	False	NA	NA
PB.9553.30	chr5	-	2123	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-23	3967	-23	-110	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	457	1434	55.0	15	True	NA	NA
PB.3431.9	chr14	+	2023	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	84	1888	2	4	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	42	884	15.0	-11	True	TTTAAA	-38
PB.6417.4	chr2	+	2311	9	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	11	8	intron_retention	FALSE	canonical	1	130271	junction_1	26659.583769256413	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	65	709	50.0	-16	True	AATAAA	-27
PB.11254.3	chr8	+	4070	5	incomplete-splice_match	CPQ	ENST00000220763.9	1947	8	131	174425	-13	-123634	3prime_fragment	FALSE	canonical	1	119803	junction_1	98639.55136886015	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	80	1063	30.0	-6	True	AATAAA	-14
PB.11254.2	chr8	+	1859	8	full-splice_match	CPQ	ENST00000220763.9	1947	8	87	1	-57	-1	multi-exon	FALSE	canonical	1	119803	junction_1	75748.12672729192	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	124	1542	20.0	-50	True	AATAAA	-18
PB.11254.1	chr8	+	1903	9	novel_in_catalog	CPQ	novel	1947	8	NA	NA	-61	-1	combination_of_known_junctions	FALSE	canonical	1	1055	junction_1	143427.78751496342	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	168	1586	20.0	-54	True	AATAAA	-18
PB.10635.9	chr7	+	4597	17	novel_in_catalog	PHTF2	novel	5198	20	NA	NA	19	-1	no_combination_of_known_junctions	FALSE	canonical	1	2070	junction_1	64662.7609135648	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	419	2251	15.0	4	True	AATAAA	-15
PB.10635.8	chr7	+	4522	17	novel_in_catalog	PHTF2	novel	5198	20	NA	NA	-32	-1	no_combination_of_known_junctions	FALSE	canonical	1	5052	junction_9	65015.95650945885	NA	3	NA	TRUE	NA	NA	NA	C	coding	674	2025	152	2176	15.0	-22	True	AATAAA	-15
PB.10635.3	chr7	+	4719	17	novel_in_catalog	PHTF2	novel	5198	20	NA	NA	-46	-1	combination_of_known_junctions	TRUE	canonical	1	11874	junction_12	61387.205604949755	NA	2	NA	TRUE	NA	NA	NA	C	coding	703	2112	262	2373	15.0	-225	False	AATAAA	-15
PB.10635.2	chr7	+	1942	12	full-splice_match	PHTF2	ENST00000424760.5	1977	12	41	-6	-34	6	multi-exon	FALSE	canonical	1	130381	junction_1	38110.14889123889	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	154	1794	10.0	-24	True	AATAAA	-21
PB.10635.1	chr7	+	4723	18	full-splice_match	PHTF2	ENST00000307305.12	4793	18	71	-1	-12	1	multi-exon	FALSE	canonical	1	114643	junction_13	44950.35969618719	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	132	2375	10.0	-2	True	AATAAA	-17
PB.11063.10	chr8	+	2183	11	novel_not_in_catalog	HMBOX1	novel	3184	10	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	554	junction_9	46253.88904989504	NA	8	1	TRUE	NA	NA	NA	B	coding	385	1158	111	1268	95.0	-1119	False	NA	NA
PB.10635.7	chr7	+	2682	10	novel_not_in_catalog	PHTF2	novel	5198	20	NA	NA	17	24	any annotated donor/acceptor	FALSE	canonical	1	6385	junction_5	98779.69703909707	NA	18	1	TRUE	NA	NA	NA	C	coding	215	648	692	1339	40.0	-141	False	AATAAA	-25
PB.10635.6	chr7	+	4667	17	novel_in_catalog	PHTF2	novel	5198	20	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	11806	junction_10	63819.925897715075	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	205	2319	10.0	30	True	AATAAA	-17
PB.10635.5	chr7	+	5078	18	full-splice_match	PHTF2	ENST00000307305.12	4793	18	-14	-271	-1	-7	multi-exon	FALSE	canonical	1	114643	junction_13	44950.35969618719	NA	2	NA	TRUE	NA	NA	NA	C	coding	747	2244	217	2460	30.0	18	True	ATTAAA	-11
PB.10635.4	chr7	+	1949	11	incomplete-splice_match	PHTF2	ENST00000424760.5	1977	12	-57	2276	-36	170	3prime_fragment	FALSE	canonical	1	130381	junction_1	39301.01153418319	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	252	1616	80.0	-17	True	AATAAA	-41
PB.1034.1	chr1	-	1818	6	full-splice_match	CSRP1	ENST00000340006.6	1952	6	136	-2	0	0	multi-exon	FALSE	canonical	1	1956056	junction_5	445184.7339877683	NA	0	NA	TRUE	NA	NA	NA	A	coding	193	582	56	637	20.0	-1	True	AATAAA	-15
PB.6417.3	chr2	+	1788	11	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	10	3	combination_of_known_junctions	FALSE	canonical	1	31729	junction_10	51109.20133410421	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	66	1391	0.0	-17	True	AAGAAA	-18
PB.175.6	chr1	+	1678	12	full-splice_match	NIPAL3	ENST00000339255.2	1676	12	-11	9	0	-9	multi-exon	FALSE	canonical	1	52807	junction_11	74852.33221516607	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	360	1466	75.0	1	True	AAGAAA	-15
PB.1385.1	chr10	-	1882	2	full-splice_match	AL137026.2	ENST00000437014.1	841	2	-5	-1036	-5	1036	multi-exon	FALSE	canonical	1	1673	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.11647.13	chr9	-	3238	13	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1197	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	88733.70907180026	NA	13	1	TRUE	NA	NA	NA	B	coding	899	2697	540	3236	25.0	-1	True	AAAAAG	-22
PB.5662.7	chr19	+	5496	19	novel_in_catalog	AC008878.3	novel	4964	22	NA	NA	12318	7	intron_retention	FALSE	canonical	1	113585	junction_1	56750.961006193924	NA	1	NA	TRUE	NA	NA	NA	B	coding	690	2073	168	2240	10.0	7	True	AATAAA	-21
PB.907.1	chr1	-	2729	1	genic	AL031733.2	novel	NA	NA	NA	NA	562	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	5	True	NA	NA
PB.5534.4	chr18	-	4841	4	full-splice_match	MBP	ENST00000397860.7	4844	4	-13	16	-13	-16	multi-exon	FALSE	canonical	1	139552	junction_3	61585.83981728267	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	229	822	35.0	0	True	ATTAAA	-15
PB.6497.19	chr2	+	2479	19	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	9	-72	combination_of_known_junctions	FALSE	canonical	1	6325	junction_1	95668.28302015613	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2166	312	2477	60.0	-18	True	AATACA	-10
PB.6497.18	chr2	+	2721	13	incomplete-splice_match	EHBP1	ENST00000431489.5	5076	23	-21	97547	9	-7177	3prime_fragment	FALSE	canonical	1	135139	junction_1	45206.83297971177	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2094	628	2721	60.0	-18	True	NA	NA
PB.6497.15	chr2	+	4686	22	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	3	-5	intron_retention	FALSE	canonical	1	3104	junction_3	112626.75563057156	NA	0	NA	TRUE	NA	NA	NA	C	coding	1128	3387	318	3704	25.0	-24	True	AATAAA	-19
PB.9064.21	chr4	+	4061	12	full-splice_match	CLCN3	ENST00000613795.4	5874	12	156	1657	156	985	multi-exon	FALSE	canonical	1	131041	junction_1	103337.90880167903	NA	2	NA	TRUE	NA	NA	NA	C	coding	791	2376	153	2528	80.0	12	True	AATAAA	-26
PB.6497.17	chr2	+	3220	18	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	6	-72	intron_retention	FALSE	canonical	1	6325	junction_1	86746.90588409288	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2904	315	3218	60.0	-21	True	AATACA	-10
PB.9678.4	chr5	-	3055	3	novel_in_catalog	MGAT1	novel	8863	3	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	4039	junction_2	105116.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	632	1969	35.0	-12	True	AATAAA	-15
PB.10110.3	chr6	-	6961	37	incomplete-splice_match	MDN1	ENST00000369393.7	18413	102	130942	286	-16207	-10	5prime_fragment	TRUE	canonical	1	95114	junction_29	72707.85444698497	NA	0	NA	TRUE	NA	NA	NA	B	coding	1891	5676	66	5741	20.0	1186	False	ATTAAA	-16
PB.5534.6	chr18	-	4713	3	novel_in_catalog	MBP	novel	2281	7	NA	NA	39	-16	intron_retention	FALSE	canonical	1	757	junction_2	143217.0	NA	12	1	TRUE	NA	NA	NA	C	coding	64	195	500	694	35.0	1476	False	ATTAAA	-15
PB.6497.13	chr2	+	4786	23	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	1	-3	intron_retention	FALSE	canonical	1	6325	junction_1	96347.60297674061	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	320	3802	25.0	-26	True	AATAAA	-21
PB.9064.20	chr4	+	5748	12	full-splice_match	CLCN3	ENST00000613795.4	5874	12	128	-2	128	2	multi-exon	FALSE	canonical	1	131041	junction_1	103337.90880167903	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	181	2556	20.0	0	True	ATTAAA	-18
PB.9064.23	chr4	+	3787	13	novel_in_catalog	CLCN3	novel	582	5	NA	NA	182	661	intron_retention	FALSE	canonical	1	50478	junction_12	146704.91801818446	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	127	2646	55.0	4	True	ATTAAA	-7
PB.9064.22	chr4	+	3574	13	novel_in_catalog	CLCN3	novel	582	5	NA	NA	173	439	intron_retention	FALSE	canonical	1	50478	junction_12	146704.91801818446	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	136	2655	45.0	-5	True	AATAAA	-19
PB.8589.12	chr3	+	4401	8	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	437	junction_1	251702.57745990442	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	433	1653	15.0	-320	False	AATAAA	-18
PB.5534.1	chr18	-	2168	6	full-splice_match	MBP	ENST00000397866.8	2145	6	-6	-17	-3	0	multi-exon	FALSE	canonical	1	4090024	junction_2	1245731.599530268	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	61	576	10.0	5466	False	AATAAA	-19
PB.9706.1	chr6	+	1671	2	full-splice_match	FAM50B	ENST00000648326.1	1643	2	-27	-1	-27	1	multi-exon	FALSE	canonical	1	97320	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	325	978	165	1142	20.0	-292	False	AATAAA	-19
PB.5882.2	chr19	+	2404	4	full-splice_match	ZNF429	ENST00000358491.8	2233	4	28	-199	-12	199	multi-exon	FALSE	canonical	1	18688	junction_1	23515.18550969895	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	181	2205	100.0	-10	True	NA	NA
PB.7384.20	chr20	+	2265	1	novel_in_catalog	GNAS	novel	2578	13	NA	NA	-546	-3529	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-9102	False	NA	NA
PB.5029.1	chr17	-	1535	4	full-splice_match	TMEM101	ENST00000206380.7	1536	4	3	-2	3	-1	multi-exon	FALSE	canonical	1	329557	junction_3	21059.674140140174	NA	0	NA	TRUE	NA	NA	NA	A	coding	247	744	53	796	5.0	-12	True	AATAAA	-15
PB.5882.3	chr19	+	2310	5	novel_not_in_catalog	ZNF429	novel	831	6	NA	NA	-5	23	intron_retention	FALSE	canonical	1	2385	junction_1	30225.388809533946	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	359	2287	90.0	-3	True	NA	NA
PB.8653.5	chr4	-	3094	10	novel_not_in_catalog	CTBP1	novel	2467	10	NA	NA	-557	-6	any annotated donor/acceptor	FALSE	canonical	1	112581	junction_9	494453.6221242619	NA	1	NA	TRUE	NA	NA	NA	B	coding	421	1266	1043	2308	30.0	6949	False	AATAAA	-9
PB.8653.4	chr4	-	2124	9	novel_in_catalog	CTBP1	novel	2467	10	NA	NA	31	0	no_combination_of_known_junctions	TRUE	canonical	1	3409	junction_8	548519.0653910195	NA	8	1	TRUE	NA	NA	NA	B	coding	421	1266	67	1332	20.0	-4	True	AATAAA	-15
PB.8653.7	chr4	-	4497	10	novel_not_in_catalog	CTBP1	novel	2467	10	NA	NA	-1958	-7	any annotated donor/acceptor	FALSE	canonical	1	112581	junction_9	541872.7657479733	NA	2	NA	TRUE	NA	NA	NA	B	coding	422	1269	2444	3712	30.0	5548	False	AATAAA	-8
PB.8653.6	chr4	-	2413	10	novel_in_catalog	CTBP1	novel	2467	10	NA	NA	51	-6	combination_of_known_junctions	FALSE	canonical	1	268842	junction_9	510844.48295944114	NA	0	NA	TRUE	NA	NA	NA	B	coding	422	1269	359	1627	30.0	368	False	AATAAA	-9
PB.3953.2	chr15	+	2586	2	novel_in_catalog	RPLP1	novel	1197	4	NA	NA	1	-1	intron_retention	FALSE	canonical	1	15295088	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2	True	AATAAA	-13
PB.3953.1	chr15	+	512	4	full-splice_match	RPLP1	ENST00000260379.10	1197	4	35	650	0	-2	multi-exon	FALSE	canonical	1	9157924	junction_1	2527221.416824458	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	131	475	5.0	1	True	AATAAA	-12
PB.8653.2	chr4	-	2345	10	novel_in_catalog	CTBP1	novel	2467	10	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	1	31906	junction_9	513758.3503094297	NA	0	NA	TRUE	NA	NA	NA	B	coding	421	1266	286	1551	20.0	-28	True	AATAAA	-17
PB.9037.6	chr4	+	2748	9	novel_not_in_catalog	GUCY1A1	novel	2715	10	NA	NA	-18	0	intron_retention	FALSE	canonical	1	4358	junction_1	58872.66232182281	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	491	2563	80.0	-136	False	NA	NA
PB.9037.7	chr4	+	6690	1	novel_in_catalog	GUCY1A1	novel	2715	10	NA	NA	0	-36259	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	111	336	192	527	90.0	1	True	NA	NA
PB.9037.4	chr4	+	2419	9	incomplete-splice_match	GUCY1A1	ENST00000506455.5	2715	10	660	16	33	0	5prime_fragment	FALSE	canonical	1	63649	junction_1	43456.75310869417	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	162	2234	80.0	-410	False	NA	NA
PB.5882.1	chr19	+	2231	4	full-splice_match	ZNF429	ENST00000358491.8	2233	4	25	-23	-15	23	multi-exon	FALSE	canonical	1	18688	junction_1	23515.18550969895	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	184	2208	90.0	-13	True	NA	NA
PB.9037.2	chr4	+	2671	10	full-splice_match	GUCY1A1	ENST00000296518.11	4400	10	-204	1933	31	0	multi-exon	FALSE	canonical	1	17021	junction_1	57222.97058669212	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	414	2486	80.0	0	True	NA	NA
PB.9037.3	chr4	+	2647	10	novel_in_catalog	GUCY1A1	novel	2715	10	NA	NA	34	0	intron_retention	FALSE	canonical	1	12487	junction_1	58226.63721937361	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	390	2462	80.0	3	True	NA	NA
PB.4948.8	chr17	-	4685	17	full-splice_match	MED1	ENST00000300651.10	5844	17	24	1135	6	-22	multi-exon	FALSE	canonical	1	159274	junction_11	55263.97462855973	NA	21	NA	TRUE	NA	NA	NA	C	coding	1495	4485	201	4685	70.0	-1	True	AATACA	-9
PB.4948.9	chr17	-	4634	16	novel_in_catalog	MED1	novel	2870	18	NA	NA	1	-7	no_combination_of_known_junctions	FALSE	canonical	1	2614	junction_9	80037.74626245628	NA	2	1	TRUE	NA	NA	NA	C	coding	1475	4425	210	4634	70.0	-10	True	AATACA	-24
PB.4948.6	chr17	-	5712	16	full-splice_match	MED1	ENST00000577831.5	4584	16	10	-1138	6	25	multi-exon	FALSE	canonical	1	9722	junction_12	79465.78209837657	NA	0	NA	TRUE	NA	NA	NA	C	coding	1409	4230	584	4813	85.0	-1	True	NA	NA
PB.4948.7	chr17	-	4851	18	novel_in_catalog	MED1	novel	2870	18	NA	NA	14	-7	combination_of_known_junctions	FALSE	canonical	1	6452	junction_16	91084.1233162545	NA	4	1	TRUE	NA	NA	NA	C	coding	1451	4353	499	4851	70.0	7	True	AATACA	-24
PB.4948.4	chr17	-	1859	1	novel_in_catalog	MED1	novel	2870	18	NA	NA	25084	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-3597	False	AATAAA	-11
PB.4948.5	chr17	-	5853	17	full-splice_match	MED1	ENST00000300651.10	5844	17	16	-25	2	25	multi-exon	FALSE	canonical	1	159274	junction_11	55263.97462855973	NA	0	NA	TRUE	NA	NA	NA	C	coding	1581	4746	209	4954	85.0	-9	True	NA	NA
PB.4948.2	chr17	-	2858	18	full-splice_match	MED1	ENST00000394287.7	2870	18	3	9	3	-9	multi-exon	TRUE	canonical	1	9794	junction_1	75496.37587855359	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	204	1874	35.0	-4	True	AATAAA	-11
PB.4948.3	chr17	-	2761	18	novel_not_in_catalog	MED1	novel	2870	18	NA	NA	1	-9	any annotated donor/acceptor	FALSE	canonical	1	17126	junction_1	74291.87129872112	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	206	2056	35.0	-6	True	AATAAA	-11
PB.9037.8	chr4	+	2538	9	full-splice_match	GUCY1A1	ENST00000513574.1	2656	9	103	15	103	1	multi-exon	FALSE	canonical	1	15400	junction_1	55802.64180336246	NA	14	NA	TRUE	NA	NA	NA	C	coding	690	2073	280	2352	75.0	-15	False	NA	NA
PB.9037.9	chr4	+	4252	9	full-splice_match	GUCY1A1	ENST00000513574.1	2656	9	40	-1636	40	-277	multi-exon	FALSE	canonical	1	15400	junction_1	55802.64180336246	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	343	2415	65.0	5	True	AATACA	-40
PB.8953.6	chr4	+	1923	7	incomplete-splice_match	METTL14	ENST00000388822.9	6669	11	18	16981	-14	1097	3prime_fragment	FALSE	canonical	1	154952	junction_6	27871.958048766905	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	150	800	100.0	-7	True	NA	NA
PB.490.26	chr1	+	1965	10	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	11	415	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	204864.05519162107	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	96	1391	90.0	32	True	NA	NA
PB.9194.1	chr5	+	3435	3	full-splice_match	PTGER4	ENST00000302472.3	3848	3	417	-4	-15	4	multi-exon	FALSE	canonical	1	116067	junction_2	16977.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	488	1467	608	2074	20.0	0	True	AATAAA	-18
PB.1267.13	chr10	-	1694	5	full-splice_match	IDI1	ENST00000381344.7	2301	5	278	329	-9	-329	multi-exon	FALSE	canonical	1	305653	junction_4	373868.5750690843	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	58	744	70.0	-7	True	NA	NA
PB.1267.12	chr10	-	1537	4	full-splice_match	IDI1	ENST00000491735.1	1066	4	196	-667	-24	-328	multi-exon	FALSE	canonical	1	147591	junction_3	449155.6753200634	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-22	True	NA	NA
PB.1267.11	chr10	-	2240	6	novel_not_in_catalog	IDI1	novel	3370	5	NA	NA	-2	-119	any annotated donor/acceptor	FALSE	canonical	1	411	junction_5	513631.75109504274	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	397	1080	40.0	0	True	AATAAA	-20
PB.1267.10	chr10	-	2498	5	full-splice_match	IDI1	ENST00000429642.2	3370	5	-3	875	-3	-119	multi-exon	FALSE	canonical	1	8222	junction_4	477572.05441064073	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	655	1338	40.0	-1	True	AATAAA	-20
PB.1267.16	chr10	-	2789	2	novel_not_in_catalog	IDI1	novel	3370	5	NA	NA	-3	-2681	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	AATATA	-43
PB.1267.15	chr10	-	2799	2	novel_not_in_catalog	IDI1	novel	3370	5	NA	NA	-2	-2715	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	6	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	AATATA	-9
PB.1267.14	chr10	-	6323	2	novel_not_in_catalog	IDI1	novel	3370	5	NA	NA	-3	725	intron_retention	TRUE	canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.5812.5	chr19	+	7577	40	novel_in_catalog	MYO9B	novel	7623	40	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	75342	junction_39	137980.3515314944	NA	19	2	TRUE	NA	NA	NA	C	coding	2156	6471	133	6603	20.0	24	True	AATAAA	-12
PB.10994.9	chr8	+	1652	11	novel_not_in_catalog	VPS37A	novel	4906	12	NA	NA	10	-5	any annotated donor/acceptor	FALSE	canonical	1	18409	junction_8	76197.67583260003	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	298	1473	30.0	-10	True	TATAAA	-13
PB.8953.5	chr4	+	2724	11	full-splice_match	METTL14	ENST00000388822.9	6669	11	23	3922	-9	910	multi-exon	FALSE	canonical	1	154952	junction_6	26431.47776875141	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	145	1515	25.0	-2	True	AAAAAG	-9
PB.5812.4	chr19	+	2001	12	incomplete-splice_match	MYO9B	ENST00000594824.5	7595	40	12	40876	12	-11594	3prime_fragment	FALSE	canonical	1	90299	junction_1	108534.73507294967	NA	1	1	TRUE	NA	NA	NA	C	coding	622	1866	136	2001	15.0	21	True	NA	NA
PB.10994.3	chr8	+	4545	12	full-splice_match	VPS37A	ENST00000324849.8	4906	12	360	1	0	-1	multi-exon	FALSE	canonical	1	88813	junction_3	96305.40970087243	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	315	1508	25.0	-27	True	AATAAA	-21
PB.8953.2	chr4	+	3502	11	full-splice_match	METTL14	ENST00000388822.9	6669	11	3	3164	3	1668	multi-exon	FALSE	canonical	1	154952	junction_6	26431.47776875141	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	165	1535	15.0	-72	False	AATGAA	-15
PB.10994.1	chr8	+	1818	12	full-splice_match	VPS37A	ENST00000324849.8	4906	12	341	2747	-19	0	multi-exon	FALSE	canonical	1	88813	junction_3	96305.40970087243	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	334	1527	25.0	-9408	False	ATTAAA	-15
PB.10994.7	chr8	+	3231	12	full-splice_match	VPS37A	ENST00000324849.8	4906	12	380	1295	13	-858	multi-exon	FALSE	canonical	1	88813	junction_3	96305.40970087243	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	295	1488	80.0	-7	True	GATAAA	-36
PB.10994.6	chr8	+	3294	13	novel_in_catalog	VPS37A	novel	4906	12	NA	NA	1	-856	combination_of_known_junctions	FALSE	canonical	1	8581	junction_1	112959.63449942222	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	677	1549	85.0	-23	True	GATAAA	-38
PB.10994.5	chr8	+	2049	12	novel_not_in_catalog	VPS37A	novel	4906	12	NA	NA	0	268	any annotated donor/acceptor	FALSE	canonical	1	18409	junction_8	103134.6939195744	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	315	1490	50.0	-27	True	AATAAA	-3
PB.8953.3	chr4	+	2406	10	novel_in_catalog	METTL14	novel	6669	11	NA	NA	-15	797	combination_of_known_junctions	FALSE	canonical	1	26695	junction_9	59791.39955433947	NA	3	1	TRUE	NA	NA	NA	C	coding	314	945	151	1095	25.0	-8	True	AATGAA	-37
PB.506.9	chr1	-	2443	14	novel_not_in_catalog	MCOLN3	novel	2756	13	NA	NA	-31	17	any annotated donor/acceptor	FALSE	canonical	1	86	junction_12	14595.831467403701	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	550	2211	15.0	-62	False	TTTAAA	-33
PB.506.8	chr1	-	2485	14	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	-43	-401	combination_of_known_junctions	FALSE	canonical	1	6909	junction_12	13539.63324781019	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	185	1846	35.0	-74	False	NA	NA
PB.506.5	chr1	-	3307	15	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	1	1892	junction_13	16543.86614798515	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	1072	2268	35.0	-72	False	ATTAAA	-15
PB.506.4	chr1	-	2705	12	full-splice_match	MCOLN3	ENST00000341115.8	1762	12	-118	-825	-65	0	multi-exon	FALSE	canonical	1	2003	junction_10	14982.348623111893	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	172	1665	35.0	-96	False	ATTAAA	-16
PB.506.7	chr1	-	2408	13	full-splice_match	MCOLN3	ENST00000370589.6	2756	13	-53	401	0	-400	multi-exon	FALSE	canonical	1	10979	junction_12	11246.807227189214	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	107	1768	35.0	-31	True	NA	NA
PB.8953.1	chr4	+	2616	11	full-splice_match	METTL14	ENST00000388822.9	6669	11	18	4035	-14	797	multi-exon	FALSE	canonical	1	154952	junction_6	26431.47776875141	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	150	1520	25.0	-7	True	AATGAA	-37
PB.506.1	chr1	-	2820	13	full-splice_match	MCOLN3	ENST00000370589.6	2756	13	-55	-9	-2	9	multi-exon	FALSE	canonical	1	10979	junction_12	11246.807227189214	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	109	1770	40.0	-33	True	ATTAAA	-26
PB.6656.1	chr2	-	4245	1	incomplete-splice_match	LONRF2	ENST00000393437.7	13912	12	45040	158	31812	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	102	309	712	1020	45.0	3953	False	AATAAA	-16
PB.506.3	chr1	-	2898	14	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	6909	junction_12	13539.63324781019	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	197	1858	35.0	-86	False	ATTAAA	-16
PB.4544.1	chr16	+	2489	1	antisense	novelGene_LINC01572_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	12	39	295	333	50.0	NA	False	NA	NA
PB.9485.1	chr5	-	2420	1	novel_in_catalog	MZB1	novel	1096	4	NA	NA	0	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	117	354	59	412	75.0	-2	True	GGGGCT	-41
PB.11601.4	chr9	-	2882	3	novel_in_catalog	ABHD17B	novel	1312	5	NA	NA	-260	-1	no_combination_of_known_junctions	FALSE	canonical	1	6325	junction_1	70930.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	562	1248	10.0	1	True	AGTAAA	-19
PB.9774.8	chr6	+	4173	7	novel_in_catalog	E2F3	novel	4094	5	NA	NA	-132	-402	combination_of_known_junctions	FALSE	canonical	1	43990	junction_1	47137.896112245915	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	269	1291	70.0	-289	False	AATAAA	-31
PB.9774.9	chr6	+	4380	7	full-splice_match	E2F3	ENST00000535432.2	4425	7	44	1	44	-1	multi-exon	FALSE	canonical	1	9370	junction_2	58424.15663252849	NA	3	NA	TRUE	NA	NA	NA	C	coding	334	1005	93	1097	10.0	0	True	AATAAA	-44
PB.11601.1	chr9	-	3323	5	novel_not_in_catalog	ABHD17B	novel	1312	5	NA	NA	-254	-1	any annotated donor/acceptor	FALSE	canonical	1	3515	junction_4	130298.53222887816	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	823	1689	10.0	7	True	AGTAAA	-19
PB.9485.4	chr5	-	2041	2	full-splice_match	MZB1	ENST00000511979.1	839	2	-1176	-26	-24	0	multi-exon	FALSE	canonical	1	1155812	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	83	436	25.0	5207	False	AATAAA	-14
PB.11601.3	chr9	-	3063	4	full-splice_match	ABHD17B	ENST00000333421.6	2614	4	-451	2	-262	-2	multi-exon	FALSE	canonical	1	148186	junction_3	57098.74565074866	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	564	1430	10.0	-1	True	AGTAAA	-18
PB.11601.2	chr9	-	3169	5	novel_not_in_catalog	ABHD17B	novel	1312	5	NA	NA	-272	-1	any annotated donor/acceptor	FALSE	canonical	1	1776	junction_4	133341.57237593795	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	669	1535	10.0	-11	True	AGTAAA	-19
PB.9774.2	chr6	+	4481	7	novel_in_catalog	E2F3	novel	4094	5	NA	NA	249	0	combination_of_known_junctions	FALSE	canonical	1	9370	junction_2	63532.421360409884	NA	6	NA	TRUE	NA	NA	NA	C	coding	224	675	523	1197	10.0	-1420	False	AATAAA	-45
PB.9774.3	chr6	+	4467	7	full-splice_match	E2F3	ENST00000346618.7	4749	7	281	1	281	0	multi-exon	FALSE	canonical	1	11789	junction_1	54557.58689601902	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	509	1183	10.0	-1388	False	AATAAA	-45
PB.9774.1	chr6	+	4753	7	novel_not_in_catalog	E2F3	novel	4094	5	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	65851.92153528162	NA	2	1	TRUE	NA	NA	NA	C	coding	224	675	796	1470	10.0	13	True	AATAAA	-44
PB.9774.6	chr6	+	2838	7	novel_in_catalog	E2F3	novel	4094	5	NA	NA	40	-1565	combination_of_known_junctions	FALSE	canonical	1	43990	junction_1	47137.896112245915	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	97	1119	85.0	-4	True	NA	NA
PB.9774.7	chr6	+	4253	7	novel_in_catalog	E2F3	novel	4094	5	NA	NA	34	-156	combination_of_known_junctions	FALSE	canonical	1	43990	junction_1	47137.896112245915	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	103	1125	85.0	-10	True	NA	NA
PB.9774.4	chr6	+	4239	7	full-splice_match	E2F3	ENST00000346618.7	4749	7	327	183	327	-182	multi-exon	FALSE	canonical	1	11789	junction_1	54557.58689601902	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	463	1137	70.0	-1342	False	NA	NA
PB.9774.5	chr6	+	4409	7	novel_in_catalog	E2F3	novel	4094	5	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	1	43990	junction_1	47137.896112245915	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	103	1125	10.0	-10	True	AATAAA	-45
PB.10528.10	chr7	-	3372	5	full-splice_match	H2AFV	ENST00000222690.10	3804	5	13	419	-1	-419	multi-exon	FALSE	canonical	1	79965	junction_1	457696.38983610086	NA	4	NA	TRUE	NA	NA	NA	C	coding	114	345	94	438	25.0	15	True	AATAAA	-23
PB.5903.2	chr19	+	4575	3	novel_in_catalog	PDCD5	novel	699	6	NA	NA	-30	2	intron_retention	FALSE	canonical	1	927011	junction_2	507932.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	2791	3198	55.0	-303	False	AATAAA	-11
PB.10528.12	chr7	-	2237	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	-13	-2081	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	521595.44823650445	NA	1	1	TRUE	NA	NA	NA	C	coding	128	387	126	512	0.0	-17	True	NA	NA
PB.10528.13	chr7	-	2114	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	-4	-2081	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	521595.44823650445	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	117	503	0.0	-8	True	NA	NA
PB.10528.14	chr7	-	1917	5	full-splice_match	H2AFV	ENST00000308153.8	752	5	-17	-1148	0	1148	multi-exon	FALSE	canonical	1	90913	junction_3	487220.3639886037	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	110	496	35.0	-1	True	NA	NA
PB.10528.15	chr7	-	1679	5	full-splice_match	H2AFV	ENST00000308153.8	752	5	75	-1002	33	1002	multi-exon	FALSE	canonical	1	90913	junction_3	487220.3639886037	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	18	404	60.0	91	False	NA	NA
PB.10528.16	chr7	-	765	5	full-splice_match	H2AFV	ENST00000308153.8	752	5	-21	8	-1	3	multi-exon	FALSE	canonical	1	90913	junction_3	487220.3639886037	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	114	500	50.0	-5	True	GATAAA	-12
PB.5444.4	chr18	+	3821	7	full-splice_match	MAPRE2	ENST00000300249.9	4265	7	45	399	1	-395	multi-exon	FALSE	canonical	1	409720	junction_2	122437.73112269037	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	136	1119	95.0	-16	True	NA	NA
PB.5444.5	chr18	+	2589	7	full-splice_match	MAPRE2	ENST00000300249.9	4265	7	63	1613	-8	1360	multi-exon	FALSE	canonical	1	409720	junction_2	122437.73112269037	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	118	1101	30.0	2	True	AATAAA	-20
PB.5444.1	chr18	+	2465	8	full-splice_match	MAPRE2	ENST00000413393.5	4173	8	100	1608	-23	1361	multi-exon	FALSE	canonical	1	43656	junction_1	268069.86464375746	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	122	976	30.0	-17	True	AATAAA	-21
PB.5444.2	chr18	+	2375	7	full-splice_match	MAPRE2	ENST00000300249.9	4265	7	33	1857	-11	1116	multi-exon	FALSE	canonical	1	409720	junction_2	122437.73112269037	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	148	1131	30.0	-28	True	ATTAAA	-22
PB.5444.3	chr18	+	4222	7	full-splice_match	MAPRE2	ENST00000300249.9	4265	7	45	-2	1	2	multi-exon	FALSE	canonical	1	409720	junction_2	122437.73112269037	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	136	1119	20.0	-16	True	AATAAA	-23
PB.702.9	chr1	-	3877	26	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-24	-937	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	13571.467019655616	NA	0	NA	TRUE	NA	NA	NA	B	coding	843	2529	1348	3876	65.0	NA	False	AAGAAA	-26
PB.9453.4	chr5	-	3824	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	59	766	-10	-766	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	223	1152	35.0	-13	True	ATTAAA	-21
PB.9272.1	chr5	-	2201	1	novel_in_catalog	AC145146.1	novel	297	2	NA	NA	-7109	-13041	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	ATTAAA	-20
PB.8770.1	chr4	-	10964	63	novel_in_catalog	FRYL	novel	11103	61	NA	NA	-11	448	combination_of_known_junctions	TRUE	canonical	1	55971	junction_50	45992.50891131724	NA	0	NA	TRUE	NA	NA	NA	B	coding	3007	9024	617	9640	85.0	-40	True	NA	NA
PB.4787.12	chr17	-	3191	5	full-splice_match	NCOR1	ENST00000585296.1	983	5	6	-2214	-5	2214	multi-exon	FALSE	canonical	1	125290	junction_4	97483.31335509426	NA	3	NA	TRUE	NA	NA	NA	C	coding	211	636	252	887	25.0	-9	True	NA	NA
PB.4787.11	chr17	-	1152	9	incomplete-splice_match	NCOR1	ENST00000411510.5	1883	15	-10	23382	1	15407	3prime_fragment	FALSE	canonical	1	125290	junction_8	78725.60952437508	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	894	257	1150	50.0	-14	True	AAGAAA	-7
PB.4787.10	chr17	-	1717	14	incomplete-splice_match	NCOR1	ENST00000411510.5	1883	15	-28	11295	-5	-11245	3prime_fragment	FALSE	canonical	1	125290	junction_13	116987.79955753338	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1443	275	1717	65.0	-32	False	NA	NA
PB.9200.6	chr5	+	5331	7	novel_in_catalog	C5orf51	novel	563	5	NA	NA	-5	-1	intron_retention	TRUE	canonical	1	6377	junction_3	85047.00107146637	NA	3	NA	TRUE	NA	NA	NA	C	coding	267	804	192	995	15.0	0	True	AATAAA	-14
PB.1985.1	chr11	+	3283	18	novel_not_in_catalog	INCENP	novel	3964	19	NA	NA	-1	-428	any annotated donor/acceptor	TRUE	canonical	1	93698	junction_13	85679.61714142827	NA	3	2	TRUE	NA	NA	NA	C	coding	918	2757	179	2935	25.0	-14	True	AATAAA	-13
PB.1985.2	chr11	+	3281	18	novel_not_in_catalog	INCENP	novel	3964	19	NA	NA	0	-428	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	93803.94224062415	NA	3	1	TRUE	NA	NA	NA	C	coding	328	987	1947	2933	25.0	-13	True	AATAAA	-13
PB.1985.3	chr11	+	5680	18	novel_not_in_catalog	INCENP	novel	3964	19	NA	NA	3	1576	intron_retention	FALSE	canonical	0	0	junction_10	93803.94224062415	NA	16	1	TRUE	NA	NA	NA	C	coding	328	987	1931	2917	20.0	3	True	NA	NA
PB.1985.4	chr11	+	5319	18	novel_not_in_catalog	INCENP	novel	3964	19	NA	NA	0	1199	intron_retention	FALSE	canonical	0	0	junction_10	93803.94224062415	NA	4	1	TRUE	NA	NA	NA	C	coding	328	987	1947	2933	30.0	-13	True	NA	NA
PB.1985.5	chr11	+	5061	10	incomplete-splice_match	INCENP	ENST00000278849.4	3698	18	0	8417	0	2590	3prime_fragment	FALSE	canonical	1	178908	junction_1	64871.06253347653	NA	2	NA	TRUE	NA	NA	NA	C	coding	559	1680	178	1857	95.0	-13	True	NA	NA
PB.1985.6	chr11	+	4678	18	novel_not_in_catalog	INCENP	novel	3964	19	NA	NA	2	556	intron_retention	FALSE	non_canonical	0	0	junction_10	115206.98713134699	NA	3	1	TRUE	NA	NA	NA	C	coding	569	1710	176	1885	50.0	-11	True	NA	NA
PB.1985.7	chr11	+	3267	18	full-splice_match	INCENP	ENST00000278849.4	3698	18	3	428	3	-428	multi-exon	FALSE	canonical	1	129228	junction_10	72941.2456432784	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	175	2919	25.0	-10	True	AATAAA	-13
PB.1985.8	chr11	+	4573	11	incomplete-splice_match	INCENP	ENST00000394818.7	3964	19	58	8646	20	2590	3prime_fragment	FALSE	canonical	1	84074	junction_10	92689.66872877472	NA	3	NA	TRUE	NA	NA	NA	C	coding	543	1632	145	1776	95.0	20	True	NA	NA
PB.1985.9	chr11	+	4620	18	full-splice_match	INCENP	ENST00000278849.4	3698	18	45	-967	32	556	multi-exon	FALSE	canonical	1	129228	junction_10	72941.2456432784	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	133	2877	50.0	32	True	NA	NA
PB.5678.8	chr19	+	2378	16	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	919055.9989487184	NA	1	1	TRUE	NA	NA	NA	B	coding	579	1740	383	2122	20.0	0	True	AATAAA	-13
PB.6831.1	chr2	-	2392	11	novel_in_catalog	METTL8	novel	8132	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	18027	junction_10	44274.86011733973	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	248	1471	100.0	-4	True	NA	NA
PB.10128.1	chr6	+	1510	1	full-splice_match	AL133338.1	ENST00000565695.2	1517	1	11	-4	11	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	3	True	NA	NA
PB.6897.1	chr2	-	3333	8	full-splice_match	SLC40A1	ENST00000261024.6	3442	8	96	13	-8	-13	multi-exon	FALSE	canonical	1	298056	junction_6	64991.469736655534	NA	0	NA	TRUE	NA	NA	NA	A	coding	571	1716	332	2047	20.0	-9	True	TATAAA	-18
PB.5903.8	chr19	+	4687	2	incomplete-splice_match	PDCD5	ENST00000419343.7	1799	4	16	617	-15	-617	intron_retention	FALSE	canonical	1	1942875	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	27	True	NA	NA
PB.11700.24	chr9	+	4610	17	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	28	-4620	intron_retention	FALSE	canonical	1	4241	junction_5	194613.43407729943	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	919	2268	35.0	-1	True	AATAAA	-12
PB.9315.1	chr5	+	3469	14	novel_in_catalog	TENT2	novel	781	5	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	34677	junction_10	119811.13452652279	NA	4	1	TRUE	NA	NA	NA	C	coding	345	1038	685	1722	5.0	-12	True	AATAAA	-20
PB.11700.26	chr9	+	3530	15	incomplete-splice_match	SLC44A1	ENST00000374723.5	9640	16	33	10478	33	-9150	3prime_fragment	FALSE	canonical	1	136759	junction_1	124142.07722630238	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	215	2374	100.0	4	True	NA	NA
PB.5903.9	chr19	+	5495	2	incomplete-splice_match	PDCD5	ENST00000586035.1	601	6	-98	-2	-98	2	intron_retention	FALSE	canonical	1	86641	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-21	True	AATAAA	-11
PB.11700.20	chr9	+	3565	16	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	5	-5588	intron_retention	FALSE	canonical	1	2220	junction_2	165120.4378238166	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	332	2191	100.0	-24	True	AATACA	-11
PB.10922.1	chr7	+	1926	3	novel_in_catalog	AC073111.4	novel	582	3	NA	NA	22961	356	no_combination_of_known_junctions	FALSE	canonical	1	9432	junction_1	24263.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	203	612	256	867	20.0	2	True	AATAAA	-9
PB.10922.2	chr7	+	1754	3	novel_not_in_catalog	AC073111.4	novel	582	3	NA	NA	24955	356	any annotated donor/acceptor	FALSE	canonical	1	25532	junction_2	1748.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	55	168	385	552	20.0	1996	False	AATAAA	-9
PB.11700.23	chr9	+	4557	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	26	5928	26	-4600	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	3	NA	TRUE	NA	NA	NA	C	coding	657	1974	222	2195	35.0	-3	True	AATAAA	-32
PB.9491.2	chr5	+	2353	4	novel_not_in_catalog	CXXC5	novel	503	2	NA	NA	106	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	234956.4362023073	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	412	1380	15.0	-1010	False	AATAAA	-23
PB.9491.3	chr5	+	1401	3	full-splice_match	CXXC5	ENST00000511048.1	1892	3	-7	498	1	-16	multi-exon	FALSE	canonical	1	73582	junction_1	249866.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	245	1213	85.0	-482	False	NA	NA
PB.9491.1	chr5	+	1813	3	full-splice_match	CXXC5	ENST00000302517.7	2658	3	58	787	58	-16	multi-exon	FALSE	canonical	1	243026	junction_1	165144.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	657	1625	85.0	-8	True	NA	NA
PB.11700.28	chr9	+	3370	16	novel_not_in_catalog	SLC44A1	novel	9640	16	NA	NA	-1589	-5587	intron_retention	FALSE	canonical	0	0	junction_1	150710.84241175954	NA	8	1	TRUE	NA	NA	NA	C	coding	616	1851	145	1995	100.0	-6636	False	AATACA	-12
PB.11700.29	chr9	+	3449	16	novel_in_catalog	SLC44A1	novel	9640	16	NA	NA	-4	-5588	intron_retention	TRUE	canonical	1	839	junction_1	150541.1275720581	NA	1	1	TRUE	NA	NA	NA	C	coding	616	1851	225	2075	100.0	2	True	AATACA	-11
PB.9491.4	chr5	+	2811	2	incomplete-splice_match	CXXC5	ENST00000511048.1	1892	3	-2	498	2	-16	intron_retention	FALSE	canonical	1	73582	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	240	1178	85.0	-477	False	NA	NA
PB.9491.5	chr5	+	2172	3	full-splice_match	CXXC5	ENST00000511048.1	1892	3	7	-287	7	-2	multi-exon	FALSE	canonical	1	73582	junction_1	249866.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	231	1199	15.0	-14	True	AATAAA	-23
PB.7057.15	chr2	+	2332	25	full-splice_match	SP100	ENST00000264052.9	3882	25	259	1291	-20	-1291	multi-exon	FALSE	canonical	1	46376	junction_24	271806.27385279955	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2235	97	2331	60.0	-19	True	NA	NA
PB.1991.4	chr11	-	1629	9	novel_not_in_catalog	AP002990.1	novel	1954	13	NA	NA	-33	-1168	any annotated donor/acceptor	FALSE	canonical	1	30031	junction_1	72988.63605512504	NA	0	NA	TRUE	NA	NA	NA	B	coding	516	1548	80	1627	20.0	8	True	AATAAA	-15
PB.1991.3	chr11	-	2646	9	novel_in_catalog	AP002990.1	novel	1954	13	NA	NA	-51	-1168	no_combination_of_known_junctions	FALSE	canonical	1	9177	junction_8	79546.6180581197	NA	0	NA	TRUE	NA	NA	NA	B	coding	788	2367	240	2606	20.0	-10	True	AATAAA	-15
PB.1991.2	chr11	-	2727	9	full-splice_match	TUT1	ENST00000308436.11	2826	9	91	8	-23	-5	multi-exon	FALSE	canonical	1	144014	junction_5	40768.311416274955	NA	0	NA	TRUE	NA	NA	NA	A	coding	874	2625	62	2686	15.0	0	True	AATAAA	-16
PB.1991.1	chr11	-	3143	8	incomplete-splice_match	AP002990.1	ENST00000496634.2	5064	17	-13	15444	-13	-1161	3prime_fragment	FALSE	canonical	1	144014	junction_4	39222.040497346774	NA	0	NA	TRUE	NA	NA	NA	B	coding	509	1530	60	1589	5.0	2	True	AATAAA	-22
PB.8274.1	chr3	-	2067	4	novel_in_catalog	RPL24	novel	668	5	NA	NA	-21	0	intron_retention	FALSE	canonical	1	1183287	junction_3	1068115.070549049	NA	3	NA	TRUE	NA	NA	NA	C	coding	110	333	60	392	10.0	-18	False	AATAAA	-18
PB.4930.7	chr17	-	2718	7	incomplete-splice_match	HNF1B	ENST00000614313.4	1819	8	-45	12736	-4	-12736	3prime_fragment	FALSE	canonical	1	45204	junction_5	15096.181210454812	NA	4	NA	TRUE	NA	NA	NA	C	coding	551	1656	180	1835	60.0	-5	True	NA	NA
PB.4930.6	chr17	-	2320	9	full-splice_match	HNF1B	ENST00000621123.4	1971	9	-32	-317	14	317	multi-exon	FALSE	canonical	1	19107	junction_7	21336.89316616585	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	208	1803	10.0	-3	True	AGTAAA	-43
PB.4930.5	chr17	-	2665	8	full-splice_match	HNF1B	ENST00000614313.4	1819	8	-36	-810	5	0	multi-exon	FALSE	canonical	1	3702	junction_1	26991.38399941881	NA	2	NA	TRUE	NA	NA	NA	C	coding	548	1647	171	1817	25.0	4	True	ATTAAA	-19
PB.4930.4	chr17	-	4601	8	novel_in_catalog	HNF1B	novel	2977	9	NA	NA	22	0	intron_retention	FALSE	canonical	1	45204	junction_6	15183.623403966174	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	200	1855	25.0	5	True	ATTAAA	-19
PB.4930.3	chr17	-	2696	10	novel_not_in_catalog	HNF1B	novel	2977	9	NA	NA	-3	1	intron_retention	FALSE	non_canonical	0	0	junction_9	26443.108708562228	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	82	1755	20.0	67	False	ATTAAA	-20
PB.4930.2	chr17	-	2717	9	full-splice_match	HNF1B	ENST00000621123.4	1971	9	-5	-741	-5	1	multi-exon	FALSE	canonical	1	19107	junction_7	21336.89316616585	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	181	1776	20.0	-6	True	ATTAAA	-20
PB.4930.1	chr17	-	3017	9	full-splice_match	HNF1B	ENST00000617811.4	2977	9	-41	1	-41	-1	multi-exon	FALSE	canonical	1	45204	junction_7	14238.53213115734	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	405	2078	25.0	-200	False	ATTAAA	-18
PB.10802.10	chr7	+	1882	15	full-splice_match	ST7	ENST00000422922.5	1887	15	3	2	3	2	multi-exon	FALSE	canonical	1	23170	junction_1	87015.28768708005	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	112	1638	20.0	3	True	AATAAA	-19
PB.8476.7	chr3	+	3241	1	full-splice_match	RAP2B	ENST00000323534.4	8351	1	1657	3453	1657	-3453	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-262	False	AGTAAA	-13
PB.1903.18	chr11	+	5348	12	novel_in_catalog	API5	novel	560	4	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	614	junction_10	130640.61842726346	NA	2	NA	TRUE	NA	NA	NA	C	coding	307	924	135	1058	5.0	-2	True	AATAAA	-17
PB.1903.19	chr11	+	3544	6	incomplete-splice_match	API5	ENST00000534600.5	1760	13	-100	9932	-2	7314	3prime_fragment	FALSE	canonical	1	169275	junction_2	88728.27298127695	NA	3	NA	TRUE	NA	NA	NA	C	coding	260	783	133	915	25.0	0	True	NA	NA
PB.10541.1	chr7	+	2507	1	incomplete-splice_match	IKZF1	ENST00000644005.1	6302	8	95380	2546	32384	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	173	522	58	579	75.0	NA	False	AATGAA	-34
PB.1903.10	chr11	+	2869	5	novel_in_catalog	API5	novel	560	4	NA	NA	-4	6120	intron_retention	FALSE	canonical	1	169275	junction_2	94634.813626844	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	144	605	80.0	-11	True	NA	NA
PB.1903.11	chr11	+	3846	14	full-splice_match	API5	ENST00000531273.5	1868	14	-3	-1975	-3	110	multi-exon	FALSE	canonical	1	614	junction_12	116407.21306678694	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	143	1717	20.0	-10	True	NA	NA
PB.1903.12	chr11	+	3792	15	novel_in_catalog	API5	novel	560	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	614	junction_13	127735.95672125723	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	237	1718	5.0	-9	True	AATAAA	-18
PB.1903.13	chr11	+	3672	13	novel_in_catalog	API5	novel	560	4	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	614	junction_11	137188.95651395884	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	142	1599	5.0	-9	True	AATAAA	-17
PB.1903.14	chr11	+	2359	6	incomplete-splice_match	API5	ENST00000534600.5	1760	13	-109	11126	-2	6120	3prime_fragment	FALSE	canonical	1	169275	junction_2	88728.27298127695	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	142	924	80.0	-9	True	NA	NA
PB.1903.15	chr11	+	3451	14	full-splice_match	API5	ENST00000378852.7	3714	14	-13	276	1	-276	multi-exon	FALSE	canonical	1	614	junction_12	123468.19371283465	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	139	1653	20.0	-6	True	AATAAA	-27
PB.1903.16	chr11	+	2626	14	full-splice_match	API5	ENST00000378852.7	3714	14	-13	1101	1	447	multi-exon	FALSE	canonical	1	614	junction_12	123468.19371283465	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	139	1653	45.0	-6	True	AATAAA	-13
PB.1903.17	chr11	+	3678	14	novel_not_in_catalog	API5	novel	560	4	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	614	junction_12	137407.2619998085	NA	2	NA	TRUE	NA	NA	NA	C	coding	489	1470	136	1605	5.0	-3	True	AATAAA	-17
PB.9092.1	chr4	+	2151	14	full-splice_match	PRIMPOL	ENST00000314970.10	2289	14	134	4	9	-4	multi-exon	FALSE	canonical	1	68681	junction_7	33672.6681772846	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	300	1982	40.0	9	True	ATTAAA	-15
PB.10367.9	chr7	-	1764	3	full-splice_match	MRM2	ENST00000467199.5	1819	3	-7	62	-7	0	multi-exon	FALSE	canonical	1	26239	junction_2	128041.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	657	935	20.0	28	True	CATAAA	-16
PB.9092.3	chr4	+	2419	15	novel_not_in_catalog	PRIMPOL	novel	2289	14	NA	NA	-13	-2	any annotated donor/acceptor	FALSE	canonical	1	194	junction_8	47680.78464082031	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	335	1372	35.0	-87	False	ATTAAA	-17
PB.9092.2	chr4	+	2100	13	novel_in_catalog	PRIMPOL	novel	2289	14	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	1	4024	junction_8	43273.94402877505	NA	2	1	TRUE	NA	NA	NA	C	coding	339	1020	338	1357	40.0	-90	False	ATTAAA	-15
PB.9092.5	chr4	+	2020	13	novel_in_catalog	PRIMPOL	novel	2289	14	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	1	8408	junction_4	43148.940913679704	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	856	1842	35.0	19	True	ATTAAA	-24
PB.9092.4	chr4	+	1909	13	full-splice_match	PRIMPOL	ENST00000515774.5	2007	13	83	15	-6	-4	multi-exon	FALSE	canonical	1	7600	junction_2	43315.592042829485	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	445	1740	40.0	12	True	ATTAAA	-15
PB.303.4	chr1	-	3497	16	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	-3	536	intron_retention	FALSE	canonical	1	226807	junction_2	188474.9609249521	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	114	1442	75.0	-1	True	NA	NA
PB.303.5	chr1	-	2211	17	full-splice_match	SF3A3	ENST00000373019.4	3673	17	910	552	-16	536	multi-exon	FALSE	canonical	1	226807	junction_2	182529.00217824974	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	47	1552	75.0	10	True	NA	NA
PB.8397.23	chr3	+	3920	28	full-splice_match	ATP2C1	ENST00000510168.5	5067	28	230	917	16	848	multi-exon	FALSE	canonical	1	56424	junction_1	239457.59833480822	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	321	3080	45.0	-7	True	AATAAA	-30
PB.303.8	chr1	-	1761	16	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	33	111	no_combination_of_known_junctions	FALSE	canonical	1	15122	junction_1	208859.81642836155	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	78	1451	30.0	-21	True	AATAAA	-23
PB.303.9	chr1	-	3029	16	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	33	104	intron_retention	FALSE	canonical	1	226807	junction_2	188474.9609249521	NA	3	NA	TRUE	NA	NA	NA	C	coding	442	1329	78	1406	30.0	-21	True	AATAAA	-16
PB.661.4	chr1	+	3363	10	full-splice_match	SRGAP2C	ENST00000367123.7	7204	10	199	3642	198	1214	multi-exon	FALSE	canonical	0	0	junction_1	118681.22751937718	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	659	2038	65.0	NA	False	ATTAAA	-9
PB.10914.2	chr7	-	3660	7	full-splice_match	ZNF746	ENST00000340622.7	3806	7	144	2	60	0	multi-exon	FALSE	canonical	1	59981	junction_1	65677.44368354752	NA	7	1	TRUE	NA	NA	NA	C	coding	631	1896	177	2072	15.0	1	True	AATAAA	-15
PB.10914.1	chr7	-	3740	7	novel_in_catalog	ZNF746	novel	3949	7	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	1	66680	junction_1	61453.67880973441	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	209	2152	15.0	-31	True	AATAAA	-15
PB.5953.1	chr19	-	2679	6	full-splice_match	ZNF461	ENST00000588268.5	2584	6	-16	-79	0	79	multi-exon	FALSE	canonical	1	39157	junction_3	2473.334025157136	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	245	1936	60.0	-17	True	AATAAA	-21
PB.5953.2	chr19	-	2148	6	full-splice_match	ZNF461	ENST00000588268.5	2584	6	0	436	0	108	multi-exon	FALSE	canonical	1	39157	junction_3	2473.334025157136	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	229	1920	40.0	-1	True	AATAAA	-26
PB.1715.1	chr10	+	2763	1	intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	114	345	2	346	85.0	NA	False	NA	NA
PB.8274.3	chr3	-	1752	5	full-splice_match	RPL24	ENST00000469605.1	799	5	-10	-943	0	-3	multi-exon	FALSE	canonical	1	1183287	junction_4	925679.1247104406	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	30	482	20.0	12	True	AATAAA	-11
PB.800.2	chr1	-	2041	13	full-splice_match	CLK2	ENST00000368361.8	2166	13	118	7	-69	-1	multi-exon	FALSE	canonical	1	35321	junction_5	83454.64981499268	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	199	1698	15.0	130	False	AATAAA	-18
PB.800.3	chr1	-	2011	12	full-splice_match	CLK2	ENST00000476983.5	1885	12	-122	-4	31	-2	multi-exon	FALSE	canonical	1	35321	junction_5	90381.68539775546	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	848	1663	15.0	52	True	AATAAA	-23
PB.8303.9	chr3	-	2839	18	incomplete-splice_match	AC112128.1	ENST00000649772.1	6837	39	-34	83241	-34	-83241	3prime_fragment	FALSE	canonical	1	42466	junction_17	28836.087157117418	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	107	2674	50.0	-30	True	AATAAA	-24
PB.800.1	chr1	-	3213	11	novel_in_catalog	CLK2	novel	1934	13	NA	NA	-7	0	intron_retention	FALSE	canonical	1	35321	junction_5	88323.87001598152	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	2048	2863	10.0	5	False	AATAAA	-25
PB.8397.22	chr3	+	4702	27	full-splice_match	ATP2C1	ENST00000504948.5	4714	27	-14	26	-14	17	multi-exon	FALSE	canonical	1	53219	junction_1	228071.19362707945	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	217	2928	55.0	-41	True	AATAAA	-33
PB.7271.13	chr20	+	1953	7	novel_not_in_catalog	DLGAP4	novel	5056	13	NA	NA	72	29	intron_retention	FALSE	canonical	1	15996	junction_2	257043.23794089368	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	751	1896	30.0	24	True	ATTAAA	-19
PB.8303.3	chr3	-	3523	18	full-splice_match	SPICE1	ENST00000295872.8	5417	18	-27	1921	4	615	multi-exon	FALSE	canonical	1	24029	junction_17	31972.75607315539	NA	1	NA	TRUE	NA	NA	NA	C	coding	855	2568	288	2855	40.0	-28	True	AATAAA	-17
PB.8303.2	chr3	-	3297	18	novel_not_in_catalog	AC112128.1	novel	6837	39	NA	NA	274	-82737	intron_retention	FALSE	canonical	1	1360	junction_14	45238.128668017234	NA	2	1	TRUE	NA	NA	NA	B	coding	848	2547	82	2628	40.0	278	False	AATAAA	-18
PB.8303.1	chr3	-	3351	18	novel_in_catalog	AC112128.1	novel	6837	39	NA	NA	-36	-82731	intron_retention	FALSE	canonical	1	42466	junction_17	28836.087157117418	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	109	2676	35.0	-32	True	AATAAA	-24
PB.8303.7	chr3	-	3082	18	incomplete-splice_match	AC112128.1	ENST00000649772.1	6837	39	-22	82986	-22	-82986	3prime_fragment	FALSE	canonical	1	42466	junction_17	28836.087157117418	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	95	2662	25.0	-18	True	AATAAA	-19
PB.8303.6	chr3	-	3279	18	full-splice_match	SPICE1	ENST00000295872.8	5417	18	-31	2169	0	367	multi-exon	FALSE	canonical	1	24029	junction_17	31972.75607315539	NA	0	NA	TRUE	NA	NA	NA	C	coding	855	2568	292	2859	25.0	-32	True	AATAAA	-19
PB.1977.1	chr11	+	5870	26	novel_in_catalog	MYRF	novel	1392	2	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	1	40426	junction_18	35839.30066393595	NA	0	NA	TRUE	NA	NA	NA	A	coding	1119	3360	137	3496	5.0	-27	True	NA	NA
PB.8303.4	chr3	-	3338	18	full-splice_match	SPICE1	ENST00000295872.8	5417	18	11	2068	11	468	multi-exon	FALSE	canonical	1	24029	junction_17	31972.75607315539	NA	1	1	TRUE	NA	NA	NA	C	coding	855	2568	250	2817	45.0	10	True	AATATA	-8
PB.4946.1	chr17	+	2139	1	antisense	novelGene_FBXL20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10933.1	chr7	-	1322	3	full-splice_match	TMUB1	ENST00000297533.8	1353	3	25	6	25	0	multi-exon	FALSE	canonical	1	345651	junction_2	296901.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	246	741	119	859	15.0	5979	False	ATTAAA	-18
PB.5474.1	chr18	-	1160	3	full-splice_match	C18orf32	ENST00000318240.7	1128	3	-26	-6	-5	6	multi-exon	FALSE	canonical	1	223840	junction_2	484419.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-24	True	ATTAAA	-23
PB.5474.2	chr18	-	990	3	full-splice_match	C18orf32	ENST00000613385.4	5395	3	-5	4410	-5	0	multi-exon	FALSE	canonical	1	202540	junction_2	495069.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	75	305	25.0	-24	True	ATTAAA	-17
PB.8282.3	chr3	+	1784	2	full-splice_match	DUBR	ENST00000466734.5	2737	2	0	953	0	-953	multi-exon	FALSE	canonical	1	38165	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	19	60	412	471	15.0	0	True	GATAAA	-42
PB.9434.9	chr5	-	2720	14	incomplete-splice_match	FNIP1	ENST00000510461.5	3845	18	0	27383	0	5777	3prime_fragment	FALSE	canonical	1	48353	junction_8	38407.26502065545	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2622	97	2718	70.0	-1	True	AGTAAA	-42
PB.2029.4	chr11	+	3062	17	novel_in_catalog	RPS6KA4	novel	3121	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	44637	junction_7	113734.23024527126	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	1132	2328	5.0	1	True	AATAAA	-25
PB.2029.5	chr11	+	2933	16	novel_in_catalog	RPS6KA4	novel	3121	17	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	18712	junction_8	123236.17488809398	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	45	2198	0.0	-1661	False	AATAAA	-26
PB.2029.2	chr11	+	3127	17	full-splice_match	RPS6KA4	ENST00000334205.8	3119	17	-9	1	-9	-1	multi-exon	FALSE	canonical	1	268092	junction_1	77062.67893085472	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	75	2393	5.0	-9	True	AATAAA	-25
PB.2029.3	chr11	+	3106	17	novel_not_in_catalog	RPS6KA4	novel	3121	17	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	14661	junction_14	120311.04422288088	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	75	2372	5.0	-9	True	AATAAA	-25
PB.2029.1	chr11	+	3110	17	full-splice_match	RPS6KA4	ENST00000528057.5	3121	17	10	1	10	-1	multi-exon	FALSE	canonical	1	50546	junction_10	113179.80632714478	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	79	2376	5.0	-13	True	AATAAA	-25
PB.3071.2	chr13	+	1317	9	full-splice_match	GTF3A	ENST00000381140.8	1383	9	71	-5	-23	5	multi-exon	FALSE	canonical	1	1377648	junction_1	363819.29088643636	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	829	1221	20.0	-8	True	ATTAAA	-21
PB.3071.3	chr13	+	3455	8	novel_in_catalog	GTF3A	novel	1383	9	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	1558712	junction_1	315427.9681898994	NA	1	NA	TRUE	NA	NA	NA	C	coding	25	78	353	430	30.0	0	True	ATTAAA	-14
PB.3071.1	chr13	+	1539	10	novel_not_in_catalog	GTF3A	novel	1383	9	NA	NA	-26	6	any annotated donor/acceptor	FALSE	canonical	1	33489	junction_2	871771.1135010804	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	639	1442	20.0	-11	True	ATTAAA	-22
PB.3071.4	chr13	+	2702	9	full-splice_match	GTF3A	ENST00000470606.5	1919	9	-787	4	-14	-4	multi-exon	FALSE	canonical	1	31095	junction_1	721293.2248274189	NA	2	NA	TRUE	NA	NA	NA	C	coding	25	78	352	429	30.0	1	True	ATTAAA	-12
PB.3071.5	chr13	+	5321	3	novel_in_catalog	GTF3A	novel	1383	9	NA	NA	8	464	intron_retention	FALSE	canonical	1	1558712	junction_1	239511.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	23	True	NA	NA
PB.11469.5	chr9	-	4202	9	novel_not_in_catalog	BNC2	novel	12844	7	NA	NA	-3	-14	intron_retention	FALSE	canonical	1	56	junction_7	19653.47588492618	NA	2	NA	TRUE	NA	NA	NA	B	coding	864	2595	1201	3795	75.0	2	True	NA	NA
PB.11469.4	chr9	-	3605	6	novel_in_catalog	BNC2	novel	12844	7	NA	NA	35	-13	combination_of_known_junctions	FALSE	canonical	1	3665	junction_5	18155.271626720434	NA	3	NA	TRUE	NA	NA	NA	B	coding	1057	3174	24	3197	80.0	-2	True	NA	NA
PB.11469.3	chr9	-	3721	6	novel_not_in_catalog	BNC2	novel	12844	7	NA	NA	-16	-13	intron_retention	FALSE	non_canonical	0	0	junction_1	19381.581499970533	NA	1	NA	TRUE	NA	NA	NA	B	coding	993	2982	374	3355	80.0	-11	True	NA	NA
PB.11469.2	chr9	-	3842	7	novel_not_in_catalog	BNC2	novel	12844	7	NA	NA	5	-13	intron_retention	FALSE	canonical	1	1126	junction_2	21154.570141907607	NA	2	NA	TRUE	NA	NA	NA	B	coding	801	2406	353	2758	80.0	170	False	NA	NA
PB.4257.4	chr16	+	2282	15	incomplete-splice_match	SNX29	ENST00000566228.5	8171	21	-3	295825	-2	142727	3prime_fragment	FALSE	canonical	1	79414	junction_1	19444.546387334	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	73	1890	90.0	1	True	NA	NA
PB.9025.3	chr4	+	4649	14	full-splice_match	FAM160A1	ENST00000435205.5	4576	14	-66	-7	-36	7	multi-exon	FALSE	canonical	1	12583	junction_2	9514.566011053696	NA	4	NA	TRUE	NA	NA	NA	C	coding	1039	3120	645	3764	15.0	4	True	TATAAA	-26
PB.313.1	chr1	+	4339	10	full-splice_match	PPIE	ENST00000324379.9	1277	10	-11	-3051	-8	3042	multi-exon	TRUE	canonical	1	442834	junction_1	123472.55745346319	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	31	936	45.0	-21	True	NA	NA
PB.313.3	chr1	+	2564	9	novel_in_catalog	PPIE	novel	947	8	NA	NA	1	-9	intron_retention	FALSE	canonical	1	442834	junction_1	130247.50625995685	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	1568	2221	15.0	-12	True	AATAAA	-12
PB.313.2	chr1	+	1277	10	full-splice_match	PPIE	ENST00000324379.9	1277	10	-2	2	1	-2	multi-exon	FALSE	canonical	1	442834	junction_1	123472.55745346319	NA	1	1	TRUE	NA	NA	NA	C	coding	301	906	22	927	5.0	-12	True	AATAAA	-19
PB.3052.3	chr13	-	4658	14	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	1047	junction_1	81113.78750676304	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	193	1155	25.0	-96	True	AATAAA	-17
PB.3052.2	chr13	-	4696	14	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	1047	junction_1	66904.8377000396	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	198	1295	25.0	-101	True	AATAAA	-17
PB.3052.1	chr13	-	4854	13	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	-3	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	85198.2714226628	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	2	1267	25.0	-106	False	AATAAA	-17
PB.3052.7	chr13	-	5396	13	full-splice_match	ZDHHC20	ENST00000400590.7	1869	13	24	-3551	23	0	multi-exon	FALSE	canonical	1	1172	junction_7	65229.37049297443	NA	2	NA	TRUE	NA	NA	NA	C	coding	365	1098	176	1273	25.0	-79	True	AATAAA	-17
PB.3052.6	chr13	-	4633	13	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	1047	junction_1	83956.97570031365	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	13	1281	20.0	-117	False	AATAAA	-16
PB.3052.5	chr13	-	4503	13	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	84058.82422132861	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	197	1264	25.0	-100	True	AATAAA	-17
PB.3052.4	chr13	-	4588	14	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66718.2189777435	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	6	1301	25.0	-110	False	AATAAA	-17
PB.2152.1	chr11	-	6554	8	full-splice_match	FAM168A	ENST00000356467.4	1767	8	64	-4851	-21	-645	multi-exon	FALSE	canonical	1	154024	junction_5	43326.96175899374	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	216	923	75.0	-8	True	TTTAAA	-22
PB.3052.9	chr13	-	2330	6	novel_not_in_catalog	ZDHHC20	novel	5338	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	42126.07158233485	NA	2	NA	TRUE	NA	NA	NA	C	coding	163	492	200	691	25.0	-103	True	AATAAA	-17
PB.3052.8	chr13	-	5332	12	full-splice_match	ZDHHC20	ENST00000382466.7	5338	12	6	0	6	0	multi-exon	FALSE	canonical	1	1172	junction_6	84213.93063173268	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	193	1257	25.0	-96	True	AATAAA	-17
PB.4271.20	chr16	+	2318	6	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-53	1416	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	145904.23199016537	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	12	656	35.0	-7855	False	AATAAA	-9
PB.472.20	chr1	-	2582	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	-25	1512	-13	174	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	340	1965	40.0	-26	True	ATTAAA	-21
PB.472.21	chr1	-	2406	5	incomplete-splice_match	ANKRD13C	ENST00000370944.8	4069	13	-22	51796	-10	-6698	3prime_fragment	FALSE	canonical	1	168349	junction_4	6515.242244153321	NA	3	NA	TRUE	NA	NA	NA	C	coding	265	798	337	1134	85.0	-23	True	NA	NA
PB.3700.5	chr14	+	2450	6	full-splice_match	CLBA1	ENST00000389964.7	1962	6	-488	0	-2	0	multi-exon	FALSE	canonical	1	8861	junction_2	27037.0887589622	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	642	1235	15.0	-1	True	AATAAA	-12
PB.3700.4	chr14	+	4234	5	novel_in_catalog	CLBA1	novel	790	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	8861	junction_2	25733.698611936838	NA	5	NA	TRUE	NA	NA	NA	C	coding	197	594	643	1236	15.0	-2	True	AATAAA	-12
PB.11769.5	chr9	-	3504	6	full-splice_match	RBM18	ENST00000417201.3	4974	6	4	1466	4	-1466	multi-exon	FALSE	canonical	1	264840	junction_2	32179.948280878267	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	138	710	55.0	-15	True	AATATA	-25
PB.3700.1	chr14	+	2397	5	full-splice_match	CLBA1	ENST00000547315.5	2370	5	-26	-1	-8	1	multi-exon	FALSE	canonical	1	41275	junction_2	11764.044606341817	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	666	1643	15.0	-25	True	AATAAA	-11
PB.3700.3	chr14	+	4779	4	novel_in_catalog	CLBA1	novel	790	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	66090	junction_1	1944.8713753527934	NA	2	NA	TRUE	NA	NA	NA	C	coding	190	573	645	1217	15.0	-4	True	AATAAA	-12
PB.3700.2	chr14	+	3006	5	novel_in_catalog	CLBA1	novel	790	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	17874	junction_2	21840.817376817653	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	656	1228	15.0	-15	True	AATAAA	-11
PB.4756.1	chr17	-	812	4	full-splice_match	TRAPPC1	ENST00000303731.8	811	4	-1	0	-1	0	multi-exon	FALSE	canonical	1	2496339	junction_3	295571.8916116499	NA	0	NA	TRUE	NA	NA	NA	A	coding	145	438	118	555	5.0	-1	True	AATAAA	-16
PB.4953.18	chr17	-	2433	8	full-splice_match	IKZF3	ENST00000346872.7	9667	8	-4	7238	-4	331	multi-exon	FALSE	canonical	1	44308	junction_7	18746.946901361003	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	67	1596	80.0	20	True	TATAAA	-29
PB.4953.19	chr17	-	2782	4	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	8	-54698	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	33002.371241405606	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	32	True	NA	NA
PB.1611.17	chr10	-	5305	17	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	21	-9	any annotated donor/acceptor	FALSE	canonical	1	14847	junction_13	290921.39822918666	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	901	3306	15.0	-3	True	AATAAA	-11
PB.4953.14	chr17	-	3115	4	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	0	2014	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45940.68059525844	NA	2	1	TRUE	NA	NA	NA	C	coding	262	789	374	1162	25.0	0	True	ATTAAA	-20
PB.4953.15	chr17	-	2996	4	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	106	2014	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45940.68059525844	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	268	1056	25.0	-1	True	ATTAAA	-20
PB.4953.16	chr17	-	3540	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	-8	2013	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	71	1600	25.0	16	True	ATTAAA	-19
PB.4953.17	chr17	-	2926	8	full-splice_match	IKZF3	ENST00000346872.7	9667	8	-3	6744	-3	825	multi-exon	FALSE	canonical	1	44308	junction_7	18746.946901361003	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	66	1595	15.0	21	True	NA	NA
PB.4953.10	chr17	-	2549	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	15	-2454	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	48	1577	95.0	39	True	NA	NA
PB.4953.11	chr17	-	3457	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	-90	-3608	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	5	1	TRUE	NA	NA	NA	C	coding	509	1530	153	1682	80.0	-7	True	AATAGA	-37
PB.4953.12	chr17	-	2471	4	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	270	-3608	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	45940.68059525844	NA	5	NA	TRUE	NA	NA	NA	C	coding	262	789	104	892	80.0	16	True	AATAGA	-37
PB.4953.13	chr17	-	2129	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	17	-3608	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	46	1575	80.0	41	True	AATAGA	-37
PB.7925.3	chr3	+	2314	17	novel_in_catalog	IL17RC	novel	2342	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	79221	junction_16	58402.421966814385	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	208	2286	10.0	0	True	AATAAA	-24
PB.7889.2	chr22	+	3183	2	full-splice_match	ADM2	ENST00000395738.2	4276	2	-1	1094	-1	-1094	multi-exon	FALSE	canonical	1	33126	junction_1	0.0	NA	29	NA	TRUE	NA	NA	NA	C	coding	232	699	544	1242	60.0	12	True	NA	NA
PB.7889.1	chr22	+	4304	2	full-splice_match	ADM2	ENST00000395738.2	4276	2	-33	5	-33	-5	multi-exon	FALSE	canonical	1	33126	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	576	1274	40.0	-20	True	NA	NA
PB.7925.4	chr3	+	2339	18	full-splice_match	IL17RC	ENST00000413608.2	2147	18	-189	-3	2	-1	multi-exon	FALSE	canonical	1	74409	junction_7	72218.28776745046	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	190	2313	15.0	18	True	AATAAA	-22
PB.425.2	chr1	-	1318	8	full-splice_match	TMEM59	ENST00000371341.5	1116	8	83	-285	-9	-5	multi-exon	FALSE	canonical	1	193949	junction_7	945085.8647294154	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	280	849	40.0	-10	True	ATTAAA	-11
PB.7660.8	chr22	+	2250	6	incomplete-splice_match	SPECC1L	ENST00000314328.13	6756	17	-2	93496	-2	-60	3prime_fragment	FALSE	canonical	1	58149	junction_1	120980.6828094469	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1962	288	2249	65.0	-43	True	NA	NA
PB.7660.9	chr22	+	4570	16	novel_in_catalog	SPECC1L	novel	6674	16	NA	NA	-2	-488	combination_of_known_junctions	FALSE	canonical	1	20213	junction_4	90914.18408108214	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	587	1942	15.0	-43	True	ATTAAA	-15
PB.12119.11	chrX	-	3442	8	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	735	junction_3	20750.445096775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	465	980	30.0	-39	True	AATAAA	-14
PB.7660.2	chr22	+	2251	5	incomplete-splice_match	SPECC1L	ENST00000421374.5	2565	7	-20	6088	-15	9	3prime_fragment	FALSE	canonical	1	135054	junction_1	79402.47191681125	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2031	220	2250	65.0	-79	True	NA	NA
PB.7660.3	chr22	+	2561	7	full-splice_match	SPECC1L	ENST00000421374.5	2565	7	-18	22	-13	-22	multi-exon	FALSE	canonical	1	135054	junction_1	73158.95293734656	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2343	218	2560	65.0	-77	True	NA	NA
PB.7660.1	chr22	+	1498	5	incomplete-splice_match	SPECC1L	ENST00000314328.13	6756	17	-54	95601	-31	451	3prime_fragment	FALSE	canonical	1	58149	junction_1	119782.68196300331	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1158	340	1497	20.0	2	True	NA	NA
PB.7660.6	chr22	+	6303	17	novel_not_in_catalog	SPECC1L	novel	6674	16	NA	NA	9	-495	any annotated donor/acceptor	FALSE	canonical	1	8267	junction_2	110781.88110876297	NA	1	NA	TRUE	NA	NA	NA	C	coding	1163	3492	191	3682	35.0	-50	True	ATTAAA	-8
PB.7660.7	chr22	+	6043	15	full-splice_match	SPECC1L	ENST00000541492.1	3525	15	-47	-2471	-4	-495	multi-exon	FALSE	canonical	1	6825	junction_13	96511.69608965558	NA	0	NA	TRUE	NA	NA	NA	C	coding	1078	3237	186	3422	35.0	-45	True	ATTAAA	-8
PB.7660.4	chr22	+	1759	4	incomplete-splice_match	SPECC1L	ENST00000416735.5	566	5	-61	1764	0	852	3prime_fragment	FALSE	canonical	1	135054	junction_1	82638.58017092662	NA	2	NA	TRUE	NA	NA	NA	C	coding	520	1560	200	1759	60.0	-59	True	NA	NA
PB.7660.5	chr22	+	6662	16	full-splice_match	SPECC1L	ENST00000437398.5	6674	16	12	0	7	0	multi-exon	FALSE	canonical	1	135054	junction_1	61366.62303022167	NA	2	NA	TRUE	NA	NA	NA	C	coding	1117	3354	193	3546	5.0	-52	True	GATAAA	-16
PB.11489.4	chr9	-	2532	14	full-splice_match	PLAA	ENST00000397292.7	4234	14	197	1505	-33	295	multi-exon	FALSE	canonical	1	230625	junction_13	55216.964530839614	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2310	222	2531	55.0	6974	False	NA	NA
PB.11211.9	chr8	-	1928	7	novel_in_catalog	ZFAND1	novel	2719	4	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	46615	junction_6	189859.98937082267	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	471	956	10.0	1	True	AATAAA	-13
PB.702.7	chr1	-	5351	25	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	13825.850358052627	NA	7	NA	TRUE	NA	NA	NA	B	coding	898	2697	1138	3834	15.0	NA	False	ATTAAA	-15
PB.5676.1	chr19	-	2040	9	incomplete-splice_match	KANK3	ENST00000330915.7	2787	11	8118	-1	-362	1	5prime_fragment	FALSE	canonical	1	36111	junction_7	15607.719003749395	NA	36	1	TRUE	NA	NA	NA	A	coding	389	1170	615	1784	0.0	8117	False	AATAAA	-14
PB.3866.4	chr15	-	8485	33	incomplete-splice_match	DMXL2	ENST00000543779.6	10400	43	-172	15294	26	-6	3prime_fragment	FALSE	canonical	1	50067	junction_32	39625.842706683776	NA	1	NA	TRUE	NA	NA	NA	B	coding	2644	7935	263	8197	40.0	-1	True	AATAAA	-28
PB.3866.3	chr15	-	10633	44	novel_in_catalog	DMXL2	novel	10672	43	NA	NA	21	-1	combination_of_known_junctions	TRUE	canonical	1	50067	junction_43	57153.570112889705	NA	0	NA	TRUE	NA	NA	NA	B	coding	3057	9174	268	9441	20.0	-6	True	AATAAA	-14
PB.11093.10	chr8	-	1711	7	full-splice_match	PLPP5	ENST00000424479.6	2130	7	18	401	-1	-393	multi-exon	FALSE	canonical	1	179608	junction_1	86927.12372521531	NA	2	NA	TRUE	NA	NA	NA	C	coding	264	795	4	798	75.0	11	True	CATAAA	-23
PB.8038.19	chr3	+	2915	14	novel_in_catalog	CTNNB1	novel	3278	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	6632	junction_13	824885.330906354	NA	2	NA	TRUE	NA	NA	NA	C	coding	693	2082	215	2296	10.0	0	True	ATTAAA	-15
PB.780.48	chr1	-	6255	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-16	-62	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	392845.4755910805	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	946	3741	15.0	-17	True	NA	NA
PB.780.49	chr1	-	6214	15	full-splice_match	ADAR	ENST00000649724.1	6425	15	26	185	-1	-62	multi-exon	FALSE	canonical	1	35589	junction_14	349423.35708870814	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	905	3700	15.0	-20	True	NA	NA
PB.4724.2	chr17	-	1997	5	novel_in_catalog	PHF23	novel	2037	5	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	17270	junction_4	220239.77048208163	NA	3	NA	TRUE	NA	NA	NA	C	coding	273	822	580	1401	10.0	-29	True	AATAAA	-25
PB.4724.3	chr17	-	1584	5	novel_not_in_catalog	PHF23	novel	2037	5	NA	NA	-52	3	intron_retention	FALSE	canonical	1	6000	junction_4	224692.85760956	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	421	1242	10.0	4367	False	TATAAA	-21
PB.8397.24	chr3	+	3664	28	full-splice_match	ATP2C1	ENST00000508532.5	4969	28	156	1149	-31	659	multi-exon	FALSE	canonical	1	32044	junction_1	242080.2703752739	NA	2	NA	TRUE	NA	NA	NA	C	coding	919	2760	254	3013	25.0	11	True	AGTAAA	-24
PB.4724.1	chr17	-	1979	5	full-splice_match	PHF23	ENST00000320316.7	2037	5	48	10	-3	0	multi-exon	FALSE	canonical	1	248823	junction_4	135424.52248462057	NA	6	NA	TRUE	NA	NA	NA	C	coding	403	1212	180	1391	15.0	-20	True	AATAAA	-17
PB.1226.19	chr1	-	4398	30	incomplete-splice_match	HEATR1	ENST00000366582.7	8447	45	-9	17675	-9	7316	3prime_fragment	FALSE	canonical	1	193779	junction_21	48342.1060554988	NA	0	NA	TRUE	NA	NA	NA	C	coding	1424	4272	125	4396	30.0	-26	True	NA	NA
PB.780.43	chr1	-	6476	15	full-splice_match	ADAR	ENST00000647597.1	6667	15	-39	230	-39	-62	multi-exon	FALSE	canonical	1	265041	junction_14	298501.2048436355	NA	2	NA	TRUE	NA	NA	NA	C	coding	1226	3681	282	3962	15.0	1	True	NA	NA
PB.4724.4	chr17	-	1753	5	full-splice_match	PHF23	ENST00000320316.7	2037	5	28	256	-23	3	multi-exon	FALSE	canonical	1	248823	junction_4	135424.52248462057	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	200	1411	10.0	-40	True	TATAAA	-21
PB.4724.5	chr17	-	1754	5	novel_in_catalog	PHF23	novel	2037	5	NA	NA	-32	-1	intron_retention	FALSE	canonical	1	17270	junction_4	220239.77048208163	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	595	1416	15.0	4706	False	TATAAA	-17
PB.8921.9	chr4	+	4349	5	novel_not_in_catalog	CYP2U1	novel	4944	5	NA	NA	-9	2	any annotated donor/acceptor	FALSE	canonical	1	2114	junction_2	36092.147922886215	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	69	1313	25.0	27	True	ATTAAA	-12
PB.11093.13	chr8	-	1676	5	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	54856	junction_1	140576.00227168042	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	5	325	40.0	10	True	AATAAA	-15
PB.2037.1	chr11	+	1935	8	full-splice_match	SNX15	ENST00000377244.7	1939	8	6	-2	6	2	multi-exon	FALSE	canonical	1	162763	junction_5	60785.79599222308	NA	2	NA	TRUE	NA	NA	NA	A	coding	342	1029	125	1153	30.0	-25	True	NA	NA
PB.9186.6	chr5	-	4529	35	full-splice_match	NUP155	ENST00000381843.6	4200	35	-329	0	-11	0	multi-exon	FALSE	canonical	1	16889	junction_34	90798.52580964638	NA	0	NA	TRUE	NA	NA	NA	C	coding	1332	3999	470	4468	30.0	349	False	AATAAA	-18
PB.9186.5	chr5	-	4477	35	full-splice_match	NUP155	ENST00000231498.7	8143	35	79	3587	1	-91	multi-exon	FALSE	canonical	1	221976	junction_34	73699.37499615265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1382	4149	153	4301	20.0	-13	True	AATGAA	-16
PB.11093.15	chr8	-	2104	2	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	260765	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	24	344	25.0	-9	True	NA	NA
PB.11477.4	chr9	-	3389	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	83	3300	-20	111	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	205	1911	70.0	-7	True	NA	NA
PB.11477.5	chr9	-	3277	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	84	3411	-19	0	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	2	NA	TRUE	NA	NA	NA	C	coding	568	1707	204	1910	75.0	-6	True	AAGAAA	-14
PB.11477.6	chr9	-	3246	11	full-splice_match	MLLT3	ENST00000630269.2	2040	11	-83	-1123	-83	0	multi-exon	FALSE	canonical	1	10010	junction_10	85233.95516629508	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	182	1879	75.0	-19	True	AAGAAA	-14
PB.2396.4	chr12	+	2916	10	novel_in_catalog	TULP3	novel	978	9	NA	NA	0	4	intron_retention	FALSE	canonical	1	34182	junction_2	62931.5573892153	NA	3	NA	TRUE	NA	NA	NA	C	coding	230	693	534	1226	25.0	0	True	AATAAA	-15
PB.2396.3	chr12	+	2173	10	novel_in_catalog	TULP3	novel	978	9	NA	NA	-5	-17	intron_retention	FALSE	canonical	1	7798	junction_8	70323.05076652399	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	67	1296	85.0	-9	True	NA	NA
PB.2396.2	chr12	+	2284	11	full-splice_match	TULP3	ENST00000448120.6	3076	11	-27	819	-17	-17	multi-exon	FALSE	canonical	1	125164	junction_2	39782.135366141425	NA	2	NA	TRUE	NA	NA	NA	C	coding	442	1329	79	1407	85.0	-47	False	NA	NA
PB.2396.1	chr12	+	3076	11	full-splice_match	TULP3	ENST00000448120.6	3076	11	-6	6	0	4	multi-exon	FALSE	canonical	1	125164	junction_2	39782.135366141425	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	58	1386	25.0	0	True	AATAAA	-15
PB.11477.3	chr9	-	4309	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	43	2420	18	991	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	6	NA	TRUE	NA	NA	NA	C	coding	568	1707	245	1951	45.0	-2	True	AATAAA	-21
PB.11477.8	chr9	-	3074	11	novel_not_in_catalog	MLLT3	novel	6772	11	NA	NA	10	-214	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	89504.77784922993	NA	3	1	TRUE	NA	NA	NA	C	coding	369	1110	813	1922	30.0	-10	True	ATTAAA	-14
PB.11477.9	chr9	-	2945	11	full-splice_match	MLLT3	ENST00000380338.8	6772	11	15	3812	-10	-400	multi-exon	FALSE	canonical	1	117409	junction_10	64703.683366559584	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	273	1979	60.0	1141	False	AAAAAG	-20
PB.9186.2	chr5	-	5377	36	novel_not_in_catalog	NUP155	novel	8143	35	NA	NA	-5	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93734.51190608853	NA	1	NA	TRUE	NA	NA	NA	C	coding	1382	4149	159	4307	30.0	-19	True	AATAAA	-11
PB.9651.1	chr5	-	2531	16	novel_in_catalog	DDX41	novel	686	3	NA	NA	-3	3	intron_retention	FALSE	canonical	1	565992	junction_14	161283.98992868312	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	1106	2314	0.0	-4	True	ATTAAA	-22
PB.9651.2	chr5	-	2087	17	full-splice_match	DDX41	ENST00000507955.5	2607	17	519	1	0	0	multi-exon	FALSE	canonical	1	565992	junction_15	157789.00233420896	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	6	1874	5.0	10	True	ATTAAA	-18
PB.9651.3	chr5	-	2168	17	novel_in_catalog	DDX41	novel	686	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6813	junction_11	254285.71982079005	NA	26	1	TRUE	NA	NA	NA	C	coding	402	1209	747	1955	5.0	10	True	ATTAAA	-18
PB.9651.6	chr5	-	2967	13	full-splice_match	DDX41	ENST00000505081.5	2949	13	-19	1	-8	-1	multi-exon	FALSE	canonical	1	565992	junction_11	168788.35893827627	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	2147	2755	5.0	-9	True	ATTAAA	-17
PB.9651.7	chr5	-	2759	14	novel_in_catalog	DDX41	novel	686	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	565992	junction_12	162171.7215003606	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	1339	2547	5.0	-1	True	ATTAAA	-17
PB.9651.8	chr5	-	2346	14	novel_in_catalog	DDX41	novel	686	3	NA	NA	4	-1	intron_retention	FALSE	canonical	1	565992	junction_13	155544.48658253642	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	728	2134	5.0	69	False	ATTAAA	-17
PB.11223.1	chr8	-	2657	1	genic	AF117829.1	novel	NA	NA	NA	NA	5249	157	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-23	True	NA	NA
PB.9686.1	chr5	-	2854	2	full-splice_match	TRIM52	ENST00000510796.1	633	2	-888	-1333	-6	-4	multi-exon	FALSE	canonical	1	23435	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	333	1196	30.0	-3	True	AATAAA	-16
PB.9311.9	chr5	-	4475	4	novel_in_catalog	LHFPL2	novel	4680	3	NA	NA	9	-14	no_combination_of_known_junctions	FALSE	canonical	1	4958	junction_1	53419.608892449054	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	6	True	ATTAAA	-17
PB.9686.2	chr5	-	5982	1	full-splice_match	TRIM52	ENST00000612671.1	4753	1	4	-1233	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	286	861	323	1183	35.0	7	True	AATAAA	-13
PB.7163.2	chr20	+	1630	13	full-splice_match	CDS2	ENST00000460006.5	9298	13	232	7436	9	-903	multi-exon	FALSE	canonical	1	256937	junction_1	86488.640957771	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	76	1413	40.0	0	True	AGTAAA	-18
PB.7163.3	chr20	+	2421	13	full-splice_match	CDS2	ENST00000460006.5	9298	13	166	6711	25	-178	multi-exon	FALSE	canonical	1	256937	junction_1	86488.640957771	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	142	1479	5.0	30	True	NA	NA
PB.7163.1	chr20	+	2545	13	full-splice_match	CDS2	ENST00000460006.5	9298	13	246	6507	-16	26	multi-exon	FALSE	canonical	1	256937	junction_1	86488.640957771	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	62	1399	5.0	14	True	TTTAAA	-23
PB.7163.6	chr20	+	9095	13	full-splice_match	CDS2	ENST00000460006.5	9298	13	203	0	-20	0	multi-exon	FALSE	canonical	1	256937	junction_1	86488.640957771	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	105	1442	15.0	-92	False	AATAAA	-17
PB.7163.7	chr20	+	2101	10	incomplete-splice_match	CDS2	ENST00000460006.5	9298	13	227	10008	4	0	3prime_fragment	FALSE	canonical	1	256937	junction_1	83268.70533399688	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	81	1085	95.0	-5	True	NA	NA
PB.7163.4	chr20	+	3875	13	full-splice_match	CDS2	ENST00000460006.5	9298	13	201	5222	-22	1311	multi-exon	FALSE	canonical	1	256937	junction_1	86488.640957771	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	107	1444	10.0	-94	False	AATAAA	-18
PB.7163.5	chr20	+	2798	13	full-splice_match	CDS2	ENST00000460006.5	9298	13	158	6342	17	191	multi-exon	FALSE	canonical	1	256937	junction_1	86488.640957771	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	150	1487	15.0	22	True	AATATA	-17
PB.8848.17	chr4	-	2074	8	novel_in_catalog	HNRNPDL	novel	3781	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	467907	junction_1	1378157.1718302462	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	108	1013	10.0	-3	True	AATAAA	-15
PB.8848.16	chr4	-	2915	9	novel_not_in_catalog	HNRNPDL	novel	3781	8	NA	NA	-54	0	intron_retention	FALSE	canonical	1	6156	junction_8	1862513.2243768768	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	1718	2533	10.0	-50	True	AATAAA	-15
PB.8848.15	chr4	-	2924	6	novel_not_in_catalog	HNRNPDL	novel	3781	8	NA	NA	299	0	intron_retention	FALSE	canonical	1	23546	junction_5	1650738.1895797527	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	1027	1494	10.0	1621	False	AATAAA	-15
PB.8921.2	chr4	+	3183	5	novel_not_in_catalog	CYP2U1	novel	4944	5	NA	NA	-36	599	any annotated donor/acceptor	FALSE	canonical	1	2114	junction_2	36092.147922886215	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	96	1340	45.0	0	True	ATTAAA	-10
PB.8848.13	chr4	-	2276	6	novel_in_catalog	HNRNPDL	novel	3781	8	NA	NA	2	1	intron_retention	FALSE	canonical	1	149628	junction_1	1671145.4054784582	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	107	841	15.0	-2	True	AATAAA	-20
PB.8848.12	chr4	-	4066	6	incomplete-splice_match	HNRNPDL	ENST00000507721.5	2404	7	-866	5	-38	0	intron_retention	FALSE	canonical	1	2760139	junction_1	609477.0107333008	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	1822	2637	10.0	-19	True	AATAAA	-14
PB.8848.11	chr4	-	2101	8	full-splice_match	HNRNPDL	ENST00000602300.5	1291	8	-810	0	-26	0	multi-exon	FALSE	canonical	1	569982	junction_1	1345585.6453053579	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	562	1824	10.0	-7	True	AATAAA	-15
PB.5452.20	chr18	+	4112	23	full-splice_match	ELP2	ENST00000442325.6	2722	23	25	-1415	-1	1034	multi-exon	FALSE	canonical	1	32560	junction_6	183451.25950363785	NA	133	8	TRUE	NA	NA	NA	C	coding	891	2676	12	2687	35.0	20	True	NA	NA
PB.8921.5	chr4	+	3572	5	full-splice_match	CYP2U1	ENST00000332884.10	4944	5	182	1190	-34	600	multi-exon	FALSE	canonical	1	49286	junction_1	17027.230490819697	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	94	1728	45.0	2	True	ATTAAA	-11
PB.11808.1	chr9	-	2827	15	full-splice_match	ENG	ENST00000373203.8	3048	15	216	5	96	0	multi-exon	FALSE	canonical	1	422774	junction_14	219483.8755420641	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	186	2162	15.0	215	False	AATAAA	-16
PB.7778.1	chr22	-	2268	14	full-splice_match	DMC1	ENST00000216024.6	2371	14	103	0	1	0	multi-exon	FALSE	canonical	1	2474	junction_6	12046.321541715151	NA	1	NA	TRUE	NA	NA	NA	A	coding	340	1023	175	1197	40.0	-1	True	AATAAA	-19
PB.2027.1	chr11	+	2204	5	novel_in_catalog	PRDX5	novel	893	6	NA	NA	35	-1	intron_retention	FALSE	canonical	1	4283590	junction_3	656316.8837567624	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-38	True	AATAAA	-19
PB.5826.6	chr19	-	2199	9	incomplete-splice_match	JAK3	ENST00000534444.1	3612	23	3585	8946	15	-464	internal_fragment	FALSE	canonical	1	79982	junction_4	7947.162857547025	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	16	1482	100.0	3598	False	NA	NA
PB.11124.12	chr8	+	3115	17	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	1	4	any annotated donor/acceptor	FALSE	canonical	1	3346	junction_13	411602.62744103005	NA	2	1	TRUE	NA	NA	NA	C	coding	670	2013	88	2100	100.0	-15	True	NA	NA
PB.5826.1	chr19	-	3769	23	novel_in_catalog	INSL3	novel	755	2	NA	NA	-22858	0	no_combination_of_known_junctions	FALSE	canonical	1	4460	junction_1	38034.3865975686	NA	0	NA	TRUE	NA	NA	NA	A	coding	1131	3396	16	3411	15.0	3598	False	AATAAA	-14
PB.5826.3	chr19	-	5382	24	full-splice_match	JAK3	ENST00000458235.5	5432	24	50	0	9	0	multi-exon	FALSE	canonical	1	53641	junction_23	32176.515039437934	NA	3	NA	TRUE	NA	NA	NA	C	coding	1124	3375	51	3425	30.0	-1	True	NA	NA
PB.1628.1	chr10	+	1674	5	full-splice_match	BORCS7	ENST00000339834.9	2422	5	-2	750	-2	-2	multi-exon	FALSE	canonical	1	224037	junction_1	89740.28663036463	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	70	387	35.0	-41	False	AATAAA	-21
PB.1628.2	chr10	+	1827	5	full-splice_match	BORCS7	ENST00000339834.9	2422	5	39	556	0	192	multi-exon	FALSE	canonical	1	224037	junction_1	89740.28663036463	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	29	346	40.0	0	True	ATTAAA	-14
PB.1628.3	chr10	+	2234	5	full-splice_match	BORCS7	ENST00000339834.9	2422	5	36	152	-3	-152	multi-exon	FALSE	canonical	1	224037	junction_1	89740.28663036463	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	32	349	55.0	-3	True	AATAAA	-37
PB.1628.4	chr10	+	2073	5	full-splice_match	BORCS7	ENST00000339834.9	2422	5	36	313	-3	-313	multi-exon	FALSE	canonical	1	224037	junction_1	89740.28663036463	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	32	349	30.0	-3	True	NA	NA
PB.11124.14	chr8	+	4043	17	full-splice_match	MCM4	ENST00000649973.1	4062	17	16	3	-1	-3	multi-exon	FALSE	canonical	1	413119	junction_2	251415.87070584335	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	73	2664	30.0	0	True	AATAAA	-18
PB.12195.1	chrX	+	2004	1	full-splice_match	TCEAL9	ENST00000646896.1	1938	1	-68	2	-39	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	104	315	1236	1550	65.0	-2	True	AATAAA	-9
PB.12195.2	chrX	+	1053	3	full-splice_match	TCEAL9	ENST00000372661.5	1033	3	-29	9	-17	-2	multi-exon	FALSE	canonical	1	1075786	junction_2	56217.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	285	599	65.0	-34	True	AATAAA	-9
PB.901.1	chr1	-	2267	8	full-splice_match	TADA1	ENST00000367874.4	2159	8	-112	4	-112	-4	multi-exon	FALSE	canonical	1	90944	junction_3	34274.59655160816	NA	4	NA	TRUE	NA	NA	NA	A	coding	335	1008	207	1214	35.0	-153	False	AATAAA	-12
PB.7428.1	chr20	-	4228	17	full-splice_match	ZNF512B	ENST00000369888.5	5919	17	12	1679	12	-1679	multi-exon	TRUE	canonical	1	22157	junction_16	67885.31399168748	NA	1	1	TRUE	NA	NA	NA	A	coding	892	2679	43	2721	40.0	9788	False	TTTAAA	-14
PB.7569.8	chr21	-	2140	5	novel_not_in_catalog	SLC19A1	novel	3572	5	NA	NA	34	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78729.52894721269	NA	3	1	TRUE	NA	NA	NA	C	coding	386	1161	478	1638	10.0	2	True	ATTAAA	-12
PB.7569.9	chr21	-	2411	6	full-splice_match	SLC19A1	ENST00000311124.8	3811	6	42	1358	42	384	multi-exon	FALSE	canonical	1	50343	junction_4	67930.02084910618	NA	2	NA	TRUE	NA	NA	NA	C	coding	591	1776	112	1887	15.0	10	True	AATGAA	-14
PB.4957.10	chr17	-	3633	26	novel_in_catalog	MED24	novel	3896	25	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	17257	junction_25	197295.77716252924	NA	0	NA	TRUE	NA	NA	NA	C	coding	1014	3045	163	3207	5.0	-20	False	AATAAA	-18
PB.4957.11	chr17	-	3591	27	novel_not_in_catalog	MED24	novel	3896	25	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	4898	junction_3	231201.5836407189	NA	2	NA	TRUE	NA	NA	NA	C	coding	879	2640	108	2747	5.0	-1	True	AATAAA	-17
PB.7569.6	chr21	-	2980	6	novel_not_in_catalog	SLC19A1	novel	3572	5	NA	NA	21	0	intron_retention	FALSE	canonical	1	4192	junction_5	92164.30214654696	NA	2	NA	TRUE	NA	NA	NA	C	coding	591	1776	262	2037	10.0	-1	True	ATTAAA	-15
PB.10850.1	chr7	+	3315	1	incomplete-splice_match	MKLN1	ENST00000352689.10	11156	18	165456	6	14845	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-18
PB.7569.1	chr21	-	4984	6	full-splice_match	SLC19A1	ENST00000311124.8	3811	6	27	-1200	27	-214	multi-exon	FALSE	canonical	1	50343	junction_4	67930.02084910618	NA	6	NA	TRUE	NA	NA	NA	C	coding	591	1776	127	1902	45.0	-5	True	TTTAAA	-6
PB.7569.2	chr21	-	3805	6	full-splice_match	SLC19A1	ENST00000311124.8	3811	6	7	-1	7	1	multi-exon	FALSE	canonical	1	50343	junction_4	67930.02084910618	NA	6	NA	TRUE	NA	NA	NA	C	coding	591	1776	147	1922	15.0	1946	False	GATAAA	-18
PB.7569.3	chr21	-	2903	6	novel_not_in_catalog	SLC19A1	novel	3572	5	NA	NA	81	4	intron_retention	FALSE	canonical	1	5236	junction_5	91863.64812829936	NA	2	NA	TRUE	NA	NA	NA	C	coding	591	1776	181	1956	15.0	2020	False	ATTAAA	-19
PB.5868.6	chr19	-	2950	4	full-splice_match	ZNF506	ENST00000540806.6	1424	4	-54	-1472	3	1472	multi-exon	FALSE	canonical	1	59684	junction_1	29018.10654669866	NA	3	NA	TRUE	NA	NA	NA	C	coding	444	1335	144	1478	15.0	0	True	AATACA	-14
PB.8116.6	chr3	+	4269	3	full-splice_match	DAG1	ENST00000308775.6	5522	3	135	1118	-10	-1118	multi-exon	FALSE	canonical	1	147234	junction_1	181713.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	290	2971	55.0	-22	True	ACTAAA	-17
PB.4425.1	chr16	-	2770	4	novel_not_in_catalog	AC007728.2	novel	2296	6	NA	NA	70	1390	any annotated donor/acceptor	FALSE	canonical	1	4099	junction_2	3171.658066199585	NA	3	NA	TRUE	NA	NA	NA	A	coding	110	333	1700	2032	25.0	1	True	AATAAA	-3
PB.3856.7	chr15	-	6584	18	full-splice_match	SECISBP2L	ENST00000559471.5	7176	18	88	504	-28	-372	multi-exon	FALSE	canonical	1	167440	junction_17	47129.066508602926	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	177	3482	65.0	-30	True	TATAAA	-35
PB.3856.6	chr15	-	6973	18	full-splice_match	SECISBP2L	ENST00000559471.5	7176	18	59	144	-57	-12	multi-exon	FALSE	canonical	1	167440	junction_17	47129.066508602926	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	206	3511	40.0	261	False	AATAAA	-21
PB.8825.6	chr4	+	3447	4	novel_in_catalog	THAP6	novel	313	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	8563	junction_1	38457.788290828976	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	92	637	20.0	0	True	AATAAA	-15
PB.5868.5	chr19	-	3116	4	full-splice_match	ZNF506	ENST00000540806.6	1424	4	-71	-1621	-12	1621	multi-exon	FALSE	canonical	1	59684	junction_1	29018.10654669866	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	161	1495	45.0	20	False	ATTAAA	-17
PB.3856.2	chr15	-	6952	17	full-splice_match	SECISBP2L	ENST00000261847.7	6779	17	-44	-129	-30	-3	multi-exon	FALSE	canonical	1	60667	junction_10	63587.3723293391	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	179	3349	35.0	-32	True	AATAAA	-16
PB.3856.1	chr15	-	7087	18	full-splice_match	SECISBP2L	ENST00000559471.5	7176	18	86	3	-30	-3	multi-exon	FALSE	canonical	1	167440	junction_17	47129.066508602926	NA	1	NA	TRUE	NA	NA	NA	C	coding	1101	3306	179	3484	35.0	-32	True	AATAAA	-16
PB.7459.5	chr21	-	2891	2	incomplete-splice_match	SAMSN1	ENST00000400566.5	1888	8	12	33230	10	2715	3prime_fragment	FALSE	canonical	1	318042	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-17	True	AATATA	-37
PB.202.2	chr1	+	2542	6	incomplete-splice_match	ZDHHC18	ENST00000374141.6	1002	8	16603	-1750	-1755	1750	5prime_fragment	FALSE	canonical	1	308466	junction_4	56796.6397562391	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	67	672	15.0	-4177	False	AATAAA	-13
PB.8361.3	chr3	-	3489	14	full-splice_match	SLC12A8	ENST00000469902.5	2989	14	18	-518	18	-1	multi-exon	FALSE	canonical	1	11579	junction_13	39542.248206280594	NA	4	NA	TRUE	NA	NA	NA	C	coding	714	2145	94	2238	25.0	NA	False	ATTAAA	-19
PB.8825.8	chr4	+	2036	5	full-splice_match	THAP6	ENST00000514480.1	1161	5	-16	-859	15	859	multi-exon	FALSE	canonical	1	8265	junction_1	40129.66153218215	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	509	1177	80.0	31	False	NA	NA
PB.8825.9	chr4	+	3744	5	full-splice_match	THAP6	ENST00000514480.1	1161	5	226	-2809	226	-3	multi-exon	FALSE	canonical	1	8265	junction_1	40129.66153218215	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	267	935	20.0	273	False	AATAAA	-14
PB.3856.9	chr15	-	2649	16	incomplete-splice_match	SECISBP2L	ENST00000261847.7	6779	17	-44	7614	-30	0	3prime_fragment	FALSE	canonical	1	60667	junction_9	64913.846715439344	NA	1	NA	TRUE	NA	NA	NA	C	coding	823	2469	179	2647	55.0	-32	True	NA	NA
PB.3856.8	chr15	-	2763	17	incomplete-splice_match	SECISBP2L	ENST00000559471.5	7176	18	107	7746	-9	0	3prime_fragment	FALSE	canonical	1	167440	junction_16	47856.154080483735	NA	4	NA	TRUE	NA	NA	NA	C	coding	868	2604	158	2761	55.0	-11	True	NA	NA
PB.502.3	chr1	-	4369	13	novel_not_in_catalog	SSX2IP	novel	5843	13	NA	NA	7	-1247	any annotated donor/acceptor	FALSE	canonical	1	18548	junction_12	82631.61400708972	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	130	1890	55.0	-1	True	ATTAAA	-18
PB.9734.1	chr6	+	962	6	full-splice_match	TMEM14B	ENST00000379542.9	975	6	12	1	-2	-1	multi-exon	FALSE	canonical	1	16450	junction_2	130833.06260819548	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	156	500	15.0	-84	False	AATAAA	-17
PB.9381.21	chr5	-	2528	10	full-splice_match	PJA2	ENST00000361189.6	4889	10	29	2332	29	-2328	multi-exon	FALSE	canonical	1	437772	junction_9	178227.70248411282	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	212	2338	30.0	8	True	ATTAAA	-14
PB.9381.20	chr5	-	2641	10	full-splice_match	PJA2	ENST00000361189.6	4889	10	24	2224	24	-2220	multi-exon	FALSE	canonical	1	437772	junction_9	178227.70248411282	NA	7	NA	TRUE	NA	NA	NA	C	coding	708	2127	217	2343	10.0	3	True	AATAAA	-18
PB.4439.3	chr16	+	2296	13	full-splice_match	OGFOD1	ENST00000566157.5	4647	13	47	2304	-3	-333	multi-exon	FALSE	canonical	1	217635	junction_4	96995.48280375398	NA	38	3	TRUE	NA	NA	NA	C	coding	542	1629	77	1705	15.0	-19	True	NA	NA
PB.4439.2	chr16	+	2646	13	full-splice_match	OGFOD1	ENST00000566157.5	4647	13	31	1970	0	1	multi-exon	FALSE	canonical	1	217635	junction_4	96995.48280375398	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	93	1721	90.0	-35	True	NA	NA
PB.4439.1	chr16	+	2096	13	full-splice_match	OGFOD1	ENST00000566157.5	4647	13	12	2539	12	226	multi-exon	TRUE	canonical	1	217635	junction_4	96995.48280375398	NA	3	NA	TRUE	NA	NA	NA	C	coding	542	1629	112	1740	30.0	-98	False	NA	NA
PB.4439.7	chr16	+	2451	13	full-splice_match	OGFOD1	ENST00000566157.5	4647	13	63	2133	-3	-162	multi-exon	FALSE	canonical	1	217635	junction_4	96995.48280375398	NA	2	NA	TRUE	NA	NA	NA	C	coding	542	1629	61	1689	55.0	-3	True	NA	NA
PB.4439.6	chr16	+	1929	13	full-splice_match	OGFOD1	ENST00000566157.5	4647	13	51	2667	1	98	multi-exon	FALSE	canonical	1	217635	junction_4	96995.48280375398	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	73	1701	25.0	-15	True	ATTAAA	-27
PB.4439.5	chr16	+	2849	13	full-splice_match	OGFOD1	ENST00000566157.5	4647	13	192	1606	120	365	multi-exon	FALSE	canonical	1	217635	junction_4	96995.48280375398	NA	8	1	TRUE	NA	NA	NA	C	coding	487	1464	97	1560	5.0	82	False	ATTAAA	-14
PB.4439.4	chr16	+	2355	13	novel_not_in_catalog	OGFOD1	novel	4647	13	NA	NA	0	-332	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	178488.66780981034	NA	6	2	TRUE	NA	NA	NA	C	coding	560	1683	81	1763	15.0	-23	True	NA	NA
PB.10098.1	chr6	-	1740	5	full-splice_match	AKIRIN2	ENST00000257787.5	1662	5	66	-144	66	144	multi-exon	FALSE	canonical	1	361628	junction_4	225906.36138176807	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	460	1071	15.0	89	False	AATAAA	-12
PB.12181.2	chrX	-	3102	13	full-splice_match	TRMT2B	ENST00000545398.5	3106	13	4	0	4	0	multi-exon	FALSE	canonical	1	47822	junction_12	67383.64831131553	NA	4	NA	TRUE	NA	NA	NA	C	coding	504	1515	353	1867	30.0	-2	True	AATAAA	-23
PB.12181.1	chrX	-	3066	13	novel_in_catalog	TRMT2B	novel	3106	13	NA	NA	10	3	no_combination_of_known_junctions	FALSE	canonical	1	20763	junction_12	71604.953767762	NA	3	NA	TRUE	NA	NA	NA	C	coding	504	1515	314	1828	30.0	4	True	AATAAA	-26
PB.7495.16	chr21	+	2893	9	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	-28	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	153325.82258624933	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	1121	1774	20.0	-7	True	AAAAAG	-26
PB.7495.17	chr21	+	3042	10	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	-24	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	134656.76042937217	NA	2	NA	TRUE	NA	NA	NA	C	coding	515	1548	354	1901	20.0	-3	True	AAAAAG	-26
PB.7495.14	chr21	+	1905	9	incomplete-splice_match	AP000295.1	ENST00000646150.1	3770	15	30	33626	30	-19678	3prime_fragment	FALSE	canonical	1	112663	junction_1	96958.5112689153	NA	0	NA	TRUE	NA	NA	NA	B	coding	515	1548	324	1871	15.0	-19	True	AATGAA	-15
PB.1666.1	chr10	+	5101	7	novel_in_catalog	TRUB1	novel	3408	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	181056	junction_4	35933.57575057376	NA	3	NA	TRUE	NA	NA	NA	C	coding	199	600	62	661	30.0	-19	True	AATAAA	-19
PB.7495.12	chr21	+	2874	9	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	26	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	145664.38559150277	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	1091	1744	20.0	-23	True	AAAAAG	-26
PB.7495.13	chr21	+	4046	9	incomplete-splice_match	AP000295.1	ENST00000646150.1	3770	15	30	31485	30	-17537	3prime_fragment	FALSE	canonical	1	112663	junction_1	96958.5112689153	NA	12	NA	TRUE	NA	NA	NA	B	coding	515	1548	324	1871	10.0	-19	True	AATACA	-14
PB.7495.10	chr21	+	3615	1	novel_in_catalog	IFNAR2	novel	1389	9	NA	NA	18	-13320	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-31	True	NA	NA
PB.7495.11	chr21	+	1933	2	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	23	-6039	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-26	True	NA	NA
PB.6176.5	chr19	-	2587	5	full-splice_match	ZNF432	ENST00000221315.9	2577	5	-16	6	-16	-6	multi-exon	FALSE	canonical	1	38927	junction_4	28142.692109808897	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	335	2293	40.0	-1	True	ATTAAA	-20
PB.6176.4	chr19	-	2892	5	full-splice_match	ZNF432	ENST00000221315.9	2577	5	-16	-299	-16	299	multi-exon	FALSE	canonical	1	38927	junction_4	28142.692109808897	NA	1	NA	TRUE	NA	NA	NA	C	coding	652	1959	335	2293	45.0	-1	True	AATAAA	-33
PB.6176.3	chr19	-	3370	6	novel_not_in_catalog	ZNF432	novel	4513	5	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	39100.90945949979	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	277	2235	30.0	57	False	NA	NA
PB.6176.2	chr19	-	3548	6	novel_not_in_catalog	ZNF432	novel	4513	5	NA	NA	-19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45759.81449700162	NA	2	NA	TRUE	NA	NA	NA	C	coding	652	1959	233	2191	30.0	255	False	NA	NA
PB.6176.1	chr19	-	3650	6	novel_not_in_catalog	ZNF432	novel	4513	5	NA	NA	-16	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	39100.90945949979	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	335	2293	30.0	-1	True	NA	NA
PB.6710.11	chr2	+	3467	3	full-splice_match	INSIG2	ENST00000479999.1	532	3	-1381	-1554	-1381	1	multi-exon	FALSE	canonical	1	369100	junction_2	18589.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	8745	False	ATTAAA	-14
PB.6710.10	chr2	+	3632	6	novel_in_catalog	INSIG2	novel	574	5	NA	NA	-26	-2	intron_retention	FALSE	canonical	1	6574	junction_1	142760.3490819492	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	282	959	20.0	-8009	False	AATAAA	-15
PB.7225.9	chr20	+	1773	13	full-splice_match	HM13	ENST00000335574.9	1809	13	25	11	-2	-11	multi-exon	FALSE	canonical	1	86891	junction_12	728551.0120711064	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	100	1284	15.0	11	True	ATTAAA	-31
PB.7225.8	chr20	+	4096	7	novel_in_catalog	HM13	novel	3810	13	NA	NA	-3	-1530	combination_of_known_junctions	FALSE	canonical	1	8366	junction_3	688308.2011564458	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	571	930	95.0	10	True	NA	NA
PB.7225.3	chr20	+	2497	12	full-splice_match	HM13	ENST00000340852.9	1606	12	9	-900	-5	900	multi-exon	FALSE	canonical	1	1224215	junction_1	390696.34068702435	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	116	1249	10.0	-5	True	NA	NA
PB.7225.2	chr20	+	1535	11	novel_in_catalog	HM13	novel	3810	13	NA	NA	-5	-10	combination_of_known_junctions	TRUE	canonical	1	64466	junction_7	632343.5431297136	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	148	1197	15.0	-37	False	ATTAAA	-32
PB.7225.1	chr20	+	2239	11	novel_in_catalog	HM13	novel	3810	13	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1224215	junction_1	394653.13258689584	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	52	807	10.0	59	True	ATTAAA	-17
PB.7225.7	chr20	+	1845	3	full-splice_match	HM13	ENST00000498035.5	3932	3	-15	2102	0	-2102	multi-exon	FALSE	canonical	1	1224215	junction_1	27179.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	111	542	70.0	0	True	NA	NA
PB.7225.6	chr20	+	2348	14	novel_in_catalog	HM13	novel	3810	13	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	2083	junction_4	888512.3316384515	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	111	683	30.0	0	True	ATTAAA	-40
PB.7225.5	chr20	+	3193	3	full-splice_match	HM13	ENST00000498035.5	3932	3	-15	754	0	-754	multi-exon	FALSE	canonical	1	1224215	junction_1	27179.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	111	542	90.0	0	True	NA	NA
PB.7225.4	chr20	+	3699	3	full-splice_match	HM13	ENST00000498035.5	3932	3	-18	251	-3	-251	multi-exon	FALSE	canonical	1	1224215	junction_1	27179.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	114	545	90.0	-3	True	NA	NA
PB.3868.1	chr15	+	2981	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	-13	6223	-13	14	multi-exon	TRUE	canonical	1	71000	junction_1	21179.19300273062	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	235	1290	10.0	-119	False	AGTAAA	-18
PB.3868.2	chr15	+	8743	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	-6	454	-6	-454	multi-exon	FALSE	canonical	1	71000	junction_1	21179.19300273062	NA	3	NA	TRUE	NA	NA	NA	C	coding	351	1056	228	1283	40.0	-112	False	AATAAA	-25
PB.3868.3	chr15	+	9194	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	-5	2	-5	-2	multi-exon	FALSE	canonical	1	71000	junction_1	21179.19300273062	NA	5	NA	TRUE	NA	NA	NA	C	coding	351	1056	227	1282	25.0	-111	False	AATAAA	-23
PB.3868.4	chr15	+	3796	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	1	5394	1	682	multi-exon	FALSE	canonical	1	71000	junction_1	21179.19300273062	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	221	1276	40.0	-105	False	ATTAAA	-22
PB.3868.5	chr15	+	2940	7	incomplete-splice_match	TMOD2	ENST00000249700.8	9191	10	2	31551	2	-163	3prime_fragment	FALSE	canonical	1	71000	junction_1	24651.54435606193	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	220	981	40.0	-104	False	AATAAA	-6
PB.1882.8	chr11	+	7300	15	novel_in_catalog	HIPK3	novel	3668	16	NA	NA	-255	0	no_combination_of_known_junctions	FALSE	canonical	1	6382	junction_11	131483.3648373785	NA	1	NA	TRUE	NA	NA	NA	C	coding	1095	3288	561	3848	25.0	-64	True	ATTAAA	-17
PB.1882.9	chr11	+	4212	16	full-splice_match	HIPK3	ENST00000379016.7	7345	16	-253	3386	-253	69	multi-exon	FALSE	canonical	1	180973	junction_1	98457.00855757638	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	559	4143	45.0	-62	True	AATAAA	-18
PB.3868.8	chr15	+	2095	10	full-splice_match	TMOD2	ENST00000249700.8	9191	10	37	7059	1	428	multi-exon	FALSE	canonical	1	71000	junction_1	21179.19300273062	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	185	1240	25.0	1	True	AATAAA	-18
PB.1882.7	chr11	+	6564	16	novel_in_catalog	HIPK3	novel	3668	16	NA	NA	-258	0	no_combination_of_known_junctions	FALSE	canonical	1	7025	junction_1	144405.78197011366	NA	3	NA	TRUE	NA	NA	NA	C	coding	834	2505	608	3112	25.0	-67	True	ATTAAA	-17
PB.1882.4	chr11	+	5964	16	full-splice_match	HIPK3	ENST00000379016.7	7345	16	-276	1657	-276	-1654	multi-exon	FALSE	canonical	1	180973	junction_1	98457.00855757638	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3585	582	4166	25.0	-85	True	ATTAAA	-15
PB.1882.5	chr11	+	7492	15	novel_in_catalog	HIPK3	novel	3668	16	NA	NA	-270	0	no_combination_of_known_junctions	FALSE	canonical	1	5019	junction_3	133747.9788913287	NA	44	NA	TRUE	NA	NA	NA	C	coding	1154	3465	576	4040	25.0	-79	True	ATTAAA	-17
PB.1882.2	chr11	+	7623	17	full-splice_match	HIPK3	ENST00000303296.8	7408	17	-221	6	-221	-3	multi-exon	FALSE	canonical	1	106765	junction_12	122236.05574742462	NA	26	1	TRUE	NA	NA	NA	C	coding	1215	3648	527	4174	30.0	-30	True	ATTAAA	-14
PB.1882.3	chr11	+	5257	16	full-splice_match	HIPK3	ENST00000379016.7	7345	16	-293	2381	-293	1074	multi-exon	FALSE	canonical	1	180973	junction_1	98457.00855757638	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3585	599	4183	40.0	-102	True	AATAAA	-24
PB.9599.5	chr5	-	3464	4	novel_not_in_catalog	PWWP2A	novel	767	6	NA	NA	-55	-55	any annotated donor/acceptor	FALSE	canonical	1	2883	junction_2	4522.599866841589	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	860	2476	90.0	-29	False	NA	NA
PB.1882.1	chr11	+	2620	3	incomplete-splice_match	HIPK3	ENST00000303296.8	7408	17	-305	27601	-305	-9420	3prime_fragment	FALSE	canonical	1	180973	junction_1	33086.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	611	1879	75.0	-114	True	NA	NA
PB.5321.5	chr17	-	3526	11	novel_not_in_catalog	NPLOC4	novel	4415	17	NA	NA	10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	215942.61990908603	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	389	1156	10.0	11	True	AATAAA	-13
PB.5321.7	chr17	-	2238	1	incomplete-splice_match	NPLOC4	ENST00000331134.10	4415	17	78019	3	1762	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	13	42	270	311	10.0	7470	False	AATAAA	-12
PB.5321.2	chr17	-	4209	17	full-splice_match	NPLOC4	ENST00000331134.10	4415	17	205	1	119	-1	multi-exon	FALSE	canonical	1	247632	junction_16	133739.51759272048	NA	2	1	TRUE	NA	NA	NA	C	coding	608	1827	12	1838	5.0	170	False	AATAAA	-14
PB.11925.2	chr9	+	2314	13	full-splice_match	NELFB	ENST00000343053.4	2698	13	377	7	184	-7	multi-exon	FALSE	canonical	1	659905	junction_12	109170.50011602647	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	276	1703	30.0	223	False	AATAAA	-13
PB.11547.2	chr9	-	4844	12	novel_in_catalog	FBXO10	novel	4575	11	NA	NA	-16262	-10	no_combination_of_known_junctions	FALSE	canonical	1	9197	junction_10	449535.4741665543	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	329	3199	45.0	-15	True	AATAAA	-13
PB.10777.8	chr7	+	5667	6	novel_in_catalog	DUS4L	novel	491	3	NA	NA	-8	18	intron_retention	FALSE	canonical	1	16840	junction_1	32210.169176829855	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	4516	5061	40.0	-16	True	AATAAA	-16
PB.4061.1	chr15	+	1635	4	full-splice_match	ISG20	ENST00000306072.9	1856	4	198	23	0	-23	multi-exon	FALSE	canonical	1	483973	junction_1	91153.40673953015	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	161	706	55.0	10	True	NA	NA
PB.4061.2	chr15	+	1687	4	novel_in_catalog	ISG20	novel	800	4	NA	NA	-26	3	combination_of_known_junctions	FALSE	canonical	1	26960	junction_1	280155.39861417393	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	187	732	25.0	-1	True	AATAAA	-20
PB.4061.3	chr15	+	2674	4	novel_not_in_catalog	ISG20	novel	800	4	NA	NA	28	0	intron_retention	FALSE	non_canonical	0	0	junction_1	240533.47599450685	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	2044	2556	15.0	-8760	False	AGTAAA	-25
PB.502.4	chr1	-	4524	14	novel_not_in_catalog	SSX2IP	novel	5843	13	NA	NA	-35	-1266	any annotated donor/acceptor	FALSE	canonical	1	45395	junction_13	76988.92253500233	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	223	2064	20.0	241	False	CATAAA	-43
PB.4467.49	chr16	-	7737	50	novel_not_in_catalog	CNOT1	novel	8471	49	NA	NA	2	-6	any annotated donor/acceptor	FALSE	canonical	1	389	junction_33	316274.2351513382	NA	5	2	TRUE	NA	NA	NA	C	coding	1691	5076	2416	7491	55.0	-5	True	NA	NA
PB.4467.47	chr16	-	7785	50	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	31	junction_48	300635.0397898219	NA	0	NA	TRUE	NA	NA	NA	C	coding	2376	7131	405	7535	45.0	-10	True	NA	NA
PB.10777.1	chr7	+	1688	8	full-splice_match	DUS4L	ENST00000265720.7	2220	8	-13	545	-13	10	multi-exon	FALSE	canonical	1	32843	junction_1	32180.07718056218	NA	5	NA	TRUE	NA	NA	NA	C	coding	297	894	436	1329	40.0	-43	True	AATAAA	-12
PB.10777.2	chr7	+	2912	14	novel_in_catalog	DUS4L	novel	491	3	NA	NA	-3	40962	no_combination_of_known_junctions	FALSE	canonical	1	8379	junction_7	240087.60167365635	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	404	1849	80.0	-33	True	NA	NA
PB.10777.3	chr7	+	2063	7	novel_in_catalog	DUS4L	novel	491	3	NA	NA	-3	-42	combination_of_known_junctions	FALSE	canonical	1	20074	junction_4	43833.1345271157	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	611	1201	25.0	-33	True	AATAAA	-19
PB.4467.43	chr16	-	7647	49	full-splice_match	CNOT1	ENST00000569240.5	7660	49	3	10	1	1	multi-exon	FALSE	canonical	1	222174	junction_30	277621.20931012766	NA	25	3	TRUE	NA	NA	NA	C	coding	2371	7116	279	7394	40.0	-6	True	AATACA	-3
PB.4467.42	chr16	-	7693	49	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	127808	junction_10	293606.15176263027	NA	0	NA	TRUE	NA	NA	NA	C	coding	2378	7137	304	7440	40.0	-31	False	AATACA	-3
PB.4467.41	chr16	-	7769	50	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	31	junction_48	308799.94989870506	NA	0	NA	TRUE	NA	NA	NA	C	coding	2371	7116	401	7516	40.0	-6	True	AATACA	-3
PB.10777.7	chr7	+	2039	7	novel_in_catalog	DUS4L	novel	491	3	NA	NA	-9	9	intron_retention	FALSE	canonical	1	82740	junction_4	21810.141180958304	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	788	1681	40.0	-17	True	AATAAA	-11
PB.7410.3	chr20	-	3058	5	full-splice_match	YTHDF1	ENST00000370339.7	3301	5	239	4	144	-4	multi-exon	FALSE	canonical	1	213328	junction_4	165343.63514719126	NA	2	NA	TRUE	NA	NA	NA	A	coding	559	1680	104	1783	25.0	249	False	AATAAA	-14
PB.2559.17	chr12	+	3352	2	incomplete-splice_match	ANO6	ENST00000441606.2	5955	20	130271	4	87405	-4	5prime_fragment	FALSE	canonical	1	365745	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	70	213	104	316	30.0	-6553	False	AATAAA	-16
PB.8038.13	chr3	+	3613	15	incomplete-splice_match	CTNNB1	ENST00000647390.1	2784	16	19	-543	0	0	intron_retention	FALSE	canonical	1	19514	junction_1	756140.3120590618	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	167	2512	10.0	0	True	ATTAAA	-15
PB.7573.5	chr21	-	4359	22	novel_not_in_catalog	LSS	novel	2995	23	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	1	18840	junction_10	144768.84395671036	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	26	1270	25.0	3	True	AATAAA	-21
PB.7573.4	chr21	-	4342	21	full-splice_match	LSS	ENST00000457828.6	4390	21	43	5	0	-4	multi-exon	FALSE	canonical	1	268510	junction_10	101822.8693993152	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	409	2367	25.0	-8	True	AATAAA	-21
PB.7573.7	chr21	-	4209	20	novel_in_catalog	LSS	novel	2995	23	NA	NA	48	-4	intron_retention	FALSE	canonical	1	29011	junction_4	149612.47625958978	NA	3	NA	TRUE	NA	NA	NA	C	coding	630	1893	342	2234	25.0	59	False	AATAAA	-21
PB.7573.6	chr21	-	4205	22	full-splice_match	LSS	ENST00000397728.7	4936	22	48	683	-2	-4	multi-exon	FALSE	canonical	1	268510	junction_10	111189.93418148716	NA	2	NA	TRUE	NA	NA	NA	C	coding	732	2199	32	2230	25.0	-3	True	AATAAA	-21
PB.7573.1	chr21	-	2616	23	novel_in_catalog	LSS	novel	2995	23	NA	NA	-1	-5	combination_of_known_junctions	TRUE	canonical	1	21310	junction_1	149026.76861074986	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	19	2217	40.0	10	True	ATTAAA	-12
PB.7573.3	chr21	-	4111	21	novel_in_catalog	LSS	novel	2995	23	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	12447	junction_16	156420.93186651843	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	653	2134	20.0	-4	True	AATAAA	-23
PB.31.1	chr1	-	3226	13	novel_not_in_catalog	GNB1	novel	3145	11	NA	NA	-2	-1	any annotated donor/acceptor	TRUE	canonical	1	128	junction_12	1504066.8528799675	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	428	1450	15.0	1350	False	AATAAA	-18
PB.852.54	chr1	-	3510	3	incomplete-splice_match	COPA	ENST00000541366.1	616	5	-16	3270	-2	2705	3prime_fragment	FALSE	canonical	1	839931	junction_2	200113.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-29	True	TATAAA	-9
PB.7573.8	chr21	-	4172	22	full-splice_match	LSS	ENST00000522411.5	2523	22	5	-1654	-2	-4	multi-exon	FALSE	canonical	1	36769	junction_18	149600.68600273796	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	32	2197	25.0	-3	True	AATAAA	-21
PB.11625.48	chr9	-	2549	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	16	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835621.6377704098	NA	2	1	TRUE	NA	NA	NA	B	coding	433	1302	185	1486	85.0	19	False	NA	NA
PB.8038.14	chr3	+	3487	17	full-splice_match	CTNNB1	ENST00000453024.6	3052	17	60	-495	0	-1	multi-exon	FALSE	canonical	1	28597	junction_2	984486.0862578867	NA	2	NA	TRUE	NA	NA	NA	C	coding	770	2313	380	2692	10.0	0	True	ATTAAA	-14
PB.6657.1	chr2	-	2637	7	full-splice_match	CHST10	ENST00000264249.7	2842	7	204	1	2	-1	multi-exon	FALSE	canonical	1	61925	junction_6	31267.439208650692	NA	0	NA	TRUE	NA	NA	NA	A	coding	356	1071	183	1253	15.0	215	False	AATAAA	-19
PB.5076.3	chr17	+	3670	7	full-splice_match	PNPO	ENST00000641323.1	3657	7	1	-14	1	-7	multi-exon	FALSE	canonical	1	13302	junction_1	117659.02044526332	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	606	1151	25.0	-76	True	AATAAA	-16
PB.5076.2	chr17	+	2134	6	full-splice_match	PNPO	ENST00000225573.5	2256	6	138	-16	-1	16	multi-exon	FALSE	canonical	1	8734	junction_4	122986.08638443619	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	65	628	15.0	5	True	ATTAAA	-29
PB.5076.1	chr17	+	2245	7	full-splice_match	PNPO	ENST00000583599.6	696	7	5	-1554	5	15	multi-exon	FALSE	canonical	1	6552	junction_1	120068.58495101411	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	195	740	15.0	-5930	False	ATTAAA	-28
PB.5076.7	chr17	+	2281	7	full-splice_match	PNPO	ENST00000642017.1	3465	7	164	1020	-19	16	multi-exon	FALSE	canonical	1	186441	junction_1	58961.772128689925	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	83	775	15.0	-13	True	ATTAAA	-29
PB.5076.6	chr17	+	3276	6	full-splice_match	PNPO	ENST00000225573.5	2256	6	15	-1035	-5	-1	multi-exon	FALSE	canonical	1	8734	junction_4	122986.08638443619	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	95	751	20.0	-43	True	AATAAA	-22
PB.5076.5	chr17	+	2487	6	full-splice_match	PNPO	ENST00000641285.1	488	6	-429	-1570	-7	2	multi-exon	FALSE	canonical	1	3163	junction_1	132650.59146132745	NA	4	NA	TRUE	NA	NA	NA	C	coding	166	501	495	995	25.0	-45	True	ATTAAA	-15
PB.5076.4	chr17	+	3290	7	full-splice_match	PNPO	ENST00000642017.1	3465	7	174	1	-9	-1	multi-exon	FALSE	canonical	1	186441	junction_1	58961.772128689925	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	73	765	20.0	-3	True	AATAAA	-22
PB.6241.2	chr19	+	3288	4	full-splice_match	ZNF548	ENST00000336128.11	2115	4	81	-1254	13	1254	multi-exon	FALSE	canonical	1	64854	junction_1	25077.477265466718	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	150	1760	35.0	-25	True	NA	NA
PB.6241.3	chr19	+	4545	4	full-splice_match	ZNF548	ENST00000336128.11	2115	4	-44	-2386	3	-443	multi-exon	FALSE	canonical	1	64854	junction_1	25077.477265466718	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	275	1885	20.0	-1	True	NA	NA
PB.6241.1	chr19	+	3033	4	full-splice_match	ZNF548	ENST00000336128.11	2115	4	61	-979	-7	979	multi-exon	FALSE	canonical	1	64854	junction_1	25077.477265466718	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	170	1780	15.0	-45	False	NA	NA
PB.6241.6	chr19	+	1899	4	full-splice_match	ZNF548	ENST00000336128.11	2115	4	-11	227	2	-227	multi-exon	FALSE	canonical	1	64854	junction_1	25077.477265466718	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	242	1852	40.0	32	True	NA	NA
PB.6241.7	chr19	+	4968	4	full-splice_match	ZNF548	ENST00000336128.11	2115	4	-22	-2831	0	2	multi-exon	FALSE	canonical	1	64854	junction_1	25077.477265466718	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	253	1863	15.0	21	True	ATTAAA	-17
PB.6241.4	chr19	+	3665	4	full-splice_match	ZNF548	ENST00000336128.11	2115	4	-43	-1507	4	-1322	multi-exon	FALSE	canonical	1	64854	junction_1	25077.477265466718	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	274	1884	30.0	0	True	NA	NA
PB.6241.5	chr19	+	6498	4	novel_in_catalog	AC003002.1	novel	456	4	NA	NA	26289	3086	intron_retention	FALSE	canonical	1	28117	junction_1	42249.953446391184	NA	10	NA	TRUE	NA	NA	NA	A	coding	536	1611	3107	4717	30.0	1	True	NA	NA
PB.10636.8	chr7	+	4575	4	full-splice_match	MAGI2-AS3	ENST00000422093.5	762	4	-2	-3811	-2	3741	multi-exon	FALSE	canonical	1	98248	junction_1	17439.11788671281	NA	5	NA	TRUE	NA	NA	NA	C	coding	105	318	3	320	35.0	37	True	AATAAA	-18
PB.10986.37	chr8	-	2130	12	novel_in_catalog	CTSB	novel	660	4	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	14814	junction_10	2295953.5104211005	NA	3	NA	TRUE	NA	NA	NA	C	coding	339	1020	301	1320	25.0	-27	False	AATAAA	-22
PB.10636.4	chr7	+	4877	4	full-splice_match	MAGI2-AS3	ENST00000422093.5	762	4	-129	-3986	-97	-3715	multi-exon	FALSE	canonical	1	98248	junction_1	17439.11788671281	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-202	False	AGTAAA	-16
PB.10636.5	chr7	+	4682	3	full-splice_match	MAGI2-AS3	ENST00000435749.5	672	3	-625	-3385	-31	3146	multi-exon	FALSE	canonical	1	108741	junction_2	15307.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-24	True	AATAAA	-12
PB.10636.6	chr7	+	3923	4	full-splice_match	MAGI2-AS3	ENST00000451809.5	707	4	57	-3273	30	3146	multi-exon	FALSE	canonical	1	18240	junction_1	51420.371257141094	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	1	300	55.0	2	True	AATAAA	-12
PB.10636.7	chr7	+	4784	1	novel_in_catalog	MAGI2-AS3	novel	712	4	NA	NA	11	-633	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	115	348	1	348	100.0	18	True	NA	NA
PB.10636.1	chr7	+	3918	4	full-splice_match	MAGI2-AS3	ENST00000422093.5	762	4	76	-3232	31	3162	multi-exon	FALSE	canonical	1	98248	junction_1	17439.11788671281	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	3	True	AATAAA	-28
PB.10636.2	chr7	+	3676	3	novel_in_catalog	MAGI2-AS3	novel	712	4	NA	NA	14	3149	combination_of_known_junctions	FALSE	canonical	1	1396	junction_1	53672.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-345	False	AATAAA	-15
PB.10636.3	chr7	+	3788	4	novel_in_catalog	MAGI2-AS3	novel	712	4	NA	NA	-5	3167	no_combination_of_known_junctions	FALSE	canonical	1	1492	junction_1	59109.85231470864	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-317	False	AATAAA	-33
PB.1108.1	chr1	-	4433	20	full-splice_match	INTS7	ENST00000366994.7	4417	20	-14	-2	-14	0	multi-exon	FALSE	canonical	1	166877	junction_11	33932.40523840239	NA	1	NA	TRUE	NA	NA	NA	C	coding	962	2889	120	3008	10.0	-12	True	AATAAA	-21
PB.1108.2	chr1	-	4269	19	novel_in_catalog	INTS7	novel	4447	21	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	1716	junction_3	60542.64551251722	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	93	2315	0.0	15	True	AATAAA	-17
PB.1108.5	chr1	-	3586	21	novel_not_in_catalog	INTS7	novel	4447	21	NA	NA	-3	5	any annotated donor/acceptor	FALSE	canonical	1	3900	junction_3	72494.16609250361	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	109	3105	30.0	-1	True	NA	NA
PB.1108.7	chr1	-	3402	20	full-splice_match	INTS7	ENST00000366992.7	3380	20	-22	0	0	0	multi-exon	FALSE	canonical	1	4522	junction_3	58491.85874917567	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	106	2934	40.0	2	True	NA	NA
PB.11827.6	chr9	+	2591	8	full-splice_match	SET	ENST00000409104.7	962	8	29	-1658	29	4	multi-exon	FALSE	canonical	1	6966	junction_1	515288.38290469017	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	57	863	10.0	-9648	False	AATAAA	-20
PB.7497.10	chr21	+	2762	11	full-splice_match	IFNAR1	ENST00000270139.7	6139	11	69	3308	0	-3308	multi-exon	FALSE	canonical	1	231590	junction_1	79756.91144120363	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	291	1757	40.0	0	True	ATTAAA	-26
PB.7497.11	chr21	+	2184	11	full-splice_match	IFNAR1	ENST00000270139.7	6139	11	131	3824	62	-3824	multi-exon	FALSE	canonical	1	231590	junction_1	79756.91144120363	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	229	1695	25.0	-19	False	NA	NA
PB.7497.12	chr21	+	2088	10	novel_in_catalog	IFNAR1	novel	250	2	NA	NA	3	-3824	no_combination_of_known_junctions	FALSE	canonical	1	8919	junction_3	148639.11783823394	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	424	1599	25.0	3	True	NA	NA
PB.10007.17	chr6	+	3605	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	37	452	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	259	2400	80.0	2	True	NA	NA
PB.10007.10	chr6	+	3807	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	35	926	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	261	2402	90.0	0	True	NA	NA
PB.10007.11	chr6	+	3516	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	35	619	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	261	2402	95.0	0	True	NA	NA
PB.10007.12	chr6	+	3206	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	35	3442	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	261	2402	20.0	0	True	AATAAA	-20
PB.10007.13	chr6	+	2984	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	35	3439	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	1	1	TRUE	NA	NA	NA	C	coding	713	2142	261	2402	10.0	0	True	AATAAA	-17
PB.6255.1	chr19	-	2429	4	full-splice_match	ZNF671	ENST00000317398.10	2431	4	1	1	1	-1	multi-exon	FALSE	canonical	1	35680	junction_3	23470.56432119934	NA	0	NA	TRUE	NA	NA	NA	A	coding	534	1605	96	1700	15.0	0	True	AATAAA	-21
PB.11614.1	chr9	+	3188	16	full-splice_match	CEP78	ENST00000424347.6	11198	16	3	8007	0	7	multi-exon	FALSE	canonical	1	89710	junction_1	36759.43836253336	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	287	2356	5.0	-16	True	AATGAA	-15
PB.10986.30	chr8	-	2205	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	139	1531	-1	-2	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	116	1135	5.0	-4	True	AAAACA	-12
PB.11702.2	chr9	+	6900	11	full-splice_match	FKTN	ENST00000602661.5	2576	11	-8	-4316	-8	-86	multi-exon	FALSE	canonical	1	14531	junction_1	25992.808189959007	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	225	1610	85.0	-10	True	NA	NA
PB.3111.1	chr13	+	2372	10	novel_in_catalog	EXOSC8	novel	745	7	NA	NA	3	-85	intron_retention	FALSE	canonical	1	346667	junction_1	194074.36013975242	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	2	True	AATAAA	-17
PB.2615.4	chr12	-	2779	12	full-splice_match	BIN2	ENST00000605039.5	2781	12	0	2	0	-2	multi-exon	FALSE	canonical	1	127625	junction_6	111437.93641505697	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	995	2320	15.0	-1	True	AATAAA	-14
PB.3111.3	chr13	+	2086	9	novel_in_catalog	EXOSC8	novel	745	7	NA	NA	1	-62	intron_retention	FALSE	canonical	1	4520	junction_1	333924.5941507369	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	NA	NA
PB.3111.2	chr13	+	2419	10	full-splice_match	EXOSC8	ENST00000490537.6	2423	10	1	3	1	-3	multi-exon	FALSE	canonical	1	47767	junction_4	300941.5778609398	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-21
PB.2615.1	chr12	-	2328	14	novel_not_in_catalog	BIN2	novel	2003	11	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	canonical	1	5806	junction_3	132992.13833992166	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	22	1665	15.0	2	True	AATAAA	-15
PB.3111.4	chr13	+	945	11	full-splice_match	EXOSC8	ENST00000389704.3	1198	11	249	4	3	-4	multi-exon	FALSE	canonical	1	346667	junction_1	185779.86723797602	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	17	847	30.0	2	True	AATAAA	-20
PB.2615.3	chr12	-	2129	12	novel_in_catalog	BIN2	novel	2003	11	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	10773	junction_2	127592.07069218942	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	53	1669	15.0	-1	True	AATAAA	-15
PB.2615.2	chr12	-	2187	13	full-splice_match	BIN2	ENST00000615107.4	2255	13	67	1	11	-1	multi-exon	FALSE	canonical	1	127625	junction_6	109336.50475592795	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	30	1727	15.0	-6	True	AATAAA	-15
PB.11226.45	chr8	-	1930	12	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-24	-2806	any annotated donor/acceptor	FALSE	canonical	1	12241	junction_11	159281.1875988784	NA	2	NA	TRUE	NA	NA	NA	C	coding	599	1797	132	1928	60.0	-27	True	CATAAA	-19
PB.11810.4	chr9	-	1649	7	novel_not_in_catalog	ST6GALNAC4	novel	1691	6	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	117769.25352770231	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	280	1188	10.0	11	True	NA	NA
PB.11226.46	chr8	-	1598	10	novel_in_catalog	NBN	novel	4666	16	NA	NA	-3	-10090	no_combination_of_known_junctions	FALSE	canonical	1	2530	junction_8	186150.40515489978	NA	1	1	TRUE	NA	NA	NA	C	coding	395	1185	412	1596	65.0	-2	True	AGTAAA	-27
PB.386.1	chr1	+	2482	18	novel_in_catalog	RAD54L	novel	718	7	NA	NA	6	9	combination_of_known_junctions	FALSE	canonical	1	11482	junction_1	56998.85449119094	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	579	2282	30.0	-171	False	AATAAA	-24
PB.11226.43	chr8	-	2164	13	incomplete-splice_match	NBN	ENST00000265433.7	4666	16	46	12819	-5	-2796	3prime_fragment	FALSE	canonical	1	198817	junction_11	130385.12841927074	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2055	110	2164	55.0	-4	True	CATAAA	-29
PB.11226.42	chr8	-	2377	15	novel_in_catalog	NBN	novel	4666	16	NA	NA	-24	-10	combination_of_known_junctions	FALSE	canonical	1	8367	junction_3	159632.24093862346	NA	1	1	TRUE	NA	NA	NA	C	coding	702	2109	129	2237	25.0	-23	False	AATAAA	-6
PB.10284.5	chr6	-	2933	2	novel_in_catalog	ZBTB2	novel	3090	3	NA	NA	-28	0	no_combination_of_known_junctions	FALSE	canonical	1	6921	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	222	1529	25.0	271	False	AATAAA	-17
PB.5040.8	chr17	-	2095	9	novel_in_catalog	GPATCH8	novel	8109	7	NA	NA	-4	1285	combination_of_known_junctions	FALSE	canonical	1	20104	junction_5	98958.12327625952	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1791	305	2095	75.0	-5	True	AAGAAA	-28
PB.5803.8	chr19	-	4034	17	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	85755	-38832	any annotated donor/acceptor	FALSE	canonical	1	3622	junction_3	114151.78735157235	NA	0	NA	TRUE	NA	NA	NA	B	coding	900	2703	72	2774	30.0	-22	True	AATAAA	-11
PB.8038.17	chr3	+	3027	13	full-splice_match	CTNNB1	ENST00000644138.1	2777	13	0	-250	0	10	multi-exon	FALSE	canonical	1	1458507	junction_1	504858.3674827567	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	215	2323	100.0	0	True	NA	NA
PB.5040.4	chr17	-	6689	8	full-splice_match	GPATCH8	ENST00000591680.5	4692	8	6	-2003	-4	-129	multi-exon	FALSE	canonical	1	94252	junction_6	60367.592151783574	NA	1	NA	TRUE	NA	NA	NA	C	coding	1502	4509	26	4534	80.0	-5	True	NA	NA
PB.5040.5	chr17	-	5573	8	full-splice_match	GPATCH8	ENST00000591680.5	4692	8	-13	-868	-8	26	multi-exon	FALSE	canonical	1	94252	junction_6	60367.592151783574	NA	0	NA	TRUE	NA	NA	NA	C	coding	1502	4509	45	4553	45.0	-24	True	AATAAA	-23
PB.5040.6	chr17	-	2177	8	full-splice_match	GPATCH8	ENST00000591680.5	4692	8	-5	2520	0	1401	multi-exon	FALSE	canonical	1	94252	junction_6	60367.592151783574	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2139	37	2175	65.0	-16	True	AAGAAA	-3
PB.5040.7	chr17	-	2061	8	full-splice_match	GPATCH8	ENST00000591680.5	4692	8	-5	2636	0	1285	multi-exon	FALSE	canonical	1	94252	junction_6	60367.592151783574	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2025	37	2061	75.0	-16	True	AAGAAA	-28
PB.5040.1	chr17	-	6826	8	full-splice_match	GPATCH8	ENST00000591680.5	4692	8	-2	-2132	0	0	multi-exon	TRUE	canonical	1	94252	junction_6	60367.592151783574	NA	0	NA	TRUE	NA	NA	NA	C	coding	1502	4509	34	4542	30.0	-13	True	AATAAA	-15
PB.386.5	chr1	+	3083	18	full-splice_match	RAD54L	ENST00000371975.8	3108	18	28	-3	-9	2	multi-exon	FALSE	canonical	1	93317	junction_5	46130.91099946042	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	647	2890	20.0	-3	True	AATAAA	-17
PB.386.4	chr1	+	3223	19	novel_not_in_catalog	RAD54L	novel	718	7	NA	NA	18	2	intron_retention	FALSE	canonical	1	1910	junction_11	79716.33187896728	NA	8	1	TRUE	NA	NA	NA	C	coding	316	951	2080	3030	20.0	-13	True	AATAAA	-17
PB.7391.3	chr20	+	3952	4	full-splice_match	FAM217B	ENST00000469084.5	880	4	-37	-3035	-17	-645	multi-exon	FALSE	canonical	1	7240	junction_3	66952.4427784379	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	332	1012	80.0	33	True	ATTAAA	-16
PB.7391.2	chr20	+	5104	4	full-splice_match	FAM217B	ENST00000360816.7	5036	4	-71	3	-71	-3	multi-exon	FALSE	canonical	1	69439	junction_1	41061.66441125131	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	371	1522	10.0	-21	True	ATTAAA	-20
PB.7391.1	chr20	+	3832	4	full-splice_match	FAM217B	ENST00000360816.7	5036	4	28	1176	8	-1176	multi-exon	FALSE	canonical	1	69439	junction_1	41061.66441125131	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	272	1423	90.0	78	True	NA	NA
PB.1132.4	chr1	-	5387	35	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	0	1060	any annotated donor/acceptor	FALSE	canonical	1	133931	junction_18	49345.423857869566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1393	4182	78	4259	95.0	77	False	NA	NA
PB.7391.4	chr20	+	4386	4	full-splice_match	FAM217B	ENST00000360816.7	5036	4	7	643	7	-643	multi-exon	FALSE	canonical	1	69439	junction_1	41061.66441125131	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	293	1444	90.0	57	True	ATTAAA	-18
PB.4009.1	chr15	-	2867	1	antisense	novelGene_IDH3A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	101	306	1554	1859	70.0	NA	False	NA	NA
PB.5351.3	chr17	-	2596	10	full-splice_match	WDR45B	ENST00000572583.5	2322	10	-276	2	-41	-2	multi-exon	FALSE	canonical	1	61449	junction_4	108606.65783675114	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	255	881	20.0	-151	False	AATAAA	-18
PB.10989.4	chr8	-	3271	13	novel_not_in_catalog	LONRF1	novel	3594	12	NA	NA	-45	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	65612.76483080907	NA	1	NA	TRUE	NA	NA	NA	B	coding	652	1959	116	2074	25.0	-31	True	AATAAA	-24
PB.6288.2	chr2	-	1668	9	full-splice_match	EIPR1	ENST00000382125.8	1766	9	52	46	0	-46	multi-exon	FALSE	canonical	1	298909	junction_5	65685.70693033226	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	142	1305	15.0	-13	True	AATAAA	-16
PB.937.1	chr1	+	5587	22	novel_not_in_catalog	SUCO	novel	5916	23	NA	NA	-45	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	73403.51261844097	NA	4	1	TRUE	NA	NA	NA	B	coding	802	2409	1607	4015	15.0	-4	True	AATAAA	-21
PB.3105.2	chr13	-	6146	7	full-splice_match	DCLK1	ENST00000379892.4	2101	7	-22	-4023	-22	0	multi-exon	FALSE	canonical	1	32017	junction_6	31102.920313050992	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	235	1326	15.0	1	True	AATAAA	-15
PB.3105.3	chr13	-	2874	7	full-splice_match	DCLK1	ENST00000379892.4	2101	7	-23	-750	-23	750	multi-exon	FALSE	canonical	1	32017	junction_6	31102.920313050992	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	236	1327	70.0	0	True	AATAAA	-12
PB.3105.1	chr13	-	5731	17	full-splice_match	DCLK1	ENST00000360631.7	8007	17	-107	2383	-107	-5	multi-exon	FALSE	canonical	1	32017	junction_16	31717.50858697517	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	320	2542	25.0	-1	True	AATAAA	-7
PB.12240.1	chrX	-	2382	11	full-splice_match	UPF3B	ENST00000276201.6	2378	11	-7	3	-7	1	multi-exon	FALSE	canonical	1	46572	junction_3	108365.14040506755	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	78	1529	30.0	-43	True	AATAAA	-21
PB.2769.42	chr12	-	1358	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-4112	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	301	798	15.0	-1	True	ATTAAA	-22
PB.12240.3	chrX	-	2338	10	full-splice_match	UPF3B	ENST00000345865.6	2335	10	-7	4	-7	-4	multi-exon	FALSE	canonical	1	225783	junction_5	54557.25824362628	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	78	1490	25.0	-43	True	AATAAA	-16
PB.1457.28	chr10	-	2567	15	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	76	-245	any annotated donor/acceptor	FALSE	canonical	1	15	junction_8	4110786.6839016327	NA	1	1	TRUE	NA	NA	NA	C	coding	237	714	861	1574	5.0	-1	True	AATAAA	-18
PB.2769.43	chr12	-	2033	1	novel_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-4116	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	260	783	278	1060	15.0	-1	True	ATTAAA	-18
PB.1457.23	chr10	-	2642	15	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	74	-244	any annotated donor/acceptor	FALSE	canonical	1	15	junction_8	4109308.681847379	NA	4	1	TRUE	NA	NA	NA	C	coding	261	786	863	1648	10.0	-3	True	AATAAA	-19
PB.1457.21	chr10	-	6360	13	novel_in_catalog	PSAP	novel	2872	14	NA	NA	46	-244	intron_retention	FALSE	canonical	1	4769161	junction_12	2095927.69750474	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	4716	5462	10.0	-1	True	AATAAA	-19
PB.3382.9	chr14	-	2196	15	incomplete-splice_match	BAZ1A	ENST00000358716.8	5920	26	308	30467	308	698	3prime_fragment	FALSE	canonical	1	67993	junction_3	117657.14336928901	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	261	2195	70.0	-1	True	AAGAAA	-13
PB.1457.25	chr10	-	2471	13	novel_in_catalog	PSAP	novel	2872	14	NA	NA	25	-244	no_combination_of_known_junctions	FALSE	canonical	1	35534	junction_2	3167081.1121603185	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	80	1573	10.0	-6	True	AATAAA	-19
PB.1457.24	chr10	-	2497	14	full-splice_match	PSAP	ENST00000394936.7	2872	14	126	249	76	-248	multi-exon	FALSE	canonical	1	4769161	junction_13	2170345.947971576	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	29	1603	5.0	-1	True	AATAAA	-15
PB.9191.5	chr5	-	7489	39	full-splice_match	RICTOR	ENST00000296782.9	7505	39	1	15	1	-15	multi-exon	FALSE	canonical	1	80657	junction_28	37646.687049587206	NA	2	NA	TRUE	NA	NA	NA	C	coding	1732	5199	22	5220	75.0	0	True	NA	NA
PB.3382.8	chr14	-	2291	16	incomplete-splice_match	BAZ1A	ENST00000360310.5	6010	27	309	30461	309	698	3prime_fragment	FALSE	canonical	1	169898	junction_15	98076.51410132126	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2031	260	2290	70.0	0	True	AAGAAA	-13
PB.6476.8	chr2	-	5313	15	full-splice_match	PPP4R3B	ENST00000611717.4	5243	15	-77	7	-77	-7	multi-exon	FALSE	canonical	1	34210	junction_5	133578.55020334877	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	407	2701	30.0	1159	False	AATAAA	-11
PB.6476.6	chr2	-	5397	16	full-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-8	-1079	-2	-7	multi-exon	FALSE	canonical	1	188789	junction_7	86824.2422797279	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	332	2785	30.0	-13	True	AATAAA	-11
PB.10696.14	chr7	+	1533	11	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	48798	45	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1321193.0013870834	NA	2	1	TRUE	NA	NA	NA	B	coding	372	1119	206	1324	70.0	0	True	NA	NA
PB.8919.10	chr4	-	5689	11	incomplete-splice_match	PAPSS1	ENST00000265174.4	2731	12	212	14073	-14	-14073	3prime_fragment	FALSE	canonical	1	405415	junction_10	122100.78220814148	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	62	1801	80.0	-7	True	NA	NA
PB.6476.5	chr2	-	5471	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_3	118462.84131585313	NA	3	NA	TRUE	NA	NA	NA	C	coding	842	2529	331	2859	30.0	-12	True	AATAAA	-11
PB.6476.2	chr2	-	4869	16	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-2	-7	no_combination_of_known_junctions	FALSE	canonical	1	41591	junction_13	137734.47898920104	NA	2	NA	TRUE	NA	NA	NA	C	coding	641	1926	332	2257	30.0	-13	True	AATAAA	-11
PB.6476.3	chr2	-	4778	15	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-7	-7	no_combination_of_known_junctions	FALSE	canonical	1	41591	junction_12	132023.0829489754	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	337	2166	30.0	-18	True	AATAAA	-11
PB.10696.15	chr7	+	1393	10	full-splice_match	ARPC1B	ENST00000646101.2	1511	10	0	118	0	-14	multi-exon	FALSE	canonical	1	2237353	junction_1	466487.11309150275	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	66	1184	70.0	0	True	NA	NA
PB.3555.5	chr14	-	2107	12	full-splice_match	ALDH6A1	ENST00000553458.5	5499	12	54	3338	8	59	multi-exon	FALSE	canonical	1	239134	junction_5	54364.65501143548	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	46	1653	75.0	-22	True	NA	NA
PB.3555.4	chr14	-	2380	13	novel_not_in_catalog	ALDH6A1	novel	5499	12	NA	NA	13	-823	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	99054.74688720821	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	41	1648	50.0	-17	True	NA	NA
PB.5516.14	chr18	-	4180	9	novel_in_catalog	CDH19	novel	6341	12	NA	NA	2	2175	combination_of_known_junctions	FALSE	canonical	1	1755	junction_1	4626.461978391263	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	296	1633	40.0	-4	True	NA	NA
PB.3555.6	chr14	-	1851	12	full-splice_match	ALDH6A1	ENST00000553458.5	5499	12	61	3587	-12	-22	multi-exon	FALSE	canonical	1	239134	junction_5	54364.65501143548	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	39	1646	25.0	-15	True	AATGAA	-25
PB.3555.1	chr14	-	4638	12	full-splice_match	ALDH6A1	ENST00000553458.5	5499	12	38	823	-6	-823	multi-exon	FALSE	canonical	1	239134	junction_5	54364.65501143548	NA	4	NA	TRUE	NA	NA	NA	C	coding	535	1608	62	1669	50.0	19	False	NA	NA
PB.2769.44	chr12	-	1465	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	6	4270	6	-4270	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	281	1063	35.0	-4	True	AAAAAG	-22
PB.3555.3	chr14	-	2433	13	novel_not_in_catalog	ALDH6A1	novel	5499	12	NA	NA	-12	-823	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	99054.74688720821	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	39	1646	50.0	-15	True	NA	NA
PB.3555.2	chr14	-	3146	13	novel_not_in_catalog	ALDH6A1	novel	5499	12	NA	NA	4	-823	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	99054.74688720821	NA	4	1	TRUE	NA	NA	NA	C	coding	535	1608	50	1657	50.0	-26	True	NA	NA
PB.10696.17	chr7	+	1673	12	novel_in_catalog	AC004922.1	novel	2430	17	NA	NA	48801	45	no_combination_of_known_junctions	FALSE	canonical	1	8860	junction_1	1470397.0218357146	NA	0	NA	TRUE	NA	NA	NA	B	coding	372	1119	346	1464	70.0	3	True	NA	NA
PB.10696.18	chr7	+	2082	10	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	48803	3471	any annotated donor/acceptor	FALSE	canonical	1	10952	junction_9	1086691.9592695353	NA	0	NA	TRUE	NA	NA	NA	B	coding	367	1104	95	1198	5.0	5	True	AATAAA	-37
PB.3185.10	chr13	-	4365	22	incomplete-splice_match	DIAPH3	ENST00000267215.8	3449	27	-193	85913	28	1282	3prime_fragment	FALSE	canonical	1	70644	junction_21	27866.22209414928	NA	2	NA	TRUE	NA	NA	NA	B	coding	954	2865	194	3058	35.0	-32	True	AATAAA	-17
PB.3185.11	chr13	-	2192	17	incomplete-splice_match	DIAPH3	ENST00000267215.8	3449	27	-195	195962	26	-108767	3prime_fragment	FALSE	canonical	1	70644	junction_16	30142.095772565317	NA	0	NA	TRUE	NA	NA	NA	B	coding	665	1995	196	2190	65.0	-34	True	NA	NA
PB.3185.12	chr13	-	2091	16	incomplete-splice_match	DIAPH3	ENST00000267215.8	3449	27	-184	196845	37	-109650	3prime_fragment	FALSE	canonical	1	70644	junction_15	31051.102609873433	NA	0	NA	TRUE	NA	NA	NA	B	coding	635	1905	185	2089	55.0	-23	True	NA	NA
PB.8461.44	chr3	-	1619	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-2	15	any annotated donor/acceptor	FALSE	canonical	1	12859	junction_6	185930.3763524281	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	207	1409	10.0	-3	True	AATAAA	-19
PB.8461.47	chr3	-	2388	3	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	0	3461	any annotated donor/acceptor	FALSE	canonical	1	214	junction_1	150340.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	159	480	265	744	45.0	-1	True	AATAAA	-20
PB.8461.46	chr3	-	2462	3	incomplete-splice_match	WWTR1	ENST00000360632.7	2103	7	74	50991	-2	1628	3prime_fragment	FALSE	canonical	1	300895	junction_2	38993.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	267	920	100.0	-3	True	NA	NA
PB.6644.4	chr2	-	2406	8	novel_in_catalog	ACTR1B	novel	2243	11	NA	NA	-94	-5	intron_retention	FALSE	canonical	1	12215	junction_6	308675.58079171414	NA	51	3	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-69	True	NA	NA
PB.8461.41	chr3	-	1884	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	74	145	-2	-145	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	267	1469	40.0	-3	True	NA	NA
PB.9305.7	chr5	-	2756	13	full-splice_match	WDR41	ENST00000296679.8	3958	13	338	864	29	447	multi-exon	FALSE	canonical	1	364587	junction_5	45793.24804571509	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	39	1418	30.0	-30	True	ATTAAA	-20
PB.1482.2	chr10	+	2928	16	full-splice_match	KAT6B	ENST00000648899.1	2847	16	-70	-11	4	11	multi-exon	FALSE	canonical	1	25525	junction_1	39922.23310164679	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2412	516	2927	70.0	9	True	NA	NA
PB.1482.3	chr10	+	3000	16	incomplete-splice_match	KAT6B	ENST00000648892.1	7625	18	114	10476	-25	11	3prime_fragment	FALSE	canonical	1	29312	junction_1	39378.185268608926	NA	4	NA	TRUE	NA	NA	NA	C	coding	804	2412	588	2999	70.0	-73	False	NA	NA
PB.8953.4	chr4	+	1851	11	full-splice_match	METTL14	ENST00000388822.9	6669	11	13	4805	13	27	multi-exon	FALSE	canonical	1	154952	junction_6	26431.47776875141	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	155	1525	35.0	-12	True	AATAAA	-6
PB.1482.1	chr10	+	3170	16	novel_in_catalog	KAT6B	novel	877	3	NA	NA	-4	11	combination_of_known_junctions	FALSE	canonical	1	2790	junction_1	43477.70385994796	NA	1	1	TRUE	NA	NA	NA	C	coding	804	2412	758	3169	70.0	-4	True	NA	NA
PB.1482.6	chr10	+	7468	18	full-splice_match	KAT6B	ENST00000372724.6	7571	18	116	-13	1	-1	multi-exon	FALSE	canonical	1	25711	junction_8	44799.14621174201	NA	1	NA	TRUE	NA	NA	NA	C	coding	1890	5673	550	6222	10.0	1	True	AATAAA	-19
PB.1482.7	chr10	+	3824	16	incomplete-splice_match	KAT6B	ENST00000287239.9	8348	18	15	10474	-1	11	3prime_fragment	FALSE	canonical	1	29312	junction_1	39258.22607267595	NA	0	NA	TRUE	NA	NA	NA	C	coding	1096	3288	536	3823	70.0	15	True	NA	NA
PB.1482.4	chr10	+	7141	18	full-splice_match	KAT6B	ENST00000648892.1	7625	18	151	333	0	-2	multi-exon	FALSE	canonical	1	29312	junction_1	43314.19250475646	NA	7	NA	TRUE	NA	NA	NA	C	coding	1781	5346	551	5896	10.0	0	True	AATAAA	-18
PB.1482.5	chr10	+	2796	16	incomplete-splice_match	KAT6B	ENST00000648892.1	7625	18	152	10642	1	-5	3prime_fragment	FALSE	canonical	1	29312	junction_1	39378.185268608926	NA	2	NA	TRUE	NA	NA	NA	C	coding	749	2247	550	2796	50.0	1	True	NA	NA
PB.10819.1	chr7	-	4565	2	full-splice_match	GCC1	ENST00000321407.2	4149	2	-13	-403	-13	403	multi-exon	FALSE	canonical	1	174775	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	439	2766	35.0	-25	True	AATAAA	-31
PB.1482.8	chr10	+	3109	16	incomplete-splice_match	KAT6B	ENST00000372724.6	7571	18	130	10297	-1	-5	3prime_fragment	FALSE	canonical	1	25711	junction_8	41050.698388970464	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2574	536	3109	50.0	15	True	NA	NA
PB.1482.9	chr10	+	3258	16	incomplete-splice_match	KAT6B	ENST00000372724.6	7571	18	147	10131	0	11	3prime_fragment	FALSE	canonical	1	25711	junction_8	41050.698388970464	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2739	519	3257	70.0	-4	True	NA	NA
PB.9536.10	chr5	-	4978	1	novel_in_catalog	SPRY4	novel	4938	3	NA	NA	1569	-2527	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2441	False	TTTAAA	-15
PB.9536.11	chr5	-	2957	1	novel_in_catalog	SPRY4	novel	4938	3	NA	NA	3587	-2530	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	4459	False	TTTAAA	-12
PB.6196.1	chr19	+	4012	4	full-splice_match	ZNF845	ENST00000458035.2	6351	4	-13	2352	-13	-315	multi-exon	FALSE	canonical	1	25641	junction_3	4817.095967027806	NA	0	NA	TRUE	NA	NA	NA	C	coding	970	2913	134	3046	35.0	-16	True	NA	NA
PB.7446.5	chr21	+	2190	3	full-splice_match	CU634019.1	ENST00000621909.4	859	3	-29	-1302	0	2	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	173	535	15.0	NA	False	NA	NA
PB.184.1	chr1	+	2489	11	full-splice_match	MACO1	ENST00000374343.4	3917	11	-46	1474	16	-495	multi-exon	FALSE	canonical	1	137083	junction_1	105292.84615604233	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	226	2220	20.0	-6449	False	ATTAAA	-25
PB.7446.1	chr21	+	2331	3	full-splice_match	CU633967.1	ENST00000619252.4	549	3	21	-1803	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	184	546	25.0	NA	False	NA	NA
PB.7446.2	chr21	+	3433	3	full-splice_match	CU633904.1	ENST00000625115.1	888	3	-100	-2445	1	487	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	TATAAA	-18
PB.7446.3	chr21	+	3333	1	novel_in_catalog	CU638689.5	novel	1032	3	NA	NA	1	-64	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	ATTAAA	-23
PB.8719.3	chr4	-	5148	11	full-splice_match	SEPSECS	ENST00000382103.6	5496	11	-39	387	-39	-387	multi-exon	FALSE	canonical	1	32773	junction_10	20562.996766278986	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	113	1618	10.0	-1	True	AGTAAA	-19
PB.8719.1	chr4	-	5535	11	full-splice_match	SEPSECS	ENST00000382103.6	5496	11	-34	-5	-34	5	multi-exon	FALSE	canonical	1	32773	junction_10	20562.996766278986	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	108	1613	30.0	4	True	AATAAA	-20
PB.8719.6	chr4	-	1905	11	full-splice_match	SEPSECS	ENST00000382103.6	5496	11	-7	3598	-7	238	multi-exon	FALSE	canonical	1	32773	junction_10	20562.996766278986	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	81	1586	25.0	123	False	AGTAAA	-20
PB.8719.7	chr4	-	2081	5	incomplete-splice_match	SEPSECS	ENST00000382103.6	5496	11	-7	33684	-7	5247	3prime_fragment	FALSE	canonical	1	32773	junction_4	30557.181974946576	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	81	785	5.0	123	False	ATTAAA	-13
PB.8719.4	chr4	-	4501	11	full-splice_match	SEPSECS	ENST00000382103.6	5496	11	-2	997	-2	-997	multi-exon	FALSE	canonical	1	32773	junction_10	20562.996766278986	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	76	1581	25.0	128	False	ATTAAA	-14
PB.8719.5	chr4	-	3413	11	full-splice_match	SEPSECS	ENST00000382103.6	5496	11	-3	2086	-3	155	multi-exon	FALSE	canonical	1	32773	junction_10	20562.996766278986	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	77	1582	35.0	127	False	AATAAA	-18
PB.5409.1	chr18	-	4108	4	novel_not_in_catalog	FAM210A	novel	4340	5	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	canonical	1	1421	junction_1	76760.30179432305	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	218	976	15.0	40	True	AATAAA	-19
PB.5409.3	chr18	-	4235	5	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	54	-4	combination_of_known_junctions	TRUE	canonical	1	10035	junction_4	97234.89093009515	NA	3	NA	TRUE	NA	NA	NA	C	coding	272	819	292	1110	35.0	-5	True	AATAAA	-12
PB.5409.2	chr18	-	4119	4	full-splice_match	FAM210A	ENST00000402563.5	4240	4	43	78	11	-78	multi-exon	FALSE	canonical	1	142639	junction_3	34414.386926916995	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	250	1068	65.0	8	True	NA	NA
PB.5409.5	chr18	-	3692	3	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	11	-4	no_combination_of_known_junctions	FALSE	canonical	1	2583	junction_2	112072.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	8	True	AATAAA	-12
PB.5409.4	chr18	-	4118	3	full-splice_match	FAM210A	ENST00000588475.1	1389	3	-81	-2648	0	-4	multi-exon	FALSE	canonical	1	21408	junction_1	60615.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	166	501	287	787	35.0	-29	True	AATAAA	-12
PB.5409.7	chr18	-	4104	4	full-splice_match	FAM210A	ENST00000402563.5	4240	4	-4	140	-4	-140	multi-exon	FALSE	canonical	1	142639	junction_3	34414.386926916995	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	297	1115	45.0	-39	True	NA	NA
PB.5409.9	chr18	-	3294	4	full-splice_match	FAM210A	ENST00000402563.5	4240	4	138	808	51	-808	multi-exon	FALSE	canonical	1	142639	junction_3	34414.386926916995	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	155	973	30.0	103	False	AGTAAA	-11
PB.5409.8	chr18	-	3552	5	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	-2	-798	combination_of_known_junctions	FALSE	canonical	1	10035	junction_4	97234.89093009515	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	403	1221	20.0	-5	True	AGTAAA	-21
PB.6762.2	chr2	+	1604	2	intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1324	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-17
PB.6762.1	chr2	+	3897	3	novel_not_in_catalog	AC016710.1	novel	466	2	NA	NA	-58824	17	any annotated donor/acceptor	FALSE	canonical	1	473	junction_2	733.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-508	False	NA	NA
PB.11211.6	chr8	-	2099	8	full-splice_match	ZFAND1	ENST00000220669.9	1798	8	0	-301	0	-88	multi-exon	FALSE	canonical	1	273320	junction_5	107647.09118718082	NA	4	1	TRUE	NA	NA	NA	C	coding	268	807	20	826	35.0	-1	True	NA	NA
PB.11034.3	chr8	+	1670	10	full-splice_match	CHMP7	ENST00000313219.8	3367	10	539	1158	-7	254	multi-exon	FALSE	canonical	1	166918	junction_1	126121.90604782265	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	67	1428	10.0	-11	True	NA	NA
PB.11211.4	chr8	-	2194	8	full-splice_match	ZFAND1	ENST00000220669.9	1798	8	-6	-390	-6	1	multi-exon	FALSE	canonical	1	273320	junction_5	107647.09118718082	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	26	832	40.0	-7	True	NA	NA
PB.11211.5	chr8	-	2166	7	full-splice_match	ZFAND1	ENST00000522520.5	1705	7	-11	-450	0	19	multi-exon	FALSE	canonical	1	196288	junction_5	121971.46562026528	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	301	786	30.0	-1	True	NA	NA
PB.11211.2	chr8	-	2313	7	full-splice_match	ZFAND1	ENST00000522520.5	1705	7	-23	-585	-12	154	multi-exon	FALSE	canonical	1	196288	junction_5	121971.46562026528	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	313	798	15.0	-13	True	NA	NA
PB.11211.3	chr8	-	2282	7	novel_in_catalog	ZFAND1	novel	2719	4	NA	NA	8	42	combination_of_known_junctions	FALSE	canonical	1	46615	junction_6	189859.98937082267	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	394	879	20.0	7	True	NA	NA
PB.8375.1	chr3	-	2277	1	incomplete-splice_match	MGLL	ENST00000265052.9	4642	8	131538	6	22802	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	169	510	247	756	15.0	-988	False	AATAAA	-15
PB.5803.1	chr19	-	4530	16	novel_in_catalog	AC008764.1	novel	2567	12	NA	NA	85750	-38822	intron_retention	FALSE	canonical	1	232277	junction_8	77333.68843901227	NA	1	NA	TRUE	NA	NA	NA	B	coding	821	2466	77	2542	20.0	-27	True	AATAAA	-21
PB.1195.1	chr1	+	3648	15	novel_in_catalog	GNPAT	novel	839	6	NA	NA	-24	-140	intron_retention	FALSE	canonical	1	306069	junction_2	117511.74045125302	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	197	2074	45.0	-168	False	AATAAA	-20
PB.10645.18	chr7	+	3766	17	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	38972	junction_9	125198.36189409526	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	1244	2572	30.0	0	True	AATAAA	-15
PB.6623.2	chr2	+	1287	8	full-splice_match	FAHD2A	ENST00000233379.8	4757	8	-20	3490	-15	30	multi-exon	FALSE	canonical	1	2468	junction_7	87363.30182633895	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	174	1118	10.0	-2	True	AATAAA	-16
PB.11211.8	chr8	-	1933	8	novel_in_catalog	ZFAND1	novel	2719	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	46615	junction_7	170500.42002533696	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	476	961	10.0	-35	True	AATAAA	-13
PB.6623.1	chr2	+	5118	6	novel_in_catalog	FAHD2A	novel	522	2	NA	NA	-25	34	intron_retention	FALSE	canonical	1	2468	junction_5	77240.10242976119	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	4337	4945	5.0	-12	True	AATAAA	-20
PB.11666.12	chr9	+	6541	20	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	9187	junction_14	31499.29044621416	NA	4	NA	TRUE	NA	NA	NA	C	coding	841	2526	2650	5175	35.0	-7	True	NA	NA
PB.11666.13	chr9	+	4609	19	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-10	-1760	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	18147.765701081717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1431	4293	316	4608	75.0	0	True	AAGAAA	-21
PB.11666.10	chr9	+	2154	1	genic	ERCC6L2	novel	NA	NA	NA	NA	-51	-51314	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	93	282	268	549	95.0	0	True	NA	NA
PB.11666.11	chr9	+	5171	19	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-40	-1228	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	18147.765701081717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1561	4686	346	5031	30.0	11	True	ATTAAA	-28
PB.5899.2	chr19	+	3258	11	full-splice_match	URI1	ENST00000392271.5	3444	11	187	-1	127	1	multi-exon	FALSE	canonical	1	158721	junction_1	261157.02825122283	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	111	1718	20.0	-73	False	ATTAAA	-18
PB.5899.3	chr19	+	2304	10	full-splice_match	URI1	ENST00000574110.5	2495	10	192	-1	142	1	multi-exon	FALSE	canonical	1	89007	junction_1	253086.24255955435	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	181	1668	35.0	-58	False	AGTAAA	-23
PB.5899.1	chr19	+	2633	11	novel_in_catalog	URI1	novel	1579	11	NA	NA	105	3	combination_of_known_junctions	TRUE	canonical	1	120991	junction_10	301443.4340087871	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	133	1614	15.0	-95	False	ATTAAA	-20
PB.5899.6	chr19	+	3006	10	incomplete-splice_match	URI1	ENST00000392271.5	3444	11	260	2533	200	-951	3prime_fragment	FALSE	canonical	1	158721	junction_1	272877.0148153619	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	38	1483	90.0	0	True	NA	NA
PB.5899.4	chr19	+	2288	11	full-splice_match	URI1	ENST00000392271.5	3444	11	252	904	192	0	multi-exon	FALSE	canonical	1	158721	junction_1	261157.02825122283	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	46	1653	40.0	-8	True	AGTAAA	-22
PB.5899.5	chr19	+	1638	11	novel_in_catalog	URI1	novel	1579	11	NA	NA	194	1	combination_of_known_junctions	FALSE	canonical	1	120991	junction_10	301443.4340087871	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	44	1525	35.0	-6	True	AGTAAA	-23
PB.10155.8	chr6	-	2893	11	novel_not_in_catalog	WASF1	novel	2675	9	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	12219	junction_9	153273.4146631111	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	515	2191	15.0	334	False	AATAAA	-18
PB.10155.9	chr6	-	2640	9	full-splice_match	WASF1	ENST00000392587.6	2675	9	34	1	2	-1	multi-exon	FALSE	canonical	1	116377	junction_8	96377.67343300716	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	259	1938	15.0	-16	True	AATAAA	-18
PB.10155.2	chr6	-	2801	10	full-splice_match	WASF1	ENST00000392588.5	3122	10	322	-1	-12	1	multi-exon	FALSE	canonical	1	27109	junction_8	133485.3641024197	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	418	2097	20.0	333	False	AATAAA	-20
PB.10155.3	chr6	-	3551	8	novel_in_catalog	WASF1	novel	2675	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	116377	junction_7	70674.41663179752	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	261	1838	20.0	-18	True	AATAAA	-19
PB.10155.1	chr6	-	2890	9	full-splice_match	WASF1	ENST00000392587.6	2675	9	23	-238	-9	238	multi-exon	FALSE	canonical	1	116377	junction_8	96377.67343300716	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	270	1949	35.0	-27	True	ATTAAA	-18
PB.10155.6	chr6	-	2637	10	novel_in_catalog	WASF1	novel	2675	9	NA	NA	33	0	no_combination_of_known_junctions	FALSE	canonical	1	1482	junction_9	138332.8389726999	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	255	1934	20.0	-7	True	AATAAA	-19
PB.10155.4	chr6	-	2754	10	full-splice_match	WASF1	ENST00000359451.6	3075	10	321	0	-13	0	multi-exon	FALSE	canonical	1	18030	junction_9	135141.30057375293	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	372	2051	20.0	332	False	AATAAA	-19
PB.10155.5	chr6	-	2685	10	novel_in_catalog	WASF1	novel	2675	9	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	1	8704	junction_9	139302.81295157762	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	303	1982	20.0	-8	True	AATAAA	-19
PB.4352.1	chr16	-	1642	5	full-splice_match	CDIPT	ENST00000566113.5	1671	5	45	-16	45	1	multi-exon	FALSE	canonical	1	35174	junction_4	475427.6498685157	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	303	809	10.0	61	True	NA	NA
PB.4352.2	chr16	-	1814	6	full-splice_match	CDIPT	ENST00000219789.10	2353	6	538	1	6	0	multi-exon	FALSE	canonical	1	847942	junction_4	156297.2528600551	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	342	983	15.0	22	True	NA	NA
PB.4352.5	chr16	-	1748	6	full-splice_match	CDIPT	ENST00000564296.5	1015	6	55	-788	-16	0	multi-exon	FALSE	canonical	1	43730	junction_5	422181.6862751865	NA	3	NA	TRUE	NA	NA	NA	C	coding	148	447	475	921	25.0	-1	True	NA	NA
PB.4352.4	chr16	-	1997	5	incomplete-splice_match	CDIPT	ENST00000569956.5	1532	7	-86	-23	-15	0	intron_retention	FALSE	canonical	1	847942	junction_4	173965.76082522675	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	613	1170	25.0	9195	False	NA	NA
PB.841.42	chr1	+	2330	10	incomplete-splice_match	IFI16	ENST00000295809.11	2867	12	5954	8	208	-1	5prime_fragment	FALSE	canonical	1	316112	junction_6	268468.2482086517	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	201	2084	30.0	-1	True	AATAAA	-20
PB.3801.7	chr15	-	2960	5	incomplete-splice_match	EHD4	ENST00000220325.8	6416	6	21	11952	-5	-11952	3prime_fragment	FALSE	canonical	1	431861	junction_1	19434.66437033323	NA	3	NA	TRUE	NA	NA	NA	C	coding	395	1188	64	1251	75.0	-4	True	NA	NA
PB.11614.7	chr9	+	2800	16	full-splice_match	CEP78	ENST00000647130.1	2003	16	-296	-501	4	-2	multi-exon	TRUE	canonical	1	16821	junction_1	47414.016241613615	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	593	2497	20.0	-5	True	AATAAA	-15
PB.11625.41	chr9	-	2571	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	-156	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	871364.6751391445	NA	11	2	TRUE	NA	NA	NA	B	coding	439	1320	198	1517	55.0	-1	True	AATATA	-33
PB.11625.42	chr9	-	2663	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-34	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	851338.187976534	NA	2	1	TRUE	NA	NA	NA	B	coding	221	666	935	1600	85.0	-52	False	NA	NA
PB.11625.43	chr9	-	2666	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-8	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	457	1374	230	1603	85.0	-26	True	NA	NA
PB.11625.44	chr9	-	2658	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-12	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	790309.6513899389	NA	4	1	TRUE	NA	NA	NA	B	coding	434	1305	234	1538	85.0	-30	True	NA	NA
PB.11625.45	chr9	-	2638	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	7	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	781904.0001667567	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	199	1518	85.0	355	False	NA	NA
PB.11625.46	chr9	-	2605	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	-90	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	915001.7304850483	NA	9	2	TRUE	NA	NA	NA	B	coding	221	666	877	1542	85.0	-1	True	NA	NA
PB.11625.47	chr9	-	2531	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	7	-137	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	835322.5098568797	NA	3	1	TRUE	NA	NA	NA	B	coding	438	1317	199	1515	10.0	355	False	AAAAAG	-10
PB.1108.12	chr1	-	2960	19	novel_in_catalog	INTS7	novel	4447	21	NA	NA	-1	3	no_combination_of_known_junctions	FALSE	canonical	1	1716	junction_3	60542.64551251722	NA	3	2	TRUE	NA	NA	NA	C	coding	740	2223	101	2323	25.0	7	True	ATTAAA	-19
PB.11318.1	chr8	+	2198	1	full-splice_match	AC104958.2	ENST00000605955.1	1141	1	-1052	-5	-1052	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	227	684	199	882	20.0	-275	False	AATAAA	-20
PB.7745.4	chr22	-	2064	15	novel_in_catalog	EIF3D	novel	2155	15	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	20617	junction_1	1034964.6612096551	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	123	1766	5.0	18	False	AATAAA	-18
PB.493.6	chr1	+	1727	9	novel_in_catalog	IFI44	novel	819	7	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	24719	junction_8	174430.21465254916	NA	2	NA	TRUE	NA	NA	NA	C	coding	457	1374	89	1462	25.0	-3	True	AATAAA	-22
PB.7745.1	chr22	-	1845	15	full-splice_match	EIF3D	ENST00000216190.12	2155	15	309	1	39	-1	multi-exon	TRUE	canonical	1	1603922	junction_14	759135.4858665594	NA	1	1	TRUE	NA	NA	NA	C	coding	548	1647	63	1709	20.0	78	False	AATAAA	-27
PB.7745.2	chr22	-	4352	14	novel_in_catalog	EIF3D	novel	2155	15	NA	NA	-41	1	intron_retention	FALSE	canonical	1	1603922	junction_13	787250.7521245305	NA	2	NA	TRUE	NA	NA	NA	C	coding	375	1128	3093	4220	10.0	-1	True	AATAAA	-23
PB.7745.3	chr22	-	1996	16	novel_in_catalog	EIF3D	novel	2155	15	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	11610	junction_15	1167901.3316715301	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	218	1864	10.0	9	False	AATAAA	-23
PB.11226.8	chr8	-	4500	17	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	9	-2	any annotated donor/acceptor	FALSE	canonical	1	8392	junction_12	176931.65061207252	NA	1	1	TRUE	NA	NA	NA	C	coding	461	1386	1019	2404	15.0	56	True	NA	NA
PB.493.4	chr1	+	3742	8	novel_in_catalog	IFI44	novel	819	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	315311	junction_1	117981.78601904996	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	93	1331	20.0	-7	True	AATAAA	-23
PB.11226.9	chr8	-	4425	16	novel_in_catalog	NBN	novel	4666	16	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	13638	junction_13	155028.6817051176	NA	2	NA	TRUE	NA	NA	NA	C	coding	646	1941	389	2329	15.0	0	True	NA	NA
PB.11128.9	chr8	-	4434	16	novel_not_in_catalog	RB1CC1	novel	6635	24	NA	NA	-1	12121	any annotated donor/acceptor	FALSE	canonical	1	14601	junction_1	95484.60550881138	NA	0	NA	TRUE	NA	NA	NA	C	coding	1301	3903	531	4433	75.0	-4	True	AAAAAG	-28
PB.5183.3	chr17	-	4797	12	full-splice_match	TEX2	ENST00000584379.5	4825	12	43	-15	-11	2	multi-exon	FALSE	canonical	1	134757	junction_11	45178.701881006855	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	117	3500	15.0	0	True	ATTAAA	-30
PB.5183.1	chr17	-	5066	12	full-splice_match	TEX2	ENST00000584379.5	4825	12	9	-250	9	4	multi-exon	FALSE	canonical	1	134757	junction_11	45178.701881006855	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	151	3534	40.0	-34	True	AATAAA	-19
PB.5183.6	chr17	-	4765	12	novel_not_in_catalog	TEX2	novel	5232	12	NA	NA	18	-3	intron_retention	FALSE	canonical	1	1591	junction_4	78008.307433851	NA	0	NA	TRUE	NA	NA	NA	C	coding	970	2913	142	3054	15.0	-25	True	ATTAAA	-25
PB.5912.9	chr19	+	3444	11	full-splice_match	LSM14A	ENST00000433627.9	3424	11	-26	6	17	3	multi-exon	FALSE	canonical	1	253280	junction_7	398291.83467904537	NA	12	NA	TRUE	NA	NA	NA	C	coding	463	1392	102	1493	45.0	17	True	AATAAA	-11
PB.5183.4	chr17	-	4820	12	full-splice_match	TEX2	ENST00000258991.7	5232	12	-33	445	-13	2	multi-exon	FALSE	canonical	1	2209	junction_8	78232.73112825042	NA	0	NA	TRUE	NA	NA	NA	C	coding	1134	3405	119	3523	15.0	-2	True	ATTAAA	-30
PB.5183.5	chr17	-	4640	11	novel_in_catalog	TEX2	novel	5232	12	NA	NA	-8	1	intron_retention	FALSE	canonical	1	4541	junction_4	80918.83991778428	NA	2	NA	TRUE	NA	NA	NA	C	coding	943	2832	94	2925	15.0	23	True	ATTAAA	-29
PB.5912.4	chr19	+	1797	10	full-splice_match	LSM14A	ENST00000544216.7	3596	10	-92	1891	-30	7	multi-exon	FALSE	canonical	1	253280	junction_7	393897.2544399846	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	170	1561	35.0	1	True	ATTAAA	-23
PB.5912.5	chr19	+	3325	10	novel_in_catalog	LSM14A	novel	559	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	101633	junction_4	414779.9760984397	NA	3	NA	TRUE	NA	NA	NA	C	coding	404	1215	163	1377	55.0	-232	False	AATAAA	-8
PB.5912.6	chr19	+	1837	11	full-splice_match	LSM14A	ENST00000433627.9	3424	11	-83	1670	-19	1	multi-exon	FALSE	canonical	1	253280	junction_7	398291.83467904537	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	159	1550	35.0	-228	False	ATTAAA	-17
PB.5912.7	chr19	+	2129	10	novel_in_catalog	LSM14A	novel	559	4	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	1	101633	junction_4	414779.9760984397	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	153	1367	30.0	-222	False	AATAAA	-16
PB.5912.1	chr19	+	3777	11	full-splice_match	LSM14A	ENST00000433627.9	3424	11	-127	-226	-63	-1	multi-exon	TRUE	canonical	1	253280	junction_7	398291.83467904537	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	203	1594	35.0	-272	False	AATAAA	-15
PB.5912.2	chr19	+	3286	9	novel_in_catalog	LSM14A	novel	559	4	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	1	101633	junction_4	434403.8546432772	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	181	1395	55.0	1	True	AATAAA	-8
PB.5912.3	chr19	+	2090	9	novel_in_catalog	LSM14A	novel	559	4	NA	NA	-31	-3	combination_of_known_junctions	FALSE	canonical	1	101633	junction_4	434403.8546432772	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	171	1385	30.0	0	True	AATAAA	-16
PB.11226.5	chr8	-	4525	17	incomplete-splice_match	NBN	ENST00000396252.6	4907	19	18560	143	-3	5	5prime_fragment	FALSE	canonical	1	46834	junction_15	160483.18357030238	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	404	2422	10.0	-2	True	NA	NA
PB.9498.9	chr5	-	2142	12	full-splice_match	APBB3	ENST00000412920.7	1455	12	-371	-316	-12	0	multi-exon	FALSE	canonical	1	31882	junction_6	73242.31210292189	NA	2	NA	TRUE	NA	NA	NA	C	coding	484	1455	372	1826	25.0	4	True	AATAAA	-18
PB.1108.14	chr1	-	4020	15	novel_in_catalog	INTS7	novel	4447	21	NA	NA	-23	24	intron_retention	FALSE	canonical	1	166877	junction_6	35341.94478272963	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	129	2339	40.0	-21	True	ATTAAA	-34
PB.1909.12	chr11	+	1652	10	novel_not_in_catalog	CD82	novel	538	7	NA	NA	2675	54	any annotated donor/acceptor	FALSE	canonical	1	2312	junction_1	375971.91299827205	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	35	1015	100.0	-1042	False	NA	NA
PB.1909.10	chr11	+	1765	11	novel_in_catalog	CD82	novel	538	7	NA	NA	-2	54	combination_of_known_junctions	FALSE	canonical	1	1962	junction_2	460795.65481350844	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	133	1128	100.0	0	True	NA	NA
PB.1909.11	chr11	+	1417	10	novel_not_in_catalog	CD82	novel	538	7	NA	NA	2643	-111	any annotated donor/acceptor	FALSE	canonical	1	4212	junction_1	375426.252034493	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	142	945	75.0	2	True	NA	NA
PB.5964.2	chr19	+	2825	4	full-splice_match	ZNF527	ENST00000588911.5	580	4	-93	-2152	7	0	multi-exon	FALSE	canonical	1	2628	junction_3	12024.81002852944	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	201	1934	25.0	-100	False	NA	NA
PB.5964.1	chr19	+	2822	5	full-splice_match	ZNF527	ENST00000436120.6	2828	5	8	-2	-8	2	multi-exon	FALSE	canonical	1	17755	junction_1	5210.936690029922	NA	2	NA	TRUE	NA	NA	NA	C	coding	609	1830	100	1929	15.0	1	True	NA	NA
PB.10483.1	chr7	+	3726	1	full-splice_match	AC018647.2	ENST00000605778.1	4200	1	-25	499	-25	-499	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-47	False	NA	NA
PB.6964.9	chr2	+	3952	17	novel_in_catalog	NRP2	novel	1531	4	NA	NA	-28	-33	combination_of_known_junctions	FALSE	canonical	1	7766	junction_16	63044.85596255926	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	635	3355	35.0	-3019	False	AATATA	-24
PB.8731.4	chr4	+	2343	14	full-splice_match	PGM2	ENST00000381967.8	3264	14	72	849	-3	75	multi-exon	FALSE	canonical	1	270403	junction_1	56721.0069521746	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	29	1867	20.0	-13	True	AATAAA	-11
PB.8731.5	chr4	+	2802	14	full-splice_match	PGM2	ENST00000381967.8	3264	14	73	389	-2	-389	multi-exon	FALSE	canonical	1	270403	junction_1	56721.0069521746	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	28	1866	25.0	-12	True	AATAGA	-18
PB.8731.1	chr4	+	3193	14	full-splice_match	PGM2	ENST00000381967.8	3264	14	73	-2	-2	2	multi-exon	FALSE	canonical	1	270403	junction_1	56721.0069521746	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	28	1866	10.0	-12	True	AAGAAA	-15
PB.8731.2	chr4	+	2214	14	full-splice_match	PGM2	ENST00000381967.8	3264	14	55	995	-20	-71	multi-exon	FALSE	canonical	1	270403	junction_1	56721.0069521746	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	46	1884	20.0	-30	True	CATAAA	-24
PB.8731.3	chr4	+	2044	14	full-splice_match	PGM2	ENST00000381967.8	3264	14	56	1164	-19	53	multi-exon	FALSE	canonical	1	270403	junction_1	56721.0069521746	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	45	1883	65.0	-29	True	NA	NA
PB.1995.13	chr11	-	3644	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	668722.8516834335	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	34	2868	30.0	6669	False	AATAAA	-13
PB.1995.12	chr11	-	3695	26	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	834193.930074584	NA	0	NA	TRUE	NA	NA	NA	C	coding	966	2901	19	2919	30.0	-5	True	AATAAA	-13
PB.1995.11	chr11	-	3708	26	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	834193.930074584	NA	2	NA	TRUE	NA	NA	NA	C	coding	969	2910	22	2931	30.0	6681	False	AATAAA	-13
PB.6639.4	chr2	-	2273	7	full-splice_match	LMAN2L	ENST00000434865.5	1163	7	2	-1112	2	-3	multi-exon	FALSE	canonical	1	4763	junction_6	84315.56935439358	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	317	949	30.0	2	True	AATGAA	-25
PB.6639.3	chr2	-	2309	7	novel_in_catalog	LMAN2L	novel	2397	8	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	14453	junction_4	75396.4653564741	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	404	985	30.0	2	True	AATGAA	-25
PB.6639.2	chr2	-	2403	8	full-splice_match	LMAN2L	ENST00000264963.8	2397	8	-9	3	-8	-3	multi-exon	FALSE	canonical	1	151619	junction_2	38416.87671121766	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	108	1079	30.0	-9	True	AATGAA	-25
PB.1995.15	chr11	-	3394	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	668722.8516834335	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2925	20	2944	30.0	-6	True	AATAAA	-13
PB.1995.14	chr11	-	3615	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	668722.8516834335	NA	4	NA	TRUE	NA	NA	NA	C	coding	944	2835	30	2864	30.0	6673	False	AATAAA	-13
PB.11013.2	chr8	+	3779	17	full-splice_match	FAM160B2	ENST00000289921.7	4245	17	-53	519	-4	0	multi-exon	FALSE	canonical	1	78570	junction_1	89458.71432046793	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2232	100	2331	10.0	5	True	AATAAA	-17
PB.2720.1	chr12	+	3047	1	full-splice_match	AC048341.2	ENST00000619323.1	491	1	-141	-2415	-141	2415	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	41	False	NA	NA
PB.11013.3	chr8	+	4110	17	novel_not_in_catalog	FAM160B2	novel	917	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	22454	junction_2	103376.14600143195	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	605	2662	10.0	9	True	AATAAA	-17
PB.7379.5	chr20	+	2076	6	full-splice_match	VAPB	ENST00000475243.5	7936	6	303	5557	50	-8	multi-exon	FALSE	canonical	1	369080	junction_4	118684.83967819986	NA	3	NA	TRUE	NA	NA	NA	C	coding	243	732	36	767	30.0	194	False	AATAAA	-9
PB.3985.2	chr15	-	1479	1	full-splice_match	RPP25	ENST00000322177.5	3049	1	676	894	676	-894	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	199	600	206	805	30.0	-1	True	AATAAA	-9
PB.8725.1	chr4	+	3991	9	full-splice_match	TBC1D19	ENST00000515568.1	713	9	-231	-3047	-33	-285	multi-exon	FALSE	canonical	1	6985	junction_8	27314.599541442578	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	144	968	25.0	-1	True	AATAAA	-11
PB.11013.1	chr8	+	3871	18	novel_not_in_catalog	FAM160B2	novel	917	3	NA	NA	-9	0	intron_retention	TRUE	canonical	1	22452	junction_15	109390.95218371993	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	105	1994	10.0	0	True	AATAAA	-17
PB.7379.1	chr20	+	7905	6	full-splice_match	VAPB	ENST00000475243.5	7936	6	27	4	27	-4	multi-exon	FALSE	canonical	1	369080	junction_4	118684.83967819986	NA	3	NA	TRUE	NA	NA	NA	C	coding	243	732	312	1043	35.0	5	True	AATAAA	-21
PB.7379.3	chr20	+	2140	4	full-splice_match	VAPB	ENST00000520497.1	937	4	-190	-1013	54	-8	multi-exon	FALSE	canonical	1	5592	junction_2	284656.50044610293	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	469	831	30.0	9	True	AATAAA	-9
PB.7379.2	chr20	+	2231	5	novel_in_catalog	VAPB	novel	7936	6	NA	NA	54	2	combination_of_known_junctions	FALSE	canonical	1	18017	junction_2	241911.93213582397	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	469	912	15.0	9	True	AATAAA	-19
PB.8678.1	chr4	+	2342	5	full-splice_match	NSG1	ENST00000433139.6	2254	5	-30	-58	-30	-1	multi-exon	TRUE	canonical	1	46704	junction_1	142293.2377917166	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	163	720	15.0	-597	False	AATAAA	-13
PB.8678.2	chr4	+	2288	5	incomplete-splice_match	NSG1	ENST00000621129.4	1483	6	52	-1	-14	1	intron_retention	FALSE	canonical	1	194430	junction_1	79287.92649893173	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	110	667	15.0	-14	True	AATAAA	-12
PB.8678.3	chr4	+	1916	5	incomplete-splice_match	NSG1	ENST00000621129.4	1483	6	57	366	-9	-310	3prime_fragment	FALSE	canonical	1	194430	junction_1	79287.92649893173	NA	2	NA	TRUE	NA	NA	NA	C	coding	185	558	105	662	30.0	-9	True	AATAAA	-15
PB.5092.1	chr17	+	1629	8	full-splice_match	ABI3	ENST00000225941.5	2109	8	480	0	296	0	multi-exon	FALSE	canonical	1	96292	junction_6	36885.84129611861	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	19	1119	0.0	-4	True	NA	NA
PB.5092.2	chr17	+	1461	8	full-splice_match	ABI3	ENST00000225941.5	2109	8	482	166	298	23	multi-exon	FALSE	canonical	1	96292	junction_6	36885.84129611861	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	17	1117	20.0	-2	True	NA	NA
PB.12011.6	chrX	+	2531	23	incomplete-splice_match	POLA1	ENST00000379059.7	5440	37	-25	253714	3	8919	3prime_fragment	FALSE	canonical	1	10062	junction_1	46012.222855265805	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2490	41	2530	55.0	1	True	AATAAA	-5
PB.594.1	chr1	+	2454	11	novel_in_catalog	ATXN7L2	novel	3022	12	NA	NA	-42	-2	combination_of_known_junctions	FALSE	canonical	1	24483	junction_1	24726.74295272226	NA	0	NA	TRUE	NA	NA	NA	B	coding	754	2265	58	2322	15.0	-62	False	AAAAAG	-17
PB.9354.18	chr5	-	2554	12	full-splice_match	ELL2	ENST00000237853.8	6046	12	206	3286	-17	2565	multi-exon	FALSE	canonical	1	26720	junction_2	111929.90393430972	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	145	2067	75.0	7942	False	NA	NA
PB.9354.19	chr5	-	2131	12	full-splice_match	ELL2	ENST00000237853.8	6046	12	198	3717	-25	2134	multi-exon	FALSE	canonical	1	26720	junction_2	111929.90393430972	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	153	2075	30.0	-1	True	AATAAA	-26
PB.9354.16	chr5	-	3435	13	novel_not_in_catalog	ELL2	novel	6046	12	NA	NA	-1	-2439	any annotated donor/acceptor	FALSE	canonical	1	26720	junction_2	116336.39541564608	NA	4	NA	TRUE	NA	NA	NA	C	coding	503	1512	590	2101	20.0	-4	True	AATATA	-25
PB.9354.17	chr5	-	3405	12	full-splice_match	ELL2	ENST00000237853.8	6046	12	198	2443	-25	-2443	multi-exon	FALSE	canonical	1	26720	junction_2	111929.90393430972	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	153	2075	25.0	-1	True	AATATA	-21
PB.9354.14	chr5	-	3616	12	novel_not_in_catalog	ELL2	novel	6046	12	NA	NA	0	-2301	any annotated donor/acceptor	FALSE	canonical	1	14981	junction_8	116306.96344203746	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	777	2144	65.0	-3	True	AATAAA	-21
PB.11013.5	chr8	+	3016	18	novel_not_in_catalog	FAM160B2	novel	917	3	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	46290	junction_17	100340.40848919515	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2232	95	2326	10.0	10	True	AATAAA	-17
PB.8485.4	chr3	-	2410	6	novel_not_in_catalog	SSR3	novel	3716	5	NA	NA	8	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	449531.30164801655	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	21	578	30.0	-3	True	ATTAAA	-12
PB.9354.10	chr5	-	3406	11	novel_in_catalog	ELL2	novel	6046	12	NA	NA	-4	-2299	no_combination_of_known_junctions	FALSE	canonical	1	20589	junction_9	119481.04220837714	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	421	1932	60.0	-7	True	AATAAA	-23
PB.9354.11	chr5	-	5501	11	novel_in_catalog	ELL2	novel	6046	12	NA	NA	-5	-2299	intron_retention	FALSE	canonical	1	39156	junction_8	108168.92636224139	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	133	1992	60.0	-8	True	AATAAA	-23
PB.8485.5	chr3	-	2394	6	novel_not_in_catalog	SSR3	novel	3716	5	NA	NA	7	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	449531.30164801655	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	22	579	30.0	-4	True	ATTAAA	-12
PB.9788.2	chr6	+	2906	2	full-splice_match	U91328.1	ENST00000606723.2	4130	2	0	1224	0	-1224	multi-exon	FALSE	canonical	1	25689	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-5	True	TATAAA	-25
PB.8555.12	chr3	-	1974	7	full-splice_match	ABCC5	ENST00000382494.6	1923	7	-52	1	-2	-1	multi-exon	FALSE	canonical	1	33524	junction_2	87568.72307841043	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	168	794	25.0	9864	False	AATAAA	-16
PB.8485.2	chr3	-	2639	6	novel_not_in_catalog	SSR3	novel	3716	5	NA	NA	-7	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	449531.30164801655	NA	1	1	TRUE	NA	NA	NA	C	coding	185	558	68	625	30.0	-6	True	ATTAAA	-12
PB.8485.3	chr3	-	2540	6	novel_not_in_catalog	SSR3	novel	3716	5	NA	NA	1	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	449531.30164801655	NA	11	1	TRUE	NA	NA	NA	C	coding	185	558	28	585	30.0	-10	True	ATTAAA	-12
PB.8485.1	chr3	-	3658	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	56	2	-3	-2	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	2	NA	TRUE	NA	NA	NA	C	coding	185	558	40	597	15.0	-22	True	ATTAAA	-18
PB.239.6	chr1	-	2387	1	incomplete-splice_match	SDC3	ENST00000336798.11	6392	3	6683	204	6683	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	126	381	1778	2158	80.0	8728	False	NA	NA
PB.239.3	chr1	-	4655	4	incomplete-splice_match	SDC3	ENST00000339394.6	1580	5	30097	-3464	76	-204	5prime_fragment	FALSE	canonical	1	248678	junction_3	44801.76368800179	NA	0	NA	TRUE	NA	NA	NA	B	coding	346	1041	75	1115	80.0	2121	False	NA	NA
PB.1195.8	chr1	+	2777	13	novel_not_in_catalog	GNPAT	novel	839	6	NA	NA	1	-260	any annotated donor/acceptor	FALSE	canonical	1	2707	junction_12	153324.59588348286	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	169	1962	30.0	-1	True	AATAAA	-15
PB.6065.1	chr19	+	2448	15	full-splice_match	BCAM	ENST00000270233.11	2453	15	4	1	4	-1	multi-exon	FALSE	canonical	1	351156	junction_1	277233.3416961703	NA	15	1	TRUE	NA	NA	NA	A	coding	628	1887	63	1949	15.0	-7	True	AATAAA	-23
PB.11324.1	chr8	-	1278	5	full-splice_match	C8orf76	ENST00000521310.5	948	5	-24	-306	9	168	multi-exon	FALSE	canonical	1	211325	junction_4	70046.57724819607	NA	0	NA	TRUE	NA	NA	NA	A	coding	324	975	23	997	25.0	8	True	AATGAA	-6
PB.2685.21	chr12	-	2498	14	novel_not_in_catalog	BAZ2A	novel	8831	30	NA	NA	1285	-14	intron_retention	FALSE	canonical	1	6857	junction_13	191952.47423008972	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2316	182	2497	65.0	-39	True	AAAAAG	-43
PB.2685.20	chr12	-	2619	15	novel_not_in_catalog	BAZ2A	novel	8831	30	NA	NA	-124	-14	intron_retention	FALSE	non_canonical	0	0	junction_14	206257.69067511798	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2316	303	2618	65.0	9043	False	AAAAAG	-43
PB.2685.23	chr12	-	2495	13	incomplete-splice_match	BAZ2A	ENST00000549884.5	6050	29	-104	7652	-7	-29	3prime_fragment	FALSE	canonical	1	110836	junction_12	155128.40503942658	NA	1	1	TRUE	NA	NA	NA	C	coding	767	2301	194	2494	60.0	10	True	AAAAAG	-28
PB.2685.22	chr12	-	2404	13	novel_not_in_catalog	BAZ2A	novel	8831	30	NA	NA	1289	-14	intron_retention	FALSE	canonical	1	4179	junction_12	174774.04199224082	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2316	88	2403	65.0	-35	True	AAAAAG	-43
PB.2685.25	chr12	-	2544	13	novel_in_catalog	BAZ2A	novel	8831	30	NA	NA	6	-254	intron_retention	FALSE	canonical	1	44055	junction_12	175958.27494860505	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2259	285	2543	30.0	-26	True	AAGAAA	-8
PB.2685.24	chr12	-	2494	13	incomplete-splice_match	BAZ2A	ENST00000551812.5	8600	29	8	10091	-5	-29	3prime_fragment	FALSE	canonical	1	33743	junction_12	169042.50684985516	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2307	187	2493	60.0	-24	True	AAAAAG	-28
PB.10514.1	chr7	-	3314	13	novel_not_in_catalog	POLR2J4	novel	6466	16	NA	NA	2	5448	intron_retention	TRUE	canonical	1	3341	junction_1	52643.74092286913	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	2119	2790	0.0	1	True	NA	NA
PB.11654.2	chr9	+	2324	4	novel_in_catalog	CARD19	novel	855	6	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	295956	junction_2	117614.65584507551	NA	1	NA	TRUE	NA	NA	NA	B	coding	69	210	152	361	10.0	-112	False	ATTAAA	-15
PB.11976.1	chrX	-	2156	6	novel_not_in_catalog	GEMIN8	novel	1682	5	NA	NA	-11	1550	any annotated donor/acceptor	FALSE	canonical	1	18784	junction_1	54394.858023162444	NA	3	1	TRUE	NA	NA	NA	B	coding	242	729	244	972	35.0	-13	True	NA	NA
PB.11976.2	chrX	-	2313	5	novel_in_catalog	GEMIN8	novel	1682	5	NA	NA	0	719	combination_of_known_junctions	FALSE	canonical	1	85314	junction_4	33595.250478118185	NA	0	NA	TRUE	NA	NA	NA	B	coding	211	636	325	960	90.0	-1	True	NA	NA
PB.11976.3	chrX	-	4779	4	incomplete-splice_match	GEMIN8	ENST00000332885.7	868	5	-300	-439	-22	1	intron_retention	FALSE	canonical	1	120807	junction_3	23030.08034433807	NA	1	NA	TRUE	NA	NA	NA	B	coding	310	933	3606	4538	15.0	-24	True	CATAAA	-18
PB.11976.4	chrX	-	1200	5	novel_in_catalog	GEMIN8	novel	1682	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	85314	junction_4	33595.250478118185	NA	0	NA	TRUE	NA	NA	NA	B	coding	211	636	325	960	15.0	-1	True	CATAAA	-17
PB.11654.1	chr9	+	5091	3	novel_in_catalog	CARD19	novel	855	6	NA	NA	-49	0	intron_retention	FALSE	canonical	1	522228	junction_1	20649.5	NA	3	NA	TRUE	NA	NA	NA	B	coding	54	165	178	342	10.0	-3	True	ATTAAA	-16
PB.5126.1	chr17	+	1942	6	full-splice_match	PCTP	ENST00000268896.9	2044	6	100	2	-15	-1	multi-exon	FALSE	canonical	1	142946	junction_1	48483.97834749125	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	26	670	15.0	-2	True	AATAAA	-15
PB.5126.3	chr17	+	1871	6	novel_not_in_catalog	PCTP	novel	2044	6	NA	NA	-14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	112064.42204839143	NA	1	1	TRUE	NA	NA	NA	C	coding	60	183	168	350	15.0	0	True	AATAAA	-16
PB.5126.2	chr17	+	2683	6	novel_not_in_catalog	PCTP	novel	2044	6	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	2832	junction_1	121563.65695947123	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	46	654	15.0	6	True	AATAAA	-15
PB.3460.4	chr14	+	2370	8	full-splice_match	AP5M1	ENST00000261558.7	11737	8	152	9215	5	-547	multi-exon	FALSE	canonical	1	262388	junction_2	15262.01673489865	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	255	1727	20.0	24	True	AATAAA	-28
PB.3460.5	chr14	+	2693	8	novel_in_catalog	AP5M1	novel	11737	8	NA	NA	1	-41	intron_retention	FALSE	canonical	1	12619	junction_1	91004.67536924257	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	381	1544	60.0	1	True	NA	NA
PB.3460.6	chr14	+	2966	8	novel_not_in_catalog	AP5M1	novel	11737	8	NA	NA	1	1	intron_retention	FALSE	canonical	1	12066	junction_2	94796.80408222675	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	375	1775	10.0	-8	True	ATTAAA	-20
PB.3460.7	chr14	+	2642	8	full-splice_match	AP5M1	ENST00000261558.7	11737	8	122	8973	5	-305	multi-exon	FALSE	canonical	1	262388	junction_2	15262.01673489865	NA	4	NA	TRUE	NA	NA	NA	C	coding	490	1473	285	1757	30.0	-6	True	AATGAA	-27
PB.11855.4	chr9	+	4109	4	incomplete-splice_match	ABL1	ENST00000318560.5	5766	11	43348	7	43348	-7	5prime_fragment	FALSE	canonical	1	420109	junction_3	46493.882531886804	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	40	2124	30.0	-8737	False	AATAAA	-12
PB.3460.1	chr14	+	2147	2	full-splice_match	AP5M1	ENST00000554931.1	1691	2	123	-579	-9	579	multi-exon	FALSE	canonical	1	310853	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	269	1123	30.0	10	True	AATAAA	-39
PB.3460.2	chr14	+	2718	8	full-splice_match	AP5M1	ENST00000261558.7	11737	8	349	8670	164	-2	multi-exon	FALSE	canonical	1	262388	junction_2	15262.01673489865	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	58	1530	15.0	-9165	False	ATTAAA	-17
PB.3460.3	chr14	+	3509	2	full-splice_match	AP5M1	ENST00000554931.1	1691	2	105	-1923	3	1923	multi-exon	FALSE	canonical	1	310853	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	287	1141	15.0	-8	True	ATTAAA	-17
PB.3460.8	chr14	+	2064	2	full-splice_match	AP5M1	ENST00000554931.1	1691	2	49	-422	33	422	multi-exon	FALSE	canonical	1	310853	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	343	1197	35.0	2	True	AATAAA	-29
PB.3460.9	chr14	+	4283	8	full-splice_match	AP5M1	ENST00000261558.7	11737	8	87	7367	-30	1301	multi-exon	FALSE	canonical	1	262388	junction_2	15262.01673489865	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	320	1792	60.0	0	True	AATAAA	-11
PB.1873.4	chr11	+	3484	10	full-splice_match	ELP4	ENST00000640961.1	8164	10	67	4613	0	1142	multi-exon	FALSE	canonical	1	166398	junction_4	32602.552957675332	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	19	1293	15.0	-3	True	GATAAA	-19
PB.1873.5	chr11	+	3365	10	full-splice_match	ELP4	ENST00000640961.1	8164	10	67	4732	0	1023	multi-exon	FALSE	canonical	1	166398	junction_4	32602.552957675332	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	19	1293	45.0	-3	True	AGTAAA	-37
PB.1873.2	chr11	+	3024	10	full-splice_match	ELP4	ENST00000640961.1	8164	10	63	5077	1	678	multi-exon	FALSE	canonical	1	166398	junction_4	32602.552957675332	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	23	1297	30.0	-7	True	AATAAA	-17
PB.1873.3	chr11	+	4206	10	full-splice_match	ELP4	ENST00000640961.1	8164	10	67	3891	0	1864	multi-exon	FALSE	canonical	1	166398	junction_4	32602.552957675332	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	19	1293	70.0	-3	True	TTTAAA	-35
PB.1873.1	chr11	+	1560	10	full-splice_match	ELP4	ENST00000640961.1	8164	10	55	6549	0	-2	multi-exon	FALSE	canonical	1	166398	junction_4	32602.552957675332	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	31	1305	30.0	-15	True	AATAAA	-23
PB.6973.14	chr2	+	2854	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	140	4594	-20	-345	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	98	1075	90.0	-194	False	NA	NA
PB.7951.13	chr3	-	3449	16	novel_in_catalog	XPC	novel	3832	16	NA	NA	0	-183	combination_of_known_junctions	FALSE	canonical	1	1220	junction_15	87888.5422206002	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	34	2838	65.0	-1	True	NA	NA
PB.6973.15	chr2	+	2647	9	full-splice_match	CREB1	ENST00000432329.6	7650	9	58	4945	10	-696	multi-exon	FALSE	canonical	1	93908	junction_4	124556.02006501934	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	200	1219	85.0	-12	True	GATAAA	-17
PB.8378.1	chr3	-	1623	10	novel_in_catalog	RUVBL1	novel	1113	5	NA	NA	14	-18	intron_retention	FALSE	canonical	1	5345	junction_1	326388.3883041835	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	87	1214	75.0	1	True	NA	NA
PB.9416.19	chr5	+	4265	14	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	1	-307	combination_of_known_junctions	FALSE	canonical	1	26844	junction_11	97653.14539470446	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	558	1928	85.0	-7	True	AATGAA	-30
PB.8378.3	chr3	-	1616	11	full-splice_match	RUVBL1	ENST00000322623.9	1761	11	144	1	144	0	multi-exon	FALSE	canonical	1	560231	junction_10	168569.67583453437	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	137	1327	30.0	131	False	NA	NA
PB.7951.12	chr3	-	3325	15	novel_in_catalog	XPC	novel	3832	16	NA	NA	0	-164	no_combination_of_known_junctions	FALSE	canonical	1	4150	junction_6	92157.92038627755	NA	6	NA	TRUE	NA	NA	NA	C	coding	657	1974	34	2007	70.0	-1	True	AAAAAG	-12
PB.8378.4	chr3	-	1867	12	novel_not_in_catalog	RUVBL1	novel	1113	5	NA	NA	-7	1	any annotated donor/acceptor	FALSE	canonical	1	163	junction_2	381587.03527777595	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	108	1379	30.0	-20	True	NA	NA
PB.10607.9	chr7	+	4360	32	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	111	573	111	160	intron_retention	FALSE	canonical	1	3722	junction_21	553993.6477799553	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	206	3079	35.0	-18	True	ATTAAA	-23
PB.12303.26	chrX	-	3067	9	full-splice_match	IDS	ENST00000340855.10	7619	9	17	4535	17	-4535	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	194	1846	35.0	-25	True	AATAAA	-22
PB.12303.27	chrX	-	2832	9	full-splice_match	IDS	ENST00000340855.10	7619	9	7	4780	7	-4780	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	204	1856	30.0	-35	True	ATTAAA	-31
PB.12303.24	chrX	-	5006	9	novel_not_in_catalog	IDS	novel	7619	9	NA	NA	-26	-2528	any annotated donor/acceptor	FALSE	canonical	1	10179	junction_7	352850.36085596896	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	396	1778	30.0	-1	True	NA	NA
PB.12303.22	chrX	-	5196	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	25	-2528	combination_of_known_junctions	FALSE	canonical	1	56250	junction_3	411700.0325144451	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	186	1124	30.0	-17	True	NA	NA
PB.12303.23	chrX	-	5050	9	full-splice_match	IDS	ENST00000340855.10	7619	9	41	2528	-26	-2528	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	170	1822	30.0	-1	True	NA	NA
PB.12303.20	chrX	-	4876	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	-2528	no_combination_of_known_junctions	FALSE	canonical	1	43426	junction_1	379955.59974082257	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	170	1648	30.0	-1	True	NA	NA
PB.12303.21	chrX	-	5317	11	novel_in_catalog	IDS	novel	7619	9	NA	NA	7	-2528	combination_of_known_junctions	FALSE	canonical	1	56236	junction_8	470489.6645080421	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	1607	2089	30.0	-35	True	NA	NA
PB.5496.2	chr18	-	2406	1	novel_in_catalog	ALPK2	novel	7303	13	NA	NA	393	3819	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	490	1473	687	2159	15.0	20	True	ATTAAA	-14
PB.12303.28	chrX	-	2542	9	full-splice_match	IDS	ENST00000340855.10	7619	9	8	5069	8	-5069	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	203	1855	35.0	-34	True	AATAAA	-31
PB.12303.29	chrX	-	2349	9	full-splice_match	IDS	ENST00000340855.10	7619	9	39	5231	-28	4910	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	172	1824	70.0	-3	True	NA	NA
PB.1132.21	chr1	-	4133	34	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	-3	78	any annotated donor/acceptor	FALSE	canonical	1	470	junction_2	61660.328439025114	NA	3	NA	TRUE	NA	NA	NA	C	coding	1319	3960	28	3987	40.0	5	True	AATAAA	-21
PB.8853.39	chr4	-	3761	25	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-5	0	no_combination_of_known_junctions	FALSE	canonical	1	6270	junction_6	355512.26631885243	NA	2	NA	TRUE	NA	NA	NA	C	coding	1080	3243	107	3349	20.0	-48	True	ATTAAA	-13
PB.1132.23	chr1	-	1961	2	full-splice_match	RAB3GAP2	ENST00000462353.1	1906	2	-37	-18	16	18	multi-exon	FALSE	canonical	1	1826	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	3	True	AGTAAA	-33
PB.1132.22	chr1	-	4231	35	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	-6	-69	any annotated donor/acceptor	FALSE	canonical	1	133931	junction_18	49345.423857869566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1369	4107	124	4230	45.0	-31	True	AATAAA	-20
PB.11940.3	chrY	+	2295	13	full-splice_match	CSF2RA	ENST00000381524.8_PAR_Y	2291	13	-19	15	-11	-15	multi-exon	FALSE	canonical	1	18	junction_3	114.25662514221608	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	206	1408	80.0	NA	False	NA	NA
PB.11940.2	chrY	+	1840	13	full-splice_match	CSF2RA	ENST00000381529.8_PAR_Y	1816	13	-11	-13	-11	0	multi-exon	FALSE	canonical	1	18	junction_3	114.27485749523191	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	182	1384	15.0	NA	False	NA	NA
PB.11940.1	chrY	+	1824	13	full-splice_match	CSF2RA	ENST00000381524.8_PAR_Y	2291	13	-27	494	-19	-35	multi-exon	FALSE	canonical	1	18	junction_3	114.25662514221608	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	214	1416	75.0	NA	False	NA	NA
PB.8283.12	chr3	+	2654	2	incomplete-splice_match	BBX	ENST00000458347.1	410	3	2378	-2239	2378	1368	5prime_fragment	FALSE	canonical	1	249070	junction_1	0.0	NA	18	NA	TRUE	NA	NA	NA	C	coding	124	375	27	401	85.0	5329	False	NA	NA
PB.8283.14	chr3	+	3284	1	incomplete-splice_match	BBX	ENST00000415149.6	8930	17	284981	124	9326	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	1058	1357	55.0	NA	False	AATAAA	-29
PB.8283.15	chr3	+	1897	1	incomplete-splice_match	BBX	ENST00000415149.6	8930	17	286376	116	10721	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-37
PB.11841.9	chr9	+	1820	3	full-splice_match	PTPA	ENST00000434095.2	870	3	0	-950	0	0	multi-exon	FALSE	canonical	1	13732	junction_1	664416.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	ATTAAA	-21
PB.9416.10	chr5	+	3742	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	-5	-785	combination_of_known_junctions	FALSE	canonical	1	65772	junction_1	72978.03231291223	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	633	1883	30.0	9	True	GATAAA	-16
PB.11841.7	chr9	+	1778	3	full-splice_match	PTPA	ENST00000435132.5	618	3	13	-1173	13	0	multi-exon	FALSE	canonical	1	13951	junction_1	664306.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5527	False	ATTAAA	-21
PB.10674.6	chr7	-	5819	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	13	1020	13	-1020	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1589	4770	258	5027	55.0	26	False	NA	NA
PB.11841.5	chr9	+	1926	3	full-splice_match	PTPA	ENST00000419582.5	952	3	14	-988	14	0	multi-exon	FALSE	canonical	1	31598	junction_1	655483.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	67	204	157	360	15.0	0	True	ATTAAA	-21
PB.11841.4	chr9	+	1707	3	full-splice_match	PTPA	ENST00000414510.5	1153	3	104	-658	-6	0	multi-exon	FALSE	canonical	1	282390	junction_1	530087.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	ATTAAA	-21
PB.11841.3	chr9	+	1951	3	full-splice_match	PTPA	ENST00000423100.5	988	3	-17	-946	-17	0	multi-exon	FALSE	canonical	1	157749	junction_1	592407.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-8169	False	ATTAAA	-20
PB.9416.13	chr5	+	2765	13	novel_not_in_catalog	CSNK1G3	novel	4635	13	NA	NA	29	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	91846.34693617832	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	458	1708	20.0	-48	True	AATAAA	-27
PB.8320.14	chr3	-	3259	2	incomplete-splice_match	CD80	ENST00000478182.5	1491	6	-63	27386	-17	-10507	3prime_fragment	FALSE	canonical	1	73795	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-6	True	NA	NA
PB.12346.2	chrX	+	1384	5	novel_not_in_catalog	RPL10	novel	1656	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	588	junction_1	1312122.7789527501	NA	2	NA	TRUE	NA	NA	NA	C	coding	110	333	85	417	20.0	1	True	AATAAA	-16
PB.12346.3	chrX	+	2331	2	novel_in_catalog	RPL10	novel	1656	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	3405131	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	1799	2116	20.0	1	True	AATAAA	-20
PB.12346.1	chrX	+	2540	1	novel_in_catalog	RPL10	novel	1284	8	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	2008	2325	20.0	0	True	AATAAA	-20
PB.10674.4	chr7	-	6519	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	1	332	1	-332	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1589	4770	270	5039	15.0	14	False	NA	NA
PB.12346.4	chrX	+	747	6	full-splice_match	RPL10	ENST00000344746.8	2278	6	108	1423	-17	-1	multi-exon	FALSE	canonical	1	485325	junction_1	1117778.0862404488	NA	2	NA	TRUE	NA	NA	NA	C	coding	214	645	41	685	20.0	-1802	False	AATAAA	-20
PB.7848.1	chr22	+	3376	1	full-splice_match	Z97055.2	ENST00000564696.1	1463	1	-90	-1823	-53	-1616	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	100	303	745	1047	10.0	-8305	False	AATAAA	-17
PB.9416.15	chr5	+	4199	13	full-splice_match	CSNK1G3	ENST00000345990.8	4635	13	129	307	-32	-307	multi-exon	FALSE	canonical	1	65772	junction_1	79492.88491793707	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	591	1862	85.0	-40	True	AATGAA	-30
PB.2103.4	chr11	+	3191	9	novel_in_catalog	RAD9A	novel	912	3	NA	NA	13	-19	intron_retention	FALSE	canonical	1	131506	junction_3	26652.49683161739	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	1413	2360	85.0	2	True	NA	NA
PB.2103.3	chr11	+	2505	10	novel_in_catalog	RAD9A	novel	912	3	NA	NA	-7	-19	intron_retention	FALSE	canonical	1	131506	junction_4	28020.818607458612	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	466	1674	85.0	-25	True	NA	NA
PB.2103.2	chr11	+	2242	12	novel_not_in_catalog	RAD9A	novel	912	3	NA	NA	-9	-19	any annotated donor/acceptor	FALSE	canonical	1	271	junction_3	71780.12778347201	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	468	1157	85.0	-27	True	NA	NA
PB.2103.1	chr11	+	2092	11	full-splice_match	RAD9A	ENST00000307980.6	2119	11	8	19	2	-19	multi-exon	FALSE	canonical	1	120493	junction_2	30064.62558157011	NA	2	NA	TRUE	NA	NA	NA	C	coding	391	1176	86	1261	85.0	-34	True	NA	NA
PB.9416.14	chr5	+	4326	14	novel_not_in_catalog	CSNK1G3	novel	4635	13	NA	NA	30	-272	any annotated donor/acceptor	FALSE	canonical	1	1613	junction_1	100099.29779175461	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	683	1954	20.0	-47	True	NA	NA
PB.3755.3	chr15	-	3109	3	novel_not_in_catalog	SLC12A6	novel	7286	25	NA	NA	3183	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	100472.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-19
PB.3755.2	chr15	-	5860	26	novel_not_in_catalog	SLC12A6	novel	7286	25	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	69928.09092438889	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	110	3409	20.0	-16	True	AATAAA	-19
PB.3755.1	chr15	-	6576	26	novel_not_in_catalog	SLC12A6	novel	7286	25	NA	NA	-22	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	69928.09092438889	NA	1	1	TRUE	NA	NA	NA	C	coding	1099	3300	124	3423	20.0	-30	True	AATAAA	-19
PB.10338.53	chr6	-	5245	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-10	123	no_combination_of_known_junctions	FALSE	canonical	1	12566	junction_12	123520.72896314813	NA	5	NA	TRUE	NA	NA	NA	C	coding	1114	3345	148	3492	5.0	-3	True	ATTAAA	-21
PB.10338.52	chr6	-	5492	23	full-splice_match	THBS2	ENST00000366787.7	5811	23	23	296	23	116	multi-exon	FALSE	canonical	1	28255	junction_22	118378.6012569923	NA	10	1	TRUE	NA	NA	NA	C	coding	1172	3519	228	3746	20.0	-176	False	ATTAAA	-14
PB.3755.5	chr15	-	4453	25	full-splice_match	SLC12A6	ENST00000560611.5	4239	25	-218	4	-218	0	multi-exon	FALSE	canonical	1	80143	junction_21	60142.79113595631	NA	1	1	TRUE	NA	NA	NA	C	coding	1150	3453	383	3835	30.0	6061	False	TTTAAA	-5
PB.3755.4	chr15	-	4061	25	full-splice_match	SLC12A6	ENST00000290209.9	7286	25	-41	3266	-41	0	multi-exon	FALSE	canonical	1	69488	junction_24	62783.73475326001	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	143	3442	35.0	-49	True	TTTAAA	-6
PB.8342.2	chr3	+	3069	4	full-splice_match	FAM162A	ENST00000469967.1	1015	4	-25	-2029	-3	76	multi-exon	FALSE	canonical	1	1640372	junction_1	292288.06648502697	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	94	519	35.0	-9	True	AATAAA	-8
PB.8342.3	chr3	+	2362	1	novel_in_catalog	FAM162A	novel	801	6	NA	NA	-3	-21408	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	13	True	NA	NA
PB.9416.16	chr5	+	3230	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	-31	334	combination_of_known_junctions	FALSE	canonical	1	65772	junction_1	66229.41761523267	NA	2	NA	TRUE	NA	NA	NA	C	coding	415	1248	590	1837	30.0	-39	True	AATAAA	-22
PB.6833.2	chr2	+	2228	16	full-splice_match	DYNC1I2	ENST00000340296.8	2589	16	56	305	-5	95	multi-exon	FALSE	canonical	1	295	junction_4	104902.86758660762	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	173	2011	35.0	-4	True	AATATA	-16
PB.10338.59	chr6	-	5378	22	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	-10	122	any annotated donor/acceptor	FALSE	canonical	1	880	junction_19	123503.54676038482	NA	8	NA	TRUE	NA	NA	NA	C	coding	897	2694	933	3626	5.0	-3	True	ATTAAA	-20
PB.10068.9	chr6	+	2949	26	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-122	26526	1	8268	3prime_fragment	FALSE	canonical	1	148676	junction_1	65448.61780766955	NA	0	NA	TRUE	NA	NA	NA	B	coding	896	2688	262	2949	40.0	-2	True	TTTAAA	-32
PB.10068.8	chr6	+	4147	32	novel_in_catalog	MYO6	novel	8692	36	NA	NA	1	-41	combination_of_known_junctions	FALSE	canonical	1	148676	junction_1	98318.99875831034	NA	1	NA	TRUE	NA	NA	NA	B	coding	1253	3762	262	4023	25.0	-2	True	TATAAA	-17
PB.10315.5	chr6	-	3745	9	novel_in_catalog	TCP1	novel	2499	12	NA	NA	0	9	intron_retention	FALSE	canonical	1	544225	junction_7	855865.7683318304	NA	2	NA	TRUE	NA	NA	NA	B	coding	401	1206	2450	3655	20.0	-1	True	ATTAAA	-17
PB.10315.7	chr6	-	3052	12	novel_in_catalog	TCP1	novel	2499	12	NA	NA	2	9	intron_retention	FALSE	canonical	1	5306	junction_11	876554.3027430881	NA	2	NA	TRUE	NA	NA	NA	B	coding	534	1605	1358	2962	20.0	1	True	ATTAAA	-17
PB.10068.3	chr6	+	2151	18	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-137	49576	3	-14782	3prime_fragment	FALSE	canonical	1	148676	junction_1	47675.04769578997	NA	0	NA	TRUE	NA	NA	NA	B	coding	625	1875	277	2151	65.0	-85	False	NA	NA
PB.10068.2	chr6	+	5255	32	novel_in_catalog	MYO6	novel	8692	36	NA	NA	0	-386	combination_of_known_junctions	FALSE	canonical	1	148676	junction_1	98318.99875831034	NA	0	NA	TRUE	NA	NA	NA	B	coding	1253	3762	280	4041	30.0	-88	False	AATAAA	-10
PB.10068.1	chr6	+	4790	32	novel_in_catalog	MYO6	novel	8692	36	NA	NA	-7	537	combination_of_known_junctions	FALSE	canonical	1	148676	junction_1	98318.99875831034	NA	1	NA	TRUE	NA	NA	NA	B	coding	1253	3762	287	4048	40.0	-95	False	AATAAA	-26
PB.7832.1	chr22	+	611	3	full-splice_match	SMDT1	ENST00000331479.3	1567	3	5	951	0	-20	multi-exon	TRUE	canonical	1	1093910	junction_1	140152.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	70	393	65.0	0	True	NA	NA
PB.10068.6	chr6	+	2624	23	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-69	34794	54	0	3prime_fragment	FALSE	canonical	1	148676	junction_1	49414.266634179665	NA	0	NA	TRUE	NA	NA	NA	B	coding	805	2415	209	2623	15.0	5	True	AAGAAA	-32
PB.10068.5	chr6	+	3174	27	novel_not_in_catalog	MYO6	novel	8692	36	NA	NA	-6	8368	any annotated donor/acceptor	FALSE	canonical	1	1640	junction_2	91314.08360947324	NA	0	NA	TRUE	NA	NA	NA	B	coding	929	2787	387	3173	65.0	-77	False	AAAACA	-36
PB.7832.2	chr22	+	3660	1	novel_in_catalog	SMDT1	novel	1567	3	NA	NA	4	10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	4	True	AATAAA	-25
PB.7963.2	chr3	+	2070	4	full-splice_match	BTD	ENST00000643237.1	4248	4	358	1820	0	1	multi-exon	FALSE	canonical	1	129142	junction_1	15385.058530925386	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	167	1738	15.0	-56	True	AATAAA	-28
PB.7963.3	chr3	+	1945	4	full-splice_match	BTD	ENST00000449107.6	2083	4	375	-237	0	0	multi-exon	FALSE	canonical	1	17451	junction_1	66052.72658683785	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	16	1614	20.0	-56	True	AATAAA	-27
PB.7963.1	chr3	+	3882	4	full-splice_match	BTD	ENST00000643237.1	4248	4	358	8	0	-8	multi-exon	FALSE	canonical	1	129142	junction_1	15385.058530925386	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	107	1738	55.0	-56	True	AATAAA	-13
PB.870.5	chr1	-	1900	5	full-splice_match	DEDD	ENST00000545495.5	2329	5	74	355	-26	-355	multi-exon	FALSE	canonical	1	10919	junction_4	203159.525652103	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	129	1085	5.0	-16	True	AATAAA	-14
PB.870.4	chr1	-	1980	6	full-splice_match	DEDD	ENST00000458050.6	2300	6	-35	355	-25	-355	multi-exon	FALSE	canonical	1	48852	junction_5	167886.7314630909	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	209	1165	5.0	279	False	AATAAA	-14
PB.10864.17	chr7	-	3217	15	novel_in_catalog	WDR91	novel	4500	15	NA	NA	0	540	combination_of_known_junctions	FALSE	canonical	1	3027	junction_10	58555.91574311946	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	794	2308	40.0	-17	True	NA	NA
PB.8056.2	chr3	+	3440	6	novel_in_catalog	ZKSCAN7	novel	2791	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	9667	junction_5	5573.405336058019	NA	0	NA	TRUE	NA	NA	NA	B	coding	753	2262	397	2658	30.0	11	True	AATAAA	-17
PB.10864.16	chr7	-	3247	15	novel_in_catalog	WDR91	novel	4500	15	NA	NA	16	540	combination_of_known_junctions	FALSE	canonical	1	11660	junction_5	58018.47804266979	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	17	2338	40.0	-1	True	NA	NA
PB.3457.40	chr14	+	4388	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-3	138	combination_of_known_junctions	FALSE	canonical	1	39997	junction_41	424932.87703512295	NA	0	NA	TRUE	NA	NA	NA	C	coding	1300	3903	135	4037	50.0	9	True	AATAAA	-11
PB.10864.15	chr7	-	5933	13	novel_in_catalog	WDR91	novel	4500	15	NA	NA	9	540	intron_retention	FALSE	canonical	1	112643	junction_7	37935.51713836989	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	2247	3539	40.0	-8	True	NA	NA
PB.1584.1	chr10	-	1868	5	novel_not_in_catalog	PYROXD2	novel	2865	15	NA	NA	-8	11512	any annotated donor/acceptor	FALSE	canonical	1	9914	junction_1	26898.090270268258	NA	0	NA	TRUE	NA	NA	NA	B	coding	128	387	58	444	35.0	5704	False	AATAAA	-14
PB.5873.3	chr19	-	4063	4	full-splice_match	ZNF626	ENST00000291750.6	1123	4	25	-2965	22	2965	multi-exon	FALSE	canonical	1	89924	junction_3	9032.143353355037	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.1584.2	chr10	-	3655	1	novel_in_catalog	PYROXD2	novel	2028	16	NA	NA	-4	2440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	135	408	28	435	75.0	-2	True	NA	NA
PB.9122.1	chr5	-	7297	23	novel_not_in_catalog	SLC12A7	novel	5280	24	NA	NA	-29	-8	intron_retention	TRUE	non_canonical	0	0	junction_14	85323.53952641741	NA	8	NA	TRUE	NA	NA	NA	C	coding	456	1371	74	1444	25.0	-2	True	AATAAA	-17
PB.9122.2	chr5	-	5547	24	novel_in_catalog	SLC12A7	novel	5280	24	NA	NA	-29	-9	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_14	82833.49403996891	NA	4	NA	TRUE	NA	NA	NA	C	coding	616	1851	74	1924	30.0	-2	True	AATAAA	-16
PB.12334.1	chrX	-	1337	12	novel_in_catalog	IDH3G	novel	1712	12	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_10	387923.4023804568	NA	2	1	TRUE	NA	NA	NA	B	coding	335	1008	225	1232	5.0	-10	True	AATAAA	-16
PB.2245.15	chr11	+	5291	1	novel_in_catalog	BIRC3	novel	4342	10	NA	NA	3	535	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	3	True	NA	NA
PB.12334.3	chrX	-	5467	9	incomplete-splice_match	IDH3G	ENST00000427365.6	1526	11	-15	-29	10	-2	intron_retention	FALSE	canonical	1	877750	junction_8	171406.6471190933	NA	0	NA	TRUE	NA	NA	NA	B	coding	350	1053	4035	5087	10.0	3	True	AATAAA	-14
PB.2245.10	chr11	+	4045	6	incomplete-splice_match	BIRC3	ENST00000263464.7	5197	9	-11	6533	0	147	3prime_fragment	FALSE	canonical	1	176072	junction_1	159916.6070082779	NA	3	NA	TRUE	NA	NA	NA	C	coding	428	1284	2762	4045	50.0	0	True	NA	NA
PB.2245.11	chr11	+	2682	10	novel_not_in_catalog	BIRC3	novel	4342	10	NA	NA	0	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	192932.21615881217	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	243	2057	15.0	0	True	AATAAA	-13
PB.2245.12	chr11	+	1985	2	incomplete-splice_match	BIRC3	ENST00000263464.7	5197	9	-11	14001	0	1491	3prime_fragment	FALSE	canonical	1	176072	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.2245.13	chr11	+	1665	8	novel_in_catalog	BIRC3	novel	4342	10	NA	NA	0	-17	no_combination_of_known_junctions	FALSE	canonical	1	11412	junction_1	191882.8127562896	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	361	1050	45.0	0	True	AATAAA	-3
PB.8725.3	chr4	+	2097	23	novel_not_in_catalog	TBC1D19	novel	567	4	NA	NA	0	14646	any annotated donor/acceptor	FALSE	canonical	1	6804	junction_22	32190.355524013656	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	111	1766	50.0	0	True	NA	NA
PB.7379.4	chr20	+	2218	5	novel_in_catalog	VAPB	novel	7936	6	NA	NA	77	-11	no_combination_of_known_junctions	FALSE	canonical	1	5624	junction_3	246518.63233435317	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	262	912	40.0	-32	True	AATAAA	-6
PB.3741.4	chr15	+	2626	14	novel_in_catalog	ARHGAP11B	novel	1126	3	NA	NA	-538	129447	no_combination_of_known_junctions	FALSE	canonical	1	180	junction_1	27998.19440374365	NA	1	NA	TRUE	NA	NA	NA	B	coding	267	804	684	1487	50.0	-1	True	NA	NA
PB.8773.14	chr4	+	2319	12	novel_in_catalog	DCUN1D4	novel	2293	9	NA	NA	0	518	combination_of_known_junctions	FALSE	canonical	1	4126	junction_6	116858.03698151682	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	91	582	10.0	0	True	AATAAA	-23
PB.3741.1	chr15	+	2757	15	novel_in_catalog	ARHGAP11B	novel	1126	3	NA	NA	-590	129447	no_combination_of_known_junctions	TRUE	canonical	1	180	junction_1	28160.212782562274	NA	5	1	TRUE	NA	NA	NA	B	coding	267	804	736	1539	50.0	-53	False	NA	NA
PB.3741.2	chr15	+	2897	14	novel_in_catalog	ARHGAP11B	novel	1126	3	NA	NA	-588	129668	no_combination_of_known_junctions	FALSE	canonical	1	180	junction_1	27998.19440374365	NA	0	NA	TRUE	NA	NA	NA	B	coding	267	804	734	1537	10.0	-51	False	NA	NA
PB.3741.3	chr15	+	3944	11	novel_not_in_catalog	ARHGAP11B	novel	1126	3	NA	NA	-558	10723	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	29105.42064358459	NA	2	NA	TRUE	NA	NA	NA	B	coding	192	579	868	1446	30.0	-21	True	AATAAA	-24
PB.10301.9	chr6	+	3438	18	novel_not_in_catalog	SNX9	novel	542	6	NA	NA	-16	-2327	any annotated donor/acceptor	FALSE	canonical	1	1752	junction_17	150280.7900868275	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	188	2086	25.0	2	True	AATAAA	-24
PB.7213.1	chr20	+	2663	14	incomplete-splice_match	PYGB	ENST00000216962.8	4134	20	-22	13000	-22	-11454	3prime_fragment	TRUE	canonical	1	657567	junction_1	187661.04070229243	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	133	2013	40.0	-52	True	NA	NA
PB.10301.7	chr6	+	3398	18	full-splice_match	SNX9	ENST00000392185.7	4198	18	-17	817	-17	-817	multi-exon	FALSE	canonical	1	182032	junction_1	107839.13856677237	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	189	1976	60.0	1	True	AATAAA	-9
PB.10301.6	chr6	+	3416	18	novel_not_in_catalog	SNX9	novel	542	6	NA	NA	-19	-2333	any annotated donor/acceptor	FALSE	canonical	1	3931	junction_17	149924.09484334115	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	191	1966	35.0	-1	True	AATAAA	-18
PB.10301.5	chr6	+	2377	19	novel_not_in_catalog	SNX9	novel	542	6	NA	NA	-23	-2154	any annotated donor/acceptor	FALSE	canonical	1	2261	junction_4	174436.01401178885	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	1105	2292	80.0	-5	True	NA	NA
PB.10301.4	chr6	+	2452	18	full-splice_match	SNX9	ENST00000392185.7	4198	18	-33	1779	-33	-1779	multi-exon	FALSE	canonical	1	182032	junction_1	107839.13856677237	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	205	1992	25.0	-15	True	AATAAA	-18
PB.10301.3	chr6	+	3560	18	full-splice_match	SNX9	ENST00000392185.7	4198	18	91	547	91	-547	multi-exon	FALSE	canonical	1	182032	junction_1	107839.13856677237	NA	2	NA	TRUE	NA	NA	NA	C	coding	595	1788	81	1868	30.0	-4524	False	AATAAA	-44
PB.7213.2	chr20	+	3426	21	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	-18	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	273193.1178465656	NA	8	1	TRUE	NA	NA	NA	C	coding	843	2532	129	2660	15.0	-48	True	ATTAAA	-23
PB.10301.1	chr6	+	2063	18	full-splice_match	SNX9	ENST00000392185.7	4198	18	-17	2152	-17	-2152	multi-exon	FALSE	canonical	1	182032	junction_1	107839.13856677237	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	189	1976	75.0	1	True	NA	NA
PB.10808.10	chr7	-	2478	10	novel_not_in_catalog	FAM3C	novel	2508	10	NA	NA	300	-40	any annotated donor/acceptor	FALSE	canonical	1	157	junction_7	10580.124521426433	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	225	908	70.0	383	False	AATAAA	-15
PB.10808.13	chr7	-	2340	10	novel_not_in_catalog	FAM3C	novel	2508	10	NA	NA	-6	-195	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	10613.292629737694	NA	4	2	TRUE	NA	NA	NA	C	coding	227	684	242	925	20.0	-33	True	AATAAA	-21
PB.7213.3	chr20	+	4035	19	novel_in_catalog	PYGB	novel	4134	20	NA	NA	-6	-3	no_combination_of_known_junctions	FALSE	canonical	1	6818	junction_1	278630.83362982277	NA	1	NA	TRUE	NA	NA	NA	C	coding	809	2430	117	2546	15.0	-36	True	ATTAAA	-23
PB.2890.21	chr12	-	2162	14	novel_in_catalog	GIT2	novel	5466	20	NA	NA	-19	-2	no_combination_of_known_junctions	FALSE	canonical	1	5813	junction_3	136303.69177490188	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	100	1107	10.0	-1	True	AATAAA	-15
PB.2890.20	chr12	-	2168	14	full-splice_match	GIT2	ENST00000320063.10	2094	14	-76	2	1	-2	multi-exon	FALSE	canonical	1	9424	junction_1	128725.45928714487	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	144	1409	10.0	0	True	AATAAA	-15
PB.2890.23	chr12	-	2188	9	incomplete-splice_match	GIT2	ENST00000551455.5	2014	14	8	13601	3	-2644	3prime_fragment	FALSE	canonical	1	178742	junction_8	109882.90469510885	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	142	993	0.0	2	True	AATAAA	-19
PB.2890.22	chr12	-	1635	15	full-splice_match	GIT2	ENST00000547815.5	2989	15	-72	1426	0	-686	multi-exon	FALSE	canonical	1	107959	junction_1	108026.18179187215	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	145	1560	25.0	-1	True	AATAAA	-19
PB.10808.19	chr7	-	2176	8	incomplete-splice_match	FAM3C	ENST00000359943.7	2508	10	44	9653	18	1552	3prime_fragment	FALSE	canonical	1	157	junction_5	1511.5088825543885	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	171	719	15.0	17	True	NA	NA
PB.10808.18	chr7	-	1324	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	24	1160	-2	372	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	191	874	20.0	-3	True	ATTAAA	-13
PB.8157.1	chr3	-	2834	3	full-splice_match	DUSP7	ENST00000495880.1	3340	3	502	4	117	-4	multi-exon	FALSE	canonical	1	191211	junction_2	11875.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	73	222	721	942	35.0	9063	False	AATAAA	-16
PB.8602.2	chr3	+	2058	3	incomplete-splice_match	HES1	ENST00000232424.3	1578	4	0	154	0	-154	intron_retention	FALSE	canonical	1	810891	junction_1	59958.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	1222	1713	80.0	-3	True	NA	NA
PB.11978.6	chrX	+	4165	15	full-splice_match	MOSPD2	ENST00000380492.7	4163	15	-9	7	-9	-7	multi-exon	FALSE	canonical	1	109851	junction_11	16593.311625901737	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	98	1654	40.0	-29	True	AATAAA	-11
PB.11978.7	chrX	+	3840	15	novel_not_in_catalog	MOSPD2	novel	4163	15	NA	NA	-9	-198	any annotated donor/acceptor	FALSE	canonical	1	3383	junction_14	37129.69993042591	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	98	1576	60.0	-29	True	NA	NA
PB.11978.4	chrX	+	3192	15	full-splice_match	MOSPD2	ENST00000380492.7	4163	15	-20	991	-20	-420	multi-exon	FALSE	canonical	1	109851	junction_11	16593.311625901737	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	109	1665	10.0	-40	True	AATAAA	-14
PB.11978.5	chrX	+	2691	15	full-splice_match	MOSPD2	ENST00000380492.7	4163	15	16	1456	2	869	multi-exon	FALSE	canonical	1	109851	junction_11	16593.311625901737	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	73	1629	90.0	-4	True	NA	NA
PB.11978.2	chrX	+	2627	15	novel_not_in_catalog	MOSPD2	novel	4163	15	NA	NA	-54	869	any annotated donor/acceptor	FALSE	canonical	1	3383	junction_14	37129.69993042591	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	143	1621	90.0	-120	False	NA	NA
PB.11978.3	chrX	+	1890	15	full-splice_match	MOSPD2	ENST00000380492.7	4163	15	-53	2326	-53	-1	multi-exon	FALSE	canonical	1	109851	junction_11	16593.311625901737	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	142	1698	45.0	-119	False	AATAAA	-32
PB.11978.1	chrX	+	3975	15	full-splice_match	MOSPD2	ENST00000380492.7	4163	15	-10	198	-10	-198	multi-exon	FALSE	canonical	1	109851	junction_11	16593.311625901737	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	99	1655	60.0	-30	True	NA	NA
PB.11978.8	chrX	+	3581	15	full-splice_match	MOSPD2	ENST00000380492.7	4163	15	15	567	1	4	multi-exon	FALSE	canonical	1	109851	junction_11	16593.311625901737	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	74	1630	20.0	-5	True	TATAAA	-21
PB.11978.9	chrX	+	5113	14	novel_in_catalog	MOSPD2	novel	4163	15	NA	NA	9	869	intron_retention	FALSE	canonical	1	109851	junction_10	16316.276957790145	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	2936	4051	90.0	3	True	NA	NA
PB.8244.3	chr3	-	4380	3	full-splice_match	CGGBP1	ENST00000309534.10	4495	3	43	72	43	-4	multi-exon	FALSE	canonical	1	516623	junction_1	26365.0	NA	28	NA	TRUE	NA	NA	NA	C	coding	167	504	420	923	50.0	62	False	AATAAA	-19
PB.8244.2	chr3	-	4472	4	full-splice_match	CGGBP1	ENST00000482016.5	1147	4	73	-3398	-50	-4	multi-exon	FALSE	canonical	1	83901	junction_1	227772.1933340903	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	512	1015	50.0	-41	True	AATAAA	-19
PB.9604.2	chr5	+	2172	2	full-splice_match	MIR3142HG	ENST00000517927.1	2301	2	-28	157	-28	-157	multi-exon	FALSE	canonical	1	35837	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	707	1099	35.0	-12	True	NA	NA
PB.8244.7	chr3	-	4600	4	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	264	-4	any annotated donor/acceptor	FALSE	canonical	1	8231	junction_3	36798.486475518104	NA	5	NA	TRUE	NA	NA	NA	C	coding	167	504	640	1143	50.0	-15	True	AATAAA	-19
PB.9604.1	chr5	+	2333	2	full-splice_match	MIR3142HG	ENST00000517927.1	2301	2	-29	-3	-29	3	multi-exon	FALSE	canonical	1	35837	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	708	1100	35.0	-13	True	NA	NA
PB.8244.9	chr3	-	4489	4	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	-548	-4	any annotated donor/acceptor	FALSE	canonical	1	1106	junction_3	239341.0216857017	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	529	1032	50.0	-564	False	AATAAA	-19
PB.8244.8	chr3	-	4271	3	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	491	-4	any annotated donor/acceptor	FALSE	canonical	1	8231	junction_2	254196.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	311	814	50.0	613	False	AATAAA	-19
PB.8147.1	chr3	+	4948	24	novel_not_in_catalog	RAD54L2	novel	4782	22	NA	NA	-2458	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_2	40705.31952933028	NA	0	NA	TRUE	NA	NA	NA	B	coding	1467	4404	371	4774	100.0	-33	True	NA	NA
PB.8147.3	chr3	+	4916	23	novel_not_in_catalog	RAD54L2	novel	4782	22	NA	NA	-2451	-1	any annotated donor/acceptor	FALSE	canonical	1	7426	junction_1	31639.859671415412	NA	0	NA	TRUE	NA	NA	NA	B	coding	1467	4404	340	4743	95.0	-26	True	NA	NA
PB.8147.2	chr3	+	5101	24	novel_not_in_catalog	RAD54L2	novel	4782	22	NA	NA	-2452	1	any annotated donor/acceptor	FALSE	canonical	1	3789	junction_2	40308.04901203852	NA	0	NA	TRUE	NA	NA	NA	B	coding	1467	4404	523	4926	100.0	-27	True	NA	NA
PB.8147.5	chr3	+	4843	22	novel_not_in_catalog	RAD54L2	novel	4782	22	NA	NA	-2439	0	any annotated donor/acceptor	FALSE	canonical	1	15541	junction_1	28816.395101154663	NA	0	NA	TRUE	NA	NA	NA	B	coding	1467	4404	266	4669	100.0	-14	True	NA	NA
PB.7144.1	chr20	+	1024	4	full-splice_match	MRPS26	ENST00000380325.3	1127	4	103	0	103	0	multi-exon	FALSE	canonical	1	718991	junction_1	122568.14344228638	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	22	639	20.0	-4	True	NA	NA
PB.8147.7	chr3	+	4933	23	novel_not_in_catalog	RAD54L2	novel	4782	22	NA	NA	-2406	0	any annotated donor/acceptor	FALSE	canonical	1	866	junction_13	40719.33283714849	NA	27	1	TRUE	NA	NA	NA	B	coding	1508	4527	233	4759	100.0	19	True	NA	NA
PB.8147.6	chr3	+	2321	1	intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	19	60	253	312	100.0	1	True	NA	NA
PB.7901.1	chr3	+	2682	2	novel_in_catalog	CHL1	novel	8023	28	NA	NA	77	2002	no_combination_of_known_junctions	FALSE	canonical	1	466	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	27	True	NA	NA
PB.9935.1	chr6	-	2639	1	novel_in_catalog	SMIM29	novel	1297	5	NA	NA	10	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	167	504	2014	2517	25.0	-25	True	AATAAA	-18
PB.7692.1	chr22	-	2560	18	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	1	4668	junction_17	180037.89099210704	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	208	2139	15.0	-14	True	AATAAA	-38
PB.1169.2	chr1	+	2554	14	novel_in_catalog	PSEN2	novel	734	4	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	1515	junction_4	72574.44865424371	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	585	2030	20.0	-44	False	AATAAA	-25
PB.10878.7	chr7	+	2930	10	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	-26	-1010	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	431367.5898119524	NA	8	NA	TRUE	NA	NA	NA	C	coding	335	1008	381	1388	35.0	-74	True	AGTAAA	-16
PB.11768.14	chr9	+	3404	7	full-splice_match	MRRF	ENST00000344641.7	9826	7	257	6165	-1	1717	multi-exon	FALSE	canonical	1	80395	junction_1	36995.207292071405	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	55	843	50.0	-3	True	AATAAA	-24
PB.2553.12	chr12	+	2273	14	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	1	43921	junction_12	269936.630559512	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	106	1578	15.0	-1	True	ATTAAA	-13
PB.2553.13	chr12	+	1729	11	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	316	junction_4	285653.66127595847	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	483	1283	35.0	-1	True	AATAAA	-20
PB.2553.10	chr12	+	3582	14	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	43921	junction_12	269936.630559512	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	108	1580	15.0	-3	True	AATAAA	-17
PB.2553.11	chr12	+	3433	13	full-splice_match	PPHLN1	ENST00000619544.4	1449	13	17	-2001	0	1	multi-exon	FALSE	canonical	1	43781	junction_11	279765.45572973567	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	107	1432	15.0	-2	True	AATAAA	-16
PB.2553.16	chr12	+	4921	1	full-splice_match	PPHLN1	ENST00000624028.1	5975	1	1051	3	1051	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	133	402	2250	2651	15.0	-4678	False	AATAAA	-17
PB.594.2	chr1	+	2489	12	novel_in_catalog	ATXN7L2	novel	3022	12	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	15151	junction_10	29729.411657829038	NA	2	NA	TRUE	NA	NA	NA	B	coding	763	2292	15	2306	15.0	-19	True	AAAAAG	-17
PB.2553.14	chr12	+	1680	11	full-splice_match	PPHLN1	ENST00000395580.7	1693	11	22	-9	0	4	multi-exon	FALSE	canonical	1	160942	junction_1	237109.97310994743	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	106	1230	35.0	-1	True	AATAAA	-24
PB.2553.15	chr12	+	1637	10	full-splice_match	PPHLN1	ENST00000358314.11	1643	10	10	-4	0	4	multi-exon	FALSE	canonical	1	357767	junction_2	169275.79873583323	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	84	1187	35.0	-1	True	AATAAA	-24
PB.8116.13	chr3	+	5526	3	novel_not_in_catalog	DAG1	novel	5576	3	NA	NA	228	-2	any annotated donor/acceptor	FALSE	canonical	1	6735	junction_1	251963.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	431	3112	20.0	238	False	AATAAA	-18
PB.7692.5	chr22	-	2964	22	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	720	junction_20	201532.40249810347	NA	2	NA	TRUE	NA	NA	NA	C	coding	757	2274	292	2565	30.0	0	True	AATAAA	-16
PB.8116.11	chr3	+	5526	4	full-splice_match	DAG1	ENST00000541308.5	5676	4	143	7	-2	-4	multi-exon	FALSE	canonical	1	1861	junction_1	236721.72326782532	NA	4	NA	TRUE	NA	NA	NA	C	coding	893	2682	433	3114	20.0	-14	True	AATAAA	-16
PB.8116.10	chr3	+	5437	4	novel_in_catalog	DAG1	novel	5576	3	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	14447	junction_1	233283.96468729308	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	342	3023	20.0	-22	True	AATAAA	-18
PB.7901.6	chr3	+	5048	26	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	5459	junction_1	24472.75442269627	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	396	3911	30.0	0	True	AATAAA	-14
PB.8433.11	chr3	+	4602	8	novel_not_in_catalog	SLC25A36	novel	4638	7	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	146011.36044003913	NA	4	1	TRUE	NA	NA	NA	C	coding	311	936	236	1171	25.0	-23	True	ATTAAA	-10
PB.11144.3	chr8	+	5045	8	full-splice_match	UBXN2B	ENST00000399598.6	5068	8	89	-66	-6	66	multi-exon	TRUE	canonical	1	16716	junction_6	55555.48224201512	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	34	1029	25.0	-15	True	AATAGA	-14
PB.7534.2	chr21	+	2981	14	novel_in_catalog	ABCG1	novel	3119	16	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	6061	junction_4	52079.61249924011	NA	1	NA	TRUE	NA	NA	NA	C	coding	661	1986	147	2132	25.0	-23	True	AATATA	-16
PB.8276.8	chr3	+	3363	9	novel_not_in_catalog	NXPE3	novel	797	5	NA	NA	13	0	intron_retention	FALSE	canonical	1	6535	junction_3	71465.09884683222	NA	2	1	TRUE	NA	NA	NA	C	coding	559	1680	813	2492	10.0	4	True	TATAAA	-22
PB.8276.9	chr3	+	3463	9	novel_in_catalog	NXPE3	novel	797	5	NA	NA	-12	107	intron_retention	FALSE	canonical	1	9473	junction_1	66046.71364837163	NA	3	1	TRUE	NA	NA	NA	C	coding	559	1680	806	2485	5.0	7	True	ACTAAA	-9
PB.11144.7	chr8	+	5160	8	full-splice_match	UBXN2B	ENST00000399598.6	5068	8	111	-203	-6	203	multi-exon	FALSE	canonical	1	16716	junction_6	55555.48224201512	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	12	1007	20.0	7	True	AATAAA	-15
PB.7692.7	chr22	-	2894	21	novel_in_catalog	ASCC2	novel	2793	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	15095	junction_19	181562.52060033617	NA	2	NA	TRUE	NA	NA	NA	C	coding	757	2274	222	2495	30.0	-4	True	AATAAA	-16
PB.11144.5	chr8	+	5041	9	novel_in_catalog	UBXN2B	novel	5068	8	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	16716	junction_7	56991.80834764217	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	685	1092	35.0	-5	True	AATAAA	-21
PB.7534.3	chr21	+	2937	14	novel_in_catalog	ABCG1	novel	3119	16	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	6061	junction_4	50324.90349788071	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	138	2087	30.0	-14	True	AATATA	-17
PB.8276.2	chr3	+	2978	8	full-splice_match	NXPE3	ENST00000273347.9	3941	8	-42	1005	-14	-205	multi-exon	FALSE	canonical	1	26118	junction_3	55547.50044487573	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	635	2314	20.0	-23	True	TATAAA	-18
PB.8276.3	chr3	+	3169	8	full-splice_match	NXPE3	ENST00000273347.9	3941	8	-27	799	1	1	multi-exon	FALSE	canonical	1	26118	junction_3	55547.50044487573	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	620	2299	10.0	-8	True	TATAAA	-21
PB.7692.6	chr22	-	2849	21	full-splice_match	ASCC2	ENST00000397771.6	2823	21	2	-28	0	-1	multi-exon	FALSE	canonical	1	135127	junction_19	168209.13981216212	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	177	2450	30.0	-6	True	AATAAA	-16
PB.8276.6	chr3	+	2397	6	novel_not_in_catalog	NXPE3	novel	797	5	NA	NA	10	5723	any annotated donor/acceptor	FALSE	canonical	1	9706	junction_5	68274.26629001589	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	611	1555	10.0	1	True	AATAAA	-34
PB.8276.7	chr3	+	3521	9	novel_not_in_catalog	NXPE3	novel	797	5	NA	NA	13	111	intron_retention	FALSE	canonical	1	6629	junction_1	66532.77957142629	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	860	2539	0.0	4	True	ACTAAA	-13
PB.8276.4	chr3	+	3946	8	full-splice_match	NXPE3	ENST00000273347.9	3941	8	-18	13	10	-13	multi-exon	FALSE	canonical	1	26118	junction_3	55547.50044487573	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	611	2290	70.0	1	True	NA	NA
PB.7315.10	chr20	+	2060	11	novel_in_catalog	PIGT	novel	2245	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	24254	junction_6	527716.1269550988	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	880	1644	0.0	1	True	AATAAA	-18
PB.1504.9	chr10	+	1314	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	113	701	113	-701	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	81	1118	45.0	25	True	AATAAA	-18
PB.1504.8	chr10	+	2156	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	112	-140	112	140	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	82	1119	35.0	24	True	AAAAAG	-18
PB.7534.1	chr21	+	2969	15	full-splice_match	ABCG1	ENST00000398449.7	2998	15	27	2	27	-2	multi-exon	FALSE	canonical	1	62093	junction_1	35952.80105043902	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	119	2119	30.0	5	True	AATATA	-17
PB.6534.3	chr2	-	2662	10	novel_in_catalog	C2orf42	novel	2581	10	NA	NA	-30	-7	combination_of_known_junctions	FALSE	canonical	1	5465	junction_9	29183.204054539467	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	469	2193	25.0	-1	True	AATAAA	-22
PB.1504.1	chr10	+	1473	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	107	548	107	-548	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	87	1124	15.0	19	True	ACTAAA	-15
PB.1504.3	chr10	+	2064	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	69	-5	69	5	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	125	1162	30.0	0	True	AATACA	-22
PB.7901.7	chr3	+	3449	10	incomplete-splice_match	CHL1	ENST00000256509.6	8023	28	184	57916	-3	9555	3prime_fragment	FALSE	canonical	1	19904	junction_1	16127.656473689329	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	459	1607	20.0	-3	True	AATAAA	-24
PB.1504.5	chr10	+	3637	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	88	-1597	88	1597	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	106	1143	20.0	0	True	AATAGA	-32
PB.1504.4	chr10	+	1845	8	novel_in_catalog	GHITM	novel	2128	9	NA	NA	69	-72	no_combination_of_known_junctions	FALSE	canonical	1	3762	junction_4	1063277.5968833927	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	490	1020	20.0	0	True	AATACA	-15
PB.1504.7	chr10	+	3513	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	89	-1474	89	1474	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	105	1142	75.0	1	True	NA	NA
PB.1504.6	chr10	+	3935	9	full-splice_match	GHITM	ENST00000372134.5	2128	9	89	-1896	89	1896	multi-exon	FALSE	canonical	1	2436030	junction_1	354830.8142298242	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	105	1142	40.0	1	True	AATAAA	-22
PB.6910.66	chr2	-	2687	24	full-splice_match	STAT1	ENST00000392323.6	2723	24	36	0	7	0	multi-exon	FALSE	canonical	1	32434	junction_21	483829.15754109557	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	377	2521	85.0	-2	True	NA	NA
PB.6910.67	chr2	-	2473	23	novel_in_catalog	STAT1	novel	4310	25	NA	NA	67	0	no_combination_of_known_junctions	FALSE	canonical	1	79	junction_22	490440.8556617688	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2145	163	2307	85.0	6916	False	NA	NA
PB.6910.64	chr2	-	3551	22	novel_in_catalog	STAT1	novel	4310	25	NA	NA	12	0	intron_retention	FALSE	canonical	1	957747	junction_21	236469.63567174037	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	295	2400	85.0	3	True	NA	NA
PB.6910.65	chr2	-	2599	23	full-splice_match	STAT1	ENST00000392322.7	2716	23	12	105	12	0	multi-exon	FALSE	canonical	1	957747	junction_22	256526.92373309852	NA	19	4	TRUE	NA	NA	NA	C	coding	712	2139	295	2433	85.0	3	True	NA	NA
PB.6910.63	chr2	-	3970	22	novel_in_catalog	STAT1	novel	4310	25	NA	NA	10	0	intron_retention	FALSE	canonical	1	957747	junction_21	251486.31401821278	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	2269	3804	85.0	1	True	NA	NA
PB.6910.68	chr2	-	2450	22	novel_in_catalog	STAT1	novel	4310	25	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	21618	junction_21	394182.9747910655	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	146	2284	85.0	-2	True	NA	NA
PB.3388.1	chr14	-	1559	6	full-splice_match	NFKBIA	ENST00000216797.9	1558	6	-6	5	-3	-5	multi-exon	FALSE	canonical	1	2046532	junction_5	352709.0589319191	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	109	1062	35.0	-4	True	ATTAAA	-12
PB.3388.3	chr14	-	1123	6	full-splice_match	NFKBIA	ENST00000216797.9	1558	6	-4	439	-1	-24	multi-exon	FALSE	canonical	1	2046532	junction_5	352709.0589319191	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	107	1060	85.0	-2	True	AAAAAG	-13
PB.3388.2	chr14	-	1519	4	novel_in_catalog	NFKBIA	novel	1558	6	NA	NA	0	-24	intron_retention	FALSE	canonical	1	2046532	junction_3	363423.2173219904	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	106	699	85.0	-1	True	AAAAAG	-13
PB.3388.5	chr14	-	1847	3	novel_in_catalog	NFKBIA	novel	1558	6	NA	NA	0	-25	intron_retention	FALSE	canonical	1	2046532	junction_2	426366.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	106	474	80.0	-1	True	AAAAAG	-12
PB.3388.4	chr14	-	2182	2	full-splice_match	NFKBIA	ENST00000555629.1	599	2	-1	-1582	-1	-24	multi-exon	FALSE	canonical	1	2046532	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	122	369	107	475	85.0	-2	True	AAAAAG	-13
PB.2196.11	chr11	-	2998	5	full-splice_match	RAB30	ENST00000527633.5	792	5	-24	-2182	-12	-707	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	203	808	25.0	44	False	AATAAA	-21
PB.7901.4	chr3	+	5144	27	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	19904	junction_1	23552.997307626832	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	488	4003	30.0	-12	True	AATAAA	-18
PB.2196.13	chr11	-	2696	5	full-splice_match	RAB30	ENST00000527633.5	792	5	17	-1921	-8	-968	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	162	767	65.0	-9	True	AAGAAA	-10
PB.2196.12	chr11	-	3105	6	full-splice_match	RAB30	ENST00000533486.5	9929	6	-23	6847	7	-712	multi-exon	FALSE	canonical	1	7761	junction_5	60440.94800844871	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	315	920	30.0	33	False	AATAAA	-16
PB.2196.15	chr11	-	1620	5	full-splice_match	RAB30	ENST00000527633.5	792	5	30	-858	4	491	multi-exon	FALSE	canonical	1	67603	junction_4	29935.253584820355	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	149	754	80.0	4	True	AATGAA	-10
PB.940.9	chr1	+	2567	12	full-splice_match	KLHL20	ENST00000209884.4	3421	12	-3	857	-3	332	multi-exon	FALSE	canonical	1	76332	junction_1	42319.757234809644	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	140	1969	30.0	0	True	AATAAA	-18
PB.940.8	chr1	+	2169	12	full-splice_match	KLHL20	ENST00000209884.4	3421	12	56	1196	56	-7	multi-exon	FALSE	canonical	1	76332	junction_1	42319.757234809644	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	81	1910	85.0	-50	False	NA	NA
PB.92.4	chr1	+	2844	6	novel_not_in_catalog	FBXO44	novel	1896	5	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	6664	junction_5	151836.36614856138	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	107	499	25.0	0	True	NA	NA
PB.940.3	chr1	+	2834	12	novel_in_catalog	KLHL20	novel	450	4	NA	NA	10	-7	intron_retention	FALSE	canonical	1	56541	junction_1	46240.84471314429	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	746	2575	85.0	-30	True	NA	NA
PB.940.2	chr1	+	3593	13	novel_in_catalog	KLHL20	novel	450	4	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	23930	junction_1	58456.00913364967	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	312	2141	20.0	-40	True	AATAAA	-31
PB.940.1	chr1	+	3463	12	full-splice_match	KLHL20	ENST00000209884.4	3421	12	-45	3	-2	-3	multi-exon	TRUE	canonical	1	76332	junction_1	42319.757234809644	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	182	2011	20.0	-42	True	AATAAA	-31
PB.940.7	chr1	+	2957	12	novel_in_catalog	KLHL20	novel	450	4	NA	NA	85	234	intron_retention	FALSE	canonical	1	56541	junction_1	46240.84471314429	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	403	2457	95.0	-21	False	NA	NA
PB.940.6	chr1	+	2627	13	novel_in_catalog	KLHL20	novel	450	4	NA	NA	14	234	combination_of_known_junctions	FALSE	canonical	1	23930	junction_1	58456.00913364967	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	298	2127	95.0	-26	True	NA	NA
PB.940.5	chr1	+	2388	13	novel_in_catalog	KLHL20	novel	450	4	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	1	23930	junction_1	58456.00913364967	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	300	2129	85.0	-28	True	NA	NA
PB.940.4	chr1	+	2772	14	novel_not_in_catalog	KLHL20	novel	450	4	NA	NA	10	234	any annotated donor/acceptor	FALSE	canonical	1	75	junction_3	78184.27371462899	NA	16	1	TRUE	NA	NA	NA	C	coding	591	1776	497	2272	95.0	-30	True	NA	NA
PB.4495.1	chr16	-	2400	14	full-splice_match	RANBP10	ENST00000602677.5	2374	14	0	-26	0	0	multi-exon	FALSE	canonical	1	34011	junction_4	58730.950067829	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	25	1977	65.0	-1	True	NA	NA
PB.4495.3	chr16	-	2789	4	incomplete-splice_match	RANBP10	ENST00000602887.1	683	6	-41	6445	1	-6445	3prime_fragment	FALSE	canonical	1	108304	junction_2	16128.802070278569	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	24	647	85.0	0	True	NA	NA
PB.4495.2	chr16	-	2328	14	full-splice_match	RANBP10	ENST00000317506.7	5341	14	74	2939	-18	0	multi-exon	FALSE	canonical	1	56894	junction_9	52664.1237106725	NA	2	NA	TRUE	NA	NA	NA	C	coding	620	1863	43	1905	65.0	-19	False	NA	NA
PB.10989.2	chr8	-	3269	13	novel_not_in_catalog	LONRF1	novel	3594	12	NA	NA	-14	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	65612.76483080907	NA	37	3	TRUE	NA	NA	NA	B	coding	661	1986	85	2070	30.0	0	True	AATAAA	-26
PB.92.5	chr1	+	2401	6	novel_in_catalog	FBXO44	novel	1896	5	NA	NA	-4	0	intron_retention	FALSE	canonical	1	21122	junction_1	169731.79037929222	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	479	871	10.0	0	True	NA	NA
PB.2350.9	chr11	+	3638	13	full-splice_match	PKNOX2	ENST00000298282.13	3687	13	46	3	0	-3	multi-exon	FALSE	canonical	1	24860	junction_1	13397.556021684204	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	265	1644	25.0	1	True	AGTAAA	-16
PB.2350.8	chr11	+	3708	14	novel_not_in_catalog	PKNOX2	novel	1709	12	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	24164.998599740156	NA	7	1	TRUE	NA	NA	NA	C	coding	459	1380	335	1714	25.0	0	True	AGTAAA	-16
PB.2350.5	chr11	+	2540	4	novel_in_catalog	PKNOX2	novel	1709	12	NA	NA	-2	1858	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_3	11493.322351116176	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	AATAAA	-21
PB.2350.4	chr11	+	3580	12	novel_in_catalog	PKNOX2	novel	1709	12	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	1951	junction_2	19058.324662957068	NA	3	NA	TRUE	NA	NA	NA	C	coding	459	1380	207	1586	25.0	0	True	AGTAAA	-16
PB.2350.7	chr11	+	3295	13	full-splice_match	PKNOX2	ENST00000298282.13	3687	13	46	346	0	-346	multi-exon	FALSE	canonical	1	24860	junction_1	13397.556021684204	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	265	1644	30.0	1	True	NA	NA
PB.2350.6	chr11	+	3612	12	novel_in_catalog	PKNOX2	novel	1709	12	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	4040	junction_1	17266.18551001106	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	239	1618	25.0	4	True	AGTAAA	-16
PB.2350.1	chr11	+	3475	13	full-splice_match	PKNOX2	ENST00000298282.13	3687	13	-18	230	1	-230	multi-exon	TRUE	canonical	1	24860	junction_1	13397.556021684204	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	329	1708	5.0	-334	False	GATAAA	-15
PB.2350.3	chr11	+	3805	14	novel_in_catalog	PKNOX2	novel	1709	12	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	912	junction_3	21520.793045922903	NA	2	NA	TRUE	NA	NA	NA	C	coding	459	1380	432	1811	25.0	-5	True	AGTAAA	-16
PB.2350.2	chr11	+	3043	3	full-splice_match	PKNOX2	ENST00000561399.5	521	3	-56	-2466	1	2466	multi-exon	FALSE	canonical	1	133	junction_2	12363.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-7	True	AATAAA	-20
PB.11452.2	chr9	-	2716	19	novel_in_catalog	GLDC	novel	3900	25	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	1	645	junction_18	20959.79495205282	NA	1	NA	TRUE	NA	NA	NA	B	coding	697	2094	76	2169	20.0	0	True	AATAAA	-14
PB.2233.9	chr11	+	2308	2	full-splice_match	SRSF8	ENST00000638426.1	560	2	-468	-1280	393	-856	multi-exon	FALSE	canonical	1	164974	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	34	105	382	486	95.0	-273	False	NA	NA
PB.2233.8	chr11	+	3743	1	full-splice_match	SRSF8	ENST00000587424.2	4028	1	285	0	285	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	34	105	490	594	15.0	-72	True	NA	NA
PB.11790.8	chr9	+	3287	18	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-7	0	intron_retention	FALSE	canonical	1	4700	junction_1	78937.99213372359	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2979	307	3285	80.0	-23	True	NA	NA
PB.11790.9	chr9	+	6832	26	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	58008	junction_1	62617.77022730847	NA	0	NA	TRUE	NA	NA	NA	C	coding	1460	4383	187	4569	5.0	-20	True	AATAAA	-20
PB.2233.5	chr11	+	2000	1	full-splice_match	SRSF8	ENST00000587424.2	4028	1	307	1721	307	415	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	34	105	468	572	35.0	-50	True	AATAAA	-16
PB.2233.4	chr11	+	2111	2	novel_not_in_catalog	SRSF8	novel	560	2	NA	NA	-282	33	any annotated donor/acceptor	FALSE	canonical	1	19550	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	282	849	313	1161	20.0	-948	False	AATAAA	-20
PB.2233.7	chr11	+	2088	1	full-splice_match	SRSF8	ENST00000587424.2	4028	1	-61	2001	-61	135	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	282	849	92	940	25.0	-50	True	AATATA	-18
PB.2233.6	chr11	+	1562	2	full-splice_match	SRSF8	ENST00000638426.1	560	2	-587	-415	274	415	multi-exon	FALSE	canonical	1	164974	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	34	105	501	605	35.0	-83	True	AATAAA	-16
PB.2233.1	chr11	+	1757	2	full-splice_match	SRSF8	ENST00000638426.1	560	2	-1165	-32	-304	32	multi-exon	FALSE	canonical	1	164974	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	335	1183	25.0	-970	False	AATAAA	-19
PB.11790.3	chr9	+	3165	18	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	29234	junction_2	83133.68664146969	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2916	248	3163	80.0	-32	True	NA	NA
PB.2233.3	chr11	+	2910	1	full-splice_match	SRSF8	ENST00000587424.2	4028	1	262	856	262	-856	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	34	105	513	617	95.0	-95	True	NA	NA
PB.2233.2	chr11	+	2716	2	novel_not_in_catalog	SRSF8	novel	560	2	NA	NA	360	-856	any annotated donor/acceptor	FALSE	canonical	1	19550	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	34	105	415	519	95.0	3	True	NA	NA
PB.2542.2	chr12	-	3424	20	full-splice_match	CPNE8	ENST00000331366.9	3489	20	-110	175	-110	-2	multi-exon	FALSE	canonical	1	90597	junction_17	17900.90572632331	NA	2	NA	TRUE	NA	NA	NA	C	coding	564	1695	208	1902	20.0	-1	True	ATTAAA	-14
PB.2542.3	chr12	-	2911	15	novel_not_in_catalog	CPNE8	novel	552	5	NA	NA	-15719	-2	any annotated donor/acceptor	FALSE	canonical	1	82	junction_14	33846.138459767535	NA	3	NA	TRUE	NA	NA	NA	C	coding	403	1212	178	1389	20.0	NA	False	ATTAAA	-14
PB.2542.1	chr12	-	3403	20	full-splice_match	CPNE8	ENST00000331366.9	3489	20	40	46	40	-46	multi-exon	FALSE	canonical	1	90597	junction_17	17900.90572632331	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	58	1752	75.0	-1	True	TTTAAA	-22
PB.2542.6	chr12	-	6262	11	novel_in_catalog	CPNE8	novel	3489	20	NA	NA	27	1470	intron_retention	FALSE	canonical	1	90597	junction_8	18980.198522670937	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	71	910	75.0	20	True	NA	NA
PB.2542.7	chr12	-	2598	11	novel_not_in_catalog	CPNE8	novel	3489	20	NA	NA	24	-10016	any annotated donor/acceptor	FALSE	canonical	1	6152	junction_1	39559.64917956174	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	74	799	10.0	17	True	AATAAA	-26
PB.2542.4	chr12	-	2954	20	full-splice_match	CPNE8	ENST00000331366.9	3489	20	26	509	26	-336	multi-exon	FALSE	canonical	1	90597	junction_17	17900.90572632331	NA	3	NA	TRUE	NA	NA	NA	C	coding	564	1695	72	1766	40.0	19	True	ATTAAA	-13
PB.2542.5	chr12	-	4358	16	novel_not_in_catalog	CPNE8	novel	3489	20	NA	NA	40	-19420	any annotated donor/acceptor	FALSE	canonical	1	84	junction_1	34632.65210456102	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	58	1284	30.0	-1	True	AATAAA	-18
PB.1485.1	chr10	-	920	7	full-splice_match	COMTD1	ENST00000372538.7	976	7	52	4	-23	-2	multi-exon	FALSE	canonical	1	133437	junction_6	62541.28918740181	NA	0	NA	TRUE	NA	NA	NA	A	coding	262	789	32	820	10.0	-3	True	AATAAA	-18
PB.8072.1	chr3	-	2772	2	full-splice_match	CCR1	ENST00000296140.3	2731	2	-39	-2	-39	2	multi-exon	FALSE	canonical	1	73671	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	166	1233	15.0	-2	True	NA	NA
PB.2542.8	chr12	-	2693	12	novel_not_in_catalog	CPNE8	novel	3489	20	NA	NA	19	-10024	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	57219.08918409879	NA	5	1	TRUE	NA	NA	NA	C	coding	219	660	243	902	35.0	12	True	AATAAA	-18
PB.2542.9	chr12	-	2280	1	novel_in_catalog	CPNE8	novel	1757	20	NA	NA	-497	-136796	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	79	240	80	319	95.0	-2	True	NA	NA
PB.9740.1	chr6	+	4595	1	incomplete-splice_match	TMEM170B	ENST00000379426.1	8362	3	40650	2	40650	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-7959	False	AATAAA	-18
PB.1129.18	chr1	-	2648	18	novel_in_catalog	EPRS	novel	5014	32	NA	NA	29	-4	combination_of_known_junctions	FALSE	canonical	1	1203	junction_5	244950.76238271935	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	114	2648	70.0	170	False	NA	NA
PB.3151.37	chr13	-	3204	16	full-splice_match	LCP1	ENST00000323076.6	3787	16	143	440	23	-440	multi-exon	FALSE	canonical	1	1963481	junction_15	685358.7765944167	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	96	1979	55.0	-7	True	NA	NA
PB.3151.36	chr13	-	3533	16	full-splice_match	LCP1	ENST00000323076.6	3787	16	129	125	9	-125	multi-exon	FALSE	canonical	1	1963481	junction_15	685358.7765944167	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	110	1993	30.0	-21	True	AATACA	-21
PB.3151.34	chr13	-	2608	13	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	29	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1086212.0423461264	NA	1	1	TRUE	NA	NA	NA	C	coding	478	1437	90	1526	15.0	-1	True	AATAAA	-12
PB.3151.33	chr13	-	5499	15	novel_in_catalog	LCP1	novel	3944	19	NA	NA	29	2	intron_retention	FALSE	canonical	1	1963481	junction_14	709412.9061163994	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	2732	3832	15.0	-1	True	AATAAA	-12
PB.9849.8	chr6	-	1463	11	incomplete-splice_match	PPP1R10	ENST00000376511.6	4525	20	-1	4639	-1	-21	3prime_fragment	FALSE	canonical	1	35153	junction_10	163052.13506250078	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	909	555	1463	80.0	-3	True	NA	NA
PB.3151.31	chr13	-	3584	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	-1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1071904.3256549225	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	120	2003	15.0	455	False	AATAAA	-12
PB.3151.30	chr13	-	3726	16	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	28	2	any annotated donor/acceptor	FALSE	canonical	1	1015	junction_2	1085973.2106888457	NA	1	1	TRUE	NA	NA	NA	C	coding	550	1653	91	1743	15.0	-2	True	AATAAA	-12
PB.9849.5	chr6	-	4411	21	novel_not_in_catalog	PPP1R10	novel	4525	20	NA	NA	1	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159520.22918378565	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	553	3375	20.0	-1	True	AATAAA	-18
PB.9849.4	chr6	-	4503	20	full-splice_match	PPP1R10	ENST00000376511.6	4525	20	1	21	1	-21	multi-exon	FALSE	canonical	1	35153	junction_19	137203.7308776346	NA	4	1	TRUE	NA	NA	NA	C	coding	940	2823	553	3375	45.0	-1	True	AATAAA	-7
PB.7445.1	chr21	-	5250	4	novel_not_in_catalog	CU638689.4	novel	785	4	NA	NA	0	6940	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	B	coding	195	588	2574	3161	85.0	NA	False	NA	NA
PB.9849.1	chr6	-	4101	20	novel_not_in_catalog	PPP1R10	novel	4525	20	NA	NA	1	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	160332.84722038405	NA	1	1	TRUE	NA	NA	NA	C	coding	775	2328	553	2880	20.0	-1	True	AATAAA	-26
PB.3151.39	chr13	-	2392	16	full-splice_match	LCP1	ENST00000323076.6	3787	16	82	1313	-38	-1313	multi-exon	FALSE	canonical	1	1963481	junction_15	685358.7765944167	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	157	2040	5.0	-20	True	NA	NA
PB.3151.38	chr13	-	2582	16	full-splice_match	LCP1	ENST00000323076.6	3787	16	151	1054	31	-1054	multi-exon	FALSE	canonical	1	1963481	junction_15	685358.7765944167	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	88	1971	15.0	1	True	GATAAA	-23
PB.2606.19	chr12	+	4229	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	-8	2206	2	281	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	1	NA	TRUE	NA	NA	NA	C	coding	724	2175	121	2295	30.0	-4	True	AATAAA	-14
PB.2606.18	chr12	+	2344	17	novel_in_catalog	LARP4	novel	567	4	NA	NA	0	-100	intron_retention	FALSE	canonical	1	56771	junction_2	75630.94352842624	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1962	382	2343	65.0	-6	True	NA	NA
PB.7052.19	chr2	-	6815	43	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	-55	227	intron_retention	FALSE	canonical	0	0	junction_41	300515.956038431	NA	1	NA	TRUE	NA	NA	NA	C	coding	2040	6123	353	6475	15.0	13	True	AATAAA	-17
PB.902.3	chr1	-	5118	10	full-splice_match	ILDR2	ENST00000271417.7	13140	10	-100	8122	58	2553	multi-exon	FALSE	canonical	1	11525	junction_7	5291.3726380837825	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	157	2076	30.0	36	True	AATAAA	-40
PB.2606.15	chr12	+	6202	15	full-splice_match	LARP4	ENST00000347328.9	3621	15	-100	-2481	-4	-18	multi-exon	FALSE	canonical	1	29538	junction_8	74909.90427445601	NA	2	NA	TRUE	NA	NA	NA	C	coding	653	1962	127	2088	75.0	-10	True	NA	NA
PB.2606.14	chr12	+	6505	17	novel_in_catalog	LARP4	novel	567	4	NA	NA	-5	-18	intron_retention	FALSE	canonical	1	3086	junction_2	86155.88720632267	NA	2	NA	TRUE	NA	NA	NA	C	coding	654	1965	427	2391	75.0	-11	True	NA	NA
PB.2606.17	chr12	+	4018	15	full-splice_match	LARP4	ENST00000347328.9	3621	15	-97	-300	-1	280	multi-exon	FALSE	canonical	1	29538	junction_8	74909.90427445601	NA	2	NA	TRUE	NA	NA	NA	C	coding	653	1962	124	2085	30.0	-7	True	AATAAA	-13
PB.2606.16	chr12	+	2289	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	-4	4142	0	-100	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2172	117	2288	65.0	0	True	NA	NA
PB.2606.11	chr12	+	2689	17	novel_in_catalog	LARP4	novel	567	4	NA	NA	-11	234	intron_retention	FALSE	canonical	1	56771	junction_2	75630.94352842624	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	393	2357	75.0	-17	True	NA	NA
PB.2606.10	chr12	+	2641	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	-22	3808	-12	234	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	135	2309	75.0	-18	True	NA	NA
PB.2606.13	chr12	+	2966	10	incomplete-splice_match	LARP4	ENST00000522085.5	1577	11	-27	5355	-8	1170	3prime_fragment	FALSE	canonical	1	59143	junction_3	76973.51007174762	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	131	1255	30.0	-14	True	AATAAA	-31
PB.2606.12	chr12	+	2902	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	-19	3544	-9	-3	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	132	2306	30.0	-15	True	AGTAAA	-19
PB.3581.1	chr14	+	2541	1	genic	VASH1	novel	NA	NA	NA	NA	-722	-9643	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	115	348	1356	1703	80.0	-1	True	AATACA	-12
PB.8615.6	chr3	-	2012	13	novel_in_catalog	SDHAP1	novel	706	5	NA	NA	-8	-22	no_combination_of_known_junctions	FALSE	canonical	1	5793	junction_9	58453.40861793738	NA	0	NA	TRUE	NA	NA	NA	B	coding	168	507	1297	1803	70.0	NA	False	GATAAA	-17
PB.9801.1	chr6	+	3161	8	full-splice_match	BTN2A1	ENST00000429381.5	3113	8	-41	-7	-2	7	multi-exon	FALSE	canonical	1	19558	junction_7	62312.17272437748	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	254	1258	30.0	-122	False	NA	NA
PB.696.6	chr1	+	2044	15	novel_in_catalog	GPR89B	novel	1934	14	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	148	junction_9	17926.07041918193	NA	2	1	TRUE	NA	NA	NA	C	coding	153	462	1164	1625	20.0	-54	False	ATTAAA	-12
PB.8615.5	chr3	-	2108	14	novel_in_catalog	SDHAP1	novel	706	5	NA	NA	4	-22	combination_of_known_junctions	FALSE	canonical	1	5793	junction_8	54451.86486099661	NA	0	NA	TRUE	NA	NA	NA	B	coding	150	453	1447	1899	70.0	NA	False	GATAAA	-17
PB.11875.3	chr9	-	3593	18	full-splice_match	RALGDS	ENST00000372047.7	3598	18	3	2	3	-1	multi-exon	FALSE	canonical	1	88107	junction_17	144881.99981992264	NA	2	NA	TRUE	NA	NA	NA	C	coding	902	2709	20	2728	20.0	9943	False	ATTAAA	-16
PB.8615.4	chr3	-	1882	12	novel_in_catalog	SDHAP1	novel	706	5	NA	NA	-11	-9	no_combination_of_known_junctions	FALSE	canonical	1	5793	junction_8	56579.773527704056	NA	0	NA	TRUE	NA	NA	NA	B	coding	166	501	1187	1687	65.0	NA	False	AATAAA	-11
PB.696.8	chr1	+	3360	13	novel_not_in_catalog	GPR89B	novel	1934	14	NA	NA	-16	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	19196.31149664927	NA	3	2	TRUE	NA	NA	NA	C	coding	132	399	498	896	20.0	-2	True	ATTAAA	-13
PB.6159.2	chr19	+	1857	10	full-splice_match	NR1H2	ENST00000599105.5	1830	10	-16	-11	0	11	multi-exon	FALSE	canonical	1	43725	junction_6	289572.2395189152	NA	3	NA	TRUE	NA	NA	NA	C	coding	416	1251	248	1498	75.0	-34	True	NA	NA
PB.6159.3	chr19	+	2064	9	novel_in_catalog	NR1H2	novel	507	5	NA	NA	5	11	intron_retention	FALSE	canonical	1	610701	junction_8	188538.62087907712	NA	4	NA	TRUE	NA	NA	NA	C	coding	235	708	998	1705	75.0	-27	True	NA	NA
PB.6159.1	chr19	+	1971	10	full-splice_match	NR1H2	ENST00000253727.9	1998	10	7	20	3	12	multi-exon	FALSE	canonical	1	610701	junction_9	178086.4210377217	NA	2	NA	TRUE	NA	NA	NA	C	coding	460	1383	229	1611	75.0	-15	True	NA	NA
PB.6159.4	chr19	+	2021	10	novel_in_catalog	NR1H2	novel	507	5	NA	NA	1	12	combination_of_known_junctions	FALSE	canonical	1	6476	junction_2	316633.59705221147	NA	13	NA	TRUE	NA	NA	NA	C	coding	460	1383	279	1661	75.0	-31	True	NA	NA
PB.6159.5	chr19	+	2407	10	full-splice_match	NR1H2	ENST00000253727.9	1998	10	-5	-404	5	404	multi-exon	FALSE	canonical	1	610701	junction_9	178086.4210377217	NA	2	NA	TRUE	NA	NA	NA	C	coding	460	1383	241	1623	40.0	-27	True	NA	NA
PB.7054.11	chr2	-	1690	13	novel_in_catalog	SP110	novel	2426	19	NA	NA	0	-25	no_combination_of_known_junctions	FALSE	canonical	1	3463	junction_1	135022.4566510193	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	118	1518	75.0	-15	True	AAAACA	-45
PB.7843.25	chr22	-	3432	12	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	1452	junction_2	285314.0955595696	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	205	1623	20.0	19	False	AATAAA	-15
PB.7843.26	chr22	-	3405	11	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	12282	0	any annotated donor/acceptor	FALSE	canonical	1	2617	junction_10	240260.36968255916	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	363	1823	20.0	-1	True	AATAAA	-15
PB.7054.12	chr2	-	1390	11	incomplete-splice_match	SP110	ENST00000258382.9	2080	15	123	9525	0	-8634	3prime_fragment	FALSE	canonical	1	237166	junction_3	84435.40030105856	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1272	118	1389	40.0	-15	True	ACTAAA	-20
PB.7843.20	chr22	-	3112	11	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	-371	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	240939.75363980513	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	69	1529	25.0	-2	True	AATAAA	-16
PB.7843.21	chr22	-	3063	10	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	1	1894	junction_9	252816.3090668259	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	143	1480	25.0	-4	True	AATAAA	-16
PB.7843.22	chr22	-	3012	9	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	-26	1	no_combination_of_known_junctions	FALSE	canonical	1	38221	junction_8	264836.68779029534	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	215	1429	25.0	-5	True	AATAAA	-16
PB.7843.28	chr22	-	2496	12	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	-18	423	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	287137.28183142154	NA	15	1	TRUE	NA	NA	NA	C	coding	486	1461	186	1646	20.0	-2	True	NA	NA
PB.7843.29	chr22	-	2060	11	full-splice_match	PACSIN2	ENST00000263246.7	3249	11	-4	1193	-4	-34	multi-exon	FALSE	canonical	1	444039	junction_8	136292.99208235176	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	207	1667	25.0	17	False	AATGAA	-16
PB.8828.2	chr4	-	1769	10	novel_not_in_catalog	NAAA	novel	1900	11	NA	NA	13	-9	any annotated donor/acceptor	FALSE	canonical	1	8376	junction_1	148955.796377298	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	50	1054	35.0	14	True	AATAAA	-42
PB.7575.8	chr21	-	6263	29	novel_not_in_catalog	MCM3AP	novel	6193	28	NA	NA	-300	-1	any annotated donor/acceptor	FALSE	canonical	1	1798	junction_28	134269.08484337924	NA	3	1	TRUE	NA	NA	NA	C	coding	1980	5943	187	6129	25.0	14	False	GATAAA	-14
PB.3890.1	chr15	-	1869	10	full-splice_match	MNS1	ENST00000260453.3	2023	10	76	78	24	-78	multi-exon	FALSE	canonical	1	37864	junction_9	10691.988365588346	NA	0	NA	TRUE	NA	NA	NA	A	coding	495	1488	90	1577	25.0	41	True	NA	NA
PB.11060.4	chr8	+	3643	8	full-splice_match	FZD3	ENST00000240093.7	13736	8	-59	10152	-8	135	multi-exon	FALSE	canonical	1	17827	junction_1	37834.66281016898	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	538	2538	30.0	-51	True	AATATA	-15
PB.4300.12	chr16	+	2255	6	novel_not_in_catalog	METTL9	novel	763	5	NA	NA	36	-1	any annotated donor/acceptor	FALSE	canonical	1	5164	junction_5	491796.48906945245	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	107	1060	15.0	36	True	AATAAA	-18
PB.12211.2	chrX	-	3051	8	full-splice_match	RBM41	ENST00000372487.5	2579	8	-22	-450	1	450	multi-exon	FALSE	canonical	1	20983	junction_1	47726.178596109654	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	50	1267	95.0	-1	True	NA	NA
PB.12211.1	chrX	-	4921	8	novel_in_catalog	RBM41	novel	2579	8	NA	NA	1	451	intron_retention	FALSE	canonical	1	57144	junction_3	37638.57332903172	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	50	1363	95.0	-1	True	NA	NA
PB.4300.11	chr16	+	2601	5	full-splice_match	METTL9	ENST00000396014.8	1817	5	64	-848	30	-504	multi-exon	FALSE	canonical	1	466437	junction_4	347993.65860637464	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	113	1066	65.0	30	True	NA	NA
PB.12211.7	chrX	-	2545	7	full-splice_match	RBM41	ENST00000372479.7	1662	7	-22	-861	-3	23	multi-exon	FALSE	canonical	1	58848	junction_3	39357.600981259005	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	54	1295	60.0	-5	True	NA	NA
PB.12211.6	chrX	-	2639	8	novel_in_catalog	RBM41	novel	2579	8	NA	NA	-6	42	intron_retention	FALSE	canonical	1	57144	junction_3	37638.57332903172	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	57	1370	65.0	-8	True	NA	NA
PB.12211.5	chrX	-	2606	8	full-splice_match	RBM41	ENST00000372487.5	2579	8	-27	0	-4	0	multi-exon	FALSE	canonical	1	20983	junction_1	47726.178596109654	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	55	1272	75.0	-6	True	NA	NA
PB.12211.4	chrX	-	2673	9	novel_in_catalog	RBM41	novel	2579	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	20983	junction_1	44956.75106908305	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	50	1339	75.0	-1	True	NA	NA
PB.12211.9	chrX	-	1677	7	full-splice_match	RBM41	ENST00000372479.7	1662	7	-18	3	1	-3	multi-exon	FALSE	canonical	1	58848	junction_3	39357.600981259005	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	50	1291	35.0	-1	True	AATAAA	-18
PB.12211.8	chrX	-	2335	7	full-splice_match	RBM41	ENST00000372479.7	1662	7	-30	-643	-11	150	multi-exon	FALSE	canonical	1	58848	junction_3	39357.600981259005	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	62	1303	70.0	-13	True	NA	NA
PB.9855.8	chr6	+	2610	4	full-splice_match	TUBB	ENST00000330914.7	2632	4	12	10	12	-10	multi-exon	FALSE	canonical	1	15151	junction_3	2505605.6920718565	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	473	1591	40.0	5	True	AATAAA	-10
PB.8563.3	chr3	+	5241	33	full-splice_match	EIF4G1	ENST00000414031.5	5569	33	29	299	-11	0	multi-exon	FALSE	canonical	1	39483	junction_3	763871.7879700958	NA	4	NA	TRUE	NA	NA	NA	C	coding	1559	4680	416	5095	10.0	-75	True	AATAAA	-15
PB.3602.1	chr14	+	1716	2	full-splice_match	GPR65	ENST00000267549.4	4522	2	12	2794	12	-2794	multi-exon	FALSE	canonical	1	82345	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	337	1014	547	1560	10.0	-2	True	NA	NA
PB.4157.2	chr16	-	1533	7	full-splice_match	SPSB3	ENST00000566339.5	1784	7	250	1	-3	-1	multi-exon	FALSE	canonical	1	281960	junction_4	146160.81786625762	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	82	1149	30.0	-5	True	AATAAA	-24
PB.4157.3	chr16	-	1614	6	full-splice_match	SPSB3	ENST00000567868.5	1628	6	19	-5	9	-1	multi-exon	FALSE	canonical	1	322783	junction_5	132170.08881649433	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	547	1230	30.0	27	True	AATAAA	-24
PB.4157.1	chr16	-	1808	4	full-splice_match	SPSB3	ENST00000569380.5	1781	4	-21	-6	-6	0	multi-exon	FALSE	canonical	1	322783	junction_3	113470.36837283408	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	797	1423	25.0	-8	True	AATAAA	-25
PB.10945.2	chr7	-	3709	21	novel_not_in_catalog	PAXIP1	novel	3827	21	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	69345.68036410055	NA	0	NA	TRUE	NA	NA	NA	B	coding	1069	3210	42	3251	35.0	-25	True	AATAAA	-16
PB.11060.5	chr8	+	2937	8	full-splice_match	FZD3	ENST00000240093.7	13736	8	-59	10858	-8	-571	multi-exon	FALSE	canonical	1	17827	junction_1	37834.66281016898	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	538	2538	45.0	-51	True	AATAAA	-15
PB.8563.1	chr3	+	5082	29	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	23666	junction_1	697547.8710230216	NA	0	NA	TRUE	NA	NA	NA	C	coding	1436	4311	329	4639	15.0	-1	True	ATTAAA	-14
PB.8563.7	chr3	+	3058	19	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	39483	junction_3	801752.4088328329	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2763	295	3057	60.0	15	True	NA	NA
PB.6875.1	chr2	-	6259	24	full-splice_match	CCDC141	ENST00000443758.6	9131	24	4	2868	0	-2356	multi-exon	FALSE	canonical	1	11973	junction_7	5735.141277968736	NA	1	NA	TRUE	NA	NA	NA	C	coding	1530	4593	119	4711	15.0	-1	True	AGTAAA	-12
PB.6875.2	chr2	-	2512	15	incomplete-splice_match	CCDC141	ENST00000443758.6	9131	24	-73	39437	-50	2939	3prime_fragment	FALSE	canonical	1	13118	junction_11	5751.107675474174	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2316	196	2511	65.0	-78	True	AAGAAA	-37
PB.1932.2	chr11	-	3407	1	novel_in_catalog	CELF1	novel	4583	14	NA	NA	3008	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	109	330	2296	2625	35.0	-568	False	ATTAAA	-10
PB.1932.3	chr11	-	4072	16	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-12	-636	no_combination_of_known_junctions	FALSE	canonical	1	18601	junction_15	242112.23230765428	NA	5	1	TRUE	NA	NA	NA	C	coding	486	1461	261	1721	90.0	0	True	NA	NA
PB.11098.34	chr8	+	3203	12	novel_in_catalog	TACC1	novel	5510	13	NA	NA	99	557	combination_of_known_junctions	FALSE	canonical	1	11311	junction_1	175959.77619580005	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	403	2148	25.0	34	False	ATTAAA	-32
PB.1932.6	chr11	-	4215	17	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-15	-636	no_combination_of_known_junctions	FALSE	canonical	1	18601	junction_16	247994.81573903415	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	335	1864	90.0	-3	True	NA	NA
PB.1932.7	chr11	-	4178	16	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-15	-636	combination_of_known_junctions	FALSE	canonical	1	18737	junction_15	240788.6262482235	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	295	1827	90.0	-3	True	NA	NA
PB.1932.4	chr11	-	4269	18	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-12	-636	any annotated donor/acceptor	FALSE	canonical	1	1151	junction_14	264479.2080500769	NA	7	1	TRUE	NA	NA	NA	C	coding	528	1587	332	1918	90.0	0	True	NA	NA
PB.1932.5	chr11	-	4226	17	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-14	-636	no_combination_of_known_junctions	FALSE	canonical	1	18601	junction_16	239465.86163633925	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	334	1875	90.0	-2	True	NA	NA
PB.1932.8	chr11	-	3962	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-14	-636	combination_of_known_junctions	FALSE	canonical	1	149556	junction_1	184793.1342649598	NA	1	1	TRUE	NA	NA	NA	C	coding	486	1461	151	1611	90.0	-2	True	NA	NA
PB.1932.9	chr11	-	3976	14	full-splice_match	CELF1	ENST00000310513.10	4583	14	-40	647	-40	-636	multi-exon	FALSE	canonical	1	122396	junction_7	204995.49114028376	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	177	1625	90.0	1	True	NA	NA
PB.831.9	chr1	-	6163	1	genic	ISG20L2	novel	NA	NA	NA	NA	1	325	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	303	912	789	1700	90.0	4	True	NA	NA
PB.728.8	chr1	-	1286	3	full-splice_match	ENSA	ENST00000271690.12	2818	3	-3	1535	1	-194	multi-exon	FALSE	canonical	1	1052	junction_1	295232.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	111	464	30.0	-4	True	NA	NA
PB.5386.1	chr18	+	3687	5	full-splice_match	TWSG1	ENST00000262120.9	3756	5	68	1	-15	-1	multi-exon	FALSE	canonical	1	264506	junction_1	117272.02202784772	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	124	795	20.0	1	True	AATAAA	-12
PB.728.2	chr1	-	1923	4	full-splice_match	ENSA	ENST00000361532.9	792	4	17	-1148	5	-42	multi-exon	FALSE	canonical	1	1052	junction_2	774326.0045933855	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	19	372	80.0	9	True	NA	NA
PB.3444.30	chr14	-	1552	2	full-splice_match	DDHD1	ENST00000557445.1	698	2	-853	-1	29	1	multi-exon	FALSE	canonical	1	158984	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	156	1181	65.0	60	True	NA	NA
PB.5386.2	chr18	+	2058	5	full-splice_match	TWSG1	ENST00000262120.9	3756	5	67	1631	-16	-28	multi-exon	FALSE	canonical	1	264506	junction_1	117272.02202784772	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	125	796	40.0	0	True	AATAAA	-11
PB.5386.5	chr18	+	3857	7	full-splice_match	TWSG1	ENST00000583147.5	2311	7	39	-1585	39	-18	multi-exon	FALSE	canonical	1	1892	junction_4	211958.89781511886	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	536	982	60.0	-28	True	AAAAAG	-7
PB.5386.4	chr18	+	3058	5	full-splice_match	TWSG1	ENST00000262120.9	3756	5	6	692	6	-692	multi-exon	FALSE	canonical	1	264506	junction_1	117272.02202784772	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	186	857	50.0	0	True	NA	NA
PB.728.5	chr1	-	2854	3	full-splice_match	ENSA	ENST00000271690.12	2818	3	-35	-1	0	1	multi-exon	FALSE	canonical	1	1052	junction_1	295232.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	143	496	5.0	-36	True	ATTAAA	-29
PB.728.4	chr1	-	1101	4	full-splice_match	ENSA	ENST00000361532.9	792	4	4	-313	3	313	multi-exon	FALSE	canonical	1	1052	junction_2	774326.0045933855	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	32	385	35.0	-4	True	AATAAA	-34
PB.9868.2	chr6	+	2428	2	full-splice_match	HCP5	ENST00000541196.2	2432	2	3	1	0	-1	multi-exon	FALSE	canonical	1	241798	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	394	792	25.0	0	True	NA	NA
PB.9868.3	chr6	+	2532	2	full-splice_match	HCP5	ENST00000541196.2	2432	2	3	-103	0	-2	multi-exon	FALSE	canonical	1	241798	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	394	792	30.0	0	True	NA	NA
PB.9868.1	chr6	+	2800	3	novel_not_in_catalog	HCP5	novel	2658	3	NA	NA	-32	1430	intron_retention	FALSE	canonical	1	3245	junction_2	119276.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	1900	2322	20.0	-35	False	AATAAA	-13
PB.9868.6	chr6	+	2349	3	full-splice_match	HCP5	ENST00000460889.5	465	3	0	-1884	0	1	multi-exon	FALSE	canonical	1	349	junction_2	120724.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	313	711	20.0	0	True	NA	NA
PB.9868.4	chr6	+	2518	1	novel_in_catalog	HCP5	novel	2658	3	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	132	399	485	883	25.0	0	True	NA	NA
PB.9868.5	chr6	+	5259	3	novel_not_in_catalog	HCP5	novel	2658	3	NA	NA	0	3924	intron_retention	FALSE	canonical	1	3245	junction_2	119276.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	1865	2287	80.0	0	True	NA	NA
PB.1026.1	chr1	-	6613	30	full-splice_match	KIF14	ENST00000367350.4	7274	30	-17	678	-17	-678	multi-exon	FALSE	canonical	1	30651	junction_29	23797.68024056846	NA	1	NA	TRUE	NA	NA	NA	C	coding	1648	4947	457	5403	90.0	-1	True	NA	NA
PB.290.9	chr1	+	2983	12	novel_not_in_catalog	THRAP3	novel	4432	12	NA	NA	-2	-2517	any annotated donor/acceptor	FALSE	canonical	1	48881	junction_8	290034.6495641255	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	211	2373	60.0	-24	True	NA	NA
PB.290.8	chr1	+	4411	12	full-splice_match	THRAP3	ENST00000354618.9	4432	12	17	4	0	-4	multi-exon	FALSE	canonical	1	214552	junction_6	189387.10847654712	NA	20	1	TRUE	NA	NA	NA	C	coding	955	2868	208	3075	20.0	-21	True	AATAAA	-20
PB.1026.4	chr1	-	2801	13	incomplete-splice_match	KIF14	ENST00000367350.4	7274	30	-33	48585	-33	-48585	3prime_fragment	FALSE	canonical	1	30651	junction_12	28561.480394152466	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	473	2800	70.0	-1	True	AAGAAA	-16
PB.290.3	chr1	+	4325	11	novel_not_in_catalog	THRAP3	novel	4432	12	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	48940	junction_1	274458.8873245135	NA	4	NA	TRUE	NA	NA	NA	C	coding	954	2865	125	2989	20.0	-41	True	AATAAA	-20
PB.290.2	chr1	+	2863	12	incomplete-splice_match	THRAP3	ENST00000648638.1	3825	14	-23	3726	-6	-2517	3prime_fragment	FALSE	canonical	1	25841	junction_2	297564.11440911796	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2580	283	2862	60.0	-5028	False	NA	NA
PB.2746.14	chr12	+	2115	9	full-splice_match	RAP1B	ENST00000537460.5	1072	9	25	-1068	0	-53	multi-exon	FALSE	canonical	1	271	junction_8	74600.54214573443	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	341	895	40.0	0	True	ATTAAA	-22
PB.2746.12	chr12	+	3180	7	incomplete-splice_match	RAP1B	ENST00000393436.9	2049	8	75	856	0	19	intron_retention	FALSE	canonical	1	341	junction_6	77274.2488751733	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	147	701	40.0	0	True	AATAAA	-22
PB.2746.13	chr12	+	2259	8	full-splice_match	RAP1B	ENST00000393436.9	2049	8	75	-285	0	285	multi-exon	FALSE	canonical	1	271	junction_7	77004.24582516239	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	147	701	30.0	0	True	AATAAA	-24
PB.2746.10	chr12	+	1855	6	full-splice_match	RAP1B	ENST00000450214.6	1466	6	10	-399	0	1	multi-exon	FALSE	canonical	1	271	junction_5	194558.565515271	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	153	581	20.0	-9704	False	AATAAA	-34
PB.2746.11	chr12	+	2821	8	full-splice_match	RAP1B	ENST00000250559.13	13438	8	86	10531	0	848	multi-exon	FALSE	canonical	1	271	junction_7	166209.0632559132	NA	2	NA	TRUE	NA	NA	NA	C	coding	184	555	146	700	25.0	-9697	False	NA	NA
PB.1829.13	chr11	+	3987	3	full-splice_match	FAR1	ENST00000532502.1	5820	3	1825	8	1825	-8	multi-exon	FALSE	canonical	1	232150	junction_1	103818.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	4	423	30.0	-9064	False	ATTAAA	-14
PB.871.5	chr1	+	2525	13	novel_in_catalog	USP21	novel	1150	5	NA	NA	-18	0	intron_retention	FALSE	canonical	1	48575	junction_1	77977.56806550024	NA	5	1	TRUE	NA	NA	NA	C	coding	639	1920	339	2258	50.0	3	True	AATAAA	-7
PB.1829.11	chr11	+	1774	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	41	3449	0	-3449	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	104	1651	35.0	0	True	ATTAAA	-25
PB.1829.10	chr11	+	5215	12	full-splice_match	FAR1	ENST00000354817.7	5264	12	41	8	0	-8	multi-exon	FALSE	canonical	1	150215	junction_9	85298.66561017255	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	104	1651	30.0	0	True	ATTAAA	-14
PB.7289.4	chr20	+	8628	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	18	-3	intron_retention	FALSE	canonical	1	79320	junction_15	54142.83126898372	NA	1	NA	TRUE	NA	NA	NA	C	coding	1490	4473	267	4739	20.0	-13	True	ATTAAA	-21
PB.5063.19	chr17	+	2224	5	full-splice_match	GOSR2	ENST00000640269.1	2190	5	2	-36	0	36	multi-exon	FALSE	canonical	1	23065	junction_1	214182.01542146344	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	134	667	15.0	2	True	AATACA	-44
PB.5063.18	chr17	+	2133	6	full-splice_match	GOSR2	ENST00000640051.1	3964	6	32	1799	0	268	multi-exon	FALSE	canonical	1	434971	junction_2	40245.6637992219	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	34	672	20.0	0	True	NA	NA
PB.12219.19	chrX	-	1228	1	novel_in_catalog	ACSL4	novel	390	2	NA	NA	-7881	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1002	False	AATAAA	-13
PB.12219.18	chrX	-	5062	17	novel_not_in_catalog	ACSL4	novel	390	2	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	2029	junction_15	235559.85230502425	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	358	2370	30.0	-4	True	AATAAA	-16
PB.6869.2	chr2	+	3354	24	full-splice_match	OSBPL6	ENST00000409045.7	3427	24	-68	141	-26	10	multi-exon	FALSE	canonical	1	20686	junction_1	20262.424834130543	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	571	3282	10.0	-189	False	AATAAA	-26
PB.6869.3	chr2	+	3492	24	full-splice_match	OSBPL6	ENST00000409045.7	3427	24	-64	-1	-22	1	multi-exon	FALSE	canonical	1	20686	junction_1	20262.424834130543	NA	2	NA	TRUE	NA	NA	NA	C	coding	903	2712	567	3278	100.0	-185	False	NA	NA
PB.11875.5	chr9	-	3551	18	full-splice_match	RALGDS	ENST00000372050.7	3634	18	-33	116	-33	-115	multi-exon	FALSE	canonical	1	88107	junction_17	144781.39081019443	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	56	2800	85.0	9975	False	NA	NA
PB.6869.1	chr2	+	3590	25	full-splice_match	OSBPL6	ENST00000190611.8	10513	25	-197	7120	-29	-1	multi-exon	FALSE	canonical	1	20686	junction_1	21135.853235018032	NA	3	NA	TRUE	NA	NA	NA	C	coding	934	2805	574	3378	95.0	-192	False	NA	NA
PB.5063.11	chr17	+	4010	6	full-splice_match	GOSR2	ENST00000638216.1	3574	6	-7	-429	0	9	multi-exon	FALSE	canonical	1	23065	junction_1	196486.07202791754	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	157	741	50.0	-21	True	AATAAA	-30
PB.5063.10	chr17	+	3048	5	full-splice_match	GOSR2	ENST00000640621.1	3059	5	0	11	0	-11	multi-exon	FALSE	canonical	1	434971	junction_2	44784.829554074444	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	56	643	10.0	-22	True	NA	NA
PB.2723.1	chr12	+	1710	5	incomplete-splice_match	SRGAP1	ENST00000537556.1	2976	10	-1052	38980	-542	-683	3prime_fragment	FALSE	canonical	1	60243	junction_2	7685.035698518257	NA	0	NA	TRUE	NA	NA	NA	B	coding	214	642	1067	1708	70.0	-1054	False	NA	NA
PB.12219.10	chrX	-	5225	16	novel_in_catalog	ACSL4	novel	390	2	NA	NA	-190	0	no_combination_of_known_junctions	FALSE	canonical	1	206809	junction_14	167811.28496413925	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	521	2533	30.0	-5	True	AATAAA	-16
PB.5063.15	chr17	+	1978	4	full-splice_match	GOSR2	ENST00000575949.6	1444	4	-2	-532	-2	171	multi-exon	FALSE	canonical	1	434971	junction_2	48415.51500867832	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	43	474	70.0	-9	True	NA	NA
PB.5063.14	chr17	+	3947	6	full-splice_match	GOSR2	ENST00000640051.1	3964	6	16	1	-2	0	multi-exon	FALSE	canonical	1	434971	junction_2	40245.6637992219	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	50	688	45.0	-16	True	AATAAA	-20
PB.5063.17	chr17	+	2828	3	full-splice_match	GOSR2	ENST00000640709.1	2679	3	22	-171	0	171	multi-exon	FALSE	canonical	1	434971	junction_2	31902.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.5063.16	chr17	+	3326	6	full-splice_match	GOSR2	ENST00000638216.1	3574	6	14	234	0	10	multi-exon	FALSE	canonical	1	23065	junction_1	196486.07202791754	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	136	720	40.0	0	True	AATAAA	-28
PB.2662.9	chr12	-	3144	9	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	2067	junction_5	475651.07946056424	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	1009	1734	5.0	-1	True	AATAAA	-14
PB.2662.8	chr12	-	3263	9	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	73403	junction_2	467900.3193803676	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	951	1832	5.0	-1	True	AATAAA	-14
PB.11761.10	chr9	-	2573	8	full-splice_match	RAB14	ENST00000373840.8	4145	8	0	1572	0	-1572	multi-exon	FALSE	canonical	1	385902	junction_7	279351.9307237042	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	239	886	30.0	-1	True	AATAAA	-22
PB.11761.11	chr9	-	1660	8	full-splice_match	RAB14	ENST00000373840.8	4145	8	-30	2515	-30	847	multi-exon	FALSE	canonical	1	385902	junction_7	279351.9307237042	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	269	916	40.0	-31	True	AATAAA	-26
PB.1050.1	chr1	+	3249	5	full-splice_match	LAX1	ENST00000442561.6	3023	5	7	-233	6	117	multi-exon	FALSE	canonical	1	22780	junction_1	9429.401067936393	NA	1	NA	TRUE	NA	NA	NA	A	coding	398	1197	384	1580	100.0	0	True	NA	NA
PB.10514.6	chr7	-	1396	3	full-splice_match	POLR2J4	ENST00000326391.6	1422	3	21	5	0	-5	multi-exon	FALSE	canonical	1	102360	junction_2	47898.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	15	48	472	519	35.0	-1	True	NA	NA
PB.2662.3	chr12	-	2388	11	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	207093	junction_6	390199.43399073504	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	951	2279	0.0	-1	True	AATAAA	-15
PB.2662.1	chr12	-	1922	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	2	intron_retention	FALSE	canonical	1	235	junction_2	467529.48020247347	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	32	1675	0.0	-1	True	AATAAA	-17
PB.2662.7	chr12	-	3242	9	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1078728	junction_8	216424.99385742744	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	951	1832	5.0	-1	True	AATAAA	-14
PB.2662.6	chr12	-	3493	8	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1078728	junction_7	217976.46209260338	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	2975	3385	5.0	-1	True	AATAAA	-14
PB.2662.5	chr12	-	3481	8	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1078728	junction_7	225405.2407203614	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	951	1832	5.0	-1	True	AATAAA	-14
PB.2662.4	chr12	-	3730	7	novel_in_catalog	PMEL	novel	2127	11	NA	NA	2	0	intron_retention	FALSE	canonical	1	1078728	junction_6	225089.0228927336	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	3212	3622	5.0	1	True	AATAAA	-14
PB.10514.4	chr7	-	3120	3	full-splice_match	POLR2J4	ENST00000326391.6	1422	3	21	-1719	0	1719	multi-exon	FALSE	canonical	1	102360	junction_2	47898.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	15	48	472	519	95.0	-1	True	NA	NA
PB.7190.1	chr20	-	3380	21	novel_not_in_catalog	DZANK1	novel	1709	7	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	11817.3492157717	NA	0	NA	TRUE	NA	NA	NA	B	coding	758	2277	74	2350	20.0	-18	True	AATAAA	-19
PB.7190.2	chr20	-	2370	10	novel_in_catalog	DZANK1	novel	1709	7	NA	NA	-50	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	12281.321105596313	NA	2	NA	TRUE	NA	NA	NA	B	coding	290	873	468	1340	20.0	-51	False	AATAAA	-19
PB.10001.10	chr6	-	3767	10	full-splice_match	ZNF318	ENST00000361428.2	8006	10	-66	4305	-31	-4305	multi-exon	FALSE	canonical	1	52842	junction_9	47138.678272560326	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3621	145	3765	65.0	137	False	NA	NA
PB.10514.2	chr7	-	3209	12	novel_not_in_catalog	POLR2J4	novel	6466	16	NA	NA	2	5447	intron_retention	TRUE	canonical	1	3341	junction_1	34600.79998406381	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	2015	2686	0.0	-20	True	NA	NA
PB.9955.22	chr6	+	5155	6	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	15368	junction_3	151106.52112387473	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	668	1189	5.0	5	True	AATAAA	-14
PB.9955.23	chr6	+	3381	8	full-splice_match	KCTD20	ENST00000373731.6	5619	8	250	1988	0	1059	multi-exon	FALSE	canonical	1	212416	junction_1	71029.92897766003	NA	3	NA	TRUE	NA	NA	NA	C	coding	419	1260	142	1401	30.0	17	True	NA	NA
PB.9955.20	chr6	+	4614	8	full-splice_match	KCTD20	ENST00000373731.6	5619	8	234	771	-6	-5	multi-exon	FALSE	canonical	1	212416	junction_1	71029.92897766003	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	158	1417	70.0	1	True	NA	NA
PB.9955.21	chr6	+	3909	4	full-splice_match	KCTD20	ENST00000474988.5	1618	4	-15	-2276	-5	-5	multi-exon	FALSE	canonical	1	2981	junction_1	181974.05158062142	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	191	712	70.0	2	True	NA	NA
PB.9726.7	chr6	-	2152	12	novel_not_in_catalog	SLC35B3	novel	2442	12	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	191	junction_10	82718.63697344028	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	565	1674	40.0	-28	True	AATAAA	-21
PB.9726.6	chr6	-	1798	10	novel_in_catalog	SLC35B3	novel	2442	12	NA	NA	-6	-2	no_combination_of_known_junctions	FALSE	canonical	1	25048	junction_6	64428.3868285815	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	269	700	40.0	-34	True	AATAAA	-22
PB.9726.5	chr6	-	1909	10	novel_in_catalog	SLC35B3	novel	2442	12	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	67406	junction_9	55127.01655895554	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	321	1430	40.0	-36	True	AATAAA	-22
PB.9726.4	chr6	-	1923	11	full-splice_match	SLC35B3	ENST00000644923.1	1973	11	74	-24	0	-2	multi-exon	FALSE	canonical	1	145176	junction_7	37132.65109038136	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	239	1444	40.0	-4	True	AATAAA	-22
PB.9726.3	chr6	-	2067	11	novel_in_catalog	SLC35B3	novel	2442	12	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	10296	junction_10	66139.34489583338	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	383	1588	40.0	-33	True	AATAAA	-22
PB.9726.2	chr6	-	3565	11	full-splice_match	SLC35B3	ENST00000644923.1	1973	11	66	-1658	-8	27	multi-exon	FALSE	canonical	1	145176	junction_7	37132.65109038136	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	247	1452	15.0	-12	True	TATAAA	-20
PB.9726.1	chr6	-	3520	10	novel_in_catalog	SLC35B3	novel	2442	12	NA	NA	-8	28	intron_retention	TRUE	canonical	1	67406	junction_9	55127.01655895554	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	297	1406	10.0	-12	True	TATAAA	-21
PB.455.11	chr1	+	1974	5	full-splice_match	AK4	ENST00000327299.7	6836	5	-50	4912	-50	333	multi-exon	FALSE	canonical	1	102	junction_4	14889.015279728877	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	256	927	30.0	-893	False	AATAAA	-22
PB.1479.1	chr10	+	5524	22	full-splice_match	VCL	ENST00000211998.9	5490	22	-41	7	-41	-7	multi-exon	FALSE	canonical	1	84148	junction_18	349668.91549055395	NA	2	NA	TRUE	NA	NA	NA	C	coding	1134	3405	136	3540	50.0	-43	False	AATAAA	-12
PB.1479.2	chr10	+	3543	21	full-splice_match	VCL	ENST00000372755.7	6489	21	-32	2978	-32	337	multi-exon	FALSE	canonical	1	784573	junction_2	207009.830642768	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	127	3327	30.0	-34	False	TATAAA	-15
PB.1479.3	chr10	+	5031	21	full-splice_match	VCL	ENST00000372755.7	6489	21	-13	1471	-13	-268	multi-exon	FALSE	canonical	1	784573	junction_2	207009.830642768	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	108	3308	55.0	-15	False	ACTAAA	-18
PB.1479.4	chr10	+	5280	21	full-splice_match	VCL	ENST00000372755.7	6489	21	0	1209	0	-6	multi-exon	FALSE	canonical	1	784573	junction_2	207009.830642768	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	95	3295	50.0	-2	True	AATAAA	-13
PB.1479.5	chr10	+	5137	21	full-splice_match	VCL	ENST00000372755.7	6489	21	0	1352	0	-149	multi-exon	FALSE	canonical	1	784573	junction_2	207009.830642768	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	95	3295	100.0	-2	True	NA	NA
PB.1479.6	chr10	+	3332	21	full-splice_match	VCL	ENST00000372755.7	6489	21	1	3156	1	159	multi-exon	FALSE	canonical	1	784573	junction_2	207009.830642768	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	94	3294	60.0	-1	True	NA	NA
PB.1479.7	chr10	+	5339	22	full-splice_match	VCL	ENST00000211998.9	5490	22	2	149	0	-149	multi-exon	FALSE	canonical	1	84148	junction_18	349668.91549055395	NA	1	NA	TRUE	NA	NA	NA	C	coding	1134	3405	93	3497	100.0	0	True	NA	NA
PB.11215.2	chr8	-	2349	4	novel_in_catalog	C8orf59	novel	859	4	NA	NA	-5	3	intron_retention	FALSE	canonical	1	406809	junction_3	433148.5326877554	NA	2	NA	TRUE	NA	NA	NA	C	coding	100	303	1986	2288	35.0	-53	False	AATAAA	-21
PB.2555.10	chr12	+	2091	13	full-splice_match	IRAK4	ENST00000551736.5	1684	13	12	-419	6	347	multi-exon	FALSE	canonical	1	21502	junction_1	63044.29368766367	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	102	1484	35.0	5	True	AATAAA	-24
PB.2555.11	chr12	+	3081	13	novel_not_in_catalog	IRAK4	novel	1409	10	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	76424.85729296457	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	475	1248	20.0	9	True	ATTAAA	-16
PB.12391.11	chrY	-	5147	26	novel_in_catalog	KDM5D	novel	5501	12	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	1	11644	junction_21	38880.43016231173	NA	3	NA	TRUE	NA	NA	NA	C	coding	1494	4485	94	4578	35.0	-2	True	AATAAA	-17
PB.5506.3	chr18	+	4547	10	full-splice_match	TNFRSF11A	ENST00000586569.2	8147	10	-33	3633	-5	0	multi-exon	FALSE	canonical	1	10323	junction_1	10199.727425551899	NA	3	NA	TRUE	NA	NA	NA	C	coding	616	1851	72	1922	45.0	-3	True	ATTAAA	-31
PB.11327.3	chr8	-	6741	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	0	3	0	-3	multi-exon	TRUE	canonical	1	310956	junction_8	53019.434111465205	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	193	1260	25.0	-1	True	AATAAA	-14
PB.11327.4	chr8	-	5144	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	0	1600	0	-1600	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	32	NA	TRUE	NA	NA	NA	C	coding	355	1068	193	1260	15.0	-1	True	ACTAAA	-24
PB.10921.8	chr7	+	3625	2	incomplete-splice_match	REPIN1	ENST00000489432.6	2058	3	260	-1098	163	-1	5prime_fragment	FALSE	canonical	1	177182	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	653	2527	10.0	-4648	False	AATAAA	-20
PB.11327.6	chr8	-	3782	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	-42	3004	-42	2213	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	235	1302	10.0	-43	False	ATTAAA	-17
PB.5506.2	chr18	+	3168	10	full-splice_match	TNFRSF11A	ENST00000586569.2	8147	10	-38	5017	-10	-1384	multi-exon	FALSE	canonical	1	10323	junction_1	10199.727425551899	NA	3	NA	TRUE	NA	NA	NA	C	coding	616	1851	77	1927	25.0	2	True	AATAAA	-18
PB.8218.1	chr3	+	2428	4	incomplete-splice_match	SUCLG2-AS1	ENST00000650236.1	1198	8	-369	61612	-19	1393	3prime_fragment	FALSE	canonical	1	6913	junction_2	5437.092605428015	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-956	False	AATAAA	-27
PB.8000.2	chr3	+	2467	19	full-splice_match	CNOT10	ENST00000328834.9	2815	19	185	163	11	-2	multi-exon	FALSE	canonical	1	230613	junction_7	52992.31440350106	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	132	2366	30.0	8	True	AATAAA	-18
PB.2583.13	chr12	-	2865	2	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-149	-32702	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	B	coding	19	60	244	303	15.0	-1	True	ATTAAA	-18
PB.2583.12	chr12	-	3008	6	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-149	-32702	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1130927.1395861716	NA	0	NA	TRUE	NA	NA	NA	B	coding	181	546	299	844	15.0	-1	True	ATTAAA	-18
PB.2583.11	chr12	-	3405	6	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-107	-32702	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1130927.1395861716	NA	2	NA	TRUE	NA	NA	NA	B	coding	181	546	257	802	15.0	4	True	ATTAAA	-18
PB.2583.10	chr12	-	2281	2	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-149	-32701	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-1	True	ATTAAA	-19
PB.2583.17	chr12	-	3639	6	novel_in_catalog	AC073610.3	novel	939	5	NA	NA	-108	-32708	no_combination_of_known_junctions	FALSE	canonical	1	3303	junction_5	1343889.4977053136	NA	0	NA	TRUE	NA	NA	NA	B	coding	181	546	358	903	15.0	3	True	ATTAAA	-12
PB.2725.3	chr12	-	3267	4	novel_not_in_catalog	C12orf66	novel	2698	4	NA	NA	0	-298	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	27001.852310947528	NA	5	NA	TRUE	NA	NA	NA	C	coding	445	1338	29	1366	75.0	5	True	NA	NA
PB.11778.2	chr9	-	2712	16	novel_not_in_catalog	STRBP	novel	663	5	NA	NA	8100	1	any annotated donor/acceptor	FALSE	canonical	1	38	junction_15	144902.81168123995	NA	0	NA	TRUE	NA	NA	NA	B	coding	587	1764	60	1823	0.0	8028	False	TTTAAA	-27
PB.11778.3	chr9	-	2919	18	novel_in_catalog	STRBP	novel	663	5	NA	NA	-34	3	combination_of_known_junctions	FALSE	canonical	1	113664	junction_17	120591.7740243754	NA	4	NA	TRUE	NA	NA	NA	B	coding	672	2019	340	2358	15.0	-25	True	AATAAA	-26
PB.3463.3	chr14	-	2437	5	full-splice_match	ARMH4	ENST00000334342.5	2380	5	-17	-40	13	32	multi-exon	FALSE	canonical	1	2880	junction_1	16116.189319671696	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	183	2195	15.0	-4	True	AATAAA	-20
PB.3463.2	chr14	-	3187	8	full-splice_match	ARMH4	ENST00000267485.7	6495	8	13	3295	13	-3295	multi-exon	FALSE	canonical	1	19670	junction_7	8961.328869204655	NA	0	NA	TRUE	NA	NA	NA	C	coding	774	2325	183	2507	20.0	-4	True	ATTAAA	-16
PB.2583.19	chr12	-	2888	2	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-90	-32708	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	12	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	21	True	ATTAAA	-12
PB.1221.15	chr1	-	5731	21	novel_not_in_catalog	NID1	novel	5412	17	NA	NA	-40	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	119714.84861639971	NA	1	NA	TRUE	NA	NA	NA	C	coding	784	2355	1352	3706	50.0	-1	True	AATAAA	-8
PB.6844.4	chr2	+	3264	9	novel_in_catalog	CDCA7	novel	2500	9	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	32903	junction_4	171676.02558161697	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	1496	2026	25.0	-36	True	AATAAA	-12
PB.9718.1	chr6	+	2549	1	incomplete-splice_match	RREB1	ENST00000379938.6	8778	13	141622	2	18788	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	99	300	436	735	15.0	-2084	False	AATAAA	-20
PB.3522.8	chr14	-	3069	20	novel_in_catalog	ACTN1	novel	3779	21	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	37308	junction_6	560203.6331190852	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	39	2534	25.0	7543	False	ATTAAA	-12
PB.3522.2	chr14	-	3474	20	novel_in_catalog	ACTN1	novel	3779	21	NA	NA	-37	19	combination_of_known_junctions	TRUE	canonical	1	37308	junction_6	560203.6331190852	NA	3	NA	TRUE	NA	NA	NA	C	coding	831	2496	244	2739	5.0	2	True	ATTAAA	-20
PB.3522.1	chr14	-	3648	21	full-splice_match	ACTN1	ENST00000193403.10	3779	21	91	40	-87	-40	multi-exon	FALSE	canonical	1	1863077	junction_20	256670.35069888772	NA	2	NA	TRUE	NA	NA	NA	C	coding	892	2679	294	2972	30.0	7288	False	ATTAAA	-22
PB.3522.7	chr14	-	5216	20	novel_in_catalog	ACTN1	novel	3779	21	NA	NA	-40	2	intron_retention	FALSE	canonical	1	1863077	junction_19	261697.48898786557	NA	2	NA	TRUE	NA	NA	NA	C	coding	966	2901	247	3147	35.0	-1	True	ATTAAA	-20
PB.3522.6	chr14	-	3278	21	full-splice_match	ACTN1	ENST00000193403.10	3779	21	328	173	-36	2	multi-exon	FALSE	canonical	1	1863077	junction_20	256670.35069888772	NA	1	NA	TRUE	NA	NA	NA	C	coding	892	2679	57	2735	35.0	7525	False	ATTAAA	-20
PB.3522.4	chr14	-	3672	21	full-splice_match	ACTN1	ENST00000438964.6	3043	21	-69	-560	-69	17	multi-exon	FALSE	canonical	1	401131	junction_3	607132.0709099689	NA	9	1	TRUE	NA	NA	NA	C	coding	887	2664	276	2939	10.0	7306	False	ATTAAA	-18
PB.8913.14	chr4	-	2444	1	genic	PPA2	novel	NA	NA	NA	NA	-8	1712	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-31	False	AATAAA	-19
PB.8913.15	chr4	-	2307	2	novel_not_in_catalog	PPA2	novel	1684	12	NA	NA	-1	1705	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	19	492	45.0	-10	True	AATAAA	-12
PB.8913.16	chr4	-	2189	1	genic	PPA2	novel	NA	NA	NA	NA	-16	1449	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-39	False	AATAAA	-33
PB.8913.17	chr4	-	2034	2	novel_not_in_catalog	PPA2	novel	1684	12	NA	NA	1	1440	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-3	True	AATAAA	-24
PB.8913.10	chr4	-	4239	1	novel_in_catalog	PPA2	novel	1684	12	NA	NA	7	3522	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-16	True	NA	NA
PB.8913.11	chr4	-	2520	2	novel_not_in_catalog	PPA2	novel	1684	12	NA	NA	-12	1987	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	126	381	43	423	60.0	59	False	AATAAA	-18
PB.8913.12	chr4	-	2192	2	novel_not_in_catalog	PPA2	novel	1684	12	NA	NA	5	1988	any annotated donor/acceptor	FALSE	canonical	1	3300	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-18	True	AATAAA	-19
PB.8913.13	chr4	-	2692	1	novel_in_catalog	PPA2	novel	1684	12	NA	NA	0	1987	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-4	True	AATAAA	-18
PB.10449.22	chr7	-	3101	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-14	-3	intron_retention	FALSE	canonical	1	1172921	junction_1	5497539.9570136005	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	184	1245	30.0	860	False	AATAAA	-15
PB.10449.21	chr7	-	2988	11	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	0	-3	intron_retention	FALSE	canonical	1	183033	junction_1	4651931.674930968	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	30.0	-1	True	AATAAA	-15
PB.10449.20	chr7	-	3053	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	1172921	junction_1	4425233.435110509	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	172	1197	30.0	-3	True	AATAAA	-15
PB.771.1	chr1	-	2635	14	novel_not_in_catalog	CRTC2	novel	2290	10	NA	NA	-3	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	130292.1573577886	NA	3	2	TRUE	NA	NA	NA	B	coding	693	2082	122	2203	15.0	-25	True	AATAAA	-13
PB.900.6	chr1	+	2395	6	full-splice_match	POGK	ENST00000367876.8	5754	6	36	3323	36	-1452	multi-exon	FALSE	canonical	1	99964	junction_1	84091.4743849815	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	115	1944	45.0	14	True	AGTAAA	-17
PB.864.17	chr1	-	1334	1	novel_in_catalog	TSTD1	novel	457	3	NA	NA	10	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	102	309	781	1089	45.0	-15	True	AATAAA	-13
PB.3263.18	chr13	-	6747	4	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	-86	-4	intron_retention	FALSE	canonical	1	145575	junction_1	166696.5198576943	NA	9	NA	TRUE	NA	NA	NA	C	coding	152	459	222	680	15.0	22	True	ATTAAA	-20
PB.540.6	chr1	-	2176	5	full-splice_match	FAM69A	ENST00000370310.4	2574	5	16	382	16	-382	multi-exon	FALSE	canonical	1	138786	junction_2	8170.429532772436	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	56	1342	25.0	-23	True	AATAAA	-44
PB.3263.15	chr13	-	2530	7	novel_not_in_catalog	ANKRD10	novel	2495	6	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	3886	junction_4	221765.9020233323	NA	1	1	TRUE	NA	NA	NA	C	coding	169	510	925	1434	5.0	-31	True	AATAAA	-15
PB.3263.14	chr13	-	3400	1	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	11140	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	126	381	1926	2306	5.0	NA	False	AATAAA	-13
PB.3263.16	chr13	-	2229	6	novel_not_in_catalog	ANKRD10	novel	2495	6	NA	NA	217	-1	any annotated donor/acceptor	FALSE	canonical	1	3551	junction_5	192097.34163761872	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	624	1133	5.0	64	True	AATAAA	-15
PB.3263.11	chr13	-	2735	8	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	14645	junction_7	208732.34367720684	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1130	1639	5.0	-10	True	AATAAA	-15
PB.3263.10	chr13	-	2826	8	novel_not_in_catalog	ANKRD10	novel	2495	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	212476.28246532768	NA	23	2	TRUE	NA	NA	NA	C	coding	169	510	1221	1730	5.0	108	False	AATAAA	-15
PB.3263.13	chr13	-	2625	6	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	1	16427	junction_1	196835.41284128727	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	122	1069	5.0	122	False	AATAAA	-15
PB.3263.12	chr13	-	2670	7	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	26508	junction_4	188434.8314057586	NA	2	NA	TRUE	NA	NA	NA	C	coding	169	510	1065	1574	5.0	97	False	AATAAA	-15
PB.11398.5	chr8	+	2258	12	novel_not_in_catalog	HSF1	novel	2105	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	29937	junction_8	412081.2171280104	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	168	1067	10.0	-14	True	TATAAA	-17
PB.6727.2	chr2	-	4740	1	genic	MAP3K2	novel	NA	NA	NA	NA	39819	59	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	3932	False	AATAAA	-21
PB.6727.1	chr2	-	2606	1	genic	MAP3K2	novel	NA	NA	NA	NA	41954	60	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	6067	False	AATAAA	-22
PB.864.14	chr1	-	2175	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	0	708	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	3	1	TRUE	NA	NA	NA	B	coding	276	831	103	933	20.0	-1	True	AATAAA	-20
PB.3277.2	chr13	-	2437	13	novel_in_catalog	GAS6	novel	2507	7	NA	NA	-29	0	no_combination_of_known_junctions	FALSE	canonical	1	22930	junction_11	553638.4891647042	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	497	2125	20.0	-21	True	AATAAA	-20
PB.3277.1	chr13	-	2512	15	full-splice_match	GAS6	ENST00000327773.6	2490	15	-15	-7	-15	1	multi-exon	FALSE	canonical	1	210914	junction_14	486328.94907707087	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	163	2199	20.0	-7	True	AATAAA	-21
PB.6935.2	chr2	-	2856	7	full-splice_match	KCTD18	ENST00000359878.7	2940	7	82	2	82	-2	multi-exon	FALSE	canonical	1	51480	junction_6	36962.57069620865	NA	2	NA	TRUE	NA	NA	NA	C	coding	426	1281	430	1710	10.0	120	False	AATAAA	-20
PB.7484.1	chr21	-	1877	1	antisense	novelGene_BACH1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	4	True	NA	NA
PB.9447.8	chr5	+	2775	19	novel_not_in_catalog	HSPA4	novel	4825	19	NA	NA	52	0	intron_retention	FALSE	non_canonical	0	0	junction_2	500499.8011012203	NA	1	1	TRUE	NA	NA	NA	C	coding	735	2208	527	2734	20.0	-20	True	ATTAAA	-19
PB.9447.7	chr5	+	2346	17	incomplete-splice_match	HSPA4	ENST00000304858.6	4825	19	41	4630	41	-2089	3prime_fragment	FALSE	canonical	1	746881	junction_1	356090.9603680989	NA	2	NA	TRUE	NA	NA	NA	C	coding	699	2097	249	2345	50.0	-31	True	NA	NA
PB.9447.6	chr5	+	2671	18	novel_in_catalog	HSPA4	novel	4825	19	NA	NA	41	0	intron_retention	FALSE	canonical	1	3306	junction_2	513339.31893680064	NA	19	2	TRUE	NA	NA	NA	C	coding	793	2382	249	2630	20.0	-31	True	ATTAAA	-19
PB.9447.5	chr5	+	3526	19	full-splice_match	HSPA4	ENST00000304858.6	4825	19	88	1211	-78	761	multi-exon	FALSE	canonical	1	746881	junction_1	385561.1102680237	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	202	2724	25.0	16	True	ATTAAA	-20
PB.9447.4	chr5	+	3401	19	novel_not_in_catalog	HSPA4	novel	4825	19	NA	NA	-11	540	intron_retention	FALSE	canonical	1	63147	junction_12	483885.5646690766	NA	1	NA	TRUE	NA	NA	NA	C	coding	839	2520	301	2820	25.0	2	True	AATAAA	-14
PB.1630.22	chr10	-	3167	19	novel_in_catalog	NT5C2	novel	3365	17	NA	NA	6	-278	combination_of_known_junctions	FALSE	canonical	1	38249	junction_18	218367.476898751	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	82	1791	35.0	-21	True	ATTAAA	-21
PB.1630.23	chr10	-	2866	18	full-splice_match	NT5C2	ENST00000343289.9	3435	18	20	549	12	350	multi-exon	FALSE	canonical	1	38249	junction_17	184103.9186595985	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	76	1761	55.0	-15	True	NA	NA
PB.1630.20	chr10	-	3257	18	novel_in_catalog	NT5C2	novel	3365	17	NA	NA	-1	-140	no_combination_of_known_junctions	FALSE	canonical	1	9479	junction_12	247385.33659287397	NA	12	NA	TRUE	NA	NA	NA	C	coding	370	1113	631	1743	25.0	-28	True	AATAAA	-13
PB.9176.3	chr5	+	1742	8	novel_in_catalog	BRIX1	novel	1926	10	NA	NA	0	-11	intron_retention	FALSE	canonical	1	454897	junction_2	212559.4234100388	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	24	413	30.0	0	True	AATAAA	-12
PB.10926.1	chr7	+	1507	3	full-splice_match	GIMAP2	ENST00000223293.9	1449	3	-62	4	-59	-4	multi-exon	FALSE	canonical	1	202742	junction_2	45739.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	337	1014	157	1170	30.0	-94	False	AATAAA	-19
PB.10438.4	chr7	+	3657	1	novel_in_catalog	CCDC126	novel	2473	4	NA	NA	-17	-1165	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	111	336	2532	2867	80.0	-33	True	NA	NA
PB.10438.5	chr7	+	2791	6	novel_not_in_catalog	CCDC126	novel	2473	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	909	junction_4	24709.679682262173	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-16	True	AATAAA	-18
PB.10438.1	chr7	+	2400	4	full-splice_match	CCDC126	ENST00000307471.7	2473	4	72	1	9	0	multi-exon	FALSE	canonical	1	40589	junction_2	21452.003112892642	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	413	808	35.0	-698	False	AATAAA	-18
PB.10438.2	chr7	+	2663	5	full-splice_match	CCDC126	ENST00000448353.5	847	5	-133	-1683	3	0	multi-exon	FALSE	canonical	1	15808	junction_2	32966.54738139862	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	676	1071	35.0	-50	True	AATAAA	-18
PB.10438.3	chr7	+	2380	3	full-splice_match	CCDC126	ENST00000409765.5	2324	3	-54	-2	9	1	multi-exon	FALSE	canonical	1	9276	junction_1	41914.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	391	786	30.0	-44	True	AATAAA	-20
PB.7604.1	chr22	+	2395	1	full-splice_match	LINC01311	ENST00000565162.2	1445	1	320	-1270	320	1270	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	81	246	98	343	30.0	0	True	NA	NA
PB.864.12	chr1	-	3052	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	1	1586	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	3	1	TRUE	NA	NA	NA	B	coding	276	831	102	932	30.0	0	True	AATAAA	-21
PB.7964.5	chr3	-	6348	28	novel_in_catalog	ANKRD28	novel	6383	28	NA	NA	28	1188	combination_of_known_junctions	FALSE	canonical	1	156720	junction_27	77323.95630665557	NA	1	1	TRUE	NA	NA	NA	C	coding	1083	3252	1431	4682	35.0	27	True	AATAAA	-23
PB.7964.7	chr3	-	6344	28	novel_in_catalog	ANKRD28	novel	6383	28	NA	NA	38	1185	combination_of_known_junctions	FALSE	canonical	1	73502	junction_27	86293.63918741928	NA	85	3	TRUE	NA	NA	NA	C	coding	1086	3261	1421	4681	35.0	37	True	AATAAA	-20
PB.6612.2	chr2	+	4806	8	novel_not_in_catalog	THNSL2	novel	1560	6	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	6976	junction_6	45873.66011344725	NA	2	NA	TRUE	NA	NA	NA	B	coding	377	1134	2806	3939	15.0	-30	True	AATAAA	-15
PB.6612.1	chr2	+	2066	9	novel_not_in_catalog	THNSL2	novel	1560	6	NA	NA	-8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	40577.75485410695	NA	1	NA	TRUE	NA	NA	NA	B	coding	484	1455	111	1565	15.0	-31	True	AATAAA	-15
PB.771.5	chr1	-	2398	14	novel_not_in_catalog	CRTC2	novel	2290	10	NA	NA	369	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	156236.74212522907	NA	1	NA	TRUE	NA	NA	NA	B	coding	580	1743	225	1967	20.0	9969	False	AATAAA	-12
PB.6682.5	chr2	+	2270	15	novel_in_catalog	CCDC138	novel	2250	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3267	junction_1	28791.340000076412	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	900	1949	50.0	-10	True	AATAAA	-16
PB.6682.4	chr2	+	1960	1	novel_in_catalog	CCDC138	novel	2250	14	NA	NA	-1	-5951	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-11	True	NA	NA
PB.6682.7	chr2	+	2248	11	incomplete-splice_match	CCDC138	ENST00000295124.8	2383	15	11	36401	1	-6603	3prime_fragment	FALSE	canonical	1	56029	junction_1	17945.344085862493	NA	1	1	TRUE	NA	NA	NA	C	coding	444	1335	50	1384	40.0	3	True	NA	NA
PB.9176.1	chr5	+	1278	10	full-splice_match	BRIX1	ENST00000336767.5	1926	10	332	316	-2	0	multi-exon	FALSE	canonical	1	454897	junction_2	187634.74025870216	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	32	1093	20.0	-8	True	AATAAA	-23
PB.3069.1	chr13	-	4035	1	novel_in_catalog	LINC02340	novel	573	5	NA	NA	18	-44149	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	158	477	2844	3320	60.0	-11	True	NA	NA
PB.6682.3	chr2	+	2398	15	full-splice_match	CCDC138	ENST00000295124.8	2383	15	-8	-7	-2	7	multi-exon	FALSE	canonical	1	47461	junction_13	20830.855669375833	NA	2	NA	TRUE	NA	NA	NA	C	coding	665	1998	69	2066	35.0	-16	True	AATAAA	-27
PB.3069.2	chr13	-	2019	1	novel_in_catalog	LINC02340	novel	573	5	NA	NA	29	-46154	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.10778.18	chr7	-	4644	18	incomplete-splice_match	COG5	ENST00000393603.6	5418	21	327	26087	0	2620	3prime_fragment	FALSE	canonical	1	129228	junction_17	65633.37850868008	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	39	2138	5.0	-15	True	ATTAAA	-18
PB.2955.2	chr12	-	1593	8	novel_in_catalog	COQ5	novel	1535	7	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	1	23835	junction_7	215873.2085367686	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	351	1091	15.0	-4	True	AGTAAA	-14
PB.8609.4	chr3	-	7045	23	full-splice_match	ACAP2	ENST00000326793.10	7160	23	64	51	29	-51	multi-exon	FALSE	canonical	1	161944	junction_13	70460.51339591935	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	168	2504	65.0	-1	True	AATATA	-20
PB.2955.1	chr12	-	1509	7	full-splice_match	COQ5	ENST00000288532.10	1535	7	19	7	-2	-7	multi-exon	TRUE	canonical	1	282065	junction_6	104600.50062088082	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	83	1006	15.0	-9	True	AGTAAA	-15
PB.11438.4	chr9	+	5087	25	full-splice_match	JAK2	ENST00000381652.3	5285	25	15	183	15	-183	multi-exon	FALSE	canonical	1	44852	junction_1	46776.506132589915	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	486	3878	10.0	-12	True	AAGAAA	-37
PB.4554.4	chr16	-	2102	1	full-splice_match	BCAR1	ENST00000546196.2	1340	1	-763	1	29	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-22	True	NA	NA
PB.6406.21	chr2	+	1854	13	novel_not_in_catalog	RASGRP3	novel	4738	19	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	1388	junction_12	54791.39646118418	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	320	1609	85.0	0	True	NA	NA
PB.8609.6	chr3	-	7052	23	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	-60	-11	intron_retention	FALSE	canonical	1	3670	junction_22	90696.64745341614	NA	4	NA	TRUE	NA	NA	NA	C	coding	734	2205	267	2471	15.0	3907	False	AATAAA	-17
PB.8485.11	chr3	-	2855	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	43	818	8	-818	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	53	610	25.0	9	True	TATAAA	-18
PB.5957.1	chr19	-	2551	7	novel_not_in_catalog	ZNF829	novel	4977	6	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	13315.589314992993	NA	2	NA	TRUE	NA	NA	NA	B	coding	432	1299	365	1663	10.0	0	True	TATAAA	-20
PB.3182.10	chr13	+	3700	9	novel_not_in_catalog	CKAP2	novel	579	3	NA	NA	15	-4	any annotated donor/acceptor	FALSE	canonical	1	1131	junction_6	189490.7101692257	NA	6	NA	TRUE	NA	NA	NA	C	coding	504	1515	76	1590	30.0	2	True	AATAAA	-15
PB.5957.3	chr19	-	2951	7	novel_not_in_catalog	ZNF829	novel	4977	6	NA	NA	-18	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	14851.783152387985	NA	0	NA	TRUE	NA	NA	NA	B	coding	513	1542	86	1627	15.0	-1	True	TATAAA	-18
PB.5957.2	chr19	-	2734	7	novel_not_in_catalog	ZNF829	novel	4977	6	NA	NA	18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	12864.718898341049	NA	1	NA	TRUE	NA	NA	NA	B	coding	432	1299	153	1451	15.0	648	False	TATAAA	-19
PB.8485.12	chr3	-	2743	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	33	940	-2	-940	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	63	620	25.0	-1	True	AATAAA	-29
PB.6299.1	chr2	-	3184	1	incomplete-splice_match	MBOAT2	ENST00000305997.7	7751	13	147932	8	5261	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	ATTAAA	-9
PB.5856.1	chr19	-	1902	11	full-splice_match	TMEM161A	ENST00000587406.5	1923	11	16	5	-5	-5	multi-exon	FALSE	canonical	1	176968	junction_9	106957.53253305725	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	50	883	25.0	0	True	AATAAA	-20
PB.3281.1	chr13	+	3779	3	full-splice_match	CHAMP1	ENST00000361283.3	3975	3	191	5	-5	4	multi-exon	FALSE	canonical	1	56651	junction_1	34046.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	297	2735	15.0	-5	True	ATTAAA	-23
PB.11039.2	chr8	+	3834	3	full-splice_match	SLC25A37	ENST00000518881.5	3404	3	-103	-327	59	327	multi-exon	FALSE	canonical	1	731488	junction_2	161134.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	187	564	2578	3141	15.0	-9	True	AATAAA	-13
PB.3281.3	chr13	+	3761	3	full-splice_match	CHAMP1	ENST00000644294.1	810	3	-52	-2899	6	3	multi-exon	FALSE	canonical	1	7937	junction_2	24357.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	280	2718	20.0	-35	True	ATTAAA	-22
PB.3281.2	chr13	+	2350	3	full-splice_match	CHAMP1	ENST00000361283.3	3975	3	196	1429	0	-1420	multi-exon	FALSE	canonical	1	56651	junction_1	34046.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2058	292	2349	50.0	0	True	NA	NA
PB.3281.5	chr13	+	5530	3	full-splice_match	CHAMP1	ENST00000478022.3	615	3	-27	-4888	14	-1	multi-exon	FALSE	canonical	1	55799	junction_2	426.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	812	2439	2044	4482	5.0	-27	True	ATTAAA	-27
PB.3281.4	chr13	+	2980	3	full-splice_match	CHAMP1	ENST00000361283.3	3975	3	168	827	13	-818	multi-exon	FALSE	canonical	1	56651	junction_1	34046.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	320	2758	25.0	-28	True	AATAAA	-21
PB.5362.11	chr18	-	3863	3	incomplete-splice_match	YES1	ENST00000314574.4	4441	12	-29	26627	-1	3349	3prime_fragment	FALSE	canonical	1	135071	junction_2	11768.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	163	537	90.0	-26	True	NA	NA
PB.3281.6	chr13	+	3712	3	novel_in_catalog	CHAMP1	novel	3975	3	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	1	4403	junction_1	1767.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	231	2669	20.0	-25	True	ATTAAA	-22
PB.4383.6	chr16	-	3210	2	novel_in_catalog	ZNF629	novel	6087	3	NA	NA	-3	-3035	intron_retention	FALSE	canonical	1	45148	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	824	2475	502	2976	70.0	-18	True	NA	NA
PB.4383.5	chr16	-	3066	3	full-splice_match	ZNF629	ENST00000262525.5	6087	3	-3	3024	-3	-3024	multi-exon	FALSE	canonical	1	45148	junction_2	10901.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2610	212	2821	60.0	-18	True	TATAAA	-9
PB.4383.4	chr16	-	3381	3	full-splice_match	ZNF629	ENST00000262525.5	6087	3	-6	2712	-6	-2712	multi-exon	FALSE	canonical	1	45148	junction_2	10901.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	869	2610	215	2824	65.0	-21	True	NA	NA
PB.4383.3	chr16	-	2176	1	incomplete-splice_match	ZNF629	ENST00000262525.5	6087	3	6570	8	6570	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	6555	False	AATAAA	-14
PB.4383.2	chr16	-	6094	3	full-splice_match	ZNF629	ENST00000262525.5	6087	3	-14	7	-14	-7	multi-exon	FALSE	canonical	1	45148	junction_2	10901.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2610	223	2832	0.0	-29	False	AATAAA	-15
PB.4383.1	chr16	-	6253	2	novel_in_catalog	ZNF629	novel	6087	3	NA	NA	-18	-7	intron_retention	FALSE	canonical	1	45148	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	824	2475	517	2991	0.0	-33	False	AATAAA	-15
PB.8378.2	chr3	-	2603	10	novel_not_in_catalog	RUVBL1	novel	1113	5	NA	NA	0	-4327	any annotated donor/acceptor	FALSE	canonical	1	506	junction_1	327681.655830928	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	101	1300	15.0	-13	True	NA	NA
PB.864.11	chr1	-	3188	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	16	-1454	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	7	1	TRUE	NA	NA	NA	B	coding	276	831	87	917	15.0	15	False	NA	NA
PB.1150.7	chr1	-	2906	23	novel_in_catalog	NVL	novel	591	4	NA	NA	0	-14	no_combination_of_known_junctions	FALSE	canonical	1	2592	junction_19	78320.06794251816	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	379	2631	35.0	0	True	AATAAA	-37
PB.8392.11	chr3	-	1126	3	incomplete-splice_match	MBD4	ENST00000507208.1	2194	7	4	4540	-2	331	3prime_fragment	FALSE	canonical	1	361906	junction_2	31113.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	927	199	1125	75.0	-3	True	AAGAAA	-10
PB.8123.2	chr3	-	3229	23	novel_in_catalog	UBA7	novel	3299	24	NA	NA	-9	-4	no_combination_of_known_junctions	FALSE	canonical	1	61745	junction_7	113641.28681539053	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	169	3132	35.0	-10	True	NA	NA
PB.3075.1	chr13	+	2534	2	full-splice_match	PDX1	ENST00000381033.4	2501	2	-40	7	-40	-7	multi-exon	FALSE	canonical	1	13955	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	283	852	160	1011	25.0	0	True	AATAAA	-25
PB.1150.3	chr1	-	2796	22	novel_in_catalog	NVL	novel	591	4	NA	NA	-2	-10	no_combination_of_known_junctions	FALSE	canonical	1	1520	junction_3	58698.834930010235	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	24	2396	45.0	-11	True	AATAAA	-41
PB.12099.9	chrX	+	2564	11	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	902457	junction_1	292882.6733428251	NA	3	NA	TRUE	NA	NA	NA	C	coding	441	1326	87	1412	10.0	1	True	NA	NA
PB.12099.8	chrX	+	2946	9	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-1	2	intron_retention	FALSE	canonical	1	902457	junction_1	323608.3814632037	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	87	1148	10.0	1	True	NA	NA
PB.11438.9	chr9	+	4518	25	novel_not_in_catalog	JAK2	novel	2615	16	NA	NA	27	527	any annotated donor/acceptor	FALSE	canonical	1	9183	junction_1	50480.72469543243	NA	2	1	TRUE	NA	NA	NA	C	coding	1130	3393	416	3808	45.0	0	True	AATACA	-21
PB.12099.5	chrX	+	2049	13	novel_not_in_catalog	MAGED2	novel	2066	12	NA	NA	-13	2	intron_retention	FALSE	canonical	1	27084	junction_12	535329.4412871439	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	99	1925	10.0	-11	True	NA	NA
PB.12099.4	chrX	+	2647	11	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	902457	junction_1	321575.92335902574	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	101	1042	10.0	-13	True	NA	NA
PB.12099.7	chrX	+	2375	12	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-2	0	intron_retention	FALSE	canonical	1	902457	junction_1	306679.9244016067	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	88	1413	10.0	0	True	NA	NA
PB.12099.6	chrX	+	3541	7	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-2	0	intron_retention	FALSE	canonical	1	902457	junction_1	368052.14805000427	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	88	1149	10.0	0	True	NA	NA
PB.12099.1	chrX	+	2265	12	full-splice_match	MAGED2	ENST00000375053.6	2066	12	121	-320	-27	2	multi-exon	TRUE	canonical	1	902457	junction_1	279487.3529980109	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	113	1933	10.0	0	True	NA	NA
PB.12099.3	chrX	+	2065	13	full-splice_match	MAGED2	ENST00000375068.5	2189	13	131	-7	-17	2	multi-exon	FALSE	canonical	1	902457	junction_1	294453.3554092109	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	103	1923	10.0	-15	True	NA	NA
PB.12099.2	chrX	+	1957	14	novel_not_in_catalog	MAGED2	novel	2066	12	NA	NA	-21	2	intron_retention	FALSE	canonical	0	0	junction_3	526774.5650224503	NA	1	1	TRUE	NA	NA	NA	C	coding	489	1470	346	1815	10.0	-6958	False	NA	NA
PB.4136.3	chr16	+	2835	15	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	-9	7	intron_retention	FALSE	canonical	1	586393	junction_6	159391.29039172686	NA	1	1	TRUE	NA	NA	NA	C	coding	280	843	1012	1854	35.0	-36	True	ATTAAA	-26
PB.5774.1	chr19	-	2764	8	novel_in_catalog	C19orf57	novel	718	3	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	8167	junction_1	7304.143381027801	NA	0	NA	TRUE	NA	NA	NA	A	coding	637	1914	404	2317	5.0	-1	True	AATAAA	-16
PB.3704.1	chr14	-	4165	14	full-splice_match	BRF1	ENST00000392557.8	3579	14	-589	3	56	0	multi-exon	FALSE	canonical	1	16427	junction_13	78914.70824059495	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	1482	2903	20.0	-9	True	AGTAAA	-28
PB.3598.10	chr14	-	2236	9	full-splice_match	GTF2A1	ENST00000553612.5	6306	9	-8	4078	-8	648	multi-exon	FALSE	canonical	1	208510	junction_1	22675.72992451125	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	413	1543	10.0	459	False	ATTAAA	-15
PB.11646.38	chr9	-	4350	34	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_1	364357.5456964483	NA	8	1	TRUE	NA	NA	NA	C	coding	1310	3933	92	4024	40.0	0	True	AATAAA	-13
PB.3704.2	chr14	-	3418	18	full-splice_match	BRF1	ENST00000547530.6	3358	18	-63	3	-26	0	multi-exon	FALSE	canonical	1	120269	junction_16	64840.25987531945	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	123	2156	20.0	533	False	AGTAAA	-28
PB.11438.8	chr9	+	2477	1	novel_in_catalog	JAK2	novel	2615	16	NA	NA	13	-34331	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-14	True	NA	NA
PB.3528.20	chr14	+	3120	6	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	0	intron_retention	FALSE	canonical	1	544887	junction_1	1753117.9602213195	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	2140	2577	5.0	0	True	AATAAA	-14
PB.3295.2	chr14	-	2015	15	full-splice_match	NDRG2	ENST00000554143.5	1980	15	-27	-8	7	-1	multi-exon	FALSE	canonical	1	142411	junction_14	555586.953445711	NA	10	NA	TRUE	NA	NA	NA	C	coding	357	1074	111	1184	15.0	9674	False	AATAAA	-24
PB.3295.3	chr14	-	2077	17	full-splice_match	NDRG2	ENST00000397853.7	2079	17	1	1	0	0	multi-exon	FALSE	canonical	1	223844	junction_16	583641.9091364176	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	139	1254	20.0	9713	False	AATAAA	-16
PB.11646.30	chr9	-	5422	32	novel_in_catalog	IARS	novel	4656	34	NA	NA	2	2	intron_retention	FALSE	canonical	1	5381	junction_13	385450.74203059124	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	3411	4958	40.0	2	True	AATAAA	-14
PB.3295.1	chr14	-	2055	16	novel_in_catalog	NDRG2	novel	2122	17	NA	NA	1	0	intron_retention	FALSE	canonical	1	223844	junction_15	566488.3065702788	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	150	1223	15.0	9702	False	AATAAA	-25
PB.11646.36	chr9	-	4566	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-18	1	intron_retention	FALSE	canonical	1	13050	junction_16	420774.2874153189	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	2250	4103	40.0	-1	True	AATAAA	-13
PB.11646.37	chr9	-	4418	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	0	1	intron_retention	FALSE	canonical	1	17254	junction_6	398118.4885809925	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	93	3143	40.0	-1	True	AATAAA	-13
PB.3295.4	chr14	-	2010	16	full-splice_match	NDRG2	ENST00000397851.6	2022	16	11	1	0	-1	multi-exon	FALSE	canonical	1	142411	junction_15	579491.4985848425	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	73	1188	20.0	9712	False	AATAAA	-15
PB.11004.9	chr8	-	3711	9	novel_not_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	32	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	62255.03228454709	NA	8	1	TRUE	NA	NA	NA	B	coding	530	1593	502	2094	25.0	1	True	AATAAA	-18
PB.642.2	chr1	-	7263	12	full-splice_match	IGSF3	ENST00000369483.5	7326	12	48	15	46	-5	multi-exon	FALSE	canonical	1	23493	junction_6	50616.91302191164	NA	17	NA	TRUE	NA	NA	NA	C	coding	1214	3645	721	4365	35.0	-1	True	AGTAAA	-9
PB.642.3	chr1	-	7261	11	full-splice_match	IGSF3	ENST00000369486.7	7254	11	-12	5	-10	-5	multi-exon	FALSE	canonical	1	62188	junction_10	40101.81376945437	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	779	4363	35.0	-59	False	AGTAAA	-9
PB.642.6	chr1	-	7283	12	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	283	-5	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_11	56847.780840991974	NA	0	NA	TRUE	NA	NA	NA	C	coding	1214	3645	741	4385	35.0	-3	True	AGTAAA	-9
PB.642.5	chr1	-	7261	11	novel_not_in_catalog	IGSF3	novel	7326	12	NA	NA	245	-5	any annotated donor/acceptor	FALSE	canonical	1	4379	junction_10	49866.38441966692	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	779	4363	35.0	198	False	AGTAAA	-9
PB.3048.2	chr13	+	2272	4	full-splice_match	SAP18	ENST00000621421.4	2300	4	28	0	28	0	multi-exon	FALSE	canonical	1	1503500	junction_2	1107606.4997709652	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	69	530	15.0	-4	True	AATAAA	-21
PB.3048.3	chr13	+	787	4	full-splice_match	SAP18	ENST00000382533.8	2298	4	32	1479	32	0	multi-exon	FALSE	canonical	1	1503500	junction_2	1107606.4997709652	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	65	526	30.0	0	True	AATATA	-14
PB.6708.16	chr2	+	6038	13	novel_in_catalog	DDX18	novel	3796	14	NA	NA	62	-3	intron_retention	FALSE	canonical	1	151172	junction_11	118223.9959794718	NA	3	NA	TRUE	NA	NA	NA	C	coding	357	1074	67	1140	15.0	0	True	NA	NA
PB.3048.1	chr13	+	1541	4	full-splice_match	SAP18	ENST00000382533.8	2298	4	27	730	27	-730	multi-exon	FALSE	canonical	1	1503500	junction_2	1107606.4997709652	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	70	531	45.0	-5	True	NA	NA
PB.3528.21	chr14	+	2829	7	full-splice_match	SRSF5	ENST00000556184.5	2443	7	-30	-356	-15	-6	multi-exon	FALSE	canonical	1	544887	junction_1	1600539.914099449	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1855	2292	25.0	0	True	AATAAA	-8
PB.6708.11	chr2	+	3549	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	41	206	41	-197	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	88	2100	70.0	-21	True	NA	NA
PB.3048.4	chr13	+	2019	4	full-splice_match	SAP18	ENST00000382533.8	2298	4	32	247	32	-247	multi-exon	FALSE	canonical	1	1503500	junction_2	1107606.4997709652	NA	2	NA	TRUE	NA	NA	NA	C	coding	153	462	65	526	15.0	0	True	AATAAA	-15
PB.3623.4	chr14	-	3024	11	full-splice_match	ATXN3	ENST00000558190.6	6927	11	30	3873	-4	361	multi-exon	FALSE	canonical	1	144590	junction_10	73039.93296279783	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	44	1129	40.0	-32	True	ATTAAA	-16
PB.9500.4	chr5	+	2712	19	novel_in_catalog	IK	novel	569	5	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_14	306852.55608146463	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	86	1510	15.0	-5	True	ATTAAA	-15
PB.9500.1	chr5	+	1890	20	full-splice_match	IK	ENST00000417647.6	1962	20	73	-1	1	0	multi-exon	FALSE	non_canonical	0	0	junction_14	304827.8063757933	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	67	1740	15.0	14	True	ATTAAA	-16
PB.6708.19	chr2	+	2213	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	74	1509	74	-1500	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	55	2067	15.0	12	True	TATAAA	-31
PB.9500.3	chr5	+	2011	21	novel_in_catalog	IK	novel	569	5	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_3	313809.307994935	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	180	1862	15.0	-10	True	ATTAAA	-15
PB.9500.2	chr5	+	2197	19	novel_in_catalog	IK	novel	569	5	NA	NA	-13	0	intron_retention	FALSE	canonical	1	787	junction_3	299384.78770431236	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	94	1383	15.0	-13	True	ATTAAA	-16
PB.10866.12	chr7	+	4162	29	incomplete-splice_match	NUP205	ENST00000285968.10	6266	43	40077	16	256	-8	5prime_fragment	FALSE	canonical	1	318850	junction_4	127006.08300394051	NA	0	NA	TRUE	NA	NA	NA	C	coding	1207	3624	354	3977	75.0	NA	False	AATAAA	-9
PB.408.4	chr1	-	3440	25	novel_not_in_catalog	CC2D1B	novel	728	4	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	canonical	1	8736	junction_10	82553.37941967836	NA	5	2	TRUE	NA	NA	NA	C	coding	600	1803	155	1957	30.0	-29	True	TATAAA	-10
PB.408.5	chr1	-	3360	25	full-splice_match	CC2D1B	ENST00000284376.7	3377	25	16	1	-7	-1	multi-exon	FALSE	canonical	1	159179	junction_21	55433.73871093508	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	113	2668	30.0	13	True	TATAAA	-10
PB.408.2	chr1	-	3732	24	novel_in_catalog	CC2D1B	novel	728	4	NA	NA	1	-1	intron_retention	FALSE	canonical	1	159300	junction_22	53770.354296367615	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	1409	3040	30.0	21	True	TATAAA	-10
PB.408.3	chr1	-	3644	24	novel_in_catalog	CC2D1B	novel	728	4	NA	NA	3	-1	intron_retention	FALSE	canonical	1	159179	junction_20	56481.09288953445	NA	1	NA	TRUE	NA	NA	NA	C	coding	851	2556	103	2658	30.0	23	True	TATAAA	-10
PB.408.1	chr1	-	3390	25	novel_in_catalog	CC2D1B	novel	728	4	NA	NA	9	10	combination_of_known_junctions	FALSE	canonical	1	20549	junction_21	69305.8351294684	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	1056	2687	35.0	29	True	TATAAA	-21
PB.7255.2	chr20	-	4386	10	novel_in_catalog	GSS	novel	1554	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	428727	junction_9	120997.41058478162	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	758	1519	20.0	-6	True	AATAAA	-17
PB.7255.3	chr20	-	2658	11	novel_in_catalog	GSS	novel	1554	10	NA	NA	3	-1	intron_retention	FALSE	canonical	1	428727	junction_10	116421.15034545914	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	775	1695	20.0	-23	True	AATAAA	-17
PB.6923.7	chr2	-	2571	13	novel_in_catalog	HSPD1	novel	2455	12	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	6959	junction_11	854317.7903304021	NA	108	9	TRUE	NA	NA	NA	C	coding	573	1722	390	2111	30.0	-6	True	AATAAA	-16
PB.7255.1	chr20	-	2365	12	novel_in_catalog	GSS	novel	1554	10	NA	NA	4	1	intron_retention	FALSE	canonical	1	428727	junction_11	111718.89427169094	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	96	1400	15.0	-31	True	AATAAA	-19
PB.7255.6	chr20	-	1883	13	full-splice_match	GSS	ENST00000216951.7	1919	13	35	1	1	-1	multi-exon	FALSE	canonical	1	428727	junction_12	115952.6607967845	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	65	1489	20.0	0	True	AATAAA	-17
PB.7255.7	chr20	-	2175	13	full-splice_match	GSS	ENST00000642498.1	2131	13	-6	-38	-1	-2	multi-exon	FALSE	canonical	1	6222	junction_1	203778.2898591254	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	72	1424	20.0	-7	True	AATAAA	-16
PB.7255.4	chr20	-	2220	12	novel_in_catalog	GSS	novel	1554	10	NA	NA	1	-1	intron_retention	FALSE	canonical	1	428727	junction_11	120822.31286261273	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	786	1826	20.0	-34	True	AATAAA	-17
PB.7255.5	chr20	-	2120	11	novel_in_catalog	GSS	novel	1554	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	7996	junction_4	224425.49225435598	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	1247	1726	20.0	-1	True	AATAAA	-17
PB.8123.6	chr3	-	3522	22	novel_in_catalog	UBA7	novel	3299	24	NA	NA	19	-4	intron_retention	FALSE	canonical	1	218365	junction_14	92370.83562106242	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	127	1326	35.0	32	True	NA	NA
PB.3736.8	chr15	-	3045	23	novel_in_catalog	OCA2	novel	3068	23	NA	NA	-4	-5	no_combination_of_known_junctions	FALSE	canonical	1	138	junction_1	5737.578944882617	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	115	2469	30.0	-8	True	AATAAA	-12
PB.50.2	chr1	-	1982	4	full-splice_match	RPL22	ENST00000234875.8	2078	4	17	79	17	-79	multi-exon	FALSE	canonical	1	4342	junction_1	1464617.2972769674	NA	0	NA	TRUE	NA	NA	NA	A	coding	128	387	23	409	15.0	-2	True	AATAAA	-22
PB.3772.3	chr15	-	4527	3	novel_not_in_catalog	BMF	novel	4687	5	NA	NA	777	-1	intron_retention	FALSE	canonical	1	3393	junction_2	45860.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	131	396	1299	1694	20.0	3599	False	AATAAA	-12
PB.3736.2	chr15	-	3272	24	novel_not_in_catalog	OCA2	novel	3068	23	NA	NA	-4	-4	any annotated donor/acceptor	FALSE	canonical	1	265	junction_5	7202.2885632418365	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	115	2763	30.0	-8	True	AATAAA	-13
PB.3736.3	chr15	-	3142	24	full-splice_match	OCA2	ENST00000354638.7	3186	24	40	4	-6	-4	multi-exon	FALSE	canonical	1	13139	junction_15	3823.9201675787017	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	117	2633	30.0	-10	True	AATAAA	-13
PB.3736.1	chr15	-	3112	24	novel_not_in_catalog	OCA2	novel	3068	23	NA	NA	-5	-3	any annotated donor/acceptor	TRUE	canonical	1	1478	junction_4	6984.6896598641	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	116	2602	30.0	-9	True	AATAAA	-14
PB.3736.6	chr15	-	2940	21	novel_in_catalog	OCA2	novel	3068	23	NA	NA	5	-4	no_combination_of_known_junctions	FALSE	canonical	1	2085	junction_3	6161.0563532157375	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	152	2431	30.0	-45	False	AATAAA	-13
PB.3736.7	chr15	-	3068	23	full-splice_match	OCA2	ENST00000353809.9	3068	23	-5	5	-5	-5	multi-exon	FALSE	canonical	1	7367	junction_14	4446.850185503673	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	116	2560	30.0	-9	True	AATAAA	-12
PB.3736.4	chr15	-	3057	23	novel_not_in_catalog	OCA2	novel	3068	23	NA	NA	-19	-4	any annotated donor/acceptor	FALSE	canonical	1	97	junction_1	8749.698818901574	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	130	2379	30.0	-23	False	AATAAA	-13
PB.3736.5	chr15	-	2975	22	novel_in_catalog	OCA2	novel	3068	23	NA	NA	-4	-4	no_combination_of_known_junctions	FALSE	canonical	1	2085	junction_3	5614.607581952609	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	115	2466	30.0	-8	True	AATAAA	-13
PB.3772.1	chr15	-	4746	5	full-splice_match	BMF	ENST00000354670.8	4687	5	-62	3	-44	0	multi-exon	FALSE	canonical	1	27369	junction_4	27757.605699834774	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	298	852	20.0	-28	False	AATAAA	-13
PB.9969.8	chr6	+	3979	24	full-splice_match	CMTR1	ENST00000373451.8	4033	24	54	0	54	0	multi-exon	FALSE	canonical	1	241166	junction_1	59111.50110696812	NA	24	3	TRUE	NA	NA	NA	C	coding	835	2508	111	2618	10.0	2	True	ATTAAA	-16
PB.9969.9	chr6	+	2845	24	novel_in_catalog	CMTR1	novel	457	4	NA	NA	53	23	combination_of_known_junctions	FALSE	canonical	1	10009	junction_23	97893.14948551208	NA	1	NA	TRUE	NA	NA	NA	C	coding	803	2412	112	2523	5.0	1	True	NA	NA
PB.9969.6	chr6	+	3894	23	novel_in_catalog	CMTR1	novel	457	4	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	13272	junction_11	99131.72432435876	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	1511	2533	10.0	3	True	ATTAAA	-16
PB.3772.6	chr15	-	4088	2	novel_not_in_catalog	BMF	novel	4687	5	NA	NA	1055	-1	intron_retention	FALSE	canonical	1	531	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	860	1255	20.0	3877	False	AATAAA	-12
PB.9969.4	chr6	+	4061	24	novel_not_in_catalog	CMTR1	novel	457	4	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	346	junction_23	99476.24876309579	NA	1	NA	TRUE	NA	NA	NA	C	coding	846	2541	160	2700	10.0	2	True	ATTAAA	-16
PB.6030.3	chr19	-	2211	1	novel_in_catalog	AC006486.1	novel	634	5	NA	NA	5355	-12984	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	279	840	474	1313	25.0	5379	False	AATAAA	-19
PB.6030.4	chr19	-	2582	4	novel_not_in_catalog	AC006486.1	novel	634	5	NA	NA	-34	-12988	any annotated donor/acceptor	FALSE	canonical	1	3384	junction_3	266629.76690659777	NA	3	1	TRUE	NA	NA	NA	B	coding	473	1422	267	1688	25.0	-10	True	AATAAA	-15
PB.9969.3	chr6	+	3180	24	full-splice_match	CMTR1	ENST00000373451.8	4033	24	2	851	2	-851	multi-exon	FALSE	canonical	1	241166	junction_1	59111.50110696812	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	163	2670	20.0	-1	True	TATAAA	-23
PB.9969.1	chr6	+	4539	24	novel_in_catalog	CMTR1	novel	457	4	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	1	24667	junction_19	94826.46746962308	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	166	2292	5.0	-4	True	ATTAAA	-17
PB.3772.5	chr15	-	4559	4	novel_in_catalog	BMF	novel	4687	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	3979	junction_3	41066.125318401624	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	112	666	20.0	-6	True	AATAAA	-12
PB.7859.1	chr22	+	2932	17	full-splice_match	FBLN1	ENST00000327858.10	2896	17	-37	1	22	-1	multi-exon	FALSE	canonical	1	336263	junction_1	509254.7045822055	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	133	2244	20.0	-29	False	AATAAA	-20
PB.7859.2	chr22	+	2279	15	full-splice_match	FBLN1	ENST00000262722.11	2251	15	-29	1	22	-1	multi-exon	FALSE	canonical	1	336263	junction_1	448208.7142884007	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	133	2184	5.0	-29	False	AATAAA	-26
PB.11673.13	chr9	+	4442	22	novel_in_catalog	NCBP1	novel	5178	23	NA	NA	-98	1553	intron_retention	FALSE	canonical	1	196058	junction_1	118935.69305634729	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	1961	4012	30.0	-2	True	AATAAA	-19
PB.11128.3	chr8	-	6135	24	novel_not_in_catalog	RB1CC1	novel	6635	24	NA	NA	-8	-432	any annotated donor/acceptor	FALSE	canonical	1	8557	junction_20	110338.87345635785	NA	1	NA	TRUE	NA	NA	NA	C	coding	1515	4548	697	5244	25.0	-18	True	AATAAA	-13
PB.10588.10	chr7	-	1733	11	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	174	junction_9	98862.53276929537	NA	0	NA	TRUE	NA	NA	NA	B	coding	201	606	699	1304	30.0	NA	False	AATAAA	-16
PB.5131.5	chr17	+	3257	12	novel_in_catalog	AKAP1	novel	650	2	NA	NA	99	0	intron_retention	FALSE	canonical	1	2193	junction_1	238432.53689017423	NA	1	NA	TRUE	NA	NA	NA	C	coding	903	2712	300	3011	90.0	10	True	NA	NA
PB.7185.2	chr20	-	3680	24	novel_not_in_catalog	RRBP1	novel	2200	6	NA	NA	422	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_23	319627.6646405336	NA	1	1	TRUE	NA	NA	NA	B	coding	751	2256	923	3178	0.0	925	False	ATTAAA	-19
PB.11181.2	chr8	-	1295	2	full-splice_match	MSC	ENST00000325509.4	2023	2	707	21	-348	-21	multi-exon	FALSE	canonical	1	380834	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-33
PB.11181.3	chr8	-	2453	1	novel_in_catalog	MSC	novel	2023	2	NA	NA	446	-21	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	105	318	202	519	25.0	-1	True	AATAAA	-33
PB.3598.11	chr14	-	1599	9	full-splice_match	GTF2A1	ENST00000553612.5	6306	9	-42	4749	-12	8	multi-exon	FALSE	canonical	1	208510	junction_1	22675.72992451125	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	447	1577	75.0	-6	True	NA	NA
PB.11298.11	chr8	+	1656	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	24	-437	11	431	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	12	905	25.0	11	True	ATTAAA	-21
PB.6783.1	chr2	+	4012	15	novel_not_in_catalog	FMNL2	novel	5575	26	NA	NA	-2419	1	any annotated donor/acceptor	FALSE	canonical	1	121292	junction_2	95759.53133572529	NA	1	NA	TRUE	NA	NA	NA	A	coding	660	1983	2	1984	30.0	-5672	False	AATAAA	-14
PB.11780.5	chr9	+	1983	12	novel_not_in_catalog	NEK6	novel	2578	10	NA	NA	-34	-981	any annotated donor/acceptor	FALSE	canonical	1	2489	junction_1	300468.05092548305	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	430	1473	25.0	-22	True	GATAAA	-24
PB.1132.20	chr1	-	4320	34	novel_not_in_catalog	RAB3GAP2	novel	7257	35	NA	NA	2	86	any annotated donor/acceptor	FALSE	canonical	1	2221	junction_28	74950.89039569469	NA	1	NA	TRUE	NA	NA	NA	C	coding	973	2922	1245	4166	30.0	1	True	AATAAA	-29
PB.2545.1	chr12	-	5981	10	full-splice_match	ABCD2	ENST00000308666.3	6238	10	-64	321	-64	-321	multi-exon	TRUE	canonical	1	18510	junction_5	5527.516299790028	NA	3	NA	TRUE	NA	NA	NA	C	coding	740	2223	201	2423	30.0	-13	True	AATATA	-18
PB.2545.3	chr12	-	3613	10	full-splice_match	ABCD2	ENST00000308666.3	6238	10	-88	2713	-88	-2713	multi-exon	FALSE	canonical	1	18510	junction_5	5527.516299790028	NA	1	NA	TRUE	NA	NA	NA	C	coding	740	2223	225	2447	15.0	137	False	AATAAA	-42
PB.2545.2	chr12	-	4481	10	full-splice_match	ABCD2	ENST00000308666.3	6238	10	-61	1818	-61	-1818	multi-exon	FALSE	canonical	1	18510	junction_5	5527.516299790028	NA	2	NA	TRUE	NA	NA	NA	C	coding	740	2223	198	2420	65.0	-10	True	NA	NA
PB.38.17	chr1	+	4174	6	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	60768	junction_4	195361.141619924	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	1854	2708	5.0	28	True	NA	NA
PB.5131.4	chr17	+	5947	10	novel_in_catalog	AKAP1	novel	650	2	NA	NA	90	0	intron_retention	FALSE	canonical	1	60999	junction_1	191064.74534998424	NA	19	NA	TRUE	NA	NA	NA	C	coding	606	1821	144	1964	90.0	1	True	NA	NA
PB.3784.1	chr15	+	2909	10	incomplete-splice_match	ZFYVE19	ENST00000564258.5	2059	11	597	0	9	0	5prime_fragment	FALSE	canonical	1	175119	junction_5	46162.23714517001	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	1680	2570	15.0	28	True	AATAAA	-15
PB.4768.10	chr17	+	2936	10	novel_not_in_catalog	NDEL1	novel	588	5	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	208156.36212256103	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	771	1808	50.0	-2	True	AATAAA	-7
PB.3784.3	chr15	+	1622	11	full-splice_match	ZFYVE19	ENST00000355341.8	2775	11	638	515	-7	0	multi-exon	FALSE	canonical	1	115243	junction_1	66293.79073948028	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	89	1279	25.0	-24	True	AATAAA	-19
PB.3784.2	chr15	+	4384	5	novel_in_catalog	ZFYVE19	novel	1669	12	NA	NA	-16	-357	intron_retention	FALSE	canonical	1	270115	junction_1	28791.906001296615	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	2296	2730	90.0	-19	True	NA	NA
PB.3784.5	chr15	+	2955	9	novel_in_catalog	ZFYVE19	novel	1669	12	NA	NA	9	-1	intron_retention	FALSE	canonical	1	175119	junction_4	48545.38593017234	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	1756	2613	20.0	-8	True	AATAAA	-18
PB.3784.4	chr15	+	2752	9	novel_in_catalog	ZFYVE19	novel	1669	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	77545	junction_5	77674.77979521007	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	1723	2409	25.0	-15	True	AATAAA	-19
PB.6884.5	chr2	+	4192	24	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-21	-93	intron_retention	FALSE	canonical	1	74487	junction_11	193464.17468998328	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	437	1435	20.0	-9	True	AGTAAA	-27
PB.12023.2	chrX	+	4920	18	novel_not_in_catalog	AF241726.2	novel	954	9	NA	NA	556632	-558860	any annotated donor/acceptor	FALSE	canonical	1	3176	junction_1	7486.538508374229	NA	1	1	TRUE	NA	NA	NA	B	coding	730	2193	644	2836	15.0	-545	False	AATAAA	-20
PB.4866.1	chr17	-	6429	39	novel_in_catalog	MYO18A	novel	9992	42	NA	NA	-6	-1	intron_retention	TRUE	canonical	0	0	junction_30	154281.1413305179	NA	2	NA	TRUE	NA	NA	NA	B	coding	1285	3858	1322	5179	5.0	-7	True	AATAAA	-18
PB.6884.6	chr2	+	4947	24	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-19	664	intron_retention	FALSE	canonical	1	74487	junction_11	193464.17468998328	NA	3	NA	TRUE	NA	NA	NA	C	coding	332	999	435	1433	40.0	-7	True	ATTAAA	-19
PB.6884.1	chr2	+	4171	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	1	15957	1	662	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	137	10	TRUE	NA	NA	NA	C	coding	793	2382	415	2796	45.0	13	True	ATTAAA	-17
PB.4866.5	chr17	-	6062	39	novel_in_catalog	MYO18A	novel	9992	42	NA	NA	1	839	intron_retention	FALSE	canonical	0	0	junction_29	163218.21263727563	NA	1	NA	TRUE	NA	NA	NA	B	coding	1206	3618	2445	6062	60.0	-26	True	NA	NA
PB.12023.3	chrX	+	4816	17	novel_not_in_catalog	AF241726.2	novel	954	9	NA	NA	556635	-558864	any annotated donor/acceptor	FALSE	canonical	1	361	junction_1	6612.740961760392	NA	4	1	TRUE	NA	NA	NA	B	coding	730	2193	544	2736	15.0	-542	False	AATAAA	-16
PB.1192.1	chr1	-	3701	4	full-splice_match	C1orf198	ENST00000366663.9	3858	4	101	56	101	-55	multi-exon	FALSE	canonical	1	300289	junction_3	36754.306885951024	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	86	1024	35.0	1038	False	AATAAA	-18
PB.1192.2	chr1	-	3689	5	novel_not_in_catalog	C1orf198	novel	3858	4	NA	NA	102	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	153480.9990363221	NA	2	NA	TRUE	NA	NA	NA	C	coding	312	939	85	1023	10.0	1039	False	AATAAA	-17
PB.1192.3	chr1	-	2432	4	full-splice_match	C1orf198	ENST00000366663.9	3858	4	114	1312	114	1190	multi-exon	FALSE	canonical	1	300289	junction_3	36754.306885951024	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	73	1011	25.0	-19	True	AATAAA	-20
PB.6630.17	chr2	-	4558	2	full-splice_match	STARD7	ENST00000488084.1	384	2	-643	-3531	1	1404	multi-exon	FALSE	canonical	1	783379	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	391	924	95.0	2	True	NA	NA
PB.6884.8	chr2	+	4762	22	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-17	663	intron_retention	FALSE	canonical	1	3254	junction_9	210865.98038007645	NA	2	NA	TRUE	NA	NA	NA	C	coding	283	852	433	1284	45.0	-5	True	ATTAAA	-18
PB.1273.8	chr10	-	1630	5	novel_in_catalog	KLF6	novel	764	3	NA	NA	22	-19	combination_of_known_junctions	FALSE	canonical	1	12401	junction_4	578447.3916400587	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	140	478	85.0	1263	False	NA	NA
PB.4441.3	chr16	+	2645	22	novel_not_in_catalog	NUP93	novel	2741	22	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1302	junction_16	215091.39435893256	NA	12	1	TRUE	NA	NA	NA	C	coding	618	1857	98	1954	20.0	-22	True	AATAAA	-15
PB.11674.4	chr9	-	4292	10	full-splice_match	TSTD2	ENST00000341170.4	4320	10	24	4	24	-4	multi-exon	FALSE	canonical	1	71077	junction_8	27048.167990722053	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	360	1910	40.0	-65	False	AATAAA	-18
PB.12023.1	chrX	+	4240	16	novel_not_in_catalog	AF241726.2	novel	954	9	NA	NA	556305	-558859	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	6888.86517859719	NA	2	1	TRUE	NA	NA	NA	B	coding	446	1341	815	2155	20.0	-872	False	AATAAA	-21
PB.4441.6	chr16	+	3847	21	novel_in_catalog	NUP93	novel	2741	22	NA	NA	1	0	intron_retention	FALSE	canonical	1	367686	junction_6	172224.53734125695	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	2259	3692	20.0	-1	True	AATAAA	-15
PB.4441.7	chr16	+	3712	20	novel_in_catalog	NUP93	novel	2741	22	NA	NA	2	0	intron_retention	FALSE	canonical	1	190	junction_8	218233.43491834702	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	2125	3558	20.0	0	True	AATAAA	-14
PB.4441.4	chr16	+	2520	21	novel_in_catalog	NUP93	novel	2741	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	6463	junction_1	217350.31978018806	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	274	2364	15.0	-22	True	AATAAA	-16
PB.4441.5	chr16	+	2632	22	novel_not_in_catalog	NUP93	novel	2741	22	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	2978	junction_10	213459.0638564917	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	96	1148	20.0	-20	True	AATAAA	-14
PB.11754.9	chr9	-	2529	8	novel_not_in_catalog	FBXW2	novel	2154	4	NA	NA	0	-6603	any annotated donor/acceptor	FALSE	canonical	1	66956	junction_7	138530.78274506063	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	183	1547	55.0	-9	True	AATGAA	-33
PB.1273.1	chr10	-	1434	4	full-splice_match	KLF6	ENST00000497571.5	4656	4	152	3070	60	-19	multi-exon	FALSE	canonical	1	1023501	junction_3	83215.36282175037	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	110	961	85.0	1393	False	NA	NA
PB.4441.8	chr16	+	2666	22	full-splice_match	NUP93	ENST00000308159.9	2741	22	70	5	26	0	multi-exon	FALSE	canonical	1	367686	junction_6	171365.6921225996	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	52	2511	20.0	24	True	AATAAA	-15
PB.4441.9	chr16	+	2057	15	incomplete-splice_match	NUP93	ENST00000564887.5	2875	20	41963	-10	-7894	5	5prime_fragment	FALSE	canonical	1	403132	junction_1	160054.2953235889	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	99	1892	20.0	-6939	False	AATAAA	-25
PB.1273.4	chr10	-	6151	1	novel_in_catalog	KLF6	novel	4656	4	NA	NA	-23	-19	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	273	822	2925	3746	85.0	1300	False	NA	NA
PB.1273.5	chr10	-	3450	2	full-splice_match	KLF6	ENST00000469435.1	2169	2	-20	-1261	-20	-19	multi-exon	FALSE	canonical	1	1023501	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	200	1045	85.0	-5	True	NA	NA
PB.1273.6	chr10	-	2955	3	novel_in_catalog	KLF6	novel	764	3	NA	NA	-40	-19	intron_retention	FALSE	canonical	1	1023501	junction_2	101857.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	220	1065	85.0	-3	True	NA	NA
PB.1273.7	chr10	-	2035	3	novel_in_catalog	KLF6	novel	764	3	NA	NA	-16	-19	intron_retention	FALSE	canonical	1	1023501	junction_2	47885.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	196	1065	85.0	-1	True	NA	NA
PB.9580.5	chr5	-	2841	15	full-splice_match	FAM114A2	ENST00000520667.5	2121	15	11	-731	0	-65	multi-exon	FALSE	canonical	1	5208	junction_13	69492.56174143932	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	116	1633	20.0	-1	True	AATAAA	-15
PB.9580.4	chr5	-	2748	13	novel_not_in_catalog	FAM114A2	novel	4443	14	NA	NA	-4	-64	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	77539.86640266448	NA	4	1	TRUE	NA	NA	NA	C	coding	324	975	102	1076	20.0	-16	True	AATAAA	-16
PB.9580.7	chr5	-	2077	14	full-splice_match	FAM114A2	ENST00000351797.8	4443	14	-2	2368	0	3	multi-exon	FALSE	canonical	1	77427	junction_13	44082.693822126894	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	80	1597	35.0	-12	True	AATAAA	-23
PB.9580.6	chr5	-	4184	14	novel_in_catalog	FAM114A2	novel	4443	14	NA	NA	5	3	intron_retention	FALSE	canonical	1	2365	junction_13	59653.76721226736	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	2187	3704	35.0	16	True	AATAAA	-23
PB.9580.1	chr5	-	2949	15	novel_in_catalog	FAM114A2	novel	4443	14	NA	NA	0	-63	combination_of_known_junctions	TRUE	canonical	1	22022	junction_14	65583.9687610782	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	222	1739	20.0	-12	True	AATAAA	-17
PB.12023.4	chrX	+	3701	19	novel_not_in_catalog	AF241726.2	novel	954	9	NA	NA	556673	-560177	any annotated donor/acceptor	FALSE	canonical	1	2780	junction_2	8364.70188398993	NA	0	NA	TRUE	NA	NA	NA	B	coding	730	2193	742	2934	35.0	-8	True	TATAAA	-44
PB.10656.8	chr7	+	2250	11	novel_not_in_catalog	GTPBP10	novel	778	7	NA	NA	1	-1248	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	85441.11681907019	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	35	1198	40.0	-8	True	AATAAA	-15
PB.10656.9	chr7	+	3992	3	incomplete-splice_match	GTPBP10	ENST00000417207.5	775	8	16	26746	4	4959	3prime_fragment	FALSE	canonical	1	152199	junction_2	8740.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	32	427	75.0	-5	True	NA	NA
PB.10656.6	chr7	+	2400	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	24	5107	-2	458	multi-exon	FALSE	canonical	1	133354	junction_4	59149.77586966918	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	43	1206	35.0	-16	True	AGTAAA	-16
PB.10656.7	chr7	+	1233	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	26	6272	0	107	multi-exon	FALSE	canonical	1	133354	junction_4	59149.77586966918	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	41	1204	50.0	-14	True	ATTAAA	-20
PB.10656.4	chr7	+	3235	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	15	4281	-4	1284	multi-exon	FALSE	canonical	1	133354	junction_4	59149.77586966918	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	52	1215	55.0	-25	True	NA	NA
PB.12023.5	chrX	+	4831	18	novel_not_in_catalog	AF241726.2	novel	954	9	NA	NA	556733	-558859	any annotated donor/acceptor	FALSE	canonical	1	1716	junction_1	7706.303402057791	NA	3	NA	TRUE	NA	NA	NA	B	coding	730	2193	554	2746	20.0	0	True	AATAAA	-21
PB.10656.2	chr7	+	2969	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	0	4562	0	1003	multi-exon	FALSE	canonical	1	133354	junction_4	59149.77586966918	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	67	1230	15.0	-40	True	AATAAA	-15
PB.7185.1	chr20	-	4352	24	novel_not_in_catalog	RRBP1	novel	2200	6	NA	NA	21	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	288422.9310626585	NA	7	1	TRUE	NA	NA	NA	B	coding	681	2046	1803	3848	0.0	-21	True	ATTAAA	-21
PB.10656.1	chr7	+	2138	10	full-splice_match	GTPBP10	ENST00000222511.10	7531	10	-2	5395	-2	170	multi-exon	TRUE	canonical	1	133354	junction_4	59149.77586966918	NA	4	NA	TRUE	NA	NA	NA	C	coding	387	1164	69	1232	80.0	-42	True	NA	NA
PB.8829.8	chr4	-	3129	22	novel_in_catalog	SDAD1	novel	650	4	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	14828	junction_21	61576.98841056037	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	527	2299	30.0	-7	True	AATAAA	-15
PB.420.1	chr1	+	3361	3	full-splice_match	LINC01771	ENST00000445039.2	567	3	-13	-2781	-13	2781	multi-exon	FALSE	canonical	1	4047	junction_1	1346.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	105	318	281	598	45.0	-3	True	NA	NA
PB.4462.1	chr16	-	1279	6	full-splice_match	CFAP20	ENST00000262498.7	1354	6	69	6	-10	-6	multi-exon	FALSE	canonical	1	533385	junction_5	99207.86883791024	NA	0	NA	TRUE	NA	NA	NA	A	coding	193	582	267	848	15.0	-1	True	AATAAA	-22
PB.8628.8	chr3	+	6258	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	47	3	-42	-3	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	4	NA	TRUE	NA	NA	NA	C	coding	755	2268	203	2470	15.0	-17	True	AATAAA	-15
PB.8628.3	chr3	+	3889	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	26	2393	26	-7	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	224	2491	15.0	-38	True	AGTAAA	-22
PB.8829.1	chr4	-	4882	22	full-splice_match	SDAD1	ENST00000356260.9	3017	22	15	-1880	0	1870	multi-exon	TRUE	canonical	1	96282	junction_6	58771.294227223356	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	105	2168	35.0	-7	True	NA	NA
PB.8829.2	chr4	-	4730	22	full-splice_match	SDAD1	ENST00000356260.9	3017	22	15	-1728	0	1718	multi-exon	FALSE	canonical	1	96282	junction_6	58771.294227223356	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	105	2168	25.0	-7	True	AATAAA	-14
PB.8829.3	chr4	-	4611	22	full-splice_match	SDAD1	ENST00000356260.9	3017	22	23	-1617	0	1607	multi-exon	FALSE	canonical	1	96282	junction_6	58771.294227223356	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	97	2160	15.0	1	True	AATAAA	-15
PB.8829.4	chr4	-	3073	22	full-splice_match	SDAD1	ENST00000395710.5	3080	22	1	6	0	4	multi-exon	FALSE	canonical	1	26455	junction_20	56021.28878181499	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	463	2235	15.0	1	True	AATAAA	-23
PB.8829.5	chr4	-	3006	22	full-splice_match	SDAD1	ENST00000356260.9	3017	22	15	-4	0	4	multi-exon	FALSE	canonical	1	96282	junction_6	58771.294227223356	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	105	2168	15.0	-7	True	AATAAA	-23
PB.8829.6	chr4	-	3062	22	novel_in_catalog	SDAD1	novel	650	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	14828	junction_21	66024.65782183045	NA	1	NA	TRUE	NA	NA	NA	C	coding	662	1989	236	2224	15.0	-7	True	AATAAA	-23
PB.8628.4	chr3	+	2383	7	novel_in_catalog	SENP5	novel	2491	9	NA	NA	31	1	combination_of_known_junctions	FALSE	canonical	1	2403	junction_6	94338.81020629258	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	219	2375	40.0	-33	True	NA	NA
PB.11284.41	chr8	-	2679	12	full-splice_match	AZIN1	ENST00000337198.9	4721	12	574	1468	30	-2	multi-exon	FALSE	canonical	1	686724	junction_10	254522.01808630873	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	591	1937	30.0	-1	True	AGTAAA	-15
PB.11284.40	chr8	-	2956	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	27	-126	27	126	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	1	1	TRUE	NA	NA	NA	C	coding	448	1347	740	2086	35.0	-4	True	AATAAA	-21
PB.90.6	chr1	-	3263	21	novel_not_in_catalog	MTOR	novel	4017	20	NA	NA	-31	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	98415.87658395113	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	56	2320	40.0	12	True	AATAAA	-16
PB.11284.42	chr8	-	2445	12	full-splice_match	AZIN1	ENST00000337198.9	4721	12	572	1704	28	-238	multi-exon	FALSE	canonical	1	686724	junction_10	254522.01808630873	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	593	1939	30.0	-3	True	AATAAA	-19
PB.11284.45	chr8	-	2483	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-181	any annotated donor/acceptor	FALSE	canonical	1	13952	junction_10	416094.7835683715	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	574	1920	30.0	-2	True	AATAAA	-17
PB.11284.44	chr8	-	2550	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-181	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	577837.2620786243	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	1390	1980	30.0	-2	True	AATAAA	-17
PB.355.1	chr1	-	3522	4	novel_in_catalog	KDM4A-AS1	novel	592	5	NA	NA	-27	59	intron_retention	FALSE	canonical	1	20704	junction_3	2696.887135610651	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-4	True	NA	NA
PB.11841.6	chr9	+	1751	3	full-splice_match	PTPA	ENST00000432651.5	857	3	47	-941	7	1	multi-exon	FALSE	canonical	1	49960	junction_1	646302.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	ATTAAA	-23
PB.11284.49	chr8	-	2798	13	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	28	-182	combination_of_known_junctions	FALSE	canonical	1	43126	junction_7	515919.2289143557	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	1391	2236	25.0	-3	True	AATAAA	-16
PB.6318.9	chr2	+	4721	21	novel_not_in_catalog	LPIN1	novel	3077	22	NA	NA	35	0	any annotated donor/acceptor	FALSE	canonical	1	834	junction_1	81945.70587558266	NA	34	3	TRUE	NA	NA	NA	C	coding	890	2673	327	2999	100.0	-1	True	NA	NA
PB.4850.4	chr17	-	5323	3	full-splice_match	UNC119	ENST00000470125.5	2050	3	-3269	-4	0	0	multi-exon	FALSE	canonical	1	494030	junction_2	62464.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	125	378	4029	4406	5.0	5895	False	AATAAA	-19
PB.4850.5	chr17	-	1653	4	full-splice_match	UNC119	ENST00000301032.8	1653	4	0	0	0	0	multi-exon	FALSE	canonical	1	333820	junction_3	116704.1599096717	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	75	737	5.0	-20	True	AATAAA	-18
PB.4850.6	chr17	-	5020	4	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	61569	33303	intron_retention	FALSE	canonical	1	4234	junction_3	265286.88921032054	NA	0	NA	TRUE	NA	NA	NA	B	coding	125	378	3728	4105	5.0	-1	True	AATAAA	-17
PB.4850.2	chr17	-	1376	5	full-splice_match	UNC119	ENST00000335765.8	1424	5	48	0	5	0	multi-exon	FALSE	canonical	1	333820	junction_4	101902.90065302361	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	64	786	5.0	-9	True	AATAAA	-19
PB.7365.3	chr20	-	2476	9	novel_not_in_catalog	BCAS1	novel	6112	9	NA	NA	11523	-437	any annotated donor/acceptor	FALSE	canonical	1	7758	junction_8	133142.52882813214	NA	1	NA	TRUE	NA	NA	NA	B	coding	488	1467	66	1532	90.0	-3	False	AAAACA	-43
PB.3605.9	chr14	+	4091	17	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	0	529	combination_of_known_junctions	FALSE	canonical	1	281539	junction_10	123440.16240065468	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	127	2334	20.0	-2	True	AATAAA	-14
PB.3605.8	chr14	+	3542	17	novel_not_in_catalog	ZC3H14	novel	18281	17	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	3535	junction_10	155820.40317410248	NA	1	NA	TRUE	NA	NA	NA	C	coding	725	2178	137	2314	80.0	-12	True	AATAAA	-35
PB.5697.4	chr19	+	3053	6	incomplete-splice_match	ICAM1	ENST00000264832.7	3252	7	287	-2	2	2	intron_retention	FALSE	canonical	1	308728	junction_1	85699.76643142033	NA	29	NA	TRUE	NA	NA	NA	C	coding	477	1434	39	1472	15.0	2	True	AATAAA	-18
PB.5697.5	chr19	+	2357	7	full-splice_match	ICAM1	ENST00000264832.7	3252	7	277	618	-8	414	multi-exon	FALSE	canonical	1	308728	junction_1	80521.66720085691	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	49	1647	25.0	-8	True	NA	NA
PB.5697.2	chr19	+	2216	7	full-splice_match	ICAM1	ENST00000264832.7	3252	7	285	751	0	281	multi-exon	FALSE	canonical	1	308728	junction_1	80521.66720085691	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	41	1639	25.0	0	True	NA	NA
PB.5697.3	chr19	+	2424	6	novel_in_catalog	ICAM1	novel	3252	7	NA	NA	-12	231	intron_retention	FALSE	canonical	1	308728	junction_1	83401.08382413264	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	872	1897	20.0	-12	True	NA	NA
PB.5697.1	chr19	+	3716	7	full-splice_match	ICAM1	ENST00000264832.7	3252	7	-465	1	-465	-1	multi-exon	FALSE	canonical	1	308728	junction_1	80521.66720085691	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	791	2389	15.0	-8212	False	AATAAA	-15
PB.3605.1	chr14	+	3585	17	full-splice_match	ZC3H14	ENST00000555755.5	2529	17	-68	-988	0	0	multi-exon	FALSE	canonical	1	26564	junction_12	158027.3583204325	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	165	2357	80.0	0	True	AATAAA	-35
PB.10531.4	chr7	-	3215	2	full-splice_match	SNHG15	ENST00000580528.1	1073	2	291	-2433	-1	-3	multi-exon	FALSE	canonical	1	683199	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-18	True	AATAAA	-14
PB.3605.3	chr14	+	3721	15	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	3	529	combination_of_known_junctions	FALSE	canonical	1	125480	junction_10	146098.9189941709	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	150	1964	20.0	3	True	AATAAA	-14
PB.3605.2	chr14	+	3339	16	full-splice_match	ZC3H14	ENST00000393514.9	2195	16	-67	-1077	29	-92	multi-exon	FALSE	canonical	1	38192	junction_9	153165.16172675244	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	68	2203	60.0	4	True	NA	NA
PB.3605.5	chr14	+	2415	16	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	38192	junction_9	158745.8491958346	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	146	2278	20.0	-578	False	AATATA	-36
PB.3605.4	chr14	+	2102	15	full-splice_match	ZC3H14	ENST00000556945.5	2075	15	-24	-3	4	1	multi-exon	FALSE	canonical	1	125480	junction_10	138689.24437655503	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	149	1966	25.0	-581	False	AATATA	-35
PB.3605.7	chr14	+	3633	14	full-splice_match	ZC3H14	ENST00000302216.12	2560	14	28	-1101	-9	529	multi-exon	FALSE	canonical	1	70326	junction_9	159406.98446062018	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	137	1876	20.0	-12	True	AATAAA	-14
PB.3605.6	chr14	+	2015	14	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	70326	junction_9	151897.91671534386	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	138	1880	25.0	-13	True	AATATA	-34
PB.6853.2	chr2	-	5893	14	novel_in_catalog	LNPK	novel	7610	13	NA	NA	3	-1785	combination_of_known_junctions	FALSE	canonical	1	13964	junction_11	92370.11186122078	NA	4	NA	TRUE	NA	NA	NA	C	coding	353	1062	547	1608	90.0	-5	True	NA	NA
PB.1066.1	chr1	-	4921	3	novel_not_in_catalog	SLC45A3	novel	2448	3	NA	NA	-7102	-2	intron_retention	FALSE	canonical	1	8484	junction_2	370744.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	371	1116	1251	2366	10.0	-6	True	ATTAAA	-17
PB.1066.2	chr1	-	4050	4	novel_not_in_catalog	SLC45A3	novel	2448	3	NA	NA	-7097	-2	intron_retention	FALSE	canonical	1	8484	junction_3	340376.38092362793	NA	4	NA	TRUE	NA	NA	NA	C	coding	397	1194	302	1495	10.0	-1	True	ATTAAA	-17
PB.11663.2	chr9	+	2859	15	full-splice_match	C9orf3	ENST00000297979.9	2820	15	-43	4	-32	-4	multi-exon	FALSE	canonical	1	9858	junction_5	120382.87490127033	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	219	2381	15.0	-49	True	AATAAA	-19
PB.1935.1	chr11	+	2384	4	novel_in_catalog	NDUFS3	novel	1769	7	NA	NA	3	-1	intron_retention	FALSE	canonical	1	811676	junction_2	382681.8336564549	NA	1	NA	TRUE	NA	NA	NA	A	coding	111	336	336	671	10.0	-49	False	AATAAA	-15
PB.1066.3	chr1	-	3396	5	full-splice_match	SLC45A3	ENST00000367145.3	3341	5	-57	2	-57	-2	multi-exon	FALSE	canonical	1	486056	junction_4	117183.72355728419	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	354	2015	10.0	-10	True	ATTAAA	-17
PB.9483.18	chr5	+	3454	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	96	1293	1	64	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	4	NA	TRUE	NA	NA	NA	C	coding	847	2544	240	2783	25.0	1	True	NA	NA
PB.90.5	chr1	-	8741	58	novel_not_in_catalog	MTOR	novel	4017	20	NA	NA	-44	-7	any annotated donor/acceptor	FALSE	canonical	1	9653	junction_57	91593.12657210988	NA	0	NA	TRUE	NA	NA	NA	C	coding	2549	7650	149	7798	40.0	-1	True	AATAAA	-16
PB.9595.1	chr5	-	2904	7	novel_not_in_catalog	EBF1	novel	4695	12	NA	NA	91	15769	intron_retention	FALSE	canonical	1	1634	junction_1	44094.94205184485	NA	2	NA	TRUE	NA	NA	NA	A	coding	211	636	125	760	50.0	745	False	CATAAA	-20
PB.9355.33	chr5	+	2526	29	full-splice_match	CAST	ENST00000309190.9	4282	29	-1	1757	0	34	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	156	2216	75.0	-6	True	GATAAA	-19
PB.9355.32	chr5	+	2421	28	novel_in_catalog	CAST	novel	864	12	NA	NA	-5	-30	combination_of_known_junctions	FALSE	canonical	1	208086	junction_3	407869.2395717053	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	172	2175	40.0	-22	True	GATAAA	-25
PB.9355.31	chr5	+	2691	29	novel_in_catalog	CAST	novel	864	12	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	4896	junction_2	414244.85765198834	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	442	2253	10.0	-23	True	TTTAAA	-5
PB.9355.30	chr5	+	2616	28	novel_in_catalog	CAST	novel	864	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	208086	junction_3	407869.2395717053	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	174	2177	15.0	-24	True	TTTAAA	-6
PB.9355.37	chr5	+	2833	29	full-splice_match	CAST	ENST00000309190.9	4282	29	-1	1450	0	0	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	156	2216	30.0	-6	True	AATAAA	-37
PB.9355.36	chr5	+	2656	29	full-splice_match	CAST	ENST00000309190.9	4282	29	-3	1629	-2	0	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	158	2218	10.0	-8	True	TTTAAA	-5
PB.9355.35	chr5	+	2722	30	full-splice_match	CAST	ENST00000395813.5	4356	30	9	1625	-2	0	multi-exon	FALSE	canonical	1	158615	junction_2	431322.1552424109	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	158	2284	10.0	-8	True	TTTAAA	-5
PB.9355.34	chr5	+	2779	28	novel_in_catalog	CAST	novel	864	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	208086	junction_3	407869.2395717053	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	159	2162	30.0	-9	True	AATAAA	-37
PB.9355.39	chr5	+	2843	30	full-splice_match	CAST	ENST00000395813.5	4356	30	67	1446	-1	0	multi-exon	FALSE	canonical	1	158615	junction_2	431322.1552424109	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	100	2226	30.0	-7	True	AATAAA	-37
PB.9355.38	chr5	+	4189	28	novel_in_catalog	CAST	novel	864	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	17506	junction_13	446273.3131837883	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	154	2127	25.0	-4	True	ATTAAA	-17
PB.1051.15	chr1	+	4948	19	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-22	-1	any annotated donor/acceptor	FALSE	canonical	1	4080	junction_1	199618.67865570597	NA	1	1	TRUE	NA	NA	NA	C	coding	810	2433	792	3224	20.0	9	True	AATAAA	-17
PB.8904.3	chr4	-	3722	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	261	7	0	0	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	254	697	30.0	-1	True	ATTAAA	-11
PB.11646.32	chr9	-	7573	33	novel_in_catalog	IARS	novel	4656	34	NA	NA	-2	2	intron_retention	FALSE	canonical	1	444149	junction_32	314088.64371154614	NA	6	NA	TRUE	NA	NA	NA	C	coding	735	2208	95	2302	40.0	-3	True	AATAAA	-14
PB.9483.13	chr5	+	5177	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	58	-392	-10	74	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	2	NA	TRUE	NA	NA	NA	C	coding	847	2544	278	2821	35.0	-7	True	AGTAAA	-33
PB.1559.1	chr10	-	2232	1	novel_in_catalog	ENTPD1-AS1	novel	4241	6	NA	NA	36276	5816	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6351.26	chr2	-	1671	13	incomplete-splice_match	ITSN2	ENST00000406921.7	4563	30	-16	78423	-15	-5481	3prime_fragment	FALSE	canonical	1	115515	junction_12	66175.5819623489	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1413	258	1670	70.0	-5	True	NA	NA
PB.10330.1	chr6	+	2408	1	antisense	novelGene_AL159163.1_AS_novelGene_RNASET2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	103	312	1054	1365	100.0	-9977	False	NA	NA
PB.6351.24	chr2	-	2020	16	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-27	-463	intron_retention	FALSE	canonical	1	22450	junction_14	96199.25175222979	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1644	376	2019	60.0	-17	True	ATTAAA	-3
PB.6351.23	chr2	-	1998	16	incomplete-splice_match	ITSN2	ENST00000406921.7	4563	30	-14	66010	-13	-6	3prime_fragment	FALSE	canonical	1	115515	junction_15	66064.92960057467	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1743	256	1998	65.0	-3	True	NA	NA
PB.6351.22	chr2	-	2084	17	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-19	7	intron_retention	FALSE	canonical	1	22450	junction_15	93770.17359347267	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1716	368	2083	55.0	-9	True	CATAAA	-11
PB.6351.21	chr2	-	2208	17	incomplete-splice_match	ITSN2	ENST00000361999.7	5814	39	-224	72904	-24	10555	3prime_fragment	FALSE	canonical	1	115515	junction_16	66002.24692008599	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1941	267	2207	60.0	-14	True	NA	NA
PB.6351.20	chr2	-	2326	18	novel_in_catalog	ITSN2	novel	5814	39	NA	NA	-19	10611	intron_retention	FALSE	canonical	1	22450	junction_16	93399.30181492565	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	368	2326	40.0	-9	True	AAAAAG	-25
PB.11049.7	chr8	-	1919	3	full-splice_match	TRIM35	ENST00000519219.1	423	3	-488	-1008	-25	1008	multi-exon	FALSE	canonical	1	111130	junction_2	13863.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	110	937	80.0	-75	False	NA	NA
PB.11049.6	chr8	-	3291	5	novel_in_catalog	TRIM35	novel	4229	6	NA	NA	-32	56	intron_retention	FALSE	canonical	1	14528	junction_2	58006.19656122956	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	36	932	30.0	-1	True	AATAAA	-14
PB.11049.5	chr8	-	3236	5	novel_in_catalog	TRIM35	novel	4229	6	NA	NA	-37	69	intron_retention	FALSE	canonical	1	3447	junction_4	60872.7927012553	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	41	1426	50.0	-6	True	AATAAA	-27
PB.9483.10	chr5	+	4110	12	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-5	2	intron_retention	FALSE	canonical	1	98290	junction_1	1175581.2281219142	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	1552	3066	20.0	-11	True	NA	NA
PB.11049.3	chr8	-	3653	6	full-splice_match	TRIM35	ENST00000305364.8	4229	6	48	528	-33	394	multi-exon	FALSE	canonical	1	106418	junction_3	22607.856310583717	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	37	1518	20.0	-2	True	NA	NA
PB.11049.2	chr8	-	4169	5	novel_in_catalog	TRIM35	novel	4229	6	NA	NA	35	-2	intron_retention	FALSE	canonical	1	14528	junction_2	58006.19656122956	NA	5	1	TRUE	NA	NA	NA	C	coding	298	897	50	946	25.0	-15	True	NA	NA
PB.11049.1	chr8	-	4198	6	full-splice_match	TRIM35	ENST00000305364.8	4229	6	31	0	31	0	multi-exon	TRUE	canonical	1	106418	junction_3	22607.856310583717	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	54	1535	25.0	-19	True	NA	NA
PB.10091.3	chr6	-	3322	26	novel_in_catalog	SNX14	novel	3348	26	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	1	39174	junction_24	161995.56037015826	NA	2	NA	TRUE	NA	NA	NA	C	coding	885	2658	203	2860	50.0	8166	False	AATAAA	-20
PB.10091.2	chr6	-	3478	28	full-splice_match	SNX14	ENST00000369627.6	3111	28	-66	-301	-3	-2	multi-exon	TRUE	canonical	1	232947	junction_26	127603.72431414183	NA	0	NA	TRUE	NA	NA	NA	C	coding	930	2793	220	3012	35.0	8149	False	AATAAA	-24
PB.10091.1	chr6	-	3460	29	full-splice_match	SNX14	ENST00000314673.7	3486	29	20	6	-4	-6	multi-exon	FALSE	canonical	1	232947	junction_27	131472.23424414254	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	179	2998	50.0	-21	True	AATAAA	-20
PB.10091.7	chr6	-	3075	28	full-splice_match	SNX14	ENST00000369627.6	3111	28	39	-3	-6	0	multi-exon	FALSE	canonical	1	232947	junction_26	127603.72431414183	NA	0	NA	TRUE	NA	NA	NA	C	coding	930	2793	115	2907	20.0	8254	False	AATAAA	-30
PB.10091.6	chr6	-	3348	31	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	4	0	any annotated donor/acceptor	TRUE	canonical	1	963	junction_26	200770.6650945606	NA	3	NA	TRUE	NA	NA	NA	C	coding	511	1536	1645	3180	20.0	-37	True	AATAAA	-30
PB.10091.5	chr6	-	3093	29	full-splice_match	SNX14	ENST00000314673.7	3486	29	93	300	3	0	multi-exon	FALSE	canonical	1	232947	junction_27	131472.23424414254	NA	3	NA	TRUE	NA	NA	NA	C	coding	939	2820	106	2925	20.0	8263	False	AATAAA	-30
PB.820.1	chr1	+	1080	5	full-splice_match	PMF1	ENST00000368277.3	1068	5	-14	2	0	0	multi-exon	TRUE	canonical	1	526775	junction_1	149418.90697883585	NA	0	NA	TRUE	NA	NA	NA	A	coding	205	618	24	641	20.0	-14	True	AATAAA	-19
PB.10091.9	chr6	-	2995	27	novel_in_catalog	SNX14	novel	3348	26	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	52538	junction_23	150416.7147675911	NA	2	NA	TRUE	NA	NA	NA	C	coding	895	2688	144	2831	25.0	14	True	AATAAA	-26
PB.10091.8	chr6	-	3174	28	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	153264.83507101133	NA	4	1	TRUE	NA	NA	NA	C	coding	925	2778	229	3006	20.0	8140	False	AATAAA	-30
PB.6489.48	chr2	-	4455	27	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	396	junction_26	473693.9973830071	NA	4	1	TRUE	NA	NA	NA	C	coding	1067	3204	368	3571	15.0	-13	True	AATAAA	-14
PB.8465.4	chr3	-	1709	3	full-splice_match	PFN2	ENST00000468323.5	894	3	-9	-806	-3	-3	multi-exon	FALSE	canonical	1	5815	junction_2	519953.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-13	True	AATAAA	-13
PB.11415.1	chr8	-	3776	7	novel_not_in_catalog	ZNF250	novel	677	6	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	36271.010207495216	NA	3	NA	TRUE	NA	NA	NA	C	coding	555	1668	132	1799	40.0	-23	True	AATAAA	-21
PB.11391.15	chr8	+	2192	11	novel_in_catalog	GPAA1	novel	878	6	NA	NA	19	-1	intron_retention	FALSE	canonical	1	546511	junction_1	229058.06297157495	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	87	1403	10.0	11	True	AATAAA	-22
PB.11391.14	chr8	+	1906	12	full-splice_match	GPAA1	ENST00000355091.8	2078	12	170	2	92	-2	multi-exon	FALSE	canonical	1	546511	junction_1	219153.51487081245	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	99	1817	10.0	-1364	False	AATAAA	-21
PB.11391.13	chr8	+	2295	10	novel_in_catalog	GPAA1	novel	878	6	NA	NA	11	-5	intron_retention	FALSE	canonical	1	546511	junction_1	233627.96126896146	NA	2	NA	TRUE	NA	NA	NA	C	coding	350	1053	95	1147	15.0	3	True	AATAAA	-18
PB.11391.12	chr8	+	2217	11	novel_in_catalog	GPAA1	novel	878	6	NA	NA	10	-2	intron_retention	FALSE	canonical	1	546511	junction_1	221687.39422267562	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	96	1316	10.0	2	True	AATAAA	-21
PB.11391.11	chr8	+	2410	10	novel_in_catalog	GPAA1	novel	878	6	NA	NA	10	-5	intron_retention	FALSE	canonical	1	546511	junction_1	241386.61059571817	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	675	1625	15.0	2	True	AATAAA	-18
PB.11391.10	chr8	+	2036	12	novel_not_in_catalog	GPAA1	novel	878	6	NA	NA	8	-2	any annotated donor/acceptor	FALSE	canonical	1	805	junction_10	334908.05247721745	NA	6	2	TRUE	NA	NA	NA	C	coding	492	1479	98	1576	10.0	0	True	AATAAA	-21
PB.6834.2	chr2	-	5544	18	full-splice_match	SLC25A12	ENST00000422440.6	2979	18	-32	-2533	-32	2533	multi-exon	FALSE	canonical	1	158172	junction_17	57265.316571262585	NA	4	NA	TRUE	NA	NA	NA	C	coding	678	2037	71	2107	90.0	229	False	NA	NA
PB.11128.5	chr8	-	4919	19	incomplete-splice_match	RB1CC1	ENST00000025008.9	6635	24	-3	13559	2	-12301	3prime_fragment	FALSE	canonical	1	145642	junction_18	84221.50190193288	NA	0	NA	TRUE	NA	NA	NA	C	coding	1464	4392	528	4919	30.0	-1	True	AAGAAA	-27
PB.8905.2	chr4	+	1306	3	full-splice_match	CISD2	ENST00000650480.1	1643	3	-18	355	0	-350	multi-exon	FALSE	canonical	1	862008	junction_1	17540.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	112	519	30.0	-18	True	AATAAA	-39
PB.2218.8	chr11	-	6340	10	novel_in_catalog	CHORDC1	novel	2654	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	35501	junction_7	58552.670807288254	NA	5	NA	TRUE	NA	NA	NA	C	coding	178	537	124	660	20.0	-8	True	AATAAA	-15
PB.2305.2	chr11	+	2416	9	full-splice_match	TMEM25	ENST00000313236.9	2409	9	-8	1	-1	0	multi-exon	FALSE	canonical	1	47279	junction_1	62471.987108098096	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	62	1162	15.0	-1	True	AATAAA	-20
PB.2305.1	chr11	+	2285	8	full-splice_match	TMEM25	ENST00000359862.8	2395	8	106	4	2	0	multi-exon	FALSE	canonical	1	47279	junction_1	73161.18370796785	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	69	1037	25.0	-8	True	AATAAA	-14
PB.4868.1	chr17	+	1976	12	incomplete-splice_match	TAOK1	ENST00000536202.1	4068	18	-592	45826	-125	-16483	3prime_fragment	FALSE	canonical	1	103391	junction_1	55658.248390520035	NA	0	NA	TRUE	NA	NA	NA	B	coding	398	1194	781	1974	40.0	-24	True	NA	NA
PB.6456.1	chr2	-	1128	6	full-splice_match	CALM2	ENST00000272298.11	1302	6	90	84	0	-2	multi-exon	FALSE	canonical	1	2473401	junction_3	1650618.0620371995	NA	0	NA	TRUE	NA	NA	NA	A	coding	149	450	69	518	20.0	-1	True	AATAAA	-18
PB.7193.9	chr20	+	2677	19	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	29	-2	no_combination_of_known_junctions	TRUE	canonical	1	5755	junction_12	274037.2617893188	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	101	1552	10.0	26	True	AATACA	-14
PB.4868.2	chr17	+	2470	16	incomplete-splice_match	TAOK1	ENST00000261716.7	12407	20	-220	34425	-84	2482	3prime_fragment	FALSE	canonical	1	103391	junction_1	61821.75391861131	NA	0	NA	TRUE	NA	NA	NA	B	coding	577	1731	740	2470	65.0	17	True	AATGAA	-16
PB.7193.7	chr20	+	3333	21	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	9	-1	no_combination_of_known_junctions	FALSE	canonical	1	640	junction_1	275392.05767927936	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	649	2952	10.0	6	True	AATACA	-15
PB.2218.1	chr11	-	3067	11	full-splice_match	CHORDC1	ENST00000320585.10	2654	11	315	-728	0	728	multi-exon	FALSE	canonical	1	35501	junction_8	59552.03156240768	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	96	1094	15.0	-1	True	AATAAA	-27
PB.2218.2	chr11	-	3144	12	full-splice_match	CHORDC1	ENST00000525317.5	1136	12	-41	-1967	0	720	multi-exon	FALSE	canonical	1	35501	junction_9	58305.91102308071	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	118	672	20.0	-2	True	AATAAA	-19
PB.2218.3	chr11	-	2489	11	full-splice_match	CHORDC1	ENST00000320585.10	2654	11	313	-148	-2	148	multi-exon	FALSE	canonical	1	35501	junction_8	59552.03156240768	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	98	1096	30.0	-3	True	AATAAA	-21
PB.2218.4	chr11	-	2622	12	novel_not_in_catalog	CHORDC1	novel	2654	11	NA	NA	-34	143	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	60666.267861674685	NA	3	1	TRUE	NA	NA	NA	C	coding	189	570	158	727	30.0	187	False	AATAAA	-16
PB.2218.5	chr11	-	5458	10	novel_in_catalog	CHORDC1	novel	2654	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	35501	junction_7	57469.979345312255	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	4064	4498	25.0	-2	True	AATAAA	-20
PB.2218.6	chr11	-	2005	11	full-splice_match	CHORDC1	ENST00000320585.10	2654	11	297	352	4	-63	multi-exon	FALSE	canonical	1	35501	junction_8	59552.03156240768	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	114	1112	50.0	2	True	TATAAA	-44
PB.2218.7	chr11	-	4814	11	novel_in_catalog	CHORDC1	novel	2654	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	35501	junction_8	56966.10657268057	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	3425	3859	20.0	-4	True	AATAAA	-15
PB.7901.29	chr3	+	2284	16	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	-1825	2550	any annotated donor/acceptor	FALSE	canonical	1	2963	junction_1	27165.54851719361	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2142	141	2282	30.0	-92	False	AGTAAA	-25
PB.7901.28	chr3	+	3922	19	incomplete-splice_match	CHL1	ENST00000620033.4	7311	25	24905	2569	-17110	-9	5prime_fragment	FALSE	canonical	1	34170	junction_16	20365.654020106173	NA	3	1	TRUE	NA	NA	NA	C	coding	625	1878	913	2790	40.0	2626	False	AATAAA	-9
PB.2284.1	chr11	+	2693	4	novel_in_catalog	PTS	novel	935	6	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	434162	junction_1	93713.69686799613	NA	0	NA	TRUE	NA	NA	NA	A	coding	123	372	983	1354	25.0	-60	True	ATTAAA	-17
PB.8342.1	chr3	+	3061	5	full-splice_match	FAM162A	ENST00000477892.5	3052	5	-9	0	-3	0	multi-exon	FALSE	canonical	1	1640372	junction_1	262086.79497162768	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	94	558	20.0	-9	True	AATAAA	-18
PB.3135.2	chr13	+	2029	5	novel_not_in_catalog	TNFSF11	novel	1520	7	NA	NA	712	-5	any annotated donor/acceptor	FALSE	canonical	1	1435	junction_1	8878.666904440102	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	182	940	15.0	864	False	AATAAA	-12
PB.3135.1	chr13	+	2061	5	full-splice_match	TNFSF11	ENST00000398795.6	2199	5	138	0	-13	0	multi-exon	FALSE	canonical	1	11613	junction_1	4632.618778833415	NA	4	NA	TRUE	NA	NA	NA	C	coding	317	954	14	967	15.0	139	False	AATAAA	-17
PB.11744.6	chr9	-	5463	23	novel_not_in_catalog	AKNA	novel	7380	22	NA	NA	-3565	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	114308.34086701924	NA	6	2	TRUE	NA	NA	NA	C	coding	1439	4320	255	4574	80.0	0	True	AATGAA	-18
PB.7901.21	chr3	+	4252	27	novel_in_catalog	CHL1	novel	8023	28	NA	NA	12	467	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	24015.569177578884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	242	3757	50.0	-5	True	ATTAAA	-12
PB.7901.20	chr3	+	3999	20	novel_in_catalog	CHL1	novel	8023	28	NA	NA	6	1162	combination_of_known_junctions	FALSE	canonical	1	1163	junction_19	22693.53068223375	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	248	2497	90.0	-11	True	NA	NA
PB.7901.23	chr3	+	4803	26	novel_in_catalog	CHL1	novel	8023	28	NA	NA	26	-1	no_combination_of_known_junctions	FALSE	canonical	1	1045	junction_1	24950.985333457276	NA	4	NA	TRUE	NA	NA	NA	C	coding	1171	3516	148	3663	30.0	9	True	AATAAA	-17
PB.7901.22	chr3	+	3830	20	novel_in_catalog	CHL1	novel	8023	28	NA	NA	12	999	combination_of_known_junctions	FALSE	canonical	1	1163	junction_19	22693.53068223375	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	242	2491	60.0	-5	True	NA	NA
PB.7901.25	chr3	+	3198	3	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	19739	3	any annotated donor/acceptor	FALSE	canonical	1	1609	junction_1	88.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-7335	False	NA	NA
PB.7901.24	chr3	+	2251	3	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	19694	-4	any annotated donor/acceptor	FALSE	canonical	1	1609	junction_1	2503.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-7380	False	NA	NA
PB.7901.27	chr3	+	4884	26	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	-40890	0	any annotated donor/acceptor	FALSE	canonical	1	188	junction_1	25046.240642331933	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	228	3743	30.0	NA	False	AATAAA	-18
PB.7901.26	chr3	+	4403	28	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	19740	467	any annotated donor/acceptor	FALSE	canonical	1	120	junction_1	24022.827675071327	NA	2	1	TRUE	NA	NA	NA	C	coding	1224	3675	234	3908	50.0	-7334	False	ATTAAA	-12
PB.5064.2	chr17	-	2459	1	novel_in_catalog	AC068152.1	novel	685	6	NA	NA	16929	8142	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	AATATA	-7
PB.5064.3	chr17	-	3310	3	incomplete-splice_match	AC068152.1	ENST00000571901.5	808	6	-40	52594	-21	4913	3prime_fragment	FALSE	canonical	1	21179	junction_2	8771.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-11	True	NA	NA
PB.9162.12	chr5	-	4304	35	full-splice_match	DROSHA	ENST00000513349.5	4681	35	7	370	7	47	multi-exon	FALSE	canonical	1	114725	junction_29	94976.13933051233	NA	5	NA	TRUE	NA	NA	NA	C	coding	1305	3915	390	4304	45.0	-29	True	NA	NA
PB.5064.1	chr17	-	2276	4	incomplete-splice_match	AC068152.1	ENST00000571901.5	808	6	-30	32882	-11	-13535	3prime_fragment	FALSE	canonical	1	9409	junction_1	12043.661348056357	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-27
PB.8342.4	chr3	+	2844	6	novel_not_in_catalog	FAM162A	novel	801	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	741	junction_5	830609.768959022	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	69	533	20.0	16	True	AATAAA	-17
PB.5064.4	chr17	-	5578	2	full-splice_match	AC068152.1	ENST00000570379.1	622	2	-44	-4912	5	4912	multi-exon	FALSE	canonical	1	21179	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1	True	NA	NA
PB.11062.1	chr8	-	2498	17	novel_not_in_catalog	INTS9	novel	2578	17	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	598	junction_1	46389.36293736286	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	98	2014	20.0	-44	True	AATAAA	-17
PB.11701.10	chr9	+	5404	8	full-splice_match	FSD1L	ENST00000374707.1	7062	8	-11	1669	-11	-1669	multi-exon	FALSE	canonical	1	21117	junction_1	18017.593202654083	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	188	1123	20.0	0	True	AATAAA	-22
PB.1011.8	chr1	-	3328	12	full-splice_match	UCHL5	ENST00000367450.7	1355	12	-83	-1890	-18	1546	multi-exon	FALSE	canonical	1	82301	junction_4	218634.89181814183	NA	2	2	TRUE	NA	NA	NA	C	coding	356	1071	120	1190	25.0	-41	True	AATAAA	-24
PB.1011.9	chr1	-	3227	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	133	-1545	-2	1545	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	104	1090	25.0	-25	True	AATAAA	-23
PB.1011.6	chr1	-	3379	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	2	1626	combination_of_known_junctions	FALSE	canonical	1	84596	junction_1	208144.3318388183	NA	9	3	TRUE	NA	NA	NA	C	coding	326	981	100	1080	35.0	-21	True	AATAAA	-20
PB.1011.4	chr1	-	5107	11	full-splice_match	UCHL5	ENST00000367455.8	5327	11	103	117	16	-117	multi-exon	FALSE	canonical	1	312591	junction_3	135775.0796245025	NA	1	1	TRUE	NA	NA	NA	C	coding	329	990	134	1123	20.0	-55	True	AATAAA	-22
PB.1011.5	chr1	-	5151	12	full-splice_match	UCHL5	ENST00000367450.7	1355	12	-64	-3732	1	-121	multi-exon	FALSE	canonical	1	82301	junction_4	218634.89181814183	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	101	1171	25.0	-22	True	AATAAA	-18
PB.8848.18	chr4	-	2319	7	full-splice_match	HNRNPDL	ENST00000507721.5	2404	7	80	5	80	0	multi-exon	FALSE	canonical	1	2760139	junction_1	603702.1009661048	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	75	890	10.0	1402	False	AATAAA	-14
PB.10315.2	chr6	-	3083	11	incomplete-splice_match	TCP1	ENST00000321394.11	2499	12	220	457	43	9	intron_retention	FALSE	canonical	1	544225	junction_7	808325.5255451791	NA	1	NA	TRUE	NA	NA	NA	B	coding	534	1605	1389	2993	20.0	158	False	ATTAAA	-17
PB.1011.1	chr1	-	5220	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	109	-3514	22	5	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	128	1114	35.0	-49	True	AATAAA	-26
PB.10588.4	chr7	-	4538	8	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-23	2	intron_retention	FALSE	canonical	1	1367	junction_6	103589.96218115864	NA	0	NA	TRUE	NA	NA	NA	B	coding	161	486	3267	3752	30.0	NA	False	AATAAA	-20
PB.11333.2	chr8	-	4770	13	novel_in_catalog	MTSS1	novel	4458	14	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	1	25218	junction_3	52324.34690805196	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	497	2569	40.0	496	False	AATAAA	-13
PB.11130.3	chr8	+	1563	4	full-splice_match	RGS20	ENST00000522225.5	1559	4	2	-6	2	-1	multi-exon	FALSE	canonical	1	3197	junction_1	31786.53253607047	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	351	719	20.0	2	True	AATAAA	-20
PB.11888.4	chr9	+	2179	3	full-splice_match	BRD3OS	ENST00000603928.2	5722	3	55	3488	-1	-5	multi-exon	FALSE	canonical	1	93761	junction_1	31868.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	4	True	AATAAA	-14
PB.981.3	chr1	+	2658	18	incomplete-splice_match	SMG7	ENST00000367537.7	5970	24	22	8062	0	2	3prime_fragment	FALSE	canonical	1	6339	junction_1	123733.7735431674	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2421	237	2657	55.0	-7	True	NA	NA
PB.7927.2	chr3	+	2443	1	full-splice_match	AC018809.1	ENST00000602411.1	553	1	-1892	2	-1892	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-41	True	AATAAA	-17
PB.11130.1	chr8	+	1705	5	novel_in_catalog	RGS20	novel	2104	6	NA	NA	77	0	combination_of_known_junctions	FALSE	canonical	1	3528	junction_1	27409.272272353384	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	214	867	20.0	-5737	False	AATAAA	-14
PB.11345.10	chr8	+	4682	23	full-splice_match	EFR3A	ENST00000254624.9	5438	23	18	738	-3	-738	multi-exon	FALSE	canonical	1	195311	junction_1	114238.26304478578	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	208	2673	10.0	13	True	NA	NA
PB.12031.11	chrX	-	4735	30	novel_in_catalog	MED14	novel	7984	31	NA	NA	-59	-1742	no_combination_of_known_junctions	FALSE	canonical	1	26755	junction_29	98637.10659300201	NA	0	NA	TRUE	NA	NA	NA	C	coding	1294	3885	330	4214	70.0	-34	True	AATAAA	-9
PB.12031.10	chrX	-	4726	31	novel_not_in_catalog	MED14	novel	7984	31	NA	NA	-54	-1742	any annotated donor/acceptor	FALSE	canonical	1	9675	junction_30	88631.17795454373	NA	2	1	TRUE	NA	NA	NA	C	coding	1338	4017	189	4205	70.0	-29	True	AATAAA	-9
PB.12031.17	chrX	-	4919	30	incomplete-splice_match	MED14	ENST00000324817.5	7984	31	-17	5566	-17	0	3prime_fragment	FALSE	canonical	1	94460	junction_29	81874.49517853283	NA	0	NA	TRUE	NA	NA	NA	C	coding	1432	4299	137	4435	10.0	-7	True	AATAAA	-16
PB.12031.16	chrX	-	4596	31	novel_in_catalog	MED14	novel	7984	31	NA	NA	-33	-1987	combination_of_known_junctions	FALSE	canonical	1	26755	junction_30	86840.01780802954	NA	3	NA	TRUE	NA	NA	NA	C	coding	1338	4017	304	4320	45.0	-8	True	AATAAA	-21
PB.12031.15	chrX	-	5085	31	full-splice_match	MED14	ENST00000324817.5	7984	31	-324	3223	3	-1986	multi-exon	FALSE	canonical	1	94460	junction_30	80500.21720290917	NA	1	NA	TRUE	NA	NA	NA	C	coding	1454	4365	444	4808	50.0	28	True	AATAAA	-22
PB.12031.14	chrX	-	4919	31	full-splice_match	MED14	ENST00000324817.5	7984	31	-8	3073	-8	-1836	multi-exon	FALSE	canonical	1	94460	junction_30	80500.21720290917	NA	0	NA	TRUE	NA	NA	NA	C	coding	1454	4365	128	4492	25.0	2	True	GATAAA	-17
PB.3129.1	chr13	-	2059	10	full-splice_match	MTRF1	ENST00000379480.8	2185	10	15	111	7	-111	multi-exon	FALSE	canonical	1	23426	junction_9	44995.42393385859	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	87	1424	45.0	13	True	AATAAA	-8
PB.3129.2	chr13	-	4149	9	incomplete-splice_match	MTRF1	ENST00000379477.5	1948	12	-89	-5	-4	5	intron_retention	FALSE	canonical	1	93412	junction_5	32263.978704731613	NA	40	NA	TRUE	NA	NA	NA	C	coding	445	1338	2667	4004	30.0	2	True	CATAAA	-22
PB.3129.3	chr13	-	3675	7	incomplete-splice_match	MTRF1	ENST00000379477.5	1948	12	-91	9575	2	-9575	intron_retention	FALSE	canonical	1	93412	junction_3	34608.303685676365	NA	5	NA	TRUE	NA	NA	NA	C	coding	335	1005	2669	3673	60.0	0	True	NA	NA
PB.3129.4	chr13	-	2517	2	novel_not_in_catalog	MTRF1	novel	2185	10	NA	NA	-8	474	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-10	True	TTTAAA	-40
PB.6598.4	chr2	+	2051	14	full-splice_match	USP39	ENST00000409470.5	2034	14	-12	-5	5	3	multi-exon	FALSE	canonical	1	117070	junction_13	209076.33841719353	NA	2	NA	TRUE	NA	NA	NA	C	coding	565	1698	40	1737	10.0	-29	True	ATTAAA	-24
PB.10315.9	chr6	-	1834	13	novel_not_in_catalog	TCP1	novel	2499	12	NA	NA	6	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	840289.6481981508	NA	1	NA	TRUE	NA	NA	NA	B	coding	534	1605	141	1745	20.0	-1	True	ATTAAA	-16
PB.11888.1	chr9	+	2331	2	full-splice_match	BRD3OS	ENST00000432807.1	2300	2	-35	4	21	-4	multi-exon	FALSE	canonical	1	93761	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	364	738	10.0	-30	True	AATAAA	-15
PB.6827.1	chr2	+	4937	18	incomplete-splice_match	UBR3	ENST00000418381.5	7951	39	120128	10	227	-3	5prime_fragment	FALSE	canonical	1	116992	junction_7	46116.012273470915	NA	2	NA	TRUE	NA	NA	NA	A	coding	741	2226	438	2663	40.0	NA	False	AATAAA	-24
PB.6591.2	chr2	+	2480	14	novel_in_catalog	ELMOD3	novel	590	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	7816	junction_3	44543.987749097134	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	551	1696	25.0	0	True	AATAAA	-12
PB.10068.7	chr6	+	2950	26	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-23	26426	-23	8368	3prime_fragment	FALSE	canonical	1	148676	junction_1	65448.61780766955	NA	4	NA	TRUE	NA	NA	NA	B	coding	929	2787	163	2949	65.0	29	False	AAAACA	-36
PB.11297.5	chr8	-	3460	6	full-splice_match	EIF3E	ENST00000521440.5	746	6	-29	-2685	-8	-2532	multi-exon	FALSE	canonical	1	85153	junction_1	599694.913033419	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	26	544	30.0	-11	True	NA	NA
PB.1684.6	chr10	+	3927	20	novel_not_in_catalog	SEC23IP	novel	7168	19	NA	NA	3	-763	intron_retention	FALSE	canonical	1	21233	junction_19	91260.02893643649	NA	0	NA	TRUE	NA	NA	NA	C	coding	1000	3003	70	3072	10.0	-16	True	AATAAA	-37
PB.1684.7	chr10	+	2783	16	incomplete-splice_match	SEC23IP	ENST00000369075.7	7168	19	16	12371	16	-1483	3prime_fragment	FALSE	canonical	1	223811	junction_2	54134.87527089681	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2727	57	2783	70.0	-3	True	NA	NA
PB.1684.4	chr10	+	4439	19	novel_in_catalog	SEC23IP	novel	7168	19	NA	NA	-7	-763	intron_retention	FALSE	canonical	1	22011	junction_1	92933.60669391288	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	404	3265	10.0	-26	True	AATAAA	-37
PB.12147.6	chrX	-	8052	4	full-splice_match	RLIM	ENST00000332687.10	8317	4	3	262	3	-262	multi-exon	FALSE	canonical	1	67475	junction_1	26827.238102760824	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	217	2091	10.0	7	True	AATAAA	-27
PB.1684.2	chr10	+	4846	19	novel_in_catalog	SEC23IP	novel	7168	19	NA	NA	-8	-357	intron_retention	FALSE	canonical	1	22011	junction_1	92933.60669391288	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	405	3266	15.0	-27	True	AATAAA	-23
PB.1684.3	chr10	+	3484	19	full-splice_match	SEC23IP	ENST00000369075.7	7168	19	-6	3690	-6	-1534	multi-exon	FALSE	canonical	1	223811	junction_2	61365.87819360383	NA	0	NA	TRUE	NA	NA	NA	C	coding	1000	3003	79	3081	25.0	-25	True	ATTAAA	-18
PB.1684.1	chr10	+	4649	19	full-splice_match	SEC23IP	ENST00000369075.7	7168	19	5	2514	5	-358	multi-exon	FALSE	canonical	1	223811	junction_2	61365.87819360383	NA	0	NA	TRUE	NA	NA	NA	C	coding	1000	3003	68	3070	15.0	-14	True	AATAAA	-22
PB.8698.14	chr4	-	2499	15	novel_in_catalog	WDR1	novel	3054	15	NA	NA	-21	312	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_6	1063146.4558068365	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	957	1958	25.0	488	False	NA	NA
PB.10068.4	chr6	+	2926	26	novel_not_in_catalog	MYO6	novel	8692	36	NA	NA	38	8322	any annotated donor/acceptor	FALSE	canonical	1	1952	junction_1	79667.67544945692	NA	0	NA	TRUE	NA	NA	NA	B	coding	914	2742	185	2926	70.0	8	True	NA	NA
PB.12147.9	chrX	-	1749	1	incomplete-splice_match	RLIM	ENST00000332687.10	8317	4	27377	275	27377	-275	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-14
PB.12147.8	chrX	-	8125	5	full-splice_match	RLIM	ENST00000349225.2	3478	5	-21	-4626	-21	-275	multi-exon	FALSE	canonical	1	32435	junction_4	37999.33350731299	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	303	2177	15.0	-17	True	AATAAA	-14
PB.1684.8	chr10	+	2121	4	incomplete-splice_match	SEC23IP	ENST00000543134.5	1461	9	-55	10565	17	580	3prime_fragment	FALSE	canonical	1	223811	junction_2	19827.624270754735	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	56	1219	70.0	-2	True	AAAAAG	-41
PB.1684.9	chr10	+	3645	19	novel_in_catalog	SEC23IP	novel	7168	19	NA	NA	-15	-1531	intron_retention	FALSE	canonical	1	22011	junction_1	92933.60669391288	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	378	3239	25.0	0	True	ATTAAA	-21
PB.3944.3	chr15	-	2271	10	full-splice_match	AAGAB	ENST00000561452.5	2251	10	14	-34	-7	0	multi-exon	FALSE	canonical	1	23138	junction_9	188958.25276499568	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	503	1123	35.0	-5	True	AATAAA	-20
PB.3944.2	chr15	-	2369	11	novel_not_in_catalog	AAGAB	novel	2841	10	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	4095	junction_5	268269.6481800541	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-20
PB.3944.1	chr15	-	2780	10	full-splice_match	AAGAB	ENST00000261880.9	2841	10	70	-9	9	9	multi-exon	FALSE	canonical	1	232456	junction_9	131794.4653110186	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	36	983	30.0	-10	True	ATTAAA	-41
PB.12244.1	chrX	-	2488	2	incomplete-splice_match	NKAPP1	ENST00000452254.2	2384	3	-4	1884	-4	-1884	3prime_fragment	FALSE	canonical	1	26776	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	125	378	113	490	60.0	-27	True	NA	NA
PB.8698.16	chr4	-	2331	15	novel_not_in_catalog	WDR1	novel	3054	15	NA	NA	66	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	1075347.9158613868	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	129	2108	45.0	4	True	AATAAA	-11
PB.3944.5	chr15	-	2098	9	novel_in_catalog	AAGAB	novel	2841	10	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	3356	junction_1	218156.53868667333	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	53	916	35.0	-27	True	AATAAA	-20
PB.3944.4	chr15	-	2122	10	full-splice_match	AAGAB	ENST00000261880.9	2841	10	79	640	-3	0	multi-exon	FALSE	canonical	1	232456	junction_9	131794.4653110186	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	27	974	35.0	-1	True	AATAAA	-20
PB.10598.2	chr7	+	983	12	full-splice_match	BUD23	ENST00000265758.6	1230	12	29	218	0	-110	multi-exon	FALSE	canonical	1	1058257	junction_6	232599.95927047817	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	30	875	45.0	0	True	TATAAA	-14
PB.10598.1	chr7	+	1203	12	full-splice_match	BUD23	ENST00000265758.6	1230	12	26	1	-3	-1	multi-exon	FALSE	canonical	1	1058257	junction_6	232599.95927047817	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	33	878	15.0	-3	True	AATAAA	-15
PB.5928.36	chr19	+	3489	13	incomplete-splice_match	CD22	ENST00000085219.9	3268	14	2567	0	-262	0	5prime_fragment	FALSE	canonical	1	89447	junction_1	159817.9676001862	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	288	2831	40.0	-3382	False	AATAAA	-21
PB.6549.1	chr2	-	4270	5	full-splice_match	RAB11FIP5	ENST00000258098.6	4342	5	71	1	71	-1	multi-exon	FALSE	canonical	1	100701	junction_2	44055.6602797813	NA	0	NA	TRUE	NA	NA	NA	A	coding	653	1962	171	2132	5.0	-45	True	AATAAA	-16
PB.6971.4	chr2	+	3762	12	full-splice_match	FASTKD2	ENST00000402774.7	2586	12	155	-1331	-19	711	multi-exon	FALSE	canonical	1	119828	junction_1	88115.38095067538	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	212	2344	100.0	-19	True	NA	NA
PB.6971.5	chr2	+	4167	13	novel_not_in_catalog	FASTKD2	novel	3188	12	NA	NA	-15	3675	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	123495.27707599344	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	115	2247	30.0	-15	True	AATAAA	-18
PB.6439.2	chr2	-	3362	3	novel_not_in_catalog	ZFP36L2	novel	3696	2	NA	NA	6	-11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	695568.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	488	1467	289	1755	55.0	0	True	AATAAA	-10
PB.6971.1	chr2	+	2960	12	full-splice_match	FASTKD2	ENST00000236980.10	3188	12	227	1	-22	-1	multi-exon	FALSE	canonical	1	150003	junction_1	81294.3845823812	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	122	2254	25.0	-22	True	ATTAAA	-27
PB.6971.2	chr2	+	4059	12	full-splice_match	FASTKD2	ENST00000236980.10	3188	12	228	-1099	-21	1099	multi-exon	FALSE	canonical	1	150003	junction_1	81294.3845823812	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	121	2253	30.0	-21	True	ATTAAA	-20
PB.6971.3	chr2	+	5017	11	novel_in_catalog	FASTKD2	novel	3188	12	NA	NA	-21	0	intron_retention	FALSE	canonical	1	150003	junction_1	85158.34209283316	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	3578	4873	35.0	-21	True	ATTAAA	-18
PB.10038.1	chr6	-	3429	16	full-splice_match	GCLC	ENST00000650454.1	3785	16	347	9	-109	-9	multi-exon	TRUE	canonical	1	246723	junction_15	83610.50564755604	NA	4	NA	TRUE	NA	NA	NA	A	coding	637	1914	110	2023	30.0	346	False	AATAAA	-19
PB.6971.8	chr2	+	2388	12	full-splice_match	FASTKD2	ENST00000236980.10	3188	12	237	563	-12	0	multi-exon	FALSE	canonical	1	150003	junction_1	81294.3845823812	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	112	2244	35.0	-12	True	ATTAAA	-18
PB.6971.9	chr2	+	3500	12	full-splice_match	FASTKD2	ENST00000236980.10	3188	12	238	-550	-11	550	multi-exon	FALSE	canonical	1	150003	junction_1	81294.3845823812	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	111	2243	60.0	-11	True	NA	NA
PB.1093.1	chr1	-	6921	32	full-splice_match	PLXNA2	ENST00000367033.3	11444	32	-63	4586	-63	-724	multi-exon	TRUE	canonical	1	62039	junction_30	26765.795781225883	NA	4	1	TRUE	NA	NA	NA	A	coding	1894	5685	822	6506	20.0	0	True	AATAAA	-19
PB.5431.1	chr18	-	3370	5	full-splice_match	KCTD1	ENST00000580059.6	2897	5	42	-515	42	-9	multi-exon	TRUE	canonical	1	15492	junction_2	42145.7095466134	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	22	2610	45.0	1	True	AATAAA	-9
PB.5431.2	chr18	-	2854	5	full-splice_match	KCTD1	ENST00000580059.6	2897	5	37	6	37	-6	multi-exon	FALSE	canonical	1	15492	junction_2	42145.7095466134	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	27	2615	90.0	-4	True	NA	NA
PB.5431.3	chr18	-	3645	1	full-splice_match	AC007996.1	ENST00000620414.1	2821	1	-2821	1997	-2821	-1997	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	635	1908	86	1993	25.0	-1	True	AATAAA	-19
PB.7268.5	chr20	-	3110	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	669	1560	669	-1560	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	654	False	NA	NA
PB.6439.6	chr2	-	1993	1	novel_in_catalog	ZFP36L2	novel	3696	2	NA	NA	606	-1609	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	465	1398	288	1685	90.0	1697	False	NA	NA
PB.523.6	chr1	-	1664	9	incomplete-splice_match	GBP1	ENST00000370473.4	3035	11	6	2815	6	435	3prime_fragment	FALSE	canonical	1	217553	junction_1	80405.02856466363	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1449	215	1663	65.0	-4	True	NA	NA
PB.523.7	chr1	-	3861	2	full-splice_match	GBP1	ENST00000469194.1	618	2	-90	-3153	40	-564	multi-exon	FALSE	canonical	1	298093	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.523.4	chr1	-	1897	11	full-splice_match	GBP1	ENST00000370473.4	3035	11	19	1119	19	-1	multi-exon	FALSE	canonical	1	217553	junction_3	115362.9684761969	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1695	202	1896	65.0	21	False	ACTAAA	-12
PB.523.5	chr1	-	1730	10	incomplete-splice_match	GBP1	ENST00000370473.4	3035	11	18	2500	18	750	3prime_fragment	FALSE	canonical	1	217553	junction_2	79066.01087199149	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1527	203	1729	55.0	20	False	NA	NA
PB.523.2	chr1	-	2998	11	full-splice_match	GBP1	ENST00000370473.4	3035	11	31	6	31	-6	multi-exon	FALSE	canonical	1	217553	junction_3	115362.9684761969	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	190	1968	45.0	-10	True	ATTAAA	-15
PB.523.3	chr1	-	2021	11	full-splice_match	GBP1	ENST00000370473.4	3035	11	136	878	6	103	multi-exon	FALSE	canonical	1	217553	junction_3	115362.9684761969	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	85	1863	70.0	138	False	TATAAA	-37
PB.523.1	chr1	-	3868	9	novel_in_catalog	GBP1	novel	3035	11	NA	NA	41	-5	intron_retention	FALSE	canonical	1	217553	junction_3	123469.01204528	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	1992	2837	45.0	0	True	ATTAAA	-16
PB.9755.5	chr6	+	1867	4	novel_in_catalog	CD83	novel	2307	5	NA	NA	131	-244	no_combination_of_known_junctions	FALSE	canonical	1	21956	junction_2	113062.5673313478	NA	0	NA	TRUE	NA	NA	NA	C	coding	26	81	349	429	25.0	0	True	ATTAAA	-13
PB.4293.11	chr16	-	4297	8	novel_in_catalog	ERI2	novel	1479	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	25633	junction_7	40692.96997551999	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	1257	2918	35.0	-1	True	AATAAA	-16
PB.9637.7	chr5	+	3408	4	incomplete-splice_match	TSPAN17	ENST00000514705.5	4445	8	-12	3319	-12	-1222	3prime_fragment	FALSE	canonical	1	240671	junction_1	58651.6110397281	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	132	620	90.0	1	True	NA	NA
PB.9755.1	chr6	+	2275	5	full-splice_match	CD83	ENST00000379153.3	2471	5	131	65	131	-65	multi-exon	FALSE	canonical	1	203368	junction_1	72274.878872261	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	41	658	75.0	0	True	NA	NA
PB.9755.3	chr6	+	1698	5	full-splice_match	CD83	ENST00000379153.3	2471	5	91	682	91	-682	multi-exon	FALSE	canonical	1	203368	junction_1	72274.878872261	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	81	698	20.0	-9218	False	NA	NA
PB.9755.2	chr6	+	2041	5	full-splice_match	CD83	ENST00000379153.3	2471	5	131	299	131	-299	multi-exon	FALSE	canonical	1	203368	junction_1	72274.878872261	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	41	658	15.0	0	True	AGTAAA	-15
PB.4293.13	chr16	-	5235	7	novel_in_catalog	ERI2	novel	1479	11	NA	NA	-6	-3	intron_retention	FALSE	canonical	1	46830	junction_6	35954.1870830861	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	2467	3858	40.0	15	True	AATAAA	-14
PB.12158.11	chrX	+	2466	10	novel_in_catalog	PGK1	novel	2405	11	NA	NA	72	-118	intron_retention	FALSE	canonical	1	1623993	junction_7	2054144.4918615958	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	737	1465	25.0	-2	True	NA	NA
PB.12158.10	chrX	+	2584	10	novel_in_catalog	PGK1	novel	2405	11	NA	NA	72	0	intron_retention	FALSE	canonical	1	1623993	junction_7	2054144.4918615958	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	737	1465	15.0	-2	True	NA	NA
PB.12158.13	chrX	+	2066	10	novel_in_catalog	PGK1	novel	2405	11	NA	NA	72	5	intron_retention	FALSE	canonical	1	1623993	junction_8	1674386.6738171089	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	96	1244	5.0	-2	True	AATAAA	-20
PB.12158.12	chrX	+	2311	9	novel_in_catalog	PGK1	novel	2405	11	NA	NA	72	5	intron_retention	FALSE	canonical	1	1623993	junction_7	1687993.1561141436	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	96	884	5.0	-2	True	AATAAA	-20
PB.12158.15	chrX	+	2033	10	novel_in_catalog	PGK1	novel	2405	11	NA	NA	73	3	intron_retention	FALSE	canonical	1	1623993	junction_7	2025527.5971964612	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	95	883	5.0	-1	True	AATAAA	-18
PB.12158.14	chrX	+	4827	11	full-splice_match	PGK1	ENST00000373316.4	4887	11	73	-13	73	13	multi-exon	FALSE	canonical	1	1623993	junction_8	2022128.1005727109	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	95	1348	15.0	-1	True	ATTAAA	-30
PB.12158.17	chrX	+	2665	8	novel_in_catalog	PGK1	novel	2405	11	NA	NA	74	-3	intron_retention	FALSE	canonical	1	1623993	junction_7	1014390.2307850781	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	94	882	20.0	0	True	AATAAA	-12
PB.12158.16	chrX	+	3935	12	novel_not_in_catalog	PGK1	novel	2405	11	NA	NA	74	3079	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	2186528.3175039366	NA	10	1	TRUE	NA	NA	NA	C	coding	417	1254	94	1347	25.0	0	True	ATTAAA	-19
PB.12158.19	chrX	+	4771	6	incomplete-splice_match	PGK1	ENST00000373316.4	4887	11	75	7088	75	-695	3prime_fragment	FALSE	canonical	1	1967905	junction_3	1048401.6519409724	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	93	764	75.0	1	True	NA	NA
PB.12158.18	chrX	+	1905	10	novel_in_catalog	PGK1	novel	2405	11	NA	NA	74	5	intron_retention	FALSE	canonical	1	1623993	junction_7	2054144.4918615958	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	735	1463	5.0	0	True	AATAAA	-20
PB.3932.6	chr15	-	2646	17	novel_in_catalog	DPP8	novel	8699	20	NA	NA	-5	-1	no_combination_of_known_junctions	FALSE	canonical	1	891	junction_2	56182.86862527441	NA	1	1	TRUE	NA	NA	NA	C	coding	669	2010	195	2204	95.0	20	True	NA	NA
PB.3932.7	chr15	-	2947	19	novel_in_catalog	DPP8	novel	8699	20	NA	NA	-5	-10	combination_of_known_junctions	FALSE	canonical	1	11920	junction_16	57698.781363797316	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	236	2710	75.0	1	True	NA	NA
PB.10491.3	chr7	+	1649	8	full-splice_match	STARD3NL	ENST00000434197.5	1341	8	-18	-290	-18	-1	multi-exon	FALSE	canonical	1	43776	junction_4	230742.97754790605	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	235	885	10.0	0	True	ATTAAA	-14
PB.3932.1	chr15	-	3273	21	novel_in_catalog	DPP8	novel	8699	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	13776	junction_20	62867.578589822435	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	330	3026	100.0	-5	True	NA	NA
PB.3932.2	chr15	-	3235	21	novel_in_catalog	DPP8	novel	8699	20	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	2512	junction_4	64368.99676000863	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	210	2351	100.0	5	True	NA	NA
PB.3932.3	chr15	-	3040	20	full-splice_match	DPP8	ENST00000300141.10	3139	20	-15	114	-10	7	multi-exon	FALSE	canonical	1	108852	junction_19	42326.56397007044	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	241	2889	20.0	-4	True	AATAAA	-21
PB.6993.8	chr2	+	1778	15	incomplete-splice_match	XRCC5	ENST00000392132.6	3428	21	54	46202	0	18770	3prime_fragment	FALSE	canonical	1	2064329	junction_8	540394.8181415934	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1692	87	1778	60.0	0	True	NA	NA
PB.6993.9	chr2	+	2447	21	full-splice_match	XRCC5	ENST00000392132.6	3428	21	118	863	64	5	multi-exon	FALSE	canonical	1	2064329	junction_8	631793.6970150066	NA	5	1	TRUE	NA	NA	NA	C	coding	732	2199	23	2221	10.0	35	True	TATAAA	-17
PB.1091.1	chr1	-	2573	1	antisense	novelGene_CD46_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	133	402	1425	1826	80.0	NA	False	NA	NA
PB.6993.4	chr2	+	3219	21	full-splice_match	XRCC5	ENST00000392132.6	3428	21	51	158	-3	-158	multi-exon	FALSE	canonical	1	2064329	junction_8	631793.6970150066	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	90	2288	5.0	-3	True	ACTAAA	-31
PB.6993.5	chr2	+	2335	20	novel_not_in_catalog	XRCC5	novel	3761	23	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	934960.3791008497	NA	1	1	TRUE	NA	NA	NA	C	coding	272	819	1297	2115	10.0	-3	True	TATAAA	-11
PB.6993.6	chr2	+	2087	18	incomplete-splice_match	XRCC5	ENST00000392132.6	3428	21	51	13599	-3	-12730	3prime_fragment	FALSE	canonical	1	2064329	junction_8	523755.3220926813	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	1998	90	2087	60.0	-3	True	NA	NA
PB.6993.7	chr2	+	3187	20	novel_not_in_catalog	XRCC5	novel	3761	23	NA	NA	0	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	934960.3791008497	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	87	1235	15.0	0	True	ATTAAA	-15
PB.6993.1	chr2	+	3310	21	full-splice_match	XRCC5	ENST00000392132.6	3428	21	108	10	54	-10	multi-exon	FALSE	canonical	1	2064329	junction_8	631793.6970150066	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	33	2231	10.0	25	True	ATTAAA	-16
PB.6993.2	chr2	+	3431	20	novel_in_catalog	XRCC5	novel	3761	23	NA	NA	2	4	intron_retention	FALSE	canonical	1	2064329	junction_7	637101.4196263247	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	1350	3206	10.0	-18	True	TATAAA	-16
PB.6993.3	chr2	+	940	8	incomplete-splice_match	XRCC5	ENST00000392132.6	3428	21	51	78703	-3	-402	3prime_fragment	FALSE	canonical	1	2077556	junction_5	442092.5153393362	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	849	90	938	75.0	-3	True	AAAAAG	-30
PB.10903.3	chr7	-	2246	1	novel_in_catalog	TPK1	novel	2439	9	NA	NA	0	1323	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	ATTAAA	-40
PB.10903.2	chr7	-	2289	8	full-splice_match	TPK1	ENST00000378099.7	2283	8	-6	0	-6	0	multi-exon	FALSE	canonical	1	6797	junction_2	16701.309193458765	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	110	694	50.0	-7	True	AATAAA	-13
PB.10903.1	chr7	-	2430	9	full-splice_match	TPK1	ENST00000360057.7	2439	9	0	9	0	0	multi-exon	FALSE	canonical	1	33115	junction_5	8737.121571740603	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	104	835	50.0	-1	True	AATAAA	-13
PB.8425.19	chr3	+	2602	21	full-splice_match	ARMC8	ENST00000538260.5	4728	21	283	1843	0	0	multi-exon	FALSE	canonical	1	12023	junction_5	108521.21309467562	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	25	1953	90.0	0	True	AATATA	-41
PB.2758.1	chr12	+	1763	16	full-splice_match	CNOT2	ENST00000229195.7	3282	16	441	1078	-1	1	multi-exon	FALSE	canonical	1	359584	junction_1	126009.29042408826	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1620	142	1761	100.0	2	True	NA	NA
PB.2758.3	chr12	+	1994	17	novel_in_catalog	CNOT2	novel	1545	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	7921	junction_2	218175.2164971049	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1593	402	1994	95.0	-7	True	NA	NA
PB.2758.2	chr12	+	2846	16	full-splice_match	CNOT2	ENST00000229195.7	3282	16	438	-2	-1	1	multi-exon	FALSE	canonical	1	359584	junction_1	126009.29042408826	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	145	1767	10.0	-1	True	AATAAA	-20
PB.2758.5	chr12	+	2747	14	incomplete-splice_match	CNOT2	ENST00000418359.7	3152	17	401	9554	-2	-627	internal_fragment	FALSE	canonical	1	359584	junction_1	127462.30516179977	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	146	1573	15.0	-2	True	AATAAA	-23
PB.2758.4	chr12	+	1829	17	novel_in_catalog	CNOT2	novel	1545	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	21339	junction_2	216292.33525564388	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1593	236	1828	100.0	-7	True	NA	NA
PB.2758.7	chr12	+	2092	16	full-splice_match	CNOT2	ENST00000229195.7	3282	16	437	753	-2	301	multi-exon	FALSE	canonical	1	359584	junction_1	126009.29042408826	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	146	1768	70.0	-2	True	AATACA	-26
PB.2758.6	chr12	+	2206	16	full-splice_match	CNOT2	ENST00000229195.7	3282	16	437	639	-2	415	multi-exon	FALSE	canonical	1	359584	junction_1	126009.29042408826	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	146	1768	20.0	-2	True	AATAAA	-28
PB.2758.9	chr12	+	2010	17	novel_not_in_catalog	CNOT2	novel	1545	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	5340	junction_8	221214.29006480344	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	840	1170	2009	100.0	0	True	NA	NA
PB.2758.8	chr12	+	2176	18	novel_in_catalog	CNOT2	novel	1545	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1747	junction_2	242811.84329779868	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1593	582	2174	100.0	0	True	NA	NA
PB.8056.1	chr3	+	3487	6	novel_in_catalog	ZKSCAN7	novel	2791	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	9667	junction_5	5514.54507280519	NA	0	NA	TRUE	NA	NA	NA	B	coding	753	2262	444	2705	30.0	1	True	AATAAA	-17
PB.6983.2	chr2	+	5843	40	novel_in_catalog	CPS1	novel	699	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	10196	junction_2	216633.35949414	NA	1	NA	TRUE	NA	NA	NA	C	coding	1500	4503	221	4723	25.0	-8	True	AATAAA	-16
PB.10127.18	chr6	-	4731	26	novel_not_in_catalog	ASCC3	novel	8146	42	NA	NA	-2	10565	any annotated donor/acceptor	FALSE	canonical	1	3891	junction_1	68275.87073894848	NA	0	NA	TRUE	NA	NA	NA	C	coding	1427	4284	348	4631	30.0	-38	True	NA	NA
PB.8448.18	chr3	+	4274	27	full-splice_match	U2SURP	ENST00000488497.7	3557	27	435	-1152	-7	-1	multi-exon	FALSE	canonical	1	29118	junction_12	214285.11960827804	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	1312	3072	25.0	1	True	AATAAA	-24
PB.11068.7	chr8	-	2313	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-19	436	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	192785.86750200338	NA	1	1	TRUE	NA	NA	NA	C	coding	391	1176	215	1390	90.0	-6	True	AAGAAA	-30
PB.915.1	chr1	+	1908	8	novel_not_in_catalog	TIPRL	novel	3032	7	NA	NA	43	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	333013.1452080337	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	106	921	30.0	14	True	AATAAA	-20
PB.5873.2	chr19	-	5252	4	full-splice_match	ZNF626	ENST00000291750.6	1123	4	7	-4136	4	4136	multi-exon	FALSE	canonical	1	89924	junction_3	9032.143353355037	NA	9	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-19	True	NA	NA
PB.9122.4	chr5	-	5300	24	full-splice_match	SLC12A7	ENST00000264930.9	5280	24	-29	9	-29	-9	multi-exon	FALSE	non_canonical	0	0	junction_14	71622.17981787412	NA	0	NA	TRUE	NA	NA	NA	C	coding	1083	3252	74	3325	30.0	-2	True	AATAAA	-16
PB.4853.10	chr17	-	3456	22	incomplete-splice_match	SPAG5	ENST00000321765.9	4040	24	264	686	-10	117	3prime_fragment	FALSE	canonical	1	279451	junction_18	118869.06075112596	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3387	70	3456	65.0	-1	True	NA	NA
PB.8448.16	chr3	+	5519	22	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-8	735	intron_retention	FALSE	canonical	1	374240	junction_9	157053.7453548655	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	28	1353	70.0	0	True	NA	NA
PB.1770.6	chr11	-	6568	32	novel_in_catalog	NUP98	novel	580	3	NA	NA	-1	-10	no_combination_of_known_junctions	FALSE	canonical	1	14070	junction_2	125795.4701533112	NA	3	NA	TRUE	NA	NA	NA	C	coding	1644	4935	183	5117	10.0	0	True	AATAAA	-15
PB.2762.8	chr12	+	4262	6	full-splice_match	TMEM19	ENST00000266673.9	5656	6	403	991	-6	-1	multi-exon	FALSE	canonical	1	194091	junction_2	36314.05975101104	NA	5	NA	TRUE	NA	NA	NA	C	coding	300	903	300	1202	25.0	5	True	AATAAA	-18
PB.1770.5	chr11	-	6603	32	novel_in_catalog	NUP98	novel	580	3	NA	NA	-13	-10	combination_of_known_junctions	FALSE	canonical	1	30410	junction_21	123618.9529328928	NA	0	NA	TRUE	NA	NA	NA	C	coding	1753	5262	204	5465	10.0	190	False	AATAAA	-15
PB.1770.2	chr11	-	6668	33	full-splice_match	NUP98	ENST00000324932.11	6973	33	238	67	-2	-46	multi-exon	FALSE	canonical	1	154074	junction_32	101951.66901618885	NA	1	NA	TRUE	NA	NA	NA	C	coding	1800	5403	184	5586	15.0	-1	True	ATTAAA	-32
PB.1770.3	chr11	-	6510	32	full-splice_match	NUP98	ENST00000355260.7	5628	32	-96	-786	-2	-2	multi-exon	FALSE	canonical	1	25712	junction_4	124866.87384647486	NA	0	NA	TRUE	NA	NA	NA	C	coding	1726	5181	184	5364	10.0	-1	True	AATAAA	-23
PB.1770.1	chr11	-	6785	33	full-splice_match	NUP98	ENST00000359171.8	7023	33	238	0	-2	0	multi-exon	FALSE	canonical	1	85348	junction_23	115696.25344353677	NA	0	NA	TRUE	NA	NA	NA	C	coding	1817	5454	184	5637	10.0	-1	True	AATAAA	-25
PB.2762.3	chr12	+	2894	7	novel_not_in_catalog	AC073612.1	novel	771	5	NA	NA	12311	4219	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	95629.10146222342	NA	3	1	TRUE	NA	NA	NA	B	coding	300	903	275	1177	100.0	-67	False	NA	NA
PB.819.2	chr1	+	4200	5	novel_not_in_catalog	SLC25A44	novel	3662	4	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	5187	junction_1	106233.58052982824	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	892	1836	10.0	-18	True	ATTAAA	-20
PB.2762.1	chr12	+	1729	7	novel_in_catalog	AC073612.1	novel	771	5	NA	NA	11868	5087	intron_retention	FALSE	canonical	1	10952	junction_6	91811.51796434185	NA	0	NA	TRUE	NA	NA	NA	B	coding	235	708	913	1620	25.0	-21	True	AATAAA	-18
PB.2762.6	chr12	+	2245	6	full-splice_match	TMEM19	ENST00000266673.9	5656	6	410	3001	1	-2011	multi-exon	FALSE	canonical	1	194091	junction_2	36314.05975101104	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	293	1195	15.0	12	True	ACTAAA	-17
PB.2762.7	chr12	+	2511	7	novel_not_in_catalog	AC073612.1	novel	771	5	NA	NA	11889	3076	intron_retention	FALSE	canonical	1	8489	junction_6	92668.09472340881	NA	0	NA	TRUE	NA	NA	NA	B	coding	269	810	697	1506	15.0	0	True	ACTAAA	-16
PB.2762.4	chr12	+	2864	7	novel_not_in_catalog	AC073612.1	novel	771	5	NA	NA	12327	4219	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	95629.10146222342	NA	1	1	TRUE	NA	NA	NA	B	coding	300	903	259	1161	100.0	0	True	NA	NA
PB.2762.5	chr12	+	3377	6	full-splice_match	TMEM19	ENST00000266673.9	5656	6	420	1859	11	-869	multi-exon	FALSE	canonical	1	194091	junction_2	36314.05975101104	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	283	1185	100.0	22	True	NA	NA
PB.5459.1	chr18	+	2908	6	full-splice_match	SIGLEC15	ENST00000389474.7	1573	6	191	-1526	191	2	multi-exon	FALSE	canonical	1	6503	junction_1	2127.2789191829074	NA	16	NA	TRUE	NA	NA	NA	A	coding	328	987	27	1013	75.0	-13	True	NA	NA
PB.7071.9	chr2	+	4978	6	novel_in_catalog	COPS7B	novel	1103	7	NA	NA	0	-4	intron_retention	FALSE	canonical	1	252632	junction_1	91634.67952385712	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	3432	3905	15.0	0	True	AATACA	-15
PB.11769.10	chr9	-	2739	7	novel_not_in_catalog	RBM18	novel	4974	6	NA	NA	-5	1668	any annotated donor/acceptor	FALSE	canonical	1	43	junction_3	154689.51474054946	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	147	575	15.0	-24	True	AATAAA	-21
PB.11769.11	chr9	-	2577	6	novel_not_in_catalog	RBM18	novel	4974	6	NA	NA	0	1659	any annotated donor/acceptor	FALSE	canonical	1	16775	junction_5	124740.22833136067	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	132	704	10.0	-19	True	AATAAA	-12
PB.11769.12	chr9	-	2496	6	novel_not_in_catalog	RBM18	novel	4974	6	NA	NA	1	1659	any annotated donor/acceptor	FALSE	canonical	1	7911	junction_3	123795.88915048836	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	141	623	10.0	-18	True	AATAAA	-12
PB.2245.14	chr11	+	2394	9	novel_not_in_catalog	BIRC3	novel	4342	10	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	11	junction_1	183951.7673894097	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	162	1763	15.0	1	True	AATAAA	-19
PB.414.1	chr1	-	3772	1	novel_in_catalog	ECHDC2	novel	1446	8	NA	NA	4	-4267	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	90	273	86	358	85.0	-30	True	NA	NA
PB.7071.7	chr2	+	1985	7	full-splice_match	COPS7B	ENST00000350033.7	2544	7	30	529	-1	0	multi-exon	FALSE	canonical	1	252632	junction_1	88696.93666528487	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	112	906	15.0	-1	True	AATACA	-21
PB.6990.68	chr2	-	7758	45	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1194474	junction_7	2618216.436210755	NA	1	NA	TRUE	NA	NA	NA	C	coding	2266	6801	267	7067	30.0	-1	True	AATAAA	-16
PB.7071.4	chr2	+	4458	7	novel_in_catalog	COPS7B	novel	1103	7	NA	NA	-3	0	intron_retention	TRUE	canonical	1	14887	junction_2	160590.50936984623	NA	4	NA	TRUE	NA	NA	NA	C	coding	157	474	2907	3380	15.0	-34	False	AATACA	-20
PB.7716.1	chr22	-	2544	5	full-splice_match	PATZ1	ENST00000405309.7	3711	5	1173	-6	717	1	multi-exon	TRUE	canonical	1	59418	junction_2	160120.36839437386	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	22	1071	10.0	1514	False	ATTAAA	-22
PB.1960.3	chr11	-	4176	20	novel_not_in_catalog	PATL1	novel	4072	19	NA	NA	-35	-5	any annotated donor/acceptor	FALSE	canonical	1	32889	junction_15	130570.74936392554	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	852	2507	35.0	0	True	AATAAA	-17
PB.6786.31	chr2	-	3089	11	novel_in_catalog	PRPF40A	novel	8048	26	NA	NA	13	-2	intron_retention	FALSE	canonical	1	63947	junction_6	389602.77111981635	NA	1	NA	TRUE	NA	NA	NA	B	coding	209	627	2461	3087	75.0	-10	True	TATAAA	-9
PB.1960.1	chr11	-	4131	19	full-splice_match	PATL1	ENST00000300146.9	4072	19	-87	28	-87	-28	multi-exon	FALSE	canonical	1	97743	junction_12	118268.75779239491	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	173	2485	65.0	461	False	AATAAA	-34
PB.3418.2	chr14	+	1420	1	incomplete-splice_match	ARF6	ENST00000298316.6	3865	2	254	2289	254	-2289	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	175	528	392	919	25.0	0	True	AGTAAA	-17
PB.3418.5	chr14	+	1585	2	full-splice_match	ARF6	ENST00000298316.6	3865	2	-5	2285	-5	-2285	multi-exon	FALSE	canonical	1	554371	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	553	1080	20.0	-9	True	AGTAAA	-21
PB.3418.4	chr14	+	3873	2	full-splice_match	ARF6	ENST00000298316.6	3865	2	-9	1	-9	-1	multi-exon	FALSE	canonical	1	554371	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	557	1084	20.0	-13	True	AATAAA	-16
PB.1960.5	chr11	-	4167	19	novel_not_in_catalog	PATL1	novel	4072	19	NA	NA	-116	-5	any annotated donor/acceptor	FALSE	canonical	1	32889	junction_14	134654.47353785235	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	933	2498	35.0	432	False	AATAAA	-17
PB.1960.4	chr11	-	3962	18	novel_in_catalog	PATL1	novel	4072	19	NA	NA	-29	-49	no_combination_of_known_junctions	FALSE	canonical	1	87854	junction_12	121946.55975541062	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	115	2337	25.0	6	True	AATAAA	-13
PB.7071.2	chr2	+	2081	7	full-splice_match	COPS7B	ENST00000410024.5	1103	7	21	-999	7	0	multi-exon	FALSE	canonical	1	61468	junction_1	142799.4055396318	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	209	1003	15.0	7	True	AATACA	-20
PB.7071.3	chr2	+	2097	7	novel_not_in_catalog	COPS7B	novel	1103	7	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_3	190749.3606487028	NA	3	1	TRUE	NA	NA	NA	C	coding	157	474	546	1019	15.0	11	True	AATACA	-20
PB.1117.19	chr1	-	2055	9	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-9	-110	combination_of_known_junctions	FALSE	canonical	1	65115	junction_8	54559.420971542575	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	381	1853	25.0	-16	True	AATGAA	-21
PB.1117.18	chr1	-	2306	9	novel_not_in_catalog	ANGEL2	novel	4649	9	NA	NA	19	-32	any annotated donor/acceptor	FALSE	canonical	1	5985	junction_7	95527.11996568042	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	897	1664	35.0	12	True	AGTAAA	-17
PB.5528.1	chr18	+	4069	2	full-splice_match	TSHZ1	ENST00000322038.5	4992	2	44	879	44	-872	multi-exon	FALSE	canonical	1	19502	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	1032	3099	541	3639	90.0	2	True	NA	NA
PB.6990.69	chr2	-	7609	45	full-splice_match	FN1	ENST00000443816.5	7762	45	151	2	145	1	multi-exon	FALSE	canonical	1	3539696	junction_14	2268630.7343462408	NA	2	NA	TRUE	NA	NA	NA	C	coding	2265	6798	121	6918	30.0	507	False	AATAAA	-16
PB.10982.1	chr8	-	4143	3	full-splice_match	FAM167A	ENST00000284486.8	4094	3	-72	23	-72	-23	multi-exon	FALSE	canonical	1	26987	junction_2	7804.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	214	645	612	1256	75.0	9147	False	AATAAA	-27
PB.1117.11	chr1	-	4303	8	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-58	-277	no_combination_of_known_junctions	FALSE	canonical	1	23313	junction_3	75001.43849940208	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	214	1359	30.0	-31	False	ATTAAA	-21
PB.1117.10	chr1	-	4512	9	novel_not_in_catalog	ANGEL2	novel	4649	9	NA	NA	-9	-277	any annotated donor/acceptor	FALSE	canonical	1	9642	junction_8	69364.3699278266	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	362	1930	30.0	-16	True	ATTAAA	-21
PB.1117.13	chr1	-	4250	10	novel_not_in_catalog	ANGEL2	novel	4649	9	NA	NA	82	-277	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	84274.27753999965	NA	5	2	TRUE	NA	NA	NA	C	coding	522	1569	100	1668	30.0	-1	True	ATTAAA	-21
PB.7071.1	chr2	+	2629	7	full-splice_match	COPS7B	ENST00000410024.5	1103	7	4	-1530	-3	0	multi-exon	FALSE	canonical	1	61468	junction_1	142799.4055396318	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	226	1020	30.0	-10	True	AATAAA	-23
PB.1117.14	chr1	-	4003	8	full-splice_match	ANGEL2	ENST00000360506.6	4323	8	43	277	43	-277	multi-exon	FALSE	canonical	1	26801	junction_7	65193.08371041724	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	294	1421	30.0	1	True	ATTAAA	-21
PB.1117.17	chr1	-	1987	8	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	15	-27	no_combination_of_known_junctions	FALSE	canonical	1	23313	junction_3	75794.7723370989	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	357	1340	15.0	8	True	AGTAAA	-22
PB.1117.16	chr1	-	3416	9	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-27	496	combination_of_known_junctions	FALSE	canonical	1	65115	junction_8	54559.420971542575	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	303	1871	50.0	333	False	AATAGA	-20
PB.4705.1	chr17	+	2929	5	full-splice_match	RPAIN	ENST00000573126.1	2728	5	-34	-167	-1	-5	multi-exon	FALSE	canonical	1	368437	junction_4	248466.7640238831	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	46	474	55.0	7	True	AATAAA	-10
PB.4705.2	chr17	+	2166	2	full-splice_match	RPAIN	ENST00000575711.1	732	2	-9	-1425	-5	280	multi-exon	FALSE	canonical	1	662247	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	110	333	32	364	95.0	-5	True	NA	NA
PB.11495.22	chr9	-	2720	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-45	1423	-45	-1141	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2355	364	2718	75.0	-13	True	NA	NA
PB.9734.3	chr6	+	2743	7	novel_not_in_catalog	TMEM14B	novel	888	5	NA	NA	1	19353	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	139917.58655961254	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	115	429	100.0	7	True	NA	NA
PB.7252.3	chr20	-	3015	9	incomplete-splice_match	NCOA6	ENST00000616167.1	3271	11	49	10555	49	-10555	3prime_fragment	FALSE	canonical	1	41526	junction_8	56898.20446076814	NA	1	NA	TRUE	NA	NA	NA	B	coding	914	2742	274	3015	45.0	-3	True	AATAAA	-4
PB.7252.2	chr20	-	6234	11	incomplete-splice_match	NCOA6	ENST00000374796.6	9311	16	53105	63	-18952	-62	5prime_fragment	FALSE	canonical	1	123953	junction_8	82147.77270656826	NA	2	NA	TRUE	NA	NA	NA	B	coding	1911	5736	14	5749	50.0	49	False	AATAAA	-25
PB.7904.3	chr3	+	1325	3	full-splice_match	SETMAR	ENST00000425046.1	1359	3	33	1	-1	-1	multi-exon	FALSE	canonical	1	22168	junction_1	41187.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	219	1307	45.0	1	True	NA	NA
PB.7383.1	chr20	-	5658	1	genic	GNAS-AS1	novel	NA	NA	NA	NA	15626	27	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.135.2	chr1	+	1989	8	full-splice_match	PQLC2	ENST00000375153.7	2153	8	-22	186	-20	107	multi-exon	FALSE	canonical	1	125222	junction_7	26856.428416029303	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	663	1538	65.0	-20	True	NA	NA
PB.135.1	chr1	+	1814	9	full-splice_match	PQLC2	ENST00000375155.7	1805	9	-53	44	-53	-24	multi-exon	FALSE	canonical	1	63640	junction_1	41197.71054906298	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	326	1201	80.0	-77	False	NA	NA
PB.184.2	chr1	+	3990	11	full-splice_match	MACO1	ENST00000374343.4	3917	11	-77	4	-15	0	multi-exon	FALSE	canonical	1	137083	junction_1	105292.84615604233	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	257	2251	25.0	-6480	False	AATAAA	-16
PB.53.1	chr1	-	2087	1	incomplete-splice_match	GPR153	ENST00000377893.2	4082	6	11535	8	11535	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	128	387	1	387	20.0	NA	False	AATAAA	-19
PB.3422.2	chr14	-	5386	24	novel_not_in_catalog	SOS2	novel	5498	23	NA	NA	-40	-14	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_22	66746.47276037026	NA	1	1	TRUE	NA	NA	NA	B	coding	1272	3819	358	4176	50.0	-1	True	AATAAA	-21
PB.3422.3	chr14	-	5313	23	novel_not_in_catalog	SOS2	novel	5498	23	NA	NA	-406	-15	any annotated donor/acceptor	FALSE	canonical	1	608	junction_22	54172.01981705977	NA	3	NA	TRUE	NA	NA	NA	B	coding	1272	3819	286	4104	50.0	-1	True	AATAAA	-20
PB.166.2	chr1	+	1613	10	full-splice_match	LYPLA2	ENST00000374514.7	1810	10	195	2	-22	-2	multi-exon	TRUE	canonical	1	1159	junction_6	79208.31618391693	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	128	808	20.0	20	True	ATTAAA	-15
PB.166.1	chr1	+	1713	9	incomplete-splice_match	LYPLA2	ENST00000374514.7	1810	10	176	2	-41	-2	intron_retention	TRUE	canonical	1	1159	junction_6	81806.73786115894	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	147	848	20.0	1	True	ATTAAA	-15
PB.9660.4	chr5	-	2598	14	novel_in_catalog	CLK4	novel	3722	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	35703	junction_12	96207.05180085823	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	309	1646	5.0	3529	False	CATAAA	-13
PB.9660.5	chr5	-	2545	13	full-splice_match	CLK4	ENST00000316308.8	2568	13	22	1	-4	0	multi-exon	FALSE	canonical	1	132675	junction_11	74609.04969587023	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	148	1593	5.0	3523	False	CATAAA	-13
PB.9660.6	chr5	-	1890	13	novel_in_catalog	CLK4	novel	3722	13	NA	NA	-14	5	combination_of_known_junctions	FALSE	canonical	1	35703	junction_11	104571.30742331866	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	633	1538	40.0	-40	True	AGTAAA	-26
PB.9660.7	chr5	-	1959	13	full-splice_match	CLK4	ENST00000316308.8	2568	13	3	606	1	0	multi-exon	FALSE	canonical	1	132675	junction_11	74609.04969587023	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	167	1612	35.0	0	True	AGTAAA	-21
PB.9660.1	chr5	-	2440	12	novel_in_catalog	CLK4	novel	3722	13	NA	NA	16	5	combination_of_known_junctions	FALSE	canonical	1	79614	junction_9	83606.8767498689	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	577	1482	5.0	3543	False	CATAAA	-19
PB.9660.2	chr5	-	2520	13	novel_in_catalog	CLK4	novel	3722	13	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	1	35703	junction_11	104571.30742331866	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	658	1563	5.0	3521	False	CATAAA	-18
PB.7068.31	chr2	-	2259	13	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	95	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	2273961.703779692	NA	4	1	TRUE	NA	NA	NA	C	coding	609	1830	147	1976	20.0	-16	True	NA	NA
PB.9569.2	chr5	-	3233	7	full-splice_match	ZNF300	ENST00000446148.6	3323	7	80	10	75	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	26937.696720086024	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	349	2211	30.0	10	True	CATAAA	-18
PB.9569.3	chr5	-	3205	6	full-splice_match	ZNF300	ENST00000274599.9	3268	6	53	10	48	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	23712.533364446743	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	369	2183	30.0	47	False	CATAAA	-18
PB.9569.1	chr5	-	4239	5	full-splice_match	ZNF300	ENST00000427179.5	4155	5	-87	3	-87	-3	multi-exon	FALSE	canonical	1	33010	junction_2	12803.143644726479	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	2796	3179	30.0	-10	True	CATAAA	-18
PB.9660.8	chr5	-	1593	2	full-splice_match	CLK4	ENST00000520957.1	1690	2	-19	116	3	-116	multi-exon	FALSE	canonical	1	253213	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	44	135	163	297	70.0	-20	True	NA	NA
PB.9660.9	chr5	-	3434	1	novel_in_catalog	CLK4	novel	3722	13	NA	NA	1	-1842	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	3528	False	NA	NA
PB.11274.44	chr8	-	2370	16	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	1	-15	intron_retention	FALSE	canonical	1	20	junction_8	1973365.878680277	NA	13	2	TRUE	NA	NA	NA	C	coding	601	1806	504	2309	55.0	0	True	AAGAAA	-36
PB.7368.3	chr20	-	2197	10	novel_in_catalog	AURKA	novel	2238	10	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	1	45315	junction_9	152979.2902214763	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	218	1429	15.0	170	False	AATAAA	-15
PB.10280.1	chr6	+	2298	3	full-splice_match	PLEKHG1	ENST00000643692.1	2228	3	-22	-48	-2	48	multi-exon	FALSE	canonical	1	18	junction_2	5911.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-22	True	AATAAA	-15
PB.7152.8	chr20	+	2500	16	full-splice_match	CDC25B	ENST00000245960.9	3597	16	596	501	0	380	multi-exon	FALSE	canonical	1	374075	junction_1	178206.59527308933	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	102	1844	30.0	-8204	False	NA	NA
PB.7152.9	chr20	+	4287	10	novel_in_catalog	CDC25B	novel	2990	15	NA	NA	-1849	-5	intron_retention	FALSE	canonical	1	550461	junction_1	150357.73196982956	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	2260	3138	30.0	-9121	False	AATAAA	-16
PB.7152.6	chr20	+	2741	16	novel_in_catalog	CDC25B	novel	2990	15	NA	NA	-44	-3	no_combination_of_known_junctions	FALSE	canonical	1	2380	junction_1	238231.8611274506	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	184	1590	25.0	2	True	AATAAA	-18
PB.7152.7	chr20	+	3089	16	full-splice_match	CDC25B	ENST00000439880.6	3096	16	4	3	4	-3	multi-exon	FALSE	canonical	1	17516	junction_1	235373.5416670843	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	238	1938	25.0	-15	True	AATAAA	-18
PB.7152.4	chr20	+	4549	15	incomplete-splice_match	CDC25B	ENST00000344256.10	3071	16	9000	4	33	-1	5prime_fragment	FALSE	canonical	1	420954	junction_2	160140.74857744318	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	1987	3393	10.0	-17	True	AATAAA	-23
PB.7152.5	chr20	+	3714	17	novel_in_catalog	CDC25B	novel	2990	15	NA	NA	-46	-5	combination_of_known_junctions	FALSE	canonical	1	21188	junction_11	282044.782375616	NA	3	NA	TRUE	NA	NA	NA	C	coding	459	1380	744	2123	30.0	0	True	AATAAA	-16
PB.7152.2	chr20	+	2955	16	full-splice_match	CDC25B	ENST00000245960.9	3597	16	641	1	45	-1	multi-exon	FALSE	canonical	1	374075	junction_1	178206.59527308933	NA	2	NA	TRUE	NA	NA	NA	C	coding	580	1743	57	1799	10.0	1	True	AATAAA	-23
PB.7152.3	chr20	+	2262	17	novel_not_in_catalog	CDC25B	novel	2990	15	NA	NA	-23	-5	any annotated donor/acceptor	FALSE	canonical	1	15103	junction_16	240126.70195042834	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	265	2007	30.0	3	True	AATAAA	-16
PB.7152.1	chr20	+	2829	16	full-splice_match	CDC25B	ENST00000467519.5	1960	16	11	-880	11	-1	multi-exon	FALSE	canonical	1	31209	junction_1	232810.2413061953	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	267	1673	10.0	-39	True	AATAAA	-23
PB.10530.1	chr7	-	3413	22	full-splice_match	MYO1G	ENST00000258787.11	3267	22	13	-159	3	155	multi-exon	TRUE	canonical	1	351959	junction_21	111614.18420789787	NA	0	NA	TRUE	NA	NA	NA	C	coding	1018	3057	125	3181	25.0	7752	False	NA	NA
PB.10530.3	chr7	-	3411	21	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	-15	2	intron_retention	FALSE	canonical	1	351959	junction_20	113405.54423611748	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	55	1983	0.0	-1	True	AATAAA	-18
PB.10530.5	chr7	-	3356	21	full-splice_match	MYO1G	ENST00000648014.1	3086	21	-76	-194	-11	0	multi-exon	FALSE	canonical	1	351959	junction_20	110930.59966578202	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	149	3052	0.0	-6	True	AATAAA	-16
PB.10530.4	chr7	-	3187	22	full-splice_match	MYO1G	ENST00000258787.11	3267	22	83	-3	-15	-1	multi-exon	FALSE	canonical	1	351959	junction_21	111614.18420789787	NA	17	NA	TRUE	NA	NA	NA	C	coding	1018	3057	55	3111	0.0	-1	True	AATAAA	-15
PB.10530.7	chr7	-	4507	20	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	12696	junction_16	171625.57836957905	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	774	2228	0.0	2	True	AATAAA	-15
PB.11018.4	chr8	+	5355	8	full-splice_match	POLR3D	ENST00000397802.8	5494	8	139	0	-58	0	multi-exon	FALSE	canonical	1	173734	junction_3	86321.55188430226	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	77	1273	10.0	-58	False	ATTAAA	-21
PB.10530.9	chr7	-	2877	20	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	-8	-1	no_combination_of_known_junctions	FALSE	canonical	1	3967	junction_19	167260.8960685898	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2754	48	2801	0.0	6	True	AATAAA	-15
PB.7360.3	chr20	-	7645	28	full-splice_match	ATP9A	ENST00000338821.5	8106	28	197	264	-109	-264	multi-exon	TRUE	canonical	1	119372	junction_27	44001.577496974154	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	69	3212	15.0	13	True	AATAAA	-15
PB.7673.2	chr22	+	3433	2	incomplete-splice_match	MIAT	ENST00000616213.4	9943	4	8429	5874	8335	946	5prime_fragment	FALSE	canonical	1	37676	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	744	1190	95.0	-9273	False	NA	NA
PB.11274.45	chr8	-	2307	15	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	0	-15	intron_retention	FALSE	non_canonical	0	0	junction_8	1950790.975685416	NA	9	1	TRUE	NA	NA	NA	C	coding	339	1020	505	1524	55.0	-1	True	AAGAAA	-36
PB.644.14	chr1	+	1848	10	novel_not_in_catalog	TTF2	novel	9462	23	NA	NA	29	5506	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70475.75321386589	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1833	16	1848	70.0	5	True	NA	NA
PB.7673.1	chr22	+	4126	5	full-splice_match	MIAT	ENST00000620145.4	10069	5	70	5873	1	947	multi-exon	FALSE	canonical	1	94706	junction_1	6055.200631481999	NA	6	1	TRUE	NA	NA	NA	C	coding	104	315	1310	1624	100.0	2	True	NA	NA
PB.11442.11	chr9	+	5355	25	full-splice_match	RIC1	ENST00000418622.7	6658	25	-12	1315	-12	-1	multi-exon	FALSE	canonical	1	18267	junction_13	46228.429038354385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1386	4161	204	4364	35.0	0	True	AATAAA	-15
PB.11018.1	chr8	+	1901	9	novel_not_in_catalog	POLR3D	novel	1931	9	NA	NA	28	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	135810.51743329747	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	57	1253	30.0	-1	True	NA	NA
PB.7939.2	chr3	-	3073	8	novel_in_catalog	TAMM41	novel	746	3	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	20001	junction_4	68442.90583025968	NA	0	NA	TRUE	NA	NA	NA	B	coding	159	480	879	1358	25.0	15	True	AATAAA	-19
PB.7939.1	chr3	-	2948	7	novel_in_catalog	TAMM41	novel	746	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	104317	junction_6	31203.337110084165	NA	1	NA	TRUE	NA	NA	NA	B	coding	325	978	255	1232	25.0	-8	True	AATAAA	-20
PB.10235.19	chr6	+	3632	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	43	-459	intron_retention	FALSE	canonical	1	18466	junction_1	297011.4776073992	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	929	2662	15.0	-2	True	CATAAA	-36
PB.7069.8	chr2	+	2410	2	incomplete-splice_match	PTMA	ENST00000341369.11	1212	5	14	1	0	-1	intron_retention	FALSE	canonical	1	2301784	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-29
PB.7069.1	chr2	+	949	5	full-splice_match	PTMA	ENST00000409115.7	1221	5	14	258	7	-6	multi-exon	FALSE	canonical	1	2259437	junction_2	2210799.396057496	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	185	517	75.0	-7	True	NA	NA
PB.7069.3	chr2	+	1198	5	full-splice_match	PTMA	ENST00000409115.7	1221	5	17	6	-4	-1	multi-exon	FALSE	canonical	1	2259437	junction_2	2210799.396057496	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	182	514	35.0	-4	True	AATAAA	-29
PB.10301.8	chr6	+	3699	17	incomplete-splice_match	SNX9	ENST00000392185.7	4198	18	-16	2331	-16	-2331	3prime_fragment	FALSE	canonical	1	182032	junction_1	111140.02796006866	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	188	2074	25.0	2	True	AATAAA	-20
PB.6990.62	chr2	-	8043	45	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	1	intron_retention	FALSE	canonical	1	1096730	junction_7	2625424.7101979163	NA	0	NA	TRUE	NA	NA	NA	C	coding	2361	7086	267	7352	30.0	-1	True	AATAAA	-16
PB.7069.4	chr2	+	519	5	full-splice_match	PTMA	ENST00000409115.7	1221	5	17	685	-4	0	multi-exon	FALSE	canonical	1	2259437	junction_2	2210799.396057496	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	182	514	65.0	-4	True	NA	NA
PB.7069.7	chr2	+	2126	3	novel_in_catalog	PTMA	novel	784	5	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2301784	junction_1	380465.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	AATAAA	-30
PB.7069.6	chr2	+	1668	4	full-splice_match	PTMA	ENST00000481928.1	1635	4	-4	-29	-4	-1	multi-exon	FALSE	canonical	1	2301784	junction_1	2335835.0830387548	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-4	True	AATAAA	-29
PB.5122.1	chr17	+	2194	16	full-splice_match	TOM1L1	ENST00000575882.5	2507	16	309	4	-12	3	multi-exon	FALSE	canonical	1	180245	junction_2	91990.94770233282	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	45	1475	30.0	-31	False	AATAAA	-12
PB.2852.9	chr12	+	3701	16	novel_in_catalog	TXNRD1	novel	3836	17	NA	NA	0	1	intron_retention	FALSE	canonical	1	39077	junction_2	672305.2854695766	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	213	1838	25.0	-8	True	ATTAAA	-15
PB.5122.3	chr17	+	2430	10	full-splice_match	TOM1L1	ENST00000575333.5	1849	10	-121	-460	14	460	multi-exon	FALSE	canonical	1	180245	junction_2	110297.2329062041	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	131	1171	100.0	-117	False	NA	NA
PB.5122.2	chr17	+	4165	16	full-splice_match	TOM1L1	ENST00000575882.5	2507	16	219	-1877	10	1877	multi-exon	FALSE	canonical	1	180245	junction_2	91990.94770233282	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	135	1565	60.0	-121	False	ATTAAA	-9
PB.5122.5	chr17	+	2149	16	novel_not_in_catalog	TOM1L1	novel	2442	11	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	438	junction_10	125256.52247430292	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	62	1180	45.0	4	True	AATAAA	-9
PB.5122.4	chr17	+	2034	16	full-splice_match	TOM1L1	ENST00000575882.5	2507	16	266	207	-27	27	multi-exon	FALSE	canonical	1	180245	junction_2	91990.94770233282	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	88	1518	35.0	-74	False	TATAAA	-14
PB.5122.7	chr17	+	3717	16	full-splice_match	TOM1L1	ENST00000575882.5	2507	16	305	-1515	12	1515	multi-exon	FALSE	canonical	1	180245	junction_2	91990.94770233282	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	49	1479	20.0	-35	False	AATATA	-24
PB.5122.6	chr17	+	1870	10	full-splice_match	TOM1L1	ENST00000575333.5	1849	10	-23	2	0	-2	multi-exon	FALSE	canonical	1	180245	junction_2	110297.2329062041	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	33	1073	25.0	-19	True	AGTAAA	-18
PB.5122.9	chr17	+	2147	16	full-splice_match	TOM1L1	ENST00000445275.6	2228	16	81	0	-1	0	multi-exon	FALSE	canonical	1	16668	junction_12	120873.32535226934	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	34	1431	45.0	-20	True	AATAAA	-9
PB.5122.8	chr17	+	3818	16	full-splice_match	TOM1L1	ENST00000575882.5	2507	16	319	-1630	-2	1630	multi-exon	FALSE	canonical	1	180245	junction_2	91990.94770233282	NA	3	NA	TRUE	NA	NA	NA	C	coding	476	1431	35	1465	45.0	-21	True	AATAAA	-20
PB.2852.2	chr12	+	3716	15	full-splice_match	TXNRD1	ENST00000526691.5	3974	15	258	0	82	0	multi-exon	FALSE	canonical	1	361604	junction_1	446744.20790213055	NA	3	NA	TRUE	NA	NA	NA	C	coding	549	1650	199	1848	15.0	-8379	False	ATTAAA	-20
PB.2852.3	chr12	+	3821	17	full-splice_match	TXNRD1	ENST00000526390.5	3808	17	-10	-3	-10	0	multi-exon	TRUE	canonical	1	4115	junction_3	758784.0239924892	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	334	1959	30.0	-9	True	ATTAAA	-14
PB.2852.4	chr12	+	3767	15	novel_not_in_catalog	TXNRD1	novel	3836	17	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	11249	junction_1	527095.9941302999	NA	2	NA	TRUE	NA	NA	NA	C	coding	497	1494	386	1879	20.0	-9	True	ATTAAA	-40
PB.2852.5	chr12	+	3640	15	novel_not_in_catalog	TXNRD1	novel	3836	17	NA	NA	-7	1	intron_retention	FALSE	canonical	1	21375	junction_14	759492.4985653417	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	164	1630	10.0	-6	True	ATTAAA	-21
PB.2852.6	chr12	+	3663	16	novel_not_in_catalog	TXNRD1	novel	3836	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_15	616059.6596260102	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	348	1997	15.0	1	True	ATTAAA	-20
PB.2852.7	chr12	+	3388	13	novel_in_catalog	TXNRD1	novel	3836	17	NA	NA	0	-2	intron_retention	FALSE	canonical	1	534	junction_1	567775.7450258322	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	143	1522	15.0	6	True	ATTAAA	-18
PB.1422.1	chr10	+	1817	8	novel_in_catalog	CDK1	novel	723	6	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	4514	junction_1	419765.6873513496	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	49	942	20.0	-9650	False	ATTAAA	-14
PB.1422.2	chr10	+	1295	8	full-splice_match	CDK1	ENST00000395284.7	1913	8	0	618	0	-594	multi-exon	FALSE	canonical	1	731005	junction_1	226562.72365181925	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	143	1036	40.0	-9633	False	AATAAA	-29
PB.1422.3	chr10	+	4162	7	novel_in_catalog	CDK1	novel	723	6	NA	NA	11	0	intron_retention	FALSE	canonical	1	731005	junction_1	241183.86558696712	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	129	458	40.0	-9619	False	ATTAAA	-7
PB.1422.4	chr10	+	3276	8	full-splice_match	CDK1	ENST00000395284.7	1913	8	15	-1378	12	1378	multi-exon	FALSE	canonical	1	731005	junction_1	226562.72365181925	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	128	1021	50.0	-9618	False	ATTAAA	-9
PB.1422.5	chr10	+	4582	2	incomplete-splice_match	CDK1	ENST00000519760.1	276	3	21	-1036	-15	1036	intron_retention	FALSE	canonical	1	731005	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.1422.6	chr10	+	3474	7	novel_in_catalog	CDK1	novel	723	6	NA	NA	-14	-662	intron_retention	FALSE	canonical	1	731005	junction_1	241183.86558696712	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	118	447	30.0	1	True	AATATA	-15
PB.1422.7	chr10	+	1154	8	full-splice_match	CDK1	ENST00000395284.7	1913	8	25	734	-14	-710	multi-exon	FALSE	canonical	1	731005	junction_1	226562.72365181925	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	118	1011	55.0	1	True	AATATA	-5
PB.1422.8	chr10	+	2421	8	full-splice_match	CDK1	ENST00000395284.7	1913	8	25	-533	-14	533	multi-exon	FALSE	canonical	1	731005	junction_1	226562.72365181925	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	118	1011	20.0	1	True	AATAGA	-15
PB.1422.9	chr10	+	1980	8	novel_in_catalog	CDK1	novel	723	6	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	1	39176	junction_1	409034.2558981124	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	216	1109	30.0	1	True	ATTAAA	-10
PB.6990.63	chr2	-	8031	46	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1194474	junction_7	3001561.762681232	NA	0	NA	TRUE	NA	NA	NA	C	coding	2357	7074	267	7340	30.0	-1	True	AATAAA	-16
PB.11321.1	chr8	-	2603	2	antisense	novelGene_ZHX2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	59	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATGAA	-2
PB.10301.2	chr6	+	3991	19	novel_not_in_catalog	SNX9	novel	542	6	NA	NA	-56	-573	any annotated donor/acceptor	FALSE	canonical	1	2261	junction_4	174436.01401178885	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	1138	2325	45.0	-38	True	AATAAA	-18
PB.8271.1	chr3	+	2329	5	full-splice_match	PCNP	ENST00000265260.7	2342	5	85	-72	-6	72	multi-exon	FALSE	canonical	1	221699	junction_2	233417.51706906554	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	37	573	10.0	0	True	TTTAAA	-17
PB.9411.1	chr5	+	2367	24	full-splice_match	HSD17B4	ENST00000510025.6	2628	24	-24	285	0	31	multi-exon	FALSE	canonical	1	280855	junction_5	288744.2714173176	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	104	2314	30.0	0	True	AATAAA	-30
PB.11610.2	chr9	-	1623	4	full-splice_match	RFK	ENST00000376736.5	2684	4	-26	1087	-14	377	multi-exon	FALSE	canonical	1	179562	junction_3	51716.45601632897	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	361	828	10.0	-15	True	AGTAAA	-18
PB.6713.7	chr2	+	2926	1	novel_in_catalog	TMEM177	novel	1346	2	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	338	1017	1581	2597	0.0	-8	True	NA	NA
PB.1270.4	chr10	-	3208	1	genic	ADARB2	novel	NA	NA	NA	NA	-48	-518641	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	100	303	375	677	100.0	-1	True	NA	NA
PB.1270.3	chr10	-	3858	1	genic	ADARB2	novel	NA	NA	NA	NA	-48	-517991	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	100	303	375	677	80.0	-1	True	ATTAAA	-19
PB.1270.2	chr10	-	2050	2	novel_not_in_catalog	ADARB2	novel	8421	10	NA	NA	-48	-457514	any annotated donor/acceptor	FALSE	canonical	1	230	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-20
PB.1270.1	chr10	-	2705	2	novel_not_in_catalog	ADARB2	novel	8421	10	NA	NA	-71	-428083	any annotated donor/acceptor	FALSE	canonical	1	587	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-24	False	NA	NA
PB.11256.9	chr8	+	3584	11	novel_in_catalog	MTDH	novel	6177	12	NA	NA	-3	1072	combination_of_known_junctions	FALSE	canonical	1	46678	junction_9	377771.99500884133	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	332	1939	15.0	-8	True	AATAAA	-15
PB.9769.8	chr6	-	2890	12	novel_in_catalog	DEK	novel	3427	11	NA	NA	11	15	intron_retention	FALSE	canonical	1	25690	junction_5	765356.9285215993	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	150	1007	65.0	-1	True	TATAAA	-8
PB.11495.12	chr9	-	2927	18	full-splice_match	DDX58	ENST00000379883.2	4353	18	121	1305	5	-1305	multi-exon	FALSE	canonical	1	131787	junction_17	45602.26363326176	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2778	38	2815	40.0	-9	True	AATATA	-7
PB.9411.4	chr5	+	2696	25	novel_not_in_catalog	HSD17B4	novel	2685	24	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	175	junction_3	364270.7901873866	NA	9	1	TRUE	NA	NA	NA	C	coding	599	1800	560	2359	5.0	7	True	AATAAA	-16
PB.6713.2	chr2	+	1735	2	full-splice_match	TMEM177	ENST00000424086.5	1738	2	3	0	0	0	multi-exon	FALSE	canonical	1	13540	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	471	1406	0.0	0	True	NA	NA
PB.8599.19	chr3	+	3287	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	337	-1698	337	1698	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	254	1174	55.0	1	True	TTTAAA	-3
PB.10808.12	chr7	-	2255	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	54	199	28	-199	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	2	NA	TRUE	NA	NA	NA	C	coding	227	684	161	844	35.0	111	False	AATAAA	-17
PB.924.1	chr1	+	2898	24	novel_not_in_catalog	C1orf112	novel	3849	29	NA	NA	-3	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43121.78825466047	NA	0	NA	TRUE	NA	NA	NA	B	coding	911	2736	64	2799	45.0	-5	True	TATAAA	-19
PB.924.3	chr1	+	3075	24	novel_not_in_catalog	C1orf112	novel	3849	29	NA	NA	2	183	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43121.78825466047	NA	0	NA	TRUE	NA	NA	NA	B	coding	911	2736	59	2794	45.0	0	True	AATAAA	-22
PB.6713.1	chr2	+	1343	2	full-splice_match	TMEM177	ENST00000401466.5	1346	2	3	0	0	0	multi-exon	FALSE	canonical	1	26250	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	79	1014	0.0	0	True	NA	NA
PB.924.4	chr1	+	3877	24	novel_not_in_catalog	C1orf112	novel	3849	29	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43121.78825466047	NA	0	NA	TRUE	NA	NA	NA	B	coding	911	2736	56	2791	50.0	3	True	AATAAA	-20
PB.10808.14	chr7	-	2326	10	novel_not_in_catalog	FAM3C	novel	2508	10	NA	NA	293	-199	any annotated donor/acceptor	FALSE	canonical	1	157	junction_7	10580.124521426433	NA	4	NA	TRUE	NA	NA	NA	C	coding	227	684	232	915	35.0	376	False	AATAAA	-17
PB.10455.1	chr7	+	3811	3	full-splice_match	HOXA-AS3	ENST00000521197.5	687	3	102	-3226	102	-5	multi-exon	FALSE	canonical	1	2336	junction_1	1759.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	147	444	615	1058	45.0	-2	True	AATAAA	-19
PB.9667.16	chr5	+	3232	15	full-splice_match	CANX	ENST00000452673.6	4207	15	31	944	-7	332	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	117	1895	25.0	-45	True	AATAAA	-25
PB.9667.15	chr5	+	4505	16	novel_in_catalog	CANX	novel	585	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	3295	junction_1	1895576.2429954575	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1827	398	2224	15.0	-45	True	ATTAAA	-18
PB.9667.14	chr5	+	4887	15	full-splice_match	CANX	ENST00000452673.6	4207	15	31	-711	-7	711	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	117	1895	55.0	-45	True	AATAAA	-18
PB.9667.13	chr5	+	2335	15	full-splice_match	CANX	ENST00000247461.8	4260	15	108	1817	-12	201	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	93	1871	45.0	32	True	TTTAAA	-37
PB.12366.1	chrX	-	3433	2	full-splice_match	RAB39B	ENST00000369454.3	3505	2	75	-3	75	3	multi-exon	FALSE	canonical	1	61788	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	227	868	20.0	-3	True	AGTAAA	-20
PB.12366.2	chrX	-	2920	2	full-splice_match	RAB39B	ENST00000369454.3	3505	2	98	487	98	-487	multi-exon	FALSE	canonical	1	61788	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	204	845	80.0	-6	True	NA	NA
PB.12366.3	chrX	-	2476	2	full-splice_match	RAB39B	ENST00000369454.3	3505	2	77	952	77	-952	multi-exon	FALSE	canonical	1	61788	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	225	866	65.0	-1	True	NA	NA
PB.865.1	chr1	-	1773	11	full-splice_match	USF1	ENST00000368021.7	1807	11	35	-1	-3	1	multi-exon	TRUE	canonical	1	348042	junction_2	158927.00638497536	NA	2	NA	TRUE	NA	NA	NA	C	coding	310	933	171	1103	5.0	-5	True	GATAAA	-16
PB.865.3	chr1	-	2014	1	novel_in_catalog	USF1	novel	1807	11	NA	NA	0	-2357	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	151	456	51	506	95.0	-1	True	NA	NA
PB.865.2	chr1	-	1733	11	full-splice_match	USF1	ENST00000473969.6	1092	11	26	-667	3	-2	multi-exon	FALSE	canonical	1	140303	junction_7	199862.75031170764	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	311	1066	10.0	1	True	GATAAA	-13
PB.1051.12	chr1	+	4565	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-24	2	no_combination_of_known_junctions	FALSE	canonical	1	4080	junction_1	197577.27916282733	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	406	2838	30.0	7	True	AATAAA	-20
PB.9667.19	chr5	+	1738	13	incomplete-splice_match	CANX	ENST00000247461.8	4260	15	38	6211	0	-2021	3prime_fragment	FALSE	canonical	1	2163393	junction_1	1100752.0811135096	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1575	163	1737	60.0	-38	True	AAGAAA	-29
PB.9667.18	chr5	+	4169	15	full-splice_match	CANX	ENST00000452673.6	4207	15	38	0	0	0	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	110	1888	15.0	-38	True	ATTAAA	-18
PB.11984.17	chrX	-	2111	2	incomplete-splice_match	AP1S2	ENST00000380291.5	3492	5	-5	20477	-5	-19093	3prime_fragment	FALSE	canonical	1	50572	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	68	207	123	329	90.0	3	True	NA	NA
PB.11984.16	chrX	-	2973	5	full-splice_match	AP1S2	ENST00000380291.5	3492	5	5	514	5	-514	multi-exon	FALSE	canonical	1	127	junction_3	20966.352818265746	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	113	595	55.0	13	True	AATAAA	-22
PB.11984.15	chrX	-	3499	5	full-splice_match	AP1S2	ENST00000380291.5	3492	5	-9	2	-9	-2	multi-exon	FALSE	canonical	1	127	junction_3	20966.352818265746	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	1	609	20.0	-1	True	AATAAA	-12
PB.11984.14	chrX	-	2142	6	novel_in_catalog	AP1S2	novel	2237	5	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	127	junction_4	26287.723588017278	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	1	570	25.0	-1	True	AATAAA	-13
PB.9027.11	chr4	-	1857	11	full-splice_match	FBXW7	ENST00000393956.8	3540	11	123	1560	51	-4	multi-exon	FALSE	canonical	1	68943	junction_10	61957.84557584293	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	21	1799	70.0	-1	True	NA	NA
PB.11984.12	chrX	-	4017	5	novel_in_catalog	AP1S2	novel	2237	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	127	junction_3	29340.922066075225	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	1	570	25.0	-1	True	AATAAA	-13
PB.11984.11	chrX	-	2040	5	novel_in_catalog	AP1S2	novel	2237	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	127	junction_3	26004.329989205642	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	105	566	20.0	21	True	AATAAA	-14
PB.11984.10	chrX	-	3591	6	novel_in_catalog	AP1S2	novel	2237	5	NA	NA	-9	9	no_combination_of_known_junctions	FALSE	canonical	1	127	junction_4	26243.513243466467	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	1	570	20.0	-1	True	AATAAA	-23
PB.8362.8	chr3	-	4132	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	65	5454	-11	1044	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	422	2806	25.0	21	False	AATAAA	-18
PB.8362.9	chr3	-	4071	9	full-splice_match	ZNF148	ENST00000484491.5	2952	9	-58	-1061	6	1044	multi-exon	FALSE	canonical	1	23523	junction_6	69434.16795200689	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	361	2745	25.0	3	True	AATAAA	-18
PB.11313.8	chr8	-	3897	27	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	84871.11072460817	NA	1	1	TRUE	NA	NA	NA	B	coding	1037	3111	787	3897	70.0	-1	True	NA	NA
PB.1509.8	chr10	+	3421	14	novel_not_in_catalog	BMPR1A	novel	5632	14	NA	NA	102	20	any annotated donor/acceptor	FALSE	canonical	1	20	junction_8	14495.185306746618	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	515	2029	25.0	-18	False	AATAAA	-21
PB.1596.2	chr10	-	3379	21	full-splice_match	CHUK	ENST00000370397.7	3625	21	176	70	176	-1	multi-exon	FALSE	canonical	1	162873	junction_20	47209.05163766267	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	104	2149	20.0	7856	False	ATTAAA	-14
PB.1596.3	chr10	-	3527	21	novel_not_in_catalog	CHUK	novel	3625	21	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	18921	junction_2	66533.41634267326	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	76	2235	15.0	-12	True	ATTAAA	-15
PB.1596.4	chr10	-	3778	22	novel_not_in_catalog	CHUK	novel	3625	21	NA	NA	12	-1	any annotated donor/acceptor	FALSE	canonical	1	11498	junction_2	80016.17091778805	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	76	2304	20.0	-12	True	ATTAAA	-14
PB.9541.9	chr5	-	6065	1	novel_in_catalog	YIPF5	novel	3147	6	NA	NA	8	-724	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	coding	60	183	172	354	90.0	0	True	NA	NA
PB.1596.6	chr10	-	3055	21	full-splice_match	CHUK	ENST00000370397.7	3625	21	22	548	22	346	multi-exon	FALSE	canonical	1	162873	junction_20	47209.05163766267	NA	2	NA	TRUE	NA	NA	NA	C	coding	745	2238	66	2303	35.0	-2	True	NA	NA
PB.1414.2	chr10	-	5453	9	full-splice_match	ZWINT	ENST00000373944.7	1872	9	3	-3584	1	3584	multi-exon	FALSE	canonical	1	731231	junction_7	131234.88042699432	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	37	870	20.0	-14	True	ATTAAA	-19
PB.9541.4	chr5	-	3703	5	novel_in_catalog	YIPF5	novel	3147	6	NA	NA	10	-2	intron_retention	FALSE	canonical	1	568989	junction_1	67443.95447100874	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	97	561	30.0	31	True	ATTAAA	-13
PB.9541.5	chr5	-	1897	6	full-splice_match	YIPF5	ENST00000274496.9	3147	6	16	1234	-3	-120	multi-exon	FALSE	canonical	1	523994	junction_2	73685.94738103054	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	120	893	75.0	8	True	NA	NA
PB.10673.3	chr7	-	11519	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	25	-10079	25	-140	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	4	NA	TRUE	NA	NA	NA	C	coding	326	981	460	1440	80.0	-1	True	NA	NA
PB.9541.7	chr5	-	1416	6	full-splice_match	YIPF5	ENST00000274496.9	3147	6	8	1723	8	596	multi-exon	FALSE	canonical	1	523994	junction_2	73685.94738103054	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	128	901	45.0	0	True	NA	NA
PB.6535.26	chr2	-	5343	4	full-splice_match	TIA1	ENST00000496452.5	853	4	-20	-4470	0	-2	multi-exon	FALSE	canonical	1	469380	junction_3	59683.400820961564	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	231	557	15.0	88	False	AATAAA	-11
PB.9541.2	chr5	-	3118	6	full-splice_match	YIPF5	ENST00000274496.9	3147	6	21	8	2	-8	multi-exon	FALSE	canonical	1	523994	junction_2	73685.94738103054	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	115	888	35.0	13	True	NA	NA
PB.9541.3	chr5	-	2039	6	full-splice_match	YIPF5	ENST00000274496.9	3147	6	-3	1111	-3	3	multi-exon	FALSE	canonical	1	523994	junction_2	73685.94738103054	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	139	912	30.0	-11	True	ATTAAA	-18
PB.7669.1	chr22	+	3982	7	full-splice_match	SRRD	ENST00000215917.11	4020	7	1	37	1	-37	multi-exon	FALSE	canonical	1	126721	junction_1	91441.32393264849	NA	2	NA	TRUE	NA	NA	NA	A	coding	339	1020	14	1033	45.0	1	True	NA	NA
PB.3312.1	chr14	+	3620	7	novel_in_catalog	OXA1L	novel	1719	10	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	1419110	junction_1	440659.3264298208	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	2796	3395	20.0	-4389	False	AGTAAA	-13
PB.3312.2	chr14	+	1756	9	novel_not_in_catalog	OXA1L	novel	1719	10	NA	NA	0	-6	intron_retention	FALSE	canonical	1	16610	junction_3	800370.3414062455	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	932	1531	20.0	-4388	False	AGTAAA	-13
PB.3312.3	chr14	+	2096	10	full-splice_match	OXA1L	ENST00000604262.5	1571	10	-3	-522	1	522	multi-exon	FALSE	canonical	1	1327737	junction_3	475364.9084831671	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	27	1334	95.0	-4387	False	NA	NA
PB.3312.4	chr14	+	1552	10	full-splice_match	OXA1L	ENST00000604262.5	1571	10	4	15	4	-6	multi-exon	FALSE	canonical	1	1327737	junction_3	475364.9084831671	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	20	1327	20.0	-5	True	AGTAAA	-13
PB.3312.5	chr14	+	1734	9	novel_in_catalog	OXA1L	novel	1719	10	NA	NA	4	-6	intron_retention	FALSE	canonical	1	1327737	junction_3	479258.4021336865	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	20	817	20.0	-5	True	AGTAAA	-13
PB.3312.6	chr14	+	4379	6	novel_in_catalog	OXA1L	novel	1719	10	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	1753511	junction_1	339471.8467107398	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	3554	4153	15.0	1	True	AGTAAA	-14
PB.11825.18	chr9	+	3153	21	incomplete-splice_match	SPTAN1	ENST00000358161.9	7794	55	56526	2	180	1	5prime_fragment	FALSE	canonical	1	908657	junction_1	337144.89945889363	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	26	2827	15.0	NA	False	AATAAA	-16
PB.11313.6	chr8	-	5006	26	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-7	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_25	81710.00912984896	NA	25	4	TRUE	NA	NA	NA	B	coding	988	2967	891	3857	15.0	-1	True	AATAAA	-16
PB.9076.1	chr4	-	2059	1	antisense	novelGene_SPCS3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-10018	False	TTTAAA	-29
PB.9221.9	chr5	+	3664	2	incomplete-splice_match	PELO	ENST00000274311.2	4349	3	12151	4	12138	-4	5prime_fragment	FALSE	canonical	1	496796	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	385	1158	305	1462	30.0	-21	True	AATAAA	-23
PB.12358.1	chrX	-	4822	10	full-splice_match	GAB3	ENST00000424127.2	2028	10	-80	-2714	-80	1	multi-exon	FALSE	canonical	1	22848	junction_9	12916.302129145091	NA	2	NA	TRUE	NA	NA	NA	A	coding	550	1653	244	1896	30.0	408	False	AATAAA	-15
PB.9571.19	chr5	-	2381	24	novel_not_in_catalog	ANXA6	novel	451	4	NA	NA	6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	768141.270894926	NA	5	1	TRUE	NA	NA	NA	C	coding	537	1614	126	1739	35.0	-1	True	AAAACA	-18
PB.9362.15	chr5	-	1922	6	incomplete-splice_match	CHD1	ENST00000614616.4	8095	36	-768	47201	-768	-18052	3prime_fragment	FALSE	canonical	1	65261	junction_5	88472.21791636062	NA	4	NA	TRUE	NA	NA	NA	C	coding	190	570	1352	1921	10.0	-12	True	AAAACA	-29
PB.6733.9	chr2	-	4355	8	full-splice_match	AMMECR1L	ENST00000272647.9	4658	8	-2	305	-2	-298	multi-exon	FALSE	canonical	1	70418	junction_5	39749.48910671555	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	264	1196	35.0	-1557	False	AATAAA	-13
PB.1509.1	chr10	+	3418	13	novel_not_in_catalog	BMPR1A	novel	5632	14	NA	NA	-582	-4553	any annotated donor/acceptor	TRUE	canonical	1	20	junction_8	15046.383252204572	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	354	1952	25.0	-751	False	AATAAA	-17
PB.4680.11	chr17	-	1743	5	full-splice_match	UBE2G1	ENST00000571980.1	984	5	108	-867	-38	550	multi-exon	FALSE	canonical	1	41408	junction_3	364646.3498633813	NA	3	NA	TRUE	NA	NA	NA	C	coding	105	318	302	619	15.0	-3	True	AATATA	-17
PB.4680.10	chr17	-	1850	6	full-splice_match	UBE2G1	ENST00000396981.6	3974	6	-50	2174	-50	547	multi-exon	FALSE	canonical	1	499122	junction_5	170247.27137361118	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	217	729	20.0	142	False	AATATA	-14
PB.4680.13	chr17	-	1968	6	novel_not_in_catalog	UBE2G1	novel	3974	6	NA	NA	-19	543	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	413301.2203967465	NA	21	2	TRUE	NA	NA	NA	C	coding	140	423	429	851	30.0	27	True	AATATA	-10
PB.4680.12	chr17	-	1758	6	novel_not_in_catalog	UBE2G1	novel	3974	6	NA	NA	510	544	any annotated donor/acceptor	FALSE	canonical	1	2668	junction_5	340203.8151864849	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	341	640	30.0	-1	True	AATATA	-11
PB.9571.11	chr5	-	2451	25	novel_in_catalog	ANXA6	novel	451	4	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	8216	junction_24	809166.7620138107	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	188	2113	35.0	-10	True	AAAACA	-18
PB.1414.9	chr10	-	1870	8	full-splice_match	ZWINT	ENST00000395405.5	1851	8	-19	0	-17	0	multi-exon	FALSE	canonical	1	731231	junction_6	140278.1919541251	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	57	890	10.0	-34	False	NA	NA
PB.7760.5	chr22	+	1732	7	novel_not_in_catalog	TRIOBP	novel	10145	24	NA	NA	18	-2	intron_retention	FALSE	canonical	1	73751	junction_2	266466.51902928314	NA	5	NA	TRUE	NA	NA	NA	C	coding	346	1041	76	1116	40.0	-4660	False	NA	NA
PB.7760.4	chr22	+	2193	14	novel_not_in_catalog	TRIOBP	novel	10145	24	NA	NA	-14	-17	any annotated donor/acceptor	FALSE	canonical	1	73751	junction_2	199242.27806072787	NA	2	NA	TRUE	NA	NA	NA	C	coding	580	1743	108	1850	90.0	-4692	False	AAAACA	-12
PB.1509.3	chr10	+	3234	13	full-splice_match	BMPR1A	ENST00000372037.7	11255	13	-111	8132	-62	-5032	multi-exon	FALSE	canonical	1	20	junction_8	14481.431738177685	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	649	2247	20.0	3	True	TTTAAA	-15
PB.4268.18	chr16	-	2627	17	full-splice_match	RRN3	ENST00000429751.6	2198	17	-31	-398	-27	398	multi-exon	FALSE	canonical	1	77	junction_14	161607.48446185852	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	48	1913	55.0	NA	False	AATATA	-26
PB.4268.17	chr16	-	2739	18	full-splice_match	RRN3	ENST00000198767.10	3762	18	15	1008	9	398	multi-exon	FALSE	canonical	1	741	junction_4	158416.15618731137	NA	1	1	TRUE	NA	NA	NA	C	coding	651	1956	70	2025	55.0	NA	False	AATATA	-26
PB.4268.16	chr16	-	3329	17	full-splice_match	RRN3	ENST00000429751.6	2198	17	-54	-1077	8	-316	multi-exon	FALSE	canonical	1	77	junction_14	161607.48446185852	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	71	1936	25.0	NA	False	AATAGA	-15
PB.4268.15	chr16	-	3374	18	full-splice_match	RRN3	ENST00000198767.10	3762	18	60	328	-4	-315	multi-exon	FALSE	canonical	1	741	junction_4	158416.15618731137	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	25	1980	25.0	NA	False	AATAGA	-16
PB.4268.14	chr16	-	3631	18	full-splice_match	RRN3	ENST00000198767.10	3762	18	35	96	29	-83	multi-exon	FALSE	canonical	1	741	junction_4	158416.15618731137	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	50	2005	60.0	NA	False	NA	NA
PB.4268.13	chr16	-	3594	17	novel_in_catalog	RRN3	novel	3762	18	NA	NA	-12	-4	intron_retention	FALSE	canonical	1	231	junction_9	163656.30369016447	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	33	1889	30.0	NA	False	AATAAA	-10
PB.7200.5	chr20	+	3711	16	novel_not_in_catalog	KIZ	novel	1971	11	NA	NA	-2	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	92247.00982721458	NA	2	1	TRUE	NA	NA	NA	C	coding	578	1737	59	1795	50.0	8	True	AATAAA	-7
PB.11824.4	chr9	+	3432	17	novel_not_in_catalog	GLE1	novel	3321	16	NA	NA	9	-5	any annotated donor/acceptor	FALSE	canonical	1	38910	junction_2	116221.81984833733	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	214	2319	45.0	-10	True	AATAAA	-14
PB.6640.1	chr2	+	3625	7	full-splice_match	CNNM4	ENST00000377075.2	4800	7	1155	20	1155	-20	multi-exon	FALSE	canonical	1	114640	junction_5	14994.633447411185	NA	0	NA	TRUE	NA	NA	NA	A	coding	415	1248	24	1271	40.0	-3011	False	AATAAA	-16
PB.10065.2	chr6	-	2163	3	novel_not_in_catalog	COX7A2	novel	914	5	NA	NA	-3	0	intron_retention	TRUE	non_canonical	0	0	junction_1	1909543.0	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-13	True	AATAAA	-14
PB.9393.2	chr5	+	4307	11	full-splice_match	DCP2	ENST00000389063.2	8947	11	20	4620	20	2501	multi-exon	TRUE	canonical	1	145061	junction_1	66647.01219477135	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	179	1441	25.0	-125	False	ATTAAA	-12
PB.9393.1	chr5	+	4617	11	full-splice_match	DCP2	ENST00000389063.2	8947	11	74	4256	-3	2865	multi-exon	FALSE	canonical	1	145061	junction_1	66647.01219477135	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	125	1387	15.0	9	True	ATTAAA	-17
PB.2407.2	chr12	-	2308	11	novel_not_in_catalog	TNFRSF1A	novel	2069	9	NA	NA	-14	-18	any annotated donor/acceptor	FALSE	canonical	1	15773	junction_5	498862.6943810892	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	1100	1771	25.0	-24	True	ACTAAA	-11
PB.2407.3	chr12	-	2131	10	full-splice_match	TNFRSF1A	ENST00000162749.6	2223	10	74	18	1	-18	multi-exon	FALSE	canonical	1	758291	junction_1	220337.27330062783	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	227	1594	25.0	-14	True	ACTAAA	-11
PB.9905.2	chr6	+	1229	2	incomplete-splice_match	PSMB8-AS1	ENST00000458296.1	958	3	699	-675	669	-1	5prime_fragment	FALSE	canonical	1	31659	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	63	192	287	478	10.0	-26	True	AATAAA	-14
PB.2407.1	chr12	-	2135	9	novel_in_catalog	TNFRSF1A	novel	2069	9	NA	NA	4	-10	combination_of_known_junctions	FALSE	canonical	1	45779	junction_4	418978.42342698196	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	919	1590	15.0	-35	True	ACTAAA	-19
PB.7435.4	chr21	-	4585	6	novel_in_catalog	GATD3B	novel	411	6	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	69	662	20.0	NA	False	AATAAA	-13
PB.7435.5	chr21	-	3541	4	incomplete-splice_match	GATD3B	ENST00000624120.3	898	6	-70	4794	-17	-282	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	197	594	89	682	20.0	NA	False	AATAAA	-31
PB.12007.4	chrX	+	5431	8	novel_in_catalog	ZFX	novel	475	3	NA	NA	0	-1794	combination_of_known_junctions	FALSE	canonical	1	42584	junction_1	78271.42703386956	NA	5	NA	TRUE	NA	NA	NA	C	coding	805	2418	95	2512	70.0	0	True	ATTAAA	-32
PB.12007.5	chrX	+	4864	6	full-splice_match	ZFX	ENST00000539115.5	6801	6	86	1851	2	-1685	multi-exon	FALSE	canonical	1	143	junction_1	100096.46521950714	NA	3	NA	TRUE	NA	NA	NA	C	coding	576	1731	106	1836	25.0	2	True	AATAAA	-21
PB.12007.6	chrX	+	5878	11	full-splice_match	ZFX	ENST00000379177.5	7558	11	-5	1685	-5	-1685	multi-exon	FALSE	canonical	1	13236	junction_3	97798.27916180325	NA	4	NA	TRUE	NA	NA	NA	C	coding	805	2418	433	2850	25.0	11	True	AATAAA	-21
PB.12007.7	chrX	+	5434	7	novel_in_catalog	ZFX	novel	475	3	NA	NA	4	-1685	no_combination_of_known_junctions	FALSE	canonical	1	1931	junction_1	92523.19906995699	NA	2	NA	TRUE	NA	NA	NA	C	coding	780	2343	64	2406	25.0	20	True	AATAAA	-21
PB.12007.1	chrX	+	7228	8	novel_in_catalog	ZFX	novel	475	3	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	42584	junction_1	78271.42703386956	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	99	2516	15.0	-4	True	AATAAA	-21
PB.12007.2	chrX	+	5866	10	full-splice_match	ZFX	ENST00000304543.9	2996	10	-63	-2807	-2	-1582	multi-exon	FALSE	canonical	1	19039	junction_1	88411.06718108749	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	318	2735	20.0	-2	True	AATAAA	-16
PB.12007.3	chrX	+	5761	10	full-splice_match	ZFX	ENST00000304543.9	2996	10	-61	-2704	0	-1685	multi-exon	FALSE	canonical	1	19039	junction_1	88411.06718108749	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	316	2733	25.0	0	True	AATAAA	-21
PB.8588.2	chr3	-	1368	11	full-splice_match	RFC4	ENST00000296273.6	1384	11	20	-4	-10	-1	multi-exon	FALSE	canonical	1	348920	junction_10	99120.4941139823	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	204	1295	50.0	-19	True	AATAAA	-24
PB.8588.3	chr3	-	3107	8	novel_in_catalog	RFC4	novel	1111	9	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	464891	junction_5	85691.87988487638	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	1797	2696	45.0	-47	True	AATAAA	-23
PB.8588.1	chr3	-	2820	8	full-splice_match	RFC4	ENST00000494047.5	1393	8	1	-1428	1	0	multi-exon	FALSE	canonical	1	348920	junction_7	112511.8444796106	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	190	1101	50.0	-5	True	AATAAA	-25
PB.8588.4	chr3	-	3663	6	novel_in_catalog	RFC4	novel	1111	9	NA	NA	-10	2	intron_retention	FALSE	canonical	1	348920	junction_5	63499.76912209996	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	204	788	45.0	-19	True	AATAAA	-22
PB.847.1	chr1	-	2155	7	full-splice_match	IGSF8	ENST00000314485.11	2343	7	180	8	180	2	multi-exon	FALSE	canonical	1	202935	junction_6	154345.6913500773	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	38	1879	30.0	-21	True	AATAAA	-11
PB.11176.4	chr8	-	8480	23	novel_not_in_catalog	NCOA2	novel	8447	23	NA	NA	457	-12	intron_retention	FALSE	canonical	1	15754	junction_22	49138.18035597453	NA	0	NA	TRUE	NA	NA	NA	C	coding	1464	4395	228	4622	30.0	868	False	AATAAA	-30
PB.11176.6	chr8	-	8239	22	novel_in_catalog	NCOA2	novel	8447	23	NA	NA	-15	-16	intron_retention	FALSE	canonical	1	35459	junction_10	53379.722340995875	NA	5	NA	TRUE	NA	NA	NA	C	coding	1395	4188	198	4385	25.0	-13	True	AATAAA	-26
PB.8431.2	chr3	+	1989	1	novel_in_catalog	AC097103.2	novel	602	3	NA	NA	0	-31223	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	-7	True	AATAAA	-33
PB.4050.4	chr15	+	4257	11	full-splice_match	ZNF592	ENST00000560079.6	8131	11	-63	3937	-63	57	multi-exon	FALSE	canonical	1	78582	junction_1	104196.77357716026	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	352	4155	15.0	-20	True	AATAAA	-25
PB.4050.5	chr15	+	4817	9	novel_in_catalog	ZNF592	novel	8131	11	NA	NA	-60	859	no_combination_of_known_junctions	FALSE	canonical	1	5410	junction_1	120908.30768267125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	110	3913	15.0	-17	True	AATAAA	-16
PB.4050.6	chr15	+	4119	10	novel_in_catalog	ZNF592	novel	8131	11	NA	NA	-56	56	no_combination_of_known_junctions	FALSE	canonical	1	39392	junction_2	114600.742313865	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	215	4018	15.0	-13	True	AATAAA	-24
PB.4050.7	chr15	+	3250	9	novel_not_in_catalog	ZNF592	novel	8131	11	NA	NA	1325	861	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121984.04191532596	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	146	2344	15.0	NA	False	AATAAA	-18
PB.831.5	chr1	-	2716	4	novel_in_catalog	ISG20L2	novel	3178	3	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	1	22726	junction_3	216587.4987071558	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	205	1266	45.0	4	True	GATAAA	-13
PB.4050.1	chr15	+	5121	10	novel_in_catalog	ZNF592	novel	8131	11	NA	NA	-233	860	no_combination_of_known_junctions	FALSE	canonical	1	4258	junction_1	117352.42038975307	NA	8	NA	TRUE	NA	NA	NA	C	coding	1267	3804	413	4216	15.0	-190	False	AATAAA	-17
PB.4050.2	chr15	+	4941	10	novel_in_catalog	ZNF592	novel	8131	11	NA	NA	-74	860	no_combination_of_known_junctions	FALSE	canonical	1	39392	junction_2	114600.742313865	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	233	4036	15.0	-31	True	AATAAA	-17
PB.4050.3	chr15	+	5065	11	full-splice_match	ZNF592	ENST00000560079.6	8131	11	-67	3133	-67	861	multi-exon	FALSE	canonical	1	78582	junction_1	104196.77357716026	NA	0	NA	TRUE	NA	NA	NA	C	coding	1267	3804	356	4159	15.0	-24	True	AATAAA	-18
PB.7408.21	chr20	+	3093	12	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	-2	-8	intron_retention	FALSE	canonical	0	0	junction_5	82190.14022968453	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	127	972	45.0	-4	True	ATTAAA	-7
PB.7408.20	chr20	+	2496	13	full-splice_match	SLC17A9	ENST00000370351.8	3580	13	89	995	25	-7	multi-exon	FALSE	canonical	1	76591	junction_5	64843.04355192151	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	96	1406	45.0	27	True	ATTAAA	-8
PB.5511.1	chr18	+	1922	8	full-splice_match	SERPINB7	ENST00000546027.5	1951	8	4	25	4	-19	multi-exon	FALSE	canonical	1	40827	junction_1	44760.3561839524	NA	0	NA	TRUE	NA	NA	NA	A	coding	380	1143	64	1206	65.0	0	True	NA	NA
PB.7408.22	chr20	+	3587	11	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	2	-8	intron_retention	FALSE	canonical	1	142234	junction_2	53296.11146237594	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	123	773	45.0	0	True	ATTAAA	-7
PB.5063.9	chr17	+	4364	2	full-splice_match	GOSR2	ENST00000571658.2	3820	2	10	-554	0	171	multi-exon	FALSE	canonical	1	498776	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-22	True	NA	NA
PB.5063.8	chr17	+	2108	7	full-splice_match	GOSR2	ENST00000225567.9	1245	7	13	-876	3	0	multi-exon	FALSE	canonical	1	15975	junction_6	185136.75031326318	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	61	702	45.0	-27	True	AATAAA	-20
PB.9911.5	chr6	+	4460	13	full-splice_match	BRD2	ENST00000374825.8	4894	13	254	180	-251	39	multi-exon	FALSE	canonical	1	133523	junction_1	628334.3293660264	NA	2	NA	TRUE	NA	NA	NA	C	coding	801	2406	1448	3853	20.0	-8898	False	AATAAA	-31
PB.9911.4	chr6	+	3028	10	incomplete-splice_match	BRD2	ENST00000374825.8	4894	13	314	3317	-191	-9	3prime_fragment	FALSE	canonical	1	133523	junction_1	641881.7143422826	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1641	1388	3028	75.0	-8838	False	NA	NA
PB.9911.3	chr6	+	3917	9	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-70	-9	intron_retention	FALSE	canonical	1	133523	junction_1	671956.9204612375	NA	18	NA	TRUE	NA	NA	NA	C	coding	416	1251	1772	3022	75.0	-13	True	NA	NA
PB.9911.2	chr6	+	4524	14	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-240	22	intron_retention	FALSE	canonical	1	133523	junction_1	758217.0638664188	NA	6	NA	TRUE	NA	NA	NA	C	coding	679	2040	1895	3934	30.0	-1	True	AATAAA	-14
PB.9911.1	chr6	+	3207	11	novel_in_catalog	BRD2	novel	4894	13	NA	NA	226	-10	intron_retention	FALSE	canonical	1	133523	junction_1	767028.2473133828	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1272	1934	3205	70.0	-8926	False	NA	NA
PB.11274.48	chr8	-	2253	15	novel_in_catalog	PABPC1	novel	608	3	NA	NA	115	-19	intron_retention	FALSE	canonical	1	141857	junction_11	1975523.125776941	NA	3	NA	TRUE	NA	NA	NA	C	coding	633	1902	295	2196	55.0	1	True	AAGAAA	-32
PB.5063.1	chr17	+	2754	6	full-splice_match	GOSR2	ENST00000640051.1	3964	6	-15	1225	-4	16	multi-exon	TRUE	canonical	1	434971	junction_2	40245.6637992219	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	81	719	10.0	-47	False	AATAAA	-15
PB.5063.3	chr17	+	4917	2	full-splice_match	GOSR2	ENST00000571658.2	3820	2	-2	-1095	-2	712	multi-exon	FALSE	canonical	1	498776	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-34	True	NA	NA
PB.5063.2	chr17	+	2198	5	full-splice_match	GOSR2	ENST00000640621.1	3059	5	-15	876	3	19	multi-exon	FALSE	canonical	1	434971	junction_2	44784.829554074444	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	71	658	35.0	-37	False	AATACA	-27
PB.5063.5	chr17	+	3070	6	full-splice_match	GOSR2	ENST00000640051.1	3964	6	2	892	0	-15	multi-exon	FALSE	canonical	1	434971	junction_2	40245.6637992219	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	64	702	30.0	-30	True	TTTAAA	-21
PB.5063.4	chr17	+	3821	5	full-splice_match	GOSR2	ENST00000640608.1	3871	5	54	-4	1	0	multi-exon	FALSE	canonical	1	42989	junction_4	200476.86997179376	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	65	562	45.0	-31	True	AATAAA	-20
PB.5063.7	chr17	+	3159	5	full-splice_match	GOSR2	ENST00000640608.1	3871	5	57	655	2	4	multi-exon	FALSE	canonical	1	42989	junction_4	200476.86997179376	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	62	559	50.0	-28	True	AATAAA	-22
PB.5063.6	chr17	+	1806	6	full-splice_match	GOSR2	ENST00000640051.1	3964	6	2	2156	0	58	multi-exon	FALSE	canonical	1	434971	junction_2	40245.6637992219	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	64	702	30.0	-30	True	TATAAA	-22
PB.9188.1	chr5	-	3834	3	full-splice_match	GDNF	ENST00000326524.6	3810	3	-931	907	-925	-907	multi-exon	FALSE	canonical	1	4350	junction_1	965.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	1132	1767	100.0	-1	True	NA	NA
PB.9188.3	chr5	-	2598	1	genic	GDNF	novel	NA	NA	NA	NA	-925	-21988	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	3	335	95.0	-1	True	AATAGA	-36
PB.9188.2	chr5	-	3053	3	full-splice_match	GDNF	ENST00000515058.5	764	3	-222	-2067	-222	-907	multi-exon	FALSE	canonical	1	2900	junction_1	1690.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	429	986	100.0	-1	True	NA	NA
PB.1096.3	chr1	+	3788	16	novel_not_in_catalog	TRAF3IP3	novel	1854	14	NA	NA	-28	0	intron_retention	FALSE	canonical	1	2540	junction_1	122895.25829131444	NA	2	NA	TRUE	NA	NA	NA	C	coding	483	1452	359	1810	25.0	0	True	AATAAA	-13
PB.6701.6	chr2	+	2180	5	novel_in_catalog	PAX8-AS1	novel	1207	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1007	junction_2	35275.64584809185	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	177	620	25.0	1	True	AATACA	-17
PB.1096.2	chr1	+	2243	17	full-splice_match	TRAF3IP3	ENST00000367025.7	2243	17	4	-4	4	-1	multi-exon	FALSE	canonical	1	122882	junction_14	107164.98732649344	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	417	2072	25.0	0	True	AATAAA	-25
PB.6920.1	chr2	-	3546	28	novel_in_catalog	ANKRD44	novel	2798	22	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	4509	junction_1	44713.0937153699	NA	1	NA	TRUE	NA	NA	NA	C	coding	976	2931	192	3122	40.0	30	False	ATTAAA	-21
PB.479.10	chr1	+	3744	9	novel_in_catalog	ACADM	novel	2535	11	NA	NA	12	4	intron_retention	FALSE	canonical	1	77016	junction_1	305425.05799804535	NA	2	NA	TRUE	NA	NA	NA	C	coding	291	876	2137	3012	15.0	-34	True	AATAAA	-20
PB.9769.1	chr6	-	3152	11	full-splice_match	DEK	ENST00000397239.7	3427	11	284	-9	2	9	multi-exon	FALSE	canonical	1	691145	junction_10	442944.1591673718	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	165	1292	40.0	-16	True	ATTAAA	-24
PB.1125.2	chr1	+	1359	5	full-splice_match	RRP15	ENST00000366932.3	7771	5	11	6401	11	-6401	multi-exon	FALSE	canonical	1	355146	junction_1	21613.016186721834	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	20	868	15.0	5	True	AATAAA	-21
PB.1027.5	chr1	-	1922	7	novel_in_catalog	DDX59	novel	2900	8	NA	NA	31	-2	no_combination_of_known_junctions	FALSE	canonical	1	20051	junction_3	79531.20419404925	NA	2	NA	TRUE	NA	NA	NA	C	coding	535	1608	184	1791	20.0	-50	True	TTTAAA	-42
PB.1125.1	chr1	+	1233	5	full-splice_match	RRP15	ENST00000366932.3	7771	5	4	6534	4	-6534	multi-exon	FALSE	canonical	1	355146	junction_1	21613.016186721834	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	27	875	25.0	-2	True	ATTAAA	-13
PB.11264.2	chr8	+	1765	4	full-splice_match	OSR2	ENST00000435298.6	1736	4	-31	2	-15	-2	multi-exon	FALSE	canonical	1	80910	junction_1	27405.885730380374	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	512	1342	25.0	-4533	False	AATAAA	-22
PB.11583.1	chr9	-	1860	1	intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.11824.5	chr9	+	3306	16	full-splice_match	GLE1	ENST00000309971.8	3321	16	18	-3	-13	3	multi-exon	FALSE	canonical	1	173513	junction_1	72400.70823306144	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	89	2185	25.0	-1	True	AATAAA	-22
PB.6230.2	chr19	-	2885	5	full-splice_match	ZNF582	ENST00000301310.8	2824	5	-61	0	-36	0	multi-exon	FALSE	canonical	1	6193	junction_4	12091.308169507549	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	221	1774	20.0	16	True	NA	NA
PB.10970.3	chr8	+	2750	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	276	659	-33	122	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	37	1131	20.0	-9	True	AATAAA	-20
PB.6230.1	chr19	-	3088	5	full-splice_match	ZNF582	ENST00000586929.5	2053	5	-13	-1022	-13	4	multi-exon	FALSE	canonical	1	22163	junction_4	6016.010679844244	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	327	1973	30.0	39	False	NA	NA
PB.10970.2	chr8	+	3765	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	250	-330	-59	330	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	63	1157	30.0	-9918	False	AATAAA	-30
PB.766.10	chr1	+	3100	23	incomplete-splice_match	INTS3	ENST00000435409.6	3597	31	24297	-544	311	0	5prime_fragment	FALSE	canonical	1	369917	junction_13	114009.61346927383	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	87	2291	5.0	9225	False	AATAAA	-16
PB.10970.5	chr8	+	3148	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	258	279	-51	-279	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	55	1149	60.0	-9910	False	TATAAA	-13
PB.11020.13	chr8	+	3174	14	novel_not_in_catalog	PPP3CC	novel	1598	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	29378	junction_8	83693.92290727844	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	289	1269	30.0	-149	False	AATAAA	-38
PB.11584.15	chr9	+	1786	16	full-splice_match	CBWD5	ENST00000497250.5	1411	16	19	-394	9	23	multi-exon	FALSE	canonical	0	0	junction_1	1104.8853253719244	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	63	605	25.0	NA	False	AATAAA	-39
PB.8147.4	chr3	+	5008	23	novel_not_in_catalog	RAD54L2	novel	4782	22	NA	NA	-2451	0	any annotated donor/acceptor	FALSE	canonical	1	7600	junction_1	31616.28722161652	NA	1	NA	TRUE	NA	NA	NA	B	coding	1467	4404	431	4834	100.0	-26	True	NA	NA
PB.11996.3	chrX	-	3181	13	incomplete-splice_match	MAP7D2	ENST00000379651.7	3930	16	60071	394	-30884	-240	5prime_fragment	FALSE	canonical	1	11697	junction_11	26455.478510550933	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	52	1863	15.0	-13	True	AATAAA	-17
PB.11996.1	chrX	-	3944	17	full-splice_match	MAP7D2	ENST00000379643.9	3918	17	-26	0	-26	0	multi-exon	FALSE	canonical	1	28437	junction_11	25494.235279458277	NA	2	NA	TRUE	NA	NA	NA	C	coding	773	2322	65	2386	15.0	28	False	AATACA	-17
PB.10970.7	chr8	+	3374	8	full-splice_match	AGPAT5	ENST00000285518.10	3685	8	309	2	0	-2	multi-exon	FALSE	canonical	1	186997	junction_1	107001.506680218	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	4	1098	20.0	24	True	AATAAA	-18
PB.11996.5	chrX	-	1401	8	novel_in_catalog	MAP7D2	novel	3930	16	NA	NA	-31009	-2	combination_of_known_junctions	FALSE	canonical	1	18770	junction_1	33785.87848163061	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	177	1208	40.0	-1	True	AATAAA	-14
PB.4815.1	chr17	-	2701	12	incomplete-splice_match	CCDC144B	ENST00000285176.13	4310	18	-172	38344	-2	7780	3prime_fragment	FALSE	canonical	1	184	junction_11	22917.894724320584	NA	2	NA	TRUE	NA	NA	NA	B	coding	725	2178	173	2350	60.0	-13	True	AATAAA	-15
PB.388.4	chr1	+	3351	6	novel_in_catalog	NSUN4	novel	2150	6	NA	NA	-45	-1011	combination_of_known_junctions	FALSE	canonical	1	7891	junction_2	97348.34377348183	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	301	1056	95.0	26	True	NA	NA
PB.4815.3	chr17	-	2565	11	incomplete-splice_match	CCDC144B	ENST00000285176.13	4310	18	-168	40523	2	5601	3prime_fragment	FALSE	canonical	1	184	junction_10	20936.955465396586	NA	0	NA	TRUE	NA	NA	NA	B	coding	725	2178	169	2346	55.0	-9	True	AGTAAA	-23
PB.4815.2	chr17	-	2773	13	novel_not_in_catalog	CCDC144B	novel	8688	17	NA	NA	0	7783	any annotated donor/acceptor	FALSE	canonical	1	184	junction_12	23035.405887670448	NA	1	NA	TRUE	NA	NA	NA	B	coding	675	2028	162	2189	50.0	-2	True	AATAAA	-18
PB.4815.5	chr17	-	2326	9	novel_in_catalog	CCDC144B	novel	8688	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	184	junction_8	20661.67360681063	NA	3	1	TRUE	NA	NA	NA	B	coding	631	1896	172	2067	80.0	-12	True	NA	NA
PB.4815.4	chr17	-	2265	9	incomplete-splice_match	CCDC144B	ENST00000285176.13	4310	18	-160	45511	1	613	3prime_fragment	FALSE	canonical	1	184	junction_8	20171.43859984954	NA	1	NA	TRUE	NA	NA	NA	B	coding	701	2103	161	2263	25.0	-1	True	NA	NA
PB.388.3	chr1	+	3406	6	full-splice_match	NSUN4	ENST00000474844.5	2150	6	561	-1817	-51	-1144	multi-exon	FALSE	canonical	1	154333	junction_1	52105.98721298733	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	90	1244	55.0	20	True	NA	NA
PB.388.2	chr1	+	3746	6	full-splice_match	NSUN4	ENST00000474844.5	2150	6	545	-2141	-67	-820	multi-exon	FALSE	canonical	1	154333	junction_1	52105.98721298733	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	106	1260	100.0	4	True	NA	NA
PB.11887.5	chr9	-	4515	28	novel_not_in_catalog	VAV2	novel	4691	27	NA	NA	-66	-325	any annotated donor/acceptor	FALSE	canonical	1	4120	junction_13	92705.86650484568	NA	1	NA	TRUE	NA	NA	NA	C	coding	857	2574	99	2672	10.0	0	True	NA	NA
PB.10970.9	chr8	+	1926	1	novel_in_catalog	AGPAT5	novel	3685	8	NA	NA	-24	-20176	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	134	405	28	432	20.0	0	True	AATAAA	-12
PB.1201.8	chr1	+	2511	6	full-splice_match	TSNAX	ENST00000366639.8	2650	6	136	3	122	-3	multi-exon	FALSE	canonical	1	414050	junction_5	51738.732758350394	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	23	895	15.0	-6268	False	AATAAA	-18
PB.11887.6	chr9	-	4422	27	full-splice_match	VAV2	ENST00000406606.7	4691	27	-150	419	-121	-419	multi-exon	FALSE	canonical	1	65227	junction_9	72662.60050162177	NA	3	NA	TRUE	NA	NA	NA	C	coding	839	2520	154	2673	45.0	410	False	NA	NA
PB.11887.2	chr9	-	4781	27	full-splice_match	VAV2	ENST00000406606.7	4691	27	-91	1	-62	-1	multi-exon	FALSE	canonical	1	65227	junction_9	72662.60050162177	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	95	2614	15.0	4	True	AATAAA	-18
PB.8196.4	chr3	+	7993	46	full-splice_match	FLNB	ENST00000295956.8	9463	46	1	1469	1	5	multi-exon	FALSE	canonical	1	241381	junction_1	267844.8339028447	NA	0	NA	TRUE	NA	NA	NA	C	coding	2602	7809	165	7973	15.0	-21	False	AAAACA	-17
PB.8277.11	chr3	+	5263	9	novel_in_catalog	NFKBIZ	novel	1338	4	NA	NA	1	-3	intron_retention	FALSE	canonical	1	108609	junction_1	115349.72167980889	NA	5	NA	TRUE	NA	NA	NA	C	coding	252	759	2857	3615	25.0	1	True	AATAAA	-12
PB.8277.10	chr3	+	2424	12	full-splice_match	NFKBIZ	ENST00000326172.9	3923	12	0	1499	0	0	multi-exon	FALSE	canonical	1	108609	junction_1	100738.41896181229	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	116	2272	80.0	0	True	NA	NA
PB.8257.43	chr3	+	3601	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	7	406	combination_of_known_junctions	FALSE	canonical	1	8037	junction_1	51069.108883676825	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	47	1111	85.0	7	True	AATACA	-41
PB.1155.3	chr1	-	3671	13	novel_in_catalog	LBR	novel	3745	14	NA	NA	-51	1	no_combination_of_known_junctions	FALSE	canonical	1	54846	junction_4	212072.90908788893	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	148	1869	5.0	734	False	AATAAA	-22
PB.69.2	chr1	-	2244	12	full-splice_match	SLC2A5	ENST00000377424.8	4165	12	81	1840	-31	1484	multi-exon	FALSE	canonical	1	112905	junction_7	47437.57310367956	NA	1	1	TRUE	NA	NA	NA	C	coding	501	1506	100	1605	20.0	-1	True	AATAAA	-21
PB.11440.7	chr9	+	3396	8	novel_in_catalog	CD274	novel	3343	6	NA	NA	19	-56	combination_of_known_junctions	FALSE	canonical	1	1793	junction_6	41066.679506303764	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	68	604	25.0	2	True	AATAAA	-28
PB.644.13	chr1	+	4570	22	novel_not_in_catalog	TTF2	novel	9462	23	NA	NA	27	288	intron_retention	FALSE	canonical	1	7182	junction_20	72035.97932149778	NA	7	2	TRUE	NA	NA	NA	C	coding	1073	3222	18	3239	30.0	3	True	NA	NA
PB.9813.1	chr6	-	2614	1	full-splice_match	HIST1H2AK	ENST00000618958.1	393	1	-46	-2175	-46	2175	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	130	393	47	439	50.0	-11	False	AATAAA	-21
PB.8148.1	chr3	+	4177	1	incomplete-splice_match	RAD54L2	ENST00000409535.6	9776	22	122902	9	34160	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-7401	False	AATAAA	-11
PB.8271.11	chr3	+	2440	5	full-splice_match	PCNP	ENST00000498274.5	786	5	10	-1664	2	-2	multi-exon	FALSE	canonical	1	61617	junction_1	134326.9105763994	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	16	True	AATAAA	-13
PB.8271.10	chr3	+	822	5	full-splice_match	PCNP	ENST00000265260.7	2342	5	101	1419	2	143	multi-exon	FALSE	canonical	1	221699	junction_2	233417.51706906554	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	21	557	35.0	16	True	AATAAA	-16
PB.8271.13	chr3	+	2186	5	full-splice_match	PCNP	ENST00000460231.5	2165	5	7	-28	3	-2	multi-exon	FALSE	canonical	1	221699	junction_2	87914.55933319578	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	17	True	AATAAA	-13
PB.8271.12	chr3	+	2364	6	novel_not_in_catalog	PCNP	novel	2342	5	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	5712	junction_2	157774.32363423397	NA	5	NA	TRUE	NA	NA	NA	C	coding	158	477	207	683	20.0	16	True	AATAAA	-12
PB.8271.15	chr3	+	2263	5	novel_not_in_catalog	PCNP	novel	2342	5	NA	NA	5	-5	any annotated donor/acceptor	FALSE	canonical	1	247	junction_3	309958.5231521913	NA	12	2	TRUE	NA	NA	NA	C	coding	127	384	18	401	20.0	19	True	AATAAA	-10
PB.8271.14	chr3	+	6204	1	novel_in_catalog	PCNP	novel	2342	5	NA	NA	4	-12370	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	41	126	344	469	75.0	18	True	NA	NA
PB.8271.17	chr3	+	2380	4	novel_in_catalog	PCNP	novel	2342	5	NA	NA	6	-2	no_combination_of_known_junctions	FALSE	canonical	1	14431	junction_3	88702.24170034638	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	20	True	AATAAA	-13
PB.8271.16	chr3	+	2128	4	novel_in_catalog	PCNP	novel	2342	5	NA	NA	5	-2	no_combination_of_known_junctions	FALSE	canonical	1	14431	junction_3	179609.72502252395	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	19	True	AATAAA	-13
PB.8271.19	chr3	+	2019	4	full-splice_match	PCNP	ENST00000469941.5	2028	4	7	2	7	-2	multi-exon	FALSE	canonical	1	122010	junction_1	124877.85312678768	NA	0	NA	TRUE	NA	NA	NA	C	coding	55	168	170	337	25.0	21	True	AATAAA	-13
PB.8271.18	chr3	+	1254	5	full-splice_match	PCNP	ENST00000265260.7	2342	5	106	982	7	204	multi-exon	FALSE	canonical	1	221699	junction_2	233417.51706906554	NA	2	NA	TRUE	NA	NA	NA	C	coding	178	537	16	552	10.0	21	True	AGTAAA	-12
PB.3599.7	chr14	-	6477	21	novel_in_catalog	SEL1L	novel	7925	21	NA	NA	1	-1372	combination_of_known_junctions	FALSE	canonical	1	24599	junction_18	114880.07121955487	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	105	2426	30.0	-4	True	AATAAA	-17
PB.3599.6	chr14	-	6542	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	9	1374	-3	-1374	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	28	2	TRUE	NA	NA	NA	C	coding	794	2385	109	2493	25.0	-8	True	AATAAA	-15
PB.3599.1	chr14	-	6530	20	novel_in_catalog	SEL1L	novel	7925	21	NA	NA	-18	-1344	no_combination_of_known_junctions	FALSE	canonical	1	13233	junction_9	119821.07910602777	NA	2	NA	TRUE	NA	NA	NA	C	coding	771	2316	136	2451	35.0	-35	True	AATAAA	-45
PB.6512.3	chr2	+	3597	2	incomplete-splice_match	ACTR2	ENST00000476840.5	587	4	-2	3461	-2	-3442	intron_retention	FALSE	canonical	1	1074268	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-342	False	NA	NA
PB.3599.2	chr14	-	3904	5	novel_not_in_catalog	SEL1L	novel	7925	21	NA	NA	-2	-1344	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	176436.9129221547	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	108	626	35.0	-7	True	AATAAA	-45
PB.2354.1	chr11	+	1947	13	full-splice_match	CHEK1	ENST00000438015.5	4153	13	805	1401	-33	31	multi-exon	FALSE	canonical	1	242500	junction_1	40025.45636867659	NA	2	NA	TRUE	NA	NA	NA	C	coding	476	1431	93	1523	30.0	0	True	AATAAA	-16
PB.6403.3	chr2	+	2643	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	-20	9326	-20	-94	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	267	1001	25.0	-20	True	NA	NA
PB.2354.3	chr11	+	2470	14	novel_in_catalog	CHEK1	novel	4051	12	NA	NA	-21	-8	combination_of_known_junctions	FALSE	canonical	1	60800	junction_13	81877.68258377822	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	81	1511	40.0	-787	False	AATAAA	-15
PB.2354.2	chr11	+	2863	14	novel_in_catalog	CHEK1	novel	4051	12	NA	NA	-32	-2	intron_retention	FALSE	canonical	1	14446	junction_13	92963.68721713827	NA	2	NA	TRUE	NA	NA	NA	C	coding	476	1431	92	1522	15.0	1	True	AATAAA	-14
PB.2354.5	chr11	+	1687	12	full-splice_match	CHEK1	ENST00000544373.5	1653	12	-1	-33	-1	30	multi-exon	FALSE	canonical	1	36044	junction_2	94893.40860936619	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	116	1264	25.0	0	True	AATAAA	-15
PB.2354.4	chr11	+	3089	12	full-splice_match	CHEK1	ENST00000544373.5	1653	12	-1	-1435	-1	0	multi-exon	FALSE	canonical	1	36044	junction_2	94893.40860936619	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	116	1264	45.0	0	True	AATAAA	-23
PB.2354.7	chr11	+	2610	13	novel_in_catalog	CHEK1	novel	4051	12	NA	NA	0	4	intron_retention	FALSE	canonical	1	14446	junction_12	121518.71412495828	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	115	1263	5.0	1	True	AATAAA	-20
PB.2354.6	chr11	+	3311	13	full-splice_match	CHEK1	ENST00000438015.5	4153	13	841	1	0	-1	multi-exon	FALSE	canonical	1	242500	junction_1	40025.45636867659	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	57	1487	45.0	1	True	AATAAA	-22
PB.3807.20	chr15	+	1950	3	full-splice_match	SNAP23	ENST00000563333.1	862	3	315	-1403	315	-5	multi-exon	FALSE	canonical	1	845575	junction_2	88238.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	60	183	192	374	25.0	NA	False	ATTAAA	-10
PB.2354.8	chr11	+	1840	14	full-splice_match	CHEK1	ENST00000428830.6	1845	14	3	2	0	-2	multi-exon	FALSE	canonical	1	17196	junction_13	92297.0287536146	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	57	1487	15.0	1	True	AATAAA	-14
PB.6403.8	chr2	+	3286	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	-3	8666	-3	566	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	250	984	100.0	-3	True	NA	NA
PB.7972.3	chr3	+	2747	3	novel_not_in_catalog	KAT2B	novel	4833	18	NA	NA	-70	-20229	any annotated donor/acceptor	FALSE	canonical	1	8742	junction_2	66362.0	NA	7	NA	TRUE	NA	NA	NA	C	coding	114	345	1044	1388	15.0	-20	True	NA	NA
PB.3733.22	chr15	-	3226	12	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	11355	junction_10	146690.0403982819	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	670	3225	80.0	40	False	NA	NA
PB.3733.23	chr15	-	3203	12	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	164	junction_10	181061.38098761011	NA	25	1	TRUE	NA	NA	NA	C	coding	820	2460	743	3202	80.0	-10	True	NA	NA
PB.3733.20	chr15	-	2701	11	full-splice_match	UBE3A	ENST00000649550.1	5025	11	432	1892	-21	-2	multi-exon	FALSE	canonical	1	103543	junction_10	119234.17229473268	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	145	2700	80.0	501	False	NA	NA
PB.3733.21	chr15	-	3253	12	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3713	junction_11	140596.58889699663	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2616	637	3252	80.0	-37	True	NA	NA
PB.3733.26	chr15	-	3070	10	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	9424	junction_9	143654.58020156855	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2439	631	3069	80.0	-16	True	NA	NA
PB.3733.27	chr15	-	2960	10	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	14974	junction_3	153671.13984234136	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	560	2959	80.0	-20	True	NA	NA
PB.3733.24	chr15	-	3204	12	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	241	junction_10	161856.15986312157	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	648	3203	80.0	-11	True	NA	NA
PB.3733.25	chr15	-	3194	12	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	14974	junction_3	154755.8208606317	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2460	734	3193	80.0	36	False	NA	NA
PB.3733.29	chr15	-	3333	11	incomplete-splice_match	UBE3A	ENST00000648336.1	5209	13	36	16791	-2	-5	3prime_fragment	FALSE	canonical	1	94074	junction_10	113469.1916548276	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	665	3022	10.0	-1	True	ATTAAA	-17
PB.211.15	chr1	-	3762	8	full-splice_match	WASF2	ENST00000536657.1	1083	8	-115	-2564	-8	-1407	multi-exon	FALSE	canonical	1	1206	junction_1	137620.11324627796	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	225	1070	95.0	-9	True	NA	NA
PB.11228.3	chr8	-	3797	3	full-splice_match	TMEM64	ENST00000458549.6	4997	3	334	866	156	-866	multi-exon	FALSE	canonical	1	289278	junction_1	3457.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	427	987	25.0	-37	True	NA	NA
PB.11648.4	chr9	-	2841	13	novel_in_catalog	IPPK	novel	4401	13	NA	NA	124	-2	combination_of_known_junctions	FALSE	canonical	1	8784	junction_4	43732.873240720066	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	154	1128	30.0	-11	True	NA	NA
PB.10256.1	chr6	+	2060	1	antisense	novelGene_PLAGL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	162	489	2	490	85.0	-613	False	NA	NA
PB.69.1	chr1	-	3850	11	novel_in_catalog	SLC2A5	novel	4165	12	NA	NA	-40	1486	intron_retention	FALSE	canonical	1	135896	junction_5	44335.6542616662	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	2190	3209	15.0	-10	True	AATAAA	-23
PB.11648.5	chr9	-	2986	14	novel_not_in_catalog	IPPK	novel	4401	13	NA	NA	112	-7	any annotated donor/acceptor	FALSE	canonical	1	3043	junction_3	50807.165838534806	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	166	1497	35.0	-23	True	NA	NA
PB.9367.1	chr5	-	5221	13	full-splice_match	SLCO4C1	ENST00000310954.6	5334	13	107	6	107	-6	multi-exon	FALSE	canonical	1	11320	junction_7	3347.5344523577683	NA	0	NA	TRUE	NA	NA	NA	A	coding	724	2175	181	2355	30.0	-1	True	ATTAAA	-14
PB.11648.6	chr9	-	3332	9	incomplete-splice_match	IPPK	ENST00000287996.7	4401	13	134	22544	134	-20201	3prime_fragment	FALSE	canonical	1	71877	junction_6	32388.412680839654	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	144	1343	90.0	-1	True	NA	NA
PB.6248.7	chr19	-	3505	6	full-splice_match	ZNF550	ENST00000447310.5	4305	6	3	797	0	-1	multi-exon	FALSE	canonical	1	25344	junction_1	23867.633796419785	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	206	1447	25.0	2	True	NA	NA
PB.6248.6	chr19	-	3917	5	novel_in_catalog	ZNF550	novel	515	4	NA	NA	1	2	intron_retention	FALSE	canonical	1	26110	junction_1	21293.061620807373	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	208	1449	30.0	0	True	NA	NA
PB.6248.5	chr19	-	2845	5	full-splice_match	ZNF550	ENST00000457177.5	3376	5	15	516	12	284	multi-exon	FALSE	canonical	1	24404	junction_1	21999.188330197547	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	194	1435	30.0	14	True	NA	NA
PB.6248.4	chr19	-	3369	5	full-splice_match	ZNF550	ENST00000457177.5	3376	5	3	4	0	0	multi-exon	FALSE	canonical	1	24404	junction_1	21999.188330197547	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	206	1447	25.0	2	True	ATTAAA	-17
PB.6248.3	chr19	-	3653	6	novel_not_in_catalog	ZNF550	novel	515	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	281	junction_2	31076.462029001952	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	209	1450	25.0	-1	True	ATTAAA	-17
PB.6248.2	chr19	-	4309	6	full-splice_match	ZNF550	ENST00000447310.5	4305	6	-4	0	-4	0	multi-exon	FALSE	canonical	1	25344	junction_1	23867.633796419785	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	213	1454	25.0	-5	True	ATTAAA	-17
PB.6248.1	chr19	-	4716	5	novel_in_catalog	ZNF550	novel	515	4	NA	NA	-4	0	intron_retention	FALSE	canonical	1	26110	junction_1	21293.061620807373	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	213	1454	25.0	-5	True	ATTAAA	-17
PB.7802.7	chr22	+	5728	21	novel_not_in_catalog	TNRC6B	novel	15958	24	NA	NA	2	227	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	47410.287394694205	NA	6	NA	TRUE	NA	NA	NA	C	coding	1407	4224	246	4469	25.0	2	True	ATTAAA	-27
PB.7802.8	chr22	+	5636	22	novel_in_catalog	TNRC6B	novel	15958	24	NA	NA	8	-17	combination_of_known_junctions	FALSE	canonical	1	16908	junction_2	46027.84400319839	NA	3	NA	TRUE	NA	NA	NA	C	coding	1690	5073	462	5534	70.0	8	True	AATAAA	-10
PB.9402.8	chr5	-	1546	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	290	2497	-3	-24	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	17	439	85.0	-4	True	NA	NA
PB.9402.9	chr5	-	1683	5	novel_not_in_catalog	ATG12	novel	4333	4	NA	NA	0	-24	any annotated donor/acceptor	FALSE	canonical	1	95	junction_4	32194.02113261871	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.11648.1	chr9	-	4298	13	full-splice_match	IPPK	ENST00000287996.7	4401	13	106	-3	106	3	multi-exon	FALSE	canonical	1	63242	junction_4	34432.770804940395	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	172	1647	20.0	-29	True	AATAAA	-23
PB.9214.1	chr5	-	2547	11	full-splice_match	PAIP1	ENST00000436644.6	1734	11	9	-822	-5	-3	multi-exon	FALSE	canonical	1	454	junction_1	78388.54789572263	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	239	1441	35.0	-8	True	AATAAA	-22
PB.3585.4	chr14	+	4193	3	full-splice_match	CIPC	ENST00000555437.5	566	3	94	-3721	-38	0	multi-exon	TRUE	canonical	1	2169	junction_2	55018.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-144	False	AATAAA	-21
PB.3585.5	chr14	+	2651	4	full-splice_match	CIPC	ENST00000361786.6	4486	4	126	1709	-35	-1709	multi-exon	FALSE	canonical	1	112206	junction_1	60721.15551345255	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	192	1391	55.0	-141	False	ATTAAA	-17
PB.3585.2	chr14	+	4470	5	full-splice_match	CIPC	ENST00000554658.5	584	5	-121	-3765	65	0	multi-exon	FALSE	canonical	1	3075	junction_1	101791.16640547695	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	302	1501	10.0	-173	False	AATAAA	-21
PB.3585.3	chr14	+	4402	4	full-splice_match	CIPC	ENST00000555611.5	599	4	-62	-3741	-38	-1	multi-exon	FALSE	canonical	1	1569	junction_3	57118.2542975536	NA	2	NA	TRUE	NA	NA	NA	C	coding	103	312	195	506	10.0	-144	False	AATAAA	-20
PB.5929.8	chr19	+	2386	4	novel_not_in_catalog	LINC01531	novel	728	4	NA	NA	-158	-1	intron_retention	FALSE	canonical	1	35	junction_1	436.0445950690008	NA	0	NA	TRUE	NA	NA	NA	B	coding	57	174	165	338	25.0	-580	False	NA	NA
PB.3585.1	chr14	+	4271	4	full-splice_match	CIPC	ENST00000361786.6	4486	4	214	1	-1	-1	multi-exon	FALSE	canonical	1	112206	junction_1	60721.15551345255	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	104	1303	10.0	0	True	AATAAA	-20
PB.5929.6	chr19	+	3974	3	novel_in_catalog	LINC01531	novel	728	4	NA	NA	-14	-751	intron_retention	FALSE	canonical	1	4170	junction_1	1822.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	299	900	1325	2224	20.0	-9750	False	NA	NA
PB.5929.7	chr19	+	2596	7	novel_not_in_catalog	LINC01531	novel	728	4	NA	NA	2	-1	intron_retention	FALSE	canonical	1	266	junction_2	2590.749998659762	NA	4	1	TRUE	NA	NA	NA	B	coding	299	900	660	1559	25.0	-9734	False	NA	NA
PB.5929.4	chr19	+	2814	7	novel_not_in_catalog	LINC01531	novel	728	4	NA	NA	-56	-2	intron_retention	FALSE	canonical	1	1073	junction_6	2379.1003726899235	NA	0	NA	TRUE	NA	NA	NA	B	coding	299	900	879	1778	25.0	-9792	False	NA	NA
PB.2366.1	chr11	+	2408	2	intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2696	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	126	381	135	515	10.0	-43	False	AAAAAG	-17
PB.5929.2	chr19	+	3545	5	novel_not_in_catalog	LINC01531	novel	728	4	NA	NA	-77	-755	intron_retention	FALSE	canonical	1	1473	junction_2	2510.4823615193955	NA	0	NA	TRUE	NA	NA	NA	B	coding	299	900	900	1799	25.0	-9813	False	NA	NA
PB.5929.3	chr19	+	1945	8	novel_not_in_catalog	LINC01531	novel	728	4	NA	NA	-77	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	2640.4067868417546	NA	3	2	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-9813	False	NA	NA
PB.7627.13	chr22	+	2897	16	novel_in_catalog	MED15	novel	590	6	NA	NA	-2	1	intron_retention	FALSE	canonical	1	5332	junction_6	247094.83455533607	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	88	1983	15.0	-24	True	AATAAA	-17
PB.5929.1	chr19	+	3321	5	novel_in_catalog	LINC01531	novel	728	4	NA	NA	-78	-5	intron_retention	FALSE	canonical	1	1073	junction_4	2405.8009451116277	NA	2	NA	TRUE	NA	NA	NA	B	coding	299	900	1389	2288	35.0	-9814	False	NA	NA
PB.9377.1	chr5	-	2808	2	novel_not_in_catalog	EFNA5	novel	5335	5	NA	NA	-520	-219681	any annotated donor/acceptor	FALSE	canonical	1	88	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	65	True	AATAAA	-21
PB.11507.16	chr9	-	3849	27	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	8940	junction_17	88369.2769905935	NA	4	1	TRUE	NA	NA	NA	C	coding	1032	3099	106	3204	75.0	1	True	NA	NA
PB.8777.7	chr4	-	3291	9	full-splice_match	USP46	ENST00000441222.7	7954	9	-56	4719	-56	1123	multi-exon	FALSE	canonical	1	122858	junction_1	23557.453926185975	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	242	1342	30.0	-99	False	ATTAAA	-17
PB.6905.11	chr2	+	2855	6	novel_in_catalog	MFSD6	novel	4797	8	NA	NA	3	-38	combination_of_known_junctions	FALSE	canonical	1	4026	junction_1	92829.68429031738	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	237	998	45.0	3	True	AATAAA	-17
PB.9059.21	chr4	-	1926	14	incomplete-splice_match	DDX60L	ENST00000505890.5	4568	30	-4	37197	0	-11514	3prime_fragment	FALSE	canonical	1	33876	junction_13	44145.545997798996	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1701	226	1926	65.0	-5	True	NA	NA
PB.9059.20	chr4	-	2132	15	novel_not_in_catalog	DDX60L	novel	6754	38	NA	NA	-11	-11487	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_14	54858.703059332714	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1728	405	2132	60.0	782	False	AAAAAG	-22
PB.9059.23	chr4	-	3488	4	incomplete-splice_match	DDX60L	ENST00000505890.5	4568	30	-4	78646	0	0	3prime_fragment	FALSE	canonical	1	33876	junction_3	49718.3040829923	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-5	True	NA	NA
PB.9059.22	chr4	-	2583	5	full-splice_match	DDX60L	ENST00000513901.1	623	5	0	-1960	0	4	multi-exon	TRUE	canonical	1	20833	junction_1	55854.638430371204	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-5	True	NA	NA
PB.9059.25	chr4	-	2568	5	novel_in_catalog	DDX60L	novel	6754	38	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	15314	junction_4	60292.75789999575	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	NA	NA
PB.9059.24	chr4	-	2745	6	novel_not_in_catalog	DDX60L	novel	6754	38	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	117	junction_5	62723.79711401407	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-6	True	NA	NA
PB.9059.26	chr4	-	2722	6	full-splice_match	DDX60L	ENST00000515088.5	2652	6	-71	1	4	-1	multi-exon	FALSE	canonical	1	4429	junction_5	60670.63798774494	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	774	False	NA	NA
PB.11495.29	chr9	-	2043	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-79	2134	-79	-1852	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1644	398	2041	55.0	-47	False	NA	NA
PB.11495.28	chr9	-	2273	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	97	1728	97	-1446	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2052	222	2273	65.0	129	False	NA	NA
PB.3894.1	chr15	+	2809	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	82	1308	-1	-1305	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	133	1239	30.0	-3	True	ATTAAA	-13
PB.10224.8	chr6	-	2703	17	full-splice_match	HBS1L	ENST00000367826.6	2703	17	0	0	0	0	multi-exon	FALSE	canonical	1	10122	junction_15	140378.17967980224	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	129	2057	30.0	-1	True	AATAAA	-19
PB.3894.3	chr15	+	1527	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	30	2642	30	33	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	185	1291	20.0	-5	True	ATTAAA	-19
PB.3894.2	chr15	+	4286	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	29	-116	29	116	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	186	1292	20.0	-6	True	NA	NA
PB.3894.5	chr15	+	5081	1	novel_in_catalog	GCOM1	novel	1846	14	NA	NA	16301	-2944	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	157	474	64	537	80.0	1	True	NA	NA
PB.3894.4	chr15	+	5918	3	incomplete-splice_match	GCOM1	ENST00000484300.1	955	5	25967	-2809	16301	2809	5prime_fragment	FALSE	canonical	1	18215	junction_2	13915.5	NA	4	NA	TRUE	NA	NA	NA	B	coding	132	399	2645	3043	10.0	1	True	NA	NA
PB.3894.7	chr15	+	4313	4	novel_in_catalog	GCOM1	novel	1846	14	NA	NA	16334	2809	no_combination_of_known_junctions	FALSE	canonical	1	8392	junction_1	15947.4122108329	NA	1	NA	TRUE	NA	NA	NA	B	coding	132	399	1040	1438	10.0	-16	True	NA	NA
PB.3894.6	chr15	+	3947	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	250	2	151	1	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	43	1071	5.0	-191	False	NA	NA
PB.3894.9	chr15	+	3738	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	81	380	-2	-377	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	134	1240	10.0	-4	True	NA	NA
PB.3894.8	chr15	+	2686	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	70	1443	4	1232	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	145	1251	10.0	-15	True	NA	NA
PB.10224.2	chr6	-	2887	18	full-splice_match	HBS1L	ENST00000367837.9	7163	18	21	4255	7	0	multi-exon	FALSE	canonical	1	307314	junction_15	91043.00295143622	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	187	2241	30.0	-22	False	AATAAA	-19
PB.10224.5	chr6	-	2982	19	novel_not_in_catalog	HBS1L	novel	7163	18	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	10291	junction_15	176311.27994674613	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	774	2336	30.0	-8	True	AATAAA	-19
PB.10224.4	chr6	-	3078	19	novel_in_catalog	HBS1L	novel	7163	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7741	junction_14	174282.28599259752	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	870	2432	30.0	3	True	AATAAA	-19
PB.10224.7	chr6	-	2886	18	novel_not_in_catalog	HBS1L	novel	7163	18	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	10291	junction_14	205174.3065610548	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	779	2095	30.0	24	False	AATAAA	-19
PB.10224.6	chr6	-	2929	19	novel_not_in_catalog	HBS1L	novel	7163	18	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	179091.55647421803	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	721	2283	30.0	-1	True	AATAAA	-19
PB.11822.2	chr9	+	2289	13	novel_not_in_catalog	CERCAM	novel	551	3	NA	NA	353	0	intron_retention	TRUE	canonical	1	10699	junction_9	188651.88531899097	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	45	1793	45.0	-25	True	AATAAA	-16
PB.6476.15	chr2	-	4329	16	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-33	1	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_3	111774.33034674026	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	363	2795	15.0	-1	True	ATTAAA	-21
PB.11822.1	chr9	+	2304	13	full-splice_match	CERCAM	ENST00000372838.8	2685	13	377	4	376	-1	multi-exon	FALSE	canonical	1	256564	junction_1	119844.53415629306	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	22	1809	45.0	-2	True	AATAAA	-15
PB.9555.2	chr5	+	2051	1	incomplete-splice_match	PPARGC1B	ENST00000309241.9	10568	12	122660	1	7328	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	126	381	794	1174	10.0	NA	False	AATAAA	-45
PB.8273.12	chr3	-	1676	3	incomplete-splice_match	ZBTB11	ENST00000312938.4	6020	11	380	21544	3	180	3prime_fragment	FALSE	canonical	1	150930	junction_2	12382.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	202	1104	20.0	-5	True	AATAAA	-14
PB.8273.11	chr3	-	2908	2	full-splice_match	ZBTB11	ENST00000461821.1	2115	2	-26	-767	-26	767	multi-exon	FALSE	canonical	1	150930	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	231	878	80.0	-13	True	NA	NA
PB.8273.10	chr3	-	5116	11	novel_not_in_catalog	ZBTB11	novel	6020	11	NA	NA	853	-561	any annotated donor/acceptor	FALSE	canonical	1	763	junction_10	74093.11134113617	NA	0	NA	TRUE	NA	NA	NA	C	coding	988	2967	434	3400	40.0	8509	False	AATAAA	-19
PB.8768.2	chr4	-	3161	1	novel_in_catalog	TEC	novel	3687	18	NA	NA	31865	-52278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.9048.2	chr4	-	1869	8	full-splice_match	NAF1	ENST00000274054.2	1907	8	34	4	3	-4	multi-exon	FALSE	canonical	1	122657	junction_4	24378.661869155414	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	161	1645	35.0	-2	True	ATTAAA	-18
PB.8768.1	chr4	-	5401	18	full-splice_match	TEC	ENST00000381501.7	3687	18	39	-1753	39	1753	multi-exon	TRUE	canonical	1	16150	junction_17	22350.743319347024	NA	2	NA	TRUE	NA	NA	NA	C	coding	631	1896	120	2015	25.0	-8	True	ATTAAA	-14
PB.1022.27	chr1	+	2516	24	incomplete-splice_match	PTPRC	ENST00000348564.11	4753	30	107	9129	2	-6303	3prime_fragment	FALSE	canonical	1	214755	junction_3	304046.1450270393	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2409	107	2515	75.0	-20	True	NA	NA
PB.1022.26	chr1	+	2310	22	full-splice_match	PTPRC	ENST00000367367.8	2291	22	-23	4	-1	-4	multi-exon	FALSE	canonical	1	257769	junction_4	323366.5952816203	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2199	110	2308	25.0	-23	True	NA	NA
PB.1022.25	chr1	+	4500	33	full-splice_match	PTPRC	ENST00000442510.7	5390	33	62	828	-4	-635	multi-exon	FALSE	canonical	1	197273	junction_3	370576.94417771033	NA	0	NA	TRUE	NA	NA	NA	C	coding	1306	3921	113	4033	20.0	-26	True	AATAAA	-22
PB.1022.24	chr1	+	4866	31	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-62	-2	combination_of_known_junctions	FALSE	canonical	1	257769	junction_3	354396.87288941414	NA	18	3	TRUE	NA	NA	NA	C	coding	1240	3723	44	3766	30.0	-7655	False	AATAAA	-29
PB.1022.23	chr1	+	2815	26	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-12	-6303	combination_of_known_junctions	FALSE	canonical	1	257769	junction_4	313700.87858557235	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2694	121	2814	75.0	-34	True	NA	NA
PB.1022.22	chr1	+	2498	23	incomplete-splice_match	PTPRC	ENST00000442510.7	5390	33	75	22228	9	-4	3prime_fragment	FALSE	canonical	1	197273	junction_3	340828.2133331417	NA	3	NA	TRUE	NA	NA	NA	C	coding	799	2397	100	2496	25.0	-13	True	NA	NA
PB.1022.21	chr1	+	4376	30	full-splice_match	PTPRC	ENST00000348564.11	4753	30	90	287	12	-287	multi-exon	FALSE	canonical	1	214755	junction_3	339037.8226913115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1145	3438	124	3561	65.0	-37	True	AATAAA	-8
PB.1022.20	chr1	+	4663	32	novel_in_catalog	PTPRC	novel	731	7	NA	NA	10	-287	combination_of_known_junctions	FALSE	canonical	1	257769	junction_4	352585.275810798	NA	0	NA	TRUE	NA	NA	NA	C	coding	1240	3723	126	3848	65.0	-39	True	AATAAA	-8
PB.9226.2	chr5	+	4368	3	novel_not_in_catalog	SNX18	novel	2063	2	NA	NA	-45	-716	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	113798.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	563	1692	240	1931	15.0	-45	True	AATAAA	-19
PB.9226.3	chr5	+	4548	2	full-splice_match	SNX18	ENST00000381410.4	5218	2	-45	715	-41	-715	multi-exon	FALSE	canonical	1	227597	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	624	1875	236	2110	20.0	-41	True	AATAAA	-20
PB.9226.1	chr5	+	3285	2	full-splice_match	SNX18	ENST00000381410.4	5218	2	-41	1974	-37	1338	multi-exon	FALSE	canonical	1	227597	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	232	2106	70.0	-37	True	AAAAAG	-24
PB.8689.2	chr4	+	4788	13	novel_in_catalog	TBC1D14	novel	663	2	NA	NA	22	-1	no_combination_of_known_junctions	FALSE	canonical	1	22036	junction_1	165937.69344269956	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	58	2067	20.0	0	True	AATAAA	-19
PB.9226.4	chr5	+	5241	2	full-splice_match	SNX18	ENST00000381410.4	5218	2	-17	-6	-13	6	multi-exon	FALSE	canonical	1	227597	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	624	1875	208	2082	40.0	-13	True	AATAAA	-25
PB.9226.5	chr5	+	3900	2	full-splice_match	SNX18	ENST00000381410.4	5218	2	-7	1325	-3	-1325	multi-exon	FALSE	canonical	1	227597	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	624	1875	198	2072	45.0	-3	True	TATAAA	-9
PB.641.5	chr1	-	2117	4	full-splice_match	CD58	ENST00000369487.3	892	4	38	-1263	-17	1263	multi-exon	FALSE	canonical	1	270122	junction_3	82282.50766853319	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	30	752	85.0	-8	True	AAAACA	-18
PB.8689.3	chr4	+	2401	14	full-splice_match	TBC1D14	ENST00000409757.8	4925	14	-59	2583	-59	-2583	multi-exon	FALSE	canonical	1	66783	junction_1	123325.16806615096	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	184	2265	80.0	-40	True	NA	NA
PB.10130.1	chr6	-	2374	3	novel_not_in_catalog	BVES	novel	5567	8	NA	NA	-52	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	12139.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	59	406	30.0	-70	True	AATAAA	-13
PB.10130.2	chr6	-	5563	8	full-splice_match	BVES	ENST00000314641.9	5567	8	-2	6	-2	-6	multi-exon	FALSE	canonical	1	24279	junction_7	13937.1494816361	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	220	1302	30.0	-20	True	AATAAA	-11
PB.798.2	chr1	-	2407	9	full-splice_match	FAM189B	ENST00000350210.6	2379	9	-29	1	-21	-1	multi-exon	FALSE	canonical	1	154884	junction_8	55140.35983274298	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	116	1831	30.0	7443	False	AATAAA	-29
PB.641.7	chr1	-	1906	3	incomplete-splice_match	CD58	ENST00000369487.3	892	4	25	12942	12	-12942	3prime_fragment	FALSE	canonical	1	270122	junction_2	82321.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	43	678	30.0	-21	True	NA	NA
PB.11315.2	chr8	+	2118	9	full-splice_match	DEPTOR	ENST00000286234.5	2569	9	55	396	55	-396	multi-exon	FALSE	canonical	1	118594	junction_6	22378.391765272143	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	76	1305	30.0	-7	True	ATTAAA	-17
PB.5862.1	chr19	-	2805	1	full-splice_match	TSSK6	ENST00000585580.3	1467	1	-510	-828	-510	828	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	273	822	769	1590	100.0	-30	False	NA	NA
PB.9235.2	chr5	+	2869	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-107	0	any annotated donor/acceptor	FALSE	canonical	1	14343	junction_4	370364.90357266425	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	1097	2539	35.0	-15	True	AATAAA	-20
PB.641.6	chr1	-	5177	3	incomplete-splice_match	CD58	ENST00000369487.3	892	4	49	9647	-6	-9647	3prime_fragment	FALSE	canonical	1	270122	junction_2	82321.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	266	801	2363	3163	25.0	3	True	NA	NA
PB.9235.3	chr5	+	3019	14	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-99	-3	any annotated donor/acceptor	FALSE	canonical	1	10894	junction_2	375644.13686397934	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	1211	2692	30.0	-7	True	AATAAA	-17
PB.11004.4	chr8	-	3675	9	novel_in_catalog	CSGALNACT1	novel	4232	10	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	1	26935	junction_8	46740.561086571266	NA	1	NA	TRUE	NA	NA	NA	B	coding	530	1593	465	2057	30.0	18	True	AATAAA	-19
PB.641.1	chr1	-	1149	6	full-splice_match	CD58	ENST00000369489.9	1098	6	-51	0	-51	0	multi-exon	FALSE	canonical	1	270122	junction_5	68099.83348995796	NA	8	NA	TRUE	NA	NA	NA	C	coding	250	753	119	871	15.0	-97	False	AATAAA	-21
PB.6477.26	chr2	-	2468	28	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	5	379	any annotated donor/acceptor	FALSE	canonical	1	492	junction_11	85080.57473178797	NA	1	1	TRUE	NA	NA	NA	C	coding	241	726	1497	2222	50.0	-3	True	ATTAAA	-22
PB.7529.23	chr21	+	2909	18	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	2238	junction_14	402132.70029337174	NA	3	1	TRUE	NA	NA	NA	C	coding	465	1398	353	1750	20.0	-2	True	AATAAA	-12
PB.9235.1	chr5	+	2917	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-116	0	any annotated donor/acceptor	FALSE	canonical	1	65593	junction_1	321280.17398788786	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1106	2587	35.0	-24	True	AATAAA	-20
PB.641.3	chr1	-	5541	5	novel_in_catalog	CD58	novel	1098	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	22051	junction_1	172957.5156712986	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	69	782	15.0	-47	True	AATAAA	-20
PB.7529.22	chr21	+	2774	17	full-splice_match	MX1	ENST00000398598.7	2850	17	73	3	-1	-2	multi-exon	FALSE	canonical	1	265969	junction_1	263573.6059748064	NA	11	NA	TRUE	NA	NA	NA	C	coding	662	1989	333	2321	15.0	-1	True	AATAAA	-15
PB.641.2	chr1	-	5512	5	full-splice_match	CD58	ENST00000457047.6	1328	5	-19	-4165	-6	0	multi-exon	FALSE	canonical	1	270122	junction_4	72481.6269077033	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	74	820	15.0	-52	True	AATAAA	-21
PB.7529.21	chr21	+	2561	15	novel_in_catalog	MX1	novel	762	5	NA	NA	12	-2	no_combination_of_known_junctions	FALSE	canonical	1	5194	junction_13	354257.288399589	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	356	1639	15.0	5	True	AATAAA	-15
PB.7529.20	chr21	+	3269	18	novel_not_in_catalog	MX1	novel	762	5	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	264	junction_14	369453.5989072639	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	358	1809	10.0	3	True	AATAAA	-17
PB.8116.12	chr3	+	5733	6	novel_in_catalog	DAG1	novel	5576	3	NA	NA	3	-4	no_combination_of_known_junctions	FALSE	canonical	1	422	junction_2	199928.50948076413	NA	53	3	TRUE	NA	NA	NA	C	coding	893	2682	640	3321	20.0	-7	True	AATAAA	-16
PB.7529.27	chr21	+	2700	16	novel_in_catalog	MX1	novel	762	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	19935	junction_3	332532.0893902555	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	257	2245	10.0	-1	True	AATAAA	-17
PB.5717.12	chr19	+	2860	18	novel_not_in_catalog	SMARCA4	novel	5791	35	NA	NA	-42	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	371266.18191400554	NA	1	1	TRUE	NA	NA	NA	B	coding	481	1446	179	1624	15.0	-3911	False	AATAAA	-21
PB.7529.26	chr21	+	2910	17	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	9081	junction_1	303709.37164921744	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	467	2455	10.0	-1	True	AATAAA	-17
PB.5890.5	chr19	+	2987	4	full-splice_match	ZNF254	ENST00000357002.4	3967	4	-19	999	-2	-999	multi-exon	FALSE	canonical	1	40281	junction_1	29456.463267375162	NA	1	NA	TRUE	NA	NA	NA	C	coding	659	1980	135	2114	25.0	0	True	AATACA	-44
PB.5890.4	chr19	+	4003	4	full-splice_match	ZNF254	ENST00000357002.4	3967	4	-38	2	-5	-2	multi-exon	FALSE	canonical	1	40281	junction_1	29456.463267375162	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	154	2133	35.0	0	True	AATAAA	-17
PB.5890.3	chr19	+	4092	5	novel_in_catalog	ZNF254	novel	4244	5	NA	NA	3	-2	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	51126.384408517486	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	366	2222	35.0	-6	True	AATAAA	-17
PB.5890.2	chr19	+	1881	6	novel_not_in_catalog	ZNF254	novel	4244	5	NA	NA	51	-40666	any annotated donor/acceptor	FALSE	canonical	1	4440	junction_5	36678.13963330202	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-5	True	NA	NA
PB.5890.1	chr19	+	4204	6	novel_in_catalog	ZNF254	novel	4244	5	NA	NA	73	-2	no_combination_of_known_junctions	FALSE	canonical	1	35643	junction_3	30604.004809828402	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	478	2334	35.0	17	True	AATAAA	-17
PB.7529.24	chr21	+	4245	15	novel_not_in_catalog	MX1	novel	762	5	NA	NA	-1	994	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	386082.8508409755	NA	2	1	TRUE	NA	NA	NA	C	coding	483	1452	333	1784	20.0	-1	True	NA	NA
PB.1819.18	chr11	-	3736	22	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_21	1632292.5010067013	NA	11	2	TRUE	NA	NA	NA	C	coding	701	2106	867	2972	25.0	-1	True	AATAAA	-18
PB.1819.19	chr11	-	3745	22	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	1	intron_retention	FALSE	canonical	1	25159	junction_2	1728248.583342965	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	927	2981	25.0	-1	True	AATAAA	-18
PB.5937.1	chr19	+	3026	15	full-splice_match	KIRREL2	ENST00000360202.9	2942	15	-60	-24	-48	24	multi-exon	TRUE	canonical	1	8221	junction_8	2582.051225404377	NA	0	NA	TRUE	NA	NA	NA	A	coding	705	2118	268	2385	20.0	-6069	False	AATAAA	-16
PB.1819.14	chr11	-	4141	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	2	1	intron_retention	FALSE	canonical	1	3229390	junction_20	1113409.0458851263	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	939	2534	25.0	-13	True	AATAAA	-18
PB.1819.15	chr11	-	3808	22	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	1	1	intron_retention	FALSE	canonical	1	975	junction_3	1684178.2019588924	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	923	2665	25.0	3	True	AATAAA	-18
PB.1819.16	chr11	-	3882	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	1	intron_retention	FALSE	canonical	1	3229390	junction_20	1143179.9438791734	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	1013	3118	25.0	-1	True	AATAAA	-18
PB.1819.17	chr11	-	3879	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	1	intron_retention	FALSE	canonical	1	3229390	junction_20	1143553.7158476817	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	927	2261	25.0	-1	True	AATAAA	-18
PB.10362.1	chr7	-	3155	17	full-splice_match	MICALL2	ENST00000297508.7	3121	17	-28	-6	-28	0	multi-exon	TRUE	canonical	1	102842	junction_15	43454.26723539178	NA	1	1	TRUE	NA	NA	NA	A	coding	904	2715	205	2919	10.0	-37	False	AATAAA	-23
PB.11144.2	chr8	+	5146	10	novel_in_catalog	UBXN2B	novel	5068	8	NA	NA	-10	-1	combination_of_known_junctions	TRUE	canonical	1	16716	junction_8	55755.0010634046	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	790	1197	35.0	-19	True	AATAAA	-21
PB.9114.4	chr5	+	2626	1	novel_in_catalog	PDCD6	novel	1135	6	NA	NA	-1	904	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	17	54	477	530	15.0	0	True	NA	NA
PB.6461.2	chr2	+	1328	11	incomplete-splice_match	PPP1R21	ENST00000294952.12	3142	22	-2	43938	-2	-2	3prime_fragment	FALSE	canonical	1	159089	junction_1	39406.47932053814	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	160	1251	5.0	-3	True	AATAAA	-12
PB.8626.12	chr3	+	2992	6	full-splice_match	PIGX	ENST00000392391.7	3057	6	54	11	1	-11	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	245	898	50.0	1	True	AATAAA	-7
PB.11343.7	chr8	-	2083	13	full-splice_match	FAM49B	ENST00000517654.5	1817	13	-254	-12	-8	-2	multi-exon	FALSE	canonical	1	206065	junction_11	281317.01317832945	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	439	1413	15.0	-64	False	AATAAA	-20
PB.6716.5	chr2	-	1856	1	full-splice_match	TMEM185B	ENST00000426077.2	2131	1	271	4	271	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	350	1053	162	1214	25.0	3	True	TTTAAA	-4
PB.11144.6	chr8	+	5053	9	full-splice_match	UBXN2B	ENST00000523409.5	1225	9	-13	-3815	9	-2	multi-exon	FALSE	canonical	1	16716	junction_7	56056.25880964921	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	19	609	35.0	0	True	AATAAA	-20
PB.5464.6	chr18	+	5240	4	full-splice_match	C18orf25	ENST00000619301.4	5264	4	34	-10	-18	2	multi-exon	FALSE	canonical	1	108246	junction_1	28571.15406606227	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	340	1365	10.0	4	True	AATAAA	-24
PB.5464.7	chr18	+	2793	2	full-splice_match	C18orf25	ENST00000619230.1	3744	2	53	898	-14	-898	multi-exon	FALSE	canonical	1	108246	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	243	732	336	1067	15.0	8	True	AGTAAA	-13
PB.5464.4	chr18	+	4722	4	full-splice_match	C18orf25	ENST00000619301.4	5264	4	18	524	18	-524	multi-exon	FALSE	canonical	1	108246	junction_1	28571.15406606227	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	356	1381	15.0	10	True	TTTAAA	-22
PB.5464.5	chr18	+	5318	5	full-splice_match	C18orf25	ENST00000615052.4	5462	5	37	107	-22	-99	multi-exon	FALSE	canonical	1	5489	junction_2	55093.69487064741	NA	2	NA	TRUE	NA	NA	NA	C	coding	402	1209	344	1552	30.0	0	True	AATAAA	-15
PB.5464.2	chr18	+	3447	4	full-splice_match	C18orf25	ENST00000619301.4	5264	4	-3	1820	-3	-1820	multi-exon	FALSE	canonical	1	108246	junction_1	28571.15406606227	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	377	1402	30.0	-11	True	ATTAAA	-17
PB.5464.3	chr18	+	5172	4	full-splice_match	C18orf25	ENST00000619301.4	5264	4	-2	94	-2	-94	multi-exon	FALSE	canonical	1	108246	junction_1	28571.15406606227	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	376	1401	30.0	-10	True	AATAAA	-20
PB.5464.1	chr18	+	5162	4	novel_in_catalog	C18orf25	novel	668	2	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	12574	junction_1	68852.21464524984	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	272	1297	40.0	-1	True	AATAAA	-14
PB.3814.1	chr15	-	3419	1	novel_in_catalog	AC068724.4	novel	593	4	NA	NA	20592	-2678	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-12	True	NA	NA
PB.9663.1	chr5	+	2574	5	full-splice_match	ZNF879	ENST00000444149.6	3304	5	52	678	0	-678	multi-exon	FALSE	canonical	1	11269	junction_1	4557.332134867943	NA	2	NA	TRUE	NA	NA	NA	A	coding	563	1692	137	1828	20.0	0	True	ATTAAA	-29
PB.11144.4	chr8	+	6881	1	novel_in_catalog	UBXN2B	novel	5068	8	NA	NA	2	-16674	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-7	True	NA	NA
PB.5464.8	chr18	+	5414	5	full-splice_match	C18orf25	ENST00000615052.4	5462	5	48	0	-11	0	multi-exon	FALSE	canonical	1	5489	junction_2	55093.69487064741	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	333	1541	15.0	11	True	AATAAA	-22
PB.2680.23	chr12	-	4840	22	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_12	125687.37615367168	NA	6	NA	TRUE	NA	NA	NA	B	coding	393	1182	1871	3052	25.0	2718	False	AATAAA	-16
PB.9722.9	chr6	+	3377	8	novel_not_in_catalog	SNRNP48	novel	4173	9	NA	NA	-6	-651	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	96017.60863487064	NA	1	1	TRUE	NA	NA	NA	C	coding	137	414	39	452	80.0	-15	True	NA	NA
PB.2680.21	chr12	-	5060	22	novel_in_catalog	STAT2	novel	3278	11	NA	NA	5	-3	intron_retention	FALSE	canonical	1	366949	junction_9	73573.39859649375	NA	3	NA	TRUE	NA	NA	NA	B	coding	393	1182	2090	3271	25.0	-26	True	AATAAA	-17
PB.8710.3	chr4	+	2258	4	full-splice_match	MED28	ENST00000237380.11	10868	4	10	8600	-7	-2665	multi-exon	FALSE	canonical	1	627945	junction_2	99966.91022644554	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	15	551	40.0	-5	True	AATAAA	-26
PB.8710.2	chr4	+	2371	4	full-splice_match	MED28	ENST00000237380.11	10868	4	10	8487	-7	-2552	multi-exon	FALSE	canonical	1	627945	junction_2	99966.91022644554	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	15	551	40.0	-5	True	ATTAAA	-15
PB.2680.24	chr12	-	4472	23	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	157029.5206465048	NA	4	NA	TRUE	NA	NA	NA	B	coding	393	1182	1503	2684	25.0	2718	False	AATAAA	-16
PB.2680.25	chr12	-	3736	23	novel_not_in_catalog	STAT2	novel	3278	11	NA	NA	-1	447	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	124606.8239016691	NA	4	1	TRUE	NA	NA	NA	B	coding	393	1182	1429	2610	15.0	-2	True	NA	NA
PB.9722.3	chr6	+	1414	9	full-splice_match	SNRNP48	ENST00000342415.5	4173	9	3	2756	3	5	multi-exon	FALSE	canonical	1	98596	junction_4	67303.1966745219	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	57	1076	50.0	4	True	ATTAAA	-21
PB.9722.2	chr6	+	4155	9	full-splice_match	SNRNP48	ENST00000342415.5	4173	9	17	1	-10	-1	multi-exon	FALSE	canonical	1	98596	junction_4	67303.1966745219	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	43	1062	20.0	-19	True	ATTAAA	-21
PB.9722.1	chr6	+	3025	9	novel_in_catalog	SNRNP48	novel	4173	9	NA	NA	3	-47	intron_retention	FALSE	canonical	1	15212	junction_4	86116.94257147878	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	57	491	35.0	4	True	AATATA	-16
PB.9722.7	chr6	+	4051	9	full-splice_match	SNRNP48	ENST00000342415.5	4173	9	17	105	-10	-105	multi-exon	FALSE	canonical	1	98596	junction_4	67303.1966745219	NA	4	1	TRUE	NA	NA	NA	C	coding	339	1020	43	1062	30.0	-19	True	AATAAA	-20
PB.9722.6	chr6	+	5712	9	novel_in_catalog	SNRNP48	novel	4173	9	NA	NA	-11	-108	intron_retention	FALSE	canonical	1	15212	junction_4	86116.94257147878	NA	4	NA	TRUE	NA	NA	NA	C	coding	144	435	44	478	25.0	-20	True	AATAAA	-17
PB.9722.5	chr6	+	2634	9	full-splice_match	SNRNP48	ENST00000342415.5	4173	9	7	1532	7	1229	multi-exon	FALSE	canonical	1	98596	junction_4	67303.1966745219	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	53	1072	35.0	-29	False	TATAAA	-36
PB.9722.4	chr6	+	2627	8	novel_in_catalog	SNRNP48	novel	4173	9	NA	NA	7	715	intron_retention	FALSE	canonical	1	15212	junction_4	91755.90862518147	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	53	487	80.0	-29	False	NA	NA
PB.4928.8	chr17	-	5232	23	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	10	-7	combination_of_known_junctions	FALSE	canonical	1	32589	junction_8	65368.790642350024	NA	0	NA	TRUE	NA	NA	NA	C	coding	1370	4113	17	4129	50.0	26	True	CATAAA	-9
PB.4928.9	chr17	-	4760	22	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	1	51506	junction_15	62533.20564177671	NA	0	NA	TRUE	NA	NA	NA	C	coding	1403	4212	72	4283	20.0	-29	True	AATAAA	-19
PB.8276.1	chr3	+	3306	8	full-splice_match	NXPE3	ENST00000273347.9	3941	8	-52	687	-24	111	multi-exon	TRUE	canonical	1	26118	junction_3	55547.50044487573	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	645	2324	0.0	-6184	False	ACTAAA	-13
PB.11412.1	chr8	-	873	6	full-splice_match	RPL8	ENST00000262584.7	1041	6	169	-1	2	0	multi-exon	FALSE	canonical	1	7084006	junction_5	5804573.084619933	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	65	838	10.0	-29	True	AATAAA	-17
PB.1674.8	chr10	-	5281	22	full-splice_match	EIF3A	ENST00000369144.7	6646	22	-7	1372	-7	751	multi-exon	FALSE	canonical	1	780023	junction_21	513062.870659706	NA	1	NA	TRUE	NA	NA	NA	C	coding	1382	4149	136	4284	10.0	5	True	AATAAA	-16
PB.1256.1	chr1	-	3107	7	full-splice_match	SH3BP5L	ENST00000366472.5	3861	7	754	0	-244	0	multi-exon	FALSE	canonical	1	284079	junction_3	24799.640127877305	NA	46	1	TRUE	NA	NA	NA	C	coding	393	1182	477	1658	20.0	2	True	AATAAA	-16
PB.4928.1	chr17	-	2578	15	novel_not_in_catalog	SYNRG	novel	8229	22	NA	NA	-10	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	76679.15525840681	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	67	1920	10.0	-24	True	AATACA	-24
PB.4928.3	chr17	-	2790	16	novel_not_in_catalog	SYNRG	novel	8229	22	NA	NA	-11	-7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	83084.86429364455	NA	3	1	TRUE	NA	NA	NA	C	coding	714	2145	43	2187	20.0	0	True	AATACA	-16
PB.4928.4	chr17	-	2793	16	novel_not_in_catalog	SYNRG	novel	8229	22	NA	NA	5	-99	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78268.08872796682	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	79	2235	45.0	-36	True	AATAAA	-31
PB.4928.5	chr17	-	2837	15	novel_not_in_catalog	SYNRG	novel	8229	22	NA	NA	-6	-114	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	76679.15525840681	NA	2	1	TRUE	NA	NA	NA	C	coding	743	2232	63	2294	40.0	-20	True	AATAAA	-16
PB.4928.6	chr17	-	2465	15	novel_not_in_catalog	SYNRG	novel	8229	22	NA	NA	6	-114	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	76679.15525840681	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	78	1922	40.0	-35	True	AATAAA	-16
PB.4928.7	chr17	-	5060	21	novel_in_catalog	SYNRG	novel	8229	22	NA	NA	-11	2	combination_of_known_junctions	TRUE	canonical	1	25093	junction_19	64623.19116044952	NA	3	NA	TRUE	NA	NA	NA	C	coding	1301	3906	43	3948	25.0	0	True	CATAAA	-18
PB.10093.3	chr6	+	5562	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	16	5032	0	-1481	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	1	NA	TRUE	NA	NA	NA	C	coding	1845	5535	28	5562	65.0	-4	True	AATACA	-23
PB.11328.13	chr8	+	3706	22	incomplete-splice_match	FAM91A1	ENST00000521166.5	2706	23	15	250	14	-250	3prime_fragment	FALSE	canonical	1	11858	junction_4	107334.51762079564	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	233	2497	10.0	32	True	ATTAAA	-17
PB.11328.12	chr8	+	2889	24	full-splice_match	FAM91A1	ENST00000334705.11	5511	24	11	2611	11	-1	multi-exon	FALSE	canonical	1	11858	junction_4	105462.14276371308	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	236	2752	20.0	29	True	ATTAAA	-14
PB.8276.5	chr3	+	5709	5	incomplete-splice_match	NXPE3	ENST00000273347.9	3941	8	-18	17383	10	4940	3prime_fragment	FALSE	canonical	1	26118	junction_3	66140.9867116261	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	611	1591	50.0	1	True	AATAAA	-24
PB.11328.11	chr8	+	3121	24	full-splice_match	FAM91A1	ENST00000334705.11	5511	24	8	2382	8	228	multi-exon	FALSE	canonical	1	11858	junction_4	105462.14276371308	NA	4	NA	TRUE	NA	NA	NA	C	coding	838	2517	239	2755	25.0	26	True	CATAAA	-14
PB.483.9	chr1	-	4380	14	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	-14	2	any annotated donor/acceptor	FALSE	canonical	1	202	junction_13	121441.56039767641	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	536	3244	20.0	-36	True	AATAAA	-29
PB.838.10	chr1	-	3960	8	novel_not_in_catalog	FCRL5	novel	5390	17	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	248	junction_6	21401.338936751465	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	151	1638	10.0	-36	True	NA	NA
PB.6468.7	chr2	-	1936	7	full-splice_match	RTN4	ENST00000317610.11	2333	7	93	304	-75	92	multi-exon	FALSE	canonical	1	1030166	junction_6	1616799.530346441	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	152	1273	50.0	-1	True	NA	NA
PB.11328.16	chr8	+	5191	23	incomplete-splice_match	FAM91A1	ENST00000334705.11	5511	24	5621	4	5432	-4	5prime_fragment	FALSE	canonical	1	11858	junction_3	105290.88774595158	NA	4	1	TRUE	NA	NA	NA	C	coding	763	2292	156	2447	30.0	5639	False	AATAAA	-26
PB.152.13	chr1	-	1997	14	novel_in_catalog	USP48	novel	4309	26	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	1	2359	junction_13	145869.84866950367	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1512	485	1996	35.0	1111	False	AATAAA	-2
PB.11328.15	chr8	+	7642	23	full-splice_match	FAM91A1	ENST00000521166.5	2706	23	22	-4958	21	-15	multi-exon	FALSE	canonical	1	11858	junction_4	105857.71736109194	NA	1	NA	TRUE	NA	NA	NA	C	coding	789	2370	226	2595	40.0	39	True	AATAAA	-15
PB.11328.14	chr8	+	3617	25	novel_not_in_catalog	FAM91A1	novel	2706	23	NA	NA	15	837	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	105489.4400982537	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	126	2642	65.0	33	True	NA	NA
PB.9424.1	chr5	+	7598	25	full-splice_match	MEGF10	ENST00000503335.6	7571	25	-37	10	-37	-10	multi-exon	TRUE	canonical	1	14386	junction_5	6017.064455917575	NA	42	1	TRUE	NA	NA	NA	C	coding	1140	3423	282	3704	45.0	-2	True	AATAAA	-6
PB.11170.1	chr8	-	1221	9	novel_in_catalog	PPP1R42	novel	610	4	NA	NA	-5541	-28560	no_combination_of_known_junctions	FALSE	canonical	1	56558	junction_8	285441.6579600538	NA	0	NA	TRUE	NA	NA	NA	B	coding	334	1005	69	1073	25.0	-13	True	AATAAA	-11
PB.5236.1	chr17	+	3395	6	full-splice_match	KCTD2	ENST00000322444.6	3635	6	240	0	240	0	multi-exon	FALSE	canonical	1	225004	junction_1	48397.07220235538	NA	0	NA	TRUE	NA	NA	NA	A	coding	64	195	364	558	20.0	-6401	False	AATAAA	-22
PB.8766.1	chr4	+	6061	23	full-splice_match	ATP10D	ENST00000273859.7	6655	23	-12	606	-12	-11	multi-exon	FALSE	canonical	1	74921	junction_11	18537.14142584383	NA	1	NA	TRUE	NA	NA	NA	C	coding	1426	4281	282	4562	40.0	-52	True	AATAAA	-19
PB.8766.2	chr4	+	6007	23	novel_in_catalog	ATP10D	novel	6655	23	NA	NA	-12	-20	combination_of_known_junctions	FALSE	canonical	1	11546	junction_8	27507.756122306622	NA	2	NA	TRUE	NA	NA	NA	C	coding	1411	4236	282	4517	55.0	-52	True	AATAAA	-10
PB.8766.3	chr4	+	3214	15	incomplete-splice_match	ATP10D	ENST00000273859.7	6655	23	-12	29641	-12	16281	3prime_fragment	FALSE	canonical	1	74921	junction_11	20952.403871145474	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2919	282	3200	80.0	-52	True	NA	NA
PB.8766.4	chr4	+	1944	1	genic	ATP10D	novel	NA	NA	NA	NA	-2	-25617	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-42	True	NA	NA
PB.8766.5	chr4	+	6149	24	novel_in_catalog	ATP10D	novel	6655	23	NA	NA	-11	-15	combination_of_known_junctions	FALSE	canonical	1	5657	junction_22	33336.12972360409	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	281	4093	35.0	-51	True	AATAAA	-15
PB.8766.6	chr4	+	6160	24	novel_not_in_catalog	ATP10D	novel	6655	23	NA	NA	-11	-20	any annotated donor/acceptor	FALSE	canonical	1	5429	junction_9	34459.18845118897	NA	1	NA	TRUE	NA	NA	NA	C	coding	934	2805	1866	4670	55.0	-51	True	AATAAA	-10
PB.8766.7	chr4	+	5527	21	novel_in_catalog	ATP10D	novel	6655	23	NA	NA	-9	-20	no_combination_of_known_junctions	FALSE	canonical	1	343	junction_1	30259.47085372611	NA	1	1	TRUE	NA	NA	NA	C	coding	1234	3705	333	4037	55.0	-49	True	AATAAA	-10
PB.8766.8	chr4	+	3051	14	incomplete-splice_match	ATP10D	ENST00000273859.7	6655	23	0	32297	0	13625	3prime_fragment	FALSE	canonical	1	74921	junction_11	19687.79330376052	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	270	2945	15.0	-40	True	AATAAA	-18
PB.11621.9	chr9	-	3033	11	full-splice_match	UBQLN1	ENST00000376395.8	4118	11	227	858	-42	608	multi-exon	FALSE	canonical	1	863295	junction_9	174628.50651279703	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	298	2067	5.0	267	False	CATAAA	-15
PB.11621.8	chr9	-	3575	11	full-splice_match	UBQLN1	ENST00000376395.8	4118	11	224	319	-45	-311	multi-exon	FALSE	canonical	1	863295	junction_9	174628.50651279703	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	301	2070	40.0	264	False	AATAAA	-9
PB.4323.1	chr16	-	7417	7	full-splice_match	ZKSCAN2	ENST00000328086.11	7523	7	91	15	91	-15	multi-exon	FALSE	canonical	1	35264	junction_2	3657.6481704626663	NA	2	NA	TRUE	NA	NA	NA	C	coding	967	2904	714	3617	20.0	-8	True	AATAAA	-24
PB.4323.2	chr16	-	3764	7	full-splice_match	ZKSCAN2	ENST00000328086.11	7523	7	86	3673	86	-180	multi-exon	FALSE	canonical	1	35264	junction_2	3657.6481704626663	NA	2	NA	TRUE	NA	NA	NA	C	coding	967	2904	719	3622	20.0	-13	True	AATAAA	-24
PB.4272.2	chr16	-	2199	4	full-splice_match	FOPNL	ENST00000573087.5	851	4	1	-1349	-1	0	multi-exon	FALSE	canonical	1	7779	junction_2	164910.92297830232	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	9275	False	AATAAA	-16
PB.4272.3	chr16	-	2235	6	novel_not_in_catalog	FOPNL	novel	2275	5	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	147952.44094694755	NA	2	NA	TRUE	NA	NA	NA	C	coding	174	525	36	560	20.0	9279	False	AATAAA	-16
PB.5367.4	chr18	+	911	4	full-splice_match	MYL12A	ENST00000217652.7	1229	4	312	6	-19	3	multi-exon	FALSE	canonical	1	3844037	junction_3	1428539.4047088795	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	84	599	45.0	-12	True	ATTAAA	-10
PB.4272.1	chr16	-	2354	6	full-splice_match	FOPNL	ENST00000573429.5	646	6	-8	-1700	1	0	multi-exon	FALSE	canonical	1	1953	junction_4	175182.955681653	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	38	634	20.0	9277	False	AATAAA	-16
PB.4272.6	chr16	-	2248	5	full-splice_match	FOPNL	ENST00000255759.10	2275	5	6	21	5	-20	multi-exon	FALSE	canonical	1	288987	junction_4	42010.6251470982	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	25	549	70.0	-17	True	NA	NA
PB.4272.7	chr16	-	1692	1	novel_in_catalog	FOPNL	novel	2275	5	NA	NA	-5	-13432	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-16	True	NA	NA
PB.4272.4	chr16	-	2085	4	full-splice_match	FOPNL	ENST00000575744.5	565	4	-20	-1500	0	0	multi-exon	FALSE	canonical	1	14892	junction_3	177282.3656888136	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	39	365	20.0	9276	False	AATAAA	-16
PB.4272.5	chr16	-	2115	4	full-splice_match	FOPNL	ENST00000575073.5	530	4	13	-1598	2	-19	multi-exon	FALSE	canonical	1	14305	junction_1	149296.1986886769	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	28	342	65.0	-20	True	NA	NA
PB.8134.3	chr3	-	3324	1	novel_in_catalog	TUSC2	novel	1691	3	NA	NA	2	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	176	531	1473	2003	25.0	-14	True	AATAAA	-16
PB.8134.2	chr3	-	1657	3	full-splice_match	TUSC2	ENST00000463304.1	475	3	-2	-1180	-2	-3	multi-exon	FALSE	canonical	1	49286	junction_1	215184.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-18	True	AATAAA	-19
PB.8134.1	chr3	-	1682	3	full-splice_match	TUSC2	ENST00000232496.4	1691	3	7	2	2	-2	multi-exon	FALSE	canonical	1	479654	junction_2	129832.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	138	470	20.0	-14	True	AATAAA	-20
PB.11026.9	chr8	-	3553	4	novel_not_in_catalog	BIN3	novel	1835	9	NA	NA	-1	-3018	intron_retention	FALSE	non_canonical	0	0	junction_1	177386.80451550568	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.11750.10	chr9	+	2460	2	full-splice_match	TRIM32	ENST00000450136.1	3717	2	33	1224	5	-1224	multi-exon	FALSE	canonical	1	47799	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	653	1962	129	2090	10.0	-2	True	ATTAAA	-35
PB.11855.2	chr9	+	6717	11	full-splice_match	ABL1	ENST00000372348.6	3824	11	-903	-1990	-903	-2	multi-exon	FALSE	canonical	1	100191	junction_1	115565.64082671804	NA	14	1	TRUE	NA	NA	NA	C	coding	1149	3450	1278	4727	20.0	0	True	AATAAA	-17
PB.1111.6	chr1	-	1809	7	novel_in_catalog	TMEM206	novel	2475	8	NA	NA	-24	-6	no_combination_of_known_junctions	FALSE	canonical	1	11811	junction_2	73431.003409096	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	169	918	50.0	-40	False	AATAAA	-10
PB.2965.4	chr12	+	3015	12	novel_in_catalog	P2RX7	novel	2134	11	NA	NA	-7	-20	combination_of_known_junctions	FALSE	canonical	1	4694	junction_3	18697.98537165643	NA	3	1	TRUE	NA	NA	NA	C	coding	344	1035	730	1764	95.0	-20	True	NA	NA
PB.2965.3	chr12	+	1501	13	full-splice_match	P2RX7	ENST00000328963.9	5161	13	50	3610	-24	-255	multi-exon	FALSE	canonical	1	40254	junction_8	10494.378035603953	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1407	94	1500	15.0	-64	True	NA	NA
PB.2965.2	chr12	+	3132	13	full-splice_match	P2RX7	ENST00000328963.9	5161	13	50	1979	-24	-20	multi-exon	FALSE	canonical	1	40254	junction_8	10494.378035603953	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	94	1881	95.0	-64	True	NA	NA
PB.2965.1	chr12	+	2162	13	full-splice_match	P2RX7	ENST00000328963.9	5161	13	48	2951	24	0	multi-exon	FALSE	canonical	1	40254	junction_8	10494.378035603953	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	96	1883	65.0	-66	True	NA	NA
PB.60.2	chr1	-	3046	15	full-splice_match	DNAJC11	ENST00000294401.11	2210	15	108	-944	3	-1	multi-exon	FALSE	canonical	1	7074	junction_5	168389.9764734062	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	17	1540	5.0	-11	True	AATAAA	-17
PB.5244.8	chr17	-	4301	15	novel_in_catalog	GGA3	novel	3766	16	NA	NA	0	197	intron_retention	FALSE	canonical	1	218829	junction_13	72778.81350702138	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	37	993	55.0	-21	True	NA	NA
PB.5244.9	chr17	-	3552	18	full-splice_match	GGA3	ENST00000621870.4	4034	18	-6	488	-6	197	multi-exon	FALSE	canonical	1	17408	junction_17	117175.86281926601	NA	13	NA	TRUE	NA	NA	NA	C	coding	651	1956	405	2360	55.0	-4	True	NA	NA
PB.866.9	chr1	-	4603	9	novel_in_catalog	ARHGAP30	novel	4857	10	NA	NA	7	0	intron_retention	FALSE	canonical	1	277986	junction_5	34799.60935484765	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	285	1124	30.0	-18	True	AATAAA	-13
PB.5244.2	chr17	-	4036	18	full-splice_match	GGA3	ENST00000621870.4	4034	18	-3	1	-3	0	multi-exon	FALSE	canonical	1	17408	junction_17	117175.86281926601	NA	1	NA	TRUE	NA	NA	NA	C	coding	651	1956	402	2357	25.0	-1	True	AATAAA	-15
PB.5244.3	chr17	-	3962	17	novel_in_catalog	GGA3	novel	3766	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	18202	junction_12	101274.99734292069	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	709	2283	25.0	-4	True	AATAAA	-15
PB.866.4	chr1	-	4253	12	novel_not_in_catalog	ARHGAP30	novel	4857	10	NA	NA	-6	0	intron_retention	FALSE	canonical	1	51429	junction_1	91570.9419028504	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	353	3487	30.0	6505	False	AATAAA	-13
PB.5244.1	chr17	-	4134	16	novel_in_catalog	GGA3	novel	3766	16	NA	NA	-8	0	intron_retention	FALSE	canonical	1	218829	junction_14	74142.89429221567	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	22	2223	25.0	-6	True	AATAAA	-15
PB.5244.6	chr17	-	3707	15	novel_in_catalog	GGA3	novel	3766	16	NA	NA	-5	-1	no_combination_of_known_junctions	FALSE	canonical	1	234	junction_14	108235.47243868579	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	74	2029	25.0	-3	True	AATAAA	-14
PB.5244.4	chr17	-	3794	16	full-splice_match	GGA3	ENST00000538886.5	3766	16	-29	1	2	0	multi-exon	FALSE	canonical	1	38027	junction_13	100632.93691528412	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	43	2115	25.0	-27	True	AATAAA	-15
PB.5244.5	chr17	-	3883	17	full-splice_match	GGA3	ENST00000537686.5	4069	17	184	2	1	-1	multi-exon	FALSE	canonical	1	218829	junction_15	73803.96150082219	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	34	2205	25.0	-18	True	AATAAA	-14
PB.842.4	chr1	-	2303	1	novel_in_catalog	AIM2	novel	1529	6	NA	NA	137	-8146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.7527.7	chr21	+	3412	14	full-splice_match	MX2	ENST00000330714.7	3042	14	84	-454	0	7	multi-exon	FALSE	canonical	1	30808	junction_1	68057.4055094268	NA	2	NA	TRUE	NA	NA	NA	C	coding	715	2148	101	2248	30.0	-1	True	AATAAA	-21
PB.7433.14	chr20	+	3266	6	full-splice_match	PCMTD2	ENST00000308824.10	3843	6	-3	580	-3	-3	multi-exon	FALSE	canonical	1	89660	junction_1	126483.499160009	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	131	1216	25.0	17	True	AATAAA	-12
PB.7433.12	chr20	+	3397	6	full-splice_match	PCMTD2	ENST00000369758.8	3212	6	12	-197	-3	197	multi-exon	FALSE	canonical	1	25677	junction_4	167763.21922113918	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	143	1147	45.0	5	True	AGTAAA	-16
PB.7433.13	chr20	+	4456	6	novel_in_catalog	PCMTD2	novel	1049	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	45668	junction_1	142637.03154314452	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	1321	2406	25.0	8	True	AATAAA	-12
PB.7433.10	chr20	+	5038	6	novel_in_catalog	PCMTD2	novel	1049	6	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	45668	junction_1	142637.03154314452	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	1328	2413	35.0	1	True	AATAAA	-17
PB.7433.11	chr20	+	7549	5	novel_in_catalog	PCMTD2	novel	1049	6	NA	NA	3	196	intron_retention	FALSE	canonical	1	312141	junction_4	59541.56273772129	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	4215	5300	45.0	4	True	AGTAAA	-15
PB.3921.2	chr15	-	7872	12	full-splice_match	CSNK1G1	ENST00000303052.12	8179	12	90	217	4	-1	multi-exon	FALSE	canonical	1	67731	junction_11	28027.704249914248	NA	4	NA	TRUE	NA	NA	NA	C	coding	422	1269	407	1675	5.0	-59	True	AATAAA	-21
PB.3921.3	chr15	-	2597	1	incomplete-splice_match	CSNK1G1	ENST00000303052.12	8179	12	187929	217	34849	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-5312	False	AATAAA	-21
PB.3921.4	chr15	-	4196	12	full-splice_match	CSNK1G1	ENST00000303052.12	8179	12	86	3897	0	-1514	multi-exon	FALSE	canonical	1	67731	junction_11	28027.704249914248	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	411	1679	65.0	-63	True	NA	NA
PB.3921.5	chr15	-	2825	12	full-splice_match	CSNK1G1	ENST00000303052.12	8179	12	88	5266	2	351	multi-exon	FALSE	canonical	1	67731	junction_11	28027.704249914248	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	409	1677	70.0	-61	True	NA	NA
PB.3921.6	chr15	-	2443	12	full-splice_match	CSNK1G1	ENST00000303052.12	8179	12	85	5651	-1	-31	multi-exon	FALSE	canonical	1	67731	junction_11	28027.704249914248	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	412	1680	90.0	-64	True	AAGAAA	-30
PB.7527.2	chr21	+	2904	13	novel_in_catalog	MX2	novel	3042	14	NA	NA	0	1	no_combination_of_known_junctions	TRUE	canonical	1	14586	junction_5	88798.60364279228	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	967	2193	25.0	-8579	False	AATAAA	-26
PB.11059.6	chr8	-	1858	10	full-splice_match	ZNF395	ENST00000344423.9	4808	10	-3	2953	-3	-9	multi-exon	FALSE	canonical	1	2707	junction_9	121975.89127253137	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	136	1677	80.0	-10	True	NA	NA
PB.7527.3	chr21	+	3212	14	novel_not_in_catalog	MX2	novel	3042	14	NA	NA	13	-285	any annotated donor/acceptor	FALSE	canonical	1	2261	junction_11	86546.44849344427	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	172	2787	35.0	-8566	False	NA	NA
PB.10561.1	chr7	-	1679	1	antisense	novelGene_ZNF736_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.5475.1	chr18	-	1474	6	full-splice_match	RPL17	ENST00000579408.5	859	6	-625	10	14	-10	multi-exon	FALSE	canonical	1	2455	junction_1	1223530.1737143062	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	895	1449	50.0	-15	True	AATAAA	-8
PB.2121.11	chr11	-	2091	9	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-38	105	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	101243.26088675915	NA	2	NA	TRUE	NA	NA	NA	B	coding	296	891	240	1130	70.0	4	True	NA	NA
PB.2121.10	chr11	-	1640	10	novel_not_in_catalog	KMT5B	novel	5837	11	NA	NA	-36	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	111293.57048326547	NA	2	NA	TRUE	NA	NA	NA	B	coding	296	891	238	1128	10.0	6	True	AATAAA	-16
PB.1021.5	chr1	+	3906	10	full-splice_match	NEK7	ENST00000367385.8	4149	10	32	211	1	-211	multi-exon	FALSE	canonical	1	247655	junction_1	151996.90365129235	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	332	1219	35.0	-3	True	ATTAAA	-14
PB.8493.12	chr3	+	3002	18	full-splice_match	GFM1	ENST00000486715.5	3721	18	282	437	32	239	multi-exon	FALSE	canonical	1	243185	junction_1	122751.98640564996	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	76	2331	15.0	33	True	ATTAAA	-17
PB.842.3	chr1	-	1527	6	full-splice_match	AIM2	ENST00000368130.8	1529	6	0	2	0	-2	multi-exon	FALSE	canonical	1	59970	junction_5	18368.972175927538	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	290	1321	25.0	-67	False	NA	NA
PB.6617.9	chr2	-	2705	3	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-406939	-47398	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	1	TRUE	NA	NA	NA	B	coding	103	312	96	407	45.0	NA	False	ATTAAA	-16
PB.2979.1	chr12	+	4451	11	incomplete-splice_match	MLXIP	ENST00000319080.11	8427	17	52127	2929	907	0	5prime_fragment	FALSE	canonical	1	177409	junction_5	62025.72804764165	NA	0	NA	TRUE	NA	NA	NA	A	coding	609	1830	16	1845	100.0	-7703	False	NA	NA
PB.8280.1	chr3	+	4402	16	full-splice_match	ALCAM	ENST00000306107.9	4701	16	305	-6	-129	6	multi-exon	FALSE	canonical	1	442440	junction_1	97004.90393835196	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	196	1947	15.0	-31	True	AATAAA	-24
PB.11422.10	chr9	+	3309	26	incomplete-splice_match	DOCK8	ENST00000453981.5	7237	47	0	60164	0	-4	3prime_fragment	FALSE	canonical	1	87916	junction_1	43383.44685183048	NA	0	NA	TRUE	NA	NA	NA	C	coding	1069	3207	102	3308	50.0	2	True	AATAAA	-15
PB.11422.11	chr9	+	3213	25	incomplete-splice_match	DOCK8	ENST00000469391.5	6386	46	-22	59431	0	-4	3prime_fragment	FALSE	canonical	1	8473	junction_21	56343.20619795194	NA	1	NA	TRUE	NA	NA	NA	C	coding	1037	3111	102	3212	50.0	2	True	AATAAA	-15
PB.11422.12	chr9	+	7320	48	novel_in_catalog	DOCK8	novel	741	5	NA	NA	1	-3	intron_retention	FALSE	canonical	1	3852	junction_2	79414.49209459708	NA	0	NA	TRUE	NA	NA	NA	C	coding	2031	6096	192	6287	25.0	5	True	AATAAA	-23
PB.9483.45	chr5	+	3886	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	1	2779	junction_1	1073148.7050576655	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	303	2846	30.0	2	True	AAAAAG	-45
PB.6822.3	chr2	+	2125	14	full-splice_match	PPIG	ENST00000260970.7	6368	14	11	4232	-2	360	multi-exon	FALSE	canonical	1	215149	junction_1	96492.30853972478	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1914	210	2123	70.0	0	True	NA	NA
PB.6331.1	chr2	-	4304	1	novel_in_catalog	LINC01376	novel	2080	8	NA	NA	46	-298852	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	1	True	NA	NA
PB.6822.2	chr2	+	2410	14	full-splice_match	PPIG	ENST00000260970.7	6368	14	13	3945	0	-160	multi-exon	FALSE	canonical	1	215149	junction_1	96492.30853972478	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2202	208	2409	70.0	2	True	AAAAAG	-43
PB.7488.1	chr21	+	4762	11	novel_not_in_catalog	HUNK	novel	7385	11	NA	NA	-95017	-2062	any annotated donor/acceptor	FALSE	canonical	1	41	junction_1	8184.724879921133	NA	0	NA	TRUE	NA	NA	NA	A	coding	638	1917	28	1944	15.0	NA	False	AATACA	-13
PB.6617.3	chr2	-	5311	2	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-166154	-45976	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	23	NA	FALSE	NA	NA	NA	B	coding	142	429	3913	4341	5.0	NA	False	AATAAA	-22
PB.1111.2	chr1	-	4171	7	novel_in_catalog	TMEM206	novel	2475	8	NA	NA	14	-6	intron_retention	FALSE	canonical	1	145313	junction_2	34404.60431718729	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	125	931	50.0	4	True	AATAAA	-10
PB.6617.2	chr2	-	4134	3	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-105201	-45975	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	5.5	NA	3	1	TRUE	NA	NA	NA	B	coding	110	333	95	427	5.0	NA	False	AATAAA	-23
PB.2188.1	chr11	-	2124	3	full-splice_match	NDUFC2	ENST00000281031.4	2518	3	349	45	-9	0	multi-exon	FALSE	canonical	1	2282163	junction_1	135775.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	119	360	127	486	20.0	-9	True	AATAAA	-14
PB.2188.2	chr11	-	611	3	full-splice_match	NDUFC2	ENST00000281031.4	2518	3	358	1549	0	3	multi-exon	FALSE	canonical	1	2282163	junction_1	135775.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	118	477	15.0	0	True	ATTAAA	-16
PB.6617.1	chr2	-	4260	3	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-406939	-45974	intron_retention	TRUE	non_canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	B	coding	142	429	2860	3288	5.0	NA	False	AATAAA	-24
PB.7203.1	chr20	+	3618	2	intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	296	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	A	coding	111	336	401	736	35.0	-70	False	NA	NA
PB.2114.3	chr11	+	1296	1	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	3	-209	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-28	True	NA	NA
PB.2114.2	chr11	+	2949	8	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	-8	0	intron_retention	FALSE	canonical	1	1718450	junction_7	290575.7838717705	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	1551	2873	10.0	-39	True	AATAAA	-21
PB.2114.1	chr11	+	2894	9	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	1	0	intron_retention	TRUE	canonical	1	1718450	junction_8	276240.28628484724	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	1727	2818	10.0	-57	True	AATAAA	-21
PB.2114.7	chr11	+	3278	8	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	1718450	junction_7	292512.3313546467	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	1687	2124	10.0	-17	True	AATAAA	-21
PB.2114.6	chr11	+	4101	6	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	1718450	junction_5	330276.951951298	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	3504	4025	10.0	-22	True	AATAAA	-21
PB.2114.5	chr11	+	2714	8	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1036592	junction_1	464235.8599812498	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	75	785	10.0	-27	True	AATAAA	-21
PB.2114.4	chr11	+	4229	6	novel_in_catalog	NDUFV1	novel	2528	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	1718450	junction_5	338650.45168291155	NA	2	NA	TRUE	NA	NA	NA	C	coding	171	516	3638	4153	10.0	-28	True	AATAAA	-21
PB.2248.2	chr11	-	3050	10	full-splice_match	MMP8	ENST00000236826.7	3056	10	1	5	-1	-5	multi-exon	TRUE	canonical	1	20139	junction_9	7549.939558256962	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	99	1502	20.0	0	True	ATTAAA	-43
PB.2248.1	chr11	-	3123	11	novel_in_catalog	MMP8	novel	3056	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4015	junction_9	13046.535883520959	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	140	1570	15.0	-1	True	ATTAAA	-35
PB.2114.8	chr11	+	1530	10	full-splice_match	NDUFV1	ENST00000322776.10	1596	10	100	-34	-2	5	multi-exon	FALSE	canonical	1	1036592	junction_1	409439.58967641986	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	54	1448	5.0	-6	True	AATAAA	-27
PB.8885.18	chr4	+	4787	25	novel_not_in_catalog	SMARCAD1	novel	5017	24	NA	NA	9	-3	any annotated donor/acceptor	FALSE	canonical	1	6056	junction_11	94289.74886630484	NA	4	1	TRUE	NA	NA	NA	C	coding	529	1590	246	1835	30.0	10	True	AATAAA	-15
PB.10379.3	chr7	+	3450	6	novel_in_catalog	RNF216P1	novel	659	5	NA	NA	-3	0	intron_retention	FALSE	canonical	1	5141	junction_2	71342.8801868834	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-16	True	ATTAAA	-18
PB.8280.3	chr3	+	3377	16	full-splice_match	ALCAM	ENST00000306107.9	4701	16	314	1010	-120	-24	multi-exon	FALSE	canonical	1	442440	junction_1	97004.90393835196	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	187	1938	60.0	-22	True	NA	NA
PB.1111.1	chr1	-	2457	8	full-splice_match	TMEM206	ENST00000261455.8	2475	8	14	4	14	-4	multi-exon	TRUE	canonical	1	145313	junction_3	32466.44608307639	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	125	1177	40.0	4	True	ATTAAA	-13
PB.11912.2	chr9	+	1639	4	novel_not_in_catalog	PHPT1	novel	985	5	NA	NA	-769	9	intron_retention	FALSE	canonical	1	48273	junction_1	1176005.9945740073	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	650	1027	10.0	-9	True	ATTAAA	-27
PB.8355.8	chr3	-	3685	11	novel_in_catalog	CCDC14	novel	374	2	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	2255	junction_8	152368.36909152108	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	417	2627	15.0	159	False	ATTAAA	-19
PB.7964.10	chr3	-	4983	28	full-splice_match	ANKRD28	ENST00000399451.6	6564	28	216	1365	-86	1191	multi-exon	FALSE	canonical	1	75227	junction_27	86088.07768534677	NA	1	NA	TRUE	NA	NA	NA	C	coding	1053	3162	153	3314	30.0	-13	True	AATAAA	-26
PB.8355.6	chr3	-	3716	9	novel_in_catalog	CCDC14	novel	374	2	NA	NA	-33	0	intron_retention	FALSE	canonical	1	9441	junction_8	145334.03824761554	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	454	2664	25.0	-7	True	ATTAAA	-13
PB.8355.7	chr3	-	3385	13	novel_in_catalog	CCDC14	novel	374	2	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	40206	junction_5	149488.30326174817	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	85	2325	10.0	-29	True	ATTAAA	-21
PB.8355.4	chr3	-	3960	13	novel_not_in_catalog	CCDC14	novel	374	2	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	3713	junction_11	149261.97309063593	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	165	2900	10.0	-36	True	ATTAAA	-21
PB.8355.5	chr3	-	3856	12	full-splice_match	CCDC14	ENST00000409657.5	3815	12	-35	-6	-35	-2	multi-exon	FALSE	canonical	1	7021	junction_11	153248.13858921046	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	586	2796	10.0	0	True	ATTAAA	-21
PB.8355.2	chr3	-	4521	10	novel_in_catalog	CCDC14	novel	374	2	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	166439	junction_8	108301.02922917568	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	1251	3461	10.0	149	False	ATTAAA	-21
PB.7964.13	chr3	-	4997	29	novel_not_in_catalog	ANKRD28	novel	6383	28	NA	NA	-326	1187	any annotated donor/acceptor	FALSE	canonical	1	471	junction_28	106901.21516483389	NA	1	NA	TRUE	NA	NA	NA	C	coding	899	2700	633	3332	40.0	-1	True	AATAAA	-22
PB.11688.6	chr9	-	2595	15	novel_in_catalog	TEX10	novel	3006	15	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	27643	junction_12	88259.34371940805	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	770	2494	40.0	-15	True	ATTAAA	-12
PB.8355.1	chr3	-	4015	12	full-splice_match	CCDC14	ENST00000488653.6	4156	12	143	-2	-5	2	multi-exon	FALSE	canonical	1	18313	junction_8	146370.9670819743	NA	3	NA	TRUE	NA	NA	NA	C	coding	864	2595	93	2687	85.0	169	False	NA	NA
PB.3387.2	chr14	+	2303	7	full-splice_match	PSMA6	ENST00000261479.8	1029	7	-16	-1258	-8	1239	multi-exon	FALSE	canonical	1	336592	junction_5	394534.3536438099	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	137	877	25.0	1	True	NA	NA
PB.9921.1	chr6	+	1721	1	full-splice_match	B3GALT4	ENST00000451237.2	1694	1	-27	0	-27	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	378	1137	316	1452	10.0	-278	False	AATAAA	-15
PB.1153.10	chr1	+	2099	9	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-12	16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	22158.970691559098	NA	22	4	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-16	True	ATTAAA	-29
PB.5545.5	chr19	-	3902	20	novel_in_catalog	POLRMT	novel	469	4	NA	NA	-27	-2	intron_retention	FALSE	canonical	1	10817	junction_9	36518.76470385937	NA	1	NA	TRUE	NA	NA	NA	C	coding	1168	3507	41	3547	20.0	-16	True	AATAAA	-17
PB.5545.6	chr19	-	4420	20	novel_in_catalog	POLRMT	novel	469	4	NA	NA	-29	1	intron_retention	FALSE	canonical	1	10817	junction_9	39650.64147647355	NA	2	NA	TRUE	NA	NA	NA	C	coding	1159	3480	43	3522	20.0	-18	True	AATAAA	-16
PB.5545.7	chr19	-	4221	21	novel_not_in_catalog	POLRMT	novel	469	4	NA	NA	-37	0	any annotated donor/acceptor	FALSE	canonical	1	10817	junction_10	40584.47008783039	NA	1	NA	TRUE	NA	NA	NA	C	coding	1201	3606	51	3656	20.0	51	False	AATAAA	-15
PB.5545.1	chr19	-	3770	21	full-splice_match	POLRMT	ENST00000588649.6	3835	21	67	-2	-12	2	multi-exon	TRUE	canonical	1	10817	junction_10	39207.53121311644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	26	3718	25.0	-1	True	AATAAA	-21
PB.5545.2	chr19	-	3809	21	novel_not_in_catalog	POLRMT	novel	469	4	NA	NA	-30	2	any annotated donor/acceptor	FALSE	canonical	1	10817	junction_10	40170.6811443371	NA	1	NA	TRUE	NA	NA	NA	C	coding	1237	3714	44	3757	25.0	-19	True	AATAAA	-21
PB.7964.14	chr3	-	1859	1	incomplete-splice_match	ANKRD28	ENST00000624145.3	6383	28	127719	1371	5758	1185	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	3707	False	AATAAA	-20
PB.9945.4	chr6	+	4849	2	incomplete-splice_match	DEF6	ENST00000316637.6	2262	11	-10	7364	-10	1869	intron_retention	FALSE	canonical	1	313991	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	24	True	NA	NA
PB.11953.16	chrX	-	2614	3	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	8	-22	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	90.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	404	634	85.0	NA	False	NA	NA
PB.11953.15	chrX	-	2971	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-13	-22	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	69.21733886823446	NA	1	NA	TRUE	NA	NA	NA	C	coding	82	249	425	673	85.0	NA	False	NA	NA
PB.11953.14	chrX	-	3034	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-54	-22	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	71.10555533852471	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	466	762	85.0	NA	False	NA	NA
PB.11953.13	chrX	-	3125	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-23	-22	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	71.10555533852471	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	959	1300	85.0	NA	False	NA	NA
PB.11953.12	chrX	-	3403	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-13	-22	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	71.10555533852471	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	425	655	85.0	NA	False	NA	NA
PB.11953.11	chrX	-	3588	5	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-9	-22	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	476.3865945846923	NA	4	NA	TRUE	NA	NA	NA	C	coding	76	231	421	651	85.0	NA	False	NA	NA
PB.11953.10	chrX	-	3733	5	novel_in_catalog	BX890604.2	novel	3629	13	NA	NA	-76	-22	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	815.7626799504866	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	1567	1908	85.0	NA	False	NA	NA
PB.1153.15	chr1	+	2500	4	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-3	1658	any annotated donor/acceptor	TRUE	canonical	1	84	junction_2	1958.4092751232797	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-7	True	ATTAAA	-15
PB.9248.8	chr5	+	4367	30	full-splice_match	IPO11	ENST00000325324.10	4356	30	0	-11	0	6	multi-exon	FALSE	canonical	1	117982	junction_1	62642.4956851362	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	170	3097	20.0	-10	True	ATTAAA	-25
PB.9248.9	chr5	+	5864	31	novel_not_in_catalog	KIF2A	novel	759	6	NA	NA	50428	92705	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	78012.49239495059	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	170	2395	5.0	-10	True	ATTAAA	-20
PB.11953.19	chrX	-	2499	3	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-22	-45	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	90.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	87	264	434	697	70.0	NA	False	NA	NA
PB.11953.18	chrX	-	2889	5	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-17	-45	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	77.94228634059948	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	429	659	70.0	NA	False	NA	NA
PB.5790.4	chr19	+	3766	12	full-splice_match	ZNF333	ENST00000292530.10	4672	12	-44	950	2	165	multi-exon	FALSE	canonical	1	44487	junction_1	16757.38101393774	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	136	2133	35.0	-10	True	ATTAAA	-29
PB.5790.5	chr19	+	2819	12	full-splice_match	ZNF333	ENST00000292530.10	4672	12	-32	1885	0	-770	multi-exon	FALSE	canonical	1	44487	junction_1	16757.38101393774	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	124	2121	65.0	2	True	NA	NA
PB.4053.9	chr15	+	4690	31	novel_not_in_catalog	AKAP13	novel	5459	15	NA	NA	-75	-908	any annotated donor/acceptor	FALSE	canonical	1	16470	junction_1	135788.38741872917	NA	1	1	TRUE	NA	NA	NA	C	coding	1452	4356	333	4688	70.0	2	True	NA	NA
PB.5790.1	chr19	+	4091	13	novel_in_catalog	ZNF333	novel	1756	7	NA	NA	-3	165	combination_of_known_junctions	TRUE	canonical	1	1079	junction_5	28451.33920349308	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	788	2458	35.0	-21	True	ATTAAA	-29
PB.5790.2	chr19	+	4709	12	full-splice_match	ZNF333	ENST00000292530.10	4672	12	-47	10	-1	-10	multi-exon	FALSE	canonical	1	44487	junction_1	16757.38101393774	NA	2	NA	TRUE	NA	NA	NA	C	coding	665	1998	139	2136	30.0	-13	True	NA	NA
PB.12315.1	chrX	+	1627	2	novel_in_catalog	MAGEA3	novel	1724	3	NA	NA	11	-5	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	118	1062	5.0	NA	False	AATAAA	-12
PB.4053.3	chr15	+	5503	16	incomplete-splice_match	AKAP13	ENST00000394518.6	13215	37	-122	64485	6	-4	3prime_fragment	FALSE	canonical	1	64889	junction_1	83063.70660322513	NA	0	NA	TRUE	NA	NA	NA	C	coding	1762	5286	218	5503	30.0	-12	True	AATAAA	-22
PB.4053.2	chr15	+	5582	17	novel_in_catalog	AKAP13	novel	712	2	NA	NA	-3	0	intron_retention	FALSE	canonical	1	32846	junction_12	91456.63190952515	NA	6	NA	TRUE	NA	NA	NA	C	coding	1785	5355	227	5581	20.0	-21	True	AATAAA	-26
PB.4053.1	chr15	+	5472	15	full-splice_match	AKAP13	ENST00000559362.5	5459	15	-17	4	-1	-4	multi-exon	FALSE	canonical	1	64889	junction_1	85481.41683564676	NA	1	NA	TRUE	NA	NA	NA	C	coding	1744	5232	241	5472	30.0	-35	True	AATAAA	-22
PB.12048.10	chrX	+	3117	16	full-splice_match	CDK16	ENST00000357227.8	3144	16	23	4	1	0	multi-exon	FALSE	canonical	1	167524	junction_1	327833.5020903548	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	402	1892	35.0	-1	True	ATTAAA	-13
PB.4053.6	chr15	+	5580	17	novel_not_in_catalog	AKAP13	novel	712	2	NA	NA	19	-4	intron_retention	FALSE	canonical	1	3408	junction_2	98146.31271697118	NA	0	NA	TRUE	NA	NA	NA	C	coding	1595	4785	796	5580	30.0	1	True	AATAAA	-22
PB.4053.5	chr15	+	5599	17	novel_not_in_catalog	AKAP13	novel	712	2	NA	NA	19	-4	intron_retention	FALSE	canonical	1	10917	junction_6	98340.74389111866	NA	0	NA	TRUE	NA	NA	NA	C	coding	1469	4407	1193	5599	30.0	1	True	AATAAA	-22
PB.12048.14	chrX	+	2850	17	novel_not_in_catalog	CDK16	novel	562	3	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	428079.0305794889	NA	7	NA	TRUE	NA	NA	NA	C	coding	496	1491	135	1625	35.0	0	True	ATTAAA	-13
PB.3760.7	chr15	-	4697	2	full-splice_match	ZNF770	ENST00000559564.1	563	2	-70	-4064	-8	-633	multi-exon	FALSE	canonical	1	7694	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	240	2312	80.0	-9	True	NA	NA
PB.3760.6	chr15	-	4760	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	32	647	-30	-647	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	690	2073	317	2389	70.0	31	True	NA	NA
PB.3760.5	chr15	-	5226	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	-17	230	-17	-230	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	366	2438	55.0	363	False	AATAAA	-15
PB.3760.4	chr15	-	5332	2	full-splice_match	ZNF770	ENST00000559564.1	563	2	-74	-4695	-12	-2	multi-exon	FALSE	canonical	1	7694	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	244	2316	5.0	-13	True	AATAAA	-14
PB.5559.7	chr19	-	1272	8	full-splice_match	POLR2E	ENST00000615234.4	2831	8	-16	1575	1	-6	multi-exon	FALSE	canonical	1	1177838	junction_6	564289.1103179182	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	59	691	30.0	1	True	AATAAA	-28
PB.3760.2	chr15	-	5446	3	full-splice_match	ZNF770	ENST00000356321.4	5439	3	-8	1	-8	-1	multi-exon	FALSE	canonical	1	124526	junction_2	62446.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	357	2429	5.0	-9	True	AATAAA	-15
PB.12155.18	chrX	-	2213	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	23	1030	90.0	-2	True	NA	NA
PB.12155.19	chrX	-	2237	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	27	1034	90.0	-6	True	NA	NA
PB.2162.4	chr11	+	3427	12	full-splice_match	POLD3	ENST00000263681.6	3821	12	70	324	-5	-324	multi-exon	FALSE	canonical	1	148275	junction_8	32316.02658431799	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	60	1460	35.0	-32	True	AATAAA	-30
PB.2162.5	chr11	+	3663	8	incomplete-splice_match	POLD3	ENST00000263681.6	3821	12	84	14765	9	9522	3prime_fragment	FALSE	canonical	1	210639	junction_2	12728.047463963117	NA	4	NA	TRUE	NA	NA	NA	C	coding	300	903	46	948	45.0	-18	True	NA	NA
PB.4772.1	chr17	+	1834	1	antisense	novelGene_GAS7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	4945	False	NA	NA
PB.2162.7	chr11	+	2544	12	full-splice_match	POLD3	ENST00000263681.6	3821	12	97	1180	-17	763	multi-exon	FALSE	canonical	1	148275	junction_8	32316.02658431799	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	33	1433	60.0	-5	True	NA	NA
PB.12155.12	chrX	-	2497	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	35	1042	90.0	-14	True	NA	NA
PB.12155.13	chrX	-	2403	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	27	1034	90.0	-6	True	NA	NA
PB.2162.2	chr11	+	2014	12	full-splice_match	POLD3	ENST00000263681.6	3821	12	65	1742	-10	201	multi-exon	FALSE	canonical	1	148275	junction_8	32316.02658431799	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	65	1465	15.0	-37	True	ACTAAA	-19
PB.2162.3	chr11	+	3174	12	full-splice_match	POLD3	ENST00000263681.6	3821	12	78	569	3	-569	multi-exon	FALSE	canonical	1	148275	junction_8	32316.02658431799	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	52	1452	30.0	-24	True	ATTAAA	-29
PB.8280.4	chr3	+	4173	16	full-splice_match	ALCAM	ENST00000306107.9	4701	16	-4	532	-4	454	multi-exon	FALSE	canonical	1	442440	junction_1	97004.90393835196	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	658	2256	65.0	-4	True	AATAAA	-5
PB.7016.1	chr2	-	1514	1	antisense	novelGene_CYP27A1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9537.1	chr5	+	4462	1	novel_in_catalog	SPRY4-AS1	novel	591	4	NA	NA	60	-23802	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	64	False	NA	NA
PB.11153.1	chr8	-	2499	2	intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3810	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	A	coding	197	594	1695	2288	80.0	19	False	NA	NA
PB.4262.11	chr16	+	2418	7	novel_in_catalog	BFAR	novel	3039	8	NA	NA	1	-342	no_combination_of_known_junctions	FALSE	canonical	1	11422	junction_4	213091.7147448227	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	149	793	40.0	-7	True	AATAAA	-23
PB.4262.10	chr16	+	2771	7	novel_in_catalog	BFAR	novel	3039	8	NA	NA	5	-1	intron_retention	FALSE	canonical	1	11422	junction_4	213091.7147448227	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	156	800	55.0	-14	True	AATAAA	-29
PB.4262.12	chr16	+	2464	7	novel_in_catalog	BFAR	novel	3039	8	NA	NA	-12	-218	combination_of_known_junctions	FALSE	canonical	1	34317	junction_2	190787.49422364897	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	337	1278	10.0	11	True	TATAAA	-22
PB.4980.2	chr17	+	5197	4	full-splice_match	CNP	ENST00000393892.7	5217	4	25	-5	3	5	multi-exon	FALSE	canonical	1	445247	junction_1	349930.42517715815	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	120	1385	25.0	-2	True	AATAAA	-17
PB.4980.3	chr17	+	4176	4	full-splice_match	CNP	ENST00000393892.7	5217	4	54	987	0	-987	multi-exon	FALSE	canonical	1	445247	junction_1	349930.42517715815	NA	16	NA	TRUE	NA	NA	NA	C	coding	421	1266	91	1356	50.0	0	True	NA	NA
PB.4980.1	chr17	+	2865	5	novel_not_in_catalog	CNP	novel	5217	4	NA	NA	-25	-1	any annotated donor/acceptor	FALSE	canonical	1	1134	junction_3	501494.7384841141	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	170	1144	10.0	-9764	False	AATAAA	-16
PB.4980.6	chr17	+	1959	3	full-splice_match	CNP	ENST00000472031.1	1019	3	7	-947	7	-1	multi-exon	FALSE	canonical	1	9273	junction_1	563314.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	148	708	10.0	2	True	AATAAA	-16
PB.4980.7	chr17	+	1931	5	novel_not_in_catalog	CNP	novel	5217	4	NA	NA	7	-3	any annotated donor/acceptor	FALSE	canonical	1	1182	junction_4	506047.7888428004	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	116	1297	10.0	2	True	AATAAA	-14
PB.4980.4	chr17	+	3004	4	novel_in_catalog	CNP	novel	5217	4	NA	NA	7	-4	intron_retention	FALSE	canonical	1	960	junction_1	558573.3424939726	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	551	1756	10.0	2	True	AATAAA	-13
PB.6372.12	chr2	-	2831	16	novel_not_in_catalog	SLC5A6	novel	2307	3	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	148606.585068989	NA	4	1	TRUE	NA	NA	NA	C	coding	415	1248	295	1542	15.0	-1	True	AATAAA	-19
PB.3988.1	chr15	+	2777	2	incomplete-splice_match	C15orf39	ENST00000394987.4	4430	3	4943	649	376	-649	5prime_fragment	FALSE	canonical	1	150030	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	548	1647	727	2373	5.0	-909	False	NA	NA
PB.4980.9	chr17	+	5756	3	novel_in_catalog	CNP	novel	5217	4	NA	NA	0	-3	intron_retention	FALSE	canonical	1	445247	junction_1	345327.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	233	702	91	792	10.0	0	True	AATAAA	-14
PB.4966.25	chr17	-	3646	28	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	66	7934	66	-67	3prime_fragment	FALSE	canonical	1	528600	junction_24	222475.97725638558	NA	1	NA	TRUE	NA	NA	NA	C	coding	1184	3552	94	3645	60.0	-4	True	TTTAAA	-43
PB.3524.10	chr14	+	6278	9	novel_in_catalog	EXD2	novel	3252	9	NA	NA	1	9	intron_retention	FALSE	canonical	1	54881	junction_1	48400.939766024945	NA	3	NA	TRUE	NA	NA	NA	C	coding	567	1704	194	1897	40.0	1	True	AATAAA	-27
PB.4966.27	chr17	-	3554	26	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	45	10270	45	-2403	3prime_fragment	FALSE	canonical	1	528600	junction_22	201591.40506719623	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3438	115	3552	55.0	17	False	AAGAAA	-18
PB.4966.26	chr17	-	3578	27	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	54	10106	54	-2239	3prime_fragment	FALSE	canonical	1	528600	junction_23	223412.08604538252	NA	0	NA	TRUE	NA	NA	NA	C	coding	1157	3471	106	3576	55.0	-16	True	NA	NA
PB.1042.7	chr1	-	3158	12	novel_not_in_catalog	KLHL12	novel	3359	12	NA	NA	53	-7	any annotated donor/acceptor	FALSE	canonical	1	455	junction_11	53537.14880898161	NA	4	NA	TRUE	NA	NA	NA	C	coding	508	1527	222	1748	25.0	24	True	ATTAAA	-14
PB.1378.2	chr10	-	1996	7	novel_not_in_catalog	LINC01518	novel	519	4	NA	NA	-9	1185	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	3300.402488081315	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-6	True	AATAAA	-15
PB.7117.2	chr2	+	2825	6	novel_not_in_catalog	ING5	novel	4199	8	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	90574.82271448286	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	39	524	15.0	0	True	TATAAA	-13
PB.1378.1	chr10	-	3523	5	novel_not_in_catalog	LINC01518	novel	519	4	NA	NA	-16	2878	any annotated donor/acceptor	FALSE	canonical	1	1392	junction_4	3031.52134867957	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-13	True	TATAAA	-17
PB.10091.11	chr6	-	2952	29	full-splice_match	SNX14	ENST00000505648.5	3193	29	240	1	-3	0	multi-exon	FALSE	canonical	1	13280	junction_28	149615.86537920492	NA	1	NA	TRUE	NA	NA	NA	C	coding	894	2685	100	2784	20.0	8149	False	AATAAA	-30
PB.5924.2	chr19	+	885	9	full-splice_match	FXYD5	ENST00000392219.6	872	9	-15	2	-2	0	multi-exon	FALSE	canonical	1	2152756	junction_1	393895.32558726816	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	83	619	20.0	-7	True	AGTAAA	-17
PB.4687.2	chr17	+	3408	25	full-splice_match	PLD2	ENST00000572940.5	3391	25	-21	4	-21	-4	multi-exon	FALSE	canonical	1	39167	junction_23	50522.55478056861	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	80	2848	25.0	-35	True	AATAAA	-8
PB.961.5	chr1	-	3340	13	full-splice_match	ABL2	ENST00000344730.7	6910	13	13	3557	0	-6	multi-exon	FALSE	canonical	1	31022	junction_12	42974.90304591222	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	33	3227	25.0	-3	True	AATGAA	-24
PB.961.6	chr1	-	3276	12	full-splice_match	ABL2	ENST00000504405.5	3132	12	-32	-112	0	-7	multi-exon	FALSE	canonical	1	46815	junction_11	40621.010006731034	NA	0	NA	TRUE	NA	NA	NA	C	coding	1043	3132	33	3164	30.0	-3	True	AATGAA	-23
PB.4687.1	chr17	+	3465	25	full-splice_match	PLD2	ENST00000263088.10	3503	25	36	2	36	-2	multi-exon	FALSE	canonical	1	81567	junction_1	43247.46301259811	NA	2	NA	TRUE	NA	NA	NA	C	coding	933	2802	96	2897	15.0	-51	True	AATAAA	-16
PB.8280.6	chr3	+	4446	16	full-splice_match	ALCAM	ENST00000306107.9	4701	16	-26	281	-26	-242	multi-exon	FALSE	canonical	1	442440	junction_1	97004.90393835196	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	680	2278	70.0	-2427	False	NA	NA
PB.9950.8	chr6	-	4158	16	novel_in_catalog	SRPK1	novel	4592	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	10088	junction_6	220634.8100440484	NA	5	NA	TRUE	NA	NA	NA	C	coding	231	696	1194	1889	35.0	-1	True	AATAAA	-19
PB.9950.9	chr6	-	4112	15	novel_in_catalog	SRPK1	novel	4592	16	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	2004	junction_8	161406.5259614963	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	731	1843	35.0	-3	True	AATAAA	-19
PB.9950.6	chr6	-	4230	15	novel_not_in_catalog	SRPK1	novel	4592	16	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	156573.44002025222	NA	1	1	TRUE	NA	NA	NA	C	coding	637	1914	48	1961	35.0	-9	True	AATAAA	-19
PB.1898.2	chr11	-	1286	6	full-splice_match	COMMD9	ENST00000263401.9	2954	6	0	1668	0	0	multi-exon	FALSE	canonical	1	328589	junction_4	91540.2952396375	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	18	614	15.0	-6	True	ACTAAA	-19
PB.1898.1	chr11	-	2955	6	full-splice_match	COMMD9	ENST00000263401.9	2954	6	5	-6	0	6	multi-exon	FALSE	canonical	1	328589	junction_4	91540.2952396375	NA	7	NA	TRUE	NA	NA	NA	C	coding	198	597	13	609	25.0	-1	True	AATAAA	-23
PB.9950.5	chr6	-	4374	17	novel_in_catalog	SRPK1	novel	4592	16	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	12323	junction_15	192259.79274611044	NA	3	NA	TRUE	NA	NA	NA	C	coding	548	1647	459	2105	35.0	-3	True	AATAAA	-19
PB.9950.3	chr6	-	2123	1	incomplete-splice_match	SRPK1	ENST00000373825.6	4592	16	86185	69	3684	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-19
PB.9950.1	chr6	-	4255	16	full-splice_match	SRPK1	ENST00000373825.6	4592	16	244	93	-3	-25	multi-exon	FALSE	canonical	1	388970	junction_2	91632.64998086411	NA	6	NA	TRUE	NA	NA	NA	C	coding	655	1968	43	2010	60.0	-4	True	NA	NA
PB.3526.14	chr14	+	2927	7	full-splice_match	SLC39A9	ENST00000336643.9	3560	7	5	628	5	-628	multi-exon	FALSE	canonical	1	273651	junction_6	41686.0123369405	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	674	1597	20.0	5	True	AAGAAA	-14
PB.3526.13	chr14	+	2292	1	novel_in_catalog	SLC39A9	novel	944	5	NA	NA	-1	-28477	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-3	True	NA	NA
PB.3526.12	chr14	+	3585	7	full-splice_match	SLC39A9	ENST00000336643.9	3560	7	-8	-17	-6	17	multi-exon	FALSE	canonical	1	273651	junction_6	41686.0123369405	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	687	1610	20.0	-323	False	AATAAA	-35
PB.3526.11	chr14	+	5338	6	full-splice_match	SLC39A9	ENST00000557046.1	855	6	-688	-3795	-8	0	multi-exon	FALSE	canonical	1	27332	junction_3	126423.381599133	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	689	1543	25.0	-325	False	ATTAAA	-21
PB.3526.10	chr14	+	2746	7	full-splice_match	SLC39A9	ENST00000336643.9	3560	7	-14	828	-12	645	multi-exon	FALSE	canonical	1	273651	junction_6	41686.0123369405	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	693	1616	0.0	-329	False	CATAAA	-44
PB.953.1	chr1	+	2429	1	antisense	novelGene_COP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.35.3	chr1	+	1472	8	novel_not_in_catalog	RER1	novel	3000	6	NA	NA	-23	7	any annotated donor/acceptor	FALSE	canonical	1	60073	junction_1	721334.9686289007	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	248	838	30.0	-37	False	TATAAA	-25
PB.7209.4	chr20	-	2084	8	novel_not_in_catalog	APMAP	novel	2117	10	NA	NA	-125	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	428895.90962376876	NA	25	3	TRUE	NA	NA	NA	C	coding	378	1137	80	1216	20.0	14	False	AATAAA	-14
PB.11228.4	chr8	-	2957	2	full-splice_match	TMEM64	ENST00000418210.2	4663	2	161	1545	161	-1545	multi-exon	FALSE	canonical	1	21949	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	422	826	20.0	-32	True	AATAAA	-24
PB.9401.16	chr5	-	2867	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	159	731	22	-731	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	223	897	25.0	-5	True	ATTAAA	-13
PB.10976.1	chr8	+	2391	7	full-splice_match	ERI1	ENST00000250263.7	4615	7	83	2141	-4	-2140	multi-exon	TRUE	canonical	1	154351	junction_1	25092.211793037826	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	178	1227	35.0	-10	True	AATAAA	-18
PB.8367.1	chr3	-	2898	16	full-splice_match	TXNRD3	ENST00000524230.6	2950	16	57	-5	3	5	multi-exon	FALSE	canonical	1	39823	junction_15	14088.742307088862	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	655	2034	25.0	3	True	CATAAA	-17
PB.7642.2	chr22	-	2061	4	full-splice_match	ZNF280B	ENST00000626650.2	5721	4	369	3291	-52	-2839	multi-exon	FALSE	canonical	1	14738	junction_2	5996.339939218478	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	375	2006	75.0	-44	True	ATTAAA	-10
PB.6396.2	chr2	+	2272	4	full-splice_match	YPEL5	ENST00000402003.7	2197	4	-76	1	-10	-1	multi-exon	FALSE	canonical	1	8958	junction_2	353276.2264077345	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	218	583	20.0	-9666	False	AATAAA	-17
PB.6396.1	chr2	+	1298	4	novel_in_catalog	YPEL5	novel	2560	5	NA	NA	-19	-2	no_combination_of_known_junctions	FALSE	canonical	1	50915	junction_1	341435.8412453046	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	227	592	5.0	-9675	False	AATAAA	-11
PB.7642.1	chr22	-	4866	4	full-splice_match	ZNF280B	ENST00000626650.2	5721	4	404	451	-17	1	multi-exon	FALSE	canonical	1	14738	junction_2	5996.339939218478	NA	2	NA	TRUE	NA	NA	NA	C	coding	543	1632	340	1971	75.0	-9	True	NA	NA
PB.6396.7	chr2	+	2547	5	full-splice_match	YPEL5	ENST00000379520.7	2560	5	12	1	-8	-1	multi-exon	FALSE	canonical	1	16190	junction_2	316915.0447560829	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	493	858	20.0	-16	True	AATAAA	-17
PB.6396.6	chr2	+	1943	3	full-splice_match	YPEL5	ENST00000261353.8	2182	3	-11	250	9	-250	multi-exon	FALSE	canonical	1	721018	junction_1	38249.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	138	503	20.0	-19	True	ATTAAA	-21
PB.6396.5	chr2	+	2027	2	novel_in_catalog	YPEL5	novel	2560	5	NA	NA	9	-1	no_combination_of_known_junctions	FALSE	canonical	1	7338	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-19	True	AATAAA	-17
PB.1521.1	chr10	-	2067	1	antisense	novelGene_STAMBPL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	7625	False	NA	NA
PB.6396.9	chr2	+	2392	4	novel_not_in_catalog	YPEL5	novel	2560	5	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	12739	junction_2	352239.6036169446	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	338	703	20.0	0	True	AATAAA	-17
PB.6396.8	chr2	+	2472	4	full-splice_match	YPEL5	ENST00000379519.7	2499	4	28	-1	6	1	multi-exon	FALSE	canonical	1	90827	junction_2	332248.3172177099	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	416	781	20.0	0	True	AATAAA	-19
PB.4459.1	chr16	-	4142	2	full-splice_match	ZNF319	ENST00000562909.1	517	2	-235	-3390	-235	-1	multi-exon	FALSE	canonical	1	16387	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	546	2294	5.0	-17	True	AGTAAA	-26
PB.10459.19	chr7	+	2490	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	22887	junction_14	383921.94040182483	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2340	116	2455	90.0	-20	True	AATATA	-11
PB.7721.4	chr22	-	10747	9	novel_in_catalog	PRR14L	novel	1849	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	5997	junction_8	42778.72782704039	NA	1	NA	TRUE	NA	NA	NA	C	coding	2151	6456	115	6570	35.0	-3	True	AATAAA	-19
PB.4459.2	chr16	-	4314	3	novel_not_in_catalog	ZNF319	novel	4221	2	NA	NA	-236	-3	any annotated donor/acceptor	FALSE	canonical	1	3758	junction_2	24704.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	720	2468	5.0	-18	True	AGTAAA	-24
PB.8272.1	chr3	+	2803	1	full-splice_match	ZBTB11-AS1	ENST00000609682.1	2743	1	-66	6	-66	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-41	False	AATAAA	-9
PB.6404.8	chr2	+	2507	12	novel_not_in_catalog	BIRC6	novel	15703	74	NA	NA	-1022	26	any annotated donor/acceptor	FALSE	canonical	1	4050	junction_7	93025.57480536075	NA	0	NA	TRUE	NA	NA	NA	B	coding	399	1200	1	1200	70.0	-9392	False	NA	NA
PB.10459.18	chr7	+	2488	18	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	1348	junction_6	472695.0869348872	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	852	2453	90.0	-22	True	AATATA	-11
PB.8708.1	chr4	-	3635	7	full-splice_match	QDPR	ENST00000281243.9	1648	7	144	-2131	-1	2131	multi-exon	FALSE	canonical	1	583355	junction_6	145918.28372804722	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	37	771	10.0	-1	True	AATAAA	-12
PB.6404.1	chr2	+	6726	33	novel_in_catalog	BIRC6	novel	15703	74	NA	NA	114	-20	combination_of_known_junctions	TRUE	canonical	1	59044	junction_13	65990.30185724233	NA	1	NA	TRUE	NA	NA	NA	B	coding	2235	6705	21	6725	75.0	-74	True	ACTAAA	-33
PB.6404.3	chr2	+	6757	34	novel_in_catalog	BIRC6	novel	15703	74	NA	NA	-126	-22	combination_of_known_junctions	FALSE	canonical	1	98647	junction_13	64594.76041813751	NA	0	NA	TRUE	NA	NA	NA	B	coding	2236	6708	48	6755	75.0	-17	True	ACTAAA	-31
PB.6404.2	chr2	+	6844	34	novel_not_in_catalog	BIRC6	novel	15703	74	NA	NA	140	-20	any annotated donor/acceptor	FALSE	canonical	1	54605	junction_23	71129.82937685777	NA	14	2	TRUE	NA	NA	NA	B	coding	2255	6765	79	6843	75.0	-48	True	ACTAAA	-33
PB.6404.5	chr2	+	11652	58	novel_in_catalog	BIRC6	novel	15703	74	NA	NA	-106	26	combination_of_known_junctions	TRUE	canonical	1	54605	junction_23	64168.25389085839	NA	5	NA	TRUE	NA	NA	NA	B	coding	3875	11625	28	11652	70.0	3	True	NA	NA
PB.8708.2	chr4	-	1546	7	full-splice_match	QDPR	ENST00000281243.9	1648	7	100	2	-45	-2	multi-exon	FALSE	canonical	1	583355	junction_6	145918.28372804722	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	81	815	35.0	99	False	AATAAA	-12
PB.12292.10	chrX	-	3421	22	full-splice_match	ARHGEF6	ENST00000250617.6	6019	22	1146	1452	1146	-1452	multi-exon	FALSE	canonical	1	32070	junction_6	79659.74142259525	NA	3	NA	TRUE	NA	NA	NA	C	coding	776	2331	61	2391	25.0	-11	True	AAAACA	-31
PB.6404.6	chr2	+	6902	29	incomplete-splice_match	BIRC6	ENST00000421745.6	15703	74	142701	17	-3131	6	5prime_fragment	FALSE	canonical	1	177986	junction_1	103425.27226113326	NA	1	NA	TRUE	NA	NA	NA	B	coding	1945	5838	87	5924	20.0	-8576	False	AATAAA	-21
PB.6787.9	chr2	-	2686	8	novel_in_catalog	NR4A2	novel	3472	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	48620	junction_2	79343.77049091054	NA	9	NA	TRUE	NA	NA	NA	C	coding	455	1368	367	1734	85.0	-36	True	AATAAA	-33
PB.5429.12	chr18	-	3371	11	novel_in_catalog	SS18	novel	3414	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	10595	junction_7	247457.51463433073	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	355	1272	15.0	-1	True	AATAAA	-15
PB.5429.11	chr18	-	3307	10	full-splice_match	SS18	ENST00000269137.11	1836	10	288	-1759	0	-2	multi-exon	FALSE	canonical	1	369480	junction_9	113209.13000523947	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	45	1208	15.0	-1	True	AATAAA	-15
PB.5429.10	chr18	-	3406	11	full-splice_match	SS18	ENST00000542420.6	2321	11	3	-1088	2	-2	multi-exon	FALSE	canonical	1	24345	junction_10	229986.36850789658	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	120	1307	15.0	1	True	AATAAA	-15
PB.5429.17	chr18	-	3333	10	novel_in_catalog	SS18	novel	3414	11	NA	NA	49	-3	combination_of_known_junctions	FALSE	canonical	1	3380	junction_9	204696.58580445353	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	141	1235	15.0	72	False	AATAAA	-14
PB.5429.16	chr18	-	3794	14	novel_in_catalog	SS18	novel	3414	11	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	2647	junction_10	280096.2952834521	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	596	1696	15.0	13	True	AATAAA	-14
PB.5429.15	chr18	-	4125	10	novel_in_catalog	SS18	novel	3414	11	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	173602	junction_3	164282.2680680427	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	68	1108	15.0	579	False	AATAAA	-14
PB.6787.1	chr2	-	3456	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	1	-2	intron_retention	TRUE	canonical	1	2302	junction_6	89962.56266097921	NA	2	NA	TRUE	NA	NA	NA	C	coding	555	1668	479	2146	10.0	-36	True	AATAAA	-17
PB.8708.4	chr4	-	1321	7	full-splice_match	QDPR	ENST00000281243.9	1648	7	55	272	27	130	multi-exon	FALSE	canonical	1	583355	junction_6	145918.28372804722	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	126	860	35.0	54	False	ATTAAA	-29
PB.6787.3	chr2	-	3413	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	-2	-7	any annotated donor/acceptor	FALSE	canonical	1	4342	junction_2	89506.63520473479	NA	2	NA	TRUE	NA	NA	NA	C	coding	580	1743	366	2108	25.0	-35	True	AATAAA	-12
PB.5429.18	chr18	-	3332	10	novel_in_catalog	SS18	novel	3414	11	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	1	24345	junction_9	198797.66071884235	NA	8	NA	TRUE	NA	NA	NA	C	coding	364	1095	140	1234	15.0	-19	False	AATAAA	-14
PB.6787.5	chr2	-	3289	8	full-splice_match	NR4A2	ENST00000426264.5	2642	8	-7	-640	-1	-10	multi-exon	FALSE	canonical	1	23804	junction_6	84758.92650960856	NA	2	NA	TRUE	NA	NA	NA	C	coding	535	1608	380	1987	30.0	-38	True	AATAAA	-9
PB.6787.4	chr2	-	3374	8	novel_in_catalog	NR4A2	novel	3472	8	NA	NA	-26	-7	combination_of_known_junctions	FALSE	canonical	1	48620	junction_2	79343.77049091054	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	394	1761	25.0	9791	False	AATAAA	-12
PB.6787.7	chr2	-	3233	8	full-splice_match	NR4A2	ENST00000339562.8	3472	8	-430	669	-426	-1	multi-exon	FALSE	canonical	1	78091	junction_7	64206.55093572014	NA	2	NA	TRUE	NA	NA	NA	C	coding	598	1797	794	2590	80.0	-8	True	AATAAA	-32
PB.6787.6	chr2	-	3440	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	-51	-12	intron_retention	FALSE	canonical	1	27330	junction_3	82839.23360463978	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	419	2140	40.0	9766	False	AATAAA	-7
PB.7735.1	chr22	+	1552	5	full-splice_match	HMOX1	ENST00000216117.8	1822	5	261	9	3	-9	multi-exon	FALSE	canonical	1	612723	junction_1	89781.77789333145	NA	0	NA	TRUE	NA	NA	NA	A	coding	280	843	103	945	25.0	0	True	AATAAA	-17
PB.6428.19	chr2	-	1754	8	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	2	-1	intron_retention	FALSE	canonical	1	394649	junction_5	931644.7307625765	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	106	519	20.0	-1	True	AATAAA	-15
PB.6428.18	chr2	-	1900	6	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	2	-1	intron_retention	FALSE	canonical	1	381799	junction_1	1054689.4515230537	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	20.0	-1	True	AATAAA	-15
PB.7074.1	chr2	+	2521	8	novel_not_in_catalog	EIF4E2	novel	1604	7	NA	NA	-25	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	412549.39090400474	NA	3	1	TRUE	NA	NA	NA	C	coding	234	705	77	781	30.0	-441	False	AATAAA	-15
PB.8470.7	chr3	+	3681	7	full-splice_match	SELENOT	ENST00000477889.5	944	7	5	-2742	5	0	multi-exon	FALSE	canonical	1	17605	junction_1	208337.2131663392	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	462	875	35.0	-25	True	AATAAA	-15
PB.6428.13	chr2	-	3749	5	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2207138	junction_4	409692.9768512636	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	20.0	-1	True	AATAAA	-15
PB.6428.12	chr2	-	1023	7	full-splice_match	SRSF7	ENST00000446327.6	2453	7	135	1295	-1	-1	multi-exon	FALSE	canonical	1	381799	junction_1	981245.881937077	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	104	784	20.0	1	True	AATAAA	-15
PB.7334.21	chr20	-	1984	8	novel_not_in_catalog	ZMYND8	novel	5362	22	NA	NA	-7	3385	any annotated donor/acceptor	FALSE	canonical	1	1037	junction_1	141224.16009800785	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	318	818	95.0	2	True	NA	NA
PB.7334.20	chr20	-	3575	22	full-splice_match	ZMYND8	ENST00000352431.6	3832	22	-7	264	0	56	multi-exon	FALSE	canonical	1	152684	junction_1	80573.43514424162	NA	0	NA	TRUE	NA	NA	NA	C	coding	1160	3483	37	3519	70.0	-8	True	NA	NA
PB.6428.17	chr2	-	1936	7	full-splice_match	SRSF7	ENST00000443213.5	1903	7	-9	-24	2	-1	multi-exon	FALSE	canonical	1	2207138	junction_6	352283.41599705705	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	20.0	-1	True	AATAAA	-15
PB.6428.16	chr2	-	2359	7	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2207138	junction_6	350592.2686975174	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	105	815	20.0	0	True	AATAAA	-15
PB.6428.15	chr2	-	2449	6	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2207138	junction_5	366833.81762896397	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	105	503	20.0	0	True	AATAAA	-15
PB.6428.14	chr2	-	3235	6	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2207138	junction_5	383765.1847760033	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	20.0	-1	True	AATAAA	-15
PB.4671.1	chr17	-	2097	12	full-splice_match	P2RX5	ENST00000552276.5	1642	12	-149	-306	-5	306	multi-exon	FALSE	canonical	1	18970	junction_1	80718.71936802035	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	241	1536	30.0	-6	True	NA	NA
PB.4671.3	chr17	-	3748	9	novel_in_catalog	P2RX5-TAX1BP3	novel	5905	15	NA	NA	39	-10167	intron_retention	FALSE	canonical	1	150389	junction_8	37067.85961162986	NA	1	NA	TRUE	NA	NA	NA	B	coding	288	867	151	1017	20.0	-1	True	AATAAA	-14
PB.4671.2	chr17	-	2043	12	full-splice_match	P2RX5	ENST00000225328.9	2309	12	263	3	-45	0	multi-exon	FALSE	canonical	1	150389	junction_11	38375.49436212112	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	137	1405	20.0	13	True	AATAAA	-14
PB.4671.5	chr17	-	2121	13	novel_not_in_catalog	P2RX5-TAX1BP3	novel	5905	15	NA	NA	39	-10167	any annotated donor/acceptor	FALSE	canonical	1	1742	junction_1	91098.27926048999	NA	1	1	TRUE	NA	NA	NA	B	coding	420	1263	151	1413	20.0	-1	True	AATAAA	-14
PB.4671.4	chr17	-	3647	14	novel_not_in_catalog	P2RX5-TAX1BP3	novel	5905	15	NA	NA	39	-10167	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	97652.63606472962	NA	1	NA	TRUE	NA	NA	NA	B	coding	439	1320	151	1470	20.0	-1	True	AATAAA	-14
PB.4671.7	chr17	-	1937	11	full-splice_match	P2RX5	ENST00000551178.5	1863	11	-77	3	-14	0	multi-exon	FALSE	canonical	1	43497	junction_9	78849.0695065579	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	106	1299	20.0	0	True	AATAAA	-14
PB.6293.2	chr2	+	3546	5	full-splice_match	RPS7	ENST00000491937.6	554	5	0	-2992	0	0	multi-exon	FALSE	canonical	1	6118	junction_4	439728.6973691847	NA	3	NA	TRUE	NA	NA	NA	C	coding	119	360	47	406	15.0	0	True	AATAAA	-18
PB.4671.8	chr17	-	1833	11	novel_in_catalog	P2RX5-TAX1BP3	novel	5905	15	NA	NA	41	-10167	no_combination_of_known_junctions	FALSE	canonical	1	5429	junction_5	78077.80412313092	NA	1	NA	TRUE	NA	NA	NA	B	coding	348	1047	149	1195	20.0	1	True	AATAAA	-14
PB.8812.12	chr4	-	2553	9	novel_in_catalog	GRSF1	novel	6666	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	18152	junction_1	497164.4761323334	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	57	1454	25.0	6	True	AATAAA	-32
PB.10459.16	chr7	+	2677	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	7	21	any annotated donor/acceptor	FALSE	canonical	1	22887	junction_14	383921.94040182483	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2340	124	2463	40.0	-28	True	AATAAA	-29
PB.5427.15	chr18	-	2487	23	novel_not_in_catalog	OSBPL1A	novel	4195	28	NA	NA	7	1105	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	162264.7586260716	NA	11	2	TRUE	NA	NA	NA	C	coding	711	2133	355	2487	80.0	-11	True	NA	NA
PB.5427.14	chr18	-	2542	24	incomplete-splice_match	OSBPL1A	ENST00000319481.7	4195	28	35	8331	-1	1105	3prime_fragment	FALSE	canonical	1	41387	junction_10	155596.44492159254	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2370	173	2542	80.0	-1	True	NA	NA
PB.5427.17	chr18	-	1898	5	novel_in_catalog	OSBPL1A	novel	4195	28	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	6702	junction_1	41911.730046611054	NA	5	NA	TRUE	NA	NA	NA	C	coding	100	303	229	531	15.0	-57	False	NA	NA
PB.5427.16	chr18	-	2383	23	novel_in_catalog	OSBPL1A	novel	4195	28	NA	NA	-12	1105	no_combination_of_known_junctions	FALSE	canonical	1	13855	junction_5	152792.75391604126	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2235	149	2383	80.0	23	True	NA	NA
PB.5427.11	chr18	-	2004	14	full-splice_match	OSBPL1A	ENST00000399443.7	3317	14	271	1042	271	47	multi-exon	FALSE	canonical	1	172313	junction_13	81848.30279104844	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	599	1912	85.0	-8	True	TTTAAA	-31
PB.5427.10	chr18	-	3116	28	full-splice_match	OSBPL1A	ENST00000319481.7	4195	28	36	1043	0	47	multi-exon	FALSE	canonical	1	41387	junction_14	167437.09072997526	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	172	3024	85.0	0	True	TTTAAA	-31
PB.5427.13	chr18	-	2670	26	novel_not_in_catalog	OSBPL1A	novel	4195	28	NA	NA	0	1105	any annotated donor/acceptor	FALSE	canonical	1	15	junction_11	159247.7931723564	NA	1	1	TRUE	NA	NA	NA	C	coding	833	2499	172	2670	80.0	0	True	NA	NA
PB.5427.12	chr18	-	2852	26	incomplete-splice_match	OSBPL1A	ENST00000319481.7	4195	28	14	4535	-4	-3422	3prime_fragment	FALSE	canonical	1	41387	junction_12	160886.83061531172	NA	2	NA	TRUE	NA	NA	NA	C	coding	886	2658	194	2851	35.0	-22	True	NA	NA
PB.9405.1	chr5	+	4177	1	novel_in_catalog	COMMD10	novel	842	6	NA	NA	58310	48020	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.6128.2	chr19	+	870	4	full-splice_match	FTL	ENST00000331825.10	878	4	8	0	8	0	multi-exon	FALSE	canonical	1	1992231	junction_2	4456766.584461006	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	200	727	5.0	0	True	AATAAA	-13
PB.1196.1	chr1	-	1438	7	full-splice_match	C1orf131	ENST00000366649.6	1424	7	-17	3	3	-3	multi-exon	FALSE	canonical	1	153645	junction_5	55876.99526763128	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	44	925	20.0	-41	True	AATAAA	-14
PB.1196.2	chr1	-	2282	1	novel_in_catalog	C1orf131	novel	2657	2	NA	NA	4	-2206	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-40	True	NA	NA
PB.6128.1	chr19	+	1570	1	novel_in_catalog	FTL	novel	878	4	NA	NA	8	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	77	234	200	433	5.0	0	True	AATAAA	-13
PB.208.3	chr1	+	4210	16	novel_in_catalog	WDTC1	novel	4819	16	NA	NA	6	-1	intron_retention	FALSE	canonical	1	15978	junction_14	130537.65164767171	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	378	2225	10.0	-99	False	ATTAAA	-13
PB.3758.20	chr15	-	1299	8	novel_in_catalog	GOLGA8B	novel	6488	23	NA	NA	0	7632	combination_of_known_junctions	FALSE	canonical	1	1046	junction_1	195449.3526886394	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-17	True	NA	NA
PB.4445.1	chr16	+	2175	16	full-splice_match	CPNE2	ENST00000290776.12	2645	16	66	404	-4	-1	multi-exon	FALSE	canonical	1	69676	junction_1	92909.01161076297	NA	0	NA	TRUE	NA	NA	NA	A	coding	548	1647	224	1870	25.0	1	True	AATAAA	-14
PB.9584.1	chr5	-	2988	9	full-splice_match	FAXDC2	ENST00000326080.9	3251	9	261	2	-32	1	multi-exon	FALSE	canonical	1	78319	junction_8	53811.96654090984	NA	0	NA	TRUE	NA	NA	NA	A	coding	333	1002	164	1165	25.0	33	False	AATAAA	-14
PB.8937.3	chr4	-	1790	4	full-splice_match	PITX2	ENST00000355080.9	2100	4	308	2	-24	-1	multi-exon	FALSE	canonical	1	11571	junction_2	26266.04603327692	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	275	1090	15.0	5132	False	AGTAAA	-15
PB.9540.5	chr5	-	3791	9	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	-553	0	intron_retention	FALSE	canonical	1	2228	junction_8	136606.21647406596	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	707	3040	90.0	3401	False	NA	NA
PB.8367.5	chr3	-	3217	11	novel_not_in_catalog	TXNRD3	novel	2950	16	NA	NA	-22	-18195	any annotated donor/acceptor	FALSE	canonical	1	1297	junction_1	20748.818077423108	NA	4	NA	TRUE	NA	NA	NA	C	coding	249	750	680	1429	30.0	-22	True	NA	NA
PB.7133.9	chr20	+	3908	8	full-splice_match	SIRPA	ENST00000358771.4	3996	8	84	4	84	-1	multi-exon	FALSE	canonical	1	4497	junction_3	75000.71488611674	NA	8	NA	TRUE	NA	NA	NA	C	coding	504	1515	69	1583	15.0	-27	True	AATAAA	-19
PB.7133.8	chr20	+	2655	10	novel_not_in_catalog	SIRPA	novel	4201	9	NA	NA	195	-1481	any annotated donor/acceptor	FALSE	canonical	1	292	junction_1	87459.245067222	NA	15	NA	TRUE	NA	NA	NA	C	coding	504	1515	296	1810	5.0	-1861	False	NA	NA
PB.1018.6	chr1	-	6384	18	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	47	18949	47	-18945	3prime_fragment	FALSE	canonical	1	114304	junction_1	21982.60768462006	NA	1	NA	TRUE	NA	NA	NA	C	coding	2058	6174	211	6384	60.0	21	True	AATACA	-12
PB.7133.5	chr20	+	3889	9	novel_not_in_catalog	SIRPA	novel	4201	9	NA	NA	146	1	any annotated donor/acceptor	FALSE	canonical	1	4497	junction_4	81146.68768964017	NA	8	1	TRUE	NA	NA	NA	C	coding	504	1515	48	1562	10.0	-7	True	AATAAA	-21
PB.7133.4	chr20	+	2458	9	novel_not_in_catalog	SIRPA	novel	4201	9	NA	NA	-77	-1481	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	82211.19326304889	NA	6	1	TRUE	NA	NA	NA	C	coding	504	1515	99	1613	5.0	-2408	False	NA	NA
PB.7133.7	chr20	+	2448	9	novel_not_in_catalog	SIRPA	novel	4201	9	NA	NA	153	-1433	any annotated donor/acceptor	FALSE	canonical	1	4497	junction_4	81146.68768964017	NA	5	NA	TRUE	NA	NA	NA	C	coding	504	1515	41	1555	10.0	0	True	AAAACA	-12
PB.7133.6	chr20	+	3813	9	novel_not_in_catalog	SIRPA	novel	4201	9	NA	NA	153	-8	any annotated donor/acceptor	FALSE	canonical	1	1163	junction_2	84069.78427612607	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	41	1495	25.0	0	True	AATAAA	-12
PB.7133.1	chr20	+	4069	9	full-splice_match	SIRPA	ENST00000400068.7	4201	9	134	-2	134	-1	multi-exon	FALSE	canonical	1	4497	junction_4	79754.56552830925	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	227	1741	10.0	-8	True	AATAAA	-22
PB.7133.3	chr20	+	3285	7	novel_in_catalog	SIRPA	novel	4201	9	NA	NA	-77	-1	no_combination_of_known_junctions	FALSE	canonical	1	14892	junction_1	82694.38559623554	NA	5	NA	TRUE	NA	NA	NA	C	coding	287	864	97	960	15.0	-2408	False	AATAAA	-19
PB.7133.2	chr20	+	2578	9	full-splice_match	SIRPA	ENST00000400068.7	4201	9	142	1481	142	-1481	multi-exon	FALSE	canonical	1	4497	junction_4	79754.56552830925	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	219	1733	5.0	0	True	NA	NA
PB.12220.7	chrX	+	5521	7	full-splice_match	TMEM164	ENST00000372068.6	5566	7	-67	112	-48	-112	multi-exon	FALSE	canonical	1	76712	junction_1	52487.01147506241	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	407	1300	20.0	-86	False	AATAAA	-31
PB.12220.6	chrX	+	4977	6	novel_in_catalog	TMEM164	novel	236	2	NA	NA	-54	2	no_combination_of_known_junctions	FALSE	canonical	1	1110	junction_1	85031.04789804721	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	202	642	20.0	-92	False	ATTAAA	-12
PB.12220.5	chrX	+	5234	7	novel_in_catalog	TMEM164	novel	236	2	NA	NA	25	2	combination_of_known_junctions	FALSE	canonical	1	3144	junction_1	77327.0057427474	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	387	899	20.0	-3	True	ATTAAA	-12
PB.12220.4	chrX	+	4840	6	full-splice_match	TMEM164	ENST00000372072.7	4975	6	23	112	23	-112	multi-exon	FALSE	canonical	1	31793	junction_1	72978.61723107667	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	179	619	20.0	-5	True	AATAAA	-31
PB.12220.3	chrX	+	4958	6	full-splice_match	TMEM164	ENST00000372072.7	4975	6	20	-3	20	-1	multi-exon	FALSE	canonical	1	31793	junction_1	72978.61723107667	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	182	622	15.0	-8	True	ATTAAA	-13
PB.2519.28	chr12	+	3843	11	incomplete-splice_match	STK38L	ENST00000389032.7	5068	14	64162	872	6201	-872	5prime_fragment	FALSE	canonical	1	256405	junction_9	47857.07539747911	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	168	1211	35.0	NA	False	ATTAAA	-13
PB.12220.1	chrX	+	5631	7	novel_in_catalog	TMEM164	novel	236	2	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	1	25616	junction_1	69534.25810047399	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	403	1296	20.0	-488	False	ATTAAA	-12
PB.6131.9	chr19	+	3477	2	incomplete-splice_match	SNRNP70	ENST00000544278.2	3221	3	2633	0	2633	0	5prime_fragment	FALSE	canonical	1	1963737	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	122	369	2950	3318	15.0	-9645	False	AATAAA	-15
PB.2519.25	chr12	+	4819	13	novel_in_catalog	STK38L	novel	545	5	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	20376	junction_3	109748.63564591084	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	54	1319	35.0	4	True	AATAAA	-13
PB.2519.24	chr12	+	4946	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	118	4	0	-4	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	58	1446	35.0	0	True	AATAAA	-13
PB.2519.27	chr12	+	2963	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	123	1982	5	1043	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	53	1441	50.0	5	True	TATAAA	-13
PB.2519.26	chr12	+	4798	13	novel_in_catalog	STK38L	novel	545	5	NA	NA	5	-2	no_combination_of_known_junctions	FALSE	canonical	1	435	junction_1	107737.73072760226	NA	8	1	TRUE	NA	NA	NA	C	coding	412	1239	58	1296	25.0	5	True	AATAAA	-15
PB.2519.21	chr12	+	1739	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	96	3233	4	43	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	80	1468	30.0	-22	True	AATAAA	-27
PB.2519.20	chr12	+	5097	15	novel_in_catalog	STK38L	novel	545	5	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	3673	junction_1	128273.40520655758	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	209	1597	35.0	-22	True	AATAAA	-13
PB.12220.9	chrX	+	5607	7	full-splice_match	TMEM164	ENST00000372073.5	5567	7	-45	5	-45	-1	multi-exon	FALSE	canonical	1	19211	junction_1	71741.99326986485	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	382	1275	25.0	-83	False	ATTAAA	-9
PB.2519.22	chr12	+	3861	13	novel_not_in_catalog	STK38L	novel	545	5	NA	NA	5	-983	any annotated donor/acceptor	FALSE	canonical	1	3522	junction_2	138831.65554135758	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	225	1340	15.0	-21	True	ATTAAA	-14
PB.8367.4	chr3	-	2535	17	novel_not_in_catalog	TXNRD3	novel	1134	4	NA	NA	8	-5	any annotated donor/acceptor	FALSE	canonical	1	1867	junction_5	23722.74032104731	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	650	1822	30.0	8	True	AATATA	-20
PB.4665.9	chr17	-	5230	26	novel_in_catalog	CLUH	novel	5224	26	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	4621	junction_25	154542.48320472141	NA	2	NA	TRUE	NA	NA	NA	B	coding	1310	3933	92	4024	10.0	-40	False	AATAAA	-21
PB.1018.5	chr1	-	6887	18	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	5	18488	5	-18484	3prime_fragment	FALSE	canonical	1	114304	junction_1	21982.60768462006	NA	4	NA	TRUE	NA	NA	NA	C	coding	2211	6633	253	6885	75.0	4	True	NA	NA
PB.4665.2	chr17	-	4675	27	novel_not_in_catalog	CLUH	novel	5224	26	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	171502.23169221374	NA	2	NA	TRUE	NA	NA	NA	B	coding	1356	4071	137	4207	10.0	-43	False	AATAAA	-22
PB.4665.3	chr17	-	5381	26	novel_in_catalog	CLUH	novel	5224	26	NA	NA	4	-1	combination_of_known_junctions	TRUE	canonical	1	119666	junction_25	139801.38651899557	NA	0	NA	TRUE	NA	NA	NA	B	coding	1348	4047	128	4174	10.0	-34	True	AATAAA	-22
PB.11273.1	chr8	-	2816	5	full-splice_match	ANKRD46	ENST00000335659.7	2649	5	0	-167	0	167	multi-exon	FALSE	canonical	1	114657	junction_4	48465.67150829543	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	180	866	25.0	-1	True	TATAAA	-13
PB.4665.6	chr17	-	5372	27	novel_not_in_catalog	CLUH	novel	5224	26	NA	NA	48	1	any annotated donor/acceptor	FALSE	canonical	1	698	junction_26	183066.0068701617	NA	1	NA	TRUE	NA	NA	NA	B	coding	1310	3933	234	4166	10.0	10	True	AATAAA	-21
PB.4665.4	chr17	-	6025	25	novel_in_catalog	CLUH	novel	5224	26	NA	NA	-6	1	intron_retention	FALSE	canonical	1	119666	junction_24	140041.3763108601	NA	3	NA	TRUE	NA	NA	NA	B	coding	830	2493	141	2633	10.0	-47	False	AATAAA	-21
PB.11273.5	chr8	-	2759	6	full-splice_match	ANKRD46	ENST00000519597.5	2779	6	18	2	-7	-2	multi-exon	FALSE	canonical	1	12127	junction_4	95517.81305201663	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	292	978	20.0	-8	True	AATAAA	-19
PB.2262.12	chr11	+	2628	19	novel_in_catalog	CUL5	novel	6351	19	NA	NA	76	-179	no_combination_of_known_junctions	FALSE	canonical	1	10528	junction_18	63028.10921728632	NA	1	NA	TRUE	NA	NA	NA	C	coding	742	2229	14	2242	90.0	-1	True	NA	NA
PB.11592.1	chr9	-	1808	2	antisense	novelGene_PIP5K1B_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	28207	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	109	330	106	435	70.0	-5	True	NA	NA
PB.4478.2	chr16	+	3100	12	full-splice_match	CES2	ENST00000417689.5	3868	12	5	763	5	0	multi-exon	FALSE	canonical	1	60216	junction_10	130479.03757435743	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	996	2819	95.0	-35	True	NA	NA
PB.4478.3	chr16	+	3034	13	novel_not_in_catalog	CES2	novel	3868	12	NA	NA	5	-8	intron_retention	FALSE	non_canonical	0	0	junction_12	143256.2920027909	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	996	2867	35.0	-35	True	AATAAA	-10
PB.4478.1	chr16	+	3383	12	full-splice_match	CES2	ENST00000568470.5	3391	12	8	0	4	0	multi-exon	FALSE	canonical	1	39915	junction_1	133712.49338520787	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	1702	3102	95.0	-5	True	NA	NA
PB.4478.6	chr16	+	3924	12	full-splice_match	CES2	ENST00000317091.8	3927	12	-3	6	1	-6	multi-exon	FALSE	canonical	1	273373	junction_1	79793.39182347254	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	988	2859	30.0	-27	True	AATAAA	-12
PB.4478.7	chr16	+	3415	12	novel_in_catalog	CES2	novel	3868	12	NA	NA	4	118	intron_retention	FALSE	canonical	1	9569	junction_1	141552.1996752756	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	1616	3016	70.0	-20	True	AGTAAA	-38
PB.4478.4	chr16	+	1911	1	novel_in_catalog	CES2	novel	3868	12	NA	NA	5	851	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	122	369	996	1364	65.0	-35	True	NA	NA
PB.4478.5	chr16	+	3234	12	full-splice_match	CES2	ENST00000568470.5	3391	12	-21	178	6	158	multi-exon	FALSE	canonical	1	39915	junction_1	133712.49338520787	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	1731	3131	25.0	-34	True	NA	NA
PB.4478.8	chr16	+	2749	12	full-splice_match	CES2	ENST00000317091.8	3927	12	479	699	-396	91	multi-exon	FALSE	canonical	1	273373	junction_1	79793.39182347254	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	506	2377	80.0	-9877	False	AGTAAA	-11
PB.4478.9	chr16	+	3667	11	incomplete-splice_match	CES2	ENST00000317091.8	3927	12	28	699	13	91	intron_retention	FALSE	canonical	1	273373	junction_1	78641.94415424888	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	957	2645	80.0	4	True	AGTAAA	-11
PB.6131.2	chr19	+	3180	11	full-splice_match	SNRNP70	ENST00000401730.5	3144	11	-34	-2	-2	0	multi-exon	FALSE	canonical	1	71236	junction_8	974333.0249173585	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	2650	3018	10.0	-1038	False	AATAAA	-18
PB.157.22	chr1	-	1180	9	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	2	-797	combination_of_known_junctions	FALSE	canonical	1	118260	junction_7	523960.78124057566	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	936	245	1180	55.0	341	False	AATAGA	-41
PB.6131.3	chr19	+	1679	10	full-splice_match	SNRNP70	ENST00000598441.5	1574	10	28	-133	0	7	multi-exon	FALSE	canonical	1	1780013	junction_7	446904.4929505162	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	197	1510	10.0	0	True	AATAAA	-25
PB.157.23	chr1	-	1009	8	incomplete-splice_match	HNRNPR	ENST00000606561.5	1837	9	-7	969	-7	-848	3prime_fragment	FALSE	canonical	1	118260	junction_6	596678.3949786398	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	771	239	1009	60.0	347	False	AATGAA	-5
PB.11790.2	chr9	+	3266	18	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	2577	junction_2	92852.14400656517	NA	1	NA	TRUE	NA	NA	NA	C	coding	967	2901	365	3265	45.0	-32	True	NA	NA
PB.157.20	chr1	-	1791	9	full-splice_match	HNRNPR	ENST00000606561.5	1837	9	-14	60	1	-60	multi-exon	FALSE	canonical	1	118260	junction_7	576776.627215627	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	246	1730	65.0	340	False	NA	NA
PB.3093.14	chr13	-	2960	18	full-splice_match	HSPH1	ENST00000320027.9	5191	18	24	2207	24	-283	multi-exon	FALSE	canonical	1	711764	junction_17	341484.71811072686	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	322	2898	50.0	-1	True	AATAAA	-27
PB.3093.15	chr13	-	2954	19	novel_not_in_catalog	HSPH1	novel	4987	16	NA	NA	27	-215	any annotated donor/acceptor	FALSE	canonical	1	297	junction_18	427133.09019917756	NA	3	1	TRUE	NA	NA	NA	C	coding	858	2577	248	2824	70.0	0	True	NA	NA
PB.3093.16	chr13	-	3005	17	full-splice_match	HSPH1	ENST00000380405.7	3480	17	-86	561	26	-216	multi-exon	FALSE	canonical	1	50949	junction_6	442665.2793938772	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	432	2876	70.0	-1	True	NA	NA
PB.3093.17	chr13	-	2553	18	full-splice_match	HSPH1	ENST00000630972.2	3570	18	375	642	26	-294	multi-exon	FALSE	canonical	1	26632	junction_17	424118.58533517	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	235	2502	35.0	-1	True	AATAAA	-16
PB.3093.11	chr13	-	3401	18	full-splice_match	HSPH1	ENST00000320027.9	5191	18	29	1761	29	163	multi-exon	FALSE	canonical	1	711764	junction_17	341484.71811072686	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2577	317	2893	60.0	4	True	ATTAAA	-12
PB.3093.13	chr13	-	2871	18	full-splice_match	HSPH1	ENST00000630972.2	3570	18	361	338	12	10	multi-exon	FALSE	canonical	1	26632	junction_17	424118.58533517	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	249	2516	20.0	662	False	ATTAAA	-24
PB.11790.1	chr9	+	5064	28	novel_not_in_catalog	GAPVD1	novel	3720	16	NA	NA	-33	0	intron_retention	TRUE	canonical	0	0	junction_2	88240.02403537786	NA	11	2	TRUE	NA	NA	NA	C	coding	1460	4383	403	4785	75.0	-65	False	AAAAAG	-31
PB.3093.19	chr13	-	2614	17	full-splice_match	HSPH1	ENST00000380405.7	3480	17	65	801	65	-456	multi-exon	FALSE	canonical	1	50949	junction_6	442665.2793938772	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2334	281	2614	60.0	-1	True	NA	NA
PB.3080.5	chr13	-	2130	7	full-splice_match	SLC46A3	ENST00000380814.4	2121	7	-11	2	-11	-2	multi-exon	FALSE	canonical	1	15792	junction_1	41648.80278291322	NA	4	NA	TRUE	NA	NA	NA	C	coding	463	1392	511	1902	55.0	31	False	AATAAA	-18
PB.9062.4	chr4	-	4885	12	full-splice_match	SH3RF1	ENST00000284637.13	5272	12	60	327	60	-327	multi-exon	FALSE	canonical	1	82739	junction_11	50931.49702888484	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	283	2949	65.0	4	True	TATAAA	-6
PB.3080.2	chr13	-	2766	7	full-splice_match	SLC46A3	ENST00000380814.4	2121	7	-11	-634	-11	-3	multi-exon	FALSE	canonical	1	15792	junction_1	41648.80278291322	NA	9	1	TRUE	NA	NA	NA	C	coding	463	1392	511	1902	60.0	31	False	NA	NA
PB.12296.10	chrX	-	2622	20	novel_not_in_catalog	ATP11C	novel	6924	29	NA	NA	30	7756	any annotated donor/acceptor	FALSE	canonical	1	7556	junction_19	48009.663826880555	NA	0	NA	TRUE	NA	NA	NA	B	coding	701	2103	518	2620	55.0	-14	True	NA	NA
PB.12296.11	chrX	-	2378	19	novel_not_in_catalog	ATP11C	novel	6924	29	NA	NA	45	-66	any annotated donor/acceptor	FALSE	canonical	1	7556	junction_18	48956.14065557955	NA	0	NA	TRUE	NA	NA	NA	B	coding	625	1875	503	2377	65.0	1	True	NA	NA
PB.12296.14	chrX	-	2080	16	novel_not_in_catalog	ATP11C	novel	6924	29	NA	NA	37	-4638	any annotated donor/acceptor	FALSE	canonical	1	7556	junction_15	50699.52511213055	NA	0	NA	TRUE	NA	NA	NA	B	coding	523	1569	511	2079	70.0	-7	True	NA	NA
PB.3080.3	chr13	-	2858	6	full-splice_match	SLC46A3	ENST00000266943.10	3173	6	-139	454	-10	183	multi-exon	FALSE	canonical	1	68380	junction_5	27783.783051269314	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	510	1895	35.0	32	False	TATAAA	-20
PB.7138.1	chr20	+	2332	11	novel_in_catalog	NOP56	novel	2400	12	NA	NA	-57	-3	intron_retention	FALSE	canonical	1	1017501	junction_1	662423.7502480493	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	87	1106	20.0	-5146	False	AATAAA	-12
PB.6021.2	chr19	+	1605	1	novel_in_catalog	AC243960.1	novel	661	7	NA	NA	-2	417	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-15
PB.7958.2	chr3	+	3888	22	novel_in_catalog	CAPN7	novel	781	4	NA	NA	1	9	combination_of_known_junctions	FALSE	canonical	1	6500	junction_1	74782.8094458665	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	528	2837	30.0	-24	True	AATAAA	-26
PB.6021.3	chr19	+	1997	8	novel_in_catalog	AC243960.1	novel	661	7	NA	NA	-1	31381	intron_retention	FALSE	canonical	1	7862	junction_1	6461.698841509665	NA	0	NA	TRUE	NA	NA	NA	B	coding	164	495	813	1307	10.0	1	True	AATAAA	-17
PB.4243.10	chr16	+	5409	19	novel_in_catalog	CIITA	novel	850	7	NA	NA	4	56	intron_retention	FALSE	canonical	1	95821	junction_6	27515.81805705157	NA	6	NA	TRUE	NA	NA	NA	C	coding	934	2805	130	2934	20.0	0	True	TATAAA	-15
PB.4243.11	chr16	+	5615	2	incomplete-splice_match	CIITA	ENST00000571186.5	1041	8	3	1983	3	-825	intron_retention	FALSE	canonical	1	106672	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	106	837	75.0	0	True	NA	NA
PB.3080.1	chr13	-	3325	6	full-splice_match	SLC46A3	ENST00000266943.10	3173	6	-155	3	-26	-3	multi-exon	FALSE	canonical	1	68380	junction_5	27783.783051269314	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	526	1911	60.0	16	False	NA	NA
PB.6021.1	chr19	+	2177	2	incomplete-splice_match	CEACAM21	ENST00000618577.4	451	3	-1	-1214	-1	1214	intron_retention	FALSE	canonical	1	7862	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	160	483	280	762	25.0	-1	True	NA	NA
PB.6150.1	chr19	-	1735	17	full-splice_match	PNKP	ENST00000322344.7	2041	17	305	1	-5	0	multi-exon	TRUE	canonical	1	159656	junction_16	100045.28363945999	NA	0	NA	TRUE	NA	NA	NA	A	coding	521	1566	127	1692	10.0	-27	True	AATAAA	-16
PB.6055.6	chr19	+	4277	5	full-splice_match	ZNF225	ENST00000262894.10	4482	5	54	151	-3	-151	multi-exon	FALSE	canonical	1	21818	junction_1	3818.9481863466017	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	227	2347	10.0	-17	True	ATTAAA	-36
PB.6055.5	chr19	+	2709	6	novel_in_catalog	ZNF225	novel	552	5	NA	NA	-22	39	combination_of_known_junctions	FALSE	canonical	1	2394	junction_1	13490.915002326565	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	411	2531	30.0	-36	True	NA	NA
PB.6055.4	chr19	+	2838	5	full-splice_match	ZNF225	ENST00000262894.10	4482	5	35	1609	-22	333	multi-exon	FALSE	canonical	1	21818	junction_1	3818.9481863466017	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	246	2366	15.0	-36	True	NA	NA
PB.6055.3	chr19	+	4624	6	novel_in_catalog	ZNF225	novel	552	5	NA	NA	27	4	combination_of_known_junctions	FALSE	canonical	1	2394	junction_1	13490.915002326565	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	419	2539	25.0	-44	False	ATTAAA	-26
PB.6055.2	chr19	+	2976	5	full-splice_match	ZNF225	ENST00000262894.10	4482	5	22	1484	22	458	multi-exon	FALSE	canonical	1	21818	junction_1	3818.9481863466017	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	259	2379	25.0	-49	False	NA	NA
PB.6055.1	chr19	+	4465	5	full-splice_match	ZNF225	ENST00000262894.10	4482	5	21	-4	21	4	multi-exon	FALSE	canonical	1	21818	junction_1	3818.9481863466017	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	260	2380	25.0	-50	False	ATTAAA	-26
PB.9798.18	chr6	+	2561	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	-6	4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	40634.12015132384	NA	3	1	TRUE	NA	NA	NA	B	coding	265	798	146	943	20.0	-17	True	NA	NA
PB.1398.1	chr10	-	3424	16	novel_in_catalog	AGAP9	novel	2387	8	NA	NA	-29887	66	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_3	149.5972370511345	NA	1	NA	TRUE	NA	NA	NA	A	coding	670	2013	1048	3060	60.0	NA	False	GATAAA	-20
PB.9798.12	chr6	+	4841	5	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_4	43582.78285845799	NA	3	1	TRUE	NA	NA	NA	B	coding	327	984	695	1678	20.0	2	True	NA	NA
PB.9798.13	chr6	+	2808	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	5	14	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	43934.30496933904	NA	3	1	TRUE	NA	NA	NA	B	coding	327	984	197	1180	15.0	-54	False	NA	NA
PB.9798.10	chr6	+	4226	6	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	-4	-7	intron_retention	FALSE	canonical	0	0	junction_5	40726.9792074001	NA	4	1	TRUE	NA	NA	NA	B	coding	327	984	91	1074	25.0	-4	True	NA	NA
PB.9798.11	chr6	+	4442	1	novel_in_catalog	BTN2A2	novel	1790	8	NA	NA	1	-591	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	153	462	1930	2391	90.0	1	True	NA	NA
PB.9798.16	chr6	+	2396	6	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	18	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	38618.52857372999	NA	3	1	TRUE	NA	NA	NA	B	coding	211	636	170	805	75.0	0	True	NA	NA
PB.9798.17	chr6	+	3630	7	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	-8	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	38995.115352224995	NA	3	1	TRUE	NA	NA	NA	B	coding	327	984	148	1131	25.0	-19	True	NA	NA
PB.9798.14	chr6	+	2223	5	novel_not_in_catalog	BTN2A2	novel	1790	8	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	45322.15454043971	NA	8	1	TRUE	NA	NA	NA	B	coding	181	546	87	632	75.0	-6	True	NA	NA
PB.9798.15	chr6	+	4415	6	incomplete-splice_match	BTN2A2	ENST00000469230.5	1790	8	63	875	16	7	intron_retention	FALSE	canonical	1	32833	junction_1	26724.121616247743	NA	3	NA	TRUE	NA	NA	NA	B	coding	323	972	172	1143	25.0	-2	True	NA	NA
PB.8817.17	chr4	-	6001	25	novel_in_catalog	ANKRD17	novel	10784	34	NA	NA	1	1625	intron_retention	FALSE	canonical	1	38747	junction_24	124115.2857255828	NA	1	1	TRUE	NA	NA	NA	B	coding	1367	4104	87	4190	15.0	8	True	NA	NA
PB.10087.7	chr6	-	2367	17	incomplete-splice_match	CEP162	ENST00000403245.7	5156	27	-49	47441	-49	3090	3prime_fragment	FALSE	canonical	1	27984	junction_16	12146.182265428097	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2202	165	2366	75.0	-70	False	AGTAAA	-9
PB.8524.14	chr3	+	4143	26	novel_not_in_catalog	ECT2	novel	4087	24	NA	NA	-2	-290	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	137545.3468499753	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2754	444	3197	20.0	-2	True	ATTAAA	-18
PB.8524.15	chr3	+	4396	26	novel_in_catalog	ECT2	novel	4087	24	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	13538	junction_25	132636.05773855615	NA	3	NA	TRUE	NA	NA	NA	C	coding	958	2877	155	3031	25.0	0	True	AATAAA	-13
PB.8524.12	chr3	+	3944	24	novel_in_catalog	ECT2	novel	4087	24	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	1	15092	junction_11	107650.3673862786	NA	3	NA	TRUE	NA	NA	NA	C	coding	854	2565	150	2714	25.0	5	True	AATAAA	-13
PB.8524.13	chr3	+	4136	25	full-splice_match	ECT2	ENST00000392692.7	4158	25	20	2	-2	-1	multi-exon	FALSE	canonical	1	110454	junction_4	100965.64083554165	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	157	2901	20.0	-2	True	AATAAA	-18
PB.8817.11	chr4	-	4039	24	novel_in_catalog	ANKRD17	novel	10784	34	NA	NA	29	-49	intron_retention	FALSE	canonical	1	5122	junction_1	128962.73362886022	NA	0	NA	TRUE	NA	NA	NA	B	coding	1327	3981	59	4039	80.0	36	True	AAGAAA	-24
PB.8817.10	chr4	-	3407	24	novel_in_catalog	ANKRD17	novel	10784	34	NA	NA	32	-42	intron_retention	FALSE	canonical	1	38747	junction_23	109908.15111065844	NA	1	NA	TRUE	NA	NA	NA	B	coding	1117	3351	56	3406	75.0	39	False	AAGAAA	-31
PB.6316.3	chr2	-	3137	6	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	0	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	8510.626900528538	NA	0	NA	TRUE	NA	NA	NA	B	coding	206	621	441	1061	30.0	11	False	NA	NA
PB.6316.2	chr2	-	3006	7	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	-55	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	31147.157803276725	NA	0	NA	TRUE	NA	NA	NA	B	coding	237	714	56	769	5.0	226	False	NA	NA
PB.6316.7	chr2	-	2299	7	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	30774.991450942038	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	280	1125	45.0	2	True	NA	NA
PB.6316.6	chr2	-	2503	9	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	7766.496620098408	NA	0	NA	TRUE	NA	NA	NA	B	coding	206	621	708	1328	40.0	3	True	NA	NA
PB.8817.19	chr4	-	5250	24	novel_in_catalog	ANKRD17	novel	10784	34	NA	NA	-11	1618	intron_retention	FALSE	canonical	1	27271	junction_10	136982.20683554112	NA	0	NA	TRUE	NA	NA	NA	B	coding	1115	3348	99	3446	15.0	-4	True	NA	NA
PB.8817.18	chr4	-	5671	24	novel_in_catalog	ANKRD17	novel	10784	34	NA	NA	-40	1625	intron_retention	FALSE	canonical	1	48331	junction_1	115764.4077285296	NA	0	NA	TRUE	NA	NA	NA	B	coding	1229	3690	171	3860	15.0	2	True	NA	NA
PB.11622.2	chr9	-	2803	11	incomplete-splice_match	KIF27	ENST00000334204.6	4400	16	-55	43676	-55	-256	3prime_fragment	FALSE	canonical	1	416	junction_6	11539.283333032428	NA	2	NA	TRUE	NA	NA	NA	B	coding	855	2565	238	2802	65.0	9	True	NA	NA
PB.11083.1	chr8	-	2290	7	full-splice_match	TTI2	ENST00000360742.9	2242	7	-44	-4	32	4	multi-exon	FALSE	canonical	1	143617	junction_6	18803.827426587624	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	541	2067	50.0	-19	True	AATAAA	-23
PB.11083.2	chr8	-	1904	8	full-splice_match	TTI2	ENST00000431156.6	2363	8	465	-6	-17	4	multi-exon	FALSE	canonical	1	64099	junction_7	44721.5579900927	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	155	1681	50.0	-2	True	AATAAA	-23
PB.11083.4	chr8	-	1779	8	full-splice_match	TTI2	ENST00000431156.6	2363	8	459	125	-23	37	multi-exon	FALSE	canonical	1	64099	junction_7	44721.5579900927	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	161	1687	40.0	-8	True	AAAAAG	-14
PB.6126.1	chr19	+	2851	14	novel_not_in_catalog	NUCB1	novel	2668	13	NA	NA	-41	1320	intron_retention	FALSE	non_canonical	0	0	junction_13	726492.2161927075	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	106	1491	50.0	0	True	NA	NA
PB.6126.2	chr19	+	2275	13	full-splice_match	NUCB1	ENST00000405315.8	2668	13	286	107	-3	-3	multi-exon	FALSE	canonical	1	762477	junction_1	576783.4256738687	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	49	1434	35.0	0	True	AATACA	-9
PB.3131.8	chr13	-	1667	12	incomplete-splice_match	VWA8	ENST00000281496.6	3475	26	0	146262	0	-8	3prime_fragment	FALSE	canonical	1	65480	junction_11	24305.93499572746	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	106	1566	55.0	-12	True	AATAAA	-8
PB.6126.4	chr19	+	2233	14	novel_not_in_catalog	NUCB1	novel	2668	13	NA	NA	-3	-3	intron_retention	TRUE	non_canonical	0	0	junction_11	726492.2161927075	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	49	1392	35.0	0	True	AATACA	-9
PB.6126.5	chr19	+	2238	13	novel_not_in_catalog	NUCB1	novel	2668	13	NA	NA	1	-3	intron_retention	FALSE	canonical	1	1834	junction_2	740684.2055142279	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	45	1397	35.0	4	True	AATACA	-9
PB.6126.6	chr19	+	1568	14	novel_not_in_catalog	NUCB1	novel	2668	13	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	726492.2161927075	NA	5	1	TRUE	NA	NA	NA	C	coding	459	1380	38	1417	35.0	11	True	AATACA	-9
PB.3131.3	chr13	-	7005	45	full-splice_match	VWA8	ENST00000379310.7	7147	45	149	-7	149	7	multi-exon	TRUE	canonical	1	65480	junction_44	22830.321930175094	NA	0	NA	TRUE	NA	NA	NA	C	coding	1809	5430	209	5638	20.0	173	False	AATAAA	-31
PB.7594.1	chr22	-	2959	9	full-splice_match	ATP6V1E1	ENST00000253413.9	1402	9	36	-1593	-33	1593	multi-exon	FALSE	canonical	1	412338	junction_8	323715.01804625546	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	148	828	20.0	-36	True	AATACA	-21
PB.7594.2	chr22	-	2630	9	full-splice_match	ATP6V1E1	ENST00000253413.9	1402	9	40	-1268	-29	1268	multi-exon	FALSE	canonical	1	412338	junction_8	323715.01804625546	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	144	824	15.0	-32	True	NA	NA
PB.7594.3	chr22	-	1257	9	full-splice_match	ATP6V1E1	ENST00000253413.9	1402	9	71	74	0	-41	multi-exon	FALSE	canonical	1	412338	junction_8	323715.01804625546	NA	5	NA	TRUE	NA	NA	NA	C	coding	226	681	113	793	35.0	-1	True	TTTAAA	-5
PB.3131.7	chr13	-	3475	26	full-splice_match	VWA8	ENST00000281496.6	3475	26	0	0	0	0	multi-exon	FALSE	canonical	1	65480	junction_25	20370.512269493862	NA	0	NA	TRUE	NA	NA	NA	C	coding	1039	3120	106	3225	10.0	-12	True	AATAAA	-26
PB.3131.6	chr13	-	6667	45	full-splice_match	VWA8	ENST00000379310.7	7147	45	-54	534	-18	-534	multi-exon	FALSE	canonical	1	65480	junction_44	22830.321930175094	NA	0	NA	TRUE	NA	NA	NA	C	coding	1905	5718	124	5841	50.0	-30	False	AATAAA	-11
PB.3131.4	chr13	-	3556	17	novel_not_in_catalog	VWA8	novel	7147	45	NA	NA	-2991	8	any annotated donor/acceptor	FALSE	canonical	1	673	junction_14	31272.469314016344	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	164	2188	20.0	-4086	False	AATAAA	-32
PB.9002.10	chr4	-	2963	22	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-172	19	any annotated donor/acceptor	FALSE	canonical	1	925	junction_1	46834.77535073905	NA	0	NA	TRUE	NA	NA	NA	B	coding	735	2208	528	2735	5.0	-8	True	AATAAA	-36
PB.9002.12	chr4	-	2842	22	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-184	19	any annotated donor/acceptor	FALSE	canonical	1	5366	junction_13	46015.88278714505	NA	0	NA	TRUE	NA	NA	NA	B	coding	748	2247	540	2786	5.0	-20	True	AATAAA	-36
PB.5904.2	chr19	-	4445	29	full-splice_match	ANKRD27	ENST00000306065.8	4450	29	10	-5	-2	5	multi-exon	FALSE	canonical	1	168882	junction_7	49543.00986387937	NA	0	NA	TRUE	NA	NA	NA	C	coding	1050	3153	150	3302	15.0	-24	True	AGTAAA	-20
PB.9002.14	chr4	-	2785	22	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-599	19	any annotated donor/acceptor	FALSE	canonical	1	1354	junction_21	40109.49073250447	NA	0	NA	TRUE	NA	NA	NA	B	coding	739	2220	510	2729	5.0	-1	True	AATAAA	-36
PB.9002.15	chr4	-	2762	21	novel_in_catalog	INPP4B	novel	8831	27	NA	NA	-153	19	combination_of_known_junctions	FALSE	canonical	1	1767	junction_12	41035.18633499183	NA	1	NA	TRUE	NA	NA	NA	B	coding	476	1431	1276	2706	5.0	11	True	AATAAA	-36
PB.9002.18	chr4	-	2619	20	novel_in_catalog	INPP4B	novel	8831	27	NA	NA	-193	18	no_combination_of_known_junctions	FALSE	canonical	1	3606	junction_9	40276.93387589494	NA	0	NA	TRUE	NA	NA	NA	B	coding	671	2016	549	2564	5.0	-29	True	AATAAA	-35
PB.2643.1	chr12	+	1978	2	full-splice_match	HOXC8	ENST00000040584.5	1889	2	-136	47	-136	-47	multi-exon	FALSE	canonical	1	22732	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	242	729	316	1044	85.0	-19	True	NA	NA
PB.4034.1	chr15	-	4177	7	novel_in_catalog	GOLGA2P10	novel	1349	7	NA	NA	-6	1515	intron_retention	FALSE	canonical	1	37	junction_3	78.66525422460809	NA	4	NA	TRUE	NA	NA	NA	A	coding	129	390	2361	2750	15.0	NA	False	NA	NA
PB.283.3	chr1	-	2077	10	incomplete-splice_match	CLSPN	ENST00000318121.7	4169	25	-66	14920	-27	-4360	3prime_fragment	FALSE	canonical	1	116547	junction_1	28220.204818533828	NA	0	NA	TRUE	NA	NA	NA	B	coding	651	1953	125	2077	65.0	-28	True	NA	NA
PB.283.2	chr1	-	2101	11	novel_not_in_catalog	CLSPN	novel	4769	25	NA	NA	0	-2822	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	56494.332140844	NA	3	1	TRUE	NA	NA	NA	B	coding	570	1710	391	2100	70.0	-1	True	NA	NA
PB.283.1	chr1	-	2183	11	incomplete-splice_match	CLSPN	ENST00000318121.7	4169	25	-72	13382	-33	-2822	3prime_fragment	FALSE	canonical	1	108922	junction_1	31103.622825805996	NA	0	NA	TRUE	NA	NA	NA	B	coding	684	2052	131	2182	70.0	-34	False	NA	NA
PB.5904.4	chr19	-	4326	28	novel_in_catalog	ANKRD27	novel	4450	29	NA	NA	3	2	no_combination_of_known_junctions	FALSE	canonical	1	3524	junction_7	66271.02241050257	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	157	3186	10.0	-31	True	AGTAAA	-17
PB.2494.25	chr12	+	2795	11	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-3	-15986	any annotated donor/acceptor	FALSE	canonical	1	1944	junction_10	69355.4195506739	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	212	1774	35.0	-9	True	AGTAAA	-21
PB.2494.24	chr12	+	2062	11	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-22	-5461	combination_of_known_junctions	FALSE	canonical	1	971	junction_10	69544.97447378926	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1830	231	2060	30.0	-28	True	ATTAAA	-15
PB.2494.21	chr12	+	3890	24	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-26	-249	combination_of_known_junctions	FALSE	canonical	1	9953	junction_1	50216.73574309536	NA	0	NA	TRUE	NA	NA	NA	C	coding	1008	3027	235	3261	85.0	-32	True	NA	NA
PB.2494.20	chr12	+	4057	23	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-27	1	no_combination_of_known_junctions	FALSE	canonical	1	5968	junction_9	62082.81900371751	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	236	3178	30.0	-33	True	AATAAA	-15
PB.2494.23	chr12	+	2276	10	incomplete-splice_match	PLEKHA5	ENST00000536974.5	3139	22	-26	73585	-26	-19483	3prime_fragment	FALSE	canonical	1	9953	junction_1	55670.92887563979	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	235	1827	100.0	-32	True	NA	NA
PB.2494.22	chr12	+	3363	11	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-26	-15989	any annotated donor/acceptor	FALSE	canonical	1	62	junction_10	69722.6997670773	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	235	1962	25.0	-32	True	AGTAAA	-18
PB.11750.11	chr9	+	5672	2	full-splice_match	TRIM32	ENST00000373983.2	3688	2	7	-1991	-6	1991	multi-exon	FALSE	canonical	1	56470	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	653	1962	124	2085	10.0	0	True	NA	NA
PB.11538.7	chr9	+	2332	17	full-splice_match	MELK	ENST00000536860.5	2342	17	7	3	6	-1	multi-exon	FALSE	canonical	1	35393	junction_4	106996.90285863346	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	178	1989	10.0	-28	True	AATAAA	-15
PB.10752.1	chr7	+	2220	15	novel_in_catalog	LRWD1	novel	2215	15	NA	NA	8	-3	combination_of_known_junctions	TRUE	canonical	1	18052	junction_1	88405.21590762316	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	619	2106	35.0	-47	True	ATTAAA	-14
PB.6223.1	chr19	+	1182	2	full-splice_match	ZNF580	ENST00000325333.9	1261	2	79	0	-10	0	multi-exon	FALSE	canonical	1	98292	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	172	519	222	740	10.0	1	True	AATAAA	-14
PB.3137.2	chr13	+	3106	6	full-splice_match	DNAJC15	ENST00000379221.3	7853	6	395	4352	395	-4352	multi-exon	FALSE	canonical	1	789413	junction_1	155052.3704512769	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	30	482	55.0	8	True	NA	NA
PB.8280.5	chr3	+	4343	15	full-splice_match	ALCAM	ENST00000472644.6	4189	15	-109	-45	-109	6	multi-exon	FALSE	canonical	1	125743	junction_12	162493.09560567583	NA	34	1	TRUE	NA	NA	NA	C	coding	570	1713	176	1888	15.0	-11	True	AATAAA	-24
PB.9849.2	chr6	-	4460	20	novel_not_in_catalog	PPP1R10	novel	4525	20	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	6001	junction_9	161725.30892232718	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	553	1659	20.0	-1	True	AATAAA	-25
PB.7110.18	chr2	+	2984	13	full-splice_match	SEPT2	ENST00000391971.6	3315	13	28	303	-5	-300	multi-exon	FALSE	canonical	1	634146	junction_7	777001.6272450786	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	112	1197	65.0	-57	True	NA	NA
PB.639.12	chr1	+	3553	23	novel_not_in_catalog	ATP1A1	novel	654	5	NA	NA	411	0	any annotated donor/acceptor	FALSE	canonical	1	257	junction_1	1310510.5161313484	NA	6	NA	TRUE	NA	NA	NA	C	coding	992	2979	247	3225	10.0	-9736	False	AATAAA	-18
PB.9263.17	chr5	+	3039	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	-41	147	intron_retention	FALSE	canonical	1	29076	junction_1	118282.45771241735	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	209	2383	50.0	-11	True	AATAAA	-27
PB.639.10	chr1	+	1734	3	full-splice_match	ATP1A1	ENST00000488733.1	1728	3	-24	18	-15	-18	multi-exon	FALSE	canonical	1	1694424	junction_1	647025.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	268	585	100.0	1	True	NA	NA
PB.639.11	chr1	+	3668	23	full-splice_match	ATP1A1	ENST00000537345.5	3763	23	95	0	95	0	multi-exon	FALSE	canonical	1	12819	junction_1	1308674.956696741	NA	1	NA	TRUE	NA	NA	NA	C	coding	1023	3072	269	3340	10.0	631	False	AATAAA	-18
PB.1067.11	chr1	-	2353	1	novel_in_catalog	NUCKS1	novel	6496	7	NA	NA	54	-29418	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	21	False	AATAAA	-14
PB.9263.16	chr5	+	2827	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	-44	-62	intron_retention	FALSE	canonical	1	29077	junction_14	109884.2934421736	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	212	2380	35.0	-14	True	AATAAA	-29
PB.8489.14	chr3	-	2077	11	full-splice_match	CCNL1	ENST00000295926.7	2388	11	66	245	8	-2	multi-exon	FALSE	canonical	1	244647	junction_8	393951.2406875882	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	54	1634	35.0	-1	True	AATAAA	-22
PB.8489.15	chr3	-	3908	10	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	244647	junction_7	368593.6985462448	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	2566	3465	35.0	-9	True	AATAAA	-22
PB.8489.16	chr3	-	3772	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-4	intron_retention	FALSE	canonical	1	117545	junction_8	447060.23550235544	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	2432	3331	35.0	-1	True	AATAAA	-20
PB.8489.17	chr3	-	4665	9	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-3	intron_retention	FALSE	canonical	1	244647	junction_6	364404.1361159852	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	3324	4223	40.0	-1	True	AATAAA	-21
PB.8489.10	chr3	-	2823	11	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	52	intron_retention	FALSE	canonical	1	7034	junction_6	445975.61990477686	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	1363	2325	25.0	-1	True	AATAAA	-27
PB.8489.11	chr3	-	2249	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	1	117545	junction_8	422887.7414543725	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	845	1807	40.0	2	True	AATAAA	-21
PB.8489.12	chr3	-	2148	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	1	236802	junction_8	406205.7383842954	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	592	1707	35.0	-1	True	AATAAA	-20
PB.8489.13	chr3	-	2254	12	novel_not_in_catalog	CCNL1	novel	1998	11	NA	NA	-8	52	any annotated donor/acceptor	FALSE	canonical	1	1985	junction_8	440997.5263692361	NA	2	NA	TRUE	NA	NA	NA	C	coding	320	963	794	1756	25.0	1	True	AATAAA	-27
PB.20.1	chr1	-	699	4	full-splice_match	MRPL20	ENST00000344843.11	721	4	20	2	-3	-2	multi-exon	FALSE	canonical	1	1863035	junction_2	84403.07672512103	NA	1	NA	TRUE	NA	NA	NA	A	coding	149	450	77	526	20.0	-1	True	AATGAA	-16
PB.9263.14	chr5	+	2613	15	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	39	-334	intron_retention	FALSE	canonical	1	3193	junction_3	129749.1915555208	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	663	2438	40.0	-29	True	AATACA	-18
PB.4275.1	chr16	+	3212	1	intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-2	True	NA	NA
PB.6579.1	chr2	-	2974	2	antisense	novelGene_LINC01291_AS_novelGene_POLE4_AS_novelGene_LINC01293_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9869	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-22
PB.9002.9	chr4	-	2849	21	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-205	19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	41281.51427988077	NA	6	2	TRUE	NA	NA	NA	B	coding	476	1431	1363	2793	5.0	393	False	AATAAA	-36
PB.6579.3	chr2	-	2462	2	antisense	novelGene_LINC01291_AS_novelGene_POLE4_AS_novelGene_LINC01293_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6136	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	99	300	979	1278	0.0	2	True	NA	NA
PB.6579.4	chr2	-	6451	1	antisense	novelGene_POLE4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	160	483	5574	6056	90.0	-1	True	ATTAAA	-35
PB.4886.1	chr17	+	2153	6	full-splice_match	RNF135	ENST00000535306.6	2098	6	-59	4	17	-2	multi-exon	FALSE	canonical	1	7941	junction_3	64449.9465892719	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	74	934	20.0	-47	False	NA	NA
PB.8335.4	chr3	-	2427	14	novel_in_catalog	IQCB1	novel	2594	15	NA	NA	0	0	no_combination_of_known_junctions	TRUE	canonical	1	79570	junction_3	60363.7384681081	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	198	1334	15.0	-4	True	NA	NA
PB.4886.3	chr17	+	2066	5	full-splice_match	RNF135	ENST00000328381.9	2892	5	823	3	1	-1	multi-exon	FALSE	canonical	1	83803	junction_1	37546.989089506234	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	51	1349	15.0	-24	True	NA	NA
PB.4886.2	chr17	+	1907	4	full-splice_match	RNF135	ENST00000324689.8	1905	4	-1	-1	-1	1	multi-exon	FALSE	canonical	1	43705	junction_2	58516.48614611859	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	53	685	15.0	-26	True	NA	NA
PB.9263.11	chr5	+	3754	14	novel_in_catalog	SLC30A5	novel	4360	16	NA	NA	5	0	intron_retention	FALSE	canonical	1	29076	junction_1	128632.21044273714	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	261	2306	45.0	-63	True	ATTAAA	-17
PB.8335.6	chr3	-	2180	14	novel_in_catalog	IQCB1	novel	2594	15	NA	NA	2	-6	no_combination_of_known_junctions	FALSE	canonical	1	20863	junction_1	73053.2996838488	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	196	1620	40.0	-2	True	AATAAA	-20
PB.10061.11	chr6	+	2905	12	full-splice_match	MTO1	ENST00000498286.5	10857	12	170	7782	1	2	multi-exon	FALSE	canonical	1	157893	junction_1	33263.251669121375	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	108	2186	35.0	11	True	CATAAA	-12
PB.6998.14	chr2	-	5263	4	novel_not_in_catalog	IGFBP5	novel	6215	4	NA	NA	3815	-232	any annotated donor/acceptor	FALSE	canonical	1	1122	junction_3	672298.6712228428	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	298	849	80.0	-1	True	AATAAA	-26
PB.8512.3	chr3	+	2002	4	novel_in_catalog	GPR160	novel	2039	4	NA	NA	4	-13	combination_of_known_junctions	FALSE	canonical	1	21076	junction_1	121310.23236955552	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	585	1601	50.0	30	True	ATTAAA	-16
PB.8335.7	chr3	-	1932	12	full-splice_match	IQCB1	ENST00000349820.10	1919	12	-23	10	4	-10	multi-exon	FALSE	canonical	1	17630	junction_5	70052.83224234088	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	194	1591	40.0	0	True	AATAAA	-16
PB.6308.2	chr2	+	3965	4	full-splice_match	KLF11	ENST00000535335.1	4033	4	67	1	67	-1	multi-exon	FALSE	canonical	1	4946	junction_1	56221.11052502135	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	150	1637	10.0	-1615	False	TATAAA	-16
PB.10061.12	chr6	+	2885	13	novel_in_catalog	MTO1	novel	2837	13	NA	NA	-4	1	intron_retention	FALSE	canonical	1	12287	junction_4	103710.5482595939	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	646	1353	30.0	-322	False	ATTAAA	-16
PB.8512.2	chr3	+	1797	4	full-splice_match	GPR160	ENST00000355897.9	2039	4	250	-8	-20	8	multi-exon	FALSE	canonical	1	178022	junction_1	58874.85304157172	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	359	1375	45.0	1	True	ATTAAA	-37
PB.3482.1	chr14	+	1537	16	full-splice_match	SLC38A6	ENST00000267488.8	1688	16	65	86	1	80	multi-exon	TRUE	canonical	1	67571	junction_6	26405.447576000086	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	52	1422	45.0	-18	True	AATAAA	-16
PB.3482.2	chr14	+	1608	17	novel_not_in_catalog	AL160236.2	novel	200	2	NA	NA	101523	101145	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	39606.75908679445	NA	0	NA	TRUE	NA	NA	NA	A	coding	459	1380	42	1421	10.0	-8	True	NA	NA
PB.3482.3	chr14	+	2402	4	full-splice_match	SLC38A6	ENST00000554304.5	571	4	14	-1845	10	1845	multi-exon	FALSE	canonical	1	860	junction_3	60804.01291764294	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	32	877	65.0	2	True	NA	NA
PB.8512.1	chr3	+	1561	4	full-splice_match	GPR160	ENST00000355897.9	2039	4	159	319	-50	-319	multi-exon	FALSE	canonical	1	178022	junction_1	58874.85304157172	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	450	1466	15.0	-817	False	AATAAA	-16
PB.8335.1	chr3	-	3468	15	novel_not_in_catalog	IQCB1	novel	2594	15	NA	NA	2	13215	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	77180.85296941681	NA	2	NA	TRUE	NA	NA	NA	C	coding	597	1794	127	1920	100.0	67	True	NA	NA
PB.8335.2	chr3	-	2938	15	full-splice_match	IQCB1	ENST00000310864.10	2594	15	21	-365	3	365	multi-exon	FALSE	canonical	1	80216	junction_7	63253.85840502103	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	195	1991	30.0	-1	True	AGTAAA	-18
PB.3908.13	chr15	-	6593	52	incomplete-splice_match	VPS13C	ENST00000395898.3	11012	80	14	54966	13	-16067	3prime_fragment	FALSE	canonical	1	96861	junction_2	38964.6924477614	NA	1	NA	TRUE	NA	NA	NA	C	coding	2177	6531	61	6591	65.0	-33	True	NA	NA
PB.3503.1	chr14	+	2641	1	novel_in_catalog	AL139022.1	novel	486	3	NA	NA	-2802	-2109	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	108	327	212	538	100.0	-2802	False	TATAAA	-15
PB.8335.3	chr3	-	2551	15	full-splice_match	IQCB1	ENST00000310864.10	2594	15	43	0	-2	0	multi-exon	FALSE	canonical	1	80216	junction_7	63253.85840502103	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	173	1969	15.0	21	True	NA	NA
PB.3908.17	chr15	-	4979	1	novel_in_catalog	VPS13C	novel	13403	85	NA	NA	46	-71710	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	197	594	28	621	95.0	0	True	NA	NA
PB.3908.16	chr15	-	1607	17	incomplete-splice_match	VPS13C	ENST00000395898.3	11012	80	-13	117185	12	-1216	3prime_fragment	FALSE	canonical	1	141426	junction_16	36210.46173392954	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1518	88	1605	60.0	6	True	AAAACA	-11
PB.3908.15	chr15	-	3125	29	incomplete-splice_match	VPS13C	ENST00000395898.3	11012	80	1	96988	0	-12872	3prime_fragment	FALSE	canonical	1	137715	junction_3	38645.634037933414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1017	3051	74	3124	75.0	441	False	NA	NA
PB.5086.1	chr17	-	3298	15	novel_not_in_catalog	TTLL6	novel	2548	9	NA	NA	-988	0	any annotated donor/acceptor	FALSE	canonical	1	665	junction_14	2528.329012794572	NA	1	1	TRUE	NA	NA	NA	A	coding	738	2217	343	2559	25.0	-1	True	AATAAA	-23
PB.1101.3	chr1	+	3474	11	full-splice_match	HHAT	ENST00000537898.5	3446	11	-27	-1	-27	1	multi-exon	FALSE	canonical	1	3874	junction_4	16286.762838575383	NA	8	1	TRUE	NA	NA	NA	C	coding	428	1287	270	1556	35.0	-424	False	AATAAA	-23
PB.6372.9	chr2	-	3014	17	novel_not_in_catalog	SLC5A6	novel	2307	3	NA	NA	-23	0	intron_retention	FALSE	canonical	1	10696	junction_9	167506.01901161968	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	413	2167	15.0	34	True	AATAAA	-19
PB.6372.8	chr2	-	2986	17	novel_in_catalog	SLC5A6	novel	2307	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	78169	junction_16	107214.91638029474	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	292	2139	15.0	2	True	AATAAA	-19
PB.6372.5	chr2	-	3354	15	novel_in_catalog	SLC5A6	novel	2307	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	9764	junction_11	149753.88462892734	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	1395	2507	15.0	0	True	AATAAA	-19
PB.6372.4	chr2	-	3525	16	novel_in_catalog	SLC5A6	novel	2307	3	NA	NA	25	-2	intron_retention	FALSE	canonical	1	78169	junction_15	106137.3621237854	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	1568	2680	20.0	32	True	AATAAA	-17
PB.6372.7	chr2	-	3120	18	novel_not_in_catalog	SLC5A6	novel	2307	3	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_17	184893.74579478797	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	1389	2273	15.0	-12	True	AATAAA	-19
PB.6372.6	chr2	-	3215	17	full-splice_match	SLC5A6	ENST00000310574.7	3231	17	14	2	-10	0	multi-exon	FALSE	canonical	1	93182	junction_16	104371.95829969131	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	521	2368	15.0	-10	True	AATAAA	-19
PB.6372.1	chr2	-	4031	14	novel_in_catalog	SLC5A6	novel	2307	3	NA	NA	20	0	intron_retention	FALSE	canonical	1	35052	junction_13	121208.25139252334	NA	14	1	TRUE	NA	NA	NA	C	coding	225	678	331	1008	15.0	19	True	AATAAA	-19
PB.6372.3	chr2	-	3667	15	novel_in_catalog	SLC5A6	novel	2307	3	NA	NA	-12	0	intron_retention	FALSE	canonical	1	106298	junction_14	101188.41125600948	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	1472	2353	15.0	-5	True	AATAAA	-19
PB.6372.2	chr2	-	3782	15	novel_in_catalog	SLC5A6	novel	2307	3	NA	NA	-11	0	intron_retention	FALSE	canonical	1	106298	junction_14	103790.65710118084	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	318	995	15.0	-4	True	AATAAA	-19
PB.9409.4	chr5	+	1389	10	incomplete-splice_match	DMXL1	ENST00000503802.5	1835	13	188	4371	4	-12	internal_fragment	FALSE	canonical	1	136300	junction_5	25842.87534073063	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1212	178	1389	25.0	-6	True	AATAAA	-19
PB.2389.9	chr12	+	3978	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	-8	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	173594.222211914	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	282	1442	70.0	-51	True	NA	NA
PB.2389.8	chr12	+	3953	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	-12	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	180227.29216980256	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	197	1357	30.0	-55	True	AATAAA	-10
PB.2389.7	chr12	+	3820	7	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	-15	-25	no_combination_of_known_junctions	FALSE	canonical	1	7163	junction_5	187438.64356162585	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	267	989	70.0	-1090	False	NA	NA
PB.2389.6	chr12	+	3870	7	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	-18	0	no_combination_of_known_junctions	FALSE	canonical	1	7163	junction_5	180223.3483153612	NA	2	NA	TRUE	NA	NA	NA	C	coding	240	723	292	1014	10.0	-1093	False	AATAAA	-20
PB.2389.5	chr12	+	3637	6	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	-19	-25	no_combination_of_known_junctions	TRUE	canonical	1	6681	junction_4	182105.1102243976	NA	2	1	TRUE	NA	NA	NA	C	coding	261	786	271	1056	70.0	-1094	False	NA	NA
PB.2389.4	chr12	+	4134	9	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	2521	junction_1	189841.7077080271	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	368	1528	10.0	-1094	False	AATAAA	-20
PB.2389.3	chr12	+	4215	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	-20	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	194152.7079890981	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	456	1616	25.0	-1095	False	AATAAA	-13
PB.2389.2	chr12	+	4150	9	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	-20	-7	no_combination_of_known_junctions	FALSE	canonical	1	3790	junction_1	189571.77943620557	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	391	1551	25.0	-1095	False	AATAAA	-13
PB.2389.1	chr12	+	3852	8	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	27	-25	no_combination_of_known_junctions	FALSE	canonical	1	109887	junction_1	126081.05713211252	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	111	1271	70.0	-912	False	NA	NA
PB.299.4	chr1	+	2269	11	full-splice_match	CDCA8	ENST00000327331.2	2303	11	37	-3	37	3	multi-exon	FALSE	canonical	1	87221	junction_1	102749.21424147244	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	77	919	20.0	2	True	AATAAA	-24
PB.299.2	chr1	+	2141	11	full-splice_match	CDCA8	ENST00000327331.2	2303	11	7	155	7	-155	multi-exon	FALSE	canonical	1	87221	junction_1	102749.21424147244	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	107	949	30.0	-8	True	NA	NA
PB.299.3	chr1	+	2368	10	full-splice_match	CDCA8	ENST00000373055.5	2469	10	99	2	36	-2	multi-exon	FALSE	canonical	1	284764	junction_8	52892.4676156174	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	175	1017	20.0	1	True	AATAAA	-25
PB.299.1	chr1	+	2269	10	full-splice_match	CDCA8	ENST00000373055.5	2469	10	60	140	-3	-134	multi-exon	TRUE	canonical	1	284764	junction_8	52892.4676156174	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	214	1056	20.0	-18	True	AGTAAA	-20
PB.1583.32	chr10	-	3482	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	57	-306	any annotated donor/acceptor	FALSE	canonical	1	12156	junction_15	32555.29640773611	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	287	2557	60.0	0	True	AATAAA	-13
PB.1583.33	chr10	-	2861	15	full-splice_match	LOXL4	ENST00000260702.3	3653	15	56	736	56	-736	multi-exon	FALSE	canonical	1	35845	junction_14	26739.685669030805	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	96	2366	15.0	-1	True	NA	NA
PB.1583.31	chr10	-	3301	15	full-splice_match	LOXL4	ENST00000260702.3	3653	15	56	296	56	-296	multi-exon	FALSE	canonical	1	35845	junction_14	26739.685669030805	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	96	2366	40.0	-1	True	AATAAA	-23
PB.1583.34	chr10	-	3120	2	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	1047	-16059	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	107	321	2800	3120	95.0	990	False	NA	NA
PB.1583.35	chr10	-	3802	3	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-16059	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	6078.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	321	3482	3802	95.0	-1	True	NA	NA
PB.238.20	chr1	-	1813	5	novel_not_in_catalog	LAPTM5	novel	2223	8	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1632175.6366752477	NA	1	1	TRUE	NA	NA	NA	C	coding	126	381	74	454	5.0	1	True	AATAAA	-16
PB.9137.12	chr5	+	2786	13	novel_in_catalog	MTRR	novel	711	4	NA	NA	1	1084	combination_of_known_junctions	FALSE	canonical	1	89262	junction_1	76175.5971143136	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	1521	1853	20.0	42	True	AATAAA	-16
PB.9137.11	chr5	+	3056	14	novel_in_catalog	MTRR	novel	711	4	NA	NA	1	1	intron_retention	FALSE	canonical	1	89262	junction_1	73202.14997351896	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	1521	1994	30.0	42	True	AATAAA	-26
PB.9137.10	chr5	+	3366	16	novel_in_catalog	MTRR	novel	711	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	22384	junction_9	97310.59032292197	NA	2	NA	TRUE	NA	NA	NA	C	coding	453	1362	57	1418	30.0	37	True	AATAAA	-25
PB.278.11	chr1	+	5787	27	novel_not_in_catalog	ZMYM4	novel	6994	30	NA	NA	-31	-492	any annotated donor/acceptor	FALSE	canonical	1	3826	junction_1	104878.14756880012	NA	0	NA	TRUE	NA	NA	NA	C	coding	1224	3675	338	4012	35.0	-3	True	AATAAA	-16
PB.278.10	chr1	+	7135	30	full-splice_match	ZMYM4	ENST00000314607.10	6994	30	-144	3	-144	-3	multi-exon	FALSE	canonical	1	61165	junction_1	89059.63306310061	NA	2	NA	TRUE	NA	NA	NA	C	coding	1548	4647	225	4871	10.0	0	True	AATAAA	-17
PB.278.13	chr1	+	5295	31	novel_not_in_catalog	ZMYM4	novel	6994	30	NA	NA	0	-1765	any annotated donor/acceptor	FALSE	canonical	1	1427	junction_1	101136.73908021202	NA	2	1	TRUE	NA	NA	NA	C	coding	1516	4551	243	4793	50.0	0	True	AATAAA	-16
PB.278.12	chr1	+	7050	31	novel_in_catalog	ZMYM4	novel	6994	30	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	1	56092	junction_1	96567.21969371042	NA	0	NA	TRUE	NA	NA	NA	C	coding	1516	4551	240	4790	15.0	-1	True	AATAAA	-13
PB.10158.12	chr6	+	2022	9	full-splice_match	AMD1	ENST00000368885.7	3438	9	15	1401	0	251	multi-exon	FALSE	canonical	1	272137	junction_2	444856.59972147207	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	322	1326	30.0	0	True	AATAAA	-13
PB.9540.6	chr5	-	3498	9	full-splice_match	NR3C1	ENST00000394464.6	6795	9	-6	3303	-6	-72	multi-exon	FALSE	canonical	1	185341	junction_8	83664.47375790695	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	510	2843	35.0	-21	True	AATAAA	-16
PB.7386.14	chr20	+	2486	15	full-splice_match	NELFCD	ENST00000602795.5	2305	15	75	-256	8	256	multi-exon	FALSE	canonical	1	483042	junction_1	243784.11675107558	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	1	1773	10.0	18	True	AATACA	-41
PB.6990.122	chr2	-	7845	44	full-splice_match	FN1	ENST00000356005.8	7846	44	0	1	0	-1	multi-exon	FALSE	canonical	1	3539696	junction_13	2288371.24175014	NA	0	NA	TRUE	NA	NA	NA	C	coding	2296	6891	267	7157	35.0	-1	True	AATAAA	-13
PB.6990.121	chr2	-	7759	45	full-splice_match	FN1	ENST00000432072.6	7759	45	-1	1	0	0	multi-exon	FALSE	canonical	1	1194474	junction_7	3026100.8436134984	NA	0	NA	TRUE	NA	NA	NA	C	coding	2267	6804	267	7070	35.0	-1	True	AATAAA	-14
PB.11768.4	chr9	+	2513	8	novel_in_catalog	MRRF	novel	1841	6	NA	NA	-13	0	intron_retention	FALSE	canonical	1	80395	junction_1	35972.75906197094	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	94	570	20.0	-20	True	AATAAA	-23
PB.3371.1	chr14	-	2502	4	novel_not_in_catalog	AL139353.1	novel	3860	25	NA	NA	-23	-18525	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	72017.37515504312	NA	1	NA	TRUE	NA	NA	NA	B	coding	109	330	503	832	20.0	8	True	AATAAA	-24
PB.11646.39	chr9	-	4271	34	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-2	1	intron_retention	FALSE	canonical	1	10641	junction_12	376609.51804461604	NA	0	NA	TRUE	NA	NA	NA	C	coding	1237	3714	95	3808	40.0	-3	True	AATAAA	-13
PB.7487.4	chr21	-	4046	19	novel_not_in_catalog	SCAF4	novel	4193	20	NA	NA	-47	-5	any annotated donor/acceptor	FALSE	canonical	1	5234	junction_13	118490.14127250326	NA	1	NA	TRUE	NA	NA	NA	C	coding	1084	3255	431	3685	35.0	-5	True	AATAAA	-14
PB.7487.7	chr21	-	3954	19	novel_in_catalog	SCAF4	novel	4193	20	NA	NA	-10	-6	no_combination_of_known_junctions	FALSE	canonical	1	5234	junction_13	105072.09659362589	NA	2	NA	TRUE	NA	NA	NA	C	coding	1066	3201	394	3594	35.0	32	True	AATAAA	-13
PB.11538.26	chr9	+	2145	15	novel_in_catalog	MELK	novel	2485	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	10533	junction_1	117709.25350419697	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	219	1802	10.0	-2	True	AATAAA	-15
PB.3371.2	chr14	-	2895	3	full-splice_match	DTD2	ENST00000549850.1	823	3	51	-2123	-12	-3	multi-exon	FALSE	canonical	1	127482	junction_2	20927.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	109	330	476	805	35.0	-12	True	AATAAA	-17
PB.7086.1	chr2	+	1693	1	novel_in_catalog	ACKR3	novel	713	2	NA	NA	285	-9479	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	101	False	NA	NA
PB.1293.2	chr10	+	3086	4	incomplete-splice_match	ECHDC3	ENST00000379215.8	1649	5	11	6167	11	2173	3prime_fragment	FALSE	canonical	1	117237	junction_1	56540.7261420179	NA	2	NA	TRUE	NA	NA	NA	C	coding	184	555	246	800	5.0	-54	True	AATAAA	-18
PB.3371.5	chr14	-	2663	3	full-splice_match	DTD2	ENST00000310850.8	2717	3	50	4	28	-4	multi-exon	FALSE	canonical	1	21576	junction_2	73880.5	NA	2	1	TRUE	NA	NA	NA	C	coding	168	507	68	574	35.0	45	False	AATAAA	-16
PB.1293.1	chr10	+	1644	5	full-splice_match	ECHDC3	ENST00000379215.8	1649	5	2	3	2	-3	multi-exon	FALSE	canonical	1	117237	junction_1	50723.855938305795	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	210	1121	20.0	-63	True	AATAAA	-15
PB.238.22	chr1	-	3790	1	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	-1379	-2130	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	9133	False	NA	NA
PB.6286.2	chr2	-	2101	5	full-splice_match	TMEM18	ENST00000281017.7	2762	5	20	641	-13	-1	multi-exon	FALSE	canonical	1	361630	junction_4	123078.03995103066	NA	0	NA	TRUE	NA	NA	NA	A	coding	140	423	75	497	25.0	-14	True	NA	NA
PB.9450.3	chr5	-	1882	9	novel_not_in_catalog	VDAC1	novel	1807	9	NA	NA	-65877	-1	any annotated donor/acceptor	FALSE	canonical	1	2507	junction_8	335597.65704029804	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	176	1027	5.0	-5	True	AATAAA	-14
PB.9450.2	chr5	-	1776	9	full-splice_match	VDAC1	ENST00000395047.6	1873	9	104	-7	4	7	multi-exon	FALSE	canonical	1	3339	junction_2	352352.69803777576	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	99	950	65.0	0	True	NA	NA
PB.746.20	chr1	-	2377	10	full-splice_match	PI4KB	ENST00000529142.5	2603	10	227	-1	-11	0	multi-exon	FALSE	canonical	1	4807	junction_9	193108.453719665	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	203	1657	15.0	-31	True	AATAAA	-15
PB.7487.3	chr21	-	4157	20	novel_not_in_catalog	SCAF4	novel	4193	20	NA	NA	-47	-5	any annotated donor/acceptor	TRUE	canonical	1	14446	junction_9	103322.70149619064	NA	0	NA	TRUE	NA	NA	NA	C	coding	1121	3366	431	3796	35.0	-5	True	AATAAA	-14
PB.9450.5	chr5	-	1767	8	novel_in_catalog	VDAC1	novel	1807	9	NA	NA	-11	-1	no_combination_of_known_junctions	FALSE	canonical	1	3339	junction_2	335236.2440115621	NA	2	2	TRUE	NA	NA	NA	C	coding	251	756	157	912	5.0	-15	True	AATAAA	-14
PB.9450.4	chr5	-	1850	9	full-splice_match	VDAC1	ENST00000265333.7	1953	9	102	1	102	-1	multi-exon	FALSE	canonical	1	3339	junction_2	331410.901763864	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	144	995	5.0	325	False	AATAAA	-14
PB.10408.10	chr7	+	1874	8	novel_in_catalog	TMEM106B	novel	2126	8	NA	NA	-2	-317	combination_of_known_junctions	FALSE	canonical	1	22861	junction_1	174489.34164291984	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	253	1077	50.0	4	True	AATAAA	-19
PB.6208.2	chr19	+	5919	15	novel_in_catalog	LENG8	novel	2825	16	NA	NA	-11	2	intron_retention	FALSE	canonical	1	659181	junction_1	280495.4909564829	NA	1	NA	TRUE	NA	NA	NA	B	coding	874	2625	184	2808	5.0	-9459	False	ATTAAA	-17
PB.3371.6	chr14	-	2277	2	incomplete-splice_match	DTD2	ENST00000549850.1	823	3	47	3319	-16	-3319	3prime_fragment	FALSE	canonical	1	127482	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-16	True	NA	NA
PB.1337.1	chr10	+	1632	12	full-splice_match	PDSS1	ENST00000376215.9	1626	12	-9	3	-9	-3	multi-exon	FALSE	canonical	1	39029	junction_2	37415.54292267249	NA	0	NA	TRUE	NA	NA	NA	A	coding	415	1248	63	1310	25.0	-9550	False	AATAAA	-19
PB.5281.1	chr17	-	2677	2	full-splice_match	TNRC6C-AS1	ENST00000589217.1	3192	2	514	1	514	-1	multi-exon	FALSE	canonical	1	47000	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	106	321	1604	1924	20.0	NA	False	AATAAA	-20
PB.7941.4	chr3	+	2378	12	full-splice_match	TSEN2	ENST00000284995.10	2381	12	-2	5	-2	5	multi-exon	FALSE	canonical	1	16139	junction_1	27076.306503736756	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	390	1787	50.0	29	True	AATAAA	-19
PB.7941.2	chr3	+	2033	12	novel_in_catalog	TSEN2	novel	1239	9	NA	NA	0	5	intron_retention	FALSE	canonical	1	23206	junction_1	25575.584820470693	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	45	1442	50.0	11	True	AATAAA	-19
PB.7941.3	chr3	+	3725	11	novel_in_catalog	TSEN2	novel	1239	9	NA	NA	4	5	intron_retention	FALSE	canonical	1	23206	junction_1	26819.588322716663	NA	2	NA	TRUE	NA	NA	NA	C	coding	428	1287	41	1327	50.0	15	True	AATAAA	-19
PB.7941.1	chr3	+	1989	13	novel_in_catalog	TSEN2	novel	1239	9	NA	NA	13	0	intron_retention	FALSE	canonical	1	22476	junction_12	29421.560852898907	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	80	1477	25.0	-24	False	AATAAA	-13
PB.9618.1	chr5	-	5952	20	novel_not_in_catalog	STK10	novel	6060	19	NA	NA	163	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	142171.66843602725	NA	2	NA	TRUE	NA	NA	NA	C	coding	1007	3024	182	3205	10.0	-28	True	AATAAA	-22
PB.7112.14	chr2	+	6032	14	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	0	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	43856.47032451932	NA	3	NA	TRUE	NA	NA	NA	C	coding	795	2388	117	2504	25.0	12	True	AATAAA	-21
PB.9618.3	chr5	-	5779	19	full-splice_match	STK10	ENST00000176763.9	6060	19	279	2	279	-2	multi-exon	FALSE	canonical	1	286977	junction_15	73873.18298615656	NA	1	NA	TRUE	NA	NA	NA	C	coding	968	2907	66	2972	5.0	298	False	AATAAA	-17
PB.9618.2	chr5	-	4779	13	novel_not_in_catalog	STK10	novel	6060	19	NA	NA	195	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	137542.9250970149	NA	4	2	TRUE	NA	NA	NA	C	coding	551	1656	316	1971	5.0	4	True	AATAAA	-18
PB.9618.5	chr5	-	4486	19	full-splice_match	STK10	ENST00000176763.9	6060	19	29	1545	29	-507	multi-exon	FALSE	canonical	1	286977	junction_15	73873.18298615656	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	316	3222	25.0	-26	True	AATAAA	-20
PB.9618.4	chr5	-	4935	19	full-splice_match	STK10	ENST00000176763.9	6060	19	87	1038	87	0	multi-exon	FALSE	canonical	1	286977	junction_15	73873.18298615656	NA	1	NA	TRUE	NA	NA	NA	C	coding	968	2907	258	3164	100.0	106	False	NA	NA
PB.3849.9	chr15	-	3000	15	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_12	90934.84061322174	NA	3	1	TRUE	NA	NA	NA	B	coding	423	1272	620	1891	20.0	-2	True	ATTAAA	-17
PB.3849.8	chr15	-	3297	15	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_12	83876.0148022189	NA	3	1	TRUE	NA	NA	NA	B	coding	212	639	1550	2188	20.0	43	False	ATTAAA	-17
PB.3849.7	chr15	-	3020	16	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_13	81728.13189169728	NA	2	1	TRUE	NA	NA	NA	B	coding	440	1323	588	1910	20.0	30	False	ATTAAA	-18
PB.3849.6	chr15	-	2951	15	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	-12	2	intron_retention	FALSE	canonical	0	0	junction_12	80688.49059851303	NA	2	1	TRUE	NA	NA	NA	B	coding	416	1251	587	1837	15.0	31	False	ATTAAA	-22
PB.3849.5	chr15	-	4439	14	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	0	-801	intron_retention	FALSE	canonical	0	0	junction_11	91123.48220243905	NA	4	1	TRUE	NA	NA	NA	B	coding	399	1200	565	1764	5.0	-22	True	CATAAA	-18
PB.3849.3	chr15	-	4482	15	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	-11	-795	intron_retention	FALSE	canonical	0	0	junction_12	80688.49059851303	NA	3	1	TRUE	NA	NA	NA	B	coding	416	1251	551	1801	10.0	-8	True	CATAAA	-24
PB.7112.16	chr2	+	6385	9	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	51085.59952407699	NA	3	1	TRUE	NA	NA	NA	C	coding	568	1707	365	2071	20.0	-1	True	AATAAA	-28
PB.3849.1	chr15	-	5379	16	novel_not_in_catalog	MYEF2	novel	10360	17	NA	NA	3	9	intron_retention	FALSE	canonical	0	0	junction_13	81728.13189169728	NA	2	1	TRUE	NA	NA	NA	B	coding	440	1323	572	1894	35.0	-29	True	NA	NA
PB.7903.4	chr3	-	2885	10	novel_in_catalog	CRBN	novel	2223	12	NA	NA	0	14	intron_retention	FALSE	canonical	1	252690	junction_4	83796.04006922971	NA	3	NA	TRUE	NA	NA	NA	C	coding	282	849	18	866	55.0	-14	True	AGTAAA	-34
PB.5851.2	chr19	-	1761	3	incomplete-splice_match	COPE	ENST00000593827.1	601	6	-10	9648	-7	1016	3prime_fragment	FALSE	canonical	1	1949518	junction_2	205217.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	345	716	95.0	-1	True	NA	NA
PB.146.3	chr1	-	6040	34	novel_in_catalog	EIF4G3	novel	5567	33	NA	NA	-6	-182	combination_of_known_junctions	FALSE	canonical	1	92054	junction_33	106254.73205032911	NA	1	NA	TRUE	NA	NA	NA	B	coding	1585	4758	629	5386	65.0	2	True	NA	NA
PB.5851.1	chr19	-	1130	10	full-splice_match	COPE	ENST00000262812.8	1141	10	10	1	-7	-1	multi-exon	TRUE	canonical	1	1632653	junction_3	528578.9613791087	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	40	966	15.0	-1	True	AATAAA	-28
PB.11307.14	chr8	-	3461	14	full-splice_match	RAD21	ENST00000297338.6	3749	14	51	237	51	-237	multi-exon	FALSE	canonical	1	430119	junction_13	466275.78548679256	NA	3	NA	TRUE	NA	NA	NA	C	coding	631	1896	238	2133	30.0	-40	True	NA	NA
PB.7112.11	chr2	+	2199	3	full-splice_match	FARP2	ENST00000479427.5	839	3	-13	-1347	-3	1347	multi-exon	FALSE	canonical	1	15653	junction_2	29350.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	1395	1997	75.0	1	True	NA	NA
PB.7112.12	chr2	+	4006	27	full-splice_match	FARP2	ENST00000264042.7	4051	27	44	1	-2	0	multi-exon	FALSE	canonical	1	42779	junction_19	44200.39623386615	NA	3	NA	TRUE	NA	NA	NA	C	coding	1054	3165	127	3291	10.0	2	True	AATAAA	-17
PB.8459.10	chr3	+	2151	11	incomplete-splice_match	HPS3	ENST00000296051.6	4665	17	68	13480	13	6117	3prime_fragment	FALSE	canonical	1	157291	junction_1	40268.210044773536	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2079	73	2151	60.0	0	True	NA	NA
PB.11538.5	chr9	+	2267	16	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	4918	junction_3	131340.68871118687	NA	13	2	TRUE	NA	NA	NA	C	coding	575	1728	196	1923	10.0	-33	True	AATAAA	-16
PB.5793.1	chr19	-	3166	9	novel_not_in_catalog	BRD4	novel	7169	20	NA	NA	1	-1321	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	131715.27409790977	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	253	1629	15.0	-15	True	AATAAA	-18
PB.7037.29	chr2	+	1402	8	incomplete-splice_match	ACSL3	ENST00000392066.7	3147	16	94	19391	10	1478	3prime_fragment	FALSE	canonical	1	314472	junction_2	197430.15257243637	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1047	356	1402	20.0	0	True	NA	NA
PB.5793.7	chr19	-	1708	9	full-splice_match	BRD4	ENST00000594841.5	1821	9	4	109	4	0	multi-exon	FALSE	canonical	1	23803	junction_8	200045.39111021152	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1530	177	1706	70.0	7	True	NA	NA
PB.5793.6	chr19	-	1829	10	novel_in_catalog	BRD4	novel	7169	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	23803	junction_9	264616.9975072988	NA	5	NA	TRUE	NA	NA	NA	C	coding	387	1161	667	1827	70.0	14	True	NA	NA
PB.5793.5	chr19	-	3266	7	incomplete-splice_match	BRD4	ENST00000371835.8	4624	12	15965	7	-86	-7	5prime_fragment	FALSE	canonical	1	153672	junction_1	188920.68579910873	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	63	1040	25.0	8513	False	AATAAA	-16
PB.9409.2	chr5	+	1952	12	incomplete-splice_match	DMXL1	ENST00000503802.5	1835	13	175	5	-9	-5	5prime_fragment	FALSE	canonical	1	136300	junction_5	23905.50793650868	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1761	191	1951	40.0	-19	True	AATAAA	-14
PB.7057.36	chr2	+	3592	29	novel_in_catalog	SP100	novel	3882	25	NA	NA	-1	-227	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	276852.1419593929	NA	1	NA	TRUE	NA	NA	NA	C	coding	865	2598	78	2675	60.0	0	True	NA	NA
PB.7057.37	chr2	+	2190	15	novel_in_catalog	SP100	novel	3882	25	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	9323	junction_6	206343.19415885414	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	86	796	30.0	-8	True	NA	NA
PB.7057.34	chr2	+	2040	15	novel_in_catalog	SP100	novel	3882	25	NA	NA	-15	11	combination_of_known_junctions	FALSE	canonical	1	9323	junction_6	206343.19415885414	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	92	802	25.0	-14	True	AATAAA	-28
PB.7057.35	chr2	+	1787	19	incomplete-splice_match	SP100	ENST00000409112.5	2198	23	-60	9635	-15	-11	3prime_fragment	FALSE	canonical	1	98698	junction_15	220398.26780866887	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1695	92	1786	65.0	-14	True	AAGAAA	-41
PB.7057.32	chr2	+	4795	25	novel_in_catalog	SP100	novel	3882	25	NA	NA	-15	1237	combination_of_known_junctions	FALSE	canonical	1	46376	junction_24	271919.2879411273	NA	8	1	TRUE	NA	NA	NA	C	coding	859	2580	92	2671	75.0	-14	True	NA	NA
PB.7057.33	chr2	+	2119	22	novel_in_catalog	SP100	novel	3882	25	NA	NA	-15	-4	no_combination_of_known_junctions	FALSE	canonical	1	17205	junction_18	266199.5561397204	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	92	2023	25.0	-14	True	CATAAA	-13
PB.7057.30	chr2	+	1999	22	novel_in_catalog	SP100	novel	3882	25	NA	NA	-16	-125	no_combination_of_known_junctions	FALSE	canonical	1	17205	junction_18	266199.5561397204	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1905	93	1997	55.0	-15	True	NA	NA
PB.7054.10	chr2	-	1927	15	full-splice_match	SP110	ENST00000258382.9	2080	15	128	25	5	-25	multi-exon	FALSE	canonical	1	211447	junction_1	93726.93855001977	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	113	1762	75.0	-10	True	AAAACA	-45
PB.638.4	chr1	+	3400	8	novel_not_in_catalog	MAB21L3	novel	3229	7	NA	NA	-292	-3	any annotated donor/acceptor	FALSE	canonical	1	984	junction_1	4814.5799698119345	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	440	1528	75.0	0	True	NA	NA
PB.11426.8	chr9	+	1943	10	novel_in_catalog	SMARCA2	novel	5855	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6082	junction_2	339283.33077514515	NA	11	1	TRUE	NA	NA	NA	C	coding	254	765	298	1062	20.0	-14	True	AATAAA	-18
PB.11426.9	chr9	+	1836	9	full-splice_match	SMARCA2	ENST00000635590.1	1843	9	8	-1	0	1	multi-exon	FALSE	canonical	1	6082	junction_2	332329.7056194486	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	293	1003	20.0	-9	True	AATAAA	-16
PB.638.1	chr1	+	5319	7	novel_not_in_catalog	MAB21L3	novel	3229	7	NA	NA	-354	2036	any annotated donor/acceptor	FALSE	canonical	1	1517	junction_1	4592.278135329155	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	320	1408	70.0	0	True	NA	NA
PB.7054.13	chr2	-	4371	4	novel_in_catalog	SP110	novel	2426	19	NA	NA	7	3266	intron_retention	FALSE	canonical	1	305525	junction_2	28650.947364596672	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	111	737	75.0	-8	True	NA	NA
PB.7057.38	chr2	+	2538	14	novel_in_catalog	SP100	novel	3882	25	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	431024	junction_1	115442.06027231652	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	85	1296	20.0	-7	True	AATAAA	-15
PB.7057.39	chr2	+	2062	23	novel_in_catalog	SP100	novel	3882	25	NA	NA	-4	-125	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	253863.113753739	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1980	81	2060	55.0	-3	True	NA	NA
PB.11717.4	chr9	-	2557	5	novel_not_in_catalog	PTGR1	novel	1200	10	NA	NA	10	2289	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	171198.42202744598	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	10	True	GATAAA	-16
PB.981.22	chr1	+	5866	23	novel_in_catalog	SMG7	novel	1190	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26724	junction_3	141797.87372087917	NA	4	NA	TRUE	NA	NA	NA	C	coding	806	2421	1187	3607	20.0	-5	True	ATTAAA	-18
PB.12042.5	chrX	-	7234	17	full-splice_match	SLC9A7	ENST00000616978.4	10024	17	26	2764	26	-2764	multi-exon	FALSE	canonical	1	48302	junction_10	43330.115697507375	NA	4	NA	TRUE	NA	NA	NA	C	coding	726	2181	118	2298	15.0	-29	True	ATTAAA	-18
PB.12042.4	chrX	-	4396	12	novel_not_in_catalog	SLC9A7	novel	10024	17	NA	NA	6	-222	any annotated donor/acceptor	TRUE	canonical	1	3375	junction_1	58108.81837488713	NA	6	NA	TRUE	NA	NA	NA	C	coding	521	1566	138	1703	20.0	44	False	AATAAA	-14
PB.12042.7	chrX	-	2076	1	incomplete-splice_match	SLC9A7	ENST00000616978.4	10024	17	155081	2764	16925	-2764	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	ATTAAA	-18
PB.12042.6	chrX	-	2690	19	novel_not_in_catalog	SLC9A7	novel	10024	17	NA	NA	28	-2764	any annotated donor/acceptor	FALSE	canonical	1	2550	junction_1	51084.51514372174	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	116	2296	15.0	-27	True	ATTAAA	-18
PB.12042.9	chrX	-	4793	17	full-splice_match	SLC9A7	ENST00000616978.4	10024	17	32	5199	32	867	multi-exon	FALSE	canonical	1	48302	junction_10	43330.115697507375	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	112	2292	90.0	-23	True	NA	NA
PB.4308.1	chr16	-	3126	9	novel_in_catalog	CDR2	novel	2702	5	NA	NA	-80	-8	combination_of_known_junctions	FALSE	canonical	1	2834	junction_6	151212.31494444946	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	894	2105	45.0	214	False	AATAAA	-11
PB.4308.2	chr16	-	3148	10	novel_in_catalog	CDR2	novel	2702	5	NA	NA	-48	-8	combination_of_known_junctions	FALSE	canonical	1	2834	junction_7	148346.26777089998	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	916	2127	45.0	246	False	AATAAA	-11
PB.4308.3	chr16	-	2400	5	full-splice_match	CDR2	ENST00000268383.6	2702	5	294	8	114	-8	multi-exon	FALSE	canonical	1	207059	junction_4	74654.10215286231	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	15	1379	45.0	2841	False	AATAAA	-11
PB.11709.2	chr9	-	2459	19	full-splice_match	CTNNAL1	ENST00000325551.8	2490	19	30	1	13	-1	multi-exon	FALSE	canonical	1	255171	junction_18	128997.30859619408	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	58	2262	25.0	-1	True	AATAAA	-23
PB.9622.4	chr5	+	2654	10	full-splice_match	ERGIC1	ENST00000393784.7	2881	10	59	168	-1	-163	multi-exon	FALSE	canonical	1	810105	junction_1	396191.2984647819	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	81	953	85.0	-10	True	NA	NA
PB.4394.3	chr16	+	4930	13	full-splice_match	FUS	ENST00000487509.6	4920	13	-11	1	0	-1	multi-exon	FALSE	canonical	1	1093603	junction_5	1620912.410857942	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	77	844	15.0	0	True	ATTAAA	-16
PB.5088.1	chr17	+	3063	1	novel_in_catalog	ATP5MC1	novel	598	5	NA	NA	3	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	128	387	2524	2910	15.0	11	True	ATTAAA	-14
PB.4394.1	chr16	+	1992	15	full-splice_match	FUS	ENST00000254108.11	5119	15	32	3095	3	171	multi-exon	FALSE	canonical	1	1093603	junction_5	1525653.2012149328	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	74	1654	40.0	3	True	ATTAAA	-17
PB.5088.3	chr17	+	2718	2	novel_in_catalog	ATP5MC1	novel	598	5	NA	NA	13	-1	intron_retention	FALSE	canonical	1	1143836	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6280	False	ATTAAA	-14
PB.4394.7	chr16	+	5069	15	full-splice_match	FUS	ENST00000380244.7	1818	15	1	-3252	1	-17	multi-exon	FALSE	canonical	1	999559	junction_3	1646377.1679452723	NA	2	NA	TRUE	NA	NA	NA	C	coding	525	1578	76	1653	40.0	1	True	AATAAA	-20
PB.4394.6	chr16	+	3442	14	novel_in_catalog	FUS	novel	5119	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	1093603	junction_5	1559207.7859374841	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	76	843	15.0	1	True	ATTAAA	-17
PB.4394.5	chr16	+	7099	12	novel_in_catalog	FUS	novel	5119	15	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1093603	junction_4	1656931.171681517	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	2286	2798	15.0	1	True	ATTAAA	-16
PB.4394.4	chr16	+	1782	14	novel_in_catalog	FUS	novel	5119	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	89793	junction_6	1970470.325339829	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	77	865	15.0	0	True	ATTAAA	-16
PB.2982.21	chr12	-	2039	9	incomplete-splice_match	CLIP1	ENST00000537178.5	5229	24	17	69185	-3	-140	3prime_fragment	FALSE	canonical	1	109019	junction_8	82568.94007575957	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1836	202	2037	75.0	-4	True	NA	NA
PB.4289.1	chr16	-	2379	2	novel_not_in_catalog	AC027130.1	novel	686	3	NA	NA	-1	410	intron_retention	FALSE	canonical	1	2330	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	151	456	7	462	20.0	1527	False	NA	NA
PB.4394.9	chr16	+	6122	12	novel_in_catalog	FUS	novel	5119	15	NA	NA	2	0	intron_retention	FALSE	canonical	1	1093603	junction_4	1587986.765627212	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	1382	2035	15.0	2	True	ATTAAA	-17
PB.4289.3	chr16	-	2055	3	novel_not_in_catalog	AC027130.1	novel	686	3	NA	NA	3	409	intron_retention	FALSE	canonical	1	2330	junction_2	618.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	133	402	28	429	20.0	2	True	NA	NA
PB.11674.9	chr9	-	3257	10	full-splice_match	TSTD2	ENST00000341170.4	4320	10	217	846	-57	-846	multi-exon	FALSE	canonical	1	71077	junction_8	27048.167990722053	NA	1	1	TRUE	NA	NA	NA	C	coding	516	1551	167	1717	75.0	0	True	AATGAA	-11
PB.11674.8	chr9	-	3898	9	novel_in_catalog	TSTD2	novel	4320	10	NA	NA	-71	-4	no_combination_of_known_junctions	FALSE	canonical	1	2733	junction_8	46155.8953437627	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	644	1516	40.0	-14	True	AATAAA	-18
PB.6911.5	chr2	+	3716	30	novel_in_catalog	MYO1B	novel	572	6	NA	NA	-3	65	combination_of_known_junctions	FALSE	canonical	1	108124	junction_22	161051.67680723144	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	251	3574	35.0	-22	True	AATAAA	-16
PB.2677.21	chr12	-	860	6	full-splice_match	CNPY2	ENST00000273308.8	1214	6	328	26	-8	-21	multi-exon	FALSE	canonical	1	1028955	junction_5	363673.69038323354	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	214	762	70.0	37	True	NA	NA
PB.2677.22	chr12	-	1679	3	full-splice_match	CNPY2	ENST00000548013.5	817	3	2	-864	2	864	multi-exon	FALSE	canonical	1	1028955	junction_2	348351.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.9136.6	chr5	-	2289	7	novel_in_catalog	FASTKD3	novel	2402	7	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	2005	junction_6	63318.26476201178	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	78	2015	20.0	-26	True	AATAAA	-14
PB.11614.3	chr9	+	2627	14	novel_in_catalog	CEP78	novel	11198	16	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	2490	junction_11	52873.775637621286	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	284	2323	20.0	-13	True	AATAAA	-16
PB.9136.4	chr5	-	3356	6	full-splice_match	FASTKD3	ENST00000507036.1	2229	6	-885	-242	-18	-2	multi-exon	FALSE	canonical	1	29879	junction_3	59053.922827869785	NA	8	NA	TRUE	NA	NA	NA	C	coding	608	1827	973	2799	20.0	-26	True	AATAAA	-14
PB.9136.5	chr5	-	2452	7	novel_in_catalog	FASTKD3	novel	2402	7	NA	NA	4	-2	intron_retention	FALSE	canonical	1	18962	junction_6	68558.95803714413	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	69	1895	20.0	7	True	AATAAA	-14
PB.9136.2	chr5	-	2574	7	novel_in_catalog	FASTKD3	novel	2402	7	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	18652	junction_6	68630.39638709658	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	190	2016	20.0	-25	True	AATAAA	-15
PB.9136.3	chr5	-	2401	7	full-splice_match	FASTKD3	ENST00000264669.9	2402	7	0	1	0	-1	multi-exon	FALSE	canonical	1	18652	junction_6	58055.70707135996	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	138	2126	20.0	27	True	AATAAA	-15
PB.9136.1	chr5	-	2369	7	novel_in_catalog	FASTKD3	novel	2402	7	NA	NA	-1	25	intron_retention	FALSE	canonical	1	18962	junction_6	57959.4743161116	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	80	2068	35.0	-4	True	AATAAA	-41
PB.175.3	chr1	+	1742	12	full-splice_match	NIPAL3	ENST00000374399.8	1711	12	-10	-21	-10	21	multi-exon	FALSE	canonical	1	184044	junction_1	48053.6719540189	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	379	1599	25.0	-18	True	AAAAAG	-15
PB.12308.2	chrX	+	3473	16	novel_not_in_catalog	MTM1	novel	3593	15	NA	NA	-17	-182	any annotated donor/acceptor	FALSE	canonical	1	1224	junction_4	40700.721593057235	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	72	1928	20.0	-19	True	AATAAA	-17
PB.9136.8	chr5	-	5164	1	genic	FASTKD3	novel	NA	NA	NA	NA	-3	-2257	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	503	1512	947	2458	80.0	0	True	NA	NA
PB.3721.1	chr15	-	2130	2	full-splice_match	AC068446.2	ENST00000500487.2	2165	2	35	0	35	0	multi-exon	FALSE	canonical	1	36	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-16
PB.10072.6	chr6	-	1109	5	novel_in_catalog	HMGN3	novel	872	6	NA	NA	8	-300	intron_retention	FALSE	canonical	1	692126	junction_3	222544.7326925252	NA	0	NA	TRUE	NA	NA	NA	C	coding	95	288	122	409	20.0	0	True	AATATA	-16
PB.10072.7	chr6	-	2047	1	novel_in_catalog	HMGN3	novel	872	6	NA	NA	27	-31367	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	165	498	103	600	90.0	19	True	NA	NA
PB.10072.4	chr6	-	2592	4	novel_in_catalog	HMGN3	novel	872	6	NA	NA	17	2	intron_retention	FALSE	canonical	1	692126	junction_2	177806.54163631515	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	1014	1388	30.0	9	True	AATAAA	-19
PB.5243.2	chr17	+	1211	5	full-splice_match	MRPS7	ENST00000245539.10	1406	5	197	-2	-41	2	multi-exon	TRUE	canonical	1	990924	junction_1	232617.33810273043	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	31	759	10.0	-23	True	TATAAA	-18
PB.10072.2	chr6	-	1401	5	novel_in_catalog	HMGN3	novel	872	6	NA	NA	18	2	intron_retention	FALSE	canonical	1	692126	junction_3	222544.7326925252	NA	1	NA	TRUE	NA	NA	NA	C	coding	95	288	112	399	30.0	10	True	AATAAA	-19
PB.10072.3	chr6	-	839	6	full-splice_match	HMGN3	ENST00000344726.9	872	6	31	2	31	2	multi-exon	FALSE	canonical	1	692126	junction_4	209861.96895006965	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	99	398	30.0	23	True	AATAAA	-19
PB.6445.32	chr2	-	3750	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	597	junction_14	205249.02108714086	NA	3	NA	TRUE	NA	NA	NA	C	coding	727	2184	1038	3221	35.0	1	True	AATAAA	-23
PB.10072.1	chr6	-	2910	4	novel_in_catalog	HMGN3	novel	872	6	NA	NA	17	316	intron_retention	FALSE	canonical	1	692126	junction_2	177806.54163631515	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	1014	1388	100.0	9	True	TATAAA	-32
PB.2353.14	chr11	+	2880	19	full-splice_match	STT3A	ENST00000529196.5	2402	19	16	-494	-6	156	multi-exon	FALSE	canonical	1	17246	junction_1	491081.0323813458	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	191	2308	15.0	-15	True	NA	NA
PB.2353.15	chr11	+	2384	18	novel_not_in_catalog	STT3A	novel	569	5	NA	NA	-4	169	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	397431.9423873371	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	101	2137	35.0	-13	True	ATTAAA	-16
PB.2353.10	chr11	+	2142	16	novel_not_in_catalog	STT3A	novel	569	5	NA	NA	11	169	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	391037.4281985805	NA	3	1	TRUE	NA	NA	NA	C	coding	595	1788	108	1895	35.0	-20	True	ATTAAA	-16
PB.2353.11	chr11	+	4174	18	full-splice_match	STT3A	ENST00000392708.8	4558	18	54	330	-9	40	multi-exon	FALSE	canonical	1	1048542	junction_1	216906.22312634153	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	106	2223	10.0	-18	True	NA	NA
PB.2353.12	chr11	+	2558	19	full-splice_match	STT3A	ENST00000529196.5	2402	19	13	-169	-9	169	multi-exon	FALSE	canonical	1	17246	junction_1	491081.0323813458	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	194	2311	35.0	-18	True	ATTAAA	-16
PB.2353.13	chr11	+	3789	18	full-splice_match	STT3A	ENST00000392708.8	4558	18	55	714	-8	-344	multi-exon	FALSE	canonical	1	1048542	junction_1	216906.22312634153	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	105	2222	35.0	-17	True	TATAAA	-14
PB.11614.5	chr9	+	3235	17	full-splice_match	CEP78	ENST00000643273.1	2722	17	-36	-477	2	15	multi-exon	FALSE	canonical	1	89710	junction_1	36903.97150073883	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	278	2395	0.0	-7	True	AATGAA	-23
PB.10195.1	chr6	+	1787	8	full-splice_match	SMPDL3A	ENST00000368440.4	1851	8	61	3	61	0	multi-exon	FALSE	canonical	1	74027	junction_1	28318.739615098602	NA	1	NA	TRUE	NA	NA	NA	A	coding	453	1362	117	1478	35.0	0	True	AATAAA	-18
PB.175.2	chr1	+	5418	12	full-splice_match	NIPAL3	ENST00000374399.8	1711	12	-39	-3668	-39	-1	multi-exon	FALSE	canonical	1	184044	junction_1	48053.6719540189	NA	4	NA	TRUE	NA	NA	NA	C	coding	406	1221	408	1628	20.0	-103	False	ATTAAA	-14
PB.11614.4	chr9	+	3062	17	novel_not_in_catalog	CEP78	novel	11198	16	NA	NA	-3	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	53154.83330648158	NA	1	1	TRUE	NA	NA	NA	C	coding	658	1977	283	2259	15.0	-12	True	AATGAA	-11
PB.7043.17	chr2	-	2107	9	full-splice_match	SERPINE2	ENST00000409304.5	2161	9	2	52	2	-11	multi-exon	FALSE	canonical	1	893005	junction_8	460077.7290179991	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	211	1404	45.0	-1	True	AATAAA	-13
PB.7787.5	chr22	+	1759	4	full-splice_match	APOBEC3C	ENST00000361441.4	2818	4	174	885	-5	541	multi-exon	FALSE	canonical	1	687980	junction_1	22576.802312698463	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	107	679	45.0	0	True	NA	NA
PB.11614.9	chr9	+	2642	16	full-splice_match	CEP78	ENST00000645398.1	2684	16	117	-75	20	2	multi-exon	FALSE	canonical	1	89710	junction_1	34899.28419679821	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	170	2335	30.0	101	False	AATAAA	-19
PB.11538.2	chr9	+	2302	16	novel_in_catalog	MELK	novel	2485	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10533	junction_1	98473.40739757557	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	252	1958	10.0	-35	True	AATAAA	-16
PB.11960.1	chrX	+	4591	6	incomplete-splice_match	SHROOM2	ENST00000380913.7	7447	10	111708	2	19	0	5prime_fragment	FALSE	canonical	1	32359	junction_4	8263.508538145283	NA	0	NA	TRUE	NA	NA	NA	B	coding	451	1356	732	2087	25.0	-7	True	AATAAA	-18
PB.11960.2	chrX	+	3496	6	incomplete-splice_match	SHROOM2	ENST00000380913.7	7447	10	111724	1081	35	-1079	5prime_fragment	FALSE	canonical	1	32359	junction_4	8263.508538145283	NA	1	NA	TRUE	NA	NA	NA	B	coding	451	1356	716	2071	15.0	9	True	ATTAAA	-20
PB.7529.3	chr21	+	3227	19	novel_in_catalog	MX1	novel	762	5	NA	NA	105	0	no_combination_of_known_junctions	FALSE	canonical	1	1015	junction_1	387087.87433192163	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	784	2772	10.0	-15	True	AATAAA	-17
PB.11149.1	chr8	+	4782	8	full-splice_match	RAB2A	ENST00000262646.11	3848	8	77	-1011	-2	1011	multi-exon	FALSE	canonical	1	886578	junction_3	286603.831760776	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	413	913	35.0	-2	True	NA	NA
PB.10457.1	chr7	-	1897	2	full-splice_match	HOXA10	ENST00000283921.4	2541	2	637	7	586	-6	multi-exon	FALSE	canonical	1	101544	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	52	159	438	596	20.0	-1	True	AATAAA	-22
PB.3974.1	chr15	-	3382	2	full-splice_match	AC012435.1	ENST00000563287.1	3385	2	3	0	3	0	multi-exon	FALSE	canonical	1	483	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-1	True	AATAAA	-15
PB.11149.7	chr8	+	1028	8	full-splice_match	RAB2A	ENST00000262646.11	3848	8	130	2690	51	-1	multi-exon	FALSE	canonical	1	886578	junction_3	286603.831760776	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	222	860	45.0	0	True	AATAAA	-17
PB.479.2	chr1	+	2177	12	novel_not_in_catalog	ACADM	novel	2535	11	NA	NA	-74	5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	284967.48365992756	NA	1	1	TRUE	NA	NA	NA	C	coding	335	1008	437	1444	15.0	-5297	False	AATAAA	-21
PB.479.3	chr1	+	2010	11	full-splice_match	ACADM	ENST00000541113.5	2535	11	342	183	-2	5	multi-exon	FALSE	canonical	1	77016	junction_1	277102.87664816837	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	120	1277	15.0	-66	True	AATAAA	-21
PB.479.1	chr1	+	2024	12	full-splice_match	ACADM	ENST00000370841.8	2619	12	411	184	1	4	multi-exon	FALSE	canonical	1	750250	junction_1	114069.89592655117	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	27	1292	15.0	7	True	AATAAA	-20
PB.10534.1	chr7	+	1946	9	full-splice_match	ADCY1	ENST00000621543.1	1647	9	-292	-7	71	6	multi-exon	FALSE	canonical	1	26722	junction_8	20620.06220854765	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	627	1643	5.0	-4007	False	NA	NA
PB.479.7	chr1	+	1334	12	full-splice_match	ACADM	ENST00000370841.8	2619	12	360	925	2	-55	multi-exon	FALSE	canonical	1	750250	junction_1	114069.89592655117	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1257	78	1334	65.0	-44	True	NA	NA
PB.479.4	chr1	+	2174	11	full-splice_match	ACADM	ENST00000541113.5	2535	11	359	2	0	-2	multi-exon	FALSE	canonical	1	77016	junction_1	277102.87664816837	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	103	1260	35.0	-49	True	TATAAA	-23
PB.479.5	chr1	+	2237	12	full-splice_match	ACADM	ENST00000370841.8	2619	12	379	3	21	-3	multi-exon	FALSE	canonical	1	750250	junction_1	114069.89592655117	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	59	1324	40.0	-25	True	TATAAA	-22
PB.479.8	chr1	+	1887	10	novel_in_catalog	ACADM	novel	2535	11	NA	NA	4	7	combination_of_known_junctions	FALSE	canonical	1	18064	junction_3	384742.0798421768	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	277	1152	15.0	-42	True	AATAAA	-23
PB.479.9	chr1	+	1789	12	full-splice_match	ACADM	ENST00000370841.8	2619	12	369	461	11	50	multi-exon	FALSE	canonical	1	750250	junction_1	114069.89592655117	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	69	1334	35.0	-35	True	ATTAAA	-22
PB.1928.12	chr11	+	5671	32	novel_in_catalog	MADD	novel	437	3	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	9780	junction_1	101682.8033244912	NA	0	NA	TRUE	NA	NA	NA	C	coding	1520	4563	228	4790	5.0	-2085	False	NA	NA
PB.1928.11	chr11	+	5773	34	novel_in_catalog	MADD	novel	437	3	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	1	46073	junction_16	113234.58837245265	NA	1	1	TRUE	NA	NA	NA	C	coding	1565	4698	194	4891	5.0	6	True	NA	NA
PB.1928.10	chr11	+	5902	34	novel_in_catalog	MADD	novel	437	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	46073	junction_16	113688.8324901661	NA	4	1	TRUE	NA	NA	NA	C	coding	1608	4827	196	5022	5.0	4	True	NA	NA
PB.1886.29	chr11	+	3217	16	novel_in_catalog	CAPRIN1	novel	4108	19	NA	NA	13	51	no_combination_of_known_junctions	FALSE	canonical	1	3395	junction_6	599197.2933803801	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	80	1051	35.0	1	True	AATAAA	-24
PB.1886.28	chr11	+	3935	17	novel_in_catalog	CAPRIN1	novel	4108	19	NA	NA	13	1	no_combination_of_known_junctions	FALSE	canonical	1	7935	junction_16	552088.1780319628	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	80	2125	10.0	1	True	AATAAA	-23
PB.838.6	chr1	-	2600	9	novel_in_catalog	FCRL5	novel	5390	17	NA	NA	8	-2	no_combination_of_known_junctions	FALSE	canonical	1	248	junction_7	18933.377346633115	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	151	2175	25.0	-36	True	ATTAAA	-17
PB.1886.21	chr11	+	5492	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	88	-2142	-31	1450	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	4	NA	TRUE	NA	NA	NA	C	coding	709	2130	124	2253	10.0	-2	True	ATTAAA	-10
PB.1886.20	chr11	+	3121	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	368	-51	249	51	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	3	1973	35.0	178	False	AATAAA	-24
PB.1886.23	chr11	+	4818	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	90	-1470	-29	778	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	122	2251	35.0	0	True	TATAAA	-14
PB.1886.22	chr11	+	3207	18	novel_not_in_catalog	CAPRIN1	novel	4108	19	NA	NA	-30	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	569634.1231536713	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	123	2207	40.0	-1	True	NA	NA
PB.1886.25	chr11	+	3825	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	90	-477	-29	-210	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	122	2251	25.0	0	True	ATTAAA	-17
PB.1886.24	chr11	+	3889	17	novel_in_catalog	CAPRIN1	novel	4108	19	NA	NA	-29	0	no_combination_of_known_junctions	FALSE	canonical	1	34512	junction_13	576843.9379683859	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	122	1720	10.0	0	True	AATAAA	-22
PB.1886.27	chr11	+	2544	18	full-splice_match	CAPRIN1	ENST00000532820.5	3438	18	91	803	-28	147	multi-exon	FALSE	canonical	1	1319017	junction_1	330352.125504293	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	121	2250	30.0	1	True	AGTAAA	-24
PB.1886.26	chr11	+	3332	16	novel_in_catalog	CAPRIN1	novel	4108	19	NA	NA	-29	0	no_combination_of_known_junctions	FALSE	canonical	1	34512	junction_13	595502.4099235648	NA	6	2	TRUE	NA	NA	NA	C	coding	532	1599	122	1720	35.0	0	True	NA	NA
PB.916.2	chr1	+	2823	3	incomplete-splice_match	SFT2D2	ENST00000367829.5	491	6	16	4768	16	-2378	3prime_fragment	FALSE	canonical	1	179273	junction_1	14803.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-9134	False	NA	NA
PB.12211.3	chrX	-	4403	7	full-splice_match	RBM41	ENST00000372479.7	1662	7	-23	-2718	-4	0	multi-exon	FALSE	canonical	1	58848	junction_3	39357.600981259005	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	55	1296	75.0	-6	True	NA	NA
PB.838.4	chr1	-	2951	11	novel_in_catalog	FCRL5	novel	5390	17	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	5252	junction_9	18663.766647973287	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	994	2526	25.0	-39	True	ATTAAA	-17
PB.916.6	chr1	+	3409	8	full-splice_match	SFT2D2	ENST00000271375.6	11040	8	2	7629	2	2256	multi-exon	FALSE	canonical	1	179273	junction_1	37958.57644263047	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	71	553	30.0	6	True	NA	NA
PB.916.7	chr1	+	3675	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	5	1	TRUE	NA	NA	NA	C	coding	160	483	71	553	20.0	6	True	AATAAA	-24
PB.916.4	chr1	+	3971	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	1	1	TRUE	NA	NA	NA	C	coding	160	483	77	559	20.0	0	True	AATAAA	-24
PB.9855.7	chr6	+	2398	4	full-splice_match	TUBB	ENST00000327892.12	2670	4	262	10	262	-10	multi-exon	FALSE	canonical	1	15151	junction_3	2183583.7504968755	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	45	1379	40.0	-4826	False	AATAAA	-10
PB.916.8	chr1	+	3647	15	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	3	61399	any annotated donor/acceptor	FALSE	canonical	1	7069	junction_8	107194.48199950806	NA	5	1	TRUE	NA	NA	NA	C	coding	379	1140	1086	2225	25.0	7	True	NA	NA
PB.4261.5	chr16	-	3006	23	novel_in_catalog	PARN	novel	3078	24	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	6213	junction_20	111946.53778759827	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	273	1991	5.0	-5	True	ATTAAA	-15
PB.4300.10	chr16	+	1757	5	full-splice_match	METTL9	ENST00000358154.7	3256	5	143	1356	27	-2	multi-exon	FALSE	canonical	1	815486	junction_1	214970.8760216137	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	116	1072	85.0	27	True	NA	NA
PB.10865.2	chr7	-	3274	11	full-splice_match	CNOT4	ENST00000361528.8	2215	11	-11	-1048	-11	-39	multi-exon	FALSE	canonical	1	72399	junction_1	57578.182493805754	NA	1	1	TRUE	NA	NA	NA	C	coding	639	1920	307	2226	65.0	-1	True	ACTAAA	-32
PB.10865.3	chr7	-	3486	12	full-splice_match	CNOT4	ENST00000451834.5	3507	12	-21	42	-10	-39	multi-exon	FALSE	canonical	1	55354	junction_2	62801.72701920737	NA	1	1	TRUE	NA	NA	NA	C	coding	710	2133	306	2438	65.0	0	True	ACTAAA	-32
PB.8397.47	chr3	+	4443	26	novel_not_in_catalog	ATP2C1	novel	4888	27	NA	NA	447	-50	any annotated donor/acceptor	FALSE	canonical	1	5626	junction_9	236742.0524654933	NA	2	NA	TRUE	NA	NA	NA	C	coding	595	1788	949	2736	30.0	-1452	False	ATTAAA	-24
PB.9855.5	chr6	+	2003	5	novel_not_in_catalog	TUBB	novel	2670	4	NA	NA	151	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	2191069.4712269367	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	637	984	40.0	0	True	AATAAA	-10
PB.10865.6	chr7	-	4629	13	novel_not_in_catalog	CNOT4	novel	3507	12	NA	NA	-6	-21	any annotated donor/acceptor	FALSE	canonical	1	796	junction_1	90926.97560894066	NA	2	1	TRUE	NA	NA	NA	C	coding	244	735	302	1036	90.0	4	True	NA	NA
PB.10865.7	chr7	-	3660	11	full-splice_match	CNOT4	ENST00000428680.6	4642	11	-26	1008	-11	-89	multi-exon	FALSE	canonical	1	61643	junction_1	59474.834064921946	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	307	2025	35.0	-1	True	AATAAA	-17
PB.10865.4	chr7	-	4977	11	full-splice_match	CNOT4	ENST00000428680.6	4642	11	-26	-309	-11	309	multi-exon	FALSE	canonical	1	61643	junction_1	59474.834064921946	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	307	2025	45.0	-1	True	NA	NA
PB.10865.5	chr7	-	4668	11	full-splice_match	CNOT4	ENST00000315544.6	3783	11	14	-899	14	-20	multi-exon	FALSE	canonical	1	52290	junction_4	66201.47488394802	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	318	2045	95.0	-12	False	NA	NA
PB.9855.2	chr6	+	2434	5	novel_not_in_catalog	TUBB	novel	2670	4	NA	NA	151	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	2191069.4712269367	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	560	1405	20.0	0	True	AATAAA	-20
PB.10865.8	chr7	-	3119	11	full-splice_match	CNOT4	ENST00000315544.6	3783	11	26	638	-10	-638	multi-exon	FALSE	canonical	1	52290	junction_4	66201.47488394802	NA	2	1	TRUE	NA	NA	NA	C	coding	575	1728	306	2033	20.0	0	True	NA	NA
PB.10865.9	chr7	-	2801	11	full-splice_match	CNOT4	ENST00000428680.6	4642	11	-26	1867	-11	-948	multi-exon	FALSE	canonical	1	61643	junction_1	59474.834064921946	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	307	2025	45.0	-1	True	AGTAAA	-12
PB.2856.1	chr12	+	1752	5	novel_not_in_catalog	C12orf45	novel	23529	4	NA	NA	1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	185035.9165153822	NA	1	NA	TRUE	NA	NA	NA	A	coding	185	558	14	571	10.0	2	True	NA	NA
PB.9855.3	chr6	+	2214	4	full-splice_match	TUBB	ENST00000327892.12	2670	4	151	305	151	-305	multi-exon	FALSE	canonical	1	15151	junction_3	2183583.7504968755	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	156	1490	30.0	0	True	NA	NA
PB.7909.14	chr3	+	4717	7	incomplete-splice_match	EDEM1	ENST00000256497.8	6146	12	17392	256	9959	-256	5prime_fragment	FALSE	canonical	1	368838	junction_3	89381.93435740928	NA	4	NA	TRUE	NA	NA	NA	C	coding	267	804	131	934	55.0	-5662	False	AAGAAA	-16
PB.7909.15	chr3	+	4980	7	incomplete-splice_match	EDEM1	ENST00000256497.8	6146	12	17392	-7	9959	7	5prime_fragment	FALSE	canonical	1	368838	junction_3	89381.93435740928	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	131	934	15.0	-5662	False	ATTAAA	-23
PB.10430.15	chr7	-	2976	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	-3	10204	-2	94	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	237	1802	75.0	-3	True	NA	NA
PB.7909.10	chr3	+	4540	12	full-splice_match	EDEM1	ENST00000256497.8	6146	12	38	1568	-9	-1568	multi-exon	FALSE	canonical	1	218361	junction_1	108025.90711950415	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	186	2069	20.0	4	True	NA	NA
PB.7909.11	chr3	+	5979	12	full-splice_match	EDEM1	ENST00000256497.8	6146	12	62	105	15	-105	multi-exon	FALSE	canonical	1	218361	junction_1	108025.90711950415	NA	3	NA	TRUE	NA	NA	NA	C	coding	627	1884	162	2045	40.0	0	True	ATTAAA	-14
PB.4970.12	chr17	-	2377	1	novel_in_catalog	SMARCE1	novel	6196	11	NA	NA	0	-2565	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	155	468	2	469	85.0	-20	True	NA	NA
PB.4970.11	chr17	-	5062	1	novel_in_catalog	SMARCE1	novel	6196	11	NA	NA	-1	112	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	158	477	1	477	80.0	-28	True	AAAACA	-42
PB.4970.10	chr17	-	2958	3	full-splice_match	SMARCE1	ENST00000643806.1	2828	3	-18	-112	0	112	multi-exon	FALSE	canonical	1	140968	junction_1	204344.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-25	True	AAAACA	-42
PB.7909.19	chr3	+	4341	2	incomplete-splice_match	EDEM1	ENST00000256497.8	6146	12	25645	-7	18212	7	5prime_fragment	FALSE	canonical	1	550982	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5055	False	ATTAAA	-23
PB.2520.6	chr12	+	2808	16	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-18	495	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71742.06471767838	NA	2	1	TRUE	NA	NA	NA	C	coding	588	1767	185	1951	55.0	0	True	NA	NA
PB.2520.7	chr12	+	2330	15	full-splice_match	ARNTL2	ENST00000261178.9	1843	15	-179	-308	22	4	multi-exon	FALSE	canonical	1	91002	junction_1	49073.646677307195	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	198	1964	40.0	11	True	AATATA	-21
PB.2520.4	chr12	+	3495	16	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-18	-924	any annotated donor/acceptor	FALSE	canonical	1	338	junction_15	71678.80755320145	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	238	2004	30.0	0	True	AATAAA	-13
PB.2520.5	chr12	+	3213	16	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-18	-1206	any annotated donor/acceptor	FALSE	canonical	1	338	junction_15	71678.80755320145	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	238	2004	15.0	0	True	NA	NA
PB.2520.2	chr12	+	4466	16	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-19	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	71742.0647176784	NA	2	1	TRUE	NA	NA	NA	C	coding	588	1767	239	2005	25.0	-1	True	AATAAA	-17
PB.2520.3	chr12	+	3603	17	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	-18	-925	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	87523.60919346276	NA	1	1	TRUE	NA	NA	NA	C	coding	622	1869	238	2106	30.0	0	True	AATAAA	-12
PB.2520.1	chr12	+	1949	15	full-splice_match	ARNTL2	ENST00000261178.9	1843	15	-111	5	24	-5	multi-exon	FALSE	canonical	1	91002	junction_1	49073.646677307195	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	130	1896	40.0	-18	False	TTTAAA	-15
PB.465.5	chr1	-	6256	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-7	-2767	6	-461	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	4	NA	TRUE	NA	NA	NA	C	coding	408	1227	94	1320	20.0	24	False	TATAAA	-15
PB.465.4	chr1	-	5448	8	novel_not_in_catalog	SERBP1	novel	6676	8	NA	NA	-1048	-456	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	440959.8128558165	NA	5	NA	TRUE	NA	NA	NA	C	coding	209	630	105	734	20.0	4249	False	TATAAA	-20
PB.6858.1	chr2	+	1889	2	full-splice_match	HOXD1	ENST00000331462.5	1975	2	85	1	85	-1	multi-exon	FALSE	canonical	1	10663	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	328	987	139	1125	5.0	-4	True	AATAAA	-15
PB.465.1	chr1	-	6436	9	novel_not_in_catalog	SERBP1	novel	6676	8	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	419046.1110648915	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	87	1268	30.0	31	False	AGTAAA	-19
PB.2520.8	chr12	+	3305	17	novel_not_in_catalog	ARNTL2	novel	6785	16	NA	NA	11	-1194	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	87523.60919346276	NA	2	1	TRUE	NA	NA	NA	C	coding	622	1869	209	2077	20.0	0	True	NA	NA
PB.2520.9	chr12	+	2427	16	full-splice_match	ARNTL2	ENST00000311001.9	1888	16	-177	-362	24	1	multi-exon	FALSE	canonical	1	26753	junction_3	76140.12727351241	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	196	2064	35.0	13	True	AATATA	-18
PB.635.61	chr1	-	3071	20	full-splice_match	CSDE1	ENST00000369530.5	3774	20	3	700	3	-55	multi-exon	FALSE	canonical	1	164728	junction_18	1691347.8370368776	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	473	2914	75.0	621	False	NA	NA
PB.12223.1	chrX	+	4225	27	novel_in_catalog	ALG13	novel	745	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	43525	junction_3	70752.37117937772	NA	0	NA	TRUE	NA	NA	NA	C	coding	1033	3102	478	3579	30.0	0	True	AATAAA	-21
PB.12223.2	chrX	+	4101	27	full-splice_match	ALG13	ENST00000394780.7	4133	27	29	3	0	1	multi-exon	FALSE	canonical	1	43525	junction_3	71365.38669829817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3414	41	3454	25.0	0	True	AATAAA	-22
PB.2486.14	chr12	-	4393	1	genic	WBP11	novel	NA	NA	NA	NA	-36	257	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-99	False	NA	NA
PB.2486.13	chr12	-	2189	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	57	2400	3	-2400	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	178	2103	15.0	-6	True	ATTAAA	-19
PB.2486.12	chr12	-	2481	12	full-splice_match	WBP11	ENST00000261167.6	4646	12	37	2128	-17	-2128	multi-exon	FALSE	canonical	1	279116	junction_8	140700.21849719007	NA	13	1	TRUE	NA	NA	NA	C	coding	641	1926	198	2123	55.0	-26	True	NA	NA
PB.11185.24	chr8	-	3316	14	novel_not_in_catalog	STAU2	novel	2646	12	NA	NA	0	-85	any annotated donor/acceptor	FALSE	canonical	1	40	junction_10	101835.67009636815	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	338	1942	55.0	-1	True	AATAAA	-32
PB.7037.41	chr2	+	2675	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	49	-4	any annotated donor/acceptor	FALSE	canonical	1	925	junction_1	331988.4766973695	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	380	2509	15.0	-30	True	AGTAAA	-13
PB.7037.40	chr2	+	3115	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	25	14	any annotated donor/acceptor	FALSE	canonical	1	925	junction_1	331988.4766973695	NA	2	1	TRUE	NA	NA	NA	C	coding	709	2130	404	2533	25.0	-54	False	AATAAA	-40
PB.920.9	chr1	+	2366	7	full-splice_match	BLZF1	ENST00000367808.7	2749	7	245	138	-22	-138	multi-exon	FALSE	canonical	1	172669	junction_5	31137.31933798341	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	179	1381	40.0	20	True	ATTAAA	-18
PB.920.8	chr1	+	2525	7	novel_in_catalog	BLZF1	novel	1295	3	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	1	8549	junction_1	82396.18614235465	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	201	1403	15.0	18	True	AATAAA	-17
PB.920.5	chr1	+	4871	2	incomplete-splice_match	BLZF1	ENST00000367807.7	1295	3	232	3181	-35	-2692	3prime_fragment	FALSE	canonical	1	175472	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	7	True	NA	NA
PB.12362.1	chrX	-	2504	5	full-splice_match	F8	ENST00000330287.10	2620	5	109	7	109	0	multi-exon	FALSE	canonical	1	34452	junction_4	15122.352445965542	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	52	702	45.0	NA	False	NA	NA
PB.12362.2	chrX	-	2561	5	novel_not_in_catalog	F8	novel	2620	5	NA	NA	-909	1	any annotated donor/acceptor	TRUE	canonical	1	1909	junction_4	28799.99120117053	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	249	758	40.0	NA	False	NA	NA
PB.920.6	chr1	+	3863	6	novel_in_catalog	BLZF1	novel	1295	3	NA	NA	-35	-4	intron_retention	FALSE	canonical	1	172669	junction_4	33995.465374076	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	192	716	15.0	7	True	AATAAA	-14
PB.8530.3	chr3	+	2686	17	incomplete-splice_match	PIK3CA	ENST00000263967.3	9093	21	55019	5439	-16009	-444	5prime_fragment	FALSE	canonical	1	76633	junction_8	45978.91979751257	NA	0	NA	TRUE	NA	NA	NA	B	coding	787	2364	33	2396	85.0	4777	False	AAAAAG	-33
PB.8530.1	chr3	+	3216	19	incomplete-splice_match	PIK3CA	ENST00000263967.3	9093	21	51268	5267	-19760	-272	5prime_fragment	FALSE	canonical	1	76633	junction_10	48575.19778423735	NA	1	NA	TRUE	NA	NA	NA	B	coding	905	2718	37	2754	50.0	1026	False	AGTAAA	-30
PB.8257.52	chr3	+	2211	9	novel_not_in_catalog	ST3GAL6	novel	804	5	NA	NA	196	-309	any annotated donor/acceptor	FALSE	canonical	1	736	junction_1	54114.82547656765	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	110	1027	45.0	-5818	False	TTTAAA	-7
PB.4028.1	chr15	-	1760	1	full-splice_match	AC068870.2	ENST00000620635.1	389	1	-833	-538	-833	538	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.10871.1	chr7	-	7449	12	full-splice_match	CREB3L2	ENST00000330387.10	7412	12	-40	3	-30	-1	multi-exon	FALSE	canonical	1	111277	junction_10	55870.852167896475	NA	2	NA	TRUE	NA	NA	NA	C	coding	520	1563	393	1955	20.0	-12	True	AATAAA	-18
PB.10871.3	chr7	-	7223	11	novel_in_catalog	CREB3L2	novel	7412	12	NA	NA	-20	0	intron_retention	FALSE	canonical	1	8135	junction_10	81678.95055796199	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	649	1728	25.0	-2	True	AATAAA	-19
PB.10871.4	chr7	-	7000	12	novel_not_in_catalog	CREB3L2	novel	7412	12	NA	NA	-2023	0	intron_retention	FALSE	canonical	1	14505	junction_11	81776.56384703443	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	132	1505	25.0	7	True	AATAAA	-19
PB.10871.7	chr7	-	7319	12	full-splice_match	CREB3L2	ENST00000330387.10	7412	12	-27	120	-17	-118	multi-exon	FALSE	canonical	1	111277	junction_10	55870.852167896475	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	380	1942	70.0	1	True	AGTAAA	-5
PB.11768.9	chr9	+	1423	8	novel_in_catalog	MRRF	novel	1841	6	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	1	16029	junction_2	59172.34816247556	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	170	958	35.0	-12	True	AATAAA	-37
PB.2651.18	chr12	+	2572	20	incomplete-splice_match	NCKAP1L	ENST00000545638.2	3612	31	18747	-3	-1306	3	5prime_fragment	FALSE	canonical	1	332068	junction_15	69209.97670268062	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	18	2291	15.0	-1845	False	AAAAAG	-15
PB.777.2	chr1	+	3506	25	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-4	-3	combination_of_known_junctions	TRUE	canonical	1	145293	junction_5	363540.5315890112	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2982	175	3156	10.0	-903	False	AATAAA	-20
PB.11147.5	chr8	-	3511	31	full-splice_match	NSMAF	ENST00000427130.6	3371	31	119	-259	119	-7	multi-exon	FALSE	canonical	1	21870	junction_30	78115.15431691571	NA	0	NA	TRUE	NA	NA	NA	C	coding	948	2847	70	2916	35.0	577	False	ATTAAA	-14
PB.11932.12	chr9	+	5016	26	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	25745	junction_1	93693.37055186776	NA	2	1	TRUE	NA	NA	NA	C	coding	1260	3783	64	3846	25.0	-16	True	AATAAA	-16
PB.3316.8	chr14	-	2344	12	full-splice_match	RBM23	ENST00000346528.9	2361	12	31	-14	2	3	multi-exon	FALSE	canonical	1	92166	junction_8	162238.50316485774	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	160	1377	15.0	1	True	NA	NA
PB.3316.9	chr14	-	2295	12	full-splice_match	RBM23	ENST00000542016.6	1743	12	21	-573	0	3	multi-exon	FALSE	canonical	1	14772	junction_10	173622.53233241546	NA	9	2	TRUE	NA	NA	NA	C	coding	269	810	519	1328	15.0	-9	True	NA	NA
PB.11932.13	chr9	+	4478	25	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	4	-31	combination_of_known_junctions	FALSE	canonical	1	15705	junction_9	117546.96610468799	NA	0	NA	TRUE	NA	NA	NA	C	coding	1219	3660	62	3721	80.0	-14	True	AATAAA	-36
PB.3316.4	chr14	-	2539	14	novel_in_catalog	RBM23	novel	10040	14	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	2908	junction_13	207029.23473842698	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	301	1572	15.0	-1	True	NA	NA
PB.3316.5	chr14	-	2470	13	novel_in_catalog	RBM23	novel	10040	14	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	5173	junction_12	232115.835725802	NA	3	NA	TRUE	NA	NA	NA	C	coding	449	1350	154	1503	15.0	-3	True	NA	NA
PB.3316.6	chr14	-	2446	14	full-splice_match	RBM23	ENST00000359890.7	10040	14	37	7557	2	3	multi-exon	FALSE	canonical	1	198248	junction_10	144824.16167756493	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	160	1479	15.0	1	True	NA	NA
PB.3316.7	chr14	-	2398	13	full-splice_match	RBM23	ENST00000399922.6	2430	13	35	-3	2	3	multi-exon	FALSE	canonical	1	320589	junction_10	106670.01352415334	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	160	1431	15.0	1	True	NA	NA
PB.9874.1	chr6	-	3612	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	-2	12	combination_of_known_junctions	TRUE	canonical	1	436020	junction_24	545309.6831397208	NA	1	NA	TRUE	NA	NA	NA	C	coding	1113	3342	156	3497	20.0	0	True	AATAAA	-43
PB.3316.1	chr14	-	2593	14	full-splice_match	RBM23	ENST00000359890.7	10040	14	7	7440	1	-1	multi-exon	FALSE	canonical	1	198248	junction_10	144824.16167756493	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	190	1509	25.0	7247	False	TATAAA	-15
PB.3316.2	chr14	-	2440	13	full-splice_match	RBM23	ENST00000399922.6	2430	13	21	-31	-4	31	multi-exon	FALSE	canonical	1	320589	junction_10	106670.01352415334	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	174	1445	5.0	-13	True	NA	NA
PB.3316.3	chr14	-	2360	12	full-splice_match	RBM23	ENST00000346528.9	2361	12	43	-42	1	31	multi-exon	FALSE	canonical	1	92166	junction_8	162238.50316485774	NA	4	NA	TRUE	NA	NA	NA	C	coding	405	1218	148	1365	5.0	13	True	NA	NA
PB.864.16	chr1	-	1496	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-10	51	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	2	1	TRUE	NA	NA	NA	B	coding	276	831	81	911	20.0	-11	True	NA	NA
PB.7306.14	chr20	-	2564	11	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-8	-1779	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	431883.8031163128	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	156	1478	35.0	-14	True	AATAAA	-13
PB.8853.9	chr4	-	4440	28	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	4732	junction_26	345098.02507371403	NA	10	NA	TRUE	NA	NA	NA	C	coding	1226	3681	348	4028	20.0	21	True	ATTAAA	-13
PB.8853.8	chr4	-	4413	27	novel_not_in_catalog	SEC31A	novel	1564	8	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	20105	junction_4	353386.21471545636	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	104	3238	20.0	-48	True	ATTAAA	-13
PB.8853.7	chr4	-	4070	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	83080	junction_13	311793.74952592235	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	74	3658	20.0	-15	True	ATTAAA	-13
PB.8853.6	chr4	-	4134	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	133055	junction_6	338433.8405870099	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3585	138	3722	20.0	9348	False	ATTAAA	-13
PB.8853.5	chr4	-	4134	27	full-splice_match	SEC31A	ENST00000395310.6	4259	27	125	0	-5	0	multi-exon	FALSE	canonical	1	369485	junction_13	289306.58689011197	NA	0	NA	TRUE	NA	NA	NA	C	coding	1220	3663	59	3721	15.0	0	True	ATTAAA	-14
PB.8853.4	chr4	-	4125	27	full-splice_match	SEC31A	ENST00000508502.5	3801	27	25	-349	0	0	multi-exon	FALSE	canonical	1	173262	junction_5	309637.59028295043	NA	1	NA	TRUE	NA	NA	NA	C	coding	1205	3618	96	3713	20.0	-37	True	ATTAAA	-13
PB.8853.3	chr4	-	4291	27	full-splice_match	SEC31A	ENST00000508502.5	3801	27	11	-501	-8	151	multi-exon	FALSE	canonical	1	173262	junction_5	309637.59028295043	NA	1	1	TRUE	NA	NA	NA	C	coding	1205	3618	110	3727	45.0	-51	True	AATAAA	-25
PB.8853.2	chr4	-	4336	27	full-splice_match	SEC31A	ENST00000395310.6	4259	27	74	-151	-8	151	multi-exon	FALSE	canonical	1	369485	junction_13	289306.58689011197	NA	1	NA	TRUE	NA	NA	NA	C	coding	1220	3663	110	3772	45.0	-51	True	AATAAA	-25
PB.8853.1	chr4	-	4785	24	full-splice_match	SEC31A	ENST00000513858.5	3687	24	-52	-1046	0	1046	multi-exon	TRUE	canonical	1	277702	junction_5	296740.48341385456	NA	2	NA	TRUE	NA	NA	NA	C	coding	1067	3204	123	3326	55.0	9363	False	NA	NA
PB.864.15	chr1	-	1865	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-9	421	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	3	1	TRUE	NA	NA	NA	B	coding	276	831	80	910	90.0	-10	True	NA	NA
PB.3660.2	chr14	+	4012	22	full-splice_match	EML1	ENST00000262233.10	4535	22	0	523	0	0	multi-exon	FALSE	canonical	1	53193	junction_1	22190.16725750619	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	140	2587	25.0	-5	True	AATAAA	-14
PB.3660.3	chr14	+	3744	22	full-splice_match	EML1	ENST00000262233.10	4535	22	25	766	20	-243	multi-exon	FALSE	canonical	1	53193	junction_1	22190.16725750619	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	115	2562	50.0	-2	True	AATAAA	-9
PB.11867.1	chr9	-	3171	11	full-splice_match	TTF1	ENST00000334270.2	3052	11	-6	-113	-6	40	multi-exon	FALSE	canonical	1	31635	junction_10	47236.654396771155	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	47	2764	40.0	5	True	AATAAA	-12
PB.3660.1	chr14	+	4545	22	full-splice_match	EML1	ENST00000262233.10	4535	22	-14	4	-14	-4	multi-exon	TRUE	canonical	1	53193	junction_1	22190.16725750619	NA	2	1	TRUE	NA	NA	NA	C	coding	815	2448	154	2601	30.0	-89	False	AATGAA	-21
PB.9112.1	chr5	-	4788	3	full-splice_match	CCDC127	ENST00000296824.3	9342	3	39	4515	39	4487	multi-exon	FALSE	canonical	1	227402	junction_2	29958.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	260	783	95	877	10.0	1456	False	ATTAAA	-14
PB.4012.1	chr15	+	3037	8	full-splice_match	DNAJA4	ENST00000343789.7	2961	8	-79	3	-61	1	multi-exon	FALSE	canonical	1	3548	junction_1	106630.89187204884	NA	0	NA	TRUE	NA	NA	NA	A	coding	397	1194	111	1304	10.0	-79	True	ATTAAA	-20
PB.10562.1	chr7	-	2900	3	full-splice_match	ZNF680	ENST00000476563.1	769	3	-84	-2047	0	5	multi-exon	FALSE	canonical	1	8472	junction_2	30020.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	260	1618	30.0	-36	False	ATTAAA	-19
PB.6407.3	chr2	-	7318	6	novel_in_catalog	FAM98A	novel	2816	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	397462	junction_5	43764.12157738345	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	5152	6201	10.0	-1	True	AATAAA	-19
PB.8332.5	chr3	-	2922	16	incomplete-splice_match	POLQ	ENST00000264233.5	8775	30	0	58707	0	31433	3prime_fragment	FALSE	canonical	1	34479	junction_9	6967.050890840081	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2793	130	2922	70.0	0	True	AGTAAA	-38
PB.11690.4	chr9	+	1609	2	incomplete-splice_match	MSANTD3	ENST00000613183.1	1755	3	12389	0	-246	0	5prime_fragment	FALSE	canonical	1	303204	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	37	864	75.0	NA	False	NA	NA
PB.864.10	chr1	-	1963	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-17600	-984	intron_retention	FALSE	non_canonical	0	0	junction_1	399353.54798863514	NA	2	1	TRUE	NA	NA	NA	B	coding	258	777	60	836	30.0	4	True	AATAAA	-18
PB.490.36	chr1	+	6187	1	novel_in_catalog	IFI44L	novel	5874	9	NA	NA	-495	415	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-7480	False	NA	NA
PB.1197.3	chr1	-	4759	1	full-splice_match	EXOC8	ENST00000366645.1	5100	1	-17	358	-17	-358	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	721	2166	137	2302	0.0	30	False	AATATA	-28
PB.490.34	chr1	+	5698	1	novel_in_catalog	IFI44L	novel	1162	8	NA	NA	-1085	95	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	161	486	3332	3817	30.0	1157	False	AATAAA	-13
PB.490.33	chr1	+	2127	10	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	464	-415	any annotated donor/acceptor	FALSE	canonical	1	1675	junction_2	186560.88507971974	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	194	1552	95.0	-3	True	NA	NA
PB.490.32	chr1	+	2427	2	novel_in_catalog	IFI44L	novel	554	3	NA	NA	452	94	intron_retention	FALSE	canonical	1	13228	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	C	coding	161	486	62	547	25.0	-2507	False	AATAAA	-12
PB.490.31	chr1	+	1519	8	novel_in_catalog	IFI44L	novel	554	3	NA	NA	439	415	combination_of_known_junctions	FALSE	canonical	1	16838	junction_1	161281.0391994834	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	361	945	90.0	-2520	False	NA	NA
PB.490.30	chr1	+	2200	9	novel_in_catalog	IFI44L	novel	554	3	NA	NA	431	-231	no_combination_of_known_junctions	FALSE	canonical	1	13228	junction_1	156589.25534559356	NA	1	NA	TRUE	NA	NA	NA	C	coding	452	1359	83	1441	80.0	0	True	NA	NA
PB.1950.6	chr11	+	3475	3	novel_in_catalog	TMX2	novel	696	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	391525	junction_2	325720.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	2630	2977	5.0	14	True	AATAAA	-21
PB.1950.7	chr11	+	1756	8	novel_in_catalog	TMX2	novel	696	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	9708	junction_2	298941.5350596781	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	512	1030	5.0	14	True	AATAAA	-20
PB.1950.4	chr11	+	2416	5	novel_in_catalog	TMX2	novel	696	4	NA	NA	-6	2	intron_retention	FALSE	canonical	1	253274	junction_2	319879.4433900059	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	1572	1919	5.0	1	True	AATAAA	-20
PB.1950.5	chr11	+	1527	7	full-splice_match	TMX2	ENST00000378312.8	1521	7	-7	1	-4	-1	multi-exon	FALSE	canonical	1	162525	junction_2	296394.88832186925	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	24	800	5.0	3	True	AATAAA	-21
PB.1950.2	chr11	+	2649	4	novel_in_catalog	TMX2	novel	696	4	NA	NA	-6	2	intron_retention	FALSE	canonical	1	295279	junction_3	332110.1756556098	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	1805	2152	5.0	1	True	AATAAA	-20
PB.1950.3	chr11	+	2573	4	novel_in_catalog	TMX2	novel	696	4	NA	NA	-6	2	intron_retention	FALSE	canonical	1	113832	junction_2	402112.3189875629	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	1729	2076	5.0	1	True	AATAAA	-20
PB.1950.1	chr11	+	1732	8	full-splice_match	TMX2	ENST00000529403.1	1697	8	-32	-3	-18	-1	multi-exon	FALSE	canonical	1	113832	junction_2	283343.00435035577	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	487	1005	5.0	-11	True	AATAAA	-21
PB.1950.8	chr11	+	1623	8	full-splice_match	TMX2	ENST00000278422.8	1631	8	7	1	0	-1	multi-exon	FALSE	canonical	1	153040	junction_2	278480.26981736254	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	6	896	5.0	21	True	AATAAA	-21
PB.11708.6	chr9	-	6279	35	novel_in_catalog	ELP1	novel	2840	12	NA	NA	0	7	intron_retention	FALSE	canonical	1	114880	junction_34	99914.38473227932	NA	1	1	TRUE	NA	NA	NA	C	coding	983	2952	2847	5798	20.0	-30	True	AATAAA	-20
PB.477.4	chr1	+	3237	6	full-splice_match	TYW3	ENST00000370867.7	3430	6	14	179	14	-179	multi-exon	FALSE	canonical	1	295335	junction_1	46632.11438311585	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	76	855	80.0	18	True	NA	NA
PB.6850.3	chr2	-	4704	8	full-splice_match	WIPF1	ENST00000359761.7	2003	8	-70	-2631	-37	-1	multi-exon	FALSE	canonical	1	75247	junction_7	214815.19339380148	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	219	1730	15.0	-75	False	AATAAA	-16
PB.477.6	chr1	+	2206	5	full-splice_match	TYW3	ENST00000457880.6	3335	5	72	1057	-23	-1057	multi-exon	FALSE	canonical	1	24299	junction_2	158808.7557724699	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	22	702	65.0	19	True	NA	NA
PB.3365.1	chr14	-	2304	11	incomplete-splice_match	PRKD1	ENST00000616995.4	3498	19	292971	4	-67	-2	5prime_fragment	FALSE	canonical	1	59135	junction_7	16638.882821872387	NA	0	NA	TRUE	NA	NA	NA	A	coding	506	1521	29	1549	35.0	NA	False	AATAAA	-14
PB.3937.11	chr15	+	4783	16	incomplete-splice_match	DIS3L	ENST00000319212.8	3647	17	269	-153	-16	-1	5prime_fragment	FALSE	canonical	1	112768	junction_1	39407.51182570823	NA	3	NA	TRUE	NA	NA	NA	C	coding	971	2916	1283	4198	20.0	196	False	AATAAA	-17
PB.3937.10	chr15	+	4245	17	novel_in_catalog	DIS3L	novel	3763	17	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	7222	junction_1	65136.55570079293	NA	2	NA	TRUE	NA	NA	NA	C	coding	971	2916	745	3660	20.0	195	False	AATAAA	-17
PB.477.2	chr1	+	1885	6	full-splice_match	TYW3	ENST00000370867.7	3430	6	-731	2276	-727	-2	multi-exon	FALSE	canonical	1	295335	junction_1	46632.11438311585	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	821	1600	30.0	-1893	False	NA	NA
PB.477.3	chr1	+	2212	6	full-splice_match	TYW3	ENST00000370867.7	3430	6	156	1062	65	-1062	multi-exon	FALSE	canonical	1	295335	junction_1	46632.11438311585	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	666	48	713	70.0	-5	True	NA	NA
PB.1197.2	chr1	-	3494	1	full-splice_match	EXOC8	ENST00000366645.1	5100	1	1604	2	1604	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	152	459	223	681	50.0	1651	False	AATAAA	-23
PB.11591.3	chr9	+	3571	1	full-splice_match	FAM122A	ENST00000394264.5	4575	1	4	1000	4	-1000	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	329	990	2	991	20.0	-27	True	TATAAA	-20
PB.8224.9	chr3	+	1607	9	full-splice_match	MITF	ENST00000531774.1	1074	9	-134	-399	2	0	multi-exon	FALSE	canonical	1	3144	junction_2	43716.605703668254	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	135	1208	90.0	-3	True	NA	NA
PB.8224.8	chr3	+	1735	9	full-splice_match	MITF	ENST00000394351.8	4479	9	55	2689	18	0	multi-exon	FALSE	canonical	1	34134	junction_5	36537.3888484026	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	77	1336	90.0	0	True	NA	NA
PB.1219.23	chr1	-	7631	42	incomplete-splice_match	LYST	ENST00000389793.6	13480	53	74905	1448	-3167	-1439	5prime_fragment	TRUE	canonical	1	78621	junction_39	38683.25338094566	NA	1	NA	TRUE	NA	NA	NA	C	coding	2379	7140	41	7180	75.0	6560	False	NA	NA
PB.4978.3	chr17	-	1762	8	full-splice_match	NT5C3B	ENST00000470690.5	1729	8	-1	-32	-1	5	multi-exon	FALSE	canonical	1	79170	junction_7	223399.82610137018	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	661	1434	60.0	-1	True	AATATA	-26
PB.4978.2	chr17	-	1514	8	full-splice_match	NT5C3B	ENST00000523903.5	1534	8	6	14	6	5	multi-exon	FALSE	canonical	1	457927	junction_7	118543.39257927488	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	308	1186	60.0	18	False	AATATA	-26
PB.4978.1	chr17	-	2666	7	novel_in_catalog	NT5C3B	novel	1028	5	NA	NA	3	8	intron_retention	FALSE	canonical	1	457927	junction_6	112703.1098975682	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	294	911	45.0	-10	True	AATATA	-29
PB.7039.1	chr2	-	2843	4	intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	6185.7835576604375	NA	2	NA	FALSE	NA	NA	NA	A	coding	107	324	127	450	35.0	-1	True	AATAAA	-14
PB.8224.7	chr3	+	1886	10	novel_not_in_catalog	MITF	novel	4814	10	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	240	junction_5	51760.5431609927	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	135	1487	90.0	-3	True	NA	NA
PB.8224.6	chr3	+	2398	9	full-splice_match	MITF	ENST00000314557.10	1798	9	2	-602	2	602	multi-exon	FALSE	canonical	1	36483	junction_1	28602.855573952314	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	135	1376	10.0	-3	True	NA	NA
PB.8224.5	chr3	+	1718	9	full-splice_match	MITF	ENST00000314557.10	1798	9	60	20	18	1	multi-exon	FALSE	canonical	1	36483	junction_1	28602.855573952314	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	77	1318	90.0	0	True	NA	NA
PB.4978.4	chr17	-	1574	9	full-splice_match	NT5C3B	ENST00000469698.5	1573	9	-27	26	-1	-7	multi-exon	FALSE	canonical	1	38314	junction_8	273710.16289121873	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	485	1258	55.0	-1	True	AATATA	-14
PB.10607.14	chr7	+	4549	35	full-splice_match	GTF2I	ENST00000573035.5	4548	35	-3	2	-3	0	multi-exon	FALSE	canonical	1	3722	junction_23	523708.9424612688	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	393	3389	15.0	-4860	False	AATAAA	-25
PB.1197.5	chr1	-	2407	1	full-splice_match	EXOC8	ENST00000366645.1	5100	1	4	2689	4	-2689	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	721	2166	116	2281	80.0	3	True	ATTAAA	-12
PB.10607.15	chr7	+	4387	32	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-76	733	-3	0	intron_retention	FALSE	canonical	1	3722	junction_21	553993.6477799553	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	393	3266	75.0	-4860	False	AAGAAA	-40
PB.9885.1	chr6	-	1809	6	full-splice_match	NEU1	ENST00000375631.4	2045	6	84	152	0	-152	multi-exon	FALSE	canonical	1	522532	junction_3	162182.86041749295	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	47	1294	15.0	-6	True	AATGAA	-15
PB.2171.1	chr11	-	3945	19	novel_in_catalog	GDPD5	novel	4150	13	NA	NA	-5	0	intron_retention	TRUE	canonical	1	851	junction_18	62381.20376808671	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	1262	3079	15.0	0	True	ATTAAA	-13
PB.2171.2	chr11	-	3810	18	novel_in_catalog	GDPD5	novel	4150	13	NA	NA	-43	0	intron_retention	FALSE	canonical	1	36273	junction_16	55026.512605430216	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	1127	2944	15.0	-10	True	ATTAAA	-13
PB.2171.3	chr11	-	3589	19	novel_in_catalog	GDPD5	novel	4150	13	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	5248	junction_18	58964.56681888615	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	906	2723	15.0	-4	True	ATTAAA	-13
PB.2171.4	chr11	-	3555	17	full-splice_match	GDPD5	ENST00000336898.7	3523	17	-33	1	-33	0	multi-exon	FALSE	canonical	1	39229	junction_15	52922.95908437182	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	872	2689	15.0	0	True	ATTAAA	-13
PB.2171.5	chr11	-	3148	18	novel_not_in_catalog	GDPD5	novel	4150	13	NA	NA	-1576	0	any annotated donor/acceptor	FALSE	canonical	1	758	junction_17	59040.904454594944	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	465	2282	15.0	-1569	False	ATTAAA	-13
PB.2171.6	chr11	-	3810	20	novel_not_in_catalog	GDPD5	novel	4150	13	NA	NA	-23	-1	any annotated donor/acceptor	FALSE	canonical	1	328	junction_17	64470.9521985722	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	1128	2945	15.0	10	True	ATTAAA	-12
PB.7215.7	chr20	+	2055	8	novel_not_in_catalog	GINS1	novel	3249	7	NA	NA	-19	12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	70762.60405621267	NA	3	1	TRUE	NA	NA	NA	C	coding	196	591	114	704	15.0	-21	True	NA	NA
PB.6476.32	chr2	-	2671	15	novel_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-13	-1033	no_combination_of_known_junctions	FALSE	canonical	1	41591	junction_12	132023.0829489754	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	343	2172	20.0	1223	False	ATTAAA	-12
PB.8332.2	chr3	-	4025	16	incomplete-splice_match	POLQ	ENST00000264233.5	8775	30	0	57604	0	32536	3prime_fragment	FALSE	canonical	1	34479	junction_9	6967.050890840081	NA	0	NA	TRUE	NA	NA	NA	C	coding	1298	3894	130	4023	75.0	0	True	AAGAAA	-17
PB.7215.4	chr20	+	2263	8	novel_not_in_catalog	GINS1	novel	3249	7	NA	NA	-44	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	70762.60405621267	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	139	729	25.0	-46	True	NA	NA
PB.2052.1	chr11	+	3668	11	novel_in_catalog	FRMD8	novel	3723	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	826	junction_2	57961.71342015348	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	136	1506	25.0	-10	True	ATTAAA	-14
PB.2052.2	chr11	+	3579	12	novel_not_in_catalog	FRMD8	novel	3723	11	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	55656.66490158157	NA	2	NA	TRUE	NA	NA	NA	C	coding	447	1344	135	1478	25.0	-9	True	ATTAAA	-14
PB.2052.3	chr11	+	3512	10	full-splice_match	FRMD8	ENST00000355991.9	3514	10	0	2	0	-2	multi-exon	FALSE	canonical	1	5465	junction_2	58771.596092073894	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	126	1352	30.0	0	True	ATTAAA	-12
PB.2052.4	chr11	+	3682	11	full-splice_match	FRMD8	ENST00000317568.9	3723	11	39	2	1	1	multi-exon	FALSE	canonical	1	27554	junction_4	52435.020196811216	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	125	1519	25.0	1	True	ATTAAA	-15
PB.2052.5	chr11	+	3579	10	full-splice_match	FRMD8	ENST00000416776.6	1818	10	-19	-1742	1	0	multi-exon	FALSE	canonical	1	17582	junction_3	54277.06216382573	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	125	1417	25.0	1	True	ATTAAA	-14
PB.2052.6	chr11	+	4065	11	novel_not_in_catalog	FRMD8	novel	3723	11	NA	NA	2	-5	any annotated donor/acceptor	FALSE	canonical	1	2182	junction_4	60135.748011395015	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	1594	1908	30.0	2	True	ATTAAA	-9
PB.2052.7	chr11	+	3945	11	novel_not_in_catalog	FRMD8	novel	3723	11	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	1548	junction_4	55762.75578878792	NA	10	NA	TRUE	NA	NA	NA	C	coding	152	459	110	568	25.0	16	True	ATTAAA	-14
PB.2052.8	chr11	+	3779	11	novel_not_in_catalog	FRMD8	novel	3723	11	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	5107	junction_2	57394.26408004549	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	577	1620	30.0	20	True	ATTAAA	-11
PB.7215.2	chr20	+	3314	7	full-splice_match	GINS1	ENST00000262460.4	3249	7	-53	-12	-53	12	multi-exon	FALSE	canonical	1	125833	junction_4	31627.270184657627	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	148	738	15.0	-55	True	NA	NA
PB.9307.2	chr5	-	2985	1	novel_in_catalog	TBCA	novel	683	4	NA	NA	20	-81953	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-5	True	NA	NA
PB.7215.3	chr20	+	3583	9	novel_not_in_catalog	GINS1	novel	3249	7	NA	NA	-44	5	any annotated donor/acceptor	FALSE	canonical	1	994	junction_1	99392.75103220556	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	407	799	25.0	-46	True	NA	NA
PB.592.2	chr1	-	989	9	full-splice_match	PSMA5	ENST00000271308.8	3729	9	-85	2825	-9	-6	multi-exon	FALSE	canonical	1	1610726	junction_8	459250.9459032175	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	107	832	45.0	0	True	AATAAA	-10
PB.996.8	chr1	+	2059	9	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-171	265529	-171	-52725	3prime_fragment	FALSE	canonical	1	26732	junction_1	3813.5252699274197	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	401	1834	25.0	-11	False	NA	NA
PB.996.9	chr1	+	4374	15	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-168	218850	-168	-6046	3prime_fragment	FALSE	canonical	1	26732	junction_1	3577.0268701243826	NA	3	NA	TRUE	NA	NA	NA	C	coding	801	2406	398	2803	15.0	-8	True	AATATA	-25
PB.2640.9	chr12	-	3206	14	novel_in_catalog	CALCOCO1	novel	5866	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	371851	junction_6	123686.82736031973	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	74	1720	35.0	-7	True	AATATA	-15
PB.2640.8	chr12	-	4362	13	novel_not_in_catalog	CALCOCO1	novel	5866	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	2664	junction_12	242055.90527687964	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	70	918	35.0	-6	True	AATATA	-15
PB.2640.7	chr12	-	4635	12	novel_in_catalog	CALCOCO1	novel	5866	15	NA	NA	3	0	intron_retention	FALSE	canonical	1	371851	junction_4	125665.35476651884	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	58	1479	35.0	9	True	AATATA	-15
PB.2640.6	chr12	-	3006	16	novel_in_catalog	CALCOCO1	novel	5866	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	29360	junction_1	208986.62611558026	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	74	2221	25.0	-7	True	AATAAA	-19
PB.2640.5	chr12	-	3951	14	full-splice_match	CALCOCO1	ENST00000548263.5	3888	14	-22	-41	1	1	multi-exon	FALSE	canonical	1	371851	junction_6	125345.05607619937	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	72	1973	30.0	-5	True	AATATA	-16
PB.2640.4	chr12	-	4143	13	novel_in_catalog	CALCOCO1	novel	5866	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	371851	junction_5	125720.31343908678	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	73	1719	25.0	-6	True	AATAAA	-19
PB.2640.3	chr12	-	2591	14	novel_not_in_catalog	CALCOCO1	novel	5866	15	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	183178.4935328019	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	73	1764	30.0	-6	True	AATATA	-17
PB.2640.2	chr12	-	3051	16	novel_in_catalog	CALCOCO1	novel	5866	15	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	10390	junction_15	215829.90489317174	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	148	2223	30.0	-11	True	AATATA	-18
PB.2640.1	chr12	-	2947	15	full-splice_match	CALCOCO1	ENST00000550804.5	2291	15	-25	-631	2	0	multi-exon	FALSE	canonical	1	371851	junction_7	123000.69034742803	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	87	2162	25.0	-20	True	AATAAA	-19
PB.621.3	chr1	-	3367	5	full-splice_match	SLC16A1	ENST00000369626.7	3910	5	158	385	-14	-380	multi-exon	FALSE	canonical	1	712275	junction_4	230041.21876089944	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	206	1708	30.0	-1	True	ATTAAA	-22
PB.8171.3	chr3	-	7977	31	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-28	-16	combination_of_known_junctions	FALSE	canonical	1	41118	junction_4	70363.68649031024	NA	18	NA	TRUE	NA	NA	NA	B	coding	1689	5070	213	5282	25.0	-33	True	AATAAA	-19
PB.592.1	chr1	-	3801	9	full-splice_match	PSMA5	ENST00000271308.8	3729	9	-83	11	-7	-11	multi-exon	FALSE	canonical	1	1610726	junction_8	459250.9459032175	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	105	830	25.0	2	True	ATTAAA	-17
PB.8171.6	chr3	-	7324	30	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-39	-515	combination_of_known_junctions	FALSE	canonical	1	44547	junction_29	58916.650897738116	NA	0	NA	TRUE	NA	NA	NA	B	coding	1634	4905	224	5128	80.0	-44	True	NA	NA
PB.8171.7	chr3	-	7107	29	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-13	-515	combination_of_known_junctions	FALSE	canonical	1	44547	junction_28	62291.45719940664	NA	5	NA	TRUE	NA	NA	NA	B	coding	1582	4749	163	4911	80.0	17	False	NA	NA
PB.8171.4	chr3	-	7819	30	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-35	-16	combination_of_known_junctions	FALSE	canonical	1	44547	junction_29	58916.650897738116	NA	0	NA	TRUE	NA	NA	NA	B	coding	1634	4905	220	5124	25.0	-40	True	AATAAA	-19
PB.8171.5	chr3	-	7703	30	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-39	-136	combination_of_known_junctions	FALSE	canonical	1	44547	junction_29	58916.650897738116	NA	0	NA	TRUE	NA	NA	NA	B	coding	1634	4905	224	5128	30.0	-44	True	ATTAAA	-15
PB.8187.5	chr3	-	5438	24	novel_in_catalog	FAM208A	novel	5099	7	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	67619	junction_1	78930.79683879294	NA	2	NA	TRUE	NA	NA	NA	B	coding	1670	5013	249	5261	30.0	10	True	AATAAA	-17
PB.8187.4	chr3	-	5674	25	novel_not_in_catalog	FAM208A	novel	5099	7	NA	NA	-44	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	93833.2255795618	NA	0	NA	TRUE	NA	NA	NA	B	coding	1512	4539	208	4746	30.0	-17	True	AATAAA	-17
PB.8187.7	chr3	-	5251	24	novel_not_in_catalog	FAM208A	novel	5099	7	NA	NA	-28	-1	any annotated donor/acceptor	FALSE	canonical	1	177	junction_23	92522.35083867333	NA	0	NA	TRUE	NA	NA	NA	B	coding	1328	3987	337	4323	30.0	-1	True	AATAAA	-17
PB.8187.6	chr3	-	5361	24	novel_in_catalog	FAM208A	novel	5099	7	NA	NA	-63	-1	combination_of_known_junctions	FALSE	canonical	1	67619	junction_1	85678.29767095084	NA	1	NA	TRUE	NA	NA	NA	B	coding	1629	4890	295	5184	30.0	-36	False	AATAAA	-17
PB.3118.4	chr13	+	3564	19	full-splice_match	COG6	ENST00000455146.7	3563	19	3	-4	3	4	multi-exon	FALSE	canonical	1	119972	junction_12	50832.76620318123	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	48	2021	25.0	18	True	AATAAA	-22
PB.3118.5	chr13	+	2423	19	full-splice_match	COG6	ENST00000455146.7	3563	19	7	1133	7	-1001	multi-exon	FALSE	canonical	1	119972	junction_12	50832.76620318123	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	44	2017	25.0	22	True	AATAAA	-13
PB.3118.6	chr13	+	3422	19	full-splice_match	COG6	ENST00000455146.7	3563	19	9	132	9	0	multi-exon	FALSE	canonical	1	119972	junction_12	50832.76620318123	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	42	2015	40.0	24	True	AATAAA	-18
PB.3118.7	chr13	+	3528	20	novel_not_in_catalog	COG6	novel	5257	19	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	5195	junction_18	78094.79123223679	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	13	2121	40.0	-57	False	AATAAA	-18
PB.1736.2	chr11	+	3319	14	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-40	4	intron_retention	FALSE	canonical	1	43522	junction_1	199360.6488307978	NA	0	NA	TRUE	NA	NA	NA	B	coding	737	2214	168	2381	10.0	-70	False	ATTAAA	-33
PB.3118.2	chr13	+	3059	19	full-splice_match	COG6	ENST00000455146.7	3563	19	15	489	15	-357	multi-exon	FALSE	canonical	1	119972	junction_12	50832.76620318123	NA	2	NA	TRUE	NA	NA	NA	C	coding	657	1974	36	2009	60.0	30	True	AATAAA	-30
PB.3118.3	chr13	+	3501	20	full-splice_match	COG6	ENST00000356576.8	3449	20	-52	0	-5	0	multi-exon	FALSE	canonical	1	2159	junction_1	78699.38195275204	NA	2	NA	TRUE	NA	NA	NA	C	coding	605	1818	277	2094	40.0	10	True	AATAAA	-18
PB.6476.39	chr2	-	2427	14	incomplete-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-39	16034	-33	3617	3prime_fragment	FALSE	canonical	1	188789	junction_5	87129.37776574647	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2064	363	2426	60.0	-1	True	AAGAAA	-19
PB.6918.11	chr2	-	2987	18	novel_not_in_catalog	GTF3C3	novel	4282	18	NA	NA	1	196	any annotated donor/acceptor	FALSE	canonical	1	1976	junction_17	125888.47022615833	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	741	2807	40.0	-47	True	NA	NA
PB.3501.11	chr14	+	2521	9	novel_not_in_catalog	CHURC1-FNTB	novel	1847	13	NA	NA	91451	847	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62194.136202574395	NA	1	1	TRUE	NA	NA	NA	C	coding	245	738	446	1183	15.0	-136	False	AATAAA	-15
PB.8659.5	chr4	-	5224	2	full-splice_match	TMEM129	ENST00000476253.1	958	2	-3354	-912	68	0	multi-exon	FALSE	canonical	1	315051	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	2652	3116	10.0	-11	True	AATAAA	-16
PB.8659.4	chr4	-	2569	3	full-splice_match	TMEM129	ENST00000303277.6	2678	3	107	2	80	-1	multi-exon	FALSE	canonical	1	50509	junction_1	78343.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	415	1113	10.0	1	True	AATAAA	-15
PB.8659.3	chr4	-	2307	4	full-splice_match	TMEM129	ENST00000382936.7	2810	4	503	0	-47	0	multi-exon	FALSE	canonical	1	207196	junction_3	67134.95247799184	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	211	1080	10.0	494	False	AATAAA	-16
PB.8659.2	chr4	-	3006	4	novel_not_in_catalog	TMEM129	novel	2678	3	NA	NA	-2	0	intron_retention	TRUE	canonical	1	11001	junction_3	157485.37532383407	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	910	1779	10.0	-11	True	AATAAA	-16
PB.8659.1	chr4	-	3140	2	novel_in_catalog	TMEM129	novel	2678	3	NA	NA	232	-1	intron_retention	FALSE	canonical	1	207196	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	263	946	10.0	7	True	AATAAA	-15
PB.16.3	chr1	+	1939	3	full-splice_match	CPTP	ENST00000343938.8	2190	3	249	2	-225	-2	multi-exon	FALSE	canonical	1	236045	junction_2	244.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	163	807	10.0	-8092	False	AATAAA	-36
PB.7184.3	chr20	+	1699	4	full-splice_match	DSTN	ENST00000246069.11	3617	4	241	1677	14	0	multi-exon	FALSE	canonical	1	1601361	junction_1	740668.0546755672	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	106	603	15.0	-15	True	AATAAA	-19
PB.7184.2	chr20	+	1448	4	full-splice_match	DSTN	ENST00000246069.11	3617	4	243	1926	16	-249	multi-exon	FALSE	canonical	1	1601361	junction_1	740668.0546755672	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	104	601	40.0	-13	True	AATAAA	-7
PB.7184.1	chr20	+	1638	5	full-splice_match	DSTN	ENST00000474024.5	1853	5	-34	249	-34	-249	multi-exon	FALSE	canonical	1	81678	junction_1	1425427.109886257	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	345	791	40.0	-71	True	AATAAA	-7
PB.11647.14	chr9	-	3008	12	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	-1	1188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	71710.24785935122	NA	0	NA	TRUE	NA	NA	NA	B	coding	964	2892	115	3006	55.0	-22	True	AAAAAG	-13
PB.11594.12	chr9	+	2965	19	full-splice_match	TJP2	ENST00000636247.1	3725	19	-5	765	-5	-673	multi-exon	FALSE	canonical	1	119621	junction_1	129713.18608571055	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2880	85	2964	20.0	7	True	NA	NA
PB.11647.12	chr9	-	3106	12	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	76452.03406393055	NA	1	NA	TRUE	NA	NA	NA	B	coding	964	2892	213	3104	55.0	6	True	AAAAAG	-13
PB.11594.10	chr9	+	4408	23	novel_not_in_catalog	AL358113.1	novel	4322	24	NA	NA	138451	15	any annotated donor/acceptor	FALSE	canonical	1	1224	junction_20	150782.8506575648	NA	0	NA	TRUE	NA	NA	NA	B	coding	1006	3021	138	3158	15.0	-46	True	AATAAA	-22
PB.11594.11	chr9	+	4509	23	full-splice_match	TJP2	ENST00000377245.9	4503	23	-13	7	-13	0	multi-exon	FALSE	canonical	1	119621	junction_1	125514.81588701325	NA	1	NA	TRUE	NA	NA	NA	C	coding	1190	3573	110	3682	15.0	-18	True	AATAAA	-21
PB.4722.35	chr17	+	2522	12	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	132	0	intron_retention	FALSE	canonical	1	2320013	junction_1	497745.6014758397	NA	4	NA	TRUE	NA	NA	NA	C	coding	270	813	1542	2354	10.0	-2048	False	AATAAA	-16
PB.1574.1	chr10	+	1654	3	full-splice_match	UBTD1	ENST00000370664.3	1706	3	47	5	47	-5	multi-exon	FALSE	canonical	1	229270	junction_2	39.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	227	684	290	973	10.0	-11	True	AATAAA	-16
PB.1107.2	chr1	-	7784	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	91	-1	combination_of_known_junctions	FALSE	canonical	1	4486	junction_7	104160.76713517187	NA	4	1	TRUE	NA	NA	NA	C	coding	370	1113	231	1343	15.0	-5	True	AATAAA	-16
PB.11647.18	chr9	-	2831	11	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	4	1188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	86085.2539325987	NA	1	1	TRUE	NA	NA	NA	B	coding	896	2688	142	2829	55.0	209	False	AAAAAG	-13
PB.2346.1	chr11	+	3262	3	full-splice_match	AP000866.1	ENST00000529392.1	2792	3	-470	0	-10	0	multi-exon	TRUE	canonical	1	7498	junction_2	4240.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	890	False	NA	NA
PB.2346.2	chr11	+	3303	1	genic	AP000866.1	novel	NA	NA	NA	NA	-7	-3000	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	135	408	2323	2730	35.0	893	False	NA	NA
PB.8523.3	chr3	-	4045	5	novel_not_in_catalog	NCEH1	novel	4687	5	NA	NA	-12	-12	any annotated donor/acceptor	FALSE	canonical	1	2773	junction_4	90109.4827178999	NA	2	1	TRUE	NA	NA	NA	C	coding	275	828	400	1227	15.0	0	True	AATAAA	-16
PB.11788.2	chr9	+	1473	8	full-splice_match	RABEPK	ENST00000373538.7	1504	8	-16	47	-16	-47	multi-exon	FALSE	canonical	1	326346	junction_3	100472.09177169346	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	327	1445	35.0	2	True	AATAAA	-25
PB.4542.1	chr16	-	2517	4	full-splice_match	TXNL4B	ENST00000268483.7	2556	4	38	1	38	-1	multi-exon	FALSE	canonical	1	162787	junction_1	27173.201778386163	NA	1	NA	TRUE	NA	NA	NA	A	coding	149	450	285	734	10.0	1	True	NA	NA
PB.3178.8	chr13	+	3967	2	full-splice_match	ALG11	ENST00000523764.1	1404	2	0	-2563	0	49	multi-exon	FALSE	canonical	1	37877	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	552	2852	85.0	-13	True	NA	NA
PB.11230.8	chr8	-	2390	8	full-splice_match	PIP4P2	ENST00000518869.1	841	8	-14	-1535	-14	-480	multi-exon	FALSE	canonical	1	16485	junction_7	115652.01807127788	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	606	989	35.0	-38	True	AATAAA	-12
PB.3114.11	chr13	+	2588	3	full-splice_match	UFM1	ENST00000494372.1	777	3	5	-1816	3	1816	multi-exon	FALSE	canonical	1	475183	junction_2	118441.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.8829.12	chr4	-	2147	22	full-splice_match	SDAD1	ENST00000356260.9	3017	22	12	858	-3	-488	multi-exon	FALSE	canonical	1	96282	junction_6	58771.294227223356	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2040	108	2147	75.0	-10	True	NA	NA
PB.747.22	chr1	-	2055	11	novel_in_catalog	RFX5	novel	3576	11	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	1	62823	junction_10	127517.73644748404	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1791	265	2055	20.0	360	False	AATAAA	-13
PB.10177.12	chr6	+	3919	6	novel_not_in_catalog	DSE	novel	1130	4	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	16406	junction_2	49912.74862156962	NA	3	NA	TRUE	NA	NA	NA	C	coding	771	2316	672	2987	20.0	114	False	AATAAA	-14
PB.11284.12	chr8	-	4313	13	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	1	9003	junction_11	466348.80663428555	NA	2	NA	TRUE	NA	NA	NA	C	coding	448	1347	758	2104	15.0	-1	True	GATAAA	-15
PB.11988.3	chrX	-	2834	10	novel_in_catalog	RBBP7	novel	373	5	NA	NA	37	-5	intron_retention	FALSE	canonical	1	1349936	junction_8	342057.09057244944	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	255	1016	40.0	4958	False	AATAAA	-6
PB.11988.2	chrX	-	3317	9	novel_in_catalog	RBBP7	novel	373	5	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	1349936	junction_7	347914.83442645037	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	310	1071	40.0	4903	False	AATAAA	-6
PB.11988.1	chrX	-	2282	12	full-splice_match	RBBP7	ENST00000380087.6	2333	12	52	-1	-1	1	multi-exon	FALSE	canonical	1	1349936	junction_10	314505.3651904897	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	310	1587	35.0	4903	False	AATAAA	-21
PB.10177.13	chr6	+	3642	5	novel_not_in_catalog	DSE	novel	1130	4	NA	NA	-3847	12	any annotated donor/acceptor	FALSE	canonical	1	5742	junction_1	46660.285184512104	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	383	2698	10.0	-6940	False	AATAAA	-26
PB.11988.7	chrX	-	2020	12	novel_in_catalog	RBBP7	novel	373	5	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	24346	junction_5	725286.2049273837	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	310	1644	40.0	4903	False	AATAAA	-6
PB.11988.6	chrX	-	2013	12	full-splice_match	RBBP7	ENST00000380084.8	2036	12	18	5	18	-5	multi-exon	FALSE	canonical	1	81417	junction_11	562767.973002996	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	228	1637	40.0	-17	True	AATAAA	-6
PB.2330.1	chr11	+	4270	8	full-splice_match	TBCEL	ENST00000422003.6	5142	8	-35	907	-7	261	multi-exon	FALSE	canonical	1	34106	junction_1	48249.68417365178	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	224	1498	70.0	-27	True	NA	NA
PB.11988.4	chrX	-	2769	11	novel_in_catalog	RBBP7	novel	373	5	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	1349936	junction_9	326465.83012413414	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	310	1071	40.0	4903	False	AATAAA	-6
PB.10177.14	chr6	+	3396	4	novel_not_in_catalog	DSE	novel	1130	4	NA	NA	-3822	-1	any annotated donor/acceptor	FALSE	canonical	1	5742	junction_1	56806.3828338565	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1041	2465	20.0	-6915	False	AATAAA	-13
PB.11988.9	chrX	-	1912	12	full-splice_match	RBBP7	ENST00000404022.5	1904	12	23	-31	6	-5	multi-exon	FALSE	canonical	1	47754	junction_9	572335.6275184681	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	286	1536	40.0	-7	True	AATAAA	-6
PB.11988.8	chrX	-	1980	12	novel_in_catalog	RBBP7	novel	373	5	NA	NA	24	-5	combination_of_known_junctions	FALSE	canonical	1	47754	junction_9	715496.378395822	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	222	1604	40.0	-11	True	AATAAA	-6
PB.8204.1	chr3	-	3258	17	full-splice_match	C3orf67	ENST00000482387.6	3314	17	50	6	-9	-6	multi-exon	FALSE	canonical	1	8123	junction_5	8051.165978252778	NA	1	NA	TRUE	NA	NA	NA	C	coding	814	2445	370	2814	50.0	24	True	AATAAA	-11
PB.5386.3	chr18	+	3678	5	novel_not_in_catalog	TWSG1	novel	2311	7	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	619	junction_1	220375.08590057882	NA	4	NA	TRUE	NA	NA	NA	C	coding	209	630	157	786	20.0	0	True	AATAAA	-12
PB.3500.1	chr14	+	4945	18	novel_not_in_catalog	PLEKHG3	novel	635	5	NA	NA	-12	1	any annotated donor/acceptor	TRUE	canonical	1	46702	junction_15	52569.73495440576	NA	1	NA	TRUE	NA	NA	NA	A	coding	1340	4023	282	4304	20.0	0	True	NA	NA
PB.8204.2	chr3	-	3619	7	incomplete-splice_match	C3orf67	ENST00000482387.6	3314	17	47	140003	9	5333	3prime_fragment	FALSE	canonical	1	11001	junction_1	8211.306387130693	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	373	1107	5.0	21	True	CATAAA	-4
PB.1219.24	chr1	-	8733	32	incomplete-splice_match	LYST	ENST00000389793.6	13480	53	-22	73441	-18	3508	3prime_fragment	FALSE	canonical	1	78139	junction_21	28587.599571112878	NA	3	NA	TRUE	NA	NA	NA	C	coding	2845	8535	198	8732	40.0	5351	False	ATTAAA	-14
PB.6638.13	chr2	-	5179	22	novel_in_catalog	KANSL3	novel	5253	21	NA	NA	-3	-28	combination_of_known_junctions	FALSE	canonical	1	15941	junction_16	99040.33698526169	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	818	2770	75.0	-1	True	NA	NA
PB.8966.1	chr4	+	3540	17	incomplete-splice_match	KIAA1109	ENST00000306802.8	4650	24	11861	2	232	0	5prime_fragment	TRUE	canonical	1	169948	junction_2	54960.1290844952	NA	2	NA	TRUE	NA	NA	NA	B	coding	994	2985	53	3037	25.0	NA	False	AATAAA	-17
PB.7610.1	chr22	+	2200	2	full-splice_match	AC000068.1	ENST00000431090.1	2097	2	-77	-26	-77	26	multi-exon	FALSE	canonical	1	4948	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	3	356	75.0	362	False	AATAAA	-45
PB.988.3	chr1	+	3221	6	full-splice_match	C1orf21	ENST00000235307.6	10265	6	53	6991	53	55	multi-exon	FALSE	canonical	1	258703	junction_1	112067.72427849153	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	383	748	15.0	-1	True	CATAAA	-12
PB.988.2	chr1	+	1644	6	full-splice_match	C1orf21	ENST00000235307.6	10265	6	-74	8695	-74	389	multi-exon	FALSE	canonical	1	258703	junction_1	112067.72427849153	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	510	875	10.0	-45	True	AATAAA	-20
PB.988.1	chr1	+	2911	6	novel_not_in_catalog	C1orf21	novel	10265	6	NA	NA	-90	57	any annotated donor/acceptor	FALSE	canonical	1	3191	junction_1	213815.74187734633	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	71	436	10.0	1	True	CATAAA	-14
PB.11112.7	chr8	+	2464	7	novel_in_catalog	VDAC3	novel	719	6	NA	NA	-6	-2	no_combination_of_known_junctions	FALSE	canonical	1	2297	junction_4	320283.8203528326	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	AATAAA	-25
PB.11112.4	chr8	+	2509	9	novel_in_catalog	VDAC3	novel	719	6	NA	NA	5	-27	combination_of_known_junctions	FALSE	canonical	1	497340	junction_4	540153.1100229678	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	103	657	25.0	-11	True	ATTAAA	-15
PB.10276.4	chr6	-	3959	8	full-splice_match	LATS1	ENST00000543571.5	7517	8	177	3381	26	163	multi-exon	FALSE	canonical	1	67931	junction_7	33134.31893221952	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	372	3764	60.0	2	True	TTTAAA	-38
PB.10276.5	chr6	-	2892	5	incomplete-splice_match	LATS1	ENST00000543571.5	7517	8	161	21810	10	2956	3prime_fragment	FALSE	canonical	1	67931	junction_4	36040.76203672031	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2505	388	2892	25.0	-14	True	ATTAAA	-16
PB.10276.6	chr6	-	2501	4	full-splice_match	LATS1	ENST00000392273.7	2567	4	26	40	26	-40	multi-exon	FALSE	canonical	1	67931	junction_3	41408.76662683344	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	372	2444	45.0	2	True	AATAAA	-14
PB.10276.7	chr6	-	2369	4	full-splice_match	LATS1	ENST00000392273.7	2567	4	8	190	8	-190	multi-exon	FALSE	canonical	1	67931	junction_3	41408.76662683344	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1980	390	2369	65.0	-16	True	NA	NA
PB.10276.1	chr6	-	7369	8	full-splice_match	LATS1	ENST00000543571.5	7517	8	147	1	-4	-1	multi-exon	FALSE	canonical	1	67931	junction_7	33134.31893221952	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	402	3794	35.0	8285	False	AATAAA	-19
PB.10276.3	chr6	-	6502	8	full-splice_match	LATS1	ENST00000543571.5	7517	8	155	860	4	-860	multi-exon	FALSE	canonical	1	67931	junction_7	33134.31893221952	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	394	3786	70.0	8293	False	NA	NA
PB.10276.8	chr6	-	3009	1	novel_in_catalog	LATS1	novel	7517	8	NA	NA	6	-30687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-18	True	NA	NA
PB.11708.9	chr9	-	4939	37	novel_not_in_catalog	ELP1	novel	2840	12	NA	NA	-297	6	any annotated donor/acceptor	FALSE	canonical	1	41638	junction_36	106075.09768224873	NA	3	NA	TRUE	NA	NA	NA	C	coding	1218	3657	803	4459	20.0	-327	False	AATAAA	-19
PB.458.4	chr1	+	3438	8	incomplete-splice_match	PDE4B	ENST00000371045.9	3982	10	179	4429	-6	1993	intron_retention	FALSE	canonical	1	174070	junction_5	52088.73574537033	NA	5	NA	TRUE	NA	NA	NA	C	coding	388	1167	208	1374	100.0	-11	True	NA	NA
PB.358.6	chr1	+	2489	6	full-splice_match	DPH2	ENST00000255108.7	2472	6	-13	-4	-9	4	multi-exon	FALSE	canonical	1	262590	junction_2	58345.34982190097	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	186	1655	15.0	-19	True	AATAAA	-19
PB.6984.18	chr2	-	5597	8	novel_in_catalog	AC093865.1	novel	433	5	NA	NA	-129954	-422011	no_combination_of_known_junctions	FALSE	canonical	1	19634	junction_7	32972.37054980229	NA	10	NA	TRUE	NA	NA	NA	B	coding	500	1503	103	1605	70.0	980	False	AATGAA	-33
PB.6984.19	chr2	-	5072	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-892	-422045	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	4	NA	TRUE	NA	NA	NA	B	coding	300	903	212	1114	50.0	-18	True	AATAAA	-14
PB.358.7	chr1	+	2588	6	novel_in_catalog	DPH2	novel	593	3	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	1	5698	junction_2	144406.47439917646	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	873	1763	0.0	-18	True	AATAAA	-10
PB.6984.13	chr2	-	4846	2	incomplete-splice_match	IKZF2	ENST00000451136.6	9344	8	129488	3677	-6843	1995	5prime_fragment	FALSE	canonical	1	8261	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	252	759	96	854	70.0	-4	True	AATGAA	-33
PB.6984.16	chr2	-	5642	9	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-129086	-422011	any annotated donor/acceptor	FALSE	canonical	1	9205	junction_8	36865.61851424034	NA	1	NA	TRUE	NA	NA	NA	B	coding	506	1521	130	1650	70.0	4	True	AATGAA	-33
PB.358.4	chr1	+	2515	5	incomplete-splice_match	DPH2	ENST00000495421.1	2414	6	-23	2	-13	-2	intron_retention	FALSE	canonical	1	41080	junction_1	122993.6059687149	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	366	1625	5.0	-23	True	AATAAA	-13
PB.5637.9	chr19	-	3490	8	novel_in_catalog	SAFB2	novel	3371	21	NA	NA	-42	-4416	intron_retention	FALSE	canonical	1	35272	junction_4	217605.9556481647	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	104	670	55.0	-43	False	AAAAAG	-28
PB.3886.1	chr15	-	3978	19	novel_not_in_catalog	PRTG	novel	11967	20	NA	NA	-13	-10165	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	15989.859416629659	NA	2	NA	TRUE	NA	NA	NA	A	coding	1054	3165	218	3382	30.0	-9	True	AATAAA	-27
PB.9617.16	chr5	-	4245	13	novel_in_catalog	FBXW11	novel	4539	13	NA	NA	-3	-160	combination_of_known_junctions	FALSE	canonical	1	23276	junction_11	93409.60470701518	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	496	1830	70.0	-6	True	NA	NA
PB.358.5	chr1	+	3217	3	novel_in_catalog	DPH2	novel	593	3	NA	NA	-12	2	intron_retention	FALSE	canonical	1	378307	junction_1	17893.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	1297	2385	10.0	-22	True	AATAAA	-17
PB.9617.10	chr5	-	4096	13	full-splice_match	FBXW11	ENST00000296933.10	4539	13	230	213	-3	-210	multi-exon	FALSE	canonical	1	66815	junction_12	82545.38258941764	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	142	1731	40.0	-6	True	AATAAA	-29
PB.9617.11	chr5	-	4104	12	full-splice_match	FBXW11	ENST00000393802.6	2181	12	-14	-1909	-5	-160	multi-exon	FALSE	canonical	1	83976	junction_11	73114.78246672847	NA	6	NA	TRUE	NA	NA	NA	C	coding	508	1527	163	1689	70.0	5	True	NA	NA
PB.542.2	chr1	+	2128	14	novel_in_catalog	CCDC18	novel	4867	29	NA	NA	2	5058	no_combination_of_known_junctions	FALSE	canonical	1	6040	junction_1	22951.0361473439	NA	0	NA	TRUE	NA	NA	NA	B	coding	376	1128	1001	2128	40.0	2	True	NA	NA
PB.11875.6	chr9	-	3476	18	full-splice_match	RALGDS	ENST00000372062.8	2919	18	-34	-523	-34	-116	multi-exon	FALSE	canonical	1	10717	junction_17	157136.7682217736	NA	1	NA	TRUE	NA	NA	NA	C	coding	885	2658	69	2726	85.0	8855	False	NA	NA
PB.6782.8	chr2	-	3482	15	novel_not_in_catalog	STAM2	novel	5701	14	NA	NA	-5	-1797	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	74858.59789248374	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	113	1690	30.0	7	True	AATAAA	-20
PB.9617.18	chr5	-	3575	12	full-splice_match	FBXW11	ENST00000393802.6	2181	12	0	-1394	0	-675	multi-exon	FALSE	canonical	1	83976	junction_11	73114.78246672847	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	149	1675	20.0	-13	True	AATAAA	-26
PB.11549.16	chr9	+	3250	5	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	251	0	combination_of_known_junctions	FALSE	canonical	1	46603	junction_2	70893.75572070858	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	63	1433	100.0	8	True	NA	NA
PB.358.3	chr1	+	2520	6	novel_in_catalog	DPH2	novel	593	3	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	5797	junction_3	144511.0539957411	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	665	1690	10.0	-23	True	AATAAA	-15
PB.11549.17	chr9	+	3440	7	full-splice_match	DCAF10	ENST00000377724.7	3862	7	422	0	370	0	multi-exon	FALSE	canonical	1	129259	junction_1	29655.222495371705	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	385	1623	100.0	127	False	NA	NA
PB.1445.1	chr10	+	3534	18	novel_not_in_catalog	HK1	novel	3835	21	NA	NA	-707	0	any annotated donor/acceptor	FALSE	canonical	1	7857	junction_1	340239.9423817517	NA	1	NA	TRUE	NA	NA	NA	C	coding	889	2670	121	2790	35.0	-713	False	AGTAAA	-15
PB.11875.4	chr9	-	3466	18	novel_not_in_catalog	RALGDS	novel	5596	12	NA	NA	4625	-1	any annotated donor/acceptor	FALSE	canonical	1	124	junction_17	187935.73084263777	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	554	1660	20.0	8084	False	ATTAAA	-16
PB.1445.3	chr10	+	3547	18	full-splice_match	HK1	ENST00000359426.6	3605	18	6	52	-3	-34	multi-exon	FALSE	canonical	1	478520	junction_1	254801.12784194935	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2754	99	2852	10.0	0	True	GATAAA	-41
PB.1445.2	chr10	+	3365	17	novel_in_catalog	HK1	novel	3835	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	15142	junction_16	380741.3992408225	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	102	2621	35.0	-3	True	AGTAAA	-15
PB.11549.10	chr9	+	2997	7	novel_not_in_catalog	DCAF10	novel	3862	7	NA	NA	243	707	any annotated donor/acceptor	FALSE	canonical	1	21565	junction_6	45514.209553171415	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	71	1750	30.0	0	True	TATAAA	-15
PB.358.1	chr1	+	2449	6	full-splice_match	DPH2	ENST00000495421.1	2414	6	-31	-4	-21	4	multi-exon	FALSE	canonical	1	41080	junction_1	130300.89874809	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	374	1615	15.0	-31	True	AATAAA	-19
PB.11549.11	chr9	+	2053	6	novel_in_catalog	DCAF10	novel	3862	7	NA	NA	243	568	combination_of_known_junctions	FALSE	canonical	1	46603	junction_2	55493.18537766596	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	71	1552	25.0	0	True	AATAAA	-22
PB.1544.5	chr10	+	3567	22	full-splice_match	EXOC6	ENST00000260762.10	3564	22	-7	4	-7	-4	multi-exon	FALSE	canonical	1	115180	junction_1	21408.830762486305	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	22	2436	35.0	-8	True	ATTAAA	-20
PB.1544.4	chr10	+	3523	21	novel_not_in_catalog	EXOC6	novel	3564	22	NA	NA	-15	-5	any annotated donor/acceptor	FALSE	canonical	1	828	junction_2	47075.01912530148	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	30	2393	35.0	-16	True	ATTAAA	-19
PB.1544.6	chr10	+	3589	22	novel_not_in_catalog	EXOC6	novel	3564	22	NA	NA	-4	-4	any annotated donor/acceptor	FALSE	canonical	1	189	junction_21	39009.775039822984	NA	1	NA	TRUE	NA	NA	NA	C	coding	768	2307	19	2325	35.0	-5	True	ATTAAA	-20
PB.1544.1	chr10	+	3721	22	novel_not_in_catalog	EXOC6	novel	3564	22	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	2171	junction_1	38239.438270845996	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	310	2583	25.0	5	True	ATTAAA	-27
PB.5400.1	chr18	+	2125	4	full-splice_match	TUBB6	ENST00000586653.5	788	4	-35	-1302	-26	6	multi-exon	FALSE	canonical	1	34838	junction_3	863747.7938659076	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	784	1686	20.0	-350	False	AATAAA	-21
PB.1544.3	chr10	+	3509	21	novel_in_catalog	EXOC6	novel	3564	22	NA	NA	13	-5	no_combination_of_known_junctions	FALSE	canonical	1	2314	junction_11	39823.09114634372	NA	2	2	TRUE	NA	NA	NA	C	coding	780	2343	37	2379	35.0	-23	True	ATTAAA	-19
PB.1544.2	chr10	+	2693	21	novel_not_in_catalog	EXOC6	novel	3564	22	NA	NA	11	-4203	any annotated donor/acceptor	FALSE	canonical	1	945	junction_20	48528.511729085614	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	39	2240	15.0	-25	True	NA	NA
PB.11536.9	chr9	-	1901	8	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	-2	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	66551.17906191153	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	173	1306	20.0	-3	True	AATAAA	-16
PB.11549.13	chr9	+	4173	7	novel_not_in_catalog	DCAF10	novel	3862	7	NA	NA	244	0	any annotated donor/acceptor	FALSE	canonical	1	21565	junction_6	45514.209553171415	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	70	1749	100.0	1	True	NA	NA
PB.11604.20	chr9	-	1385	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	-16	1416	-16	-41	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	665	1306	10.0	-6	True	ATTAAA	-16
PB.10248.3	chr6	+	6871	25	full-splice_match	ADGRG6	ENST00000296932.12	6849	25	-6	-16	-6	-2	multi-exon	FALSE	canonical	1	44394	junction_5	31003.718954680797	NA	0	NA	TRUE	NA	NA	NA	C	coding	1193	3582	408	3989	30.0	-754	False	AATAAA	-31
PB.10248.2	chr6	+	4587	25	full-splice_match	ADGRG6	ENST00000296932.12	6849	25	-31	2293	-31	172	multi-exon	FALSE	canonical	1	44394	junction_5	31003.718954680797	NA	8	2	TRUE	NA	NA	NA	C	coding	1193	3582	433	4014	30.0	-3	True	AATAAA	-26
PB.10248.1	chr6	+	7012	26	full-splice_match	ADGRG6	ENST00000230173.10	7026	26	12	2	7	-2	multi-exon	TRUE	canonical	1	56269	junction_6	31584.727478957295	NA	0	NA	TRUE	NA	NA	NA	C	coding	1221	3666	465	4130	30.0	4	True	AATAAA	-31
PB.10248.4	chr6	+	4545	26	full-splice_match	ADGRG6	ENST00000230173.10	7026	26	176	2305	80	178	multi-exon	FALSE	canonical	1	56269	junction_6	31584.727478957295	NA	0	NA	TRUE	NA	NA	NA	C	coding	1221	3666	301	3966	15.0	-4	True	AATAAA	-32
PB.1219.28	chr1	-	5312	13	incomplete-splice_match	LYST	ENST00000489585.5	7069	23	26	29427	2	-1532	3prime_fragment	FALSE	canonical	1	9706	junction_12	44030.77965185264	NA	1	NA	TRUE	NA	NA	NA	C	coding	1564	4695	526	5220	55.0	-1	True	AATAAA	-14
PB.597.11	chr1	+	2195	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	4	24975	4	-24975	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	107	1171	10.0	-20	True	NA	NA
PB.458.1	chr1	+	3571	10	full-splice_match	PDE4B	ENST00000371045.9	3982	10	410	1	225	-1	multi-exon	FALSE	canonical	1	174070	junction_5	56670.58511441254	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	40	1671	20.0	0	True	AATAAA	-19
PB.6338.43	chr2	-	4992	21	full-splice_match	PUM2	ENST00000403432.5	3594	21	-148	-1250	0	-196	multi-exon	FALSE	canonical	1	242233	junction_9	196833.014489408	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	273	3467	35.0	-17	True	ATTAAA	-24
PB.1026.2	chr1	-	5250	30	full-splice_match	KIF14	ENST00000367350.4	7274	30	-8	2032	-8	-2032	multi-exon	FALSE	canonical	1	30651	junction_29	23797.68024056846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1601	4803	448	5250	60.0	8	True	AAGAAA	-45
PB.9581.12	chr5	+	5248	4	novel_in_catalog	MFAP3	novel	643	3	NA	NA	2	2400	combination_of_known_junctions	FALSE	canonical	1	3604	junction_2	1310.7450807333464	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	716	1528	35.0	-13	False	ATTAAA	-14
PB.849.17	chr1	-	2725	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	2	-185	intron_retention	FALSE	canonical	1	127849	junction_12	219647.10124441975	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	78	1871	45.0	49	False	ATTAAA	-17
PB.6191.4	chr19	-	3918	5	full-splice_match	ZNF468	ENST00000243639.8	4027	5	30	79	0	-79	multi-exon	FALSE	canonical	1	20929	junction_3	7832.380780292797	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	576	1808	10.0	-1	True	NA	NA
PB.6191.5	chr19	-	3799	4	full-splice_match	ZNF468	ENST00000595646.5	4407	4	2	606	2	-78	multi-exon	FALSE	canonical	1	20929	junction_2	9784.89973831561	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	120	1688	10.0	1	True	NA	NA
PB.6191.2	chr19	-	4210	6	novel_in_catalog	ZNF28	novel	628	4	NA	NA	-55	-24330	no_combination_of_known_junctions	FALSE	canonical	1	21965	junction_3	7167.743605905557	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	690	2099	10.0	-37	False	NA	NA
PB.6191.3	chr19	-	4065	5	novel_in_catalog	ZNF28	novel	628	4	NA	NA	-29	-24331	no_combination_of_known_junctions	FALSE	canonical	1	21965	junction_2	9047.194952027949	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	495	1955	10.0	-11	False	NA	NA
PB.6191.1	chr19	-	4227	6	novel_not_in_catalog	ZNF28	novel	628	4	NA	NA	-17	-24249	any annotated donor/acceptor	FALSE	canonical	1	2393	junction_4	15944.679057290554	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	803	2035	20.0	1	True	NA	NA
PB.806.4	chr1	+	1769	14	novel_in_catalog	MSTO1	novel	983	8	NA	NA	-1	124	combination_of_known_junctions	FALSE	canonical	1	855	junction_2	128085.78923047203	NA	2	1	TRUE	NA	NA	NA	C	coding	559	1680	35	1714	20.0	-2406	False	AATAAA	-17
PB.806.5	chr1	+	2403	14	novel_not_in_catalog	MSTO1	novel	983	8	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	128206.67896346211	NA	2	1	TRUE	NA	NA	NA	C	coding	548	1647	22	1668	35.0	-2393	False	NA	NA
PB.806.6	chr1	+	1910	14	full-splice_match	MSTO1	ENST00000245564.6	2431	14	4	517	4	246	multi-exon	FALSE	canonical	1	855	junction_2	128040.0236275994	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	21	1733	70.0	-2392	False	AATAAA	-17
PB.806.7	chr1	+	1774	14	full-splice_match	MSTO1	ENST00000245564.6	2431	14	18	639	0	124	multi-exon	FALSE	canonical	1	855	junction_2	128040.0236275994	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	7	1719	20.0	-2378	False	AATAAA	-17
PB.2775.2	chr12	+	4473	10	novel_not_in_catalog	SYT1	novel	3095	12	NA	NA	-481	1	any annotated donor/acceptor	FALSE	canonical	1	3349	junction_1	148147.93891725966	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	322	1590	10.0	-546	False	AATAAA	-20
PB.2775.3	chr12	+	2714	10	novel_not_in_catalog	SYT1	novel	3095	12	NA	NA	-462	-12	any annotated donor/acceptor	FALSE	canonical	1	3349	junction_1	148147.93891725966	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	303	1571	75.0	-527	False	NA	NA
PB.806.2	chr1	+	2455	14	novel_in_catalog	MSTO1	novel	983	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	855	junction_2	112705.97360010662	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	45	1721	35.0	-2416	False	NA	NA
PB.2775.1	chr12	+	2782	11	full-splice_match	SYT1	ENST00000261205.8	4808	11	52	1974	52	-247	multi-exon	FALSE	canonical	1	283787	junction_2	77666.39407935712	NA	16	1	TRUE	NA	NA	NA	C	coding	422	1269	606	1874	60.0	-294	False	NA	NA
PB.12108.10	chrX	-	4415	2	full-splice_match	SPIN3	ENST00000638386.1	4461	2	108	-62	0	-2	multi-exon	FALSE	canonical	1	22980	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	301	1077	20.0	-1	True	NA	NA
PB.12108.11	chrX	-	3256	1	full-splice_match	SPIN3	ENST00000638289.1	4614	1	1466	-108	1179	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1449	False	NA	NA
PB.849.14	chr1	-	3110	14	full-splice_match	DCAF8	ENST00000368073.7	4106	14	-22	1018	3	-180	multi-exon	FALSE	canonical	1	125357	junction_13	226519.3584946514	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	458	2251	40.0	-23	True	ATTAAA	-22
PB.10939.1	chr7	-	2704	13	novel_in_catalog	PRKAG2	novel	3305	16	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	2387	junction_12	85828.72662103808	NA	4	NA	TRUE	NA	NA	NA	A	coding	328	987	642	1628	35.0	18	False	ATTAAA	-20
PB.4122.10	chr16	-	3042	13	novel_in_catalog	NPRL3	novel	2917	3	NA	NA	19	5	intron_retention	FALSE	canonical	1	31033	junction_11	192547.90091645595	NA	3	NA	TRUE	NA	NA	NA	C	coding	466	1401	752	2152	55.0	-2	True	AATAAA	-18
PB.4122.11	chr16	-	2780	14	novel_not_in_catalog	NPRL3	novel	2917	3	NA	NA	-46	4	any annotated donor/acceptor	FALSE	canonical	1	3657	junction_13	169444.18631294035	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	182	1891	55.0	-26	False	AATAAA	-17
PB.8284.4	chr3	-	5025	9	full-splice_match	CD47	ENST00000355354.12	5225	9	-4	204	-4	0	multi-exon	FALSE	canonical	1	398552	junction_8	287417.56413206446	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	122	1039	10.0	-1	True	AATAAA	-15
PB.8284.7	chr3	-	2748	8	novel_in_catalog	CD47	novel	5225	9	NA	NA	-31	1509	no_combination_of_known_junctions	FALSE	canonical	1	182986	junction_1	409495.2918988776	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	149	1030	70.0	1	True	NA	NA
PB.8284.6	chr3	-	5100	11	full-splice_match	CD47	ENST00000361309.5	1285	11	-34	-3781	-23	-2	multi-exon	FALSE	canonical	1	240079	junction_2	426322.7252701878	NA	2	NA	TRUE	NA	NA	NA	C	coding	323	972	141	1112	15.0	9	True	AATAAA	-13
PB.10866.20	chr7	+	2265	15	incomplete-splice_match	NUP205	ENST00000607647.5	4518	30	21679	16	-395	-8	5prime_fragment	FALSE	canonical	1	423808	junction_1	123887.79582751483	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	35	2080	75.0	NA	False	AATAAA	-9
PB.849.11	chr1	-	3053	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	-11	-177	intron_retention	FALSE	canonical	1	76406	junction_12	230312.99001738915	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	398	2191	50.0	61	False	ATTAAA	-25
PB.8284.3	chr3	-	4998	8	novel_in_catalog	CD47	novel	5225	9	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	182986	junction_1	409495.2918988776	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	127	1008	10.0	-6	True	AATAAA	-15
PB.8284.2	chr3	-	5193	8	novel_in_catalog	CD47	novel	5225	9	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	182986	junction_1	409495.2918988776	NA	3	NA	TRUE	NA	NA	NA	C	coding	293	882	120	1001	30.0	1	True	ATTAAA	-14
PB.12282.3	chrX	+	3764	5	full-splice_match	ZNF449	ENST00000339249.4	3773	5	2	7	2	-7	multi-exon	FALSE	canonical	1	18323	junction_1	13123.030430792272	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	139	1695	15.0	2	True	AATAAA	-19
PB.7287.1	chr20	-	1172	7	novel_not_in_catalog	SNHG17	novel	517	4	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	41355	junction_2	239381.91428598406	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-31	True	AATAAA	-18
PB.737.1	chr1	-	2931	5	full-splice_match	CDC42SE1	ENST00000357235.5	3045	5	27	87	-7	-87	multi-exon	FALSE	canonical	1	806713	junction_4	265186.3711480805	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-50	True	AATAAA	-15
PB.8284.9	chr3	-	2629	9	full-splice_match	CD47	ENST00000355354.12	5225	9	-25	2621	-25	1364	multi-exon	FALSE	canonical	1	398552	junction_8	287417.56413206446	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	143	1060	10.0	7	True	NA	NA
PB.8284.8	chr3	-	2745	9	full-splice_match	CD47	ENST00000355354.12	5225	9	4	2476	4	1509	multi-exon	FALSE	canonical	1	398552	junction_8	287417.56413206446	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	114	1031	70.0	7	True	NA	NA
PB.12282.2	chrX	+	2118	5	full-splice_match	ZNF449	ENST00000339249.4	3773	5	0	1655	0	-1655	multi-exon	FALSE	canonical	1	18323	junction_1	13123.030430792272	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	141	1697	30.0	0	True	ATTAAA	-18
PB.4117.2	chr15	-	3260	20	novel_in_catalog	TARSL2	novel	3610	19	NA	NA	-49	273	combination_of_known_junctions	FALSE	canonical	1	14284	junction_9	39823.899380833325	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	105	1445	15.0	-36	True	AATAAA	-17
PB.4117.3	chr15	-	3242	19	full-splice_match	TARSL2	ENST00000335968.7	3610	19	25	343	25	272	multi-exon	FALSE	canonical	1	90545	junction_17	22353.025588287088	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	193	2601	15.0	-124	False	AATAAA	-16
PB.343.1	chr1	-	4527	1	novel_in_catalog	AL512353.1	novel	514	2	NA	NA	1	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.4117.1	chr15	-	3310	19	full-splice_match	TARSL2	ENST00000335968.7	3610	19	152	148	-10	-148	multi-exon	FALSE	canonical	1	90545	junction_17	22353.025588287088	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	66	2474	45.0	3	True	ATTAAA	-33
PB.1658.1	chr10	+	2506	12	novel_in_catalog	TCF7L2	novel	3778	11	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	30975	junction_11	58928.67651815895	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	510	1838	90.0	1	True	TTTAAA	-10
PB.12282.1	chrX	+	5418	4	novel_in_catalog	ZNF449	novel	2051	2	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	18323	junction_1	14836.471061393124	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	2147	3343	30.0	-9	True	AATAAA	-25
PB.1658.3	chr10	+	2533	14	full-splice_match	TCF7L2	ENST00000369397.8	3802	14	-107	1376	-62	-7	multi-exon	FALSE	canonical	1	20228	junction_13	70924.43131536752	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	413	2203	90.0	-16	True	TTTAAA	-10
PB.1658.2	chr10	+	2554	13	novel_in_catalog	TCF7L2	novel	3778	11	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	21142	junction_12	64537.51912238509	NA	10	NA	TRUE	NA	NA	NA	C	coding	459	1380	507	1886	90.0	4	True	TTTAAA	-10
PB.10737.4	chr7	+	3314	21	novel_in_catalog	SRRT	novel	582	2	NA	NA	-6	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_18	471206.89409254986	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	1250	3199	10.0	-28	True	AATAAA	-16
PB.7510.12	chr21	-	2699	13	novel_in_catalog	SETD4	novel	4272	10	NA	NA	6	-403	combination_of_known_junctions	FALSE	canonical	1	22910	junction_11	45956.32960054759	NA	2	NA	TRUE	NA	NA	NA	C	coding	416	1251	401	1651	20.0	5	True	AATAAA	-20
PB.10737.6	chr7	+	2522	18	novel_not_in_catalog	SRRT	novel	582	2	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	485159.3829983957	NA	1	NA	TRUE	NA	NA	NA	C	coding	728	2187	221	2407	10.0	-6	True	AATAAA	-16
PB.10737.7	chr7	+	3883	21	novel_in_catalog	SRRT	novel	582	2	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_18	501539.2590430484	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	1819	3768	10.0	0	True	AATAAA	-16
PB.9583.18	chr5	+	1805	1	incomplete-splice_match	LARP1	ENST00000336314.8	6595	19	102895	6	4409	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	121	366	313	678	25.0	-3912	False	AATAAA	-14
PB.10737.1	chr7	+	3835	20	novel_in_catalog	SRRT	novel	582	2	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_17	454787.41050556203	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	1775	3721	5.0	-30	True	AATAAA	-15
PB.10737.2	chr7	+	4083	19	novel_in_catalog	SRRT	novel	582	2	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_16	457484.60431001877	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	2019	3968	10.0	-29	True	AATAAA	-16
PB.10737.3	chr7	+	4817	19	novel_in_catalog	SRRT	novel	582	2	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_16	421602.69968541217	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	2753	4702	10.0	-29	True	AATAAA	-16
PB.7260.5	chr20	+	5096	14	incomplete-splice_match	CEP250	ENST00000397527.5	15703	35	35709	7307	-3340	333	5prime_fragment	FALSE	canonical	1	118130	junction_5	67267.47252933773	NA	0	NA	TRUE	NA	NA	NA	B	coding	1524	4575	175	4749	10.0	-68	False	AATAAA	-20
PB.8595.1	chr3	-	3538	15	full-splice_match	P3H2	ENST00000319332.9	3509	15	-130	101	-130	2	multi-exon	FALSE	canonical	1	164234	junction_14	36668.39630216256	NA	2	NA	TRUE	NA	NA	NA	C	coding	708	2127	329	2455	15.0	1377	False	AATAAA	-20
PB.3013.2	chr12	+	3052	18	full-splice_match	AACS	ENST00000316519.10	3316	18	260	4	205	0	multi-exon	FALSE	canonical	1	159584	junction_1	36987.42989889878	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	31	1965	10.0	181	False	AATAAA	-23
PB.3013.1	chr12	+	3117	17	novel_in_catalog	AACS	novel	3316	18	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	1	31657	junction_16	60386.89945313056	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	205	2004	5.0	-77	False	AATAAA	-33
PB.3054.1	chr13	-	3409	1	incomplete-splice_match	SACS	ENST00000402364.1	15134	8	43302	7	22649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	638	1917	190	2106	30.0	550	False	AATAAA	-17
PB.8595.2	chr3	-	2883	15	full-splice_match	P3H2	ENST00000319332.9	3509	15	521	105	521	-2	multi-exon	FALSE	canonical	1	164234	junction_14	36668.39630216256	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	221	1804	25.0	-33	True	AATAAA	-16
PB.3054.2	chr13	-	5406	1	incomplete-splice_match	SACS	ENST00000402364.1	15134	8	41305	7	20652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	1273	3822	282	4103	30.0	-1447	False	AATAAA	-17
PB.10125.2	chr6	-	5843	19	novel_in_catalog	USP45	novel	5826	18	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	3920	junction_8	35876.1101615126	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	1161	2567	30.0	-15	True	AATAAA	-22
PB.388.5	chr1	+	3489	6	full-splice_match	NSUN4	ENST00000474844.5	2150	6	611	-1950	-1	-1011	multi-exon	FALSE	canonical	1	154333	junction_1	52105.98721298733	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	40	1194	95.0	-19	True	NA	NA
PB.11110.5	chr8	+	2362	21	incomplete-splice_match	IKBKB	ENST00000649612.1	3912	22	112	3137	-6	-1	3prime_fragment	FALSE	canonical	1	82115	junction_1	89086.24916533133	NA	2	NA	TRUE	NA	NA	NA	C	coding	768	2304	59	2362	5.0	-6117	False	AATAGA	-41
PB.8889.20	chr4	-	2011	2	incomplete-splice_match	EIF4E	ENST00000504472.1	588	3	3	4886	-2	-4886	3prime_fragment	FALSE	canonical	1	168469	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	2	True	NA	NA
PB.6519.1	chr2	+	3336	10	novel_not_in_catalog	PLEK	novel	2869	9	NA	NA	-566	-1	any annotated donor/acceptor	FALSE	canonical	1	1047	junction_1	347490.6295797462	NA	4	NA	TRUE	NA	NA	NA	C	coding	350	1053	648	1700	15.0	-8399	False	AATAAA	-21
PB.5493.14	chr18	-	1794	14	novel_in_catalog	NARS	novel	3099	14	NA	NA	8	-251	combination_of_known_junctions	FALSE	canonical	1	346423	junction_13	399347.6375396319	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	100	1743	75.0	-17	True	NA	NA
PB.7260.2	chr20	+	2952	17	incomplete-splice_match	CEP250	ENST00000397527.5	15703	35	-176	41217	-11	0	3prime_fragment	FALSE	canonical	1	11890	junction_1	29051.89324611382	NA	0	NA	TRUE	NA	NA	NA	B	coding	685	2055	897	2951	60.0	-22	True	GGGGCT	-29
PB.5493.12	chr18	-	2193	14	full-splice_match	NARS	ENST00000256854.9	3099	14	373	533	0	154	multi-exon	FALSE	canonical	1	1161283	junction_13	260435.39117147468	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	84	1730	45.0	-1	True	ATTAAA	-28
PB.5493.13	chr18	-	1932	14	full-splice_match	NARS	ENST00000256854.9	3099	14	329	838	-20	-144	multi-exon	FALSE	canonical	1	1161283	junction_13	260435.39117147468	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	128	1774	30.0	-45	True	CATAAA	-25
PB.5493.10	chr18	-	3181	14	novel_not_in_catalog	NARS	novel	3099	14	NA	NA	-4	-8	intron_retention	FALSE	canonical	1	6234	junction_2	585558.3618178708	NA	1	1	TRUE	NA	NA	NA	C	coding	421	1266	96	1361	30.0	-13	True	AATAAA	-12
PB.5493.11	chr18	-	2483	14	full-splice_match	NARS	ENST00000256854.9	3099	14	397	219	0	-219	multi-exon	FALSE	canonical	1	1161283	junction_13	260435.39117147468	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	60	1706	50.0	23	True	AATAAA	-9
PB.6478.15	chr2	+	3873	13	full-splice_match	VRK2	ENST00000340157.8	1888	13	105	-2090	-79	2041	multi-exon	FALSE	canonical	1	128372	junction_1	63158.14872273675	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	79	1605	30.0	-18	True	AATATA	-23
PB.10125.1	chr6	-	5878	18	full-splice_match	USP45	ENST00000500704.6	5826	18	4	-56	1	56	multi-exon	FALSE	canonical	1	20297	junction_17	30349.272277577707	NA	2	NA	TRUE	NA	NA	NA	C	coding	814	2445	41	2485	40.0	-4	True	NA	NA
PB.5928.22	chr19	+	3282	11	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	6199	junction_1	170653.13219908974	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	197	1984	40.0	-18	True	AATAAA	-21
PB.5928.23	chr19	+	3050	13	novel_not_in_catalog	CD22	novel	554	4	NA	NA	0	12	any annotated donor/acceptor	FALSE	canonical	1	7601	junction_6	203857.32093727274	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	383	2380	20.0	-18	True	AATAAA	-33
PB.5928.20	chr19	+	2388	10	novel_in_catalog	CD22	novel	554	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	11175	junction_2	225660.93211620738	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	384	1730	40.0	-19	True	AATAAA	-21
PB.5928.21	chr19	+	1120	4	incomplete-splice_match	CD22	ENST00000544992.6	2698	13	-43	10270	0	-2	3prime_fragment	FALSE	canonical	1	89447	junction_2	90614.60505165084	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	85	975	25.0	-18	True	NA	NA
PB.5928.26	chr19	+	2008	9	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12718	junction_1	197255.8064132714	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	94	1350	40.0	-11	True	AATAAA	-21
PB.5928.27	chr19	+	3740	13	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	105709	junction_1	157106.75244424216	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	899	3082	40.0	0	True	AATAAA	-21
PB.5928.24	chr19	+	2763	12	full-splice_match	CD22	ENST00000341773.10	2755	12	0	-8	0	8	multi-exon	FALSE	canonical	1	19805	junction_4	211061.07794813355	NA	1	1	TRUE	NA	NA	NA	C	coding	670	2013	85	2097	20.0	-18	True	AATAAA	-29
PB.5928.25	chr19	+	2238	2	novel_not_in_catalog	CD22	novel	554	4	NA	NA	2	-383	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	83	1	FALSE	NA	NA	NA	C	coding	240	723	19	741	80.0	-16	True	NA	NA
PB.8404.2	chr3	+	7738	56	full-splice_match	DNAJC13	ENST00000260818.10	7730	56	-9	1	-9	-1	multi-exon	TRUE	canonical	1	131282	junction_2	68080.57661511065	NA	0	NA	TRUE	NA	NA	NA	C	coding	2243	6732	258	6989	30.0	1	True	AATAAA	-26
PB.5928.28	chr19	+	3416	15	novel_not_in_catalog	CD22	novel	554	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	3906	junction_12	197456.61540311604	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	67	2589	40.0	0	True	AATAAA	-21
PB.5928.29	chr19	+	3206	13	novel_in_catalog	CD22	novel	554	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26290	junction_1	171061.4713881306	NA	1	1	TRUE	NA	NA	NA	C	coding	727	2184	365	2548	40.0	0	True	AATAAA	-21
PB.7362.1	chr20	+	2137	1	antisense	novelGene_ZNF217_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	116	351	1740	2090	95.0	-3197	False	NA	NA
PB.5682.14	chr19	+	2754	7	novel_in_catalog	ZNF559	novel	2991	6	NA	NA	-23	0	no_combination_of_known_junctions	FALSE	canonical	1	688	junction_3	33275.04647337935	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	363	1979	35.0	105	False	AATAAA	-18
PB.5682.12	chr19	+	2693	6	novel_in_catalog	ZNF559	novel	2991	6	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	14612	junction_2	28957.844830028356	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	303	1919	30.0	66	False	AATAAA	-17
PB.5682.13	chr19	+	2742	7	novel_in_catalog	ZNF559	novel	2991	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	24745	junction_1	21952.03871068825	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	351	1967	35.0	81	False	AATAAA	-18
PB.5682.10	chr19	+	2998	5	incomplete-splice_match	ZNF559	ENST00000587557.5	2991	6	459	0	0	0	5prime_fragment	FALSE	canonical	1	14612	junction_1	29371.66264446056	NA	3	NA	TRUE	NA	NA	NA	C	coding	538	1617	607	2223	35.0	52	False	AATAAA	-18
PB.5682.11	chr19	+	3289	6	incomplete-splice_match	ZNF559	ENST00000592896.5	1488	7	43	-1378	9	0	5prime_fragment	FALSE	canonical	1	16205	junction_2	26522.59744745978	NA	2	NA	TRUE	NA	NA	NA	C	coding	307	924	1591	2514	35.0	61	False	AATAAA	-18
PB.8166.2	chr3	-	3588	17	full-splice_match	BAP1	ENST00000460680.5	3937	17	351	-2	-48	2	multi-exon	TRUE	canonical	1	447054	junction_6	125854.97695771647	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	122	2311	25.0	1	True	AATAAA	-23
PB.3435.2	chr14	-	4535	21	novel_not_in_catalog	TXNDC16	novel	4564	21	NA	NA	3	-10	any annotated donor/acceptor	FALSE	canonical	1	3556	junction_15	25793.773251455477	NA	10	2	TRUE	NA	NA	NA	C	coding	804	2415	417	2831	30.0	0	True	AATAAA	-16
PB.3435.3	chr14	-	3714	21	full-splice_match	TXNDC16	ENST00000281741.8	4564	21	-37	887	-21	-887	multi-exon	FALSE	canonical	1	50595	junction_20	17523.70033440426	NA	18	NA	TRUE	NA	NA	NA	C	coding	809	2430	458	2887	20.0	-41	True	ATTAAA	-10
PB.3435.1	chr14	-	4567	21	full-splice_match	TXNDC16	ENST00000281741.8	4564	21	-7	4	-7	-4	multi-exon	TRUE	canonical	1	50595	junction_20	17523.70033440426	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	428	2857	20.0	-11	True	AATAAA	-22
PB.8166.1	chr3	-	3680	17	novel_in_catalog	BAP1	novel	3937	17	NA	NA	-71	2	combination_of_known_junctions	FALSE	canonical	1	51605	junction_3	178151.23436208456	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	145	2403	25.0	-22	True	AATAAA	-23
PB.6869.6	chr2	+	3302	24	full-splice_match	OSBPL6	ENST00000359685.7	7114	24	8	3804	0	7	multi-exon	FALSE	canonical	1	20578	junction_13	22555.2455285781	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	537	3233	15.0	-23	True	AATAAA	-23
PB.9074.19	chr4	+	4254	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	144	632	20.0	0	True	NA	NA
PB.9074.18	chr4	+	4431	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	150	638	20.0	-6	True	NA	NA
PB.9038.14	chr4	+	2302	14	full-splice_match	GUCY1B1	ENST00000264424.12	3124	14	-17	839	11	14	multi-exon	FALSE	canonical	1	98629	junction_2	42022.3253945106	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	100	1959	20.0	3	True	AATGAA	-5
PB.9074.15	chr4	+	3829	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	3	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	165	653	20.0	-21	True	NA	NA
PB.9074.14	chr4	+	3846	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	3	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	4	NA	TRUE	NA	NA	NA	C	coding	162	489	165	653	20.0	-21	True	NA	NA
PB.9074.17	chr4	+	3744	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	-11	-691	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	152	640	30.0	-8	True	CATAAA	-20
PB.9074.16	chr4	+	4727	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	8	-164	8	164	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	160	648	15.0	-16	True	AGTAAA	-21
PB.9074.11	chr4	+	4156	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	2	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	393963.0081524914	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	166	654	20.0	-22	True	NA	NA
PB.6869.4	chr2	+	3233	23	novel_in_catalog	OSBPL6	novel	3637	26	NA	NA	-15	8	combination_of_known_junctions	FALSE	canonical	1	20578	junction_12	21778.32623251083	NA	1	NA	TRUE	NA	NA	NA	C	coding	867	2604	560	3163	15.0	-46	True	AATAAA	-24
PB.9074.13	chr4	+	2228	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	2	2341	2	1498	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	3	NA	TRUE	NA	NA	NA	C	coding	162	489	166	654	15.0	-22	True	AATACA	-31
PB.9074.12	chr4	+	3878	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	2	691	2	-691	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	4	NA	TRUE	NA	NA	NA	C	coding	162	489	166	654	30.0	-22	True	CATAAA	-20
PB.3264.10	chr13	+	1995	15	incomplete-splice_match	ARHGEF7	ENST00000466143.5	1681	16	-23	2170	19	-53	3prime_fragment	FALSE	canonical	1	117749	junction_1	83815.13633601934	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	363	1673	40.0	0	True	AATAAA	-7
PB.3264.11	chr13	+	4921	21	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	117749	junction_1	96410.17489015358	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	363	2303	20.0	0	True	ATTAAA	-21
PB.3264.12	chr13	+	2225	2	incomplete-splice_match	ARHGEF7	ENST00000491775.5	581	6	26	61720	-16	2118	3prime_fragment	FALSE	canonical	1	117749	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	2	463	100.0	7	True	NA	NA
PB.3264.13	chr13	+	3435	20	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	-15	-1343	combination_of_known_junctions	FALSE	canonical	1	40112	junction_3	114904.27531821623	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	224	2164	5.0	8	True	AATAAA	-18
PB.3264.14	chr13	+	2483	20	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	1	-2279	combination_of_known_junctions	FALSE	canonical	1	40112	junction_3	114904.27531821623	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	208	2148	25.0	24	True	TATAAA	-16
PB.3264.15	chr13	+	4842	18	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	0	2	intron_retention	FALSE	canonical	1	21335	junction_1	109312.39807797235	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	282	2222	15.0	-10	True	ATTAAA	-23
PB.3264.16	chr13	+	2316	19	incomplete-splice_match	ARHGEF7	ENST00000375736.8	5032	20	-24	4198	0	-4194	3prime_fragment	FALSE	canonical	1	127238	junction_14	82172.79481264458	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1818	498	2315	30.0	-10	True	ATTAAA	-27
PB.3264.17	chr13	+	5058	20	full-splice_match	ARHGEF7	ENST00000375736.8	5032	20	-24	-2	0	2	multi-exon	FALSE	canonical	1	127238	junction_14	86665.38417374829	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	498	2438	15.0	-10	True	ATTAAA	-23
PB.3264.18	chr13	+	2136	14	incomplete-splice_match	ARHGEF7	ENST00000218789.9	5233	21	1	24668	1	-46	3prime_fragment	FALSE	canonical	1	190131	junction_1	66669.19011519027	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	497	1807	35.0	-9	True	AATAAA	-14
PB.3264.19	chr13	+	4584	21	novel_not_in_catalog	ARHGEF7	novel	557	2	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_20	111079.54834733305	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	496	2436	20.0	-8	True	ATTAAA	-21
PB.6498.1	chr2	+	2821	5	full-splice_match	OTX1	ENST00000282549.6	2861	5	29	11	0	-11	multi-exon	FALSE	canonical	1	11601	junction_3	3798.751595919375	NA	0	NA	TRUE	NA	NA	NA	A	coding	353	1062	251	1312	25.0	1	True	AATAAA	-9
PB.8404.7	chr3	+	4301	28	incomplete-splice_match	DNAJC13	ENST00000650455.1	7707	57	66878	-10	5359	-1	5prime_fragment	FALSE	canonical	1	209498	junction_4	61392.63288233341	NA	0	NA	TRUE	NA	NA	NA	C	coding	1134	3405	148	3552	30.0	-2995	False	AATAAA	-26
PB.7318.2	chr20	+	2391	4	novel_not_in_catalog	SNX21	novel	574	3	NA	NA	-2	-422	intron_retention	FALSE	non_canonical	0	0	junction_3	72630.65942607616	NA	2	1	TRUE	NA	NA	NA	C	coding	184	555	691	1245	30.0	-22	True	AATAAA	-13
PB.7318.3	chr20	+	2703	3	novel_not_in_catalog	SNX21	novel	574	3	NA	NA	27	2	intron_retention	FALSE	non_canonical	0	0	junction_2	86771.0	NA	15	1	TRUE	NA	NA	NA	C	coding	367	1104	30	1133	30.0	2	True	TATAAA	-34
PB.9585.18	chr5	+	2932	7	novel_in_catalog	CNOT8	novel	485	3	NA	NA	178	-2	combination_of_known_junctions	FALSE	canonical	1	9633	junction_1	232718.92600994493	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	703	1581	20.0	240	False	AATAAA	-21
PB.7318.1	chr20	+	2827	4	full-splice_match	SNX21	ENST00000491381.5	1607	4	-71	-1149	-29	-2	multi-exon	FALSE	canonical	1	52847	junction_1	55675.38350713596	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	167	1261	30.0	-395	False	TATAAA	-30
PB.9585.16	chr5	+	2287	6	novel_in_catalog	CNOT8	novel	485	3	NA	NA	8	-2	no_combination_of_known_junctions	FALSE	canonical	1	7384	junction_1	255593.28860171585	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	376	936	20.0	16	True	AATAAA	-21
PB.9585.17	chr5	+	2279	6	novel_in_catalog	CNOT8	novel	485	3	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	1	35750	junction_3	294491.94721323025	NA	10	1	TRUE	NA	NA	NA	C	coding	238	717	215	931	15.0	48	True	AATAAA	-18
PB.9585.14	chr5	+	2487	7	full-splice_match	CNOT8	ENST00000403027.6	2604	7	115	2	-3	-2	multi-exon	FALSE	canonical	1	43653	junction_1	220573.11323736224	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	258	1136	20.0	5	True	AATAAA	-21
PB.9585.15	chr5	+	1423	7	full-splice_match	CNOT8	ENST00000285896.10	2528	7	91	1014	2	-93	multi-exon	FALSE	canonical	1	143299	junction_1	185408.37544788053	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	205	1083	10.0	10	True	AGTAAA	-16
PB.9585.12	chr5	+	2062	5	incomplete-splice_match	CNOT8	ENST00000521450.5	1158	6	110	-919	0	-1	5prime_fragment	FALSE	canonical	1	5671	junction_1	285397.54880254314	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	150	710	20.0	0	True	AATAAA	-22
PB.9585.13	chr5	+	1479	7	full-splice_match	CNOT8	ENST00000403027.6	2604	7	111	1014	1	-94	multi-exon	FALSE	canonical	1	43653	junction_1	220573.11323736224	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	262	1140	10.0	1	True	AGTAAA	-15
PB.9585.10	chr5	+	2640	8	novel_in_catalog	CNOT8	novel	485	3	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	616	junction_1	279476.97949613974	NA	4	1	TRUE	NA	NA	NA	C	coding	292	879	410	1288	20.0	-3	True	AATAAA	-22
PB.9585.11	chr5	+	2510	7	novel_in_catalog	CNOT8	novel	485	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1081	junction_1	235780.98071562563	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	280	1158	20.0	0	True	AATAAA	-22
PB.5063.13	chr17	+	2324	5	full-splice_match	GOSR2	ENST00000640621.1	3059	5	4	731	3	164	multi-exon	FALSE	canonical	1	434971	junction_2	44784.829554074444	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	52	639	85.0	-18	True	NA	NA
PB.3098.15	chr13	-	1881	6	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-3	89	intron_retention	FALSE	canonical	1	306924	junction_5	155890.06678374347	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	114	1865	25.0	-4	True	ATTAAA	-16
PB.8404.6	chr3	+	5038	34	incomplete-splice_match	DNAJC13	ENST00000260818.10	7730	56	60261	1	-1440	-1	5prime_fragment	FALSE	canonical	1	155987	junction_2	65050.79085117749	NA	10	2	TRUE	NA	NA	NA	C	coding	1375	4128	162	4289	30.0	-9794	False	AATAAA	-26
PB.3098.17	chr13	-	2047	3	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-2	18	intron_retention	FALSE	canonical	1	306924	junction_2	50454.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	113	1555	90.0	-3	True	NA	NA
PB.3098.16	chr13	-	2112	3	incomplete-splice_match	N4BP2L2	ENST00000267068.5	9427	6	-12	16565	-2	18	3prime_fragment	FALSE	canonical	1	407833	junction_1	116344.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	178	1620	90.0	-3	True	NA	NA
PB.3098.11	chr13	-	1964	6	novel_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-13	-130	combination_of_known_junctions	FALSE	canonical	1	30330	junction_5	240950.25089557387	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	29	1780	25.0	-14	True	AATAAA	-20
PB.1431.1	chr10	+	3800	9	novel_in_catalog	SIRT1	novel	4094	9	NA	NA	19	-4	combination_of_known_junctions	FALSE	canonical	1	6053	junction_1	78364.59607501337	NA	3	NA	TRUE	NA	NA	NA	A	coding	555	1668	344	2011	30.0	490	False	ATTAAA	-23
PB.3098.13	chr13	-	1907	7	novel_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-2	111	combination_of_known_junctions	FALSE	canonical	1	74075	junction_6	217632.09216601207	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	118	1869	40.0	-3	True	ATTAAA	-38
PB.1846.9	chr11	-	4542	21	novel_in_catalog	HPS5	novel	4725	22	NA	NA	9	-87	no_combination_of_known_junctions	FALSE	canonical	1	1925	junction_20	43747.820454138055	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	368	3415	45.0	5	True	AATAAA	-28
PB.1846.6	chr11	-	4704	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	-10	-81	no_combination_of_known_junctions	FALSE	canonical	1	10737	junction_22	44399.851834989364	NA	4	NA	TRUE	NA	NA	NA	C	coding	1129	3390	182	3571	35.0	-14	True	AATAAA	-34
PB.1846.7	chr11	-	4594	23	novel_not_in_catalog	HPS5	novel	4725	22	NA	NA	-31	-81	any annotated donor/acceptor	FALSE	canonical	1	449	junction_11	54471.989839270485	NA	4	1	TRUE	NA	NA	NA	C	coding	1122	3369	93	3461	35.0	-5	True	AATAAA	-34
PB.1846.5	chr11	-	4307	22	novel_in_catalog	HPS5	novel	4725	22	NA	NA	8	-13	combination_of_known_junctions	TRUE	canonical	1	6581	junction_7	51931.342993219085	NA	2	NA	TRUE	NA	NA	NA	C	coding	645	1938	295	2232	30.0	4	True	AGTAAA	-13
PB.1846.2	chr11	-	4621	22	full-splice_match	HPS5	ENST00000396253.7	4725	22	24	80	24	-80	multi-exon	FALSE	canonical	1	34157	junction_21	37269.88608159605	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	440	3487	30.0	-18	True	AATAAA	-35
PB.1846.3	chr11	-	4531	22	novel_in_catalog	HPS5	novel	4725	22	NA	NA	1	-86	combination_of_known_junctions	FALSE	canonical	1	18824	junction_21	39809.22893294754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	356	3403	45.0	-3	True	AATAAA	-29
PB.1846.1	chr11	-	4760	23	full-splice_match	HPS5	ENST00000349215.7	4491	23	34	-303	34	-88	multi-exon	FALSE	canonical	1	36087	junction_22	40806.80729340884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	245	3634	45.0	-8	True	AATAAA	-27
PB.1201.3	chr1	+	2394	4	novel_in_catalog	TSNAX	novel	2650	6	NA	NA	5	-3	no_combination_of_known_junctions	FALSE	canonical	1	4113	junction_2	227923.08945928814	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	338	778	15.0	-15	True	AATAAA	-18
PB.1201.2	chr1	+	2341	6	full-splice_match	TSNAX	ENST00000366639.8	2650	6	-2	311	-2	-311	multi-exon	FALSE	canonical	1	414050	junction_5	51738.732758350394	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	161	1033	50.0	-24	True	AATAAA	-7
PB.1201.1	chr1	+	2167	6	full-splice_match	TSNAX	ENST00000366639.8	2650	6	-37	520	-37	-520	multi-exon	FALSE	canonical	1	414050	junction_5	51738.732758350394	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	196	1068	20.0	-6441	False	NA	NA
PB.1201.7	chr1	+	2781	7	novel_in_catalog	TSNAX	novel	2650	6	NA	NA	16	-4	combination_of_known_junctions	FALSE	canonical	1	7990	junction_5	232704.11199274784	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	129	656	15.0	8	True	AATAAA	-17
PB.6869.8	chr2	+	3424	24	full-splice_match	OSBPL6	ENST00000359685.7	7114	24	29	3661	10	-1	multi-exon	FALSE	canonical	1	20578	junction_13	22555.2455285781	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	516	3212	95.0	-2	True	NA	NA
PB.1201.5	chr1	+	1785	6	full-splice_match	TSNAX	ENST00000366639.8	2650	6	64	801	50	-801	multi-exon	FALSE	canonical	1	414050	junction_5	51738.732758350394	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	95	967	85.0	42	True	NA	NA
PB.1201.4	chr1	+	2989	8	novel_not_in_catalog	TSNAX	novel	2650	6	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	1	1877	junction_5	248315.38776725053	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	147	578	15.0	-10	True	AATAAA	-17
PB.9895.3	chr6	-	2219	7	full-splice_match	AGPAT1	ENST00000375107.7	2234	7	14	1	14	-1	multi-exon	TRUE	canonical	1	513438	junction_6	248239.90492246943	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	305	1156	5.0	-28	True	AATAAA	-12
PB.6869.9	chr2	+	3436	24	novel_in_catalog	OSBPL6	novel	3637	26	NA	NA	-10	-1	no_combination_of_known_junctions	FALSE	canonical	1	13969	junction_3	22824.82166696039	NA	1	NA	TRUE	NA	NA	NA	C	coding	903	2712	513	3224	95.0	1	True	NA	NA
PB.7914.8	chr3	+	1836	10	full-splice_match	THUMPD3	ENST00000452837.6	2877	10	210	831	0	1	multi-exon	FALSE	canonical	1	135218	junction_1	100595.78608801994	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	130	1653	30.0	-7	True	TTTAAA	-19
PB.7914.9	chr3	+	3955	10	full-splice_match	THUMPD3	ENST00000345094.7	3961	10	5	1	5	-1	multi-exon	FALSE	canonical	1	92279	junction_1	110016.43161819056	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	330	1853	35.0	-2	True	AATAAA	-20
PB.258.1	chr1	-	1464	3	novel_not_in_catalog	MARCKSL1	novel	1699	2	NA	NA	144	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1073082.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	195	588	120	707	20.0	-3	True	AATAAA	-13
PB.7914.4	chr3	+	3074	10	novel_in_catalog	THUMPD3	novel	2877	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	37823	junction_1	123059.80749122672	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	537	2060	20.0	-16	True	ATTAAA	-22
PB.7914.5	chr3	+	3734	10	full-splice_match	THUMPD3	ENST00000345094.7	3961	10	-5	232	-4	-232	multi-exon	FALSE	canonical	1	92279	junction_1	110016.43161819056	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	340	1863	40.0	-12	True	AATAAA	-20
PB.7914.6	chr3	+	2216	10	novel_in_catalog	THUMPD3	novel	2877	10	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	1	37823	junction_1	123059.80749122672	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	510	2033	30.0	11	True	TTTAAA	-19
PB.7497.9	chr21	+	7488	1	novel_in_catalog	IFNAR1	novel	250	2	NA	NA	-2	-3153	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	16	NA	NA	NA	NA	NA	C	coding	128	387	233	619	65.0	-2	True	NA	NA
PB.7914.1	chr3	+	2683	10	full-splice_match	THUMPD3	ENST00000452837.6	2877	10	194	0	-15	0	multi-exon	FALSE	canonical	1	135218	junction_1	100595.78608801994	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	146	1669	20.0	-167	False	ATTAAA	-22
PB.7914.2	chr3	+	2868	10	novel_not_in_catalog	THUMPD3	novel	2877	10	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	9803	junction_1	130139.25690838513	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	331	1854	20.0	-19	True	ATTAAA	-22
PB.9518.1	chr5	+	2997	1	full-splice_match	PCDHB14	ENST00000239449.6	4828	1	369	1462	-58	204	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	798	2397	206	2602	30.0	-42	False	AATAAA	-29
PB.4810.12	chr17	-	2064	17	novel_in_catalog	FLII	novel	2377	17	NA	NA	-12	328	combination_of_known_junctions	FALSE	canonical	1	428375	junction_6	200247.9223968281	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2016	49	2064	25.0	-1	True	NA	NA
PB.4810.11	chr17	-	4285	28	novel_in_catalog	FLII	novel	644	4	NA	NA	-8	-6	intron_retention	FALSE	canonical	1	428375	junction_17	278546.93665976246	NA	17	NA	TRUE	NA	NA	NA	C	coding	1187	3564	24	3587	50.0	24	True	ATTAAA	-14
PB.7497.7	chr21	+	2771	6	novel_not_in_catalog	IFNAR1	novel	250	2	NA	NA	-3	-45	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	171641.79552008887	NA	3	1	TRUE	NA	NA	NA	C	coding	164	495	294	788	35.0	-3	True	AATAAA	-20
PB.813.7	chr1	-	4127	22	novel_in_catalog	ARHGEF2	novel	4080	22	NA	NA	-9	0	intron_retention	FALSE	canonical	1	29238	junction_21	184958.1160122671	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	131	3040	30.0	-4	True	ATTAAA	-14
PB.234.9	chr1	-	2126	5	full-splice_match	SRSF4	ENST00000466448.4	1264	5	-45	-817	-37	-1	multi-exon	FALSE	canonical	1	40257	junction_1	366977.16414138087	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	176	1570	80.0	-30	True	NA	NA
PB.11761.12	chr9	-	986	8	full-splice_match	RAB14	ENST00000373840.8	4145	8	4	3155	4	207	multi-exon	FALSE	canonical	1	385902	junction_7	279351.9307237042	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	235	882	75.0	3	True	NA	NA
PB.7497.2	chr21	+	2703	12	novel_not_in_catalog	IFNAR1	novel	250	2	NA	NA	-12	-1308	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	141185.3573468475	NA	1	1	TRUE	NA	NA	NA	C	coding	488	1467	303	1769	20.0	-12	True	NA	NA
PB.5804.1	chr19	+	2201	1	full-splice_match	AC008764.6	ENST00000595909.2	2069	1	-139	7	-139	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-13	True	NA	NA
PB.7497.3	chr21	+	3275	11	full-splice_match	IFNAR1	ENST00000270139.7	6139	11	60	2804	-9	-2804	multi-exon	FALSE	canonical	1	231590	junction_1	79756.91144120363	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	300	1766	40.0	-9	True	NA	NA
PB.635.25	chr1	-	3343	20	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-20	any annotated donor/acceptor	FALSE	canonical	1	19607	junction_18	1513779.5352548894	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	203	2506	90.0	-1	True	NA	NA
PB.8371.1	chr3	+	3584	16	novel_not_in_catalog	MCM2	novel	3622	16	NA	NA	-9201	-13	any annotated donor/acceptor	FALSE	canonical	1	2194	junction_1	252784.45304532125	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	169	2934	50.0	-9439	False	AATAAA	-5
PB.8371.2	chr3	+	3422	16	full-splice_match	MCM2	ENST00000265056.11	3622	16	197	3	10	-3	multi-exon	FALSE	canonical	1	551335	junction_3	148062.76250662532	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	75	2762	20.0	9	True	AATAAA	-15
PB.8371.3	chr3	+	3172	15	novel_in_catalog	MCM2	novel	3622	16	NA	NA	12	7	combination_of_known_junctions	FALSE	canonical	1	28	junction_1	262078.47050255613	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	136	2502	10.0	5802	False	AATAAA	-25
PB.3631.8	chr14	+	2287	11	full-splice_match	UBR7	ENST00000013070.10	3694	11	200	1207	13	783	multi-exon	FALSE	canonical	1	256567	junction_3	71293.25981668955	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	37	1314	50.0	-14	True	AATAAA	-19
PB.2961.1	chr12	-	2294	10	incomplete-splice_match	SPPL3	ENST00000353487.6	4148	11	93499	1313	570	642	5prime_fragment	FALSE	canonical	1	241849	junction_8	110541.1822534932	NA	4	NA	TRUE	NA	NA	NA	A	coding	347	1044	75	1118	85.0	NA	False	NA	NA
PB.7497.1	chr21	+	3307	12	novel_not_in_catalog	IFNAR1	novel	250	2	NA	NA	-31	-717	any annotated donor/acceptor	FALSE	canonical	1	2944	junction_11	140473.01373432303	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	322	1788	10.0	-112	False	NA	NA
PB.4743.12	chr17	+	1901	12	novel_in_catalog	SENP3-EIF4A1	novel	3519	21	NA	NA	9543	291	no_combination_of_known_junctions	FALSE	canonical	1	10642	junction_1	1702833.6562125492	NA	2	NA	TRUE	NA	NA	NA	B	coding	390	1173	209	1381	5.0	4	True	AATAAA	-18
PB.4743.11	chr17	+	1945	2	full-splice_match	EIF4A1	ENST00000580886.5	562	2	2	-1385	0	-18	multi-exon	FALSE	canonical	1	1004118	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.4743.10	chr17	+	2663	3	full-splice_match	EIF4A1	ENST00000577929.1	696	3	-1016	-951	0	-18	multi-exon	FALSE	canonical	1	817094	junction_1	1982804.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	1458	1898	85.0	2	True	NA	NA
PB.9462.1	chr5	+	2267	6	novel_not_in_catalog	TXNDC15	novel	3548	5	NA	NA	9	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	219870.10455321113	NA	0	NA	TRUE	NA	NA	NA	B	coding	348	1047	80	1126	25.0	14	True	TATAAA	-21
PB.7834.3	chr22	-	7047	4	full-splice_match	TCF20	ENST00000335626.8	6237	4	170	-980	170	-63	multi-exon	FALSE	canonical	1	137374	junction_1	50496.82883992705	NA	2	NA	TRUE	NA	NA	NA	C	coding	1902	5709	74	5782	90.0	4083	False	GATAAA	-28
PB.7076.9	chr2	+	4983	28	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	1	-777	combination_of_known_junctions	FALSE	canonical	1	24284	junction_1	90227.7286007767	NA	1	NA	TRUE	NA	NA	NA	C	coding	1299	3900	113	4012	20.0	-7	True	GATAAA	-31
PB.7076.8	chr2	+	3451	25	incomplete-splice_match	GIGYF2	ENST00000373563.8	5847	29	17	14070	1	-2	3prime_fragment	FALSE	canonical	1	153177	junction_2	80917.17789169736	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3273	179	3451	80.0	-7	True	NA	NA
PB.7969.9	chr3	-	3318	23	novel_in_catalog	TBC1D5	novel	7854	22	NA	NA	-1	-18	combination_of_known_junctions	FALSE	canonical	1	7796	junction_21	94838.60771170259	NA	2	1	TRUE	NA	NA	NA	C	coding	795	2388	358	2745	85.0	1	True	AATAGA	-35
PB.7076.5	chr2	+	5076	29	full-splice_match	GIGYF2	ENST00000373563.8	5847	29	1	770	0	-766	multi-exon	FALSE	canonical	1	153177	junction_2	81155.50779955776	NA	2	NA	TRUE	NA	NA	NA	C	coding	1299	3900	195	4094	15.0	-63	False	GATAAA	-42
PB.7076.4	chr2	+	5844	29	full-splice_match	GIGYF2	ENST00000373563.8	5847	29	18	-15	2	0	multi-exon	FALSE	canonical	1	153177	junction_2	81155.50779955776	NA	1	NA	TRUE	NA	NA	NA	C	coding	1299	3900	178	4077	15.0	-6	True	AATAAA	-33
PB.7076.7	chr2	+	2569	21	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	1	71305	junction_2	95720.5475658701	NA	2	1	TRUE	NA	NA	NA	C	coding	773	2319	250	2568	60.0	-8	True	NA	NA
PB.7076.6	chr2	+	3389	24	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	24284	junction_1	91459.13282497493	NA	0	NA	TRUE	NA	NA	NA	C	coding	1091	3273	117	3389	80.0	-11	True	NA	NA
PB.7076.1	chr2	+	3543	26	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	2	-3	combination_of_known_junctions	TRUE	canonical	1	35876	junction_2	102790.3590564329	NA	2	1	TRUE	NA	NA	NA	C	coding	1090	3270	272	3541	80.0	-70	False	NA	NA
PB.7834.1	chr22	-	3576	4	full-splice_match	TCF20	ENST00000335626.8	6237	4	3641	-980	-1591	-63	multi-exon	FALSE	canonical	1	137374	junction_1	50496.82883992705	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	17	2311	90.0	7554	False	GATAAA	-28
PB.7076.3	chr2	+	2521	20	incomplete-splice_match	GIGYF2	ENST00000373563.8	5847	29	-6	41630	2	-11	3prime_fragment	TRUE	canonical	1	153177	junction_2	75095.61906978118	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2319	202	2520	60.0	-70	False	NA	NA
PB.7076.2	chr2	+	3510	1	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	2	-5137	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-70	False	GATAAA	-31
PB.3631.4	chr14	+	3294	9	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22236	10632	no_combination_of_known_junctions	FALSE	canonical	1	8519	junction_1	183695.23081685972	NA	0	NA	TRUE	NA	NA	NA	B	coding	317	954	158	1111	15.0	-41	False	AATAAA	-18
PB.3631.5	chr14	+	2726	11	full-splice_match	UBR7	ENST00000013070.10	3694	11	185	783	0	-783	multi-exon	FALSE	canonical	1	256567	junction_3	71293.25981668955	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	52	1329	15.0	-29	True	AATAAA	-38
PB.5634.15	chr19	+	1829	4	incomplete-splice_match	UHRF1	ENST00000624301.3	3898	17	44937	-2	44060	-1	5prime_fragment	FALSE	canonical	1	90	junction_1	45.02098276236192	NA	1	NA	TRUE	NA	NA	NA	C	coding	22	69	411	479	15.0	NA	False	AATAAA	-17
PB.10839.1	chr7	+	3921	1	incomplete-splice_match	KLHDC10	ENST00000335420.9	6437	10	61290	0	15355	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-31
PB.3631.6	chr14	+	3475	11	full-splice_match	UBR7	ENST00000013070.10	3694	11	213	6	-25	-6	multi-exon	FALSE	canonical	1	256567	junction_3	71293.25981668955	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	24	1301	35.0	-1	True	AATAAA	-9
PB.5634.10	chr19	+	2946	12	incomplete-splice_match	UHRF1	ENST00000624301.3	3898	17	32029	0	31152	0	5prime_fragment	FALSE	canonical	1	90	junction_9	112152.50295538225	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	81	1598	15.0	NA	False	AATAAA	-15
PB.3631.7	chr14	+	3364	10	full-splice_match	UBR7	ENST00000553674.1	1276	10	3	-2091	3	-6	multi-exon	FALSE	canonical	1	8519	junction_1	139292.63631073633	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	141	1190	35.0	-24	True	AATAAA	-9
PB.7193.8	chr20	+	2956	20	full-splice_match	SEC23B	ENST00000336714.8	3464	20	421	87	1	-87	multi-exon	FALSE	canonical	1	304885	junction_1	189067.0767791464	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	65	2368	20.0	1	True	NA	NA
PB.10092.30	chr6	-	2047	11	full-splice_match	SYNCRIP	ENST00000616122.4	6764	11	-70	4787	-1	1534	multi-exon	FALSE	canonical	1	75283	junction_7	348768.3347548054	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	343	1737	20.0	1082	False	AATAAA	-23
PB.8491.2	chr3	+	1313	10	full-splice_match	RSRC1	ENST00000295930.7	1727	10	37	377	0	15	multi-exon	FALSE	canonical	1	105561	junction_7	102835.11716779234	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	126	1130	70.0	0	True	ATTAAA	-12
PB.10092.31	chr6	-	2062	13	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-28081	-54670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	354781.74013383064	NA	0	NA	TRUE	NA	NA	NA	B	coding	562	1689	140	1828	50.0	1	True	ATTAAA	-20
PB.11110.7	chr8	+	3493	22	full-splice_match	IKBKB	ENST00000520810.6	3938	22	2	443	2	-20	multi-exon	FALSE	canonical	1	82115	junction_1	87085.4030442455	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	185	2455	25.0	-14	True	ACTAAA	-17
PB.3631.2	chr14	+	3336	11	novel_in_catalog	TMEM251	novel	909	2	NA	NA	-29	42105	no_combination_of_known_junctions	FALSE	canonical	1	863	junction_1	134429.84815300506	NA	4	1	TRUE	NA	NA	NA	B	coding	274	825	353	1177	70.0	9	True	NA	NA
PB.5667.2	chr19	+	2793	18	novel_in_catalog	AC008763.2	novel	537	7	NA	NA	7288	4824	intron_retention	FALSE	canonical	1	272539	junction_1	169355.54253076357	NA	1	NA	TRUE	NA	NA	NA	A	coding	528	1587	1145	2731	20.0	3	True	AATAAA	-20
PB.9299.11	chr5	+	3699	15	novel_in_catalog	POLK	novel	5911	15	NA	NA	0	-24	no_combination_of_known_junctions	FALSE	canonical	1	2427	junction_1	67557.96246568799	NA	6	1	TRUE	NA	NA	NA	C	coding	804	2415	225	2639	85.0	0	True	NA	NA
PB.6982.12	chr2	-	2661	10	full-splice_match	LANCL1	ENST00000450366.6	4602	10	39	1902	11	964	multi-exon	FALSE	canonical	1	216538	junction_9	115106.63941078483	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	126	1325	55.0	0	True	NA	NA
PB.3631.3	chr14	+	3442	10	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22232	10608	no_combination_of_known_junctions	TRUE	canonical	1	3045	junction_9	131131.5768018642	NA	1	NA	TRUE	NA	NA	NA	B	coding	376	1131	68	1198	70.0	-45	False	NA	NA
PB.6982.14	chr2	-	2307	10	full-splice_match	LANCL1	ENST00000450366.6	4602	10	28	2267	0	599	multi-exon	FALSE	canonical	1	216538	junction_9	115106.63941078483	NA	3	NA	TRUE	NA	NA	NA	C	coding	399	1200	137	1336	25.0	-11	True	CATAAA	-18
PB.6982.15	chr2	-	1625	10	full-splice_match	LANCL1	ENST00000431941.6	1270	10	36	-391	0	19	multi-exon	FALSE	canonical	1	34456	junction_9	157186.7963454098	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	35	1234	20.0	-11	True	GATAAA	-26
PB.10573.4	chr7	+	1490	6	full-splice_match	CRCP	ENST00000395326.7	3009	6	233	1286	-3	-14	multi-exon	FALSE	canonical	1	316119	junction_1	31571.901881261445	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	126	572	70.0	-12	True	NA	NA
PB.6834.3	chr2	-	2962	18	full-splice_match	SLC25A12	ENST00000422440.6	2979	18	16	1	8	-1	multi-exon	FALSE	canonical	1	158172	junction_17	57265.316571262585	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	23	2059	25.0	7	True	AATAAA	-17
PB.9895.4	chr6	-	2042	7	full-splice_match	AGPAT1	ENST00000375104.6	2017	7	-28	3	-11	-3	multi-exon	FALSE	canonical	1	11270	junction_6	406672.10646843264	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	130	981	10.0	-8	True	AATAAA	-10
PB.7223.5	chr20	+	816	7	novel_not_in_catalog	FRG1BP	novel	761	9	NA	NA	-140	77	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	102533.56670866375	NA	2	NA	TRUE	NA	NA	NA	B	coding	104	315	402	716	20.0	52	True	AATAAA	-26
PB.7223.4	chr20	+	5429	1	genic	FRG1BP	novel	NA	NA	NA	NA	-161	-16618	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	31	True	NA	NA
PB.7223.6	chr20	+	2251	4	novel_not_in_catalog	FRG1BP	novel	761	9	NA	NA	-91	75	intron_retention	FALSE	non_canonical	0	0	junction_3	111245.78052522561	NA	9	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-37	False	AATAAA	-24
PB.7223.1	chr20	+	3593	8	novel_not_in_catalog	FRG1BP	novel	761	9	NA	NA	-176	77	intron_retention	FALSE	non_canonical	0	0	junction_3	89326.22117581723	NA	13	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	16	True	AATAAA	-26
PB.7223.3	chr20	+	2417	7	novel_not_in_catalog	FRG1BP	novel	761	9	NA	NA	-165	77	intron_retention	FALSE	canonical	1	63500	junction_1	75047.12564041936	NA	3	NA	TRUE	NA	NA	NA	B	coding	101	306	827	1132	20.0	27	True	AATAAA	-26
PB.7223.2	chr20	+	2131	7	novel_not_in_catalog	FRG1BP	novel	761	9	NA	NA	-175	77	intron_retention	FALSE	canonical	1	72155	junction_4	68211.63973110128	NA	3	NA	TRUE	NA	NA	NA	B	coding	101	306	541	846	20.0	17	True	AATAAA	-26
PB.234.5	chr1	-	2227	7	novel_not_in_catalog	SRSF4	novel	2387	6	NA	NA	0	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	344883.7442615829	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	131	1564	35.0	15	True	AATAAA	-18
PB.10571.3	chr7	-	2292	11	novel_in_catalog	GUSB	novel	2300	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	23287	junction_7	271737.07614928077	NA	2	1	TRUE	NA	NA	NA	C	coding	257	774	31	804	45.0	-1	True	AATAAA	-25
PB.1198.7	chr1	+	3115	5	full-splice_match	SPRTN	ENST00000295050.11	3468	5	211	142	3	-142	multi-exon	FALSE	canonical	1	118706	junction_4	8196.071772501751	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	126	1595	35.0	-34	True	NA	NA
PB.6894.6	chr2	+	2692	13	novel_not_in_catalog	GULP1	novel	2643	13	NA	NA	21	0	any annotated donor/acceptor	FALSE	canonical	1	476	junction_3	77172.63463184882	NA	6	NA	TRUE	NA	NA	NA	C	coding	291	876	769	1644	85.0	9	True	NA	NA
PB.6894.7	chr2	+	2309	11	novel_in_catalog	GULP1	novel	2643	13	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	1676	junction_1	64949.86368084232	NA	2	1	TRUE	NA	NA	NA	C	coding	304	915	347	1261	85.0	-9	True	NA	NA
PB.6894.4	chr2	+	2420	13	novel_in_catalog	GULP1	novel	2643	13	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	81247.79545534862	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	458	1372	85.0	-2328	False	NA	NA
PB.6894.2	chr2	+	2596	13	novel_in_catalog	GULP1	novel	2643	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	19763	junction_10	73612.76188817776	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	409	1548	85.0	-3	True	NA	NA
PB.6894.3	chr2	+	2298	12	full-splice_match	GULP1	ENST00000409830.5	1376	12	128	-1050	-9	2	multi-exon	FALSE	canonical	1	89067	junction_1	39614.50243355142	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	334	1248	75.0	-29	True	NA	NA
PB.3290.3	chr14	+	1882	3	full-splice_match	APEX1	ENST00000557159.5	1803	3	-49	-30	0	1	multi-exon	FALSE	canonical	1	2834656	junction_2	156028.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	0	True	AATAAA	-16
PB.916.3	chr1	+	3002	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	-24	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	97	579	25.0	-1	True	AATAAA	-21
PB.6894.8	chr2	+	3231	12	full-splice_match	GULP1	ENST00000409830.5	1376	12	53	-1908	-16	-7	multi-exon	FALSE	canonical	1	89067	junction_1	39614.50243355142	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	409	1323	60.0	-3	True	AATAAA	-8
PB.6894.9	chr2	+	2516	13	novel_in_catalog	GULP1	novel	2643	13	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	1	19763	junction_10	76017.10141401662	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	329	1468	85.0	-1347	False	NA	NA
PB.5986.3	chr19	+	3816	14	novel_in_catalog	SAMD4B	novel	672	4	NA	NA	12	0	intron_retention	FALSE	canonical	1	137370	junction_1	129620.80201118827	NA	0	NA	TRUE	NA	NA	NA	B	coding	694	2085	364	2448	90.0	-1645	False	ATTAAA	-17
PB.5986.2	chr19	+	3614	14	novel_in_catalog	SAMD4B	novel	672	4	NA	NA	5	0	intron_retention	FALSE	canonical	1	23688	junction_13	169104.66141787588	NA	2	NA	TRUE	NA	NA	NA	B	coding	692	2079	371	2449	90.0	-1652	False	ATTAAA	-17
PB.5986.1	chr19	+	3925	15	novel_in_catalog	SAMD4B	novel	672	4	NA	NA	5	0	intron_retention	FALSE	canonical	1	14525	junction_1	180273.29817151997	NA	3	1	TRUE	NA	NA	NA	B	coding	694	2085	473	2557	90.0	-1652	False	ATTAAA	-17
PB.9560.3	chr5	+	4292	24	incomplete-splice_match	TCOF1	ENST00000643257.1	5019	27	97	3450	18	-1586	3prime_fragment	FALSE	canonical	1	220011	junction_7	111756.24286354397	NA	0	NA	TRUE	NA	NA	NA	B	coding	1328	3984	307	4290	15.0	97	False	AAGAAA	-12
PB.5986.6	chr19	+	3136	10	incomplete-splice_match	SAMD4B	ENST00000610417.4	3664	12	13300	0	430	0	intron_retention	FALSE	canonical	1	410882	junction_7	62338.14295724589	NA	4	NA	TRUE	NA	NA	NA	B	coding	456	1371	185	1555	90.0	NA	False	ATTAAA	-17
PB.9560.1	chr5	+	4297	24	incomplete-splice_match	TCOF1	ENST00000445265.6	4825	26	-22	1859	5	4	3prime_fragment	TRUE	canonical	1	62570	junction_6	127027.50973323992	NA	0	NA	TRUE	NA	NA	NA	B	coding	1398	4194	104	4297	70.0	-60	False	NA	NA
PB.5986.4	chr19	+	3844	1	novel_in_catalog	SAMD4B	novel	672	4	NA	NA	2844	-3334	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	110	333	868	1200	70.0	1187	False	NA	NA
PB.11537.3	chr9	-	4935	11	full-splice_match	RNF38	ENST00000350199.8	5104	11	168	1	117	-1	multi-exon	FALSE	canonical	1	43202	junction_10	73118.9967174058	NA	2	NA	TRUE	NA	NA	NA	C	coding	427	1284	305	1588	25.0	6	True	AATAAA	-16
PB.8836.1	chr4	+	6491	10	novel_in_catalog	SHROOM3	novel	11020	11	NA	NA	-85	606	combination_of_known_junctions	FALSE	canonical	1	36145	junction_1	40000.36751250921	NA	3	NA	TRUE	NA	NA	NA	B	coding	1820	5463	423	5885	35.0	-3909	False	AATGAA	-10
PB.8836.2	chr4	+	2951	5	incomplete-splice_match	SHROOM3	ENST00000646790.1	5794	10	114613	-606	38129	606	5prime_fragment	FALSE	canonical	1	123282	junction_1	19865.590011373937	NA	0	NA	TRUE	NA	NA	NA	B	coding	738	2217	129	2345	35.0	5291	False	AATGAA	-10
PB.8080.33	chr3	-	2558	14	incomplete-splice_match	SMARCC1	ENST00000254480.9	6375	28	54	99670	18	-4719	3prime_fragment	FALSE	canonical	1	438864	junction_13	145800.78028301528	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	67	1455	10.0	29	True	NA	NA
PB.9560.9	chr5	+	4276	24	novel_in_catalog	TCOF1	novel	4194	23	NA	NA	-7	-1586	combination_of_known_junctions	FALSE	canonical	1	40055	junction_17	164490.10706500587	NA	0	NA	TRUE	NA	NA	NA	B	coding	1408	4224	51	4274	15.0	-7	True	AAGAAA	-12
PB.9560.8	chr5	+	4282	23	incomplete-splice_match	TCOF1	ENST00000439160.6	4644	26	-17	3199	-7	-1586	3prime_fragment	FALSE	canonical	1	128627	junction_19	128821.40030582703	NA	1	NA	TRUE	NA	NA	NA	B	coding	1410	4230	51	4280	15.0	-7	True	AAGAAA	-12
PB.5521.2	chr18	+	2625	2	full-splice_match	SOCS6	ENST00000397942.3	5848	2	139	3084	139	0	multi-exon	FALSE	canonical	1	63419	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	178	1785	20.0	-5	True	ATTAAA	-18
PB.5521.3	chr18	+	2553	2	full-splice_match	SOCS6	ENST00000397942.3	5848	2	106	3189	106	-105	multi-exon	FALSE	canonical	1	63419	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	211	1818	30.0	-50	False	AATAAA	-41
PB.5521.1	chr18	+	5718	2	full-splice_match	SOCS6	ENST00000397942.3	5848	2	125	5	125	-5	multi-exon	FALSE	canonical	1	63419	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	192	1799	25.0	-19	True	AATAAA	-14
PB.5521.6	chr18	+	2279	2	full-splice_match	SOCS6	ENST00000397942.3	5848	2	128	3441	128	-357	multi-exon	FALSE	canonical	1	63419	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	189	1796	30.0	-16	True	AATAAA	-40
PB.5521.7	chr18	+	2721	3	novel_not_in_catalog	SOCS6	novel	5848	2	NA	NA	144	-100	any annotated donor/acceptor	FALSE	canonical	1	6095	junction_2	855.5	NA	2	1	TRUE	NA	NA	NA	C	coding	535	1608	374	1981	20.0	0	True	ATTAAA	-31
PB.5521.4	chr18	+	5940	3	novel_not_in_catalog	SOCS6	novel	5848	2	NA	NA	112	3	any annotated donor/acceptor	FALSE	canonical	1	6095	junction_2	855.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	406	2013	25.0	-32	True	AATAAA	-22
PB.5521.5	chr18	+	2184	2	full-splice_match	SOCS6	ENST00000397942.3	5848	2	121	3543	121	-459	multi-exon	FALSE	canonical	1	63419	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	535	1608	196	1803	45.0	-23	True	AGTAAA	-15
PB.7785.1	chr22	-	3184	5	full-splice_match	CBX6	ENST00000407418.7	6122	5	43	2895	-22	-116	multi-exon	FALSE	canonical	1	367694	junction_1	56461.98583726488	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	82	1320	15.0	21	True	NA	NA
PB.5521.8	chr18	+	3833	2	full-splice_match	SOCS6	ENST00000397942.3	5848	2	144	1871	144	1213	multi-exon	FALSE	canonical	1	63419	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	173	1780	15.0	0	True	AATAAA	-13
PB.5521.9	chr18	+	2765	3	novel_not_in_catalog	SOCS6	novel	5848	2	NA	NA	146	1	any annotated donor/acceptor	FALSE	canonical	1	2485	junction_2	2660.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	317	1924	20.0	2	True	ATTAAA	-19
PB.2805.7	chr12	+	1899	6	full-splice_match	MRPL42	ENST00000549982.5	15582	6	27	13656	-1	-64	multi-exon	FALSE	canonical	1	387487	junction_1	196830.533041599	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	135	563	20.0	-2	True	AGTAAA	-21
PB.7785.5	chr22	-	2926	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	-28	-30	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	187097.0013976707	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	88	597	90.0	15	True	NA	NA
PB.2244.1	chr11	+	2717	1	incomplete-splice_match	YAP1	ENST00000282441.9	5386	9	120246	0	3734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATATA	-19
PB.7785.7	chr22	-	2696	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	11	-116	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	187097.0013976707	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	16	453	15.0	10	True	NA	NA
PB.10202.6	chr6	+	1849	13	full-splice_match	TRMT11	ENST00000334379.10	1565	13	99	-383	3	-5	multi-exon	FALSE	canonical	1	92742	junction_6	66409.81231004614	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	23	1414	35.0	-11	True	AATAAA	-17
PB.10571.5	chr7	-	3348	8	novel_in_catalog	GUSB	novel	2300	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	65282	junction_3	272755.0753792546	NA	3	NA	TRUE	NA	NA	NA	C	coding	359	1080	29	1108	45.0	1	True	AATAAA	-24
PB.10202.1	chr6	+	2486	15	incomplete-splice_match	TRMT11	ENST00000648977.1	4437	23	-84	164545	-7	-4	3prime_fragment	FALSE	canonical	1	7174	junction_10	104489.14208038019	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	129	821	35.0	-295	False	AATAAA	-18
PB.5502.3	chr18	+	4324	1	genic	PMAIP1	novel	NA	NA	NA	NA	-20	13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	ATTAAA	-28
PB.5502.2	chr18	+	1081	2	full-splice_match	PMAIP1	ENST00000316660.6	1948	2	48	819	-20	-50	multi-exon	FALSE	canonical	1	822836	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	AGTAAA	-18
PB.5502.1	chr18	+	1640	2	full-splice_match	PMAIP1	ENST00000316660.6	1948	2	48	260	-20	-260	multi-exon	FALSE	canonical	1	822836	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	ATTAAA	-16
PB.3290.1	chr14	+	2579	1	genic	APEX1	novel	NA	NA	NA	NA	-4	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-4	True	AATAAA	-13
PB.5502.7	chr18	+	2049	3	full-splice_match	PMAIP1	ENST00000269518.9	1262	3	-20	-767	-20	-2	multi-exon	FALSE	canonical	1	3270	junction_2	2888.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	183	593	10.0	0	True	ATTAAA	-13
PB.5502.6	chr18	+	3033	1	novel_in_catalog	PMAIP1	novel	1948	2	NA	NA	-20	65	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-14
PB.5502.5	chr18	+	3249	2	full-splice_match	PMAIP1	ENST00000316660.6	1948	2	48	-1349	-20	1349	multi-exon	FALSE	canonical	1	822836	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	TATAAA	-14
PB.5502.4	chr18	+	3534	1	novel_in_catalog	PMAIP1	novel	1948	2	NA	NA	-20	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	AATAAA	-31
PB.9949.1	chr6	-	4392	11	full-splice_match	FKBP5	ENST00000357266.8	3772	11	22	-642	0	637	multi-exon	FALSE	canonical	1	554604	junction_10	105808.02207413198	NA	3	NA	TRUE	NA	NA	NA	C	coding	457	1374	132	1505	45.0	-1	True	AATAAA	-30
PB.5502.9	chr18	+	2076	1	novel_in_catalog	PMAIP1	novel	1948	2	NA	NA	-20	-892	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	NA	NA
PB.5502.8	chr18	+	1902	2	full-splice_match	PMAIP1	ENST00000316660.6	1948	2	48	-2	-20	2	multi-exon	FALSE	canonical	1	822836	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	ATTAAA	-17
PB.9949.4	chr6	-	3883	12	novel_not_in_catalog	FKBP5	novel	3827	11	NA	NA	-2	-17	any annotated donor/acceptor	FALSE	canonical	1	9624	junction_10	292241.2015720027	NA	2	NA	TRUE	NA	NA	NA	C	coding	457	1374	282	1655	50.0	-4	True	TTTAAA	-4
PB.9949.5	chr6	-	3250	11	full-splice_match	FKBP5	ENST00000357266.8	3772	11	-28	550	-23	-550	multi-exon	FALSE	canonical	1	554604	junction_10	105808.02207413198	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	182	1555	10.0	-25	False	ACTAAA	-17
PB.9949.6	chr6	-	2405	11	full-splice_match	FKBP5	ENST00000357266.8	3772	11	-6	1373	-1	-1373	multi-exon	FALSE	canonical	1	554604	junction_10	105808.02207413198	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	160	1533	20.0	-3	True	AATACA	-14
PB.6010.3	chr19	-	2723	7	novel_not_in_catalog	C19orf54	novel	2753	6	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	1711	junction_6	45416.667422935774	NA	3	1	TRUE	NA	NA	NA	C	coding	170	513	516	1028	15.0	-60	True	AATAAA	-18
PB.234.6	chr1	-	2680	9	novel_in_catalog	SRSF4	novel	2387	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	26529	junction_8	402807.0546815032	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	1008	2123	80.0	2	True	NA	NA
PB.6010.1	chr19	-	2519	6	full-splice_match	C19orf54	ENST00000470681.5	2521	6	2	0	2	0	multi-exon	FALSE	canonical	1	36291	junction_5	31846.793655876878	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	403	942	15.0	-47	True	AATAAA	-19
PB.6010.6	chr19	-	2640	7	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	36291	junction_6	27989.504323049383	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	425	1066	15.0	-47	True	AATAAA	-16
PB.6010.7	chr19	-	2163	7	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	19	2	intron_retention	FALSE	canonical	1	2733	junction_1	38960.33218865055	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	671	1666	15.0	-30	True	AATAAA	-16
PB.6010.5	chr19	-	3207	5	incomplete-splice_match	C19orf54	ENST00000470681.5	2521	6	-12	3	-12	2	intron_retention	FALSE	canonical	1	54545	junction_2	24301.870061787427	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	1094	1633	15.0	-61	True	AATAAA	-16
PB.6010.8	chr19	-	1811	10	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	6182	junction_3	40459.852798106476	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	383	1219	15.0	-5	True	AATAAA	-16
PB.6010.9	chr19	-	3747	5	novel_in_catalog	C19orf54	novel	2753	6	NA	NA	15	0	intron_retention	FALSE	canonical	1	66978	junction_3	16330.825673783307	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	1535	2176	15.0	-34	True	AATAAA	-13
PB.5070.1	chr17	+	2887	5	novel_in_catalog	TBX21	novel	2572	6	NA	NA	-8	1	intron_retention	FALSE	canonical	1	29646	junction_1	20195.481771921164	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	1222	2133	15.0	0	True	AATAAA	-14
PB.5070.3	chr17	+	2580	6	full-splice_match	TBX21	ENST00000177694.1	2572	6	-8	0	-8	0	multi-exon	FALSE	canonical	1	29646	junction_1	18951.8842925974	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	220	1827	15.0	0	True	AATAAA	-13
PB.5070.2	chr17	+	2784	5	incomplete-splice_match	TBX21	ENST00000177694.1	2572	6	-8	0	-8	0	intron_retention	FALSE	canonical	1	29646	junction_1	18434.020863270714	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	220	1212	15.0	0	True	AATAAA	-13
PB.8606.3	chr3	+	3043	2	intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	408	1227	947	2173	30.0	-2	True	TATAAA	-18
PB.4249.4	chr16	-	2270	4	full-splice_match	LITAF	ENST00000571688.5	2632	4	94	268	94	9	multi-exon	FALSE	canonical	1	17908	junction_3	641683.276911766	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	138	623	15.0	-4	True	AATAAA	-29
PB.9516.2	chr5	+	4888	1	full-splice_match	PCDHB12	ENST00000239450.4	3853	1	0	-1035	0	1035	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	795	2388	190	2577	35.0	0	True	AATAAA	-14
PB.4249.5	chr16	-	2165	4	full-splice_match	LITAF	ENST00000622633.4	2467	4	29	273	-2	0	multi-exon	FALSE	canonical	1	576206	junction_3	400020.3360055586	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	42	527	25.0	-3	True	AATAAA	-20
PB.5153.1	chr17	-	2445	1	antisense	novelGene_VMP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	-2664	False	NA	NA
PB.5153.2	chr17	-	2101	1	antisense	novelGene_VMP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-2499	False	TATAAA	-41
PB.10235.18	chr6	+	4427	9	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	43	-215	intron_retention	FALSE	canonical	1	18466	junction_1	236593.92678988905	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	278	2650	35.0	-2	True	AATAAA	-28
PB.6937.7	chr2	+	2806	12	novel_in_catalog	BZW1	novel	578	6	NA	NA	-10	429	combination_of_known_junctions	FALSE	canonical	1	396	junction_10	857533.1559440459	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	58	1317	15.0	-10	True	AATAAA	-32
PB.6937.4	chr2	+	1857	12	novel_in_catalog	BZW1	novel	578	6	NA	NA	8	41	combination_of_known_junctions	FALSE	canonical	1	396	junction_10	853345.8088533841	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	185	1444	40.0	8	True	ATTAAA	-14
PB.4249.7	chr16	-	1740	5	full-splice_match	LITAF	ENST00000574763.5	717	5	0	-1023	0	0	multi-exon	FALSE	canonical	1	1879	junction_4	675972.9442392647	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	221	706	95.0	-1	True	NA	NA
PB.6937.2	chr2	+	2934	12	novel_in_catalog	BZW1	novel	578	6	NA	NA	7	429	combination_of_known_junctions	FALSE	canonical	1	396	junction_10	853345.8088533841	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	186	1445	15.0	7	True	AATAAA	-32
PB.6937.3	chr2	+	3101	12	novel_in_catalog	BZW1	novel	578	6	NA	NA	8	597	combination_of_known_junctions	FALSE	canonical	1	396	junction_10	853345.8088533841	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	185	1444	25.0	8	True	AATAAA	-16
PB.9304.9	chr5	+	3344	14	full-splice_match	AGGF1	ENST00000312916.11	4509	14	22	1143	-3	-1143	multi-exon	FALSE	canonical	1	176419	junction_4	57597.71311093408	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	361	2505	45.0	0	True	AATAAA	-15
PB.9304.8	chr5	+	4463	14	full-splice_match	AGGF1	ENST00000312916.11	4509	14	22	24	-3	-24	multi-exon	FALSE	canonical	1	176419	junction_4	57597.71311093408	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	361	2505	25.0	0	True	CATAAA	-31
PB.9304.7	chr5	+	1852	1	novel_in_catalog	AGGF1	novel	552	4	NA	NA	-9	-3806	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	109	330	367	696	100.0	-6	True	AATACA	-9
PB.9304.6	chr5	+	2811	14	full-splice_match	AGGF1	ENST00000312916.11	4509	14	14	1684	-11	-1684	multi-exon	FALSE	canonical	1	176419	junction_4	57597.71311093408	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	369	2513	55.0	-8	True	NA	NA
PB.9304.5	chr5	+	2933	14	full-splice_match	AGGF1	ENST00000312916.11	4509	14	10	1566	10	-1566	multi-exon	FALSE	canonical	1	176419	junction_4	57597.71311093408	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	373	2517	20.0	-12	True	AATAAA	-14
PB.9304.4	chr5	+	3411	15	novel_not_in_catalog	AGGF1	novel	552	4	NA	NA	6	-1143	any annotated donor/acceptor	FALSE	canonical	1	3338	junction_13	105706.90522887484	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	377	2239	45.0	-16	True	AATAAA	-15
PB.9304.3	chr5	+	2721	14	full-splice_match	AGGF1	ENST00000312916.11	4509	14	-6	1794	-6	-1794	multi-exon	FALSE	canonical	1	176419	junction_4	57597.71311093408	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	389	2533	45.0	-28	True	AATAAA	-14
PB.9304.2	chr5	+	2055	11	incomplete-splice_match	AGGF1	ENST00000312916.11	4509	14	-4	9685	-4	-9685	3prime_fragment	FALSE	canonical	1	176419	junction_4	57627.54326613273	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1668	387	2054	70.0	-26	True	AAAAAG	-7
PB.9304.1	chr5	+	4032	14	novel_not_in_catalog	AGGF1	novel	552	4	NA	NA	-16	-24	any annotated donor/acceptor	FALSE	canonical	1	1329	junction_1	90040.65601761706	NA	3	NA	TRUE	NA	NA	NA	C	coding	399	1200	875	2074	25.0	-38	True	CATAAA	-31
PB.6937.9	chr2	+	1884	12	full-splice_match	BZW1	ENST00000409600.5	6875	12	361	4630	-3	158	multi-exon	FALSE	canonical	1	396	junction_10	886544.858005029	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	95	1354	25.0	-3	True	NA	NA
PB.9171.1	chr5	-	6802	7	full-splice_match	SLC45A2	ENST00000296589.8	1772	7	34	-5064	34	5064	multi-exon	FALSE	canonical	1	14573	junction_1	3191.4478776184883	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	114	1706	25.0	-4	True	AATAAA	-30
PB.11366.2	chr8	+	2204	2	full-splice_match	THEM6	ENST00000336138.3	2259	2	53	2	53	0	multi-exon	FALSE	canonical	1	189683	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	92	718	15.0	-18	True	ATTAAA	-14
PB.8320.8	chr3	-	2564	6	novel_not_in_catalog	CD80	novel	2725	7	NA	NA	7513	229	any annotated donor/acceptor	FALSE	canonical	1	630	junction_5	30070.357067384484	NA	5	NA	TRUE	NA	NA	NA	C	coding	257	774	67	840	25.0	9893	False	AATATA	-22
PB.780.66	chr1	-	2752	1	novel_in_catalog	ADAR	novel	6537	15	NA	NA	-16	-3247	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-17	True	NA	NA
PB.9171.3	chr5	-	2609	7	full-splice_match	SLC45A2	ENST00000296589.8	1772	7	65	-902	-21	902	multi-exon	FALSE	canonical	1	14573	junction_1	3191.4478776184883	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	83	1675	5.0	-12	True	AGTAAA	-21
PB.11366.4	chr8	+	3028	2	novel_not_in_catalog	THEM6	novel	2259	2	NA	NA	57	-5537	intron_retention	FALSE	canonical	1	811	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	88	858	40.0	-14	True	NA	NA
PB.9171.2	chr5	-	2838	7	full-splice_match	SLC45A2	ENST00000296589.8	1772	7	24	-1090	24	1090	multi-exon	FALSE	canonical	1	14573	junction_1	3191.4478776184883	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	124	1716	20.0	-14	True	NA	NA
PB.8091.1	chr3	-	1711	4	full-splice_match	SHISA5	ENST00000426002.5	1839	4	127	1	-2	0	multi-exon	FALSE	canonical	1	1156486	junction_3	372197.8013700063	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	68	481	5.0	9	True	AATAAA	-14
PB.455.12	chr1	+	6761	5	full-splice_match	AK4	ENST00000327299.7	6836	5	79	-4	79	4	multi-exon	FALSE	canonical	1	102	junction_4	14889.015279728877	NA	5	NA	TRUE	NA	NA	NA	C	coding	223	672	127	798	20.0	-764	False	AATAAA	-22
PB.8091.3	chr3	-	2159	7	novel_not_in_catalog	SHISA5	novel	2385	7	NA	NA	-17	0	intron_retention	FALSE	canonical	1	300	junction_4	706181.501695484	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	513	929	5.0	-26	True	AATAAA	-14
PB.8091.2	chr3	-	2224	6	full-splice_match	SHISA5	ENST00000296444.6	2369	6	66	79	66	0	multi-exon	FALSE	canonical	1	193902	junction_5	627510.542751084	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	272	994	5.0	473	False	AATAAA	-14
PB.769.7	chr1	-	2262	7	incomplete-splice_match	GATAD2B	ENST00000368655.4	7478	11	4	10742	-3	3358	3prime_fragment	FALSE	canonical	1	90664	junction_6	61073.970676731195	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	241	1488	60.0	0	True	NA	NA
PB.8091.4	chr3	-	1828	4	novel_not_in_catalog	SHISA5	novel	2385	7	NA	NA	-30	0	intron_retention	FALSE	canonical	1	11792	junction_2	539791.0259908201	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	1062	1484	5.0	0	True	AATAAA	-14
PB.455.13	chr1	+	4257	5	full-splice_match	AK4	ENST00000327299.7	6836	5	-22	2601	-22	-2601	multi-exon	FALSE	canonical	1	102	junction_4	14889.015279728877	NA	17	NA	TRUE	NA	NA	NA	C	coding	223	672	228	899	75.0	-22	True	NA	NA
PB.4984.6	chr17	-	2483	13	novel_not_in_catalog	DHX58	novel	782	3	NA	NA	264	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	30968.171358760523	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	94	2130	30.0	1	True	NA	NA
PB.4984.7	chr17	-	2743	13	incomplete-splice_match	DHX58	ENST00000251642.7	2617	14	267	6	-3	-6	5prime_fragment	FALSE	canonical	1	77060	junction_12	14669.608893332274	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	356	2392	30.0	8889	False	NA	NA
PB.4984.4	chr17	-	2574	14	novel_not_in_catalog	DHX58	novel	782	3	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	3038	junction_2	37410.72888970718	NA	1	1	TRUE	NA	NA	NA	C	coding	671	2016	206	2221	30.0	0	True	NA	NA
PB.4984.5	chr17	-	2403	13	novel_in_catalog	DHX58	novel	782	3	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	11215	junction_2	33783.51106545503	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	205	1779	30.0	-1	True	NA	NA
PB.4984.2	chr17	-	2816	12	novel_in_catalog	DHX58	novel	782	3	NA	NA	5	-4	intron_retention	FALSE	canonical	1	11215	junction_2	29449.57625366893	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	618	2192	30.0	-15	True	NA	NA
PB.4984.3	chr17	-	2578	14	full-splice_match	DHX58	ENST00000251642.7	2617	14	35	4	15	-4	multi-exon	FALSE	canonical	1	26710	junction_13	24009.99553440463	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	189	2225	30.0	15	True	NA	NA
PB.4984.1	chr17	-	3738	11	novel_in_catalog	DHX58	novel	782	3	NA	NA	518	-4	intron_retention	FALSE	canonical	1	88970	junction_4	11710.821725651876	NA	3	NA	TRUE	NA	NA	NA	C	coding	585	1758	54	1811	30.0	9410	False	NA	NA
PB.8320.2	chr3	-	4028	7	full-splice_match	CD80	ENST00000264246.7	2725	7	-21	-1282	-21	1282	multi-exon	FALSE	canonical	1	50720	junction_1	16636.31122641742	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	385	1251	20.0	-10	True	ATTAAA	-19
PB.9171.6	chr5	-	2563	5	full-splice_match	SLC45A2	ENST00000510600.1	740	5	-425	-1398	-18	-4	multi-exon	FALSE	canonical	1	1547	junction_4	8796.250291317318	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	80	1285	20.0	-9	True	NA	NA
PB.3984.1	chr15	-	725	5	full-splice_match	COX5A	ENST00000322347.10	1268	5	56	487	-29	2	multi-exon	FALSE	canonical	1	1911907	junction_1	163340.11920682562	NA	0	NA	TRUE	NA	NA	NA	A	coding	150	453	99	551	30.0	30	False	AATAAA	-21
PB.4984.9	chr17	-	2576	14	novel_not_in_catalog	DHX58	novel	782	3	NA	NA	-2	-6	any annotated donor/acceptor	FALSE	canonical	1	71	junction_11	34391.85974933242	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	207	2225	30.0	-3	True	NA	NA
PB.8317.20	chr3	-	2670	5	incomplete-splice_match	TMEM39A	ENST00000319172.9	4369	9	66	15778	0	1364	3prime_fragment	FALSE	canonical	1	182389	junction_4	45848.64670031167	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	356	934	80.0	-2	True	NA	NA
PB.1678.1	chr10	+	1891	2	antisense	novelGene_TIAL1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	13249	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.916.5	chr1	+	6874	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	3	NA	TRUE	NA	NA	NA	C	coding	160	483	75	557	25.0	2	True	AATAAA	-21
PB.12258.2	chrX	+	2547	8	full-splice_match	SASH3	ENST00000356892.3	2626	8	77	2	77	-2	multi-exon	FALSE	canonical	1	354297	junction_1	42391.89466280129	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	38	1180	25.0	98	False	AATAAA	-15
PB.12258.3	chrX	+	2839	7	novel_in_catalog	SASH3	novel	352	2	NA	NA	-61	-3	intron_retention	FALSE	canonical	1	354297	junction_1	41774.143926663004	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	181	1473	30.0	2	True	AATAAA	-14
PB.12258.1	chrX	+	2579	7	novel_in_catalog	SASH3	novel	352	2	NA	NA	-99	-2	no_combination_of_known_junctions	FALSE	canonical	1	3488	junction_4	148083.58034091198	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	625	1212	25.0	-83	False	AATAAA	-15
PB.12258.6	chrX	+	4580	8	full-splice_match	SASH3	ENST00000356892.3	2626	8	-42	-1912	-37	1912	multi-exon	FALSE	canonical	1	354297	junction_1	42391.89466280129	NA	1	NA	TRUE	NA	NA	NA	C	coding	380	1143	157	1299	80.0	-21	True	AAGAAA	-23
PB.12258.7	chrX	+	3912	8	full-splice_match	SASH3	ENST00000356892.3	2626	8	-41	-1245	-36	1245	multi-exon	FALSE	canonical	1	354297	junction_1	42391.89466280129	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	156	1298	25.0	-20	True	NA	NA
PB.12258.4	chrX	+	4234	5	novel_in_catalog	SASH3	novel	352	2	NA	NA	-58	-3	intron_retention	FALSE	canonical	1	354297	junction_1	41572.5701514833	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	178	627	30.0	5	True	AATAAA	-14
PB.12258.5	chrX	+	3342	9	novel_in_catalog	SASH3	novel	352	2	NA	NA	-39	1911	intron_retention	FALSE	canonical	1	6015	junction_8	137809.49729132422	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	159	1301	75.0	-23	True	AAGAAA	-22
PB.12258.8	chrX	+	2446	7	novel_in_catalog	SASH3	novel	352	2	NA	NA	-28	-3	no_combination_of_known_junctions	FALSE	canonical	1	4056	junction_5	154419.47834065495	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	148	1080	30.0	-12	True	AATAAA	-14
PB.12258.9	chrX	+	2927	10	novel_in_catalog	SASH3	novel	352	2	NA	NA	-27	1913	no_combination_of_known_junctions	FALSE	canonical	1	4884	junction_8	170300.35788751967	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	147	1289	85.0	-11	True	AAGAAA	-24
PB.9726.9	chr6	-	1802	10	novel_not_in_catalog	SLC35B3	novel	2442	12	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	1	14950	junction_9	68430.12362825146	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	216	1325	40.0	-27	True	AATAAA	-20
PB.8438.2	chr3	+	809	3	full-splice_match	RNF7	ENST00000273480.3	2763	3	94	1860	1	0	multi-exon	FALSE	canonical	1	320481	junction_2	164430.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	45	386	25.0	-21	True	AATAAA	-17
PB.8438.3	chr3	+	1493	3	full-splice_match	RNF7	ENST00000273480.3	2763	3	110	1160	-5	6	multi-exon	FALSE	canonical	1	320481	junction_2	164430.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	29	370	35.0	-5	True	AATAAA	-21
PB.9726.8	chr6	-	1855	11	novel_not_in_catalog	SLC35B3	novel	2442	12	NA	NA	-6	2	any annotated donor/acceptor	FALSE	canonical	1	16387	junction_10	64588.06793239755	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	173	1378	40.0	-34	True	AATAAA	-20
PB.8438.4	chr3	+	1623	3	full-splice_match	RNF7	ENST00000273480.3	2763	3	110	1030	-5	136	multi-exon	FALSE	canonical	1	320481	junction_2	164430.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	113	342	29	370	55.0	-5	True	AATAAA	-21
PB.8438.5	chr3	+	2375	2	incomplete-splice_match	RNF7	ENST00000273480.3	2763	3	130	1860	15	0	intron_retention	FALSE	canonical	1	649341	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	15	True	AATAAA	-17
PB.11380.1	chr8	-	1336	11	full-splice_match	TSTA3	ENST00000425753.6	1362	11	26	0	-8	0	multi-exon	FALSE	canonical	1	585073	junction_10	169618.68130901738	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	79	1044	5.0	-2	True	AATAAA	-17
PB.6436.1	chr2	+	2615	14	novel_in_catalog	MTA3	novel	5832	18	NA	NA	-529	6	combination_of_known_junctions	FALSE	canonical	1	5711	junction_5	185615.98093432855	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	1454	2515	20.0	-529	False	AATAAA	-25
PB.9801.3	chr6	+	2966	9	novel_not_in_catalog	BTN2A1	novel	2845	7	NA	NA	6	2	any annotated donor/acceptor	FALSE	canonical	1	2427	junction_8	74919.38324083762	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	800	1876	30.0	0	True	NA	NA
PB.1006.3	chr1	+	1489	7	full-splice_match	RGS13	ENST00000391995.6	1505	7	13	3	13	-3	multi-exon	FALSE	canonical	1	17741	junction_2	24988.9148940752	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	276	755	35.0	0	True	AATAAA	-15
PB.9299.17	chr5	+	4580	16	novel_in_catalog	POLK	novel	5911	15	NA	NA	2	-21	intron_retention	FALSE	canonical	1	2427	junction_1	63104.58366200949	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	173	2785	30.0	2	True	AATAAA	-16
PB.4870.2	chr17	-	3365	2	full-splice_match	ABHD15	ENST00000307201.4	3592	2	101	126	101	-126	multi-exon	FALSE	canonical	1	108450	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	71	1477	90.0	-25	True	NA	NA
PB.4870.3	chr17	-	2539	2	full-splice_match	ABHD15	ENST00000307201.4	3592	2	306	747	306	-747	multi-exon	FALSE	canonical	1	108450	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	1	1272	20.0	9052	False	ATTAAA	-18
PB.4870.1	chr17	-	3485	2	full-splice_match	ABHD15	ENST00000307201.4	3592	2	104	3	104	-3	multi-exon	FALSE	canonical	1	108450	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	68	1474	15.0	-22	True	AATAAA	-14
PB.5988.5	chr19	+	3372	4	full-splice_match	MED29	ENST00000615911.4	3565	4	78	115	5	-115	multi-exon	FALSE	canonical	1	369834	junction_3	121879.9193550767	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	23	625	60.0	-11	True	NA	NA
PB.5988.4	chr19	+	3508	4	full-splice_match	MED29	ENST00000615911.4	3565	4	57	0	-8	0	multi-exon	FALSE	canonical	1	369834	junction_3	121879.9193550767	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	44	646	15.0	-32	True	ATTAAA	-14
PB.5988.1	chr19	+	2507	4	full-splice_match	MED29	ENST00000599213.6	2490	4	-18	1	-10	-1	multi-exon	FALSE	canonical	1	369834	junction_3	121879.9193550767	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	46	648	15.0	-34	True	NA	NA
PB.5988.3	chr19	+	3163	4	full-splice_match	MED29	ENST00000615911.4	3565	4	56	346	-9	239	multi-exon	FALSE	canonical	1	369834	junction_3	121879.9193550767	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	45	647	60.0	-33	True	NA	NA
PB.5988.2	chr19	+	2319	4	full-splice_match	MED29	ENST00000599213.6	2490	4	-18	189	-10	-189	multi-exon	FALSE	canonical	1	369834	junction_3	121879.9193550767	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	46	648	65.0	-34	True	NA	NA
PB.12262.1	chrX	-	3134	17	novel_not_in_catalog	AIFM1	novel	1925	7	NA	NA	-7	4696	any annotated donor/acceptor	FALSE	canonical	1	2264	junction_1	204664.15599730657	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	111	1952	10.0	7627	False	NA	NA
PB.12262.2	chrX	-	2224	16	full-splice_match	AIFM1	ENST00000287295.7	2260	16	40	-4	32	-1	multi-exon	FALSE	canonical	1	383560	junction_14	158233.6079506921	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	192	2033	20.0	-7	True	AATAAA	-18
PB.7023.10	chr2	-	4101	15	novel_in_catalog	AC068946.2	novel	5245	22	NA	NA	-6606	-9611	intron_retention	FALSE	canonical	1	20727	junction_14	138266.4938702373	NA	0	NA	TRUE	NA	NA	NA	B	coding	676	2031	414	2444	10.0	-1	True	AATAAA	-15
PB.4655.7	chr17	-	2780	11	full-splice_match	SMYD4	ENST00000305513.11	4384	11	-6	1610	-6	597	multi-exon	FALSE	canonical	1	65874	junction_9	14370.587976836578	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	175	2589	45.0	14	True	NA	NA
PB.4655.6	chr17	-	2914	11	full-splice_match	SMYD4	ENST00000305513.11	4384	11	17	1453	17	754	multi-exon	FALSE	canonical	1	65874	junction_9	14370.587976836578	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	152	2566	70.0	37	True	NA	NA
PB.4655.5	chr17	-	3095	11	full-splice_match	SMYD4	ENST00000305513.11	4384	11	-30	1319	-30	888	multi-exon	FALSE	canonical	1	65874	junction_9	14370.587976836578	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	199	2613	70.0	-10	True	NA	NA
PB.4655.4	chr17	-	3250	11	full-splice_match	SMYD4	ENST00000305513.11	4384	11	-21	1155	-21	1052	multi-exon	FALSE	canonical	1	65874	junction_9	14370.587976836578	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	190	2604	80.0	-1	True	NA	NA
PB.4655.3	chr17	-	4056	11	full-splice_match	SMYD4	ENST00000305513.11	4384	11	-15	343	-15	-343	multi-exon	FALSE	canonical	1	65874	junction_9	14370.587976836578	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	184	2598	65.0	5	True	ATTAAA	-3
PB.4655.2	chr17	-	4443	12	novel_not_in_catalog	SMYD4	novel	4384	11	NA	NA	0	-53	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	37001.10445123997	NA	20	2	TRUE	NA	NA	NA	C	coding	722	2169	169	2337	15.0	20	True	AATAAA	-31
PB.4655.1	chr17	-	4354	11	full-splice_match	SMYD4	ENST00000305513.11	4384	11	-21	51	-21	-51	multi-exon	FALSE	canonical	1	65874	junction_9	14370.587976836578	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	190	2604	10.0	-1	True	AATAAA	-33
PB.8598.8	chr3	+	3905	1	novel_in_catalog	IL1RAP	novel	4697	11	NA	NA	6	-1061	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-44	False	NA	NA
PB.4655.9	chr17	-	2718	11	novel_not_in_catalog	SMYD4	novel	4384	11	NA	NA	-19	325	any annotated donor/acceptor	FALSE	canonical	1	4453	junction_3	37389.22312057312	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	188	2227	95.0	1	True	NA	NA
PB.4655.8	chr17	-	2770	10	novel_not_in_catalog	SMYD4	novel	4384	11	NA	NA	22	325	any annotated donor/acceptor	FALSE	canonical	1	7187	junction_3	30677.65569576095	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	147	2054	95.0	42	True	NA	NA
PB.6384.2	chr2	+	2450	14	full-splice_match	GPN1	ENST00000264718.7	2496	14	48	-2	-8	2	multi-exon	FALSE	canonical	1	344445	junction_2	145669.67917008259	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	16	1140	35.0	-6	True	AATAAA	-19
PB.6384.3	chr2	+	1784	14	full-splice_match	GPN1	ENST00000610189.1	1778	14	-8	2	-8	0	multi-exon	FALSE	canonical	1	344445	junction_2	145669.67917008259	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	16	1140	25.0	-6	True	GATAAA	-15
PB.10023.21	chr6	+	2806	2	incomplete-splice_match	CD2AP	ENST00000359314.5	5412	18	134683	337	4600	-337	5prime_fragment	FALSE	canonical	1	324978	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-19
PB.6384.1	chr2	+	1684	12	novel_in_catalog	AC074091.1	novel	1741	18	NA	NA	45991	15670	no_combination_of_known_junctions	FALSE	canonical	1	23577	junction_2	213324.07403465695	NA	0	NA	TRUE	NA	NA	NA	A	coding	279	840	201	1040	25.0	-13	True	GATAAA	-15
PB.1176.6	chr1	+	2013	5	full-splice_match	ARF1	ENST00000482962.5	597	5	-104	-1312	-19	-3	multi-exon	FALSE	canonical	1	17358	junction_1	3168219.5624984214	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	273	818	10.0	-19	True	AATAAA	-14
PB.916.9	chr1	+	2797	9	novel_not_in_catalog	SFT2D2	novel	666	7	NA	NA	3	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	82219.31411541557	NA	3	NA	TRUE	NA	NA	NA	C	coding	160	483	70	552	30.0	7	True	AATAAA	-20
PB.1176.5	chr1	+	2073	5	full-splice_match	ARF1	ENST00000541182.1	2006	5	-67	0	-2	0	multi-exon	FALSE	canonical	1	11581	junction_1	3170508.967271107	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	330	875	10.0	-5123	False	AATAAA	-17
PB.7143.8	chr20	+	3030	24	full-splice_match	PTPRA	ENST00000399903.6	3337	24	-3	310	-3	-310	multi-exon	FALSE	canonical	1	77034	junction_6	255367.33671618238	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	397	2805	30.0	-25	True	ATTAAA	-20
PB.9970.1	chr6	+	2889	6	full-splice_match	ZFAND3	ENST00000287218.8	3366	6	474	3	31	-3	multi-exon	FALSE	canonical	1	324104	junction_1	191807.57463812528	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	58	657	15.0	39	False	ATTAAA	-12
PB.11327.8	chr8	-	2880	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	-67	3931	-67	1286	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	260	1327	30.0	-68	False	AATAAA	-14
PB.541.8	chr1	+	2306	15	novel_in_catalog	MTF2	novel	3845	13	NA	NA	0	152	intron_retention	FALSE	canonical	1	10333	junction_3	95464.44113289684	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	603	2030	30.0	0	True	ATTAAA	-15
PB.541.9	chr1	+	2063	13	novel_in_catalog	MTF2	novel	3845	13	NA	NA	0	152	intron_retention	FALSE	canonical	1	6075	junction_9	102631.61741755343	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	245	1261	30.0	0	True	ATTAAA	-15
PB.11327.9	chr8	-	2172	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	0	4572	0	645	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	193	1260	80.0	-1	True	NA	NA
PB.541.2	chr1	+	1966	14	full-splice_match	MTF2	ENST00000370303.4	1951	14	-49	34	-8	-15	multi-exon	FALSE	canonical	1	54032	junction_10	87701.96045652092	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	266	1876	80.0	-21	False	NA	NA
PB.541.3	chr1	+	1427	12	incomplete-splice_match	MTF2	ENST00000370298.8	4125	15	42	5359	-3	-18	3prime_fragment	FALSE	canonical	1	244090	junction_10	44887.86656429792	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1179	248	1426	85.0	-3	True	ATTAAA	-44
PB.6933.1	chr2	+	1195	5	full-splice_match	MAIP1	ENST00000392290.5	1386	5	174	17	-44	0	multi-exon	FALSE	canonical	1	308426	junction_1	45190.31952476105	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	23	898	55.0	-16	True	AATAAA	-11
PB.2371.2	chr11	-	6322	21	full-splice_match	PRDM10	ENST00000360871.7	6301	21	-18	-3	-18	3	multi-exon	FALSE	canonical	1	32002	junction_20	13137.716719049775	NA	1	NA	TRUE	NA	NA	NA	C	coding	1156	3471	251	3721	25.0	-19	True	AATAAA	-38
PB.2371.3	chr11	-	6208	21	novel_not_in_catalog	PRDM10	novel	6322	22	NA	NA	-14	-22	any annotated donor/acceptor	FALSE	canonical	1	238	junction_20	17464.746313359377	NA	2	NA	TRUE	NA	NA	NA	C	coding	1156	3471	164	3634	35.0	-15	True	AATAAA	-11
PB.541.4	chr1	+	4081	15	full-splice_match	MTF2	ENST00000370298.8	4125	15	42	2	-3	0	multi-exon	FALSE	canonical	1	244090	junction_10	51950.578808623686	NA	2	NA	TRUE	NA	NA	NA	C	coding	593	1782	248	2029	20.0	-3	True	ATTAAA	-39
PB.2371.1	chr11	-	6271	21	novel_in_catalog	PRDM10	novel	6322	22	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	1	12738	junction_3	16402.910410960612	NA	1	NA	TRUE	NA	NA	NA	C	coding	1143	3432	238	3669	20.0	-6	True	AATAAA	-39
PB.2585.1	chr12	-	1663	12	full-splice_match	PRKAG1	ENST00000548065.6	1699	12	44	-8	-2	1	multi-exon	FALSE	canonical	1	353404	junction_11	133613.29736721134	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	42	1037	20.0	-6	True	ATTAAA	-22
PB.2585.3	chr12	-	2785	1	novel_in_catalog	PRKAG1	novel	1531	11	NA	NA	0	-3351	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	134	405	600	1004	80.0	5	True	NA	NA
PB.2585.2	chr12	-	1733	12	full-splice_match	PRKAG1	ENST00000546531.5	1679	12	-15	-39	5	1	multi-exon	FALSE	canonical	1	15771	junction_9	232668.602330503	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	364	1107	20.0	993	False	ATTAAA	-22
PB.8002.3	chr3	+	2503	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	-1	4128	-1	487	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	101	1306	30.0	-5	True	NA	NA
PB.7143.9	chr20	+	2543	19	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	-2	-303	no_combination_of_known_junctions	FALSE	canonical	1	19917	junction_11	273786.86253736226	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	320	2311	40.0	-24	True	ATTAAA	-27
PB.8217.1	chr3	-	2540	12	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	0	3192	any annotated donor/acceptor	TRUE	canonical	1	1147	junction_1	93979.29073212032	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	25	1362	25.0	-9	True	AATAAA	-22
PB.8608.1	chr3	-	2733	4	full-splice_match	XXYLT1	ENST00000310380.10	2727	4	-5	-1	-5	1	multi-exon	FALSE	canonical	1	145204	junction_3	23951.044458784396	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	154	1296	10.0	-14	False	AATAAA	-20
PB.8608.3	chr3	-	2259	4	full-splice_match	XXYLT1	ENST00000310380.10	2727	4	-6	474	-6	-152	multi-exon	FALSE	canonical	1	145204	junction_3	23951.044458784396	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	155	1297	35.0	-15	False	NA	NA
PB.8608.2	chr3	-	2397	4	full-splice_match	XXYLT1	ENST00000310380.10	2727	4	8	322	8	0	multi-exon	FALSE	canonical	1	145204	junction_3	23951.044458784396	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	141	1283	90.0	-1	True	NA	NA
PB.5403.3	chr18	-	2463	12	full-splice_match	CEP76	ENST00000262127.6	2939	12	11	465	-7	0	multi-exon	FALSE	canonical	1	75440	junction_7	12341.72772975372	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	216	2195	45.0	12	False	AATAAA	-20
PB.5403.2	chr18	-	2684	12	full-splice_match	CEP76	ENST00000262127.6	2939	12	5	250	5	215	multi-exon	FALSE	canonical	1	75440	junction_7	12341.72772975372	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	222	2201	10.0	6	False	AATAAA	-16
PB.5403.1	chr18	-	3876	12	full-splice_match	CEP76	ENST00000262127.6	2939	12	28	-965	10	965	multi-exon	FALSE	canonical	1	75440	junction_7	12341.72772975372	NA	2	NA	TRUE	NA	NA	NA	C	coding	659	1980	199	2178	100.0	29	False	NA	NA
PB.8217.3	chr3	-	3073	13	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	3	-2	any annotated donor/acceptor	FALSE	canonical	1	8592	junction_3	97615.08930441913	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	19	1158	20.0	-3	True	AATAAA	-20
PB.4649.1	chr17	-	3269	14	novel_in_catalog	SLC43A2	novel	8136	14	NA	NA	-85	-32	intron_retention	FALSE	canonical	1	23499	junction_13	78168.34961760948	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	360	2069	20.0	-45	True	AATAAA	-18
PB.4649.2	chr17	-	2995	14	full-splice_match	SLC43A2	ENST00000301335.9	8136	14	3	5138	3	-33	multi-exon	FALSE	canonical	1	76826	junction_13	66463.37445612188	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	87	1796	15.0	-14	True	AATAAA	-17
PB.4649.3	chr17	-	2503	10	novel_not_in_catalog	SLC43A2	novel	8136	14	NA	NA	-9799	-32	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	95022.04517523263	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	104	1303	20.0	-199	False	AATAAA	-18
PB.4649.4	chr17	-	3300	14	novel_in_catalog	SLC43A2	novel	8136	14	NA	NA	-84	-33	intron_retention	FALSE	canonical	1	8014	junction_13	81716.19139378269	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	392	2101	15.0	-44	True	AATAAA	-17
PB.11233.11	chr8	-	3040	5	full-splice_match	TRIQK	ENST00000518748.5	3563	5	54	469	-3	-469	multi-exon	FALSE	canonical	1	61451	junction_3	65271.55781569412	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.11233.12	chr8	-	1867	5	full-splice_match	TRIQK	ENST00000521988.5	3672	5	0	1805	0	0	multi-exon	FALSE	canonical	1	109797	junction_3	47382.331476907086	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	AATAAA	-27
PB.11233.13	chr8	-	2013	6	novel_in_catalog	TRIQK	novel	3672	5	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	22472	junction_3	88538.43685767216	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	9	True	AATAAA	-26
PB.5582.1	chr19	-	2384	9	full-splice_match	BTBD2	ENST00000255608.8	2649	9	255	10	73	-10	multi-exon	TRUE	canonical	1	615788	junction_8	209755.48544611264	NA	1	NA	TRUE	NA	NA	NA	A	coding	377	1134	211	1344	15.0	244	False	AATAAA	-18
PB.998.20	chr1	-	3835	26	incomplete-splice_match	TPR	ENST00000367478.8	9708	51	64	32254	64	-5719	3prime_fragment	FALSE	canonical	1	379424	junction_25	73074.5116192616	NA	0	NA	TRUE	NA	NA	NA	B	coding	1200	3600	234	3833	25.0	-9	True	NA	NA
PB.8854.10	chr4	-	3861	12	novel_in_catalog	LIN54	novel	810	4	NA	NA	36	-7	no_combination_of_known_junctions	FALSE	canonical	1	19	junction_6	50319.89805860202	NA	4	NA	TRUE	NA	NA	NA	C	coding	462	1389	93	1481	35.0	37	True	AATAAA	-17
PB.8854.11	chr4	-	4464	13	full-splice_match	LIN54	ENST00000505397.1	2742	13	6	-1728	6	-334	multi-exon	FALSE	canonical	1	34737	junction_12	35647.612521738396	NA	3	NA	TRUE	NA	NA	NA	C	coding	749	2250	162	2411	25.0	20	False	NA	NA
PB.8217.6	chr3	-	2494	12	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	2840	junction_10	135919.45883792132	NA	1	NA	TRUE	NA	NA	NA	C	coding	380	1143	329	1471	20.0	-5	True	AATAAA	-20
PB.998.26	chr1	-	2366	18	novel_in_catalog	TPR	novel	9708	51	NA	NA	-27	-1664	combination_of_known_junctions	FALSE	canonical	1	28601	junction_17	142010.77128958554	NA	0	NA	TRUE	NA	NA	NA	B	coding	682	2046	321	2366	80.0	13	True	NA	NA
PB.2124.6	chr11	+	4393	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	1	22330	junction_23	161216.03255753347	NA	3	NA	TRUE	NA	NA	NA	C	coding	883	2652	268	2919	20.0	-34	False	AATAAA	-13
PB.2124.7	chr11	+	5142	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	97819	junction_1	167034.64312287784	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	394	2928	20.0	-33	False	AATAAA	-21
PB.2124.4	chr11	+	4872	23	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	35691	junction_2	160639.92972332396	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2349	310	2658	20.0	-36	False	AATAAA	-21
PB.2124.5	chr11	+	4366	24	full-splice_match	PPP6R3	ENST00000393800.6	5093	24	-15	742	-15	0	multi-exon	FALSE	canonical	1	173470	junction_1	130724.7712184398	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	270	2891	25.0	-36	False	AATAAA	-14
PB.2124.2	chr11	+	6382	6	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-30	2315	intron_retention	FALSE	canonical	1	11980	junction_5	159276.80145281673	NA	6	NA	TRUE	NA	NA	NA	C	coding	198	597	285	881	90.0	-51	False	NA	NA
PB.2124.3	chr11	+	5233	25	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	97819	junction_1	155516.09974888185	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	398	3019	20.0	-37	False	AATAAA	-21
PB.2124.1	chr11	+	3715	25	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-31	-84	combination_of_known_junctions	FALSE	canonical	1	97819	junction_1	155516.09974888185	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	413	3034	25.0	-52	False	AGTAAA	-42
PB.9231.6	chr5	-	2596	17	novel_in_catalog	SLC38A9	novel	3509	8	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	26897	junction_14	37821.667707593144	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	276	1961	10.0	0	True	AATAAA	-15
PB.5035.10	chr17	+	1968	3	full-splice_match	TMUB2	ENST00000589785.1	1918	3	-33	-17	-5	-1	multi-exon	FALSE	canonical	1	20961	junction_1	173712.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	198	1103	20.0	-21	True	AATAAA	-20
PB.9231.5	chr5	-	2854	18	novel_in_catalog	SLC38A9	novel	3509	8	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	1381	junction_16	47629.778943655125	NA	3	1	TRUE	NA	NA	NA	C	coding	561	1686	534	2219	10.0	-2	True	AATAAA	-15
PB.9231.2	chr5	-	2433	16	novel_in_catalog	SLC38A9	novel	3509	8	NA	NA	-2	-1	no_combination_of_known_junctions	TRUE	canonical	1	10059	junction_6	45561.9623896952	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	297	1787	20.0	6	True	AATAAA	-26
PB.9231.3	chr5	-	2326	15	novel_in_catalog	SLC38A9	novel	3509	8	NA	NA	6	-1	no_combination_of_known_junctions	FALSE	canonical	1	10059	junction_6	38976.28784228028	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	190	1680	20.0	0	True	AATAAA	-26
PB.2124.8	chr11	+	5051	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	37865	junction_15	155055.68448358472	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	267	2837	20.0	-33	False	AATAAA	-21
PB.2124.9	chr11	+	5014	23	full-splice_match	PPP6R3	ENST00000524845.5	2771	23	-29	-2214	-11	0	multi-exon	FALSE	canonical	1	101206	junction_14	143526.04227289435	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	266	2800	20.0	-32	False	AATAAA	-21
PB.10696.2	chr7	+	1546	10	full-splice_match	ARPC1A	ENST00000262942.9	1565	10	24	-5	7	0	multi-exon	FALSE	canonical	1	170037	junction_5	289822.1449947502	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	101	1213	0.0	-29	False	AATAAA	-15
PB.1067.5	chr1	-	1987	1	incomplete-splice_match	NUCKS1	ENST00000367142.4	6496	7	35096	375	4546	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	5365	False	TATAAA	-17
PB.1067.4	chr1	-	6034	7	full-splice_match	NUCKS1	ENST00000367142.4	6496	7	87	375	87	-375	multi-exon	FALSE	canonical	1	1131827	junction_1	952223.6762744699	NA	4	1	TRUE	NA	NA	NA	C	coding	243	732	217	948	15.0	-8	True	TATAAA	-17
PB.1067.7	chr1	-	2628	1	incomplete-splice_match	NUCKS1	ENST00000367142.4	6496	7	34280	550	3730	-550	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	4549	False	NA	NA
PB.12348.4	chrX	+	2267	9	novel_in_catalog	TAZ	novel	1322	5	NA	NA	-2	1	intron_retention	FALSE	canonical	1	103193	junction_5	148947.0284872696	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	306	860	20.0	-7	True	CATAAA	-21
PB.4358.3	chr16	+	1401	9	full-splice_match	ALDOA	ENST00000563060.6	1550	9	148	1	-12	-1	multi-exon	FALSE	canonical	1	3506085	junction_1	5610545.779171697	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	106	1200	5.0	-5808	False	AATAAA	-17
PB.4358.2	chr16	+	1632	11	novel_in_catalog	AC093512.2	novel	2390	14	NA	NA	9594	-1	intron_retention	FALSE	canonical	1	6551	junction_2	8582109.401733212	NA	0	NA	TRUE	NA	NA	NA	B	coding	418	1257	176	1432	5.0	-15	True	AATAAA	-16
PB.4358.1	chr16	+	1713	10	incomplete-splice_match	AC093512.2	ENST00000566897.6	2448	12	10808	0	9360	0	5prime_fragment	FALSE	canonical	1	2399568	junction_1	7004089.5497098155	NA	0	NA	TRUE	NA	NA	NA	B	coding	364	1095	418	1512	5.0	0	True	AATAAA	-17
PB.5783.3	chr19	-	2350	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	-8	4	intron_retention	FALSE	canonical	1	77837	junction_5	662149.1768890447	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	1681	2229	15.0	-9	True	AATAAA	-20
PB.3429.10	chr14	-	3044	2	novel_not_in_catalog	PYGL	novel	2711	20	NA	NA	1	-17571	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	coding	194	585	80	664	40.0	0	True	NA	NA
PB.415.8	chr1	+	4128	4	full-splice_match	SCP2	ENST00000478274.6	969	4	-61	-3098	-23	3	multi-exon	FALSE	canonical	1	1228360	junction_2	111427.30207728365	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	117	482	10.0	1	True	ATTAAA	-19
PB.4358.4	chr16	+	1426	9	full-splice_match	ALDOA	ENST00000643777.1	1485	9	58	1	28	-1	multi-exon	FALSE	canonical	1	12887843	junction_1	3072073.7300309436	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	131	1225	5.0	-2	True	AATAAA	-17
PB.7811.4	chr22	+	3670	16	full-splice_match	L3MBTL2	ENST00000466589.5	3055	16	3	-618	0	1	multi-exon	FALSE	canonical	1	181400	junction_5	53198.09624020602	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	52	1905	15.0	0	True	ATTAAA	-18
PB.7658.6	chr22	+	4684	27	incomplete-splice_match	CABIN1	ENST00000398319.6	7480	37	-8	64889	-6	-5867	3prime_fragment	FALSE	canonical	1	85480	junction_1	43354.31008611369	NA	0	NA	TRUE	NA	NA	NA	C	coding	1430	4290	394	4683	45.0	-4	True	NA	NA
PB.7811.6	chr22	+	3073	16	novel_not_in_catalog	L3MBTL2	novel	3296	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	757	junction_14	104932.83619183378	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	52	1893	15.0	0	True	ATTAAA	-16
PB.10696.1	chr7	+	1565	10	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	-4	-21902	any annotated donor/acceptor	TRUE	canonical	1	7161	junction_9	347518.9626952254	NA	0	NA	TRUE	NA	NA	NA	B	coding	363	1092	141	1232	0.0	-16	True	AATAAA	-15
PB.7811.1	chr22	+	1923	15	incomplete-splice_match	L3MBTL2	ENST00000216237.9	3296	17	91	3434	-6	27	3prime_fragment	TRUE	canonical	1	181400	junction_5	54002.080867550925	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1854	68	1921	70.0	-16	True	NA	NA
PB.6155.5	chr19	-	3129	2	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	3	-10859	intron_retention	FALSE	canonical	1	36693	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	522	1569	151	1719	40.0	-15	True	AATAAA	-15
PB.7811.3	chr22	+	2573	17	full-splice_match	L3MBTL2	ENST00000216237.9	3296	17	103	620	-1	-3	multi-exon	FALSE	canonical	1	181400	junction_5	53542.68813351175	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	56	2173	45.0	-4	True	AATACA	-23
PB.10696.6	chr7	+	1627	10	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	20	-21903	any annotated donor/acceptor	FALSE	canonical	1	2409	junction_5	324955.3817758089	NA	0	NA	TRUE	NA	NA	NA	B	coding	392	1179	117	1295	0.0	8	True	AATAAA	-14
PB.6497.12	chr2	+	3194	18	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	1	-413	intron_retention	FALSE	canonical	1	6325	junction_1	67113.10437042303	NA	2	NA	TRUE	NA	NA	NA	C	coding	958	2874	320	3193	55.0	-26	True	NA	NA
PB.10696.7	chr7	+	1474	10	full-splice_match	ARPC1B	ENST00000646101.2	1511	10	0	37	0	3	multi-exon	FALSE	canonical	1	2237353	junction_1	466487.11309150275	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	66	1184	100.0	0	True	AATAAA	-13
PB.8829.15	chr4	-	2096	21	novel_in_catalog	SDAD1	novel	650	4	NA	NA	1	4053	combination_of_known_junctions	FALSE	canonical	1	14828	junction_20	61574.90369103308	NA	3	NA	TRUE	NA	NA	NA	C	coding	615	1845	250	2094	75.0	-21	True	AAGAAA	-30
PB.4136.20	chr16	+	2692	16	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	1	5	intron_retention	FALSE	canonical	1	55067	junction_1	244386.02207073045	NA	4	NA	TRUE	NA	NA	NA	C	coding	397	1194	975	2168	25.0	-7	True	ATTAAA	-24
PB.4136.21	chr16	+	2647	17	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	0	-4	intron_retention	FALSE	canonical	1	586393	junction_7	150455.12778436425	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	890	2083	15.0	0	True	NA	NA
PB.4136.22	chr16	+	2619	17	novel_in_catalog	RHOT2	novel	2539	19	NA	NA	2	0	intron_retention	FALSE	canonical	1	586393	junction_7	150177.59611243408	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	907	2100	15.0	-11	True	ATTAAA	-19
PB.9442.2	chr5	+	2325	6	full-splice_match	CCNI2	ENST00000378731.5	2355	6	30	0	30	0	multi-exon	FALSE	canonical	1	12690	junction_4	14967.662390634016	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	22	1131	20.0	0	True	NA	NA
PB.4803.7	chr17	-	4199	20	novel_in_catalog	SREBF1	novel	1230	5	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	27438	junction_13	246554.72961446748	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	1657	3657	10.0	-1	True	ATTAAA	-15
PB.10790.1	chr7	-	3118	1	antisense	novelGene_ZNF277_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7658.5	chr22	+	7404	37	novel_not_in_catalog	CABIN1	novel	1321	9	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	32435	junction_35	101276.10950419049	NA	0	NA	TRUE	NA	NA	NA	C	coding	2191	6576	398	6973	5.0	-8	True	AATAAA	-12
PB.8002.7	chr3	+	1902	6	novel_in_catalog	CRTAP	novel	6630	7	NA	NA	35	6	no_combination_of_known_junctions	FALSE	canonical	1	7927	junction_5	573474.7063349874	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	65	1186	35.0	0	True	AAGAAA	-18
PB.10582.2	chr7	+	3617	4	incomplete-splice_match	STAG3L4	ENST00000416602.6	2143	5	40	8873	2	2938	3prime_fragment	FALSE	canonical	1	124119	junction_2	84251.3764569392	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	269	781	75.0	2	True	NA	NA
PB.10582.1	chr7	+	1878	5	full-splice_match	STAG3L4	ENST00000416602.6	2143	5	35	230	-3	-230	multi-exon	FALSE	canonical	1	124119	junction_2	73877.7519588949	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	274	693	70.0	-3	True	NA	NA
PB.9442.1	chr5	+	2423	6	full-splice_match	CCNI2	ENST00000614847.1	2642	6	-20	239	-20	0	multi-exon	FALSE	canonical	1	15484	junction_1	13474.593871430783	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	72	1229	20.0	-1	True	NA	NA
PB.7997.1	chr3	+	1144	5	full-splice_match	CMTM7	ENST00000334983.9	2038	5	209	685	-9	8	multi-exon	FALSE	canonical	1	223963	junction_1	75588.82072560399	NA	0	NA	TRUE	NA	NA	NA	A	coding	175	528	28	555	35.0	1	True	AATAAA	-21
PB.11774.2	chr9	-	4238	2	novel_not_in_catalog	ZBTB6	novel	4106	2	NA	NA	264	-1	any annotated donor/acceptor	FALSE	canonical	1	5193	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	424	1275	223	1497	25.0	245	False	AATAAA	-17
PB.10205.6	chr6	-	2596	1	novel_in_catalog	ECHDC1	novel	2341	6	NA	NA	854	-1185	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-3662	False	NA	NA
PB.10205.7	chr6	-	2609	1	novel_in_catalog	ECHDC1	novel	2341	6	NA	NA	-6	-13876	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-7	True	NA	NA
PB.10205.4	chr6	-	2072	6	novel_not_in_catalog	ECHDC1	novel	2341	6	NA	NA	1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	326247.1916215678	NA	4	1	TRUE	NA	NA	NA	C	coding	137	414	25	438	40.0	1	True	AATAAA	-20
PB.10696.9	chr7	+	1545	11	full-splice_match	ARPC1B	ENST00000645391.1	1669	11	21	103	-11	-14	multi-exon	FALSE	canonical	1	15188	junction_2	1318208.903809123	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	218	1336	70.0	0	True	NA	NA
PB.10205.2	chr6	-	2041	5	full-splice_match	ECHDC1	ENST00000368291.6	1354	5	233	-920	-7	-2	multi-exon	FALSE	canonical	1	191876	junction_4	268276.37027175445	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	34	471	40.0	-8	True	AATAAA	-20
PB.10205.3	chr6	-	2135	7	novel_not_in_catalog	ECHDC1	novel	2341	6	NA	NA	-6	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	327925.03614211216	NA	3	1	TRUE	NA	NA	NA	C	coding	139	420	71	490	40.0	-7	True	AATAAA	-20
PB.10205.1	chr6	-	2094	6	full-splice_match	ECHDC1	ENST00000454859.7	2341	6	243	4	-7	-2	multi-exon	FALSE	canonical	1	191876	junction_5	205194.32375151123	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	34	939	40.0	-8	True	AATAAA	-20
PB.8002.6	chr3	+	3804	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	83	2743	8	1872	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	17	1222	10.0	0	True	AATAAA	-14
PB.6728.1	chr2	-	3310	13	incomplete-splice_match	MAP3K2	ENST00000344908.9	2135	16	7278	-1457	7278	1457	5prime_fragment	FALSE	canonical	1	136499	junction_6	24539.141753533273	NA	2	NA	TRUE	NA	NA	NA	B	coding	540	1623	56	1678	85.0	-2822	False	NA	NA
PB.1077.2	chr1	+	2163	3	full-splice_match	DYRK3	ENST00000367109.6	2163	3	-2	2	-2	-2	multi-exon	FALSE	canonical	1	50839	junction_1	12570.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	171	1937	25.0	-2	True	ATTAAA	-17
PB.1077.3	chr1	+	2255	4	full-splice_match	DYRK3	ENST00000367108.7	2218	4	-43	6	0	-2	multi-exon	FALSE	canonical	1	11884	junction_1	29656.54269578075	NA	4	NA	TRUE	NA	NA	NA	C	coding	568	1707	323	2029	25.0	0	True	ATTAAA	-17
PB.1077.1	chr1	+	3395	3	full-splice_match	DYRK3	ENST00000367109.6	2163	3	-22	-1210	-22	1206	multi-exon	FALSE	canonical	1	50839	junction_1	12570.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	191	1957	65.0	-8540	False	NA	NA
PB.1077.6	chr1	+	6934	3	full-splice_match	DYRK3	ENST00000367109.6	2163	3	17	-4788	17	4784	multi-exon	FALSE	canonical	1	50839	junction_1	12570.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	588	1767	152	1918	25.0	17	True	AATAAA	-27
PB.1077.7	chr1	+	3938	4	novel_not_in_catalog	DYRK3	novel	2163	3	NA	NA	15	4784	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	31604.560504247907	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	154	1920	25.0	15	True	AATAAA	-27
PB.1077.4	chr1	+	2049	2	novel_in_catalog	DYRK3	novel	2163	3	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	1650	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	246	1823	25.0	0	True	ATTAAA	-17
PB.1077.5	chr1	+	3093	3	full-splice_match	DYRK3	ENST00000367109.6	2163	3	11	-941	11	937	multi-exon	FALSE	canonical	1	50839	junction_1	12570.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	158	1924	30.0	11	True	AATAAA	-11
PB.2738.3	chr12	+	2308	12	full-splice_match	IRAK3	ENST00000261233.8	8663	12	370	5985	-8	264	multi-exon	FALSE	canonical	1	26080	junction_1	20619.828164188497	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	52	1842	35.0	-42	True	AATAGA	-10
PB.2738.2	chr12	+	5765	12	full-splice_match	IRAK3	ENST00000261233.8	8663	12	266	2632	-50	-2632	multi-exon	FALSE	canonical	1	26080	junction_1	20619.828164188497	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	156	1946	55.0	-146	True	NA	NA
PB.2738.1	chr12	+	1971	12	full-splice_match	IRAK3	ENST00000261233.8	8663	12	229	6463	-87	-214	multi-exon	FALSE	canonical	1	26080	junction_1	20619.828164188497	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1779	193	1971	60.0	-7950	False	NA	NA
PB.5546.5	chr19	-	1324	9	full-splice_match	RNF126	ENST00000292363.9	1694	9	85	285	2	-281	multi-exon	FALSE	canonical	1	205505	junction_5	169672.13640264422	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	72	1007	15.0	-9	True	AATAAA	-16
PB.11778.5	chr9	-	2639	19	novel_not_in_catalog	STRBP	novel	663	5	NA	NA	-1	-203	any annotated donor/acceptor	FALSE	canonical	1	9837	junction_18	160832.90994056725	NA	0	NA	TRUE	NA	NA	NA	B	coding	672	2019	447	2465	80.0	8	True	NA	NA
PB.11617.9	chr9	-	3698	19	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	-241	-435	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	98622.7471299592	NA	3	1	TRUE	NA	NA	NA	B	coding	467	1404	2215	3618	75.0	0	True	AATAGA	-15
PB.1394.1	chr10	-	2554	6	incomplete-splice_match	ZFAND4	ENST00000344646.9	3241	10	-453	23053	-21	1058	3prime_fragment	FALSE	canonical	1	15506	junction_5	22045.980772920942	NA	1	NA	TRUE	NA	NA	NA	B	coding	250	753	670	1422	25.0	-52	False	NA	NA
PB.1394.2	chr10	-	2420	1	novel_in_catalog	ZFAND4	novel	3821	11	NA	NA	69	-20119	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	86	False	NA	NA
PB.8002.9	chr3	+	2281	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	83	4266	8	349	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	17	1222	20.0	0	True	NA	NA
PB.11380.3	chr8	-	1947	7	novel_in_catalog	TSTA3	novel	762	2	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	585073	junction_6	196022.4574829799	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	57	593	5.0	20	True	AATAAA	-16
PB.1616.16	chr10	+	2480	13	full-splice_match	NOLC1	ENST00000370007.5	3727	13	-24	1271	-4	0	multi-exon	FALSE	canonical	1	166825	junction_6	384156.2266167369	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	21	2150	20.0	2	True	ATTAAA	-14
PB.1616.15	chr10	+	3959	12	novel_in_catalog	NOLC1	novel	3932	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	166825	junction_6	395801.9209524543	NA	2	1	TRUE	NA	NA	NA	C	coding	356	1071	21	1091	15.0	2	True	NA	NA
PB.1616.14	chr10	+	3687	13	novel_not_in_catalog	NOLC1	novel	3932	13	NA	NA	-6	1	any annotated donor/acceptor	FALSE	canonical	1	497	junction_1	413798.48667373374	NA	3	1	TRUE	NA	NA	NA	C	coding	688	2067	23	2089	15.0	0	True	NA	NA
PB.1616.13	chr10	+	3799	14	novel_not_in_catalog	NOLC1	novel	3932	13	NA	NA	-6	2	any annotated donor/acceptor	FALSE	canonical	1	14118	junction_11	456078.9881249745	NA	2	1	TRUE	NA	NA	NA	C	coding	725	2178	23	2200	15.0	0	True	NA	NA
PB.1616.12	chr10	+	3931	12	novel_in_catalog	NOLC1	novel	3932	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	515531	junction_2	286935.64948493044	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	23	1063	15.0	0	True	NA	NA
PB.1616.11	chr10	+	1861	11	incomplete-splice_match	NOLC1	ENST00000488254.6	2441	13	-16	951	-7	-950	3prime_fragment	FALSE	canonical	1	673850	junction_2	220760.92668803508	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1836	24	1859	60.0	-1	True	GATAAA	-25
PB.1616.10	chr10	+	3758	13	novel_in_catalog	NOLC1	novel	3932	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	166825	junction_6	367458.78880286997	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	25	2157	15.0	-2	True	NA	NA
PB.6582.1	chr2	+	2438	1	novel_in_catalog	MRPL19	novel	693	6	NA	NA	26434	-6988	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	1150	1449	100.0	NA	False	NA	NA
PB.3308.11	chr14	-	2121	3	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-715	929	any annotated donor/acceptor	FALSE	canonical	1	5275	junction_1	3506.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	1	True	AATAAA	-12
PB.3308.10	chr14	-	2260	4	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	929	any annotated donor/acceptor	FALSE	canonical	1	12288	junction_3	3354.344976626916	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-12
PB.3308.13	chr14	-	1695	3	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	-6	intron_retention	FALSE	canonical	1	12288	junction_2	3750.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-24
PB.3308.12	chr14	-	1864	2	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	-6	intron_retention	FALSE	canonical	1	12288	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-24
PB.3308.15	chr14	-	3200	1	novel_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-23
PB.3308.14	chr14	-	1324	4	novel_not_in_catalog	AC244502.1	novel	1951	3	NA	NA	-717	-7	any annotated donor/acceptor	FALSE	canonical	1	12288	junction_3	3354.344976626916	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-23
PB.3268.2	chr13	+	5575	26	incomplete-splice_match	MCF2L	ENST00000375604.6	6445	30	42891	1187	-57	0	intron_retention	TRUE	canonical	1	94252	junction_10	30179.381897023675	NA	0	NA	TRUE	NA	NA	NA	B	coding	1069	3210	503	3712	15.0	0	True	AATAAA	-17
PB.3268.3	chr13	+	5401	27	incomplete-splice_match	MCF2L	ENST00000375604.6	6445	30	42945	1187	-3	0	5prime_fragment	FALSE	canonical	1	94252	junction_10	31869.942107979678	NA	2	NA	TRUE	NA	NA	NA	B	coding	1087	3264	449	3712	15.0	13	True	AATAAA	-17
PB.3268.1	chr13	+	5021	28	novel_in_catalog	MCF2L	novel	3648	30	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	21256	junction_1	40321.94720789769	NA	1	NA	TRUE	NA	NA	NA	B	coding	1087	3264	69	3332	15.0	11	True	AATAAA	-17
PB.3463.1	chr14	-	3782	8	full-splice_match	ARMH4	ENST00000267485.7	6495	8	0	2713	0	-2713	multi-exon	FALSE	canonical	1	19670	junction_7	8961.328869204655	NA	1	NA	TRUE	NA	NA	NA	C	coding	774	2325	196	2520	15.0	-17	True	AATAAA	-24
PB.5621.1	chr19	+	2726	5	full-splice_match	EBI3	ENST00000221847.5	1186	5	-1570	30	-1570	-30	multi-exon	FALSE	canonical	1	302801	junction_1	20143.583623265746	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	1624	2313	70.0	-6767	False	NA	NA
PB.5977.19	chr19	+	2492	11	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	16	386	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	717421.2559978691	NA	4	1	TRUE	NA	NA	NA	C	coding	368	1107	288	1394	20.0	-1	True	AATAAA	-23
PB.5621.2	chr19	+	2622	6	novel_not_in_catalog	EBI3	novel	1186	5	NA	NA	-1524	10	any annotated donor/acceptor	FALSE	canonical	1	4485	junction_1	128932.15111584851	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	1480	2169	15.0	-30	True	NA	NA
PB.5621.4	chr19	+	1618	6	novel_not_in_catalog	EBI3	novel	1186	5	NA	NA	25	6561	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	130708.789230717	NA	4	NA	TRUE	NA	NA	NA	C	coding	229	690	29	718	95.0	-12	True	NA	NA
PB.5977.13	chr19	+	3303	20	novel_in_catalog	ACTN4	novel	1729	12	NA	NA	5	-54	no_combination_of_known_junctions	FALSE	canonical	1	104	junction_14	971765.4942912281	NA	4	1	TRUE	NA	NA	NA	C	coding	850	2553	93	2645	90.0	5	True	NA	NA
PB.5977.12	chr19	+	2998	19	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	4	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	987819.6592693739	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	94	2340	90.0	4	True	NA	NA
PB.5977.11	chr19	+	2089	11	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	1	-54	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	1109058.3512250606	NA	3	1	TRUE	NA	NA	NA	C	coding	444	1335	97	1431	90.0	1	True	NA	NA
PB.5977.10	chr19	+	2768	18	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	1	378	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	913299.7947484478	NA	1	NA	TRUE	NA	NA	NA	C	coding	744	2235	97	2331	35.0	1	True	AATAAA	-15
PB.5977.17	chr19	+	2576	17	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	9	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	922187.9450603382	NA	3	NA	TRUE	NA	NA	NA	C	coding	769	2310	68	2377	90.0	-8	False	NA	NA
PB.5977.16	chr19	+	1714	8	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	-10	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	817253.14669199	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	325	1056	90.0	11	True	NA	NA
PB.5977.15	chr19	+	3195	21	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	10	-54	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	950730.3632108778	NA	3	1	TRUE	NA	NA	NA	C	coding	894	2685	88	2772	90.0	10	True	NA	NA
PB.5977.14	chr19	+	1982	16	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	5	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	941672.3974242988	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1890	93	1982	90.0	5	True	NA	NA
PB.7590.8	chr22	+	2065	4	novel_not_in_catalog	CECR7	novel	2726	4	NA	NA	1	3111	any annotated donor/acceptor	FALSE	canonical	1	1087	junction_3	23302.493948550276	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7590.9	chr22	+	3445	3	incomplete-splice_match	CECR7	ENST00000414401.5	546	4	30	6021	3	3111	3prime_fragment	FALSE	canonical	1	45324	junction_1	4560.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.1051.28	chr1	+	2072	14	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	-17	-279	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_2	85451.04663230412	NA	2	NA	TRUE	NA	NA	NA	C	coding	422	1266	806	2071	70.0	14	True	AAAACA	-24
PB.7590.4	chr22	+	3219	4	novel_not_in_catalog	CECR7	novel	2726	4	NA	NA	11	-3	any annotated donor/acceptor	FALSE	canonical	1	946	junction_3	23368.110483210992	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.7590.5	chr22	+	3280	4	full-splice_match	CECR7	ENST00000441006.5	2726	4	654	-1208	12	-3	multi-exon	FALSE	canonical	1	6287	junction_3	20886.354976927454	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.7590.6	chr22	+	2753	5	novel_not_in_catalog	CECR7	novel	2726	4	NA	NA	12	9849	any annotated donor/acceptor	FALSE	canonical	1	3454	junction_4	22283.79792584738	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.7590.7	chr22	+	3581	4	novel_not_in_catalog	CECR7	novel	2726	4	NA	NA	-6	10	any annotated donor/acceptor	FALSE	canonical	1	3465	junction_3	22196.618165837786	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	1707	2015	10.0	NA	False	AAAACA	-40
PB.7590.1	chr22	+	4876	4	novel_not_in_catalog	CECR7	novel	2726	4	NA	NA	-8	65	any annotated donor/acceptor	FALSE	canonical	1	3465	junction_3	22196.618165837786	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	1736	2044	10.0	NA	False	NA	NA
PB.7590.2	chr22	+	2085	4	full-splice_match	CECR7	ENST00000441006.5	2726	4	633	8	-9	-8	multi-exon	FALSE	canonical	1	6287	junction_3	20886.354976927454	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AAAACA	-22
PB.7590.3	chr22	+	2406	3	incomplete-splice_match	CECR7	ENST00000414401.5	546	4	11	7079	11	2053	3prime_fragment	FALSE	canonical	1	45324	junction_1	4560.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	73	222	76	297	70.0	NA	False	NA	NA
PB.208.1	chr1	+	4618	16	full-splice_match	WDTC1	ENST00000319394.7	4819	16	129	72	-23	-58	multi-exon	FALSE	canonical	1	130037	junction_1	97593.80945713492	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	407	2440	25.0	-6	True	NA	NA
PB.10113.13	chr6	-	2678	16	novel_not_in_catalog	MAP3K7	novel	4633	16	NA	NA	-37	-99	any annotated donor/acceptor	FALSE	canonical	1	25177	junction_12	126086.91373887916	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	610	1959	10.0	-16	True	AGTAAA	-15
PB.11147.7	chr8	-	3010	31	novel_not_in_catalog	NSMAF	novel	3569	31	NA	NA	16	-241	any annotated donor/acceptor	FALSE	canonical	1	589	junction_9	83690.14328517627	NA	0	NA	TRUE	NA	NA	NA	C	coding	918	2757	198	2954	35.0	0	True	ATTAAA	-30
PB.8284.21	chr3	-	2327	1	novel_in_catalog	CD47	novel	766	5	NA	NA	-8	-29250	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	126	491	45.0	-5	True	AATAAA	-6
PB.2090.4	chr11	-	1791	3	full-splice_match	ZDHHC24	ENST00000310442.4	4721	3	199	2731	-3	-2731	multi-exon	FALSE	canonical	1	153407	junction_2	24575.0	NA	1	1	TRUE	NA	NA	NA	C	coding	284	855	37	891	75.0	-1	True	NA	NA
PB.2090.2	chr11	-	4802	3	full-splice_match	ZDHHC24	ENST00000310442.4	4721	3	188	-269	-14	269	multi-exon	FALSE	canonical	1	153407	junction_2	24575.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	48	902	40.0	-12	True	NA	NA
PB.2090.3	chr11	-	4520	3	full-splice_match	ZDHHC24	ENST00000310442.4	4721	3	199	2	-3	-2	multi-exon	FALSE	canonical	1	153407	junction_2	24575.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	37	891	15.0	-1	True	NA	NA
PB.2090.1	chr11	-	1565	5	full-splice_match	ZDHHC24	ENST00000534073.5	1615	5	-1	51	-1	-51	multi-exon	FALSE	canonical	1	9813	junction_2	61602.54641652405	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	35	643	65.0	1	True	NA	NA
PB.11935.5	chrM	+	2265	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	-453	0	453	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-2	True	CATAAA	-5
PB.3478.2	chr14	-	2162	2	full-splice_match	SIX1	ENST00000645694.1	2726	2	-8	572	-8	-1	multi-exon	FALSE	canonical	1	149973	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	296	1150	20.0	-9	True	ATTAAA	-16
PB.1432.9	chr10	-	5249	25	novel_not_in_catalog	HERC4	novel	4371	23	NA	NA	159	-1	intron_retention	FALSE	canonical	1	15962	junction_22	110250.47607984103	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	1864	4803	20.0	-1	True	AATAAA	-20
PB.1432.8	chr10	-	3882	26	novel_in_catalog	HERC4	novel	4371	23	NA	NA	29	-1	no_combination_of_known_junctions	TRUE	canonical	1	2994	junction_16	112880.5467733462	NA	1	NA	TRUE	NA	NA	NA	C	coding	1080	3243	194	3436	20.0	-3	True	AATAAA	-20
PB.10113.10	chr6	-	2547	17	novel_not_in_catalog	MAP3K7	novel	4633	16	NA	NA	-22	0	any annotated donor/acceptor	FALSE	canonical	1	5356	junction_1	126950.19531787296	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	185	1924	85.0	-1	True	NA	NA
PB.11610.1	chr9	-	2584	4	full-splice_match	RFK	ENST00000376736.5	2684	4	90	10	90	-10	multi-exon	FALSE	canonical	1	179562	junction_3	51716.45601632897	NA	3	NA	TRUE	NA	NA	NA	C	coding	155	468	245	712	5.0	-3	True	AATAAA	-16
PB.3831.1	chr15	-	1842	2	full-splice_match	EIF3J-DT	ENST00000313807.4	2863	2	10	1011	10	565	multi-exon	FALSE	canonical	1	95318	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	120	363	3	365	15.0	-47	False	NA	NA
PB.1432.3	chr10	-	4429	25	full-splice_match	HERC4	ENST00000373700.8	3905	25	65	-589	0	-1	multi-exon	FALSE	canonical	1	203129	junction_24	72770.27286432465	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	249	3398	30.0	-1	True	AATAAA	-29
PB.1432.2	chr10	-	4561	25	novel_in_catalog	HERC4	novel	4371	23	NA	NA	-64	-1	combination_of_known_junctions	FALSE	canonical	1	15772	junction_24	93059.7484590993	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	381	3530	30.0	426	False	AATAAA	-29
PB.1432.1	chr10	-	4699	25	novel_not_in_catalog	HERC4	novel	4371	23	NA	NA	-36	-1	any annotated donor/acceptor	FALSE	canonical	1	7583	junction_24	94186.6166251338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	519	3668	30.0	454	False	AATAAA	-29
PB.1432.7	chr10	-	3767	25	full-splice_match	HERC4	ENST00000373700.8	3905	25	142	-4	51	-1	multi-exon	FALSE	canonical	1	203129	junction_24	72770.27286432465	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	172	3321	20.0	-6	True	AATAAA	-20
PB.1432.6	chr10	-	4064	25	novel_not_in_catalog	HERC4	novel	4371	23	NA	NA	14	-1	any annotated donor/acceptor	FALSE	canonical	1	7583	junction_24	94186.6166251338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	469	3618	20.0	504	False	AATAAA	-20
PB.1432.5	chr10	-	3994	25	novel_in_catalog	HERC4	novel	4371	23	NA	NA	-80	1	combination_of_known_junctions	FALSE	canonical	1	15772	junction_24	93059.7484590993	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	397	3546	25.0	410	False	AATAAA	-22
PB.1432.4	chr10	-	4426	26	full-splice_match	HERC4	ENST00000395198.7	4445	26	18	1	-8	-1	multi-exon	FALSE	canonical	1	8331	junction_10	111488.67167567473	NA	1	NA	TRUE	NA	NA	NA	C	coding	1057	3174	231	3404	25.0	17	True	AATAAA	-20
PB.5635.9	chr19	+	4139	13	novel_not_in_catalog	KDM4B	novel	5703	24	NA	NA	-4989	0	any annotated donor/acceptor	FALSE	canonical	1	13	junction_1	95125.49767938143	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	253	2055	20.0	-1622	False	ATTAAA	-18
PB.5635.2	chr19	+	4922	24	full-splice_match	KDM4B	ENST00000611640.4	5703	24	-1	782	-1	-292	multi-exon	FALSE	canonical	1	98421	junction_1	77592.4189358329	NA	2	1	TRUE	NA	NA	NA	C	coding	1130	3393	228	3620	60.0	-2	True	NA	NA
PB.5635.3	chr19	+	3989	24	full-splice_match	KDM4B	ENST00000611640.4	5703	24	0	1714	0	-43	multi-exon	FALSE	canonical	1	98421	junction_1	77592.4189358329	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	227	3619	85.0	-1	True	TATAAA	-13
PB.5635.1	chr19	+	5705	24	full-splice_match	KDM4B	ENST00000611640.4	5703	24	-2	0	-2	0	multi-exon	FALSE	canonical	1	98421	junction_1	77592.4189358329	NA	2	NA	TRUE	NA	NA	NA	C	coding	1130	3393	229	3621	20.0	-3	True	ATTAAA	-18
PB.5635.6	chr19	+	2701	8	incomplete-splice_match	KDM4B	ENST00000381759.8	3058	12	-18	34174	0	0	3prime_fragment	FALSE	canonical	1	98421	junction_1	92459.39689156003	NA	1	1	TRUE	NA	NA	NA	C	coding	299	900	226	1125	20.0	0	True	ATTAAA	-16
PB.5635.7	chr19	+	4721	8	incomplete-splice_match	KDM4B	ENST00000381759.8	3058	12	-17	32153	1	-1250	3prime_fragment	FALSE	canonical	1	98421	junction_1	92459.39689156003	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	225	1124	30.0	1	True	AATAAA	-23
PB.5635.4	chr19	+	5154	24	full-splice_match	KDM4B	ENST00000611640.4	5703	24	0	549	0	-59	multi-exon	FALSE	canonical	1	98421	junction_1	77592.4189358329	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	227	3619	80.0	-1	True	NA	NA
PB.5635.5	chr19	+	5610	23	full-splice_match	KDM4B	ENST00000159111.8	5593	23	-7	-10	0	10	multi-exon	FALSE	canonical	1	58430	junction_10	83447.15177770889	NA	2	NA	TRUE	NA	NA	NA	C	coding	1096	3291	226	3516	15.0	0	True	ATTAAA	-28
PB.3112.25	chr13	-	3573	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-12	1	intron_retention	FALSE	canonical	1	75878	junction_22	135480.38507333136	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	234	1802	20.0	-11	True	AATAAA	-21
PB.3112.24	chr13	-	2594	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	6	0	intron_retention	FALSE	canonical	1	75878	junction_22	130484.73952468233	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	216	2378	15.0	7	True	AATAAA	-24
PB.3112.27	chr13	-	3731	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-4	0	intron_retention	FALSE	canonical	1	92571	junction_7	132744.40158749596	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	253	1857	20.0	-1	True	AATAAA	-20
PB.3112.26	chr13	-	3000	26	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_25	153998.81852871468	NA	2	NA	TRUE	NA	NA	NA	C	coding	811	2436	352	2787	20.0	33	True	AATAAA	-21
PB.3112.21	chr13	-	3933	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	13384	junction_25	152339.1948491576	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	273	1880	20.0	29	True	AATACA	-19
PB.3112.20	chr13	-	2740	24	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	59174	junction_3	144764.39161165245	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	222	2348	25.0	1	True	AATACA	-20
PB.3112.23	chr13	-	2902	27	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_26	154496.57064109697	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	384	2723	15.0	1	True	AATAAA	-24
PB.3112.22	chr13	-	2793	26	novel_not_in_catalog	SUPT20H	novel	1876	9	NA	NA	9	4	intron_retention	FALSE	canonical	0	0	junction_25	148419.66792362797	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	375	2573	15.0	10	True	AATAAA	-28
PB.3112.29	chr13	-	2788	26	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-9	0	intron_retention	FALSE	canonical	1	13384	junction_25	141036.86902682434	NA	1	1	TRUE	NA	NA	NA	C	coding	779	2340	274	2613	20.0	28	True	AATAAA	-20
PB.3112.28	chr13	-	3572	25	novel_in_catalog	SUPT20H	novel	1876	9	NA	NA	-12	0	intron_retention	FALSE	canonical	1	92571	junction_6	122086.17255299179	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	198	1802	20.0	25	True	AATAAA	-20
PB.11395.2	chr8	+	2394	6	full-splice_match	HGH1	ENST00000347708.4	2531	6	14	123	14	-4	multi-exon	FALSE	canonical	1	94	junction_1	4063.746694861775	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	54	1226	20.0	NA	False	ATTAAA	-17
PB.5265.5	chr17	-	4605	17	novel_in_catalog	EXOC7	novel	353	2	NA	NA	-9	0	intron_retention	FALSE	canonical	1	21883	junction_8	231644.8370311404	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	76	1974	30.0	-14	True	AATAAA	-19
PB.5265.4	chr17	-	4734	19	full-splice_match	EXOC7	ENST00000411744.6	2031	19	-72	-2631	-6	0	multi-exon	FALSE	canonical	1	58829	junction_13	244993.97886030906	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	73	2103	30.0	-11	True	AATAAA	-19
PB.5265.1	chr17	-	4826	20	full-splice_match	EXOC7	ENST00000634349.1	2124	20	-71	-2631	-5	0	multi-exon	FALSE	canonical	1	101557	junction_13	261391.47432394684	NA	5	NA	TRUE	NA	NA	NA	C	coding	707	2124	72	2195	30.0	-10	True	AATAAA	-19
PB.5265.3	chr17	-	4782	19	full-splice_match	EXOC7	ENST00000589210.5	4751	19	-27	-4	-27	3	multi-exon	FALSE	canonical	1	110367	junction_12	235896.9030052321	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	94	2148	30.0	-32	True	AATAAA	-22
PB.5265.2	chr17	-	4655	18	full-splice_match	EXOC7	ENST00000332065.9	4596	18	-59	0	4	0	multi-exon	FALSE	canonical	1	414710	junction_12	153932.75863736522	NA	10	NA	TRUE	NA	NA	NA	C	coding	653	1962	63	2024	30.0	-1	True	AATAAA	-19
PB.3486.4	chr14	+	2339	10	full-splice_match	SNAPC1	ENST00000216294.4	2656	10	57	260	57	-260	multi-exon	FALSE	canonical	1	232264	junction_1	52775.49619068341	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	48	1154	70.0	-6	True	NA	NA
PB.3486.1	chr14	+	2605	10	full-splice_match	SNAPC1	ENST00000216294.4	2656	10	54	-3	54	3	multi-exon	FALSE	canonical	1	232264	junction_1	52775.49619068341	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	51	1157	25.0	-9	True	AATAAA	-21
PB.3486.2	chr14	+	1680	10	full-splice_match	SNAPC1	ENST00000216294.4	2656	10	31	945	31	-945	multi-exon	FALSE	canonical	1	232264	junction_1	52775.49619068341	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	74	1180	35.0	2	True	AATAAA	-33
PB.3486.3	chr14	+	1843	10	full-splice_match	SNAPC1	ENST00000216294.4	2656	10	55	758	55	-758	multi-exon	FALSE	canonical	1	232264	junction_1	52775.49619068341	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	50	1156	30.0	-8	True	AATAAA	-21
PB.8406.2	chr3	-	4353	19	full-splice_match	ACAD11	ENST00000496418.5	3684	19	-674	5	-241	1	multi-exon	FALSE	canonical	1	115057	junction_6	42302.053659396595	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	573	2264	25.0	621	False	ATTAAA	-17
PB.8515.1	chr3	+	5081	7	full-splice_match	SKIL	ENST00000259119.8	3057	7	-151	-1873	-103	1674	multi-exon	FALSE	canonical	1	89816	junction_1	93616.32040348994	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	823	2877	55.0	0	True	ATTAAA	-20
PB.8515.2	chr3	+	3514	7	full-splice_match	SKIL	ENST00000259119.8	3057	7	-45	-412	3	213	multi-exon	FALSE	canonical	1	89816	junction_1	93616.32040348994	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	717	2771	15.0	-34	True	AATAAA	-16
PB.4898.1	chr17	+	3272	2	full-splice_match	CDK5R1	ENST00000313401.3	4325	2	462	591	462	-591	multi-exon	FALSE	canonical	1	18925	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	228	1151	70.0	14	True	NA	NA
PB.4898.2	chr17	+	3850	2	full-splice_match	CDK5R1	ENST00000313401.3	4325	2	473	2	473	-2	multi-exon	FALSE	canonical	1	18925	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	217	1140	20.0	-2477	False	AATAAA	-18
PB.1242.11	chr1	+	4610	11	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-7	-248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	93332.44858831252	NA	3	NA	TRUE	NA	NA	NA	B	coding	189	570	209	778	40.0	5	True	TTTAAA	-10
PB.6321.6	chr2	-	2530	5	novel_not_in_catalog	AC064875.1	novel	1942	6	NA	NA	0	10960	any annotated donor/acceptor	FALSE	canonical	1	698	junction_1	1456.973639946859	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-17	True	NA	NA
PB.9682.1	chr5	+	2656	7	incomplete-splice_match	BTNL9	ENST00000327705.13	3500	11	12848	4	24	-4	5prime_fragment	FALSE	canonical	1	6484	junction_3	16730.229344413263	NA	4	NA	TRUE	NA	NA	NA	A	coding	332	999	1	999	50.0	18	True	AAAACA	-10
PB.1710.1	chr10	-	5432	9	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	137	2636	combination_of_known_junctions	FALSE	canonical	1	5060	junction_5	3847.3142255344833	NA	12	NA	TRUE	NA	NA	NA	B	coding	635	1908	22	1929	35.0	765	False	ATTAAA	-11
PB.1710.2	chr10	-	2824	9	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	107	-2	combination_of_known_junctions	FALSE	canonical	1	5060	junction_5	3847.3142255344833	NA	0	NA	TRUE	NA	NA	NA	B	coding	635	1908	52	1959	30.0	2	True	AATAAA	-21
PB.1710.3	chr10	-	3073	10	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	140	1	combination_of_known_junctions	FALSE	canonical	1	3344	junction_6	4425.275838511491	NA	0	NA	TRUE	NA	NA	NA	B	coding	732	2199	19	2217	40.0	-8	True	AATAAA	-12
PB.1710.4	chr10	-	3155	10	novel_not_in_catalog	C10orf90	novel	1595	6	NA	NA	-72	-2	any annotated donor/acceptor	FALSE	canonical	1	182	junction_8	5631.315555790573	NA	8	NA	TRUE	NA	NA	NA	B	coding	645	1938	353	2290	30.0	556	False	AATAAA	-21
PB.1710.5	chr10	-	2902	8	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	-44	-2	no_combination_of_known_junctions	FALSE	canonical	1	848	junction_7	5277.742668363947	NA	1	NA	TRUE	NA	NA	NA	B	coding	555	1668	370	2037	30.0	584	False	AATAAA	-21
PB.1710.6	chr10	-	3277	10	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	-202	-137	combination_of_known_junctions	FALSE	canonical	1	3344	junction_6	4425.275838511491	NA	1	NA	TRUE	NA	NA	NA	B	coding	796	2391	169	2559	40.0	9	True	ATTAAA	-15
PB.1710.7	chr10	-	2672	9	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	112	-137	combination_of_known_junctions	FALSE	canonical	1	5060	junction_5	3847.3142255344833	NA	0	NA	TRUE	NA	NA	NA	B	coding	635	1908	47	1954	40.0	740	False	ATTAAA	-15
PB.1710.8	chr10	-	2188	9	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	1	3344	junction_5	4090.070384479954	NA	1	NA	TRUE	NA	NA	NA	B	coding	718	2154	35	2188	80.0	683	False	NA	NA
PB.1710.9	chr10	-	1935	8	novel_in_catalog	C10orf90	novel	1595	6	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	1	5060	junction_4	3533.367180559227	NA	0	NA	TRUE	NA	NA	NA	B	coding	620	1860	74	1933	75.0	-3	True	NA	NA
PB.6990.65	chr2	-	7950	46	full-splice_match	FN1	ENST00000446046.5	7952	46	0	2	0	1	multi-exon	FALSE	canonical	1	1096730	junction_8	2599073.2752731657	NA	0	NA	TRUE	NA	NA	NA	C	coding	2330	6993	267	7259	30.0	-1	True	AATAAA	-16
PB.7405.3	chr20	+	1641	5	full-splice_match	GID8	ENST00000266069.4	4397	5	-79	2835	-79	-2835	multi-exon	FALSE	canonical	1	285226	junction_1	284634.29834647034	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	227	913	45.0	-10	True	AATAAA	-28
PB.7405.2	chr20	+	1416	5	full-splice_match	GID8	ENST00000266069.4	4397	5	-81	3062	-81	-3062	multi-exon	FALSE	canonical	1	285226	junction_1	284634.29834647034	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	229	915	30.0	-12	True	TATAAA	-18
PB.7405.1	chr20	+	4475	5	full-splice_match	GID8	ENST00000266069.4	4397	5	-80	2	-80	-2	multi-exon	FALSE	canonical	1	285226	junction_1	284634.29834647034	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	228	914	25.0	-11	True	AGTAAA	-21
PB.2948.4	chr12	-	2578	5	novel_not_in_catalog	PXN	novel	3835	11	NA	NA	8	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	421591.01021428336	NA	1	1	TRUE	NA	NA	NA	C	coding	121	366	342	707	10.0	0	True	AATAAA	-23
PB.2948.5	chr12	-	4542	13	novel_in_catalog	PXN	novel	3835	11	NA	NA	1	2	intron_retention	FALSE	canonical	1	65490	junction_12	392188.1423495404	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	904	2673	10.0	-41	False	AATAAA	-21
PB.4997.1	chr17	-	1306	8	full-splice_match	PSMC3IP	ENST00000393795.7	1416	8	90	20	-8	8	multi-exon	FALSE	canonical	1	81285	junction_7	67535.72182911495	NA	0	NA	TRUE	NA	NA	NA	A	coding	217	654	20	673	65.0	-22	True	NA	NA
PB.3081.7	chr13	-	7245	14	novel_not_in_catalog	SLC7A1	novel	7347	13	NA	NA	-40	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	110724.67317518475	NA	2	NA	TRUE	NA	NA	NA	C	coding	629	1890	291	2180	20.0	56	False	AATAAA	-14
PB.2948.1	chr12	-	3800	11	full-splice_match	PXN	ENST00000267257.11	3835	11	32	3	-2	-3	multi-exon	TRUE	canonical	1	53357	junction_5	306097.31973207474	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	111	1928	10.0	-10	True	AATAAA	-24
PB.2948.2	chr12	-	4443	12	novel_in_catalog	PXN	novel	3835	11	NA	NA	0	-4	intron_retention	FALSE	canonical	1	65490	junction_11	345416.7837865889	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	905	2572	10.0	-42	False	AATAAA	-23
PB.2948.3	chr12	-	3932	12	novel_in_catalog	PXN	novel	3835	11	NA	NA	0	-4	intron_retention	FALSE	canonical	1	8468	junction_10	355606.79104683606	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	787	2061	10.0	-8	True	AATAAA	-23
PB.3081.8	chr13	-	7177	13	novel_not_in_catalog	SLC7A1	novel	7347	13	NA	NA	-45	-5	any annotated donor/acceptor	FALSE	canonical	1	780	junction_12	104807.50410829237	NA	2	NA	TRUE	NA	NA	NA	C	coding	629	1890	223	2112	20.0	51	False	AATAAA	-14
PB.2948.8	chr12	-	4948	11	novel_in_catalog	PXN	novel	3835	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	37021	junction_5	309784.43366386247	NA	13	1	TRUE	NA	NA	NA	C	coding	568	1707	101	1807	15.0	0	True	AATAAA	-18
PB.2948.9	chr12	-	4093	13	novel_in_catalog	PXN	novel	3835	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	25145	junction_6	379422.2761002355	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	143	2227	15.0	-42	False	AATAAA	-18
PB.11722.4	chr9	-	5325	16	novel_not_in_catalog	PTBP3	novel	7995	14	NA	NA	0	-171	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	217369.30557545504	NA	10	2	TRUE	NA	NA	NA	C	coding	555	1668	191	1858	30.0	-49	False	ATTAAA	-15
PB.7526.9	chr21	+	4342	9	full-splice_match	BACE2	ENST00000330333.10	2993	9	370	-1719	370	1719	multi-exon	FALSE	canonical	1	334894	junction_1	86095.72165246874	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	94	1650	50.0	11	True	AATAAA	-41
PB.7526.8	chr21	+	2528	9	full-splice_match	BACE2	ENST00000330333.10	2993	9	450	15	450	-15	multi-exon	FALSE	canonical	1	334894	junction_1	86095.72165246874	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	14	1570	45.0	62	False	AATAAA	-15
PB.6160.12	chr19	+	4082	25	novel_in_catalog	POLD1	novel	3474	26	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	176303	junction_1	96308.56109833432	NA	2	NA	TRUE	NA	NA	NA	C	coding	977	2934	43	2976	10.0	3	True	AATAAA	-17
PB.7526.3	chr21	+	1305	1	novel_in_catalog	BACE2	novel	2993	9	NA	NA	342	-72392	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	204	615	122	736	90.0	-46	False	AAGAAA	-25
PB.7526.2	chr21	+	1893	9	full-splice_match	BACE2	ENST00000330333.10	2993	9	359	741	359	232	multi-exon	FALSE	canonical	1	334894	junction_1	86095.72165246874	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	105	1661	35.0	0	True	ATTAAA	-22
PB.7526.1	chr21	+	1732	8	full-splice_match	BACE2	ENST00000328735.10	2824	8	314	778	314	195	multi-exon	FALSE	canonical	1	16960	junction_7	171203.06683787494	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	150	1340	80.0	-5	True	NA	NA
PB.7526.7	chr21	+	8555	9	full-splice_match	BACE2	ENST00000330333.10	2993	9	369	-5931	369	10	multi-exon	FALSE	canonical	1	334894	junction_1	86095.72165246874	NA	7	NA	TRUE	NA	NA	NA	C	coding	518	1557	95	1651	20.0	10	True	AATAAA	-34
PB.7526.6	chr21	+	2358	10	novel_not_in_catalog	BACE2	novel	2993	9	NA	NA	367	195	any annotated donor/acceptor	FALSE	canonical	1	3137	junction_2	206479.17253213594	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	892	2163	80.0	8	True	NA	NA
PB.7526.5	chr21	+	1769	8	novel_in_catalog	BACE2	novel	2993	9	NA	NA	349	195	no_combination_of_known_junctions	FALSE	canonical	1	3920	junction_1	222518.09349188957	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	115	432	80.0	-10	True	NA	NA
PB.7526.4	chr21	+	1940	10	novel_not_in_catalog	BACE2	novel	2993	9	NA	NA	366	196	any annotated donor/acceptor	FALSE	canonical	1	4189	junction_4	184014.56670929582	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	98	1744	80.0	7	True	NA	NA
PB.8271.20	chr3	+	2778	6	novel_not_in_catalog	PCNP	novel	2342	5	NA	NA	8	-2	any annotated donor/acceptor	FALSE	canonical	1	621	junction_2	170394.79166218668	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	22	True	AATAAA	-13
PB.9865.3	chr6	-	1425	7	novel_in_catalog	HLA-C	novel	754	2	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	16555	junction_3	5348765.848268261	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	27	1007	15.0	-6	True	AATAAA	-19
PB.1035.1	chr1	+	3857	24	full-splice_match	IPO9	ENST00000361565.8	11435	24	38	7540	30	381	multi-exon	FALSE	canonical	1	291621	junction_1	124988.49038506403	NA	0	NA	TRUE	NA	NA	NA	C	coding	1041	3126	32	3157	75.0	-24	True	NA	NA
PB.9865.2	chr6	-	1451	8	full-splice_match	HLA-C	ENST00000376228.9	1536	8	-6	91	-2	-91	multi-exon	FALSE	canonical	1	4557151	junction_7	4061776.1152898497	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	22	1122	35.0	-1	True	TATAAA	-12
PB.147.3	chr1	-	3741	19	full-splice_match	ECE1	ENST00000415912.6	5099	19	0	1358	0	-21	multi-exon	FALSE	canonical	1	258619	junction_18	181641.51616856604	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	130	2391	80.0	-1	True	NA	NA
PB.145.12	chr1	-	3704	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-2	3	intron_retention	FALSE	canonical	1	5900	junction_11	394934.6722734268	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	39	1586	25.0	-17	True	AATAAA	-19
PB.6282.1	chr19	-	2677	6	full-splice_match	MZF1	ENST00000215057.6	2905	6	242	-14	-22	12	multi-exon	FALSE	canonical	1	52685	junction_5	48081.442550738844	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	320	2524	15.0	-19	True	NA	NA
PB.6282.3	chr19	-	2554	6	full-splice_match	MZF1	ENST00000599369.5	2587	6	30	3	30	-3	multi-exon	FALSE	canonical	1	16763	junction_5	57989.12857976054	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	214	2418	25.0	27	False	NA	NA
PB.6282.2	chr19	-	3109	1	full-splice_match	MZF1	ENST00000600004.1	2683	1	-430	4	-430	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	450	1353	1620	2972	25.0	8529	False	NA	NA
PB.145.14	chr1	-	4004	13	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	1	-1	intron_retention	FALSE	canonical	1	222513	junction_12	333508.870958761	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	229	1890	25.0	-16	True	AATAAA	-15
PB.8271.21	chr3	+	4025	5	full-splice_match	PCNP	ENST00000265260.7	2342	5	109	-1792	10	1792	multi-exon	FALSE	canonical	1	221699	junction_2	233417.51706906554	NA	3	NA	TRUE	NA	NA	NA	C	coding	178	537	13	549	10.0	-21	False	AATAAA	-23
PB.9865.5	chr6	-	3178	2	full-splice_match	HLA-C	ENST00000466892.5	754	2	-2426	2	-2	-2	multi-exon	FALSE	canonical	1	15412509	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	765	1130	15.0	-1	True	AATAAA	-19
PB.9097.1	chr4	+	3292	20	novel_not_in_catalog	SNX25	novel	3151	18	NA	NA	-497	-17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	106003.75459398673	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	288	2810	70.0	NA	False	NA	NA
PB.9097.2	chr4	+	3162	19	novel_not_in_catalog	SNX25	novel	3151	18	NA	NA	-464	-17	any annotated donor/acceptor	FALSE	canonical	1	10	junction_1	100086.54333637809	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	158	2680	70.0	NA	False	NA	NA
PB.9865.4	chr6	-	3333	1	novel_in_catalog	HLA-C	novel	1536	8	NA	NA	3	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	121	366	756	1121	15.0	8	True	AATAAA	-19
PB.3910.4	chr15	+	2736	4	incomplete-splice_match	LACTB	ENST00000413507.3	2978	5	0	2037	0	1841	3prime_fragment	FALSE	canonical	1	219163	junction_1	41853.03271634632	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	40	1002	50.0	-6	True	AATATA	-16
PB.3910.5	chr15	+	2017	5	full-splice_match	LACTB	ENST00000413507.3	2978	5	-3	964	-3	-964	multi-exon	FALSE	canonical	1	219163	junction_1	41474.48548204064	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	43	1164	90.0	-9	True	NA	NA
PB.3910.6	chr15	+	1932	6	full-splice_match	LACTB	ENST00000261893.8	1972	6	34	6	1	-6	multi-exon	FALSE	canonical	1	219163	junction_1	39731.16039382691	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	39	1682	35.0	-5	True	AATAAA	-11
PB.3910.7	chr15	+	2583	5	novel_not_in_catalog	LACTB	novel	1972	6	NA	NA	5	1801	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	124180.10179045393	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	35	889	25.0	-1	True	AGTAAA	-19
PB.11020.1	chr8	+	1924	1	novel_in_catalog	PPP3CC	novel	1598	8	NA	NA	-93	-32472	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	1	True	AATAAA	-7
PB.3910.1	chr15	+	1855	7	novel_not_in_catalog	LACTB	novel	1972	6	NA	NA	3	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	101907.08518997424	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	70	1605	35.0	0	True	AATAAA	-11
PB.3910.2	chr15	+	1782	6	full-splice_match	LACTB	ENST00000261893.8	1972	6	26	164	-7	-164	multi-exon	FALSE	canonical	1	219163	junction_1	39731.16039382691	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	47	1690	50.0	-13	True	AATAAA	-5
PB.3910.3	chr15	+	2979	5	full-splice_match	LACTB	ENST00000413507.3	2978	5	-3	2	-3	-2	multi-exon	FALSE	canonical	1	219163	junction_1	41474.48548204064	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	43	1164	15.0	-9	True	AATAAA	-35
PB.8555.7	chr3	-	2486	16	incomplete-splice_match	ABCC5	ENST00000265586.10	5712	29	58	41573	8	5793	3prime_fragment	FALSE	canonical	1	72288	junction_11	53734.566285275505	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2379	108	2486	20.0	2	True	NA	NA
PB.3910.8	chr15	+	1901	6	novel_not_in_catalog	LACTB	novel	1972	6	NA	NA	5	-964	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	111418.71566662398	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	35	1048	90.0	-1	True	NA	NA
PB.7786.2	chr22	+	1536	8	full-splice_match	APOBEC3B	ENST00000333467.3	1533	8	-9	6	1	-6	multi-exon	FALSE	canonical	1	75139	junction_1	53559.156996764636	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	55	1203	30.0	0	True	AATAAA	-38
PB.7786.1	chr22	+	1870	7	full-splice_match	APOBEC3B	ENST00000402182.7	1844	7	-52	26	0	-6	multi-exon	FALSE	canonical	1	75139	junction_1	45661.39739946887	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	108	1580	30.0	0	True	AATAAA	-38
PB.77.7	chr1	+	5280	24	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	1656	junction_1	74738.18795270384	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	281	3415	60.0	0	True	AGTAAA	-9
PB.77.6	chr1	+	5366	25	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	117	junction_2	80342.14626951852	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	367	3501	60.0	0	True	AGTAAA	-9
PB.77.5	chr1	+	5386	24	novel_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	4242	junction_11	69689.13273522296	NA	1	NA	TRUE	NA	NA	NA	C	coding	1103	3312	210	3521	60.0	0	True	AGTAAA	-9
PB.9865.8	chr6	-	1696	9	novel_not_in_catalog	HLA-C	novel	754	2	NA	NA	-529	-2	intron_retention	FALSE	canonical	1	2442	junction_8	5301049.333955034	NA	3	1	TRUE	NA	NA	NA	C	coding	372	1119	160	1278	15.0	423	False	AATAAA	-19
PB.7262.8	chr20	-	2264	14	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	0	-1	intron_retention	FALSE	canonical	1	262291	junction_13	379136.013162612	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	100	1098	15.0	-1	True	AATAAA	-16
PB.7262.9	chr20	-	2052	17	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	82619	junction_15	464365.42326491105	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	243	1856	15.0	15	False	AATAAA	-16
PB.77.1	chr1	+	5245	25	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-21757	-8	intron_retention	FALSE	canonical	1	2104	junction_1	76325.43683392115	NA	1	NA	TRUE	NA	NA	NA	C	coding	1044	3135	246	3380	60.0	2	True	AGTAAA	-9
PB.7262.4	chr20	-	2854	16	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	61045	junction_13	506910.558681904	NA	2	NA	TRUE	NA	NA	NA	C	coding	428	1287	374	1660	10.0	-5	True	AATAAA	-26
PB.7262.5	chr20	-	1967	16	full-splice_match	CPNE1	ENST00000397443.6	1928	16	-32	-7	-7	-6	multi-exon	FALSE	canonical	1	337743	junction_15	341376.3291234405	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	150	1763	10.0	-9	True	AATAAA	-24
PB.7262.6	chr20	-	1787	16	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	53636	junction_1	476103.5057272688	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	143	1588	10.0	-2	True	AATAAA	-19
PB.7262.7	chr20	-	2313	14	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	337743	junction_13	362358.25996921497	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	149	1147	15.0	-8	True	AATAAA	-16
PB.8477.1	chr3	-	4158	1	antisense	novelGene_RAP2B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6622	False	TTTAAA	-30
PB.7262.1	chr20	-	2429	15	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	1	-1	intron_retention	FALSE	canonical	1	262291	junction_14	369492.2536861723	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	131	1417	10.0	0	True	AATAAA	-29
PB.7262.2	chr20	-	2039	17	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	82619	junction_15	493112.0503480294	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	217	1830	10.0	9	False	AATAAA	-29
PB.7262.3	chr20	-	1865	15	novel_in_catalog	CPNE1	novel	2147	18	NA	NA	2	-1	no_combination_of_known_junctions	TRUE	canonical	1	51793	junction_4	498525.71793164825	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	98	1114	10.0	1	True	AATAAA	-29
PB.8306.2	chr3	+	2944	16	novel_not_in_catalog	ATP6V1A	novel	4591	15	NA	NA	-691	710	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	148445.97141706324	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	111	1964	85.0	-16	True	AATATA	-17
PB.8306.3	chr3	+	3014	16	novel_not_in_catalog	ATP6V1A	novel	4591	15	NA	NA	2	710	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	188787.41282541997	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	181	2034	85.0	-32	True	AATATA	-17
PB.8306.1	chr3	+	2904	15	full-splice_match	ATP6V1A	ENST00000273398.7	4591	15	38	1649	7	710	multi-exon	FALSE	canonical	1	363384	junction_2	81460.94560100063	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	71	1924	85.0	-10	True	AATATA	-17
PB.8306.6	chr3	+	4545	15	full-splice_match	ATP6V1A	ENST00000273398.7	4591	15	43	3	12	-3	multi-exon	FALSE	canonical	1	363384	junction_2	81460.94560100063	NA	41	3	TRUE	NA	NA	NA	C	coding	617	1854	66	1919	15.0	-5	True	AATAAA	-15
PB.3288.1	chr14	-	2585	18	incomplete-splice_match	TEP1	ENST00000555727.5	7832	54	34951	-77	-259	77	5prime_fragment	TRUE	canonical	1	77681	junction_17	50382.56055188845	NA	0	NA	TRUE	NA	NA	NA	A	coding	763	2292	174	2465	45.0	NA	False	NA	NA
PB.8306.4	chr3	+	4321	15	full-splice_match	ATP6V1A	ENST00000273398.7	4591	15	17	253	-1	-253	multi-exon	FALSE	canonical	1	363384	junction_2	81460.94560100063	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	92	1945	40.0	-31	True	NA	NA
PB.8306.5	chr3	+	3733	15	full-splice_match	ATP6V1A	ENST00000273398.7	4591	15	17	841	-1	-841	multi-exon	FALSE	canonical	1	363384	junction_2	81460.94560100063	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	92	1945	30.0	-31	True	AATAAA	-21
PB.6017.1	chr19	-	995	6	full-splice_match	EXOSC5	ENST00000221233.8	1118	6	121	2	-2	0	multi-exon	FALSE	canonical	1	354170	junction_3	114544.88298758701	NA	0	NA	TRUE	NA	NA	NA	A	coding	235	708	31	738	35.0	-3	True	NA	NA
PB.340.3	chr1	+	4553	6	novel_in_catalog	YBX1	novel	1514	8	NA	NA	0	11	intron_retention	FALSE	canonical	1	6335	junction_3	1446803.3073626836	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	3759	4142	20.0	9	True	AATAAA	-25
PB.11406.4	chr8	-	3492	20	novel_in_catalog	RECQL4	novel	3896	20	NA	NA	28	0	intron_retention	FALSE	canonical	1	8478	junction_17	97367.73801490155	NA	1	NA	TRUE	NA	NA	NA	C	coding	851	2556	800	3355	5.0	28	True	AATAAA	-15
PB.10779.10	chr7	+	2588	6	full-splice_match	CBLL1	ENST00000440859.7	4432	6	448	1396	0	585	multi-exon	FALSE	canonical	1	76216	junction_1	91358.01410845137	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	20	1495	25.0	0	True	AATATA	-29
PB.11406.1	chr8	-	3877	21	full-splice_match	RECQL4	ENST00000617875.4	3809	21	-62	-6	-43	3	multi-exon	TRUE	canonical	1	28510	junction_20	95338.09958640617	NA	0	NA	TRUE	NA	NA	NA	C	coding	1208	3627	105	3731	15.0	9144	False	AATAAA	-24
PB.9696.19	chr6	-	2271	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	1876	-29	-1876	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	35.0	-1	True	AGTAAA	-17
PB.9696.18	chr6	-	2610	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	1537	-29	-1537	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	30.0	-1	True	NA	NA
PB.9696.16	chr6	-	2748	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	1399	-29	-1399	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	30.0	-1	True	NA	NA
PB.9696.12	chr6	-	2801	6	novel_in_catalog	SERPINB9	novel	4118	7	NA	NA	-29	-1203	no_combination_of_known_junctions	FALSE	canonical	1	2376	junction_2	147932.79322989882	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	120	590	30.0	-1	True	NA	NA
PB.9696.11	chr6	-	3066	8	novel_not_in_catalog	SERPINB9	novel	4118	7	NA	NA	-28	-1203	any annotated donor/acceptor	FALSE	canonical	1	1938	junction_6	161987.20375450674	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	395	1372	30.0	0	True	NA	NA
PB.9696.10	chr6	-	2944	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	1203	-29	-1203	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	3	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	30.0	-1	True	NA	NA
PB.7214.3	chr20	-	3190	10	novel_not_in_catalog	ABHD12	novel	474	2	NA	NA	-91	-16	intron_retention	FALSE	canonical	0	0	junction_7	313317.1525338991	NA	12	1	TRUE	NA	NA	NA	C	coding	167	504	686	1189	5.0	-10	True	AATAAA	-16
PB.7214.2	chr20	-	3313	12	incomplete-splice_match	ABHD12	ENST00000376542.7	1725	13	129	5471	-101	-16	3prime_fragment	FALSE	canonical	1	328503	junction_11	163109.3243125173	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	152	1312	5.0	-20	True	AATAAA	-16
PB.7214.1	chr20	-	1575	13	full-splice_match	ABHD12	ENST00000376542.7	1725	13	148	2	-82	-2	multi-exon	TRUE	canonical	1	97358	junction_1	216442.21143842104	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	133	1347	35.0	-1	True	AATAAA	-22
PB.9602.3	chr5	-	2140	17	novel_in_catalog	SLU7	novel	3793	16	NA	NA	-38	4	combination_of_known_junctions	FALSE	canonical	1	7814	junction_16	216707.8056159376	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	244	2004	20.0	-1	True	AATAAA	-19
PB.9602.4	chr5	-	1572	15	incomplete-splice_match	SLU7	ENST00000297151.8	3793	16	305	2891	-8	-1379	3prime_fragment	FALSE	canonical	1	315197	junction_14	100764.92773456467	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1488	84	1571	75.0	314	False	AAGAAA	-13
PB.9602.5	chr5	-	1991	15	novel_in_catalog	SLU7	novel	3793	16	NA	NA	0	-1379	intron_retention	FALSE	canonical	1	16748	junction_14	169667.8270789541	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1488	503	1990	75.0	-1	True	AAGAAA	-13
PB.7214.4	chr20	-	1926	13	full-splice_match	ABHD12	ENST00000339157.9	2117	13	175	16	-48	-16	multi-exon	FALSE	canonical	1	328503	junction_12	156856.84471968914	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	99	1295	5.0	33	True	AATAAA	-16
PB.7309.1	chr20	-	3156	1	antisense	novelGene_YWHAB_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1738.2	chr11	+	2358	2	full-splice_match	IFITM1	ENST00000408968.3	855	2	204	-1707	204	1707	multi-exon	FALSE	canonical	1	2308700	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	115	492	55.0	-5	True	NA	NA
PB.1738.3	chr11	+	1210	1	novel_in_catalog	IFITM2	novel	382	2	NA	NA	5654	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	114	345	110	454	20.0	0	True	AATAAA	-16
PB.11395.1	chr8	+	2522	6	full-splice_match	HGH1	ENST00000347708.4	2531	6	16	-7	16	7	multi-exon	FALSE	canonical	1	94	junction_1	4063.746694861775	NA	3	NA	TRUE	NA	NA	NA	C	coding	390	1173	52	1224	20.0	NA	False	AATAAA	-26
PB.1738.1	chr11	+	689	2	full-splice_match	IFITM1	ENST00000408968.3	855	2	165	1	165	-1	multi-exon	FALSE	canonical	1	2308700	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	154	531	20.0	-22	True	AATAAA	-16
PB.11722.7	chr9	-	7019	15	full-splice_match	PTBP3	ENST00000334318.10	7990	15	80	891	-6	-172	multi-exon	FALSE	canonical	1	12613	junction_14	198065.015184576	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	108	1775	30.0	-1	True	ATTAAA	-14
PB.677.4	chr1	-	2856	14	full-splice_match	PIAS3	ENST00000393045.6	2901	14	45	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	46	1932	20.0	-1	True	AATAAA	-15
PB.677.5	chr1	-	2557	14	novel_in_catalog	PIAS3	novel	2386	4	NA	NA	27	-375	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	149	2008	75.0	-28	True	NA	NA
PB.10283.2	chr6	+	2888	1	antisense	novelGene_ZBTB2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	256	771	27	797	55.0	-5854	False	NA	NA
PB.11020.4	chr8	+	2089	14	full-splice_match	PPP3CC	ENST00000240139.9	2189	14	-29	129	-29	-60	multi-exon	FALSE	canonical	1	144996	junction_12	63230.024205698784	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	357	1895	5.0	1	True	TATAAA	-36
PB.5024.6	chr17	-	2175	12	novel_in_catalog	ETV4	novel	2147	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	10490	junction_6	98463.8377296268	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	208	1500	5.0	-1	True	AATAAA	-20
PB.7518.14	chr21	-	3014	3	full-splice_match	VPS26C	ENST00000475009.1	715	3	15	-2314	15	2314	multi-exon	FALSE	canonical	1	296255	junction_2	13690.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	95	460	75.0	165	False	NA	NA
PB.7538.5	chr21	-	2130	11	full-splice_match	WDR4	ENST00000398208.2	2122	11	-6	-2	-6	2	multi-exon	FALSE	canonical	1	136088	junction_4	33330.09899490249	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	67	1305	0.0	17	False	AATATA	-16
PB.7518.12	chr21	-	2876	8	full-splice_match	VPS26C	ENST00000309117.10	3256	8	118	262	-11	-262	multi-exon	FALSE	canonical	1	296255	junction_7	58409.297192575534	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	121	1014	40.0	139	False	AATAAA	-19
PB.7518.13	chr21	-	2024	6	novel_in_catalog	VPS26C	novel	3256	8	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	1414	junction_1	152793.47685212217	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	64	789	25.0	-24	True	NA	NA
PB.7518.10	chr21	-	2753	5	full-splice_match	VPS26C	ENST00000399001.5	821	5	-58	-1874	-6	-5	multi-exon	FALSE	canonical	1	11378	junction_4	168980.81490124107	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	116	634	30.0	144	False	AATAAA	-17
PB.2951.11	chr12	+	2083	5	novel_not_in_catalog	AL021546.1	novel	552	5	NA	NA	8264	1893	any annotated donor/acceptor	FALSE	canonical	1	601	junction_4	115405.17339573646	NA	2	NA	TRUE	NA	NA	NA	B	coding	136	411	20	430	90.0	18	True	NA	NA
PB.11488.6	chr9	-	2286	7	novel_in_catalog	CAAP1	novel	2791	6	NA	NA	-17	477	no_combination_of_known_junctions	FALSE	canonical	1	16818	junction_2	114172.50847000488	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	107	820	55.0	-20	True	AATAAA	-43
PB.4753.1	chr17	+	6168	37	novel_in_catalog	CHD3	novel	7356	40	NA	NA	263	389	combination_of_known_junctions	FALSE	canonical	1	236911	junction_3	201968.64240109036	NA	4	1	TRUE	NA	NA	NA	B	coding	1828	5487	63	5549	10.0	-6989	False	AATAAA	-24
PB.4753.2	chr17	+	5813	35	novel_in_catalog	CHD3	novel	7356	40	NA	NA	-7	387	combination_of_known_junctions	FALSE	canonical	1	114505	junction_28	219671.27891122276	NA	1	1	TRUE	NA	NA	NA	B	coding	1713	5142	55	5196	15.0	-4165	False	AATAAA	-22
PB.4753.3	chr17	+	5167	28	novel_in_catalog	CHD3	novel	7356	40	NA	NA	3946	-5	combination_of_known_junctions	FALSE	canonical	1	90244	junction_25	241452.06792403513	NA	19	3	TRUE	NA	NA	NA	B	coding	1369	4110	7	4116	5.0	-7565	False	TATAAA	-16
PB.11020.5	chr8	+	2169	14	novel_not_in_catalog	PPP3CC	novel	1598	8	NA	NA	-25	-60	any annotated donor/acceptor	FALSE	canonical	1	27033	junction_8	98854.64116324935	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	353	1330	5.0	5	True	TATAAA	-36
PB.3106.15	chr13	-	2897	10	novel_in_catalog	SPART	novel	4789	9	NA	NA	20	-117	no_combination_of_known_junctions	FALSE	canonical	1	21718	junction_9	190983.1139117595	NA	2	NA	TRUE	NA	NA	NA	C	coding	666	2001	251	2251	20.0	-14	True	AATAAA	-21
PB.11438.2	chr9	+	5230	25	novel_not_in_catalog	JAK2	novel	2615	16	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	1	9183	junction_1	50480.72469543243	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	448	3840	15.0	1	True	ATTAAA	-21
PB.3106.17	chr13	-	2891	9	novel_not_in_catalog	SPART	novel	4789	9	NA	NA	12	-117	any annotated donor/acceptor	FALSE	canonical	1	11072	junction_8	167104.95911397834	NA	3	1	TRUE	NA	NA	NA	C	coding	666	2001	245	2245	20.0	31	True	AATAAA	-21
PB.3106.16	chr13	-	2756	9	full-splice_match	SPART	ENST00000438666.6	4789	9	-48	2081	-48	-117	multi-exon	FALSE	canonical	1	138990	junction_8	127840.2251200082	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	110	2110	20.0	28	True	AATAAA	-21
PB.3106.11	chr13	-	2939	10	novel_in_catalog	SPART	novel	4789	9	NA	NA	-41	1	no_combination_of_known_junctions	FALSE	canonical	1	8056	junction_9	193941.79501618203	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	175	2175	20.0	35	True	ATTAAA	-18
PB.3106.10	chr13	-	2908	9	full-splice_match	SPART	ENST00000451493.5	4944	9	80	1956	60	6	multi-exon	FALSE	canonical	1	113809	junction_8	135424.91500620372	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	139	2139	15.0	-22	True	ATTAAA	-23
PB.3106.13	chr13	-	2926	9	novel_in_catalog	SPART	novel	4789	9	NA	NA	19	-6	no_combination_of_known_junctions	FALSE	canonical	1	277	junction_3	221044.47473302743	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	164	1672	45.0	269	False	ATTAAA	-11
PB.3106.12	chr13	-	2927	9	novel_not_in_catalog	SPART	novel	4789	9	NA	NA	95	2	any annotated donor/acceptor	FALSE	canonical	1	11072	junction_8	167104.95911397834	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	162	2162	20.0	-39	True	ATTAAA	-19
PB.249.1	chr1	+	3980	14	full-splice_match	KPNA6	ENST00000373625.7	7378	14	3	3395	3	0	multi-exon	FALSE	canonical	1	258615	junction_2	43813.74801421643	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	91	1701	100.0	-15	True	ATTAAA	-21
PB.7944.3	chr3	-	3631	3	full-splice_match	RPL32	ENST00000452606.2	631	3	3	-3003	3	-1	multi-exon	FALSE	canonical	1	4183515	junction_2	4283648.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	93	282	53	334	10.0	5	True	AATAAA	-14
PB.249.3	chr1	+	2233	14	full-splice_match	KPNA6	ENST00000373625.7	7378	14	15	5130	-5	-1735	multi-exon	FALSE	canonical	1	258615	junction_2	43813.74801421643	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	79	1689	25.0	-3	True	AAAACA	-43
PB.249.2	chr1	+	4081	15	novel_not_in_catalog	KPNA6	novel	7378	14	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	17266	junction_1	118687.13509045365	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	202	1803	95.0	-7	True	ATTAAA	-20
PB.3106.19	chr13	-	2825	10	novel_in_catalog	SPART	novel	4789	9	NA	NA	-45	-117	no_combination_of_known_junctions	FALSE	canonical	1	8056	junction_9	193941.79501618203	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	179	2179	20.0	31	True	AATAAA	-21
PB.3106.18	chr13	-	2812	9	full-splice_match	SPART	ENST00000451493.5	4944	9	53	2079	33	-117	multi-exon	FALSE	canonical	1	113809	junction_8	135424.91500620372	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	166	2166	20.0	-1	True	AATAAA	-21
PB.7542.3	chr21	-	4672	7	full-splice_match	U2AF1	ENST00000475639.5	4694	7	-45	67	1	-66	multi-exon	FALSE	canonical	1	635048	junction_1	935886.4188879973	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	4090	4593	85.0	-16	True	NA	NA
PB.7542.2	chr21	-	2168	7	novel_in_catalog	U2AF1	novel	1676	3	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	851623	junction_5	899551.3064462409	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	86	664	30.0	13	False	AATAAA	-13
PB.6202.1	chr19	+	2028	3	full-splice_match	MYADM	ENST00000391771.1	3111	3	-11	1094	-11	715	multi-exon	FALSE	canonical	1	47822	junction_1	514619.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	224	1192	30.0	-11	True	ATTAAA	-16
PB.586.4	chr1	-	4386	12	novel_not_in_catalog	AL449266.1	novel	557	6	NA	NA	31	-92279	intron_retention	FALSE	canonical	1	5454	junction_11	100126.51573743594	NA	2	NA	TRUE	NA	NA	NA	B	coding	551	1656	123	1778	15.0	-1	True	AATAAA	-13
PB.6202.3	chr19	+	2151	3	full-splice_match	MYADM	ENST00000391770.8	3056	3	2	903	2	-894	multi-exon	FALSE	canonical	1	667979	junction_1	204540.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	147	1115	90.0	2	True	GGGGCT	-35
PB.6202.2	chr19	+	1966	3	full-splice_match	MYADM	ENST00000391770.8	3056	3	-11	1101	-11	717	multi-exon	FALSE	canonical	1	667979	junction_1	204540.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	160	1128	25.0	-11	True	ATTAAA	-18
PB.6202.5	chr19	+	2099	3	novel_not_in_catalog	MYADM	novel	1009	3	NA	NA	-136	-894	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	538530.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	213	1181	90.0	-93	True	GGGGCT	-35
PB.6202.4	chr19	+	1858	4	novel_not_in_catalog	MYADM	novel	1009	3	NA	NA	10	-894	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	443922.09684458026	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	139	1107	90.0	10	True	GGGGCT	-35
PB.6202.6	chr19	+	2044	3	novel_not_in_catalog	MYADM	novel	1009	3	NA	NA	-119	-894	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	538530.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	196	1164	90.0	-76	True	GGGGCT	-35
PB.9220.16	chr5	+	2890	25	novel_in_catalog	PARP8	novel	597	7	NA	NA	0	-6	intron_retention	FALSE	canonical	1	20629	junction_4	66416.6617396485	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	800	2623	35.0	-1	True	AATAAA	-8
PB.9220.17	chr5	+	2927	25	incomplete-splice_match	PARP8	ENST00000505554.5	3825	26	328	1039	1	-6	5prime_fragment	FALSE	canonical	1	143991	junction_1	49640.184581143534	NA	1	1	TRUE	NA	NA	NA	C	coding	607	1824	837	2660	35.0	-425	False	AATAAA	-8
PB.9220.14	chr5	+	5879	26	full-splice_match	PARP8	ENST00000281631.9	7177	26	25	1273	-4	-1273	multi-exon	FALSE	canonical	1	143991	junction_2	48713.488288973924	NA	2	NA	TRUE	NA	NA	NA	C	coding	852	2559	140	2698	30.0	-5	True	AATAAA	-13
PB.9220.15	chr5	+	3057	27	novel_in_catalog	PARP8	novel	597	7	NA	NA	0	-7	intron_retention	FALSE	canonical	1	9004	junction_3	79134.00408901197	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	407	2791	30.0	-1	True	AATAAA	-7
PB.9220.12	chr5	+	3010	25	novel_in_catalog	PARP8	novel	597	7	NA	NA	-10	-7	no_combination_of_known_junctions	FALSE	canonical	1	6781	junction_8	81226.27884187644	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	921	2744	30.0	-17	True	AATAAA	-7
PB.9220.13	chr5	+	3666	2	full-splice_match	PARP8	ENST00000513414.1	484	2	194	-3376	-12	1987	multi-exon	FALSE	canonical	1	234220	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-13	True	TTTAAA	-28
PB.9220.10	chr5	+	2863	27	novel_in_catalog	PARP8	novel	597	7	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	1	19189	junction_1	64889.055096397075	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	76	2634	25.0	-1370	False	AATAAA	-16
PB.9220.11	chr5	+	2926	26	full-splice_match	PARP8	ENST00000281631.9	7177	26	63	4188	-3	-7	multi-exon	FALSE	canonical	1	143991	junction_2	48713.488288973924	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	102	2660	30.0	-1309	False	AATAAA	-7
PB.7512.1	chr21	+	7689	37	novel_in_catalog	DOP1B	novel	623	4	NA	NA	-8	-107	combination_of_known_junctions	FALSE	canonical	1	24581	junction_1	37206.56693765585	NA	0	NA	TRUE	NA	NA	NA	B	coding	2298	6897	197	7093	20.0	-52	True	AGTAAA	-15
PB.667.1	chr1	-	3418	11	novel_not_in_catalog	SRGAP2B	novel	7120	10	NA	NA	196	1188	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	17	1	TRUE	NA	NA	NA	A	coding	306	921	1171	2091	65.0	NA	False	ATTAAA	-9
PB.9220.18	chr5	+	2814	24	novel_in_catalog	PARP8	novel	597	7	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	1	20629	junction_3	67825.27849774585	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	762	2585	25.0	-421	False	AATAAA	-16
PB.9220.19	chr5	+	3611	1	novel_in_catalog	PARP8	novel	597	7	NA	NA	0	1986	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-417	False	TTTAAA	-27
PB.3906.20	chr15	-	3675	9	incomplete-splice_match	ICE2	ENST00000558181.5	7060	16	46	31484	-1	-2	3prime_fragment	FALSE	canonical	1	66281	junction_6	66810.29767137324	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	456	1196	20.0	11	True	AATAAA	-14
PB.8525.4	chr3	-	3125	4	novel_not_in_catalog	NAALADL2-AS2	novel	1038	3	NA	NA	-3106	1946	any annotated donor/acceptor	FALSE	canonical	1	19907	junction_1	18331.574636857215	NA	7	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-8	False	AATAAA	-16
PB.11020.7	chr8	+	2186	13	full-splice_match	PPP3CC	ENST00000289963.12	2135	13	-52	1	-11	-1	multi-exon	FALSE	canonical	1	128861	junction_12	62944.32907251367	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	339	1847	30.0	-6	True	AATAAA	-37
PB.11169.1	chr8	-	3403	1	novel_in_catalog	SNHG6	novel	648	3	NA	NA	144	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	143	False	AATAAA	-9
PB.1240.13	chr1	-	5704	14	full-splice_match	HNRNPU	ENST00000444376.7	6827	14	20	1103	-2	-1100	multi-exon	FALSE	canonical	1	1037046	junction_1	1614879.0492050434	NA	1	NA	TRUE	NA	NA	NA	C	coding	806	2421	234	2654	40.0	1	True	GATAAA	-10
PB.11920.1	chr9	-	3780	12	novel_in_catalog	ANAPC2	novel	1972	3	NA	NA	-12	0	intron_retention	FALSE	canonical	1	213273	junction_11	85667.86942798669	NA	2	NA	TRUE	NA	NA	NA	C	coding	608	1827	1796	3622	0.0	-2	True	ATTAAA	-16
PB.10855.3	chr7	-	2058	9	novel_in_catalog	AKR1B1	novel	1409	10	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	18976	junction_6	556045.7207688586	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	1169	1687	10.0	0	True	AATAAA	-14
PB.2941.1	chr12	+	1974	3	full-splice_match	HSPB8	ENST00000281938.6	2152	3	177	1	177	-1	multi-exon	FALSE	canonical	1	625972	junction_1	22040.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	196	591	495	1085	10.0	-175	False	NA	NA
PB.10855.1	chr7	-	1387	10	full-splice_match	AKR1B1	ENST00000285930.8	1409	10	18	4	5	-4	multi-exon	FALSE	canonical	1	702870	junction_1	419760.3272304534	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	63	1013	5.0	-25	True	AATAAA	-17
PB.11196.1	chr8	-	2906	4	full-splice_match	PEX2	ENST00000357039.8	4317	4	148	1263	148	-1263	multi-exon	FALSE	canonical	1	414084	junction_3	42183.25592775724	NA	25	NA	TRUE	NA	NA	NA	C	coding	305	918	249	1166	75.0	-1	True	NA	NA
PB.10855.4	chr7	-	2685	8	novel_in_catalog	AKR1B1	novel	1409	10	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	702870	junction_1	418529.53803627426	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	1199	1558	10.0	38	False	AATAAA	-13
PB.11367.1	chr8	+	2599	4	full-splice_match	LY6E	ENST00000429120.6	1173	4	-2	-1424	-1	2	multi-exon	FALSE	canonical	1	583095	junction_1	1690635.020317185	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	159	554	15.0	-10	True	NA	NA
PB.11367.2	chr8	+	1136	4	full-splice_match	LY6E	ENST00000292494.10	1181	4	41	4	-5	-1	multi-exon	FALSE	canonical	1	1703446	junction_1	1210587.9798026523	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	122	517	10.0	-6	True	AATAAA	-15
PB.3457.26	chr14	+	2132	17	incomplete-splice_match	KTN1	ENST00000395314.7	4618	44	17	43393	10	3845	3prime_fragment	FALSE	canonical	1	252824	junction_1	314424.3552855696	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2079	52	2130	60.0	60	False	GATAAA	-39
PB.3226.7	chr13	+	1652	12	full-splice_match	DNAJC3	ENST00000602402.5	5591	12	4	3935	4	-789	multi-exon	FALSE	canonical	1	290585	junction_1	85317.8537928503	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	114	1628	50.0	-12	True	ATTAAA	-24
PB.8406.11	chr3	-	2773	20	full-splice_match	ACAD11	ENST00000264990.10	4142	20	831	538	-48	142	multi-exon	FALSE	canonical	1	100756	junction_6	46408.69951592054	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	142	2484	70.0	1052	False	NA	NA
PB.8406.10	chr3	-	3583	19	full-splice_match	ACAD11	ENST00000496418.5	3684	19	-443	544	-10	142	multi-exon	FALSE	canonical	1	115057	junction_6	42302.053659396595	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	342	2033	70.0	11	True	NA	NA
PB.8406.12	chr3	-	3433	19	full-splice_match	ACAD11	ENST00000496418.5	3684	19	-443	694	-10	-8	multi-exon	FALSE	canonical	1	115057	junction_6	42302.053659396595	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	342	2033	15.0	11	True	NA	NA
PB.9447.9	chr5	+	4751	19	full-splice_match	HSPA4	ENST00000304858.6	4825	19	72	2	72	-2	multi-exon	FALSE	canonical	1	746881	junction_1	385561.1102680237	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	218	2740	25.0	0	True	AATAAA	-21
PB.10841.1	chr7	+	2810	11	full-splice_match	CPA4	ENST00000647977.1	2817	11	6	1	6	-1	multi-exon	FALSE	canonical	1	114544	junction_1	21678.298606901786	NA	3	NA	TRUE	NA	NA	NA	A	coding	421	1266	42	1307	20.0	6	True	AATAAA	-18
PB.6383.1	chr2	-	2895	2	full-splice_match	CCDC121	ENST00000394775.3	1472	2	-132	-1291	2	1	multi-exon	FALSE	canonical	1	1285	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	248	1570	30.0	-11	True	AATAAA	-22
PB.11628.7	chr9	+	2696	22	novel_not_in_catalog	NAA35	novel	2649	23	NA	NA	4	-11	any annotated donor/acceptor	FALSE	canonical	1	2301	junction_2	103633.17170282983	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	387	2369	55.0	-418	False	AATAAA	-9
PB.6383.2	chr2	-	2343	2	full-splice_match	CCDC121	ENST00000324364.3	2342	2	-2	1	-2	-1	multi-exon	FALSE	canonical	1	16806	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	184	1020	30.0	-15	True	AATAAA	-20
PB.11093.9	chr8	-	2033	7	novel_not_in_catalog	PLPP5	novel	2185	6	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	6220	junction_5	146448.13751490094	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	113	727	50.0	25	True	AGTAAA	-11
PB.1371.7	chr10	-	4378	7	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	1	-295	any annotated donor/acceptor	FALSE	canonical	1	4070	junction_6	49734.62238387526	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	748	2118	30.0	-14	True	AATAAA	-14
PB.1371.6	chr10	-	3868	7	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	42	-295	any annotated donor/acceptor	FALSE	canonical	1	8967	junction_6	48544.29843766985	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	238	1608	30.0	62	False	AATAAA	-14
PB.1371.5	chr10	-	4107	6	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	130	-295	any annotated donor/acceptor	FALSE	canonical	1	8784	junction_5	44315.19529642174	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	477	1847	30.0	150	False	AATAAA	-14
PB.1371.4	chr10	-	3782	6	full-splice_match	ZNF25	ENST00000302609.7	4139	6	68	289	27	-289	multi-exon	FALSE	canonical	1	44453	junction_5	31624.494683709967	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	146	1516	25.0	47	False	AATAAA	-20
PB.1371.3	chr10	-	3856	6	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	12	-281	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	50910.86805545551	NA	3	1	TRUE	NA	NA	NA	C	coding	455	1368	215	1582	30.0	-3	True	AATAAA	-28
PB.1371.2	chr10	-	4131	6	full-splice_match	ZNF25	ENST00000302609.7	4139	6	6	2	0	-2	multi-exon	FALSE	canonical	1	44453	junction_5	31624.494683709967	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	208	1578	15.0	-15	True	AATAAA	-12
PB.1371.1	chr10	-	4230	7	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	14	4	any annotated donor/acceptor	TRUE	canonical	1	8967	junction_6	48544.29843766985	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	301	1671	10.0	-1	True	AATAAA	-18
PB.8873.2	chr4	-	2387	16	novel_in_catalog	ABCG2	novel	4276	16	NA	NA	4	-1897	combination_of_known_junctions	FALSE	canonical	1	19888	junction_15	25712.8283671789	NA	0	NA	TRUE	NA	NA	NA	B	coding	655	1968	352	2319	10.0	0	True	CATAAA	-31
PB.7931.4	chr3	+	2260	24	novel_in_catalog	FANCD2	novel	5219	43	NA	NA	1	-9	no_combination_of_known_junctions	FALSE	canonical	1	149	junction_18	73616.29655368283	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2166	93	2258	70.0	-25	True	NA	NA
PB.9447.3	chr5	+	3840	19	full-splice_match	HSPA4	ENST00000304858.6	4825	19	-13	998	-13	974	multi-exon	FALSE	canonical	1	746881	junction_1	385561.1102680237	NA	1	NA	TRUE	NA	NA	NA	C	coding	840	2523	303	2825	30.0	0	True	NA	NA
PB.1371.9	chr10	-	3199	7	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	-3	-14	any annotated donor/acceptor	FALSE	canonical	1	8967	junction_6	48544.29843766985	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	283	1653	70.0	17	True	NA	NA
PB.1371.8	chr10	-	3881	7	novel_not_in_catalog	ZNF25	novel	4139	6	NA	NA	-14	-295	any annotated donor/acceptor	FALSE	canonical	1	3106	junction_4	53862.83619425261	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	239	1621	30.0	6	True	AATAAA	-14
PB.6421.6	chr2	-	1882	2	full-splice_match	CDC42EP3	ENST00000295324.3	5700	2	521	3297	521	755	multi-exon	FALSE	canonical	1	329290	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	481	1245	35.0	-1	True	TTTAAA	-4
PB.6421.7	chr2	-	1387	2	full-splice_match	CDC42EP3	ENST00000295324.3	5700	2	549	3764	549	288	multi-exon	FALSE	canonical	1	329290	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	453	1217	80.0	-1	True	AAAACA	-7
PB.6421.4	chr2	-	2203	2	full-splice_match	CDC42EP3	ENST00000295324.3	5700	2	549	2948	549	1104	multi-exon	FALSE	canonical	1	329290	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	453	1217	30.0	-1	True	AATAAA	-18
PB.6421.5	chr2	-	1997	2	full-splice_match	CDC42EP3	ENST00000295324.3	5700	2	546	3157	546	895	multi-exon	FALSE	canonical	1	329290	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	456	1220	10.0	-4	True	NA	NA
PB.6421.2	chr2	-	3024	2	full-splice_match	CDC42EP3	ENST00000295324.3	5700	2	546	2130	546	1922	multi-exon	FALSE	canonical	1	329290	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	456	1220	85.0	-4	True	NA	NA
PB.9447.1	chr5	+	2585	19	full-splice_match	HSPA4	ENST00000304858.6	4825	19	269	1971	-10	1	multi-exon	FALSE	canonical	1	746881	junction_1	385561.1102680237	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	21	2543	20.0	-7579	False	ATTAAA	-20
PB.1181.1	chr1	-	3355	2	incomplete-splice_match	OBSCN-AS1	ENST00000337335.5	2893	4	19	5311	1	-5311	3prime_fragment	FALSE	canonical	1	6832	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	103	312	2239	2550	15.0	18	True	NA	NA
PB.6421.8	chr2	-	1173	1	novel_in_catalog	CDC42EP3	novel	5124	2	NA	NA	517	13981	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-5	True	NA	NA
PB.11280.13	chr8	-	3632	9	full-splice_match	RRM2B	ENST00000251810.7	4931	9	82	1217	82	-94	multi-exon	FALSE	canonical	1	165153	junction_8	46010.58837648134	NA	6	NA	TRUE	NA	NA	NA	C	coding	351	1056	163	1218	65.0	750	False	TTTAAA	-18
PB.9843.7	chr6	-	3757	3	full-splice_match	HCG18	ENST00000449544.5	4262	3	-39	544	0	-175	multi-exon	FALSE	canonical	1	17845	junction_2	84807.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	1240	1635	30.0	-1	True	ATTAAA	-17
PB.9843.6	chr6	-	4035	3	full-splice_match	HCG18	ENST00000426882.5	4862	3	283	544	-1	-175	multi-exon	FALSE	canonical	1	69067	junction_2	59196.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	1518	1913	30.0	-12	True	ATTAAA	-17
PB.9843.5	chr6	-	2375	5	full-splice_match	HCG18	ENST00000412685.6	2552	5	6	171	6	-171	multi-exon	FALSE	canonical	1	28091	junction_4	66626.94909484826	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-5	True	ATTAAA	-21
PB.9843.4	chr6	-	2331	4	full-splice_match	HCG18	ENST00000438412.5	2440	4	-482	591	-3	-10	multi-exon	FALSE	canonical	1	69067	junction_3	48572.111470129305	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-14	True	AATAAA	-13
PB.9843.3	chr6	-	2692	4	full-splice_match	HCG18	ENST00000438412.5	2440	4	-469	217	10	-5	multi-exon	FALSE	canonical	1	69067	junction_3	48572.111470129305	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	NA	NA
PB.9843.2	chr6	-	3160	5	full-splice_match	HCG18	ENST00000412685.6	2552	5	-27	-581	4	0	multi-exon	FALSE	canonical	1	28091	junction_4	66626.94909484826	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-38	True	AAAAAG	-3
PB.9843.1	chr6	-	2442	4	full-splice_match	HCG18	ENST00000438412.5	2440	4	-2	0	-2	0	multi-exon	FALSE	canonical	1	69067	junction_3	48572.111470129305	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-4	True	AAAAAG	-3
PB.7750.6	chr22	-	3581	10	full-splice_match	IL2RB	ENST00000216223.9	4113	10	74	458	74	-458	multi-exon	FALSE	canonical	1	134307	junction_4	21156.977614436753	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	126	1781	5.0	-1	True	AATAAA	-16
PB.9843.9	chr6	-	1775	4	novel_in_catalog	HCG17	novel	732	5	NA	NA	-726	-57511	no_combination_of_known_junctions	FALSE	canonical	1	3446	junction_1	76146.18272040227	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-5	True	ATTAAA	-17
PB.7750.1	chr22	-	3947	10	full-splice_match	IL2RB	ENST00000216223.9	4113	10	75	91	75	-91	multi-exon	FALSE	canonical	1	134307	junction_4	21156.977614436753	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	125	1780	45.0	0	True	NA	NA
PB.8514.5	chr3	+	2274	18	full-splice_match	PRKCI	ENST00000295797.4	4950	18	102	2574	102	242	multi-exon	FALSE	canonical	1	17512	junction_7	52011.94412997778	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	204	1994	75.0	4	True	AATGAA	-17
PB.8514.4	chr3	+	4849	18	full-splice_match	PRKCI	ENST00000295797.4	4950	18	99	2	99	-2	multi-exon	FALSE	canonical	1	17512	junction_7	52011.94412997778	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	207	1997	25.0	1	True	AATAAA	-17
PB.904.1	chr1	+	3868	1	incomplete-splice_match	POU2F1	ENST00000367866.6	13905	16	202640	9	33792	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	101	306	1205	1510	15.0	NA	False	ATTAAA	-17
PB.8514.1	chr3	+	2136	18	full-splice_match	PRKCI	ENST00000295797.4	4950	18	128	2686	128	130	multi-exon	FALSE	canonical	1	17512	junction_7	52011.94412997778	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	178	1968	65.0	14	True	NA	NA
PB.8514.3	chr3	+	2432	18	full-splice_match	PRKCI	ENST00000295797.4	4950	18	91	2427	91	389	multi-exon	FALSE	canonical	1	17512	junction_7	52011.94412997778	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	215	2005	35.0	-7	True	AATAAA	-18
PB.8514.2	chr3	+	3140	18	full-splice_match	PRKCI	ENST00000295797.4	4950	18	71	1739	71	1077	multi-exon	FALSE	canonical	1	17512	junction_7	52011.94412997778	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	235	2025	65.0	0	True	NA	NA
PB.5854.3	chr19	+	2183	8	full-splice_match	ARMC6	ENST00000269932.10	2412	8	239	-10	-12	-9	multi-exon	FALSE	canonical	1	79070	junction_1	154049.25196832343	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	212	1642	20.0	-55	False	AATAAA	-14
PB.6795.9	chr2	+	4146	24	novel_not_in_catalog	TANC1	novel	7470	27	NA	NA	-30	-6879	any annotated donor/acceptor	FALSE	canonical	1	18993	junction_9	31205.796337153726	NA	0	NA	TRUE	NA	NA	NA	C	coding	1293	3879	268	4146	25.0	0	True	NA	NA
PB.5854.2	chr19	+	2095	8	full-splice_match	ARMC6	ENST00000392335.6	2383	8	286	2	0	-2	multi-exon	FALSE	canonical	1	132496	junction_1	136269.0595232349	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	117	1547	15.0	-43	True	AATAAA	-21
PB.8463.4	chr3	+	1549	10	full-splice_match	RNF13	ENST00000392894.7	2843	10	509	785	2	-20	multi-exon	FALSE	canonical	1	141018	junction_5	126126.71566452917	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	154	1299	90.0	2	True	AATGAA	-10
PB.11563.2	chr9	-	2457	14	novel_in_catalog	CBWD6	novel	1820	16	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_4	29278.432176232127	NA	1	NA	TRUE	NA	NA	NA	B	coding	113	342	86	427	30.0	NA	False	AATAAA	-21
PB.11563.3	chr9	-	1331	3	incomplete-splice_match	CBWD6	ENST00000617933.1	721	7	70	10759	-2	-10759	3prime_fragment	FALSE	canonical	1	6508	junction_1	1553.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	113	342	109	450	25.0	NA	False	AATAAA	-18
PB.11563.1	chr9	-	1732	15	novel_in_catalog	CBWD6	novel	1820	16	NA	NA	10	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	28346.37692646351	NA	9	1	TRUE	NA	NA	NA	B	coding	160	483	72	554	25.0	NA	False	AATAAA	-36
PB.9460.6	chr5	+	3597	23	full-splice_match	DDX46	ENST00000452510.6	5689	23	0	2092	0	7	multi-exon	FALSE	non_canonical	0	0	junction_19	169254.55462455662	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	159	3257	20.0	2	True	AATAAA	-22
PB.1365.1	chr10	-	2276	16	incomplete-splice_match	PARD3	ENST00000340077.9	3518	21	364979	4952	-23615	-4948	internal_fragment	FALSE	canonical	1	149139	junction_8	67808.433841882	NA	1	1	TRUE	NA	NA	NA	A	coding	716	2148	127	2274	65.0	NA	False	AATGAA	-34
PB.9460.4	chr5	+	3760	23	full-splice_match	DDX46	ENST00000452510.6	5689	23	-4	1933	-2	-91	multi-exon	FALSE	non_canonical	0	0	junction_19	169254.55462455662	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	163	3261	20.0	-2	True	AATAGA	-18
PB.9460.5	chr5	+	3359	23	full-splice_match	DDX46	ENST00000452510.6	5689	23	-2	2332	0	-233	multi-exon	FALSE	non_canonical	0	0	junction_19	169254.55462455662	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	161	3259	15.0	0	True	AATGAA	-15
PB.5025.7	chr17	-	2079	3	full-splice_match	DUSP3	ENST00000226004.7	4110	3	12	2019	12	246	multi-exon	FALSE	canonical	1	386088	junction_2	98327.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	53	610	40.0	-32	True	AGTAAA	-16
PB.10371.4	chr7	-	3826	13	novel_in_catalog	BRAT1	novel	2915	14	NA	NA	170	24	intron_retention	FALSE	canonical	1	152012	junction_12	100712.86762909885	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	55	1467	25.0	-1	True	AATAAA	-21
PB.5025.5	chr17	-	3693	3	full-splice_match	DUSP3	ENST00000226004.7	4110	3	26	391	26	0	multi-exon	FALSE	canonical	1	386088	junction_2	98327.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	39	596	85.0	-18	True	TTTAAA	-3
PB.5025.4	chr17	-	4156	4	novel_in_catalog	DUSP3	novel	4110	3	NA	NA	22	3	intron_retention	FALSE	canonical	1	4430	junction_1	177756.79122953984	NA	3	NA	TRUE	NA	NA	NA	C	coding	210	633	43	675	20.0	-22	True	AATAAA	-14
PB.5178.1	chr17	+	2058	11	novel_not_in_catalog	PSMC5	novel	558	5	NA	NA	-22	0	any annotated donor/acceptor	FALSE	canonical	1	11682	junction_5	840925.3278121965	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	1475	2008	15.0	-49	True	AATAAA	-18
PB.5178.2	chr17	+	1331	12	full-splice_match	PSMC5	ENST00000310144.10	1579	12	248	0	-2	0	multi-exon	FALSE	canonical	1	1400876	junction_1	510187.48841240903	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	61	1281	15.0	-29	True	AATAAA	-18
PB.5178.3	chr17	+	3237	10	novel_in_catalog	PSMC5	novel	558	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1629821	junction_9	435477.6206835688	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	2036	3187	15.0	-28	True	AATAAA	-18
PB.5178.4	chr17	+	1946	11	full-splice_match	PSMC5	ENST00000581882.5	1474	11	-439	-33	6	0	multi-exon	FALSE	canonical	1	1629821	junction_10	418367.21291688236	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	700	1896	15.0	-21	True	AATAAA	-18
PB.10436.1	chr7	-	4414	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	10	-174	-2	174	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	348	2087	35.0	-1	True	NA	NA
PB.28.1	chr1	-	5980	9	full-splice_match	SLC35E2B	ENST00000611123.1	5948	9	-10	-22	-10	21	multi-exon	FALSE	canonical	1	23888	junction_6	123377.45343837139	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	438	1655	15.0	-6268	False	AATAAA	-35
PB.3227.9	chr13	-	3127	25	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-5	89189	-5	-13867	3prime_fragment	FALSE	canonical	1	66236	junction_10	29534.194325767923	NA	0	NA	TRUE	NA	NA	NA	C	coding	988	2967	77	3043	30.0	6	True	AATATA	-20
PB.3227.8	chr13	-	3606	25	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-26	88731	-9	-13409	3prime_fragment	FALSE	canonical	1	66236	junction_10	29534.194325767923	NA	0	NA	TRUE	NA	NA	NA	C	coding	988	2967	98	3064	5.0	-15	True	NA	NA
PB.3227.5	chr13	-	3755	32	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-23	59287	-6	2567	3prime_fragment	FALSE	canonical	1	66236	junction_17	26607.341743816058	NA	1	NA	TRUE	NA	NA	NA	C	coding	1220	3660	95	3754	75.0	-12	True	AAGAAA	-42
PB.3227.4	chr13	-	4488	37	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-16	35506	1	17366	3prime_fragment	FALSE	canonical	1	66236	junction_22	28990.93929862685	NA	2	1	TRUE	NA	NA	NA	C	coding	1467	4401	88	4488	10.0	-5	True	AAAACA	-10
PB.3227.7	chr13	-	3655	30	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-24	65757	-7	2	3prime_fragment	FALSE	canonical	1	66236	junction_15	27285.28853141503	NA	0	NA	TRUE	NA	NA	NA	C	coding	1186	3558	96	3653	20.0	-13	True	ATTAAA	-34
PB.3227.6	chr13	-	3708	31	incomplete-splice_match	UGGT2	ENST00000376747.7	4832	39	-27	62083	-10	-229	3prime_fragment	FALSE	canonical	1	66236	junction_16	26979.153911533667	NA	0	NA	TRUE	NA	NA	NA	C	coding	1203	3609	99	3707	55.0	-16	True	AAAAAG	-43
PB.3227.1	chr13	-	4856	39	full-splice_match	UGGT2	ENST00000376747.7	4832	39	-28	4	-11	-4	multi-exon	TRUE	canonical	1	66236	junction_24	34767.73349384697	NA	0	NA	TRUE	NA	NA	NA	C	coding	1516	4551	100	4650	25.0	-17	True	AATAAA	-17
PB.3227.3	chr13	-	5462	39	novel_not_in_catalog	UGGT2	novel	4832	39	NA	NA	-2	-13674	any annotated donor/acceptor	FALSE	canonical	1	27006	junction_1	34929.58865923054	NA	0	NA	TRUE	NA	NA	NA	C	coding	1563	4692	84	4775	25.0	-1	True	NA	NA
PB.3227.2	chr13	-	4724	38	novel_in_catalog	UGGT2	novel	4832	39	NA	NA	-11	-4	no_combination_of_known_junctions	FALSE	canonical	1	4475	junction_17	38501.96450176603	NA	0	NA	TRUE	NA	NA	NA	C	coding	1472	4419	100	4518	25.0	-17	True	AATAAA	-17
PB.9853.1	chr6	-	3384	3	full-splice_match	PPP1R18	ENST00000615527.1	4597	3	1213	0	476	0	multi-exon	FALSE	canonical	1	631963	junction_1	78552.5	NA	79	1	TRUE	NA	NA	NA	C	coding	613	1842	665	2506	10.0	-38	True	AATAAA	-15
PB.9853.4	chr6	-	2842	4	full-splice_match	PPP1R18	ENST00000399199.7	2853	4	9	2	9	0	multi-exon	FALSE	canonical	1	111539	junction_3	289553.03997751814	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	123	1964	10.0	-1	True	AATAAA	-15
PB.9870.1	chr6	-	1526	11	full-splice_match	DDX39B	ENST00000458640.5	2003	11	440	37	-5	-13	multi-exon	FALSE	canonical	1	1163204	junction_10	915268.2722861095	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	62	1348	55.0	-6	True	NA	NA
PB.9870.3	chr6	-	3974	10	full-splice_match	DDX39B	ENST00000462256.5	4027	10	16	37	0	-13	multi-exon	FALSE	canonical	1	1163204	junction_9	864899.6661260702	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	55	927	55.0	1	True	NA	NA
PB.9870.2	chr6	-	4111	10	novel_in_catalog	DDX39B	novel	974	4	NA	NA	-5	-13	intron_retention	FALSE	canonical	1	855812	junction_9	941804.5789617314	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	192	1064	55.0	-6	True	NA	NA
PB.9870.7	chr6	-	2394	11	novel_in_catalog	DDX39B	novel	974	4	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	1	25454	junction_5	1225705.6208970407	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	55	927	70.0	1	True	NA	NA
PB.9870.6	chr6	-	5348	9	novel_in_catalog	DDX39B	novel	974	4	NA	NA	-4	-19	intron_retention	FALSE	canonical	1	1163204	junction_8	891381.1602992064	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	61	933	70.0	-5	True	NA	NA
PB.28.7	chr1	-	3030	9	full-splice_match	SLC35E2B	ENST00000611123.1	5948	9	102	2816	18	-513	multi-exon	FALSE	canonical	1	23888	junction_6	123377.45343837139	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	326	1543	50.0	-6156	False	GATAAA	-10
PB.3669.21	chr14	+	2828	19	incomplete-splice_match	DYNC1H1	ENST00000645149.1	6050	39	21931	-7	-355	-1	5prime_fragment	FALSE	canonical	1	1116228	junction_2	369526.25979781675	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	30	2600	5.0	NA	False	AATAAA	-13
PB.6660.5	chr2	-	3472	18	incomplete-splice_match	TBC1D8	ENST00000376840.8	3627	20	-184	3418	-53	5	3prime_fragment	FALSE	canonical	1	65787	junction_17	42293.08917190162	NA	4	NA	TRUE	NA	NA	NA	C	coding	1004	3015	185	3199	20.0	-9	True	ATTAAA	-20
PB.6660.4	chr2	-	3127	19	incomplete-splice_match	TBC1D8	ENST00000376840.8	3627	20	-202	3357	-71	66	3prime_fragment	FALSE	canonical	1	65787	junction_18	43946.415067066766	NA	1	NA	TRUE	NA	NA	NA	C	coding	975	2925	203	3127	70.0	-27	False	NA	NA
PB.11275.26	chr8	-	3048	7	full-splice_match	YWHAZ	ENST00000395957.6	5248	7	1	2199	1	-38	multi-exon	FALSE	canonical	1	9976	junction_2	795380.5754047171	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	342	1079	30.0	12	True	NA	NA
PB.6660.1	chr2	-	5505	20	full-splice_match	TBC1D8	ENST00000376840.8	3627	20	-194	-1684	-63	1684	multi-exon	FALSE	canonical	1	65787	junction_19	43427.72533806925	NA	0	NA	TRUE	NA	NA	NA	C	coding	1140	3423	195	3617	30.0	-19	True	AATAAA	-19
PB.5031.1	chr17	+	1439	6	full-splice_match	G6PC3	ENST00000269097.8	1533	6	132	-38	-25	-2	multi-exon	TRUE	canonical	1	542160	junction_1	189492.10882356027	NA	1	NA	TRUE	NA	NA	NA	A	coding	346	1041	100	1140	15.0	-45	True	AATAAA	-16
PB.6660.3	chr2	-	4199	20	full-splice_match	TBC1D8	ENST00000376840.8	3627	20	-184	-388	-53	388	multi-exon	FALSE	canonical	1	65787	junction_19	43427.72533806925	NA	1	NA	TRUE	NA	NA	NA	C	coding	1140	3423	185	3607	10.0	-9	True	AAGAAA	-13
PB.6660.2	chr2	-	4247	20	full-splice_match	TBC1D8	ENST00000409318.1	3803	20	-56	-388	-56	388	multi-exon	FALSE	canonical	1	14548	junction_18	51954.463293880006	NA	1	NA	TRUE	NA	NA	NA	C	coding	1155	3468	188	3655	10.0	-12	True	AAGAAA	-13
PB.10436.4	chr7	-	4001	12	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-25	-2	no_combination_of_known_junctions	FALSE	canonical	1	2254	junction_10	42122.371180107024	NA	3	NA	TRUE	NA	NA	NA	C	coding	524	1575	276	1850	15.0	21	True	AATAAA	-20
PB.28.6	chr1	-	3568	8	novel_in_catalog	SLC35E2B	novel	2156	7	NA	NA	-67	-505	intron_retention	FALSE	canonical	1	23888	junction_5	131088.8395859846	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	495	1259	40.0	-6325	False	GATAAA	-18
PB.5549.7	chr19	+	5011	13	novel_in_catalog	PTBP1	novel	3598	15	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1080248	junction_5	663198.4134775862	NA	49	4	TRUE	NA	NA	NA	C	coding	428	1287	83	1369	0.0	1	True	AATAAA	-15
PB.11260.2	chr8	+	1499	3	full-splice_match	ERICH5	ENST00000318528.7	1761	3	257	5	46	-5	multi-exon	FALSE	canonical	1	30570	junction_1	13655.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	103	1227	25.0	0	True	AATAAA	-15
PB.5192.1	chr17	+	1401	1	antisense	novelGene_GNA13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	AATAAA	-28
PB.11260.1	chr8	+	2627	3	full-splice_match	ERICH5	ENST00000318528.7	1761	3	235	-1101	24	1101	multi-exon	FALSE	canonical	1	30570	junction_1	13655.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	125	1249	10.0	0	True	AATAAA	-23
PB.1195.3	chr1	+	2566	17	full-splice_match	GNPAT	ENST00000644483.1	2685	17	-21	140	-12	-140	multi-exon	FALSE	canonical	1	7114	junction_2	197324.155320699	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	600	2315	45.0	-156	False	AATAAA	-20
PB.946.1	chr1	-	2621	1	incomplete-splice_match	RC3H1	ENST00000258349.8	10988	19	59228	2	7613	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	3680	False	ATTAAA	-17
PB.1195.2	chr1	+	2561	16	full-splice_match	GNPAT	ENST00000366647.8	2643	16	-3	85	0	-45	multi-exon	FALSE	canonical	1	306069	junction_2	113931.2393015288	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	173	2215	45.0	-5	True	ATTAAA	-40
PB.10371.8	chr7	-	2718	14	novel_not_in_catalog	BRAT1	novel	2915	14	NA	NA	158	24	any annotated donor/acceptor	FALSE	canonical	1	8466	junction_9	134236.7584842798	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	67	2502	25.0	180	False	AATAAA	-21
PB.10623.1	chr7	-	1250	9	full-splice_match	STYXL1	ENST00000431581.5	1147	9	-37	-66	-2	-1	multi-exon	TRUE	canonical	1	102322	junction_8	114791.91452192691	NA	0	NA	TRUE	NA	NA	NA	A	coding	313	942	184	1125	20.0	9	True	NA	NA
PB.7728.7	chr22	+	1886	6	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	2	-2468	any annotated donor/acceptor	TRUE	canonical	1	1846	junction_1	740975.0315508883	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	251	688	15.0	-2	True	ATTAAA	-22
PB.7728.6	chr22	+	1962	5	full-splice_match	TIMP3	ENST00000266085.6	4603	5	163	2478	163	-2478	multi-exon	FALSE	canonical	1	1212590	junction_1	339747.4843387365	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	139	774	25.0	-9452	False	ATTAAA	-12
PB.7728.5	chr22	+	2475	6	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	2	-1879	any annotated donor/acceptor	FALSE	canonical	1	1846	junction_1	740975.0315508883	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	251	688	80.0	-2	True	NA	NA
PB.7728.4	chr22	+	2282	5	full-splice_match	TIMP3	ENST00000266085.6	4603	5	267	2054	267	-2054	multi-exon	FALSE	canonical	1	1212590	junction_1	339747.4843387365	NA	2	NA	TRUE	NA	NA	NA	C	coding	211	636	35	670	40.0	-9348	False	AATAAA	-22
PB.7728.3	chr22	+	3430	5	full-splice_match	TIMP3	ENST00000266085.6	4603	5	2	1171	2	-1171	multi-exon	FALSE	canonical	1	1212590	junction_1	339747.4843387365	NA	6	NA	TRUE	NA	NA	NA	C	coding	211	636	300	935	25.0	-2	True	NA	NA
PB.7728.2	chr22	+	4353	6	novel_not_in_catalog	TIMP3	novel	4603	5	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	1846	junction_1	740975.0315508883	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	251	688	5.0	-2	True	AGTAAA	-22
PB.1397.9	chr10	-	3371	9	novel_in_catalog	NCOA4	novel	3489	10	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	522	1868	10.0	-17	True	ATTAAA	-15
PB.1397.8	chr10	-	3450	11	novel_not_in_catalog	NCOA4	novel	3489	10	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	coding	614	1845	103	1947	10.0	4	True	ATTAAA	-15
PB.1397.7	chr10	-	3680	9	novel_in_catalog	NCOA4	novel	3489	10	NA	NA	-45	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	831	2177	10.0	-1	True	ATTAAA	-15
PB.1195.7	chr1	+	2154	9	incomplete-splice_match	GNPAT	ENST00000366647.8	2643	16	0	9364	0	-1447	3prime_fragment	FALSE	canonical	1	306069	junction_2	85076.65253969138	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	170	1456	80.0	-2	True	NA	NA
PB.8463.9	chr3	+	1481	9	novel_in_catalog	RNF13	novel	2843	10	NA	NA	0	-20	combination_of_known_junctions	TRUE	canonical	1	4530	junction_5	153718.9986680241	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	167	1231	90.0	-11	True	AATGAA	-10
PB.1397.4	chr10	-	3218	8	full-splice_match	NCOA4	ENST00000585056.5	2124	8	-8	-1086	-8	1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	169	1713	15.0	-17	True	ATTAAA	-17
PB.1397.3	chr10	-	3327	10	novel_not_in_catalog	NCOA4	novel	3489	10	NA	NA	-9	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	114	1841	15.0	-18	True	ATTAAA	-17
PB.1397.1	chr10	-	3662	10	full-splice_match	NCOA4	ENST00000581486.5	3549	10	115	-228	-7	225	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	89	1933	25.0	7	True	ATTAAA	-24
PB.7728.8	chr22	+	4349	5	full-splice_match	TIMP3	ENST00000266085.6	4603	5	251	3	251	-3	multi-exon	FALSE	canonical	1	1212590	junction_1	339747.4843387365	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	51	686	10.0	-9364	False	AGTAAA	-20
PB.10124.2	chr6	-	3920	11	full-splice_match	PNISR	ENST00000478777.5	2422	11	-7	-1491	-7	5	multi-exon	FALSE	canonical	1	597170	junction_9	188989.52115458675	NA	3	NA	TRUE	NA	NA	NA	C	coding	413	1242	213	1454	30.0	-8	True	AATAAA	-19
PB.10124.3	chr6	-	4065	10	novel_in_catalog	PNISR	novel	5189	13	NA	NA	0	524	intron_retention	FALSE	canonical	1	597170	junction_8	191877.15814899214	NA	4	NA	TRUE	NA	NA	NA	C	coding	413	1242	206	1447	70.0	-1	True	NA	NA
PB.10124.1	chr6	-	3163	12	full-splice_match	PNISR	ENST00000369239.9	5112	12	31	1918	0	-5	multi-exon	FALSE	canonical	1	597170	junction_10	186128.88172069116	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	175	2592	30.0	30	True	AATAAA	-20
PB.10124.6	chr6	-	2938	11	full-splice_match	PNISR	ENST00000478777.5	2422	11	18	-534	-13	533	multi-exon	FALSE	canonical	1	597170	junction_9	188989.52115458675	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	188	1429	75.0	17	True	NA	NA
PB.10124.7	chr6	-	2221	12	full-splice_match	PNISR	ENST00000369239.9	5112	12	6	2885	6	524	multi-exon	FALSE	canonical	1	597170	junction_10	186128.88172069116	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2022	200	2221	70.0	5	True	NA	NA
PB.10124.4	chr6	-	4010	9	novel_in_catalog	PNISR	novel	5189	13	NA	NA	-11	569	intron_retention	FALSE	canonical	1	151384	junction_8	321223.34018247237	NA	7	NA	TRUE	NA	NA	NA	C	coding	413	1242	106	1347	80.0	19	True	NA	NA
PB.9365.9	chr5	-	3066	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-16	3253	-16	-3253	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	3	NA	TRUE	NA	NA	NA	C	coding	359	1080	328	1407	45.0	-20	True	AATAAA	-25
PB.7111.15	chr2	-	4681	29	novel_not_in_catalog	HDLBP	novel	6372	28	NA	NA	-25	-3	any annotated donor/acceptor	FALSE	canonical	1	99	junction_28	984716.3883483871	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	489	4295	15.0	-4	True	AATAAA	-23
PB.7111.14	chr2	-	4712	29	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	17271	junction_28	979238.1520701743	NA	1	NA	TRUE	NA	NA	NA	C	coding	1268	3807	520	4326	15.0	-2	True	AATAAA	-23
PB.10124.8	chr6	-	2254	12	novel_not_in_catalog	PNISR	novel	5189	13	NA	NA	2	569	any annotated donor/acceptor	FALSE	canonical	1	13857	junction_8	321240.70925675833	NA	2	NA	TRUE	NA	NA	NA	C	coding	676	2028	227	2254	80.0	-22	False	NA	NA
PB.10124.9	chr6	-	2197	11	full-splice_match	PNISR	ENST00000438806.5	3142	11	18	927	-5	569	multi-exon	FALSE	canonical	1	151384	junction_10	291752.9171206519	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	131	2197	80.0	-6	True	NA	NA
PB.11055.1	chr8	-	1830	8	full-splice_match	PBK	ENST00000301905.8	2118	8	285	3	-1	-3	multi-exon	FALSE	canonical	1	269885	junction_7	74304.52541468818	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	180	1148	25.0	6	True	AATAAA	-45
PB.586.8	chr1	-	2277	13	novel_in_catalog	AL449266.1	novel	557	6	NA	NA	-15	-92280	no_combination_of_known_junctions	FALSE	canonical	1	5165	junction_1	119554.92798349587	NA	0	NA	TRUE	NA	NA	NA	B	coding	551	1656	312	1967	15.0	-47	True	AATAAA	-12
PB.11022.1	chr8	+	1883	10	full-splice_match	PDLIM2	ENST00000397760.8	1847	10	-44	8	-44	0	multi-exon	TRUE	canonical	1	67120	junction_1	200805.22252492327	NA	0	NA	TRUE	NA	NA	NA	A	coding	352	1059	445	1503	45.0	-9950	False	TATAAA	-16
PB.28.4	chr1	-	5195	10	novel_not_in_catalog	SLC35E2B	novel	2156	7	NA	NA	-44	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	132185.17090229574	NA	3	NA	TRUE	NA	NA	NA	C	coding	405	1218	472	1689	5.0	-6302	False	AATAAA	-13
PB.11831.1	chr9	+	3852	12	full-splice_match	TBC1D13	ENST00000372648.9	3906	12	52	2	-14	-2	multi-exon	FALSE	canonical	1	163873	junction_2	42404.53602841474	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	99	1301	15.0	-44	True	AATAAA	-22
PB.7754.1	chr22	+	3952	13	novel_in_catalog	CYTH4	novel	652	6	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	5817	junction_6	67891.07479443123	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	1424	2119	5.0	-35	True	AATAAA	-17
PB.11137.7	chr8	+	2006	8	incomplete-splice_match	TGS1	ENST00000260129.5	3782	13	320	26226	-8	222	3prime_fragment	FALSE	canonical	1	193401	junction_7	40329.520548519664	NA	4	NA	TRUE	NA	NA	NA	C	coding	616	1848	158	2005	40.0	-8	True	NA	NA
PB.7113.11	chr2	-	2034	12	novel_in_catalog	STK25	novel	4619	12	NA	NA	0	-51	combination_of_known_junctions	FALSE	canonical	1	50552	junction_9	452924.2390581052	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	415	1473	40.0	-1	True	AAGAAA	-20
PB.7113.10	chr2	-	2076	11	full-splice_match	STK25	ENST00000535007.5	2459	11	72	311	1	-1	multi-exon	FALSE	canonical	1	51501	junction_10	388776.1090350203	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	434	1432	10.0	69	False	AATAAA	-17
PB.9365.2	chr5	-	6055	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-16	264	-16	-264	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	7	NA	TRUE	NA	NA	NA	C	coding	359	1080	328	1407	20.0	-20	True	AATAAA	-22
PB.10060.3	chr6	-	2277	6	novel_not_in_catalog	CGAS	novel	1917	6	NA	NA	-20	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	47506.12713324461	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	116	1684	20.0	-21	True	AATAAA	-17
PB.11152.17	chr8	-	4599	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-13	-674	no_combination_of_known_junctions	FALSE	canonical	1	54781	junction_12	827015.9115541736	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	239	2470	20.0	-3	True	AATAAA	-17
PB.10060.2	chr6	-	3200	5	full-splice_match	CGAS	ENST00000370315.3	3182	5	-20	2	-20	-2	multi-exon	FALSE	canonical	1	105895	junction_4	9282.476110930747	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	116	1684	20.0	-21	True	AATAAA	-17
PB.9365.4	chr5	-	5564	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	4	735	4	-735	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	4	NA	TRUE	NA	NA	NA	C	coding	359	1080	308	1387	30.0	0	True	NA	NA
PB.10060.1	chr6	-	2203	6	novel_not_in_catalog	CGAS	novel	1917	6	NA	NA	-52	2	any annotated donor/acceptor	FALSE	canonical	1	17	junction_1	47499.43180123316	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	148	1641	15.0	-1	True	AATAAA	-21
PB.6512.9	chr2	+	3506	7	novel_in_catalog	ACTR2	novel	3861	9	NA	NA	-7	-3	no_combination_of_known_junctions	FALSE	canonical	1	1606	junction_6	378143.477996558	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	85	990	25.0	-5	True	AATAAA	-19
PB.9365.6	chr5	-	3578	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	3	2722	3	-2722	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	3	NA	TRUE	NA	NA	NA	C	coding	359	1080	309	1388	35.0	-1	True	AATAAA	-22
PB.10116.1	chr6	+	2388	1	genic	UFL1	novel	NA	NA	NA	NA	-28	1203	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	121	366	95	460	85.0	-1426	False	NA	NA
PB.10116.3	chr6	+	4189	19	full-splice_match	UFL1	ENST00000369278.4	4224	19	33	2	33	-2	multi-exon	FALSE	canonical	1	148931	junction_1	48429.79125066857	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	34	2418	35.0	2	True	AATAAA	-17
PB.10116.2	chr6	+	1396	12	incomplete-splice_match	UFL1	ENST00000369278.4	4224	19	-1	12333	-1	-12333	3prime_fragment	FALSE	canonical	1	148931	junction_1	50295.138478898436	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1329	68	1396	70.0	-32	True	NA	NA
PB.10116.5	chr6	+	1274	11	incomplete-splice_match	UFL1	ENST00000369278.4	4224	19	31	14661	31	-14661	3prime_fragment	FALSE	canonical	1	148931	junction_1	52743.44554349858	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1239	36	1274	70.0	0	True	NA	NA
PB.10116.4	chr6	+	2965	19	full-splice_match	UFL1	ENST00000369278.4	4224	19	15	1244	15	-1244	multi-exon	TRUE	canonical	1	148931	junction_1	48429.79125066857	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	52	2436	65.0	-16	True	AATACA	-10
PB.10060.6	chr6	-	1644	5	full-splice_match	CGAS	ENST00000370315.3	3182	5	-18	1556	-18	-1556	multi-exon	FALSE	canonical	1	105895	junction_4	9282.476110930747	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1530	114	1643	50.0	-19	True	NA	NA
PB.3114.8	chr13	+	3917	5	incomplete-splice_match	UFM1	ENST00000239878.8	3138	6	-22	620	8	-620	intron_retention	FALSE	canonical	1	242647	junction_4	185448.4404254994	NA	1	NA	TRUE	NA	NA	NA	C	coding	80	243	62	304	25.0	5	True	AATACA	-14
PB.3114.9	chr13	+	2610	7	novel_not_in_catalog	UFM1	novel	777	3	NA	NA	0	-619	any annotated donor/acceptor	FALSE	canonical	1	851	junction_3	254266.45381283693	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	AATACA	-15
PB.265.1	chr1	-	2650	10	novel_not_in_catalog	RNF19B	novel	2560	9	NA	NA	-200	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	133261.63295016016	NA	14	1	TRUE	NA	NA	NA	A	coding	682	2049	247	2295	20.0	4	True	AATAAA	-18
PB.10060.5	chr6	-	2503	6	novel_not_in_catalog	CGAS	novel	1917	6	NA	NA	-20	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	47506.12713324461	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	116	1684	15.0	-21	True	AATAAA	-16
PB.3100.13	chr13	-	2562	8	incomplete-splice_match	STARD13	ENST00000399365.7	5784	14	16	14617	16	-6003	3prime_fragment	FALSE	canonical	1	16944	junction_7	26142.16323122789	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	358	2298	70.0	-1	True	AATACA	-6
PB.3100.12	chr13	-	2734	8	incomplete-splice_match	STARD13	ENST00000399365.7	5784	14	3	14458	3	-5844	3prime_fragment	FALSE	canonical	1	16944	junction_7	26142.16323122789	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	371	2311	35.0	20	True	AATAAA	-14
PB.3100.11	chr13	-	3792	14	full-splice_match	STARD13	ENST00000336934.9	5917	14	12	2113	-7	-2078	multi-exon	FALSE	canonical	1	40553	junction_13	20398.41391473088	NA	4	NA	TRUE	NA	NA	NA	C	coding	1113	3342	106	3447	25.0	-16	True	NA	NA
PB.3114.3	chr13	+	3219	6	novel_not_in_catalog	UFM1	novel	777	3	NA	NA	0	-619	any annotated donor/acceptor	FALSE	canonical	1	83956	junction_5	215746.30442684295	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	AATACA	-15
PB.3114.4	chr13	+	1796	5	incomplete-splice_match	UFM1	ENST00000239878.8	3138	6	-53	2772	-21	-278	intron_retention	FALSE	canonical	1	242647	junction_4	185448.4404254994	NA	0	NA	TRUE	NA	NA	NA	C	coding	80	243	93	335	45.0	-26	True	AATAAA	-30
PB.3114.5	chr13	+	2648	5	novel_in_catalog	UFM1	novel	777	3	NA	NA	-20	-619	intron_retention	FALSE	canonical	1	200548	junction_4	104969.15690573113	NA	15	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-25	True	AATACA	-15
PB.3114.6	chr13	+	2366	6	full-splice_match	UFM1	ENST00000239878.8	3138	6	-52	824	-20	-824	multi-exon	FALSE	canonical	1	200548	junction_5	189349.48621572755	NA	1	NA	TRUE	NA	NA	NA	C	coding	85	258	92	349	45.0	-25	True	AATAAA	-21
PB.3114.7	chr13	+	2418	6	full-splice_match	UFM1	ENST00000239878.8	3138	6	2	718	2	-718	multi-exon	FALSE	canonical	1	200548	junction_5	189349.48621572755	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	29	True	ATTAAA	-37
PB.6431.1	chr2	-	3627	20	novel_not_in_catalog	SOS1	novel	8517	24	NA	NA	45	861	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	68991.62927181055	NA	0	NA	TRUE	NA	NA	NA	B	coding	1035	3108	105	3212	25.0	28	True	AATAAA	-20
PB.11230.6	chr8	-	2285	7	full-splice_match	PIP4P2	ENST00000285419.7	2970	7	205	480	-8	-480	multi-exon	FALSE	canonical	1	212716	junction_6	29898.726266069152	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	111	884	35.0	-11	True	AATAAA	-12
PB.9700.1	chr6	-	2482	3	antisense	novelGene_NQO2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	205	618	331	948	50.0	-64	True	NA	NA
PB.5478.1	chr18	-	4289	28	novel_not_in_catalog	AC090227.1	novel	936	7	NA	NA	-121587	-30466	any annotated donor/acceptor	TRUE	canonical	1	610	junction_27	27024.508808338436	NA	0	NA	TRUE	NA	NA	NA	B	coding	1280	3843	235	4077	30.0	NA	False	AATAAA	-17
PB.8470.8	chr3	+	3067	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	12	390	9	-390	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	238	651	25.0	-21	True	AATAAA	-19
PB.5478.3	chr18	-	5998	39	novel_not_in_catalog	AC090227.1	novel	936	7	NA	NA	-357566	-30467	any annotated donor/acceptor	TRUE	canonical	1	5477	junction_11	24534.096124314816	NA	0	NA	TRUE	NA	NA	NA	B	coding	1796	5391	397	5787	30.0	4340	False	AATAAA	-16
PB.5478.2	chr18	-	6080	39	novel_in_catalog	AC090227.1	novel	936	7	NA	NA	-357570	-30467	no_combination_of_known_junctions	FALSE	canonical	1	33378	junction_38	21086.204196230407	NA	1	NA	TRUE	NA	NA	NA	B	coding	1822	5469	401	5869	30.0	4336	False	AATAAA	-16
PB.11399.3	chr8	+	2168	5	full-splice_match	SLC52A2	ENST00000643944.1	2158	5	-12	2	5	0	multi-exon	FALSE	canonical	1	381067	junction_1	89583.11444232948	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	576	1913	30.0	-12	True	AATAAA	-13
PB.7931.8	chr3	+	3596	28	novel_not_in_catalog	FANCD2	novel	5219	43	NA	NA	18	-9	any annotated donor/acceptor	FALSE	canonical	1	149	junction_22	76414.54594837669	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1428	2167	3594	70.0	7	True	NA	NA
PB.3242.9	chr13	-	2171	14	novel_in_catalog	TMTC4	novel	3483	18	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	18960	junction_9	46319.55575445365	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	963	2150	30.0	-84	False	AATAAA	-18
PB.6682.6	chr2	+	2263	14	novel_in_catalog	CCDC138	novel	2250	14	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	9129	junction_10	29478.68350090868	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	63	1943	50.0	-10	True	AATAAA	-15
PB.1993.1	chr11	-	3495	21	novel_in_catalog	EML3	novel	671	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	152942	junction_20	106680.070538632	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	289	2751	0.0	0	True	AATAAA	-17
PB.60.7	chr1	-	2257	16	full-splice_match	DNAJC11	ENST00000377577.9	3311	16	103	951	1	-6	multi-exon	FALSE	canonical	1	346547	junction_6	108170.8813901823	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	22	1701	40.0	-16	True	TATAAA	-18
PB.1993.3	chr11	-	3266	22	novel_not_in_catalog	EML3	novel	671	3	NA	NA	4	0	intron_retention	FALSE	canonical	1	2781	junction_3	125497.16247470224	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2724	286	3009	0.0	3	True	AATAAA	-17
PB.1993.2	chr11	-	3069	22	full-splice_match	EML3	ENST00000394773.6	3256	22	186	1	-49	0	multi-exon	FALSE	canonical	1	152942	junction_21	104326.68348143646	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	123	2813	0.0	-9	True	AATAAA	-16
PB.6543.6	chr2	+	2105	11	novel_in_catalog	MPHOSPH10	novel	2484	11	NA	NA	0	-150	combination_of_known_junctions	FALSE	canonical	1	3496	junction_1	147621.51726912984	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	544	2103	80.0	0	True	AGTAAA	-19
PB.877.1	chr1	+	1295	6	full-splice_match	SDHC	ENST00000367975.6	13566	6	124	12147	0	4	multi-exon	FALSE	canonical	1	93650	junction_4	260619.41929595344	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	26	535	30.0	0	True	ATTAAA	-18
PB.500.1	chr1	-	3841	2	novel_in_catalog	GNG5	novel	557	3	NA	NA	361	1	intron_retention	FALSE	canonical	1	870876	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	68	207	114	320	25.0	-22	True	AATAAA	-19
PB.6682.2	chr2	+	2609	16	novel_not_in_catalog	CCDC138	novel	2250	14	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	3344	junction_13	37096.474385699905	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	1017	1904	50.0	-21	True	AATAAA	-15
PB.4546.1	chr16	+	3253	2	incomplete-splice_match	AC116667.2	ENST00000641075.1	823	4	-34	9455	-34	-9455	3prime_fragment	FALSE	canonical	1	213	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	NA	False	NA	NA
PB.9543.25	chr5	-	2513	24	novel_not_in_catalog	LARS	novel	4766	32	NA	NA	-2	1979	intron_retention	FALSE	canonical	1	7183	junction_23	236925.4384818455	NA	3	1	TRUE	NA	NA	NA	C	coding	755	2265	248	2512	55.0	-3	True	TATAAA	-9
PB.9543.24	chr5	-	2532	24	incomplete-splice_match	LARS	ENST00000394434.6	4766	32	63	18040	26	1979	3prime_fragment	FALSE	canonical	1	407291	junction_19	173573.98273631098	NA	8	NA	TRUE	NA	NA	NA	C	coding	809	2427	105	2531	55.0	52	True	TATAAA	-9
PB.9543.27	chr5	-	2206	19	incomplete-splice_match	LARS	ENST00000394434.6	4766	32	6	30206	-4	0	3prime_fragment	FALSE	canonical	1	407291	junction_14	180601.20480919819	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	162	2054	20.0	-5	True	AATAAA	-17
PB.9543.26	chr5	-	2314	20	incomplete-splice_match	LARS	ENST00000394434.6	4766	32	39	29738	2	6	3prime_fragment	FALSE	canonical	1	407291	junction_15	175792.90152289803	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	129	2222	30.0	28	True	AATAAA	-20
PB.9543.20	chr5	-	3561	31	novel_in_catalog	LARS	novel	4766	32	NA	NA	8	-175	intron_retention	FALSE	canonical	1	19448	junction_27	263200.2336757575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	149	3541	20.0	8	True	ATTAAA	-20
PB.9483.9	chr5	+	5200	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-6	2	intron_retention	FALSE	canonical	1	147046	junction_7	1079778.0750355956	NA	3	NA	TRUE	NA	NA	NA	C	coding	504	1515	2642	4156	20.0	-12	True	NA	NA
PB.9483.8	chr5	+	3166	15	full-splice_match	MATR3	ENST00000394805.7	4843	15	90	1587	1	12	multi-exon	FALSE	canonical	1	147046	junction_9	1015535.0633418196	NA	2	NA	TRUE	NA	NA	NA	C	coding	847	2544	246	2789	25.0	-5	True	AATAAA	-11
PB.9483.7	chr5	+	3874	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-10	2	no_combination_of_known_junctions	FALSE	canonical	1	19335	junction_1	1071685.8909624044	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	287	2830	20.0	-16	True	NA	NA
PB.9483.6	chr5	+	2525	13	incomplete-splice_match	MATR3	ENST00000510056.5	3040	14	-71	4268	11	-763	3prime_fragment	FALSE	canonical	1	147046	junction_9	1061077.1174789893	NA	3	NA	TRUE	NA	NA	NA	C	coding	733	2199	325	2523	65.0	-315	False	AAGAAA	-23
PB.9483.5	chr5	+	3323	18	full-splice_match	MATR3	ENST00000361059.7	3970	18	25	622	-3	12	multi-exon	FALSE	canonical	1	56564	junction_4	1045505.2597089404	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	403	2946	25.0	26	True	AATAAA	-11
PB.9483.4	chr5	+	2057	4	full-splice_match	SNHG4	ENST00000514110.5	679	4	-17	-1361	-4	0	multi-exon	FALSE	canonical	1	260297	junction_1	59817.48741704961	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	12	True	AATAAA	-17
PB.9483.3	chr5	+	4012	16	novel_not_in_catalog	MATR3	novel	3249	17	NA	NA	-1	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	929004.0305376649	NA	2	1	TRUE	NA	NA	NA	C	coding	895	2688	278	2965	10.0	0	True	NA	NA
PB.9483.2	chr5	+	4138	19	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	15438	junction_5	1051281.469898114	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	552	3095	20.0	0	True	AAGAAA	-45
PB.9483.1	chr5	+	4020	18	full-splice_match	MATR3	ENST00000361059.7	3970	18	-1	-49	-1	2	multi-exon	FALSE	canonical	1	56564	junction_4	1045505.2597089404	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	429	2972	10.0	0	True	NA	NA
PB.11261.6	chr8	+	2813	16	full-splice_match	POP1	ENST00000401707.6	4719	16	-5	1911	-5	256	multi-exon	FALSE	canonical	1	102688	junction_13	15624.48421278461	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2727	87	2813	70.0	-5	True	NA	NA
PB.11098.24	chr8	+	2208	8	incomplete-splice_match	TACC1	ENST00000317827.8	7802	13	33	14536	-26	-15	3prime_fragment	FALSE	canonical	1	188558	junction_1	124270.01418504394	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1860	347	2206	60.0	0	True	ACTAAA	-12
PB.4210.1	chr16	-	7292	15	full-splice_match	SLX4	ENST00000294008.3	7307	15	11	4	-2	-4	multi-exon	FALSE	canonical	1	8620	junction_14	18788.93218134831	NA	1	NA	TRUE	NA	NA	NA	A	coding	1834	5505	631	6135	30.0	8	True	AATAAA	-17
PB.5442.1	chr18	-	4237	1	intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-36	False	NA	NA
PB.3687.31	chr14	+	2256	15	full-splice_match	KLC1	ENST00000389744.8	3250	15	-16	1010	0	-9	multi-exon	FALSE	canonical	1	213833	junction_13	373900.2924221201	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	298	1968	50.0	0	True	AATAAA	-29
PB.3687.30	chr14	+	2370	14	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	0	613	any annotated donor/acceptor	FALSE	canonical	0	0	junction_13	414929.50493563386	NA	6	2	TRUE	NA	NA	NA	C	coding	585	1758	298	2055	30.0	0	True	ATTAAA	-15
PB.10553.1	chr7	+	1811	3	full-splice_match	MRPS17	ENST00000285298.8	1845	3	37	-3	37	3	multi-exon	FALSE	canonical	1	141734	junction_2	73054.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	130	393	93	485	20.0	-21	True	AATAAA	-19
PB.881.7	chr1	+	2812	6	novel_not_in_catalog	FCGR2B	novel	1440	7	NA	NA	-11	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	87161.53358127656	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	AAAACA	-5
PB.5874.1	chr19	+	4540	4	full-splice_match	ZNF66	ENST00000344519.8	1745	4	-121	-2674	0	2674	multi-exon	FALSE	canonical	1	16254	junction_1	10809.430522567885	NA	0	NA	TRUE	NA	NA	NA	A	coding	573	1722	145	1866	75.0	0	True	NA	NA
PB.3687.32	chr14	+	2202	15	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	450662.56528059405	NA	5	3	TRUE	NA	NA	NA	C	coding	543	1632	297	1928	50.0	1	True	AATAAA	-15
PB.7487.15	chr21	-	3166	19	incomplete-splice_match	SCAF4	ENST00000286835.11	4193	20	-23	13744	-23	-782	3prime_fragment	FALSE	canonical	1	146965	junction_18	76103.8586148017	NA	1	NA	TRUE	NA	NA	NA	C	coding	853	2562	407	2968	40.0	19	True	AATAAA	-19
PB.7487.14	chr21	-	3933	19	incomplete-splice_match	SCAF4	ENST00000286835.11	4193	20	-12	12966	-12	-4	3prime_fragment	FALSE	canonical	1	146965	junction_18	76103.8586148017	NA	6	NA	TRUE	NA	NA	NA	C	coding	853	2562	396	2957	30.0	30	True	NA	NA
PB.7487.16	chr21	-	3104	19	incomplete-splice_match	SCAF4	ENST00000286835.11	4193	20	-107	13890	-107	-928	3prime_fragment	FALSE	canonical	1	146965	junction_18	76103.8586148017	NA	2	NA	TRUE	NA	NA	NA	C	coding	853	2562	491	3052	0.0	-65	False	TTTAAA	-42
PB.7487.11	chr21	-	3854	19	novel_in_catalog	SCAF4	novel	4193	20	NA	NA	-41	-8	no_combination_of_known_junctions	FALSE	canonical	1	5234	junction_13	101079.3651554938	NA	0	NA	TRUE	NA	NA	NA	C	coding	1088	3267	425	3691	70.0	1	True	TTTAAA	-10
PB.7487.10	chr21	-	3810	20	full-splice_match	SCAF4	ENST00000399804.5	4127	20	114	203	0	-8	multi-exon	FALSE	canonical	1	146965	junction_19	81922.91913845725	NA	0	NA	TRUE	NA	NA	NA	C	coding	1125	3378	270	3647	70.0	21	True	TTTAAA	-10
PB.7487.13	chr21	-	3905	19	incomplete-splice_match	SCAF4	ENST00000399804.5	4127	20	-43	12959	-43	3	3prime_fragment	FALSE	canonical	1	146965	junction_18	83857.42480707771	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	427	2922	15.0	-1	True	TTTAAA	-4
PB.7487.12	chr21	-	4416	19	incomplete-splice_match	SCAF4	ENST00000286835.11	4193	20	-22	12493	-22	469	3prime_fragment	FALSE	canonical	1	146965	junction_18	76103.8586148017	NA	2	1	TRUE	NA	NA	NA	C	coding	853	2562	406	2967	45.0	20	True	AATAAA	-16
PB.5347.12	chr17	-	1897	6	full-splice_match	CYBC1	ENST00000584503.5	584	6	-20	-1293	-7	0	multi-exon	FALSE	canonical	1	14981	junction_5	267304.2013215655	NA	0	NA	TRUE	NA	NA	NA	C	coding	63	192	346	537	15.0	-6	True	CATAAA	-17
PB.5347.13	chr17	-	1850	5	full-splice_match	CYBC1	ENST00000581196.5	668	5	77	-1259	-2	0	multi-exon	FALSE	canonical	1	6458	junction_4	301929.5359901876	NA	0	NA	TRUE	NA	NA	NA	C	coding	63	192	299	490	15.0	-1	True	CATAAA	-17
PB.5347.10	chr17	-	2060	6	full-splice_match	CYBC1	ENST00000577436.5	1079	6	35	-1016	35	0	multi-exon	FALSE	canonical	1	30477	junction_4	313635.8399855475	NA	3	1	TRUE	NA	NA	NA	C	coding	173	522	179	700	15.0	8948	False	CATAAA	-17
PB.5347.11	chr17	-	1972	6	full-splice_match	CYBC1	ENST00000434650.6	2050	6	78	0	-1	0	multi-exon	FALSE	canonical	1	30477	junction_4	289639.31129347754	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	91	612	15.0	0	True	CATAAA	-17
PB.7308.11	chr20	+	3150	5	novel_in_catalog	YWHAB	novel	3049	6	NA	NA	4	0	intron_retention	FALSE	canonical	1	1649071	junction_1	620968.5284716529	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	185	628	100.0	-11	True	NA	NA
PB.7308.10	chr20	+	2880	6	full-splice_match	YWHAB	ENST00000353703.8	3049	6	25	144	-1	-144	multi-exon	FALSE	canonical	1	1649071	junction_1	644481.5878708716	NA	4	NA	TRUE	NA	NA	NA	C	coding	246	741	190	930	55.0	-16	True	NA	NA
PB.5347.14	chr17	-	2018	5	novel_in_catalog	CYBC1	novel	1849	4	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	6734	junction_3	315544.71094798914	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	541	1212	15.0	8915	False	CATAAA	-16
PB.7308.12	chr20	+	1715	6	full-splice_match	YWHAB	ENST00000353703.8	3049	6	45	1289	7	723	multi-exon	FALSE	canonical	1	1649071	junction_1	644481.5878708716	NA	3	NA	TRUE	NA	NA	NA	C	coding	246	741	170	910	25.0	4	True	AAAAAG	-11
PB.5888.1	chr19	-	2207	4	full-splice_match	ZNF675	ENST00000359788.8	2301	4	-13	107	-3	0	multi-exon	FALSE	canonical	1	77120	junction_3	9529.864788594268	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	183	1889	35.0	-4	True	AATAAA	-15
PB.5888.2	chr19	-	1835	4	full-splice_match	ZNF675	ENST00000359788.8	2301	4	-10	476	0	-369	multi-exon	FALSE	canonical	1	77120	junction_3	9529.864788594268	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1656	180	1835	70.0	-1	True	NA	NA
PB.5888.3	chr19	-	1669	4	full-splice_match	ZNF675	ENST00000359788.8	2301	4	-8	640	2	-533	multi-exon	FALSE	canonical	1	77120	junction_3	9529.864788594268	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1491	178	1668	45.0	1	True	TTTAAA	-23
PB.11712.9	chr9	+	3795	4	full-splice_match	AKAP2	ENST00000374525.5	6866	4	-23	3094	-23	-491	multi-exon	FALSE	canonical	1	136664	junction_1	108446.8329366976	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2847	28	2874	50.0	-8729	False	NA	NA
PB.10920.4	chr7	+	1753	2	full-splice_match	LRRC61	ENST00000323078.7	1684	2	-18	-51	-18	4	multi-exon	TRUE	canonical	1	2463	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	461	1240	15.0	-10	True	ATTAAA	-19
PB.10920.2	chr7	+	4497	3	full-splice_match	LRRC61	ENST00000463441.5	667	3	104	-3934	29	3934	multi-exon	FALSE	canonical	1	78552	junction_2	31458.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	2182	2892	35.0	-35	True	AATAAA	-17
PB.10920.3	chr7	+	3486	1	genic	LRRC61	novel	NA	NA	NA	NA	-19	763	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	181	546	2	547	95.0	7	True	NA	NA
PB.10920.1	chr7	+	1693	3	full-splice_match	LRRC61	ENST00000359623.8	1877	3	188	-4	184	4	multi-exon	FALSE	canonical	1	141468	junction_1	18777.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	401	1180	15.0	120	False	ATTAAA	-19
PB.9205.2	chr5	-	2303	2	intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	69586	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	coding	8	27	348	374	20.0	-1	True	NA	NA
PB.9274.2	chr5	-	3461	1	intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.9274.1	chr5	-	1794	7	novel_not_in_catalog	GUSBP3	novel	1296	4	NA	NA	-31715	14083	any annotated donor/acceptor	FALSE	canonical	1	230	junction_6	7375.689609943073	NA	4	NA	TRUE	NA	NA	NA	A	coding	140	423	773	1195	95.0	NA	False	NA	NA
PB.6512.6	chr2	+	4166	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	58	-363	-22	363	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	100	1284	45.0	-20	True	AATAAA	-10
PB.5292.7	chr17	-	1702	1	incomplete-splice_match	TIMP2	ENST00000585421.5	3345	5	19464	8	19403	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	AATAAA	-11
PB.5292.5	chr17	-	3265	5	full-splice_match	TIMP2	ENST00000262768.11	3652	5	379	8	379	-4	multi-exon	FALSE	canonical	1	1198899	junction_4	495756.26093298104	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	152	583	30.0	378	False	AATAAA	-11
PB.5292.4	chr17	-	3417	5	novel_not_in_catalog	TIMP2	novel	3345	5	NA	NA	-537	-4	any annotated donor/acceptor	FALSE	canonical	1	585	junction_4	996548.2118575599	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	196	735	30.0	-541	False	AATAAA	-11
PB.315.3	chr1	-	2233	12	novel_not_in_catalog	TRIT1	novel	5930	12	NA	NA	2	-23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	122018.32869059584	NA	1	NA	TRUE	NA	NA	NA	B	coding	386	1161	403	1563	70.0	1	True	NA	NA
PB.315.2	chr1	-	4270	10	novel_not_in_catalog	TRIT1	novel	5930	12	NA	NA	0	-23	intron_retention	FALSE	non_canonical	0	0	junction_8	111339.9277259721	NA	0	NA	TRUE	NA	NA	NA	B	coding	234	705	14	718	70.0	-1	True	NA	NA
PB.315.1	chr1	-	2088	11	novel_not_in_catalog	TRIT1	novel	5930	12	NA	NA	-1	-23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	97003.97122159484	NA	2	NA	TRUE	NA	NA	NA	B	coding	467	1404	15	1418	70.0	-2	True	NA	NA
PB.315.6	chr1	-	1935	1	novel_in_catalog	TRIT1	novel	2026	10	NA	NA	2	-29010	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	15	NA	NA	NA	NA	NA	B	coding	122	369	1077	1445	75.0	1	True	NA	NA
PB.315.5	chr1	-	1800	9	novel_not_in_catalog	TRIT1	novel	5930	12	NA	NA	0	-23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	126985.95974155716	NA	0	NA	TRUE	NA	NA	NA	B	coding	221	666	465	1130	70.0	-3	True	NA	NA
PB.315.4	chr1	-	1938	10	novel_not_in_catalog	TRIT1	novel	5930	12	NA	NA	-1	-23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	127065.26439764899	NA	0	NA	TRUE	NA	NA	NA	B	coding	221	666	603	1268	70.0	-2	True	NA	NA
PB.4932.1	chr17	-	1920	13	full-splice_match	TBC1D3L	ENST00000612727.4	2148	13	44	184	44	-1	multi-exon	TRUE	canonical	1	185	junction_11	3504.8644638162864	NA	0	NA	TRUE	NA	NA	NA	A	coding	530	1593	14	1606	40.0	NA	False	NA	NA
PB.9205.1	chr5	-	2613	4	intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	32803.15498376473	NA	0	NA	FALSE	NA	NA	NA	A	coding	105	318	2019	2336	40.0	-1	True	AATAAA	-21
PB.11284.53	chr8	-	2205	12	full-splice_match	AZIN1	ENST00000337198.9	4721	12	574	1942	30	248	multi-exon	FALSE	canonical	1	686724	junction_10	254522.01808630873	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	591	1937	35.0	-1	True	AATAAA	-17
PB.7089.1	chr2	-	1997	6	full-splice_match	RAB17	ENST00000264601.7	1966	6	-33	2	-33	-2	multi-exon	FALSE	canonical	1	71208	junction_4	39761.980076449916	NA	2	NA	TRUE	NA	NA	NA	A	coding	212	639	664	1302	20.0	7866	False	ATTAAA	-16
PB.3063.7	chr13	+	6358	13	full-splice_match	NUP58	ENST00000463407.5	6360	13	-6	8	0	-8	multi-exon	FALSE	canonical	1	198129	junction_7	107347.26394187025	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	150	1607	55.0	0	True	AATAAA	-4
PB.3063.6	chr13	+	4137	15	novel_in_catalog	NUP58	novel	4332	16	NA	NA	0	5	no_combination_of_known_junctions	FALSE	canonical	1	24124	junction_13	133691.3784395285	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	150	1850	20.0	0	True	AATAAA	-29
PB.3063.5	chr13	+	4184	16	novel_not_in_catalog	NUP58	novel	4332	16	NA	NA	0	4	any annotated donor/acceptor	FALSE	canonical	1	1389	junction_14	133075.42989421033	NA	2	NA	TRUE	NA	NA	NA	C	coding	582	1749	150	1898	20.0	0	True	AATAAA	-28
PB.3063.4	chr13	+	1599	1	novel_in_catalog	NUP58	novel	4332	16	NA	NA	0	-4726	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	148	447	1	447	80.0	0	True	AATGAA	-5
PB.3063.3	chr13	+	3316	16	full-splice_match	NUP58	ENST00000381736.7	4332	16	141	875	18	823	multi-exon	FALSE	canonical	1	198129	junction_7	96050.53225038486	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	110	1909	60.0	6	True	AATAGA	-17
PB.3063.2	chr13	+	4221	16	full-splice_match	NUP58	ENST00000381736.7	4332	16	116	-5	-5	5	multi-exon	FALSE	canonical	1	198129	junction_7	96050.53225038486	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	135	1934	20.0	15	True	AATAAA	-29
PB.3063.1	chr13	+	2695	16	full-splice_match	NUP58	ENST00000381736.7	4332	16	139	1498	16	200	multi-exon	FALSE	canonical	1	198129	junction_7	96050.53225038486	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	112	1911	75.0	4	True	NA	NA
PB.3063.9	chr13	+	5546	13	full-splice_match	NUP58	ENST00000463407.5	6360	13	-6	820	0	-789	multi-exon	FALSE	canonical	1	198129	junction_7	107347.26394187025	NA	3	NA	TRUE	NA	NA	NA	C	coding	485	1458	150	1607	35.0	0	True	NA	NA
PB.3063.8	chr13	+	6000	13	full-splice_match	NUP58	ENST00000463407.5	6360	13	-6	366	0	-335	multi-exon	FALSE	canonical	1	198129	junction_7	107347.26394187025	NA	2	NA	TRUE	NA	NA	NA	C	coding	485	1458	150	1607	70.0	0	True	NA	NA
PB.301.1	chr1	-	3529	11	full-splice_match	MTF1	ENST00000373036.4	7972	11	-1	4444	-1	-4444	multi-exon	FALSE	canonical	1	74018	junction_1	15898.737975386599	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	143	2404	95.0	-30	False	NA	NA
PB.301.2	chr1	-	2733	11	full-splice_match	MTF1	ENST00000373036.4	7972	11	10	5229	10	-5229	multi-exon	FALSE	canonical	1	74018	junction_1	15898.737975386599	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	132	2393	15.0	-19	False	CATAAA	-32
PB.301.3	chr1	-	2563	11	full-splice_match	MTF1	ENST00000373036.4	7972	11	22	5387	22	-5387	multi-exon	FALSE	canonical	1	74018	junction_1	15898.737975386599	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	120	2381	90.0	-7	True	NA	NA
PB.1111.4	chr1	-	1890	8	full-splice_match	TMEM206	ENST00000261455.8	2475	8	34	551	34	-6	multi-exon	FALSE	canonical	1	145313	junction_3	32466.44608307639	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	105	1157	50.0	24	True	AATAAA	-10
PB.9094.8	chr4	-	8254	19	novel_in_catalog	ACSL1	novel	3636	20	NA	NA	74	-1	intron_retention	FALSE	canonical	1	449852	junction_18	243907.11791533564	NA	54	2	TRUE	NA	NA	NA	C	coding	365	1098	5629	6726	25.0	7	True	AATAAA	-19
PB.9094.7	chr4	-	3696	21	full-splice_match	ACSL1	ENST00000281455.6	3832	21	95	41	35	-41	multi-exon	FALSE	canonical	1	449852	junction_20	233090.99116149364	NA	1	NA	TRUE	NA	NA	NA	C	coding	698	2097	117	2213	65.0	426	False	TATAAA	-17
PB.9094.4	chr4	-	3484	20	full-splice_match	ACSL1	ENST00000454703.6	3636	20	151	1	66	0	multi-exon	FALSE	canonical	1	14088	junction_19	288387.5398730652	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	372	1955	25.0	-1	True	AATAAA	-20
PB.9094.3	chr4	-	3854	22	novel_not_in_catalog	ACSL1	novel	3636	20	NA	NA	-2869	0	any annotated donor/acceptor	FALSE	canonical	1	4849	junction_21	329964.83686028706	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	229	2325	25.0	-5	True	AATAAA	-20
PB.9094.1	chr4	-	3859	21	novel_in_catalog	ACSL1	novel	3636	20	NA	NA	64	2	combination_of_known_junctions	FALSE	canonical	1	52010	junction_20	279730.6020154525	NA	2	NA	TRUE	NA	NA	NA	C	coding	698	2097	231	2327	20.0	-25	True	AATAAA	-23
PB.9341.2	chr5	-	4250	3	full-splice_match	LYSMD3	ENST00000315948.10	4259	3	5	4	5	-4	multi-exon	FALSE	canonical	1	117527	junction_2	18753.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	141	1061	45.0	7	True	AATAAA	-19
PB.9341.3	chr5	-	3792	3	novel_in_catalog	LYSMD3	novel	3863	4	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	1	2711	junction_1	57408.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	150	453	158	610	45.0	-10	True	AATAAA	-19
PB.9341.1	chr5	-	4210	3	full-splice_match	LYSMD3	ENST00000509384.5	1538	3	-10	-2662	-10	-3	multi-exon	FALSE	canonical	1	10214	junction_1	53656.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	159	542	40.0	-11	True	AATAAA	-20
PB.9341.6	chr5	-	4341	4	full-splice_match	LYSMD3	ENST00000453259.2	553	4	12	-3800	9	-7	multi-exon	FALSE	canonical	1	2953	junction_1	53866.56360551197	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	750	406	1155	40.0	11	True	AATAAA	-16
PB.9341.7	chr5	-	3634	3	full-splice_match	LYSMD3	ENST00000315948.10	4259	3	-18	643	-15	-643	multi-exon	FALSE	canonical	1	117527	junction_2	18753.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	164	1084	30.0	-16	True	AATAAA	-17
PB.9341.4	chr5	-	4337	4	novel_in_catalog	LYSMD3	novel	3863	4	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	1107	junction_3	72464.02863643604	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	229	1149	45.0	3	True	AATAAA	-18
PB.9341.8	chr5	-	3449	3	full-splice_match	LYSMD3	ENST00000315948.10	4259	3	-42	852	-39	-852	multi-exon	FALSE	canonical	1	117527	junction_2	18753.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	188	1108	20.0	119	False	NA	NA
PB.9341.9	chr5	-	3052	3	full-splice_match	LYSMD3	ENST00000315948.10	4259	3	5	1202	5	-1202	multi-exon	FALSE	canonical	1	117527	junction_2	18753.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	141	1061	25.0	7	True	TTTAAA	-3
PB.1767.2	chr11	-	3606	22	full-splice_match	OSBPL5	ENST00000263650.11	3889	22	14	269	-4	-6	multi-exon	FALSE	canonical	1	83495	junction_21	38955.25731486214	NA	2	NA	TRUE	NA	NA	NA	C	coding	879	2640	147	2786	15.0	-2	True	AATAAA	-17
PB.1767.1	chr11	-	3868	22	full-splice_match	OSBPL5	ENST00000263650.11	3889	22	26	-5	8	5	multi-exon	TRUE	canonical	1	83495	junction_21	38955.25731486214	NA	2	NA	TRUE	NA	NA	NA	C	coding	879	2640	135	2774	30.0	10	True	AATAAA	-27
PB.639.9	chr1	+	3590	24	novel_not_in_catalog	ATP1A1	novel	654	5	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	1381055.4448202753	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	1361	3262	10.0	1	True	AATAAA	-18
PB.802.1	chr1	+	1810	8	novel_in_catalog	FDPS	novel	1196	9	NA	NA	15	-1	intron_retention	FALSE	canonical	1	766667	junction_1	496331.7388324145	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	219	749	0.0	-6027	False	AATAAA	-15
PB.802.2	chr1	+	1222	10	full-splice_match	FDPS	ENST00000447866.5	1256	10	90	-56	-5	0	multi-exon	FALSE	canonical	1	766667	junction_1	450733.641688939	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	105	1166	0.0	18	True	AATAAA	-16
PB.802.3	chr1	+	2032	1	novel_in_catalog	FDPS	novel	1196	9	NA	NA	-18	-2007	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	75	True	ATTAAA	-12
PB.802.4	chr1	+	1234	10	full-splice_match	FDPS	ENST00000467076.5	1178	10	-37	-19	0	0	multi-exon	FALSE	canonical	1	842671	junction_3	435504.88284385455	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	116	1177	0.0	-14	True	AATAAA	-17
PB.802.5	chr1	+	2314	6	novel_in_catalog	FDPS	novel	1196	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	766667	junction_1	509652.92210703547	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	137	667	0.0	-14	True	AATAAA	-16
PB.802.6	chr1	+	2079	2	full-splice_match	FDPS	ENST00000487002.1	2017	2	-62	0	0	0	multi-exon	FALSE	canonical	1	1135408	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	1214	1543	100.0	-14	True	NA	NA
PB.802.7	chr1	+	1355	9	novel_in_catalog	FDPS	novel	1196	9	NA	NA	2	0	intron_retention	FALSE	canonical	1	766667	junction_1	478062.7955451433	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	133	1299	0.0	-10	True	AATAAA	-16
PB.8301.1	chr3	+	2758	3	full-splice_match	AC078785.1	ENST00000470313.5	491	3	-34	-2233	-33	1924	multi-exon	FALSE	canonical	1	2421	junction_2	1844.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	73	222	148	369	10.0	-19	True	AATAAA	-20
PB.802.9	chr1	+	1447	11	full-splice_match	FDPS	ENST00000356657.10	1478	11	31	0	-12	0	multi-exon	FALSE	canonical	1	34424	junction_1	631290.3864533025	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	132	1391	0.0	81	True	AATAAA	-16
PB.10442.21	chr7	-	1725	2	incomplete-splice_match	OSBPL3	ENST00000313367.6	6760	23	-27	94688	-27	-19244	3prime_fragment	FALSE	canonical	1	114529	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-61	True	NA	NA
PB.149.2	chr1	+	4299	18	full-splice_match	NBPF3	ENST00000318220.10	4401	18	-4	106	2	-1	multi-exon	FALSE	canonical	1	1053	junction_17	20802.057403570765	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	1053	2786	15.0	-4	True	ATTAAA	-15
PB.149.3	chr1	+	2747	3	novel_not_in_catalog	NBPF3	novel	2133	14	NA	NA	-2	2810	any annotated donor/acceptor	FALSE	canonical	1	6744	junction_2	19587.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	NA	NA
PB.149.1	chr1	+	4180	18	novel_in_catalog	NBPF3	novel	2133	14	NA	NA	-62	-1	combination_of_known_junctions	FALSE	canonical	1	1053	junction_17	20863.394835507566	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	934	2667	15.0	-141	False	ATTAAA	-15
PB.10645.14	chr7	+	3389	17	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	1	77976	junction_16	108843.99136120238	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	250	2376	60.0	-15	True	AATGAA	-18
PB.10645.15	chr7	+	3744	19	novel_not_in_catalog	DMTF1	novel	3801	18	NA	NA	1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	153842.92512788594	NA	14	2	TRUE	NA	NA	NA	C	coding	723	2172	386	2557	25.0	-12	True	AATAAA	-19
PB.10645.16	chr7	+	3643	18	novel_not_in_catalog	DMTF1	novel	3801	18	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	13834	junction_5	142532.77027387294	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	500	2449	30.0	-1	True	AATAAA	-15
PB.10645.17	chr7	+	3918	18	full-splice_match	DMTF1	ENST00000447863.5	3954	18	41	-5	0	-2	multi-exon	FALSE	canonical	1	38972	junction_9	108926.11377509679	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	1244	2728	30.0	0	True	AATAAA	-22
PB.2454.18	chr12	-	1818	1	novel_in_catalog	M6PR	novel	2305	5	NA	NA	-22	-2365	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	100	303	331	633	75.0	-23	True	NA	NA
PB.10645.11	chr7	+	4500	16	incomplete-splice_match	DMTF1	ENST00000331242.11	3801	18	73	11	-2	-2	intron_retention	FALSE	canonical	1	111224	junction_1	93808.90906793211	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	254	2359	30.0	-19	True	AATAAA	-13
PB.10645.12	chr7	+	3751	17	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	77976	junction_16	119269.85664496028	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	1222	2550	30.0	-17	True	AATAAA	-22
PB.10645.13	chr7	+	4024	19	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	24375	junction_1	127596.05562385317	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	1360	2844	30.0	-16	True	AATAAA	-12
PB.2454.14	chr12	-	2243	7	novel_in_catalog	M6PR	novel	650	3	NA	NA	-20	181	combination_of_known_junctions	FALSE	canonical	1	30482	junction_6	606079.4296252669	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	516	995	60.0	-21	True	NA	NA
PB.2454.15	chr12	-	1414	7	full-splice_match	M6PR	ENST00000000412.7	2756	7	287	1055	-23	229	multi-exon	FALSE	canonical	1	695698	junction_6	369279.61220823805	NA	2	1	TRUE	NA	NA	NA	C	coding	277	834	183	1016	30.0	-24	True	ATTAAA	-19
PB.2454.16	chr12	-	1360	7	novel_in_catalog	M6PR	novel	650	3	NA	NA	-8	208	combination_of_known_junctions	FALSE	canonical	1	30482	junction_6	606079.4296252669	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	504	983	75.0	-9	True	TTTAAA	-42
PB.2454.17	chr12	-	1867	6	novel_in_catalog	M6PR	novel	650	3	NA	NA	-22	208	intron_retention	FALSE	canonical	1	695698	junction_5	404501.4168387547	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	182	916	75.0	-23	True	TTTAAA	-42
PB.2454.10	chr12	-	2269	6	novel_not_in_catalog	M6PR	novel	650	3	NA	NA	-6	-15	any annotated donor/acceptor	FALSE	canonical	1	553	junction_1	779823.2640083007	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	502	831	75.0	-7	True	AAGAAA	-39
PB.10645.19	chr7	+	3700	18	full-splice_match	DMTF1	ENST00000331242.11	3801	18	92	9	0	0	multi-exon	FALSE	canonical	1	111224	junction_1	88764.68990488298	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	235	2517	30.0	0	True	AATAAA	-15
PB.10935.2	chr7	-	4536	15	full-splice_match	ABCF2	ENST00000287844.6	3546	15	16	-1006	16	1006	multi-exon	FALSE	canonical	1	198250	junction_7	165357.9553995618	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	95	1966	10.0	-23	True	AATACA	-15
PB.2454.13	chr12	-	2266	7	full-splice_match	M6PR	ENST00000000412.7	2756	7	285	205	-25	181	multi-exon	FALSE	canonical	1	695698	junction_6	369279.61220823805	NA	2	1	TRUE	NA	NA	NA	C	coding	277	834	185	1018	60.0	-26	True	NA	NA
PB.3073.1	chr13	-	4748	10	full-splice_match	LNX2	ENST00000316334.4	4627	10	-125	4	-125	-4	multi-exon	FALSE	canonical	1	26669	junction_9	29264.240964184883	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	256	2328	20.0	-1	True	AATAAA	-16
PB.3073.2	chr13	-	4433	9	novel_in_catalog	LNX2	novel	4627	10	NA	NA	-179	-4	no_combination_of_known_junctions	TRUE	canonical	1	7956	junction_5	42661.86697083825	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	310	2013	20.0	-55	True	AATAAA	-16
PB.3073.4	chr13	-	5180	10	novel_not_in_catalog	LNX2	novel	4627	10	NA	NA	-200	-4	any annotated donor/acceptor	FALSE	canonical	1	4230	junction_9	35667.569441672684	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	688	2760	20.0	-76	True	AATAAA	-16
PB.3073.5	chr13	-	4868	11	novel_in_catalog	LNX2	novel	4627	10	NA	NA	-204	-5	no_combination_of_known_junctions	FALSE	canonical	1	259	junction_10	45235.98419355989	NA	5	NA	TRUE	NA	NA	NA	C	coding	690	2073	377	2449	20.0	-80	True	AATAAA	-15
PB.3073.6	chr13	-	4649	10	novel_not_in_catalog	LNX2	novel	4627	10	NA	NA	-169	-6	any annotated donor/acceptor	FALSE	canonical	1	2431	junction_7	42459.1423521949	NA	13	1	TRUE	NA	NA	NA	C	coding	643	1932	300	2231	20.0	-45	True	AATAAA	-14
PB.11702.10	chr9	+	4532	9	novel_not_in_catalog	FKTN	novel	2576	11	NA	NA	0	3324	any annotated donor/acceptor	FALSE	canonical	1	1929	junction_1	39955.77137891815	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	434	1333	25.0	9	True	AATAAA	-16
PB.8473.24	chr3	+	4623	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	118983	junction_1	385511.9195583714	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	284	1210	25.0	-1128	False	AATAAA	-37
PB.10849.14	chr7	+	3741	17	novel_in_catalog	MKLN1	novel	2460	19	NA	NA	-6	1074	combination_of_known_junctions	FALSE	canonical	1	2333	junction_16	92170.3299718575	NA	2	NA	TRUE	NA	NA	NA	C	coding	682	2049	10	2058	50.0	0	True	ATTAAA	-22
PB.10849.15	chr7	+	2484	19	novel_not_in_catalog	MKLN1	novel	2460	19	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	1899	junction_1	105644.95964694936	NA	1	1	TRUE	NA	NA	NA	C	coding	643	1932	320	2251	55.0	3	True	AATAAA	-24
PB.10849.12	chr7	+	2536	18	novel_not_in_catalog	MKLN1	novel	2460	19	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	2529	junction_8	106595.5255931388	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	1085	2302	55.0	-11	True	AATAAA	-25
PB.10849.13	chr7	+	2779	10	incomplete-splice_match	MKLN1	ENST00000494785.5	2386	17	0	39374	0	24883	3prime_fragment	FALSE	canonical	1	170190	junction_1	71474.1296861673	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	18	1196	25.0	-8	True	AATAAA	-18
PB.10849.10	chr7	+	3358	17	novel_in_catalog	MKLN1	novel	2460	19	NA	NA	-3	680	combination_of_known_junctions	FALSE	canonical	1	2333	junction_16	92170.3299718575	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	21	2069	95.0	-11	True	NA	NA
PB.10849.11	chr7	+	2763	18	novel_not_in_catalog	MKLN1	novel	2460	19	NA	NA	-3	367	any annotated donor/acceptor	FALSE	canonical	1	4439	junction_16	109362.41043755758	NA	2	NA	TRUE	NA	NA	NA	C	coding	713	2142	21	2162	25.0	-11	True	ATTAAA	-11
PB.3050.1	chr13	+	2240	2	full-splice_match	MRPL57	ENST00000309594.4	2246	2	1	5	1	-5	multi-exon	FALSE	canonical	1	916547	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	78	386	40.0	-16	True	AATAAA	-8
PB.3050.2	chr13	+	1940	2	full-splice_match	MRPL57	ENST00000309594.4	2246	2	13	293	13	-293	multi-exon	FALSE	canonical	1	916547	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	66	374	70.0	-4	True	NA	NA
PB.2452.12	chr12	+	1748	9	novel_in_catalog	RIMKLB	novel	570	2	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	34842	junction_6	53975.76467253035	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	354	1277	40.0	5	True	AATAAA	-16
PB.2452.10	chr12	+	5347	9	novel_not_in_catalog	RIMKLB	novel	570	2	NA	NA	-41	-1	any annotated donor/acceptor	FALSE	canonical	1	5273	junction_6	58936.92345847381	NA	11	NA	TRUE	NA	NA	NA	C	coding	386	1161	359	1519	40.0	0	True	AATAAA	-15
PB.2452.11	chr12	+	1855	6	full-splice_match	RIMKLB	ENST00000535829.5	2236	6	98	283	-39	-283	multi-exon	FALSE	canonical	1	51546	junction_2	25928.30989787032	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	357	1517	50.0	2	True	NA	NA
PB.5772.1	chr19	+	2615	7	novel_not_in_catalog	MRI1	novel	862	4	NA	NA	-34	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	144989.129723193	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	92	937	15.0	-9958	False	AATAAA	-19
PB.5772.2	chr19	+	2405	6	novel_not_in_catalog	MRI1	novel	862	4	NA	NA	-10	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	161895.6675956463	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	781	1203	15.0	-39	True	AATAAA	-19
PB.5772.3	chr19	+	2097	6	novel_in_catalog	MRI1	novel	862	4	NA	NA	-10	133	intron_retention	FALSE	canonical	1	78070	junction_3	124459.70839110945	NA	3	NA	TRUE	NA	NA	NA	C	coding	281	846	68	913	15.0	-39	True	NA	NA
PB.5772.4	chr19	+	2487	7	novel_not_in_catalog	MRI1	novel	862	4	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136871.3231174327	NA	4	NA	TRUE	NA	NA	NA	C	coding	369	1110	67	1176	15.0	-38	True	AATAAA	-19
PB.5772.5	chr19	+	2606	7	novel_not_in_catalog	MRI1	novel	862	4	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	144989.129723193	NA	7	NA	TRUE	NA	NA	NA	C	coding	281	846	53	898	15.0	-24	True	AATAAA	-19
PB.5772.6	chr19	+	2481	7	novel_not_in_catalog	MRI1	novel	862	4	NA	NA	5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	136871.3231174327	NA	6	1	TRUE	NA	NA	NA	C	coding	369	1110	53	1162	15.0	-24	True	AATAAA	-19
PB.5772.7	chr19	+	3138	6	full-splice_match	MRI1	ENST00000040663.7	1735	6	12	-1415	12	-1	multi-exon	FALSE	canonical	1	134200	junction_1	107286.84501578001	NA	3	NA	TRUE	NA	NA	NA	C	coding	369	1110	29	1138	15.0	0	True	AATAAA	-19
PB.9269.15	chr5	+	2978	16	novel_in_catalog	RAD17	novel	464	5	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1762	junction_5	66872.25541649459	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	1023	2471	10.0	0	True	ATTAAA	-12
PB.1129.23	chr1	-	2658	18	incomplete-splice_match	EPRS	ENST00000366923.7	5014	32	154	28381	26	194	3prime_fragment	FALSE	canonical	1	605857	junction_10	171546.43764932282	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2541	117	2657	35.0	167	False	NA	NA
PB.1129.22	chr1	-	4516	18	incomplete-splice_match	EPRS	ENST00000366923.7	5014	32	168	26509	-39	2066	3prime_fragment	FALSE	canonical	1	605857	junction_10	171546.43764932282	NA	6	3	TRUE	NA	NA	NA	C	coding	882	2649	103	2751	25.0	-32	True	AATAAA	-15
PB.1129.25	chr1	-	1894	15	incomplete-splice_match	EPRS	ENST00000366923.7	5014	32	165	37666	37	-5066	3prime_fragment	FALSE	canonical	1	605857	junction_7	154467.7132319309	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1788	106	1893	70.0	-35	True	NA	NA
PB.10125.9	chr6	-	2854	17	novel_in_catalog	USP45	novel	5826	18	NA	NA	-6	341	no_combination_of_known_junctions	FALSE	canonical	1	7086	junction_1	33192.28715138268	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	51	2216	35.0	-14	True	NA	NA
PB.1129.27	chr1	-	1856	14	incomplete-splice_match	EPRS	ENST00000366923.7	5014	32	144	38613	16	-6013	3prime_fragment	FALSE	canonical	1	605857	junction_6	148997.52735202602	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1728	127	1854	65.0	157	False	TATAAA	-22
PB.9269.14	chr5	+	3179	18	novel_not_in_catalog	RAD17	novel	464	5	NA	NA	1	-1	intron_retention	FALSE	canonical	1	11	junction_1	59772.00009273996	NA	13	2	TRUE	NA	NA	NA	C	coding	670	2013	661	2673	10.0	-5	True	ATTAAA	-11
PB.1129.28	chr1	-	1088	9	incomplete-splice_match	EPRS	ENST00000609181.5	2968	21	-55	35196	24	-21291	3prime_fragment	FALSE	canonical	1	605857	junction_1	146797.96272172855	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	969	119	1087	60.0	165	False	NA	NA
PB.10125.8	chr6	-	4784	17	novel_in_catalog	USP45	novel	5826	18	NA	NA	-1	352	intron_retention	FALSE	canonical	1	20297	junction_16	29922.56704787166	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	2797	4260	30.0	-6	True	NA	NA
PB.6489.18	chr2	-	4918	26	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-2	0	intron_retention	FALSE	canonical	1	23922	junction_25	421968.65906595474	NA	2	NA	TRUE	NA	NA	NA	C	coding	1067	3204	829	4032	15.0	-5	True	AATAAA	-16
PB.9254.1	chr5	-	3865	11	full-splice_match	TRIM23	ENST00000231524.13	4186	11	313	8	-13	-8	multi-exon	FALSE	canonical	1	110375	junction_8	26953.583056803414	NA	6	NA	TRUE	NA	NA	NA	C	coding	574	1725	60	1784	35.0	-14	True	AATAAA	-15
PB.2867.14	chr12	+	3357	4	incomplete-splice_match	TMEM263	ENST00000550344.5	925	5	1036	-2452	118	-8	5prime_fragment	FALSE	canonical	1	3484	junction_1	221064.20686005833	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	370	720	40.0	-4360	False	AATAAA	-10
PB.4750.1	chr17	+	2922	5	full-splice_match	EFNB3	ENST00000226091.2	3222	5	247	53	247	-53	multi-exon	TRUE	canonical	1	47379	junction_1	16478.09750092528	NA	3	NA	TRUE	NA	NA	NA	A	coding	340	1023	151	1173	80.0	220	False	NA	NA
PB.9254.2	chr5	-	3368	11	full-splice_match	TRIM23	ENST00000231524.13	4186	11	326	492	0	4	multi-exon	FALSE	canonical	1	110375	junction_8	26953.583056803414	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	47	1771	30.0	-1	True	AATAAA	-30
PB.4306.10	chr16	+	2665	21	novel_not_in_catalog	POLR3E	novel	3655	20	NA	NA	1	142	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	119750.89386909602	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	36	2162	10.0	-13	True	ATTAAA	-18
PB.10125.4	chr6	-	7172	17	novel_in_catalog	USP45	novel	5826	18	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	20297	junction_16	29211.948798755173	NA	32	1	TRUE	NA	NA	NA	C	coding	775	2328	54	2381	30.0	-17	True	AATAAA	-21
PB.9269.13	chr5	+	2684	18	full-splice_match	RAD17	ENST00000354312.7	2943	18	-13	272	0	36	multi-exon	FALSE	canonical	1	33272	junction_10	55202.20021823637	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	435	2447	30.0	-6	True	ATTAAA	-19
PB.2867.12	chr12	+	3237	4	novel_not_in_catalog	TMEM263	novel	3349	3	NA	NA	14	-8	any annotated donor/acceptor	FALSE	canonical	1	476	junction_3	54102.84135483705	NA	2	NA	TRUE	NA	NA	NA	C	coding	119	360	241	600	40.0	2	True	AATAAA	-10
PB.9269.12	chr5	+	2781	17	full-splice_match	RAD17	ENST00000521422.5	2323	17	-19	-439	-5	0	multi-exon	FALSE	canonical	1	19698	junction_2	61471.50984793179	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	757	2274	10.0	-17	True	ATTAAA	-12
PB.2867.13	chr12	+	3228	3	full-splice_match	TMEM263	ENST00000547081.1	833	3	140	-2535	140	1	multi-exon	FALSE	canonical	1	212744	junction_1	132408.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	232	582	20.0	-4338	False	AATAAA	-19
PB.2867.10	chr12	+	1890	4	full-splice_match	TMEM263	ENST00000280756.8	3362	4	145	1327	0	316	multi-exon	FALSE	canonical	1	111727	junction_1	154260.14536562	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	274	624	20.0	-12	True	GATAAA	-15
PB.8789.1	chr4	+	5871	11	novel_in_catalog	KIAA1211	novel	830	5	NA	NA	25	811	combination_of_known_junctions	TRUE	canonical	1	19917	junction_1	23371.65911718721	NA	4	NA	TRUE	NA	NA	NA	A	coding	1233	3702	538	4239	40.0	-33	True	AATAAA	-17
PB.2867.11	chr12	+	3300	4	novel_in_catalog	TMEM263	novel	3349	3	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	1	2291	junction_3	52532.36511163591	NA	6	NA	TRUE	NA	NA	NA	C	coding	56	171	194	364	40.0	0	True	AATAAA	-10
PB.11002.3	chr8	-	5153	16	full-splice_match	PSD3	ENST00000327040.12	11689	16	-97	6633	-97	1703	multi-exon	FALSE	canonical	1	29872	junction_15	38680.45278064304	NA	3	NA	TRUE	NA	NA	NA	C	coding	1047	3144	201	3344	60.0	10	True	NA	NA
PB.11091.1	chr8	+	4102	6	novel_in_catalog	BAG4	novel	530	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3267	junction_1	74855.83882904526	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	565	1296	15.0	-543	False	AATAAA	-28
PB.8601.18	chr3	+	6270	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	57	1	15	0	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	1	1	TRUE	NA	NA	NA	C	coding	960	2883	178	3060	15.0	-7	True	TATAAA	-18
PB.8601.19	chr3	+	3578	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	22	2797	-8	-394	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	171	3164	40.0	0	True	AATAAA	-18
PB.8601.12	chr3	+	6410	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	-14	1	-14	0	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	207	3200	15.0	1	True	TATAAA	-18
PB.9416.5	chr5	+	3035	13	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	17	-1	combination_of_known_junctions	TRUE	canonical	1	65772	junction_1	83713.99301391216	NA	2	2	TRUE	NA	NA	NA	C	coding	424	1275	703	1977	25.0	-331	False	AATAAA	-28
PB.8601.10	chr3	+	4166	28	full-splice_match	OPA1	ENST00000646793.1	5830	28	-88	1752	15	39	multi-exon	FALSE	canonical	1	29773	junction_3	149037.88271280943	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	220	2994	30.0	-163	False	AATAAA	-30
PB.5362.10	chr18	-	2351	7	novel_not_in_catalog	YES1	novel	4554	12	NA	NA	23486	10460	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	131615.38090714675	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	192	776	90.0	NA	False	NA	NA
PB.8601.16	chr3	+	6030	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	178	285	30	0	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	57	3104	35.0	0	True	ATTAAA	-16
PB.8601.17	chr3	+	4345	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	13	2039	13	39	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	180	3173	30.0	-9	True	AATAAA	-30
PB.8601.14	chr3	+	4172	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	116	2040	13	38	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	119	3001	30.0	-62	False	AATAAA	-29
PB.9416.4	chr5	+	3377	2	full-splice_match	CSNK1G3	ENST00000508708.1	920	2	46	-2503	-23	2503	multi-exon	FALSE	canonical	1	65772	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	2	9	420	428	95.0	-31	True	NA	NA
PB.3864.8	chr15	-	1909	16	novel_in_catalog	SPPL2A	novel	7372	15	NA	NA	105	-131	combination_of_known_junctions	FALSE	canonical	1	48370	junction_7	125466.98746335185	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	72	1688	25.0	343	False	AATAAA	-15
PB.3864.9	chr15	-	2121	16	novel_not_in_catalog	SPPL2A	novel	7372	15	NA	NA	7	-123	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	142525.36986618675	NA	27	2	TRUE	NA	NA	NA	C	coding	278	837	358	1194	40.0	3	True	AATAAA	-23
PB.3864.4	chr15	-	2709	17	novel_not_in_catalog	SPPL2A	novel	7372	15	NA	NA	-1	1962	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131354.47709393498	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	178	1794	40.0	-5	True	AATAAA	-10
PB.3864.5	chr15	-	2652	16	novel_not_in_catalog	SPPL2A	novel	7372	15	NA	NA	1	1962	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131944.91446785242	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	176	1738	40.0	-3	True	AATAAA	-10
PB.3864.6	chr15	-	2212	15	novel_in_catalog	SPPL2A	novel	7372	15	NA	NA	3	-124	intron_retention	FALSE	canonical	1	48370	junction_6	126792.92907270789	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	174	1340	35.0	-1	True	AATAAA	-22
PB.3864.7	chr15	-	1968	15	full-splice_match	SPPL2A	ENST00000261854.9	7372	15	111	5293	12	-111	multi-exon	FALSE	canonical	1	48370	junction_6	124537.43762691833	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	165	1727	40.0	8	True	AATAAA	-35
PB.9635.2	chr5	+	1464	11	full-splice_match	FAF2	ENST00000261942.6	4515	11	2	3049	2	-3049	multi-exon	FALSE	canonical	1	151212	junction_3	79676.84526862243	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	52	1389	75.0	2	True	NA	NA
PB.3864.1	chr15	-	3537	17	novel_not_in_catalog	SPPL2A	novel	7372	15	NA	NA	-1	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136850.4661747489	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	178	1740	50.0	-5	True	AATAAA	-10
PB.3864.2	chr15	-	3598	16	novel_not_in_catalog	SPPL2A	novel	7372	15	NA	NA	-1	-2277	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131944.91446785242	NA	3	NA	TRUE	NA	NA	NA	C	coding	520	1563	178	1740	80.0	-5	True	TTTAAA	-35
PB.3864.3	chr15	-	2543	16	novel_not_in_catalog	SPPL2A	novel	7372	15	NA	NA	5	-2277	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	131944.91446785242	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	172	1734	80.0	1	True	TTTAAA	-35
PB.439.6	chr1	-	2399	3	full-splice_match	MYSM1	ENST00000489282.1	698	3	7	-1708	2	-510	multi-exon	FALSE	canonical	1	84195	junction_2	30796.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-10	True	NA	NA
PB.439.7	chr1	-	1992	2	novel_not_in_catalog	MYSM1	novel	7785	20	NA	NA	4	-510	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-8	True	NA	NA
PB.882.1	chr1	+	2084	5	full-splice_match	FCRLA	ENST00000236938.10	2341	5	259	-2	-8	-1	multi-exon	FALSE	canonical	1	146025	junction_1	80006.63840894704	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	35	1114	15.0	2	True	NA	NA
PB.882.2	chr1	+	1710	3	full-splice_match	FCRLA	ENST00000367957.6	1684	3	-24	-2	-24	-1	multi-exon	FALSE	canonical	1	8793	junction_1	178872.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	30	740	15.0	0	True	NA	NA
PB.882.3	chr1	+	1835	4	full-splice_match	FCRLA	ENST00000349527.8	888	4	-48	-899	-13	0	multi-exon	FALSE	canonical	1	15150	junction_3	99383.00400079593	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	19	864	15.0	-3	True	NA	NA
PB.882.4	chr1	+	1840	4	full-splice_match	FCRLA	ENST00000546024.5	2077	4	237	0	0	0	multi-exon	FALSE	canonical	1	11159	junction_2	146480.14768182373	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	6	869	15.0	-43	False	NA	NA
PB.439.4	chr1	-	4168	20	novel_not_in_catalog	MYSM1	novel	7785	20	NA	NA	-4	793	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	45515.3871505297	NA	5	NA	TRUE	NA	NA	NA	C	coding	828	2487	45	2531	60.0	0	True	AATACA	-7
PB.882.6	chr1	+	2034	4	novel_not_in_catalog	FCRLA	novel	2341	5	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	2615	junction_1	169576.51334492705	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	318	1064	15.0	0	True	NA	NA
PB.10178.1	chr6	-	3346	1	full-splice_match	TSPYL1	ENST00000368608.3	3326	1	-27	7	-27	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	437	1314	101	1414	50.0	28	False	ATTAAA	-41
PB.1081.11	chr1	-	1675	7	full-splice_match	FCMR	ENST00000442471.4	1441	7	-33	-201	-33	28	multi-exon	FALSE	canonical	1	35937	junction_6	130544.70886815836	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	178	1014	30.0	9866	False	CATAAA	-23
PB.8257.20	chr3	+	3234	9	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	2488	junction_1	53649.90733085543	NA	12	1	TRUE	NA	NA	NA	C	coding	296	891	262	1152	40.0	0	True	NA	NA
PB.10178.2	chr6	-	3204	1	full-splice_match	TSPYL1	ENST00000368608.3	3326	1	-25	147	-25	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	437	1314	99	1412	20.0	30	False	AATAAA	-19
PB.2035.1	chr11	+	2733	14	full-splice_match	PPP2R5B	ENST00000164133.6	2745	14	13	-1	13	1	multi-exon	FALSE	canonical	1	128041	junction_1	74994.73750618307	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	610	2103	25.0	-5	True	AATAAA	-13
PB.2035.3	chr11	+	2350	14	novel_in_catalog	PPP2R5B	novel	887	5	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	6880	junction_1	99372.97082794496	NA	3	NA	TRUE	NA	NA	NA	C	coding	411	1236	486	1721	25.0	0	True	AATAAA	-12
PB.2035.2	chr11	+	2801	13	novel_in_catalog	PPP2R5B	novel	887	5	NA	NA	13	0	intron_retention	TRUE	canonical	1	128041	junction_1	77579.46525494396	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	610	1575	25.0	-5	True	AATAAA	-12
PB.750.2	chr1	-	6484	18	novel_in_catalog	POGZ	novel	6152	17	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	1	52120	junction_16	113560.27325561203	NA	1	NA	TRUE	NA	NA	NA	C	coding	1357	4074	337	4410	10.0	-43	True	AATAAA	-16
PB.439.2	chr1	-	7766	20	full-splice_match	MYSM1	ENST00000472487.5	7785	20	18	1	-2	0	multi-exon	TRUE	canonical	1	56967	junction_15	34455.50841004982	NA	6	NA	TRUE	NA	NA	NA	C	coding	828	2487	23	2509	30.0	-14	True	AATAAA	-18
PB.750.1	chr1	-	6340	19	full-splice_match	POGZ	ENST00000271715.6	6626	19	285	1	-1	0	multi-exon	FALSE	canonical	1	59177	junction_18	95501.57162472882	NA	1	NA	TRUE	NA	NA	NA	C	coding	1410	4233	31	4263	20.0	-2	True	AATAAA	-19
PB.750.7	chr1	-	4737	19	full-splice_match	POGZ	ENST00000271715.6	6626	19	114	1775	114	0	multi-exon	FALSE	canonical	1	59177	junction_18	95501.57162472882	NA	1	NA	TRUE	NA	NA	NA	C	coding	1410	4233	202	4434	80.0	-11	True	TTTAAA	-32
PB.750.4	chr1	-	4885	19	novel_not_in_catalog	POGZ	novel	6152	17	NA	NA	-186	-13	any annotated donor/acceptor	FALSE	canonical	1	27756	junction_18	100714.58182573829	NA	1	NA	TRUE	NA	NA	NA	C	coding	1410	4233	88	4320	75.0	NA	False	GATAAA	-36
PB.439.3	chr1	-	2485	1	incomplete-splice_match	MYSM1	ENST00000472487.5	7785	20	42857	12	11248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	AATAAA	-7
PB.2394.5	chr12	-	3317	9	novel_in_catalog	FOXM1	novel	2518	2	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	164426	junction_7	109437.99838200338	NA	1	NA	TRUE	NA	NA	NA	C	coding	762	2289	77	2365	10.0	225	False	AATAAA	-12
PB.2394.4	chr12	-	3502	10	novel_not_in_catalog	FOXM1	novel	2518	2	NA	NA	-57	0	intron_retention	FALSE	canonical	1	135	junction_1	169020.82514783295	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	226	1536	10.0	76	False	AATAAA	-14
PB.11475.4	chr9	-	1969	4	incomplete-splice_match	RPS6	ENST00000380384.5	1355	5	-32	-14	-2	-1	intron_retention	FALSE	canonical	1	20079160	junction_2	4668028.833244595	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	1309	1932	15.0	-3	True	AATAAA	-16
PB.11475.5	chr9	-	1824	5	novel_not_in_catalog	RPS6	novel	1387	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	30372	junction_4	12059882.82145584	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	1164	1787	15.0	-1	True	AATAAA	-16
PB.8998.1	chr4	+	4385	9	novel_not_in_catalog	ELMOD2	novel	4409	9	NA	NA	0	3	any annotated donor/acceptor	TRUE	canonical	1	7532	junction_7	71789.8887566174	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	195	755	20.0	0	True	AATAAA	-21
PB.1866.1	chr11	+	2135	5	novel_not_in_catalog	BDNF-AS	novel	973	6	NA	NA	-1	1122	any annotated donor/acceptor	FALSE	canonical	1	8832	junction_2	6655.826883265519	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.1866.2	chr11	+	2839	2	novel_not_in_catalog	BDNF-AS	novel	973	6	NA	NA	-1	-147485	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	2	True	NA	NA
PB.2394.2	chr12	-	3457	8	full-splice_match	FOXM1	ENST00000361953.7	3370	8	-84	-3	31	1	multi-exon	FALSE	canonical	1	165210	junction_7	115202.21092213003	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	253	2499	5.0	49	True	AATAAA	-18
PB.11475.8	chr9	-	2066	3	novel_in_catalog	RPS6	novel	1387	6	NA	NA	-2	-1124	intron_retention	FALSE	canonical	1	14744462	junction_2	8303027.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	44	319	90.0	-3	True	NA	NA
PB.8569.1	chr3	+	5748	46	novel_in_catalog	VPS8	novel	5047	47	NA	NA	-5	0	intron_retention	FALSE	canonical	1	80604	junction_1	44456.93027269327	NA	0	NA	TRUE	NA	NA	NA	C	coding	1204	3615	1555	5169	5.0	-30	True	AATAAA	-19
PB.8569.3	chr3	+	2072	22	incomplete-splice_match	VPS8	ENST00000436792.6	5011	47	-5	157761	-5	-6080	3prime_fragment	FALSE	canonical	1	80604	junction_1	36711.039841385966	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1923	149	2071	65.0	-30	True	AATGAA	-21
PB.10924.2	chr7	+	2942	3	full-splice_match	GIMAP4	ENST00000255945.3	2060	3	115	-997	2	997	multi-exon	FALSE	canonical	1	228180	junction_2	5140.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	61	1050	30.0	2	True	NA	NA
PB.8569.5	chr3	+	2673	22	incomplete-splice_match	VPS8	ENST00000492449.5	2980	27	29009	-286	-405	-3	5prime_fragment	FALSE	canonical	1	124682	junction_2	42102.21480808381	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	272	2101	15.0	NA	False	AATAAA	-12
PB.8569.4	chr3	+	3644	1	novel_in_catalog	VPS8	novel	5047	47	NA	NA	3	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	708	1022	95.0	-22	True	NA	NA
PB.5212.1	chr17	+	1550	1	antisense	novelGene_ABCA5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6458	False	NA	NA
PB.6417.2	chr2	+	3048	9	novel_in_catalog	NDUFAF7	novel	946	9	NA	NA	4	-2	intron_retention	FALSE	canonical	1	130271	junction_1	26659.583769256413	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	72	716	35.0	-23	True	AATAAA	-23
PB.8035.2	chr3	+	2173	5	novel_in_catalog	ZNF619	novel	2233	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	16792	junction_1	7395.842176520535	NA	0	NA	TRUE	NA	NA	NA	B	coding	576	1731	298	2028	20.0	-23	True	TTTAAA	-16
PB.8035.1	chr3	+	2834	6	novel_not_in_catalog	ZNF619	novel	2233	6	NA	NA	0	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	12086.527564193117	NA	0	NA	TRUE	NA	NA	NA	B	coding	594	1785	308	2092	30.0	-33	True	NA	NA
PB.12187.1	chrX	+	2284	2	novel_not_in_catalog	RPL36A-HNRNPH2	novel	572	4	NA	NA	17205	1831	any annotated donor/acceptor	FALSE	canonical	1	109235	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1350	145	1494	45.0	-5	True	AATAAA	-21
PB.886.12	chr1	+	1997	7	incomplete-splice_match	UHMK1	ENST00000489294.1	8478	8	2111	6056	1869	-500	5prime_fragment	FALSE	canonical	1	394626	junction_2	63663.24452844741	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	127	993	25.0	-191	False	AGTAAA	-12
PB.12187.3	chrX	+	2303	2	novel_not_in_catalog	RPL36A-HNRNPH2	novel	572	4	NA	NA	17218	1830	any annotated donor/acceptor	FALSE	canonical	1	113	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1350	165	1514	45.0	8	True	AATAAA	-20
PB.12187.2	chrX	+	2285	2	full-splice_match	HNRNPH2	ENST00000316594.5	2223	2	-68	6	-68	-6	multi-exon	FALSE	canonical	1	916459	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	449	1350	147	1496	45.0	5	True	AATAAA	-20
PB.11752.10	chr9	-	5794	38	full-splice_match	CDK5RAP2	ENST00000349780.8	6228	38	103	331	6	0	multi-exon	FALSE	canonical	1	117178	junction_22	78821.36431835327	NA	0	NA	TRUE	NA	NA	NA	C	coding	1892	5679	81	5759	15.0	103	False	AATAAA	-15
PB.877.4	chr1	+	2678	5	full-splice_match	SDHC	ENST00000342751.8	1127	5	0	-1551	0	1551	multi-exon	FALSE	canonical	1	84442	junction_4	254671.87620482853	NA	4	NA	TRUE	NA	NA	NA	C	coding	150	453	26	478	55.0	0	True	AGTAAA	-7
PB.439.8	chr1	-	1970	1	novel_in_catalog	MYSM1	novel	7785	20	NA	NA	5	-5712	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	3122	False	NA	NA
PB.11459.1	chr9	-	2634	9	full-splice_match	NFIB	ENST00000380959.7	8198	9	-194	5758	-110	-3	multi-exon	FALSE	canonical	1	80809	junction_1	48033.556053132015	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	672	1931	85.0	8207	False	NA	NA
PB.1318.1	chr10	-	1878	3	full-splice_match	VIM-AS1	ENST00000605833.1	918	3	-12	-948	-12	-9	multi-exon	FALSE	canonical	1	10781	junction_2	20360.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-50	True	AATAAA	-16
PB.11752.17	chr9	-	5675	36	incomplete-splice_match	CDK5RAP2	ENST00000349780.8	6228	38	-8	5733	4	-5402	3prime_fragment	FALSE	canonical	1	117178	junction_20	69961.38258510613	NA	0	NA	TRUE	NA	NA	NA	C	coding	1828	5484	192	5675	55.0	-8	True	AATGAA	-23
PB.5820.2	chr19	+	1902	4	novel_not_in_catalog	BISPR	novel	452	5	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	22883.533075117575	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.5820.3	chr19	+	1685	4	novel_not_in_catalog	BISPR	novel	452	5	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	22713.497881215917	NA	7	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.5820.1	chr19	+	2034	3	novel_not_in_catalog	BISPR	novel	452	5	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_1	25735.5	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6	True	NA	NA
PB.5820.4	chr19	+	1940	4	full-splice_match	BISPR	ENST00000635435.2	1269	4	60	-731	0	2	multi-exon	FALSE	canonical	1	44958	junction_1	2912.899624467383	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.5820.5	chr19	+	1822	3	incomplete-splice_match	BISPR	ENST00000634675.1	1806	4	287	2	-74	2	5prime_fragment	FALSE	canonical	1	45691	junction_1	2890.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9938	False	NA	NA
PB.11752.15	chr9	-	5819	37	novel_in_catalog	CDK5RAP2	novel	5551	35	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	30577	junction_19	88423.2769836135	NA	2	NA	TRUE	NA	NA	NA	C	coding	1860	5583	201	5783	15.0	-17	True	AATAAA	-16
PB.12197.2	chrX	+	1273	3	full-splice_match	TCEAL4	ENST00000472484.5	1273	3	-2	2	-2	-2	multi-exon	FALSE	canonical	1	1211502	junction_1	58072.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	215	862	35.0	-12	True	AATAAA	-24
PB.12197.3	chrX	+	3887	3	full-splice_match	TCEAL4	ENST00000472484.5	1273	3	2	-2616	0	2616	multi-exon	FALSE	canonical	1	1211502	junction_1	58072.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	215	648	211	858	15.0	-8	True	NA	NA
PB.2418.8	chr12	-	2885	14	novel_in_catalog	NOP2	novel	2613	15	NA	NA	4	-1	intron_retention	FALSE	canonical	1	142815	junction_10	145202.7700486013	NA	17	1	TRUE	NA	NA	NA	C	coding	237	714	2051	2764	20.0	-30	True	AATACA	-16
PB.2418.9	chr12	-	2779	17	full-splice_match	NOP2	ENST00000620535.4	2791	17	10	2	2	-1	multi-exon	FALSE	non_canonical	0	0	junction_9	233561.5352259894	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	121	2658	20.0	-32	True	AATACA	-16
PB.1626.2	chr10	+	2570	13	novel_not_in_catalog	SFXN2	novel	770	6	NA	NA	0	-19	any annotated donor/acceptor	FALSE	canonical	1	2216	junction_5	43066.06803795768	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	81	419	45.0	-9	True	AATAAA	-14
PB.12197.4	chrX	+	3700	3	full-splice_match	TCEAL4	ENST00000472484.5	1273	3	2	-2429	0	2429	multi-exon	FALSE	canonical	1	1211502	junction_1	58072.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	211	858	15.0	-8	True	NA	NA
PB.1626.1	chr10	+	2499	12	full-splice_match	SFXN2	ENST00000369893.9	6866	12	62	4305	1	-2	multi-exon	FALSE	canonical	1	72808	junction_1	15809.832106624961	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	106	1074	50.0	-34	True	AATAAA	-31
PB.2418.2	chr12	-	2849	15	novel_in_catalog	NOP2	novel	2613	15	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_8	216371.09880915855	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	180	1787	20.0	-23	True	AATACA	-18
PB.2418.3	chr12	-	2995	14	novel_in_catalog	NOP2	novel	2613	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	175269.82040673256	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	687	1934	20.0	-34	True	AATACA	-17
PB.903.2	chr1	+	2586	16	full-splice_match	POU2F1	ENST00000367866.6	13905	16	54	11265	-3	172	multi-exon	FALSE	canonical	1	67949	junction_1	19611.273658451322	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	16	2316	90.0	-8	True	AAAACA	-45
PB.2418.1	chr12	-	2672	16	novel_in_catalog	NOP2	novel	2613	15	NA	NA	1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	177325.65409470667	NA	1	1	TRUE	NA	NA	NA	C	coding	812	2439	112	2550	20.0	-23	True	AATACA	-17
PB.2418.6	chr12	-	2767	15	novel_not_in_catalog	NOP2	novel	2613	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	213083.27138224433	NA	1	1	TRUE	NA	NA	NA	C	coding	415	1248	459	1706	20.0	-6	True	AATACA	-17
PB.2418.7	chr12	-	2715	16	novel_not_in_catalog	NOP2	novel	2613	15	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	225867.80623193437	NA	2	1	TRUE	NA	NA	NA	C	coding	688	2067	527	2593	20.0	-6	True	AATACA	-17
PB.2418.4	chr12	-	2803	15	novel_not_in_catalog	NOP2	novel	2613	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	198374.7631117241	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	1107	2681	20.0	5	True	AATACA	-17
PB.2418.5	chr12	-	2810	17	novel_in_catalog	NOP2	novel	2613	15	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	252343.2264646891	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	163	2688	20.0	-6	True	AATACA	-17
PB.2268.5	chr11	+	7617	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-4884	-1241	any annotated donor/acceptor	FALSE	canonical	1	7358	junction_1	31665.211456107478	NA	6	NA	TRUE	NA	NA	NA	B	coding	852	2559	198	2756	25.0	-5282	False	AATAAA	-25
PB.2268.4	chr11	+	3843	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-5033	741	any annotated donor/acceptor	FALSE	canonical	1	7358	junction_1	31665.211456107478	NA	1	NA	TRUE	NA	NA	NA	B	coding	852	2559	347	2905	20.0	10	True	GATAAA	-16
PB.2268.7	chr11	+	6453	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-5030	-2551	any annotated donor/acceptor	FALSE	canonical	1	7358	junction_1	31665.211456107478	NA	0	NA	TRUE	NA	NA	NA	B	coding	852	2559	344	2902	15.0	13	True	NA	NA
PB.5327.1	chr17	+	1930	11	full-splice_match	SLC25A10	ENST00000350690.9	1885	11	-46	1	-12	-1	multi-exon	FALSE	canonical	1	257456	junction_1	66728.02917282961	NA	0	NA	TRUE	NA	NA	NA	A	coding	287	864	133	996	10.0	-17	True	AATAAA	-15
PB.2268.1	chr11	+	6271	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-5095	-2798	any annotated donor/acceptor	TRUE	canonical	1	7358	junction_1	31665.211456107478	NA	4	NA	TRUE	NA	NA	NA	B	coding	852	2559	409	2967	20.0	-5493	False	ATTAAA	-20
PB.10800.8	chr7	+	1311	2	incomplete-splice_match	MET	ENST00000318493.10	4632	21	10	96124	10	619	3prime_fragment	FALSE	canonical	1	476710	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1134	178	1311	55.0	-22	True	NA	NA
PB.2268.3	chr11	+	4730	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-5029	1632	any annotated donor/acceptor	FALSE	canonical	1	7358	junction_1	31665.211456107478	NA	1	NA	TRUE	NA	NA	NA	B	coding	852	2559	343	2901	45.0	14	True	AATAAA	-17
PB.2268.2	chr11	+	8858	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-4880	2	any annotated donor/acceptor	FALSE	canonical	1	7358	junction_1	31665.211456107478	NA	4	NA	TRUE	NA	NA	NA	B	coding	852	2559	194	2752	30.0	-5278	False	ATTAAA	-25
PB.10800.5	chr7	+	5449	20	novel_in_catalog	MET	novel	767	3	NA	NA	-27	-1	no_combination_of_known_junctions	FALSE	canonical	1	35147	junction_1	147340.16197554758	NA	1	NA	TRUE	NA	NA	NA	C	coding	960	2883	306	3188	25.0	-74	True	ATTAAA	-23
PB.10800.4	chr7	+	3049	12	incomplete-splice_match	MET	ENST00000397752.7	6635	21	-31	28507	-29	-30	3prime_fragment	FALSE	canonical	1	368209	junction_2	92525.13689946351	NA	1	NA	TRUE	NA	NA	NA	C	coding	934	2805	232	3036	10.0	-76	True	AATAAA	-13
PB.10800.7	chr7	+	3172	12	novel_in_catalog	MET	novel	767	3	NA	NA	9	549	combination_of_known_junctions	FALSE	canonical	1	95279	junction_1	196392.09291067373	NA	4	NA	TRUE	NA	NA	NA	C	coding	896	2691	172	2862	35.0	-23	True	GATAAA	-20
PB.10800.6	chr7	+	6791	23	novel_not_in_catalog	MET	novel	767	3	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	8757	junction_2	192874.483595057	NA	9	NA	TRUE	NA	NA	NA	C	coding	1409	4230	301	4530	25.0	-31	True	ATTAAA	-23
PB.10800.1	chr7	+	6709	23	novel_not_in_catalog	MET	novel	767	3	NA	NA	-192	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	186448.45677371425	NA	33	4	TRUE	NA	NA	NA	C	coding	1409	4230	230	4459	35.0	2	True	ATTAAA	-12
PB.2268.8	chr11	+	3032	5	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-4999	-3541	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	42524.5827573593	NA	3	NA	TRUE	NA	NA	NA	B	coding	352	1059	313	1371	30.0	4	True	NA	NA
PB.10800.3	chr7	+	6645	22	novel_in_catalog	MET	novel	767	3	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	1	95279	junction_1	159286.00507260807	NA	0	NA	TRUE	NA	NA	NA	C	coding	1409	4230	155	4384	25.0	-6	True	ATTAAA	-23
PB.10800.2	chr7	+	6604	21	full-splice_match	MET	ENST00000397752.7	6635	21	29	2	16	-2	multi-exon	FALSE	canonical	1	336405	junction_17	100016.37379729381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	172	4344	25.0	-16	True	ATTAAA	-22
PB.8029.1	chr3	+	2284	3	novel_not_in_catalog	CCR8	novel	1253	2	NA	NA	-52	2766	intron_retention	FALSE	non_canonical	0	0	junction_2	4638.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	191	745	25.0	-116	False	AATAAA	-16
PB.8029.2	chr3	+	2888	3	novel_not_in_catalog	CCR8	novel	1253	2	NA	NA	-18	2766	intron_retention	FALSE	non_canonical	0	0	junction_2	4638.5	NA	2	1	TRUE	NA	NA	NA	C	coding	355	1068	157	1224	25.0	-1	True	AATAAA	-16
PB.8029.3	chr3	+	1897	2	full-splice_match	CCR8	ENST00000326306.4	1253	2	22	-666	22	601	multi-exon	FALSE	canonical	1	9277	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	117	1184	80.0	0	True	NA	NA
PB.4423.2	chr16	+	3790	10	novel_in_catalog	NOD2	novel	3125	12	NA	NA	-1	-6	no_combination_of_known_junctions	FALSE	canonical	1	676	junction_1	17034.78687499621	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	82	2538	30.0	-13	True	AATAAA	-11
PB.4423.3	chr16	+	4370	12	full-splice_match	NOD2	ENST00000647318.1	3125	12	15	-1260	0	2	multi-exon	FALSE	canonical	1	16698	junction_1	13483.086678508202	NA	0	NA	TRUE	NA	NA	NA	C	coding	1013	3042	69	3110	25.0	-12	True	AATAAA	-19
PB.4423.1	chr16	+	4639	12	full-splice_match	NOD2	ENST00000647318.1	3125	12	-13	-1501	-13	243	multi-exon	TRUE	canonical	1	16698	junction_1	13483.086678508202	NA	1	NA	TRUE	NA	NA	NA	C	coding	1013	3042	97	3138	85.0	-40	True	NA	NA
PB.4464.1	chr16	+	5267	9	full-splice_match	CCDC113	ENST00000219299.8	5272	9	-3	8	-3	-8	multi-exon	FALSE	canonical	1	32768	junction_1	7320.544703094162	NA	11	NA	TRUE	NA	NA	NA	A	coding	377	1134	83	1216	50.0	-3	True	AATAAA	-10
PB.621.2	chr1	-	3784	5	novel_in_catalog	SLC16A1	novel	3910	5	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	1	5863	junction_4	459047.0154635579	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	242	1744	30.0	1	True	AATAAA	-14
PB.3854.5	chr15	+	1528	1	full-splice_match	EID1	ENST00000530028.2	2298	1	231	539	-19	-539	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	187	564	61	624	50.0	-19	True	AATAAA	-28
PB.3854.4	chr15	+	1357	1	full-splice_match	EID1	ENST00000530028.2	2298	1	230	711	-20	687	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	187	564	62	625	40.0	-20	True	ATTAAA	-14
PB.3854.7	chr15	+	1671	1	full-splice_match	EID1	ENST00000530028.2	2298	1	249	378	-1	-378	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	187	564	43	606	20.0	-1	True	NA	NA
PB.3854.6	chr15	+	1004	1	full-splice_match	EID1	ENST00000530028.2	2298	1	237	1057	-13	341	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	187	564	55	618	65.0	-13	True	AATACA	-17
PB.3854.1	chr15	+	1885	1	full-splice_match	EID1	ENST00000530028.2	2298	1	179	234	-71	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	187	564	113	676	30.0	-71	False	ATTAAA	-13
PB.8823.7	chr4	+	5003	4	full-splice_match	PARM1	ENST00000307428.7	5011	4	8	0	8	0	multi-exon	FALSE	canonical	1	216896	junction_2	9300.593672807488	NA	4	NA	TRUE	NA	NA	NA	C	coding	310	933	205	1137	10.0	8	True	ATTAAA	-16
PB.3854.3	chr15	+	792	1	full-splice_match	EID1	ENST00000530028.2	2298	1	225	1281	-25	117	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	187	564	67	630	60.0	-25	True	AATAGA	-31
PB.3854.2	chr15	+	3249	1	full-splice_match	EID1	ENST00000530028.2	2298	1	217	-1168	-33	1168	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	187	564	75	638	80.0	-33	True	AGTAAA	-38
PB.8257.21	chr3	+	2435	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	11	-309	combination_of_known_junctions	FALSE	canonical	1	13197	junction_1	56366.66000252277	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	256	1251	45.0	-43	True	TTTAAA	-7
PB.8823.8	chr4	+	4976	3	novel_in_catalog	PARM1	novel	4308	3	NA	NA	-23	0	no_combination_of_known_junctions	FALSE	canonical	1	2301	junction_2	108393.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	257	1189	10.0	-1954	False	ATTAAA	-16
PB.8823.9	chr4	+	5120	5	novel_not_in_catalog	PARM1	novel	4308	3	NA	NA	-20	0	any annotated donor/acceptor	FALSE	canonical	1	3429	junction_1	111712.56805973087	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	1	339	10.0	-1951	False	ATTAAA	-16
PB.3854.8	chr15	+	2023	1	full-splice_match	EID1	ENST00000530028.2	2298	1	263	12	13	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	187	564	29	592	40.0	13	True	AGTAAA	-18
PB.11358.11	chr8	+	4890	19	novel_in_catalog	DENND3	novel	560	4	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	1450	junction_3	70888.96817517771	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	61	3324	25.0	21	True	AATAAA	-12
PB.2564.18	chr12	-	2394	13	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	-11354	0	any annotated donor/acceptor	FALSE	canonical	1	38	junction_12	261194.96088187332	NA	2	NA	TRUE	NA	NA	NA	C	coding	356	1071	155	1225	90.0	6951	False	NA	NA
PB.504.8	chr1	-	3008	14	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	455	junction_8	30566.637838427083	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	242	964	25.0	-5	True	AATAAA	-18
PB.2564.10	chr12	-	3202	18	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	7088	junction_2	303402.036574824	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	357	1793	90.0	30	True	NA	NA
PB.2564.11	chr12	-	3122	18	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	9184	junction_2	303124.5250477412	NA	2	1	TRUE	NA	NA	NA	C	coding	456	1371	343	1713	90.0	44	True	NA	NA
PB.2564.12	chr12	-	3097	17	novel_in_catalog	SLC38A1	novel	8066	17	NA	NA	221	0	combination_of_known_junctions	FALSE	canonical	1	9268	junction_16	228170.3221476554	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	465	1928	90.0	2557	False	NA	NA
PB.2564.13	chr12	-	2895	17	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	1150	-52	any annotated donor/acceptor	FALSE	canonical	1	5870	junction_16	228869.3882853053	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	315	1778	35.0	0	True	TATAAA	-36
PB.2564.14	chr12	-	2869	16	novel_in_catalog	SLC38A1	novel	8066	17	NA	NA	38	0	no_combination_of_known_junctions	FALSE	canonical	1	6792	junction_14	267152.90464043664	NA	2	NA	TRUE	NA	NA	NA	C	coding	403	1212	489	1700	90.0	1269	False	NA	NA
PB.2564.15	chr12	-	2785	16	novel_in_catalog	SLC38A1	novel	8066	17	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	6792	junction_14	264860.89557442954	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	405	1616	90.0	19	True	NA	NA
PB.2564.16	chr12	-	2769	15	novel_in_catalog	SLC38A1	novel	8066	17	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	8818	junction_14	240795.23265677333	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	389	1600	90.0	-1	True	NA	NA
PB.2564.17	chr12	-	2670	15	novel_in_catalog	SLC38A1	novel	8066	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	7954	junction_14	240987.005533377	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	119	1501	90.0	19	True	NA	NA
PB.8844.1	chr4	+	2753	1	incomplete-splice_match	BMP2K	ENST00000502613.1	6902	9	53986	10	41282	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	4529	False	AATAAA	-26
PB.11724.8	chr9	+	2980	9	full-splice_match	HSDL2	ENST00000398803.1	2983	9	3	0	3	0	multi-exon	FALSE	canonical	1	13887	junction_3	171786.15380593832	NA	3	NA	TRUE	NA	NA	NA	C	coding	345	1038	82	1119	30.0	-25	True	NA	NA
PB.6714.2	chr2	+	3451	27	novel_in_catalog	PTPN4	novel	10300	27	NA	NA	-110	78	combination_of_known_junctions	FALSE	canonical	1	7814	junction_4	33923.77231809489	NA	3	2	TRUE	NA	NA	NA	C	coding	933	2802	559	3360	70.0	-363	False	NA	NA
PB.5466.18	chr18	-	3869	14	novel_in_catalog	PIAS2	novel	11075	14	NA	NA	1	-782	combination_of_known_junctions	FALSE	canonical	1	14288	junction_13	64038.052328838094	NA	6	NA	TRUE	NA	NA	NA	C	coding	563	1692	294	1985	90.0	2	True	NA	NA
PB.5466.19	chr18	-	3797	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-36	782	-34	-782	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	195	1913	90.0	2604	False	NA	NA
PB.12343.3	chrX	-	7192	3	full-splice_match	MECP2	ENST00000453960.6	1729	3	14	-5477	5	-3184	multi-exon	FALSE	canonical	1	60891	junction_2	121235.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	86	1582	90.0	-14	False	NA	NA
PB.5466.17	chr18	-	4542	13	full-splice_match	PIAS2	ENST00000324794.11	4543	13	-11	12	-9	-12	multi-exon	FALSE	canonical	1	67898	junction_1	43246.88239333623	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	170	1888	30.0	-10	True	AATAAA	-12
PB.12343.1	chrX	-	7308	4	full-splice_match	MECP2	ENST00000303391.10	10505	4	13	3184	-5	-3184	multi-exon	FALSE	canonical	1	138088	junction_3	67549.02730280842	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	250	1698	90.0	-6	True	NA	NA
PB.5466.15	chr18	-	2341	14	novel_not_in_catalog	PIAS2	novel	11075	14	NA	NA	3	193	any annotated donor/acceptor	FALSE	canonical	1	8287	junction_1	53739.51306090956	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	156	1898	30.0	4	True	AATAAA	-25
PB.5466.12	chr18	-	2365	13	novel_in_catalog	PIAS2	novel	11075	14	NA	NA	1	664	combination_of_known_junctions	FALSE	canonical	1	1376	junction_12	53442.317053581755	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	553	1548	55.0	2	True	TATAAA	-19
PB.12343.6	chrX	-	1702	3	full-splice_match	MECP2	ENST00000453960.6	1729	3	24	3	-3	2	multi-exon	FALSE	canonical	1	60891	junction_2	121235.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	76	1572	25.0	-4	True	AATAAA	-23
PB.12343.5	chrX	-	1800	4	full-splice_match	MECP2	ENST00000303391.10	10505	4	41	8664	23	2	multi-exon	FALSE	canonical	1	138088	junction_3	67549.02730280842	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	222	1670	25.0	-17	True	AATAAA	-23
PB.12343.4	chrX	-	2691	1	incomplete-splice_match	MECP2	ENST00000303391.10	10505	4	70308	3184	6727	-3184	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	139	420	1	420	90.0	2791	False	NA	NA
PB.631.1	chr1	-	3081	1	incomplete-splice_match	TRIM33	ENST00000358465.6	8339	20	115296	7	1974	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ATTAAA	-23
PB.4005.6	chr15	-	1290	7	full-splice_match	TSPAN3	ENST00000267970.8	6467	7	87	5090	-19	-162	multi-exon	FALSE	canonical	1	1350155	junction_6	389730.41725830606	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	188	949	15.0	-33	True	NA	NA
PB.4005.7	chr15	-	2633	2	full-splice_match	TSPAN3	ENST00000559373.1	393	2	-26	-2214	4	2214	multi-exon	FALSE	canonical	1	6560	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-10	True	AATAAA	-19
PB.4005.5	chr15	-	1602	7	full-splice_match	TSPAN3	ENST00000267970.8	6467	7	76	4789	-30	-109	multi-exon	FALSE	canonical	1	1350155	junction_6	389730.41725830606	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	199	960	40.0	23	False	NA	NA
PB.4005.2	chr15	-	1734	7	full-splice_match	TSPAN3	ENST00000267970.8	6467	7	85	4648	-21	8	multi-exon	FALSE	canonical	1	1350155	junction_6	389730.41725830606	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	190	951	35.0	32	False	AATAGA	-13
PB.4005.3	chr15	-	1527	8	novel_not_in_catalog	TSPAN3	novel	6467	7	NA	NA	-21	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	840253.0512657652	NA	5	NA	TRUE	NA	NA	NA	C	coding	253	762	102	863	30.0	-10	True	AATAAA	-18
PB.4005.1	chr15	-	3790	7	full-splice_match	TSPAN3	ENST00000267970.8	6467	7	78	2599	-28	2027	multi-exon	FALSE	canonical	1	1350155	junction_6	389730.41725830606	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	197	958	35.0	25	False	NA	NA
PB.7227.9	chr20	+	3283	12	incomplete-splice_match	TPX2	ENST00000300403.10	3497	18	-1	16543	-1	-16543	3prime_fragment	FALSE	canonical	1	581217	junction_6	98506.11016699119	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	530	1987	30.0	-53	True	AATAAA	-16
PB.7227.8	chr20	+	2960	18	full-splice_match	TPX2	ENST00000300403.10	3497	18	202	335	202	-335	multi-exon	FALSE	canonical	1	581217	junction_6	161232.20368062126	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	327	2570	60.0	-8318	False	TTTAAA	-13
PB.884.6	chr1	+	2199	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	4	5293	4	-5293	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	64	2076	70.0	7	True	NA	NA
PB.6726.9	chr2	-	3176	13	novel_in_catalog	ERCC3	novel	3390	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	19789	junction_11	141149.01291392863	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	1264	2877	35.0	-22	True	AATAAA	-16
PB.992.4	chr1	-	3478	15	novel_not_in_catalog	TRMT1L	novel	4392	15	NA	NA	0	-938	any annotated donor/acceptor	FALSE	canonical	1	5774	junction_1	58091.97188572126	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	279	2222	30.0	-29	True	TATAAA	-31
PB.7227.1	chr20	+	3241	18	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	-22	-4	any annotated donor/acceptor	FALSE	canonical	1	17640	junction_1	252215.3385349463	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	277	2520	15.0	-8542	False	AATAAA	-21
PB.7227.3	chr20	+	3620	19	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	-3	-5	any annotated donor/acceptor	FALSE	canonical	1	2352	junction_2	308522.74895418476	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	657	2900	15.0	-55	True	AATAAA	-20
PB.7227.2	chr20	+	3142	18	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	20	-314	any annotated donor/acceptor	FALSE	canonical	1	98651	junction_16	237711.97089432346	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	509	2731	45.0	-32	True	AATAAA	-14
PB.7227.5	chr20	+	2913	18	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	-3	-313	any annotated donor/acceptor	FALSE	canonical	1	17640	junction_1	252215.3385349463	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	258	2501	45.0	-55	True	AATAAA	-15
PB.7227.4	chr20	+	3476	18	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	98651	junction_16	237711.97089432346	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	532	2754	15.0	-55	True	AATAAA	-22
PB.1742.7	chr11	-	2372	9	novel_in_catalog	RNH1	novel	2973	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	357387	junction_8	548066.435026357	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	1541	2197	15.0	-30	True	ATTAAA	-14
PB.7227.6	chr20	+	2450	16	incomplete-splice_match	TPX2	ENST00000300403.10	3497	18	-2	4315	-2	-4315	3prime_fragment	FALSE	canonical	1	581217	junction_6	151044.83717089513	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1920	531	2450	60.0	-54	True	NA	NA
PB.8541.3	chr3	+	2045	16	full-splice_match	FXR1	ENST00000445140.6	2651	16	-2	608	-1	2	multi-exon	FALSE	canonical	1	306156	junction_5	374887.157266942	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	17	1636	25.0	-1	True	ATTAAA	-18
PB.8541.2	chr3	+	2148	17	full-splice_match	FXR1	ENST00000357559.8	8711	17	360	6203	-9	-3	multi-exon	FALSE	canonical	1	306156	junction_5	356383.18437050114	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	25	1890	30.0	-9	True	ATTAAA	-21
PB.8541.1	chr3	+	2132	15	full-splice_match	FXR1	ENST00000472339.5	2130	15	-9	7	-2	1	multi-exon	FALSE	canonical	1	306156	junction_5	366679.32011425745	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	18	1724	25.0	-2	True	ATTAAA	-17
PB.8541.7	chr3	+	3956	15	novel_in_catalog	FXR1	novel	570	5	NA	NA	-9	2	intron_retention	TRUE	canonical	1	306156	junction_5	374951.8951836028	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	25	1662	25.0	-9	True	ATTAAA	-18
PB.8541.6	chr3	+	2758	17	full-splice_match	FXR1	ENST00000357559.8	8711	17	360	5593	-9	5	multi-exon	FALSE	canonical	1	306156	junction_5	356383.18437050114	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	25	1890	25.0	-9	True	AATAAA	-21
PB.8541.5	chr3	+	2656	16	full-splice_match	FXR1	ENST00000445140.6	2651	16	0	-5	0	5	multi-exon	FALSE	canonical	1	306156	junction_5	374887.157266942	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	15	1634	25.0	1	True	AATAAA	-21
PB.8541.4	chr3	+	2750	15	full-splice_match	FXR1	ENST00000472339.5	2130	15	-13	-607	-6	5	multi-exon	FALSE	canonical	1	306156	junction_5	366679.32011425745	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	22	1728	25.0	-6	True	AATAAA	-21
PB.5262.2	chr17	+	3625	9	novel_in_catalog	TEN1	novel	994	4	NA	NA	11	5411	intron_retention	FALSE	canonical	1	96321	junction_6	100648.82675887235	NA	0	NA	TRUE	NA	NA	NA	A	coding	265	798	2254	3051	10.0	12	True	AATAAA	-20
PB.8541.9	chr3	+	1953	17	full-splice_match	FXR1	ENST00000357559.8	8711	17	364	6394	-5	-19	multi-exon	FALSE	canonical	1	306156	junction_5	356383.18437050114	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	21	1886	45.0	-5	True	NA	NA
PB.8541.8	chr3	+	2231	16	novel_in_catalog	FXR1	novel	570	5	NA	NA	-8	2	intron_retention	FALSE	canonical	1	306156	junction_5	347283.794675613	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	24	1976	25.0	-8	True	ATTAAA	-18
PB.1880.1	chr11	+	2486	10	full-splice_match	TCP11L1	ENST00000334274.8	2817	10	330	1	-39	-1	multi-exon	FALSE	canonical	1	65720	junction_1	46913.070592793694	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	71	1600	35.0	1	True	ATTAAA	-13
PB.1880.2	chr11	+	1838	10	full-splice_match	TCP11L1	ENST00000334274.8	2817	10	201	778	31	-60	multi-exon	FALSE	canonical	1	65720	junction_1	46913.070592793694	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	200	1729	45.0	46	True	NA	NA
PB.10132.2	chr6	+	1868	5	incomplete-splice_match	PRDM1	ENST00000369096.8	5164	7	16	4128	16	772	3prime_fragment	TRUE	canonical	1	63147	junction_3	26655.821234535244	NA	0	NA	TRUE	NA	NA	NA	B	coding	550	1650	219	1868	70.0	0	True	NA	NA
PB.6375.18	chr2	-	3412	18	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	3	-34	intron_retention	FALSE	canonical	1	74792	junction_17	122237.13299013136	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	51	2441	25.0	-1	True	AGTAAA	-20
PB.6375.19	chr2	-	2932	19	novel_not_in_catalog	GTF3C2	novel	3992	19	NA	NA	-14	-34	any annotated donor/acceptor	FALSE	canonical	1	11582	junction_1	151041.03139819406	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2637	68	2704	25.0	219	False	AGTAAA	-20
PB.8546.3	chr3	-	2493	19	novel_in_catalog	MCCC1	novel	2545	19	NA	NA	5	0	intron_retention	FALSE	canonical	1	2576	junction_13	87635.84466241222	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	740	2275	20.0	6	True	AATAAA	-26
PB.9719.19	chr6	-	1660	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	9	8000	0	-461	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	2	NA	TRUE	NA	NA	NA	C	coding	286	861	79	939	5.0	0	True	AAAAAG	-25
PB.9719.18	chr6	-	2067	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	-11	7613	2	-74	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	99	959	40.0	-20	True	ATTAAA	-12
PB.9719.15	chr6	-	2476	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	-2	7195	-2	344	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	90	950	35.0	-11	True	TATAAA	-12
PB.9719.14	chr6	-	2680	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	17	6972	-2	-545	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	71	931	30.0	8	True	NA	NA
PB.9719.17	chr6	-	2214	7	novel_in_catalog	SSR1	novel	1808	10	NA	NA	-3	175	no_combination_of_known_junctions	FALSE	canonical	1	20355	junction_1	542015.4929801105	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	91	927	75.0	-12	True	NA	NA
PB.4311.5	chr16	-	3840	10	full-splice_match	EARS2	ENST00000563459.5	3840	10	0	0	0	0	multi-exon	FALSE	canonical	1	42688	junction_1	75804.92906935456	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	8	1579	35.0	-1	True	NA	NA
PB.1742.6	chr11	-	1803	10	full-splice_match	RNH1	ENST00000438658.6	1725	10	-43	-35	-7	0	multi-exon	FALSE	canonical	1	93405	junction_9	599301.5853837751	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	240	1625	10.0	403	False	ATTAAA	-17
PB.6253.2	chr19	+	3711	3	full-splice_match	ZNF551	ENST00000282296.9	4564	3	-2	855	-2	-855	multi-exon	FALSE	canonical	1	36670	junction_1	402.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	188	2200	85.0	0	True	NA	NA
PB.6253.1	chr19	+	4564	3	full-splice_match	ZNF551	ENST00000282296.9	4564	3	-3	3	-3	-3	multi-exon	FALSE	canonical	1	36670	junction_1	402.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	670	2013	189	2201	25.0	-1	True	NA	NA
PB.8546.5	chr3	-	2380	18	novel_in_catalog	MCCC1	novel	2545	19	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1455	junction_15	89140.2072429821	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2082	81	2162	20.0	-1	True	AATAAA	-26
PB.3523.10	chr14	-	2874	9	full-splice_match	DCAF5	ENST00000341516.9	5953	9	104	2975	18	-31	multi-exon	FALSE	canonical	1	213646	junction_8	39922.01961304532	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	45	2873	70.0	-18	True	ATTAAA	-9
PB.3523.11	chr14	-	2691	9	novel_in_catalog	DCAF5	novel	5953	9	NA	NA	-18	-31	combination_of_known_junctions	FALSE	canonical	1	27331	junction_8	116714.45224858617	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	111	2690	70.0	-17	True	ATTAAA	-9
PB.3523.12	chr14	-	3769	8	novel_in_catalog	DCAF5	novel	5953	9	NA	NA	-10	-42	intron_retention	FALSE	canonical	1	213646	junction_7	39442.24212952506	NA	1	NA	TRUE	NA	NA	NA	C	coding	836	2508	1260	3767	70.0	-9	True	AAGAAA	-3
PB.8546.6	chr3	-	2347	19	novel_not_in_catalog	MCCC1	novel	2545	19	NA	NA	-18	0	intron_retention	FALSE	canonical	1	1186	junction_18	87759.37600398048	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	66	2129	20.0	3691	False	AATAAA	-26
PB.10977.3	chr8	-	5685	2	full-splice_match	PPP1R3B	ENST00000519699.1	2334	2	-52	-3299	-52	-9	multi-exon	FALSE	canonical	1	7992	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	301	1155	55.0	-51	False	AATAAA	-8
PB.8546.7	chr3	-	3034	19	novel_in_catalog	MCCC1	novel	2545	19	NA	NA	28	-1	intron_retention	FALSE	canonical	1	2852	junction_18	87468.93138026528	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	754	2817	15.0	4081	False	AATAAA	-25
PB.2895.5	chr12	-	2248	11	full-splice_match	ANAPC7	ENST00000455511.7	3045	11	53	744	12	38	multi-exon	FALSE	canonical	1	259630	junction_10	101860.27334756176	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	51	1748	35.0	-14	True	AGTAAA	-23
PB.10775.5	chr7	-	4429	11	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	63	-10	combination_of_known_junctions	FALSE	canonical	1	7785	junction_10	167687.9435206956	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	1267	1641	25.0	1350	False	AATAAA	-30
PB.9585.4	chr5	+	2300	7	novel_not_in_catalog	CNOT8	novel	485	3	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	292507.0830221704	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	232	948	20.0	0	True	AATAAA	-22
PB.2895.4	chr12	-	3100	11	novel_not_in_catalog	ANAPC7	novel	3045	11	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	244113.78052342724	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	1300	2436	15.0	-6	True	AATAAA	-16
PB.5525.2	chr18	-	1382	2	full-splice_match	LINC00909	ENST00000580048.1	3463	2	432	1649	177	-222	multi-exon	FALSE	canonical	1	4647	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	109	330	188	517	65.0	1049	False	AATAAA	-18
PB.5525.3	chr18	-	3144	1	novel_in_catalog	LINC00909	novel	423	2	NA	NA	-10	-995	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	109	330	630	959	85.0	0	True	NA	NA
PB.5525.1	chr18	-	2391	2	full-splice_match	LINC00909	ENST00000580048.1	3463	2	-10	1082	-10	293	multi-exon	FALSE	canonical	1	4647	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	630	959	70.0	0	True	NA	NA
PB.6703.1	chr2	+	1575	9	incomplete-splice_match	WASH2P	ENST00000453662.6	1684	10	6468	0	842	0	5prime_fragment	TRUE	canonical	1	6414	junction_5	109482.74488332625	NA	1	NA	TRUE	NA	NA	NA	A	coding	264	795	487	1281	35.0	NA	False	AATAAA	-12
PB.11098.10	chr8	+	2532	14	novel_not_in_catalog	TACC1	novel	5510	13	NA	NA	-272	-15	any annotated donor/acceptor	FALSE	canonical	1	211	junction_1	180713.7153186886	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	108	2438	75.0	-609	False	NA	NA
PB.8458.1	chr3	-	4488	26	full-splice_match	HLTF	ENST00000392912.6	3896	26	-24	-568	2	10	multi-exon	FALSE	canonical	1	123809	junction_1	55973.11050615644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	193	3222	20.0	-19	True	AATAAA	-24
PB.1783.8	chr11	-	3183	1	novel_in_catalog	FAM160A2	novel	3481	12	NA	NA	-12	-13688	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	118	357	1269	1625	95.0	-17	False	NA	NA
PB.11043.4	chr8	+	3310	14	novel_in_catalog	CDCA2	novel	3731	15	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1362	junction_13	48396.941785991876	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	324	1982	45.0	0	True	AATAAA	-23
PB.11043.7	chr8	+	1959	14	incomplete-splice_match	CDCA2	ENST00000330560.7	3731	15	206	4531	4	-4484	3prime_fragment	FALSE	canonical	1	128822	junction_3	21382.9337947027	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1686	272	1957	65.0	4	True	AAAAAG	-7
PB.7406.8	chr20	-	2912	12	incomplete-splice_match	DIDO1	ENST00000266070.8	8574	16	51	16422	51	-6946	3prime_fragment	FALSE	canonical	1	128548	junction_11	153496.79086865368	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2607	306	2912	60.0	-7	True	NA	NA
PB.11043.1	chr8	+	3528	15	full-splice_match	CDCA2	ENST00000330560.7	3731	15	232	-29	30	29	multi-exon	FALSE	canonical	1	128822	junction_3	20852.22559452343	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	246	3317	40.0	-4	True	ATTAAA	-18
PB.8458.2	chr3	-	5313	25	full-splice_match	HLTF	ENST00000310053.9	5317	25	6	-2	-2	2	multi-exon	FALSE	canonical	1	179363	junction_13	47611.726094447666	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	189	3218	15.0	-15	True	AATAAA	-16
PB.11043.3	chr8	+	3583	14	full-splice_match	CDCA2	ENST00000380665.3	3565	14	23	-41	23	-6	multi-exon	FALSE	canonical	1	128822	junction_2	21632.563486148574	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	381	3407	55.0	-11	True	AATAAA	-23
PB.1033.3	chr1	-	1531	2	full-splice_match	PHLDA3	ENST00000367311.4	2640	2	-4	1113	-4	357	multi-exon	FALSE	canonical	1	633388	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	127	384	403	786	30.0	-1	True	AATGAA	-26
PB.1783.1	chr11	-	3396	12	full-splice_match	FAM160A2	ENST00000449352.6	3354	12	-42	0	5	0	multi-exon	FALSE	canonical	1	147004	junction_11	36079.66920694596	NA	1	NA	TRUE	NA	NA	NA	C	coding	935	2808	418	3225	10.0	0	True	TATAAA	-24
PB.1783.2	chr11	-	5866	11	novel_not_in_catalog	FAM160A2	novel	3354	12	NA	NA	17	0	intron_retention	TRUE	canonical	1	36381	junction_2	60631.073383950585	NA	3	NA	TRUE	NA	NA	NA	C	coding	801	2406	406	2811	10.0	-11	True	TATAAA	-24
PB.1783.3	chr11	-	5878	11	novel_in_catalog	FAM160A2	novel	3354	12	NA	NA	-21	-3	intron_retention	FALSE	canonical	1	147004	junction_10	35616.7793569267	NA	1	NA	TRUE	NA	NA	NA	C	coding	801	2406	444	2849	10.0	-26	False	TATAAA	-21
PB.1783.4	chr11	-	3434	12	full-splice_match	FAM160A2	ENST00000265978.8	3481	12	52	-5	4	5	multi-exon	FALSE	canonical	1	60078	junction_4	53034.46186978974	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	419	3268	10.0	-1	True	TATAAA	-19
PB.1783.5	chr11	-	3336	12	novel_not_in_catalog	FAM160A2	novel	3354	12	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	7677	junction_11	64940.45338056031	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2919	258	3176	10.0	2	True	TATAAA	-13
PB.1783.6	chr11	-	3411	12	novel_not_in_catalog	FAM160A2	novel	3354	12	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	36381	junction_2	58226.33506036579	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	421	2742	10.0	-3	True	TATAAA	-13
PB.1783.7	chr11	-	3289	9	full-splice_match	FAM160A2	ENST00000524416.1	3327	9	32	6	-15	-6	multi-exon	FALSE	canonical	1	147004	junction_8	38877.4477935152	NA	1	NA	TRUE	NA	NA	NA	C	coding	801	2406	391	2796	85.0	4	True	NA	NA
PB.11209.9	chr8	-	2404	9	novel_in_catalog	IMPA1	novel	2690	9	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	1	11676	junction_8	133135.17744846543	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	106	879	30.0	16	True	AATAAA	-12
PB.11209.8	chr8	-	2211	8	novel_in_catalog	IMPA1	novel	2690	9	NA	NA	-9	9	no_combination_of_known_junctions	FALSE	canonical	1	407	junction_7	109872.81845639084	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	69	812	30.0	32	True	AATAAA	-14
PB.2041.1	chr11	+	1582	10	full-splice_match	TM7SF2	ENST00000279263.11	1722	10	18	122	0	-1	multi-exon	FALSE	canonical	1	223497	junction_2	192843.85455928833	NA	0	NA	TRUE	NA	NA	NA	A	coding	418	1257	145	1401	10.0	0	True	AATGAA	-19
PB.11069.1	chr8	+	2797	1	intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	107	324	754	1077	45.0	NA	False	AATAAA	-27
PB.11209.3	chr8	-	2668	9	full-splice_match	IMPA1	ENST00000256108.9	2690	9	369	-347	4	347	multi-exon	FALSE	canonical	1	195135	junction_8	55277.107326264595	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	98	931	10.0	0	True	NA	NA
PB.7393.2	chr20	-	3385	15	novel_not_in_catalog	TAF4	novel	532	3	NA	NA	-56	-2	any annotated donor/acceptor	FALSE	canonical	1	5627	junction_14	74780.24244970549	NA	0	NA	TRUE	NA	NA	NA	A	coding	631	1896	122	2017	10.0	14	True	ATTAAA	-15
PB.11209.4	chr8	-	2234	8	full-splice_match	IMPA1	ENST00000311489.8	1106	8	-23	-1105	4	22	multi-exon	FALSE	canonical	1	24133	junction_2	100118.018771929	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	98	694	30.0	0	True	AATAAA	-27
PB.11209.7	chr8	-	2541	10	full-splice_match	IMPA1	ENST00000449740.6	1180	10	-46	-1315	-1	14	multi-exon	FALSE	canonical	1	11676	junction_9	119301.80234934621	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	127	1137	35.0	-5	True	AATAAA	-19
PB.11209.6	chr8	-	2310	9	full-splice_match	IMPA1	ENST00000256108.9	2690	9	364	16	-1	-16	multi-exon	FALSE	canonical	1	195135	junction_8	55277.107326264595	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	103	936	55.0	-5	True	ATTAAA	-18
PB.5074.1	chr17	+	3328	6	novel_in_catalog	SP2	novel	265	2	NA	NA	4	-2	intron_retention	FALSE	canonical	1	172478	junction_1	24154.16677428555	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	102	1652	15.0	-434	False	AATAAA	-26
PB.2631.2	chr12	+	6651	31	full-splice_match	ESPL1	ENST00000552462.1	6447	31	-44	-160	-8	-1	multi-exon	FALSE	canonical	1	23550	junction_1	51147.17376599501	NA	1	NA	TRUE	NA	NA	NA	C	coding	2120	6363	129	6491	20.0	-8	True	AATAAA	-12
PB.5074.3	chr17	+	2882	7	full-splice_match	SP2	ENST00000376741.4	3112	7	85	145	-1	-145	multi-exon	FALSE	canonical	1	172478	junction_1	22799.112621620458	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	74	1894	15.0	-1	True	ATTAAA	-17
PB.2332.23	chr11	+	3523	25	full-splice_match	SORL1	ENST00000534286.5	3501	25	-22	0	-22	0	multi-exon	FALSE	canonical	1	941	junction_1	123132.1458836036	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	208	3408	90.0	15	True	TTTAAA	-42
PB.2332.24	chr11	+	3185	23	incomplete-splice_match	SORL1	ENST00000534286.5	3501	25	6615	0	6615	0	5prime_fragment	FALSE	canonical	1	296755	junction_2	86483.14138993499	NA	5	NA	TRUE	NA	NA	NA	C	coding	936	2811	260	3070	90.0	-6943	False	TTTAAA	-42
PB.2332.25	chr11	+	2966	20	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	-1421	0	any annotated donor/acceptor	FALSE	canonical	1	11767	junction_1	127121.55619827611	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	503	2851	90.0	8	True	TTTAAA	-42
PB.2332.27	chr11	+	2679	19	full-splice_match	SORL1	ENST00000527934.1	3032	19	347	6	347	0	multi-exon	FALSE	canonical	1	14342	junction_1	130101.60226327814	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	75	2564	90.0	370	False	TTTAAA	-42
PB.188.1	chr1	-	2152	3	full-splice_match	AUNIP	ENST00000374298.3	2116	3	-36	0	10	0	multi-exon	FALSE	canonical	1	52915	junction_2	19718.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	357	1074	92	1165	25.0	-63	True	AATAAA	-14
PB.10859.4	chr7	+	2767	1	novel_in_catalog	AGBL3	novel	3533	17	NA	NA	315	1321	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	411	False	AATAAA	-19
PB.504.2	chr1	-	2683	11	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	-1	1	no_combination_of_known_junctions	TRUE	canonical	1	1334	junction_5	34364.62431338367	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	243	1580	25.0	-6	True	AATAAA	-20
PB.10859.3	chr7	+	2773	3	novel_in_catalog	AGBL3	novel	3533	17	NA	NA	-1	5	no_combination_of_known_junctions	FALSE	canonical	1	2435	junction_2	6802.5	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	4	True	NA	NA
PB.8241.2	chr3	+	2657	6	full-splice_match	CHMP2B	ENST00000263780.8	2557	6	25	-125	1	76	multi-exon	FALSE	canonical	1	424349	junction_1	103657.37748293654	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	214	855	55.0	-2	True	GATAAA	-18
PB.8241.3	chr3	+	2457	5	full-splice_match	CHMP2B	ENST00000471660.5	2528	5	21	50	7	-1	multi-exon	FALSE	canonical	1	13229	junction_1	273726.6379935464	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	263	781	5.0	-20	True	AATAAA	-26
PB.8241.4	chr3	+	1960	6	full-splice_match	CHMP2B	ENST00000263780.8	2557	6	22	575	-2	-575	multi-exon	FALSE	canonical	1	424349	junction_1	103657.37748293654	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	217	858	35.0	-5	True	AATAAA	-24
PB.8241.5	chr3	+	1855	5	full-splice_match	CHMP2B	ENST00000471660.5	2528	5	36	637	-2	-588	multi-exon	FALSE	canonical	1	13229	junction_1	273726.6379935464	NA	3	NA	TRUE	NA	NA	NA	C	coding	172	519	248	766	50.0	-5	True	AATAAA	-35
PB.8241.6	chr3	+	1250	6	full-splice_match	CHMP2B	ENST00000263780.8	2557	6	23	1284	-1	-9	multi-exon	FALSE	canonical	1	424349	junction_1	103657.37748293654	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	216	857	15.0	-4	True	ATTAAA	-12
PB.10859.2	chr7	+	1883	2	novel_in_catalog	AGBL3	novel	3533	17	NA	NA	2	1321	intron_retention	FALSE	canonical	1	26155	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	42	True	AATAAA	-19
PB.9874.28	chr6	-	4059	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	2	-9	intron_retention	FALSE	canonical	1	559348	junction_11	480512.7836616272	NA	2	NA	TRUE	NA	NA	NA	C	coding	593	1782	2185	3966	10.0	-5	True	AATAAA	-21
PB.5518.1	chr18	-	2457	1	novel_in_catalog	CD226	novel	474	4	NA	NA	40078	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-14
PB.10859.1	chr7	+	3386	1	genic	AGBL3	novel	NA	NA	NA	NA	-13	1516	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-13	True	AATAAA	-13
PB.9874.20	chr6	-	3643	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	64467	junction_24	538452.1510377312	NA	2	NA	TRUE	NA	NA	NA	C	coding	1126	3381	162	3542	25.0	0	True	AATAAA	-29
PB.9874.21	chr6	-	3532	23	novel_in_catalog	BAG6	novel	488	2	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	97477	junction_19	591859.8294942187	NA	0	NA	TRUE	NA	NA	NA	C	coding	1059	3180	252	3431	25.0	-1	True	AATAAA	-29
PB.9874.22	chr6	-	3511	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	64467	junction_23	559630.4316715087	NA	1	NA	TRUE	NA	NA	NA	C	coding	1077	3234	177	3410	25.0	8093	False	AATAAA	-29
PB.9874.23	chr6	-	3438	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	1	436020	junction_23	524540.6159796386	NA	3	1	TRUE	NA	NA	NA	C	coding	1077	3234	104	3337	25.0	-7	True	AATAAA	-29
PB.9874.24	chr6	-	3412	23	novel_in_catalog	BAG6	novel	488	2	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	97477	junction_19	648301.3410675051	NA	23	4	TRUE	NA	NA	NA	C	coding	1058	3177	135	3311	25.0	8401	False	AATAAA	-29
PB.9874.27	chr6	-	3797	26	novel_in_catalog	BAG6	novel	488	2	NA	NA	-7	-39	combination_of_known_junctions	FALSE	canonical	1	559348	junction_11	514219.471406152	NA	1	NA	TRUE	NA	NA	NA	C	coding	1162	3489	246	3734	50.0	5	True	NA	NA
PB.6474.4	chr2	-	2884	2	full-splice_match	CCDC88A	ENST00000642784.1	1270	2	-260	-1354	-26	-15	multi-exon	FALSE	canonical	1	240364	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	21	False	NA	NA
PB.6474.1	chr2	-	2736	15	incomplete-splice_match	CCDC88A	ENST00000644630.1	2971	16	-44	550	-2	-42	intron_retention	TRUE	canonical	1	142873	junction_11	56583.35675652987	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	802	2736	70.0	-44	True	AAAAAG	-18
PB.6474.2	chr2	-	2633	15	incomplete-splice_match	CCDC88A	ENST00000644630.1	2971	16	-51	660	1	-6	intron_retention	FALSE	canonical	1	142873	junction_11	56583.35675652987	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1824	809	2632	80.0	-51	True	AAGAAA	-31
PB.6474.3	chr2	-	1502	8	incomplete-splice_match	CCDC88A	ENST00000645031.1	1956	13	-377	20656	2	38	3prime_fragment	FALSE	canonical	1	142873	junction_4	31781.382161926955	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	705	798	1502	20.0	-40	True	NA	NA
PB.9181.4	chr5	-	2291	3	full-splice_match	AC008957.1	ENST00000512329.1	681	3	-12	-1598	7	1598	multi-exon	FALSE	canonical	1	5199	junction_1	11721.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-3	True	ATTAAA	-18
PB.9181.1	chr5	-	3992	3	full-splice_match	AC008957.1	ENST00000508745.1	589	3	-36	-3367	-36	3215	multi-exon	FALSE	canonical	1	17502	junction_1	5570.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-46	False	NA	NA
PB.9181.2	chr5	-	3922	3	full-splice_match	AC008957.1	ENST00000512329.1	681	3	-26	-3215	-7	3215	multi-exon	FALSE	canonical	1	5199	junction_1	11721.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-17	True	NA	NA
PB.9181.3	chr5	-	2354	3	full-splice_match	AC008957.1	ENST00000508745.1	589	3	-15	-1750	-15	1598	multi-exon	FALSE	canonical	1	17502	junction_1	5570.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-25	True	ATTAAA	-18
PB.1017.2	chr1	-	5453	4	antisense	novelGene_CFHR4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	874	junction_3	153.24127671384394	NA	4	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-47	False	AATAAA	-15
PB.1017.3	chr1	-	3593	3	antisense	novelGene_CFHR4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1195	junction_1	678.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	12	True	AATAAA	-16
PB.7109.2	chr2	+	2163	2	full-splice_match	ANO7	ENST00000487192.1	2196	2	26	7	26	-7	multi-exon	FALSE	canonical	1	65041	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	14	45	299	343	15.0	3	True	NA	NA
PB.3117.1	chr13	-	3428	2	incomplete-splice_match	LHFPL6	ENST00000495922.1	446	3	309	-3013	7	3013	5prime_fragment	FALSE	canonical	1	166751	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	130	393	512	904	75.0	-8	True	TTTAAA	-45
PB.4000.10	chr15	+	2612	6	full-splice_match	FBXO22	ENST00000569022.1	2164	6	52	-500	-28	317	multi-exon	FALSE	canonical	1	40053	junction_1	181022.54851216738	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	208	1107	20.0	-6	True	GATAAA	-16
PB.5046.2	chr17	-	4327	15	full-splice_match	KIF18B	ENST00000587309.5	4217	15	-112	2	-38	-2	multi-exon	FALSE	canonical	1	91070	junction_12	39734.741910048484	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	137	2638	5.0	23	True	NA	NA
PB.5046.3	chr17	-	4083	16	novel_in_catalog	KIF18B	novel	4217	15	NA	NA	-21	-2	combination_of_known_junctions	TRUE	canonical	1	46375	junction_1	46084.511838143626	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	120	2714	5.0	40	True	NA	NA
PB.5046.1	chr17	-	4301	15	novel_not_in_catalog	KIF18B	novel	4217	15	NA	NA	-39	-2	intron_retention	FALSE	canonical	1	28725	junction_3	50265.79208993499	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	138	2612	5.0	22	True	NA	NA
PB.2140.4	chr11	-	7245	27	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	4	0	intron_retention	FALSE	canonical	1	25150	junction_25	445825.7480024414	NA	1	NA	TRUE	NA	NA	NA	C	coding	2101	6306	278	6583	25.0	22	True	AATAAA	-19
PB.2140.5	chr11	-	7196	26	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	-29	0	intron_retention	FALSE	canonical	1	182511	junction_24	403192.2350771671	NA	0	NA	TRUE	NA	NA	NA	C	coding	2101	6306	229	6534	25.0	109	False	AATAAA	-19
PB.2140.6	chr11	-	7205	25	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	-26	0	intron_retention	FALSE	canonical	1	197857	junction_24	375339.9111587403	NA	0	NA	TRUE	NA	NA	NA	C	coding	2101	6306	238	6543	25.0	985	False	AATAAA	-19
PB.2140.7	chr11	-	7188	27	full-splice_match	NUMA1	ENST00000393695.7	7343	27	154	1	3	0	multi-exon	FALSE	canonical	1	182511	junction_25	403123.5405493934	NA	0	NA	TRUE	NA	NA	NA	C	coding	2115	6348	179	6526	25.0	0	True	AATAAA	-19
PB.2140.3	chr11	-	7223	26	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	197857	junction_25	377776.4186445015	NA	0	NA	TRUE	NA	NA	NA	C	coding	2115	6348	214	6561	25.0	1009	False	AATAAA	-19
PB.2140.8	chr11	-	3657	11	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	481	0	intron_retention	FALSE	canonical	1	539683	junction_10	356472.19610119663	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	235	687	25.0	NA	False	AATAAA	-19
PB.2140.9	chr11	-	8395	25	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	6	0	intron_retention	FALSE	canonical	1	182511	junction_23	411391.3267952138	NA	1	NA	TRUE	NA	NA	NA	C	coding	1749	5250	176	5425	25.0	3	True	AATAAA	-19
PB.10452.1	chr7	-	2242	2	full-splice_match	HOXA1	ENST00000643460.1	2211	2	-22	-9	-14	9	multi-exon	FALSE	canonical	1	22246	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	335	1008	99	1106	25.0	-23	True	AATAAA	-23
PB.1480.1	chr10	-	5031	10	full-splice_match	AP3M1	ENST00000372745.1	2320	10	-1	-2710	-1	1	multi-exon	TRUE	canonical	1	199131	junction_9	151848.36486914207	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	219	1475	20.0	-24	True	AATAAA	-19
PB.1480.2	chr10	-	5129	9	full-splice_match	AP3M1	ENST00000355264.8	5124	9	-8	3	-8	-3	multi-exon	FALSE	canonical	1	145119	junction_8	146640.08433017	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	321	1577	25.0	-34	False	AATAAA	-15
PB.1480.3	chr10	-	3903	10	full-splice_match	AP3M1	ENST00000372745.1	2320	10	16	-1599	16	-1110	multi-exon	FALSE	canonical	1	199131	junction_9	151848.36486914207	NA	3	NA	TRUE	NA	NA	NA	C	coding	418	1257	202	1458	20.0	-7	True	AGTAAA	-17
PB.1480.4	chr10	-	3433	10	novel_not_in_catalog	AP3M1	novel	5124	9	NA	NA	40	1205	any annotated donor/acceptor	FALSE	canonical	1	1799	junction_8	200259.2137693199	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	471	1382	20.0	17	True	AATAAA	-21
PB.1480.5	chr10	-	3518	10	novel_not_in_catalog	AP3M1	novel	5124	9	NA	NA	41	1204	any annotated donor/acceptor	FALSE	canonical	1	3799	junction_8	233293.27567873357	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	212	1468	20.0	18	True	AATAAA	-20
PB.4310.28	chr16	-	3765	16	novel_in_catalog	GGA2	novel	5973	17	NA	NA	0	-1	intron_retention	FALSE	canonical	1	350013	junction_15	126679.40728282908	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	1187	2767	15.0	1	True	AATAAA	-17
PB.1480.8	chr10	-	3355	9	full-splice_match	AP3M1	ENST00000355264.8	5124	9	240	1529	19	1180	multi-exon	FALSE	canonical	1	145119	junction_8	146640.08433017	NA	8	1	TRUE	NA	NA	NA	C	coding	418	1257	73	1329	65.0	-4	True	AGTAAA	-30
PB.4310.27	chr16	-	3906	17	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	11943	junction_11	221998.07277819864	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	1808	2908	15.0	0	True	AATAAA	-17
PB.4310.24	chr16	-	3061	18	novel_not_in_catalog	GGA2	novel	5973	17	NA	NA	-2	0	intron_retention	FALSE	canonical	1	11943	junction_11	215370.76521977043	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	961	2061	20.0	3	True	AATAAA	-19
PB.4310.25	chr16	-	3053	17	novel_in_catalog	GGA2	novel	5973	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	5136	junction_14	186865.36601918607	NA	1	NA	TRUE	NA	NA	NA	C	coding	656	1971	84	2054	20.0	-1	True	AATAAA	-18
PB.4310.22	chr16	-	5506	15	novel_in_catalog	GGA2	novel	5973	17	NA	NA	-2	426	intron_retention	FALSE	canonical	1	350013	junction_14	124277.49629989908	NA	2	NA	TRUE	NA	NA	NA	C	coding	526	1581	2500	4080	20.0	3	True	NA	NA
PB.4310.23	chr16	-	2941	17	full-splice_match	GGA2	ENST00000309859.8	5973	17	-18	3050	-18	-1	multi-exon	FALSE	canonical	1	350013	junction_16	124237.22461080694	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	102	1943	15.0	-19	False	AATAAA	-17
PB.3571.3	chr14	-	4218	5	novel_in_catalog	TMED10	novel	4127	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	7768	junction_1	556800.3144002233	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	47	625	20.0	-23	True	AATAAA	-15
PB.3571.2	chr14	-	4098	5	full-splice_match	TMED10	ENST00000303575.8	4127	5	24	5	5	-5	multi-exon	FALSE	canonical	1	829033	junction_3	295970.3156779409	NA	57	NA	TRUE	NA	NA	NA	C	coding	219	660	29	688	30.0	-5	True	AATAAA	-10
PB.3571.7	chr14	-	3399	2	novel_not_in_catalog	TMED10	novel	4127	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-10	True	AATAAA	-15
PB.3571.5	chr14	-	3916	4	full-splice_match	TMED10	ENST00000557670.5	917	4	-113	-2886	-113	0	multi-exon	FALSE	canonical	1	3324	junction_3	702855.1772084109	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-114	False	AATAAA	-15
PB.3571.4	chr14	-	3994	5	novel_not_in_catalog	TMED10	novel	4127	5	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	613376.2372241445	NA	3	1	TRUE	NA	NA	NA	C	coding	116	351	229	579	20.0	-41	False	AATAAA	-15
PB.3571.8	chr14	-	2997	6	novel_not_in_catalog	TMED10	novel	4127	5	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	582678.7136956352	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	36	695	20.0	-12	True	AATAAA	-15
PB.11703.7	chr9	+	2096	5	novel_in_catalog	TMEM38B	novel	502	3	NA	NA	-1	1221	no_combination_of_known_junctions	FALSE	canonical	1	8897	junction_4	116215.32827794275	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	209	661	80.0	1	True	TATAAA	-19
PB.11137.2	chr8	+	3468	13	novel_not_in_catalog	TGS1	novel	3782	13	NA	NA	-34	-2	any annotated donor/acceptor	FALSE	canonical	1	8632	junction_6	77300.69669461086	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	184	2727	25.0	-34	True	ATTAAA	-15
PB.859.5	chr1	-	3223	4	novel_not_in_catalog	CD48	novel	1126	4	NA	NA	12	-3	any annotated donor/acceptor	FALSE	canonical	1	12886	junction_3	923732.6494126366	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	215	877	25.0	-1	True	AATAAA	-26
PB.8945.3	chr4	-	6208	27	novel_in_catalog	ZGRF1	novel	6529	27	NA	NA	0	-177	no_combination_of_known_junctions	FALSE	canonical	1	23007	junction_17	22262.80601702039	NA	0	NA	TRUE	NA	NA	NA	B	coding	2013	6039	169	6207	75.0	-11	True	NA	NA
PB.8945.2	chr4	-	6469	27	novel_in_catalog	ZGRF1	novel	6529	27	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	23007	junction_17	22262.80601702039	NA	0	NA	TRUE	NA	NA	NA	B	coding	2032	6099	168	6266	35.0	-10	True	AATAAA	-16
PB.8945.1	chr4	-	6616	27	novel_in_catalog	ZGRF1	novel	6529	27	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	21836	junction_26	22662.578032059184	NA	0	NA	TRUE	NA	NA	NA	B	coding	2032	6099	315	6413	35.0	-1	True	AATAAA	-16
PB.8945.4	chr4	-	3489	10	novel_not_in_catalog	ZGRF1	novel	6529	27	NA	NA	16	1291	any annotated donor/acceptor	FALSE	canonical	1	2809	junction_1	16480.43861186668	NA	0	NA	TRUE	NA	NA	NA	B	coding	949	2850	141	2990	10.0	17	True	AATAAA	-14
PB.672.1	chr1	+	1978	15	full-splice_match	GPR89A	ENST00000534502.5	1644	15	-58	-276	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	402	1209	350	1558	20.0	NA	False	ATTAAA	-13
PB.12242.1	chrX	-	1573	9	full-splice_match	NKAP	ENST00000371410.4	5963	9	11	4379	11	0	multi-exon	TRUE	canonical	1	227484	junction_8	41982.42778234722	NA	0	NA	TRUE	NA	NA	NA	A	coding	415	1248	157	1404	20.0	-13	True	AATAAA	-24
PB.13.1	chr1	-	2385	8	full-splice_match	UBE2J2	ENST00000464036.5	1256	8	11	-1140	0	1	multi-exon	FALSE	canonical	1	23707	junction_4	318142.90341689315	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	548	1090	5.0	-21	True	AAAAAG	-32
PB.11221.9	chr8	+	4940	17	novel_in_catalog	CPNE3	novel	4865	17	NA	NA	-1	1	no_combination_of_known_junctions	FALSE	canonical	1	805	junction_1	192119.1345797901	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	238	1851	20.0	-2	True	AATAAA	-21
PB.11221.8	chr8	+	2030	17	full-splice_match	CPNE3	ENST00000517490.5	4865	17	9	2826	-1	-2739	multi-exon	FALSE	canonical	1	315722	junction_2	88733.99168756352	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	155	1768	20.0	-2	True	AGTAAA	-29
PB.11221.7	chr8	+	4820	16	novel_in_catalog	CPNE3	novel	4865	17	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	12849	junction_1	148596.42701521757	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	116	1729	30.0	-1	True	AATAAA	-23
PB.60.1	chr1	-	4165	15	novel_in_catalog	DNAJC11	novel	3014	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	346547	junction_6	110822.6636134164	NA	15	3	TRUE	NA	NA	NA	C	coding	280	843	1817	2659	5.0	-15	True	AATAAA	-17
PB.11221.5	chr8	+	4857	17	full-splice_match	CPNE3	ENST00000517490.5	4865	17	9	-1	-1	1	multi-exon	FALSE	canonical	1	315722	junction_2	88733.99168756352	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	155	1768	20.0	-2	True	AATAAA	-21
PB.11221.4	chr8	+	5093	17	novel_not_in_catalog	CPNE3	novel	4865	17	NA	NA	-2	3	any annotated donor/acceptor	FALSE	canonical	1	7476	junction_1	153123.33542641165	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	476	2089	20.0	-3	True	GATAAA	-19
PB.11221.3	chr8	+	2714	17	full-splice_match	CPNE3	ENST00000517490.5	4865	17	8	2143	-2	-2056	multi-exon	FALSE	canonical	1	315722	junction_2	88733.99168756352	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	156	1769	55.0	-3	True	AATGAA	-13
PB.11221.1	chr8	+	4977	18	novel_in_catalog	CPNE3	novel	4865	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4539	junction_3	186400.50659661324	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	276	1889	20.0	-2	True	AATAAA	-20
PB.6756.3	chr2	+	4647	25	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	52268	junction_3	116915.20264407684	NA	1	NA	TRUE	NA	NA	NA	C	coding	1083	3252	424	3675	20.0	-32	True	AATAAA	-10
PB.6756.2	chr2	+	4266	23	novel_not_in_catalog	R3HDM1	novel	539	3	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	16461	junction_12	104592.04178136021	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	427	3288	5.0	-35	True	AATAAA	-16
PB.6756.1	chr2	+	4573	24	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	8	4	combination_of_known_junctions	FALSE	canonical	1	75313	junction_13	104310.10657975827	NA	0	NA	TRUE	NA	NA	NA	C	coding	1054	3165	427	3591	15.0	-35	True	AATAAA	-20
PB.6756.7	chr2	+	4372	24	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	24304	junction_13	109091.58396687049	NA	0	NA	TRUE	NA	NA	NA	C	coding	992	2979	415	3393	10.0	-23	True	AATAAA	-17
PB.6756.6	chr2	+	4393	24	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	52268	junction_3	104549.3689867129	NA	0	NA	TRUE	NA	NA	NA	C	coding	999	3000	415	3414	10.0	-23	True	AATAAA	-17
PB.6756.5	chr2	+	4162	22	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	7760	junction_19	108545.7004031021	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	416	2869	15.0	-24	True	AATAAA	-20
PB.6756.4	chr2	+	4352	24	novel_not_in_catalog	R3HDM1	novel	539	3	NA	NA	-4	2	any annotated donor/acceptor	FALSE	canonical	1	16461	junction_13	115498.78641634464	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	421	3372	15.0	-29	True	AATAAA	-18
PB.6654.12	chr2	-	2542	6	novel_not_in_catalog	REV1	novel	4686	23	NA	NA	-1	1062	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45445.94326625865	NA	16	1	TRUE	NA	NA	NA	C	coding	251	756	727	1482	25.0	-37	True	NA	NA
PB.6654.13	chr2	-	2651	7	incomplete-splice_match	REV1	ENST00000413697.5	4727	23	19	36580	19	1044	3prime_fragment	FALSE	canonical	1	15798	junction_4	78327.84064093827	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	581	1609	40.0	-17	True	NA	NA
PB.6654.10	chr2	-	3220	18	novel_in_catalog	REV1	novel	4686	23	NA	NA	19	-13	no_combination_of_known_junctions	FALSE	canonical	1	2809	junction_17	75365.70854859086	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3045	176	3220	80.0	-17	True	NA	NA
PB.6654.11	chr2	-	3040	6	incomplete-splice_match	REV1	ENST00000258428.7	4751	23	-3	36531	-3	-1169	3prime_fragment	FALSE	canonical	1	90452	junction_5	50614.931004991005	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	233	1474	95.0	-39	True	NA	NA
PB.6654.16	chr2	-	2393	6	incomplete-splice_match	REV1	ENST00000258428.7	4751	23	5	37170	5	929	3prime_fragment	FALSE	canonical	1	90452	junction_5	50614.931004991005	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	225	1466	35.0	-31	True	AATAAA	-24
PB.4651.6	chr17	-	7215	43	novel_not_in_catalog	PRPF8	novel	380	2	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_36	536193.860704023	NA	19	4	TRUE	NA	NA	NA	C	coding	2299	6900	144	7043	10.0	-75	False	AATAAA	-29
PB.4651.5	chr17	-	7300	43	novel_not_in_catalog	PRPF8	novel	380	2	NA	NA	-21	-1	any annotated donor/acceptor	FALSE	canonical	1	29743	junction_42	520347.9273035362	NA	2	1	TRUE	NA	NA	NA	C	coding	2335	7008	121	7128	10.0	-67	False	AATAAA	-29
PB.6654.15	chr2	-	2519	7	incomplete-splice_match	REV1	ENST00000413697.5	4727	23	36	36695	-26	929	3prime_fragment	FALSE	canonical	1	15798	junction_4	78327.84064093827	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	564	1592	35.0	0	True	AATAAA	-24
PB.6635.3	chr2	+	2759	18	novel_not_in_catalog	NCAPH	novel	2763	18	NA	NA	-37	9	any annotated donor/acceptor	FALSE	canonical	1	15556	junction_17	88013.34087515892	NA	3	1	TRUE	NA	NA	NA	C	coding	714	2145	81	2225	55.0	1	True	AATAAA	-7
PB.2056.27	chr11	+	2008	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	3222	3478	761	-618	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-5178	False	AATAAA	-5
PB.6635.1	chr2	+	1477	11	incomplete-splice_match	NCAPH	ENST00000240423.8	2763	18	-56	13682	-56	711	3prime_fragment	FALSE	canonical	1	123415	junction_1	60909.8758941438	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1377	100	1476	70.0	-70	False	NA	NA
PB.6635.7	chr2	+	1395	11	incomplete-splice_match	NCAPH	ENST00000435975.5	1852	14	-21	5870	-7	711	3prime_fragment	FALSE	canonical	1	84738	junction_1	71128.76167409355	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1344	51	1394	70.0	-21	True	NA	NA
PB.6635.6	chr2	+	2778	18	full-splice_match	NCAPH	ENST00000240423.8	2763	18	-21	6	-21	-6	multi-exon	FALSE	canonical	1	123415	junction_1	51891.93733421	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	65	2290	35.0	-35	True	AATAAA	-22
PB.6635.5	chr2	+	2748	18	novel_in_catalog	NCAPH	novel	2763	18	NA	NA	-25	-7	combination_of_known_junctions	FALSE	canonical	1	84738	junction_1	59551.222085432564	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	69	2261	35.0	-39	True	AATAAA	-21
PB.6635.4	chr2	+	2762	18	novel_not_in_catalog	NCAPH	novel	2763	18	NA	NA	-34	13	any annotated donor/acceptor	FALSE	canonical	1	10	junction_6	86192.67034842573	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	78	2285	45.0	-48	False	AATAAA	-11
PB.9357.31	chr5	+	6200	16	novel_in_catalog	LNPEP	novel	2075	2	NA	NA	616	2846	no_combination_of_known_junctions	FALSE	canonical	1	3710	junction_14	56327.843510963176	NA	37	NA	TRUE	NA	NA	NA	C	coding	924	2775	77	2851	90.0	0	True	NA	NA
PB.6148.1	chr19	+	3935	18	novel_in_catalog	MED25	novel	1548	12	NA	NA	11	-57	intron_retention	FALSE	canonical	1	93014	junction_17	149385.31434677384	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	43	2433	15.0	11	True	NA	NA
PB.6148.2	chr19	+	2334	18	full-splice_match	MED25	ENST00000312865.10	2332	18	-3	1	-3	-1	multi-exon	FALSE	canonical	1	232756	junction_17	132373.1372650994	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	57	2300	10.0	-3	True	AATAAA	-16
PB.6148.3	chr19	+	4149	17	novel_not_in_catalog	MED25	novel	1548	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	7650	junction_11	175212.5230609245	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	54	1394	10.0	0	True	NA	NA
PB.6148.4	chr19	+	2201	17	incomplete-splice_match	MED25	ENST00000312865.10	2332	18	224	2	171	-2	5prime_fragment	FALSE	canonical	1	232756	junction_16	136402.61682784674	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	234	2168	10.0	224	False	AATAAA	-15
PB.11235.1	chr8	-	3505	1	antisense	novelGene_FAM92A_AS_novelGene_AC010834.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	ATTAAA	-36
PB.5021.1	chr17	-	2384	3	novel_not_in_catalog	LINC00910	novel	2303	6	NA	NA	7	-325	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	4883.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	99	300	1101	1400	75.0	0	True	NA	NA
PB.11548.3	chr9	-	1053	4	full-splice_match	EXOSC3	ENST00000327304.9	1806	4	2	751	2	123	multi-exon	FALSE	canonical	1	88540	junction_2	204029.46758903886	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	12	839	45.0	8	True	AATAAA	-7
PB.11548.2	chr9	-	3946	2	full-splice_match	EXOSC3	ENST00000496910.1	217	2	-321	-3408	-2	124	multi-exon	FALSE	canonical	1	578945	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	23	574	45.0	-3	True	AATAAA	-8
PB.11548.1	chr9	-	1843	4	full-splice_match	EXOSC3	ENST00000327304.9	1806	4	-30	-7	-23	7	multi-exon	FALSE	canonical	1	88540	junction_2	204029.46758903886	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	44	871	10.0	-24	False	GATAAA	-14
PB.7743.3	chr22	-	987	4	full-splice_match	TXN2	ENST00000216185.6	1736	4	391	358	-5	155	multi-exon	FALSE	canonical	1	1025518	junction_3	72464.29515285442	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	77	577	85.0	19	False	NA	NA
PB.7743.1	chr22	-	1341	4	full-splice_match	TXN2	ENST00000216185.6	1736	4	394	1	-2	-1	multi-exon	FALSE	canonical	1	1025518	junction_3	72464.29515285442	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	74	574	20.0	-20	True	AATAAA	-28
PB.10789.3	chr7	+	1714	12	full-splice_match	ZNF277	ENST00000361822.7	1849	12	102	33	-5	-31	multi-exon	FALSE	canonical	1	203528	junction_1	51524.87484412242	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	28	1380	45.0	-12	True	AAGAAA	-11
PB.10789.2	chr7	+	2595	12	full-splice_match	ZNF277	ENST00000361822.7	1849	12	83	-829	-24	829	multi-exon	FALSE	canonical	1	203528	junction_1	51524.87484412242	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	47	1399	90.0	-73	False	NA	NA
PB.10789.1	chr7	+	1607	12	full-splice_match	ZNF277	ENST00000361822.7	1849	12	64	178	-43	-105	multi-exon	FALSE	canonical	1	203528	junction_1	51524.87484412242	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	66	1418	70.0	-92	False	AATAAA	-29
PB.2056.20	chr11	+	2283	2	novel_not_in_catalog	MALAT1	novel	5340	4	NA	NA	3	-701	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	TTTAAA	-28
PB.10789.4	chr7	+	2459	11	incomplete-splice_match	ZNF277	ENST00000361946.8	1736	12	80177	-831	-50856	829	5prime_fragment	FALSE	canonical	1	251026	junction_3	42007.902825063764	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	145	1263	90.0	-1752	False	NA	NA
PB.186.1	chr1	+	4249	13	full-splice_match	SELENON	ENST00000361547.6	4334	13	83	2	66	1	multi-exon	FALSE	canonical	1	39556	junction_3	275717.3620604556	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	480	1358	20.0	-8411	False	AATAAA	-17
PB.881.1	chr1	+	4723	6	full-splice_match	FCGR2B	ENST00000480308.5	4680	6	-49	6	-4	-6	multi-exon	FALSE	canonical	1	10	junction_1	94074.67458694715	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	100	867	45.0	NA	False	AAAACA	-5
PB.7440.1	chr21	+	2397	1	intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	101	306	1088	1393	90.0	NA	False	NA	NA
PB.3228.24	chr13	+	2889	2	incomplete-splice_match	MBNL2	ENST00000449284.1	581	4	9661	-2514	9661	-6	5prime_fragment	FALSE	canonical	1	148799	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7637	False	AATAAA	-11
PB.3096.4	chr13	+	2629	11	incomplete-splice_match	BRCA2	ENST00000544455.5	10984	28	28	62883	3	3494	3prime_fragment	FALSE	canonical	1	33452	junction_10	9963.903223134997	NA	0	NA	TRUE	NA	NA	NA	B	coding	810	2430	200	2629	55.0	0	True	NA	NA
PB.3228.21	chr13	+	3740	7	novel_not_in_catalog	MBNL2	novel	4487	7	NA	NA	53944	-6	intron_retention	FALSE	canonical	1	747	junction_5	163955.22430673635	NA	2	1	TRUE	NA	NA	NA	C	coding	246	741	223	963	35.0	2	True	AATAAA	-11
PB.7406.2	chr20	-	8505	16	novel_in_catalog	DIDO1	novel	8574	16	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	126511	junction_15	140190.76816718947	NA	5	NA	TRUE	NA	NA	NA	C	coding	2240	6723	289	7011	10.0	-16	True	AATAAA	-17
PB.6389.22	chr2	+	3338	6	novel_in_catalog	PPP1CB	novel	721	5	NA	NA	-10	14	intron_retention	FALSE	canonical	1	69153	junction_5	590273.8113653357	NA	1	NA	TRUE	NA	NA	NA	C	coding	202	609	283	891	30.0	-11	True	AATAAA	-35
PB.6389.23	chr2	+	1861	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	-10	3042	-10	-1750	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	283	1266	60.0	-11	True	ATTAAA	-26
PB.6389.20	chr2	+	3488	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	-14	1419	-14	-127	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	287	1270	40.0	-15	True	ATTAAA	-19
PB.6389.21	chr2	+	2899	4	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	-13	1	intron_retention	FALSE	canonical	1	56	junction_1	834082.738666588	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-14	True	AATAAA	-22
PB.6389.24	chr2	+	4684	8	full-splice_match	PPP1CB	ENST00000395366.2	4893	8	211	-2	53	2	multi-exon	FALSE	canonical	1	991702	junction_2	406909.95523895876	NA	2	NA	TRUE	NA	NA	NA	C	coding	327	984	62	1045	20.0	-50	True	ATTAAA	-23
PB.6389.25	chr2	+	4131	4	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	50	4	intron_retention	FALSE	canonical	1	56	junction_1	834082.738666588	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-15	True	ATTAAA	-25
PB.6389.28	chr2	+	2204	4	incomplete-splice_match	PPP1CB	ENST00000296122.10	3527	9	32091	607	4905	-607	5prime_fragment	FALSE	canonical	1	1930177	junction_1	107582.72157739829	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	26	466	20.0	1388	False	AGTAAA	-19
PB.6760.1	chr2	-	1666	2	full-splice_match	CXCR4	ENST00000241393.3	1682	2	16	0	16	0	multi-exon	FALSE	canonical	1	741318	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	352	1059	90	1148	20.0	-1	True	AATAAA	-16
PB.9701.7	chr6	+	3829	10	novel_in_catalog	RIPK1	novel	1481	8	NA	NA	100	-2	no_combination_of_known_junctions	FALSE	canonical	1	6494	junction_4	74705.24436215892	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	684	1985	30.0	16	True	AATAAA	-11
PB.5812.14	chr19	+	2348	8	incomplete-splice_match	MYO9B	ENST00000595641.5	6215	38	104240	-1195	-731	0	5prime_fragment	FALSE	canonical	1	75342	junction_7	218207.58008953452	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	111	1364	20.0	-9821	False	AATAAA	-22
PB.6708.17	chr2	+	2559	13	novel_not_in_catalog	DDX18	novel	3796	14	NA	NA	62	-977	any annotated donor/acceptor	FALSE	canonical	1	8608	junction_11	140045.47739065473	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	67	1890	20.0	0	True	AATAAA	-16
PB.7403.8	chr20	+	2888	32	full-splice_match	COL9A3	ENST00000649368.1	2497	32	0	-391	0	391	multi-exon	FALSE	canonical	1	47673	junction_1	46124.37463912283	NA	4	NA	TRUE	NA	NA	NA	C	coding	684	2055	16	2070	35.0	0	True	AATAAA	-21
PB.6708.10	chr2	+	4734	13	novel_in_catalog	DDX18	novel	3796	14	NA	NA	41	-1319	intron_retention	FALSE	canonical	1	151172	junction_11	118223.9959794718	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	88	1161	15.0	-21	True	AATATA	-19
PB.9701.5	chr6	+	2665	11	full-splice_match	RIPK1	ENST00000259808.8	4160	11	93	1402	93	-1402	multi-exon	FALSE	canonical	1	32151	junction_1	54095.10886216978	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	206	2221	65.0	9	True	NA	NA
PB.6621.1	chr2	+	2248	5	full-splice_match	ZNF2	ENST00000614034.4	2601	5	353	0	2	0	multi-exon	FALSE	canonical	1	31751	junction_2	5452.710719220304	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	110	1387	30.0	-18	True	NA	NA
PB.6621.2	chr2	+	3592	5	full-splice_match	ZNF2	ENST00000614034.4	2601	5	356	-1347	5	-3	multi-exon	FALSE	canonical	1	31751	junction_2	5452.710719220304	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	107	1384	25.0	-15	True	NA	NA
PB.6621.3	chr2	+	2958	6	novel_not_in_catalog	ZNF2	novel	3885	4	NA	NA	7	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	16655.73666458497	NA	3	1	TRUE	NA	NA	NA	C	coding	425	1278	105	1382	30.0	-13	True	NA	NA
PB.5966.1	chr19	-	2294	4	full-splice_match	ZNF571	ENST00000451802.6	2265	4	-20	-9	-2	-2	multi-exon	FALSE	canonical	1	5793	junction_3	8206.595084984327	NA	0	NA	TRUE	NA	NA	NA	A	coding	609	1830	122	1951	25.0	-1	True	ATTAAA	-24
PB.6708.12	chr2	+	2426	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	41	1329	41	-1320	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	88	2100	15.0	-21	True	AATATA	-18
PB.11722.10	chr9	-	5268	15	novel_not_in_catalog	PTBP3	novel	7995	14	NA	NA	-1	-172	any annotated donor/acceptor	FALSE	canonical	0	0	junction_13	199050.49044359758	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	459	1817	30.0	-47	False	ATTAAA	-14
PB.728.6	chr1	-	2507	3	full-splice_match	ENSA	ENST00000271690.12	2818	3	-18	329	1	12	multi-exon	FALSE	canonical	1	1052	junction_1	295232.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	126	479	25.0	-19	True	NA	NA
PB.6708.13	chr2	+	2370	14	novel_in_catalog	DDX18	novel	3796	14	NA	NA	41	-1319	combination_of_known_junctions	FALSE	canonical	1	5228	junction_8	146639.74148413024	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	88	2043	15.0	-21	True	AATATA	-19
PB.7111.18	chr2	-	4453	28	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	25723	junction_2	902812.7788477434	NA	0	NA	TRUE	NA	NA	NA	C	coding	1296	3891	177	4067	15.0	-1	True	AATAAA	-23
PB.1569.2	chr10	-	4406	34	full-splice_match	RRP12	ENST00000370992.8	4425	34	19	0	19	0	multi-exon	FALSE	canonical	1	165635	junction_33	80070.32933255189	NA	0	NA	TRUE	NA	NA	NA	C	coding	1297	3894	121	4014	25.0	-56	False	AATAAA	-16
PB.1569.3	chr10	-	4171	32	novel_in_catalog	RRP12	novel	1919	9	NA	NA	30	-1	no_combination_of_known_junctions	FALSE	canonical	1	463	junction_28	94737.82394757957	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	886	3780	25.0	-45	True	AATAAA	-15
PB.1569.1	chr10	-	4176	32	novel_in_catalog	RRP12	novel	1919	9	NA	NA	-28	0	no_combination_of_known_junctions	FALSE	canonical	1	929	junction_24	95624.14437900315	NA	0	NA	TRUE	NA	NA	NA	C	coding	827	2484	1300	3783	20.0	-16	True	AATAAA	-17
PB.11402.1	chr8	-	4537	26	full-splice_match	TONSL	ENST00000409379.7	4502	26	-35	0	-35	0	multi-exon	FALSE	canonical	1	86102	junction_24	58546.29715586119	NA	0	NA	TRUE	NA	NA	NA	A	coding	1378	4137	66	4202	95.0	-40	False	NA	NA
PB.5479.8	chr18	-	2751	15	novel_in_catalog	MBD1	novel	2532	15	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	35355	junction_1	160158.1632926193	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	178	1923	20.0	-9	True	TTTAAA	-29
PB.6069.4	chr19	+	2466	14	full-splice_match	CLPTM1	ENST00000337392.9	2604	14	137	1	2	-1	multi-exon	FALSE	canonical	1	523853	junction_1	314173.12178488343	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	14	2023	10.0	3	True	AATAAA	-27
PB.6069.5	chr19	+	2547	15	novel_not_in_catalog	CLPTM1	novel	1522	8	NA	NA	12	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	498754.8395060841	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	86	2110	25.0	13	True	AATAAA	-21
PB.6069.2	chr19	+	2252	13	novel_not_in_catalog	CLPTM1	novel	1522	8	NA	NA	-10	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	403998.7683897962	NA	3	NA	TRUE	NA	NA	NA	C	coding	567	1704	97	1800	0.0	-9	True	AATAAA	-36
PB.6069.3	chr19	+	3076	13	novel_in_catalog	CLPTM1	novel	1522	8	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	523853	junction_1	311972.9936982949	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	22	855	10.0	-5	True	AATAAA	-26
PB.6069.1	chr19	+	2945	12	novel_in_catalog	CLPTM1	novel	1522	8	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	10518	junction_10	396313.6797142235	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	26	859	10.0	-9	True	AATAAA	-27
PB.11625.56	chr9	-	2561	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	-156	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	176	1564	55.0	-13	True	AATATA	-33
PB.9689.11	chr6	+	5306	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	13	12	0	-12	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	4	NA	TRUE	NA	NA	NA	C	coding	451	1356	114	1469	20.0	0	True	AATAAA	-12
PB.6708.18	chr2	+	5055	13	novel_not_in_catalog	DDX18	novel	3796	14	NA	NA	70	-978	intron_retention	FALSE	non_canonical	0	0	junction_6	150227.08015839444	NA	3	NA	TRUE	NA	NA	NA	C	coding	319	960	59	1018	20.0	8	True	AATAAA	-15
PB.4354.5	chr16	+	1966	6	full-splice_match	TMEM219	ENST00000570255.5	926	6	-1041	1	27	0	multi-exon	FALSE	canonical	1	32410	junction_5	578414.5133761427	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	1014	1736	15.0	-10	True	AATAAA	-15
PB.4354.4	chr16	+	1873	5	full-splice_match	TMEM219	ENST00000566848.5	1292	5	-552	-29	21	0	multi-exon	FALSE	canonical	1	803163	junction_1	258305.66249152864	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	1020	1742	15.0	-16	True	AATAAA	-15
PB.4354.3	chr16	+	3249	4	incomplete-splice_match	TMEM219	ENST00000566848.5	1292	5	-557	-29	16	0	intron_retention	FALSE	canonical	1	803163	junction_1	249064.48575553013	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	1025	1747	15.0	-21	True	AATAAA	-15
PB.4354.2	chr16	+	935	6	full-splice_match	TMEM219	ENST00000279396.10	999	6	58	6	1	-1	multi-exon	FALSE	canonical	1	172749	junction_1	427757.03877757525	NA	1	1	TRUE	NA	NA	NA	C	coding	240	723	83	805	10.0	9	True	AATAAA	-14
PB.4354.1	chr16	+	2327	5	novel_in_catalog	TMEM219	novel	1024	6	NA	NA	-22	0	intron_retention	FALSE	canonical	1	241295	junction_1	450544.40449693747	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	103	825	15.0	-14	True	AATAAA	-15
PB.6366.1	chr2	+	1413	5	full-splice_match	CENPA	ENST00000335756.8	1452	5	31	8	1	-4	multi-exon	FALSE	canonical	1	125433	junction_1	78881.85408056469	NA	0	NA	TRUE	NA	NA	NA	A	coding	140	423	170	592	40.0	-39	True	AATAAA	-18
PB.10608.3	chr7	+	1952	11	novel_not_in_catalog	NCF1	novel	1396	11	NA	NA	24	0	intron_retention	FALSE	canonical	1	356	junction_7	228881.78185045658	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	47	883	25.0	NA	False	AATAAA	-16
PB.10608.2	chr7	+	1361	11	novel_not_in_catalog	NCF1	novel	1396	11	NA	NA	24	0	any annotated donor/acceptor	FALSE	canonical	1	4314	junction_8	333246.9321511602	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	47	1207	25.0	NA	False	AATAAA	-16
PB.10608.1	chr7	+	1894	10	novel_in_catalog	NCF1	novel	1396	11	NA	NA	-22	60	intron_retention	FALSE	canonical	1	5581	junction_9	221200.20097187976	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	44	880	25.0	NA	False	NA	NA
PB.10608.5	chr7	+	1349	11	full-splice_match	NCF1	ENST00000289473.8	1396	11	48	-1	-1	0	multi-exon	FALSE	canonical	1	5581	junction_10	317300.30133028555	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	23	1195	25.0	NA	False	AATAAA	-16
PB.10608.4	chr7	+	1893	7	novel_in_catalog	NCF1	novel	1396	11	NA	NA	24	337	intron_retention	FALSE	canonical	1	6513	junction_5	172746.07771114033	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	47	883	100.0	NA	False	NA	NA
PB.11668.2	chr9	-	1242	6	full-splice_match	PRXL2C	ENST00000375234.7	2863	6	-54	1675	-32	-1675	multi-exon	FALSE	canonical	1	88919	junction_1	49382.72832316984	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	55	735	25.0	1	True	NA	NA
PB.8727.3	chr4	-	7444	32	novel_in_catalog	ARAP2	novel	1969	13	NA	NA	-6	-7	intron_retention	FALSE	canonical	1	39833	junction_9	30031.847251478026	NA	1	NA	TRUE	NA	NA	NA	C	coding	1681	5046	497	5542	30.0	-33	True	ATTAAA	-17
PB.5479.7	chr18	-	2882	16	novel_in_catalog	MBD1	novel	2532	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	35355	junction_1	161101.45093386204	NA	2	NA	TRUE	NA	NA	NA	C	coding	622	1869	185	2053	20.0	-16	True	TTTAAA	-30
PB.8727.5	chr4	-	2813	14	novel_not_in_catalog	ARAP2	novel	7514	33	NA	NA	-4	-413	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	43053.71434374623	NA	1	1	TRUE	NA	NA	NA	C	coding	792	2376	438	2813	65.0	-31	True	NA	NA
PB.8727.4	chr4	-	3962	21	incomplete-splice_match	ARAP2	ENST00000303965.8	7514	33	168	62535	168	19908	3prime_fragment	FALSE	canonical	1	48516	junction_20	33005.25092508009	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3639	323	3961	40.0	3	True	NA	NA
PB.8727.7	chr4	-	3007	6	incomplete-splice_match	ARAP2	ENST00000303965.8	7514	33	-13	143375	-13	2	3prime_fragment	FALSE	canonical	1	48516	junction_5	45448.451360194886	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	504	2123	20.0	-40	True	AATAAA	-23
PB.8727.6	chr4	-	2883	13	incomplete-splice_match	ARAP2	ENST00000303965.8	7514	33	-18	94528	-18	-414	3prime_fragment	FALSE	canonical	1	48516	junction_12	33311.61013320531	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2373	509	2881	65.0	-45	True	NA	NA
PB.358.11	chr1	+	2533	6	novel_in_catalog	DPH2	novel	593	3	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	7344	junction_2	143785.27700901785	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	815	1705	5.0	-9	True	AATAAA	-13
PB.11844.1	chr9	-	4439	5	novel_in_catalog	ASB6	novel	4535	5	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	4849	junction_4	110694.8124450735	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	223	1251	35.0	-28	True	AATAAA	-19
PB.5181.1	chr17	-	1131	5	full-splice_match	ICAM2	ENST00000579788.5	1103	5	-28	0	2	0	multi-exon	TRUE	canonical	1	233720	junction_4	136244.02103280532	NA	0	NA	TRUE	NA	NA	NA	A	coding	275	828	153	980	15.0	-7	True	AATACA	-14
PB.5914.8	chr19	+	3854	18	full-splice_match	GPI	ENST00000644934.1	4194	18	69	271	0	-271	multi-exon	FALSE	canonical	1	3163243	junction_1	876700.4205803354	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	72	1748	85.0	0	True	TTTAAA	-26
PB.5914.9	chr19	+	3261	19	novel_not_in_catalog	GPI	novel	577	5	NA	NA	0	-271	any annotated donor/acceptor	TRUE	canonical	0	0	junction_18	1325448.6559815134	NA	4	1	TRUE	NA	NA	NA	C	coding	558	1677	72	1748	85.0	0	True	TTTAAA	-26
PB.8676.2	chr4	-	1416	10	full-splice_match	LYAR	ENST00000343470.8	1569	10	-21	174	-21	-171	multi-exon	FALSE	canonical	1	254799	junction_9	132337.30058536868	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	263	1402	40.0	-45	False	ATTAAA	-40
PB.358.12	chr1	+	2670	5	novel_in_catalog	DPH2	novel	593	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	262590	junction_2	57956.46432883911	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	752	1840	10.0	-7	True	AATAAA	-15
PB.8676.1	chr4	-	1554	10	full-splice_match	LYAR	ENST00000343470.8	1569	10	11	4	11	-1	multi-exon	FALSE	canonical	1	254799	junction_9	132337.30058536868	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	231	1370	40.0	-13	True	AATAAA	-22
PB.5914.2	chr19	+	1796	18	full-splice_match	GPI	ENST00000356487.10	2040	18	-32	276	-32	-193	multi-exon	FALSE	canonical	1	3163243	junction_1	876700.4205803354	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	104	1780	10.0	-1633	False	AATAAA	-16
PB.5914.3	chr19	+	3069	19	novel_not_in_catalog	GPI	novel	577	5	NA	NA	-27	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_18	1325448.6559815134	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	99	1775	0.0	-1628	False	NA	NA
PB.5914.1	chr19	+	2418	20	novel_in_catalog	GPI	novel	577	5	NA	NA	-70	0	combination_of_known_junctions	TRUE	canonical	1	3359	junction_1	1585508.7840743067	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	334	2127	15.0	-7133	False	AATAAA	-14
PB.5914.6	chr19	+	2019	18	novel_not_in_catalog	GPI	novel	577	5	NA	NA	-5	1	any annotated donor/acceptor	FALSE	canonical	1	19317	junction_14	1359174.6082339063	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	77	1726	15.0	-5	True	AATAAA	-16
PB.5914.7	chr19	+	4125	18	full-splice_match	GPI	ENST00000644934.1	4194	18	69	0	0	0	multi-exon	FALSE	canonical	1	3163243	junction_1	876700.4205803354	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	72	1748	0.0	0	True	NA	NA
PB.5914.4	chr19	+	2373	20	novel_in_catalog	GPI	novel	577	5	NA	NA	-19	23752	no_combination_of_known_junctions	FALSE	canonical	1	3277	junction_14	1952014.0608855903	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	91	2328	30.0	-19	True	ATTAAA	-17
PB.5914.5	chr19	+	2610	19	novel_in_catalog	GPI	novel	577	5	NA	NA	-15	13	combination_of_known_junctions	FALSE	canonical	1	1012	junction_9	1636371.5779866274	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	87	866	10.0	-15	True	AATAAA	-35
PB.8522.1	chr3	-	1920	5	full-splice_match	TNFSF10	ENST00000241261.6	1953	5	31	2	-1	-2	multi-exon	FALSE	canonical	1	474886	junction_2	10654.084249127187	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	93	938	30.0	-10	True	AATAAA	-23
PB.3542.28	chr14	-	2598	10	novel_in_catalog	NUMB	novel	3607	11	NA	NA	-7	-328	combination_of_known_junctions	FALSE	canonical	1	95239	junction_8	129497.63823824722	NA	1	1	TRUE	NA	NA	NA	C	coding	592	1779	243	2021	45.0	8882	False	AATAAA	-13
PB.3542.29	chr14	-	1827	8	incomplete-splice_match	NUMB	ENST00000557597.5	3547	12	-58	11009	0	0	3prime_fragment	FALSE	canonical	1	276892	junction_6	91675.2806450405	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	321	1058	95.0	-35	True	NA	NA
PB.2839.1	chr12	-	1609	10	full-splice_match	NUP37	ENST00000552283.5	2372	10	16	747	12	339	multi-exon	FALSE	canonical	1	293037	junction_9	108324.57571678839	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	125	1105	85.0	5	True	NA	NA
PB.3542.25	chr14	-	3036	12	full-splice_match	NUMB	ENST00000555394.5	3037	12	0	1	0	-1	multi-exon	FALSE	canonical	1	96919	junction_7	145315.85678357267	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	321	2132	35.0	-35	True	AATAAA	-32
PB.2839.3	chr12	-	2968	7	full-splice_match	NUP37	ENST00000551200.5	1158	7	-9	-1801	-9	-756	multi-exon	FALSE	canonical	1	293037	junction_6	104262.64223531308	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	117	896	90.0	13	True	NA	NA
PB.2839.2	chr12	-	1268	10	full-splice_match	NUP37	ENST00000552283.5	2372	10	10	1094	6	0	multi-exon	FALSE	canonical	1	293037	junction_9	108324.57571678839	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	131	1111	35.0	-1	True	AATAAA	-15
PB.3542.23	chr14	-	3007	11	full-splice_match	NUMB	ENST00000554546.5	3607	11	33	567	-4	-1	multi-exon	FALSE	canonical	1	276892	junction_9	85105.05034602823	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	325	2103	35.0	-39	True	AATAAA	-32
PB.8703.1	chr4	+	5660	10	full-splice_match	CPEB2	ENST00000345451.7	2013	10	-123	-3524	-123	1	multi-exon	TRUE	canonical	1	55235	junction_1	35268.90663648837	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	211	1890	25.0	-53	True	AATAAA	-17
PB.8439.10	chr3	+	1579	8	full-splice_match	ATP1B3	ENST00000466678.5	1708	8	-161	290	29	9	multi-exon	FALSE	canonical	1	30110	junction_1	421007.56610022177	NA	9	3	TRUE	NA	NA	NA	C	coding	265	798	292	1089	35.0	2	True	AATAAA	-9
PB.11905.1	chr9	+	2182	1	full-splice_match	C9orf163	ENST00000354376.3	2572	1	389	1	389	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	203	612	566	1177	10.0	874	False	NA	NA
PB.3694.2	chr14	+	6473	1	novel_in_catalog	SIVA1	novel	802	4	NA	NA	2	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	148	447	2384	2830	25.0	0	True	AATAAA	-18
PB.12020.5	chrX	+	4513	4	full-splice_match	PRRG1	ENST00000543642.5	4509	4	-7	3	-7	0	multi-exon	FALSE	canonical	1	4105	junction_1	30791.663853856433	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	189	845	25.0	-41	True	AATAAA	-16
PB.12020.4	chrX	+	3154	4	full-splice_match	PRRG1	ENST00000378628.8	4493	4	44	1295	10	-1289	multi-exon	FALSE	canonical	1	40999	junction_1	13494.463317309888	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	119	775	50.0	-45	True	NA	NA
PB.12020.7	chrX	+	1696	4	full-splice_match	PRRG1	ENST00000378628.8	4493	4	90	2707	1	941	multi-exon	FALSE	canonical	1	40999	junction_1	13494.463317309888	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	73	729	25.0	1	True	AATAAA	-10
PB.12020.6	chrX	+	4522	4	novel_not_in_catalog	PRRG1	novel	4493	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	783	junction_1	32354.12222061768	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	198	854	25.0	0	True	AATAAA	-16
PB.12020.1	chrX	+	4321	3	full-splice_match	PRRG1	ENST00000491253.1	650	3	-24	-3647	10	-1	multi-exon	FALSE	canonical	1	6321	junction_2	17339.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	9	30	619	648	10.0	11	True	AATAAA	-21
PB.12020.3	chrX	+	4416	4	full-splice_match	PRRG1	ENST00000378628.8	4493	4	71	6	16	0	multi-exon	FALSE	canonical	1	40999	junction_1	13494.463317309888	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	92	748	25.0	-18	True	AATAAA	-16
PB.12020.2	chrX	+	4559	5	full-splice_match	PRRG1	ENST00000449135.6	4481	5	-77	-1	-14	1	multi-exon	FALSE	canonical	1	2055	junction_1	32539.03461229297	NA	6	NA	TRUE	NA	NA	NA	C	coding	218	657	234	890	20.0	-69	True	AATAAA	-17
PB.8737.2	chr4	-	4789	2	full-splice_match	TLR6	ENST00000436693.6	5880	2	-9	1100	-9	-1100	multi-exon	FALSE	canonical	1	17452	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	796	2391	131	2521	80.0	-10	True	NA	NA
PB.8737.3	chr4	-	3648	2	full-splice_match	TLR6	ENST00000436693.6	5880	2	-6	2238	-6	649	multi-exon	FALSE	canonical	1	17452	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	128	2518	40.0	-7	True	NA	NA
PB.8737.1	chr4	-	6708	2	full-splice_match	TLR6	ENST00000436693.6	5880	2	-12	-816	-12	816	multi-exon	FALSE	canonical	1	17452	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	134	2524	35.0	-13	True	NA	NA
PB.8737.4	chr4	-	3250	3	novel_not_in_catalog	TLR1	novel	555	6	NA	NA	0	-25731	intron_retention	FALSE	canonical	1	1733	junction_2	2256.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	378	2768	30.0	-1	True	NA	NA
PB.8737.5	chr4	-	2994	2	full-splice_match	TLR6	ENST00000508254.5	572	2	0	-2422	0	1	multi-exon	FALSE	canonical	1	17452	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	122	2512	30.0	-1	True	NA	NA
PB.3835.14	chr15	+	2826	1	full-splice_match	B2M	ENST00000623550.1	2329	1	-498	1	-181	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2740	False	AATAAA	-13
PB.10720.1	chr7	+	613	4	full-splice_match	LAMTOR4	ENST00000468582.5	621	4	1	7	1	2	multi-exon	FALSE	canonical	1	241982	junction_1	1100714.5723314872	NA	0	NA	TRUE	NA	NA	NA	A	coding	41	126	247	372	20.0	1	True	AATAAA	-23
PB.5605.4	chr19	+	1557	6	novel_not_in_catalog	GNA15	novel	2133	7	NA	NA	-66	-22	any annotated donor/acceptor	FALSE	canonical	1	440	junction_1	159821.6125902877	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	53	829	5.0	1	True	ATTAAA	-15
PB.3835.10	chr15	+	2171	3	full-splice_match	B2M	ENST00000559916.1	1081	3	2	-1092	2	-23	multi-exon	FALSE	canonical	1	47900283	junction_1	1878111.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	119	360	33	392	60.0	-2	True	GATAAA	-44
PB.3835.11	chr15	+	3885	2	incomplete-splice_match	B2M	ENST00000558401.6	1705	4	30	-333	0	333	intron_retention	FALSE	canonical	1	47900283	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	31	399	80.0	0	True	NA	NA
PB.3835.12	chr15	+	1794	3	full-splice_match	B2M	ENST00000559916.1	1081	3	4	-717	0	-19	multi-exon	FALSE	canonical	1	47900283	junction_1	1878111.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	31	390	20.0	0	True	NA	NA
PB.3835.13	chr15	+	2868	1	full-splice_match	B2M	ENST00000632133.1	2403	1	-719	254	99	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-6001	False	AAAAAG	-9
PB.8890.11	chr4	+	4663	12	novel_not_in_catalog	METAP1	novel	2791	11	NA	NA	4	-5	any annotated donor/acceptor	FALSE	canonical	1	4089	junction_3	245025.87915501077	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	2354	3172	30.0	23	True	ATTAAA	-20
PB.2457.1	chr12	-	1895	8	novel_not_in_catalog	AC141557.1	novel	400	4	NA	NA	7336	1291	any annotated donor/acceptor	FALSE	canonical	1	347	junction_5	72641.87624397443	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-44	False	ATTAAA	-14
PB.2726.2	chr12	+	3812	24	novel_in_catalog	XPOT	novel	6414	25	NA	NA	84	-2446	no_combination_of_known_junctions	FALSE	canonical	1	6575	junction_22	206731.68385200982	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	446	3262	25.0	-27	True	AATAAA	-13
PB.2726.3	chr12	+	3768	25	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	1	-2447	any annotated donor/acceptor	FALSE	canonical	1	2437	junction_9	210275.16092808807	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	529	3219	25.0	1	True	AATAAA	-12
PB.2726.1	chr12	+	3916	25	novel_in_catalog	XPOT	novel	6414	25	NA	NA	16	-2438	combination_of_known_junctions	FALSE	canonical	1	28766	junction_13	208232.76435738124	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	2042	3358	25.0	16	True	AATAAA	-21
PB.2726.6	chr12	+	3387	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	203	2824	203	-2824	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	327	3215	50.0	-11	True	AATACA	-8
PB.2726.7	chr12	+	4295	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	186	1933	186	-1933	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	344	3232	85.0	-28	True	NA	NA
PB.2726.4	chr12	+	4930	25	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	2	-2438	any annotated donor/acceptor	FALSE	canonical	1	1688	junction_1	210204.51286134662	NA	7	NA	TRUE	NA	NA	NA	C	coding	962	2889	1484	4372	25.0	2	True	AATAAA	-21
PB.2726.5	chr12	+	3719	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	258	2437	258	-2437	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	272	3160	25.0	44	True	AATAAA	-22
PB.2726.8	chr12	+	3774	24	novel_in_catalog	XPOT	novel	6414	25	NA	NA	126	-2444	no_combination_of_known_junctions	FALSE	canonical	1	14127	junction_4	214096.454477441	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	604	3222	15.0	15	True	AATAAA	-15
PB.2726.9	chr12	+	6394	25	full-splice_match	XPOT	ENST00000332707.9	6414	25	19	1	19	-1	multi-exon	FALSE	canonical	1	29892	junction_11	204416.04938447615	NA	3	NA	TRUE	NA	NA	NA	C	coding	962	2889	511	3399	20.0	19	True	AATAAA	-21
PB.3022.2	chr12	+	2012	6	full-splice_match	PUS1	ENST00000376649.7	4094	6	43	2039	-10	0	multi-exon	FALSE	canonical	1	149475	junction_1	84674.70932126073	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	542	1741	10.0	-10	True	ATTAAA	-23
PB.3022.3	chr12	+	1923	6	novel_not_in_catalog	PUS1	novel	1664	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	128937.40148862937	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	636	1652	10.0	0	True	ATTAAA	-23
PB.3022.1	chr12	+	2124	7	novel_in_catalog	PUS1	novel	1664	6	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	5894	junction_4	131108.78796813058	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1365	1853	10.0	-10	True	ATTAAA	-23
PB.10528.2	chr7	-	3798	5	full-splice_match	H2AFV	ENST00000222690.10	3804	5	1	5	0	-5	multi-exon	FALSE	canonical	1	79965	junction_1	457696.38983610086	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	106	450	55.0	3	True	NA	NA
PB.10528.3	chr7	-	3767	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	-31	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	521595.44823650445	NA	3	NA	TRUE	NA	NA	NA	C	coding	128	387	144	530	55.0	-35	False	NA	NA
PB.10528.1	chr7	-	5139	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	0	11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	521595.44823650445	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	106	492	30.0	3	True	AAAAAG	-11
PB.10528.6	chr7	-	3583	4	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	-5	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	549819.0000878067	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	34	True	NA	NA
PB.6077.1	chr19	+	2351	9	incomplete-splice_match	MARK4	ENST00000262891.8	3573	17	26758	12	-2129	0	5prime_fragment	FALSE	canonical	1	183934	junction_7	63470.25522131903	NA	1	NA	TRUE	NA	NA	NA	B	coding	448	1347	34	1380	20.0	NA	False	NA	NA
PB.10528.5	chr7	-	3729	4	novel_in_catalog	H2AFV	novel	3804	5	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	60905	junction_3	534550.1674666903	NA	3	NA	TRUE	NA	NA	NA	C	coding	88	267	115	381	55.0	-6	True	NA	NA
PB.10528.8	chr7	-	5349	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	6	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	521595.44823650445	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	87	473	55.0	22	True	NA	NA
PB.10528.9	chr7	-	5068	6	novel_not_in_catalog	H2AFV	novel	3804	5	NA	NA	-3	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	521595.44823650445	NA	3	NA	TRUE	NA	NA	NA	C	coding	128	387	96	482	55.0	13	True	NA	NA
PB.6356.4	chr2	+	1915	3	novel_not_in_catalog	AC104699.1	novel	414	3	NA	NA	-20	1628	any annotated donor/acceptor	FALSE	canonical	1	29988	junction_1	20346.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	4	True	NA	NA
PB.6356.3	chr2	+	2004	3	novel_not_in_catalog	AC104699.1	novel	414	3	NA	NA	-20	1627	any annotated donor/acceptor	FALSE	canonical	1	29297	junction_1	20691.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	4	True	NA	NA
PB.6338.2	chr2	-	6436	22	novel_in_catalog	PUM2	novel	6112	20	NA	NA	1	-20	no_combination_of_known_junctions	TRUE	canonical	1	9187	junction_21	239634.26451784142	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	369	3563	30.0	-16	True	AATAAA	-26
PB.6356.1	chr2	+	3629	3	novel_not_in_catalog	AC104699.1	novel	414	3	NA	NA	-23	3249	any annotated donor/acceptor	FALSE	canonical	1	29297	junction_1	20691.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.1174.6	chr1	-	1773	5	novel_in_catalog	JMJD4	novel	3749	2	NA	NA	-20	859	intron_retention	FALSE	canonical	1	228562	junction_4	46595.767760468334	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	31	966	5.0	-21	True	AATAAA	-32
PB.3379.8	chr14	-	1892	14	full-splice_match	SNX6	ENST00000362031.8	2001	14	41	68	-9	-68	multi-exon	FALSE	canonical	1	281529	junction_5	182746.41307920002	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	27	1247	25.0	-3	True	AATAAA	-23
PB.1865.9	chr11	-	4373	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	5	310	1	12	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	17	610	5.0	-2	True	AATAAA	-27
PB.1865.8	chr11	-	5235	4	novel_in_catalog	LIN7C	novel	4688	5	NA	NA	1	-2	intron_retention	FALSE	canonical	1	211872	junction_3	80828.93825989688	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	17	496	10.0	-2	True	AATAAA	-12
PB.1865.3	chr11	-	4966	6	novel_not_in_catalog	LIN7C	novel	4688	5	NA	NA	-1	148	any annotated donor/acceptor	FALSE	canonical	1	287	junction_4	197990.72581775137	NA	2	1	TRUE	NA	NA	NA	C	coding	240	723	23	745	40.0	-8	True	CATAAA	-5
PB.1865.1	chr11	-	4831	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	5	-148	1	148	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	47	NA	TRUE	NA	NA	NA	C	coding	197	594	17	610	40.0	-2	True	CATAAA	-5
PB.1865.7	chr11	-	5373	5	novel_not_in_catalog	LIN7C	novel	4688	5	NA	NA	2	-2	intron_retention	FALSE	canonical	1	8522	junction_3	185224.57958988595	NA	3	NA	TRUE	NA	NA	NA	C	coding	2	9	297	305	10.0	-1	True	AATAAA	-12
PB.1865.6	chr11	-	4654	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	-9	43	-9	-43	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	31	624	25.0	-16	True	AATAGA	-21
PB.1865.4	chr11	-	4829	6	novel_not_in_catalog	LIN7C	novel	4688	5	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	8522	junction_4	195975.90128237705	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-7	True	AATAAA	-16
PB.5619.1	chr19	-	1513	11	full-splice_match	MAP2K2	ENST00000262948.9	1734	11	211	10	154	2	multi-exon	FALSE	canonical	1	193723	junction_6	480528.1559679932	NA	0	NA	TRUE	NA	NA	NA	A	coding	400	1203	44	1246	45.0	228	False	AAAACA	-13
PB.9931.1	chr6	-	3256	5	novel_in_catalog	BAK1	novel	2212	7	NA	NA	17	-2	intron_retention	TRUE	canonical	1	19231	junction_4	13832.774387302064	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	284	709	15.0	-18	True	AATAAA	-20
PB.9102.4	chr4	+	2913	4	incomplete-splice_match	TLR3	ENST00000513189.1	1156	5	17	-1582	17	-374	intron_retention	FALSE	canonical	1	22180	junction_2	6202.542113252168	NA	2	NA	TRUE	NA	NA	NA	C	coding	829	2490	85	2574	80.0	16	True	ATTAAA	-44
PB.11050.4	chr8	+	3075	2	incomplete-splice_match	PTK2B	ENST00000522338.5	539	4	13878	-2658	28	2658	5prime_fragment	FALSE	canonical	1	256180	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1304	False	AAAAAG	-10
PB.877.2	chr1	+	2846	6	full-splice_match	SDHC	ENST00000367975.6	13566	6	124	10596	0	1555	multi-exon	FALSE	canonical	1	93650	junction_4	260619.41929595344	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	26	535	50.0	0	True	AGTAAA	-11
PB.11847.1	chr9	-	4207	5	full-splice_match	TOR1A	ENST00000351698.4	2076	5	-1	-2130	-1	2130	multi-exon	FALSE	canonical	1	426167	junction_3	144659.4116796415	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	51	1049	45.0	0	True	AATAAA	-22
PB.7927.1	chr3	+	2848	9	incomplete-splice_match	CRELD1	ENST00000397170.7	1728	11	-29	-34	-29	-4	intron_retention	FALSE	canonical	1	34020	junction_1	108400.34541623645	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	80	1171	40.0	-258	False	AATAAA	-19
PB.11847.2	chr9	-	2243	5	novel_in_catalog	TOR1A	novel	2076	5	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	12830	junction_1	284167.3619536338	NA	2	NA	TRUE	NA	NA	NA	C	coding	251	756	48	803	20.0	3	True	AATAAA	-16
PB.11847.5	chr9	-	1944	5	full-splice_match	TOR1A	ENST00000351698.4	2076	5	-2	134	-2	-134	multi-exon	FALSE	canonical	1	426167	junction_3	144659.4116796415	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	52	1050	25.0	-1	True	ATTAAA	-18
PB.10464.1	chr7	-	2341	2	full-splice_match	ZNRF2P2	ENST00000426767.1	663	2	20	-1698	20	1698	multi-exon	FALSE	canonical	1	25802	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	19	60	245	304	15.0	-170	False	NA	NA
PB.11847.6	chr9	-	1441	5	full-splice_match	TOR1A	ENST00000351698.4	2076	5	-2	637	-2	27	multi-exon	FALSE	canonical	1	426167	junction_3	144659.4116796415	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	52	1050	10.0	-1	True	TTTAAA	-37
PB.11322.1	chr8	-	4329	7	novel_in_catalog	DERL1	novel	3340	8	NA	NA	-48	-184	intron_retention	FALSE	canonical	1	694348	junction_5	105833.5849016695	NA	3	NA	TRUE	NA	NA	NA	C	coding	136	411	1820	2230	20.0	2	True	ATTAAA	-13
PB.6067.1	chr19	+	1747	9	full-splice_match	TOMM40	ENST00000426677.6	1725	9	-7	-15	-2	15	multi-exon	FALSE	canonical	1	1809	junction_7	164442.11940789188	NA	2	1	TRUE	NA	NA	NA	C	coding	361	1086	188	1273	85.0	1	True	TATAAA	-41
PB.6067.2	chr19	+	1634	10	full-splice_match	TOMM40	ENST00000405636.6	1709	10	30	45	13	15	multi-exon	FALSE	canonical	1	1809	junction_8	163429.65771718288	NA	1	1	TRUE	NA	NA	NA	C	coding	361	1086	75	1160	85.0	-5	True	TATAAA	-41
PB.11322.2	chr8	-	3025	8	full-splice_match	DERL1	ENST00000259512.8	3340	8	131	184	10	-184	multi-exon	FALSE	canonical	1	694348	junction_6	99855.87101335972	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	171	926	20.0	9	True	ATTAAA	-13
PB.11322.5	chr8	-	2632	8	full-splice_match	DERL1	ENST00000259512.8	3340	8	83	625	-38	360	multi-exon	FALSE	canonical	1	694348	junction_6	99855.87101335972	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	219	974	35.0	-2	True	AATAAA	-19
PB.11322.4	chr8	-	2750	4	full-splice_match	DERL1	ENST00000419562.6	918	4	-15	-1817	-15	-184	multi-exon	FALSE	canonical	1	3499	junction_3	370996.346516003	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	196	651	20.0	-16	True	ATTAAA	-13
PB.11322.7	chr8	-	1125	8	full-splice_match	DERL1	ENST00000259512.8	3340	8	108	2107	-13	-106	multi-exon	FALSE	canonical	1	694348	junction_6	99855.87101335972	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	194	949	25.0	-14	True	AATATA	-18
PB.11647.17	chr9	-	3239	12	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1166	intron_retention	FALSE	non_canonical	0	0	junction_6	78502.40843881297	NA	0	NA	TRUE	NA	NA	NA	B	coding	957	2871	368	3238	65.0	-46	False	NA	NA
PB.10512.1	chr7	+	3940	7	full-splice_match	UBE2D4	ENST00000222402.7	3974	7	-13	47	-7	-47	multi-exon	FALSE	canonical	1	76388	junction_1	59882.17790424423	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	103	546	90.0	-5	True	NA	NA
PB.10512.2	chr7	+	1300	5	full-splice_match	UBE2D4	ENST00000454350.5	789	5	-6	-505	-2	-3	multi-exon	FALSE	canonical	1	17933	junction_2	98067.54982791198	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	AATAAA	-23
PB.11974.2	chrX	+	3373	23	full-splice_match	OFD1	ENST00000340096.10	3611	23	106	132	-47	48	multi-exon	FALSE	canonical	1	29989	junction_3	69428.73167298254	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	225	3260	10.0	40	True	AATAAA	-14
PB.11974.3	chrX	+	3009	21	incomplete-splice_match	OFD1	ENST00000340096.10	3611	23	102	1273	-51	-1091	3prime_fragment	FALSE	canonical	1	29989	junction_3	70622.23264757	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2781	229	3009	70.0	36	True	NA	NA
PB.6368.2	chr2	+	3051	18	novel_in_catalog	TMEM214	novel	804	3	NA	NA	-6	0	intron_retention	FALSE	canonical	1	20156	junction_9	227623.00864861868	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	46	2193	15.0	-33	True	AATAAA	-22
PB.11974.1	chrX	+	3283	22	full-splice_match	OFD1	ENST00000380550.6	3296	22	-76	89	61	49	multi-exon	FALSE	canonical	1	29989	junction_3	69997.9586980627	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	254	3169	15.0	11	True	AATAAA	-15
PB.6368.4	chr2	+	2970	17	full-splice_match	TMEM214	ENST00000238788.13	2990	17	18	2	-5	0	multi-exon	FALSE	canonical	1	534077	junction_3	103850.32771313243	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	45	2114	15.0	-32	True	AATAAA	-20
PB.11974.7	chrX	+	2841	20	incomplete-splice_match	OFD1	ENST00000340096.10	3611	23	106	2206	-47	-2024	3prime_fragment	FALSE	canonical	1	29989	junction_3	66396.3916358441	NA	6	1	TRUE	NA	NA	NA	C	coding	872	2616	225	2840	70.0	40	True	NA	NA
PB.11974.4	chrX	+	3608	20	incomplete-splice_match	OFD1	ENST00000490265.5	4259	23	-13	2206	3	-2024	3prime_fragment	FALSE	canonical	1	29989	junction_3	68367.77908235531	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1344	2264	3607	70.0	0	True	NA	NA
PB.11974.5	chrX	+	3605	23	full-splice_match	OFD1	ENST00000340096.10	3611	23	3	3	3	-3	multi-exon	FALSE	canonical	1	29989	junction_3	69428.73167298254	NA	1	NA	TRUE	NA	NA	NA	C	coding	1011	3036	328	3363	15.0	0	True	AATAAA	-14
PB.5128.1	chr17	-	5750	9	full-splice_match	TRIM25	ENST00000316881.8	5734	9	-15	-1	-15	1	multi-exon	TRUE	canonical	1	275703	junction_4	82573.87628965956	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	66	1958	10.0	-6	True	NA	NA
PB.11974.9	chrX	+	2728	19	novel_in_catalog	OFD1	novel	3611	23	NA	NA	-45	-2024	intron_retention	FALSE	canonical	1	29989	junction_3	63126.332514697635	NA	1	1	TRUE	NA	NA	NA	C	coding	835	2505	223	2727	70.0	-276	False	NA	NA
PB.9931.3	chr6	-	2110	6	full-splice_match	BAK1	ENST00000374467.3	2136	6	25	1	25	-1	multi-exon	FALSE	canonical	1	19231	junction_5	12707.0502792741	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	225	860	20.0	-4	True	AATAAA	-16
PB.5128.4	chr17	-	5679	10	full-splice_match	TRIM25	ENST00000537230.2	2906	10	-15	-2758	-9	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	143232.1517566482	NA	1	NA	TRUE	NA	NA	NA	C	coding	630	1893	60	1952	15.0	0	True	NA	NA
PB.3466.2	chr14	-	2347	4	full-splice_match	PSMA3-AS1	ENST00000555275.5	903	4	-17	-1427	-5	-97	multi-exon	FALSE	canonical	1	76421	junction_1	65091.60138519323	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-25	True	NA	NA
PB.3466.3	chr14	-	2261	5	novel_not_in_catalog	ARMH4	novel	572	3	NA	NA	0	-126361	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	78243.72713834637	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-25	True	NA	NA
PB.3466.1	chr14	-	2201	4	full-splice_match	PSMA3-AS1	ENST00000556002.5	1039	4	-13	-1149	0	-94	multi-exon	FALSE	canonical	1	54456	junction_2	72150.43462562555	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.10754.3	chr7	-	2425	3	full-splice_match	POLR2J3	ENST00000443430.2	932	3	0	-1493	0	-15	multi-exon	FALSE	canonical	1	409	junction_1	35623.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	15	48	521	568	75.0	NA	False	NA	NA
PB.3466.4	chr14	-	1795	2	incomplete-splice_match	PSMA3-AS1	ENST00000557660.5	2360	4	-19	20266	-5	-700	3prime_fragment	FALSE	canonical	1	28511	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	568	897	50.0	-25	True	NA	NA
PB.6116.4	chr19	-	2681	8	novel_not_in_catalog	TMEM143	novel	2560	8	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	6617	junction_3	21103.50778173803	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	20	718	25.0	-2	True	AATAAA	-17
PB.17.1	chr1	-	2376	11	incomplete-splice_match	DVL1	ENST00000378891.9	2926	15	7341	3	-1406	0	5prime_fragment	TRUE	canonical	1	346158	junction_4	138767.6000153134	NA	0	NA	TRUE	NA	NA	NA	A	coding	426	1281	233	1513	15.0	7671	False	AAAAAG	-17
PB.11286.6	chr8	+	2600	6	novel_not_in_catalog	FZD6	novel	3719	7	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	639	junction_2	118426.5367214629	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	620	1297	30.0	-34	True	TTTAAA	-18
PB.11286.7	chr8	+	2840	7	novel_not_in_catalog	FZD6	novel	3719	7	NA	NA	5	2	intron_retention	FALSE	canonical	1	1839	junction_3	107781.07029903514	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	811	1488	35.0	-28	True	AATAAA	-14
PB.7961.1	chr3	+	3548	6	full-splice_match	EAF1	ENST00000396842.6	4690	6	202	940	-41	-940	multi-exon	FALSE	canonical	1	203078	junction_2	12438.36485395086	NA	2	NA	TRUE	NA	NA	NA	C	coding	268	807	224	1030	80.0	-41	True	NA	NA
PB.7961.2	chr3	+	4236	6	full-splice_match	EAF1	ENST00000396842.6	4690	6	453	1	210	-1	multi-exon	FALSE	canonical	1	203078	junction_2	12438.36485395086	NA	3	NA	TRUE	NA	NA	NA	C	coding	197	594	186	779	5.0	-1097	False	AATAAA	-19
PB.7961.3	chr3	+	4332	5	full-splice_match	EAF1	ENST00000449565.1	1037	5	-22	-3273	-22	0	multi-exon	FALSE	canonical	1	27647	junction_2	85780.83713306836	NA	4	NA	TRUE	NA	NA	NA	C	coding	167	504	371	874	0.0	-22	True	AATAAA	-20
PB.10066.1	chr6	-	4052	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	533	9	-124	-9	multi-exon	TRUE	canonical	1	945065	junction_3	75509.6291585826	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	155	883	50.0	394	False	AATAAA	-11
PB.10066.3	chr6	-	4303	6	full-splice_match	TMEM30A	ENST00000475111.6	2791	6	154	-1666	154	-9	multi-exon	FALSE	canonical	1	16101	junction_5	426601.45398298866	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	157	1134	50.0	-15	True	AATAAA	-11
PB.10066.2	chr6	-	4338	8	novel_not_in_catalog	TMEM30A	novel	4594	7	NA	NA	179	-9	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_7	370492.69185119274	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	132	1169	50.0	10	True	AATAAA	-11
PB.6116.1	chr19	-	2158	7	full-splice_match	TMEM143	ENST00000435956.7	2272	7	120	-6	-1	1	multi-exon	FALSE	canonical	1	22712	junction_5	15977.69595144014	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	20	1294	30.0	-2	True	AATAAA	-20
PB.11286.5	chr8	+	3742	7	full-splice_match	FZD6	ENST00000358755.4	3788	7	48	-2	3	2	multi-exon	FALSE	canonical	1	191219	junction_1	51534.50422262954	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	372	2390	35.0	-19	True	AATAAA	-14
PB.6116.3	chr19	-	2284	8	full-splice_match	TMEM143	ENST00000293261.7	2560	8	276	0	-21	0	multi-exon	FALSE	canonical	1	54883	junction_3	5589.248677193581	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	42	1421	25.0	84	False	AATAAA	-19
PB.6116.2	chr19	-	3353	6	novel_in_catalog	TMEM143	novel	2560	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	5402	junction_4	24980.64078441544	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1386	1874	25.0	-1	True	AATAAA	-19
PB.7336.20	chr20	+	7871	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	11	-9	any annotated donor/acceptor	FALSE	canonical	1	35752	junction_14	129501.02652054939	NA	4	NA	TRUE	NA	NA	NA	C	coding	1404	4215	206	4420	45.0	-806	False	AATAAA	-12
PB.35.4	chr1	+	1400	7	full-splice_match	RER1	ENST00000605895.5	3044	7	-28	1672	-23	21	multi-exon	FALSE	canonical	1	563752	junction_1	466547.83435272984	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	162	752	25.0	-37	False	TATAAA	-39
PB.8236.1	chr3	-	3938	7	novel_not_in_catalog	ZNF717	novel	1577	7	NA	NA	6	-6	intron_retention	TRUE	canonical	1	1993	junction_2	33649.44154068534	NA	3	NA	TRUE	NA	NA	NA	A	coding	831	2496	797	3292	30.0	-1	True	NA	NA
PB.11946.1	chrY	+	2702	9	full-splice_match	CD99	ENST00000482405.7_PAR_Y	842	9	36	-1896	-15	1896	multi-exon	FALSE	canonical	1	20	junction_8	20220.827740228637	NA	2	NA	TRUE	NA	NA	NA	C	coding	160	483	16	498	55.0	NA	False	TATAAA	-9
PB.11946.3	chrX	+	3355	9	full-splice_match	CD99	ENST00000482405.7	842	9	16	-2529	0	2529	multi-exon	FALSE	canonical	1	201	junction_8	81520.47093943643	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	36	518	95.0	0	True	NA	NA
PB.11946.2	chrY	+	1233	10	full-splice_match	CD99	ENST00000381192.9_PAR_Y	1291	10	56	2	2	-2	multi-exon	FALSE	canonical	1	1258	junction_8	19175.166145078325	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	173	730	20.0	NA	False	AATAAA	-16
PB.8527.11	chr3	-	4044	17	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	1	17136	junction_16	191748.06425048623	NA	8	1	TRUE	NA	NA	NA	C	coding	514	1545	349	1893	80.0	-5	True	NA	NA
PB.5466.2	chr18	-	5613	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-158	5620	0	3436	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	4	NA	TRUE	NA	NA	NA	C	coding	621	1866	159	2024	100.0	1	True	NA	NA
PB.10307.1	chr6	-	1313	4	novel_in_catalog	DYNLT1	novel	2891	2	NA	NA	-25	-3	intron_retention	FALSE	canonical	1	683185	junction_3	246120.2881050014	NA	0	NA	TRUE	NA	NA	NA	A	coding	92	279	57	335	20.0	8952	False	AATAAA	-13
PB.2944.1	chr12	+	2099	1	full-splice_match	AC004812.2	ENST00000611079.1	2094	1	-7	2	-7	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	121	366	236	601	15.0	-26	True	NA	NA
PB.11516.9	chr9	-	3306	17	novel_in_catalog	VCP	novel	4370	17	NA	NA	2	306	combination_of_known_junctions	FALSE	canonical	1	21742	junction_16	856016.8175219288	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	468	2753	10.0	-1	True	AATAAA	-17
PB.6990.70	chr2	-	7775	44	novel_in_catalog	FN1	novel	8103	45	NA	NA	-2	1	intron_retention	FALSE	canonical	1	1096730	junction_7	2637882.100583338	NA	0	NA	TRUE	NA	NA	NA	C	coding	2271	6816	269	7084	30.0	-3	True	AATAAA	-16
PB.11516.6	chr9	-	2903	16	novel_not_in_catalog	VCP	novel	4370	17	NA	NA	-7	312	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	918883.9547535816	NA	2	1	TRUE	NA	NA	NA	C	coding	751	2256	282	2537	5.0	-10	True	AATAAA	-23
PB.3624.1	chr14	+	5157	17	novel_not_in_catalog	CPSF2	novel	13035	16	NA	NA	8	2953	any annotated donor/acceptor	FALSE	canonical	1	728	junction_1	188285.85794626878	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	354	2702	25.0	-39	False	NA	NA
PB.6030.1	chr19	-	2642	4	full-splice_match	ERF	ENST00000222329.8	2698	4	64	-8	14	8	multi-exon	FALSE	canonical	1	198060	junction_3	178334.93742020006	NA	0	NA	TRUE	NA	NA	NA	A	coding	548	1647	95	1741	20.0	63	False	AATAAA	-22
PB.12340.4	chrX	-	3262	8	novel_not_in_catalog	HCFC1	novel	8869	26	NA	NA	1305	-4	any annotated donor/acceptor	FALSE	canonical	1	25831	junction_5	173011.64991657974	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	135	1478	35.0	4221	False	ATTAAA	-13
PB.3198.5	chr13	+	4653	26	incomplete-splice_match	LMO7	ENST00000341547.8	7237	30	140262	1194	35	1	5prime_fragment	FALSE	canonical	1	169840	junction_9	114259.47592399329	NA	2	NA	TRUE	NA	NA	NA	A	coding	1064	3195	726	3920	10.0	0	True	AATAAA	-17
PB.3198.6	chr13	+	5177	22	novel_in_catalog	AL137782.1	novel	4128	15	NA	NA	234001	52747	no_combination_of_known_junctions	FALSE	canonical	1	90631	junction_2	139811.11130443605	NA	1	NA	TRUE	NA	NA	NA	B	coding	1054	3165	89	3253	20.0	-3549	False	AATAAA	-20
PB.6990.72	chr2	-	7680	45	full-splice_match	FN1	ENST00000421182.5	8103	45	-1	424	0	1	multi-exon	FALSE	canonical	1	1096730	junction_8	2611224.2613735846	NA	0	NA	TRUE	NA	NA	NA	C	coding	2240	6723	267	6989	30.0	-1	True	AATAAA	-16
PB.421.1	chr1	-	4550	18	full-splice_match	NDC1	ENST00000371429.3	5134	18	559	25	162	-25	multi-exon	FALSE	canonical	1	145265	junction_17	87832.13693369357	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	41	2065	60.0	-6	True	AATAAA	-11
PB.3198.1	chr13	+	4993	29	novel_in_catalog	AL137782.1	novel	4128	15	NA	NA	69460	51556	no_combination_of_known_junctions	FALSE	canonical	1	87423	junction_1	137159.3021483466	NA	1	NA	TRUE	NA	NA	NA	B	coding	1297	3894	367	4260	10.0	-5	True	AATAAA	-17
PB.12340.2	chrX	-	8279	26	full-splice_match	HCFC1	ENST00000310441.11	8869	26	580	10	-43	-4	multi-exon	FALSE	canonical	1	245038	junction_17	84290.11184142539	NA	0	NA	TRUE	NA	NA	NA	C	coding	2035	6108	388	6495	35.0	-48	True	ATTAAA	-13
PB.3198.3	chr13	+	4234	27	novel_in_catalog	AL137782.1	novel	4128	15	NA	NA	193535	51310	no_combination_of_known_junctions	FALSE	canonical	1	8054	junction_1	136973.21330155706	NA	15	3	TRUE	NA	NA	NA	B	coding	1064	3195	553	3747	5.0	0	True	ATTAAA	-17
PB.9782.5	chr6	-	3425	5	full-splice_match	C6orf62	ENST00000378119.8	4134	5	-40	749	-40	486	multi-exon	FALSE	canonical	1	1559205	junction_4	195373.53375585444	NA	4	NA	TRUE	NA	NA	NA	C	coding	229	690	2209	2898	65.0	-15	True	AATACA	-9
PB.9969.5	chr6	+	4606	22	novel_in_catalog	CMTR1	novel	457	4	NA	NA	6	-1	intron_retention	FALSE	canonical	1	13272	junction_11	100329.06524135506	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	159	1373	10.0	3	True	ATTAAA	-15
PB.9650.21	chr5	-	2571	2	full-splice_match	DOK3	ENST00000502380.1	997	2	9	-1583	9	1277	multi-exon	FALSE	canonical	1	51499	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	232	588	90.0	27	True	NA	NA
PB.413.7	chr1	+	5317	15	novel_not_in_catalog	ZYG11B	novel	2294	14	NA	NA	-5	-1689	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	45357.28979953701	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	193	2427	100.0	9	True	NA	NA
PB.9969.2	chr6	+	4718	23	novel_in_catalog	CMTR1	novel	457	4	NA	NA	34	6	intron_retention	FALSE	canonical	1	241166	junction_1	59233.64955289663	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	131	2257	0.0	-2	True	ATTAAA	-22
PB.6999.1	chr2	+	2357	1	novel_in_catalog	RUFY4	novel	571	3	NA	NA	3	-31530	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	49	150	271	420	85.0	NA	False	NA	NA
PB.11516.3	chr9	-	3804	17	novel_in_catalog	VCP	novel	4370	17	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	21742	junction_16	856016.8175219288	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	470	2755	40.0	-3	True	ATTAAA	-24
PB.9281.3	chr5	+	1590	10	incomplete-splice_match	BDP1	ENST00000380675.3	2861	18	10	20164	10	-20164	3prime_fragment	FALSE	canonical	1	75245	junction_8	29163.238140499867	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1380	210	1589	65.0	16	True	NA	NA
PB.7481.3	chr21	+	1183	10	incomplete-splice_match	USP16	ENST00000474835.5	3835	17	15	13801	10	5768	3prime_fragment	FALSE	canonical	1	280060	junction_9	78511.27656160822	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1029	154	1182	25.0	-2	True	AATAAA	-8
PB.9281.1	chr5	+	2018	12	incomplete-splice_match	BDP1	ENST00000380675.3	2861	18	-34	14361	10	-14361	3prime_fragment	FALSE	canonical	1	75245	junction_8	28488.28940036024	NA	0	NA	TRUE	NA	NA	NA	B	coding	588	1764	254	2017	50.0	1	True	NA	NA
PB.10317.1	chr6	+	8509	45	incomplete-splice_match	IGF2R	ENST00000647592.1	9084	48	41599	2	-21727	-2	5prime_fragment	FALSE	canonical	1	334520	junction_15	125177.9674800294	NA	0	NA	TRUE	NA	NA	NA	A	coding	2065	6198	847	7044	20.0	NA	False	AATAAA	-13
PB.1234.1	chr1	-	7119	20	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_16	141263.77757019547	NA	0	NA	TRUE	NA	NA	NA	B	coding	1584	4755	344	5098	35.0	-9	True	AATAAA	-18
PB.7481.2	chr21	+	3063	19	novel_not_in_catalog	USP16	novel	2960	18	NA	NA	5	-5	any annotated donor/acceptor	FALSE	canonical	1	1299	junction_2	155454.69174988725	NA	1	NA	TRUE	NA	NA	NA	C	coding	823	2472	296	2767	30.0	-7	True	AATAAA	-12
PB.4698.1	chr17	+	4082	23	full-splice_match	KIF1C	ENST00000320785.9	7919	23	138	3699	132	2437	multi-exon	TRUE	canonical	1	263137	junction_1	291047.5331485129	NA	0	NA	TRUE	NA	NA	NA	A	coding	1103	3312	220	3531	5.0	-6485	False	AATAAA	-16
PB.7481.1	chr21	+	1485	13	incomplete-splice_match	USP16	ENST00000399975.7	2960	18	22	10925	0	8644	3prime_fragment	FALSE	canonical	1	218194	junction_5	94440.79453934207	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1317	169	1485	70.0	-17	True	CATAAA	-44
PB.1234.9	chr1	-	6837	19	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_15	147117.13462476293	NA	1	NA	TRUE	NA	NA	NA	B	coding	1486	4461	357	4817	35.0	2	True	AATAAA	-17
PB.1234.8	chr1	-	6989	20	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-32	0	intron_retention	FALSE	non_canonical	0	0	junction_16	144106.0110172244	NA	0	NA	TRUE	NA	NA	NA	B	coding	1567	4704	266	4969	35.0	-10	True	AATAAA	-17
PB.4327.24	chr16	+	2471	9	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	32	4	any annotated donor/acceptor	FALSE	canonical	1	1676	junction_1	44935.179572913694	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	61	1677	15.0	-4	True	AATAAA	-19
PB.9482.1	chr5	-	1889	10	full-splice_match	SIL1	ENST00000394817.6	1923	10	28	6	28	-6	multi-exon	FALSE	canonical	1	247315	junction_9	99223.63792495077	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	113	1498	35.0	-3	True	ATTAAA	-15
PB.4327.20	chr16	+	2104	9	full-splice_match	IL21R	ENST00000395754.4	2953	9	13	836	13	-424	multi-exon	FALSE	canonical	1	15323	junction_1	40933.89144992661	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	122	1738	20.0	-44	False	AGTAAA	-24
PB.4327.21	chr16	+	2777	8	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	25	-6	any annotated donor/acceptor	FALSE	canonical	1	1110	junction_2	60550.30955616114	NA	6	1	TRUE	NA	NA	NA	C	coding	456	1371	211	1581	35.0	-11	True	AATAAA	-27
PB.4327.22	chr16	+	2925	9	full-splice_match	IL21R	ENST00000395754.4	2953	9	27	1	27	-1	multi-exon	FALSE	canonical	1	15323	junction_1	40933.89144992661	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	108	1724	25.0	-9	True	AATAAA	-32
PB.4327.23	chr16	+	1861	7	novel_not_in_catalog	IL21R	novel	4849	9	NA	NA	29	-429	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	51892.77841215802	NA	7	2	TRUE	NA	NA	NA	C	coding	456	1371	130	1500	25.0	-7	True	AGTAAA	-19
PB.11475.7	chr9	-	2258	2	full-splice_match	RPS6	ENST00000380381.3	892	2	-1	-1365	-1	-1124	multi-exon	FALSE	canonical	1	14744462	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	43	318	90.0	-2	True	NA	NA
PB.413.1	chr1	+	5654	15	novel_not_in_catalog	ZYG11B	novel	2294	14	NA	NA	-76	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	45357.28979953701	NA	1	1	TRUE	NA	NA	NA	C	coding	744	2235	264	2498	20.0	-104	False	AATAAA	-14
PB.8141.1	chr3	-	2018	3	full-splice_match	CISH	ENST00000348721.3	2043	3	57	-32	-2	0	multi-exon	FALSE	canonical	1	63383	junction_2	63603.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	258	777	125	901	25.0	-1	True	AATAAA	-17
PB.533.11	chr1	-	3419	4	incomplete-splice_match	ZNF644	ENST00000337393.9	5763	6	114	22621	-60	-40	3prime_fragment	FALSE	canonical	1	100675	junction_3	51054.425867564765	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3174	245	3418	70.0	148	False	NA	NA
PB.9862.1	chr6	-	2727	19	novel_in_catalog	CCHCR1	novel	2958	18	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	1	9122	junction_18	71742.05928666501	NA	3	NA	TRUE	NA	NA	NA	C	coding	782	2349	226	2574	25.0	-36	False	AATAAA	-17
PB.7481.4	chr21	+	2908	18	novel_not_in_catalog	USP16	novel	2960	18	NA	NA	10	-4	any annotated donor/acceptor	TRUE	canonical	1	21183	junction_8	130869.8737329788	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	1070	2611	30.0	-2	True	AATAAA	-13
PB.5388.5	chr18	-	3794	20	full-splice_match	PPP4R1	ENST00000400555.7	3885	20	-33	124	-33	-5	multi-exon	FALSE	canonical	1	136268	junction_18	119785.04217008795	NA	24	2	TRUE	NA	NA	NA	C	coding	933	2802	119	2920	50.0	2596	False	AATAAA	-17
PB.5871.1	chr19	+	1525	5	novel_not_in_catalog	ZNF486	novel	734	4	NA	NA	-39	-2026	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	20190.062609796434	NA	4	NA	TRUE	NA	NA	NA	A	coding	461	1383	143	1525	35.0	-51	False	NA	NA
PB.5388.4	chr18	-	3840	20	full-splice_match	PPP4R1	ENST00000400556.7	3925	20	-22	107	-11	12	multi-exon	FALSE	canonical	1	76766	junction_18	127582.31506467955	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	97	2949	20.0	-22	True	AATAAA	-34
PB.1299.1	chr10	+	1449	10	incomplete-splice_match	OPTN	ENST00000378757.6	3321	14	-92	12299	-82	2811	3prime_fragment	TRUE	canonical	1	553620	junction_1	178706.7305789634	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1212	238	1449	55.0	-86	True	NA	NA
PB.5388.3	chr18	-	3864	20	full-splice_match	PPP4R1	ENST00000400555.7	3885	20	-33	54	-33	-54	multi-exon	FALSE	canonical	1	136268	junction_18	119785.04217008795	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	119	2920	35.0	2596	False	AATAAA	-18
PB.1299.2	chr10	+	1613	11	incomplete-splice_match	OPTN	ENST00000378747.7	3400	15	-143	12265	-77	2828	3prime_fragment	FALSE	canonical	1	122718	junction_2	328757.48828405415	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1227	385	1611	55.0	-81	True	AAAACA	-12
PB.1582.1	chr10	+	2850	3	antisense	novelGene_LOXL4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	228	junction_1	60.5	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	NA	False	NA	NA
PB.2263.11	chr11	-	3636	17	incomplete-splice_match	NPAT	ENST00000278612.8	6117	18	4	4337	-2	-368	3prime_fragment	FALSE	canonical	1	101650	junction_16	19244.447886013775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1178	3534	103	3636	65.0	-1	True	AATGAA	-25
PB.1299.3	chr10	+	2174	15	full-splice_match	OPTN	ENST00000378747.7	3400	15	-143	1369	-77	-1	multi-exon	FALSE	canonical	1	122718	junction_2	351721.3364035439	NA	4	NA	TRUE	NA	NA	NA	C	coding	577	1734	385	2118	10.0	-81	True	NA	NA
PB.2263.12	chr11	-	3497	17	incomplete-splice_match	NPAT	ENST00000278612.8	6117	18	-46	4526	-46	-557	3prime_fragment	FALSE	canonical	1	101650	junction_16	19244.447886013775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1115	3345	153	3497	60.0	1286	False	NA	NA
PB.3747.2	chr15	-	2680	1	incomplete-splice_match	FMN1	ENST00000616417.4	13529	21	426508	1	92612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	5850	False	AATAAA	-16
PB.3747.3	chr15	-	5535	1	incomplete-splice_match	FMN1	ENST00000616417.4	13529	21	423652	2	89756	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	2994	False	AATAAA	-15
PB.10286.3	chr6	+	4315	4	novel_in_catalog	ARMT1	novel	2495	4	NA	NA	-19	0	intron_retention	FALSE	canonical	1	307258	junction_1	13918.805719840573	NA	3	NA	TRUE	NA	NA	NA	C	coding	322	969	2360	3328	25.0	15	True	AATAAA	-14
PB.3747.1	chr15	-	4225	1	incomplete-splice_match	FMN1	ENST00000616417.4	13529	21	424963	1	91067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	4305	False	AATAAA	-16
PB.1299.5	chr10	+	2504	15	full-splice_match	OPTN	ENST00000378747.7	3400	15	-116	1012	-50	150	multi-exon	FALSE	canonical	1	122718	junction_2	351721.3364035439	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	358	2091	80.0	-54	True	NA	NA
PB.4048.3	chr15	-	1544	8	full-splice_match	WDR73	ENST00000434634.6	5387	8	42	3801	-3	0	multi-exon	FALSE	canonical	1	159194	junction_7	74640.68024658851	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	20	1156	35.0	-11	True	NA	NA
PB.4048.2	chr15	-	4301	5	novel_in_catalog	WDR73	novel	5387	8	NA	NA	0	-17	intron_retention	FALSE	canonical	1	159194	junction_4	89811.3004095253	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	10	486	75.0	-1	True	NA	NA
PB.4048.1	chr15	-	1835	8	full-splice_match	WDR73	ENST00000434634.6	5387	8	50	3502	-2	-15	multi-exon	TRUE	canonical	1	159194	junction_7	74640.68024658851	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	12	1148	75.0	-3	True	NA	NA
PB.7909.1	chr3	+	5737	13	novel_in_catalog	EDEM1	novel	978	8	NA	NA	-54	6	combination_of_known_junctions	FALSE	canonical	1	5907	junction_1	152969.487562857	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	127	1692	15.0	2	True	ATTAAA	-22
PB.7909.6	chr3	+	6041	11	novel_in_catalog	EDEM1	novel	978	8	NA	NA	-13	3	no_combination_of_known_junctions	FALSE	canonical	1	49698	junction_8	138296.38001393963	NA	4	NA	TRUE	NA	NA	NA	C	coding	483	1452	190	1641	5.0	0	True	ATTAAA	-19
PB.1299.6	chr10	+	2301	14	full-splice_match	OPTN	ENST00000378757.6	3321	14	-9	1029	1	150	multi-exon	FALSE	canonical	1	553620	junction_1	225346.40283773188	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	155	1888	80.0	-3	True	NA	NA
PB.4048.5	chr15	-	3967	5	novel_in_catalog	WDR73	novel	5387	8	NA	NA	-15	-11	intron_retention	FALSE	canonical	1	56791	junction_4	122091.0007747807	NA	0	NA	TRUE	NA	NA	NA	C	coding	47	144	380	523	45.0	4062	False	NA	NA
PB.4048.4	chr15	-	2130	7	novel_in_catalog	WDR73	novel	5387	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	56791	junction_6	102003.22278473471	NA	1	NA	TRUE	NA	NA	NA	C	coding	47	144	357	500	35.0	-8	True	NA	NA
PB.3284.1	chr14	-	1941	5	novel_in_catalog	DUXAP10	novel	1330	8	NA	NA	-3	20	combination_of_known_junctions	TRUE	canonical	1	247	junction_4	373.9527877954649	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-22
PB.2042.1	chr11	-	1280	1	full-splice_match	ZNHIT2	ENST00000310597.5	1306	1	25	1	-10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	403	1212	31	1242	5.0	-11	True	AATAAA	-14
PB.7909.9	chr3	+	2289	12	full-splice_match	EDEM1	ENST00000256497.8	6146	12	34	3823	-13	-3823	multi-exon	FALSE	canonical	1	218361	junction_1	108025.90711950415	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	190	2073	45.0	0	True	AATAAA	-29
PB.11478.1	chr9	+	5798	43	novel_in_catalog	FOCAD	novel	6096	46	NA	NA	235	-2	no_combination_of_known_junctions	TRUE	canonical	1	481	junction_23	61927.8264958446	NA	0	NA	TRUE	NA	NA	NA	B	coding	1786	5361	114	5474	5.0	-72	False	AGTAAA	-17
PB.459.8	chr1	+	2878	14	full-splice_match	MIER1	ENST00000401042.7	1648	14	127	-1357	127	-3	multi-exon	FALSE	canonical	1	2862	junction_13	110400.2957386057	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	23	1324	25.0	-11	True	AATAAA	-15
PB.2752.3	chr12	-	2663	8	novel_in_catalog	CPM	novel	697	2	NA	NA	0	716	combination_of_known_junctions	FALSE	canonical	1	13140	junction_6	40385.314763297465	NA	4	NA	TRUE	NA	NA	NA	C	coding	322	969	299	1267	85.0	-1	True	NA	NA
PB.469.2	chr1	-	4244	10	novel_in_catalog	DEPDC1	novel	5331	12	NA	NA	-33	-2	intron_retention	FALSE	canonical	1	13416	junction_9	43414.791488900315	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	555	1466	10.0	-23	False	ATTAAA	-15
PB.1299.9	chr10	+	2183	14	full-splice_match	OPTN	ENST00000378757.6	3321	14	-46	1184	-36	-5	multi-exon	FALSE	canonical	1	553620	junction_1	225346.40283773188	NA	2	NA	TRUE	NA	NA	NA	C	coding	577	1734	192	1925	40.0	-40	True	NA	NA
PB.5280.14	chr17	+	3258	10	full-splice_match	SEPT9	ENST00000592951.5	1793	10	87	-1552	0	0	multi-exon	FALSE	canonical	1	42449	junction_1	1080014.6570126824	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	317	1324	35.0	0	True	AATAAA	-21
PB.459.1	chr1	+	4641	15	full-splice_match	MIER1	ENST00000357692.6	4978	15	-31	368	31	-367	multi-exon	FALSE	canonical	1	21367	junction_2	126642.68550975398	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	289	1878	35.0	-9663	False	ATTAAA	-15
PB.459.2	chr1	+	4550	14	full-splice_match	MIER1	ENST00000401041.5	2552	14	-17	-1981	-15	-365	multi-exon	FALSE	canonical	1	48040	junction_2	108530.02335225142	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	88	1785	30.0	-9647	False	ATTAAA	-17
PB.8795.1	chr4	+	3174	1	novel_in_catalog	THEGL	novel	1650	9	NA	NA	1	-62762	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	185	558	68	625	85.0	4	True	NA	NA
PB.5280.10	chr17	+	3204	10	full-splice_match	SEPT9	ENST00000541152.6	3026	10	-180	2	-10	0	multi-exon	FALSE	canonical	1	89190	junction_1	1067192.8121400014	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	263	1270	35.0	-13	True	AATAAA	-21
PB.5280.11	chr17	+	3027	10	full-splice_match	SEPT9	ENST00000591088.5	1691	10	232	-1568	232	0	multi-exon	FALSE	canonical	1	197092	junction_1	1037782.5422432029	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	86	1093	35.0	-14	True	AATAAA	-21
PB.5280.12	chr17	+	2008	3	novel_not_in_catalog	SEPT9	novel	3821	12	NA	NA	240	0	intron_retention	FALSE	non_canonical	0	0	junction_2	98546.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	326	757	30.0	-6	True	AATAAA	-23
PB.5280.13	chr17	+	3184	10	novel_in_catalog	SEPT9	novel	3821	12	NA	NA	-36	0	intron_retention	FALSE	canonical	1	9511	junction_1	1089078.4405937088	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	241	1248	30.0	1	True	AATAAA	-23
PB.378.1	chr1	+	2239	14	full-splice_match	NASP	ENST00000351223.7	1538	14	-54	-647	22	0	multi-exon	FALSE	canonical	1	329978	junction_9	455632.81023260555	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	137	1486	15.0	-6694	False	AATAAA	-15
PB.378.2	chr1	+	2582	15	full-splice_match	NASP	ENST00000350030.7	3207	15	-20	645	-1	2	multi-exon	FALSE	canonical	1	117349	junction_6	539535.6297057306	NA	2	NA	TRUE	NA	NA	NA	C	coding	788	2367	108	2474	10.0	-5	True	AATAAA	-16
PB.378.3	chr1	+	3218	15	full-splice_match	NASP	ENST00000350030.7	3207	15	-19	8	0	-8	multi-exon	FALSE	canonical	1	117349	junction_6	539535.6297057306	NA	3	NA	TRUE	NA	NA	NA	C	coding	788	2367	107	2473	35.0	-4	True	AATAAA	-7
PB.378.4	chr1	+	3416	5	full-splice_match	NASP	ENST00000464190.6	604	5	4	-2816	0	1524	multi-exon	FALSE	canonical	1	813782	junction_1	397120.1216284407	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	1222	2316	80.0	0	True	AAAAAG	-19
PB.378.5	chr1	+	1556	14	full-splice_match	NASP	ENST00000351223.7	1538	14	-20	2	0	1	multi-exon	FALSE	canonical	1	329978	junction_9	455632.81023260555	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	103	1452	20.0	0	True	AATAAA	-12
PB.11005.10	chr8	+	2725	17	novel_not_in_catalog	INTS10	novel	2804	17	NA	NA	134	-2	any annotated donor/acceptor	FALSE	canonical	1	285	junction_1	165213.4203836813	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	465	2465	45.0	210	False	AATAAA	-18
PB.11170.6	chr8	-	3576	1	novel_in_catalog	COPS5	novel	1480	8	NA	NA	15	-465	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-6	True	NA	NA
PB.4950.5	chr17	+	2769	15	full-splice_match	STARD3	ENST00000336308.9	2132	15	81	-718	-1	718	multi-exon	FALSE	canonical	1	411427	junction_1	94705.91230938035	NA	9	NA	TRUE	NA	NA	NA	C	coding	445	1338	138	1475	40.0	-1	True	NA	NA
PB.11170.5	chr8	-	3888	8	novel_in_catalog	PPP1R42	novel	610	4	NA	NA	-5547	-28563	intron_retention	FALSE	canonical	1	32278	junction_2	364223.880035231	NA	0	NA	TRUE	NA	NA	NA	B	coding	197	594	2756	3349	40.0	-19	True	AATAAA	-8
PB.11170.2	chr8	-	3710	7	incomplete-splice_match	COPS5	ENST00000357849.8	1480	8	172	6	8	-3	intron_retention	FALSE	canonical	1	694282	junction_4	140314.86979765663	NA	0	NA	TRUE	NA	NA	NA	B	coding	270	813	2750	3562	25.0	-13	True	AATAAA	-11
PB.7500.5	chr21	-	3851	22	full-splice_match	GART	ENST00000381815.8	3341	22	21	-531	-3	531	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	0	NA	TRUE	NA	NA	NA	C	coding	1010	3033	95	3127	90.0	-6	True	NA	NA
PB.8242.9	chr3	+	2694	4	incomplete-splice_match	ZNF654	ENST00000473136.4	1377	7	-37	7168	-37	-725	3prime_fragment	FALSE	canonical	1	8964	junction_3	26980.889026617835	NA	3	NA	TRUE	NA	NA	NA	C	coding	195	588	84	671	30.0	-29	True	AATAAA	-16
PB.8242.8	chr3	+	2778	5	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-44	1696	no_combination_of_known_junctions	FALSE	canonical	1	10244	junction_3	30875.98737287603	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	91	828	100.0	-36	False	NA	NA
PB.8242.7	chr3	+	5521	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-44	969	-44	-968	multi-exon	FALSE	canonical	1	8964	junction_3	24771.17667995154	NA	3	NA	TRUE	NA	NA	NA	C	coding	1128	3387	91	3477	20.0	-36	False	AATATA	-19
PB.8242.6	chr3	+	6480	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-37	3	-37	-2	multi-exon	FALSE	canonical	1	8964	junction_3	24771.17667995154	NA	3	NA	TRUE	NA	NA	NA	C	coding	1128	3387	84	3470	30.0	-29	True	AATAAA	-19
PB.8242.5	chr3	+	5916	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-56	586	-56	-585	multi-exon	FALSE	canonical	1	8964	junction_3	24771.17667995154	NA	3	NA	TRUE	NA	NA	NA	C	coding	1128	3387	103	3489	60.0	-48	False	AATAAA	-11
PB.7500.4	chr21	-	4143	22	novel_in_catalog	GART	novel	3341	22	NA	NA	0	531	no_combination_of_known_junctions	FALSE	canonical	1	19879	junction_21	214413.89249320148	NA	1	NA	TRUE	NA	NA	NA	C	coding	1010	3033	387	3419	90.0	-1	True	NA	NA
PB.8242.3	chr3	+	3993	8	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-63	-2379	no_combination_of_known_junctions	FALSE	canonical	1	8369	junction_3	26551.633207770854	NA	2	NA	TRUE	NA	NA	NA	C	coding	916	2751	610	3360	85.0	-55	False	AATGAA	-24
PB.8242.2	chr3	+	5362	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-70	1154	-70	-1153	multi-exon	TRUE	canonical	1	8964	junction_3	24771.17667995154	NA	3	NA	TRUE	NA	NA	NA	C	coding	1128	3387	117	3503	25.0	-62	False	AATAAA	-21
PB.8242.1	chr3	+	4072	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-10	2384	-10	-2383	multi-exon	FALSE	canonical	1	8964	junction_3	24771.17667995154	NA	2	NA	TRUE	NA	NA	NA	C	coding	1128	3387	57	3443	80.0	-2	True	AATGAA	-20
PB.8555.2	chr3	-	10545	29	novel_in_catalog	ABCC5	novel	5921	30	NA	NA	8	0	intron_retention	FALSE	canonical	1	83085	junction_24	44246.453330294724	NA	32	NA	TRUE	NA	NA	NA	C	coding	1238	3717	5467	9183	40.0	2	True	AATAAA	-18
PB.4950.6	chr17	+	2035	15	full-splice_match	STARD3	ENST00000336308.9	2132	15	82	15	0	0	multi-exon	FALSE	canonical	1	411427	junction_1	94705.91230938035	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	137	1474	80.0	0	True	ATTAAA	-12
PB.7042.31	chr2	-	2423	6	novel_not_in_catalog	WDFY1	novel	4660	12	NA	NA	0	2788	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	143001.2688357694	NA	2	1	TRUE	NA	NA	NA	C	coding	193	582	52	633	20.0	-1	True	AATAAA	-12
PB.3806.16	chr15	-	1526	5	incomplete-splice_match	ZNF106	ENST00000564754.6	7347	22	-54	35122	-54	673	3prime_fragment	FALSE	canonical	1	182929	junction_4	41805.298751324575	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1200	327	1526	75.0	-73	False	AATACA	-41
PB.9005.8	chr4	+	5788	24	full-splice_match	SMARCA5	ENST00000283131.3	7923	24	231	1904	231	-1904	multi-exon	FALSE	canonical	1	608699	junction_1	234989.39191122877	NA	2	NA	TRUE	NA	NA	NA	C	coding	995	2988	403	3390	60.0	-8	True	AATAAA	-18
PB.859.2	chr1	-	1154	5	novel_not_in_catalog	CD48	novel	1126	4	NA	NA	12	-2	any annotated donor/acceptor	FALSE	canonical	1	12886	junction_4	877356.9226366769	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	215	850	30.0	-1	True	AATAAA	-27
PB.7042.33	chr2	-	1801	5	full-splice_match	WDFY1	ENST00000483061.1	864	5	-23	-914	-1	914	multi-exon	FALSE	canonical	1	288306	junction_4	42489.912791155504	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	75	656	25.0	0	True	ATTAAA	-21
PB.9667.20	chr5	+	4417	16	novel_in_catalog	CANX	novel	585	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	10464	junction_1	1890693.3305995262	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	196	2136	15.0	-37	True	ATTAAA	-18
PB.937.2	chr1	+	5626	23	novel_in_catalog	SUCO	novel	5916	23	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	58393	junction_11	61693.51419225927	NA	0	NA	TRUE	NA	NA	NA	B	coding	1247	3744	312	4055	15.0	-25	True	AATAAA	-20
PB.9933.3	chr6	-	2769	9	full-splice_match	LEMD2	ENST00000293760.9	2958	9	-3	192	-3	38	multi-exon	FALSE	canonical	1	197898	junction_8	121969.42490839405	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	24	1535	25.0	-12	True	AATAAA	-21
PB.9933.1	chr6	-	2949	9	full-splice_match	LEMD2	ENST00000293760.9	2958	9	-11	20	-11	0	multi-exon	FALSE	canonical	1	197898	junction_8	121969.42490839405	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	32	1543	30.0	-20	True	AATAAA	-10
PB.10999.10	chr8	+	6476	39	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-53	0	any annotated donor/acceptor	FALSE	canonical	1	92	junction_23	230496.85500283827	NA	0	NA	TRUE	NA	NA	NA	C	coding	2008	6027	365	6391	50.0	-5731	False	AATAAA	-15
PB.10042.9	chr6	-	3735	19	incomplete-splice_match	DST	ENST00000520645.5	4598	34	48	23624	-2	828	3prime_fragment	FALSE	canonical	1	33236	junction_18	129031.08729908206	NA	0	NA	TRUE	NA	NA	NA	B	coding	829	2490	114	2603	45.0	-3	True	AATAAA	-17
PB.10042.8	chr6	-	4037	18	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-526	179119	-14	829	3prime_fragment	FALSE	canonical	1	54773	junction_17	124626.95696976339	NA	0	NA	TRUE	NA	NA	NA	B	coding	789	2370	535	2904	40.0	-1	True	AATAAA	-18
PB.10999.11	chr8	+	4325	24	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	139797.5413270251	NA	1	NA	TRUE	NA	NA	NA	C	coding	1335	4005	319	4323	60.0	-2	True	GATAAA	-12
PB.10042.3	chr6	-	4749	35	incomplete-splice_match	DST	ENST00000312431.10	17756	95	11	153519	-4	2956	3prime_fragment	FALSE	canonical	1	33236	junction_34	129756.7336680645	NA	2	NA	TRUE	NA	NA	NA	B	coding	1544	4632	116	4747	15.0	-5	True	AAAACA	-10
PB.10042.2	chr6	-	7365	44	incomplete-splice_match	DST	ENST00000370788.6	17657	93	-23	114112	-23	-8	3prime_fragment	TRUE	canonical	1	54773	junction_43	115048.95804425003	NA	2	NA	TRUE	NA	NA	NA	B	coding	2274	6822	544	7365	55.0	8518	False	AAGAAA	-25
PB.10042.1	chr6	-	6998	45	incomplete-splice_match	DST	ENST00000312431.10	17756	95	70	114119	12	-8	3prime_fragment	FALSE	canonical	1	33236	junction_44	119356.98047388985	NA	1	NA	TRUE	NA	NA	NA	B	coding	2314	6942	57	6998	55.0	360	False	AAGAAA	-25
PB.10042.7	chr6	-	4983	32	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-526	165409	-14	-4	3prime_fragment	FALSE	canonical	1	54773	junction_31	126410.54206465583	NA	0	NA	TRUE	NA	NA	NA	B	coding	1469	4410	535	4944	45.0	-1	True	NA	NA
PB.10042.6	chr6	-	4890	33	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-544	155475	-32	21	3prime_fragment	FALSE	canonical	1	54773	junction_32	125867.94062295246	NA	1	NA	TRUE	NA	NA	NA	B	coding	1446	4338	553	4890	50.0	8	True	AAAAAG	-3
PB.10042.5	chr6	-	5219	37	novel_in_catalog	DST	novel	16742	84	NA	NA	-130	2956	combination_of_known_junctions	FALSE	canonical	1	44875	junction_35	137688.03682951283	NA	1	NA	TRUE	NA	NA	NA	B	coding	1682	5046	172	5217	15.0	14	True	AAAACA	-10
PB.10042.4	chr6	-	5061	34	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-539	152540	-27	2956	3prime_fragment	FALSE	canonical	1	54773	junction_33	124040.36140382661	NA	0	NA	TRUE	NA	NA	NA	B	coding	1504	4512	548	5059	15.0	13	True	AAAACA	-10
PB.2540.1	chr12	+	2937	3	full-splice_match	ALG10	ENST00000266483.6	3128	3	188	3	1	-3	multi-exon	FALSE	canonical	1	32005	junction_1	12941.5	NA	13	NA	TRUE	NA	NA	NA	A	coding	473	1422	132	1553	35.0	-27	True	NA	NA
PB.10999.13	chr8	+	6313	38	novel_in_catalog	PCM1	novel	6820	39	NA	NA	11	7	combination_of_known_junctions	FALSE	canonical	1	198012	junction_23	213090.32746997746	NA	0	NA	TRUE	NA	NA	NA	C	coding	1969	5910	301	6210	20.0	-14	True	AATAAA	-33
PB.10999.14	chr8	+	6616	41	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	45228	junction_25	248874.22563555947	NA	1	NA	TRUE	NA	NA	NA	C	coding	2074	6225	299	6523	30.0	-12	True	AATAAA	-23
PB.11181.4	chr8	-	2265	2	full-splice_match	MSC	ENST00000521739.1	362	2	-1043	-860	12	-11	multi-exon	FALSE	canonical	1	2274	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	279	953	10.0	8	True	AATAAA	-43
PB.10999.15	chr8	+	6394	39	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	230538.95999870825	NA	0	NA	TRUE	NA	NA	NA	C	coding	2000	6003	299	6301	30.0	-12	True	AATAAA	-23
PB.11181.5	chr8	-	2019	2	novel_not_in_catalog	MSC	novel	2023	2	NA	NA	56	-21	intron_retention	FALSE	canonical	1	2218	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	235	879	25.0	-3	True	AATAAA	-33
PB.6617.8	chr2	-	3582	2	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-406936	-46658	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	1	FALSE	NA	NA	NA	B	coding	142	429	2866	3294	35.0	NA	False	AAGAAA	-12
PB.6338.7	chr2	-	5749	19	novel_in_catalog	PUM2	novel	6112	20	NA	NA	36	-20	combination_of_known_junctions	TRUE	canonical	1	20573	junction_15	231438.01421632327	NA	26	1	TRUE	NA	NA	NA	C	coding	759	2280	597	2876	30.0	-3	True	AATAAA	-26
PB.10999.17	chr8	+	6209	37	incomplete-splice_match	PCM1	ENST00000519253.5	6443	39	-47	2349	-9	-157	3prime_fragment	FALSE	canonical	1	192825	junction_24	219186.12868715107	NA	0	NA	TRUE	NA	NA	NA	C	coding	1970	5910	299	6208	25.0	-12	True	AATATA	-9
PB.3909.1	chr15	+	1594	8	full-splice_match	TPM1	ENST00000404484.9	943	8	-2	-649	-2	0	multi-exon	FALSE	canonical	1	331679	junction_1	2693929.9802987473	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	108	854	20.0	-20	True	AATAAA	-24
PB.1115.1	chr1	+	3403	10	full-splice_match	FLVCR1	ENST00000366971.8	5939	10	28	2508	28	1461	multi-exon	FALSE	canonical	1	75039	junction_5	46310.87018731318	NA	0	NA	TRUE	NA	NA	NA	A	coding	555	1668	171	1838	100.0	0	True	NA	NA
PB.3861.15	chr15	-	1354	8	novel_not_in_catalog	GABPB1	novel	4816	9	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	111903.53702294176	NA	3	1	TRUE	NA	NA	NA	C	coding	348	1047	170	1216	40.0	-14	True	NA	NA
PB.3861.14	chr15	-	2500	8	full-splice_match	GABPB1	ENST00000396464.7	1401	8	73	-1172	-1	1172	multi-exon	FALSE	canonical	1	127281	junction_7	72533.5374900213	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	142	1188	40.0	-8	True	AATAAA	-11
PB.3861.17	chr15	-	1375	8	full-splice_match	GABPB1	ENST00000396464.7	1401	8	20	6	13	-4	multi-exon	FALSE	canonical	1	127281	junction_7	72533.5374900213	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	195	1241	45.0	19	True	NA	NA
PB.3861.16	chr15	-	1404	8	full-splice_match	GABPB1	ENST00000429662.6	1392	8	-18	6	-18	-4	multi-exon	FALSE	canonical	1	127281	junction_7	87938.95715570348	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	188	1270	45.0	26	False	NA	NA
PB.3861.11	chr15	-	2036	9	full-splice_match	GABPB1	ENST00000380877.7	4816	9	220	2560	3	450	multi-exon	FALSE	canonical	1	127281	junction_8	74837.11197984844	NA	2	NA	TRUE	NA	NA	NA	C	coding	383	1152	205	1356	80.0	9	True	NA	NA
PB.3861.10	chr15	-	2062	9	full-splice_match	GABPB1	ENST00000220429.12	2726	9	-25	689	13	450	multi-exon	FALSE	canonical	1	127281	junction_8	86529.92423569072	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	195	1382	80.0	19	True	NA	NA
PB.3861.13	chr15	-	2518	8	novel_not_in_catalog	GABPB1	novel	4816	9	NA	NA	39	1172	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	120310.20361514798	NA	2	1	TRUE	NA	NA	NA	C	coding	360	1083	124	1206	40.0	32	True	AATAAA	-11
PB.3861.12	chr15	-	2617	8	full-splice_match	GABPB1	ENST00000429662.6	1392	8	-44	-1181	1	1181	multi-exon	FALSE	canonical	1	127281	junction_7	87938.95715570348	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	214	1296	40.0	0	True	AATAAA	-20
PB.11181.1	chr8	-	2482	2	full-splice_match	MSC	ENST00000325509.4	2023	2	0	-459	0	459	multi-exon	FALSE	canonical	1	380834	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	291	911	25.0	-4	True	AATAAA	-19
PB.3861.18	chr15	-	2780	1	full-splice_match	GABPB1-IT1	ENST00000615671.2	5926	1	-270	3416	-270	-3416	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-14	True	NA	NA
PB.9784.9	chr6	-	2835	14	full-splice_match	RIPOR2	ENST00000647136.1	2646	14	-163	-26	0	11	multi-exon	FALSE	canonical	1	27412	junction_13	130977.25738079143	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	258	2099	100.0	-1	True	NA	NA
PB.9784.8	chr6	-	3042	14	full-splice_match	RIPOR2	ENST00000510784.8	3381	14	-270	609	-118	11	multi-exon	FALSE	canonical	1	32074	junction_13	130249.85057861479	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	363	2306	100.0	-1	True	NA	NA
PB.9784.3	chr6	-	5270	22	novel_not_in_catalog	AL512428.1	novel	654	3	NA	NA	-124219	-6915	any annotated donor/acceptor	FALSE	canonical	1	1154	junction_21	125145.35477258619	NA	3	NA	TRUE	NA	NA	NA	B	coding	1018	3057	129	3185	25.0	2723	False	AATAAA	-19
PB.6154.6	chr19	+	1293	2	full-splice_match	ATF5	ENST00000600336.1	682	2	-12	-599	-12	599	multi-exon	FALSE	canonical	1	1235628	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	59	180	192	371	15.0	0	True	NA	NA
PB.9784.1	chr6	-	5534	22	novel_in_catalog	AL512428.1	novel	654	3	NA	NA	-232415	-6912	no_combination_of_known_junctions	FALSE	canonical	1	32074	junction_21	122451.76451248967	NA	2	NA	TRUE	NA	NA	NA	B	coding	1052	3159	288	3446	20.0	-10	True	AATAAA	-22
PB.9784.7	chr6	-	2173	14	novel_in_catalog	RIPOR2	novel	5678	23	NA	NA	-1	-19	combination_of_known_junctions	FALSE	canonical	1	32074	junction_13	140939.92581737894	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	94	1971	70.0	-10	True	TATAAA	-28
PB.9784.6	chr6	-	2163	14	novel_in_catalog	RIPOR2	novel	5678	23	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	47251	junction_1	121921.92583441093	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	80	1942	65.0	763	False	AATAAA	-7
PB.9784.5	chr6	-	3968	22	full-splice_match	RIPOR2	ENST00000643898.1	3348	22	92	-712	-12	712	multi-exon	FALSE	canonical	1	121312	junction_2	113042.43906483923	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	63	3206	60.0	-1	True	AATACA	-7
PB.9784.4	chr6	-	4170	22	full-splice_match	RIPOR2	ENST00000643898.1	3348	22	92	-914	-12	914	multi-exon	FALSE	canonical	1	121312	junction_2	113042.43906483923	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	63	3206	85.0	-1	True	NA	NA
PB.998.24	chr1	-	3222	16	novel_in_catalog	TPR	novel	9708	51	NA	NA	68	-1664	intron_retention	FALSE	canonical	1	379424	junction_15	83590.86701883168	NA	0	NA	TRUE	NA	NA	NA	B	coding	575	1728	230	1957	80.0	-5	True	NA	NA
PB.136.3	chr1	-	1298	9	full-splice_match	CAPZB	ENST00000264202.7	858	9	-68	-372	-6	201	multi-exon	FALSE	canonical	1	2718118	junction_8	500819.58432726486	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	108	926	35.0	-13	True	AAAACA	-5
PB.9071.2	chr4	+	1865	12	full-splice_match	CEP44	ENST00000503780.5	4534	12	217	2452	-10	1192	multi-exon	FALSE	canonical	1	27465	junction_1	35986.13579451797	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	198	1370	30.0	-29	True	AATAAA	-14
PB.6338.19	chr2	-	5909	20	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	-1	-52	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	230131.19367299462	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	1500	3068	30.0	-18	True	TATAAA	-36
PB.467.13	chr1	-	4390	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1464	-74	any annotated donor/acceptor	FALSE	canonical	1	4034	junction_3	301527.73556704115	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	2	True	ATTAAA	-18
PB.11729.1	chr9	-	2292	5	full-splice_match	ZNF883	ENST00000638622.1	2414	5	35	87	3	-87	multi-exon	FALSE	canonical	1	27340	junction_4	6153.901379409651	NA	2	NA	TRUE	NA	NA	NA	A	coding	351	1053	1240	2292	20.0	-1	True	AATACA	-26
PB.9020.9	chr4	+	2867	22	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	47115	-1	intron_retention	FALSE	canonical	1	353	junction_1	64879.152964475084	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	57	2174	15.0	NA	False	AATAAA	-12
PB.3593.5	chr14	+	2843	1	novel_in_catalog	SLIRP	novel	420	4	NA	NA	0	-1093	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.3593.4	chr14	+	3337	2	incomplete-splice_match	SLIRP	ENST00000556956.1	450	3	-2541	1270	0	-37	3prime_fragment	FALSE	canonical	1	3498332	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.3593.3	chr14	+	3007	3	full-splice_match	SLIRP	ENST00000556956.1	450	3	-2546	-11	-5	1	multi-exon	FALSE	canonical	1	2553147	junction_2	472592.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-5	True	AATAAA	-15
PB.3593.2	chr14	+	2270	4	full-splice_match	SLIRP	ENST00000557623.5	865	4	-10	-1395	-10	1395	multi-exon	FALSE	canonical	1	11733	junction_3	1467114.9579091158	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	20	316	45.0	-10	True	AATAAA	-24
PB.3593.1	chr14	+	4820	4	full-splice_match	SLIRP	ENST00000557623.5	865	4	-12	-3943	-12	3943	multi-exon	FALSE	canonical	1	11733	junction_3	1467114.9579091158	NA	2	NA	TRUE	NA	NA	NA	C	coding	98	297	22	318	30.0	-12	True	NA	NA
PB.9071.3	chr4	+	4319	12	full-splice_match	CEP44	ENST00000503780.5	4534	12	214	1	-13	-1	multi-exon	FALSE	canonical	1	27465	junction_1	35986.13579451797	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	201	1373	15.0	-32	True	AATAAA	-16
PB.6338.18	chr2	-	5997	21	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	2	-52	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	247590.4592310203	NA	43	5	TRUE	NA	NA	NA	C	coding	601	1806	1351	3156	30.0	1	True	TATAAA	-36
PB.11702.7	chr9	+	6463	11	novel_in_catalog	FKTN	novel	2576	11	NA	NA	0	-269	intron_retention	FALSE	canonical	1	6044	junction_9	34067.15465664839	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	123	1313	35.0	0	True	AATAAA	-10
PB.3524.11	chr14	+	3436	9	full-splice_match	EXD2	ENST00000409242.5	2496	9	-33	-907	7	0	multi-exon	FALSE	canonical	1	3054	junction_1	56020.43261712082	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	315	2180	35.0	-21	True	AATAAA	-16
PB.1681.43	chr10	+	1983	1	incomplete-splice_match	INPP5F	ENST00000361976.7	5112	20	101116	132	7657	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	177	534	84	617	40.0	-9632	False	AATAAA	-22
PB.78.1	chr1	-	2491	2	full-splice_match	PIK3CD-AS1	ENST00000377320.3	1823	2	-660	-8	-660	8	multi-exon	FALSE	canonical	1	5557	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	167	504	811	1314	35.0	-2731	False	AATAAA	-41
PB.344.5	chr1	+	3214	2	incomplete-splice_match	ZNF691	ENST00000372507.5	1683	3	1	4	1	0	intron_retention	FALSE	canonical	1	25212	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	1700	2554	35.0	13	True	AGTAAA	-12
PB.3600.1	chr14	+	3237	2	novel_not_in_catalog	FLRT2	novel	33679	2	NA	NA	3121	-357	any annotated donor/acceptor	FALSE	canonical	1	31783	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	660	1983	1022	3004	65.0	0	True	TTTAAA	-5
PB.344.6	chr1	+	1672	3	full-splice_match	ZNF691	ENST00000372507.5	1683	3	7	4	-4	0	multi-exon	FALSE	canonical	1	16229	junction_2	4491.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	158	1012	35.0	19	True	AGTAAA	-12
PB.9027.9	chr4	-	3189	14	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	100865.9211978981	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	1004	3127	85.0	-18	True	NA	NA
PB.9027.8	chr4	-	3298	13	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-28	0	intron_retention	FALSE	non_canonical	0	0	junction_12	95426.76856437551	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	1113	3236	85.0	-29	True	NA	NA
PB.344.3	chr1	+	3017	3	novel_in_catalog	ZNF691	novel	1910	4	NA	NA	5	-4	intron_retention	FALSE	canonical	1	4160	junction_2	10526.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	1441	2361	40.0	0	True	AGTAAA	-8
PB.336.3	chr1	-	5393	13	novel_not_in_catalog	FOXJ3	novel	4468	3	NA	NA	-48	2	any annotated donor/acceptor	FALSE	canonical	1	20637	junction_11	103779.59262633236	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	397	2220	5.0	599	False	AATAAA	-30
PB.9027.7	chr4	-	3333	14	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_13	96482.11810688306	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	1148	3271	85.0	-14	True	NA	NA
PB.8470.9	chr3	+	1378	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	33	2058	-7	387	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	217	630	45.0	0	True	AATAAA	-20
PB.9027.3	chr4	-	3543	11	full-splice_match	FBXW7	ENST00000393956.8	3540	11	0	-3	0	-2	multi-exon	FALSE	canonical	1	68943	junction_10	61957.84557584293	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	39	1922	15.0	-1	True	AATAAA	-17
PB.9027.2	chr4	-	4855	16	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	110597.858153864	NA	3	NA	TRUE	NA	NA	NA	C	coding	707	2124	1111	3234	15.0	-22	True	AATAAA	-17
PB.11702.6	chr9	+	6798	10	full-splice_match	FKTN	ENST00000223528.6	7364	10	2	564	0	-86	multi-exon	FALSE	canonical	1	16618	junction_1	24403.338434841902	NA	3	NA	TRUE	NA	NA	NA	C	coding	461	1386	123	1508	85.0	0	True	NA	NA
PB.8470.6	chr3	+	1277	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	8	2184	5	261	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	242	655	45.0	-25	True	NA	NA
PB.336.1	chr1	-	4838	11	novel_in_catalog	FOXJ3	novel	4468	3	NA	NA	-4	3	no_combination_of_known_junctions	FALSE	canonical	1	3204	junction_9	111112.75311304278	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	363	1664	5.0	-5	True	AATAAA	-31
PB.4678.1	chr17	+	1476	4	full-splice_match	CYB5D2	ENST00000301391.7	1910	4	433	1	-13	-1	multi-exon	FALSE	canonical	1	101079	junction_1	59244.120452769166	NA	0	NA	TRUE	NA	NA	NA	A	coding	244	735	128	862	5.0	-13	True	ATTAAA	-24
PB.10717.15	chr7	-	2883	14	novel_not_in_catalog	MCM7	novel	2515	14	NA	NA	71	-1	intron_retention	FALSE	canonical	1	43280	junction_9	678038.1063534154	NA	2	1	TRUE	NA	NA	NA	C	coding	414	1245	1489	2733	10.0	1234	False	AATAAA	-17
PB.7447.1	chr21	+	2285	3	full-splice_match	CU633904.1	ENST00000624461.3	994	3	-93	-1198	-22	65	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	205	567	20.0	NA	False	NA	NA
PB.9081.5	chr4	+	3539	3	full-splice_match	CDKN2AIP	ENST00000504169.1	2721	3	46	-864	2	864	multi-exon	FALSE	canonical	1	136619	junction_2	22092.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	162	1904	25.0	1	True	AATAAA	-17
PB.7447.3	chr21	+	2162	3	full-splice_match	CU633967.1	ENST00000619252.4	549	3	20	-1633	-2	-170	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	185	547	85.0	NA	False	NA	NA
PB.7447.2	chr21	+	2392	4	full-splice_match	CU633904.1	ENST00000625096.3	2247	4	-13	-132	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	245	607	25.0	NA	False	NA	NA
PB.7447.4	chr21	+	1465	2	novel_not_in_catalog	CU633904.1	novel	560	4	NA	NA	-2	-30978	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.336.7	chr1	-	5268	13	novel_not_in_catalog	FOXJ3	novel	4468	3	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	1	1151	junction_10	132294.73185498858	NA	2	NA	TRUE	NA	NA	NA	C	coding	596	1791	316	2106	25.0	1	True	AATAAA	-19
PB.8510.9	chr3	+	4342	8	full-splice_match	MYNN	ENST00000602751.5	2630	8	-32	-1680	-32	1	multi-exon	FALSE	canonical	1	13179	junction_2	74406.04355391394	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	825	1838	20.0	-32	False	TATAAA	-26
PB.8510.8	chr3	+	2434	9	novel_not_in_catalog	MYNN	novel	4999	8	NA	NA	-33	-678	any annotated donor/acceptor	TRUE	canonical	1	74	junction_3	93955.07100304645	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	570	2288	25.0	11	True	AGTAAA	-21
PB.11698.2	chr9	+	1615	6	full-splice_match	NIPSNAP3B	ENST00000374762.3	1752	6	-31	168	-18	-168	multi-exon	FALSE	canonical	1	36276	junction_2	4573.268301772814	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	103	846	30.0	3	True	AATAAA	-15
PB.9081.7	chr4	+	3556	1	novel_in_catalog	CDKN2AIP	novel	2721	3	NA	NA	3	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	452	1359	1432	2790	20.0	2	True	ATTAAA	-25
PB.8510.1	chr3	+	1998	7	novel_in_catalog	MYNN	novel	4999	8	NA	NA	-9	-673	no_combination_of_known_junctions	FALSE	canonical	1	28096	junction_5	75046.19010020133	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	99	1847	15.0	-9	True	AGTAAA	-26
PB.8470.2	chr3	+	2820	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	0	649	0	-649	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	250	663	65.0	-33	True	AATAGA	-31
PB.8510.3	chr3	+	2083	8	full-splice_match	MYNN	ENST00000349841.9	4999	8	565	2351	-9	-672	multi-exon	FALSE	canonical	1	152230	junction_2	34926.75055318032	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	99	1931	15.0	-9	True	AGTAAA	-27
PB.9081.6	chr4	+	2527	3	full-splice_match	CDKN2AIP	ENST00000302350.4	2646	3	101	18	39	-18	multi-exon	FALSE	canonical	1	136788	junction_2	22008.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	797	1774	30.0	-40	False	ATTAAA	-12
PB.8510.5	chr3	+	2684	8	full-splice_match	MYNN	ENST00000602751.5	2630	8	-9	-45	-9	3	multi-exon	FALSE	canonical	1	13179	junction_2	74406.04355391394	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	802	1815	50.0	-9	True	AATAAA	-14
PB.8510.4	chr3	+	4348	8	full-splice_match	MYNN	ENST00000349841.9	4999	8	565	86	-9	-86	multi-exon	FALSE	canonical	1	152230	junction_2	34926.75055318032	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	99	1931	25.0	-9	True	AATAAA	-26
PB.8510.7	chr3	+	2020	9	novel_not_in_catalog	MYNN	novel	4999	8	NA	NA	-9	-672	any annotated donor/acceptor	FALSE	canonical	1	12264	junction_3	89142.66335758864	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	378	1868	15.0	-9	True	AGTAAA	-27
PB.8470.3	chr3	+	4085	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	2	-618	-1	608	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	3	NA	TRUE	NA	NA	NA	C	coding	137	414	248	661	60.0	-31	True	NA	NA
PB.9632.15	chr5	-	2297	5	full-splice_match	KIAA1191	ENST00000393728.6	2243	5	-57	3	1	0	multi-exon	FALSE	canonical	1	18053	junction_3	171765.4642897911	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	2	304	20.0	-33	True	AATAAA	-19
PB.3583.1	chr14	-	5118	10	full-splice_match	ANGEL1	ENST00000251089.6	5176	10	56	2	-23	-2	multi-exon	FALSE	canonical	1	110987	junction_5	45083.74827768242	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	58	2070	90.0	-24	True	NA	NA
PB.3583.2	chr14	-	4216	11	novel_in_catalog	ANGEL1	novel	5176	10	NA	NA	-20	-1067	combination_of_known_junctions	FALSE	canonical	1	3262	junction_10	74444.41715703065	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	359	2233	25.0	-21	True	AATAAA	-21
PB.3583.3	chr14	-	4217	12	novel_not_in_catalog	ANGEL1	novel	5176	10	NA	NA	-28	-1067	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	78200.02143264486	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	63	2234	25.0	-29	True	AATAAA	-21
PB.3583.4	chr14	-	4028	10	full-splice_match	ANGEL1	ENST00000251089.6	5176	10	81	1067	2	-1067	multi-exon	FALSE	canonical	1	110987	junction_5	45083.74827768242	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	33	2045	25.0	1	True	AATAAA	-21
PB.3583.5	chr14	-	4095	11	novel_in_catalog	ANGEL1	novel	5176	10	NA	NA	-25	-1068	combination_of_known_junctions	FALSE	canonical	1	6051	junction_6	71817.52674166662	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	60	1457	25.0	-26	True	AATAAA	-20
PB.9632.13	chr5	-	2402	6	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	47587	junction_3	144821.43628151185	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	2	409	20.0	-51	False	AATAAA	-19
PB.11759.10	chr9	-	3981	7	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	2606	-2	any annotated donor/acceptor	FALSE	canonical	1	429	junction_4	112671.18528179933	NA	20	1	TRUE	NA	NA	NA	C	coding	294	885	472	1356	35.0	-1	True	NA	NA
PB.8470.1	chr3	+	3339	6	full-splice_match	SELENOT	ENST00000471696.5	3469	6	-18	148	-9	-148	multi-exon	FALSE	canonical	1	94427	junction_3	157598.41205240617	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	268	681	45.0	-116	False	NA	NA
PB.12275.1	chrX	-	2523	1	intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-24	False	AATAAA	-21
PB.10186.11	chr6	+	2738	2	full-splice_match	PLN	ENST00000357525.5	2001	2	10	-747	10	747	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	10	True	AATAAA	-15
PB.10186.12	chr6	+	3344	2	full-splice_match	PLN	ENST00000357525.5	2001	2	27	-1370	27	1370	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-3	True	ATTAAA	-19
PB.10186.13	chr6	+	1538	2	full-splice_match	PLN	ENST00000357525.5	2001	2	31	432	31	-432	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	NA	NA
PB.2568.2	chr12	+	1960	3	full-splice_match	SLC48A1	ENST00000442218.2	3010	3	-30	1080	-30	849	multi-exon	FALSE	canonical	1	192551	junction_1	81182.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	128	568	5.0	-60	False	AATACA	-20
PB.2568.3	chr12	+	3033	3	full-splice_match	SLC48A1	ENST00000442218.2	3010	3	-24	1	-24	-1	multi-exon	FALSE	canonical	1	192551	junction_1	81182.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	122	562	10.0	-54	False	AATAAA	-16
PB.2568.1	chr12	+	2370	6	novel_in_catalog	SLC48A1	novel	618	4	NA	NA	-15	847	no_combination_of_known_junctions	FALSE	canonical	1	2551	junction_2	136590.86394719087	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	1649	2131	5.0	-5148	False	AATACA	-18
PB.3930.10	chr15	-	2580	14	novel_in_catalog	CLPX	novel	4695	14	NA	NA	-49	65	combination_of_known_junctions	FALSE	canonical	1	16298	junction_5	141619.24120771344	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	239	1396	25.0	247	False	AATAAA	-19
PB.3930.11	chr15	-	3153	13	novel_in_catalog	CLPX	novel	4695	14	NA	NA	-30	59	intron_retention	FALSE	canonical	1	351583	junction_12	84138.52934777	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	220	1119	35.0	266	False	AATAAA	-13
PB.3930.12	chr15	-	2181	14	full-splice_match	CLPX	ENST00000300107.7	4695	14	3	2511	3	-216	multi-exon	FALSE	canonical	1	351583	junction_13	80845.83778691056	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	187	2088	30.0	-3	True	ATTAAA	-13
PB.3930.13	chr15	-	1962	13	incomplete-splice_match	CLPX	ENST00000300107.7	4695	14	-3	4252	-3	-1957	3prime_fragment	FALSE	canonical	1	351583	junction_12	81257.89643829325	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1770	193	1962	60.0	-9	True	NA	NA
PB.425.5	chr1	-	2597	7	novel_in_catalog	TMEM59	novel	6691	8	NA	NA	-9	1	intron_retention	FALSE	canonical	1	2692968	junction_1	153650.07141165133	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	1896	2465	35.0	2	True	AATAAA	-16
PB.425.4	chr1	-	1333	8	novel_not_in_catalog	TMEM59	novel	6691	8	NA	NA	-2	1	any annotated donor/acceptor	FALSE	canonical	1	1072946	junction_3	639016.6114060393	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	227	1201	35.0	-3	True	AATAAA	-16
PB.425.7	chr1	-	2505	1	novel_in_catalog	TMEM59	novel	6691	8	NA	NA	-54	-5256	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-43	True	NA	NA
PB.425.6	chr1	-	2642	1	novel_in_catalog	TMEM59	novel	6691	8	NA	NA	-30	-5095	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-19	True	NA	NA
PB.11928.1	chr9	-	2564	13	incomplete-splice_match	NSMF	ENST00000265663.12	2981	15	1491	-6	1459	-1	5prime_fragment	TRUE	canonical	1	277645	junction_11	254968.67009370812	NA	0	NA	TRUE	NA	NA	NA	A	coding	327	984	413	1396	0.0	1510	False	ATTAAA	-17
PB.1144.9	chr1	+	2320	20	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	183	-1069	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	508283.1335550249	NA	5	1	TRUE	NA	NA	NA	B	coding	503	1512	127	1638	45.0	-24	True	AATACA	-18
PB.992.7	chr1	-	3117	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	29	1246	29	709	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2193	250	2442	35.0	0	True	AATAAA	-16
PB.240.5	chr1	-	4025	21	novel_in_catalog	PUM1	novel	4631	18	NA	NA	-2	73	combination_of_known_junctions	FALSE	canonical	1	17554	junction_13	151134.48518404888	NA	0	NA	TRUE	NA	NA	NA	C	coding	1154	3465	103	3567	85.0	10	True	NA	NA
PB.35.2	chr1	+	3162	8	novel_not_in_catalog	RER1	novel	3000	6	NA	NA	20	0	intron_retention	FALSE	canonical	1	9473	junction_1	765212.178251235	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	254	844	30.0	-47	False	AATAAA	-22
PB.379.33	chr1	-	2681	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	28	28	combination_of_known_junctions	FALSE	canonical	1	24395	junction_11	228949.86950465458	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1201	2625	45.0	24	False	AGTAAA	-20
PB.9100.1	chr4	-	3707	14	novel_in_catalog	SORBS2	novel	3368	5	NA	NA	-63	-81	combination_of_known_junctions	FALSE	canonical	1	57110	junction_12	69121.98109790697	NA	3	NA	TRUE	NA	NA	NA	C	coding	477	1434	172	1605	10.0	5434	False	AATAAA	-16
PB.379.31	chr1	-	2806	13	full-splice_match	GPBP1L1	ENST00000355105.7	3736	13	67	863	-27	59	multi-exon	FALSE	canonical	1	280510	junction_12	190119.26785288402	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1295	2719	25.0	-37	True	AAGAAA	-20
PB.379.30	chr1	-	3096	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	-4	130	combination_of_known_junctions	FALSE	canonical	1	112552	junction_11	207349.59014246432	NA	5	NA	TRUE	NA	NA	NA	C	coding	474	1425	1243	2667	35.0	972	False	ATTAAA	-9
PB.379.36	chr1	-	2696	13	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	26	59	any annotated donor/acceptor	FALSE	canonical	1	2276	junction_12	242882.27247658256	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1185	2609	25.0	-34	True	AAGAAA	-20
PB.10184.10	chr6	+	3243	5	novel_not_in_catalog	NUS1	novel	4676	5	NA	NA	-6	-823	any annotated donor/acceptor	FALSE	canonical	1	37	junction_1	17602.60499187549	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	1	441	35.0	27	False	AATAAA	-20
PB.10184.11	chr6	+	1739	3	incomplete-splice_match	NUS1	ENST00000368494.3	4676	5	134	15447	134	-15447	3prime_fragment	FALSE	canonical	1	161	junction_1	14401.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	36	782	100.0	167	False	NA	NA
PB.5118.10	chr17	-	4821	30	full-splice_match	SPAG9	ENST00000262013.11	8273	30	-2	3454	-2	-1	multi-exon	FALSE	canonical	1	90347	junction_25	147019.78043512185	NA	1	NA	TRUE	NA	NA	NA	C	coding	1321	3966	212	4177	35.0	-3	True	AATAAA	-16
PB.5118.11	chr17	-	4769	30	novel_in_catalog	SPAG9	novel	8273	30	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	26708	junction_11	155067.69917371482	NA	0	NA	TRUE	NA	NA	NA	C	coding	1305	3918	208	4125	35.0	1	True	AATAAA	-16
PB.5118.12	chr17	-	4198	26	incomplete-splice_match	SPAG9	ENST00000357122.8	4761	29	-2	10958	-2	-2	3prime_fragment	FALSE	canonical	1	324880	junction_21	98774.31873960761	NA	0	NA	TRUE	NA	NA	NA	C	coding	1166	3501	212	3712	30.0	-3	True	AATAAA	-22
PB.5118.13	chr17	-	4235	27	incomplete-splice_match	SPAG9	ENST00000262013.11	8273	30	-2	14433	-2	-7	3prime_fragment	FALSE	canonical	1	90347	junction_22	143933.45492684803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1180	3543	212	3754	25.0	-3	True	AATAAA	-17
PB.8172.11	chr3	-	2236	10	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	86704	junction_8	163702.4527319137	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	614	1546	20.0	-4	True	AATAAA	-14
PB.9100.3	chr4	-	2402	14	novel_in_catalog	SORBS2	novel	3368	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	57110	junction_12	69121.98109790697	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	664	2097	85.0	-1	True	AAGAAA	-39
PB.8172.13	chr3	-	2171	9	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	158261	junction_8	128650.59173779332	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	363	1142	20.0	18	True	AATAAA	-14
PB.8172.12	chr3	-	2441	7	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	158261	junction_6	122295.8494630496	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	361	1140	20.0	20	True	AATAAA	-14
PB.11368.2	chr8	+	7155	3	novel_in_catalog	ZFP41	novel	3284	3	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	23036	junction_1	6524.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	198	597	2729	3325	15.0	-13	True	AGTAAA	-18
PB.8430.44	chr3	-	3500	2	full-splice_match	COPB2	ENST00000504295.1	3524	2	7	17	1	-17	multi-exon	FALSE	canonical	1	930352	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	102	309	90	398	95.0	3	True	NA	NA
PB.8430.43	chr3	-	1353	11	incomplete-splice_match	COPB2	ENST00000333188.9	3360	22	87	12086	1	4748	3prime_fragment	FALSE	canonical	1	930352	junction_10	158807.03016793684	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1257	96	1352	65.0	-3	True	NA	NA
PB.9894.2	chr6	+	1908	9	full-splice_match	PPT2	ENST00000324816.10	2053	9	142	3	3	-1	multi-exon	FALSE	canonical	1	114199	junction_1	90939.58060815708	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	273	1181	15.0	-3	True	AATAAA	-17
PB.9894.1	chr6	+	1808	10	novel_not_in_catalog	PPT2	novel	954	6	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	550	junction_1	140876.4744940636	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	176	1084	15.0	0	True	AATAAA	-14
PB.8430.40	chr3	-	2708	21	incomplete-splice_match	COPB2	ENST00000333188.9	3360	22	84	809	0	-383	3prime_fragment	FALSE	canonical	1	930352	junction_20	254827.91705739388	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2610	99	2708	60.0	-6	True	NA	NA
PB.35.5	chr1	+	2480	7	full-splice_match	RER1	ENST00000605895.5	3044	7	-26	590	-21	-588	multi-exon	FALSE	canonical	1	563752	junction_1	466547.83435272984	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	160	750	20.0	-35	False	ATTAAA	-13
PB.403.1	chr1	-	3521	30	novel_in_catalog	NRDC	novel	1660	16	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	17925	junction_25	388931.8887292318	NA	1	NA	TRUE	NA	NA	NA	C	coding	1119	3360	122	3481	25.0	-10	True	AATAAA	-40
PB.9071.8	chr4	+	4377	11	novel_in_catalog	CEP44	novel	4534	12	NA	NA	8	-1	intron_retention	FALSE	canonical	1	11460	junction_10	44404.908234225644	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	297	1388	15.0	-10	True	AATAAA	-16
PB.1052.1	chr1	+	2409	3	full-splice_match	SNRPE	ENST00000367208.1	355	3	-2028	-26	-6	0	multi-exon	FALSE	canonical	1	9854	junction_1	260618.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-2	True	AATAAA	-21
PB.9100.7	chr4	-	4179	5	novel_in_catalog	SORBS2	novel	5529	15	NA	NA	0	3193	combination_of_known_junctions	FALSE	canonical	1	719	junction_4	119243.54115711048	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	154	516	25.0	-1	True	AATAAA	-13
PB.2660.1	chr12	-	874	11	full-splice_match	SARNP	ENST00000336133.7	926	11	32	20	0	-20	multi-exon	FALSE	canonical	1	240752	junction_1	364348.1133230142	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	24	656	80.0	-3	True	NA	NA
PB.6764.2	chr2	+	1884	16	novel_not_in_catalog	KYNU	novel	15316	14	NA	NA	-30	133	any annotated donor/acceptor	FALSE	canonical	1	5003	junction_13	189231.88594744453	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	216	1292	45.0	-1	True	AATAAA	-14
PB.2660.3	chr12	-	3530	7	full-splice_match	DNAJC14	ENST00000317269.7	3330	7	7	-207	7	207	multi-exon	FALSE	canonical	1	181050	junction_6	96999.8296487622	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	198	2306	65.0	-7	True	ATTAAA	-16
PB.2660.2	chr12	-	3080	17	novel_in_catalog	SARNP	novel	1163	12	NA	NA	-11856	-20	intron_retention	FALSE	canonical	1	4081	junction_10	305319.3701519771	NA	1	NA	TRUE	NA	NA	NA	C	coding	893	2682	181	2862	80.0	10	True	NA	NA
PB.2660.5	chr12	-	3294	7	full-splice_match	DNAJC14	ENST00000317269.7	3330	7	13	23	13	-23	multi-exon	FALSE	canonical	1	181050	junction_6	96999.8296487622	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	192	2300	5.0	-1	True	TATAAA	-17
PB.2660.4	chr12	-	3608	7	novel_in_catalog	AC023055.1	novel	1807	16	NA	NA	-2041	-17292	intron_retention	FALSE	canonical	1	46891	junction_6	139109.29974633857	NA	1	NA	TRUE	NA	NA	NA	B	coding	702	2109	504	2612	5.0	-1	True	TATAAA	-19
PB.2660.6	chr12	-	3284	7	novel_in_catalog	AC023055.1	novel	1807	16	NA	NA	-3278	-17298	intron_retention	FALSE	canonical	1	16003	junction_6	149494.27124781962	NA	1	NA	TRUE	NA	NA	NA	B	coding	702	2109	186	2294	15.0	6403	False	TATAAA	-13
PB.9100.9	chr4	-	1964	6	full-splice_match	SORBS2	ENST00000492810.5	780	6	-558	-626	0	366	multi-exon	FALSE	canonical	1	86559	junction_1	121214.16859591952	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	664	1128	30.0	-1	True	ATTAAA	-20
PB.8170.15	chr3	+	2121	15	novel_in_catalog	GNL3	novel	547	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	9413	junction_1	521763.615384483	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	291	1904	45.0	-6224	False	AATAAA	-19
PB.8170.14	chr3	+	2824	13	novel_not_in_catalog	GNL3	novel	547	6	NA	NA	2	-1	intron_retention	FALSE	canonical	1	27095	junction_8	557969.4106150232	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	720	1451	40.0	2	True	AATAAA	-18
PB.8170.13	chr3	+	2168	14	full-splice_match	GNL3	ENST00000496254.5	2118	14	-17	-33	0	0	multi-exon	FALSE	canonical	1	1036169	junction_6	368482.2632006102	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	1136	1951	45.0	0	True	AATAAA	-19
PB.8170.12	chr3	+	2589	14	novel_in_catalog	GNL3	novel	547	6	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1036169	junction_5	361981.31913285214	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	722	2374	40.0	0	True	AATAAA	-17
PB.9163.10	chr5	+	3471	9	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	4	-12	combination_of_known_junctions	FALSE	canonical	1	18845	junction_2	62787.307054128185	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	251	1327	45.0	2	True	ATTAAA	-23
PB.9163.11	chr5	+	2763	6	incomplete-splice_match	C5orf22	ENST00000510659.5	3117	9	6067	1	181	-1	5prime_fragment	FALSE	canonical	1	193940	junction_5	13598.09455769447	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	1	858	30.0	190	False	AATAAA	-17
PB.12381.1	chrY	+	5257	8	full-splice_match	ZFY	ENST00000383052.5	5113	8	-140	-4	-140	4	multi-exon	FALSE	canonical	1	12211	junction_1	12454.648732952064	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	335	2740	35.0	-240	False	AATAAA	-45
PB.10921.9	chr7	+	4961	1	full-splice_match	REPIN1	ENST00000425389.2	2876	1	-2081	-4	186	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	556	1671	2193	3863	10.0	-9	True	AATAAA	-20
PB.12381.3	chrY	+	5027	8	novel_not_in_catalog	ZFY	novel	5113	8	NA	NA	3728	4	any annotated donor/acceptor	FALSE	canonical	1	285	junction_1	16009.628183422268	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	105	2510	35.0	3998	False	AATAAA	-45
PB.12381.2	chrY	+	5183	8	full-splice_match	ZFY	ENST00000155093.7	5239	8	61	-5	33	4	multi-exon	FALSE	canonical	1	12179	junction_1	12463.674583462494	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	261	2666	35.0	157	False	AATAAA	-45
PB.1930.1	chr11	+	3336	7	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	-6	0	intron_retention	FALSE	canonical	1	138349	junction_1	94802.91164788487	NA	1	NA	TRUE	NA	NA	NA	B	coding	321	966	94	1059	5.0	-6521	False	AATAAA	-13
PB.1930.2	chr11	+	2612	9	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	6	1	intron_retention	FALSE	canonical	1	17344	junction_7	141448.0312406623	NA	2	NA	TRUE	NA	NA	NA	B	coding	158	477	889	1365	5.0	-21	True	AATAAA	-15
PB.1930.3	chr11	+	2434	9	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	6	-1	intron_retention	FALSE	canonical	1	138349	junction_1	91219.8998272855	NA	2	NA	TRUE	NA	NA	NA	B	coding	340	1023	82	1104	10.0	-21	True	AATAAA	-11
PB.1930.4	chr11	+	3046	9	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	8	1	intron_retention	FALSE	canonical	1	138349	junction_1	83856.74308670338	NA	1	NA	TRUE	NA	NA	NA	B	coding	321	966	80	1045	5.0	-19	True	AATAAA	-15
PB.1930.5	chr11	+	2216	10	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	55177	junction_9	116026.01602365304	NA	0	NA	TRUE	NA	NA	NA	B	coding	321	966	80	1045	5.0	-19	True	AATAAA	-13
PB.1930.6	chr11	+	2194	9	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	17344	junction_7	158164.29938358403	NA	1	NA	TRUE	NA	NA	NA	B	coding	289	870	80	949	5.0	-19	True	AATAAA	-13
PB.1930.7	chr11	+	2448	10	novel_not_in_catalog	SLC39A13	novel	1805	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	3964	junction_6	128275.48141816395	NA	1	NA	TRUE	NA	NA	NA	B	coding	295	888	77	964	5.0	-16	True	AATAAA	-18
PB.1930.8	chr11	+	2301	10	novel_in_catalog	SLC39A13	novel	1805	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	138349	junction_1	86767.79353830645	NA	1	NA	TRUE	NA	NA	NA	B	coding	364	1095	71	1165	5.0	-10	True	AATAAA	-17
PB.6884.7	chr2	+	4743	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	2	15384	2	-945	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	2	NA	TRUE	NA	NA	NA	C	coding	793	2382	414	2795	65.0	14	True	TATAAA	-44
PB.9447.11	chr5	+	2903	19	novel_not_in_catalog	HSPA4	novel	4825	19	NA	NA	75	1	intron_retention	FALSE	canonical	1	658	junction_1	486110.3351489076	NA	4	NA	TRUE	NA	NA	NA	C	coding	854	2565	297	2861	20.0	3	True	ATTAAA	-20
PB.9447.10	chr5	+	4084	19	full-splice_match	HSPA4	ENST00000304858.6	4825	19	72	669	72	-669	multi-exon	FALSE	canonical	1	746881	junction_1	385561.1102680237	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	218	2740	25.0	0	True	NA	NA
PB.85.1	chr1	-	2531	7	novel_not_in_catalog	DFFA	novel	6032	6	NA	NA	-22	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	216642.3912775896	NA	12	1	TRUE	NA	NA	NA	C	coding	331	996	91	1086	25.0	-5	True	AATAAA	-30
PB.992.2	chr1	-	4118	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	24	250	24	-250	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	255	2447	50.0	-5	True	AATAAA	-25
PB.10884.5	chr7	-	3414	16	novel_not_in_catalog	SLC37A3	novel	3488	16	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	65944.2230782618	NA	3	NA	TRUE	NA	NA	NA	C	coding	237	714	170	883	25.0	-1	True	AATAAA	-16
PB.635.47	chr1	-	3097	19	full-splice_match	CSDE1	ENST00000339438.10	4006	19	-1	910	-1	-21	multi-exon	FALSE	canonical	1	1441617	junction_1	1263348.642629662	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	448	2751	30.0	-2	True	AATATA	-25
PB.35.7	chr1	+	3035	7	full-splice_match	RER1	ENST00000605895.5	3044	7	7	2	-3	0	multi-exon	FALSE	canonical	1	563752	junction_1	466547.83435272984	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	127	717	30.0	-2	True	AATAAA	-22
PB.8545.17	chr3	-	1736	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	-1	1412	-1	846	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	51	830	15.0	-2	True	AATACA	-14
PB.8545.16	chr3	-	1898	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	25	1224	7	1034	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	25	804	30.0	5404	False	AATATA	-38
PB.8545.15	chr3	-	2038	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	-10	1119	-10	-1119	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	60	839	15.0	-11	True	NA	NA
PB.564.2	chr1	+	3031	11	novel_in_catalog	TRMT13	novel	476	5	NA	NA	-6	-75	intron_retention	FALSE	canonical	1	42379	junction_5	47155.23642661544	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	119	1429	35.0	-19	True	ATTAAA	-34
PB.8545.12	chr3	-	2485	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	27	635	9	-635	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	23	802	65.0	5406	False	NA	NA
PB.8545.11	chr3	-	2835	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	0	312	0	-312	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	50	829	15.0	-1	True	TATAAA	-19
PB.8545.10	chr3	-	2956	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	30	161	12	-161	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	20	799	45.0	5409	False	TATAAA	-25
PB.3628.2	chr14	+	2709	12	novel_in_catalog	GOLGA5	novel	2969	13	NA	NA	75	-14	no_combination_of_known_junctions	FALSE	canonical	1	1860	junction_6	135059.87245717642	NA	2	NA	TRUE	NA	NA	NA	C	coding	674	2025	182	2206	30.0	-22	True	AATAAA	-16
PB.3628.3	chr14	+	2644	13	novel_not_in_catalog	GOLGA5	novel	2969	13	NA	NA	75	28	any annotated donor/acceptor	FALSE	canonical	1	6547	junction_2	139630.501540375	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	182	2266	20.0	-22	True	AATAAA	-13
PB.3628.1	chr14	+	2728	13	full-splice_match	GOLGA5	ENST00000163416.6	2969	13	105	136	105	31	multi-exon	FALSE	canonical	1	149401	junction_1	103767.76141257162	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	152	2347	15.0	8	True	AATAAA	-16
PB.1477.2	chr10	-	1861	20	novel_in_catalog	CAMK2G	novel	3563	19	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	195498	junction_19	103790.1817621037	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	90	1646	90.0	-8	True	NA	NA
PB.3628.7	chr14	+	2884	10	incomplete-splice_match	GOLGA5	ENST00000163416.6	2969	13	106	5827	106	-5660	3prime_fragment	FALSE	canonical	1	149401	junction_1	99275.16736355436	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	151	2175	25.0	9	True	AATAAA	-39
PB.3628.4	chr14	+	4474	12	novel_in_catalog	GOLGA5	novel	2969	13	NA	NA	77	28	intron_retention	FALSE	canonical	1	149401	junction_1	108209.18216289982	NA	9	NA	TRUE	NA	NA	NA	C	coding	684	2055	180	2234	20.0	-20	True	AATAAA	-13
PB.1477.1	chr10	-	1768	19	full-splice_match	CAMK2G	ENST00000351293.7	3563	19	-6	1801	-6	-2	multi-exon	FALSE	canonical	1	46879	junction_6	128137.38441330832	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	65	1552	90.0	17	True	NA	NA
PB.10518.14	chr7	-	2856	9	novel_in_catalog	POLM	novel	2444	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	67766	junction_4	26647.937448327968	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	188	1045	50.0	-1	True	NA	NA
PB.992.3	chr1	-	3307	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	126	959	126	-959	multi-exon	FALSE	canonical	1	100917	junction_14	35147.46107974288	NA	4	NA	TRUE	NA	NA	NA	C	coding	730	2193	153	2345	55.0	97	False	TATAAA	-10
PB.35.6	chr1	+	3213	8	novel_not_in_catalog	RER1	novel	3000	6	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	29518	junction_1	728408.6572363464	NA	3	NA	TRUE	NA	NA	NA	C	coding	231	696	201	896	30.0	-33	False	AATAAA	-21
PB.813.6	chr1	-	4158	22	full-splice_match	ARHGEF2	ENST00000361247.8	4149	22	-49	40	-49	-38	multi-exon	FALSE	canonical	1	284420	junction_21	139477.44063942478	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	150	3110	70.0	0	True	NA	NA
PB.277.4	chr1	-	2400	11	novel_in_catalog	SFPQ	novel	440	2	NA	NA	3	-1	intron_retention	FALSE	canonical	1	307041	junction_3	1672665.0530780393	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	97	1728	5.0	-1	True	AATAAA	-16
PB.9579.22	chr5	+	1660	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	10	1133	1	-8	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	134	1534	15.0	-1	True	TATAAA	-23
PB.6443.33	chr2	-	2085	5	novel_in_catalog	LRPPRC	novel	6335	38	NA	NA	0	-1451	intron_retention	FALSE	canonical	1	374963	junction_4	258234.59603043122	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	43	708	90.0	-1	True	NA	NA
PB.6873.2	chr2	+	2108	8	full-splice_match	PLEKHA3	ENST00000234453.9	13880	8	3	11769	3	732	multi-exon	FALSE	canonical	1	200	junction_7	30611.610686409927	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	400	1302	15.0	-6	True	AATAAA	-19
PB.11712.27	chr9	+	4019	3	full-splice_match	AKAP2	ENST00000485762.1	363	3	113	-3769	113	-337	multi-exon	FALSE	canonical	1	41092	junction_1	158867.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	16	True	ATTAAA	-11
PB.6884.9	chr2	+	4146	23	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-17	663	no_combination_of_known_junctions	FALSE	canonical	1	7027	junction_9	218965.78267531583	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	1262	2770	45.0	-5	True	ATTAAA	-18
PB.9100.6	chr4	-	6732	5	full-splice_match	SORBS2	ENST00000476311.5	571	5	-577	-5584	0	-1504	multi-exon	FALSE	canonical	1	57110	junction_3	100011.52713687558	NA	3	NA	TRUE	NA	NA	NA	C	coding	139	420	664	1083	80.0	-1	True	AATAAA	-15
PB.11712.24	chr9	+	1449	3	full-splice_match	AKAP2	ENST00000485762.1	363	3	95	-1181	95	-322	multi-exon	FALSE	canonical	1	41092	junction_1	158867.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-2	True	AAGAAA	-21
PB.8473.10	chr3	+	4870	11	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	569	-3	combination_of_known_junctions	FALSE	canonical	1	30359	junction_1	391026.3916127529	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	834	2036	75.0	59	True	TTTAAA	-6
PB.11712.21	chr9	+	3381	4	full-splice_match	AKAP2	ENST00000259318.7	3101	4	24	-304	24	226	multi-exon	FALSE	canonical	1	30860	junction_1	158268.51259173444	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	184	2763	35.0	12	True	CATAAA	-12
PB.9579.25	chr5	+	2353	13	novel_not_in_catalog	G3BP1	novel	535	4	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	1	19725	junction_12	366915.88682931545	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	101	1441	45.0	1	True	ATTAAA	-21
PB.9579.26	chr5	+	3088	12	novel_in_catalog	G3BP1	novel	535	4	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	1	12750	junction_1	360158.1126953104	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	427	1827	45.0	-4654	False	ATTAAA	-21
PB.2721.1	chr12	-	6462	10	full-splice_match	PPM1H	ENST00000228705.6	6353	10	-113	4	-113	-4	multi-exon	FALSE	canonical	1	79419	junction_4	11542.035898894008	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	463	1959	20.0	-1	True	AATAAA	-34
PB.2721.3	chr12	-	2088	1	incomplete-splice_match	PPM1H	ENST00000228705.6	6353	10	288955	13	74938	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1824	False	AATAAA	-25
PB.2721.2	chr12	-	5271	7	novel_not_in_catalog	PPM1H	novel	6353	10	NA	NA	12461	-5	any annotated donor/acceptor	FALSE	canonical	1	65	junction_6	39082.93215892186	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	128	769	20.0	NA	False	AATAAA	-33
PB.2721.5	chr12	-	3471	10	full-splice_match	PPM1H	ENST00000228705.6	6353	10	-113	2995	-113	1597	multi-exon	FALSE	canonical	1	79419	junction_4	11542.035898894008	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	415	1959	60.0	-1	True	ATTAAA	-16
PB.8336.1	chr3	+	986	6	full-splice_match	EAF2	ENST00000273668.6	992	6	5	1	5	-1	multi-exon	FALSE	canonical	1	165339	junction_2	42084.73946408603	NA	1	NA	TRUE	NA	NA	NA	A	coding	260	783	67	849	20.0	-4	True	ATTAAA	-18
PB.2721.6	chr12	-	3160	10	full-splice_match	PPM1H	ENST00000228705.6	6353	10	-114	3307	-114	1285	multi-exon	FALSE	canonical	1	79419	junction_4	11542.035898894008	NA	3	NA	TRUE	NA	NA	NA	C	coding	514	1545	416	1960	15.0	-2	True	AATAAA	-17
PB.10950.22	chr7	-	3233	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	26	4738	4	-318	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	4	NA	TRUE	NA	NA	NA	C	coding	490	1473	212	1684	50.0	-1	True	AATAAA	-22
PB.4441.2	chr16	+	3462	21	novel_in_catalog	NUP93	novel	2741	22	NA	NA	-6	0	intron_retention	FALSE	canonical	1	367686	junction_6	175477.39824607043	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	128	1687	20.0	-52	False	AATAAA	-14
PB.10950.20	chr7	-	3462	18	novel_in_catalog	LMBR1	novel	7997	17	NA	NA	2	-217	combination_of_known_junctions	FALSE	canonical	1	3183	junction_16	98988.21374700894	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	709	1812	25.0	-11	False	AATAAA	-20
PB.10950.21	chr7	-	3171	16	novel_in_catalog	LMBR1	novel	7997	17	NA	NA	1	-217	no_combination_of_known_junctions	FALSE	canonical	1	11549	junction_13	81180.74285543339	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	340	1521	25.0	1	True	AATAAA	-20
PB.10950.26	chr7	-	2900	18	novel_in_catalog	LMBR1	novel	7997	17	NA	NA	4	51	combination_of_known_junctions	FALSE	canonical	1	19209	junction_12	96253.84885498305	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	824	1762	25.0	-1	True	AATAAA	-15
PB.10950.27	chr7	-	2769	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	27	5201	5	-1	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	211	1683	10.0	0	True	ATTAAA	-13
PB.10950.24	chr7	-	2482	13	novel_in_catalog	LMBR1	novel	7997	17	NA	NA	0	52	combination_of_known_junctions	FALSE	canonical	1	11878	junction_3	89333.19627799654	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	191	1105	20.0	-1	True	AATAAA	-16
PB.10950.25	chr7	-	2919	18	novel_in_catalog	LMBR1	novel	7997	17	NA	NA	5	51	combination_of_known_junctions	FALSE	canonical	1	13897	junction_16	97330.69004930586	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	678	1781	25.0	0	True	AATAAA	-15
PB.3520.1	chr14	-	1422	1	novel_in_catalog	ZFP36L1	novel	727	2	NA	NA	45	-4559	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	152	459	627	1085	40.0	161	False	AATAAA	-16
PB.1942.3	chr11	-	5818	12	full-splice_match	TNKS1BP1	ENST00000358252.7	5795	12	-25	2	0	0	multi-exon	FALSE	canonical	1	183258	junction_11	243375.9679740839	NA	0	NA	TRUE	NA	NA	NA	C	coding	1729	5190	179	5368	15.0	-3	True	AATAAA	-15
PB.10950.28	chr7	-	2634	16	full-splice_match	LMBR1	ENST00000359422.8	4727	16	29	2064	0	50	multi-exon	FALSE	canonical	1	41268	junction_1	69311.39253433658	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	187	1497	25.0	3	True	AATAAA	-14
PB.10950.29	chr7	-	2568	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	48	5381	0	-181	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	190	1662	25.0	0	True	TATAAA	-20
PB.992.1	chr1	-	4128	15	full-splice_match	TRMT1L	ENST00000367506.9	4392	15	253	11	253	-11	multi-exon	TRUE	canonical	1	100917	junction_14	35147.46107974288	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	26	2218	60.0	-13	True	ATTAAA	-8
PB.1942.2	chr11	-	5796	12	novel_in_catalog	TNKS1BP1	novel	4336	7	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	1	42793	junction_11	262923.087102554	NA	0	NA	TRUE	NA	NA	NA	C	coding	1718	5157	183	5339	10.0	-6	True	AATAAA	-22
PB.4441.1	chr16	+	2651	22	novel_not_in_catalog	NUP93	novel	2741	22	NA	NA	-7	5	any annotated donor/acceptor	FALSE	canonical	1	4529	junction_10	213255.60464678367	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2358	129	2486	20.0	-53	False	AATAAA	-25
PB.6853.11	chr2	-	2452	13	full-splice_match	LNPK	ENST00000272748.8	7610	13	50	5108	-1	173	multi-exon	FALSE	canonical	1	92135	junction_12	59236.50127502093	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	199	1485	30.0	524	False	AATAAA	-21
PB.1799.1	chr11	+	3332	24	full-splice_match	PPFIBP2	ENST00000299492.8	3557	24	227	-2	227	-2	multi-exon	FALSE	canonical	1	38703	junction_1	62611.53277958823	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	162	2792	30.0	-2	True	AATAAA	-22
PB.6853.13	chr2	-	2408	14	novel_in_catalog	LNPK	novel	7610	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	13964	junction_11	92370.11186122078	NA	4	1	TRUE	NA	NA	NA	C	coding	353	1062	555	1616	10.0	-13	True	TATAAA	-18
PB.6853.12	chr2	-	2270	13	full-splice_match	LNPK	ENST00000272748.8	7610	13	58	5282	7	-1	multi-exon	FALSE	canonical	1	92135	junction_12	59236.50127502093	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	191	1477	10.0	-21	True	TATAAA	-19
PB.6853.14	chr2	-	3580	10	novel_not_in_catalog	LNPK	novel	7610	13	NA	NA	-2	-6899	any annotated donor/acceptor	FALSE	canonical	1	206	junction_1	91380.79103251621	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	185	907	25.0	-15	True	AATAAA	-11
PB.10946.2	chr7	+	1309	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	67	1634	14	-156	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	145	978	50.0	-6157	False	ATTAAA	-27
PB.1644.15	chr10	+	2918	15	novel_not_in_catalog	ADD3	novel	697	6	NA	NA	613	-1	any annotated donor/acceptor	FALSE	canonical	1	302	junction_1	274377.6395354882	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	183	2207	85.0	-3333	False	NA	NA
PB.1799.2	chr11	+	3562	25	novel_in_catalog	PPFIBP2	novel	484	3	NA	NA	159	4	intron_retention	TRUE	canonical	1	1247	junction_1	70746.97708834553	NA	1	NA	TRUE	NA	NA	NA	C	coding	876	2631	386	3016	25.0	-9785	False	AATAAA	-28
PB.8295.9	chr3	-	3234	6	novel_not_in_catalog	BTLA	novel	3213	5	NA	NA	-122	0	any annotated donor/acceptor	FALSE	canonical	1	6052	junction_5	44015.298483141065	NA	0	NA	TRUE	NA	NA	NA	B	coding	289	870	225	1094	20.0	-60	False	ATTAAA	-15
PB.9724.5	chr6	-	2207	5	novel_not_in_catalog	BLOC1S5-TXNDC5	novel	3030	13	NA	NA	-22	-132462	any annotated donor/acceptor	FALSE	canonical	1	3139	junction_3	66389.83868974228	NA	1	NA	TRUE	NA	NA	NA	B	coding	115	348	195	542	40.0	2	True	ATTAAA	-17
PB.9724.4	chr6	-	2455	6	full-splice_match	BLOC1S5	ENST00000244777.6	2445	6	-16	6	5	-6	multi-exon	FALSE	canonical	1	14308	junction_3	61800.32556742724	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	34	378	40.0	-21	True	ATTAAA	-17
PB.9724.7	chr6	-	2128	4	full-splice_match	BLOC1S5	ENST00000543936.7	368	4	-21	-1739	8	-7	multi-exon	FALSE	canonical	1	8266	junction_2	66558.89266406606	NA	0	NA	TRUE	NA	NA	NA	C	coding	90	273	31	303	40.0	-18	True	ATTAAA	-16
PB.9724.6	chr6	-	2204	4	novel_in_catalog	BLOC1S5-TXNDC5	novel	3030	13	NA	NA	-46	-132462	no_combination_of_known_junctions	FALSE	canonical	1	5792	junction_1	55880.90623817763	NA	1	NA	TRUE	NA	NA	NA	B	coding	110	333	35	367	40.0	-22	True	ATTAAA	-17
PB.9724.1	chr6	-	2364	6	novel_not_in_catalog	BLOC1S5-TXNDC5	novel	3030	13	NA	NA	-46	-130790	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	60746.136546779664	NA	5	1	TRUE	NA	NA	NA	B	coding	187	564	35	598	70.0	-22	True	NA	NA
PB.8513.15	chr3	-	3328	15	novel_in_catalog	PHC3	novel	913	4	NA	NA	0	-1678	combination_of_known_junctions	FALSE	canonical	1	26129	junction_2	66729.66919399344	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2646	35	2680	50.0	-17	True	TATAAA	-11
PB.9724.3	chr6	-	2245	5	full-splice_match	BLOC1S5	ENST00000397457.6	2684	5	22	417	1	-6	multi-exon	FALSE	canonical	1	123200	junction_4	20490.837836701554	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	17	580	40.0	-4	True	ATTAAA	-17
PB.9724.2	chr6	-	2665	5	full-splice_match	BLOC1S5	ENST00000397457.6	2684	5	19	0	1	0	multi-exon	FALSE	canonical	1	123200	junction_4	20490.837836701554	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	20	583	25.0	-7	True	AATAAA	-13
PB.8513.18	chr3	-	3269	16	novel_in_catalog	PHC3	novel	913	4	NA	NA	-1	-1811	combination_of_known_junctions	FALSE	canonical	1	24368	junction_8	73806.86280635124	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	36	3071	45.0	-18	True	AATAAA	-8
PB.5463.1	chr18	+	1102	9	full-splice_match	HAUS1	ENST00000282058.10	1125	9	21	2	21	1	multi-exon	FALSE	canonical	1	179462	junction_4	80171.79730896644	NA	0	NA	TRUE	NA	NA	NA	A	coding	278	837	60	896	5.0	-33	True	ATTAAA	-14
PB.9724.9	chr6	-	1769	5	full-splice_match	BLOC1S5	ENST00000397457.6	2684	5	28	887	-1	-476	multi-exon	FALSE	canonical	1	123200	junction_4	20490.837836701554	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	11	574	60.0	2	True	NA	NA
PB.1273.2	chr10	-	1396	3	full-splice_match	KLF6	ENST00000542957.1	4537	3	72	3069	-16	-19	multi-exon	FALSE	canonical	1	175697	junction_1	423902.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	196	909	85.0	-1	True	NA	NA
PB.10946.7	chr7	+	2892	6	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	1	77870	junction_1	572630.1306800403	NA	6	1	TRUE	NA	NA	NA	C	coding	241	726	204	929	20.0	-6040	False	ATTAAA	-12
PB.11299.6	chr8	-	2146	10	full-splice_match	NUDCD1	ENST00000239690.8	4217	10	313	1758	46	-2	multi-exon	FALSE	canonical	1	240282	junction_6	47067.94576270551	NA	2	NA	TRUE	NA	NA	NA	C	coding	583	1752	63	1814	15.0	14	True	AATAAA	-14
PB.11299.7	chr8	-	1875	10	full-splice_match	NUDCD1	ENST00000239690.8	4217	10	251	2091	-16	-335	multi-exon	FALSE	canonical	1	240282	junction_6	47067.94576270551	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1749	125	1873	30.0	-48	True	AATAAA	-19
PB.6851.11	chr2	-	3968	12	novel_in_catalog	ATF2	novel	4176	14	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	3258	junction_4	143371.38422091588	NA	2	NA	TRUE	NA	NA	NA	C	coding	413	1242	370	1611	15.0	15	True	AATAAA	-24
PB.6851.10	chr2	-	4092	13	novel_in_catalog	ATF2	novel	4176	14	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	3258	junction_4	127803.63284960078	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	305	1735	15.0	-12	True	AATAAA	-24
PB.6851.17	chr2	-	4084	13	novel_not_in_catalog	ATF2	novel	4176	14	NA	NA	158	0	intron_retention	FALSE	canonical	1	4640	junction_12	138325.63628232377	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	401	1729	20.0	357	False	AATAAA	-22
PB.10946.4	chr7	+	1411	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	102	1497	-11	-19	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	110	943	85.0	0	True	TTTAAA	-16
PB.11299.1	chr8	-	3920	10	full-splice_match	NUDCD1	ENST00000239690.8	4217	10	298	-1	31	1	multi-exon	FALSE	canonical	1	240282	junction_6	47067.94576270551	NA	2	NA	TRUE	NA	NA	NA	C	coding	583	1752	78	1829	50.0	-1	True	AATAAA	-24
PB.6725.1	chr2	-	1921	14	full-splice_match	BIN1	ENST00000409400.1	2143	14	188	34	-89	-34	multi-exon	FALSE	canonical	1	300762	junction_4	328953.0898734498	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	148	1467	80.0	-9	True	AATAAA	-12
PB.6725.3	chr2	-	1744	14	novel_not_in_catalog	BIN1	novel	1832	14	NA	NA	-16957	-34	any annotated donor/acceptor	FALSE	canonical	1	101366	junction_13	412190.199970164	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	43	1290	80.0	-16	True	AATAAA	-12
PB.10946.5	chr7	+	4637	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	102	-1729	-11	1729	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	218	943	45.0	0	True	AATAAA	-20
PB.6725.5	chr2	-	1845	13	novel_not_in_catalog	BIN1	novel	1832	14	NA	NA	-17148	-34	any annotated donor/acceptor	FALSE	canonical	1	101366	junction_12	427319.6760713729	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	234	1391	80.0	2897	False	AATAAA	-12
PB.6725.4	chr2	-	1847	14	novel_not_in_catalog	BIN1	novel	1832	14	NA	NA	-17021	-34	any annotated donor/acceptor	FALSE	canonical	1	34252	junction_3	484794.9372722133	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	107	1393	80.0	3024	False	AATAAA	-12
PB.11299.8	chr8	-	3537	9	incomplete-splice_match	NUDCD1	ENST00000239690.8	4217	10	257	2443	-10	-687	3prime_fragment	FALSE	canonical	1	240282	junction_5	46780.976031762904	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	119	1597	10.0	-42	True	AATAAA	-29
PB.6725.6	chr2	-	1824	13	full-splice_match	BIN1	ENST00000348750.8	2074	13	205	45	-82	-34	multi-exon	FALSE	canonical	1	225366	junction_3	336001.0042590295	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	141	1370	80.0	-2	True	AATAAA	-12
PB.3793.11	chr15	+	3211	5	novel_not_in_catalog	OIP5-AS1	novel	676	3	NA	NA	0	3189	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	145348.57774394457	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.3793.10	chr15	+	1383	4	full-splice_match	OIP5-AS1	ENST00000500949.6	8829	4	3	7443	0	310	multi-exon	FALSE	canonical	1	116738	junction_3	105883.58787628777	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-29
PB.11325.8	chr8	-	2641	3	incomplete-splice_match	ZHX1	ENST00000395571.7	5108	4	-149	5617	-149	1462	3prime_fragment	FALSE	canonical	1	102004	junction_2	29186.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1872	768	2639	65.0	-76	False	AAGAAA	-12
PB.3793.12	chr15	+	3268	1	incomplete-splice_match	OIP5-AS1	ENST00000500949.6	8829	4	19259	3	19232	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1381	False	AATAAA	-25
PB.131.1	chr1	+	3225	1	genic	AL035413.1	novel	NA	NA	NA	NA	-2	-26981	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	111	336	1309	1644	20.0	-20	True	AATAAA	-25
PB.11325.2	chr8	-	3493	4	full-splice_match	ZHX1	ENST00000395571.7	5108	4	210	1405	-19	-201	multi-exon	FALSE	canonical	1	102004	junction_3	45496.713817837684	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	409	3030	95.0	-9	True	AGTAAA	-17
PB.87.2	chr1	+	2899	6	full-splice_match	TARDBP	ENST00000240185.7	5367	6	241	2227	-12	0	multi-exon	FALSE	canonical	1	472865	junction_2	288658.82028997486	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	116	1360	30.0	-18	True	AATAAA	-26
PB.11325.1	chr8	-	3680	4	full-splice_match	ZHX1	ENST00000297857.3	5200	4	109	1411	106	-202	multi-exon	FALSE	canonical	1	52718	junction_3	66852.02650796925	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	597	3218	90.0	-1	True	AGTAAA	-16
PB.11325.6	chr8	-	3944	3	incomplete-splice_match	ZHX1	ENST00000395571.7	5108	4	189	3976	-40	-3	3prime_fragment	FALSE	canonical	1	102004	junction_2	29186.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	430	3051	20.0	-30	True	AATAAA	-16
PB.11325.7	chr8	-	4102	4	novel_not_in_catalog	ZHX1-C8orf76	novel	1257	5	NA	NA	-300	-20834	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	66276.36186119118	NA	0	NA	TRUE	NA	NA	NA	A	coding	873	2622	589	3210	20.0	-16	True	AATAAA	-15
PB.11325.4	chr8	-	3339	4	full-splice_match	ZHX1	ENST00000297857.3	5200	4	203	1658	-18	21	multi-exon	FALSE	canonical	1	52718	junction_3	66852.02650796925	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	503	3124	65.0	-8	True	AATAGA	-10
PB.11325.5	chr8	-	4242	3	full-splice_match	ZHX1	ENST00000522595.5	1114	3	-24	-3104	-13	-2	multi-exon	FALSE	canonical	1	52718	junction_2	53829.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	727	3348	15.0	60	False	AATAAA	-17
PB.6998.12	chr2	-	5963	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-24	276	-24	-276	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	775	1593	65.0	-3	True	AATAAA	-22
PB.1240.4	chr1	-	5125	16	novel_in_catalog	HNRNPU	novel	12852	2	NA	NA	-6	128	intron_retention	FALSE	canonical	1	32129	junction_3	2030321.4622829123	NA	2	NA	TRUE	NA	NA	NA	C	coding	804	2415	238	2652	50.0	-3	True	AATAAA	-21
PB.792.2	chr1	+	1422	4	full-splice_match	EFNA1	ENST00000368406.2	1444	4	21	1	9	-1	multi-exon	FALSE	canonical	1	20956	junction_2	215379.07489561025	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	82	633	15.0	1	True	AATAAA	-18
PB.8942.7	chr4	+	4451	16	full-splice_match	ALPK1	ENST00000458497.5	5410	16	27	932	0	10	multi-exon	FALSE	canonical	1	31459	junction_2	21560.968702624556	NA	0	NA	TRUE	NA	NA	NA	C	coding	1244	3735	253	3987	35.0	-31	True	NA	NA
PB.469.6	chr1	-	3338	11	full-splice_match	DEPDC1	ENST00000370966.9	4586	11	141	1107	2	315	multi-exon	FALSE	canonical	1	16198	junction_6	40816.73155324909	NA	2	1	TRUE	NA	NA	NA	C	coding	527	1584	82	1665	35.0	1	True	AATAAA	-18
PB.3461.9	chr14	-	4483	18	novel_not_in_catalog	EXOC5	novel	10589	18	NA	NA	25	201	any annotated donor/acceptor	FALSE	canonical	1	10446	junction_17	124994.81996940271	NA	1	NA	TRUE	NA	NA	NA	C	coding	746	2241	227	2467	15.0	15	True	AATAAA	-13
PB.3461.8	chr14	-	4367	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	136	6086	27	201	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	225	2351	15.0	17	True	AATAAA	-13
PB.8942.9	chr4	+	1600	6	novel_in_catalog	ALPK1	novel	304	2	NA	NA	0	20	combination_of_known_junctions	FALSE	canonical	1	14553	junction_5	22083.156254485002	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	253	756	25.0	-31	True	NA	NA
PB.3461.1	chr14	-	6407	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	118	4064	9	-2088	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	243	2369	35.0	-1	True	AGTAAA	-26
PB.3461.3	chr14	-	5824	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	103	4662	-6	1625	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	258	2384	30.0	-16	True	AATAAA	-21
PB.3461.2	chr14	-	6363	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	35	4191	35	2096	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	326	2452	30.0	-84	False	AATAGA	-15
PB.3461.5	chr14	-	4451	18	novel_not_in_catalog	EXOC5	novel	10589	18	NA	NA	-6	203	any annotated donor/acceptor	FALSE	canonical	1	2685	junction_2	125317.4371876763	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	258	2078	10.0	-16	True	AATAAA	-15
PB.3461.4	chr14	-	4487	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	119	5983	10	304	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	3	NA	TRUE	NA	NA	NA	C	coding	708	2127	242	2368	20.0	0	True	TATAAA	-43
PB.3461.6	chr14	-	4192	17	full-splice_match	EXOC5	ENST00000340918.11	2632	17	9	-1569	9	203	multi-exon	FALSE	canonical	1	7930	junction_14	123221.69267800858	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	243	2174	10.0	-1	True	AATAAA	-15
PB.3261.6	chr13	+	2013	2	full-splice_match	ING1	ENST00000375774.3	2870	2	861	-4	406	4	multi-exon	FALSE	canonical	1	47959	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	238	870	10.0	0	True	NA	NA
PB.3261.5	chr13	+	4273	2	full-splice_match	ING1	ENST00000375774.3	2870	2	861	-2264	406	-4	multi-exon	FALSE	canonical	1	47959	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	238	870	30.0	0	True	AATAAA	-15
PB.3261.4	chr13	+	1716	2	full-splice_match	ING1	ENST00000375774.3	2870	2	860	294	405	-294	multi-exon	FALSE	canonical	1	47959	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	239	871	30.0	-1	True	AATAAA	-23
PB.3261.3	chr13	+	3296	2	full-splice_match	ING1	ENST00000375774.3	2870	2	849	-1275	394	-993	multi-exon	FALSE	canonical	1	47959	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	250	882	45.0	-56	False	AATAAA	-12
PB.3261.2	chr13	+	1997	2	full-splice_match	ING1	ENST00000333219.8	5119	2	856	2266	674	2	multi-exon	FALSE	canonical	1	172684	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	17	856	15.0	-1753	False	NA	NA
PB.3261.1	chr13	+	2171	2	full-splice_match	ING1	ENST00000375775.3	1074	2	-199	-898	-17	2	multi-exon	FALSE	canonical	1	1029	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	398	1030	15.0	0	True	NA	NA
PB.11428.5	chr9	-	3689	17	novel_in_catalog	PUM3	novel	340	4	NA	NA	160	5	intron_retention	FALSE	canonical	1	194131	junction_2	89961.00632843655	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	48	1007	30.0	13	True	TATAAA	-23
PB.9580.2	chr5	-	2807	14	full-splice_match	FAM114A2	ENST00000351797.8	4443	14	-2	1638	0	-63	multi-exon	FALSE	canonical	1	77427	junction_13	44082.693822126894	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	80	1597	20.0	-12	True	AATAAA	-17
PB.6481.2	chr2	+	3610	22	novel_in_catalog	PAPOLG	novel	4263	22	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	16610	junction_1	35832.37283914431	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	224	2302	15.0	-26	True	TTTAAA	-6
PB.6689.1	chr2	+	5129	4	full-splice_match	BCL2L11	ENST00000393256.7	5086	4	-45	2	-30	0	multi-exon	FALSE	canonical	1	83201	junction_1	14794.174131130883	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	319	915	10.0	0	True	AATAAA	-15
PB.6968.1	chr2	+	1102	6	full-splice_match	EEF1B2	ENST00000392222.6	1098	6	-5	1	-5	0	multi-exon	FALSE	canonical	1	10377	junction_3	451455.88707956835	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	381	1058	15.0	-25	True	AATAAA	-14
PB.636.6	chr1	-	5373	4	full-splice_match	SIKE1	ENST00000510745.5	349	4	-166	-4858	-1	-8	multi-exon	FALSE	canonical	1	37846	junction_3	141464.20675916577	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	278	589	50.0	-33	True	AATAAA	-13
PB.10656.5	chr7	+	3536	11	novel_not_in_catalog	GTPBP10	novel	778	7	NA	NA	-3	-1246	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	85441.11681907019	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	51	1214	30.0	-24	True	AATAAA	-17
PB.6689.4	chr2	+	5224	5	full-splice_match	BCL2L11	ENST00000621302.4	5224	5	0	0	0	0	multi-exon	FALSE	canonical	1	22723	junction_4	40599.482204210435	NA	4	NA	TRUE	NA	NA	NA	C	coding	169	510	289	798	10.0	-1	True	AATAAA	-15
PB.7630.5	chr22	+	4557	3	full-splice_match	CRKL	ENST00000354336.7	5325	3	765	3	757	-1	multi-exon	FALSE	canonical	1	506264	junction_1	6224.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	194	585	72	656	10.0	701	False	AATAAA	-26
PB.7630.4	chr22	+	2734	3	full-splice_match	CRKL	ENST00000354336.7	5325	3	-18	2609	-18	-2607	multi-exon	FALSE	canonical	1	506264	junction_1	6224.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	528	1439	30.0	1	True	AAAAAG	-16
PB.7630.6	chr22	+	5059	3	full-splice_match	CRKL	ENST00000354336.7	5325	3	21	245	13	-243	multi-exon	FALSE	canonical	1	506264	junction_1	6224.0	NA	53	NA	TRUE	NA	NA	NA	C	coding	303	912	489	1400	25.0	-22	True	CATAAA	-17
PB.7630.1	chr22	+	3401	4	novel_not_in_catalog	CRKL	novel	5325	3	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	44085	junction_3	220865.76362477627	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	529	1440	10.0	0	True	AATAAA	-26
PB.474.17	chr1	-	3645	10	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-23	-663	intron_retention	FALSE	canonical	1	320958	junction_2	313367.8863187428	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	40	726	10.0	0	True	ATTAAA	-14
PB.7630.3	chr22	+	1961	3	full-splice_match	CRKL	ENST00000354336.7	5325	3	-19	3383	-19	-3381	multi-exon	FALSE	canonical	1	506264	junction_1	6224.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	529	1440	30.0	0	True	NA	NA
PB.7630.2	chr22	+	3253	4	novel_not_in_catalog	CRKL	novel	5325	3	NA	NA	-19	-149	any annotated donor/acceptor	FALSE	canonical	1	44085	junction_3	220865.76362477627	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	529	1440	25.0	0	True	ATTAAA	-17
PB.1593.2	chr10	-	6428	17	full-splice_match	DNMBP	ENST00000324109.8	6400	17	-28	0	-28	0	multi-exon	FALSE	canonical	1	50718	junction_16	44547.8481703592	NA	1	NA	TRUE	NA	NA	NA	C	coding	1577	4734	121	4854	10.0	-35	True	AATAAA	-16
PB.18.5	chr1	-	3237	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	26541	junction_6	424911.66533630964	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	822	1718	25.0	-23	True	NA	NA
PB.7684.12	chr22	+	5700	15	novel_in_catalog	EWSR1	novel	560	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	152248	junction_4	703963.8204906383	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	56	1033	5.0	14	True	AATAAA	-23
PB.7684.13	chr22	+	2213	16	full-splice_match	EWSR1	ENST00000332035.10	1989	16	-44	-180	0	-6	multi-exon	FALSE	canonical	1	44704	junction_5	757978.2673226515	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	56	1858	25.0	14	True	AATAAA	-16
PB.7684.10	chr22	+	2408	17	novel_not_in_catalog	EWSR1	novel	560	5	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	3376	junction_7	734739.0334437204	NA	1	NA	TRUE	NA	NA	NA	C	coding	662	1989	65	2053	25.0	5	True	AATAAA	-16
PB.7684.11	chr22	+	6634	15	novel_in_catalog	EWSR1	novel	560	5	NA	NA	2	-6	intron_retention	FALSE	canonical	1	152248	junction_4	723389.3777262163	NA	24	NA	TRUE	NA	NA	NA	C	coding	317	954	5326	6279	25.0	7	True	AATAAA	-16
PB.7684.16	chr22	+	2137	17	novel_not_in_catalog	EWSR1	novel	560	5	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	727929.1749475442	NA	2	1	TRUE	NA	NA	NA	C	coding	637	1914	50	1963	10.0	20	True	ATTAAA	-15
PB.7684.17	chr22	+	5540	15	novel_in_catalog	EWSR1	novel	560	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	89384	junction_12	737631.2694048021	NA	5	NA	TRUE	NA	NA	NA	C	coding	325	978	45	1022	10.0	25	True	ATTAAA	-15
PB.7684.14	chr22	+	2075	16	novel_in_catalog	EWSR1	novel	560	5	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	31886	junction_12	738155.4781560559	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	54	1901	10.0	16	True	ATTAAA	-15
PB.7684.15	chr22	+	5507	15	novel_in_catalog	EWSR1	novel	560	5	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	152248	junction_4	703963.8204906383	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	52	1029	10.0	18	True	ATTAAA	-14
PB.11428.8	chr9	-	1756	16	incomplete-splice_match	PUM3	ENST00000397885.2	2321	18	146	6208	146	-6205	3prime_fragment	FALSE	canonical	1	219111	junction_15	80599.44050938981	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1695	62	1756	65.0	-1	True	AATAGA	-8
PB.7684.18	chr22	+	2265	17	novel_in_catalog	EWSR1	novel	560	5	NA	NA	2	-6	no_combination_of_known_junctions	FALSE	canonical	1	1387	junction_8	741449.0931968016	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	45	1910	25.0	25	True	AATAAA	-16
PB.7684.19	chr22	+	2151	16	novel_in_catalog	EWSR1	novel	560	5	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	17283	junction_8	718202.46759159	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	45	1031	10.0	25	True	ATTAAA	-15
PB.8628.9	chr3	+	2515	8	novel_in_catalog	SENP5	novel	2491	9	NA	NA	-20	101	no_combination_of_known_junctions	FALSE	canonical	1	9966	junction_6	97139.5889773777	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	181	2226	65.0	5	True	NA	NA
PB.11428.9	chr9	-	2595	8	novel_in_catalog	PUM3	novel	2321	18	NA	NA	177	414	intron_retention	FALSE	canonical	1	219111	junction_7	73156.63763348297	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	31	909	80.0	30	True	NA	NA
PB.297.12	chr1	-	2339	2	full-splice_match	GNL2	ENST00000488496.1	539	2	0	-1800	0	-906	multi-exon	FALSE	canonical	1	506710	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-1	True	NA	NA
PB.3275.1	chr13	+	2517	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-22	-3	any annotated donor/acceptor	FALSE	canonical	1	35450	junction_1	195592.5421551836	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	97	1317	30.0	-54	True	AATAAA	-18
PB.3275.2	chr13	+	2464	11	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-33	-3	any annotated donor/acceptor	FALSE	canonical	1	376	junction_1	197364.82755772368	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	392	1264	30.0	-65	True	AATAAA	-18
PB.3275.3	chr13	+	2450	11	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-23	-4	any annotated donor/acceptor	FALSE	canonical	1	35450	junction_1	195939.78270787688	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	98	1111	25.0	-55	True	AATAAA	-17
PB.3275.4	chr13	+	2441	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-19	-88	any annotated donor/acceptor	FALSE	canonical	1	35450	junction_1	193364.47841236496	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	94	1326	40.0	-51	True	AATAAA	-17
PB.1282.1	chr10	-	3256	8	full-splice_match	IL2RA	ENST00000379959.7	3176	8	-85	5	-40	-5	multi-exon	TRUE	canonical	1	50066	junction_4	11337.946947291288	NA	1	NA	TRUE	NA	NA	NA	A	coding	272	819	260	1078	30.0	8389	False	NA	NA
PB.3275.6	chr13	+	2402	11	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-17	-3	any annotated donor/acceptor	FALSE	canonical	1	35450	junction_1	199222.804261987	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	498	1202	30.0	-49	True	AATAAA	-18
PB.3275.7	chr13	+	2637	12	full-splice_match	TFDP1	ENST00000375370.9	2648	12	8	3	6	-3	multi-exon	FALSE	canonical	1	100555	junction_1	185711.75435021528	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	205	1437	30.0	-4	True	AATAAA	-18
PB.3275.8	chr13	+	2028	12	full-splice_match	TFDP1	ENST00000375370.9	2648	12	-29	649	-9	137	multi-exon	FALSE	canonical	1	100555	junction_1	185711.75435021528	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	242	1474	25.0	-41	True	AATAAA	-18
PB.3275.9	chr13	+	2389	12	novel_not_in_catalog	TFDP1	novel	804	7	NA	NA	-3	-270	any annotated donor/acceptor	FALSE	canonical	1	100555	junction_1	188280.553736498	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	236	1456	35.0	-35	True	ATTAAA	-32
PB.8997.1	chr4	+	1818	4	full-splice_match	SCOC	ENST00000394201.8	1795	4	4	-27	-2	-2	multi-exon	FALSE	canonical	1	570856	junction_2	83415.088712348	NA	1	NA	TRUE	NA	NA	NA	C	coding	82	249	122	370	15.0	-2	True	AATAAA	-15
PB.2947.2	chr12	-	1097	8	full-splice_match	RPLP0	ENST00000392514.8	1218	8	100	21	-1	0	multi-exon	FALSE	canonical	1	8451	junction_3	3369271.408001372	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	78	1031	35.0	-5	True	AATAAA	-14
PB.2947.1	chr12	-	2307	6	novel_in_catalog	RPLP0	novel	1218	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	123960	junction_5	3123652.341518627	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	75	593	20.0	-2	True	AATAAA	-22
PB.635.49	chr1	-	2720	18	full-splice_match	CSDE1	ENST00000530886.5	3459	18	32	707	-8	-55	multi-exon	FALSE	canonical	1	57674	junction_16	1591977.2325184774	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	557	2563	75.0	-13	True	NA	NA
PB.7259.8	chr20	-	2079	10	full-splice_match	UQCC1	ENST00000374385.9	2447	10	154	214	-11	-214	multi-exon	FALSE	canonical	1	247096	junction_9	67731.40565826495	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	25	924	20.0	-15	True	AAAACA	-29
PB.7259.9	chr20	-	3990	9	novel_in_catalog	UQCC1	novel	1921	2	NA	NA	-6	-6	intron_retention	FALSE	canonical	1	247096	junction_8	71507.98382162914	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	20	859	5.0	-10	True	ATTAAA	-16
PB.7259.6	chr20	-	2320	11	novel_in_catalog	UQCC1	novel	1921	2	NA	NA	-11	-15	combination_of_known_junctions	FALSE	canonical	1	6955	junction_8	155289.86436548267	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	25	966	25.0	-15	True	AATAAA	-17
PB.7259.7	chr20	-	1895	6	novel_not_in_catalog	UQCC1	novel	1921	2	NA	NA	0	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	145008.90076405654	NA	4	1	TRUE	NA	NA	NA	C	coding	176	531	11	541	25.0	-1	True	AATAAA	-17
PB.7259.4	chr20	-	2002	7	full-splice_match	UQCC1	ENST00000457259.5	1987	7	-29	14	-11	-14	multi-exon	FALSE	canonical	1	1650	junction_5	137470.17349835078	NA	1	1	TRUE	NA	NA	NA	C	coding	144	435	213	647	25.0	-15	True	AATAAA	-18
PB.7259.5	chr20	-	4861	9	novel_in_catalog	UQCC1	novel	1921	2	NA	NA	0	-14	intron_retention	FALSE	canonical	1	247096	junction_8	71507.98382162914	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	11	850	25.0	-1	True	AATAAA	-18
PB.7259.2	chr20	-	2378	11	novel_in_catalog	UQCC1	novel	1921	2	NA	NA	0	-14	no_combination_of_known_junctions	FALSE	canonical	1	1626	junction_9	157229.55722029496	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	262	1023	25.0	-1	True	AATAAA	-18
PB.7259.3	chr20	-	2280	10	full-splice_match	UQCC1	ENST00000374385.9	2447	10	153	14	-12	-14	multi-exon	FALSE	canonical	1	247096	junction_9	67731.40565826495	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	26	925	25.0	-16	True	AATAAA	-18
PB.7259.1	chr20	-	2170	9	full-splice_match	UQCC1	ENST00000424405.5	758	9	0	-1412	0	-13	multi-exon	TRUE	canonical	1	18282	junction_7	128340.93644761207	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	11	814	20.0	-1	True	AATAAA	-19
PB.9628.3	chr5	+	2305	11	full-splice_match	SFXN1	ENST00000321442.9	4231	11	126	1800	-43	1059	multi-exon	FALSE	canonical	1	522527	junction_7	115766.51700487494	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	129	1097	10.0	10	True	NA	NA
PB.8662.13	chr4	+	1735	6	incomplete-splice_match	NSD2	ENST00000514045.5	3964	9	-65	10976	-28	-10976	3prime_fragment	FALSE	canonical	1	155384	junction_1	161669.82362828258	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1557	177	1733	30.0	3	True	NA	NA
PB.8628.2	chr3	+	3985	7	incomplete-splice_match	SENP5	ENST00000323460.9	6308	10	25	9424	25	-5722	3prime_fragment	FALSE	canonical	1	49296	junction_1	69180.24225026647	NA	3	NA	TRUE	NA	NA	NA	C	coding	676	2031	225	2255	70.0	-39	True	NA	NA
PB.1413.1	chr10	+	3654	4	full-splice_match	DKK1	ENST00000373970.3	1790	4	-14	-1850	-14	1465	multi-exon	FALSE	canonical	1	589013	junction_1	160828.25457473434	NA	0	NA	TRUE	NA	NA	NA	A	coding	251	756	199	954	5.0	1	True	AATAAA	-21
PB.747.21	chr1	-	2464	11	full-splice_match	RFX5	ENST00000392746.7	2056	11	-123	-285	28	-2	multi-exon	FALSE	canonical	1	6497	junction_9	179238.07420537077	NA	3	1	TRUE	NA	NA	NA	C	coding	616	1851	390	2240	15.0	302	False	AATAAA	-14
PB.8628.1	chr3	+	5099	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	2	1207	2	1179	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	3	NA	TRUE	NA	NA	NA	C	coding	755	2268	248	2515	20.0	-62	False	AATAAA	-13
PB.485.10	chr1	+	2798	16	full-splice_match	MIGA1	ENST00000370791.7	5288	16	39	2451	27	-2355	multi-exon	FALSE	canonical	1	81529	junction_15	21145.461347112345	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	90	1892	65.0	5	True	NA	NA
PB.9628.5	chr5	+	2930	11	novel_in_catalog	SFXN1	novel	572	4	NA	NA	-27	-1130	combination_of_known_junctions	FALSE	canonical	1	31949	junction_2	226375.07397593488	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	267	1052	0.0	-32	True	CATAAA	-16
PB.21.2	chr1	+	3473	16	novel_not_in_catalog	ATAD3B	novel	2448	16	NA	NA	-7	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	150492.51246667834	NA	13	2	TRUE	NA	NA	NA	C	coding	602	1809	1278	3086	10.0	-19	True	AATAAA	-20
PB.11199.1	chr8	+	4189	2	novel_not_in_catalog	AC083837.2	novel	2921	6	NA	NA	-821	-102027	any annotated donor/acceptor	FALSE	canonical	1	1353	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	0	True	AATAAA	-11
PB.8628.7	chr3	+	2606	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	70	3632	-19	3	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	180	2447	25.0	6	True	NA	NA
PB.11199.2	chr8	+	3074	4	incomplete-splice_match	AC083837.2	ENST00000649603.1	2921	6	-821	16021	-821	-16021	3prime_fragment	FALSE	canonical	0	0	junction_2	4731.979454261774	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.8628.6	chr3	+	3233	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	41	3034	41	569	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	209	2476	20.0	-23	True	CATAAA	-20
PB.9628.8	chr5	+	2832	10	novel_in_catalog	SFXN1	novel	572	4	NA	NA	-24	-1126	no_combination_of_known_junctions	FALSE	canonical	1	14450	junction_6	241482.97317330114	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	110	895	0.0	-29	True	CATAAA	-20
PB.6610.2	chr2	+	2341	9	full-splice_match	RMND5A	ENST00000283632.4	6301	9	127	3833	127	611	multi-exon	FALSE	canonical	1	308585	junction_1	45539.93366523907	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	369	1544	25.0	1	True	AATAAA	-23
PB.8662.12	chr4	+	2563	10	novel_not_in_catalog	NSD2	novel	4251	22	NA	NA	-28	90	any annotated donor/acceptor	FALSE	canonical	1	5136	junction_9	205980.84070180464	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	177	2066	35.0	3	True	AATAAA	-27
PB.8628.5	chr3	+	2790	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	35	3483	35	120	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	215	2482	25.0	-29	True	ATTAAA	-17
PB.9628.9	chr5	+	1844	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-24	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	110	1078	40.0	-29	True	AATAAA	-10
PB.1075.2	chr1	+	3248	6	novel_not_in_catalog	RASSF5	novel	2064	6	NA	NA	118	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	140761.5195180842	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	292	1011	50.0	-11	True	AATAAA	-11
PB.3067.1	chr13	+	4846	10	full-splice_match	WASF3	ENST00000335327.5	4790	10	-77	21	-30	-16	multi-exon	FALSE	canonical	1	56083	junction_1	27067.533117403374	NA	3	NA	TRUE	NA	NA	NA	A	coding	502	1509	256	1764	30.0	-42	True	AATAAA	-19
PB.11305.2	chr8	-	1236	8	full-splice_match	EIF3H	ENST00000521861.5	3959	8	-2	2725	0	-22	multi-exon	FALSE	canonical	1	3027879	junction_7	752935.7658539821	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	27	1085	70.0	-1	True	NA	NA
PB.1707.4	chr10	-	3223	9	novel_in_catalog	UROS	novel	441	3	NA	NA	-10	0	intron_retention	FALSE	canonical	1	389928	junction_8	143812.04939080862	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	2624	2938	15.0	-11	True	AATAAA	-22
PB.1707.5	chr10	-	2602	10	novel_in_catalog	UROS	novel	441	3	NA	NA	2	0	intron_retention	TRUE	canonical	1	23067	junction_3	236298.04402465236	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	245	727	15.0	9	True	AATAAA	-22
PB.1707.6	chr10	-	1773	10	novel_in_catalog	UROS	novel	441	3	NA	NA	3	302	combination_of_known_junctions	FALSE	canonical	1	45796	junction_1	226393.77403956265	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	281	952	85.0	-1	True	NA	NA
PB.1707.7	chr10	-	3093	7	full-splice_match	UROS	ENST00000368778.7	1556	7	-60	-1477	0	1477	multi-exon	FALSE	canonical	1	25294	junction_1	263062.4773202915	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	255	674	90.0	-1	True	NA	NA
PB.1707.1	chr10	-	1591	11	novel_in_catalog	UROS	novel	441	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	13122	junction_2	274664.165007669	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	263	991	15.0	-9	True	AATAAA	-22
PB.1707.2	chr10	-	1339	10	full-splice_match	UROS	ENST00000368797.9	1342	10	-2	5	-2	0	multi-exon	FALSE	canonical	1	389928	junction_9	138132.22838843786	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	257	1054	15.0	-3	True	AATAAA	-22
PB.1707.3	chr10	-	1460	11	novel_not_in_catalog	UROS	novel	441	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1684	junction_10	282507.23359935405	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	18	1175	15.0	-4	True	AATAAA	-22
PB.11870.1	chr9	+	2922	1	incomplete-splice_match	GTF3C4	ENST00000372146.4	9043	5	21995	4	21995	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-16
PB.5288.1	chr17	-	2680	2	full-splice_match	SOCS3	ENST00000330871.3	2734	2	1	53	1	-53	multi-exon	FALSE	canonical	1	275836	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	214	645	449	1093	55.0	0	True	NA	NA
PB.8614.2	chr3	-	3923	14	novel_in_catalog	TNK2	novel	2641	7	NA	NA	46	-1	intron_retention	FALSE	canonical	1	11947	junction_13	142769.35490851698	NA	2	NA	TRUE	NA	NA	NA	B	coding	1008	3027	82	3108	10.0	4646	False	AATAAA	-20
PB.290.10	chr1	+	2923	12	incomplete-splice_match	THRAP3	ENST00000469141.6	3339	13	-2	2517	-2	-2517	3prime_fragment	FALSE	canonical	1	9511	junction_1	300929.9040552921	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2580	343	2922	60.0	-24	True	NA	NA
PB.5788.1	chr19	-	538	3	full-splice_match	NDUFB7	ENST00000215565.2	531	3	-9	2	-9	-2	multi-exon	FALSE	canonical	1	2329651	junction_2	345367.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	137	414	72	485	25.0	-6	True	AATAAA	-17
PB.11284.47	chr8	-	2196	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-237	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	439036.90812905546	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	591	1682	30.0	-1	True	AATAAA	-20
PB.11284.46	chr8	-	2398	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-181	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	517612.5711917382	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	737	1828	30.0	-1	True	AATAAA	-17
PB.883.1	chr1	+	1277	6	novel_in_catalog	DUSP12	novel	1252	5	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	111599	junction_1	127611.5728331878	NA	2	1	TRUE	NA	NA	NA	A	coding	187	564	500	1063	20.0	-29	True	ATTAAA	-16
PB.9611.4	chr5	+	3274	11	incomplete-splice_match	SPDL1	ENST00000265295.8	2668	12	126	1702	0	1055	3prime_fragment	FALSE	canonical	1	165008	junction_1	72785.01115724309	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	154	2022	75.0	-28	True	NA	NA
PB.9611.5	chr5	+	2607	13	novel_in_catalog	SPDL1	novel	2668	12	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	1	14187	junction_2	126406.6569736341	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	486	2039	30.0	-19	True	AATAAA	-20
PB.9611.6	chr5	+	2675	13	novel_in_catalog	SPDL1	novel	2668	12	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	9458	junction_1	143354.51089916527	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	315	2108	30.0	-15	True	AATAAA	-19
PB.9611.7	chr5	+	2526	12	full-splice_match	SPDL1	ENST00000265295.8	2668	12	139	3	0	-3	multi-exon	FALSE	canonical	1	165008	junction_1	69703.71424230961	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	141	1958	30.0	-15	True	AATAAA	-20
PB.9611.1	chr5	+	2731	13	novel_in_catalog	SPDL1	novel	2668	12	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	9458	junction_1	124526.82694846988	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	346	2163	30.0	-46	True	AATAAA	-20
PB.9611.2	chr5	+	2519	12	novel_in_catalog	SPDL1	novel	2668	12	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	1	13373	junction_7	110137.37676560995	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	164	1957	25.0	-38	True	AATAAA	-14
PB.9611.3	chr5	+	2825	12	novel_in_catalog	SPDL1	novel	2668	12	NA	NA	1	-3	intron_retention	FALSE	canonical	1	7325	junction_1	105051.94419078813	NA	3	1	TRUE	NA	NA	NA	C	coding	605	1818	440	2257	30.0	-37	True	AATAAA	-20
PB.3287.7	chr14	+	2757	13	novel_in_catalog	PARP2	novel	1881	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	187430	junction_1	83784.98937869181	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	15	860	10.0	-7	True	AATAAA	-15
PB.3287.6	chr14	+	1720	15	novel_in_catalog	PARP2	novel	1881	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	27755	junction_14	123316.64566696185	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	28	1491	10.0	-20	True	AATAAA	-14
PB.3287.5	chr14	+	1857	16	novel_in_catalog	PARP2	novel	1881	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	29203	junction_8	118241.95576182855	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	65	847	10.0	-1844	False	AATAAA	-15
PB.3287.4	chr14	+	2252	14	incomplete-splice_match	PARP2	ENST00000429687.7	1881	16	-7	-1	-7	1	intron_retention	FALSE	canonical	1	187430	junction_1	80792.67324154334	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	68	1525	10.0	-1847	False	AATAAA	-18
PB.3287.3	chr14	+	2009	15	incomplete-splice_match	PARP2	ENST00000429687.7	1881	16	-10	-1	-10	1	intron_retention	FALSE	canonical	1	187430	junction_1	77869.89766768357	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	71	1627	10.0	-1850	False	AATAAA	-18
PB.3287.2	chr14	+	1833	16	full-splice_match	PARP2	ENST00000429687.7	1881	16	46	2	0	0	multi-exon	FALSE	canonical	1	187430	junction_1	75561.66014804658	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	15	1727	10.0	-7	True	AATAAA	-15
PB.3287.1	chr14	+	2239	14	novel_in_catalog	PARP2	novel	1881	16	NA	NA	-22	0	intron_retention	FALSE	canonical	1	29203	junction_8	126848.30587599294	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	83	865	5.0	-1862	False	AATAAA	-16
PB.6888.1	chr2	-	2633	2	intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	29761	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	22	False	NA	NA
PB.6888.3	chr2	-	2630	1	antisense	novelGene_ZC3H15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-104	True	NA	NA
PB.6888.2	chr2	-	3994	1	intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.11460.6	chr9	-	4342	11	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-56	-4775	any annotated donor/acceptor	FALSE	canonical	1	13483	junction_8	47977.70820547809	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	425	1222	45.0	15	True	TATAAA	-21
PB.11127.10	chr8	-	3517	3	incomplete-splice_match	PCMTD1	ENST00000522514.5	1287	6	-95	22511	-18	1958	3prime_fragment	FALSE	canonical	1	139317	junction_2	104830.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	298	711	20.0	-21	True	AATAAA	-13
PB.11127.11	chr8	-	3464	3	novel_in_catalog	PCMTD1	novel	3697	4	NA	NA	4	1958	no_combination_of_known_junctions	FALSE	canonical	1	8346	junction_1	65485.5	NA	10	NA	TRUE	NA	NA	NA	C	coding	101	306	261	566	20.0	16	True	AATAAA	-13
PB.11127.12	chr8	-	3008	2	full-splice_match	PCMTD1	ENST00000521046.1	856	2	-64	-2088	10	2088	multi-exon	FALSE	canonical	1	139317	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	255	599	75.0	22	True	NA	NA
PB.8443.13	chr3	-	2833	22	incomplete-splice_match	XRN1	ENST00000392981.6	5383	41	-45	71915	-9	-6927	3prime_fragment	FALSE	canonical	1	111624	junction_1	48663.05427768229	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	94	2733	35.0	-1	True	AATAAA	-15
PB.7686.14	chr22	-	3999	22	novel_not_in_catalog	AP1B1	novel	3560	4	NA	NA	-18	6	any annotated donor/acceptor	FALSE	canonical	1	794	junction_16	328772.9916650407	NA	30	6	TRUE	NA	NA	NA	C	coding	710	2133	905	3037	25.0	17	True	AATAAA	-19
PB.7686.15	chr22	-	3854	20	novel_in_catalog	AP1B1	novel	3560	4	NA	NA	9	6	no_combination_of_known_junctions	FALSE	canonical	1	17925	junction_18	261330.03834673256	NA	2	1	TRUE	NA	NA	NA	C	coding	882	2649	244	2892	25.0	-10	True	AATAAA	-19
PB.635.48	chr1	-	2912	19	full-splice_match	CSDE1	ENST00000339438.10	4006	19	-5	1099	-1	-55	multi-exon	FALSE	canonical	1	1441617	junction_1	1263348.642629662	NA	11	1	TRUE	NA	NA	NA	C	coding	767	2304	452	2755	75.0	-6	True	NA	NA
PB.1020.2	chr1	-	3262	22	novel_in_catalog	DENND1B	novel	8378	23	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	38056	junction_21	10536.99253908379	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	179	2446	85.0	-27	True	CATAAA	-11
PB.7686.18	chr22	-	2578	4	novel_in_catalog	AP1B1	novel	4146	21	NA	NA	6	1967	intron_retention	FALSE	canonical	1	45319	junction_2	338766.00180590077	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	1295	1732	90.0	-13	True	NA	NA
PB.7686.19	chr22	-	1708	5	incomplete-splice_match	AP1B1	ENST00000317368.11	3903	21	24	29841	24	1967	3prime_fragment	FALSE	canonical	1	45319	junction_3	360516.79621369584	NA	1	NA	TRUE	NA	NA	NA	C	coding	232	699	164	862	90.0	5	True	NA	NA
PB.11518.8	chr9	-	2450	12	full-splice_match	PIGO	ENST00000361778.6	2464	12	10	4	3	0	multi-exon	FALSE	canonical	1	68117	junction_11	73432.75863025703	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	33	2051	25.0	-1	True	AATAAA	-11
PB.4998.2	chr17	-	3859	10	novel_in_catalog	RETREG3	novel	4149	8	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	5117	junction_8	145715.03529030323	NA	2	NA	TRUE	NA	NA	NA	C	coding	369	1110	448	1557	35.0	-22	True	AATAAA	-21
PB.4998.4	chr17	-	3473	9	full-splice_match	RETREG3	ENST00000309428.9	3759	9	281	5	221	-5	multi-exon	FALSE	canonical	1	196759	junction_8	77899.05903796271	NA	2	NA	TRUE	NA	NA	NA	C	coding	369	1110	71	1180	45.0	260	False	AATAAA	-12
PB.4998.6	chr17	-	3742	8	full-splice_match	RETREG3	ENST00000586870.5	1632	8	-10	-2100	-10	0	multi-exon	FALSE	canonical	1	17521	junction_6	129167.40355927614	NA	2	NA	TRUE	NA	NA	NA	C	coding	265	798	645	1442	35.0	-33	False	AATAAA	-19
PB.7937.5	chr3	+	2312	18	full-splice_match	ATG7	ENST00000354956.9	2296	18	-17	1	-4	-1	multi-exon	FALSE	canonical	1	7737	junction_16	61775.37234088251	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	43	2073	15.0	2	True	NA	NA
PB.11518.2	chr9	-	2839	12	novel_in_catalog	PIGO	novel	2588	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	9566	junction_11	85814.30983483903	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	418	2436	15.0	20	True	AATAAA	-15
PB.8861.1	chr4	+	2362	2	full-splice_match	MRPS18C	ENST00000512375.1	2482	2	120	0	-3	0	multi-exon	FALSE	canonical	1	547722	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	92	279	27	305	100.0	-9	True	NA	NA
PB.11518.4	chr9	-	3818	12	novel_in_catalog	PIGO	novel	2588	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	2167	junction_11	100240.1260741195	NA	1	1	TRUE	NA	NA	NA	C	coding	1089	3270	147	3416	15.0	-17	True	AATAAA	-14
PB.11518.5	chr9	-	3703	11	novel_in_catalog	PIGO	novel	2588	13	NA	NA	4	0	intron_retention	FALSE	canonical	1	68117	junction_10	63554.817474680865	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	32	3301	15.0	0	True	AATAAA	-14
PB.11518.6	chr9	-	2636	12	novel_not_in_catalog	PIGO	novel	2588	13	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	341	junction_5	91718.24828181302	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	36	2234	15.0	-4	True	AATAAA	-14
PB.11518.7	chr9	-	4282	10	novel_in_catalog	PIGO	novel	2588	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	68117	junction_9	63113.97285647922	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	47	2956	25.0	-15	True	AATAAA	-11
PB.11851.3	chr9	+	4648	19	full-splice_match	GPR107	ENST00000372410.7	6991	19	198	2145	-17	1901	multi-exon	FALSE	canonical	1	42578	junction_15	101719.69641030961	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	30	1745	40.0	-3	True	AATAAA	-33
PB.7247.5	chr20	-	3259	1	novel_in_catalog	EIF2S2	novel	2656	9	NA	NA	120	-20656	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1	True	NA	NA
PB.7247.4	chr20	-	1223	9	full-splice_match	EIF2S2	ENST00000374980.2	2656	9	84	1349	84	-1349	multi-exon	FALSE	canonical	1	397	junction_4	327198.48770124896	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	139	1140	70.0	26	False	NA	NA
PB.7247.3	chr20	-	1403	8	novel_in_catalog	EIF2S2	novel	2656	9	NA	NA	53	-1143	no_combination_of_known_junctions	FALSE	canonical	1	390	junction_2	363284.34128840035	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	170	1114	15.0	-5	True	ATTAAA	-16
PB.7247.2	chr20	-	1417	9	full-splice_match	EIF2S2	ENST00000374980.2	2656	9	103	1136	103	-1136	multi-exon	FALSE	canonical	1	397	junction_4	327198.48770124896	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	120	1121	15.0	-16	True	ATTAAA	-23
PB.7247.1	chr20	-	2561	9	full-splice_match	EIF2S2	ENST00000374980.2	2656	9	87	8	87	-8	multi-exon	FALSE	canonical	1	397	junction_4	327198.48770124896	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	136	1137	10.0	29	False	AATAAA	-29
PB.5776.4	chr19	+	2316	12	novel_in_catalog	IL27RA	novel	2962	14	NA	NA	-8	-338	no_combination_of_known_junctions	FALSE	canonical	1	3089	junction_2	60259.493674447906	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	445	1728	75.0	11	True	NA	NA
PB.5776.5	chr19	+	2733	13	incomplete-splice_match	IL27RA	ENST00000263379.3	2962	14	13	338	13	-338	intron_retention	FALSE	canonical	1	92661	junction_1	33886.92354483265	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	113	1849	75.0	-37	True	NA	NA
PB.5776.6	chr19	+	2452	13	novel_in_catalog	IL27RA	novel	2962	14	NA	NA	14	-338	no_combination_of_known_junctions	FALSE	canonical	1	1613	junction_2	58120.677244933424	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	329	1864	75.0	-36	True	NA	NA
PB.5776.7	chr19	+	2564	13	incomplete-splice_match	IL27RA	ENST00000263379.3	2962	14	473	338	473	-338	5prime_fragment	FALSE	canonical	1	131135	junction_1	23999.72741555273	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	441	1976	75.0	-82	False	NA	NA
PB.5776.1	chr19	+	2406	14	full-splice_match	IL27RA	ENST00000263379.3	2962	14	41	515	41	-515	multi-exon	FALSE	canonical	1	92661	junction_1	32850.515303659646	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	85	1995	75.0	-9	True	NA	NA
PB.5776.2	chr19	+	2424	14	full-splice_match	IL27RA	ENST00000263379.3	2962	14	200	338	200	-338	multi-exon	FALSE	canonical	1	92661	junction_1	32850.515303659646	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	220	1836	75.0	-355	False	NA	NA
PB.5776.3	chr19	+	2727	13	novel_in_catalog	IL27RA	novel	2962	14	NA	NA	-16	-338	intron_retention	TRUE	canonical	1	92661	junction_1	33976.689152168066	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	142	2139	75.0	3	True	NA	NA
PB.3702.4	chr14	-	2722	2	full-splice_match	GPR132	ENST00000546679.1	548	2	0	-2174	0	-33	multi-exon	FALSE	canonical	1	2445	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	583	1161	80.0	-2	True	NA	NA
PB.3702.3	chr14	-	2976	4	novel_not_in_catalog	GPR132	novel	3660	4	NA	NA	0	-33	any annotated donor/acceptor	FALSE	canonical	1	3729	junction_3	9802.958748368894	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	300	1415	80.0	-2	True	NA	NA
PB.3702.2	chr14	-	3623	4	full-splice_match	GPR132	ENST00000329797.7	3660	4	-7	44	-7	-33	multi-exon	FALSE	canonical	1	17275	junction_1	10682.48008033091	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	929	2062	80.0	-9	True	NA	NA
PB.3702.1	chr14	-	2836	3	full-splice_match	GPR132	ENST00000392585.2	2887	3	15	36	0	-33	multi-exon	FALSE	canonical	1	26324	junction_1	8549.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	160	1275	80.0	-2	True	NA	NA
PB.640.1	chr1	-	4234	1	genic	AL390066.1	novel	NA	NA	NA	NA	2311	348	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	113	342	1990	2331	95.0	9329	False	GATAAA	-16
PB.640.2	chr1	-	3942	1	novel_in_catalog	AL390066.1	novel	2302	2	NA	NA	2251	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	113	342	2050	2391	20.0	9269	False	CATAAA	-40
PB.11539.7	chr9	-	7229	10	novel_not_in_catalog	PAX5	novel	8615	10	NA	NA	6342	-2343	any annotated donor/acceptor	FALSE	canonical	1	25265	junction_9	30963.312426877786	NA	5	NA	TRUE	NA	NA	NA	B	coding	390	1173	1115	2287	20.0	4	True	AATAAA	-26
PB.7934.4	chr3	+	3115	12	novel_in_catalog	IRAK2	novel	3483	13	NA	NA	54	-167	no_combination_of_known_junctions	FALSE	canonical	1	7502	junction_2	31403.079288660807	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	37	1767	25.0	0	True	AATAAA	-17
PB.7934.2	chr3	+	3480	13	full-splice_match	IRAK2	ENST00000256458.4	3483	13	8	-5	8	5	multi-exon	FALSE	canonical	1	50044	junction_1	21718.94652700852	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	83	1960	30.0	-2	True	AATAAA	-23
PB.7934.3	chr3	+	3315	12	novel_in_catalog	IRAK2	novel	3483	13	NA	NA	24	3	no_combination_of_known_junctions	FALSE	canonical	1	7502	junction_2	31403.079288660807	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	67	1797	35.0	0	True	AATAAA	-21
PB.7934.1	chr3	+	3325	13	full-splice_match	IRAK2	ENST00000256458.4	3483	13	3	155	3	-155	multi-exon	FALSE	canonical	1	50044	junction_1	21718.94652700852	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	88	1965	30.0	-7	True	AATAAA	-29
PB.2374.13	chr11	-	3345	9	novel_not_in_catalog	SNX19	novel	6535	11	NA	NA	3	173	intron_retention	FALSE	canonical	1	28	junction_3	69883.2091582091	NA	0	NA	TRUE	NA	NA	NA	C	coding	879	2640	568	3207	15.0	2	True	ATTAAA	-24
PB.2374.12	chr11	-	4960	11	full-splice_match	SNX19	ENST00000265909.8	6535	11	25	1550	-5	854	multi-exon	FALSE	canonical	1	83269	junction_3	53932.77108994123	NA	0	NA	TRUE	NA	NA	NA	C	coding	992	2979	546	3524	45.0	-6	True	ATTAAA	-12
PB.2374.11	chr11	-	2975	11	full-splice_match	SNX19	ENST00000528555.5	1506	11	-51	-1418	7	865	multi-exon	FALSE	canonical	1	30079	junction_10	65513.306987512085	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	410	1528	25.0	6	False	ATTAAA	-23
PB.2374.10	chr11	-	5225	13	novel_not_in_catalog	SNX19	novel	6535	11	NA	NA	-14	876	intron_retention	FALSE	non_canonical	0	0	junction_4	79761.6185996679	NA	1	NA	TRUE	NA	NA	NA	C	coding	1070	3213	555	3767	10.0	-15	True	ATTAAA	-34
PB.9956.1	chr6	-	2308	14	novel_not_in_catalog	STK38	novel	3576	14	NA	NA	-5	7	any annotated donor/acceptor	FALSE	canonical	1	31598	junction_1	142042.5502930424	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	289	1608	30.0	-17	True	AATAAA	-21
PB.9956.2	chr6	-	4366	13	novel_not_in_catalog	STK38	novel	3576	14	NA	NA	-4	-7	intron_retention	FALSE	canonical	1	131050	junction_12	112959.14367774625	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	288	1736	55.0	-16	True	AATAAA	-7
PB.9956.3	chr6	-	3434	14	novel_not_in_catalog	STK38	novel	3576	14	NA	NA	132	-7	any annotated donor/acceptor	FALSE	canonical	1	131050	junction_13	109560.316095774	NA	3	NA	TRUE	NA	NA	NA	C	coding	465	1398	152	1549	55.0	7	True	AATAAA	-7
PB.7174.2	chr20	-	5641	26	full-splice_match	JAG1	ENST00000254958.10	5940	26	-27	326	-27	-251	multi-exon	FALSE	canonical	1	159054	junction_25	97926.140468547	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	497	4153	40.0	10	False	AATAAA	-9
PB.9956.5	chr6	-	3370	14	full-splice_match	STK38	ENST00000229812.7	3576	14	3	203	3	-203	multi-exon	FALSE	canonical	1	75241	junction_13	119836.04287816843	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	284	1681	15.0	-9	True	AGTAAA	-18
PB.1137.16	chr1	-	4452	2	incomplete-splice_match	DUSP10	ENST00000366899.3	2676	4	75	34033	-12	-33030	3prime_fragment	FALSE	canonical	1	240832	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	165	1133	35.0	1694	False	AATAAA	-26
PB.6765.5	chr2	+	2691	14	full-splice_match	ARHGAP15	ENST00000295095.10	1775	14	107	-1023	8	1023	multi-exon	FALSE	canonical	1	208470	junction_1	41230.115106177414	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	61	1488	45.0	2	True	AATAAA	-20
PB.5697.6	chr19	+	3180	7	full-splice_match	ICAM1	ENST00000264832.7	3252	7	282	-210	-3	210	multi-exon	FALSE	canonical	1	308728	junction_1	80521.66720085691	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	44	1642	30.0	-3	True	ACTAAA	-33
PB.7257.2	chr20	-	1872	11	full-splice_match	EDEM2	ENST00000374492.7	1919	11	39	8	-6	-1	multi-exon	FALSE	canonical	1	223344	junction_10	39943.90607138966	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	68	1804	20.0	2	True	AATAAA	-18
PB.7257.3	chr20	-	1961	12	novel_not_in_catalog	EDEM2	novel	1919	11	NA	NA	1	-1	any annotated donor/acceptor	TRUE	canonical	1	25905	junction_5	106494.32977905871	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	820	1893	20.0	-36	True	AATAAA	-18
PB.7257.4	chr20	-	1817	11	novel_not_in_catalog	EDEM2	novel	1919	11	NA	NA	22	-2	any annotated donor/acceptor	FALSE	canonical	1	24427	junction_1	120246.27105906443	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	85	795	15.0	-15	True	AATAAA	-17
PB.7257.5	chr20	-	2101	10	incomplete-splice_match	EDEM2	ENST00000374492.7	1919	11	24	10	-21	-3	intron_retention	FALSE	canonical	1	233039	junction_5	36041.197188293176	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	422	2035	20.0	-13	True	AATAAA	-16
PB.7257.6	chr20	-	1776	10	novel_in_catalog	EDEM2	novel	1919	11	NA	NA	11	-3	no_combination_of_known_junctions	FALSE	canonical	1	24427	junction_1	86704.52131745432	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	96	1298	20.0	-26	True	AATAAA	-16
PB.5697.7	chr19	+	3094	6	novel_in_catalog	ICAM1	novel	3252	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	308728	junction_1	87850.46598760874	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	44	1288	15.0	-3	True	AATAAA	-15
PB.803.1	chr1	+	2054	9	full-splice_match	RUSC1	ENST00000368349.8	1968	9	-86	0	-14	0	multi-exon	FALSE	canonical	1	85241	junction_1	147234.2060349768	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	212	1513	15.0	-6296	False	AATAAA	-13
PB.5290.24	chr17	-	3076	14	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	-16	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242349.31111100016	NA	2	1	TRUE	NA	NA	NA	C	coding	397	1194	91	1284	15.0	-46	True	AATAAA	-15
PB.5290.25	chr17	-	3424	14	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	30	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	267258.6317305047	NA	7	NA	TRUE	NA	NA	NA	C	coding	291	876	142	1017	15.0	29	True	AATAAA	-14
PB.5290.26	chr17	-	3292	13	novel_in_catalog	CYTH1	novel	3315	14	NA	NA	-25	-146	combination_of_known_junctions	FALSE	canonical	1	84130	junction_4	220694.2993931626	NA	2	1	TRUE	NA	NA	NA	C	coding	399	1200	197	1396	75.0	7928	False	TTTAAA	-13
PB.5290.27	chr17	-	3164	13	full-splice_match	CYTH1	ENST00000591455.5	3286	13	-25	147	0	-146	multi-exon	FALSE	canonical	1	84130	junction_4	199175.72865581888	NA	2	1	TRUE	NA	NA	NA	C	coding	397	1194	75	1268	75.0	-30	True	TTTAAA	-13
PB.5290.21	chr17	-	3447	13	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	258272.55562684324	NA	8	1	TRUE	NA	NA	NA	C	coding	215	648	390	1037	5.0	-22	True	AATAAA	-17
PB.5290.22	chr17	-	3377	13	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	13892	-3	any annotated donor/acceptor	FALSE	canonical	1	34	junction_12	244839.80964290147	NA	4	2	TRUE	NA	NA	NA	C	coding	338	1017	322	1338	5.0	NA	False	AATAAA	-17
PB.5290.23	chr17	-	3296	13	full-splice_match	CYTH1	ENST00000591455.5	3286	13	-15	5	2	-4	multi-exon	FALSE	canonical	1	84130	junction_4	199175.72865581888	NA	4	1	TRUE	NA	NA	NA	C	coding	397	1194	65	1258	10.0	-20	True	AATAAA	-16
PB.1522.11	chr10	+	3730	8	novel_in_catalog	FAS	novel	1464	10	NA	NA	18	-2	intron_retention	FALSE	canonical	1	186456	junction_7	51283.841744963385	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	129	812	5.0	-54	True	ATTAAA	-13
PB.1522.10	chr10	+	2292	2	incomplete-splice_match	FAS	ENST00000357339.6	1044	8	13	9246	13	-3793	3prime_fragment	FALSE	canonical	1	284281	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	80	243	87	329	80.0	-12	True	NA	NA
PB.1522.13	chr10	+	5892	5	novel_in_catalog	FAS	novel	1464	10	NA	NA	4	147	intron_retention	FALSE	canonical	1	186456	junction_4	55781.22234397074	NA	8	NA	TRUE	NA	NA	NA	C	coding	148	447	96	542	30.0	-21	True	ATTAAA	-19
PB.1522.12	chr10	+	4644	6	novel_in_catalog	FAS	novel	1464	10	NA	NA	-9	147	intron_retention	FALSE	canonical	1	143328	junction_4	73664.31557925451	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	109	555	30.0	-34	True	ATTAAA	-19
PB.5290.28	chr17	-	3147	14	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	119	-146	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	274620.04294208897	NA	2	1	TRUE	NA	NA	NA	C	coding	338	1017	235	1251	75.0	11	True	TTTAAA	-13
PB.1522.14	chr10	+	2506	9	full-splice_match	FAS	ENST00000313771.9	1044	9	145	-1607	2	-1	multi-exon	FALSE	canonical	1	12334	junction_1	112036.5980438284	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-5	True	ATTAAA	-14
PB.8257.37	chr3	+	2865	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	24937	junction_1	54430.21323937608	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	639	1376	35.0	0	True	AATAAA	-20
PB.8257.36	chr3	+	3226	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	147	1142	40.0	0	True	NA	NA
PB.10819.3	chr7	-	4048	3	novel_not_in_catalog	GCC1	novel	4149	2	NA	NA	11	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	87387.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	415	2742	20.0	-1	True	ATTAAA	-14
PB.10658.1	chr7	+	4847	15	full-splice_match	CDK14	ENST00000380050.7	4995	15	147	1	147	0	multi-exon	FALSE	canonical	1	124162	junction_2	30374.609292859685	NA	3	NA	TRUE	NA	NA	NA	C	coding	454	1365	30	1394	25.0	4	True	AATAAA	-19
PB.10658.2	chr7	+	4885	14	full-splice_match	CDK14	ENST00000406263.5	5163	14	282	-4	-3	0	multi-exon	FALSE	canonical	1	51844	junction_1	44417.70161138316	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	161	1432	25.0	1	True	AATAAA	-19
PB.10658.3	chr7	+	4834	14	novel_not_in_catalog	CDK14	novel	759	8	NA	NA	-253	1	any annotated donor/acceptor	FALSE	canonical	1	6111	junction_1	55523.15472520499	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	108	1379	20.0	-10	True	AATAAA	-21
PB.10658.4	chr7	+	4416	14	novel_not_in_catalog	CDK14	novel	759	8	NA	NA	-227	-386	any annotated donor/acceptor	FALSE	canonical	1	6111	junction_1	55523.15472520499	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	82	1353	70.0	-3097	False	NA	NA
PB.9959.9	chr6	+	2215	4	novel_not_in_catalog	CDKN1A	novel	2102	3	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	626	junction_1	861045.4810298932	NA	5	NA	TRUE	NA	NA	NA	C	coding	164	495	185	679	30.0	0	True	NA	NA
PB.10819.4	chr7	-	2193	1	incomplete-splice_match	GCC1	ENST00000321407.2	4149	2	2784	13	2784	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	15	48	763	810	15.0	6182	False	ATTAAA	-12
PB.9959.8	chr6	+	2220	3	novel_not_in_catalog	CDKN1A	novel	2102	3	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	1793	junction_2	1180651.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	91	684	30.0	0	True	NA	NA
PB.6390.5	chr2	-	1290	4	novel_in_catalog	TRMT61B	novel	685	3	NA	NA	15	-4	no_combination_of_known_junctions	FALSE	canonical	1	7071	junction_2	107118.5227130314	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	4	810	25.0	28	True	AATAAA	-16
PB.6390.4	chr2	-	1810	7	novel_in_catalog	TRMT61B	novel	685	3	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	1	32848	junction_2	62192.13904974915	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	35	1435	30.0	3	True	AATAAA	-17
PB.6390.6	chr2	-	3607	5	novel_in_catalog	TRMT61B	novel	685	3	NA	NA	-4	-8	intron_retention	FALSE	canonical	1	129129	junction_4	38710.89978529949	NA	4	NA	TRUE	NA	NA	NA	C	coding	360	1083	35	1117	40.0	3	True	AATAAA	-12
PB.6390.1	chr2	-	1550	5	novel_in_catalog	TRMT61B	novel	685	3	NA	NA	-11	-3	no_combination_of_known_junctions	FALSE	canonical	1	14128	junction_4	80340.74648022633	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	42	1175	30.0	-4	True	AATAAA	-17
PB.6390.3	chr2	-	1841	7	full-splice_match	TRMT61B	ENST00000306108.9	1836	7	-8	3	-8	-3	multi-exon	FALSE	canonical	1	129129	junction_6	35381.64603018853	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	39	1466	30.0	-1	True	AATAAA	-17
PB.6390.2	chr2	-	1909	6	novel_in_catalog	TRMT61B	novel	685	3	NA	NA	3	-3	intron_retention	FALSE	canonical	1	129129	junction_5	19033.64678247445	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	22	1413	30.0	16	True	AATAAA	-17
PB.4453.7	chr16	-	2656	9	novel_in_catalog	DOK4	novel	2851	7	NA	NA	-2	-10	combination_of_known_junctions	FALSE	canonical	1	9502	junction_8	90503.95342055506	NA	2	1	TRUE	NA	NA	NA	C	coding	326	981	267	1247	50.0	5	True	AATAAA	-8
PB.4453.5	chr16	-	2911	8	novel_in_catalog	DOK4	novel	2851	7	NA	NA	1	-10	intron_retention	FALSE	canonical	1	1362	junction_7	98992.1271652139	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	405	1502	50.0	-849	False	AATAAA	-8
PB.4453.4	chr16	-	2757	9	full-splice_match	DOK4	ENST00000340099.8	2772	9	5	10	5	-10	multi-exon	FALSE	canonical	1	27809	junction_8	85480.34831313204	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	368	1348	50.0	-18	True	AATAAA	-8
PB.4453.3	chr16	-	2754	9	novel_in_catalog	DOK4	novel	2851	7	NA	NA	44	-10	combination_of_known_junctions	FALSE	canonical	1	2535	junction_8	92448.21710346488	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	365	1345	50.0	-806	False	AATAAA	-8
PB.1261.8	chr10	+	3893	14	full-splice_match	ZMYND11	ENST00000381607.8	3898	14	5	0	5	0	multi-exon	FALSE	canonical	1	112905	junction_3	175189.88060819838	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	91	1737	55.0	-14	True	AATAAA	-8
PB.4453.1	chr16	-	2916	8	novel_in_catalog	DOK4	novel	2851	7	NA	NA	8	-1	intron_retention	TRUE	canonical	1	27809	junction_7	91075.21275140831	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	365	1462	10.0	-15	True	AATAAA	-18
PB.1261.5	chr10	+	4231	15	full-splice_match	ZMYND11	ENST00000381591.5	4229	15	-13	11	-13	0	multi-exon	FALSE	canonical	1	36456	junction_1	161956.7077382353	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	267	2075	55.0	1	True	AATAAA	-8
PB.1261.4	chr10	+	4202	14	novel_in_catalog	ZMYND11	novel	762	5	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	1	36456	junction_1	187086.06451618424	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	400	2046	55.0	-64	True	AATAAA	-8
PB.1261.7	chr10	+	4222	15	novel_not_in_catalog	ZMYND11	novel	762	5	NA	NA	-104	-1	any annotated donor/acceptor	FALSE	canonical	1	7601	junction_1	167188.36729320724	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	259	2067	50.0	-22	True	AATAAA	-7
PB.1261.6	chr10	+	4075	15	full-splice_match	ZMYND11	ENST00000381591.5	4229	15	-125	279	-125	-268	multi-exon	FALSE	canonical	1	36456	junction_1	161956.7077382353	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	379	2187	85.0	-43	True	NA	NA
PB.1261.1	chr10	+	4148	15	novel_in_catalog	ZMYND11	novel	762	5	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	17304	junction_1	165410.33909206226	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	184	1992	55.0	-790	False	AATAAA	-8
PB.1261.3	chr10	+	3923	14	novel_in_catalog	ZMYND11	novel	762	5	NA	NA	88	-1	combination_of_known_junctions	FALSE	canonical	1	17304	junction_1	190229.80893934733	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	122	1768	50.0	-9	True	AATAAA	-7
PB.1261.2	chr10	+	3850	15	novel_in_catalog	ZMYND11	novel	762	5	NA	NA	56	-268	combination_of_known_junctions	FALSE	canonical	1	17304	junction_1	165410.33909206226	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	154	1962	85.0	-760	False	NA	NA
PB.7857.7	chr22	-	2426	11	novel_not_in_catalog	KIAA0930	novel	8119	10	NA	NA	-172	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_10	303970.86530917726	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	76	1290	5.0	-51	False	AATAAA	-13
PB.7857.4	chr22	-	2853	10	full-splice_match	KIAA0930	ENST00000251993.11	2723	10	-131	1	-131	-1	multi-exon	FALSE	canonical	1	34761	junction_9	267444.2312304463	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	103	1506	15.0	915	False	ATTAAA	-19
PB.7857.5	chr22	-	2559	10	full-splice_match	KIAA0930	ENST00000251993.11	2723	10	-42	206	-42	4	multi-exon	FALSE	canonical	1	34761	junction_9	267444.2312304463	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	14	1417	5.0	1004	False	AATAAA	-19
PB.1673.4	chr10	+	1938	10	novel_in_catalog	FAM45A	novel	992	2	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	78	junction_4	43738.04537397394	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	672	1412	100.0	-29	True	NA	NA
PB.5697.8	chr19	+	3380	4	novel_in_catalog	ICAM1	novel	3252	7	NA	NA	0	-1	intron_retention	FALSE	canonical	1	308728	junction_1	63167.57161708846	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	41	688	15.0	0	True	AATAAA	-15
PB.5697.9	chr19	+	3213	6	novel_in_catalog	ICAM1	novel	3252	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	308728	junction_1	83401.08382413264	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	860	1885	15.0	0	True	AATAAA	-16
PB.8711.2	chr4	-	2566	3	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	-19	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	22019.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	915	1409	30.0	-2	True	AATAAA	-22
PB.2537.8	chr12	+	4107	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	64	268	-23	-265	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	101	2233	90.0	0	True	NA	NA
PB.2537.9	chr12	+	3374	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	64	1001	-23	123	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	101	2233	50.0	0	True	NA	NA
PB.2537.6	chr12	+	2533	20	full-splice_match	DNM1L	ENST00000549701.5	2487	20	-32	-14	-29	14	multi-exon	FALSE	canonical	1	115225	junction_15	179834.86808074158	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	107	2317	45.0	4	True	AATAAA	-29
PB.2537.7	chr12	+	5326	17	novel_in_catalog	DNM1L	novel	4439	19	NA	NA	-29	16	intron_retention	FALSE	canonical	1	365848	junction_4	144040.29261968625	NA	3	NA	TRUE	NA	NA	NA	C	coding	537	1614	107	1720	40.0	4	True	AATAAA	-31
PB.2537.4	chr12	+	2434	18	full-splice_match	DNM1L	ENST00000266481.10	3101	18	-48	715	-32	-21	multi-exon	FALSE	canonical	1	135081	junction_14	169899.50759445233	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	110	2209	25.0	1	True	AATAAA	-38
PB.2537.5	chr12	+	3543	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	57	839	-30	285	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	108	2240	90.0	3	True	NA	NA
PB.2537.2	chr12	+	4424	19	full-splice_match	DNM1L	ENST00000547312.5	2393	19	-66	-1965	-33	-3	multi-exon	FALSE	canonical	1	68434	junction_15	184412.60686539	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	111	2288	50.0	0	True	AATAAA	-20
PB.2537.3	chr12	+	2510	19	full-splice_match	DNM1L	ENST00000547312.5	2393	19	-55	-62	-22	-13	multi-exon	FALSE	canonical	1	68434	junction_15	184412.60686539	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	100	2277	15.0	1	True	TATAAA	-13
PB.2537.1	chr12	+	4461	20	full-splice_match	DNM1L	ENST00000549701.5	2487	20	-38	-1936	-35	-1	multi-exon	FALSE	canonical	1	115225	junction_15	179834.86808074158	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	113	2323	50.0	-2	True	AATAAA	-22
PB.474.19	chr1	-	2107	10	full-splice_match	ZRANB2	ENST00000370920.7	3078	10	262	709	-24	-663	multi-exon	FALSE	canonical	1	308497	junction_1	299404.42773975944	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	41	1033	10.0	-1	True	ATTAAA	-14
PB.11185.31	chr8	-	1855	13	incomplete-splice_match	STAU2	ENST00000524300.5	3065	15	35	131632	1	63	3prime_fragment	FALSE	canonical	1	14708	junction_10	95368.46945615581	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	317	1852	80.0	568	False	AAAACA	-44
PB.8257.39	chr3	+	1845	6	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-4	-169	combination_of_known_junctions	FALSE	canonical	1	3524	junction_5	58736.52574539969	NA	5	NA	TRUE	NA	NA	NA	C	coding	146	441	147	587	85.0	0	True	NA	NA
PB.8257.38	chr3	+	1736	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	2	-63	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	56773.51143702492	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	461	1198	25.0	-2	True	ATTAAA	-36
PB.10242.9	chr6	-	3146	20	novel_not_in_catalog	REPS1	novel	4537	20	NA	NA	-42	2	any annotated donor/acceptor	FALSE	canonical	1	20681	junction_15	146053.42226393844	NA	1	NA	TRUE	NA	NA	NA	C	coding	774	2325	622	2946	15.0	12	True	AATAAA	-22
PB.4864.1	chr17	-	1911	5	full-splice_match	DHRS13	ENST00000378895.8	1921	5	7	3	7	0	multi-exon	FALSE	canonical	1	77695	junction_4	63841.54994594038	NA	0	NA	TRUE	NA	NA	NA	A	coding	377	1134	121	1254	15.0	14	True	AATAAA	-15
PB.10986.15	chr8	-	2741	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-127	intron_retention	FALSE	canonical	1	283	junction_1	1825018.6938563013	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	138	1157	90.0	-26	False	NA	NA
PB.8711.3	chr4	-	4507	3	novel_in_catalog	DCAF16	novel	4548	3	NA	NA	23	-3	no_combination_of_known_junctions	FALSE	canonical	1	61573	junction_1	20855.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	216	651	1024	1674	30.0	-7	True	AATAAA	-21
PB.11691.1	chr9	+	2413	10	full-splice_match	TMEFF1	ENST00000374879.4	2611	10	198	0	198	0	multi-exon	FALSE	canonical	1	108162	junction_1	45218.039482784596	NA	0	NA	TRUE	NA	NA	NA	A	coding	380	1143	235	1377	0.0	-10	True	AATATA	-15
PB.10986.10	chr8	-	2562	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	-2	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	117	1136	30.0	-5	True	AATAAA	-16
PB.10986.11	chr8	-	2515	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2266947.3924711696	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	228	1247	30.0	-28	False	AATAAA	-16
PB.10986.12	chr8	-	2402	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	115	1134	30.0	-3	True	AATAAA	-16
PB.5824.1	chr19	+	3293	7	full-splice_match	MAP1S	ENST00000324096.8	3419	7	125	1	-3	-1	multi-exon	TRUE	canonical	1	235887	junction_1	86261.29328077698	NA	0	NA	TRUE	NA	NA	NA	A	coding	1059	3180	27	3206	0.0	-3	True	AATAAA	-18
PB.7406.12	chr20	-	2761	6	full-splice_match	DIDO1	ENST00000354665.8	2707	6	-122	68	-88	-67	multi-exon	FALSE	canonical	1	126511	junction_5	161592.90498607914	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	360	2048	25.0	-87	False	AATGAA	-36
PB.7406.13	chr20	-	3814	5	novel_in_catalog	DIDO1	novel	8574	16	NA	NA	-30	-2	intron_retention	FALSE	canonical	1	126511	junction_4	164069.70690380354	NA	6	NA	TRUE	NA	NA	NA	C	coding	473	1422	302	1723	15.0	-29	False	TATAAA	-14
PB.7406.10	chr20	-	2359	8	novel_in_catalog	DIDO1	novel	8574	16	NA	NA	-2	8637	combination_of_known_junctions	FALSE	canonical	1	126511	junction_7	175672.83343110935	NA	2	NA	TRUE	NA	NA	NA	C	coding	695	2085	274	2358	60.0	-1	True	NA	NA
PB.7406.11	chr20	-	2755	6	full-splice_match	DIDO1	ENST00000370371.8	2833	6	1	77	1	-69	multi-exon	FALSE	canonical	1	128548	junction_5	160849.4126584241	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	356	2044	20.0	-2	True	AATGAA	-34
PB.10986.18	chr8	-	3412	11	full-splice_match	CTSB	ENST00000533455.5	2009	11	-8	-1395	0	-436	multi-exon	FALSE	canonical	1	244599	junction_9	2028350.7039420477	NA	4	NA	TRUE	NA	NA	NA	C	coding	339	1020	228	1247	100.0	-28	False	NA	NA
PB.10986.19	chr8	-	2547	12	full-splice_match	CTSB	ENST00000531089.5	1436	12	23	-1134	0	-436	multi-exon	FALSE	canonical	1	66392	junction_1	2257048.1944873147	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	203	1222	100.0	-3	True	NA	NA
PB.7406.14	chr20	-	2109	6	full-splice_match	DIDO1	ENST00000354665.8	2707	6	-36	634	-2	-633	multi-exon	FALSE	canonical	1	126511	junction_5	161592.90498607914	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	274	1962	30.0	-1	True	NA	NA
PB.2372.11	chr11	+	3543	16	novel_in_catalog	APLP2	novel	3742	19	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	83402	junction_12	1228256.0608738554	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	85	2187	20.0	0	True	AATAAA	-14
PB.4443.1	chr16	-	3754	4	antisense	novelGene_AC012181.2_AS_novelGene_HERPUD1_AS_novelGene_CETP_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	21	junction_2	144.96206400296597	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	-85	False	AATAAA	-8
PB.5210.44	chr17	+	2575	2	incomplete-splice_match	PRKAR1A	ENST00000585907.1	564	4	2334	-2448	2334	5	5prime_fragment	FALSE	canonical	1	2296625	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1734	False	AATAAA	-26
PB.2372.12	chr11	+	2700	17	full-splice_match	APLP2	ENST00000338167.9	3270	17	-27	597	0	2	multi-exon	FALSE	canonical	1	1485264	junction_6	899222.6006707452	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	85	2340	15.0	0	True	AATAAA	-30
PB.2372.15	chr11	+	2346	15	incomplete-splice_match	APLP2	ENST00000528499.5	2530	16	39533	-3	0	3	5prime_fragment	FALSE	canonical	1	2196834	junction_5	575359.5436154577	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	57	1985	15.0	-1188	False	AATAAA	-31
PB.2372.14	chr11	+	2533	16	novel_in_catalog	APLP2	novel	3742	19	NA	NA	4	-8	no_combination_of_known_junctions	FALSE	canonical	1	83402	junction_12	1228256.0608738554	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	81	2183	40.0	4	True	AATAAA	-20
PB.8461.23	chr3	-	3768	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	73	-1738	-3	-1272	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	268	1470	65.0	-4	True	ACTAAA	-38
PB.8461.22	chr3	-	4130	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	29	-2056	29	-954	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	312	1514	40.0	-48	False	AATAAA	-12
PB.8461.21	chr3	-	4406	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	74	-2377	-2	-633	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	267	1469	50.0	-3	True	NA	NA
PB.8461.27	chr3	-	3650	8	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	18	-1239	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	179268.74512864757	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	510	1319	80.0	17	True	AAAAAG	-18
PB.8461.26	chr3	-	3723	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-3	-1239	any annotated donor/acceptor	FALSE	canonical	1	2385	junction_1	166005.1862108196	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	268	1392	80.0	-4	True	AAAAAG	-18
PB.2692.1	chr12	-	2648	1	novel_in_catalog	NEMP1	novel	458	3	NA	NA	215	-14527	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	6227	False	NA	NA
PB.9354.2	chr5	-	3599	13	novel_not_in_catalog	ELL2	novel	6046	12	NA	NA	-25	-2299	any annotated donor/acceptor	FALSE	canonical	1	26720	junction_2	116336.39541564608	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	614	2125	60.0	-1	True	AATAAA	-23
PB.1673.7	chr10	+	1842	10	novel_in_catalog	FAM45A	novel	992	2	NA	NA	1	-2	intron_retention	FALSE	canonical	1	78	junction_4	12204.406063304545	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	268	1317	95.0	-8	True	NA	NA
PB.4460.1	chr16	+	2239	6	novel_not_in_catalog	USB1	novel	1135	7	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	176295.1838849831	NA	13	2	TRUE	NA	NA	NA	C	coding	252	759	109	867	15.0	-257	False	AATAAA	-21
PB.4460.3	chr16	+	2181	8	novel_not_in_catalog	USB1	novel	1135	7	NA	NA	1	-7	intron_retention	TRUE	non_canonical	0	0	junction_7	155540.3124280136	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	79	876	15.0	-1	True	AATAAA	-14
PB.4460.2	chr16	+	3090	4	full-splice_match	USB1	ENST00000423271.7	1217	4	-12	-1861	-10	11	multi-exon	FALSE	canonical	1	20228	junction_3	179196.59788871242	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	90	650	10.0	-238	False	AATAAA	-38
PB.4460.5	chr16	+	2157	8	novel_not_in_catalog	USB1	novel	1135	7	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_7	155540.3124280136	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	78	875	15.0	0	True	AATAAA	-21
PB.4460.4	chr16	+	2108	8	novel_not_in_catalog	USB1	novel	1135	7	NA	NA	1	-1	intron_retention	TRUE	non_canonical	0	0	junction_7	155540.3124280136	NA	3	1	TRUE	NA	NA	NA	C	coding	265	798	79	876	15.0	-1	True	AATAAA	-20
PB.4460.7	chr16	+	2114	8	novel_not_in_catalog	USB1	novel	1135	7	NA	NA	0	-1	intron_retention	TRUE	non_canonical	0	0	junction_7	155540.3124280136	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	69	866	15.0	9	True	AATAAA	-20
PB.4460.6	chr16	+	2238	7	full-splice_match	USB1	ENST00000219281.7	2282	7	43	1	0	0	multi-exon	FALSE	canonical	1	354370	junction_1	41916.83639230051	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	69	866	15.0	9	True	AATAAA	-21
PB.10066.25	chr6	-	1561	6	incomplete-splice_match	TMEM30A	ENST00000230461.10	4594	7	185	5332	165	1186	3prime_fragment	FALSE	canonical	1	945065	junction_2	63863.900513513894	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	146	1078	30.0	-4	True	GATAAA	-18
PB.1191.5	chr1	+	4662	17	novel_in_catalog	COG2	novel	7836	10	NA	NA	-1	114	intron_retention	FALSE	canonical	1	186298	junction_13	37505.6987053301	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	2922	4316	20.0	-17	True	ATTAAA	-24
PB.10066.20	chr6	-	2721	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	192	1681	172	-6	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	139	1224	75.0	3	True	AATATA	-11
PB.10066.21	chr6	-	2488	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	190	1916	170	-241	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	141	1226	35.0	1	True	AATAAA	-23
PB.10066.22	chr6	-	2411	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	184	1999	164	-324	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	147	1232	25.0	-5	True	ATTAAA	-45
PB.10066.23	chr6	-	2132	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	190	2272	170	-597	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	141	1226	30.0	1	True	NA	NA
PB.8827.6	chr4	-	4541	12	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-13	-1	no_combination_of_known_junctions	FALSE	canonical	1	1364	junction_11	534311.8720771095	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	545	1894	30.0	-4	True	AATAAA	-22
PB.8827.7	chr4	-	4327	12	full-splice_match	G3BP2	ENST00000359707.8	4883	12	555	1	-13	-1	multi-exon	FALSE	canonical	1	173938	junction_4	492708.8761422128	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	232	1680	30.0	-4	True	AATAAA	-22
PB.9845.18	chr6	+	1774	7	novel_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-912	intron_retention	FALSE	canonical	1	4259547	junction_1	1007217.9273618688	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	28	1227	80.0	0	True	NA	NA
PB.8539.1	chr3	+	2330	12	full-splice_match	TTC14	ENST00000296015.8	2881	12	82	469	1	341	multi-exon	FALSE	canonical	1	100836	junction_11	68854.07274989573	NA	1	NA	TRUE	NA	NA	NA	C	coding	760	2280	51	2330	75.0	13	True	AATATA	-22
PB.8827.2	chr4	-	4390	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-11	-1770	-11	163	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	230	1579	35.0	-2	True	AGTAAA	-19
PB.8827.3	chr4	-	4223	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-13	-1601	-13	-6	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	126	6	TRUE	NA	NA	NA	C	coding	449	1350	232	1581	25.0	-4	True	AATAAA	-17
PB.2948.21	chr12	-	2571	11	full-splice_match	PXN	ENST00000424649.6	3683	11	41	1071	7	796	multi-exon	FALSE	canonical	1	355437	junction_10	240586.86956274236	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	102	1775	5.0	-1	True	TTTAAA	-6
PB.8827.1	chr4	-	5312	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	15	-2718	1	1111	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	204	1553	25.0	24	True	AATAAA	-20
PB.8539.8	chr3	+	2387	10	full-splice_match	TTC14	ENST00000412756.6	4568	10	2	2179	0	-1208	multi-exon	FALSE	canonical	1	207959	junction_5	39408.440494986775	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	68	1387	65.0	-4	True	NA	NA
PB.8539.9	chr3	+	2715	11	novel_in_catalog	TTC14	novel	2881	12	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	935	junction_10	89004.28788007912	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	77	1420	20.0	-13	True	ATTAAA	-23
PB.8827.8	chr4	-	4323	12	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	30987	junction_10	521837.700542171	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	327	1676	30.0	-84	True	AATAAA	-22
PB.8827.9	chr4	-	4249	12	full-splice_match	G3BP2	ENST00000395719.7	4217	12	-33	1	-1	-1	multi-exon	FALSE	canonical	1	69621	junction_11	546345.7337247841	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	154	1602	30.0	9	True	AATAAA	-22
PB.3528.9	chr14	+	2387	7	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-15	27	intron_retention	FALSE	canonical	1	2160182	junction_1	1080825.7716390842	NA	92	4	TRUE	NA	NA	NA	C	coding	145	438	1730	2167	25.0	0	True	ATTAAA	-27
PB.2332.20	chr11	+	3890	28	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	4535	0	any annotated donor/acceptor	FALSE	canonical	1	18	junction_1	118933.15886174898	NA	2	NA	TRUE	NA	NA	NA	C	coding	1254	3765	11	3775	90.0	NA	False	TTTAAA	-42
PB.3528.8	chr14	+	2788	6	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	16	16	intron_retention	FALSE	canonical	1	544887	junction_1	1753117.9602213195	NA	2	1	TRUE	NA	NA	NA	C	coding	145	438	2142	2579	10.0	-2	True	ATTAAA	-16
PB.4856.2	chr17	+	5473	37	full-splice_match	SUPT6H	ENST00000314616.10	6523	37	98	952	-9	-3	multi-exon	TRUE	canonical	1	183395	junction_1	166029.9108039974	NA	0	NA	TRUE	NA	NA	NA	C	coding	1726	5181	186	5366	10.0	-16	True	CATAAA	-14
PB.4856.3	chr17	+	6078	38	full-splice_match	SUPT6H	ENST00000347486.8	5569	38	-7	-502	-7	-447	multi-exon	FALSE	canonical	1	9395	junction_1	203466.90563310505	NA	0	NA	TRUE	NA	NA	NA	C	coding	1726	5181	286	5466	25.0	-14	True	AATAAA	-22
PB.4856.1	chr17	+	5928	37	full-splice_match	SUPT6H	ENST00000314616.10	6523	37	151	444	44	-444	multi-exon	FALSE	canonical	1	183395	junction_1	166029.9108039974	NA	2	NA	TRUE	NA	NA	NA	C	coding	1726	5181	133	5313	25.0	-19	True	AATAAA	-25
PB.8711.6	chr4	-	2670	4	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	-17	-132	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	42424.22855711895	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	1017	1643	15.0	0	True	ATTAAA	-25
PB.3576.2	chr14	-	1215	5	full-splice_match	ERG28	ENST00000256319.6	2633	5	314	1104	314	-1104	multi-exon	FALSE	canonical	1	481923	junction_4	163751.4180814551	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	133	555	20.0	0	True	AATAAA	-20
PB.4856.4	chr17	+	6377	37	full-splice_match	SUPT6H	ENST00000314616.10	6523	37	141	5	34	-5	multi-exon	FALSE	canonical	1	183395	junction_1	166029.9108039974	NA	2	NA	TRUE	NA	NA	NA	C	coding	1726	5181	143	5323	10.0	-65	False	AGTAAA	-15
PB.5990.2	chr19	+	5363	18	novel_not_in_catalog	PLEKHG2	novel	8132	19	NA	NA	14	-7	intron_retention	FALSE	non_canonical	0	0	junction_15	63531.25378549595	NA	3	1	TRUE	NA	NA	NA	B	coding	783	2352	2648	4999	20.0	-1180	False	NA	NA
PB.5990.3	chr19	+	5211	18	novel_not_in_catalog	PLEKHG2	novel	8132	19	NA	NA	19	0	intron_retention	FALSE	non_canonical	0	0	junction_15	64737.08692052042	NA	2	1	TRUE	NA	NA	NA	B	coding	783	2352	2640	4991	25.0	-1175	False	NA	NA
PB.3677.9	chr14	+	2265	14	novel_not_in_catalog	TRAF3	novel	7640	11	NA	NA	-10	-262	any annotated donor/acceptor	FALSE	canonical	1	21	junction_2	114626.3757804294	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1662	602	2263	15.0	-1834	False	ATTAAA	-33
PB.3677.6	chr14	+	1859	11	full-splice_match	TRAF3	ENST00000347662.8	7700	11	100	5741	22	-263	multi-exon	FALSE	canonical	1	14507	junction_7	96299.59038069686	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1587	272	1858	20.0	-26	True	ATTAAA	-32
PB.3677.7	chr14	+	1777	11	full-splice_match	TRAF3	ENST00000560371.5	7640	11	108	5755	-18	-276	multi-exon	FALSE	canonical	1	15270	junction_1	82691.27859871318	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1650	128	1777	35.0	-21	True	ATTAAA	-19
PB.3677.4	chr14	+	2550	12	novel_not_in_catalog	TRAF3	novel	7640	11	NA	NA	-15	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	88975.53168769173	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	390	2087	35.0	-1839	False	NA	NA
PB.3677.5	chr14	+	7689	12	full-splice_match	TRAF3	ENST00000392745.6	2459	12	8	-5238	8	0	multi-exon	FALSE	canonical	1	85903	junction_1	64237.87024839465	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	286	1974	20.0	-40	True	AATAAA	-18
PB.3677.2	chr14	+	2436	12	full-splice_match	TRAF3	ENST00000392745.6	2459	12	53	-30	8	30	multi-exon	FALSE	canonical	1	85903	junction_1	64237.87024839465	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	241	1929	20.0	5	True	AATACA	-26
PB.3677.3	chr14	+	2323	11	full-splice_match	TRAF3	ENST00000560371.5	7640	11	108	5209	-18	30	multi-exon	FALSE	canonical	1	15270	junction_1	82691.27859871318	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	128	1816	20.0	-21	True	AATACA	-26
PB.3677.1	chr14	+	2605	12	novel_not_in_catalog	TRAF3	novel	7640	11	NA	NA	-66	22	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	107795.53949878777	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	418	2106	15.0	-1890	False	AATACA	-18
PB.3527.1	chr14	+	6281	5	novel_in_catalog	SUSD6	novel	5388	6	NA	NA	72	-4	intron_retention	FALSE	canonical	1	111069	junction_1	48856.64320233227	NA	7	NA	TRUE	NA	NA	NA	C	coding	138	417	1706	2122	25.0	12	True	ATTAAA	-16
PB.1191.3	chr1	+	2832	19	novel_not_in_catalog	COG2	novel	7836	10	NA	NA	-5	114	any annotated donor/acceptor	FALSE	canonical	1	4311	junction_7	82110.03429582603	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	1092	2486	20.0	-21	True	ATTAAA	-24
PB.3527.6	chr14	+	5354	6	full-splice_match	SUSD6	ENST00000342745.4	5388	6	34	0	-8	0	multi-exon	FALSE	canonical	1	111069	junction_1	43699.75092102929	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	280	1191	25.0	-114	False	ATTAAA	-20
PB.8711.7	chr4	-	2486	4	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	-17	-136	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	65749.87443503008	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	1032	1682	20.0	0	True	ATTAAA	-21
PB.11500.1	chr9	-	3826	6	full-splice_match	B4GALT1	ENST00000379731.4	4201	6	347	28	347	-28	multi-exon	FALSE	canonical	1	481996	junction_5	211766.26480400507	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	261	1037	35.0	5213	False	ATTAAA	-13
PB.6991.21	chr2	-	1987	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	73	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	214	858	75.0	9	True	NA	NA
PB.6991.20	chr2	-	2030	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	241	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	46	690	75.0	227	False	NA	NA
PB.6991.23	chr2	-	1637	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	4	-26	any annotated donor/acceptor	FALSE	canonical	1	14883	junction_1	90644.38573987912	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	283	927	75.0	-10	True	NA	NA
PB.6991.22	chr2	-	1929	6	novel_not_in_catalog	MREG	novel	2618	6	NA	NA	-4	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95898.4159214322	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	291	935	75.0	-18	True	NA	NA
PB.3527.5	chr14	+	5336	6	novel_not_in_catalog	SUSD6	novel	5388	6	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	2538	junction_3	86672.02483016074	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	317	1174	25.0	-3	True	ATTAAA	-19
PB.2332.22	chr11	+	3300	24	incomplete-splice_match	SORL1	ENST00000534286.5	3501	25	443	0	443	0	5prime_fragment	FALSE	canonical	1	296755	junction_3	85066.17706946522	NA	0	NA	TRUE	NA	NA	NA	C	coding	1060	3183	3	3185	90.0	480	False	TTTAAA	-42
PB.8711.4	chr4	-	2614	4	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	21	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	42424.22855711895	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	1026	1676	30.0	-9	True	AATAAA	-21
PB.8179.2	chr3	+	2626	19	full-splice_match	PRKCD	ENST00000330452.7	2680	19	137	-83	95	-80	multi-exon	FALSE	canonical	1	34744	junction_1	209235.09607330593	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	225	2255	80.0	-7405	False	NA	NA
PB.926.1	chr1	-	4894	13	full-splice_match	SCYL3	ENST00000367771.10	6364	13	27	1443	27	-1443	multi-exon	FALSE	canonical	1	64921	junction_11	21373.644613297834	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	189	2255	100.0	-30	True	AATAAA	-12
PB.5066.1	chr17	+	2938	14	incomplete-splice_match	ITGB3	ENST00000559488.5	3995	15	-43	3601	-43	-3601	3prime_fragment	FALSE	canonical	1	54445	junction_1	37080.314325598796	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	60	2402	20.0	-5	True	NA	NA
PB.5066.2	chr17	+	4347	15	full-splice_match	ITGB3	ENST00000559488.5	3995	15	-37	-315	-37	315	multi-exon	FALSE	canonical	1	54445	junction_1	35910.18639975719	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	54	2420	30.0	1	True	AATGAA	-23
PB.5066.3	chr17	+	2603	14	incomplete-splice_match	ITGB3	ENST00000559488.5	3995	15	-37	3930	-37	-3930	3prime_fragment	FALSE	canonical	1	54445	junction_1	37080.314325598796	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	54	2396	0.0	1	True	AATAAA	-16
PB.5066.4	chr17	+	3564	15	novel_not_in_catalog	ITGB3	novel	3995	15	NA	NA	-22	4712	any annotated donor/acceptor	FALSE	canonical	1	2589	junction_14	53341.01267547232	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	180	2618	10.0	-3	True	AAGAAA	-16
PB.5066.5	chr17	+	2648	15	full-splice_match	ITGB3	ENST00000559488.5	3995	15	-22	1369	-22	-1369	multi-exon	FALSE	canonical	1	54445	junction_1	35910.18639975719	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	39	2405	10.0	-3	True	TTTAAA	-24
PB.5066.6	chr17	+	3696	15	full-splice_match	ITGB3	ENST00000559488.5	3995	15	-20	319	-20	-319	multi-exon	FALSE	canonical	1	54445	junction_1	35910.18639975719	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	37	2403	35.0	-1	True	TATAAA	-10
PB.5066.7	chr17	+	1687	9	full-splice_match	ITGB3	ENST00000571680.1	1668	9	-27	8	-20	-8	multi-exon	FALSE	canonical	1	54445	junction_1	39158.934014953724	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	37	1368	30.0	-1	True	AGTAAA	-10
PB.5066.8	chr17	+	5932	15	full-splice_match	ITGB3	ENST00000559488.5	3995	15	-18	-1919	-18	1919	multi-exon	FALSE	canonical	1	54445	junction_1	35910.18639975719	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	35	2401	45.0	1	True	ATTAAA	-11
PB.5066.9	chr17	+	5111	15	novel_not_in_catalog	ITGB3	novel	3995	15	NA	NA	-18	6263	any annotated donor/acceptor	FALSE	canonical	1	2589	junction_14	53341.01267547232	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	176	2614	100.0	1	True	NA	NA
PB.1191.1	chr1	+	2781	1	genic	COG2	novel	NA	NA	NA	NA	-36	-15640	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-93	False	NA	NA
PB.8948.18	chr4	-	2446	18	full-splice_match	CAMK2D	ENST00000296402.9	5820	18	139	3235	139	-162	multi-exon	FALSE	canonical	1	72953	junction_1	80118.03081319512	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	721	2157	75.0	-2	True	AAAACA	-18
PB.8948.19	chr4	-	1790	18	full-splice_match	CAMK2D	ENST00000394524.7	5294	18	269	3235	7	-162	multi-exon	FALSE	canonical	1	209019	junction_1	54651.02282045414	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	109	1545	75.0	7	True	AAAACA	-18
PB.8711.5	chr4	-	2673	4	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	7	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	65749.87443503008	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	1008	1487	30.0	24	True	AATAAA	-19
PB.8948.14	chr4	-	3249	18	full-splice_match	CAMK2D	ENST00000394524.7	5294	18	252	1793	-10	136	multi-exon	FALSE	canonical	1	209019	junction_1	54651.02282045414	NA	2	NA	TRUE	NA	NA	NA	C	coding	478	1437	126	1562	65.0	-10	True	TTTAAA	-16
PB.8948.15	chr4	-	3110	18	full-splice_match	CAMK2D	ENST00000394524.7	5294	18	226	1958	-1	-29	multi-exon	FALSE	canonical	1	209019	junction_1	54651.02282045414	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	152	1588	85.0	-4	True	NA	NA
PB.8948.16	chr4	-	3142	19	full-splice_match	CAMK2D	ENST00000342666.9	1940	19	-87	-1115	-25	-29	multi-exon	FALSE	canonical	1	73116	junction_1	100126.7758440102	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	88	1587	85.0	4	True	NA	NA
PB.8948.17	chr4	-	3128	18	full-splice_match	CAMK2D	ENST00000296402.9	5820	18	734	1958	-10	-29	multi-exon	FALSE	canonical	1	72953	junction_1	80118.03081319512	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	126	1562	85.0	-10	True	NA	NA
PB.8948.10	chr4	-	3546	1	novel_in_catalog	CAMK2D	novel	5294	18	NA	NA	57882	546	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3829	False	AATAAA	-19
PB.8948.12	chr4	-	3331	18	full-splice_match	CAMK2D	ENST00000394524.7	5294	18	308	1655	-7	274	multi-exon	FALSE	canonical	1	209019	junction_1	54651.02282045414	NA	2	NA	TRUE	NA	NA	NA	C	coding	478	1437	70	1506	70.0	5	True	NA	NA
PB.8948.13	chr4	-	3454	18	full-splice_match	CAMK2D	ENST00000296402.9	5820	18	711	1655	2	274	multi-exon	FALSE	canonical	1	72953	junction_1	80118.03081319512	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	149	1585	70.0	-1	True	NA	NA
PB.10986.41	chr8	-	2173	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	2309964.3835996925	NA	16	2	TRUE	NA	NA	NA	C	coding	288	867	502	1368	25.0	-24	False	AATAAA	-17
PB.2033.11	chr11	-	1882	5	full-splice_match	EHD1	ENST00000320631.7	4551	5	97	2572	-81	78	multi-exon	FALSE	canonical	1	715496	junction_2	110818.81347496914	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	159	1763	50.0	-2	True	CATAAA	-28
PB.2033.10	chr11	-	2009	5	full-splice_match	EHD1	ENST00000320631.7	4551	5	95	2447	-83	203	multi-exon	FALSE	canonical	1	715496	junction_2	110818.81347496914	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	161	1765	0.0	-4	True	AATATA	-17
PB.8738.1	chr4	+	3642	13	full-splice_match	FAM114A1	ENST00000515037.5	1431	13	-32	-2179	-32	0	multi-exon	FALSE	canonical	1	6788	junction_1	107357.48166480864	NA	2	NA	TRUE	NA	NA	NA	C	coding	356	1071	390	1460	25.0	-717	False	ATTAAA	-15
PB.5010.7	chr17	-	2386	6	full-splice_match	VAT1	ENST00000355653.7	2734	6	39	309	-23	-307	multi-exon	FALSE	canonical	1	1100939	junction_5	322242.1522491432	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	58	1239	30.0	0	True	NA	NA
PB.5010.5	chr17	-	1671	7	novel_not_in_catalog	VAT1	novel	2734	6	NA	NA	-24	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	636715.99750039	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	59	1240	0.0	-1	True	AATAAA	-14
PB.5010.3	chr17	-	2723	6	full-splice_match	VAT1	ENST00000355653.7	2734	6	3	8	3	-6	multi-exon	FALSE	canonical	1	1100939	junction_5	322242.1522491432	NA	35	NA	TRUE	NA	NA	NA	C	coding	393	1182	94	1275	5.0	-1	True	AATAAA	-8
PB.5010.2	chr17	-	2500	6	full-splice_match	VAT1	ENST00000587173.5	1174	6	-33	-1293	29	-1	multi-exon	FALSE	canonical	1	4740	junction_5	691200.563632467	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	68	1045	5.0	-10	True	AATAAA	-15
PB.5010.1	chr17	-	2873	6	full-splice_match	VAT1	ENST00000355653.7	2734	6	33	-172	-29	172	multi-exon	TRUE	canonical	1	1100939	junction_5	322242.1522491432	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	64	1245	15.0	-6	True	NA	NA
PB.10986.40	chr8	-	2260	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	2301921.847901103	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	436	1455	25.0	-1	True	AATAAA	-17
PB.864.7	chr1	-	2094	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-15	-984	intron_retention	FALSE	non_canonical	0	0	junction_1	349738.2750222737	NA	6	2	TRUE	NA	NA	NA	B	coding	276	831	118	948	30.0	-16	False	AATAAA	-18
PB.1003.1	chr1	+	2333	4	intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	50.38738819276992	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-22
PB.7918.3	chr3	+	4674	13	novel_in_catalog	BRPF1	novel	4304	13	NA	NA	-2	0	intron_retention	FALSE	canonical	1	85081	junction_7	57712.83533167326	NA	1	NA	TRUE	NA	NA	NA	C	coding	1247	3744	407	4150	95.0	8	True	NA	NA
PB.11050.20	chr8	+	3923	29	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	20250	junction_24	196333.04397968866	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	175	3042	0.0	-6	True	ATTAAA	-19
PB.8458.27	chr3	-	2815	7	incomplete-splice_match	HLTF	ENST00000494055.5	3633	26	8	38546	8	14091	3prime_fragment	FALSE	canonical	1	229929	junction_2	31065.910112837333	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	211	1128	55.0	-37	True	NA	NA
PB.11050.22	chr8	+	3032	2	incomplete-splice_match	PTK2B	ENST00000412793.5	818	7	10	29941	7	2658	3prime_fragment	FALSE	canonical	1	53763	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	AAAAAG	-10
PB.11050.23	chr8	+	3005	3	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	3	9061	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_2	23145.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	487	921	20.0	-5	True	AATAAA	-19
PB.11050.24	chr8	+	4336	29	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	3	1	intron_retention	FALSE	canonical	1	53763	junction_1	165859.06723617518	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	1317	3458	0.0	-5	True	ATTAAA	-16
PB.11050.25	chr8	+	3987	29	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	8129	junction_1	200833.27426383915	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	243	3110	0.0	-5	True	ATTAAA	-15
PB.11050.26	chr8	+	6385	29	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	5	0	intron_retention	FALSE	canonical	1	53763	junction_1	165063.79609888795	NA	2	NA	TRUE	NA	NA	NA	C	coding	680	2043	172	2214	0.0	-3	True	ATTAAA	-15
PB.8458.26	chr3	-	3652	7	incomplete-splice_match	HLTF	ENST00000494055.5	3633	26	11	37706	11	14931	3prime_fragment	FALSE	canonical	1	229929	junction_2	31065.910112837333	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	208	1125	35.0	-34	True	AATAAA	-18
PB.11050.28	chr8	+	3848	31	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_30	218752.67173084358	NA	1	1	TRUE	NA	NA	NA	C	coding	624	1875	1195	3069	0.0	-1	True	ATTAAA	-15
PB.11050.29	chr8	+	3075	3	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	7	9066	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_2	328.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	552	986	10.0	-1	True	AATAAA	-24
PB.10101.1	chr6	+	1777	1	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	13	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8458.25	chr3	-	3782	7	incomplete-splice_match	HLTF	ENST00000494055.5	3633	26	21	37566	-3	15071	3prime_fragment	FALSE	canonical	1	229929	junction_2	31065.910112837333	NA	3	NA	TRUE	NA	NA	NA	C	coding	305	918	198	1115	25.0	-24	True	AATAAA	-19
PB.2307.1	chr11	+	3570	11	novel_not_in_catalog	ARCN1	novel	1709	9	NA	NA	0	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	420352.8945631872	NA	3	NA	TRUE	NA	NA	NA	C	coding	511	1536	159	1694	40.0	-19	True	AATAAA	-10
PB.2307.3	chr11	+	3636	9	full-splice_match	ARCN1	ENST00000392859.7	1709	9	7	-1934	7	0	multi-exon	FALSE	canonical	1	15665	junction_1	432674.04486547376	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	152	1423	25.0	-12	True	AATAAA	-16
PB.2307.2	chr11	+	3449	8	novel_in_catalog	ARCN1	novel	1709	9	NA	NA	6	-8	no_combination_of_known_junctions	FALSE	canonical	1	1306	junction_1	404141.41339069494	NA	3	NA	TRUE	NA	NA	NA	C	coding	363	1092	153	1244	40.0	-13	True	AATAAA	-8
PB.2307.5	chr11	+	3998	10	full-splice_match	ARCN1	ENST00000264028.4	3845	10	-46	-107	17	2	multi-exon	FALSE	canonical	1	504443	junction_1	286043.4238265146	NA	2	NA	TRUE	NA	NA	NA	C	coding	511	1536	142	1677	30.0	-2	True	ATTAAA	-32
PB.2307.4	chr11	+	3702	9	novel_in_catalog	ARCN1	novel	1709	9	NA	NA	11	10	no_combination_of_known_junctions	FALSE	canonical	1	24545	junction_8	459729.3810101085	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	148	1401	20.0	-8	True	AATAAA	-27
PB.2307.7	chr11	+	4010	1	novel_in_catalog	ARCN1	novel	1709	9	NA	NA	-7	-24567	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	89	270	132	401	100.0	8	True	NA	NA
PB.2307.6	chr11	+	3887	10	full-splice_match	ARCN1	ENST00000264028.4	3845	10	-46	4	17	-3	multi-exon	FALSE	canonical	1	504443	junction_1	286043.4238265146	NA	2	NA	TRUE	NA	NA	NA	C	coding	511	1536	142	1677	30.0	-2	True	AATAAA	-13
PB.2307.9	chr11	+	3701	9	full-splice_match	ARCN1	ENST00000392859.7	1709	9	45	-2037	-1	-3	multi-exon	FALSE	canonical	1	15665	junction_1	432674.04486547376	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	114	1385	40.0	26	False	ATTAAA	-27
PB.2307.8	chr11	+	3726	9	novel_in_catalog	ARCN1	novel	1709	9	NA	NA	-7	-6	no_combination_of_known_junctions	FALSE	canonical	1	1082	junction_6	442703.5620581614	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	132	1163	40.0	8	True	AATAAA	-10
PB.9672.1	chr5	+	2330	1	genic	AC008393.1	novel	NA	NA	NA	NA	-62	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	156	471	1360	1830	45.0	NA	False	AATAAA	-14
PB.2286.1	chr11	-	2955	16	novel_not_in_catalog	ZW10	novel	2992	16	NA	NA	-18	5	any annotated donor/acceptor	FALSE	canonical	1	13372	junction_11	53731.04963178491	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	764	2443	30.0	16	False	AATAAA	-21
PB.2286.3	chr11	-	4407	15	novel_in_catalog	ZW10	novel	2992	16	NA	NA	9	-2	intron_retention	FALSE	canonical	1	114413	junction_14	30333.27585746218	NA	2	NA	TRUE	NA	NA	NA	C	coding	559	1680	2223	3902	25.0	-35	True	AATAAA	-14
PB.2286.2	chr11	-	2909	16	full-splice_match	ZW10	ENST00000200135.7	2992	16	85	-2	9	2	multi-exon	FALSE	canonical	1	114413	junction_15	31496.933306522962	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	61	2400	30.0	-35	True	AATAAA	-18
PB.2286.5	chr11	-	2565	13	novel_in_catalog	ZW10	novel	2992	16	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	623	junction_11	62180.10278953121	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	561	2060	25.0	-35	True	AATAAA	-14
PB.2286.4	chr11	-	2739	15	novel_in_catalog	ZW10	novel	2992	16	NA	NA	-1	-2	no_combination_of_known_junctions	FALSE	canonical	1	550	junction_2	57495.74536521848	NA	2	NA	TRUE	NA	NA	NA	C	coding	735	2208	27	2234	25.0	-1	True	AATAAA	-14
PB.3137.3	chr13	+	2133	6	full-splice_match	DNAJC15	ENST00000379221.3	7853	6	405	5315	405	-5315	multi-exon	FALSE	canonical	1	789413	junction_1	155052.3704512769	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	20	472	20.0	18	True	GATAAA	-27
PB.2216.1	chr11	-	2489	19	novel_not_in_catalog	NOX4	novel	4184	18	NA	NA	-91461	0	any annotated donor/acceptor	FALSE	canonical	1	610	junction_17	9091.399960782366	NA	1	NA	TRUE	NA	NA	NA	C	coding	554	1665	416	2080	20.0	NA	False	ATTAAA	-16
PB.10986.46	chr8	-	1921	11	full-splice_match	CTSB	ENST00000533455.5	2009	11	17	71	0	-56	multi-exon	FALSE	canonical	1	244599	junction_9	2028350.7039420477	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	203	1222	50.0	-3	True	NA	NA
PB.10596.5	chr7	-	2902	7	novel_not_in_catalog	TBL2	novel	4560	7	NA	NA	-3	706	intron_retention	FALSE	canonical	1	7243	junction_3	151085.12789088656	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	31	657	70.0	-1	True	NA	NA
PB.10596.4	chr7	-	3604	7	novel_in_catalog	TBL2	novel	4560	7	NA	NA	-7	708	intron_retention	FALSE	canonical	1	14894	junction_4	191336.72657335174	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	1585	2049	70.0	-5	True	NA	NA
PB.10596.7	chr7	-	3226	5	novel_in_catalog	TBL2	novel	4560	7	NA	NA	-3	-7	intron_retention	FALSE	canonical	1	3736	junction_4	185723.98493867184	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	1393	2391	50.0	-1	True	NA	NA
PB.10596.6	chr7	-	2026	8	novel_not_in_catalog	TBL2	novel	4560	7	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	153186.17638091266	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	35	1213	30.0	-5	True	NA	NA
PB.10596.1	chr7	-	2937	7	full-splice_match	TBL2	ENST00000305632.10	4560	7	208	1415	-7	712	multi-exon	TRUE	canonical	1	199997	junction_6	97969.82259079692	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	35	1378	60.0	-5	True	NA	NA
PB.10596.3	chr7	-	3006	7	full-splice_match	TBL2	ENST00000450285.5	2209	7	-86	-711	0	711	multi-exon	FALSE	canonical	1	14894	junction_4	160363.58261021526	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	714	1448	65.0	30	False	NA	NA
PB.9924.23	chr6	-	3108	8	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-31	-3	any annotated donor/acceptor	TRUE	canonical	1	11	junction_1	457558.3058133417	NA	3	1	TRUE	NA	NA	NA	C	coding	459	1380	40	1419	30.0	-12	True	AATAAA	-20
PB.10596.9	chr7	-	2366	8	novel_not_in_catalog	TBL2	novel	4560	7	NA	NA	15	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	182869.23859715182	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	113	1531	50.0	45	False	NA	NA
PB.10596.8	chr7	-	2904	7	novel_in_catalog	TBL2	novel	4560	7	NA	NA	-4	-7	intron_retention	FALSE	canonical	1	14894	junction_4	191336.72657335174	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	1605	2069	50.0	-25	True	NA	NA
PB.8711.9	chr4	-	2174	3	novel_in_catalog	DCAF16	novel	4548	3	NA	NA	-29	1269	no_combination_of_known_junctions	FALSE	canonical	1	61573	junction_1	20855.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	216	651	1076	1726	75.0	-59	False	NA	NA
PB.8435.40	chr3	+	4919	4	novel_not_in_catalog	ZBTB38	novel	1434	8	NA	NA	26	517	intron_retention	FALSE	non_canonical	0	0	junction_3	82280.30875137879	NA	3	NA	TRUE	NA	NA	NA	C	coding	326	981	1211	2191	25.0	-670	False	ATTAAA	-19
PB.9845.10	chr6	+	1961	6	incomplete-splice_match	HLA-E	ENST00000376630.4	2601	8	1002	12	957	-12	5prime_fragment	FALSE	canonical	1	5559252	junction_2	668676.8169682571	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	2	514	15.0	4	True	AATAAA	-18
PB.9924.26	chr6	-	2883	8	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-28	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	425204.02291553054	NA	3	1	TRUE	NA	NA	NA	C	coding	361	1086	37	1122	30.0	-9	True	AATAAA	-20
PB.6939.2	chr2	+	1634	7	novel_in_catalog	NIF3L1	novel	749	4	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	2508	junction_1	152797.9793820004	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	337	1389	30.0	-28	True	AATAAA	-13
PB.1013.1	chr1	-	1562	1	antisense	novelGene_TROVE2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9349.29	chr5	-	2746	9	incomplete-splice_match	MCTP1	ENST00000429576.6	3159	20	0	186525	0	16212	3prime_fragment	FALSE	canonical	1	52454	junction_3	48870.307367913854	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	164	1213	20.0	-1	True	AATAAA	-17
PB.9349.28	chr5	-	3232	10	novel_in_catalog	MCTP1	novel	5396	23	NA	NA	0	-4044	intron_retention	FALSE	canonical	1	38118	junction_5	47985.70823757558	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	164	1363	90.0	-1	True	NA	NA
PB.8738.5	chr4	+	3940	14	novel_in_catalog	FAM114A1	novel	567	3	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	129693	junction_1	78790.98724995446	NA	27	1	TRUE	NA	NA	NA	C	coding	563	1692	67	1758	25.0	-1	True	ATTAAA	-15
PB.9349.21	chr5	-	2294	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2130	164	2293	75.0	-1	True	NA	NA
PB.9349.20	chr5	-	2725	21	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	363	combination_of_known_junctions	FALSE	canonical	1	52454	junction_15	37252.94766981534	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	164	2362	25.0	-1	True	ATTAAA	-45
PB.9349.23	chr5	-	2989	15	incomplete-splice_match	MCTP1	ENST00000429576.6	3159	20	0	160563	0	1	3prime_fragment	FALSE	canonical	1	52454	junction_9	40845.532314890144	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	164	1804	25.0	-1	True	AATAAA	-22
PB.9349.22	chr5	-	3127	17	incomplete-splice_match	MCTP1	ENST00000312216.12	2337	23	-163	159646	0	1	3prime_fragment	FALSE	canonical	1	40070	junction_10	50731.49649872355	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	164	1942	25.0	-1	True	AATAAA	-22
PB.9349.25	chr5	-	3046	16	novel_in_catalog	MCTP1	novel	5396	23	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	35397	junction_9	48495.06413765792	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	166	1866	35.0	-3	True	AATAAA	-17
PB.9349.24	chr5	-	2950	14	incomplete-splice_match	MCTP1	ENST00000508509.5	2214	19	-1	158594	0	0	3prime_fragment	FALSE	canonical	1	38118	junction_9	43243.45972849468	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	165	1766	25.0	-2	True	AATAAA	-21
PB.9349.27	chr5	-	1836	14	incomplete-splice_match	MCTP1	ENST00000508509.5	2214	19	0	159707	0	-1034	3prime_fragment	FALSE	canonical	1	38118	junction_9	43243.45972849468	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	164	1765	25.0	-1	True	ATTAAA	-38
PB.9349.26	chr5	-	1875	15	incomplete-splice_match	MCTP1	ENST00000429576.6	3159	20	0	161677	0	-1034	3prime_fragment	FALSE	canonical	1	52454	junction_9	40845.532314890144	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	164	1804	25.0	-1	True	ATTAAA	-38
PB.9845.13	chr6	+	2583	3	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	3404298.0	NA	1	1	TRUE	NA	NA	NA	C	coding	266	801	749	1549	0.0	0	True	AATAAA	-30
PB.8790.7	chr4	-	3400	14	novel_in_catalog	AASDH	novel	3480	14	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	1	9991	junction_3	29355.850457092394	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	163	2991	40.0	-12	True	ATTAAA	-18
PB.11220.2	chr8	-	2951	10	novel_in_catalog	RMDN1	novel	898	5	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	53898	junction_2	134111.64822179102	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	88	993	20.0	-1	True	NA	NA
PB.2317.2	chr11	-	1394	2	full-splice_match	H2AFX	ENST00000375167.1	1373	2	-19	-2	-1	2	multi-exon	FALSE	canonical	1	161223	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	75	506	25.0	-4	True	ATTAAA	-17
PB.2317.1	chr11	-	1592	1	full-splice_match	H2AFX	ENST00000530167.1	1614	1	-1	23	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	143	432	75	506	25.0	-4	True	ATTAAA	-17
PB.9924.28	chr6	-	2754	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-35	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	337687.29984030715	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	44	1390	30.0	-16	True	AATAAA	-20
PB.7101.2	chr2	-	2960	3	full-splice_match	ANKMY1	ENST00000484526.5	2969	3	9	0	9	0	multi-exon	FALSE	canonical	1	3877	junction_2	45881.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	443	1018	15.0	-43	True	NA	NA
PB.3934.8	chr15	-	2222	12	full-splice_match	INTS14	ENST00000431261.6	1980	12	39	-281	4	-2	multi-exon	FALSE	canonical	1	20784	junction_10	140298.31277691683	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	279	1598	40.0	22	False	AATAAA	-15
PB.3934.9	chr15	-	1872	10	novel_in_catalog	INTS14	novel	2615	12	NA	NA	3	-2	no_combination_of_known_junctions	FALSE	canonical	1	2404	junction_9	135624.99589058422	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	160	1248	40.0	12	True	AATAAA	-15
PB.8738.4	chr4	+	3742	14	novel_in_catalog	FAM114A1	novel	567	3	NA	NA	17	0	no_combination_of_known_junctions	FALSE	canonical	1	4563	junction_2	125750.58045038786	NA	3	NA	TRUE	NA	NA	NA	C	coding	356	1071	490	1560	25.0	-668	False	ATTAAA	-15
PB.7101.3	chr2	-	3473	6	full-splice_match	ANKMY1	ENST00000496300.5	1569	6	-21	-1883	-13	-1	multi-exon	FALSE	canonical	1	18030	junction_2	33726.43738434286	NA	3	NA	TRUE	NA	NA	NA	C	coding	246	741	181	921	15.0	-12	True	NA	NA
PB.3934.2	chr15	-	2586	12	novel_in_catalog	INTS14	novel	2615	12	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	8021	junction_11	128719.15199404521	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	382	1938	15.0	-1	True	AATAAA	-39
PB.3934.3	chr15	-	2690	12	novel_in_catalog	INTS14	novel	2615	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	23139	junction_11	124941.2484260681	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	509	2065	40.0	-1	True	AATAAA	-16
PB.11993.1	chrX	-	4916	33	full-splice_match	PHKA2	ENST00000379942.4	5559	33	182	461	182	211	multi-exon	TRUE	canonical	1	99731	junction_4	47881.43725195078	NA	1	NA	TRUE	NA	NA	NA	C	coding	1235	3708	485	4192	90.0	571	False	NA	NA
PB.3934.1	chr15	-	2279	12	full-splice_match	INTS14	ENST00000313182.6	2393	12	114	0	0	0	multi-exon	FALSE	canonical	1	122935	junction_11	101154.24091778304	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	97	1653	45.0	-1	True	AATAAA	-17
PB.3934.6	chr15	-	2425	12	novel_in_catalog	INTS14	novel	2615	12	NA	NA	2	-13	combination_of_known_junctions	FALSE	canonical	1	8021	junction_11	159970.03094583037	NA	4	NA	TRUE	NA	NA	NA	C	coding	439	1320	464	1783	30.0	11	True	AATAAA	-33
PB.3934.7	chr15	-	2286	11	novel_in_catalog	INTS14	novel	2615	12	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	6352	junction_10	129823.7345668734	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	343	1662	40.0	8	True	AATAAA	-15
PB.3934.4	chr15	-	2080	11	full-splice_match	INTS14	ENST00000420799.6	1741	11	47	-386	28	-8	multi-exon	FALSE	canonical	1	13880	junction_10	127688.06427575758	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	114	1433	15.0	-8	True	AATAAA	-38
PB.3934.5	chr15	-	2590	12	full-splice_match	INTS14	ENST00000573314.5	2615	12	13	12	0	-12	multi-exon	FALSE	canonical	1	59344	junction_11	116055.62329730352	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	391	1947	30.0	7	True	AATAAA	-34
PB.7989.2	chr3	+	3148	14	full-splice_match	RBMS3	ENST00000452462.5	1547	14	-487	-1114	-8	-2	multi-exon	FALSE	canonical	1	43166	junction_11	12985.829342632544	NA	9	NA	TRUE	NA	NA	NA	C	coding	421	1266	618	1883	20.0	-6	True	TTTAAA	-22
PB.11220.3	chr8	-	2946	9	full-splice_match	RMDN1	ENST00000430676.6	1106	9	-78	-1762	27	0	multi-exon	FALSE	canonical	1	75862	junction_5	135270.64703857366	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	134	988	20.0	-3	True	NA	NA
PB.8493.13	chr3	+	3411	18	full-splice_match	GFM1	ENST00000486715.5	3721	18	304	6	-15	0	multi-exon	FALSE	canonical	1	243185	junction_1	122751.98640564996	NA	2	NA	TRUE	NA	NA	NA	C	coding	751	2256	54	2309	15.0	55	True	AATAAA	-13
PB.3208.9	chr13	-	4034	7	novel_in_catalog	EDNRB	novel	4471	8	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	4227	junction_2	94026.57032530163	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	127	1137	5.0	11	True	ATTAAA	-18
PB.5455.6	chr18	-	3186	5	incomplete-splice_match	TPGS2	ENST00000585635.5	1070	7	32	4502	7	-2744	3prime_fragment	FALSE	canonical	1	1692	junction_3	480010.43531911884	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	544	843	75.0	-3	True	ATTAAA	-15
PB.5455.7	chr18	-	1837	2	full-splice_match	TPGS2	ENST00000591648.1	790	2	15	-1062	-8	1062	multi-exon	FALSE	canonical	1	777705	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	60	183	230	412	90.0	5	True	NA	NA
PB.3208.6	chr13	-	5826	6	incomplete-splice_match	EDNRB	ENST00000643890.1	1689	7	652	-4017	-1	2	5prime_fragment	FALSE	canonical	1	178263	junction_5	21036.15566209758	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	259	1488	5.0	-2	True	ATTAAA	-20
PB.3208.7	chr13	-	4158	8	full-splice_match	EDNRB	ENST00000475537.2	2555	8	161	-1764	161	-60	multi-exon	FALSE	canonical	1	1182	junction_7	79706.00861328602	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	216	1544	60.0	352	False	ATTAAA	-17
PB.5455.2	chr18	-	4134	7	full-splice_match	TPGS2	ENST00000334295.8	4030	7	401	-505	-7	505	multi-exon	FALSE	canonical	1	777705	junction_6	210095.17116905746	NA	4	NA	TRUE	NA	NA	NA	C	coding	300	903	28	930	20.0	9	True	NA	NA
PB.5455.3	chr18	-	3867	7	full-splice_match	TPGS2	ENST00000334295.8	4030	7	161	2	2	-2	multi-exon	FALSE	canonical	1	777705	junction_6	210095.17116905746	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	268	1170	25.0	-33	True	NA	NA
PB.3208.2	chr13	-	4243	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	182	46	-103	-1	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	242	1570	40.0	-5	True	AATATA	-13
PB.3208.3	chr13	-	3618	7	novel_not_in_catalog	EDNRB	novel	4471	8	NA	NA	6508	0	any annotated donor/acceptor	FALSE	canonical	1	109	junction_6	86349.0106114907	NA	2	1	TRUE	NA	NA	NA	C	coding	270	813	87	899	10.0	7290	False	ATTAAA	-24
PB.9255.8	chr5	+	2601	12	novel_not_in_catalog	TRAPPC13	novel	3221	13	NA	NA	-13	-146	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	75921.84428772517	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	41	601	35.0	-17	True	ATTAAA	-10
PB.811.1	chr1	-	2647	6	full-splice_match	RIT1	ENST00000368323.7	3445	6	33	765	-27	-765	multi-exon	FALSE	canonical	1	224149	junction_5	83095.88845087342	NA	3	NA	TRUE	NA	NA	NA	C	coding	219	660	173	832	30.0	0	True	TTTAAA	-26
PB.10169.14	chr6	-	6173	39	full-splice_match	LAMA4	ENST00000522006.5	6438	39	-11	276	1	157	multi-exon	FALSE	canonical	1	121944	junction_38	70411.10512049063	NA	0	NA	TRUE	NA	NA	NA	C	coding	1816	5451	422	5872	50.0	0	True	AATAAA	-15
PB.9845.15	chr6	+	2426	5	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	intron_retention	FALSE	non_canonical	0	0	junction_4	2563552.4253855236	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	619	1329	15.0	0	True	AATAAA	-18
PB.8949.2	chr4	-	5567	2	novel_not_in_catalog	ARSJ	novel	4657	2	NA	NA	-691	-28371	intron_retention	FALSE	canonical	1	500	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	133	402	1296	1697	20.0	-441	False	NA	NA
PB.8949.1	chr4	-	2487	2	full-splice_match	ARSJ	ENST00000315366.7	4657	2	90	2080	0	-12	multi-exon	FALSE	canonical	1	93974	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1632	856	2487	75.0	1	True	TATAAA	-43
PB.10169.12	chr6	-	6248	38	novel_not_in_catalog	LAMA4	novel	6547	39	NA	NA	5	175	intron_retention	FALSE	canonical	1	2363	junction_32	79186.91755462372	NA	1	NA	TRUE	NA	NA	NA	C	coding	1827	5484	446	5929	25.0	126	False	AATAAA	-33
PB.3946.1	chr15	+	3986	13	incomplete-splice_match	PIAS1	ENST00000249636.10	8115	14	122	7881	-8	-2099	3prime_fragment	FALSE	canonical	1	187752	junction_1	76058.1937011154	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	27	1730	85.0	0	True	NA	NA
PB.10487.3	chr7	+	4511	22	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	41	23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	198740.10035562798	NA	2	NA	TRUE	NA	NA	NA	B	coding	895	2688	166	2853	15.0	0	True	ATTAAA	-39
PB.3946.3	chr15	+	2383	14	full-splice_match	PIAS1	ENST00000249636.10	8115	14	122	5610	-8	172	multi-exon	FALSE	canonical	1	187752	junction_1	73115.53460050169	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	27	1982	20.0	0	True	NA	NA
PB.3946.2	chr15	+	2126	14	full-splice_match	PIAS1	ENST00000249636.10	8115	14	136	5853	-3	-71	multi-exon	FALSE	canonical	1	187752	junction_1	73115.53460050169	NA	1	NA	TRUE	NA	NA	NA	C	coding	651	1956	13	1968	45.0	0	True	ATTAAA	-15
PB.3946.5	chr15	+	5594	14	full-splice_match	PIAS1	ENST00000249636.10	8115	14	136	2385	-3	703	multi-exon	FALSE	canonical	1	187752	junction_1	73115.53460050169	NA	4	NA	TRUE	NA	NA	NA	C	coding	651	1956	13	1968	30.0	0	True	AATAAA	-16
PB.3946.4	chr15	+	3895	14	full-splice_match	PIAS1	ENST00000249636.10	8115	14	136	4084	-3	-996	multi-exon	FALSE	canonical	1	187752	junction_1	73115.53460050169	NA	3	NA	TRUE	NA	NA	NA	C	coding	651	1956	13	1968	80.0	0	True	CATAAA	-10
PB.3946.7	chr15	+	4890	14	full-splice_match	PIAS1	ENST00000249636.10	8115	14	137	3088	-2	0	multi-exon	FALSE	canonical	1	187752	junction_1	73115.53460050169	NA	2	NA	TRUE	NA	NA	NA	C	coding	651	1956	12	1967	70.0	1	True	NA	NA
PB.3946.6	chr15	+	2434	8	incomplete-splice_match	PIAS1	ENST00000249636.10	8115	14	136	27628	-3	12257	3prime_fragment	FALSE	canonical	1	187752	junction_1	64638.40537693879	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	13	1098	40.0	0	True	AATAAA	-19
PB.3946.9	chr15	+	2515	14	full-splice_match	PIAS1	ENST00000249636.10	8115	14	137	5463	-2	319	multi-exon	FALSE	canonical	1	187752	junction_1	73115.53460050169	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	12	1967	15.0	1	True	TATAAA	-18
PB.3946.8	chr15	+	3963	14	novel_not_in_catalog	PIAS1	novel	8115	14	NA	NA	-2	-996	intron_retention	FALSE	canonical	0	0	junction_7	119736.70869974887	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	12	959	80.0	1	True	CATAAA	-10
PB.10487.8	chr7	+	4580	23	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	39	-21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	178886.2008643939	NA	2	NA	TRUE	NA	NA	NA	B	coding	932	2799	168	2966	30.0	-2	True	AATACA	-23
PB.4108.1	chr15	-	3715	7	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	0	-996	any annotated donor/acceptor	FALSE	canonical	1	6127	junction_2	34199.007016123855	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	158	1456	35.0	9	True	NA	NA
PB.4108.6	chr15	-	4048	6	novel_in_catalog	LINS1	novel	511	4	NA	NA	-21	-2	intron_retention	FALSE	canonical	1	69133	junction_3	15004.81696789401	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	189	1499	25.0	4	True	AATAAA	-20
PB.4108.7	chr15	-	2598	8	novel_not_in_catalog	LINS1	novel	511	4	NA	NA	-1	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	44891.86771542917	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1524	1074	2597	40.0	-2	True	AATAAA	-17
PB.4108.4	chr15	-	2555	8	novel_in_catalog	LINS1	novel	511	4	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	1	5224	junction_6	42663.74778164138	NA	2	NA	TRUE	NA	NA	NA	C	coding	757	2274	275	2548	25.0	1	True	AATAAA	-26
PB.4108.5	chr15	-	2447	7	full-splice_match	LINS1	ENST00000314742.12	4821	7	56	2318	0	3	multi-exon	FALSE	canonical	1	21658	junction_2	28988.326578220334	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	168	2441	25.0	-1	True	AATAAA	-25
PB.6981.1	chr2	+	2618	7	full-splice_match	RPE	ENST00000429907.5	925	7	-64	-1629	-6	-7	multi-exon	TRUE	canonical	1	18074	junction_6	42206.141797992175	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	85	714	35.0	-65	False	AATAAA	-18
PB.4378.4	chr16	+	2549	11	full-splice_match	PRR14	ENST00000542965.2	2316	11	-235	2	19	-1	multi-exon	FALSE	canonical	1	113653	junction_1	148196.5433746685	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	692	2449	15.0	-11	True	AGTAAA	-18
PB.6981.3	chr2	+	4283	6	full-splice_match	RPE	ENST00000359429.10	2569	6	41	-1755	-18	1072	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	3	NA	TRUE	NA	NA	NA	C	coding	228	687	57	743	55.0	8	True	CATAAA	-36
PB.6981.2	chr2	+	5465	6	full-splice_match	RPE	ENST00000359429.10	2569	6	50	-2946	-9	2263	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	48	734	15.0	17	True	ATTAAA	-43
PB.4378.1	chr16	+	1978	12	novel_in_catalog	PRR14	novel	554	4	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	1	57077	junction_1	176706.9204167087	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	117	1874	15.0	-6	True	AGTAAA	-22
PB.6981.4	chr2	+	3222	6	full-splice_match	RPE	ENST00000359429.10	2569	6	73	-726	-1	43	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	25	711	70.0	-5	True	NA	NA
PB.4378.3	chr16	+	2224	12	full-splice_match	PRR14	ENST00000300835.8	2198	12	-55	29	32	-1	multi-exon	FALSE	canonical	1	55257	junction_1	177021.60185923614	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	367	2124	15.0	-9536	False	AGTAAA	-18
PB.4378.2	chr16	+	2069	11	novel_in_catalog	PRR14	novel	554	4	NA	NA	3	8	intron_retention	FALSE	canonical	1	57077	junction_1	160582.30327417774	NA	4	NA	TRUE	NA	NA	NA	C	coding	526	1581	379	1959	25.0	5	True	AGTAAA	-28
PB.6981.9	chr2	+	1752	6	full-splice_match	RPE	ENST00000359429.10	2569	6	57	760	-2	-410	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	41	727	65.0	-21	True	NA	NA
PB.6981.8	chr2	+	4322	6	novel_not_in_catalog	RPE	novel	2569	6	NA	NA	-9	1104	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66212.51047770353	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	277	750	15.0	17	True	AATATA	-20
PB.9845.14	chr6	+	2549	4	novel_not_in_catalog	HLA-E	novel	2601	8	NA	NA	0	-12	intron_retention	FALSE	canonical	1	827	junction_3	2959028.888528615	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	749	1459	15.0	0	True	AATAAA	-18
PB.11391.6	chr8	+	2282	11	novel_in_catalog	GPAA1	novel	878	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	546511	junction_1	229827.17906942597	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	693	2192	10.0	-16	True	AATAAA	-22
PB.11220.1	chr8	-	2965	10	full-splice_match	RMDN1	ENST00000406452.7	3063	10	98	0	-1	0	multi-exon	FALSE	canonical	1	371913	junction_6	50684.12393332738	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	63	1007	20.0	5674	False	NA	NA
PB.1223.2	chr1	-	4447	14	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	27	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_7	50907.70549026958	NA	4	1	TRUE	NA	NA	NA	B	coding	113	342	1147	1488	10.0	-1	True	ATTAAA	-15
PB.11604.1	chr9	-	5848	7	full-splice_match	ZFAND5	ENST00000376962.9	2785	7	-17	-3046	-17	13	multi-exon	FALSE	canonical	1	124287	junction_4	215317.51326851908	NA	3	NA	TRUE	NA	NA	NA	C	coding	213	642	666	1307	35.0	-7	True	AATAAA	-33
PB.9800.6	chr6	+	4385	10	novel_in_catalog	BTN3A3	novel	671	4	NA	NA	4	-1	intron_retention	FALSE	canonical	1	7982	junction_1	47035.48870327123	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	2256	3383	10.0	-3	True	AATAAA	-16
PB.811.3	chr1	-	2145	6	full-splice_match	RIT1	ENST00000368323.7	3445	6	55	1245	-5	1130	multi-exon	FALSE	canonical	1	224149	junction_5	83095.88845087342	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	151	810	40.0	-1	True	AGTAAA	-12
PB.3557.9	chr14	-	2223	18	novel_in_catalog	ABCD4	novel	3003	19	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	19861	junction_17	92627.80045838175	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	204	1763	45.0	-1	True	AAGAAA	-12
PB.521.5	chr1	-	4867	2	full-splice_match	RBMXL1	ENST00000321792.5	4799	2	-69	1	-69	-1	multi-exon	FALSE	canonical	1	32595	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	498	1670	30.0	157	False	NA	NA
PB.521.6	chr1	-	3776	3	full-splice_match	RBMXL1	ENST00000399794.6	5084	3	328	980	127	-980	multi-exon	FALSE	canonical	1	49575	junction_1	34774.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	389	1561	85.0	-4	True	AATACA	-14
PB.521.7	chr1	-	3787	2	full-splice_match	RBMXL1	ENST00000321792.5	4799	2	29	983	16	-980	multi-exon	FALSE	canonical	1	32595	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	400	1572	85.0	13	True	AATACA	-14
PB.521.1	chr1	-	1787	13	full-splice_match	KYAT3	ENST00000370491.7	1868	13	-3	84	-3	-41	multi-exon	FALSE	canonical	1	136055	junction_12	72952.82878853979	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	199	1461	30.0	219	False	NA	NA
PB.521.2	chr1	-	1839	14	full-splice_match	KYAT3	ENST00000260508.8	2070	14	267	-36	122	-7	multi-exon	FALSE	canonical	1	89729	junction_12	96014.39670692141	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	72	1436	15.0	3	True	NA	NA
PB.7686.3	chr22	-	4076	21	novel_not_in_catalog	AP1B1	novel	3560	4	NA	NA	13	-64	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	297936.1455514252	NA	1	1	TRUE	NA	NA	NA	C	coding	985	2958	175	3132	40.0	-6	True	AATATA	-10
PB.6805.13	chr2	+	2161	1	novel_in_catalog	TANK	novel	2152	8	NA	NA	-4	-307	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5	True	NA	NA
PB.11391.5	chr8	+	2162	11	novel_in_catalog	GPAA1	novel	878	6	NA	NA	3	-2	intron_retention	FALSE	canonical	1	546511	junction_1	207033.25801863335	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	115	1569	10.0	-17	True	AATAAA	-21
PB.11220.6	chr8	-	1084	10	novel_in_catalog	RMDN1	novel	898	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	33870	junction_1	139963.52202636475	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	62	979	15.0	5675	False	NA	NA
PB.6351.25	chr2	-	2219	15	incomplete-splice_match	ITSN2	ENST00000406921.7	4563	30	-299	73410	-93	-468	3prime_fragment	FALSE	canonical	1	115515	junction_14	68178.52209247636	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1677	541	2217	70.0	-24	True	NA	NA
PB.11387.7	chr8	-	3735	9	novel_not_in_catalog	PARP10	novel	2179	4	NA	NA	26	-16	intron_retention	FALSE	non_canonical	0	0	junction_4	145322.68347112916	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	47	1573	25.0	14	True	AATAAA	-18
PB.8757.8	chr4	+	4357	19	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	11	10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	153900.38975375606	NA	2	NA	TRUE	NA	NA	NA	C	coding	568	1707	140	1846	10.0	-17	True	AATAAA	-33
PB.8757.9	chr4	+	2963	18	full-splice_match	SLC30A9	ENST00000264451.11	6218	18	41	3214	11	867	multi-exon	FALSE	canonical	1	386252	junction_8	93952.07859218647	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	140	1846	60.0	-17	True	AGTAAA	-34
PB.8757.1	chr4	+	3145	18	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	-6	8911	any annotated donor/acceptor	FALSE	canonical	1	6381	junction_17	156980.5936196902	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	157	1863	20.0	-63	False	AATAAA	-22
PB.8757.2	chr4	+	3209	18	full-splice_match	SLC30A9	ENST00000264451.11	6218	18	44	2965	-11	1116	multi-exon	FALSE	canonical	1	386252	junction_8	93952.07859218647	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	137	1843	60.0	-14	True	NA	NA
PB.8757.3	chr4	+	3368	19	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	5	1145	any annotated donor/acceptor	TRUE	canonical	1	20	junction_7	193011.2380931404	NA	11	1	TRUE	NA	NA	NA	C	coding	328	987	987	1973	20.0	-23	True	AATAAA	-16
PB.8757.4	chr4	+	3138	18	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	-12	1116	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	156612.51224514926	NA	3	1	TRUE	NA	NA	NA	C	coding	519	1560	213	1772	60.0	-15	True	NA	NA
PB.3557.8	chr14	-	2443	17	full-splice_match	ABCD4	ENST00000481935.5	2336	17	-71	-36	-11	18	multi-exon	FALSE	canonical	1	50697	junction_15	88210.50900464963	NA	2	NA	TRUE	NA	NA	NA	C	coding	433	1302	446	1747	25.0	59	False	ATTAAA	-21
PB.8757.6	chr4	+	3308	18	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	11	1147	any annotated donor/acceptor	FALSE	canonical	1	4969	junction_12	157388.79788296556	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	140	1261	20.0	-17	True	AATAAA	-18
PB.8757.7	chr4	+	3170	19	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	10	8911	any annotated donor/acceptor	FALSE	canonical	1	1131	junction_18	153691.91621979253	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	141	1883	20.0	-18	True	AATAAA	-22
PB.10183.7	chr6	-	5631	7	novel_in_catalog	AL132671.2	novel	930	7	NA	NA	-28930	-242113	intron_retention	FALSE	canonical	1	265041	junction_5	35868.05412782615	NA	0	NA	TRUE	NA	NA	NA	B	coding	311	936	214	1149	40.0	-10	True	AATAAA	-19
PB.7686.4	chr22	-	3929	21	novel_not_in_catalog	AP1B1	novel	3560	4	NA	NA	18	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	331210.72098825546	NA	1	1	TRUE	NA	NA	NA	C	coding	786	2361	170	2530	20.0	-1	True	AATAAA	-21
PB.6722.3	chr2	+	1645	6	full-splice_match	TSN	ENST00000389682.7	3420	6	57	1718	45	150	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	191	877	35.0	-924	False	ATTAAA	-27
PB.10253.3	chr6	-	3297	5	novel_in_catalog	FUCA2	novel	2356	7	NA	NA	-29	-667	intron_retention	FALSE	canonical	1	627233	junction_4	92671.51968478503	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	86	901	25.0	0	True	ATTAAA	-25
PB.10253.2	chr6	-	2390	7	full-splice_match	FUCA2	ENST00000002165.10	2356	7	-34	0	-34	0	multi-exon	FALSE	canonical	1	627233	junction_6	173087.9572941168	NA	1	1	TRUE	NA	NA	NA	C	coding	467	1404	91	1494	35.0	-5	True	NA	NA
PB.10253.1	chr6	-	3258	7	full-splice_match	FUCA2	ENST00000002165.10	2356	7	-46	-856	-46	856	multi-exon	FALSE	canonical	1	627233	junction_6	173087.9572941168	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	103	1506	15.0	-17	True	NA	NA
PB.780.13	chr1	-	6489	15	novel_in_catalog	ADAR	novel	6610	15	NA	NA	12	3	intron_retention	FALSE	canonical	1	14240	junction_10	414874.3416601512	NA	4	NA	TRUE	NA	NA	NA	C	coding	1207	3624	153	3776	85.0	27	True	AATATA	-11
PB.10253.5	chr6	-	1708	7	full-splice_match	FUCA2	ENST00000002165.10	2356	7	-29	677	-29	-677	multi-exon	FALSE	canonical	1	627233	junction_6	173087.9572941168	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	86	1489	15.0	0	True	ATTAAA	-15
PB.10253.4	chr6	-	3047	6	novel_in_catalog	FUCA2	novel	2356	7	NA	NA	-11	-667	intron_retention	FALSE	canonical	1	627233	junction_5	186016.88897452294	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	68	883	25.0	18	True	ATTAAA	-25
PB.6541.1	chr2	-	3348	6	full-splice_match	TEX261	ENST00000272438.8	3441	6	91	2	19	-2	multi-exon	FALSE	canonical	1	319402	junction_5	146320.112101652	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	98	688	35.0	-1	True	NA	NA
PB.6722.1	chr2	+	3266	6	full-splice_match	TSN	ENST00000389682.7	3420	6	151	3	-1	-3	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	97	783	15.0	0	True	ATTAAA	-26
PB.11152.29	chr8	-	3327	14	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-17	410	combination_of_known_junctions	FALSE	canonical	1	298693	junction_4	596317.4509637706	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	243	1181	30.0	-7	True	NA	NA
PB.11152.28	chr8	-	3711	14	full-splice_match	ASPH	ENST00000356457.9	3730	14	23	-4	-5	4	multi-exon	FALSE	canonical	1	1265348	junction_13	406930.56471317925	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	203	1144	30.0	18	True	NA	NA
PB.11152.25	chr8	-	2057	15	novel_in_catalog	ASPH	novel	5268	25	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	25844	junction_1	707958.845225988	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	222	1274	25.0	-1	True	AATAAA	-14
PB.3339.9	chr14	+	2503	15	novel_in_catalog	DCAF11	novel	849	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	14118	junction_2	244218.46734686138	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	704	1783	5.0	-32	True	AATAAA	-16
PB.11152.27	chr8	-	1850	15	novel_in_catalog	ASPH	novel	5268	25	NA	NA	11	-131	combination_of_known_junctions	FALSE	canonical	1	25844	junction_1	707958.845225988	NA	3	NA	TRUE	NA	NA	NA	C	coding	350	1053	144	1196	35.0	77	True	ATTAAA	-25
PB.6995.1	chr2	-	2546	1	antisense	novelGene_XRCC5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11152.21	chr8	-	4386	22	novel_in_catalog	ASPH	novel	5268	25	NA	NA	5	-674	no_combination_of_known_junctions	FALSE	canonical	1	54781	junction_12	778347.3691548852	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	212	2257	20.0	9	True	AATAAA	-17
PB.7686.8	chr22	-	3923	21	full-splice_match	AP1B1	ENST00000317368.11	3903	21	-13	-7	-13	7	multi-exon	FALSE	canonical	1	24719	junction_6	295898.15709393576	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	201	2960	25.0	2	True	AATAAA	-20
PB.11152.23	chr8	-	4492	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	4	-675	no_combination_of_known_junctions	FALSE	canonical	1	7684	junction_1	821492.5018929717	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	222	2246	20.0	-1	True	AATAAA	-16
PB.2002.2	chr11	+	1954	5	novel_not_in_catalog	TTC9C	novel	606	3	NA	NA	-49	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	195715.76179117511	NA	1	NA	TRUE	NA	NA	NA	B	coding	171	516	274	789	40.0	-11	True	ATTAAA	-18
PB.10905.1	chr7	-	2458	1	antisense	novelGene_CUL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7686.9	chr22	-	3798	21	novel_not_in_catalog	AP1B1	novel	3560	4	NA	NA	-14	7	any annotated donor/acceptor	TRUE	canonical	0	0	junction_8	299725.1362328325	NA	2	1	TRUE	NA	NA	NA	C	coding	877	2634	202	2835	25.0	1	True	AATAAA	-20
PB.10183.1	chr6	-	4548	9	full-splice_match	GOPC	ENST00000368498.6	4450	9	-153	55	11	-52	multi-exon	FALSE	canonical	1	24382	junction_7	132469.4172967387	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	230	1618	40.0	24	False	AATAAA	-19
PB.5946.1	chr19	-	2866	3	full-splice_match	LINC00665	ENST00000591372.1	2732	3	-107	-27	-38	27	multi-exon	FALSE	canonical	1	40268	junction_1	112829.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	139	420	1799	2218	20.0	-4	True	NA	NA
PB.3339.20	chr14	+	2583	14	full-splice_match	DCAF11	ENST00000558914.5	2342	14	-8	-233	0	0	multi-exon	FALSE	canonical	1	14118	junction_1	201284.8148928226	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	784	1863	5.0	-8	True	AATAAA	-16
PB.9211.1	chr5	-	2727	4	novel_not_in_catalog	CCL28	novel	1342	4	NA	NA	113	679	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41626.87877108037	NA	0	NA	TRUE	NA	NA	NA	A	coding	80	243	195	437	30.0	-24	True	AGTAAA	-19
PB.1704.1	chr10	+	2268	5	incomplete-splice_match	ZRANB1	ENST00000359653.4	5695	9	32156	1749	-7132	-1749	5prime_fragment	TRUE	canonical	1	373526	junction_1	29300.855964459468	NA	2	NA	TRUE	NA	NA	NA	A	coding	117	354	467	820	65.0	NA	False	AATGAA	-35
PB.6722.5	chr2	+	2852	6	novel_not_in_catalog	TSN	novel	555	6	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	316587.0441768582	NA	8	2	TRUE	NA	NA	NA	C	coding	263	792	136	927	20.0	-39	True	AATAAA	-21
PB.9545.19	chr5	+	2560	17	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	34233	junction_11	163141.06005688568	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	26	2560	15.0	-8	True	NA	NA
PB.3339.4	chr14	+	2814	16	novel_in_catalog	DCAF11	novel	849	7	NA	NA	-5	-1	intron_retention	TRUE	canonical	1	5846	junction_1	227251.382208768	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	455	2095	5.0	-40	True	AATAAA	-15
PB.1083.1	chr1	-	2606	9	novel_in_catalog	FCAMR	novel	2752	9	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	1	1706	junction_8	993.9739684720118	NA	3	NA	TRUE	NA	NA	NA	A	coding	577	1734	326	2059	10.0	-74	False	NA	NA
PB.6722.8	chr2	+	2642	5	full-splice_match	TSN	ENST00000495112.1	605	5	-27	-2010	-1	0	multi-exon	FALSE	canonical	1	4794	junction_1	350087.3991865281	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-26	True	AATAAA	-23
PB.12239.19	chrX	-	2558	10	incomplete-splice_match	SEPT6	ENST00000394610.5	4694	11	174	7245	174	4623	3prime_fragment	FALSE	canonical	1	581245	junction_1	212841.63426516595	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	92	1375	80.0	-6	True	NA	NA
PB.12239.18	chrX	-	2160	11	novel_not_in_catalog	SEPT6	novel	2609	11	NA	NA	-2289	-14	any annotated donor/acceptor	FALSE	canonical	1	228	junction_10	352977.98885257705	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	86	1390	30.0	-2264	False	AATAAA	-16
PB.6722.9	chr2	+	1884	6	full-splice_match	TSN	ENST00000389682.7	3420	6	125	1411	-1	457	multi-exon	FALSE	canonical	1	527218	junction_1	124047.21860872174	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	123	809	70.0	-26	True	NA	NA
PB.171.5	chr1	+	3656	1	genic	PNRC2	novel	NA	NA	NA	NA	-10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	139	420	1657	2076	30.0	-26	True	AATAAA	-30
PB.12239.11	chrX	-	1764	11	novel_in_catalog	SEPT6	novel	2609	11	NA	NA	202	-772	combination_of_known_junctions	FALSE	canonical	1	65139	junction_1	332146.94803759677	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	64	1347	80.0	-10	True	NA	NA
PB.12239.12	chrX	-	2110	10	full-splice_match	SEPT6	ENST00000354416.7	4652	10	170	2372	170	-8	multi-exon	FALSE	canonical	1	29767	junction_1	346152.3887098796	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	96	1391	30.0	-10	True	AATAAA	-22
PB.12239.15	chrX	-	2249	12	novel_not_in_catalog	SEPT6	novel	2609	11	NA	NA	-2274	-13	any annotated donor/acceptor	FALSE	canonical	1	231	junction_11	341572.1823544478	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	75	1478	30.0	-2249	False	AATAAA	-17
PB.12239.14	chrX	-	2161	11	novel_in_catalog	SEPT6	novel	2609	11	NA	NA	179	-10	combination_of_known_junctions	FALSE	canonical	1	18942	junction_2	344554.54732162517	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	87	1562	30.0	-1	True	AATAAA	-20
PB.12239.17	chrX	-	1948	10	novel_in_catalog	SEPT6	novel	2609	11	NA	NA	203	-13	no_combination_of_known_junctions	FALSE	canonical	1	22058	junction_4	340091.5847585111	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	63	890	30.0	-9	True	AATAAA	-17
PB.12239.16	chrX	-	2112	11	novel_not_in_catalog	SEPT6	novel	2609	11	NA	NA	185	-13	any annotated donor/acceptor	FALSE	canonical	1	306	junction_5	354785.0744913602	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	81	848	30.0	5	True	AATAAA	-17
PB.4838.2	chr17	+	2827	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	0	-193	any annotated donor/acceptor	FALSE	canonical	1	52433	junction_6	456602.5065437384	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	317	1051	85.0	-34	False	NA	NA
PB.3002.5	chr12	-	983	9	full-splice_match	EIF2B1	ENST00000424014.6	2477	9	93	1401	15	-69	multi-exon	FALSE	canonical	1	297794	junction_8	176610.69143599432	NA	4	NA	TRUE	NA	NA	NA	C	coding	289	867	117	983	20.0	-27	True	NA	NA
PB.4838.1	chr17	+	1478	1	novel_in_catalog	WSB1	novel	943	4	NA	NA	-1	-6362	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-3	True	AAAAAG	-29
PB.4838.6	chr17	+	3005	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	2	-13	any annotated donor/acceptor	FALSE	canonical	1	52433	junction_6	456602.5065437384	NA	4	NA	TRUE	NA	NA	NA	C	coding	244	735	315	1049	75.0	-32	False	ATTAAA	-7
PB.4838.7	chr17	+	2383	11	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	1	-18	any annotated donor/acceptor	FALSE	canonical	1	846	junction_6	540269.5359215528	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	309	1043	90.0	-26	False	NA	NA
PB.4838.4	chr17	+	1813	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	0	-463	any annotated donor/acceptor	FALSE	canonical	1	52433	junction_6	456602.5065437384	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	317	1051	30.0	-34	False	AATACA	-15
PB.4838.5	chr17	+	3088	10	novel_not_in_catalog	WSB1	novel	943	4	NA	NA	2	-15	any annotated donor/acceptor	FALSE	canonical	1	9871	junction_6	466878.3421054259	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	315	1049	85.0	-32	False	NA	NA
PB.4838.8	chr17	+	1995	6	incomplete-splice_match	WSB1	ENST00000467843.6	4187	9	7	4900	-3	-116	3prime_fragment	FALSE	canonical	1	787038	junction_1	102773.75731498776	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	297	1031	55.0	-14	False	TTTAAA	-18
PB.4838.9	chr17	+	5028	8	novel_in_catalog	WSB1	novel	943	4	NA	NA	-2	-12	intron_retention	FALSE	canonical	1	787038	junction_1	313926.359398155	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	296	1039	75.0	-13	False	ATTAAA	-8
PB.8212.2	chr3	-	1522	9	full-splice_match	PSMD6	ENST00000492933.5	1495	9	-22	-5	-16	0	multi-exon	FALSE	canonical	1	63403	junction_8	704756.0585463132	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	76	1404	30.0	-23	True	AATAAA	-23
PB.11868.10	chr9	-	2786	19	novel_in_catalog	DDX31	novel	2343	2	NA	NA	41	-2	no_combination_of_known_junctions	FALSE	canonical	1	3297	junction_3	43747.88645166363	NA	9	1	TRUE	NA	NA	NA	C	coding	524	1575	269	1843	10.0	-4	True	NA	NA
PB.11827.9	chr9	+	1327	8	full-splice_match	SET	ENST00000322030.12	2915	8	342	1246	342	248	multi-exon	FALSE	canonical	1	178448	junction_4	712125.1037060032	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	16	849	80.0	-5192	False	NA	NA
PB.9545.11	chr5	+	1358	6	incomplete-splice_match	TCERG1	ENST00000507175.5	1984	11	11	10478	-10	-71	3prime_fragment	FALSE	canonical	1	352318	junction_3	48765.75243918625	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1329	29	1357	40.0	-11	True	AATAGA	-41
PB.11442.5	chr9	+	4672	26	full-splice_match	RIC1	ENST00000414202.6	6774	26	-12	2114	-12	145	multi-exon	FALSE	canonical	1	105231	junction_7	33245.95987258603	NA	1	NA	TRUE	NA	NA	NA	C	coding	1423	4272	204	4475	50.0	0	True	TATAAA	-12
PB.11827.3	chr9	+	1808	8	full-splice_match	SET	ENST00000372692.8	2850	8	177	865	177	641	multi-exon	FALSE	canonical	1	178448	junction_4	460099.40564169036	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	65	937	15.0	3	True	AATAAA	-21
PB.8212.4	chr3	-	6342	7	novel_in_catalog	PSMD6	novel	1430	8	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	1236044	junction_5	235932.13882556473	NA	3	NA	TRUE	NA	NA	NA	C	coding	291	876	66	941	25.0	-13	True	AATAAA	-21
PB.11827.1	chr9	+	2787	9	novel_not_in_catalog	SET	novel	235	2	NA	NA	21	5	any annotated donor/acceptor	FALSE	canonical	1	2596	junction_1	518821.3614839981	NA	3	1	TRUE	NA	NA	NA	C	coding	290	873	186	1058	10.0	-6529	False	AATAAA	-21
PB.11827.7	chr9	+	2582	8	full-splice_match	SET	ENST00000322030.12	2915	8	340	-7	340	-5	multi-exon	FALSE	canonical	1	178448	junction_4	712125.1037060032	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	18	851	10.0	-5194	False	AATAAA	-23
PB.2534.3	chr12	+	4496	4	incomplete-splice_match	KIAA1551	ENST00000312561.8	6230	6	-6	8076	5	2052	3prime_fragment	FALSE	canonical	1	206665	junction_2	29064.48707042095	NA	0	NA	TRUE	NA	NA	NA	C	coding	1358	4074	421	4494	65.0	-2	True	AATAAA	-45
PB.8212.5	chr3	-	2110	7	full-splice_match	PSMD6	ENST00000476464.5	2052	7	-56	-2	-15	1	multi-exon	FALSE	canonical	1	1236044	junction_6	224652.28527363497	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	973	1995	20.0	-22	True	AATAAA	-20
PB.5978.1	chr19	-	1183	10	full-splice_match	ECH1	ENST00000221418.8	1411	10	214	14	-2	-14	multi-exon	FALSE	canonical	1	2160686	junction_5	416181.5013172338	NA	0	NA	TRUE	NA	NA	NA	A	coding	328	987	20	1006	45.0	-3	True	NA	NA
PB.2534.2	chr12	+	2192	4	incomplete-splice_match	KIAA1551	ENST00000312561.8	6230	6	-54	10428	-5	-300	3prime_fragment	FALSE	canonical	1	206665	junction_2	29064.48707042095	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1722	469	2190	70.0	-3138	False	TATAAA	-3
PB.3693.1	chr14	+	1737	13	full-splice_match	ADSSL1	ENST00000330877.6	1766	13	26	3	26	-1	multi-exon	FALSE	canonical	1	152293	junction_9	33396.873593696364	NA	0	NA	TRUE	NA	NA	NA	A	coding	457	1374	60	1433	30.0	-17	False	AATAAA	-18
PB.6440.3	chr2	-	6327	38	full-splice_match	THADA	ENST00000405006.8	6310	38	-17	0	16	0	multi-exon	FALSE	canonical	1	12652	junction_37	36079.23670212599	NA	1	NA	TRUE	NA	NA	NA	C	coding	1953	5862	370	6231	15.0	46	True	CATAAA	-18
PB.11442.1	chr9	+	6784	26	full-splice_match	RIC1	ENST00000414202.6	6774	26	-13	3	-13	2	multi-exon	FALSE	canonical	1	105231	junction_7	33245.95987258603	NA	1	NA	TRUE	NA	NA	NA	C	coding	1423	4272	205	4476	30.0	-1	True	AATAAA	-11
PB.8985.1	chr4	+	1835	6	full-splice_match	C4orf33	ENST00000281146.9	6170	6	382	3953	-1	0	multi-exon	FALSE	canonical	1	44659	junction_1	25731.175343539984	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	340	939	25.0	-37	True	ATTAAA	-20
PB.164.5	chr1	+	4800	11	novel_not_in_catalog	ELOA	novel	5154	11	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	3264	junction_5	155371.47343347812	NA	2	NA	TRUE	NA	NA	NA	C	coding	540	1623	32	1654	65.0	2	True	NA	NA
PB.6440.5	chr2	-	6105	36	novel_in_catalog	THADA	novel	6114	38	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	6408	junction_10	42316.01473226448	NA	1	NA	TRUE	NA	NA	NA	C	coding	1879	5640	370	6009	15.0	46	True	CATAAA	-18
PB.11442.3	chr9	+	5470	26	full-splice_match	RIC1	ENST00000414202.6	6774	26	-15	1319	-15	0	multi-exon	TRUE	canonical	1	105231	junction_7	33245.95987258603	NA	2	NA	TRUE	NA	NA	NA	C	coding	1423	4272	207	4478	35.0	-3	True	AATAAA	-16
PB.164.1	chr1	+	2702	11	novel_not_in_catalog	ELOA	novel	5154	11	NA	NA	-36	12	any annotated donor/acceptor	FALSE	canonical	1	3264	junction_5	155371.47343347812	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	69	1691	10.0	-35	False	AATAAA	-27
PB.164.3	chr1	+	4635	11	full-splice_match	ELOA	ENST00000613537.4	4924	11	89	200	-17	-200	multi-exon	FALSE	canonical	1	227724	junction_1	87945.12800013427	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	50	2368	20.0	0	True	NA	NA
PB.6440.4	chr2	-	6097	38	full-splice_match	THADA	ENST00000405975.6	6114	38	1	16	1	0	multi-exon	FALSE	canonical	1	67415	junction_37	31487.064067849456	NA	1	1	TRUE	NA	NA	NA	C	coding	1953	5862	140	6001	15.0	-8	True	CATAAA	-18
PB.4721.2	chr17	+	2293	4	full-splice_match	SLC16A13	ENST00000308027.6	1748	4	-57	-488	-57	488	multi-exon	FALSE	canonical	1	47501	junction_1	19015.92532589461	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	366	1646	10.0	3	True	NA	NA
PB.4721.1	chr17	+	2399	4	full-splice_match	SLC16A13	ENST00000308027.6	1748	4	-60	-591	-60	591	multi-exon	FALSE	canonical	1	47501	junction_1	19015.92532589461	NA	3	NA	TRUE	NA	NA	NA	C	coding	426	1281	369	1649	30.0	0	True	GATAAA	-35
PB.232.3	chr1	+	5656	17	novel_in_catalog	EPB41	novel	5968	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	21745	junction_14	225632.48530124125	NA	4	NA	TRUE	NA	NA	NA	C	coding	567	1704	745	2448	75.0	-19	True	NA	NA
PB.6440.6	chr2	-	5978	38	novel_not_in_catalog	THADA	novel	6114	38	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	15249	junction_29	37362.30127478559	NA	2	NA	TRUE	NA	NA	NA	C	coding	1913	5742	141	5882	15.0	-9	True	CATAAA	-18
PB.11442.8	chr9	+	6232	27	novel_not_in_catalog	RIC1	novel	4127	22	NA	NA	-12	1777	any annotated donor/acceptor	FALSE	canonical	1	8807	junction_26	45873.491657079365	NA	2	NA	TRUE	NA	NA	NA	C	coding	1423	4272	204	4475	40.0	0	True	NA	NA
PB.914.1	chr1	-	2074	6	novel_not_in_catalog	GPR161	novel	7655	5	NA	NA	-218	0	any annotated donor/acceptor	FALSE	canonical	1	10677	junction_5	32663.679808619236	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	232	1821	90.0	4	True	NA	NA
PB.11442.9	chr9	+	6136	24	novel_in_catalog	RIC1	novel	4127	22	NA	NA	-12	-495	no_combination_of_known_junctions	FALSE	canonical	1	1575	junction_12	49589.434343025605	NA	1	NA	TRUE	NA	NA	NA	C	coding	1373	4122	204	4325	25.0	0	True	AATAAA	-16
PB.1962.1	chr11	-	1082	4	full-splice_match	MRPL16	ENST00000300151.4	1182	4	96	4	-3	-4	multi-exon	FALSE	canonical	1	537266	junction_3	190944.654739418	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	119	874	25.0	-1	True	AATAAA	-22
PB.11672.2	chr9	+	2673	9	novel_in_catalog	TMOD1	novel	3259	10	NA	NA	7	-1	no_combination_of_known_junctions	FALSE	canonical	1	660	junction_1	98226.75268026209	NA	3	1	TRUE	NA	NA	NA	C	coding	223	672	447	1118	10.0	-20	True	ATTAAA	-16
PB.1962.3	chr11	-	1801	3	incomplete-splice_match	MRPL16	ENST00000300151.4	1182	4	58	6	-41	-6	intron_retention	FALSE	canonical	1	748170	junction_2	128042.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	1152	1595	30.0	5109	False	AATAAA	-20
PB.1962.2	chr11	-	3101	3	novel_in_catalog	MRPL16	novel	1182	4	NA	NA	-19	-6	intron_retention	FALSE	canonical	1	537266	junction_2	233494.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	2218	2895	30.0	-17	True	AATAAA	-20
PB.1962.4	chr11	-	4614	1	novel_in_catalog	MRPL16	novel	1182	4	NA	NA	16	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	147	444	3968	4411	30.0	18	True	AATAAA	-17
PB.11672.4	chr9	+	1740	10	full-splice_match	TMOD1	ENST00000259365.8	3343	10	20	1583	20	-1089	multi-exon	FALSE	canonical	1	113506	junction_1	61652.77955345295	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	194	1273	30.0	-7	True	AATAAA	-27
PB.914.2	chr1	-	1930	6	full-splice_match	GPR161	ENST00000271357.9	7806	6	141	5735	141	0	multi-exon	FALSE	canonical	1	2691	junction_5	35677.59648070481	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	88	1677	90.0	1	True	NA	NA
PB.7906.2	chr3	+	2844	10	full-splice_match	ITPR1	ENST00000467056.6	2845	10	-1	2	1	-2	multi-exon	FALSE	canonical	1	126871	junction_2	17330.423736564808	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	350	1240	30.0	1	True	NA	NA
PB.7166.3	chr20	+	3223	19	full-splice_match	MCM8	ENST00000610722.4	7486	19	20	4243	20	-472	multi-exon	FALSE	canonical	1	91435	junction_1	50542.899235314064	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	358	2880	90.0	15	True	NA	NA
PB.7166.2	chr20	+	3277	19	full-splice_match	MCM8	ENST00000378896.7	3769	19	20	472	20	-472	multi-exon	FALSE	canonical	1	96933	junction_1	49926.958423973076	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	412	2934	90.0	15	True	NA	NA
PB.7166.1	chr20	+	3066	19	full-splice_match	MCM8	ENST00000610722.4	7486	19	15	4405	15	-634	multi-exon	FALSE	canonical	1	91435	junction_1	50542.899235314064	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	363	2885	65.0	10	True	NA	NA
PB.3727.1	chr15	+	2674	9	novel_not_in_catalog	AC242376.2	novel	883	6	NA	NA	-5892	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	85	258	136	393	15.0	NA	False	AATAAA	-16
PB.3727.2	chr15	+	2496	9	novel_not_in_catalog	AC242376.2	novel	883	6	NA	NA	-5892	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	122	369	136	504	15.0	NA	False	AATAAA	-15
PB.3727.3	chr15	+	3563	7	novel_not_in_catalog	AC242376.2	novel	883	6	NA	NA	-5891	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	138	417	1575	1991	15.0	NA	False	AATAAA	-16
PB.3727.4	chr15	+	3050	8	novel_not_in_catalog	AC242376.2	novel	883	6	NA	NA	-5883	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	138	417	1062	1478	15.0	NA	False	AATAAA	-16
PB.4251.12	chr16	-	2279	11	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	21	-4	no_combination_of_known_junctions	FALSE	canonical	1	16629	junction_4	199365.02109086237	NA	3	NA	TRUE	NA	NA	NA	C	coding	248	747	1425	2171	40.0	39	True	AATAAA	-20
PB.4251.11	chr16	-	2557	8	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	18	-4	no_combination_of_known_junctions	TRUE	canonical	1	3375	junction_7	256092.13350555807	NA	1	NA	TRUE	NA	NA	NA	C	coding	506	1521	929	2449	40.0	-4	True	AATAAA	-20
PB.4251.10	chr16	-	2696	9	novel_in_catalog	TXNDC11	novel	3140	12	NA	NA	-8	-4	no_combination_of_known_junctions	FALSE	canonical	1	3375	junction_8	216056.08020705526	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	165	2588	40.0	813	False	AATAAA	-20
PB.7665.3	chr22	+	2283	16	novel_in_catalog	SNRPD3	novel	715	7	NA	NA	51613	19024	no_combination_of_known_junctions	FALSE	canonical	1	1618	junction_15	88069.44010783007	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	409	2118	10.0	-2	True	NA	NA
PB.7665.2	chr22	+	2454	16	novel_in_catalog	SNRPD3	novel	715	7	NA	NA	51544	19021	intron_retention	FALSE	canonical	1	1618	junction_15	92678.01629527181	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	583	2292	15.0	-95	False	NA	NA
PB.7665.1	chr22	+	2443	16	novel_in_catalog	SNRPD3	novel	715	7	NA	NA	47150	19021	intron_retention	FALSE	canonical	1	1103	junction_2	92046.83802330685	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	572	2281	15.0	-19	True	NA	NA
PB.10367.8	chr7	-	2399	4	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	9080	junction_2	48676.97464122254	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1082	1570	20.0	17	True	CATAAA	-16
PB.7665.4	chr22	+	2497	16	novel_not_in_catalog	SNRPD3	novel	715	7	NA	NA	51622	19020	intron_retention	FALSE	canonical	1	1135	junction_3	91707.47088394102	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	627	2336	10.0	7	True	NA	NA
PB.10367.3	chr7	-	1580	3	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	-7	24	any annotated donor/acceptor	FALSE	canonical	1	32395	junction_1	45945.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-17
PB.10367.2	chr7	-	1702	3	full-splice_match	MRM2	ENST00000242257.12	1601	3	-7	-94	-7	34	multi-exon	FALSE	canonical	1	124286	junction_2	79017.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	37	777	20.0	-1	True	AATAAA	-27
PB.10367.1	chr7	-	2626	4	full-splice_match	MRM2	ENST00000486040.1	2511	4	-16	-99	-7	35	multi-exon	FALSE	canonical	1	87636	junction_2	16109.655013893584	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1212	1700	20.0	-1	True	AATAAA	-28
PB.10367.7	chr7	-	2498	4	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	34747	junction_3	26367.359674837036	NA	1	1	TRUE	NA	NA	NA	C	coding	162	489	1181	1669	20.0	-1	True	CATAAA	-16
PB.10367.6	chr7	-	2703	4	novel_in_catalog	MRM2	novel	1819	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	26239	junction_3	30364.67799196223	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	1386	1874	20.0	12	True	CATAAA	-16
PB.10367.5	chr7	-	1464	3	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	32395	junction_1	1176.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	CATAAA	-16
PB.10367.4	chr7	-	1599	3	novel_not_in_catalog	MRM2	novel	1819	3	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	141160.5	NA	1	1	TRUE	NA	NA	NA	C	coding	92	279	491	769	15.0	-12	True	CATAAA	-17
PB.5827.1	chr19	+	615	5	full-splice_match	RPL18A	ENST00000222247.9	665	5	45	5	0	-4	multi-exon	TRUE	canonical	1	6489	junction_3	1080630.9948592535	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	37	567	5.0	11	False	AATAAA	-14
PB.8874.8	chr4	-	2898	7	full-splice_match	PPM1K	ENST00000608933.5	6484	7	175	3411	0	840	multi-exon	FALSE	canonical	1	105597	junction_6	56982.30314877496	NA	1	NA	TRUE	NA	NA	NA	C	coding	372	1119	216	1334	25.0	-1	True	ATTAAA	-17
PB.7860.11	chr22	+	1834	12	novel_in_catalog	ATXN10	novel	3135	11	NA	NA	83	189	combination_of_known_junctions	FALSE	canonical	1	2284	junction_1	469053.40528380196	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	659	1519	25.0	234	False	AATAAA	-34
PB.5827.2	chr19	+	3394	1	novel_in_catalog	RPL18A	novel	665	5	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	557	922	5.0	11	False	AATAAA	-17
PB.8459.3	chr3	+	3358	16	full-splice_match	HPS3	ENST00000460120.5	2745	16	-14	-599	-14	-1	multi-exon	FALSE	canonical	1	13097	junction_1	68915.5748709648	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	101	2620	25.0	-28	True	AATAAA	-23
PB.8139.1	chr3	-	2591	5	full-splice_match	C3orf18	ENST00000426034.5	2486	5	-112	7	-26	0	multi-exon	FALSE	canonical	1	21555	junction_4	28477.289416305055	NA	0	NA	TRUE	NA	NA	NA	A	coding	162	489	478	966	25.0	-31	True	ATTAAA	-19
PB.7091.3	chr2	+	3826	10	full-splice_match	UBE2F	ENST00000272930.8	2009	10	57	-1874	-2	1687	multi-exon	FALSE	canonical	1	130839	junction_5	119002.11511544917	NA	2	NA	TRUE	NA	NA	NA	C	coding	185	558	138	695	75.0	-2	True	NA	NA
PB.5827.4	chr19	+	1931	4	full-splice_match	RPL18A	ENST00000599870.1	1084	4	-840	-7	2	-4	multi-exon	FALSE	canonical	1	6489	junction_2	1181724.9544233587	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	1440	1883	5.0	13	False	AATAAA	-14
PB.9666.2	chr5	-	3186	13	novel_in_catalog	HNRNPH1	novel	2279	14	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1151959	junction_9	1038308.0623360561	NA	7	1	TRUE	NA	NA	NA	C	coding	286	861	1545	2405	5.0	-4	True	AATAAA	-20
PB.9666.3	chr5	-	2150	13	novel_in_catalog	HNRNPH1	novel	2279	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	458306	junction_1	1151966.38297602	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	70	1488	5.0	-4	True	AATAAA	-20
PB.12254.35	chrX	+	1959	14	incomplete-splice_match	STAG2	ENST00000371144.7	4281	34	104135	19	-28039	-19	5prime_fragment	FALSE	canonical	1	507937	junction_5	140166.04402606632	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	150	1673	95.0	-298	False	NA	NA
PB.9666.6	chr5	-	2059	13	novel_in_catalog	HNRNPH1	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	321269	junction_9	1192733.795916581	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	619	1278	5.0	-2	True	AATAAA	-20
PB.9666.7	chr5	-	2229	14	full-splice_match	HNRNPH1	ENST00000442819.6	2248	14	18	1	4	0	multi-exon	FALSE	canonical	1	1091551	junction_13	1048742.8546154592	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	100	1449	5.0	893	False	AATAAA	-19
PB.9666.4	chr5	-	2195	14	novel_in_catalog	HNRNPH1	novel	2279	14	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	1	301367	junction_3	1162056.1549137728	NA	2	NA	TRUE	NA	NA	NA	C	coding	439	1320	95	1414	5.0	939	False	AATAAA	-20
PB.9666.5	chr5	-	2157	13	novel_in_catalog	HNRNPH1	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	301367	junction_2	1193993.7892462353	NA	2	1	TRUE	NA	NA	NA	C	coding	462	1389	107	1495	5.0	0	True	AATAAA	-20
PB.2869.2	chr12	-	3003	13	full-splice_match	CRY1	ENST00000008527.9	3267	13	261	3	-55	0	multi-exon	FALSE	canonical	1	152380	junction_11	38891.1252389818	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	608	2368	20.0	-3	True	ATTAAA	-16
PB.2869.3	chr12	-	3051	12	novel_in_catalog	CRY1	novel	3267	13	NA	NA	-36	-7	intron_retention	FALSE	canonical	1	152380	junction_10	36294.089756318026	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	589	2487	40.0	-1	True	ATTAAA	-9
PB.9666.8	chr5	-	2005	14	novel_not_in_catalog	HNRNPH1	novel	2279	14	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	50271	junction_1	1190886.9735912993	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	66	1415	30.0	0	True	AATAAA	-11
PB.2869.1	chr12	-	3792	12	novel_in_catalog	CRY1	novel	3267	13	NA	NA	-59	0	intron_retention	FALSE	canonical	1	152380	junction_10	40124.52142337084	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	612	2372	20.0	-7	True	ATTAAA	-16
PB.8555.1	chr3	-	5836	30	full-splice_match	ABCC5	ENST00000334444.10	5921	30	82	3	6	1	multi-exon	TRUE	canonical	1	72288	junction_25	45872.92904176048	NA	2	NA	TRUE	NA	NA	NA	C	coding	1437	4314	160	4473	35.0	9872	False	AATAAA	-19
PB.3969.14	chr15	+	3039	8	full-splice_match	PML	ENST00000569477.5	2251	8	14	-802	1	-1	multi-exon	FALSE	canonical	1	18781	junction_7	134419.0493703651	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	69	1994	20.0	29	True	NA	NA
PB.3969.15	chr15	+	2996	8	full-splice_match	PML	ENST00000268059.10	3029	8	32	1	5	0	multi-exon	FALSE	canonical	1	126287	junction_7	108978.20571854105	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	65	2554	20.0	33	True	NA	NA
PB.3969.12	chr15	+	3350	5	novel_not_in_catalog	PML	novel	2199	8	NA	NA	1	-238	any annotated donor/acceptor	FALSE	canonical	1	2685	junction_4	177423.81354401106	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	84	1373	55.0	14	True	AATAAA	-18
PB.3969.13	chr15	+	4630	4	incomplete-splice_match	PML	ENST00000567543.5	1404	5	-10	6334	1	-218	3prime_fragment	FALSE	canonical	1	176646	junction_1	115911.1084476184	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	80	1348	15.0	18	True	AATAAA	-38
PB.1869.9	chr11	+	3521	7	full-splice_match	METTL15	ENST00000303459.10	4068	7	-24	571	-24	514	multi-exon	FALSE	canonical	1	13	junction_3	17022.266931058923	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	132	953	90.0	-26	True	NA	NA
PB.3969.11	chr15	+	3522	6	incomplete-splice_match	PML	ENST00000354026.10	2885	7	4	0	4	0	intron_retention	FALSE	canonical	1	136428	junction_4	121073.40674153015	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	93	1784	15.0	5	True	NA	NA
PB.7150.4	chr20	+	3952	24	novel_in_catalog	ATRN	novel	8633	29	NA	NA	-22	99	no_combination_of_known_junctions	FALSE	canonical	1	1304	junction_23	79480.26810180607	NA	1	NA	TRUE	NA	NA	NA	C	coding	1217	3654	91	3744	85.0	-21	True	NA	NA
PB.1869.6	chr11	+	3243	5	novel_in_catalog	METTL15	novel	4304	7	NA	NA	-9	514	intron_retention	FALSE	canonical	1	39	junction_2	41538.3777307203	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	117	1148	90.0	-11	True	NA	NA
PB.1869.5	chr11	+	3604	7	full-splice_match	METTL15	ENST00000406787.7	4304	7	129	571	23	514	multi-exon	FALSE	canonical	1	13	junction_4	35056.072587356386	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	330	1169	90.0	-11	True	NA	NA
PB.1869.4	chr11	+	3661	7	full-splice_match	METTL15	ENST00000407364.7	4242	7	10	571	10	514	multi-exon	FALSE	canonical	1	13	junction_4	36158.16251054371	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	343	1566	90.0	-24	True	NA	NA
PB.1869.3	chr11	+	4046	7	full-splice_match	METTL15	ENST00000407364.7	4242	7	6	190	6	-190	multi-exon	FALSE	canonical	1	13	junction_4	36158.16251054371	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	347	1570	30.0	-28	True	AATAAA	-18
PB.1869.2	chr11	+	4237	7	full-splice_match	METTL15	ENST00000407364.7	4242	7	5	0	5	0	multi-exon	FALSE	canonical	1	13	junction_4	36158.16251054371	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	348	1571	10.0	-29	True	AATAAA	-16
PB.1869.1	chr11	+	2310	7	novel_not_in_catalog	METTL15	novel	4304	7	NA	NA	4	-845	any annotated donor/acceptor	FALSE	canonical	1	13	junction_4	36685.149565821135	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	351	1574	25.0	-30	True	AATAAA	-13
PB.7150.3	chr20	+	8700	29	full-splice_match	ATRN	ENST00000262919.9	8633	29	-67	0	-67	0	multi-exon	FALSE	canonical	1	114379	junction_25	76019.22406865253	NA	2	NA	TRUE	NA	NA	NA	C	coding	1429	4290	136	4425	5.0	0	True	AATAAA	-22
PB.10532.2	chr7	+	2757	4	incomplete-splice_match	CCM2	ENST00000472223.5	981	7	3	3690	3	2245	3prime_fragment	FALSE	canonical	1	78673	junction_1	262306.1631618035	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	2	574	85.0	4	True	TTTAAA	-40
PB.10532.1	chr7	+	1808	10	full-splice_match	CCM2	ENST00000258781.10	1894	10	62	24	-2	6	multi-exon	FALSE	canonical	1	158800	junction_1	225559.17245720743	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	88	1422	30.0	2	True	AAAAAG	-18
PB.694.5	chr1	+	5995	10	novel_in_catalog	BCL9	novel	6278	10	NA	NA	-65	-5	combination_of_known_junctions	FALSE	canonical	1	32811	junction_5	43490.42691341522	NA	1	NA	TRUE	NA	NA	NA	C	coding	1352	4059	685	4743	30.0	-24	True	AATAAA	-16
PB.262.7	chr1	+	4513	12	full-splice_match	RBBP4	ENST00000373493.9	7943	12	59	3371	-3	2183	multi-exon	FALSE	canonical	1	99065	junction_2	172483.3475357563	NA	4	NA	TRUE	NA	NA	NA	C	coding	425	1278	101	1378	30.0	-3	True	AATAAA	-23
PB.7671.1	chr22	+	2037	1	full-splice_match	Z95115.1	ENST00000566814.1	2032	1	-8	3	-8	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-18	True	AATGAA	-29
PB.7671.2	chr22	+	1660	2	full-splice_match	Z95115.1	ENST00000565764.1	981	2	-26	-653	-8	-3	multi-exon	FALSE	canonical	1	24449	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-18	True	AATGAA	-29
PB.2531.23	chr12	-	2722	6	full-splice_match	SINHCAF	ENST00000337682.8	3163	6	222	219	-22	-219	multi-exon	FALSE	canonical	1	14570	junction_4	43667.472702687985	NA	5	NA	TRUE	NA	NA	NA	C	coding	221	666	148	813	20.0	-1	True	AATATA	-21
PB.2531.22	chr12	-	2859	7	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	-20	-218	any annotated donor/acceptor	FALSE	canonical	1	14570	junction_4	58064.52444670689	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	284	949	20.0	1	True	AATATA	-22
PB.2531.21	chr12	-	2903	6	full-splice_match	SINHCAF	ENST00000337682.8	3163	6	170	90	-3	-90	multi-exon	FALSE	canonical	1	14570	junction_4	43667.472702687985	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	200	865	15.0	-17	True	AATATA	-15
PB.2531.25	chr12	-	1822	2	full-splice_match	SINHCAF	ENST00000536836.1	1734	2	-88	0	-17	0	multi-exon	FALSE	canonical	1	206106	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	18	False	NA	NA
PB.2531.24	chr12	-	2195	6	full-splice_match	SINHCAF	ENST00000337682.8	3163	6	181	787	8	691	multi-exon	FALSE	canonical	1	14570	junction_4	43667.472702687985	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	189	854	45.0	-6	True	ATTAAA	-42
PB.8555.8	chr3	-	4733	5	full-splice_match	ABCC5	ENST00000427120.6	4697	5	-36	0	-10	0	multi-exon	FALSE	canonical	1	180671	junction_4	27731.164914226018	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	126	821	20.0	-16	True	AATAAA	-17
PB.10884.7	chr7	-	3249	15	novel_not_in_catalog	SLC37A3	novel	3488	16	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	56115.29624253761	NA	5	1	TRUE	NA	NA	NA	C	coding	523	1572	169	1740	25.0	0	True	AATAAA	-16
PB.11498.1	chr9	+	2127	9	full-splice_match	DNAJA1	ENST00000330899.4	2381	9	21	233	21	-233	multi-exon	FALSE	canonical	1	679745	junction_3	674895.5038009125	NA	11	NA	TRUE	NA	NA	NA	C	coding	397	1194	163	1356	35.0	-9826	False	ATTAAA	-21
PB.6880.24	chr2	+	5419	27	novel_in_catalog	ITGA4	novel	1846	2	NA	NA	-13	1551	no_combination_of_known_junctions	FALSE	canonical	1	10774	junction_13	116792.60739169492	NA	5	1	TRUE	NA	NA	NA	C	coding	514	1545	1664	3208	60.0	5	True	AATAAA	-8
PB.11498.3	chr9	+	2314	9	full-splice_match	DNAJA1	ENST00000330899.4	2381	9	62	5	-13	-5	multi-exon	FALSE	canonical	1	679745	junction_3	674895.5038009125	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	122	1315	25.0	-2	True	AATATA	-17
PB.11498.2	chr9	+	1949	9	full-splice_match	DNAJA1	ENST00000330899.4	2381	9	30	402	30	-402	multi-exon	FALSE	canonical	1	679745	junction_3	674895.5038009125	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	154	1347	15.0	-9817	False	NA	NA
PB.11498.5	chr9	+	1725	9	full-splice_match	DNAJA1	ENST00000330899.4	2381	9	63	593	-12	588	multi-exon	FALSE	canonical	1	679745	junction_3	674895.5038009125	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	121	1314	20.0	-1	True	AGTAAA	-45
PB.11498.4	chr9	+	2147	8	novel_in_catalog	DNAJA1	novel	2381	9	NA	NA	-13	6	no_combination_of_known_junctions	FALSE	canonical	1	39409	junction_2	906375.1237654623	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	415	1137	15.0	-2	True	AATATA	-28
PB.8101.2	chr3	+	4316	5	novel_not_in_catalog	WDR6	novel	4401	6	NA	NA	50	0	intron_retention	FALSE	canonical	1	30452	junction_3	546498.3305836236	NA	15	1	TRUE	NA	NA	NA	C	coding	861	2586	179	2764	15.0	-169	False	AATAAA	-12
PB.7439.6	chr21	-	3547	1	genic	CU634019.6_CU634019.4	novel	NA	NA	NA	NA	-2	178	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	112	339	149	487	60.0	NA	False	NA	NA
PB.7439.4	chr21	-	1457	2	novel_in_catalog	CU634019.6	novel	710	5	NA	NA	7	339	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.7439.5	chr21	-	5257	4	novel_not_in_catalog	CU638689.4	novel	785	4	NA	NA	4	6940	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	9	NA	TRUE	NA	NA	NA	B	coding	195	588	2581	3168	85.0	NA	False	NA	NA
PB.7439.2	chr21	-	3740	1	genic	CU638689.1_CU638689.4	novel	NA	NA	NA	NA	-9	339	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	112	339	181	519	70.0	NA	False	NA	NA
PB.7439.3	chr21	+	2896	4	novel_not_in_catalog	CU633906.2	novel	2257	4	NA	NA	-4	-10221	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	120	363	448	810	85.0	NA	False	NA	NA
PB.7439.1	chr21	-	3645	2	incomplete-splice_match	CU634019.6	ENST00000624728.1	936	3	-17	-425	-17	425	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	112	339	189	527	5.0	NA	False	ATTAAA	-19
PB.9299.18	chr5	+	2730	16	novel_in_catalog	POLK	novel	5911	15	NA	NA	2	-25	no_combination_of_known_junctions	FALSE	canonical	1	2427	junction_1	63104.58366200949	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	173	2728	75.0	2	True	NA	NA
PB.9299.19	chr5	+	4269	14	novel_in_catalog	POLK	novel	5911	15	NA	NA	4	-21	intron_retention	FALSE	canonical	1	15478	junction_1	63310.86816961629	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	34	1503	30.0	4	True	AATAAA	-16
PB.7556.9	chr21	-	5136	5	novel_in_catalog	UBE2G2	novel	3566	6	NA	NA	-8	495	intron_retention	FALSE	canonical	1	604634	junction_4	184103.78842517064	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	3809	4195	75.0	5093	False	NA	NA
PB.7556.6	chr21	-	2377	6	full-splice_match	UBE2G2	ENST00000345496.6	3566	6	203	986	3	-526	multi-exon	FALSE	canonical	1	532334	junction_2	189494.1339425577	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	69	566	65.0	3	True	NA	NA
PB.5233.1	chr17	-	3287	19	full-splice_match	HID1	ENST00000425042.6	3271	19	-20	4	9	-4	multi-exon	FALSE	canonical	1	163092	junction_18	65104.21693414355	NA	12	1	TRUE	NA	NA	NA	A	coding	788	2367	99	2465	15.0	4	True	AATAAA	-10
PB.7556.4	chr21	-	6167	5	novel_in_catalog	UBE2G2	novel	3566	6	NA	NA	-2	-359	intron_retention	FALSE	canonical	1	604634	junction_4	184103.78842517064	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	3803	4189	100.0	-9	True	NA	NA
PB.7556.5	chr21	-	2534	6	full-splice_match	UBE2G2	ENST00000345496.6	3566	6	213	819	2	-359	multi-exon	FALSE	canonical	1	532334	junction_2	189494.1339425577	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	59	556	100.0	-3	True	NA	NA
PB.7556.2	chr21	-	6519	5	novel_in_catalog	UBE2G2	novel	3566	6	NA	NA	0	-5	intron_retention	FALSE	canonical	1	604634	junction_4	184103.78842517064	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	3801	4187	5.0	-7	True	AATAAA	-20
PB.5124.2	chr17	+	2558	12	incomplete-splice_match	STXBP4	ENST00000376352.6	15590	18	0	125138	0	3718	3prime_fragment	FALSE	canonical	1	47244	junction_1	5435.951364726272	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	208	1410	65.0	0	True	NA	NA
PB.5124.1	chr17	+	6277	18	full-splice_match	STXBP4	ENST00000376352.6	15590	18	-35	9348	3	3358	multi-exon	FALSE	canonical	1	30770	junction_15	10513.593303211264	NA	2	NA	TRUE	NA	NA	NA	C	coding	553	1662	243	1904	15.0	1	True	TTTAAA	-4
PB.7556.1	chr21	-	2824	6	full-splice_match	UBE2G2	ENST00000345496.6	3566	6	199	543	-1	-83	multi-exon	FALSE	canonical	1	532334	junction_2	189494.1339425577	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	73	570	45.0	-1	True	AATAAA	-31
PB.10015.7	chr6	+	4590	10	novel_in_catalog	HSP90AB1	novel	2644	12	NA	NA	12	-1	intron_retention	FALSE	canonical	1	1694090	junction_5	2537531.130485844	NA	2	NA	TRUE	NA	NA	NA	C	coding	717	2154	2153	4306	10.0	-2	True	AATAAA	-20
PB.6880.22	chr2	+	2985	11	novel_not_in_catalog	ITGA4	novel	1846	2	NA	NA	-18	1343	any annotated donor/acceptor	FALSE	canonical	1	1721	junction_10	130451.03060263649	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	330	1448	40.0	0	True	AATAAA	-20
PB.6880.23	chr2	+	3842	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	162	185	-17	-185	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	329	3367	35.0	1	True	AATATA	-22
PB.9557.1	chr5	-	2428	2	full-splice_match	TIGD6	ENST00000515406.2	2429	2	22	-21	21	21	multi-exon	FALSE	canonical	1	16681	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	521	1566	787	2352	40.0	21	True	AATAAA	-36
PB.5155.10	chr17	+	5156	14	novel_in_catalog	RPS6KB1	novel	5479	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	6165	junction_12	96992.82349869252	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	57	1526	50.0	8	True	ATTAAA	-15
PB.7762.1	chr22	+	1534	9	full-splice_match	GCAT	ENST00000248924.10	1497	9	-38	1	-31	-1	multi-exon	TRUE	canonical	1	86501	junction_1	50826.56652882796	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	95	1354	10.0	1	True	NA	NA
PB.10015.3	chr6	+	3010	11	novel_in_catalog	HSP90AB1	novel	2644	12	NA	NA	10	0	intron_retention	FALSE	canonical	1	1694090	junction_6	2992913.524822495	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	1634	2722	10.0	-4	True	AATAAA	-24
PB.7762.3	chr22	+	1541	9	incomplete-splice_match	GCAT	ENST00000323205.10	1656	10	38	280	5	-3	3prime_fragment	FALSE	canonical	1	27384	junction_1	64820.90673299395	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	26	1363	15.0	5	True	NA	NA
PB.7762.2	chr22	+	1545	9	novel_not_in_catalog	GCAT	novel	1656	10	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	12646	junction_7	72819.75683397587	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	67	1368	15.0	-36	True	NA	NA
PB.5296.2	chr17	+	4505	14	novel_not_in_catalog	ENGASE	novel	1381	6	NA	NA	-19	-2	any annotated donor/acceptor	FALSE	canonical	1	15882	junction_2	72656.92180108835	NA	2	2	TRUE	NA	NA	NA	C	coding	369	1110	415	1524	20.0	-19	True	AATAAA	-16
PB.5296.1	chr17	+	2613	14	full-splice_match	ENGASE	ENST00000579016.5	2579	14	-36	2	-30	-2	multi-exon	FALSE	canonical	1	64743	junction_1	53042.97217881112	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2232	37	2268	35.0	-30	True	CATAAA	-22
PB.7193.6	chr20	+	3049	20	full-splice_match	SEC23B	ENST00000650089.1	3026	20	-24	1	-17	-1	multi-exon	FALSE	canonical	1	237497	junction_1	197670.8351379318	NA	2	1	TRUE	NA	NA	NA	C	coding	767	2304	72	2375	15.0	-24	True	AATATA	-18
PB.3329.2	chr14	-	2388	10	full-splice_match	SLC22A17	ENST00000354772.8	2238	10	-163	13	4	-1	multi-exon	FALSE	canonical	1	380863	junction_9	145290.43448805704	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	497	2059	25.0	-20	False	AATAAA	-21
PB.3329.3	chr14	-	2266	10	novel_not_in_catalog	SLC22A17	novel	2238	10	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	247642.44245750966	NA	1	1	TRUE	NA	NA	NA	C	coding	481	1446	492	1937	25.0	-15	True	AATAAA	-21
PB.3329.1	chr14	-	2428	10	full-splice_match	SLC22A17	ENST00000397267.5	2455	10	24	3	-3	-1	multi-exon	TRUE	canonical	1	118654	junction_2	206544.27872761598	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	481	2097	20.0	-4	True	AATAAA	-23
PB.7193.5	chr20	+	2772	20	full-splice_match	SEC23B	ENST00000336714.8	3464	20	398	294	-15	-1	multi-exon	FALSE	canonical	1	304885	junction_1	189067.0767791464	NA	1	1	TRUE	NA	NA	NA	C	coding	767	2304	88	2391	10.0	-22	True	AATACA	-15
PB.7193.4	chr20	+	2671	20	full-splice_match	SEC23B	ENST00000650089.1	3026	20	-44	399	6	-39	multi-exon	FALSE	canonical	1	237497	junction_1	197670.8351379318	NA	3	NA	TRUE	NA	NA	NA	C	coding	767	2304	92	2395	15.0	-44	True	AATAAA	-15
PB.4255.12	chr16	-	2446	16	novel_not_in_catalog	GSPT1	novel	7105	15	NA	NA	-32	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	440401.46321598685	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	195	2003	15.0	-1	True	AATAAA	-19
PB.4255.11	chr16	-	2410	16	novel_not_in_catalog	GSPT1	novel	7105	15	NA	NA	-9	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	440401.46321598685	NA	1	NA	TRUE	NA	NA	NA	C	coding	602	1809	158	1966	15.0	-13	True	AATAAA	-20
PB.7193.2	chr20	+	2720	20	full-splice_match	SEC23B	ENST00000650089.1	3026	20	-19	325	-12	-32	multi-exon	FALSE	canonical	1	237497	junction_1	197670.8351379318	NA	1	1	TRUE	NA	NA	NA	C	coding	767	2304	67	2370	55.0	-19	True	AATAAA	-24
PB.12364.6	chrX	+	1965	12	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	5	-601	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	33029.4939605386	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	93	1043	75.0	1	True	NA	NA
PB.12364.7	chrX	+	4926	1	novel_in_catalog	BRCC3	novel	1101	11	NA	NA	30	-2544	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	85	258	68	325	90.0	-49	False	NA	NA
PB.12364.4	chrX	+	2914	12	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	5	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	33029.4939605386	NA	1	NA	TRUE	NA	NA	NA	B	coding	316	951	93	1043	30.0	1	True	NA	NA
PB.12364.5	chrX	+	2195	8	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	5	-15415	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	33123.97405419309	NA	0	NA	TRUE	NA	NA	NA	B	coding	107	324	93	416	20.0	1	True	NA	NA
PB.12364.2	chrX	+	3094	11	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	4	255	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	43733.422207849224	NA	0	NA	TRUE	NA	NA	NA	B	coding	291	876	94	969	25.0	0	True	AATAAA	-26
PB.12364.3	chrX	+	2837	11	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	43733.422207849224	NA	0	NA	TRUE	NA	NA	NA	B	coding	291	876	94	969	35.0	0	True	NA	NA
PB.12364.1	chrX	+	2089	10	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	-3	-400	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48996.032236432984	NA	3	1	TRUE	NA	NA	NA	B	coding	233	702	265	966	70.0	-7	True	NA	NA
PB.12364.8	chrX	+	2644	9	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	-10	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	34486.44005982641	NA	6	1	TRUE	NA	NA	NA	B	coding	189	570	204	773	30.0	-21	True	NA	NA
PB.12364.9	chrX	+	1825	10	novel_not_in_catalog	BRCC3	novel	1101	11	NA	NA	-8	-601	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48996.032236432984	NA	3	1	TRUE	NA	NA	NA	B	coding	233	702	202	903	75.0	-19	True	NA	NA
PB.791.1	chr1	+	2920	22	full-splice_match	ADAM15	ENST00000359280.8	2874	22	-29	-17	-29	0	multi-exon	TRUE	canonical	1	74857	junction_19	292204.0332289267	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	131	2647	10.0	-1258	False	AATAAA	-21
PB.483.3	chr1	-	6453	15	novel_in_catalog	AC118549.1	novel	4500	11	NA	NA	0	-43	combination_of_known_junctions	FALSE	canonical	1	81174	junction_14	88829.209270903	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	561	3272	25.0	-22	True	AATAAA	-38
PB.8880.1	chr4	-	1965	1	full-splice_match	NAP1L5	ENST00000323061.6	1915	1	-58	8	-58	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	182	549	134	682	70.0	-19	False	AATAAA	-12
PB.3879.6	chr15	-	5117	4	full-splice_match	ARPP19	ENST00000566423.5	5362	4	58	187	-14	12	multi-exon	FALSE	canonical	1	239423	junction_3	154353.61531885155	NA	3	NA	TRUE	NA	NA	NA	C	coding	112	339	77	415	20.0	1	True	AATAAA	-26
PB.3879.4	chr15	-	5276	4	full-splice_match	ARPP19	ENST00000566423.5	5362	4	85	1	0	-1	multi-exon	FALSE	canonical	1	239423	junction_3	154353.61531885155	NA	5	NA	TRUE	NA	NA	NA	C	coding	112	339	50	388	15.0	-9	True	ATTAAA	-16
PB.7168.2	chr20	-	4456	15	novel_not_in_catalog	FERMT1	novel	3322	7	NA	NA	-38	-222	any annotated donor/acceptor	FALSE	canonical	1	27925	junction_14	27327.53410995241	NA	1	NA	TRUE	NA	NA	NA	B	coding	677	2034	317	2350	90.0	-39	True	AATAAA	-9
PB.9547.2	chr5	-	5614	14	full-splice_match	DPYSL3	ENST00000343218.9	5476	14	-137	-1	-137	0	multi-exon	FALSE	canonical	1	183389	junction_13	174360.5275268568	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	336	2390	20.0	1248	False	ATTAAA	-17
PB.9547.3	chr5	-	2800	14	full-splice_match	DPYSL3	ENST00000343218.9	5476	14	114	2562	114	451	multi-exon	FALSE	canonical	1	183389	junction_13	174360.5275268568	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	85	2139	20.0	-1	True	ATTAAA	-13
PB.9547.1	chr5	-	5095	14	full-splice_match	DPYSL3	ENST00000398514.7	5309	14	215	-1	-56	1	multi-exon	FALSE	canonical	1	279801	junction_13	156096.51293524905	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	158	1870	20.0	608	False	ATTAAA	-18
PB.1528.2	chr10	-	2757	10	full-splice_match	LIPA	ENST00000336233.9	2782	10	19	6	0	0	multi-exon	FALSE	canonical	1	453005	junction_9	132453.3662540318	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	305	1504	30.0	3280	False	AATAAA	-23
PB.509.1	chr1	-	2801	3	full-splice_match	BCL10	ENST00000620248.2	776	3	-175	-1850	1	2	multi-exon	FALSE	canonical	1	15113	junction_1	114167.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	222	669	280	948	10.0	-87	True	AATAAA	-20
PB.11201.9	chr8	-	2084	5	full-splice_match	HEY1	ENST00000337919.9	2296	5	191	21	94	-21	multi-exon	FALSE	canonical	1	26178	junction_2	76868.23108736145	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	4	930	80.0	1013	False	NA	NA
PB.2034.2	chr11	-	6404	40	novel_not_in_catalog	ATG2A	novel	5654	37	NA	NA	2	-1	intron_retention	FALSE	canonical	1	32046	junction_13	47681.12046765076	NA	0	NA	TRUE	NA	NA	NA	C	coding	1967	5904	75	5978	15.0	-1	True	AATAAA	-13
PB.8037.5	chr3	+	2537	5	full-splice_match	ZNF621	ENST00000339296.9	6378	5	75	3766	-23	-141	multi-exon	FALSE	canonical	1	69020	junction_2	17403.950054513487	NA	3	NA	TRUE	NA	NA	NA	C	coding	439	1320	378	1697	65.0	0	True	AATAAA	-5
PB.8018.4	chr3	+	2777	4	novel_in_catalog	MYD88	novel	2712	4	NA	NA	-13	-98	intron_retention	FALSE	canonical	1	297694	junction_1	157406.8979541734	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	64	747	50.0	-23	True	ATTAAA	-9
PB.8018.5	chr3	+	4099	2	full-splice_match	MYD88	ENST00000484513.1	3314	2	-785	0	-13	0	multi-exon	FALSE	canonical	1	655194	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	64	549	20.0	-23	True	AATAAA	-17
PB.8018.6	chr3	+	2547	4	full-splice_match	MYD88	ENST00000417037.7	2712	4	166	-1	-7	1	multi-exon	FALSE	canonical	1	15970	junction_1	263013.95348198205	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	58	813	15.0	-17	True	AATAAA	-18
PB.8018.7	chr3	+	2500	4	full-splice_match	MYD88	ENST00000443433.6	914	4	-17	-1569	-7	0	multi-exon	TRUE	canonical	1	5973	junction_2	265496.4529334097	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	19	633	20.0	-17	True	AATAAA	-17
PB.8018.1	chr3	+	2557	5	full-splice_match	MYD88	ENST00000396334.8	2850	5	290	3	106	0	multi-exon	FALSE	canonical	1	297694	junction_1	136920.30930070236	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	12	824	20.0	-983	False	AATAAA	-17
PB.4412.8	chr16	-	2115	18	novel_in_catalog	ITFG1	novel	2636	10	NA	NA	14	-80	combination_of_known_junctions	FALSE	canonical	1	2841	junction_17	168966.08394688572	NA	2	NA	TRUE	NA	NA	NA	C	coding	499	1500	278	1777	20.0	4	True	AATAAA	-16
PB.4412.9	chr16	-	2231	18	full-splice_match	ITFG1	ENST00000320640.10	3400	18	-5	1174	-5	-4	multi-exon	FALSE	canonical	1	462161	junction_11	94959.91081937436	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	235	2073	30.0	-15	False	AATAAA	-18
PB.4412.6	chr16	-	2179	18	novel_not_in_catalog	ITFG1	novel	2636	10	NA	NA	175	-78	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	211131.26245607866	NA	26	3	TRUE	NA	NA	NA	C	coding	494	1485	55	1539	20.0	-44	True	AATAAA	-18
PB.4412.7	chr16	-	2099	18	novel_in_catalog	ITFG1	novel	2636	10	NA	NA	69	-79	combination_of_known_junctions	FALSE	canonical	1	1539	junction_17	169219.76831798258	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	261	1760	15.0	-2816	False	AATAAA	-17
PB.4412.4	chr16	-	2176	18	full-splice_match	ITFG1	ENST00000320640.10	3400	18	208	1016	208	-102	multi-exon	FALSE	canonical	1	462161	junction_11	94959.91081937436	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	22	1860	70.0	-11	True	AAAAAG	-7
PB.4412.5	chr16	-	2338	19	novel_not_in_catalog	ITFG1	novel	2636	10	NA	NA	182	-77	any annotated donor/acceptor	FALSE	canonical	1	4887	junction_12	207702.19052447827	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	48	1997	20.0	-37	True	AATAAA	-19
PB.4412.2	chr16	-	3149	18	novel_in_catalog	ITFG1	novel	2636	10	NA	NA	181	-7	combination_of_known_junctions	FALSE	canonical	1	9778	junction_4	167620.50943381366	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	49	1824	45.0	-38	True	AATAAA	-13
PB.4412.3	chr16	-	2266	18	novel_not_in_catalog	ITFG1	novel	2636	10	NA	NA	182	-59	any annotated donor/acceptor	FALSE	canonical	1	334	junction_9	166765.97340709294	NA	4	NA	TRUE	NA	NA	NA	C	coding	619	1860	48	1907	10.0	-37	True	AATAAA	-37
PB.4412.1	chr16	-	3186	18	full-splice_match	ITFG1	ENST00000320640.10	3400	18	207	7	207	-7	multi-exon	TRUE	canonical	1	462161	junction_11	94959.91081937436	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	23	1861	45.0	-12	True	AATAAA	-13
PB.9913.5	chr6	-	1859	4	incomplete-splice_match	HLA-DPA1	ENST00000419277.5	1704	6	7053	3092	-24	-1	internal_fragment	FALSE	canonical	1	3135941	junction_1	410629.43575794576	NA	0	NA	TRUE	NA	NA	NA	B	coding	260	783	88	870	15.0	-21	True	NA	NA
PB.9913.4	chr6	-	3540	4	incomplete-splice_match	HLA-DPA1	ENST00000419277.5	1704	6	7053	1411	-24	-973	internal_fragment	FALSE	canonical	1	3135941	junction_1	410629.43575794576	NA	12	NA	TRUE	NA	NA	NA	B	coding	260	783	88	870	50.0	-21	True	NA	NA
PB.9913.6	chr6	-	2795	1	novel_in_catalog	HLA-DPA1	novel	1704	6	NA	NA	-17	-1694	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-14	True	NA	NA
PB.2411.3	chr12	+	2739	6	incomplete-splice_match	TAPBPL	ENST00000266556.7	1741	7	94	3	-53	-3	intron_retention	FALSE	canonical	1	171390	junction_1	67148.25442437055	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	72	1415	30.0	6	True	AATACA	-36
PB.2411.2	chr12	+	1732	7	full-splice_match	TAPBPL	ENST00000266556.7	1741	7	9	0	9	0	multi-exon	FALSE	canonical	1	171390	junction_1	63410.595238274036	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	157	1563	25.0	1	True	AATACA	-39
PB.2411.1	chr12	+	2738	7	novel_in_catalog	TAPBPL	novel	1611	7	NA	NA	-4	1	intron_retention	FALSE	canonical	1	28215	junction_4	100300.70118634378	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	212	1000	25.0	-54	True	AATACA	-20
PB.9913.2	chr6	-	1207	5	incomplete-splice_match	HLA-DPA1	ENST00000419277.5	1704	6	7061	446	-16	-8	5prime_fragment	FALSE	canonical	1	3135941	junction_2	416071.77906364604	NA	1	NA	TRUE	NA	NA	NA	B	coding	260	783	80	862	25.0	-13	True	AATAAA	-17
PB.7566.4	chr21	-	5001	8	novel_in_catalog	POFUT2	novel	3176	9	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	161336	junction_7	61169.79215966933	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	2488	3456	20.0	4	True	AATAAA	-12
PB.7566.3	chr21	-	4438	9	novel_not_in_catalog	POFUT2	novel	3176	9	NA	NA	-3	-8	any annotated donor/acceptor	FALSE	canonical	1	10446	junction_3	92862.4375655161	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	17	856	20.0	4	True	AATAAA	-12
PB.7566.2	chr21	-	2861	9	full-splice_match	POFUT2	ENST00000349485.9	2871	9	7	3	0	-2	multi-exon	FALSE	canonical	1	161336	junction_8	57250.188835933106	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	21	1310	20.0	0	True	AATAAA	-18
PB.7566.1	chr21	-	2718	9	novel_in_catalog	POFUT2	novel	3176	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	224	junction_6	109767.98502067896	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	386	1165	25.0	-1	True	AATAAA	-20
PB.11498.6	chr9	+	1444	9	full-splice_match	DNAJA1	ENST00000330899.4	2381	9	65	872	-10	309	multi-exon	FALSE	canonical	1	679745	junction_3	674895.5038009125	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	119	1312	65.0	1	True	AATAAA	-24
PB.6642.1	chr2	-	2630	16	novel_in_catalog	FAM178B	novel	1004	5	NA	NA	-28	0	no_combination_of_known_junctions	TRUE	canonical	1	781	junction_12	53929.17352206812	NA	4	NA	TRUE	NA	NA	NA	C	coding	617	1854	386	2239	25.0	-28	False	ATTAAA	-15
PB.6642.3	chr2	-	2010	9	novel_not_in_catalog	FAM178B	novel	2710	17	NA	NA	12	-18455	any annotated donor/acceptor	FALSE	canonical	1	35	junction_1	1258.3856659923458	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	268	1434	20.0	-1	True	NA	NA
PB.6642.2	chr2	-	2697	17	full-splice_match	FAM178B	ENST00000490605.2	2710	17	12	1	12	-1	multi-exon	FALSE	canonical	1	1746	junction_16	52661.49574044677	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	268	2307	30.0	-1	True	ATTAAA	-14
PB.4529.1	chr16	-	4372	7	full-splice_match	ST3GAL2	ENST00000342907.2	4450	7	-7	85	-7	-85	multi-exon	FALSE	canonical	1	57949	junction_6	100965.69810364091	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1151	2203	40.0	-33	True	ATTAAA	-5
PB.4529.3	chr16	-	4152	8	novel_not_in_catalog	ST3GAL2	novel	8872	6	NA	NA	14	-377	any annotated donor/acceptor	FALSE	canonical	1	1739	junction_7	142393.00450399052	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1223	2275	90.0	-12	True	NA	NA
PB.4529.4	chr16	-	4048	7	full-splice_match	ST3GAL2	ENST00000342907.2	4450	7	25	377	25	-377	multi-exon	FALSE	canonical	1	57949	junction_6	100965.69810364091	NA	4	NA	TRUE	NA	NA	NA	C	coding	350	1053	1119	2171	90.0	-1	True	NA	NA
PB.4529.7	chr16	-	2452	7	full-splice_match	ST3GAL2	ENST00000342907.2	4450	7	-23	2021	-23	118	multi-exon	FALSE	canonical	1	57949	junction_6	100965.69810364091	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1167	2219	20.0	-49	True	NA	NA
PB.4529.6	chr16	-	3677	7	full-splice_match	ST3GAL2	ENST00000342907.2	4450	7	3	770	3	-770	multi-exon	FALSE	canonical	1	57949	junction_6	100965.69810364091	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1141	2193	10.0	-23	True	AATATA	-12
PB.5928.9	chr19	+	3517	4	incomplete-splice_match	MAG	ENST00000537831.2	2341	11	17755	-2559	110	2559	5prime_fragment	FALSE	canonical	1	171047	junction_3	2866.1733296427756	NA	1	NA	TRUE	NA	NA	NA	B	coding	117	354	255	608	15.0	-12	True	NA	NA
PB.791.5	chr1	+	2950	23	full-splice_match	ADAM15	ENST00000356955.6	2949	23	16	-17	-1	0	multi-exon	FALSE	canonical	1	130110	junction_19	312093.30701992015	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	86	2677	10.0	-14	True	AATAAA	-21
PB.11109.6	chr8	-	2483	14	novel_not_in_catalog	PLAT	novel	2599	15	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	136	junction_10	179130.4379634635	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	99	1727	40.0	-1	True	AATAAA	-28
PB.11228.1	chr8	-	4656	3	full-splice_match	TMEM64	ENST00000458549.6	4997	3	342	-1	164	1	multi-exon	FALSE	canonical	1	289278	junction_1	3457.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	419	979	0.0	-29	True	AATAAA	-20
PB.11109.4	chr8	-	2608	15	novel_not_in_catalog	PLAT	novel	2599	15	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	1679	junction_1	226120.19359205215	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	101	1852	40.0	-3	True	AATAAA	-28
PB.11109.5	chr8	-	2595	15	full-splice_match	PLAT	ENST00000429089.6	2599	15	0	4	0	0	multi-exon	FALSE	canonical	1	2036	junction_14	224230.10060226536	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	151	1839	40.0	-1	True	AATAAA	-28
PB.11109.3	chr8	-	2516	13	full-splice_match	PLAT	ENST00000352041.7	2516	13	0	0	0	0	multi-exon	FALSE	canonical	1	18709	junction_10	181324.26649213207	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	210	1760	40.0	-1	True	AATAAA	-28
PB.12168.1	chrX	+	2660	1	novel_in_catalog	APOOL	novel	1279	9	NA	NA	6	-81506	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	17	True	NA	NA
PB.9825.5	chr6	-	4412	6	novel_not_in_catalog	ZSCAN12	novel	5495	5	NA	NA	-21	-8	any annotated donor/acceptor	FALSE	canonical	1	2544	junction_1	25813.817551071366	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	168	1982	25.0	-15	True	AATAAA	-13
PB.10710.5	chr7	-	1991	6	full-splice_match	TRIM4	ENST00000354241.5	1942	6	-28	-21	10	21	multi-exon	FALSE	canonical	1	43969	junction_1	108873.3740775953	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	121	1005	70.0	8	True	NA	NA
PB.2405.1	chr12	+	2648	2	full-splice_match	KCNA1	ENST00000382545.5	7985	2	-2	5339	-2	-5269	multi-exon	FALSE	canonical	1	7881	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	495	1488	1110	2597	75.0	-2	True	AAAAAG	-26
PB.7437.2	chr21	+	4589	13	incomplete-splice_match	SIK1B	ENST00000613488.2	4705	14	934	-1	898	1	5prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	17	2368	35.0	NA	False	AATAAA	-13
PB.10710.1	chr7	-	3373	6	full-splice_match	TRIM4	ENST00000349062.6	3374	6	7	-6	7	6	multi-exon	FALSE	canonical	1	231477	junction_5	53402.74102927676	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	193	1617	20.0	2	True	NA	NA
PB.1137.6	chr1	-	2540	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	993	-14	any annotated donor/acceptor	FALSE	canonical	1	612	junction_3	87750.40158059425	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	177	1625	70.0	2699	False	AAGAAA	-29
PB.10710.3	chr7	-	2927	7	novel_not_in_catalog	TRIM4	novel	639	6	NA	NA	4	-488	any annotated donor/acceptor	FALSE	canonical	1	12637	junction_5	136779.77271349574	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	673	1665	30.0	2	True	AGTAAA	-16
PB.10710.2	chr7	-	2717	6	full-splice_match	TRIM4	ENST00000349062.6	3374	6	85	572	16	-572	multi-exon	FALSE	canonical	1	231477	junction_5	53402.74102927676	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	115	1539	70.0	14	True	NA	NA
PB.9825.3	chr6	-	4376	6	full-splice_match	ZSCAN12	ENST00000396827.3	3909	6	-70	-397	-67	133	multi-exon	FALSE	canonical	1	14249	junction_2	18138.664592521687	NA	2	NA	TRUE	NA	NA	NA	C	coding	604	1815	214	2028	25.0	-29	False	NA	NA
PB.1137.9	chr1	-	1662	3	full-splice_match	DUSP10	ENST00000477026.5	1009	3	0	-653	0	-14	multi-exon	FALSE	canonical	1	17834	junction_2	79997.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	325	747	70.0	-1	True	AAGAAA	-29
PB.9825.2	chr6	-	4402	7	novel_not_in_catalog	ZSCAN12	novel	5495	5	NA	NA	-11	133	any annotated donor/acceptor	FALSE	canonical	1	4049	junction_3	24945.9449170713	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	158	1855	25.0	-5	True	NA	NA
PB.7558.1	chr21	-	1741	4	full-splice_match	SUMO3	ENST00000332859.10	1807	4	66	0	-12	0	multi-exon	FALSE	canonical	1	777701	junction_3	764258.8637959436	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	96	407	25.0	-4	True	AGTAAA	-20
PB.6244.1	chr19	-	5168	3	full-splice_match	ZNF772	ENST00000425074.3	1601	3	0	-3567	0	3	multi-exon	FALSE	canonical	1	18474	junction_1	18854.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	377	1134	344	1477	20.0	-1	True	NA	NA
PB.6244.7	chr19	-	3076	4	full-splice_match	ZNF772	ENST00000356584.7	1799	4	-22	-1255	-3	1255	multi-exon	FALSE	canonical	1	19872	junction_2	16338.457991975729	NA	8	NA	TRUE	NA	NA	NA	C	coding	448	1347	246	1592	5.0	11	True	NA	NA
PB.6244.6	chr19	-	5052	2	full-splice_match	ZNF772	ENST00000427512.6	5130	2	-1	79	-1	-79	multi-exon	FALSE	canonical	1	8359	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	377	1134	310	1443	15.0	-6	True	NA	NA
PB.6244.5	chr19	-	5279	4	full-splice_match	ZNF772	ENST00000356584.7	1799	4	-22	-3458	-3	-1	multi-exon	FALSE	canonical	1	19872	junction_2	16338.457991975729	NA	5	NA	TRUE	NA	NA	NA	C	coding	448	1347	246	1592	20.0	11	True	NA	NA
PB.6244.4	chr19	-	5402	5	full-splice_match	ZNF772	ENST00000343280.8	5419	5	16	1	-3	-1	multi-exon	FALSE	canonical	1	3040	junction_2	21373.607966368243	NA	5	NA	TRUE	NA	NA	NA	C	coding	489	1470	246	1715	20.0	11	True	NA	NA
PB.11174.2	chr8	+	2141	1	novel_in_catalog	AC079089.1	novel	828	2	NA	NA	-9	-1110	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	244	735	3	737	90.0	-2	True	NA	NA
PB.11564.1	chr9	-	2378	2	novel_not_in_catalog	AL845472.2	novel	4080	2	NA	NA	996	8081	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	132	399	1768	2166	80.0	1010	False	NA	NA
PB.11474.4	chr9	+	2334	1	novel_in_catalog	DENND4C	novel	6718	33	NA	NA	-93	-43634	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	11	True	NA	NA
PB.4147.1	chr16	+	1202	11	full-splice_match	GNPTG	ENST00000204679.8	1983	11	18	763	-3	0	multi-exon	FALSE	canonical	1	202961	junction_1	253962.03596303522	NA	1	NA	TRUE	NA	NA	NA	A	coding	305	918	26	943	35.0	10	True	AGTAAA	-15
PB.8824.1	chr4	-	4308	9	full-splice_match	RCHY1	ENST00000324439.9	4686	9	380	-2	7	2	multi-exon	FALSE	canonical	1	287354	junction_6	45102.285415347855	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	20	805	20.0	-13	True	NA	NA
PB.4056.1	chr15	+	2676	3	novel_not_in_catalog	AC078905.1	novel	509	2	NA	NA	-3337	2017	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	193.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	115	348	1489	1836	35.0	0	True	NA	NA
PB.1137.12	chr1	-	1957	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	-1666	103	any annotated donor/acceptor	FALSE	canonical	1	1368	junction_3	87395.10531806434	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	144	1592	70.0	-47	False	TTTAAA	-7
PB.11564.2	chr9	-	4100	1	full-splice_match	AL845472.2	ENST00000633881.1	4082	1	-17	-1	-17	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	223	672	405	1076	35.0	-3	True	NA	NA
PB.1137.11	chr1	-	1966	4	full-splice_match	DUSP10	ENST00000366899.3	2676	4	87	623	0	103	multi-exon	FALSE	canonical	1	177829	junction_1	26646.787252666854	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	153	1601	70.0	-1	True	TTTAAA	-7
PB.8824.2	chr4	-	4170	9	full-splice_match	RCHY1	ENST00000324439.9	4686	9	380	136	7	-136	multi-exon	FALSE	canonical	1	287354	junction_6	45102.285415347855	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	20	805	20.0	-13	True	NA	NA
PB.8824.5	chr4	-	1551	8	full-splice_match	RCHY1	ENST00000513257.5	759	8	-83	-709	34	179	multi-exon	FALSE	canonical	1	15223	junction_2	119257.45850752259	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	84	842	30.0	33	False	AATAAA	-14
PB.5051.1	chr17	+	1885	10	full-splice_match	ACBD4	ENST00000586346.5	1579	10	1	-307	-1	-15	multi-exon	FALSE	canonical	1	74216	junction_6	30815.12795870092	NA	0	NA	TRUE	NA	NA	NA	A	coding	341	1026	344	1369	70.0	-39	True	NA	NA
PB.9825.9	chr6	-	5609	4	incomplete-splice_match	ZSCAN12	ENST00000396827.3	3909	6	-23	7628	-20	-7628	3prime_fragment	FALSE	canonical	1	55964	junction_2	5304.507663822869	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	167	2002	80.0	-14	True	NA	NA
PB.7580.12	chr21	-	516	3	full-splice_match	S100B	ENST00000291700.8	877	3	127	234	127	85	multi-exon	FALSE	canonical	1	1223681	junction_2	200230.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	71	349	20.0	0	True	NA	NA
PB.9825.8	chr6	-	7709	4	incomplete-splice_match	ZSCAN12	ENST00000396827.3	3909	6	-22	5527	-19	-5527	3prime_fragment	FALSE	canonical	1	55964	junction_2	5304.507663822869	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1836	166	2001	50.0	-13	True	NA	NA
PB.7580.11	chr21	-	3118	2	full-splice_match	S100B	ENST00000397648.1	839	2	-2189	-90	126	90	multi-exon	FALSE	canonical	1	1624142	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.9235.29	chr5	+	3641	13	full-splice_match	GPBP1	ENST00000424459.7	4683	13	145	897	-24	195	multi-exon	FALSE	canonical	1	215850	junction_6	294555.18629351904	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1130	2611	20.0	8	True	ATTAAA	-14
PB.7510.3	chr21	-	2999	12	novel_not_in_catalog	SETD4	novel	4272	10	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	961	junction_11	50060.784711197106	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	226	1548	15.0	1	True	ATTAAA	-16
PB.8942.10	chr4	+	4477	16	full-splice_match	ALPK1	ENST00000177648.13	4537	16	0	60	0	-60	multi-exon	FALSE	canonical	1	17860	junction_2	23344.98812412539	NA	1	NA	TRUE	NA	NA	NA	C	coding	1244	3735	201	3935	15.0	-31	True	NA	NA
PB.7580.10	chr21	-	757	3	full-splice_match	S100B	ENST00000291700.8	877	3	126	-6	126	6	multi-exon	FALSE	canonical	1	1223681	junction_2	200230.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	72	350	30.0	-1	True	TTTAAA	-27
PB.1127.8	chr1	+	1448	5	full-splice_match	LYPLAL1	ENST00000366928.9	1898	5	41	409	1	-409	multi-exon	FALSE	canonical	1	256380	junction_2	113861.1154444308	NA	15	1	TRUE	NA	NA	NA	C	coding	237	714	7	720	45.0	7	True	NA	NA
PB.1127.9	chr1	+	1684	4	novel_in_catalog	LYPLAL1	novel	1898	5	NA	NA	-50	-6	combination_of_known_junctions	FALSE	canonical	1	12893	junction_1	259089.83256906603	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	224	553	25.0	-63	False	NA	NA
PB.1240.34	chr1	-	2931	14	full-splice_match	HNRNPU	ENST00000640218.1	6858	14	-5	3932	-4	-26	multi-exon	FALSE	canonical	1	663885	junction_13	1717621.40964347	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	236	2713	40.0	-1	True	TTTAAA	-34
PB.6799.17	chr2	+	2427	10	full-splice_match	MARCH7	ENST00000259050.8	5922	10	7	3488	-1	130	multi-exon	FALSE	canonical	1	144099	junction_1	174545.66581234994	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	116	2230	40.0	0	True	ATTAAA	-18
PB.9235.21	chr5	+	2867	12	novel_in_catalog	GPBP1	novel	4683	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	35892	junction_8	313647.2712543332	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	1161	2537	35.0	-23	True	AATAAA	-20
PB.10951.2	chr7	+	2110	6	incomplete-splice_match	NOM1	ENST00000275820.3	6077	11	-7	9830	-7	0	3prime_fragment	FALSE	canonical	1	146282	junction_4	26650.68307567369	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	23	2041	15.0	-18	True	NA	NA
PB.9235.23	chr5	+	2805	11	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	1	516	junction_2	323230.806069966	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	1114	2475	35.0	-21	True	AATAAA	-20
PB.9235.22	chr5	+	1902	9	incomplete-splice_match	GPBP1	ENST00000424459.7	4683	13	114	17586	13	-2386	3prime_fragment	FALSE	canonical	1	215850	junction_6	257974.96714067893	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	741	1161	1901	70.0	-23	True	NA	NA
PB.7380.1	chr20	+	5070	4	intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	356	junction_2	445.8223363129707	NA	22	NA	FALSE	NA	NA	NA	A	coding	106	321	2614	2934	35.0	1230	False	AATAAA	-13
PB.9235.24	chr5	+	3089	14	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	18	0	any annotated donor/acceptor	FALSE	canonical	1	10894	junction_2	358423.0335382278	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	1278	2759	35.0	-18	True	AATAAA	-20
PB.9235.27	chr5	+	2965	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-32	0	any annotated donor/acceptor	FALSE	canonical	1	7573	junction_3	346081.73334355047	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	1214	2635	35.0	0	True	AATAAA	-20
PB.10951.3	chr7	+	2738	11	full-splice_match	NOM1	ENST00000275820.3	6077	11	7	3332	7	-233	multi-exon	FALSE	canonical	1	119511	junction_7	26988.50995683163	NA	27	1	TRUE	NA	NA	NA	C	coding	860	2583	9	2591	20.0	-4	True	NA	NA
PB.6799.15	chr2	+	3807	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-1	281	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	174130.8624659506	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	171	2285	55.0	0	True	AATAAA	-34
PB.777.28	chr1	+	1869	1	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	9	-12470	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	NA	NA
PB.777.29	chr1	+	3781	27	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-7	94	combination_of_known_junctions	FALSE	canonical	1	105541	junction_1	403593.2115663265	NA	2	2	TRUE	NA	NA	NA	C	coding	1097	3294	125	3418	20.0	2	True	NA	NA
PB.777.26	chr1	+	3463	25	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	9	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	385437.0290987318	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2982	131	3112	5.0	-2	True	AATAAA	-21
PB.6799.12	chr2	+	2348	8	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-4222	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	196217.25829138415	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	188	2311	30.0	-17	True	AATAAA	-20
PB.777.24	chr1	+	4970	24	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	-3	intron_retention	FALSE	canonical	1	105541	junction_1	313582.3348030756	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	130	2655	10.0	-3	True	AATAAA	-20
PB.9258.6	chr5	+	6303	25	full-splice_match	ERBIN	ENST00000511297.5	4257	25	-77	-1969	40	-1	multi-exon	FALSE	canonical	1	60271	junction_17	128344.91356421397	NA	0	NA	TRUE	NA	NA	NA	C	coding	1367	4104	215	4318	10.0	-3	True	AAAAAG	-26
PB.777.22	chr1	+	3513	25	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	1	2297	junction_1	336209.57046870334	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	215	3163	10.0	-3	True	AATAAA	-20
PB.6232.1	chr19	+	3062	6	full-splice_match	ZNF470	ENST00000330619.12	7151	6	-16	4105	-16	-4104	multi-exon	FALSE	canonical	1	29179	junction_2	5408.592105160084	NA	4	NA	TRUE	NA	NA	NA	A	coding	717	2154	703	2856	55.0	0	True	NA	NA
PB.777.20	chr1	+	3927	27	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	395172.2624376098	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	132	3335	10.0	-3	True	NA	NA
PB.6799.13	chr2	+	1784	5	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	761	combination_of_known_junctions	FALSE	canonical	1	145544	junction_1	222094.57422346005	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1596	188	1783	65.0	-17	True	GATAAA	-38
PB.9618.11	chr5	-	3232	8	incomplete-splice_match	STK10	ENST00000176763.9	6060	19	162	52308	162	-1953	3prime_fragment	FALSE	canonical	1	286977	junction_4	41765.58977709487	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	183	1337	75.0	-29	True	NA	NA
PB.1223.5	chr1	-	3658	15	novel_not_in_catalog	ERO1B	novel	4567	16	NA	NA	-15	-916	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	40440.37419946627	NA	4	1	TRUE	NA	NA	NA	B	coding	244	735	218	952	35.0	-43	False	AATAAA	-19
PB.6799.10	chr2	+	3314	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	0	-7	no_combination_of_known_junctions	FALSE	canonical	1	2441	junction_1	228860.67462104536	NA	13	NA	TRUE	NA	NA	NA	C	coding	575	1728	353	2080	20.0	-17	True	AATAAA	-19
PB.1552.1	chr10	-	1432	7	full-splice_match	PDLIM1	ENST00000329399.6	1452	7	21	-1	9	1	multi-exon	FALSE	canonical	1	1311254	junction_4	347723.5564618426	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	89	1078	10.0	-1	True	AATAAA	-17
PB.1011.2	chr1	-	5292	12	novel_not_in_catalog	UCHL5	novel	5327	11	NA	NA	-22	-4	any annotated donor/acceptor	FALSE	canonical	1	19	junction_3	253280.93512211015	NA	7	3	TRUE	NA	NA	NA	C	coding	280	843	124	966	30.0	-45	True	AATAAA	-17
PB.11712.8	chr9	+	4412	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	268244	332	no_combination_of_known_junctions	FALSE	canonical	1	136664	junction_1	40191.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	863	2592	1	2592	20.0	4	True	AATAAA	-19
PB.5454.11	chr18	+	4969	25	full-splice_match	FHOD3	ENST00000257209.8	4967	25	-1	-1	-1	1	multi-exon	FALSE	canonical	1	46184	junction_1	24846.234345770197	NA	2	NA	TRUE	NA	NA	NA	C	coding	1439	4320	124	4443	35.0	0	True	AATAAA	-16
PB.1011.3	chr1	-	5226	12	novel_in_catalog	UCHL5	novel	5327	11	NA	NA	-28	-117	combination_of_known_junctions	FALSE	canonical	1	84596	junction_1	212647.10140205114	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	178	1161	20.0	637	False	AATAAA	-22
PB.893.2	chr1	+	2413	13	novel_in_catalog	NUF2	novel	567	7	NA	NA	1	-4	intron_retention	FALSE	canonical	1	159951	junction_1	49443.60168098093	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	1181	2122	10.0	8	True	AATATA	-20
PB.9618.12	chr5	-	1973	1	novel_in_catalog	STK10	novel	6060	19	NA	NA	-2776	-1953	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.12251.2	chrX	+	3598	1	full-splice_match	GLUD2	ENST00000328078.2	2493	1	-47	-1058	-47	1058	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	558	1677	145	1821	20.0	-70	False	TATAAA	-35
PB.12251.1	chrX	+	2420	1	full-splice_match	GLUD2	ENST00000328078.2	2493	1	-66	139	-66	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	558	1677	164	1840	35.0	-89	False	AATAAA	-19
PB.893.3	chr1	+	2191	15	novel_in_catalog	NUF2	novel	567	7	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	1	2994	junction_1	106216.30086840894	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	506	1900	10.0	-50	True	AATATA	-20
PB.7529.18	chr21	+	2740	17	novel_not_in_catalog	MX1	novel	762	5	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	2197	junction_15	333668.9548140714	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	366	2285	10.0	-5	True	AATAAA	-17
PB.11990.1	chrX	-	4174	15	full-splice_match	SCML2	ENST00000251900.8	4200	15	30	-4	30	4	multi-exon	FALSE	canonical	1	33347	junction_1	12816.618021744507	NA	0	NA	TRUE	NA	NA	NA	A	coding	700	2103	131	2233	30.0	-12	True	AATAAA	-22
PB.4911.16	chr17	-	3817	3	novel_not_in_catalog	SLFN12L	novel	2752	5	NA	NA	102	-37460	any annotated donor/acceptor	FALSE	canonical	1	10733	junction_1	17564.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	106	321	778	1098	100.0	-1	True	NA	NA
PB.1517.14	chr10	-	2624	9	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-52	-1	any annotated donor/acceptor	FALSE	canonical	1	15001	junction_3	169668.64866810065	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	60	1055	20.0	-20	True	AATAAA	-14
PB.4911.14	chr17	-	2048	3	incomplete-splice_match	SLFN12L	ENST00000361112.6	2752	5	118	4106	118	-4087	3prime_fragment	FALSE	canonical	1	4628	junction_1	20616.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	394	1185	762	1946	30.0	15	False	ATTAAA	-18
PB.4911.15	chr17	-	1735	3	novel_not_in_catalog	SLFN12L	novel	2752	5	NA	NA	140	-22779	any annotated donor/acceptor	FALSE	canonical	1	235	junction_1	22813.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	99	300	850	1149	45.0	5	True	AATAAA	-12
PB.4911.12	chr17	-	5620	5	novel_in_catalog	SLFN13	novel	8469	6	NA	NA	21	0	intron_retention	FALSE	canonical	1	34501	junction_4	19386.514346318163	NA	1	NA	TRUE	NA	NA	NA	C	coding	897	2694	1830	4523	80.0	946	False	NA	NA
PB.1517.10	chr10	-	2837	11	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-71	13	any annotated donor/acceptor	FALSE	canonical	1	7457	junction_6	170068.07884714872	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	526	1254	15.0	-39	True	AATAAA	-28
PB.4911.10	chr17	-	4031	7	full-splice_match	SLFN13	ENST00000526861.5	6004	7	18	1955	0	0	multi-exon	FALSE	canonical	1	3922	junction_4	28914.520282012094	NA	1	NA	TRUE	NA	NA	NA	C	coding	897	2694	241	2934	80.0	0	True	NA	NA
PB.4911.11	chr17	-	3037	6	novel_not_in_catalog	SLFN13	novel	8469	6	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	427	junction_4	28905.335650014513	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	240	1940	80.0	-2	True	NA	NA
PB.1517.19	chr10	-	2437	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-69	-295	any annotated donor/acceptor	FALSE	canonical	1	132168	junction_6	132309.85500243522	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	77	1162	10.0	-37	True	NA	NA
PB.4703.11	chr17	+	5446	19	novel_in_catalog	RABEP1	novel	551	3	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	17642	junction_9	150501.2076190835	NA	3	NA	TRUE	NA	NA	NA	C	coding	884	2655	204	2858	5.0	0	True	ATTAAA	-19
PB.3100.3	chr13	-	5716	14	full-splice_match	STARD13	ENST00000399365.7	5784	14	-17	85	-17	-85	multi-exon	FALSE	canonical	1	16944	junction_13	25091.05185769309	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	391	3378	30.0	0	True	AATAAA	-25
PB.3100.2	chr13	-	5790	14	full-splice_match	STARD13	ENST00000399365.7	5784	14	3	-9	3	9	multi-exon	FALSE	canonical	1	16944	junction_13	25091.05185769309	NA	1	NA	TRUE	NA	NA	NA	C	coding	995	2988	371	3358	30.0	20	True	AATAAA	-33
PB.3100.1	chr13	-	5917	14	full-splice_match	STARD13	ENST00000336934.9	5917	14	-6	6	-6	-6	multi-exon	FALSE	canonical	1	40553	junction_13	20398.41391473088	NA	2	NA	TRUE	NA	NA	NA	C	coding	1113	3342	124	3465	40.0	-34	True	AATAAA	-33
PB.2604.4	chr12	-	1966	10	full-splice_match	CERS5	ENST00000317551.10	2051	10	85	0	6	0	multi-exon	FALSE	canonical	1	188269	junction_9	79272.05109099197	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	41	1219	15.0	31	True	ATTAAA	-15
PB.3100.7	chr13	-	4847	14	novel_not_in_catalog	STARD13	novel	5917	14	NA	NA	-18	-817	any annotated donor/acceptor	FALSE	canonical	1	599	junction_4	33728.6970136216	NA	3	NA	TRUE	NA	NA	NA	C	coding	949	2850	392	3241	30.0	-1	True	AATAAA	-21
PB.3100.6	chr13	-	5015	14	full-splice_match	STARD13	ENST00000399365.7	5784	14	-39	808	-39	-808	multi-exon	FALSE	canonical	1	16944	junction_13	25091.05185769309	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	413	3400	40.0	4	True	AATAAA	-30
PB.2604.1	chr12	-	2286	10	full-splice_match	CERS5	ENST00000317551.10	2051	10	38	-273	9	-219	multi-exon	FALSE	canonical	1	188269	junction_9	79272.05109099197	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	88	1266	100.0	-16	True	NA	NA
PB.3100.4	chr13	-	5607	14	full-splice_match	STARD13	ENST00000399365.7	5784	14	-18	195	-18	-195	multi-exon	FALSE	canonical	1	16944	junction_13	25091.05185769309	NA	1	NA	TRUE	NA	NA	NA	C	coding	995	2988	392	3379	75.0	-1	True	TTTAAA	-14
PB.3100.9	chr13	-	3691	14	full-splice_match	STARD13	ENST00000399365.7	5784	14	16	2077	16	-2077	multi-exon	FALSE	canonical	1	16944	junction_13	25091.05185769309	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	358	3345	25.0	-1	True	NA	NA
PB.3100.8	chr13	-	3935	14	full-splice_match	STARD13	ENST00000399365.7	5784	14	3	1846	3	-1846	multi-exon	FALSE	canonical	1	16944	junction_13	25091.05185769309	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	371	3358	65.0	20	True	NA	NA
PB.6524.4	chr2	-	5088	20	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	-15	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	189035.48890391266	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	199	2244	30.0	38	False	AATAAA	-14
PB.4231.4	chr16	+	5091	3	incomplete-splice_match	METTL22	ENST00000163678.11	1510	10	1	12791	1	-1849	3prime_fragment	FALSE	canonical	1	124746	junction_1	18366.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	173	522	255	776	75.0	-6	True	NA	NA
PB.4913.18	chr17	+	3375	22	full-splice_match	AP2B1	ENST00000618940.4	3415	22	40	0	-11	0	multi-exon	FALSE	canonical	1	49286	junction_1	245553.37095907496	NA	1	NA	TRUE	NA	NA	NA	C	coding	951	2856	133	2988	30.0	27	False	ATTAAA	-20
PB.4913.19	chr17	+	3283	21	novel_in_catalog	AP2B1	novel	552	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	29255	junction_14	255912.38048290572	NA	3	1	TRUE	NA	NA	NA	C	coding	937	2814	83	2896	30.0	11	False	ATTAAA	-20
PB.11085.3	chr8	+	4815	12	full-splice_match	ERLIN2	ENST00000519638.2	4766	12	-60	11	-27	-11	multi-exon	FALSE	canonical	1	240359	junction_1	78611.50990590341	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	121	1140	35.0	-2	True	AATAAA	-19
PB.9371.9	chr5	+	5465	30	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	18	-156	combination_of_known_junctions	FALSE	canonical	1	40589	junction_2	95576.03479288143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1185	3558	492	4049	35.0	-19	True	ATTAAA	-20
PB.9371.8	chr5	+	5603	30	novel_in_catalog	PPIP5K2	novel	505	3	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_21	105227.71963185523	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	492	4031	55.0	-19	True	ATTAAA	-15
PB.4913.10	chr17	+	3450	22	novel_not_in_catalog	AP2B1	novel	552	5	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	24817	junction_18	274833.42855845846	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	155	3064	30.0	-24	True	ATTAAA	-19
PB.4913.11	chr17	+	3370	21	novel_not_in_catalog	AP2B1	novel	552	5	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	235	junction_1	267430.7439617031	NA	2	NA	TRUE	NA	NA	NA	C	coding	937	2814	170	2983	30.0	-17	True	ATTAAA	-20
PB.4913.12	chr17	+	3477	23	novel_not_in_catalog	AP2B1	novel	552	5	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	canonical	1	24817	junction_19	260406.48768239748	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	141	3092	30.0	-10	True	ATTAAA	-18
PB.4913.13	chr17	+	3459	21	novel_not_in_catalog	AP2B1	novel	552	5	NA	NA	-6	4	any annotated donor/acceptor	FALSE	canonical	1	5283	junction_1	267003.0299788937	NA	24	3	TRUE	NA	NA	NA	C	coding	937	2814	250	3063	20.0	-14	True	ATTAAA	-29
PB.4913.14	chr17	+	3448	22	novel_in_catalog	AP2B1	novel	552	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	158936	junction_1	237193.49209471612	NA	2	NA	TRUE	NA	NA	NA	C	coding	951	2856	206	3061	30.0	-8	True	ATTAAA	-20
PB.4913.15	chr17	+	5771	22	novel_in_catalog	AP2B1	novel	552	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	158936	junction_1	237193.49209471612	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	206	3061	35.0	-8	True	AATAAA	-14
PB.4913.16	chr17	+	5729	21	novel_in_catalog	AP2B1	novel	552	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	29255	junction_14	255912.38048290572	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	205	3018	30.0	-7	True	AATAAA	-15
PB.4913.17	chr17	+	2536	15	novel_in_catalog	AP2B1	novel	552	5	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	1	34677	junction_14	198861.9724098597	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	194	2395	45.0	4	True	AATAAA	-21
PB.6580.1	chr2	-	1701	5	novel_in_catalog	EVA1A	novel	589	4	NA	NA	1	-27	no_combination_of_known_junctions	FALSE	canonical	1	9110	junction_4	38569.13598575291	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	352	810	70.0	0	True	ATTAAA	-22
PB.7264.1	chr20	+	1527	1	antisense	novelGene_RBM39_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6580.4	chr2	-	1969	6	novel_in_catalog	EVA1A	novel	589	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10598	junction_4	35512.78713590359	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	593	1051	5.0	-1	True	AATAAA	-17
PB.6580.5	chr2	-	1794	4	full-splice_match	EVA1A	ENST00000393913.7	1802	4	-23	31	0	-31	multi-exon	FALSE	canonical	1	25188	junction_3	34397.00673992821	NA	5	NA	TRUE	NA	NA	NA	C	coding	152	459	449	907	70.0	-1	True	ATTAAA	-18
PB.6580.6	chr2	-	1985	6	novel_not_in_catalog	EVA1A	novel	589	4	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	40671.10509637032	NA	12	3	TRUE	NA	NA	NA	C	coding	152	459	610	1068	5.0	0	True	AATAAA	-16
PB.6580.7	chr2	-	1909	5	novel_not_in_catalog	EVA1A	novel	589	4	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	canonical	1	11432	junction_2	39995.962079783756	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	534	992	5.0	-11	True	AATAAA	-16
PB.3597.3	chr14	-	3586	23	incomplete-splice_match	CEP128	ENST00000555265.5	4662	25	47	30206	-19	0	3prime_fragment	FALSE	canonical	1	27646	junction_19	13326.265652139948	NA	0	NA	TRUE	NA	NA	NA	C	coding	1034	3105	330	3434	25.0	-6	True	AATAAA	-23
PB.3597.2	chr14	-	4606	25	full-splice_match	CEP128	ENST00000555265.5	4662	25	58	-2	-8	-2	multi-exon	FALSE	canonical	1	27646	junction_21	13098.173645946788	NA	1	NA	TRUE	NA	NA	NA	C	coding	1094	3285	319	3603	20.0	5	True	AATAAA	-25
PB.3597.1	chr14	-	5005	26	novel_in_catalog	CEP128	novel	3774	15	NA	NA	-13	-38	no_combination_of_known_junctions	TRUE	canonical	1	4432	junction_1	16239.268516826734	NA	2	NA	TRUE	NA	NA	NA	C	coding	1094	3285	324	3608	85.0	0	True	NA	NA
PB.6524.5	chr2	-	2263	18	novel_not_in_catalog	GFPT1	novel	8703	20	NA	NA	29	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	186191.50259882142	NA	2	1	TRUE	NA	NA	NA	C	coding	634	1905	149	2053	30.0	-3	True	AATAAA	-13
PB.3597.4	chr14	-	2541	13	incomplete-splice_match	CEP128	ENST00000555265.5	4662	25	24	333685	24	2	3prime_fragment	FALSE	canonical	1	27646	junction_9	16043.75280526314	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	353	1624	40.0	-7	True	AATAAA	-19
PB.1497.4	chr10	-	3050	6	novel_in_catalog	NUTM2B-AS1	novel	1233	7	NA	NA	10	2164	combination_of_known_junctions	FALSE	canonical	1	595	junction_1	70917.78813696885	NA	44	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-39	False	ATTAAA	-13
PB.1497.5	chr10	-	4761	6	novel_not_in_catalog	NUTM2B-AS1	novel	1233	7	NA	NA	11	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	71134.37171325828	NA	4	NA	TRUE	NA	NA	NA	C	coding	36	111	206	316	45.0	72	False	AGTAAA	-15
PB.6401.2	chr2	+	3018	17	full-splice_match	SPAST	ENST00000642999.1	4701	17	-14	1697	-2	69	multi-exon	FALSE	canonical	1	107912	junction_1	32003.845547193134	NA	13	1	TRUE	NA	NA	NA	C	coding	530	1593	137	1729	40.0	-38	True	AATAAA	-34
PB.6401.3	chr2	+	2718	17	full-splice_match	SPAST	ENST00000315285.8	5277	17	13	2546	13	55	multi-exon	FALSE	canonical	1	107912	junction_1	32003.845547193134	NA	2	NA	TRUE	NA	NA	NA	C	coding	616	1851	273	2123	25.0	-15	True	CATAAA	-13
PB.6401.4	chr2	+	4753	16	full-splice_match	SPAST	ENST00000644954.1	4732	16	4	-25	4	0	multi-exon	FALSE	canonical	1	27512	junction_3	48261.00333515203	NA	3	NA	TRUE	NA	NA	NA	C	coding	498	1497	117	1613	15.0	-18	True	AATAAA	-12
PB.6401.5	chr2	+	4858	17	full-splice_match	SPAST	ENST00000642999.1	4701	17	-2	-155	-2	0	multi-exon	FALSE	canonical	1	107912	junction_1	32003.845547193134	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	125	1717	10.0	-26	True	AATAAA	-13
PB.2352.9	chr11	+	2274	10	novel_in_catalog	EI24	novel	2455	11	NA	NA	12	-13	intron_retention	FALSE	canonical	1	14507	junction_9	289346.40974666324	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	1225	1728	100.0	-4	True	NA	NA
PB.1497.3	chr10	-	2372	5	novel_in_catalog	NUTM2B-AS1	novel	366	4	NA	NA	-13	1569	combination_of_known_junctions	FALSE	canonical	1	26583	junction_3	69669.94087122509	NA	2	NA	TRUE	NA	NA	NA	C	coding	36	111	230	340	40.0	48	False	ATTAAA	-22
PB.2352.7	chr11	+	1608	11	full-splice_match	EI24	ENST00000278903.10	2455	11	263	584	2	43	multi-exon	FALSE	canonical	1	14507	junction_10	289933.09368971665	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	166	1188	45.0	2	True	NA	NA
PB.2352.6	chr11	+	1736	11	full-splice_match	EI24	ENST00000278903.10	2455	11	261	458	0	-13	multi-exon	FALSE	canonical	1	14507	junction_10	289933.09368971665	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	168	1190	100.0	0	True	NA	NA
PB.2352.5	chr11	+	1823	12	novel_in_catalog	EI24	novel	2455	11	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	1	14507	junction_11	345984.69209472876	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	255	1277	100.0	0	True	NA	NA
PB.2352.4	chr11	+	1631	10	novel_in_catalog	EI24	novel	2455	11	NA	NA	3	-14	no_combination_of_known_junctions	FALSE	canonical	1	14507	junction_9	352445.9362159126	NA	2	1	TRUE	NA	NA	NA	C	coding	300	903	184	1086	95.0	-16	True	NA	NA
PB.2352.3	chr11	+	2087	10	novel_in_catalog	EI24	novel	2455	11	NA	NA	-2	-8	no_combination_of_known_junctions	FALSE	canonical	1	14507	junction_9	352445.9362159126	NA	18	2	TRUE	NA	NA	NA	C	coding	300	903	189	1091	35.0	-21	True	ATTAAA	-17
PB.2352.2	chr11	+	1777	11	full-splice_match	EI24	ENST00000618552.4	1747	11	-9	-21	-9	-12	multi-exon	TRUE	canonical	1	12382	junction_2	336885.9210082992	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	727	1230	100.0	-28	True	NA	NA
PB.2352.1	chr11	+	2187	11	full-splice_match	EI24	ENST00000278903.10	2455	11	261	7	0	-7	multi-exon	FALSE	canonical	1	14507	junction_10	289933.09368971665	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	168	1190	35.0	0	True	ATTAAA	-18
PB.10898.12	chr7	-	4126	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	-15	724	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	111863.6840754742	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	200	2965	75.0	2449	False	NA	NA
PB.11354.2	chr8	+	1807	2	full-splice_match	CHRAC1	ENST00000519533.1	1678	2	103	-232	103	232	multi-exon	FALSE	canonical	1	34325	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5	True	NA	NA
PB.4674.8	chr17	-	2324	14	novel_in_catalog	NCBP3	novel	12770	13	NA	NA	0	391	combination_of_known_junctions	FALSE	canonical	1	91099	junction_1	71208.96268849587	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	29	1927	45.0	-6	True	AATATA	-16
PB.4674.9	chr17	-	5580	12	novel_in_catalog	NCBP3	novel	12770	13	NA	NA	1	297	intron_retention	FALSE	canonical	1	277023	junction_11	33505.52115992746	NA	5	NA	TRUE	NA	NA	NA	C	coding	340	1023	3757	4779	35.0	-5	True	TTTAAA	-29
PB.5418.1	chr18	+	2496	1	incomplete-splice_match	MIB1	ENST00000261537.6	9576	21	127132	10	64719	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-9
PB.4674.1	chr17	-	7710	14	novel_in_catalog	NCBP3	novel	12770	13	NA	NA	7	-4591	combination_of_known_junctions	FALSE	canonical	1	91099	junction_1	71208.96268849587	NA	48	4	TRUE	NA	NA	NA	C	coding	632	1899	22	1920	45.0	1	True	NA	NA
PB.4674.2	chr17	-	3416	13	full-splice_match	NCBP3	ENST00000389005.5	12770	13	-12	9366	-12	-3	multi-exon	FALSE	canonical	1	263943	junction_6	36722.4099332486	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	41	1903	40.0	-18	False	AATAAA	-33
PB.4674.3	chr17	-	2951	14	novel_in_catalog	NCBP3	novel	12770	13	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	91099	junction_1	71208.96268849587	NA	2	NA	TRUE	NA	NA	NA	C	coding	632	1899	38	1936	40.0	-15	False	AATAAA	-33
PB.4674.4	chr17	-	3242	13	full-splice_match	NCBP3	ENST00000389005.5	12770	13	-11	9539	-11	-176	multi-exon	FALSE	canonical	1	263943	junction_6	36722.4099332486	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	40	1902	15.0	-17	False	AATAAA	-23
PB.4674.5	chr17	-	6106	12	novel_in_catalog	NCBP3	novel	12770	13	NA	NA	9	-181	intron_retention	FALSE	canonical	1	277023	junction_11	33505.52115992746	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	3749	4771	20.0	3	True	AATAAA	-18
PB.4674.6	chr17	-	2783	14	novel_in_catalog	NCBP3	novel	12770	13	NA	NA	-19	-181	combination_of_known_junctions	FALSE	canonical	1	91099	junction_1	71208.96268849587	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	48	1946	20.0	-25	False	AATAAA	-18
PB.4674.7	chr17	-	2722	13	full-splice_match	NCBP3	ENST00000389005.5	12770	13	-23	10071	-23	304	multi-exon	FALSE	canonical	1	263943	junction_6	36722.4099332486	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	52	1914	25.0	-29	False	TTTAAA	-36
PB.1139.5	chr1	-	2951	7	novel_not_in_catalog	TAF1A	novel	1648	11	NA	NA	0	1395	any annotated donor/acceptor	FALSE	canonical	1	812	junction_1	46365.362082054315	NA	5	1	TRUE	NA	NA	NA	C	coding	270	813	190	1002	40.0	-4	True	NA	NA
PB.1139.4	chr1	-	3102	8	novel_in_catalog	TAF1A	novel	1648	11	NA	NA	0	1403	combination_of_known_junctions	FALSE	canonical	1	16231	junction_1	32951.00045057627	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	210	1145	40.0	-24	True	NA	NA
PB.1139.1	chr1	-	1895	11	full-splice_match	TAF1A	ENST00000352967.8	1894	11	-3	2	-3	-2	multi-exon	TRUE	canonical	1	56449	junction_8	19520.598607624717	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	193	1545	25.0	-7	True	AATAAA	-26
PB.11200.1	chr8	-	2088	6	full-splice_match	IL7	ENST00000263851.8	2076	6	26	-38	26	38	multi-exon	FALSE	canonical	1	17244	junction_4	5096.637189363198	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	576	1109	40.0	-3	True	AATAAA	-16
PB.1139.3	chr1	-	3143	7	incomplete-splice_match	TAF1A	ENST00000352967.8	1894	11	28	9114	1	1407	3prime_fragment	FALSE	canonical	1	56449	junction_4	21643.615882569673	NA	5	NA	TRUE	NA	NA	NA	C	coding	299	900	162	1061	35.0	-6	True	NA	NA
PB.10891.2	chr7	+	2618	2	full-splice_match	SSBP1	ENST00000496622.1	2620	2	-9	11	-9	-11	multi-exon	FALSE	canonical	1	1916663	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-23	True	AATATA	-16
PB.10250.4	chr6	+	3034	4	novel_not_in_catalog	AIG1	novel	727	6	NA	NA	1	-19710	any annotated donor/acceptor	FALSE	canonical	1	237	junction_3	215286.47905987964	NA	3	NA	TRUE	NA	NA	NA	C	coding	203	612	27	638	40.0	-2	True	NA	NA
PB.10250.5	chr6	+	2459	4	full-splice_match	AIG1	ENST00000494282.6	3393	4	-1	935	1	-935	multi-exon	FALSE	canonical	1	63422	junction_3	186141.63641760062	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	27	440	15.0	-2	True	TTTAAA	-4
PB.5993.6	chr19	+	1830	12	novel_not_in_catalog	TIMM50	novel	1612	11	NA	NA	0	295	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	433109.3342859321	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	5	1066	10.0	1	True	ATTAAA	-13
PB.10891.1	chr7	+	2266	6	full-splice_match	SSBP1	ENST00000489378.5	1434	6	-23	-809	8	809	multi-exon	FALSE	canonical	1	1916663	junction_1	610766.8450154773	NA	91	3	TRUE	NA	NA	NA	C	coding	159	480	113	592	20.0	-30	True	AATAAA	-28
PB.10250.2	chr6	+	1389	6	full-splice_match	AIG1	ENST00000357847.8	1395	6	4	2	4	-2	multi-exon	FALSE	canonical	1	362663	junction_4	51143.688609250705	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	47	763	20.0	-22	True	AATAAA	-16
PB.10250.3	chr6	+	3401	4	full-splice_match	AIG1	ENST00000494282.6	3393	4	-4	-4	-2	4	multi-exon	FALSE	canonical	1	63422	junction_3	186141.63641760062	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	30	443	25.0	-5	True	AATAAA	-30
PB.9400.1	chr5	-	5595	3	full-splice_match	FEM1C	ENST00000274457.4	5816	3	218	3	218	-3	multi-exon	FALSE	canonical	1	147859	junction_2	32180.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	345	2198	35.0	-5	True	AATAAA	-15
PB.1340.4	chr10	-	2371	20	novel_in_catalog	ANKRD26	novel	6827	34	NA	NA	1	-2039	combination_of_known_junctions	FALSE	canonical	1	19246	junction_8	23075.866462305366	NA	0	NA	TRUE	NA	NA	NA	B	coding	735	2205	166	2370	75.0	0	True	ATTAAA	-44
PB.9400.5	chr5	-	3732	3	full-splice_match	FEM1C	ENST00000274457.4	5816	3	119	1965	119	-1965	multi-exon	FALSE	canonical	1	147859	junction_2	32180.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	444	2297	55.0	-1	True	NA	NA
PB.9400.6	chr5	-	2457	3	full-splice_match	FEM1C	ENST00000274457.4	5816	3	152	3207	152	-3207	multi-exon	FALSE	canonical	1	147859	junction_2	32180.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	411	2264	25.0	32	True	TATAAA	-16
PB.1340.3	chr10	-	2458	21	novel_not_in_catalog	ANKRD26	novel	6827	34	NA	NA	10	-2039	any annotated donor/acceptor	FALSE	canonical	1	39627	junction_17	20476.784740529944	NA	4	NA	TRUE	NA	NA	NA	B	coding	767	2301	157	2457	75.0	9	True	ATTAAA	-44
PB.7043.27	chr2	-	2217	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	187	junction_3	731450.2859505293	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	213	1466	45.0	-3	True	AATAAA	-15
PB.1340.2	chr10	-	2514	21	novel_not_in_catalog	ANKRD26	novel	6827	34	NA	NA	-3	13	any annotated donor/acceptor	FALSE	canonical	1	19246	junction_9	25701.16021408372	NA	0	NA	TRUE	NA	NA	NA	B	coding	781	2343	170	2512	65.0	-4	True	AAGAAA	-37
PB.1340.1	chr10	-	2870	23	novel_in_catalog	ANKRD26	novel	6827	34	NA	NA	-8	2335	combination_of_known_junctions	FALSE	canonical	1	19246	junction_11	25249.239463220954	NA	0	NA	TRUE	NA	NA	NA	B	coding	896	2688	181	2868	65.0	6	False	AATAGA	-4
PB.3544.1	chr14	+	1557	3	full-splice_match	ACOT2	ENST00000613168.1	1553	3	-9	5	-9	0	multi-exon	FALSE	canonical	1	330792	junction_1	78525.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	463	1392	26	1417	40.0	0	True	ATTAAA	-15
PB.9212.8	chr5	-	1749	4	novel_not_in_catalog	TMEM267	novel	2950	5	NA	NA	-7	-92	intron_retention	FALSE	canonical	1	3484	junction_2	5215.620065406094	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	407	850	30.0	-14	True	ATTAAA	-16
PB.9212.7	chr5	-	1688	3	full-splice_match	TMEM267	ENST00000397080.7	2338	3	-7	657	-1	-89	multi-exon	FALSE	canonical	1	54521	junction_2	62845.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	146	793	25.0	-34	True	ATTAAA	-19
PB.9212.6	chr5	-	2231	5	novel_not_in_catalog	TMEM267	novel	2950	5	NA	NA	-1	14	intron_retention	FALSE	canonical	1	10288	junction_3	69899.32646805332	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	586	1233	5.0	0	True	AATAAA	-15
PB.9212.5	chr5	-	2426	4	full-splice_match	TMEM267	ENST00000506860.1	736	4	-30	-1660	-2	-12	multi-exon	FALSE	canonical	1	5482	junction_2	80016.83643806192	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	239	886	40.0	-29	True	AATAAA	-16
PB.9212.4	chr5	-	2451	4	full-splice_match	TMEM267	ENST00000512085.5	1927	4	32	-556	-2	-12	multi-exon	FALSE	canonical	1	1067	junction_3	83331.24396447389	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	264	911	40.0	-1	True	AATAAA	-16
PB.9212.3	chr5	-	2682	4	novel_not_in_catalog	TMEM267	novel	2950	5	NA	NA	1	-11	intron_retention	FALSE	canonical	1	1477	junction_3	77746.7696049167	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	494	1141	35.0	-6	True	AATAAA	-17
PB.9212.2	chr5	-	2791	5	novel_not_in_catalog	TMEM267	novel	2950	5	NA	NA	-7	-8	intron_retention	FALSE	canonical	1	10288	junction_3	69899.32646805332	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	600	1247	40.0	-14	True	AATAAA	-20
PB.9212.1	chr5	-	2795	3	full-splice_match	TMEM267	ENST00000397080.7	2338	3	-465	8	-457	-8	multi-exon	FALSE	canonical	1	54521	junction_2	62845.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	215	648	604	1251	40.0	0	True	AATAAA	-20
PB.6804.1	chr2	+	2306	2	antisense	novelGene_AC009313.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2040	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	1	True	NA	NA
PB.465.51	chr1	-	1785	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	-7	325	-7	157	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	107	1288	30.0	-5	True	NA	NA
PB.2311.1	chr11	-	2627	1	novel_in_catalog	RPS25	novel	711	5	NA	NA	-11	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	142	429	680	1108	35.0	1	True	AATAAA	-14
PB.635.52	chr1	-	2991	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-23	any annotated donor/acceptor	FALSE	canonical	1	16772	junction_11	1536220.9493670892	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	1453	2802	40.0	-1	True	AATAAA	-22
PB.635.53	chr1	-	2663	20	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-55	any annotated donor/acceptor	FALSE	canonical	1	19607	junction_18	1513779.5352548894	NA	12	2	TRUE	NA	NA	NA	C	coding	767	2304	203	2506	75.0	-1	True	NA	NA
PB.11086.3	chr8	+	2460	8	full-splice_match	PLPBP	ENST00000328195.7	2558	8	52	46	-10	-46	multi-exon	FALSE	canonical	1	315294	junction_1	93889.57914008369	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	34	843	35.0	0	True	AATAAA	-19
PB.635.51	chr1	-	3010	20	full-splice_match	CSDE1	ENST00000358528.8	4076	20	-29	1095	-6	-55	multi-exon	FALSE	canonical	1	483912	junction_15	1625555.3695188337	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	457	2853	75.0	-11	True	NA	NA
PB.2311.2	chr11	-	2395	2	full-splice_match	RPS25	ENST00000524864.1	1078	2	329	-1646	-7	-3	multi-exon	FALSE	canonical	1	39247698	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	448	876	35.0	5	True	AATAAA	-14
PB.635.54	chr1	-	2633	17	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-23	no_combination_of_known_junctions	FALSE	canonical	1	36991	junction_8	1634307.9014478498	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	447	2444	40.0	-1	True	AATAAA	-22
PB.635.55	chr1	-	2542	18	full-splice_match	CSDE1	ENST00000261443.9	3228	18	-31	717	-2	-55	multi-exon	FALSE	canonical	1	94441	junction_17	1585338.5915023573	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	82	2385	75.0	616	False	NA	NA
PB.2311.3	chr11	-	2337	3	novel_in_catalog	RPS25	novel	508	5	NA	NA	-31	-3	intron_retention	FALSE	canonical	1	15735	junction_1	19615981.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	472	900	35.0	8743	False	AATAAA	-14
PB.11276.1	chr8	+	2683	1	antisense	novelGene_ZNF706_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	107	321	2361	2681	90.0	-6747	False	NA	NA
PB.3892.9	chr15	+	4626	19	novel_in_catalog	TCF12	novel	4786	21	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	7478	junction_3	160107.2485066217	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	518	2257	40.0	-31	True	AATAAA	-26
PB.3892.8	chr15	+	4782	21	full-splice_match	TCF12	ENST00000333725.9	4719	21	-57	-6	12	0	multi-exon	FALSE	canonical	1	82047	junction_15	140878.27590777614	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	293	2413	40.0	-38	True	AATAAA	-26
PB.3892.7	chr15	+	4215	20	full-splice_match	TCF12	ENST00000267811.9	6061	20	4	1842	4	-74	multi-exon	FALSE	canonical	1	296234	junction_6	96849.34465329569	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	301	2349	80.0	-46	True	NA	NA
PB.3892.6	chr15	+	6102	20	full-splice_match	TCF12	ENST00000267811.9	6061	20	33	-74	-17	74	multi-exon	FALSE	canonical	1	296234	junction_6	96849.34465329569	NA	2	NA	TRUE	NA	NA	NA	C	coding	682	2049	272	2320	25.0	-17	True	AATAAA	-21
PB.3892.5	chr15	+	4840	22	novel_not_in_catalog	TCF12	novel	4786	21	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	18	junction_4	181198.65343502603	NA	3	2	TRUE	NA	NA	NA	C	coding	604	1815	658	2472	35.0	-49	True	AATAAA	-25
PB.3892.4	chr15	+	5592	21	novel_in_catalog	TCF12	novel	4786	21	NA	NA	-51	-584	no_combination_of_known_junctions	FALSE	canonical	1	17878	junction_5	155449.90836742235	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	594	2468	65.0	0	True	ATTAAA	-22
PB.3892.3	chr15	+	4841	21	novel_in_catalog	TCF12	novel	4786	21	NA	NA	-55	0	no_combination_of_known_junctions	FALSE	canonical	1	17878	junction_5	155449.90836742235	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	598	2472	40.0	-4	True	AATAAA	-26
PB.3892.2	chr15	+	1764	16	incomplete-splice_match	TCF12	ENST00000267811.9	6061	20	28	27667	-22	-12	3prime_fragment	FALSE	canonical	1	296234	junction_6	94582.72433847995	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1488	277	1764	65.0	-22	True	NA	NA
PB.3892.1	chr15	+	4670	20	full-splice_match	TCF12	ENST00000267811.9	6061	20	84	1307	15	32	multi-exon	FALSE	canonical	1	296234	junction_6	96849.34465329569	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	221	2269	40.0	34	True	AGTAAA	-30
PB.7113.7	chr2	-	2893	11	novel_in_catalog	STK25	novel	4619	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	76219	junction_10	391737.3619195519	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	1512	2249	10.0	-31	True	AATAAA	-17
PB.11702.1	chr9	+	2587	11	full-splice_match	FKTN	ENST00000602661.5	2576	11	-12	1	-12	-1	multi-exon	FALSE	canonical	1	14531	junction_1	25992.808189959007	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	229	1614	35.0	-14	True	AATATA	-13
PB.8127.7	chr3	+	2419	20	novel_in_catalog	RBM6	novel	2260	17	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	50892	junction_2	229232.1970411569	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	376	2304	15.0	0	True	AATAAA	-16
PB.854.15	chr1	-	2558	8	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	2	-14	any annotated donor/acceptor	FALSE	canonical	1	8097	junction_7	49937.43933224074	NA	1	1	TRUE	NA	NA	NA	C	coding	283	852	69	920	80.0	-9	True	NA	NA
PB.854.14	chr1	-	2551	9	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	-2	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48817.05105784632	NA	1	1	TRUE	NA	NA	NA	C	coding	332	999	64	1062	80.0	-4	True	NA	NA
PB.854.17	chr1	-	2227	8	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	1	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	61958.89223097679	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	61	726	80.0	-1	True	NA	NA
PB.11824.7	chr9	+	2688	1	novel_in_catalog	GLE1	novel	3321	16	NA	NA	0	-26231	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	135	408	76	483	80.0	12	True	NA	NA
PB.854.11	chr1	-	3732	7	novel_in_catalog	SLAMF6	novel	2743	8	NA	NA	2	-14	intron_retention	FALSE	canonical	1	91389	junction_4	26742.688174631126	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	69	884	80.0	-9	True	NA	NA
PB.854.10	chr1	-	4064	6	novel_in_catalog	SLAMF6	novel	2743	8	NA	NA	-1	-14	intron_retention	FALSE	canonical	1	91389	junction_3	28828.554222506544	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	63	866	80.0	-3	True	NA	NA
PB.854.13	chr1	-	2572	9	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	0	-14	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	48817.05105784632	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	71	1069	80.0	-11	True	NA	NA
PB.854.12	chr1	-	3390	6	novel_in_catalog	SLAMF6	novel	2743	8	NA	NA	2	-14	intron_retention	FALSE	canonical	1	6622	junction_5	57234.18605134522	NA	2	NA	TRUE	NA	NA	NA	C	coding	160	483	60	542	80.0	0	True	NA	NA
PB.2826.5	chr12	+	4774	28	novel_not_in_catalog	APAF1	novel	5444	27	NA	NA	-31	0	intron_retention	FALSE	non_canonical	0	0	junction_27	35173.6459154813	NA	0	NA	TRUE	NA	NA	NA	C	coding	1248	3747	609	4355	35.0	-21	True	AATAAA	-19
PB.2826.4	chr12	+	4382	17	incomplete-splice_match	APAF1	ENST00000551964.5	5444	27	114	32664	-45	-11898	3prime_fragment	FALSE	canonical	1	62678	junction_7	25594.700087295296	NA	2	1	TRUE	NA	NA	NA	C	coding	881	2646	623	3268	10.0	-35	True	NA	NA
PB.2826.7	chr12	+	2802	16	incomplete-splice_match	APAF1	ENST00000551964.5	5444	27	128	46764	-31	15066	3prime_fragment	FALSE	canonical	1	62678	junction_7	23270.925714862882	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2193	609	2801	55.0	-21	True	NA	NA
PB.2826.6	chr12	+	3270	19	incomplete-splice_match	APAF1	ENST00000357310.5	7055	26	-31	26772	-31	-4107	3prime_fragment	FALSE	canonical	1	47272	junction_17	30410.131614204	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2661	609	3269	45.0	-21	True	NA	NA
PB.2826.1	chr12	+	7128	26	full-splice_match	APAF1	ENST00000357310.5	7055	26	-73	0	-73	0	multi-exon	TRUE	canonical	1	47272	junction_17	28720.701567364264	NA	4	NA	TRUE	NA	NA	NA	C	coding	1205	3618	651	4268	35.0	-63	True	AATAAA	-19
PB.2826.3	chr12	+	3717	22	incomplete-splice_match	APAF1	ENST00000357310.5	7055	26	-62	12111	-62	-9248	3prime_fragment	FALSE	canonical	1	47272	junction_17	29880.170636482417	NA	0	NA	TRUE	NA	NA	NA	C	coding	1026	3078	640	3717	40.0	-52	True	NA	NA
PB.2826.2	chr12	+	4353	27	novel_not_in_catalog	APAF1	novel	5444	27	NA	NA	-66	14	intron_retention	FALSE	canonical	1	1387	junction_23	35319.91245733889	NA	1	NA	TRUE	NA	NA	NA	C	coding	1231	3696	644	4339	35.0	-56	True	AATAAA	-14
PB.8127.6	chr3	+	3899	20	novel_in_catalog	RBM6	novel	2260	17	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	788	junction_6	259953.31958872284	NA	0	NA	TRUE	NA	NA	NA	C	coding	966	2901	884	3784	15.0	-4	True	AATAAA	-16
PB.11722.5	chr9	-	5093	14	novel_not_in_catalog	PTBP3	novel	7995	14	NA	NA	1	-171	any annotated donor/acceptor	FALSE	canonical	1	460	junction_1	196762.5745384072	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	283	1641	30.0	-45	False	ATTAAA	-15
PB.5251.10	chr17	-	2401	9	full-splice_match	RECQL5	ENST00000340830.9	1749	9	-7	-645	-7	645	multi-exon	FALSE	canonical	1	14016	junction_1	50666.91752021234	NA	2	NA	TRUE	NA	NA	NA	C	coding	435	1308	168	1475	10.0	-16	True	AATAAA	-16
PB.5251.11	chr17	-	3252	3	novel_in_catalog	RECQL5	novel	3576	20	NA	NA	2	-9533	intron_retention	FALSE	canonical	1	147823	junction_1	9464.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	260	783	631	1413	10.0	-7	True	AATAAA	-18
PB.465.52	chr1	-	1839	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-29	-189	-2	189	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	102	1310	30.0	0	True	NA	NA
PB.1187.8	chr1	-	2619	19	novel_not_in_catalog	NUP133	novel	5207	26	NA	NA	18324	100	any annotated donor/acceptor	FALSE	canonical	1	2012	junction_2	133195.71223662654	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	358	2394	5.0	NA	False	NA	NA
PB.8833.10	chr4	-	3019	1	novel_in_catalog	NUP54	novel	1938	10	NA	NA	0	-1182	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	AAAACA	-15
PB.1041.2	chr1	-	2150	1	incomplete-splice_match	RABIF	ENST00000367262.3	2430	2	8026	3	8026	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	8137	False	AATAAA	-17
PB.11722.6	chr9	-	7002	14	full-splice_match	PTBP3	ENST00000374257.5	7240	14	66	172	13	-172	multi-exon	FALSE	canonical	1	259769	junction_12	122928.3672971026	NA	2	1	TRUE	NA	NA	NA	C	coding	524	1575	184	1758	30.0	17	False	ATTAAA	-14
PB.732.3	chr1	+	3961	20	incomplete-splice_match	SETDB1	ENST00000271640.9	4437	22	12	880	2	4	3prime_fragment	FALSE	canonical	1	56183	junction_11	57341.31854806815	NA	0	NA	TRUE	NA	NA	NA	B	coding	1261	3783	179	3961	30.0	-21	True	TATAAA	-22
PB.10144.1	chr6	-	1728	4	full-splice_match	SNX3	ENST00000230085.12	1755	4	17	10	1	-10	multi-exon	FALSE	canonical	1	1846677	junction_3	175139.63584205857	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	323	811	50.0	-204	False	ATTAAA	-10
PB.10144.2	chr6	-	1453	4	full-splice_match	SNX3	ENST00000349379.5	890	4	210	-773	-70	-10	multi-exon	FALSE	canonical	1	105803	junction_3	963213.3310644232	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	114	536	50.0	5	True	ATTAAA	-10
PB.10144.3	chr6	-	1243	4	full-splice_match	SNX3	ENST00000230085.12	1755	4	220	292	-76	-1	multi-exon	FALSE	canonical	1	1846677	junction_3	175139.63584205857	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	120	608	15.0	-1	True	AATAAA	-25
PB.1108.10	chr1	-	3046	19	novel_in_catalog	INTS7	novel	4447	21	NA	NA	110	-9	no_combination_of_known_junctions	FALSE	canonical	1	2918	junction_2	60394.03753734079	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	52	2763	75.0	134	False	NA	NA
PB.732.1	chr1	+	1385	9	novel_in_catalog	SETDB1	novel	587	5	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	21544	junction_1	77231.04536025328	NA	0	NA	TRUE	NA	NA	NA	B	coding	397	1194	36	1229	20.0	-47	False	AATAAA	-20
PB.4926.2	chr17	+	2849	17	novel_not_in_catalog	TADA2A	novel	4253	16	NA	NA	-6	-6	any annotated donor/acceptor	FALSE	canonical	1	6842	junction_16	53953.89808029253	NA	0	NA	TRUE	NA	NA	NA	B	coding	443	1332	147	1478	20.0	15	True	AATAAA	-17
PB.9356.16	chr5	-	3571	13	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	213	-3	intron_retention	FALSE	canonical	1	5537	junction_6	114374.3448340677	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	15	800	35.0	NA	False	AATAAA	-18
PB.4926.1	chr17	+	2310	17	novel_not_in_catalog	TADA2A	novel	4253	16	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	6437	junction_16	54027.10944617873	NA	2	NA	TRUE	NA	NA	NA	B	coding	443	1332	162	1493	25.0	0	True	ATTAAA	-15
PB.6944.1	chr2	+	1968	3	novel_in_catalog	CASP8	novel	1630	9	NA	NA	8	-889	combination_of_known_junctions	FALSE	canonical	1	32321	junction_1	4004.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-55	False	NA	NA
PB.1674.26	chr10	-	4167	22	full-splice_match	EIF3A	ENST00000369144.7	6646	22	-3	2482	-3	-359	multi-exon	FALSE	canonical	1	780023	junction_21	513062.870659706	NA	0	NA	TRUE	NA	NA	NA	C	coding	1345	4035	132	4166	60.0	9	True	NA	NA
PB.1674.27	chr10	-	3788	20	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	-1	2533	-1	-2533	3prime_fragment	FALSE	canonical	1	780023	junction_19	460613.96056351304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3639	149	3787	40.0	-8	True	AAAAAG	-19
PB.5892.7	chr19	-	3277	1	novel_in_catalog	LINC00662	novel	2053	3	NA	NA	42	-131	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-6	True	NA	NA
PB.5892.6	chr19	-	1808	3	full-splice_match	LINC00662	ENST00000590523.1	2053	3	240	5	240	-5	multi-exon	FALSE	canonical	1	13788	junction_1	43732.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	NA	NA
PB.5892.1	chr19	-	2844	5	novel_not_in_catalog	LINC00662	novel	562	3	NA	NA	19	2026	any annotated donor/acceptor	TRUE	canonical	1	5217	junction_1	48257.31961254686	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-29	True	NA	NA
PB.5892.3	chr19	-	1482	5	novel_not_in_catalog	LINC00662	novel	562	3	NA	NA	16	6	any annotated donor/acceptor	TRUE	canonical	1	73386	junction_1	20506.128291318182	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-32	True	NA	NA
PB.12118.1	chrX	+	4458	21	novel_in_catalog	HEPH	novel	6013	21	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	1	64647	junction_1	21983.077631385007	NA	0	NA	TRUE	NA	NA	NA	B	coding	1158	3477	268	3744	35.0	-30	True	ATTAAA	-19
PB.12118.3	chrX	+	4095	19	novel_in_catalog	HEPH	novel	6013	21	NA	NA	-20	0	no_combination_of_known_junctions	FALSE	canonical	1	13419	junction_15	31398.007756105628	NA	0	NA	TRUE	NA	NA	NA	B	coding	1047	3144	238	3381	35.0	0	True	ATTAAA	-19
PB.12118.2	chrX	+	4244	20	novel_in_catalog	HEPH	novel	6013	21	NA	NA	-49	0	no_combination_of_known_junctions	FALSE	canonical	1	4414	junction_11	31712.533181308983	NA	1	1	TRUE	NA	NA	NA	B	coding	1087	3264	267	3530	35.0	-29	True	ATTAAA	-19
PB.263.11	chr1	-	1925	7	novel_in_catalog	YARS	novel	3238	13	NA	NA	-2	460	intron_retention	FALSE	canonical	1	1113252	junction_3	132319.43737116712	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	76	954	90.0	38	True	NA	NA
PB.263.10	chr1	-	1969	13	full-splice_match	YARS	ENST00000373477.8	3238	13	823	446	-13	-4	multi-exon	FALSE	canonical	1	1113252	junction_9	212210.4848634304	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	87	1673	25.0	27	True	AATATA	-13
PB.1674.28	chr10	-	3669	19	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	6	6199	6	-6199	3prime_fragment	FALSE	canonical	1	780023	junction_18	371533.59981799644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1176	3528	142	3669	40.0	-1	True	NA	NA
PB.1674.29	chr10	-	2637	17	incomplete-splice_match	EIF3A	ENST00000541549.2	4495	23	14	14162	-5	6921	3prime_fragment	FALSE	canonical	1	780023	junction_16	324971.0152878782	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2502	134	2635	45.0	7	True	NA	NA
PB.5935.5	chr19	+	2275	6	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-20	3	no_combination_of_known_junctions	TRUE	canonical	1	4125	junction_1	27099.792747546984	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	523	1986	30.0	-13	True	AATAAA	-27
PB.5935.4	chr19	+	2277	4	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-20	7	intron_retention	FALSE	canonical	1	45462	junction_1	17855.89383555656	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	147	1031	25.0	-13	True	AATAAA	-31
PB.5935.7	chr19	+	2402	5	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-18	7	intron_retention	FALSE	canonical	1	4125	junction_1	29758.95690796302	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	521	1585	25.0	-11	True	AATAAA	-31
PB.5935.6	chr19	+	3623	1	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-18	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	294	885	1213	2097	35.0	-11	True	AATAAA	-23
PB.5935.1	chr19	+	2218	4	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-32	5	intron_retention	FALSE	canonical	1	45462	junction_1	4893.734384110177	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	159	1223	30.0	-4607	False	AATAAA	-29
PB.7368.2	chr20	-	2465	11	novel_in_catalog	AURKA	novel	2238	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	14243	junction_9	158450.16924118446	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	486	1697	15.0	0	True	AATAAA	-15
PB.5935.3	chr19	+	2383	3	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-20	5	intron_retention	FALSE	canonical	1	45462	junction_1	20795.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	147	1031	30.0	-13	True	AATAAA	-29
PB.5935.2	chr19	+	2035	5	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-27	7	intron_retention	FALSE	canonical	1	45462	junction_1	15650.285562490546	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	154	1218	25.0	-4602	False	AATAAA	-31
PB.6489.45	chr2	-	4610	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-66	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	0	NA	TRUE	NA	NA	NA	C	coding	1067	3204	523	3726	15.0	-1	True	AATAAA	-14
PB.6489.44	chr2	-	4647	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-47	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	5	1	TRUE	NA	NA	NA	C	coding	1067	3204	560	3763	15.0	18	True	AATAAA	-14
PB.6489.47	chr2	-	4481	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	17	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_25	364577.93375179253	NA	2	1	TRUE	NA	NA	NA	C	coding	1067	3204	394	3597	15.0	-21	True	AATAAA	-14
PB.6489.46	chr2	-	4608	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	5748	junction_5	372274.25281774893	NA	10	NA	TRUE	NA	NA	NA	C	coding	1002	3009	716	3724	15.0	-13	True	AATAAA	-14
PB.5935.9	chr19	+	2128	4	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-15	4	intron_retention	FALSE	canonical	1	45462	junction_1	17556.472715845353	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	142	1314	30.0	-8	True	AATAAA	-28
PB.5935.8	chr19	+	2648	4	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-17	5	intron_retention	FALSE	canonical	1	4125	junction_1	34116.36810486525	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	520	1404	30.0	-10	True	AATAAA	-29
PB.7368.9	chr20	-	1875	10	full-splice_match	AURKA	ENST00000395911.5	2145	10	0	270	0	5	multi-exon	FALSE	canonical	1	1944	junction_9	157953.86665599624	NA	2	1	TRUE	NA	NA	NA	C	coding	403	1212	166	1377	10.0	-1	True	AATAAA	-20
PB.7368.8	chr20	-	2032	9	full-splice_match	AURKA	ENST00000395915.7	2114	9	82	0	1	0	multi-exon	FALSE	canonical	1	110603	junction_8	145395.03155622058	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	53	1264	15.0	0	True	AATAAA	-15
PB.5783.20	chr19	-	2220	8	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	-3	intron_retention	FALSE	canonical	1	902151	junction_5	360175.51162918744	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	636	1343	20.0	-6	True	AATAAA	-13
PB.11499.5	chr9	-	2306	12	novel_not_in_catalog	SMU1	novel	7122	12	NA	NA	-14	-4787	any annotated donor/acceptor	FALSE	canonical	1	9563	junction_7	193787.40925739787	NA	3	NA	TRUE	NA	NA	NA	C	coding	251	756	809	1564	35.0	-3	True	AATAAA	-19
PB.10364.1	chr7	-	1402	2	full-splice_match	PSMG3	ENST00000288607.2	1391	2	-18	7	-18	-7	multi-exon	FALSE	canonical	1	802990	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	122	369	673	1041	30.0	-10	True	ATTAAA	-16
PB.4270.2	chr16	-	7180	27	novel_not_in_catalog	MARF1	novel	7743	27	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	11415	junction_24	71531.76955595474	NA	3	NA	TRUE	NA	NA	NA	C	coding	1561	4686	190	4875	25.0	0	True	AATAAA	-19
PB.3366.9	chr14	+	3940	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	35	1829	0	2	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	120	2240	10.0	0	True	ATTAAA	-18
PB.3366.8	chr14	+	4136	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	35	1633	0	198	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	120	2240	10.0	0	True	AATAAA	-14
PB.4270.6	chr16	-	7778	27	full-splice_match	MARF1	ENST00000396368.7	7743	27	-37	2	-37	0	multi-exon	FALSE	canonical	1	108748	junction_26	51465.972743703394	NA	1	NA	TRUE	NA	NA	NA	C	coding	1741	5226	248	5473	25.0	-25	False	AATAAA	-19
PB.4270.7	chr16	-	7693	27	novel_not_in_catalog	MARF1	novel	7743	27	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	32635	junction_17	59964.4881947399	NA	0	NA	TRUE	NA	NA	NA	C	coding	1732	5199	190	5388	25.0	0	True	AATAAA	-19
PB.3366.5	chr14	+	5553	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	28	223	-7	-223	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	127	2247	45.0	-7	True	AATAAA	-26
PB.4270.9	chr16	-	7259	26	novel_not_in_catalog	MARF1	novel	7743	27	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	18760	junction_19	70583.3275571505	NA	48	4	TRUE	NA	NA	NA	C	coding	1589	4770	186	4955	20.0	4	True	AATAAA	-18
PB.3366.7	chr14	+	4813	15	novel_not_in_catalog	G2E3	novel	5804	15	NA	NA	0	1	intron_retention	FALSE	canonical	1	18553	junction_7	43632.606153423796	NA	3	NA	TRUE	NA	NA	NA	C	coding	290	873	2242	3114	10.0	0	True	ATTAAA	-17
PB.3366.6	chr14	+	4942	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	31	831	-4	-831	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	124	2244	25.0	-4	True	AGTAAA	-21
PB.3366.1	chr14	+	2504	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	35	3265	0	126	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	120	2240	20.0	0	True	TATAAA	-11
PB.3366.3	chr14	+	3468	14	novel_in_catalog	G2E3	novel	5804	15	NA	NA	-11	123	intron_retention	FALSE	canonical	1	39855	junction_10	36406.16420788327	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	2335	3207	30.0	-11	True	TATAAA	-8
PB.2087.1	chr11	-	1525	5	full-splice_match	MRPL11	ENST00000430466.6	1527	5	1	1	1	-1	multi-exon	FALSE	canonical	1	181010	junction_4	489708.0316956727	NA	0	NA	TRUE	NA	NA	NA	A	coding	166	501	94	594	35.0	-6	True	NA	NA
PB.5628.4	chr19	+	2508	1	full-splice_match	TNFAIP8L1	ENST00000598107.1	2946	1	-34	472	-15	-472	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-34	True	NA	NA
PB.5628.5	chr19	+	2469	3	novel_not_in_catalog	TNFAIP8L1	novel	3814	2	NA	NA	-15	-47	intron_retention	FALSE	non_canonical	0	0	junction_2	36236.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	186	561	131	691	45.0	-34	True	ATTAAA	-12
PB.5628.6	chr19	+	2022	2	full-splice_match	TNFAIP8L1	ENST00000327473.8	3814	2	-7	1799	-7	-1799	multi-exon	FALSE	canonical	1	72472	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	123	683	100.0	-26	True	NA	NA
PB.5628.1	chr19	+	2931	3	novel_not_in_catalog	TNFAIP8L1	novel	3814	2	NA	NA	-27	-47	intron_retention	FALSE	non_canonical	0	0	junction_2	36236.0	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	143	703	45.0	-1461	False	ATTAAA	-12
PB.5628.2	chr19	+	2658	3	novel_not_in_catalog	TNFAIP8L1	novel	3814	2	NA	NA	-16	-50	intron_retention	FALSE	non_canonical	0	0	junction_2	36236.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	132	692	40.0	-1450	False	ATTAAA	-9
PB.5628.3	chr19	+	2577	4	novel_not_in_catalog	TNFAIP8L1	novel	3814	2	NA	NA	-16	-40	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	34163.62843076765	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	132	692	45.0	-1450	False	ATTAAA	-19
PB.9661.1	chr5	-	2481	5	full-splice_match	ZNF354A	ENST00000335815.6	2484	5	-1	4	-1	-4	multi-exon	FALSE	canonical	1	41116	junction_4	39613.7651927963	NA	2	NA	TRUE	NA	NA	NA	A	coding	605	1818	200	2017	10.0	12	True	AATAAA	-20
PB.11663.1	chr9	+	3165	17	novel_in_catalog	C9orf3	novel	1966	8	NA	NA	-39	-2	combination_of_known_junctions	TRUE	canonical	1	15514	junction_11	115397.95942924464	NA	3	NA	TRUE	NA	NA	NA	C	coding	819	2460	226	2685	25.0	-56	True	AATAAA	-21
PB.9661.3	chr5	-	2596	6	novel_not_in_catalog	AC113348.2	novel	1653	8	NA	NA	-1379	-16991	any annotated donor/acceptor	FALSE	canonical	1	171	junction_4	59126.89402496972	NA	2	NA	TRUE	NA	NA	NA	B	coding	563	1692	441	2132	10.0	1	True	AATAAA	-20
PB.9661.2	chr5	-	2628	6	novel_not_in_catalog	AC113348.2	novel	1653	8	NA	NA	-1390	-16990	any annotated donor/acceptor	FALSE	canonical	1	171	junction_4	59362.42168106016	NA	2	NA	TRUE	NA	NA	NA	B	coding	600	1803	361	2163	10.0	-10	True	AATAAA	-21
PB.465.56	chr1	-	1652	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-30	-1	-3	1	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	103	1311	25.0	-1	True	AATATA	-25
PB.9720.9	chr6	+	2143	17	novel_not_in_catalog	RIOK1	novel	2810	17	NA	NA	16	-338	any annotated donor/acceptor	FALSE	canonical	1	8634	junction_15	143405.1239600594	NA	2	1	TRUE	NA	NA	NA	C	coding	548	1647	195	1841	15.0	-1	True	AATAAA	-17
PB.9720.8	chr6	+	2198	17	novel_in_catalog	RIOK1	novel	2810	17	NA	NA	16	-331	combination_of_known_junctions	FALSE	canonical	1	26060	junction_2	140385.6630196433	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	539	1933	30.0	-1	True	AATAAA	-24
PB.8712.7	chr4	+	3142	20	novel_in_catalog	NCAPG	novel	4661	21	NA	NA	-42	60	no_combination_of_known_junctions	FALSE	canonical	1	14366	junction_18	138834.46242064255	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	99	3059	30.0	-12	True	AATAAA	-27
PB.8712.6	chr4	+	3164	21	novel_not_in_catalog	NCAPG	novel	4661	21	NA	NA	-43	60	any annotated donor/acceptor	FALSE	canonical	1	4751	junction_10	146240.97601082947	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2982	100	3081	30.0	-13	True	AATAAA	-27
PB.8712.1	chr4	+	2050	14	incomplete-splice_match	NCAPG	ENST00000251496.6	4661	21	33	10541	33	-2840	3prime_fragment	TRUE	canonical	1	167764	junction_4	64974.90730114895	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	144	2048	55.0	-57	False	NA	NA
PB.8712.3	chr4	+	3489	18	incomplete-splice_match	NCAPG	ENST00000251496.6	4661	21	60	4047	60	-2633	intron_retention	FALSE	canonical	1	167764	junction_4	83670.7045882702	NA	1	NA	TRUE	NA	NA	NA	C	coding	949	2850	117	2966	5.0	-30	True	GATAAA	-17
PB.12147.4	chrX	-	8351	5	full-splice_match	RLIM	ENST00000349225.2	3478	5	9	-4882	9	-19	multi-exon	FALSE	canonical	1	32435	junction_4	37999.33350731299	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1875	273	2147	50.0	13	False	AATAAA	-13
PB.9720.1	chr6	+	1722	17	novel_not_in_catalog	RIOK1	novel	2810	17	NA	NA	-49	2817	any annotated donor/acceptor	TRUE	canonical	1	504	junction_1	144380.3530318768	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1590	133	1722	65.0	-512	False	AAGAAA	-25
PB.8127.1	chr3	+	2287	19	full-splice_match	RBM6	ENST00000422955.5	2324	19	37	0	-1	0	multi-exon	FALSE	canonical	1	50892	junction_2	240713.08072710925	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	367	2172	15.0	-13	True	AATAAA	-16
PB.9720.3	chr6	+	2444	1	novel_in_catalog	RIOK1	novel	2810	17	NA	NA	7	-10605	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-10	True	NA	NA
PB.9720.2	chr6	+	2179	17	full-splice_match	RIOK1	ENST00000379834.6	2810	17	299	332	2	-332	multi-exon	FALSE	canonical	1	207744	junction_1	111506.86094458423	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	209	1915	25.0	-15	True	AATAAA	-23
PB.9720.5	chr6	+	1829	17	full-splice_match	RIOK1	ENST00000379834.6	2810	17	310	671	13	-671	multi-exon	FALSE	canonical	1	207744	junction_1	111506.86094458423	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1632	198	1829	70.0	-4	True	AAAAAG	-25
PB.9720.4	chr6	+	2400	17	novel_in_catalog	RIOK1	novel	2810	17	NA	NA	7	-138	combination_of_known_junctions	FALSE	canonical	1	26060	junction_2	140385.6630196433	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	548	1942	15.0	-10	True	TATAAA	-16
PB.9720.7	chr6	+	2496	17	full-splice_match	RIOK1	ENST00000379834.6	2810	17	312	2	15	-2	multi-exon	FALSE	canonical	1	207744	junction_1	111506.86094458423	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	196	1902	30.0	-2	True	CATAAA	-15
PB.9720.6	chr6	+	2368	17	full-splice_match	RIOK1	ENST00000379834.6	2810	17	305	137	8	-137	multi-exon	FALSE	canonical	1	207744	junction_1	111506.86094458423	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	203	1909	10.0	-9	True	TATAAA	-17
PB.5329.4	chr17	-	2378	12	novel_not_in_catalog	P4HB	novel	2603	11	NA	NA	6	0	intron_retention	TRUE	non_canonical	0	0	junction_11	2579561.944565433	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	38	1525	10.0	9459	False	AATAAA	-20
PB.1684.5	chr10	+	4218	19	full-splice_match	SEC23IP	ENST00000369075.7	7168	19	25	2925	-9	-769	multi-exon	FALSE	canonical	1	223811	junction_2	61365.87819360383	NA	25	2	TRUE	NA	NA	NA	C	coding	1000	3003	48	3050	25.0	6	True	AATAAA	-31
PB.11645.9	chr9	-	2554	15	full-splice_match	SPTLC1	ENST00000262554.6	1894	15	-10	-650	-2	-77	multi-exon	FALSE	canonical	1	12612	junction_13	224508.00974620946	NA	16	1	TRUE	NA	NA	NA	C	coding	473	1422	17	1438	30.0	19	True	AATAAA	-15
PB.11645.8	chr9	-	2723	16	novel_in_catalog	SPTLC1	novel	2042	16	NA	NA	-9	-60	combination_of_known_junctions	FALSE	canonical	1	7256	junction_15	261055.23062255536	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	634	1590	30.0	12	True	AATAAA	-32
PB.5329.5	chr17	-	2348	12	novel_not_in_catalog	P4HB	novel	2603	11	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	2579561.944565433	NA	5	NA	TRUE	NA	NA	NA	C	coding	508	1527	65	1591	10.0	-1	True	AATAAA	-20
PB.8712.4	chr4	+	3825	21	full-splice_match	NCAPG	ENST00000251496.6	4661	21	71	765	-49	649	multi-exon	FALSE	canonical	1	167764	junction_4	128153.98838740838	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	106	3153	20.0	-19	True	CATAAA	-17
PB.11645.4	chr9	-	4217	13	novel_in_catalog	SPTLC1	novel	2042	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	12612	junction_11	220371.23388555745	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	15	1013	25.0	68	False	AATAAA	-15
PB.11645.6	chr9	-	2813	16	novel_in_catalog	SPTLC1	novel	2042	16	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	5022	junction_5	266701.5184319896	NA	2	1	TRUE	NA	NA	NA	C	coding	365	1098	16	1113	25.0	20	True	AATAAA	-12
PB.5329.6	chr17	-	2250	11	novel_not_in_catalog	P4HB	novel	2603	11	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_10	2663504.596776332	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	66	1397	10.0	-2	True	AATAAA	-20
PB.11645.3	chr9	-	2702	15	full-splice_match	SPTLC1	ENST00000262554.6	1894	15	-11	-797	-3	-56	multi-exon	FALSE	canonical	1	12612	junction_13	224508.00974620946	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	18	1439	10.0	18	True	GATAAA	-14
PB.11645.2	chr9	-	3104	14	novel_in_catalog	SPTLC1	novel	2042	16	NA	NA	-2	3	intron_retention	FALSE	canonical	1	12612	junction_12	228917.09238887153	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	17	1015	30.0	19	True	AATAAA	-18
PB.12147.2	chrX	-	8311	4	full-splice_match	RLIM	ENST00000332687.10	8317	4	-8	14	-8	-14	multi-exon	FALSE	canonical	1	67475	junction_1	26827.238102760824	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	228	2102	45.0	-4	True	AATAAA	-18
PB.5454.16	chr18	+	4877	23	novel_not_in_catalog	FHOD3	novel	4967	25	NA	NA	0	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	32250.024364684243	NA	28	2	TRUE	NA	NA	NA	C	coding	1258	3777	570	4346	25.0	1	True	AATAAA	-21
PB.5329.1	chr17	-	3465	10	incomplete-splice_match	P4HB	ENST00000575069.5	2453	11	-50	-3	8	1	intron_retention	FALSE	canonical	1	5983544	junction_9	1368661.9256366263	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	2054	2611	10.0	9351	False	AATAAA	-21
PB.6812.8	chr2	-	6296	15	novel_in_catalog	IFIH1	novel	3544	16	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	173522	junction_7	52776.04788492636	NA	2	NA	TRUE	NA	NA	NA	C	coding	746	2241	426	2666	35.0	19	True	AATAAA	-19
PB.6812.9	chr2	-	3720	17	novel_not_in_catalog	IFIH1	novel	3544	16	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	2035	junction_16	96211.12456143	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	1240	3600	35.0	-16	True	AATAAA	-19
PB.1840.1	chr11	+	6391	5	full-splice_match	NCR3LG1	ENST00000338965.8	6438	5	28	19	28	-19	multi-exon	TRUE	canonical	1	31787	junction_1	10914.293206044082	NA	1	NA	TRUE	NA	NA	NA	A	coding	454	1365	217	1581	95.0	-16	True	NA	NA
PB.9147.4	chr5	+	2242	1	incomplete-splice_match	ANKRD33B	ENST00000296657.6	9188	4	90263	844	90263	-844	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.9147.5	chr5	+	1830	1	incomplete-splice_match	ANKRD33B	ENST00000296657.6	9188	4	91518	1	91518	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-20
PB.9147.2	chr5	+	3933	1	incomplete-splice_match	ANKRD33B	ENST00000296657.6	9188	4	88572	844	88572	-844	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.9147.3	chr5	+	4064	1	incomplete-splice_match	ANKRD33B	ENST00000296657.6	9188	4	89284	1	89284	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	52	159	156	314	30.0	NA	False	AATAAA	-20
PB.9147.1	chr5	+	6389	1	incomplete-splice_match	ANKRD33B	ENST00000296657.6	9188	4	86959	1	86959	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	149	450	989	1438	30.0	NA	False	AATAAA	-20
PB.5077.18	chr17	+	2646	13	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	25	intron_retention	FALSE	canonical	1	25716	junction_12	288646.8586651343	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	1669	2619	40.0	0	True	AATAAA	-6
PB.5077.19	chr17	+	2619	13	full-splice_match	CDK5RAP3	ENST00000580287.5	2609	13	-5	-5	0	3	multi-exon	FALSE	canonical	1	25716	junction_12	269463.94338238926	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	1626	2576	25.0	0	True	AATAAA	-22
PB.10049.14	chr6	+	1812	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	508	2768	508	-2768	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	646	1167	45.0	-8	True	ATTAAA	-16
PB.10049.15	chr6	+	4242	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	534	312	534	-312	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	3	NA	TRUE	NA	NA	NA	C	coding	173	522	620	1141	35.0	-3	True	AATACA	-18
PB.10049.12	chr6	+	4337	5	novel_not_in_catalog	PTP4A1	novel	4711	8	NA	NA	-757	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	770643.0814016629	NA	26	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	1	True	ATTAAA	-18
PB.10049.13	chr6	+	2064	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	469	2555	469	-2555	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	685	1206	25.0	1	True	AGTAAA	-14
PB.10049.10	chr6	+	2589	6	novel_not_in_catalog	PTP4A1	novel	4711	8	NA	NA	-758	-4	any annotated donor/acceptor	FALSE	canonical	1	7835	junction_1	709998.2381300956	NA	0	NA	TRUE	NA	NA	NA	B	coding	173	522	784	1305	30.0	0	True	AATAAA	-25
PB.10049.11	chr6	+	2340	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	468	2280	468	-2280	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	686	1207	40.0	0	True	GATAAA	-16
PB.5077.10	chr17	+	2578	13	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23067	44	intron_retention	FALSE	canonical	1	83157	junction_3	262229.39476545254	NA	0	NA	TRUE	NA	NA	NA	B	coding	419	1260	1041	2300	20.0	-1	True	AATAAA	-25
PB.5077.11	chr17	+	3708	10	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	25	intron_retention	FALSE	canonical	1	179310	junction_9	239880.6308777784	NA	3	NA	TRUE	NA	NA	NA	B	coding	149	450	3000	3449	40.0	0	True	AATAAA	-6
PB.5077.12	chr17	+	3598	9	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	36	intron_retention	FALSE	canonical	1	179310	junction_8	223530.4698807511	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	2483	3328	20.0	0	True	AATAAA	-17
PB.5077.13	chr17	+	3238	10	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	44	intron_retention	FALSE	canonical	1	179310	junction_9	220926.05340237854	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	2115	2960	20.0	0	True	AATAAA	-25
PB.5077.14	chr17	+	2502	10	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	-557	intron_retention	FALSE	canonical	1	83157	junction_2	243186.71450665887	NA	0	NA	TRUE	NA	NA	NA	B	coding	208	624	1878	2501	35.0	0	True	NA	NA
PB.5077.15	chr17	+	2972	13	novel_not_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	44	intron_retention	FALSE	canonical	1	11150	junction_9	267194.4141866659	NA	0	NA	TRUE	NA	NA	NA	B	coding	149	450	2245	2694	20.0	0	True	AATAAA	-25
PB.5077.16	chr17	+	2926	11	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23070	14	intron_retention	FALSE	canonical	1	179310	junction_10	233231.5149764285	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	1833	2678	65.0	2	True	NA	NA
PB.5077.17	chr17	+	2857	11	novel_in_catalog	AC018521.1	novel	575	8	NA	NA	23068	41	intron_retention	FALSE	canonical	1	4747	junction_1	289545.6727992321	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	1737	2582	25.0	0	True	AATAAA	-22
PB.12319.2	chrX	-	2039	3	incomplete-splice_match	MAGEA6	ENST00000457643.1	921	4	2	-744	2	-53	intron_retention	FALSE	canonical	1	118	junction_2	687.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	314	945	589	1533	15.0	NA	False	ATTAAA	-18
PB.12319.3	chrX	-	1926	3	novel_not_in_catalog	MAGEA6	novel	1740	3	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	canonical	1	92	junction_2	700.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	413	1357	5.0	NA	False	AATAAA	-16
PB.12319.1	chrX	-	2180	3	novel_in_catalog	MAGEA6	novel	1740	3	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_2	746.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	667	1611	5.0	NA	False	AATAAA	-16
PB.12319.4	chrX	-	1659	3	full-splice_match	MAGEA6	ENST00000329342.9	1740	3	17	64	-14	-53	multi-exon	FALSE	canonical	1	1493	junction_1	2342.5	NA	9	NA	TRUE	NA	NA	NA	C	coding	314	945	209	1153	15.0	NA	False	ATTAAA	-18
PB.5230.8	chr17	-	2690	4	novel_in_catalog	NAT9	novel	1875	7	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	128809	junction_2	132936.34846881503	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	1499	1954	30.0	-18	True	TATAAA	-12
PB.5230.7	chr17	-	2694	5	novel_in_catalog	NAT9	novel	1875	7	NA	NA	1	-8	intron_retention	FALSE	canonical	1	34325	junction_2	180856.19185142653	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	1503	1958	30.0	-5	True	TATAAA	-12
PB.5230.6	chr17	-	2752	4	novel_in_catalog	NAT9	novel	1875	7	NA	NA	0	-8	intron_retention	FALSE	canonical	1	215156	junction_2	97336.10843190037	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	81	530	30.0	-1	True	TATAAA	-12
PB.5230.5	chr17	-	3323	3	full-splice_match	NAT9	ENST00000582168.5	863	3	-21	-2439	-5	-8	multi-exon	FALSE	canonical	1	215156	junction_1	118352.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	2132	2587	30.0	3658	False	TATAAA	-12
PB.5230.4	chr17	-	2662	5	novel_in_catalog	NAT9	novel	1875	7	NA	NA	0	-5	intron_retention	FALSE	canonical	1	215156	junction_3	93919.51093489573	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	89	538	15.0	-9	True	TATAAA	-15
PB.5230.3	chr17	-	3218	4	novel_in_catalog	NAT9	novel	1875	7	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	128809	junction_2	145540.69792329567	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	2024	2479	15.0	-26	True	TATAAA	-15
PB.5230.2	chr17	-	2181	6	novel_in_catalog	NAT9	novel	1875	7	NA	NA	3	-2	intron_retention	FALSE	canonical	1	34325	junction_2	162983.90421191903	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	102	443	10.0	-22	True	TATAAA	-18
PB.5230.1	chr17	-	2061	6	full-splice_match	NAT9	ENST00000583834.5	1993	6	-18	-50	1	16	multi-exon	FALSE	canonical	1	215156	junction_4	92071.65959056023	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	85	489	10.0	-5	True	TATAAA	-36
PB.10164.1	chr6	+	2189	3	full-splice_match	TRAF3IP2-AS1	ENST00000438298.6	1106	3	-71	-1012	-41	1012	multi-exon	FALSE	canonical	1	33053	junction_1	5693.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-429	False	NA	NA
PB.10049.16	chr6	+	2298	6	full-splice_match	AL135905.2	ENST00000370651.6	5088	6	660	2130	660	-2130	multi-exon	FALSE	canonical	1	664867	junction_2	516710.6648066788	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	494	1015	30.0	-9532	False	AATAAA	-24
PB.10485.1	chr7	+	2910	8	full-splice_match	EEPD1	ENST00000242108.8	4765	8	45	1810	45	8	multi-exon	FALSE	canonical	1	62774	junction_1	25712.382096204634	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	674	2383	35.0	-60	False	AATAAA	-22
PB.4883.1	chr17	-	2853	8	novel_not_in_catalog	CRLF3	novel	522	4	NA	NA	43	-1	any annotated donor/acceptor	FALSE	canonical	1	601	junction_7	102674.14437462445	NA	10	NA	TRUE	NA	NA	NA	C	coding	418	1257	95	1351	10.0	-42	True	AATAAA	-16
PB.4883.2	chr17	-	2796	8	novel_not_in_catalog	CRLF3	novel	522	4	NA	NA	907	-24	any annotated donor/acceptor	FALSE	canonical	1	4152	junction_7	101707.87651456519	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	337	1317	80.0	NA	False	NA	NA
PB.4883.3	chr17	-	2750	8	full-splice_match	CRLF3	ENST00000324238.6	2957	8	183	24	78	-24	multi-exon	FALSE	canonical	1	99571	junction_4	75286.05131477828	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	291	1271	80.0	190	False	NA	NA
PB.4883.4	chr17	-	2628	7	full-splice_match	CRLF3	ENST00000578692.1	1392	7	-8	-1228	-8	-24	multi-exon	FALSE	canonical	1	939	junction_6	100268.21538531319	NA	6	NA	TRUE	NA	NA	NA	C	coding	326	981	169	1149	80.0	12	True	NA	NA
PB.10485.2	chr7	+	3170	5	incomplete-splice_match	EEPD1	ENST00000242108.8	4765	8	127907	6	-27	-6	5prime_fragment	FALSE	canonical	1	93639	junction_1	16433.682718353182	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	213	839	30.0	-17	True	NA	NA
PB.4883.6	chr17	-	2584	8	full-splice_match	CRLF3	ENST00000324238.6	2957	8	86	287	-19	-287	multi-exon	FALSE	canonical	1	99571	junction_4	75286.05131477828	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	52	1368	40.0	1	True	NA	NA
PB.9787.11	chr6	+	3619	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	18	5776	18	-5776	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	459	1856	15.0	-3413	False	NA	NA
PB.8255.17	chr3	-	1845	5	novel_not_in_catalog	CLDND1	novel	560	4	NA	NA	0	-24	any annotated donor/acceptor	TRUE	canonical	1	3561	junction_1	412758.15674640215	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	73	741	75.0	-1	True	NA	NA
PB.8255.16	chr3	-	2106	5	novel_not_in_catalog	CLDND1	novel	560	4	NA	NA	-33224	-24	intron_retention	FALSE	canonical	1	7816	junction_4	508436.0663231784	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	197	958	75.0	-6	True	NA	NA
PB.8255.15	chr3	-	2037	6	full-splice_match	CLDND1	ENST00000394180.6	2228	6	160	31	-1	-24	multi-exon	FALSE	canonical	1	67708	junction_5	496876.07346605044	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	128	889	75.0	-5	True	NA	NA
PB.8255.14	chr3	-	2242	5	full-splice_match	CLDND1	ENST00000513287.5	999	5	-101	-1142	-4	-24	multi-exon	FALSE	canonical	1	11762	junction_4	506810.70852112776	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	333	1094	75.0	7160	False	NA	NA
PB.8255.13	chr3	-	2276	6	novel_in_catalog	CLDND1	novel	560	4	NA	NA	1	-24	intron_retention	FALSE	canonical	1	17927	junction_5	510529.527402833	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	367	1128	75.0	0	True	NA	NA
PB.8255.12	chr3	-	2557	6	novel_not_in_catalog	CLDND1	novel	560	4	NA	NA	-13533	-24	intron_retention	FALSE	canonical	1	3441	junction_4	554442.7709030393	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	618	1409	75.0	-3	True	NA	NA
PB.11480.5	chr9	-	3903	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	457	1350	457	-1350	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	608	1827	92	1918	15.0	472	False	NA	NA
PB.8255.10	chr3	-	5837	3	novel_in_catalog	CLDND1	novel	560	4	NA	NA	-3	-24	intron_retention	FALSE	canonical	1	586990	junction_2	390367.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	96	449	75.0	-1	True	NA	NA
PB.11951.5	chrX	-	1855	9	full-splice_match	PRKX	ENST00000262848.5	6031	9	146	4030	146	225	multi-exon	FALSE	canonical	1	60339	junction_1	34207.61297005938	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	210	1286	15.0	5	True	ATTAAA	-16
PB.11951.4	chrX	-	2241	8	novel_in_catalog	PRKX	novel	6031	9	NA	NA	-23	562	no_combination_of_known_junctions	FALSE	canonical	1	14778	junction_5	41060.439882530954	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	379	1335	65.0	-6	True	NA	NA
PB.11951.6	chrX	-	2689	9	novel_in_catalog	PRKX	novel	6031	9	NA	NA	228	1078	combination_of_known_junctions	FALSE	canonical	1	66914	junction_6	33241.61765745426	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	128	1204	30.0	-3	True	AATAAA	-19
PB.11951.1	chrX	-	2718	9	full-splice_match	PRKX	ENST00000262848.5	6031	9	-7	3320	-7	935	multi-exon	FALSE	canonical	1	60339	junction_1	34207.61297005938	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	363	1439	70.0	10	True	NA	NA
PB.11951.3	chrX	-	2118	9	full-splice_match	PRKX	ENST00000262848.5	6031	9	220	3693	220	562	multi-exon	FALSE	canonical	1	60339	junction_1	34207.61297005938	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	136	1212	65.0	237	False	NA	NA
PB.11951.2	chrX	-	2270	9	full-splice_match	PRKX	ENST00000262848.5	6031	9	231	3530	231	725	multi-exon	FALSE	canonical	1	60339	junction_1	34207.61297005938	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	125	1201	100.0	0	True	NA	NA
PB.10049.17	chr6	+	4577	6	novel_in_catalog	PTP4A1	novel	4711	8	NA	NA	-20	11	combination_of_known_junctions	FALSE	canonical	1	3725	junction_1	711199.6342253278	NA	1	NA	TRUE	NA	NA	NA	B	coding	173	522	842	1363	25.0	-8986	False	ATTAAA	-28
PB.11718.5	chr9	+	1834	5	full-splice_match	DNAJC25	ENST00000447096.1	2498	5	-24	688	-16	-682	multi-exon	FALSE	canonical	1	30563	junction_1	85372.10485976962	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	677	1393	20.0	2	True	AAAACA	-25
PB.2967.4	chr12	-	4700	15	novel_in_catalog	CAMKK2	novel	4453	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	86827	junction_2	133796.64224145067	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	176	1672	10.0	-45	True	AAAAAG	-22
PB.2967.3	chr12	-	4883	16	novel_not_in_catalog	CAMKK2	novel	4453	16	NA	NA	5	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	138634.08200246672	NA	15	1	TRUE	NA	NA	NA	C	coding	518	1557	128	1684	15.0	3	True	AATAAA	-20
PB.2967.2	chr12	-	4823	16	full-splice_match	CAMKK2	ENST00000412367.6	2006	16	-65	-2752	2	-3	multi-exon	FALSE	canonical	1	143289	junction_15	110953.47786747782	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	174	1799	20.0	-43	True	AAAAAG	-18
PB.11354.1	chr8	+	2388	3	full-splice_match	CHRAC1	ENST00000220913.9	2488	3	121	-21	108	21	multi-exon	FALSE	canonical	1	366430	junction_1	40550.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	82	477	5.0	0	True	NA	NA
PB.11718.1	chr9	+	2309	4	full-splice_match	DNAJC25	ENST00000313525.3	2268	4	-45	4	-45	2	multi-exon	FALSE	canonical	1	50159	junction_1	84883.51826800981	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	102	1184	30.0	-27	True	AATAAA	-17
PB.2967.9	chr12	-	4872	17	novel_not_in_catalog	CAMKK2	novel	4453	16	NA	NA	1	-9	any annotated donor/acceptor	FALSE	canonical	1	5799	junction_14	158352.90301391255	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	175	1854	40.0	-44	True	TATAAA	-42
PB.2967.8	chr12	-	5005	17	novel_not_in_catalog	CAMKK2	novel	4453	16	NA	NA	1	3	any annotated donor/acceptor	FALSE	canonical	1	1954	junction_15	153260.19224951853	NA	9	2	TRUE	NA	NA	NA	C	coding	541	1626	277	1902	15.0	-1	True	AATAAA	-20
PB.10505.3	chr7	-	2091	2	full-splice_match	C7orf25	ENST00000432637.1	578	2	-143	-1370	3	-1	multi-exon	FALSE	canonical	1	2218	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	467	1732	20.0	-18	True	ATTAAA	-16
PB.10505.2	chr7	-	1770	2	full-splice_match	C7orf25	ENST00000447342.5	1823	2	53	0	53	0	multi-exon	FALSE	canonical	1	76206	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	145	1410	20.0	32	True	ATTAAA	-17
PB.4258.2	chr16	-	2862	4	full-splice_match	CPPED1	ENST00000381774.8	6273	4	130	3281	-36	407	multi-exon	FALSE	canonical	1	246069	junction_1	48769.97767752889	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	112	1056	90.0	-76	True	NA	NA
PB.4258.3	chr16	-	2701	4	full-splice_match	CPPED1	ENST00000381774.8	6273	4	130	3442	-36	246	multi-exon	FALSE	canonical	1	246069	junction_1	48769.97767752889	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	112	1056	65.0	-76	True	NA	NA
PB.2007.4	chr11	-	3105	8	novel_in_catalog	STX5	novel	1785	11	NA	NA	12	-3	intron_retention	FALSE	canonical	1	421887	junction_3	93405.23659947596	NA	2	NA	TRUE	NA	NA	NA	C	coding	149	450	2087	2536	25.0	-26	True	NA	NA
PB.4258.1	chr16	-	3799	4	full-splice_match	CPPED1	ENST00000381774.8	6273	4	131	2343	-35	1345	multi-exon	FALSE	canonical	1	246069	junction_1	48769.97767752889	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	111	1055	20.0	-75	True	GATAAA	-21
PB.11790.11	chr9	+	3401	19	novel_not_in_catalog	GAPVD1	novel	3720	16	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_2	95744.1552082591	NA	6	1	TRUE	NA	NA	NA	C	coding	993	2979	421	3399	80.0	-12	True	NA	NA
PB.2007.3	chr11	-	1756	11	full-splice_match	STX5	ENST00000294179.7	1794	11	37	1	0	-1	multi-exon	FALSE	canonical	1	236419	junction_10	128977.65551846568	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	118	1185	25.0	-1	True	NA	NA
PB.4258.4	chr16	-	2440	4	full-splice_match	CPPED1	ENST00000381774.8	6273	4	136	3697	-30	-9	multi-exon	FALSE	canonical	1	246069	junction_1	48769.97767752889	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	106	1050	45.0	-70	True	ATTAAA	-7
PB.2007.1	chr11	-	2392	9	novel_in_catalog	STX5	novel	1785	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	236419	junction_8	136708.2374920674	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1371	1820	20.0	-1	True	NA	NA
PB.8357.4	chr3	+	3489	5	novel_not_in_catalog	UMPS	novel	6738	6	NA	NA	4	230	intron_retention	FALSE	canonical	1	215	junction_2	212190.58450173395	NA	2	1	TRUE	NA	NA	NA	C	coding	164	495	581	1075	10.0	-16	True	NA	NA
PB.8357.5	chr3	+	1683	6	full-splice_match	UMPS	ENST00000232607.6	6738	6	79	4976	0	227	multi-exon	FALSE	canonical	1	323039	junction_1	87025.87539668877	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	28	1470	10.0	-8	True	NA	NA
PB.7933.7	chr3	+	1906	4	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	25	1444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	211767.20851969084	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	36	677	25.0	22	True	ATTAAA	-17
PB.376.1	chr1	-	946	6	full-splice_match	PRDX1	ENST00000319248.12	1021	6	70	5	-19	-1	multi-exon	FALSE	canonical	1	2194992	junction_1	2580594.9487256305	NA	0	NA	TRUE	NA	NA	NA	A	coding	199	600	70	669	20.0	-3	True	ATTAAA	-12
PB.10950.19	chr7	-	3314	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	47	4636	0	-216	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	191	1663	25.0	-1	True	AATAAA	-21
PB.8357.2	chr3	+	1795	7	full-splice_match	UMPS	ENST00000467167.5	2242	7	-11	458	1	229	multi-exon	FALSE	canonical	1	10203	junction_1	214991.2844771594	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	414	1580	10.0	-19	True	NA	NA
PB.8357.3	chr3	+	1538	5	full-splice_match	UMPS	ENST00000462091.5	2001	5	3	460	3	227	multi-exon	FALSE	canonical	1	18720	junction_1	206929.5010775107	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	417	1325	10.0	-17	True	NA	NA
PB.10950.18	chr7	-	3559	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	29	4409	7	11	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	209	1681	25.0	2	True	AGTAAA	-27
PB.11080.2	chr8	-	3952	6	novel_not_in_catalog	FUT10	novel	3825	5	NA	NA	-11	278	intron_retention	FALSE	non_canonical	0	0	junction_4	47555.75263456568	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	356	1921	20.0	-29	True	AATAAA	-17
PB.6940.12	chr2	-	2627	17	novel_in_catalog	ORC2	novel	4312	18	NA	NA	-20	-741	intron_retention	FALSE	canonical	1	153047	junction_6	40413.93575158937	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	271	1815	40.0	0	True	ATTAAA	-14
PB.7951.10	chr3	-	2963	16	novel_not_in_catalog	XPC	novel	3832	16	NA	NA	0	-141	any annotated donor/acceptor	FALSE	canonical	1	7238	junction_1	90486.24413894818	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	34	2769	50.0	-1	True	AAAAAG	-35
PB.6940.10	chr2	-	2685	17	novel_in_catalog	ORC2	novel	4312	18	NA	NA	-15	-28	no_combination_of_known_junctions	FALSE	canonical	1	2023	junction_6	64912.26546558824	NA	3	NA	TRUE	NA	NA	NA	C	coding	307	924	266	1189	25.0	5	False	AATAAA	-18
PB.6940.11	chr2	-	2401	18	full-splice_match	ORC2	ENST00000234296.6	4312	18	1	1910	1	-429	multi-exon	FALSE	canonical	1	153047	junction_7	39296.53346298643	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	250	1983	20.0	-20	True	TATAAA	-17
PB.6940.14	chr2	-	2493	1	genic	ORC2	novel	NA	NA	NA	NA	-12	-3778	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	8	False	NA	NA
PB.7950.5	chr3	+	3200	10	incomplete-splice_match	TMEM43	ENST00000306077.4	3341	12	83	5624	8	5134	3prime_fragment	FALSE	canonical	1	399712	junction_1	228314.74098713972	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	172	1149	20.0	2	True	NA	NA
PB.7950.6	chr3	+	3191	12	full-splice_match	TMEM43	ENST00000306077.4	3341	12	171	-21	96	21	multi-exon	FALSE	canonical	1	399712	junction_1	217871.8398092886	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	84	1286	30.0	-6525	False	AATAAA	-34
PB.7950.7	chr3	+	2416	12	full-splice_match	TMEM43	ENST00000306077.4	3341	12	112	813	37	-813	multi-exon	FALSE	canonical	1	399712	junction_1	217871.8398092886	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	143	1345	40.0	0	True	ATTAAA	-15
PB.7950.1	chr3	+	2683	12	full-splice_match	TMEM43	ENST00000306077.4	3341	12	143	515	68	-515	multi-exon	FALSE	canonical	1	399712	junction_1	217871.8398092886	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	112	1314	30.0	0	True	GATAAA	-14
PB.7950.2	chr3	+	3837	11	novel_in_catalog	TMEM43	novel	3341	12	NA	NA	2	-1	intron_retention	FALSE	canonical	1	399712	junction_1	228145.97428357136	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	178	987	10.0	-4	True	AATAAA	-12
PB.7950.3	chr3	+	4280	1	novel_in_catalog	TMEM43	novel	3341	12	NA	NA	7	-3620	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	1	True	NA	NA
PB.7950.8	chr3	+	2025	12	novel_not_in_catalog	TMEM43	novel	3341	12	NA	NA	120	-1124	any annotated donor/acceptor	FALSE	canonical	1	393	junction_5	273336.9343971884	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	60	1265	85.0	2	True	NA	NA
PB.11645.5	chr9	-	2900	16	novel_in_catalog	SPTLC1	novel	2042	16	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	7256	junction_15	261055.23062255536	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	627	1583	30.0	19	True	AATAAA	-13
PB.7043.22	chr2	-	2360	11	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	20	junction_9	856989.6592202557	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	390	1655	45.0	-3	True	AATAAA	-15
PB.8347.3	chr3	+	4818	11	novel_in_catalog	PARP15	novel	2156	12	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	1	5355	junction_4	35519.78017513622	NA	0	NA	TRUE	NA	NA	NA	B	coding	609	1830	47	1876	20.0	-2	True	NA	NA
PB.8347.2	chr3	+	2292	11	novel_in_catalog	PARP15	novel	2156	12	NA	NA	-11	0	intron_retention	FALSE	canonical	1	3272	junction_3	33642.74474771641	NA	0	NA	TRUE	NA	NA	NA	B	coding	424	1272	1019	2290	20.0	-718	False	AATACA	-15
PB.8347.1	chr3	+	4609	10	novel_in_catalog	PARP15	novel	2156	12	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	8722	junction_3	32338.756547859542	NA	0	NA	TRUE	NA	NA	NA	B	coding	533	1602	63	1664	25.0	4	True	NA	NA
PB.6971.7	chr2	+	3663	12	full-splice_match	FASTKD2	ENST00000236980.10	3188	12	237	-712	-12	712	multi-exon	FALSE	canonical	1	150003	junction_1	81294.3845823812	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	112	2244	100.0	-12	True	NA	NA
PB.8347.7	chr3	+	4828	12	novel_in_catalog	PARP15	novel	2156	12	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	5015	junction_5	37481.257934868794	NA	1	NA	TRUE	NA	NA	NA	B	coding	356	1071	813	1883	25.0	0	True	NA	NA
PB.8347.6	chr3	+	5503	12	novel_in_catalog	PARP15	novel	2156	12	NA	NA	14	0	intron_retention	FALSE	canonical	1	9656	junction_4	34407.43081236142	NA	6	NA	TRUE	NA	NA	NA	B	coding	444	1335	1222	2556	15.0	-8	True	NA	NA
PB.8347.5	chr3	+	3807	10	novel_in_catalog	PARP15	novel	2156	12	NA	NA	12	-770	no_combination_of_known_junctions	FALSE	canonical	1	8722	junction_3	32338.756547859542	NA	0	NA	TRUE	NA	NA	NA	B	coding	533	1602	29	1630	40.0	-10	True	NA	NA
PB.8347.4	chr3	+	4824	12	novel_in_catalog	PARP15	novel	2156	12	NA	NA	5	-2	no_combination_of_known_junctions	FALSE	canonical	1	3272	junction_3	36659.35266253843	NA	0	NA	TRUE	NA	NA	NA	B	coding	425	1278	602	1879	25.0	-17	True	NA	NA
PB.4902.1	chr17	+	1518	1	full-splice_match	ZNF830	ENST00000361952.4	2246	1	1	727	1	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	372	1119	37	1155	20.0	-2530	False	AATAGA	-25
PB.4902.2	chr17	+	1646	1	full-splice_match	ZNF830	ENST00000361952.4	2246	1	10	590	10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	372	1119	28	1146	15.0	0	True	CATAAA	-22
PB.8347.8	chr3	+	4661	11	novel_in_catalog	PARP15	novel	2156	12	NA	NA	133	-2	no_combination_of_known_junctions	FALSE	canonical	1	8722	junction_3	32639.199609671803	NA	0	NA	TRUE	NA	NA	NA	B	coding	541	1626	91	1716	25.0	-574	False	NA	NA
PB.9533.2	chr5	+	2307	9	full-splice_match	RNF14	ENST00000394520.6	4235	9	52	1876	-4	-770	multi-exon	FALSE	canonical	1	76622	junction_1	117967.19838767682	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	258	1682	30.0	-14	True	TATAAA	-19
PB.8523.6	chr3	-	3410	5	full-splice_match	NCEH1	ENST00000475381.5	4687	5	128	1149	22	-753	multi-exon	FALSE	canonical	1	158311	junction_4	30089.86244048816	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	107	1333	60.0	-26	True	NA	NA
PB.4770.9	chr17	-	3461	20	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	-78	0	any annotated donor/acceptor	FALSE	canonical	1	6396	junction_8	56721.691528905205	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	827	2113	15.0	3056	False	AATAAA	-17
PB.3762.4	chr15	+	2067	11	full-splice_match	C15orf41	ENST00000643785.1	2857	11	37	753	-5	-3	multi-exon	FALSE	canonical	1	70320	junction_5	17343.649070769392	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	180	1025	20.0	-1	True	AATAAA	-25
PB.3762.1	chr15	+	2866	10	full-splice_match	C15orf41	ENST00000642817.1	2506	10	-91	-269	-50	-4	multi-exon	FALSE	canonical	1	7764	junction_1	30630.18917487923	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	549	1100	75.0	-226	False	ATTAAA	-23
PB.5840.1	chr19	+	2541	2	novel_not_in_catalog	GDF15	novel	562	2	NA	NA	-45	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	94	285	78	362	20.0	-2998	False	AATAAA	-17
PB.3762.3	chr15	+	2828	11	full-splice_match	C15orf41	ENST00000643785.1	2857	11	0	29	0	-4	multi-exon	FALSE	canonical	1	70320	junction_5	17343.649070769392	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	217	1062	75.0	0	True	ATTAAA	-23
PB.3762.2	chr15	+	2444	12	full-splice_match	C15orf41	ENST00000437989.6	2240	12	-220	16	-10	-3	multi-exon	FALSE	canonical	1	26619	junction_11	25908.922356708517	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	238	1083	70.0	-21	True	ATTAAA	-32
PB.4770.1	chr17	-	3053	20	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	-12	1	any annotated donor/acceptor	TRUE	canonical	1	22784	junction_10	51211.12992087611	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	253	2502	30.0	-16	True	AATAAA	-32
PB.4770.3	chr17	-	3348	20	novel_in_catalog	PIK3R6	novel	3291	20	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	38387	junction_16	49377.02533116001	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	774	2798	35.0	-29	True	AATAAA	-31
PB.4770.2	chr17	-	3772	19	novel_in_catalog	PIK3R6	novel	3291	20	NA	NA	-25	0	intron_retention	FALSE	canonical	1	65500	junction_12	44945.928927585635	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	1198	3222	35.0	-29	True	AATAAA	-31
PB.4770.5	chr17	-	3108	21	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	3236	junction_17	56102.86549847521	NA	2	NA	TRUE	NA	NA	NA	C	coding	674	2025	534	2558	35.0	-1	True	AATAAA	-31
PB.4770.4	chr17	-	3061	20	full-splice_match	PIK3R6	ENST00000619866.4	3041	20	-6	-14	-6	0	multi-exon	FALSE	canonical	1	65500	junction_12	45074.555716457275	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	247	2511	35.0	-10	True	AATAAA	-31
PB.4770.7	chr17	-	2944	19	novel_in_catalog	PIK3R6	novel	3291	20	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	7439	junction_7	54120.949287364056	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	253	2394	35.0	-16	True	AATAAA	-31
PB.4770.6	chr17	-	2964	20	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	-52	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	53395.25315394582	NA	1	1	TRUE	NA	NA	NA	C	coding	394	1185	1230	2414	35.0	3082	False	AATAAA	-31
PB.1187.4	chr1	-	4027	24	novel_not_in_catalog	NUP133	novel	5207	26	NA	NA	0	481	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	104120.16352532608	NA	41	4	TRUE	NA	NA	NA	C	coding	1054	3165	93	3257	35.0	-15	True	AATAAA	-18
PB.8083.18	chr3	-	4916	19	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-49	302	combination_of_known_junctions	FALSE	canonical	1	127722	junction_6	380738.36864472553	NA	7	NA	TRUE	NA	NA	NA	C	coding	1136	3411	138	3548	45.0	-43	True	AATAAA	-7
PB.8083.19	chr3	-	4834	18	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-45	302	no_combination_of_known_junctions	FALSE	canonical	1	100083	junction_13	400948.9061861566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1110	3333	134	3466	45.0	-39	True	AATAAA	-7
PB.2478.4	chr12	+	4733	2	full-splice_match	APOLD1	ENST00000326765.10	4724	2	-12	3	2	-3	multi-exon	FALSE	canonical	1	4204	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	246	741	182	922	20.0	-1	True	AATAAA	-14
PB.2478.5	chr12	+	4592	2	full-splice_match	APOLD1	ENST00000356591.4	4646	2	52	2	52	-2	multi-exon	FALSE	canonical	1	10715	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	246	741	40	780	20.0	0	True	AATAAA	-15
PB.2478.6	chr12	+	4266	2	full-splice_match	APOLD1	ENST00000356591.4	4646	2	52	328	52	-328	multi-exon	FALSE	canonical	1	10715	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	40	780	35.0	0	True	ATTAAA	-16
PB.10291.6	chr6	-	3791	9	novel_not_in_catalog	IPCEF1	novel	498	2	NA	NA	15	-33	any annotated donor/acceptor	FALSE	canonical	1	4878	junction_6	25623.021933104905	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	1138	2070	80.0	-14	True	NA	NA
PB.8083.12	chr3	-	5028	19	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-53	309	combination_of_known_junctions	FALSE	canonical	1	127722	junction_6	345668.0118337384	NA	1	1	TRUE	NA	NA	NA	C	coding	1137	3414	142	3555	25.0	377	False	AATAAA	-14
PB.2478.1	chr12	+	1430	1	novel_in_catalog	APOLD1	novel	574	4	NA	NA	0	-64120	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	77	234	85	318	30.0	-3	True	NA	NA
PB.2478.2	chr12	+	2749	1	novel_in_catalog	APOLD1	novel	574	4	NA	NA	0	-62801	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	99	300	2273	2572	100.0	-3	True	NA	NA
PB.2478.3	chr12	+	4369	2	full-splice_match	APOLD1	ENST00000326765.10	4724	2	-13	368	1	-368	multi-exon	FALSE	canonical	1	4204	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	84	923	35.0	-2	True	AATAAA	-29
PB.8448.14	chr3	+	3501	28	novel_in_catalog	U2SURP	novel	725	6	NA	NA	-8	-9	combination_of_known_junctions	FALSE	canonical	1	338381	junction_23	179259.38693287462	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	28	3114	30.0	0	True	AATAAA	-12
PB.10474.10	chr7	+	6781	14	novel_in_catalog	AVL9	novel	489	3	NA	NA	15	-4	intron_retention	FALSE	canonical	1	6613	junction_12	65221.75052068327	NA	5	NA	TRUE	NA	NA	NA	C	coding	637	1914	207	2120	20.0	-5	True	AATAAA	-17
PB.9655.2	chr5	+	5485	5	novel_not_in_catalog	N4BP3	novel	6080	5	NA	NA	90	-502	any annotated donor/acceptor	FALSE	canonical	1	5855	junction_1	45362.00599827459	NA	2	NA	TRUE	NA	NA	NA	C	coding	544	1635	267	1901	60.0	1	True	GGGGCT	-23
PB.7887.3	chr22	+	3938	23	novel_in_catalog	PPP6R2	novel	4035	23	NA	NA	1	0	intron_retention	FALSE	canonical	1	186250	junction_1	126048.44580318616	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	381	2261	15.0	-9	True	AATAAA	-32
PB.2116.1	chr11	-	2541	10	novel_in_catalog	UNC93B1	novel	513	5	NA	NA	-12	0	intron_retention	FALSE	canonical	1	67579	junction_4	178130.5762268611	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	861	2099	15.0	-80	False	AATAAA	-17
PB.12331.1	chrX	+	1979	2	full-splice_match	ABCD1	ENST00000370129.4	1016	2	-964	1	-15	-1	multi-exon	FALSE	canonical	1	115317	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	415	1653	5.0	-3	True	ATTAAA	-16
PB.2186.4	chr11	-	3293	24	novel_in_catalog	INTS4	novel	3459	24	NA	NA	2	-42	no_combination_of_known_junctions	FALSE	canonical	1	1162	junction_12	100809.00345686376	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	34	1998	10.0	-9	True	AATAAA	-14
PB.2116.2	chr11	-	2307	11	full-splice_match	UNC93B1	ENST00000227471.6	2316	11	9	0	-7	0	multi-exon	FALSE	canonical	1	67579	junction_4	170646.21731418485	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	72	1865	15.0	-59	True	AATAAA	-17
PB.2186.2	chr11	-	2975	21	novel_not_in_catalog	INTS4	novel	3459	24	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	104960.84540527481	NA	31	5	TRUE	NA	NA	NA	C	coding	564	1695	1054	2748	15.0	0	True	AATAAA	-15
PB.903.3	chr1	+	2686	17	full-splice_match	POU2F1	ENST00000271411.8	13945	17	-6	11265	-2	172	multi-exon	FALSE	canonical	1	8514	junction_1	35231.36999175726	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2232	185	2416	90.0	-7	True	AAAACA	-45
PB.2186.1	chr11	-	3085	23	full-splice_match	INTS4	ENST00000534064.5	3156	23	4	67	-3	-65	multi-exon	FALSE	canonical	1	1162	junction_11	95753.82491987004	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	32	2923	70.0	-7	True	GATAAA	-14
PB.7887.5	chr22	+	3515	25	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	2	-5	any annotated donor/acceptor	FALSE	canonical	1	4534	junction_3	180016.10855449623	NA	5	NA	TRUE	NA	NA	NA	C	coding	954	2865	513	3377	30.0	-8	True	AATAAA	-27
PB.8178.2	chr3	-	5093	13	full-splice_match	RFT1	ENST00000296292.7	5108	13	10	5	1	-5	multi-exon	FALSE	canonical	1	179492	junction_12	33479.27616410221	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	53	1678	25.0	-18	True	AATAAA	-20
PB.8779.29	chr4	+	1999	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	234714.10969197418	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	199	1833	30.0	-2	True	AATAAA	-24
PB.11283.2	chr8	-	2850	4	full-splice_match	KLF10	ENST00000285407.10	3097	4	177	70	177	-63	multi-exon	FALSE	canonical	1	384119	junction_3	174255.745539582	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	125	1567	30.0	-3	True	ATTAAA	-20
PB.7887.4	chr22	+	4098	24	full-splice_match	PPP6R2	ENST00000612753.4	4104	24	2	4	2	-4	multi-exon	FALSE	canonical	1	186250	junction_1	123820.22563266476	NA	3	NA	TRUE	NA	NA	NA	C	coding	959	2880	380	3259	30.0	-8	True	AATAAA	-17
PB.7115.9	chr2	+	1974	7	full-splice_match	ATG4B	ENST00000425239.5	807	7	-13	-1154	1	830	multi-exon	FALSE	canonical	1	429103	junction_3	139714.78248848816	NA	2	NA	TRUE	NA	NA	NA	C	coding	291	876	22	897	65.0	1	True	NA	NA
PB.7115.8	chr2	+	2362	12	incomplete-splice_match	ATG4B	ENST00000402096.5	1685	13	78	-6	-3	3	intron_retention	FALSE	canonical	1	429103	junction_3	114801.64966268005	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	26	1273	25.0	-3	True	ATTAAA	-25
PB.7933.3	chr3	+	1986	3	novel_not_in_catalog	VHL	novel	3737	3	NA	NA	-9	1444	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	17697.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	70	588	25.0	-12	True	ATTAAA	-17
PB.6646.6	chr2	+	4794	16	incomplete-splice_match	INPP4A	ENST00000409851.7	3365	25	94669	-2491	-14898	-881	5prime_fragment	FALSE	canonical	1	110102	junction_7	31438.032189195445	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	25	2250	20.0	-2660	False	AATAAA	-16
PB.7887.7	chr22	+	4014	23	full-splice_match	PPP6R2	ENST00000395744.7	3293	23	-11	-710	3	-6	multi-exon	FALSE	canonical	1	173192	junction_14	135045.5085515941	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	379	3177	35.0	-7	True	AATAAA	-15
PB.7115.1	chr2	+	2915	14	novel_in_catalog	ATG4B	novel	3294	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	60508	junction_3	220653.3451482225	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	371	1330	40.0	-63	False	NA	NA
PB.7115.3	chr2	+	2431	13	full-splice_match	ATG4B	ENST00000482507.5	2414	13	-20	3	-15	0	multi-exon	FALSE	canonical	1	60508	junction_3	228967.15686660475	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	323	1348	40.0	-15	False	ATTAAA	-19
PB.7887.6	chr22	+	3321	23	full-splice_match	PPP6R2	ENST00000395744.7	3293	23	-12	-16	2	0	multi-exon	FALSE	canonical	1	173192	junction_14	135045.5085515941	NA	1	NA	TRUE	NA	NA	NA	C	coding	932	2799	380	3178	15.0	-8	True	AATAAA	-32
PB.7115.5	chr2	+	1574	13	full-splice_match	ATG4B	ENST00000404914.7	2878	13	77	1227	-4	-1	multi-exon	FALSE	canonical	1	429103	junction_3	116468.0426033432	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	27	1208	35.0	-4	True	ATTAAA	-21
PB.7115.4	chr2	+	4925	10	novel_not_in_catalog	ATG4B	novel	3294	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	6244	junction_7	227130.13852072658	NA	1	1	TRUE	NA	NA	NA	C	coding	241	726	28	753	35.0	-5	True	ATTAAA	-21
PB.7115.7	chr2	+	2792	13	full-splice_match	ATG4B	ENST00000404914.7	2878	13	78	8	-3	0	multi-exon	FALSE	canonical	1	429103	junction_3	116468.0426033432	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	26	1207	40.0	-3	True	NA	NA
PB.7115.6	chr2	+	3578	12	incomplete-splice_match	ATG4B	ENST00000404914.7	2878	13	77	8	-4	0	intron_retention	FALSE	canonical	1	429103	junction_3	114801.64966268005	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	27	1274	40.0	-4	True	NA	NA
PB.9149.1	chr5	-	4473	15	novel_not_in_catalog	DNAH5	novel	15633	79	NA	NA	31743	-1	any annotated donor/acceptor	TRUE	canonical	1	784	junction_14	3212.1739356481216	NA	6	NA	TRUE	NA	NA	NA	A	coding	905	2718	104	2821	35.0	NA	False	AATAAA	-11
PB.8273.1	chr3	-	4978	11	full-splice_match	ZBTB11	ENST00000312938.4	6020	11	481	561	104	-561	multi-exon	FALSE	canonical	1	105282	junction_8	48500.86080514448	NA	0	NA	TRUE	NA	NA	NA	C	coding	1053	3162	101	3262	40.0	9703	False	AATAAA	-19
PB.903.4	chr1	+	2482	17	novel_in_catalog	POU2F1	novel	13905	16	NA	NA	0	33	no_combination_of_known_junctions	FALSE	canonical	1	785	junction_1	37722.52547881703	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2232	120	2351	85.0	0	True	NA	NA
PB.5504.9	chr18	-	4613	30	full-splice_match	PIGN	ENST00000638936.1	4233	30	26	-406	0	5	multi-exon	FALSE	canonical	0	0	junction_18	50846.544384434696	NA	4	NA	TRUE	NA	NA	NA	C	coding	931	2796	190	2985	20.0	-61	True	AATAAA	-19
PB.5504.8	chr18	-	4873	31	full-splice_match	PIGN	ENST00000639902.1	4439	31	-28	-406	0	5	multi-exon	FALSE	canonical	0	0	junction_19	56637.030718711074	NA	3	NA	TRUE	NA	NA	NA	C	coding	970	2913	333	3245	20.0	-25	True	AATAAA	-19
PB.7887.8	chr22	+	3629	26	novel_not_in_catalog	PPP6R2	novel	4035	23	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	15	junction_2	185604.11876479897	NA	4	1	TRUE	NA	NA	NA	C	coding	959	2880	626	3505	40.0	-7	True	AATAAA	-13
PB.5543.2	chr19	-	2679	13	novel_in_catalog	MIER2	novel	6884	14	NA	NA	8	-2	intron_retention	FALSE	canonical	1	3687	junction_12	69332.0042638539	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	35	1564	5.0	-6	True	ATTAAA	-16
PB.5543.3	chr19	-	2289	15	novel_not_in_catalog	MIER2	novel	6884	14	NA	NA	-12	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	84236.7779418557	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	13	1650	5.0	-1	True	ATTAAA	-16
PB.5504.7	chr18	-	4882	31	full-splice_match	PIGN	ENST00000640252.1	7924	31	-22	3064	1	5	multi-exon	FALSE	canonical	0	0	junction_18	47373.01069841585	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	459	3254	20.0	-74	True	AATAAA	-19
PB.5543.1	chr19	-	2788	14	full-splice_match	MIER2	ENST00000264819.6	6884	14	-33	4129	0	0	multi-exon	FALSE	canonical	1	18465	junction_13	70531.75862540859	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	34	1671	5.0	-22	True	ATTAAA	-18
PB.5504.1	chr18	-	4238	26	full-splice_match	PIGN	ENST00000638167.1	4195	26	-22	-21	0	12	multi-exon	FALSE	canonical	0	0	junction_15	51936.03032371265	NA	4	NA	TRUE	NA	NA	NA	C	coding	797	2394	210	2603	10.0	-28	True	AATAAA	-26
PB.5543.4	chr19	-	2755	14	novel_in_catalog	MIER2	novel	6884	14	NA	NA	1	-3	intron_retention	FALSE	canonical	1	16593	junction_3	83466.65402550301	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	25	1641	5.0	-13	True	ATTAAA	-15
PB.5504.2	chr18	-	4764	30	full-splice_match	PIGN	ENST00000400334.7	4456	30	14	-322	0	6	multi-exon	FALSE	canonical	0	0	junction_18	46705.61188118827	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	340	3135	20.0	-32	True	AATAAA	-20
PB.8152.3	chr3	-	2206	14	full-splice_match	PCBP4	ENST00000461554.5	2147	14	-60	1	-48	0	multi-exon	FALSE	canonical	1	19421	junction_13	202779.73832296795	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	393	1604	35.0	8338	False	AATAAA	-15
PB.8152.2	chr3	-	1859	13	novel_in_catalog	PCBP4	novel	2015	13	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	1	85642	junction_1	192998.4840555749	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	241	1212	30.0	8342	False	AATAAA	-17
PB.8152.1	chr3	-	2009	13	full-splice_match	PCBP4	ENST00000355852.6	2015	13	3	3	0	-1	multi-exon	TRUE	canonical	1	122131	junction_12	144649.5817487088	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	194	1405	30.0	-10	True	AATAAA	-17
PB.9943.1	chr6	+	6353	24	full-splice_match	ANKS1A	ENST00000360359.4	6347	24	-15	9	-15	-9	multi-exon	TRUE	canonical	1	53828	junction_1	50790.84525402336	NA	3	NA	TRUE	NA	NA	NA	A	coding	1134	3405	154	3558	20.0	-5	True	AATAAA	-19
PB.5687.9	chr19	-	3322	8	novel_not_in_catalog	ZNF561	novel	912	7	NA	NA	4	-1132	any annotated donor/acceptor	FALSE	canonical	1	3526	junction_7	45459.1872805056	NA	1	1	TRUE	NA	NA	NA	C	coding	265	798	789	1586	50.0	3	True	NA	NA
PB.5687.8	chr19	-	3396	6	full-splice_match	ZNF561	ENST00000302851.7	4693	6	165	1132	0	-1132	multi-exon	FALSE	canonical	1	51325	junction_1	29236.949173263616	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	200	1660	50.0	-30	True	NA	NA
PB.2275.6	chr11	-	4260	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	42	1285	1	-1285	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	25	1830	35.0	3	True	NA	NA
PB.5687.5	chr19	-	4295	5	full-splice_match	ZNF561	ENST00000465974.5	625	5	18	-3688	5	-86	multi-exon	FALSE	canonical	1	4442	junction_2	32050.86080747286	NA	3	NA	TRUE	NA	NA	NA	C	coding	379	1140	374	1513	20.0	-10	True	ATTAAA	-19
PB.5687.4	chr19	-	4410	5	full-splice_match	ZNF561	ENST00000424629.5	4419	5	3	6	0	0	multi-exon	FALSE	canonical	1	2716	junction_3	33577.68793782562	NA	4	NA	TRUE	NA	NA	NA	C	coding	417	1254	289	1542	30.0	-1	True	NA	NA
PB.5687.7	chr19	-	3420	6	full-splice_match	ZNF561	ENST00000443819.5	956	6	28	-2492	2	-1132	multi-exon	FALSE	canonical	1	15861	junction_3	26848.411883014607	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	431	1684	50.0	1	True	NA	NA
PB.5687.1	chr19	-	4668	7	novel_in_catalog	ZNF561	novel	912	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	12079	junction_6	41433.27855084874	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	340	1800	30.0	546	False	NA	NA
PB.5451.11	chr18	-	1645	5	incomplete-splice_match	SLC39A6	ENST00000590986.5	3003	10	-14	12922	-10	-11014	3prime_fragment	FALSE	canonical	1	102786	junction_4	285375.9029958337	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1341	305	1645	65.0	-59	True	NA	NA
PB.5687.3	chr19	-	4528	6	full-splice_match	ZNF561	ENST00000302851.7	4693	6	165	0	0	0	multi-exon	FALSE	canonical	1	51325	junction_1	29236.949173263616	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	200	1660	30.0	-30	True	NA	NA
PB.5687.2	chr19	-	4577	6	full-splice_match	ZNF561	ENST00000443819.5	956	6	3	-3624	2	0	multi-exon	FALSE	canonical	1	15861	junction_3	26848.411883014607	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	456	1709	30.0	-24	True	NA	NA
PB.4051.9	chr15	+	3922	20	novel_in_catalog	PDE8A	novel	3984	23	NA	NA	-122	0	combination_of_known_junctions	FALSE	canonical	1	12041	junction_3	73207.10393934182	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	770	2689	40.0	-4	True	ATTAAA	-13
PB.4051.8	chr15	+	3492	22	full-splice_match	PDE8A	ENST00000394553.5	3912	22	-269	689	-269	-160	multi-exon	FALSE	canonical	1	81815	junction_1	56423.61408294763	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	459	2948	40.0	-326	False	ATTAAA	-16
PB.5796.1	chr19	+	2370	7	novel_not_in_catalog	TPM4	novel	1417	9	NA	NA	4	-2	intron_retention	FALSE	canonical	1	38	junction_2	777991.2860961591	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	124	423	35.0	-5536	False	AATAAA	-17
PB.5796.6	chr19	+	1809	8	full-splice_match	TPM4	ENST00000643579.1	2407	8	-7	605	-3	0	multi-exon	FALSE	canonical	1	1814	junction_7	668384.2046523963	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	71	817	80.0	-7	True	NA	NA
PB.5796.7	chr19	+	1655	8	full-splice_match	TPM4	ENST00000643579.1	2407	8	-7	759	-3	35	multi-exon	FALSE	canonical	1	1814	junction_7	668384.2046523963	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	71	817	60.0	-7	True	NA	NA
PB.5796.4	chr19	+	2381	8	novel_not_in_catalog	TPM4	novel	1417	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_1	778380.2049961948	NA	8	1	TRUE	NA	NA	NA	C	coding	217	654	71	724	35.0	-7	True	AATAAA	-17
PB.5796.5	chr19	+	2339	6	novel_in_catalog	TPM4	novel	1417	9	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	4009	junction_5	732362.5327943531	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	71	664	30.0	-7	True	AATAAA	-15
PB.4051.1	chr15	+	3616	22	novel_not_in_catalog	PDE8A	novel	3984	23	NA	NA	-3255	0	any annotated donor/acceptor	FALSE	canonical	1	78	junction_1	66650.28856600677	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	110	2383	40.0	-4846	False	ATTAAA	-13
PB.4051.3	chr15	+	3046	22	full-splice_match	PDE8A	ENST00000557957.5	3716	22	-26	696	-26	-161	multi-exon	FALSE	canonical	1	1290	junction_1	66476.85090571105	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	230	2503	40.0	-9	True	ATTAAA	-45
PB.4051.2	chr15	+	3737	22	novel_not_in_catalog	PDE8A	novel	3984	23	NA	NA	-26	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66661.46916807533	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	141	2504	40.0	-9	True	ATTAAA	-13
PB.4051.5	chr15	+	4145	23	novel_not_in_catalog	PDE8A	novel	3984	23	NA	NA	-528	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	69676.50354179606	NA	1	1	TRUE	NA	NA	NA	C	coding	829	2490	423	2912	40.0	15	True	ATTAAA	-13
PB.8330.4	chr3	-	2399	8	full-splice_match	RABL3	ENST00000273375.7	3883	8	0	1484	0	432	multi-exon	FALSE	canonical	1	183085	junction_2	20566.026893984206	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	31	741	10.0	-1	True	AATAAA	-18
PB.4051.7	chr15	+	4030	22	full-splice_match	PDE8A	ENST00000394553.5	3912	22	-118	0	-118	0	multi-exon	FALSE	canonical	1	81815	junction_1	56423.61408294763	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	308	2797	40.0	0	True	ATTAAA	-13
PB.4051.6	chr15	+	3927	23	novel_not_in_catalog	PDE8A	novel	3984	23	NA	NA	-305	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	69676.50354179606	NA	1	1	TRUE	NA	NA	NA	C	coding	829	2490	205	2694	40.0	-362	False	ATTAAA	-13
PB.9924.3	chr6	-	3277	7	novel_in_catalog	TAPBP	novel	3759	8	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	1	10824	junction_6	385636.98290292674	NA	2	NA	TRUE	NA	NA	NA	C	coding	391	1176	38	1213	25.0	-10	True	AATAAA	-21
PB.9924.2	chr6	-	3510	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-31	-2	any annotated donor/acceptor	FALSE	canonical	1	167	junction_6	406411.8408517207	NA	8	2	TRUE	NA	NA	NA	C	coding	468	1407	40	1446	25.0	-12	True	AATAAA	-21
PB.9924.1	chr6	-	3592	8	full-splice_match	TAPBP	ENST00000434618.6	3759	8	163	4	-9	-4	multi-exon	FALSE	canonical	1	785673	junction_2	142378.02317314944	NA	31	4	TRUE	NA	NA	NA	C	coding	448	1347	184	1530	25.0	11	True	AATAAA	-19
PB.1108.15	chr1	-	2402	15	incomplete-splice_match	INTS7	ENST00000366993.7	3422	20	-8	26349	-2	-1573	3prime_fragment	FALSE	canonical	1	166877	junction_6	35341.94478272963	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	108	2318	50.0	0	True	AATATA	-42
PB.4691.2	chr17	-	1427	8	full-splice_match	SLC25A11	ENST00000225665.11	1897	8	290	180	-48	7	multi-exon	FALSE	canonical	1	620876	junction_4	222824.09964730623	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	52	996	25.0	9900	False	AATAAA	-20
PB.4691.1	chr17	-	1586	8	full-splice_match	SLC25A11	ENST00000225665.11	1897	8	308	3	-30	-3	multi-exon	FALSE	canonical	1	620876	junction_4	222824.09964730623	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	34	978	20.0	-10	True	TATAAA	-40
PB.9924.4	chr6	-	3146	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-29	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	337687.29984030715	NA	1	1	TRUE	NA	NA	NA	C	coding	448	1347	38	1384	25.0	-10	True	AATAAA	-21
PB.11423.2	chr9	+	5573	10	novel_not_in_catalog	KANK1	novel	5581	16	NA	NA	-13205	0	intron_retention	FALSE	canonical	1	4828	junction_1	95645.09037408385	NA	1	1	TRUE	NA	NA	NA	B	coding	1206	3621	537	4157	5.0	2	True	AATAAA	-17
PB.11423.1	chr9	+	5051	11	novel_not_in_catalog	KANK1	novel	5581	16	NA	NA	-13262	0	any annotated donor/acceptor	FALSE	canonical	1	15935	junction_1	93254.64686309204	NA	1	NA	TRUE	NA	NA	NA	B	coding	1194	3585	598	4182	5.0	-2695	False	AATAAA	-17
PB.9924.8	chr6	-	2442	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	337687.29984030715	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	38	1384	25.0	-10	True	AATAAA	-21
PB.11423.6	chr9	+	4808	10	novel_not_in_catalog	KANK1	novel	5581	16	NA	NA	205	0	any annotated donor/acceptor	FALSE	canonical	1	14463	junction_1	111458.53916851884	NA	0	NA	TRUE	NA	NA	NA	B	coding	1114	3345	596	3940	5.0	41	True	AATAAA	-16
PB.11423.5	chr9	+	5184	11	novel_not_in_catalog	KANK1	novel	5581	16	NA	NA	69	0	any annotated donor/acceptor	FALSE	canonical	1	14463	junction_1	93557.58668777214	NA	2	NA	TRUE	NA	NA	NA	B	coding	1194	3585	732	4316	5.0	-3973	False	AATAAA	-16
PB.8656.1	chr4	+	4151	14	novel_not_in_catalog	UVSSA	novel	2927	14	NA	NA	-72	-105	any annotated donor/acceptor	FALSE	canonical	1	13128	junction_1	17769.616205609913	NA	3	NA	TRUE	NA	NA	NA	C	coding	709	2130	39	2168	80.0	-38	False	NA	NA
PB.858.9	chr1	-	1474	7	full-splice_match	SLAMF1	ENST00000302035.10	4006	7	240	2292	-34	-213	multi-exon	FALSE	canonical	1	217154	junction_3	24461.978631814178	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	111	1118	30.0	-12	True	AATAAA	-20
PB.858.8	chr1	-	1640	6	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-23	54	no_combination_of_known_junctions	FALSE	canonical	1	7678	junction_3	98949.74066787644	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	100	1017	60.0	-1	True	AAAAAG	-3
PB.10186.5	chr6	+	2077	2	full-splice_match	PLN	ENST00000357525.5	2001	2	-2	-74	-2	74	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-2	True	AGTAAA	-13
PB.5457.10	chr18	+	3146	26	novel_not_in_catalog	PIK3C3	novel	9443	25	NA	NA	5	7	any annotated donor/acceptor	FALSE	canonical	1	9775	junction_4	75104.21939320321	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	775	2880	25.0	-7	True	AATAAA	-20
PB.2605.3	chr12	-	3821	11	novel_in_catalog	LIMA1	novel	2652	5	NA	NA	-27	4	combination_of_known_junctions	FALSE	canonical	1	4544	junction_10	207297.16417790187	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	262	2541	20.0	-1	True	AATAAA	-25
PB.858.1	chr1	-	3587	5	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-21	-2	no_combination_of_known_junctions	FALSE	canonical	1	21971	junction_2	103156.13439102883	NA	2	NA	TRUE	NA	NA	NA	C	coding	239	720	98	817	10.0	1	True	AATAAA	-28
PB.10186.2	chr6	+	2647	2	full-splice_match	PLN	ENST00000357525.5	2001	2	-4	-642	-4	642	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-4	True	AGTAAA	-13
PB.858.3	chr1	-	3746	6	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-97	-9	no_combination_of_known_junctions	FALSE	canonical	1	12134	junction_2	98680.84901215635	NA	2	NA	TRUE	NA	NA	NA	C	coding	269	810	174	983	25.0	-75	False	AATAAA	-21
PB.858.2	chr1	-	3662	7	full-splice_match	SLAMF1	ENST00000302035.10	4006	7	331	13	-6	-13	multi-exon	FALSE	canonical	1	217154	junction_3	24461.978631814178	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	20	1027	35.0	79	False	AATAAA	-17
PB.6419.2	chr2	-	3855	19	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	-118	-2436	combination_of_known_junctions	FALSE	canonical	1	16294	junction_18	76910.44026427792	NA	0	NA	TRUE	NA	NA	NA	B	coding	890	2673	947	3619	20.0	0	True	TATAAA	-18
PB.858.4	chr1	-	3253	6	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	63	-9	any annotated donor/acceptor	FALSE	canonical	1	2591	junction_5	101457.23508434476	NA	1	NA	TRUE	NA	NA	NA	C	coding	86	261	354	614	25.0	148	False	AATAAA	-21
PB.858.7	chr1	-	1564	5	novel_in_catalog	SLAMF1	novel	4006	7	NA	NA	-21	54	no_combination_of_known_junctions	FALSE	canonical	1	21971	junction_2	103156.13439102883	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	98	817	60.0	1	True	AAAAAG	-3
PB.9008.20	chr4	+	3212	15	incomplete-splice_match	ABCE1	ENST00000296577.8	3921	18	10082	6	-13	-6	5prime_fragment	FALSE	canonical	1	18466	junction_13	169028.653999847	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	527	1612	30.0	4231	False	AATAAA	-28
PB.11155.1	chr8	-	2395	5	novel_not_in_catalog	TTPA	novel	283	2	NA	NA	-68	-28	any annotated donor/acceptor	FALSE	canonical	1	340	junction_1	8439.75907165009	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	101	907	85.0	-20	False	NA	NA
PB.11155.2	chr8	-	2359	5	full-splice_match	TTPA	ENST00000260116.4	2338	5	-49	28	-49	-28	multi-exon	FALSE	canonical	1	13173	junction_3	5416.572232510151	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	82	918	85.0	-1	True	NA	NA
PB.8263.8	chr3	+	2083	19	novel_not_in_catalog	TBC1D23	novel	587	5	NA	NA	0	-20	any annotated donor/acceptor	FALSE	canonical	1	5679	junction_17	70197.75522827996	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	20	2080	75.0	8	True	CATAAA	-44
PB.8263.9	chr3	+	3493	18	novel_in_catalog	TBC1D23	novel	587	5	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	1331	junction_3	73029.38287185233	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	513	1913	25.0	9	True	AATAAA	-29
PB.8263.4	chr3	+	2255	18	full-splice_match	TBC1D23	ENST00000344949.9	3656	18	-8	1409	-7	151	multi-exon	FALSE	canonical	1	120028	junction_14	52534.727986766986	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	27	2081	10.0	1	True	AGTAAA	-11
PB.8263.5	chr3	+	2129	19	full-splice_match	TBC1D23	ENST00000394144.8	3677	19	-19	1567	-7	-20	multi-exon	FALSE	canonical	1	204626	junction_4	40840.47812080317	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	27	2126	75.0	1	True	CATAAA	-44
PB.8263.6	chr3	+	1729	1	genic	TBC1D23	novel	NA	NA	NA	NA	-5	-21326	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	3	True	NA	NA
PB.10186.1	chr6	+	2974	2	full-splice_match	PLN	ENST00000357525.5	2001	2	12	-985	12	985	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	12	True	ATTAAA	-21
PB.172.30	chr1	-	2976	3	full-splice_match	SRSF10	ENST00000485292.1	790	3	4	-2190	0	1670	multi-exon	FALSE	canonical	1	321080	junction_1	274732.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	AATGAA	-23
PB.8263.1	chr3	+	3679	19	full-splice_match	TBC1D23	ENST00000394144.8	3677	19	-6	4	5	0	multi-exon	FALSE	canonical	1	204626	junction_4	40840.47812080317	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	14	2113	40.0	14	True	AATAAA	-15
PB.8263.2	chr3	+	3536	18	novel_in_catalog	TBC1D23	novel	587	5	NA	NA	-8	-3	no_combination_of_known_junctions	FALSE	canonical	1	4823	junction_10	71364.3637127423	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	28	1956	25.0	0	True	AATAAA	-29
PB.8263.3	chr3	+	3051	19	full-splice_match	TBC1D23	ENST00000394144.8	3677	19	-20	646	-8	-642	multi-exon	FALSE	canonical	1	204626	junction_4	40840.47812080317	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	28	2127	15.0	0	True	TATAAA	-21
PB.4982.1	chr17	+	2301	4	full-splice_match	NKIRAS2	ENST00000449471.8	1461	4	-37	-803	-3	-5	multi-exon	FALSE	canonical	1	39187	junction_3	252300.60614671538	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	151	558	25.0	-3	True	AATAAA	-16
PB.4982.2	chr17	+	2370	5	full-splice_match	NKIRAS2	ENST00000485789.5	997	5	-2	-1371	-2	-5	multi-exon	FALSE	canonical	1	34585	junction_3	227249.50927050976	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	1991	2296	25.0	4	True	AATAAA	-16
PB.4982.3	chr17	+	1584	4	full-splice_match	NKIRAS2	ENST00000393885.8	1909	4	41	284	-5	0	multi-exon	FALSE	canonical	1	283009	junction_1	151129.49717892785	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	128	703	80.0	-3	True	NA	NA
PB.4982.4	chr17	+	2442	4	full-splice_match	NKIRAS2	ENST00000393885.8	1909	4	45	-578	-1	-5	multi-exon	FALSE	canonical	1	283009	junction_1	151129.49717892785	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	124	699	25.0	1	True	AATAAA	-16
PB.4982.5	chr17	+	2505	4	full-splice_match	NKIRAS2	ENST00000393880.5	1644	4	1	-862	1	-5	multi-exon	FALSE	canonical	1	12617	junction_1	267662.4310536605	NA	1	NA	TRUE	NA	NA	NA	C	coding	191	576	187	762	25.0	3	True	AATAAA	-16
PB.446.4	chr1	-	6760	48	novel_not_in_catalog	DOCK7	novel	3678	8	NA	NA	3	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_40	52525.46790890438	NA	50	4	TRUE	NA	NA	NA	C	coding	2093	6282	78	6359	25.0	2	True	ATTAAA	-19
PB.6419.1	chr2	-	3658	19	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	33	-2437	no_combination_of_known_junctions	FALSE	canonical	1	51261	junction_18	70661.51875658812	NA	0	NA	TRUE	NA	NA	NA	B	coding	890	2673	751	3423	25.0	-4	True	TATAAA	-17
PB.446.1	chr1	-	6818	48	full-splice_match	DOCK7	ENST00000635123.1	6297	48	-120	-401	-16	0	multi-exon	FALSE	canonical	1	58653	junction_47	47512.70661468705	NA	0	NA	TRUE	NA	NA	NA	C	coding	2098	6297	121	6417	25.0	-41	True	ATTAAA	-19
PB.446.2	chr1	-	6913	49	full-splice_match	DOCK7	ENST00000454575.6	6985	49	-111	183	-18	0	multi-exon	FALSE	canonical	1	30265	junction_27	54217.847844555756	NA	0	NA	TRUE	NA	NA	NA	C	coding	2129	6390	123	6512	25.0	-43	True	ATTAAA	-19
PB.446.3	chr1	-	6940	49	novel_in_catalog	DOCK7	novel	3678	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	26355	junction_16	57630.375110479414	NA	0	NA	TRUE	NA	NA	NA	C	coding	2138	6417	123	6539	25.0	-43	True	ATTAAA	-19
PB.1983.10	chr11	+	3003	10	incomplete-splice_match	BEST1	ENST00000524926.5	2404	11	-9	620	-2	-453	3prime_fragment	FALSE	canonical	0	0	junction_7	53583.16444924713	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	114	1421	65.0	-2	True	NA	NA
PB.1983.11	chr11	+	2879	8	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-2	248	intron_retention	FALSE	canonical	1	12603	junction_1	54592.884182718866	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	760	2436	20.0	-2	True	NA	NA
PB.1983.12	chr11	+	2840	9	full-splice_match	BEST1	ENST00000449131.6	4267	9	-19	1446	-2	-225	multi-exon	FALSE	canonical	1	12603	junction_1	53148.2117183577	NA	2	NA	TRUE	NA	NA	NA	C	coding	604	1815	106	1920	30.0	-2	True	AATGAA	-11
PB.1983.13	chr11	+	2612	9	full-splice_match	BEST1	ENST00000449131.6	4267	9	-19	1674	-2	-453	multi-exon	FALSE	canonical	1	12603	junction_1	53148.2117183577	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	106	1920	65.0	-2	True	NA	NA
PB.1983.14	chr11	+	2546	10	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-2	-13	intron_retention	FALSE	canonical	1	8821	junction_2	51439.568817913314	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	948	2387	20.0	-2	True	GATAAA	-11
PB.1983.15	chr11	+	2538	9	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	12603	junction_1	52348.718659103775	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	760	2199	15.0	-2	True	AATAAA	-15
PB.1983.16	chr11	+	2413	11	full-splice_match	BEST1	ENST00000524926.5	2404	11	-9	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_7	51260.20641394258	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	114	1421	15.0	-2	True	AATAAA	-15
PB.1983.17	chr11	+	2342	7	novel_in_catalog	BEST1	novel	2740	11	NA	NA	-2	2	intron_retention	FALSE	canonical	1	5729	junction_5	16657.925351015354	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	1360	2001	20.0	-2	True	AATAAA	-17
PB.1983.18	chr11	+	2210	11	full-splice_match	BEST1	ENST00000378043.8	2740	11	530	0	-2	0	multi-exon	FALSE	canonical	1	8821	junction_2	49919.0789638591	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	114	1871	15.0	-2	True	AATAAA	-15
PB.1983.19	chr11	+	4134	9	novel_in_catalog	BEST1	novel	2740	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	55574.706679247305	NA	7	NA	TRUE	NA	NA	NA	C	coding	329	990	943	1932	15.0	3	True	AATAAA	-15
PB.3294.2	chr14	+	1560	14	full-splice_match	METTL17	ENST00000557550.6	1529	14	-23	-8	0	-4	multi-exon	FALSE	canonical	1	210063	junction_3	200190.10528051792	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	530	1426	35.0	0	True	AATAAA	-13
PB.7733.1	chr22	+	4085	11	full-splice_match	HMGXB4	ENST00000216106.5	4047	11	-6	-32	3	-11	multi-exon	FALSE	canonical	1	89484	junction_1	75099.96843201733	NA	11	NA	TRUE	NA	NA	NA	A	coding	601	1806	135	1940	25.0	-6	True	AATAAA	-34
PB.4685.1	chr17	-	2350	6	full-splice_match	CXCL16	ENST00000293778.10	2222	6	-137	9	-34	-9	multi-exon	TRUE	canonical	1	287395	junction_1	36496.53069758823	NA	0	NA	TRUE	NA	NA	NA	A	coding	273	822	561	1382	40.0	-3	True	NA	NA
PB.9139.3	chr5	+	3090	1	full-splice_match	AC091965.5	ENST00000624785.1	342	1	-1120	-1628	-1120	1628	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	31	True	AGTAAA	-18
PB.8128.16	chr3	+	3034	24	novel_not_in_catalog	RBM6	novel	2342	21	NA	NA	22544	18917	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	293019.4531505808	NA	6	2	TRUE	NA	NA	NA	C	coding	643	1932	597	2528	5.0	-18	True	AAGAAA	-15
PB.9139.2	chr5	+	5384	1	full-splice_match	AC091965.5	ENST00000624785.1	342	1	-1130	-3912	-1130	3912	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	21	True	NA	NA
PB.9952.1	chr6	+	5896	13	novel_not_in_catalog	BRPF3	novel	6052	13	NA	NA	-51	-1	any annotated donor/acceptor	FALSE	canonical	1	1497	junction_1	51490.87098268542	NA	0	NA	TRUE	NA	NA	NA	A	coding	1205	3618	102	3719	10.0	-7357	False	AATAAA	-14
PB.6499.2	chr2	+	6734	8	novel_in_catalog	MDH1	novel	893	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	2570999	junction_2	547115.1962179184	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	5661	6527	30.0	0	True	AATAAA	-15
PB.6756.9	chr2	+	4447	25	novel_in_catalog	R3HDM1	novel	539	3	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	24304	junction_14	120782.23134719195	NA	0	NA	TRUE	NA	NA	NA	C	coding	1021	3066	412	3477	30.0	-20	True	AATAAA	-8
PB.621.12	chr1	-	2448	5	full-splice_match	SLC16A1	ENST00000369626.7	3910	5	158	1304	-14	874	multi-exon	FALSE	canonical	1	712275	junction_4	230041.21876089944	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	206	1708	30.0	-1	True	ATTAAA	-25
PB.3294.1	chr14	+	1572	14	full-splice_match	METTL17	ENST00000556670.6	1500	14	-77	5	-63	-3	multi-exon	FALSE	canonical	1	22929	junction_13	225199.9127685938	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	94	1437	35.0	-9383	False	AATAAA	-14
PB.951.4	chr1	-	4005	4	full-splice_match	KIAA0040	ENST00000423313.5	4564	4	2	557	2	-557	multi-exon	FALSE	canonical	1	121717	junction_3	34108.99860740564	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	536	835	45.0	296	False	AATAAA	-9
PB.951.6	chr1	-	3186	1	incomplete-splice_match	KIAA0040	ENST00000619513.1	4340	2	6012	557	6012	-557	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	153	462	100	561	45.0	-51	False	AATAAA	-9
PB.951.1	chr1	-	4551	4	full-splice_match	KIAA0040	ENST00000423313.5	4564	4	17	-4	-1	4	multi-exon	FALSE	canonical	1	121717	junction_3	34108.99860740564	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	521	820	15.0	-1	True	NA	NA
PB.621.11	chr1	-	2862	5	full-splice_match	SLC16A1	ENST00000369626.7	3910	5	156	892	-16	-887	multi-exon	FALSE	canonical	1	712275	junction_4	230041.21876089944	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	208	1710	35.0	-3	True	AATAAA	-13
PB.951.3	chr1	-	3983	4	full-splice_match	KIAA0040	ENST00000444639.5	4494	4	-46	557	10	-557	multi-exon	FALSE	canonical	1	14769	junction_3	79379.83480428488	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	514	813	45.0	-3	True	AATAAA	-9
PB.1630.4	chr10	-	3418	18	full-splice_match	NT5C2	ENST00000343289.9	3435	18	16	1	8	-1	multi-exon	FALSE	canonical	1	38249	junction_17	184103.9186595985	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	80	1765	25.0	-19	True	AATAAA	-34
PB.410.2	chr1	+	3795	10	full-splice_match	PRPF38A	ENST00000257181.9	5274	10	-3	1482	-3	-1482	multi-exon	FALSE	canonical	1	243586	junction_5	113717.44295119384	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	190	1128	90.0	-3	True	NA	NA
PB.2063.1	chr11	-	2541	11	full-splice_match	RELA	ENST00000406246.7	2700	11	154	5	4	0	multi-exon	TRUE	canonical	1	470433	junction_10	177274.56981033686	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	109	1764	15.0	3	True	AATAAA	-17
PB.2063.2	chr11	-	3224	10	full-splice_match	RELA	ENST00000525693.5	3183	10	-43	2	6	-1	multi-exon	FALSE	canonical	1	470433	junction_9	181840.14644336165	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	107	1240	15.0	5	True	AATAAA	-15
PB.2063.3	chr11	-	2484	12	novel_not_in_catalog	RELA	novel	2700	11	NA	NA	-4	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	276982.19415936986	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	117	1772	15.0	-5	True	AATAAA	-15
PB.2063.4	chr11	-	2224	12	full-splice_match	RELA	ENST00000612991.4	2266	12	37	5	9	-2	multi-exon	TRUE	canonical	1	234	junction_1	276928.9044005923	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	104	1450	15.0	8	True	AATAAA	-14
PB.10377.1	chr7	+	3105	16	novel_in_catalog	AP5Z1	novel	2667	16	NA	NA	5	-1	intron_retention	TRUE	canonical	1	155878	junction_4	52511.252001663626	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	1050	2741	35.0	-8	True	AGTAAA	-14
PB.6394.1	chr2	+	2206	1	antisense	novelGene_ALK_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	3193	False	ATTAAA	-23
PB.7640.1	chr22	-	3813	18	novel_in_catalog	TOP3B	novel	2863	18	NA	NA	1	-1	intron_retention	FALSE	canonical	1	67464	junction_12	57852.535058534486	NA	2	NA	TRUE	NA	NA	NA	C	coding	594	1785	649	2433	5.0	-3	True	ATTAAA	-21
PB.7640.2	chr22	-	3737	17	novel_in_catalog	TOP3B	novel	2863	18	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	103478	junction_16	41837.149921927565	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	165	2357	5.0	-9	True	ATTAAA	-21
PB.7640.3	chr22	-	3042	19	novel_in_catalog	TOP3B	novel	2863	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	18414	junction_18	68292.65544743248	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	366	2954	5.0	-3	True	ATTAAA	-21
PB.7640.4	chr22	-	2917	19	novel_in_catalog	TOP3B	novel	2863	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	67464	junction_13	58322.47972255341	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	649	2829	5.0	-3	True	ATTAAA	-21
PB.7640.5	chr22	-	2812	18	full-splice_match	TOP3B	ENST00000357179.9	2863	18	50	1	0	-1	multi-exon	TRUE	canonical	1	103478	junction_17	44688.02939131343	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	136	2724	5.0	20	True	ATTAAA	-21
PB.7640.6	chr22	-	3012	20	novel_not_in_catalog	TOP3B	novel	2863	18	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	2799	junction_2	79461.68228513973	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	644	2362	15.0	2	True	ATTAAA	-14
PB.7640.7	chr22	-	2843	12	novel_in_catalog	TOP3B	novel	2863	18	NA	NA	1	715	intron_retention	FALSE	canonical	1	103478	junction_11	44922.57859992139	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	159	1601	20.0	-3	True	AATACA	-15
PB.4457.2	chr16	+	2614	20	full-splice_match	KATNB1	ENST00000379661.7	2664	20	49	1	-12	-1	multi-exon	FALSE	canonical	1	173902	junction_1	66606.96718517251	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	344	2311	10.0	-2	True	ATTAAA	-18
PB.4457.1	chr16	+	2664	20	novel_in_catalog	KATNB1	novel	2664	20	NA	NA	-10	0	intron_retention	FALSE	canonical	1	79515	junction_16	83064.95662113425	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	342	2360	10.0	0	True	ATTAAA	-19
PB.7430.1	chr20	+	2948	20	novel_in_catalog	PRPF6	novel	3044	21	NA	NA	-26	-2	no_combination_of_known_junctions	FALSE	canonical	1	16137	junction_14	296595.9953201028	NA	27	3	TRUE	NA	NA	NA	C	coding	901	2706	138	2843	20.0	-1940	False	ATTAAA	-22
PB.2557.4	chr12	+	2950	9	novel_not_in_catalog	TMEM117	novel	591	2	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	1355	junction_2	17190.719956109315	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	726	1865	25.0	-14	True	AATAAA	-16
PB.2557.5	chr12	+	2616	7	full-splice_match	TMEM117	ENST00000551577.5	2643	7	26	1	11	-1	multi-exon	TRUE	canonical	1	1141	junction_6	15851.770652061416	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	117	923	25.0	28	True	AATAAA	-16
PB.267.3	chr1	+	4164	10	novel_in_catalog	AZIN2	novel	778	5	NA	NA	1	2742	combination_of_known_junctions	FALSE	canonical	1	8041	junction_9	19005.29975273629	NA	1	NA	TRUE	NA	NA	NA	B	coding	362	1089	333	1421	35.0	1	True	NA	NA
PB.2557.1	chr12	+	2792	8	full-splice_match	TMEM117	ENST00000266534.7	2758	8	-33	-1	-18	-1	multi-exon	FALSE	canonical	1	25593	junction_1	6791.385876420878	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	161	1705	20.0	-16	True	AATAAA	-18
PB.2557.2	chr12	+	3193	9	novel_not_in_catalog	TMEM117	novel	591	2	NA	NA	-197	-1	any annotated donor/acceptor	FALSE	canonical	1	1823	junction_4	16847.64662673618	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	994	2106	20.0	-372	False	AATAAA	-18
PB.2557.3	chr12	+	2031	8	full-splice_match	TMEM117	ENST00000266534.7	2758	8	-17	744	-2	-744	multi-exon	FALSE	canonical	1	25593	junction_1	6791.385876420878	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	145	1689	40.0	0	True	ATTAAA	-20
PB.1494.1	chr10	-	3677	1	antisense	novelGene_PPIF_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	188	567	283	849	40.0	-3168	False	NA	NA
PB.2767.10	chr12	-	1831	1	novel_in_catalog	KRR1	novel	10118	10	NA	NA	7	-3256	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-6	True	NA	NA
PB.7430.6	chr20	+	2573	18	incomplete-splice_match	PRPF6	ENST00000266079.4	3044	21	12271	2	12271	-2	5prime_fragment	FALSE	canonical	1	605556	junction_10	193177.29999083967	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	39	2468	20.0	NA	False	ATTAAA	-22
PB.3208.38	chr13	-	6285	1	novel_in_catalog	EDNRB	novel	4471	8	NA	NA	-1	-13014	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	166	501	228	728	65.0	-1	True	NA	NA
PB.3208.39	chr13	-	4005	1	novel_in_catalog	EDNRB	novel	4471	8	NA	NA	2274	-13019	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	3056	False	NA	NA
PB.11295.21	chr8	+	2068	1	novel_in_catalog	OXR1	novel	3599	15	NA	NA	-38	-14270	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-6	True	GGGGCT	-16
PB.1630.9	chr10	-	3367	19	novel_not_in_catalog	NT5C2	novel	3365	17	NA	NA	0	-132	any annotated donor/acceptor	FALSE	canonical	1	43681	junction_18	206284.3188589746	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	160	1845	20.0	-1	True	AATAAA	-21
PB.11295.23	chr8	+	2486	6	full-splice_match	OXR1	ENST00000449762.6	2621	6	141	-6	-32	3	multi-exon	FALSE	canonical	1	51991	junction_1	107745.3236936063	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	92	742	45.0	0	True	ACTAAA	-42
PB.11295.22	chr8	+	2551	7	full-splice_match	OXR1	ENST00000297447.10	1944	7	44	-651	-34	-12	multi-exon	FALSE	canonical	1	23452	junction_1	103922.0656594001	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	94	825	70.0	-2	True	ACTAAA	-24
PB.1533.2	chr10	+	4630	2	full-splice_match	AL365434.1	ENST00000412362.1	380	2	-35	-4215	-35	4215	multi-exon	FALSE	canonical	1	25454	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	45	138	246	383	45.0	-8312	False	AATAAA	-11
PB.1533.1	chr10	+	5375	2	full-splice_match	AL365434.1	ENST00000412362.1	380	2	-68	-4927	-68	4927	multi-exon	FALSE	canonical	1	25454	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	137	414	3	416	35.0	0	True	AATAAA	-30
PB.1630.8	chr10	-	3540	20	novel_in_catalog	NT5C2	novel	3365	17	NA	NA	8	-132	combination_of_known_junctions	FALSE	canonical	1	38249	junction_19	247586.64303773036	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	906	2018	20.0	-19	True	AATAAA	-21
PB.3208.35	chr13	-	3107	6	incomplete-splice_match	EDNRB	ENST00000626030.1	1571	7	-29	1793	2	-9	3prime_fragment	FALSE	canonical	1	178263	junction_5	21036.15566209758	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	256	1485	45.0	1	True	AATAAA	-15
PB.3208.36	chr13	-	3184	4	novel_not_in_catalog	EDNRB	novel	4471	8	NA	NA	-369	-10090	any annotated donor/acceptor	FALSE	canonical	1	60	junction_3	16950.683316282233	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	553	1047	55.0	-556	False	AATAAA	-2
PB.465.46	chr1	-	2193	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	15	4468	-1	107	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	1	1	TRUE	NA	NA	NA	C	coding	387	1164	101	1264	35.0	1	True	TTTAAA	-10
PB.7037.30	chr2	+	3779	16	full-splice_match	ACSL3	ENST00000392066.7	3147	16	231	-863	147	863	multi-exon	FALSE	canonical	1	314472	junction_2	230567.5178005976	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	219	2348	95.0	-469	False	NA	NA
PB.7037.31	chr2	+	3850	15	novel_in_catalog	ACSL3	novel	5679	17	NA	NA	10	856	combination_of_known_junctions	FALSE	canonical	1	22181	junction_1	281269.3793909305	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	297	2426	90.0	0	True	NA	NA
PB.5914.10	chr19	+	2042	18	full-splice_match	GPI	ENST00000356487.10	2040	18	3	-5	3	1	multi-exon	FALSE	canonical	1	3163243	junction_1	876700.4205803354	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	69	1745	15.0	3	True	AATAAA	-20
PB.5914.11	chr19	+	4354	9	incomplete-splice_match	GPI	ENST00000647446.1	2020	17	8	15300	8	5165	3prime_fragment	FALSE	canonical	1	3163243	junction_1	596708.2715188386	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	38	1018	100.0	-1567	False	NA	NA
PB.2377.8	chr11	-	2610	1	novel_in_catalog	NCAPD3	novel	5539	35	NA	NA	8	-688	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-17	True	NA	NA
PB.5688.2	chr19	-	1838	6	full-splice_match	ZNF562	ENST00000453372.6	2111	6	-53	326	-11	108	multi-exon	FALSE	canonical	1	68221	junction_5	10074.97000293301	NA	1	1	TRUE	NA	NA	NA	C	coding	426	1281	214	1494	15.0	-18	True	NA	NA
PB.9061.4	chr4	-	3347	5	full-splice_match	CBR4	ENST00000306193.7	3443	5	93	3	-85	-3	multi-exon	FALSE	canonical	1	166075	junction_1	60034.10876066622	NA	4	NA	TRUE	NA	NA	NA	C	coding	237	714	77	790	30.0	4170	False	AATAAA	-16
PB.7037.34	chr2	+	3075	17	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	10	-81	any annotated donor/acceptor	FALSE	canonical	1	10329	junction_16	325190.0750384304	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	463	2460	35.0	0	True	NA	NA
PB.4677.5	chr17	-	9880	55	novel_in_catalog	ZZEF1	novel	11456	55	NA	NA	4	-1575	combination_of_known_junctions	FALSE	canonical	1	88342	junction_54	48993.085439848786	NA	1	NA	TRUE	NA	NA	NA	B	coding	2962	8889	122	9010	15.0	-4	True	AGTAAA	-17
PB.9874.32	chr6	-	3696	27	novel_not_in_catalog	BAG6	novel	488	2	NA	NA	2	-12	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_26	572438.8769278994	NA	1	NA	TRUE	NA	NA	NA	C	coding	1162	3489	118	3606	10.0	14	True	AATAAA	-18
PB.4677.1	chr17	-	11457	55	novel_in_catalog	ZZEF1	novel	11456	55	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	88342	junction_54	48993.085439848786	NA	0	NA	TRUE	NA	NA	NA	B	coding	2962	8889	126	9014	10.0	-8	True	AATATA	-25
PB.2377.7	chr11	-	8355	35	novel_not_in_catalog	NCAPD3	novel	1226	2	NA	NA	8	-7	any annotated donor/acceptor	FALSE	canonical	1	12263	junction_3	99517.16789727783	NA	2	NA	TRUE	NA	NA	NA	C	coding	1419	4260	58	4317	35.0	-17	True	AATAAA	-11
PB.11274.46	chr8	-	2337	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	1	-15	intron_retention	FALSE	canonical	1	32967	junction_9	2091134.424720876	NA	40	1	TRUE	NA	NA	NA	C	coding	590	1773	504	2276	55.0	0	True	AAGAAA	-36
PB.1190.8	chr1	+	3246	16	novel_not_in_catalog	GALNT2	novel	692	7	NA	NA	18	-2037	any annotated donor/acceptor	FALSE	canonical	1	7975	junction_11	271606.87296114827	NA	2	NA	TRUE	NA	NA	NA	C	coding	456	1371	55	1425	15.0	-11	True	TATAAA	-21
PB.1190.9	chr1	+	4579	17	novel_not_in_catalog	GALNT2	novel	692	7	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	2098	junction_1	319754.4916794991	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	292	1914	15.0	0	True	AATAAA	-20
PB.11274.42	chr8	-	2273	16	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-14	intron_retention	FALSE	canonical	1	31534	junction_15	2055197.8070154856	NA	2	1	TRUE	NA	NA	NA	C	coding	604	1815	397	2211	55.0	-2	True	AAGAAA	-37
PB.7037.36	chr2	+	2634	17	full-splice_match	ACSL3	ENST00000357430.7	5679	17	102	2943	10	-128	multi-exon	FALSE	canonical	1	231016	junction_3	274418.0201148138	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	463	2592	60.0	0	True	NA	NA
PB.11274.40	chr8	-	2220	16	full-splice_match	PABPC1	ENST00000519004.5	2401	16	-1	182	-1	4	multi-exon	FALSE	canonical	1	1560	junction_15	1973158.3940595973	NA	3	NA	TRUE	NA	NA	NA	C	coding	591	1776	365	2140	70.0	-2	True	AAGAAA	-35
PB.11274.41	chr8	-	2471	15	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_13	1910421.5170940198	NA	13	1	TRUE	NA	NA	NA	C	coding	479	1440	957	2396	55.0	-2	True	AAGAAA	-30
PB.1190.2	chr1	+	2773	16	full-splice_match	GALNT2	ENST00000366672.4	4454	16	2	1679	2	-1675	multi-exon	FALSE	canonical	1	463193	junction_3	181909.65861066553	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	71	1786	50.0	-27	True	ATTAAA	-17
PB.1190.3	chr1	+	4352	16	full-splice_match	GALNT2	ENST00000366672.4	4454	16	-14	116	-14	-112	multi-exon	FALSE	canonical	1	463193	junction_3	181909.65861066553	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	87	1802	35.0	-43	True	AATATA	-18
PB.7037.37	chr2	+	1947	13	incomplete-splice_match	ACSL3	ENST00000357430.7	5679	17	102	15725	10	1861	3prime_fragment	FALSE	canonical	1	231016	junction_3	263065.05758244323	NA	59	8	TRUE	NA	NA	NA	C	coding	495	1485	463	1947	55.0	0	True	NA	NA
PB.1190.6	chr1	+	2489	1	novel_in_catalog	GALNT2	novel	692	7	NA	NA	6	-22330	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	141	426	584	1009	50.0	-23	True	NA	NA
PB.763.10	chr1	+	1530	6	full-splice_match	CHTOP	ENST00000368694.7	2096	6	31	535	0	301	multi-exon	FALSE	canonical	1	336844	junction_3	144477.93825633032	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	TTTAAA	-18
PB.6575.3	chr2	+	1711	4	full-splice_match	DOK1	ENST00000340004.6	1722	4	6	5	-1	-5	multi-exon	FALSE	canonical	1	46118	junction_3	84652.09403723507	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	476	1279	35.0	-13	True	ATTAAA	-15
PB.1190.5	chr1	+	4289	17	novel_not_in_catalog	GALNT2	novel	692	7	NA	NA	5	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	264529.6529628106	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	68	1783	10.0	-24	True	AATAAA	-25
PB.4484.6	chr16	-	4411	7	novel_in_catalog	KIAA0895L	novel	512	2	NA	NA	-14	0	intron_retention	FALSE	canonical	1	38331	junction_5	46023.89087836157	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	864	1742	15.0	-14	True	NA	NA
PB.4484.5	chr16	-	4448	7	novel_in_catalog	KIAA0895L	novel	512	2	NA	NA	-3	0	intron_retention	FALSE	canonical	1	74820	junction_5	37009.987899664775	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	901	1779	15.0	-3	True	NA	NA
PB.4484.4	chr16	-	3505	8	novel_not_in_catalog	KIAA0895L	novel	512	2	NA	NA	-21	2	intron_retention	FALSE	canonical	1	276	junction_3	58559.406729318864	NA	2	1	TRUE	NA	NA	NA	C	coding	292	879	871	1749	10.0	-21	True	NA	NA
PB.4484.3	chr16	-	3521	8	novel_in_catalog	KIAA0895L	novel	512	2	NA	NA	-1	0	intron_retention	FALSE	canonical	1	38874	junction_3	44754.90220236055	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	899	2314	15.0	-1	True	NA	NA
PB.4484.2	chr16	-	3940	6	novel_in_catalog	KIAA0895L	novel	512	2	NA	NA	-7	2	intron_retention	TRUE	canonical	1	70964	junction_5	41342.30485785716	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	389	1267	10.0	6513	False	NA	NA
PB.4484.1	chr16	-	3458	7	full-splice_match	KIAA0895L	ENST00000563902.1	2233	7	-101	-1124	-2	-2	multi-exon	FALSE	canonical	1	38874	junction_3	48199.80233707742	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	838	2253	20.0	6064	False	NA	NA
PB.7370.1	chr20	+	1586	8	full-splice_match	RTF2	ENST00000395881.7	1572	8	-19	5	4	-4	multi-exon	FALSE	canonical	1	41982	junction_6	525743.0711882847	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	104	796	5.0	-119	False	AATAAA	-17
PB.3932.8	chr15	-	2557	16	novel_in_catalog	DPP8	novel	8699	20	NA	NA	-8	-10	no_combination_of_known_junctions	FALSE	canonical	1	474	junction_8	76922.67445330335	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	216	2225	75.0	-1	True	NA	NA
PB.7370.2	chr20	+	2768	11	novel_in_catalog	RTF2	novel	1745	10	NA	NA	16	-2	intron_retention	FALSE	canonical	1	18268	junction_2	739051.4092045897	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	1286	2149	5.0	-27	True	AATAAA	-19
PB.4484.9	chr16	-	3555	7	novel_in_catalog	KIAA0895L	novel	2824	3	NA	NA	-27	177	intron_retention	FALSE	canonical	1	38331	junction_5	46023.89087836157	NA	3	NA	TRUE	NA	NA	NA	C	coding	292	879	877	1755	10.0	-27	True	AATAGA	-19
PB.4484.8	chr16	-	2629	8	novel_not_in_catalog	KIAA0895L	novel	2824	3	NA	NA	-19	182	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	58625.69927314561	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	869	1741	10.0	-19	True	AATAGA	-24
PB.7370.3	chr20	+	1722	8	novel_in_catalog	RTF2	novel	1745	10	NA	NA	16	-4	intron_retention	FALSE	canonical	1	1392527	junction_3	106651.5813905356	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	69	773	5.0	-27	True	AATAAA	-17
PB.12157.8	chrX	+	8480	23	full-splice_match	ATP7A	ENST00000341514.10	8483	23	-3	6	-3	0	multi-exon	FALSE	canonical	1	45137	junction_1	14808.338714085196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1500	4503	159	4661	25.0	6	True	NA	NA
PB.12157.9	chrX	+	4893	23	novel_not_in_catalog	ATP7A	novel	8289	22	NA	NA	-1	-3501	any annotated donor/acceptor	FALSE	canonical	1	4125	junction_4	20444.38281519437	NA	0	NA	TRUE	NA	NA	NA	C	coding	1472	4419	157	4575	70.0	8	True	NA	NA
PB.12157.6	chrX	+	5653	23	full-splice_match	ATP7A	ENST00000341514.10	8483	23	-19	2849	-19	-2843	multi-exon	FALSE	canonical	1	45137	junction_1	14808.338714085196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1500	4503	175	4677	15.0	-10	True	ATTAAA	-45
PB.12157.7	chrX	+	4985	23	full-splice_match	ATP7A	ENST00000341514.10	8483	23	-9	3507	-9	-3501	multi-exon	FALSE	canonical	1	45137	junction_1	14808.338714085196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1500	4503	165	4667	70.0	0	True	NA	NA
PB.12157.4	chrX	+	2438	2	full-splice_match	AL356235.1	ENST00000602791.1	2363	2	-66	-9	-66	9	multi-exon	FALSE	canonical	1	23397	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-18	False	NA	NA
PB.12157.5	chrX	+	5362	23	full-splice_match	ATP7A	ENST00000341514.10	8483	23	-22	3143	-22	-3137	multi-exon	FALSE	canonical	1	45137	junction_1	14808.338714085196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1500	4503	178	4680	25.0	-13	True	ATTAAA	-20
PB.12157.2	chrX	+	8160	24	novel_in_catalog	ATP7A	novel	8289	22	NA	NA	-32	-439	no_combination_of_known_junctions	TRUE	canonical	1	7592	junction_2	22269.290703365517	NA	2	NA	TRUE	NA	NA	NA	C	coding	1500	4503	278	4780	0.0	-69	False	AATAAA	-20
PB.12157.3	chrX	+	5050	24	novel_in_catalog	ATP7A	novel	8289	22	NA	NA	16	-3501	no_combination_of_known_junctions	FALSE	canonical	1	7592	junction_2	22269.290703365517	NA	0	NA	TRUE	NA	NA	NA	C	coding	1500	4503	230	4732	70.0	-21	False	NA	NA
PB.12157.1	chrX	+	8011	23	full-splice_match	ATP7A	ENST00000341514.10	8483	23	23	449	-13	-443	multi-exon	FALSE	canonical	1	45137	junction_1	14808.338714085196	NA	1	NA	TRUE	NA	NA	NA	C	coding	1500	4503	133	4635	5.0	32	True	AATAAA	-16
PB.12226.1	chrX	+	3781	3	novel_not_in_catalog	HTR2C	novel	3288	7	NA	NA	252107	3	any annotated donor/acceptor	FALSE	canonical	1	302	junction_1	496.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	159	480	653	1132	25.0	NA	False	ATTAAA	-18
PB.10491.7	chr7	+	1655	10	full-splice_match	STARD3NL	ENST00000396013.5	1365	10	-1	-289	-1	0	multi-exon	FALSE	canonical	1	62650	junction_2	251196.47530897867	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	186	890	15.0	-22	True	ATTAAA	-15
PB.6499.4	chr2	+	1776	4	full-splice_match	MDH1	ENST00000485781.5	893	4	356	-1239	2	-392	multi-exon	FALSE	canonical	1	2570999	junction_3	230031.03841631653	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	80	493	95.0	2	True	AATGAA	-34
PB.12226.2	chrX	+	3842	4	novel_not_in_catalog	HTR2C	novel	3288	7	NA	NA	252160	-1	any annotated donor/acceptor	FALSE	canonical	1	89	junction_1	534.8912662089995	NA	1	NA	TRUE	NA	NA	NA	B	coding	229	690	508	1197	25.0	NA	False	ATTAAA	-14
PB.11230.10	chr8	-	1408	7	full-splice_match	PIP4P2	ENST00000285419.7	2970	7	202	1360	10	368	multi-exon	FALSE	canonical	1	212716	junction_6	29898.726266069152	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	114	887	30.0	-14	True	NA	NA
PB.11203.13	chr8	-	2969	5	incomplete-splice_match	TPD52	ENST00000379096.9	4041	6	-12	5468	3	-1996	3prime_fragment	FALSE	canonical	1	739869	junction_1	140905.52174307258	NA	3	NA	TRUE	NA	NA	NA	C	coding	161	486	128	613	100.0	-7	True	NA	NA
PB.3932.5	chr15	-	2861	19	novel_in_catalog	DPP8	novel	8699	20	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	1	22616	junction_3	54266.262875721535	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	217	2712	20.0	-2	True	AATAAA	-19
PB.3065.11	chr13	-	3360	5	novel_not_in_catalog	RNF6	novel	1105	6	NA	NA	6	-8	any annotated donor/acceptor	FALSE	canonical	1	2808	junction_4	128835.23015270318	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	262	2319	50.0	-1	True	AATAAA	-5
PB.11080.1	chr8	-	3828	5	full-splice_match	FUT10	ENST00000327671.9	3825	5	281	-284	-7	284	multi-exon	FALSE	canonical	1	58070	junction_4	30736.177315990353	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	352	1791	20.0	-25	True	AATAAA	-23
PB.3065.13	chr13	-	3003	5	full-splice_match	RNF6	ENST00000381570.7	3398	5	-101	496	6	-496	multi-exon	FALSE	canonical	1	6239	junction_4	127599.43854377848	NA	2	1	TRUE	NA	NA	NA	C	coding	685	2058	393	2450	20.0	-1	True	NA	NA
PB.3065.12	chr13	-	3319	5	full-splice_match	RNF6	ENST00000381588.8	3706	5	184	203	-48	-196	multi-exon	FALSE	canonical	1	132688	junction_4	87645.13716402069	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	409	2466	25.0	4	True	ATTAAA	-14
PB.3065.15	chr13	-	2630	5	full-splice_match	RNF6	ENST00000381588.8	3706	5	170	906	-62	-899	multi-exon	FALSE	canonical	1	132688	junction_4	87645.13716402069	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	423	2480	70.0	-10	True	TTTAAA	-7
PB.3065.14	chr13	-	2381	5	full-splice_match	RNF6	ENST00000346166.7	3282	5	-11	912	-11	-899	multi-exon	FALSE	canonical	1	94736	junction_4	98148.28579501528	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	174	2231	70.0	-50	True	TTTAAA	-7
PB.10491.4	chr7	+	1810	10	novel_not_in_catalog	STARD3NL	novel	1728	9	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	canonical	1	2307	junction_2	276667.32247316296	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	342	1046	10.0	10	True	ATTAAA	-14
PB.11429.5	chr9	-	3869	17	full-splice_match	RFX3	ENST00000617270.4	9253	17	15	5369	-3	-5369	multi-exon	FALSE	canonical	1	38075	junction_12	12197.9776703392	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	249	2498	80.0	5	True	NA	NA
PB.3617.1	chr14	-	3245	2	novel_not_in_catalog	GPR68	novel	2859	2	NA	NA	800	-2	any annotated donor/acceptor	FALSE	canonical	1	4142	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	A	coding	375	1128	700	1827	20.0	-5	True	AATAAA	-12
PB.8128.11	chr3	+	2664	6	novel_not_in_catalog	RBM6	novel	2342	21	NA	NA	22527	2136	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	284563.22726550594	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	165	596	60.0	-35	True	NA	NA
PB.1221.20	chr1	-	4327	14	incomplete-splice_match	NID1	ENST00000264187.6	5864	20	-7	13747	-7	-13747	3prime_fragment	FALSE	canonical	1	165915	junction_3	45523.67090131639	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	91	3033	35.0	2817	False	NA	NA
PB.9061.1	chr4	-	3340	4	novel_in_catalog	CBR4	novel	1198	6	NA	NA	-12	3	no_combination_of_known_junctions	FALSE	canonical	1	6731	junction_1	105973.9268730233	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	199	777	20.0	4048	False	AATAAA	-22
PB.10491.2	chr7	+	1376	10	full-splice_match	STARD3NL	ENST00000396013.5	1365	10	21	-32	-4	32	multi-exon	FALSE	canonical	1	62650	junction_2	251196.47530897867	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	164	868	10.0	0	True	AATAAA	-18
PB.1534.12	chr10	+	3573	9	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	18	-3349	no_combination_of_known_junctions	FALSE	canonical	1	16684	junction_2	147255.66166450104	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	334	909	30.0	-3	True	AATAAA	-22
PB.1534.13	chr10	+	3672	10	full-splice_match	PCGF5	ENST00000336126.5	7018	10	-5	3351	0	-3349	multi-exon	FALSE	canonical	1	174893	junction_8	98102.52408690729	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	238	1008	30.0	0	True	AATAAA	-22
PB.1534.10	chr10	+	3517	8	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	12	-3351	no_combination_of_known_junctions	FALSE	canonical	1	16684	junction_2	163822.47852801284	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	340	855	35.0	-9	True	AATAAA	-20
PB.1534.11	chr10	+	945	3	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	15	-29	combination_of_known_junctions	FALSE	canonical	1	81476	junction_1	143011.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-6	True	AATAAA	-6
PB.1534.16	chr10	+	4353	10	full-splice_match	PCGF5	ENST00000336126.5	7018	10	-158	2823	-153	-2821	multi-exon	FALSE	canonical	1	174893	junction_8	98102.52408690729	NA	2	NA	TRUE	NA	NA	NA	C	coding	256	771	391	1161	20.0	0	True	CATAAA	-15
PB.1534.17	chr10	+	3633	8	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	-120	-3351	no_combination_of_known_junctions	FALSE	canonical	1	16684	junction_2	154011.20429967664	NA	19	NA	TRUE	NA	NA	NA	C	coding	171	516	456	971	35.0	-9	True	AATAAA	-20
PB.1534.14	chr10	+	7081	9	novel_in_catalog	PCGF5	novel	7037	10	NA	NA	-188	-68	no_combination_of_known_junctions	FALSE	canonical	1	98722	junction_8	113117.74290085696	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	426	1136	15.0	-4	True	ATTAAA	-17
PB.1534.15	chr10	+	7010	10	full-splice_match	PCGF5	ENST00000336126.5	7018	10	-61	69	-56	-67	multi-exon	FALSE	canonical	1	174893	junction_8	98102.52408690729	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	294	1064	15.0	4	True	ATTAAA	-18
PB.9207.1	chr5	-	1783	1	novel_in_catalog	AC025171.1	novel	608	3	NA	NA	448	-50453	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	480	False	AATAAA	-21
PB.1534.19	chr10	+	3606	9	novel_not_in_catalog	PCGF5	novel	7037	10	NA	NA	-2	-3349	any annotated donor/acceptor	FALSE	canonical	1	16596	junction_4	132241.68404992193	NA	2	NA	TRUE	NA	NA	NA	C	coding	235	708	235	942	30.0	3	True	AATAAA	-22
PB.1927.4	chr11	-	2109	11	full-splice_match	ACP2	ENST00000256997.7	2203	11	92	2	0	-2	multi-exon	FALSE	canonical	1	303277	junction_4	49941.401736034604	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	26	1297	5.0	-10	True	AATGAA	-25
PB.1927.5	chr11	-	2039	11	novel_not_in_catalog	ACP2	novel	2203	11	NA	NA	-8	-2	any annotated donor/acceptor	FALSE	canonical	1	11423	junction_1	114492.7728031774	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	39	1343	5.0	12	False	AATGAA	-25
PB.1927.1	chr11	-	2640	9	novel_in_catalog	ACP2	novel	2203	11	NA	NA	4	-1	intron_retention	TRUE	canonical	1	303277	junction_4	37064.552872109154	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	1240	1827	5.0	6	True	AATGAA	-26
PB.1927.2	chr11	-	2625	9	novel_in_catalog	ACP2	novel	2203	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	303277	junction_4	54051.977128356506	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	1225	1812	5.0	-9	True	AATGAA	-26
PB.1927.3	chr11	-	2050	11	novel_not_in_catalog	ACP2	novel	2203	11	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	9045	junction_1	115141.82198680025	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	17	1237	5.0	-1	True	AATGAA	-26
PB.6314.1	chr2	+	1739	6	full-splice_match	PQLC3	ENST00000441908.6	1784	6	29	16	29	-16	multi-exon	FALSE	canonical	1	52005	junction_5	77791.94776839053	NA	2	NA	TRUE	NA	NA	NA	C	coding	188	567	147	713	35.0	-103	False	AATAAA	-14
PB.724.10	chr1	+	2352	15	novel_in_catalog	TARS2	novel	2188	14	NA	NA	0	-22	combination_of_known_junctions	FALSE	canonical	1	29133	junction_12	102831.0569836392	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	32	1840	75.0	-15	True	NA	NA
PB.10462.2	chr7	-	1703	13	full-splice_match	CPVL	ENST00000396276.7	1739	13	30	6	30	0	multi-exon	FALSE	canonical	1	21962	junction_12	112087.69414499994	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	150	1568	30.0	67	True	AATAAA	-12
PB.5265.20	chr17	-	2449	17	novel_in_catalog	EXOC7	novel	4596	18	NA	NA	-6	2	intron_retention	FALSE	canonical	1	414710	junction_11	152124.93333297636	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	73	1458	15.0	-11	True	GATAAA	-19
PB.5265.21	chr17	-	2266	20	full-splice_match	EXOC7	ENST00000634349.1	2124	20	-70	-72	-4	0	multi-exon	FALSE	canonical	1	101557	junction_13	261391.47432394684	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	71	2194	10.0	-9	True	GATAAA	-17
PB.5265.22	chr17	-	2784	16	novel_in_catalog	EXOC7	novel	4596	18	NA	NA	-5	0	intron_retention	FALSE	canonical	1	414710	junction_10	157089.63521576536	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	72	1457	5.0	-10	True	GATAAA	-16
PB.5265.23	chr17	-	2975	6	full-splice_match	EXOC7	ENST00000405068.3	2958	6	-17	0	-2	0	multi-exon	FALSE	canonical	1	561933	junction_5	99551.55279150598	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	69	920	100.0	-7	True	NA	NA
PB.5265.24	chr17	-	2853	6	full-splice_match	EXOC7	ENST00000405068.3	2958	6	-58	163	-43	-163	multi-exon	FALSE	canonical	1	561933	junction_5	99551.55279150598	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	110	961	75.0	-48	False	NA	NA
PB.10796.3	chr7	+	3818	5	full-splice_match	MDFIC	ENST00000393486.5	4393	5	112	463	54	-463	multi-exon	FALSE	canonical	1	118054	junction_1	136314.91123314426	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	274	1014	35.0	-5	True	AATACA	-18
PB.10796.2	chr7	+	3668	5	novel_not_in_catalog	MDFIC	novel	4598	5	NA	NA	-60	-464	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	171889.7729891165	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	125	865	35.0	-4	True	AATACA	-17
PB.10796.1	chr7	+	3496	4	novel_not_in_catalog	MDFIC	novel	4598	5	NA	NA	-5535	-462	any annotated donor/acceptor	FALSE	canonical	1	902	junction_1	187934.91348218283	NA	4	1	TRUE	NA	NA	NA	C	coding	191	576	116	691	30.0	0	True	AATACA	-19
PB.739.1	chr1	+	3099	1	novel_in_catalog	TNFAIP8L2	novel	1178	2	NA	NA	14	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	coding	228	687	1924	2610	45.0	-6	True	AATAAA	-7
PB.4085.10	chr15	+	3439	6	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	0	-11	intron_retention	FALSE	canonical	1	53419	junction_1	70381.8601516044	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	1034	1387	40.0	-5	True	NA	NA
PB.7885.20	chr22	-	6477	38	novel_in_catalog	PLXNB2	novel	1916	8	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	7417	junction_26	465034.66089368594	NA	25	3	TRUE	NA	NA	NA	C	coding	1861	5586	168	5753	5.0	-1	True	AATACA	-17
PB.7885.21	chr22	-	6273	36	novel_not_in_catalog	PLXNB2	novel	1916	8	NA	NA	-5219	-1	intron_retention	FALSE	non_canonical	0	0	junction_35	438468.07320106705	NA	7	2	TRUE	NA	NA	NA	C	coding	1825	5478	72	5549	5.0	9325	False	AATACA	-17
PB.9879.1	chr6	-	1327	7	full-splice_match	DDAH2	ENST00000375792.7	1688	7	358	3	3	-3	multi-exon	FALSE	canonical	1	417137	junction_6	272846.38346064906	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	274	1131	15.0	-33	True	AATAAA	-17
PB.9879.2	chr6	-	3594	12	novel_in_catalog	DDAH2	novel	724	6	NA	NA	-5949	-3	intron_retention	FALSE	canonical	1	5863	junction_11	1975393.1578736631	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	135	860	15.0	1488	False	AATAAA	-17
PB.4085.11	chr15	+	3236	7	incomplete-splice_match	RCCD1	ENST00000394258.6	2689	8	14	2	0	-2	intron_retention	FALSE	canonical	1	53419	junction_1	75672.7031424733	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	189	1175	40.0	-5	True	NA	NA
PB.7028.1	chr2	+	3081	9	full-splice_match	DNAJB2	ENST00000336576.9	3176	9	95	0	-4	0	multi-exon	FALSE	canonical	1	318082	junction_1	193965.80876342615	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	194	1168	0.0	-4	True	AATAAA	-20
PB.7028.2	chr2	+	1832	9	novel_not_in_catalog	DNAJB2	novel	3176	9	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	280686.69136812934	NA	4	1	TRUE	NA	NA	NA	C	coding	248	747	187	933	0.0	3	True	AATAAA	-16
PB.7028.3	chr2	+	1911	10	full-splice_match	DNAJB2	ENST00000392086.8	1946	10	34	1	9	-1	multi-exon	FALSE	canonical	1	318082	junction_1	209455.27633228077	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	178	1011	0.0	12	True	AATAAA	-17
PB.7028.4	chr2	+	5026	6	novel_in_catalog	DNAJB2	novel	3176	9	NA	NA	-46	-1	intron_retention	FALSE	canonical	1	318082	junction_1	196191.42881420685	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	2583	3119	5.0	1	True	AATAAA	-14
PB.6453.7	chr2	+	4471	2	full-splice_match	SOCS5	ENST00000394861.2	4058	2	60	-473	60	-343	multi-exon	FALSE	canonical	1	53951	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	234	1826	30.0	-19	True	AATACA	-24
PB.5912.14	chr19	+	2264	11	full-splice_match	LSM14A	ENST00000433627.9	3424	11	-35	1195	8	-3	multi-exon	FALSE	canonical	1	253280	junction_7	398291.83467904537	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	111	1502	30.0	8	True	AATAAA	-16
PB.6453.6	chr2	+	3236	2	full-splice_match	SOCS5	ENST00000394861.2	4058	2	122	700	122	-700	multi-exon	FALSE	canonical	1	53951	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	172	1764	25.0	-18	False	AATAAA	-23
PB.5912.12	chr19	+	2305	1	novel_in_catalog	LSM14A	novel	559	4	NA	NA	0	-21837	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	149	450	119	568	40.0	0	True	AATAAA	-26
PB.1517.8	chr10	-	2970	10	full-splice_match	ATAD1	ENST00000308448.11	4640	10	-14	1684	-14	-79	multi-exon	FALSE	canonical	1	102402	junction_9	147357.84445883957	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	394	1479	60.0	18	True	AATACA	-8
PB.5912.11	chr19	+	3402	10	novel_not_in_catalog	LSM14A	novel	559	4	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	19342	junction_9	461505.47914503556	NA	18	NA	TRUE	NA	NA	NA	C	coding	468	1407	124	1530	55.0	-5	True	AATAAA	-8
PB.1517.5	chr10	-	4363	10	full-splice_match	ATAD1	ENST00000308448.11	4640	10	-63	340	-63	-340	multi-exon	FALSE	canonical	1	102402	junction_9	147357.84445883957	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	443	1528	15.0	-31	True	AATAAA	-14
PB.1517.4	chr10	-	3997	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-65	-336	any annotated donor/acceptor	FALSE	canonical	1	132168	junction_6	132309.85500243522	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	73	1158	10.0	-33	True	AATAAA	-18
PB.1517.7	chr10	-	2824	11	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-52	16	any annotated donor/acceptor	FALSE	canonical	1	164	junction_2	174095.55687391906	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	60	932	15.0	-20	True	AATAAA	-31
PB.1517.6	chr10	-	4350	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-4	-341	any annotated donor/acceptor	FALSE	canonical	1	1651	junction_9	164104.405437815	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	431	1516	15.0	28	True	AATAAA	-13
PB.1517.1	chr10	-	4795	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-65	470	any annotated donor/acceptor	FALSE	canonical	1	61	junction_2	158781.0726951491	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	73	939	90.0	-33	True	NA	NA
PB.1517.3	chr10	-	4635	10	full-splice_match	ATAD1	ENST00000308448.11	4640	10	-1	6	-1	-6	multi-exon	FALSE	canonical	1	102402	junction_9	147357.84445883957	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	381	1466	45.0	31	True	ATTAAA	-13
PB.1517.2	chr10	-	4309	10	novel_not_in_catalog	ATAD1	novel	4640	10	NA	NA	-43	-2	any annotated donor/acceptor	FALSE	canonical	1	132168	junction_6	132309.85500243522	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	51	1136	40.0	-11	True	ATTAAA	-17
PB.9924.5	chr6	-	3052	6	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	394961.64593084226	NA	9	1	TRUE	NA	NA	NA	C	coding	316	951	38	988	25.0	-10	True	AATAAA	-21
PB.466.2	chr1	+	1581	3	novel_in_catalog	GADD45A	novel	1496	4	NA	NA	-7	0	intron_retention	FALSE	canonical	1	721991	junction_2	21932.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	182	549	474	1022	10.0	-7	True	AATAAA	-21
PB.11837.1	chr9	-	2347	5	incomplete-splice_match	SH3GLB2	ENST00000416629.5	1415	10	16379	-411	185	0	5prime_fragment	FALSE	canonical	1	878472	junction_4	241437.17124233377	NA	0	NA	TRUE	NA	NA	NA	A	coding	125	378	1325	1702	15.0	NA	False	AATAAA	-16
PB.6453.3	chr2	+	4294	2	full-splice_match	SOCS5	ENST00000394861.2	4058	2	119	-355	119	355	multi-exon	FALSE	canonical	1	53951	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	175	1767	25.0	-21	False	AAAAAG	-27
PB.6453.2	chr2	+	4044	2	full-splice_match	SOCS5	ENST00000394861.2	4058	2	4	10	4	-10	multi-exon	FALSE	canonical	1	53951	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	290	1882	55.0	-136	False	AATAAA	-10
PB.4085.18	chr15	+	1847	8	novel_not_in_catalog	RCCD1	novel	2689	8	NA	NA	18	-4	intron_retention	FALSE	canonical	1	7380	junction_3	90826.57150294505	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	171	788	20.0	13	True	NA	NA
PB.466.1	chr1	+	3159	1	novel_in_catalog	GADD45A	novel	1496	4	NA	NA	-23	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	168	507	976	1482	5.0	-2716	False	AATAAA	-24
PB.6152.1	chr19	-	2385	5	full-splice_match	AKT1S1	ENST00000391835.1	3075	5	694	-4	6	-3	multi-exon	FALSE	canonical	1	104617	junction_4	236904.43669864014	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	680	1510	30.0	20	True	ATTAAA	-19
PB.6152.2	chr19	-	1697	5	full-splice_match	AKT1S1	ENST00000391835.1	3075	5	1382	-4	-397	-3	multi-exon	FALSE	canonical	1	104617	junction_4	236904.43669864014	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	28	822	30.0	-1	True	ATTAAA	-19
PB.7111.24	chr2	-	3821	26	novel_not_in_catalog	HDLBP	novel	6372	28	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	976433.1124832472	NA	0	NA	TRUE	NA	NA	NA	C	coding	1020	3063	373	3435	15.0	1	True	AATAAA	-23
PB.295.2	chr1	-	1506	7	full-splice_match	MEAF6	ENST00000296214.9	1525	7	11	8	0	-8	multi-exon	FALSE	canonical	1	349310	junction_2	139418.64213304556	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	18	593	45.0	-10	True	ATTAAA	-10
PB.295.3	chr1	-	1390	7	full-splice_match	MEAF6	ENST00000296214.9	1525	7	0	135	0	-2	multi-exon	FALSE	canonical	1	349310	junction_2	139418.64213304556	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	29	604	20.0	-21	True	AATAAA	-16
PB.295.1	chr1	-	2135	7	full-splice_match	MEAF6	ENST00000296214.9	1525	7	-5	-605	-5	2	multi-exon	TRUE	canonical	1	349310	junction_2	139418.64213304556	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	34	609	5.0	-26	True	AATAAA	-20
PB.2651.9	chr12	+	4741	29	novel_in_catalog	NCKAP1L	novel	9016	31	NA	NA	-18	136	intron_retention	FALSE	canonical	1	280074	junction_7	73589.18210142807	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	2486	4327	20.0	-1038	False	ATTAAA	-15
PB.2651.8	chr12	+	3780	31	novel_not_in_catalog	NCKAP1L	novel	9016	31	NA	NA	-19	151	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	103294.83651357195	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	52	3351	15.0	-1039	False	ATTAAA	-30
PB.2651.5	chr12	+	3486	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	17	5513	17	-48	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	63	3446	30.0	4	True	NA	NA
PB.2651.4	chr12	+	3709	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	43	5264	-4	11	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	1	NA	TRUE	NA	NA	NA	C	coding	1127	3384	37	3420	15.0	2	True	AAAAAG	-23
PB.2651.7	chr12	+	3687	31	novel_not_in_catalog	NCKAP1L	novel	9016	31	NA	NA	-23	0	any annotated donor/acceptor	FALSE	canonical	1	8963	junction_14	102367.24793757142	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	56	3409	25.0	11	True	AAAAAG	-12
PB.2651.6	chr12	+	5752	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	23	3241	23	2034	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	57	3440	70.0	10	True	NA	NA
PB.2651.1	chr12	+	3869	30	novel_in_catalog	AC079313.2	novel	564	4	NA	NA	77878	45412	no_combination_of_known_junctions	FALSE	canonical	1	4422	junction_9	104524.573184938	NA	0	NA	TRUE	NA	NA	NA	A	coding	1108	3327	128	3454	20.0	-1115	False	ATTAAA	-16
PB.2651.3	chr12	+	7126	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	13	1877	13	-1877	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	67	3450	100.0	0	True	NA	NA
PB.2651.2	chr12	+	6003	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	-2	3015	-2	2260	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	82	3465	25.0	-1069	False	NA	NA
PB.1011.24	chr1	-	1800	12	novel_not_in_catalog	UCHL5	novel	5327	11	NA	NA	22	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	247593.44230424624	NA	18	3	TRUE	NA	NA	NA	C	coding	210	633	128	760	15.0	-49	True	AATAAA	-29
PB.11429.4	chr9	-	4145	16	novel_in_catalog	RFX3	novel	9307	18	NA	NA	67	-4948	combination_of_known_junctions	FALSE	canonical	1	12160	junction_12	15897.142124154127	NA	1	NA	TRUE	NA	NA	NA	C	coding	724	2175	179	2353	60.0	31	True	NA	NA
PB.8540.1	chr3	+	2181	1	novel_in_catalog	TTC14	novel	2274	13	NA	NA	5551	-226	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.8488.1	chr3	+	3029	1	antisense	novelGene_CCNL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	122	369	2	370	30.0	-2	True	NA	NA
PB.10523.9	chr7	-	1905	14	full-splice_match	DDX56	ENST00000421223.5	3028	14	1122	1	-4	-1	multi-exon	FALSE	canonical	1	38675	junction_6	383063.5718257086	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	35	1162	20.0	-22	True	AATAAA	-15
PB.9003.9	chr4	+	4624	10	full-splice_match	USP38	ENST00000307017.8	7009	10	41	2344	41	-2344	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	3	NA	TRUE	NA	NA	NA	C	coding	1042	3129	466	3594	25.0	37	True	ATTAAA	-13
PB.10523.8	chr7	-	2023	14	novel_not_in_catalog	DDX56	novel	2336	14	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	5329	junction_9	399202.8323606253	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	33	701	20.0	-20	True	AATAAA	-16
PB.6577.4	chr2	+	5153	18	full-splice_match	HK2	ENST00000409174.1	5278	18	113	12	113	-12	multi-exon	FALSE	canonical	1	5320	junction_5	107212.86729430908	NA	5	NA	TRUE	NA	NA	NA	C	coding	889	2670	78	2747	50.0	859	False	AATAAA	-15
PB.6577.2	chr2	+	5364	18	full-splice_match	HK2	ENST00000290573.6	5772	18	396	12	396	-12	multi-exon	FALSE	canonical	1	5320	junction_5	104030.50403976791	NA	1	NA	TRUE	NA	NA	NA	C	coding	917	2754	205	2958	50.0	-47	False	AATAAA	-15
PB.6577.3	chr2	+	5681	18	novel_not_in_catalog	HK2	novel	5772	18	NA	NA	141	-13	any annotated donor/acceptor	FALSE	canonical	1	5127	junction_12	107033.99897807592	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	460	3276	50.0	-5	True	AATAAA	-14
PB.6577.1	chr2	+	5609	19	novel_not_in_catalog	HK2	novel	5772	18	NA	NA	67	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	105015.07520623402	NA	5	NA	TRUE	NA	NA	NA	C	coding	917	2754	534	3287	50.0	-376	False	AATAAA	-15
PB.6577.8	chr2	+	4130	10	incomplete-splice_match	HK2	ENST00000409174.1	5278	18	43517	12	24354	-12	5prime_fragment	FALSE	canonical	1	11571	junction_9	120166.43717602783	NA	2	NA	TRUE	NA	NA	NA	C	coding	561	1686	39	1724	50.0	8666	False	AATAAA	-15
PB.6454.6	chr2	+	5112	20	full-splice_match	TTC7A	ENST00000319190.9	5157	20	45	0	45	0	multi-exon	FALSE	canonical	1	142388	junction_17	49681.081408544625	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	324	2900	25.0	-10	True	ATTAAA	-27
PB.6402.16	chr2	+	4652	12	novel_in_catalog	SLC30A6	novel	4758	13	NA	NA	4	-7	no_combination_of_known_junctions	FALSE	canonical	1	6025	junction_2	53137.87678209481	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	110	1273	10.0	4	True	ATTAAA	-26
PB.6402.15	chr2	+	5074	14	novel_not_in_catalog	SLC30A6	novel	4758	13	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	12201	junction_1	46420.25073597225	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	451	1689	25.0	2	True	ATTAAA	-32
PB.6402.14	chr2	+	2187	1	novel_in_catalog	SLC30A6	novel	4758	13	NA	NA	1	-24895	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	5	True	NA	NA
PB.6402.13	chr2	+	5825	14	full-splice_match	SLC30A6	ENST00000282587.9	5089	14	2	-738	2	738	multi-exon	FALSE	canonical	1	91258	junction_1	29624.684274751322	NA	21	1	TRUE	NA	NA	NA	C	coding	461	1386	36	1421	35.0	1	True	ATTAAA	-31
PB.6402.12	chr2	+	3439	13	novel_in_catalog	SLC30A6	novel	4758	13	NA	NA	2	1040	combination_of_known_junctions	FALSE	canonical	1	37001	junction_8	45114.49861763769	NA	1	1	TRUE	NA	NA	NA	C	coding	264	795	578	1372	40.0	1	True	NA	NA
PB.6402.11	chr2	+	4738	13	full-splice_match	SLC30A6	ENST00000435660.5	4776	13	25	13	2	0	multi-exon	FALSE	canonical	1	10383	junction_12	50923.54620265724	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	36	1352	25.0	1	True	ATTAAA	-33
PB.6402.10	chr2	+	4884	15	novel_not_in_catalog	SLC30A6	novel	4758	13	NA	NA	2	-21	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	62929.07612222619	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	587	1519	45.0	1	True	ATTAAA	-12
PB.3133.1	chr13	-	2979	1	antisense	novelGene_DGKH_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	187	564	652	1215	30.0	-120	False	ATTAAA	-12
PB.803.3	chr1	+	1924	9	full-splice_match	RUSC1	ENST00000368347.8	2503	9	577	2	1	0	multi-exon	FALSE	canonical	1	25686	junction_1	163793.7158958926	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	82	1383	15.0	7	True	AATAAA	-13
PB.3133.2	chr13	-	2386	1	antisense	novelGene_DGKH_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	187	564	648	1211	20.0	-116	False	ATTAAA	-17
PB.6454.8	chr2	+	4401	19	novel_in_catalog	TTC7A	novel	3033	21	NA	NA	-43	-3	combination_of_known_junctions	FALSE	canonical	1	10666	junction_15	76074.41556783499	NA	3	NA	TRUE	NA	NA	NA	C	coding	819	2460	311	2770	25.0	3	True	AATAAA	-21
PB.6454.9	chr2	+	3776	13	novel_in_catalog	TTC7A	novel	3033	21	NA	NA	149	-19	no_combination_of_known_junctions	FALSE	canonical	1	7402	junction_7	91137.47822974031	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	36	1583	35.0	-6995	False	ATTAAA	-8
PB.9003.3	chr4	+	4507	10	full-splice_match	USP38	ENST00000307017.8	7009	10	39	2463	39	-2463	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	2	NA	TRUE	NA	NA	NA	C	coding	1042	3129	468	3596	30.0	35	True	AGTAAA	-20
PB.281.5	chr1	-	816	6	full-splice_match	PSMB2	ENST00000373237.3	2701	6	326	1559	326	-509	multi-exon	FALSE	canonical	1	2372591	junction_2	270937.32889035426	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	87	692	15.0	0	True	AATAAA	-17
PB.281.4	chr1	-	2139	6	full-splice_match	PSMB2	ENST00000373237.3	2701	6	325	237	325	-237	multi-exon	FALSE	canonical	1	2372591	junction_2	270937.32889035426	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	88	693	25.0	-1	True	ATTAAA	-17
PB.281.1	chr1	-	1988	7	novel_not_in_catalog	PSMB2	novel	4217	5	NA	NA	284	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1018510.9469795845	NA	13	NA	TRUE	NA	NA	NA	C	coding	201	606	129	734	30.0	-42	True	CATAAA	-16
PB.281.3	chr1	-	2374	6	full-splice_match	PSMB2	ENST00000373237.3	2701	6	325	2	325	-2	multi-exon	FALSE	canonical	1	2372591	junction_2	270937.32889035426	NA	5	NA	TRUE	NA	NA	NA	C	coding	201	606	88	693	20.0	-1	True	ATTAAA	-16
PB.281.2	chr1	-	1825	6	novel_not_in_catalog	PSMB2	novel	4217	5	NA	NA	283	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1104869.3593627077	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	130	747	25.0	-43	True	ATTAAA	-17
PB.11499.3	chr9	-	2830	12	full-splice_match	SMU1	ENST00000397149.3	7122	12	-32	4324	-32	-4324	multi-exon	FALSE	canonical	1	110256	junction_7	184835.58098487565	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	84	1625	40.0	-21	True	AAGAAA	-28
PB.5734.2	chr19	+	2873	4	full-splice_match	ZNF700	ENST00000254321.9	2882	4	12	-3	12	3	multi-exon	FALSE	canonical	1	46513	junction_1	39358.99659120729	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	132	2360	35.0	5	True	AATAAA	-28
PB.11020.10	chr8	+	3420	14	novel_not_in_catalog	PPP3CC	novel	1598	8	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	27033	junction_8	97846.18837983183	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	332	1309	20.0	1	True	AATAAA	-18
PB.6252.1	chr19	+	2499	4	full-splice_match	ZNF211	ENST00000240731.4	2440	4	-61	2	0	-1	multi-exon	FALSE	canonical	1	21760	junction_1	28763.199033950772	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	181	1914	15.0	-1	True	AATAAA	-18
PB.8209.1	chr3	-	919	8	full-splice_match	THOC7	ENST00000295899.9	990	8	69	2	34	-1	multi-exon	FALSE	canonical	1	459595	junction_7	493390.11319640285	NA	0	NA	TRUE	NA	NA	NA	A	coding	204	615	45	659	25.0	-30	True	AATAAA	-15
PB.9874.30	chr6	-	3750	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	1	386632	junction_24	549012.2017141695	NA	1	NA	TRUE	NA	NA	NA	C	coding	1113	3342	319	3660	10.0	8064	False	AATAAA	-18
PB.533.3	chr1	-	1980	4	full-splice_match	ZNF644	ENST00000361321.5	1253	4	146	-873	-45	-8	multi-exon	FALSE	canonical	1	31628	junction_2	119472.61061943119	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	177	494	65.0	163	False	AATAAA	-10
PB.6221.1	chr19	+	2978	2	full-splice_match	ZNF628	ENST00000591164.1	472	2	-28	-2478	-28	-385	multi-exon	FALSE	canonical	1	28386	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	920	2760	217	2976	10.0	-3	True	NA	NA
PB.5734.1	chr19	+	2825	3	novel_in_catalog	ZNF700	novel	2882	4	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	6158	junction_2	20177.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	509	2311	35.0	-7	True	AATAAA	-29
PB.10398.1	chr7	+	2098	1	incomplete-splice_match	ZNF316	ENST00000382252.5	5392	9	17009	4	12446	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-9643	False	AATAAA	-13
PB.533.5	chr1	-	5532	6	full-splice_match	ZNF644	ENST00000337393.9	5763	6	114	117	-60	-115	multi-exon	FALSE	canonical	1	100675	junction_5	72882.7609778883	NA	1	NA	TRUE	NA	NA	NA	C	coding	1302	3909	245	4153	40.0	148	False	AATAAA	-14
PB.10398.2	chr7	+	1726	1	incomplete-splice_match	ZNF316	ENST00000382252.5	5392	9	17383	2	12820	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	71	216	214	429	25.0	-9269	False	AATAAA	-15
PB.6929.1	chr2	+	1518	1	novel_in_catalog	SATB2-AS1	novel	468	4	NA	NA	1899	1361	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	115	348	1	348	25.0	-9085	False	AATAAA	-21
PB.533.4	chr1	-	2199	4	full-splice_match	ZNF644	ENST00000347275.9	2036	4	-171	8	97	-8	multi-exon	FALSE	canonical	1	13028	junction_3	136968.87048117496	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	396	713	65.0	661	False	AATAAA	-10
PB.9709.2	chr6	+	2909	7	full-splice_match	CDYL	ENST00000397588.7	2184	7	92	-817	85	-474	multi-exon	FALSE	canonical	1	105037	junction_1	65285.331228257804	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	258	1892	65.0	99	False	ATTAAA	-17
PB.9709.3	chr6	+	3178	7	novel_not_in_catalog	CDYL	novel	3419	9	NA	NA	439	3	any annotated donor/acceptor	FALSE	canonical	1	940	junction_1	99025.28808003203	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	442	1680	15.0	453	False	AATAAA	-30
PB.11770.3	chr9	+	5019	11	full-splice_match	PTGS1	ENST00000362012.7	5020	11	0	1	0	-1	multi-exon	FALSE	canonical	1	117828	junction_2	65843.41963241277	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	62	1861	10.0	0	True	NA	NA
PB.9709.1	chr6	+	3389	7	full-splice_match	CDYL	ENST00000397588.7	2184	7	86	-1291	79	0	multi-exon	FALSE	canonical	1	105037	junction_1	65285.331228257804	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	264	1898	20.0	93	False	AATAAA	-23
PB.533.7	chr1	-	5282	7	novel_in_catalog	ZNF644	novel	5702	6	NA	NA	3	-337	intron_retention	FALSE	canonical	1	1557	junction_4	122276.31162930401	NA	14	NA	TRUE	NA	NA	NA	C	coding	1302	3909	217	4125	30.0	-18	True	AATAAA	-18
PB.6974.4	chr2	-	1917	5	novel_in_catalog	METTL21A	novel	869	5	NA	NA	23	-12	combination_of_known_junctions	FALSE	canonical	1	13514	junction_2	81549.5796954221	NA	15	1	TRUE	NA	NA	NA	C	coding	236	711	277	987	100.0	5	True	NA	NA
PB.533.6	chr1	-	5414	6	full-splice_match	ZNF644	ENST00000370440.5	5702	6	-55	343	-55	-337	multi-exon	FALSE	canonical	1	13028	junction_5	102303.38307524342	NA	1	NA	TRUE	NA	NA	NA	C	coding	1302	3909	349	4257	30.0	761	False	AATAAA	-18
PB.3511.1	chr14	-	4007	3	full-splice_match	TMEM229B	ENST00000357461.6	4068	3	60	1	60	-1	multi-exon	FALSE	canonical	1	13503	junction_2	15908.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	351	854	10.0	206	False	CATAAA	-25
PB.6974.7	chr2	-	1717	4	full-splice_match	METTL21A	ENST00000406927.6	1103	4	12	-626	12	-13	multi-exon	FALSE	canonical	1	58039	junction_3	64506.90272107836	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	132	788	100.0	27	False	NA	NA
PB.3511.3	chr14	-	3953	3	novel_not_in_catalog	TMEM229B	novel	2812	9	NA	NA	1408	-4	any annotated donor/acceptor	FALSE	canonical	1	166	junction_2	22577.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	300	803	15.0	1676	False	CATAAA	-22
PB.3511.2	chr14	-	4071	4	full-splice_match	TMEM229B	ENST00000555994.5	523	4	-64	-3484	58	-4	multi-exon	FALSE	canonical	1	2719	junction_3	19730.677878764214	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	418	921	15.0	204	False	CATAAA	-22
PB.533.9	chr1	-	5017	6	full-splice_match	ZNF644	ENST00000337393.9	5763	6	191	555	-9	328	multi-exon	FALSE	canonical	1	100675	junction_5	72882.7609778883	NA	0	NA	TRUE	NA	NA	NA	C	coding	1302	3909	168	4076	30.0	225	False	AATAAA	-20
PB.533.8	chr1	-	5225	6	full-splice_match	ZNF644	ENST00000337393.9	5763	6	199	339	-1	-337	multi-exon	FALSE	canonical	1	100675	junction_5	72882.7609778883	NA	0	NA	TRUE	NA	NA	NA	C	coding	1302	3909	160	4068	30.0	233	False	AATAAA	-18
PB.8971.3	chr4	+	5405	15	novel_not_in_catalog	SPATA5	novel	8137	16	NA	NA	9	-4019	any annotated donor/acceptor	FALSE	canonical	1	8202	junction_14	25595.94589161992	NA	2	NA	TRUE	NA	NA	NA	B	coding	799	2400	61	2460	30.0	-18	True	AAAAAG	-41
PB.5853.23	chr19	-	4187	10	novel_in_catalog	SUGP2	novel	747	6	NA	NA	-5	-77	intron_retention	FALSE	canonical	1	218750	junction_9	123286.47791141765	NA	8	NA	TRUE	NA	NA	NA	C	coding	1092	3279	80	3358	0.0	12	True	AAGAAA	-25
PB.7505.2	chr21	-	4134	1	novel_in_catalog	AP000311.1	novel	1078	8	NA	NA	15787	-327000	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	69	210	141	350	100.0	-1	True	NA	NA
PB.11095.4	chr8	-	3665	8	incomplete-splice_match	NSD3	ENST00000316985.7	3995	10	-19	3336	-19	2	3prime_fragment	FALSE	canonical	1	109607	junction_6	98180.32832913286	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	571	2373	45.0	4054	False	AATAAA	-21
PB.6740.2	chr2	+	2721	1	novel_in_catalog	PTPN18	novel	3669	15	NA	NA	75	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	2186	2497	15.0	-19	True	NA	NA
PB.5853.21	chr19	-	3982	11	full-splice_match	SUGP2	ENST00000452918.6	6176	11	-5	2199	-5	-162	multi-exon	FALSE	canonical	1	218750	junction_10	125232.93275656368	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	80	3328	20.0	12	True	ATTAAA	-13
PB.4207.8	chr16	+	2558	7	full-splice_match	NAA60	ENST00000575076.5	2531	7	-27	0	0	0	multi-exon	FALSE	canonical	1	213204	junction_1	135019.1376679	NA	1	1	TRUE	NA	NA	NA	C	coding	242	729	138	866	15.0	6	True	AATAAA	-15
PB.6740.1	chr2	+	2607	3	full-splice_match	PTPN18	ENST00000481492.1	1394	3	202	-1415	202	-5	multi-exon	FALSE	canonical	1	246367	junction_1	16899.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	92	427	15.0	0	True	NA	NA
PB.4207.6	chr16	+	4101	5	full-splice_match	NAA60	ENST00000648681.1	3899	5	-91	-111	2	0	multi-exon	FALSE	canonical	1	213204	junction_1	144292.87033560424	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	175	756	15.0	-31	True	AATAAA	-15
PB.4207.7	chr16	+	2363	6	novel_in_catalog	AC025283.3	novel	560	5	NA	NA	92907	7402	no_combination_of_known_junctions	FALSE	canonical	1	2019	junction_4	164938.88699321335	NA	0	NA	TRUE	NA	NA	NA	B	coding	190	573	170	742	15.0	-26	True	AATAAA	-15
PB.4207.4	chr16	+	3002	6	full-splice_match	NAA60	ENST00000572584.2	2931	6	-33	-38	0	0	multi-exon	TRUE	canonical	1	213204	junction_1	141164.83633879933	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	177	905	15.0	-33	True	AATAAA	-15
PB.4207.5	chr16	+	2481	6	novel_in_catalog	AC025283.3	novel	560	5	NA	NA	92900	7402	no_combination_of_known_junctions	FALSE	canonical	1	12730	junction_1	203006.7359418401	NA	0	NA	TRUE	NA	NA	NA	B	coding	177	534	256	789	15.0	-33	True	AATAAA	-15
PB.4207.2	chr16	+	3186	8	novel_in_catalog	AC025283.3	novel	560	5	NA	NA	78571	7402	intron_retention	FALSE	canonical	1	14704	junction_1	224072.46691876542	NA	0	NA	TRUE	NA	NA	NA	B	coding	242	729	361	1089	15.0	-23	True	AATAAA	-15
PB.4207.3	chr16	+	2766	9	novel_in_catalog	AC025283.3	novel	560	5	NA	NA	78595	7401	no_combination_of_known_junctions	FALSE	canonical	1	2190	junction_1	211670.10201298507	NA	0	NA	TRUE	NA	NA	NA	B	coding	242	729	347	1075	15.0	1	True	AATAAA	-14
PB.4207.1	chr16	+	2645	8	novel_in_catalog	AC025283.3	novel	560	5	NA	NA	78568	7402	no_combination_of_known_junctions	FALSE	canonical	1	44354	junction_1	196325.06893841518	NA	0	NA	TRUE	NA	NA	NA	B	coding	242	729	225	953	15.0	-26	True	AATAAA	-15
PB.11340.5	chr8	+	3570	2	incomplete-splice_match	MYC	ENST00000377970.6	2351	3	147	10	0	-10	intron_retention	FALSE	canonical	1	916930	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	409	1476	35.0	0	True	AATAAA	-26
PB.11340.4	chr8	+	1601	3	novel_not_in_catalog	MYC	novel	2042	3	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	610426.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	109	1128	20.0	0	True	AATAAA	-33
PB.11340.7	chr8	+	2148	3	novel_in_catalog	MYC	novel	2042	3	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	1	9929	junction_1	605461.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	659	1678	20.0	6	True	AATAAA	-30
PB.7505.1	chr21	-	733	7	full-splice_match	ATP5PO	ENST00000290299.6	932	7	199	0	-2	0	multi-exon	FALSE	canonical	1	2657946	junction_4	636555.0984071519	NA	2	1	TRUE	NA	NA	NA	A	coding	213	642	19	660	15.0	20	True	AATAAA	-20
PB.11340.3	chr8	+	2146	4	novel_in_catalog	MYC	novel	2042	3	NA	NA	164	-2	combination_of_known_junctions	FALSE	canonical	1	1045	junction_1	518453.15148451185	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	353	1672	20.0	-4930	False	AATAAA	-34
PB.11340.2	chr8	+	2101	3	full-splice_match	MYC	ENST00000377970.6	2351	3	248	2	101	-2	multi-exon	FALSE	canonical	1	916930	junction_1	151961.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	308	1627	20.0	-4281	False	AATAAA	-34
PB.920.4	chr1	+	2005	7	full-splice_match	BLZF1	ENST00000367808.7	2749	7	227	517	-40	-517	multi-exon	FALSE	canonical	1	172669	junction_5	31137.31933798341	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	197	1399	55.0	2	True	NA	NA
PB.6821.3	chr2	-	4363	13	incomplete-splice_match	FASTKD1	ENST00000453929.6	2791	14	-75	0	-32	0	intron_retention	FALSE	canonical	1	51887	junction_11	95707.30680787473	NA	2	NA	TRUE	NA	NA	NA	C	coding	790	2373	1921	4293	55.0	-1	True	AATAAA	-17
PB.4880.1	chr17	+	2363	1	incomplete-splice_match	GOSR1	ENST00000225724.9	6039	9	47099	769	4762	-769	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	3263	False	AATAAA	-26
PB.11095.5	chr8	-	1088	2	incomplete-splice_match	NSD3	ENST00000316985.7	3995	10	8	31177	8	502	3prime_fragment	FALSE	canonical	1	173720	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	543	544	1086	80.0	-2	True	AATGAA	-42
PB.6983.1	chr2	+	5773	39	full-splice_match	CPS1	ENST00000430249.6	5698	39	-78	3	-51	-3	multi-exon	TRUE	canonical	1	6012	junction_1	199384.354438644	NA	4	NA	TRUE	NA	NA	NA	C	coding	1500	4503	152	4654	25.0	4	True	AATAAA	-15
PB.10621.2	chr7	+	2539	15	full-splice_match	POR	ENST00000394893.5	2532	15	-9	2	-2	-1	multi-exon	FALSE	canonical	1	73039	junction_1	246705.21411653567	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	30	1931	10.0	-2	True	AATAAA	-14
PB.11187.1	chr8	-	2786	4	full-splice_match	ELOC	ENST00000520242.5	1573	4	77	-1290	0	792	multi-exon	FALSE	canonical	1	249780	junction_1	119005.33111401167	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	145	483	20.0	15	True	AATAAA	-14
PB.920.7	chr1	+	2710	7	full-splice_match	BLZF1	ENST00000367808.7	2749	7	236	-197	-31	197	multi-exon	FALSE	canonical	1	172669	junction_5	31137.31933798341	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	188	1390	75.0	11	True	NA	NA
PB.10621.3	chr7	+	2386	16	novel_not_in_catalog	POR	novel	498	5	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	331831.53886100434	NA	2	1	TRUE	NA	NA	NA	C	coding	662	1989	26	2014	10.0	2	True	AATAAA	-14
PB.4782.2	chr17	-	4229	1	novel_in_catalog	TVP23C-CDRT4	novel	2833	7	NA	NA	27722	-93357	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.5084.1	chr17	-	2550	2	full-splice_match	HOXB9	ENST00000311177.6	2581	2	-15	46	-15	-46	multi-exon	FALSE	canonical	1	83669	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	250	753	103	855	80.0	-32	True	NA	NA
PB.4782.1	chr17	-	2893	8	novel_not_in_catalog	CDRT4	novel	2498	4	NA	NA	-59864	-1	any annotated donor/acceptor	FALSE	canonical	1	341	junction_1	16903.01236889026	NA	1	NA	TRUE	NA	NA	NA	A	coding	152	459	678	1136	10.0	10	True	AATAAA	-20
PB.230.2	chr1	+	2663	10	full-splice_match	GMEB1	ENST00000373816.5	6410	10	-3	3750	-3	538	multi-exon	TRUE	canonical	1	37519	junction_1	33401.79841724353	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	142	1833	100.0	-2	True	NA	NA
PB.154.2	chr1	+	8231	18	full-splice_match	ZBTB40	ENST00000375647.4	8685	18	-15	469	1	-469	multi-exon	FALSE	canonical	1	80492	junction_4	31683.778637675867	NA	1	NA	TRUE	NA	NA	NA	C	coding	1239	3720	223	3942	55.0	1	True	AATAAA	-13
PB.154.3	chr1	+	5027	18	full-splice_match	ZBTB40	ENST00000375647.4	8685	18	-15	3673	1	-3673	multi-exon	FALSE	canonical	1	80492	junction_4	31683.778637675867	NA	0	NA	TRUE	NA	NA	NA	C	coding	1239	3720	223	3942	25.0	1	True	AATATA	-11
PB.6924.5	chr2	+	2662	8	full-splice_match	MOB4	ENST00000323303.8	3986	8	233	1091	-9	-1091	multi-exon	FALSE	canonical	1	257019	junction_2	84749.0601308429	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	23	700	55.0	-1	True	CATAAA	-9
PB.230.4	chr1	+	1920	10	full-splice_match	GMEB1	ENST00000361872.8	1894	10	-9	-17	-9	17	multi-exon	FALSE	canonical	1	9084	junction_1	41375.40542608422	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	99	1790	30.0	-15	True	TTTAAA	-28
PB.1158.10	chr1	+	2409	4	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	10	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	127089.65188488882	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	21	True	AATAAA	-10
PB.1158.11	chr1	+	1453	3	full-splice_match	SRP9	ENST00000304786.11	1480	3	19	8	11	-8	multi-exon	FALSE	canonical	1	1041	junction_2	1439.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	22	True	AATAAA	-10
PB.1158.12	chr1	+	2428	4	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	12	-8	intron_retention	FALSE	canonical	0	0	junction_3	20971.44474968019	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	23	True	AATAAA	-10
PB.1158.13	chr1	+	1564	4	full-splice_match	SRP9	ENST00000366839.8	1596	4	31	1	31	-1	multi-exon	FALSE	canonical	1	3919	junction_1	140675.70600735105	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-7833	False	AATAAA	-17
PB.6901.5	chr2	-	2108	5	full-splice_match	ORMDL1	ENST00000392349.8	1137	5	22	-993	15	4	multi-exon	FALSE	canonical	1	88309	junction_4	310699.47465396527	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	199	660	40.0	243	False	AATAAA	-27
PB.10876.2	chr7	+	2048	17	novel_in_catalog	TTC26	novel	4198	17	NA	NA	1	-3	no_combination_of_known_junctions	FALSE	canonical	1	2727	junction_7	21216.1838248504	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	94	1683	40.0	-13	True	NA	NA
PB.10876.3	chr7	+	4305	18	full-splice_match	TTC26	ENST00000464848.5	4299	18	-4	-2	-2	2	multi-exon	FALSE	canonical	1	43825	junction_5	15439.01746519698	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	85	1749	20.0	-4	True	NA	NA
PB.7953.3	chr3	+	1491	11	full-splice_match	CCDC174	ENST00000383794.6	2942	11	-4	1455	-4	177	multi-exon	FALSE	canonical	1	152186	junction_1	42401.50184616106	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	78	1481	15.0	-2	True	NA	NA
PB.7953.2	chr3	+	2501	9	novel_in_catalog	CCDC174	novel	2720	13	NA	NA	-6	179	intron_retention	TRUE	canonical	1	152186	junction_1	32838.824155829636	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	80	844	10.0	-4	True	NA	NA
PB.7953.1	chr3	+	2942	11	full-splice_match	CCDC174	ENST00000383794.6	2942	11	-6	6	-6	0	multi-exon	FALSE	canonical	1	152186	junction_1	42401.50184616106	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	80	1483	25.0	-4	True	AATAAA	-15
PB.10876.1	chr7	+	2124	18	full-splice_match	TTC26	ENST00000464848.5	4299	18	-14	2189	0	-3	multi-exon	FALSE	canonical	1	43825	junction_5	15439.01746519698	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	95	1759	40.0	-14	True	NA	NA
PB.11711.4	chr9	-	4129	25	novel_in_catalog	PTPN3	novel	587	2	NA	NA	0	-2538	no_combination_of_known_junctions	FALSE	canonical	1	2188	junction_22	38811.59039048631	NA	16	4	TRUE	NA	NA	NA	C	coding	782	2349	463	2811	30.0	-7	True	AATAAA	-15
PB.11161.3	chr8	+	2507	8	full-splice_match	MTFR1	ENST00000262146.8	2640	8	-5	138	0	-138	multi-exon	FALSE	canonical	1	186983	junction_5	43513.04041272206	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	189	1133	55.0	0	True	TTTAAA	-11
PB.6180.4	chr19	+	2203	15	novel_not_in_catalog	PPP2R1A	novel	5380	15	NA	NA	16	-2	any annotated donor/acceptor	FALSE	canonical	1	10846	junction_7	1126371.6893474795	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	31	963	5.0	15	True	AATAAA	-10
PB.6180.1	chr19	+	2251	15	full-splice_match	PPP2R1A	ENST00000322088.10	5380	15	15	3114	3	2	multi-exon	FALSE	canonical	1	1782057	junction_1	861547.2151780546	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	44	1813	5.0	2	True	AATAAA	-14
PB.6180.2	chr19	+	3445	14	novel_in_catalog	PPP2R1A	novel	5380	15	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1782057	junction_1	840884.5759301656	NA	4	NA	TRUE	NA	NA	NA	C	coding	500	1503	1510	3012	10.0	-4	True	AATAAA	-9
PB.6180.3	chr19	+	4036	1	novel_in_catalog	PPP2R1A	novel	5380	15	NA	NA	3	2685	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	2	True	NA	NA
PB.5843.3	chr19	-	1842	11	full-splice_match	ISYNA1	ENST00000338128.12	2420	11	155	423	-3	-2	multi-exon	FALSE	canonical	1	265048	junction_7	261525.14159103326	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	64	1740	5.0	8320	False	AATAAA	-25
PB.5843.2	chr19	-	1910	10	novel_in_catalog	ISYNA1	novel	2039	8	NA	NA	13	0	intron_retention	FALSE	canonical	1	287003	junction_7	248227.4425427884	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	593	1819	10.0	0	True	AATAAA	-14
PB.5843.1	chr19	-	2215	11	full-splice_match	ISYNA1	ENST00000338128.12	2420	11	156	49	-2	-49	multi-exon	FALSE	canonical	1	265048	junction_7	261525.14159103326	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	63	1739	35.0	8321	False	AATACA	-24
PB.5843.7	chr19	-	2129	9	full-splice_match	ISYNA1	ENST00000577916.6	2148	9	19	0	-2	0	multi-exon	FALSE	canonical	1	287003	junction_6	262995.2492313015	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	608	2038	10.0	8321	False	AATAAA	-14
PB.5843.6	chr19	-	2200	8	novel_in_catalog	ISYNA1	novel	2039	8	NA	NA	7	0	intron_retention	FALSE	canonical	1	287003	junction_5	249949.5571876168	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	599	1642	10.0	-6	True	AATAAA	-14
PB.5843.4	chr19	-	2041	10	novel_in_catalog	ISYNA1	novel	2039	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	265048	junction_6	275666.1270251783	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	63	1943	5.0	8321	False	AATAAA	-21
PB.10880.5	chr7	-	6509	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	205474	4166	144769	-4166	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	137	414	1731	2144	90.0	2558	False	NA	NA
PB.10880.4	chr7	-	2887	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	209096	4166	148391	-4166	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	124	375	1540	1914	90.0	6180	False	NA	NA
PB.10880.7	chr7	-	5194	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	206789	4166	146084	-4166	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	137	414	416	829	90.0	1	True	NA	NA
PB.10880.6	chr7	-	1946	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	210037	4166	149332	-4166	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	124	375	599	973	90.0	7121	False	NA	NA
PB.10880.1	chr7	-	4173	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	211974	2	151269	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	105	318	2935	3252	15.0	9058	False	ATTAAA	-17
PB.10880.3	chr7	-	2078	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	214070	1	153365	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	105	318	839	1156	20.0	9117	False	ATTAAA	-18
PB.10880.2	chr7	-	3100	1	incomplete-splice_match	HIPK2	ENST00000406875.7	15049	15	213045	4	152340	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	105	318	1864	2181	15.0	8092	False	ATTAAA	-15
PB.5942.2	chr19	-	2303	14	full-splice_match	CLIP3	ENST00000360535.8	3370	14	8	1059	1	317	multi-exon	FALSE	canonical	1	239681	junction_10	125263.88986484095	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	221	1864	35.0	-13	True	AATAAA	-30
PB.5942.1	chr19	-	3355	14	full-splice_match	CLIP3	ENST00000360535.8	3370	14	15	0	-7	0	multi-exon	TRUE	canonical	1	239681	junction_10	125263.88986484095	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	214	1857	5.0	-6	True	AATAAA	-16
PB.10880.9	chr7	-	4065	15	full-splice_match	HIPK2	ENST00000406875.7	15049	15	-81	11065	-21	-6	multi-exon	FALSE	canonical	1	181467	junction_8	63439.01926199261	NA	3	NA	TRUE	NA	NA	NA	C	coding	1198	3597	177	3773	85.0	325	False	ATTAAA	-30
PB.7080.2	chr2	-	3551	30	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	45721.961473581556	NA	1	1	TRUE	NA	NA	NA	B	coding	1147	3441	111	3551	85.0	7	True	NA	NA
PB.7080.3	chr2	-	3535	30	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	2319	junction_27	40621.70299704949	NA	0	NA	TRUE	NA	NA	NA	B	coding	1143	3429	107	3535	85.0	11	True	NA	NA
PB.7080.1	chr2	-	5700	32	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	2319	junction_29	40595.797344598424	NA	3	NA	TRUE	NA	NA	NA	B	coding	1236	3711	119	3829	5.0	-1	True	AATAAA	-24
PB.10901.1	chr7	+	5493	15	full-splice_match	ARHGEF5	ENST00000056217.9	5544	15	50	1	50	0	multi-exon	FALSE	canonical	1	827	junction_12	33522.545207802825	NA	0	NA	TRUE	NA	NA	NA	A	coding	1597	4794	125	4918	20.0	-21	False	AATAAA	-19
PB.7080.7	chr2	-	1789	13	novel_not_in_catalog	USP40	novel	5616	31	NA	NA	12	-1938	any annotated donor/acceptor	FALSE	canonical	1	2319	junction_10	33559.67409984042	NA	0	NA	TRUE	NA	NA	NA	B	coding	561	1683	107	1789	60.0	11	True	NA	NA
PB.10411.20	chr7	-	2916	14	full-splice_match	ETV1	ENST00000430479.5	6740	14	282	3542	2	-389	multi-exon	FALSE	non_canonical	0	0	junction_4	73410.51829268064	NA	2	NA	TRUE	NA	NA	NA	C	coding	477	1434	387	1820	10.0	1	True	TATAAA	-12
PB.7500.17	chr21	-	3321	20	novel_in_catalog	GART	novel	3341	22	NA	NA	12	-34	intron_retention	FALSE	canonical	1	6415	junction_3	226559.67234060066	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	1139	2722	50.0	9	True	AATAAA	-13
PB.6288.3	chr2	-	4152	5	incomplete-splice_match	EIPR1	ENST00000443925.6	1771	6	-35	2845	5	-2845	3prime_fragment	FALSE	canonical	1	298909	junction_1	19243.764139325758	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	137	814	100.0	-8	True	NA	NA
PB.6049.1	chr19	+	2700	6	full-splice_match	ZNF155	ENST00000407951.6	2222	6	-6	-472	0	0	multi-exon	FALSE	canonical	1	2959	junction_2	28451.482060518396	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	242	1849	5.0	0	True	NA	NA
PB.1708.5	chr10	+	1150	7	full-splice_match	BCCIP	ENST00000299130.7	2337	7	2	1185	2	-1185	multi-exon	FALSE	canonical	1	560198	junction_6	195777.30284638604	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	11	889	35.0	2	True	ATTAAA	-26
PB.1708.4	chr10	+	1431	8	full-splice_match	BCCIP	ENST00000368759.5	1433	8	1	1	1	-1	multi-exon	FALSE	canonical	1	290846	junction_7	291227.3572710882	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	12	980	20.0	1	True	ATTAAA	-17
PB.1708.3	chr10	+	1259	8	full-splice_match	BCCIP	ENST00000368759.5	1433	8	0	174	0	-174	multi-exon	FALSE	canonical	1	290846	junction_7	291227.3572710882	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	13	981	40.0	0	True	ATTAAA	-14
PB.1708.2	chr10	+	1230	7	full-splice_match	BCCIP	ENST00000278100.10	1236	7	-3	9	-3	-9	multi-exon	FALSE	canonical	1	683838	junction_6	157180.92429082058	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	16	960	50.0	-3	True	AATAAA	-20
PB.1708.1	chr10	+	2311	7	full-splice_match	BCCIP	ENST00000299130.7	2337	7	0	26	0	-26	multi-exon	FALSE	canonical	1	560198	junction_6	195777.30284638604	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	13	891	70.0	0	True	NA	NA
PB.9452.1	chr5	-	2343	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	89	7042	1	1361	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	96	587	90.0	0	True	NA	NA
PB.2950.2	chr12	-	1155	2	full-splice_match	TRIAP1	ENST00000546954.1	1182	2	23	4	-19	-4	multi-exon	FALSE	canonical	1	577425	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-7	True	AATAAA	-22
PB.1339.9	chr10	-	2949	9	full-splice_match	ABI1	ENST00000536334.5	3380	9	131	300	15	-1	multi-exon	FALSE	canonical	1	141762	junction_6	296752.76420405926	NA	4	NA	TRUE	NA	NA	NA	C	coding	393	1182	94	1275	35.0	-4	True	AATAAA	-15
PB.1339.8	chr10	-	2937	8	novel_in_catalog	ABI1	novel	3362	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	149523	junction_2	222125.107781858	NA	3	NA	TRUE	NA	NA	NA	C	coding	388	1167	96	1262	40.0	-6	True	AATAAA	-16
PB.9452.5	chr5	-	1323	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	44	8107	-30	296	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	141	632	15.0	3	True	ATTAAA	-15
PB.9452.4	chr5	-	1495	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	43	7936	-31	467	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	142	633	15.0	2	True	AATAAA	-21
PB.9452.7	chr5	-	846	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	89	8539	1	0	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	96	587	5.0	0	True	AATAAA	-29
PB.9452.6	chr5	-	972	6	full-splice_match	SKP1	ENST00000353411.10	9474	6	68	8434	-6	23	multi-exon	FALSE	canonical	1	385637	junction_1	855858.3321687299	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	117	608	45.0	1	True	AATAAA	-10
PB.1339.3	chr10	-	3412	9	novel_in_catalog	ABI1	novel	3362	10	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	1	282716	junction_2	198609.80029491874	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	96	1439	35.0	-6	True	AATAAA	-21
PB.1339.2	chr10	-	3284	9	full-splice_match	ABI1	ENST00000536334.5	3380	9	103	-7	2	4	multi-exon	FALSE	canonical	1	141762	junction_6	296752.76420405926	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	122	1303	35.0	-1	True	AATAAA	-29
PB.1339.1	chr10	-	3536	10	full-splice_match	ABI1	ENST00000376139.6	3516	10	-15	-5	0	5	multi-exon	FALSE	canonical	1	215007	junction_3	227564.63013541157	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	124	1554	35.0	-3	True	AATAAA	-30
PB.1339.6	chr10	-	3114	9	novel_in_catalog	ABI1	novel	3362	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	282716	junction_2	198609.80029491874	NA	2	NA	TRUE	NA	NA	NA	C	coding	447	1344	96	1439	40.0	-6	True	AATAAA	-16
PB.1339.4	chr10	-	3261	8	novel_in_catalog	ABI1	novel	3362	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	149523	junction_2	222125.107781858	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	122	1288	35.0	-1	True	AATAAA	-21
PB.4287.4	chr16	+	2152	12	incomplete-splice_match	VPS35L	ENST00000513947.8	2501	14	-18	6559	-12	979	3prime_fragment	FALSE	canonical	1	147001	junction_1	75173.15679370248	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	23	1072	10.0	5	True	ATTAAA	-20
PB.4287.5	chr16	+	3033	30	novel_in_catalog	VPS35L	novel	570	6	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	13210	junction_24	92217.48121299951	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	12	2825	25.0	16	True	ATTAAA	-15
PB.4287.2	chr16	+	2993	29	novel_in_catalog	VPS35L	novel	570	6	NA	NA	-84	-3	combination_of_known_junctions	FALSE	canonical	1	7796	junction_12	94811.33413330792	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2691	95	2785	25.0	7	True	ATTAAA	-15
PB.4287.3	chr16	+	3567	31	full-splice_match	VPS35L	ENST00000438132.7	3855	31	291	-3	-14	1	multi-exon	FALSE	canonical	1	147001	junction_1	74957.26850238667	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	25	2916	20.0	3	True	AATAAA	-19
PB.4287.1	chr16	+	3118	31	full-splice_match	VPS35L	ENST00000417362.6	3115	31	-7	4	-7	-2	multi-exon	FALSE	canonical	1	147001	junction_1	74957.26850238667	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	18	2909	20.0	10	True	ATTAAA	-16
PB.724.6	chr1	+	2298	17	novel_in_catalog	TARS2	novel	2188	14	NA	NA	1	-13	combination_of_known_junctions	FALSE	canonical	1	29133	junction_14	86602.39110286953	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	37	2091	60.0	-20	True	AATGAA	-6
PB.10097.6	chr6	+	2510	20	full-splice_match	ORC3	ENST00000257789.4	2501	20	-8	-1	-3	1	multi-exon	FALSE	canonical	1	75687	junction_14	70629.89292748056	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	58	2181	20.0	-8	True	AATAAA	-24
PB.10986.4	chr8	-	2790	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2266947.3924711696	NA	4	NA	TRUE	NA	NA	NA	C	coding	339	1020	201	1220	30.0	-1	True	AATAAA	-16
PB.746.6	chr1	-	3370	12	full-splice_match	PI4KB	ENST00000368873.5	3340	12	-27	-3	-19	3	multi-exon	FALSE	canonical	1	98163	junction_9	211079.9332499264	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	197	2647	10.0	-39	True	AATAAA	-18
PB.140.2	chr1	-	2868	15	novel_in_catalog	TMCO4	novel	2974	16	NA	NA	6	-15	intron_retention	FALSE	canonical	1	22794	junction_14	32747.509773294838	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	181	2085	60.0	386	False	NA	NA
PB.140.1	chr1	-	2988	16	full-splice_match	TMCO4	ENST00000294543.10	2974	16	-16	2	7	-2	multi-exon	TRUE	canonical	1	12055	junction_15	40761.42638470292	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	259	2163	20.0	387	False	AATAAA	-41
PB.8853.51	chr4	-	3856	25	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	54702	junction_6	384536.3616174115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3297	149	3445	20.0	9337	False	ATTAAA	-12
PB.746.5	chr1	-	3692	13	full-splice_match	PI4KB	ENST00000368872.5	3331	13	-13	-348	-13	1	multi-exon	FALSE	canonical	1	57828	junction_11	221119.4949672135	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	566	2971	10.0	-33	True	AATAAA	-16
PB.10986.2	chr8	-	3757	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	115	3	0	-3	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	140	1159	30.0	-28	False	AATAAA	-16
PB.6607.4	chr2	+	2836	18	incomplete-splice_match	KDM3A	ENST00000542128.5	4311	27	202	9658	-29	-7107	3prime_fragment	FALSE	canonical	1	72822	junction_1	105118.401599978	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2709	126	2834	40.0	-21	True	AATACA	-3
PB.6607.5	chr2	+	3218	19	incomplete-splice_match	KDM3A	ENST00000542128.5	4311	27	203	7983	-28	-5432	3prime_fragment	FALSE	canonical	1	72822	junction_1	102257.9394289114	NA	0	NA	TRUE	NA	NA	NA	C	coding	1031	3093	125	3217	30.0	-20	True	NA	NA
PB.6607.6	chr2	+	4723	27	novel_in_catalog	KDM3A	novel	709	4	NA	NA	-12	0	intron_retention	FALSE	canonical	1	24455	junction_8	146069.3837013392	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	1017	4127	15.0	-4	True	ATTAAA	-14
PB.6607.7	chr2	+	2645	17	incomplete-splice_match	KDM3A	ENST00000542128.5	4311	27	219	10187	-12	7004	3prime_fragment	FALSE	canonical	1	72822	junction_1	97400.46435526421	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	109	2643	55.0	-4	True	AAAACA	-19
PB.8362.5	chr3	-	4272	10	full-splice_match	ZNF148	ENST00000485866.5	2960	10	2	-1314	2	1045	multi-exon	FALSE	canonical	1	3795	junction_6	85677.45673551864	NA	1	NA	TRUE	NA	NA	NA	C	coding	794	2385	561	2945	20.0	-1	True	AATAAA	-19
PB.6607.2	chr2	+	2631	16	incomplete-splice_match	KDM3A	ENST00000542128.5	4311	27	199	11788	-32	5403	3prime_fragment	FALSE	canonical	1	72822	junction_1	99067.30243066522	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2502	129	2630	35.0	-24	True	NA	NA
PB.6607.3	chr2	+	4643	26	novel_not_in_catalog	KDM3A	novel	709	4	NA	NA	-31	0	intron_retention	FALSE	canonical	1	4783	junction_12	136877.3811190147	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	2152	4050	25.0	-23	True	ATTAAA	-11
PB.5791.1	chr19	+	2941	8	full-splice_match	SYDE1	ENST00000342784.6	3264	8	-27	350	-27	-336	multi-exon	FALSE	canonical	1	101773	junction_1	71763.8016471894	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	59	2266	55.0	-29	True	NA	NA
PB.5791.3	chr19	+	3075	8	full-splice_match	SYDE1	ENST00000600440.5	3058	8	-18	1	-16	-1	multi-exon	FALSE	canonical	1	8621	junction_1	95111.79210780955	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	48	2054	20.0	-18	True	AATAAA	-26
PB.5791.2	chr19	+	3288	8	full-splice_match	SYDE1	ENST00000342784.6	3264	8	-25	1	-25	-1	multi-exon	FALSE	canonical	1	101773	junction_1	71763.8016471894	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	57	2264	20.0	-27	True	AATAAA	-29
PB.6607.8	chr2	+	4664	26	full-splice_match	KDM3A	ENST00000312912.9	4886	26	223	-1	-8	1	multi-exon	FALSE	canonical	1	72822	junction_1	118702.55933730157	NA	0	NA	TRUE	NA	NA	NA	C	coding	1321	3966	105	4070	20.0	0	True	ATTAAA	-12
PB.6607.9	chr2	+	4258	26	full-splice_match	KDM3A	ENST00000312912.9	4886	26	223	405	-8	166	multi-exon	FALSE	canonical	1	72822	junction_1	118702.55933730157	NA	0	NA	TRUE	NA	NA	NA	C	coding	1321	3966	105	4070	40.0	0	True	AGTAAA	-25
PB.8048.1	chr3	-	2552	2	full-splice_match	POMGNT2	ENST00000344697.2	2544	2	-3	-5	-3	3	multi-exon	FALSE	canonical	1	107354	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	580	1743	350	2092	20.0	-5	True	ATTAAA	-18
PB.3733.3	chr15	-	4718	13	full-splice_match	UBE3A	ENST00000648336.1	5209	13	-28	519	-1	-513	multi-exon	FALSE	canonical	1	94074	junction_12	129007.52772574832	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	729	3347	30.0	41	False	AATAAA	-26
PB.3733.2	chr15	-	5245	13	full-splice_match	UBE3A	ENST00000648336.1	5209	13	-42	6	-10	0	multi-exon	FALSE	canonical	1	94074	junction_12	129007.52772574832	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	743	3361	30.0	27	False	AATAAA	-7
PB.3733.1	chr15	-	5005	11	full-splice_match	UBE3A	ENST00000649550.1	5025	11	24	-4	-1	4	multi-exon	TRUE	canonical	1	103543	junction_10	119234.17229473268	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	553	3111	15.0	-13	True	AATAAA	-17
PB.10231.10	chr6	-	4171	30	full-splice_match	MAP3K5	ENST00000359015.4	5197	30	443	583	443	-583	multi-exon	FALSE	canonical	1	58551	junction_27	63262.28494893905	NA	0	NA	TRUE	NA	NA	NA	C	coding	1219	3660	384	4043	80.0	1436	False	TTTAAA	-22
PB.3733.6	chr15	-	3540	14	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	-63	-2	no_combination_of_known_junctions	FALSE	canonical	1	3051	junction_13	156467.4221247947	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2616	924	3539	80.0	-26	True	NA	NA
PB.3733.5	chr15	-	4469	11	full-splice_match	UBE3A	ENST00000649550.1	5025	11	27	529	2	-523	multi-exon	FALSE	canonical	1	103543	junction_10	119234.17229473268	NA	2	1	TRUE	NA	NA	NA	C	coding	852	2559	550	3108	40.0	-10	True	AATAAA	-16
PB.3733.4	chr15	-	4485	10	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	1	-523	no_combination_of_known_junctions	FALSE	canonical	1	9424	junction_9	143654.58020156855	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	683	3124	40.0	38	False	AATAAA	-16
PB.262.12	chr1	+	2063	10	incomplete-splice_match	RBBP4	ENST00000458695.6	1674	12	6068	-611	5937	0	5prime_fragment	FALSE	canonical	1	117582	junction_5	143228.0720087139	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	236	1117	20.0	-4484	False	AATAAA	-15
PB.3733.9	chr15	-	3754	16	novel_not_in_catalog	UBE3A	novel	5726	3	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	231	junction_9	161001.62782564235	NA	3	NA	TRUE	NA	NA	NA	C	coding	673	2019	1735	3753	80.0	-28	True	NA	NA
PB.3733.8	chr15	-	5329	13	novel_in_catalog	UBE3A	novel	5726	3	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	94074	junction_12	134151.96178285094	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2556	2773	5328	80.0	-28	True	NA	NA
PB.5454.3	chr18	+	4779	22	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	-40	2	no_combination_of_known_junctions	FALSE	canonical	1	7196	junction_2	38468.34868391312	NA	5	NA	TRUE	NA	NA	NA	C	coding	1203	3612	641	4252	35.0	-5	True	AATAAA	-17
PB.671.1	chr1	-	4922	4	intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	9	1	FALSE	NA	NA	NA	A	coding	114	345	1662	2006	30.0	NA	False	AATAAA	-15
PB.671.2	chr1	-	2135	4	intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.3059.4	chr13	-	4921	30	novel_in_catalog	PARP4	novel	5474	34	NA	NA	64	-11	no_combination_of_known_junctions	FALSE	canonical	1	1026	junction_29	101176.96294164559	NA	2	NA	TRUE	NA	NA	NA	C	coding	1563	4692	48	4739	30.0	31	True	AATAAA	-10
PB.12040.2	chrX	+	1883	2	full-splice_match	ZNF674-AS1	ENST00000421685.2	2078	2	21	174	3	-174	multi-exon	FALSE	canonical	1	65443	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-5	True	AATAAA	-17
PB.12040.1	chrX	+	2136	2	full-splice_match	ZNF674-AS1	ENST00000421685.2	2078	2	18	-76	0	76	multi-exon	FALSE	canonical	1	65443	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-8	True	AATGAA	-28
PB.3059.1	chr13	-	5812	35	novel_not_in_catalog	PARP4	novel	5474	34	NA	NA	-15	-1	any annotated donor/acceptor	FALSE	canonical	1	6340	junction_33	116099.03601676298	NA	0	NA	TRUE	NA	NA	NA	C	coding	1724	5175	446	5620	10.0	-9	False	AATAAA	-20
PB.10097.3	chr6	+	2490	16	novel_not_in_catalog	ORC3	novel	2470	19	NA	NA	1	4546	any annotated donor/acceptor	FALSE	canonical	1	28163	junction_2	70526.46379697954	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	279	1778	80.0	-13	True	TATAAA	-38
PB.4306.6	chr16	+	2749	21	novel_in_catalog	POLR3E	novel	3655	20	NA	NA	-1	143	combination_of_known_junctions	FALSE	canonical	1	9432	junction_4	120867.16495826108	NA	3	NA	TRUE	NA	NA	NA	C	coding	652	1959	287	2245	10.0	-26	True	ATTAAA	-19
PB.4306.7	chr16	+	3037	21	full-splice_match	POLR3E	ENST00000299853.9	3697	21	0	660	0	2	multi-exon	FALSE	canonical	1	156259	junction_1	99866.33087552582	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	168	2294	30.0	-25	True	AATAAA	-19
PB.4396.3	chr16	+	2064	5	novel_not_in_catalog	ARMC5	novel	3626	8	NA	NA	413	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43865.02767581482	NA	1	NA	TRUE	NA	NA	NA	C	coding	587	1764	26	1789	10.0	-10	True	ATTAAA	-15
PB.4396.2	chr16	+	3216	5	incomplete-splice_match	ARMC5	ENST00000538189.5	3017	7	409	-8	409	6	intron_retention	FALSE	canonical	1	101406	junction_4	26401.93091896879	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	30	2030	0.0	-14	True	ATTAAA	-23
PB.4306.2	chr16	+	4459	21	novel_not_in_catalog	POLR3E	novel	3655	20	NA	NA	-7	-6	any annotated donor/acceptor	FALSE	canonical	1	13561	junction_18	121083.84773175776	NA	2	NA	TRUE	NA	NA	NA	C	coding	651	1956	175	2130	45.0	-32	True	AATAAA	-30
PB.4306.3	chr16	+	3695	21	full-splice_match	POLR3E	ENST00000299853.9	3697	21	-6	8	-6	-6	multi-exon	FALSE	canonical	1	156259	junction_1	99866.33087552582	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2127	174	2300	25.0	-31	True	AGTAAA	-14
PB.3290.5	chr14	+	1677	4	full-splice_match	APEX1	ENST00000555306.5	898	4	-12	-767	-1	2	multi-exon	FALSE	canonical	1	1492312	junction_1	717736.0797420981	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-12	True	AATAAA	-17
PB.4306.1	chr16	+	2901	22	novel_not_in_catalog	POLR3E	novel	3655	20	NA	NA	6	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_18	124198.39390990713	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	196	1722	20.0	-1068	False	AATAAA	-15
PB.5338.2	chr17	+	3473	15	novel_in_catalog	LRRC45	novel	2701	17	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	116779	junction_14	38725.39189693797	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	351	1793	10.0	-11	True	AATACA	-20
PB.5338.3	chr17	+	3118	16	novel_in_catalog	LRRC45	novel	2701	17	NA	NA	-7	1	intron_retention	FALSE	canonical	1	116779	junction_15	37743.941879753664	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	350	1792	5.0	-10	True	AATACA	-23
PB.5338.1	chr17	+	2717	17	full-splice_match	LRRC45	ENST00000306688.7	2701	17	-17	1	-17	-1	multi-exon	FALSE	canonical	1	116779	junction_16	36604.37750626411	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	360	2372	10.0	-20	True	AATACA	-21
PB.8919.2	chr4	-	2522	12	novel_in_catalog	PAPSS1	novel	296	2	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	4878	junction_11	217817.032067348	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	128	1939	25.0	106	False	AATAAA	-21
PB.4306.8	chr16	+	3104	20	novel_in_catalog	POLR3E	novel	3655	20	NA	NA	3	-4	intron_retention	FALSE	canonical	1	156259	junction_1	102451.58774463244	NA	1	1	TRUE	NA	NA	NA	C	coding	451	1356	163	1518	40.0	-20	True	AATAAA	-32
PB.4306.9	chr16	+	2798	21	full-splice_match	POLR3E	ENST00000299853.9	3697	21	8	891	-3	151	multi-exon	FALSE	canonical	1	156259	junction_1	99866.33087552582	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	160	2286	15.0	-17	True	ATTAAA	-27
PB.5108.4	chr17	-	2376	5	novel_not_in_catalog	MRPL27	novel	732	4	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	2041	junction_4	681863.2993470905	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	1697	2152	25.0	4	True	AATAAA	-37
PB.5108.1	chr17	-	2431	3	full-splice_match	MRPL27	ENST00000442592.3	2441	3	12	-2	1	-1	multi-exon	FALSE	canonical	1	1157230	junction_2	191120.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-12	True	AATAAA	-39
PB.5108.3	chr17	-	2773	2	full-splice_match	MRPL27	ENST00000514928.1	397	2	-9	-2367	-9	0	multi-exon	FALSE	canonical	1	1157230	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-37
PB.1809.4	chr11	+	4263	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	30	1898	0	-1898	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1038	3117	113	3229	20.0	0	True	ATTAAA	-20
PB.1133.1	chr1	+	2764	3	incomplete-splice_match	MARK1	ENST00000366917.5	2946	18	-410	79561	-36	3389	3prime_fragment	FALSE	canonical	1	46996	junction_1	2184.5	NA	4	NA	TRUE	NA	NA	NA	A	coding	106	321	677	997	20.0	11	True	AATAAA	-21
PB.11495.17	chr9	-	4170	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-73	1	-73	-1	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	978	2937	392	3328	20.0	-41	True	AATAAA	-20
PB.8662.5	chr4	+	7574	22	full-splice_match	NSD2	ENST00000508803.5	4251	22	-31	-3292	-31	0	multi-exon	FALSE	canonical	1	155384	junction_1	139155.45407055653	NA	0	NA	TRUE	NA	NA	NA	C	coding	1365	4098	180	4277	20.0	0	True	ATTAAA	-29
PB.3723.1	chr15	+	6568	5	full-splice_match	NIPA1	ENST00000337435.8	6567	5	-5	4	-5	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	329	990	31	1020	20.0	-21	True	AATAAA	-19
PB.3723.2	chr15	+	6622	6	full-splice_match	NIPA1	ENST00000557930.1	582	6	-169	-5871	12	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	352	1074	20.0	-4	True	AATAAA	-19
PB.3723.3	chr15	+	2230	5	full-splice_match	NIPA1	ENST00000337435.8	6567	5	15	4322	15	-607	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	11	1000	25.0	-1	True	ATTAAA	-20
PB.8626.15	chr3	+	2095	8	novel_in_catalog	PIGX	novel	744	6	NA	NA	19	604	combination_of_known_junctions	FALSE	canonical	1	15249	junction_6	77487.49464347425	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	598	1104	50.0	0	True	AATAAA	-11
PB.7501.10	chr21	+	2396	11	novel_in_catalog	SON	novel	8813	12	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	5609	junction_2	348947.8431471385	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	33	1496	25.0	-12	True	AATACA	-13
PB.8626.16	chr3	+	2129	6	novel_in_catalog	PIGX	novel	744	6	NA	NA	-19	604	combination_of_known_junctions	FALSE	canonical	1	23309	junction_1	91569.00675534272	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	485	1138	50.0	241	False	AATAAA	-11
PB.8626.11	chr3	+	1631	6	full-splice_match	PIGX	ENST00000639474.1	777	6	-188	-666	-13	279	multi-exon	FALSE	canonical	1	91628	junction_1	66604.62424366645	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	312	965	80.0	-32	True	NA	NA
PB.8626.10	chr3	+	3117	7	full-splice_match	PIGX	ENST00000296333.9	953	7	-66	-2098	-13	-7	multi-exon	FALSE	canonical	1	15249	junction_5	99991.12202424106	NA	10	2	TRUE	NA	NA	NA	C	coding	235	708	312	1019	50.0	-32	True	AATAAA	-11
PB.8626.13	chr3	+	2007	7	full-splice_match	PIGX	ENST00000296333.9	953	7	-63	-991	-10	604	multi-exon	FALSE	canonical	1	15249	junction_5	99991.12202424106	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	309	1016	50.0	-29	True	AATAAA	-11
PB.7501.11	chr21	+	6542	6	incomplete-splice_match	SON	ENST00000300278.8	7477	7	-1	1037	-1	574	3prime_fragment	FALSE	canonical	1	311540	junction_4	410122.6507817387	NA	4	NA	TRUE	NA	NA	NA	C	coding	2170	6510	31	6540	45.0	-10	True	AAAAAG	-13
PB.9527.1	chr5	-	2062	14	novel_in_catalog	HDAC3	novel	1952	13	NA	NA	-3	0	intron_retention	FALSE	canonical	1	337964	junction_12	270853.7083879687	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	745	1470	25.0	2	True	AATAAA	-26
PB.9527.2	chr5	-	1940	15	full-splice_match	HDAC3	ENST00000305264.7	1959	15	18	1	-9	-1	multi-exon	FALSE	canonical	1	337964	junction_13	269724.8392721228	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	63	1349	20.0	-4	True	AATAAA	-25
PB.9527.3	chr5	-	1623	14	incomplete-splice_match	HDAC3	ENST00000305264.7	1959	15	17	3989	-10	-3	3prime_fragment	FALSE	canonical	1	337964	junction_12	276971.94110969256	NA	2	NA	TRUE	NA	NA	NA	C	coding	434	1305	64	1368	15.0	-5	True	NA	NA
PB.9527.4	chr5	-	2592	2	full-splice_match	HDAC3	ENST00000492506.1	830	2	-10	-1752	-10	1752	multi-exon	FALSE	canonical	1	443034	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	456	827	85.0	-5	True	NA	NA
PB.9834.1	chr6	-	1858	1	full-splice_match	HCG4	ENST00000418983.1	998	1	-139	-721	-139	721	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-361	False	ATTAAA	-28
PB.8292.29	chr3	-	1439	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	51	1846	0	409	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	135	671	20.0	-9	True	NA	NA
PB.8292.28	chr3	-	8213	3	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	-12	566	intron_retention	FALSE	canonical	1	238169	junction_2	19867.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	112	339	6950	7288	35.0	-1	True	AATAAA	-24
PB.405.1	chr1	-	2346	7	full-splice_match	TXNDC12	ENST00000371626.8	2396	7	-8	58	-8	-58	multi-exon	TRUE	canonical	1	673362	junction_5	125150.21281699401	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	1084	1602	75.0	-4	True	NA	NA
PB.157.12	chr1	-	4611	10	novel_in_catalog	HNRNPR	novel	646	5	NA	NA	-20	-4	intron_retention	FALSE	canonical	1	118260	junction_7	567774.6316715836	NA	7	NA	TRUE	NA	NA	NA	C	coding	324	975	2975	3949	50.0	3	True	AATAAA	-17
PB.8292.23	chr3	-	4007	5	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	3	581	intron_retention	FALSE	canonical	1	196010	junction_4	29487.366642343633	NA	3	NA	TRUE	NA	NA	NA	C	coding	112	339	2729	3067	25.0	19	False	AATAAA	-39
PB.8292.22	chr3	-	1971	6	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	181	582	combination_of_known_junctions	FALSE	canonical	1	3743	junction_5	114368.40288646161	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	692	1030	25.0	301	False	AATAAA	-40
PB.8292.21	chr3	-	1718	5	full-splice_match	GCSAM	ENST00000495418.5	871	5	-54	-793	5	584	multi-exon	FALSE	canonical	1	9587	junction_1	100065.58480941386	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	462	803	20.0	25	True	AATAAA	-42
PB.8292.20	chr3	-	4225	5	incomplete-splice_match	GCSAM	ENST00000484193.5	1036	6	-33	-584	-17	584	intron_retention	FALSE	canonical	1	181684	junction_4	34368.343548242185	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	2761	3282	20.0	-1	True	AATAAA	-42
PB.1809.6	chr11	+	5879	25	full-splice_match	IPO7	ENST00000379719.7	6191	25	30	282	0	-282	multi-exon	FALSE	canonical	1	59990	junction_10	273072.15907577536	NA	4	1	TRUE	NA	NA	NA	C	coding	1038	3117	113	3229	35.0	0	True	AATAAA	-16
PB.8292.26	chr3	-	1568	5	novel_in_catalog	GCSAM	novel	3336	6	NA	NA	0	567	combination_of_known_junctions	FALSE	canonical	1	9587	junction_1	87247.42612392643	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	329	670	30.0	-9	True	AATAAA	-25
PB.5454.7	chr18	+	4118	10	incomplete-splice_match	FHOD3	ENST00000589114.5	4154	14	-15	82932	-12	-82932	3prime_fragment	FALSE	canonical	1	46184	junction_1	18103.078666621226	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	135	1334	20.0	-11	True	AATAAA	-17
PB.8292.24	chr3	-	1875	7	full-splice_match	GCSAM	ENST00000487901.1	809	7	14	-1080	-2	569	multi-exon	FALSE	canonical	1	17469	junction_6	103306.5007109373	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	462	947	30.0	-11	True	AATAAA	-27
PB.8904.29	chr4	-	1421	8	novel_not_in_catalog	UBE2D3	novel	3990	8	NA	NA	-52	-454	any annotated donor/acceptor	FALSE	canonical	1	8555	junction_7	443533.9951795794	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	151	594	25.0	1009	False	AATAAA	-17
PB.4467.14	chr16	-	8541	50	novel_not_in_catalog	CNOT1	novel	8471	49	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	3019	junction_3	310794.90708734706	NA	5	NA	TRUE	NA	NA	NA	C	coding	2345	7038	304	7341	20.0	-31	False	ATTAAA	-13
PB.11190.1	chr8	+	2598	6	full-splice_match	GDAP1	ENST00000220822.11	3666	6	21	1047	-15	-1047	multi-exon	FALSE	canonical	1	127699	junction_1	20241.221755615446	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	60	1136	35.0	-43	True	AATAAA	-26
PB.11655.1	chr9	-	2621	3	novel_in_catalog	NINJ1	novel	1281	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	292023	junction_2	231026.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	72	590	10.0	1997	False	AATAAA	-25
PB.8662.7	chr4	+	7366	20	novel_in_catalog	NSD2	novel	4251	22	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	1	41960	junction_7	164185.8956963484	NA	1	NA	TRUE	NA	NA	NA	C	coding	1296	3891	180	4070	20.0	0	True	ATTAAA	-28
PB.8904.21	chr4	-	2196	8	full-splice_match	UBE2D3	ENST00000338145.7	896	8	-20	-1280	1	4	multi-exon	TRUE	canonical	1	24784	junction_7	440839.6085048323	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	310	753	20.0	-1	True	AATAAA	-21
PB.8904.20	chr4	-	2424	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	-30	1596	-7	-3	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	545	988	15.0	-80	True	AATAAA	-14
PB.8904.23	chr4	-	2231	9	novel_in_catalog	UBE2D3	novel	3990	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	40609	junction_5	551267.0026341592	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	AATAAA	-20
PB.8904.25	chr4	-	2122	8	full-splice_match	UBE2D3	ENST00000394801.8	2368	8	95	151	-4	7	multi-exon	FALSE	canonical	1	151175	junction_6	393001.72078711394	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	391	834	25.0	-91	True	AATAAA	-26
PB.8904.27	chr4	-	1982	8	full-splice_match	UBE2D3	ENST00000394803.9	2227	8	93	152	-2	6	multi-exon	FALSE	canonical	1	151175	junction_6	406515.0073236998	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	252	695	20.0	-5	True	AATAAA	-25
PB.8904.26	chr4	-	1967	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	279	1744	-11	7	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	236	679	25.0	-12	True	AATAAA	-26
PB.5187.54	chr17	-	2368	13	novel_not_in_catalog	DDX5	novel	2225	12	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1906780.6028441614	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	171	1454	40.0	-1	True	AATAAA	-44
PB.5187.55	chr17	-	4082	9	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5032484	junction_8	710788.2169621624	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	174	1277	40.0	-4	True	AATAAA	-43
PB.5187.56	chr17	-	4141	10	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5032484	junction_9	637399.6597471462	NA	8	2	TRUE	NA	NA	NA	C	coding	328	987	171	1157	40.0	-1	True	AATAAA	-43
PB.5187.57	chr17	-	3376	13	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	11399	junction_2	1903855.7639645978	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	171	1391	40.0	-1	True	AATAAA	-43
PB.5187.50	chr17	-	3268	13	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	103462	junction_2	1880260.292303042	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	171	1391	40.0	-1	True	AATAAA	-44
PB.6796.2	chr2	-	1680	11	full-splice_match	WDSUB1	ENST00000359774.8	1912	11	71	161	-25	-120	multi-exon	FALSE	canonical	1	54404	junction_10	41386.90906748172	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	171	1601	70.0	8	False	NA	NA
PB.5187.52	chr17	-	2611	15	novel_in_catalog	DDX5	novel	2225	12	NA	NA	-87	-1	no_combination_of_known_junctions	FALSE	canonical	1	39968	junction_3	2678754.1626240737	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	380	1630	40.0	-88	False	AATAAA	-44
PB.5187.53	chr17	-	2409	14	novel_in_catalog	DDX5	novel	2225	12	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	5399	junction_13	1917471.9177029387	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	265	2109	40.0	0	True	AATAAA	-44
PB.2554.3	chr12	-	3597	7	novel_in_catalog	PUS7L	novel	13593	9	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	2890	junction_2	51197.63428589471	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	90	1832	40.0	-15	True	AATAAA	-16
PB.2554.2	chr12	-	3945	9	full-splice_match	PUS7L	ENST00000344862.9	13593	9	31	9617	7	-3	multi-exon	FALSE	canonical	1	48688	junction_8	27333.896516047615	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	74	2179	35.0	-28	True	AATAAA	-17
PB.2554.1	chr12	-	4369	9	full-splice_match	PUS7L	ENST00000416848.6	4364	9	-1	-4	0	4	multi-exon	FALSE	canonical	1	16845	junction_8	36222.74107497078	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	491	2596	30.0	-1	True	AATAAA	-24
PB.1770.4	chr11	-	6847	34	novel_not_in_catalog	NUP98	novel	580	3	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	1112	junction_33	135024.5183319429	NA	0	NA	TRUE	NA	NA	NA	C	coding	1800	5403	300	5702	5.0	1	True	AATAAA	-22
PB.2554.5	chr12	-	3271	2	incomplete-splice_match	PUS7L	ENST00000551923.5	3313	9	-17	22823	3	2786	3prime_fragment	FALSE	canonical	1	24748	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	C	coding	326	981	107	1087	60.0	-32	True	NA	NA
PB.2554.4	chr12	-	2991	8	full-splice_match	PUS7L	ENST00000431332.7	1873	8	34	-1152	0	-4	multi-exon	FALSE	canonical	1	2205	junction_7	43374.74452786025	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	60	1226	40.0	-1	True	AATAAA	-16
PB.11914.8	chr9	-	2116	10	novel_not_in_catalog	FBXW5	novel	1932	5	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	1	45	junction_1	413183.17073677963	NA	2	1	TRUE	NA	NA	NA	C	coding	566	1701	62	1762	15.0	26	True	AATAAA	-15
PB.8662.6	chr4	+	5016	22	novel_not_in_catalog	NSD2	novel	4251	22	NA	NA	-31	-1	any annotated donor/acceptor	FALSE	canonical	1	8473	junction_16	165874.37171562828	NA	9	NA	TRUE	NA	NA	NA	C	coding	1316	3951	180	4130	25.0	0	True	AATATA	-27
PB.9286.1	chr5	+	2976	10	full-splice_match	PTCD2	ENST00000380639.9	11151	10	-11	8186	-11	-16	multi-exon	FALSE	canonical	1	45765	junction_8	18347.96948499267	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	28	1194	80.0	-17	False	NA	NA
PB.7279.3	chr20	+	2056	18	novel_in_catalog	RPN2	novel	791	6	NA	NA	-2	-19	combination_of_known_junctions	FALSE	canonical	1	137257	junction_17	1075572.2396094997	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	30	1973	65.0	-2	True	AAGAAA	-40
PB.11914.2	chr9	-	2546	9	novel_in_catalog	FBXW5	novel	1932	5	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	24727	junction_3	431823.4029597451	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	63	1196	15.0	25	True	AATAAA	-15
PB.11914.3	chr9	-	2433	7	novel_in_catalog	FBXW5	novel	1932	5	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	420815	junction_6	300608.83413134346	NA	2	NA	TRUE	NA	NA	NA	C	coding	314	945	997	1941	15.0	0	True	AATAAA	-15
PB.11914.4	chr9	-	2375	8	novel_not_in_catalog	FBXW5	novel	1932	5	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	18988	junction_2	451397.9247609924	NA	1	1	TRUE	NA	NA	NA	C	coding	261	786	89	874	15.0	-1	True	AATAAA	-15
PB.9286.2	chr5	+	2052	10	full-splice_match	PTCD2	ENST00000380639.9	11151	10	8	9091	-1	-48	multi-exon	FALSE	canonical	1	45765	junction_8	18347.96948499267	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	24	1175	30.0	2	True	ATTAAA	-26
PB.11914.6	chr9	-	2302	8	novel_in_catalog	FBXW5	novel	1932	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	69166	junction_3	438165.2962093234	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	920	1810	15.0	4	True	AATAAA	-15
PB.11914.7	chr9	-	2230	9	novel_in_catalog	FBXW5	novel	1932	5	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	69166	junction_3	420576.5885554467	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	92	1738	15.0	-4	True	AATAAA	-15
PB.11881.3	chr9	-	4016	5	novel_in_catalog	SURF4	novel	2984	6	NA	NA	-24	-15	intron_retention	FALSE	canonical	1	1350008	junction_4	340081.0655434782	NA	2	NA	TRUE	NA	NA	NA	C	coding	194	585	99	683	25.0	-8	True	AATAAA	-17
PB.9774.14	chr6	+	5654	6	novel_in_catalog	E2F3	novel	4094	5	NA	NA	37	0	intron_retention	FALSE	canonical	1	43990	junction_1	50881.991737745484	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	1696	2370	10.0	-7	True	AATAAA	-45
PB.9774.15	chr6	+	4369	7	novel_not_in_catalog	E2F3	novel	4094	5	NA	NA	144	0	any annotated donor/acceptor	FALSE	canonical	1	1061	junction_1	57374.89050025862	NA	2	1	TRUE	NA	NA	NA	C	coding	224	675	411	1085	10.0	-13	False	AATAAA	-45
PB.9774.10	chr6	+	4176	7	full-splice_match	E2F3	ENST00000535432.2	4425	7	93	156	93	-156	multi-exon	FALSE	canonical	1	9370	junction_2	58424.15663252849	NA	9	1	TRUE	NA	NA	NA	C	coding	334	1005	44	1048	85.0	0	True	NA	NA
PB.9774.11	chr6	+	4391	7	novel_not_in_catalog	E2F3	novel	4094	5	NA	NA	-29	-157	any annotated donor/acceptor	FALSE	canonical	1	202	junction_1	57606.515388645246	NA	5	NA	TRUE	NA	NA	NA	C	coding	224	675	590	1264	85.0	32	True	NA	NA
PB.9774.12	chr6	+	3723	2	novel_in_catalog	E2F3	novel	4094	5	NA	NA	-29	-7	no_combination_of_known_junctions	FALSE	canonical	1	530	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	72	219	228	446	25.0	32	True	AATAAA	-38
PB.9774.13	chr6	+	2844	7	full-splice_match	E2F3	ENST00000535432.2	4425	7	16	1565	16	-1565	multi-exon	FALSE	canonical	1	9370	junction_2	58424.15663252849	NA	3	1	TRUE	NA	NA	NA	C	coding	334	1005	121	1125	85.0	-28	True	NA	NA
PB.3218.40	chr13	-	4146	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-13	931	0	-931	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	428	1987	50.0	-1	True	AATAAA	-20
PB.3218.41	chr13	-	4366	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-840	no_combination_of_known_junctions	FALSE	canonical	1	3411	junction_4	116174.86256480194	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	428	2116	30.0	-1	True	AATAAA	-17
PB.3218.42	chr13	-	4126	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	171	-840	no_combination_of_known_junctions	FALSE	canonical	1	8119	junction_2	105381.98686652999	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	244	1515	30.0	-3	True	AATAAA	-17
PB.3218.43	chr13	-	4058	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	-1	-840	no_combination_of_known_junctions	FALSE	canonical	1	8531	junction_3	91073.43258678069	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	429	1808	30.0	-2	True	AATAAA	-17
PB.3218.44	chr13	-	2761	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	-840	any annotated donor/acceptor	FALSE	canonical	1	677	junction_1	90620.98741056239	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	428	1828	30.0	-1	True	AATAAA	-17
PB.4432.1	chr16	-	4397	25	full-splice_match	RPGRIP1L	ENST00000262135.9	7725	25	30	3298	0	330	multi-exon	TRUE	canonical	1	27296	junction_4	14540.093694295403	NA	0	NA	TRUE	NA	NA	NA	C	coding	1235	3708	65	3772	30.0	-13	True	ATTAAA	-29
PB.3218.46	chr13	-	3777	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-14	1301	-1	-1301	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	2	NA	TRUE	NA	NA	NA	C	coding	519	1560	429	1988	40.0	-2	True	ATTAAA	-23
PB.3218.47	chr13	-	3102	8	full-splice_match	DCT	ENST00000377028.9	5064	8	615	1347	615	1332	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	733	1359	65.0	8	True	TTTAAA	-11
PB.3218.48	chr13	-	3858	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	1	1332	no_combination_of_known_junctions	FALSE	canonical	1	3411	junction_4	116174.86256480194	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	427	2115	65.0	0	True	TTTAAA	-11
PB.3218.49	chr13	-	3667	8	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	1332	no_combination_of_known_junctions	FALSE	canonical	1	12	junction_3	113203.02782638468	NA	2	NA	TRUE	NA	NA	NA	C	coding	498	1497	428	1924	65.0	-1	True	TTTAAA	-11
PB.10235.15	chr6	+	3921	9	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	-157	intron_retention	FALSE	canonical	1	18466	junction_1	236593.92678988905	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	277	2649	20.0	-1	True	AATAAA	-23
PB.7807.6	chr22	-	2892	12	full-splice_match	ST13	ENST00000216218.7	3595	12	399	304	-7	-304	multi-exon	FALSE	canonical	1	1699	junction_8	167820.38624903964	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	84	1193	25.0	5453	False	CATAAA	-13
PB.10235.13	chr6	+	5317	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	38	-6	intron_retention	FALSE	canonical	1	73954	junction_1	225926.8672503362	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	1478	3331	35.0	-7	True	AATAAA	-43
PB.10235.12	chr6	+	5714	1	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	44	1449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	110	333	3971	4303	80.0	-1	True	AAGAAA	-23
PB.10235.11	chr6	+	4200	9	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	38	116	intron_retention	FALSE	canonical	1	18466	junction_1	236593.92678988905	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	283	2655	70.0	-7	True	NA	NA
PB.10235.10	chr6	+	4516	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	38	-7	intron_retention	FALSE	canonical	1	330	junction_3	300604.6278395105	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	1050	2531	35.0	-7	True	AATAAA	-42
PB.9398.7	chr5	-	1763	9	novel_in_catalog	PGGT1B	novel	9545	9	NA	NA	5	616	combination_of_known_junctions	FALSE	canonical	1	25151	junction_7	58630.57712371059	NA	1	1	TRUE	NA	NA	NA	C	coding	254	765	383	1147	45.0	-2	True	AATAAA	-28
PB.11881.5	chr9	-	2816	6	full-splice_match	SURF4	ENST00000371989.7	2984	6	151	17	43	-16	multi-exon	FALSE	canonical	1	1350008	junction_5	313106.1478080557	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	109	789	25.0	176	False	AATAAA	-16
PB.2850.2	chr12	+	3995	15	full-splice_match	HCFC2	ENST00000229330.8	5734	15	73	1666	-12	1392	multi-exon	FALSE	canonical	1	80242	junction_1	20177.847895119325	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	32	2410	15.0	-10	True	AATAAA	-24
PB.2850.3	chr12	+	2676	16	novel_in_catalog	HCFC2	novel	5734	15	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	6925	junction_12	40764.53151595828	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	28	1785	40.0	-6	True	AATAAA	-24
PB.2850.1	chr12	+	5658	15	full-splice_match	HCFC2	ENST00000229330.8	5734	15	70	6	-15	-6	multi-exon	FALSE	canonical	1	80242	junction_1	20177.847895119325	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	35	2413	40.0	-13	True	AATAAA	-17
PB.2850.6	chr12	+	4470	14	novel_in_catalog	HCFC2	novel	5734	15	NA	NA	-4	25	intron_retention	FALSE	canonical	1	80242	junction_1	20888.704430694102	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	24	1775	75.0	-2	True	NA	NA
PB.2850.7	chr12	+	4391	16	novel_not_in_catalog	HCFC2	novel	5734	15	NA	NA	0	-1302	any annotated donor/acceptor	FALSE	canonical	1	2018	junction_12	41540.292614600905	NA	3	NA	TRUE	NA	NA	NA	C	coding	588	1767	20	1786	40.0	2	True	TATAAA	-25
PB.2850.4	chr12	+	2594	15	full-splice_match	HCFC2	ENST00000229330.8	5734	15	77	3063	-8	-5	multi-exon	FALSE	canonical	1	80242	junction_1	20177.847895119325	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	28	2406	40.0	-6	True	AATAAA	-23
PB.2850.5	chr12	+	2396	14	novel_in_catalog	HCFC2	novel	5734	15	NA	NA	-7	25	no_combination_of_known_junctions	FALSE	canonical	1	4112	junction_7	35169.03486098609	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	27	2237	75.0	-5	True	NA	NA
PB.7524.19	chr21	-	3465	6	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	-4	80	intron_retention	FALSE	canonical	1	203969	junction_3	291081.59892483754	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	2726	3232	15.0	16	True	NA	NA
PB.819.6	chr1	+	3323	3	novel_in_catalog	SLC25A44	novel	3662	4	NA	NA	27	-3	combination_of_known_junctions	FALSE	canonical	1	5966	junction_2	90119.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	146	775	5.0	-1	True	ATTAAA	-17
PB.7524.11	chr21	-	1361	7	full-splice_match	HMGN1	ENST00000288344.14	1303	7	-67	9	-4	-9	multi-exon	FALSE	canonical	1	52165	junction_3	311219.49788448703	NA	6	1	TRUE	NA	NA	NA	C	coding	8	27	335	361	45.0	0	True	AATAAA	-10
PB.7524.10	chr21	-	2890	7	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	-5	-6	intron_retention	FALSE	canonical	1	102087	junction_3	301951.99043138005	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	3	371	45.0	-1	True	AATAAA	-13
PB.7524.13	chr21	-	4250	5	full-splice_match	HMGN1	ENST00000486741.5	4299	5	40	9	-5	-9	multi-exon	FALSE	canonical	1	203969	junction_2	322968.5555726556	NA	1	NA	TRUE	NA	NA	NA	C	coding	68	207	143	349	45.0	-1	True	AATAAA	-10
PB.1770.9	chr11	-	6794	34	novel_not_in_catalog	NUP98	novel	580	3	NA	NA	-4	-40	any annotated donor/acceptor	FALSE	canonical	1	4188	junction_32	134672.7672860789	NA	13	1	TRUE	NA	NA	NA	C	coding	1800	5403	304	5706	15.0	-3	True	ATTAAA	-38
PB.7524.17	chr21	-	3700	6	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	3	-9	intron_retention	FALSE	canonical	1	203969	junction_3	291081.59892483754	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	2719	3225	45.0	-6	True	AATAAA	-10
PB.7524.16	chr21	-	3792	5	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	4	-9	intron_retention	FALSE	canonical	1	203969	junction_3	291377.0960974584	NA	7	NA	TRUE	NA	NA	NA	C	coding	168	507	2811	3317	45.0	-5	True	AATAAA	-10
PB.4066.26	chr15	+	4179	39	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	2715	junction_1	140846.45193953722	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	171	4157	10.0	40	True	AATAAA	-22
PB.11861.2	chr9	+	11189	31	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	-43	-11	intron_retention	TRUE	canonical	1	158940	junction_1	158365.01181868845	NA	15	NA	TRUE	NA	NA	NA	C	coding	2171	6516	270	6785	55.0	-3536	False	AATAAA	-9
PB.11861.5	chr9	+	9279	32	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	-29	-1960	combination_of_known_junctions	FALSE	canonical	1	158940	junction_1	155266.12968887968	NA	0	NA	TRUE	NA	NA	NA	C	coding	2228	6687	256	6942	85.0	-42	True	NA	NA
PB.11861.4	chr9	+	9136	33	novel_not_in_catalog	PRRC2B	novel	266	2	NA	NA	-33	-2014	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_32	209812.41098582227	NA	2	NA	TRUE	NA	NA	NA	C	coding	2229	6690	256	6945	10.0	-46	True	AATAAA	-19
PB.11861.7	chr9	+	9150	31	novel_not_in_catalog	PRRC2B	novel	266	2	NA	NA	-32	-2009	any annotated donor/acceptor	FALSE	canonical	1	30413	junction_1	170405.17406066507	NA	6	NA	TRUE	NA	NA	NA	C	coding	2171	6516	255	6770	10.0	-45	True	AATAAA	-24
PB.11861.6	chr9	+	11274	32	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	-32	3	intron_retention	FALSE	canonical	1	158940	junction_1	156252.54722955145	NA	11	2	TRUE	NA	NA	NA	C	coding	2229	6690	259	6948	15.0	-45	True	AATAAA	-23
PB.11861.9	chr9	+	2447	15	incomplete-splice_match	PRRC2B	ENST00000405995.5	9157	31	-30	26606	-30	-1256	3prime_fragment	FALSE	canonical	1	158940	junction_1	136304.35868867367	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2190	257	2446	50.0	-43	True	NA	NA
PB.11861.8	chr9	+	2756	16	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	-30	-218	combination_of_known_junctions	FALSE	canonical	1	158940	junction_1	135690.25023135924	NA	2	1	TRUE	NA	NA	NA	C	coding	833	2499	257	2755	45.0	-43	True	NA	NA
PB.8511.10	chr3	+	4070	9	full-splice_match	SEC62	ENST00000480708.5	1430	9	-9	-2631	-2	-1911	multi-exon	FALSE	canonical	1	48605	junction_8	459048.30316480243	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	25	1224	35.0	-12	True	NA	NA
PB.7381.23	chr20	+	3693	9	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-1	-861	any annotated donor/acceptor	FALSE	canonical	1	347	junction_1	293167.7221288769	NA	3	NA	TRUE	NA	NA	NA	C	coding	272	819	527	1345	90.0	-31	True	NA	NA
PB.7381.22	chr20	+	3857	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	-3	-861	intron_retention	FALSE	canonical	1	226732	junction_3	246964.21715616123	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	758	1093	90.0	-33	True	NA	NA
PB.7381.21	chr20	+	2512	8	novel_in_catalog	STX16	novel	4318	9	NA	NA	-5	632	intron_retention	FALSE	canonical	1	12050	junction_2	216533.99731794957	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	993	1685	25.0	-35	True	ATTAAA	-28
PB.7381.20	chr20	+	2986	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	-5	1229	intron_retention	FALSE	canonical	1	59797	junction_1	293377.77896009025	NA	1	1	TRUE	NA	NA	NA	C	coding	128	387	760	1146	40.0	-35	True	ATTAAA	-25
PB.7381.27	chr20	+	2486	8	full-splice_match	STX16	ENST00000371132.8	4552	8	-348	2414	4	626	multi-exon	FALSE	canonical	1	273641	junction_1	207679.19878298562	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	751	1665	40.0	-26	True	ATTAAA	-22
PB.7381.26	chr20	+	8191	1	novel_in_catalog	STX16	novel	4318	9	NA	NA	4	-9971	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	125	378	2	379	70.0	-26	True	AATAAA	-32
PB.7381.25	chr20	+	3483	8	full-splice_match	STX16	ENST00000371132.8	4552	8	24	1045	24	-1019	multi-exon	FALSE	canonical	1	273641	junction_1	207679.19878298562	NA	3	NA	TRUE	NA	NA	NA	C	coding	304	915	379	1293	65.0	-9112	False	NA	NA
PB.7381.24	chr20	+	3148	8	full-splice_match	STX16	ENST00000358029.8	4329	8	-627	1808	-1	1232	multi-exon	FALSE	canonical	1	59797	junction_1	255480.67011052414	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	756	1721	30.0	-31	True	ATTAAA	-28
PB.12221.2	chrX	-	2984	6	full-splice_match	AMMECR1	ENST00000262844.9	5504	6	282	2238	127	-14	multi-exon	FALSE	canonical	1	91913	junction_3	7723.728193042529	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	256	888	90.0	3311	False	NA	NA
PB.12221.3	chrX	-	3004	5	full-splice_match	AMMECR1	ENST00000372059.6	3052	5	-4	52	-4	-14	multi-exon	FALSE	canonical	1	8375	junction_4	40771.05795168921	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	18	908	90.0	-5	True	NA	NA
PB.7381.29	chr20	+	3466	7	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	8	-861	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	308797.7011965115	NA	10	2	TRUE	NA	NA	NA	C	coding	124	375	1	375	90.0	-22	True	NA	NA
PB.12221.1	chrX	-	5349	6	full-splice_match	AMMECR1	ENST00000262844.9	5504	6	154	1	-1	-1	multi-exon	FALSE	canonical	1	91913	junction_3	7723.728193042529	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	15	1016	20.0	-2	True	AATAAA	-13
PB.933.7	chr1	+	2270	8	full-splice_match	METTL13	ENST00000362019.7	3022	8	-8	760	-8	54	multi-exon	FALSE	canonical	1	30765	junction_1	125352.89587026389	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	228	2069	10.0	0	True	AATAAA	-29
PB.12221.4	chrX	-	2914	4	novel_in_catalog	AMMECR1	novel	5504	6	NA	NA	-9	-14	no_combination_of_known_junctions	FALSE	canonical	1	217	junction_2	51322.005444924784	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	23	673	90.0	-10	True	NA	NA
PB.4841.1	chr17	-	1403	4	full-splice_match	LYRM9	ENST00000379102.7	501	4	32	-934	8	-2	multi-exon	FALSE	canonical	1	32154	junction_3	33483.95211971782	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	11	True	AGTAAA	-16
PB.8334.10	chr3	-	3635	13	incomplete-splice_match	GOLGB1	ENST00000393667.7	11198	22	-1	33797	-1	27	3prime_fragment	FALSE	canonical	1	69359	junction_7	55414.4661798704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1174	3522	113	3634	60.0	-1	True	AAGAAA	-16
PB.11152.35	chr8	-	2850	14	full-splice_match	ASPH	ENST00000356457.9	3730	14	31	849	3	-20	multi-exon	FALSE	canonical	1	1265348	junction_13	406930.56471317925	NA	31	1	TRUE	NA	NA	NA	C	coding	313	942	195	1136	60.0	26	True	ATTAAA	-11
PB.933.6	chr1	+	4550	7	incomplete-splice_match	METTL13	ENST00000361735.3	3327	8	-28	759	-8	55	intron_retention	FALSE	canonical	1	238718	junction_2	59685.17603410601	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	295	2166	10.0	0	True	AATAAA	-30
PB.9341.10	chr5	-	2141	3	full-splice_match	LYSMD3	ENST00000315948.10	4259	3	-12	2130	-9	535	multi-exon	FALSE	canonical	1	117527	junction_2	18753.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	158	1078	50.0	-10	True	AAGAAA	-15
PB.9341.11	chr5	-	2156	1	novel_in_catalog	LYSMD3	novel	1538	3	NA	NA	0	-7996	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.11569.2	chr9	+	1705	4	novel_not_in_catalog	FGF7P6	novel	1890	3	NA	NA	-4	57	any annotated donor/acceptor	FALSE	canonical	1	18	junction_2	1641.407796848655	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.11569.3	chr9	+	1582	3	full-splice_match	FGF7P6	ENST00000377614.7	1890	3	365	-57	9	57	multi-exon	FALSE	canonical	1	112	junction_2	4.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.12360.2	chrX	-	3642	11	novel_in_catalog	MPP1	novel	2042	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	458914	junction_10	100444.91903107891	NA	3	NA	TRUE	NA	NA	NA	C	coding	317	954	127	1080	25.0	141	False	AATAAA	-20
PB.926.2	chr1	-	2948	13	novel_not_in_catalog	SCYL3	novel	6364	13	NA	NA	279	-6	any annotated donor/acceptor	FALSE	canonical	1	5118	junction_12	31622.687288625024	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	249	2315	35.0	222	False	AATAAA	-26
PB.3614.1	chr14	-	2563	15	incomplete-splice_match	TTC7B	ENST00000328459.10	19458	20	120889	16025	-5816	-1	5prime_fragment	FALSE	canonical	1	117212	junction_10	32544.083697567607	NA	1	NA	TRUE	NA	NA	NA	A	coding	585	1758	27	1784	20.0	NA	False	AATAAA	-16
PB.12360.1	chrX	-	1892	12	full-splice_match	MPP1	ENST00000369534.7	2042	12	148	2	24	0	multi-exon	FALSE	canonical	1	458914	junction_11	96472.23109156916	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	1	1401	25.0	2	True	AATAAA	-20
PB.926.6	chr1	-	3060	14	full-splice_match	SCYL3	ENST00000367772.8	3090	14	14	16	7	-16	multi-exon	FALSE	canonical	1	7516	junction_3	32711.456742447554	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	209	2437	40.0	-50	True	AATAAA	-16
PB.926.5	chr1	-	2815	13	novel_not_in_catalog	SCYL3	novel	6364	13	NA	NA	56	-11	any annotated donor/acceptor	FALSE	canonical	1	126	junction_4	32965.61799593884	NA	1	NA	TRUE	NA	NA	NA	C	coding	675	2028	160	2187	35.0	-1	True	AATAAA	-21
PB.8545.2	chr3	-	4491	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	0	-1344	0	1344	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	50	829	25.0	-1	True	NA	NA
PB.8868.11	chr4	-	3206	10	full-splice_match	KLHL8	ENST00000273963.9	5621	10	83	2332	0	9	multi-exon	FALSE	canonical	1	59622	junction_7	37186.902072877456	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	260	2122	35.0	10	True	ATTAAA	-27
PB.8868.10	chr4	-	3155	9	full-splice_match	KLHL8	ENST00000425278.6	4049	9	-7	901	4	500	multi-exon	FALSE	canonical	1	8842	junction_7	47392.75398729219	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	267	1580	85.0	3	True	AAAAAG	-40
PB.354.12	chr1	+	3529	17	novel_not_in_catalog	AL451062.3	novel	4037	26	NA	NA	357	-236499	any annotated donor/acceptor	FALSE	canonical	1	1122	junction_16	99531.15405607621	NA	0	NA	TRUE	NA	NA	NA	B	coding	792	2379	209	2587	95.0	0	True	NA	NA
PB.11597.4	chr9	+	2205	15	incomplete-splice_match	SMC5	ENST00000361138.6	5980	25	-14	36001	-14	-25787	3prime_fragment	FALSE	canonical	1	120445	junction_14	44082.01217767462	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2073	132	2204	45.0	-30	True	AATGAA	-8
PB.933.3	chr1	+	3058	8	full-splice_match	METTL13	ENST00000362019.7	3022	8	-41	5	-23	-5	multi-exon	FALSE	canonical	1	30765	junction_1	125352.89587026389	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	261	2102	25.0	-33	True	ATTAAA	-12
PB.9558.2	chr5	+	4802	19	novel_in_catalog	HMGXB3	novel	5567	21	NA	NA	-17	-10	intron_retention	TRUE	canonical	1	9220	junction_3	114196.44910861035	NA	1	NA	TRUE	NA	NA	NA	C	coding	1126	3381	482	3862	15.0	-38	True	AATAAA	-18
PB.5454.9	chr18	+	2712	15	incomplete-splice_match	FHOD3	ENST00000257209.8	4967	25	-1	70083	-1	-1497	3prime_fragment	FALSE	canonical	1	46184	junction_1	16397.694788989615	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	124	2139	30.0	0	True	AATATA	-21
PB.1924.8	chr11	-	2624	14	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	8031	junction_9	233519.5822596003	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	699	1445	20.0	7	True	AATAAA	-37
PB.887.4	chr1	+	2408	11	novel_not_in_catalog	UAP1	novel	2377	11	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	24026	junction_1	225212.9152181109	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	412	1929	40.0	5	True	AATAAA	-26
PB.11647.16	chr9	-	3286	14	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	92935.64108437255	NA	0	NA	TRUE	NA	NA	NA	B	coding	838	2514	771	3284	55.0	11	True	AAAAAG	-13
PB.1924.3	chr11	-	2824	16	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	34883	junction_11	223423.34088000347	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	38	1645	20.0	-12	True	AATAAA	-37
PB.1924.1	chr11	-	2702	15	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	3091	junction_10	236076.52570737805	NA	11	1	TRUE	NA	NA	NA	C	coding	248	747	773	1519	10.0	-10	True	AATAAA	-41
PB.1924.7	chr11	-	2668	17	novel_not_in_catalog	ARFGAP2	novel	2937	15	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	360	junction_1	227385.58930863312	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	27	1592	20.0	-1	True	AATAAA	-37
PB.1924.6	chr11	-	2710	15	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	3517	junction_9	232978.1259485862	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	23	1531	20.0	3	True	AATAAA	-37
PB.1924.5	chr11	-	2845	16	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	8247	junction_11	228269.49322523733	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	26	1666	20.0	0	True	AATAAA	-37
PB.1924.4	chr11	-	2771	16	full-splice_match	ARFGAP2	ENST00000524782.5	2976	16	203	2	0	-2	multi-exon	FALSE	canonical	1	397403	junction_9	165729.35781118163	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	27	1592	20.0	-1	True	AATAAA	-37
PB.9558.1	chr5	+	2437	9	incomplete-splice_match	HMGXB3	ENST00000502717.5	4974	20	-21	25488	-21	-13488	3prime_fragment	FALSE	canonical	1	149025	junction_6	34279.450764087516	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	486	2291	75.0	-42	True	AATACA	-41
PB.4336.17	chr16	+	3285	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	159	-18	combination_of_known_junctions	FALSE	canonical	1	15521	junction_1	408381.8233117226	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	120	2888	85.0	0	True	NA	NA
PB.4336.16	chr16	+	3412	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	46	-27	combination_of_known_junctions	FALSE	canonical	1	15521	junction_1	399828.71280159533	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	233	3001	75.0	16	True	NA	NA
PB.4336.15	chr16	+	3399	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-42	-27	combination_of_known_junctions	FALSE	canonical	1	93203	junction_10	412660.41866134206	NA	1	1	TRUE	NA	NA	NA	C	coding	990	2973	16	2988	75.0	11	True	NA	NA
PB.4336.14	chr16	+	3524	24	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-45	-27	no_combination_of_known_junctions	FALSE	canonical	1	21257	junction_23	419636.1658302608	NA	2	NA	TRUE	NA	NA	NA	C	coding	1019	3060	19	3078	75.0	8	True	NA	NA
PB.4336.13	chr16	+	3425	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-52	-27	no_combination_of_known_junctions	FALSE	canonical	1	2103	junction_22	406777.64586734626	NA	1	1	TRUE	NA	NA	NA	C	coding	1003	3012	26	3037	75.0	1	True	NA	NA
PB.4336.12	chr16	+	3401	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-53	-18	combination_of_known_junctions	FALSE	canonical	1	126491	junction_1	391364.4133878914	NA	2	NA	TRUE	NA	NA	NA	C	coding	984	2955	27	2981	85.0	0	True	NA	NA
PB.4336.11	chr16	+	4003	22	novel_not_in_catalog	ATXN2L	novel	4574	21	NA	NA	-57	-27	intron_retention	FALSE	non_canonical	0	0	junction_2	400350.76192776323	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	219	3080	75.0	-4	True	NA	NA
PB.4336.10	chr16	+	3337	23	novel_in_catalog	ATXN2L	novel	4574	21	NA	NA	-21	-27	combination_of_known_junctions	FALSE	canonical	1	87736	junction_22	400174.21712154953	NA	4	NA	TRUE	NA	NA	NA	C	coding	922	2769	181	2949	75.0	32	True	NA	NA
PB.5454.8	chr18	+	4309	14	full-splice_match	FHOD3	ENST00000589114.5	4154	14	-14	-141	-11	141	multi-exon	FALSE	canonical	1	23604	junction_12	23227.112525753684	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	134	2098	30.0	-10	True	NA	NA
PB.3310.1	chr14	-	692	3	full-splice_match	DAD1	ENST00000250498.8	731	3	38	1	-9	-1	multi-exon	FALSE	canonical	1	3136092	junction_1	668825.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	113	342	75	416	10.0	-17	True	ATTAAA	-21
PB.1234.5	chr1	-	7219	19	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-32	0	intron_retention	FALSE	non_canonical	0	0	junction_15	148541.29173660022	NA	3	NA	TRUE	NA	NA	NA	B	coding	1646	4941	259	5199	35.0	-10	True	AATAAA	-17
PB.419.2	chr1	-	1708	3	incomplete-splice_match	LRP8	ENST00000465675.5	2670	16	72259	-1022	2183	203	5prime_fragment	FALSE	canonical	1	136692	junction_1	58957.5	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-17
PB.11934.8	chrM	+	819	1	full-splice_match	MT-ND2	ENST00000361453.3	1042	1	222	1	222	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-9966	False	NA	NA
PB.11934.9	chrM	+	1613	1	full-splice_match	MT-CO1	ENST00000361624.2	1542	1	-3	-68	-3	68	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-9997	False	NA	NA
PB.11934.6	chrM	+	1622	1	full-splice_match	MT-ND1	ENST00000361390.2	956	1	-667	1	-667	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-9999	False	NA	NA
PB.11934.7	chrM	+	1365	1	full-splice_match	MT-ND1	ENST00000361390.2	956	1	-410	1	-410	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-9974	False	NA	NA
PB.11934.4	chrM	+	1241	1	full-splice_match	MT-RNR2	ENST00000387347.2	1559	1	317	1	317	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-9989	False	NA	NA
PB.11934.5	chrM	+	771	1	full-splice_match	MT-RNR2	ENST00000387347.2	1559	1	1	787	1	-787	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	NA	NA
PB.11934.2	chrM	+	1678	1	full-splice_match	MT-RNR2	ENST00000387347.2	1559	1	-116	-3	-116	3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-9994	False	NA	NA
PB.11934.3	chrM	+	2009	2	antisense		novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-10000	False	NA	NA
PB.11934.1	chrM	+	2919	1	full-splice_match	MT-RNR2	ENST00000387347.2	1559	1	-328	-1032	-328	1032	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-9986	False	NA	NA
PB.10321.1	chr6	+	4171	8	full-splice_match	QKI	ENST00000361752.7	9463	8	493	4799	-34	-3	multi-exon	FALSE	canonical	1	417507	junction_6	156782.61509738734	NA	4	NA	TRUE	NA	NA	NA	C	coding	341	1026	59	1084	15.0	-5070	False	AATAAA	-20
PB.10321.3	chr6	+	5167	7	full-splice_match	QKI	ENST00000453779.6	5685	7	508	10	-19	-10	multi-exon	FALSE	canonical	1	230247	junction_6	224391.7088518919	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	44	1003	40.0	-5055	False	AATAAA	-11
PB.10321.2	chr6	+	2093	8	full-splice_match	QKI	ENST00000361752.7	9463	8	493	6877	-34	267	multi-exon	FALSE	canonical	1	417507	junction_6	156782.61509738734	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	59	1084	85.0	-5070	False	AATATA	-43
PB.10321.5	chr6	+	1812	8	novel_not_in_catalog	QKI	novel	6085	8	NA	NA	22	267	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	324728.36281628825	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	141	803	85.0	-8939	False	AATATA	-43
PB.10321.4	chr6	+	2015	8	full-splice_match	QKI	ENST00000361195.6	1063	8	20	-972	-4	267	multi-exon	FALSE	canonical	1	127132	junction_5	257606.92059129666	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	17	1006	85.0	-5016	False	AATATA	-43
PB.9309.1	chr5	-	1364	2	full-splice_match	SCAMP1-AS1	ENST00000421004.3	1479	2	109	6	-5	-6	multi-exon	FALSE	canonical	1	80578	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-32	True	NA	NA
PB.994.1	chr1	+	2180	1	full-splice_match	AL078644.1	ENST00000609881.1	752	1	-1431	3	-1431	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	161	486	2	487	30.0	-1788	False	AATAAA	-20
PB.11076.1	chr8	+	1642	8	full-splice_match	UBXN8	ENST00000380154.9	1624	8	-22	4	-13	-4	multi-exon	FALSE	canonical	1	53267	junction_1	47288.693438305534	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	546	1034	35.0	-12	True	AATAAA	-34
PB.7475.14	chr21	-	2953	18	full-splice_match	APP	ENST00000346798.7	3467	18	-113	627	0	154	multi-exon	FALSE	canonical	1	1830298	junction_10	1442683.2600734793	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	148	2460	30.0	-2	True	TTTAAA	-23
PB.11076.2	chr8	+	1452	8	full-splice_match	UBXN8	ENST00000265616.9	1450	8	-6	4	-6	-4	multi-exon	FALSE	canonical	1	83784	junction_7	36315.22477823699	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	32	844	35.0	-5	True	AATAAA	-34
PB.837.1	chr1	-	3682	2	novel_in_catalog	ETV3	novel	5254	5	NA	NA	-28	381	intron_retention	FALSE	canonical	1	142576	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.1381.10	chr10	+	4097	9	novel_not_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-26	-16	any annotated donor/acceptor	FALSE	canonical	1	426	junction_1	87343.85794805494	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	719	2347	55.0	-9343	False	AATAAA	-14
PB.1381.11	chr10	+	3227	5	novel_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	-11	-16	no_combination_of_known_junctions	FALSE	canonical	1	1793	junction_2	50952.87898821322	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	347	1477	55.0	-7	True	AATAAA	-14
PB.1381.12	chr10	+	3541	7	novel_in_catalog	CSGALNACT2	novel	3730	8	NA	NA	1	-9	no_combination_of_known_junctions	FALSE	canonical	1	6558	junction_4	88277.2362012616	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	335	1318	55.0	5	True	AATAAA	-21
PB.1381.13	chr10	+	3700	8	full-splice_match	CSGALNACT2	ENST00000374466.3	3730	8	21	9	21	-9	multi-exon	FALSE	canonical	1	65897	junction_5	71942.59972551247	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	315	1943	55.0	8	True	AATAAA	-21
PB.1846.18	chr11	-	4553	22	novel_in_catalog	HPS5	novel	4725	22	NA	NA	34	-184	no_combination_of_known_junctions	FALSE	canonical	1	3366	junction_20	49950.40587434038	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	245	3523	40.0	-8	True	AATAAA	-27
PB.1846.19	chr11	-	4430	22	novel_in_catalog	HPS5	novel	4725	22	NA	NA	4	-184	combination_of_known_junctions	FALSE	canonical	1	18824	junction_21	39809.22893294754	NA	2	NA	TRUE	NA	NA	NA	C	coding	1015	3048	353	3400	40.0	0	True	AATAAA	-27
PB.10629.6	chr7	+	2426	10	novel_not_in_catalog	DTX2	novel	566	4	NA	NA	-674	0	any annotated donor/acceptor	FALSE	canonical	1	611	junction_1	89305.40983862313	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	60	2033	15.0	NA	False	AATAAA	-19
PB.10629.7	chr7	+	2282	9	novel_not_in_catalog	DTX2	novel	566	4	NA	NA	-671	0	any annotated donor/acceptor	FALSE	canonical	1	611	junction_1	89210.34125374354	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	57	1889	15.0	NA	False	AATAAA	-19
PB.3864.12	chr15	-	1882	14	novel_in_catalog	SPPL2A	novel	7372	15	NA	NA	-3	-130	combination_of_known_junctions	FALSE	canonical	1	8322	junction_6	133617.1063967715	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	180	1121	30.0	-7	True	AATAAA	-16
PB.3864.13	chr15	-	2278	8	incomplete-splice_match	SPPL2A	ENST00000261854.9	7372	15	106	32658	7	-9008	3prime_fragment	FALSE	canonical	1	67986	junction_7	137194.33602368427	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	170	1135	90.0	3	True	NA	NA
PB.3864.10	chr15	-	1802	14	novel_in_catalog	SPPL2A	novel	7372	15	NA	NA	5	-123	no_combination_of_known_junctions	FALSE	canonical	1	18480	junction_1	138514.27357282816	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	172	1530	40.0	1	True	AATAAA	-23
PB.3864.11	chr15	-	2956	14	novel_in_catalog	SPPL2A	novel	7372	15	NA	NA	2	-130	intron_retention	FALSE	canonical	1	48370	junction_5	128143.46755859553	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	175	1341	30.0	-2	True	AATAAA	-16
PB.1846.10	chr11	-	4767	24	novel_not_in_catalog	HPS5	novel	4725	22	NA	NA	6	-100	any annotated donor/acceptor	FALSE	canonical	1	612	junction_22	59509.0014592795	NA	1	1	TRUE	NA	NA	NA	C	coding	1104	3315	339	3653	40.0	2	True	AATAAA	-15
PB.1846.11	chr11	-	4701	23	full-splice_match	HPS5	ENST00000349215.7	4491	23	-16	-194	8	194	multi-exon	FALSE	canonical	1	36087	junction_22	40806.80729340884	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	295	3684	30.0	4	True	AATAAA	-14
PB.1846.12	chr11	-	4571	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	36	-103	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_22	53303.618767052045	NA	0	NA	TRUE	NA	NA	NA	C	coding	1104	3315	146	3460	35.0	-6	True	AATAAA	-12
PB.9315.6	chr5	+	3585	16	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	6	-6	intron_retention	FALSE	canonical	1	10438	junction_1	139595.36117405747	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	762	2216	10.0	0	True	AATAAA	-15
PB.1846.14	chr11	-	4514	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	1	-180	combination_of_known_junctions	FALSE	canonical	1	10828	junction_22	44386.350457382956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	91	3480	30.0	278	False	AATAAA	-31
PB.1846.16	chr11	-	4588	23	novel_in_catalog	HPS5	novel	4725	22	NA	NA	4	-183	no_combination_of_known_junctions	FALSE	canonical	1	10737	junction_22	44399.851834989364	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	168	3557	35.0	0	True	AATAAA	-28
PB.1846.17	chr11	-	4535	22	full-splice_match	HPS5	ENST00000396253.7	4725	22	6	184	6	-184	multi-exon	FALSE	canonical	1	34157	junction_21	37269.88608159605	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	458	3505	40.0	283	False	AATAAA	-27
PB.11836.4	chr9	+	5815	45	novel_not_in_catalog	AL672142.1	novel	378	5	NA	NA	6219	50072	any annotated donor/acceptor	FALSE	canonical	1	4077	junction_1	150076.2547987761	NA	0	NA	TRUE	NA	NA	NA	B	coding	1555	4668	733	5400	25.0	-2	True	ATTAAA	-14
PB.8928.10	chr4	+	3748	23	full-splice_match	SEC24B	ENST00000399100.6	3780	23	26	6	24	-6	multi-exon	FALSE	canonical	1	58591	junction_1	74763.52965824098	NA	1	1	TRUE	NA	NA	NA	C	coding	1233	3702	32	3733	65.0	13	True	AATAAA	-5
PB.8928.11	chr4	+	4398	22	novel_in_catalog	SEC24B	novel	4066	25	NA	NA	30	-440	no_combination_of_known_junctions	FALSE	canonical	1	1533	junction_8	95360.08171936416	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	26	1876	10.0	19	True	ATTAAA	-17
PB.7186.1	chr20	+	2450	5	novel_not_in_catalog	MGME1	novel	2336	5	NA	NA	-321	-6	any annotated donor/acceptor	FALSE	canonical	1	5037	junction_1	111917.73835361176	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	415	1443	20.0	-3987	False	AATAAA	-16
PB.3418.1	chr14	+	3123	1	incomplete-splice_match	ARF6	ENST00000298316.6	3865	2	839	1	839	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	64	195	140	334	20.0	-869	False	AATAAA	-16
PB.7186.3	chr20	+	2535	4	incomplete-splice_match	MGME1	ENST00000377710.9	2336	5	454	6	252	-6	5prime_fragment	FALSE	canonical	1	193464	junction_1	49196.79234349419	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	500	1528	20.0	-3212	False	AATAAA	-16
PB.7186.2	chr20	+	2247	6	novel_not_in_catalog	MGME1	novel	2336	5	NA	NA	-28	-2	any annotated donor/acceptor	FALSE	canonical	1	21651	junction_3	114386.40611786001	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	163	1236	15.0	-23	True	AATAAA	-20
PB.7186.5	chr20	+	2662	3	full-splice_match	MGME1	ENST00000467391.1	740	3	-1033	-889	-49	-2	multi-exon	FALSE	canonical	1	32927	junction_1	138888.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	843	1364	15.0	-3555	False	AATAAA	-20
PB.7186.4	chr20	+	2155	5	full-splice_match	MGME1	ENST00000377710.9	2336	5	179	2	19	-2	multi-exon	FALSE	canonical	1	174375	junction_1	52203.311606520714	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	116	1144	15.0	-8	True	AATAAA	-20
PB.7186.7	chr20	+	2394	2	incomplete-splice_match	MGME1	ENST00000377709.1	1936	5	-10	19007	-10	-18116	3prime_fragment	FALSE	canonical	1	174375	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	145	696	60.0	-5	True	AATAAA	-26
PB.7186.6	chr20	+	1971	4	novel_in_catalog	MGME1	novel	2336	5	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	32927	junction_2	113408.40389886848	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	152	673	15.0	-12	True	AATAAA	-20
PB.1572.2	chr10	+	1742	10	full-splice_match	ZDHHC16	ENST00000352634.8	1718	10	-27	3	5	0	multi-exon	FALSE	canonical	1	120850	junction_6	142580.37477788614	NA	1	1	TRUE	NA	NA	NA	C	coding	361	1086	185	1270	35.0	-2	True	AATAAA	-15
PB.1572.3	chr10	+	1672	10	full-splice_match	ZDHHC16	ENST00000353979.7	1647	10	-28	3	6	0	multi-exon	FALSE	canonical	1	39143	junction_4	155492.8936745469	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	184	1200	35.0	-1	True	AATAAA	-15
PB.1572.1	chr10	+	1795	11	full-splice_match	ZDHHC16	ENST00000370854.7	1798	11	0	3	0	0	multi-exon	FALSE	canonical	1	140085	junction_1	111257.62738387872	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	190	1323	35.0	-7	True	AATAAA	-15
PB.1572.6	chr10	+	2354	11	full-splice_match	ZDHHC16	ENST00000370854.7	1798	11	12	-568	-9	564	multi-exon	FALSE	canonical	1	140085	junction_1	111257.62738387872	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	178	1311	25.0	5	True	NA	NA
PB.3418.3	chr14	+	2388	2	full-splice_match	ARF6	ENST00000298316.6	3865	2	-17	1494	-17	-1494	multi-exon	FALSE	canonical	1	554371	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	565	1092	25.0	-21	True	AATAAA	-25
PB.1572.4	chr10	+	1969	12	full-splice_match	ZDHHC16	ENST00000393760.5	2014	12	46	-1	7	1	multi-exon	FALSE	canonical	1	23341	junction_1	164425.76400711146	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	363	1496	30.0	0	True	AATAAA	-16
PB.1572.5	chr10	+	1574	8	novel_in_catalog	ZDHHC16	novel	2014	12	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	14548	junction_4	182310.05390167778	NA	12	1	TRUE	NA	NA	NA	C	coding	191	576	180	755	35.0	3	True	AATAAA	-15
PB.11670.2	chr9	-	4196	6	full-splice_match	ZNF782	ENST00000481138.5	4213	6	-18	35	-18	-35	multi-exon	FALSE	canonical	1	9571	junction_5	12965.28200387481	NA	4	NA	TRUE	NA	NA	NA	C	coding	699	2100	681	2780	80.0	-1	True	AATAAA	-7
PB.11298.6	chr8	+	5181	8	full-splice_match	EMC2	ENST00000517784.5	640	8	-2	-4539	2	4539	multi-exon	FALSE	canonical	1	2171	junction_7	226333.60521142237	NA	4	NA	TRUE	NA	NA	NA	C	coding	212	639	25	663	25.0	-2	True	AATAAA	-27
PB.1945.29	chr11	-	2439	12	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3054	-17801	no_combination_of_known_junctions	TRUE	canonical	1	10649	junction_7	263474.1914538271	NA	1	NA	TRUE	NA	NA	NA	B	coding	284	855	749	1603	20.0	7	True	AATAAA	-18
PB.1945.28	chr11	-	2549	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3092	-17801	no_combination_of_known_junctions	FALSE	canonical	1	3990	junction_5	263311.3448108083	NA	2	NA	TRUE	NA	NA	NA	B	coding	309	930	336	1265	20.0	0	True	AATAAA	-18
PB.1945.27	chr11	-	2509	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3055	-17801	no_combination_of_known_junctions	FALSE	canonical	1	4683	junction_12	235015.83374453493	NA	0	NA	TRUE	NA	NA	NA	B	coding	491	1476	198	1673	20.0	6	True	AATAAA	-18
PB.1945.26	chr11	-	2525	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3035	-17801	no_combination_of_known_junctions	FALSE	canonical	1	22972	junction_12	230640.36790620527	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	214	1689	20.0	26	True	AATAAA	-18
PB.1945.24	chr11	-	2562	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3043	-17801	no_combination_of_known_junctions	FALSE	canonical	1	12888	junction_12	248623.32777790772	NA	0	NA	TRUE	NA	NA	NA	B	coding	491	1476	251	1726	20.0	18	True	AATAAA	-18
PB.1945.23	chr11	-	2692	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3026	-17801	no_combination_of_known_junctions	FALSE	canonical	1	3617	junction_12	235271.7037264221	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	381	1856	20.0	35	True	AATAAA	-18
PB.1945.22	chr11	-	2677	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-2982	-17801	no_combination_of_known_junctions	FALSE	canonical	1	12888	junction_12	283307.8717930675	NA	1	NA	TRUE	NA	NA	NA	B	coding	491	1476	366	1841	20.0	-3	True	AATAAA	-18
PB.1945.21	chr11	-	2647	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3053	-17801	no_combination_of_known_junctions	FALSE	canonical	1	29719	junction_11	250939.140809836	NA	2	NA	TRUE	NA	NA	NA	B	coding	504	1515	297	1811	20.0	8	True	AATAAA	-18
PB.1945.20	chr11	-	2743	15	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3093	-17801	any annotated donor/acceptor	FALSE	canonical	1	630	junction_5	292223.4842026488	NA	0	NA	TRUE	NA	NA	NA	B	coding	319	960	337	1296	20.0	-1	True	AATAAA	-18
PB.1449.1	chr10	-	2771	11	full-splice_match	PPA1	ENST00000373232.7	1295	11	28	-1504	28	1504	multi-exon	FALSE	canonical	1	321064	junction_6	446204.9369599579	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	73	942	25.0	-5	True	NA	NA
PB.10092.17	chr6	-	3493	13	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27760	-53344	any annotated donor/acceptor	FALSE	canonical	1	2242	junction_3	375578.9867605433	NA	3	NA	TRUE	NA	NA	NA	B	coding	436	1311	211	1521	30.0	1080	False	AATAAA	-16
PB.9406.12	chr5	-	1757	10	incomplete-splice_match	SEMA6A	ENST00000257414.12	4256	20	-456	40909	83	-18	3prime_fragment	FALSE	canonical	1	141162	junction_6	26735.248485016094	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	706	1671	35.0	174	False	AATAAA	-15
PB.1449.2	chr10	-	1255	11	full-splice_match	PPA1	ENST00000373232.7	1295	11	32	8	32	-8	multi-exon	FALSE	canonical	1	321064	junction_6	446204.9369599579	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	69	938	30.0	-1	True	AATAAA	-13
PB.9406.14	chr5	-	3702	1	novel_in_catalog	SEMA6A	novel	6878	19	NA	NA	111	-21007	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	140	423	2135	2557	60.0	-1	True	NA	NA
PB.3418.7	chr14	+	1603	2	novel_not_in_catalog	ARF6	novel	3865	2	NA	NA	9	-2290	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	coding	175	528	576	1103	25.0	5	True	AGTAAA	-16
PB.10092.11	chr6	-	3472	11	full-splice_match	SYNCRIP	ENST00000616122.4	6764	11	-8	3300	-8	-2756	multi-exon	FALSE	canonical	1	75283	junction_7	348768.3347548054	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	281	1675	25.0	5	True	AATAAA	-23
PB.11297.4	chr8	-	3954	7	novel_not_in_catalog	EIF3E	novel	1543	13	NA	NA	0	-1949	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	718936.7774505048	NA	3	NA	TRUE	NA	NA	NA	C	coding	172	519	15	533	25.0	0	True	ATTAAA	-15
PB.3418.6	chr14	+	3403	2	novel_not_in_catalog	ARF6	novel	3865	2	NA	NA	4	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	175	528	87	614	20.0	0	True	AATAAA	-16
PB.10092.18	chr6	-	3382	12	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-28636	-53344	no_combination_of_known_junctions	FALSE	canonical	1	28014	junction_11	358520.1212733181	NA	0	NA	TRUE	NA	NA	NA	B	coding	562	1689	134	1822	30.0	-4	True	AATAAA	-16
PB.10092.19	chr6	-	3393	12	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27732	-53344	any annotated donor/acceptor	FALSE	canonical	1	20737	junction_1	358869.90451044904	NA	1	NA	TRUE	NA	NA	NA	B	coding	545	1638	183	1820	30.0	-31	True	AATAAA	-16
PB.1548.1	chr10	+	3094	3	full-splice_match	SLC35G1	ENST00000483386.5	3036	3	-60	2	-42	-2	multi-exon	FALSE	canonical	1	10037	junction_1	5794.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-66	True	NA	NA
PB.8080.12	chr3	-	4175	17	novel_not_in_catalog	SMARCC1	novel	6375	28	NA	NA	28	-751	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	221515.19814616418	NA	40	3	TRUE	NA	NA	NA	C	coding	438	1317	57	1373	25.0	39	True	NA	NA
PB.1548.3	chr10	+	2286	3	novel_in_catalog	SLC35G1	novel	2402	3	NA	NA	5	-60	no_combination_of_known_junctions	FALSE	canonical	1	6942	junction_1	9364.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	348	1047	57	1103	25.0	-19	True	ATTAAA	-15
PB.1548.2	chr10	+	2351	3	full-splice_match	SLC35G1	ENST00000427197.1	2402	3	-3	54	-3	-54	multi-exon	FALSE	canonical	1	11843	junction_1	6913.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	365	1098	65	1162	20.0	-27	True	ATTAAA	-21
PB.1548.5	chr10	+	3501	3	full-splice_match	SLC35G1	ENST00000427197.1	2402	3	-10	-1089	-10	-2	multi-exon	FALSE	canonical	1	11843	junction_1	6913.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	365	1098	72	1169	20.0	-34	True	AATAAA	-18
PB.1548.4	chr10	+	3455	3	novel_in_catalog	SLC35G1	novel	2402	3	NA	NA	-14	-1	no_combination_of_known_junctions	TRUE	canonical	1	6942	junction_1	9364.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	348	1047	76	1122	20.0	-38	True	AATAAA	-19
PB.3797.5	chr15	+	4980	18	full-splice_match	RTF1	ENST00000389629.8	5021	18	31	10	3	-10	multi-exon	FALSE	canonical	1	363451	junction_16	82142.93843519458	NA	4	NA	TRUE	NA	NA	NA	C	coding	670	2013	102	2114	45.0	3	True	AATAAA	-15
PB.3797.4	chr15	+	3721	18	full-splice_match	RTF1	ENST00000389629.8	5021	18	29	1271	1	-1271	multi-exon	FALSE	canonical	1	363451	junction_16	82142.93843519458	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	104	2116	40.0	1	True	AATAAA	-18
PB.3797.1	chr15	+	2736	17	novel_in_catalog	RTF1	novel	327	3	NA	NA	-11	1153	no_combination_of_known_junctions	FALSE	canonical	1	11485	junction_2	147575.19217227396	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	442	1980	25.0	-11	True	ATTAAA	-16
PB.3797.3	chr15	+	4410	18	full-splice_match	RTF1	ENST00000389629.8	5021	18	28	583	0	-583	multi-exon	FALSE	canonical	1	363451	junction_16	82142.93843519458	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	105	2117	25.0	0	True	AATAAA	-18
PB.3797.2	chr15	+	2883	18	full-splice_match	RTF1	ENST00000389629.8	5021	18	19	2119	-9	1154	multi-exon	FALSE	canonical	1	363451	junction_16	82142.93843519458	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	114	2126	30.0	-9	True	ATTAAA	-17
PB.2332.5	chr11	+	3676	1	novel_in_catalog	SORL1	novel	10904	48	NA	NA	-64	-91033	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	124	375	17	391	90.0	-4	True	NA	NA
PB.2332.4	chr11	+	4057	14	incomplete-splice_match	SORL1	ENST00000532451.1	2165	15	-66	-393	-66	393	intron_retention	FALSE	canonical	1	192989	junction_1	72016.39307117685	NA	1	NA	TRUE	NA	NA	NA	C	coding	688	2067	19	2085	100.0	-6	True	ATTAAA	-38
PB.2332.7	chr11	+	3943	14	incomplete-splice_match	SORL1	ENST00000532451.1	2165	15	-63	-282	-63	282	intron_retention	FALSE	canonical	1	192989	junction_1	72016.39307117685	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	16	2082	50.0	-3	True	NA	NA
PB.2332.6	chr11	+	6658	47	novel_in_catalog	SORL1	novel	10904	48	NA	NA	-63	0	no_combination_of_known_junctions	FALSE	canonical	1	5689	junction_1	112195.40045702073	NA	0	NA	TRUE	NA	NA	NA	C	coding	2175	6528	16	6543	90.0	-3	True	TTTAAA	-42
PB.2332.1	chr11	+	3695	23	incomplete-splice_match	SORL1	ENST00000260197.11	10904	48	118	63076	-59	11780	3prime_fragment	FALSE	canonical	1	192989	junction_1	71325.47242028806	NA	0	NA	TRUE	NA	NA	NA	C	coding	1148	3447	12	3458	30.0	1	True	AATAAA	-20
PB.2332.3	chr11	+	6623	48	full-splice_match	SORL1	ENST00000260197.11	10904	48	266	4015	89	0	multi-exon	FALSE	canonical	1	192989	junction_1	102910.12103289443	NA	0	NA	TRUE	NA	NA	NA	C	coding	2110	6333	176	6508	90.0	-610	False	TTTAAA	-42
PB.2332.2	chr11	+	6872	49	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	-66	0	any annotated donor/acceptor	TRUE	canonical	1	616	junction_7	126295.85784630857	NA	0	NA	TRUE	NA	NA	NA	C	coding	1880	5643	1115	6757	90.0	-6	True	TTTAAA	-42
PB.11805.3	chr9	-	3208	13	novel_not_in_catalog	SH2D3C	novel	2750	11	NA	NA	14	0	any annotated donor/acceptor	FALSE	canonical	1	1681	junction_12	58521.197399069286	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	40	2781	5.0	-2	True	AATAAA	-15
PB.2332.9	chr11	+	6658	47	novel_in_catalog	SORL1	novel	10904	48	NA	NA	-60	0	no_combination_of_known_junctions	FALSE	canonical	1	12435	junction_22	117201.39487398135	NA	9	2	TRUE	NA	NA	NA	C	coding	2176	6531	13	6543	90.0	0	True	TTTAAA	-42
PB.2332.8	chr11	+	3519	13	novel_not_in_catalog	SORL1	novel	10904	48	NA	NA	-63	-12475	any annotated donor/acceptor	FALSE	canonical	1	4975	junction_12	108137.35078628657	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	16	1755	65.0	-3	True	AATAAA	-8
PB.11805.2	chr9	-	3236	13	novel_not_in_catalog	SH2D3C	novel	2750	11	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	1139	junction_12	58610.20753170665	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	104	2809	5.0	-5	True	AATAAA	-15
PB.8173.1	chr3	+	810	4	full-splice_match	SPCS1	ENST00000602728.1	832	4	22	0	-9	0	multi-exon	FALSE	canonical	1	1890182	junction_1	922224.0435776258	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	148	456	25.0	-18	True	ATTAAA	-12
PB.8173.2	chr3	+	1986	4	full-splice_match	SPCS1	ENST00000602728.1	832	4	22	-1176	-9	1163	multi-exon	FALSE	canonical	1	1890182	junction_1	922224.0435776258	NA	3	NA	TRUE	NA	NA	NA	C	coding	102	309	148	456	60.0	-18	True	TTTAAA	-33
PB.8173.3	chr3	+	1706	2	incomplete-splice_match	SPCS1	ENST00000602728.1	832	4	22	0	-9	0	intron_retention	FALSE	canonical	1	1890182	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	54	165	148	312	25.0	-18	True	ATTAAA	-12
PB.4579.2	chr16	-	4479	24	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	2391	junction_12	197282.35680022248	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	2126	3796	40.0	-12	True	AATAAA	-24
PB.4579.3	chr16	-	4450	24	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	4079	junction_12	197075.41480529867	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	2097	3767	40.0	-12	True	AATAAA	-24
PB.8189.1	chr3	-	6583	14	novel_not_in_catalog	IL17RD	novel	8720	13	NA	NA	21	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	16010.912128033107	NA	2	1	TRUE	NA	NA	NA	C	coding	739	2220	69	2288	20.0	-2	True	AATAAA	-13
PB.4579.6	chr16	-	4318	23	novel_not_in_catalog	MBTPS1	novel	2925	2	NA	NA	-13	0	any annotated donor/acceptor	FALSE	canonical	1	3012	junction_21	163426.16186670173	NA	0	NA	TRUE	NA	NA	NA	C	coding	1041	3126	510	3635	40.0	-15	True	AATAAA	-24
PB.4579.7	chr16	-	4222	22	novel_in_catalog	MBTPS1	novel	2925	2	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	17799	junction_11	163241.20016365583	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	2130	3539	40.0	-31	True	AATAAA	-24
PB.4579.4	chr16	-	4258	23	full-splice_match	MBTPS1	ENST00000343411.7	4338	23	80	0	-8	0	multi-exon	FALSE	canonical	1	346556	junction_22	105543.8909867058	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	417	3575	40.0	8	True	AATAAA	-24
PB.4579.5	chr16	-	6856	22	novel_in_catalog	MBTPS1	novel	2925	2	NA	NA	-27	0	intron_retention	FALSE	canonical	1	346556	junction_21	108025.66723536709	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	524	3244	40.0	-29	True	AATAAA	-24
PB.8094.1	chr3	-	2791	20	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	6	4	intron_retention	FALSE	canonical	1	74992	junction_19	83861.61006796337	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	85	1617	5.0	-17	True	AATAAA	-20
PB.8094.2	chr3	-	4360	20	incomplete-splice_match	SLC26A6	ENST00000420764.6	2630	21	4	1	4	-1	intron_retention	FALSE	canonical	1	133922	junction_15	77038.05736322256	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	1885	4098	10.0	-19	True	AATAAA	-15
PB.8094.3	chr3	-	2606	21	full-splice_match	SLC26A6	ENST00000420764.6	2630	21	23	1	-6	-1	multi-exon	FALSE	canonical	1	74992	junction_20	82019.00648537203	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	68	2344	10.0	0	True	AATAAA	-15
PB.8094.4	chr3	-	4331	20	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	62300	junction_13	84001.07028034683	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	2994	4070	15.0	-17	True	AATAAA	-14
PB.8094.5	chr3	-	3499	20	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	-7	0	intron_retention	FALSE	canonical	1	74992	junction_19	81797.28993729483	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	69	2147	15.0	-1	True	AATAAA	-14
PB.8094.6	chr3	-	5789	17	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	-7	0	intron_retention	FALSE	canonical	1	133922	junction_12	77764.77193371266	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	1867	3336	15.0	-1	True	AATAAA	-14
PB.8094.7	chr3	-	2751	20	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	7	0	intron_retention	FALSE	canonical	1	30711	junction_14	97316.92693534103	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	1591	2490	15.0	-16	True	AATAAA	-14
PB.8094.8	chr3	-	2592	21	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1312	junction_13	93685.32023613677	NA	1	1	TRUE	NA	NA	NA	C	coding	357	1074	1258	2331	15.0	-1	True	AATAAA	-14
PB.8094.9	chr3	-	5370	18	novel_in_catalog	SLC26A6	novel	2630	21	NA	NA	-12	0	intron_retention	FALSE	canonical	1	62300	junction_11	84705.8492027713	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	1872	2939	15.0	-6	True	AATAAA	-14
PB.1108.16	chr1	-	3007	11	incomplete-splice_match	INTS7	ENST00000366993.7	3422	20	-6	35492	0	-10716	3prime_fragment	FALSE	canonical	1	166877	junction_2	30568.667583000733	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	106	1593	35.0	2	True	NA	NA
PB.302.13	chr1	-	3183	19	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	11	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56147.647858372286	NA	5	NA	TRUE	NA	NA	NA	C	coding	749	2250	27	2276	5.0	0	True	GATAAA	-15
PB.962.14	chr1	+	2382	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	0	4453	0	-4450	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	144	1796	10.0	0	True	AAAAAG	-19
PB.6057.4	chr19	+	3299	6	full-splice_match	ZNF226	ENST00000589160.5	656	6	20	-2663	0	133	multi-exon	FALSE	canonical	1	19564	junction_2	121016.97429931059	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-8
PB.7500.28	chr21	-	2393	11	novel_in_catalog	GART	novel	3341	22	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	1	4955	junction_10	277257.42215459264	NA	2	1	TRUE	NA	NA	NA	C	coding	433	1302	340	1641	20.0	13	True	AATAAA	-11
PB.7500.29	chr21	-	1372	5	incomplete-splice_match	GART	ENST00000476524.1	806	6	-33	254	2	183	3prime_fragment	FALSE	canonical	1	530144	junction_4	90772.95659053692	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	90	635	100.0	-1	True	NA	NA
PB.7500.22	chr21	-	3137	22	full-splice_match	GART	ENST00000381815.8	3341	22	26	178	2	-176	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	1	NA	TRUE	NA	NA	NA	C	coding	1010	3033	90	3122	40.0	-1	True	AATGAA	-15
PB.7500.23	chr21	-	2871	17	incomplete-splice_match	GART	ENST00000381815.8	3341	22	22	6857	-2	-1600	3prime_fragment	FALSE	canonical	1	420544	junction_5	183063.38689729467	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	94	2454	85.0	-5	True	NA	NA
PB.7500.21	chr21	-	3047	21	novel_in_catalog	GART	novel	3341	22	NA	NA	3	-94	no_combination_of_known_junctions	FALSE	canonical	1	10347	junction_20	259334.65733914165	NA	3	1	TRUE	NA	NA	NA	C	coding	964	2895	56	2950	65.0	0	True	AAGAAA	-8
PB.7500.26	chr21	-	2143	11	full-splice_match	GART	ENST00000361093.9	2149	11	3	3	3	-3	multi-exon	FALSE	canonical	1	509546	junction_4	170543.61589212302	NA	2	NA	TRUE	NA	NA	NA	C	coding	433	1302	89	1390	20.0	0	True	AATAAA	-12
PB.7500.27	chr21	-	2327	10	novel_in_catalog	GART	novel	3341	22	NA	NA	2	-3	intron_retention	FALSE	canonical	1	509546	junction_3	179237.86729833158	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	90	1037	20.0	-1	True	AATAAA	-12
PB.7500.24	chr21	-	2003	15	incomplete-splice_match	GART	ENST00000381815.8	3341	22	22	13470	-2	3121	3prime_fragment	FALSE	canonical	1	420544	junction_3	183127.71061815004	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1908	94	2001	15.0	-5	True	NA	NA
PB.7500.25	chr21	-	2380	11	novel_in_catalog	GART	novel	3341	22	NA	NA	-11	-3	no_combination_of_known_junctions	FALSE	canonical	1	19879	junction_10	273547.7783412068	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	326	1627	20.0	-1	True	AATAAA	-12
PB.349.1	chr1	-	1660	8	full-splice_match	ELOVL1	ENST00000621943.4	1625	8	-37	2	-37	-2	multi-exon	FALSE	canonical	1	95747	junction_7	517982.73526598606	NA	3	NA	TRUE	NA	NA	NA	C	coding	279	840	305	1144	20.0	271	False	ATTAAA	-19
PB.6057.2	chr19	+	5120	5	full-splice_match	ZNF226	ENST00000588795.5	641	5	-30	-4449	2	0	multi-exon	FALSE	canonical	1	83125	junction_1	93325.0870944544	NA	2	NA	TRUE	NA	NA	NA	C	coding	686	2061	3051	5111	30.0	-18	True	TATAAA	-14
PB.7265.35	chr20	-	3547	16	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	93647	junction_12	433758.58234786167	NA	10	NA	TRUE	NA	NA	NA	C	coding	367	1104	2291	3394	20.0	27	True	AATAAA	-13
PB.7265.34	chr20	-	3735	16	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	212934	junction_1	375460.4948961031	NA	2	1	TRUE	NA	NA	NA	C	coding	367	1104	2479	3582	20.0	1	True	AATAAA	-13
PB.7265.37	chr20	-	2063	18	full-splice_match	RBM39	ENST00000444878.5	2124	18	10	51	0	0	multi-exon	FALSE	canonical	1	212934	junction_1	406851.45093536	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	856	1959	20.0	21	True	AATAAA	-20
PB.7265.31	chr20	-	3896	16	full-splice_match	RBM39	ENST00000463004.5	4580	16	-33	717	5	0	multi-exon	FALSE	canonical	1	212934	junction_1	449008.9011312211	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	2620	3741	10.0	-10	True	AATAAA	-15
PB.7265.33	chr20	-	3826	16	novel_in_catalog	RBM39	novel	5914	18	NA	NA	6	0	intron_retention	FALSE	canonical	1	212934	junction_1	416894.73402251874	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	2619	3722	20.0	-9	True	AATAAA	-20
PB.7265.32	chr20	-	4148	17	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-2	0	intron_retention	FALSE	canonical	1	212934	junction_1	440295.1958601006	NA	3	NA	TRUE	NA	NA	NA	C	coding	265	798	852	1649	20.0	25	True	AATAAA	-13
PB.6349.1	chr2	+	2526	3	novel_in_catalog	FAM228B	novel	2495	3	NA	NA	-26	-1	no_combination_of_known_junctions	FALSE	canonical	1	16002	junction_1	16232.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.9383.10	chr5	+	4614	7	novel_in_catalog	SLC25A46	novel	558	8	NA	NA	-11	-11	no_combination_of_known_junctions	FALSE	canonical	1	2962	junction_4	167682.83215046197	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	91	567	35.0	23	True	AATAAA	-7
PB.9744.4	chr6	+	3407	1	novel_in_catalog	PHACTR1	novel	5332	15	NA	NA	-40	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-10	True	NA	NA
PB.9744.3	chr6	+	3861	5	full-splice_match	PHACTR1	ENST00000379335.7	943	5	45	-2963	-40	-40	multi-exon	FALSE	canonical	1	151397	junction_4	74934.14423136825	NA	6	NA	TRUE	NA	NA	NA	C	coding	144	435	61	495	80.0	-10	True	TTTAAA	-37
PB.9744.2	chr6	+	1393	4	incomplete-splice_match	PHACTR1	ENST00000379335.7	943	5	45	345	-40	-345	intron_retention	FALSE	canonical	1	171297	junction_3	69321.29430573423	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	61	543	25.0	-10	True	CATAAA	-15
PB.9744.1	chr6	+	1533	5	novel_not_in_catalog	PHACTR1	novel	5332	15	NA	NA	210	-347	intron_retention	FALSE	canonical	1	222	junction_4	125584.05700267052	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	383	838	25.0	-6626	False	CATAAA	-13
PB.8964.4	chr4	-	3450	19	full-splice_match	BBS7	ENST00000264499.8	3752	19	-18	320	-18	164	multi-exon	FALSE	canonical	1	66371	junction_1	49955.931370670194	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	203	2350	35.0	8714	False	TATAAA	-21
PB.8964.5	chr4	-	2601	18	full-splice_match	BBS7	ENST00000506636.1	2570	18	-29	-2	8	2	multi-exon	FALSE	canonical	1	108332	junction_3	47219.25369048632	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	167	2185	20.0	-9	True	AATAAA	-15
PB.8964.6	chr4	-	2634	18	novel_not_in_catalog	BBS7	novel	3752	19	NA	NA	-18	-2	any annotated donor/acceptor	FALSE	canonical	1	6503	junction_12	58241.098530934025	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	156	2222	15.0	2	True	AATAAA	-11
PB.8964.7	chr4	-	4178	4	full-splice_match	BBS7	ENST00000502444.1	725	4	13	-3466	13	775	multi-exon	FALSE	canonical	1	198532	junction_3	36112.23527959588	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	162	617	80.0	-4	True	NA	NA
PB.8964.1	chr4	-	3678	19	full-splice_match	BBS7	ENST00000264499.8	3752	19	10	64	0	-64	multi-exon	FALSE	canonical	1	66371	junction_1	49955.931370670194	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	175	2322	75.0	-17	True	NA	NA
PB.8964.2	chr4	-	3723	19	novel_not_in_catalog	BBS7	novel	3752	19	NA	NA	0	-64	intron_retention	FALSE	canonical	1	7176	junction_13	59352.31176920378	NA	2	NA	TRUE	NA	NA	NA	C	coding	730	2193	175	2367	75.0	-17	True	NA	NA
PB.8964.3	chr4	-	3462	19	novel_not_in_catalog	BBS7	novel	3752	19	NA	NA	5	164	intron_retention	FALSE	canonical	1	7176	junction_13	59352.31176920378	NA	1	1	TRUE	NA	NA	NA	C	coding	730	2193	170	2362	35.0	-12	True	TATAAA	-21
PB.7612.1	chr22	+	2036	20	novel_in_catalog	CDC45	novel	2090	20	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	3393	junction_6	120278.76038706629	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	717	1907	5.0	-37	True	AATAAA	-22
PB.7612.3	chr22	+	2029	18	novel_in_catalog	CDC45	novel	2090	20	NA	NA	9	-1	intron_retention	FALSE	canonical	1	274476	junction_17	49728.82055834994	NA	3	NA	TRUE	NA	NA	NA	C	coding	398	1197	702	1898	10.0	-19	True	AATAAA	-24
PB.7612.2	chr22	+	1769	18	full-splice_match	CDC45	ENST00000404724.7	1693	18	-44	-32	-7	-1	multi-exon	FALSE	canonical	1	35916	junction_3	94452.21866789155	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	76	1638	10.0	-35	True	AATAAA	-24
PB.7612.4	chr22	+	1867	19	full-splice_match	CDC45	ENST00000263201.5	1976	19	103	6	-9	-6	multi-exon	FALSE	canonical	1	270758	junction_1	53524.984192800155	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	41	1741	5.0	0	True	AATAAA	-19
PB.5719.1	chr19	-	1801	6	novel_not_in_catalog	SPC24	novel	633	6	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	107942.31204231267	NA	1	NA	TRUE	NA	NA	NA	B	coding	197	594	25	618	25.0	0	True	NA	NA
PB.5719.2	chr19	-	1398	6	novel_not_in_catalog	SPC24	novel	633	6	NA	NA	0	14	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	107942.31204231267	NA	6	1	TRUE	NA	NA	NA	B	coding	197	594	32	625	10.0	9109	False	NA	NA
PB.10274.4	chr6	+	1799	8	full-splice_match	GINM1	ENST00000367419.9	2024	8	23	202	23	-202	multi-exon	TRUE	canonical	1	249670	junction_1	133703.51925595888	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	99	1091	40.0	-88	False	TATAAA	-19
PB.10274.5	chr6	+	2266	9	novel_not_in_catalog	GINM1	novel	2026	8	NA	NA	75	-10	any annotated donor/acceptor	FALSE	canonical	1	260	junction_1	261201.2994889849	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	734	1366	45.0	-6	True	AATAAA	-19
PB.10274.2	chr6	+	1296	8	full-splice_match	GINM1	ENST00000367419.9	2024	8	106	622	106	-622	multi-exon	FALSE	canonical	1	249670	junction_1	133703.51925595888	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	16	1008	80.0	-5	True	NA	NA
PB.10274.3	chr6	+	1907	8	full-splice_match	GINM1	ENST00000367419.9	2024	8	111	6	111	-6	multi-exon	FALSE	canonical	1	249670	junction_1	133703.51925595888	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	11	1003	40.0	0	True	AATAAA	-23
PB.10274.1	chr6	+	1590	8	full-splice_match	GINM1	ENST00000367419.9	2024	8	89	345	89	-345	multi-exon	FALSE	canonical	1	249670	junction_1	133703.51925595888	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	33	1025	80.0	8	True	NA	NA
PB.11328.23	chr8	+	3454	6	incomplete-splice_match	FAM91A1	ENST00000334705.11	5511	24	36808	4	-3494	-4	5prime_fragment	FALSE	canonical	1	13501	junction_1	24578.307228936657	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	93	710	30.0	NA	False	AATAAA	-26
PB.8531.3	chr3	+	1827	6	full-splice_match	ZNF639	ENST00000496856.5	2033	6	204	2	-51	0	multi-exon	FALSE	canonical	1	21845	junction_1	142038.4755330752	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	180	1637	25.0	164	False	TATAAA	-24
PB.2915.6	chr12	-	2541	21	novel_in_catalog	NAA25	novel	6010	24	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	1	4287	junction_20	56078.95409462894	NA	0	NA	TRUE	NA	NA	NA	B	coding	836	2508	34	2541	85.0	-8	True	ACTAAA	-8
PB.2915.7	chr12	-	2551	21	novel_in_catalog	NAA25	novel	6010	24	NA	NA	-8	2	no_combination_of_known_junctions	FALSE	canonical	1	2638	junction_13	56376.31477426935	NA	0	NA	TRUE	NA	NA	NA	B	coding	840	2520	32	2551	85.0	-22	False	ACTAAA	-8
PB.7285.1	chr20	+	3879	8	novel_not_in_catalog	RPRD1B	novel	3874	7	NA	NA	-59	-3	any annotated donor/acceptor	FALSE	canonical	1	3094	junction_7	77146.6016673212	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	462	1442	15.0	0	True	AATAAA	-18
PB.6183.1	chr19	+	2218	6	full-splice_match	ZNF610	ENST00000403906.7	2191	6	-18	-9	-14	0	multi-exon	FALSE	canonical	1	20454	junction_2	3478.937883895026	NA	1	NA	TRUE	NA	NA	NA	A	coding	462	1389	475	1863	5.0	-14	True	AATAAA	-18
PB.7285.2	chr20	+	3591	6	novel_not_in_catalog	RPRD1B	novel	3874	7	NA	NA	-40	-8	any annotated donor/acceptor	FALSE	canonical	1	3003	junction_1	108509.08695477995	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	443	1159	30.0	-329	False	AATAAA	-13
PB.2915.4	chr12	-	2762	23	novel_in_catalog	NAA25	novel	6010	24	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	24869	junction_8	58677.144551388534	NA	0	NA	TRUE	NA	NA	NA	B	coding	590	1773	24	1796	85.0	-14	True	ACTAAA	-8
PB.7285.6	chr20	+	3055	4	incomplete-splice_match	RPRD1B	ENST00000449186.2	591	5	7774	-2520	7774	-7	5prime_fragment	FALSE	canonical	1	191743	junction_2	24332.941435200326	NA	0	NA	TRUE	NA	NA	NA	C	coding	70	213	359	571	30.0	-8649	False	AATAAA	-14
PB.2767.3	chr12	-	4088	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	-12	6042	3	2906	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	3	NA	TRUE	NA	NA	NA	C	coding	381	1146	37	1182	50.0	-33	True	AATAAA	-19
PB.2767.2	chr12	-	4981	11	novel_not_in_catalog	KRR1	novel	10118	10	NA	NA	1	3974	intron_retention	FALSE	canonical	1	13	junction_1	235842.9925777105	NA	4	NA	TRUE	NA	NA	NA	C	coding	381	1146	16	1161	35.0	-12	True	AATAAA	-22
PB.2767.1	chr12	-	6714	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	0	3404	0	-3404	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	25	1170	20.0	-21	True	NA	NA
PB.2915.5	chr12	-	2732	23	novel_not_in_catalog	NAA25	novel	6010	24	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	42	junction_9	66731.10721506695	NA	0	NA	TRUE	NA	NA	NA	B	coding	509	1530	24	1553	85.0	-14	True	ACTAAA	-8
PB.5294.9	chr17	-	2182	1	incomplete-splice_match	CANT1	ENST00000620915.4	3337	4	4394	1	1350	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	27	84	267	350	5.0	-155	False	AATAAA	-16
PB.5294.8	chr17	-	3052	6	novel_in_catalog	CANT1	novel	3337	4	NA	NA	2	-1	intron_retention	FALSE	canonical	1	33116	junction_1	206405.49970909205	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	284	1489	5.0	-8	False	AATAAA	-16
PB.2767.5	chr12	-	2837	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	0	7281	0	1667	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	3	NA	TRUE	NA	NA	NA	C	coding	381	1146	25	1170	15.0	-21	True	NA	NA
PB.2767.4	chr12	-	3337	10	full-splice_match	KRR1	ENST00000229214.8	10118	10	0	6781	0	2167	multi-exon	FALSE	canonical	1	466890	junction_4	146666.45658099433	NA	4	NA	TRUE	NA	NA	NA	C	coding	381	1146	25	1170	30.0	-21	True	AATAAA	-14
PB.5294.5	chr17	-	3496	6	novel_in_catalog	CANT1	novel	3337	4	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	37026	junction_5	234568.6612321433	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	459	1664	5.0	-12	False	AATAAA	-16
PB.5294.7	chr17	-	3312	5	full-splice_match	CANT1	ENST00000392446.9	3252	5	-61	1	2	-1	multi-exon	FALSE	canonical	1	254245	junction_4	147128.73567113766	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	275	1480	5.0	1	True	AATAAA	-16
PB.5294.6	chr17	-	3451	6	full-splice_match	CANT1	ENST00000591773.5	1669	6	-13	-1769	2	-1	multi-exon	FALSE	canonical	1	8329	junction_5	249034.83749387352	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	414	1619	5.0	1	True	AATAAA	-16
PB.5294.1	chr17	-	3491	4	full-splice_match	CANT1	ENST00000302345.6	3534	4	46	-3	-4	3	multi-exon	FALSE	canonical	1	254245	junction_3	155860.5905224281	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	450	1655	0.0	-8	True	AATAAA	-20
PB.5294.3	chr17	-	2658	4	novel_not_in_catalog	CANT1	novel	3337	4	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	272556.0648506815	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	112	825	5.0	1	True	AATAAA	-17
PB.5294.2	chr17	-	3356	5	novel_not_in_catalog	CANT1	novel	3337	4	NA	NA	-13	2	intron_retention	FALSE	canonical	1	1483	junction_3	241678.59915844328	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	316	1521	0.0	20	True	AATAAA	-19
PB.8840.8	chr4	+	3713	7	novel_in_catalog	CCNG2	novel	5526	8	NA	NA	26	1027	intron_retention	FALSE	canonical	1	20238	junction_1	199283.9509806854	NA	7	NA	TRUE	NA	NA	NA	C	coding	304	915	71	985	20.0	-15	True	AATAAA	-19
PB.5377.1	chr18	+	4028	18	full-splice_match	ARHGAP28	ENST00000383472.8	2295	18	-107	-1626	-107	1366	multi-exon	TRUE	canonical	1	15263	junction_1	5922.6790826087245	NA	6	NA	TRUE	NA	NA	NA	C	coding	729	2190	212	2401	25.0	-126	False	ATTAAA	-19
PB.10359.2	chr7	-	1260	5	novel_not_in_catalog	C7orf50	novel	1294	5	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	26	junction_4	415153.9792878059	NA	5	1	TRUE	NA	NA	NA	C	coding	194	585	41	625	0.0	-1	True	AATAAA	-33
PB.5377.2	chr18	+	5911	18	full-splice_match	ARHGAP28	ENST00000383472.8	2295	18	-81	-3535	-81	-10	multi-exon	FALSE	canonical	1	15263	junction_1	5922.6790826087245	NA	5	NA	TRUE	NA	NA	NA	C	coding	677	2034	342	2375	75.0	-100	False	NA	NA
PB.5406.2	chr18	+	3560	10	novel_in_catalog	SEH1L	novel	787	4	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	6074	junction_4	206097.00440865758	NA	4	NA	TRUE	NA	NA	NA	C	coding	380	1143	136	1278	15.0	-1	True	AATAAA	-30
PB.5406.3	chr18	+	1959	9	full-splice_match	SEH1L	ENST00000262124.15	3494	9	-7	1542	-7	276	multi-exon	FALSE	canonical	1	382033	junction_3	65299.128632083404	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	135	1217	15.0	0	True	GATAAA	-15
PB.5406.1	chr18	+	3599	10	novel_not_in_catalog	SEH1L	novel	787	4	NA	NA	-11	-2	any annotated donor/acceptor	FALSE	canonical	1	2108	junction_4	207699.4287763563	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	139	1317	15.0	-4	True	AATAAA	-30
PB.5406.6	chr18	+	3645	9	full-splice_match	SEH1L	ENST00000262124.15	3494	9	-2	-149	-2	149	multi-exon	FALSE	canonical	1	382033	junction_3	65299.128632083404	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	130	1212	50.0	5	True	AATAAA	-34
PB.5406.7	chr18	+	2720	8	incomplete-splice_match	SEH1L	ENST00000262124.15	3494	9	1	1822	1	-4	intron_retention	FALSE	canonical	1	382033	junction_3	69609.57956594005	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	127	1200	25.0	-79	False	AATAAA	-11
PB.5406.4	chr18	+	1677	9	full-splice_match	SEH1L	ENST00000262124.15	3494	9	-5	1822	-5	-4	multi-exon	FALSE	canonical	1	382033	junction_3	65299.128632083404	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	133	1215	25.0	2	True	AATAAA	-11
PB.5406.5	chr18	+	3475	8	novel_in_catalog	SEH1L	novel	787	4	NA	NA	-4	124	combination_of_known_junctions	FALSE	canonical	1	30987	junction_2	177278.02791165322	NA	4	NA	TRUE	NA	NA	NA	C	coding	311	936	132	1067	45.0	3	True	AATAAA	-9
PB.6641.3	chr2	-	3746	16	novel_not_in_catalog	SEMA4C	novel	3545	15	NA	NA	528	0	any annotated donor/acceptor	FALSE	canonical	1	917	junction_15	130779.33779350111	NA	0	NA	TRUE	NA	NA	NA	B	coding	833	2502	367	2868	40.0	-39	True	AATAAA	-7
PB.5406.8	chr18	+	3409	9	novel_not_in_catalog	SEH1L	novel	787	4	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	2781	junction_8	177279.30154697807	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	112	1263	15.0	0	True	AATAAA	-30
PB.5406.9	chr18	+	3328	8	novel_in_catalog	SEH1L	novel	787	4	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	30987	junction_2	177278.02791165322	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	112	1047	15.0	0	True	AATAAA	-29
PB.8840.5	chr4	+	2156	8	full-splice_match	CCNG2	ENST00000316355.9	5526	8	93	3277	19	598	multi-exon	FALSE	canonical	1	278896	junction_1	110473.54077528506	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	264	1298	25.0	1	True	ATTAAA	-24
PB.11646.9	chr9	-	4715	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	4	2	intron_retention	FALSE	canonical	1	13050	junction_16	431941.23272674694	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	2398	4251	40.0	-18	True	AATAAA	-14
PB.4101.7	chr15	+	3615	1	incomplete-splice_match	IGF1R	ENST00000650285.1	12235	21	312376	1	8120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	125	378	1709	2086	5.0	-2318	False	AATAAA	-15
PB.4101.5	chr15	+	2437	6	incomplete-splice_match	IGF1R	ENST00000558762.5	11726	21	285779	5799	10223	1438	5prime_fragment	FALSE	canonical	1	215659	junction_4	42596.77221104904	NA	1	NA	TRUE	NA	NA	NA	B	coding	367	1104	46	1149	20.0	689	False	AAAAAG	-20
PB.4101.4	chr15	+	4520	12	incomplete-splice_match	IGF1R	ENST00000558762.5	11726	21	267625	4675	184	2562	5prime_fragment	FALSE	canonical	1	54727	junction_4	71279.07309852677	NA	0	NA	TRUE	NA	NA	NA	B	coding	624	1875	234	2108	75.0	-98	False	NA	NA
PB.4101.3	chr15	+	3188	15	novel_not_in_catalog	IGF1R	novel	12235	21	NA	NA	-4	1440	any annotated donor/acceptor	FALSE	canonical	1	21771	junction_14	85119.71376031381	NA	3	NA	TRUE	NA	NA	NA	B	coding	779	2340	45	2384	25.0	-3595	False	AAAAAG	-22
PB.4101.1	chr15	+	6422	20	incomplete-splice_match	IGF1R	ENST00000268035.10	11803	21	58591	4676	-269	2562	5prime_fragment	FALSE	canonical	1	109078	junction_12	58068.26842719665	NA	0	NA	TRUE	NA	NA	NA	B	coding	1246	3741	270	4010	75.0	-8225	False	NA	NA
PB.8874.25	chr4	-	2970	3	full-splice_match	PPM1K	ENST00000514204.1	2962	3	209	-217	1	-4	multi-exon	FALSE	canonical	1	105597	junction_2	27564.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	215	763	15.0	0	True	ATTAAA	-34
PB.8840.3	chr4	+	2421	8	full-splice_match	CCNG2	ENST00000316355.9	5526	8	71	3034	-3	841	multi-exon	FALSE	canonical	1	278896	junction_1	110473.54077528506	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	286	1320	20.0	-21	True	CATAAA	-16
PB.11381.4	chr8	+	5635	3	novel_not_in_catalog	ZNF623	novel	2612	2	NA	NA	7	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_2	18448.5	NA	11	NA	TRUE	NA	NA	NA	C	coding	496	1491	222	1712	15.0	-10	True	NA	NA
PB.8874.21	chr4	-	1658	7	novel_in_catalog	PPM1K	novel	6484	7	NA	NA	3	-22	combination_of_known_junctions	FALSE	canonical	1	1506	junction_5	87561.46231156084	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	495	956	100.0	177	False	NA	NA
PB.4101.8	chr15	+	2075	1	incomplete-splice_match	IGF1R	ENST00000650285.1	12235	21	313915	2	9659	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	125	378	170	547	5.0	-779	False	AATAAA	-14
PB.6440.1	chr2	-	6138	39	novel_in_catalog	THADA	novel	6114	38	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	5461	junction_38	42192.677095331535	NA	1	NA	TRUE	NA	NA	NA	C	coding	1953	5862	180	6041	10.0	-1	True	CATAAA	-19
PB.8840.1	chr4	+	3532	7	incomplete-splice_match	CCNG2	ENST00000502280.5	1459	9	227	-846	212	846	intron_retention	FALSE	canonical	1	278896	junction_1	105760.27879031691	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	71	985	20.0	-1062	False	CATAAA	-21
PB.1761.1	chr11	+	4113	4	incomplete-splice_match	MRPL23	ENST00000397298.7	736	5	11	12	11	-12	intron_retention	FALSE	canonical	1	706464	junction_1	576406.4367604589	NA	7	NA	TRUE	NA	NA	NA	C	coding	168	507	75	581	30.0	-8738	False	AATAAA	-17
PB.1761.2	chr11	+	2455	6	full-splice_match	MRPL23	ENST00000397297.7	613	6	-2	-1840	-2	1840	multi-exon	FALSE	canonical	1	2207	junction_5	771564.9322641355	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	34	609	55.0	-2	True	AATAAA	-8
PB.808.8	chr1	+	1572	13	full-splice_match	DAP3	ENST00000368336.9	2089	13	34	483	1	1	multi-exon	FALSE	canonical	1	485792	junction_11	323979.31931833585	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	91	1287	30.0	1	True	AATAAA	-12
PB.808.2	chr1	+	1698	14	novel_in_catalog	DAP3	novel	732	2	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	31087	junction_2	484296.1202796703	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	219	1415	30.0	-34	False	AATAAA	-10
PB.808.3	chr1	+	1457	13	novel_in_catalog	DAP3	novel	732	2	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	19314	junction_5	420434.61277708906	NA	2	NA	TRUE	NA	NA	NA	C	coding	350	1053	121	1173	35.0	-29	False	AATAAA	-11
PB.808.1	chr1	+	1530	12	novel_in_catalog	DAP3	novel	732	2	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	39260	junction_7	404902.0200122698	NA	1	1	TRUE	NA	NA	NA	C	coding	371	1116	131	1246	35.0	-39	False	AATAAA	-11
PB.808.6	chr1	+	1477	12	full-splice_match	DAP3	ENST00000421487.6	1470	12	-8	1	0	-1	multi-exon	FALSE	canonical	1	72490	junction_3	404141.1496915608	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	100	1194	30.0	-8	True	AATAAA	-10
PB.2777.1	chr12	-	5511	6	incomplete-splice_match	PAWR	ENST00000328827.8	9129	7	1177	2921	110	1997	5prime_fragment	FALSE	canonical	1	363704	junction_3	71115.52658597137	NA	2	NA	TRUE	NA	NA	NA	B	coding	48	147	553	699	20.0	-6	True	AATAAA	-19
PB.808.4	chr1	+	2031	13	full-splice_match	DAP3	ENST00000368336.9	2089	13	19	39	-6	0	multi-exon	FALSE	canonical	1	485792	junction_11	323979.31931833585	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	106	1302	80.0	-14	True	NA	NA
PB.2777.3	chr12	-	3199	6	incomplete-splice_match	PAWR	ENST00000328827.8	9129	7	984	5426	-33	-508	5prime_fragment	FALSE	canonical	1	363704	junction_3	71115.52658597137	NA	1	NA	TRUE	NA	NA	NA	B	coding	244	735	158	892	45.0	1384	False	NA	NA
PB.4394.8	chr16	+	1735	6	incomplete-splice_match	FUS	ENST00000380244.7	1818	15	1	5524	1	-1167	3prime_fragment	FALSE	canonical	1	999559	junction_3	1124416.3434826797	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	76	840	65.0	1	True	NA	NA
PB.11812.4	chr9	-	3165	6	full-splice_match	FAM102A	ENST00000300434.3	3148	6	-16	-1	-16	-1	multi-exon	FALSE	canonical	1	2211	junction_5	216088.2159572798	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	517	855	5.0	10	True	AATAAA	-13
PB.4231.1	chr16	+	2633	8	incomplete-splice_match	METTL22	ENST00000163678.11	1510	10	-6	2256	2	-685	3prime_fragment	FALSE	canonical	1	48280	junction_3	92383.28298640907	NA	0	NA	TRUE	NA	NA	NA	B	coding	205	618	262	879	60.0	-13	True	NA	NA
PB.11812.2	chr9	-	4161	11	full-splice_match	FAM102A	ENST00000373095.5	4144	11	-20	3	-20	-3	multi-exon	FALSE	canonical	1	399719	junction_2	117096.88923195185	NA	2	NA	TRUE	NA	NA	NA	C	coding	384	1155	397	1551	5.0	-1	True	ATTAAA	-19
PB.9214.11	chr5	-	4482	2	incomplete-splice_match	PAIP1	ENST00000514514.5	1603	10	14	24650	-10	-4035	3prime_fragment	FALSE	canonical	1	240332	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	13	True	NA	NA
PB.9214.10	chr5	-	1627	11	full-splice_match	PAIP1	ENST00000306846.7	2782	11	227	928	201	-50	multi-exon	FALSE	canonical	1	454	junction_1	61812.32909088607	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	7	1446	45.0	-3	True	AATAAA	-18
PB.1137.15	chr1	-	1802	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	218	-19	any annotated donor/acceptor	FALSE	canonical	1	2318	junction_3	86948.64774489979	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	111	1559	70.0	1924	False	NA	NA
PB.3.3	chr1	-	1739	11	novel_not_in_catalog	FO538757.1	novel	1397	10	NA	NA	-4464	298	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	264	795	647	1441	35.0	NA	False	AATAAA	-16
PB.3.2	chr15	+	1958	10	novel_not_in_catalog	WASH3P	novel	427	3	NA	NA	0	22	intron_retention	TRUE	canonical	1	1001	junction_2	96517.45805709178	NA	1	1	TRUE	NA	NA	NA	B	coding	154	465	1	465	40.0	NA	False	AATAAA	-17
PB.3.1	chr1	-	3114	12	novel_not_in_catalog	FO538757.1	novel	1397	10	NA	NA	-4464	299	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	264	795	2021	2815	40.0	NA	False	AATAAA	-17
PB.3.6	chr1	-	2611	9	novel_not_in_catalog	FO538757.1	novel	1397	10	NA	NA	-4462	291	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	147	444	3	446	35.0	NA	False	AATAAA	-9
PB.3.5	chr1	-	2699	9	novel_not_in_catalog	FO538757.1	novel	1397	10	NA	NA	-4451	292	intron_retention	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	144	435	1	435	35.0	NA	False	AATAAA	-10
PB.3.4	chr1	-	1607	10	novel_not_in_catalog	FO538757.1	novel	1397	10	NA	NA	-4452	294	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	174	525	33	557	35.0	NA	False	AATAAA	-12
PB.3427.3	chr14	-	2155	5	novel_not_in_catalog	SAV1	novel	3034	5	NA	NA	871	462	any annotated donor/acceptor	FALSE	canonical	1	6713	junction_4	134224.9232789872	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	286	1338	90.0	1469	False	NA	NA
PB.4115.1	chr15	-	1038	9	full-splice_match	SNRPA1	ENST00000254193.10	1055	9	15	2	-14	-2	multi-exon	FALSE	canonical	1	351	junction_3	62394.23307473516	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	59	826	20.0	9	True	AATAAA	-20
PB.4115.2	chr15	-	2048	7	full-splice_match	SNRPA1	ENST00000558036.5	2108	7	62	-2	2	-2	multi-exon	FALSE	canonical	1	50377	junction_6	43415.61330424037	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	43	570	20.0	25	True	AATAAA	-20
PB.4115.3	chr15	-	2205	8	novel_in_catalog	SNRPA1	novel	1055	9	NA	NA	3	-2	intron_retention	FALSE	canonical	1	3907	junction_5	64225.99001389785	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	91	513	20.0	22	False	AATAAA	-20
PB.4115.4	chr15	-	1862	5	novel_in_catalog	SNRPA1	novel	1055	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	15171	junction_4	64909.25346734085	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	29	False	AATAAA	-20
PB.4115.5	chr15	-	1847	4	novel_in_catalog	SNRPA1	novel	1055	9	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	6020	junction_3	53518.23269586627	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-3	True	AATAAA	-20
PB.4115.6	chr15	-	2734	4	novel_not_in_catalog	SNRPA1	novel	1055	9	NA	NA	2	-183	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43581.38534588669	NA	2	1	TRUE	NA	NA	NA	C	coding	132	399	72	470	100.0	-4	True	NA	NA
PB.4115.7	chr15	-	3714	1	novel_in_catalog	SNRPA1	novel	1055	9	NA	NA	4	1305	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	76	231	70	300	85.0	-2	True	NA	NA
PB.11356.1	chr8	-	3567	19	full-splice_match	AGO2	ENST00000220592.9	14581	19	4	11010	4	255	multi-exon	FALSE	canonical	1	45207	junction_18	73689.40753897025	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	110	2689	40.0	17	True	AATATA	-18
PB.4105.28	chr15	+	2392	10	novel_in_catalog	MEF2A	novel	732	4	NA	NA	1	83	combination_of_known_junctions	FALSE	canonical	1	30270	junction_1	100740.95029564261	NA	15	1	TRUE	NA	NA	NA	C	coding	488	1467	290	1756	70.0	-1	True	NA	NA
PB.4105.29	chr15	+	3535	9	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	2	9394	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	113390.61701088576	NA	7	1	TRUE	NA	NA	NA	C	coding	229	690	641	1330	30.0	0	True	AATAAA	-25
PB.10434.22	chr7	+	1604	10	incomplete-splice_match	GPNMB	ENST00000258733.8	2862	11	212	1496	1	-313	3prime_fragment	FALSE	canonical	1	499001	junction_6	132767.28333087833	NA	1	1	TRUE	NA	NA	NA	C	coding	507	1521	84	1604	25.0	0	True	NA	NA
PB.4105.22	chr15	+	5511	12	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	2	-10	intron_retention	FALSE	canonical	1	1103	junction_1	108330.21033125166	NA	10	1	TRUE	NA	NA	NA	C	coding	488	1467	420	1886	35.0	-10	True	AATAAA	-15
PB.4105.23	chr15	+	2411	11	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	9093	junction_5	95768.68260219517	NA	3	1	TRUE	NA	NA	NA	C	coding	492	1479	380	1858	85.0	-9	True	NA	NA
PB.4105.20	chr15	+	2290	8	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	1	-18083	any annotated donor/acceptor	FALSE	canonical	1	11621	junction_7	106311.78956182016	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	300	1172	45.0	-11	True	NA	NA
PB.4105.21	chr15	+	4795	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	2	-1943	2	-237	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	381	1841	80.0	-10	True	AAGAAA	-31
PB.4105.26	chr15	+	5413	11	full-splice_match	MEF2A	ENST00000557785.5	2854	11	10	-2569	0	-55	multi-exon	FALSE	canonical	1	114418	junction_1	63587.65076490875	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	373	1833	15.0	-2	True	AAGAAA	-27
PB.4105.27	chr15	+	2832	12	novel_in_catalog	MEF2A	novel	732	4	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	10613	junction_11	86693.12617846378	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	372	1832	45.0	-1	True	AATAAA	-22
PB.4105.24	chr15	+	5267	10	novel_in_catalog	MEF2A	novel	732	4	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	5797	junction_3	86555.27041116916	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	379	1635	45.0	-8	True	AATAAA	-22
PB.4105.25	chr15	+	5337	10	novel_in_catalog	MEF2A	novel	732	4	NA	NA	-1	-56	intron_retention	FALSE	canonical	1	30270	junction_1	100740.95029564261	NA	14	1	TRUE	NA	NA	NA	C	coding	488	1467	292	1758	15.0	-3	True	AAGAAA	-26
PB.3687.19	chr14	+	2564	16	novel_in_catalog	KLC1	novel	540	3	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	72817	junction_12	520307.30998040846	NA	2	1	TRUE	NA	NA	NA	C	coding	639	1920	305	2224	25.0	-7	True	ATTAAA	-15
PB.3687.18	chr14	+	2571	15	full-splice_match	KLC1	ENST00000389744.8	3250	15	-16	695	0	11	multi-exon	FALSE	canonical	1	213833	junction_13	373900.2924221201	NA	46	4	TRUE	NA	NA	NA	C	coding	556	1671	298	1968	5.0	0	True	AATAAA	-12
PB.6481.1	chr2	+	3755	22	full-splice_match	PAPOLG	ENST00000238714.7	4263	22	12	496	-11	1	multi-exon	TRUE	canonical	1	67713	junction_5	28377.971027971664	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	238	2448	10.0	-26	True	TTTAAA	-5
PB.3687.13	chr14	+	2413	15	novel_in_catalog	KLC1	novel	540	3	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	72817	junction_12	493210.1074670491	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	312	2069	25.0	-14	True	ATTAAA	-15
PB.3687.12	chr14	+	2567	15	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	-6	19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	413960.1871609781	NA	3	1	TRUE	NA	NA	NA	C	coding	546	1641	312	1952	0.0	-14	True	AATAAA	-20
PB.3687.11	chr14	+	2315	15	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	103055	junction_13	473069.0089551213	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	313	1971	25.0	-15	True	ATTAAA	-15
PB.3687.10	chr14	+	3976	14	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	-7	-2632	any annotated donor/acceptor	FALSE	canonical	1	64	junction_13	414915.7156098376	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	313	2058	90.0	-15	True	NA	NA
PB.3687.17	chr14	+	2490	16	full-splice_match	KLC1	ENST00000452929.6	2453	16	-38	1	0	-1	multi-exon	FALSE	canonical	1	124787	junction_14	472961.67844709504	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	306	2150	25.0	-8	True	ATTAAA	-15
PB.3687.16	chr14	+	2602	16	full-splice_match	KLC1	ENST00000347839.10	2271	16	-34	-297	0	-7	multi-exon	FALSE	canonical	1	106207	junction_13	500146.9416952671	NA	2	1	TRUE	NA	NA	NA	C	coding	624	1875	306	2180	35.0	-8	True	CATAAA	-14
PB.3687.15	chr14	+	2342	15	novel_in_catalog	KLC1	novel	540	3	NA	NA	-3	-9	combination_of_known_junctions	FALSE	canonical	1	72817	junction_12	455735.0367869963	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	309	2054	50.0	-11	True	AATAAA	-29
PB.3687.14	chr14	+	2245	15	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	-6	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	413960.1871609781	NA	2	2	TRUE	NA	NA	NA	C	coding	538	1617	312	1928	50.0	-14	True	AATAAA	-29
PB.6632.11	chr2	+	1984	6	novel_in_catalog	CIAO1	novel	1533	7	NA	NA	-4	-84	intron_retention	FALSE	canonical	1	6151	junction_1	337517.08334873954	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AGTAAA	-19
PB.10442.14	chr7	-	3801	23	novel_in_catalog	OSBPL3	novel	6760	23	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	29769	junction_8	60642.95843686394	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	484	2409	25.0	-62	True	AATAAA	-13
PB.8111.12	chr3	-	2821	20	novel_in_catalog	USP4	novel	3222	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	38657	junction_1	132798.59063550193	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2508	25	2532	85.0	4	True	NA	NA
PB.4231.2	chr16	+	3015	1	novel_in_catalog	METTL22	novel	614	4	NA	NA	1	-872	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-9	True	NA	NA
PB.7802.2	chr22	+	6065	22	novel_in_catalog	TNRC6B	novel	15958	24	NA	NA	-1	403	combination_of_known_junctions	FALSE	canonical	1	16908	junction_2	46027.84400319839	NA	0	NA	TRUE	NA	NA	NA	C	coding	1690	5073	471	5543	85.0	-1	True	NA	NA
PB.8111.13	chr3	-	3190	23	novel_not_in_catalog	USP4	novel	3222	21	NA	NA	-7	-2	any annotated donor/acceptor	FALSE	canonical	1	504	junction_9	152934.74635117402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1006	3021	37	3057	90.0	-8	True	NA	NA
PB.8111.10	chr3	-	2886	21	full-splice_match	USP4	ENST00000351842.8	3222	21	-32	368	6	-29	multi-exon	FALSE	canonical	1	82756	junction_15	111562.44106064549	NA	3	NA	TRUE	NA	NA	NA	C	coding	916	2751	42	2792	50.0	5109	False	NA	NA
PB.11381.1	chr8	+	5084	3	novel_not_in_catalog	ZNF623	novel	2612	2	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	18448.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	235	1725	15.0	-23	True	NA	NA
PB.8111.11	chr3	-	2829	21	novel_in_catalog	USP4	novel	3222	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	15506	junction_11	132115.67944725562	NA	3	NA	TRUE	NA	NA	NA	C	coding	888	2667	30	2696	90.0	-1	True	NA	NA
PB.3437.8	chr14	-	1755	15	novel_not_in_catalog	ERO1A	novel	5285	16	NA	NA	39	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	240549.33347643926	NA	2	1	TRUE	NA	NA	NA	B	coding	257	774	186	959	35.0	50	True	AGTAAA	-18
PB.3437.9	chr14	-	2499	1	novel_in_catalog	ERO1A	novel	5285	16	NA	NA	0	-21206	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.3437.5	chr14	-	3190	15	novel_not_in_catalog	ERO1A	novel	5285	16	NA	NA	-51	1332	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	240549.33347643926	NA	2	1	TRUE	NA	NA	NA	B	coding	257	774	100	873	35.0	324	False	NA	NA
PB.3437.7	chr14	-	1678	15	novel_not_in_catalog	ERO1A	novel	5285	16	NA	NA	-2	58	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	240549.33347643926	NA	2	1	TRUE	NA	NA	NA	B	coding	257	774	51	824	45.0	-3	True	AGTAAA	-25
PB.10158.13	chr6	+	1878	9	full-splice_match	AMD1	ENST00000368885.7	3438	9	15	1545	0	107	multi-exon	FALSE	canonical	1	272137	junction_2	444856.59972147207	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	322	1326	40.0	0	True	ATTAAA	-15
PB.3437.1	chr14	-	5168	15	novel_not_in_catalog	ERO1A	novel	5285	16	NA	NA	-62	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	240549.33347643926	NA	4	1	TRUE	NA	NA	NA	B	coding	257	774	111	884	15.0	313	False	AATAAA	-16
PB.3437.2	chr14	-	5105	15	novel_not_in_catalog	ERO1A	novel	5285	16	NA	NA	37	-141	intron_retention	FALSE	non_canonical	0	0	junction_7	240549.33347643926	NA	2	1	TRUE	NA	NA	NA	B	coding	257	774	188	961	35.0	48	True	NA	NA
PB.8111.15	chr3	-	2297	16	novel_not_in_catalog	USP4	novel	3222	21	NA	NA	404	-2	any annotated donor/acceptor	FALSE	canonical	1	377	junction_15	138652.0081659917	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	104	2164	90.0	-8465	False	NA	NA
PB.11381.2	chr8	+	2625	2	full-splice_match	ZNF623	ENST00000526926.5	2612	2	-5	-8	-5	8	multi-exon	FALSE	canonical	1	36897	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	234	1724	15.0	-22	True	AATAAA	-24
PB.3373.19	chr14	+	7868	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	12	1724	-8	788	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	307	4812	20.0	-3	True	TATAAA	-24
PB.3373.18	chr14	+	3123	2	incomplete-splice_match	ARHGAP5	ENST00000345122.7	9604	7	12	66239	-8	2400	3prime_fragment	FALSE	canonical	1	47137	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2817	307	3123	75.0	-3	True	NA	NA
PB.3373.13	chr14	+	7256	7	full-splice_match	ARHGAP5	ENST00000539826.6	4881	7	4	-2379	4	246	multi-exon	FALSE	canonical	1	31414	junction_1	67273.6339214703	NA	2	NA	TRUE	NA	NA	NA	C	coding	1501	4506	237	4742	20.0	-29	True	AATAAA	-12
PB.3373.12	chr14	+	3940	2	incomplete-splice_match	ARHGAP5	ENST00000556611.5	4824	7	17	60640	-1	3282	3prime_fragment	FALSE	canonical	1	31414	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	1233	3699	242	3940	65.0	-34	True	AAGAAA	-13
PB.3373.11	chr14	+	6578	7	full-splice_match	ARHGAP5	ENST00000539826.6	4881	7	-6	-1691	-6	-305	multi-exon	FALSE	canonical	1	31414	junction_1	67273.6339214703	NA	5	NA	TRUE	NA	NA	NA	C	coding	1501	4506	247	4752	25.0	-39	True	ATTAAA	-20
PB.3373.10	chr14	+	2700	6	novel_in_catalog	ARHGAP5	novel	583	3	NA	NA	8	-302	intron_retention	FALSE	canonical	1	871	junction_1	79762.41876121862	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	146	871	30.0	-43	True	ATTAAA	-23
PB.3373.17	chr14	+	3205	6	full-splice_match	ARHGAP5	ENST00000433497.5	3047	6	-21	-137	-1	0	multi-exon	FALSE	canonical	1	3420	junction_1	78997.7981576702	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	212	937	30.0	-16	True	ATTAAA	-17
PB.3373.16	chr14	+	2905	5	full-splice_match	ARHGAP5	ENST00000396582.6	5786	5	212	2669	-3	-20	multi-exon	FALSE	canonical	1	2372	junction_1	88477.44860238399	NA	5	NA	TRUE	NA	NA	NA	C	coding	237	714	81	794	20.0	-18	True	ATTAAA	-26
PB.3373.15	chr14	+	3995	2	incomplete-splice_match	ARHGAP5	ENST00000345122.7	9604	7	22	65357	2	3282	3prime_fragment	FALSE	canonical	1	47137	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3699	297	3995	65.0	7	True	AAGAAA	-13
PB.3373.14	chr14	+	3048	2	incomplete-splice_match	ARHGAP5	ENST00000556611.5	4824	7	27	61522	9	2400	3prime_fragment	FALSE	canonical	1	31414	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2817	232	3048	75.0	-24	True	NA	NA
PB.2769.5	chr12	-	5878	2	full-splice_match	PHLDA1	ENST00000619060.1	5913	2	34	1	34	-1	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	401	1206	2	1207	20.0	815	False	AATAAA	-21
PB.10521.6	chr7	+	2480	5	incomplete-splice_match	YKT6	ENST00000447123.5	1085	8	-34	2534	10	1354	3prime_fragment	FALSE	canonical	1	557197	junction_1	304762.2656862025	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	159	653	30.0	-2	True	NA	NA
PB.2769.7	chr12	-	5472	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	3	842	20.0	-1	True	AATAAA	-21
PB.2769.6	chr12	-	5664	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	292	879	278	1156	20.0	-1	True	AATAAA	-21
PB.1328.9	chr10	+	2661	11	novel_not_in_catalog	COMMD3-BMI1	novel	508	5	NA	NA	7348	1525	any annotated donor/acceptor	FALSE	canonical	1	3045	junction_1	240649.59209940498	NA	2	1	TRUE	NA	NA	NA	B	coding	326	981	156	1136	15.0	4	True	ATTAAA	-16
PB.1328.8	chr10	+	2793	10	novel_in_catalog	COMMD3-BMI1	novel	508	5	NA	NA	7348	1713	no_combination_of_known_junctions	FALSE	canonical	1	18206	junction_1	194609.54267062325	NA	0	NA	TRUE	NA	NA	NA	B	coding	326	981	100	1080	50.0	4	True	AATAAA	-17
PB.2769.3	chr12	-	6148	1	novel_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	260	783	278	1060	20.0	-1	True	AATAAA	-21
PB.8268.8	chr3	+	1935	8	novel_in_catalog	TFG	novel	1289	8	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	5646	junction_1	411916.4065694665	NA	19	1	TRUE	NA	NA	NA	C	coding	396	1191	313	1503	25.0	35	True	AATAAA	-14
PB.1328.5	chr10	+	2736	10	full-splice_match	BMI1	ENST00000376663.7	3428	10	275	417	27	-417	multi-exon	FALSE	canonical	1	326091	junction_1	109978.76116823086	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	231	1211	15.0	-23	True	ATTAAA	-16
PB.1328.4	chr10	+	3334	10	full-splice_match	BMI1	ENST00000376663.7	3428	10	243	-149	-5	149	multi-exon	FALSE	canonical	1	326091	junction_1	109978.76116823086	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	263	1243	30.0	0	True	TATAAA	-36
PB.1328.7	chr10	+	3164	10	novel_in_catalog	COMMD3-BMI1	novel	508	5	NA	NA	7325	1713	no_combination_of_known_junctions	FALSE	canonical	1	32918	junction_1	190302.72374558292	NA	1	NA	TRUE	NA	NA	NA	B	coding	310	933	519	1451	50.0	-19	True	AATAAA	-17
PB.1328.6	chr10	+	2624	10	novel_in_catalog	COMMD3-BMI1	novel	508	5	NA	NA	7324	1526	no_combination_of_known_junctions	FALSE	canonical	1	18865	junction_1	194416.31452004114	NA	0	NA	TRUE	NA	NA	NA	B	coding	326	981	118	1098	10.0	-20	True	ATTAAA	-17
PB.1328.1	chr10	+	3017	10	full-splice_match	BMI1	ENST00000376663.7	3428	10	223	188	-25	-188	multi-exon	FALSE	canonical	1	326091	junction_1	109978.76116823086	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	283	1263	35.0	-4397	False	AATAAA	-18
PB.2769.8	chr12	-	5319	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	21	1	TRUE	NA	NA	NA	C	coding	228	687	3	689	20.0	-1	True	AATAAA	-21
PB.1328.3	chr10	+	2691	11	novel_not_in_catalog	COMMD3-BMI1	novel	508	5	NA	NA	3146	1523	any annotated donor/acceptor	FALSE	canonical	1	7720	junction_10	197327.34501495224	NA	0	NA	TRUE	NA	NA	NA	B	coding	265	798	270	1067	20.0	-4384	False	ATTAAA	-14
PB.1328.2	chr10	+	3053	10	full-splice_match	BMI1	ENST00000376663.7	3428	10	373	2	-1	-2	multi-exon	FALSE	canonical	1	326091	junction_1	109978.76116823086	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	133	1113	30.0	-1	True	AGTAAA	-18
PB.7928.1	chr3	-	3942	4	novel_not_in_catalog	PRRT3	novel	3368	5	NA	NA	-4	17	intron_retention	FALSE	canonical	1	2626	junction_3	36076.9529786292	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	295	3240	20.0	15	True	AATAAA	-32
PB.7928.3	chr3	-	3389	5	full-splice_match	PRRT3	ENST00000295984.7	3368	5	-22	1	-2	-1	multi-exon	FALSE	canonical	1	13592	junction_1	28377.99876995381	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	133	3078	5.0	-3	True	AATAAA	-14
PB.7928.2	chr3	-	3762	4	full-splice_match	PRRT3	ENST00000412055.5	3761	4	-2	1	-2	-1	multi-exon	FALSE	canonical	1	35307	junction_3	21038.64287976347	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	133	3078	5.0	-3	True	AATAAA	-14
PB.7928.5	chr3	-	3482	4	novel_not_in_catalog	PRRT3	novel	3368	5	NA	NA	1236	-310	any annotated donor/acceptor	FALSE	canonical	1	959	junction_3	36852.17301598374	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	162	3107	100.0	1255	False	NA	NA
PB.7928.4	chr3	-	3402	4	full-splice_match	PRRT3	ENST00000412055.5	3761	4	49	310	29	-310	multi-exon	FALSE	canonical	1	35307	junction_3	21038.64287976347	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	82	3027	100.0	48	True	NA	NA
PB.7928.7	chr3	-	1487	3	full-splice_match	PRRT3	ENST00000411976.2	1475	3	-15	3	-11	-3	multi-exon	FALSE	canonical	1	35307	junction_2	25054.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	142	1407	35.0	-12	True	AATAAA	-16
PB.7928.6	chr3	-	3325	4	full-splice_match	PRRT3	ENST00000412055.5	3761	4	-3	439	-3	-439	multi-exon	FALSE	canonical	1	35307	junction_3	21038.64287976347	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	134	3079	20.0	-4	True	NA	NA
PB.9033.29	chr4	+	5824	33	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	23387	896	any annotated donor/acceptor	FALSE	canonical	1	11847	junction_1	110365.86484449811	NA	1	NA	TRUE	NA	NA	NA	C	coding	1462	4389	405	4793	15.0	-139	False	AATAAA	-12
PB.756.4	chr1	-	2615	14	novel_in_catalog	TDRKH	novel	2217	14	NA	NA	-6	3	intron_retention	FALSE	canonical	1	24068	junction_13	43995.50572851382	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	152	1837	45.0	-41	True	AATAAA	-19
PB.756.5	chr1	-	2605	14	novel_in_catalog	TDRKH	novel	2217	14	NA	NA	-6	2	intron_retention	FALSE	canonical	1	35326	junction_1	41330.757122362185	NA	2	NA	TRUE	NA	NA	NA	C	coding	561	1686	143	1828	40.0	-7	True	AATAAA	-18
PB.4714.3	chr17	-	2367	1	novel_in_catalog	MED31	novel	1654	4	NA	NA	-29	651	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-31	True	AAGAAA	-37
PB.4714.2	chr17	-	4844	2	full-splice_match	MED31	ENST00000575519.1	620	2	-27	-4197	-27	-1397	multi-exon	FALSE	canonical	1	334552	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-29	True	NA	NA
PB.4714.1	chr17	-	4602	3	incomplete-splice_match	MED31	ENST00000225728.7	1654	4	1	2373	1	-1393	3prime_fragment	FALSE	canonical	1	241321	junction_1	46615.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	68	207	106	312	15.0	6132	False	NA	NA
PB.756.3	chr1	-	2718	13	incomplete-splice_match	TDRKH	ENST00000525790.5	2217	14	-32	3381	2	-4	3prime_fragment	FALSE	canonical	1	9022	junction_9	47746.09527162928	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	741	1754	50.0	-33	True	AATAAA	-20
PB.5838.1	chr19	-	1717	5	full-splice_match	LSM4	ENST00000593829.5	1908	5	189	2	12	-2	multi-exon	FALSE	canonical	1	1410027	junction_1	359246.4907778328	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	66	485	15.0	-10	True	AATAAA	-24
PB.10999.33	chr8	+	6445	39	novel_in_catalog	PCM1	novel	6820	39	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	35574	junction_2	241401.7898806749	NA	0	NA	TRUE	NA	NA	NA	C	coding	1969	5910	443	6352	30.0	-3	True	AATAAA	-23
PB.5838.3	chr19	-	3209	4	full-splice_match	LSM4	ENST00000594828.7	807	4	-15	-2387	-15	3	multi-exon	FALSE	canonical	1	1673096	junction_3	301469.13635543006	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	108	842	10.0	-11	True	AATAAA	-29
PB.5838.2	chr19	-	3566	5	novel_in_catalog	LSM4	novel	1908	5	NA	NA	0	3	intron_retention	FALSE	canonical	1	24838	junction_2	724339.6337323397	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	93	572	10.0	4	True	AATAAA	-29
PB.10999.36	chr8	+	6602	40	novel_in_catalog	PCM1	novel	6820	39	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	35574	junction_2	255472.44558076918	NA	3	1	TRUE	NA	NA	NA	C	coding	2025	6078	440	6517	50.0	0	True	AATAAA	-15
PB.5838.4	chr19	-	1032	5	full-splice_match	LSM4	ENST00000593829.5	1908	5	167	709	5	-23	multi-exon	FALSE	canonical	1	1410027	junction_1	359246.4907778328	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	88	507	75.0	9	True	NA	NA
PB.10999.34	chr8	+	6236	37	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	0	-157	any annotated donor/acceptor	FALSE	canonical	1	48055	junction_29	230355.94163969852	NA	10	4	TRUE	NA	NA	NA	C	coding	1982	5946	290	6235	25.0	-3	True	AATATA	-9
PB.10999.35	chr8	+	2557	15	full-splice_match	PCM1	ENST00000517730.5	2536	15	0	-21	0	21	multi-exon	FALSE	canonical	1	115325	junction_7	137807.1845435365	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2268	290	2557	65.0	-3	True	NA	NA
PB.11628.5	chr9	+	2669	23	novel_not_in_catalog	NAA35	novel	2649	23	NA	NA	90	14	any annotated donor/acceptor	FALSE	canonical	1	21662	junction_1	84985.09250426617	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	140	2317	35.0	-25	True	AATAAA	-34
PB.10999.38	chr8	+	6056	36	novel_in_catalog	PCM1	novel	6820	39	NA	NA	3	-157	combination_of_known_junctions	FALSE	canonical	1	198012	junction_23	211987.9842027363	NA	0	NA	TRUE	NA	NA	NA	C	coding	1923	5769	287	6055	25.0	0	True	AATATA	-9
PB.10999.39	chr8	+	2437	14	incomplete-splice_match	PCM1	ENST00000519253.5	6443	39	-35	67679	3	21	3prime_fragment	FALSE	canonical	1	203848	junction_6	99424.67882351829	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2151	287	2437	65.0	0	True	NA	NA
PB.6924.11	chr2	+	2442	8	full-splice_match	MOB4	ENST00000323303.8	3986	8	236	1308	-6	1112	multi-exon	FALSE	canonical	1	257019	junction_2	84749.0601308429	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	20	697	30.0	2	True	AATAAA	-30
PB.1437.2	chr10	-	2005	9	full-splice_match	SLC25A16	ENST00000609923.5	6529	9	-69	4593	-69	425	multi-exon	FALSE	canonical	1	87986	junction_8	45182.03456280356	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	169	1167	70.0	-57	False	AATAAA	-23
PB.1437.3	chr10	-	1877	9	full-splice_match	SLC25A16	ENST00000609923.5	6529	9	-51	4703	-51	315	multi-exon	FALSE	canonical	1	87986	junction_8	45182.03456280356	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	151	1149	30.0	-39	True	AATAAA	-14
PB.1437.1	chr10	-	2515	11	novel_not_in_catalog	SLC25A16	novel	6529	9	NA	NA	-39	687	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	86193.81037290323	NA	4	NA	TRUE	NA	NA	NA	C	coding	234	705	711	1415	30.0	-27	True	AAGAAA	-37
PB.1437.4	chr10	-	2052	1	genic	SLC25A16	novel	NA	NA	NA	NA	-49	-18845	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-37	True	NA	NA
PB.6816.4	chr2	-	4041	27	incomplete-splice_match	TTC21B	ENST00000243344.7	5482	29	13	7206	13	-934	3prime_fragment	FALSE	canonical	1	81817	junction_26	23686.218641991232	NA	0	NA	TRUE	NA	NA	NA	C	coding	1305	3915	126	4040	25.0	-55	True	AATAAA	-15
PB.527.2	chr1	+	2853	11	full-splice_match	GBP6	ENST00000370456.4	2987	11	-170	304	-170	-304	multi-exon	FALSE	canonical	1	17800	junction_1	4809.156766003786	NA	13	NA	TRUE	NA	NA	NA	C	coding	633	1902	264	2165	85.0	11	True	NA	NA
PB.1844.1	chr11	-	1972	4	full-splice_match	SAA2	ENST00000414546.6	1022	4	8	-958	0	958	multi-exon	FALSE	canonical	1	25657	junction_1	284523.3538827115	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	138	False	NA	NA
PB.6816.2	chr2	-	4366	29	full-splice_match	TTC21B	ENST00000243344.7	5482	29	58	1058	26	-1058	multi-exon	FALSE	canonical	1	81817	junction_28	23304.99307636758	NA	0	NA	TRUE	NA	NA	NA	C	coding	1316	3951	81	4031	50.0	-10	True	ATTAAA	-35
PB.6816.3	chr2	-	4675	28	novel_in_catalog	TTC21B	novel	1572	10	NA	NA	6	436	combination_of_known_junctions	FALSE	canonical	1	4066	junction_1	32736.635315842545	NA	1	NA	TRUE	NA	NA	NA	C	coding	1314	3945	101	4045	15.0	-30	True	AATAAA	-14
PB.1203.1	chr1	-	3324	13	incomplete-splice_match	SIPA1L2	ENST00000308942.4	2937	14	1383	-739	1383	-3	5prime_fragment	FALSE	canonical	1	80310	junction_10	28436.84099346304	NA	1	NA	TRUE	NA	NA	NA	A	coding	698	2097	72	2168	30.0	NA	False	AATAAA	-21
PB.11536.1	chr9	-	3519	13	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	-14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62445.841619569735	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	185	2353	20.0	3	True	AATAAA	-16
PB.11536.2	chr9	-	3431	13	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	24	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62445.841619569735	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	198	2366	20.0	3	True	AATAAA	-16
PB.11536.3	chr9	-	3286	13	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	62445.841619569735	NA	1	1	TRUE	NA	NA	NA	C	coding	722	2169	170	2338	20.0	0	True	AATAAA	-16
PB.9337.24	chr5	-	4094	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	10	-1	intron_retention	FALSE	canonical	1	222033	junction_1	120393.75475866217	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	923	2320	35.0	0	True	AATAAA	-30
PB.9337.25	chr5	-	3526	11	novel_not_in_catalog	MEF2C	novel	7561	11	NA	NA	80	1	any annotated donor/acceptor	FALSE	canonical	1	121	junction_6	217431.45147933406	NA	22	1	TRUE	NA	NA	NA	C	coding	284	855	896	1750	30.0	6460	False	AATAAA	-32
PB.11536.6	chr9	-	3172	12	novel_not_in_catalog	GNE	novel	5263	12	NA	NA	5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	76260.97408990064	NA	1	NA	TRUE	NA	NA	NA	C	coding	671	2016	217	2232	20.0	11	False	AATAAA	-16
PB.10906.7	chr7	-	2724	21	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	1	47139	junction_11	151360.700238627	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	134	1138	30.0	1	True	AATAAA	-23
PB.9337.28	chr5	-	3362	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-18	1	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_9	168901.72281675856	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	189	1586	30.0	-15	True	AATAAA	-32
PB.9337.29	chr5	-	3335	11	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	1	11542	junction_10	161443.13658883117	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	258	1559	30.0	13	True	AATAAA	-32
PB.8798.10	chr4	+	3966	26	full-splice_match	POLR2B	ENST00000441246.6	3839	26	27	-154	0	3	multi-exon	FALSE	canonical	1	1788	junction_1	300258.5928864651	NA	0	NA	TRUE	NA	NA	NA	C	coding	1167	3504	290	3793	15.0	0	True	AATAAA	-19
PB.81.2	chr1	-	3777	8	novel_not_in_catalog	LZIC	novel	652	5	NA	NA	71	2548	intron_retention	FALSE	canonical	0	0	junction_1	160949.34355332082	NA	10	1	TRUE	NA	NA	NA	C	coding	190	573	644	1216	35.0	1	True	AATAAA	-19
PB.1312.6	chr10	-	1817	16	novel_not_in_catalog	MINDY3	novel	2452	6	NA	NA	10	1	any annotated donor/acceptor	FALSE	canonical	1	5016	junction_1	84415.5859138715	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	212	1489	35.0	-4	True	ATTAAA	-18
PB.5801.5	chr19	-	2975	23	novel_in_catalog	EPS15L1	novel	681	2	NA	NA	2	-12	combination_of_known_junctions	FALSE	canonical	1	16404	junction_1	106157.05010872894	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	29	2293	45.0	-4	True	TATAAA	-38
PB.1312.4	chr10	-	3312	14	novel_not_in_catalog	MINDY3	novel	2452	6	NA	NA	3	-1	intron_retention	FALSE	canonical	1	3205	junction_10	73445.61273124117	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	1673	2491	20.0	-11	True	AATAAA	-19
PB.3063.14	chr13	+	3238	15	novel_in_catalog	NUP58	novel	4332	16	NA	NA	-1	823	no_combination_of_known_junctions	FALSE	canonical	1	24124	junction_13	133691.3784395285	NA	3	NA	TRUE	NA	NA	NA	C	coding	566	1701	131	1831	60.0	-8900	False	AATAGA	-17
PB.3063.13	chr13	+	6307	12	incomplete-splice_match	NUP58	ENST00000381718.7	2489	15	7	4386	-5	-8	3prime_fragment	FALSE	canonical	1	14382	junction_2	150375.3944182018	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	135	1556	55.0	15	True	AATAAA	-4
PB.1312.3	chr10	-	2247	13	novel_in_catalog	MINDY3	novel	2452	6	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	19897	junction_5	84531.16980242654	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	688	1425	20.0	-13	True	AATAAA	-20
PB.3063.11	chr13	+	2567	16	full-splice_match	NUP58	ENST00000381736.7	4332	16	104	1661	3	37	multi-exon	FALSE	canonical	1	198129	junction_7	96050.53225038486	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	147	1946	60.0	3	True	NA	NA
PB.1312.1	chr10	-	2367	15	full-splice_match	MINDY3	ENST00000277632.7	2381	15	13	1	-9	-1	multi-exon	FALSE	canonical	1	176639	junction_11	41663.678089664434	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	209	1546	20.0	-1	True	AATAAA	-19
PB.2818.6	chr12	+	2538	5	full-splice_match	ELK3	ENST00000228741.7	4205	5	6	1661	6	344	multi-exon	FALSE	canonical	1	244564	junction_1	32112.143694987102	NA	2	NA	TRUE	NA	NA	NA	C	coding	407	1224	321	1544	60.0	11	True	TTTAAA	-45
PB.2818.7	chr12	+	4183	6	novel_in_catalog	ELK3	novel	4205	5	NA	NA	-35	-11	intron_retention	FALSE	canonical	1	15316	junction_2	143785.0967437168	NA	2	NA	TRUE	NA	NA	NA	C	coding	407	1224	316	1539	25.0	0	True	AATAAA	-20
PB.2818.4	chr12	+	3683	5	full-splice_match	ELK3	ENST00000228741.7	4205	5	180	342	17	-342	multi-exon	FALSE	canonical	1	244564	junction_1	32112.143694987102	NA	6	NA	TRUE	NA	NA	NA	C	coding	407	1224	147	1370	50.0	-4597	False	NA	NA
PB.2818.5	chr12	+	3952	5	full-splice_match	ELK3	ENST00000228741.7	4205	5	240	13	8	-13	multi-exon	FALSE	canonical	1	244564	junction_1	32112.143694987102	NA	35	NA	TRUE	NA	NA	NA	C	coding	407	1224	87	1310	25.0	-4537	False	AATAAA	-18
PB.2818.2	chr12	+	2010	5	full-splice_match	ELK3	ENST00000228741.7	4205	5	196	1999	33	6	multi-exon	FALSE	canonical	1	244564	junction_1	32112.143694987102	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	131	1354	45.0	-4581	False	AATAAA	-35
PB.2818.3	chr12	+	2898	2	incomplete-splice_match	ELK3	ENST00000552142.5	1242	4	-169	41698	-6	2450	3prime_fragment	FALSE	canonical	1	244564	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.7912.4	chr3	-	2329	13	full-splice_match	RAD18	ENST00000264926.6	5886	13	42	3515	10	673	multi-exon	FALSE	canonical	1	100543	junction_12	26357.753372663738	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	76	1563	45.0	-18	True	ATTAAA	-21
PB.2818.1	chr12	+	3192	4	novel_not_in_catalog	ELK3	novel	4205	5	NA	NA	-23	-11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	138921.52426540037	NA	2	NA	TRUE	NA	NA	NA	C	coding	24	75	474	548	25.0	-4800	False	AATAAA	-20
PB.8819.1	chr4	+	3146	1	novel_in_catalog	CXCL8	novel	1705	4	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.476.10	chr1	+	4828	4	full-splice_match	FPGT	ENST00000370898.7	3254	4	42	-1616	10	1616	multi-exon	FALSE	canonical	1	90563	junction_3	18072.17177504316	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	26	1810	20.0	10	True	AATAAA	-18
PB.8819.2	chr4	+	1639	4	full-splice_match	CXCL8	ENST00000307407.7	1705	4	63	3	0	-3	multi-exon	FALSE	canonical	1	2135240	junction_3	570760.1579451351	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	91	390	20.0	0	True	NA	NA
PB.10906.1	chr7	-	2910	19	novel_not_in_catalog	EZH2	novel	3641	19	NA	NA	-4	7	any annotated donor/acceptor	FALSE	canonical	1	7246	junction_16	159348.2629182147	NA	3	NA	TRUE	NA	NA	NA	C	coding	450	1353	136	1488	30.0	-1	True	AATAAA	-25
PB.11026.10	chr8	-	4511	2	full-splice_match	BIN3	ENST00000522268.1	321	2	27	-4217	-1	-3781	multi-exon	FALSE	canonical	1	380319	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	3182	3592	85.0	-1	True	NA	NA
PB.11754.11	chr9	-	3971	7	novel_in_catalog	FBXW2	novel	2154	4	NA	NA	0	-7199	intron_retention	FALSE	canonical	1	51186	junction_5	161946.4742843724	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	484	831	15.0	-9	True	ATTAAA	-13
PB.3429.5	chr14	-	2793	20	novel_not_in_catalog	PYGL	novel	2711	20	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	241337.9803443555	NA	4	1	TRUE	NA	NA	NA	C	coding	700	2103	518	2620	40.0	-18	False	AATAAA	-19
PB.7855.16	chr22	+	4558	9	novel_not_in_catalog	NUP50	novel	5233	8	NA	NA	0	-597	any annotated donor/acceptor	FALSE	canonical	1	3187	junction_4	50826.912262199985	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1139	1795	90.0	47	False	NA	NA
PB.3429.6	chr14	-	2696	19	full-splice_match	PYGL	ENST00000544180.6	2696	19	-2	2	-2	1	multi-exon	FALSE	canonical	1	10878	junction_18	191538.94627149127	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	83	2524	35.0	-3	True	AATAAA	-18
PB.3429.1	chr14	-	5007	20	full-splice_match	PYGL	ENST00000216392.7	3048	20	253	-2212	0	2209	multi-exon	TRUE	canonical	1	482098	junction_19	116930.76836624405	NA	2	NA	TRUE	NA	NA	NA	C	coding	847	2544	81	2624	75.0	-1	True	NA	NA
PB.5801.3	chr19	-	3105	24	novel_in_catalog	EPS15L1	novel	681	2	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	1	16404	junction_1	104765.29336444933	NA	1	NA	TRUE	NA	NA	NA	C	coding	829	2490	26	2515	45.0	-1	True	TATAAA	-38
PB.3429.3	chr14	-	3095	20	full-splice_match	PYGL	ENST00000216392.7	3048	20	-47	0	-47	0	multi-exon	FALSE	canonical	1	482098	junction_19	116930.76836624405	NA	5	NA	TRUE	NA	NA	NA	C	coding	847	2544	381	2924	35.0	-301	False	AATAAA	-17
PB.3429.2	chr14	-	2696	19	novel_in_catalog	PYGL	novel	2711	20	NA	NA	2	2	no_combination_of_known_junctions	FALSE	canonical	1	4575	junction_7	187780.8004448042	NA	2	NA	TRUE	NA	NA	NA	C	coding	813	2442	79	2520	35.0	1	True	AATAAA	-22
PB.5802.2	chr19	+	2612	8	full-splice_match	C19orf44	ENST00000594035.5	2609	8	0	-3	0	3	multi-exon	FALSE	canonical	1	3836	junction_5	13799.726495367175	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	74	1951	15.0	-28	True	AGTAAA	-35
PB.10806.2	chr7	-	2579	9	novel_in_catalog	TSPAN12	novel	2798	8	NA	NA	36	-2	combination_of_known_junctions	FALSE	canonical	1	1378	junction_8	50348.34810038458	NA	0	NA	TRUE	NA	NA	NA	B	coding	171	516	794	1309	20.0	1166	False	AATAAA	-16
PB.10806.1	chr7	-	2633	9	novel_in_catalog	TSPAN12	novel	2798	8	NA	NA	371	-3	combination_of_known_junctions	FALSE	canonical	1	3856	junction_4	45349.286349814814	NA	0	NA	TRUE	NA	NA	NA	B	coding	171	516	849	1364	20.0	9	True	AATAAA	-15
PB.5801.2	chr19	-	3215	24	full-splice_match	EPS15L1	ENST00000455140.6	3266	24	39	12	2	-12	multi-exon	FALSE	canonical	1	84113	junction_1	98518.47882738167	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	29	2761	45.0	-4	True	TATAAA	-38
PB.3429.9	chr14	-	2526	20	full-splice_match	PYGL	ENST00000216392.7	3048	20	255	267	2	-267	multi-exon	FALSE	canonical	1	482098	junction_19	116930.76836624405	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2448	79	2526	50.0	1	True	AAAACA	-33
PB.3429.8	chr14	-	2667	20	full-splice_match	PYGL	ENST00000216392.7	3048	20	253	128	0	-128	multi-exon	FALSE	canonical	1	482098	junction_19	116930.76836624405	NA	2	NA	TRUE	NA	NA	NA	C	coding	847	2544	81	2624	40.0	-1	True	AAAACA	-19
PB.8277.2	chr3	+	3696	13	full-splice_match	NFKBIZ	ENST00000394054.6	3787	13	87	4	87	-4	multi-exon	FALSE	canonical	1	13328	junction_2	152833.42020880847	NA	2	NA	TRUE	NA	NA	NA	C	coding	618	1857	193	2049	30.0	0	True	AATAAA	-11
PB.10806.4	chr7	-	2370	8	novel_in_catalog	TSPAN12	novel	2798	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	1378	junction_7	36903.3983756709	NA	0	NA	TRUE	NA	NA	NA	B	coding	305	918	183	1100	20.0	-2	True	AATAAA	-16
PB.8377.2	chr3	+	3762	13	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	5704	junction_9	745058.133093891	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	1230	1742	20.0	-8251	False	AATAAA	-19
PB.8377.3	chr3	+	3341	13	novel_not_in_catalog	SEC61A1	novel	1871	12	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_12	638409.6106160289	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	153	1583	20.0	-41	True	AATAAA	-19
PB.8377.1	chr3	+	3566	12	full-splice_match	SEC61A1	ENST00000243253.7	3635	12	69	0	12	0	multi-exon	FALSE	canonical	1	954050	junction_2	459747.38898266753	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	116	1546	20.0	-4	True	AATAAA	-19
PB.8377.6	chr3	+	5432	12	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	-20	0	intron_retention	FALSE	canonical	1	47248	junction_8	646848.7629212696	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	2900	3412	20.0	-36	True	AATAAA	-19
PB.8377.7	chr3	+	5882	10	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	-18	0	intron_retention	FALSE	canonical	1	954050	junction_2	436020.3802302121	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	146	1129	20.0	-34	True	AATAAA	-19
PB.8377.4	chr3	+	1957	12	full-splice_match	SEC61A1	ENST00000243253.7	3635	12	32	1646	-25	197	multi-exon	FALSE	canonical	1	954050	junction_2	459747.38898266753	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	153	1583	40.0	-41	True	NA	NA
PB.8377.5	chr3	+	1763	12	full-splice_match	SEC61A1	ENST00000243253.7	3635	12	40	1832	-17	11	multi-exon	FALSE	canonical	1	954050	junction_2	459747.38898266753	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	145	1575	50.0	-33	True	TTTAAA	-26
PB.2963.1	chr12	-	2536	6	novel_in_catalog	C12orf43	novel	4469	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	115056	junction_5	30469.956466001062	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	14	805	15.0	-1	True	NA	NA
PB.2963.3	chr12	-	2071	6	full-splice_match	C12orf43	ENST00000288757.7	4469	6	0	2398	0	-462	multi-exon	FALSE	canonical	1	72086	junction_1	46274.2221777957	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	14	802	80.0	-1	True	NA	NA
PB.2963.2	chr12	-	2278	6	novel_in_catalog	C12orf43	novel	4469	6	NA	NA	0	-258	combination_of_known_junctions	FALSE	canonical	1	115056	junction_5	30469.956466001062	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	14	805	25.0	-1	True	AAAAAG	-21
PB.2963.5	chr12	-	1751	6	novel_in_catalog	C12orf43	novel	4469	6	NA	NA	0	584	combination_of_known_junctions	FALSE	canonical	1	115056	junction_5	30469.956466001062	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	14	805	60.0	-1	True	NA	NA
PB.2963.4	chr12	-	1923	6	novel_in_catalog	C12orf43	novel	4469	6	NA	NA	5	-623	combination_of_known_junctions	FALSE	canonical	1	115056	junction_5	30469.956466001062	NA	4	NA	TRUE	NA	NA	NA	C	coding	263	792	24	815	90.0	-11	True	NA	NA
PB.2963.6	chr12	-	1523	6	full-splice_match	C12orf43	ENST00000288757.7	4469	6	-3	2949	-3	356	multi-exon	FALSE	canonical	1	72086	junction_1	46274.2221777957	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	17	805	15.0	-4	True	AGTAAA	-18
PB.5949.10	chr19	-	1452	2	novel_in_catalog	ZNF260	novel	5666	3	NA	NA	-1	-2517	no_combination_of_known_junctions	FALSE	canonical	1	9896	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	933	519	1451	35.0	0	True	AATAAA	-20
PB.11500.8	chr9	-	2283	6	full-splice_match	B4GALT1	ENST00000379731.4	4201	6	-38	1956	-38	-1956	multi-exon	FALSE	canonical	1	481996	junction_5	211766.26480400507	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	226	1422	15.0	-1	True	NA	NA
PB.1474.11	chr10	+	4241	22	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	12125	junction_11	230252.63129515952	NA	0	NA	TRUE	NA	NA	NA	C	coding	1030	3093	85	3177	30.0	10	True	AATAAA	-15
PB.1474.10	chr10	+	4628	22	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-3	0	intron_retention	FALSE	canonical	1	490573	junction_6	179002.12549322695	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	86	2572	30.0	9	True	AATAAA	-15
PB.1474.13	chr10	+	4430	23	full-splice_match	SEC24C	ENST00000345254.8	4433	23	1	2	1	0	multi-exon	FALSE	canonical	1	490573	junction_6	177174.57352890912	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	82	3366	30.0	13	True	AATAAA	-15
PB.1474.12	chr10	+	4930	21	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	1	-1	intron_retention	FALSE	canonical	1	490573	junction_6	174474.69252401622	NA	4	NA	TRUE	NA	NA	NA	C	coding	961	2886	82	2967	25.0	13	True	AATAAA	-14
PB.1474.15	chr10	+	3613	23	full-splice_match	SEC24C	ENST00000345254.8	4433	23	13	807	-3	119	multi-exon	FALSE	canonical	1	490573	junction_6	177174.57352890912	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	70	3354	20.0	25	True	AATGAA	-14
PB.1474.14	chr10	+	4514	24	full-splice_match	SEC24C	ENST00000339365.2	4513	24	4	-5	4	5	multi-exon	FALSE	canonical	1	60491	junction_1	251215.08603907915	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	159	3443	20.0	23	True	AATAAA	-22
PB.7078.5	chr2	+	3239	17	full-splice_match	ATG16L1	ENST00000392020.8	3213	17	-34	8	0	0	multi-exon	FALSE	canonical	1	66487	junction_7	56655.996964651444	NA	4	NA	TRUE	NA	NA	NA	C	coding	588	1767	157	1923	20.0	-1	True	AATAAA	-22
PB.1474.16	chr10	+	4488	23	novel_not_in_catalog	SEC24C	novel	4668	22	NA	NA	161	5	any annotated donor/acceptor	FALSE	canonical	1	3886	junction_1	230464.59612248652	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	133	3417	20.0	189	False	AATAAA	-22
PB.11748.1	chr9	-	5679	21	novel_in_catalog	TNC	novel	7508	24	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	109624	junction_11	319303.6032784276	NA	0	NA	TRUE	NA	NA	NA	B	coding	1564	4695	363	5057	15.0	-1	True	AATAAA	-17
PB.11748.2	chr9	-	7275	27	novel_in_catalog	TNC	novel	7508	24	NA	NA	41	6	combination_of_known_junctions	FALSE	canonical	1	288317	junction_26	306872.4872824495	NA	0	NA	TRUE	NA	NA	NA	B	coding	2110	6333	314	6646	15.0	-6	True	AATAAA	-24
PB.8842.1	chr4	+	1263	9	full-splice_match	MRPL1	ENST00000315567.12	1490	9	220	7	-90	0	multi-exon	FALSE	canonical	1	305276	junction_1	43686.048226951134	NA	2	NA	TRUE	NA	NA	NA	A	coding	325	978	110	1087	20.0	0	True	AATAAA	-17
PB.12349.1	chrX	-	2633	10	novel_in_catalog	DNASE1L1	novel	2665	8	NA	NA	-8	1	intron_retention	FALSE	canonical	1	5530	junction_9	141886.7170113077	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	778	1686	45.0	1	True	AATAAA	-21
PB.10676.1	chr7	+	3868	28	full-splice_match	VPS50	ENST00000305866.9	3613	28	29	-284	0	284	multi-exon	FALSE	canonical	1	85507	junction_14	27275.541653134573	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	121	2994	30.0	3	True	AGTAAA	-22
PB.10676.2	chr7	+	3601	28	novel_in_catalog	VPS50	novel	1193	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2143	junction_2	38196.489859413094	NA	2	NA	TRUE	NA	NA	NA	C	coding	775	2328	686	3013	30.0	0	True	AATAAA	-22
PB.12349.2	chrX	-	2511	10	full-splice_match	DNASE1L1	ENST00000369809.5	3008	10	-25	522	-3	1	multi-exon	FALSE	canonical	1	48073	junction_9	133558.3097827488	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	656	1564	45.0	-15	True	AATAAA	-21
PB.10676.4	chr7	+	4359	26	novel_in_catalog	VPS50	novel	1193	12	NA	NA	1	1	intron_retention	FALSE	canonical	1	85507	junction_12	27753.4763386499	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	1443	3770	30.0	1	True	AATAAA	-23
PB.10676.5	chr7	+	3585	28	full-splice_match	VPS50	ENST00000305866.9	3613	28	27	1	1	1	multi-exon	FALSE	canonical	1	85507	junction_14	27275.541653134573	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	123	2996	30.0	1	True	AATAAA	-23
PB.5533.1	chr18	+	3670	12	incomplete-splice_match	ZNF236	ENST00000253159.12	8124	31	95792	812	-7975	-3	5prime_fragment	FALSE	canonical	1	46729	junction_10	11441.290536495255	NA	2	NA	TRUE	NA	NA	NA	B	coding	604	1815	280	2094	25.0	NA	False	NA	NA
PB.10676.7	chr7	+	5490	28	full-splice_match	VPS50	ENST00000305866.9	3613	28	27	-1904	1	32	multi-exon	FALSE	canonical	1	85507	junction_14	27275.541653134573	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	123	2996	30.0	1	True	AATAAA	-34
PB.10676.8	chr7	+	3844	29	novel_not_in_catalog	VPS50	novel	1193	12	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	10	junction_21	50820.16207843665	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	119	1273	30.0	5	True	AATAAA	-23
PB.7793.1	chr22	-	2368	7	full-splice_match	PDGFB	ENST00000331163.10	3497	7	774	355	774	-355	multi-exon	FALSE	canonical	1	55041	junction_6	23195.191767667904	NA	0	NA	TRUE	NA	NA	NA	A	coding	241	726	15	740	80.0	1004	False	TTTAAA	-36
PB.2592.11	chr12	+	3137	14	novel_in_catalog	SPATS2	novel	675	6	NA	NA	-16	16	combination_of_known_junctions	FALSE	canonical	1	18108	junction_13	114323.63187732142	NA	2	NA	TRUE	NA	NA	NA	C	coding	455	1368	449	1816	25.0	-16	True	AATAAA	-42
PB.2592.10	chr12	+	2769	13	full-splice_match	SPATS2	ENST00000321898.10	3158	13	-95	484	-4	-291	multi-exon	FALSE	canonical	1	68704	junction_1	81989.069746581	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	452	2089	55.0	2	True	ATTAAA	-5
PB.2592.13	chr12	+	3231	14	novel_in_catalog	SPATS2	novel	675	6	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	16087	junction_9	129719.57353141275	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	381	1268	25.0	-11	True	AATAAA	-26
PB.2592.12	chr12	+	2251	15	full-splice_match	SPATS2	ENST00000549412.5	2781	15	545	-15	-12	15	multi-exon	FALSE	canonical	1	16087	junction_10	130663.88619100426	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	445	1332	15.0	-12	True	AAAAAG	-33
PB.2592.15	chr12	+	2983	14	full-splice_match	SPATS2	ENST00000552918.5	2993	14	10	0	2	0	multi-exon	FALSE	canonical	1	74553	junction_1	93731.2107018422	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	375	2012	85.0	10	True	NA	NA
PB.2592.14	chr12	+	2905	14	novel_in_catalog	SPATS2	novel	675	6	NA	NA	-2	-162	combination_of_known_junctions	FALSE	canonical	1	2422	junction_1	122091.43037186729	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	459	2096	60.0	-2	True	NA	NA
PB.3358.1	chr14	+	3162	8	full-splice_match	KHNYN	ENST00000556842.5	2443	8	17	-736	14	-55	multi-exon	FALSE	canonical	1	27975	junction_1	127552.93290462367	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	58	2094	30.0	-2	True	NA	NA
PB.11345.9	chr8	+	5220	24	novel_in_catalog	EFR3A	novel	5438	23	NA	NA	-8	-435	combination_of_known_junctions	FALSE	canonical	1	6257	junction_19	159735.36275360716	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	213	2399	30.0	8	True	AATAAA	-38
PB.2852.12	chr12	+	3386	16	novel_not_in_catalog	TXNRD1	novel	3836	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_15	541861.2249920167	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	233	1726	30.0	-8	True	ATTAAA	-14
PB.2852.13	chr12	+	3940	16	novel_in_catalog	TXNRD1	novel	3836	17	NA	NA	-4	1	intron_retention	FALSE	canonical	1	39077	junction_2	727347.1764015371	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	446	2071	10.0	-4	True	ATTAAA	-21
PB.2852.10	chr12	+	3716	16	novel_not_in_catalog	TXNRD1	novel	3836	17	NA	NA	-6	0	intron_retention	FALSE	canonical	1	21375	junction_15	661573.7839996584	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	241	1707	15.0	-16	True	ATTAAA	-20
PB.2852.11	chr12	+	3723	14	incomplete-splice_match	TXNRD1	ENST00000354940.10	4082	15	340	22	0	0	intron_retention	FALSE	canonical	1	69996	junction_1	531345.9497100307	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	362	1855	15.0	-10	True	ATTAAA	-20
PB.4536.1	chr16	-	7954	18	novel_in_catalog	PHLPP2	novel	3099	15	NA	NA	-27	-1	no_combination_of_known_junctions	FALSE	canonical	1	8306	junction_14	24431.675189404297	NA	1	NA	TRUE	NA	NA	NA	C	coding	1316	3951	43	3993	30.0	-25	True	NA	NA
PB.2852.14	chr12	+	3931	16	novel_not_in_catalog	TXNRD1	novel	3836	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	21375	junction_15	715020.0506096657	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	306	1928	30.0	0	True	ATTAAA	-14
PB.2852.15	chr12	+	3515	14	incomplete-splice_match	TXNRD1	ENST00000526691.5	3974	15	2043	0	29	0	5prime_fragment	FALSE	canonical	1	1604230	junction_11	228894.97744513632	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	154	1647	15.0	-1	True	ATTAAA	-20
PB.1111.7	chr1	-	1778	7	novel_in_catalog	TMEM206	novel	2475	8	NA	NA	38	-6	no_combination_of_known_junctions	FALSE	canonical	1	8845	junction_1	74420.83563928855	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	101	1045	50.0	28	True	AATAAA	-10
PB.8251.2	chr3	+	4107	3	novel_in_catalog	CRYBG3	novel	10729	22	NA	NA	-58	-66118	intron_retention	FALSE	canonical	1	6349	junction_1	27955.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3075	1032	4106	60.0	-63	False	GATAAA	-38
PB.135.3	chr1	+	2161	8	full-splice_match	PQLC2	ENST00000375153.7	2153	8	-7	-1	-5	1	multi-exon	FALSE	canonical	1	125222	junction_7	26856.428416029303	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	648	1523	30.0	-5	True	NA	NA
PB.5984.1	chr19	+	2768	9	full-splice_match	PAK4	ENST00000358301.7	2739	9	-27	-2	5	2	multi-exon	TRUE	canonical	1	58994	junction_1	183561.43970952716	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	168	1943	5.0	-19	True	ATTAAA	-17
PB.5984.3	chr19	+	2830	10	novel_not_in_catalog	PAK4	novel	564	3	NA	NA	6	2	any annotated donor/acceptor	FALSE	canonical	1	17	junction_2	199722.7109419457	NA	2	1	TRUE	NA	NA	NA	C	coding	591	1776	230	2005	5.0	-6	True	ATTAAA	-17
PB.5984.2	chr19	+	2295	8	full-splice_match	PAK4	ENST00000599470.5	1715	8	5	-585	5	0	multi-exon	FALSE	canonical	1	21397	junction_2	234832.7552283166	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	156	1472	5.0	-7	True	ATTAAA	-15
PB.5984.5	chr19	+	2898	10	novel_in_catalog	PAK4	novel	564	3	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	20544	junction_1	194907.45337039663	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	300	2075	5.0	-30	True	ATTAAA	-15
PB.5984.4	chr19	+	2839	9	novel_in_catalog	PAK4	novel	564	3	NA	NA	-71	-1	no_combination_of_known_junctions	FALSE	canonical	1	1056	junction_1	198311.80176551364	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	243	2018	5.0	-46	False	ATTAAA	-13
PB.9562.3	chr5	-	3096	3	full-splice_match	RPS14	ENST00000519690.1	3119	3	19	4	-12	-4	multi-exon	FALSE	canonical	1	8605157	junction_1	1602684.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-12
PB.9562.2	chr5	-	2415	3	novel_in_catalog	RPS14	novel	2314	5	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	4624889	junction_2	3592818.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	837	1196	30.0	0	True	AATAAA	-13
PB.8838.6	chr4	+	5617	11	novel_in_catalog	SEPT11	novel	5593	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6987	junction_1	412206.13863594993	NA	4	NA	TRUE	NA	NA	NA	C	coding	439	1320	196	1515	5.0	-3	True	CATAAA	-32
PB.5523.1	chr18	-	5963	4	full-splice_match	CYB5A	ENST00000583418.1	5913	4	-50	0	9	0	multi-exon	FALSE	canonical	1	924927	junction_3	351510.07760612876	NA	17	NA	TRUE	NA	NA	NA	A	coding	111	336	133	468	10.0	16	False	AATATA	-16
PB.8838.4	chr4	+	2576	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	40	-1	-18	1	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	114	1391	40.0	0	True	AATAAA	-20
PB.8838.5	chr4	+	2678	11	novel_in_catalog	SEPT11	novel	5593	10	NA	NA	-11	815	combination_of_known_junctions	FALSE	canonical	1	6987	junction_1	412206.13863594993	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	235	1554	75.0	7	True	NA	NA
PB.8838.2	chr4	+	3262	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	2	-649	2	649	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	152	1429	25.0	0	True	AATAAA	-21
PB.8838.3	chr4	+	2434	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	-85	266	-37	-266	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	239	1516	10.0	-9606	False	TATAAA	-23
PB.474.11	chr1	-	4309	10	novel_in_catalog	ZRANB2	novel	3078	10	NA	NA	-25	-1	intron_retention	FALSE	canonical	1	320958	junction_2	313367.8863187428	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	42	728	25.0	-2	True	AATAAA	-16
PB.10530.8	chr7	-	3374	23	novel_not_in_catalog	MYO1G	novel	3033	21	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	2308	junction_7	224417.1516221714	NA	3	1	TRUE	NA	NA	NA	C	coding	403	1212	851	2062	0.0	14	True	AATAAA	-15
PB.10640.4	chr7	-	1807	1	novel_in_catalog	HGF	novel	5836	18	NA	NA	10289	-12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-14
PB.10640.3	chr7	-	2895	20	novel_not_in_catalog	HGF	novel	5836	18	NA	NA	-33222	5	any annotated donor/acceptor	FALSE	canonical	1	1322	junction_18	32072.43989407421	NA	1	NA	TRUE	NA	NA	NA	B	coding	728	2187	250	2436	30.0	-1	True	NA	NA
PB.10640.1	chr7	-	6052	20	novel_not_in_catalog	HGF	novel	5836	18	NA	NA	-33262	3	any annotated donor/acceptor	FALSE	canonical	1	1322	junction_18	32072.43989407421	NA	0	NA	TRUE	NA	NA	NA	B	coding	728	2187	290	2476	20.0	-41	False	NA	NA
PB.8838.9	chr4	+	5244	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	-17	366	-17	-366	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	219	1508	25.0	-9586	False	AATAAA	-23
PB.8599.4	chr3	+	2157	12	full-splice_match	CCDC50	ENST00000392455.8	8957	12	273	6527	265	-32	multi-exon	FALSE	canonical	1	36635	junction_5	346082.6071300997	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	326	1774	70.0	-71	True	NA	NA
PB.9260.7	chr5	+	3609	11	novel_in_catalog	SREK1	novel	580	5	NA	NA	-11	5	intron_retention	FALSE	canonical	1	8886	junction_8	184135.28858654443	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	82	1593	30.0	-7	True	AATAAA	-18
PB.8599.6	chr3	+	4041	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	486	-2601	486	2601	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	105	1025	35.0	0	True	ATTAAA	-13
PB.8599.7	chr3	+	3790	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	337	-2201	337	2201	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	254	1174	40.0	1	True	AATATA	-18
PB.780.33	chr1	-	6440	16	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	1	3	intron_retention	FALSE	canonical	1	8304	junction_14	407948.5218018677	NA	1	NA	TRUE	NA	NA	NA	C	coding	1187	3564	164	3727	85.0	16	True	AATATA	-11
PB.8599.1	chr3	+	1667	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	337	-78	337	78	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	254	1174	60.0	1	True	CATAAA	-8
PB.8599.2	chr3	+	7851	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	326	-6251	326	-244	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	265	1185	15.0	-10	True	AATAAA	-15
PB.8599.3	chr3	+	5000	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	336	-3410	336	-3085	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	255	1175	35.0	0	True	AATAAA	-19
PB.8636.2	chr3	-	5988	19	novel_in_catalog	RUBCN	novel	6955	21	NA	NA	-7	-603	combination_of_known_junctions	FALSE	canonical	1	38097	junction_18	39506.56144831053	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	549	2966	5.0	-19	True	AATAAA	-18
PB.8636.3	chr3	-	6033	20	novel_in_catalog	RUBCN	novel	6955	21	NA	NA	7	-614	combination_of_known_junctions	FALSE	canonical	1	38097	junction_19	47800.10110230502	NA	2	NA	TRUE	NA	NA	NA	C	coding	830	2493	530	3022	35.0	0	True	AATAAA	-7
PB.8636.1	chr3	-	6151	20	full-splice_match	RUBCN	ENST00000296343.9	2919	20	-195	-3037	-1	-588	multi-exon	FALSE	canonical	1	50496	junction_19	40364.27678095895	NA	2	NA	TRUE	NA	NA	NA	C	coding	972	2919	196	3114	30.0	-13	True	AATAAA	-33
PB.8599.8	chr3	+	1541	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	353	32	353	-32	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	238	1158	70.0	-6	True	NA	NA
PB.8599.9	chr3	+	4042	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	294	-2410	294	2410	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	297	1217	10.0	-42	True	NA	NA
PB.780.39	chr1	-	6271	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	447243.58794560964	NA	2	NA	TRUE	NA	NA	NA	C	coding	905	2718	841	3558	85.0	7	True	AATATA	-11
PB.780.38	chr1	-	6294	16	full-splice_match	ADAR	ENST00000649042.1	6263	16	-28	-3	0	3	multi-exon	FALSE	canonical	1	35589	junction_15	427734.9590854079	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	786	3581	85.0	-37	False	AATATA	-11
PB.5500.1	chr18	+	2070	4	full-splice_match	SEC11C	ENST00000509791.7	2054	4	-13	-3	-13	3	multi-exon	FALSE	canonical	1	1099685	junction_1	216471.80123414588	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	97	567	20.0	-9726	False	AATAAA	-20
PB.10408.8	chr7	+	3396	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	-2	-1268	-2	1268	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	2	NA	TRUE	NA	NA	NA	C	coding	274	825	190	1014	65.0	7	True	NA	NA
PB.5500.3	chr18	+	3555	2	novel_not_in_catalog	SEC11C	novel	1202	6	NA	NA	1	-3174	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-6	True	NA	NA
PB.5500.2	chr18	+	791	6	full-splice_match	SEC11C	ENST00000587834.5	1202	6	404	7	-3	-3	multi-exon	FALSE	canonical	1	1099685	junction_1	261802.89879724404	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	69	647	20.0	-14	True	AATAAA	-13
PB.5500.5	chr18	+	2554	5	novel_not_in_catalog	SEC11C	novel	1202	6	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	262	junction_3	690082.6558642722	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	53	385	20.0	2	True	AATAAA	-12
PB.5500.4	chr18	+	2015	7	novel_not_in_catalog	SEC11C	novel	1202	6	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	552	junction_1	743662.8645797211	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	1314	1871	20.0	-1	True	AATAAA	-13
PB.5500.6	chr18	+	3811	2	novel_not_in_catalog	SEC11C	novel	1202	6	NA	NA	4	-3006	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	8	True	NA	NA
PB.10408.1	chr7	+	1708	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	56	362	1	327	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	132	956	35.0	3	True	AATAAA	-16
PB.472.14	chr1	-	3377	12	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	2	1	no_combination_of_known_junctions	FALSE	canonical	1	3446	junction_11	66328.24900597292	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	313	1896	30.0	1	True	AATAAA	-16
PB.10408.3	chr7	+	2764	8	novel_in_catalog	TMEM106B	novel	2126	8	NA	NA	4	588	combination_of_known_junctions	FALSE	canonical	1	22861	junction_1	174489.34164291984	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	238	1062	70.0	-14	False	ATTAAA	-44
PB.10408.2	chr7	+	1867	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	72	187	4	-187	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	116	940	10.0	-14	False	AATAAA	-29
PB.10408.5	chr7	+	6213	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	86	-4173	4	4173	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	102	926	15.0	0	True	AATAAA	-17
PB.10408.4	chr7	+	3481	1	genic	TMEM106B	novel	NA	NA	NA	NA	-27	-191	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-18	True	NA	NA
PB.10408.7	chr7	+	4277	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	-5	-2146	-5	2146	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	193	1017	35.0	4	True	AATAAA	-14
PB.10408.6	chr7	+	2132	8	full-splice_match	TMEM106B	ENST00000396668.7	2126	8	-8	2	-8	-2	multi-exon	FALSE	canonical	1	193200	junction_1	123932.16292646818	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	196	1020	30.0	1	True	AATAAA	-17
PB.2589.1	chr12	+	1554	4	full-splice_match	TUBA1C	ENST00000301072.10	3001	4	174	1273	0	0	multi-exon	FALSE	canonical	1	840189	junction_3	1537381.671235076	NA	0	NA	TRUE	NA	NA	NA	A	coding	449	1350	102	1451	35.0	-1	True	AATAAA	-17
PB.6012.1	chr19	+	1820	3	novel_in_catalog	RAB4B-EGLN2	novel	482	4	NA	NA	19074	15	intron_retention	FALSE	canonical	1	4587	junction_2	215561.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	299	900	452	1351	30.0	-7973	False	AATAAA	-21
PB.6012.2	chr19	+	2082	3	novel_not_in_catalog	RAB4B-EGLN2	novel	482	4	NA	NA	19116	19074	any annotated donor/acceptor	FALSE	canonical	1	24408	junction_2	205650.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	272	819	410	1228	15.0	-9	True	AGTAAA	-10
PB.6012.3	chr19	+	1991	7	novel_not_in_catalog	RAB4B-EGLN2	novel	482	4	NA	NA	19118	20	intron_retention	FALSE	non_canonical	0	0	junction_6	360502.16335539054	NA	1	NA	TRUE	NA	NA	NA	B	coding	374	1125	408	1532	25.0	-7	True	AATAAA	-26
PB.6012.4	chr19	+	2811	7	novel_not_in_catalog	RAB4B-EGLN2	novel	482	4	NA	NA	19121	19078	intron_retention	FALSE	canonical	1	3709	junction_6	359384.9247782785	NA	0	NA	TRUE	NA	NA	NA	B	coding	374	1125	405	1529	5.0	-4	True	AGTAAA	-14
PB.6012.5	chr19	+	2103	6	full-splice_match	EGLN2	ENST00000303961.8	2102	6	5	-6	5	5	multi-exon	FALSE	canonical	1	435709	junction_1	232168.3417371111	NA	0	NA	TRUE	NA	NA	NA	A	coding	374	1125	405	1529	25.0	-4	True	AATAAA	-26
PB.9947.1	chr6	+	2153	2	novel_in_catalog	RPL10A	novel	716	6	NA	NA	-7	-4	intron_retention	FALSE	canonical	1	2544894	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	1324	1656	5.0	0	True	AATAAA	-16
PB.11211.1	chr8	-	2353	8	full-splice_match	ZFAND1	ENST00000220669.9	1798	8	-12	-543	-12	154	multi-exon	FALSE	canonical	1	273320	junction_5	107647.09118718082	NA	3	NA	TRUE	NA	NA	NA	C	coding	268	807	32	838	15.0	-13	True	NA	NA
PB.11538.8	chr9	+	2246	16	novel_in_catalog	MELK	novel	2485	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	35393	junction_3	110942.3271941878	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	190	1902	10.0	-27	True	AATAAA	-16
PB.11538.9	chr9	+	2228	16	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	133032.04353832285	NA	7	1	TRUE	NA	NA	NA	C	coding	568	1707	177	1883	10.0	-27	True	AATAAA	-17
PB.8604.1	chr3	-	2106	10	novel_in_catalog	TMEM44	novel	2490	11	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	1	3499	junction_2	38296.136335757335	NA	1	NA	TRUE	NA	NA	NA	A	coding	293	882	287	1168	25.0	51	False	AATAAA	-15
PB.11466.3	chr9	-	3391	16	full-splice_match	PSIP1	ENST00000380738.8	3364	16	-30	3	-6	-3	multi-exon	FALSE	canonical	1	122085	junction_8	403870.8799349724	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	348	1940	40.0	134	False	ATTAAA	-14
PB.11450.1	chr9	+	2630	8	novel_in_catalog	IL33	novel	2327	5	NA	NA	21	-54	combination_of_known_junctions	FALSE	canonical	1	70057	junction_1	17656.389460348633	NA	0	NA	TRUE	NA	NA	NA	B	coding	270	813	58	870	40.0	0	True	AATAAA	-24
PB.11495.1	chr9	-	4879	19	novel_in_catalog	DDX58	novel	4089	17	NA	NA	-26301	403	no_combination_of_known_junctions	TRUE	canonical	1	8048	junction_17	78995.23243929908	NA	2	NA	TRUE	NA	NA	NA	C	coding	875	2628	432	3059	15.0	-40	True	NA	NA
PB.10046.8	chr6	-	2537	7	novel_not_in_catalog	RAB23	novel	4837	7	NA	NA	14	-26	any annotated donor/acceptor	FALSE	canonical	1	3170	junction_6	93861.88533099518	NA	1	NA	TRUE	NA	NA	NA	B	coding	237	714	172	885	85.0	128	False	AGTAAA	-25
PB.11495.2	chr9	-	4627	18	full-splice_match	DDX58	ENST00000379883.2	4353	18	128	-402	12	402	multi-exon	FALSE	canonical	1	131787	junction_17	45602.26363326176	NA	1	NA	TRUE	NA	NA	NA	C	coding	925	2778	31	2808	20.0	-2	True	NA	NA
PB.11495.4	chr9	-	4456	17	novel_in_catalog	DDX58	novel	4089	17	NA	NA	12	402	no_combination_of_known_junctions	FALSE	canonical	1	3691	junction_3	76778.80501316754	NA	1	NA	TRUE	NA	NA	NA	C	coding	868	2607	31	2637	20.0	-2	True	NA	NA
PB.9258.8	chr5	+	2509	16	incomplete-splice_match	ERBIN	ENST00000511297.5	4257	25	-943	35347	-691	17222	3prime_fragment	FALSE	canonical	1	283962	junction_4	51404.19934683244	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1428	1081	2508	10.0	4	True	NA	NA
PB.10983.12	chr8	+	2994	11	novel_not_in_catalog	BLK	novel	2159	12	NA	NA	281	0	intron_retention	FALSE	canonical	1	16468	junction_6	52983.82111748831	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	1776	2504	10.0	-37	False	AATAAA	-15
PB.10983.11	chr8	+	2926	8	incomplete-splice_match	BLK	ENST00000529894.1	2017	12	51613	4519	272	3221	internal_fragment	FALSE	canonical	1	155346	junction_3	17607.34439873061	NA	3	NA	TRUE	NA	NA	NA	C	coding	310	933	140	1072	20.0	-46	False	AATAAA	-18
PB.2144.1	chr11	-	3330	17	novel_not_in_catalog	CLPB	novel	10170	17	NA	NA	-17	2869	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	90199.04220666648	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	78	2111	35.0	-24	True	NA	NA
PB.6799.30	chr2	+	3529	10	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-6	-9	combination_of_known_junctions	FALSE	canonical	1	16199	junction_7	249354.8197217059	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	160	2112	20.0	11	True	AATAAA	-17
PB.6799.31	chr2	+	3728	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	-4	264	combination_of_known_junctions	FALSE	canonical	1	36340	junction_8	258935.78336888738	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	158	2233	25.0	13	True	AATAAA	-17
PB.6799.32	chr2	+	3448	10	full-splice_match	MARCH7	ENST00000259050.8	5922	10	25	2449	1	-5	multi-exon	FALSE	canonical	1	144099	junction_1	174545.66581234994	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	98	2212	15.0	18	True	AATAAA	-21
PB.6799.33	chr2	+	3281	9	novel_in_catalog	MARCH7	novel	3303	8	NA	NA	50	-11	no_combination_of_known_junctions	FALSE	canonical	1	2481	junction_1	228848.14245040313	NA	2	NA	TRUE	NA	NA	NA	C	coding	575	1728	324	2051	25.0	2	True	AATAAA	-15
PB.1458.1	chr10	+	1212	4	full-splice_match	ANAPC16	ENST00000299381.4	3195	4	-51	2034	-3	-3	multi-exon	FALSE	canonical	1	449254	junction_1	498791.0040757441	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	170	502	25.0	-15	True	AATAAA	-18
PB.1234.25	chr1	-	2787	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-3	-181	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	122651.49111207954	NA	2	1	TRUE	NA	NA	NA	B	coding	855	2565	222	2786	45.0	34	True	AAGAAA	-9
PB.12012.1	chrX	+	1970	2	full-splice_match	MAGEB6	ENST00000379034.1	1949	2	-19	-2	-19	2	multi-exon	FALSE	canonical	1	960	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	407	1224	169	1392	20.0	NA	False	AATAAA	-27
PB.6568.4	chr2	-	2633	8	novel_in_catalog	CCDC142	novel	2309	11	NA	NA	-27	-163	no_combination_of_known_junctions	FALSE	canonical	1	3786	junction_7	22433.56716882911	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	187	2352	65.0	-26	False	NA	NA
PB.849.2	chr1	-	3870	14	full-splice_match	DCAF8	ENST00000368074.5	3824	14	-46	0	-16	0	multi-exon	FALSE	canonical	1	58706	junction_13	238553.6729915334	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	200	1993	5.0	1	True	AGTAAA	-22
PB.12344.41	chrX	-	8475	48	full-splice_match	FLNA	ENST00000369850.8	8516	48	36	5	36	-1	multi-exon	FALSE	canonical	1	315014	junction_47	1459362.1980903766	NA	6	1	TRUE	NA	NA	NA	C	coding	2647	7944	214	8157	5.0	0	True	AATAAA	-16
PB.6386.1	chr2	-	5456	6	full-splice_match	SUPT7L	ENST00000337768.9	4488	6	420	-1388	250	1388	multi-exon	FALSE	canonical	1	230450	junction_4	108694.82624301857	NA	15	NA	TRUE	NA	NA	NA	C	coding	414	1245	151	1395	40.0	434	False	NA	NA
PB.6386.2	chr2	-	4318	6	novel_not_in_catalog	SUPT7L	novel	4488	6	NA	NA	1	-4	any annotated donor/acceptor	FALSE	canonical	1	69635	junction_5	176865.40918630754	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	405	1649	40.0	185	False	ATTAAA	-21
PB.12344.42	chrX	-	8256	47	novel_not_in_catalog	FLNA	novel	8225	47	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	1054	junction_2	1476018.6849362566	NA	8	2	TRUE	NA	NA	NA	C	coding	2535	7608	54	7661	5.0	-1	True	AATAAA	-16
PB.6386.4	chr2	-	3426	5	full-splice_match	SUPT7L	ENST00000406540.5	2869	5	231	-788	230	788	multi-exon	FALSE	canonical	1	368012	junction_4	67041.04740520914	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	967	2205	40.0	-6	True	NA	NA
PB.12344.44	chrX	-	8142	46	novel_in_catalog	FLNA	novel	8225	47	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	85016	junction_16	1477252.4358577824	NA	1	NA	TRUE	NA	NA	NA	C	coding	2588	7767	58	7824	5.0	-5	True	AATAAA	-16
PB.6386.6	chr2	-	3062	6	full-splice_match	SUPT7L	ENST00000405491.5	2280	6	10	-792	10	781	multi-exon	FALSE	canonical	1	39379	junction_4	177520.79816562342	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	610	1848	40.0	-21	True	NA	NA
PB.6386.7	chr2	-	2757	6	full-splice_match	SUPT7L	ENST00000337768.9	4488	6	176	1555	6	685	multi-exon	FALSE	canonical	1	230450	junction_4	108694.82624301857	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	395	1639	30.0	-25	True	AATATA	-14
PB.6386.8	chr2	-	1965	6	full-splice_match	SUPT7L	ENST00000337768.9	4488	6	264	2259	94	-1	multi-exon	FALSE	canonical	1	230450	junction_4	108694.82624301857	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	307	1551	30.0	1	True	AATATA	-6
PB.6386.9	chr2	-	2296	6	novel_not_in_catalog	SUPT7L	novel	4488	6	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	896	junction_3	193480.4194537525	NA	1	1	TRUE	NA	NA	NA	C	coding	199	600	1276	1875	25.0	185	False	AATATA	-13
PB.10097.2	chr6	+	1100	10	incomplete-splice_match	ORC3	ENST00000392844.7	2512	20	1	46032	1	11888	3prime_fragment	FALSE	canonical	1	94990	junction_4	56014.05119507026	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1053	48	1100	55.0	-13	True	NA	NA
PB.5137.10	chr17	-	3171	7	novel_in_catalog	MKS1	novel	2397	18	NA	NA	0	-1088	intron_retention	FALSE	canonical	1	142128	junction_3	14504.717045958992	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	24	488	90.0	-1	True	NA	NA
PB.1313.13	chr10	+	2048	6	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	-3	804	any annotated donor/acceptor	FALSE	canonical	1	11659	junction_1	58534.344774328856	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	195	1244	75.0	-29	False	NA	NA
PB.1313.12	chr10	+	3729	6	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	-5	2	any annotated donor/acceptor	FALSE	canonical	1	11659	junction_1	58534.344774328856	NA	5	NA	TRUE	NA	NA	NA	C	coding	349	1050	197	1246	40.0	-31	False	AATAAA	-17
PB.1313.11	chr10	+	2913	5	full-splice_match	PTER	ENST00000535784.6	1203	5	35	-1745	-6	-736	multi-exon	FALSE	canonical	1	28493	junction_1	47029.25042194485	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	119	1168	80.0	-32	False	NA	NA
PB.1313.10	chr10	+	2485	4	novel_in_catalog	PTER	novel	1203	5	NA	NA	-8	-1025	combination_of_known_junctions	FALSE	canonical	1	13639	junction_3	46717.808196304184	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	121	1029	90.0	4	True	NA	NA
PB.1313.17	chr10	+	3763	6	full-splice_match	PTER	ENST00000378000.5	3777	6	14	0	14	0	multi-exon	FALSE	canonical	1	18176	junction_2	48065.42231833608	NA	3	NA	TRUE	NA	NA	NA	C	coding	349	1050	233	1282	35.0	-12	True	AATAAA	-15
PB.1313.16	chr10	+	1966	5	full-splice_match	PTER	ENST00000535784.6	1203	5	41	-804	0	804	multi-exon	FALSE	canonical	1	28493	junction_1	47029.25042194485	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	113	1162	75.0	-26	False	NA	NA
PB.1313.15	chr10	+	3440	6	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	0	-282	any annotated donor/acceptor	FALSE	canonical	1	11659	junction_1	58534.344774328856	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	192	1241	25.0	-26	False	NA	NA
PB.1313.14	chr10	+	3572	7	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	0	-284	any annotated donor/acceptor	FALSE	canonical	1	11743	junction_2	53798.840197122794	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	326	1375	25.0	-26	False	NA	NA
PB.5355.14	chr18	+	2307	15	novel_in_catalog	USP14	novel	1803	15	NA	NA	-6	54	combination_of_known_junctions	FALSE	canonical	1	3110	junction_5	249773.99743467072	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	542	1540	15.0	-4	True	AATAAA	-20
PB.1313.19	chr10	+	2807	7	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	26	-1023	any annotated donor/acceptor	FALSE	canonical	1	11743	junction_2	53798.840197122794	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	300	1349	80.0	0	True	NA	NA
PB.1313.18	chr10	+	2081	6	full-splice_match	PTER	ENST00000378000.5	3777	6	19	1677	19	804	multi-exon	FALSE	canonical	1	18176	junction_2	48065.42231833608	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	228	1277	75.0	-7	True	NA	NA
PB.5355.11	chr18	+	2115	15	full-splice_match	USP14	ENST00000582707.5	1803	15	174	-486	0	-120	multi-exon	FALSE	canonical	1	23265	junction_3	239576.78130875976	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	143	1522	30.0	-32	True	AATAAA	-18
PB.5355.10	chr18	+	4731	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-51	241	0	-241	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	3	1	TRUE	NA	NA	NA	C	coding	494	1485	143	1627	55.0	-32	True	TATAAA	-12
PB.5355.13	chr18	+	2833	15	full-splice_match	USP14	ENST00000582707.5	1803	15	180	-1210	2	0	multi-exon	FALSE	canonical	1	23265	junction_3	239576.78130875976	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	137	1516	85.0	-26	True	NA	NA
PB.5355.12	chr18	+	1783	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-50	3188	1	50	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	142	1626	65.0	-31	True	NA	NA
PB.10678.2	chr7	-	2950	4	full-splice_match	BET1	ENST00000222547.7	1504	4	17	-1463	-3	1463	multi-exon	FALSE	canonical	1	199191	junction_1	89355.23149144033	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	143	499	30.0	-4	True	AATAAA	-19
PB.10678.3	chr7	-	1486	4	full-splice_match	BET1	ENST00000222547.7	1504	4	15	3	1	-3	multi-exon	FALSE	canonical	1	199191	junction_1	89355.23149144033	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	145	501	15.0	-6	True	AATAAA	-19
PB.10678.1	chr7	-	3162	4	full-splice_match	BET1	ENST00000222547.7	1504	4	15	-1673	1	1673	multi-exon	FALSE	canonical	1	199191	junction_1	89355.23149144033	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	145	501	25.0	-6	True	AATAAA	-11
PB.10097.9	chr6	+	2382	2	incomplete-splice_match	ORC3	ENST00000468486.2	471	4	0	-1234	0	1234	intron_retention	FALSE	canonical	1	269415	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-5	True	NA	NA
PB.1234.23	chr1	-	2992	13	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-73	-174	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	114323.53028755596	NA	0	NA	TRUE	NA	NA	NA	B	coding	955	2865	126	2990	30.0	661	False	AAGAAA	-16
PB.10209.2	chr6	+	3154	22	full-splice_match	L3MBTL3	ENST00000533560.5	3165	22	-8	19	-2	-19	multi-exon	FALSE	canonical	1	46230	junction_1	20565.13549587551	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	179	2446	75.0	-10	True	AAAACA	-23
PB.10209.3	chr6	+	4206	23	full-splice_match	L3MBTL3	ENST00000361794.6	4217	23	-1	12	-1	0	multi-exon	FALSE	canonical	1	34780	junction_5	24339.767840659246	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	178	2520	25.0	-9	True	AATAAA	-14
PB.1142.5	chr1	+	3589	12	full-splice_match	BROX	ENST00000537020.5	3670	12	70	11	10	-11	multi-exon	FALSE	canonical	1	11802	junction_11	131113.98750642402	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	43	1059	25.0	15	True	AATAAA	-16
PB.10209.1	chr6	+	4131	22	full-splice_match	L3MBTL3	ENST00000533560.5	3165	22	-7	-959	-1	0	multi-exon	FALSE	canonical	1	46230	junction_1	20565.13549587551	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	178	2445	25.0	-9	True	AATAAA	-14
PB.10209.6	chr6	+	4160	22	novel_not_in_catalog	L3MBTL3	novel	4518	25	NA	NA	244	-1	any annotated donor/acceptor	FALSE	canonical	1	1680	junction_1	27252.92779636571	NA	1	1	TRUE	NA	NA	NA	C	coding	755	2268	198	2465	35.0	998	False	AATAAA	-23
PB.10209.7	chr6	+	3145	22	novel_not_in_catalog	L3MBTL3	novel	4518	25	NA	NA	272	-19	any annotated donor/acceptor	FALSE	canonical	1	1680	junction_1	27252.92779636571	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	170	2437	75.0	1026	False	AAAACA	-23
PB.10209.4	chr6	+	3228	23	full-splice_match	L3MBTL3	ENST00000361794.6	4217	23	-1	990	-1	-19	multi-exon	FALSE	canonical	1	34780	junction_5	24339.767840659246	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	178	2520	75.0	-9	True	AAAACA	-23
PB.10209.5	chr6	+	4266	22	novel_not_in_catalog	L3MBTL3	novel	4518	25	NA	NA	-349	-2	any annotated donor/acceptor	FALSE	canonical	1	3243	junction_1	26989.90819091823	NA	14	2	TRUE	NA	NA	NA	C	coding	755	2268	315	2582	30.0	405	False	AATAAA	-12
PB.11533.3	chr9	+	4342	6	incomplete-splice_match	RECK	ENST00000479053.1	1717	9	-22	16715	-6	-16701	3prime_fragment	FALSE	canonical	1	89097	junction_1	24664.731033603424	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	82	516	95.0	5	True	NA	NA
PB.2363.2	chr11	+	2779	7	novel_not_in_catalog	DCPS	novel	1479	6	NA	NA	308	4250	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	187510.99785471844	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	22	1035	5.0	-2	True	AATAAA	-23
PB.2363.1	chr11	+	1191	6	full-splice_match	DCPS	ENST00000263579.4	1479	6	296	-8	296	3	multi-exon	FALSE	canonical	1	385257	junction_2	67021.80636598807	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	34	1047	15.0	-14	False	AATAAA	-21
PB.7069.2	chr2	+	1658	4	novel_in_catalog	PTMA	novel	784	5	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	2259437	junction_2	369092.23057508114	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-5	True	AATAAA	-29
PB.6430.1	chr2	-	3684	1	incomplete-splice_match	SOS1	ENST00000426016.5	8517	24	135813	159	2487	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	17	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	1043	False	AATAAA	-20
PB.1577.2	chr10	+	4153	9	full-splice_match	PI4K2A	ENST00000370631.3	4189	9	32	4	32	-4	multi-exon	FALSE	canonical	1	158092	junction_1	35624.54975768115	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	26	1465	45.0	-16	True	NA	NA
PB.5580.1	chr19	+	2122	8	novel_not_in_catalog	SCAMP4	novel	2684	7	NA	NA	-7	13	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_7	186530.8132980518	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	117	806	10.0	-2899	False	AATAAA	-34
PB.7069.5	chr2	+	1944	3	incomplete-splice_match	PTMA	ENST00000409115.7	1221	5	17	6	-4	-1	intron_retention	FALSE	canonical	1	2259437	junction_2	21173.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-4	True	AATAAA	-29
PB.5580.3	chr19	+	2465	6	full-splice_match	SCAMP4	ENST00000414057.6	1477	6	10	-998	-3	1	multi-exon	FALSE	canonical	1	11816	junction_1	211754.13222981035	NA	4	NA	TRUE	NA	NA	NA	C	coding	185	558	178	735	10.0	-12	True	AATAAA	-22
PB.5580.2	chr19	+	2511	7	full-splice_match	SCAMP4	ENST00000316097.12	2684	7	174	-1	-3	1	multi-exon	FALSE	canonical	1	275352	junction_1	123556.3160795064	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	94	783	15.0	-12	True	AATAAA	-20
PB.5580.4	chr19	+	1615	2	full-splice_match	ADAT3	ENST00000329478.3	1620	2	18	-13	18	13	multi-exon	FALSE	canonical	1	18531	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	351	1056	251	1306	10.0	-4	True	AATAAA	-28
PB.8848.20	chr4	-	3328	5	novel_in_catalog	HNRNPDL	novel	3781	8	NA	NA	3	0	intron_retention	FALSE	canonical	1	4105465	junction_2	177347.37639640318	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	106	780	10.0	-1	True	AATAAA	-13
PB.8848.21	chr4	-	2162	8	incomplete-splice_match	HNRNPDL	ENST00000630114.2	1433	10	-1	880	-1	73	intron_retention	FALSE	canonical	1	467907	junction_1	1378157.1718302462	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	720	1982	15.0	3	True	ATTAAA	-12
PB.9191.4	chr5	-	7428	38	full-splice_match	RICTOR	ENST00000357387.7	9543	38	0	2115	0	-14	multi-exon	FALSE	canonical	1	80657	junction_27	32852.15758144397	NA	0	NA	TRUE	NA	NA	NA	C	coding	1708	5127	32	5158	75.0	-10	True	NA	NA
PB.9191.2	chr5	-	9529	38	full-splice_match	RICTOR	ENST00000357387.7	9543	38	10	4	1	-4	multi-exon	FALSE	canonical	1	80657	junction_27	32852.15758144397	NA	1	NA	TRUE	NA	NA	NA	C	coding	1708	5127	22	5148	25.0	0	True	AATAAA	-18
PB.2852.8	chr12	+	3478	14	novel_in_catalog	TXNRD1	novel	3836	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	189785	junction_1	502345.26786956674	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	123	1616	30.0	-8	True	ATTAAA	-14
PB.11817.7	chr9	-	2936	17	novel_in_catalog	CIZ1	novel	717	5	NA	NA	-58	0	intron_retention	FALSE	canonical	1	23207	junction_16	316039.72030910704	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	110	2806	20.0	-48	True	AATAAA	-20
PB.1234.21	chr1	-	2807	8	novel_in_catalog	CEP170	novel	6828	20	NA	NA	-124	-4	intron_retention	FALSE	canonical	1	2209	junction_3	184763.2592927766	NA	0	NA	TRUE	NA	NA	NA	B	coding	315	948	308	1255	75.0	-1287	False	AAAACA	-30
PB.1498.4	chr10	+	2040	5	full-splice_match	TMEM254	ENST00000463029.5	847	5	7	-1200	7	-1	multi-exon	FALSE	canonical	1	2297	junction_1	98676.65199529218	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-18
PB.1498.3	chr10	+	1971	4	full-splice_match	TMEM254	ENST00000467529.5	1963	4	-13	5	-13	2	multi-exon	FALSE	canonical	1	14213	junction_1	90486.97913450802	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	1	336	15.0	-23	False	AATAAA	-21
PB.1498.2	chr10	+	2038	4	full-splice_match	TMEM254	ENST00000372281.7	2042	4	-4	8	-4	-1	multi-exon	FALSE	canonical	1	137943	junction_1	33184.1664653491	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	35	406	15.0	1	True	AATAAA	-18
PB.1498.1	chr10	+	2346	4	full-splice_match	TMEM254	ENST00000372281.7	2042	4	-5	-299	-5	299	multi-exon	FALSE	canonical	1	137943	junction_1	33184.1664653491	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	36	407	30.0	0	True	GATAAA	-12
PB.4657.5	chr17	+	2174	13	full-splice_match	DPH1	ENST00000263083.10	2221	13	43	4	-6	2	multi-exon	FALSE	canonical	1	188543	junction_11	72150.25058644981	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	3	1334	10.0	0	True	AATAAA	-15
PB.1964.17	chr11	+	1605	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	38	1688	0	172	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	116	1009	50.0	0	True	NA	NA
PB.4657.7	chr17	+	2109	13	novel_not_in_catalog	DPH1	novel	2221	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	15679	junction_8	106927.091034291	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	3	1271	15.0	0	True	AATAAA	-13
PB.4657.6	chr17	+	2221	13	novel_not_in_catalog	DPH1	novel	2221	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	3784	junction_10	110467.96711575487	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	3	1901	15.0	0	True	AATAAA	-13
PB.4657.1	chr17	+	1915	6	full-splice_match	DPH1	ENST00000576129.5	991	6	-60	-864	16	864	multi-exon	FALSE	canonical	1	239465	junction_1	62979.58904724609	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	45	728	100.0	-3316	False	NA	NA
PB.4657.3	chr17	+	2901	12	incomplete-splice_match	DPH1	ENST00000263083.10	2221	13	43	6	-6	0	intron_retention	FALSE	canonical	1	188543	junction_11	70833.84856231349	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	3	1334	15.0	0	True	AATAAA	-13
PB.4657.2	chr17	+	2304	12	novel_in_catalog	DPH1	novel	2221	13	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	188543	junction_10	74803.03442589956	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	6	965	15.0	-3	True	AATAAA	-12
PB.4804.3	chr17	-	5542	13	novel_in_catalog	TOM1L2	novel	5595	14	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	6409	junction_3	76215.54447033572	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	88	1209	5.0	-4	True	AATAAA	-18
PB.4804.2	chr17	-	5745	15	full-splice_match	TOM1L2	ENST00000379504.7	2418	15	-11	-3316	2	2	multi-exon	FALSE	canonical	1	170075	junction_3	36666.41074023238	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	96	1619	10.0	-12	True	AATAAA	-19
PB.399.5	chr1	+	2540	2	full-splice_match	RNF11	ENST00000494873.1	953	2	-48	-1539	20	-354	multi-exon	FALSE	canonical	1	1687	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-9	True	CATAAA	-13
PB.6342.7	chr2	-	2913	8	novel_in_catalog	LDAH	novel	3663	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	18737	junction_1	44895.75246033406	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	68	1045	85.0	-1	True	NA	NA
PB.399.3	chr1	+	2251	3	full-splice_match	RNF11	ENST00000242719.3	3084	3	21	812	21	-812	multi-exon	FALSE	canonical	1	795200	junction_2	835.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	466	930	25.0	-8	True	AGTAAA	-20
PB.4657.8	chr17	+	2552	13	novel_not_in_catalog	DPH1	novel	2221	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	4312	junction_6	110251.46710900268	NA	1	1	TRUE	NA	NA	NA	C	coding	232	699	2	700	15.0	1	True	AATAAA	-12
PB.4804.5	chr17	-	2190	1	genic	TOM1L2	novel	NA	NA	NA	NA	-5	-76560	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	264	795	115	909	80.0	8	False	NA	NA
PB.4804.4	chr17	-	2434	15	full-splice_match	TOM1L2	ENST00000379504.7	2418	15	-17	1	-4	-1	multi-exon	FALSE	canonical	1	170075	junction_3	36666.41074023238	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	102	1625	10.0	-18	True	AATAAA	-38
PB.7817.2	chr22	+	2814	19	novel_not_in_catalog	ACO2	novel	2741	18	NA	NA	-8	-16	any annotated donor/acceptor	FALSE	canonical	1	1674	junction_15	486495.4831201632	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	31	2454	20.0	0	True	AAAACA	-14
PB.7817.3	chr22	+	2711	19	novel_not_in_catalog	ACO2	novel	2741	18	NA	NA	-8	-98	any annotated donor/acceptor	FALSE	canonical	1	747	junction_15	486574.28917999304	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2403	31	2433	15.0	0	True	NA	NA
PB.9417.6	chr5	-	2892	5	full-splice_match	ZNF608	ENST00000513986.1	2737	5	-155	0	-155	0	multi-exon	FALSE	canonical	1	27807	junction_4	22919.486518026533	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2121	772	2892	60.0	1	True	NA	NA
PB.1964.14	chr11	+	3588	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	13	-1	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	404	1297	30.0	3	True	AATAAA	-27
PB.7817.6	chr22	+	2436	9	incomplete-splice_match	ACO2	ENST00000216254.8	2741	18	-8	7445	-8	-46	3prime_fragment	FALSE	canonical	1	209990	junction_8	202787.39843737826	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	31	1233	75.0	0	True	NA	NA
PB.7817.7	chr22	+	2924	17	novel_in_catalog	ACO2	novel	2741	18	NA	NA	-4	-10	combination_of_known_junctions	FALSE	canonical	1	3043	junction_1	466499.66941614344	NA	2	1	TRUE	NA	NA	NA	C	coding	683	2052	507	2558	10.0	4	True	AAAACA	-20
PB.7817.4	chr22	+	2562	18	full-splice_match	ACO2	ENST00000216254.8	2741	18	-8	187	-8	-187	multi-exon	FALSE	canonical	1	209990	junction_8	427903.9727111599	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	31	2373	10.0	0	True	NA	NA
PB.7817.5	chr22	+	2599	17	novel_in_catalog	ACO2	novel	2741	18	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	6449	junction_1	466112.4492647561	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	174	2225	10.0	11	True	AAAACA	-28
PB.1964.13	chr11	+	2826	4	full-splice_match	MS4A1	ENST00000528313.1	928	4	-31	-1867	11	-1	multi-exon	FALSE	canonical	1	16579	junction_2	577953.7422126061	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	143	535	30.0	1	True	AATAAA	-27
PB.7817.8	chr22	+	2913	18	novel_in_catalog	ACO2	novel	2741	18	NA	NA	97	-22	no_combination_of_known_junctions	FALSE	canonical	1	9877	junction_1	454819.3436148491	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	316	2559	30.0	-27	True	AAAACA	-8
PB.10861.9	chr7	-	5060	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-6	3316	combination_of_known_junctions	FALSE	canonical	1	71194	junction_2	154895.71042120206	NA	4	NA	TRUE	NA	NA	NA	C	coding	157	474	442	915	25.0	5	True	NA	NA
PB.9417.8	chr5	-	1627	1	genic	ZNF608	novel	NA	NA	NA	NA	-3	-2528	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-5	True	NA	NA
PB.1964.12	chr11	+	2471	7	full-splice_match	MS4A1	ENST00000532073.5	2560	7	0	89	0	-89	multi-exon	FALSE	canonical	1	26330	junction_5	424672.89492714923	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	116	970	65.0	0	True	NA	NA
PB.543.8	chr1	-	3587	3	novel_in_catalog	TMED5	novel	6104	4	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	2394	junction_1	239756.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	270	587	50.0	-6	True	AATAAA	-8
PB.10861.6	chr7	-	4803	4	full-splice_match	CYREN	ENST00000393114.7	1482	4	-2	-3319	-2	3316	multi-exon	FALSE	canonical	1	71194	junction_2	150036.42546469247	NA	6	1	TRUE	NA	NA	NA	C	coding	157	474	185	658	25.0	9	True	NA	NA
PB.9223.1	chr5	-	1283	7	full-splice_match	MOCS2	ENST00000450852.7	1337	7	9	45	2	-14	multi-exon	FALSE	canonical	1	332140	junction_6	145245.22831337887	NA	1	NA	TRUE	NA	NA	NA	A	coding	188	567	228	794	70.0	-15	True	ATTAAA	-40
PB.1964.11	chr11	+	3414	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	10	-2	intron_retention	FALSE	canonical	1	6797	junction_4	473060.00455165113	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	1281	1826	40.0	0	True	AATAAA	-24
PB.2852.1	chr12	+	3597	15	full-splice_match	TXNRD1	ENST00000503506.6	3930	15	340	-7	0	1	multi-exon	FALSE	canonical	1	1022655	junction_1	310296.17823865527	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	235	1728	10.0	-10	True	ATTAAA	-21
PB.347.1	chr1	+	2303	14	novel_in_catalog	CFAP57	novel	4244	23	NA	NA	14487	-1	no_combination_of_known_junctions	FALSE	canonical	1	2518	junction_1	4510.029572581773	NA	0	NA	TRUE	NA	NA	NA	A	coding	642	1929	209	2137	15.0	-13	True	AATAAA	-14
PB.543.1	chr1	-	5804	4	full-splice_match	TMED5	ENST00000370282.7	6104	4	301	-1	-66	1	multi-exon	FALSE	canonical	1	481907	junction_3	127315.80578493256	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	186	875	25.0	-15	True	NA	NA
PB.543.2	chr1	-	5395	4	full-splice_match	TMED5	ENST00000370282.7	6104	4	290	419	-77	-419	multi-exon	FALSE	canonical	1	481907	junction_3	127315.80578493256	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	350	886	20.0	-26	True	NA	NA
PB.1964.10	chr11	+	2005	4	full-splice_match	MS4A1	ENST00000528313.1	928	4	0	-1077	0	-89	multi-exon	FALSE	canonical	1	16579	junction_2	577953.7422126061	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	112	504	65.0	4	True	NA	NA
PB.543.4	chr1	-	3474	4	full-splice_match	TMED5	ENST00000370282.7	6104	4	514	2116	47	0	multi-exon	FALSE	canonical	1	481907	junction_3	127315.80578493256	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	126	662	50.0	930	False	AATAAA	-8
PB.2373.1	chr11	-	3094	1	novel_in_catalog	ZBTB44	novel	3848	11	NA	NA	5062	533	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	6281	False	NA	NA
PB.543.7	chr1	-	3727	5	full-splice_match	TMED5	ENST00000479918.5	1296	5	-57	-2374	-57	0	multi-exon	FALSE	canonical	1	19852	junction_2	248533.56300608575	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	177	758	50.0	-6	True	AATAAA	-8
PB.10783.1	chr7	-	6288	27	novel_in_catalog	NRCAM	novel	2835	3	NA	NA	-36	-13	intron_retention	TRUE	canonical	1	71871	junction_26	65763.4457488717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1159	3480	538	4017	40.0	-49	True	ATTAAA	-26
PB.7551.14	chr21	+	3083	21	novel_not_in_catalog	PFKL	novel	2912	22	NA	NA	-7	-8	any annotated donor/acceptor	TRUE	canonical	1	1212	junction_5	650310.734525002	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	727	1818	35.0	16	True	AATAAA	-32
PB.7551.17	chr21	+	2122	16	incomplete-splice_match	PFKL	ENST00000349048.8	2912	22	13953	6	-1523	-6	5prime_fragment	FALSE	canonical	1	1028827	junction_6	321149.56090253853	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	217	1614	35.0	-9730	False	AATAAA	-34
PB.10783.2	chr7	-	6168	27	novel_in_catalog	NRCAM	novel	2835	3	NA	NA	-52	-113	intron_retention	FALSE	canonical	1	71871	junction_26	65763.4457488717	NA	1	NA	TRUE	NA	NA	NA	C	coding	1159	3480	554	4033	15.0	339	False	ATTAAA	-25
PB.7551.11	chr21	+	3610	21	novel_in_catalog	PFKL	novel	2912	22	NA	NA	3	5	intron_retention	FALSE	canonical	1	604271	junction_1	359580.16693257703	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	53	2182	35.0	-19	True	AATAAA	-45
PB.7551.10	chr21	+	2829	21	novel_in_catalog	PFKL	novel	2912	22	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	12857	junction_2	472176.42425150797	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	55	2319	30.0	-21	True	AATAAA	-36
PB.7551.13	chr21	+	2624	23	novel_not_in_catalog	PFKL	novel	2912	22	NA	NA	-1	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	457179.14881814626	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	41	2383	35.0	-7	True	AATAAA	-32
PB.7551.12	chr21	+	3149	24	novel_not_in_catalog	PFKL	novel	2912	22	NA	NA	5	-22	any annotated donor/acceptor	FALSE	canonical	1	1723	junction_2	569791.9539902627	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	384	2657	15.0	-17	True	AATAAA	-18
PB.10861.2	chr7	-	6261	4	full-splice_match	CYREN	ENST00000424142.5	1738	4	-56	-4467	21	4464	multi-exon	FALSE	canonical	1	170583	junction_3	118571.87564323825	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	660	968	40.0	-11	True	ATTAAA	-13
PB.9362.9	chr5	-	4914	31	novel_in_catalog	CHD1	novel	8095	36	NA	NA	-42	-150	combination_of_known_junctions	FALSE	canonical	1	47194	junction_1	82490.2216795017	NA	2	NA	TRUE	NA	NA	NA	C	coding	1435	4305	610	4914	80.0	7	True	TATAAA	-14
PB.9362.8	chr5	-	6194	35	novel_in_catalog	CHD1	novel	8095	36	NA	NA	-6	-10	no_combination_of_known_junctions	FALSE	canonical	1	3575	junction_30	92962.0339244295	NA	1	NA	TRUE	NA	NA	NA	C	coding	1660	4983	574	5556	5.0	-32	True	ATTAAA	-18
PB.5374.10	chr18	-	2736	4	full-splice_match	ZBTB14	ENST00000357006.8	3528	4	0	792	0	-791	multi-exon	FALSE	canonical	1	4799	junction_3	29446.213818116285	NA	4	NA	TRUE	NA	NA	NA	C	coding	443	1332	358	1689	30.0	-21	True	AATAAA	-22
PB.5374.11	chr18	-	2720	3	full-splice_match	ZBTB14	ENST00000400143.7	1814	3	140	-1046	-15	-792	multi-exon	FALSE	canonical	1	19616	junction_2	28652.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	343	1674	25.0	99	False	AATAAA	-21
PB.5374.12	chr18	-	2158	3	full-splice_match	ZBTB14	ENST00000400143.7	1814	3	171	-515	16	515	multi-exon	FALSE	canonical	1	19616	junction_2	28652.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	312	1643	35.0	-5	True	TATAAA	-18
PB.10861.3	chr7	-	6062	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	24	4464	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	461	769	40.0	7	True	ATTAAA	-13
PB.5829.1	chr19	+	2274	10	novel_in_catalog	KCNN1	novel	3625	11	NA	NA	5	261	no_combination_of_known_junctions	FALSE	canonical	1	5259	junction_1	28062.50258544353	NA	1	NA	TRUE	NA	NA	NA	A	coding	540	1623	352	1974	10.0	-93	False	AATAAA	-14
PB.6342.9	chr2	-	3409	6	full-splice_match	LDAH	ENST00000626491.2	1179	6	-18	-2212	3	-1	multi-exon	FALSE	canonical	1	12019	junction_4	54249.94577177014	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	86	919	80.0	-19	False	NA	NA
PB.5401.1	chr18	-	3262	16	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	80	0	intron_retention	TRUE	canonical	1	167367	junction_13	151471.23627693218	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	153	1643	20.0	-26	True	AATAAA	-29
PB.5401.3	chr18	-	3018	16	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	27	-1	no_combination_of_known_junctions	FALSE	canonical	1	15673	junction_2	155148.42837526766	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	206	2398	25.0	2	True	AATAAA	-28
PB.5401.2	chr18	-	3141	17	full-splice_match	AFG3L2	ENST00000269143.7	3247	17	105	1	105	-1	multi-exon	FALSE	canonical	1	167367	junction_14	155455.40699420645	NA	23	5	TRUE	NA	NA	NA	C	coding	797	2394	128	2521	25.0	-1	True	AATAAA	-28
PB.5401.5	chr18	-	2855	14	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	106	-1	combination_of_known_junctions	FALSE	canonical	1	773	junction_13	182582.99791439585	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	127	2235	25.0	0	True	AATAAA	-28
PB.5401.4	chr18	-	2997	16	novel_in_catalog	AFG3L2	novel	3247	17	NA	NA	95	-1	no_combination_of_known_junctions	FALSE	canonical	1	1490	junction_7	181281.04527165057	NA	5	2	TRUE	NA	NA	NA	C	coding	428	1287	138	1424	25.0	-11	True	AATAAA	-28
PB.5401.7	chr18	-	3123	16	novel_not_in_catalog	AFG3L2	novel	3247	17	NA	NA	74	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	177249.4161843888	NA	16	2	TRUE	NA	NA	NA	C	coding	653	1962	543	2504	25.0	-32	True	AATAAA	-27
PB.4168.1	chr16	+	2887	4	full-splice_match	TSC2	ENST00000461648.3	2793	4	-2	-92	0	-1	multi-exon	FALSE	canonical	1	164288	junction_1	60423.32174472591	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	113	832	95.0	-2	True	NA	NA
PB.4168.2	chr16	+	5433	40	full-splice_match	TSC2	ENST00000401874.7	5437	40	-3	7	0	0	multi-exon	FALSE	canonical	1	164288	junction_1	169731.33222159062	NA	0	NA	TRUE	NA	NA	NA	C	coding	1740	5223	110	5332	25.0	1	True	AATAAA	-44
PB.4168.3	chr16	+	5480	41	full-splice_match	TSC2	ENST00000642936.1	5507	41	22	5	0	0	multi-exon	FALSE	canonical	1	28834	junction_30	184135.78538642178	NA	0	NA	TRUE	NA	NA	NA	C	coding	1763	5292	88	5379	25.0	-6	True	AATAAA	-44
PB.11614.13	chr9	+	2933	16	full-splice_match	CEP78	ENST00000424347.6	11198	16	48	8217	0	-175	multi-exon	FALSE	canonical	1	89710	junction_1	36759.43836253336	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	242	2311	50.0	29	True	NA	NA
PB.11650.11	chr9	-	2919	5	full-splice_match	ZNF484	ENST00000375495.7	2867	5	-47	-5	-17	5	multi-exon	FALSE	canonical	1	21942	junction_4	18600.481786434997	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	197	2755	10.0	-18	True	AGTAAA	-21
PB.12.7	chr1	-	1966	7	novel_in_catalog	SDF4	novel	1956	7	NA	NA	-11	6	combination_of_known_junctions	FALSE	canonical	1	4501	junction_3	890201.383994359	NA	3	NA	TRUE	NA	NA	NA	C	coding	178	537	843	1379	10.0	8918	False	AATATA	-7
PB.11421.6	chr9	-	2511	15	novel_in_catalog	CBWD1	novel	1706	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	2111	junction_14	143266.91600894564	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	1514	1864	30.0	NA	False	AATAAA	-18
PB.9233.1	chr5	+	6859	20	full-splice_match	MAP3K1	ENST00000399503.3	7011	20	-24	176	-24	-176	multi-exon	TRUE	canonical	1	33044	junction_1	65972.52447228724	NA	2	NA	TRUE	NA	NA	NA	C	coding	1512	4539	25	4563	90.0	1	True	NA	NA
PB.9233.2	chr5	+	6756	21	novel_not_in_catalog	MAP3K1	novel	7011	20	NA	NA	-17	-8	any annotated donor/acceptor	TRUE	canonical	0	0	junction_20	75096.18147301166	NA	8	1	TRUE	NA	NA	NA	C	coding	1512	4539	18	4556	30.0	8	True	AATAAA	-7
PB.9233.3	chr5	+	7016	20	full-splice_match	MAP3K1	ENST00000399503.3	7011	20	-12	7	-12	-7	multi-exon	FALSE	canonical	1	33044	junction_1	65972.52447228724	NA	12	NA	TRUE	NA	NA	NA	C	coding	1512	4539	13	4551	30.0	13	True	AATAAA	-8
PB.10221.1	chr6	+	3095	7	full-splice_match	TBPL1	ENST00000237264.8	4228	7	-72	1205	-72	-1205	multi-exon	FALSE	canonical	1	227880	junction_6	100903.99088242248	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	348	908	25.0	-1008	False	AATAAA	-21
PB.10221.2	chr6	+	3602	6	novel_in_catalog	TBPL1	novel	991	5	NA	NA	-15	-15	intron_retention	FALSE	canonical	1	227880	junction_5	108088.38164872299	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	2742	3158	30.0	-951	False	AATAAA	-8
PB.10221.3	chr6	+	2031	7	full-splice_match	TBPL1	ENST00000237264.8	4228	7	26	2171	-3	762	multi-exon	FALSE	canonical	1	227880	junction_6	100903.99088242248	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	250	810	25.0	-3	True	AATAAA	-12
PB.10221.4	chr6	+	1253	7	full-splice_match	TBPL1	ENST00000237264.8	4228	7	27	2948	-2	-15	multi-exon	FALSE	canonical	1	227880	junction_6	100903.99088242248	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	249	809	30.0	-2	True	AATAAA	-8
PB.8137.1	chr3	+	1210	4	full-splice_match	CYB561D2	ENST00000232508.9	1225	4	9	6	-4	-6	multi-exon	FALSE	canonical	1	95049	junction_1	82392.28917940211	NA	0	NA	TRUE	NA	NA	NA	A	coding	222	669	223	891	60.0	-15	True	AGTAAA	-9
PB.1061.6	chr1	+	2953	16	novel_not_in_catalog	CDK18	novel	1648	16	NA	NA	-4500	0	any annotated donor/acceptor	FALSE	canonical	1	793	junction_1	67903.7677727336	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	122	1546	35.0	0	True	AATATA	-15
PB.1061.5	chr1	+	2872	1	novel_in_catalog	CDK18	novel	1648	16	NA	NA	0	-15811	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	173	522	820	1341	85.0	-2	True	NA	NA
PB.1061.4	chr1	+	3172	16	full-splice_match	CDK18	ENST00000360066.6	3141	16	-37	6	-33	2	multi-exon	FALSE	canonical	1	37724	junction_1	61219.93935471968	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	339	1763	30.0	6	True	AATATA	-17
PB.1061.3	chr1	+	3263	16	novel_in_catalog	CDK18	novel	1648	16	NA	NA	-34	2	combination_of_known_junctions	FALSE	canonical	1	35421	junction_3	71209.60337076889	NA	14	1	TRUE	NA	NA	NA	C	coding	504	1515	340	1854	30.0	5	True	AATATA	-17
PB.9033.19	chr4	+	3109	24	novel_in_catalog	TMEM131L	novel	5017	35	NA	NA	12	548	no_combination_of_known_junctions	FALSE	canonical	1	4244	junction_7	82681.3277227237	NA	2	NA	TRUE	NA	NA	NA	C	coding	1024	3072	38	3109	60.0	1	True	CATAAA	-32
PB.1061.1	chr1	+	3127	16	full-splice_match	CDK18	ENST00000429964.6	1648	16	-65	-1414	-65	-1	multi-exon	FALSE	canonical	1	47772	junction_1	59518.408129996955	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	289	1713	30.0	-7787	False	AATATA	-22
PB.11614.12	chr9	+	2524	15	full-splice_match	CEP78	ENST00000277082.9	2542	15	-127	145	0	-9	multi-exon	FALSE	canonical	1	89710	junction_1	34214.556705160045	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	247	2364	40.0	24	True	AATAAA	-14
PB.11650.10	chr9	-	3943	5	full-splice_match	ZNF484	ENST00000375495.7	2867	5	-33	-1043	-3	5	multi-exon	FALSE	canonical	1	21942	junction_4	18600.481786434997	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	183	2741	35.0	-4	True	NA	NA
PB.504.13	chr1	-	2979	14	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	213	junction_5	30590.32540240218	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	242	1879	25.0	-5	True	AATAAA	-17
PB.8104.1	chr3	-	2083	12	novel_in_catalog	IMPDH2	novel	469	3	NA	NA	-3	-6	intron_retention	FALSE	canonical	1	2540165	junction_11	352985.7100870883	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	788	2035	50.0	-4	True	AATAAA	-8
PB.10792.9	chr7	-	2717	5	full-splice_match	TMEM168	ENST00000312814.10	7470	5	193	4560	-6	143	multi-exon	FALSE	canonical	1	114699	junction_3	53424.33458347891	NA	23	NA	TRUE	NA	NA	NA	C	coding	681	2046	417	2462	15.0	-7	True	NA	NA
PB.10792.8	chr7	-	3023	5	full-splice_match	TMEM168	ENST00000312814.10	7470	5	175	4272	6	431	multi-exon	FALSE	canonical	1	114699	junction_3	53424.33458347891	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	435	2480	15.0	297	False	AATAAA	-27
PB.10792.7	chr7	-	3265	5	full-splice_match	TMEM168	ENST00000312814.10	7470	5	191	4014	-8	689	multi-exon	FALSE	canonical	1	114699	junction_3	53424.33458347891	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	419	2464	50.0	-9	True	AATAAA	-28
PB.10792.6	chr7	-	2652	4	full-splice_match	TMEM168	ENST00000447395.5	1291	4	31	-1392	1	1341	multi-exon	FALSE	canonical	1	4564	junction_3	103230.8643263029	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	288	1199	40.0	0	True	AATAAA	-6
PB.10792.4	chr7	-	3289	6	novel_not_in_catalog	TMEM168	novel	7470	5	NA	NA	-7	1344	any annotated donor/acceptor	FALSE	canonical	1	2194	junction_4	82377.62515877718	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	418	1833	45.0	-8	True	AATAAA	-9
PB.10792.3	chr7	-	3637	4	novel_in_catalog	TMEM168	novel	7470	5	NA	NA	0	1344	intron_retention	FALSE	canonical	1	4557	junction_1	53031.92449836231	NA	9	NA	TRUE	NA	NA	NA	C	coding	414	1245	411	1655	45.0	-1	True	AATAAA	-9
PB.10792.2	chr7	-	3914	5	full-splice_match	TMEM168	ENST00000312814.10	7470	5	197	3359	-2	1344	multi-exon	FALSE	canonical	1	114699	junction_3	53424.33458347891	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	413	2458	45.0	-3	True	AATAAA	-9
PB.10792.1	chr7	-	4021	6	full-splice_match	TMEM168	ENST00000454074.5	2659	6	-18	-1344	12	1344	multi-exon	FALSE	canonical	1	5904	junction_5	97061.75416630384	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	520	2565	45.0	303	False	AATAAA	-9
PB.11712.12	chr9	+	4288	2	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	268220	-6	no_combination_of_known_junctions	FALSE	canonical	1	538	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	32	99	248	346	30.0	-8726	False	ATTAAA	-22
PB.9106.6	chr4	-	2010	8	novel_in_catalog	TRIML2	novel	1639	7	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	1	11411	junction_7	15704.713047947336	NA	1	NA	TRUE	NA	NA	NA	B	coding	437	1314	581	1894	30.0	-1	True	AATAAA	-29
PB.8198.5	chr3	+	2797	9	novel_not_in_catalog	ABHD6	novel	2482	10	NA	NA	-45	-288	intron_retention	FALSE	canonical	1	31117	junction_8	53089.40898851672	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	141	1157	30.0	-2	True	AATAAA	-29
PB.8198.4	chr3	+	2131	9	full-splice_match	ABHD6	ENST00000295962.8	2393	9	264	-2	-51	2	multi-exon	FALSE	canonical	1	31438	junction_1	41615.14119584361	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	147	1160	10.0	-8	True	AATAAA	-25
PB.4824.1	chr17	-	2914	7	novel_in_catalog	AC124066.1	novel	1660	2	NA	NA	-26512	-1069	no_combination_of_known_junctions	TRUE	canonical	1	9040	junction_1	90976.53128447774	NA	1	NA	TRUE	NA	NA	NA	A	coding	155	468	104	571	40.0	-62	True	AATAAA	-19
PB.8198.3	chr3	+	1972	10	full-splice_match	ABHD6	ENST00000478253.5	2482	10	288	222	-53	-222	multi-exon	FALSE	canonical	1	27419	junction_1	48715.58548007677	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	214	1227	35.0	-10	True	AATAAA	-13
PB.8198.2	chr3	+	2870	10	novel_not_in_catalog	ABHD6	novel	2482	10	NA	NA	-53	-288	intron_retention	FALSE	canonical	1	27419	junction_1	55744.10512620135	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	214	1230	30.0	-10	True	AATAAA	-29
PB.5006.10	chr17	+	3157	11	full-splice_match	PSME3	ENST00000590720.5	998	11	20	-2179	0	0	multi-exon	FALSE	canonical	1	1009540	junction_2	150529.1262753159	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	214	978	15.0	1	True	AATAAA	-22
PB.5006.11	chr17	+	2626	11	full-splice_match	PSME3	ENST00000590720.5	998	11	41	-1669	3	8	multi-exon	FALSE	canonical	1	1009540	junction_2	150529.1262753159	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	193	957	20.0	22	True	ATTAAA	-34
PB.5006.12	chr17	+	2912	11	novel_in_catalog	PSME3	novel	3082	13	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	1	14431	junction_1	410594.2639565366	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	663	1244	20.0	1	True	ATTAAA	-33
PB.5006.13	chr17	+	2725	12	novel_not_in_catalog	PSME3	novel	3082	13	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	51	junction_5	517439.2875619434	NA	27	NA	TRUE	NA	NA	NA	C	coding	151	456	609	1064	25.0	10	True	ATTAAA	-26
PB.11712.13	chr9	+	6822	4	full-splice_match	AKAP2	ENST00000259318.7	3101	4	-25	-3696	-25	-5	multi-exon	FALSE	canonical	1	30860	junction_1	158268.51259173444	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	233	2812	30.0	-2120	False	ATTAAA	-23
PB.11538.11	chr9	+	2430	18	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	13	0	any annotated donor/acceptor	FALSE	canonical	1	25855	junction_1	124555.12377834742	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	254	2086	10.0	-21	True	AATAAA	-16
PB.1173.2	chr1	+	2008	5	novel_in_catalog	SNAP47	novel	2375	3	NA	NA	19	0	no_combination_of_known_junctions	FALSE	canonical	1	2397	junction_1	187267.78263358597	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	196	1455	20.0	2	True	AATAAA	-18
PB.4480.13	chr16	+	2370	2	incomplete-splice_match	CBFB	ENST00000290858.10	3136	6	53167	5	229	-5	5prime_fragment	FALSE	canonical	1	433279	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2774	False	AATAAA	-13
PB.11500.9	chr9	-	2192	1	novel_in_catalog	B4GALT1	novel	1535	3	NA	NA	170	-54358	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	180	543	18	560	95.0	10	True	NA	NA
PB.4480.10	chr16	+	2954	5	novel_in_catalog	CBFB	novel	584	6	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	26586	junction_2	263291.42621378216	NA	2	NA	TRUE	NA	NA	NA	C	coding	148	447	233	679	30.0	27	True	AATAAA	-13
PB.11524.1	chr9	+	2364	6	novel_not_in_catalog	CCDC107	novel	1173	6	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	22410	junction_2	194446.96842316672	NA	0	NA	TRUE	NA	NA	NA	B	coding	129	387	1976	2362	10.0	-55	True	ACTAAA	-19
PB.10121.9	chr6	-	2480	10	full-splice_match	FBXL4	ENST00000369244.6	8035	10	-12	5567	-12	-380	multi-exon	FALSE	canonical	1	33036	junction_9	42573.852541462846	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	664	2307	45.0	6	True	ATTAAA	-29
PB.10121.8	chr6	-	2426	8	novel_in_catalog	FBXL4	novel	8035	10	NA	NA	29	-283	no_combination_of_known_junctions	FALSE	canonical	1	19296	junction_2	58341.09550824394	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	453	2156	60.0	-33	True	NA	NA
PB.11605.5	chr9	-	1825	13	full-splice_match	ALDH1A1	ENST00000297785.7	2107	13	-48	330	-47	-330	multi-exon	FALSE	canonical	1	1404990	junction_8	207564.3844141934	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	104	1609	70.0	239	False	NA	NA
PB.10121.3	chr6	-	2236	8	novel_in_catalog	FBXL4	novel	8035	10	NA	NA	20	-208	no_combination_of_known_junctions	FALSE	canonical	1	20749	junction_7	60519.1113916311	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	1220	1891	55.0	-42	True	AATAAA	-20
PB.10121.2	chr6	-	3673	9	novel_in_catalog	FBXL4	novel	8035	10	NA	NA	20	-208	intron_retention	FALSE	canonical	1	33036	junction_8	45145.52793588059	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	712	2343	55.0	-42	True	AATAAA	-20
PB.10121.1	chr6	-	4274	11	novel_not_in_catalog	FBXL4	novel	8035	10	NA	NA	30	-1139	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	54326.480810006455	NA	5	NA	TRUE	NA	NA	NA	C	coding	547	1644	622	2265	25.0	48	False	AGTAAA	-18
PB.10121.7	chr6	-	2311	9	novel_in_catalog	FBXL4	novel	8035	10	NA	NA	-19	-210	no_combination_of_known_junctions	FALSE	canonical	1	24751	junction_5	55189.219165606744	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	1297	1968	60.0	-1	True	AATAAA	-18
PB.10121.6	chr6	-	2557	9	full-splice_match	FBXL4	ENST00000229971.2	2810	9	44	209	-36	-209	multi-exon	FALSE	canonical	1	20749	junction_8	46265.474723160194	NA	1	1	TRUE	NA	NA	NA	C	coding	591	1776	438	2213	60.0	-18	True	AATAAA	-19
PB.10121.5	chr6	-	2587	9	novel_in_catalog	FBXL4	novel	8035	10	NA	NA	-20	-209	no_combination_of_known_junctions	FALSE	canonical	1	19296	junction_2	52836.81238123071	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	672	2243	60.0	-2	True	AATAAA	-19
PB.10121.4	chr6	-	2584	10	full-splice_match	FBXL4	ENST00000369244.6	8035	10	55	5396	55	-209	multi-exon	FALSE	canonical	1	33036	junction_9	42573.852541462846	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	597	2240	60.0	-1	True	AATAAA	-19
PB.11524.2	chr9	+	2417	5	novel_not_in_catalog	CCDC107	novel	1173	6	NA	NA	7	4	intron_retention	FALSE	canonical	1	22410	junction_2	203353.40152229444	NA	0	NA	TRUE	NA	NA	NA	B	coding	155	465	1953	2417	15.0	-32	True	ACTAAA	-14
PB.8242.17	chr3	+	5166	8	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-12	-1155	no_combination_of_known_junctions	FALSE	canonical	1	8369	junction_3	26551.633207770854	NA	3	NA	TRUE	NA	NA	NA	C	coding	916	2751	559	3309	25.0	-4	True	AATAAA	-19
PB.11450.2	chr9	+	2561	8	novel_in_catalog	IL33	novel	2327	5	NA	NA	21	-123	combination_of_known_junctions	FALSE	canonical	1	70057	junction_1	17656.389460348633	NA	0	NA	TRUE	NA	NA	NA	B	coding	270	813	58	870	45.0	0	True	AATAAA	-19
PB.6903.1	chr2	-	2427	14	full-splice_match	HIBCH	ENST00000359678.9	1939	14	226	-714	71	1	multi-exon	FALSE	canonical	1	102946	junction_6	64463.51859718017	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	85	1230	15.0	6	True	AATAAA	-16
PB.9711.1	chr6	-	1301	3	full-splice_match	LYRM4	ENST00000330636.8	7312	3	183	5828	-14	-2	multi-exon	FALSE	canonical	1	692472	junction_2	10975.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	24	299	35.0	673	False	AATAAA	-20
PB.9711.2	chr6	-	1781	2	incomplete-splice_match	LYRM4	ENST00000500576.4	592	3	-5	28453	0	21231	3prime_fragment	FALSE	canonical	1	692472	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.561.12	chr1	+	4491	9	novel_not_in_catalog	SLC35A3	novel	2298	8	NA	NA	1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	75076.83098832822	NA	9	NA	TRUE	NA	NA	NA	C	coding	325	978	157	1134	25.0	12	True	TATAAA	-29
PB.561.13	chr1	+	3961	11	novel_in_catalog	AC118553.2	novel	3175	20	NA	NA	67998	49	intron_retention	FALSE	canonical	1	415521	junction_7	114935.89273260116	NA	0	NA	TRUE	NA	NA	NA	B	coding	335	1008	155	1162	35.0	-1197	False	AATAAA	-27
PB.273.2	chr1	-	1052	2	full-splice_match	SMIM12	ENST00000521580.2	3454	2	25	2377	25	4	multi-exon	FALSE	canonical	1	301484	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	121	399	35.0	7837	False	ATTAAA	-19
PB.561.11	chr1	+	2676	8	full-splice_match	SLC35A3	ENST00000533028.7	14759	8	452	11631	0	-8	multi-exon	FALSE	canonical	1	84940	junction_1	50585.123224852076	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	169	1146	95.0	0	True	NA	NA
PB.561.16	chr1	+	2659	11	novel_in_catalog	AC118553.2	novel	3175	20	NA	NA	68014	50	no_combination_of_known_junctions	TRUE	canonical	1	29741	junction_6	191025.78897143702	NA	0	NA	TRUE	NA	NA	NA	B	coding	452	1359	139	1497	40.0	0	True	AATAAA	-28
PB.561.17	chr1	+	2565	11	novel_in_catalog	AC118553.2	novel	3175	20	NA	NA	68014	-57	no_combination_of_known_junctions	FALSE	canonical	1	5528	junction_7	200568.03203013187	NA	1	NA	TRUE	NA	NA	NA	B	coding	466	1401	139	1539	15.0	0	True	TATAAA	-14
PB.561.14	chr1	+	2126	12	full-splice_match	MFSD14A	ENST00000370152.7	2777	12	-4	655	-4	-655	multi-exon	FALSE	canonical	1	415521	junction_7	112516.85111246433	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	141	1613	70.0	-2	True	ACTAAA	-33
PB.10699.4	chr7	+	1646	9	novel_not_in_catalog	CPSF4	novel	1738	8	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	149494.7240314332	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	141	875	35.0	-3	True	ATTAAA	-12
PB.561.18	chr1	+	2648	12	full-splice_match	MFSD14A	ENST00000370152.7	2777	12	-1	130	-1	-130	multi-exon	FALSE	canonical	1	415521	junction_7	112516.85111246433	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	138	1610	10.0	1	True	TATAAA	-26
PB.561.19	chr1	+	2698	11	novel_in_catalog	AC118553.2	novel	3175	20	NA	NA	68015	39	no_combination_of_known_junctions	FALSE	canonical	1	3224	junction_2	201700.65580956844	NA	1	NA	TRUE	NA	NA	NA	B	coding	469	1410	138	1547	35.0	1	True	AATAAA	-17
PB.5627.1	chr19	+	2331	16	full-splice_match	HDGFL2	ENST00000616600.4	2281	16	-43	-7	-43	7	multi-exon	FALSE	canonical	1	246392	junction_6	213095.5671221092	NA	1	NA	TRUE	NA	NA	NA	A	coding	671	2016	108	2123	10.0	-53	True	TATAAA	-31
PB.2769.23	chr12	-	4536	1	novel_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1613	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	260	783	278	1060	45.0	-1	True	AATAAA	-21
PB.2769.24	chr12	-	4039	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	1693	9	-1693	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	45.0	-1	True	AAAAAG	-3
PB.2769.25	chr12	-	3863	3	novel_not_in_catalog	PHLDA1	novel	5741	2	NA	NA	6	-1613	intron_retention	FALSE	non_canonical	0	0	junction_2	571940.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	165	498	307	804	45.0	-4	True	AATAAA	-21
PB.5739.2	chr19	-	1681	2	novel_not_in_catalog	ZNF625-ZNF20	novel	2651	8	NA	NA	7	-1873	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	B	coding	143	432	995	1426	20.0	9	True	AATAAA	-15
PB.2769.28	chr12	-	3850	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	1882	9	-1882	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	35.0	-1	True	AAGAAA	-30
PB.2769.29	chr12	-	4322	1	novel_in_catalog	PHLDA1	novel	5741	2	NA	NA	9	-1827	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	260	783	278	1060	70.0	-1	True	AAAAAG	-12
PB.1071.1	chr1	+	1581	4	novel_not_in_catalog	BX571818.1	novel	527	4	NA	NA	-55	792	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-36	False	NA	NA
PB.7596.1	chr22	-	2457	6	full-splice_match	BID	ENST00000317361.11	2495	6	33	5	33	-1	multi-exon	FALSE	canonical	1	20370	junction_5	238562.08916204603	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	319	1020	15.0	-1	True	AATAAA	-13
PB.7596.6	chr22	-	950	6	full-splice_match	BID	ENST00000399774.7	2167	6	24	1193	21	135	multi-exon	FALSE	canonical	1	280414	junction_5	146206.77450597152	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	147	734	25.0	0	True	AATATA	-27
PB.5739.1	chr19	-	2755	4	novel_not_in_catalog	ZNF625-ZNF20	novel	2651	8	NA	NA	8773	-1873	intron_retention	FALSE	non_canonical	0	0	junction_1	16381.139419059551	NA	1	NA	TRUE	NA	NA	NA	B	coding	374	1125	148	1272	20.0	8815	False	AATAAA	-15
PB.7596.4	chr22	-	1928	4	full-splice_match	BID	ENST00000399765.5	1879	4	-16	-33	-10	0	multi-exon	FALSE	canonical	1	62259	junction_3	278287.1807951076	NA	3	NA	TRUE	NA	NA	NA	C	coding	99	300	191	490	20.0	-11	False	AATAAA	-14
PB.273.3	chr1	-	3072	2	novel_not_in_catalog	SMIM12	novel	2618	5	NA	NA	27	4	any annotated donor/acceptor	FALSE	canonical	1	2545	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	2474	3001	35.0	7839	False	ATTAAA	-19
PB.10986.38	chr8	-	2187	12	novel_in_catalog	CTSB	novel	660	4	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	1	3351	junction_10	2300309.0144946445	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	358	1377	25.0	-24	False	AATAAA	-22
PB.10312.2	chr6	-	2981	6	novel_not_in_catalog	SOD2	novel	14266	5	NA	NA	5	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1345964.4606351834	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	157	825	25.0	1116	False	AATAAA	-19
PB.3301.29	chr14	-	2249	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	233847	junction_6	892063.7360177452	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	701	1582	50.0	-1	True	AATAAA	-30
PB.11707.4	chr9	+	2541	6	full-splice_match	FAM206A	ENST00000322940.10	2134	6	242	-649	-20	649	multi-exon	FALSE	canonical	1	40817	junction_3	29541.501027537513	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	65	610	20.0	8	True	AATAAA	-20
PB.1155.35	chr1	-	1488	8	incomplete-splice_match	LBR	ENST00000272163.8	3745	14	-35	10679	-35	5369	3prime_fragment	FALSE	canonical	1	411936	junction_7	135103.73760173767	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	132	1226	35.0	-33	True	AGTAAA	-19
PB.11707.2	chr9	+	2530	5	novel_in_catalog	FAM206A	novel	2134	6	NA	NA	-58	-18	intron_retention	FALSE	canonical	1	40817	junction_2	31845.247285701833	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	796	1266	45.0	-30	True	AATAAA	-15
PB.11707.3	chr9	+	1752	5	novel_in_catalog	FAM206A	novel	2134	6	NA	NA	-26	-16	no_combination_of_known_junctions	FALSE	canonical	1	9604	junction_2	45157.713311238425	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	2	True	AATAAA	-17
PB.11707.1	chr9	+	1852	6	full-splice_match	FAM206A	ENST00000322940.10	2134	6	266	16	4	-16	multi-exon	FALSE	canonical	1	40817	junction_3	29541.501027537513	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	41	586	40.0	32	True	AATAAA	-17
PB.11616.1	chr9	+	4022	19	novel_not_in_catalog	TLE4	novel	3695	20	NA	NA	-26	-140	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	82081.61757499907	NA	3	1	TRUE	NA	NA	NA	A	coding	410	1233	1192	2424	20.0	0	True	ATTAAA	-18
PB.1430.8	chr10	-	5953	16	novel_in_catalog	JMJD1C	novel	7901	23	NA	NA	-17	-1801	combination_of_known_junctions	FALSE	canonical	1	38145	junction_15	114473.06423927374	NA	1	NA	TRUE	NA	NA	NA	C	coding	1813	5439	514	5952	70.0	22	True	AAAACA	-16
PB.5241.1	chr17	-	3175	4	full-splice_match	SUMO2	ENST00000420826.6	3190	4	15	0	-12	0	multi-exon	FALSE	canonical	1	333865	junction_1	243789.23003328557	NA	1	NA	TRUE	NA	NA	NA	C	coding	95	288	135	422	25.0	-10	True	AATATA	-17
PB.10699.6	chr7	+	5633	6	incomplete-splice_match	CPSF4	ENST00000436336.6	1738	8	29	-29	5	0	intron_retention	FALSE	canonical	1	262247	junction_2	86992.09562115399	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	133	900	35.0	5	True	ATTAAA	-12
PB.566.2	chr1	+	1573	12	full-splice_match	RTCA	ENST00000260563.4	1534	12	-42	3	0	-3	multi-exon	FALSE	canonical	1	20628	junction_2	214061.46820450376	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	170	1309	35.0	-31	True	AATAAA	-15
PB.1430.3	chr10	-	8580	24	novel_in_catalog	JMJD1C	novel	1305	3	NA	NA	10	-9	combination_of_known_junctions	FALSE	canonical	1	104403	junction_22	112472.95744052331	NA	4	NA	TRUE	NA	NA	NA	C	coding	2321	6966	800	7765	40.0	-1	True	ATTAAA	-42
PB.1430.2	chr10	-	8656	25	full-splice_match	JMJD1C	ENST00000542921.5	8149	25	-147	-360	-26	-9	multi-exon	FALSE	canonical	1	135611	junction_23	114413.28113390677	NA	2	1	TRUE	NA	NA	NA	C	coding	2321	6966	876	7841	40.0	0	True	ATTAAA	-42
PB.1430.7	chr10	-	6335	16	incomplete-splice_match	JMJD1C	ENST00000542921.5	8149	25	-167	23498	20	-1801	3prime_fragment	FALSE	canonical	1	135611	junction_14	91282.30033375706	NA	0	NA	TRUE	NA	NA	NA	C	coding	1813	5439	896	6334	70.0	9	False	AAAACA	-16
PB.11472.5	chr9	-	4359	17	full-splice_match	HAUS6	ENST00000380502.7	6536	17	-211	2388	-211	1087	multi-exon	FALSE	canonical	1	52	junction_7	73423.27835908782	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	812	3547	0.0	-212	False	ATTAAA	-16
PB.8840.4	chr4	+	5427	8	full-splice_match	CCNG2	ENST00000316355.9	5526	8	92	7	18	-7	multi-exon	FALSE	canonical	1	278896	junction_1	110473.54077528506	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	265	1299	40.0	0	True	NA	NA
PB.4267.1	chr16	-	1186	10	full-splice_match	NTAN1	ENST00000287706.7	1204	10	11	7	1	-6	multi-exon	FALSE	canonical	1	128047	junction_9	153151.63258735716	NA	0	NA	TRUE	NA	NA	NA	A	coding	310	933	83	1015	30.0	-15	True	AATAAA	-14
PB.11472.4	chr9	-	5735	17	full-splice_match	HAUS6	ENST00000380502.7	6536	17	193	608	193	-608	multi-exon	FALSE	canonical	1	52	junction_7	73423.27835908782	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	408	3143	35.0	-23	True	AATAAA	-15
PB.273.1	chr1	-	2573	2	full-splice_match	SMIM12	ENST00000521580.2	3454	2	19	862	19	-862	multi-exon	FALSE	canonical	1	301484	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	424	987	50.0	7831	False	NA	NA
PB.11472.7	chr9	-	3827	18	novel_not_in_catalog	HAUS6	novel	6536	17	NA	NA	201	916	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	74398.14214650262	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	400	3186	70.0	-15	True	AATAAA	-42
PB.1457.10	chr10	-	2601	13	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	76	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	3242587.5472088987	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	29	1459	15.0	-1	True	AATAAA	-15
PB.1457.17	chr10	-	3885	13	novel_in_catalog	PSAP	novel	2872	14	NA	NA	74	-2	intron_retention	FALSE	canonical	1	4769161	junction_12	2235697.6411683043	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	31	1641	20.0	-3	True	AATAAA	-13
PB.3823.3	chr15	+	3028	13	full-splice_match	PDIA3	ENST00000300289.9	3727	13	25	674	7	-674	multi-exon	TRUE	canonical	1	1203	junction_9	245681.09989408357	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	124	1641	40.0	-21	True	TATAAA	-15
PB.3823.2	chr15	+	1833	13	full-splice_match	PDIA3	ENST00000300289.9	3727	13	45	1849	-16	-115	multi-exon	FALSE	canonical	1	1203	junction_9	245681.09989408357	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	104	1621	30.0	-1	True	NA	NA
PB.3823.1	chr15	+	1842	13	full-splice_match	PDIA3	ENST00000300289.9	3727	13	143	1742	-77	-8	multi-exon	FALSE	canonical	1	1203	junction_9	245681.09989408357	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	6	1523	25.0	-64	False	AATAAA	-13
PB.3823.7	chr15	+	1587	13	full-splice_match	PDIA3	ENST00000300289.9	3727	13	46	2094	-15	-360	multi-exon	FALSE	canonical	1	1203	junction_9	245681.09989408357	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1485	103	1587	60.0	0	True	NA	NA
PB.3823.6	chr15	+	3681	13	full-splice_match	PDIA3	ENST00000300289.9	3727	13	46	0	-15	0	multi-exon	FALSE	canonical	1	1203	junction_9	245681.09989408357	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	103	1620	10.0	0	True	AGTAAA	-20
PB.3823.5	chr15	+	1506	12	incomplete-splice_match	PDIA3	ENST00000300289.9	3727	13	33	2712	15	-978	3prime_fragment	FALSE	canonical	1	1203	junction_9	253799.7290256712	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1389	116	1504	55.0	-13	True	NA	NA
PB.3823.4	chr15	+	2883	13	full-splice_match	PDIA3	ENST00000300289.9	3727	13	26	818	8	-818	multi-exon	FALSE	canonical	1	1203	junction_9	245681.09989408357	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	123	1640	40.0	-20	True	AGTAAA	-16
PB.7524.8	chr21	-	3348	7	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	2	-9	intron_retention	FALSE	canonical	1	33732	junction_3	314850.41545823344	NA	1	NA	TRUE	NA	NA	NA	C	coding	85	258	135	392	45.0	7	True	AATAAA	-10
PB.7524.1	chr21	-	2892	8	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	17	18	intron_retention	FALSE	canonical	1	40997	junction_3	309834.3348873091	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	1	435	35.0	271	False	AATAAA	-37
PB.7524.2	chr21	-	4419	3	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	0	-9	intron_retention	FALSE	canonical	1	590313	junction_2	203512.5	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	5	True	AATAAA	-10
PB.7524.5	chr21	-	4352	4	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	6	9	intron_retention	FALSE	canonical	1	227619	junction_2	314410.1403549192	NA	4	NA	TRUE	NA	NA	NA	C	coding	82	249	145	393	30.0	-3	True	AATAAA	-28
PB.7524.7	chr21	-	3928	4	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	-15	-6	intron_retention	FALSE	canonical	1	415313	junction_2	243823.12606796663	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	2944	3450	45.0	280	False	AATAAA	-13
PB.7524.6	chr21	-	1465	8	novel_in_catalog	HMGN1	novel	1303	7	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	18495	junction_3	313310.0181547383	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	481	987	45.0	4	True	AATAAA	-13
PB.1734.4	chr11	-	1837	7	novel_in_catalog	SIRT3	novel	2543	7	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	37445	junction_1	75983.92205463965	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	25	1278	25.0	-11	True	AATACA	-19
PB.1734.5	chr11	-	1784	7	full-splice_match	SIRT3	ENST00000382743.8	2543	7	78	681	-1	6	multi-exon	FALSE	canonical	1	59489	junction_6	59321.797237374914	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	26	1225	25.0	-12	True	AATACA	-19
PB.1734.2	chr11	-	2265	7	novel_not_in_catalog	SIRT3	novel	2543	7	NA	NA	-1	30	any annotated donor/acceptor	FALSE	canonical	1	1382	junction_6	78537.03339118998	NA	1	NA	TRUE	NA	NA	NA	C	coding	257	774	222	995	20.0	-12	True	AAAAAG	-23
PB.1734.3	chr11	-	2348	7	full-splice_match	SIRT3	ENST00000532837.5	1588	7	-10	-750	-1	29	multi-exon	FALSE	canonical	1	21357	junction_6	71775.0145951841	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	306	1079	20.0	-12	True	AAAAAG	-22
PB.1734.1	chr11	-	2491	7	full-splice_match	SIRT3	ENST00000382743.8	2543	7	82	-30	3	30	multi-exon	FALSE	canonical	1	59489	junction_6	59321.797237374914	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	22	1221	20.0	-8	True	AAAAAG	-23
PB.11274.33	chr8	-	2366	15	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	13982	junction_13	1908436.3276954337	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	506	2272	80.0	-2	True	AAAACA	-5
PB.924.2	chr1	+	2835	24	novel_not_in_catalog	C1orf112	novel	3849	29	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	46224.808007628926	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	65	2632	45.0	-6	True	TATAAA	-17
PB.3480.2	chr14	+	3340	1	novel_in_catalog	MNAT1	novel	612	2	NA	NA	0	-15873	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-30	True	NA	NA
PB.3480.3	chr14	+	1705	7	incomplete-splice_match	MNAT1	ENST00000261245.8	2635	8	-9	89332	-9	580	3prime_fragment	FALSE	canonical	1	295383	junction_2	38350.31860652819	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	111	932	75.0	-19	True	NA	NA
PB.11626.1	chr9	+	2101	11	incomplete-splice_match	NTRK2	ENST00000359847.3	6646	12	31317	4426	31317	-4426	5prime_fragment	TRUE	canonical	1	182703	junction_2	34361.339023530505	NA	0	NA	TRUE	NA	NA	NA	B	coding	321	966	439	1404	80.0	-8773	False	NA	NA
PB.3480.1	chr14	+	1390	8	full-splice_match	MNAT1	ENST00000261245.8	2635	8	-29	1274	-9	1	multi-exon	FALSE	canonical	1	295383	junction_2	36143.03562801779	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	131	1060	5.0	-39	True	AATAAA	-17
PB.11484.2	chr9	+	2275	3	incomplete-splice_match	CDKN2B-AS1	ENST00000584351.5	2660	13	-63	43538	-50	1396	3prime_fragment	FALSE	canonical	1	4665	junction_1	569.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-735	False	ATTAAA	-16
PB.11484.1	chr9	+	3404	2	novel_not_in_catalog	AL359922.1	novel	935	6	NA	NA	192084	-17897	intron_retention	FALSE	canonical	1	4308	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-743	False	NA	NA
PB.3916.2	chr15	-	3076	12	novel_in_catalog	DAPK2	novel	4835	12	NA	NA	-33	-167	intron_retention	FALSE	canonical	1	7133	junction_1	25722.84717541815	NA	8	NA	TRUE	NA	NA	NA	C	coding	370	1113	209	1321	90.0	-22	True	NA	NA
PB.9667.17	chr5	+	3560	15	full-splice_match	CANX	ENST00000247461.8	4260	15	37	663	-1	613	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	164	1942	20.0	-39	True	AATATA	-14
PB.3916.1	chr15	-	1910	12	full-splice_match	DAPK2	ENST00000457488.5	1741	12	-170	1	-56	-1	multi-exon	FALSE	canonical	1	17517	junction_11	19836.65794923735	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	232	1314	10.0	-45	True	ATTAAA	-16
PB.9099.2	chr4	-	2116	12	full-splice_match	UFSP2	ENST00000264689.10	1630	12	12	-498	-4	-251	multi-exon	FALSE	canonical	1	215271	junction_11	77206.06892751159	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	106	1515	25.0	-10	True	AATAAA	-43
PB.9099.3	chr4	-	1533	12	full-splice_match	UFSP2	ENST00000264689.10	1630	12	71	26	16	0	multi-exon	FALSE	canonical	1	215271	junction_11	77206.06892751159	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	47	1456	25.0	-1	True	AATAAA	-24
PB.9099.1	chr4	-	2369	12	full-splice_match	UFSP2	ENST00000264689.10	1630	12	15	-754	-1	5	multi-exon	FALSE	canonical	1	215271	junction_11	77206.06892751159	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	103	1512	20.0	-7	True	CATAAA	-36
PB.3960.24	chr15	-	2429	9	novel_in_catalog	PKM	novel	2526	11	NA	NA	4	603	combination_of_known_junctions	FALSE	canonical	1	24306	junction_8	6045617.859361724	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	218	1687	90.0	-13	True	TTTAAA	-21
PB.3960.25	chr15	-	2309	8	incomplete-splice_match	PKM	ENST00000335181.9	2318	11	7	6624	7	603	3prime_fragment	FALSE	canonical	1	7452251	junction_3	3621537.42329157	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	98	1567	90.0	-10	True	TTTAAA	-21
PB.3960.26	chr15	-	2304	8	novel_not_in_catalog	PKM	novel	2526	11	NA	NA	5	601	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	5430888.199483891	NA	6	2	TRUE	NA	NA	NA	C	coding	489	1470	95	1564	85.0	4	True	TTTAAA	-19
PB.3960.20	chr15	-	2836	8	incomplete-splice_match	PKM	ENST00000335181.9	2318	11	-6	6110	-6	1117	3prime_fragment	FALSE	canonical	1	7452251	junction_3	3621537.42329157	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	111	1580	75.0	-23	True	NA	NA
PB.3960.21	chr15	-	4129	6	novel_in_catalog	PKM	novel	2526	11	NA	NA	1	603	intron_retention	FALSE	canonical	1	7452251	junction_2	3925540.3121133475	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	2632	3387	90.0	0	True	TTTAAA	-21
PB.3960.22	chr15	-	3055	6	novel_in_catalog	PKM	novel	2526	11	NA	NA	-6	603	intron_retention	FALSE	canonical	1	7452251	junction_2	2422595.527778387	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	1042	1812	90.0	-23	True	TTTAAA	-21
PB.3960.23	chr15	-	2809	7	novel_in_catalog	PKM	novel	2526	11	NA	NA	-6	603	combination_of_known_junctions	FALSE	canonical	1	7452251	junction_3	3680649.2067336286	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	1042	2067	90.0	-23	True	TTTAAA	-21
PB.10556.1	chr7	+	4640	10	novel_in_catalog	CCT6A	novel	2719	14	NA	NA	-4	102	intron_retention	FALSE	canonical	1	878959	junction_9	817876.7901912282	NA	3	NA	TRUE	NA	NA	NA	C	coding	242	729	169	897	35.0	-6705	False	NA	NA
PB.10556.3	chr7	+	2829	13	novel_in_catalog	CCT6A	novel	2719	14	NA	NA	77	99	intron_retention	FALSE	canonical	1	878959	junction_12	818811.7795294856	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	88	1560	40.0	-3	True	NA	NA
PB.899.3	chr1	+	4630	7	full-splice_match	UCK2	ENST00000367879.8	1375	7	257	-3512	-17	3	multi-exon	FALSE	canonical	1	592800	junction_1	100720.66313558615	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	47	832	5.0	-36	True	AATAAA	-19
PB.10556.5	chr7	+	3415	13	novel_in_catalog	CCT6A	novel	2719	14	NA	NA	82	0	intron_retention	FALSE	canonical	1	878959	junction_12	818811.7795294856	NA	6	1	TRUE	NA	NA	NA	C	coding	490	1473	83	1555	10.0	2	True	AATAAA	-18
PB.10556.4	chr7	+	1858	13	full-splice_match	CCT6A	ENST00000335503.3	2529	13	80	591	80	99	multi-exon	FALSE	canonical	1	63883	junction_2	983469.4624577686	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	85	1545	40.0	0	True	NA	NA
PB.10556.7	chr7	+	2448	13	full-splice_match	CCT6A	ENST00000335503.3	2529	13	82	-1	82	1	multi-exon	FALSE	canonical	1	63883	junction_2	983469.4624577686	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	15.0	2	True	AATAAA	-19
PB.10556.6	chr7	+	3079	12	novel_in_catalog	CCT6A	novel	2719	14	NA	NA	82	96	intron_retention	FALSE	canonical	1	878959	junction_11	852611.1345950962	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	83	811	45.0	2	True	NA	NA
PB.10556.9	chr7	+	1888	13	novel_in_catalog	CCT6A	novel	2719	14	NA	NA	85	102	no_combination_of_known_junctions	FALSE	canonical	1	37365	junction_11	978416.8109323737	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	80	1453	35.0	5	True	NA	NA
PB.10556.8	chr7	+	1969	13	full-splice_match	CCT6A	ENST00000335503.3	2529	13	82	478	82	-109	multi-exon	FALSE	canonical	1	63883	junction_2	983469.4624577686	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	83	1543	45.0	2	True	NA	NA
PB.10465.16	chr7	-	2573	1	incomplete-splice_match	SCRN1	ENST00000242059.9	5257	8	66943	180	46212	-179	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	9378	False	TTTAAA	-31
PB.9667.12	chr5	+	3905	15	novel_in_catalog	CANX	novel	585	5	NA	NA	-8	-279	combination_of_known_junctions	FALSE	canonical	1	7409	junction_6	1647035.3344287926	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	920	1903	45.0	-46	True	AGTAAA	-9
PB.3083.1	chr13	-	3470	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	875	39	875	-39	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	272	625	25.0	2	True	ATTAAA	-18
PB.3083.3	chr13	-	3257	5	novel_not_in_catalog	UBL3	novel	4384	5	NA	NA	8591	-2	any annotated donor/acceptor	FALSE	canonical	1	96	junction_4	253614.19736321448	NA	2	NA	TRUE	NA	NA	NA	C	coding	73	222	154	375	20.0	8613	False	TTTAAA	-16
PB.3083.2	chr13	-	3889	4	novel_in_catalog	UBL3	novel	4384	5	NA	NA	353	-33	no_combination_of_known_junctions	FALSE	canonical	1	2314	junction_3	282039.8996079968	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	11	True	ATTAAA	-24
PB.3083.5	chr13	-	3782	6	novel_not_in_catalog	UBL3	novel	4384	5	NA	NA	344	-36	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	227337.2290219092	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	581	934	35.0	2	True	ATTAAA	-21
PB.9667.11	chr5	+	3898	15	full-splice_match	CANX	ENST00000452673.6	4207	15	30	279	-8	-279	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	118	1896	45.0	-46	True	AGTAAA	-9
PB.3083.9	chr13	-	3781	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	348	255	348	-255	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	799	1152	20.0	6	True	ATTAAA	-19
PB.9667.10	chr5	+	3832	15	full-splice_match	CANX	ENST00000247461.8	4260	15	149	279	29	-279	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	52	1830	45.0	3	True	AGTAAA	-9
PB.9085.1	chr4	-	2133	4	intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6067.751203425093	NA	14	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.9085.3	chr4	-	2250	1	intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	142	429	631	1059	5.0	-1	True	AATAAA	-16
PB.10465.11	chr7	-	5042	7	novel_in_catalog	SCRN1	novel	5257	8	NA	NA	7	-26	no_combination_of_known_junctions	TRUE	canonical	1	1604	junction_1	253495.40065167958	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	152	1075	70.0	-31	True	NA	NA
PB.3192.6	chr13	+	3076	18	full-splice_match	PIBF1	ENST00000326291.10	3154	18	74	4	-7	-4	multi-exon	FALSE	canonical	1	121177	junction_1	15572.672175262687	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	265	2538	35.0	0	True	AATAAA	-37
PB.3192.7	chr13	+	2142	1	novel_in_catalog	PIBF1	novel	3154	18	NA	NA	-7	-13752	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	1338	1652	95.0	0	True	NA	NA
PB.3192.4	chr13	+	2711	17	novel_in_catalog	PIBF1	novel	3154	18	NA	NA	-16	100	no_combination_of_known_junctions	FALSE	canonical	1	7421	junction_15	38011.02530023362	NA	8	NA	TRUE	NA	NA	NA	C	coding	659	1980	274	2253	25.0	-9	True	AATAAA	-42
PB.3192.5	chr13	+	2800	18	full-splice_match	PIBF1	ENST00000326291.10	3154	18	73	281	-8	112	multi-exon	FALSE	canonical	1	121177	junction_1	15572.672175262687	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	266	2539	35.0	-1	True	CATAAA	-16
PB.11538.13	chr9	+	2572	17	novel_in_catalog	MELK	novel	2485	18	NA	NA	15	-1	combination_of_known_junctions	TRUE	canonical	1	36633	junction_1	102880.40981293448	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	373	2229	10.0	-19	True	AATAAA	-15
PB.3192.3	chr13	+	2860	19	novel_not_in_catalog	PIBF1	novel	3154	18	NA	NA	-16	77	any annotated donor/acceptor	FALSE	canonical	1	5296	junction_9	47018.830978484926	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	274	2634	35.0	-9	True	AATAAA	-19
PB.3192.1	chr13	+	2255	9	incomplete-splice_match	PIBF1	ENST00000617689.4	2882	16	-45	138153	36	822	3prime_fragment	TRUE	canonical	1	121177	junction_1	16222.547086828721	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	303	1529	90.0	-1499	False	NA	NA
PB.3192.8	chr13	+	1903	12	incomplete-splice_match	PIBF1	ENST00000617689.4	2882	16	-7	65570	-7	14810	3prime_fragment	FALSE	canonical	1	121177	junction_1	17842.18923305375	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1638	265	1902	25.0	0	True	AAAAAG	-34
PB.3192.9	chr13	+	2463	17	novel_in_catalog	PIBF1	novel	3154	18	NA	NA	-6	76	combination_of_known_junctions	FALSE	canonical	1	10335	junction_1	37422.08022094042	NA	1	1	TRUE	NA	NA	NA	C	coding	630	1893	346	2238	35.0	1	True	AATAAA	-18
PB.7216.1	chr20	-	3128	2	full-splice_match	NANP	ENST00000304788.3	3964	2	194	642	194	-642	multi-exon	FALSE	canonical	1	62092	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	34	780	30.0	3	True	AATAAA	-15
PB.8493.6	chr3	+	2660	5	incomplete-splice_match	GFM1	ENST00000478576.5	2147	14	1	31411	1	2	3prime_fragment	FALSE	canonical	1	243185	junction_1	99004.97063626401	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	107	799	100.0	2	True	NA	NA
PB.7216.3	chr20	-	2382	2	full-splice_match	NANP	ENST00000304788.3	3964	2	168	1414	168	-1414	multi-exon	FALSE	canonical	1	62092	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	60	806	20.0	-23	True	AATAAA	-22
PB.8493.4	chr3	+	3221	19	full-splice_match	GFM1	ENST00000264263.9	3453	19	-68	300	1	-300	multi-exon	FALSE	canonical	1	15479	junction_6	185149.65270843063	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	107	2419	10.0	2	True	AGTAAA	-21
PB.8493.3	chr3	+	2682	19	full-splice_match	GFM1	ENST00000264263.9	3453	19	-70	841	-1	-171	multi-exon	FALSE	canonical	1	15479	junction_6	185149.65270843063	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	109	2421	45.0	0	True	AATAAA	-16
PB.7216.4	chr20	-	4851	1	novel_in_catalog	NANP	novel	3964	2	NA	NA	185	-6205	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-6	True	NA	NA
PB.8493.1	chr3	+	2927	17	novel_in_catalog	GFM1	novel	3721	18	NA	NA	-10	239	no_combination_of_known_junctions	FALSE	canonical	1	9909	junction_4	166838.69911716937	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	118	2256	15.0	-9	True	ATTAAA	-17
PB.2359.1	chr11	+	1733	9	full-splice_match	FAM118B	ENST00000533050.5	2402	9	338	331	-14	24	multi-exon	TRUE	canonical	1	106955	junction_1	45536.06336671518	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	156	1211	20.0	0	True	ATTAAA	-24
PB.775.11	chr1	-	2023	8	novel_not_in_catalog	TPM3	novel	3149	7	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	793092.5191551341	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	85	750	30.0	4	True	AATAAA	-15
PB.8001.9	chr3	-	2323	16	novel_not_in_catalog	GLB1	novel	2616	16	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	473	junction_1	161429.691994778	NA	2	NA	TRUE	NA	NA	NA	C	coding	650	1953	60	2012	30.0	1	True	AATAAA	-11
PB.2359.2	chr11	+	2157	7	incomplete-splice_match	FAM118B	ENST00000533050.5	2402	9	341	5111	-11	1070	3prime_fragment	FALSE	canonical	1	106955	junction_1	37695.85169337455	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	153	1202	35.0	3	True	AATAAA	-17
PB.9481.11	chr5	+	3396	18	novel_not_in_catalog	CTNNA1	novel	696	6	NA	NA	4	-118	any annotated donor/acceptor	FALSE	canonical	1	8176	junction_17	430134.51051742205	NA	1	NA	TRUE	NA	NA	NA	C	coding	897	2694	79	2772	25.0	10	True	AATAAA	-19
PB.8493.8	chr3	+	3609	19	novel_not_in_catalog	GFM1	novel	3721	18	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	2286	junction_6	186770.35649543558	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	919	2508	15.0	8	True	AATAAA	-12
PB.8332.6	chr3	-	2709	15	incomplete-splice_match	POLQ	ENST00000264233.5	8775	30	-1	61990	-1	28150	3prime_fragment	FALSE	canonical	1	34479	junction_8	6742.368361521712	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	131	2656	55.0	-1	True	AATAAA	-18
PB.7307.4	chr20	-	1470	11	full-splice_match	ADA	ENST00000537820.1	1128	11	-56	-286	-5	-2	multi-exon	FALSE	canonical	1	41965	junction_5	217877.38876810967	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	141	1160	25.0	-15	True	AATAAA	-23
PB.8332.4	chr3	-	3603	15	novel_in_catalog	POLQ	novel	9055	31	NA	NA	19	32264	no_combination_of_known_junctions	FALSE	canonical	1	4548	junction_13	13032.843075774184	NA	1	NA	TRUE	NA	NA	NA	C	coding	1002	3006	598	3603	70.0	-6	True	NA	NA
PB.7307.2	chr20	-	1618	11	full-splice_match	ADA	ENST00000492931.5	1276	11	-55	-287	-4	-1	multi-exon	TRUE	canonical	1	290464	junction_10	154810.88860571146	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	140	964	25.0	-14	True	AATAAA	-24
PB.7307.3	chr20	-	1519	12	full-splice_match	ADA	ENST00000372874.8	1539	12	18	2	18	-2	multi-exon	FALSE	canonical	1	290464	junction_11	147617.97948194042	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	118	1209	25.0	8	True	AATAAA	-23
PB.8332.1	chr3	-	8764	30	full-splice_match	POLQ	ENST00000264233.5	8775	30	15	-4	15	0	multi-exon	FALSE	canonical	1	34479	junction_23	23261.852870531908	NA	0	NA	TRUE	NA	NA	NA	C	coding	2590	7773	115	7887	30.0	-10	True	AATAAA	-21
PB.7307.1	chr20	-	2017	11	novel_not_in_catalog	ADA	novel	1770	7	NA	NA	-8	1	intron_retention	TRUE	canonical	1	2997	junction_5	206983.58270316996	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	93	1418	20.0	-1	True	AATAAA	-26
PB.2359.4	chr11	+	2040	9	full-splice_match	FAM118B	ENST00000533050.5	2402	9	362	0	-1	0	multi-exon	FALSE	canonical	1	106955	junction_1	45536.06336671518	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	132	1187	25.0	-6	True	NA	NA
PB.8713.2	chr4	-	3491	7	full-splice_match	LCORL	ENST00000326877.8	5604	7	97	2016	-22	-1335	multi-exon	FALSE	canonical	1	23597	junction_1	34791.419554012646	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	29	985	25.0	-25	False	AATAAA	-22
PB.7084.4	chr2	+	4482	6	full-splice_match	SH3BP4	ENST00000392011.6	5194	6	46	666	-16	-600	multi-exon	FALSE	canonical	1	84063	junction_1	101658.04051151095	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	359	3250	40.0	2	True	CATAAA	-13
PB.8001.5	chr3	-	2441	16	novel_not_in_catalog	GLB1	novel	2616	16	NA	NA	-15	-4	any annotated donor/acceptor	FALSE	canonical	1	1104	junction_15	156798.82578704332	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	186	2129	25.0	-16	False	AATAAA	-12
PB.7084.2	chr2	+	4815	6	full-splice_match	SH3BP4	ENST00000392011.6	5194	6	31	348	-31	-282	multi-exon	FALSE	canonical	1	84063	junction_1	101658.04051151095	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	374	3265	70.0	-64	False	NA	NA
PB.8461.14	chr3	-	4902	6	novel_in_catalog	WWTR1	novel	5030	8	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	1332	junction_2	207072.85066526706	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	265	1068	15.0	-1	True	AATAAA	-16
PB.7084.1	chr2	+	5095	6	full-splice_match	SH3BP4	ENST00000392011.6	5194	6	31	68	-31	-2	multi-exon	FALSE	canonical	1	84063	junction_1	101658.04051151095	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	374	3265	20.0	-64	False	AATAAA	-40
PB.4921.11	chr17	+	2653	13	incomplete-splice_match	GGNBP2	ENST00000613102.4	2847	14	711	4	95	-4	5prime_fragment	FALSE	canonical	1	336458	junction_6	177965.61984651466	NA	1	NA	TRUE	NA	NA	NA	C	coding	697	2094	127	2220	30.0	-22	True	AATAAA	-24
PB.4921.10	chr17	+	1308	8	incomplete-splice_match	GGNBP2	ENST00000618837.4	2346	10	608	4712	36	-1031	internal_fragment	FALSE	canonical	1	336458	junction_6	145994.1989687625	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1122	186	1307	60.0	-81	True	AAGAAA	-10
PB.6284.1	chr2	-	1813	11	full-splice_match	SH3YL1	ENST00000403658.5	1279	11	-14	-520	0	3	multi-exon	FALSE	canonical	1	19403	junction_7	142971.9523550336	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	465	1148	25.0	-15	True	AATAAA	-23
PB.4921.12	chr17	+	2260	13	novel_not_in_catalog	GGNBP2	novel	2847	14	NA	NA	98	-129	any annotated donor/acceptor	FALSE	canonical	1	224369	junction_6	196542.71717725045	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	124	2223	15.0	-19	True	AATAAA	-33
PB.8362.3	chr3	-	7673	9	full-splice_match	ZNF148	ENST00000360647.8	9651	9	86	1892	-1	-1892	multi-exon	FALSE	canonical	1	107707	junction_8	40361.19997286998	NA	9	NA	TRUE	NA	NA	NA	C	coding	794	2385	401	2785	30.0	42	False	ATTAAA	-12
PB.3807.9	chr15	+	2265	8	full-splice_match	SNAP23	ENST00000249647.7	2687	8	415	7	-3	-5	multi-exon	FALSE	canonical	1	664867	junction_3	125661.35040071236	NA	5	NA	TRUE	NA	NA	NA	C	coding	211	636	54	689	25.0	-3	True	ATTAAA	-10
PB.3807.8	chr15	+	2149	7	full-splice_match	SNAP23	ENST00000349777.5	2480	7	328	3	0	-3	multi-exon	TRUE	canonical	1	27937	junction_5	294807.9746569508	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	95	571	20.0	-44	True	ATTAAA	-12
PB.3807.5	chr15	+	2447	8	full-splice_match	SNAP23	ENST00000249647.7	2687	8	363	-123	-11	123	multi-exon	FALSE	canonical	1	664867	junction_3	125661.35040071236	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	106	741	25.0	-55	True	AATAAA	-33
PB.3807.4	chr15	+	2171	8	full-splice_match	SNAP23	ENST00000249647.7	2687	8	394	122	1	-120	multi-exon	FALSE	canonical	1	664867	junction_3	125661.35040071236	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	75	710	20.0	-24	True	NA	NA
PB.3807.7	chr15	+	2732	7	novel_in_catalog	SNAP23	novel	814	4	NA	NA	-2	15	intron_retention	FALSE	canonical	1	675986	junction_4	121334.31533634204	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	628	1134	40.0	-46	True	ATTAAA	-32
PB.3807.6	chr15	+	3772	6	novel_in_catalog	SNAP23	novel	814	4	NA	NA	-8	0	intron_retention	FALSE	canonical	1	675986	junction_3	117635.90296911908	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	1685	2191	30.0	-52	True	ATTAAA	-15
PB.3807.1	chr15	+	2395	9	novel_in_catalog	SNAP23	novel	814	4	NA	NA	8	-4	intron_retention	FALSE	canonical	1	878	junction_1	367398.602762041	NA	4	NA	TRUE	NA	NA	NA	C	coding	211	636	183	818	25.0	-4426	False	ATTAAA	-11
PB.3807.3	chr15	+	2456	9	novel_not_in_catalog	SNAP23	novel	814	4	NA	NA	-27	0	intron_retention	FALSE	canonical	1	2298	junction_1	366792.4494143239	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	240	875	30.0	0	True	ATTAAA	-15
PB.3807.2	chr15	+	2035	6	full-splice_match	SNAP23	ENST00000564153.5	775	6	-28	-1232	-28	0	multi-exon	FALSE	canonical	1	3094	junction_5	319162.77337910194	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	123	506	30.0	-1	True	ATTAAA	-15
PB.8376.4	chr3	-	3565	2	incomplete-splice_match	MGLL	ENST00000479967.5	1059	6	-16	102918	-16	-36603	3prime_fragment	FALSE	canonical	1	291676	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	2063	2365	80.0	-17	True	NA	NA
PB.12285.1	chrX	-	2507	5	novel_not_in_catalog	CT45A10	novel	1010	5	NA	NA	-4403	1591	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	189	570	152	721	25.0	-46	False	NA	NA
PB.12285.2	chrX	-	2489	5	novel_not_in_catalog	CT45A10	novel	1010	5	NA	NA	-4374	1585	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	B	coding	189	570	140	709	35.0	-17	False	NA	NA
PB.11383.1	chr8	+	2706	3	antisense	novelGene_PUF60_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9592	junction_1	3785.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	116	351	873	1223	5.0	-494	False	NA	NA
PB.10775.25	chr7	-	2170	11	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	62	570	combination_of_known_junctions	FALSE	canonical	1	7785	junction_10	167687.9435206956	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	1268	1642	20.0	1349	False	AATAAA	-14
PB.10775.24	chr7	-	2286	11	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	76	700	combination_of_known_junctions	FALSE	canonical	1	7785	junction_10	167687.9435206956	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	1254	1628	30.0	0	True	ATTAAA	-22
PB.10775.27	chr7	-	2337	12	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	-167	567	combination_of_known_junctions	FALSE	canonical	1	10833	junction_7	545300.7299533772	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	337	1812	30.0	-1	True	AATAAA	-11
PB.9027.12	chr4	-	3242	15	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-19	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	100858.59747081858	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	1061	3184	70.0	-20	True	NA	NA
PB.10775.21	chr7	-	2690	11	novel_in_catalog	NAMPT	novel	4582	11	NA	NA	57	1085	combination_of_known_junctions	FALSE	canonical	1	7785	junction_10	167687.9435206956	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	1273	1647	40.0	1344	False	ATTAAA	-21
PB.12304.4	chrX	-	2541	6	full-splice_match	TMEM185A	ENST00000611119.4	2662	6	120	1	-72	-1	multi-exon	FALSE	canonical	1	828	junction_1	79033.97821038746	NA	2	NA	TRUE	NA	NA	NA	C	coding	291	876	213	1088	25.0	-1	True	AATAAA	-15
PB.8483.1	chr3	+	2337	17	novel_not_in_catalog	GMPS	novel	8751	16	NA	NA	-15740	0	any annotated donor/acceptor	FALSE	canonical	1	133	junction_2	367205.68523839925	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	259	2319	30.0	-19	True	AATAAA	-15
PB.4089.8	chr15	-	2190	4	novel_not_in_catalog	FAM174B	novel	2792	3	NA	NA	174	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	99486.5871462078	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	126	605	30.0	-10	True	AATAAA	-15
PB.8483.3	chr3	+	2282	16	full-splice_match	GMPS	ENST00000496455.6	8751	16	158	6311	44	5	multi-exon	FALSE	canonical	1	45409	junction_14	310376.0047514126	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	178	2259	25.0	32	True	AATAAA	-20
PB.8483.4	chr3	+	5309	16	full-splice_match	GMPS	ENST00000496455.6	8751	16	81	3361	-33	2955	multi-exon	FALSE	canonical	1	45409	junction_14	310376.0047514126	NA	2	NA	TRUE	NA	NA	NA	C	coding	693	2082	255	2336	40.0	-45	True	NA	NA
PB.12304.1	chrX	-	2849	8	novel_not_in_catalog	TMEM185A	novel	3742	3	NA	NA	-69	6	intron_retention	FALSE	canonical	1	828	junction_1	83107.52689088015	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	210	650	15.0	2	True	AATAAA	-23
PB.12304.2	chrX	-	2660	8	novel_not_in_catalog	TMEM185A	novel	3742	3	NA	NA	-85	5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	84227.3230480272	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	226	1278	15.0	-14	True	AATAAA	-22
PB.12304.3	chrX	-	2724	7	full-splice_match	TMEM185A	ENST00000600449.7	2840	7	120	-4	-72	4	multi-exon	FALSE	canonical	1	828	junction_1	79530.94006056176	NA	2	NA	TRUE	NA	NA	NA	C	coding	350	1053	213	1265	15.0	-1	True	AATAAA	-21
PB.4089.2	chr15	-	2544	3	full-splice_match	FAM174B	ENST00000327355.5	2792	3	240	8	240	-3	multi-exon	FALSE	canonical	1	164625	junction_2	36646.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	159	480	60	539	30.0	56	True	AATAAA	-15
PB.8483.9	chr3	+	2973	16	full-splice_match	GMPS	ENST00000496455.6	8751	16	123	5655	9	661	multi-exon	FALSE	canonical	1	45409	junction_14	310376.0047514126	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	213	2294	30.0	-3	True	NA	NA
PB.8479.1	chr3	-	3575	25	full-splice_match	DHX36	ENST00000496811.5	6733	25	35	3123	-2	-1	multi-exon	FALSE	canonical	1	245994	junction_22	85798.50177009536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	47	3073	20.0	-1	True	AATAAA	-37
PB.4089.1	chr15	-	2231	3	novel_in_catalog	FAM174B	novel	2792	3	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	2791	junction_2	117563.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	1592	2011	15.0	NA	False	AATAAA	-22
PB.4089.6	chr15	-	3261	4	novel_not_in_catalog	FAM174B	novel	2792	3	NA	NA	209	-3	any annotated donor/acceptor	FALSE	canonical	1	645	junction_1	77285.36166700651	NA	5	1	TRUE	NA	NA	NA	C	coding	175	528	91	618	30.0	25	True	AATAAA	-15
PB.4089.7	chr15	-	2442	4	novel_in_catalog	FAM174B	novel	2792	3	NA	NA	-56295	-3	no_combination_of_known_junctions	FALSE	canonical	1	452	junction_3	109943.98164317844	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	1810	2229	30.0	9938	False	AATAAA	-15
PB.4089.4	chr15	-	2273	2	novel_not_in_catalog	FAM174B	novel	2792	3	NA	NA	17108	-2	any annotated donor/acceptor	FALSE	canonical	1	3695	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	27	84	246	329	25.0	NA	False	AATAAA	-16
PB.4089.5	chr15	-	2265	2	novel_not_in_catalog	FAM174B	novel	2792	3	NA	NA	16729	-2	any annotated donor/acceptor	FALSE	canonical	1	32	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	1632	2051	25.0	NA	False	AATAAA	-16
PB.144.7	chr1	-	2536	1	novel_in_catalog	DDOST	novel	2126	11	NA	NA	-17	1526	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-6	True	NA	NA
PB.8304.1	chr3	+	4635	23	novel_in_catalog	SIDT1	novel	5080	25	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	6535	junction_4	16449.787936285386	NA	0	NA	TRUE	NA	NA	NA	B	coding	765	2298	468	2765	20.0	-11	True	NA	NA
PB.144.5	chr1	-	1889	11	full-splice_match	DDOST	ENST00000602624.6	1963	11	8	66	5	-66	multi-exon	FALSE	canonical	1	2573028	junction_4	657504.5291691609	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	34	1353	75.0	-15	True	NA	NA
PB.8304.3	chr3	+	4697	24	novel_in_catalog	SIDT1	novel	5080	25	NA	NA	0	-40	no_combination_of_known_junctions	FALSE	canonical	1	10247	junction_5	15816.1924105244	NA	2	NA	TRUE	NA	NA	NA	B	coding	799	2400	468	2867	90.0	-11	True	NA	NA
PB.8304.4	chr3	+	4560	22	novel_in_catalog	SIDT1	novel	5080	25	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	6535	junction_4	18847.318824457452	NA	0	NA	TRUE	NA	NA	NA	B	coding	479	1440	467	1906	20.0	-10	True	NA	NA
PB.8304.5	chr3	+	4654	25	novel_not_in_catalog	SIDT1	novel	5080	25	NA	NA	1	-40	any annotated donor/acceptor	FALSE	canonical	1	28	junction_24	17970.961481835002	NA	29	1	TRUE	NA	NA	NA	B	coding	807	2424	467	2890	90.0	-10	True	NA	NA
PB.8304.6	chr3	+	4482	25	novel_in_catalog	SIDT1	novel	5080	25	NA	NA	-126	-40	no_combination_of_known_junctions	FALSE	canonical	1	4154	junction_19	17116.024009357105	NA	4	NA	TRUE	NA	NA	NA	B	coding	828	2487	166	2652	90.0	14	True	NA	NA
PB.8304.7	chr3	+	4041	1	novel_in_catalog	SIDT1	novel	5080	25	NA	NA	-10256	-3409	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.11448.2	chr9	-	3483	2	full-splice_match	RANBP6	ENST00000485372.1	1000	2	-12	-2471	1	16	multi-exon	FALSE	canonical	1	7077	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	139	2220	20.0	-10	True	NA	NA
PB.4741.1	chr17	-	3932	1	full-splice_match	AC016876.3	ENST00000610459.1	426	1	-3560	54	-3560	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	168	507	2381	2887	40.0	29	False	AATAAA	-27
PB.144.9	chr1	-	2457	1	novel_in_catalog	DDOST	novel	2126	11	NA	NA	12	1360	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	2	True	NA	NA
PB.144.8	chr1	-	2309	2	full-splice_match	DDOST	ENST00000477229.1	766	2	-18	-1525	1	1525	multi-exon	FALSE	canonical	1	2929736	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	132	399	38	436	95.0	136	False	NA	NA
PB.11404.6	chr8	+	2884	12	novel_in_catalog	PPP1R16A	novel	4311	9	NA	NA	5	0	intron_retention	FALSE	canonical	1	25500	junction_1	101503.02606953513	NA	0	NA	TRUE	NA	NA	NA	B	coding	528	1587	1081	2667	5.0	-3	True	GATAAA	-18
PB.11404.4	chr8	+	2930	13	novel_not_in_catalog	PPP1R16A	novel	4311	9	NA	NA	37	0	intron_retention	FALSE	canonical	1	58	junction_2	128564.97346705025	NA	4	2	TRUE	NA	NA	NA	B	coding	528	1587	1127	2713	5.0	14	True	GATAAA	-18
PB.11404.5	chr8	+	2937	10	novel_in_catalog	PPP1R16A	novel	4311	9	NA	NA	-29	-1	intron_retention	FALSE	canonical	1	87905	junction_1	97466.17405686933	NA	1	NA	TRUE	NA	NA	NA	B	coding	582	1749	973	2721	5.0	63	True	GATAAA	-17
PB.11404.2	chr8	+	2755	12	novel_in_catalog	PPP1R16A	novel	4311	9	NA	NA	-15	-7	intron_retention	FALSE	canonical	1	87905	junction_1	89966.0850834339	NA	1	NA	TRUE	NA	NA	NA	B	coding	528	1587	959	2545	10.0	77	True	GATAAA	-11
PB.11404.3	chr8	+	2927	11	novel_in_catalog	PPP1R16A	novel	4311	9	NA	NA	30	0	intron_retention	FALSE	canonical	1	87905	junction_1	92480.51577759502	NA	0	NA	TRUE	NA	NA	NA	B	coding	240	723	1029	1751	5.0	7	True	GATAAA	-18
PB.3728.2	chr15	+	2732	2	novel_in_catalog	MKRN3	novel	470	3	NA	NA	0	1559	no_combination_of_known_junctions	FALSE	canonical	1	794	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	110	1075	75.0	0	True	NA	NA
PB.8713.5	chr4	-	4877	7	full-splice_match	LCORL	ENST00000382226.5	5009	7	94	38	-9	-38	multi-exon	FALSE	canonical	1	37932	junction_1	30574.2962942549	NA	4	NA	TRUE	NA	NA	NA	C	coding	595	1788	37	1824	25.0	-12	False	AGTAAA	-29
PB.3728.1	chr15	+	2187	3	full-splice_match	MKRN3	ENST00000564592.1	629	3	-100	-1458	-1	1458	multi-exon	FALSE	canonical	1	10120	junction_2	236.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	111	659	75.0	-1	True	NA	NA
PB.11932.10	chr9	+	4673	27	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	2	-25	combination_of_known_junctions	FALSE	canonical	1	133861	junction_1	83709.3380101682	NA	1	NA	TRUE	NA	NA	NA	C	coding	1291	3876	35	3910	80.0	-16	True	AATAAA	-42
PB.1596.1	chr10	-	4512	21	full-splice_match	CHUK	ENST00000370397.7	3625	21	15	-902	15	902	multi-exon	FALSE	canonical	1	162873	junction_20	47209.05163766267	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	73	2310	30.0	-9	True	AATAAA	-15
PB.8587.33	chr3	+	6205	2	incomplete-splice_match	EIF4A2	ENST00000468362.5	1356	5	-2384	-1526	0	0	intron_retention	FALSE	canonical	1	2449245	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	AATAAA	-16
PB.8587.32	chr3	+	1725	11	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-116	combination_of_known_junctions	FALSE	canonical	1	572904	junction_10	1027357.0458672144	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	180	983	25.0	0	True	AATAAA	-17
PB.8587.31	chr3	+	1864	12	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-116	combination_of_known_junctions	FALSE	canonical	1	328104	junction_11	1085259.583500511	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	35	1126	25.0	0	True	AATAAA	-17
PB.8587.30	chr3	+	2435	10	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-110	intron_retention	FALSE	canonical	1	824037	junction_3	941247.5984104853	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	180	983	25.0	0	True	AATAAA	-23
PB.8587.36	chr3	+	2046	10	incomplete-splice_match	EIF4A2	ENST00000440191.6	1889	11	628	4	2	-1	5prime_fragment	FALSE	canonical	1	1541841	junction_9	812404.0749158034	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	250	1422	20.0	2	True	AATAAA	-15
PB.8587.35	chr3	+	1620	10	novel_not_in_catalog	EIF4A2	novel	480	4	NA	NA	0	-116	any annotated donor/acceptor	FALSE	canonical	1	24	junction_7	909223.3678162158	NA	12	1	TRUE	NA	NA	NA	C	coding	212	639	179	817	25.0	1	True	AATAAA	-17
PB.8587.34	chr3	+	3342	9	incomplete-splice_match	EIF4A2	ENST00000425053.5	1977	12	1	-13	0	0	intron_retention	FALSE	canonical	1	1549925	junction_3	764565.4003280945	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	34	1218	20.0	1	True	AATAAA	-16
PB.12299.2	chrX	-	2580	2	full-splice_match	SLITRK4	ENST00000338017.8	3357	2	157	620	157	-620	multi-exon	FALSE	canonical	1	10511	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	787	2361	220	2580	60.0	0	True	AAAACA	-8
PB.12299.1	chrX	-	3216	2	full-splice_match	SLITRK4	ENST00000338017.8	3357	2	135	6	135	-6	multi-exon	FALSE	canonical	1	10511	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	242	2755	90.0	1008	False	NA	NA
PB.1995.29	chr11	-	3671	24	full-splice_match	GANAB	ENST00000356638.7	3608	24	-48	-15	-32	15	multi-exon	FALSE	canonical	1	1329777	junction_23	479490.5027171953	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	66	2900	25.0	6637	False	NA	NA
PB.4991.1	chr17	-	3063	2	full-splice_match	CAVIN1	ENST00000357037.5	3828	2	761	4	761	-4	multi-exon	FALSE	canonical	1	2059860	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	237	714	119	832	30.0	552	False	AATAAA	-12
PB.4991.2	chr17	-	2386	2	full-splice_match	CAVIN1	ENST00000357037.5	3828	2	258	1184	258	-1184	multi-exon	FALSE	canonical	1	2059860	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	163	1335	70.0	-4	True	NA	NA
PB.4991.3	chr17	-	2221	3	novel_not_in_catalog	CAVIN1	novel	3828	2	NA	NA	261	-1184	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1029930.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	160	1332	70.0	-1	True	NA	NA
PB.1995.22	chr11	-	5145	23	novel_in_catalog	GANAB	novel	3718	23	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1329777	junction_22	466884.19007417344	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	2051	4162	30.0	6681	False	AATAAA	-13
PB.9541.8	chr5	-	3291	4	full-splice_match	YIPF5	ENST00000508754.1	793	4	3	-2501	-2	-884	multi-exon	FALSE	canonical	1	593058	junction_1	66499.58317663854	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	114	578	100.0	14	True	NA	NA
PB.6453.1	chr2	+	4334	2	full-splice_match	SOCS5	ENST00000306503.5	4771	2	-37	474	-37	342	multi-exon	FALSE	canonical	1	6180	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	228	1820	30.0	-22	True	AAAAAG	-14
PB.1995.26	chr11	-	3661	26	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	834193.930074584	NA	0	NA	TRUE	NA	NA	NA	C	coding	966	2901	15	2915	30.0	-1	True	AATAAA	-12
PB.1995.27	chr11	-	3586	25	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	-3	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	668722.8516834335	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	22	2856	30.0	6681	False	AATAAA	-12
PB.1995.25	chr11	-	5039	24	novel_not_in_catalog	GANAB	novel	3718	23	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	671567.5239811342	NA	1	1	TRUE	NA	NA	NA	C	coding	703	2112	2044	4155	30.0	-1	True	AATAAA	-13
PB.11152.38	chr8	-	2607	14	novel_in_catalog	ASPH	novel	5268	25	NA	NA	1	-217	combination_of_known_junctions	FALSE	canonical	1	298693	junction_4	596317.4509637706	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	216	1154	40.0	5	True	AATAAA	-22
PB.1369.8	chr10	-	3057	6	full-splice_match	ZNF248	ENST00000395867.7	5141	6	1	2083	1	8	multi-exon	FALSE	canonical	1	39558	junction_5	45712.847934032725	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	551	2290	25.0	0	True	NA	NA
PB.1369.9	chr10	-	3421	4	incomplete-splice_match	ZNF248	ENST00000395873.7	698	6	408	-1802	7	-397	intron_retention	FALSE	canonical	1	110704	junction_3	23435.655058052038	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	1320	3059	20.0	-20	True	ATTAAA	-18
PB.5977.2	chr19	+	2455	16	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	-23	379	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	941672.3974242988	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	121	1953	35.0	-61	False	AATAAA	-16
PB.1369.4	chr10	-	4856	5	incomplete-splice_match	ZNF248	ENST00000485560.5	1705	7	-78	26148	7	-206	3prime_fragment	FALSE	canonical	1	14732	junction_4	59350.16803683036	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	473	2212	20.0	-20	True	AATAAA	-18
PB.1369.5	chr10	-	3979	5	full-splice_match	ZNF248	ENST00000611278.4	4204	5	19	206	-7	-206	multi-exon	FALSE	canonical	1	63166	junction_1	40285.57512001039	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	1308	1667	20.0	-8	True	AATAAA	-18
PB.6402.3	chr2	+	4730	13	novel_in_catalog	SLC30A6	novel	4758	13	NA	NA	-8	-6	no_combination_of_known_junctions	FALSE	canonical	1	1516	junction_5	51056.184067162714	NA	3	NA	TRUE	NA	NA	NA	C	coding	434	1305	46	1350	15.0	-1547	False	ATTAAA	-27
PB.1369.7	chr10	-	2889	7	novel_not_in_catalog	ZNF248	novel	518	7	NA	NA	-38	-207	intron_retention	FALSE	canonical	1	1588	junction_6	55483.00369908087	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	219	578	20.0	409	False	AATAAA	-17
PB.1369.1	chr10	-	4958	6	full-splice_match	ZNF248	ENST00000395867.7	5141	6	-18	201	8	-201	multi-exon	FALSE	canonical	1	39558	junction_5	45712.847934032725	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	570	2309	10.0	-19	True	AATAAA	-23
PB.1369.2	chr10	-	1695	8	novel_not_in_catalog	ZNF248	novel	518	7	NA	NA	-10	-201	any annotated donor/acceptor	FALSE	canonical	1	9558	junction_1	53430.20763002663	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	562	921	10.0	-11	True	AATAAA	-23
PB.1369.3	chr10	-	3234	7	full-splice_match	ZNF248	ENST00000374648.7	1286	7	-62	-1886	-10	-205	multi-exon	FALSE	canonical	1	39558	junction_6	45474.37427979508	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	562	921	15.0	-11	True	AATAAA	-19
PB.6535.23	chr2	-	1768	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	-19	2898	0	-25	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	231	1391	65.0	88	False	TTTAAA	-7
PB.9178.1	chr5	+	1457	10	full-splice_match	SKP2	ENST00000274254.9	1537	10	78	2	0	1	multi-exon	FALSE	canonical	1	186701	junction_9	128960.30862935222	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	197	1429	25.0	0	True	AATAAA	-28
PB.9178.2	chr5	+	3351	9	novel_in_catalog	SKP2	novel	1537	10	NA	NA	0	-6	intron_retention	FALSE	canonical	1	15360	junction_2	185923.18765886727	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	592	1359	45.0	0	True	AATAAA	-12
PB.9178.3	chr5	+	3416	10	full-splice_match	SKP2	ENST00000274255.10	3759	10	48	295	-7	-5	multi-exon	FALSE	canonical	1	245218	junction_9	117978.36915906279	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	149	1423	50.0	4	True	AATAAA	-13
PB.9541.6	chr5	-	1586	6	full-splice_match	YIPF5	ENST00000274496.9	3147	6	-3	1564	-3	-450	multi-exon	FALSE	canonical	1	523994	junction_2	73685.94738103054	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	139	912	85.0	-11	True	NA	NA
PB.5572.1	chr19	-	2672	14	novel_in_catalog	PCSK4	novel	2358	14	NA	NA	-2	0	intron_retention	FALSE	canonical	1	8567	junction_4	9623.72851019135	NA	0	NA	TRUE	NA	NA	NA	A	coding	652	1959	383	2341	5.0	1	True	AATAAA	-17
PB.6535.20	chr2	-	2237	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	-43	2453	-24	420	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	255	1415	25.0	13	True	TATAAA	-39
PB.2140.19	chr11	-	2226	15	incomplete-splice_match	NUMA1	ENST00000393695.7	7343	27	159	12586	8	-21	3prime_fragment	FALSE	canonical	1	182511	junction_13	267041.37991720816	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2052	174	2225	65.0	5	True	NA	NA
PB.2140.16	chr11	-	7153	26	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	14297	junction_25	394718.938247814	NA	1	NA	TRUE	NA	NA	NA	C	coding	2115	6348	146	6493	25.0	-5	True	AATAAA	-17
PB.2140.17	chr11	-	7099	25	novel_not_in_catalog	NUMA1	novel	2276	7	NA	NA	65	-2	intron_retention	FALSE	canonical	1	132	junction_24	394903.67406840145	NA	3	NA	TRUE	NA	NA	NA	C	coding	2101	6306	134	6439	25.0	7	True	AATAAA	-17
PB.2140.13	chr11	-	5387	21	novel_not_in_catalog	NUMA1	novel	2276	7	NA	NA	6	0	intron_retention	TRUE	non_canonical	0	0	junction_5	523816.95604392904	NA	0	NA	TRUE	NA	NA	NA	C	coding	1313	3942	297	4238	25.0	3	True	AATAAA	-19
PB.2140.10	chr11	-	8430	24	novel_in_catalog	NUMA1	novel	2276	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	197857	junction_23	383029.60014911304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1749	5250	211	5460	25.0	1012	False	AATAAA	-19
PB.2140.11	chr11	-	3301	13	full-splice_match	NUMA1	ENST00000541584.5	3557	13	255	1	255	0	multi-exon	TRUE	canonical	1	29274	junction_8	566322.7250604638	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	45	2639	25.0	NA	False	AATAAA	-19
PB.6560.18	chr2	-	3013	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-13	1885	-2	-1885	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	208	858	75.0	-3	True	CATAAA	-45
PB.6560.19	chr2	-	2828	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-11	2068	0	-2068	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	206	856	50.0	-1	True	NA	NA
PB.11768.13	chr9	+	1827	8	novel_in_catalog	MRRF	novel	1841	6	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	18408	junction_4	53386.31441652057	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	68	598	20.0	6	True	AATAAA	-22
PB.7408.23	chr20	+	3495	13	full-splice_match	SLC17A9	ENST00000370351.8	3580	13	80	5	16	-5	multi-exon	FALSE	canonical	1	76591	junction_5	64843.04355192151	NA	3	NA	TRUE	NA	NA	NA	C	coding	436	1311	105	1415	25.0	18	True	NA	NA
PB.6560.10	chr2	-	4968	7	novel_not_in_catalog	MOB1A	novel	4885	6	NA	NA	-7	-72	any annotated donor/acceptor	FALSE	canonical	1	18379	junction_2	535895.3523309274	NA	2	NA	TRUE	NA	NA	NA	C	coding	232	699	232	930	50.0	-27	False	AATAAA	-14
PB.6560.12	chr2	-	4725	5	novel_in_catalog	MOB1A	novel	4885	6	NA	NA	0	-77	no_combination_of_known_junctions	FALSE	canonical	1	4072	junction_3	504072.22289934556	NA	5	NA	TRUE	NA	NA	NA	C	coding	130	393	370	762	50.0	-1	True	AATAAA	-9
PB.6535.24	chr2	-	5193	5	novel_in_catalog	C2orf42	novel	579	2	NA	NA	-61	-41581	intron_retention	FALSE	canonical	1	469380	junction_4	56556.63595237963	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	247	585	5.0	72	False	AATAAA	-17
PB.6560.15	chr2	-	4047	7	novel_in_catalog	MOB1A	novel	4885	6	NA	NA	5	-1011	combination_of_known_junctions	FALSE	canonical	1	9777	junction_5	553388.3875826573	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	242	1018	20.0	4	True	AATAAA	-16
PB.6560.16	chr2	-	3891	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-17	1011	-6	-1011	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	3	NA	TRUE	NA	NA	NA	C	coding	216	651	212	862	20.0	-7	True	AATAAA	-16
PB.6560.17	chr2	-	3272	6	full-splice_match	MOB1A	ENST00000396049.4	4885	6	-17	1630	-6	-1630	multi-exon	FALSE	canonical	1	711638	junction_5	215001.77094117156	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	212	862	15.0	-7	True	NA	NA
PB.5489.8	chr18	-	2873	1	novel_in_catalog	TCF4	novel	8140	18	NA	NA	8	13112	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	13	True	NA	NA
PB.6920.13	chr2	-	4272	28	full-splice_match	ANKRD44	ENST00000647377.1	7218	28	-153	3099	-2	-2286	multi-exon	FALSE	canonical	1	50026	junction_1	39916.89022987816	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	196	3366	70.0	26	False	NA	NA
PB.4328.10	chr16	-	3721	23	incomplete-splice_match	GTF3C1	ENST00000356183.8	7018	37	-16	27560	-9	-5100	3prime_fragment	FALSE	canonical	1	202573	junction_22	71236.0289808372	NA	0	NA	TRUE	NA	NA	NA	C	coding	1229	3687	33	3719	45.0	-24	True	NA	NA
PB.4328.11	chr16	-	2348	14	incomplete-splice_match	GTF3C1	ENST00000356183.8	7018	37	-40	37017	-33	-14557	3prime_fragment	FALSE	canonical	1	202573	junction_13	72307.44304024139	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2292	57	2348	70.0	-48	False	NA	NA
PB.6402.1	chr2	+	2611	14	full-splice_match	SLC30A6	ENST00000282587.9	5089	14	-23	2501	0	138	multi-exon	FALSE	canonical	1	91258	junction_1	29624.684274751322	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	61	1446	20.0	-1562	False	AATGAA	-24
PB.5489.1	chr18	-	2033	13	full-splice_match	TCF4	ENST00000570287.6	3163	13	116	1014	-35	21	multi-exon	FALSE	canonical	1	160865	junction_12	88311.93570815235	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	160	1656	65.0	-13	True	AATATA	-18
PB.661.2	chr1	+	3206	10	novel_in_catalog	SRGAP2C	novel	7204	10	NA	NA	164	1026	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	118976.95161087833	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	693	2069	40.0	NA	False	NA	NA
PB.5489.3	chr18	-	1497	11	incomplete-splice_match	TCF4	ENST00000570287.6	3163	13	119	2222	-32	-606	3prime_fragment	FALSE	canonical	1	160865	junction_10	72220.57758450843	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1368	130	1497	25.0	-10	True	NA	NA
PB.5489.2	chr18	-	1786	13	full-splice_match	TCF4	ENST00000457482.7	2372	13	405	181	-7	0	multi-exon	FALSE	canonical	1	160865	junction_12	79094.17066910389	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	80	1615	85.0	23	True	NA	NA
PB.3605.20	chr14	+	3381	16	novel_in_catalog	ZC3H14	novel	18281	17	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	11730	junction_8	159756.20862796606	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	99	2153	80.0	-27	True	AATAAA	-35
PB.3605.21	chr14	+	2444	17	full-splice_match	ZC3H14	ENST00000251038.9	18281	17	127	15710	-2	0	multi-exon	FALSE	canonical	1	281539	junction_10	115875.09142065905	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	99	2309	25.0	-27	True	AATATA	-34
PB.5489.7	chr18	-	3514	8	incomplete-splice_match	TCF4	ENST00000457482.7	2372	13	386	24268	-1	2553	3prime_fragment	FALSE	canonical	1	160865	junction_7	68793.22858169892	NA	4	NA	TRUE	NA	NA	NA	C	coding	300	903	126	1028	95.0	4	True	AATAAA	-21
PB.5489.6	chr18	-	6067	7	novel_in_catalog	TCF4	novel	8140	18	NA	NA	4	2554	intron_retention	FALSE	canonical	1	160865	junction_6	74151.22076634268	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	121	849	95.0	9	True	AATAAA	-22
PB.11768.12	chr9	+	2209	7	novel_in_catalog	MRRF	novel	1841	6	NA	NA	4	-6	intron_retention	FALSE	canonical	1	80395	junction_1	36507.865269768314	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	77	553	35.0	-3	True	AATAAA	-37
PB.10976.3	chr8	+	2073	7	full-splice_match	ERI1	ENST00000250263.7	4615	7	108	2434	-17	-2433	multi-exon	FALSE	canonical	1	154351	junction_1	25092.211793037826	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	153	1202	25.0	15	True	AATAAA	-19
PB.2882.2	chr12	-	1184	4	full-splice_match	ALKBH2	ENST00000429722.2	1159	4	-18	-7	-5	-1	multi-exon	FALSE	canonical	1	111670	junction_3	76929.83774120994	NA	0	NA	TRUE	NA	NA	NA	A	coding	261	786	383	1168	0.0	-6	True	AATAAA	-16
PB.11932.14	chr9	+	3293	20	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	-2	-31	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	102669.66527987437	NA	1	1	TRUE	NA	NA	NA	C	coding	835	2508	29	2536	80.0	-10	True	AATAAA	-36
PB.906.1	chr1	-	3711	2	intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5007	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-13	True	NA	NA
PB.6433.9	chr2	-	2849	1	novel_in_catalog	THUMPD2	novel	1970	10	NA	NA	7	-6395	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-14	True	NA	NA
PB.3996.1	chr15	+	4209	2	full-splice_match	SNX33	ENST00000308527.5	8008	2	123	3676	123	-5	multi-exon	FALSE	canonical	1	163698	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	574	1725	1075	2799	50.0	-14	False	GATAAA	-13
PB.5361.1	chr18	-	1716	16	full-splice_match	ENOSF1	ENST00000251101.11	1867	16	2	149	2	-7	multi-exon	FALSE	canonical	1	121678	junction_15	74395.08814598508	NA	0	NA	TRUE	NA	NA	NA	A	coding	443	1332	88	1419	50.0	-45	True	ATTAAA	-11
PB.8515.9	chr3	+	3566	7	novel_in_catalog	SKIL	novel	554	2	NA	NA	-5	212	intron_retention	FALSE	canonical	1	2045	junction_1	120027.88663392169	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	770	2824	10.0	6	True	AATAAA	-15
PB.6433.2	chr2	-	2094	11	full-splice_match	THUMPD2	ENST00000378727.8	2089	11	-2	-3	-2	1	multi-exon	FALSE	canonical	1	40314	junction_10	51078.604546717994	NA	2	1	TRUE	NA	NA	NA	C	coding	303	912	31	942	20.0	-23	True	ATTAAA	-22
PB.6433.1	chr2	-	2207	11	full-splice_match	THUMPD2	ENST00000378727.8	2089	11	-10	-108	-10	106	multi-exon	FALSE	canonical	1	40314	junction_10	51078.604546717994	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	39	950	55.0	-31	True	NA	NA
PB.8242.18	chr3	+	5847	5	incomplete-splice_match	ZNF654	ENST00000636215.1	6446	9	69531	7	-10307	-6	5prime_fragment	FALSE	canonical	1	66356	junction_3	7431.38072635227	NA	5	NA	TRUE	NA	NA	NA	C	coding	916	2751	91	2841	35.0	NA	False	AATAAA	-15
PB.6433.6	chr2	-	1968	10	full-splice_match	THUMPD2	ENST00000505747.5	1970	10	0	2	0	0	multi-exon	FALSE	canonical	1	40314	junction_9	51467.47327687821	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	29	1540	25.0	-21	True	ATTAAA	-19
PB.6433.5	chr2	-	2361	12	novel_in_catalog	THUMPD2	novel	3148	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	4065	junction_9	64473.50189005512	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	1199	1933	25.0	-12	True	ATTAAA	-19
PB.9545.12	chr5	+	4574	21	full-splice_match	TCERG1	ENST00000394421.6	3633	21	-10	-931	-10	-7	multi-exon	FALSE	canonical	1	212876	junction_11	118884.97683571083	NA	2	NA	TRUE	NA	NA	NA	C	coding	1077	3234	29	3262	55.0	-11	True	AATAAA	-7
PB.11768.11	chr9	+	1714	7	full-splice_match	MRRF	ENST00000344641.7	9826	7	230	7882	-1	0	multi-exon	FALSE	canonical	1	80395	junction_1	36995.207292071405	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	82	870	20.0	-8	True	AATAAA	-23
PB.766.1	chr1	+	3868	30	full-splice_match	INTS3	ENST00000318967.6	5235	30	638	729	222	0	multi-exon	FALSE	canonical	1	325249	junction_1	129803.62620475932	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	114	3059	5.0	655	False	AATAAA	-16
PB.11050.45	chr8	+	3812	7	incomplete-splice_match	PTK2B	ENST00000517339.5	3914	29	51053	-1	-4352	1	5prime_fragment	FALSE	canonical	1	472607	junction_2	174606.56602933223	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	2314	2934	0.0	4233	False	ATTAAA	-16
PB.4427.10	chr16	+	9478	38	novel_in_catalog	CHD9	novel	11509	39	NA	NA	1	14	intron_retention	FALSE	canonical	1	64058	junction_1	33452.23138720424	NA	0	NA	TRUE	NA	NA	NA	B	coding	2391	7176	328	7503	90.0	-4	True	NA	NA
PB.11932.15	chr9	+	3502	19	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	2730	junction_18	121468.72904041782	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2730	25	2754	45.0	-6	True	ATTAAA	-22
PB.4427.12	chr16	+	3045	4	incomplete-splice_match	CHD9	ENST00000564641.1	589	5	3440	-2729	3440	14	5prime_fragment	FALSE	canonical	1	6792	junction_1	78474.81186271738	NA	1	NA	TRUE	NA	NA	NA	B	coding	285	858	213	1070	90.0	NA	False	NA	NA
PB.766.3	chr1	+	4658	31	novel_in_catalog	INTS3	novel	5235	30	NA	NA	-63	-1	intron_retention	FALSE	canonical	1	36257	junction_14	179326.53533218542	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	2183	3850	5.0	-46	False	AATAAA	-15
PB.11555.2	chr9	-	5006	21	novel_in_catalog	CNTNAP3	novel	5064	24	NA	NA	-166	-2	no_combination_of_known_junctions	FALSE	canonical	1	157	junction_18	19920.502728282234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1155	3468	418	3885	30.0	NA	False	ATTAAA	-16
PB.7724.2	chr22	+	4788	4	full-splice_match	SLC5A4-AS1	ENST00000434942.1	876	4	29	-3941	29	3941	multi-exon	FALSE	canonical	1	8923	junction_2	4958.014185807325	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	1110	1703	35.0	-2	True	TATAAA	-8
PB.7724.1	chr22	+	5121	5	novel_in_catalog	SLC5A4-AS1	novel	876	4	NA	NA	9	7431	no_combination_of_known_junctions	FALSE	canonical	1	6515	junction_4	5152.148726502371	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	1130	1723	10.0	-22	True	ATTAAA	-16
PB.766.2	chr1	+	6138	28	novel_in_catalog	INTS3	novel	5235	30	NA	NA	-93	6	intron_retention	FALSE	canonical	1	325249	junction_1	125384.19235528498	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2511	2813	5323	10.0	-76	False	AATAAA	-22
PB.7419.1	chr20	-	2133	1	novel_in_catalog	STMN3	novel	2351	5	NA	NA	10553	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	218	657	1056	1712	10.0	811	False	AATAAA	-21
PB.7419.2	chr20	-	2251	5	full-splice_match	STMN3	ENST00000370053.2	2255	5	4	0	4	0	multi-exon	FALSE	canonical	1	269534	junction_1	171995.95313898378	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	79	621	10.0	0	True	AATAAA	-22
PB.11152.20	chr8	-	4451	23	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-3	-674	no_combination_of_known_junctions	FALSE	canonical	1	54781	junction_12	826876.3015309372	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	220	2322	20.0	1	True	AATAAA	-17
PB.2558.3	chr12	-	1985	4	novel_in_catalog	PLEKHA8P1	novel	1839	3	NA	NA	1	-41	combination_of_known_junctions	FALSE	canonical	1	3537	junction_1	17927.374865148424	NA	1	1	TRUE	NA	NA	NA	C	coding	391	1176	725	1900	85.0	-2	True	AATAAA	-12
PB.2558.2	chr12	-	3587	3	full-splice_match	PLEKHA8P1	ENST00000545609.2	277	3	13	-3323	-2	-40	multi-exon	FALSE	canonical	1	37490	junction_1	3570.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	2326	3501	90.0	-5	True	AATAAA	-13
PB.2558.1	chr12	-	3873	3	full-splice_match	PLEKHA8P1	ENST00000545609.2	277	3	17	-3613	2	250	multi-exon	FALSE	canonical	1	37490	junction_1	3570.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	2322	3497	40.0	-1	True	AATAAA	-23
PB.766.4	chr1	+	5251	30	full-splice_match	INTS3	ENST00000318967.6	5235	30	-17	1	-17	-1	multi-exon	FALSE	canonical	1	325249	junction_1	129803.62620475932	NA	3	NA	TRUE	NA	NA	NA	C	coding	1042	3129	586	3714	15.0	0	True	ATTAAA	-16
PB.970.6	chr1	-	4501	7	novel_not_in_catalog	AL162431.2	novel	2424	2	NA	NA	-46405	-28988	any annotated donor/acceptor	FALSE	canonical	1	12615	junction_5	121530.65867645634	NA	2	NA	TRUE	NA	NA	NA	B	coding	154	465	497	961	25.0	-19	True	AATAAA	-26
PB.1173.3	chr1	+	5702	1	novel_in_catalog	SNAP47	novel	2375	3	NA	NA	-6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	122	369	2698	3066	100.0	16	True	NA	NA
PB.970.2	chr1	-	4868	8	full-splice_match	STX6	ENST00000258301.5	4851	8	-14	-3	-14	3	multi-exon	FALSE	canonical	1	284881	junction_2	32878.787382053575	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	253	1020	45.0	-57	True	AATAAA	-19
PB.970.3	chr1	-	4498	8	full-splice_match	STX6	ENST00000258301.5	4851	8	14	339	14	-25	multi-exon	FALSE	canonical	1	284881	junction_2	32878.787382053575	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	225	992	80.0	-29	True	TTTAAA	-19
PB.5516.17	chr18	-	2911	3	incomplete-splice_match	CDH19	ENST00000540086.5	1963	10	-56	61253	-6	5712	3prime_fragment	FALSE	canonical	1	10770	junction_2	1141.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	304	807	95.0	-12	True	NA	NA
PB.970.1	chr1	-	2158	8	novel_in_catalog	AL162431.2	novel	2424	2	NA	NA	-46432	-5651	no_combination_of_known_junctions	FALSE	canonical	1	7655	junction_1	114795.3105745978	NA	0	NA	TRUE	NA	NA	NA	B	coding	271	816	242	1057	15.0	-46	True	AATAAA	-20
PB.970.8	chr1	-	4372	8	full-splice_match	STX6	ENST00000258301.5	4851	8	50	429	50	-115	multi-exon	FALSE	canonical	1	284881	junction_2	32878.787382053575	NA	33	NA	TRUE	NA	NA	NA	C	coding	255	768	189	956	10.0	7	True	NA	NA
PB.970.9	chr1	-	4299	7	novel_not_in_catalog	AL162431.2	novel	2424	2	NA	NA	-46326	-29111	any annotated donor/acceptor	FALSE	canonical	1	12615	junction_5	121530.65867645634	NA	1	NA	TRUE	NA	NA	NA	B	coding	154	465	418	882	10.0	60	False	NA	NA
PB.2345.1	chr11	-	2383	4	full-splice_match	MSANTD2	ENST00000374979.7	2349	4	-16	-18	-15	0	multi-exon	FALSE	canonical	1	12515	junction_3	43854.80587119273	NA	1	NA	TRUE	NA	NA	NA	A	coding	559	1680	26	1705	15.0	-2	True	ATTAAA	-14
PB.10992.10	chr8	+	3544	10	full-splice_match	TUSC3	ENST00000382020.8	3683	10	41	98	-15	-98	multi-exon	FALSE	canonical	1	394118	junction_1	166924.7619308002	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	168	1211	35.0	1	True	TATAAA	-15
PB.9414.1	chr5	+	1968	7	full-splice_match	SNX24	ENST00000261369.8	2158	7	161	29	5	-29	multi-exon	FALSE	canonical	1	106796	junction_6	35219.05893475861	NA	3	NA	TRUE	NA	NA	NA	A	coding	169	510	25	534	70.0	-3	True	TTTAAA	-31
PB.9186.10	chr5	-	4153	34	full-splice_match	NUP155	ENST00000513532.1	4088	34	-4	-61	-4	0	multi-exon	FALSE	canonical	1	5630	junction_12	95251.5587103109	NA	1	NA	TRUE	NA	NA	NA	C	coding	1318	3957	136	4092	30.0	4	True	AATAAA	-18
PB.1183.2	chr1	+	1565	5	novel_not_in_catalog	RNF187	novel	3017	4	NA	NA	-94	-798	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	823622.352624179	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	102	482	5.0	1	True	AATAAA	-14
PB.1183.1	chr1	+	1721	4	full-splice_match	RNF187	ENST00000639044.1	708	4	70	-1083	70	-798	multi-exon	FALSE	canonical	1	720506	junction_1	574614.9338193554	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	258	638	5.0	-6961	False	AATAAA	-14
PB.1373.5	chr10	+	4859	8	full-splice_match	ZNF37A	ENST00000351773.7	7027	8	25	2143	10	-2143	multi-exon	FALSE	canonical	1	20691	junction_2	50077.51086840789	NA	2	NA	TRUE	NA	NA	NA	C	coding	561	1686	806	2491	90.0	-4	True	NA	NA
PB.1373.4	chr10	+	4093	8	novel_in_catalog	ZNF37A	novel	4448	8	NA	NA	4	-2926	combination_of_known_junctions	FALSE	canonical	1	20691	junction_2	47118.101928958844	NA	4	NA	TRUE	NA	NA	NA	C	coding	561	1686	823	2508	85.0	-25	True	NA	NA
PB.1373.6	chr10	+	4675	8	novel_in_catalog	ZNF37A	novel	4448	8	NA	NA	10	-2143	combination_of_known_junctions	FALSE	canonical	1	30815	junction_1	42530.15552978563	NA	3	NA	TRUE	NA	NA	NA	C	coding	561	1686	622	2307	90.0	-4	True	NA	NA
PB.1373.1	chr10	+	5276	7	novel_in_catalog	ZNF37A	novel	4448	8	NA	NA	-1	-1276	combination_of_known_junctions	FALSE	canonical	1	33455	junction_1	42642.59104333235	NA	3	NA	TRUE	NA	NA	NA	C	coding	561	1686	356	2041	65.0	-32	True	NA	NA
PB.1373.3	chr10	+	4405	7	novel_in_catalog	ZNF37A	novel	4448	8	NA	NA	1	-2143	combination_of_known_junctions	FALSE	canonical	1	33455	junction_1	42642.59104333235	NA	3	NA	TRUE	NA	NA	NA	C	coding	561	1686	352	2037	90.0	-28	True	NA	NA
PB.1373.2	chr10	+	3918	8	novel_in_catalog	ZNF37A	novel	4448	8	NA	NA	1	-2926	combination_of_known_junctions	FALSE	canonical	1	30815	junction_1	42530.15552978563	NA	3	NA	TRUE	NA	NA	NA	C	coding	561	1686	648	2333	85.0	-30	True	NA	NA
PB.12303.17	chrX	-	5174	9	full-splice_match	IDS	ENST00000340855.10	7619	9	41	2404	-26	-2404	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	170	1822	80.0	-1	True	NA	NA
PB.12303.16	chrX	-	5277	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	-2404	combination_of_known_junctions	FALSE	canonical	1	56236	junction_7	416552.350987318	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	906	1925	80.0	-1	True	NA	NA
PB.12303.15	chrX	-	5339	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	6	-2404	combination_of_known_junctions	FALSE	canonical	1	56250	junction_3	411700.0325144451	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	205	1143	80.0	-36	True	NA	NA
PB.12303.14	chrX	-	5402	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	-4	-2047	no_combination_of_known_junctions	FALSE	canonical	1	43426	junction_1	379955.59974082257	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	215	1693	85.0	-46	False	NA	NA
PB.12303.13	chrX	-	5502	9	novel_not_in_catalog	IDS	novel	7619	9	NA	NA	26	-2047	any annotated donor/acceptor	FALSE	canonical	1	10179	junction_7	352850.36085596896	NA	6	NA	TRUE	NA	NA	NA	C	coding	460	1383	411	1793	85.0	-16	True	NA	NA
PB.12303.12	chrX	-	5634	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	-2047	combination_of_known_junctions	FALSE	canonical	1	56236	junction_7	416552.350987318	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	906	1925	85.0	-1	True	NA	NA
PB.12303.11	chrX	-	5543	9	full-splice_match	IDS	ENST00000340855.10	7619	9	29	2047	29	-2047	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	182	1834	85.0	-13	True	NA	NA
PB.12303.10	chrX	-	5661	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	-2047	combination_of_known_junctions	FALSE	canonical	1	56250	junction_3	411700.0325144451	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	170	1108	85.0	-1	True	NA	NA
PB.260.3	chr1	+	2005	5	full-splice_match	ZBTB8A	ENST00000316459.4	1943	5	1	-63	1	63	multi-exon	FALSE	canonical	1	18297	junction_4	21386.244235489317	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	227	1249	80.0	-11	True	NA	NA
PB.11687.8	chr9	+	4967	18	novel_in_catalog	INVS	novel	3709	17	NA	NA	-1	1174	intron_retention	FALSE	canonical	1	8393	junction_3	37151.57291337362	NA	2	NA	TRUE	NA	NA	NA	C	coding	958	2877	591	3467	25.0	17	True	AATAAA	-15
PB.9841.1	chr6	+	2602	7	novel_not_in_catalog	HLA-L	novel	1765	6	NA	NA	-26	2251	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	351410.50114617456	NA	2	NA	TRUE	NA	NA	NA	B	coding	207	624	567	1190	30.0	-6	True	AATAAA	-15
PB.7657.1	chr22	-	3101	1	novel_in_catalog	DDT	novel	713	3	NA	NA	-13	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3687	False	AATAAA	-22
PB.7657.2	chr22	-	2719	2	full-splice_match	DDT	ENST00000444947.2	1048	2	37	-1708	5	-3	multi-exon	FALSE	canonical	1	13746	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	41	379	30.0	-3669	False	AATAAA	-21
PB.9841.2	chr6	+	5085	6	novel_not_in_catalog	HLA-L	novel	1765	6	NA	NA	-25	-1109	intron_retention	FALSE	non_canonical	0	0	junction_5	377782.1176156436	NA	6	NA	TRUE	NA	NA	NA	B	coding	128	387	67	453	25.0	-5	True	CATAAA	-17
PB.7752.1	chr22	-	3800	3	novel_not_in_catalog	SSTR3	novel	4100	2	NA	NA	-8409	1	any annotated donor/acceptor	TRUE	canonical	1	12	junction_1	4281.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	418	1257	234	1490	15.0	9459	False	AATAAA	-16
PB.10044.21	chr6	+	4471	15	full-splice_match	ZNF451	ENST00000370706.8	5268	15	182	615	3	-509	multi-exon	FALSE	canonical	1	105223	junction_1	38397.62169107108	NA	0	NA	TRUE	NA	NA	NA	C	coding	1061	3186	63	3248	20.0	0	True	NA	NA
PB.8242.14	chr3	+	6129	7	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-25	-2	no_combination_of_known_junctions	FALSE	canonical	1	10244	junction_3	27712.29195030409	NA	3	NA	TRUE	NA	NA	NA	C	coding	1015	3048	72	3119	30.0	-17	True	AATAAA	-19
PB.5194.2	chr17	-	3607	27	novel_not_in_catalog	AC004805.1	novel	1616	7	NA	NA	-550923	-97439	any annotated donor/acceptor	FALSE	canonical	1	14889	junction_26	11703.208173162551	NA	0	NA	TRUE	NA	NA	NA	B	coding	956	2871	307	3177	20.0	176	False	ATTAAA	-17
PB.5194.3	chr17	-	3112	27	full-splice_match	CEP112	ENST00000535342.6	3392	27	4	276	4	2	multi-exon	FALSE	canonical	1	24610	junction_26	9918.210810820156	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	88	2955	10.0	0	True	CATAAA	-22
PB.5194.1	chr17	-	3431	27	novel_not_in_catalog	AC004805.1	novel	1616	7	NA	NA	-551083	-97437	any annotated donor/acceptor	FALSE	canonical	1	22322	junction_20	10733.574100269505	NA	1	NA	TRUE	NA	NA	NA	B	coding	956	2871	129	2999	15.0	16	False	ATTAAA	-19
PB.11397.1	chr8	-	2955	16	full-splice_match	BOP1	ENST00000569669.5	2303	16	-45	-607	-45	607	multi-exon	FALSE	canonical	1	151	junction_3	228478.9940015979	NA	5	1	TRUE	NA	NA	NA	C	coding	746	2241	46	2286	35.0	22	True	NA	NA
PB.5194.4	chr17	-	2437	21	incomplete-splice_match	CEP112	ENST00000535342.6	3392	27	-14	216328	-9	2	3prime_fragment	FALSE	canonical	1	24610	junction_20	10574.72377547045	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2331	106	2436	55.0	-18	True	AATAAA	-17
PB.11701.7	chr9	+	3829	10	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	22	2301	no_combination_of_known_junctions	FALSE	canonical	1	5222	junction_9	21755.34858260417	NA	14	1	TRUE	NA	NA	NA	C	coding	317	954	155	1108	10.0	-56	True	ATTAAA	-14
PB.1122.2	chr1	+	3619	18	full-splice_match	KCTD3	ENST00000259154.8	3931	18	291	21	291	-21	multi-exon	FALSE	canonical	1	143433	junction_1	107125.14507107223	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	4	2451	55.0	-6098	False	ATTAAA	-3
PB.11237.5	chr8	+	3903	28	full-splice_match	TMEM67	ENST00000453321.7	4651	28	58	690	3	607	multi-exon	FALSE	canonical	1	40260	junction_6	10562.076234792796	NA	1	NA	TRUE	NA	NA	NA	C	coding	985	2958	31	2988	65.0	12	True	NA	NA
PB.4469.4	chr16	-	2307	10	full-splice_match	GOT2	ENST00000245206.9	2462	10	153	2	98	-2	multi-exon	FALSE	canonical	1	279907	junction_7	272949.5308257554	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	88	1269	35.0	779	False	AATAAA	-15
PB.4469.5	chr16	-	2279	9	novel_in_catalog	GOT2	novel	2462	10	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	3968	junction_3	357716.73950101127	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	100	813	35.0	-12	True	AATAAA	-15
PB.5027.3	chr17	-	3411	12	novel_in_catalog	MPP2	novel	4206	12	NA	NA	-32	-4	combination_of_known_junctions	FALSE	canonical	1	2642	junction_10	35016.89810613165	NA	2	NA	TRUE	NA	NA	NA	C	coding	563	1692	79	1770	40.0	-9	True	AATAAA	-15
PB.5027.2	chr17	-	3481	12	full-splice_match	MPP2	ENST00000377184.7	4206	12	-57	782	-57	23	multi-exon	FALSE	canonical	1	23843	junction_11	24564.75115531021	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	104	1813	25.0	7083	False	AATAAA	-42
PB.9212.9	chr5	-	2723	1	novel_in_catalog	TMEM267	novel	2338	3	NA	NA	8	-34785	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	98	297	3	299	100.0	9	True	NA	NA
PB.4469.1	chr16	-	3768	8	novel_in_catalog	GOT2	novel	2462	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	279907	junction_5	197124.24366735964	NA	3	NA	TRUE	NA	NA	NA	C	coding	261	786	89	874	35.0	-1	True	AATAAA	-15
PB.4469.2	chr16	-	3542	9	novel_in_catalog	GOT2	novel	2462	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	279907	junction_6	234485.1290871129	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	89	1432	35.0	-1	True	AATAAA	-15
PB.4469.3	chr16	-	3225	7	novel_in_catalog	GOT2	novel	2462	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	4807	junction_1	305847.78978680266	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	89	817	35.0	-1	True	AATAAA	-15
PB.11426.5	chr9	+	3010	7	novel_in_catalog	SMARCA2	novel	5855	33	NA	NA	0	0	intron_retention	FALSE	canonical	1	44343	junction_1	252551.84973612623	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	1300	2178	20.0	0	True	AATAAA	-15
PB.3618.2	chr14	-	8013	31	novel_in_catalog	CCDC88C	novel	3617	7	NA	NA	-30	0	intron_retention	FALSE	canonical	1	44509	junction_6	33879.20691607497	NA	3	NA	TRUE	NA	NA	NA	A	coding	1535	4608	185	4792	10.0	-61	True	AATAAA	-15
PB.4660.3	chr17	-	4196	15	novel_in_catalog	TSR1	novel	5188	15	NA	NA	0	106	intron_retention	FALSE	canonical	1	7316	junction_11	256688.86708808446	NA	1	NA	TRUE	NA	NA	NA	C	coding	788	2367	31	2397	15.0	-4	True	AATAAA	-17
PB.4660.2	chr17	-	4146	14	novel_not_in_catalog	TSR1	novel	5188	15	NA	NA	0	108	intron_retention	FALSE	canonical	1	14302	junction_11	297233.2430487713	NA	2	1	TRUE	NA	NA	NA	C	coding	574	1725	621	2345	15.0	-4	True	AATAAA	-19
PB.4660.1	chr17	-	4247	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1052	-111	2	111	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	29	2443	20.0	-2	True	AATAAA	-22
PB.5176.5	chr17	+	3844	18	full-splice_match	DDX42	ENST00000389924.6	3939	18	10	85	9	-15	multi-exon	FALSE	canonical	1	397811	junction_1	195156.28141359784	NA	2	NA	TRUE	NA	NA	NA	C	coding	938	2817	195	3011	15.0	12	True	TATAAA	-20
PB.5176.2	chr17	+	2162	16	incomplete-splice_match	DDX42	ENST00000389924.6	3939	18	-21	3719	-21	-373	3prime_fragment	FALSE	canonical	1	397811	junction_1	164839.36016829638	NA	2	NA	TRUE	NA	NA	NA	C	coding	645	1935	226	2160	60.0	-19	True	NA	NA
PB.5176.3	chr17	+	3921	19	full-splice_match	DDX42	ENST00000578681.5	4337	19	307	109	-19	-1	multi-exon	FALSE	canonical	1	80362	junction_1	282929.3024764848	NA	2	NA	TRUE	NA	NA	NA	C	coding	938	2817	295	3111	70.0	-17	True	NA	NA
PB.4660.5	chr17	-	3660	13	incomplete-splice_match	TSR1	ENST00000301364.9	5188	15	1829	195	765	-195	5prime_fragment	FALSE	canonical	1	333052	junction_5	200111.44360585886	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	45	2162	90.0	775	False	NA	NA
PB.4660.4	chr17	-	4108	15	full-splice_match	TSR1	ENST00000301364.9	5188	15	1064	16	0	-16	multi-exon	FALSE	canonical	1	331944	junction_14	204294.68726074178	NA	2	NA	TRUE	NA	NA	NA	C	coding	804	2415	17	2431	80.0	10	True	NA	NA
PB.8393.5	chr3	+	2855	18	novel_not_in_catalog	IFT122	novel	4414	31	NA	NA	2	1817	any annotated donor/acceptor	FALSE	canonical	1	4000	junction_17	39091.924757760855	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	97	2190	15.0	-12	True	NA	NA
PB.6968.3	chr2	+	839	7	full-splice_match	EEF1B2	ENST00000392221.5	880	7	41	0	-1	0	multi-exon	FALSE	canonical	1	10377	junction_4	437444.06625206256	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	118	795	15.0	10	True	AATAAA	-14
PB.3229.1	chr13	+	4058	2	full-splice_match	RAP2A	ENST00000245304.4	5487	2	289	1140	40	-1140	multi-exon	FALSE	canonical	1	344541	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	117	354	159	512	20.0	299	False	AATAAA	-12
PB.4660.8	chr17	-	3839	14	novel_in_catalog	TSR1	novel	5188	15	NA	NA	0	-195	intron_retention	FALSE	canonical	1	22827	junction_13	254237.70544344507	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	224	2341	90.0	-4	True	NA	NA
PB.5176.8	chr17	+	4006	19	full-splice_match	DDX42	ENST00000578681.5	4337	19	330	1	3	0	multi-exon	FALSE	canonical	1	80362	junction_1	282929.3024764848	NA	2	NA	TRUE	NA	NA	NA	C	coding	938	2817	272	3088	15.0	6	True	AGTAAA	-16
PB.9571.18	chr5	-	2509	24	novel_in_catalog	ANXA6	novel	451	4	NA	NA	-62	-1	combination_of_known_junctions	FALSE	canonical	1	41075	junction_23	902912.4762044336	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	30	2171	35.0	-8	False	AAAACA	-18
PB.539.2	chr1	+	1027	8	full-splice_match	RPL5	ENST00000370321.8	1028	8	0	1	0	0	multi-exon	FALSE	canonical	1	94364	junction_6	2678714.1691128523	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	76	969	20.0	0	True	AATAAA	-17
PB.5516.10	chr18	-	5258	11	incomplete-splice_match	CDH19	ENST00000262150.6	6341	12	19	4756	19	-794	3prime_fragment	FALSE	canonical	1	10770	junction_10	2126.8120956022417	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	275	2110	30.0	-6	True	NA	NA
PB.8975.3	chr4	+	2116	15	incomplete-splice_match	HSPA4L	ENST00000508776.5	3020	20	456	10244	-45	2277	internal_fragment	FALSE	canonical	1	116967	junction_2	24544.569599329432	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1842	275	2116	60.0	-45	True	NA	NA
PB.7760.3	chr22	+	3251	13	incomplete-splice_match	TRIOBP	ENST00000403663.6	2324	14	74	17	-15	-17	intron_retention	FALSE	canonical	1	204946	junction_1	169960.6791425103	NA	3	NA	TRUE	NA	NA	NA	C	coding	593	1782	109	1890	90.0	-4693	False	AAAACA	-12
PB.7760.2	chr22	+	2240	14	full-splice_match	TRIOBP	ENST00000403663.6	2324	14	67	17	-22	-17	multi-exon	FALSE	canonical	1	204946	junction_1	163299.2984070921	NA	4	1	TRUE	NA	NA	NA	C	coding	593	1782	116	1897	90.0	-4700	False	AAAACA	-12
PB.7760.1	chr22	+	3219	13	novel_not_in_catalog	TRIOBP	novel	10145	24	NA	NA	-22	-17	intron_retention	TRUE	canonical	1	73751	junction_2	207337.91308085027	NA	3	NA	TRUE	NA	NA	NA	C	coding	580	1743	116	1858	90.0	-4700	False	AAAACA	-12
PB.7110.70	chr2	+	3487	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-139	-1	combination_of_known_junctions	FALSE	canonical	1	56649	junction_1	997498.777650889	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	316	1401	25.0	-9701	False	AATAAA	-19
PB.7110.71	chr2	+	3553	15	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	1138836.0736721796	NA	5	NA	TRUE	NA	NA	NA	C	coding	313	942	380	1321	25.0	-6	True	AATAAA	-20
PB.7110.72	chr2	+	3432	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	2701	junction_1	1005443.4681240362	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	260	1345	25.0	-5	True	AATAAA	-20
PB.9571.16	chr5	-	1718	17	novel_not_in_catalog	ANXA6	novel	451	4	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	1141381.8850992487	NA	3	2	TRUE	NA	NA	NA	C	coding	280	843	125	967	35.0	0	True	AAAACA	-19
PB.7110.74	chr2	+	3680	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-62	-1	combination_of_known_junctions	FALSE	canonical	1	13151	junction_3	1226941.8536033868	NA	9	NA	TRUE	NA	NA	NA	C	coding	194	585	1010	1594	25.0	-9624	False	AATAAA	-19
PB.7110.75	chr2	+	3260	12	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	3719	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	940772.515496829	NA	3	1	TRUE	NA	NA	NA	C	coding	321	966	210	1175	25.0	-5843	False	AATAAA	-18
PB.11056.1	chr8	+	3249	16	novel_in_catalog	ELP3	novel	545	5	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	1	8946	junction_14	114196.19542220602	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	110	1735	35.0	-40	False	AATAAA	-16
PB.9876.4	chr6	-	1881	1	novel_in_catalog	GPANK1	novel	2793	4	NA	NA	338	-891	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	209	630	370	999	95.0	3746	False	NA	NA
PB.9876.3	chr6	-	1544	4	full-splice_match	GPANK1	ENST00000375906.5	2793	4	392	857	-30	-10	multi-exon	FALSE	canonical	1	26018	junction_3	149561.59491215207	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	294	1364	25.0	-3	True	AATAAA	-18
PB.392.18	chr1	-	1946	7	novel_in_catalog	EFCAB14	novel	5767	11	NA	NA	-96	-2621	combination_of_known_junctions	FALSE	canonical	1	112291	junction_5	174408.40834988115	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	873	1074	1946	50.0	-57	False	AGTAAA	-8
PB.9876.1	chr6	-	1808	4	full-splice_match	GPANK1	ENST00000375895.6	1800	4	-12	4	-1	-4	multi-exon	FALSE	canonical	1	44556	junction_3	143503.06571483257	NA	2	1	TRUE	NA	NA	NA	C	coding	356	1071	552	1622	20.0	-1	True	AATAAA	-24
PB.4680.14	chr17	-	1246	6	full-splice_match	UBE2G1	ENST00000396981.6	3974	6	-44	2772	-44	-51	multi-exon	FALSE	canonical	1	499122	junction_5	170247.27137361118	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	211	723	20.0	-9	True	ATTAAA	-16
PB.5708.8	chr19	+	3701	22	novel_in_catalog	SLC44A2	novel	586	7	NA	NA	-11	0	intron_retention	FALSE	canonical	1	102322	junction_21	339105.6557470105	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	33	2162	5.0	42	True	AATAAA	-19
PB.11739.2	chr9	-	3294	11	novel_in_catalog	ALAD	novel	3173	12	NA	NA	5	5	intron_retention	FALSE	canonical	1	305348	junction_9	41510.75737926255	NA	4	NA	TRUE	NA	NA	NA	C	coding	160	483	824	1306	15.0	9346	False	NA	NA
PB.11286.10	chr8	+	3546	6	full-splice_match	FZD6	ENST00000522484.5	3646	6	46	54	1	-5	multi-exon	FALSE	canonical	1	18543	junction_4	104893.4398101235	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	374	1675	30.0	-21	True	TTTAAA	-18
PB.5037.1	chr17	+	1737	11	full-splice_match	RUNDC3A	ENST00000225441.11	1821	11	69	15	69	-15	multi-exon	TRUE	canonical	1	123165	junction_2	101727.79609334902	NA	4	1	TRUE	NA	NA	NA	A	coding	396	1191	196	1386	25.0	-7790	False	NA	NA
PB.1103.6	chr1	+	1895	11	full-splice_match	TRAF5	ENST00000261464.9	3972	11	-14	2091	-10	60	multi-exon	FALSE	canonical	1	61758	junction_1	53300.37398039529	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	69	1742	15.0	-10	True	TTTAAA	-14
PB.1103.7	chr1	+	4052	12	novel_not_in_catalog	TRAF5	novel	4958	6	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	2282	junction_8	73870.81820234765	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	59	904	30.0	0	True	AGTAAA	-18
PB.1103.4	chr1	+	5014	11	novel_not_in_catalog	TRAF5	novel	4958	6	NA	NA	-20	2	any annotated donor/acceptor	FALSE	canonical	1	17983	junction_8	65169.648922178494	NA	3	NA	TRUE	NA	NA	NA	C	coding	270	813	79	891	30.0	-20	True	AGTAAA	-18
PB.1103.5	chr1	+	7133	10	novel_in_catalog	TRAF5	novel	4958	6	NA	NA	-19	-684	intron_retention	FALSE	canonical	1	61758	junction_1	53322.192743619	NA	15	1	TRUE	NA	NA	NA	C	coding	270	813	78	890	25.0	-19	True	TATAAA	-18
PB.6331.2	chr2	-	3141	1	novel_in_catalog	LINC01376	novel	2080	8	NA	NA	51	-300010	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	6	True	NA	NA
PB.6331.3	chr2	-	2912	1	novel_in_catalog	LINC01376	novel	2080	8	NA	NA	44	-300246	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.1650.14	chr10	+	3381	11	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	16917	junction_9	409588.51329962857	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	167	1465	45.0	-13	True	AATAAA	-18
PB.1650.17	chr10	+	7732	1	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	2	-5687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	110	333	3	335	90.0	-7	True	NA	NA
PB.8963.11	chr4	-	3932	1	novel_in_catalog	CCNA2	novel	2797	8	NA	NA	43	-3513	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-7	True	NA	NA
PB.8963.10	chr4	-	1509	7	incomplete-splice_match	CCNA2	ENST00000274026.9	2797	8	18	1627	18	-1626	3prime_fragment	FALSE	canonical	1	562055	junction_5	170533.97486001303	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1221	287	1507	70.0	-32	True	NA	NA
PB.392.12	chr1	-	3991	10	novel_in_catalog	EFCAB14	novel	5767	11	NA	NA	-56	1464	combination_of_known_junctions	FALSE	canonical	1	112291	junction_8	170322.10009998447	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	1034	2329	30.0	-17	True	ATTAAA	-13
PB.7982.4	chr3	-	2335	11	full-splice_match	NGLY1	ENST00000396649.7	2024	11	15	-326	-9	0	multi-exon	FALSE	canonical	1	66949	junction_1	90901.59589825693	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	34	1710	20.0	19	False	AATAAA	-18
PB.392.10	chr1	-	4454	12	novel_not_in_catalog	EFCAB14	novel	5767	11	NA	NA	-40	-1416	any annotated donor/acceptor	FALSE	canonical	1	11410	junction_3	212382.65217754236	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	1018	2568	40.0	-1	True	AATAAA	-13
PB.10770.3	chr7	-	3427	16	full-splice_match	PUS7	ENST00000356362.6	3480	16	11	42	11	-42	multi-exon	FALSE	canonical	1	22437	junction_15	61595.26394910569	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	205	2190	25.0	-12	True	AATAAA	-17
PB.10770.2	chr7	-	3258	15	novel_not_in_catalog	PUS7	novel	2436	17	NA	NA	28	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	94979.3752908375	NA	4	1	TRUE	NA	NA	NA	C	coding	231	696	212	907	35.0	5	True	NA	NA
PB.10770.1	chr7	-	3440	16	full-splice_match	PUS7	ENST00000469408.5	2356	16	21	-1105	21	-43	multi-exon	FALSE	canonical	1	71480	junction_15	52874.4408379785	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	219	2204	25.0	-2	True	AATAAA	-16
PB.392.11	chr1	-	4212	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	-79	1634	-79	1470	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	3	NA	TRUE	NA	NA	NA	C	coding	495	1488	1057	2544	25.0	-40	True	ATTAAA	-19
PB.10770.7	chr7	-	3419	16	novel_not_in_catalog	PUS7	novel	2436	17	NA	NA	1	-43	any annotated donor/acceptor	FALSE	canonical	1	4874	junction_14	72130.48449377467	NA	3	NA	TRUE	NA	NA	NA	C	coding	392	1179	1005	2183	25.0	9811	False	AATAAA	-16
PB.10770.6	chr7	-	3298	15	novel_in_catalog	PUS7	novel	2436	17	NA	NA	19	-42	no_combination_of_known_junctions	FALSE	canonical	1	3112	junction_11	73581.87933613652	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	943	2061	25.0	-4	True	AATAAA	-17
PB.10770.5	chr7	-	3376	16	novel_not_in_catalog	PUS7	novel	2436	17	NA	NA	16	-4	any annotated donor/acceptor	FALSE	canonical	1	1116	junction_5	70601.14610231196	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	224	2101	55.0	-7	True	TTTAAA	-45
PB.10770.4	chr7	-	3413	16	novel_in_catalog	PUS7	novel	2436	17	NA	NA	24	6	combination_of_known_junctions	FALSE	canonical	1	16655	junction_5	67835.17754328421	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	216	1562	35.0	1	True	NA	NA
PB.392.16	chr1	-	2530	10	novel_in_catalog	EFCAB14	novel	5767	11	NA	NA	-77	9	combination_of_known_junctions	FALSE	canonical	1	112291	junction_8	170322.10009998447	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	1055	2350	35.0	-38	True	TATAAA	-31
PB.10770.9	chr7	-	3343	15	novel_not_in_catalog	PUS7	novel	2436	17	NA	NA	21	-43	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	75253.74877817294	NA	12	3	TRUE	NA	NA	NA	C	coding	528	1587	219	1805	25.0	-2	True	AATAAA	-16
PB.10770.8	chr7	-	3377	16	novel_in_catalog	PUS7	novel	2436	17	NA	NA	-4	-43	combination_of_known_junctions	FALSE	canonical	1	16655	junction_5	74524.22027877916	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	229	1575	25.0	-1	True	AATAAA	-16
PB.392.17	chr1	-	2683	11	full-splice_match	EFCAB14	ENST00000371933.7	5767	11	-56	3140	-56	-9	multi-exon	FALSE	canonical	1	112291	junction_9	155958.43986524103	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	1034	2521	50.0	-17	True	TATAAA	-13
PB.10556.15	chr7	+	1949	14	full-splice_match	CCT6A	ENST00000275603.8	2719	14	179	591	124	99	multi-exon	FALSE	canonical	1	878959	junction_13	787601.1410280501	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	41	1636	40.0	-3	True	NA	NA
PB.10556.14	chr7	+	2556	14	full-splice_match	CCT6A	ENST00000275603.8	2719	14	164	-1	109	1	multi-exon	FALSE	canonical	1	878959	junction_13	787601.1410280501	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	56	1651	15.0	-9902	False	AATAAA	-19
PB.10556.11	chr7	+	1944	14	novel_not_in_catalog	CCT6A	novel	2719	14	NA	NA	93	96	any annotated donor/acceptor	FALSE	canonical	1	446	junction_11	945874.7226110572	NA	4	NA	TRUE	NA	NA	NA	C	coding	520	1563	72	1634	45.0	13	True	NA	NA
PB.10556.10	chr7	+	1784	14	full-splice_match	CCT6A	ENST00000275603.8	2719	14	144	791	89	20	multi-exon	FALSE	canonical	1	878959	junction_13	787601.1410280501	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	76	1671	55.0	9	True	AAGAAA	-13
PB.10556.13	chr7	+	2592	13	novel_in_catalog	CCT6A	novel	2719	14	NA	NA	106	96	intron_retention	FALSE	canonical	1	878959	junction_12	767144.6896837649	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	59	1144	45.0	-9905	False	NA	NA
PB.7200.1	chr20	+	2098	13	full-splice_match	KIZ	ENST00000619189.4	2130	13	28	4	22	0	multi-exon	FALSE	canonical	1	106900	junction_1	48054.821722752815	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	35	2056	35.0	0	True	AATAAA	-16
PB.5708.4	chr19	+	2861	24	novel_not_in_catalog	SLC44A2	novel	586	7	NA	NA	-1	-218	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	460231.0895977547	NA	8	2	TRUE	NA	NA	NA	C	coding	627	1884	451	2334	15.0	-1	True	ATTAAA	-17
PB.8788.7	chr4	+	3785	14	incomplete-splice_match	CEP135	ENST00000506202.1	5129	19	16120	9	16120	-9	5prime_fragment	FALSE	canonical	1	62047	junction_9	22698.82704057087	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	314	2038	70.0	0	True	AATAAA	-8
PB.7200.2	chr20	+	1913	11	full-splice_match	KIZ	ENST00000616848.4	1875	11	-47	9	-2	-9	multi-exon	FALSE	canonical	1	4229	junction_2	73078.01093085388	NA	3	NA	TRUE	NA	NA	NA	C	coding	504	1515	366	1880	50.0	0	True	AATAAA	-7
PB.7200.3	chr20	+	2100	13	novel_in_catalog	KIZ	novel	1971	11	NA	NA	3	-9	combination_of_known_junctions	FALSE	canonical	1	16	junction_7	67387.92801426348	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	100	2067	50.0	-5	True	AATAAA	-7
PB.11625.91	chr9	-	1500	14	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	4	120	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	829077.9307756984	NA	2	1	TRUE	NA	NA	NA	B	coding	201	603	897	1499	35.0	-14	True	NA	NA
PB.1199.16	chr1	-	3892	3	incomplete-splice_match	EGLN1	ENST00000366641.3	7097	5	2749	4474	-1952	-2085	3prime_fragment	FALSE	canonical	1	464176	junction_1	90569.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	408	1559	15.0	-9	True	NA	NA
PB.7200.4	chr20	+	3127	6	incomplete-splice_match	KIZ	ENST00000619189.4	2130	13	-14	81764	1	19203	3prime_fragment	FALSE	canonical	1	106900	junction_1	53823.11156742984	NA	3	NA	TRUE	NA	NA	NA	C	coding	451	1356	77	1432	15.0	-10	True	AATAAA	-23
PB.6678.10	chr2	+	1924	5	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	656	38769	-6	402	intron_retention	FALSE	canonical	1	157152	junction_1	14745.43097666189	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	963	961	1923	65.0	-5	True	NA	NA
PB.3120.1	chr13	-	2466	1	novel_in_catalog	FOXO1	novel	1773	4	NA	NA	12704	-40293	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	4926	False	NA	NA
PB.11068.22	chr8	-	5687	1	genic	DUSP4	novel	NA	NA	NA	NA	-41	-8484	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	14	NA	NA	NA	NA	NA	C	coding	221	666	441	1106	60.0	13	True	NA	NA
PB.7903.7	chr3	-	3802	1	novel_in_catalog	CRBN	novel	2223	12	NA	NA	0	-2013	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-11	True	NA	NA
PB.11473.10	chr9	-	1317	3	full-splice_match	PLIN2	ENST00000472715.1	801	3	-2	-514	-2	387	multi-exon	FALSE	canonical	1	718415	junction_1	158411.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	78	237	97	333	35.0	-1	True	NA	NA
PB.3226.10	chr13	+	3118	5	novel_not_in_catalog	DNAJC3	novel	5591	12	NA	NA	-7	-46590	any annotated donor/acceptor	FALSE	canonical	1	6105	junction_4	138524.47833573495	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	106	810	20.0	-4	True	CATAAA	-42
PB.11086.1	chr8	+	1579	8	full-splice_match	PLPBP	ENST00000328195.7	2558	8	12	967	5	720	multi-exon	FALSE	canonical	1	315294	junction_1	93889.57914008369	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	74	883	70.0	11	True	NA	NA
PB.8389.7	chr3	+	3055	24	full-splice_match	COPG1	ENST00000314797.10	3078	24	25	-2	-1	2	multi-exon	FALSE	canonical	1	775161	junction_1	274874.31229984696	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	80	2704	20.0	25	True	AATAAA	-22
PB.696.1	chr1	+	1971	14	full-splice_match	GPR89B	ENST00000488165.5	1954	14	-20	3	-20	-3	multi-exon	FALSE	canonical	1	817	junction_4	18452.442285716334	NA	11	2	TRUE	NA	NA	NA	C	coding	335	1008	545	1552	20.0	-78	False	ATTAAA	-12
PB.7344.9	chr20	-	2320	1	novel_in_catalog	ZNFX1	novel	5235	15	NA	NA	-4616	-1149	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	691	2076	27	2102	60.0	NA	False	NA	NA
PB.7157.2	chr20	+	2196	7	full-splice_match	SMOX	ENST00000305958.8	2233	7	13	24	13	-23	multi-exon	FALSE	canonical	1	202769	junction_1	47625.551287856215	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	213	1880	5.0	-6482	False	AATAAA	-21
PB.7198.1	chr20	-	4163	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	10	-164	10	158	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	3	NA	TRUE	NA	NA	NA	C	coding	687	2064	115	2178	80.0	9	True	NA	NA
PB.7198.2	chr20	-	4013	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	9	-13	9	7	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	116	2179	0.0	8	True	AGTAAA	-31
PB.7198.3	chr20	-	3529	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	30	450	30	-450	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	95	2158	45.0	29	True	AATAAA	-23
PB.7198.4	chr20	-	3048	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	-9	970	-9	662	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	134	2197	35.0	-10	True	NA	NA
PB.7198.5	chr20	-	2731	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	-1	1279	-1	353	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	126	2189	30.0	-2	True	NA	NA
PB.7198.6	chr20	-	2526	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	-9	1492	-9	140	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	134	2197	30.0	-10	True	CATAAA	-21
PB.7198.7	chr20	-	2290	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	18	1701	18	67	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	107	2170	25.0	17	True	AAGAAA	-23
PB.7198.8	chr20	-	2218	14	full-splice_match	CRNKL1	ENST00000536226.1	4009	14	21	1770	21	-2	multi-exon	FALSE	canonical	1	248662	junction_13	66458.37922566105	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	104	2167	25.0	20	True	TATAAA	-13
PB.2417.10	chr12	-	2587	10	novel_not_in_catalog	IFFO1	novel	3101	12	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	118868.61015807993	NA	3	1	TRUE	NA	NA	NA	B	coding	509	1530	116	1645	15.0	-23	True	NA	NA
PB.2788.4	chr12	+	2828	7	full-splice_match	C12orf29	ENST00000356891.3	2919	7	90	1	0	1	multi-exon	FALSE	canonical	1	169615	junction_2	50198.20613550072	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	114	1091	20.0	0	True	AATAAA	-17
PB.2788.2	chr12	+	2745	7	full-splice_match	C12orf29	ENST00000356891.3	2919	7	70	104	11	-102	multi-exon	FALSE	canonical	1	169615	junction_2	50198.20613550072	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	134	1111	75.0	-1	True	NA	NA
PB.2788.3	chr12	+	2716	6	full-splice_match	C12orf29	ENST00000550333.5	2740	6	25	-1	-6	1	multi-exon	FALSE	canonical	1	71829	junction_1	79996.95384050571	NA	0	NA	TRUE	NA	NA	NA	C	coding	46	141	839	979	20.0	-6	True	AATAAA	-17
PB.2788.1	chr12	+	2643	6	full-splice_match	C12orf29	ENST00000550333.5	2740	6	-5	102	-5	-102	multi-exon	FALSE	canonical	1	71829	junction_1	79996.95384050571	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-17	True	NA	NA
PB.1199.14	chr1	-	1848	6	novel_not_in_catalog	EGLN1	novel	7097	5	NA	NA	-1953	230	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	226220.54511772355	NA	10	1	TRUE	NA	NA	NA	C	coding	426	1281	67	1347	30.0	-10	True	ATTAAA	-22
PB.3853.1	chr15	-	5571	27	full-splice_match	CEP152	ENST00000380950.6	5635	27	62	2	0	-2	multi-exon	FALSE	canonical	1	34757	junction_1	18864.525472674144	NA	0	NA	TRUE	NA	NA	NA	C	coding	1710	5133	127	5259	30.0	-11	True	AATAAA	-19
PB.10898.14	chr7	-	4043	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	-20	724	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	112310.24465953396	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	117	2882	75.0	0	True	NA	NA
PB.4548.14	chr16	-	3165	13	incomplete-splice_match	GLG1	ENST00000627032.2	2147	14	27	866	-3	716	3prime_fragment	FALSE	canonical	1	452468	junction_12	122253.3459603458	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	51	2141	90.0	-4	True	NA	NA
PB.4548.15	chr16	-	2651	13	incomplete-splice_match	GLG1	ENST00000627032.2	2147	14	27	1380	-3	202	3prime_fragment	FALSE	canonical	1	452468	junction_12	122253.3459603458	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	51	2141	85.0	-4	True	NA	NA
PB.4548.16	chr16	-	3303	1	novel_in_catalog	GLG1	novel	2147	14	NA	NA	-2	-100078	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	245	738	23	760	60.0	-3	True	AATAAA	-26
PB.6514.1	chr2	+	2701	6	full-splice_match	ETAA1	ENST00000644028.1	2946	6	-9	254	-4	-254	multi-exon	FALSE	canonical	1	14077	junction_4	49072.215378562236	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	135	743	25.0	-18	True	AATAAA	-20
PB.4548.10	chr16	-	3148	23	incomplete-splice_match	GLG1	ENST00000422840.6	4748	26	-25	7744	-5	1786	3prime_fragment	FALSE	canonical	1	452468	junction_22	163469.2769270409	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3096	53	3148	60.0	-6	True	NA	NA
PB.4548.11	chr16	-	3053	19	incomplete-splice_match	GLG1	ENST00000422840.6	4748	26	-42	13373	8	2427	3prime_fragment	FALSE	canonical	1	452468	junction_18	143635.64036666948	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	70	2817	45.0	-23	False	AATAAA	-26
PB.4548.12	chr16	-	2548	18	incomplete-splice_match	GLG1	ENST00000422840.6	4748	26	-19	15797	-1	3	3prime_fragment	FALSE	canonical	1	452468	junction_17	144369.20052948446	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2502	47	2548	10.0	0	True	NA	NA
PB.4548.13	chr16	-	2343	16	incomplete-splice_match	GLG1	ENST00000422840.6	4748	26	-40	18041	10	-1746	3prime_fragment	FALSE	canonical	1	452468	junction_15	128284.70297993011	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2274	68	2341	65.0	-21	False	TTTAAA	-36
PB.6910.31	chr2	-	4022	26	novel_in_catalog	STAT1	novel	663	3	NA	NA	10	-277	combination_of_known_junctions	FALSE	canonical	1	32434	junction_23	465666.9244809143	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	374	2632	50.0	1	True	ATTAAA	-19
PB.1308.7	chr10	+	3045	6	full-splice_match	SUV39H2	ENST00000354919.10	1233	6	-21	-1791	5	-12	multi-exon	FALSE	canonical	1	28676	junction_1	79704.76057651763	NA	3	1	TRUE	NA	NA	NA	C	coding	410	1233	22	1254	60.0	2	True	NA	NA
PB.6910.32	chr2	-	3758	24	novel_in_catalog	STAT1	novel	663	3	NA	NA	10	-304	combination_of_known_junctions	FALSE	canonical	1	21618	junction_23	381966.3952235631	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	143	2395	55.0	1	True	GATAAA	-21
PB.7804.27	chr22	+	3072	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5603	19637	intron_retention	FALSE	canonical	1	341256	junction_7	96830.24291395547	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	167	2242	30.0	28	True	AATAAA	-13
PB.6830.3	chr2	+	2461	13	full-splice_match	DCAF17	ENST00000468592.5	2429	13	-24	-8	-24	8	multi-exon	FALSE	canonical	1	29844	junction_1	26303.057621559048	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	849	1409	20.0	-135	False	AATAAA	-21
PB.1199.13	chr1	-	2226	5	full-splice_match	EGLN1	ENST00000366641.3	7097	5	2713	2158	-1988	231	multi-exon	FALSE	canonical	1	192132	junction_2	188153.631098366	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	444	1724	30.0	-1	True	ATTAAA	-23
PB.7804.26	chr22	+	3163	20	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5601	19637	intron_retention	FALSE	canonical	1	608	junction_3	188926.44630798808	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	169	2064	30.0	26	True	AATAAA	-13
PB.7804.21	chr22	+	2774	19	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5590	19637	intron_retention	FALSE	canonical	1	12110	junction_5	179968.12685738428	NA	15	NA	TRUE	NA	NA	NA	C	coding	548	1647	298	1944	30.0	15	True	AATAAA	-13
PB.4264.1	chr16	-	2023	1	antisense	novelGene_NOMO1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	coding	102	309	1132	1440	100.0	NA	False	NA	NA
PB.3504.20	chr14	-	2328	4	full-splice_match	MAX	ENST00000555667.5	574	4	2	-1756	2	-1	multi-exon	FALSE	canonical	1	80994	junction_1	427479.42656642036	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	1	True	CATAAA	-17
PB.7681.4	chr22	-	2473	4	intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9056	junction_1	35240.79054164364	NA	1	NA	FALSE	NA	NA	NA	A	coding	99	300	685	984	0.0	-1	True	NA	NA
PB.251.10	chr1	+	5110	10	novel_not_in_catalog	TXLNA	novel	4854	11	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	8204	junction_2	185614.37142382519	NA	3	NA	TRUE	NA	NA	NA	C	coding	579	1740	282	2021	10.0	-41	True	AATAAA	-15
PB.11174.1	chr8	+	2388	2	incomplete-splice_match	AC079089.1	ENST00000533300.1	431	3	-52	4834	-10	-4834	3prime_fragment	FALSE	canonical	1	5125	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-21	True	NA	NA
PB.6114.11	chr19	-	3980	13	novel_in_catalog	CARD8	novel	1363	4	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	1	35832	junction_7	66548.73437731346	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	628	1926	45.0	17	True	AATAAA	-18
PB.7541.3	chr21	-	2583	18	novel_in_catalog	CBS	novel	2656	14	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	21222	junction_1	272146.1833702551	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	199	1896	20.0	-11	True	NA	NA
PB.6114.10	chr19	-	4387	13	novel_not_in_catalog	CARD8	novel	1363	4	NA	NA	24	-12	any annotated donor/acceptor	FALSE	canonical	1	5366	junction_11	94855.14045239222	NA	5	1	TRUE	NA	NA	NA	C	coding	536	1611	723	2333	45.0	-16	True	AATAAA	-18
PB.6937.1	chr2	+	3006	12	full-splice_match	BZW1	ENST00000409600.5	6875	12	375	3494	-2	606	multi-exon	FALSE	canonical	1	396	junction_10	886544.858005029	NA	9	NA	TRUE	NA	NA	NA	C	coding	419	1260	81	1340	15.0	11	True	AATAAA	-25
PB.7541.1	chr21	-	3669	16	novel_in_catalog	CBS	novel	2656	14	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	385507	junction_13	188430.01768585955	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	190	1338	20.0	-2	True	NA	NA
PB.5886.1	chr19	-	2076	5	novel_not_in_catalog	ZNF724	novel	2764	4	NA	NA	-6	4735	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	18209.177375364874	NA	1	1	TRUE	NA	NA	NA	A	coding	640	1920	155	2074	85.0	-9	True	NA	NA
PB.9276.1	chr5	+	1857	3	full-splice_match	SERF1B	ENST00000380750.7	1889	3	30	2	30	-2	multi-exon	FALSE	canonical	1	1128	junction_2	121.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	154	486	15.0	NA	False	NA	NA
PB.3504.21	chr14	-	1508	6	full-splice_match	MAX	ENST00000394606.6	2097	6	17	572	2	-155	multi-exon	FALSE	canonical	1	52891	junction_1	379521.0674840595	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	164	475	15.0	14	True	NA	NA
PB.9276.2	chr5	+	1867	3	full-splice_match	SERF1B	ENST00000515588.1	792	3	29	-1104	0	-1	multi-exon	TRUE	canonical	1	332	junction_1	398.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.8865.3	chr4	+	7927	46	novel_in_catalog	PTPN13	novel	8487	47	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	23512	junction_6	54802.11270413343	NA	14	1	TRUE	NA	NA	NA	C	coding	2279	6840	481	7320	40.0	-4	True	AATAAA	-28
PB.3244.20	chr13	+	3293	19	novel_in_catalog	TPP2	novel	3931	29	NA	NA	6883	710	no_combination_of_known_junctions	FALSE	canonical	1	73519	junction_16	111850.44381524227	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	10	2052	25.0	NA	False	AATAAA	-21
PB.987.4	chr1	+	1761	4	full-splice_match	TSEN15	ENST00000423085.7	1844	4	76	7	-3	-1	multi-exon	FALSE	canonical	1	91047	junction_3	162039.2959274591	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	30	419	40.0	-6	True	AATAAA	-12
PB.556.1	chr1	+	3260	3	incomplete-splice_match	RWDD3	ENST00000495272.5	1294	5	-25	0	-15	0	intron_retention	FALSE	canonical	1	23829	junction_1	3378.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	180	543	214	756	40.0	-29	True	ATTAAA	-10
PB.8597.4	chr3	-	2749	4	full-splice_match	CLDN1	ENST00000295522.3	3481	4	29	703	29	-703	multi-exon	FALSE	canonical	1	285501	junction_3	60040.838109480865	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	241	876	70.0	-6	True	NA	NA
PB.987.5	chr1	+	2021	6	full-splice_match	TSEN15	ENST00000462677.2	1628	6	-31	-362	-1	2	multi-exon	FALSE	canonical	1	8926	junction_4	200207.55335501206	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	28	441	35.0	-4	True	AATAAA	-15
PB.11650.13	chr9	-	2864	4	full-splice_match	ZNF484	ENST00000332591.6	2836	4	-29	1	-13	-1	multi-exon	FALSE	canonical	1	13556	junction_3	22626.040224091845	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	256	2706	10.0	-14	True	AGTAAA	-15
PB.1199.11	chr1	-	3498	5	full-splice_match	EGLN1	ENST00000366641.3	7097	5	2726	873	-1975	-873	multi-exon	FALSE	canonical	1	192132	junction_2	188153.631098366	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	431	1711	60.0	8021	False	ATTAAA	-23
PB.4540.8	chr16	+	3922	9	full-splice_match	IST1	ENST00000378798.9	2255	9	-40	-1627	3	-4	multi-exon	FALSE	canonical	1	34560	junction_7	161351.92062959578	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	93	1100	30.0	-24	True	AATAAA	-21
PB.4540.9	chr16	+	4014	10	full-splice_match	IST1	ENST00000378799.10	4843	10	265	564	4	-4	multi-exon	FALSE	canonical	1	68841	junction_3	182482.49936573487	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	92	1192	30.0	-23	True	AATAAA	-21
PB.10898.17	chr7	-	3949	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	13	597	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	111863.6840754742	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	150	2915	75.0	2499	False	NA	NA
PB.4540.2	chr16	+	1471	1	novel_in_catalog	IST1	novel	503	5	NA	NA	3	-19526	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-40	True	NA	NA
PB.4540.3	chr16	+	2493	11	novel_in_catalog	IST1	novel	503	5	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	1	1514	junction_2	192981.91178991363	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	201	1301	5.0	-38	True	AATAAA	-16
PB.8865.4	chr4	+	2411	13	incomplete-splice_match	PTPN13	ENST00000427191.6	8487	47	0	80782	0	-28559	3prime_fragment	FALSE	canonical	1	52878	junction_1	29461.48673362489	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1929	481	2409	65.0	-4	True	NA	NA
PB.4540.1	chr16	+	2525	10	full-splice_match	IST1	ENST00000535424.5	4082	10	-79	1636	-79	1	multi-exon	FALSE	canonical	1	11520	junction_1	187721.68216804366	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	196	1335	5.0	-5712	False	AATAAA	-14
PB.4540.6	chr16	+	3778	9	novel_in_catalog	IST1	novel	503	5	NA	NA	0	3	intron_retention	FALSE	canonical	1	68841	junction_3	182666.35168371187	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	98	961	5.0	-29	True	AATAAA	-16
PB.4540.7	chr16	+	3078	10	full-splice_match	IST1	ENST00000378799.10	4843	10	259	1506	0	683	multi-exon	FALSE	canonical	1	68841	junction_3	182482.49936573487	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	98	1198	70.0	-29	True	NA	NA
PB.4540.4	chr16	+	4386	8	novel_in_catalog	IST1	novel	503	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	68841	junction_3	150962.80546585785	NA	2	NA	TRUE	NA	NA	NA	C	coding	263	792	98	889	5.0	-29	True	AATAAA	-17
PB.4540.5	chr16	+	2378	10	full-splice_match	IST1	ENST00000378799.10	4843	10	271	2194	10	3	multi-exon	FALSE	canonical	1	68841	junction_3	182482.49936573487	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	86	1186	5.0	-17	True	AATAAA	-16
PB.6210.4	chr19	+	3472	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-49	495	any annotated donor/acceptor	FALSE	canonical	1	6209	junction_7	45690.619636371266	NA	3	NA	TRUE	NA	NA	NA	B	coding	351	1056	407	1462	20.0	-27	False	NA	NA
PB.6210.5	chr19	+	4496	14	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-31	-1	intron_retention	FALSE	canonical	1	10540	junction_10	45755.85012863473	NA	1	NA	TRUE	NA	NA	NA	B	coding	455	1368	389	1756	90.0	-9	True	NA	NA
PB.6210.6	chr19	+	3614	15	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-29	0	intron_retention	FALSE	canonical	1	10540	junction_10	43355.38364923609	NA	1	NA	TRUE	NA	NA	NA	B	coding	456	1371	387	1757	95.0	-7	True	NA	NA
PB.6210.7	chr19	+	3485	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-29	493	combination_of_known_junctions	FALSE	canonical	1	10540	junction_11	41618.06168907384	NA	0	NA	TRUE	NA	NA	NA	B	coding	651	1956	387	2342	25.0	-7	True	NA	NA
PB.6210.1	chr19	+	3033	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-866	1	any annotated donor/acceptor	FALSE	canonical	1	3944	junction_1	45904.52032962912	NA	0	NA	TRUE	NA	NA	NA	B	coding	650	1953	430	2382	95.0	-844	False	NA	NA
PB.6210.2	chr19	+	3487	16	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-822	493	any annotated donor/acceptor	FALSE	canonical	1	3944	junction_1	45233.64643694141	NA	0	NA	TRUE	NA	NA	NA	B	coding	652	1959	386	2344	25.0	12	True	NA	NA
PB.6210.3	chr19	+	4382	14	novel_not_in_catalog	LILRB1	novel	2960	16	NA	NA	-334	493	intron_retention	FALSE	canonical	1	6209	junction_7	45253.772374055625	NA	1	NA	TRUE	NA	NA	NA	B	coding	351	1056	692	1747	25.0	-312	False	NA	NA
PB.696.4	chr1	+	2020	15	novel_not_in_catalog	GPR89B	novel	1934	14	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	17869.56967736161	NA	2	1	TRUE	NA	NA	NA	C	coding	252	759	146	904	20.0	-59	False	ATTAAA	-14
PB.987.3	chr1	+	1800	5	full-splice_match	TSEN15	ENST00000533373.6	1834	5	27	7	4	-1	multi-exon	FALSE	canonical	1	25326	junction_4	184447.96412318436	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	31	435	40.0	-7	True	AATAAA	-12
PB.6210.8	chr19	+	3434	15	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-29	493	no_combination_of_known_junctions	FALSE	canonical	1	2953	junction_8	46567.44208880146	NA	2	NA	TRUE	NA	NA	NA	B	coding	634	1905	387	2291	25.0	-7	True	NA	NA
PB.6210.9	chr19	+	2915	16	novel_in_catalog	LILRB1	novel	2960	16	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	7098	junction_8	45291.22979974526	NA	1	NA	TRUE	NA	NA	NA	B	coding	414	1245	387	1631	95.0	-7	True	NA	NA
PB.3460.10	chr14	+	1584	2	full-splice_match	AP5M1	ENST00000554931.1	1691	2	89	18	-13	-18	multi-exon	FALSE	canonical	1	310853	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	303	1157	65.0	-24	True	NA	NA
PB.3460.11	chr14	+	3560	3	incomplete-splice_match	AP5M1	ENST00000261558.7	11737	8	117	15997	0	-274	intron_retention	FALSE	canonical	1	262388	junction_2	24232.5	NA	7	1	TRUE	NA	NA	NA	C	coding	321	966	290	1255	30.0	-11	True	AATACA	-11
PB.771.14	chr1	-	1899	3	full-splice_match	SLC39A1	ENST00000537590.5	2022	3	111	12	-38	0	multi-exon	FALSE	canonical	1	5083	junction_1	294896.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	559	912	25.0	6	True	AATAAA	-15
PB.10898.10	chr7	-	4287	10	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	1	724	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	106620.19503665486	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	361	3126	75.0	2465	False	NA	NA
PB.11925.1	chr9	+	2073	11	novel_not_in_catalog	NELFB	novel	2698	13	NA	NA	49	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	268480.62857981026	NA	1	1	TRUE	NA	NA	NA	C	coding	449	1350	114	1463	30.0	5	True	AATAAA	-12
PB.8865.5	chr4	+	8543	48	full-splice_match	PTPN13	ENST00000411767.6	8119	48	-416	-8	-1	0	multi-exon	FALSE	canonical	1	52878	junction_1	53918.426235986386	NA	0	NA	TRUE	NA	NA	NA	C	coding	2485	7458	480	7937	45.0	-3	True	AATAAA	-27
PB.6759.7	chr2	-	2620	2	full-splice_match	DARS	ENST00000474184.1	431	2	-2189	0	48	0	multi-exon	FALSE	canonical	1	1128774	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	3	509	85.0	-11	True	NA	NA
PB.307.2	chr1	-	2067	5	full-splice_match	MYCBP	ENST00000397572.4	2818	5	744	7	7	-7	multi-exon	FALSE	canonical	1	307059	junction_4	35555.35066185538	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	57	368	40.0	-14	True	AATAAA	-23
PB.307.3	chr1	-	1558	5	full-splice_match	MYCBP	ENST00000397572.4	2818	5	730	530	-7	-530	multi-exon	FALSE	canonical	1	307059	junction_4	35555.35066185538	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	2	382	5.0	-28	True	NA	NA
PB.307.1	chr1	-	2549	5	full-splice_match	MYCBP	ENST00000397572.4	2818	5	737	-468	0	468	multi-exon	FALSE	canonical	1	307059	junction_4	35555.35066185538	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	64	375	35.0	-21	True	NA	NA
PB.6988.4	chr2	-	2370	9	novel_in_catalog	BARD1	novel	5499	11	NA	NA	-1	-15	combination_of_known_junctions	FALSE	canonical	1	2503	junction_8	41370.76048370395	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	346	2247	80.0	-6	True	NA	NA
PB.6988.5	chr2	-	2352	9	novel_in_catalog	BARD1	novel	5499	11	NA	NA	-3	-15	no_combination_of_known_junctions	FALSE	canonical	1	447	junction_2	44391.94917560362	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	122	1804	80.0	-8	True	NA	NA
PB.10551.8	chr7	-	2777	4	full-splice_match	VOPP1	ENST00000453256.5	649	4	11	-2139	11	-1	multi-exon	FALSE	canonical	1	12443	junction_3	26630.139946225507	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	223	537	10.0	9721	False	AATAAA	-13
PB.841.21	chr1	+	3029	13	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	29	junction_9	405470.386485869	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	275	1825	35.0	-19	True	AATAAA	-21
PB.841.26	chr1	+	4840	2	incomplete-splice_match	IFI16	ENST00000447473.6	951	5	921	-2562	-2	878	intron_retention	FALSE	canonical	1	882902	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	3932	4324	85.0	-11	True	NA	NA
PB.6988.1	chr2	-	2670	12	novel_not_in_catalog	BARD1	novel	5499	11	NA	NA	0	-15	any annotated donor/acceptor	FALSE	canonical	1	1751	junction_10	48516.269231555314	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	115	2547	80.0	-1	True	NA	NA
PB.6988.2	chr2	-	2569	11	full-splice_match	BARD1	ENST00000260947.8	5499	11	23	2907	2	-15	multi-exon	TRUE	canonical	1	88289	junction_10	18042.507797143942	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	113	2446	80.0	1	True	NA	NA
PB.6988.3	chr2	-	2484	10	full-splice_match	BARD1	ENST00000455743.5	2261	10	-72	-151	-34	-15	multi-exon	TRUE	canonical	1	9414	junction_8	37425.24274231214	NA	3	NA	TRUE	NA	NA	NA	C	coding	633	1902	460	2361	80.0	-20	False	NA	NA
PB.10551.2	chr7	-	2023	1	novel_in_catalog	VOPP1	novel	536	5	NA	NA	43441	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8990	False	AATAAA	-14
PB.10551.3	chr7	-	3243	7	novel_not_in_catalog	VOPP1	novel	536	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	416	junction_6	26772.35601013354	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	688	1002	10.0	-7	True	AATAAA	-14
PB.841.28	chr1	+	2110	2	incomplete-splice_match	IFI16	ENST00000447473.6	951	5	929	160	-3	-121	intron_retention	FALSE	canonical	1	882902	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	259	588	75.0	-3	True	NA	NA
PB.10551.1	chr7	-	4459	5	full-splice_match	VOPP1	ENST00000285279.9	2962	5	23	-1520	23	1520	multi-exon	FALSE	canonical	1	416	junction_4	31289.852744140553	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	179	697	60.0	-1	True	NA	NA
PB.10551.6	chr7	-	2855	5	full-splice_match	VOPP1	ENST00000285279.9	2962	5	24	83	24	-82	multi-exon	FALSE	canonical	1	416	junction_4	31289.852744140553	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	178	696	20.0	0	True	AGTAAA	-34
PB.10551.4	chr7	-	3183	5	novel_not_in_catalog	VOPP1	novel	536	5	NA	NA	24	0	any annotated donor/acceptor	FALSE	canonical	1	1197	junction_4	31071.540663241984	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	628	942	10.0	0	True	AATAAA	-14
PB.10551.5	chr7	-	3101	7	novel_not_in_catalog	VOPP1	novel	536	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	30868.39936821402	NA	5	NA	TRUE	NA	NA	NA	C	coding	104	315	546	860	10.0	-7	True	AATAAA	-14
PB.7052.27	chr2	-	6606	43	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	0	227	any annotated donor/acceptor	FALSE	canonical	1	74585	junction_39	290401.1596534188	NA	5	1	TRUE	NA	NA	NA	C	coding	2033	6102	165	6266	15.0	0	True	AATAAA	-17
PB.7052.24	chr2	-	6554	41	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-14	227	intron_retention	FALSE	canonical	1	238440	junction_40	260537.37926898204	NA	0	NA	TRUE	NA	NA	NA	C	coding	2025	6078	137	6214	15.0	28	True	AATAAA	-17
PB.10898.11	chr7	-	4120	9	full-splice_match	TCAF1	ENST00000355951.2	3343	9	-53	-724	19	724	multi-exon	FALSE	canonical	1	1087	junction_1	111815.80667413484	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	168	2927	75.0	-4	True	NA	NA
PB.7052.22	chr2	-	6667	42	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	-13	227	intron_retention	FALSE	canonical	1	75902	junction_25	289467.2143987987	NA	0	NA	TRUE	NA	NA	NA	C	coding	2063	6192	136	6327	15.0	29	True	AATAAA	-17
PB.7052.23	chr2	-	6703	43	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-67	227	combination_of_known_junctions	FALSE	canonical	1	74585	junction_39	276919.7568370482	NA	0	NA	TRUE	NA	NA	NA	C	coding	2038	6117	247	6363	15.0	1	True	AATAAA	-17
PB.7052.20	chr2	-	6653	42	full-splice_match	TRIP12	ENST00000389044.8	6405	42	-21	-227	-11	227	multi-exon	FALSE	canonical	1	107921	junction_25	273594.64699725294	NA	2	1	TRUE	NA	NA	NA	C	coding	2040	6123	191	6313	15.0	-26	True	AATAAA	-17
PB.7052.21	chr2	-	6726	42	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-45	227	intron_retention	FALSE	canonical	1	11890	junction_41	275099.2328065297	NA	1	NA	TRUE	NA	NA	NA	C	coding	2067	6204	183	6386	15.0	1776	False	AATAAA	-17
PB.10270.1	chr6	+	4215	8	novel_not_in_catalog	TAB2	novel	648	2	NA	NA	163	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	228602.21969640287	NA	2	NA	TRUE	NA	NA	NA	A	coding	693	2082	241	2322	15.0	7	True	ATTAAA	-21
PB.7052.28	chr2	-	6607	41	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	-22	227	intron_retention	FALSE	canonical	1	75902	junction_25	287949.5758380439	NA	1	NA	TRUE	NA	NA	NA	C	coding	2021	6066	202	6267	15.0	-37	True	AATAAA	-17
PB.7052.29	chr2	-	6621	41	novel_in_catalog	TRIP12	novel	9874	41	NA	NA	-42	227	intron_retention	TRUE	canonical	1	9283	junction_36	277151.8663319083	NA	2	NA	TRUE	NA	NA	NA	C	coding	2019	6060	222	6281	15.0	1128	False	AATAAA	-17
PB.9753.3	chr6	-	2826	4	novel_not_in_catalog	MCUR1	novel	5471	9	NA	NA	394	-187	intron_retention	FALSE	non_canonical	0	0	junction_1	172941.16114640454	NA	0	NA	TRUE	NA	NA	NA	C	coding	12	39	343	381	35.0	33	True	AATAAA	-21
PB.6362.3	chr2	+	2060	16	novel_not_in_catalog	HADHB	novel	557	8	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	6638	junction_3	560110.5128850753	NA	2	1	TRUE	NA	NA	NA	C	coding	437	1314	236	1549	25.0	-26	True	AATAAA	-16
PB.9349.40	chr5	-	4825	1	novel_in_catalog	MCTP1	novel	5396	23	NA	NA	0	-59454	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.1779.3	chr11	+	2252	7	novel_in_catalog	TRIM6-TRIM34	novel	3391	14	NA	NA	28285	-5	no_combination_of_known_junctions	FALSE	canonical	1	3257	junction_6	39834.02362721262	NA	0	NA	TRUE	NA	NA	NA	A	coding	479	1440	129	1568	40.0	5	True	NA	NA
PB.1779.2	chr11	+	2284	8	full-splice_match	TRIM34	ENST00000429814.2	2311	8	22	5	22	-5	multi-exon	FALSE	canonical	1	37240	junction_5	26585.8102915285	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	134	1600	40.0	0	True	NA	NA
PB.1779.1	chr11	+	2588	7	incomplete-splice_match	TRIM34	ENST00000429814.2	2311	8	18	5	18	-5	intron_retention	FALSE	canonical	1	37240	junction_5	28556.4653897424	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	138	1064	40.0	-4	True	NA	NA
PB.8191.11	chr3	+	3107	22	novel_not_in_catalog	APPL1	novel	2821	24	NA	NA	4	2504	any annotated donor/acceptor	FALSE	canonical	1	70	junction_1	98157.53634957269	NA	1	NA	TRUE	NA	NA	NA	C	coding	673	2022	248	2269	20.0	-25	True	AGTAAA	-26
PB.9353.3	chr5	-	2919	2	full-splice_match	GLRX	ENST00000512469.2	473	2	-15	-2431	0	0	multi-exon	FALSE	canonical	1	660556	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	65	385	25.0	-1	True	AATAAA	-16
PB.9353.2	chr5	-	801	3	full-splice_match	GLRX	ENST00000237858.10	1211	3	280	130	1	0	multi-exon	FALSE	canonical	1	660556	junction_2	321646.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	64	384	25.0	0	True	AATAAA	-16
PB.9353.1	chr5	-	931	3	full-splice_match	GLRX	ENST00000237858.10	1211	3	279	1	0	-1	multi-exon	FALSE	canonical	1	660556	junction_2	321646.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	65	385	35.0	-1	True	AATAAA	-17
PB.1779.4	chr11	+	2336	7	incomplete-splice_match	TRIM34	ENST00000429814.2	2311	8	7163	6	-135	-6	5prime_fragment	FALSE	canonical	1	37240	junction_4	28551.384897331263	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	187	1653	35.0	7099	False	NA	NA
PB.1342.37	chr10	-	2602	3	full-splice_match	YME1L1	ENST00000477432.1	3474	3	891	-19	-4	19	multi-exon	FALSE	canonical	1	39846	junction_1	519362.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	166	576	45.0	8	True	AATAAA	-33
PB.1342.36	chr10	-	2156	18	incomplete-splice_match	YME1L1	ENST00000376016.7	3856	19	8	4092	8	-2812	3prime_fragment	FALSE	canonical	1	731222	junction_15	207777.1088807197	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1980	175	2154	50.0	-1	True	NA	NA
PB.1342.35	chr10	-	2395	19	full-splice_match	YME1L1	ENST00000376016.7	3856	19	8	1453	8	-173	multi-exon	FALSE	canonical	1	731222	junction_16	240195.67682088792	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	175	2325	20.0	-1	True	AATACA	-25
PB.1342.34	chr10	-	2369	20	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	8	-5	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	339373.95363739866	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	175	2226	40.0	-1	True	AATAAA	-16
PB.1342.33	chr10	-	2389	18	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	2245	junction_16	342648.03603201226	NA	2	NA	TRUE	NA	NA	NA	C	coding	519	1560	592	2151	40.0	10	True	AATAAA	-16
PB.1342.32	chr10	-	2463	18	full-splice_match	YME1L1	ENST00000613434.4	4127	18	37	1627	9	-5	multi-exon	FALSE	canonical	1	46877	junction_15	340376.61223523214	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	174	2225	40.0	0	True	AATAAA	-16
PB.1342.31	chr10	-	2489	18	novel_in_catalog	YME1L1	novel	4127	18	NA	NA	8	-5	intron_retention	FALSE	canonical	1	12004	junction_2	352578.9136592178	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	175	2043	40.0	-1	True	AATAAA	-16
PB.1342.30	chr10	-	2641	20	novel_not_in_catalog	YME1L1	novel	4127	18	NA	NA	8	-5	intron_retention	FALSE	canonical	0	0	junction_15	465449.14622644946	NA	9	2	TRUE	NA	NA	NA	C	coding	519	1560	844	2403	40.0	-1	True	AATAAA	-16
PB.5290.2	chr17	-	3508	14	novel_not_in_catalog	CYTH1	novel	3315	14	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	1	2204	junction_13	273858.65865559014	NA	3	1	TRUE	NA	NA	NA	C	coding	338	1017	449	1465	0.0	-48	True	AATAAA	-21
PB.5290.5	chr17	-	7329	12	novel_in_catalog	CYTH1	novel	3315	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	84130	junction_3	204117.6638536162	NA	2	1	TRUE	NA	NA	NA	C	coding	372	1119	74	1192	5.0	-29	True	AATAAA	-20
PB.10017.8	chr6	-	4875	4	incomplete-splice_match	NFKBIE	ENST00000619360.5	2581	6	207	529	12	-2	intron_retention	FALSE	canonical	1	332332	junction_3	53289.66354014841	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	3674	4351	35.0	0	True	ACTAAA	-14
PB.5290.7	chr17	-	3555	13	novel_in_catalog	CYTH1	novel	3315	14	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	1	84130	junction_4	220694.2993931626	NA	12	1	TRUE	NA	NA	NA	C	coding	399	1200	315	1514	5.0	7810	False	AATAAA	-19
PB.5290.6	chr17	-	3469	14	novel_in_catalog	CYTH1	novel	3315	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	31922	junction_1	281688.4234029763	NA	2	1	TRUE	NA	NA	NA	C	coding	382	1149	172	1320	5.0	-1	True	AATAAA	-20
PB.10017.5	chr6	-	1733	5	novel_in_catalog	NFKBIE	novel	2581	6	NA	NA	42	19	intron_retention	FALSE	canonical	1	7568	junction_4	175286.41270414402	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	841	1188	15.0	-4	True	AAAAAG	-13
PB.5290.8	chr17	-	3376	14	novel_in_catalog	CYTH1	novel	3315	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	31922	junction_1	269880.2345159618	NA	3	1	TRUE	NA	NA	NA	C	coding	380	1143	85	1227	5.0	-40	True	AATAAA	-20
PB.10017.7	chr6	-	2026	5	novel_in_catalog	NFKBIE	novel	2581	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	171955	junction_4	109773.38780984214	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	248	1501	35.0	7529	False	ACTAAA	-15
PB.10017.6	chr6	-	3666	4	novel_in_catalog	NFKBIE	novel	2581	6	NA	NA	8	18	intron_retention	FALSE	canonical	1	171955	junction_3	124845.82861095342	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	2685	3122	15.0	-4	True	AAAAAG	-12
PB.10017.1	chr6	-	2270	6	full-splice_match	NFKBIE	ENST00000619360.5	2581	6	235	76	40	-76	multi-exon	FALSE	canonical	1	171955	junction_5	105807.43578142324	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	208	1293	20.0	-6	True	NA	NA
PB.10017.3	chr6	-	2594	5	novel_in_catalog	NFKBIE	novel	2581	6	NA	NA	44	21	intron_retention	FALSE	canonical	1	171955	junction_4	87388.69370912635	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	204	1268	15.0	-2	True	AAAAAG	-15
PB.10017.2	chr6	-	2242	5	novel_in_catalog	NFKBIE	novel	2581	6	NA	NA	40	-1	intron_retention	FALSE	canonical	1	7568	junction_4	175286.41270414402	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	843	1190	20.0	-6	True	NA	NA
PB.2039.1	chr11	+	2892	6	novel_in_catalog	ZFPL1	novel	2551	7	NA	NA	-2	-6	intron_retention	TRUE	canonical	1	227971	junction_5	133032.98296798428	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	2280	2612	35.0	-14	True	AATAAA	-14
PB.11088.7	chr8	-	3557	5	full-splice_match	RAB11FIP1	ENST00000287263.8	6253	5	-43	2739	-43	1402	multi-exon	FALSE	canonical	1	227101	junction_2	52079.762563662865	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	70	2019	30.0	-14	False	AATAAA	-17
PB.2039.3	chr11	+	1378	8	full-splice_match	ZFPL1	ENST00000294258.7	1371	8	-13	6	-1	-6	multi-exon	FALSE	canonical	1	227971	junction_7	116968.51185158984	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	166	1098	35.0	0	True	AATAAA	-14
PB.2039.2	chr11	+	2579	7	novel_in_catalog	ZFPL1	novel	2551	7	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	227971	junction_6	121454.05687840248	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	1967	2299	35.0	-13	True	AATAAA	-14
PB.10174.9	chr6	+	2893	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	-8	4038	-8	-4038	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	91	1458	85.0	-12	True	NA	NA
PB.10174.8	chr6	+	2537	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	-10	4396	-10	-4396	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	2	NA	TRUE	NA	NA	NA	C	coding	455	1368	93	1460	45.0	-14	True	AAAAAG	-7
PB.8660.6	chr4	-	3824	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	-52	1690	-52	-1690	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	1	NA	TRUE	NA	NA	NA	C	coding	739	2220	350	2569	55.0	-61	False	ATTAAA	-11
PB.10174.5	chr6	+	4283	12	novel_in_catalog	NT5DC1	novel	6923	12	NA	NA	-37	5102	intron_retention	FALSE	canonical	1	5973	junction_8	116600.94668137019	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	2684	3484	30.0	-41	False	ATTAAA	-23
PB.10174.4	chr6	+	3931	11	novel_in_catalog	NT5DC1	novel	6923	12	NA	NA	126	5096	intron_retention	FALSE	canonical	1	25594	junction_6	126861.84801984401	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	2519	3736	35.0	124	False	ATTAAA	-17
PB.10174.7	chr6	+	5215	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	-12	1720	-12	-1720	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	3	NA	TRUE	NA	NA	NA	C	coding	455	1368	95	1462	50.0	-16	True	AATAAA	-32
PB.10174.6	chr6	+	2161	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	-8	4770	-8	-4770	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	91	1458	80.0	-12	True	NA	NA
PB.10174.1	chr6	+	1638	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	4	5281	2	5093	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	79	1446	45.0	0	True	ATTAAA	-14
PB.8660.5	chr4	-	3886	14	full-splice_match	LETM1	ENST00000302787.2	5462	14	25	1551	25	-1551	multi-exon	FALSE	canonical	1	94664	junction_9	96103.10747674285	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	273	2492	15.0	16	False	NA	NA
PB.10174.3	chr6	+	3596	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	-64	3391	-64	-3391	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	147	1514	75.0	-68	False	ATTAAA	-17
PB.10174.2	chr6	+	3128	12	full-splice_match	NT5DC1	ENST00000319550.8	6923	12	-9	3804	-9	-3804	multi-exon	FALSE	canonical	1	25594	junction_7	121466.52707870585	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	92	1459	25.0	-13	True	AATAAA	-18
PB.2398.1	chr12	-	5226	20	novel_in_catalog	CRACR2A	novel	3207	15	NA	NA	0	2428	combination_of_known_junctions	FALSE	canonical	1	29379	junction_7	14676.410935773045	NA	5	NA	TRUE	NA	NA	NA	B	coding	732	2199	573	2771	75.0	-1	True	NA	NA
PB.3061.4	chr13	-	3211	10	incomplete-splice_match	CENPJ	ENST00000545981.5	4299	18	-65	9666	5	-3659	3prime_fragment	FALSE	canonical	1	72395	junction_9	22601.641020941515	NA	1	NA	TRUE	NA	NA	NA	C	coding	1010	3030	182	3211	65.0	-26	True	TTTAAA	-32
PB.3061.7	chr13	-	2844	8	incomplete-splice_match	CENPJ	ENST00000545981.5	4299	18	-4	20864	-4	-14857	3prime_fragment	FALSE	canonical	1	72395	junction_7	25060.737997505017	NA	1	NA	TRUE	NA	NA	NA	C	coding	908	2724	121	2844	50.0	35	True	NA	NA
PB.3061.6	chr13	-	3001	9	incomplete-splice_match	CENPJ	ENST00000545981.5	4299	18	-40	16402	30	-10395	3prime_fragment	FALSE	canonical	1	72395	junction_8	23588.351576771427	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2844	157	3000	70.0	-1	True	AAGAAA	-13
PB.3061.1	chr13	-	4368	18	novel_not_in_catalog	CENPJ	novel	5020	16	NA	NA	16	-4	any annotated donor/acceptor	FALSE	canonical	1	4657	junction_9	65869.66149080695	NA	10	3	TRUE	NA	NA	NA	C	coding	999	3000	171	3170	20.0	-15	True	AATAAA	-19
PB.3061.3	chr13	-	4242	17	novel_not_in_catalog	CENPJ	novel	5020	16	NA	NA	22	-7	any annotated donor/acceptor	FALSE	canonical	1	4657	junction_8	58611.96495010639	NA	1	NA	TRUE	NA	NA	NA	C	coding	999	3000	165	3164	20.0	-9	True	AATAAA	-16
PB.3061.2	chr13	-	4320	17	full-splice_match	CENPJ	ENST00000381884.8	4347	17	20	7	20	-7	multi-exon	FALSE	canonical	1	71663	junction_6	44000.84049512399	NA	0	NA	TRUE	NA	NA	NA	C	coding	1338	4017	167	4183	20.0	-11	True	AATAAA	-16
PB.7435.2	chr21	-	1559	6	full-splice_match	GATD3B	ENST00000624120.3	898	6	-66	-595	-13	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	85	798	15.0	NA	False	AATAAA	-16
PB.6514.9	chr2	+	2108	7	novel_not_in_catalog	ETAA1	novel	3418	6	NA	NA	-3	-144	any annotated donor/acceptor	FALSE	canonical	1	4912	junction_5	51066.69376223172	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	117	1745	30.0	0	True	AATAAA	-15
PB.7435.3	chr21	-	2043	1	novel_in_catalog	GATD3B	novel	411	6	NA	NA	6482	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	104	315	263	577	20.0	NA	False	AATAAA	-14
PB.5963.1	chr19	+	3148	8	novel_in_catalog	HKR1	novel	3472	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	8465	junction_5	49716.68641329959	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	573	2477	25.0	-26	True	NA	NA
PB.5963.2	chr19	+	2996	7	novel_in_catalog	HKR1	novel	3472	9	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	17920	junction_4	52781.821764747336	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	523	2322	20.0	-9	True	NA	NA
PB.5963.3	chr19	+	2227	5	full-splice_match	HKR1	ENST00000591485.5	664	5	-17	-1546	2	1546	multi-exon	FALSE	canonical	1	47097	junction_4	23170.90150382587	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9	True	AATACA	-35
PB.5963.4	chr19	+	3017	7	novel_in_catalog	HKR1	novel	3472	9	NA	NA	1	2	no_combination_of_known_junctions	FALSE	canonical	1	7162	junction_1	65114.17589639499	NA	11	3	TRUE	NA	NA	NA	C	coding	386	1161	1179	2339	25.0	1	True	NA	NA
PB.5963.5	chr19	+	2854	6	novel_in_catalog	HKR1	novel	3472	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	6958	junction_2	64423.17790547126	NA	1	1	TRUE	NA	NA	NA	C	coding	598	1797	387	2183	25.0	0	True	NA	NA
PB.5963.6	chr19	+	2784	5	full-splice_match	HKR1	ENST00000392153.7	2772	5	-17	5	-7	0	multi-exon	FALSE	canonical	1	40586	junction_2	54838.544881201036	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	191	2113	25.0	0	True	NA	NA
PB.5963.7	chr19	+	2703	4	novel_in_catalog	HKR1	novel	3472	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	5691	junction_1	75925.98410001385	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	228	2027	20.0	0	True	NA	NA
PB.9343.1	chr5	+	2573	1	antisense	novelGene_ARRDC3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.8039.1	chr3	-	3981	1	antisense	novelGene_CTNNB1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	120	363	1365	1727	100.0	NA	False	NA	NA
PB.7435.1	chr21	-	1600	7	full-splice_match	GATD3B	ENST00000620528.4	1640	7	44	-4	-3	4	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	28	834	10.0	NA	False	AATAAA	-21
PB.1765.8	chr11	-	2621	16	full-splice_match	NAP1L4	ENST00000526115.5	1941	16	-2	-678	-2	-3	multi-exon	FALSE	canonical	1	11436	junction_15	466082.85651247314	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	287	1447	15.0	4	True	ATTAAA	-19
PB.1765.9	chr11	-	2626	17	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	1027	-3	combination_of_known_junctions	FALSE	canonical	1	589	junction_16	465118.2336402487	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	254	1381	15.0	1308	False	ATTAAA	-19
PB.1765.4	chr11	-	2508	17	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	18588	junction_16	463392.5475313113	NA	2	NA	TRUE	NA	NA	NA	C	coding	375	1128	134	1261	10.0	-10	True	ATTAAA	-21
PB.1765.5	chr11	-	2539	16	novel_not_in_catalog	NAP1L4	novel	2479	15	NA	NA	-442	-1	any annotated donor/acceptor	FALSE	canonical	1	1509	junction_15	467148.7784895372	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	203	1363	10.0	2673	False	ATTAAA	-21
PB.1765.7	chr11	-	2583	16	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	113	0	combination_of_known_junctions	FALSE	canonical	1	65629	junction_15	441339.0562689064	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	214	1341	15.0	-19	True	ATTAAA	-16
PB.5749.6	chr19	+	2342	4	full-splice_match	ZNF791	ENST00000343325.8	4554	4	9	2203	7	1612	multi-exon	FALSE	canonical	1	118090	junction_1	45916.19207740216	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	154	1884	60.0	-9	True	NA	NA
PB.1765.1	chr11	-	4243	1	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	2622	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	121	366	2430	2795	10.0	3455	False	ATTAAA	-22
PB.1765.2	chr11	-	2620	17	novel_in_catalog	NAP1L4	novel	2479	15	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	1	11436	junction_16	464074.1291245221	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	246	1373	10.0	45	False	ATTAAA	-21
PB.1765.3	chr11	-	2418	16	full-splice_match	NAP1L4	ENST00000380542.8	2511	16	96	-3	7	-3	multi-exon	FALSE	canonical	1	177742	junction_12	409913.45056792983	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	46	1173	15.0	9	True	ATTAAA	-19
PB.8587.1	chr3	+	3357	9	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	1549925	junction_3	551494.6137780807	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	37	981	20.0	-2	True	AATAAA	-16
PB.11050.8	chr8	+	3025	3	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	-40	9059	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_2	124354.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	509	943	20.0	-34	True	AATAAA	-17
PB.9295.2	chr5	-	2806	20	novel_in_catalog	GFM2	novel	3249	21	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	1	35205	junction_4	83776.45819679894	NA	1	1	TRUE	NA	NA	NA	C	coding	531	1596	214	1809	50.0	-13	True	AATAAA	-14
PB.1222.18	chr1	+	2476	7	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	11	-33	any annotated donor/acceptor	FALSE	canonical	1	20701	junction_6	78094.16235207484	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	114	1208	10.0	2	True	TATAAA	-41
PB.9295.3	chr5	-	3532	20	novel_in_catalog	GFM2	novel	3249	21	NA	NA	2	-6	intron_retention	FALSE	canonical	1	207162	junction_19	50724.356201160015	NA	2	NA	TRUE	NA	NA	NA	C	coding	741	2226	207	2432	50.0	-6	True	AATAAA	-13
PB.804.3	chr1	-	3840	17	incomplete-splice_match	ASH1L	ENST00000392403.7	10979	28	191984	19	320	-19	5prime_fragment	FALSE	canonical	1	203981	junction_11	58534.14185618376	NA	2	NA	TRUE	NA	NA	NA	B	coding	739	2220	35	2254	65.0	-5628	False	AATAAA	-6
PB.8587.2	chr3	+	3144	10	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	70445	junction_8	896324.7233545124	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	37	954	15.0	-2	True	AATAAA	-17
PB.11286.13	chr8	+	2233	4	incomplete-splice_match	FZD6	ENST00000358755.4	3788	7	52	6785	7	-3897	3prime_fragment	FALSE	canonical	1	191219	junction_1	15377.706200861037	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	368	1747	60.0	-15	True	AATAAA	-13
PB.8556.1	chr3	+	2555	16	full-splice_match	EIF2B5	ENST00000648915.1	2538	16	-19	2	0	-2	multi-exon	FALSE	canonical	1	378505	junction_3	92790.12020444608	NA	25	NA	TRUE	NA	NA	NA	C	coding	721	2166	24	2189	10.0	-19	True	ATTAAA	-14
PB.204.1	chr1	-	2118	7	full-splice_match	GPATCH3	ENST00000361720.9	2123	7	5	0	5	0	multi-exon	FALSE	canonical	1	118364	junction_1	40218.00354215344	NA	0	NA	TRUE	NA	NA	NA	A	coding	525	1578	20	1597	20.0	-9	True	AATAAA	-16
PB.4621.2	chr16	+	3462	1	novel_in_catalog	SPATA33	novel	2190	3	NA	NA	-1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-22	True	NA	NA
PB.3862.8	chr15	+	5538	20	full-splice_match	USP8	ENST00000307179.8	4243	20	14	-1309	-3	1309	multi-exon	FALSE	canonical	1	29826	junction_6	91451.96523655906	NA	2	NA	TRUE	NA	NA	NA	C	coding	1118	3357	185	3541	30.0	-9	True	AATAAA	-24
PB.3862.9	chr15	+	4305	20	novel_in_catalog	USP8	novel	652	5	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	1	27878	junction_1	98366.37758258774	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	345	3614	15.0	-7	True	ATTAAA	-23
PB.8587.7	chr3	+	4142	5	incomplete-splice_match	EIF4A2	ENST00000426808.5	1751	10	4	4	1	-1	intron_retention	FALSE	canonical	1	824037	junction_3	687536.1106803772	NA	5	NA	TRUE	NA	NA	NA	C	coding	122	369	181	549	20.0	-1	True	AATAAA	-15
PB.12057.1	chrX	-	2452	5	full-splice_match	ZNF630	ENST00000409324.7	2455	5	2	1	2	-1	multi-exon	FALSE	canonical	1	2678	junction_4	6757.834508923698	NA	0	NA	TRUE	NA	NA	NA	A	coding	657	1974	226	2199	10.0	524	False	AATAAA	-23
PB.6085.9	chr19	-	2542	21	novel_not_in_catalog	EML2	novel	2364	19	NA	NA	-62	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	132508.40826947548	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	118	1527	20.0	0	True	AATAAA	-13
PB.3862.2	chr15	+	4160	19	novel_in_catalog	USP8	novel	652	5	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	29826	junction_6	92475.01607594838	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	199	3468	10.0	-23	True	ATTAAA	-24
PB.3862.3	chr15	+	1917	11	incomplete-splice_match	USP8	ENST00000396444.7	19026	20	20	32558	3	156	3prime_fragment	FALSE	canonical	1	29826	junction_6	106759.71550186895	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1599	319	1917	70.0	-3	True	AAAAAG	-39
PB.9637.6	chr5	+	2293	7	novel_in_catalog	TSPAN17	novel	2550	9	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	1	27327	junction_1	132337.7477743973	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	143	934	15.0	-10	True	AATAAA	-21
PB.3862.1	chr15	+	1935	12	novel_in_catalog	USP8	novel	652	5	NA	NA	1	156	combination_of_known_junctions	FALSE	canonical	1	27878	junction_1	113843.34046028792	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1599	337	1935	70.0	1	True	AAAAAG	-39
PB.3862.6	chr15	+	4235	20	full-splice_match	USP8	ENST00000307179.8	4243	20	13	-5	-4	5	multi-exon	FALSE	canonical	1	29826	junction_6	91451.96523655906	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	186	3542	10.0	-10	True	ATTAAA	-25
PB.3862.7	chr15	+	1729	11	incomplete-splice_match	USP8	ENST00000307179.8	4243	20	21	17962	-2	109	3prime_fragment	FALSE	canonical	1	29826	junction_6	104583.41696468901	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1551	178	1728	75.0	-2	True	AAAAAG	-38
PB.3862.4	chr15	+	4210	19	novel_in_catalog	USP8	novel	652	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	29826	junction_6	93700.93950977991	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	334	3603	70.0	-18	True	ACTAAA	-11
PB.3862.5	chr15	+	4011	18	novel_in_catalog	USP8	novel	652	5	NA	NA	0	5	no_combination_of_known_junctions	FALSE	canonical	1	4072	junction_6	95019.05476799622	NA	3	NA	TRUE	NA	NA	NA	C	coding	718	2157	1162	3318	10.0	-18	True	ATTAAA	-25
PB.5099.2	chr17	+	3496	14	full-splice_match	KAT7	ENST00000424009.6	3469	14	-25	-2	0	2	multi-exon	FALSE	canonical	1	51950	junction_5	123577.57829178212	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	155	1900	5.0	0	True	AATAAA	-20
PB.5099.3	chr17	+	3498	14	novel_in_catalog	KAT7	novel	9644	15	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	4094	junction_4	117211.15547208204	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	773	1906	15.0	1	True	AATAAA	-16
PB.5099.1	chr17	+	3584	15	full-splice_match	KAT7	ENST00000259021.8	9644	15	124	5936	-2	-2	multi-exon	FALSE	canonical	1	54964	junction_11	122783.99196409015	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	157	1992	15.0	-2	True	AATAAA	-16
PB.8587.8	chr3	+	3576	8	incomplete-splice_match	EIF4A2	ENST00000440191.6	1889	11	-1	4	1	-1	intron_retention	FALSE	canonical	1	780423	junction_1	734981.2803818022	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	36	983	20.0	-1	True	AATAAA	-15
PB.9406.13	chr5	-	4135	2	novel_not_in_catalog	SEMA6A	novel	6878	19	NA	NA	85	-14833	any annotated donor/acceptor	FALSE	canonical	1	3117	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	176	False	AATAAA	-15
PB.8884.2	chr4	+	4589	1	novel_in_catalog	CCSER1	novel	2684	10	NA	NA	-41791	-206303	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.11176.8	chr8	-	5814	22	novel_not_in_catalog	NCOA2	novel	8447	23	NA	NA	27955	-586	intron_retention	FALSE	canonical	1	8339	junction_21	49073.60500785651	NA	10	NA	TRUE	NA	NA	NA	C	coding	1464	4395	444	4838	60.0	731	False	NA	NA
PB.8025.8	chr3	+	2980	19	full-splice_match	WDR48	ENST00000302313.9	3707	19	12	715	-3	595	multi-exon	FALSE	canonical	1	228842	junction_17	43872.82988593986	NA	3	2	TRUE	NA	NA	NA	C	coding	677	2034	17	2050	30.0	-6	True	AATAAA	-23
PB.8025.9	chr3	+	3974	19	full-splice_match	WDR48	ENST00000302313.9	3707	19	13	-280	-2	-3	multi-exon	FALSE	canonical	1	228842	junction_17	43872.82988593986	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	16	2049	40.0	-5	True	AATAAA	-21
PB.3056.9	chr13	+	3936	8	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	34	-1	no_combination_of_known_junctions	FALSE	canonical	1	914	junction_7	49307.78374906845	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	480	1286	25.0	-8	True	AATAAA	-20
PB.3056.8	chr13	+	3751	7	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	31	-1	no_combination_of_known_junctions	FALSE	canonical	1	1788	junction_5	54450.14397414901	NA	8	NA	TRUE	NA	NA	NA	C	coding	231	696	483	1178	25.0	-11	True	AATAAA	-20
PB.3056.7	chr13	+	3884	9	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	192	2	no_combination_of_known_junctions	FALSE	canonical	1	18313	junction_8	42329.854432000764	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	322	1308	30.0	-8919	False	AATAAA	-23
PB.3056.6	chr13	+	3872	8	full-splice_match	TNFRSF19	ENST00000403372.6	4277	8	393	12	393	-1	multi-exon	FALSE	canonical	1	2153	junction_1	38451.51742660052	NA	4	1	TRUE	NA	NA	NA	C	coding	285	858	303	1160	25.0	-35	True	AATAAA	-20
PB.3056.5	chr13	+	2908	10	full-splice_match	TNFRSF19	ENST00000248484.8	3276	10	294	74	294	-74	multi-exon	FALSE	canonical	1	32776	junction_1	31324.725743234994	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	220	1473	15.0	0	True	ATTAAA	-21
PB.3056.4	chr13	+	3958	6	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	42	-1	no_combination_of_known_junctions	FALSE	canonical	1	142	junction_1	37083.511562957465	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	584	1246	25.0	0	True	AATAAA	-20
PB.3056.3	chr13	+	4191	11	novel_in_catalog	TNFRSF19	novel	3276	10	NA	NA	379	0	no_combination_of_known_junctions	FALSE	canonical	1	1027	junction_1	46241.00594331832	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	225	1478	25.0	0	True	AATAAA	-21
PB.3056.2	chr13	+	4282	11	novel_not_in_catalog	TNFRSF19	novel	3276	10	NA	NA	296	-2	any annotated donor/acceptor	FALSE	canonical	1	728	junction_9	48665.28744433757	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	218	1507	25.0	2	True	AATAAA	-19
PB.3056.1	chr13	+	4074	10	full-splice_match	TNFRSF19	ENST00000248484.8	3276	10	405	-1203	405	-1	multi-exon	FALSE	canonical	1	32776	junction_1	31324.725743234994	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	109	1362	25.0	-23	True	AATAAA	-20
PB.8025.3	chr3	+	5017	2	incomplete-splice_match	WDR48	ENST00000423296.6	563	6	-16	831	-1	-831	intron_retention	FALSE	canonical	1	247566	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-19	True	NA	NA
PB.3858.1	chr15	+	2087	11	novel_in_catalog	GALK2	novel	991	7	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	1	25117	junction_1	75491.4656162536	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	259	1704	25.0	-35	True	ATTAAA	-32
PB.3858.3	chr15	+	3213	10	full-splice_match	GALK2	ENST00000327171.7	5299	10	10	2076	0	824	multi-exon	FALSE	canonical	1	65474	junction_1	50340.77219447277	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	223	1566	85.0	-19	True	TTTAAA	-18
PB.3858.2	chr15	+	1950	10	full-splice_match	GALK2	ENST00000327171.7	5299	10	0	3349	0	4	multi-exon	FALSE	canonical	1	65474	junction_1	50340.77219447277	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	233	1576	30.0	-29	True	ATTAAA	-41
PB.3858.5	chr15	+	3082	9	novel_not_in_catalog	GALK2	novel	991	7	NA	NA	-1	5	any annotated donor/acceptor	FALSE	canonical	1	427	junction_3	96006.95471162493	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	1843	2733	40.0	-11	True	ATTAAA	-16
PB.3858.4	chr15	+	2326	10	full-splice_match	GALK2	ENST00000560031.5	2043	10	172	-455	-16	-9	multi-exon	FALSE	canonical	1	77434	junction_1	46929.242939915195	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	136	1512	35.0	-59	False	AATAAA	-16
PB.3858.7	chr15	+	1832	10	full-splice_match	GALK2	ENST00000560031.5	2043	10	222	-11	-11	0	multi-exon	FALSE	canonical	1	77434	junction_1	46929.242939915195	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	86	1462	35.0	-9	True	ATTAAA	-37
PB.3858.6	chr15	+	2042	10	full-splice_match	GALK2	ENST00000560031.5	2043	10	201	-200	0	157	multi-exon	FALSE	canonical	1	77434	junction_1	46929.242939915195	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	107	1483	35.0	-10	True	ATTAAA	-20
PB.3858.8	chr15	+	4037	10	full-splice_match	GALK2	ENST00000560031.5	2043	10	231	-2225	-2	-1139	multi-exon	FALSE	canonical	1	77434	junction_1	46929.242939915195	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	77	1453	85.0	0	True	NA	NA
PB.5210.9	chr17	+	1510	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	-21	2767	-9	0	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	150	1295	15.0	-24	True	AATAAA	-18
PB.5210.8	chr17	+	2691	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	-11	1576	0	-904	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	140	1285	20.0	-14	True	TTTAAA	-25
PB.6085.3	chr19	-	2827	20	incomplete-splice_match	EML2	ENST00000536630.5	2791	22	1283	-1	-63	-1	intron_retention	FALSE	canonical	1	47203	junction_19	104362.1732478215	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	682	2565	15.0	-1	True	AATAAA	-14
PB.10005.1	chr6	+	2347	3	full-splice_match	POLR1C	ENST00000512472.5	569	3	-5	-1773	-5	0	multi-exon	FALSE	canonical	1	417763	junction_2	120798.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	33	332	50.0	-1026	False	AATAAA	-12
PB.10005.2	chr6	+	1268	9	full-splice_match	POLR1C	ENST00000642195.1	1275	9	0	7	0	0	multi-exon	FALSE	canonical	1	417763	junction_2	84216.32072526086	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	22	1062	50.0	0	True	AATAAA	-12
PB.5210.1	chr17	+	3605	11	full-splice_match	PRKAR1A	ENST00000358598.6	3576	11	-32	3	-32	0	multi-exon	FALSE	canonical	1	218896	junction_1	661688.3540448328	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	150	1295	45.0	0	True	AATAAA	-18
PB.6085.4	chr19	-	2774	22	novel_in_catalog	EML2	novel	2364	19	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	1	4638	junction_21	128970.18673748612	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	158	2512	15.0	2999	False	AATAAA	-14
PB.5210.3	chr17	+	3340	11	full-splice_match	PRKAR1A	ENST00000358598.6	3576	11	-32	268	-32	-265	multi-exon	FALSE	canonical	1	218896	junction_1	661688.3540448328	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	150	1295	25.0	0	True	ATTAAA	-22
PB.5210.2	chr17	+	3757	12	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98250	7819	no_combination_of_known_junctions	TRUE	canonical	1	6841	junction_1	861316.5316543378	NA	0	NA	TRUE	NA	NA	NA	B	coding	381	1146	293	1438	25.0	-10	True	AATAAA	-27
PB.5210.5	chr17	+	4260	11	full-splice_match	PRKAR1A	ENST00000358598.6	3576	11	-23	-661	-23	0	multi-exon	FALSE	canonical	1	218896	junction_1	661688.3540448328	NA	4	NA	TRUE	NA	NA	NA	C	coding	381	1146	141	1286	35.0	9	True	AATAAA	-9
PB.5210.4	chr17	+	3066	11	full-splice_match	PRKAR1A	ENST00000358598.6	3576	11	-13	523	-13	-520	multi-exon	FALSE	canonical	1	218896	junction_1	661688.3540448328	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	131	1276	25.0	-16	True	ATTAAA	-26
PB.5210.7	chr17	+	3478	12	full-splice_match	PRKAR1A	ENST00000536854.6	3697	12	-48	267	-13	-264	multi-exon	FALSE	canonical	1	17540	junction_1	859381.9360246186	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	287	1432	30.0	-28	True	ATTAAA	-23
PB.5210.6	chr17	+	1492	11	full-splice_match	PRKAR1A	ENST00000358598.6	3576	11	-12	2096	-12	2	multi-exon	FALSE	canonical	1	218896	junction_1	661688.3540448328	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	130	1275	10.0	-15	True	AATAAA	-20
PB.2874.4	chr12	-	4598	18	novel_in_catalog	SART3	novel	4004	19	NA	NA	-6	340	intron_retention	FALSE	canonical	1	303792	junction_15	83348.11086327938	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	1912	3381	35.0	-7	True	NA	NA
PB.10184.5	chr6	+	2588	6	novel_not_in_catalog	NUS1	novel	4676	5	NA	NA	-16	-2056	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	17173.89871869518	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	186	1067	30.0	17	False	AATAAA	-12
PB.2874.6	chr12	-	3818	19	full-splice_match	SART3	ENST00000228284.7	4004	19	215	-29	-6	29	multi-exon	FALSE	canonical	1	303792	junction_16	82077.47537337309	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	21	2912	10.0	-7	True	AATAGA	-43
PB.2874.7	chr12	-	4256	18	novel_in_catalog	SART3	novel	4004	19	NA	NA	-4	0	intron_retention	FALSE	canonical	1	303792	junction_15	83348.11086327938	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	1910	3379	30.0	-5	True	AATAGA	-26
PB.1744.1	chr11	-	2298	2	full-splice_match	MIR210HG	ENST00000533920.1	816	2	1	-1483	1	-1	multi-exon	FALSE	canonical	1	45041	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	178	537	1	537	5.0	7388	False	NA	NA
PB.2874.2	chr12	-	4155	19	full-splice_match	SART3	ENST00000228284.7	4004	19	214	-365	-7	365	multi-exon	FALSE	canonical	1	303792	junction_16	82077.47537337309	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	22	2913	20.0	-8	True	NA	NA
PB.10184.3	chr6	+	4624	5	full-splice_match	NUS1	ENST00000368494.3	4676	5	132	-80	132	80	multi-exon	FALSE	canonical	1	161	junction_1	17572.304672409933	NA	2	NA	TRUE	NA	NA	NA	C	coding	293	882	38	919	50.0	165	False	AATAAA	-7
PB.10977.6	chr8	-	2053	2	full-splice_match	PPP1R3B	ENST00000310455.3	5548	2	19	3476	19	-168	multi-exon	FALSE	canonical	1	48166	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	136	990	70.0	1	True	NA	NA
PB.2874.8	chr12	-	3841	19	novel_in_catalog	SART3	novel	4004	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	60374	junction_15	121715.58254024466	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	19	2964	30.0	-5	True	AATAGA	-26
PB.10184.9	chr6	+	4303	5	full-splice_match	NUS1	ENST00000368494.3	4676	5	353	20	353	-20	multi-exon	FALSE	canonical	1	161	junction_1	17572.304672409933	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	69	698	70.0	386	False	AATAAA	-11
PB.8195.10	chr3	+	6292	23	novel_in_catalog	SLMAP	novel	556	2	NA	NA	52	833	no_combination_of_known_junctions	FALSE	canonical	1	63650	junction_12	99474.22454528793	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	1166	3580	30.0	-27	True	ATTAAA	-16
PB.8195.11	chr3	+	5392	23	novel_in_catalog	SLMAP	novel	556	2	NA	NA	77	0	no_combination_of_known_junctions	FALSE	canonical	1	63650	junction_12	99474.22454528793	NA	1	NA	TRUE	NA	NA	NA	C	coding	804	2415	1141	3555	30.0	-2	True	ATTAAA	-17
PB.6358.1	chr2	-	8902	12	novel_in_catalog	ASXL2	novel	12878	13	NA	NA	7	23	intron_retention	FALSE	canonical	1	1898	junction_10	50737.98475558377	NA	3	1	TRUE	NA	NA	NA	B	coding	1434	4305	238	4542	25.0	-2	True	AATAAA	-16
PB.11220.7	chr8	-	2642	10	full-splice_match	RMDN1	ENST00000406452.7	3063	10	102	319	-3	-316	multi-exon	FALSE	canonical	1	371913	junction_6	50684.12393332738	NA	5	NA	TRUE	NA	NA	NA	C	coding	314	945	59	1003	75.0	-24	True	NA	NA
PB.8302.7	chr3	-	2350	9	novel_in_catalog	NEPRO	novel	4992	9	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	6723	junction_6	113230.8154321848	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	77	1735	35.0	0	True	ATTAAA	-19
PB.4411.6	chr16	+	4408	32	full-splice_match	PHKB	ENST00000566044.5	3829	32	25	-604	-6	1	multi-exon	FALSE	canonical	1	44778	junction_1	112431.01110937304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	165	3425	95.0	-11	True	NA	NA
PB.8435.6	chr3	+	7125	6	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	16	718	intron_retention	FALSE	canonical	1	110623	junction_4	32738.395497641603	NA	2	NA	TRUE	NA	NA	NA	C	coding	1195	3588	609	4196	20.0	-12	True	AATAAA	-17
PB.11451.1	chr9	+	6860	17	novel_not_in_catalog	UHRF2	novel	3723	17	NA	NA	-20	-5	intron_retention	TRUE	canonical	1	662	junction_9	108168.70094895462	NA	1	1	TRUE	NA	NA	NA	C	coding	528	1587	319	1905	35.0	-1	True	AATAAA	-15
PB.11451.2	chr9	+	6861	15	novel_in_catalog	UHRF2	novel	3723	17	NA	NA	-19	-5	intron_retention	FALSE	canonical	1	57296	junction_10	94971.65639673658	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	318	1958	35.0	0	True	AATAAA	-15
PB.6358.2	chr2	-	7238	12	novel_in_catalog	ASXL2	novel	12878	13	NA	NA	-1	-1699	intron_retention	FALSE	canonical	1	1898	junction_10	50737.98475558377	NA	2	1	TRUE	NA	NA	NA	B	coding	1434	4305	296	4600	90.0	-4	True	NA	NA
PB.11451.4	chr9	+	3676	17	novel_not_in_catalog	UHRF2	novel	3723	17	NA	NA	3	-6	intron_retention	TRUE	canonical	1	42601	junction_5	104369.60327812689	NA	1	1	TRUE	NA	NA	NA	C	coding	522	1569	1239	2807	35.0	-9	True	AATAAA	-14
PB.8435.5	chr3	+	3627	7	incomplete-splice_match	ZBTB38	ENST00000509842.5	1434	8	44291	-2320	14	459	5prime_fragment	FALSE	canonical	1	29247	junction_4	60399.25370583831	NA	1	NA	TRUE	NA	NA	NA	C	coding	924	2772	856	3627	55.0	-14	True	NA	NA
PB.11451.6	chr9	+	6734	15	novel_in_catalog	UHRF2	novel	3723	17	NA	NA	16	-5	intron_retention	FALSE	canonical	1	33746	junction_10	97707.95888229308	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	283	1923	35.0	4	True	AATAAA	-15
PB.11451.7	chr9	+	3196	16	full-splice_match	UHRF2	ENST00000276893.9	3452	16	251	5	156	-5	multi-exon	FALSE	canonical	1	57296	junction_11	94007.1337221218	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	587	2326	35.0	252	False	AATAAA	-15
PB.11451.8	chr9	+	3301	15	novel_in_catalog	UHRF2	novel	3723	17	NA	NA	16	-5	intron_retention	FALSE	canonical	1	14310	junction_2	107997.67950032113	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	767	2431	35.0	4	True	AATAAA	-15
PB.8463.10	chr3	+	1664	11	full-splice_match	RNF13	ENST00000344229.7	2866	11	434	768	0	-20	multi-exon	FALSE	canonical	1	24313	junction_1	147406.31419257453	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	269	1414	90.0	-11	True	AATGAA	-10
PB.629.5	chr1	+	2140	4	full-splice_match	DCLRE1B	ENST00000650450.1	3734	4	-19	1613	-5	9	multi-exon	FALSE	canonical	1	102506	junction_1	4190.0460883171945	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	260	1858	25.0	-19	True	NA	NA
PB.8435.4	chr3	+	4305	6	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	14	83	combination_of_known_junctions	FALSE	canonical	1	110623	junction_4	32738.395497641603	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3588	611	4198	75.0	-14	True	NA	NA
PB.629.3	chr1	+	3278	3	full-splice_match	DCLRE1B	ENST00000648795.1	1960	3	-15	-1303	-15	-305	multi-exon	FALSE	canonical	1	42086	junction_1	34733.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	482	1702	70.0	-29	True	AAGAAA	-35
PB.629.2	chr1	+	3456	4	full-splice_match	DCLRE1B	ENST00000650450.1	3734	4	-41	319	-27	-305	multi-exon	FALSE	canonical	1	102506	junction_1	4190.0460883171945	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	282	1880	70.0	-41	True	AAGAAA	-35
PB.629.1	chr1	+	3596	3	full-splice_match	DCLRE1B	ENST00000648795.1	1960	3	-27	-1609	-27	1	multi-exon	TRUE	canonical	1	42086	junction_1	34733.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	494	1714	30.0	-41	True	NA	NA
PB.8302.4	chr3	-	2336	9	full-splice_match	NEPRO	ENST00000314400.9	4992	9	175	2481	0	-4	multi-exon	FALSE	canonical	1	125253	junction_8	79909.18940888072	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	21	1721	35.0	1	True	ATTAAA	-19
PB.8463.12	chr3	+	2466	10	novel_not_in_catalog	RNF13	novel	2843	10	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	6550	junction_1	143256.01483547981	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	289	1434	25.0	0	True	AATAAA	-26
PB.6358.6	chr2	-	4714	12	novel_in_catalog	ASXL2	novel	12878	13	NA	NA	-2	9	intron_retention	FALSE	canonical	1	1898	junction_10	50737.98475558377	NA	2	1	TRUE	NA	NA	NA	B	coding	1434	4305	297	4601	45.0	-5	True	AATAAA	-23
PB.12191.2	chrX	-	3096	5	novel_in_catalog	ARMCX2	novel	2663	3	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	42943	junction_2	126576.34118067838	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	794	2692	35.0	0	True	AATAAA	-20
PB.12191.3	chrX	-	2857	6	full-splice_match	ARMCX2	ENST00000356824.8	2674	6	-2	-181	-2	-5	multi-exon	FALSE	canonical	1	173314	junction_4	57734.853464436885	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	555	2453	35.0	-44	False	AATAAA	-20
PB.10487.10	chr7	+	4609	23	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	29	13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	201279.64679848362	NA	2	NA	TRUE	NA	NA	NA	B	coding	927	2784	178	2961	20.0	11	True	ATTAAA	-29
PB.10487.11	chr7	+	4615	22	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	41	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	218426.3397365828	NA	121	10	TRUE	NA	NA	NA	B	coding	1086	3261	166	3426	35.0	0	True	AATAAA	-21
PB.10487.12	chr7	+	4779	24	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	42	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	214003.00507883355	NA	3	NA	TRUE	NA	NA	NA	B	coding	932	2799	165	2963	35.0	1	True	AATAAA	-14
PB.10487.13	chr7	+	4675	23	novel_not_in_catalog	ANLN	novel	4787	24	NA	NA	42	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	229742.28358768145	NA	6	1	TRUE	NA	NA	NA	B	coding	895	2688	165	2852	35.0	1	True	AATAAA	-21
PB.10019.7	chr6	+	6736	16	full-splice_match	CDC5L	ENST00000371477.3	6423	16	185	-498	185	498	multi-exon	FALSE	canonical	1	416522	junction_6	113056.18427301239	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	115	2523	30.0	0	True	NA	NA
PB.10019.6	chr6	+	4772	16	full-splice_match	CDC5L	ENST00000371477.3	6423	16	185	1466	185	-1466	multi-exon	FALSE	canonical	1	416522	junction_6	113056.18427301239	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	115	2523	20.0	0	True	NA	NA
PB.10019.5	chr6	+	2429	16	full-splice_match	CDC5L	ENST00000371477.3	6423	16	200	3794	200	-3794	multi-exon	FALSE	canonical	1	416522	junction_6	113056.18427301239	NA	11	2	TRUE	NA	NA	NA	C	coding	776	2328	100	2427	65.0	15	True	NA	NA
PB.10019.4	chr6	+	4971	16	full-splice_match	CDC5L	ENST00000371477.3	6423	16	175	1277	175	-1277	multi-exon	TRUE	canonical	1	416522	junction_6	113056.18427301239	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	125	2533	50.0	-10	True	AATAAA	-17
PB.10019.9	chr6	+	2627	15	novel_in_catalog	CDC5L	novel	6423	16	NA	NA	189	-3409	no_combination_of_known_junctions	FALSE	canonical	1	6412	junction_13	181887.99608224927	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	111	2321	80.0	4	True	AAAAAG	-36
PB.10019.8	chr6	+	2254	15	incomplete-splice_match	CDC5L	ENST00000371477.3	6423	16	185	4723	185	-4723	3prime_fragment	FALSE	canonical	1	416522	junction_6	85664.43882265862	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2139	115	2253	55.0	0	True	GATAAA	-45
PB.2419.13	chr12	-	6579	39	novel_in_catalog	AC006064.6	novel	8502	55	NA	NA	-43	-13152	intron_retention	FALSE	canonical	1	448723	junction_36	373310.76816204225	NA	8	3	TRUE	NA	NA	NA	B	coding	1933	5802	190	5991	15.0	-2	True	AATAAA	-12
PB.2419.12	chr12	-	6500	40	full-splice_match	CHD4	ENST00000646806.1	6359	40	-38	-103	1	2	multi-exon	FALSE	canonical	1	260697	junction_32	386868.10333116027	NA	15	5	TRUE	NA	NA	NA	C	coding	1892	5679	231	5909	10.0	6128	False	AATAAA	-15
PB.10813.1	chr7	+	2203	1	antisense	novelGene_WASL_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-8078	False	NA	NA
PB.6357.2	chr2	-	2340	19	novel_in_catalog	DTNB	novel	2328	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	88167	junction_2	25772.72277519225	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	194	2002	15.0	-23	True	AAAAAG	-5
PB.2124.28	chr11	+	2816	6	novel_not_in_catalog	PPP6R3	novel	5093	24	NA	NA	-5693	0	any annotated donor/acceptor	FALSE	canonical	1	2191	junction_2	220019.75034346347	NA	5	2	TRUE	NA	NA	NA	C	coding	130	393	210	602	20.0	NA	False	AATAAA	-21
PB.8587.10	chr3	+	2985	9	incomplete-splice_match	EIF4A2	ENST00000426808.5	1751	10	4	4	1	-1	intron_retention	FALSE	canonical	1	824037	junction_3	895055.000645203	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	181	978	20.0	-1	True	AATAAA	-15
PB.2124.25	chr11	+	4930	23	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	8921	junction_14	155722.05377045882	NA	1	NA	TRUE	NA	NA	NA	C	coding	827	2484	233	2716	20.0	1	True	AATAAA	-21
PB.2124.24	chr11	+	4917	23	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2692	junction_1	153239.62440789095	NA	12	NA	TRUE	NA	NA	NA	C	coding	873	2622	82	2703	20.0	1	True	AATAAA	-21
PB.2583.20	chr12	-	2881	3	novel_not_in_catalog	AC073610.3	novel	939	5	NA	NA	-100	-32708	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	625375.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	79	240	258	497	15.0	11	True	ATTAAA	-12
PB.2124.26	chr11	+	4277	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	37865	junction_15	155055.68448358472	NA	5	1	TRUE	NA	NA	NA	C	coding	856	2571	232	2802	25.0	2	True	AATAAA	-14
PB.2124.21	chr11	+	4249	23	full-splice_match	PPP6R3	ENST00000524845.5	2771	23	-3	-1475	-1	0	multi-exon	FALSE	canonical	1	101206	junction_14	143526.04227289435	NA	1	NA	TRUE	NA	NA	NA	C	coding	844	2535	240	2774	25.0	-6	True	AATAAA	-14
PB.2124.20	chr11	+	5096	24	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	8921	junction_15	197834.19679322484	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	369	2882	20.0	-8	True	AATAAA	-21
PB.2124.23	chr11	+	3546	24	full-splice_match	PPP6R3	ENST00000393800.6	5093	24	21	1526	0	-74	multi-exon	FALSE	canonical	1	173470	junction_1	130724.7712184398	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	234	2855	10.0	0	True	GATAAA	-23
PB.2124.22	chr11	+	4460	25	novel_in_catalog	PPP6R3	novel	560	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	97819	junction_1	155516.09974888185	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	364	2985	25.0	-3	True	AATAAA	-14
PB.1860.2	chr11	-	3114	1	full-splice_match	FANCF	ENST00000327470.5	2952	1	0	-162	0	162	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	374	1125	32	1156	55.0	-19	True	AGTAAA	-19
PB.1860.3	chr11	-	2676	1	full-splice_match	FANCF	ENST00000327470.5	2952	1	265	11	265	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	230	693	199	891	60.0	246	False	AATAAA	-16
PB.1860.1	chr11	-	4197	1	full-splice_match	FANCF	ENST00000327470.5	2952	1	22	-1267	22	1267	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	374	1125	10	1134	5.0	3	True	NA	NA
PB.1860.6	chr11	-	1687	1	full-splice_match	FANCF	ENST00000327470.5	2952	1	-12	1277	-12	-1277	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	374	1125	44	1168	25.0	-31	False	ATTAAA	-13
PB.1860.4	chr11	-	2621	1	full-splice_match	FANCF	ENST00000327470.5	2952	1	158	173	158	-173	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	coding	230	693	306	998	20.0	139	False	AATAAA	-17
PB.1860.5	chr11	-	2496	1	full-splice_match	FANCF	ENST00000327470.5	2952	1	-9	465	-9	-465	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	374	1125	41	1165	65.0	-28	False	NA	NA
PB.11969.4	chrX	+	1959	2	novel_not_in_catalog	TMSB4X	novel	628	3	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-11
PB.8302.2	chr3	-	4722	8	full-splice_match	NEPRO	ENST00000473284.5	2056	8	130	-2796	2	-3	multi-exon	FALSE	canonical	1	68098	junction_7	95619.63837293796	NA	4	NA	TRUE	NA	NA	NA	C	coding	470	1413	221	1633	20.0	-11	False	NA	NA
PB.896.1	chr1	-	2353	11	full-splice_match	ALDH9A1	ENST00000354775.4	2696	11	341	2	-9	-2	multi-exon	FALSE	canonical	1	390244	junction_10	218185.58632723655	NA	2	NA	TRUE	NA	NA	NA	C	coding	494	1485	37	1521	15.0	59	False	AATAAA	-16
PB.5331.7	chr17	-	1784	13	full-splice_match	PCYT2	ENST00000538936.6	5147	13	17	3346	-15	15	multi-exon	FALSE	canonical	1	232143	junction_12	117890.12429624177	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	93	1262	10.0	6700	False	AAAACA	-36
PB.5331.6	chr17	-	2352	14	novel_not_in_catalog	PCYT2	novel	5147	13	NA	NA	8	15	any annotated donor/acceptor	TRUE	canonical	1	18178	junction_7	231262.31572614194	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	1168	1830	10.0	6691	False	AAAACA	-36
PB.5331.5	chr17	-	1815	14	full-splice_match	PCYT2	ENST00000538721.6	1765	14	5	-55	5	38	multi-exon	FALSE	canonical	1	84025	junction_7	189905.19649186902	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	47	1270	30.0	-3	True	NA	NA
PB.5331.4	chr17	-	2103	13	full-splice_match	PCYT2	ENST00000570388.5	1474	13	-51	-578	1	92	multi-exon	FALSE	canonical	1	25557	junction_11	179442.35028716977	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	569	1504	5.0	-7	True	AATAAA	-16
PB.5331.3	chr17	-	1864	13	full-splice_match	PCYT2	ENST00000538936.6	5147	13	46	3237	0	124	multi-exon	FALSE	canonical	1	232143	junction_12	117890.12429624177	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	64	1233	35.0	-20	True	GGGGCT	-22
PB.5331.2	chr17	-	2661	13	full-splice_match	PCYT2	ENST00000538936.6	5147	13	65	2421	7	940	multi-exon	FALSE	canonical	1	232143	junction_12	117890.12429624177	NA	2	NA	TRUE	NA	NA	NA	C	coding	389	1170	45	1214	25.0	-1	True	NA	NA
PB.5331.1	chr17	-	3155	13	full-splice_match	PCYT2	ENST00000538936.6	5147	13	55	1937	1	1424	multi-exon	FALSE	canonical	1	232143	junction_12	117890.12429624177	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	55	1224	20.0	-11	True	NA	NA
PB.10874.7	chr7	-	3109	4	novel_in_catalog	ZC3HAV1L	novel	1753	5	NA	NA	-10	1199	intron_retention	FALSE	canonical	1	77534	junction_1	3579.9449095699165	NA	3	NA	TRUE	NA	NA	NA	C	coding	298	897	23	919	35.0	0	True	ATTAAA	-17
PB.55.3	chr1	-	2438	10	novel_not_in_catalog	NOL9	novel	6649	12	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58072.90681314649	NA	10	1	TRUE	NA	NA	NA	C	coding	542	1629	35	1663	30.0	-24	True	ATTAAA	-17
PB.10855.2	chr7	-	2005	9	full-splice_match	AKR1B1	ENST00000465351.5	1930	9	-43	-32	-3	-5	multi-exon	FALSE	canonical	1	702870	junction_1	422861.4623717648	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	84	875	5.0	38	False	AATAAA	-16
PB.2843.1	chr12	+	1387	2	full-splice_match	ASCL1	ENST00000266744.3	2472	2	-12	1097	-12	-1097	multi-exon	FALSE	canonical	1	46689	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	230	693	590	1282	85.0	0	True	NA	NA
PB.5329.16	chr17	-	1922	11	full-splice_match	P4HB	ENST00000331483.8	2603	11	113	568	-8	222	multi-exon	FALSE	canonical	1	5402503	junction_10	1477397.3039087218	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	111	1637	10.0	9386	False	NA	NA
PB.2531.9	chr12	-	3193	8	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	4	-9	any annotated donor/acceptor	FALSE	canonical	1	2911	junction_6	71993.0471620244	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	409	1074	45.0	-10	True	AATAAA	-15
PB.5329.14	chr17	-	2338	10	full-splice_match	P4HB	ENST00000439918.6	1502	10	-4	-832	2	-1	multi-exon	FALSE	canonical	1	10943	junction_8	2826699.7195765153	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	94	1488	5.0	9403	False	AATAAA	-17
PB.5329.15	chr17	-	2348	10	novel_in_catalog	P4HB	novel	2603	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	12206	junction_1	2729901.5376167367	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	64	1503	10.0	0	True	AATAAA	-12
PB.5329.12	chr17	-	2771	10	novel_in_catalog	P4HB	novel	2603	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	5402503	junction_9	1552906.5845637918	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	64	1605	5.0	0	True	AATAAA	-18
PB.5329.13	chr17	-	2457	11	novel_not_in_catalog	P4HB	novel	2603	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	23304	junction_2	2678535.407946442	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	146	1606	5.0	9351	False	AATAAA	-18
PB.8037.3	chr3	+	3891	6	novel_not_in_catalog	ZNF621	novel	1979	5	NA	NA	6	-241	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	38202.91370772653	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	447	1766	30.0	-9	True	NA	NA
PB.5329.11	chr17	-	2951	9	novel_in_catalog	P4HB	novel	2603	11	NA	NA	-13	0	intron_retention	FALSE	canonical	1	5402503	junction_8	1615706.067896551	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	116	1699	5.0	9381	False	AATAAA	-18
PB.2531.1	chr12	-	3291	7	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	2	161	any annotated donor/acceptor	FALSE	canonical	1	14570	junction_4	57942.21914305856	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	337	1002	35.0	-12	True	AATAAA	-15
PB.2531.2	chr12	-	3149	6	full-splice_match	SINHCAF	ENST00000337682.8	3163	6	175	-161	2	161	multi-exon	FALSE	canonical	1	14570	junction_4	43667.472702687985	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	195	860	35.0	-12	True	AATAAA	-15
PB.2531.3	chr12	-	3058	7	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	-6	-9	any annotated donor/acceptor	FALSE	canonical	1	14570	junction_4	57942.21914305856	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	274	939	45.0	-3	True	AATAAA	-15
PB.2531.4	chr12	-	2842	6	full-splice_match	SINHCAF	ENST00000337682.8	3163	6	312	9	56	-9	multi-exon	FALSE	canonical	1	14570	junction_4	43667.472702687985	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	58	723	45.0	174	False	AATAAA	-15
PB.2531.6	chr12	-	3166	7	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	3	-6	any annotated donor/acceptor	FALSE	canonical	1	11082	junction_6	49672.77501699385	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	379	1044	30.0	-1	True	AATAAA	-18
PB.2531.7	chr12	-	3467	7	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	-3	-9	any annotated donor/acceptor	FALSE	canonical	1	858	junction_6	50186.260608745186	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	683	1348	45.0	-17	True	AATAAA	-15
PB.5754.26	chr19	-	2275	10	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	-4	-169	intron_retention	FALSE	canonical	1	168962	junction_9	177759.9815390557	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	702	1388	90.0	-5	True	NA	NA
PB.6419.13	chr2	-	3561	1	novel_in_catalog	PRKD3	novel	695	5	NA	NA	360	-3636	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	822	False	NA	NA
PB.9911.6	chr6	+	4951	13	novel_in_catalog	BRD2	novel	4894	13	NA	NA	-56	38	intron_retention	FALSE	canonical	1	46222	junction_7	763352.9797817934	NA	2	1	TRUE	NA	NA	NA	C	coding	399	1200	3146	4345	20.0	1	True	AATAAA	-30
PB.11971.3	chrX	+	3271	5	novel_not_in_catalog	TCEANC	novel	2537	3	NA	NA	-22	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	7911.136707199541	NA	4	NA	TRUE	NA	NA	NA	B	coding	351	1056	374	1429	35.0	26	True	AATAAA	-15
PB.11971.2	chrX	+	2593	5	novel_not_in_catalog	TCEANC	novel	2537	3	NA	NA	-48	-77	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	8073.119889485105	NA	0	NA	TRUE	NA	NA	NA	B	coding	351	1056	351	1406	10.0	0	True	AATAAA	-17
PB.11971.1	chrX	+	2803	5	novel_not_in_catalog	TCEANC	novel	2537	3	NA	NA	-72	-56	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	8063.15320997313	NA	0	NA	TRUE	NA	NA	NA	B	coding	351	1056	540	1595	35.0	-24	True	AATAAA	-38
PB.10530.12	chr7	-	3422	10	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	3	0	intron_retention	FALSE	canonical	1	351959	junction_9	90809.00001651818	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	125	1087	90.0	7752	False	NA	NA
PB.11971.5	chrX	+	3187	4	novel_not_in_catalog	TCEANC	novel	2537	3	NA	NA	38	-10	any annotated donor/acceptor	FALSE	canonical	1	3077	junction_3	7168.021530845639	NA	5	1	TRUE	NA	NA	NA	B	coding	381	1146	207	1352	40.0	86	False	AATAAA	-8
PB.11971.4	chrX	+	2580	4	novel_not_in_catalog	TCEANC	novel	2537	3	NA	NA	-8	-82	any annotated donor/acceptor	FALSE	canonical	1	3077	junction_3	7168.021530845639	NA	0	NA	TRUE	NA	NA	NA	B	coding	381	1146	253	1398	30.0	40	True	AATAAA	-12
PB.5822.1	chr19	+	2345	12	full-splice_match	COLGALT1	ENST00000252599.8	3704	12	64	1295	64	994	multi-exon	FALSE	canonical	1	283323	junction_1	272523.988293426	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	57	1925	15.0	-24	True	TTTAAA	-16
PB.5822.2	chr19	+	3554	11	novel_in_catalog	COLGALT1	novel	3704	12	NA	NA	27	-3	combination_of_known_junctions	FALSE	canonical	1	10394	junction_5	365275.32276758034	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	94	1842	20.0	-61	True	AATAAA	-19
PB.5822.3	chr19	+	3544	13	novel_not_in_catalog	COLGALT1	novel	3704	12	NA	NA	33	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	337420.05767498305	NA	6	NA	TRUE	NA	NA	NA	C	coding	529	1590	241	1830	15.0	-55	True	AATAAA	-21
PB.5822.4	chr19	+	3416	12	full-splice_match	COLGALT1	ENST00000252599.8	3704	12	285	3	285	-3	multi-exon	FALSE	canonical	1	283323	junction_1	272523.988293426	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	115	1704	20.0	-51	False	AATAAA	-19
PB.5822.5	chr19	+	3723	13	novel_not_in_catalog	COLGALT1	novel	3704	12	NA	NA	101	-1	any annotated donor/acceptor	FALSE	canonical	1	9851	junction_6	385836.174458582	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	897	2006	10.0	13	True	AATAAA	-24
PB.121.1	chr1	-	4225	3	novel_not_in_catalog	NBPF1	novel	5932	29	NA	NA	1	-7	any annotated donor/acceptor	FALSE	canonical	1	23423	junction_1	80496.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	2	True	NA	NA
PB.8853.65	chr4	-	3340	24	full-splice_match	SEC31A	ENST00000513858.5	3687	24	-27	374	-2	3	multi-exon	FALSE	canonical	1	277702	junction_5	296740.48341385456	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	98	3301	70.0	-39	True	NA	NA
PB.8888.1	chr4	-	3379	8	full-splice_match	TSPAN5	ENST00000305798.7	3365	8	-15	1	-15	-1	multi-exon	FALSE	canonical	1	187183	junction_6	76068.29089411054	NA	1	NA	TRUE	NA	NA	NA	A	coding	268	807	419	1225	15.0	141	False	AATAAA	-31
PB.8543.1	chr3	+	3730	3	antisense	novelGene_LINC01994_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	22	junction_2	51.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-18
PB.6923.1	chr2	-	2779	12	full-splice_match	HSPD1	ENST00000388968.7	2455	12	181	-505	0	505	multi-exon	FALSE	canonical	1	616249	junction_9	725493.8293174421	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	88	1809	45.0	-1	True	NA	NA
PB.1886.8	chr11	+	4876	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	9	-777	9	777	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	181	2310	30.0	0	True	TATAAA	-13
PB.1886.9	chr11	+	3422	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	38	648	-11	44	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	152	2281	25.0	-679	False	AATAAA	-17
PB.1886.2	chr11	+	4572	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	-13	-451	-13	451	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	203	2332	15.0	-22	True	NA	NA
PB.1886.3	chr11	+	4359	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	-13	-238	-13	238	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	203	2332	45.0	-22	True	TATAAA	-23
PB.12351.4	chrX	+	3253	9	novel_in_catalog	GDI1	novel	786	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1547968	junction_1	474087.41164102254	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	102	824	20.0	-11	True	AATAAA	-14
PB.1886.1	chr11	+	4082	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	26	0	-23	0	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	164	2293	10.0	17	True	AATAAA	-22
PB.1886.6	chr11	+	4169	20	novel_not_in_catalog	CAPRIN1	novel	4108	19	NA	NA	-10	1	any annotated donor/acceptor	FALSE	canonical	1	788	junction_8	743199.0213457532	NA	3	1	TRUE	NA	NA	NA	C	coding	410	1233	1147	2379	10.0	-19	True	AATAAA	-23
PB.1886.7	chr11	+	3546	18	full-splice_match	CAPRIN1	ENST00000389645.7	3498	18	-44	-4	5	0	multi-exon	FALSE	canonical	1	425988	junction_1	490906.6260590904	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	185	2269	35.0	-4	True	NA	NA
PB.1886.4	chr11	+	2496	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	-13	1625	-13	17	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	203	2332	40.0	-22	True	CATAAA	-29
PB.1886.5	chr11	+	5068	19	full-splice_match	CAPRIN1	ENST00000341394.8	4108	19	-12	-948	-12	948	multi-exon	FALSE	canonical	1	425988	junction_1	477811.8675200394	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	202	2331	15.0	-21	True	ATTAAA	-32
PB.4017.3	chr15	+	2771	10	novel_in_catalog	MORF4L1	novel	2274	13	NA	NA	14	0	intron_retention	FALSE	canonical	1	7073	junction_5	257115.09496078087	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	118	750	35.0	-4801	False	AATAAA	-18
PB.4017.2	chr15	+	1880	13	full-splice_match	MORF4L1	ENST00000331268.9	2359	13	76	403	3	0	multi-exon	FALSE	canonical	1	706	junction_10	243854.72323033452	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	129	1217	35.0	0	True	AATAAA	-18
PB.4017.1	chr15	+	1178	12	full-splice_match	MORF4L1	ENST00000426013.6	1880	12	197	505	0	151	multi-exon	FALSE	canonical	1	706	junction_9	250593.92962937252	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	46	1017	0.0	-4729	False	AATAAA	-14
PB.8452.5	chr3	-	3549	18	novel_in_catalog	PLOD2	novel	3043	10	NA	NA	-17	-19	no_combination_of_known_junctions	FALSE	canonical	1	6287	junction_5	190789.2408801381	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	196	2295	65.0	-1	True	NA	NA
PB.8452.2	chr3	-	3588	20	full-splice_match	PLOD2	ENST00000282903.9	3732	20	121	23	-54	-19	multi-exon	FALSE	canonical	1	434023	junction_19	121532.27213077479	NA	1	NA	TRUE	NA	NA	NA	C	coding	758	2277	58	2334	65.0	-38	True	NA	NA
PB.8452.3	chr3	-	3719	21	novel_in_catalog	PLOD2	novel	3043	10	NA	NA	71	1	combination_of_known_junctions	FALSE	canonical	1	17698	junction_18	226078.01046848297	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	457	2445	25.0	18	True	AATAAA	-11
PB.4017.5	chr15	+	1772	12	full-splice_match	MORF4L1	ENST00000559345.5	1468	12	37	-341	-1	0	multi-exon	FALSE	canonical	1	706	junction_9	251938.4748365992	NA	2	NA	TRUE	NA	NA	NA	C	coding	235	708	402	1109	35.0	-3	True	AATAAA	-18
PB.4017.4	chr15	+	1653	12	full-splice_match	MORF4L1	ENST00000426013.6	1880	12	224	3	-5	0	multi-exon	FALSE	canonical	1	706	junction_9	250593.92962937252	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	19	990	35.0	-5	True	AATAAA	-18
PB.10802.7	chr7	+	2152	16	novel_in_catalog	ST7	novel	2114	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	1	4190	junction_1	105438.5639747094	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	394	1908	20.0	0	True	AATAAA	-19
PB.10802.5	chr7	+	1948	15	full-splice_match	ST7	ENST00000393451.7	2110	15	159	3	-2	1	multi-exon	FALSE	canonical	1	141195	junction_6	59826.27207462402	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	41	1705	20.0	0	True	AATAAA	-18
PB.10802.4	chr7	+	2714	15	novel_in_catalog	ST7	novel	2114	14	NA	NA	-34	-10	combination_of_known_junctions	FALSE	canonical	1	73094	junction_14	78172.91674844419	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	109	1797	60.0	-4755	False	NA	NA
PB.10802.3	chr7	+	2097	16	full-splice_match	ST7	ENST00000323984.7	2142	16	43	2	43	2	multi-exon	FALSE	canonical	1	112056	junction_6	71962.34436876615	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	120	1853	20.0	-4766	False	AATAAA	-19
PB.10802.2	chr7	+	2055	16	novel_not_in_catalog	ST7	novel	2114	14	NA	NA	-9	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	89260.75539317378	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	147	1811	20.0	-2	True	AATAAA	-19
PB.10802.1	chr7	+	2830	17	novel_not_in_catalog	ST7	novel	2114	14	NA	NA	-13	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	102790.05292456258	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	156	1913	60.0	-6	True	NA	NA
PB.8452.9	chr3	-	2803	20	full-splice_match	PLOD2	ENST00000282903.9	3732	20	-33	962	-33	-161	multi-exon	FALSE	canonical	1	434023	junction_19	121532.27213077479	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	212	2488	65.0	2522	False	GATAAA	-13
PB.560.6	chr1	+	5476	33	novel_in_catalog	AGL	novel	7368	34	NA	NA	5	-2063	intron_retention	FALSE	canonical	1	70530	junction_1	40245.46665404873	NA	0	NA	TRUE	NA	NA	NA	C	coding	1260	3783	1388	5170	75.0	-37	True	AAGAAA	-32
PB.8373.2	chr3	+	2819	6	incomplete-splice_match	PODXL2	ENST00000342480.6	2186	8	4	2248	4	-2248	3prime_fragment	FALSE	canonical	1	127065	junction_1	129266.619809756	NA	4	NA	TRUE	NA	NA	NA	C	coding	486	1461	36	1496	45.0	-16	True	AATATA	-17
PB.8373.3	chr3	+	2182	8	full-splice_match	PODXL2	ENST00000342480.6	2186	8	4	0	4	0	multi-exon	FALSE	canonical	1	127065	junction_1	114162.8065970807	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	36	1853	15.0	-16	True	ATTAAA	-37
PB.8373.1	chr3	+	2849	7	incomplete-splice_match	PODXL2	ENST00000342480.6	2186	8	-9	0	-9	0	intron_retention	FALSE	canonical	1	127065	junction_1	119857.92183073814	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	49	1740	15.0	-29	True	ATTAAA	-37
PB.6923.6	chr2	-	3190	10	novel_in_catalog	HSPD1	novel	2455	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	616249	junction_7	775386.8929112377	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	1657	2730	30.0	-1	True	AATAAA	-16
PB.8821.1	chr4	-	4340	1	antisense	novelGene_MTHFD2L_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.535.4	chr1	-	4307	17	full-splice_match	TGFBR3	ENST00000212355.8	6465	17	76	2082	-52	-1	multi-exon	FALSE	canonical	1	66492	junction_9	34374.91470347372	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	440	2995	95.0	-5	True	NA	NA
PB.8468.9	chr3	-	825	3	full-splice_match	SERP1	ENST00000239944.6	3171	3	125	2221	-15	77	multi-exon	FALSE	canonical	1	2781995	junction_1	415581.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-21	True	AATAAA	-27
PB.9911.9	chr6	+	3314	11	incomplete-splice_match	BRD2	ENST00000482914.5	4834	14	-32	3317	-9	-9	3prime_fragment	FALSE	canonical	1	239763	junction_1	751124.3264742794	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1275	2040	3314	75.0	-16	True	NA	NA
PB.8468.5	chr3	-	4055	2	full-splice_match	SERP1	ENST00000491660.1	830	2	-7	-3218	-5	-181	multi-exon	FALSE	canonical	1	3613157	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-11	True	AATAAA	-20
PB.8468.4	chr3	-	2852	3	full-splice_match	SERP1	ENST00000239944.6	3171	3	134	185	-6	-181	multi-exon	FALSE	canonical	1	2781995	junction_1	415581.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-12	True	AATAAA	-20
PB.8468.7	chr3	-	4006	1	novel_in_catalog	SERP1	novel	3171	3	NA	NA	-15	-513	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-21	True	AATAAA	-17
PB.9911.8	chr6	+	3136	10	novel_not_in_catalog	BRD2	novel	4894	13	NA	NA	239	-14	intron_retention	FALSE	canonical	1	5979	junction_1	672959.3511295215	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1635	1501	3135	70.0	-9529	False	NA	NA
PB.8468.1	chr3	-	3001	3	full-splice_match	SERP1	ENST00000239944.6	3171	3	117	53	-23	-49	multi-exon	FALSE	canonical	1	2781995	junction_1	415581.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-29	True	NA	NA
PB.8468.2	chr3	-	4235	2	full-splice_match	SERP1	ENST00000491660.1	830	2	-2	-3403	0	0	multi-exon	FALSE	canonical	1	3613157	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-6	True	ATTAAA	-22
PB.3322.19	chr14	-	4291	18	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	23	-1	combination_of_known_junctions	FALSE	canonical	1	181709	junction_9	446622.6094474163	NA	0	NA	TRUE	NA	NA	NA	C	coding	1230	3693	19	3711	20.0	5	True	AATAAA	-16
PB.3322.18	chr14	-	4617	12	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	112282	junction_11	525217.7538659718	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	3468	4037	20.0	-11	True	AATAAA	-16
PB.3303.9	chr14	-	7174	38	full-splice_match	CHD8	ENST00000645929.1	7422	38	-43	291	-7	2	multi-exon	FALSE	canonical	1	26725	junction_36	117183.75427449033	NA	2	NA	TRUE	NA	NA	NA	C	coding	2302	6909	145	7053	90.0	-22	True	NA	NA
PB.3303.6	chr14	-	7421	38	full-splice_match	CHD8	ENST00000645929.1	7422	38	3	-2	3	0	multi-exon	FALSE	canonical	1	26725	junction_36	117183.75427449033	NA	6	NA	TRUE	NA	NA	NA	C	coding	2302	6909	99	7007	5.0	24	True	AATAAA	-16
PB.3322.14	chr14	-	2735	12	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	-20	0	intron_retention	FALSE	canonical	1	183391	junction_11	473637.26447998435	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	439	2154	20.0	-21	True	AATAAA	-17
PB.3303.4	chr14	-	8491	38	novel_in_catalog	CHD8	novel	7422	38	NA	NA	4	0	intron_retention	FALSE	canonical	1	39460	junction_15	119051.71221281131	NA	1	NA	TRUE	NA	NA	NA	C	coding	2589	7770	307	8076	10.0	-11	True	AATAAA	-17
PB.3322.16	chr14	-	7816	17	novel_in_catalog	ACIN1	novel	2751	12	NA	NA	5	0	intron_retention	FALSE	canonical	1	248155	junction_14	405635.16029138933	NA	1	NA	TRUE	NA	NA	NA	C	coding	746	2241	37	2277	20.0	-13	True	AATAAA	-17
PB.3303.2	chr14	-	8525	39	full-splice_match	CHD8	ENST00000643469.1	8259	39	33	-299	0	-1	multi-exon	FALSE	canonical	1	34274	junction_38	121249.29743402128	NA	0	NA	TRUE	NA	NA	NA	C	coding	2581	7746	363	8108	10.0	-1	True	AATAAA	-19
PB.3303.3	chr14	-	8466	38	full-splice_match	CHD8	ENST00000557364.6	8163	38	-5	-298	-5	-1	multi-exon	FALSE	canonical	1	33345	junction_37	113783.27102055613	NA	27	3	TRUE	NA	NA	NA	C	coding	2581	7746	304	8049	10.0	-7	True	AATAAA	-19
PB.3322.13	chr14	-	2373	12	full-splice_match	ACIN1	ENST00000397341.7	2738	12	378	-13	14	0	multi-exon	FALSE	canonical	1	183391	junction_11	419214.3094262199	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	41	1792	20.0	8991	False	AATAAA	-17
PB.3303.1	chr14	-	8471	38	full-splice_match	CHD8	ENST00000646647.1	8471	38	3	-3	3	0	multi-exon	FALSE	canonical	1	97548	junction_34	109597.15542319563	NA	0	NA	TRUE	NA	NA	NA	C	coding	2581	7746	308	8053	10.0	-12	True	AATAAA	-20
PB.3671.8	chr14	+	2423	4	novel_in_catalog	WDR20	novel	491	3	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	8763	junction_1	31962.280585437304	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	223	1782	40.0	-10	True	AATAAA	-12
PB.3671.9	chr14	+	2108	3	novel_in_catalog	WDR20	novel	491	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	7293	junction_2	58689.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	529	1467	40.0	-6	True	AATAAA	-12
PB.8846.3	chr4	-	3276	17	full-splice_match	ANTXR2	ENST00000404191.5	1469	17	-25	-1782	-25	0	multi-exon	FALSE	canonical	1	10917	junction_16	115789.61083913075	NA	2	NA	TRUE	NA	NA	NA	C	coding	411	1236	183	1418	15.0	6146	False	AATAAA	-14
PB.8846.2	chr4	-	3552	17	full-splice_match	ANTXR2	ENST00000403729.6	8273	17	299	4422	-87	0	multi-exon	FALSE	canonical	1	244193	junction_15	77904.91086371637	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	228	1694	15.0	2	True	AATAAA	-14
PB.8846.5	chr4	-	3799	16	full-splice_match	ANTXR2	ENST00000307333.7	1473	16	-678	-1648	-155	1606	multi-exon	FALSE	canonical	1	244193	junction_14	78140.22391100644	NA	2	NA	TRUE	NA	NA	NA	C	coding	489	1470	682	2151	80.0	-13	True	NA	NA
PB.8846.4	chr4	-	2851	18	novel_in_catalog	ANTXR2	novel	8273	17	NA	NA	153	-1	combination_of_known_junctions	FALSE	canonical	1	32249	junction_1	110294.46126559807	NA	9	NA	TRUE	NA	NA	NA	C	coding	488	1467	760	2226	10.0	6	True	AATAAA	-13
PB.8846.6	chr4	-	2077	3	incomplete-splice_match	ANTXR2	ENST00000346652.10	1343	12	-565	90823	-179	1076	3prime_fragment	FALSE	canonical	1	244193	junction_1	15180.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	706	1035	20.0	1	True	NA	NA
PB.3671.1	chr14	+	2597	4	novel_not_in_catalog	WDR20	novel	491	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	23	junction_2	58684.35139512634	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	766	1956	40.0	-21	True	AATAAA	-12
PB.3671.2	chr14	+	2565	4	full-splice_match	WDR20	ENST00000335263.9	2616	4	49	2	0	0	multi-exon	FALSE	canonical	1	23443	junction_3	41549.4260235793	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	32	1777	10.0	-21	True	ATTAAA	-14
PB.3671.3	chr14	+	2475	4	full-splice_match	WDR20	ENST00000454394.2	2067	4	-21	-387	0	0	multi-exon	FALSE	canonical	1	6745	junction_3	53095.03244393229	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	32	1834	40.0	-21	True	AATAAA	-12
PB.3671.4	chr14	+	2377	3	full-splice_match	WDR20	ENST00000342702.7	2391	3	5	9	1	0	multi-exon	FALSE	canonical	1	83182	junction_2	20744.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	27	1736	40.0	-16	True	AATAAA	-12
PB.3671.6	chr14	+	2194	2	novel_not_in_catalog	WDR20	novel	491	3	NA	NA	5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	coding	396	1191	363	1553	40.0	-12	True	AATAAA	-12
PB.3671.7	chr14	+	2715	1	novel_in_catalog	WDR20	novel	491	3	NA	NA	-7	-25048	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	120	363	21	383	60.0	-10	True	NA	NA
PB.4007.4	chr15	+	3893	11	full-splice_match	HMG20A	ENST00000381714.7	4112	11	216	3	-12	-3	multi-exon	FALSE	canonical	1	8205	junction_1	127584.94400081069	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	213	1256	25.0	2	True	ATTAAA	-14
PB.3752.1	chr15	+	2258	1	full-splice_match	PGBD4	ENST00000397766.3	6612	1	-25	4379	-25	-4379	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	585	1758	485	2242	25.0	-69	False	ATTAAA	-16
PB.4007.6	chr15	+	1320	9	incomplete-splice_match	HMG20A	ENST00000336216.8	4046	10	254	6120	3	-117	3prime_fragment	FALSE	canonical	1	264215	junction_6	40663.19348144431	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	105	1148	45.0	17	True	AGTAAA	-10
PB.11055.3	chr8	-	1506	8	novel_in_catalog	PBK	novel	2118	8	NA	NA	-8	-276	combination_of_known_junctions	FALSE	canonical	1	48157	junction_7	130255.51582774152	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	129	1097	15.0	-1	True	AATAAA	-24
PB.8467.7	chr3	+	4242	14	full-splice_match	EIF2A	ENST00000460851.5	2198	14	88	-2132	-4	2132	multi-exon	FALSE	canonical	1	735725	junction_6	295333.47177173395	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	22	1779	95.0	-5	True	NA	NA
PB.4007.1	chr15	+	3756	10	full-splice_match	HMG20A	ENST00000336216.8	4046	10	289	1	5	-1	multi-exon	FALSE	canonical	1	210513	junction_9	50228.18010088474	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	70	1113	20.0	-4	True	ATTAAA	-20
PB.4007.2	chr15	+	2460	9	incomplete-splice_match	HMG20A	ENST00000336216.8	4046	10	239	4995	-12	1008	3prime_fragment	FALSE	canonical	1	264215	junction_6	40663.19348144431	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	120	1163	90.0	2	True	NA	NA
PB.4007.3	chr15	+	1978	9	incomplete-splice_match	HMG20A	ENST00000336216.8	4046	10	236	5480	-15	523	3prime_fragment	FALSE	canonical	1	264215	junction_6	40663.19348144431	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	123	1166	70.0	-1	True	NA	NA
PB.9836.3	chr6	+	2018	7	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-21	-114	intron_retention	FALSE	canonical	1	5406965	junction_5	3168734.137829214	NA	8	NA	TRUE	NA	NA	NA	C	coding	215	648	28	675	35.0	-5	True	ATTAAA	-17
PB.9836.2	chr6	+	3094	8	novel_not_in_catalog	HLA-A	novel	1868	10	NA	NA	12	3726	any annotated donor/acceptor	FALSE	canonical	1	2926	junction_7	4218430.138653739	NA	3	NA	TRUE	NA	NA	NA	C	coding	366	1101	73	1173	25.0	-3249	False	NA	NA
PB.9836.1	chr6	+	1435	8	full-splice_match	HLA-A	ENST00000376809.9	1611	8	62	114	-16	-114	multi-exon	FALSE	canonical	1	5406965	junction_6	2947676.569232639	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	23	1120	35.0	0	True	ATTAAA	-17
PB.9836.7	chr6	+	2355	5	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-16	-115	intron_retention	FALSE	canonical	1	5406965	junction_3	1784322.389873324	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	1478	1801	35.0	0	True	ATTAAA	-16
PB.9836.6	chr6	+	2695	5	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-16	-115	intron_retention	FALSE	canonical	1	5406965	junction_3	3520275.4878138797	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	1478	1882	35.0	0	True	ATTAAA	-16
PB.9836.5	chr6	+	3097	2	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-16	-114	intron_retention	FALSE	canonical	1	5406965	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	1608	1931	35.0	0	True	ATTAAA	-17
PB.9836.4	chr6	+	2802	4	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-20	-114	intron_retention	FALSE	canonical	1	5406965	junction_2	1971536.134169214	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	1482	1805	35.0	-4	True	ATTAAA	-17
PB.9836.9	chr6	+	2277	8	full-splice_match	HLA-A	ENST00000376809.9	1611	8	62	-728	-16	728	multi-exon	FALSE	canonical	1	5406965	junction_6	2947676.569232639	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	23	1120	30.0	0	True	NA	NA
PB.9836.8	chr6	+	2253	6	novel_in_catalog	HLA-A	novel	1868	10	NA	NA	-16	-115	intron_retention	FALSE	canonical	1	5406965	junction_4	3365893.7954622987	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	1478	1939	35.0	0	True	ATTAAA	-16
PB.1791.1	chr11	-	4487	2	novel_not_in_catalog	RRP8	novel	6560	7	NA	NA	4	54208	intron_retention	FALSE	canonical	1	3371	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.1791.2	chr11	-	1753	7	full-splice_match	RRP8	ENST00000254605.10	6560	7	-37	4844	-37	1	multi-exon	FALSE	canonical	1	131627	junction_6	49839.32460667982	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	156	1526	20.0	8	True	NA	NA
PB.8978.1	chr4	+	2254	13	novel_not_in_catalog	ABHD18	novel	2177	11	NA	NA	-16	33	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	60235.32701338744	NA	1	1	TRUE	NA	NA	NA	C	coding	377	1134	615	1748	40.0	0	True	AATAAA	-15
PB.8467.4	chr3	+	2708	14	full-splice_match	EIF2A	ENST00000460851.5	2198	14	96	-606	0	606	multi-exon	FALSE	canonical	1	735725	junction_6	295333.47177173395	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	14	1771	65.0	3	True	TTTAAA	-8
PB.12091.16	chrX	-	5562	25	full-splice_match	SMC1A	ENST00000322213.8	9784	25	39	4183	-20	2288	multi-exon	FALSE	canonical	1	370159	junction_24	157711.304417803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	90	3791	20.0	-36	True	NA	NA
PB.2432.2	chr12	+	1311	7	full-splice_match	TPI1	ENST00000396705.9	1231	7	0	-80	0	-31	multi-exon	FALSE	canonical	1	363885	junction_4	1159246.3029641286	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	37	786	85.0	0	True	TATAAA	-14
PB.320.10	chr1	+	6231	8	full-splice_match	RLF	ENST00000372771.4	6246	8	14	1	14	-1	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	0	NA	TRUE	NA	NA	NA	C	coding	1914	5745	14	5758	25.0	0	True	AATAAA	-17
PB.2432.3	chr12	+	1235	7	full-splice_match	TPI1	ENST00000396705.9	1231	7	0	-4	0	4	multi-exon	FALSE	canonical	1	363885	junction_4	1159246.3029641286	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	37	786	5.0	0	True	AATAAA	-17
PB.8834.8	chr4	-	3323	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	316	1153	-1	173	multi-exon	FALSE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	60	1496	20.0	-2	True	AATAAA	-19
PB.8834.9	chr4	-	3194	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	295	1303	-20	23	multi-exon	FALSE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	81	1517	70.0	-1	True	NA	NA
PB.8467.5	chr3	+	2644	14	full-splice_match	EIF2A	ENST00000460851.5	2198	14	80	-526	7	526	multi-exon	FALSE	canonical	1	735725	junction_6	295333.47177173395	NA	1	NA	TRUE	NA	NA	NA	C	coding	585	1758	30	1787	10.0	-13	True	NA	NA
PB.11395.3	chr8	+	2279	7	novel_not_in_catalog	HGH1	novel	2531	6	NA	NA	-33	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	3811.6547004621957	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	101	1111	20.0	NA	False	ATTAAA	-17
PB.8834.1	chr4	-	4689	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	94	9	0	8	multi-exon	TRUE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	282	1718	40.0	-1	True	AATAAA	-14
PB.2438.12	chr12	+	2224	15	incomplete-splice_match	PTPN6	ENST00000399448.5	2159	16	4804	0	6	0	5prime_fragment	FALSE	canonical	1	860881	junction_10	328115.7444425702	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	563	2008	5.0	25	True	AATAAA	-18
PB.2438.13	chr12	+	2310	14	novel_in_catalog	PTPN6	novel	650	4	NA	NA	13	0	intron_retention	FALSE	canonical	1	860881	junction_10	340442.3155418072	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	556	1713	5.0	32	True	AATAAA	-18
PB.2438.10	chr12	+	2207	16	novel_in_catalog	PTPN6	novel	650	4	NA	NA	4	1	intron_retention	FALSE	canonical	1	17271	junction_2	480569.52226380544	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	548	1993	5.0	23	True	AATAAA	-16
PB.2438.11	chr12	+	2491	14	novel_in_catalog	PTPN6	novel	650	4	NA	NA	6	0	intron_retention	FALSE	canonical	1	571223	junction_1	377333.7932697799	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	420	2123	5.0	25	True	AATAAA	-18
PB.2438.15	chr12	+	2115	14	novel_not_in_catalog	PTPN6	novel	656	5	NA	NA	2830	0	intron_retention	FALSE	canonical	1	6000	junction_1	472685.7803823473	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	373	1899	5.0	-2	True	AATAAA	-18
PB.6448.1	chr2	+	4863	16	full-splice_match	EPAS1	ENST00000263734.4	5166	16	-83	386	-83	-379	multi-exon	FALSE	canonical	1	519898	junction_1	150198.66925352198	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	594	3206	60.0	-464	False	NA	NA
PB.2146.1	chr11	-	1948	7	full-splice_match	STARD10	ENST00000334805.10	1963	7	15	0	-9	0	multi-exon	FALSE	canonical	1	37853	junction_6	384845.3574825723	NA	0	NA	TRUE	NA	NA	NA	A	coding	291	876	906	1781	15.0	-10	True	AATAAA	-16
PB.3149.18	chr13	-	3292	15	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-7467	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	148470.00312309706	NA	0	NA	TRUE	NA	NA	NA	B	coding	967	2901	392	3292	65.0	-1	True	NA	NA
PB.3149.19	chr13	-	2951	14	incomplete-splice_match	ZC3H13	ENST00000282007.7	6412	17	21	7467	8	-7467	3prime_fragment	FALSE	canonical	1	43285	junction_13	115968.72213304586	NA	0	NA	TRUE	NA	NA	NA	B	coding	967	2901	51	2951	65.0	-11	True	NA	NA
PB.3149.14	chr13	-	3232	14	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-7470	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_13	111530.19961804175	NA	0	NA	TRUE	NA	NA	NA	B	coding	966	2898	335	3232	65.0	-1	True	NA	NA
PB.3149.16	chr13	-	3301	15	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-7485	any annotated donor/acceptor	FALSE	canonical	1	33417	junction_3	156896.66116483635	NA	2	1	TRUE	NA	NA	NA	B	coding	989	2967	335	3301	60.0	-1	True	NA	NA
PB.3149.17	chr13	-	3133	15	novel_not_in_catalog	ZC3H13	novel	8018	19	NA	NA	0	-7387	any annotated donor/acceptor	FALSE	canonical	1	18436	junction_14	162512.33787221782	NA	1	NA	TRUE	NA	NA	NA	B	coding	1021	3063	69	3131	75.0	-32	True	NA	NA
PB.8372.9	chr3	-	2285	9	novel_in_catalog	TPRA1	novel	4235	13	NA	NA	0	-4	intron_retention	FALSE	canonical	1	125486	junction_8	134617.0498812627	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	343	993	30.0	-2	True	AATAAA	-14
PB.3149.11	chr13	-	1808	4	incomplete-splice_match	ZC3H13	ENST00000282007.7	6412	17	77251	5599	36047	-5599	internal_fragment	FALSE	canonical	1	444066	junction_3	37855.559876398016	NA	0	NA	TRUE	NA	NA	NA	B	coding	419	1257	552	1808	45.0	9970	False	NA	NA
PB.3149.12	chr13	-	3103	14	incomplete-splice_match	ZC3H13	ENST00000282007.7	6412	17	-22	7358	-22	-7358	3prime_fragment	FALSE	canonical	1	43285	junction_13	115968.72213304586	NA	2	NA	TRUE	NA	NA	NA	B	coding	1003	3009	94	3102	70.0	5590	False	AAAAAG	-22
PB.3149.13	chr13	-	2390	7	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	19	-7358	no_combination_of_known_junctions	FALSE	canonical	1	481	junction_6	171195.36777100601	NA	14	2	TRUE	NA	NA	NA	B	coding	609	1827	563	2389	70.0	0	True	AAAAAG	-22
PB.2047.1	chr11	-	1621	2	full-splice_match	AP003068.2	ENST00000526623.2	1662	2	185	-144	185	144	multi-exon	FALSE	canonical	1	41457	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	91	276	455	730	25.0	-69	False	NA	NA
PB.1005.9	chr1	+	3813	2	full-splice_match	RGS1	ENST00000462589.1	639	2	1	-3175	1	0	multi-exon	FALSE	canonical	1	840369	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-31
PB.1005.8	chr1	+	1758	4	novel_in_catalog	RGS1	novel	1405	5	NA	NA	0	-9	intron_retention	FALSE	canonical	1	582512	junction_2	222481.09380699194	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	621	1058	25.0	-2	True	AATAAA	-15
PB.1005.5	chr1	+	3498	2	novel_in_catalog	RGS1	novel	1405	5	NA	NA	0	-10	intron_retention	FALSE	canonical	1	1127220	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-14
PB.1005.4	chr1	+	3841	2	full-splice_match	RGS1	ENST00000583155.1	644	2	1	-3198	1	-9	multi-exon	FALSE	canonical	1	897826	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-15
PB.1005.7	chr1	+	2655	4	full-splice_match	RGS1	ENST00000498352.1	2653	4	-2	0	0	0	multi-exon	FALSE	canonical	1	840369	junction_1	123920.40917280558	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	21	317	20.0	-2	True	AATAAA	-31
PB.1005.6	chr1	+	3008	3	novel_in_catalog	RGS1	novel	1405	5	NA	NA	1	-1	intron_retention	FALSE	canonical	1	897826	junction_1	114697.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-30
PB.1005.1	chr1	+	3063	3	novel_in_catalog	RGS1	novel	1405	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	840369	junction_1	143425.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-31
PB.1005.3	chr1	+	3343	1	novel_in_catalog	RGS1	novel	1405	5	NA	NA	905	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2750	False	AATAAA	-15
PB.1005.2	chr1	+	1267	5	full-splice_match	RGS1	ENST00000367459.7	1405	5	47	91	1	-1	multi-exon	FALSE	canonical	1	582512	junction_3	193782.4757613224	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	20	649	20.0	-1	True	AATAAA	-30
PB.6924.9	chr2	+	2597	7	full-splice_match	MOB4	ENST00000448447.6	1021	7	20	-1596	-7	-1091	multi-exon	FALSE	canonical	1	122184	junction_1	121255.54965398033	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	21	635	55.0	1	True	CATAAA	-9
PB.2633.3	chr12	-	1713	16	novel_not_in_catalog	AAAS	novel	1840	16	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	3527	junction_15	214513.70613536303	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	993	1682	15.0	-22	True	AATAAA	-25
PB.2633.2	chr12	-	1823	16	full-splice_match	AAAS	ENST00000209873.8	1840	16	16	1	1	0	multi-exon	FALSE	canonical	1	375862	junction_15	157328.73165098188	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	151	1791	15.0	-22	True	AATAAA	-26
PB.2633.4	chr12	-	1848	16	novel_not_in_catalog	AAAS	novel	1840	16	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	7040	junction_2	218511.1804510393	NA	2	1	TRUE	NA	NA	NA	C	coding	560	1683	137	1819	15.0	-8	True	AATAAA	-23
PB.8302.8	chr3	-	2351	9	novel_not_in_catalog	NEPRO	novel	4992	9	NA	NA	-8	-4	any annotated donor/acceptor	FALSE	canonical	1	9046	junction_1	103060.21867691906	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	98	1378	35.0	-21	False	ATTAAA	-19
PB.11298.8	chr8	+	5468	8	full-splice_match	EMC2	ENST00000517784.5	640	8	1	-4829	1	4829	multi-exon	FALSE	canonical	1	2171	junction_7	226333.60521142237	NA	6	NA	TRUE	NA	NA	NA	C	coding	212	639	22	660	35.0	1	True	AATAAA	-39
PB.5072.2	chr17	-	1701	5	full-splice_match	MRPL10	ENST00000421763.5	1576	5	4	-129	-1	7	multi-exon	FALSE	canonical	1	15416	junction_4	282787.0886147165	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	282	950	15.0	-4	True	AATAAA	-22
PB.5072.1	chr17	-	1569	5	full-splice_match	MRPL10	ENST00000351111.6	1725	5	-24	180	-7	9	multi-exon	FALSE	canonical	1	211008	junction_4	224099.60368146014	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	31	816	15.0	-19	True	AATAAA	-24
PB.11754.14	chr9	-	1888	8	full-splice_match	FBXW2	ENST00000608872.5	9138	8	0	7250	0	7187	multi-exon	FALSE	canonical	1	93453	junction_7	132079.66354949176	NA	1	NA	TRUE	NA	NA	NA	C	coding	454	1365	189	1553	30.0	-9	True	AGTAAA	-27
PB.55.1	chr1	-	4034	13	novel_not_in_catalog	NOL9	novel	6649	12	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	73856.00851036653	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	35	2143	30.0	-24	True	ATTAAA	-17
PB.8544.15	chr3	+	7347	30	novel_not_in_catalog	ATP11B	novel	7325	30	NA	NA	5	-9	any annotated donor/acceptor	FALSE	canonical	1	340	junction_29	83280.38965918668	NA	11	NA	TRUE	NA	NA	NA	C	coding	1153	3462	253	3714	35.0	4	True	AATAAA	-13
PB.1941.1	chr11	+	1685	6	incomplete-splice_match	TRIM51	ENST00000449290.6	1629	7	1980	4	-643	-4	5prime_fragment	FALSE	canonical	1	1746	junction_1	614.0267095167766	NA	0	NA	TRUE	NA	NA	NA	A	coding	462	1389	123	1511	35.0	NA	False	ATTAAA	-16
PB.3383.6	chr14	+	1838	16	full-splice_match	SRP54	ENST00000216774.10	2279	16	76	365	1	65	multi-exon	FALSE	canonical	1	479853	junction_1	198892.00132489548	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	276	1790	15.0	-45	True	TATAAA	-29
PB.3383.7	chr14	+	2023	15	novel_in_catalog	SRP54	novel	2327	17	NA	NA	9	-1	intron_retention	FALSE	canonical	1	18776	junction_13	276195.7029228754	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	268	1611	20.0	-37	True	AATAAA	-20
PB.3383.4	chr14	+	2112	15	full-splice_match	SRP54	ENST00000546080.5	2187	15	75	0	0	0	multi-exon	FALSE	canonical	1	4403	junction_2	278741.2545089614	NA	5	NA	TRUE	NA	NA	NA	C	coding	455	1368	332	1699	20.0	-46	True	AATAAA	-21
PB.3383.5	chr14	+	1904	16	full-splice_match	SRP54	ENST00000216774.10	2279	16	180	195	-27	-84	multi-exon	FALSE	canonical	1	479853	junction_1	198892.00132489548	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	172	1686	20.0	5	True	AATATA	-33
PB.3383.2	chr14	+	2283	16	novel_in_catalog	SRP54	novel	2327	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4145	junction_1	268621.87116346275	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	356	1870	20.0	0	True	AATAAA	-21
PB.3383.3	chr14	+	1859	15	novel_in_catalog	SRP54	novel	2327	17	NA	NA	-20	-83	intron_retention	FALSE	canonical	1	18776	junction_13	276195.7029228754	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	297	1640	20.0	0	True	AATATA	-34
PB.8083.2	chr3	-	5934	19	full-splice_match	MAP4	ENST00000360240.10	5142	19	384	-1176	-47	-2	multi-exon	FALSE	canonical	1	635585	junction_18	261639.99975374347	NA	0	NA	TRUE	NA	NA	NA	C	coding	1152	3459	136	3594	5.0	-41	True	AATAAA	-27
PB.3383.1	chr14	+	2073	16	full-splice_match	SRP54	ENST00000216774.10	2279	16	202	4	-5	-4	multi-exon	FALSE	canonical	1	479853	junction_1	198892.00132489548	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	150	1664	25.0	-5	True	AATAAA	-17
PB.11280.16	chr8	-	3234	9	full-splice_match	RRM2B	ENST00000251810.7	4931	9	180	1517	1	-394	multi-exon	FALSE	canonical	1	165153	junction_8	46010.58837648134	NA	5	1	TRUE	NA	NA	NA	C	coding	351	1056	65	1120	65.0	-2	True	TTTAAA	-31
PB.11754.10	chr9	-	4082	6	novel_in_catalog	FBXW2	novel	2154	4	NA	NA	32	-7199	intron_retention	FALSE	canonical	1	146018	junction_5	114839.52592622455	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	208	942	15.0	68	False	ATTAAA	-13
PB.11280.14	chr8	-	3664	9	full-splice_match	RRM2B	ENST00000522368.5	1613	9	-28	-2023	-6	-97	multi-exon	FALSE	canonical	1	28851	junction_8	84887.96741551478	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	360	1253	70.0	-7	True	TTTAAA	-15
PB.8004.8	chr3	-	3655	16	novel_in_catalog	UBP1	novel	4148	16	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	3579	junction_15	180204.9854132664	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	149	1663	35.0	-27	True	AATAAA	-20
PB.11280.12	chr8	-	3797	9	full-splice_match	RRM2B	ENST00000522368.5	1613	9	-59	-2125	-37	5	multi-exon	FALSE	canonical	1	28851	junction_8	84887.96741551478	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	13	1284	40.0	952	False	AATAAA	-21
PB.8083.9	chr3	-	4799	17	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-77	319	combination_of_known_junctions	FALSE	canonical	1	180708	junction_4	395187.4973781779	NA	1	1	TRUE	NA	NA	NA	C	coding	1082	3249	166	3414	25.0	353	False	AATAAA	-24
PB.11280.10	chr8	-	4692	9	full-splice_match	RRM2B	ENST00000251810.7	4931	9	63	176	63	-176	multi-exon	FALSE	canonical	1	165153	junction_8	46010.58837648134	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	182	1237	35.0	1	True	AATACA	-18
PB.8544.11	chr3	+	11345	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	1	7	1	-7	intron_retention	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	1	NA	TRUE	NA	NA	NA	C	coding	1162	3489	260	3748	30.0	-3	True	AATAAA	-15
PB.9924.40	chr6	-	3939	3	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-23	-3639	intron_retention	TRUE	non_canonical	0	0	junction_1	420948.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	32	349	80.0	-4	True	NA	NA
PB.9428.1	chr5	+	1940	5	full-splice_match	ISOC1	ENST00000173527.5	1940	5	-1	1	-1	-1	multi-exon	FALSE	canonical	1	280876	junction_1	44641.761555185076	NA	0	NA	TRUE	NA	NA	NA	A	coding	298	897	18	914	35.0	-1	True	ATTAAA	-14
PB.4019.1	chr15	-	2994	14	novel_not_in_catalog	RASGRF1	novel	6237	27	NA	NA	1157	-961	any annotated donor/acceptor	FALSE	canonical	1	2160	junction_13	29225.11217162026	NA	2	NA	TRUE	NA	NA	NA	B	coding	489	1470	289	1758	25.0	43	False	AATAAA	-20
PB.11754.12	chr9	-	2210	8	novel_not_in_catalog	FBXW2	novel	2154	4	NA	NA	-15	-7199	any annotated donor/acceptor	FALSE	canonical	1	9103	junction_6	166907.6794530682	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	364	1824	15.0	-24	True	ATTAAA	-13
PB.4019.2	chr15	-	1526	3	novel_not_in_catalog	RASGRF1	novel	6237	27	NA	NA	1131	-9009	any annotated donor/acceptor	FALSE	canonical	1	2160	junction_2	39796.5	NA	1	1	TRUE	NA	NA	NA	B	coding	124	375	315	689	30.0	17	True	AATAAA	-18
PB.3238.7	chr13	+	3222	5	incomplete-splice_match	TM9SF2	ENST00000376387.4	3430	17	31	24797	31	1347	intron_retention	FALSE	canonical	1	917920	junction_1	147403.59841265748	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	160	762	95.0	7	True	NA	NA
PB.3238.6	chr13	+	2686	16	novel_in_catalog	TM9SF2	novel	1277	5	NA	NA	9	57	no_combination_of_known_junctions	FALSE	canonical	1	4023	junction_10	463496.57733212615	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	182	2053	25.0	7	True	AATAAA	-16
PB.3238.1	chr13	+	4125	19	full-splice_match	TM9SF2	ENST00000642475.1	3858	19	-219	-48	213	48	multi-exon	TRUE	canonical	1	7253	junction_1	537342.0334570488	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	1510	3501	35.0	-2802	False	AATAAA	-7
PB.3238.2	chr13	+	3540	19	novel_in_catalog	TM9SF2	novel	1277	5	NA	NA	-213	57	no_combination_of_known_junctions	FALSE	canonical	1	2157	junction_1	538024.4510502327	NA	2	NA	TRUE	NA	NA	NA	C	coding	663	1992	916	2907	25.0	-2796	False	AATAAA	-16
PB.9187.2	chr5	+	2128	18	full-splice_match	WDR70	ENST00000265107.8	2983	18	90	765	0	0	multi-exon	FALSE	canonical	1	74956	junction_12	73637.66594100301	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	67	2031	20.0	-26	False	ATTAAA	-15
PB.5660.3	chr19	+	4018	8	full-splice_match	ZNF557	ENST00000414706.2	5736	8	-20	1738	-20	-1738	multi-exon	FALSE	canonical	1	25356	junction_3	18645.59303296681	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	261	1532	80.0	-23	True	NA	NA
PB.9187.1	chr5	+	2669	10	incomplete-splice_match	WDR70	ENST00000504564.1	1526	12	8	91167	5	-91167	3prime_fragment	FALSE	canonical	1	196204	junction_5	56187.34114252663	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	76	1176	25.0	5	True	AATAAA	-24
PB.1565.8	chr10	-	4171	15	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	6169	junction_3	127373.46614245392	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	181	1908	20.0	7694	False	NA	NA
PB.1565.6	chr10	-	4785	17	full-splice_match	PIK3AP1	ENST00000339364.9	4803	17	-20	38	-20	-38	multi-exon	FALSE	canonical	1	67077	junction_16	104349.95120025736	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	141	2558	65.0	96	False	NA	NA
PB.1565.7	chr10	-	4395	16	novel_not_in_catalog	PIK3AP1	novel	4803	17	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	1445	junction_2	126910.21766314431	NA	3	1	TRUE	NA	NA	NA	C	coding	593	1782	179	1960	20.0	7696	False	NA	NA
PB.1565.4	chr10	-	4491	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	1	163	combination_of_known_junctions	FALSE	canonical	1	45893	junction_15	103313.0706431024	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	180	2063	35.0	7695	False	NA	NA
PB.1565.5	chr10	-	4319	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	-20	-30	combination_of_known_junctions	FALSE	canonical	1	45893	junction_15	103313.0706431024	NA	3	NA	TRUE	NA	NA	NA	C	coding	627	1884	201	2084	60.0	0	True	NA	NA
PB.1565.2	chr10	-	5086	17	full-splice_match	PIK3AP1	ENST00000339364.9	4803	17	-13	-270	-13	270	multi-exon	FALSE	canonical	1	67077	junction_16	104349.95120025736	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	134	2551	30.0	-14	True	NA	NA
PB.1565.3	chr10	-	4572	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	26	269	combination_of_known_junctions	FALSE	canonical	1	45893	junction_15	103313.0706431024	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	155	2038	35.0	-10	True	NA	NA
PB.1565.1	chr10	-	5692	16	novel_in_catalog	PIK3AP1	novel	4803	17	NA	NA	5	1368	combination_of_known_junctions	TRUE	canonical	1	45893	junction_15	103313.0706431024	NA	3	1	TRUE	NA	NA	NA	C	coding	627	1884	176	2059	20.0	7699	False	TATAAA	-18
PB.1019.6	chr1	-	4858	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-749	1025	any annotated donor/acceptor	FALSE	canonical	1	55417	junction_10	7391.040160221022	NA	1	NA	TRUE	NA	NA	NA	B	coding	909	2730	187	2916	70.0	-5	True	CATAAA	-38
PB.1019.7	chr1	-	4417	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-766	567	any annotated donor/acceptor	FALSE	canonical	1	55417	junction_10	7391.040160221022	NA	1	NA	TRUE	NA	NA	NA	B	coding	909	2730	204	2933	80.0	-22	True	NA	NA
PB.1019.5	chr1	-	6059	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-749	2226	any annotated donor/acceptor	FALSE	canonical	1	55417	junction_10	7391.040160221022	NA	2	NA	TRUE	NA	NA	NA	B	coding	909	2730	187	2916	60.0	-5	True	NA	NA
PB.6526.1	chr2	-	5406	17	novel_in_catalog	AAK1	novel	8964	5	NA	NA	-39	2015	combination_of_known_junctions	FALSE	canonical	1	72520	junction_4	59673.70123207019	NA	2	NA	TRUE	NA	NA	NA	B	coding	1131	3396	417	3812	85.0	197	False	NA	NA
PB.5437.8	chr18	-	4410	8	novel_not_in_catalog	B4GALT6	novel	4427	5	NA	NA	72	-4	any annotated donor/acceptor	FALSE	canonical	1	566	junction_7	46935.14194359389	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	121	1047	35.0	NA	False	AATATA	-8
PB.449.2	chr1	+	1969	15	full-splice_match	ALG6	ENST00000263440.5	1973	15	1	3	1	-3	multi-exon	FALSE	non_canonical	0	0	junction_7	50958.912151189536	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	268	1791	35.0	1	True	AATAAA	-15
PB.5437.9	chr18	-	4408	7	novel_in_catalog	B4GALT6	novel	4427	5	NA	NA	18	-4	no_combination_of_known_junctions	FALSE	canonical	1	2167	junction_6	50063.99870082959	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	128	1045	35.0	27	True	AATATA	-8
PB.1019.8	chr1	-	2301	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-743	-1526	any annotated donor/acceptor	FALSE	canonical	1	55417	junction_10	7391.040160221022	NA	0	NA	TRUE	NA	NA	NA	B	coding	707	2121	181	2301	70.0	1	True	NA	NA
PB.1019.9	chr1	-	2585	11	novel_not_in_catalog	ZBTB41	novel	8478	10	NA	NA	-752	-9154	any annotated donor/acceptor	TRUE	canonical	1	2266	junction_1	21912.06217246565	NA	1	NA	TRUE	NA	NA	NA	B	coding	734	2205	190	2394	35.0	-8	True	NA	NA
PB.11237.2	chr8	+	3333	28	full-splice_match	TMEM67	ENST00000453321.7	4651	28	21	1297	-9	0	multi-exon	FALSE	canonical	1	40260	junction_6	10562.076234792796	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	68	3025	20.0	-25	False	ATTAAA	-13
PB.11237.3	chr8	+	4235	28	full-splice_match	TMEM67	ENST00000453321.7	4651	28	24	392	-6	-391	multi-exon	FALSE	canonical	1	40260	junction_6	10562.076234792796	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	65	3022	10.0	-22	False	AATATA	-16
PB.11237.1	chr8	+	3495	28	full-splice_match	TMEM67	ENST00000453321.7	4651	28	21	1135	-9	162	multi-exon	FALSE	canonical	1	40260	junction_6	10562.076234792796	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	68	3025	45.0	-25	False	AATAAA	-28
PB.6146.2	chr19	+	3313	18	incomplete-splice_match	AP2A1	ENST00000354293.9	3388	23	44	2889	5	-317	3prime_fragment	FALSE	canonical	1	543141	junction_15	186017.3176280168	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2469	123	2591	85.0	0	True	NA	NA
PB.11237.7	chr8	+	2720	13	full-splice_match	TMEM67	ENST00000519845.5	1964	13	213	-969	213	-391	multi-exon	FALSE	canonical	1	2131	junction_1	19287.236301214565	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	323	1507	10.0	205	False	AATATA	-16
PB.11237.4	chr8	+	4617	28	full-splice_match	TMEM67	ENST00000453321.7	4651	28	38	-4	0	4	multi-exon	FALSE	canonical	1	40260	junction_6	10562.076234792796	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	51	3008	30.0	-8	True	ATTAAA	-25
PB.6146.1	chr19	+	3349	23	novel_not_in_catalog	AP2A1	novel	3388	23	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_18	270414.39931549336	NA	0	NA	TRUE	NA	NA	NA	B	coding	955	2868	127	2994	15.0	-4	True	AATAAA	-16
PB.11237.8	chr8	+	2411	13	full-splice_match	TMEM67	ENST00000519845.5	1964	13	224	-671	224	607	multi-exon	FALSE	canonical	1	2131	junction_1	19287.236301214565	NA	14	1	TRUE	NA	NA	NA	C	coding	394	1185	312	1496	65.0	216	False	NA	NA
PB.11237.9	chr8	+	1965	13	full-splice_match	TMEM67	ENST00000519845.5	1964	13	227	-228	227	164	multi-exon	FALSE	canonical	1	2131	junction_1	19287.236301214565	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	309	1493	40.0	219	False	AATAAA	-30
PB.305.2	chr1	+	2034	8	full-splice_match	UTP11	ENST00000373014.4	2019	8	-16	1	-8	-1	multi-exon	FALSE	canonical	1	649021	junction_1	142937.22689220138	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	78	839	20.0	-8	True	AGTAAA	-31
PB.7032.1	chr2	-	3468	9	full-splice_match	OBSL1	ENST00000373873.8	3297	9	-164	-7	11	7	multi-exon	FALSE	canonical	1	286539	junction_8	123358.01212470706	NA	0	NA	TRUE	NA	NA	NA	A	coding	1025	3078	222	3299	25.0	-38	True	NA	NA
PB.3404.21	chr14	+	3568	14	novel_in_catalog	PRPF39	novel	2868	14	NA	NA	-4	0	intron_retention	FALSE	canonical	1	74471	junction_3	103505.73046257737	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	2064	2885	35.0	6	True	AATAAA	-16
PB.3404.20	chr14	+	2846	14	full-splice_match	PRPF39	ENST00000355765.10	2868	14	20	2	1	-2	multi-exon	FALSE	canonical	1	74825	junction_3	95431.2032678407	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	151	2160	30.0	1	True	AATAAA	-19
PB.11999.1	chrX	+	2760	6	novel_not_in_catalog	MBTPS2	novel	1862	6	NA	NA	-39	841	any annotated donor/acceptor	FALSE	canonical	1	4071	junction_5	64887.93543332998	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	139	1929	60.0	-57	False	AATAAA	-12
PB.11999.3	chrX	+	5268	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-25	-815	-25	815	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	125	1684	35.0	-18	True	AATATA	-14
PB.11999.2	chrX	+	2742	6	full-splice_match	MBTPS2	ENST00000465888.1	1862	6	-31	-849	-31	849	multi-exon	FALSE	canonical	1	3425	junction_5	65132.39409203381	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	131	1903	45.0	-24	True	AATAAA	-20
PB.11999.5	chrX	+	4150	9	novel_in_catalog	MBTPS2	novel	1862	6	NA	NA	-24	-2	no_combination_of_known_junctions	FALSE	canonical	1	4511	junction_5	52435.546856206	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	124	1383	15.0	-17	True	AATAAA	-31
PB.11999.4	chrX	+	2296	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-25	2157	-25	-2157	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	125	1684	30.0	-18	True	AATAAA	-14
PB.11999.7	chrX	+	3181	6	full-splice_match	MBTPS2	ENST00000465888.1	1862	6	-24	-1295	-24	1295	multi-exon	FALSE	canonical	1	3425	junction_5	65132.39409203381	NA	2	NA	TRUE	NA	NA	NA	C	coding	590	1773	124	1896	95.0	-17	True	NA	NA
PB.11999.6	chrX	+	4079	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-24	373	-24	-373	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	124	1683	25.0	-17	True	AGTAAA	-27
PB.11999.9	chrX	+	3855	7	novel_in_catalog	MBTPS2	novel	1862	6	NA	NA	-20	-2	no_combination_of_known_junctions	FALSE	canonical	1	128	junction_5	61051.61527051425	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	120	1088	15.0	-13	True	AATAAA	-31
PB.11999.8	chrX	+	3917	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-21	532	-21	-532	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	121	1680	15.0	-14	True	CATAAA	-19
PB.8102.4	chr3	-	1848	11	novel_in_catalog	DALRD3	novel	685	2	NA	NA	-7	0	intron_retention	FALSE	canonical	1	105875	junction_10	99597.66695982391	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	20	1696	20.0	-4	True	AATAAA	-18
PB.3202.7	chr13	-	2823	17	incomplete-splice_match	MYCBP2	ENST00000544440.6	14664	83	249484	261	10319	-14	5prime_fragment	FALSE	canonical	1	140570	junction_15	105933.51496214206	NA	0	NA	TRUE	NA	NA	NA	B	coding	727	2184	178	2361	75.0	NA	False	GATAAA	-39
PB.3202.4	chr13	-	3275	17	incomplete-splice_match	MYCBP2	ENST00000544440.6	14664	83	249289	4	10124	-1	5prime_fragment	FALSE	canonical	1	140570	junction_15	105933.51496214206	NA	1	NA	TRUE	NA	NA	NA	B	coding	727	2184	373	2556	20.0	NA	False	AATAAA	-33
PB.9134.7	chr5	-	3649	18	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-16	-6	intron_retention	FALSE	canonical	1	362924	junction_16	142113.7548023197	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	80	1849	45.0	-15	True	AATAAA	-7
PB.3202.3	chr13	-	3463	19	incomplete-splice_match	MYCBP2	ENST00000429715.1	3660	22	5954	-243	5954	-1	5prime_fragment	FALSE	canonical	1	138987	junction_15	103233.102329535	NA	2	NA	TRUE	NA	NA	NA	B	coding	864	2595	150	2744	20.0	NA	False	AATAAA	-33
PB.8102.2	chr3	-	1782	11	novel_in_catalog	DALRD3	novel	685	2	NA	NA	19	1	intron_retention	FALSE	canonical	1	105875	junction_10	99327.55722965304	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	483	1433	15.0	2959	False	AATAAA	-19
PB.8102.3	chr3	-	1749	12	full-splice_match	DALRD3	ENST00000341949.8	1739	12	-12	2	-7	1	multi-exon	FALSE	canonical	1	105875	junction_11	95786.06372666085	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	20	1651	15.0	-4	True	AATAAA	-19
PB.8947.1	chr4	+	3135	6	incomplete-splice_match	ANK2	ENST00000612754.1	6134	11	9438	-7	7566	1	5prime_fragment	FALSE	canonical	1	211825	junction_5	36488.582501379795	NA	1	NA	TRUE	NA	NA	NA	B	coding	201	606	265	870	15.0	-1261	False	AATAAA	-21
PB.4508.4	chr16	+	2284	18	novel_in_catalog	PRMT7	novel	584	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	80400	junction_1	83505.40502192317	NA	0	NA	TRUE	NA	NA	NA	B	coding	692	2079	165	2243	15.0	-35	True	AATAAA	-24
PB.4508.5	chr16	+	2398	19	novel_in_catalog	PRMT7	novel	584	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	97405	junction_1	87944.62872390675	NA	0	NA	TRUE	NA	NA	NA	B	coding	692	2079	279	2357	15.0	-14	True	AATAAA	-24
PB.4508.2	chr16	+	3286	19	novel_in_catalog	PRMT7	novel	584	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	29507	junction_14	102873.37559943399	NA	1	NA	TRUE	NA	NA	NA	B	coding	502	1509	309	1817	15.0	-44	True	AATAAA	-24
PB.4508.3	chr16	+	2198	16	novel_in_catalog	PRMT7	novel	584	5	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	1	41452	junction_11	109282.08628771486	NA	1	NA	TRUE	NA	NA	NA	B	coding	618	1857	304	2160	10.0	-39	True	AATAAA	-21
PB.4508.1	chr16	+	2257	17	novel_in_catalog	PRMT7	novel	584	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	34637	junction_2	104180.55208147057	NA	2	NA	TRUE	NA	NA	NA	B	coding	612	1839	378	2216	15.0	-45	True	AATAAA	-24
PB.6355.12	chr2	-	3048	23	full-splice_match	DNMT3A	ENST00000321117.9	4279	23	-35	1266	-35	-45	multi-exon	FALSE	canonical	1	38531	junction_22	71611.05231782392	NA	1	NA	TRUE	NA	NA	NA	C	coding	912	2739	273	3011	80.0	4	True	NA	NA
PB.6355.13	chr2	-	2335	18	full-splice_match	DNMT3A	ENST00000402667.1	2300	18	-80	45	-80	-45	multi-exon	FALSE	canonical	1	39538	junction_17	54149.4838349517	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	31	2298	80.0	806	False	NA	NA
PB.6355.10	chr2	-	3856	23	full-splice_match	DNMT3A	ENST00000321117.9	4279	23	-36	459	-36	-458	multi-exon	FALSE	canonical	1	38531	junction_22	71611.05231782392	NA	2	NA	TRUE	NA	NA	NA	C	coding	912	2739	274	3012	35.0	3	True	NA	NA
PB.6355.11	chr2	-	3144	18	full-splice_match	DNMT3A	ENST00000402667.1	2300	18	-83	-761	-83	-459	multi-exon	FALSE	canonical	1	39538	junction_17	54149.4838349517	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	34	2301	35.0	803	False	NA	NA
PB.6355.14	chr2	-	1677	4	full-splice_match	DNMT3A	ENST00000406659.3	1775	4	93	5	-8	-5	multi-exon	FALSE	canonical	1	12489	junction_3	40238.50199608441	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	246	746	35.0	-15	True	NA	NA
PB.6355.15	chr2	-	3040	3	incomplete-splice_match	DNMT3A	ENST00000321117.9	4279	23	-16	64553	-16	-16077	3prime_fragment	FALSE	canonical	1	38531	junction_2	24007.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	128	387	254	640	100.0	23	True	NA	NA
PB.5706.4	chr19	+	1921	10	novel_not_in_catalog	ATG4D	novel	1752	10	NA	NA	10	-1	any annotated donor/acceptor	FALSE	canonical	1	2530	junction_4	157941.25364901414	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	187	1110	5.0	1	True	AATAAA	-14
PB.6627.1	chr2	+	1803	6	novel_in_catalog	FAHD2CP	novel	965	4	NA	NA	7	3	intron_retention	FALSE	canonical	1	7264	junction_1	42385.20887479499	NA	0	NA	TRUE	NA	NA	NA	A	coding	121	366	736	1101	15.0	0	True	AGTAAA	-22
PB.5706.1	chr19	+	1965	10	full-splice_match	ATG4D	ENST00000309469.8	1949	10	-15	-1	8	1	multi-exon	FALSE	canonical	1	151459	junction_4	133566.22974473087	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	189	1613	5.0	-1	True	AATAAA	-16
PB.5706.3	chr19	+	2035	10	full-splice_match	ATG4D	ENST00000586417.5	1752	10	10	-293	10	-1	multi-exon	FALSE	canonical	1	44116	junction_1	151658.42745980274	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	711	1685	5.0	1	True	AATAAA	-14
PB.5706.2	chr19	+	2031	9	novel_in_catalog	ATG4D	novel	1752	10	NA	NA	9	-1	intron_retention	FALSE	canonical	1	151459	junction_4	125195.48090086957	NA	2	1	TRUE	NA	NA	NA	C	coding	497	1494	188	1681	5.0	0	True	AATAAA	-14
PB.11227.1	chr8	+	2892	1	novel_in_catalog	DECR1	novel	816	8	NA	NA	-3	-1887	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-22	True	NA	NA
PB.1253.2	chr1	+	3029	4	novel_not_in_catalog	OR2T2	novel	3331	3	NA	NA	-3493	109606	intron_retention	FALSE	canonical	1	15	junction_3	4.9216076867444665	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	55	False	ATTAAA	-19
PB.11227.2	chr8	+	1125	10	full-splice_match	DECR1	ENST00000220764.6	1207	10	70	12	-1	-3	multi-exon	FALSE	canonical	1	688880	junction_1	232039.54368364366	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	19	1026	50.0	-2	True	NA	NA
PB.11147.2	chr8	-	3937	30	novel_in_catalog	NSMAF	novel	3569	31	NA	NA	11	-7	intron_retention	FALSE	canonical	1	159507	junction_29	66523.14556703685	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	203	1687	35.0	-5	True	ATTAAA	-14
PB.11740.4	chr9	-	2224	5	full-splice_match	POLE3	ENST00000374171.4	2191	5	-39	6	-39	-6	multi-exon	FALSE	canonical	1	21433	junction_4	410814.6146965198	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	211	654	35.0	-37	False	AATAAA	-10
PB.6754.1	chr2	+	4164	24	full-splice_match	RAB3GAP1	ENST00000264158.12	4914	24	18	732	-15	-3	multi-exon	FALSE	canonical	1	260691	junction_1	91662.69893135355	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	26	2971	85.0	-10	True	AATAGA	-26
PB.6754.3	chr2	+	3417	24	novel_in_catalog	RAB3GAP1	novel	4914	24	NA	NA	-15	282	no_combination_of_known_junctions	FALSE	canonical	1	4950	junction_3	162985.59498813705	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	339	2888	100.0	-10	True	NA	NA
PB.6754.2	chr2	+	3398	24	full-splice_match	RAB3GAP1	ENST00000264158.12	4914	24	27	1489	-6	-760	multi-exon	FALSE	canonical	1	260691	junction_1	91662.69893135355	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	17	2962	15.0	-1	True	AATAAA	-25
PB.6754.5	chr2	+	2677	4	novel_not_in_catalog	RAB3GAP1	novel	4914	24	NA	NA	-13	3742	any annotated donor/acceptor	FALSE	canonical	1	1589	junction_3	172455.72500983163	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	NA	NA
PB.7994.18	chr3	+	2589	7	incomplete-splice_match	STT3B	ENST00000295770.3	4248	16	89425	5	-3846	-5	5prime_fragment	FALSE	canonical	1	1021804	junction_2	254854.95211813893	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	17	1036	20.0	3747	False	AATAAA	-18
PB.6754.7	chr2	+	3344	3	full-splice_match	RAB3GAP1	ENST00000425393.1	1139	3	-13	-2192	-12	2192	multi-exon	FALSE	canonical	1	260691	junction_1	79692.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-7	True	NA	NA
PB.6651.4	chr2	+	1905	1	novel_in_catalog	AC079447.1	novel	1947	14	NA	NA	39667	-139677	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	0	True	NA	NA
PB.4653.1	chr17	+	6892	10	novel_not_in_catalog	WDR81	novel	570	4	NA	NA	14	0	any annotated donor/acceptor	TRUE	canonical	1	7820	junction_8	48218.10051816897	NA	0	NA	TRUE	NA	NA	NA	C	coding	1818	5457	257	5713	15.0	-12	True	AATAAA	-24
PB.6754.8	chr2	+	3628	24	full-splice_match	RAB3GAP1	ENST00000264158.12	4914	24	22	1264	-11	-535	multi-exon	FALSE	canonical	1	260691	junction_1	91662.69893135355	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	22	2967	30.0	-6	True	GATAAA	-22
PB.4653.3	chr17	+	4602	1	novel_in_catalog	WDR81	novel	570	4	NA	NA	26	-1520	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	1267	3804	245	4048	65.0	0	True	NA	NA
PB.4653.2	chr17	+	6978	10	full-splice_match	WDR81	ENST00000409644.5	6733	10	-252	7	18	1	multi-exon	FALSE	canonical	1	116522	junction_6	18613.51103067041	NA	0	NA	TRUE	NA	NA	NA	C	coding	1941	5826	253	6078	15.0	-8	True	AATAAA	-17
PB.4653.4	chr17	+	4287	10	full-splice_match	WDR81	ENST00000409644.5	6733	10	2440	6	-174	2	multi-exon	FALSE	canonical	1	116522	junction_6	18613.51103067041	NA	21	1	TRUE	NA	NA	NA	C	coding	1114	3345	42	3386	15.0	-8702	False	AATAAA	-18
PB.6309.13	chr2	+	2211	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	10	1050	1	-1050	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	60	1229	20.0	1	True	NA	NA
PB.11975.7	chrX	-	2131	7	full-splice_match	GPM6B	ENST00000454189.6	3957	7	-45	1871	-45	-473	multi-exon	FALSE	canonical	1	245284	junction_6	158691.35353231023	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	174	914	85.0	150	False	TTTAAA	-21
PB.6309.11	chr2	+	3423	1	novel_in_catalog	RRM2	novel	3431	11	NA	NA	1	-1058	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1	True	NA	NA
PB.6309.10	chr2	+	1721	9	incomplete-splice_match	RRM2	ENST00000304567.9	3271	10	9	1620	0	485	intron_retention	FALSE	canonical	1	256426	junction_4	268999.41190723353	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	61	1146	35.0	0	True	AATAAA	-17
PB.6309.17	chr2	+	2762	6	incomplete-splice_match	RRM2	ENST00000304567.9	3271	10	1987	5	1546	-5	5prime_fragment	FALSE	canonical	1	376799	junction_1	225604.86505800358	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	67	735	30.0	-9008	False	AATAAA	-15
PB.6309.16	chr2	+	3201	8	incomplete-splice_match	RRM2	ENST00000304567.9	3271	10	479	5	38	-5	5prime_fragment	FALSE	canonical	1	256426	junction_2	320218.8871229255	NA	1	1	TRUE	NA	NA	NA	C	coding	339	1020	155	1174	30.0	-11	True	AATAAA	-15
PB.6309.15	chr2	+	2520	11	novel_not_in_catalog	RRM2	novel	3431	11	NA	NA	5	1214	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	341576.6495092427	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	56	1225	20.0	5	True	AATAAA	-13
PB.5227.12	chr17	+	2289	6	novel_in_catalog	CD300A	novel	1785	7	NA	NA	-24	-2	intron_retention	FALSE	canonical	1	193648	junction_2	40568.39452283021	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1118	1627	30.0	0	True	AGTAAA	-10
PB.11975.5	chrX	-	4025	7	full-splice_match	GPM6B	ENST00000454189.6	3957	7	-70	2	-70	-2	multi-exon	FALSE	canonical	1	245284	junction_6	158691.35353231023	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	199	939	25.0	2	True	ATTAAA	-17
PB.11975.4	chrX	-	4423	7	full-splice_match	GPM6B	ENST00000454189.6	3957	7	-42	-424	-42	-1	multi-exon	FALSE	canonical	1	245284	junction_6	158691.35353231023	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	171	911	25.0	153	False	AATAAA	-18
PB.1454.2	chr10	+	2172	15	full-splice_match	SGPL1	ENST00000373202.7	5745	15	-21	3594	-12	-3594	multi-exon	FALSE	canonical	1	156326	junction_1	53710.74975861586	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	222	1928	30.0	1	True	TATAAA	-10
PB.1454.1	chr10	+	4726	15	full-splice_match	SGPL1	ENST00000373202.7	5745	15	-46	1065	-37	-1065	multi-exon	FALSE	canonical	1	156326	junction_1	53710.74975861586	NA	2	NA	TRUE	NA	NA	NA	C	coding	568	1707	247	1953	25.0	-24	True	ATTAAA	-22
PB.7994.12	chr3	+	3213	12	novel_not_in_catalog	STT3B	novel	1888	10	NA	NA	10705	-6	any annotated donor/acceptor	FALSE	canonical	1	18	junction_1	503437.7558946731	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	96	1661	15.0	-9692	False	AATAAA	-17
PB.3026.2	chr12	-	3215	15	novel_not_in_catalog	POLE	novel	2105	2	NA	NA	6	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	126220.31889188194	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	73	2277	15.0	0	True	NA	NA
PB.7741.2	chr22	+	2232	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	3	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131496.13702743853	NA	2	1	TRUE	NA	NA	NA	B	coding	398	1197	166	1362	20.0	-16	True	NA	NA
PB.7741.3	chr22	+	2376	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131496.13702743853	NA	4	1	TRUE	NA	NA	NA	B	coding	398	1197	160	1356	15.0	-10	True	NA	NA
PB.7741.4	chr22	+	2187	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	2	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	161979.75664612814	NA	1	NA	TRUE	NA	NA	NA	B	coding	339	1020	376	1395	20.0	-10	True	NA	NA
PB.7741.5	chr22	+	2055	7	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	12	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131496.13702743853	NA	0	NA	TRUE	NA	NA	NA	B	coding	339	1020	327	1346	20.0	0	True	NA	NA
PB.7741.6	chr22	+	2291	8	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	13	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	171229.7494051397	NA	1	NA	TRUE	NA	NA	NA	B	coding	414	1245	255	1499	20.0	1	True	NA	NA
PB.7741.8	chr22	+	2083	6	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	13	-1	any annotated donor/acceptor	FALSE	canonical	1	539	junction_5	165552.20213866077	NA	1	NA	TRUE	NA	NA	NA	B	coding	380	1143	149	1291	20.0	1	True	NA	NA
PB.7741.9	chr22	+	2317	8	novel_not_in_catalog	APOL1	novel	2918	6	NA	NA	21	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	173031.79433684598	NA	1	NA	TRUE	NA	NA	NA	B	coding	275	828	698	1525	20.0	9	True	NA	NA
PB.11284.11	chr8	-	4279	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	468159.59072529577	NA	3	1	TRUE	NA	NA	NA	C	coding	448	1347	724	2070	15.0	-1	True	GATAAA	-15
PB.11284.16	chr8	-	3827	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-48	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	439036.90812905546	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	592	1665	20.0	-2	True	AGTAAA	-15
PB.11284.14	chr8	-	4012	11	novel_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-1	no_combination_of_known_junctions	FALSE	canonical	1	1810	junction_6	464545.2531365378	NA	2	NA	TRUE	NA	NA	NA	C	coding	403	1212	592	1803	15.0	-2	True	GATAAA	-15
PB.11284.15	chr8	-	3851	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-48	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	439036.90812905546	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	591	1682	20.0	-1	True	AGTAAA	-15
PB.10259.1	chr6	+	4114	2	full-splice_match	STX11	ENST00000367568.4	1926	2	-16	-2172	-16	2172	multi-exon	FALSE	canonical	1	95252	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	200	1063	55.0	-7	True	AATAAA	-41
PB.7442.1	chr21	-	4338	1	novel_in_catalog	CU634019.6	novel	710	5	NA	NA	5925	-987	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	B	coding	195	588	1665	2252	75.0	NA	False	NA	NA
PB.10259.3	chr6	+	2282	2	full-splice_match	STX11	ENST00000367568.4	1926	2	-73	-283	-73	283	multi-exon	FALSE	canonical	1	95252	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	257	1120	25.0	-5227	False	AATAAA	-15
PB.3026.1	chr12	-	7864	49	full-splice_match	POLE	ENST00000320574.9	7840	49	-18	-6	-12	-3	multi-exon	TRUE	canonical	1	96231	junction_48	88003.70730246953	NA	0	NA	TRUE	NA	NA	NA	C	coding	2286	6861	63	6923	10.0	-36	True	NA	NA
PB.10787.1	chr7	-	1817	4	novel_not_in_catalog	IMMP2L	novel	1522	6	NA	NA	0	67593	any annotated donor/acceptor	FALSE	canonical	1	20852	junction_1	86728.7419140852	NA	0	NA	TRUE	NA	NA	NA	A	coding	137	414	77	490	35.0	567	False	ATTAAA	-15
PB.10259.4	chr6	+	5523	2	full-splice_match	STX11	ENST00000367568.4	1926	2	-13	-3584	-13	3584	multi-exon	FALSE	canonical	1	95252	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	197	1060	45.0	-4	True	AATAAA	-31
PB.9383.12	chr5	+	4209	4	novel_not_in_catalog	SLC25A46	novel	558	8	NA	NA	-304	-11	any annotated donor/acceptor	FALSE	canonical	1	76	junction_1	228724.92800207756	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	224	841	35.0	-3720	False	AATAAA	-7
PB.6088.1	chr19	-	2770	16	novel_in_catalog	DMPK	novel	2787	15	NA	NA	-15	6	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_1	159335.9734084763	NA	0	NA	TRUE	NA	NA	NA	B	coding	630	1893	153	2045	15.0	1	True	AATAAA	-27
PB.6766.8	chr2	-	2805	13	novel_not_in_catalog	GTDC1	novel	10514	11	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	3497	junction_7	51773.181311745655	NA	0	NA	TRUE	NA	NA	NA	B	coding	507	1524	254	1777	35.0	43	True	AATAAA	-22
PB.6766.9	chr2	-	2416	12	novel_in_catalog	GTDC1	novel	10514	11	NA	NA	14	-194	combination_of_known_junctions	FALSE	canonical	1	40221	junction_11	36542.62375015585	NA	3	NA	TRUE	NA	NA	NA	B	coding	458	1377	215	1591	75.0	4	True	CATAAA	-41
PB.6436.2	chr2	+	2512	15	novel_in_catalog	MTA3	novel	5832	18	NA	NA	-372	-2	combination_of_known_junctions	FALSE	canonical	1	13948	junction_2	159230.7590878049	NA	3	NA	TRUE	NA	NA	NA	C	coding	459	1380	1043	2422	15.0	-372	False	AATAAA	-15
PB.3026.4	chr12	-	8166	48	novel_not_in_catalog	POLE	novel	2105	2	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_39	95827.72369175301	NA	28	3	TRUE	NA	NA	NA	C	coding	1657	4974	2258	7231	15.0	30	False	NA	NA
PB.646.3	chr1	+	6263	13	full-splice_match	MAN1A2	ENST00000356554.7	8576	13	11	2302	11	1218	multi-exon	FALSE	canonical	1	164367	junction_10	225100.74180444123	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	725	2650	45.0	-2	True	AATAAA	-23
PB.6766.2	chr2	-	2385	10	novel_in_catalog	GTDC1	novel	10514	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	12210	junction_3	48228.61606075591	NA	0	NA	TRUE	NA	NA	NA	B	coding	373	1122	228	1349	40.0	-9	True	AATAAA	-30
PB.6766.3	chr2	-	2886	14	novel_not_in_catalog	GTDC1	novel	10514	11	NA	NA	14	-1	any annotated donor/acceptor	FALSE	canonical	1	3366	junction_13	53211.993804395766	NA	0	NA	TRUE	NA	NA	NA	B	coding	458	1377	475	1851	35.0	4	True	AATAAA	-29
PB.9383.11	chr5	+	2083	9	novel_not_in_catalog	SLC25A46	novel	558	8	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152497.77827479978	NA	4	1	TRUE	NA	NA	NA	C	coding	272	819	261	1079	15.0	34	True	ATTAAA	-16
PB.6766.6	chr2	-	2574	11	novel_in_catalog	GTDC1	novel	10514	11	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	533	junction_10	45270.62169277113	NA	0	NA	TRUE	NA	NA	NA	B	coding	458	1377	163	1539	35.0	-6	True	AATAAA	-29
PB.6766.7	chr2	-	2507	11	novel_in_catalog	GTDC1	novel	10514	11	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	17762	junction_3	45446.436233108536	NA	0	NA	TRUE	NA	NA	NA	B	coding	376	1131	241	1371	35.0	56	False	AATAAA	-29
PB.6766.4	chr2	-	2850	13	novel_not_in_catalog	GTDC1	novel	10514	11	NA	NA	14	-1	any annotated donor/acceptor	FALSE	canonical	1	4612	junction_9	48559.15576980708	NA	5	NA	TRUE	NA	NA	NA	B	coding	458	1377	439	1815	35.0	4	True	AATAAA	-29
PB.6766.5	chr2	-	2799	13	novel_not_in_catalog	GTDC1	novel	10514	11	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	765	junction_12	51133.95665200268	NA	2	1	TRUE	NA	NA	NA	B	coding	458	1377	388	1764	35.0	46	True	AATAAA	-29
PB.261.5	chr1	-	1488	6	full-splice_match	ZBTB8OS	ENST00000436661.5	514	6	29	-1003	4	-7	multi-exon	FALSE	canonical	1	84063	junction_4	133946.4957594636	NA	4	NA	TRUE	NA	NA	NA	C	coding	136	411	3	413	30.0	13	True	AATAAA	-12
PB.6088.2	chr19	-	2792	15	novel_in_catalog	DMPK	novel	2787	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	122546	junction_2	129793.58154557786	NA	1	NA	TRUE	NA	NA	NA	B	coding	630	1893	139	2031	30.0	-1	True	AATAAA	-18
PB.388.1	chr1	+	1559	6	full-splice_match	NSUN4	ENST00000474844.5	2150	6	591	0	-21	0	multi-exon	FALSE	canonical	1	154333	junction_1	52105.98721298733	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	60	1214	15.0	-465	False	AATAAA	-16
PB.534.4	chr1	+	4019	11	novel_in_catalog	CDC7	novel	3173	12	NA	NA	-51	-1	intron_retention	FALSE	canonical	1	81588	junction_1	33527.737037265135	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	171	1271	30.0	-26	True	AATAAA	-21
PB.6436.3	chr2	+	2439	14	novel_in_catalog	MTA3	novel	5832	18	NA	NA	-488	1	no_combination_of_known_junctions	FALSE	canonical	1	9888	junction_9	184588.71362053216	NA	3	NA	TRUE	NA	NA	NA	C	coding	395	1188	1159	2346	15.0	-29	True	AATAAA	-18
PB.11676.4	chr9	-	1605	6	novel_in_catalog	TRMO	novel	1647	5	NA	NA	-9	-11	intron_retention	FALSE	canonical	1	21681	junction_2	44165.232584013414	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	548	1435	65.0	0	True	AATAAA	-4
PB.5960.3	chr19	-	3097	5	full-splice_match	ZNF585A	ENST00000292841.9	8618	5	23	5498	8	-28	multi-exon	FALSE	canonical	1	11963	junction_3	54108.07106615426	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	237	2546	85.0	-26	True	AAGAAA	-11
PB.5960.2	chr19	-	3197	6	full-splice_match	ZNF585A	ENST00000356958.8	6822	6	25	3600	10	-28	multi-exon	FALSE	canonical	1	7407	junction_3	61785.81963719507	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	502	2646	85.0	-24	True	AAGAAA	-11
PB.5960.1	chr19	-	4071	5	full-splice_match	ZNF585A	ENST00000292841.9	8618	5	-15	4562	-15	908	multi-exon	FALSE	canonical	1	11963	junction_3	54108.07106615426	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	275	2584	95.0	8937	False	NA	NA
PB.11186.11	chr8	-	1686	6	full-splice_match	UBE2W	ENST00000602593.5	2201	6	-81	596	3	-593	multi-exon	FALSE	canonical	1	86899	junction_2	49574.602181358954	NA	3	NA	TRUE	NA	NA	NA	C	coding	151	456	85	540	35.0	-47	False	AATACA	-28
PB.6617.12	chr2	-	1934	3	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-166151	-49181	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	724145.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	130	393	31	423	70.0	NA	False	ATTAAA	-27
PB.6617.11	chr2	-	2189	4	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-406939	-47918	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	109	330	96	425	25.0	NA	False	AATAAA	-18
PB.6617.10	chr2	-	2794	3	novel_not_in_catalog	AC244205.1	novel	705	3	NA	NA	-406937	-47438	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	1	FALSE	NA	NA	NA	B	coding	103	312	225	536	60.0	NA	False	NA	NA
PB.6187.11	chr19	-	4286	4	full-splice_match	ZNF83	ENST00000600457.5	596	4	-56	-3634	-56	3634	multi-exon	FALSE	canonical	1	31601	junction_1	26403.846971395833	NA	7	NA	TRUE	NA	NA	NA	C	coding	641	1926	130	2055	60.0	1	True	NA	NA
PB.416.1	chr1	+	2391	5	full-splice_match	CPT2	ENST00000636867.1	2643	5	-3	255	-3	77	multi-exon	TRUE	canonical	1	15796	junction_4	79766.81242651922	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	156	2063	90.0	-35	True	NA	NA
PB.11887.7	chr9	-	2665	14	novel_not_in_catalog	VAV2	novel	4691	27	NA	NA	153451	-335	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	115574.94397332784	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	38	1093	10.0	6817	False	NA	NA
PB.6826.1	chr2	-	876	8	full-splice_match	METTL5	ENST00000409965.5	880	8	1	3	1	-2	multi-exon	FALSE	canonical	1	313408	junction_7	228078.21961756537	NA	0	NA	TRUE	NA	NA	NA	A	coding	209	630	187	816	30.0	-20	True	AATAAA	-14
PB.11147.3	chr8	-	3358	31	full-splice_match	NSMAF	ENST00000038176.7	3569	31	204	7	-2	-7	multi-exon	FALSE	canonical	1	159507	junction_30	65451.24062877308	NA	0	NA	TRUE	NA	NA	NA	C	coding	917	2754	10	2763	35.0	-3	True	ATTAAA	-14
PB.11856.1	chr9	+	5074	28	full-splice_match	LAMC3	ENST00000361069.8	6133	28	50	1009	-42	7	multi-exon	FALSE	canonical	1	23414	junction_4	11939.571098858256	NA	1	NA	TRUE	NA	NA	NA	A	coding	1575	4728	84	4811	45.0	-55	False	CATAAA	-19
PB.6364.4	chr2	+	4633	10	full-splice_match	SELENOI	ENST00000260585.11	8101	10	7	3461	7	-3461	multi-exon	FALSE	canonical	1	111249	junction_8	48848.211499159996	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	113	1273	25.0	-25	True	AATAAA	-12
PB.6364.5	chr2	+	6416	10	full-splice_match	SELENOI	ENST00000260585.11	8101	10	19	1666	-16	-1666	multi-exon	FALSE	canonical	1	111249	junction_8	48848.211499159996	NA	3	NA	TRUE	NA	NA	NA	C	coding	386	1161	101	1261	75.0	-13	True	NA	NA
PB.6364.6	chr2	+	2785	10	full-splice_match	SELENOI	ENST00000260585.11	8101	10	19	5297	-16	-5297	multi-exon	FALSE	canonical	1	111249	junction_8	48848.211499159996	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	101	1261	35.0	-13	True	TATAAA	-5
PB.9337.10	chr5	-	4147	11	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	14	-12	combination_of_known_junctions	FALSE	canonical	1	3489	junction_9	194424.8760656928	NA	4	NA	TRUE	NA	NA	NA	C	coding	465	1398	495	1892	75.0	5	True	CATAAA	-38
PB.261.3	chr1	-	1534	6	full-splice_match	ZBTB8OS	ENST00000373506.7	766	6	10	-778	5	-6	multi-exon	FALSE	canonical	1	8209	junction_5	158867.27251715504	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	16	498	30.0	0	True	AATAAA	-13
PB.6364.1	chr2	+	3210	10	full-splice_match	SELENOI	ENST00000260585.11	8101	10	3	4888	3	-4888	multi-exon	FALSE	canonical	1	111249	junction_8	48848.211499159996	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	117	1277	50.0	-29	True	GATAAA	-8
PB.6364.2	chr2	+	8151	10	full-splice_match	SELENOI	ENST00000260585.11	8101	10	-56	6	-28	-6	multi-exon	TRUE	canonical	1	111249	junction_8	48848.211499159996	NA	6	NA	TRUE	NA	NA	NA	C	coding	386	1161	176	1336	10.0	-108	False	AATAAA	-31
PB.9531.1	chr5	-	3825	3	full-splice_match	PCDH1	ENST00000394536.4	3827	3	0	2	0	-2	multi-exon	FALSE	canonical	1	42428	junction_2	91818.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	1060	3183	149	3331	10.0	-3	True	AATAAA	-15
PB.1557.33	chr10	+	5083	9	incomplete-splice_match	ENTPD1	ENST00000371205.4	2035	10	206	-1939	1	-1154	intron_retention	FALSE	canonical	1	202323	junction_7	64622.27336994575	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	78	1502	25.0	0	True	AATAAA	-19
PB.1557.32	chr10	+	2247	11	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	7564	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	135896.72271430978	NA	22	2	TRUE	NA	NA	NA	C	coding	447	1344	78	1421	40.0	0	True	AATAAA	-10
PB.1557.31	chr10	+	2196	10	full-splice_match	ENTPD1	ENST00000371205.4	2035	10	206	-367	1	216	multi-exon	FALSE	canonical	1	202323	junction_7	60927.94955995357	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	78	1610	35.0	0	True	AATATA	-16
PB.1557.30	chr10	+	2414	6	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	1157	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	140042.95851345043	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	273	887	20.0	0	True	AATAAA	-13
PB.1557.36	chr10	+	3256	10	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	392	1163	any annotated donor/acceptor	FALSE	canonical	1	1186	junction_1	112034.39387025996	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	113	1723	15.0	7	True	AATAAA	-19
PB.1557.35	chr10	+	2652	8	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	6	1157	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	120757.59017138426	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	73	1125	20.0	5	True	AATAAA	-13
PB.1557.34	chr10	+	2070	11	novel_not_in_catalog	ENTPD1	novel	5044	10	NA	NA	1	8	any annotated donor/acceptor	FALSE	canonical	1	3428	junction_10	134452.40543924828	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	78	1430	35.0	0	True	TATAAA	-21
PB.12054.1	chrX	-	2903	7	full-splice_match	ELK1	ENST00000376983.7	2258	7	1	-646	1	0	multi-exon	FALSE	canonical	1	117405	junction_6	134654.53975637062	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	309	1595	10.0	8546	False	AATATA	-16
PB.12054.2	chrX	-	4139	4	novel_in_catalog	ELK1	novel	2695	6	NA	NA	6	-1	intron_retention	FALSE	canonical	1	150703	junction_3	141472.20059785596	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	198	869	15.0	8551	False	AATATA	-15
PB.12054.3	chrX	-	2792	6	full-splice_match	ELK1	ENST00000247161.7	2695	6	-98	1	5	-1	multi-exon	FALSE	canonical	1	150703	junction_5	111740.81387389301	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	199	1485	15.0	8550	False	AATATA	-15
PB.12054.4	chrX	-	2730	7	novel_not_in_catalog	ELK1	novel	2695	6	NA	NA	6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	165796.2130595536	NA	2	NA	TRUE	NA	NA	NA	C	coding	428	1287	198	1484	15.0	8551	False	AATATA	-15
PB.3020.1	chr12	+	2368	11	novel_not_in_catalog	MMP17	novel	2411	10	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	38771.39968120831	NA	1	1	TRUE	NA	NA	NA	B	coding	519	1560	312	1871	5.0	-11	True	NA	NA
PB.3020.2	chr12	+	2257	11	novel_not_in_catalog	MMP17	novel	2411	10	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	38771.39968120831	NA	0	NA	TRUE	NA	NA	NA	B	coding	519	1560	201	1760	5.0	-7	True	NA	NA
PB.11344.4	chr8	-	5611	30	novel_not_in_catalog	ASAP1	novel	5478	24	NA	NA	29	90	any annotated donor/acceptor	TRUE	canonical	0	0	junction_26	111268.403057347	NA	7	1	TRUE	NA	NA	NA	C	coding	937	2814	819	3632	95.0	42	True	AATAAA	-13
PB.8721.9	chr4	+	2291	13	full-splice_match	ZCCHC4	ENST00000302874.8	2785	13	21	473	-11	-116	multi-exon	FALSE	canonical	1	73587	junction_6	15521.238736316192	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	4	1545	40.0	33	True	TTTAAA	-5
PB.8721.8	chr4	+	4848	6	incomplete-splice_match	ZCCHC4	ENST00000505451.5	1504	9	2	2855	1	1	intron_retention	FALSE	canonical	1	77673	junction_5	16394.813777533433	NA	1	NA	TRUE	NA	NA	NA	C	coding	279	840	24	863	30.0	13	True	AATAAA	-18
PB.8721.7	chr4	+	2090	9	full-splice_match	ZCCHC4	ENST00000505451.5	1504	9	0	-586	0	586	multi-exon	FALSE	canonical	1	3499	junction_8	33894.82633732617	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	26	1045	10.0	11	True	NA	NA
PB.4055.1	chr15	-	3656	3	full-splice_match	KLHL25	ENST00000337975.5	3758	3	95	7	-17	0	multi-exon	FALSE	canonical	1	29011	junction_2	9916.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	589	1770	181	1950	20.0	-23	False	AATAAA	-11
PB.8721.5	chr4	+	2379	12	incomplete-splice_match	ZCCHC4	ENST00000302874.8	2785	13	-2	4270	-1	-2	3prime_fragment	FALSE	canonical	1	73587	junction_6	15625.147697285409	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	27	1535	20.0	10	True	NA	NA
PB.8721.4	chr4	+	2943	12	incomplete-splice_match	ZCCHC4	ENST00000302874.8	2785	13	-11	3715	-10	553	3prime_fragment	FALSE	canonical	1	73587	junction_6	15625.147697285409	NA	2	NA	TRUE	NA	NA	NA	C	coding	502	1509	36	1544	40.0	1	True	AATAAA	-19
PB.8721.3	chr4	+	3647	13	full-splice_match	ZCCHC4	ENST00000302874.8	2785	13	-11	-851	-10	851	multi-exon	FALSE	canonical	1	73587	junction_6	15521.238736316192	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	36	1577	75.0	1	True	NA	NA
PB.5276.10	chr17	+	2485	13	full-splice_match	MFSD11	ENST00000588460.5	3612	13	1809	-682	24	0	multi-exon	FALSE	canonical	1	143482	junction_8	41996.27002708098	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	234	1583	100.0	1	True	NA	NA
PB.8721.1	chr4	+	2463	13	full-splice_match	ZCCHC4	ENST00000302874.8	2785	13	-18	340	-17	17	multi-exon	FALSE	canonical	1	73587	junction_6	15521.238736316192	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	43	1584	10.0	-6	True	NA	NA
PB.1245.3	chr1	-	7191	35	novel_in_catalog	AHCTF1	novel	7041	26	NA	NA	20	423	no_combination_of_known_junctions	FALSE	canonical	1	25	junction_20	33192.40069753533	NA	5	NA	TRUE	NA	NA	NA	C	coding	2062	6189	736	6924	5.0	0	True	AATAAA	-18
PB.11862.10	chr9	+	2651	20	full-splice_match	POMT1	ENST00000372228.7	3123	20	4	468	4	-460	multi-exon	FALSE	canonical	1	12135	junction_8	86217.66911711845	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	176	2419	45.0	-15	True	AATAAA	-23
PB.489.1	chr1	+	2344	6	novel_not_in_catalog	GIPC2	novel	312	3	NA	NA	-943	-1206	any annotated donor/acceptor	FALSE	canonical	1	2153	junction_1	14401.298949747554	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	119	844	15.0	-1264	False	AATAAA	-18
PB.8708.3	chr4	-	1439	7	full-splice_match	QDPR	ENST00000281243.9	1648	7	81	128	53	1	multi-exon	FALSE	canonical	1	583355	junction_6	145918.28372804722	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	100	834	45.0	80	False	AATAAA	-25
PB.3016.3	chr12	+	2985	12	full-splice_match	GLT1D1	ENST00000442111.6	2995	12	13	-3	13	3	multi-exon	FALSE	canonical	1	19176	junction_1	33122.6296094971	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	76	1116	35.0	29	True	AATAAA	-18
PB.3016.2	chr12	+	2761	8	full-splice_match	GLT1D1	ENST00000281703.10	2725	8	-41	5	1	-5	multi-exon	FALSE	canonical	1	11172	junction_4	39356.28390454961	NA	3	NA	TRUE	NA	NA	NA	C	coding	266	801	88	888	25.0	17	True	AATAAA	-22
PB.3016.1	chr12	+	2920	10	novel_in_catalog	GLT1D1	novel	3010	11	NA	NA	-14	5	no_combination_of_known_junctions	TRUE	canonical	1	7128	junction_4	40785.613536886354	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	103	519	30.0	2	True	AATAAA	-20
PB.2712.4	chr12	+	2814	4	full-splice_match	EEF1AKMT3	ENST00000333012.5	2762	4	-53	1	25	-1	multi-exon	TRUE	canonical	1	5973	junction_3	19865.191421736217	NA	2	NA	TRUE	NA	NA	NA	C	coding	149	450	101	550	5.0	11	True	NA	NA
PB.2712.3	chr12	+	2631	3	novel_in_catalog	EEF1AKMT3	novel	561	4	NA	NA	11	-4	no_combination_of_known_junctions	FALSE	canonical	1	4939	junction_2	21812.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	90	273	115	387	10.0	-3	True	NA	NA
PB.2712.2	chr12	+	2675	3	full-splice_match	EEF1AKMT3	ENST00000300209.12	2563	3	25	-137	25	-1	multi-exon	FALSE	canonical	1	34569	junction_2	6997.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	226	681	101	781	5.0	11	True	NA	NA
PB.2712.1	chr12	+	2595	3	full-splice_match	EEF1AKMT3	ENST00000551420.1	836	3	4	-1763	4	2	multi-exon	FALSE	canonical	1	26496	junction_1	4036.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	45	138	561	698	0.0	-9175	False	NA	NA
PB.3016.4	chr12	+	2835	11	novel_in_catalog	GLT1D1	novel	3010	11	NA	NA	13	2	no_combination_of_known_junctions	FALSE	canonical	1	4654	junction_1	37426.85746359157	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	53	967	35.0	29	True	AATAAA	-17
PB.5679.2	chr19	-	3486	10	full-splice_match	ZNF558	ENST00000601372.5	7032	10	10	3536	-4	0	multi-exon	FALSE	canonical	1	34948	junction_9	35229.642020798055	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	703	1911	40.0	-15	False	AATAAA	-23
PB.6162.1	chr19	+	1718	7	full-splice_match	EMC10	ENST00000334976.10	9446	7	-11	7739	-11	-67	multi-exon	TRUE	canonical	1	604815	junction_1	344753.8287225957	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	58	846	30.0	1	True	TTTAAA	-18
PB.6162.2	chr19	+	2473	7	full-splice_match	EMC10	ENST00000334976.10	9446	7	7	6966	7	553	multi-exon	FALSE	canonical	1	604815	junction_1	344753.8287225957	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	40	828	15.0	-5	True	AATAAA	-22
PB.6162.3	chr19	+	1914	7	full-splice_match	EMC10	ENST00000334976.10	9446	7	12	7520	-10	-1	multi-exon	FALSE	canonical	1	604815	junction_1	344753.8287225957	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	35	823	20.0	0	True	ATTAAA	-22
PB.1245.2	chr1	-	8658	36	full-splice_match	AHCTF1	ENST00000648844.1	8892	36	-17	251	-17	-251	multi-exon	FALSE	canonical	1	25	junction_20	32946.36615131214	NA	0	NA	TRUE	NA	NA	NA	C	coding	2266	6801	415	7215	35.0	5	True	AATAAA	-20
PB.305.1	chr1	+	4513	7	novel_in_catalog	UTP11	novel	573	6	NA	NA	-16	0	intron_retention	FALSE	canonical	1	681596	junction_1	119010.56249727024	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	3786	4340	25.0	-16	True	ATTAAA	-17
PB.5679.3	chr19	-	3737	11	novel_in_catalog	ZNF558	novel	7032	10	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	18555	junction_8	41640.12550521432	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	955	2163	35.0	-15	False	AATAAA	-22
PB.1245.1	chr1	-	8904	36	full-splice_match	AHCTF1	ENST00000648844.1	8892	36	13	-25	13	11	multi-exon	TRUE	canonical	1	25	junction_20	32946.36615131214	NA	0	NA	TRUE	NA	NA	NA	C	coding	2266	6801	385	7185	35.0	-7	True	AATAAA	-29
PB.1156.1	chr1	+	1781	1	antisense	novelGene_ENAH_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	NA	False	AATGAA	-30
PB.11676.3	chr9	-	3590	6	novel_in_catalog	TRMO	novel	1647	5	NA	NA	0	2	intron_retention	FALSE	canonical	1	12529	junction_2	46289.03583614591	NA	13	NA	TRUE	NA	NA	NA	C	coding	338	1017	2391	3407	60.0	-17	True	AATAAA	-17
PB.10483.4	chr7	+	2945	1	full-splice_match	AC018647.2	ENST00000605778.1	4200	1	22	1233	22	-1233	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.10722.1	chr7	-	2561	10	full-splice_match	GPC2	ENST00000292377.3	2532	10	-25	-4	-20	4	multi-exon	TRUE	canonical	1	37500	junction_2	18431.542426563825	NA	0	NA	TRUE	NA	NA	NA	A	coding	579	1740	194	1933	5.0	-33	True	AATAAA	-20
PB.5607.1	chr19	-	4020	1	antisense	novelGene_S1PR4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	287	864	1	864	25.0	5236	False	NA	NA
PB.11612.1	chr9	+	9729	72	full-splice_match	VPS13A	ENST00000644843.1	15229	72	85	5415	85	-6	multi-exon	TRUE	canonical	1	66247	junction_7	52924.07473155512	NA	1	NA	TRUE	NA	NA	NA	C	coding	3174	9525	85	9609	85.0	1	True	NA	NA
PB.1291.10	chr10	-	1800	3	full-splice_match	USP6NL	ENST00000606752.1	1823	3	26	-3	26	3	multi-exon	FALSE	canonical	1	2073	junction_1	50446.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-36	True	AATAAA	-18
PB.9976.14	chr6	+	6321	25	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	-27319	0	any annotated donor/acceptor	FALSE	canonical	1	6030	junction_1	31626.045760679553	NA	2	NA	TRUE	NA	NA	NA	C	coding	1068	3207	284	3490	20.0	0	True	ATTAAA	-19
PB.3464.1	chr14	+	2318	13	full-splice_match	ACTR10	ENST00000254286.8	2419	13	-17	118	-17	-118	multi-exon	TRUE	non_canonical	0	0	junction_5	207986.65562375763	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	98	1351	10.0	-30	True	TATAAA	-21
PB.3464.2	chr14	+	2425	13	full-splice_match	ACTR10	ENST00000254286.8	2419	13	-9	3	-9	-3	multi-exon	FALSE	non_canonical	0	0	junction_5	207986.65562375763	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	90	1343	20.0	-22	True	NA	NA
PB.3464.3	chr14	+	1567	13	full-splice_match	ACTR10	ENST00000254286.8	2419	13	15	837	-1	9	multi-exon	FALSE	non_canonical	0	0	junction_5	207986.65562375763	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	66	1319	15.0	2	True	AATAAA	-23
PB.9976.10	chr6	+	4187	26	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	1	930	junction_25	34649.79954472464	NA	1	NA	TRUE	NA	NA	NA	C	coding	1068	3207	146	3352	25.0	1	True	ATTAAA	-14
PB.9976.11	chr6	+	3353	25	full-splice_match	DAAM2	ENST00000274867.8	6194	25	11	2830	1	-412	multi-exon	FALSE	canonical	1	47997	junction_1	25979.198062531148	NA	2	NA	TRUE	NA	NA	NA	C	coding	1068	3207	146	3352	30.0	1	True	AATAAA	-18
PB.9976.12	chr6	+	3338	15	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	41682.325209094735	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	146	2056	20.0	1	True	ATTAAA	-19
PB.9976.13	chr6	+	6259	25	full-splice_match	DAAM2	ENST00000398904.6	6224	25	-43	8	-22	-1	multi-exon	FALSE	canonical	1	3533	junction_1	31999.913749449737	NA	4	NA	TRUE	NA	NA	NA	C	coding	1068	3207	226	3432	25.0	-5	True	ATTAAA	-15
PB.15.3	chr1	-	2201	16	novel_in_catalog	INTS11	novel	2369	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	546692	junction_12	148170.3550658123	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	53	1471	10.0	-1	True	AGTAAA	-16
PB.15.2	chr1	-	2089	17	novel_not_in_catalog	INTS11	novel	2369	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	4024	junction_7	233805.56871561805	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	53	1828	10.0	-1	True	AGTAAA	-17
PB.15.1	chr1	-	2574	16	novel_in_catalog	INTS11	novel	2369	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	546692	junction_12	140019.39276152666	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	1111	2313	10.0	-1	True	AGTAAA	-17
PB.11851.7	chr9	+	2907	18	incomplete-splice_match	GPR107	ENST00000372410.7	6991	19	201	10146	-14	-1	3prime_fragment	FALSE	canonical	1	42578	junction_15	104452.10392510351	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	27	1649	5.0	0	True	TTTAAA	-4
PB.15.7	chr1	-	2095	17	full-splice_match	INTS11	ENST00000435064.5	2148	17	41	12	0	-3	multi-exon	FALSE	canonical	1	546692	junction_13	145907.96712525672	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	43	1845	45.0	9	True	AGTAAA	-6
PB.9976.19	chr6	+	4682	13	incomplete-splice_match	DAAM2	ENST00000398904.6	6224	25	85384	2	-7522	2	5prime_fragment	FALSE	canonical	1	78969	junction_7	22564.623811246125	NA	2	NA	TRUE	NA	NA	NA	C	coding	613	1842	8	1849	15.0	2989	False	ATTAAA	-21
PB.15.5	chr1	-	2568	16	novel_in_catalog	INTS11	novel	2369	10	NA	NA	1	-3	intron_retention	FALSE	canonical	1	546692	junction_13	146818.655127867	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	762	2318	45.0	2	True	AGTAAA	-6
PB.15.4	chr1	-	2956	15	novel_in_catalog	INTS11	novel	2369	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	546692	junction_11	144840.4005112707	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	1678	2706	45.0	-15	True	AGTAAA	-6
PB.6075.5	chr19	+	2651	14	novel_not_in_catalog	MARK4	novel	553	7	NA	NA	13904	-118961	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	107649.89534537328	NA	1	1	TRUE	NA	NA	NA	B	coding	691	2076	135	2210	10.0	0	True	AATAAA	-21
PB.6075.4	chr19	+	3119	11	novel_in_catalog	MARK4	novel	553	7	NA	NA	13895	-118967	intron_retention	FALSE	canonical	1	230564	junction_1	66808.6631209606	NA	0	NA	TRUE	NA	NA	NA	B	coding	299	900	144	1043	15.0	-9	True	AATAAA	-15
PB.5679.1	chr19	-	3609	10	novel_in_catalog	ZNF558	novel	7032	10	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	35109	junction_9	35202.49181836738	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	825	2033	40.0	-7	True	AATAAA	-24
PB.6075.6	chr19	+	2489	14	novel_not_in_catalog	MARK4	novel	553	7	NA	NA	13904	-118961	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	107649.89534537328	NA	0	NA	TRUE	NA	NA	NA	B	coding	691	2076	135	2210	10.0	0	True	AATAAA	-21
PB.6075.1	chr19	+	3088	12	novel_in_catalog	MARK4	novel	553	7	NA	NA	13841	-118961	intron_retention	FALSE	canonical	1	230564	junction_1	64972.72622041033	NA	0	NA	TRUE	NA	NA	NA	B	coding	463	1392	198	1589	10.0	-4	True	AATAAA	-21
PB.6075.3	chr19	+	2943	13	full-splice_match	PPP1R37	ENST00000221462.8	3163	13	220	0	8	0	multi-exon	FALSE	canonical	1	230564	junction_1	62942.23458121255	NA	0	NA	TRUE	NA	NA	NA	A	coding	691	2076	145	2220	10.0	-10	True	AATAAA	-21
PB.6075.2	chr19	+	2554	13	novel_not_in_catalog	MARK4	novel	553	7	NA	NA	13873	-118961	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	108441.27996204009	NA	0	NA	TRUE	NA	NA	NA	B	coding	727	2184	166	2349	10.0	-31	True	AATAAA	-21
PB.11071.4	chr8	+	2516	3	novel_in_catalog	LEPROTL1	novel	3173	4	NA	NA	-2	64	no_combination_of_known_junctions	FALSE	canonical	1	2801	junction_2	239300.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-12	True	AATAAA	-14
PB.982.4	chr1	-	2251	16	full-splice_match	NCF2	ENST00000367536.5	2203	16	-48	0	-48	0	multi-exon	FALSE	canonical	1	17965	junction_15	171246.31059617022	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	116	1696	25.0	-14	True	AATAAA	-21
PB.5569.7	chr19	+	4362	13	novel_not_in_catalog	DAZAP1	novel	2290	13	NA	NA	194	-2	any annotated donor/acceptor	FALSE	canonical	1	6623	junction_1	610451.3950066138	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	2493	3593	20.0	-9516	False	AATAAA	-21
PB.11068.5	chr8	-	2570	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-14	436	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	230197.19975205496	NA	4	1	TRUE	NA	NA	NA	C	coding	179	540	1108	1647	90.0	-1	True	AAGAAA	-30
PB.7514.1	chr21	+	2437	15	novel_not_in_catalog	MORC3	novel	1028	8	NA	NA	15757	30678	any annotated donor/acceptor	FALSE	canonical	1	5044	junction_13	56730.97332168302	NA	0	NA	TRUE	NA	NA	NA	B	coding	563	1692	162	1853	10.0	-24	False	ATTAAA	-12
PB.10483.2	chr7	+	2812	1	full-splice_match	AC018647.2	ENST00000605778.1	4200	1	-8	1396	-8	-1396	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-30	True	NA	NA
PB.11071.3	chr8	+	2642	4	novel_not_in_catalog	LEPROTL1	novel	3173	4	NA	NA	-2	65	any annotated donor/acceptor	FALSE	canonical	1	5390	junction_2	261275.79772382713	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-12	True	AATAAA	-15
PB.3452.7	chr14	+	5712	3	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	-18	-49	intron_retention	FALSE	canonical	1	16	junction_1	162312.0	NA	6	1	TRUE	NA	NA	NA	B	coding	175	528	359	886	20.0	0	True	NA	NA
PB.3452.6	chr14	+	1622	3	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	7	682	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	162312.0	NA	3	1	TRUE	NA	NA	NA	B	coding	175	528	370	897	20.0	-11	True	ATTAAA	-18
PB.3452.5	chr14	+	2173	3	novel_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	7	1260	combination_of_known_junctions	FALSE	canonical	1	57638	junction_1	133501.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	175	528	343	870	25.0	-11	True	AATAAA	-25
PB.3452.4	chr14	+	2146	2	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	5	-86	intron_retention	FALSE	canonical	1	16	junction_1	0.0	NA	4	1	TRUE	NA	NA	NA	B	coding	179	540	372	911	20.0	-13	True	AATAAA	-18
PB.3452.3	chr14	+	2454	3	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	0	1543	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	162312.0	NA	3	1	TRUE	NA	NA	NA	B	coding	175	528	341	868	20.0	18	True	ATTAAA	-15
PB.3452.2	chr14	+	2180	3	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	-9	1260	any annotated donor/acceptor	FALSE	canonical	1	16	junction_1	162312.0	NA	3	1	TRUE	NA	NA	NA	B	coding	175	528	350	877	25.0	9	True	AATAAA	-25
PB.3452.1	chr14	+	3051	2	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	0	-1585	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-18	True	NA	NA
PB.1867.1	chr11	-	2075	1	novel_in_catalog	BDNF	novel	3979	2	NA	NA	14325	-28375	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	151	456	30	485	65.0	NA	False	NA	NA
PB.11071.1	chr8	+	4170	4	full-splice_match	LEPROTL1	ENST00000321250.12	3173	4	9	-1006	-3	1006	multi-exon	FALSE	canonical	1	481401	junction_1	57114.59229965277	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	107	502	40.0	-13	True	NA	NA
PB.9128.2	chr5	+	3155	2	incomplete-splice_match	NDUFS6	ENST00000469176.1	550	3	-8	9367	7	3053	3prime_fragment	FALSE	canonical	1	2915538	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.3452.9	chr14	+	5740	3	novel_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	12	0	intron_retention	FALSE	canonical	1	57638	junction_1	133501.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	175	528	338	865	30.0	-6	True	GATAAA	-21
PB.3452.8	chr14	+	2396	3	novel_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	-1	1511	combination_of_known_junctions	FALSE	canonical	1	57638	junction_1	133501.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	175	528	315	842	35.0	17	True	AATAAA	-15
PB.7514.2	chr21	+	2280	14	full-splice_match	CHAF1B	ENST00000314103.5	4480	14	10	2190	10	-2190	multi-exon	FALSE	canonical	1	76849	junction_4	41743.79108421802	NA	0	NA	TRUE	NA	NA	NA	A	coding	559	1680	142	1821	10.0	-4	True	ATTAAA	-11
PB.7317.1	chr20	+	809	6	full-splice_match	UBE2C	ENST00000356455.8	850	6	35	6	-24	-2	multi-exon	FALSE	canonical	1	588519	junction_3	516045.4413219828	NA	0	NA	TRUE	NA	NA	NA	A	coding	179	540	86	625	25.0	0	True	AATAAA	-20
PB.8276.11	chr3	+	3394	9	novel_not_in_catalog	NXPE3	novel	797	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	6629	junction_1	66532.77957142629	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	844	2523	10.0	-6131	False	TATAAA	-22
PB.5679.7	chr19	-	2849	9	novel_not_in_catalog	ZNF558	novel	7032	10	NA	NA	3	-5841	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	33183.90334159583	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	938	1396	40.0	2	True	NA	NA
PB.11612.2	chr9	+	8369	37	incomplete-splice_match	VPS13A	ENST00000645632.1	10086	69	118229	-2182	2271	-3	5prime_fragment	TRUE	canonical	1	52228	junction_36	61440.49288154357	NA	1	NA	TRUE	NA	NA	NA	C	coding	1825	5478	3	5480	30.0	NA	False	AATAAA	-13
PB.7905.2	chr3	-	2146	9	full-splice_match	SUMF1	ENST00000272902.9	2159	9	12	1	0	-1	multi-exon	FALSE	canonical	1	245191	junction_1	28243.648869037796	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	25	1149	15.0	-17	True	NA	NA
PB.5358.1	chr18	+	2050	10	novel_in_catalog	CLUL1	novel	574	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	5490	junction_2	6996.940137227888	NA	0	NA	TRUE	NA	NA	NA	A	coding	477	1434	227	1660	55.0	18	True	AATATA	-19
PB.10898.6	chr7	-	3839	10	novel_not_in_catalog	TCAF1	novel	5733	9	NA	NA	-20	740	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	108295.34064096761	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	230	2662	80.0	0	True	NA	NA
PB.11320.3	chr8	+	2078	1	novel_in_catalog	ZHX2	novel	4624	4	NA	NA	25864	-142674	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.11320.2	chr8	+	4510	5	novel_not_in_catalog	ZHX2	novel	4624	4	NA	NA	252	-17	any annotated donor/acceptor	FALSE	canonical	1	15804	junction_2	54023.03927955183	NA	2	NA	TRUE	NA	NA	NA	C	coding	837	2514	739	3252	35.0	-9	True	AATAAA	-9
PB.11320.1	chr8	+	4173	4	full-splice_match	ZHX2	ENST00000314393.5	4624	4	455	-4	455	4	multi-exon	FALSE	canonical	1	75196	junction_2	29622.181523686304	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	381	2894	10.0	-774	False	AATAAA	-30
PB.6862.20	chr2	+	2172	11	novel_not_in_catalog	HNRNPA3	novel	2067	11	NA	NA	14	-893	any annotated donor/acceptor	FALSE	canonical	1	811	junction_3	161993.3641401709	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	15	1151	60.0	-8	False	NA	NA
PB.6862.21	chr2	+	2998	10	novel_in_catalog	HNRNPA3	novel	2067	11	NA	NA	15	1296	combination_of_known_junctions	FALSE	canonical	1	811	junction_3	192938.93157399207	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	14	1009	20.0	-7	False	AATAAA	-23
PB.6862.22	chr2	+	2147	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	227	-307	18	307	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	11	1147	35.0	-4	False	AATATA	-18
PB.6834.5	chr2	-	2506	18	full-splice_match	SLC25A12	ENST00000422440.6	2979	18	12	461	4	1	multi-exon	FALSE	canonical	1	158172	junction_17	57265.316571262585	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	27	2063	20.0	3	True	AATAAA	-14
PB.11127.6	chr8	-	4248	7	novel_not_in_catalog	PCMTD1	novel	3697	4	NA	NA	-18	-4	any annotated donor/acceptor	FALSE	canonical	1	1326	junction_1	149134.88936241207	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	298	1014	15.0	-21	True	AATAAA	-17
PB.3461.13	chr14	-	4111	18	full-splice_match	EXOC5	ENST00000621441.4	10589	18	120	6358	11	-71	multi-exon	FALSE	canonical	1	22011	junction_3	120670.05650546096	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	241	2367	85.0	1	True	NA	NA
PB.3461.12	chr14	-	3922	17	full-splice_match	EXOC5	ENST00000340918.11	2632	17	5	-1295	5	-71	multi-exon	FALSE	canonical	1	7930	junction_14	123221.69267800858	NA	1	NA	TRUE	NA	NA	NA	C	coding	643	1932	247	2178	85.0	-5	True	NA	NA
PB.3461.15	chr14	-	3885	18	novel_not_in_catalog	EXOC5	novel	10589	18	NA	NA	-108	-71	any annotated donor/acceptor	FALSE	canonical	1	10446	junction_17	124994.81996940271	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	180	2141	85.0	341	False	NA	NA
PB.10763.2	chr7	+	4573	1	novel_in_catalog	PSMC2	novel	682	6	NA	NA	-70	-9843	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.11127.7	chr8	-	3966	5	novel_in_catalog	PCMTD1	novel	3697	4	NA	NA	-27	-5	no_combination_of_known_junctions	FALSE	canonical	1	2639	junction_3	139122.2265590585	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	691	1200	20.0	-28	True	AATAAA	-16
PB.11972.4	chrX	+	2854	1	novel_in_catalog	RAB9A	novel	2039	3	NA	NA	8	-16831	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	3	True	NA	NA
PB.11972.5	chrX	+	1258	2	full-splice_match	RAB9A	ENST00000618931.2	737	2	-52	-469	9	469	multi-exon	FALSE	canonical	1	94641	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	182	787	30.0	4	True	ATTAAA	-23
PB.11972.6	chrX	+	1727	3	full-splice_match	RAB9A	ENST00000464506.1	2039	3	12	300	12	-300	multi-exon	FALSE	canonical	1	225940	junction_1	66834.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	268	873	25.0	7	True	NA	NA
PB.11972.7	chrX	+	2507	1	novel_in_catalog	RAB9A	novel	2039	3	NA	NA	-9	-17159	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	22	True	NA	NA
PB.11972.1	chrX	+	1201	3	full-splice_match	RAB9A	ENST00000464506.1	2039	3	-6	844	-6	308	multi-exon	FALSE	canonical	1	225940	junction_1	66834.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	286	891	35.0	-11	True	AATAAA	-44
PB.11972.2	chrX	+	1103	2	full-splice_match	RAB9A	ENST00000618931.2	737	2	-58	-308	3	308	multi-exon	FALSE	canonical	1	94641	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	188	793	35.0	-2	True	AATAAA	-44
PB.11972.3	chrX	+	1350	3	full-splice_match	RAB9A	ENST00000464506.1	2039	3	6	683	6	469	multi-exon	FALSE	canonical	1	225940	junction_1	66834.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	274	879	30.0	1	True	ATTAAA	-23
PB.9283.1	chr5	+	1968	16	novel_in_catalog	MCCC2	novel	1128	11	NA	NA	58	-3	combination_of_known_junctions	FALSE	canonical	1	117160	junction_6	140577.28660918164	NA	1	1	TRUE	NA	NA	NA	C	coding	525	1578	39	1616	20.0	2	True	TATAAA	-16
PB.9283.3	chr5	+	3424	15	novel_in_catalog	MCCC2	novel	1128	11	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	263	junction_5	236278.03374336907	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	909	1583	30.0	-7	True	AATAAA	-12
PB.9283.2	chr5	+	1789	10	incomplete-splice_match	MCCC2	ENST00000509358.6	1214	11	-33	5214	0	-804	3prime_fragment	FALSE	canonical	1	329348	junction_6	110643.0369863172	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	130	1203	70.0	-9	True	NA	NA
PB.2970.9	chr12	-	4606	18	novel_not_in_catalog	KDM2B	novel	5224	23	NA	NA	-40	-91	intron_retention	FALSE	canonical	1	310	junction_15	113356.38503041031	NA	2	NA	TRUE	NA	NA	NA	C	coding	1000	3003	506	3508	55.0	3722	False	TATAAA	-10
PB.2970.8	chr12	-	4667	18	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	-25	-91	intron_retention	FALSE	canonical	1	3718	junction_17	102118.51365534298	NA	2	1	TRUE	NA	NA	NA	C	coding	1105	3318	252	3569	55.0	2162	False	TATAAA	-10
PB.9283.6	chr5	+	3346	16	novel_in_catalog	MCCC2	novel	1128	11	NA	NA	169	-3	combination_of_known_junctions	FALSE	canonical	1	117160	junction_6	140577.28660918164	NA	2	1	TRUE	NA	NA	NA	C	coding	477	1434	72	1505	30.0	79	False	AATAAA	-12
PB.2970.5	chr12	-	5244	23	full-splice_match	KDM2B	ENST00000377071.8	4595	23	-61	-588	-30	-90	multi-exon	FALSE	canonical	1	8987	junction_22	101507.2886879098	NA	1	NA	TRUE	NA	NA	NA	C	coding	1331	3996	150	4145	50.0	1732	False	TATAAA	-11
PB.2970.4	chr12	-	4317	18	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	1	-91	combination_of_known_junctions	FALSE	canonical	1	41599	junction_1	97745.18787900369	NA	0	NA	TRUE	NA	NA	NA	C	coding	1103	3312	80	3391	55.0	-2	True	TATAAA	-10
PB.5679.5	chr19	-	3830	11	novel_not_in_catalog	ZNF558	novel	7032	10	NA	NA	7	-5	any annotated donor/acceptor	FALSE	canonical	1	3343	junction_5	42092.992729075464	NA	3	NA	TRUE	NA	NA	NA	C	coding	331	996	1265	2260	35.0	6	True	AATAAA	-18
PB.2970.6	chr12	-	5040	23	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	-23	-90	intron_retention	FALSE	canonical	1	18410	junction_22	100751.38615792738	NA	0	NA	TRUE	NA	NA	NA	C	coding	1299	3900	42	3941	50.0	-20	True	TATAAA	-11
PB.10311.1	chr6	-	3233	10	full-splice_match	TAGAP	ENST00000367066.7	3887	10	124	530	-10	139	multi-exon	FALSE	canonical	1	125795	junction_6	25407.72330863974	NA	0	NA	TRUE	NA	NA	NA	A	coding	731	2196	209	2404	30.0	-7	True	AATAAA	-21
PB.2970.3	chr12	-	3596	12	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	3175	-91	intron_retention	FALSE	canonical	1	52616	junction_11	90272.80815834517	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	168	2498	55.0	-1	True	TATAAA	-10
PB.9392.6	chr5	-	985	5	full-splice_match	REEP5	ENST00000379638.8	3326	5	242	2099	-8	99	multi-exon	FALSE	canonical	1	1779737	junction_3	182756.02393679804	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	108	677	10.0	11	False	AATAAA	-16
PB.9392.4	chr5	-	2420	5	full-splice_match	REEP5	ENST00000379638.8	3326	5	224	682	-26	-682	multi-exon	FALSE	canonical	1	1779737	junction_3	182756.02393679804	NA	5	NA	TRUE	NA	NA	NA	C	coding	189	570	126	695	35.0	-7	True	ATTAAA	-8
PB.9392.5	chr5	-	2188	5	full-splice_match	REEP5	ENST00000379638.8	3326	5	300	838	-9	-838	multi-exon	FALSE	canonical	1	1779737	junction_3	182756.02393679804	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	50	619	35.0	-13	True	ATTAAA	-12
PB.9392.2	chr5	-	2946	5	novel_not_in_catalog	REEP5	novel	3326	5	NA	NA	-60	-8	any annotated donor/acceptor	FALSE	canonical	1	7227	junction_4	887787.8483977393	NA	2	NA	TRUE	NA	NA	NA	C	coding	75	228	320	547	30.0	734	False	AATAAA	-30
PB.7821.3	chr22	+	1958	12	novel_in_catalog	XRCC6	novel	2296	13	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	3425	junction_8	553406.2665921882	NA	4	NA	TRUE	NA	NA	NA	C	coding	555	1668	67	1734	15.0	-11	True	AATAAA	-20
PB.9392.1	chr5	-	3100	5	full-splice_match	REEP5	ENST00000379638.8	3326	5	196	30	-54	-30	multi-exon	FALSE	canonical	1	1779737	junction_3	182756.02393679804	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	154	723	45.0	-35	False	AATAAA	-8
PB.9063.5	chr4	-	1706	14	incomplete-splice_match	NEK1	ENST00000512193.5	4430	33	-14	167630	-12	-7815	3prime_fragment	FALSE	canonical	1	77782	junction_13	15586.87891262027	NA	0	NA	TRUE	NA	NA	NA	B	coding	371	1113	593	1705	80.0	7695	False	AAGAAA	-21
PB.1253.1	chr1	+	2558	2	novel_not_in_catalog	OR2T2	novel	3331	3	NA	NA	-3629	19919	any annotated donor/acceptor	FALSE	canonical	1	116	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	B	coding	277	834	388	1221	25.0	-81	False	AATAAA	-41
PB.6512.8	chr2	+	3645	8	novel_in_catalog	ACTR2	novel	3861	9	NA	NA	-16	-2	no_combination_of_known_junctions	FALSE	canonical	1	3063	junction_5	523976.7542727483	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	94	1128	25.0	-14	True	AATAAA	-20
PB.9570.34	chr5	-	5623	1	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	21	3031	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	214	645	4848	5492	60.0	11	True	NA	NA
PB.7514.5	chr21	+	2366	15	novel_not_in_catalog	MORC3	novel	1028	8	NA	NA	15789	32866	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	57118.47170025165	NA	1	NA	TRUE	NA	NA	NA	B	coding	559	1680	130	1809	30.0	8	True	AATAAA	-16
PB.6834.8	chr2	-	2584	19	novel_not_in_catalog	SLC25A12	novel	2979	18	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	744	junction_12	97939.86081976563	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	31	2145	30.0	-1	True	AATAAA	-10
PB.6512.5	chr2	+	5254	2	incomplete-splice_match	ACTR2	ENST00000476840.5	587	4	6	1796	6	-1777	intron_retention	FALSE	canonical	1	1074268	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-37	True	NA	NA
PB.1509.9	chr10	+	3922	13	full-splice_match	BMPR1A	ENST00000372037.7	11255	13	119	7214	119	-4114	multi-exon	FALSE	canonical	1	20	junction_8	14481.431738177685	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	419	2017	20.0	-1	True	AATACA	-16
PB.6512.4	chr2	+	2437	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	72	1352	-8	-245	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	86	1270	60.0	-6	True	AGTAAA	-25
PB.6512.7	chr2	+	2295	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	60	1506	-20	-399	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	98	1282	40.0	-18	True	AATAAA	-17
PB.1080.1	chr1	-	1829	5	full-splice_match	IL10	ENST00000423557.1	1630	5	-200	1	-200	-1	multi-exon	FALSE	canonical	1	18561	junction_4	5286.932776903826	NA	0	NA	TRUE	NA	NA	NA	A	coding	178	537	260	796	15.0	-95	False	AATAAA	-22
PB.2237.11	chr11	+	2679	11	full-splice_match	CEP57	ENST00000325542.9	3178	11	34	465	-3	-463	multi-exon	FALSE	canonical	1	241140	junction_10	97688.35203748704	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	205	1707	35.0	-44	True	AATAAA	-16
PB.2237.10	chr11	+	2191	11	full-splice_match	CEP57	ENST00000325542.9	3178	11	24	963	-13	187	multi-exon	FALSE	canonical	1	241140	junction_10	97688.35203748704	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	215	1717	15.0	-54	True	ATTAAA	-19
PB.2237.13	chr11	+	2092	10	full-splice_match	CEP57	ENST00000325486.9	3098	10	45	961	-7	187	multi-exon	FALSE	canonical	1	22215	junction_7	145537.70039714413	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	194	1618	15.0	-33	True	ATTAAA	-19
PB.2237.12	chr11	+	4471	10	novel_not_in_catalog	CEP57	novel	1647	11	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	7332	junction_6	139667.59986994872	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	2328	3041	20.0	-42	True	ATTAAA	-14
PB.2237.15	chr11	+	2551	10	full-splice_match	CEP57	ENST00000325486.9	3098	10	79	468	7	-468	multi-exon	FALSE	canonical	1	22215	junction_7	145537.70039714413	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	160	1584	45.0	1	True	AATAAA	-11
PB.2237.14	chr11	+	3062	7	full-splice_match	CEP57	ENST00000538658.5	2084	7	-120	-858	6	858	multi-exon	FALSE	canonical	1	259422	junction_2	92625.21541270497	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	161	973	100.0	0	True	NA	NA
PB.6512.1	chr2	+	3674	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	185	2	101	-2	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	138	1157	25.0	-190	False	AATAAA	-20
PB.9328.1	chr5	+	2284	10	novel_not_in_catalog	ATP6AP1L	novel	2503	10	NA	NA	-799	26	any annotated donor/acceptor	FALSE	canonical	1	13068	junction_7	13956.026551676916	NA	3	NA	TRUE	NA	NA	NA	A	coding	325	978	1201	2178	85.0	-2	True	NA	NA
PB.6512.2	chr2	+	1627	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	73	2161	-7	337	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	85	1269	70.0	-5	True	NA	NA
PB.9474.2	chr5	-	1809	14	full-splice_match	CDC25C	ENST00000323760.10	2128	14	9	310	9	-2	multi-exon	FALSE	canonical	1	40268	junction_13	21330.075220200426	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	271	1692	35.0	6514	False	ATTAAA	-18
PB.7236.2	chr20	+	4064	22	full-splice_match	DNMT3B	ENST00000353855.6	4237	22	174	-1	2	1	multi-exon	FALSE	canonical	1	80722	junction_9	110182.75602026946	NA	1	NA	TRUE	NA	NA	NA	C	coding	833	2502	109	2610	15.0	213	False	ATTAAA	-17
PB.7236.1	chr20	+	4082	20	full-splice_match	DNMT3B	ENST00000348286.6	4048	20	-39	5	0	-5	multi-exon	FALSE	canonical	1	80722	junction_9	127457.17384171615	NA	6	1	TRUE	NA	NA	NA	C	coding	770	2313	322	2634	20.0	0	True	ATTAAA	-11
PB.8025.2	chr3	+	3921	20	novel_in_catalog	WDR48	novel	3707	19	NA	NA	-2	2	combination_of_known_junctions	TRUE	canonical	1	12085	junction_19	78142.11606076644	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	31	2064	35.0	-20	True	AATAAA	-19
PB.11156.18	chr8	+	4901	6	full-splice_match	YTHDF3	ENST00000621413.4	2370	6	-30	-2501	10	11	multi-exon	FALSE	canonical	1	18908	junction_2	189854.97158304811	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	385	2151	40.0	-12	True	AATAAA	-18
PB.6403.1	chr2	+	1939	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	6	10004	6	724	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	241	975	20.0	6	True	AATAAA	-35
PB.10898.3	chr7	-	4213	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	0	826	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	111863.6840754742	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	185	2950	80.0	2464	False	NA	NA
PB.6403.6	chr2	+	1002	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	-6	10953	-6	-225	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	253	987	50.0	-6	True	NA	NA
PB.5815.2	chr19	+	2963	9	novel_in_catalog	AC010463.1	novel	1207	10	NA	NA	14449	4680	no_combination_of_known_junctions	FALSE	canonical	1	791	junction_1	36153.45900787883	NA	0	NA	TRUE	NA	NA	NA	B	coding	604	1815	55	1869	20.0	-34	True	NA	NA
PB.3751.2	chr15	-	3201	1	novel_in_catalog	EMC7	novel	1155	5	NA	NA	-22	1985	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	3	True	NA	NA
PB.3751.1	chr15	-	1066	5	full-splice_match	EMC7	ENST00000256545.8	1155	5	86	3	-35	-3	multi-exon	FALSE	canonical	1	755611	junction_4	205899.15879927727	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	24	752	20.0	-10	True	ATTAAA	-20
PB.5815.1	chr19	+	3024	9	full-splice_match	ANKLE1	ENST00000394458.7	3218	9	199	-5	-33	5	multi-exon	FALSE	canonical	1	17950	junction_1	33723.30802186375	NA	1	NA	TRUE	NA	NA	NA	A	coding	615	1848	78	1925	15.0	-216	False	NA	NA
PB.4543.10	chr16	+	2881	20	novel_in_catalog	DHX38	novel	4608	27	NA	NA	-648	0	combination_of_known_junctions	FALSE	canonical	1	24168	junction_19	138007.78288619607	NA	0	NA	TRUE	NA	NA	NA	C	coding	846	2541	30	2570	35.0	-7949	False	AATAAA	-13
PB.11790.18	chr9	+	3203	18	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-5	0	intron_retention	FALSE	canonical	1	4700	junction_1	86057.05541362468	NA	0	NA	TRUE	NA	NA	NA	C	coding	972	2916	286	3201	80.0	-2	True	NA	NA
PB.4543.12	chr16	+	1941	12	incomplete-splice_match	DHX38	ENST00000268482.7	4608	27	11463	9	539	0	5prime_fragment	FALSE	canonical	1	311450	junction_11	89759.20206662024	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	90	1535	35.0	-7204	False	AATAAA	-13
PB.6403.5	chr2	+	3246	7	novel_not_in_catalog	YIPF4	novel	11949	6	NA	NA	-8	1351	any annotated donor/acceptor	FALSE	canonical	1	14	junction_6	174695.17033074753	NA	9	NA	TRUE	NA	NA	NA	C	coding	244	735	255	989	75.0	-8	True	NA	NA
PB.6708.2	chr2	+	3328	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	41	427	41	-418	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	88	2100	55.0	-21	True	ATTAAA	-18
PB.6708.3	chr2	+	2997	1	novel_in_catalog	DDX18	novel	3796	14	NA	NA	32	-5102	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-30	True	NA	NA
PB.6708.6	chr2	+	2905	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	37	854	37	-845	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	92	2104	30.0	-25	True	NA	NA
PB.5552.1	chr19	+	2211	9	full-splice_match	ARID3A	ENST00000263620.7	5941	9	0	3730	0	149	multi-exon	FALSE	canonical	1	7918	junction_1	105520.03001911237	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	291	2072	80.0	2	True	NA	NA
PB.6708.4	chr2	+	3761	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	33	2	33	-2	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	96	2108	15.0	-29	True	NA	NA
PB.6708.5	chr2	+	3140	14	full-splice_match	DDX18	ENST00000263239.6	3796	14	33	623	33	-614	multi-exon	FALSE	canonical	1	151172	junction_12	119161.28762560313	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	96	2108	75.0	-29	True	AATACA	-34
PB.11468.1	chr9	-	2416	1	incomplete-splice_match	BNC2	ENST00000380672.8	12844	7	458787	1	24453	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	ATTAAA	-17
PB.6708.8	chr2	+	3699	14	novel_in_catalog	DDX18	novel	3796	14	NA	NA	39	-1	combination_of_known_junctions	FALSE	canonical	1	5228	junction_8	146639.74148413024	NA	2	1	TRUE	NA	NA	NA	C	coding	651	1956	90	2045	15.0	-23	True	NA	NA
PB.6708.9	chr2	+	3847	15	novel_not_in_catalog	DDX18	novel	3796	14	NA	NA	40	-2	any annotated donor/acceptor	FALSE	canonical	1	11572	junction_7	157697.00950692937	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	89	2194	15.0	-22	True	NA	NA
PB.6403.9	chr2	+	1787	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	-3	10165	-3	563	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	250	984	55.0	-3	True	ATTAAA	-16
PB.5860.7	chr19	+	3726	19	novel_not_in_catalog	MAU2	novel	4994	19	NA	NA	149	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	116444.46005009438	NA	5	2	TRUE	NA	NA	NA	B	coding	421	1266	490	1755	35.0	-15	True	ATTAAA	-13
PB.9944.8	chr6	+	2654	14	novel_not_in_catalog	ZNF76	novel	1476	5	NA	NA	-38	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	90371.45347060947	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	203	1918	10.0	1	True	AATAAA	-15
PB.7208.1	chr20	-	817	3	full-splice_match	CST3	ENST00000376925.7	873	3	47	9	-34	0	multi-exon	FALSE	canonical	1	6934473	junction_1	349880.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	146	441	118	558	5.0	5	True	AATAAA	-15
PB.4896.16	chr17	+	2037	10	novel_in_catalog	AC005899.4	novel	514	5	NA	NA	25691	9635	no_combination_of_known_junctions	FALSE	canonical	1	132187	junction_5	581339.9022949026	NA	0	NA	TRUE	NA	NA	NA	B	coding	447	1344	118	1461	35.0	12	True	AATAAA	-7
PB.9570.31	chr5	-	2536	16	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	0	5	no_combination_of_known_junctions	FALSE	canonical	1	12384	junction_13	599995.708797062	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	106	1779	45.0	-7	True	CATAAA	-10
PB.4524.10	chr16	+	2631	11	novel_in_catalog	WWP2	novel	4515	24	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	1	11140	junction_2	112119.31612688332	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	226	1233	30.0	24	True	NA	NA
PB.4524.11	chr16	+	3416	25	novel_in_catalog	WWP2	novel	4515	24	NA	NA	-3	21	combination_of_known_junctions	FALSE	canonical	1	39604	junction_1	88552.79587709832	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	102	2714	10.0	27	True	TATAAA	-20
PB.3369.15	chr14	-	6397	34	novel_in_catalog	HECTD1	novel	3748	18	NA	NA	11	0	intron_retention	FALSE	canonical	1	102057	junction_33	102665.25540435531	NA	1	NA	TRUE	NA	NA	NA	C	coding	1991	5973	425	6397	75.0	-1	True	NA	NA
PB.6001.4	chr19	-	2985	15	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	11	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	320089.27389004163	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	267	1712	15.0	77	False	AATAAA	-21
PB.6001.5	chr19	-	2880	12	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	-51	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	313874.5342316584	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	78	1337	15.0	-7	True	AATAAA	-21
PB.6001.6	chr19	-	2751	15	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	0	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	320089.27389004163	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	170	1615	15.0	-1	True	AATAAA	-21
PB.6001.7	chr19	-	3016	13	full-splice_match	AKT2	ENST00000391844.8	1795	13	114	-1335	6	0	multi-exon	FALSE	canonical	1	68343	junction_12	282955.82492692454	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	220	1479	20.0	5	True	AATAAA	-15
PB.6001.1	chr19	-	4480	14	full-splice_match	AKT2	ENST00000392038.6	5300	14	30	790	8	-789	multi-exon	FALSE	canonical	1	343874	junction_13	213766.1940238812	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	270	1715	50.0	74	False	AATAAA	-9
PB.6001.2	chr19	-	4199	12	novel_in_catalog	AKT2	novel	5300	14	NA	NA	8	6	intron_retention	FALSE	canonical	1	68343	junction_11	287559.91190864745	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	1679	2656	15.0	74	False	AATAAA	-21
PB.6001.3	chr19	-	3228	14	full-splice_match	AKT2	ENST00000392038.6	5300	14	60	2012	7	6	multi-exon	FALSE	canonical	1	343874	junction_13	213766.1940238812	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	240	1685	15.0	9	True	AATAAA	-21
PB.6001.8	chr19	-	2858	15	novel_not_in_catalog	AKT2	novel	5300	14	NA	NA	11	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	320089.27389004163	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	267	1712	20.0	77	False	AATAAA	-18
PB.9063.3	chr4	-	2379	20	incomplete-splice_match	NEK1	ENST00000510533.5	5377	33	-43	113714	1	46939	3prime_fragment	FALSE	canonical	1	48300	junction_4	24127.66140559518	NA	1	NA	TRUE	NA	NA	NA	B	coding	574	1722	656	2377	65.0	-44	True	NA	NA
PB.9570.32	chr5	-	3093	16	incomplete-splice_match	TNIP1	ENST00000315050.11	2785	18	-28	2483	-20	-382	3prime_fragment	FALSE	canonical	1	144529	junction_15	481785.8605596197	NA	4	NA	TRUE	NA	NA	NA	C	coding	617	1854	139	1992	20.0	8419	False	NA	NA
PB.9419.4	chr5	-	1749	18	full-splice_match	ALDH7A1	ENST00000409134.7	4964	18	199	3016	0	-28	multi-exon	FALSE	canonical	1	41359	junction_11	51639.145729320306	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	22	1641	30.0	-1	True	AATAAA	-19
PB.2040.1	chr11	+	2334	10	full-splice_match	VPS51	ENST00000279281.7	2714	10	228	152	-92	1	multi-exon	FALSE	canonical	1	359299	junction_1	278455.2232214076	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	123	2213	0.0	173	False	AATAAA	-17
PB.2040.3	chr11	+	3120	9	novel_in_catalog	VPS51	novel	723	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	359299	junction_1	281573.5462323465	NA	1	1	TRUE	NA	NA	NA	C	coding	768	2307	93	2399	0.0	-55	False	AATAAA	-17
PB.2040.2	chr11	+	2974	10	novel_in_catalog	VPS51	novel	723	5	NA	NA	-18	1	intron_retention	TRUE	canonical	1	12504	junction_2	412317.6177443732	NA	1	NA	TRUE	NA	NA	NA	C	coding	658	1977	877	2853	0.0	-73	False	AATAAA	-17
PB.2040.4	chr11	+	3107	9	incomplete-splice_match	VPS51	ENST00000279281.7	2714	10	0	152	0	1	intron_retention	FALSE	canonical	1	359299	junction_1	285977.9356021195	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	93	2198	0.0	-55	False	AATAAA	-17
PB.11400.2	chr8	+	2110	13	novel_in_catalog	ADCK5	novel	782	6	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	4682	junction_10	46654.89735182923	NA	3	1	TRUE	NA	NA	NA	C	coding	203	612	428	1039	30.0	-17	True	NA	NA
PB.11400.3	chr8	+	1970	15	full-splice_match	ADCK5	ENST00000308860.10	1949	15	-20	-1	-10	1	multi-exon	FALSE	canonical	1	4682	junction_12	40855.12472738023	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	65	1807	25.0	-15	True	NA	NA
PB.9063.2	chr4	-	5271	33	novel_in_catalog	NEK1	novel	3642	15	NA	NA	-7	-2	no_combination_of_known_junctions	FALSE	canonical	1	15968	junction_8	27546.620304817312	NA	0	NA	TRUE	NA	NA	NA	B	coding	1155	3468	571	4038	30.0	-37	True	ATTAAA	-16
PB.11400.4	chr8	+	2182	12	novel_in_catalog	ADCK5	novel	782	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	4682	junction_9	42372.10590892344	NA	11	1	TRUE	NA	NA	NA	C	coding	325	978	50	1027	30.0	0	True	NA	NA
PB.805.2	chr1	-	3184	4	novel_in_catalog	ASH1L	novel	11942	28	NA	NA	0	1454	combination_of_known_junctions	FALSE	canonical	1	8632	junction_3	83461.60021763835	NA	2	NA	TRUE	NA	NA	NA	B	coding	971	2913	272	3184	55.0	-6	True	GATAAA	-10
PB.519.14	chr1	+	3980	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	55	2086	55	650	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	2	NA	TRUE	NA	NA	NA	C	coding	984	2955	305	3259	45.0	4	True	ATTAAA	-34
PB.10286.1	chr6	+	2363	5	full-splice_match	ARMT1	ENST00000367294.3	2576	5	209	4	10	0	multi-exon	FALSE	canonical	1	307258	junction_2	12155.307996920523	NA	15	NA	TRUE	NA	NA	NA	C	coding	441	1326	51	1376	25.0	6	True	AATAAA	-14
PB.9095.1	chr4	+	2726	2	incomplete-splice_match	SLC25A4	ENST00000491736.1	1666	4	-12	-30	-12	30	intron_retention	FALSE	canonical	1	1280821	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	108	794	20.0	0	True	AATAAA	-15
PB.9131.3	chr5	+	3854	12	novel_not_in_catalog	ICE1	novel	613	11	NA	NA	-17	8338	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	56884.69059712445	NA	3	1	TRUE	NA	NA	NA	C	coding	1129	3387	467	3853	55.0	0	True	AGTAAA	-23
PB.9786.1	chr6	+	5482	37	full-splice_match	CARMIL1	ENST00000329474.6	5431	37	-53	2	-53	-2	multi-exon	FALSE	canonical	1	60036	junction_5	19271.878849215973	NA	4	NA	TRUE	NA	NA	NA	C	coding	1371	4116	422	4537	15.0	-25	True	AATAAA	-17
PB.9786.3	chr6	+	5444	37	novel_not_in_catalog	CARMIL1	novel	1290	9	NA	NA	-33	-2	any annotated donor/acceptor	FALSE	canonical	1	23561	junction_34	23190.950371751947	NA	2	NA	TRUE	NA	NA	NA	C	coding	1365	4098	402	4499	15.0	-5	True	AATAAA	-17
PB.9786.2	chr6	+	2354	23	incomplete-splice_match	CARMIL1	ENST00000329474.6	5431	37	-44	100219	-44	47680	3prime_fragment	FALSE	canonical	1	60036	junction_5	20689.59808176862	NA	1	NA	TRUE	NA	NA	NA	C	coding	647	1941	413	2353	50.0	-16	True	AAAACA	-8
PB.9786.5	chr6	+	2761	12	novel_not_in_catalog	CARMIL1	novel	1290	9	NA	NA	-29	7966	any annotated donor/acceptor	FALSE	canonical	1	639	junction_11	29325.491068013936	NA	5	NA	TRUE	NA	NA	NA	C	coding	337	1014	398	1411	30.0	-1	True	NA	NA
PB.9786.4	chr6	+	2717	1	novel_in_catalog	CARMIL1	novel	1290	9	NA	NA	-29	-170482	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.9786.7	chr6	+	3351	28	incomplete-splice_match	CARMIL1	ENST00000329474.6	5431	37	4	66039	4	-65202	3prime_fragment	FALSE	canonical	1	60036	junction_5	19860.030551146072	NA	1	NA	TRUE	NA	NA	NA	C	coding	905	2718	365	3082	60.0	-5	True	AATAAA	-9
PB.9786.6	chr6	+	3490	29	novel_not_in_catalog	CARMIL1	novel	1290	9	NA	NA	-25	-62484	any annotated donor/acceptor	FALSE	canonical	1	498	junction_23	26897.680953518946	NA	3	NA	TRUE	NA	NA	NA	C	coding	688	2067	394	2460	5.0	3	True	AATAAA	-23
PB.11110.12	chr8	+	3344	22	novel_in_catalog	IKBKB	novel	3938	22	NA	NA	0	-731	combination_of_known_junctions	FALSE	canonical	1	834	junction_21	105506.40373130405	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	171	2435	25.0	0	True	AATAAA	-15
PB.519.13	chr1	+	3197	16	incomplete-splice_match	PKN2	ENST00000370521.7	6121	22	52	21911	52	8076	3prime_fragment	FALSE	canonical	1	161215	junction_1	63039.17403421111	NA	2	NA	TRUE	NA	NA	NA	C	coding	760	2283	308	2590	35.0	1	True	AATAAA	-23
PB.2564.8	chr12	-	3048	18	novel_in_catalog	SLC38A1	novel	8066	17	NA	NA	-4	-53	no_combination_of_known_junctions	FALSE	canonical	1	24685	junction_17	272307.8226488123	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	469	1932	35.0	41	True	TATAAA	-35
PB.2564.9	chr12	-	3201	19	novel_not_in_catalog	SLC38A1	novel	8066	17	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	3526	junction_18	313536.4086707298	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	569	2032	90.0	19	True	NA	NA
PB.2564.6	chr12	-	2934	17	full-splice_match	SLC38A1	ENST00000546893.5	2332	17	109	-711	2	-53	multi-exon	FALSE	canonical	1	252400	junction_16	180867.33016702076	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	355	1818	35.0	32	True	TATAAA	-35
PB.5057.1	chr17	+	2341	1	full-splice_match	DND1P1	ENST00000580842.1	1059	1	-788	-494	-788	494	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	311	936	912	1847	100.0	1406	False	ATTAAA	-13
PB.2564.4	chr12	-	3409	18	full-splice_match	SLC38A1	ENST00000439706.5	3436	18	-27	54	-12	-54	multi-exon	FALSE	canonical	1	19712	junction_17	273056.418710005	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	834	2294	35.0	18	True	TATAAA	-34
PB.2564.5	chr12	-	2941	17	full-splice_match	SLC38A1	ENST00000398637.9	8066	17	334	4791	128	-53	multi-exon	FALSE	canonical	1	233335	junction_16	184336.38072077464	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	362	1825	35.0	2	True	TATAAA	-35
PB.2564.2	chr12	-	2975	1	incomplete-splice_match	SLC38A1	ENST00000398637.9	8066	17	82968	7	11977	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	3000	False	ATTAAA	-12
PB.2564.3	chr12	-	2329	1	genic	SLC38A1	novel	NA	NA	NA	NA	12633	3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3656	False	ATTAAA	-22
PB.257.9	chr1	+	1982	13	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	19	-10	combination_of_known_junctions	FALSE	canonical	1	8944	junction_1	482133.4244855244	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	142	1401	10.0	1	True	AATAAA	-16
PB.11156.16	chr8	+	2966	5	novel_not_in_catalog	YTHDF3	novel	5193	6	NA	NA	1	578	any annotated donor/acceptor	FALSE	canonical	1	31217	junction_1	163402.74807569027	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	323	1927	20.0	-21	True	ATTAAA	-14
PB.8621.6	chr3	-	4780	6	full-splice_match	RNF168	ENST00000318037.3	5347	6	-13	580	-13	-580	multi-exon	FALSE	canonical	1	190501	junction_2	13274.365596893887	NA	2	NA	TRUE	NA	NA	NA	C	coding	571	1716	609	2324	25.0	-14	True	TATAAA	-22
PB.8621.7	chr3	-	1756	6	full-splice_match	RNF168	ENST00000318037.3	5347	6	-3	3594	-3	-617	multi-exon	FALSE	canonical	1	190501	junction_2	13274.365596893887	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1158	599	1756	70.0	-4	True	AATGAA	-34
PB.7411.5	chr20	+	1329	7	full-splice_match	BIRC7	ENST00000217169.7	1368	7	22	17	22	-5	multi-exon	FALSE	canonical	1	8423	junction_5	6818.722061761687	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	193	1089	20.0	-28	True	AATAAA	-16
PB.8621.5	chr3	-	4899	6	full-splice_match	RNF168	ENST00000318037.3	5347	6	-6	454	-6	-454	multi-exon	FALSE	canonical	1	190501	junction_2	13274.365596893887	NA	3	NA	TRUE	NA	NA	NA	C	coding	571	1716	602	2317	40.0	-7	True	AATAAA	-27
PB.8621.2	chr3	-	5214	7	novel_not_in_catalog	RNF168	novel	5347	6	NA	NA	20	-118	any annotated donor/acceptor	FALSE	canonical	1	1658	junction_3	93697.98292993766	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	1400	2296	5.0	-4	True	AATAAA	-20
PB.8621.1	chr3	-	5319	6	full-splice_match	RNF168	ENST00000318037.3	5347	6	-93	121	-93	-121	multi-exon	FALSE	canonical	1	190501	junction_2	13274.365596893887	NA	3	NA	TRUE	NA	NA	NA	C	coding	571	1716	689	2404	10.0	-28	False	AATAAA	-17
PB.6594.13	chr2	+	3641	7	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1071348	junction_3	493211.12801855284	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	121	924	15.0	0	True	AATAAA	-19
PB.6594.12	chr2	+	3798	6	novel_in_catalog	MAT2A	novel	2819	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1210558	junction_2	438069.42922345083	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	740	1558	20.0	0	True	AATAAA	-18
PB.8429.1	chr3	+	2599	8	full-splice_match	MRPS22	ENST00000310776.8	1120	8	-11	-1468	-11	1288	multi-exon	TRUE	canonical	1	464981	junction_1	112078.2423917892	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	20	1102	75.0	-12	True	NA	NA
PB.8429.2	chr3	+	4668	6	novel_in_catalog	MRPS22	novel	1547	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	464981	junction_1	122388.21220362687	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	15	671	35.0	-7	True	AATACA	-11
PB.8429.3	chr3	+	1130	8	full-splice_match	MRPS22	ENST00000310776.8	1120	8	-5	-5	-5	2	multi-exon	FALSE	canonical	1	464981	junction_1	112078.2423917892	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	14	1096	20.0	-6	True	AATACA	-17
PB.257.2	chr1	+	3494	13	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	10	-10	intron_retention	FALSE	canonical	1	717714	junction_4	320951.2468281679	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	2197	2913	10.0	-8	True	AATAAA	-16
PB.10400.5	chr7	+	1933	4	full-splice_match	C1GALT1	ENST00000436587.6	6235	4	6	4296	-4	-4296	multi-exon	FALSE	canonical	1	124257	junction_2	17387.995533317426	NA	3	NA	TRUE	NA	NA	NA	C	coding	363	1092	218	1309	25.0	-38	True	AATAAA	-19
PB.257.3	chr1	+	2164	15	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	1	3840	junction_5	530481.5887548188	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	706	1575	10.0	-7	True	AATAAA	-24
PB.8998.2	chr4	+	4521	9	novel_in_catalog	ELMOD2	novel	4409	9	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	1	8557	junction_1	70386.99765537311	NA	2	1	TRUE	NA	NA	NA	C	coding	269	810	315	1124	20.0	214	False	AATAAA	-20
PB.10400.4	chr7	+	4829	4	full-splice_match	C1GALT1	ENST00000436587.6	6235	4	-61	1467	7	-1467	multi-exon	FALSE	canonical	1	124257	junction_2	17387.995533317426	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	285	1376	80.0	10	True	AATAAA	-3
PB.10400.7	chr7	+	1545	4	full-splice_match	C1GALT1	ENST00000436587.6	6235	4	-7	4697	-7	-4697	multi-exon	FALSE	canonical	1	124257	junction_2	17387.995533317426	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	231	1322	30.0	-51	True	NA	NA
PB.126.2	chr1	-	3290	16	full-splice_match	PADI2	ENST00000375486.8	4345	16	-18	1073	-18	-48	multi-exon	FALSE	canonical	1	107906	junction_15	30684.24937643995	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	83	2080	35.0	-3	True	AATAAA	-15
PB.3681.12	chr14	+	1830	11	novel_in_catalog	EIF5	novel	521	3	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	19685	junction_1	739178.956427799	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	233	1528	10.0	0	True	AATAAA	-18
PB.11110.11	chr8	+	3675	21	novel_not_in_catalog	IKBKB	novel	3938	22	NA	NA	0	-2	intron_retention	FALSE	canonical	1	7497	junction_14	107522.04189898692	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	171	1538	5.0	0	True	NA	NA
PB.126.1	chr1	-	4372	16	full-splice_match	PADI2	ENST00000375486.8	4345	16	-28	1	-28	-1	multi-exon	FALSE	canonical	1	107906	junction_15	30684.24937643995	NA	3	NA	TRUE	NA	NA	NA	C	coding	665	1998	93	2090	15.0	4116	False	AATAAA	-18
PB.3033.10	chr12	+	2504	6	novel_in_catalog	ZNF140	novel	3550	5	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	11412	junction_3	28264.728736713536	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	571	1635	70.0	-2	True	AATAAA	-19
PB.12277.7	chrX	-	2652	10	novel_in_catalog	FAM122B	novel	4246	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	5370	junction_9	168975.50363716067	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	266	934	30.0	10	False	AATAAA	-24
PB.12277.6	chrX	-	3369	9	novel_not_in_catalog	FAM122B	novel	4246	9	NA	NA	15	0	intron_retention	FALSE	canonical	1	31461	junction_7	166377.41607111224	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	968	1651	30.0	31	True	AATAAA	-24
PB.12277.4	chrX	-	3493	10	novel_in_catalog	FAM122B	novel	4246	9	NA	NA	-12	0	intron_retention	FALSE	canonical	1	14666	junction_1	144811.0598439767	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	963	1775	30.0	36	True	AATAAA	-24
PB.12277.3	chrX	-	3597	10	novel_in_catalog	FAM122B	novel	4246	9	NA	NA	-19	0	intron_retention	FALSE	canonical	1	5370	junction_9	151867.12942504205	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	282	1025	30.0	-6	True	AATAAA	-24
PB.12277.2	chrX	-	3611	11	full-splice_match	FAM122B	ENST00000611027.2	1059	11	-18	-2534	-18	0	multi-exon	FALSE	canonical	1	5370	junction_10	156832.3323943121	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	236	1039	30.0	-2	True	AATAAA	-24
PB.12277.1	chrX	-	4376	10	full-splice_match	FAM122B	ENST00000343004.9	4326	10	-50	0	-18	0	multi-exon	FALSE	canonical	1	116804	junction_8	129455.368029504	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	1001	1804	30.0	-2	True	AATAAA	-24
PB.3624.8	chr14	+	6586	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	26	6423	-9	4476	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	260	2608	25.0	-21	True	NA	NA
PB.3624.9	chr14	+	5678	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	30	7327	-5	3572	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2349	256	2604	30.0	-17	True	NA	NA
PB.3624.6	chr14	+	3472	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	32	9531	-3	1368	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	254	2602	5.0	-15	True	ATTAAA	-19
PB.3624.7	chr14	+	2929	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	24	10082	-11	817	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	262	2610	40.0	-23	True	AATAAA	-21
PB.3624.5	chr14	+	4249	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	32	8754	-3	2145	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2349	254	2602	45.0	-15	True	GATAAA	-18
PB.3624.2	chr14	+	5076	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	13	7946	13	2953	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	2	NA	TRUE	NA	NA	NA	C	coding	782	2349	273	2621	25.0	-34	False	NA	NA
PB.3624.3	chr14	+	3696	16	full-splice_match	CPSF2	ENST00000298875.8	13035	16	23	9316	-12	1583	multi-exon	FALSE	canonical	1	250220	junction_1	117988.20110890562	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	263	2611	35.0	-24	True	AATATA	-42
PB.11156.12	chr8	+	2928	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	90	2145	-9	474	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	236	1993	10.0	0	True	AATAAA	-23
PB.2859.12	chr12	+	2878	25	full-splice_match	WASHC4	ENST00000311317.8	2897	25	19	0	18	0	multi-exon	FALSE	canonical	1	13528	junction_24	81141.1237649048	NA	3	NA	TRUE	NA	NA	NA	C	coding	851	2556	69	2624	90.0	2	True	NA	NA
PB.1163.1	chr1	+	899	4	full-splice_match	H3F3A	ENST00000366815.7	1088	4	38	151	2	-151	multi-exon	TRUE	canonical	1	1858	junction_3	1957.498460337127	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	120	530	25.0	0	True	AGTAAA	-20
PB.1163.2	chr1	+	1046	4	full-splice_match	H3F3A	ENST00000366815.7	1088	4	43	-1	7	-1	multi-exon	FALSE	canonical	1	1858	junction_3	1957.498460337127	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	115	525	10.0	5	True	ATTAAA	-14
PB.8238.3	chr3	-	3126	7	novel_not_in_catalog	AC068756.1	novel	403	3	NA	NA	18553	158451	any annotated donor/acceptor	FALSE	canonical	1	31	junction_4	2454.3228303455835	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-35	False	AATAAA	-13
PB.12267.1	chrX	-	1515	4	full-splice_match	FIRRE	ENST00000650184.1	1805	4	-30	320	9	-320	multi-exon	FALSE	canonical	1	13705	junction_1	19727.700598115556	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	756	1424	90.0	8	False	AATAAA	-15
PB.12267.2	chrX	-	1971	2	incomplete-splice_match	FIRRE	ENST00000650184.1	1805	4	-54	28712	-15	-28712	3prime_fragment	FALSE	canonical	1	58842	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	-16	False	AAGAAA	-5
PB.8196.16	chr3	+	2663	7	incomplete-splice_match	FLNB	ENST00000493452.5	7402	44	76459	-1470	178	-4	5prime_fragment	FALSE	canonical	1	885898	junction_6	258935.61060087892	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	246	1178	15.0	NA	False	AATAAA	-13
PB.8196.14	chr3	+	3052	9	incomplete-splice_match	FLNB	ENST00000493452.5	7402	44	71775	-1471	123	-3	5prime_fragment	FALSE	canonical	1	885898	junction_8	230404.4940482051	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	142	1566	15.0	NA	False	AATAAA	-14
PB.6024.12	chr19	+	3751	29	novel_not_in_catalog	ARHGEF1	novel	3243	29	NA	NA	3171	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	286133.8015831822	NA	3	1	TRUE	NA	NA	NA	C	coding	555	1668	1718	3385	10.0	0	True	AATATA	-17
PB.6024.11	chr19	+	3261	29	full-splice_match	ARHGEF1	ENST00000337665.8	3171	29	-99	9	-21	2	multi-exon	FALSE	canonical	1	124968	junction_1	268286.3732488556	NA	2	NA	TRUE	NA	NA	NA	C	coding	927	2784	120	2903	30.0	-3713	False	AATATA	-9
PB.6024.10	chr19	+	3526	30	novel_not_in_catalog	ARHGEF1	novel	3243	29	NA	NA	-104	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_13	305596.4951532573	NA	3	1	TRUE	NA	NA	NA	C	coding	555	1668	1501	3168	30.0	-6	True	AATATA	-9
PB.3591.9	chr14	-	6724	12	full-splice_match	SPTLC2	ENST00000216484.6	8170	12	94	1352	94	-1352	multi-exon	FALSE	canonical	1	191064	junction_11	71037.92886041132	NA	4	NA	TRUE	NA	NA	NA	C	coding	562	1689	101	1789	80.0	-43	True	NA	NA
PB.3591.8	chr14	-	7807	12	full-splice_match	SPTLC2	ENST00000216484.6	8170	12	124	239	124	-239	multi-exon	FALSE	canonical	1	191064	junction_11	71037.92886041132	NA	57	3	TRUE	NA	NA	NA	C	coding	562	1689	71	1759	35.0	-13	True	AATAAA	-14
PB.2594.5	chr12	+	3324	25	novel_in_catalog	PRPF40B	novel	531	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	14630	junction_1	45558.36866041478	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	22	1905	15.0	9	True	TTTAAA	-23
PB.2594.4	chr12	+	2441	24	novel_in_catalog	PRPF40B	novel	531	3	NA	NA	-9	-93	combination_of_known_junctions	FALSE	canonical	1	14630	junction_1	42084.308750838674	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2409	31	2439	75.0	0	True	AAGAAA	-3
PB.2594.3	chr12	+	3185	26	full-splice_match	PRPF40B	ENST00000548825.6	3307	26	122	0	-12	0	multi-exon	TRUE	canonical	1	14630	junction_1	45150.451261071576	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	34	2712	15.0	-3	True	TTTAAA	-20
PB.433.1	chr1	-	4240	9	full-splice_match	DHCR24	ENST00000371269.8	4227	9	-8	-5	-8	-1	multi-exon	FALSE	canonical	1	1644710	junction_4	156953.3882598091	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	85	1635	0.0	26	False	AATAAA	-18
PB.342.1	chr1	+	3433	12	novel_not_in_catalog	ERMAP	novel	3476	12	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	36834.29912571494	NA	1	NA	TRUE	NA	NA	NA	A	coding	473	1422	256	1677	15.0	-1	True	AATAAA	-19
PB.9029.3	chr4	-	3050	7	full-splice_match	TMEM154	ENST00000304385.7	10698	7	165	7483	12	2134	multi-exon	FALSE	canonical	1	89565	junction_6	86707.34931061047	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	68	619	30.0	-4	True	NA	NA
PB.9029.2	chr4	-	3114	7	novel_not_in_catalog	TMEM154	novel	10698	7	NA	NA	-3	2134	any annotated donor/acceptor	FALSE	canonical	1	11058	junction_6	110115.5230075316	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	366	683	30.0	-19	True	NA	NA
PB.9029.1	chr4	-	5921	8	novel_not_in_catalog	TMEM154	novel	10698	7	NA	NA	-3	-3663	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	114397.3060967962	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	83	634	30.0	-19	True	AATAAA	-18
PB.9029.7	chr4	-	2309	7	full-splice_match	TMEM154	ENST00000304385.7	10698	7	175	8214	22	1403	multi-exon	FALSE	canonical	1	89565	junction_6	86707.34931061047	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	58	609	15.0	6	True	NA	NA
PB.9029.6	chr4	-	2514	4	novel_not_in_catalog	TMEM154	novel	10698	7	NA	NA	-2073	1930	any annotated donor/acceptor	FALSE	canonical	1	7421	junction_3	99370.72958147965	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-9	False	TTTAAA	-35
PB.9029.5	chr4	-	2910	7	novel_not_in_catalog	TMEM154	novel	10698	7	NA	NA	-3	1930	any annotated donor/acceptor	FALSE	canonical	1	11058	junction_6	110115.5230075316	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	366	683	80.0	-19	True	TTTAAA	-35
PB.9029.4	chr4	-	2813	7	full-splice_match	TMEM154	ENST00000304385.7	10698	7	198	7687	45	1930	multi-exon	FALSE	canonical	1	89565	junction_6	86707.34931061047	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	35	586	80.0	-2	True	TTTAAA	-35
PB.4861.8	chr17	-	2794	5	full-splice_match	FAM222B	ENST00000583307.5	886	5	-57	-1851	0	0	multi-exon	FALSE	canonical	1	5631	junction_3	63135.64146739938	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	226	1914	70.0	-2	True	ATTAAA	-7
PB.4861.9	chr17	-	2760	3	novel_in_catalog	FAM222B	novel	4033	3	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	37066	junction_1	4602.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	576	1880	70.0	-57	True	ATTAAA	-7
PB.6599.1	chr2	-	2874	4	full-splice_match	C2orf68	ENST00000306336.5	2837	4	-39	2	-2	-2	multi-exon	FALSE	canonical	1	205381	junction_2	84144.29331808545	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	85	585	25.0	-37	True	ATTAAA	-16
PB.3355.1	chr14	-	2289	7	full-splice_match	CIDEB	ENST00000258807.5	2294	7	3	2	3	-2	multi-exon	TRUE	canonical	1	52993	junction_6	70396.99271907067	NA	0	NA	TRUE	NA	NA	NA	A	coding	219	660	1186	1845	30.0	5	True	AATAAA	-21
PB.10704.11	chr7	+	3867	6	novel_not_in_catalog	ZKSCAN5	novel	4178	7	NA	NA	40	-328	any annotated donor/acceptor	FALSE	canonical	1	868	junction_1	39137.84019794654	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	1053	2660	20.0	0	True	NA	NA
PB.7802.1	chr22	+	6140	24	novel_in_catalog	TNRC6B	novel	415	4	NA	NA	-36	403	combination_of_known_junctions	FALSE	canonical	1	16908	junction_5	44499.147146135954	NA	3	NA	TRUE	NA	NA	NA	C	coding	1759	5280	339	5618	85.0	10	True	NA	NA
PB.9845.1	chr6	+	2290	7	incomplete-splice_match	HLA-E	ENST00000376630.4	2601	8	430	11	385	-11	5prime_fragment	FALSE	canonical	1	4259547	junction_1	1007217.9273618688	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	120	842	10.0	-3692	False	AATAAA	-19
PB.4861.1	chr17	-	3416	4	full-splice_match	FAM222B	ENST00000577376.5	720	4	-25	-2671	8	626	multi-exon	FALSE	canonical	1	18906	junction_2	66336.87378993844	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	209	1897	85.0	-33	True	NA	NA
PB.4861.2	chr17	-	3372	3	full-splice_match	FAM222B	ENST00000581407.5	4161	3	18	771	-13	626	multi-exon	FALSE	canonical	1	41011	junction_2	60660.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	165	1853	85.0	-23	True	NA	NA
PB.4861.3	chr17	-	3365	3	novel_in_catalog	FAM222B	novel	4033	3	NA	NA	-2	626	combination_of_known_junctions	FALSE	canonical	1	37066	junction_1	4602.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	434	1305	542	1846	85.0	-23	True	NA	NA
PB.4861.4	chr17	-	3242	3	full-splice_match	FAM222B	ENST00000582266.5	2613	3	-3	-626	-3	626	multi-exon	FALSE	canonical	1	37066	junction_1	1972.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	434	1305	419	1723	85.0	-5	True	NA	NA
PB.4861.5	chr17	-	3492	3	full-splice_match	FAM222B	ENST00000452648.7	2836	3	-19	-637	-19	624	multi-exon	FALSE	canonical	1	46271	junction_2	58030.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	542	1629	347	1975	75.0	-40	True	NA	NA
PB.4861.6	chr17	-	2716	3	full-splice_match	FAM222B	ENST00000581407.5	4161	3	35	1410	2	0	multi-exon	FALSE	canonical	1	41011	junction_2	60660.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	148	1836	70.0	-6	True	ATTAAA	-7
PB.4861.7	chr17	-	2871	3	full-splice_match	FAM222B	ENST00000452648.7	2836	3	-35	0	-35	0	multi-exon	FALSE	canonical	1	46271	junction_2	58030.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	363	1991	70.0	-56	True	ATTAAA	-7
PB.7802.3	chr22	+	5845	22	novel_in_catalog	TNRC6B	novel	15958	24	NA	NA	-1	183	combination_of_known_junctions	FALSE	canonical	1	16908	junction_2	46027.84400319839	NA	1	NA	TRUE	NA	NA	NA	C	coding	1690	5073	471	5543	80.0	-1	True	TTTAAA	-4
PB.9402.6	chr5	-	1691	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	280	2362	-13	111	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	27	449	80.0	-14	True	NA	NA
PB.9280.1	chr5	-	1630	17	novel_in_catalog	GTF2H2	novel	4336	16	NA	NA	1	-71	no_combination_of_known_junctions	FALSE	canonical	1	212	junction_15	57806.686937882674	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	166	1353	35.0	NA	False	TATAAA	-12
PB.743.6	chr1	+	3833	16	novel_not_in_catalog	PIP5K1A	novel	373	4	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	97052.19186304977	NA	6	2	TRUE	NA	NA	NA	C	coding	309	930	1233	2162	10.0	1	True	AATAAA	-25
PB.2459.1	chr12	+	2345	1	novel_in_catalog	AC092821.3	novel	2767	10	NA	NA	13871	-6410	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-6633	False	NA	NA
PB.7802.5	chr22	+	5485	21	full-splice_match	TNRC6B	ENST00000335727.13	17933	21	-17	12465	0	-17	multi-exon	FALSE	canonical	1	16908	junction_2	43193.77818769157	NA	1	NA	TRUE	NA	NA	NA	C	coding	1711	5136	248	5383	70.0	0	True	AATAAA	-10
PB.7802.6	chr22	+	4318	1	novel_in_catalog	TNRC6B	novel	15958	24	NA	NA	2	26062	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	2	True	NA	NA
PB.6704.2	chr2	+	2810	3	novel_not_in_catalog	RABL2A	novel	2179	9	NA	NA	2	-3	intron_retention	FALSE	canonical	1	2733	junction_2	6657.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6	True	AATAAA	-23
PB.9402.5	chr5	-	1900	4	full-splice_match	ATG12	ENST00000509910.1	4333	4	290	2143	-3	-2	multi-exon	FALSE	canonical	1	35545	junction_2	24011.50796782428	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	17	439	15.0	-4	True	AATAAA	-16
PB.11762.12	chr9	+	2657	19	full-splice_match	GSN	ENST00000373808.8	2664	19	112	-105	4	0	multi-exon	FALSE	canonical	1	60308	junction_2	1073217.8557005434	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	222	2417	10.0	8	True	AATAAA	-18
PB.10947.14	chr7	+	3407	5	novel_not_in_catalog	RBM33	novel	10149	18	NA	NA	6832	2369	any annotated donor/acceptor	FALSE	canonical	1	382	junction_1	87415.66635048891	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	47	619	20.0	8045	False	TATAAA	-20
PB.6535.12	chr2	-	2641	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	8	1998	7	875	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	204	1364	85.0	-19	True	TTTAAA	-13
PB.12393.1	chrY	-	3684	4	intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1225	junction_1	810.0584341062481	NA	1	1	FALSE	NA	NA	NA	A	coding	42	129	262	390	5.0	-1	True	NA	NA
PB.12393.2	chrY	-	3477	4	intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	836	junction_1	987.2028948273783	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	197	False	NA	NA
PB.6535.11	chr2	-	3239	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	3	1405	2	-645	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	209	1369	40.0	-24	True	ATTAAA	-20
PB.6535.16	chr2	-	2550	14	novel_not_in_catalog	C2orf42	novel	579	2	NA	NA	-82	-28840	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	277378.71992476383	NA	12	4	TRUE	NA	NA	NA	C	coding	246	741	772	1512	25.0	0	True	AATACA	-21
PB.6535.17	chr2	-	7039	10	novel_in_catalog	C2orf42	novel	579	2	NA	NA	-12	-28843	intron_retention	FALSE	canonical	1	167808	junction_5	176951.40460464155	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	5564	6004	35.0	-13	True	AATACA	-18
PB.6535.14	chr2	-	3697	12	novel_in_catalog	C2orf42	novel	579	2	NA	NA	-75	-28838	intron_retention	FALSE	canonical	1	391939	junction_7	120734.61478756135	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	1917	2657	20.0	7	True	AATACA	-23
PB.6535.15	chr2	-	2349	12	full-splice_match	TIA1	ENST00000415783.6	4633	12	44	2240	-5	633	multi-exon	FALSE	canonical	1	80459	junction_8	188716.3597837149	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	187	1314	35.0	-2	True	AATACA	-18
PB.635.65	chr1	-	2687	18	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	-2	-55	no_combination_of_known_junctions	FALSE	canonical	1	3451	junction_10	1574889.7282230672	NA	3	NA	TRUE	NA	NA	NA	C	coding	696	2091	440	2530	75.0	6	True	NA	NA
PB.6535.18	chr2	-	2394	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	13	2240	-6	633	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	199	1359	35.0	-14	True	AATACA	-18
PB.6535.19	chr2	-	3749	12	novel_in_catalog	C2orf42	novel	579	2	NA	NA	0	-28844	intron_retention	FALSE	canonical	1	167808	junction_5	171235.2053283282	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	2275	2715	35.0	-1	True	AATACA	-17
PB.8305.2	chr3	-	3748	5	full-splice_match	NAA50	ENST00000240922.7	6135	5	18	2369	-7	165	multi-exon	FALSE	canonical	1	885142	junction_4	202105.9816321625	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	308	817	25.0	8399	False	ATTAAA	-27
PB.7175.2	chr20	+	4494	4	full-splice_match	BTBD3	ENST00000449299.5	849	4	-61	-3584	-8	4	multi-exon	FALSE	canonical	1	24069	junction_2	141141.64200625636	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	451	1566	10.0	-24	True	AATAAA	-13
PB.771.2	chr1	-	2409	14	novel_not_in_catalog	CRTC2	novel	2290	10	NA	NA	-9	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	148990.68152720432	NA	0	NA	TRUE	NA	NA	NA	B	coding	143	432	1546	1977	15.0	-41	True	AATAAA	-13
PB.550.4	chr1	-	1813	7	full-splice_match	GCLM	ENST00000370238.7	4857	7	-194	3238	-148	-1409	multi-exon	FALSE	canonical	1	171114	junction_6	130124.8177323945	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	442	1266	20.0	56	False	AATAAA	-31
PB.1914.2	chr11	+	6055	1	novel_in_catalog	CREB3L1	novel	2687	12	NA	NA	1	-24223	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	178	537	3473	4009	80.0	0	True	NA	NA
PB.8216.1	chr3	+	4514	3	novel_in_catalog	KBTBD8	novel	568	2	NA	NA	-49	-4	combination_of_known_junctions	FALSE	canonical	1	8854	junction_1	17906.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	119	1693	40.0	-49	False	AATAAA	-15
PB.8216.2	chr3	+	4676	4	full-splice_match	KBTBD8	ENST00000417314.2	4680	4	0	4	0	-4	multi-exon	FALSE	canonical	1	20404	junction_1	9912.424269011535	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	50	1855	40.0	0	True	AATAAA	-15
PB.1914.1	chr11	+	2658	12	full-splice_match	CREB3L1	ENST00000621158.4	2687	12	-1	30	-1	-17	multi-exon	FALSE	canonical	0	0	junction_11	154470.85093915864	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	453	2012	90.0	-2	True	NA	NA
PB.9061.7	chr4	-	2641	4	novel_in_catalog	CBR4	novel	1198	6	NA	NA	-22	0	intron_retention	FALSE	canonical	1	23654	junction_3	128389.69708491238	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	4038	False	NA	NA
PB.8140.1	chr3	+	1539	11	full-splice_match	HEMK1	ENST00000232854.8	6087	11	282	4266	1	-3	multi-exon	FALSE	canonical	1	75349	junction_1	58548.13468215704	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	271	1287	40.0	-43	True	AGTAAA	-13
PB.2135.1	chr11	-	4668	9	full-splice_match	DHCR7	ENST00000355527.7	2666	9	12	-2014	12	2014	multi-exon	TRUE	canonical	1	710903	junction_8	141913.8576667528	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	266	1693	45.0	-6	False	NA	NA
PB.9932.2	chr6	+	8796	58	novel_not_in_catalog	ITPR3	novel	9870	59	NA	NA	12490	-8	any annotated donor/acceptor	FALSE	canonical	1	1051	junction_1	110686.43351939226	NA	1	NA	TRUE	NA	NA	NA	C	coding	2610	7833	183	8015	35.0	NA	False	AATAAA	-14
PB.2135.2	chr11	-	2576	9	full-splice_match	DHCR7	ENST00000407721.6	2601	9	26	-1	-2	1	multi-exon	FALSE	canonical	1	13864	junction_8	329018.261294871	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	187	1614	10.0	25	True	NA	NA
PB.9214.2	chr5	-	2415	11	full-splice_match	PAIP1	ENST00000306846.7	2782	11	363	4	337	-4	multi-exon	FALSE	canonical	1	454	junction_1	61812.32909088607	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	207	1310	35.0	978	False	AATAAA	-21
PB.10214.1	chr6	+	3220	25	full-splice_match	ENPP1	ENST00000647893.1	7438	25	59	4159	-44	132	multi-exon	FALSE	canonical	1	43474	junction_1	17919.237730253295	NA	0	NA	TRUE	NA	NA	NA	A	coding	873	2622	114	2735	75.0	59	False	NA	NA
PB.8128.5	chr3	+	6027	24	novel_not_in_catalog	RBM6	novel	2342	21	NA	NA	22527	18908	intron_retention	FALSE	non_canonical	0	0	junction_5	293019.4531505808	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	3599	5530	20.0	-35	True	AAGAAA	-6
PB.1407.7	chr10	+	2255	6	novel_in_catalog	TIMM23B	novel	1142	7	NA	NA	-11	-164	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46624.10404672674	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	319	633	45.0	NA	False	AATAAA	-10
PB.11263.6	chr8	-	2557	8	novel_in_catalog	STK3	novel	594	4	NA	NA	-58	-2	no_combination_of_known_junctions	FALSE	canonical	1	65	junction_7	79933.00247413838	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	292	1350	15.0	-69	False	AATAAA	-19
PB.6517.12	chr2	+	3198	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	65	-977	-8	977	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	27	785	35.0	21	True	AATAAA	-27
PB.1407.6	chr10	+	2442	8	full-splice_match	TIMM23B	ENST00000478381.5	2623	8	17	164	-15	-164	multi-exon	FALSE	canonical	0	0	junction_1	44471.851475663454	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	368	820	45.0	NA	False	AATAAA	-10
PB.1964.16	chr11	+	2373	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	-4	-494	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	384	1277	35.0	-5	True	AATAAA	-18
PB.9214.7	chr5	-	1761	10	novel_not_in_catalog	PAIP1	novel	2782	11	NA	NA	248	-8	any annotated donor/acceptor	FALSE	canonical	1	454	junction_1	67052.49300361621	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	438	1433	30.0	889	False	AATAAA	-28
PB.5853.20	chr19	-	5153	10	incomplete-splice_match	SUGP2	ENST00000337018.10	3640	11	64	1639	1	-165	3prime_fragment	FALSE	canonical	1	218750	junction_9	132005.82058023702	NA	1	NA	TRUE	NA	NA	NA	C	coding	1082	3249	71	3319	70.0	21	True	NA	NA
PB.6879.1	chr2	+	1366	6	full-splice_match	UBE2E3	ENST00000410062.8	1570	6	192	12	-9	5	multi-exon	FALSE	canonical	1	88427	junction_2	209164.85723887748	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	202	825	25.0	-3237	False	AATAAA	-21
PB.11304.1	chr8	-	6654	6	full-splice_match	TRPS1	ENST00000220888.9	5480	6	-272	-902	27	902	multi-exon	TRUE	canonical	1	26253	junction_5	32404.65336336743	NA	7	NA	TRUE	NA	NA	NA	C	coding	1281	3846	433	4278	40.0	0	True	AATAAA	-28
PB.5929.9	chr19	+	2654	3	novel_in_catalog	LINC01531	novel	728	4	NA	NA	-109	-5	intron_retention	FALSE	canonical	1	1073	junction_2	3371.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-531	False	NA	NA
PB.12383.2	chrY	+	2088	8	full-splice_match	PRKY	ENST00000528056.5	7218	8	9	5121	9	4559	multi-exon	FALSE	canonical	1	4976	junction_3	12575.201829840526	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	333	1166	10.0	7	True	ATTAAA	-17
PB.12383.1	chrY	+	3801	8	full-splice_match	PRKY	ENST00000528056.5	7218	8	2	3415	2	-3415	multi-exon	FALSE	canonical	1	4976	junction_3	12575.201829840526	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	340	1173	85.0	0	True	NA	NA
PB.7627.15	chr22	+	3224	17	full-splice_match	MED15	ENST00000292733.11	3252	17	13	15	3	0	multi-exon	FALSE	canonical	1	202826	junction_8	206229.55598903276	NA	29	4	TRUE	NA	NA	NA	C	coding	748	2247	65	2311	15.0	-1	True	AATAAA	-16
PB.7638.15	chr22	-	2434	9	full-splice_match	MAPK1	ENST00000215832.10	11022	9	-35	8623	16	861	multi-exon	FALSE	canonical	1	512215	junction_8	125647.88117891205	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	225	1307	25.0	-20	True	AATAAA	-23
PB.7627.14	chr22	+	3442	17	novel_in_catalog	MED15	novel	590	6	NA	NA	4	-4	intron_retention	FALSE	canonical	1	176575	junction_8	221012.87764771763	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	82	2166	10.0	-18	True	AATAAA	-12
PB.11304.2	chr8	-	4426	6	full-splice_match	TRPS1	ENST00000220888.9	5480	6	-299	1353	0	20	multi-exon	FALSE	canonical	1	26253	junction_5	32404.65336336743	NA	1	NA	TRUE	NA	NA	NA	C	coding	1281	3846	460	4305	20.0	-1	True	ATTAAA	-35
PB.7627.17	chr22	+	3279	19	novel_in_catalog	MED15	novel	590	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	10077	junction_5	247331.96961951218	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	68	2353	10.0	-4	True	AATAAA	-29
PB.9483.49	chr5	+	2723	13	novel_not_in_catalog	MATR3	novel	3249	17	NA	NA	8	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1200235.7817283554	NA	2	1	TRUE	NA	NA	NA	C	coding	554	1665	10	1674	10.0	-5097	False	NA	NA
PB.5929.5	chr19	+	2829	6	novel_not_in_catalog	LINC01531	novel	728	4	NA	NA	-19	-6	intron_retention	FALSE	canonical	1	158	junction_2	2772.644008883939	NA	3	NA	TRUE	NA	NA	NA	B	coding	299	900	898	1797	35.0	-9755	False	NA	NA
PB.7627.11	chr22	+	3488	19	novel_in_catalog	MED15	novel	590	6	NA	NA	-2	1	intron_retention	FALSE	canonical	1	20826	junction_1	269079.82933162956	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	284	2572	15.0	-24	True	AATAAA	-19
PB.6993.12	chr2	+	3371	19	incomplete-splice_match	XRCC5	ENST00000392132.6	3428	21	110	10073	56	-9204	3prime_fragment	FALSE	canonical	1	2064329	junction_8	509292.63684770075	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	31	2181	80.0	27	True	NA	NA
PB.6934.5	chr2	+	2136	11	novel_in_catalog	SPATS2L	novel	584	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	21245	junction_1	247540.80501737486	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	169	1638	15.0	0	True	ATTAAA	-15
PB.7627.10	chr22	+	3376	18	novel_in_catalog	MED15	novel	590	6	NA	NA	1	3	intron_retention	FALSE	canonical	1	20826	junction_1	264436.32617957296	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	290	2458	15.0	-30	True	AATAAA	-21
PB.9483.44	chr5	+	2573	13	novel_in_catalog	MATR3	novel	3249	17	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	7660	junction_7	1139286.7202311612	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	18	1529	20.0	-10	True	NA	NA
PB.2922.1	chr12	-	4375	20	full-splice_match	DDX54	ENST00000306014.9	4377	20	-4	6	-4	-6	multi-exon	FALSE	canonical	1	314831	junction_9	167629.01117364093	NA	4	1	TRUE	NA	NA	NA	C	coding	881	2646	33	2678	40.0	-9	True	AATAAA	-19
PB.7627.12	chr22	+	3166	18	novel_in_catalog	MED15	novel	590	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	10077	junction_5	239305.19677381645	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	88	2253	15.0	-24	True	AATAAA	-16
PB.2922.2	chr12	-	2960	20	full-splice_match	DDX54	ENST00000314045.11	4380	20	101	1319	62	82	multi-exon	FALSE	canonical	1	314831	junction_9	158683.83939881538	NA	2	1	TRUE	NA	NA	NA	C	coding	799	2400	177	2576	10.0	4350	False	AATAAA	-17
PB.2521.21	chr12	+	3542	29	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	0	29	combination_of_known_junctions	FALSE	canonical	1	104089	junction_7	83248.86299409709	NA	2	NA	TRUE	NA	NA	NA	C	coding	993	2982	287	3268	25.0	0	True	TTTAAA	-21
PB.3279.8	chr13	+	2281	18	novel_in_catalog	CDC16	novel	2211	19	NA	NA	15	0	intron_retention	FALSE	canonical	1	10945	junction_17	250696.10187694896	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	411	1748	5.0	5	True	AATAAA	-15
PB.3279.9	chr13	+	2123	18	full-splice_match	CDC16	ENST00000356221.7	2203	18	80	0	-4	0	multi-exon	FALSE	canonical	1	295610	junction_1	125722.23292964777	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	29	1891	5.0	4	True	AATAAA	-15
PB.3279.4	chr13	+	3277	17	novel_in_catalog	CDC16	novel	2211	19	NA	NA	-8	0	intron_retention	FALSE	canonical	1	295610	junction_1	128897.29358665699	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	1954	3045	5.0	-18	True	AATAAA	-15
PB.2521.26	chr12	+	5017	21	novel_not_in_catalog	PPFIBP1	novel	1191	10	NA	NA	365	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	106099.82921026548	NA	6	1	TRUE	NA	NA	NA	C	coding	422	1269	1068	2336	15.0	NA	False	AATAAA	-20
PB.3279.6	chr13	+	2341	19	incomplete-splice_match	CDC16	ENST00000650489.1	2204	20	-37	-18	10	0	intron_retention	FALSE	canonical	1	10945	junction_18	222621.15790220647	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	189	1808	5.0	0	True	AATAAA	-15
PB.3279.7	chr13	+	2143	18	novel_in_catalog	CDC16	novel	2211	19	NA	NA	13	0	no_combination_of_known_junctions	FALSE	canonical	1	50421	junction_1	188007.85990269211	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	413	1993	5.0	3	True	AATAAA	-15
PB.3279.1	chr13	+	2165	18	novel_in_catalog	CDC16	novel	2211	19	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	36113	junction_14	183252.21899161133	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	215	1540	5.0	-26	True	AATAAA	-15
PB.3279.2	chr13	+	1972	6	full-splice_match	CDC16	ENST00000494766.5	1003	6	-146	-823	-15	823	multi-exon	FALSE	canonical	1	295610	junction_1	125271.84587863309	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	214	789	70.0	-25	True	AATAGA	-24
PB.3279.3	chr13	+	3223	16	novel_in_catalog	CDC16	novel	2211	19	NA	NA	-9	0	intron_retention	FALSE	canonical	1	50421	junction_1	177846.09629744475	NA	13	NA	TRUE	NA	NA	NA	C	coding	363	1092	1900	2991	5.0	-19	True	AATAAA	-15
PB.926.4	chr1	-	2870	13	full-splice_match	SCYL3	ENST00000367771.10	6364	13	44	3450	44	-7	multi-exon	FALSE	canonical	1	64921	junction_11	21373.644613297834	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	172	2238	35.0	-13	True	AATAAA	-25
PB.6517.11	chr2	+	5000	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	44	-2758	-29	2758	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	1	1	TRUE	NA	NA	NA	C	coding	252	759	48	806	100.0	0	True	CATAAA	-37
PB.9483.43	chr5	+	2845	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	9	4	combination_of_known_junctions	FALSE	canonical	1	94176	junction_1	947355.6996217287	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	8	1831	25.0	0	True	AATAAA	-22
PB.7581.8	chr21	+	2215	7	incomplete-splice_match	PRMT2	ENST00000397638.6	2131	11	55	4796	-4	725	3prime_fragment	FALSE	canonical	1	581600	junction_1	231050.90434847903	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	151	984	15.0	-4	True	ATTAAA	-32
PB.7581.9	chr21	+	1624	8	full-splice_match	PRMT2	ENST00000458387.6	1874	8	74	176	-5	-10	multi-exon	FALSE	canonical	1	14324	junction_6	374305.83455963887	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	152	1057	20.0	-5	True	NA	NA
PB.7581.6	chr21	+	2829	11	full-splice_match	PRMT2	ENST00000397638.6	2131	11	48	-746	10	573	multi-exon	FALSE	canonical	1	290231	junction_9	282634.98512549716	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	158	1459	15.0	-11	True	NA	NA
PB.7581.7	chr21	+	3343	7	incomplete-splice_match	PRMT2	ENST00000397638.6	2131	11	49	3674	-10	7	intron_retention	FALSE	canonical	1	581600	junction_1	231050.90434847903	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	157	990	20.0	-10	True	AATAAA	-23
PB.7581.4	chr21	+	2212	11	novel_not_in_catalog	PRMT2	novel	2688	12	NA	NA	7	-9	intron_retention	FALSE	canonical	1	130	junction_9	331057.40384833567	NA	2	NA	TRUE	NA	NA	NA	C	coding	478	1437	161	1597	20.0	-14	True	NA	NA
PB.7581.5	chr21	+	1590	7	incomplete-splice_match	PRMT2	ENST00000397638.6	2131	11	47	5429	9	92	3prime_fragment	FALSE	canonical	1	581600	junction_1	231050.90434847903	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	159	992	70.0	-12	True	NA	NA
PB.7581.2	chr21	+	2904	7	novel_not_in_catalog	PRMT2	novel	2688	12	NA	NA	3	713	intron_retention	FALSE	canonical	1	2652	junction_6	391516.2189085814	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	165	908	25.0	-18	True	ATTAAA	-20
PB.7581.3	chr21	+	4575	1	novel_in_catalog	PRMT2	novel	2688	12	NA	NA	6	-9655	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-15	True	NA	NA
PB.5615.1	chr19	-	2014	11	full-splice_match	APBA3	ENST00000316757.3	2075	11	62	-1	62	0	multi-exon	FALSE	canonical	1	98583	junction_8	34670.1080674693	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	140	1867	25.0	6	True	AGTAAA	-17
PB.8014.1	chr3	+	2267	9	novel_not_in_catalog	GOLGA4	novel	7772	24	NA	NA	-819	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	208479.87022338482	NA	2	1	TRUE	NA	NA	NA	B	coding	338	1017	246	1262	30.0	-1530	False	AATAAA	-14
PB.1018.10	chr1	-	1840	3	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	2	58539	2	-58535	3prime_fragment	FALSE	canonical	1	134739	junction_2	1004.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1584	256	1839	70.0	1	True	AATAAA	-44
PB.2081.1	chr11	+	2098	7	novel_not_in_catalog	RAB1B	novel	2007	6	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	499	junction_2	465870.5985218845	NA	19	2	TRUE	NA	NA	NA	C	coding	249	750	98	847	20.0	-17	True	AATAAA	-40
PB.2081.2	chr11	+	1903	6	full-splice_match	RAB1B	ENST00000311481.10	2007	6	102	2	45	-2	multi-exon	FALSE	canonical	1	339993	junction_5	320690.8843909349	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	46	651	20.0	-4	True	AATAAA	-41
PB.6803.1	chr2	-	2011	15	novel_in_catalog	RBMS1	novel	4016	16	NA	NA	-33	-5	combination_of_known_junctions	FALSE	canonical	1	168	junction_1	47137.62629161723	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	465	1724	90.0	-21	True	NA	NA
PB.2302.8	chr11	+	2740	2	novel_not_in_catalog	UBE4A	novel	6103	20	NA	NA	25	-22394	intron_retention	TRUE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	99	300	1047	1346	60.0	-24	True	NA	NA
PB.2302.9	chr11	+	7140	19	novel_in_catalog	UBE4A	novel	6103	20	NA	NA	26	-2	intron_retention	FALSE	canonical	1	244713	junction_8	56897.583286458714	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	106	2118	25.0	-23	True	AATAAA	-17
PB.5193.10	chr17	-	4446	4	full-splice_match	GNA13	ENST00000439174.6	4922	4	220	256	220	-256	multi-exon	FALSE	canonical	1	382034	junction_2	49261.96982347426	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	27	1160	45.0	-15	True	AATAAA	-20
PB.2302.1	chr11	+	3946	20	full-splice_match	UBE4A	ENST00000252108.7	6103	20	-4	2161	-4	543	multi-exon	FALSE	canonical	1	244713	junction_8	57216.584225921724	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	136	3336	20.0	-53	True	AAAAAG	-22
PB.2302.2	chr11	+	6233	21	novel_not_in_catalog	UBE4A	novel	6103	20	NA	NA	-3	0	any annotated donor/acceptor	TRUE	canonical	1	4189	junction_2	113543.33552317151	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	266	3466	25.0	-52	True	AATAAA	-15
PB.2302.3	chr11	+	3274	20	full-splice_match	UBE4A	ENST00000252108.7	6103	20	-3	2832	-3	-128	multi-exon	FALSE	canonical	1	244713	junction_8	57216.584225921724	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3138	135	3272	60.0	-52	True	NA	NA
PB.2302.4	chr11	+	6084	20	full-splice_match	UBE4A	ENST00000252108.7	6103	20	18	1	18	-1	multi-exon	FALSE	canonical	1	244713	junction_8	57216.584225921724	NA	3	1	TRUE	NA	NA	NA	C	coding	1066	3201	114	3314	20.0	-31	True	AATAAA	-18
PB.2302.5	chr11	+	3638	20	full-splice_match	UBE4A	ENST00000252108.7	6103	20	15	2450	15	254	multi-exon	FALSE	canonical	1	244713	junction_8	57216.584225921724	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	117	3317	25.0	-34	True	AATGAA	-20
PB.2302.6	chr11	+	6103	20	novel_not_in_catalog	UBE4A	novel	6103	20	NA	NA	16	-2	any annotated donor/acceptor	FALSE	canonical	1	15842	junction_8	89836.88396871163	NA	0	NA	TRUE	NA	NA	NA	C	coding	1072	3219	116	3334	25.0	-33	True	AATAAA	-17
PB.2302.7	chr11	+	5746	19	novel_in_catalog	UBE4A	novel	6103	20	NA	NA	20	1	no_combination_of_known_junctions	FALSE	canonical	1	14692	junction_8	91831.05663570603	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	1362	2978	25.0	-29	True	AATAAA	-16
PB.4592.7	chr16	+	3845	9	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	canonical	1	1554	junction_3	151516.68498711413	NA	3	1	TRUE	NA	NA	NA	C	coding	291	876	1650	2525	25.0	0	True	AATAAA	-12
PB.4592.6	chr16	+	3900	8	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	202316	junction_5	102336.33807166625	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	1912	2580	25.0	0	True	AATAAA	-12
PB.4592.5	chr16	+	6561	8	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	279547	junction_1	81573.88069018871	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	4518	5240	25.0	0	True	AATAAA	-13
PB.4592.4	chr16	+	4724	2	full-splice_match	IRF8	ENST00000570088.1	553	2	-26	-4145	-1	-2206	multi-exon	FALSE	canonical	1	279547	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	96	291	64	354	85.0	0	True	NA	NA
PB.4592.3	chr16	+	4138	8	novel_in_catalog	IRF8	novel	3030	9	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	202316	junction_5	101333.82905092675	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	2008	2817	25.0	-1	True	AATAAA	-13
PB.4592.2	chr16	+	4754	9	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-4	-6	any annotated donor/acceptor	FALSE	canonical	1	26654	junction_3	145193.65585782105	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	2486	3433	25.0	-3	True	AATAAA	-13
PB.4592.1	chr16	+	2664	9	full-splice_match	IRF8	ENST00000268638.9	3030	9	360	6	0	-6	multi-exon	FALSE	canonical	1	202316	junction_6	97039.7907844219	NA	2	NA	TRUE	NA	NA	NA	C	coding	426	1281	63	1343	25.0	1	True	AATAAA	-13
PB.8267.1	chr3	+	1611	6	full-splice_match	TMEM45A	ENST00000323523.8	1567	6	-40	-4	-40	4	multi-exon	FALSE	canonical	1	98048	junction_1	134875.52507642	NA	1	NA	TRUE	NA	NA	NA	A	coding	275	828	354	1181	20.0	-40	True	AATAAA	-29
PB.1085.1	chr1	+	7148	15	novel_not_in_catalog	PFKFB2	novel	543	6	NA	NA	-220	-7	any annotated donor/acceptor	FALSE	canonical	1	10862	junction_1	36097.02163649392	NA	3	NA	TRUE	NA	NA	NA	C	coding	505	1518	186	1703	20.0	-1	True	AATAAA	-22
PB.4716.29	chr17	+	3672	8	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	2	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	82958.3634063572	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	292	651	25.0	23	True	AATAAA	-11
PB.4592.9	chr16	+	2759	10	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-6	any annotated donor/acceptor	FALSE	canonical	1	47	junction_8	159320.34155618752	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	64	1266	25.0	0	True	AATAAA	-13
PB.4592.8	chr16	+	2925	3	novel_not_in_catalog	IRF8	novel	3030	9	NA	NA	-1	-2206	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	139773.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	96	291	64	354	85.0	0	True	NA	NA
PB.8254.2	chr3	+	1961	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	247	-956	247	956	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	306	921	51	971	15.0	2	True	ATTAAA	-28
PB.10477.10	chr7	-	2352	1	novel_in_catalog	NT5C3A	novel	1704	9	NA	NA	29	-31165	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	28	True	NA	NA
PB.8254.3	chr3	+	2170	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	611	-1529	611	1529	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	77	234	374	607	25.0	-1392	False	AATAAA	-19
PB.11787.10	chr9	-	3270	7	full-splice_match	PPP6C	ENST00000373547.8	4118	7	19	829	-16	-828	multi-exon	FALSE	canonical	1	582164	junction_6	176368.7410500606	NA	4	NA	TRUE	NA	NA	NA	C	coding	305	918	82	999	30.0	-14	True	AATAAA	-35
PB.854.8	chr1	-	2225	8	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	0	-11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	64259.25893136462	NA	4	NA	TRUE	NA	NA	NA	C	coding	220	663	71	733	80.0	-11	True	NA	NA
PB.10704.13	chr7	+	4525	6	incomplete-splice_match	ZKSCAN5	ENST00000394170.6	4344	7	299	364	-5	-326	5prime_fragment	FALSE	canonical	1	36774	junction_3	25505.36227541181	NA	1	1	TRUE	NA	NA	NA	C	coding	837	2514	803	3316	15.0	-11	True	NA	NA
PB.5520.11	chr18	-	4252	29	novel_not_in_catalog	RTTN	novel	8088	49	NA	NA	2420	211	any annotated donor/acceptor	FALSE	canonical	1	590	junction_28	16707.925171172817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1241	3726	374	4099	45.0	-2092	False	AATAAA	-38
PB.11787.12	chr9	-	2450	7	full-splice_match	PPP6C	ENST00000373547.8	4118	7	2	1666	2	-1665	multi-exon	FALSE	canonical	1	582164	junction_6	176368.7410500606	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	99	1016	30.0	98	False	AATAAA	-17
PB.7714.1	chr22	+	2539	1	genic	PIK3IP1-AS1	novel	NA	NA	NA	NA	-1621	-44605	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-1725	False	AAAAAG	-31
PB.11495.27	chr9	-	2551	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-50	1597	-50	-1315	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	727	2181	369	2549	55.0	-18	True	AATGAA	-15
PB.11787.13	chr9	-	2240	5	novel_in_catalog	PPP6C	novel	4118	7	NA	NA	53	-1581	no_combination_of_known_junctions	FALSE	canonical	1	26850	junction_3	419266.0276825294	NA	3	NA	TRUE	NA	NA	NA	C	coding	158	477	246	722	30.0	-4	True	AATAAA	-14
PB.11495.26	chr9	-	2682	3	full-splice_match	TOPORS	ENST00000360538.6	4098	3	-57	1473	-57	-1191	multi-exon	FALSE	canonical	1	61617	junction_2	30696.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2307	376	2682	45.0	-25	True	NA	NA
PB.488.6	chr1	+	3673	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	56	-741	-25	741	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	202	1215	90.0	0	True	AAGAAA	-21
PB.4268.7	chr16	-	3656	18	novel_not_in_catalog	RRN3	novel	3762	18	NA	NA	-21	1	intron_retention	FALSE	canonical	1	741	junction_4	163142.22262510346	NA	2	NA	TRUE	NA	NA	NA	C	coding	634	1905	42	1946	15.0	NA	False	AATAAA	-15
PB.4268.4	chr16	-	3823	19	novel_not_in_catalog	RRN3	novel	3762	18	NA	NA	28	-2	intron_retention	FALSE	canonical	1	741	junction_4	163472.7852250099	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	862	2103	10.0	NA	False	AATAAA	-25
PB.4268.3	chr16	-	3645	18	full-splice_match	RRN3	ENST00000327307.11	2039	18	0	-1606	0	-1	multi-exon	FALSE	canonical	1	81	junction_17	163245.82841190544	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	68	1924	5.0	NA	False	AATAAA	-26
PB.4268.2	chr16	-	3726	18	full-splice_match	RRN3	ENST00000198767.10	3762	18	33	3	27	-3	multi-exon	FALSE	canonical	1	741	junction_4	158416.15618731137	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	52	2007	10.0	NA	False	AATAAA	-24
PB.4268.1	chr16	-	3643	17	full-splice_match	RRN3	ENST00000429751.6	2198	17	-42	-1403	20	-3	multi-exon	FALSE	canonical	1	77	junction_14	161607.48446185852	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	59	1924	10.0	NA	False	AATAAA	-24
PB.5630.3	chr19	-	4148	22	novel_not_in_catalog	DPP9	novel	3851	19	NA	NA	-391	-1	any annotated donor/acceptor	TRUE	canonical	1	950	junction_21	108597.47129796773	NA	1	NA	TRUE	NA	NA	NA	C	coding	892	2679	133	2811	10.0	605	False	ATTAAA	-21
PB.5630.2	chr19	-	4250	22	full-splice_match	DPP9	ENST00000262960.13	4295	22	45	0	2	0	multi-exon	FALSE	canonical	1	191669	junction_21	82882.71470606896	NA	1	NA	TRUE	NA	NA	NA	C	coding	892	2679	234	2912	10.0	-50	True	ATTAAA	-22
PB.5630.1	chr19	-	4363	23	novel_in_catalog	DPP9	novel	3851	19	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	1	17327	junction_21	127984.84787125427	NA	2	NA	TRUE	NA	NA	NA	C	coding	892	2679	346	3024	10.0	-52	True	ATTAAA	-23
PB.5630.7	chr19	-	4098	22	full-splice_match	DPP9	ENST00000262960.13	4295	22	46	151	3	-151	multi-exon	FALSE	canonical	1	191669	junction_21	82882.71470606896	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	233	2911	85.0	-49	True	NA	NA
PB.5630.5	chr19	-	4379	23	novel_in_catalog	DPP9	novel	3851	19	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	45657	junction_3	123393.16904794291	NA	2	NA	TRUE	NA	NA	NA	C	coding	811	2436	236	2671	30.0	-52	True	ATTAAA	-14
PB.7076.21	chr2	+	5927	31	full-splice_match	GIGYF2	ENST00000409547.5	5978	31	11	40	-2	-21	multi-exon	FALSE	canonical	1	35876	junction_3	110827.86755916681	NA	1	NA	TRUE	NA	NA	NA	C	coding	1299	3900	301	4200	75.0	11	True	NA	NA
PB.5630.8	chr19	-	4194	23	novel_in_catalog	DPP9	novel	3851	19	NA	NA	3	-151	combination_of_known_junctions	FALSE	canonical	1	17327	junction_21	127984.84787125427	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	329	3007	85.0	-35	True	NA	NA
PB.8254.8	chr3	+	2140	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	247	-1135	247	1135	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	306	921	51	971	25.0	2	True	AATAAA	-14
PB.8254.9	chr3	+	1932	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	35	-715	35	715	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	360	1083	101	1183	35.0	2	True	GATAAA	-15
PB.5704.6	chr19	-	2317	5	novel_in_catalog	KEAP1	novel	2955	6	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	1	10393	junction_2	386286.24552938394	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	123	1493	10.0	-1	True	AATAAA	-24
PB.7076.24	chr2	+	6021	32	novel_not_in_catalog	GIGYF2	novel	766	5	NA	NA	0	-21	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	124754.94965728486	NA	13	2	TRUE	NA	NA	NA	C	coding	1299	3900	395	4294	75.0	-1	True	NA	NA
PB.7030.1	chr2	+	1520	13	full-splice_match	GMPPA	ENST00000313597.9	1544	13	24	0	3	0	multi-exon	TRUE	canonical	1	215619	junction_1	124613.58440060484	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	69	1331	30.0	-10	True	AATAAA	-15
PB.3493.2	chr14	+	3586	17	novel_in_catalog	SYNE2	novel	21842	116	NA	NA	258	0	no_combination_of_known_junctions	FALSE	canonical	1	13255	junction_1	110149.12348506157	NA	0	NA	TRUE	NA	NA	NA	B	coding	878	2637	44	2680	20.0	-7	True	ATTAAA	-17
PB.3493.1	chr14	+	3808	18	novel_in_catalog	SYNE2	novel	21842	116	NA	NA	-8163	0	combination_of_known_junctions	FALSE	canonical	1	177030	junction_9	82221.96288888411	NA	0	NA	TRUE	NA	NA	NA	B	coding	949	2850	53	2902	20.0	-8458	False	ATTAAA	-17
PB.3263.5	chr13	-	2242	5	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	-14	1	no_combination_of_known_junctions	FALSE	canonical	1	6650	junction_2	200730.12953092018	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	635	1144	0.0	-34	True	AATAAA	-17
PB.3263.4	chr13	-	2415	6	full-splice_match	ANKRD10	ENST00000267339.6	2495	6	-3	83	-3	-83	multi-exon	FALSE	canonical	1	228847	junction_3	115365.736142756	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	139	1401	45.0	105	False	AATAAA	-27
PB.3263.7	chr13	-	6078	5	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	228847	junction_2	118642.52919695365	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	135	1085	5.0	109	False	AATAAA	-15
PB.3263.1	chr13	-	2701	8	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	17218	junction_5	203165.84647132046	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1094	1603	0.0	106	False	AATAAA	-17
PB.3263.3	chr13	-	2589	7	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	28002	junction_4	190380.6791610051	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	135	797	0.0	109	False	AATAAA	-17
PB.3263.2	chr13	-	2533	7	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	11	-83	combination_of_known_junctions	FALSE	canonical	1	9359	junction_4	193100.14413654787	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1010	1519	45.0	119	False	AATAAA	-27
PB.10680.3	chr7	-	1748	12	full-splice_match	SGCE	ENST00000646489.1	1733	12	-12	-3	0	0	multi-exon	FALSE	canonical	1	9679	junction_10	179272.1286674498	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	127	1476	35.0	9473	False	AATAAA	-36
PB.10680.2	chr7	-	1649	11	full-splice_match	SGCE	ENST00000648936.1	1614	11	-37	2	0	1	multi-exon	FALSE	canonical	1	198681	junction_10	123473.57895926561	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	135	1376	35.0	25	True	AATAAA	-37
PB.10680.1	chr7	-	1738	12	full-splice_match	SGCE	ENST00000646119.1	1493	12	-105	-140	0	1	multi-exon	FALSE	canonical	1	3142	junction_2	172840.23843317377	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	152	1447	35.0	8	True	AATAAA	-37
PB.3263.9	chr13	-	8008	6	novel_in_catalog	ANKRD10	novel	2495	6	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	145575	junction_3	142809.03759160344	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	6403	6912	5.0	97	False	AATAAA	-15
PB.3263.8	chr13	-	3066	6	novel_not_in_catalog	ANKRD10	novel	2495	6	NA	NA	15	-1	any annotated donor/acceptor	FALSE	canonical	1	21344	junction_1	195181.79195058128	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	121	1071	5.0	-37	True	AATAAA	-15
PB.10680.4	chr7	-	2490	1	novel_in_catalog	SGCE	novel	1672	10	NA	NA	1	-26603	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	100	303	567	869	75.0	9474	False	GATAAA	-16
PB.4889.2	chr17	-	3995	1	novel_in_catalog	EVI2A	novel	1860	3	NA	NA	89	-106	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	236	711	2648	3358	25.0	-47	True	AATAAA	-23
PB.4889.3	chr17	-	1430	2	incomplete-splice_match	EVI2A	ENST00000247270.3	1860	3	1294	117	577	-117	5prime_fragment	FALSE	canonical	1	7959	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	94	804	40.0	1293	False	AATAAA	-12
PB.4889.1	chr17	-	1561	2	full-splice_match	EVI2A	ENST00000462804.2	1854	2	195	98	60	-98	multi-exon	FALSE	canonical	1	285129	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	206	916	25.0	59	False	AATAAA	-31
PB.11244.18	chr8	+	2981	25	incomplete-splice_match	INTS8	ENST00000523731.5	4633	27	-8	5448	1	156	3prime_fragment	FALSE	canonical	1	164843	junction_1	119709.100203339	NA	2	NA	TRUE	NA	NA	NA	C	coding	946	2838	142	2979	25.0	-5	True	NA	NA
PB.8372.7	chr3	-	2752	8	novel_in_catalog	TPRA1	novel	4235	13	NA	NA	-13	-4	intron_retention	FALSE	canonical	1	18621	junction_7	173002.68193497427	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	244	753	30.0	7122	False	AATAAA	-14
PB.1120.3	chr1	-	5813	18	novel_in_catalog	AL929236.1	novel	518	3	NA	NA	-194046	-11806	no_combination_of_known_junctions	FALSE	canonical	1	1522	junction_17	39654.35492108796	NA	1	NA	TRUE	NA	NA	NA	A	coding	1088	3267	603	3869	90.0	-5	True	NA	NA
PB.11258.2	chr8	+	3566	19	full-splice_match	MATN2	ENST00000521689.5	3554	19	227	-239	-16	3	multi-exon	FALSE	canonical	1	108022	junction_1	64150.62529253195	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	248	3061	35.0	-48	True	ATTAAA	-22
PB.11244.19	chr8	+	2977	25	novel_in_catalog	INTS8	novel	735	6	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	5702	junction_16	157199.7943340249	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	133	2901	50.0	4	True	AATAAA	-26
PB.1120.2	chr1	-	5840	19	full-splice_match	PTPN14	ENST00000366956.9	12985	19	-137	7282	-137	1773	multi-exon	FALSE	canonical	1	73063	junction_18	28250.31261883182	NA	0	NA	TRUE	NA	NA	NA	C	coding	1187	3564	333	3896	90.0	440	False	NA	NA
PB.11244.16	chr8	+	2901	25	novel_in_catalog	INTS8	novel	735	6	NA	NA	0	-6	no_combination_of_known_junctions	FALSE	canonical	1	3682	junction_1	148034.4618590878	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	346	2814	25.0	-6	True	AATAAA	-37
PB.11274.2	chr8	-	3060	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1799488	junction_8	1653183.7676571065	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	1175	2614	20.0	-2	True	AATAAA	-18
PB.11244.17	chr8	+	3035	26	novel_in_catalog	INTS8	novel	735	6	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	9686	junction_1	144455.21766313046	NA	1	1	TRUE	NA	NA	NA	C	coding	886	2661	294	2954	35.0	-5	True	AATAAA	-31
PB.11274.5	chr8	-	2765	15	incomplete-splice_match	PABPC1	ENST00000522387.5	2331	16	-96	-245	-1	0	intron_retention	FALSE	canonical	1	144506	junction_13	1890134.6623582032	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	506	2320	15.0	-2	True	AATAAA	-17
PB.1401.1	chr10	-	2620	2	novel_not_in_catalog	AC068898.1	novel	335	2	NA	NA	4030	2224	any annotated donor/acceptor	FALSE	canonical	1	115	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	121	366	127	492	90.0	4042	False	NA	NA
PB.11244.14	chr8	+	3176	27	novel_in_catalog	INTS8	novel	735	6	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	21658	junction_7	146921.62046156873	NA	1	1	TRUE	NA	NA	NA	C	coding	557	1674	1428	3101	45.0	-8	True	AATAAA	-25
PB.2753.6	chr12	+	4735	10	novel_not_in_catalog	CPSF6	novel	6616	10	NA	NA	-3	-1662	any annotated donor/acceptor	FALSE	canonical	1	248857	junction_8	281835.42238102603	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	79	1737	35.0	-3	True	AATACA	-18
PB.2753.7	chr12	+	4184	10	novel_not_in_catalog	CPSF6	novel	6616	10	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	2488	junction_9	347884.4639554281	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	79	1737	25.0	-3	True	AATAAA	-14
PB.2753.4	chr12	+	2102	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	95	4419	-10	0	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	16	1671	25.0	-1	True	AATAAA	-14
PB.2753.5	chr12	+	5204	9	incomplete-splice_match	CPSF6	ENST00000435070.6	6616	10	30	8331	-5	-3546	3prime_fragment	FALSE	canonical	1	254732	junction_2	247858.35687444554	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	81	1736	85.0	-5	True	NA	NA
PB.2753.2	chr12	+	3632	11	full-splice_match	CPSF6	ENST00000266679.8	2229	11	-73	-1330	6	1330	multi-exon	FALSE	canonical	1	88153	junction_5	351623.03070886864	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	105	1871	20.0	-7842	False	NA	NA
PB.2753.3	chr12	+	5083	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	21	1512	-14	-1322	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	90	1745	10.0	-7827	False	AATATA	-25
PB.7948.5	chr3	-	7084	41	novel_not_in_catalog	NUP210	novel	7193	40	NA	NA	54	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	175849.44876878167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1887	5664	30	5693	20.0	36	True	AATAAA	-18
PB.2753.1	chr12	+	6607	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	5	4	5	-4	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	3	NA	TRUE	NA	NA	NA	C	coding	551	1656	106	1761	20.0	-7843	False	AATAAA	-14
PB.11244.12	chr8	+	2701	16	full-splice_match	INTS8	ENST00000523321.5	2916	16	-20	235	-3	-235	multi-exon	FALSE	canonical	1	164843	junction_1	66478.89646443365	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	146	2236	25.0	-9	True	AGTAAA	-14
PB.6984.2	chr2	-	8092	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-874	-419007	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	5	NA	TRUE	NA	NA	NA	B	coding	300	903	194	1096	85.0	0	True	NA	NA
PB.11274.6	chr8	-	2747	16	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	32961	junction_15	1968939.3048452076	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	392	2302	15.0	-2	True	AATAAA	-17
PB.2753.8	chr12	+	4113	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	32	2471	-3	1948	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	79	1734	45.0	-3	True	GATAAA	-17
PB.2753.9	chr12	+	3445	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	41	3130	6	1289	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	70	1725	25.0	6	True	TTTAAA	-12
PB.6260.1	chr19	-	6255	3	full-splice_match	ZNF814	ENST00000435989.6	3146	3	-13	-3096	-13	0	multi-exon	FALSE	canonical	1	27369	junction_1	18103.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	855	2568	249	2816	10.0	-19	False	AATAAA	-15
PB.2448.8	chr12	-	3454	10	full-splice_match	SLC2A3	ENST00000075120.11	3915	10	89	372	0	-371	multi-exon	FALSE	canonical	1	171375	junction_5	261639.348688558	NA	6	NA	TRUE	NA	NA	NA	C	coding	496	1491	153	1643	55.0	0	True	NA	NA
PB.2448.5	chr12	-	2735	4	novel_not_in_catalog	SLC2A3	novel	3915	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	271499.5240626072	NA	3	1	TRUE	NA	NA	NA	C	coding	148	447	107	553	25.0	-1	True	AATAAA	-18
PB.2448.7	chr12	-	3616	10	full-splice_match	SLC2A3	ENST00000075120.11	3915	10	89	210	0	-209	multi-exon	FALSE	canonical	1	171375	junction_5	261639.348688558	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	153	1643	75.0	0	True	NA	NA
PB.7907.3	chr3	+	1693	5	full-splice_match	BHLHE40	ENST00000256495.3	3473	5	230	1550	-91	505	multi-exon	FALSE	canonical	1	1004030	junction_1	81628.33533461283	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	374	1612	25.0	0	True	AAAAAG	-28
PB.2448.1	chr12	-	3828	10	full-splice_match	SLC2A3	ENST00000075120.11	3915	10	88	-1	0	1	multi-exon	FALSE	canonical	1	171375	junction_5	261639.348688558	NA	2	NA	TRUE	NA	NA	NA	C	coding	496	1491	154	1644	20.0	-1	True	AATAAA	-20
PB.2448.2	chr12	-	3681	11	novel_not_in_catalog	SLC2A3	novel	3915	10	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	310217.1510383654	NA	2	NA	TRUE	NA	NA	NA	C	coding	496	1491	154	1644	20.0	-1	True	AATAAA	-20
PB.1284.2	chr10	+	2024	15	full-splice_match	PFKFB3	ENST00000379789.8	4157	15	-16	2149	-16	15	multi-exon	FALSE	canonical	1	69724	junction_1	149992.52820419666	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	81	1583	50.0	-3	True	ATTAAA	-23
PB.1284.3	chr10	+	4163	15	full-splice_match	PFKFB3	ENST00000379789.8	4157	15	-13	7	-13	6	multi-exon	FALSE	canonical	1	69724	junction_1	149992.52820419666	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	78	1580	55.0	0	True	AATAAA	-12
PB.8762.16	chr4	+	3963	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	244	242	179	5	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	128	1960	25.0	0	True	NA	NA
PB.1284.1	chr10	+	4011	14	novel_in_catalog	PFKFB3	novel	4157	15	NA	NA	-35	6	combination_of_known_junctions	FALSE	canonical	1	24551	junction_13	186713.9626419079	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	100	1428	55.0	-22	True	AATAAA	-12
PB.1284.6	chr10	+	4308	14	novel_in_catalog	PFKFB3	novel	4157	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24551	junction_13	166275.23956757496	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	330	1718	30.0	0	True	AATAAA	-19
PB.1284.7	chr10	+	3656	9	incomplete-splice_match	PFKFB3	ENST00000379775.8	4483	15	16637	0	-1836	0	5prime_fragment	FALSE	canonical	1	271655	junction_8	113085.90211179067	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	53	1066	30.0	-6639	False	AATAAA	-19
PB.1284.4	chr10	+	4227	15	novel_not_in_catalog	PFKFB3	novel	4157	15	NA	NA	18	6	any annotated donor/acceptor	FALSE	canonical	1	579	junction_1	163208.63542617304	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	199	1644	55.0	-2	True	AATAAA	-12
PB.1284.5	chr10	+	4481	15	full-splice_match	PFKFB3	ENST00000379775.8	4483	15	1	1	0	-1	multi-exon	FALSE	canonical	1	233504	junction_1	123383.45988506394	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	330	1892	35.0	0	True	AATAAA	-18
PB.10946.12	chr7	+	2739	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	102	169	-11	-167	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	218	943	55.0	0	True	NA	NA
PB.7411.12	chr20	+	2598	7	novel_not_in_catalog	BIRC7	novel	1302	7	NA	NA	64	-1	any annotated donor/acceptor	FALSE	canonical	1	558	junction_5	11067.31169430449	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	771	1283	25.0	14	True	AATAAA	-20
PB.7411.10	chr20	+	3626	6	novel_in_catalog	BIRC7	novel	1302	7	NA	NA	26	2160	intron_retention	FALSE	canonical	1	13620	junction_1	5218.807143399726	NA	3	NA	TRUE	NA	NA	NA	C	coding	224	675	189	863	50.0	-24	True	AATAAA	-19
PB.5274.4	chr17	-	1682	7	full-splice_match	JMJD6	ENST00000542934.5	1898	7	209	7	15	0	multi-exon	TRUE	canonical	1	27096	junction_3	190850.91643952238	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	101	1186	20.0	4	True	AATAAA	-17
PB.5274.3	chr17	-	2872	5	novel_in_catalog	JMJD6	novel	5303	7	NA	NA	31	1	intron_retention	FALSE	canonical	1	348165	junction_4	71832.5553022444	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	85	1029	20.0	9934	False	AATAAA	-18
PB.5274.2	chr17	-	1594	6	full-splice_match	JMJD6	ENST00000397625.8	1603	6	9	0	9	0	multi-exon	FALSE	canonical	1	348165	junction_5	69013.78299267474	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	107	1318	20.0	-2	True	AATAAA	-17
PB.5274.1	chr17	-	2390	7	novel_not_in_catalog	JMJD6	novel	5303	7	NA	NA	-35	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	164211.45026628187	NA	5	1	TRUE	NA	NA	NA	C	coding	403	1212	64	1275	10.0	-6	True	AATAAA	-14
PB.6412.5	chr2	-	6560	35	novel_in_catalog	HEATR5B	novel	433	2	NA	NA	-35	-113	no_combination_of_known_junctions	FALSE	canonical	1	7527	junction_4	47830.07362113235	NA	2	NA	TRUE	NA	NA	NA	C	coding	1982	5949	132	6080	30.0	-52	True	AATAAA	-20
PB.11192.1	chr8	+	2958	15	full-splice_match	CRISPLD1	ENST00000262207.8	4287	15	75	1254	-12	463	multi-exon	FALSE	canonical	1	77181	junction_1	22056.670866064025	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	394	1896	15.0	-1425	False	ATTAAA	-22
PB.541.6	chr1	+	2119	15	full-splice_match	MTF2	ENST00000370298.8	4125	15	43	1963	-2	-14	multi-exon	FALSE	canonical	1	244090	junction_10	51950.578808623686	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	247	2028	85.0	-2	True	NA	NA
PB.10946.15	chr7	+	2431	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	102	477	-11	-475	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	218	943	30.0	0	True	AGTAAA	-15
PB.10946.16	chr7	+	2215	6	full-splice_match	INSIG1	ENST00000340368.8	3010	6	103	692	-10	583	multi-exon	FALSE	canonical	1	565200	junction_1	405701.48275035917	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	217	942	20.0	1	True	TATAAA	-21
PB.11822.3	chr9	+	4114	12	incomplete-splice_match	CERCAM	ENST00000372842.5	5201	14	9075	7	360	0	5prime_fragment	FALSE	canonical	1	408652	junction_7	88823.14029399067	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	2065	3618	45.0	-18	True	AATAAA	-16
PB.9874.38	chr6	-	3603	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	-6	-13	combination_of_known_junctions	FALSE	canonical	1	24881	junction_24	542660.8602598609	NA	2	NA	TRUE	NA	NA	NA	C	coding	1126	3381	134	3514	10.0	4	True	AATAAA	-17
PB.274.2	chr1	-	897	3	full-splice_match	TMEM35B	ENST00000373337.3	922	3	26	-1	26	1	multi-exon	FALSE	canonical	1	347247	junction_2	52301.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	23	487	10.0	-23	True	NA	NA
PB.4682.3	chr17	+	1889	13	novel_in_catalog	ARRB2	novel	1895	15	NA	NA	6	0	intron_retention	FALSE	canonical	1	221733	junction_1	296410.82299328333	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	666	1391	10.0	1	True	AATAAA	-14
PB.4682.2	chr17	+	1875	14	novel_in_catalog	ARRB2	novel	1895	15	NA	NA	46	-4	combination_of_known_junctions	FALSE	canonical	1	18858	junction_12	349413.15932566253	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	733	1422	20.0	-9532	False	AATAAA	-10
PB.317.1	chr1	+	2056	14	full-splice_match	MFSD2A	ENST00000372811.9	2154	14	17	81	1	-81	multi-exon	FALSE	canonical	1	79834	junction_1	48438.817376809544	NA	1	NA	TRUE	NA	NA	NA	A	coding	530	1593	147	1739	25.0	-1	True	NA	NA
PB.541.7	chr1	+	2565	15	full-splice_match	MTF2	ENST00000370298.8	4125	15	45	1515	0	415	multi-exon	FALSE	canonical	1	244090	junction_10	51950.578808623686	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	245	2026	20.0	0	True	AATATA	-18
PB.4682.1	chr17	+	1736	14	full-splice_match	ARRB2	ENST00000574954.5	1348	14	15	-403	2	0	multi-exon	FALSE	canonical	1	221733	junction_1	285121.0315362303	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	623	1276	10.0	-37	True	AATAAA	-17
PB.8762.14	chr4	+	2269	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	24	2156	24	-1909	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	171	2180	40.0	0	True	TATAAA	-23
PB.3065.9	chr13	-	3332	5	novel_not_in_catalog	RNF6	novel	1105	6	NA	NA	8	-5	any annotated donor/acceptor	FALSE	canonical	1	5245	junction_1	118445.0355460287	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	1692	2288	40.0	-31	True	AATAAA	-8
PB.3869.7	chr15	+	1604	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	13	6638	13	-2037	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	269	1327	30.0	-143	False	AATACA	-16
PB.3065.1	chr13	-	3676	5	novel_in_catalog	RNF6	novel	1105	6	NA	NA	-49	-8	combination_of_known_junctions	FALSE	canonical	1	30232	junction_4	119117.19761856388	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	578	2635	50.0	3	True	AATAAA	-5
PB.1614.4	chr10	-	2330	11	full-splice_match	LDB1	ENST00000361198.9	2285	11	-56	11	-56	-11	multi-exon	FALSE	canonical	1	247290	junction_10	373518.7181879912	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	681	1808	60.0	-1	True	ATTAAA	-10
PB.3065.3	chr13	-	3620	5	novel_not_in_catalog	RNF6	novel	1105	6	NA	NA	-60	4	any annotated donor/acceptor	FALSE	canonical	1	5245	junction_1	115791.15536818863	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	1958	2554	5.0	-8	True	AATAAA	-30
PB.3065.2	chr13	-	3343	5	full-splice_match	RNF6	ENST00000381588.8	3706	5	348	15	-56	-8	multi-exon	FALSE	canonical	1	132688	junction_4	87645.13716402069	NA	1	NA	TRUE	NA	NA	NA	C	coding	685	2058	245	2302	50.0	168	False	AATAAA	-5
PB.3065.5	chr13	-	3742	5	novel_not_in_catalog	RNF6	novel	1105	6	NA	NA	-20	-2	any annotated donor/acceptor	FALSE	canonical	1	5245	junction_1	127769.02521933867	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	2086	2682	15.0	32	True	AATAAA	-24
PB.3065.4	chr13	-	2573	6	novel_not_in_catalog	RNF6	novel	1105	6	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	1	17891	junction_1	117144.4794031712	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	162	692	15.0	-38	True	AATAAA	-22
PB.3065.7	chr13	-	2826	6	novel_not_in_catalog	RNF6	novel	1105	6	NA	NA	-58	-2	any annotated donor/acceptor	FALSE	canonical	1	17891	junction_1	112981.63896385996	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	419	949	20.0	-6	True	AATAAA	-18
PB.4682.6	chr17	+	1767	15	full-splice_match	ARRB2	ENST00000269260.6	1895	15	156	-28	2	0	multi-exon	FALSE	canonical	1	296417	junction_1	279723.6279658688	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	78	1307	10.0	-37	True	AATAAA	-17
PB.11096.10	chr8	-	3295	18	novel_in_catalog	FGFR1	novel	6216	22	NA	NA	-1	-21	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	315392.9109639897	NA	1	NA	TRUE	NA	NA	NA	C	coding	733	2202	335	2536	90.0	1970	False	NA	NA
PB.1701.1	chr10	+	1634	7	full-splice_match	LHPP	ENST00000368842.9	1622	7	-13	1	-12	-1	multi-exon	FALSE	canonical	1	158742	junction_1	41287.519296594546	NA	0	NA	TRUE	NA	NA	NA	A	coding	270	813	42	854	15.0	-1	True	AGTAAA	-17
PB.4682.5	chr17	+	1797	15	novel_in_catalog	ARRB2	novel	1895	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	18858	junction_13	338159.0159655676	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	75	1340	10.0	-34	True	AATAAA	-14
PB.1022.18	chr1	+	5119	33	full-splice_match	PTPRC	ENST00000442510.7	5390	33	75	196	9	-3	multi-exon	FALSE	canonical	1	197273	junction_3	370576.94417771033	NA	0	NA	TRUE	NA	NA	NA	C	coding	1306	3921	100	4020	30.0	-13	True	AATAAA	-28
PB.2472.1	chr12	-	1822	2	full-splice_match	MANSC1	ENST00000545735.1	1501	2	127	-448	127	0	multi-exon	FALSE	canonical	1	262932	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	350	1053	8	1060	30.0	9	True	AATAAA	-14
PB.1022.16	chr1	+	3517	31	novel_in_catalog	PTPRC	novel	731	7	NA	NA	0	-1299	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	349674.0612626183	NA	1	NA	TRUE	NA	NA	NA	C	coding	1127	3381	136	3516	55.0	-49	True	AGTAAA	-15
PB.1022.17	chr1	+	5348	33	full-splice_match	PTPRC	ENST00000442510.7	5390	33	39	3	0	-3	multi-exon	FALSE	canonical	1	197273	junction_3	370576.94417771033	NA	2	1	TRUE	NA	NA	NA	C	coding	1306	3921	136	4056	30.0	-49	True	AATAAA	-14
PB.1022.14	chr1	+	4956	31	novel_in_catalog	PTPRC	novel	731	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	349674.0612626183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	85	3663	35.0	2	True	AATAAA	-15
PB.4682.4	chr17	+	2399	14	novel_in_catalog	ARRB2	novel	1895	15	NA	NA	-12	0	intron_retention	FALSE	canonical	1	296417	junction_1	276866.58376752614	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	1289	1942	10.0	-9449	False	AATAAA	-14
PB.8762.15	chr4	+	4059	16	novel_in_catalog	GUF1	novel	3970	16	NA	NA	25	2	combination_of_known_junctions	FALSE	canonical	1	8926	junction_14	70007.63037256883	NA	3	1	TRUE	NA	NA	NA	C	coding	629	1890	170	2059	25.0	1	True	NA	NA
PB.1022.13	chr1	+	2197	21	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	324665.474088095	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2055	141	2195	25.0	-54	True	NA	NA
PB.533.10	chr1	-	4865	6	full-splice_match	ZNF644	ENST00000337393.9	5763	6	127	771	-47	112	multi-exon	FALSE	canonical	1	100675	junction_5	72882.7609778883	NA	2	NA	TRUE	NA	NA	NA	C	coding	1302	3909	232	4140	35.0	161	False	AATAAA	-24
PB.1022.11	chr1	+	2697	25	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-5	-6303	no_combination_of_known_junctions	FALSE	canonical	1	5851	junction_9	348707.38730892655	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2556	141	2696	75.0	-54	True	NA	NA
PB.3645.15	chr14	-	6202	29	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-10	-12	combination_of_known_junctions	FALSE	canonical	1	37694	junction_28	85094.55519312211	NA	0	NA	TRUE	NA	NA	NA	C	coding	1912	5739	446	6184	80.0	7144	False	TTTAAA	-5
PB.3645.14	chr14	-	6373	29	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-25	-3	combination_of_known_junctions	FALSE	canonical	1	37694	junction_28	85094.55519312211	NA	3	NA	TRUE	NA	NA	NA	C	coding	1912	5739	461	6199	40.0	7	True	AATAAA	-19
PB.3413.4	chr14	-	1859	1	novel_in_catalog	DNAAF2	novel	2963	3	NA	NA	909	-7289	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	187	564	700	1263	95.0	944	False	NA	NA
PB.3645.16	chr14	-	6187	29	novel_in_catalog	DICER1	novel	10277	27	NA	NA	-92	-12	no_combination_of_known_junctions	FALSE	canonical	1	5198	junction_28	88146.99778468965	NA	2	1	TRUE	NA	NA	NA	C	coding	1912	5739	431	6169	80.0	6998	False	TTTAAA	-5
PB.3413.2	chr14	-	2052	3	full-splice_match	DNAAF2	ENST00000298292.12	2963	3	908	3	908	-3	multi-exon	FALSE	canonical	1	131111	junction_2	922.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	328	987	701	1687	30.0	943	False	AATAAA	-17
PB.3413.3	chr14	-	1732	3	full-splice_match	DNAAF2	ENST00000298292.12	2963	3	1228	3	1228	-3	multi-exon	FALSE	canonical	1	131111	junction_2	922.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	381	1367	30.0	-29	True	AATAAA	-17
PB.3645.13	chr14	-	6299	27	full-splice_match	DICER1	ENST00000343455.7	10277	27	-109	4087	-45	6	multi-exon	FALSE	canonical	1	56664	junction_26	71003.36729294175	NA	0	NA	TRUE	NA	NA	NA	C	coding	1912	5739	378	6116	30.0	-3	True	AATAAA	-28
PB.3413.1	chr14	-	1892	2	full-splice_match	DNAAF2	ENST00000406043.3	2819	2	924	3	924	-3	multi-exon	FALSE	canonical	1	94193	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	685	1527	30.0	959	False	AATAAA	-17
PB.6002.3	chr19	-	2080	9	novel_in_catalog	C19orf47	novel	3628	9	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	85538	junction_8	62661.93067166061	NA	0	NA	TRUE	NA	NA	NA	B	coding	385	1158	107	1264	25.0	-7	True	AATATA	-15
PB.6002.2	chr19	-	2317	11	novel_not_in_catalog	C19orf47	novel	3628	9	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	999	junction_4	99549.71749251727	NA	2	NA	TRUE	NA	NA	NA	B	coding	281	846	656	1501	25.0	1	True	AATATA	-15
PB.6002.1	chr19	-	2053	9	novel_not_in_catalog	C19orf47	novel	3628	9	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_8	98164.6004601455	NA	3	1	TRUE	NA	NA	NA	B	coding	406	1221	12	1232	15.0	-11	True	AATATA	-20
PB.9908.6	chr6	+	2968	2	intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3511	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	0.0	-21	True	NA	NA
PB.8313.8	chr3	-	3248	6	novel_in_catalog	IGSF11	novel	3525	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	674	junction_3	13161.591119617719	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	307	1362	45.0	59	False	AATAAA	-14
PB.3645.18	chr14	-	6052	28	novel_in_catalog	DICER1	novel	10277	27	NA	NA	9	-12	no_combination_of_known_junctions	FALSE	canonical	1	19677	junction_23	96101.49864285115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1733	5202	833	6034	80.0	-4	True	TTTAAA	-5
PB.605.1	chr1	-	1829	3	full-splice_match	LAMTOR5	ENST00000464240.1	1830	3	0	1	0	-1	multi-exon	FALSE	canonical	1	1852295	junction_2	155120.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-20
PB.605.2	chr1	-	611	4	full-splice_match	LAMTOR5	ENST00000602318.5	634	4	19	4	5	0	multi-exon	FALSE	canonical	1	1852295	junction_2	155961.55834335872	NA	0	NA	TRUE	NA	NA	NA	C	coding	91	276	70	345	35.0	4	True	AATAAA	-13
PB.8762.12	chr4	+	4426	17	full-splice_match	GUF1	ENST00000281543.5	4449	17	24	-1	24	1	multi-exon	FALSE	canonical	1	92972	junction_1	47222.24692014877	NA	3	NA	TRUE	NA	NA	NA	C	coding	669	2010	171	2180	15.0	0	True	ATTAAA	-14
PB.533.13	chr1	-	3584	4	novel_in_catalog	ZNF644	novel	5702	6	NA	NA	9	-40	intron_retention	FALSE	canonical	1	25808	junction_3	83976.13047500793	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3174	410	3583	70.0	29	True	NA	NA
PB.9617.2	chr5	-	4432	13	novel_in_catalog	FBXW11	novel	4539	13	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	23276	junction_11	93409.60470701518	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	521	1855	30.0	1	True	AATAAA	-17
PB.9617.3	chr5	-	4225	13	full-splice_match	FBXW11	ENST00000296933.10	4539	13	236	78	3	-75	multi-exon	FALSE	canonical	1	66815	junction_12	82545.38258941764	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	136	1725	25.0	0	True	AATAAA	-28
PB.9617.1	chr5	-	4495	14	full-splice_match	FBXW11	ENST00000523843.5	2099	14	-20	-2376	-10	1	multi-exon	FALSE	canonical	1	34585	junction_12	93839.83665226126	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	387	1919	30.0	0	True	AATAAA	-16
PB.9617.6	chr5	-	4369	13	novel_in_catalog	FBXW11	novel	4539	13	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	570	junction_11	105013.51278036663	NA	65	3	TRUE	NA	NA	NA	C	coding	444	1335	459	1793	30.0	-1	True	AATAAA	-16
PB.8784.10	chr4	+	2083	7	novel_not_in_catalog	TMEM165	novel	828	3	NA	NA	1	3	any annotated donor/acceptor	FALSE	canonical	1	6046	junction_1	542906.0730088482	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	743	1360	0.0	1	True	AATAAA	-17
PB.9617.4	chr5	-	4455	12	full-splice_match	FBXW11	ENST00000393802.6	2181	12	-205	-2069	18	0	multi-exon	FALSE	canonical	1	83976	junction_11	73114.78246672847	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	354	1880	30.0	17	True	AATAAA	-15
PB.618.5	chr1	-	2799	14	full-splice_match	ST7L	ENST00000343210.11	1866	14	59	-992	-4	992	multi-exon	FALSE	canonical	1	50200	junction_3	39073.025387685884	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	18	1685	35.0	-6	True	AATGAA	-18
PB.9617.9	chr5	-	4315	14	full-splice_match	FBXW11	ENST00000523843.5	2099	14	0	-2216	0	-159	multi-exon	FALSE	canonical	1	34585	junction_12	93839.83665226126	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	367	1899	65.0	-12	True	NA	NA
PB.7342.22	chr20	-	3135	12	full-splice_match	STAU1	ENST00000371802.5	3154	12	16	3	16	-3	multi-exon	FALSE	canonical	1	38259	junction_11	341589.6913228157	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	275	1783	30.0	139	False	AATAAA	-11
PB.10761.10	chr7	+	2150	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	30	292	-1	-292	multi-exon	FALSE	canonical	1	810846	junction_1	220709.79580775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	9	1478	20.0	4	True	TATAAA	-14
PB.7342.23	chr20	-	3133	12	full-splice_match	STAU1	ENST00000347458.9	3136	12	0	3	0	-3	multi-exon	FALSE	canonical	1	38259	junction_11	300931.78258274705	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	291	1781	30.0	-1	True	AATAAA	-11
PB.533.12	chr1	-	3876	5	novel_not_in_catalog	ZNF644	novel	5702	6	NA	NA	-19	-40	intron_retention	FALSE	canonical	1	21464	junction_3	87354.48719585045	NA	1	NA	TRUE	NA	NA	NA	C	coding	1058	3174	702	3875	70.0	1	True	NA	NA
PB.5158.14	chr17	-	5245	35	novel_not_in_catalog	USP32	novel	5171	34	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	1931	junction_14	138836.87535888545	NA	0	NA	TRUE	NA	NA	NA	C	coding	1634	4905	197	5101	50.0	-6	True	AATAAA	-11
PB.7342.21	chr20	-	3217	13	full-splice_match	STAU1	ENST00000371828.7	3411	13	9	185	9	-3	multi-exon	FALSE	canonical	1	120591	junction_8	285348.06325355626	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	357	1865	30.0	8	True	AATAAA	-11
PB.98.3	chr1	-	2005	4	novel_not_in_catalog	KIAA2013	novel	2815	3	NA	NA	6	115	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	154852.8645851352	NA	0	NA	TRUE	NA	NA	NA	B	coding	316	951	808	1758	45.0	9	True	AATAAA	-16
PB.12256.5	chrX	-	4027	24	full-splice_match	SMARCA1	ENST00000371123.5	3948	24	-84	5	-69	-5	multi-exon	FALSE	canonical	1	103366	junction_12	97202.28383043555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	200	3376	35.0	-80	False	AATAAA	-13
PB.7342.26	chr20	-	3477	15	novel_in_catalog	STAU1	novel	3684	14	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	15698	junction_13	357418.9401829955	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	516	2126	30.0	-2	True	AATAAA	-10
PB.229.2	chr1	-	1104	6	full-splice_match	TAF12	ENST00000373824.8	1334	6	-19	249	0	2	multi-exon	FALSE	canonical	1	344347	junction_5	108210.03436539516	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	179	664	40.0	5183	False	AATAAA	-15
PB.7342.27	chr20	-	3327	14	novel_in_catalog	STAU1	novel	3684	14	NA	NA	21	-4	intron_retention	FALSE	canonical	1	36478	junction_13	347796.47313619545	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	468	1976	30.0	-13	True	AATAAA	-10
PB.1299.12	chr10	+	3514	15	full-splice_match	OPTN	ENST00000378747.7	3400	15	-100	-14	-34	-3	multi-exon	FALSE	canonical	1	122718	junction_2	351721.3364035439	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	342	2075	35.0	-38	True	ATTAAA	-16
PB.1299.13	chr10	+	2161	14	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-32	-5	combination_of_known_junctions	FALSE	canonical	1	239162	junction_5	292647.5408105079	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	188	1903	40.0	-36	True	NA	NA
PB.1299.10	chr10	+	3497	15	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-35	-3	combination_of_known_junctions	FALSE	canonical	1	122718	junction_2	385536.581035835	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	343	2058	35.0	-39	True	ATTAAA	-16
PB.1299.11	chr10	+	2184	16	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	1	49949	junction_3	399422.1493964945	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	397	2130	15.0	-39	True	NA	NA
PB.1299.16	chr10	+	2175	16	full-splice_match	OPTN	ENST00000378748.7	3521	16	-25	1371	-11	2	multi-exon	FALSE	canonical	1	20360	junction_3	403151.9244547009	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	388	2121	15.0	-15	True	NA	NA
PB.1299.17	chr10	+	3311	14	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	239162	junction_5	292647.5408105079	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	157	1872	35.0	-5	True	ATTAAA	-16
PB.1299.14	chr10	+	1955	14	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	1	239162	junction_5	292647.5408105079	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	185	1900	15.0	-33	True	NA	NA
PB.1299.15	chr10	+	1960	14	full-splice_match	OPTN	ENST00000378757.6	3321	14	-27	1388	-17	2	multi-exon	FALSE	canonical	1	553620	junction_1	225346.40283773188	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	173	1906	15.0	-21	True	NA	NA
PB.9922.5	chr6	-	2322	15	novel_not_in_catalog	WDR46	novel	872	4	NA	NA	11	-2	intron_retention	FALSE	canonical	1	4143	junction_5	248354.6062734694	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	67	1287	25.0	-11	True	ATTAAA	-19
PB.11403.1	chr8	+	3259	18	novel_not_in_catalog	KIFC2	novel	3566	18	NA	NA	-9	0	intron_retention	TRUE	canonical	1	28047	junction_1	131905.8382866498	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	1142	2533	15.0	-15	True	AATAAA	-15
PB.1299.18	chr10	+	2277	15	novel_in_catalog	OPTN	novel	2464	15	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	122718	junction_2	385536.581035835	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	304	2019	40.0	0	True	NA	NA
PB.10767.14	chr7	+	1910	13	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	0	-15	intron_retention	FALSE	canonical	1	243514	junction_1	103047.36018004725	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1467	444	1910	80.0	2	True	NA	NA
PB.10767.13	chr7	+	2125	15	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	0	-15	intron_retention	FALSE	canonical	1	3901	junction_3	187792.688397529	NA	6	1	TRUE	NA	NA	NA	C	coding	489	1467	659	2125	80.0	2	True	NA	NA
PB.1417.6	chr10	+	3662	7	full-splice_match	UBE2D1	ENST00000373910.8	2659	7	33	-1036	29	1036	multi-exon	FALSE	canonical	1	256332	junction_1	91249.69059567027	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	195	638	45.0	2	True	AATAAA	-14
PB.10767.11	chr7	+	2294	16	incomplete-splice_match	KMT2E	ENST00000311117.7	6874	27	25	12609	-2	-2	3prime_fragment	FALSE	canonical	1	94944	junction_2	142953.29940782135	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1773	521	2293	70.0	-1	True	AAGAAA	-40
PB.10767.10	chr7	+	2845	17	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	-3	2991	intron_retention	FALSE	canonical	1	243514	junction_1	101133.95820718352	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2397	448	2844	75.0	-2	True	NA	NA
PB.11429.1	chr9	-	9139	17	full-splice_match	RFX3	ENST00000617270.4	9253	17	114	0	96	0	multi-exon	FALSE	canonical	1	38075	junction_12	12197.9776703392	NA	10	NA	TRUE	NA	NA	NA	C	coding	749	2250	150	2399	40.0	0	True	AATAAA	-17
PB.11429.3	chr9	-	4280	17	full-splice_match	RFX3	ENST00000617270.4	9253	17	83	4890	65	-4890	multi-exon	FALSE	canonical	1	38075	junction_12	12197.9776703392	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	181	2430	75.0	29	True	AAGAAA	-43
PB.11429.2	chr9	-	4372	17	novel_not_in_catalog	RFX3	novel	9307	18	NA	NA	1263	-4867	any annotated donor/acceptor	FALSE	canonical	1	1344	junction_16	17826.340326426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	220	2499	75.0	2190	False	AATAAA	-15
PB.1819.47	chr11	-	4571	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	3229390	junction_20	1142753.477213361	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	1706	3811	15.0	-8	True	AATAAA	-14
PB.12331.2	chrX	+	3669	10	full-splice_match	ABCD1	ENST00000218104.5	3664	10	-12	7	-12	-7	multi-exon	TRUE	canonical	1	115317	junction_1	32217.860305530325	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	412	2649	10.0	0	True	AGTAAA	-29
PB.11429.6	chr9	-	3149	1	novel_in_catalog	RFX3	novel	9307	18	NA	NA	-19458	6036	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	1863	False	NA	NA
PB.5770.2	chr19	+	1850	1	full-splice_match	IER2	ENST00000588173.1	2934	1	1079	5	1079	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	223	672	134	805	25.0	-1	True	AATAAA	-14
PB.5770.3	chr19	+	1706	1	full-splice_match	IER2	ENST00000588173.1	2934	1	1222	6	1222	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	213	642	21	662	30.0	-2089	False	AATAAA	-13
PB.1819.49	chr11	-	3603	22	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	4383	junction_5	2042055.26541261	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	927	2843	15.0	-1	True	AATAAA	-14
PB.1819.48	chr11	-	3665	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	8779	junction_20	1622913.2423760141	NA	1	NA	TRUE	NA	NA	NA	C	coding	701	2106	800	2905	15.0	-1	True	AATAAA	-14
PB.10450.11	chr7	+	2483	7	novel_not_in_catalog	SNX10	novel	2613	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	2922	junction_5	131058.90690830593	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	188	508	50.0	-1112	False	ATTAAA	-5
PB.10078.3	chr6	-	1964	3	full-splice_match	TENT5A	ENST00000320172.10	5609	3	31	3614	31	526	multi-exon	FALSE	canonical	1	103487	junction_2	45074.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	433	1302	312	1613	65.0	3	True	NA	NA
PB.7110.56	chr2	+	5421	9	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	2	-1	intron_retention	FALSE	canonical	1	19559	junction_1	1088827.7091295181	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	2751	3335	25.0	-20	True	AATAAA	-19
PB.11790.17	chr9	+	3198	18	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-5	0	intron_retention	FALSE	canonical	1	29234	junction_2	75629.5736612334	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2979	218	3196	80.0	-2	True	NA	NA
PB.8762.11	chr4	+	4213	17	novel_not_in_catalog	GUF1	novel	3970	16	NA	NA	20	-4	any annotated donor/acceptor	FALSE	canonical	1	1033	junction_2	69173.60430013094	NA	28	NA	TRUE	NA	NA	NA	C	coding	345	1038	1182	2219	20.0	-4	True	NA	NA
PB.2676.1	chr12	+	2427	1	antisense	novelGene_PAN2_AS_novelGene_AC073896.1_AS_novelGene_CNPY2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	GATAAA	-12
PB.533.14	chr1	-	2275	3	full-splice_match	ZNF644	ENST00000498303.5	514	3	-48	-1713	-48	-1353	multi-exon	FALSE	canonical	1	100675	junction_2	33703.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2043	233	2275	55.0	160	False	AAAACA	-12
PB.7110.57	chr2	+	1854	14	full-splice_match	SEPT2	ENST00000402092.6	3333	14	3	1476	3	-75	multi-exon	FALSE	canonical	1	7694	junction_1	1028736.5949458095	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	155	1240	35.0	-15	True	AATAAA	-16
PB.1424.2	chr10	+	3634	2	incomplete-splice_match	ARID5B	ENST00000309334.5	3141	7	145	38671	145	-2875	3prime_fragment	FALSE	canonical	1	141812	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	75	228	125	352	70.0	-1	True	NA	NA
PB.683.10	chr1	-	1419	6	full-splice_match	LIX1L	ENST00000604000.3	3975	6	-13	2569	-13	-2569	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	88	1101	20.0	0	True	ACTAAA	-18
PB.7110.54	chr2	+	5328	9	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	56559	junction_2	1142000.4796432813	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	2657	3241	25.0	-21	True	AATAAA	-20
PB.87.12	chr1	+	2860	7	novel_in_catalog	TARDBP	novel	701	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	6649	junction_3	452567.0074182999	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	103	1470	10.0	-5	True	AATAAA	-16
PB.458.2	chr1	+	3640	11	novel_not_in_catalog	PDE4B	novel	3998	17	NA	NA	-249	-2	any annotated donor/acceptor	FALSE	canonical	1	4117	junction_1	96279.23525371397	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	188	1741	20.0	-8110	False	AATAAA	-18
PB.484.2	chr1	-	4259	24	novel_in_catalog	USP33	novel	4327	24	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	102471	junction_11	95059.31663399698	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	221	2932	40.0	-1	True	AATAAA	-18
PB.98.1	chr1	-	2693	4	novel_not_in_catalog	KIAA2013	novel	2815	3	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	154852.8645851352	NA	0	NA	TRUE	NA	NA	NA	B	coding	634	1905	66	1970	10.0	24	True	AATAAA	-17
PB.8131.8	chr3	-	1840	11	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	21833	junction_9	259540.28531580602	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	286	1392	10.0	-2	True	ATTAAA	-18
PB.610.9	chr1	-	1463	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	-44	216	combination_of_known_junctions	FALSE	canonical	1	110333	junction_9	242372.59645038	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	411	1211	30.0	0	True	AATAAA	-15
PB.484.3	chr1	-	4660	26	novel_not_in_catalog	USP33	novel	4327	24	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_24	134383.58985534508	NA	1	1	TRUE	NA	NA	NA	C	coding	942	2829	506	3334	40.0	21	False	AATAAA	-17
PB.610.7	chr1	-	3287	9	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	1	223	intron_retention	FALSE	canonical	1	110333	junction_8	236735.28490749825	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	2228	3028	25.0	143	False	AATAAA	-22
PB.2878.1	chr12	+	2231	3	full-splice_match	AC007569.1	ENST00000547282.1	303	3	0	-1928	0	1527	multi-exon	FALSE	canonical	1	6285	junction_2	7396.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	176	531	913	1443	25.0	0	True	ATTAAA	-21
PB.610.5	chr1	-	1883	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	29470	junction_8	288175.56930124864	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	256	1056	30.0	-1	True	AATAAA	-13
PB.1424.1	chr10	+	1368	9	incomplete-splice_match	ARID5B	ENST00000279873.11	7891	10	389	11095	5	-7215	3prime_fragment	FALSE	canonical	1	104683	junction_1	52348.31730282741	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1347	22	1368	75.0	-10	True	AAAACA	-40
PB.5496.1	chr18	-	3591	9	incomplete-splice_match	ALPK2	ENST00000361673.3	7303	13	92262	7	424	-7	5prime_fragment	FALSE	canonical	1	59125	junction_1	14438.494078331023	NA	0	NA	TRUE	NA	NA	NA	B	coding	788	2367	656	3022	45.0	4587	False	ATTAAA	-12
PB.610.1	chr1	-	1848	10	novel_in_catalog	DRAM2	novel	2246	9	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	29470	junction_8	279186.4700799958	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	218	1018	25.0	-8	True	AATAAA	-16
PB.12256.9	chrX	-	3836	25	novel_in_catalog	SMARCA1	novel	4291	23	NA	NA	-24	85	no_combination_of_known_junctions	FALSE	canonical	1	78159	junction_1	105297.84342262949	NA	3	NA	TRUE	NA	NA	NA	C	coding	1048	3147	155	3301	25.0	-35	False	ATTAAA	-14
PB.484.1	chr1	-	4484	25	full-splice_match	USP33	ENST00000370793.5	4502	25	19	-1	13	1	multi-exon	TRUE	canonical	1	57	junction_24	117413.2322318864	NA	0	NA	TRUE	NA	NA	NA	C	coding	942	2829	329	3157	40.0	-23	True	AATAAA	-18
PB.533.17	chr1	-	1845	3	full-splice_match	ZNF644	ENST00000498303.5	514	3	-45	-1286	-45	1286	multi-exon	FALSE	canonical	1	100675	junction_2	33703.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1614	230	1843	70.0	163	False	NA	NA
PB.7110.50	chr2	+	4531	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	634146	junction_6	809024.815515395	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	1668	2444	25.0	-21	True	AATAAA	-20
PB.7110.51	chr2	+	3607	14	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-1	any annotated donor/acceptor	TRUE	canonical	1	6733	junction_6	1076179.0913821813	NA	13	1	TRUE	NA	NA	NA	C	coding	194	585	937	1521	25.0	-21	True	AATAAA	-19
PB.484.7	chr1	-	4417	24	novel_in_catalog	USP33	novel	4327	24	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	57	junction_23	136703.90024042907	NA	2	NA	TRUE	NA	NA	NA	C	coding	851	2556	366	2921	40.0	-1	True	AATAAA	-17
PB.10141.3	chr6	-	3377	7	novel_in_catalog	PDSS2	novel	3540	8	NA	NA	-12	-41	no_combination_of_known_junctions	FALSE	canonical	1	3275	junction_6	33519.987917658924	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	292	1356	80.0	-21	True	NA	NA
PB.8432.1	chr3	-	1950	5	full-splice_match	NMNAT3	ENST00000512391.5	794	5	-12	-1144	0	2	multi-exon	FALSE	canonical	1	7717	junction_1	9742.586755451552	NA	1	NA	TRUE	NA	NA	NA	A	coding	100	303	454	756	35.0	-1	True	AATAAA	-19
PB.8131.2	chr3	-	2261	11	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	4	-2	intron_retention	FALSE	canonical	1	517971	junction_10	126818.97084758259	NA	2	NA	TRUE	NA	NA	NA	C	coding	305	918	159	1076	15.0	-12	True	ATTAAA	-27
PB.8131.3	chr3	-	2159	10	novel_in_catalog	IFRD2	novel	2109	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	517971	junction_9	152701.7347708424	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	154	795	15.0	-7	True	ATTAAA	-27
PB.9958.2	chr6	-	2663	1	antisense	novelGene_SRSF3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.1729.1	chr10	-	1795	1	antisense	novelGene_MTG1_AS_novelGene_AL360181.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9958.1	chr6	-	3596	1	antisense	novelGene_SRSF3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10216.10	chr6	-	2089	12	novel_not_in_catalog	MOXD1	novel	3059	12	NA	NA	-6	-787	any annotated donor/acceptor	FALSE	canonical	1	2185	junction_11	78307.10356608199	NA	1	1	TRUE	NA	NA	NA	C	coding	578	1737	56	1792	25.0	-7	True	AATAAA	-18
PB.10216.11	chr6	-	2248	2	full-splice_match	MOXD1	ENST00000392401.3	2191	2	-59	2	11	-2	multi-exon	FALSE	canonical	1	2931	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	115	348	109	456	15.0	554	False	NA	NA
PB.11733.11	chr9	-	2380	12	incomplete-splice_match	FKBP15	ENST00000414250.1	2815	14	12	2891	12	-2891	3prime_fragment	FALSE	canonical	1	163856	junction_8	41964.189842931	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	64	1311	35.0	-11	True	NA	NA
PB.11171.6	chr8	+	1870	15	incomplete-splice_match	CSPP1	ENST00000262210.9	4367	29	10	58771	10	-21544	3prime_fragment	FALSE	canonical	1	45221	junction_1	31219.20819669473	NA	0	NA	TRUE	NA	NA	NA	B	coding	616	1848	22	1869	70.0	-14	True	NA	NA
PB.787.9	chr1	-	3432	13	novel_not_in_catalog	PYGO2	novel	594	3	NA	NA	-6894	-2661	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	459081.0676961701	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	174	1928	15.0	-1	True	ATTAAA	-16
PB.2529.2	chr12	-	1968	13	novel_in_catalog	CAPRIN2	novel	6543	15	NA	NA	-6	-22	combination_of_known_junctions	FALSE	canonical	1	2284	junction_12	57463.55141951336	NA	4	NA	TRUE	NA	NA	NA	B	coding	442	1326	641	1966	75.0	56	False	NA	NA
PB.2529.1	chr12	-	3799	19	novel_in_catalog	CAPRIN2	novel	6543	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11503	junction_18	66526.52066947288	NA	1	NA	TRUE	NA	NA	NA	B	coding	1046	3141	311	3451	20.0	-1	True	AATAAA	-13
PB.2690.4	chr12	-	4175	2	full-splice_match	ZBTB39	ENST00000300101.2	6170	2	-97	2092	-97	-2092	multi-exon	FALSE	canonical	1	34985	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	184	2322	15.0	-57	True	NA	NA
PB.2690.5	chr12	-	2453	2	full-splice_match	ZBTB39	ENST00000300101.2	6170	2	-99	3816	-99	-3816	multi-exon	FALSE	canonical	1	34985	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	186	2324	75.0	-59	True	NA	NA
PB.6464.4	chr2	-	1868	10	full-splice_match	ASB3	ENST00000263634.7	2214	10	8	338	8	0	multi-exon	FALSE	canonical	1	117747	junction_9	60054.00488531495	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	128	1684	100.0	7	True	NA	NA
PB.2690.1	chr12	-	6258	2	full-splice_match	ZBTB39	ENST00000300101.2	6170	2	-111	23	-111	-23	multi-exon	FALSE	canonical	1	34985	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	198	2336	70.0	-71	True	NA	NA
PB.2690.3	chr12	-	7675	1	genic	ZBTB39	novel	NA	NA	NA	NA	-85	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	712	2139	1615	3753	70.0	-45	True	NA	NA
PB.8243.2	chr3	+	2412	3	full-splice_match	C3orf38	ENST00000318887.7	2633	3	216	5	-28	-5	multi-exon	FALSE	canonical	1	203727	junction_2	6064.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	95	1084	35.0	-1	True	AATAAA	-27
PB.11266.2	chr8	+	4598	29	incomplete-splice_match	VPS13B	ENST00000357162.6	14019	62	5	366209	-3	-66414	3prime_fragment	FALSE	canonical	1	77907	junction_28	33310.876132856676	NA	0	NA	TRUE	NA	NA	NA	B	coding	1497	4491	107	4597	70.0	-3	True	NA	NA
PB.6701.1	chr2	+	2025	4	novel_in_catalog	PAX8-AS1	novel	1207	6	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	2866	junction_2	3079.3555963689687	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	3	398	10.0	-24	True	NA	NA
PB.8243.3	chr3	+	3572	3	novel_not_in_catalog	C3orf38	novel	2633	3	NA	NA	-60	-5	any annotated donor/acceptor	TRUE	canonical	1	6323	junction_1	18896.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	1822	2244	35.0	-910	False	AATAAA	-27
PB.798.1	chr1	-	3153	12	full-splice_match	FAM189B	ENST00000361361.6	3082	12	-60	-11	36	-1	multi-exon	FALSE	canonical	1	192276	junction_11	40379.06295459206	NA	1	NA	TRUE	NA	NA	NA	C	coding	667	2004	574	2577	30.0	35	True	AATAAA	-29
PB.8582.1	chr3	-	4858	13	full-splice_match	ETV5	ENST00000306376.9	4111	13	25	-772	-6	772	multi-exon	FALSE	canonical	1	44807	junction_12	67385.64660758419	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	223	1755	30.0	1	True	AATAAA	-22
PB.10817.4	chr7	-	3921	18	full-splice_match	POT1	ENST00000393329.5	3950	18	26	3	-13	-3	multi-exon	FALSE	canonical	1	29025	junction_12	54818.74384478107	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	838	2349	15.0	25	True	AATAAA	-14
PB.10817.7	chr7	-	2935	19	full-splice_match	POT1	ENST00000357628.7	4080	19	125	1020	-29	450	multi-exon	FALSE	canonical	1	63406	junction_18	42102.0198845379	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	475	2379	30.0	-32	True	AGTAAA	-19
PB.10817.6	chr7	-	3065	19	novel_in_catalog	POT1	novel	587	4	NA	NA	-14	598	combination_of_known_junctions	FALSE	canonical	1	34373	junction_18	46793.772390896076	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	457	2361	20.0	-17	True	AATAAA	-15
PB.10817.1	chr7	-	6477	19	full-splice_match	POT1	ENST00000357628.7	4080	19	156	-2553	0	2553	multi-exon	FALSE	canonical	1	63406	junction_18	42102.0198845379	NA	4	NA	TRUE	NA	NA	NA	C	coding	634	1905	444	2348	15.0	-1	True	ATTAAA	-40
PB.10817.3	chr7	-	3124	12	novel_in_catalog	POT1	novel	587	4	NA	NA	-123	0	intron_retention	TRUE	canonical	1	2173	junction_7	89823.92640996317	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	7	636	10.0	NA	False	AATAAA	-17
PB.10817.2	chr7	-	3954	19	full-splice_match	POT1	ENST00000357628.7	4080	19	125	1	-29	0	multi-exon	FALSE	canonical	1	63406	junction_18	42102.0198845379	NA	2	NA	TRUE	NA	NA	NA	C	coding	634	1905	475	2379	10.0	-32	True	AATAAA	-17
PB.8482.15	chr3	-	2975	5	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	34	-64524	intron_retention	FALSE	canonical	1	192471	junction_4	39397.022285954554	NA	0	NA	TRUE	NA	NA	NA	B	coding	383	1152	412	1563	45.0	-3	True	ATTAAA	-21
PB.8482.14	chr3	-	2398	4	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	42	-64519	intron_retention	FALSE	canonical	1	7980	junction_2	120414.08879455188	NA	1	NA	TRUE	NA	NA	NA	B	coding	448	1347	404	1750	45.0	5	True	ATTAAA	-26
PB.8482.17	chr3	-	3025	1	novel_in_catalog	SLC33A1	novel	2880	6	NA	NA	0	-6714	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	267	804	460	1263	90.0	-1	True	NA	NA
PB.8482.16	chr3	-	2499	5	full-splice_match	SLC33A1	ENST00000468581.2	3558	5	12	1047	2	194	multi-exon	FALSE	canonical	1	11622	junction_4	108839.67679688323	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	408	1415	55.0	1	True	ATTAAA	-8
PB.8482.11	chr3	-	2787	5	full-splice_match	SLC33A1	ENST00000644094.1	2546	5	-191	-50	5	50	multi-exon	FALSE	canonical	1	7060	junction_3	107132.67949224224	NA	2	NA	TRUE	NA	NA	NA	C	coding	336	1011	445	1455	25.0	14	False	AATAAA	-19
PB.10817.8	chr7	-	2728	19	full-splice_match	POT1	ENST00000357628.7	4080	19	128	1224	-26	246	multi-exon	FALSE	canonical	1	63406	junction_18	42102.0198845379	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	472	2376	25.0	-29	True	GATAAA	-19
PB.8482.13	chr3	-	2744	6	full-splice_match	SLC33A1	ENST00000643144.1	3749	6	-37	1042	3	-180	multi-exon	FALSE	canonical	1	192471	junction_5	35322.58717817821	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	447	2096	45.0	12	False	ATTAAA	-26
PB.8482.12	chr3	-	2652	4	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	18	-64289	intron_retention	FALSE	canonical	1	7980	junction_2	120414.08879455188	NA	1	NA	TRUE	NA	NA	NA	B	coding	448	1347	428	1774	25.0	-19	True	AATAAA	-19
PB.3536.4	chr14	+	6249	25	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	-26	-1	no_combination_of_known_junctions	FALSE	canonical	1	26112	junction_5	114482.82203177635	NA	3	NA	TRUE	NA	NA	NA	B	coding	1783	5352	659	6010	35.0	-53	True	AATAAA	-12
PB.4451.4	chr16	+	4395	6	novel_in_catalog	COQ9	novel	1827	3	NA	NA	2	-1	intron_retention	FALSE	canonical	1	296390	junction_1	193725.9088749876	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	23	811	20.0	2	True	AATAAA	-13
PB.3536.6	chr14	+	6204	26	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	16629	junction_4	122460.87700065518	NA	7	1	TRUE	NA	NA	NA	B	coding	1783	5352	673	6024	80.0	-11	True	NA	NA
PB.3536.7	chr14	+	7859	25	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	-6	-189	combination_of_known_junctions	FALSE	canonical	1	30065	junction_2	108266.89542578974	NA	2	1	TRUE	NA	NA	NA	B	coding	1783	5352	629	5980	35.0	-9	True	AATAAA	-22
PB.4451.1	chr16	+	4133	7	novel_in_catalog	COQ9	novel	1827	3	NA	NA	-3	2	intron_retention	FALSE	canonical	1	296390	junction_1	183517.54309458323	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	85	873	15.0	-60	False	AATAAA	-19
PB.3536.1	chr14	+	6211	25	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	30065	junction_2	108266.89542578974	NA	3	NA	TRUE	NA	NA	NA	B	coding	1783	5352	620	5971	35.0	0	True	AATAAA	-13
PB.4451.3	chr16	+	1633	9	full-splice_match	COQ9	ENST00000262507.10	1677	9	42	2	-3	-2	multi-exon	FALSE	canonical	1	287256	junction_6	189218.82140721197	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	28	984	15.0	-3	True	AATAAA	-20
PB.4451.2	chr16	+	2873	8	novel_in_catalog	COQ9	novel	1827	3	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	287256	junction_5	201877.3224386028	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	37	825	15.0	-12	False	AATAAA	-21
PB.8243.5	chr3	+	1366	3	full-splice_match	C3orf38	ENST00000318887.7	2633	3	216	1051	-28	-27	multi-exon	FALSE	canonical	1	203727	junction_2	6064.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	95	1084	25.0	-1	True	AATAAA	-17
PB.3536.8	chr14	+	6270	25	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	7756	junction_2	112418.31141111327	NA	1	NA	TRUE	NA	NA	NA	B	coding	1783	5352	676	6027	20.0	2	True	AATAAA	-16
PB.3536.9	chr14	+	5819	24	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	2	-1022	combination_of_known_junctions	FALSE	canonical	1	30065	junction_2	100085.92651836568	NA	0	NA	TRUE	NA	NA	NA	B	coding	1734	5202	618	5819	45.0	2	True	NA	NA
PB.3338.8	chr14	+	2258	11	novel_in_catalog	PCK2	novel	1804	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	7221	junction_1	218405.49693732528	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	577	2097	20.0	1	True	NA	NA
PB.3338.9	chr14	+	1962	9	novel_in_catalog	PCK2	novel	1804	10	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	36691	junction_6	178104.53355684128	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	95	1798	20.0	1	True	NA	NA
PB.11511.6	chr9	-	3087	1	novel_in_catalog	FAM219A	novel	3644	6	NA	NA	0	-53234	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.3338.1	chr14	+	2263	11	novel_in_catalog	PCK2	novel	1804	10	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	2309	junction_1	219344.899395541	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	578	2098	15.0	-388	False	NA	NA
PB.3338.2	chr14	+	1952	9	novel_in_catalog	PCK2	novel	1804	10	NA	NA	4	-2	no_combination_of_known_junctions	FALSE	canonical	1	13237	junction_1	227673.6466112185	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	487	1788	20.0	-34	True	NA	NA
PB.3338.3	chr14	+	2144	10	novel_in_catalog	PCK2	novel	1804	10	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	13237	junction_1	180082.6083662717	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	459	1979	15.0	-6	True	NA	NA
PB.3338.4	chr14	+	2632	10	full-splice_match	PCK2	ENST00000545054.6	2505	10	-33	-94	-13	0	multi-exon	FALSE	canonical	1	21527	junction_1	177755.50060965103	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	952	2472	25.0	-251	False	NA	NA
PB.3338.5	chr14	+	2179	10	full-splice_match	PCK2	ENST00000216780.8	2357	10	173	5	0	0	multi-exon	FALSE	canonical	1	342893	junction_3	92396.64230845482	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	96	2018	20.0	0	True	NA	NA
PB.3338.6	chr14	+	2084	9	novel_in_catalog	PCK2	novel	1804	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	51521	junction_8	161876.57947409927	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	96	1922	20.0	0	True	NA	NA
PB.3338.7	chr14	+	1850	10	novel_in_catalog	PCK2	novel	1804	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	34313	junction_9	165191.9115400234	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	96	1589	20.0	0	True	NA	NA
PB.9472.5	chr5	+	2754	18	novel_not_in_catalog	KIF20A	novel	631	5	NA	NA	0	2	intron_retention	FALSE	canonical	1	44	junction_10	135431.82039427795	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	56	1291	40.0	0	True	ATTAAA	-23
PB.2535.8	chr12	+	1501	1	full-splice_match	BICD1	ENST00000551848.1	1962	1	-30	491	-30	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	9	30	277	306	50.0	-42	True	TATAAA	-1
PB.2535.9	chr12	+	5999	7	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-422	37157	-28	1600	intron_retention	FALSE	canonical	1	67858	junction_5	14716.910100855637	NA	3	NA	TRUE	NA	NA	NA	C	coding	873	2622	526	3147	15.0	-40	True	NA	NA
PB.11301.5	chr8	+	2836	3	novel_in_catalog	PKHD1L1	novel	13076	78	NA	NA	-17	2346	no_combination_of_known_junctions	FALSE	canonical	1	2046	junction_2	29936.0	NA	6	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-13	True	AATAAA	-6
PB.2535.4	chr12	+	5039	8	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-431	37157	-37	1600	3prime_fragment	FALSE	canonical	1	7038	junction_7	34447.64245480201	NA	4	NA	TRUE	NA	NA	NA	C	coding	930	2793	535	3327	15.0	-49	True	NA	NA
PB.2535.5	chr12	+	3241	6	novel_in_catalog	BICD1	novel	1328	2	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	1	14503	junction_5	36934.452314336544	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	531	2684	20.0	-45	True	AATAAA	-21
PB.2535.6	chr12	+	2684	2	full-splice_match	BICD1	ENST00000550207.1	1328	2	-81	-1275	-31	798	multi-exon	FALSE	canonical	1	31847	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-43	True	AATAAA	-29
PB.2535.7	chr12	+	5073	7	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-425	38086	-31	671	intron_retention	FALSE	canonical	1	67858	junction_5	14716.910100855637	NA	2	NA	TRUE	NA	NA	NA	C	coding	873	2622	529	3150	75.0	-43	True	CATAAA	-43
PB.345.4	chr1	-	2503	10	full-splice_match	SLC2A1	ENST00000426263.8	3670	10	308	859	0	-78	multi-exon	FALSE	canonical	1	1088809	junction_9	363720.8491859426	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	218	1696	40.0	-1	True	ATTAAA	-26
PB.2535.1	chr12	+	1893	2	full-splice_match	BICD1	ENST00000550207.1	1328	2	-88	-477	-38	0	multi-exon	FALSE	canonical	1	31847	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-50	True	AATAAA	-38
PB.2535.2	chr12	+	3849	7	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-460	39345	-66	-398	3prime_fragment	FALSE	canonical	1	67858	junction_5	14716.910100855637	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	564	3185	40.0	-78	True	ATTAAA	-6
PB.2535.3	chr12	+	2661	6	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-431	43335	-37	1477	3prime_fragment	FALSE	canonical	1	67858	junction_5	15838.327126309774	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2127	535	2661	65.0	-49	True	NA	NA
PB.8372.4	chr3	-	2121	12	novel_not_in_catalog	TPRA1	novel	4235	13	NA	NA	5	-2	any annotated donor/acceptor	FALSE	canonical	1	5788	junction_11	184993.72387491268	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	550	1671	25.0	7466	False	AATAAA	-16
PB.11372.2	chr8	+	3099	13	novel_in_catalog	RHPN1	novel	3683	15	NA	NA	-60	38	intron_retention	TRUE	canonical	1	116289	junction_7	79585.7431603732	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	162	923	15.0	2	True	ATTAAA	-25
PB.11372.3	chr8	+	2341	15	full-splice_match	RHPN1	ENST00000289013.10	3683	15	-57	1399	-57	42	multi-exon	TRUE	canonical	1	78437	junction_5	90409.20812506333	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	159	2171	10.0	5	True	ATTAAA	-29
PB.9229.1	chr5	+	3960	27	full-splice_match	MTREX	ENST00000230640.9	4192	27	231	1	-10	-1	multi-exon	FALSE	canonical	1	293780	junction_10	106909.144197837	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	24	3152	30.0	-10	True	AATAAA	-15
PB.11372.4	chr8	+	3732	15	full-splice_match	RHPN1	ENST00000289013.10	3683	15	-50	1	-50	1	multi-exon	FALSE	canonical	1	78437	junction_5	90409.20812506333	NA	11	NA	TRUE	NA	NA	NA	C	coding	670	2013	152	2164	30.0	-39	False	AATAAA	-15
PB.9431.5	chr5	+	3582	6	novel_in_catalog	CDC42SE2	novel	539	4	NA	NA	1	4	intron_retention	FALSE	canonical	1	3484	junction_1	290804.9678589415	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	9	True	AATAAA	-18
PB.275.14	chr1	-	2704	4	incomplete-splice_match	AC114490.2	ENST00000487874.1	3099	17	11	35718	11	-35718	3prime_fragment	FALSE	canonical	1	56120	junction_3	58535.01343640403	NA	1	NA	TRUE	NA	NA	NA	B	coding	170	513	175	687	20.0	-41	True	ATTAAA	-18
PB.7042.4	chr2	-	4400	10	novel_in_catalog	WDFY1	novel	361	2	NA	NA	-7	3	no_combination_of_known_junctions	FALSE	canonical	1	3143	junction_1	124349.98481565778	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	81	1073	20.0	-6	False	AATAAA	-22
PB.4862.2	chr17	+	1840	10	full-splice_match	ERAL1	ENST00000254928.9	1925	10	78	7	6	1	multi-exon	FALSE	canonical	1	505928	junction_3	81308.53802843209	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	293	1333	20.0	0	True	AATAAA	-21
PB.4862.1	chr17	+	2986	9	incomplete-splice_match	ERAL1	ENST00000254928.9	1925	10	78	8	6	0	intron_retention	TRUE	canonical	1	505928	junction_3	86186.02159491628	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	293	1285	15.0	0	True	AATAAA	-20
PB.275.11	chr1	-	4458	16	novel_in_catalog	AC114490.2	novel	3099	17	NA	NA	11	-6641	no_combination_of_known_junctions	FALSE	canonical	1	6813	junction_1	57847.39671607242	NA	2	1	TRUE	NA	NA	NA	B	coding	732	2199	175	2373	30.0	-41	True	NA	NA
PB.3669.3	chr14	+	2649	8	incomplete-splice_match	DYNC1H1	ENST00000643684.1	7596	31	0	24978	0	10956	3prime_fragment	FALSE	canonical	1	288181	junction_1	104696.92358519463	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2529	120	2648	40.0	0	True	NA	NA
PB.3669.2	chr14	+	1435	7	incomplete-splice_match	DYNC1H1	ENST00000643684.1	7596	31	-2	28271	-2	7663	3prime_fragment	FALSE	canonical	1	288181	junction_1	112377.96916717656	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1314	122	1435	75.0	-2	True	NA	NA
PB.3669.1	chr14	+	14310	78	full-splice_match	DYNC1H1	ENST00000360184.9	20003	78	41	5652	-22	-1	multi-exon	TRUE	canonical	1	288181	junction_1	442035.8799071987	NA	5	1	TRUE	NA	NA	NA	C	coding	4646	13941	142	14082	5.0	18	True	AATAAA	-13
PB.8858.3	chr4	-	3060	1	novel_in_catalog	COQ2	novel	1304	7	NA	NA	5	-8188	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	4	True	NA	NA
PB.8858.4	chr4	-	2821	1	novel_in_catalog	COQ2	novel	1304	7	NA	NA	0	-8432	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	AATGAA	-18
PB.8128.2	chr3	+	3086	25	novel_not_in_catalog	RBM6	novel	2342	21	NA	NA	22511	18910	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_18	319623.3652754333	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	181	1785	20.0	-4070	False	AAGAAA	-8
PB.9552.1	chr5	+	2548	6	full-splice_match	PCYOX1L	ENST00000274569.8	2546	6	0	-2	0	2	multi-exon	FALSE	canonical	1	41564	junction_1	47134.4182923689	NA	0	NA	TRUE	NA	NA	NA	A	coding	494	1485	63	1547	5.0	-39	True	AGTAAA	-18
PB.10385.13	chr7	-	4323	17	full-splice_match	RNF216	ENST00000425013.6	5639	17	15	1301	15	1259	multi-exon	FALSE	canonical	1	194313	junction_14	60472.702511617535	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	211	2811	45.0	4	False	NA	NA
PB.747.18	chr1	-	2445	10	novel_in_catalog	RFX5	novel	3576	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	79509	junction_8	139359.97842580022	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	883	2220	15.0	-3	True	AATAAA	-15
PB.10385.10	chr7	-	2555	5	novel_not_in_catalog	RNF216	novel	5639	17	NA	NA	17898	-1144	any annotated donor/acceptor	FALSE	canonical	1	12904	junction_4	151691.17194649135	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	284	886	95.0	-1	True	NA	NA
PB.10385.17	chr7	-	2985	17	full-splice_match	RNF216	ENST00000425013.6	5639	17	45	2609	-5	39	multi-exon	FALSE	canonical	1	194313	junction_14	60472.702511617535	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	181	2781	25.0	-6	True	AATAAA	-18
PB.10385.16	chr7	-	3177	17	full-splice_match	RNF216	ENST00000389902.7	3293	17	68	48	25	40	multi-exon	FALSE	canonical	1	112033	junction_14	71163.91497800057	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	201	2972	20.0	14	False	AATAAA	-19
PB.10385.15	chr7	-	3290	17	novel_not_in_catalog	RNF216	novel	5639	17	NA	NA	20	-42	any annotated donor/acceptor	FALSE	canonical	1	38611	junction_13	84354.58672658233	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	1613	3079	30.0	9	False	AATAAA	-25
PB.10385.14	chr7	-	3463	17	novel_not_in_catalog	RNF216	novel	5639	17	NA	NA	20	-40	any annotated donor/acceptor	FALSE	canonical	1	38611	junction_13	91733.7594989571	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	206	1273	25.0	9	False	AATAAA	-27
PB.7042.5	chr2	-	6723	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	0	3	intron_retention	FALSE	canonical	1	288306	junction_10	43682.67957028277	NA	2	NA	TRUE	NA	NA	NA	C	coding	186	561	2836	3396	20.0	-1	True	AATAAA	-22
PB.10385.19	chr7	-	1641	8	incomplete-splice_match	RNF216	ENST00000389902.7	3293	17	69	102779	-24	4144	3prime_fragment	FALSE	canonical	1	112033	junction_5	72467.94305605418	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1440	200	1639	70.0	15	False	ATTAAA	-33
PB.10385.18	chr7	-	2817	15	incomplete-splice_match	RNF216	ENST00000425013.6	5639	17	39	20687	-11	614	3prime_fragment	FALSE	canonical	1	194313	junction_12	59169.35100171613	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	187	2442	55.0	-12	True	NA	NA
PB.9824.2	chr6	+	4691	6	full-splice_match	ZKSCAN3	ENST00000252211.6	4725	6	30	4	-6	3	multi-exon	FALSE	canonical	1	18396	junction_2	12979.941901256725	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	187	1803	25.0	-6	True	AATAAA	-18
PB.277.15	chr1	-	2921	10	full-splice_match	SFPQ	ENST00000357214.5	3747	10	3	823	3	-823	multi-exon	FALSE	canonical	1	1297136	junction_9	1381324.230798471	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	97	2220	20.0	-1	True	ATTAAA	-17
PB.277.16	chr1	-	2488	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	4	-1183	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	1660967.9818515347	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	96	2147	25.0	0	True	AATAAA	-23
PB.9824.1	chr6	+	2164	6	novel_not_in_catalog	ZKSCAN3	novel	4725	6	NA	NA	-10	-1	any annotated donor/acceptor	FALSE	canonical	1	6655	junction_1	17585.895273201193	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	88	1704	30.0	-10	True	AATAAA	-14
PB.277.10	chr1	-	2857	12	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	3	-670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	1811830.5894510197	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	69	2003	30.0	-1	True	ATTAAA	-14
PB.277.11	chr1	-	2767	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	3	-670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	1660967.9818515347	NA	3	1	TRUE	NA	NA	NA	C	coding	496	1491	423	1913	30.0	-1	True	ATTAAA	-14
PB.277.13	chr1	-	3000	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	3	-672	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	1660967.9818515347	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	97	2148	20.0	-1	True	ATTAAA	-12
PB.4466.7	chr16	+	2815	6	novel_in_catalog	SETD6	novel	2042	9	NA	NA	1	-14	intron_retention	FALSE	canonical	1	28846	junction_2	92643.05214445388	NA	3	NA	TRUE	NA	NA	NA	C	coding	226	681	2068	2748	55.0	1	True	NA	NA
PB.4466.6	chr16	+	1988	9	full-splice_match	SETD6	ENST00000310682.6	2042	9	37	17	3	-17	multi-exon	FALSE	canonical	1	28846	junction_2	75437.82565453736	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	23	1372	85.0	-14	True	TTTAAA	-22
PB.4466.5	chr16	+	1524	8	full-splice_match	SETD6	ENST00000219315.8	1553	8	25	4	0	-4	multi-exon	FALSE	canonical	1	51730	junction_1	71295.97310350361	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	26	1447	25.0	-17	True	AAAAAG	-4
PB.4466.4	chr16	+	1461	9	full-splice_match	SETD6	ENST00000310682.6	2042	9	16	565	-1	-13	multi-exon	FALSE	canonical	1	28846	junction_2	75437.82565453736	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	44	1393	55.0	-3	True	NA	NA
PB.4466.3	chr16	+	2895	9	full-splice_match	SETD6	ENST00000310682.6	2042	9	15	-868	-2	-651	multi-exon	FALSE	canonical	1	28846	junction_2	75437.82565453736	NA	3	NA	TRUE	NA	NA	NA	C	coding	449	1350	45	1394	20.0	-36	False	ATTAAA	-22
PB.4466.2	chr16	+	2585	8	novel_in_catalog	SETD6	novel	2042	9	NA	NA	-3	-13	intron_retention	FALSE	canonical	1	28846	junction_2	80204.3593537592	NA	2	NA	TRUE	NA	NA	NA	C	coding	270	813	46	858	55.0	-37	False	NA	NA
PB.4466.1	chr16	+	2097	8	full-splice_match	SETD6	ENST00000219315.8	1553	8	-9	-535	0	-17	multi-exon	FALSE	canonical	1	51730	junction_1	71295.97310350361	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	60	1481	85.0	0	True	TTTAAA	-22
PB.8866.3	chr4	+	2110	3	novel_not_in_catalog	AFF1	novel	1668	3	NA	NA	-80	16253	any annotated donor/acceptor	FALSE	canonical	1	16446	junction_2	18179.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	136	411	1508	1918	95.0	0	True	NA	NA
PB.8866.2	chr4	+	2190	1	novel_in_catalog	AFF1	novel	1668	3	NA	NA	-150	-35619	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	-132	False	NA	NA
PB.8866.1	chr4	+	2677	3	novel_not_in_catalog	AFF1	novel	1668	3	NA	NA	-26	16707	any annotated donor/acceptor	FALSE	canonical	1	16446	junction_2	35884.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	136	411	1621	2031	40.0	-1416	False	AATAAA	-16
PB.7381.41	chr20	+	2767	6	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	1	1231	intron_retention	FALSE	non_canonical	0	0	junction_1	338056.6065423955	NA	2	1	TRUE	NA	NA	NA	C	coding	116	351	2	352	35.0	1	True	ATTAAA	-27
PB.1865.16	chr11	-	2374	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	-2	2316	-2	-1994	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	24	617	50.0	-9	True	ATTAAA	-20
PB.5012.4	chr17	+	1922	4	novel_in_catalog	NBR2	novel	1344	5	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	3381	junction_3	35217.083950832726	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	17	True	NA	NA
PB.5012.1	chr17	+	1923	3	incomplete-splice_match	NBR2	ENST00000356906.7	978	4	-50	-2	-20	2	intron_retention	FALSE	canonical	1	59568	junction_2	14296.5	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	0	True	NA	NA
PB.12155.22	chrX	-	1675	10	full-splice_match	MAGT1	ENST00000618282.4	2788	10	-11	1124	-2	-1124	multi-exon	FALSE	canonical	1	431665	junction_5	107994.9962127304	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	33	1040	0.0	-12	True	AATACA	-18
PB.5012.3	chr17	+	2276	3	incomplete-splice_match	NBR2	ENST00000467245.5	1158	8	-49	19036	-15	-5698	intron_retention	FALSE	canonical	1	9331	junction_2	39415.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	5	True	ACTAAA	-41
PB.5012.2	chr17	+	3872	3	novel_in_catalog	NBR2	novel	1344	5	NA	NA	-18	-3748	no_combination_of_known_junctions	FALSE	canonical	1	2297	junction_2	42932.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	2	True	NA	NA
PB.7381.42	chr20	+	3378	9	novel_in_catalog	STX16	novel	4318	9	NA	NA	2	-861	combination_of_known_junctions	FALSE	canonical	1	3575	junction_1	292550.6556860869	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	212	1030	90.0	2	True	NA	NA
PB.11460.4	chr9	-	4238	10	full-splice_match	ZDHHC21	ENST00000380916.8	9160	10	147	4775	-59	-4775	multi-exon	FALSE	canonical	1	59266	junction_7	33911.138061369806	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	321	1118	45.0	12	True	TATAAA	-21
PB.851.7	chr1	+	3009	18	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	6426	junction_1	356592.16396194935	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	483	2330	20.0	-4	True	ATTAAA	-17
PB.7042.7	chr2	-	4479	11	novel_in_catalog	WDFY1	novel	361	2	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	9378	junction_2	116525.86522523659	NA	2	1	TRUE	NA	NA	NA	C	coding	319	960	54	1013	20.0	-3	True	AATAAA	-19
PB.3675.1	chr14	+	6280	20	full-splice_match	TECPR2	ENST00000359520.11	8686	20	105	2301	7	1768	multi-exon	TRUE	canonical	1	42066	junction_1	26592.981184980166	NA	1	NA	TRUE	NA	NA	NA	A	coding	1411	4236	122	4357	10.0	7	True	AATAAA	-20
PB.851.1	chr1	+	2661	16	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	14	-4	no_combination_of_known_junctions	FALSE	canonical	1	18610	junction_15	270175.0027263728	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	68	1984	25.0	-8364	False	ATTAAA	-15
PB.101.2	chr1	+	2183	8	novel_in_catalog	MIIP	novel	779	6	NA	NA	4	0	intron_retention	FALSE	canonical	1	200977	junction_1	108761.55010022651	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	166	999	15.0	-31	True	AATAAA	-20
PB.1865.18	chr11	-	2139	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	5	2544	1	-2222	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	17	610	35.0	-2	True	AATAAA	-28
PB.851.2	chr1	+	2835	17	full-splice_match	NCSTN	ENST00000294785.9	2936	17	98	3	-16	-3	multi-exon	FALSE	canonical	1	646165	junction_4	211838.9321659615	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	28	2157	20.0	5	True	ATTAAA	-16
PB.6831.4	chr2	-	2265	10	full-splice_match	METTL8	ENST00000375258.8	8203	10	96	5842	0	0	multi-exon	FALSE	canonical	1	28219	junction_9	43380.12212984191	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	121	1344	100.0	-1	True	NA	NA
PB.399.9	chr1	+	2470	4	novel_not_in_catalog	RNF11	novel	3084	3	NA	NA	29	-353	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	375255.11704261496	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	458	922	45.0	0	True	CATAAA	-14
PB.11059.5	chr8	-	1911	11	novel_in_catalog	ZNF395	novel	4808	10	NA	NA	6	-8	combination_of_known_junctions	FALSE	canonical	1	1294	junction_10	142418.80777074353	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	188	1729	85.0	19	True	NA	NA
PB.11460.5	chr9	-	4486	11	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-88	-4719	any annotated donor/acceptor	FALSE	canonical	1	37	junction_8	54222.97793823205	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	513	1310	40.0	-17	True	AGTAAA	-21
PB.6831.7	chr2	-	2132	9	novel_in_catalog	METTL8	novel	8132	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6881	junction_8	43903.38006278674	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	123	1211	100.0	-32	False	NA	NA
PB.11059.2	chr8	-	3507	9	novel_in_catalog	ZNF395	novel	4808	10	NA	NA	-3	-10	intron_retention	FALSE	canonical	1	19285	junction_8	118432.61613301201	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	197	1513	95.0	-4	True	NA	NA
PB.11059.3	chr8	-	2113	10	full-splice_match	ZNF395	ENST00000344423.9	4808	10	-8	2703	-8	-10	multi-exon	FALSE	canonical	1	2707	junction_9	121975.89127253137	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	141	1682	95.0	-15	True	NA	NA
PB.9471.8	chr5	-	2990	21	novel_in_catalog	BRD8	novel	4388	27	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	78797	junction_11	140637.50075865255	NA	1	NA	TRUE	NA	NA	NA	C	coding	881	2646	34	2679	55.0	11	True	AATAAA	-4
PB.9471.9	chr5	-	2920	20	novel_in_catalog	BRD8	novel	4388	27	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	63260	junction_12	149883.02371665963	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	18	2609	55.0	-2	True	AATAAA	-4
PB.2095.4	chr11	+	1899	16	novel_not_in_catalog	C11orf80	novel	583	4	NA	NA	-7	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	75664.69586520079	NA	0	NA	TRUE	NA	NA	NA	B	coding	577	1734	78	1811	10.0	-46	False	AATAAA	-18
PB.733.3	chr1	-	2091	11	full-splice_match	CERS2	ENST00000368954.9	2505	11	306	108	128	-108	multi-exon	FALSE	canonical	1	1097887	junction_10	338262.74996274716	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	82	1224	75.0	-9	True	NA	NA
PB.733.2	chr1	-	2295	10	novel_in_catalog	CERS2	novel	1618	7	NA	NA	103	-108	intron_retention	FALSE	canonical	1	1097887	junction_9	346014.8490079937	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	835	1428	75.0	4	True	NA	NA
PB.733.1	chr1	-	2223	11	full-splice_match	CERS2	ENST00000368954.9	2505	11	276	6	98	-6	multi-exon	FALSE	canonical	1	1097887	junction_10	338262.74996274716	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	112	1254	25.0	-1	True	AATAAA	-26
PB.4310.34	chr16	-	2048	17	full-splice_match	GGA2	ENST00000309859.8	5973	17	-5	3930	-5	-787	multi-exon	FALSE	canonical	1	350013	junction_16	124237.22461080694	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	89	1930	15.0	-6	True	NA	NA
PB.2095.3	chr11	+	1803	15	novel_not_in_catalog	C11orf80	novel	583	4	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	69845.54308253962	NA	1	NA	TRUE	NA	NA	NA	B	coding	512	1539	177	1715	10.0	-14	True	AATAAA	-18
PB.9471.2	chr5	-	3140	21	novel_in_catalog	BRD8	novel	4388	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	179119	junction_11	133054.00638214545	NA	0	NA	TRUE	NA	NA	NA	C	coding	936	2811	19	2829	55.0	-3	True	AATAAA	-4
PB.9471.3	chr5	-	2963	21	full-splice_match	BRD8	ENST00000402931.5	2982	21	4	15	0	0	multi-exon	FALSE	canonical	1	63260	junction_13	143844.8449227848	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2637	16	2652	55.0	0	True	AATAAA	-4
PB.9471.4	chr5	-	3137	21	novel_in_catalog	BRD8	novel	4388	27	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	63651	junction_7	143168.50932781972	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	18	2075	55.0	-2	True	AATAAA	-4
PB.9471.5	chr5	-	3097	22	novel_in_catalog	BRD8	novel	4388	27	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	14438	junction_12	146315.86857797718	NA	1	NA	TRUE	NA	NA	NA	C	coding	912	2739	48	2786	55.0	-3	True	AATAAA	-4
PB.9471.6	chr5	-	2936	20	full-splice_match	BRD8	ENST00000411594.6	2967	20	31	0	0	0	multi-exon	FALSE	canonical	1	78797	junction_10	146646.84966360644	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	25	2625	55.0	-9	True	AATAAA	-4
PB.9471.7	chr5	-	3023	20	novel_in_catalog	BRD8	novel	4388	27	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	11772	junction_4	156169.17512456124	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	19	2712	55.0	-3	True	AATAAA	-4
PB.10767.7	chr7	+	2189	14	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	4	-295	intron_retention	FALSE	canonical	1	243514	junction_1	99603.15850918544	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1722	468	2189	30.0	-22	True	NA	NA
PB.10767.6	chr7	+	2481	14	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	4	-3	intron_retention	FALSE	canonical	1	243514	junction_1	99603.15850918544	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	468	2297	30.0	-22	True	AATAAA	-13
PB.10767.5	chr7	+	3117	16	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	3	-2	intron_retention	FALSE	canonical	1	243514	junction_1	96670.09557849602	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2202	469	2670	35.0	-23	True	AATAAA	-15
PB.1382.2	chr10	-	2566	4	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	724344	junction_3	555872.8512266892	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	302	1546	10.0	2	True	TATAAA	-19
PB.1382.5	chr10	-	2332	4	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-13	174	any annotated donor/acceptor	FALSE	canonical	1	724344	junction_3	555872.8512266892	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	299	1543	35.0	5	True	AATAAA	-27
PB.10767.2	chr7	+	2260	15	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	243514	junction_1	99428.68234025013	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1773	487	2259	70.0	-3327	False	AAGAAA	-40
PB.10767.1	chr7	+	6814	26	novel_in_catalog	KMT2E	novel	6874	27	NA	NA	-15	0	intron_retention	FALSE	canonical	1	243514	junction_1	90609.32105778964	NA	3	NA	TRUE	NA	NA	NA	C	coding	1858	5577	487	6063	30.0	-3327	False	AATAAA	-20
PB.1614.2	chr10	-	4114	10	novel_in_catalog	LDB1	novel	2285	11	NA	NA	-56	1068	intron_retention	FALSE	canonical	1	247290	junction_9	318980.6212237994	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	681	1631	10.0	-1	True	AATAAA	-15
PB.1382.9	chr10	-	2189	3	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-6	173	any annotated donor/acceptor	FALSE	canonical	1	3072	junction_2	996893.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	157	1401	30.0	12	True	AATAAA	-26
PB.1382.8	chr10	-	2439	4	full-splice_match	HNRNPF	ENST00000356053.7	2670	4	-1	232	-1	173	multi-exon	FALSE	canonical	1	48079	junction_3	872080.4400390291	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	407	1651	30.0	301	False	AATAAA	-26
PB.2280.5	chr11	+	3089	6	novel_in_catalog	NKAPD1	novel	2322	6	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	109927	junction_1	76878.2191900931	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	32	913	25.0	17	True	AATAAA	-17
PB.2280.4	chr11	+	3655	6	full-splice_match	NKAPD1	ENST00000393047.7	3669	6	20	-6	5	6	multi-exon	FALSE	canonical	1	177293	junction_1	51483.222919316155	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	590	1471	20.0	17	True	AATAAA	-25
PB.2280.3	chr11	+	2841	6	novel_not_in_catalog	NKAPD1	novel	2322	6	NA	NA	5	-271	any annotated donor/acceptor	FALSE	canonical	1	255	junction_1	119681.6602916253	NA	4	1	TRUE	NA	NA	NA	C	coding	293	882	53	934	25.0	2	True	AATAAA	-25
PB.2280.2	chr11	+	3420	6	full-splice_match	NKAPD1	ENST00000393047.7	3669	6	-26	275	1	-275	multi-exon	FALSE	canonical	1	177293	junction_1	51483.222919316155	NA	2	NA	TRUE	NA	NA	NA	C	coding	293	882	636	1517	25.0	-7711	False	AATAAA	-21
PB.2280.1	chr11	+	2919	6	full-splice_match	NKAPD1	ENST00000393047.7	3669	6	-29	779	0	237	multi-exon	FALSE	canonical	1	177293	junction_1	51483.222919316155	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	639	1520	45.0	-7714	False	AATAAA	-13
PB.10767.8	chr7	+	2022	14	incomplete-splice_match	KMT2E	ENST00000476671.5	2523	15	-20	1463	8	14	3prime_fragment	FALSE	canonical	1	94944	junction_2	151101.79749681745	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1494	527	2020	75.0	-7	True	NA	NA
PB.1071.2	chr1	+	1232	1	novel_in_catalog	BX571818.1	novel	450	5	NA	NA	49	791	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-279	False	NA	NA
PB.10113.1	chr6	-	4878	16	full-splice_match	MAP3K7	ENST00000369332.7	4830	16	-49	1	-49	-1	multi-exon	FALSE	canonical	1	274957	junction_13	92041.16904284373	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	212	1951	45.0	-28	True	AATAAA	-26
PB.10113.2	chr6	-	4891	16	novel_not_in_catalog	MAP3K7	novel	4633	16	NA	NA	-42	-1	any annotated donor/acceptor	TRUE	canonical	1	25177	junction_12	126086.91373887916	NA	2	NA	TRUE	NA	NA	NA	C	coding	449	1350	615	1964	45.0	-21	True	AATAAA	-26
PB.10113.3	chr6	-	4948	17	full-splice_match	MAP3K7	ENST00000369329.7	4911	17	-46	9	-46	-9	multi-exon	FALSE	canonical	1	91913	junction_6	127144.90599900609	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	209	2029	45.0	-25	True	AATAAA	-18
PB.10113.4	chr6	-	3170	16	full-splice_match	MAP3K7	ENST00000369332.7	4830	16	-61	1721	-61	340	multi-exon	FALSE	canonical	1	274957	junction_13	92041.16904284373	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	224	1963	35.0	-40	False	AATAAA	-24
PB.10113.5	chr6	-	2718	16	full-splice_match	MAP3K7	ENST00000369332.7	4830	16	-10	2122	-10	-12	multi-exon	FALSE	canonical	1	274957	junction_13	92041.16904284373	NA	13	NA	TRUE	NA	NA	NA	C	coding	579	1740	173	1912	35.0	11	True	ATTAAA	-16
PB.10113.6	chr6	-	2816	17	full-splice_match	MAP3K7	ENST00000369329.7	4911	17	-27	2122	-27	-12	multi-exon	FALSE	canonical	1	91913	junction_6	127144.90599900609	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	190	2010	35.0	-6	True	ATTAAA	-16
PB.10113.7	chr6	-	2775	16	novel_not_in_catalog	MAP3K7	novel	4633	16	NA	NA	-58	-23	any annotated donor/acceptor	FALSE	canonical	1	25177	junction_12	126086.91373887916	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	631	1980	45.0	-37	False	ATTAAA	-5
PB.10113.8	chr6	-	2779	16	full-splice_match	MAP3K7	ENST00000369325.7	4633	16	-207	2061	-45	0	multi-exon	FALSE	canonical	1	19534	junction_1	137716.45254497853	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	208	1764	85.0	-24	True	NA	NA
PB.10113.9	chr6	-	2630	18	novel_not_in_catalog	MAP3K7	novel	4633	16	NA	NA	-24	0	any annotated donor/acceptor	FALSE	canonical	1	5356	junction_1	147461.09423922084	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	187	2007	85.0	-3	True	NA	NA
PB.11460.7	chr9	-	4095	10	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-85	-4775	any annotated donor/acceptor	FALSE	canonical	1	12801	junction_7	43802.804550269786	NA	1	1	TRUE	NA	NA	NA	C	coding	150	453	523	975	45.0	-14	True	TATAAA	-21
PB.6647.1	chr2	-	5803	2	full-splice_match	COA5	ENST00000480666.1	958	2	-3722	-1123	3	-86	multi-exon	FALSE	canonical	1	635523	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-22	True	AATAAA	-28
PB.6647.2	chr2	-	1685	3	full-splice_match	COA5	ENST00000328709.7	1754	3	-20	89	3	-89	multi-exon	FALSE	canonical	1	388621	junction_2	123451.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-22	True	AATAAA	-25
PB.6647.3	chr2	-	1723	3	full-splice_match	COA5	ENST00000483527.5	770	3	-4	-949	4	-94	multi-exon	FALSE	canonical	1	20759	junction_2	307382.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-21	True	AATAAA	-20
PB.6647.4	chr2	-	4722	2	full-splice_match	COA5	ENST00000480666.1	958	2	-3722	-42	3	-4	multi-exon	FALSE	canonical	1	635523	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-22	True	AATAAA	-30
PB.6647.5	chr2	-	2367	1	novel_in_catalog	COA5	novel	770	3	NA	NA	2	-3757	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-15	True	NA	NA
PB.10495.1	chr7	-	2798	29	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	1	2047	any annotated donor/acceptor	TRUE	canonical	1	671	junction_1	88156.83734971343	NA	1	NA	TRUE	NA	NA	NA	C	coding	861	2586	17	2602	20.0	0	True	AAAACA	-13
PB.9799.4	chr6	+	3372	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	81144.52029866219	NA	4	1	TRUE	NA	NA	NA	B	coding	293	882	354	1235	20.0	-17	True	NA	NA
PB.12003.12	chrX	+	1568	6	novel_in_catalog	SAT1	novel	801	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	482414	junction_3	1903952.4111176098	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	180	542	20.0	0	True	AATAAA	-16
PB.12003.13	chrX	+	2704	3	full-splice_match	SAT1	ENST00000379253.7	909	3	1	-1796	1	-3	multi-exon	FALSE	canonical	1	5114739	junction_2	139210.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	1518	1988	25.0	1	True	AATAAA	-14
PB.12003.10	chrX	+	2082	6	novel_in_catalog	SAT1	novel	801	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	297163	junction_3	1977831.559470624	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	1109	1729	20.0	0	True	AATAAA	-16
PB.12003.11	chrX	+	1980	6	novel_not_in_catalog	SAT1	novel	801	2	NA	NA	0	-3	intron_retention	FALSE	canonical	1	12042	junction_3	2091570.0167601753	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	1300	1629	25.0	0	True	AATAAA	-14
PB.12003.16	chrX	+	2385	4	novel_in_catalog	SAT1	novel	801	2	NA	NA	10	-3	intron_retention	FALSE	canonical	1	5013071	junction_2	158841.56864064967	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	1414	2034	25.0	-1502	False	AATAAA	-14
PB.9799.7	chr6	+	1703	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	4	-162	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	78032.60332777175	NA	4	1	TRUE	NA	NA	NA	B	coding	305	918	350	1267	60.0	-13	True	AATAAA	-13
PB.12003.14	chrX	+	2291	4	novel_in_catalog	SAT1	novel	801	2	NA	NA	1	-81	intron_retention	FALSE	canonical	1	5013071	junction_2	178238.48896788695	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	1608	2228	15.0	1	True	AATAAA	-19
PB.12003.15	chrX	+	2907	2	full-splice_match	SAT1	ENST00000462639.1	826	2	-2084	3	3	-3	multi-exon	FALSE	canonical	1	5389152	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	1846	2316	25.0	3	True	AATAAA	-14
PB.3390.2	chr14	+	1310	10	full-splice_match	BRMS1L	ENST00000216807.11	2657	10	54	1293	54	-190	multi-exon	FALSE	canonical	1	120342	junction_1	20461.45906603708	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	146	1117	10.0	-85	False	AATAAA	-16
PB.9799.6	chr6	+	3190	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	90480.59584855405	NA	6	2	TRUE	NA	NA	NA	B	coding	293	882	183	1064	20.0	-16	True	NA	NA
PB.6961.2	chr2	+	1574	13	full-splice_match	CYP20A1	ENST00000356079.8	1949	13	59	316	-10	15	multi-exon	FALSE	canonical	1	106815	junction_2	25003.416897607323	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	65	1453	30.0	-342	False	TATAAA	-39
PB.6961.1	chr2	+	2217	14	novel_not_in_catalog	CYP20A1	novel	1949	13	NA	NA	1	181	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	45725.66502329392	NA	4	1	TRUE	NA	NA	NA	C	coding	462	1389	86	1474	10.0	0	True	AGTAAA	-28
PB.5398.9	chr18	-	2145	12	novel_in_catalog	MPPE1	novel	4236	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	15107	junction_9	81582.15589106917	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	628	1752	25.0	-1	True	AATAAA	-22
PB.9799.1	chr6	+	3894	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	74642.10964621445	NA	4	1	TRUE	NA	NA	NA	B	coding	305	918	378	1295	20.0	-105	False	NA	NA
PB.9394.10	chr5	-	4526	17	novel_in_catalog	MCC	novel	8257	17	NA	NA	33	875	combination_of_known_junctions	FALSE	canonical	1	5197	junction_16	22653.371913659867	NA	2	NA	TRUE	NA	NA	NA	C	coding	766	2301	181	2481	70.0	1	True	AAAACA	-9
PB.9305.11	chr5	-	2502	13	novel_not_in_catalog	WDR41	novel	376	3	NA	NA	0	-58	intron_retention	FALSE	canonical	1	2303	junction_2	126686.40479905381	NA	1	1	TRUE	NA	NA	NA	C	coding	401	1206	288	1493	25.0	-1	True	NA	NA
PB.1001.1	chr1	+	2492	1	full-splice_match	PACERR	ENST00000608917.1	825	1	60	-1727	60	1727	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-6	True	AATAAA	-23
PB.3390.1	chr14	+	2764	11	novel_not_in_catalog	BRMS1L	novel	2657	10	NA	NA	29	-2	any annotated donor/acceptor	TRUE	canonical	1	2268	junction_4	61221.76771451474	NA	1	1	TRUE	NA	NA	NA	C	coding	183	552	171	722	15.0	9	True	AATAAA	-18
PB.4564.1	chr16	+	3759	9	full-splice_match	VAT1L	ENST00000302536.2	3825	9	56	10	56	-10	multi-exon	FALSE	canonical	1	83797	junction_3	31062.96561597709	NA	0	NA	TRUE	NA	NA	NA	A	coding	419	1260	98	1357	30.0	0	True	AATAAA	-14
PB.9094.18	chr4	-	5751	20	novel_in_catalog	ACSL1	novel	3636	20	NA	NA	-13	0	intron_retention	FALSE	canonical	1	449852	junction_19	238105.66057929047	NA	3	NA	TRUE	NA	NA	NA	C	coding	365	1098	3130	4227	20.0	-1	True	AATAAA	-15
PB.5069.13	chr17	+	2760	20	incomplete-splice_match	KPNB1	ENST00000540627.5	2989	21	1515	31	1515	16	5prime_fragment	FALSE	canonical	1	1456557	junction_4	422812.91790257645	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	320	2515	65.0	1646	False	NA	NA
PB.5069.12	chr17	+	4100	21	full-splice_match	KPNB1	ENST00000540627.5	2989	21	-413	-698	-413	698	multi-exon	FALSE	canonical	1	10420	junction_1	613478.9976327633	NA	2	NA	TRUE	NA	NA	NA	C	coding	731	2196	931	3126	75.0	-282	False	AATATA	-31
PB.5069.11	chr17	+	3819	21	full-splice_match	KPNB1	ENST00000540627.5	2989	21	-420	-410	418	410	multi-exon	FALSE	canonical	1	10420	junction_1	613478.9976327633	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	938	3133	100.0	-289	False	CATAAA	-42
PB.5069.10	chr17	+	3440	21	full-splice_match	KPNB1	ENST00000540627.5	2989	21	-451	0	387	0	multi-exon	FALSE	canonical	1	10420	junction_1	613478.9976327633	NA	37	6	TRUE	NA	NA	NA	C	coding	731	2196	969	3164	75.0	-320	False	AAAACA	-17
PB.5069.17	chr17	+	2301	17	incomplete-splice_match	KPNB1	ENST00000540627.5	2989	21	9921	-28	4192	28	5prime_fragment	FALSE	canonical	1	1456557	junction_1	411829.3230135618	NA	2	NA	TRUE	NA	NA	NA	C	coding	658	1977	21	1997	35.0	-1972	False	AAAAAG	-19
PB.9094.12	chr4	-	3877	22	novel_not_in_catalog	ACSL1	novel	3636	20	NA	NA	-19	-2	any annotated donor/acceptor	FALSE	canonical	1	8450	junction_21	329551.9161165448	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	254	2350	20.0	-7	True	AATAAA	-18
PB.9094.11	chr4	-	3934	21	novel_in_catalog	ACSL1	novel	3636	20	NA	NA	32	-2	combination_of_known_junctions	FALSE	canonical	1	5151	junction_20	286454.42050183134	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	311	2407	20.0	6554	False	AATAAA	-18
PB.9425.3	chr5	+	4608	9	novel_in_catalog	PRRC1	novel	4699	9	NA	NA	-27	4	intron_retention	FALSE	canonical	1	12735	junction_1	153229.17586229296	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	102	1439	30.0	-6711	False	AATAAA	-20
PB.10062.7	chr6	-	1690	9	novel_not_in_catalog	EEF1A1	novel	4441	7	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	6031179.690872993	NA	4	1	TRUE	NA	NA	NA	C	coding	444	1335	63	1397	10.0	-7	True	ATTAAA	-15
PB.3390.4	chr14	+	2600	10	novel_not_in_catalog	BRMS1L	novel	2657	10	NA	NA	-46	-1	any annotated donor/acceptor	FALSE	canonical	1	5688	junction_8	48615.58506802292	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	123	1115	20.0	-8	True	AATAAA	-19
PB.1490.6	chr10	-	3038	20	incomplete-splice_match	POLR3A	ENST00000372371.7	6640	31	5	17930	5	-1970	3prime_fragment	FALSE	canonical	1	87360	junction_19	33652.69988263321	NA	7	NA	TRUE	NA	NA	NA	C	coding	946	2841	134	2974	20.0	-1	True	AATAAA	-25
PB.10381.17	chr7	+	2182	11	novel_in_catalog	WIPI2	novel	4476	13	NA	NA	-3	1	no_combination_of_known_junctions	FALSE	canonical	1	10714	junction_1	265543.1095126364	NA	4	1	TRUE	NA	NA	NA	C	coding	310	933	473	1405	25.0	10	True	ATTAAA	-21
PB.10381.16	chr7	+	4426	13	full-splice_match	WIPI2	ENST00000288828.8	4476	13	55	-5	-3	5	multi-exon	FALSE	canonical	1	43561	junction_1	285151.1115804312	NA	5	NA	TRUE	NA	NA	NA	C	coding	454	1365	178	1542	40.0	10	True	CATAAA	-11
PB.10381.15	chr7	+	2075	12	full-splice_match	WIPI2	ENST00000401525.7	2112	12	37	0	-13	0	multi-exon	FALSE	canonical	1	259902	junction_1	201434.0622997884	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	188	1498	10.0	0	True	ATTAAA	-16
PB.3390.5	chr14	+	2577	10	full-splice_match	BRMS1L	ENST00000216807.11	2657	10	79	1	-44	-1	multi-exon	FALSE	canonical	1	120342	junction_1	20461.45906603708	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	121	1092	20.0	-6	True	AATAAA	-19
PB.10381.13	chr7	+	4384	12	full-splice_match	WIPI2	ENST00000401525.7	2112	12	37	-2309	-13	7	multi-exon	FALSE	canonical	1	259902	junction_1	201434.0622997884	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	188	1498	40.0	0	True	CATAAA	-13
PB.1490.5	chr10	-	4343	31	full-splice_match	POLR3A	ENST00000372371.7	6640	31	0	2297	0	-2297	multi-exon	FALSE	canonical	1	87360	junction_30	42080.51373366167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	139	4311	10.0	-6	True	AAGAAA	-23
PB.10381.11	chr7	+	2330	13	full-splice_match	WIPI2	ENST00000288828.8	4476	13	43	2103	-15	0	multi-exon	FALSE	canonical	1	43561	junction_1	285151.1115804312	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	190	1554	30.0	-2	True	ATTAAA	-20
PB.10381.10	chr7	+	2047	12	full-splice_match	WIPI2	ENST00000382384.6	1948	12	-45	-54	-18	0	multi-exon	FALSE	canonical	1	259902	junction_1	212710.66816404246	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	193	1470	10.0	-5	True	ATTAAA	-16
PB.7668.32	chr22	-	3433	11	novel_in_catalog	HPS4	novel	471	4	NA	NA	3	-17	combination_of_known_junctions	FALSE	canonical	1	10446	junction_9	107703.19978296838	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	1211	2365	35.0	-10	True	AATAAA	-19
PB.6452.1	chr2	+	1942	5	full-splice_match	CRIPT	ENST00000238892.3	1953	5	35	-24	35	24	multi-exon	FALSE	canonical	1	408308	junction_3	50440.89045791618	NA	1	NA	TRUE	NA	NA	NA	A	coding	101	306	98	403	20.0	-46	True	AATAAA	-42
PB.7668.30	chr22	-	3583	14	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	1551	-17	any annotated donor/acceptor	FALSE	canonical	1	3962	junction_4	91404.79091337149	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	471	2450	35.0	9	True	AATAAA	-19
PB.7668.31	chr22	-	3558	12	novel_in_catalog	HPS4	novel	471	4	NA	NA	2	-17	combination_of_known_junctions	FALSE	canonical	1	15956	junction_1	98231.54849488265	NA	3	1	TRUE	NA	NA	NA	C	coding	649	1950	541	2490	35.0	25	False	AATAAA	-19
PB.7668.36	chr22	-	3690	13	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	3	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	96905.17013250492	NA	1	1	TRUE	NA	NA	NA	C	coding	405	1218	1341	2558	35.0	-10	True	AATAAA	-18
PB.6993.10	chr2	+	2151	1	novel_in_catalog	XRCC5	novel	3761	23	NA	NA	20	-5517	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-9	True	NA	NA
PB.6993.11	chr2	+	2346	14	incomplete-splice_match	XRCC5	ENST00000392132.6	3428	21	84	57395	30	7577	3prime_fragment	FALSE	canonical	1	2064329	junction_8	560034.8375348506	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	57	1730	85.0	1	True	NA	NA
PB.1490.3	chr10	-	5154	31	full-splice_match	POLR3A	ENST00000372371.7	6640	31	14	1472	14	-1472	multi-exon	FALSE	canonical	1	87360	junction_30	42080.51373366167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	125	4297	20.0	8	False	NA	NA
PB.7668.38	chr22	-	3898	15	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	2	-19	any annotated donor/acceptor	FALSE	canonical	1	2373	junction_6	100815.02158380902	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	1436	2767	35.0	-28	True	AATAAA	-17
PB.7668.39	chr22	-	2788	12	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	-8	-21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	100528.31428010718	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	535	1752	30.0	31	False	AATAAA	-15
PB.2301.1	chr11	-	3965	6	full-splice_match	MPZL3	ENST00000278949.8	3968	6	2	1	-1	-1	multi-exon	FALSE	canonical	1	51778	junction_5	15883.342675897917	NA	2	NA	TRUE	NA	NA	NA	A	coding	235	708	55	762	15.0	-29	True	AATAAA	-21
PB.1490.2	chr10	-	5342	31	full-splice_match	POLR3A	ENST00000372371.7	6640	31	25	1273	25	-1273	multi-exon	FALSE	canonical	1	87360	junction_30	42080.51373366167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	114	4286	25.0	-6	True	ATTAAA	-21
PB.9773.1	chr6	-	3227	13	full-splice_match	MBOAT1	ENST00000324607.7	1794	13	-83	-1350	-83	1350	multi-exon	FALSE	canonical	1	56029	junction_12	28017.098010138776	NA	1	NA	TRUE	NA	NA	NA	A	coding	495	1488	249	1736	40.0	-30	True	NA	NA
PB.6428.23	chr2	-	3155	1	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-1	-158	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.7334.10	chr20	-	3666	22	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	1	9236	junction_11	98948.7072097953	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	15	3365	90.0	4173	False	NA	NA
PB.7334.11	chr20	-	3611	21	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	-7	-19	combination_of_known_junctions	FALSE	canonical	1	9236	junction_10	104346.44016221876	NA	0	NA	TRUE	NA	NA	NA	C	coding	1088	3267	44	3310	90.0	-15	True	NA	NA
PB.7334.16	chr20	-	3890	21	novel_in_catalog	ZMYND8	novel	5362	22	NA	NA	0	-20	no_combination_of_known_junctions	FALSE	canonical	1	8150	junction_1	104670.20990371377	NA	0	NA	TRUE	NA	NA	NA	C	coding	1218	3657	37	3693	90.0	-8	True	NA	NA
PB.1490.1	chr10	-	5611	31	full-splice_match	POLR3A	ENST00000372371.7	6640	31	30	999	30	-999	multi-exon	FALSE	canonical	1	87360	junction_30	42080.51373366167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	109	4281	95.0	-1	True	NA	NA
PB.6428.24	chr2	-	2549	1	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	-1	-764	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	1	True	NA	NA
PB.6428.25	chr2	-	2240	2	incomplete-splice_match	SRSF7	ENST00000443213.5	1903	7	-7	3894	-1	-765	intron_retention	FALSE	canonical	1	3239751	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	1	True	NA	NA
PB.3940.7	chr15	-	969	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	27	6	-6	-6	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-25	True	AATAAA	-16
PB.3940.6	chr15	-	1474	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	30	-502	-3	157	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-22	True	NA	NA
PB.3940.5	chr15	-	1660	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	36	-694	3	349	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-16	True	AAGAAA	-27
PB.3940.4	chr15	-	2076	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	30	-1104	-3	759	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-22	True	AAAACA	-36
PB.3940.3	chr15	-	2212	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	30	-1240	-3	895	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-22	True	AATGAA	-11
PB.3940.2	chr15	-	3208	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	51	-2257	0	-920	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	ACTAAA	-21
PB.3940.1	chr15	-	3703	3	full-splice_match	SNAPC5	ENST00000316634.5	1002	3	9	-2710	9	-467	multi-exon	FALSE	canonical	1	296202	junction_2	84430.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	7747	False	NA	NA
PB.11981.1	chrX	-	1256	10	full-splice_match	PIR	ENST00000380420.9	1282	10	20	6	20	-6	multi-exon	FALSE	canonical	1	135860	junction_9	80000.8424983415	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	185	1057	35.0	8	True	AATAAA	-18
PB.5447.3	chr18	+	2751	3	full-splice_match	ZNF271P	ENST00000399070.3	5124	3	24	2349	-18	307	multi-exon	FALSE	canonical	1	243595	junction_1	58299.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	959	2230	95.0	-10	True	NA	NA
PB.5447.2	chr18	+	2222	2	full-splice_match	ZNF271P	ENST00000638208.1	2191	2	-31	0	-19	0	multi-exon	FALSE	canonical	1	49774	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	737	2008	80.0	-11	True	NA	NA
PB.5447.1	chr18	+	2299	3	full-splice_match	ZNF271P	ENST00000399070.3	5124	3	21	2804	21	66	multi-exon	FALSE	canonical	1	243595	junction_1	58299.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	962	2233	20.0	-13	True	ATTAAA	-17
PB.5447.7	chr18	+	2434	3	full-splice_match	ZNF271P	ENST00000399070.3	5124	3	34	2656	-8	0	multi-exon	FALSE	canonical	1	243595	junction_1	58299.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	949	2220	80.0	0	True	NA	NA
PB.5447.6	chr18	+	3247	3	full-splice_match	ZNF271P	ENST00000399070.3	5124	3	34	1843	-8	813	multi-exon	FALSE	canonical	1	243595	junction_1	58299.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	423	1272	949	2220	15.0	0	True	ATTAAA	-15
PB.4957.8	chr17	-	3680	27	novel_in_catalog	MED24	novel	3896	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	17257	junction_26	229708.3566344726	NA	2	NA	TRUE	NA	NA	NA	C	coding	1033	3102	152	3253	5.0	-9	True	AATAAA	-19
PB.4957.9	chr17	-	3231	24	novel_in_catalog	MED24	novel	3896	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	504	junction_23	207286.85306215656	NA	1	NA	TRUE	NA	NA	NA	C	coding	918	2757	48	2804	5.0	0	True	AATAAA	-19
PB.4957.6	chr17	-	3642	25	novel_not_in_catalog	MED24	novel	3896	25	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	95172	junction_2	206093.55212762384	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	108	3014	5.0	-1	True	AATAAA	-21
PB.4957.4	chr17	-	3494	26	full-splice_match	MED24	ENST00000394128.6	3479	26	-11	-4	0	0	multi-exon	TRUE	canonical	1	147780	junction_25	184105.58465052166	NA	2	1	TRUE	NA	NA	NA	C	coding	989	2970	94	3063	10.0	-9	True	AATAAA	-23
PB.5447.8	chr18	+	2353	2	full-splice_match	ZNF271P	ENST00000638208.1	2191	2	-18	-144	-6	144	multi-exon	FALSE	canonical	1	49774	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	724	1995	75.0	2	True	AAGAAA	-43
PB.4957.2	chr17	-	3485	26	novel_in_catalog	MED24	novel	3896	25	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	175254	junction_25	181666.23524248417	NA	24	3	TRUE	NA	NA	NA	C	coding	989	2970	95	3064	5.0	12	True	AATAAA	-13
PB.4957.3	chr17	-	3581	27	novel_in_catalog	MED24	novel	3896	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	57652	junction_20	217744.83971257988	NA	3	NA	TRUE	NA	NA	NA	C	coding	1008	3027	124	3150	10.0	-17	False	AATAAA	-23
PB.4957.1	chr17	-	3895	27	novel_in_catalog	MED24	novel	3896	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	12486	junction_20	221727.780966804	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	786	3464	10.0	-16	False	AATAAA	-23
PB.9183.6	chr5	+	2313	10	incomplete-splice_match	NIPBL	ENST00000448238.2	8729	46	-11	79176	-11	9117	3prime_fragment	FALSE	canonical	1	155837	junction_1	62924.38642990686	NA	1	NA	TRUE	NA	NA	NA	B	coding	611	1833	480	2312	60.0	10	True	AAAAAG	-26
PB.9183.4	chr5	+	2539	10	incomplete-splice_match	NIPBL	ENST00000448238.2	8729	46	-29	78968	2	9325	3prime_fragment	FALSE	canonical	1	155837	junction_1	62924.38642990686	NA	1	NA	TRUE	NA	NA	NA	B	coding	680	2040	498	2537	65.0	-8	True	AATAGA	-12
PB.9183.5	chr5	+	2365	11	novel_in_catalog	NIPBL	novel	10435	47	NA	NA	10	64	no_combination_of_known_junctions	FALSE	canonical	1	10020	junction_9	92161.66486864265	NA	0	NA	TRUE	NA	NA	NA	B	coding	625	1875	490	2364	30.0	0	True	NA	NA
PB.9183.2	chr5	+	2441	10	incomplete-splice_match	NIPBL	ENST00000448238.2	8729	46	-34	79071	-3	9222	3prime_fragment	FALSE	canonical	1	155837	junction_1	62924.38642990686	NA	0	NA	TRUE	NA	NA	NA	B	coding	646	1938	503	2440	60.0	-13	True	ACTAAA	-11
PB.9183.3	chr5	+	3687	12	incomplete-splice_match	NIPBL	ENST00000448238.2	8729	46	283	63620	283	64	3prime_fragment	FALSE	canonical	1	155837	junction_1	60124.13947192649	NA	7	NA	TRUE	NA	NA	NA	B	coding	1167	3501	186	3686	30.0	-74	False	NA	NA
PB.9183.1	chr5	+	3421	10	incomplete-splice_match	NIPBL	ENST00000448238.2	8729	46	-35	78092	-4	10201	3prime_fragment	FALSE	canonical	1	155837	junction_1	62924.38642990686	NA	0	NA	TRUE	NA	NA	NA	B	coding	972	2916	504	3419	65.0	-14	True	GATAAA	-24
PB.1015.2	chr1	+	2170	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	202	3570	-19	54	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	42	1637	35.0	0	True	AAAAAG	-21
PB.1015.3	chr1	+	2767	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	111	3064	-34	560	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	133	1728	35.0	35	True	TATAAA	-24
PB.1015.1	chr1	+	1562	14	incomplete-splice_match	CDC73	ENST00000649895.1	2364	16	-146	4657	37	-4657	3prime_fragment	FALSE	canonical	1	351635	junction_1	98403.51005104881	NA	2	1	TRUE	NA	NA	NA	C	coding	399	1197	365	1561	60.0	1	True	AAGAAA	-17
PB.4834.2	chr17	-	961	2	full-splice_match	TMEM11	ENST00000317635.5	2095	2	458	676	-3	-2	multi-exon	FALSE	canonical	1	328769	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	15	593	10.0	-6	True	ATTAAA	-15
PB.1015.7	chr1	+	5772	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	158	12	-7	-12	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	86	1681	45.0	-16	True	AATAAA	-16
PB.1015.4	chr1	+	4283	17	full-splice_match	CDC73	ENST00000367435.4	5942	17	222	1437	0	52	multi-exon	FALSE	canonical	1	43173	junction_14	146613.3441815234	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	22	1617	10.0	-284	False	ATTAAA	-19
PB.4834.1	chr17	-	1268	3	full-splice_match	TMEM11	ENST00000577419.5	1246	3	-15	-7	0	3	multi-exon	FALSE	canonical	1	145699	junction_1	1895.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	377	895	5.0	-16	True	ATTAAA	-20
PB.747.17	chr1	-	2249	11	full-splice_match	RFX5	ENST00000452671.6	2355	11	106	0	0	0	multi-exon	FALSE	canonical	1	254587	junction_10	74785.89628298908	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	173	2023	10.0	-4	True	AATAAA	-16
PB.9038.9	chr4	+	3877	2	incomplete-splice_match	GUCY1B1	ENST00000503520.5	1951	14	-64	43003	0	-43003	3prime_fragment	FALSE	canonical	1	149673	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	189	570	7	576	65.0	-13	True	NA	NA
PB.9038.8	chr4	+	2444	14	full-splice_match	GUCY1B1	ENST00000264424.12	3124	14	-38	718	0	40	multi-exon	FALSE	canonical	1	98629	junction_2	42022.3253945106	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	121	1980	40.0	-18	True	NA	NA
PB.9038.5	chr4	+	3395	4	incomplete-splice_match	GUCY1B1	ENST00000503520.5	1951	14	-69	25928	0	-25928	3prime_fragment	FALSE	canonical	1	98629	junction_2	20921.862446307743	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	121	444	45.0	-18	True	AATAAA	-14
PB.9038.4	chr4	+	5452	13	novel_in_catalog	GUCY1B1	novel	2316	13	NA	NA	-3	20	intron_retention	FALSE	canonical	1	98629	junction_2	42002.18477849297	NA	3	NA	TRUE	NA	NA	NA	C	coding	392	1179	124	1302	60.0	-21	True	AATAAA	-37
PB.9038.7	chr4	+	2964	13	novel_in_catalog	GUCY1B1	novel	2316	13	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1437	junction_4	61605.91930902194	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	121	1782	20.0	-18	True	AATAAA	-17
PB.9038.6	chr4	+	3122	14	novel_not_in_catalog	GUCY1B1	novel	2316	13	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	59236.846010853835	NA	11	2	TRUE	NA	NA	NA	C	coding	547	1644	296	1939	20.0	-18	True	AATAAA	-18
PB.9038.1	chr4	+	3102	14	full-splice_match	GUCY1B1	ENST00000264424.12	3124	14	24	-2	-7	2	multi-exon	FALSE	canonical	1	98629	junction_2	42022.3253945106	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	59	1918	25.0	44	True	AATAAA	-19
PB.9038.3	chr4	+	3180	14	novel_not_in_catalog	GUCY1B1	novel	2316	13	NA	NA	-7	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	61467.41088697269	NA	7	1	TRUE	NA	NA	NA	C	coding	547	1644	350	1993	35.0	-387	False	AATAAA	-22
PB.9038.2	chr4	+	3058	14	full-splice_match	GUCY1B1	ENST00000503520.5	1951	14	-59	-1048	0	5	multi-exon	FALSE	canonical	1	5852	junction_9	59781.01705242631	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	111	1871	35.0	-8	True	AATAAA	-22
PB.10460.2	chr7	-	2582	4	novel_in_catalog	JAZF1	novel	2919	4	NA	NA	-51	1935	combination_of_known_junctions	FALSE	canonical	1	2602	junction_1	66714.0689926462	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	218	922	15.0	-5	True	AATAAA	-18
PB.4553.8	chr16	+	3227	5	novel_not_in_catalog	ZFP1	novel	1457	4	NA	NA	-3	81	any annotated donor/acceptor	TRUE	canonical	1	1535	junction_3	37252.16520552866	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	356	1480	50.0	0	True	NA	NA
PB.4553.9	chr16	+	3303	4	full-splice_match	ZFP1	ENST00000393430.6	3250	4	-57	4	-2	-4	multi-exon	FALSE	canonical	1	3282	junction_1	38385.75241182882	NA	2	NA	TRUE	NA	NA	NA	C	coding	407	1224	182	1405	20.0	1	True	AATAAA	-13
PB.4553.6	chr16	+	3146	4	full-splice_match	ZFP1	ENST00000570010.5	1457	4	20	-1709	2	81	multi-exon	FALSE	canonical	1	32232	junction_1	25448.232844126702	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	176	1399	50.0	-12	True	NA	NA
PB.4553.7	chr16	+	3625	6	novel_not_in_catalog	ZFP1	novel	1457	4	NA	NA	-6	81	any annotated donor/acceptor	TRUE	canonical	1	459	junction_4	35175.46271820742	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	754	1878	50.0	-3	True	NA	NA
PB.4553.4	chr16	+	3696	5	novel_in_catalog	ZFP1	novel	1457	4	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	1	749	junction_1	35657.92479502277	NA	2	NA	TRUE	NA	NA	NA	C	coding	352	1059	739	1797	20.0	-24	True	AATAAA	-14
PB.4553.5	chr16	+	3307	4	full-splice_match	ZFP1	ENST00000570010.5	1457	4	11	-1861	-7	-3	multi-exon	FALSE	canonical	1	32232	junction_1	25448.232844126702	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	185	1408	20.0	-21	True	AATAAA	-14
PB.4553.2	chr16	+	3552	5	novel_in_catalog	ZFP1	novel	1457	4	NA	NA	0	81	combination_of_known_junctions	FALSE	canonical	1	749	junction_1	35657.92479502277	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	747	1805	50.0	-32	True	NA	NA
PB.4553.3	chr16	+	3533	5	novel_in_catalog	ZFP1	novel	1457	4	NA	NA	0	81	combination_of_known_junctions	FALSE	canonical	1	7605	junction_1	33383.07199296524	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	728	1786	50.0	-32	True	NA	NA
PB.4553.1	chr16	+	3691	5	novel_in_catalog	ZFP1	novel	1457	4	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	1	7605	junction_1	33383.07199296524	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	735	1793	20.0	-39	True	AATAAA	-13
PB.4201.8	chr16	+	3039	4	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-15	-9	combination_of_known_junctions	FALSE	canonical	1	36845	junction_1	37504.48364603298	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	350	2146	40.0	-21	True	AATAAA	-11
PB.4201.9	chr16	+	3270	6	novel_not_in_catalog	ZNF263	novel	1721	2	NA	NA	-7	-9	any annotated donor/acceptor	FALSE	canonical	1	904	junction_4	42196.86299240739	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	342	1190	40.0	-13	True	AATAAA	-11
PB.9496.3	chr5	+	2131	11	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	62638	junction_2	164524.9045374286	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	154	1995	10.0	-18	True	AATAAA	-21
PB.9496.2	chr5	+	4174	23	incomplete-splice_match	ANKHD1	ENST00000421134.5	4814	27	-36	16102	0	371	3prime_fragment	FALSE	canonical	1	111724	junction_11	126492.02655239019	NA	0	NA	TRUE	NA	NA	NA	C	coding	1340	4020	155	4174	55.0	-19	True	NA	NA
PB.9496.5	chr5	+	4457	25	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	9	-7	combination_of_known_junctions	FALSE	canonical	1	31106	junction_13	140551.73364369528	NA	1	NA	TRUE	NA	NA	NA	C	coding	1437	4311	146	4456	80.0	-10	True	NA	NA
PB.9496.4	chr5	+	4069	22	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	7	372	combination_of_known_junctions	FALSE	canonical	1	62638	junction_2	146955.11932147553	NA	0	NA	TRUE	NA	NA	NA	C	coding	1307	3921	148	4068	55.0	-12	True	NA	NA
PB.9496.7	chr5	+	3694	24	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	12	-14	combination_of_known_junctions	FALSE	canonical	1	62638	junction_2	154696.19807043744	NA	1	NA	TRUE	NA	NA	NA	C	coding	1184	3552	143	3694	80.0	-7	True	NA	NA
PB.9496.6	chr5	+	3795	25	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	10	-14	combination_of_known_junctions	FALSE	canonical	1	76261	junction_15	136731.91103546284	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3651	145	3795	80.0	-9	True	NA	NA
PB.9496.9	chr5	+	4768	26	incomplete-splice_match	ANKHD1	ENST00000297183.10	7606	33	15	13286	15	-10	3prime_fragment	FALSE	canonical	1	124883	junction_10	118222.83580815341	NA	1	NA	TRUE	NA	NA	NA	C	coding	1543	4629	140	4768	75.0	-4	True	AAAAAG	-35
PB.4201.1	chr16	+	4094	4	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-106	-9	intron_retention	FALSE	canonical	1	85580	junction_1	16400.323275946594	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	441	1082	40.0	-3	True	AATAAA	-11
PB.4201.2	chr16	+	2904	3	full-splice_match	ZNF263	ENST00000575823.1	851	3	-477	-1576	-7	-9	multi-exon	FALSE	canonical	1	51502	junction_1	37016.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	342	824	40.0	-13	True	AATAAA	-11
PB.4201.3	chr16	+	2772	2	full-splice_match	ZNF263	ENST00000574253.1	1139	2	-10	-1623	-6	-2	multi-exon	FALSE	canonical	1	48916	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	320	1000	25.0	9	True	AATAAA	-18
PB.4201.4	chr16	+	3031	4	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-50	-9	no_combination_of_known_junctions	FALSE	canonical	1	7739	junction_1	39772.90185540904	NA	4	1	TRUE	NA	NA	NA	C	coding	435	1308	831	2138	40.0	-3996	False	AATAAA	-11
PB.4201.5	chr16	+	3259	6	full-splice_match	ZNF263	ENST00000219069.5	3830	6	562	9	-1	-9	multi-exon	FALSE	canonical	1	52898	junction_2	23638.080260461084	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	315	2366	40.0	14	True	AATAAA	-11
PB.4201.6	chr16	+	3183	5	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-22	-10	no_combination_of_known_junctions	FALSE	canonical	1	9206	junction_4	33025.78430181485	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	357	2291	40.0	-28	True	AATAAA	-10
PB.4201.7	chr16	+	3416	1	novel_in_catalog	ZNF263	novel	1721	2	NA	NA	-19	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	156	471	354	824	45.0	-25	True	NA	NA
PB.1296.3	chr10	+	1756	11	novel_in_catalog	SEC61A2	novel	707	7	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	1	28125	junction_6	46556.00100363002	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	106	594	15.0	-6	True	AATAAA	-18
PB.7042.8	chr2	-	4203	9	novel_not_in_catalog	WDFY1	novel	361	2	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	130421.5655985907	NA	2	1	TRUE	NA	NA	NA	C	coding	161	486	56	541	20.0	-5	True	AATAAA	-19
PB.5457.8	chr18	+	3255	25	full-splice_match	PIK3C3	ENST00000262039.8	9443	25	25	6163	-3	188	multi-exon	FALSE	canonical	1	181952	junction_5	36178.90426600686	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	62	2725	20.0	-15	True	TTTAAA	-30
PB.5457.9	chr18	+	4105	25	full-splice_match	PIK3C3	ENST00000262039.8	9443	25	31	5307	3	1044	multi-exon	FALSE	canonical	1	181952	junction_5	36178.90426600686	NA	2	1	TRUE	NA	NA	NA	C	coding	887	2664	56	2719	10.0	-9	True	TATAAA	-17
PB.7902.3	chr3	+	5643	8	full-splice_match	TRNT1	ENST00000251607.10	2276	8	25	-3392	-10	1536	multi-exon	FALSE	canonical	1	147808	junction_1	32336.396590990098	NA	4	NA	TRUE	NA	NA	NA	C	coding	405	1218	165	1382	85.0	-10	True	NA	NA
PB.5429.22	chr18	-	2949	10	novel_in_catalog	SS18	novel	3414	11	NA	NA	0	-66	intron_retention	FALSE	canonical	1	173602	junction_3	164282.2680680427	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	45	1085	30.0	-1	True	TATAAA	-19
PB.5429.23	chr18	-	2245	11	full-splice_match	SS18	ENST00000415083.6	3414	11	12	1157	0	-67	multi-exon	FALSE	canonical	1	173602	junction_4	181190.7365959971	NA	2	1	TRUE	NA	NA	NA	C	coding	418	1257	45	1301	30.0	-1	True	TATAAA	-18
PB.5457.6	chr18	+	2933	25	full-splice_match	PIK3C3	ENST00000262039.8	9443	25	21	6489	-7	-55	multi-exon	FALSE	canonical	1	181952	junction_5	36178.90426600686	NA	2	1	TRUE	NA	NA	NA	C	coding	887	2664	66	2729	35.0	-19	True	AATATA	-21
PB.5457.7	chr18	+	2799	24	full-splice_match	PIK3C3	ENST00000398870.7	9206	24	-27	6434	-7	0	multi-exon	FALSE	canonical	1	10203	junction_1	61973.83694939845	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	66	2540	35.0	-19	True	AATAAA	-13
PB.5429.26	chr18	-	2145	7	incomplete-splice_match	SS18	ENST00000269137.11	1836	10	298	19310	-5	2086	3prime_fragment	FALSE	canonical	1	369480	junction_6	115680.06451620012	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	35	928	25.0	9	True	AATAAA	-45
PB.5457.1	chr18	+	2860	24	novel_in_catalog	PIK3C3	novel	9443	25	NA	NA	-14	6	combination_of_known_junctions	TRUE	canonical	1	16521	junction_21	60401.18314017913	NA	1	NA	TRUE	NA	NA	NA	C	coding	758	2277	101	2377	25.0	-54	True	AATAAA	-19
PB.5429.24	chr18	-	2476	12	novel_in_catalog	SS18	novel	3414	11	NA	NA	7	8	combination_of_known_junctions	FALSE	canonical	1	5047	junction_9	258214.15954142783	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	357	1457	30.0	570	False	ATTAAA	-21
PB.5429.25	chr18	-	1902	10	full-splice_match	SS18	ENST00000269137.11	1836	10	288	-354	0	225	multi-exon	FALSE	canonical	1	369480	junction_9	113209.13000523947	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	45	1208	25.0	-1	True	NA	NA
PB.10830.23	chr7	+	2965	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	364	2	intron_retention	FALSE	canonical	1	7377	junction_1	104334.59558547383	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	202	1746	10.0	-976	False	NA	NA
PB.505.1	chr1	+	2182	1	novel_in_catalog	WDR63	novel	2905	22	NA	NA	7946	-75294	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	93	282	56	337	95.0	9851	False	NA	NA
PB.8745.9	chr4	-	2538	13	novel_in_catalog	UGDH	novel	3216	12	NA	NA	-1	-534	combination_of_known_junctions	FALSE	canonical	1	4227	junction_12	303487.9556891655	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	194	1717	40.0	-4	True	AATAAA	-24
PB.8745.8	chr4	-	2536	12	full-splice_match	UGDH	ENST00000316423.10	3216	12	15	665	-5	491	multi-exon	FALSE	canonical	1	597196	junction_6	113944.3812403575	NA	4	NA	TRUE	NA	NA	NA	C	coding	494	1485	329	1813	40.0	-40	False	ATTAAA	-17
PB.8745.5	chr4	-	2871	12	full-splice_match	UGDH	ENST00000316423.10	3216	12	179	166	0	-133	multi-exon	FALSE	canonical	1	597196	junction_6	113944.3812403575	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	165	1649	20.0	-3	True	ATTAAA	-21
PB.8745.4	chr4	-	2727	11	full-splice_match	UGDH	ENST00000507089.5	1712	11	127	-1142	125	-6	multi-exon	FALSE	canonical	1	7148	junction_10	256041.79193451995	NA	6	1	TRUE	NA	NA	NA	C	coding	397	1194	160	1353	35.0	251	False	AATAAA	-7
PB.8745.7	chr4	-	2899	12	full-splice_match	UGDH	ENST00000316423.10	3216	12	52	265	-2	-232	multi-exon	FALSE	canonical	1	597196	junction_6	113944.3812403575	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	292	1776	5.0	-3	True	NA	NA
PB.8745.1	chr4	-	3162	12	full-splice_match	UGDH	ENST00000316423.10	3216	12	52	2	-2	-2	multi-exon	FALSE	canonical	1	597196	junction_6	113944.3812403575	NA	3	NA	TRUE	NA	NA	NA	C	coding	494	1485	292	1776	20.0	-3	True	AATAAA	-19
PB.8745.3	chr4	-	3081	12	novel_not_in_catalog	UGDH	novel	3216	12	NA	NA	35	-2	any annotated donor/acceptor	FALSE	canonical	1	1370	junction_11	245720.69944034945	NA	3	NA	TRUE	NA	NA	NA	C	coding	469	1410	286	1695	20.0	34	False	AATAAA	-19
PB.8745.2	chr4	-	3251	13	novel_not_in_catalog	UGDH	novel	3216	12	NA	NA	2	-1	any annotated donor/acceptor	TRUE	canonical	1	2958	junction_6	302327.5852330617	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	288	1238	20.0	1	True	AATAAA	-20
PB.1081.9	chr1	-	2058	9	novel_in_catalog	FCMR	novel	1950	8	NA	NA	-4	111	combination_of_known_junctions	FALSE	canonical	1	7927	junction_8	126584.30469552692	NA	2	1	TRUE	NA	NA	NA	C	coding	390	1173	142	1314	25.0	9235	False	NA	NA
PB.4598.14	chr16	-	3865	7	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	872846.9166186397	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	86	919	10.0	-3	True	AAGAAA	-15
PB.4598.11	chr16	-	4161	7	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	809388.1301956847	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	86	838	10.0	-3	True	AAGAAA	-15
PB.4598.10	chr16	-	4150	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	797250.6059438289	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	479	1204	10.0	-1	True	AAGAAA	-15
PB.4598.13	chr16	-	3891	5	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	941327.4354104951	NA	1	1	TRUE	NA	NA	NA	C	coding	125	378	568	945	10.0	-1	True	AAGAAA	-15
PB.4598.12	chr16	-	4019	10	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	10086	-2	any annotated donor/acceptor	FALSE	canonical	1	4389	junction_9	796024.1360368477	NA	4	1	TRUE	NA	NA	NA	C	coding	241	726	349	1074	10.0	7154	False	AAGAAA	-14
PB.1081.2	chr1	-	2322	9	novel_not_in_catalog	FCMR	novel	1950	8	NA	NA	-9	1083	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	128645.38052184142	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	154	1326	55.0	-7	True	AATAAA	-32
PB.1081.5	chr1	-	2492	9	novel_in_catalog	FCMR	novel	1950	8	NA	NA	-31	518	combination_of_known_junctions	FALSE	canonical	1	7927	junction_8	126584.30469552692	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	169	1341	15.0	9208	False	AATAGA	-17
PB.4598.18	chr16	-	3648	11	novel_not_in_catalog	SLC7A5	novel	3983	10	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	772052.1775295049	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	83	1606	10.0	0	True	AAGAAA	-15
PB.10830.22	chr7	+	2254	9	novel_in_catalog	IRF5	novel	2988	9	NA	NA	67	-9	intron_retention	FALSE	canonical	1	7502	junction_1	104306.47601898934	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	149	1693	40.0	-1439	False	AATGAA	-5
PB.10241.1	chr6	+	1244	6	full-splice_match	CCDC28A	ENST00000617445.4	1240	6	0	-4	0	-1	multi-exon	FALSE	canonical	1	37273	junction_5	133663.99144810843	NA	1	NA	TRUE	NA	NA	NA	A	coding	184	555	177	731	10.0	0	True	AATAAA	-16
PB.399.7	chr1	+	2154	3	full-splice_match	RNF11	ENST00000242719.3	3084	3	577	353	509	-353	multi-exon	FALSE	canonical	1	795200	junction_2	835.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	52	159	216	374	45.0	193	False	CATAAA	-14
PB.8613.10	chr3	+	2921	15	novel_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	0	92	intron_retention	FALSE	canonical	1	1167	junction_7	42389.35898246018	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	1436	1888	20.0	-3	True	NA	NA
PB.11124.2	chr8	+	3339	18	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	8	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	339274.35497233825	NA	1	1	TRUE	NA	NA	NA	C	coding	863	2592	123	2714	30.0	3	True	AATAAA	-18
PB.6987.1	chr2	+	1430	1	antisense	novelGene_BARD1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	105	318	681	998	90.0	NA	False	AATAAA	-34
PB.10917.1	chr7	+	2988	5	novel_in_catalog	ZNF862	novel	6950	8	NA	NA	20	-576	combination_of_known_junctions	FALSE	canonical	1	11996	junction_1	27996.40182572575	NA	3	1	TRUE	NA	NA	NA	B	coding	301	906	296	1201	40.0	-17	True	ATTAAA	-21
PB.10917.2	chr7	+	3138	5	incomplete-splice_match	ZNF862	ENST00000223210.4	6950	8	59	15306	51	-569	3prime_fragment	FALSE	canonical	1	11714	junction_1	28106.493016516662	NA	0	NA	TRUE	NA	NA	NA	B	coding	385	1158	187	1344	25.0	14	True	ATTAAA	-28
PB.7336.14	chr20	+	7825	22	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	-13	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	165313.8456450751	NA	5	NA	TRUE	NA	NA	NA	C	coding	1407	4224	151	4374	45.0	2	True	AATAAA	-12
PB.7336.15	chr20	+	6635	22	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	9	13	no_combination_of_known_junctions	FALSE	canonical	1	12936	junction_3	134248.37806164142	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	629	4297	75.0	24	True	AATAGA	-27
PB.7336.16	chr20	+	5983	24	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	9	-488	any annotated donor/acceptor	FALSE	canonical	1	10379	junction_12	125675.2754286089	NA	5	NA	TRUE	NA	NA	NA	C	coding	1312	3939	208	4146	15.0	24	True	NA	NA
PB.7336.17	chr20	+	5832	23	full-splice_match	NCOA3	ENST00000372004.7	7939	23	9	2098	9	-963	multi-exon	FALSE	canonical	1	84210	junction_19	107384.1744725393	NA	2	NA	TRUE	NA	NA	NA	C	coding	1420	4263	208	4470	60.0	24	True	AATAAA	-23
PB.5732.1	chr19	+	3543	4	full-splice_match	ZNF441	ENST00000357901.4	4356	4	3	810	3	782	multi-exon	FALSE	canonical	1	32173	junction_1	4546.590004241274	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	100	2181	80.0	-21	False	NA	NA
PB.1986.2	chr11	+	1421	7	full-splice_match	ASRGL1	ENST00000415229.6	2270	7	5	844	0	0	multi-exon	FALSE	canonical	1	35492	junction_1	75250.27588967512	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	211	1137	95.0	-4	True	NA	NA
PB.1986.1	chr11	+	2184	7	full-splice_match	ASRGL1	ENST00000301776.9	2182	7	-2	0	0	0	multi-exon	FALSE	canonical	1	138451	junction_1	48425.24944695691	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	136	1062	35.0	-6	True	AATAAA	-11
PB.7336.13	chr20	+	7883	22	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	-13	-2	no_combination_of_known_junctions	FALSE	canonical	1	8401	junction_1	125222.58464065564	NA	12	1	TRUE	NA	NA	NA	C	coding	1424	4275	151	4425	25.0	2	True	AATAAA	-19
PB.6485.9	chr2	+	3052	5	novel_not_in_catalog	PEX13	novel	1533	2	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	126512.43351421037	NA	2	1	TRUE	NA	NA	NA	C	coding	403	1212	31	1242	40.0	10	True	AATAAA	-16
PB.6761.1	chr2	+	3142	11	full-splice_match	SPOPL	ENST00000280098.8	6025	11	40	2843	40	1574	multi-exon	FALSE	canonical	1	76007	junction_4	30810.40019928336	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	340	1518	60.0	-209	False	ATTAAA	-40
PB.7336.18	chr20	+	5400	23	novel_not_in_catalog	NCOA3	novel	7939	23	NA	NA	9	719	any annotated donor/acceptor	FALSE	canonical	1	122263	junction_19	102846.95524849709	NA	3	NA	TRUE	NA	NA	NA	C	coding	1423	4272	208	4479	30.0	24	True	AATAAA	-29
PB.7336.19	chr20	+	4734	23	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	10	96	combination_of_known_junctions	FALSE	canonical	1	35752	junction_14	125780.84060177713	NA	3	1	TRUE	NA	NA	NA	C	coding	1409	4230	207	4436	25.0	-807	False	NA	NA
PB.7098.1	chr2	-	4879	10	full-splice_match	NDUFA10	ENST00000252711.6	4915	10	38	-2	-19	2	multi-exon	FALSE	canonical	1	505596	junction_9	324515.5486264425	NA	7	NA	TRUE	NA	NA	NA	C	coding	355	1068	64	1131	35.0	21	False	AATAAA	-19
PB.9440.8	chr5	+	2894	17	novel_in_catalog	AC116366.3	novel	7893	27	NA	NA	107296	-36746	no_combination_of_known_junctions	FALSE	canonical	1	1992	junction_3	128915.58563793244	NA	0	NA	TRUE	NA	NA	NA	B	coding	839	2517	378	2894	75.0	-31	True	AATAAA	-28
PB.7098.3	chr2	-	4543	9	full-splice_match	NDUFA10	ENST00000485344.6	4509	9	-34	0	-12	0	multi-exon	FALSE	canonical	1	505596	junction_8	334825.0829070121	NA	2	NA	TRUE	NA	NA	NA	C	coding	236	711	57	767	20.0	-26	True	AATAAA	-15
PB.4945.4	chr17	+	1068	6	full-splice_match	RPL19	ENST00000579260.5	1051	6	-1	-16	-1	0	multi-exon	FALSE	canonical	1	108687	junction_1	6241955.356141074	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	405	989	5.0	0	True	AATAAA	-17
PB.4945.3	chr17	+	1697	5	novel_in_catalog	RPL19	novel	737	6	NA	NA	-1	0	intron_retention	FALSE	canonical	1	5681312	junction_1	4630438.810200633	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	1253	1618	5.0	0	True	AATAAA	-17
PB.4945.2	chr17	+	1562	5	novel_in_catalog	RPL19	novel	737	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	3248649	junction_1	5355535.076404382	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	834	1484	0.0	0	True	AATAAA	-16
PB.4945.1	chr17	+	728	6	full-splice_match	RPL19	ENST00000225430.9	737	6	4	5	4	0	multi-exon	FALSE	canonical	1	3248649	junction_2	5107741.315932929	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	59	649	5.0	4	True	AATAAA	-17
PB.7098.6	chr2	-	2199	5	incomplete-splice_match	NDUFA10	ENST00000485344.6	4509	9	-31	52521	-9	1537	3prime_fragment	FALSE	canonical	1	505596	junction_4	432033.97278129356	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	54	764	15.0	-23	True	NA	NA
PB.1428.2	chr10	+	2741	4	full-splice_match	NRBF2	ENST00000277746.10	1853	4	27	-915	27	910	multi-exon	FALSE	canonical	1	54378	junction_2	17860.739632563436	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	164	1018	15.0	-22	True	AATAAA	-18
PB.1428.3	chr10	+	1802	4	full-splice_match	NRBF2	ENST00000277746.10	1853	4	49	2	49	-2	multi-exon	FALSE	canonical	1	54378	junction_2	17860.739632563436	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	142	996	15.0	0	True	AATAAA	-15
PB.1428.1	chr10	+	3265	4	full-splice_match	NRBF2	ENST00000277746.10	1853	4	1	-1413	1	1408	multi-exon	FALSE	canonical	1	54378	junction_2	17860.739632563436	NA	3	NA	TRUE	NA	NA	NA	C	coding	284	855	190	1044	35.0	-48	True	CATAAA	-25
PB.8613.12	chr3	+	3884	15	novel_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	-1	1040	intron_retention	FALSE	canonical	1	1167	junction_8	41632.479058434896	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	1573	2073	55.0	4	True	NA	NA
PB.653.7	chr1	-	5001	3	novel_not_in_catalog	ZNF697	novel	5041	3	NA	NA	-490	-150	any annotated donor/acceptor	FALSE	canonical	1	26754	junction_2	32543.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	545	1638	231	1868	35.0	2	True	NA	NA
PB.7004.3	chr2	-	2590	11	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	-6	0	intron_retention	FALSE	canonical	1	523090	junction_9	425554.69787759363	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	903	1316	30.0	-7	True	AATAAA	-18
PB.1238.6	chr1	+	4185	6	novel_not_in_catalog	DESI2	novel	4208	5	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	5930	junction_4	23435.86755893624	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	189	557	30.0	0	True	ATTAAA	-14
PB.310.1	chr1	-	2398	1	antisense	novelGene_MACF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11275.52	chr8	-	1693	6	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	-23	134	no_combination_of_known_junctions	FALSE	canonical	1	6068	junction_5	819014.6512366186	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	189	695	25.0	1	True	NA	NA
PB.11275.53	chr8	-	1850	6	full-splice_match	YWHAZ	ENST00000353245.7	2829	6	-36	1015	11	128	multi-exon	FALSE	canonical	1	9976	junction_2	750454.7415845942	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	121	858	20.0	1	True	NA	NA
PB.11275.50	chr8	-	1790	6	full-splice_match	YWHAZ	ENST00000395953.6	994	6	97	-893	-48	135	multi-exon	FALSE	canonical	1	9976	junction_2	809995.1709373582	NA	3	1	TRUE	NA	NA	NA	C	coding	245	738	54	791	25.0	14	True	NA	NA
PB.11275.54	chr8	-	2368	5	full-splice_match	YWHAZ	ENST00000480304.5	2247	5	-87	-34	-37	34	multi-exon	FALSE	canonical	1	9976	junction_1	792474.3545437291	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	140	829	90.0	-13	True	NA	NA
PB.11835.1	chr9	-	2091	1	full-splice_match	DOLK	ENST00000372586.3	2090	1	-2	1	-2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	538	1617	319	1935	20.0	-19	True	AATAAA	-16
PB.1706.9	chr10	+	4326	24	novel_in_catalog	EDRF1	novel	4243	26	NA	NA	8	0	intron_retention	FALSE	canonical	1	445	junction_19	48225.41466346493	NA	0	NA	TRUE	NA	NA	NA	C	coding	1185	3558	98	3655	15.0	1	True	AATAAA	-23
PB.1706.8	chr10	+	2834	16	incomplete-splice_match	EDRF1	ENST00000525091.5	4211	20	8	7428	7	3	3prime_fragment	FALSE	canonical	1	42321	junction_6	38159.24752309575	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	99	2690	20.0	0	True	TATAAA	-16
PB.10907.1	chr7	-	2773	10	full-splice_match	PDIA4	ENST00000286091.8	2903	10	140	-10	-33	10	multi-exon	FALSE	canonical	1	1112324	junction_9	539480.0569474278	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	94	2031	35.0	-34	True	AATAAA	-30
PB.3681.9	chr14	+	2822	13	novel_in_catalog	EIF5	novel	521	3	NA	NA	-1	-59	combination_of_known_junctions	FALSE	canonical	1	11147	junction_12	741661.9882796406	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	443	1738	15.0	-1	True	ATTAAA	-16
PB.3681.8	chr14	+	1887	12	full-splice_match	EIF5	ENST00000216554.7	5945	12	214	3844	-21	-175	multi-exon	FALSE	canonical	1	259288	junction_6	646631.7152561091	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	463	1758	15.0	-21	True	ACTAAA	-6
PB.10907.5	chr7	-	4491	9	novel_in_catalog	PDIA4	novel	2903	10	NA	NA	-37	-381	intron_retention	FALSE	canonical	1	1112324	junction_8	537318.0772035633	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	98	1291	10.0	-38	True	NA	NA
PB.958.1	chr1	-	2419	6	full-splice_match	ANGPTL1	ENST00000234816.6	3348	6	8	921	8	-2	multi-exon	FALSE	canonical	1	15597	junction_5	14623.961802466527	NA	0	NA	TRUE	NA	NA	NA	A	coding	491	1476	441	1916	20.0	-3	True	AATAAA	-16
PB.1706.1	chr10	+	4494	25	full-splice_match	EDRF1	ENST00000356792.8	4128	25	126	-492	0	0	multi-exon	TRUE	canonical	1	75347	junction_7	37879.535829586544	NA	0	NA	TRUE	NA	NA	NA	C	coding	1238	3717	107	3823	15.0	-8	True	AATAAA	-23
PB.3681.4	chr14	+	3693	11	novel_in_catalog	EIF5	novel	521	3	NA	NA	1	-58	intron_retention	FALSE	canonical	1	19685	junction_1	739178.956427799	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	280	1575	20.0	-47	True	ATTAAA	-17
PB.1706.3	chr10	+	4387	24	full-splice_match	EDRF1	ENST00000337623.7	4387	24	4	-4	4	0	multi-exon	FALSE	canonical	1	42321	junction_6	38983.41305404332	NA	0	NA	TRUE	NA	NA	NA	C	coding	1204	3615	102	3716	15.0	-3	True	AATAAA	-23
PB.1706.2	chr10	+	4509	25	novel_not_in_catalog	EDRF1	novel	4243	26	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_21	47704.42456738741	NA	2	NA	TRUE	NA	NA	NA	C	coding	1048	3147	106	3252	15.0	-7	True	AATAAA	-23
PB.1706.5	chr10	+	6343	24	novel_in_catalog	EDRF1	novel	4243	26	NA	NA	6	0	intron_retention	FALSE	canonical	1	75347	junction_7	37277.172421711846	NA	1	NA	TRUE	NA	NA	NA	C	coding	897	2694	100	2793	15.0	-1	True	AATAAA	-23
PB.1706.4	chr10	+	2939	17	incomplete-splice_match	EDRF1	ENST00000419769.6	4243	26	192	21911	4	3	3prime_fragment	FALSE	canonical	1	75347	junction_7	36070.315026694734	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	102	2795	20.0	-3	True	TATAAA	-16
PB.1706.7	chr10	+	4603	25	full-splice_match	EDRF1	ENST00000356792.8	4128	25	134	-609	7	117	multi-exon	FALSE	canonical	1	75347	junction_7	37879.535829586544	NA	2	NA	TRUE	NA	NA	NA	C	coding	1238	3717	99	3815	35.0	0	True	ATTAAA	-22
PB.1706.6	chr10	+	3630	24	incomplete-splice_match	EDRF1	ENST00000356792.8	4128	25	133	9820	6	4018	3prime_fragment	FALSE	canonical	1	75347	junction_7	34900.63982086119	NA	0	NA	TRUE	NA	NA	NA	C	coding	1177	3531	100	3630	70.0	-1	True	ATTAAA	-16
PB.158.1	chr1	-	4828	3	full-splice_match	ZNF436	ENST00000374608.3	3788	3	140	-1180	140	653	multi-exon	FALSE	canonical	1	65051	junction_2	20255.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	242	1654	80.0	-1	True	NA	NA
PB.158.2	chr1	-	4165	3	full-splice_match	ZNF436	ENST00000374608.3	3788	3	149	-526	149	-1	multi-exon	FALSE	canonical	1	65051	junction_2	20255.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	233	1645	40.0	8	True	ATTAAA	-19
PB.158.4	chr1	-	3638	3	full-splice_match	ZNF436	ENST00000374608.3	3788	3	151	-1	151	1	multi-exon	FALSE	canonical	1	65051	junction_2	20255.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	231	1643	15.0	10	True	AATAAA	-20
PB.1964.9	chr11	+	2695	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	11	no_combination_of_known_junctions	FALSE	canonical	1	4467	junction_2	443764.28668634983	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	201	1094	20.0	4	True	AATAAA	-37
PB.1964.8	chr11	+	2771	7	full-splice_match	MS4A1	ENST00000534668.5	3475	7	0	704	0	-2	multi-exon	FALSE	canonical	1	28600	junction_1	422645.04799049627	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	290	1183	40.0	0	True	AATAAA	-24
PB.1964.7	chr11	+	5963	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	7	-1	intron_retention	FALSE	canonical	1	263820	junction_2	442265.15617280995	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	3306	3680	25.0	-3	True	AATAAA	-19
PB.1964.6	chr11	+	5046	5	novel_in_catalog	MS4A1	novel	495	3	NA	NA	-21	11	intron_retention	FALSE	canonical	1	599322	junction_1	295762.8310948656	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	3071	3445	20.0	-59	False	AATAAA	-37
PB.1964.5	chr11	+	2326	6	novel_in_catalog	MS4A1	novel	495	3	NA	NA	3	10	no_combination_of_known_junctions	FALSE	canonical	1	4476	junction_4	472369.8860983414	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	109	726	20.0	7	True	AATAAA	-36
PB.1964.4	chr11	+	4349	7	novel_in_catalog	MS4A1	novel	495	3	NA	NA	0	-89	intron_retention	FALSE	canonical	1	263820	junction_2	414898.5730157097	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	2237	2848	65.0	0	True	NA	NA
PB.1964.3	chr11	+	2863	8	novel_in_catalog	MS4A1	novel	495	3	NA	NA	-2	11	intron_retention	FALSE	canonical	1	263820	junction_2	384483.0389056486	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	369	1262	20.0	10	True	AATAAA	-37
PB.1964.2	chr11	+	3288	7	full-splice_match	MS4A1	ENST00000345732.8	3331	7	42	1	0	-1	multi-exon	FALSE	canonical	1	599322	junction_1	255644.77038591396	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	112	1005	25.0	4	True	AATAAA	-19
PB.11110.13	chr8	+	3142	20	novel_not_in_catalog	IKBKB	novel	3938	22	NA	NA	0	-1	intron_retention	FALSE	canonical	1	6691	junction_17	114620.82051771888	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	253	1674	5.0	0	True	NA	NA
PB.4959.1	chr17	-	2670	8	full-splice_match	NR1D1	ENST00000246672.3	2772	8	95	7	95	-7	multi-exon	FALSE	canonical	1	169685	junction_4	58610.88070295063	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	537	2381	5.0	-1	True	NA	NA
PB.4959.2	chr17	-	2510	8	full-splice_match	NR1D1	ENST00000246672.3	2772	8	96	166	96	-166	multi-exon	FALSE	canonical	1	169685	junction_4	58610.88070295063	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	536	2380	10.0	0	True	TATAAA	-14
PB.4959.3	chr17	-	2307	8	novel_not_in_catalog	NR1D1	novel	2772	8	NA	NA	12	-166	any annotated donor/acceptor	FALSE	canonical	1	1615	junction_3	101678.99022162736	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	620	1717	10.0	7508	False	TATAAA	-14
PB.5449.1	chr18	+	2048	12	novel_in_catalog	GALNT1	novel	272	3	NA	NA	-66	2	no_combination_of_known_junctions	FALSE	canonical	1	108	junction_1	264369.46459756524	NA	1	NA	TRUE	NA	NA	NA	B	coding	559	1680	357	2036	80.0	-705	False	NA	NA
PB.5449.3	chr18	+	3966	12	novel_in_catalog	GALNT1	novel	272	3	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	40045	junction_1	254026.33940340558	NA	9	NA	TRUE	NA	NA	NA	B	coding	559	1680	227	1906	25.0	0	True	ATTAAA	-38
PB.5449.2	chr18	+	3080	12	novel_not_in_catalog	GALNT1	novel	272	3	NA	NA	-237	701	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	264397.56243865815	NA	6	NA	TRUE	NA	NA	NA	B	coding	559	1680	178	1857	30.0	7	True	AATAAA	-18
PB.9579.34	chr5	+	8219	7	incomplete-splice_match	G3BP1	ENST00000394123.7	10240	12	23568	1435	22974	-1435	5prime_fragment	FALSE	canonical	1	555803	junction_2	292798.75390431	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	106	960	40.0	-8923	False	NA	NA
PB.3004.2	chr12	+	2379	17	novel_in_catalog	TCTN2	novel	556	4	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	9423	junction_9	35675.40612412273	NA	3	NA	TRUE	NA	NA	NA	C	coding	651	1956	129	2084	0.0	-16	True	NA	NA
PB.3004.1	chr12	+	2912	18	full-splice_match	TCTN2	ENST00000303372.6	2912	18	0	0	0	0	multi-exon	FALSE	canonical	1	65546	junction_1	24800.529339980883	NA	2	NA	TRUE	NA	NA	NA	C	coding	697	2094	129	2222	20.0	-16	True	AATAAA	-30
PB.399.6	chr1	+	2598	3	full-splice_match	RNF11	ENST00000242719.3	3084	3	21	465	21	-465	multi-exon	FALSE	canonical	1	795200	junction_2	835.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	466	930	65.0	-8	True	NA	NA
PB.686.5	chr1	-	3249	1	novel_in_catalog	TXNIP	novel	2926	8	NA	NA	20	189	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-2	True	NA	NA
PB.11494.1	chr9	+	1876	3	novel_not_in_catalog	SMIM27	novel	1003	3	NA	NA	-29	-1	any annotated donor/acceptor	FALSE	canonical	1	98	junction_2	1434.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	123	372	855	1226	25.0	-65	False	NA	NA
PB.1296.4	chr10	+	2326	11	novel_in_catalog	SEC61A2	novel	707	7	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	28125	junction_6	46556.00100363002	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	101	589	35.0	-1	True	AATAAA	-13
PB.11777.9	chr9	+	4637	27	novel_in_catalog	RABGAP1	novel	3897	28	NA	NA	1	-449	no_combination_of_known_junctions	FALSE	canonical	1	2282	junction_1	114131.11061476519	NA	2	NA	TRUE	NA	NA	NA	C	coding	1069	3210	224	3433	75.0	1	True	NA	NA
PB.6489.5	chr2	-	4740	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-40	5	intron_retention	TRUE	canonical	1	27096	junction_8	375197.75272960006	NA	2	NA	TRUE	NA	NA	NA	C	coding	1022	3069	781	3849	20.0	25	True	AATAAA	-21
PB.10369.5	chr7	+	2699	20	novel_not_in_catalog	EIF3B	novel	1074	8	NA	NA	112	0	any annotated donor/acceptor	FALSE	canonical	1	7086	junction_1	693594.3283459885	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	595	2223	25.0	125	False	AATAAA	-15
PB.10369.4	chr7	+	2615	20	novel_not_in_catalog	EIF3B	novel	1074	8	NA	NA	-7	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	759512.6593199141	NA	1	1	TRUE	NA	NA	NA	C	coding	542	1629	516	2144	25.0	-10	True	AATAAA	-15
PB.10369.6	chr7	+	2552	19	full-splice_match	EIF3B	ENST00000360876.8	3055	19	500	3	484	0	multi-exon	FALSE	canonical	1	1110934	junction_15	514675.6116712145	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	373	2001	25.0	497	False	AATAAA	-15
PB.10369.1	chr7	+	2890	20	novel_not_in_catalog	EIF3B	novel	1074	8	NA	NA	-39	0	intron_retention	FALSE	non_canonical	0	0	junction_1	694596.3368245935	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	96	2414	25.0	-42	True	AATAAA	-15
PB.6489.6	chr2	-	4605	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	364577.93375179253	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	515	3718	15.0	-11	True	AATAAA	-17
PB.10369.3	chr7	+	2677	20	novel_not_in_catalog	EIF3B	novel	1074	8	NA	NA	-11	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	670047.8075913275	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	68	2128	25.0	-14	True	AATAAA	-13
PB.10369.2	chr7	+	2605	20	novel_not_in_catalog	EIF3B	novel	1074	8	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	694596.3368245935	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	69	2129	25.0	-15	True	AATAAA	-15
PB.6489.7	chr2	-	4869	24	novel_in_catalog	XPO1	novel	4915	25	NA	NA	-85	0	intron_retention	FALSE	canonical	1	18674	junction_19	373615.4542799442	NA	3	NA	TRUE	NA	NA	NA	C	coding	1052	3159	826	3984	20.0	-20	True	AATAAA	-15
PB.10369.8	chr7	+	2230	17	incomplete-splice_match	EIF3B	ENST00000397011.2	2966	19	7762	5	-377	0	5prime_fragment	FALSE	canonical	1	841451	junction_16	553874.9488863065	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	126	1754	25.0	-5217	False	AATAAA	-15
PB.6938.5	chr2	-	1720	12	full-splice_match	CLK1	ENST00000432425.5	1682	12	-40	2	3	-1	multi-exon	FALSE	canonical	1	277027	junction_9	372872.45922989375	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	721	1497	35.0	-6	True	AATAAA	-16
PB.10616.10	chr7	+	2334	11	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8740	5790	intron_retention	FALSE	canonical	1	1162	junction_1	105299.8974939672	NA	0	NA	TRUE	NA	NA	NA	B	coding	176	531	1618	2148	30.0	-3	True	AATAAA	-17
PB.6938.4	chr2	-	1777	13	full-splice_match	CLK1	ENST00000321356.8	1888	13	37	74	0	-1	multi-exon	FALSE	canonical	1	349702	junction_10	393416.36883244396	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	100	1554	35.0	-5	True	AATAAA	-16
PB.162.1	chr1	-	989	3	full-splice_match	ID3	ENST00000374561.5	1251	3	260	2	-91	-2	multi-exon	FALSE	canonical	1	1702018	junction_2	171774.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	119	360	109	468	25.0	304	False	AATAAA	-28
PB.3735.1	chr15	+	2550	11	full-splice_match	GABRA5	ENST00000335625.9	3251	11	700	1	-9	-1	multi-exon	FALSE	canonical	1	8412	junction_1	17252.20116419931	NA	0	NA	TRUE	NA	NA	NA	A	coding	462	1389	189	1577	25.0	-28	True	AATAAA	-19
PB.4723.1	chr17	-	3632	13	novel_in_catalog	DVL2	novel	3018	15	NA	NA	0	-1	intron_retention	FALSE	canonical	1	226779	junction_9	89948.71319288317	NA	2	NA	TRUE	NA	NA	NA	C	coding	369	1110	256	1365	5.0	-1	True	AATAAA	-18
PB.4723.3	chr17	-	3258	14	novel_in_catalog	DVL2	novel	3018	15	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	226779	junction_10	88155.64468208267	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	76	1749	5.0	8659	False	AATAAA	-17
PB.4723.2	chr17	-	3493	14	novel_not_in_catalog	DVL2	novel	3018	15	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	14713	junction_2	126989.50289353813	NA	4	1	TRUE	NA	NA	NA	C	coding	459	1380	857	2236	5.0	-11	True	AATAAA	-18
PB.4723.5	chr17	-	2827	15	novel_in_catalog	DVL2	novel	3018	15	NA	NA	-49	-1	combination_of_known_junctions	FALSE	canonical	1	98091	junction_11	104079.42191935121	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	106	2304	5.0	2	True	AATAAA	-18
PB.4723.4	chr17	-	2771	15	full-splice_match	DVL2	ENST00000005340.9	3018	15	246	1	9	-1	multi-exon	FALSE	canonical	1	226779	junction_11	85415.74929841208	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2211	38	2248	5.0	8697	False	AATAAA	-18
PB.4723.7	chr17	-	2654	15	novel_not_in_catalog	DVL2	novel	3018	15	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	123335.58288520247	NA	1	1	TRUE	NA	NA	NA	C	coding	692	2079	256	2334	5.0	-1	True	AATAAA	-18
PB.4723.6	chr17	-	2683	15	novel_in_catalog	DVL2	novel	3018	15	NA	NA	24	-2	combination_of_known_junctions	FALSE	canonical	1	11806	junction_5	121596.48745656885	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	23	2161	5.0	-3	True	AATAAA	-17
PB.4723.9	chr17	-	2385	4	novel_in_catalog	DVL2	novel	3018	15	NA	NA	42	-2	intron_retention	FALSE	canonical	1	236999	junction_3	100094.13801461546	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	214	651	70.0	41	True	NA	NA
PB.4723.8	chr17	-	2633	15	novel_in_catalog	DVL2	novel	3018	15	NA	NA	33	-1	combination_of_known_junctions	FALSE	canonical	1	1233	junction_14	122904.52389311329	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	86	2110	5.0	8968	False	AATAAA	-18
PB.345.8	chr1	-	1939	10	full-splice_match	SLC2A1	ENST00000426263.8	3670	10	308	1423	0	-2	multi-exon	FALSE	canonical	1	1088809	junction_9	363720.8491859426	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	218	1696	20.0	-1	True	NA	NA
PB.10375.1	chr7	-	4218	25	novel_in_catalog	CARD11	novel	4366	25	NA	NA	-50591	-1	combination_of_known_junctions	TRUE	canonical	1	17494	junction_24	45040.93477041807	NA	0	NA	TRUE	NA	NA	NA	A	coding	1154	3465	258	3722	5.0	-41	False	ATTAAA	-18
PB.10616.11	chr7	+	1793	10	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8744	5792	intron_retention	FALSE	canonical	1	176	junction_2	108543.3174295741	NA	0	NA	TRUE	NA	NA	NA	B	coding	163	492	933	1424	30.0	1	True	AATAAA	-19
PB.9332.5	chr5	+	3369	19	incomplete-splice_match	RASA1	ENST00000274376.10	3752	25	-5	10880	-5	10146	3prime_fragment	FALSE	canonical	1	215356	junction_11	40645.016466609864	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	573	3176	20.0	0	True	AATAAA	-26
PB.9332.6	chr5	+	4654	24	novel_in_catalog	RASA1	novel	3752	25	NA	NA	-1	-4	no_combination_of_known_junctions	FALSE	canonical	1	8370	junction_19	87632.53113003804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1017	3054	569	3622	25.0	4	True	AATAAA	-18
PB.9332.7	chr5	+	4436	25	full-splice_match	RASA1	ENST00000274376.10	3752	25	0	-684	0	-308	multi-exon	FALSE	canonical	1	215356	junction_11	59708.90223198099	NA	1	NA	TRUE	NA	NA	NA	C	coding	1046	3141	568	3708	30.0	5	True	AGTAAA	-16
PB.9332.1	chr5	+	3729	24	novel_not_in_catalog	RASA1	novel	3752	25	NA	NA	-52	-3511	any annotated donor/acceptor	TRUE	canonical	1	8030	junction_23	75840.26761025246	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	620	3616	45.0	-47	True	AATAAA	-16
PB.9332.2	chr5	+	2022	10	incomplete-splice_match	RASA1	ENST00000274376.10	3752	25	-12	28263	-12	-7237	3prime_fragment	FALSE	canonical	1	221750	junction_5	36841.60959238921	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1443	580	2022	45.0	-7	True	TATAAA	-28
PB.9332.3	chr5	+	4032	25	full-splice_match	RASA1	ENST00000274376.10	3752	25	715	-995	-330	3	multi-exon	FALSE	canonical	1	215356	junction_11	59708.90223198099	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	189	2993	35.0	-2082	False	AATAAA	-25
PB.9200.4	chr5	+	5325	7	novel_not_in_catalog	C5orf51	novel	563	5	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	1006	junction_3	86298.0701322779	NA	2	NA	TRUE	NA	NA	NA	C	coding	231	696	294	989	15.0	-8	True	AATAAA	-14
PB.5738.2	chr19	-	2277	4	full-splice_match	ZNF20	ENST00000334213.9	3061	4	17	767	17	-767	multi-exon	FALSE	canonical	1	21116	junction_3	15002.12701215694	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	209	1807	40.0	-1	True	AATAAA	-16
PB.9332.9	chr5	+	3756	25	full-splice_match	RASA1	ENST00000456692.6	3776	25	6	14	-5	-2	multi-exon	FALSE	canonical	1	14669	junction_1	85261.74450860739	NA	1	NA	TRUE	NA	NA	NA	C	coding	870	2613	110	2722	30.0	-23	True	AATAAA	-20
PB.5738.1	chr19	-	2548	4	full-splice_match	ZNF20	ENST00000334213.9	3061	4	48	465	-4	-465	multi-exon	FALSE	canonical	1	21116	junction_3	15002.12701215694	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	178	1776	30.0	-10	True	ACTAAA	-15
PB.6981.11	chr2	+	3091	6	full-splice_match	RPE	ENST00000359429.10	2569	6	60	-582	1	-101	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	38	724	20.0	-18	True	ATTAAA	-20
PB.472.18	chr1	-	2804	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	-14	1279	-2	407	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	329	1954	60.0	-15	True	TTTAAA	-30
PB.9236.4	chr5	-	2910	3	intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	106	junction_2	489.5	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.6981.10	chr2	+	2176	6	full-splice_match	RPE	ENST00000359429.10	2569	6	84	309	-1	41	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	14	700	65.0	6	False	AATAGA	-39
PB.7677.2	chr22	-	1847	15	full-splice_match	CHEK2	ENST00000404276.6	1844	15	-3	0	-3	0	multi-exon	FALSE	canonical	1	115987	junction_11	47046.07541164039	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	62	1693	5.0	-4	True	ATTAAA	-18
PB.7677.3	chr22	-	1770	14	full-splice_match	CHEK2	ENST00000348295.7	1771	14	1	0	1	0	multi-exon	FALSE	canonical	1	15959	junction_5	64452.19075641862	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	72	1616	5.0	-14	True	ATTAAA	-18
PB.9337.48	chr5	-	2598	3	incomplete-splice_match	MEF2C	ENST00000513252.5	1063	7	-37	70825	0	1896	3prime_fragment	FALSE	canonical	1	217338	junction_2	208969.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.7677.1	chr22	-	1975	16	full-splice_match	CHEK2	ENST00000382580.6	1971	16	16	-20	-2	0	multi-exon	TRUE	canonical	1	10678	junction_13	71824.99406276032	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	61	1821	5.0	-3	True	ATTAAA	-18
PB.6981.12	chr2	+	2599	7	full-splice_match	RPE	ENST00000452025.5	779	7	-18	-1802	1	-8	multi-exon	FALSE	canonical	1	984	junction_6	46723.013137710484	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	38	715	40.0	-18	True	AATAAA	-17
PB.9652.1	chr5	-	2938	10	incomplete-splice_match	FAM193B	ENST00000506955.5	4604	12	15596	0	121	0	5prime_fragment	FALSE	canonical	1	103548	junction_6	120297.32694648344	NA	0	NA	TRUE	NA	NA	NA	A	coding	448	1347	1199	2545	15.0	-2207	False	GATAAA	-18
PB.11514.3	chr9	+	2798	22	novel_not_in_catalog	GALT	novel	678	2	NA	NA	0	10876	any annotated donor/acceptor	TRUE	canonical	1	9971	junction_10	100568.70988718054	NA	0	NA	TRUE	NA	NA	NA	B	coding	771	2316	70	2385	20.0	1	True	NA	NA
PB.5388.2	chr18	-	3963	21	novel_not_in_catalog	PPP4R1	novel	3925	20	NA	NA	7	-2	any annotated donor/acceptor	TRUE	canonical	1	11629	junction_9	156794.94368712118	NA	1	NA	TRUE	NA	NA	NA	C	coding	569	1710	43	1752	20.0	32	True	ATTAAA	-20
PB.7284.1	chr20	-	1478	7	novel_not_in_catalog	TTI1	novel	3958	9	NA	NA	5	6	any annotated donor/acceptor	FALSE	canonical	1	5063	junction_5	97256.63729949517	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	358	1038	35.0	-1	True	AATAAA	-28
PB.7164.2	chr20	-	5635	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	-5	4	any annotated donor/acceptor	TRUE	canonical	1	9200	junction_20	114064.78813765229	NA	5	1	TRUE	NA	NA	NA	C	coding	672	2019	391	2409	25.0	-36	False	AATAAA	-20
PB.7164.5	chr20	-	5357	19	novel_in_catalog	GPCPD1	novel	5489	20	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	1	48589	junction_4	111194.10344406037	NA	3	NA	TRUE	NA	NA	NA	C	coding	491	1476	661	2136	25.0	-11	True	AATAAA	-15
PB.7164.4	chr20	-	5377	20	full-splice_match	GPCPD1	ENST00000379019.5	5489	20	76	36	-26	-1	multi-exon	FALSE	canonical	1	30025	junction_16	111115.82725336408	NA	4	NA	TRUE	NA	NA	NA	C	coding	672	2019	138	2156	25.0	-14	True	AATAAA	-15
PB.11119.6	chr8	+	5988	9	novel_not_in_catalog	AC110275.1	novel	623	6	NA	NA	37899	8446	intron_retention	FALSE	canonical	0	0	junction_6	157289.8880248167	NA	7	1	TRUE	NA	NA	NA	B	coding	305	918	25	942	55.0	0	True	AATAAA	-16
PB.3875.6	chr15	-	1720	11	full-splice_match	GNB5	ENST00000358784.11	1735	11	18	-3	-10	3	multi-exon	FALSE	canonical	1	217128	junction_10	30032.189530568696	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	105	1166	5.0	-59	True	NA	NA
PB.3875.4	chr15	-	2127	11	full-splice_match	GNB5	ENST00000358784.11	1735	11	28	-420	0	-160	multi-exon	FALSE	canonical	1	217128	junction_10	30032.189530568696	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	95	1156	70.0	-49	True	NA	NA
PB.3875.5	chr15	-	2000	11	novel_not_in_catalog	GNB5	novel	8906	13	NA	NA	194	-160	any annotated donor/acceptor	FALSE	canonical	1	2771	junction_10	90326.32519819458	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	124	1029	70.0	679	False	NA	NA
PB.3875.2	chr15	-	2796	12	novel_not_in_catalog	GNB5	novel	8906	13	NA	NA	-32	10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	88133.0137714936	NA	2	1	TRUE	NA	NA	NA	C	coding	353	1062	54	1115	20.0	-8	True	AATAAA	-24
PB.3875.3	chr15	-	2293	11	full-splice_match	GNB5	ENST00000358784.11	1735	11	22	-580	-6	0	multi-exon	FALSE	canonical	1	217128	junction_10	30032.189530568696	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	101	1162	85.0	-55	True	NA	NA
PB.9801.12	chr6	+	2852	8	novel_not_in_catalog	BTN2A1	novel	2845	7	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	13256	junction_4	62928.00571109424	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	215	1765	20.0	4	True	NA	NA
PB.3875.1	chr15	-	2954	11	full-splice_match	GNB5	ENST00000358784.11	1735	11	28	-1247	0	-20	multi-exon	FALSE	canonical	1	217128	junction_10	30032.189530568696	NA	2	NA	TRUE	NA	NA	NA	C	coding	353	1062	95	1156	65.0	-49	True	NA	NA
PB.7667.1	chr22	+	2362	19	novel_not_in_catalog	GRK3	novel	9103	21	NA	NA	32	-6400	intron_retention	FALSE	canonical	1	1288	junction_18	54523.9070951144	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	98	1915	80.0	-83	False	AATATA	-20
PB.7667.3	chr22	+	3386	21	full-splice_match	GRK3	ENST00000324198.10	9103	21	104	5613	41	663	multi-exon	FALSE	canonical	1	57499	junction_1	45143.11377607885	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	89	2155	70.0	-74	False	NA	NA
PB.7667.2	chr22	+	2381	21	full-splice_match	GRK3	ENST00000324198.10	9103	21	99	6623	36	-347	multi-exon	FALSE	canonical	1	57499	junction_1	45143.11377607885	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	94	2160	25.0	-79	False	AATAAA	-22
PB.6471.11	chr2	-	1503	11	incomplete-splice_match	MTIF2	ENST00000263629.8	2528	16	17	7516	12	-4125	3prime_fragment	FALSE	canonical	1	164400	junction_4	67183.94553797804	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1203	300	1502	60.0	-4	True	NA	NA
PB.6471.10	chr2	-	1817	13	novel_in_catalog	MTIF2	novel	2386	15	NA	NA	12	-3589	combination_of_known_junctions	FALSE	canonical	1	18454	junction_9	140946.09595949162	NA	3	1	TRUE	NA	NA	NA	C	coding	460	1380	438	1817	65.0	-4	True	NA	NA
PB.3729.1	chr15	-	4078	1	full-splice_match	MAGEL2	ENST00000532292.3	4298	1	218	2	218	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	1171	3516	121	3636	30.0	269	False	NA	NA
PB.1098.2	chr1	+	8459	12	full-splice_match	UTP25	ENST00000491415.6	8446	12	-16	3	-16	-3	multi-exon	FALSE	canonical	1	163794	junction_5	22441.84745308278	NA	6	NA	TRUE	NA	NA	NA	C	coding	756	2271	74	2344	25.0	-4	True	ATTAAA	-16
PB.5388.1	chr18	-	3877	20	full-splice_match	PPP4R1	ENST00000400556.7	3925	20	-6	54	-5	-54	multi-exon	FALSE	canonical	1	76766	junction_18	127582.31506467955	NA	1	NA	TRUE	NA	NA	NA	C	coding	950	2853	81	2933	35.0	-6	True	AATAAA	-18
PB.589.1	chr1	+	3153	2	full-splice_match	SARS	ENST00000482384.1	804	2	-14	-2335	0	2335	multi-exon	FALSE	canonical	1	158267	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.10169.7	chr6	-	6060	39	novel_in_catalog	LAMA4	novel	6547	39	NA	NA	1	157	combination_of_known_junctions	FALSE	canonical	1	109876	junction_32	74772.8353644772	NA	0	NA	TRUE	NA	NA	NA	C	coding	1823	5472	288	5759	50.0	134	False	AATAAA	-15
PB.9236.6	chr5	-	6263	1	intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-1	True	AATAAA	-20
PB.10169.5	chr6	-	6269	39	full-splice_match	LAMA4	ENST00000389463.8	6297	39	35	-7	7	-7	multi-exon	FALSE	canonical	1	174854	junction_38	67148.45941614678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1816	5451	249	5699	50.0	1	True	AATAAA	-22
PB.10169.3	chr6	-	6398	39	full-splice_match	LAMA4	ENST00000522006.5	6438	39	144	-104	6	4	multi-exon	FALSE	canonical	1	121944	junction_38	70411.10512049063	NA	0	NA	TRUE	NA	NA	NA	C	coding	1816	5451	267	5717	20.0	0	True	AATAAA	-18
PB.10169.2	chr6	-	6409	39	full-splice_match	LAMA4	ENST00000389463.8	6297	39	7	-119	-5	5	multi-exon	TRUE	canonical	1	174854	junction_38	67148.45941614678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1816	5451	277	5727	20.0	128	False	AATAAA	-19
PB.2024.1	chr11	+	1967	2	novel_not_in_catalog	GPR137	novel	1274	5	NA	NA	209	-14399	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	31	True	NA	NA
PB.10169.8	chr6	-	6079	39	novel_in_catalog	LAMA4	novel	6547	39	NA	NA	-34	182	combination_of_known_junctions	FALSE	canonical	1	9192	junction_38	79954.67742640704	NA	0	NA	TRUE	NA	NA	NA	C	coding	1816	5451	303	5753	25.0	-35	False	AATAAA	-40
PB.9200.3	chr5	+	3046	5	incomplete-splice_match	C5orf51	ENST00000381647.6	5241	6	-13	7040	-13	3263	3prime_fragment	FALSE	canonical	1	138482	junction_1	30184.22681115917	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	33	653	90.0	-8	True	NA	NA
PB.11464.1	chr9	+	1584	1	antisense	novelGene_PSIP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1098.1	chr1	+	2688	12	full-splice_match	UTP25	ENST00000491415.6	8446	12	-12	5770	-12	-5770	multi-exon	FALSE	canonical	1	163794	junction_5	22441.84745308278	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	70	2340	15.0	0	True	AGTAAA	-17
PB.8578.3	chr3	-	3662	17	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	-15	-61	combination_of_known_junctions	FALSE	canonical	1	16472	junction_13	66797.13422227479	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	540	1931	100.0	1	True	NA	NA
PB.9664.1	chr5	+	5344	5	full-splice_match	ZNF354C	ENST00000315475.6	5411	5	-44	111	-44	-111	multi-exon	FALSE	canonical	1	19285	junction_1	5880.40268072689	NA	4	NA	TRUE	NA	NA	NA	C	coding	554	1665	351	2015	15.0	-2	True	NA	NA
PB.9664.2	chr5	+	5445	5	full-splice_match	ZNF354C	ENST00000315475.6	5411	5	-42	8	-42	-8	multi-exon	FALSE	canonical	1	19285	junction_1	5880.40268072689	NA	5	NA	TRUE	NA	NA	NA	C	coding	554	1665	349	2013	50.0	0	True	AATAAA	-19
PB.9664.3	chr5	+	5039	4	novel_not_in_catalog	ZNF354C	novel	5411	5	NA	NA	181	-115	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	16761.043013156694	NA	5	1	TRUE	NA	NA	NA	C	coding	498	1497	218	1714	15.0	223	False	NA	NA
PB.8578.7	chr3	-	4995	15	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	1	-61	intron_retention	FALSE	canonical	1	40657	junction_13	57544.617514213634	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	64	1827	100.0	-17	True	NA	NA
PB.8578.5	chr3	-	3412	15	full-splice_match	IGF2BP2	ENST00000421047.3	1711	15	0	-1701	0	-61	multi-exon	FALSE	canonical	1	12261	junction_14	63002.920830777235	NA	4	NA	TRUE	NA	NA	NA	C	coding	536	1611	71	1681	100.0	-1	True	NA	NA
PB.8578.4	chr3	-	3548	15	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	-14	-61	no_combination_of_known_junctions	FALSE	canonical	1	6646	junction_14	63714.15560701001	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	426	1817	100.0	2	True	NA	NA
PB.5221.5	chr17	+	3011	14	full-splice_match	COG1	ENST00000299886.8	3079	14	65	3	-17	0	multi-exon	FALSE	canonical	1	68143	junction_1	108465.42101757918	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	16	2958	20.0	0	True	AATAAA	-22
PB.5221.4	chr17	+	2391	9	incomplete-splice_match	COG1	ENST00000438720.7	4051	13	-28	4728	-28	-2412	3prime_fragment	FALSE	canonical	1	68143	junction_1	70251.7183468668	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2364	27	2390	60.0	-11	True	NA	NA
PB.8578.9	chr3	-	3286	15	full-splice_match	IGF2BP2	ENST00000346192.7	3291	15	-7	12	-7	-12	multi-exon	FALSE	canonical	1	21258	junction_6	62593.614864302355	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	72	1742	80.0	9	True	NA	NA
PB.8578.8	chr3	-	3398	16	full-splice_match	IGF2BP2	ENST00000382199.6	3688	16	42	248	-2	-12	multi-exon	FALSE	canonical	1	37161	junction_1	59829.25970556175	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	55	1854	80.0	-8	True	NA	NA
PB.5221.1	chr17	+	3089	14	novel_in_catalog	AC097641.1	novel	588	3	NA	NA	28020	11911	no_combination_of_known_junctions	FALSE	canonical	1	20299	junction_1	115963.78237920799	NA	2	NA	TRUE	NA	NA	NA	B	coding	846	2541	496	3036	20.0	-58	False	AATAAA	-22
PB.5221.3	chr17	+	4084	13	full-splice_match	COG1	ENST00000438720.7	4051	13	-33	0	-33	0	multi-exon	TRUE	canonical	1	68143	junction_1	112513.19894828513	NA	5	1	TRUE	NA	NA	NA	C	coding	962	2889	32	2920	20.0	-16	True	AATAAA	-22
PB.5221.2	chr17	+	4106	13	novel_in_catalog	AC097641.1	novel	588	3	NA	NA	28060	11911	intron_retention	FALSE	canonical	1	20299	junction_1	120252.17562720597	NA	0	NA	TRUE	NA	NA	NA	B	coding	828	2487	456	2942	20.0	-18	True	AATAAA	-22
PB.7156.2	chr20	-	1627	7	full-splice_match	RNF24	ENST00000545616.2	1128	7	-22	-477	15	477	multi-exon	FALSE	canonical	1	15996	junction_6	66457.86041900703	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	145	654	95.0	-32	True	NA	NA
PB.7156.1	chr20	-	1796	6	novel_not_in_catalog	RNF24	novel	7453	6	NA	NA	13	477	any annotated donor/acceptor	FALSE	canonical	1	4099	junction_5	69924.67125986364	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	377	823	95.0	-34	True	NA	NA
PB.1409.5	chr10	-	2799	11	full-splice_match	SGMS1	ENST00000361781.6	3744	11	-25	970	-25	-970	multi-exon	FALSE	canonical	1	91932	junction_10	55590.777667613176	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	986	2227	75.0	1777	False	NA	NA
PB.12211.11	chrX	-	3576	5	incomplete-splice_match	RBM41	ENST00000372479.7	1662	7	-18	18698	1	2600	3prime_fragment	FALSE	canonical	1	58848	junction_1	44534.19103621396	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	50	982	20.0	-1	True	NA	NA
PB.12211.10	chrX	-	3648	6	incomplete-splice_match	RBM41	ENST00000495517.5	3315	8	1	19536	1	2600	3prime_fragment	FALSE	canonical	1	57144	junction_1	42180.576964285356	NA	2	NA	TRUE	NA	NA	NA	C	coding	334	1005	50	1054	20.0	-1	True	NA	NA
PB.1309.8	chr10	-	2225	14	full-splice_match	DCLRE1C	ENST00000378278.6	2354	14	-34	163	-10	-146	multi-exon	FALSE	canonical	1	57724	junction_12	14838.153736489332	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	73	2151	60.0	3	True	NA	NA
PB.1409.4	chr10	-	3285	6	novel_in_catalog	SGMS1	novel	3634	10	NA	NA	34	-111	combination_of_known_junctions	FALSE	canonical	1	48896	junction_5	83382.49542296033	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	613	1854	35.0	-2	True	AATAAA	-26
PB.1309.6	chr10	-	2319	13	full-splice_match	DCLRE1C	ENST00000378246.6	2637	13	9	309	9	0	multi-exon	FALSE	canonical	1	10659	junction_9	24956.72342762678	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	459	2099	100.0	-1	True	NA	NA
PB.1309.7	chr10	-	2266	12	full-splice_match	DCLRE1C	ENST00000378249.5	2246	12	-37	17	10	0	multi-exon	FALSE	canonical	1	5672	junction_11	33089.83072243902	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	313	2046	100.0	0	True	NA	NA
PB.1309.4	chr10	-	2384	14	full-splice_match	DCLRE1C	ENST00000378278.6	2354	14	-47	17	0	0	multi-exon	FALSE	canonical	1	57724	junction_12	14838.153736489332	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	86	2164	100.0	-10	True	NA	NA
PB.1309.5	chr10	-	2464	15	full-splice_match	DCLRE1C	ENST00000378258.5	2463	15	-18	17	5	0	multi-exon	FALSE	canonical	1	23575	junction_13	24008.182315342714	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	526	2244	100.0	-5	True	NA	NA
PB.1309.2	chr10	-	2693	14	full-splice_match	DCLRE1C	ENST00000378278.6	2354	14	-47	-292	0	0	multi-exon	FALSE	canonical	1	57724	junction_12	14838.153736489332	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	86	2164	100.0	-10	True	NA	NA
PB.5343.6	chr17	+	1992	5	full-splice_match	SLC16A3	ENST00000582743.5	2002	5	12	-2	-1	0	multi-exon	FALSE	canonical	1	780041	junction_1	383313.269077249	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	90	1487	25.0	2	True	AATAAA	-28
PB.1309.1	chr10	-	2950	15	novel_not_in_catalog	DCLRE1C	novel	3532	14	NA	NA	-1	-872	any annotated donor/acceptor	FALSE	canonical	1	3772	junction_1	24939.948398143108	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	87	1931	100.0	-11	True	NA	NA
PB.2778.17	chr12	-	1801	11	incomplete-splice_match	PPP1R12A	ENST00000547330.5	2275	15	-68	11265	0	-1683	3prime_fragment	FALSE	canonical	1	414631	junction_10	63996.12078681019	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1527	274	1800	60.0	-12	True	NA	NA
PB.2778.16	chr12	-	1925	13	incomplete-splice_match	PPP1R12A	ENST00000547330.5	2275	15	-48	9077	20	505	3prime_fragment	FALSE	canonical	1	353018	junction_1	73314.85474777604	NA	10	NA	TRUE	NA	NA	NA	C	coding	557	1671	254	1924	25.0	8	True	NA	NA
PB.2778.15	chr12	-	2060	14	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	23	4	combination_of_known_junctions	FALSE	canonical	1	12243	junction_2	153130.07499910254	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1809	251	2059	75.0	11	True	AAAACA	-32
PB.5343.7	chr17	+	2094	5	full-splice_match	SLC16A3	ENST00000392339.5	2074	5	-37	17	-37	0	multi-exon	FALSE	canonical	1	7641	junction_1	713811.1463830525	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	192	1589	25.0	-7122	False	AATAAA	-28
PB.2778.13	chr12	-	3675	14	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	-26	4	intron_retention	FALSE	canonical	1	414631	junction_13	75214.0377139186	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	232	1884	75.0	-19	True	AAAACA	-32
PB.2778.12	chr12	-	2169	14	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	20	8	combination_of_known_junctions	FALSE	canonical	1	11116	junction_9	169041.89200929704	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	254	2167	75.0	8	True	AAAACA	-36
PB.2778.11	chr12	-	2379	16	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	13	4	combination_of_known_junctions	FALSE	canonical	1	33203	junction_4	145035.00763112333	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2118	261	2378	75.0	1	True	AAAACA	-32
PB.2778.10	chr12	-	3105	14	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	-26	8	intron_retention	FALSE	canonical	1	109492	junction_2	131155.92080208877	NA	2	NA	TRUE	NA	NA	NA	C	coding	550	1653	232	1884	75.0	-19	True	AAAACA	-36
PB.472.17	chr1	-	3260	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	-4	813	-4	-164	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	319	1944	35.0	-5	True	TTTAAA	-19
PB.9236.3	chr5	-	7076	1	intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.11290.8	chr8	-	2468	7	full-splice_match	SLC25A32	ENST00000297578.8	2891	7	-87	510	-2	-510	multi-exon	FALSE	canonical	1	266335	junction_5	58812.23729708715	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	255	1202	50.0	50	False	AATAAA	-36
PB.2778.19	chr12	-	2981	5	incomplete-splice_match	PPP1R12A	ENST00000550510.5	631	6	-445	5248	-30	1768	3prime_fragment	FALSE	canonical	1	414631	junction_4	43418.1021291811	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	236	1045	100.0	-23	True	NA	NA
PB.2778.18	chr12	-	3243	8	incomplete-splice_match	PPP1R12A	ENST00000547330.5	2275	15	54	21556	54	2322	3prime_fragment	FALSE	canonical	1	414631	junction_7	71391.24095676541	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	152	1276	30.0	20	True	AATAAA	-10
PB.12182.1	chrX	+	2252	20	novel_in_catalog	CENPI	novel	622	4	NA	NA	-81	6819	no_combination_of_known_junctions	FALSE	canonical	1	29016	junction_1	21907.42821263981	NA	1	1	TRUE	NA	NA	NA	B	coding	681	2043	208	2250	15.0	-67	False	TATAAA	-15
PB.12182.2	chrX	+	2359	21	novel_not_in_catalog	CENPI	novel	622	4	NA	NA	-52	6819	any annotated donor/acceptor	FALSE	canonical	1	10181	junction_2	27673.58332254788	NA	0	NA	TRUE	NA	NA	NA	B	coding	681	2043	315	2357	15.0	-38	True	TATAAA	-15
PB.5343.2	chr17	+	2061	5	full-splice_match	SLC16A3	ENST00000392341.5	2086	5	14	11	-1	6	multi-exon	FALSE	canonical	1	14237	junction_1	710973.1378175884	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	153	1550	15.0	-28	True	AATAAA	-34
PB.8660.11	chr4	-	1966	12	incomplete-splice_match	LETM1	ENST00000302787.2	5462	14	114	5396	114	2497	3prime_fragment	FALSE	canonical	1	94664	junction_7	88850.74011262924	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1782	184	1965	55.0	1	True	NA	NA
PB.1409.2	chr10	-	3710	11	full-splice_match	SGMS1	ENST00000361781.6	3744	11	27	7	21	-7	multi-exon	FALSE	canonical	1	91932	junction_10	55590.777667613176	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	934	2175	35.0	-34	True	AATAAA	-13
PB.2409.1	chr12	+	1260	6	full-splice_match	CD27	ENST00000266557.3	1338	6	74	4	74	-4	multi-exon	FALSE	canonical	1	302538	junction_1	42654.25229727981	NA	0	NA	TRUE	NA	NA	NA	A	coding	260	783	156	938	10.0	-14	True	AATAAA	-18
PB.10028.4	chr6	+	4548	2	full-splice_match	PAQR8	ENST00000442253.2	4738	2	89	101	89	-15	multi-exon	FALSE	canonical	1	45187	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	86	1150	90.0	-4	True	NA	NA
PB.10028.3	chr6	+	4738	2	full-splice_match	PAQR8	ENST00000442253.2	4738	2	0	0	0	0	multi-exon	FALSE	canonical	1	45187	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	175	1239	15.0	-23	True	ATTAAA	-18
PB.10028.2	chr6	+	2773	2	full-splice_match	PAQR8	ENST00000442253.2	4738	2	-2	1967	-2	-1881	multi-exon	FALSE	canonical	1	45187	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	177	1241	40.0	-25	True	TATAAA	-18
PB.10028.1	chr6	+	3172	2	full-splice_match	PAQR8	ENST00000442253.2	4738	2	-48	1614	-48	-1528	multi-exon	FALSE	canonical	1	45187	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	223	1287	40.0	1	True	AATAAA	-29
PB.8586.4	chr3	+	5235	9	novel_in_catalog	DNAJB11	novel	2398	11	NA	NA	21	-2	intron_retention	FALSE	canonical	1	721199	junction_1	309621.68084936234	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	200	709	5.0	-21	True	AATACA	-21
PB.8586.5	chr3	+	1645	10	full-splice_match	DNAJB11	ENST00000265028.7	1688	10	41	2	41	-2	multi-exon	FALSE	canonical	1	721199	junction_1	302014.88066678576	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	180	1256	5.0	-1	True	AATACA	-21
PB.7554.1	chr21	+	2488	2	full-splice_match	TSPEAR-AS2	ENST00000354333.5	2422	2	-67	1	-67	-1	multi-exon	FALSE	canonical	1	5456	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-5954	False	CATAAA	-15
PB.8586.2	chr3	+	4882	9	novel_in_catalog	DNAJB11	novel	2398	11	NA	NA	10	-360	intron_retention	FALSE	canonical	1	721199	junction_1	309621.68084936234	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	211	720	55.0	-32	True	AATAAA	-15
PB.8586.3	chr3	+	5720	8	novel_in_catalog	DNAJB11	novel	2398	11	NA	NA	13	0	intron_retention	FALSE	canonical	1	721199	junction_1	328773.59575369844	NA	5	NA	TRUE	NA	NA	NA	C	coding	169	510	208	717	10.0	-29	True	AATACA	-17
PB.11054.10	chr8	+	3324	11	full-splice_match	ESCO2	ENST00000305188.12	3922	11	187	411	19	-411	multi-exon	FALSE	canonical	1	86831	junction_1	20774.16344982392	NA	2	NA	TRUE	NA	NA	NA	C	coding	601	1806	52	1857	35.0	0	True	ATTAAA	-21
PB.11054.13	chr8	+	1779	2	incomplete-splice_match	ESCO2	ENST00000397418.4	720	7	11610	3323	11610	-411	internal_fragment	FALSE	canonical	1	106553	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	40	123	190	312	35.0	NA	False	ATTAAA	-21
PB.4410.4	chr16	-	2376	9	full-splice_match	NETO2	ENST00000562435.5	7481	9	-20	5125	-20	162	multi-exon	FALSE	canonical	1	114944	junction_1	43480.116547681886	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	406	1983	10.0	5	True	AATAAA	-17
PB.4410.1	chr16	-	3489	9	full-splice_match	NETO2	ENST00000562435.5	7481	9	52	3940	52	-9	multi-exon	TRUE	canonical	1	114944	junction_1	43480.116547681886	NA	7	1	TRUE	NA	NA	NA	C	coding	525	1578	334	1911	40.0	-1	True	AGTAAA	-10
PB.4410.2	chr16	-	3390	9	full-splice_match	NETO2	ENST00000562435.5	7481	9	0	4091	0	-160	multi-exon	FALSE	canonical	1	114944	junction_1	43480.116547681886	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	386	1963	25.0	-1	True	ATTAAA	-17
PB.4410.3	chr16	-	3318	9	full-splice_match	NETO2	ENST00000303155.9	3241	9	-237	160	51	-160	multi-exon	FALSE	canonical	1	61350	junction_4	58046.355571969376	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	335	1891	25.0	-2	True	ATTAAA	-17
PB.1502.17	chr10	+	2713	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-12	-1	no_combination_of_known_junctions	FALSE	canonical	1	6118	junction_4	194737.09995786627	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	340	1062	15.0	0	True	AATATA	-10
PB.1502.16	chr10	+	2660	11	full-splice_match	TSPAN14	ENST00000372158.5	1095	11	-36	-1529	-5	-58	multi-exon	TRUE	canonical	1	7759	junction_1	194975.88181988048	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	254	1066	15.0	7	True	NA	NA
PB.1502.15	chr10	+	4675	9	full-splice_match	TSPAN14	ENST00000429989.7	16183	9	144	11364	-12	-872	multi-exon	FALSE	canonical	1	135973	junction_1	120947.92493614503	NA	2	NA	TRUE	NA	NA	NA	C	coding	270	813	80	892	70.0	0	True	NA	NA
PB.1502.14	chr10	+	4820	9	full-splice_match	TSPAN14	ENST00000429989.7	16183	9	144	11219	-12	-727	multi-exon	FALSE	canonical	1	135973	junction_1	120947.92493614503	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	80	892	95.0	0	True	NA	NA
PB.1502.13	chr10	+	5550	9	full-splice_match	TSPAN14	ENST00000429989.7	16183	9	143	10490	-13	2	multi-exon	FALSE	canonical	1	135973	junction_1	120947.92493614503	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	81	893	40.0	-1	True	AATAAA	-27
PB.1674.1	chr10	-	6648	22	full-splice_match	EIF3A	ENST00000369144.7	6646	22	-6	4	-6	-4	multi-exon	FALSE	canonical	1	780023	junction_21	513062.870659706	NA	2	NA	TRUE	NA	NA	NA	C	coding	1382	4149	135	4283	40.0	6	True	AATAAA	-14
PB.1502.11	chr10	+	4862	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-14	-727	no_combination_of_known_junctions	FALSE	canonical	1	6396	junction_2	196032.85405925527	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	122	934	95.0	-2	True	NA	NA
PB.1502.10	chr10	+	2456	8	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-17	-2	no_combination_of_known_junctions	FALSE	canonical	1	6566	junction_1	171181.69976790325	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	152	799	5.0	-5	True	AATATA	-16
PB.9551.5	chr5	+	3937	3	full-splice_match	GRPEL2	ENST00000416916.2	1006	3	-3	-2928	-3	-1	multi-exon	FALSE	canonical	1	6984	junction_2	68390.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	42	410	15.0	-20	True	AATAAA	-21
PB.9551.4	chr5	+	3919	4	full-splice_match	GRPEL2	ENST00000329271.7	4089	4	59	111	-13	-111	multi-exon	FALSE	canonical	1	68632	junction_3	36874.57743034714	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	52	729	60.0	-30	True	AATAAA	-21
PB.9551.3	chr5	+	2121	4	full-splice_match	GRPEL2	ENST00000329271.7	4089	4	45	1923	-27	1006	multi-exon	FALSE	canonical	1	68632	junction_3	36874.57743034714	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	66	743	35.0	-4261	False	AATAAA	-17
PB.9551.2	chr5	+	2853	4	full-splice_match	GRPEL2	ENST00000329271.7	4089	4	7	1229	7	-1229	multi-exon	FALSE	canonical	1	68632	junction_3	36874.57743034714	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	104	781	15.0	-4299	False	AAGAAA	-14
PB.1502.19	chr10	+	4960	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-11	-727	no_combination_of_known_junctions	FALSE	canonical	1	64054	junction_1	155678.77516155652	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	220	1032	95.0	1	True	NA	NA
PB.1502.18	chr10	+	2571	9	full-splice_match	TSPAN14	ENST00000372157.6	855	9	-11	-1705	-11	-1	multi-exon	FALSE	canonical	1	6118	junction_3	183067.37295033623	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	198	920	15.0	1	True	AATATA	-10
PB.1098.4	chr1	+	3529	10	novel_in_catalog	UTP25	novel	8446	12	NA	NA	-9	-5816	intron_retention	FALSE	canonical	1	163794	junction_5	24256.494177390472	NA	2	NA	TRUE	NA	NA	NA	C	coding	567	1704	67	1770	30.0	3	True	CATAAA	-14
PB.4426.2	chr16	-	4506	3	full-splice_match	SALL1	ENST00000251020.8	5146	3	-65	705	27	384	multi-exon	FALSE	canonical	1	55992	junction_2	18841.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1324	3975	100	4074	20.0	993	False	AATAAA	-16
PB.4426.1	chr16	-	5226	3	full-splice_match	SALL1	ENST00000251020.8	5146	3	-78	-2	14	2	multi-exon	FALSE	canonical	1	55992	junction_2	18841.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	1324	3975	113	4087	15.0	980	False	GATAAA	-16
PB.6008.2	chr19	-	2319	16	novel_not_in_catalog	COQ8B	novel	2443	15	NA	NA	-24	0	any annotated donor/acceptor	FALSE	canonical	1	6629	junction_15	91388.7148546374	NA	0	NA	TRUE	NA	NA	NA	B	coding	544	1635	180	1814	5.0	-35	False	AATAAA	-17
PB.472.10	chr1	-	3858	11	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	4	-7	no_combination_of_known_junctions	FALSE	canonical	1	9414	junction_1	67838.23217596402	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	311	1666	40.0	3	True	AATAAA	-20
PB.6822.7	chr2	+	2334	14	novel_in_catalog	PPIG	novel	6368	14	NA	NA	143	-208	combination_of_known_junctions	FALSE	canonical	1	90749	junction_1	119906.44488302206	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2154	180	2333	75.0	-10	True	NA	NA
PB.345.1	chr1	-	2991	10	full-splice_match	SLC2A1	ENST00000426263.8	3670	10	243	436	-65	345	multi-exon	TRUE	canonical	1	1088809	junction_9	363720.8491859426	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	283	1761	25.0	2142	False	NA	NA
PB.6519.2	chr2	+	1454	9	full-splice_match	PLEK	ENST00000234313.7	2869	9	109	1306	109	430	multi-exon	FALSE	canonical	1	571712	junction_1	211633.07089479038	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	71	1123	70.0	0	True	NA	NA
PB.6786.15	chr2	-	2902	25	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	22	105	any annotated donor/acceptor	FALSE	canonical	0	0	junction_21	304744.27530795755	NA	3	1	TRUE	NA	NA	NA	B	coding	723	2172	626	2797	60.0	-1	True	NA	NA
PB.1302.1	chr10	-	3016	9	full-splice_match	SEPHS1	ENST00000327347.9	3273	9	249	8	232	7	multi-exon	FALSE	canonical	1	86503	junction_8	129667.01493223904	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	128	1306	25.0	547	False	AATAAA	-25
PB.7232.9	chr20	+	5098	7	full-splice_match	POFUT1	ENST00000375749.7	5235	7	-10	147	-10	-147	multi-exon	FALSE	canonical	1	240350	junction_1	41792.834554967536	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	73	1239	65.0	-20	True	AATAAA	-18
PB.7232.8	chr20	+	4978	6	full-splice_match	POFUT1	ENST00000486717.5	959	6	-67	-3952	-12	-147	multi-exon	FALSE	canonical	1	23718	junction_1	125635.18262270324	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	277	1119	65.0	-22	True	AATAAA	-18
PB.8827.37	chr4	-	2709	12	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	11	14	combination_of_known_junctions	FALSE	canonical	1	30987	junction_10	521837.700542171	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	305	1654	15.0	-62	True	AGTAAA	-16
PB.7232.3	chr20	+	2422	6	novel_not_in_catalog	POFUT1	novel	5235	7	NA	NA	-21	-5541	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	148322.23067038873	NA	18	NA	TRUE	NA	NA	NA	C	coding	206	621	84	704	85.0	-31	False	NA	NA
PB.7232.2	chr20	+	5253	7	full-splice_match	POFUT1	ENST00000375749.7	5235	7	-28	10	-28	-10	multi-exon	FALSE	canonical	1	240350	junction_1	41792.834554967536	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	91	1257	30.0	4	True	NA	NA
PB.7232.1	chr20	+	3329	7	full-splice_match	POFUT1	ENST00000375749.7	5235	7	-31	1937	-31	14	multi-exon	FALSE	canonical	1	240350	junction_1	41792.834554967536	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	94	1260	20.0	1	True	NA	NA
PB.7232.7	chr20	+	5115	6	full-splice_match	POFUT1	ENST00000486717.5	959	6	-67	-4089	-12	-10	multi-exon	FALSE	canonical	1	23718	junction_1	125635.18262270324	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	277	1119	30.0	-22	True	NA	NA
PB.1302.3	chr10	-	2381	9	full-splice_match	SEPHS1	ENST00000327347.9	3273	9	248	644	231	12	multi-exon	FALSE	canonical	1	86503	junction_8	129667.01493223904	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	129	1307	25.0	546	False	AATAAA	-29
PB.7232.5	chr20	+	4511	6	full-splice_match	POFUT1	ENST00000486717.5	959	6	-67	-3485	-12	-614	multi-exon	FALSE	canonical	1	23718	junction_1	125635.18262270324	NA	4	NA	TRUE	NA	NA	NA	C	coding	280	843	277	1119	40.0	-22	True	NA	NA
PB.7232.4	chr20	+	4808	7	full-splice_match	POFUT1	ENST00000375749.7	5235	7	-13	440	-13	-440	multi-exon	FALSE	canonical	1	240350	junction_1	41792.834554967536	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	76	1242	80.0	-23	True	NA	NA
PB.8827.35	chr4	-	2619	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-23	13	-23	-13	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	242	1591	55.0	-14	False	TATAAA	-16
PB.6007.3	chr19	+	2283	12	novel_in_catalog	LTBP4	novel	5032	33	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	142150	junction_3	308199.08037868066	NA	0	NA	TRUE	NA	NA	NA	B	coding	497	1494	520	2013	5.0	-19	True	ATTAAA	-19
PB.8827.32	chr4	-	3424	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-14	-801	-14	801	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	3	NA	TRUE	NA	NA	NA	C	coding	449	1350	233	1582	20.0	-5	True	AGTAAA	-24
PB.1891.2	chr11	-	1188	7	full-splice_match	APIP	ENST00000395787.3	1366	7	116	62	-32	13	multi-exon	FALSE	canonical	1	47320	junction_1	65108.01427030487	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	100	828	20.0	-20	True	AATAAA	-28
PB.1891.3	chr11	-	6164	5	novel_in_catalog	APIP	novel	4583	8	NA	NA	-46	-2	intron_retention	FALSE	canonical	1	68875	junction_3	60955.9450930547	NA	9	NA	TRUE	NA	NA	NA	C	coding	163	492	4712	5203	25.0	100	False	AATAAA	-13
PB.6389.1	chr2	+	3041	9	novel_in_catalog	PPP1CB	novel	721	5	NA	NA	-91	-610	combination_of_known_junctions	FALSE	canonical	1	7690	junction_1	670869.8150446996	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	323	1306	25.0	-565	False	AGTAAA	-16
PB.1302.4	chr10	-	1366	9	full-splice_match	SEPHS1	ENST00000327347.9	3273	9	262	1645	245	-989	multi-exon	FALSE	canonical	1	86503	junction_8	129667.01493223904	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	115	1293	55.0	-7	True	ATTAAA	-7
PB.472.12	chr1	-	3392	13	novel_in_catalog	ANKRD13C	novel	4069	13	NA	NA	3	7	combination_of_known_junctions	FALSE	canonical	1	13813	junction_1	61360.05602566073	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	324	1835	30.0	-10	True	AATAAA	-22
PB.11290.3	chr8	-	2860	7	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	1	2523	junction_2	124970.59506506586	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	169	885	35.0	1	True	NA	NA
PB.12213.10	chrX	-	1834	3	full-splice_match	TSC22D3	ENST00000372390.8	1812	3	-32	10	-32	-7	multi-exon	FALSE	canonical	1	71584	junction_2	928688.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	77	234	313	546	40.0	5400	False	AATAAA	-17
PB.6102.10	chr19	+	2045	10	novel_not_in_catalog	SAE1	novel	723	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	21762	junction_5	513758.19937653287	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	43	1068	10.0	0	True	AATAAA	-16
PB.6102.11	chr19	+	2174	10	novel_not_in_catalog	SAE1	novel	723	7	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	2085	junction_9	489529.5597617607	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	42	1019	10.0	1	True	AATAAA	-13
PB.8827.31	chr4	-	3624	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-11	-1004	-11	-603	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	230	1579	35.0	-2	True	NA	NA
PB.10764.8	chr7	-	1746	7	full-splice_match	ORC5	ENST00000485726.1	1214	7	-3	-529	-3	529	multi-exon	FALSE	canonical	1	11817	junction_1	92081.38649767028	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	109	846	55.0	0	True	TATAAA	-12
PB.4054.1	chr15	-	2187	1	antisense	novelGene_AKAP13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	TTTAAA	-44
PB.6519.9	chr2	+	3154	8	novel_in_catalog	PLEK	novel	2869	9	NA	NA	109	430	intron_retention	FALSE	canonical	1	571712	junction_1	206490.72993374648	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	71	760	70.0	0	True	NA	NA
PB.1910.2	chr11	+	2928	3	full-splice_match	SLC35C1	ENST00000442528.2	1756	3	282	-1454	-52	-3	multi-exon	FALSE	canonical	1	29971	junction_1	75111.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	196	1251	15.0	-52	True	AATAAA	-9
PB.10764.1	chr7	-	1920	14	full-splice_match	ORC5	ENST00000297431.8	1958	14	36	2	-2	0	multi-exon	FALSE	canonical	1	196672	junction_13	39596.35159796698	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	108	1415	20.0	1	True	AATAAA	-22
PB.10764.2	chr7	-	1867	13	novel_in_catalog	ORC5	novel	1958	14	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	3255	junction_7	75342.0581783877	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	104	838	20.0	5	True	AATAAA	-22
PB.10764.3	chr7	-	1807	13	novel_in_catalog	ORC5	novel	1958	14	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	1119	junction_12	82427.48798030337	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	88	1302	20.0	21	True	AATAAA	-22
PB.10764.4	chr7	-	4797	6	incomplete-splice_match	ORC5	ENST00000447452.6	1409	9	-23	16220	20	6	3prime_fragment	FALSE	canonical	1	196672	junction_5	39238.55718346433	NA	17	NA	TRUE	NA	NA	NA	C	coding	234	705	77	781	10.0	32	True	AATAAA	-17
PB.10764.5	chr7	-	4537	7	full-splice_match	ORC5	ENST00000485726.1	1214	7	6	-3329	-3	6	multi-exon	FALSE	canonical	1	11817	junction_1	92081.38649767028	NA	3	NA	TRUE	NA	NA	NA	C	coding	245	738	100	837	10.0	9	True	AATAAA	-17
PB.10764.6	chr7	-	2993	7	full-splice_match	ORC5	ENST00000485726.1	1214	7	-4	-1775	-4	-1548	multi-exon	FALSE	canonical	1	11817	junction_1	92081.38649767028	NA	5	1	TRUE	NA	NA	NA	C	coding	245	738	110	847	30.0	-1	True	AATAAA	-19
PB.10764.7	chr7	-	2074	7	full-splice_match	ORC5	ENST00000485726.1	1214	7	-30	-830	8	830	multi-exon	FALSE	canonical	1	11817	junction_1	92081.38649767028	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	136	873	10.0	-27	True	AATAAA	-28
PB.1021.13	chr1	+	5030	5	incomplete-splice_match	NEK7	ENST00000367385.8	4149	10	57	53812	22	5985	3prime_fragment	FALSE	canonical	1	247655	junction_1	53331.34390944504	NA	3	NA	TRUE	NA	NA	NA	C	coding	145	438	286	723	85.0	22	True	NA	NA
PB.9575.1	chr5	+	2013	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	196	-1194	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	2	1	TRUE	NA	NA	NA	C	coding	193	582	130	711	5.0	-2	True	AATAAA	-23
PB.1343.18	chr10	-	1923	9	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	8	358	intron_retention	FALSE	canonical	1	560	junction_8	127542.91901160174	NA	3	NA	TRUE	NA	NA	NA	C	coding	333	1002	487	1488	45.0	-11	True	AAGAAA	-18
PB.1343.19	chr10	-	2148	13	full-splice_match	ACBD5	ENST00000396271.7	3921	13	-14	1787	-14	352	multi-exon	FALSE	canonical	1	65396	junction_12	70749.2716893707	NA	4	1	TRUE	NA	NA	NA	C	coding	525	1578	142	1719	40.0	2216	False	AAGAAA	-12
PB.2413.1	chr12	-	632	3	full-splice_match	MRPL51	ENST00000229238.4	1234	3	336	266	33	0	multi-exon	FALSE	canonical	1	3421896	junction_1	170587.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	128	387	127	513	35.0	-1	True	AATAAA	-16
PB.7425.3	chr20	+	2296	7	full-splice_match	TPD52L2	ENST00000346249.8	2297	7	-2	3	-2	-3	multi-exon	FALSE	canonical	1	789303	junction_1	273941.55167140835	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	79	699	10.0	17	True	AATAAA	-23
PB.7425.2	chr20	+	2240	6	full-splice_match	TPD52L2	ENST00000348257.9	2237	6	-13	10	-13	-10	multi-exon	FALSE	canonical	1	350721	junction_3	435463.9645727761	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	90	650	15.0	6	True	AATAAA	-16
PB.1343.12	chr10	-	3621	12	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	-20	-3	no_combination_of_known_junctions	FALSE	canonical	1	12460	junction_6	106092.90068614394	NA	2	NA	TRUE	NA	NA	NA	C	coding	422	1269	143	1411	35.0	-11	True	AATAAA	-12
PB.3344.5	chr14	+	2511	8	novel_in_catalog	AL136295.5	novel	4798	21	NA	NA	10051	-839	intron_retention	FALSE	canonical	1	493528	junction_6	127950.36519331252	NA	1	NA	TRUE	NA	NA	NA	B	coding	422	1269	72	1340	25.0	-24	True	AATAAA	-17
PB.1343.10	chr10	-	3815	12	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	15	-3	no_combination_of_known_junctions	FALSE	canonical	1	398	junction_1	108720.5828504375	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	117	1691	35.0	2210	False	AATAAA	-12
PB.1343.11	chr10	-	3716	13	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	18	-3	no_combination_of_known_junctions	FALSE	canonical	1	12460	junction_6	118986.70550209825	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	79	1506	35.0	-1	True	AATAAA	-12
PB.1343.17	chr10	-	3650	13	full-splice_match	ACBD5	ENST00000396271.7	3921	13	-3	274	-3	-271	multi-exon	FALSE	canonical	1	65396	junction_12	70749.2716893707	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	131	1708	35.0	-22	True	AATAAA	-21
PB.1343.14	chr10	-	3920	13	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	-16	-4	combination_of_known_junctions	FALSE	canonical	1	19597	junction_12	81376.80370743795	NA	3	NA	TRUE	NA	NA	NA	C	coding	532	1599	113	1711	30.0	2214	False	AATAAA	-11
PB.1343.15	chr10	-	3655	14	novel_in_catalog	ACBD5	novel	3921	13	NA	NA	16	-270	combination_of_known_junctions	FALSE	canonical	1	19597	junction_13	104186.55140040896	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	81	1712	35.0	-3	True	AATAAA	-22
PB.8576.5	chr3	+	3029	17	novel_not_in_catalog	SENP2	novel	878	7	NA	NA	4	689	any annotated donor/acceptor	FALSE	canonical	1	1461	junction_1	101530.17513525767	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	250	1779	55.0	-7	True	AATAAA	-19
PB.8576.4	chr3	+	3102	17	novel_in_catalog	SENP2	novel	878	7	NA	NA	4	693	combination_of_known_junctions	FALSE	canonical	1	23750	junction_3	98313.88464560524	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	607	1848	45.0	-7	True	AATAAA	-23
PB.1910.3	chr11	+	2817	2	full-splice_match	SLC35C1	ENST00000314134.3	4171	2	1352	2	609	-2	multi-exon	FALSE	canonical	1	180193	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	45	1139	10.0	212	False	AATAAA	-10
PB.9575.2	chr5	+	2095	5	novel_not_in_catalog	GM2A	novel	553	4	NA	NA	233	2318	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	274888.64430210646	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	93	674	45.0	1	True	NA	NA
PB.7564.1	chr21	+	915	6	full-splice_match	FAM207A	ENST00000291634.10	927	6	-6	18	-6	-2	multi-exon	FALSE	canonical	1	574	junction_3	94998.84644268054	NA	1	NA	TRUE	NA	NA	NA	A	coding	230	693	55	747	15.0	-27	True	AATAAA	-40
PB.8576.3	chr3	+	3007	16	novel_in_catalog	SENP2	novel	878	7	NA	NA	-1	691	combination_of_known_junctions	FALSE	canonical	1	13400	junction_11	103054.13291266985	NA	1	NA	TRUE	NA	NA	NA	C	coding	545	1638	118	1755	50.0	-12	True	AATAAA	-21
PB.8576.2	chr3	+	2277	17	full-splice_match	SENP2	ENST00000296257.9	5717	17	49	3391	-18	-245	multi-exon	FALSE	canonical	1	227460	junction_4	70776.27988287174	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	192	1961	10.0	-2	True	NA	NA
PB.8576.9	chr3	+	2640	18	novel_not_in_catalog	SENP2	novel	878	7	NA	NA	13	689	any annotated donor/acceptor	FALSE	canonical	1	5327	junction_17	98722.68812168922	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	104	1873	55.0	2	True	AATAAA	-19
PB.8576.8	chr3	+	3108	17	novel_not_in_catalog	SENP2	novel	878	7	NA	NA	12	691	any annotated donor/acceptor	FALSE	canonical	1	2789	junction_13	101730.76340147111	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	105	1856	50.0	1	True	AATAAA	-21
PB.6290.1	chr2	-	2191	4	full-splice_match	ADI1	ENST00000327435.10	2391	4	199	1	199	-1	multi-exon	FALSE	canonical	1	575355	junction_3	448674.66125195386	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	51	590	30.0	-7	True	NA	NA
PB.4062.2	chr15	-	1912	5	full-splice_match	HAPLN3	ENST00000359595.7	1980	5	67	1	-26	-1	multi-exon	FALSE	canonical	1	91559	junction_4	36400.67071754997	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	149	1231	10.0	-30	True	AATAAA	-30
PB.4062.1	chr15	-	3128	6	full-splice_match	HAPLN3	ENST00000558770.5	3071	6	-51	-6	15	-1	multi-exon	FALSE	canonical	1	9311	junction_3	66318.87344519657	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	172	732	10.0	6655	False	AATAAA	-30
PB.6644.6	chr2	-	2234	10	novel_in_catalog	ACTR1B	novel	2243	11	NA	NA	-85	-9	intron_retention	FALSE	canonical	1	266163	junction_9	189124.2850585656	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	112	921	15.0	-60	True	NA	NA
PB.6644.5	chr2	-	2074	10	novel_in_catalog	ACTR1B	novel	2243	11	NA	NA	88	-5	no_combination_of_known_junctions	FALSE	canonical	1	12215	junction_8	277235.9273840047	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	276	1184	5.0	-78	True	NA	NA
PB.6290.3	chr2	-	1319	4	full-splice_match	ADI1	ENST00000327435.10	2391	4	163	909	163	183	multi-exon	FALSE	canonical	1	575355	junction_3	448674.66125195386	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	87	626	40.0	5	True	AATAAA	-13
PB.6644.3	chr2	-	2149	11	full-splice_match	ACTR1B	ENST00000289228.6	2243	11	45	49	45	-49	multi-exon	FALSE	canonical	1	266163	junction_10	181154.77536968215	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	173	1303	55.0	668	False	NA	NA
PB.10044.8	chr6	+	3736	4	full-splice_match	ZNF451	ENST00000370708.8	9478	4	82	5660	-11	3103	multi-exon	FALSE	canonical	1	63635	junction_3	72220.43661057597	NA	2	NA	TRUE	NA	NA	NA	C	coding	559	1680	97	1776	35.0	-34	True	AATAAA	-23
PB.6644.1	chr2	-	2551	9	novel_in_catalog	ACTR1B	novel	2243	11	NA	NA	53	20	intron_retention	TRUE	canonical	1	266163	junction_8	200353.9004274296	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	165	608	5.0	676	False	NA	NA
PB.5043.3	chr17	-	3319	3	full-splice_match	GJC1	ENST00000586267.1	478	3	-267	-2574	-267	0	multi-exon	FALSE	canonical	1	4233	junction_2	46818.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	536	1726	70.0	1106	False	NA	NA
PB.5043.2	chr17	-	3105	4	novel_not_in_catalog	GJC1	novel	3226	2	NA	NA	-36	-778	intron_retention	TRUE	non_canonical	0	0	junction_1	40782.0791225209	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	303	1493	65.0	19	True	NA	NA
PB.5043.1	chr17	-	3627	4	novel_not_in_catalog	GJC1	novel	3226	2	NA	NA	-17	-1	intron_retention	FALSE	canonical	0	0	junction_1	40782.0791225209	NA	1	1	TRUE	NA	NA	NA	C	coding	396	1191	284	1474	5.0	38	True	AATACA	-14
PB.1155.30	chr1	-	3853	10	incomplete-splice_match	LBR	ENST00000272163.8	3745	14	-25	6371	-25	-1311	3prime_fragment	FALSE	canonical	1	411936	junction_9	149646.51348213237	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	122	1480	50.0	-23	True	AATAAA	-16
PB.5043.6	chr17	-	1885	3	full-splice_match	GJC1	ENST00000592524.5	1837	3	-24	-24	-24	24	multi-exon	FALSE	canonical	1	31603	junction_2	33133.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	291	1481	40.0	31	True	ATTAAA	-18
PB.5043.4	chr17	-	3099	3	full-splice_match	GJC1	ENST00000591424.5	586	3	-40	-2473	-40	0	multi-exon	FALSE	canonical	1	12835	junction_2	42517.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	316	1506	70.0	211	False	NA	NA
PB.6234.2	chr19	+	3497	1	genic	ZNF264	novel	NA	NA	NA	NA	-28	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	2	True	AATAAA	-39
PB.10766.11	chr7	-	1948	7	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	2	-8	intron_retention	FALSE	canonical	1	488	junction_3	15934.522521870556	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-7	True	AATAAA	-10
PB.10766.12	chr7	-	4592	2	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	21701	-7196	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	99	300	1520	1819	85.0	5056	False	AAGAAA	-39
PB.6234.1	chr19	+	4270	4	full-splice_match	ZNF264	ENST00000263095.10	12163	4	-30	7923	-30	1804	multi-exon	FALSE	canonical	1	73327	junction_2	9081.359161613542	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	445	2328	30.0	0	True	NA	NA
PB.10766.14	chr7	-	5310	3	incomplete-splice_match	LHFPL3-AS1	ENST00000411448.5	856	4	-11	26358	-9	1479	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1	True	AATAAA	-9
PB.10766.15	chr7	-	3793	3	full-splice_match	LHFPL3-AS1	ENST00000450896.1	890	3	-18	-2885	-18	-2	multi-exon	FALSE	canonical	1	370	junction_2	21593.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-2	True	AATAAA	-17
PB.10766.16	chr7	-	3853	3	incomplete-splice_match	LHFPL3-AS1	ENST00000411448.5	856	4	-36	27840	-15	-3	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-24	True	AATAAA	-16
PB.10766.17	chr7	-	2443	4	incomplete-splice_match	LHFPL3-AS1	ENST00000416376.6	866	7	-15	11297	-15	-3	3prime_fragment	FALSE	canonical	1	4217	junction_1	16086.988973149148	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-24	True	AATAAA	-16
PB.8548.3	chr3	+	4050	2	full-splice_match	B3GNT5	ENST00000460419.1	3368	2	282	-964	282	-1	multi-exon	FALSE	canonical	1	19179	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	585	1595	30.0	-22	True	AATAAA	-20
PB.6908.1	chr2	-	4131	2	novel_in_catalog	AC006460.2	novel	4744	6	NA	NA	-26	1735	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	54	165	198	362	25.0	-28	False	NA	NA
PB.1135.1	chr1	+	2048	4	full-splice_match	HLX	ENST00000366903.7	2280	4	228	4	197	-1	multi-exon	FALSE	canonical	1	79692	junction_1	29134.40711598573	NA	0	NA	TRUE	NA	NA	NA	A	coding	488	1467	231	1697	15.0	-1961	False	AATAAA	-18
PB.216.1	chr1	+	2527	7	full-splice_match	PPP1R8	ENST00000373931.8	2651	7	-21	145	-13	-1	multi-exon	FALSE	canonical	1	5215	junction_1	128451.00670737808	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	817	1446	20.0	-13	True	ATTAAA	-14
PB.5509.1	chr18	-	2301	10	full-splice_match	KDSR	ENST00000645214.2	5143	10	-26	2868	-4	231	multi-exon	FALSE	canonical	1	266114	junction_9	77703.8658227663	NA	5	NA	TRUE	NA	NA	NA	C	coding	332	999	115	1113	15.0	-3	True	AATAAA	-14
PB.5509.2	chr18	-	2050	10	full-splice_match	KDSR	ENST00000645214.2	5143	10	-6	3099	-6	0	multi-exon	FALSE	canonical	1	266114	junction_9	77703.8658227663	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	95	1093	90.0	-7	True	NA	NA
PB.5509.3	chr18	-	1939	9	full-splice_match	KDSR	ENST00000591902.6	1378	9	-3	-558	0	0	multi-exon	FALSE	canonical	1	15973	junction_1	158369.2748155695	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	86	982	90.0	2	True	NA	NA
PB.1124.1	chr1	+	4695	4	novel_not_in_catalog	SPATA17	novel	847	8	NA	NA	22	-117750	any annotated donor/acceptor	FALSE	canonical	1	2080	junction_3	9235.389795058283	NA	6	NA	TRUE	NA	NA	NA	A	coding	183	552	34	585	30.0	-7	True	NA	NA
PB.394.1	chr1	+	2808	6	full-splice_match	CMPK1	ENST00000371873.9	2930	6	121	1	4	-1	multi-exon	FALSE	canonical	1	867118	junction_1	372307.9828686997	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	29	715	15.0	4	True	AATAAA	-22
PB.6246.1	chr19	+	2561	4	full-splice_match	ZNF773	ENST00000598770.5	2019	4	-40	-502	-20	312	multi-exon	FALSE	canonical	1	107	junction_2	15638.24110598404	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	187	1512	20.0	-43	True	NA	NA
PB.4149.9	chr16	-	4923	24	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	2	0	intron_retention	FALSE	canonical	1	196883	junction_23	131666.83244258267	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	50	1708	10.0	1	True	AATAAA	-12
PB.4149.8	chr16	-	4778	24	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	19	3	intron_retention	FALSE	canonical	1	196883	junction_23	133009.5738367663	NA	9	NA	TRUE	NA	NA	NA	C	coding	474	1425	33	1457	5.0	-1	True	AATAAA	-15
PB.4149.3	chr16	-	6935	22	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	7	7	intron_retention	FALSE	canonical	1	196883	junction_21	134794.753660196	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	77	1294	5.0	-26	True	AATAAA	-19
PB.4149.2	chr16	-	3725	25	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	180	8	intron_retention	FALSE	canonical	1	10305	junction_24	153257.1256434244	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	187	2430	5.0	-25	True	AATAAA	-20
PB.4149.1	chr16	-	4186	25	full-splice_match	CLCN7	ENST00000382745.8	4720	25	535	-1	12	0	multi-exon	FALSE	canonical	1	196883	junction_24	132199.0820216739	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	72	2489	5.0	-21	True	NA	NA
PB.7808.1	chr22	+	1467	3	novel_not_in_catalog	XPNPEP3	novel	582	3	NA	NA	-24	1	any annotated donor/acceptor	FALSE	canonical	1	8651	junction_1	17038.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	9	30	372	401	35.0	-5199	False	ATTAAA	-26
PB.7808.6	chr22	+	4040	11	novel_not_in_catalog	XPNPEP3	novel	582	3	NA	NA	4	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	26530.987343293502	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	81	1604	80.0	4	True	NA	NA
PB.4149.6	chr16	-	5970	23	novel_in_catalog	CLCN7	novel	4184	9	NA	NA	-3	4	intron_retention	FALSE	canonical	1	196883	junction_22	132241.57898585257	NA	3	NA	TRUE	NA	NA	NA	C	coding	474	1425	55	1479	5.0	-4	True	AATAAA	-16
PB.4149.5	chr16	-	3471	26	novel_not_in_catalog	CLCN7	novel	4184	9	NA	NA	12	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	161716.255352471	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	72	2489	5.0	-21	True	AATAAA	-16
PB.4149.4	chr16	-	3774	25	full-splice_match	CLCN7	ENST00000382745.8	4720	25	544	402	-11	7	multi-exon	FALSE	canonical	1	196883	junction_24	132199.0820216739	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	63	2480	5.0	-12	True	AATAAA	-19
PB.2606.5	chr12	+	4477	17	novel_in_catalog	LARP4	novel	567	4	NA	NA	5	451	intron_retention	FALSE	canonical	1	56771	junction_2	75630.94352842624	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	409	2373	45.0	-33	True	AATAAA	-9
PB.2606.4	chr12	+	2447	15	full-splice_match	LARP4	ENST00000347328.9	3621	15	-128	1302	0	233	multi-exon	FALSE	canonical	1	29538	junction_8	74909.90427445601	NA	11	2	TRUE	NA	NA	NA	C	coding	653	1962	155	2116	75.0	-38	True	NA	NA
PB.2606.7	chr12	+	2257	16	novel_in_catalog	LARP4	novel	567	4	NA	NA	10	-100	intron_retention	FALSE	canonical	1	6239	junction_15	78329.77465124967	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2112	145	2256	65.0	-28	True	NA	NA
PB.3102.2	chr13	+	2300	9	full-splice_match	RFC3	ENST00000380071.7	2402	9	105	-3	85	3	multi-exon	FALSE	canonical	1	224763	junction_2	76818.28728686614	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	26	1096	15.0	5	True	NA	NA
PB.3102.5	chr13	+	2209	8	novel_not_in_catalog	RFC3	novel	2402	9	NA	NA	95	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	137136.98313566265	NA	1	1	TRUE	NA	NA	NA	C	coding	329	990	16	1005	15.0	15	True	NA	NA
PB.3102.4	chr13	+	1389	9	full-splice_match	RFC3	ENST00000434425.5	1461	9	73	-1	73	1	multi-exon	FALSE	canonical	1	9931	junction_8	138221.3708645935	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	38	955	5.0	-7	True	AATAAA	-28
PB.2606.3	chr12	+	4455	16	full-splice_match	LARP4	ENST00000429001.7	4000	16	-4	-451	-4	451	multi-exon	TRUE	canonical	1	20741	junction_2	78205.52939973831	NA	2	NA	TRUE	NA	NA	NA	C	coding	730	2193	159	2351	45.0	-42	True	AATAAA	-9
PB.2606.2	chr12	+	4164	15	full-splice_match	LARP4	ENST00000347328.9	3621	15	-72	-471	5	451	multi-exon	FALSE	canonical	1	29538	junction_8	74909.90427445601	NA	2	NA	TRUE	NA	NA	NA	C	coding	653	1962	99	2060	45.0	18	True	AATAAA	-9
PB.11290.6	chr8	-	2523	7	full-splice_match	SLC25A32	ENST00000297578.8	2891	7	-52	420	15	-420	multi-exon	FALSE	canonical	1	266335	junction_5	58812.23729708715	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	220	1167	35.0	-50	True	TATAAA	-30
PB.2606.9	chr12	+	6332	16	full-splice_match	LARP4	ENST00000398473.6	6427	16	69	26	12	-18	multi-exon	FALSE	canonical	1	59143	junction_3	68666.57951237187	NA	2	NA	TRUE	NA	NA	NA	C	coding	724	2175	44	2218	75.0	4	True	NA	NA
PB.2606.8	chr12	+	6472	17	novel_in_catalog	LARP4	novel	567	4	NA	NA	-12	-18	intron_retention	FALSE	canonical	1	56771	junction_2	75630.94352842624	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	394	2358	75.0	-18	True	NA	NA
PB.394.9	chr1	+	2311	3	incomplete-splice_match	CMPK1	ENST00000371873.9	2930	6	41110	1	40966	-1	5prime_fragment	FALSE	canonical	1	1414585	junction_1	7424.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-5373	False	AATAAA	-22
PB.886.10	chr1	+	3412	2	novel_not_in_catalog	UHMK1	novel	8117	8	NA	NA	-13	-20443	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	126	381	172	552	100.0	-16	True	NA	NA
PB.5053.1	chr17	+	2411	6	novel_not_in_catalog	MAP3K14-AS1	novel	454	4	NA	NA	-21	1208	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	6915.639070975292	NA	11	1	TRUE	NA	NA	NA	C	coding	120	363	1	363	15.0	-7123	False	NA	NA
PB.5053.2	chr17	+	2204	4	full-splice_match	MAP3K14-AS1	ENST00000588698.5	460	4	-35	-1709	5	1208	multi-exon	TRUE	canonical	1	18671	junction_2	2872.157648102826	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	NA	NA
PB.9078.4	chr4	-	1964	8	novel_in_catalog	AGA	novel	2107	9	NA	NA	-34	-7	combination_of_known_junctions	FALSE	canonical	1	6788	junction_3	103105.88638850443	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	69	698	35.0	-7	True	AATAAA	-19
PB.8895.15	chr4	-	2639	4	novel_in_catalog	DNAJB14	novel	6075	8	NA	NA	-3	-802	combination_of_known_junctions	FALSE	canonical	1	16048	junction_1	63887.92953463293	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	13	378	15.0	34	True	NA	NA
PB.8895.14	chr4	-	2852	4	novel_in_catalog	DNAJB14	novel	6075	8	NA	NA	-37	-638	combination_of_known_junctions	FALSE	canonical	1	16048	junction_1	63887.92953463293	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	62	427	35.0	0	True	NA	NA
PB.18.18	chr1	-	4122	11	novel_not_in_catalog	CCNL2	novel	2792	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	17735	junction_9	447462.2514084177	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	2703	3599	45.0	-15	True	AATAAA	-20
PB.8895.16	chr4	-	1995	1	novel_in_catalog	DNAJB14	novel	6075	8	NA	NA	0	-19801	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	31	True	NA	NA
PB.8895.11	chr4	-	2377	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	133	3565	2	-417	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	23	1162	70.0	24	True	AGTAAA	-18
PB.8895.10	chr4	-	2660	8	full-splice_match	DNAJB14	ENST00000442697.6	6075	8	115	3300	-16	-152	multi-exon	FALSE	canonical	1	6082	junction_5	72377.96737535363	NA	9	NA	TRUE	NA	NA	NA	C	coding	379	1140	41	1180	30.0	6	True	AATAAA	-19
PB.8895.13	chr4	-	2128	4	incomplete-splice_match	DNAJB14	ENST00000426476.5	662	5	-99	12776	-62	1015	3prime_fragment	FALSE	canonical	1	9085	junction_1	67761.16311641122	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	87	416	35.0	-5	True	ATTAAA	-18
PB.8895.12	chr4	-	2195	7	full-splice_match	DNAJB14	ENST00000334223.6	2617	7	5	417	-3	-417	multi-exon	FALSE	canonical	1	2996	junction_6	61135.50011631721	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	42	980	70.0	34	True	AGTAAA	-18
PB.11089.8	chr8	+	2429	16	full-splice_match	ASH2L	ENST00000343823.10	3090	16	291	370	-17	72	multi-exon	FALSE	canonical	1	295807	junction_1	85541.59483900215	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	19	1905	40.0	4	True	AATACA	-12
PB.1121.8	chr1	+	2938	12	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	19	23461	19	-12366	3prime_fragment	FALSE	canonical	1	223700	junction_1	42678.949479740186	NA	1	NA	TRUE	NA	NA	NA	C	coding	929	2787	150	2936	55.0	9	True	TTTAAA	-40
PB.1121.9	chr1	+	3246	12	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	43	23129	43	-12034	3prime_fragment	FALSE	canonical	1	223700	junction_1	42678.949479740186	NA	0	NA	TRUE	NA	NA	NA	C	coding	1040	3120	126	3245	60.0	0	True	AAGAAA	-28
PB.9026.1	chr4	-	2226	13	full-splice_match	GATB	ENST00000263985.10	2385	13	12	147	-12	-147	multi-exon	FALSE	canonical	1	187721	junction_12	33905.87871952378	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	30	1703	15.0	-5	True	AATAAA	-21
PB.1121.2	chr1	+	7409	13	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	14	17763	14	-6668	3prime_fragment	FALSE	canonical	1	223700	junction_1	41938.66565858077	NA	36	NA	TRUE	NA	NA	NA	C	coding	2418	7254	155	7408	60.0	4	True	AATAAA	-12
PB.1121.3	chr1	+	1324	8	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	0	35455	0	13943	3prime_fragment	FALSE	canonical	1	223700	junction_1	45701.18371351367	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1155	169	1323	70.0	-10	True	NA	NA
PB.381.7	chr1	-	2977	9	novel_not_in_catalog	IPP	novel	1947	10	NA	NA	-2	-27	any annotated donor/acceptor	FALSE	canonical	1	12862	junction_2	30797.77301100682	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	107	1504	95.0	-4	True	NA	NA
PB.1121.6	chr1	+	6814	13	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	1	18371	1	-7276	3prime_fragment	FALSE	canonical	1	223700	junction_1	41938.66565858077	NA	4	NA	TRUE	NA	NA	NA	C	coding	2215	6645	168	6812	75.0	-9	True	AAAAAG	-11
PB.1121.7	chr1	+	3561	12	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	11	22846	11	-11751	3prime_fragment	FALSE	canonical	1	223700	junction_1	42678.949479740186	NA	0	NA	TRUE	NA	NA	NA	C	coding	1134	3402	158	3559	75.0	1	True	AAGAAA	-11
PB.1121.4	chr1	+	2745	12	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	0	23673	0	-12578	3prime_fragment	FALSE	canonical	1	223700	junction_1	42678.949479740186	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2577	169	2745	70.0	-10	True	NA	NA
PB.1121.5	chr1	+	1969	12	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	10	24439	10	-13344	3prime_fragment	FALSE	canonical	1	223700	junction_1	42678.949479740186	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1809	159	1967	70.0	0	True	NA	NA
PB.11621.3	chr9	-	4088	11	full-splice_match	UBQLN1	ENST00000376395.8	4118	11	24	6	24	2	multi-exon	FALSE	canonical	1	863295	junction_9	174628.50651279703	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	501	2270	10.0	64	False	AATAAA	-15
PB.6477.19	chr2	-	2527	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	8	381	no_combination_of_known_junctions	FALSE	canonical	1	9686	junction_5	73152.8556637729	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	12	2279	45.0	0	True	ATTAAA	-24
PB.6477.18	chr2	-	2640	28	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	2	381	any annotated donor/acceptor	FALSE	canonical	1	58	junction_1	74578.07036363463	NA	28	5	TRUE	NA	NA	NA	C	coding	737	2214	18	2231	45.0	-6	True	ATTAAA	-24
PB.11290.4	chr8	-	2839	6	full-splice_match	SLC25A32	ENST00000523866.1	1347	6	-73	-1419	29	-4	multi-exon	FALSE	canonical	1	18036	junction_4	145565.1516972383	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	516	1067	35.0	-36	True	NA	NA
PB.11621.2	chr9	-	3799	10	full-splice_match	UBQLN1	ENST00000257468.11	2299	10	-35	-1465	-35	-1	multi-exon	FALSE	canonical	1	190469	junction_3	343206.3244114246	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	291	1976	5.0	-26	True	AATAAA	-20
PB.6477.13	chr2	-	3133	26	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	7	-238	combination_of_known_junctions	FALSE	canonical	1	4237	junction_25	73910.58062334513	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	501	2228	80.0	-1	True	NA	NA
PB.6477.12	chr2	-	3187	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	5	-238	no_combination_of_known_junctions	FALSE	canonical	1	9686	junction_5	73152.8556637729	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	15	2282	80.0	-3	True	NA	NA
PB.6477.11	chr2	-	3278	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	66	1067	-2	-238	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	22	2373	80.0	-10	True	NA	NA
PB.6477.10	chr2	-	3426	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	69	916	1	-87	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	19	2370	30.0	-7	True	AATAGA	-29
PB.6477.17	chr2	-	3476	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	10	381	intron_retention	FALSE	canonical	1	59518	junction_19	61406.879526125536	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	1750	3228	45.0	-19	True	ATTAAA	-24
PB.6477.16	chr2	-	2614	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	70	1727	2	378	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	18	2369	50.0	-6	True	ATTAAA	-21
PB.6477.15	chr2	-	2983	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	67	1361	-1	-532	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	21	2372	35.0	-9	True	AATAAA	-23
PB.8638.9	chr3	+	3098	22	novel_not_in_catalog	LRCH3	novel	611	4	NA	NA	-8	1527	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	58231.72186392993	NA	2	NA	TRUE	NA	NA	NA	C	coding	777	2334	24	2357	10.0	-4	True	AATAAA	-13
PB.7790.2	chr22	+	2900	1	intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-10	True	NA	NA
PB.4078.13	chr15	+	6029	28	incomplete-splice_match	IQGAP1	ENST00000268182.9	7233	38	61338	6	-17926	-1	5prime_fragment	FALSE	canonical	1	634527	junction_1	267054.4749975648	NA	2	NA	TRUE	NA	NA	NA	C	coding	1246	3741	160	3900	10.0	-3229	False	AATAAA	-13
PB.4078.14	chr15	+	3066	23	incomplete-splice_match	IQGAP1	ENST00000268182.9	7233	38	66305	7511	-12959	-36	internal_fragment	FALSE	canonical	1	748987	junction_5	265136.63933302375	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2496	570	3065	65.0	1738	False	AAAAAG	-8
PB.4078.15	chr15	+	5619	25	incomplete-splice_match	IQGAP1	ENST00000268182.9	7233	38	66208	5	-13056	0	5prime_fragment	FALSE	canonical	1	748987	junction_5	256866.5482768261	NA	1	NA	TRUE	NA	NA	NA	C	coding	1156	3471	19	3489	10.0	1641	False	AATAAA	-14
PB.12257.1	chrX	+	5094	22	novel_in_catalog	OCRL	novel	942	8	NA	NA	-56	-10	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	72890.26102657022	NA	2	NA	TRUE	NA	NA	NA	C	coding	863	2592	222	2813	45.0	-113	False	AATAAA	-14
PB.12257.3	chrX	+	4948	23	full-splice_match	OCRL	ENST00000357121.5	5138	23	180	10	180	-10	multi-exon	FALSE	non_canonical	0	0	junction_1	62475.86249595628	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	37	2667	45.0	123	False	AATAAA	-14
PB.12257.2	chrX	+	5189	24	full-splice_match	OCRL	ENST00000371113.8	5162	24	-37	10	-37	-10	multi-exon	TRUE	non_canonical	0	0	junction_1	73299.67609720136	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	203	2908	45.0	-33	True	AATAAA	-14
PB.11621.5	chr9	-	3211	8	novel_in_catalog	UBQLN1	novel	4118	11	NA	NA	-20	-1	no_combination_of_known_junctions	FALSE	canonical	1	3522	junction_5	446560.3988970608	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	276	1388	5.0	-11	True	AATAAA	-20
PB.1404.10	chr10	-	3269	5	incomplete-splice_match	ERCC6	ENST00000447839.6	3411	6	-30	7083	-30	2652	3prime_fragment	FALSE	canonical	1	71025	junction_4	18243.967227209658	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	124	1569	25.0	50	False	AATAAA	-24
PB.3616.11	chr14	-	2285	13	full-splice_match	RPS6KA5	ENST00000418736.6	2249	13	-31	-5	5	5	multi-exon	FALSE	canonical	1	48957	junction_12	14386.428022377742	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	198	1847	30.0	4	True	AATAAA	-29
PB.3616.10	chr14	-	2688	16	incomplete-splice_match	RPS6KA5	ENST00000614987.4	26795	17	-32	25448	-4	-1236	3prime_fragment	FALSE	canonical	1	48957	junction_15	13301.353492366441	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	207	2474	40.0	-5	True	AATAAA	-12
PB.3616.12	chr14	-	3832	7	incomplete-splice_match	RPS6KA5	ENST00000418736.6	2249	13	-78	23450	-42	-11232	3prime_fragment	FALSE	canonical	1	48957	junction_6	11648.244337190428	NA	4	NA	TRUE	NA	NA	NA	C	coding	269	810	245	1054	70.0	6	True	NA	NA
PB.6465.6	chr2	+	2289	15	novel_not_in_catalog	ERLEC1	novel	485	3	NA	NA	-17	-18	any annotated donor/acceptor	FALSE	canonical	1	14	junction_1	226795.26730431954	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	210	1457	30.0	19	True	AATAAA	-19
PB.6465.4	chr2	+	1913	14	full-splice_match	ERLEC1	ENST00000185150.8	2433	14	-35	555	1	44	multi-exon	FALSE	canonical	1	433888	junction_8	151046.7581729061	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	167	1618	40.0	1	True	AATAAA	-29
PB.6465.5	chr2	+	1729	13	full-splice_match	ERLEC1	ENST00000378239.5	2271	13	-20	562	16	37	multi-exon	FALSE	canonical	1	111564	junction_8	213444.07083412522	NA	12	2	TRUE	NA	NA	NA	C	coding	429	1290	152	1441	35.0	16	True	AATAAA	-22
PB.6465.2	chr2	+	2297	13	full-splice_match	ERLEC1	ENST00000378239.5	2271	13	-37	11	-1	-11	multi-exon	FALSE	canonical	1	111564	junction_8	213444.07083412522	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	373	1458	40.0	-1	True	AATAAA	-26
PB.6465.3	chr2	+	1803	14	full-splice_match	ERLEC1	ENST00000185150.8	2433	14	-36	666	0	-67	multi-exon	FALSE	canonical	1	433888	junction_8	151046.7581729061	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	168	1619	10.0	0	True	GATAAA	-15
PB.6465.1	chr2	+	2441	14	full-splice_match	ERLEC1	ENST00000185150.8	2433	14	-19	11	17	-11	multi-exon	FALSE	canonical	1	433888	junction_8	151046.7581729061	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	355	1602	40.0	17	True	AATAAA	-26
PB.4640.9	chr17	-	3402	9	novel_in_catalog	GLOD4	novel	276	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	736	junction_7	372761.73980789573	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	1954	2682	60.0	0	True	ATTAAA	-16
PB.4640.8	chr17	-	1768	10	novel_in_catalog	GLOD4	novel	276	2	NA	NA	-1	0	intron_retention	FALSE	canonical	1	736	junction_8	401525.2970249666	NA	4	1	TRUE	NA	NA	NA	C	coding	289	870	178	1047	60.0	2	True	ATTAAA	-17
PB.3546.2	chr14	-	2558	2	intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	351	1056	764	1819	5.0	4715	False	ATTAAA	-16
PB.4640.5	chr17	-	1605	9	novel_not_in_catalog	GLOD4	novel	276	2	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_7	289240.92118009407	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	60	884	60.0	10	False	ATTAAA	-17
PB.4640.4	chr17	-	1771	9	full-splice_match	GLOD4	ENST00000301329.10	2059	9	61	227	0	-1	multi-exon	FALSE	canonical	1	598540	junction_8	124560.19777676776	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	26	922	40.0	-1	True	AATAAA	-23
PB.4640.7	chr17	-	1653	9	full-splice_match	GLOD4	ENST00000301329.10	2059	9	51	355	1	0	multi-exon	FALSE	canonical	1	598540	junction_8	124560.19777676776	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	36	932	60.0	-11	True	ATTAAA	-17
PB.1406.13	chr10	-	3999	16	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	0	-113	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	101850.69438414906	NA	1	NA	TRUE	NA	NA	NA	B	coding	929	2790	262	3051	40.0	NA	False	AATAAA	-11
PB.4640.1	chr17	-	2730	9	full-splice_match	GLOD4	ENST00000301329.10	2059	9	48	-719	1	719	multi-exon	FALSE	canonical	1	598540	junction_8	124560.19777676776	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	39	935	15.0	-14	True	ACTAAA	-22
PB.1406.15	chr10	-	2625	10	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	2	-3856	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	75597.73651520409	NA	0	NA	TRUE	NA	NA	NA	B	coding	697	2094	259	2352	35.0	NA	False	AATAAA	-24
PB.4640.3	chr17	-	1850	9	novel_in_catalog	GLOD4	novel	276	2	NA	NA	0	5	intron_retention	FALSE	canonical	1	18037	junction_7	283712.96257254004	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	126	995	25.0	-1	True	AATAAA	-29
PB.4640.2	chr17	-	3488	8	novel_in_catalog	GLOD4	novel	276	2	NA	NA	0	-2	intron_retention	FALSE	canonical	1	598540	junction_7	115081.96558566952	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	1899	2627	25.0	0	True	AATAAA	-35
PB.7138.2	chr20	+	3243	9	novel_in_catalog	NOP56	novel	2400	12	NA	NA	-34	-3	intron_retention	FALSE	canonical	1	1017501	junction_1	651020.7269380906	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	64	1083	20.0	6	True	AATAAA	-12
PB.7138.3	chr20	+	2111	12	novel_in_catalog	NOP56	novel	2400	12	NA	NA	-14	4	combination_of_known_junctions	FALSE	canonical	1	859389	junction_8	694709.66487277	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	44	1063	20.0	-5103	False	AATAAA	-20
PB.5239.1	chr17	-	921	5	full-splice_match	NT5C	ENST00000245552.6	954	5	35	-2	-3	-1	multi-exon	FALSE	canonical	1	389011	junction_4	177614.38708952465	NA	0	NA	TRUE	NA	NA	NA	A	coding	201	606	54	659	15.0	-19	True	AATAAA	-19
PB.7138.6	chr20	+	3394	8	incomplete-splice_match	NOP56	ENST00000329276.9	2400	12	487	4	0	-3	intron_retention	FALSE	canonical	1	1017501	junction_1	353225.60187904886	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	30	1049	20.0	0	True	AATAAA	-12
PB.7138.7	chr20	+	3092	11	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	13	intron_retention	FALSE	canonical	1	859389	junction_7	715454.1149484292	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	1548	2069	65.0	0	True	NA	NA
PB.7138.4	chr20	+	1466	12	full-splice_match	NOP56	ENST00000329276.9	2400	12	487	447	0	-413	multi-exon	FALSE	canonical	1	1017501	junction_1	658398.7177828109	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1437	30	1466	80.0	0	True	NA	NA
PB.7138.5	chr20	+	4666	5	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	13	intron_retention	FALSE	canonical	1	1017501	junction_1	389849.68476677005	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	4226	4588	65.0	0	True	NA	NA
PB.8397.34	chr3	+	3910	30	novel_not_in_catalog	ATP2C1	novel	4888	27	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	10464	junction_12	309208.9257708321	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	1434	3449	25.0	37	True	ATTAAA	-30
PB.8397.35	chr3	+	3489	29	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	32044	junction_1	257816.54273275088	NA	15	3	TRUE	NA	NA	NA	C	coding	949	2850	203	3052	5.0	-7	True	ATTAAA	-6
PB.7138.8	chr20	+	3023	10	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	859389	junction_8	669382.8849249467	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	30	1049	20.0	0	True	AATAAA	-12
PB.7138.9	chr20	+	2985	10	novel_in_catalog	NOP56	novel	2400	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1017501	junction_1	672665.5129696269	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	30	1049	20.0	0	True	AATAAA	-12
PB.8397.30	chr3	+	3740	27	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	3	659	combination_of_known_junctions	FALSE	canonical	1	29520	junction_18	279286.7513431185	NA	34	3	TRUE	NA	NA	NA	C	coding	862	2589	501	3089	25.0	35	True	AGTAAA	-24
PB.8397.31	chr3	+	3595	28	full-splice_match	ATP2C1	ENST00000513801.5	3439	28	-160	4	3	-1	multi-exon	FALSE	canonical	1	53219	junction_1	256327.74568511103	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	363	3134	25.0	35	True	ATTAAA	-30
PB.8397.32	chr3	+	3423	28	full-splice_match	ATP2C1	ENST00000508532.5	4969	28	172	1374	-15	434	multi-exon	FALSE	canonical	1	32044	junction_1	242080.2703752739	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	238	2997	25.0	-42	True	AATACA	-27
PB.8397.33	chr3	+	4078	27	full-splice_match	ATP2C1	ENST00000504948.5	4714	27	-158	794	5	-751	multi-exon	FALSE	canonical	1	53219	junction_1	228071.19362707945	NA	2	NA	TRUE	NA	NA	NA	C	coding	903	2712	361	3072	45.0	37	True	AATAAA	-16
PB.11026.6	chr8	-	1716	10	novel_in_catalog	BIN3	novel	1835	9	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	9705	junction_2	136508.14343021967	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	89	775	30.0	-19	True	AGTAAA	-18
PB.11026.7	chr8	-	1559	9	novel_not_in_catalog	BIN3	novel	1835	9	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	207	junction_6	114252.10513261615	NA	3	1	TRUE	NA	NA	NA	C	coding	173	522	330	851	25.0	-1	True	AGTAAA	-17
PB.3595.1	chr14	+	2124	10	novel_in_catalog	ADCK1	novel	2234	11	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	6655	junction_6	28503.688936480736	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	110	1564	30.0	0	True	AATAAA	-16
PB.3595.3	chr14	+	2373	13	novel_not_in_catalog	ADCK1	novel	2234	11	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	49	junction_4	35309.52288010748	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	621	1814	25.0	19	True	AATAAA	-15
PB.3595.2	chr14	+	2243	11	full-splice_match	ADCK1	ENST00000238561.9	2234	11	-10	1	-10	1	multi-exon	FALSE	canonical	1	51466	junction_1	19055.913734061665	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	110	1681	30.0	0	True	AATAAA	-18
PB.11026.4	chr8	-	7140	8	novel_in_catalog	BIN3	novel	1835	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	279654	junction_1	36791.69554590896	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	6036	6431	30.0	0	True	AGTAAA	-18
PB.271.2	chr1	-	3993	15	novel_in_catalog	PHC2	novel	3789	13	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	1	10091	junction_9	431714.51365849137	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	175	2754	0.0	-1	True	AATAAA	-14
PB.1491.2	chr10	+	5275	3	full-splice_match	RPS24	ENST00000466129.6	1104	3	1	-4172	1	0	multi-exon	FALSE	canonical	1	19921163	junction_1	4463676.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	16	360	20.0	-6739	False	AATAAA	-17
PB.1395.14	chr10	+	3040	15	incomplete-splice_match	WASHC2C	ENST00000623400.3	4616	31	32047	-22	19120	-3	5prime_fragment	FALSE	canonical	1	1507	junction_13	98709.99653398736	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	887	2482	25.0	NA	False	NA	NA
PB.5939.3	chr19	-	2339	12	novel_in_catalog	NFKBID	novel	1552	6	NA	NA	5	-21	combination_of_known_junctions	FALSE	canonical	1	13784	junction_8	31642.624414200884	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	468	1454	100.0	-4	True	NA	NA
PB.1491.1	chr10	+	3800	4	full-splice_match	RPS24	ENST00000478655.6	1008	4	24	-2816	1	2	multi-exon	FALSE	canonical	1	4700879	junction_3	9969191.705287924	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	16	411	15.0	-6739	False	AATAAA	-15
PB.5939.5	chr19	-	2307	9	novel_in_catalog	NFKBID	novel	1552	6	NA	NA	5	288	intron_retention	FALSE	canonical	1	47405	junction_8	24257.141262613262	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	1186	1701	10.0	-4	True	ATTAAA	-16
PB.1395.10	chr10	+	3693	29	incomplete-splice_match	WASHC2C	ENST00000623400.3	4616	31	3	3511	3	-3176	3prime_fragment	FALSE	canonical	1	872	junction_5	112135.87922932801	NA	7	2	TRUE	NA	NA	NA	C	coding	1214	3642	52	3693	60.0	1	True	NA	NA
PB.5939.7	chr19	-	2893	8	novel_in_catalog	NFKBID	novel	1552	6	NA	NA	-7	286	intron_retention	FALSE	canonical	1	47405	junction_7	25847.226422080294	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	1774	2289	15.0	0	True	ATTAAA	-14
PB.5939.6	chr19	-	2015	12	full-splice_match	NFKBID	ENST00000641389.1	1834	12	107	-288	5	288	multi-exon	FALSE	canonical	1	47405	junction_11	21515.918939663763	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	468	1409	10.0	-4	True	ATTAAA	-16
PB.5939.8	chr19	-	2221	10	novel_in_catalog	NFKBID	novel	1552	6	NA	NA	8	286	intron_retention	FALSE	canonical	1	47405	junction_9	23420.324634812387	NA	5	2	TRUE	NA	NA	NA	C	coding	234	705	465	1169	15.0	-1	True	ATTAAA	-14
PB.9424.4	chr5	+	7601	26	full-splice_match	MEGF10	ENST00000274473.6	7594	26	-16	9	-3	-9	multi-exon	FALSE	canonical	1	7246	junction_2	7480.874897069192	NA	1	NA	TRUE	NA	NA	NA	C	coding	1140	3423	284	3706	45.0	-1	True	AATAAA	-7
PB.9424.5	chr5	+	4955	25	full-splice_match	MEGF10	ENST00000503335.6	7571	25	13	2603	-2	-2603	multi-exon	FALSE	canonical	1	14386	junction_5	6017.064455917575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1140	3423	232	3654	45.0	0	True	AATATA	-16
PB.9424.2	chr5	+	4935	26	full-splice_match	MEGF10	ENST00000274473.6	7594	26	-43	2702	-15	-2702	multi-exon	FALSE	canonical	1	7246	junction_2	7480.874897069192	NA	0	NA	TRUE	NA	NA	NA	C	coding	1140	3423	311	3733	20.0	-28	True	AATGAA	-20
PB.9424.3	chr5	+	3982	14	full-splice_match	MEGF10	ENST00000508365.5	2365	14	-13	-1604	2	1604	multi-exon	FALSE	canonical	1	1077	junction_13	6808.140166059307	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	243	1946	50.0	-11	True	AATAAA	-32
PB.5367.3	chr18	+	851	4	full-splice_match	MYL12A	ENST00000217652.7	1229	4	269	109	-2	1	multi-exon	FALSE	canonical	1	3844037	junction_3	1428539.4047088795	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	127	642	25.0	-55	True	AATAAA	-22
PB.7451.1	chr21	+	2873	2	intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.7451.2	chr21	+	2211	2	intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.5367.1	chr18	+	2106	1	full-splice_match	MYL12A	ENST00000608786.1	738	1	-116	-1252	-10	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-63	True	NA	NA
PB.8874.24	chr4	-	3929	2	novel_in_catalog	PPM1K	novel	6484	7	NA	NA	12	-4	intron_retention	FALSE	canonical	1	105597	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	150	453	274	726	15.0	-1	True	ATTAAA	-34
PB.11621.12	chr9	-	2913	11	novel_in_catalog	UBQLN1	novel	4118	11	NA	NA	-17	552	combination_of_known_junctions	FALSE	canonical	1	6612	junction_4	382085.92440371314	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	273	2003	30.0	-8	True	ATTAAA	-29
PB.6771.4	chr2	+	6021	8	incomplete-splice_match	MBD5	ENST00000638043.2	7019	14	-409	41881	70	-3	3prime_fragment	FALSE	canonical	1	45889	junction_5	11237.00858406575	NA	1	NA	TRUE	NA	NA	NA	B	coding	851	2556	1513	4068	20.0	2	True	AATAAA	-20
PB.6771.2	chr2	+	4749	9	novel_in_catalog	MBD5	novel	548	4	NA	NA	64	-1340	combination_of_known_junctions	FALSE	canonical	1	22320	junction_1	19613.023705165273	NA	0	NA	TRUE	NA	NA	NA	B	coding	851	2556	1578	4133	30.0	-4	True	AATAAA	-20
PB.6771.3	chr2	+	4122	1	novel_in_catalog	MBD5	novel	548	4	NA	NA	10	-3101	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	119	360	1	360	75.0	-4	True	ATTAAA	-8
PB.6771.1	chr2	+	4368	8	incomplete-splice_match	MBD5	ENST00000638043.2	7019	14	-85	43210	4	-1332	3prime_fragment	FALSE	canonical	1	45889	junction_5	11237.00858406575	NA	1	NA	TRUE	NA	NA	NA	B	coding	851	2556	1189	3744	35.0	-10	True	AATAAA	-28
PB.11202.1	chr8	+	1416	1	antisense	novelGene_TPD52_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6300.9	chr2	-	2556	13	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	-22	227	intron_retention	FALSE	canonical	1	24171	junction_2	96517.28092977127	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	118	1428	30.0	-48	True	AATAAA	-15
PB.9525.3	chr5	+	4791	4	full-splice_match	PCDHGA9	ENST00000573521.1	4605	4	-195	9	-174	-9	multi-exon	FALSE	canonical	1	13977	junction_1	313552.187902854	NA	4	1	TRUE	NA	NA	NA	A	coding	932	2799	196	2994	30.0	-5299	False	AATAAA	-12
PB.1155.32	chr1	-	4469	7	novel_in_catalog	LBR	novel	3745	14	NA	NA	-31	-5266	intron_retention	FALSE	canonical	1	411936	junction_6	145154.61452926285	NA	10	NA	TRUE	NA	NA	NA	C	coding	309	930	128	1057	85.0	-29	True	NA	NA
PB.11026.8	chr8	-	3979	4	novel_not_in_catalog	BIN3	novel	1835	9	NA	NA	-3	-3018	intron_retention	FALSE	canonical	0	0	junction_1	177386.80451550568	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	26	True	NA	NA
PB.823.1	chr1	-	2423	7	full-splice_match	GLMP	ENST00000647767.1	1941	7	8	-490	0	-1	multi-exon	FALSE	canonical	1	12302	junction_1	224689.58024009975	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	28	1248	15.0	-1	True	NA	NA
PB.8548.1	chr3	+	4097	2	full-splice_match	B3GNT5	ENST00000326505.3	4123	2	25	1	-14	-1	multi-exon	FALSE	canonical	1	70881	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	632	1642	30.0	16	True	AATAAA	-20
PB.10146.2	chr6	+	2768	3	full-splice_match	FOXO3	ENST00000406360.1	7341	3	546	4027	546	-10	multi-exon	FALSE	canonical	1	118	junction_2	31416.5	NA	5	NA	TRUE	NA	NA	NA	C	coding	597	1794	26	1819	85.0	-6821	False	ACTAAA	-19
PB.10146.3	chr6	+	2496	3	novel_not_in_catalog	FOXO3	novel	7308	4	NA	NA	28804	-10	any annotated donor/acceptor	FALSE	canonical	1	118	junction_2	335.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	186	1547	85.0	-4	True	ACTAAA	-19
PB.10146.1	chr6	+	3348	4	full-splice_match	FOXO3	ENST00000343882.10	7308	4	-73	4033	-73	-10	multi-exon	FALSE	canonical	1	118	junction_3	26553.43086851281	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	378	2399	85.0	-29	True	ACTAAA	-19
PB.10146.4	chr6	+	2567	3	full-splice_match	FOXO3	ENST00000540898.1	2553	3	-24	10	-24	-10	multi-exon	FALSE	canonical	1	118	junction_2	1301.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	257	1618	85.0	-3	True	ACTAAA	-19
PB.999.4	chr1	+	1993	14	full-splice_match	ODR4	ENST00000287859.10	3792	14	-28	1827	3	0	multi-exon	FALSE	non_canonical	0	0	junction_11	72862.76806874038	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	154	1518	65.0	-6	True	NA	NA
PB.11523.1	chr9	-	1781	9	novel_in_catalog	CD72	novel	2035	10	NA	NA	-40	-3	intron_retention	FALSE	canonical	1	5418	junction_8	39105.03793630688	NA	0	NA	TRUE	NA	NA	NA	A	coding	144	435	1012	1446	35.0	6	True	NA	NA
PB.9525.1	chr5	+	4773	4	full-splice_match	PCDHGB5	ENST00000617380.1	4578	4	-203	8	-62	-8	multi-exon	FALSE	canonical	1	52088	junction_1	295588.2848155898	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	204	2975	35.0	-4876	False	AATAAA	-13
PB.10955.10	chr7	-	3781	28	novel_in_catalog	NCAPG2	novel	4134	30	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	1	8228	junction_27	133644.943838996	NA	0	NA	TRUE	NA	NA	NA	C	coding	1096	3291	139	3429	30.0	33	True	AATAAA	-12
PB.7770.4	chr22	-	4042	18	novel_in_catalog	PLA2G6	novel	3271	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	20125	junction_4	57916.88964799707	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	93	1496	10.0	-1	True	AATAAA	-18
PB.7770.5	chr22	-	4008	20	novel_in_catalog	PLA2G6	novel	3271	17	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	7581	junction_6	61047.99550038444	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	88	1491	15.0	4	True	AATAAA	-13
PB.7770.6	chr22	-	3863	18	novel_in_catalog	PLA2G6	novel	3271	17	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	39011	junction_17	53837.01608446452	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	2094	3206	15.0	3	True	AATAAA	-11
PB.8220.5	chr3	-	4954	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	23	1872	10	149	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	4	NA	TRUE	NA	NA	NA	C	coding	1093	3282	195	3476	80.0	-7	True	NA	NA
PB.7770.1	chr22	-	3924	19	novel_in_catalog	PLA2G6	novel	3271	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	39011	junction_18	55248.30727804705	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	89	1492	10.0	3	True	AATAAA	-19
PB.7770.2	chr22	-	3194	17	novel_in_catalog	PLA2G6	novel	3271	17	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	39011	junction_16	53081.53763668682	NA	2	NA	TRUE	NA	NA	NA	C	coding	806	2421	109	2529	10.0	-17	True	AATAAA	-19
PB.7770.3	chr22	-	3011	16	full-splice_match	PLA2G6	ENST00000402064.5	3011	16	4	-4	3	0	multi-exon	FALSE	canonical	1	28253	junction_8	55764.19407333785	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	88	2346	10.0	4	True	AATAAA	-19
PB.11032.14	chr8	-	5084	8	novel_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	63	-6	intron_retention	FALSE	canonical	1	451236	junction_6	108798.27761748167	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	1524	2552	30.0	-1	True	ATTAAA	-15
PB.9079.8	chr4	-	2061	7	full-splice_match	DCTD	ENST00000510370.5	794	7	8	-1275	-2	7	multi-exon	FALSE	canonical	1	23028	junction_6	425580.78359839297	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	223	759	35.0	-3	True	ATTAAA	-24
PB.9079.9	chr4	-	2243	8	novel_in_catalog	DCTD	novel	1829	5	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	6724	junction_7	447352.4612075917	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	406	942	35.0	-1	True	ATTAAA	-23
PB.11624.1	chr9	+	3382	3	novel_not_in_catalog	RMI1	novel	1553	3	NA	NA	-347	-11	any annotated donor/acceptor	FALSE	canonical	1	2774	junction_1	41761.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	306	2183	55.0	-461	False	ATTAAA	-10
PB.9079.4	chr4	-	3309	5	novel_in_catalog	DCTD	novel	1829	5	NA	NA	-5	12	intron_retention	FALSE	canonical	1	250137	junction_4	325525.9176719843	NA	2	NA	TRUE	NA	NA	NA	C	coding	138	417	105	521	25.0	-6	True	ATTAAA	-29
PB.9079.7	chr4	-	2119	7	novel_in_catalog	DCTD	novel	1829	5	NA	NA	-2	11	combination_of_known_junctions	FALSE	canonical	1	6724	junction_6	439049.59836775716	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	247	813	25.0	7	True	ATTAAA	-28
PB.9079.1	chr4	-	1905	6	full-splice_match	DCTD	ENST00000357067.7	1931	6	32	-6	-2	6	multi-exon	FALSE	canonical	1	250137	junction_5	291217.3845106092	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	68	604	35.0	31	True	ATTAAA	-23
PB.9079.2	chr4	-	2698	7	novel_in_catalog	DCTD	novel	1829	5	NA	NA	-9	15	combination_of_known_junctions	FALSE	canonical	1	13201	junction_5	434780.76070768764	NA	1	1	TRUE	NA	NA	NA	C	coding	178	537	852	1388	30.0	-1	True	ATTAAA	-32
PB.10654.1	chr7	+	1266	5	full-splice_match	STEAP1	ENST00000297205.6	1313	5	49	-2	-32	0	multi-exon	FALSE	canonical	1	166310	junction_3	79556.96060488674	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	152	1171	15.0	5	True	AATAAA	-18
PB.4608.1	chr16	-	2315	2	full-splice_match	APRT	ENST00000564858.1	584	2	-27	-1704	-3	-1	multi-exon	FALSE	canonical	1	1883148	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	1695	2087	10.0	-20	True	AGTAAA	-14
PB.11410.2	chr8	-	2348	5	full-splice_match	ZNF251	ENST00000292562.11	2807	5	63	396	-56	-396	multi-exon	FALSE	canonical	1	45266	junction_4	37606.41645633761	NA	14	NA	TRUE	NA	NA	NA	C	coding	671	2016	214	2229	45.0	5915	False	AATAAA	-11
PB.11032.18	chr8	-	2231	9	full-splice_match	TNFRSF10B	ENST00000276431.8	4146	9	150	1765	2	413	multi-exon	FALSE	canonical	1	451236	junction_7	103682.81990515292	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	136	1458	40.0	1	True	AGTAAA	-16
PB.2828.2	chr12	+	1764	11	full-splice_match	ACTR6	ENST00000548180.5	1747	11	-18	1	-12	1	multi-exon	FALSE	canonical	1	16789	junction_3	103037.6898800143	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	391	1257	25.0	-17	True	AATAAA	-15
PB.2828.1	chr12	+	1756	11	full-splice_match	ACTR6	ENST00000188312.6	2464	11	710	-2	-14	1	multi-exon	FALSE	canonical	1	205827	junction_3	55160.75176835428	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	56	1246	25.0	-19	True	AATAAA	-18
PB.3804.16	chr15	-	2265	11	incomplete-splice_match	TMEM87A	ENST00000562946.5	1430	14	6	4424	5	840	3prime_fragment	FALSE	canonical	1	325884	junction_10	79892.8898588604	NA	99	9	TRUE	NA	NA	NA	B	coding	358	1077	30	1106	35.0	-13	True	AATAAA	-15
PB.11264.1	chr8	+	1872	4	full-splice_match	OSR2	ENST00000297565.8	1838	4	-42	8	-3	-4	multi-exon	FALSE	canonical	1	60254	junction_3	35801.21423452935	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	539	1477	35.0	-4560	False	AATAAA	-20
PB.10955.12	chr7	-	3669	27	novel_not_in_catalog	NCAPG2	novel	4134	30	NA	NA	43	-3	any annotated donor/acceptor	FALSE	canonical	1	277	junction_3	131036.48436459649	NA	14	NA	TRUE	NA	NA	NA	C	coding	1082	3249	72	3320	25.0	47	True	AATAAA	-9
PB.5911.3	chr19	+	4043	8	novel_in_catalog	KCTD15	novel	632	5	NA	NA	6	-8	intron_retention	FALSE	canonical	1	10281	junction_2	107200.7893913214	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	463	1236	30.0	-23	True	AATAAA	-16
PB.5911.2	chr19	+	2361	7	full-splice_match	KCTD15	ENST00000589786.5	1625	7	-28	-708	-12	4	multi-exon	FALSE	canonical	1	19621	junction_1	83157.26194670086	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	356	1129	25.0	-41	False	NA	NA
PB.5911.1	chr19	+	3947	7	novel_in_catalog	KCTD15	novel	632	5	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	25683	junction_1	81184.81504721187	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	361	1134	10.0	-43	False	AATAAA	-22
PB.178.6	chr1	+	4138	5	novel_in_catalog	CLIC4	novel	4346	6	NA	NA	38	-8	intron_retention	FALSE	canonical	1	583	junction_3	259164.7261688741	NA	4	NA	TRUE	NA	NA	NA	C	coding	135	408	352	759	35.0	0	True	AATAAA	-14
PB.5344.3	chr17	-	3682	9	full-splice_match	CSNK1D	ENST00000314028.10	3712	9	31	-1	-3	1	multi-exon	FALSE	canonical	1	242236	junction_1	383306.41373775626	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	320	1567	5.0	-1	True	AATAAA	-23
PB.5911.5	chr19	+	4188	7	novel_in_catalog	KCTD15	novel	632	5	NA	NA	-346	-2	intron_retention	FALSE	canonical	1	17568	junction_1	83828.54584209368	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	602	1375	10.0	1116	False	AATAAA	-22
PB.5911.4	chr19	+	3381	7	full-splice_match	KCTD15	ENST00000589786.5	1625	7	-10	-1746	6	-545	multi-exon	FALSE	canonical	1	19621	junction_1	83157.26194670086	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	338	1111	35.0	-23	True	AATAAA	-30
PB.3804.13	chr15	-	2196	19	novel_not_in_catalog	TMEM87A	novel	3049	19	NA	NA	-3	-21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	221730.79112574784	NA	9	2	TRUE	NA	NA	NA	B	coding	494	1485	164	1648	85.0	20	False	AAAAAG	-38
PB.11790.10	chr9	+	3440	19	novel_not_in_catalog	GAPVD1	novel	3720	16	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	96115.5098000658	NA	21	2	TRUE	NA	NA	NA	C	coding	993	2979	460	3438	80.0	-15	True	NA	NA
PB.11625.16	chr9	-	2787	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-16	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	790309.6513899389	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	238	1557	15.0	-34	True	AATAAA	-21
PB.2099.2	chr11	+	3150	21	novel_not_in_catalog	GRK2	novel	3466	21	NA	NA	1281	0	any annotated donor/acceptor	FALSE	canonical	1	4223	junction_1	378028.79598745855	NA	6	NA	TRUE	NA	NA	NA	C	coding	659	1980	65	2044	10.0	-9992	False	TATAAA	-14
PB.2099.1	chr11	+	3200	21	full-splice_match	GRK2	ENST00000308595.9	3466	21	265	1	194	0	multi-exon	FALSE	canonical	1	443641	junction_1	302747.1236659194	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	26	2095	15.0	-23	True	TATAAA	-13
PB.11647.9	chr9	-	4320	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	119479.81591280844	NA	0	NA	TRUE	NA	NA	NA	B	coding	1167	3504	472	3975	20.0	21	True	AATAAA	-12
PB.11647.8	chr9	-	3837	16	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	125117.21941436447	NA	27	3	TRUE	NA	NA	NA	B	coding	1129	3390	97	3486	15.0	-4	True	AATAAA	-18
PB.11647.7	chr9	-	4214	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	117193.2901513397	NA	1	NA	TRUE	NA	NA	NA	B	coding	1167	3504	360	3863	15.0	-38	False	AATAAA	-18
PB.11647.6	chr9	-	4741	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	121349.63380095137	NA	4	2	TRUE	NA	NA	NA	B	coding	1074	3225	97	3321	15.0	-4	True	AATAAA	-18
PB.11647.4	chr9	-	4081	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	115907.55945713201	NA	0	NA	TRUE	NA	NA	NA	B	coding	1167	3504	220	3723	20.0	-1	True	AATAAA	-25
PB.11647.3	chr9	-	3975	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	-4	11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	112803.76183718827	NA	0	NA	TRUE	NA	NA	NA	B	coding	1167	3504	109	3612	25.0	-16	True	AATAAA	-30
PB.11647.2	chr9	-	4196	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	115907.55945713201	NA	2	NA	TRUE	NA	NA	NA	B	coding	1167	3504	217	3720	20.0	2	True	GATAAA	-22
PB.11647.1	chr9	-	4093	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	112803.76183718827	NA	0	NA	TRUE	NA	NA	NA	B	coding	1167	3504	113	3616	20.0	-20	True	GATAAA	-23
PB.5344.2	chr17	-	3756	10	full-splice_match	CSNK1D	ENST00000392334.6	2047	10	-13	-1696	-13	1	multi-exon	FALSE	canonical	1	649219	junction_3	291258.5271426973	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	330	1559	5.0	-11	True	AATAAA	-23
PB.8105.9	chr3	-	3123	10	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	1530	junction_9	213835.1170193209	NA	1	NA	TRUE	NA	NA	NA	C	coding	776	2331	52	2382	40.0	-4	True	NA	NA
PB.8348.31	chr3	+	2210	1	novel_in_catalog	PARP14	novel	7915	17	NA	NA	6381	-3851	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	151	456	262	717	70.0	-1041	False	NA	NA
PB.4254.8	chr16	-	1752	9	full-splice_match	RSL1D1	ENST00000571133.5	5483	9	50	3681	7	187	multi-exon	FALSE	canonical	1	1129263	junction_7	480402.67578588106	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	24	1496	65.0	-2	True	NA	NA
PB.4254.9	chr16	-	1480	9	full-splice_match	RSL1D1	ENST00000571133.5	5483	9	24	3979	-17	-111	multi-exon	FALSE	canonical	1	1129263	junction_7	480402.67578588106	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1431	50	1480	60.0	10	False	AGTAAA	-28
PB.4254.6	chr16	-	1923	9	full-splice_match	RSL1D1	ENST00000571133.5	5483	9	29	3531	-12	337	multi-exon	FALSE	canonical	1	1129263	junction_7	480402.67578588106	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	45	1517	80.0	15	False	NA	NA
PB.6840.9	chr2	+	4206	11	novel_in_catalog	PDK1	novel	842	5	NA	NA	-7	-312	intron_retention	FALSE	canonical	1	30822	junction_7	109301.2470919248	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	57	965	40.0	5	True	AATAAA	-21
PB.4254.4	chr16	-	4077	9	full-splice_match	RSL1D1	ENST00000571133.5	5483	9	50	1356	7	-1356	multi-exon	FALSE	canonical	1	1129263	junction_7	480402.67578588106	NA	2	1	TRUE	NA	NA	NA	C	coding	490	1473	24	1496	90.0	-2	True	NA	NA
PB.4254.5	chr16	-	2134	9	full-splice_match	RSL1D1	ENST00000571133.5	5483	9	42	3307	-1	561	multi-exon	FALSE	canonical	1	1129263	junction_7	480402.67578588106	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	32	1504	80.0	-10	True	NA	NA
PB.4254.2	chr16	-	2246	10	novel_not_in_catalog	RSL1D1	novel	5483	9	NA	NA	8	-440	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	738145.6454687442	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	23	1495	40.0	-1	True	NA	NA
PB.4254.3	chr16	-	1929	10	novel_not_in_catalog	RSL1D1	novel	5483	9	NA	NA	-9	-456	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	738145.6454687442	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	17	1237	40.0	5	True	NA	NA
PB.4254.1	chr16	-	2420	10	novel_not_in_catalog	RSL1D1	novel	5483	9	NA	NA	8	-440	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	738145.6454687442	NA	1	1	TRUE	NA	NA	NA	C	coding	490	1473	61	1533	40.0	-1	True	NA	NA
PB.2733.4	chr12	+	4410	7	full-splice_match	MSRB3	ENST00000308259.9	4417	7	0	7	0	2	multi-exon	FALSE	canonical	1	46200	junction_1	93153.69005290249	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	275	832	35.0	-811	False	AATAAA	-11
PB.2733.5	chr12	+	1539	7	full-splice_match	MSRB3	ENST00000308259.9	4417	7	81	2797	-8	721	multi-exon	FALSE	canonical	1	46200	junction_1	93153.69005290249	NA	2	NA	TRUE	NA	NA	NA	C	coding	185	558	194	751	60.0	24	True	NA	NA
PB.2733.1	chr12	+	4221	6	full-splice_match	MSRB3	ENST00000355192.8	4290	6	62	7	1	2	multi-exon	FALSE	canonical	1	84244	junction_1	74419.48240454243	NA	2	NA	TRUE	NA	NA	NA	C	coding	192	579	65	643	35.0	5	True	AATAAA	-11
PB.2733.2	chr12	+	1875	7	full-splice_match	MSRB3	ENST00000308259.9	4417	7	82	2460	-7	1058	multi-exon	FALSE	canonical	1	46200	junction_1	93153.69005290249	NA	2	NA	TRUE	NA	NA	NA	C	coding	185	558	193	750	85.0	25	True	NA	NA
PB.2733.3	chr12	+	1768	6	full-splice_match	MSRB3	ENST00000355192.8	4290	6	62	2460	1	1058	multi-exon	FALSE	canonical	1	84244	junction_1	74419.48240454243	NA	3	NA	TRUE	NA	NA	NA	C	coding	192	579	65	643	85.0	5	True	NA	NA
PB.9769.12	chr6	-	2669	11	full-splice_match	DEK	ENST00000397239.7	3427	11	283	475	1	-126	multi-exon	FALSE	canonical	1	691145	junction_10	442944.1591673718	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	166	1293	30.0	-17	True	TATAAA	-17
PB.9769.13	chr6	-	2570	11	full-splice_match	DEK	ENST00000397239.7	3427	11	276	581	1	-232	multi-exon	FALSE	canonical	1	691145	junction_10	442944.1591673718	NA	4	NA	TRUE	NA	NA	NA	C	coding	375	1128	173	1300	40.0	282	False	ATTAAA	-11
PB.9769.14	chr6	-	2424	11	full-splice_match	DEK	ENST00000397239.7	3427	11	290	713	2	-364	multi-exon	FALSE	canonical	1	691145	junction_10	442944.1591673718	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	159	1286	10.0	-10	True	ATTAAA	-27
PB.8732.3	chr4	+	3501	19	novel_in_catalog	TBC1D1	novel	4119	21	NA	NA	96	3	combination_of_known_junctions	FALSE	canonical	1	106744	junction_1	150105.09465589208	NA	0	NA	TRUE	NA	NA	NA	C	coding	1039	3120	95	3214	5.0	-6	True	AATAAA	-19
PB.8732.2	chr4	+	1644	3	full-splice_match	TBC1D1	ENST00000402522.1	1567	3	-89	12	-77	-12	multi-exon	FALSE	canonical	1	44244	junction_2	861.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	433	867	65.0	-77	False	NA	NA
PB.8732.1	chr4	+	4166	20	full-splice_match	TBC1D1	ENST00000261439.8	5700	20	-9	1543	-9	3	multi-exon	FALSE	canonical	1	45967	junction_1	176970.42919736385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1168	3507	365	3871	10.0	-9	True	AATAAA	-27
PB.11657.3	chr9	-	2821	3	full-splice_match	FAM120AOS	ENST00000479094.5	1905	3	-30	-886	8	886	multi-exon	FALSE	canonical	1	65879	junction_2	107917.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	24	75	451	525	100.0	-1	True	NA	NA
PB.11657.4	chr9	-	2771	3	full-splice_match	FAM120AOS	ENST00000375412.10	5925	3	-3	3157	-3	-3	multi-exon	FALSE	canonical	1	17906	junction_2	131903.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	887	1657	30.0	-15	True	AGTAAA	-22
PB.8732.5	chr4	+	1870	9	novel_not_in_catalog	TBC1D1	novel	4119	21	NA	NA	-24309	3	any annotated donor/acceptor	FALSE	canonical	1	9102	junction_1	212598.97300283314	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	91	1575	10.0	-31	False	AATAAA	-27
PB.11657.7	chr9	-	2304	4	full-splice_match	FAM120AOS	ENST00000520470.5	1553	4	-343	-408	-8	-3	multi-exon	FALSE	canonical	1	20696	junction_3	108570.72084232574	NA	0	NA	TRUE	NA	NA	NA	C	coding	78	237	110	346	30.0	-20	True	AGTAAA	-22
PB.11657.8	chr9	-	2142	3	novel_not_in_catalog	FAM120AOS	novel	2613	8	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	140856.5	NA	1	1	TRUE	NA	NA	NA	C	coding	24	75	460	534	30.0	-10	True	AGTAAA	-22
PB.11657.9	chr9	-	1887	4	full-splice_match	FAM120AOS	ENST00000476484.5	1491	4	31	-427	-1	-3	multi-exon	FALSE	canonical	1	92513	junction_2	90722.27641666749	NA	0	NA	TRUE	NA	NA	NA	C	coding	58	177	428	604	30.0	-13	True	AGTAAA	-22
PB.11790.12	chr9	+	3309	18	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	4	0	intron_retention	FALSE	canonical	1	2010	junction_2	83657.41127730033	NA	1	1	TRUE	NA	NA	NA	C	coding	993	2979	329	3307	80.0	-12	True	NA	NA
PB.3376.5	chr14	-	1722	5	full-splice_match	EGLN3	ENST00000250457.7	2709	5	2	985	2	183	multi-exon	FALSE	canonical	1	213689	junction_2	19682.92753885966	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	328	1047	20.0	-6	True	AATAAA	-12
PB.10955.15	chr7	-	5495	28	full-splice_match	NCAPG2	ENST00000409339.3	5253	28	-12	-230	-6	230	multi-exon	FALSE	canonical	1	24875	junction_1	111192.35279438336	NA	3	NA	TRUE	NA	NA	NA	C	coding	1156	3471	127	3597	15.0	-8	True	AATAAA	-21
PB.6840.6	chr2	+	4111	9	novel_in_catalog	PDK1	novel	842	5	NA	NA	1	-312	intron_retention	FALSE	canonical	1	1657	junction_5	92367.74750411735	NA	10	NA	TRUE	NA	NA	NA	C	coding	256	771	100	870	40.0	-38	True	AATAAA	-21
PB.7024.23	chr2	+	2775	9	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-2	0	intron_retention	FALSE	canonical	1	6601	junction_1	175396.47576807058	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1415	1924	30.0	7	True	AATAAA	-12
PB.7024.22	chr2	+	2300	13	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	4439	junction_2	155899.95459559868	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	88	2100	30.0	6	True	AATAAA	-8
PB.7024.21	chr2	+	2399	14	novel_not_in_catalog	ANKZF1	novel	2579	14	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	11384	junction_10	168277.48955198124	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	229	1833	30.0	5	True	AATAAA	-12
PB.7024.20	chr2	+	2701	12	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	1	-4	intron_retention	FALSE	canonical	1	39006	junction_2	151035.7871191269	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	233	1732	30.0	1	True	AATAAA	-8
PB.10878.30	chr7	+	2960	15	novel_not_in_catalog	LUC7L2	novel	1525	11	NA	NA	28	-17	any annotated donor/acceptor	FALSE	canonical	1	3571	junction_2	573997.4145570017	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	1097	2116	40.0	-16	True	ATTAAA	-17
PB.7143.21	chr20	+	3456	24	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	18	0	any annotated donor/acceptor	FALSE	canonical	1	4104	junction_20	267490.11523611174	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	354	2372	20.0	18	True	AATAAA	-16
PB.7143.20	chr20	+	2544	21	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	13	-310	no_combination_of_known_junctions	FALSE	canonical	1	2587	junction_3	240568.64486401796	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	376	2319	30.0	13	True	ATTAAA	-20
PB.7804.10	chr22	+	2537	22	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5561	19825	any annotated donor/acceptor	FALSE	canonical	1	25575	junction_21	153587.8305108792	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	209	2428	5.0	-14	True	NA	NA
PB.7804.11	chr22	+	2652	21	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5563	19637	any annotated donor/acceptor	FALSE	canonical	1	20136	junction_3	180126.9274964948	NA	15	NA	TRUE	NA	NA	NA	C	coding	686	2061	251	2311	30.0	-12	True	AATAAA	-13
PB.3368.9	chr14	+	2870	11	full-splice_match	COCH	ENST00000644874.1	2884	11	12	2	12	0	multi-exon	FALSE	canonical	1	105592	junction_2	72693.03736019014	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	393	2045	25.0	-12	True	AATAAA	-20
PB.3368.8	chr14	+	1874	13	novel_in_catalog	COCH	novel	2582	11	NA	NA	3	-11	combination_of_known_junctions	FALSE	canonical	1	7284	junction_12	101627.29688052839	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	78	1730	100.0	6	True	NA	NA
PB.7804.14	chr22	+	3016	21	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5575	19637	intron_retention	FALSE	canonical	1	341256	junction_7	94413.83939682784	NA	1	NA	TRUE	NA	NA	NA	C	coding	663	1992	195	2186	30.0	0	True	AATAAA	-13
PB.7804.15	chr22	+	2558	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5575	19637	no_combination_of_known_junctions	FALSE	canonical	1	12110	junction_5	180415.46291093904	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	313	2217	30.0	0	True	AATAAA	-13
PB.7804.16	chr22	+	3224	21	novel_not_in_catalog	ADSL	novel	1734	14	NA	NA	5577	19827	intron_retention	FALSE	canonical	1	72675	junction_17	142146.85745699762	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	193	2091	10.0	2	True	NA	NA
PB.7804.17	chr22	+	2858	20	novel_in_catalog	ADSL	novel	1734	14	NA	NA	5577	19639	intron_retention	FALSE	canonical	1	118069	junction_2	145763.3432948147	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	311	2413	30.0	2	True	AATAAA	-15
PB.3368.3	chr14	+	2293	12	novel_in_catalog	COCH	novel	2582	11	NA	NA	0	35	combination_of_known_junctions	FALSE	canonical	1	6177	junction_3	102004.41485397816	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	102	1949	35.0	2	True	AATAAA	-20
PB.3368.2	chr14	+	2588	12	full-splice_match	COCH	ENST00000396618.8	2571	12	-19	2	-9	0	multi-exon	FALSE	canonical	1	53060	junction_1	86861.99121576101	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	111	1763	25.0	-7	True	AATAAA	-20
PB.3368.1	chr14	+	2064	12	full-splice_match	COCH	ENST00000396618.8	2571	12	24	483	-11	35	multi-exon	FALSE	canonical	1	53060	junction_1	86861.99121576101	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	68	1720	35.0	-11	True	AATAAA	-20
PB.9159.8	chr5	+	4484	4	incomplete-splice_match	PURPL	ENST00000505775.5	946	6	-22	5468	-7	2704	3prime_fragment	FALSE	canonical	1	8385	junction_2	17961.676443658223	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	237	539	30.0	-16	True	AATAAA	-19
PB.3368.7	chr14	+	2131	13	novel_in_catalog	COCH	novel	2582	11	NA	NA	3	35	combination_of_known_junctions	FALSE	canonical	1	7622	junction_9	113884.03503158987	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	78	1787	35.0	6	True	AATAAA	-20
PB.2085.1	chr11	-	2017	2	full-splice_match	B4GAT1	ENST00000311181.4	2072	2	53	2	53	-2	multi-exon	FALSE	canonical	1	451352	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	415	1248	95	1342	10.0	-11	True	AATAAA	-17
PB.3368.5	chr14	+	2328	12	novel_not_in_catalog	COCH	novel	2582	11	NA	NA	-3	35	any annotated donor/acceptor	FALSE	canonical	1	1385	junction_1	96546.53428492267	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	332	1984	35.0	0	True	AATAAA	-20
PB.3368.4	chr14	+	2618	12	novel_not_in_catalog	COCH	novel	2582	11	NA	NA	-3	35	intron_retention	FALSE	canonical	1	469	junction_3	111079.58856134946	NA	9	NA	TRUE	NA	NA	NA	C	coding	438	1317	958	2274	35.0	0	True	AATAAA	-20
PB.11520.7	chr9	-	2268	4	novel_not_in_catalog	FAM214B	novel	2566	10	NA	NA	-90	-1	intron_retention	FALSE	canonical	0	0	junction_1	67296.34197256854	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	536	1408	25.0	-76	False	AATAAA	-18
PB.9295.4	chr5	-	3072	22	full-splice_match	GFM2	ENST00000509430.5	3047	22	-31	6	10	-6	multi-exon	FALSE	canonical	1	704	junction_20	103940.28315525486	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	246	2681	50.0	-23	True	AATAAA	-13
PB.585.2	chr1	+	2453	14	incomplete-splice_match	GPSM2	ENST00000264126.8	3029	15	0	6062	0	-1	3prime_fragment	FALSE	canonical	1	78176	junction_1	60789.69725539326	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	493	2376	20.0	0	True	NA	NA
PB.12031.9	chrX	-	4862	31	novel_in_catalog	MED14	novel	7984	31	NA	NA	-54	-1742	combination_of_known_junctions	FALSE	canonical	1	26755	junction_30	86840.01780802954	NA	0	NA	TRUE	NA	NA	NA	C	coding	1338	4017	325	4341	70.0	-29	True	AATAAA	-9
PB.8623.2	chr3	+	3235	3	full-splice_match	FBXO45	ENST00000440469.1	3689	3	61	393	-16	-393	multi-exon	FALSE	canonical	1	4502	junction_1	104146.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	336	659	80.0	6	True	NA	NA
PB.585.3	chr1	+	3073	16	novel_in_catalog	GPSM2	novel	7433	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	6338	junction_1	87569.12276098745	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	538	2592	30.0	1	True	TATAAA	-37
PB.12031.3	chrX	-	6516	31	novel_in_catalog	MED14	novel	7984	31	NA	NA	30	-4	combination_of_known_junctions	FALSE	canonical	1	26755	junction_30	86840.01780802954	NA	7	2	TRUE	NA	NA	NA	C	coding	1338	4017	241	4257	35.0	-2	True	AATAAA	-23
PB.12031.1	chrX	-	7111	31	full-splice_match	MED14	ENST00000324817.5	7984	31	-365	1238	-38	-1	multi-exon	FALSE	canonical	1	94460	junction_30	80500.21720290917	NA	4	NA	TRUE	NA	NA	NA	C	coding	1454	4365	485	4849	35.0	-13	True	AATAAA	-26
PB.12031.7	chrX	-	6398	31	novel_in_catalog	MED14	novel	7984	31	NA	NA	-22	-174	combination_of_known_junctions	FALSE	canonical	1	26755	junction_30	86840.01780802954	NA	1	NA	TRUE	NA	NA	NA	C	coding	1338	4017	293	4309	40.0	3	True	ATTAAA	-29
PB.12031.6	chrX	-	6832	31	full-splice_match	MED14	ENST00000324817.5	7984	31	-267	1419	60	-182	multi-exon	FALSE	canonical	1	94460	junction_30	80500.21720290917	NA	0	NA	TRUE	NA	NA	NA	C	coding	1454	4365	387	4751	35.0	1	True	ATTAAA	-21
PB.12031.5	chrX	-	6309	31	novel_not_in_catalog	MED14	novel	7984	31	NA	NA	-58	-163	any annotated donor/acceptor	FALSE	canonical	1	9675	junction_30	88631.17795454373	NA	2	NA	TRUE	NA	NA	NA	C	coding	1338	4017	193	4209	20.0	-33	True	ATTAAA	-40
PB.12031.4	chrX	-	4582	31	novel_in_catalog	MED14	novel	7984	31	NA	NA	-48	-6	combination_of_known_junctions	FALSE	canonical	1	10411	junction_1	95521.13854747312	NA	1	1	TRUE	NA	NA	NA	C	coding	1443	4332	168	4499	40.0	-1	True	AATAAA	-21
PB.10338.82	chr6	-	3911	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-9	52	no_combination_of_known_junctions	FALSE	canonical	1	12566	junction_12	123520.72896314813	NA	2	NA	TRUE	NA	NA	NA	C	coding	1114	3345	147	3491	20.0	-2	True	GATAAA	-27
PB.6098.1	chr19	-	3064	19	novel_not_in_catalog	STRN4	novel	3210	18	NA	NA	31	0	any annotated donor/acceptor	FALSE	canonical	1	71	junction_18	217278.9073521307	NA	0	NA	TRUE	NA	NA	NA	A	coding	634	1905	268	2172	25.0	0	True	AATAAA	-12
PB.11337.1	chr8	+	1182	8	full-splice_match	NSMCE2	ENST00000287437.7	1195	8	10	3	-1	1	multi-exon	FALSE	canonical	1	174306	junction_1	75417.3344830657	NA	0	NA	TRUE	NA	NA	NA	A	coding	247	744	207	950	10.0	3	True	AATAAA	-14
PB.4891.5	chr17	-	4274	17	novel_in_catalog	UTP6	novel	4392	19	NA	NA	8	0	intron_retention	FALSE	canonical	1	227926	junction_14	119734.04616519832	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	131	1123	10.0	-77	False	ATTAAA	-16
PB.4891.4	chr17	-	2153	20	novel_in_catalog	UTP6	novel	4392	19	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	19350	junction_3	161603.05453678075	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	113	1774	5.0	-59	True	ATTAAA	-17
PB.178.7	chr1	+	4348	7	novel_in_catalog	CLIC4	novel	4346	6	NA	NA	3	-7	intron_retention	FALSE	canonical	1	583	junction_5	682523.8809337858	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	333	968	40.0	0	True	AATAAA	-15
PB.4891.6	chr17	-	1977	18	novel_in_catalog	UTP6	novel	4392	19	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	17785	junction_7	149700.77556982668	NA	2	NA	TRUE	NA	NA	NA	C	coding	335	1008	81	1088	10.0	-27	True	ATTAAA	-14
PB.4891.1	chr17	-	2882	19	full-splice_match	UTP6	ENST00000261708.8	4392	19	23	1487	23	787	multi-exon	FALSE	canonical	1	227926	junction_16	112939.29270876259	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	116	1909	50.0	-62	True	NA	NA
PB.10507.2	chr7	-	899	8	full-splice_match	PSMA2	ENST00000223321.8	1487	8	34	554	-4	2	multi-exon	FALSE	canonical	1	1444276	junction_6	303603.5816723606	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	32	736	15.0	-16	True	AATAAA	-14
PB.4891.3	chr17	-	2029	18	novel_in_catalog	UTP6	novel	4392	19	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	1	18976	junction_1	129830.97556235972	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	122	1705	5.0	-68	True	ATTAAA	-18
PB.4891.2	chr17	-	2035	19	full-splice_match	UTP6	ENST00000261708.8	4392	19	84	2273	-8	1	multi-exon	FALSE	canonical	1	227926	junction_16	112939.29270876259	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	55	1848	5.0	-1	True	ATTAAA	-18
PB.6379.2	chr2	+	2148	18	incomplete-splice_match	NRBP1	ENST00000233557.7	2887	19	870	4	7	0	5prime_fragment	FALSE	canonical	1	579488	junction_1	242917.1553187897	NA	0	NA	TRUE	NA	NA	NA	B	coding	535	1608	98	1705	20.0	1	True	AATAAA	-16
PB.11943.1	chrX	-	4987	2	full-splice_match	P2RY8	ENST00000381297.9	4198	2	-78	-711	-78	711	multi-exon	FALSE	canonical	1	2753	junction_1	0.0	NA	22	NA	TRUE	NA	NA	NA	C	coding	359	1080	290	1369	50.0	-1	True	NA	NA
PB.11943.2	chrX	-	4243	2	full-splice_match	P2RY8	ENST00000460672.6	407	2	-28	-3808	-28	-57	multi-exon	FALSE	canonical	1	65	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	314	1393	80.0	-2	True	NA	NA
PB.11943.3	chrX	-	4360	3	novel_not_in_catalog	P2RY8	novel	4198	2	NA	NA	-79	-4	any annotated donor/acceptor	TRUE	canonical	1	34	junction_1	48.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	378	1457	15.0	-2	True	ATTAAA	-30
PB.11943.5	chrY	-	4322	2	full-splice_match	P2RY8	ENST00000381297.9_PAR_Y	4198	2	-181	57	-181	-57	multi-exon	FALSE	canonical	1	117	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	393	1472	80.0	NA	False	NA	NA
PB.11943.6	chrY	-	3857	1	incomplete-splice_match	P2RY8	ENST00000381297.9_PAR_Y	4198	2	70622	57	27868	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	308	927	81	1007	80.0	NA	False	NA	NA
PB.8242.16	chr3	+	6323	8	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-21	-7	no_combination_of_known_junctions	FALSE	canonical	1	8369	junction_3	26551.633207770854	NA	7	NA	TRUE	NA	NA	NA	C	coding	916	2751	568	3318	35.0	-13	True	AATAAA	-14
PB.11700.27	chr9	+	3077	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	34	7400	34	-6072	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	214	2187	55.0	5	True	AATAAA	-19
PB.585.5	chr1	+	2765	15	novel_in_catalog	GPSM2	novel	7433	16	NA	NA	6	-26	combination_of_known_junctions	FALSE	canonical	1	7469	junction_1	73195.38453972604	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	255	2309	30.0	6	True	TATAAA	-12
PB.3473.4	chr14	+	1641	7	full-splice_match	JKAMP	ENST00000425728.6	1636	7	5	-10	5	-2	multi-exon	FALSE	canonical	1	96109	junction_1	188423.60228728424	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	83	1000	30.0	-9	True	AATAAA	-23
PB.3473.5	chr14	+	3769	6	full-splice_match	JKAMP	ENST00000602482.5	2302	6	-2172	705	6	0	multi-exon	FALSE	canonical	1	411898	junction_4	100468.8694929927	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	2591	3136	40.0	-8	True	AATAAA	-15
PB.3473.6	chr14	+	1651	7	full-splice_match	JKAMP	ENST00000261247.13	1726	7	66	9	6	1	multi-exon	FALSE	canonical	1	273446	junction_1	134592.50475622911	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	82	1017	35.0	-8	True	AATAAA	-16
PB.3473.7	chr14	+	1565	6	full-splice_match	JKAMP	ENST00000616435.4	2338	6	74	699	-11	0	multi-exon	FALSE	canonical	1	10727	junction_5	248374.1924221597	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	74	715	40.0	0	True	AATAAA	-15
PB.3473.1	chr14	+	2276	7	full-splice_match	JKAMP	ENST00000261247.13	1726	7	57	-607	-3	-82	multi-exon	FALSE	canonical	1	273446	junction_1	134592.50475622911	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	91	1026	80.0	-17	True	AATGAA	-35
PB.3473.2	chr14	+	2266	7	full-splice_match	JKAMP	ENST00000425728.6	1636	7	-8	-622	3	-79	multi-exon	FALSE	canonical	1	96109	junction_1	188423.60228728424	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	96	1013	75.0	-22	True	AATGAA	-38
PB.3473.3	chr14	+	2201	6	full-splice_match	JKAMP	ENST00000616435.4	2338	6	55	82	-5	-82	multi-exon	FALSE	canonical	1	10727	junction_5	248374.1924221597	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	93	734	80.0	-19	True	AATGAA	-35
PB.9145.4	chr5	-	1478	6	full-splice_match	CMBL	ENST00000296658.3	2335	6	180	677	-7	512	multi-exon	FALSE	canonical	1	282566	junction_5	65371.91610347673	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	242	979	75.0	55	True	NA	NA
PB.11520.1	chr9	-	3074	10	novel_not_in_catalog	FAM214B	novel	2566	10	NA	NA	-18	-1	any annotated donor/acceptor	TRUE	canonical	1	6482	junction_7	64533.488409669815	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	464	1966	5.0	-4	True	AATAAA	-29
PB.3473.8	chr14	+	2140	7	full-splice_match	JKAMP	ENST00000554271.5	2137	7	-3	0	-3	0	multi-exon	FALSE	canonical	1	17943	junction_1	214340.04452692816	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	530	1507	40.0	25	True	AATAAA	-15
PB.3473.9	chr14	+	2118	7	novel_in_catalog	JKAMP	novel	1726	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	7185	junction_1	217970.48729389693	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	526	1485	40.0	29	True	AATAAA	-15
PB.9145.2	chr5	-	2011	6	novel_in_catalog	CMBL	novel	442	2	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	1	15086	junction_5	170489.21487249568	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	101	838	20.0	-3	True	AATAAA	-17
PB.9145.3	chr5	-	1904	6	full-splice_match	CMBL	ENST00000296658.3	2335	6	148	283	-19	-283	multi-exon	FALSE	canonical	1	282566	junction_5	65371.91610347673	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	274	1011	80.0	23	True	NA	NA
PB.1650.29	chr10	+	2003	12	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	9	-148	combination_of_known_junctions	FALSE	canonical	1	74591	junction_2	370427.07931655284	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	154	1521	50.0	0	True	AGTAAA	-36
PB.10517.3	chr7	+	2150	13	novel_in_catalog	DBNL	novel	1808	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	52824	junction_8	378944.27844451397	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	37	1353	20.0	0	True	NA	NA
PB.10517.4	chr7	+	2349	13	full-splice_match	DBNL	ENST00000448521.5	1808	13	42	-583	-4	200	multi-exon	FALSE	canonical	1	631571	junction_2	250021.7444019731	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	57	1349	10.0	-20	True	NA	NA
PB.10517.5	chr7	+	1958	12	novel_not_in_catalog	DBNL	novel	1808	13	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	420834.9235305635	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	51	1160	25.0	-14	True	NA	NA
PB.10517.6	chr7	+	2125	13	full-splice_match	DBNL	ENST00000448521.5	1808	13	64	-381	-2	0	multi-exon	FALSE	canonical	1	631571	junction_2	250021.7444019731	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	35	1327	25.0	2	True	NA	NA
PB.10517.7	chr7	+	5111	13	full-splice_match	DBNL	ENST00000448521.5	1808	13	57	-3360	-5	2977	multi-exon	FALSE	canonical	1	631571	junction_2	250021.7444019731	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	42	1334	20.0	-5	True	ACTAAA	-13
PB.1650.20	chr10	+	2546	11	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	5	454	combination_of_known_junctions	FALSE	canonical	1	18722	junction_1	363514.79579620966	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	611	1462	25.0	-4	True	AATAAA	-44
PB.9246.5	chr5	+	5266	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-8	2359	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	30	2093	25.0	0	True	AATAAA	-15
PB.1650.22	chr10	+	2268	13	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	6	30	no_combination_of_known_junctions	FALSE	canonical	1	3970	junction_3	454522.31929896434	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	757	1608	20.0	-3	True	AATAAA	-25
PB.1650.23	chr10	+	2733	13	full-splice_match	PDCD4	ENST00000393104.6	3697	13	131	833	7	454	multi-exon	FALSE	canonical	1	28695	junction_3	450406.8245803824	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	273	1649	25.0	-2	True	AATAAA	-44
PB.1650.24	chr10	+	2108	11	novel_in_catalog	PDCD4	novel	3697	13	NA	NA	7	24	combination_of_known_junctions	FALSE	canonical	1	16917	junction_9	409588.51329962857	NA	2	1	TRUE	NA	NA	NA	C	coding	432	1299	156	1454	25.0	-2	True	AATAAA	-19
PB.1650.25	chr10	+	2092	12	novel_not_in_catalog	PDCD4	novel	3697	13	NA	NA	7	20	any annotated donor/acceptor	FALSE	canonical	1	873	junction_2	387472.92039136303	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	591	1442	20.0	-2	True	AATAAA	-15
PB.1650.26	chr10	+	3565	13	full-splice_match	PDCD4	ENST00000393104.6	3697	13	132	0	8	0	multi-exon	FALSE	canonical	1	28695	junction_3	450406.8245803824	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	272	1648	45.0	-1	True	AATAAA	-19
PB.9246.3	chr5	+	5352	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	252	-3065	-38	2358	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	60	2180	25.0	-30	True	AATAAA	-14
PB.8345.1	chr3	+	5578	5	full-splice_match	DTX3L	ENST00000296161.8	5868	5	288	2	99	-2	multi-exon	FALSE	canonical	1	174164	junction_1	58352.22142301011	NA	3	NA	TRUE	NA	NA	NA	C	coding	625	1878	247	2124	10.0	-9591	False	AATAAA	-18
PB.8345.3	chr3	+	4369	5	full-splice_match	DTX3L	ENST00000296161.8	5868	5	100	1399	-89	-1399	multi-exon	FALSE	canonical	1	174164	junction_1	58352.22142301011	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	90	2312	10.0	-39	True	NA	NA
PB.8345.2	chr3	+	2362	5	full-splice_match	DTX3L	ENST00000296161.8	5868	5	112	3394	-77	62	multi-exon	FALSE	canonical	1	174164	junction_1	58352.22142301011	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	78	2300	30.0	-27	True	AATATA	-17
PB.8345.5	chr3	+	3464	5	full-splice_match	DTX3L	ENST00000296161.8	5868	5	101	2303	-88	1153	multi-exon	FALSE	canonical	1	174164	junction_1	58352.22142301011	NA	1	NA	TRUE	NA	NA	NA	C	coding	740	2223	89	2311	35.0	-38	True	NA	NA
PB.8345.4	chr3	+	5093	6	novel_not_in_catalog	DTX3L	novel	5868	5	NA	NA	-89	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	110025.50855797032	NA	6	NA	TRUE	NA	NA	NA	C	coding	740	2223	90	2312	25.0	-39	True	AATAAA	-14
PB.8345.7	chr3	+	4993	5	full-splice_match	DTX3L	ENST00000296161.8	5868	5	101	774	-88	-774	multi-exon	FALSE	canonical	1	174164	junction_1	58352.22142301011	NA	3	NA	TRUE	NA	NA	NA	C	coding	740	2223	89	2311	70.0	-38	True	NA	NA
PB.8345.6	chr3	+	5700	5	novel_not_in_catalog	DTX3L	novel	5868	5	NA	NA	-88	-6	any annotated donor/acceptor	FALSE	canonical	1	500	junction_1	122323.05084897122	NA	1	NA	TRUE	NA	NA	NA	C	coding	625	1878	373	2250	25.0	-38	True	AATAAA	-14
PB.4573.12	chr16	+	4028	32	novel_not_in_catalog	PLCG2	novel	912	6	NA	NA	-630	271	intron_retention	FALSE	canonical	1	1300	junction_1	112172.65425455513	NA	2	NA	TRUE	NA	NA	NA	C	coding	1198	3597	139	3735	25.0	13	False	AATAAA	-15
PB.4573.13	chr16	+	3663	29	incomplete-splice_match	PLCG2	ENST00000564138.5	8707	33	79856	4401	1169	272	5prime_fragment	FALSE	canonical	1	183508	junction_2	99347.94186427363	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	199	3369	25.0	NA	False	AATAAA	-16
PB.4573.10	chr16	+	3977	32	novel_not_in_catalog	PLCG2	novel	912	6	NA	NA	12746	273	intron_retention	FALSE	canonical	1	10585	junction_1	111341.47464555902	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	86	3682	25.0	-5	True	AATAAA	-17
PB.4573.11	chr16	+	4003	32	novel_not_in_catalog	PLCG2	novel	912	6	NA	NA	19557	272	intron_retention	FALSE	canonical	1	856	junction_1	112212.84710724825	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	14	3709	25.0	-886	False	AATAAA	-16
PB.866.7	chr1	-	4221	11	full-splice_match	ARHGAP30	ENST00000490279.5	2265	11	-112	-1844	0	0	multi-exon	FALSE	canonical	1	21165	junction_9	104250.77809090924	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	609	3452	25.0	-25	True	AATAAA	-16
PB.10684.1	chr7	+	3219	3	incomplete-splice_match	ASB4	ENST00000325885.5	3825	5	41935	25	41935	-25	5prime_fragment	FALSE	canonical	1	8021	junction_2	93.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	219	660	112	771	30.0	1432	False	ATTAAA	-41
PB.8018.3	chr3	+	3267	3	novel_in_catalog	MYD88	novel	2712	4	NA	NA	-16	0	intron_retention	FALSE	canonical	1	297694	junction_1	178750.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	67	585	20.0	-26	True	AATAAA	-17
PB.866.5	chr1	-	4162	11	novel_in_catalog	ARHGAP30	novel	4857	10	NA	NA	-14	0	intron_retention	FALSE	canonical	1	16945	junction_10	105000.79831048904	NA	2	NA	TRUE	NA	NA	NA	C	coding	953	2862	535	3396	30.0	-1	True	AATAAA	-13
PB.780.15	chr1	-	6429	15	full-splice_match	ADAR	ENST00000649724.1	6425	15	10	-14	1	3	multi-exon	FALSE	canonical	1	35589	junction_14	349423.35708870814	NA	4	NA	TRUE	NA	NA	NA	C	coding	1235	3708	9	3716	85.0	-36	True	AATATA	-11
PB.11953.9	chrX	-	3690	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-67	499	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	71.10555533852471	NA	2	NA	TRUE	NA	NA	NA	C	coding	113	342	1003	1344	40.0	NA	False	AATAAA	-24
PB.11953.8	chrX	-	3835	3	novel_in_catalog	BX890604.2	novel	3629	13	NA	NA	-8	499	no_combination_of_known_junctions	FALSE	canonical	1	180	junction_2	973.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	76	231	420	650	40.0	NA	False	AATAAA	-24
PB.11953.7	chrX	-	3995	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	912	499	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	456.6269374445621	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1308	1649	40.0	NA	False	AATAAA	-24
PB.11953.6	chrX	-	4076	4	novel_in_catalog	BX890604.2	novel	3629	13	NA	NA	-14	499	no_combination_of_known_junctions	FALSE	canonical	1	10	junction_1	73.14521325570267	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	426	656	40.0	NA	False	AATAAA	-24
PB.11953.5	chrX	-	4286	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-40	499	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	445.10565037977216	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1599	1940	40.0	NA	False	AATAAA	-24
PB.11953.4	chrX	-	4357	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-22	499	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	84.00571409136404	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	1670	2011	40.0	NA	False	AATAAA	-24
PB.11953.3	chrX	-	4328	6	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-17	503	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	445.10565037977216	NA	0	NA	TRUE	NA	NA	NA	C	coding	76	231	429	659	40.0	NA	False	AATAAA	-28
PB.11953.2	chrX	-	2367	7	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	10	-34	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1749.7043321658662	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1610	1951	85.0	NA	False	NA	NA
PB.11953.1	chrX	-	2447	7	novel_not_in_catalog	BX890604.2	novel	3629	13	NA	NA	-42	-34	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	1776.4231618620604	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	1690	2031	85.0	NA	False	NA	NA
PB.11700.22	chr9	+	2866	16	full-splice_match	SLC44A1	ENST00000374720.7	10511	16	17	7628	17	-6300	multi-exon	FALSE	canonical	1	136759	junction_1	124645.70141360228	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	231	2204	70.0	-12	True	NA	NA
PB.7052.45	chr2	-	6745	44	novel_not_in_catalog	TRIP12	novel	9874	41	NA	NA	-2	226	any annotated donor/acceptor	FALSE	canonical	0	0	junction_42	302287.2830761041	NA	0	NA	TRUE	NA	NA	NA	C	coding	2038	6117	290	6406	15.0	-7	True	AATAAA	-16
PB.9594.5	chr5	-	3563	13	novel_not_in_catalog	CLINT1	novel	3987	12	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	454	junction_2	353165.55352797674	NA	29	NA	TRUE	NA	NA	NA	C	coding	114	345	1862	2206	20.0	-31	True	ATTAAA	-16
PB.866.1	chr1	-	4062	12	full-splice_match	ARHGAP30	ENST00000368013.7	4394	12	337	-5	58	3	multi-exon	FALSE	canonical	1	276777	junction_1	48181.20122332271	NA	1	NA	TRUE	NA	NA	NA	C	coding	953	2862	429	3290	20.0	6873	False	AATAAA	-19
PB.12333.2	chrX	-	2048	5	novel_not_in_catalog	U52111.1	novel	914	3	NA	NA	-2	-26	any annotated donor/acceptor	FALSE	canonical	1	9137	junction_3	923.6084126944709	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-8289	False	NA	NA
PB.12333.1	chrX	-	3033	6	novel_not_in_catalog	U52111.1	novel	914	3	NA	NA	-2	2190	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	4198.474837366541	NA	3	1	TRUE	NA	NA	NA	B	coding	125	378	2573	2950	25.0	-8289	False	NA	NA
PB.11520.2	chr9	-	3129	9	novel_in_catalog	FAM214B	novel	2566	10	NA	NA	-15	-27	intron_retention	FALSE	canonical	1	100648	junction_6	46210.862132017995	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	461	2077	80.0	-1	True	AAAACA	-32
PB.9295.1	chr5	-	2873	21	full-splice_match	GFM2	ENST00000296805.7	3249	21	316	60	6	-6	multi-exon	FALSE	canonical	1	207162	junction_20	58108.04336750636	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	143	2482	50.0	13	True	AATAAA	-13
PB.11101.9	chr8	+	4487	22	full-splice_match	ADAM9	ENST00000487273.6	3839	22	-42	-606	-42	463	multi-exon	FALSE	canonical	1	478626	junction_1	220440.27360426018	NA	4	NA	TRUE	NA	NA	NA	C	coding	819	2460	121	2580	25.0	-29	True	AATAAA	-15
PB.11790.19	chr9	+	3062	16	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-5	0	intron_retention	FALSE	canonical	1	3576	junction_3	81598.06557957664	NA	1	1	TRUE	NA	NA	NA	C	coding	964	2892	169	3060	80.0	-2	True	NA	NA
PB.3189.3	chr13	-	2262	4	novel_not_in_catalog	MZT1	novel	2299	3	NA	NA	81	-12	any annotated donor/acceptor	FALSE	canonical	1	6464	junction_1	240607.70426752523	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	12	True	AATAAA	-14
PB.2110.1	chr11	+	1132	6	full-splice_match	AIP	ENST00000279146.7	1221	6	87	2	79	-2	multi-exon	FALSE	canonical	1	882238	junction_2	157691.81670892122	NA	1	NA	TRUE	NA	NA	NA	A	coding	330	993	32	1024	10.0	-7	True	TATAAA	-17
PB.3189.1	chr13	-	2229	3	full-splice_match	MZT1	ENST00000377818.3	2299	3	69	1	69	-1	multi-exon	FALSE	canonical	1	187176	junction_1	164886.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-25
PB.3742.3	chr15	+	2938	11	novel_not_in_catalog	FAN1	novel	2738	4	NA	NA	-7	-3763	any annotated donor/acceptor	FALSE	canonical	1	6727	junction_1	50488.584327548735	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	185	2896	15.0	0	True	ATTAAA	-21
PB.3742.2	chr15	+	4909	15	novel_in_catalog	FAN1	novel	2738	4	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	30927	junction_1	38017.842116617845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	315	3365	30.0	0	True	AATAAA	-23
PB.3742.1	chr15	+	4969	15	novel_in_catalog	FAN1	novel	2738	4	NA	NA	-190	-9	intron_retention	FALSE	canonical	1	12357	junction_1	41500.123148575585	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	382	3432	45.0	-253	False	AATAAA	-16
PB.11621.17	chr9	-	2596	8	novel_not_in_catalog	UBQLN1	novel	4118	11	NA	NA	-38	-5666	any annotated donor/acceptor	FALSE	canonical	1	19273	junction_1	403948.1132089383	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	294	1643	25.0	-29	True	AATAAA	-21
PB.3742.7	chr15	+	4853	15	full-splice_match	FAN1	ENST00000362065.8	4891	15	29	9	9	-9	multi-exon	FALSE	canonical	1	53418	junction_1	34223.35069004906	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	266	3316	45.0	-13	True	AATAAA	-16
PB.3742.6	chr15	+	4551	11	novel_not_in_catalog	FAN1	novel	2738	4	NA	NA	2	-2238	any annotated donor/acceptor	FALSE	canonical	1	11033	junction_10	42541.42346102208	NA	2	1	TRUE	NA	NA	NA	C	coding	903	2712	273	2984	35.0	-20	True	AATAAA	-15
PB.3742.5	chr15	+	2681	4	full-splice_match	FAN1	ENST00000565466.5	2304	4	-7	-370	-6	-2	multi-exon	FALSE	canonical	1	53418	junction_1	42161.69623669754	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	282	1880	35.0	-29	True	AATAAA	-29
PB.3742.4	chr15	+	2577	4	novel_not_in_catalog	FAN1	novel	2738	4	NA	NA	-7	-9	any annotated donor/acceptor	FALSE	canonical	1	6727	junction_1	63943.09773193316	NA	2	1	TRUE	NA	NA	NA	C	coding	532	1599	185	1783	40.0	0	True	AATAAA	-22
PB.8351.2	chr3	+	1795	17	full-splice_match	PDIA5	ENST00000316218.11	1799	17	3	1	3	0	multi-exon	FALSE	canonical	1	222493	junction_1	66097.14173082203	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	93	1652	15.0	-3	True	AATAAA	-13
PB.8351.3	chr3	+	2990	1	novel_in_catalog	PDIA5	novel	1651	16	NA	NA	30	-36753	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	224	535	90.0	24	True	NA	NA
PB.3742.9	chr15	+	7250	13	novel_in_catalog	FAN1	novel	2738	4	NA	NA	4	-9	intron_retention	FALSE	canonical	1	22564	junction_3	45465.7502045954	NA	7	NA	TRUE	NA	NA	NA	C	coding	485	1458	252	1709	45.0	1	True	AATAAA	-16
PB.3742.8	chr15	+	4557	11	novel_not_in_catalog	FAN1	novel	2738	4	NA	NA	9	-2238	any annotated donor/acceptor	FALSE	canonical	1	11033	junction_10	46009.98834383682	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	279	2990	35.0	-13	True	AATAAA	-15
PB.8220.9	chr3	-	4065	17	full-splice_match	TMF1	ENST00000398559.6	6849	17	-29	2813	1	437	multi-exon	FALSE	canonical	1	257124	junction_16	48029.93029868036	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	247	3528	45.0	0	True	ATTAAA	-36
PB.11101.4	chr8	+	3802	22	novel_not_in_catalog	ADAM9	novel	2053	5	NA	NA	-53	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	307921.3526681883	NA	7	1	TRUE	NA	NA	NA	C	coding	789	2370	132	2501	10.0	-40	True	NA	NA
PB.178.4	chr1	+	3817	6	full-splice_match	CLIC4	ENST00000374379.8	4346	6	89	440	37	-383	multi-exon	FALSE	canonical	1	583	junction_4	645729.9126468899	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	109	870	40.0	-1	True	AGTAAA	-11
PB.9895.2	chr6	-	2572	6	novel_in_catalog	AGPAT1	novel	2103	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	513438	junction_5	258061.40033441654	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	997	1509	5.0	-45	True	AATAAA	-12
PB.1280.4	chr10	-	1685	7	full-splice_match	IL15RA	ENST00000397255.7	759	7	-54	-872	-24	-2	multi-exon	FALSE	canonical	1	19484	junction_6	50289.76951185555	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	55	813	45.0	-4	True	AATAAA	-13
PB.10302.3	chr6	+	7428	27	full-splice_match	SYNJ2	ENST00000355585.8	7378	27	-53	3	-53	-3	multi-exon	FALSE	canonical	1	87269	junction_23	32550.92838321923	NA	2	NA	TRUE	NA	NA	NA	C	coding	1496	4491	129	4619	20.0	-40	True	ATTAAA	-18
PB.1280.2	chr10	-	1660	6	full-splice_match	IL15RA	ENST00000530685.5	660	6	-119	-881	0	7	multi-exon	FALSE	canonical	1	19484	junction_5	58013.39463744558	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	15	779	55.0	-7	True	AATAAA	-22
PB.1280.3	chr10	-	1644	7	full-splice_match	IL15RA	ENST00000379977.7	1626	7	-26	8	-5	7	multi-exon	FALSE	canonical	1	19484	junction_6	45527.35467612362	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	20	928	55.0	-12	True	AATAAA	-22
PB.1280.1	chr10	-	1481	6	full-splice_match	IL15RA	ENST00000528354.5	1037	6	-23	-421	-23	0	multi-exon	FALSE	canonical	1	19484	junction_5	53905.16405095156	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	54	758	50.0	-3	True	AATAAA	-29
PB.4689.4	chr17	-	2468	4	novel_in_catalog	CHRNE	novel	2455	12	NA	NA	-11	-1	intron_retention	TRUE	canonical	1	2681	junction_3	3815.9528298971413	NA	1	NA	TRUE	NA	NA	NA	B	coding	179	540	850	1389	45.0	1268	False	ATTAAA	-11
PB.7847.4	chr22	-	2996	13	novel_not_in_catalog	TTLL12	novel	3385	14	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	198557.92153508592	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	109	1611	5.0	-1	True	AATAAA	-15
PB.11377.11	chr8	-	1968	12	novel_in_catalog	NAPRT	novel	454	2	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	312934	junction_1	114860.92596392063	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	33	1058	10.0	-21	True	GGGGCT	-35
PB.7847.6	chr22	-	2280	14	novel_not_in_catalog	TTLL12	novel	3385	14	NA	NA	1	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	246768.27742746982	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	107	1609	5.0	1	True	AATAAA	-15
PB.7847.1	chr22	-	2636	15	novel_not_in_catalog	TTLL12	novel	3385	14	NA	NA	36	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	198278.36911153627	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	29	1963	0.0	36	True	AATAAA	-17
PB.4689.1	chr17	-	3111	10	novel_in_catalog	CHRNE	novel	2455	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	4826	junction_9	2975.7327015562255	NA	2	1	TRUE	NA	NA	NA	B	coding	182	549	1602	2150	45.0	-1	True	ATTAAA	-11
PB.4689.2	chr17	-	2528	13	novel_not_in_catalog	CHRNE	novel	2455	12	NA	NA	-220	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	3765.881248312125	NA	1	NA	TRUE	NA	NA	NA	B	coding	493	1482	86	1567	45.0	-221	False	ATTAAA	-11
PB.7847.2	chr22	-	3378	14	full-splice_match	TTLL12	ENST00000216129.6	3385	14	6	1	6	0	multi-exon	FALSE	canonical	1	329717	junction_13	128544.96123018062	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	59	1993	5.0	6	True	AATAAA	-15
PB.7956.2	chr3	-	3994	5	novel_in_catalog	MRPS25	novel	823	2	NA	NA	3	56	combination_of_known_junctions	FALSE	canonical	1	71460	junction_1	327717.25628085254	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	121	642	45.0	-63	True	NA	NA
PB.7956.3	chr3	-	3481	5	novel_in_catalog	MRPS25	novel	823	2	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	7147	junction_1	354831.60190037685	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	84	605	20.0	-26	True	ACTAAA	-36
PB.9895.1	chr6	-	2533	7	full-splice_match	AGPAT1	ENST00000395499.5	2496	7	-38	1	-38	-1	multi-exon	FALSE	canonical	1	28090	junction_6	400965.069230233	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	619	1470	5.0	-42	True	AATAAA	-12
PB.7956.6	chr3	-	1750	4	full-splice_match	MRPS25	ENST00000253686.6	4586	4	-11	2847	-11	352	multi-exon	FALSE	canonical	1	689156	junction_3	89803.660248344	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	153	674	65.0	-95	False	NA	NA
PB.7956.4	chr3	-	4548	4	full-splice_match	MRPS25	ENST00000253686.6	4586	4	43	-5	8	5	multi-exon	FALSE	canonical	1	689156	junction_3	89803.660248344	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	99	620	35.0	-41	True	AATAAA	-20
PB.7956.5	chr3	-	2237	4	full-splice_match	MRPS25	ENST00000253686.6	4586	4	27	2322	3	877	multi-exon	FALSE	canonical	1	689156	junction_3	89803.660248344	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	115	636	25.0	-57	True	ATTAAA	-22
PB.11348.10	chr8	-	2486	10	full-splice_match	ST3GAL1	ENST00000522652.5	2580	10	-36	130	2	-130	multi-exon	FALSE	canonical	1	80173	junction_8	48943.78422937236	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	775	1797	75.0	1	True	NA	NA
PB.11101.1	chr8	+	3826	22	full-splice_match	ADAM9	ENST00000487273.6	3839	22	13	0	13	0	multi-exon	FALSE	canonical	1	478626	junction_1	220440.27360426018	NA	1	NA	TRUE	NA	NA	NA	C	coding	819	2460	66	2525	10.0	-543	False	NA	NA
PB.10385.20	chr7	-	1468	8	incomplete-splice_match	RNF216	ENST00000425013.6	5639	17	27	105340	-23	4143	3prime_fragment	FALSE	canonical	1	194313	junction_5	56428.31638423375	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1269	199	1467	70.0	16	False	ATTAAA	-32
PB.5794.1	chr19	-	4502	12	novel_in_catalog	AKAP8	novel	3670	14	NA	NA	-23	-9	intron_retention	FALSE	canonical	1	185469	junction_11	85564.37508451345	NA	19	1	TRUE	NA	NA	NA	C	coding	241	726	2392	3117	30.0	7	False	AATAAA	-8
PB.5794.2	chr19	-	3555	14	full-splice_match	AKAP8	ENST00000269701.6	3670	14	-30	145	-24	-9	multi-exon	FALSE	canonical	1	96171	junction_10	101883.2385214629	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	92	2170	30.0	6	False	AATAAA	-8
PB.5794.3	chr19	-	3043	14	full-splice_match	AKAP8	ENST00000269701.6	3670	14	-20	647	-14	-511	multi-exon	FALSE	canonical	1	96171	junction_10	101883.2385214629	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	82	2160	80.0	2	True	NA	NA
PB.5794.4	chr19	-	2416	14	full-splice_match	AKAP8	ENST00000269701.6	3670	14	6	1248	-5	-1112	multi-exon	FALSE	canonical	1	96171	junction_10	101883.2385214629	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	56	2134	30.0	-2	True	AATAAA	-15
PB.5794.5	chr19	-	2607	15	novel_in_catalog	AKAP8	novel	3670	14	NA	NA	-17	-1108	combination_of_known_junctions	FALSE	canonical	1	56250	junction_7	129957.3321464882	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	85	1179	25.0	-1	True	AATAAA	-19
PB.5794.6	chr19	-	2423	13	novel_in_catalog	AKAP8	novel	3670	14	NA	NA	-30	-1108	no_combination_of_known_junctions	FALSE	canonical	1	7660	junction_12	129609.93603402116	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	98	2137	25.0	0	True	AATAAA	-19
PB.8045.1	chr3	+	3114	13	incomplete-splice_match	NKTR	ENST00000232978.12	7343	17	44	10067	-2	448	3prime_fragment	FALSE	canonical	1	52212	junction_6	168105.80769009408	NA	1	NA	TRUE	NA	NA	NA	B	coding	990	2970	145	3114	65.0	-31	True	NA	NA
PB.4094.4	chr15	-	1793	4	novel_in_catalog	LINC01579	novel	3480	7	NA	NA	-5	995	no_combination_of_known_junctions	FALSE	canonical	1	5643	junction_1	303.85340032471066	NA	0	NA	TRUE	NA	NA	NA	B	coding	119	360	1	360	20.0	-6	False	AATAAA	-15
PB.5846.3	chr19	+	1855	6	novel_in_catalog	KXD1	novel	1592	6	NA	NA	0	-4	intron_retention	FALSE	canonical	1	4372	junction_1	595506.9041774075	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	582	1112	35.0	-1196	False	AATAAA	-23
PB.5846.1	chr19	+	2547	5	novel_in_catalog	KXD1	novel	1592	6	NA	NA	0	-4	intron_retention	FALSE	canonical	1	736	junction_1	540296.8270281508	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	1274	1804	35.0	0	True	AATAAA	-23
PB.5846.6	chr19	+	1336	5	full-splice_match	KXD1	ENST00000222307.8	1426	5	82	8	-6	-8	multi-exon	FALSE	canonical	1	760363	junction_1	215191.04882696678	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	67	597	40.0	-9	True	AATAAA	-19
PB.4094.1	chr15	-	4803	4	novel_in_catalog	LINC01579	novel	3480	7	NA	NA	0	4068	no_combination_of_known_junctions	FALSE	canonical	1	567	junction_1	2689.133482906508	NA	0	NA	TRUE	NA	NA	NA	B	coding	117	354	2	355	30.0	-1	True	NA	NA
PB.4094.2	chr15	-	3231	1	novel_in_catalog	LINC01579	novel	3480	7	NA	NA	7826	4068	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.5846.5	chr19	+	1596	7	novel_not_in_catalog	KXD1	novel	1592	6	NA	NA	-15	-4	intron_retention	FALSE	canonical	1	212	junction_1	613296.442645466	NA	1	1	TRUE	NA	NA	NA	C	coding	176	531	323	853	35.0	15	True	AATAAA	-23
PB.5846.8	chr19	+	1365	5	full-splice_match	KXD1	ENST00000539106.5	1496	5	118	13	1	-4	multi-exon	FALSE	canonical	1	8230	junction_1	537066.8050412234	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	92	622	35.0	1	True	AATAAA	-23
PB.5846.9	chr19	+	2384	6	novel_in_catalog	KXD1	novel	1592	6	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	736	junction_1	593449.4609040942	NA	6	NA	TRUE	NA	NA	NA	C	coding	176	531	1261	1791	35.0	-1110	False	AATAAA	-23
PB.504.9	chr1	-	2902	15	novel_not_in_catalog	MCOLN2	novel	2871	14	NA	NA	-24	-1	any annotated donor/acceptor	FALSE	canonical	1	152	junction_14	29513.958544376652	NA	12	1	TRUE	NA	NA	NA	C	coding	538	1617	185	1801	25.0	-2	True	AATAAA	-18
PB.10293.8	chr6	+	5250	20	full-splice_match	SCAF8	ENST00000367178.7	5057	20	109	-302	56	118	multi-exon	FALSE	canonical	1	163340	junction_2	65474.60340364244	NA	0	NA	TRUE	NA	NA	NA	C	coding	1271	3816	468	4283	40.0	-891	False	NA	NA
PB.10293.7	chr6	+	4620	21	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	35	-6	combination_of_known_junctions	FALSE	canonical	1	1742	junction_1	90394.57243712146	NA	1	NA	TRUE	NA	NA	NA	C	coding	1271	3816	146	3961	35.0	-3	True	AATAAA	-12
PB.10293.6	chr6	+	4811	19	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	29	-2	intron_retention	FALSE	canonical	1	4912	junction_3	91566.57447931828	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	495	4148	30.0	-9	True	AATAAA	-16
PB.10293.5	chr6	+	4846	18	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	25	-4	intron_retention	FALSE	canonical	1	6760	junction_1	83472.62165462514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1228	3687	499	4185	35.0	-13	True	AATAAA	-14
PB.10293.4	chr6	+	4707	20	full-splice_match	SCAF8	ENST00000367178.7	5057	20	348	2	-180	-2	multi-exon	FALSE	canonical	1	163340	junction_2	65474.60340364244	NA	0	NA	TRUE	NA	NA	NA	C	coding	1271	3816	229	4044	30.0	1	True	AATAAA	-16
PB.10293.3	chr6	+	4695	17	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	16	-2	intron_retention	FALSE	canonical	1	1149	junction_1	86675.91854710497	NA	3	NA	TRUE	NA	NA	NA	C	coding	1174	3525	508	4032	30.0	-931	False	AATAAA	-16
PB.10293.2	chr6	+	5052	21	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	11	-4	intron_retention	TRUE	canonical	1	11299	junction_1	103943.41927289097	NA	1	NA	TRUE	NA	NA	NA	C	coding	1292	3879	513	4391	35.0	-936	False	AATAAA	-14
PB.10293.1	chr6	+	5479	21	novel_in_catalog	SCAF8	novel	5057	20	NA	NA	11	74622	intron_retention	FALSE	canonical	1	30752	junction_20	86032.58820202958	NA	1	NA	TRUE	NA	NA	NA	C	coding	1271	3816	513	4328	20.0	-936	False	AATAAA	-11
PB.8059.2	chr3	+	3173	3	full-splice_match	ZNF502	ENST00000449836.5	3173	3	0	0	0	0	multi-exon	FALSE	canonical	1	2487	junction_1	14474.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	544	1635	162	1796	25.0	-17	True	ATTAAA	-20
PB.7336.1	chr20	+	4761	22	novel_in_catalog	NCOA3	novel	7939	23	NA	NA	-45	114	no_combination_of_known_junctions	FALSE	canonical	1	8401	junction_1	128021.71539661923	NA	2	NA	TRUE	NA	NA	NA	C	coding	1420	4263	183	4445	15.0	-862	False	CATAAA	-16
PB.1238.3	chr1	+	3985	4	novel_in_catalog	DESI2	novel	4208	5	NA	NA	-45	-6	no_combination_of_known_junctions	FALSE	canonical	1	37276	junction_2	112907.52964065573	NA	0	NA	TRUE	NA	NA	NA	C	coding	43	132	257	388	35.0	-113	False	ATTAAA	-13
PB.780.14	chr1	-	6496	15	full-splice_match	ADAR	ENST00000529168.2	6343	15	-16	-137	0	3	multi-exon	FALSE	canonical	1	223198	junction_8	383959.7746140518	NA	1	NA	TRUE	NA	NA	NA	C	coding	1200	3603	181	3783	85.0	-1	True	AATATA	-11
PB.609.9	chr1	+	2050	3	incomplete-splice_match	CEPT1	ENST00000357172.8	2198	9	17	24150	17	-18	3prime_fragment	FALSE	canonical	1	216626	junction_1	18743.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	139	660	90.0	-4	True	NA	NA
PB.8244.11	chr3	-	4395	4	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	151	-4	any annotated donor/acceptor	FALSE	canonical	1	6672	junction_3	237978.1820032155	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	435	938	50.0	205	False	AATAAA	-19
PB.8244.10	chr3	-	4433	4	full-splice_match	CGGBP1	ENST00000462901.5	1063	4	40	-3410	-30	-4	multi-exon	FALSE	canonical	1	11576	junction_3	236795.02696401562	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	473	976	50.0	24	False	AATAAA	-19
PB.448.2	chr1	-	2739	1	novel_in_catalog	LINC01739	novel	490	2	NA	NA	34	3715	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	NA	False	NA	NA
PB.609.3	chr1	+	2147	9	novel_in_catalog	CEPT1	novel	1957	9	NA	NA	150	0	intron_retention	FALSE	canonical	1	16723	junction_1	127284.05673310974	NA	2	NA	TRUE	NA	NA	NA	C	coding	416	1251	105	1355	10.0	-2	True	AATAAA	-21
PB.448.1	chr1	-	2789	1	novel_in_catalog	LINC01739	novel	573	2	NA	NA	35	3837	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.609.5	chr1	+	2046	9	full-splice_match	CEPT1	ENST00000357172.8	2198	9	39	113	39	1	multi-exon	FALSE	canonical	1	216626	junction_1	79458.13082441202	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	117	1367	15.0	-5462	False	AATAAA	-19
PB.8244.13	chr3	-	4275	3	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	-539	-4	any annotated donor/acceptor	FALSE	canonical	1	1106	junction_2	1723.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	315	818	50.0	-555	False	AATAAA	-19
PB.609.7	chr1	+	2232	10	novel_not_in_catalog	CEPT1	novel	1957	9	NA	NA	-3	0	intron_retention	FALSE	canonical	1	26205	junction_4	140418.91711360696	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	970	1554	20.0	-24	True	AATAAA	-18
PB.609.6	chr1	+	3108	4	incomplete-splice_match	CEPT1	ENST00000357172.8	2198	9	-15	21497	-15	2409	3prime_fragment	FALSE	canonical	1	216626	junction_1	60303.400257918016	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	171	803	80.0	-36	True	NA	NA
PB.8244.12	chr3	-	4371	3	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	341	-4	any annotated donor/acceptor	FALSE	canonical	1	510	junction_2	258056.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	167	504	411	914	50.0	463	False	AATAAA	-19
PB.8244.15	chr3	-	4380	3	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	269	-117	any annotated donor/acceptor	FALSE	canonical	1	8231	junction_2	254196.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	533	1036	10.0	-10	True	ATTAAA	-15
PB.6910.59	chr2	-	2800	24	full-splice_match	STAT1	ENST00000392323.6	2723	24	25	-102	-4	-3	multi-exon	FALSE	canonical	1	32434	junction_21	483829.15754109557	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2145	388	2532	35.0	-13	True	AATAAA	-14
PB.7111.40	chr2	-	3056	19	incomplete-splice_match	HDLBP	ENST00000391975.5	6372	28	58	12062	3	485	3prime_fragment	FALSE	canonical	1	545798	junction_18	709444.2935758671	NA	9	1	TRUE	NA	NA	NA	C	coding	898	2697	171	2867	65.0	5	True	NA	NA
PB.8244.14	chr3	-	4216	3	full-splice_match	CGGBP1	ENST00000309534.10	4495	3	93	186	-10	-118	multi-exon	FALSE	canonical	1	516623	junction_1	26365.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	167	504	370	873	15.0	-1	True	ATTAAA	-14
PB.9613.6	chr5	-	2147	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-28	-83	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	5	NA	TRUE	NA	NA	NA	B	coding	267	804	236	1039	40.0	-5	True	AATACA	-18
PB.9613.7	chr5	-	1989	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-8	-221	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	3	NA	TRUE	NA	NA	NA	B	coding	267	804	216	1019	25.0	9779	False	AATGAA	-19
PB.9613.4	chr5	-	2392	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	3	NA	TRUE	NA	NA	NA	B	coding	267	804	183	986	25.0	-17	True	ATTAAA	-16
PB.9613.5	chr5	-	2297	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	1	96	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	4	NA	TRUE	NA	NA	NA	B	coding	267	804	207	1010	45.0	9788	False	ACTAAA	-37
PB.9613.2	chr5	-	4028	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-11	-214	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	11	NA	TRUE	NA	NA	NA	B	coding	267	804	185	988	10.0	-19	True	AATAAA	-15
PB.9613.3	chr5	-	2859	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-11	-48	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	6	NA	TRUE	NA	NA	NA	B	coding	267	804	185	988	55.0	-19	True	ATTAAA	-30
PB.8271.7	chr3	+	2303	4	novel_not_in_catalog	PCNP	novel	2342	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	299	junction_2	193047.75097944608	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	6	True	AATAAA	-13
PB.9613.1	chr5	-	4328	19	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-61	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	138874.7427001317	NA	3	NA	TRUE	NA	NA	NA	B	coding	267	804	269	1072	25.0	-4	True	ATTAAA	-18
PB.8271.9	chr3	+	2059	3	novel_in_catalog	PCNP	novel	2342	5	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	7227	junction_2	223458.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	14	True	AATAAA	-14
PB.8271.8	chr3	+	2091	5	novel_not_in_catalog	PCNP	novel	2342	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	23129	junction_2	169716.89478069058	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	14	True	AATAAA	-14
PB.9613.8	chr5	-	1831	18	novel_not_in_catalog	LCP2	novel	4678	21	NA	NA	-11	-2258	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	142174.0414950809	NA	4	NA	TRUE	NA	NA	NA	B	coding	267	804	185	988	20.0	-19	True	AATAAA	-21
PB.1158.9	chr1	+	2462	4	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	6	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	127089.65188488882	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	17	True	AATAAA	-10
PB.8150.1	chr3	-	1538	15	full-splice_match	RRP9	ENST00000232888.6	1578	15	40	0	40	0	multi-exon	FALSE	canonical	1	150304	junction_14	96045.10300586993	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	35	1462	5.0	1	True	ATTAAA	-17
PB.9941.1	chr6	+	4453	21	full-splice_match	UHRF1BP1	ENST00000192788.5	9570	21	-63	5180	2	-5180	multi-exon	FALSE	canonical	1	70601	junction_8	23817.758897721673	NA	1	NA	TRUE	NA	NA	NA	C	coding	1406	4218	235	4452	60.0	-6598	False	NA	NA
PB.9941.2	chr6	+	9583	21	full-splice_match	UHRF1BP1	ENST00000192788.5	9570	21	-15	2	-15	-2	multi-exon	FALSE	canonical	1	70601	junction_8	23817.758897721673	NA	2	NA	TRUE	NA	NA	NA	C	coding	1440	4323	187	4509	25.0	-31	True	ATTAAA	-14
PB.9941.3	chr6	+	1875	1	novel_in_catalog	UHRF1BP1	novel	4706	22	NA	NA	-31	-83591	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-6566	False	NA	NA
PB.9941.4	chr6	+	4804	21	full-splice_match	UHRF1BP1	ENST00000192788.5	9570	21	-34	4800	31	-4800	multi-exon	FALSE	canonical	1	70601	junction_8	23817.758897721673	NA	2	NA	TRUE	NA	NA	NA	C	coding	1440	4323	206	4528	20.0	-6569	False	TATAAA	-17
PB.9941.5	chr6	+	5531	21	full-splice_match	UHRF1BP1	ENST00000192788.5	9570	21	-17	4056	-17	-4056	multi-exon	FALSE	canonical	1	70601	junction_8	23817.758897721673	NA	4	1	TRUE	NA	NA	NA	C	coding	1440	4323	189	4511	15.0	-33	True	CATAAA	-22
PB.9941.6	chr6	+	5964	21	full-splice_match	UHRF1BP1	ENST00000192788.5	9570	21	18	3588	18	-3588	multi-exon	FALSE	canonical	1	70601	junction_8	23817.758897721673	NA	1	NA	TRUE	NA	NA	NA	C	coding	1440	4323	154	4476	60.0	2	True	NA	NA
PB.5689.3	chr19	-	1943	4	full-splice_match	FBXL12	ENST00000589626.5	1920	4	-28	5	-4	-1	multi-exon	FALSE	canonical	1	27348	junction_2	55763.384840672006	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	513	1319	30.0	-30	True	ATTAAA	-24
PB.5689.2	chr19	-	1623	3	full-splice_match	FBXL12	ENST00000247977.8	1852	3	227	2	1	-2	multi-exon	FALSE	canonical	1	125652	junction_1	13513.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	16	996	30.0	-10	True	ATTAAA	-27
PB.5689.1	chr19	-	1824	2	full-splice_match	FBXL12	ENST00000586469.1	544	2	4	-1284	4	1	multi-exon	FALSE	canonical	1	6225	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	373	1194	30.0	-22	True	ATTAAA	-30
PB.5689.4	chr19	-	1869	3	full-splice_match	FBXL12	ENST00000588922.5	1843	3	-27	1	0	-1	multi-exon	FALSE	canonical	1	59608	junction_2	33022.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	424	1245	30.0	-26	True	ATTAAA	-24
PB.11625.13	chr9	-	2779	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	4	20	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	218	1606	15.0	-14	True	AATAAA	-21
PB.6320.24	chr2	+	2916	3	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	4039	-5	any annotated donor/acceptor	FALSE	canonical	1	29	junction_1	145476.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	207	624	358	981	35.0	3991	False	AATAAA	-17
PB.9368.28	chr5	+	3487	25	novel_in_catalog	PAM	novel	570	2	NA	NA	-3	-91	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	229946.86885247115	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	412	3132	15.0	6	True	NA	NA
PB.9368.29	chr5	+	3790	25	novel_in_catalog	PAM	novel	570	2	NA	NA	8	-7	combination_of_known_junctions	FALSE	canonical	1	70607	junction_24	241273.70568487095	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	401	3268	30.0	17	True	AATAAA	-14
PB.6320.21	chr2	+	3723	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	452	-6	any annotated donor/acceptor	FALSE	canonical	1	3859	junction_1	142554.50136234445	NA	8	NA	TRUE	NA	NA	NA	C	coding	343	1032	758	1789	30.0	-899	False	AATAAA	-16
PB.6320.20	chr2	+	2747	3	full-splice_match	TRIB2	ENST00000155926.8	4391	3	320	1324	274	-1324	multi-exon	FALSE	canonical	1	290981	junction_2	14270.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	1100	2131	35.0	-1077	False	AATAAA	-22
PB.9368.24	chr5	+	3693	15	novel_in_catalog	PAM	novel	570	2	NA	NA	-7	1394	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	185869.18558229468	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	416	1927	75.0	2	True	NA	NA
PB.9368.25	chr5	+	4246	15	novel_in_catalog	PAM	novel	570	2	NA	NA	-5	1949	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	185869.18558229468	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	414	1925	25.0	4	True	AATAAA	-19
PB.9368.26	chr5	+	2175	17	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-5	-15106	any annotated donor/acceptor	FALSE	canonical	1	436	junction_16	249095.6403265292	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	414	2036	15.0	4	True	AGTAAA	-25
PB.9368.27	chr5	+	3783	25	novel_in_catalog	PAM	novel	570	2	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	229946.86885247115	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	413	3133	20.0	5	True	AATAAA	-17
PB.9368.20	chr5	+	3465	15	novel_in_catalog	PAM	novel	570	2	NA	NA	-9	1164	combination_of_known_junctions	FALSE	canonical	1	240365	junction_1	185869.18558229468	NA	2	NA	TRUE	NA	NA	NA	C	coding	503	1512	418	1929	30.0	0	True	AATAAA	-21
PB.9368.21	chr5	+	3673	25	novel_in_catalog	PAM	novel	570	2	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	1	236448	junction_14	247336.8833869635	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	417	3020	15.0	1	True	AATAAA	-20
PB.9368.22	chr5	+	3609	24	novel_in_catalog	PAM	novel	570	2	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	17704	junction_3	294821.7303894185	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	953	2962	20.0	1	True	AATAAA	-14
PB.9368.23	chr5	+	3839	26	novel_not_in_catalog	PAM	novel	570	2	NA	NA	-7	1	any annotated donor/acceptor	FALSE	canonical	1	17650	junction_15	299124.0712856122	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	416	3190	15.0	2	True	AATAAA	-16
PB.4693.5	chr17	-	2029	3	novel_not_in_catalog	PFN1	novel	1291	3	NA	NA	451	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	2803342.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	1472	1786	25.0	-1	True	AATAAA	-13
PB.4693.4	chr17	-	2183	3	novel_not_in_catalog	PFN1	novel	1291	3	NA	NA	484	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	2803342.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	1626	1940	25.0	-1	True	AATAAA	-13
PB.9926.3	chr6	-	2342	7	novel_not_in_catalog	DAXX	novel	2606	8	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	324210.8162701478	NA	4	1	TRUE	NA	NA	NA	C	coding	647	1944	146	2089	10.0	4	True	AATAAA	-24
PB.9926.2	chr6	-	2711	7	novel_in_catalog	DAXX	novel	2606	8	NA	NA	-1	0	intron_retention	FALSE	canonical	1	324458	junction_6	279525.5237248768	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	150	1472	10.0	0	True	AATAAA	-24
PB.4693.1	chr17	-	1228	3	full-splice_match	PFN1	ENST00000225655.5	1291	3	58	5	58	-5	multi-exon	FALSE	canonical	1	5606685	junction_1	5457495.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	140	423	563	985	25.0	-1	True	AATAAA	-13
PB.9926.4	chr6	-	2235	8	novel_not_in_catalog	DAXX	novel	2606	8	NA	NA	-7	0	intron_retention	FALSE	canonical	1	4934	junction_6	374937.24073214806	NA	2	NA	TRUE	NA	NA	NA	C	coding	632	1899	153	2051	10.0	-6	True	AATAAA	-24
PB.9926.7	chr6	-	2325	8	novel_not_in_catalog	DAXX	novel	2606	8	NA	NA	3	-67	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	342474.042347678	NA	5	1	TRUE	NA	NA	NA	C	coding	647	1944	143	2086	80.0	4	True	NA	NA
PB.4693.2	chr17	-	2877	1	novel_in_catalog	PFN1	novel	1291	3	NA	NA	482	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	145	438	1689	2126	20.0	-3	True	AATAAA	-14
PB.942.11	chr1	+	2943	17	full-splice_match	DARS2	ENST00000649689.1	3332	17	268	121	-19	21	multi-exon	FALSE	canonical	1	198591	junction_7	42916.41355220161	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	290	2227	50.0	-3	True	NA	NA
PB.9926.8	chr6	-	2226	7	full-splice_match	DAXX	ENST00000414083.6	2355	7	62	67	3	-67	multi-exon	FALSE	canonical	1	2405	junction_6	356751.5685023917	NA	5	1	TRUE	NA	NA	NA	C	coding	665	1998	112	2109	80.0	4	True	NA	NA
PB.942.13	chr1	+	2511	17	full-splice_match	DARS2	ENST00000649689.1	3332	17	162	659	-8	10	multi-exon	FALSE	canonical	1	198591	junction_7	42916.41355220161	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	396	2333	20.0	-140	False	GATAAA	-19
PB.942.12	chr1	+	3668	17	full-splice_match	DARS2	ENST00000649689.1	3332	17	-16	-320	4	54	multi-exon	FALSE	canonical	1	198591	junction_7	42916.41355220161	NA	4	NA	TRUE	NA	NA	NA	C	coding	645	1938	574	2511	85.0	-16	True	NA	NA
PB.942.15	chr1	+	2660	13	novel_in_catalog	DARS2	novel	3441	17	NA	NA	-2	14	combination_of_known_junctions	FALSE	canonical	1	236	junction_11	92774.19481682243	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	560	1951	55.0	-2	True	NA	NA
PB.942.14	chr1	+	4112	16	incomplete-splice_match	DARS2	ENST00000649689.1	3332	17	-2	-2	-2	2	intron_retention	FALSE	canonical	1	198591	junction_7	40669.751535781754	NA	2	NA	TRUE	NA	NA	NA	C	coding	590	1773	560	2332	10.0	-2	True	ATTAAA	-39
PB.942.17	chr1	+	3101	16	novel_in_catalog	DARS2	novel	3441	17	NA	NA	1	14	no_combination_of_known_junctions	FALSE	canonical	1	4059	junction_3	84612.20943139485	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	557	2392	55.0	1	True	NA	NA
PB.942.16	chr1	+	2461	15	novel_in_catalog	DARS2	novel	3441	17	NA	NA	-2	12	no_combination_of_known_junctions	FALSE	canonical	1	1631	junction_11	89907.92645077837	NA	2	NA	TRUE	NA	NA	NA	C	coding	573	1722	560	2281	25.0	-2	True	GATAAA	-21
PB.6573.2	chr2	-	2080	8	novel_in_catalog	AUP1	novel	1581	12	NA	NA	-3	-1	intron_retention	TRUE	canonical	1	1153914	junction_7	406949.75407095184	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	1498	1929	5.0	9	True	ATTAAA	-22
PB.947.2	chr1	-	5202	20	novel_in_catalog	RC3H1	novel	10988	19	NA	NA	-53	1112	combination_of_known_junctions	FALSE	canonical	1	42506	junction_3	31746.63924787356	NA	0	NA	TRUE	NA	NA	NA	B	coding	1124	3375	406	3780	10.0	3	True	AGTAAA	-13
PB.947.3	chr1	-	4123	20	novel_in_catalog	RC3H1	novel	10988	19	NA	NA	-86	-3	combination_of_known_junctions	FALSE	canonical	1	42506	junction_3	33058.529802009645	NA	0	NA	TRUE	NA	NA	NA	B	coding	1125	3378	439	3816	70.0	-30	True	AATGAA	-42
PB.483.8	chr1	-	4388	15	novel_in_catalog	AC118549.1	novel	4500	11	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	81174	junction_14	95498.1102783704	NA	30	NA	TRUE	NA	NA	NA	C	coding	902	2709	544	3252	20.0	-5	True	AATAAA	-29
PB.11447.2	chr9	-	1242	1	incomplete-splice_match	KIAA2026	ENST00000399933.7	6988	8	38359	49179	-1347	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	384	1152	90	1241	80.0	-989	False	ACTAAA	-8
PB.11157.1	chr8	-	2750	3	novel_not_in_catalog	AC090136.3	novel	2704	2	NA	NA	-19	0	any annotated donor/acceptor	FALSE	canonical	1	235	junction_2	347.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	116	351	468	818	35.0	-4675	False	ATTAAA	-19
PB.6573.1	chr2	-	2718	4	novel_in_catalog	AUP1	novel	1581	12	NA	NA	2	-1	intron_retention	FALSE	canonical	1	1153914	junction_3	519370.4127911879	NA	0	NA	TRUE	NA	NA	NA	C	coding	81	246	350	595	5.0	2	True	ATTAAA	-22
PB.6910.56	chr2	-	2677	23	full-splice_match	STAT1	ENST00000392322.7	2716	23	7	32	7	-32	multi-exon	FALSE	canonical	1	957747	junction_22	256526.92373309852	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	300	2438	70.0	-2	True	TATAAA	-25
PB.8582.6	chr3	-	5022	12	novel_in_catalog	ETV5	novel	4111	13	NA	NA	-8	-7	intron_retention	FALSE	canonical	1	44807	junction_11	69643.86295590938	NA	2	NA	TRUE	NA	NA	NA	C	coding	429	1290	1409	2698	15.0	-1	True	AATAAA	-26
PB.856.1	chr1	+	2916	1	antisense	novelGene_SLAMF1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	NA	False	NA	NA
PB.8265.2	chr3	+	1759	4	full-splice_match	LNP1	ENST00000383693.7	2210	4	348	103	9	28	multi-exon	FALSE	canonical	1	46797	junction_1	9897.125284085723	NA	2	NA	TRUE	NA	NA	NA	C	coding	178	537	933	1469	50.0	-6	True	AATAAA	-38
PB.8265.3	chr3	+	2221	1	novel_in_catalog	LNP1	novel	2210	4	NA	NA	9133	-43224	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	9114	False	AATAAA	-22
PB.788.3	chr1	+	3957	2	full-splice_match	CKS1B	ENST00000471245.1	1166	2	-2618	-173	-2	-1	multi-exon	FALSE	canonical	1	753	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	ATTAAA	-19
PB.8265.1	chr3	+	1828	4	full-splice_match	LNP1	ENST00000383693.7	2210	4	383	-1	-35	1	multi-exon	FALSE	canonical	1	46797	junction_1	9897.125284085723	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	898	1434	15.0	-54	False	AATAAA	-16
PB.2071.1	chr11	-	1210	10	full-splice_match	FIBP	ENST00000357519.8	1248	10	38	0	9	0	multi-exon	FALSE	canonical	1	695790	junction_9	298635.59767530876	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	84	1157	5.0	-31	True	AATAAA	-18
PB.788.4	chr1	+	2333	3	full-splice_match	CKS1B	ENST00000308987.5	759	3	-18	-1556	-2	1556	multi-exon	FALSE	canonical	1	753	junction_2	36193.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.2071.2	chr11	-	2380	9	novel_in_catalog	FIBP	novel	982	5	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	695790	junction_8	315696.75935735286	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	1705	2328	10.0	-25	True	AATAAA	-17
PB.8757.5	chr4	+	3295	18	novel_not_in_catalog	SLC30A9	novel	6218	18	NA	NA	10	-3068	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	158194.2222530993	NA	4	1	TRUE	NA	NA	NA	C	coding	591	1776	141	1916	40.0	-18	True	AATAAA	-16
PB.6828.9	chr2	+	2167	11	novel_not_in_catalog	GORASP2	novel	812	7	NA	NA	-1	-214	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	499070.4335084979	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	86	1300	15.0	-16	True	AATAAA	-14
PB.1531.1	chr10	+	1779	13	incomplete-splice_match	KIF20B	ENST00000478929.1	4900	20	15453	728	15453	-728	5prime_fragment	FALSE	canonical	1	185556	junction_9	24833.91918268686	NA	0	NA	TRUE	NA	NA	NA	B	coding	512	1539	78	1616	25.0	NA	False	AATAAA	-14
PB.1531.2	chr10	+	2502	13	incomplete-splice_match	KIF20B	ENST00000478929.1	4900	20	15456	2	15456	-2	5prime_fragment	FALSE	canonical	1	185556	junction_9	24833.91918268686	NA	0	NA	TRUE	NA	NA	NA	B	coding	512	1539	75	1613	0.0	NA	False	NA	NA
PB.1238.2	chr1	+	3476	1	novel_in_catalog	DESI2	novel	4208	5	NA	NA	-55	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-16
PB.6942.11	chr2	+	2497	10	novel_not_in_catalog	CFLAR	novel	14672	10	NA	NA	0	-4954	intron_retention	FALSE	canonical	0	0	junction_9	231972.72424719823	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	538	1980	30.0	0	True	AATAAA	-15
PB.780.17	chr1	-	6363	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	393258.00414806	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	855	3650	85.0	-7	True	AATATA	-11
PB.11634.1	chr9	-	2639	1	antisense	novelGene_DAPK1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.6828.5	chr2	+	2037	10	full-splice_match	GORASP2	ENST00000234160.4	3173	10	688	448	17	58	multi-exon	FALSE	canonical	1	538771	junction_1	388851.98049903865	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	128	1486	20.0	-58	True	NA	NA
PB.6828.4	chr2	+	2375	11	full-splice_match	GORASP2	ENST00000442798.5	1976	11	-108	-291	16	-215	multi-exon	FALSE	canonical	1	2553	junction_1	569773.692715134	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	251	1591	10.0	-59	True	AATAAA	-13
PB.10143.22	chr6	-	1606	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	-9	2870	-5	100	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	96	1100	20.0	-28	True	AATATA	-13
PB.483.5	chr1	-	6369	15	full-splice_match	AC118549.1	ENST00000370801.7	4328	15	0	-2041	0	-43	multi-exon	TRUE	canonical	1	44319	junction_14	93926.72738942166	NA	1	NA	TRUE	NA	NA	NA	C	coding	903	2712	477	3188	25.0	-1	True	AATAAA	-38
PB.10143.20	chr6	-	2395	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	5	2067	5	903	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	82	1086	50.0	-14	True	TATAAA	-32
PB.9954.1	chr6	-	1722	8	full-splice_match	ETV7	ENST00000340181.8	1719	8	-4	1	-4	0	multi-exon	TRUE	canonical	1	20027	junction_7	6290.860568624737	NA	1	NA	TRUE	NA	NA	NA	A	coding	341	1026	247	1272	10.0	6	True	AATAAA	-15
PB.6528.3	chr2	+	2414	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	12	1765	12	641	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	240	1787	25.0	-6	True	GATAAA	-16
PB.6910.54	chr2	-	3229	23	full-splice_match	STAT1	ENST00000392322.7	2716	23	10	-523	10	523	multi-exon	FALSE	canonical	1	957747	junction_22	256526.92373309852	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	297	2435	50.0	1	True	AATAAA	-29
PB.3879.16	chr15	-	5567	3	full-splice_match	ARPP19	ENST00000561650.5	3245	3	-31	-2291	-31	8	multi-exon	FALSE	canonical	1	6414	junction_2	139927.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	339	False	AATAAA	-22
PB.957.8	chr1	+	7383	19	full-splice_match	RALGPS2	ENST00000367634.6	7512	19	121	8	103	-8	multi-exon	FALSE	canonical	1	105634	junction_14	35017.54892114016	NA	3	NA	TRUE	NA	NA	NA	C	coding	557	1674	236	1909	40.0	-6035	False	AATAAA	-7
PB.3879.10	chr15	-	2613	4	novel_not_in_catalog	ARPP19	novel	5362	4	NA	NA	-12	12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	239977.19741305054	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	136	474	20.0	-1	True	AATAAA	-26
PB.3879.11	chr15	-	5048	3	full-splice_match	ARPP19	ENST00000563277.5	955	3	42	-4135	0	12	multi-exon	FALSE	canonical	1	43258	junction_2	121505.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	96	291	56	346	20.0	35	False	AATAAA	-26
PB.3879.12	chr15	-	5160	5	incomplete-splice_match	ARPP19	ENST00000561971.1	799	6	716	-4577	0	12	5prime_fragment	FALSE	canonical	1	78474	junction_3	92640.12178046831	NA	3	NA	TRUE	NA	NA	NA	C	coding	131	396	63	458	20.0	35	False	AATAAA	-26
PB.957.3	chr1	+	5582	18	novel_in_catalog	RALGPS2	novel	7512	19	NA	NA	79	-3	no_combination_of_known_junctions	FALSE	canonical	1	17521	junction_17	43566.63270412886	NA	4	NA	TRUE	NA	NA	NA	C	coding	525	1578	260	1837	20.0	0	True	AGTAAA	-18
PB.957.2	chr1	+	5755	20	full-splice_match	RALGPS2	ENST00000367635.7	5834	20	77	2	77	-2	multi-exon	FALSE	canonical	1	53078	junction_14	46106.064651769295	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	262	2013	15.0	-2	True	AGTAAA	-19
PB.957.1	chr1	+	5695	19	full-splice_match	RALGPS2	ENST00000367634.6	7512	19	76	1741	58	-3	multi-exon	FALSE	canonical	1	105634	junction_14	35017.54892114016	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	281	1954	20.0	-6080	False	AGTAAA	-18
PB.3879.18	chr15	-	5069	4	novel_not_in_catalog	ARPP19	novel	5362	4	NA	NA	5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	239977.19741305054	NA	30	NA	TRUE	NA	NA	NA	C	coding	112	339	44	382	30.0	-4	True	AATAAA	-11
PB.957.6	chr1	+	5533	18	novel_in_catalog	RALGPS2	novel	7512	19	NA	NA	93	-3	no_combination_of_known_junctions	FALSE	canonical	1	13077	junction_7	51927.99071211906	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	812	1792	20.0	14	True	AGTAAA	-18
PB.957.5	chr1	+	3948	19	full-splice_match	RALGPS2	ENST00000367634.6	7512	19	103	3461	85	-1723	multi-exon	FALSE	canonical	1	105634	junction_14	35017.54892114016	NA	5	NA	TRUE	NA	NA	NA	C	coding	557	1674	254	1927	20.0	6	True	AAAAAG	-14
PB.957.4	chr1	+	5454	17	novel_in_catalog	RALGPS2	novel	7512	19	NA	NA	79	-3	no_combination_of_known_junctions	FALSE	canonical	1	2383	junction_6	54902.870380905406	NA	25	1	TRUE	NA	NA	NA	C	coding	326	981	733	1713	20.0	0	True	AGTAAA	-18
PB.4486.5	chr16	-	3679	21	novel_in_catalog	FHOD1	novel	735	2	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	21282	junction_5	115289.2372192218	NA	0	NA	TRUE	NA	NA	NA	C	coding	1110	3333	102	3434	20.0	9	True	AATAAA	-18
PB.4486.4	chr16	-	3864	23	novel_in_catalog	FHOD1	novel	735	2	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	13129	junction_11	121810.15930721194	NA	3	NA	TRUE	NA	NA	NA	C	coding	695	2088	1532	3619	20.0	10	True	AATAAA	-18
PB.4486.6	chr16	-	3935	22	novel_in_catalog	FHOD1	novel	735	2	NA	NA	-36	-5	intron_retention	FALSE	canonical	1	13129	junction_11	123656.29636851586	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	1608	3695	25.0	6	True	AATAAA	-13
PB.4486.1	chr16	-	3809	22	novel_not_in_catalog	FHOD1	novel	735	2	NA	NA	72	-1	any annotated donor/acceptor	FALSE	canonical	1	12266	junction_5	113600.09554713174	NA	0	NA	TRUE	NA	NA	NA	C	coding	1128	3387	177	3563	15.0	-66	False	AATAAA	-19
PB.4486.3	chr16	-	3710	22	full-splice_match	FHOD1	ENST00000258201.8	3990	22	277	3	83	-1	multi-exon	FALSE	canonical	1	144745	junction_21	96989.21498050774	NA	1	1	TRUE	NA	NA	NA	C	coding	1071	3216	251	3466	15.0	139	False	AATAAA	-17
PB.4486.2	chr16	-	3970	21	novel_in_catalog	FHOD1	novel	735	2	NA	NA	90	0	intron_retention	FALSE	canonical	1	144745	junction_20	97166.98076274419	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	792	3725	20.0	-48	False	AATAAA	-18
PB.6910.53	chr2	-	2850	24	incomplete-splice_match	STAT1	ENST00000361099.7	4310	25	92	5480	10	1023	3prime_fragment	FALSE	canonical	1	957747	junction_23	255440.71553318566	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	297	2672	30.0	1	True	NA	NA
PB.2365.1	chr11	+	3465	1	intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.2365.2	chr11	+	3967	1	intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	2	True	AATAAA	-21
PB.11516.14	chr9	-	3178	17	novel_in_catalog	VCP	novel	4370	17	NA	NA	37	306	combination_of_known_junctions	FALSE	canonical	1	11056	junction_16	858223.5960032479	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	340	2625	10.0	-1	True	AATAAA	-17
PB.11516.17	chr9	-	3345	17	novel_not_in_catalog	VCP	novel	4370	17	NA	NA	-5	299	any annotated donor/acceptor	FALSE	canonical	1	241	junction_16	860459.1691985503	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	514	2799	30.0	-8	True	AATAAA	-10
PB.6392.8	chr2	+	5362	16	novel_in_catalog	CLIP4	novel	2322	15	NA	NA	79	-7	combination_of_known_junctions	FALSE	canonical	1	26193	junction_15	70708.54612455901	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	177	1976	25.0	22	True	AATAAA	-23
PB.2224.5	chr11	+	2337	11	full-splice_match	MED17	ENST00000639189.1	3235	11	-11	909	0	-7	multi-exon	FALSE	canonical	1	24335	junction_7	86191.71296296414	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	233	1393	55.0	0	True	AATAAA	-12
PB.2224.4	chr11	+	2362	11	full-splice_match	MED17	ENST00000639724.1	2317	11	-25	-20	0	-7	multi-exon	FALSE	canonical	1	9806	junction_10	88195.88911786082	NA	3	NA	TRUE	NA	NA	NA	C	coding	652	1959	233	2191	55.0	0	True	AATAAA	-12
PB.6392.5	chr2	+	4209	16	full-splice_match	CLIP4	ENST00000320081.9	4293	16	77	7	77	-7	multi-exon	FALSE	canonical	1	58150	junction_1	57176.06582105254	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	179	2296	25.0	20	True	AATAAA	-23
PB.2224.6	chr11	+	2597	11	full-splice_match	MED17	ENST00000640804.1	2627	11	66	-36	0	-7	multi-exon	FALSE	canonical	1	174389	junction_7	51239.3437183772	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1478	2263	55.0	11	True	AATAAA	-12
PB.2224.1	chr11	+	3478	12	full-splice_match	MED17	ENST00000251871.8	5142	12	37	1627	1	29	multi-exon	FALSE	canonical	1	174389	junction_8	50539.882878003526	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	251	2206	20.0	-110	False	ATTAAA	-29
PB.6392.2	chr2	+	4957	17	novel_not_in_catalog	CLIP4	novel	2322	15	NA	NA	25	-7	any annotated donor/acceptor	FALSE	canonical	1	7261	junction_15	81795.54151654217	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	231	2129	25.0	-32	True	AATAAA	-23
PB.2224.3	chr11	+	2190	12	full-splice_match	MED17	ENST00000251871.8	5142	12	386	2566	35	-8	multi-exon	FALSE	canonical	1	174389	junction_8	50539.882878003526	NA	5	1	TRUE	NA	NA	NA	C	coding	616	1851	7	1857	55.0	239	False	AATAAA	-11
PB.2224.2	chr11	+	2712	13	full-splice_match	MED17	ENST00000638487.1	3622	13	40	870	0	-7	multi-exon	FALSE	canonical	1	13475	junction_6	97472.24856803972	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	1233	2378	55.0	0	True	AATAAA	-12
PB.2551.2	chr12	-	2194	4	full-splice_match	YAF2	ENST00000534854.6	2076	4	-123	5	-22	-5	multi-exon	FALSE	canonical	1	168604	junction_3	51626.99953189868	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	312	734	15.0	-41	True	NA	NA
PB.2551.3	chr12	-	1999	4	full-splice_match	YAF2	ENST00000534854.6	2076	4	3	74	3	-74	multi-exon	FALSE	canonical	1	168604	junction_3	51626.99953189868	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	66	608	25.0	-1	True	AATAAA	-13
PB.2551.1	chr12	-	4093	4	full-splice_match	YAF2	ENST00000534854.6	2076	4	-1	-2016	-1	-4	multi-exon	FALSE	canonical	1	168604	junction_3	51626.99953189868	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	70	612	25.0	-5	True	NA	NA
PB.465.50	chr1	-	1962	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-14	1534	-1	-187	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	101	1327	50.0	1	True	NA	NA
PB.1496.1	chr10	-	2489	1	full-splice_match	AL132656.4	ENST00000623504.1	2122	1	921	-1288	921	1288	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.8065.1	chr3	-	5969	9	full-splice_match	CDCP1	ENST00000296129.5	6006	9	36	1	36	-1	multi-exon	FALSE	canonical	1	107641	junction_8	30803.055377825345	NA	3	1	TRUE	NA	NA	NA	C	coding	836	2511	100	2610	20.0	-9	True	AATAAA	-23
PB.8065.2	chr3	-	5765	9	full-splice_match	CDCP1	ENST00000296129.5	6006	9	-5	246	-5	-246	multi-exon	FALSE	canonical	1	107641	junction_8	30803.055377825345	NA	2	NA	TRUE	NA	NA	NA	C	coding	836	2511	141	2651	55.0	15	False	AATAAA	-11
PB.8065.3	chr3	-	3160	9	full-splice_match	CDCP1	ENST00000296129.5	6006	9	15	2831	15	-2831	multi-exon	FALSE	canonical	1	107641	junction_8	30803.055377825345	NA	1	NA	TRUE	NA	NA	NA	C	coding	836	2511	121	2631	10.0	-30	True	NA	NA
PB.8065.4	chr3	-	2254	8	incomplete-splice_match	CDCP1	ENST00000296129.5	6006	9	-46	6784	-46	-6784	3prime_fragment	FALSE	canonical	1	107641	junction_7	29729.622936713873	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2073	182	2254	50.0	-26	False	NA	NA
PB.8065.5	chr3	-	2025	8	novel_not_in_catalog	CDCP1	novel	6006	9	NA	NA	-1	-6784	any annotated donor/acceptor	FALSE	canonical	1	2056	junction_7	62547.00153141978	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1875	151	2025	50.0	19	False	NA	NA
PB.4023.4	chr15	+	1456	6	full-splice_match	ZFAND6	ENST00000559835.5	1446	6	-10	0	4	0	multi-exon	FALSE	canonical	1	16765	junction_1	268669.035538225	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	98	724	70.0	4	True	NA	NA
PB.7452.8	chr21	-	3021	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-16	-12683	any annotated donor/acceptor	FALSE	canonical	1	1176	junction_1	32327.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	243	732	332	1063	65.0	-27	False	NA	NA
PB.4023.2	chr15	+	1510	6	full-splice_match	ZFAND6	ENST00000558494.5	1472	6	-38	0	0	0	multi-exon	FALSE	canonical	1	261991	junction_3	186416.32875432348	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	152	778	70.0	0	True	NA	NA
PB.4023.3	chr15	+	1582	7	novel_not_in_catalog	ZFAND6	novel	1729	7	NA	NA	207	0	any annotated donor/acceptor	FALSE	canonical	1	11636	junction_1	258609.61075705726	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	224	850	70.0	-12	True	NA	NA
PB.4023.1	chr15	+	1670	7	full-splice_match	ZFAND6	ENST00000261749.10	1814	7	111	33	3	0	multi-exon	FALSE	canonical	1	55278	junction_1	248224.74928742612	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	312	938	70.0	3	True	NA	NA
PB.7452.2	chr21	-	1431	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-16	-8015	any annotated donor/acceptor	FALSE	canonical	1	44010	junction_1	10910.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-27	False	AATAAA	-26
PB.7452.1	chr21	-	1610	4	full-splice_match	TEKT4P2	ENST00000416067.5	1599	4	-10	-1	-10	1	multi-exon	FALSE	canonical	1	23595	junction_2	51444.21946795059	NA	1	NA	TRUE	NA	NA	NA	C	coding	129	390	83	472	10.0	-21	False	AATAAA	-17
PB.7452.7	chr21	-	3477	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-11	-12222	any annotated donor/acceptor	FALSE	canonical	1	1176	junction_1	32327.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	243	732	327	1058	40.0	-22	False	ATTAAA	-16
PB.7452.5	chr21	-	3879	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-11	-11820	any annotated donor/acceptor	FALSE	canonical	1	1176	junction_1	32327.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	243	732	327	1058	20.0	-22	False	ATTAAA	-21
PB.7452.4	chr21	-	4873	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-7	-10822	any annotated donor/acceptor	FALSE	canonical	1	1176	junction_1	32327.0	NA	9	NA	TRUE	NA	NA	NA	C	coding	243	732	323	1054	25.0	-18	False	TATAAA	-24
PB.12212.1	chrX	+	1989	6	full-splice_match	PRPS1	ENST00000372418.3	1414	6	-20	-555	5	-1	multi-exon	FALSE	canonical	1	4581	junction_2	276384.34732770233	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	140	997	20.0	-25	True	AATAAA	-17
PB.12212.2	chrX	+	2075	7	full-splice_match	PRPS1	ENST00000372435.9	2152	7	76	1	-6	0	multi-exon	FALSE	canonical	1	344295	junction_3	155726.36227976586	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	126	1082	20.0	-11	True	AATAAA	-18
PB.12212.3	chrX	+	4754	6	novel_in_catalog	PRPS1	novel	1748	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	344295	junction_3	165996.19553519893	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	120	659	20.0	-5	True	AATAAA	-17
PB.7833.1	chr22	-	1071	3	full-splice_match	NDUFA6	ENST00000617763.1	1183	3	112	0	112	0	multi-exon	FALSE	canonical	1	2443412	junction_2	453468.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	128	387	29	415	10.0	-1	True	AATAAA	-24
PB.4158.1	chr16	+	1434	6	full-splice_match	NUBP2	ENST00000565134.5	815	6	-47	-572	4	2	multi-exon	FALSE	canonical	1	338397	junction_1	233989.7609594061	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	62	817	20.0	-39	True	ATTAAA	-24
PB.4158.3	chr16	+	2248	4	novel_in_catalog	NUBP2	novel	1413	7	NA	NA	0	2	intron_retention	FALSE	canonical	1	338397	junction_1	260944.0838072402	NA	0	NA	TRUE	NA	NA	NA	C	coding	62	189	335	523	20.0	-31	True	ATTAAA	-24
PB.4158.2	chr16	+	1352	7	full-splice_match	NUBP2	ENST00000262302.13	1413	7	60	1	5	-1	multi-exon	FALSE	canonical	1	338397	junction_1	246291.5628216665	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	61	876	15.0	-38	True	ATTAAA	-29
PB.279.1	chr1	-	4780	21	full-splice_match	KIAA0319L	ENST00000325722.7	4789	21	8	1	0	-1	multi-exon	TRUE	canonical	1	122800	junction_20	80586.38742467614	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	228	3377	5.0	-3	True	ATTAAA	-19
PB.6910.50	chr2	-	2909	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	92	1309	10	-52	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	297	2549	35.0	1	True	CATAAA	-18
PB.787.12	chr1	-	2943	12	novel_in_catalog	PYGO2	novel	594	3	NA	NA	-10573	-2661	no_combination_of_known_junctions	FALSE	canonical	1	11258	junction_11	456929.1218125774	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	183	1439	15.0	20	False	ATTAAA	-16
PB.2379.6	chr11	-	1285	7	full-splice_match	THYN1	ENST00000341541.7	1299	7	7	7	7	2	multi-exon	FALSE	canonical	1	706519	junction_1	190895.46619783534	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	456	1133	35.0	0	True	AATAAA	-11
PB.2379.4	chr11	-	976	8	full-splice_match	THYN1	ENST00000392595.6	893	8	-89	6	7	3	multi-exon	FALSE	canonical	1	305837	junction_7	273141.4369216664	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	146	823	40.0	0	True	AATAAA	-12
PB.2379.5	chr11	-	2831	6	incomplete-splice_match	THYN1	ENST00000341541.7	1299	7	-7	6	-1	3	intron_retention	FALSE	canonical	1	706519	junction_1	192292.6367686501	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	2175	2678	40.0	-14	True	AATAAA	-12
PB.2379.2	chr11	-	5082	1	genic	THYN1	novel	NA	NA	NA	NA	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-13	True	AATAAA	-28
PB.2379.3	chr11	-	3375	4	incomplete-splice_match	THYN1	ENST00000531135.5	926	6	-10	-598	7	4	intron_retention	FALSE	canonical	1	1021032	junction_2	69795.60629437931	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	2187	2519	40.0	-26	True	AATAAA	-13
PB.2379.1	chr11	-	3066	5	novel_in_catalog	THYN1	novel	893	8	NA	NA	7	10	intron_retention	FALSE	canonical	1	706519	junction_1	174759.2535275314	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	2187	2519	40.0	-26	True	AATAAA	-28
PB.8827.25	chr4	-	4067	12	full-splice_match	G3BP2	ENST00000359707.8	4883	12	556	260	-12	-260	multi-exon	FALSE	canonical	1	173938	junction_4	492708.8761422128	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	231	1679	10.0	-3	True	AGTAAA	-20
PB.8827.24	chr4	-	3871	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-12	-1250	-12	-357	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	231	1580	25.0	-3	True	AATAAA	-22
PB.8827.27	chr4	-	3796	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	0	-365	combination_of_known_junctions	FALSE	canonical	1	69621	junction_10	438019.4761726469	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	164	1513	35.0	-1	True	AATAAA	-14
PB.279.5	chr1	-	4341	21	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	1	4851	junction_20	99184.86547113677	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	403	3552	100.0	239	False	NA	NA
PB.7026.4	chr2	+	2232	7	novel_in_catalog	STK16	novel	2868	8	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	66730	junction_1	121222.88729913541	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	1172	1888	20.0	4	True	AATAAA	-18
PB.7026.5	chr2	+	2202	6	novel_in_catalog	STK16	novel	2868	8	NA	NA	13	0	intron_retention	FALSE	canonical	1	66730	junction_1	136724.6284933333	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	379	1020	20.0	25	True	AATAAA	-19
PB.7026.2	chr2	+	2841	8	full-splice_match	STK16	ENST00000409638.7	2868	8	27	0	-1	0	multi-exon	FALSE	canonical	1	109345	junction_1	105320.31175012187	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	146	1063	15.0	-16	True	AATAAA	-15
PB.11939.2	chrX	+	2314	1	genic	LINC00685	novel	NA	NA	NA	NA	-1833	-381	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.11939.1	chrX	+	2177	1	genic	LINC00685	novel	NA	NA	NA	NA	-1849	-534	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.6306.5	chr2	-	2253	6	full-splice_match	YWHAQ	ENST00000238081.7	2208	6	-58	13	-58	-13	multi-exon	FALSE	canonical	1	1410037	junction_5	702487.9131786966	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	215	952	50.0	-104	False	AATAAA	-11
PB.11646.46	chr9	-	2154	15	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-3	1	intron_retention	FALSE	canonical	1	4800	junction_12	522195.0712051572	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	234	1691	40.0	-9	True	AATAAA	-13
PB.1519.1	chr10	-	2596	1	antisense	novelGene_PTEN_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-9518	False	NA	NA
PB.279.7	chr1	-	4009	21	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	28570	junction_20	95179.39027074087	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	71	3220	100.0	-1	True	NA	NA
PB.279.8	chr1	-	4095	21	full-splice_match	KIAA0319L	ENST00000426982.6	3213	21	-22	-860	-22	0	multi-exon	FALSE	canonical	1	11561	junction_20	98040.6861737896	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	157	3306	100.0	-17	False	NA	NA
PB.11621.14	chr9	-	1918	8	novel_in_catalog	UBQLN1	novel	4118	11	NA	NA	-46	20	combination_of_known_junctions	FALSE	canonical	1	14065	junction_7	444022.21559783263	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	302	1540	25.0	263	False	AATAAA	-35
PB.10673.14	chr7	-	5050	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	20	-3605	20	3179	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	465	1445	35.0	-6	True	ATTAAA	-20
PB.12159.1	chrX	-	2725	6	full-splice_match	TAF9B	ENST00000480681.1	734	6	-19	-1972	-19	-1	multi-exon	FALSE	canonical	1	134147	junction_3	50807.96662571727	NA	0	NA	TRUE	NA	NA	NA	C	coding	94	285	31	315	20.0	-1	True	AATAAA	-12
PB.12159.2	chrX	-	2631	7	full-splice_match	TAF9B	ENST00000341864.5	2713	7	80	2	-4	-2	multi-exon	FALSE	canonical	1	134147	junction_3	51634.85263527598	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	31	771	15.0	14	True	AATAAA	-11
PB.6998.25	chr2	-	2384	1	genic	IGFBP5	novel	NA	NA	NA	NA	-24	-14313	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	151	456	775	1230	80.0	-3	True	NA	NA
PB.10673.17	chr7	-	2709	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	-9	-1235	-9	809	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	494	1474	20.0	477	False	CATAAA	-5
PB.9820.6	chr6	+	2273	4	full-splice_match	ZSCAN26	ENST00000316606.10	2362	4	85	4	0	-4	multi-exon	FALSE	canonical	1	41469	junction_2	36595.46012220034	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	138	1172	40.0	0	True	AATAAA	-7
PB.9820.7	chr6	+	2088	4	full-splice_match	ZSCAN26	ENST00000316606.10	2362	4	94	180	-1	-180	multi-exon	FALSE	canonical	1	41469	junction_2	36595.46012220034	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	129	1163	25.0	9	True	NA	NA
PB.12224.1	chrX	-	1965	1	antisense	novelGene_ALG13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	AAAACA	-27
PB.9820.5	chr6	+	2510	4	full-splice_match	ZSCAN26	ENST00000421553.6	2835	4	125	200	-8	-180	multi-exon	FALSE	canonical	1	52018	junction_2	32601.82609745793	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	146	1585	25.0	-8	True	NA	NA
PB.9820.2	chr6	+	2719	4	full-splice_match	ZSCAN26	ENST00000421553.6	2835	4	111	5	-22	-5	multi-exon	FALSE	canonical	1	52018	junction_2	32601.82609745793	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	160	1599	30.0	-22	True	AATAAA	-26
PB.9820.3	chr6	+	3033	3	novel_in_catalog	ZSCAN26	novel	2835	4	NA	NA	-21	0	intron_retention	FALSE	canonical	1	80502	junction_1	25184.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	951	1928	30.0	-21	True	AATAAA	-11
PB.9820.1	chr6	+	2618	5	novel_not_in_catalog	ZSCAN26	novel	2835	4	NA	NA	-27	-4	any annotated donor/acceptor	FALSE	canonical	1	9249	junction_2	44203.90013548013	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	165	1517	40.0	-27	True	AATAAA	-7
PB.9820.8	chr6	+	2898	4	full-splice_match	ZSCAN26	ENST00000619937.4	2729	4	-196	27	10	-4	multi-exon	FALSE	canonical	1	11289	junction_1	49638.81199446883	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	358	1797	40.0	20	True	AATAAA	-7
PB.10673.10	chr7	-	8666	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	25	-7226	25	-2993	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	2	NA	TRUE	NA	NA	NA	C	coding	326	981	460	1440	35.0	-1	True	AATAAA	-27
PB.3611.2	chr14	+	1791	10	novel_in_catalog	PSMC1	novel	4448	11	NA	NA	8	-4	intron_retention	FALSE	canonical	1	68	junction_5	57809.51732870442	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	574	1578	25.0	9	True	AATAAA	-15
PB.3611.3	chr14	+	2223	10	novel_in_catalog	PSMC1	novel	4448	11	NA	NA	10	0	intron_retention	FALSE	canonical	1	68	junction_6	57812.45539919534	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	35	1072	10.0	11	True	AATAAA	-19
PB.3611.1	chr14	+	1300	11	full-splice_match	PSMC1	ENST00000261303.12	4448	11	60	3088	1	-209	multi-exon	FALSE	canonical	1	68	junction_6	55637.1678571079	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1257	44	1300	65.0	2	True	AATGAA	-20
PB.10807.6	chr7	+	2050	11	full-splice_match	ING3	ENST00000431467.1	1447	11	31	-634	31	358	multi-exon	FALSE	canonical	1	140813	junction_4	41765.92542300481	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	35	1246	45.0	-18	True	AATAAA	-7
PB.3611.4	chr14	+	1558	11	full-splice_match	PSMC1	ENST00000261303.12	4448	11	82	2808	-1	-3	multi-exon	FALSE	canonical	1	68	junction_6	55637.1678571079	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	22	1344	20.0	24	False	AATAAA	-16
PB.4162.1	chr16	+	2422	1	novel_in_catalog	NDUFB10	novel	705	4	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	177	534	72	605	5.0	14	True	TATAAA	-14
PB.276.7	chr1	+	4044	11	novel_not_in_catalog	ZMYM1	novel	4608	13	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	6288	junction_10	33426.37219636615	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	134	1579	25.0	-2	True	NA	NA
PB.8305.12	chr3	-	5471	1	full-splice_match	AC108693.1	ENST00000496068.1	432	1	-4970	-69	-4970	69	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	16	True	ATTAAA	-11
PB.10079.5	chr6	-	5756	29	full-splice_match	IBTK	ENST00000306270.11	6054	29	42	256	-41	0	multi-exon	FALSE	canonical	1	141086	junction_28	74919.24746082052	NA	31	3	TRUE	NA	NA	NA	C	coding	1353	4062	509	4570	25.0	31	False	AATAAA	-21
PB.963.10	chr1	-	3528	2	full-splice_match	TOR1AIP2	ENST00000495650.1	888	2	-13	-2627	0	2627	multi-exon	FALSE	canonical	1	33600	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	131	396	790	1185	35.0	-1	True	AATAAA	-21
PB.276.5	chr1	+	3957	9	novel_not_in_catalog	ZMYM1	novel	4608	13	NA	NA	-1	1	any annotated donor/acceptor	FALSE	canonical	1	1594	junction_1	37276.58317710162	NA	3	NA	TRUE	NA	NA	NA	C	coding	1055	3168	192	3359	25.0	-5	True	NA	NA
PB.276.4	chr1	+	4053	11	novel_in_catalog	ZMYM1	novel	4608	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1080	junction_1	31368.410020273583	NA	2	NA	TRUE	NA	NA	NA	C	coding	1193	3582	107	3688	35.0	-6	True	NA	NA
PB.6866.1	chr2	-	3743	1	full-splice_match	TTC30B	ENST00000408939.3	4017	1	229	45	229	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	665	1998	23	2020	40.0	10	True	AGTAAA	-21
PB.9257.8	chr5	+	3918	13	full-splice_match	NLN	ENST00000380985.9	8661	13	143	4600	81	1355	multi-exon	FALSE	canonical	1	123123	junction_1	53629.4396055909	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	36	2150	40.0	53	False	AATAAA	-19
PB.6866.3	chr2	-	2146	1	full-splice_match	TTC30B	ENST00000408939.3	4017	1	220	1651	220	-1651	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	665	1998	32	2029	75.0	1	True	NA	NA
PB.6866.2	chr2	-	2631	1	full-splice_match	TTC30B	ENST00000408939.3	4017	1	222	1164	222	-1164	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	665	1998	30	2027	40.0	3	True	AATGAA	-9
PB.1921.2	chr11	-	6483	43	novel_in_catalog	CKAP5	novel	7121	44	NA	NA	16	6	no_combination_of_known_junctions	FALSE	canonical	1	736	junction_40	229150.71928871435	NA	3	NA	TRUE	NA	NA	NA	C	coding	1963	5892	99	5990	35.0	-3	True	AATAAA	-27
PB.1921.3	chr11	-	6696	44	full-splice_match	CKAP5	ENST00000529230.5	7121	44	-65	490	2	-2	multi-exon	FALSE	canonical	1	318378	junction_43	207752.63031111704	NA	1	NA	TRUE	NA	NA	NA	C	coding	2032	6099	113	6211	25.0	-17	True	AATAAA	-19
PB.1921.1	chr11	-	7450	44	full-splice_match	CKAP5	ENST00000529230.5	7121	44	-49	-280	18	280	multi-exon	TRUE	canonical	1	318378	junction_43	207752.63031111704	NA	2	NA	TRUE	NA	NA	NA	C	coding	2032	6099	97	6195	25.0	-1	True	ATTAAA	-23
PB.11326.2	chr8	-	4697	28	full-splice_match	ATAD2	ENST00000287394.9	5565	28	216	652	130	0	multi-exon	FALSE	canonical	1	251410	junction_27	83051.09982113836	NA	0	NA	TRUE	NA	NA	NA	C	coding	1220	3663	403	4065	15.0	229	False	AATAAA	-14
PB.1921.4	chr11	-	4126	24	novel_not_in_catalog	CKAP5	novel	7121	44	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	275047.62691708887	NA	8	NA	TRUE	NA	NA	NA	C	coding	1171	3516	124	3639	30.0	-28	False	AATAAA	-21
PB.6099.2	chr19	-	1914	8	full-splice_match	SLC1A5	ENST00000542575.6	2882	8	965	3	-287	-1	multi-exon	FALSE	canonical	1	1461091	junction_5	210926.5792171411	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	349	1290	30.0	964	False	AATAAA	-18
PB.1165.3	chr1	-	2202	14	full-splice_match	LIN9	ENST00000460719.5	2909	14	9	698	9	-690	multi-exon	FALSE	canonical	1	31512	junction_11	26539.17523900967	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	25	1548	60.0	0	True	TATAAA	-22
PB.6226.9	chr19	+	6478	10	novel_in_catalog	U2AF2	novel	3022	12	NA	NA	-30	-1	intron_retention	FALSE	canonical	1	1400490	junction_4	393773.6206576089	NA	3	NA	TRUE	NA	NA	NA	C	coding	284	855	4439	5293	10.0	-4	True	ATTAAA	-21
PB.2579.4	chr12	+	2322	10	novel_not_in_catalog	CACNB3	novel	477	3	NA	NA	-100	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	84145.94754236516	NA	1	1	TRUE	NA	NA	NA	B	coding	308	927	354	1280	0.0	4883	False	AATAAA	-15
PB.11398.11	chr8	+	3920	10	novel_in_catalog	HSF1	novel	2105	13	NA	NA	3	0	intron_retention	FALSE	canonical	1	392078	junction_7	336310.91675427184	NA	30	1	TRUE	NA	NA	NA	C	coding	305	918	2501	3418	10.0	3	True	TATAAA	-17
PB.6226.8	chr19	+	1882	13	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-34	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	725908.0046616712	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	75	1490	15.0	-8	True	ATTAAA	-17
PB.10798.1	chr7	+	2986	3	full-splice_match	CAV2	ENST00000222693.4	3301	3	316	-1	-34	1	multi-exon	FALSE	canonical	1	1175875	junction_2	187114.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	77	565	25.0	-32	True	AATAAA	-17
PB.2579.1	chr12	+	2636	12	novel_not_in_catalog	CACNB3	novel	477	3	NA	NA	-51	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	93119.34982031757	NA	1	1	TRUE	NA	NA	NA	B	coding	480	1443	152	1594	0.0	-3260	False	AATAAA	-15
PB.2579.2	chr12	+	2571	12	novel_in_catalog	CACNB3	novel	477	3	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	24446	junction_1	86315.1354546929	NA	1	NA	TRUE	NA	NA	NA	B	coding	308	927	602	1528	0.0	4	True	AATAAA	-16
PB.2579.3	chr12	+	2922	12	novel_not_in_catalog	CACNB3	novel	477	3	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	86852.51225216457	NA	1	1	TRUE	NA	NA	NA	B	coding	481	1446	435	1880	0.0	-3	True	AATAAA	-15
PB.8317.12	chr3	-	1986	8	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	0	-2233	intron_retention	FALSE	canonical	1	9427	junction_5	92247.7086186305	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	356	1738	30.0	-2	True	AGTAAA	-18
PB.8317.13	chr3	-	2069	10	novel_not_in_catalog	TMEM39A	novel	3043	4	NA	NA	10	-2316	intron_retention	FALSE	canonical	1	10381	junction_3	107169.75116395116	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	376	1338	20.0	-22	True	ATTAAA	-20
PB.8317.10	chr3	-	4818	7	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	2	-2233	intron_retention	FALSE	canonical	1	182389	junction_6	50991.81608002297	NA	4	NA	TRUE	NA	NA	NA	C	coding	332	999	420	1418	30.0	1	True	AGTAAA	-18
PB.8317.11	chr3	-	1996	9	full-splice_match	TMEM39A	ENST00000319172.9	4369	9	56	2317	-10	-2317	multi-exon	FALSE	canonical	1	182389	junction_8	46304.497747080415	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	366	1832	15.0	-12	True	ATTAAA	-19
PB.8317.16	chr3	-	1883	9	full-splice_match	TMEM39A	ENST00000319172.9	4369	9	57	2429	-9	-2429	multi-exon	FALSE	canonical	1	182389	junction_8	46304.497747080415	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	365	1831	10.0	-11	True	GATAAA	-18
PB.8317.17	chr3	-	2798	7	novel_not_in_catalog	TMEM39A	novel	3043	4	NA	NA	0	1138	intron_retention	FALSE	canonical	1	10	junction_5	110166.4362221493	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	356	1462	20.0	-2	True	AATAAA	-15
PB.8317.14	chr3	-	3897	8	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	-12	-2326	intron_retention	FALSE	canonical	1	182389	junction_7	47795.87184462435	NA	8	NA	TRUE	NA	NA	NA	C	coding	371	1116	368	1483	35.0	-14	True	ATTAAA	-10
PB.8317.15	chr3	-	2983	9	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	0	-2326	intron_retention	FALSE	canonical	1	18909	junction_2	109932.06625883777	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	405	1403	35.0	-1	True	ATTAAA	-10
PB.287.3	chr1	+	2223	5	incomplete-splice_match	ADPRHL2	ENST00000373178.4	1668	6	18	1	18	-1	intron_retention	FALSE	canonical	1	250876	junction_1	103135.95083280854	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	28	951	10.0	-2	True	AATAAA	-19
PB.287.2	chr1	+	1553	5	novel_in_catalog	ADPRHL2	novel	1668	6	NA	NA	17	-1	no_combination_of_known_junctions	FALSE	canonical	1	9267	junction_1	226035.0757266447	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	379	1008	10.0	-3	True	AATAAA	-19
PB.8317.18	chr3	-	1768	9	novel_not_in_catalog	TMEM39A	novel	3043	4	NA	NA	0	1137	intron_retention	FALSE	canonical	1	812	junction_1	116510.00306277354	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	356	1498	20.0	-2	True	AATAAA	-14
PB.8317.19	chr3	-	2640	5	full-splice_match	TMEM39A	ENST00000468676.5	935	5	36	-1741	-13	1365	multi-exon	FALSE	canonical	1	29504	junction_4	104225.95219132086	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	325	903	75.0	-15	True	NA	NA
PB.10807.5	chr7	+	1198	5	full-splice_match	ING3	ENST00000339121.9	1222	5	17	7	-5	-5	multi-exon	FALSE	canonical	1	67223	junction_4	81855.8169966405	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3	True	CATAAA	-13
PB.9636.14	chr5	-	3541	11	novel_not_in_catalog	RNF44	novel	4155	11	NA	NA	21	-584	any annotated donor/acceptor	FALSE	canonical	1	35692	junction_7	170760.82778951386	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	505	1794	35.0	2	True	ATTAAA	-16
PB.6226.3	chr19	+	2219	13	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-56	0	any annotated donor/acceptor	FALSE	canonical	1	111914	junction_6	851811.8392420784	NA	2	1	TRUE	NA	NA	NA	C	coding	306	921	652	1572	15.0	-30	True	ATTAAA	-22
PB.6226.2	chr19	+	2124	13	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-93	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	725908.0046616712	NA	3	NA	TRUE	NA	NA	NA	C	coding	471	1416	134	1549	15.0	-7307	False	ATTAAA	-22
PB.2730.2	chr12	+	5396	12	full-splice_match	TBC1D30	ENST00000539867.5	2594	12	41	-2843	41	-2401	multi-exon	FALSE	canonical	1	7621	junction_1	12354.74761022647	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	268	2553	15.0	-54	True	CATAAA	-16
PB.2730.1	chr12	+	2748	12	full-splice_match	TBC1D30	ENST00000539867.5	2594	12	90	-244	-5	244	multi-exon	FALSE	canonical	1	7621	junction_1	12354.74761022647	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	219	2504	20.0	-5	True	AATAAA	-19
PB.10807.2	chr7	+	2181	12	full-splice_match	ING3	ENST00000315870.9	3777	12	28	1568	-8	358	multi-exon	FALSE	canonical	1	140813	junction_5	40291.26503534929	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	121	1377	45.0	0	True	AATAAA	-7
PB.1025.7	chr1	-	2854	3	novel_not_in_catalog	ZNF281	novel	4891	2	NA	NA	-21	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	14437.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	170	2566	90.0	-5	True	NA	NA
PB.297.1	chr1	-	2482	16	full-splice_match	GNL2	ENST00000373062.7	2334	16	-28	-120	-14	120	multi-exon	FALSE	canonical	1	402620	junction_8	206885.34981095206	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	128	2323	40.0	-15	True	AATAAA	-15
PB.297.2	chr1	-	2286	16	full-splice_match	GNL2	ENST00000373062.7	2334	16	-15	63	-1	-58	multi-exon	FALSE	canonical	1	402620	junction_8	206885.34981095206	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2172	115	2286	65.0	-2	True	AAAAAG	-37
PB.297.3	chr1	-	2542	16	novel_not_in_catalog	GNL2	novel	635	2	NA	NA	-19	2	any annotated donor/acceptor	FALSE	canonical	1	9557	junction_10	268022.8302742055	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	993	2501	20.0	-20	False	ATTAAA	-20
PB.297.4	chr1	-	2425	17	novel_not_in_catalog	GNL2	novel	635	2	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	119	junction_11	305134.85698887485	NA	4	NA	TRUE	NA	NA	NA	C	coding	502	1509	880	2388	25.0	-5	True	ATTAAA	-16
PB.4766.1	chr17	-	1937	5	full-splice_match	SLC25A35	ENST00000577745.1	1860	5	-82	5	-57	-5	multi-exon	FALSE	canonical	1	29998	junction_3	18423.29506867596	NA	1	NA	TRUE	NA	NA	NA	A	coding	300	903	594	1496	25.0	-1	True	TATAAA	-14
PB.297.6	chr1	-	3282	15	novel_in_catalog	GNL2	novel	635	2	NA	NA	-14	-5	intron_retention	FALSE	canonical	1	402620	junction_8	210408.32741009875	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	1745	3253	50.0	-15	True	ATTAAA	-8
PB.2009.1	chr11	-	3897	1	novel_in_catalog	SNHG1	novel	2768	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-15
PB.297.8	chr1	-	2972	13	novel_not_in_catalog	GNL2	novel	2334	16	NA	NA	-13	-1496	intron_retention	FALSE	canonical	1	1759	junction_9	268977.6997165481	NA	2	1	TRUE	NA	NA	NA	C	coding	407	1221	1751	2971	65.0	-14	True	NA	NA
PB.297.9	chr1	-	2233	15	novel_in_catalog	GNL2	novel	2334	16	NA	NA	-7	-1496	combination_of_known_junctions	FALSE	canonical	1	14934	junction_6	287635.9517439944	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2112	121	2232	65.0	-8	True	NA	NA
PB.892.1	chr1	-	2006	3	novel_not_in_catalog	RGS5	novel	5812	6	NA	NA	4	-4461	any annotated donor/acceptor	FALSE	canonical	1	560	junction_1	29541.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-49	True	ATTAAA	-20
PB.11625.10	chr9	-	2795	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	17	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	811826.2383334457	NA	8	4	TRUE	NA	NA	NA	B	coding	222	669	900	1568	20.0	-17	True	AATAAA	-18
PB.4568.1	chr16	+	2627	5	novel_not_in_catalog	ATMIN	novel	4884	4	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	89716.22808890263	NA	0	NA	TRUE	NA	NA	NA	B	coding	793	2382	42	2423	15.0	-12	True	TATAAA	-35
PB.4568.2	chr16	+	4670	5	novel_not_in_catalog	ATMIN	novel	4884	4	NA	NA	1	-111	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	89716.22808890263	NA	6	NA	TRUE	NA	NA	NA	B	coding	793	2382	24	2405	15.0	6	True	ATTAAA	-16
PB.7183.3	chr20	+	1617	7	full-splice_match	SNRPB2	ENST00000246071.7	2452	7	45	790	0	-3	multi-exon	FALSE	canonical	1	233904	junction_2	282488.3936774611	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	172	849	15.0	0	True	AATAAA	-14
PB.864.1	chr1	-	4609	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-7	-24	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	13	1	TRUE	NA	NA	NA	B	coding	276	831	78	908	50.0	-8	True	AATAAA	-30
PB.641.4	chr1	-	3051	4	full-splice_match	CD58	ENST00000369487.3	892	4	-5	-2154	-5	-402	multi-exon	FALSE	canonical	1	270122	junction_3	82282.50766853319	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	73	795	45.0	-51	True	NA	NA
PB.7517.17	chr21	+	2619	1	novel_in_catalog	TTC3	novel	769	9	NA	NA	1	-17512	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	ATTAAA	-19
PB.7517.16	chr21	+	4129	29	novel_in_catalog	TTC3	novel	769	9	NA	NA	0	-305	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	105066.56299679352	NA	1	NA	TRUE	NA	NA	NA	C	coding	1316	3948	180	4127	45.0	-3	True	NA	NA
PB.7517.15	chr21	+	4185	28	novel_in_catalog	TTC3	novel	769	9	NA	NA	-1	-305	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	106346.61357846652	NA	1	NA	TRUE	NA	NA	NA	C	coding	1298	3894	290	4183	45.0	-4	True	NA	NA
PB.7517.14	chr21	+	3022	26	novel_in_catalog	TTC3	novel	769	9	NA	NA	1	-3	no_combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	96427.83116313258	NA	5	NA	TRUE	NA	NA	NA	C	coding	729	2190	292	2481	75.0	-6	True	NA	NA
PB.7517.13	chr21	+	6861	37	novel_in_catalog	TTC3	novel	769	9	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	103216.47140595784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1715	5148	183	5330	20.0	-6	True	AATAAA	-18
PB.7517.12	chr21	+	2800	24	novel_in_catalog	TTC3	novel	769	9	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	96507.48202464533	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2604	197	2800	75.0	-20	True	NA	NA
PB.7517.11	chr21	+	1592	17	incomplete-splice_match	TTC3	ENST00000540756.5	2025	18	-27	1381	3	-16	3prime_fragment	FALSE	canonical	1	16053	junction_15	96989.3075542834	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1395	197	1591	80.0	-20	True	NA	NA
PB.7517.10	chr21	+	2362	23	incomplete-splice_match	TTC3	ENST00000418766.5	3771	33	-22	17116	3	-3323	3prime_fragment	FALSE	canonical	1	11239	junction_7	87907.61144337703	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2106	257	2362	55.0	1	True	NA	NA
PB.7517.19	chr21	+	4033	27	novel_in_catalog	TTC3	novel	769	9	NA	NA	3	-3245	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	104209.68619678426	NA	1	NA	TRUE	NA	NA	NA	C	coding	1249	3747	286	4032	70.0	0	True	ATTAAA	-8
PB.7517.18	chr21	+	4899	36	novel_not_in_catalog	TTC3	novel	769	9	NA	NA	3	-3245	any annotated donor/acceptor	FALSE	canonical	1	2168	junction_1	101737.65460217284	NA	1	NA	TRUE	NA	NA	NA	C	coding	1581	4743	156	4898	70.0	0	True	ATTAAA	-8
PB.1144.11	chr1	+	2577	17	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	-1717	-175	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	539869.6001377902	NA	3	1	TRUE	NA	NA	NA	B	coding	178	537	465	1001	20.0	-7431	False	AATAAA	-25
PB.1144.10	chr1	+	2934	20	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	465	-173	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	508283.1335550249	NA	7	1	TRUE	NA	NA	NA	B	coding	178	537	820	1356	15.0	-4009	False	AATAAA	-27
PB.8210.2	chr3	+	5151	11	incomplete-splice_match	ATXN7	ENST00000487717.5	3683	12	734	-1796	75	0	5prime_fragment	FALSE	canonical	1	96285	junction_2	27548.51070820345	NA	0	NA	TRUE	NA	NA	NA	B	coding	818	2457	159	2615	75.0	-4	True	AATAGA	-36
PB.11038.15	chr8	-	2756	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	6	288	combination_of_known_junctions	FALSE	canonical	1	10397	junction_9	124533.91845360734	NA	3	NA	TRUE	NA	NA	NA	C	coding	455	1368	231	1598	35.0	5	True	AATAAA	-18
PB.11038.14	chr8	-	2636	13	full-splice_match	ENTPD4	ENST00000417069.6	2063	13	-1	-572	-1	292	multi-exon	FALSE	canonical	1	84479	junction_5	91039.78675873745	NA	2	NA	TRUE	NA	NA	NA	C	coding	608	1827	238	2064	50.0	-2	True	AATAAA	-22
PB.11038.13	chr8	-	2781	14	novel_not_in_catalog	ENTPD4	novel	790	5	NA	NA	-1	292	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	114808.56652062472	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	238	1701	50.0	-2	True	AATAAA	-22
PB.3639.1	chr14	+	3735	4	novel_in_catalog	IFI27	novel	692	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	452315	junction_2	521829.2734646713	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	3217	3567	15.0	-1	True	AATAAA	-21
PB.3639.2	chr14	+	2767	1	novel_in_catalog	IFI27	novel	692	6	NA	NA	0	1308	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	115	348	948	1295	80.0	0	True	NA	NA
PB.3639.3	chr14	+	1906	2	full-splice_match	IFI27	ENST00000557700.1	598	2	0	-1308	0	1308	multi-exon	FALSE	canonical	1	752972	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	87	434	80.0	0	True	NA	NA
PB.8609.18	chr3	-	3055	22	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	-12	239	intron_retention	FALSE	canonical	1	2915	junction_21	92935.78839099001	NA	3	1	TRUE	NA	NA	NA	C	coding	734	2205	318	2522	20.0	0	True	AATATA	-14
PB.4219.2	chr16	+	1255	6	full-splice_match	HMOX2	ENST00000570646.5	2147	6	448	444	-7	2	multi-exon	FALSE	canonical	1	576127	junction_1	147085.70414747993	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	158	1108	15.0	-61	True	AATAAA	-16
PB.4219.1	chr16	+	1704	6	full-splice_match	HMOX2	ENST00000570646.5	2147	6	442	1	-13	0	multi-exon	FALSE	canonical	1	576127	junction_1	147085.70414747993	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	164	1114	5.0	-67	True	AATAAA	-17
PB.8609.19	chr3	-	1693	16	incomplete-splice_match	ACAP2	ENST00000326793.10	7160	23	-12	22491	-12	-3	3prime_fragment	FALSE	canonical	1	161944	junction_6	68863.72423510719	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1449	244	1692	70.0	0	True	TATAAA	-24
PB.9488.4	chr5	-	1741	8	full-splice_match	TMEM173	ENST00000330794.8	1771	8	29	1	-3	-1	multi-exon	FALSE	canonical	1	237893	junction_7	108843.57183947755	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	306	1445	15.0	-4	True	NA	NA
PB.864.3	chr1	-	3639	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	1	-986	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	7	1	TRUE	NA	NA	NA	B	coding	276	831	70	900	25.0	0	True	AATAAA	-16
PB.5082.1	chr17	-	2140	2	full-splice_match	HOXB4	ENST00000332503.5	3757	2	1619	-2	1619	2	multi-exon	FALSE	canonical	1	70530	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	249	750	180	929	15.0	3886	False	AATAAA	-20
PB.4780.1	chr17	+	3096	7	full-splice_match	COX10	ENST00000261643.7	2873	7	-24	-199	9	199	multi-exon	FALSE	canonical	1	92015	junction_6	33889.27060991756	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	102	1433	55.0	-18	True	NA	NA
PB.4780.2	chr17	+	2890	7	full-splice_match	COX10	ENST00000261643.7	2873	7	-22	5	11	-5	multi-exon	FALSE	canonical	1	92015	junction_6	33889.27060991756	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	100	1431	35.0	-16	True	AATAAA	-10
PB.4780.3	chr17	+	2663	6	novel_in_catalog	COX10	novel	875	3	NA	NA	14	4	no_combination_of_known_junctions	FALSE	canonical	1	3146	junction_5	65111.09952811425	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	896	1195	15.0	-13	True	AATAAA	-19
PB.11688.1	chr9	-	2708	13	novel_in_catalog	TEX10	novel	3006	15	NA	NA	-7	2	no_combination_of_known_junctions	FALSE	canonical	1	15615	junction_8	97638.23509613179	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	185	2599	15.0	-22	True	ATTAAA	-20
PB.9144.5	chr5	+	1814	11	novel_not_in_catalog	CCT5	novel	3675	11	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	812	junction_4	1112934.2980400235	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	33	1682	25.0	21	True	AATAAA	-11
PB.11688.2	chr9	-	3018	15	full-splice_match	TEX10	ENST00000374902.8	3074	15	50	6	50	-4	multi-exon	FALSE	canonical	1	131531	junction_14	59511.27661859986	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	128	2917	40.0	3	True	ATTAAA	-12
PB.6589.15	chr2	-	2199	4	full-splice_match	TGOLN2	ENST00000377386.7	6489	4	401	3889	0	-19	multi-exon	FALSE	canonical	1	560082	junction_3	78492.03061599453	NA	4	NA	TRUE	NA	NA	NA	C	coding	437	1314	63	1376	30.0	5769	False	AATAAA	-14
PB.6589.14	chr2	-	2391	4	full-splice_match	TGOLN2	ENST00000377386.7	6489	4	427	3671	-13	199	multi-exon	FALSE	canonical	1	560082	junction_3	78492.03061599453	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	37	1350	25.0	5795	False	AATAGA	-35
PB.11688.4	chr9	-	2855	14	novel_in_catalog	TEX10	novel	3006	15	NA	NA	24	-4	no_combination_of_known_junctions	FALSE	canonical	1	1544	junction_13	89795.57424967225	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	160	2754	40.0	9	True	ATTAAA	-12
PB.3470.1	chr14	+	3971	1	novel_in_catalog	DACT1	novel	612	4	NA	NA	322	-3001	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	103	312	1228	1539	90.0	-8134	False	NA	NA
PB.8355.3	chr3	-	4059	13	full-splice_match	CCDC14	ENST00000409697.7	2962	13	-197	-900	-49	3	multi-exon	FALSE	canonical	1	109845	junction_9	132517.17627349295	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	141	3002	15.0	-23	False	ATTAAA	-18
PB.8315.10	chr3	+	4771	3	incomplete-splice_match	ARHGAP31	ENST00000264245.8	9317	12	107397	2997	76878	-2997	5prime_fragment	FALSE	canonical	1	98689	junction_1	2360.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1065	3198	121	3318	40.0	NA	False	AATAAA	-20
PB.7002.1	chr2	-	2352	8	full-splice_match	AAMP	ENST00000475678.5	2270	8	-79	-3	11	2	multi-exon	FALSE	canonical	1	1191396	junction_7	91782.33631160369	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	82	783	15.0	-31	True	AATAAA	-17
PB.6766.10	chr2	-	2554	7	novel_in_catalog	GTDC1	novel	10514	11	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	1	40221	junction_6	38743.36675017917	NA	0	NA	TRUE	NA	NA	NA	B	coding	292	879	253	1131	20.0	44	True	AATAAA	-19
PB.7002.3	chr2	-	2024	9	novel_in_catalog	AAMP	novel	1886	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	1121059	junction_3	118495.86682553268	NA	3	NA	TRUE	NA	NA	NA	C	coding	347	1044	52	1095	25.0	-1	True	AATAAA	-14
PB.7002.4	chr2	-	1931	10	full-splice_match	AAMP	ENST00000489767.5	1833	10	-45	-53	-16	0	multi-exon	FALSE	canonical	1	1121059	junction_4	115341.02978473215	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	76	1119	25.0	-25	True	AATAAA	-14
PB.7002.5	chr2	-	1797	11	full-splice_match	AAMP	ENST00000248450.8	1886	11	82	7	3	0	multi-exon	FALSE	canonical	1	1121059	junction_5	112649.66375737656	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	90	1394	25.0	9172	False	AATAAA	-14
PB.7002.6	chr2	-	2228	9	novel_in_catalog	AAMP	novel	1886	11	NA	NA	13	-2	intron_retention	FALSE	canonical	1	1121059	junction_4	100112.80371340808	NA	2	NA	TRUE	NA	NA	NA	C	coding	233	702	80	781	30.0	-29	True	AATAAA	-12
PB.6589.13	chr2	-	4714	4	full-splice_match	TGOLN2	ENST00000377386.7	6489	4	438	1337	-2	-1334	multi-exon	FALSE	canonical	1	560082	junction_3	78492.03061599453	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	26	1339	70.0	1	True	NA	NA
PB.3716.1	chr14	+	5448	2	antisense	novelGene_IGHV4-39_AS_novelGene_IGHV3-38_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	30	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	NA	False	NA	NA
PB.6589.12	chr2	-	3968	4	novel_not_in_catalog	TGOLN2	novel	6419	5	NA	NA	581	-1171	any annotated donor/acceptor	FALSE	canonical	1	7252	junction_3	311122.3373801516	NA	1	NA	TRUE	NA	NA	NA	C	coding	92	279	152	430	90.0	6389	False	NA	NA
PB.9274.3	chr5	-	3362	2	intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.8313.12	chr3	-	2358	4	incomplete-splice_match	IGSF11	ENST00000491903.1	1487	7	48	22030	48	1502	3prime_fragment	FALSE	canonical	1	18789	junction_3	5009.092887495255	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	666	99	764	50.0	267	False	AATAAA	-10
PB.4205.1	chr16	+	2531	3	full-splice_match	ZNF174	ENST00000344823.9	1557	3	-46	-928	-37	928	multi-exon	FALSE	canonical	1	32449	junction_2	44920.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	808	1512	80.0	-53	True	NA	NA
PB.4205.2	chr16	+	2819	2	full-splice_match	ZNF174	ENST00000572544.1	1002	2	-774	-1043	-35	958	multi-exon	FALSE	canonical	1	122290	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	249	750	806	1555	20.0	-51	True	NA	NA
PB.4205.3	chr16	+	2445	3	full-splice_match	ZNF174	ENST00000268655.4	2260	3	-193	8	-8	-8	multi-exon	FALSE	canonical	1	74616	junction_2	23837.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	779	2002	45.0	-24	True	AATAAA	-18
PB.11288.4	chr8	+	2202	4	novel_not_in_catalog	CTHRC1	novel	1271	4	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	1	11675	junction_2	195690.85072180105	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	107	550	10.0	1	True	AATAAA	-15
PB.11288.1	chr8	+	2641	4	novel_not_in_catalog	CTHRC1	novel	1271	4	NA	NA	-25	-4	any annotated donor/acceptor	FALSE	canonical	1	11675	junction_2	195690.85072180105	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	168	611	40.0	-1030	False	AATAAA	-20
PB.402.18	chr1	+	2491	21	full-splice_match	OSBPL9	ENST00000531828.5	2210	21	26	-307	1	130	multi-exon	FALSE	canonical	1	130786	junction_1	241312.38016613966	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	469	2184	20.0	-23	True	TATAAA	-19
PB.402.19	chr1	+	3611	21	full-splice_match	OSBPL9	ENST00000531828.5	2210	21	27	-1428	2	748	multi-exon	FALSE	canonical	1	130786	junction_1	241312.38016613966	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	468	2183	25.0	-22	True	CATAAA	-42
PB.402.16	chr1	+	2676	18	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	0	-67	no_combination_of_known_junctions	FALSE	canonical	1	851	junction_2	284608.594890315	NA	1	1	TRUE	NA	NA	NA	C	coding	558	1677	392	2068	40.0	-24	True	ATTAAA	-17
PB.402.17	chr1	+	3460	20	full-splice_match	OSBPL9	ENST00000361556.9	2721	20	19	-758	1	758	multi-exon	FALSE	canonical	1	47348	junction_1	257316.35578903352	NA	2	NA	TRUE	NA	NA	NA	C	coding	626	1881	142	2022	25.0	-23	True	AATACA	-25
PB.6734.1	chr2	+	2493	1	full-splice_match	AC012306.2	ENST00000609350.1	630	1	-266	-1597	-266	1597	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	1571	False	NA	NA
PB.6832.1	chr2	+	4244	4	full-splice_match	CYBRD1	ENST00000321348.8	4365	4	122	-1	-7	1	multi-exon	FALSE	canonical	1	549304	junction_1	46583.50414041434	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	77	937	15.0	-7	True	AATAAA	-19
PB.402.12	chr1	+	2604	19	novel_in_catalog	OSBPL9	novel	3352	26	NA	NA	-3	-67	no_combination_of_known_junctions	FALSE	canonical	1	19509	junction_3	282028.06610532774	NA	4	2	TRUE	NA	NA	NA	C	coding	616	1851	146	1996	40.0	-27	True	ATTAAA	-17
PB.402.13	chr1	+	2708	22	novel_not_in_catalog	OSBPL9	novel	3352	26	NA	NA	-3	-67	any annotated donor/acceptor	FALSE	canonical	1	2895	junction_7	285113.22087474156	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	535	2100	40.0	-27	True	ATTAAA	-17
PB.402.10	chr1	+	2498	23	incomplete-splice_match	OSBPL9	ENST00000371714.5	3352	26	39913	373	0	130	5prime_fragment	FALSE	canonical	1	222333	junction_4	245655.8476926722	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	20	2191	20.0	0	True	TATAAA	-19
PB.402.11	chr1	+	2890	22	novel_not_in_catalog	OSBPL9	novel	3352	26	NA	NA	4	-67	any annotated donor/acceptor	FALSE	canonical	1	472	junction_6	280190.8776880115	NA	6	1	TRUE	NA	NA	NA	C	coding	557	1674	609	2282	40.0	-59	False	ATTAAA	-17
PB.2952.1	chr12	-	4379	2	full-splice_match	SRSF9	ENST00000546942.1	946	2	36	-3469	36	-2	multi-exon	FALSE	canonical	1	990598	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	74	451	10.0	-10	True	AATATA	-20
PB.6047.7	chr19	-	3876	10	novel_in_catalog	ZNF45	novel	3898	10	NA	NA	0	-5	no_combination_of_known_junctions	FALSE	canonical	1	1141	junction_6	33059.22531898408	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	1077	3125	25.0	-16	True	NA	NA
PB.2952.3	chr12	-	2620	3	novel_in_catalog	SRSF9	novel	1201	4	NA	NA	4	-6	intron_retention	FALSE	canonical	1	990598	junction_2	1020444.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	1928	2275	20.0	-42	True	AATATA	-16
PB.2952.2	chr12	-	1064	5	novel_not_in_catalog	SRSF9	novel	1201	4	NA	NA	-7	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	1093575.217219505	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	54	719	20.0	-53	True	AATATA	-16
PB.6047.2	chr19	-	3843	12	novel_not_in_catalog	ZNF45	novel	3898	10	NA	NA	-26	4	any annotated donor/acceptor	FALSE	canonical	1	13229	junction_11	31086.981210417645	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	1033	3081	30.0	-23	False	NA	NA
PB.6047.3	chr19	-	3744	11	novel_in_catalog	ZNF45	novel	3898	10	NA	NA	-10	4	no_combination_of_known_junctions	FALSE	canonical	1	10474	junction_7	33321.942504752034	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	934	2982	30.0	-7	True	NA	NA
PB.6047.1	chr19	-	4054	11	novel_in_catalog	ZNF45	novel	3898	10	NA	NA	-14	4	no_combination_of_known_junctions	FALSE	canonical	1	10474	junction_7	30632.21196061427	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	1244	3292	30.0	-11	True	NA	NA
PB.9454.5	chr5	+	2204	6	incomplete-splice_match	UBE2B	ENST00000506787.5	500	7	-71	-461	26	-1	intron_retention	FALSE	canonical	1	28426	junction_5	420462.1721917918	NA	2	NA	TRUE	NA	NA	NA	C	coding	143	432	69	500	15.0	-41	False	AATACA	-18
PB.9454.4	chr5	+	1786	6	full-splice_match	UBE2B	ENST00000265339.6	2515	6	272	457	-18	-457	multi-exon	FALSE	canonical	1	900537	junction_2	249771.4356947968	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	146	604	15.0	-15	True	AGTAAA	-17
PB.9454.3	chr5	+	3033	6	incomplete-splice_match	UBE2B	ENST00000506787.5	500	7	-148	-1213	-18	-458	intron_retention	FALSE	canonical	1	28426	junction_5	420462.1721917918	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	146	577	15.0	-15	True	AGTAAA	-16
PB.9454.2	chr5	+	1029	6	full-splice_match	UBE2B	ENST00000265339.6	2515	6	272	1214	-18	-5	multi-exon	FALSE	canonical	1	900537	junction_2	249771.4356947968	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	146	604	25.0	-15	True	AATACA	-14
PB.9454.1	chr5	+	2243	6	full-splice_match	UBE2B	ENST00000265339.6	2515	6	269	3	-21	-3	multi-exon	TRUE	canonical	1	900537	junction_2	249771.4356947968	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	149	607	35.0	-18	True	NA	NA
PB.340.2	chr1	+	8073	5	novel_in_catalog	YBX1	novel	1514	8	NA	NA	-9	4	intron_retention	FALSE	canonical	1	6335	junction_3	686787.3982050413	NA	18	NA	TRUE	NA	NA	NA	C	coding	107	324	149	472	20.0	0	True	AATAAA	-18
PB.11518.1	chr9	-	4198	9	novel_in_catalog	PIGO	novel	2588	13	NA	NA	-10	0	intron_retention	FALSE	canonical	1	68117	junction_8	69596.00691120414	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	1837	3795	15.0	-21	True	AATAAA	-15
PB.10913.1	chr7	+	3135	7	novel_not_in_catalog	ZNF783	novel	2876	14	NA	NA	7165	0	intron_retention	FALSE	canonical	1	2521	junction_1	23977.28080507787	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	606	1118	30.0	-7006	False	AATAAA	-17
PB.10913.2	chr7	+	2834	1	novel_in_catalog	ZNF783	novel	2876	14	NA	NA	16330	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	241	726	302	1027	30.0	2159	False	AATAAA	-17
PB.9248.2	chr5	+	4251	29	novel_in_catalog	KIF2A	novel	759	6	NA	NA	50421	91332	no_combination_of_known_junctions	FALSE	canonical	1	4434	junction_20	72777.85175327332	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	177	2150	15.0	-17	True	ATTAAA	-18
PB.101.1	chr1	+	2055	9	novel_in_catalog	MIIP	novel	779	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	200977	junction_1	104141.0809560161	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	170	1003	10.0	-35	True	AATAAA	-21
PB.10729.4	chr7	-	2227	18	novel_in_catalog	AC069281.2	novel	4401	16	NA	NA	-7429	-1781	intron_retention	FALSE	canonical	1	165881	junction_1	148401.93572010455	NA	0	NA	TRUE	NA	NA	NA	B	coding	652	1959	30	1988	25.0	-1	True	AATAAA	-37
PB.7617.1	chr22	-	3493	16	novel_in_catalog	ARVCF	novel	4041	20	NA	NA	4	-20	combination_of_known_junctions	FALSE	canonical	1	33993	junction_15	45888.99378989355	NA	0	NA	TRUE	NA	NA	NA	A	coding	866	2601	94	2694	60.0	0	True	AAGAAA	-5
PB.8552.10	chr3	+	3530	8	full-splice_match	KLHL24	ENST00000242810.10	2345	8	53	-1238	1	1238	multi-exon	FALSE	canonical	1	58526	junction_1	63009.553486202494	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	298	2100	45.0	-2	True	AATAAA	-14
PB.7951.8	chr3	-	3784	17	novel_not_in_catalog	XPC	novel	3832	16	NA	NA	0	-140	any annotated donor/acceptor	FALSE	canonical	1	4567	junction_2	110364.60655465974	NA	1	NA	TRUE	NA	NA	NA	C	coding	851	2556	34	2589	50.0	-1	True	AAAAAG	-36
PB.9735.3	chr6	-	3622	5	novel_in_catalog	ELOVL2	novel	3997	8	NA	NA	-60	-3	no_combination_of_known_junctions	FALSE	canonical	1	2439	junction_1	29069.995295837252	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	145	603	25.0	66	False	AATAAA	-15
PB.9248.1	chr5	+	4293	30	novel_in_catalog	KIF2A	novel	759	6	NA	NA	41670	91333	no_combination_of_known_junctions	FALSE	canonical	1	2776	junction_1	70726.99016305145	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	102	3029	15.0	-8768	False	ATTAAA	-19
PB.8981.2	chr4	-	1866	3	full-splice_match	PGRMC2	ENST00000296425.9	2767	3	-1	902	-1	468	multi-exon	FALSE	canonical	1	625478	junction_2	285213.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	23	694	40.0	-9	True	AATAAA	-17
PB.5419.11	chr18	+	3275	18	novel_in_catalog	RBBP8	novel	564	5	NA	NA	3	-9	combination_of_known_junctions	FALSE	canonical	1	35513	junction_15	91480.8275706088	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	415	3045	45.0	-23	True	AATACA	-7
PB.10078.4	chr6	-	1829	3	full-splice_match	TENT5A	ENST00000369756.3	5537	3	94	3614	28	526	multi-exon	FALSE	canonical	1	13173	junction_2	90231.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	442	1329	150	1478	65.0	0	True	NA	NA
PB.10078.5	chr6	-	1694	3	full-splice_match	TENT5A	ENST00000320172.10	5609	3	0	3915	0	225	multi-exon	FALSE	canonical	1	103487	junction_2	45074.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	433	1302	343	1644	90.0	511	False	TTTAAA	-39
PB.10078.6	chr6	-	1723	3	full-splice_match	TENT5A	ENST00000369754.7	5664	3	27	3914	27	226	multi-exon	FALSE	canonical	1	16604	junction_2	88515.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	287	1672	90.0	-1	True	TTTAAA	-40
PB.7951.2	chr3	-	3555	16	full-splice_match	XPC	ENST00000285021.11	3832	16	274	3	92	-3	multi-exon	FALSE	canonical	1	190914	junction_15	49922.02653071421	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	293	2764	30.0	119	False	AATAAA	-11
PB.5419.12	chr18	+	3448	19	novel_in_catalog	RBBP8	novel	564	5	NA	NA	5	-9	combination_of_known_junctions	FALSE	canonical	1	4298	junction_1	79905.8895457573	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	518	3211	45.0	-21	True	AATACA	-7
PB.10078.2	chr6	-	5579	3	full-splice_match	TENT5A	ENST00000320172.10	5609	3	28	2	28	-2	multi-exon	FALSE	canonical	1	103487	junction_2	45074.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	433	1302	315	1616	10.0	0	True	AATAAA	-20
PB.9945.1	chr6	+	2181	11	novel_in_catalog	DEF6	novel	2262	11	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	1	8226	junction_2	132066.90002423016	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	38	1822	20.0	2	True	AATAAA	-17
PB.6601.2	chr2	-	2911	9	full-splice_match	ST3GAL5	ENST00000640024.1	2848	9	-18	-45	3	0	multi-exon	FALSE	canonical	1	6671	junction_6	78282.09947273626	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	1046	1918	25.0	0	True	AATAAA	-12
PB.6601.3	chr2	-	2565	8	full-splice_match	ST3GAL5	ENST00000640222.1	2356	8	-162	-47	0	0	multi-exon	FALSE	canonical	1	2424	junction_5	79121.6023955067	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	700	1572	25.0	-3	True	AATAAA	-12
PB.5419.13	chr18	+	3192	18	novel_in_catalog	RBBP8	novel	564	5	NA	NA	5	-9	combination_of_known_junctions	FALSE	canonical	1	35513	junction_15	91394.86504610557	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	332	2962	45.0	-21	True	AATACA	-7
PB.9945.2	chr6	+	2934	10	novel_in_catalog	DEF6	novel	2262	11	NA	NA	-26	-2	intron_retention	FALSE	canonical	1	214698	junction_6	97370.59908069445	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	884	2575	20.0	8	True	AATAAA	-17
PB.6601.4	chr2	-	2134	7	full-splice_match	ST3GAL5	ENST00000638572.1	4431	7	173	2124	-1	19	multi-exon	FALSE	canonical	1	61105	junction_6	49742.17339664826	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	62	1234	55.0	0	True	TATAAA	-11
PB.6601.5	chr2	-	2176	6	full-splice_match	ST3GAL5	ENST00000639119.1	2131	6	-27	-18	0	0	multi-exon	FALSE	canonical	1	10585	junction_1	64967.292990858106	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	170	1183	25.0	-5	True	AATAAA	-12
PB.1064.4	chr1	-	1683	1	novel_in_catalog	ELK4	novel	2535	10	NA	NA	-9442	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	5465	False	AATAAA	-7
PB.5419.14	chr18	+	3338	19	novel_in_catalog	RBBP8	novel	564	5	NA	NA	10	-9	combination_of_known_junctions	FALSE	canonical	1	47792	junction_1	71472.3008609491	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	408	3101	45.0	-16	True	AATACA	-7
PB.6601.8	chr2	-	2834	9	full-splice_match	ST3GAL5	ENST00000639541.1	2967	9	95	38	1	19	multi-exon	FALSE	canonical	1	1839	junction_6	78992.69760464808	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	1062	1934	55.0	5	True	TATAAA	-11
PB.10729.2	chr7	-	3218	18	full-splice_match	LRCH4	ENST00000310300.10	2552	18	-19	-647	-19	-2	multi-exon	FALSE	canonical	1	306592	junction_1	131320.55632637456	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	73	2124	25.0	15	False	AATAAA	-37
PB.5419.15	chr18	+	2046	11	incomplete-splice_match	RBBP8	ENST00000399722.6	3293	19	31	32935	16	-16	3prime_fragment	FALSE	canonical	1	48395	junction_1	74328.89094026628	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1725	321	2045	65.0	-10	True	AATAAA	-29
PB.5754.4	chr19	-	4193	27	novel_not_in_catalog	TNPO2	novel	5122	26	NA	NA	28	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	207413.42220244402	NA	5	NA	TRUE	NA	NA	NA	C	coding	887	2664	331	2994	15.0	-37	True	AGTAAA	-16
PB.6186.3	chr19	+	5228	4	full-splice_match	ZNF701	ENST00000391785.7	2634	4	11	-2605	11	-3	multi-exon	FALSE	canonical	1	30627	junction_2	17799.161222434675	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	117	1514	35.0	-1	True	AATAAA	-13
PB.5754.7	chr19	-	5049	26	full-splice_match	TNPO2	ENST00000425528.5	5122	26	64	9	0	-2	multi-exon	FALSE	canonical	1	89155	junction_5	201954.16350863778	NA	1	NA	TRUE	NA	NA	NA	C	coding	897	2694	295	2988	15.0	-1	True	AGTAAA	-16
PB.8981.1	chr4	-	2586	3	full-splice_match	PGRMC2	ENST00000296425.9	2767	3	179	2	179	-2	multi-exon	FALSE	canonical	1	625478	junction_2	285213.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	2	514	25.0	1	True	AATAAA	-24
PB.5754.1	chr19	-	5027	26	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	134056	junction_25	180657.83984715416	NA	1	NA	TRUE	NA	NA	NA	C	coding	887	2664	295	2958	5.0	-1	True	AGTAAA	-24
PB.6186.4	chr19	+	2624	4	full-splice_match	ZNF701	ENST00000391785.7	2634	4	12	-2	12	2	multi-exon	FALSE	canonical	1	30627	junction_2	17799.161222434675	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	116	1513	30.0	0	True	NA	NA
PB.5754.3	chr19	-	4819	25	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	1	97882	junction_24	169456.39192264984	NA	3	NA	TRUE	NA	NA	NA	C	coding	887	2664	95	2758	15.0	2	True	AGTAAA	-16
PB.5841.1	chr19	-	2416	2	full-splice_match	LRRC25	ENST00000339007.3	2415	2	-4	3	-4	2	multi-exon	FALSE	canonical	1	105274	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	305	918	659	1576	30.0	0	True	AATAAA	-18
PB.5419.17	chr18	+	1725	11	incomplete-splice_match	RBBP8	ENST00000399725.6	3260	18	27	33324	-8	-407	3prime_fragment	FALSE	canonical	1	47792	junction_1	74497.33495394315	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1335	391	1725	60.0	1	True	GATAAA	-40
PB.5754.9	chr19	-	5090	25	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	0	-4	intron_retention	FALSE	canonical	1	134056	junction_24	184225.1192843321	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	1082	3031	15.0	-1	True	AGTAAA	-14
PB.5299.1	chr17	-	2454	5	full-splice_match	CBX4	ENST00000269397.8	2664	5	71	139	29	-139	multi-exon	FALSE	canonical	1	238616	junction_3	69712.16274080155	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	108	1790	100.0	109	False	NA	NA
PB.5299.2	chr17	-	1964	1	incomplete-splice_match	CBX4	ENST00000269397.8	2664	5	4171	139	2623	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	393	1182	119	1300	100.0	4209	False	NA	NA
PB.5940.1	chr19	-	3090	4	novel_in_catalog	AC002116.1	novel	1130	7	NA	NA	11	-478	intron_retention	FALSE	canonical	1	186725	junction_3	70908.36272886922	NA	1	NA	TRUE	NA	NA	NA	A	coding	112	339	7	345	15.0	-18	True	AATAAA	-19
PB.5940.2	chr19	-	3326	3	full-splice_match	ALKBH6	ENST00000471323.1	3326	3	-19	19	-4	-17	multi-exon	FALSE	canonical	1	186725	junction_2	19851.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	3653	False	NA	NA
PB.9735.1	chr6	-	4019	8	full-splice_match	ELOVL2	ENST00000354666.3	3997	8	-25	3	-25	-3	multi-exon	FALSE	canonical	1	34132	junction_7	18210.602083536338	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	110	1000	25.0	101	False	AATAAA	-15
PB.7082.1	chr2	-	1965	2	full-splice_match	MSL3P1	ENST00000438684.1	2032	2	58	9	58	-9	multi-exon	FALSE	canonical	1	49314	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	356	1071	216	1286	60.0	-1	True	AATAAA	-15
PB.943.2	chr1	-	4090	1	novel_in_catalog	GAS5	novel	723	13	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-13
PB.10948.1	chr7	+	3343	1	incomplete-splice_match	RBM33	ENST00000341148.7	7058	5	31557	0	11587	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	134	405	91	495	10.0	7528	False	AATAAA	-21
PB.11537.10	chr9	-	5050	13	novel_not_in_catalog	RNF38	novel	5012	12	NA	NA	342	-1	any annotated donor/acceptor	FALSE	canonical	1	913	junction_12	104790.05826757719	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	405	1703	25.0	486	False	AATAAA	-16
PB.11282.36	chr8	-	3297	21	incomplete-splice_match	UBR5	ENST00000220959.8	9418	59	-40	51374	30	-6243	3prime_fragment	FALSE	canonical	1	132976	junction_13	84847.7668553952	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2802	496	3297	70.0	164	False	NA	NA
PB.1219.52	chr1	-	4063	1	novel_in_catalog	LYST	novel	13480	53	NA	NA	5851	-27554	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	6965	False	NA	NA
PB.7950.11	chr3	+	2698	8	incomplete-splice_match	TMEM43	ENST00000306077.4	3341	12	7603	0	7528	0	5prime_fragment	FALSE	canonical	1	528510	junction_6	183852.63111968958	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	128	814	15.0	-6684	False	AATAAA	-13
PB.3292.1	chr14	+	1812	4	novel_in_catalog	PNP	novel	557	4	NA	NA	6	-1	intron_retention	FALSE	canonical	1	782955	junction_1	182063.8381795426	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	934	1320	15.0	-9112	False	AATAAA	-21
PB.3292.2	chr14	+	1482	6	full-splice_match	PNP	ENST00000361505.9	1509	6	27	0	0	0	multi-exon	FALSE	canonical	1	782955	junction_1	203400.4433283271	NA	1	NA	TRUE	NA	NA	NA	C	coding	289	870	120	989	15.0	0	True	AATAAA	-22
PB.1064.2	chr1	-	5044	1	novel_in_catalog	ELK4	novel	2535	10	NA	NA	12671	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	7677	False	AATAAA	-8
PB.4390.2	chr16	-	2634	3	full-splice_match	ZNF668	ENST00000538906.5	2865	3	228	3	228	0	multi-exon	FALSE	canonical	1	7452	junction_2	43417.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	558	2417	15.0	965	False	ATTAAA	-15
PB.4390.1	chr16	-	2190	3	full-splice_match	ZNF668	ENST00000300849.4	2762	3	575	-3	-33	1	multi-exon	FALSE	canonical	1	71612	junction_2	11337.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	110	1969	5.0	6	True	ATTAAA	-19
PB.9037.5	chr4	+	2359	10	novel_in_catalog	GUCY1A1	novel	2715	10	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	1	19088	junction_2	56771.390453508284	NA	4	NA	TRUE	NA	NA	NA	C	coding	455	1368	807	2174	80.0	8	True	NA	NA
PB.9235.28	chr5	+	3509	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-29	-8	any annotated donor/acceptor	FALSE	canonical	1	1458	junction_2	345846.4690566787	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	1261	2682	20.0	3	True	AATAAA	-9
PB.8461.35	chr3	-	3787	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-2	-1240	any annotated donor/acceptor	FALSE	canonical	1	2825	junction_5	192702.29149858482	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	267	1457	75.0	-3	True	AAAAAG	-17
PB.7837.8	chr22	-	2001	7	full-splice_match	RRP7A	ENST00000323013.6	3801	7	-19	1819	-19	-1819	multi-exon	FALSE	canonical	1	9975	junction_2	291903.20223858266	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	36	878	20.0	-1	True	NA	NA
PB.1219.53	chr1	-	2594	2	novel_not_in_catalog	LYST	novel	7069	23	NA	NA	-22	-50347	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	111	336	1278	1613	85.0	50	True	NA	NA
PB.7837.9	chr22	-	1248	7	full-splice_match	RRP7A	ENST00000323013.6	3801	7	-13	2566	-13	2143	multi-exon	FALSE	canonical	1	9975	junction_2	291903.20223858266	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	30	872	25.0	5	True	AATACA	-18
PB.3000.6	chr12	+	1835	4	full-splice_match	TMED2	ENST00000262225.7	2560	4	21	704	3	531	multi-exon	FALSE	canonical	1	2557016	junction_2	412341.79019541	NA	3	NA	TRUE	NA	NA	NA	C	coding	201	606	86	691	55.0	0	True	NA	NA
PB.3000.4	chr12	+	2561	4	full-splice_match	TMED2	ENST00000262225.7	2560	4	3	-4	1	4	multi-exon	FALSE	canonical	1	2557016	junction_2	412341.79019541	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	104	709	25.0	-18	True	NA	NA
PB.3000.5	chr12	+	2255	5	novel_not_in_catalog	TMED2	novel	2560	4	NA	NA	2	-443	any annotated donor/acceptor	FALSE	canonical	1	4795	junction_3	1292987.1818801027	NA	2	NA	TRUE	NA	NA	NA	C	coding	196	591	103	693	35.0	-17	True	AATAAA	-12
PB.3000.2	chr12	+	1941	4	novel_not_in_catalog	TMED2	novel	2560	4	NA	NA	-1	-443	any annotated donor/acceptor	FALSE	canonical	1	1735	junction_1	1465723.0291909405	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	108	536	35.0	-22	True	AATAAA	-12
PB.3000.3	chr12	+	4047	3	full-splice_match	TMED2	ENST00000509052.2	1975	3	-1031	-1041	0	-443	multi-exon	FALSE	canonical	1	2557016	junction_1	453248.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	107	577	35.0	-21	True	AATAAA	-12
PB.3000.1	chr12	+	1978	4	full-splice_match	TMED2	ENST00000262225.7	2560	4	139	443	72	-443	multi-exon	FALSE	canonical	1	2557016	junction_2	412341.79019541	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	94	573	35.0	118	False	AATAAA	-12
PB.5790.3	chr19	+	2546	12	full-splice_match	ZNF333	ENST00000292530.10	4672	12	-47	2173	-1	-1058	multi-exon	FALSE	canonical	1	44487	junction_1	16757.38101393774	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	139	2136	10.0	-13	True	NA	NA
PB.142.1	chr1	-	3074	3	novel_in_catalog	MUL1	novel	2438	4	NA	NA	11	-2	intron_retention	FALSE	canonical	1	206592	junction_2	38266.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	1337	1834	15.0	-16	True	ATTAAA	-13
PB.12048.13	chrX	+	2990	15	novel_in_catalog	CDK16	novel	562	3	NA	NA	2	-2	intron_retention	FALSE	canonical	1	21032	junction_8	449075.9960755529	NA	3	NA	TRUE	NA	NA	NA	C	coding	281	846	401	1246	35.0	0	True	ATTAAA	-11
PB.142.3	chr1	-	2299	4	full-splice_match	MUL1	ENST00000264198.4	2438	4	10	129	10	-129	multi-exon	FALSE	canonical	1	206592	junction_3	48066.94513095483	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	128	1186	10.0	-17	True	NA	NA
PB.10685.1	chr7	+	2988	17	novel_not_in_catalog	DYNC1I1	novel	2146	17	NA	NA	-24	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	34288.0207734786	NA	9	3	TRUE	NA	NA	NA	A	coding	550	1653	503	2155	30.0	-152	False	AATAAA	-16
PB.11282.34	chr8	-	6851	45	incomplete-splice_match	UBR5	ENST00000220959.8	9418	59	-44	23393	26	-5935	3prime_fragment	FALSE	canonical	1	132976	junction_37	119099.43669863354	NA	0	NA	TRUE	NA	NA	NA	C	coding	2117	6351	500	6850	70.0	160	False	AATGAA	-15
PB.12048.12	chrX	+	3367	15	novel_in_catalog	CDK16	novel	562	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	167524	junction_1	339241.7185513802	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	401	1408	35.0	0	True	ATTAAA	-13
PB.12064.5	chrX	+	1734	9	novel_in_catalog	WDR13	novel	437	3	NA	NA	-38	-2	combination_of_known_junctions	FALSE	canonical	1	79626	junction_1	293939.4226486131	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	469	1650	10.0	-34	True	AATAAA	-18
PB.12064.4	chrX	+	1812	10	novel_not_in_catalog	WDR13	novel	437	3	NA	NA	3	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	304908.3541676251	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	200	1657	25.0	3	True	NA	NA
PB.1219.50	chr1	-	2320	3	incomplete-splice_match	LYST	ENST00000465349.5	5220	12	-52	37128	-52	104	3prime_fragment	FALSE	canonical	1	9706	junction_2	99727.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	20	True	AATAAA	-24
PB.6714.6	chr2	+	3331	28	novel_not_in_catalog	PTPN4	novel	10300	27	NA	NA	-47	-26	any annotated donor/acceptor	FALSE	canonical	1	7688	junction_11	36950.258627130024	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	1425	3329	70.0	-15	True	NA	NA
PB.12064.1	chrX	+	1701	10	full-splice_match	WDR13	ENST00000376729.9	5469	10	18	3750	4	-1	multi-exon	FALSE	canonical	1	242573	junction_1	246502.89144669328	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	159	1616	10.0	4	True	AATAAA	-19
PB.12048.11	chrX	+	2116	16	full-splice_match	CDK16	ENST00000357227.8	3144	16	23	1005	1	1	multi-exon	FALSE	canonical	1	167524	junction_1	327833.5020903548	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	402	1892	0.0	-1	True	NA	NA
PB.12064.3	chrX	+	1768	9	full-splice_match	WDR13	ENST00000218056.9	2124	9	280	76	-37	-1	multi-exon	FALSE	canonical	1	528294	junction_1	186132.093796986	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	226	1683	10.0	-33	True	AATAAA	-19
PB.12064.2	chrX	+	2402	8	full-splice_match	WDR13	ENST00000479279.5	2486	8	78	6	78	-6	multi-exon	FALSE	canonical	1	549068	junction_1	167686.52970069248	NA	3	NA	TRUE	NA	NA	NA	C	coding	393	1182	1066	2247	25.0	-459	False	NA	NA
PB.848.5	chr1	+	2329	4	full-splice_match	PEA15	ENST00000360472.8	2471	4	135	7	51	-7	multi-exon	FALSE	canonical	1	1933448	junction_1	651201.4241159695	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	54	446	45.0	-9798	False	AATAAA	-18
PB.11344.7	chr8	-	1911	1	incomplete-splice_match	ASAP1	ENST00000524124.5	5478	24	126198	650	57750	88	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-573	False	AATAAA	-11
PB.5893.11	chr19	+	3256	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	-375	any annotated donor/acceptor	FALSE	canonical	1	12525	junction_2	36290.66411196549	NA	2	NA	TRUE	NA	NA	NA	C	coding	196	591	226	816	70.0	0	True	NA	NA
PB.7475.10	chr21	-	3249	17	full-splice_match	APP	ENST00000357903.7	3543	17	18	276	-2	-275	multi-exon	FALSE	canonical	1	1846989	junction_10	1338998.3086975818	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	150	2405	75.0	-4	True	NA	NA
PB.7475.11	chr21	-	3253	17	full-splice_match	APP	ENST00000358918.7	2366	17	-103	-784	-3	-275	multi-exon	FALSE	canonical	1	155055	junction_3	1810247.5482132616	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	151	2409	75.0	-5	True	NA	NA
PB.5763.4	chr19	+	1677	10	novel_in_catalog	CALR	novel	957	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	26229	junction_9	5305121.330829149	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	71	1324	0.0	1	True	ATTAAA	-17
PB.7475.13	chr21	-	3102	17	full-splice_match	APP	ENST00000357903.7	3543	17	3	438	3	343	multi-exon	FALSE	canonical	1	1846989	junction_10	1338998.3086975818	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	165	2420	45.0	938	False	NA	NA
PB.5763.2	chr19	+	1741	8	incomplete-splice_match	CALR	ENST00000316448.9	1903	9	525	0	487	0	5prime_fragment	FALSE	canonical	1	11867409	junction_1	1632563.061089325	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	275	1165	0.0	-9	True	ATTAAA	-17
PB.5763.3	chr19	+	1995	8	novel_in_catalog	CALR	novel	957	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	6545278	junction_1	3232626.9100290495	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	934	1419	0.0	1	True	ATTAAA	-17
PB.5763.1	chr19	+	1938	9	full-splice_match	CALR	ENST00000316448.9	1903	9	3	-38	3	38	multi-exon	FALSE	canonical	1	6545278	junction_1	3185457.388230591	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	71	1324	25.0	1	True	NA	NA
PB.3731.1	chr15	+	1326	10	full-splice_match	SNRPN	ENST00000390687.8	1528	10	61	141	-15	0	multi-exon	FALSE	canonical	1	1834815	junction_6	451147.3306313609	NA	0	NA	TRUE	NA	NA	NA	A	coding	240	723	466	1188	25.0	-1	True	AATAAA	-23
PB.9529.4	chr5	-	2632	20	novel_in_catalog	FCHSD1	novel	4320	20	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	98925	junction_16	37522.00054616157	NA	0	NA	TRUE	NA	NA	NA	B	coding	688	2067	51	2117	15.0	-23	True	NA	NA
PB.9529.2	chr5	-	2741	21	novel_in_catalog	FCHSD1	novel	4320	20	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	15354	junction_3	55763.66572372641	NA	0	NA	TRUE	NA	NA	NA	B	coding	670	2013	51	2063	10.0	-23	True	NA	NA
PB.7837.2	chr22	-	2940	8	novel_in_catalog	RRP7A	novel	3801	7	NA	NA	3	-966	intron_retention	FALSE	canonical	1	5623	junction_6	361227.7858208879	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	650	964	25.0	2	True	NA	NA
PB.9529.1	chr5	-	4290	20	novel_in_catalog	FCHSD1	novel	4320	20	NA	NA	-9	0	intron_retention	FALSE	canonical	1	98925	junction_16	37522.00054616157	NA	1	1	TRUE	NA	NA	NA	B	coding	688	2067	29	2095	20.0	-1	True	NA	NA
PB.4053.4	chr15	+	8480	35	novel_in_catalog	AKAP13	novel	712	2	NA	NA	19	-908	intron_retention	FALSE	canonical	1	64889	junction_1	121652.49971787016	NA	0	NA	TRUE	NA	NA	NA	C	coding	2758	8274	205	8478	70.0	1	True	NA	NA
PB.1064.1	chr1	-	3266	1	novel_in_catalog	ELK4	novel	2535	10	NA	NA	-11024	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	9455	False	AATAAA	-8
PB.5559.3	chr19	-	2427	8	full-splice_match	POLR2E	ENST00000615234.4	2831	8	-26	430	-3	-414	multi-exon	FALSE	canonical	1	1177838	junction_6	564289.1103179182	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	69	701	80.0	8373	False	NA	NA
PB.6869.5	chr2	+	3355	23	novel_in_catalog	OSBPL6	novel	3637	26	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	20578	junction_12	21778.32623251083	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	539	3142	100.0	-25	True	NA	NA
PB.5559.2	chr19	-	2853	8	full-splice_match	POLR2E	ENST00000615234.4	2831	8	-18	-4	0	4	multi-exon	FALSE	canonical	1	1177838	junction_6	564289.1103179182	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	61	693	20.0	-1	True	AATAAA	-21
PB.5559.1	chr19	-	4323	8	full-splice_match	POLR2E	ENST00000615234.4	2831	8	-24	-1468	-1	1468	multi-exon	FALSE	canonical	1	1177838	junction_6	564289.1103179182	NA	1	1	TRUE	NA	NA	NA	C	coding	210	633	67	699	30.0	-7	True	NA	NA
PB.10955.13	chr7	-	3726	27	novel_in_catalog	NCAPG2	novel	4134	30	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	6520	junction_12	119721.11770640058	NA	3	NA	TRUE	NA	NA	NA	C	coding	1085	3258	120	3377	25.0	-1	True	AATAAA	-9
PB.6562.5	chr2	-	4278	29	novel_in_catalog	AC006030.1	novel	5059	39	NA	NA	-28476	-149552	intron_retention	FALSE	canonical	1	7746	junction_28	419826.6824273231	NA	1	NA	TRUE	NA	NA	NA	B	coding	1257	3774	162	3935	5.0	-7	True	ATTAAA	-18
PB.9535.5	chr5	+	3533	8	full-splice_match	NDFIP1	ENST00000253814.5	3851	8	306	12	23	-12	multi-exon	FALSE	canonical	1	831359	junction_1	319562.856889322	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	165	830	65.0	23	True	AATAAA	-25
PB.10955.14	chr7	-	3610	27	novel_in_catalog	NCAPG2	novel	4134	30	NA	NA	16	-9	combination_of_known_junctions	FALSE	canonical	1	56537	junction_4	114521.52734691334	NA	0	NA	TRUE	NA	NA	NA	C	coding	1096	3291	99	3389	25.0	20	True	TATAAA	-5
PB.9535.6	chr5	+	1829	8	full-splice_match	NDFIP1	ENST00000253814.5	3851	8	359	1663	76	-1415	multi-exon	FALSE	canonical	1	831359	junction_1	319562.856889322	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	112	777	30.0	-8884	False	AATAAA	-22
PB.9535.1	chr5	+	3328	8	full-splice_match	NDFIP1	ENST00000253814.5	3851	8	274	249	-9	-1	multi-exon	TRUE	canonical	1	831359	junction_1	319562.856889322	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	197	862	25.0	-9	True	AATAAA	-15
PB.9535.3	chr5	+	987	8	full-splice_match	NDFIP1	ENST00000253814.5	3851	8	283	2581	0	-2333	multi-exon	FALSE	canonical	1	831359	junction_1	319562.856889322	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	188	853	35.0	0	True	AATAAA	-10
PB.5559.6	chr19	-	2067	8	full-splice_match	POLR2E	ENST00000615234.4	2831	8	9	755	1	311	multi-exon	FALSE	canonical	1	1177838	junction_6	564289.1103179182	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	34	666	65.0	26	True	NA	NA
PB.5893.17	chr19	+	4825	3	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	185	0	intron_retention	FALSE	canonical	1	31829	junction_2	22639.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	767	1282	20.0	-448	False	NA	NA
PB.5559.5	chr19	-	2256	8	full-splice_match	POLR2E	ENST00000615234.4	2831	8	-18	593	0	473	multi-exon	FALSE	canonical	1	1177838	junction_6	564289.1103179182	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	61	693	50.0	-1	True	NA	NA
PB.11916.2	chr9	-	3250	7	novel_in_catalog	ENTPD2	novel	2095	9	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	29499	junction_6	23859.852211519574	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	59	1093	40.0	5	True	AATAAA	-12
PB.11916.3	chr9	-	2461	8	novel_in_catalog	ENTPD2	novel	2095	9	NA	NA	-15	-3	intron_retention	FALSE	canonical	1	29499	junction_7	22629.09688693668	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	64	1098	40.0	0	True	AATAAA	-12
PB.5559.4	chr19	-	2240	7	novel_not_in_catalog	POLR2E	novel	1096	8	NA	NA	1	-414	intron_retention	FALSE	non_canonical	0	0	junction_5	884694.1794116703	NA	3	1	TRUE	NA	NA	NA	C	coding	151	456	59	514	80.0	1	True	NA	NA
PB.10211.13	chr6	-	4160	18	full-splice_match	EPB41L2	ENST00000628542.2	4247	18	83	4	4	-1	multi-exon	FALSE	canonical	1	278245	junction_6	132011.04728454596	NA	0	NA	TRUE	NA	NA	NA	C	coding	935	2808	100	2907	20.0	5	True	AATAAA	-15
PB.11916.4	chr9	-	2095	9	full-splice_match	ENTPD2	ENST00000355097.6	2095	9	-12	12	-12	-3	multi-exon	FALSE	canonical	1	29499	junction_8	22145.866623015118	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	61	1548	40.0	3	True	AATAAA	-12
PB.5977.22	chr19	+	2247	12	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	17	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	781889.8039596223	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	60	1589	90.0	0	True	NA	NA
PB.12155.16	chrX	-	2269	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	22	1029	90.0	-1	True	NA	NA
PB.5977.20	chr19	+	2512	13	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	17	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	959973.3835792302	NA	1	1	TRUE	NA	NA	NA	C	coding	584	1755	100	1854	90.0	0	True	NA	NA
PB.5977.21	chr19	+	2389	16	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	17	386	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	941672.3974242988	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	60	2144	20.0	0	True	AATAAA	-23
PB.5977.26	chr19	+	2536	13	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	19	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	886708.8772126639	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	58	1878	90.0	2	True	NA	NA
PB.5977.27	chr19	+	2098	16	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	19	-54	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	941672.3974242988	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	58	1899	90.0	2	True	NA	NA
PB.5977.24	chr19	+	4702	21	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	19	-54	any annotated donor/acceptor	FALSE	canonical	1	7079	junction_11	917462.4332490391	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	2467	4044	90.0	2	True	NA	NA
PB.12155.17	chrX	-	2272	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	34	1041	90.0	-13	True	NA	NA
PB.5977.28	chr19	+	3286	21	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	171	-54	any annotated donor/acceptor	FALSE	canonical	1	353	junction_1	942428.7772155041	NA	2	1	TRUE	NA	NA	NA	C	coding	827	2484	145	2628	90.0	677	False	NA	NA
PB.5977.29	chr19	+	3355	22	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	173	-54	any annotated donor/acceptor	FALSE	canonical	1	537	junction_1	1056703.9798089366	NA	1	NA	TRUE	NA	NA	NA	C	coding	827	2484	214	2697	90.0	679	False	NA	NA
PB.2162.6	chr11	+	3583	13	novel_not_in_catalog	POLD3	novel	513	6	NA	NA	12	-324	any annotated donor/acceptor	FALSE	canonical	1	1444	junction_1	87479.54944855525	NA	2	NA	TRUE	NA	NA	NA	C	coding	448	1347	270	1616	35.0	-15	True	AATAAA	-30
PB.10211.14	chr6	-	3930	18	full-splice_match	EPB41L2	ENST00000530481.5	3914	18	-20	4	0	-1	multi-exon	FALSE	canonical	1	43565	junction_5	182598.34077724276	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	119	2677	20.0	-1	True	AATAAA	-15
PB.3725.8	chr15	-	3994	32	novel_not_in_catalog	CYFIP1	novel	6793	31	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1253	3762	100	3861	20.0	-36	True	AATAAA	-14
PB.12155.15	chrX	-	2316	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	214873.11574426896	NA	6	NA	TRUE	NA	NA	NA	C	coding	335	1008	26	1033	90.0	-5	True	NA	NA
PB.43.2	chr1	-	3534	5	full-splice_match	TP73-AS1	ENST00000423764.6	3525	5	-10	1	-10	-1	multi-exon	TRUE	canonical	1	48642	junction_1	46897.97545203844	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	1181	1786	25.0	-9	True	TTTAAA	-18
PB.43.3	chr1	-	2598	5	full-splice_match	TP73-AS1	ENST00000648479.1	3719	5	-672	1793	-13	50	multi-exon	FALSE	canonical	0	0	junction_1	68403.72372539378	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	1184	1789	15.0	-12	True	AATATA	-22
PB.9269.10	chr5	+	3131	17	novel_in_catalog	RAD17	novel	464	5	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	19698	junction_2	61727.84310581485	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	1108	2625	10.0	-17	True	ATTAAA	-11
PB.43.1	chr1	-	3539	5	incomplete-splice_match	TP73-AS1	ENST00000636630.1	2529	6	-357	-403	-7	2	intron_retention	FALSE	canonical	1	46857	junction_3	54602.94735863624	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	1178	1783	60.0	-6	True	NA	NA
PB.3725.1	chr15	-	5539	31	full-splice_match	CYFIP1	ENST00000617928.4	6793	31	-48	1302	-1	1112	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	104	3865	30.0	-40	True	NA	NA
PB.3725.6	chr15	-	4312	30	novel_in_catalog	CYFIP1	novel	6793	31	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1223	3672	79	3750	20.0	-15	True	AATAAA	-14
PB.3725.7	chr15	-	4026	32	novel_not_in_catalog	CYFIP1	novel	6793	31	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	104	3865	20.0	-40	True	AATAAA	-14
PB.3725.4	chr15	-	4443	31	full-splice_match	CYFIP1	ENST00000617928.4	6793	31	-64	2414	-17	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1253	3762	120	3881	20.0	304	False	AATAAA	-14
PB.2162.1	chr11	+	2302	12	full-splice_match	POLD3	ENST00000263681.6	3821	12	91	1428	16	515	multi-exon	FALSE	canonical	1	148275	junction_8	32316.02658431799	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	39	1439	65.0	-11	True	NA	NA
PB.810.3	chr1	+	5094	4	full-splice_match	SYT11	ENST00000368324.4	5240	4	-7	153	-7	-153	multi-exon	FALSE	canonical	1	309058	junction_1	71442.85712993909	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	261	1556	80.0	0	True	AATAAA	-20
PB.12155.10	chrX	-	2789	10	full-splice_match	MAGT1	ENST00000618282.4	2788	10	-1	0	-1	0	multi-exon	FALSE	canonical	1	431665	junction_5	107994.9962127304	NA	3	NA	TRUE	NA	NA	NA	C	coding	322	969	62	1030	90.0	-2	True	NA	NA
PB.10993.12	chr8	-	5060	5	novel_in_catalog	CNOT7	novel	6913	7	NA	NA	-1	17	intron_retention	FALSE	canonical	1	28667	junction_4	190139.16592771595	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	278	964	90.0	0	True	NA	NA
PB.6023.1	chr19	+	1175	5	full-splice_match	CD79A	ENST00000221972.7	1258	5	82	1	-78	-1	multi-exon	FALSE	canonical	1	1158337	junction_2	459316.33484914294	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	104	784	20.0	-9927	False	AATAAA	-15
PB.6023.2	chr19	+	996	5	full-splice_match	CD79A	ENST00000444740.2	567	5	-38	-391	-13	-1	multi-exon	FALSE	canonical	1	157170	junction_2	810754.1811336451	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	39	605	20.0	-9862	False	AATAAA	-15
PB.12155.11	chrX	-	2702	9	novel_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	7081	junction_4	232496.27761428783	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	65	943	90.0	-5	True	NA	NA
PB.9994.2	chr6	+	6343	12	novel_in_catalog	BICRAL	novel	6510	15	NA	NA	-80	-1	no_combination_of_known_junctions	FALSE	canonical	1	26627	junction_1	28859.210397095096	NA	1	NA	TRUE	NA	NA	NA	C	coding	1079	3240	161	3400	80.0	-4	True	TATAAA	-9
PB.9994.3	chr6	+	6403	13	full-splice_match	BICRAL	ENST00000314073.9	6530	13	-43	170	-43	0	multi-exon	FALSE	canonical	1	18482	junction_1	35348.908901124516	NA	2	NA	TRUE	NA	NA	NA	C	coding	1079	3240	220	3459	80.0	-5929	False	TATAAA	-10
PB.10993.14	chr8	-	1927	6	full-splice_match	CNOT7	ENST00000523917.5	1885	6	14	-56	1	56	multi-exon	FALSE	canonical	1	28667	junction_5	197293.3401629158	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	286	1020	25.0	-8	True	ATTAAA	-15
PB.9994.1	chr6	+	6573	14	novel_not_in_catalog	BICRAL	novel	6510	15	NA	NA	-189	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	42575.73367986391	NA	1	NA	TRUE	NA	NA	NA	C	coding	1079	3240	228	3467	35.0	-10	True	AATACA	-15
PB.9995.19	chr6	+	2532	7	novel_not_in_catalog	CNPY3	novel	954	6	NA	NA	201	4134	intron_retention	FALSE	non_canonical	0	0	junction_6	597012.9595882599	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	171	1007	40.0	0	True	AATAAA	-13
PB.9995.18	chr6	+	1477	6	full-splice_match	CNPY3	ENST00000372836.4	1704	6	202	25	202	-25	multi-exon	FALSE	canonical	1	695137	junction_1	409285.3382722621	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	170	1006	15.0	1	True	AGTAAA	-16
PB.2058.2	chr11	-	2643	20	incomplete-splice_match	LTBP3	ENST00000301873.9	4443	28	6662	2	213	-1	5prime_fragment	FALSE	canonical	1	281827	junction_4	196208.63803692412	NA	0	NA	TRUE	NA	NA	NA	B	coding	753	2262	122	2383	20.0	7705	False	GATAAA	-17
PB.9995.12	chr6	+	2422	8	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	-3	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	80930.18646200879	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	22	762	35.0	0	True	AATAAA	-24
PB.9995.11	chr6	+	1535	7	full-splice_match	RPL7L1	ENST00000304734.9	3769	7	235	1999	-3	625	multi-exon	FALSE	canonical	1	23424	junction_1	71166.49140571705	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	22	762	20.0	0	True	AATAAA	-22
PB.2058.1	chr11	-	3989	27	novel_not_in_catalog	LTBP3	novel	4046	27	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	224068.25353730033	NA	2	1	TRUE	NA	NA	NA	B	coding	753	2262	1467	3728	25.0	-17	True	GATAAA	-18
PB.9995.17	chr6	+	2588	8	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	1	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	80930.18646200879	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	14	754	40.0	8	True	AATAAA	-44
PB.9995.16	chr6	+	2332	6	full-splice_match	RPL7L1	ENST00000397415.7	1702	6	285	-915	0	624	multi-exon	FALSE	canonical	1	23424	junction_1	82184.78233249755	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	518	871	20.0	7	True	AATAAA	-21
PB.9995.15	chr6	+	1631	8	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	2	-11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_7	80930.18646200879	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	17	757	35.0	5	True	AATAAA	-45
PB.9995.14	chr6	+	2115	5	incomplete-splice_match	RPL7L1	ENST00000483998.6	1103	6	302	-625	0	625	intron_retention	FALSE	canonical	1	6822	junction_1	90513.74550171924	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	300	653	20.0	3	True	AATAAA	-22
PB.8599.17	chr3	+	6072	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	332	-4478	332	-2017	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	259	1179	70.0	-4	True	NA	NA
PB.9659.3	chr5	-	1930	13	novel_not_in_catalog	PHYKPL	novel	2038	13	NA	NA	1	5	any annotated donor/acceptor	FALSE	canonical	1	9467	junction_6	106137.64185978298	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	235	1617	50.0	17	True	AATAAA	-24
PB.6397.2	chr2	+	2720	3	full-splice_match	LBH	ENST00000401506.1	485	3	31	-2266	4	-2	multi-exon	FALSE	canonical	1	1540	junction_1	329042.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	88	267	49	315	5.0	22	True	AATAAA	-17
PB.5300.11	chr17	-	4403	3	incomplete-splice_match	TBC1D16	ENST00000310924.6	10936	12	-24	74333	-24	-56105	3prime_fragment	FALSE	canonical	1	80686	junction_2	37776.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	260	783	141	923	85.0	-1	True	NA	NA
PB.5300.10	chr17	-	3018	12	full-splice_match	TBC1D16	ENST00000310924.6	10936	12	-31	7949	-31	-2384	multi-exon	FALSE	canonical	1	80686	junction_11	61720.39538458703	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	148	2451	75.0	-8	True	NA	NA
PB.1325.4	chr10	+	4930	23	full-splice_match	MLLT10	ENST00000307729.11	5032	23	101	1	-24	-1	multi-exon	FALSE	canonical	1	74348	junction_13	56866.31077672765	NA	1	NA	TRUE	NA	NA	NA	C	coding	1068	3207	78	3284	15.0	-20	False	AATAAA	-18
PB.1325.5	chr10	+	5081	22	novel_in_catalog	MLLT10	novel	4955	23	NA	NA	60	2	combination_of_known_junctions	FALSE	canonical	1	41533	junction_12	64743.05547434563	NA	2	NA	TRUE	NA	NA	NA	C	coding	1057	3174	263	3436	20.0	-3	True	AATAAA	-17
PB.1325.6	chr10	+	1934	13	novel_in_catalog	MLLT10	novel	4955	23	NA	NA	63	2677	no_combination_of_known_junctions	FALSE	canonical	1	3230	junction_4	79992.23725149834	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1158	776	1933	70.0	0	True	NA	NA
PB.1325.7	chr10	+	1673	11	incomplete-splice_match	MLLT10	ENST00000377072.7	5126	24	68	69939	68	2677	3prime_fragment	FALSE	canonical	1	130061	junction_1	41541.87077347384	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1392	281	1672	70.0	5	True	NA	NA
PB.11192.2	chr8	+	2348	15	full-splice_match	CRISPLD1	ENST00000262207.8	4287	15	-33	1972	-33	-255	multi-exon	FALSE	canonical	1	77181	junction_1	22056.670866064025	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	502	2004	35.0	-1533	False	AATAAA	-17
PB.1325.1	chr10	+	5294	23	novel_in_catalog	MLLT10	novel	4955	23	NA	NA	51	2	combination_of_known_junctions	FALSE	canonical	1	25461	junction_3	79021.39964105551	NA	5	3	TRUE	NA	NA	NA	C	coding	938	2817	833	3649	20.0	-12	True	AATAAA	-17
PB.1325.2	chr10	+	5121	23	novel_in_catalog	MLLT10	novel	4955	23	NA	NA	53	2	combination_of_known_junctions	FALSE	canonical	1	73189	junction_1	60961.02015371641	NA	3	NA	TRUE	NA	NA	NA	C	coding	1068	3207	270	3476	20.0	-10	True	AATAAA	-17
PB.1325.3	chr10	+	4993	22	novel_in_catalog	MLLT10	novel	4955	23	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	41533	junction_12	60672.40474837068	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	175	3348	20.0	23	True	AATAAA	-17
PB.3112.50	chr13	-	5281	8	novel_in_catalog	SUPT20H	novel	3811	25	NA	NA	-12	-14	intron_retention	FALSE	canonical	1	181738	junction_7	83000.8239093604	NA	3	NA	TRUE	NA	NA	NA	C	coding	127	384	2563	2946	75.0	25	True	NA	NA
PB.9725.2	chr6	-	5055	1	novel_in_catalog	EEF1E1-BLOC1S5	novel	768	7	NA	NA	17880	-63870	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	coding	103	312	465	776	35.0	-1569	False	AATAAA	-24
PB.2556.8	chr12	-	2872	8	novel_in_catalog	TWF1	novel	3012	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	24225.750058942805	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	38	1012	15.0	334	False	AATAAA	-15
PB.6794.1	chr2	+	2419	14	incomplete-splice_match	PKP4	ENST00000389759.7	4443	22	11	18426	9	0	3prime_fragment	FALSE	canonical	1	57984	junction_9	97338.87680547521	NA	0	NA	TRUE	NA	NA	NA	A	coding	772	2316	102	2417	45.0	-1157	False	NA	NA
PB.2556.1	chr12	-	2984	9	full-splice_match	TWF1	ENST00000395510.6	3045	9	59	2	0	0	multi-exon	FALSE	canonical	1	352	junction_8	26264.597978731275	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	72	1124	15.0	-1	True	AATAAA	-15
PB.2556.3	chr12	-	3140	10	novel_in_catalog	TWF1	novel	3012	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	863	junction_7	23204.805644255117	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	522	1280	15.0	316	False	AATAAA	-15
PB.2556.5	chr12	-	3049	10	novel_in_catalog	TWF1	novel	3012	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	352	junction_9	22136.361083068736	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	431	1189	15.0	-1	True	AATAAA	-15
PB.2556.4	chr12	-	3098	10	novel_in_catalog	TWF1	novel	3012	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	863	junction_7	25494.659494988988	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	72	1238	15.0	-1	True	AATAAA	-15
PB.2556.7	chr12	-	2956	10	novel_not_in_catalog	TWF1	novel	3012	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	24170.601030442736	NA	18	3	TRUE	NA	NA	NA	C	coding	289	870	227	1096	15.0	-1	True	AATAAA	-15
PB.2556.6	chr12	-	3015	10	full-splice_match	TWF1	ENST00000552521.5	3012	10	-5	2	4	0	multi-exon	FALSE	canonical	1	863	junction_7	24028.20360419073	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	397	1155	15.0	324	False	AATAAA	-15
PB.11873.4	chr9	-	3790	23	full-splice_match	TSC1	ENST00000298552.8	8616	23	22	4804	1	15	multi-exon	FALSE	canonical	1	95250	junction_10	38090.7361196984	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	213	3707	20.0	4	True	NA	NA
PB.1070.1	chr1	-	2803	6	novel_not_in_catalog	RAB7B	novel	2888	6	NA	NA	-47	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	199	600	93	692	15.0	NA	False	AATAAA	-21
PB.11873.6	chr9	-	4312	11	novel_in_catalog	TSC1	novel	8616	23	NA	NA	0	-30	intron_retention	FALSE	canonical	1	45518	junction_1	50230.577582185935	NA	4	NA	TRUE	NA	NA	NA	C	coding	315	948	2733	3680	80.0	-8	True	NA	NA
PB.11873.7	chr9	-	2524	11	novel_in_catalog	TSC1	novel	8616	23	NA	NA	0	-30	intron_retention	FALSE	canonical	1	46383	junction_10	48951.17431522966	NA	2	NA	TRUE	NA	NA	NA	C	coding	366	1101	189	1289	80.0	-1	True	NA	NA
PB.7265.19	chr20	-	2718	16	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	93647	junction_12	443484.02272310405	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	340	1848	25.0	-7	True	AATAAA	-17
PB.11873.2	chr9	-	3236	1	incomplete-splice_match	TSC1	ENST00000643625.1	6259	8	11036	2	7373	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	4806	False	AATAAA	-19
PB.11873.3	chr9	-	3990	23	full-splice_match	TSC1	ENST00000298552.8	8616	23	6	4620	0	10	multi-exon	FALSE	canonical	1	95250	junction_10	38090.7361196984	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	229	3723	15.0	-12	True	NA	NA
PB.7265.18	chr20	-	2750	16	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	477444.41357333126	NA	7	1	TRUE	NA	NA	NA	C	coding	373	1122	759	1880	25.0	-8	True	AATAAA	-17
PB.11873.8	chr9	-	2195	12	full-splice_match	TSC1	ENST00000645150.1	2232	12	7	30	0	-30	multi-exon	FALSE	canonical	1	46383	junction_11	47338.860656245255	NA	2	1	TRUE	NA	NA	NA	C	coding	454	1365	199	1563	80.0	-11	True	NA	NA
PB.6846.1	chr2	-	1756	11	full-splice_match	OLA1	ENST00000284719.7	4417	11	100	2561	1	0	multi-exon	FALSE	canonical	1	98600	junction_5	101626.41006101712	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	148	1338	10.0	0	True	AATAAA	-16
PB.9084.5	chr4	+	2766	23	incomplete-splice_match	TRAPPC11	ENST00000334690.10	4552	30	32	18901	-24	-12249	3prime_fragment	FALSE	canonical	1	70740	junction_1	53302.233978988406	NA	3	1	TRUE	NA	NA	NA	C	coding	865	2595	171	2765	50.0	2	True	GATAAA	-12
PB.4853.3	chr17	-	3892	23	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	15134	2442	intron_retention	FALSE	canonical	1	279451	junction_19	117467.78169265558	NA	0	NA	TRUE	NA	NA	NA	B	coding	1122	3369	102	3470	30.0	-33	True	AATAAA	-19
PB.4853.2	chr17	-	3793	24	full-splice_match	SPAG5	ENST00000321765.9	4040	24	254	-7	-20	-2	multi-exon	FALSE	canonical	1	279451	junction_20	114909.29108823514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1193	3582	80	3661	30.0	-11	True	AATAAA	-22
PB.4853.1	chr17	-	3994	23	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	15158	2445	intron_retention	FALSE	canonical	1	279451	junction_19	114755.53381769928	NA	0	NA	TRUE	NA	NA	NA	B	coding	849	2550	78	2627	30.0	-9	True	AATAAA	-22
PB.4853.7	chr17	-	3945	23	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	15166	2436	intron_retention	FALSE	canonical	1	279451	junction_19	117413.41776604638	NA	0	NA	TRUE	NA	NA	NA	B	coding	933	2802	70	2871	30.0	-1	True	AATAAA	-13
PB.4853.6	chr17	-	3198	24	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	15156	2442	no_combination_of_known_junctions	TRUE	canonical	1	18598	junction_22	145173.8403757126	NA	0	NA	TRUE	NA	NA	NA	B	coding	919	2760	310	3069	30.0	-11	True	AATAAA	-19
PB.4853.4	chr17	-	3837	25	novel_not_in_catalog	AC005726.1	novel	2091	8	NA	NA	15166	2442	any annotated donor/acceptor	FALSE	canonical	1	531	junction_4	188313.68778642252	NA	0	NA	TRUE	NA	NA	NA	B	coding	837	2514	70	2583	30.0	-1	True	AATAAA	-19
PB.5698.5	chr19	-	3333	12	novel_in_catalog	AC011511.4	novel	1850	8	NA	NA	-12851	-748	intron_retention	FALSE	canonical	1	4913	junction_2	145247.7533954079	NA	1	NA	TRUE	NA	NA	NA	B	coding	691	2076	23	2098	40.0	-1	True	ATTAAA	-21
PB.5698.4	chr19	-	3407	14	novel_in_catalog	AC011511.4	novel	1850	8	NA	NA	-12856	-748	no_combination_of_known_junctions	FALSE	canonical	1	37394	junction_5	127575.33631507825	NA	0	NA	TRUE	NA	NA	NA	B	coding	714	2145	28	2172	40.0	-6	True	ATTAAA	-21
PB.4853.9	chr17	-	3668	23	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	15152	2436	no_combination_of_known_junctions	FALSE	canonical	1	7567	junction_16	153431.49546191536	NA	0	NA	TRUE	NA	NA	NA	B	coding	1153	3462	84	3545	30.0	-15	True	AATAAA	-13
PB.4853.8	chr17	-	3698	24	novel_not_in_catalog	AC005726.1	novel	2091	8	NA	NA	15390	2436	any annotated donor/acceptor	FALSE	canonical	1	702	junction_23	150495.9776537262	NA	0	NA	TRUE	NA	NA	NA	B	coding	1172	3519	57	3575	30.0	3616	False	AATAAA	-13
PB.5698.1	chr19	-	3569	12	novel_in_catalog	AC011511.4	novel	1850	8	NA	NA	-12851	-745	intron_retention	FALSE	canonical	1	328802	junction_5	54439.29091024164	NA	0	NA	TRUE	NA	NA	NA	B	coding	762	2289	23	2311	25.0	-1	True	ATTAAA	-24
PB.5698.3	chr19	-	3429	13	novel_not_in_catalog	AC011511.4	novel	1850	8	NA	NA	-12849	-748	intron_retention	FALSE	non_canonical	0	0	junction_6	139578.32707798475	NA	5	NA	TRUE	NA	NA	NA	B	coding	490	1473	21	1493	40.0	1	True	ATTAAA	-21
PB.5698.2	chr19	-	3477	13	full-splice_match	RAVER1	ENST00000617231.4	3501	13	17	7	17	0	multi-exon	FALSE	canonical	1	328802	junction_6	69904.75933070175	NA	0	NA	TRUE	NA	NA	NA	A	coding	739	2220	23	2242	40.0	-1	True	ATTAAA	-21
PB.4434.2	chr16	-	2089	4	novel_in_catalog	CRNDE	novel	2601	6	NA	NA	-26	-62	intron_retention	FALSE	canonical	1	114047	junction_3	60682.103012338	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	47	True	AATAAA	-18
PB.4434.1	chr16	-	4949	3	full-splice_match	CRNDE	ENST00000558952.1	600	3	0	-4349	0	-62	multi-exon	FALSE	canonical	1	114047	junction_2	91854.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-18
PB.1206.1	chr1	+	5841	10	full-splice_match	MAP3K21	ENST00000366624.7	5809	10	-34	2	-34	-1	multi-exon	FALSE	canonical	1	29210	junction_1	12362.81862863176	NA	0	NA	TRUE	NA	NA	NA	A	coding	1036	3111	296	3406	15.0	-2	True	AATAAA	-27
PB.912.1	chr1	-	2505	1	antisense	novelGene_DCAF6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.7901.8	chr3	+	4047	20	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-2	1000	combination_of_known_junctions	FALSE	canonical	1	1163	junction_19	22158.889361724618	NA	2	NA	TRUE	NA	NA	NA	C	coding	749	2250	458	2707	65.0	-2	True	NA	NA
PB.12379.1	chrX	+	1237	10	full-splice_match	CD99	ENST00000381192.9	1291	10	-27	81	-27	-62	multi-exon	FALSE	canonical	1	21530	junction_7	73977.75954240288	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	256	813	25.0	-9583	False	ATTAAA	-17
PB.9386.31	chr5	-	2447	5	novel_not_in_catalog	STARD4	novel	4606	6	NA	NA	0	554	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	15804.522539055079	NA	18	3	TRUE	NA	NA	NA	C	coding	114	345	192	536	40.0	-1	True	AATAAA	-25
PB.9386.30	chr5	-	1850	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-52	2808	0	561	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	188	805	20.0	1	True	AATAAA	-32
PB.11101.6	chr8	+	4017	23	novel_not_in_catalog	ADAM9	novel	2053	5	NA	NA	-50	-1	any annotated donor/acceptor	FALSE	canonical	1	12011	junction_15	359274.8443242425	NA	2	NA	TRUE	NA	NA	NA	C	coding	575	1728	129	1856	10.0	-37	True	NA	NA
PB.908.10	chr1	+	2643	2	novel_not_in_catalog	RCSD1	novel	3044	6	NA	NA	2	394	any annotated donor/acceptor	FALSE	canonical	1	3322	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	2	True	NA	NA
PB.7947.1	chr3	-	2250	1	novel_in_catalog	IQSEC1	novel	4198	16	NA	NA	-311	-110902	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	120	363	1543	1905	85.0	0	True	NA	NA
PB.9084.7	chr4	+	4546	30	novel_in_catalog	TRAPPC11	novel	4552	30	NA	NA	-20	0	intron_retention	FALSE	canonical	1	2959	junction_2	63628.94246354977	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	453	3599	10.0	6	True	AATAAA	-18
PB.11298.1	chr8	+	3530	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	-9	-2278	-9	2272	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	45	938	15.0	-22	False	NA	NA
PB.336.8	chr1	-	4794	11	novel_in_catalog	FOXJ3	novel	4468	3	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	4337	junction_9	124808.66311214138	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	704	1633	30.0	-1	True	AATAAA	-18
PB.320.7	chr1	+	4585	8	full-splice_match	RLF	ENST00000372771.4	6246	8	5	1656	5	-1656	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	1	NA	TRUE	NA	NA	NA	C	coding	1521	4563	23	4585	60.0	-9	True	NA	NA
PB.320.6	chr1	+	2124	8	full-splice_match	RLF	ENST00000372771.4	6246	8	4	4118	4	-4118	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2100	24	2123	40.0	-10	True	TTTAAA	-44
PB.320.5	chr1	+	6001	8	full-splice_match	RLF	ENST00000372771.4	6246	8	4	241	4	-241	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	0	NA	TRUE	NA	NA	NA	C	coding	1914	5745	24	5768	20.0	-10	True	ATTAAA	-13
PB.320.4	chr1	+	6331	9	novel_not_in_catalog	RLF	novel	6246	8	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	10155	junction_5	45372.623791086844	NA	1	NA	TRUE	NA	NA	NA	C	coding	1698	5097	761	5857	20.0	-10	True	AATAAA	-18
PB.320.3	chr1	+	3490	8	full-splice_match	RLF	ENST00000372771.4	6246	8	1	2755	1	-2755	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	0	NA	TRUE	NA	NA	NA	C	coding	1154	3462	27	3488	50.0	-13	True	AAAAAG	-12
PB.320.2	chr1	+	1831	9	novel_not_in_catalog	RLF	novel	6246	8	NA	NA	0	-4455	any annotated donor/acceptor	FALSE	canonical	1	2107	junction_7	49806.38719817344	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	819	1013	1831	70.0	-14	True	NA	NA
PB.320.1	chr1	+	5264	8	full-splice_match	RLF	ENST00000372771.4	6246	8	0	982	0	-982	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	2	NA	TRUE	NA	NA	NA	C	coding	1745	5235	28	5262	55.0	-14	True	AAGAAA	-29
PB.11899.1	chr9	+	2670	9	novel_not_in_catalog	GPSM1	novel	2270	9	NA	NA	5896	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	69001.65346026137	NA	1	1	TRUE	NA	NA	NA	A	coding	445	1338	289	1626	10.0	6007	False	AATAAA	-15
PB.7154.10	chr20	+	5172	8	novel_not_in_catalog	MAVS	novel	11596	6	NA	NA	5039	-5477	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	149158.4923598426	NA	17	NA	TRUE	NA	NA	NA	C	coding	540	1623	162	1784	95.0	5045	False	NA	NA
PB.7154.11	chr20	+	2478	1	incomplete-splice_match	MAVS	ENST00000416600.6	11596	6	26175	672	26131	-659	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	119	360	1576	1935	10.0	-3413	False	NA	NA
PB.11297.3	chr8	-	4048	6	full-splice_match	EIF3E	ENST00000521440.5	746	6	-31	-3271	-10	-1946	multi-exon	FALSE	canonical	1	85153	junction_1	599694.913033419	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	28	546	25.0	-13	False	ATTAAA	-18
PB.320.9	chr1	+	1799	8	full-splice_match	RLF	ENST00000372771.4	6246	8	6	4441	6	-4441	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1776	22	1797	35.0	-8	True	ATTAAA	-12
PB.320.8	chr1	+	4850	8	full-splice_match	RLF	ENST00000372771.4	6246	8	6	1390	6	-1390	multi-exon	FALSE	canonical	1	74792	junction_6	18511.110406720498	NA	0	NA	TRUE	NA	NA	NA	C	coding	1609	4827	22	4848	75.0	-8	True	NA	NA
PB.8461.38	chr3	-	2682	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-453	860	any annotated donor/acceptor	FALSE	canonical	1	331	junction_6	190250.0562169577	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	60	1262	50.0	-530	False	NA	NA
PB.511.1	chr1	+	2031	5	full-splice_match	CYR61	ENST00000451137.6	2290	5	0	259	0	-259	multi-exon	FALSE	canonical	1	1509827	junction_1	738795.9644456987	NA	0	NA	TRUE	NA	NA	NA	A	coding	381	1146	225	1370	30.0	0	True	AATAAA	-14
PB.10000.2	chr6	+	7768	41	full-splice_match	CUL9	ENST00000252050.8	7780	41	11	1	1	1	multi-exon	TRUE	canonical	1	31545	junction_1	45200.918250517876	NA	1	NA	TRUE	NA	NA	NA	C	coding	2517	7554	74	7627	20.0	-10	True	AATAAA	-19
PB.4843.1	chr17	+	2563	3	full-splice_match	TMEM97	ENST00000226230.7	2568	3	26	-21	26	21	multi-exon	TRUE	canonical	1	479582	junction_1	45116.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	120	650	40.0	-6418	False	AATAAA	-38
PB.4843.2	chr17	+	1584	3	full-splice_match	TMEM97	ENST00000226230.7	2568	3	60	924	-47	250	multi-exon	FALSE	canonical	1	479582	junction_1	45116.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	86	616	40.0	-45	True	ATTAAA	-27
PB.4843.3	chr17	+	2020	3	full-splice_match	TMEM97	ENST00000226230.7	2568	3	90	458	-17	2	multi-exon	FALSE	canonical	1	479582	junction_1	45116.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	56	586	5.0	-15	True	AATAAA	-18
PB.3616.9	chr14	-	2252	11	incomplete-splice_match	RPS6KA5	ENST00000648062.1	4065	19	141248	664	-7898	-9	5prime_fragment	FALSE	canonical	1	2493	junction_10	24848.964436370385	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	126	1691	80.0	NA	False	ATTAAA	-8
PB.3616.8	chr14	-	3057	17	novel_not_in_catalog	RPS6KA5	novel	26795	17	NA	NA	-35	-8	any annotated donor/acceptor	FALSE	canonical	1	48	junction_16	21061.281680546977	NA	5	NA	TRUE	NA	NA	NA	C	coding	789	2370	126	2495	85.0	515	False	ATTAAA	-9
PB.3616.1	chr14	-	3905	17	full-splice_match	RPS6KA5	ENST00000614987.4	26795	17	-76	22966	-48	21	multi-exon	TRUE	canonical	1	48957	junction_16	13174.085831662096	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	251	2659	100.0	0	True	ATTAAA	-43
PB.6514.7	chr2	+	3401	6	full-splice_match	ETAA1	ENST00000272342.5	3418	6	14	3	-3	-3	multi-exon	FALSE	canonical	1	89741	junction_1	22533.260726313005	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	117	2897	30.0	0	True	AATAAA	-20
PB.3616.3	chr14	-	3166	17	novel_not_in_catalog	RPS6KA5	novel	26795	17	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	1889	junction_3	21134.18623307685	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	209	2596	85.0	-7	True	ATTAAA	-17
PB.3616.2	chr14	-	3367	17	full-splice_match	RPS6KA5	ENST00000614987.4	26795	17	23	23405	0	237	multi-exon	FALSE	canonical	1	48957	junction_16	13174.085831662096	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	152	2560	15.0	50	True	AATAAA	-35
PB.3616.5	chr14	-	2932	15	novel_in_catalog	RPS6KA5	novel	26795	17	NA	NA	-42	0	no_combination_of_known_junctions	FALSE	canonical	1	85	junction_14	22209.20895043499	NA	2	NA	TRUE	NA	NA	NA	C	coding	705	2118	245	2362	85.0	6	True	ATTAAA	-17
PB.3616.4	chr14	-	3014	17	full-splice_match	RPS6KA5	ENST00000536315.6	2993	17	-21	0	-21	0	multi-exon	FALSE	canonical	1	1277	junction_16	20817.274017027303	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	273	2444	85.0	529	False	ATTAAA	-17
PB.3616.7	chr14	-	3104	16	novel_in_catalog	RPS6KA5	novel	26795	17	NA	NA	-3	-8	no_combination_of_known_junctions	FALSE	canonical	1	674	junction_15	21439.824158690193	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	206	2542	85.0	-4	True	ATTAAA	-9
PB.3616.6	chr14	-	3146	17	full-splice_match	RPS6KA5	ENST00000614987.4	26795	17	4	23645	4	-3	multi-exon	FALSE	canonical	1	48957	junction_16	13174.085831662096	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	171	2579	80.0	31	True	ATTAAA	-14
PB.10333.4	chr6	+	2875	3	novel_in_catalog	Z94721.2	novel	5310	13	NA	NA	123348	-213	no_combination_of_known_junctions	FALSE	canonical	1	2141	junction_1	26827.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	374	1125	178	1302	100.0	0	True	NA	NA
PB.4966.29	chr17	-	3297	24	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	58	11356	58	-3489	3prime_fragment	FALSE	canonical	1	528600	junction_20	196816.51782099833	NA	1	NA	TRUE	NA	NA	NA	C	coding	1065	3195	102	3296	35.0	-12	True	AATAGA	-18
PB.10333.6	chr6	+	3294	4	novel_in_catalog	Z94721.2	novel	5310	13	NA	NA	123664	-2	no_combination_of_known_junctions	FALSE	canonical	1	1342	junction_1	25072.493644541133	NA	2	NA	TRUE	NA	NA	NA	B	coding	342	1029	482	1510	35.0	-27	True	AATAAA	-19
PB.10333.7	chr6	+	3153	3	full-splice_match	CCR6	ENST00000341935.9	4018	3	308	557	306	-2	multi-exon	FALSE	canonical	1	21824	junction_1	16985.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	245	1369	35.0	-19	True	AATAAA	-19
PB.10333.1	chr6	+	3218	3	full-splice_match	CCR6	ENST00000400926.5	3216	3	-4	2	-4	-2	multi-exon	FALSE	canonical	1	15554	junction_1	20120.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	374	1125	310	1434	35.0	5	True	AATAAA	-19
PB.10333.2	chr6	+	3247	4	full-splice_match	CCR6	ENST00000349984.6	2980	4	-74	-193	-72	-2	multi-exon	FALSE	canonical	1	1982	junction_1	22220.042939252442	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	339	1463	35.0	-434	False	AATAAA	-19
PB.10333.3	chr6	+	3091	3	novel_in_catalog	Z94721.2	novel	5310	13	NA	NA	123343	-2	no_combination_of_known_junctions	FALSE	canonical	1	2141	junction_1	26827.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	374	1125	183	1307	35.0	-5	True	AATAAA	-19
PB.10333.8	chr6	+	1732	3	full-splice_match	CCR6	ENST00000341935.9	4018	3	329	1957	327	82	multi-exon	FALSE	canonical	1	21824	junction_1	16985.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	224	1348	80.0	2	True	NA	NA
PB.10092.4	chr6	-	6274	13	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-27711	-50352	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	354781.7401338306	NA	2	NA	TRUE	NA	NA	NA	B	coding	562	1689	162	1850	25.0	-10	True	AATAAA	-22
PB.10092.6	chr6	-	6140	10	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-27742	-50354	no_combination_of_known_junctions	FALSE	canonical	1	11544	junction_6	381487.74357199774	NA	1	NA	TRUE	NA	NA	NA	B	coding	465	1398	193	1590	20.0	-41	True	AATAAA	-20
PB.10092.7	chr6	-	6226	11	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-27701	-50355	no_combination_of_known_junctions	FALSE	canonical	1	45952	junction_1	362941.5886348105	NA	3	NA	TRUE	NA	NA	NA	B	coding	463	1392	286	1677	20.0	0	True	AATAAA	-19
PB.6409.1	chr2	-	2078	9	full-splice_match	FEZ2	ENST00000379245.8	2097	9	15	4	-10	1	multi-exon	FALSE	canonical	1	85000	junction_4	225011.80279543117	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	35	1177	40.0	-27	True	AATAAA	-15
PB.1926.1	chr11	+	2146	3	novel_not_in_catalog	DDB2	novel	556	4	NA	NA	7	-7582	intron_retention	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-34	True	NA	NA
PB.6372.11	chr2	-	2943	17	novel_not_in_catalog	SLC5A6	novel	2307	3	NA	NA	9	0	intron_retention	FALSE	canonical	1	10696	junction_9	172359.6693639042	NA	1	1	TRUE	NA	NA	NA	C	coding	584	1755	342	2096	15.0	8	True	AATAAA	-19
PB.1926.3	chr11	+	2739	8	novel_in_catalog	DDB2	novel	556	4	NA	NA	21	-4	intron_retention	FALSE	canonical	1	44776	junction_4	219177.1584552793	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	1289	1981	35.0	-20	True	AATAAA	-34
PB.1926.2	chr11	+	1822	10	novel_not_in_catalog	DDB2	novel	556	4	NA	NA	7	-2	any annotated donor/acceptor	FALSE	canonical	1	3601	junction_1	203778.01775158534	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	189	1457	10.0	-34	True	AATAAA	-12
PB.1926.5	chr11	+	2587	3	incomplete-splice_match	DDB2	ENST00000612309.4	3101	8	-121	5508	-18	750	3prime_fragment	FALSE	canonical	1	371818	junction_1	22200.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	1278	1841	90.0	-9	True	NA	NA
PB.1926.4	chr11	+	2918	9	novel_in_catalog	DDB2	novel	556	4	NA	NA	-23	3	intron_retention	FALSE	canonical	1	371818	junction_1	141017.24037662026	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	1283	2524	20.0	-14	True	AATAAA	-41
PB.1926.7	chr11	+	1696	10	full-splice_match	DDB2	ENST00000256996.8	1870	10	152	22	-1	1	multi-exon	FALSE	canonical	1	344205	junction_1	141145.86286988348	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	44	1327	10.0	49	True	AATAAA	-16
PB.1926.6	chr11	+	4562	8	novel_in_catalog	DDB2	novel	556	4	NA	NA	-5	1	intron_retention	FALSE	canonical	1	344205	junction_1	156487.67454157074	NA	7	NA	TRUE	NA	NA	NA	C	coding	308	927	151	1077	10.0	4	True	AATAAA	-16
PB.6514.8	chr2	+	3254	6	novel_not_in_catalog	ETAA1	novel	3418	6	NA	NA	-3	-144	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	71840.66638499395	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	117	2891	30.0	0	True	AATAAA	-15
PB.6512.15	chr2	+	3271	8	novel_in_catalog	ACTR2	novel	3861	9	NA	NA	4	-352	no_combination_of_known_junctions	FALSE	canonical	1	3063	junction_5	523976.7542727483	NA	9	NA	TRUE	NA	NA	NA	C	coding	344	1035	70	1104	60.0	10	True	NA	NA
PB.3599.14	chr14	-	6417	21	novel_not_in_catalog	SEL1L	novel	7925	21	NA	NA	-5	-1373	any annotated donor/acceptor	FALSE	canonical	1	1714	junction_19	118449.0003272611	NA	13	1	TRUE	NA	NA	NA	C	coding	615	1848	520	2367	25.0	6	True	AATAAA	-16
PB.6512.16	chr2	+	2653	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	105	1103	21	4	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	5	NA	TRUE	NA	NA	NA	C	coding	394	1185	53	1237	50.0	-270	False	AATAAA	-19
PB.6512.11	chr2	+	3206	6	novel_not_in_catalog	ACTR2	novel	3861	9	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	575881.6767692474	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	147	689	25.0	-4	True	AATAAA	-20
PB.6512.10	chr2	+	3178	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	73	610	-7	497	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	85	1269	65.0	-5	True	TTTAAA	-13
PB.6512.13	chr2	+	3420	9	full-splice_match	ACTR2	ENST00000260641.9	3861	9	89	352	5	-352	multi-exon	FALSE	canonical	1	417850	junction_7	431922.3213686512	NA	19	NA	TRUE	NA	NA	NA	C	coding	394	1185	69	1253	60.0	11	True	NA	NA
PB.6512.12	chr2	+	3715	10	novel_not_in_catalog	ACTR2	novel	3861	9	NA	NA	-2	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	476740.1245107687	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	80	1264	30.0	0	True	AATAAA	-16
PB.9878.1	chr6	-	1967	20	full-splice_match	ABHD16A	ENST00000395952.7	2103	20	133	3	0	-3	multi-exon	TRUE	canonical	1	282570	junction_15	137116.7377338379	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	31	1707	35.0	-1	True	AATAAA	-25
PB.9878.3	chr6	-	1852	18	novel_in_catalog	ABHD16A	novel	2103	20	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	26553	junction_17	176040.62799782475	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	583	1602	35.0	-20	True	AATAAA	-15
PB.9878.2	chr6	-	3243	18	novel_in_catalog	ABHD16A	novel	2103	20	NA	NA	-1	0	intron_retention	FALSE	canonical	1	282570	junction_13	134882.38569043495	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	1730	2479	35.0	-31	True	AATAAA	-18
PB.3599.19	chr14	-	5288	21	full-splice_match	SEL1L	ENST00000336735.8	7925	21	11	2626	-1	-2626	multi-exon	FALSE	canonical	1	299117	junction_15	72190.72962680181	NA	2	NA	TRUE	NA	NA	NA	C	coding	794	2385	107	2491	70.0	-6	True	NA	NA
PB.4980.8	chr17	+	3926	4	full-splice_match	CNP	ENST00000393892.7	5217	4	54	1237	0	-1237	multi-exon	FALSE	canonical	1	445247	junction_1	349930.42517715815	NA	2	NA	TRUE	NA	NA	NA	C	coding	421	1266	91	1356	60.0	0	True	AATAAA	-11
PB.3799.2	chr15	+	3496	19	full-splice_match	TYRO3	ENST00000263798.7	8207	19	188	4523	-5	258	multi-exon	FALSE	canonical	1	34874	junction_9	65398.97409870877	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	55	2709	55.0	4	True	NA	NA
PB.1581.10	chr10	+	4274	11	novel_not_in_catalog	R3HCC1L	novel	3372	9	NA	NA	25	0	any annotated donor/acceptor	FALSE	canonical	1	455	junction_1	76936.90794469193	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	1202	3538	15.0	38	True	ATTAAA	-17
PB.3799.4	chr15	+	2815	11	incomplete-splice_match	TYRO3	ENST00000559066.5	3876	19	11013	-530	1309	-3	5prime_fragment	FALSE	canonical	1	34874	junction_1	57690.78293419149	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	98	1756	10.0	7048	False	AATAAA	-18
PB.10323.3	chr6	-	3227	3	full-splice_match	PDE10A	ENST00000444465.1	798	3	-141	-2288	-1	2288	multi-exon	FALSE	canonical	1	8816	junction_1	6157.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	101	306	1491	1796	25.0	-12	True	NA	NA
PB.10323.2	chr6	-	2788	3	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	-5	1110	any annotated donor/acceptor	FALSE	canonical	1	3924	junction_1	8603.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	103	312	623	934	10.0	-2	True	AGTAAA	-16
PB.10323.1	chr6	-	6728	2	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	-17	-5819	any annotated donor/acceptor	FALSE	canonical	1	2350	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	3555	3950	30.0	-41	True	AATAAA	-23
PB.10323.7	chr6	-	2957	5	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	20	536	any annotated donor/acceptor	FALSE	canonical	1	949	junction_3	2908.9143486015532	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-4	True	NA	NA
PB.3524.13	chr14	+	3501	10	full-splice_match	EXD2	ENST00000409949.5	2688	10	29	-842	-11	1	multi-exon	FALSE	canonical	1	6272	junction_1	56197.77006867228	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	377	2242	30.0	1	True	AATAAA	-19
PB.10323.5	chr6	-	3467	2	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	263	-12517	any annotated donor/acceptor	FALSE	canonical	1	1095	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	108	327	3045	3371	30.0	1849	False	NA	NA
PB.10323.4	chr6	-	3828	2	novel_not_in_catalog	PDE10A	novel	760	3	NA	NA	-24	-12517	any annotated donor/acceptor	FALSE	canonical	1	17955	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	3406	3732	30.0	67	False	NA	NA
PB.3524.12	chr14	+	3035	8	novel_in_catalog	EXD2	novel	3252	9	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	974	junction_1	59816.143601771546	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	289	1779	35.0	0	True	AATAAA	-16
PB.11074.1	chr8	-	1543	8	full-splice_match	GTF2E2	ENST00000355904.8	1762	8	19	200	19	-200	multi-exon	FALSE	canonical	1	332447	junction_7	96649.34384206672	NA	1	NA	TRUE	NA	NA	NA	A	coding	291	876	265	1140	30.0	0	True	AATAAA	-21
PB.9748.3	chr6	-	2352	2	full-splice_match	GFOD1	ENST00000603223.1	2388	2	31	5	31	2	multi-exon	FALSE	canonical	1	16647	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	742	1188	35.0	-32	True	AATAAA	-27
PB.9748.2	chr6	-	3687	2	novel_not_in_catalog	GFOD1	novel	8061	2	NA	NA	24	-19297	any annotated donor/acceptor	FALSE	canonical	1	6437	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	749	1318	25.0	-39	True	TTTAAA	-5
PB.9748.1	chr6	-	2360	2	full-splice_match	GFOD1	ENST00000379287.3	8751	2	633	5758	633	-233	multi-exon	FALSE	canonical	1	90036	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	33	1205	90.0	677	False	NA	NA
PB.9748.4	chr6	-	1536	2	full-splice_match	GFOD1	ENST00000379278.3	1529	2	-6	-1	-6	1	multi-exon	FALSE	canonical	1	2055	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	530	940	35.0	1410	False	AATAAA	-26
PB.5981.1	chr19	+	1924	5	full-splice_match	NFKBIB	ENST00000572515.5	1929	5	6	-1	6	1	multi-exon	FALSE	canonical	1	269080	junction_3	53006.215555347844	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	76	1092	95.0	-13	True	NA	NA
PB.5981.2	chr19	+	2250	5	novel_not_in_catalog	NFKBIB	novel	820	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	751	junction_2	132946.17322623468	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	713	1066	30.0	9	True	AATAAA	-23
PB.11297.8	chr8	-	2606	6	full-splice_match	EIF3E	ENST00000521440.5	746	6	-33	-1827	-12	1827	multi-exon	FALSE	canonical	1	85153	junction_1	599694.913033419	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	30	548	20.0	-15	False	AATAAA	-22
PB.10632.4	chr7	-	3412	32	novel_not_in_catalog	GSAP	novel	2618	9	NA	NA	-19	-11	any annotated donor/acceptor	FALSE	canonical	1	11201	junction_24	29653.894167908875	NA	23	4	TRUE	NA	NA	NA	C	coding	639	1920	898	2817	30.0	-71	True	ATTAAA	-4
PB.9696.20	chr6	-	1630	7	full-splice_match	SERPINB9	ENST00000380698.4	4118	7	-29	2517	-29	-2517	multi-exon	FALSE	canonical	1	208598	junction_6	78281.19813797351	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	120	1250	20.0	-1	True	AATAAA	-21
PB.10893.2	chr7	+	2671	11	full-splice_match	CASP2	ENST00000310447.9	4225	11	137	1417	-43	-290	multi-exon	FALSE	canonical	1	169856	junction_1	55962.82473606921	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	105	1463	10.0	1	True	NA	NA
PB.1107.16	chr1	-	4622	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	-17	3011	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	1	NA	TRUE	NA	NA	NA	C	coding	370	1113	393	1505	60.0	-27	True	NA	NA
PB.11297.9	chr8	-	2312	6	full-splice_match	EIF3E	ENST00000521440.5	746	6	-32	-1534	-11	1534	multi-exon	FALSE	canonical	1	85153	junction_1	599694.913033419	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	29	547	80.0	-14	False	ATTAAA	-27
PB.7117.3	chr2	+	5190	8	full-splice_match	ING5	ENST00000313552.10	5196	8	0	6	0	-6	multi-exon	FALSE	canonical	1	172908	junction_5	16900.000874290523	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	39	749	55.0	0	True	AATAAA	-16
PB.2312.1	chr11	+	974	5	full-splice_match	TRAPPC4	ENST00000533632.5	1759	5	323	462	-8	0	multi-exon	FALSE	canonical	1	835436	junction_3	98764.97399730078	NA	0	NA	TRUE	NA	NA	NA	A	coding	219	660	42	701	25.0	-11	True	AATAAA	-25
PB.1107.17	chr1	-	3786	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	113	2355	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	1	1	TRUE	NA	NA	NA	C	coding	370	1113	213	1325	20.0	224	False	ATTAAA	-19
PB.8161.1	chr3	-	1600	9	full-splice_match	TWF2	ENST00000305533.9	1718	9	114	4	-4	-4	multi-exon	FALSE	canonical	1	606529	junction_8	195945.38350886837	NA	0	NA	TRUE	NA	NA	NA	A	coding	349	1050	131	1180	15.0	-37	True	AATAAA	-14
PB.6441.1	chr2	+	6945	30	full-splice_match	PLEKHH2	ENST00000282406.8	6981	30	35	1	0	-1	multi-exon	TRUE	canonical	1	12798	junction_14	6978.40169923329	NA	9	NA	TRUE	NA	NA	NA	A	coding	1493	4482	76	4557	20.0	48	True	AATAAA	-16
PB.7180.1	chr20	-	2384	2	antisense	novelGene_MACROD2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	15161	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	124	375	708	1082	30.0	-147	False	AATAAA	-25
PB.9333.1	chr5	-	2334	10	novel_not_in_catalog	CCNH	novel	1664	10	NA	NA	7	1649	any annotated donor/acceptor	FALSE	canonical	1	8668	junction_1	209099.09497622543	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	104	1081	80.0	1	True	NA	NA
PB.279.16	chr1	-	2280	13	incomplete-splice_match	KIAA0319L	ENST00000325722.7	4789	21	10	18145	0	0	3prime_fragment	FALSE	canonical	1	122800	junction_12	78032.88444606045	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2055	226	2280	30.0	-1	True	NA	NA
PB.548.1	chr1	-	3127	12	full-splice_match	BCAR3	ENST00000260502.10	3171	12	40	4	40	-1	multi-exon	FALSE	canonical	1	120137	junction_11	52233.08451594245	NA	11	NA	TRUE	NA	NA	NA	A	coding	756	2271	411	2681	30.0	78	False	AATACA	-10
PB.7117.5	chr2	+	1716	8	full-splice_match	ING5	ENST00000313552.10	5196	8	0	3480	0	-1808	multi-exon	FALSE	canonical	1	172908	junction_5	16900.000874290523	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	39	749	15.0	0	True	AATGAA	-13
PB.11614.6	chr9	+	3373	16	full-splice_match	CEP78	ENST00000424347.6	11198	16	13	7812	3	-5	multi-exon	FALSE	canonical	1	89710	junction_1	36759.43836253336	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	277	2346	0.0	-6	True	NA	NA
PB.7117.4	chr2	+	2126	8	full-splice_match	ING5	ENST00000313552.10	5196	8	0	3070	0	-1398	multi-exon	FALSE	canonical	1	172908	junction_5	16900.000874290523	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	39	749	20.0	0	True	AATAAA	-17
PB.5865.12	chr19	-	3818	26	novel_not_in_catalog	ATP13A1	novel	2431	2	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	12384	junction_1	173734.8889756067	NA	12	1	TRUE	NA	NA	NA	C	coding	1197	3594	8	3601	30.0	2	True	AATAAA	-16
PB.5865.11	chr19	-	3788	26	novel_in_catalog	ATP13A1	novel	2431	2	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	127672	junction_13	162116.6262269037	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	1852	3570	30.0	-16	True	AATAAA	-17
PB.5865.10	chr19	-	3940	27	novel_not_in_catalog	ATP13A1	novel	2431	2	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	3062	junction_26	192449.14055717873	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	21	3722	30.0	-11	True	AATAAA	-17
PB.961.4	chr1	-	3589	11	novel_in_catalog	ABL2	novel	12144	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	46815	junction_10	35571.25438904285	NA	0	NA	TRUE	NA	NA	NA	C	coding	1146	3441	33	3473	30.0	-3	True	AATGAA	-27
PB.586.18	chr1	-	2902	11	incomplete-splice_match	CLCC1	ENST00000356970.6	4803	12	-17	4041	-17	1109	3prime_fragment	FALSE	canonical	1	65789	junction_10	91397.66534458088	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	126	1781	30.0	-22	True	AATAAA	-21
PB.1447.12	chr10	-	5424	1	genic	TYSND1	novel	NA	NA	NA	NA	-5	-3275	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	389	1170	96	1265	90.0	18	True	NA	NA
PB.1447.11	chr10	-	2426	4	novel_not_in_catalog	TYSND1	novel	3341	3	NA	NA	-13	-1230	any annotated donor/acceptor	FALSE	canonical	1	12650	junction_2	88166.40237011426	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	104	1528	40.0	10	True	AATAAA	-13
PB.1447.10	chr10	-	2524	4	full-splice_match	TYSND1	ENST00000287078.6	3644	4	-103	1223	-13	-1221	multi-exon	FALSE	canonical	1	116434	junction_3	51162.85675066326	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	104	1804	35.0	10	True	AATAAA	-22
PB.8208.1	chr3	-	4035	24	novel_in_catalog	CADPS	novel	5455	28	NA	NA	-77144	0	combination_of_known_junctions	TRUE	canonical	1	29906	junction_11	41488.776693460706	NA	1	NA	TRUE	NA	NA	NA	A	coding	975	2928	57	2984	30.0	NA	False	AATAAA	-15
PB.961.2	chr1	-	9196	12	full-splice_match	ABL2	ENST00000512653.5	3635	12	6	-5567	-6	2016	multi-exon	TRUE	canonical	1	31022	junction_11	39801.89810478643	NA	4	NA	TRUE	NA	NA	NA	C	coding	1167	3504	7	3510	100.0	4129	False	NA	NA
PB.860.22	chr1	+	1800	6	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	-779	combination_of_known_junctions	FALSE	canonical	1	7489	junction_3	200404.33566008497	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	55	942	40.0	1	True	AATAAA	-14
PB.5468.1	chr18	-	2227	7	full-splice_match	HDHD2	ENST00000588183.5	2224	7	-4	1	-4	-1	multi-exon	FALSE	canonical	1	63037	junction_5	138075.2991902325	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	445	954	5.0	-12	True	AATAAA	-16
PB.251.1	chr1	+	4830	11	full-splice_match	TXLNA	ENST00000373610.7	4854	11	23	1	23	-1	multi-exon	FALSE	canonical	1	274541	junction_1	118309.31834576683	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	101	1741	10.0	-34	True	AATAAA	-15
PB.9950.7	chr6	-	4223	15	novel_in_catalog	SRPK1	novel	4592	16	NA	NA	-7	-1	no_combination_of_known_junctions	FALSE	canonical	1	5417	junction_1	159905.79536165943	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	80	1954	35.0	11	False	AATAAA	-19
PB.8539.5	chr3	+	2855	12	full-splice_match	TTC14	ENST00000296015.8	2881	12	26	0	26	0	multi-exon	FALSE	canonical	1	100836	junction_11	68854.07274989573	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	107	2419	20.0	-43	True	ATTAAA	-23
PB.9950.4	chr6	-	4348	16	full-splice_match	SRPK1	ENST00000423325.6	4357	16	8	1	8	-1	multi-exon	FALSE	non_canonical	0	0	junction_14	159245.01459678067	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	160	2079	35.0	7	False	AATAAA	-19
PB.11.2	chr1	-	1841	10	full-splice_match	C1orf159	ENST00000421241.6	1841	10	4	-4	1	-1	multi-exon	FALSE	canonical	1	29762	junction_9	29348.12024813115	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	171	767	5.0	-6	True	TATAAA	-20
PB.251.4	chr1	+	4611	11	novel_not_in_catalog	TXLNA	novel	4854	11	NA	NA	41	-1	any annotated donor/acceptor	FALSE	canonical	1	6407	junction_3	184112.84984239965	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	83	1522	10.0	-16	True	AATAAA	-15
PB.6434.6	chr2	+	5490	23	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	9334	junction_9	114504.09833338062	NA	2	NA	TRUE	NA	NA	NA	C	coding	963	2892	261	3152	20.0	-1	True	AATAAA	-24
PB.251.5	chr1	+	4257	9	novel_in_catalog	TXLNA	novel	4854	11	NA	NA	59	-1	no_combination_of_known_junctions	FALSE	canonical	1	1094	junction_1	191318.09567298516	NA	4	NA	TRUE	NA	NA	NA	C	coding	371	1116	53	1168	10.0	2	True	AATAAA	-15
PB.3219.2	chr13	-	1937	12	novel_in_catalog	TGDS	novel	1905	12	NA	NA	1	-28	combination_of_known_junctions	FALSE	canonical	1	12952	junction_11	68237.68683974912	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	278	1234	75.0	0	True	TTTAAA	-24
PB.3219.3	chr13	-	1802	11	novel_in_catalog	TGDS	novel	1905	12	NA	NA	-16	-28	no_combination_of_known_junctions	FALSE	canonical	1	9378	junction_8	75410.5245711101	NA	19	3	TRUE	NA	NA	NA	C	coding	109	330	435	764	75.0	4	True	TTTAAA	-24
PB.3219.1	chr13	-	1784	12	full-splice_match	TGDS	ENST00000261296.6	1905	12	93	28	78	-28	multi-exon	FALSE	canonical	1	105561	junction_11	48338.00981312961	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	29	1081	75.0	-13	True	TTTAAA	-24
PB.12172.5	chrX	-	3509	15	full-splice_match	CHM	ENST00000357749.6	5442	15	4	1929	3	-1928	multi-exon	FALSE	canonical	1	76274	junction_6	25358.143795938813	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1962	27	1988	65.0	-5	True	NA	NA
PB.12172.4	chrX	-	4742	15	full-splice_match	CHM	ENST00000357749.6	5442	15	5	695	4	-694	multi-exon	FALSE	canonical	1	76274	junction_6	25358.143795938813	NA	1	NA	TRUE	NA	NA	NA	C	coding	653	1962	26	1987	40.0	-4	True	AATAAA	-19
PB.12172.7	chrX	-	3810	1	novel_in_catalog	CHM	novel	5442	15	NA	NA	4	-16790	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-4	True	NA	NA
PB.12172.6	chrX	-	3428	14	novel_not_in_catalog	CHM	novel	5442	15	NA	NA	7	-1928	any annotated donor/acceptor	FALSE	canonical	1	5291	junction_12	47052.43656431677	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	390	1907	65.0	-1	True	NA	NA
PB.1693.3	chr10	-	2304	6	full-splice_match	C10orf88	ENST00000481909.1	2482	6	176	2	84	-2	multi-exon	FALSE	canonical	1	91164	junction_3	10964.782708289298	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	50	1387	25.0	-13	True	AATAAA	-16
PB.12172.3	chrX	-	5362	14	novel_in_catalog	CHM	novel	5442	15	NA	NA	5	0	no_combination_of_known_junctions	TRUE	canonical	1	5291	junction_12	37509.471879756245	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	396	1913	20.0	-3	True	AATAAA	-19
PB.12172.2	chrX	-	5413	15	full-splice_match	CHM	ENST00000357749.6	5442	15	27	2	4	-1	multi-exon	FALSE	canonical	1	76274	junction_6	25358.143795938813	NA	2	1	TRUE	NA	NA	NA	C	coding	653	1962	4	1965	20.0	18	True	AATAAA	-18
PB.12172.8	chrX	-	1984	1	novel_in_catalog	CHM	novel	5442	15	NA	NA	-20	-18384	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	228	False	AATAAA	-37
PB.1693.8	chr10	-	2079	5	incomplete-splice_match	C10orf88	ENST00000481909.1	2482	6	176	5270	84	-4175	3prime_fragment	FALSE	canonical	1	91164	junction_2	11384.616682172484	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	50	1156	30.0	-13	True	NA	NA
PB.12253.5	chrX	+	3264	7	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	27	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	17698.722019933783	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	507	857	30.0	1	True	AATAAA	-30
PB.12253.4	chrX	+	2111	7	full-splice_match	XIAP	ENST00000371199.7	8591	7	144	6336	-24	392	multi-exon	FALSE	canonical	1	26338	junction_4	20610.490937060833	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	156	1649	20.0	21	True	AATAAA	-26
PB.12253.7	chrX	+	4065	8	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	-36	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	25531.88364634721	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	168	1661	30.0	9	True	AATAAA	-32
PB.12253.6	chrX	+	3641	7	full-splice_match	XIAP	ENST00000371199.7	8591	7	29	4921	29	1807	multi-exon	FALSE	canonical	1	26338	junction_4	20610.490937060833	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	271	1764	10.0	3	True	NA	NA
PB.12253.1	chrX	+	5367	8	novel_in_catalog	XIAP	novel	390	3	NA	NA	0	-2748	combination_of_known_junctions	FALSE	canonical	1	11668	junction_1	23022.231819682118	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	188	1681	95.0	-498	False	NA	NA
PB.12253.3	chrX	+	2551	7	full-splice_match	XIAP	ENST00000371199.7	8591	7	-4	6044	-4	684	multi-exon	FALSE	canonical	1	26338	junction_4	20610.490937060833	NA	2	NA	TRUE	NA	NA	NA	C	coding	497	1494	304	1797	15.0	-30	True	NA	NA
PB.12253.2	chrX	+	3325	7	full-splice_match	XIAP	ENST00000371199.7	8591	7	-22	5288	-22	1440	multi-exon	FALSE	canonical	1	26338	junction_4	20610.490937060833	NA	5	NA	TRUE	NA	NA	NA	C	coding	497	1494	322	1815	40.0	-48	True	AATAAA	-18
PB.812.13	chr1	-	5171	12	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-11	0	intron_retention	FALSE	canonical	1	87077	junction_3	126751.05447064921	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	39	1193	0.0	-3	True	AATAAA	-14
PB.6497.21	chr2	+	2329	7	incomplete-splice_match	EHBP1	ENST00000431489.5	5076	23	-3	214243	-3	5663	3prime_fragment	FALSE	canonical	1	135139	junction_1	51102.51324788244	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	610	1257	50.0	0	True	AATAAA	-23
PB.812.11	chr1	-	2764	13	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	12384	junction_8	141140.0489806136	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	748	1404	0.0	0	True	AATAAA	-14
PB.12253.9	chrX	+	3162	7	novel_not_in_catalog	XIAP	novel	390	3	NA	NA	-34	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	17698.722019933783	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	400	750	20.0	11	True	AATAAA	-40
PB.4119.1	chr16	+	854	5	full-splice_match	SNRNP25	ENST00000383018.7	1085	5	12	219	12	-4	multi-exon	FALSE	canonical	1	1006498	junction_1	100596.9090355166	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	150	548	55.0	0	True	AATAAA	-21
PB.4119.2	chr16	+	2909	3	full-splice_match	SNRNP25	ENST00000481947.1	1260	3	-1654	5	12	4	multi-exon	FALSE	canonical	1	1232057	junction_2	17723.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	58	177	150	326	50.0	0	True	AATAAA	-20
PB.4119.3	chr16	+	2250	4	full-splice_match	SNRNP25	ENST00000466183.1	1130	4	-1115	-5	16	-4	multi-exon	FALSE	canonical	1	1191581	junction_2	31018.09205752167	NA	0	NA	TRUE	NA	NA	NA	C	coding	58	177	146	322	55.0	4	True	AATAAA	-21
PB.12148.6	chrX	-	2197	16	full-splice_match	ABCB7	ENST00000373394.7	2353	16	-24	180	-18	0	multi-exon	FALSE	canonical	1	100120	junction_15	96689.11182331867	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2163	33	2195	65.0	-23	False	NA	NA
PB.12148.7	chrX	-	2223	6	incomplete-splice_match	ABCB7	ENST00000373394.7	2353	16	-2	20720	0	1482	3prime_fragment	FALSE	canonical	1	100120	junction_5	74443.82364011134	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	11	874	45.0	-1	True	NA	NA
PB.12148.4	chrX	-	2380	16	full-splice_match	ABCB7	ENST00000373394.7	2353	16	-16	-11	-10	7	multi-exon	FALSE	canonical	1	100120	junction_15	96689.11182331867	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	25	2283	30.0	-15	False	ATTAAA	-25
PB.12148.5	chrX	-	2235	16	novel_not_in_catalog	ABCB7	novel	4146	16	NA	NA	241	1	any annotated donor/acceptor	FALSE	canonical	1	1454	junction_15	114218.32460737444	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	257	2146	20.0	250	False	ATTAAA	-17
PB.12148.2	chrX	-	4111	16	full-splice_match	ABCB7	ENST00000645829.1	4146	16	44	-9	-10	9	multi-exon	FALSE	canonical	1	95279	junction_15	97477.77258491064	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	25	2286	15.0	-15	False	AATAAA	-28
PB.12148.3	chrX	-	3973	16	full-splice_match	ABCB7	ENST00000373394.7	2353	16	-19	-1601	-13	-129	multi-exon	FALSE	canonical	1	100120	junction_15	96689.11182331867	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	28	2286	30.0	-18	False	ATTAAA	-22
PB.12148.1	chrX	-	4596	16	full-splice_match	ABCB7	ENST00000645829.1	4146	16	58	-508	0	508	multi-exon	FALSE	canonical	1	95279	junction_15	97477.77258491064	NA	2	NA	TRUE	NA	NA	NA	C	coding	753	2262	11	2272	40.0	-1	True	AATAAA	-22
PB.3260.2	chr13	+	2351	6	novel_in_catalog	NAXD	novel	2311	7	NA	NA	41	5	intron_retention	FALSE	canonical	1	10529	junction_1	119276.05259162463	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	501	881	15.0	-76	False	ATTAAA	-25
PB.8136.1	chr3	-	3423	1	novel_in_catalog	NPRL2	novel	1643	10	NA	NA	0	-27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	115	348	2775	3122	100.0	-8	True	NA	NA
PB.530.6	chr1	+	3417	3	full-splice_match	LRRC8D	ENST00000394593.7	3345	3	-73	1	-73	-1	multi-exon	FALSE	canonical	1	12603	junction_1	90516.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	486	3062	15.0	-178	False	ATTAAA	-19
PB.530.7	chr1	+	3234	2	novel_in_catalog	AC093423.3	novel	654	4	NA	NA	188746	2750	no_combination_of_known_junctions	FALSE	canonical	1	682	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	858	2577	303	2879	15.0	-140	False	ATTAAA	-19
PB.530.4	chr1	+	3196	3	full-splice_match	LRRC8D	ENST00000337338.9	3950	3	143	611	143	-1	multi-exon	FALSE	canonical	1	42126	junction_1	75754.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	265	2841	15.0	-851	False	ATTAAA	-19
PB.3260.1	chr13	+	3269	9	novel_in_catalog	NAXD	novel	2311	7	NA	NA	20	1	intron_retention	FALSE	canonical	1	200086	junction_4	36248.58403355226	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	216	833	25.0	-97	False	ATTAAA	-21
PB.530.2	chr1	+	3230	2	novel_in_catalog	AC093423.3	novel	654	4	NA	NA	187856	2750	no_combination_of_known_junctions	FALSE	canonical	1	694	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	858	2577	299	2875	15.0	6	True	ATTAAA	-19
PB.530.3	chr1	+	3772	3	full-splice_match	LRRC8D	ENST00000337338.9	3950	3	-8	186	-8	-186	multi-exon	FALSE	canonical	1	42126	junction_1	75754.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2577	416	2992	65.0	-8	True	AATAAA	-34
PB.377.2	chr1	+	1333	10	full-splice_match	AKR1A1	ENST00000621846.4	1360	10	27	0	6	0	multi-exon	FALSE	canonical	1	217805	junction_1	520006.95952766814	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	264	1241	15.0	-16	True	AATAAA	-16
PB.279.18	chr1	-	2617	1	novel_in_catalog	KIAA0319L	novel	4789	21	NA	NA	1	1700	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	15	True	NA	NA
PB.530.8	chr1	+	3467	4	novel_not_in_catalog	AC093423.3	novel	654	4	NA	NA	188747	2749	any annotated donor/acceptor	FALSE	canonical	1	65	junction_1	89166.13208064047	NA	2	NA	TRUE	NA	NA	NA	B	coding	858	2577	537	3113	15.0	-139	False	ATTAAA	-18
PB.530.9	chr1	+	3246	3	novel_not_in_catalog	AC093423.3	novel	654	4	NA	NA	210021	2749	any annotated donor/acceptor	FALSE	canonical	1	9239	junction_1	92198.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	858	2577	316	2892	15.0	-496	False	ATTAAA	-18
PB.8962.8	chr4	+	2828	10	incomplete-splice_match	EXOSC9	ENST00000509980.5	1317	11	24	-233	-4	233	intron_retention	FALSE	canonical	1	465355	junction_3	74463.12006442112	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	84	1247	55.0	1	True	NA	NA
PB.8962.9	chr4	+	2657	10	incomplete-splice_match	EXOSC9	ENST00000509980.5	1317	11	24	-62	-4	62	intron_retention	FALSE	canonical	1	465355	junction_3	74463.12006442112	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	84	1247	65.0	1	True	NA	NA
PB.9746.1	chr6	+	3587	1	antisense	novelGene_TBC1D7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	156	471	42	512	95.0	7901	False	NA	NA
PB.9746.2	chr6	+	1601	1	antisense	novelGene_TBC1D7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	9887	False	NA	NA
PB.8962.2	chr4	+	1591	12	full-splice_match	EXOSC9	ENST00000243498.9	1481	12	4	-114	1	2	multi-exon	FALSE	canonical	1	465355	junction_3	94686.13838675142	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	105	1424	15.0	-20	True	AATAAA	-15
PB.8962.3	chr4	+	1421	13	full-splice_match	EXOSC9	ENST00000379663.7	1529	13	21	87	-5	-18	multi-exon	FALSE	canonical	1	64700	junction_10	206926.21118099615	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1335	85	1419	75.0	0	True	NA	NA
PB.11091.3	chr8	+	4066	4	novel_not_in_catalog	BAG4	novel	530	4	NA	NA	207	-8	any annotated donor/acceptor	FALSE	canonical	1	1910	junction_2	107856.214954087	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	703	1266	35.0	-49	True	AATAAA	-22
PB.8962.1	chr4	+	1363	12	full-splice_match	EXOSC9	ENST00000243498.9	1481	12	32	86	3	-17	multi-exon	FALSE	canonical	1	465355	junction_3	94686.13838675142	NA	3	NA	TRUE	NA	NA	NA	C	coding	429	1287	77	1363	75.0	8	True	NA	NA
PB.8962.6	chr4	+	4116	10	incomplete-splice_match	EXOSC9	ENST00000379663.7	1529	13	14	-7	9	5	intron_retention	FALSE	canonical	1	465355	junction_3	74463.12006442112	NA	4	NA	TRUE	NA	NA	NA	C	coding	387	1164	92	1255	20.0	-7	True	ATTAAA	-24
PB.8962.7	chr4	+	3783	11	novel_in_catalog	EXOSC9	novel	1481	12	NA	NA	-4	4	intron_retention	FALSE	canonical	1	465355	junction_3	98565.28479140108	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	84	1247	20.0	1	True	ATTAAA	-23
PB.8962.4	chr4	+	1353	12	full-splice_match	EXOSC9	ENST00000243498.9	1481	12	8	120	0	-51	multi-exon	FALSE	canonical	1	465355	junction_3	94686.13838675142	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1251	101	1351	70.0	-16	True	AGTAAA	-42
PB.8962.5	chr4	+	3903	11	novel_in_catalog	EXOSC9	novel	1481	12	NA	NA	3	0	intron_retention	FALSE	canonical	1	465355	junction_3	98565.28479140108	NA	2	NA	TRUE	NA	NA	NA	C	coding	387	1164	98	1261	10.0	-13	True	AATAAA	-13
PB.8061.1	chr3	-	5136	3	full-splice_match	KIAA1143	ENST00000296121.5	5122	3	-19	5	-19	-5	multi-exon	FALSE	canonical	1	334	junction_2	32300.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	154	465	80	544	25.0	-20	False	NA	NA
PB.5432.2	chr18	-	2139	6	full-splice_match	CHST9	ENST00000618847.4	11388	6	-47	9296	-47	0	multi-exon	FALSE	canonical	1	16661	junction_5	8612.848713404874	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	326	1657	25.0	97	False	GATAAA	-15
PB.5432.1	chr18	-	2834	6	full-splice_match	CHST9	ENST00000618847.4	11388	6	-39	8593	-39	703	multi-exon	FALSE	canonical	1	16661	junction_5	8612.848713404874	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	318	1649	40.0	-28	True	ATTAAA	-12
PB.7614.8	chr22	-	2451	3	full-splice_match	RTL10	ENST00000407472.5	6523	3	-26	4098	-26	1753	multi-exon	FALSE	canonical	1	101801	junction_2	1291.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	426	1520	10.0	-49	False	NA	NA
PB.7614.7	chr22	-	2538	3	full-splice_match	RTL10	ENST00000328554.8	6619	3	-8	4089	-8	1754	multi-exon	FALSE	canonical	1	29040	junction_2	37672.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	512	1606	10.0	25	False	NA	NA
PB.7614.5	chr22	-	2946	3	full-splice_match	RTL10	ENST00000407472.5	6523	3	48	3529	-8	2322	multi-exon	FALSE	canonical	1	101801	junction_2	1291.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	352	1446	15.0	25	False	ATTAAA	-15
PB.7614.4	chr22	-	3318	3	full-splice_match	RTL10	ENST00000407472.5	6523	3	-45	3250	-45	2601	multi-exon	FALSE	canonical	1	101801	junction_2	1291.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	445	1539	80.0	-68	False	NA	NA
PB.7614.3	chr22	-	3360	3	full-splice_match	RTL10	ENST00000416337.1	730	3	-29	-2601	-5	2601	multi-exon	FALSE	canonical	1	7130	junction_2	48627.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	487	1581	80.0	28	False	NA	NA
PB.7614.2	chr22	-	3377	3	full-splice_match	RTL10	ENST00000328554.8	6619	3	0	3242	0	2601	multi-exon	TRUE	canonical	1	29040	junction_2	37672.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	504	1598	80.0	-25	True	NA	NA
PB.9472.4	chr5	+	3082	19	full-splice_match	KIF20A	ENST00000394894.7	3201	19	122	-3	-40	3	multi-exon	FALSE	canonical	1	290110	junction_1	51903.30691399176	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	105	2777	65.0	8	True	ATTAAA	-21
PB.8006.20	chr3	+	2031	14	incomplete-splice_match	PDCD6IP	ENST00000307296.7	6161	18	256	15804	-3	-1431	3prime_fragment	FALSE	canonical	1	21513	junction_12	256153.57001611358	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1908	122	2029	65.0	-26	True	NA	NA
PB.8006.21	chr3	+	5262	16	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	2	531	intron_retention	FALSE	canonical	1	21513	junction_11	351568.4726912937	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	3027	4646	35.0	-2	True	AATAAA	-7
PB.8006.22	chr3	+	5893	18	full-splice_match	PDCD6IP	ENST00000457054.6	5962	18	63	6	4	-1	multi-exon	FALSE	canonical	1	21513	junction_12	363270.1432218769	NA	2	NA	TRUE	NA	NA	NA	C	coding	873	2622	96	2717	25.0	0	True	AATAAA	-15
PB.6181.9	chr19	+	2411	4	novel_not_in_catalog	ZNF766	novel	6298	4	NA	NA	1	-163	any annotated donor/acceptor	FALSE	canonical	1	1035	junction_1	62976.02058455795	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	716	2011	55.0	7	True	NA	NA
PB.6181.8	chr19	+	2214	5	novel_in_catalog	ZNF766	novel	6298	4	NA	NA	0	-165	combination_of_known_junctions	FALSE	canonical	1	1284	junction_1	66032.97585818391	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	365	1816	65.0	6	True	NA	NA
PB.11738.1	chr9	-	1479	3	full-splice_match	HDHD3	ENST00000374180.3	1497	3	13	5	13	-5	multi-exon	FALSE	canonical	1	55255	junction_2	139596.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	549	1304	20.0	-1	True	AATAAA	-35
PB.6181.1	chr19	+	2716	2	novel_in_catalog	ZNF766	novel	6298	4	NA	NA	0	-4	intron_retention	FALSE	canonical	1	3466	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	31	1194	20.0	0	True	AATAAA	-18
PB.6181.3	chr19	+	2807	5	novel_not_in_catalog	ZNF766	novel	6298	4	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	55719.1504646293	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	28	1434	20.0	0	True	AATAAA	-21
PB.6181.2	chr19	+	2010	4	full-splice_match	ZNF766	ENST00000439461.5	6298	4	3	4285	3	0	multi-exon	FALSE	canonical	1	109779	junction_1	14974.749435855902	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	41	1447	80.0	3	True	NA	NA
PB.6181.5	chr19	+	1707	3	full-splice_match	ZNF766	ENST00000593703.1	554	3	0	-1153	0	-163	multi-exon	FALSE	canonical	1	5061	junction_1	70193.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	15	1307	55.0	0	True	NA	NA
PB.6181.4	chr19	+	2146	4	full-splice_match	ZNF766	ENST00000439461.5	6298	4	16	4136	0	149	multi-exon	FALSE	canonical	1	109779	junction_1	14974.749435855902	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	28	1434	75.0	0	True	NA	NA
PB.6181.7	chr19	+	1828	4	full-splice_match	ZNF766	ENST00000439461.5	6298	4	20	4450	-2	-165	multi-exon	FALSE	canonical	1	109779	junction_1	14974.749435855902	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	24	1430	65.0	4	True	NA	NA
PB.6181.6	chr19	+	2956	4	full-splice_match	ZNF766	ENST00000439461.5	6298	4	18	3324	2	-2	multi-exon	FALSE	canonical	1	109779	junction_1	14974.749435855902	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	26	1432	20.0	2	True	AATAAA	-20
PB.2765.1	chr12	+	2775	1	full-splice_match	ATXN7L3B	ENST00000519948.3	7604	1	-20	4849	-20	-4849	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-28	True	NA	NA
PB.6497.25	chr2	+	4771	23	novel_not_in_catalog	EHBP1	novel	4108	23	NA	NA	26427	-4	intron_retention	FALSE	canonical	1	517	junction_1	96554.14081396154	NA	1	NA	TRUE	NA	NA	NA	C	coding	1076	3231	558	3788	25.0	-3816	False	AATAAA	-20
PB.2765.3	chr12	+	3072	1	full-splice_match	ATXN7L3B	ENST00000519948.3	7604	1	544	3988	544	-3988	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1726	False	AATAAA	-36
PB.2765.2	chr12	+	4735	1	full-splice_match	ATXN7L3B	ENST00000519948.3	7604	1	2	2867	2	-2867	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-6	True	NA	NA
PB.2765.4	chr12	+	2140	1	full-splice_match	ATXN7L3B	ENST00000519948.3	7604	1	1476	3988	1476	-3988	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-794	False	AATAAA	-36
PB.11091.5	chr8	+	1833	4	full-splice_match	BAG4	ENST00000432471.6	1943	4	241	-131	230	131	multi-exon	FALSE	canonical	1	9645	junction_1	91787.6391980726	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	42	1307	20.0	-26	True	AATATA	-13
PB.9408.4	chr5	-	2149	6	full-splice_match	DTWD2	ENST00000510708.5	2307	6	0	158	0	-158	multi-exon	FALSE	canonical	1	27478	junction_3	7904.694488719979	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	35	931	15.0	-12	True	ATTAAA	-15
PB.6905.1	chr2	+	4673	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	35200	junction_1	74319.8387745306	NA	1	NA	TRUE	NA	NA	NA	C	coding	791	2376	203	2578	20.0	0	True	NA	NA
PB.6990.3	chr2	-	8103	45	full-splice_match	FN1	ENST00000421182.5	8103	45	-1	1	0	-1	multi-exon	FALSE	canonical	1	1096730	junction_8	2611224.2613735846	NA	1	NA	TRUE	NA	NA	NA	C	coding	2240	6723	267	6989	35.0	-1	True	AATAAA	-33
PB.12042.14	chrX	-	2545	17	full-splice_match	SLC9A7	ENST00000616978.4	10024	17	29	7450	29	-407	multi-exon	FALSE	canonical	1	48302	junction_10	43330.115697507375	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	115	2295	80.0	-26	True	NA	NA
PB.6990.1	chr2	-	8388	46	full-splice_match	FN1	ENST00000336916.8	8435	46	1	46	0	-42	multi-exon	FALSE	canonical	1	4033929	junction_15	2269059.901717288	NA	2	NA	TRUE	NA	NA	NA	C	coding	2355	7068	266	7333	35.0	0	True	AATAAA	-10
PB.12042.11	chrX	-	2412	18	novel_in_catalog	SLC9A7	novel	10024	17	NA	NA	52	2	combination_of_known_junctions	FALSE	canonical	1	22698	junction_1	46749.12277518301	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	92	2272	35.0	-3	True	CATAAA	-32
PB.12042.10	chrX	-	3925	17	full-splice_match	SLC9A7	ENST00000616978.4	10024	17	29	6070	29	-4	multi-exon	FALSE	canonical	1	48302	junction_10	43330.115697507375	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	115	2295	30.0	-26	True	AATACA	-16
PB.12042.13	chrX	-	2536	16	novel_in_catalog	SLC9A7	novel	10024	17	NA	NA	6	-379	no_combination_of_known_junctions	FALSE	canonical	1	38629	junction_4	47408.31361298002	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	138	2258	25.0	44	False	NA	NA
PB.12042.12	chrX	-	2404	17	novel_in_catalog	SLC9A7	novel	10024	17	NA	NA	-5	-3	no_combination_of_known_junctions	FALSE	canonical	1	22698	junction_1	50025.914381323404	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	149	2269	45.0	33	False	CATAAA	-27
PB.5379.3	chr18	-	9529	63	full-splice_match	LAMA1	ENST00000389658.3	9657	63	-18	146	-18	-1	multi-exon	FALSE	canonical	1	31835	junction_52	30481.423377350042	NA	0	NA	TRUE	NA	NA	NA	C	coding	3075	9228	113	9340	25.0	-3	True	ATTAAA	-13
PB.5379.2	chr18	-	10591	62	novel_not_in_catalog	LAMA1	novel	9657	63	NA	NA	9	0	intron_retention	FALSE	canonical	1	8071	junction_7	31518.08642923471	NA	23	2	TRUE	NA	NA	NA	C	coding	2561	7686	2716	10401	25.0	-9	True	ATTAAA	-14
PB.5379.1	chr18	-	6034	39	novel_not_in_catalog	LAMA1	novel	9657	63	NA	NA	19	0	intron_retention	FALSE	non_canonical	0	0	junction_28	37989.98787245357	NA	1	1	TRUE	NA	NA	NA	C	coding	1922	5769	76	5844	25.0	1	True	ATTAAA	-14
PB.6242.2	chr19	+	2725	4	full-splice_match	ZNF17	ENST00000307658.11	2716	4	5	-14	-5	14	multi-exon	FALSE	canonical	1	33257	junction_1	8459.695121903364	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	259	2253	35.0	8	True	NA	NA
PB.5379.4	chr18	-	7419	49	incomplete-splice_match	LAMA1	ENST00000389658.3	9657	63	16	24112	16	-456	3prime_fragment	FALSE	canonical	1	31835	junction_38	18550.45598154568	NA	2	NA	TRUE	NA	NA	NA	C	coding	2357	7074	79	7152	30.0	-2	True	ATTAAA	-11
PB.4829.4	chr17	-	2440	2	novel_not_in_catalog	AKAP10	novel	4072	15	NA	NA	4	-11994	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-7	True	NA	NA
PB.9603.2	chr5	+	719	6	full-splice_match	PTTG1	ENST00000352433.9	753	6	33	1	0	-1	multi-exon	FALSE	canonical	1	617072	junction_3	501698.00108894194	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	49	657	10.0	0	True	AATAAA	-20
PB.8195.6	chr3	+	5374	22	novel_in_catalog	SLMAP	novel	556	2	NA	NA	39	-5	combination_of_known_junctions	FALSE	canonical	1	72009	junction_11	100060.9010671595	NA	1	NA	TRUE	NA	NA	NA	C	coding	787	2364	1179	3542	35.0	-40	True	ATTAAA	-12
PB.8195.7	chr3	+	2039	8	incomplete-splice_match	SLMAP	ENST00000295951.7	5433	22	39	70835	39	-32873	3prime_fragment	FALSE	canonical	1	93980	junction_1	59304.34088871487	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	1179	1895	35.0	-40	True	AATAAA	-16
PB.4829.1	chr17	-	3613	15	full-splice_match	AKAP10	ENST00000225737.10	4072	15	-5	464	-5	-464	multi-exon	FALSE	canonical	1	126233	junction_6	34948.162944114345	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	230	2152	30.0	-16	True	NA	NA
PB.4829.2	chr17	-	3323	15	full-splice_match	AKAP10	ENST00000225737.10	4072	15	9	740	0	-740	multi-exon	FALSE	canonical	1	126233	junction_6	34948.162944114345	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	216	2138	75.0	-2	True	AAGAAA	-38
PB.4829.3	chr17	-	2845	2	incomplete-splice_match	AKAP10	ENST00000576896.5	565	4	-15	7425	-6	-3009	3prime_fragment	FALSE	canonical	1	156464	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-17	False	NA	NA
PB.8195.8	chr3	+	4992	24	novel_in_catalog	SLMAP	novel	556	2	NA	NA	45	-308	combination_of_known_junctions	FALSE	canonical	1	49539	junction_12	102912.66454321229	NA	0	NA	TRUE	NA	NA	NA	C	coding	825	2478	1173	3650	45.0	-34	True	AATAAA	-18
PB.8195.9	chr3	+	2197	11	incomplete-splice_match	SLMAP	ENST00000295951.7	5433	22	48	64559	48	-26597	3prime_fragment	FALSE	canonical	1	93980	junction_1	59028.787725058355	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1026	1170	2195	55.0	-31	True	AAAAAG	-8
PB.4103.5	chr15	+	3743	10	full-splice_match	LRRC28	ENST00000301981.7	5971	10	119	2109	-5	351	multi-exon	FALSE	canonical	1	90620	junction_1	24718.619491297555	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	122	1225	35.0	-7	True	TATAAA	-17
PB.4103.4	chr15	+	3877	1	novel_in_catalog	LRRC28	novel	581	3	NA	NA	-5	-999	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-7	True	NA	NA
PB.6528.8	chr2	+	2863	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	20	1308	20	1098	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	232	1779	15.0	2	True	NA	NA
PB.6528.9	chr2	+	3462	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	21	708	21	-708	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	231	1778	55.0	3	True	NA	NA
PB.4103.1	chr15	+	4691	10	full-splice_match	LRRC28	ENST00000301981.7	5971	10	72	1208	-15	-1206	multi-exon	FALSE	canonical	1	90620	junction_1	24718.619491297555	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	169	1272	40.0	-8190	False	AATAAA	-14
PB.4103.3	chr15	+	3720	9	novel_in_catalog	LRRC28	novel	581	3	NA	NA	1	352	intron_retention	FALSE	canonical	1	22170	junction_2	48489.96965207727	NA	1	NA	TRUE	NA	NA	NA	C	coding	213	642	560	1201	35.0	-24	True	TATAAA	-18
PB.4103.2	chr15	+	1437	10	full-splice_match	LRRC28	ENST00000301981.7	5971	10	102	4432	1	1	multi-exon	FALSE	canonical	1	90620	junction_1	24718.619491297555	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	139	1242	5.0	-24	True	AATATA	-21
PB.6528.2	chr2	+	3393	13	novel_in_catalog	GMCL1	novel	4191	14	NA	NA	5	-708	no_combination_of_known_junctions	FALSE	canonical	1	1970	junction_6	36078.82370549547	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	247	1047	55.0	-13	True	NA	NA
PB.10758.11	chr7	+	2812	7	novel_not_in_catalog	ARMC10	novel	2266	4	NA	NA	-9	3663	intron_retention	FALSE	non_canonical	0	0	junction_6	313830.17545875383	NA	1	1	TRUE	NA	NA	NA	C	coding	308	927	115	1041	40.0	-9	True	ATTAAA	-20
PB.6528.1	chr2	+	4142	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	19	30	19	-30	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	233	1780	45.0	1	True	AATAAA	-19
PB.6528.6	chr2	+	3684	14	novel_not_in_catalog	GMCL1	novel	4191	14	NA	NA	19	-549	any annotated donor/acceptor	FALSE	canonical	1	4764	junction_4	33951.51178044234	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	840	1841	100.0	1	True	NA	NA
PB.6528.7	chr2	+	3524	14	novel_not_in_catalog	GMCL1	novel	4191	14	NA	NA	20	-708	any annotated donor/acceptor	FALSE	canonical	1	4764	junction_4	33951.51178044234	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	839	1840	55.0	2	True	NA	NA
PB.6528.4	chr2	+	3624	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	18	549	18	-549	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	234	1781	100.0	0	True	NA	NA
PB.6528.5	chr2	+	2920	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	34	1237	-10	1169	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	218	1765	25.0	16	True	NA	NA
PB.5969.2	chr19	-	4248	6	novel_not_in_catalog	AC093227.2	novel	572	5	NA	NA	-565	-6489	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	16943.393938641693	NA	2	NA	TRUE	NA	NA	NA	A	coding	695	2088	494	2581	35.0	-7	True	AATAAA	-18
PB.11247.1	chr8	+	2594	1	novel_in_catalog	NDUFAF6	novel	949	8	NA	NA	0	-8822	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	136	411	2003	2413	95.0	-11	True	NA	NA
PB.11091.7	chr8	+	4193	5	full-splice_match	BAG4	ENST00000287322.4	4453	5	256	4	256	-4	multi-exon	FALSE	canonical	1	99660	junction_1	51015.94930203201	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	16	1389	20.0	0	True	AATAAA	-26
PB.10758.12	chr7	+	1957	6	full-splice_match	ARMC10	ENST00000441711.6	2524	6	280	287	-7	-278	multi-exon	FALSE	canonical	1	12980	junction_1	324221.0667673524	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	113	1039	80.0	-7	True	NA	NA
PB.297.10	chr1	-	2023	14	incomplete-splice_match	GNL2	ENST00000373062.7	2334	16	-15	1501	-1	-1496	3prime_fragment	FALSE	canonical	1	402620	junction_6	191559.28507278793	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1908	115	2022	65.0	-2	True	NA	NA
PB.11050.15	chr8	+	4032	30	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	8129	junction_1	168453.11203713054	NA	1	NA	TRUE	NA	NA	NA	C	coding	967	2904	247	3150	5.0	-9	True	ATTAAA	-20
PB.807.10	chr1	-	3624	10	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28527	-44728	intron_retention	FALSE	canonical	1	11591	junction_1	256615.68139188652	NA	1	NA	TRUE	NA	NA	NA	B	coding	739	2220	1202	3421	15.0	1	True	NA	NA
PB.2771.2	chr12	-	3488	2	full-splice_match	BBS10	ENST00000650064.1	3536	2	-21	69	6	-69	multi-exon	FALSE	canonical	1	52743	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	79	2250	30.0	-22	True	ATTAAA	-22
PB.2771.3	chr12	-	3362	2	full-splice_match	BBS10	ENST00000650064.1	3536	2	-30	204	-3	-204	multi-exon	FALSE	canonical	1	52743	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	88	2259	30.0	-31	True	AATACA	-16
PB.2771.1	chr12	-	3862	1	novel_in_catalog	BBS10	novel	3595	2	NA	NA	6	-69	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	675	2028	597	2624	30.0	-22	True	ATTAAA	-22
PB.2771.4	chr12	-	3724	1	novel_in_catalog	BBS10	novel	3595	2	NA	NA	6	-207	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	675	2028	597	2624	35.0	-22	True	AATACA	-13
PB.2771.5	chr12	-	3243	2	novel_not_in_catalog	BBS10	novel	3595	2	NA	NA	6	-227	any annotated donor/acceptor	FALSE	canonical	1	4502	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	79	2163	30.0	-22	True	AAAACA	-24
PB.9553.28	chr5	-	2280	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	108	171	-47	-13	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	481	1494	15.0	-9	True	GATAAA	-22
PB.7527.4	chr21	+	3425	14	novel_not_in_catalog	MX2	novel	3042	14	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	2261	junction_11	86546.44849344427	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	102	2717	25.0	-2	True	AATAAA	-23
PB.9553.29	chr5	-	2446	11	full-splice_match	CSNK1A1	ENST00000515768.5	1098	11	-481	-867	-48	68	multi-exon	FALSE	canonical	1	219238	junction_7	505850.07598532585	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	482	1579	35.0	-10	True	ATTAAA	-20
PB.11661.1	chr9	+	3550	5	full-splice_match	ZNF169	ENST00000395395.6	1986	5	-15	-1549	-15	1549	multi-exon	FALSE	canonical	1	7708	junction_1	15351.018948265291	NA	0	NA	TRUE	NA	NA	NA	A	coding	603	1812	106	1917	85.0	-22	True	NA	NA
PB.6497.29	chr2	+	3311	14	novel_not_in_catalog	EHBP1	novel	4108	23	NA	NA	2457	-3	intron_retention	FALSE	canonical	1	7583	junction_9	120674.02685468586	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	321	2327	25.0	NA	False	AATAAA	-21
PB.807.16	chr1	-	2633	10	novel_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28527	-44729	no_combination_of_known_junctions	FALSE	canonical	1	9108	junction_5	226266.797176734	NA	0	NA	TRUE	NA	NA	NA	B	coding	721	2166	266	2431	15.0	1	True	NA	NA
PB.5.1	chr1	+	2644	3	full-splice_match	LINC01128	ENST00000441765.5	750	3	-51	-1843	8	1561	multi-exon	FALSE	canonical	1	9324	junction_2	26976.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	122	369	949	1317	50.0	-3969	False	AATATA	-6
PB.6752.1	chr2	+	6589	5	incomplete-splice_match	MGAT5	ENST00000281923.3	8144	16	158490	0	158490	0	5prime_fragment	FALSE	canonical	1	213317	junction_2	18471.083400818698	NA	1	NA	TRUE	NA	NA	NA	A	coding	243	732	85	816	25.0	-92	False	AATAAA	-14
PB.3425.1	chr14	+	3847	1	novel_in_catalog	ATL1	novel	644	3	NA	NA	81	-51449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-492	False	NA	NA
PB.8728.1	chr4	+	4393	3	novel_in_catalog	DTHD1	novel	3819	10	NA	NA	782	1645	no_combination_of_known_junctions	FALSE	canonical	1	542	junction_1	2554.5	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	7743	False	NA	NA
PB.470.26	chr1	+	6280	12	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-8	15	intron_retention	FALSE	canonical	1	61194	junction_9	656353.6452029047	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	4167	5069	35.0	-19	True	AATAAA	-29
PB.4968.4	chr17	-	2006	4	novel_not_in_catalog	CCR7	novel	2173	3	NA	NA	0	-39	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	204984.54893695985	NA	1	1	TRUE	NA	NA	NA	C	coding	378	1137	64	1200	90.0	-1	True	GATAAA	-28
PB.4968.5	chr17	-	5532	1	novel_in_catalog	CCR7	novel	2173	3	NA	NA	6	-4830	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	67	204	136	339	60.0	18	False	AAAACA	-42
PB.4968.1	chr17	-	2134	3	full-splice_match	CCR7	ENST00000246657.2	2173	3	0	39	0	-39	multi-exon	FALSE	canonical	1	403981	junction_1	28120.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	64	1200	90.0	-1	True	GATAAA	-28
PB.4968.2	chr17	-	2084	2	full-splice_match	CCR7	ENST00000578085.1	787	2	-13	-1284	0	-39	multi-exon	FALSE	canonical	1	2558	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	203	1150	90.0	-1	True	GATAAA	-28
PB.4968.3	chr17	-	1989	1	incomplete-splice_match	CCR7	ENST00000246657.2	2173	3	9711	4	5252	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	315	948	73	1020	20.0	9710	False	AAAAAG	-25
PB.3058.1	chr13	+	2687	5	novel_in_catalog	AL359736.1	novel	4157	16	NA	NA	180977	-42262	no_combination_of_known_junctions	FALSE	canonical	1	12988	junction_4	21908.55427110607	NA	0	NA	TRUE	NA	NA	NA	B	coding	737	2214	368	2581	80.0	-129	False	NA	NA
PB.3058.3	chr13	+	5289	13	full-splice_match	SPATA13	ENST00000382108.7	8463	13	4	3170	-2	0	multi-exon	FALSE	canonical	1	36577	junction_1	35900.584281360316	NA	1	NA	TRUE	NA	NA	NA	C	coding	1277	3834	325	4158	85.0	0	True	NA	NA
PB.3058.2	chr13	+	8456	13	full-splice_match	SPATA13	ENST00000382108.7	8463	13	4	3	-2	-1	multi-exon	FALSE	canonical	1	36577	junction_1	35900.584281360316	NA	0	NA	TRUE	NA	NA	NA	C	coding	1277	3834	325	4158	20.0	0	True	ATTAAA	-17
PB.3058.5	chr13	+	2947	10	full-splice_match	SPATA13	ENST00000399949.6	3026	10	79	0	48	0	multi-exon	FALSE	canonical	1	24500	junction_1	36097.602547182	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	92	1816	85.0	-18	True	NA	NA
PB.3058.4	chr13	+	6188	10	full-splice_match	SPATA13	ENST00000399949.6	3026	10	6	-3168	6	0	multi-exon	FALSE	canonical	1	24500	junction_1	36097.602547182	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	165	1889	20.0	7	True	ATTAAA	-18
PB.3058.6	chr13	+	4222	10	novel_not_in_catalog	AL359736.1	novel	4157	16	NA	NA	291074	-13965	any annotated donor/acceptor	FALSE	canonical	1	5268	junction_9	49171.51268798522	NA	5	NA	TRUE	NA	NA	NA	B	coding	555	1668	85	1752	30.0	-11	True	ATTAAA	-12
PB.4716.5	chr17	+	2821	6	novel_in_catalog	XAF1	novel	818	3	NA	NA	-20	345	intron_retention	FALSE	canonical	1	48289	junction_3	59329.7317755609	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	1671	1985	20.0	-20	False	NA	NA
PB.4716.4	chr17	+	2831	7	full-splice_match	XAF1	ENST00000361842.7	3623	7	185	607	-21	-607	multi-exon	FALSE	canonical	1	84748	junction_4	51900.45429366576	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	55	960	90.0	5	True	NA	NA
PB.4716.7	chr17	+	3420	7	full-splice_match	XAF1	ENST00000361842.7	3623	7	199	4	-7	-4	multi-exon	FALSE	canonical	1	84748	junction_4	51900.45429366576	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	41	946	25.0	-7	True	AATAAA	-12
PB.4716.6	chr17	+	2803	7	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	-20	-224	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	65214.124010617685	NA	16	1	TRUE	NA	NA	NA	C	coding	301	906	54	959	80.0	-20	False	NA	NA
PB.4716.1	chr17	+	1637	7	full-splice_match	XAF1	ENST00000361842.7	3623	7	202	1784	-4	200	multi-exon	FALSE	canonical	1	84748	junction_4	51900.45429366576	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	38	943	65.0	-4	True	NA	NA
PB.4716.3	chr17	+	3430	8	novel_in_catalog	XAF1	novel	818	3	NA	NA	0	-132	combination_of_known_junctions	FALSE	canonical	1	48289	junction_4	64282.557929179886	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	27	521	50.0	7	True	AATAAA	-9
PB.4716.2	chr17	+	1810	8	novel_in_catalog	XAF1	novel	818	3	NA	NA	-25	200	combination_of_known_junctions	FALSE	canonical	1	48289	junction_4	64282.557929179886	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	59	553	65.0	1	True	NA	NA
PB.7631.4	chr22	+	4557	20	novel_in_catalog	AC002470.2	novel	3442	22	NA	NA	2838	901	intron_retention	FALSE	canonical	1	155620	junction_13	72919.10788787418	NA	0	NA	TRUE	NA	NA	NA	B	coding	568	1707	73	1779	60.0	3	True	AATAAA	-24
PB.4716.9	chr17	+	2402	7	full-splice_match	XAF1	ENST00000576724.5	1010	7	-13	-1379	-4	420	multi-exon	FALSE	canonical	1	48289	junction_4	54977.62026093486	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	38	532	25.0	-4	True	NA	NA
PB.4716.8	chr17	+	3278	7	full-splice_match	XAF1	ENST00000361842.7	3623	7	213	132	0	-132	multi-exon	FALSE	canonical	1	84748	junction_4	51900.45429366576	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	27	932	50.0	7	True	AATAAA	-9
PB.496.1	chr1	-	3335	21	full-splice_match	TTLL7	ENST00000260505.12	7976	21	-31	4672	-13	-2	multi-exon	FALSE	canonical	1	38570	junction_20	30099.031795723928	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	410	3073	40.0	-41	True	AATAAA	-23
PB.5610.2	chr19	-	3070	6	novel_not_in_catalog	DOHH	novel	2031	5	NA	NA	258	-1	any annotated donor/acceptor	FALSE	canonical	1	1280	junction_2	92331.35683092716	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	195	686	15.0	-9	True	ATTAAA	-15
PB.7721.9	chr22	-	4418	4	incomplete-splice_match	PRR14L	ENST00000327423.10	10826	9	-6	32270	3	3110	3prime_fragment	TRUE	canonical	1	28036	junction_3	52895.8722460143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1407	4221	197	4417	60.0	-6	True	AATATA	-7
PB.9553.27	chr5	-	2304	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-27	3790	-27	67	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	461	1438	35.0	11	True	ATTAAA	-19
PB.723.1	chr1	+	4595	10	full-splice_match	RPRD2	ENST00000401000.8	7605	10	0	3010	0	0	multi-exon	FALSE	canonical	1	72096	junction_3	61775.210560567655	NA	1	NA	TRUE	NA	NA	NA	C	coding	1435	4308	66	4373	100.0	-8906	False	NA	NA
PB.470.24	chr1	+	2082	12	incomplete-splice_match	SRSF11	ENST00000370950.7	3784	13	15736	1797	-9	257	5prime_fragment	FALSE	canonical	1	634180	junction_2	492723.3546397222	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	178	1632	20.0	-20	True	ATTAAA	-14
PB.6396.4	chr2	+	1746	3	full-splice_match	YPEL5	ENST00000261353.8	2182	3	-13	449	7	-449	multi-exon	FALSE	canonical	1	721018	junction_1	38249.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	140	505	35.0	-21	True	ATTAAA	-21
PB.40.1	chr1	+	2411	5	full-splice_match	TPRG1L	ENST00000378344.6	2414	5	1	2	1	-2	multi-exon	TRUE	canonical	1	302942	junction_1	137761.30797755768	NA	1	NA	TRUE	NA	NA	NA	A	coding	272	819	71	889	25.0	-31	True	ATTAAA	-16
PB.3431.8	chr14	+	2538	1	novel_in_catalog	TMX1	novel	943	3	NA	NA	-11	-3075	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-24	True	NA	NA
PB.2879.12	chr12	-	3687	10	novel_in_catalog	CORO1C	novel	3892	11	NA	NA	0	2	intron_retention	FALSE	canonical	1	5495	junction_8	383549.58324750315	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	96	1397	25.0	-1	True	GATAAA	-14
PB.3431.2	chr14	+	2587	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	48	1360	-34	532	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	78	920	40.0	-47	True	NA	NA
PB.3431.3	chr14	+	3946	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	49	0	-33	0	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	77	919	25.0	-46	True	AATAAA	-18
PB.175.5	chr1	+	3980	12	full-splice_match	NIPAL3	ENST00000374399.8	1711	12	2	-2271	2	-1398	multi-exon	FALSE	canonical	1	184044	junction_1	48053.6719540189	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	367	1587	100.0	-6	True	NA	NA
PB.175.4	chr1	+	4199	12	full-splice_match	NIPAL3	ENST00000374399.8	1711	12	-1	-2487	-1	-1182	multi-exon	FALSE	canonical	1	184044	junction_1	48053.6719540189	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	370	1590	75.0	-9	True	NA	NA
PB.3431.6	chr14	+	4043	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	57	-105	-25	105	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	4	NA	TRUE	NA	NA	NA	C	coding	280	843	69	911	50.0	-38	True	AATAAA	-26
PB.3431.7	chr14	+	3027	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	60	908	-22	-908	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	66	908	35.0	-35	True	AATACA	-13
PB.3431.4	chr14	+	4123	7	novel_in_catalog	TMX1	novel	943	3	NA	NA	15	384	intron_retention	FALSE	canonical	1	473688	junction_3	132180.97477784852	NA	1	NA	TRUE	NA	NA	NA	C	coding	129	390	2215	2604	45.0	2	True	AATAAA	-17
PB.3431.5	chr14	+	5401	8	full-splice_match	TMX1	ENST00000457354.6	3995	8	56	-1462	-26	1462	multi-exon	FALSE	canonical	1	473688	junction_4	126384.97673943914	NA	3	NA	TRUE	NA	NA	NA	C	coding	280	843	70	912	55.0	-39	True	NA	NA
PB.9673.6	chr5	-	4472	21	full-splice_match	TBC1D9B	ENST00000355235.7	5119	21	-38	685	-35	-8	multi-exon	FALSE	canonical	1	349198	junction_20	153588.17432377403	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	74	3775	60.0	-5	True	AATAAA	-7
PB.10829.1	chr7	+	691	2	full-splice_match	ATP6V1F	ENST00000249289.4	704	2	16	-3	16	2	multi-exon	FALSE	canonical	1	882030	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	119	360	64	423	20.0	-27	True	ATTAAA	-22
PB.9673.1	chr5	-	5131	21	full-splice_match	TBC1D9B	ENST00000355235.7	5119	21	-8	-4	-5	4	multi-exon	FALSE	canonical	1	349198	junction_20	153588.17432377403	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	44	3745	25.0	25	True	NA	NA
PB.9673.2	chr5	-	5665	20	novel_not_in_catalog	MRNIP	novel	562	3	NA	NA	-45716	-8790	intron_retention	FALSE	canonical	1	15976	junction_3	214762.16871259824	NA	3	NA	TRUE	NA	NA	NA	C	coding	705	2118	2173	4290	40.0	0	True	NA	NA
PB.9673.3	chr5	-	5346	22	novel_not_in_catalog	MRNIP	novel	562	3	NA	NA	-45709	-8790	any annotated donor/acceptor	FALSE	canonical	1	9541	junction_4	245152.6882154575	NA	1	NA	TRUE	NA	NA	NA	C	coding	973	2922	62	2983	40.0	7	True	NA	NA
PB.7721.6	chr22	-	10306	8	novel_in_catalog	PRR14L	novel	1849	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	13854	junction_7	41418.396095238175	NA	2	NA	TRUE	NA	NA	NA	C	coding	1989	5970	160	6129	35.0	-8	True	AATAAA	-19
PB.9673.8	chr5	-	2063	9	novel_not_in_catalog	TBC1D9B	novel	5119	21	NA	NA	-18	889	any annotated donor/acceptor	FALSE	canonical	1	2271	junction_1	286294.3307419831	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	57	1337	55.0	12	True	NA	NA
PB.8601.24	chr3	+	5989	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	64	275	-8	10	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	4	NA	TRUE	NA	NA	NA	C	coding	960	2883	171	3053	25.0	0	True	ATTAAA	-26
PB.1878.1	chr11	+	9449	13	full-splice_match	QSER1	ENST00000399302.7	9271	13	-189	11	-189	-7	multi-exon	FALSE	canonical	1	31547	junction_1	51735.481408569	NA	0	NA	TRUE	NA	NA	NA	C	coding	1864	5595	70	5664	60.0	-55	True	ATTAAA	-18
PB.1878.3	chr11	+	2330	4	incomplete-splice_match	QSER1	ENST00000399302.7	9271	13	-177	46739	-177	1529	3prime_fragment	FALSE	canonical	1	31547	junction_1	41519.013189407844	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2271	58	2328	60.0	-43	True	NA	NA
PB.1878.2	chr11	+	4944	8	incomplete-splice_match	QSER1	ENST00000399302.7	9271	13	-184	22273	-184	-11071	3prime_fragment	FALSE	canonical	1	31547	junction_1	60102.117372800414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1626	4878	65	4942	65.0	-50	True	AGTAAA	-16
PB.1878.4	chr11	+	2114	3	full-splice_match	QSER1	ENST00000527250.5	448	3	-137	-1529	-123	1529	multi-exon	FALSE	canonical	1	4624	junction_2	13461.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2109	4	2112	60.0	11	True	NA	NA
PB.1421.1	chr10	-	3280	21	novel_in_catalog	ANK3	novel	16874	44	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	1	1713	junction_20	68775.12219681984	NA	0	NA	TRUE	NA	NA	NA	A	coding	992	2979	156	3134	85.0	883	False	NA	NA
PB.7141.6	chr20	-	2112	7	novel_in_catalog	PCED1A	novel	531	2	NA	NA	0	-13	intron_retention	FALSE	canonical	1	193232	junction_6	146728.1296635228	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	1072	1977	35.0	-56	True	AATAAA	-12
PB.7141.5	chr20	-	1837	8	novel_in_catalog	PCED1A	novel	531	2	NA	NA	-4	-9	combination_of_known_junctions	FALSE	canonical	1	26709	junction_5	194158.1749170043	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	538	1698	25.0	-39	True	AATAAA	-16
PB.7141.2	chr20	-	2610	1	novel_in_catalog	PCED1A	novel	531	2	NA	NA	438	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	133	402	14	415	25.0	3222	False	AATAAA	-20
PB.9372.2	chr5	+	2693	3	full-splice_match	C5orf30	ENST00000319933.6	3049	3	66	290	66	-1	multi-exon	FALSE	canonical	1	79186	junction_1	58246.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	243	863	10.0	2	True	AATAAA	-16
PB.7141.1	chr20	-	1994	8	full-splice_match	PCED1A	ENST00000360652.6	2016	8	19	3	-2	-3	multi-exon	FALSE	canonical	1	178851	junction_5	160502.317161225	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	536	1849	20.0	-37	True	AATAAA	-22
PB.10527.1	chr7	+	728	5	full-splice_match	PPIA	ENST00000468812.5	2238	5	1	1509	0	-16	multi-exon	FALSE	canonical	1	14156	junction_1	899338.8626004661	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	45	542	75.0	0	True	NA	NA
PB.10527.3	chr7	+	2392	6	full-splice_match	PPIA	ENST00000489459.5	907	6	1	-1486	0	-1	multi-exon	FALSE	canonical	1	73959	junction_4	792397.3992452525	NA	3	NA	TRUE	NA	NA	NA	C	coding	105	318	381	698	20.0	1	True	AATAAA	-20
PB.10527.2	chr7	+	3206	4	novel_in_catalog	PPIA	novel	570	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	73959	junction_2	953884.9446532963	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	2510	2995	20.0	0	True	AATAAA	-19
PB.10527.5	chr7	+	2236	5	full-splice_match	PPIA	ENST00000468812.5	2238	5	2	0	0	0	multi-exon	FALSE	canonical	1	14156	junction_1	899338.8626004661	NA	4	NA	TRUE	NA	NA	NA	C	coding	165	498	44	541	15.0	1	True	AATAAA	-21
PB.10527.4	chr7	+	2302	6	full-splice_match	PPIA	ENST00000355968.10	818	6	1	-1485	0	-1	multi-exon	FALSE	canonical	1	12101	junction_2	825152.5439207953	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	291	608	20.0	1	True	AATAAA	-20
PB.10959.4	chr8	+	3176	1	full-splice_match	AC004908.2	ENST00000609090.1	574	1	-722	-1880	-722	1880	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	132	399	1	399	45.0	4	True	AATAAA	-17
PB.1326.3	chr10	-	1656	12	novel_not_in_catalog	DNAJC1	novel	2106	12	NA	NA	796	-41	any annotated donor/acceptor	FALSE	canonical	1	47	junction_11	144166.0616051062	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	72	1547	85.0	1148	False	NA	NA
PB.1326.1	chr10	-	1627	12	full-splice_match	DNAJC1	ENST00000376980.7	2106	12	438	41	112	-41	multi-exon	FALSE	canonical	1	201123	junction_4	87932.76353757665	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	298	1518	85.0	464	False	NA	NA
PB.11194.5	chr8	+	4493	13	novel_not_in_catalog	HNF4G	novel	470	5	NA	NA	-235	-20	any annotated donor/acceptor	FALSE	canonical	1	748	junction_1	11115.360711333462	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	540	1766	70.0	23	True	AATAAA	-7
PB.8853.80	chr4	-	3349	19	incomplete-splice_match	SEC31A	ENST00000505984.5	3596	25	-74	24641	-8	0	3prime_fragment	FALSE	canonical	1	315490	junction_7	214863.76636245553	NA	1	NA	TRUE	NA	NA	NA	C	coding	838	2517	140	2656	85.0	9346	False	TTTAAA	-4
PB.8853.81	chr4	-	4112	19	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	4	-13	intron_retention	FALSE	canonical	1	6687	junction_12	298955.91812665394	NA	1	NA	TRUE	NA	NA	NA	C	coding	283	852	2581	3432	70.0	9332	False	AAGAAA	-39
PB.8853.82	chr4	-	3290	12	novel_in_catalog	SEC31A	novel	4012	25	NA	NA	-5	1279	intron_retention	FALSE	canonical	1	27952	junction_11	286047.5835801039	NA	3	NA	TRUE	NA	NA	NA	C	coding	509	1530	396	1925	100.0	0	True	NA	NA
PB.8853.83	chr4	-	3035	12	full-splice_match	SEC31A	ENST00000436790.6	1717	12	-39	-1279	-9	1279	multi-exon	FALSE	canonical	1	670877	junction_11	139592.3340063445	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	141	1670	100.0	9345	False	NA	NA
PB.8853.84	chr4	-	2639	12	full-splice_match	SEC31A	ENST00000436790.6	1717	12	43	-965	-5	965	multi-exon	FALSE	canonical	1	670877	junction_11	139592.3340063445	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	59	1588	70.0	0	True	GATAAA	-26
PB.8853.85	chr4	-	1578	12	full-splice_match	SEC31A	ENST00000436790.6	1717	12	32	107	1	-107	multi-exon	FALSE	canonical	1	670877	junction_11	139592.3340063445	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1509	70	1578	35.0	-11	True	NA	NA
PB.8853.86	chr4	-	1417	11	incomplete-splice_match	SEC31A	ENST00000436790.6	1717	12	59	1210	-5	-1210	3prime_fragment	FALSE	canonical	1	670877	junction_10	143188.9121855809	NA	3	NA	TRUE	NA	NA	NA	C	coding	458	1374	43	1416	50.0	16	True	NA	NA
PB.8853.87	chr4	-	2199	3	full-splice_match	THAP9-AS1	ENST00000512932.5	971	3	15	-1243	15	2	multi-exon	FALSE	canonical	1	50172	junction_1	174852.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	24	True	ATTAAA	-19
PB.8853.88	chr4	-	2132	5	full-splice_match	THAP9-AS1	ENST00000504520.6	2770	5	420	218	19	-218	multi-exon	FALSE	canonical	1	43463	junction_2	135154.28938693547	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	28	True	NA	NA
PB.8853.89	chr4	-	2246	5	full-splice_match	THAP9-AS1	ENST00000504520.6	2770	5	-16	540	-16	-4	multi-exon	FALSE	canonical	1	43463	junction_2	135154.28938693547	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-408	False	AATAAA	-19
PB.5439.8	chr18	+	2622	8	full-splice_match	RNF138	ENST00000261593.7	3570	8	108	840	61	6	multi-exon	FALSE	canonical	1	55586	junction_3	42399.456749985344	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	351	1088	30.0	17	True	AATAAA	-21
PB.11489.6	chr9	-	2050	13	full-splice_match	PLAA	ENST00000520884.5	2041	13	-9	0	-9	0	multi-exon	FALSE	canonical	1	230625	junction_12	57464.84040384075	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	198	2027	40.0	-12	True	AATAAA	-23
PB.11489.5	chr9	-	2788	13	full-splice_match	PLAA	ENST00000520884.5	2041	13	51	-798	51	605	multi-exon	FALSE	canonical	1	230625	junction_12	57464.84040384075	NA	7	NA	TRUE	NA	NA	NA	C	coding	609	1830	138	1967	10.0	-12	True	NA	NA
PB.470.23	chr1	+	2824	12	incomplete-splice_match	SRSF11	ENST00000370951.5	2385	13	15778	-383	-9	-1	5prime_fragment	FALSE	canonical	1	634180	junction_2	523693.3416773346	NA	2	1	TRUE	NA	NA	NA	C	coding	483	1452	178	1629	30.0	-20	True	AATAAA	-13
PB.11489.3	chr9	-	2835	14	novel_not_in_catalog	PLAA	novel	4234	14	NA	NA	-9	539	any annotated donor/acceptor	FALSE	canonical	1	5234	junction_5	111480.13324355152	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	198	1874	20.0	-12	True	AATAAA	-15
PB.11489.2	chr9	-	2955	15	novel_not_in_catalog	PLAA	novel	4234	14	NA	NA	58	539	any annotated donor/acceptor	TRUE	canonical	1	5463	junction_4	137098.8858683649	NA	2	NA	TRUE	NA	NA	NA	C	coding	524	1575	131	1705	20.0	-5	True	AATAAA	-15
PB.11489.1	chr9	-	2581	14	full-splice_match	PLAA	ENST00000397292.7	4234	14	304	1349	74	451	multi-exon	FALSE	canonical	1	230625	junction_13	55216.964530839614	NA	1	NA	TRUE	NA	NA	NA	C	coding	795	2388	115	2502	55.0	11	True	NA	NA
PB.11506.1	chr9	+	1784	5	full-splice_match	UBE2R2	ENST00000263228.3	4075	5	112	2179	112	-2179	multi-exon	FALSE	canonical	1	1007909	junction_2	60585.30033968636	NA	0	NA	TRUE	NA	NA	NA	A	coding	238	717	80	796	10.0	-211	False	AATACA	-9
PB.11194.6	chr8	+	4185	10	full-splice_match	HNF4G	ENST00000396423.2	4209	10	5	19	5	-19	multi-exon	FALSE	canonical	1	2409	junction_1	8682.230385628789	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	72	1457	70.0	5	True	AATAAA	-8
PB.10958.1	chr8	-	5539	2	novel_in_catalog	RPL23AP53	novel	736	3	NA	NA	-75	4836	no_combination_of_known_junctions	FALSE	canonical	1	15384	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.635.37	chr1	-	3595	20	full-splice_match	CSDE1	ENST00000358528.8	4076	20	-19	500	0	-105	multi-exon	FALSE	canonical	1	483912	junction_15	1625555.3695188337	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	447	2843	80.0	-1	True	TTTAAA	-8
PB.6905.3	chr2	+	4566	8	full-splice_match	MFSD6	ENST00000392328.5	4797	8	-9	240	-9	-38	multi-exon	FALSE	canonical	1	12580	junction_1	91357.06175334274	NA	2	NA	TRUE	NA	NA	NA	C	coding	791	2376	334	2709	45.0	-9	True	AATAAA	-17
PB.2845.1	chr12	+	2115	2	full-splice_match	AC012555.1	ENST00000551650.1	674	2	18	-1459	18	1459	multi-exon	FALSE	canonical	1	741	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.5439.9	chr18	+	3193	7	novel_not_in_catalog	AC011825.3	novel	565	5	NA	NA	73072	19781	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	65560.01395095947	NA	3	NA	TRUE	NA	NA	NA	B	coding	151	456	413	868	35.0	-1	True	ATTAAA	-15
PB.10872.1	chr7	+	3708	19	full-splice_match	TRIM24	ENST00000343526.8	8410	19	288	4414	187	-6	multi-exon	FALSE	canonical	1	138849	junction_1	62152.001312418644	NA	0	NA	TRUE	NA	NA	NA	A	coding	961	2886	195	3080	40.0	-5861	False	ATTAAA	-11
PB.8361.7	chr3	-	2341	10	novel_not_in_catalog	SLC12A8	novel	2831	8	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	1757	junction_6	47553.120221910845	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	577	1608	60.0	-3	True	NA	NA
PB.1435.1	chr10	-	4176	18	full-splice_match	RUFY2	ENST00000602465.5	3863	18	13	-326	0	18	multi-exon	FALSE	canonical	1	55825	junction_17	27046.59765719988	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	89	1909	30.0	-1	True	AATAAA	-32
PB.1435.2	chr10	-	4064	17	novel_in_catalog	RUFY2	novel	2110	19	NA	NA	2	10	combination_of_known_junctions	FALSE	canonical	1	18270	junction_14	38230.597946407324	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	87	1805	30.0	1	True	AATAAA	-24
PB.1435.3	chr10	-	4195	18	novel_not_in_catalog	RUFY2	novel	2110	19	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	45348	junction_6	32217.827896043837	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	89	1321	45.0	-1	True	AATAAA	-33
PB.1435.4	chr10	-	3724	18	novel_not_in_catalog	RUFY2	novel	2110	19	NA	NA	2	-167	any annotated donor/acceptor	FALSE	canonical	1	45348	junction_6	32217.827896043837	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	87	1319	30.0	1	True	AATAAA	-17
PB.1435.5	chr10	-	3678	18	full-splice_match	RUFY2	ENST00000602465.5	3863	18	-4	189	0	-189	multi-exon	FALSE	canonical	1	55825	junction_17	27046.59765719988	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	106	1926	70.0	-18	True	NA	NA
PB.1435.6	chr10	-	2566	18	full-splice_match	RUFY2	ENST00000602465.5	3863	18	-14	1311	-10	7	multi-exon	FALSE	canonical	1	55825	junction_17	27046.59765719988	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	116	1936	5.0	-28	True	ATTAAA	-22
PB.1435.7	chr10	-	2295	19	novel_not_in_catalog	RUFY2	novel	2110	19	NA	NA	2	218	any annotated donor/acceptor	FALSE	canonical	1	740	junction_3	47665.1538129841	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	104	1861	30.0	-16	True	ATTAAA	-24
PB.1435.8	chr10	-	2154	18	full-splice_match	RUFY2	ENST00000602465.5	3863	18	15	1694	2	212	multi-exon	FALSE	canonical	1	55825	junction_17	27046.59765719988	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	87	1907	30.0	1	True	ATTAAA	-18
PB.6810.3	chr2	-	2653	26	novel_not_in_catalog	FAP	novel	697	4	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	4801	junction_14	37807.794014335195	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	101	2359	15.0	17	True	AATAAA	-19
PB.1842.1	chr11	-	1508	12	full-splice_match	SAAL1	ENST00000524803.5	1582	12	21	53	-1	0	multi-exon	FALSE	canonical	1	217527	junction_10	52311.52475331348	NA	0	NA	TRUE	NA	NA	NA	A	coding	474	1425	30	1454	30.0	-4	True	AATAAA	-19
PB.8361.9	chr3	-	2187	5	novel_in_catalog	SLC12A8	novel	2831	8	NA	NA	101	0	no_combination_of_known_junctions	FALSE	canonical	1	4572	junction_1	39033.82756661202	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	121	1359	60.0	-12	False	NA	NA
PB.8361.8	chr3	-	2232	9	novel_in_catalog	SLC12A8	novel	2831	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	11515	junction_8	39993.01160964719	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	96	1499	60.0	-4	True	NA	NA
PB.9496.11	chr5	+	3537	10	incomplete-splice_match	ANKHD1	ENST00000394723.7	2135	11	-25	6085	15	1219	3prime_fragment	FALSE	canonical	1	347257	junction_2	106986.46827427509	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	140	1936	95.0	-4	True	NA	NA
PB.9496.10	chr5	+	4549	26	incomplete-splice_match	ANKHD1	ENST00000421134.5	4814	27	-21	2041	15	-14	3prime_fragment	FALSE	canonical	1	111724	junction_11	120162.32455744853	NA	0	NA	TRUE	NA	NA	NA	C	coding	1470	4410	140	4549	80.0	-4	True	NA	NA
PB.9496.13	chr5	+	4504	26	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	18	-14	combination_of_known_junctions	FALSE	canonical	1	62638	junction_2	138427.49519955346	NA	0	NA	TRUE	NA	NA	NA	C	coding	1456	4368	137	4504	80.0	-1	True	NA	NA
PB.9496.12	chr5	+	4490	25	incomplete-splice_match	ANKHD1	ENST00000297183.10	7606	33	17	15317	17	-14	3prime_fragment	FALSE	canonical	1	124883	junction_10	119709.97112837156	NA	0	NA	TRUE	NA	NA	NA	C	coding	1451	4353	138	4490	80.0	-2	True	NA	NA
PB.9496.15	chr5	+	4446	25	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	-17	-14	combination_of_known_junctions	FALSE	canonical	1	62638	junction_2	139104.02374571434	NA	0	NA	TRUE	NA	NA	NA	C	coding	1437	4311	136	4446	80.0	0	True	NA	NA
PB.9496.14	chr5	+	5714	24	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	18	-14	intron_retention	FALSE	canonical	1	124883	junction_10	118432.62717089888	NA	2	NA	TRUE	NA	NA	NA	C	coding	716	2151	137	2287	80.0	-1	True	NA	NA
PB.9496.17	chr5	+	2623	15	incomplete-splice_match	ANKHD1	ENST00000297183.10	7606	33	19	42656	-17	215	3prime_fragment	FALSE	canonical	1	124883	junction_10	143705.801415849	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2487	136	2622	65.0	0	True	NA	NA
PB.9496.16	chr5	+	2853	10	incomplete-splice_match	ANKHD1	ENST00000394723.7	2135	11	-21	6765	-17	539	3prime_fragment	FALSE	canonical	1	347257	junction_2	106986.46827427509	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	136	1932	30.0	0	True	AATAAA	-18
PB.9496.19	chr5	+	2072	12	novel_not_in_catalog	ANKHD1	novel	2064	10	NA	NA	-17	1	any annotated donor/acceptor	FALSE	canonical	1	8851	junction_11	171009.48861412957	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	136	2049	5.0	0	True	AATAAA	-23
PB.9496.18	chr5	+	2571	10	incomplete-splice_match	ANKHD1	ENST00000394723.7	2135	11	-21	7047	-17	257	3prime_fragment	FALSE	canonical	1	347257	junction_2	106986.46827427509	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	136	1932	20.0	0	True	TATAAA	-16
PB.11244.6	chr8	+	2272	16	full-splice_match	INTS8	ENST00000523321.5	2916	16	-31	675	-14	-675	multi-exon	FALSE	canonical	1	164843	junction_1	66478.89646443365	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	157	2247	25.0	-20	True	AATAAA	-21
PB.1205.1	chr1	+	1217	5	full-splice_match	NTPCR	ENST00000366628.9	6311	5	13	5081	-3	50	multi-exon	FALSE	canonical	1	312497	junction_1	134774.30567155595	NA	0	NA	TRUE	NA	NA	NA	A	coding	190	573	75	647	25.0	26	True	AATAAA	-32
PB.10143.18	chr6	-	2837	7	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	12	1316	any annotated donor/acceptor	FALSE	canonical	1	2633	junction_3	155360.0862973928	NA	2	1	TRUE	NA	NA	NA	C	coding	346	1041	75	1115	50.0	-7	True	TATAAA	-16
PB.6787.8	chr2	-	2841	8	novel_not_in_catalog	NR4A2	novel	3472	8	NA	NA	-87	0	any annotated donor/acceptor	FALSE	canonical	1	4342	junction_2	89506.63520473479	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	455	2197	85.0	3	True	AATAAA	-33
PB.6691.1	chr2	-	7704	48	full-splice_match	ANAPC1	ENST00000341068.7	8262	48	498	60	-11	-60	multi-exon	TRUE	canonical	1	1813	junction_22	120117.30437350209	NA	0	NA	TRUE	NA	NA	NA	C	coding	1934	5805	306	6110	15.0	0	True	TTTAAA	-33
PB.937.8	chr1	+	5622	23	novel_not_in_catalog	SUCO	novel	5916	23	NA	NA	23	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	75509.12875840448	NA	0	NA	TRUE	NA	NA	NA	B	coding	1251	3756	296	4051	15.0	-9	True	AATAAA	-20
PB.11244.2	chr8	+	3198	26	incomplete-splice_match	INTS8	ENST00000523731.5	4633	27	-37	5100	-28	0	3prime_fragment	FALSE	canonical	1	164843	junction_1	133047.54358408877	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	171	3101	30.0	-69	False	TATAAA	-22
PB.6556.1	chr2	+	4644	5	novel_in_catalog	DGUOK	novel	1029	6	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	454885	junction_2	418031.42029547255	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	7	True	AATAAA	-26
PB.9169.5	chr5	+	2848	19	novel_not_in_catalog	TARS	novel	2534	20	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	3340	junction_11	462274.54678171244	NA	1	NA	TRUE	NA	NA	NA	C	coding	425	1278	111	1388	80.0	-16	True	AAAAAG	-43
PB.10465.12	chr7	-	2279	9	novel_not_in_catalog	SCRN1	novel	5257	8	NA	NA	-32	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	239711.548724158	NA	5	NA	TRUE	NA	NA	NA	C	coding	414	1245	191	1435	70.0	-70	True	NA	NA
PB.937.3	chr1	+	5540	23	novel_not_in_catalog	SUCO	novel	5916	23	NA	NA	13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	69127.31309423287	NA	12	2	TRUE	NA	NA	NA	B	coding	802	2409	1561	3969	15.0	-398	False	AATAAA	-20
PB.608.3	chr1	-	3341	4	novel_not_in_catalog	LRIF1	novel	3475	4	NA	NA	44	20680	any annotated donor/acceptor	FALSE	canonical	1	1765	junction_1	49104.52681327411	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	234	2174	40.0	0	True	NA	NA
PB.937.5	chr1	+	5520	20	novel_not_in_catalog	SUCO	novel	5916	23	NA	NA	-139	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	86409.51746925044	NA	5	1	TRUE	NA	NA	NA	B	coding	691	2076	1874	3949	15.0	-649	False	AATAAA	-20
PB.937.4	chr1	+	5511	22	incomplete-splice_match	SUCO	ENST00000608151.5	5790	23	657	0	12	0	5prime_fragment	FALSE	canonical	1	41456	junction_2	66033.09766474548	NA	0	NA	TRUE	NA	NA	NA	B	coding	1210	3633	307	3939	15.0	-20	True	AATAAA	-21
PB.937.7	chr1	+	5068	18	novel_in_catalog	SUCO	novel	5916	23	NA	NA	-104	0	no_combination_of_known_junctions	FALSE	canonical	1	551	junction_1	75665.76225986745	NA	0	NA	TRUE	NA	NA	NA	B	coding	969	2910	587	3496	15.0	1	True	AATAAA	-21
PB.937.6	chr1	+	5399	21	novel_not_in_catalog	SUCO	novel	5916	23	NA	NA	29	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	78766.6823329985	NA	6	1	TRUE	NA	NA	NA	B	coding	802	2409	1418	3826	10.0	-3	True	AATAAA	-22
PB.11806.6	chr9	+	1774	7	full-splice_match	CDK9	ENST00000373264.4	2463	7	5	684	5	-684	multi-exon	FALSE	canonical	1	621788	junction_5	122950.44219612316	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	96	1214	10.0	20	True	ATTAAA	-41
PB.10808.5	chr7	-	2324	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	143	41	117	-41	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	72	755	70.0	200	False	AATAAA	-14
PB.10808.4	chr7	-	2789	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	-14	-267	-14	267	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	5	NA	TRUE	NA	NA	NA	C	coding	227	684	229	912	10.0	-41	True	TATAAA	-32
PB.10808.6	chr7	-	2517	10	novel_not_in_catalog	FAM3C	novel	2508	10	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	157	junction_7	10488.001749206473	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	226	909	15.0	-1	True	AATAAA	-22
PB.10808.1	chr7	-	3532	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	-2	-1022	-2	1022	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	217	900	55.0	-29	True	AATAAA	-24
PB.11225.6	chr8	+	3073	7	novel_not_in_catalog	OSGIN2	novel	3990	6	NA	NA	106	-945	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121157.50266595131	NA	11	1	TRUE	NA	NA	NA	C	coding	549	1650	48	1697	50.0	3	True	ATTAAA	-35
PB.10808.3	chr7	-	2926	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	24	-442	-2	442	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	191	874	35.0	-3	True	ATTAAA	-16
PB.10808.2	chr7	-	3087	10	full-splice_match	FAM3C	ENST00000359943.7	2508	10	26	-605	0	605	multi-exon	FALSE	canonical	1	157	junction_7	10545.594110139196	NA	2	NA	TRUE	NA	NA	NA	C	coding	227	684	189	872	25.0	-1	True	ATTAAA	-16
PB.10808.9	chr7	-	2523	8	novel_not_in_catalog	FAM3C	novel	2508	10	NA	NA	-8248	-7	any annotated donor/acceptor	FALSE	canonical	1	201	junction_2	11721.698492582907	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	453	920	10.0	NA	False	AATAAA	-17
PB.8812.11	chr4	-	2433	11	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	487454.60186894325	NA	1	1	TRUE	NA	NA	NA	C	coding	318	957	348	1304	25.0	1	True	AATAAA	-32
PB.1589.1	chr10	+	5363	1	genic	AL391684.1	novel	NA	NA	NA	NA	-18	-1835	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-8152	False	AATAAA	-14
PB.1589.2	chr10	+	7144	1	genic	AL391684.1	novel	NA	NA	NA	NA	54	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	5	18	562	579	35.0	37	True	AATAAA	-19
PB.6787.2	chr2	-	3635	8	full-splice_match	NR4A2	ENST00000339562.8	3472	8	-170	7	-166	-7	multi-exon	FALSE	canonical	1	78091	junction_7	64206.55093572014	NA	2	NA	TRUE	NA	NA	NA	C	coding	598	1797	534	2330	25.0	9651	False	AATAAA	-12
PB.10646.3	chr7	-	1409	5	novel_in_catalog	TMEM243	novel	1063	4	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	1	10259	junction_4	237067.57511361607	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	1	True	AATAAA	-21
PB.10646.5	chr7	-	1915	4	full-splice_match	TMEM243	ENST00000257637.7	1063	4	-856	4	-2	-2	multi-exon	FALSE	canonical	1	489960	junction_3	46797.123931094546	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-12	True	AATAAA	-16
PB.10646.4	chr7	-	1271	5	full-splice_match	TMEM243	ENST00000433078.5	1273	5	4	-2	4	0	multi-exon	FALSE	canonical	1	96610	junction_4	200328.93138208345	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	439	795	5.0	-6	True	AATAAA	-20
PB.10646.6	chr7	-	1964	1	novel_in_catalog	TMEM243	novel	1273	5	NA	NA	10	875	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	121	366	1075	1440	85.0	0	True	NA	NA
PB.3305.8	chr14	+	2221	9	full-splice_match	TOX4	ENST00000455393.5	2000	9	4	-225	4	225	multi-exon	FALSE	canonical	1	7909	junction_3	163789.77046964807	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	372	1847	30.0	1	True	ATTAAA	-32
PB.3305.9	chr14	+	2298	9	full-splice_match	TOX4	ENST00000448790.6	4534	9	47	2189	-1	227	multi-exon	FALSE	canonical	1	52098	junction_8	171169.08649376317	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	57	1922	30.0	17	True	ATTAAA	-34
PB.9035.7	chr4	-	3821	11	novel_in_catalog	PLRG1	novel	3351	15	NA	NA	-1	10	intron_retention	FALSE	canonical	1	537600	junction_6	133408.45643994986	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	1556	2383	10.0	11	True	AATAAA	-17
PB.3305.1	chr14	+	3590	5	novel_not_in_catalog	TOX4	novel	724	4	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_2	145602.68950533675	NA	3	1	TRUE	NA	NA	NA	C	coding	308	927	97	1023	30.0	-23	True	AATAAA	-25
PB.3305.2	chr14	+	3542	9	full-splice_match	TOX4	ENST00000448790.6	4534	9	9	983	3	-983	multi-exon	FALSE	canonical	1	52098	junction_8	171169.08649376317	NA	2	NA	TRUE	NA	NA	NA	C	coding	621	1866	95	1960	30.0	-21	True	AATAAA	-18
PB.3305.3	chr14	+	1544	6	novel_not_in_catalog	TOX4	novel	724	4	NA	NA	-8	228	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	130300.93877328743	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	85	1167	30.0	-11	True	ATTAAA	-35
PB.3305.4	chr14	+	4252	9	full-splice_match	TOX4	ENST00000448790.6	4534	9	19	263	-8	-263	multi-exon	FALSE	canonical	1	52098	junction_8	171169.08649376317	NA	3	NA	TRUE	NA	NA	NA	C	coding	621	1866	85	1950	30.0	-11	True	CATAAA	-32
PB.3305.5	chr14	+	1815	7	novel_not_in_catalog	TOX4	novel	724	4	NA	NA	-8	226	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	170263.59156678864	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	85	1440	35.0	-11	True	ATTAAA	-33
PB.3305.6	chr14	+	1570	6	novel_not_in_catalog	TOX4	novel	724	4	NA	NA	4	218	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	130300.93877328743	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	73	1203	40.0	1	True	ATTAAA	-25
PB.3305.7	chr14	+	4504	9	full-splice_match	TOX4	ENST00000448790.6	4534	9	31	-1	4	1	multi-exon	FALSE	canonical	1	52098	junction_8	171169.08649376317	NA	2	NA	TRUE	NA	NA	NA	C	coding	621	1866	73	1938	30.0	1	True	AATAAA	-24
PB.6480.1	chr2	-	2146	12	novel_in_catalog	FANCL	novel	1576	13	NA	NA	1	-2	intron_retention	FALSE	canonical	1	153273	junction_5	57866.132725412375	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	59	853	15.0	-47	True	AATAAA	-16
PB.7951.11	chr3	-	3473	16	full-splice_match	XPC	ENST00000285021.11	3832	16	182	177	0	-177	multi-exon	FALSE	canonical	1	190914	junction_15	49922.02653071421	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	34	2856	60.0	-1	True	NA	NA
PB.3086.1	chr13	-	3418	11	full-splice_match	KATNAL1	ENST00000380615.7	7551	11	-39	4172	-39	1678	multi-exon	FALSE	canonical	1	44476	junction_10	27877.148006924956	NA	3	NA	TRUE	NA	NA	NA	C	coding	490	1473	208	1680	30.0	9	True	AATAAA	-21
PB.3086.2	chr13	-	2209	11	full-splice_match	KATNAL1	ENST00000380615.7	7551	11	-70	5412	-70	438	multi-exon	FALSE	canonical	1	44476	junction_10	27877.148006924956	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	239	1711	25.0	-4	True	ATTAAA	-12
PB.9035.3	chr4	-	3295	15	novel_not_in_catalog	PLRG1	novel	3351	15	NA	NA	0	-21	any annotated donor/acceptor	TRUE	canonical	0	0	junction_11	216886.55384575305	NA	12	3	TRUE	NA	NA	NA	C	coding	398	1197	441	1637	75.0	-1	True	NA	NA
PB.7951.15	chr3	-	2409	1	novel_in_catalog	XPC	novel	3832	16	NA	NA	-20	-7962	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	100	303	520	822	30.0	-13	False	ATTAAA	-20
PB.7951.14	chr3	-	2764	16	full-splice_match	XPC	ENST00000285021.11	3832	16	182	886	0	-304	multi-exon	FALSE	canonical	1	190914	junction_15	49922.02653071421	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2730	34	2763	55.0	-1	True	NA	NA
PB.9542.2	chr5	-	2353	8	full-splice_match	PRELID2	ENST00000394450.6	1102	8	-14	-1237	-14	0	multi-exon	FALSE	canonical	1	9793	junction_7	35949.81866378722	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	390	836	100.0	-13	True	NA	NA
PB.9542.1	chr5	-	2901	8	novel_not_in_catalog	PRELID2	novel	525	3	NA	NA	15	2326	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	35829.54892549	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	104	637	20.0	-17	True	NA	NA
PB.10674.1	chr7	-	6816	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	37	-1	-24	1	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1589	4770	234	5003	15.0	-9	True	NA	NA
PB.5531.1	chr18	+	1939	2	full-splice_match	C18orf65	ENST00000622985.1	2076	2	-18	155	-18	-155	multi-exon	FALSE	canonical	1	3066	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-106	False	NA	NA
PB.10674.7	chr7	-	5703	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	-14	1163	-14	-1163	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1589	4770	285	5054	80.0	-1	True	AATGAA	-40
PB.1595.1	chr10	+	3228	1	antisense	novelGene_ERLIN1_AS_novelGene_CHUK_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	136	411	221	631	40.0	-45	False	ATTAAA	-11
PB.10674.5	chr7	-	6109	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	16	727	16	-727	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1589	4770	255	5024	70.0	29	False	NA	NA
PB.8812.13	chr4	-	2620	10	full-splice_match	GRSF1	ENST00000254799.10	6666	10	2	4044	2	-68	multi-exon	FALSE	canonical	1	401834	junction_9	337155.39673766657	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	117	1559	40.0	3288	False	ATTAAA	-23
PB.10674.8	chr7	-	4895	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	14	1943	14	790	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1546	4638	257	4894	55.0	27	False	AAAACA	-31
PB.10674.9	chr7	-	2836	3	full-splice_match	SAMD9	ENST00000379958.2	6852	3	11	4005	11	-1272	multi-exon	FALSE	canonical	1	118060	junction_2	60785.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2577	260	2836	45.0	24	False	AATACA	-14
PB.7213.8	chr20	+	3168	20	full-splice_match	PYGB	ENST00000216962.8	4134	20	258	708	258	670	multi-exon	FALSE	canonical	1	657567	junction_1	182705.11076897246	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	126	2384	45.0	-6	True	NA	NA
PB.7213.9	chr20	+	4656	19	novel_in_catalog	PYGB	novel	4134	20	NA	NA	9	-5	intron_retention	FALSE	canonical	1	657567	junction_1	185088.81215177802	NA	3	NA	TRUE	NA	NA	NA	C	coding	415	1248	1922	3169	10.0	-21	True	ATTAAA	-21
PB.3452.13	chr14	+	2245	3	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	0	1310	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	162320.0	NA	7	1	TRUE	NA	NA	NA	B	coding	175	528	365	892	60.0	26	True	NA	NA
PB.3452.12	chr14	+	2613	4	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	-16	1510	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	152712.2995272119	NA	3	1	TRUE	NA	NA	NA	B	coding	175	528	533	1060	35.0	2	True	AATAAA	-14
PB.3452.11	chr14	+	2611	2	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	-18	-1585	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.3452.10	chr14	+	3056	4	novel_not_in_catalog	MAPK1IP1L	novel	6480	4	NA	NA	16	1310	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	153036.76362960052	NA	5	1	TRUE	NA	NA	NA	B	coding	175	528	1176	1703	60.0	-2	True	NA	NA
PB.4098.1	chr15	+	2230	3	full-splice_match	NR2F2	ENST00000394166.7	5275	3	1594	1451	-226	194	multi-exon	FALSE	canonical	1	444858	junction_1	63146.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	225	1040	20.0	-8365	False	ATTAAA	-18
PB.4098.2	chr15	+	1697	3	full-splice_match	NR2F2	ENST00000453270.2	1712	3	-46	61	-46	-61	multi-exon	FALSE	canonical	1	30453	junction_1	270348.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	759	1544	80.0	-1	True	NA	NA
PB.4098.3	chr15	+	2732	3	full-splice_match	NR2F2	ENST00000453270.2	1712	3	-45	-975	-45	193	multi-exon	FALSE	canonical	1	30453	junction_1	270348.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	758	1543	20.0	0	True	ATTAAA	-17
PB.7213.4	chr20	+	4231	21	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	canonical	1	12405	junction_5	332901.7871457699	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	883	2742	15.0	-35	True	ATTAAA	-23
PB.7213.5	chr20	+	2748	20	full-splice_match	PYGB	ENST00000216962.8	4134	20	-5	1391	-5	-13	multi-exon	FALSE	canonical	1	657567	junction_1	182705.11076897246	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	116	2647	15.0	-35	True	NA	NA
PB.7213.6	chr20	+	4182	20	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	1530	junction_17	337505.51788758225	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	114	1520	15.0	-33	True	ATTAAA	-23
PB.7213.7	chr20	+	4027	20	novel_not_in_catalog	PYGB	novel	4134	20	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	345541.1018363394	NA	14	2	TRUE	NA	NA	NA	C	coding	583	1752	114	1865	15.0	-33	True	ATTAAA	-22
PB.8812.14	chr4	-	2275	10	full-splice_match	GRSF1	ENST00000514161.5	1765	10	96	-606	96	-11	multi-exon	FALSE	canonical	1	42486	junction_9	438465.1803476349	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	69	1157	40.0	13	True	AATAAA	-21
PB.4538.3	chr16	+	7893	3	full-splice_match	ATXN1L	ENST00000427980.6	7886	3	-7	0	-7	0	multi-exon	FALSE	canonical	1	50167	junction_2	3203.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	689	2070	301	2370	0.0	8	True	NA	NA
PB.4538.2	chr16	+	7704	3	full-splice_match	ATXN1L	ENST00000427980.6	7886	3	-15	197	-15	-197	multi-exon	FALSE	canonical	1	50167	junction_2	3203.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	689	2070	309	2378	20.0	0	True	AATAAA	-17
PB.4538.1	chr16	+	2450	1	genic	IST1_ATXN1L	novel	NA	NA	NA	NA	-18	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	205	618	3	620	75.0	-3	True	NA	NA
PB.6428.11	chr2	-	1061	8	full-splice_match	SRSF7	ENST00000313117.10	2489	8	133	1295	2	-1	multi-exon	FALSE	canonical	1	2207138	junction_7	326225.6787759301	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	106	822	20.0	-1	True	AATAAA	-15
PB.4538.4	chr16	+	3215	1	novel_in_catalog	ATXN1L	novel	7886	3	NA	NA	10	797	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	196	591	2	592	95.0	25	True	NA	NA
PB.9208.1	chr5	+	1682	2	novel_not_in_catalog	ZNF131	novel	750	3	NA	NA	-541	-11287	intron_retention	FALSE	canonical	1	69681	junction_1	0.0	NA	61	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	14	True	NA	NA
PB.6428.10	chr2	-	1509	9	full-splice_match	SRSF7	ENST00000425778.5	2857	9	55	1293	-2	-1	multi-exon	FALSE	canonical	1	261941	junction_5	1150321.7772253987	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	105	518	20.0	0	True	AATAAA	-15
PB.8891.3	chr4	-	2257	9	full-splice_match	ADH5	ENST00000296412.12	2615	9	34	324	0	-324	multi-exon	FALSE	canonical	1	115329	junction_7	271360.2366121232	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	18	1142	45.0	12	True	NA	NA
PB.5982.3	chr19	-	1925	16	full-splice_match	SARS2	ENST00000221431.10	2057	16	129	3	-4	0	multi-exon	FALSE	canonical	1	169975	junction_14	55606.200401513976	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	32	1588	20.0	-5	True	AATAAA	-11
PB.5982.2	chr19	-	2487	15	novel_in_catalog	SARS2	novel	690	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	169975	junction_13	53594.35408778368	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	1164	2150	20.0	3	True	AATAAA	-11
PB.5982.1	chr19	-	2580	15	novel_not_in_catalog	SARS2	novel	690	2	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_5	106555.26419486631	NA	22	1	TRUE	NA	NA	NA	C	coding	181	546	1163	1708	20.0	4	True	AATAAA	-11
PB.9938.1	chr6	-	786	6	full-splice_match	RPS10	ENST00000621356.3	781	6	-7	2	-7	-2	multi-exon	FALSE	canonical	1	2768	junction_5	1054841.7936241624	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	239	736	15.0	1	True	AATAAA	-20
PB.9938.2	chr6	-	596	6	full-splice_match	RPS10	ENST00000648437.1	588	6	-10	2	-10	-2	multi-exon	FALSE	canonical	1	14887	junction_2	4590772.60441053	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	49	546	15.0	-11	False	AATAAA	-20
PB.8690.1	chr4	+	2817	2	full-splice_match	TADA2B	ENST00000310074.7	4350	2	211	1322	67	-11	multi-exon	FALSE	canonical	1	113655	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	328	987	255	1241	35.0	230	False	AATAAA	-8
PB.12014.4	chrX	-	1704	3	full-splice_match	CXorf21	ENST00000378962.3	1855	3	-14	165	-14	-165	multi-exon	FALSE	canonical	1	78515	junction_1	47307.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	338	1243	65.0	-6	True	NA	NA
PB.12014.5	chrX	-	1390	3	full-splice_match	CXorf21	ENST00000378962.3	1855	3	78	387	78	-387	multi-exon	FALSE	canonical	1	78515	junction_1	47307.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	246	1151	75.0	-1	True	NA	NA
PB.12014.1	chrX	-	2977	3	full-splice_match	CXorf21	ENST00000378962.3	1855	3	-1	-1121	-1	1121	multi-exon	FALSE	canonical	1	78515	junction_1	47307.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	301	906	325	1230	20.0	7	True	NA	NA
PB.12014.2	chrX	-	2562	4	novel_not_in_catalog	CXorf21	novel	1855	3	NA	NA	47	1121	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70781.82468371069	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	277	1182	20.0	-1	True	NA	NA
PB.12014.3	chrX	-	2043	3	full-splice_match	CXorf21	ENST00000378962.3	1855	3	47	-235	47	235	multi-exon	FALSE	canonical	1	78515	junction_1	47307.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	277	1182	20.0	-1	True	ATTAAA	-13
PB.7549.2	chr21	+	3520	9	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	643	-3	any annotated donor/acceptor	FALSE	canonical	1	9273	junction_1	161922.71977739682	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	112	1242	20.0	-8483	False	AATAAA	-12
PB.7549.3	chr21	+	3776	10	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	515	-2	any annotated donor/acceptor	FALSE	canonical	1	281	junction_1	199703.6149603262	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	367	1497	20.0	-17	True	AATAAA	-13
PB.7549.1	chr21	+	3644	10	full-splice_match	AGPAT3	ENST00000291572.12	5546	10	37	1865	37	-2	multi-exon	FALSE	canonical	1	62227	junction_1	154294.0064099208	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	235	1365	20.0	0	True	AATAAA	-13
PB.7549.6	chr21	+	4389	9	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	532	755	any annotated donor/acceptor	FALSE	canonical	1	9273	junction_1	161922.71977739682	NA	5	NA	TRUE	NA	NA	NA	C	coding	376	1131	223	1353	15.0	0	True	AAAAAG	-16
PB.7549.7	chr21	+	3779	10	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	532	-3	any annotated donor/acceptor	FALSE	canonical	1	9273	junction_1	220631.07840974472	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	557	1501	20.0	0	True	AATAAA	-12
PB.7549.4	chr21	+	3641	9	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	634	109	any annotated donor/acceptor	FALSE	canonical	1	9273	junction_1	161922.71977739682	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	121	1251	20.0	-8492	False	ATTAAA	-13
PB.7549.5	chr21	+	4748	8	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	531	-3	intron_retention	FALSE	canonical	1	9273	junction_1	170833.99466685994	NA	3	NA	TRUE	NA	NA	NA	C	coding	353	1062	224	1285	20.0	-1	True	AATAAA	-12
PB.11143.1	chr8	-	2675	2	intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	290	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	281	846	1284	2129	60.0	NA	False	NA	NA
PB.7549.8	chr21	+	2095	9	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	532	410	any annotated donor/acceptor	FALSE	canonical	1	9273	junction_1	161922.71977739682	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	223	1353	15.0	0	True	NA	NA
PB.7549.9	chr21	+	3629	9	novel_not_in_catalog	AGPAT3	novel	5546	10	NA	NA	716	-3	any annotated donor/acceptor	FALSE	canonical	1	602	junction_1	164587.9407199613	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	221	1351	20.0	-8410	False	AATAAA	-12
PB.121.2	chr1	-	2740	3	full-splice_match	NBPF1	ENST00000599069.5	2752	3	4	8	4	6	multi-exon	FALSE	canonical	1	3055	junction_1	90680.0	NA	6	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	5	True	NA	NA
PB.10001.12	chr6	-	3304	4	incomplete-splice_match	ZNF318	ENST00000361428.2	8006	10	-48	18086	-13	-18086	3prime_fragment	FALSE	canonical	1	52842	junction_3	67125.5940772387	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	127	2847	30.0	-11	True	AATAAA	-43
PB.4043.6	chr15	-	1983	7	novel_not_in_catalog	HDGFL3	novel	3397	4	NA	NA	177	955	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	254147.9303089705	NA	0	NA	TRUE	NA	NA	NA	B	coding	185	558	333	890	30.0	-19	True	AATAAA	-16
PB.823.3	chr1	-	2987	1	novel_in_catalog	GLMP	novel	1941	7	NA	NA	-2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	120	363	650	1012	10.0	-3	True	AATAGA	-20
PB.4043.2	chr15	-	3683	6	novel_not_in_catalog	HDGFL3	novel	3397	4	NA	NA	384	2895	any annotated donor/acceptor	FALSE	canonical	1	10033	junction_5	269972.5366865304	NA	37	2	TRUE	NA	NA	NA	B	coding	215	648	3	650	20.0	3	True	AATAAA	-18
PB.5506.4	chr18	+	2835	10	full-splice_match	TNFRSF11A	ENST00000586569.2	8147	10	-8	5320	-8	-1687	multi-exon	FALSE	canonical	1	10323	junction_1	10199.727425551899	NA	3	NA	TRUE	NA	NA	NA	C	coding	616	1851	47	1897	80.0	-3	True	NA	NA
PB.4043.8	chr15	-	1741	6	novel_not_in_catalog	HDGFL3	novel	3397	4	NA	NA	384	953	any annotated donor/acceptor	FALSE	canonical	1	10033	junction_5	269972.5366865304	NA	0	NA	TRUE	NA	NA	NA	B	coding	215	648	3	650	30.0	3	True	AATAAA	-14
PB.4043.9	chr15	-	1486	6	novel_not_in_catalog	HDGFL3	novel	3397	4	NA	NA	375	689	any annotated donor/acceptor	FALSE	canonical	1	10033	junction_5	269972.5366865304	NA	0	NA	TRUE	NA	NA	NA	B	coding	218	657	3	659	50.0	-6	True	AATAAA	-19
PB.5506.1	chr18	+	4340	10	full-splice_match	TNFRSF11A	ENST00000586569.2	8147	10	-70	3877	-42	-244	multi-exon	FALSE	canonical	1	10323	junction_1	10199.727425551899	NA	3	NA	TRUE	NA	NA	NA	C	coding	616	1851	109	1959	30.0	-9171	False	GATAAA	-30
PB.121.5	chr1	-	2786	3	full-splice_match	NBPF1	ENST00000449853.2	2755	3	-29	-2	-1	2	multi-exon	TRUE	canonical	1	66464	junction_1	58975.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.9906.7	chr6	-	3264	10	novel_in_catalog	TAP1	novel	2542	5	NA	NA	91	-1	combination_of_known_junctions	FALSE	canonical	1	820136	junction_9	128352.73852200726	NA	3	NA	TRUE	NA	NA	NA	C	coding	540	1623	90	1712	10.0	-27	True	AATAAA	-14
PB.9906.6	chr6	-	3289	9	novel_in_catalog	TAP1	novel	2542	5	NA	NA	81	-1	intron_retention	FALSE	canonical	1	820136	junction_8	134836.85033211202	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	1712	2920	10.0	-37	True	AATAAA	-14
PB.9906.5	chr6	-	3444	9	novel_in_catalog	TAP1	novel	2542	5	NA	NA	86	-1	intron_retention	FALSE	canonical	1	820136	junction_8	138459.34959650613	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	1559	2482	10.0	-32	True	AATAAA	-14
PB.9906.4	chr6	-	3141	10	novel_in_catalog	TAP1	novel	2542	5	NA	NA	82	0	intron_retention	FALSE	canonical	1	820136	junction_9	131089.3213975461	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	1563	2771	5.0	-36	True	AATAAA	-15
PB.9906.2	chr6	-	3710	9	novel_in_catalog	TAP1	novel	2542	5	NA	NA	73	1	intron_retention	FALSE	canonical	1	820136	junction_8	136121.91579833635	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	108	1328	5.0	-45	True	AATAAA	-16
PB.9906.1	chr6	-	2125	11	full-splice_match	TAP1	ENST00000354258.4	2959	11	832	2	-132	-2	multi-exon	FALSE	canonical	1	820136	junction_10	124453.10389946087	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	114	1757	10.0	1381	False	AATAAA	-13
PB.1564.13	chr10	-	2713	15	full-splice_match	TM9SF3	ENST00000371142.8	6141	15	78	3350	78	818	multi-exon	FALSE	canonical	1	590523	junction_14	236767.59699050494	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	140	1909	30.0	340	False	ATTAAA	-22
PB.9906.9	chr6	-	5173	7	novel_in_catalog	TAP1	novel	2542	5	NA	NA	117	-1	intron_retention	FALSE	canonical	1	820136	junction_6	152347.80399248732	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	64	1284	10.0	-1	True	AATAAA	-14
PB.9906.8	chr6	-	2426	12	novel_not_in_catalog	TAP1	novel	2542	5	NA	NA	103	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	325392.93290679494	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	414	2057	10.0	-15	True	AATAAA	-14
PB.1140.5	chr1	+	8136	28	full-splice_match	MIA3	ENST00000344922.9	8142	28	0	6	0	-6	multi-exon	FALSE	canonical	1	50489	junction_8	179575.64985356995	NA	2	NA	TRUE	NA	NA	NA	C	coding	1907	5724	26	5749	30.0	-20	True	ATTAAA	-15
PB.1140.4	chr1	+	5992	28	full-splice_match	MIA3	ENST00000344922.9	8142	28	11	2139	-2	50	multi-exon	FALSE	canonical	1	50489	junction_8	179575.64985356995	NA	0	NA	TRUE	NA	NA	NA	C	coding	1907	5724	15	5738	35.0	-9	True	AATAAA	-19
PB.1140.7	chr1	+	4351	7	full-splice_match	MIA3	ENST00000470521.1	4071	7	-2	-278	-2	278	multi-exon	FALSE	canonical	1	92154	junction_1	42610.173555997426	NA	5	1	TRUE	NA	NA	NA	C	coding	1232	3699	15	3713	90.0	-9	True	NA	NA
PB.1140.6	chr1	+	3626	7	novel_not_in_catalog	MIA3	novel	8142	28	NA	NA	4	-2817	any annotated donor/acceptor	FALSE	canonical	1	1128	junction_6	76396.57996435443	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	22	3510	25.0	-16	True	NA	NA
PB.1140.1	chr1	+	4752	19	incomplete-splice_match	MIA3	ENST00000344922.9	8142	28	-17	9188	-17	-1169	3prime_fragment	FALSE	canonical	1	50489	junction_8	178653.94362876826	NA	1	NA	TRUE	NA	NA	NA	C	coding	1570	4710	43	4752	35.0	-37	False	AGTAAA	-11
PB.11553.2	chr9	+	2867	1	genic	FAM201A	novel	NA	NA	NA	NA	-43	273	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	96	291	183	473	30.0	NA	False	NA	NA
PB.5439.3	chr18	+	3511	9	novel_not_in_catalog	AC011825.3	novel	565	5	NA	NA	73036	19781	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	54298.07686151854	NA	3	NA	TRUE	NA	NA	NA	B	coding	245	738	449	1186	35.0	-37	True	ATTAAA	-15
PB.1140.2	chr1	+	6369	29	novel_not_in_catalog	MIA3	novel	8142	28	NA	NA	-15	-6	any annotated donor/acceptor	FALSE	canonical	1	463	junction_18	207664.54165449485	NA	7	1	TRUE	NA	NA	NA	C	coding	1541	4626	41	4666	20.0	-35	False	CATAAA	-14
PB.1140.9	chr1	+	5817	28	full-splice_match	MIA3	ENST00000344922.9	8142	28	17	2308	4	-119	multi-exon	FALSE	canonical	1	50489	junction_8	179575.64985356995	NA	0	NA	TRUE	NA	NA	NA	C	coding	1907	5724	9	5732	45.0	-3	True	AGTAAA	-24
PB.1140.8	chr1	+	6262	28	full-splice_match	MIA3	ENST00000344922.9	8142	28	14	1866	1	-1	multi-exon	FALSE	canonical	1	50489	junction_8	179575.64985356995	NA	0	NA	TRUE	NA	NA	NA	C	coding	1907	5724	12	5735	15.0	-6	True	CATAAA	-19
PB.8812.18	chr4	-	1613	11	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	0	64	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	487454.60186894325	NA	1	1	TRUE	NA	NA	NA	C	coding	448	1347	15	1361	30.0	3286	False	AATAAA	-44
PB.8044.3	chr3	-	1760	8	novel_in_catalog	SEC22C	novel	5955	5	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	23915	junction_6	153575.2415299406	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	573	1115	25.0	2	True	AATAAA	-16
PB.8293.3	chr3	+	2204	7	full-splice_match	CD200	ENST00000473539.5	1524	7	-2	-678	-2	1	multi-exon	FALSE	canonical	1	12148	junction_1	101331.84786794985	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	60	944	30.0	-2	True	ATTAAA	-14
PB.8485.13	chr3	-	2466	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	75	1175	8	-1175	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	21	578	35.0	-3	True	AATAAA	-19
PB.8485.14	chr3	-	3391	4	full-splice_match	SSR3	ENST00000467733.1	873	4	0	-2518	0	-1296	multi-exon	FALSE	canonical	1	699918	junction_2	192434.62455309049	NA	4	1	TRUE	NA	NA	NA	C	coding	169	510	29	538	80.0	-11	True	NA	NA
PB.8485.15	chr3	-	2387	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	28	1301	-7	-1301	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	5	NA	TRUE	NA	NA	NA	C	coding	185	558	68	625	70.0	-6	True	NA	NA
PB.8485.16	chr3	-	2234	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	28	1454	-7	1227	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	68	625	60.0	-6	True	NA	NA
PB.8044.2	chr3	-	6367	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	-34	-4953	-9	0	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	179	1090	25.0	-30	True	AATAAA	-16
PB.8485.18	chr3	-	1122	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	62	2532	3	149	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	34	591	50.0	-16	True	ATTAAA	-31
PB.8485.19	chr3	-	811	5	full-splice_match	SSR3	ENST00000265044.6	3716	5	38	2867	3	1	multi-exon	FALSE	canonical	1	699918	junction_3	238186.88523352833	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	58	615	40.0	4	True	ATTAAA	-14
PB.1150.4	chr1	-	3009	24	novel_in_catalog	NVL	novel	591	4	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	1	10878	junction_20	68018.77998007106	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	61	2733	40.0	-48	True	AATAAA	-38
PB.1150.5	chr1	-	2727	21	novel_in_catalog	NVL	novel	591	4	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	1	12576	junction_18	68076.72303776085	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	235	2451	40.0	0	True	AATAAA	-38
PB.1150.2	chr1	-	2829	22	full-splice_match	NVL	ENST00000391875.6	2832	22	-10	13	-1	-10	multi-exon	FALSE	canonical	1	42934	junction_21	51473.66816797368	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	298	2550	45.0	-41	True	AATAAA	-41
PB.8044.1	chr3	-	1584	7	full-splice_match	SEC22C	ENST00000273156.11	1608	7	24	0	-17	0	multi-exon	FALSE	canonical	1	196238	junction_6	92400.78948015302	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	187	939	25.0	317	False	AATAAA	-16
PB.1150.1	chr1	-	2900	23	full-splice_match	NVL	ENST00000281701.10	3123	23	221	2	2	1	multi-exon	FALSE	canonical	1	157670	junction_14	36485.99141222073	NA	1	NA	TRUE	NA	NA	NA	C	coding	856	2571	40	2610	50.0	-27	True	NA	NA
PB.11507.19	chr9	-	3888	29	full-splice_match	UBAP2	ENST00000379238.5	4289	29	14	387	0	61	multi-exon	FALSE	canonical	1	179657	junction_28	65871.9369493116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	108	3464	15.0	-1	True	AATGAA	-22
PB.7659.1	chr22	+	3195	15	full-splice_match	SUSD2	ENST00000358321.3	3404	15	201	8	201	-4	multi-exon	FALSE	canonical	1	35602	junction_1	21361.71392661771	NA	1	NA	TRUE	NA	NA	NA	A	coding	822	2469	61	2529	0.0	-7203	False	AAAACA	-14
PB.7110.66	chr2	+	2047	16	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	-74	no_combination_of_known_junctions	FALSE	canonical	1	2557	junction_3	1152629.78154592	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	347	1432	40.0	13	True	AATAAA	-17
PB.8044.7	chr3	-	3238	7	novel_in_catalog	SEC22C	novel	5955	5	NA	NA	35	1875	combination_of_known_junctions	FALSE	canonical	1	26125	junction_6	149136.77865795622	NA	14	NA	TRUE	NA	NA	NA	C	coding	303	912	128	1039	60.0	-2	True	NA	NA
PB.11789.2	chr9	-	3773	9	novel_not_in_catalog	HSPA5	novel	3908	8	NA	NA	-13	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1555374.6812638456	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	218	2182	20.0	-1	True	ATTAAA	-12
PB.8044.6	chr3	-	3272	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	-17	-1875	8	1875	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	17	NA	TRUE	NA	NA	NA	C	coding	303	912	162	1073	60.0	-13	True	NA	NA
PB.11118.1	chr8	+	2673	1	incomplete-splice_match	HOOK3	ENST00000307602.8	14398	22	130929	6	9456	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	109	330	2178	2507	25.0	4497	False	AATAAA	-13
PB.10701.2	chr7	-	3980	4	novel_not_in_catalog	ATP5MF-PTCD1	novel	2491	9	NA	NA	-3	-23018	any annotated donor/acceptor	FALSE	canonical	1	17	junction_3	1260917.8316092696	NA	2	NA	TRUE	NA	NA	NA	A	coding	104	315	3535	3849	10.0	-4	True	AATAAA	-12
PB.10701.1	chr7	-	2065	2	full-splice_match	ATP5MF	ENST00000485011.1	597	2	1	-1469	1	4	multi-exon	FALSE	canonical	1	1193296	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	-22	True	AATAAA	-22
PB.1232.6	chr1	-	7680	2	full-splice_match	CHML	ENST00000366553.2	7594	2	-101	15	-101	-15	multi-exon	FALSE	canonical	1	69411	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	656	1971	782	2752	30.0	13	True	AATAAA	-19
PB.11789.5	chr9	-	2533	8	full-splice_match	HSPA5	ENST00000324460.6	3908	8	-13	1388	-13	-1388	multi-exon	FALSE	canonical	1	2174427	junction_2	999659.513985494	NA	19	1	TRUE	NA	NA	NA	C	coding	654	1965	218	2182	25.0	-1	True	AATAAA	-20
PB.7110.65	chr2	+	4392	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	39000	junction_1	1000082.0737706759	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	1220	2305	25.0	13	True	AATAAA	-20
PB.4806.1	chr17	+	3920	6	full-splice_match	GID4	ENST00000268719.8	4237	6	317	0	164	0	multi-exon	FALSE	canonical	1	99240	junction_1	18247.974074948703	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	106	759	25.0	-64	False	AATAAA	-16
PB.4806.2	chr17	+	3990	5	novel_in_catalog	GID4	novel	4237	6	NA	NA	-37	0	intron_retention	FALSE	canonical	1	7356	junction_4	51783.51527935797	NA	2	NA	TRUE	NA	NA	NA	C	coding	163	492	307	798	25.0	0	True	AATAAA	-16
PB.9735.2	chr6	-	3795	7	novel_in_catalog	ELOVL2	novel	3997	8	NA	NA	11	-3	no_combination_of_known_junctions	FALSE	canonical	1	892	junction_5	28841.98375054439	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	99	776	25.0	1	True	AATAAA	-15
PB.7110.64	chr2	+	3461	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	34147	junction_6	1153935.7703071109	NA	60	3	TRUE	NA	NA	NA	C	coding	194	585	791	1375	25.0	1	True	AATAAA	-19
PB.7982.12	chr3	-	2303	7	incomplete-splice_match	NGLY1	ENST00000396649.7	2024	11	1	15626	1	-15486	3prime_fragment	FALSE	canonical	1	266653	junction_6	45471.58420620753	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	48	1256	20.0	5	True	AATAAA	-16
PB.10588.8	chr7	-	2510	10	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	1367	junction_8	96596.6345560525	NA	0	NA	TRUE	NA	NA	NA	B	coding	135	408	1390	1797	30.0	NA	False	AATAAA	-17
PB.10588.9	chr7	-	2492	9	novel_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	1367	junction_7	98569.42284684117	NA	3	NA	TRUE	NA	NA	NA	B	coding	245	738	1390	2127	30.0	NA	False	AATAAA	-17
PB.5422.13	chr18	+	2647	13	full-splice_match	RIOK3	ENST00000339486.7	4038	13	465	926	0	-314	multi-exon	FALSE	canonical	1	350772	junction_1	248043.23309197984	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	153	1712	35.0	1	True	ATTAAA	-23
PB.10588.5	chr7	-	1821	11	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-13	1	any annotated donor/acceptor	FALSE	canonical	1	174	junction_9	96243.57509880853	NA	0	NA	TRUE	NA	NA	NA	B	coding	135	408	699	1106	30.0	NA	False	AATAAA	-19
PB.10588.6	chr7	-	4605	7	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	1529	junction_6	101933.51787276188	NA	0	NA	TRUE	NA	NA	NA	B	coding	161	486	3337	3822	30.0	NA	False	AATAAA	-17
PB.10588.7	chr7	-	3113	5	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	2560	-1	intron_retention	FALSE	canonical	1	20683	junction_2	97085.25144525043	NA	7	1	TRUE	NA	NA	NA	B	coding	227	684	1925	2608	30.0	NA	False	AATAAA	-17
PB.11888.2	chr9	+	2299	4	full-splice_match	BRD3OS	ENST00000550853.1	1068	4	-26	-1205	21	0	multi-exon	FALSE	canonical	1	2739	junction_3	63506.18582643916	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	1134	1511	25.0	-30	True	AATAAA	-16
PB.10588.1	chr7	-	2777	7	novel_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	1529	junction_6	97396.47783915096	NA	0	NA	TRUE	NA	NA	NA	B	coding	275	828	1040	1867	25.0	NA	False	AATAAA	-22
PB.10588.2	chr7	-	2693	8	novel_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	1367	junction_6	101699.22838127603	NA	11	NA	TRUE	NA	NA	NA	B	coding	135	408	1376	1783	25.0	NA	False	AATAAA	-22
PB.10588.3	chr7	-	2576	9	novel_not_in_catalog	NSUN5P2	novel	1776	5	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	1367	junction_7	97220.83655451323	NA	0	NA	TRUE	NA	NA	NA	B	coding	135	408	1381	1788	25.0	NA	False	AATAAA	-22
PB.9169.9	chr5	+	2496	19	full-splice_match	TARS	ENST00000265112.7	4314	19	212	1606	-5	0	multi-exon	FALSE	canonical	1	1135506	junction_4	278677.2242202637	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	100	2271	30.0	-5	True	AATAAA	-17
PB.6591.3	chr2	+	2363	14	full-splice_match	ELMOD3	ENST00000409013.7	2413	14	49	1	0	-1	multi-exon	FALSE	canonical	1	32607	junction_3	40855.46684791335	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	433	1578	20.0	0	True	AATAAA	-13
PB.6591.1	chr2	+	2284	13	novel_in_catalog	ELMOD3	novel	590	3	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	32607	junction_2	42837.9104087431	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	356	1501	25.0	-18	True	AATAAA	-11
PB.7801.3	chr22	+	1527	8	full-splice_match	GRAP2	ENST00000344138.8	3893	8	25	2341	25	193	multi-exon	FALSE	canonical	1	62985	junction_1	35880.295052594316	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	239	1231	10.0	0	True	AATGAA	-19
PB.7801.2	chr22	+	3452	9	novel_not_in_catalog	GRAP2	novel	3893	8	NA	NA	-18	-381	any annotated donor/acceptor	FALSE	canonical	1	686	junction_1	50463.79264244192	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	204	1196	5.0	2	True	AATAAA	-20
PB.7801.1	chr22	+	3534	8	full-splice_match	GRAP2	ENST00000344138.8	3893	8	-20	379	-20	-379	multi-exon	TRUE	canonical	1	62985	junction_1	35880.295052594316	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	284	1276	5.0	0	True	AATAAA	-22
PB.11608.1	chr9	-	1803	9	full-splice_match	NMRK1	ENST00000361092.8	1185	9	4	-622	4	-5	multi-exon	FALSE	canonical	1	146034	junction_7	51959.13485119219	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	234	833	20.0	0	True	AATAAA	-14
PB.6567.4	chr2	-	2158	5	novel_not_in_catalog	MOGS	novel	2867	4	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_1	245367.46528052064	NA	1	1	TRUE	NA	NA	NA	C	coding	316	951	1010	1960	50.0	-23	True	AATAAA	-5
PB.11608.2	chr9	-	3718	11	novel_not_in_catalog	NMRK1	novel	2050	10	NA	NA	-3	1	any annotated donor/acceptor	FALSE	canonical	1	25143	junction_8	93080.35008335541	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	2760	3371	25.0	-15	True	NA	NA
PB.6567.3	chr2	-	2561	5	full-splice_match	MOGS	ENST00000452063.7	2433	5	-8	-120	0	-2	multi-exon	FALSE	canonical	1	11309	junction_4	215841.1702027674	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	150	2345	15.0	-23	True	AATAAA	-23
PB.2361.1	chr11	+	1955	11	full-splice_match	FOXRED1	ENST00000263578.9	1970	11	22	-7	-2	0	multi-exon	FALSE	canonical	1	135192	junction_1	85707.83996204782	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	80	1513	5.0	-2	True	AATACA	-22
PB.4293.10	chr16	-	2642	9	full-splice_match	ERI2	ENST00000569729.5	2646	9	4	0	0	0	multi-exon	FALSE	canonical	1	25633	junction_8	42108.62613156003	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	43	882	35.0	-1	True	AATAAA	-17
PB.2361.3	chr11	+	2280	10	novel_in_catalog	FOXRED1	novel	559	4	NA	NA	-2	0	intron_retention	FALSE	canonical	1	5563	junction_3	121768.54003009862	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	1011	1838	5.0	-2	True	AATACA	-22
PB.2361.2	chr11	+	2293	10	novel_in_catalog	FOXRED1	novel	559	4	NA	NA	-15	1	intron_retention	FALSE	canonical	1	135192	junction_1	87048.77365244763	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	1028	1855	5.0	-39	True	AATACA	-18
PB.6436.6	chr2	+	5401	17	full-splice_match	MTA3	ENST00000405094.1	1785	17	-70	-3546	1	-2	multi-exon	FALSE	canonical	1	64326	junction_14	153018.1730901901	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	71	1855	5.0	34	True	AATAAA	-14
PB.6436.7	chr2	+	1673	14	full-splice_match	MTA3	ENST00000406911.5	2041	14	36	332	-27	1	multi-exon	FALSE	canonical	1	194645	junction_1	100815.92036212108	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	36	1580	15.0	-27	True	AATAAA	-18
PB.6436.4	chr2	+	2255	2	incomplete-splice_match	MTA3	ENST00000405592.5	5832	18	-372	260340	-372	-112881	3prime_fragment	FALSE	canonical	1	16024	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	515	898	95.0	-372	False	NA	NA
PB.6436.5	chr2	+	2301	17	full-splice_match	MTA3	ENST00000405094.1	1785	17	-83	-433	-12	-16	multi-exon	FALSE	canonical	1	64326	junction_14	153018.1730901901	NA	2	NA	TRUE	NA	NA	NA	C	coding	594	1785	84	1868	25.0	21	True	ACTAAA	-17
PB.11608.4	chr9	-	2458	1	novel_in_catalog	NMRK1	novel	1121	8	NA	NA	-3	1789	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-7	True	NA	NA
PB.6436.8	chr2	+	3009	14	full-splice_match	MTA3	ENST00000407270.7	2202	14	198	-1005	-23	1005	multi-exon	FALSE	canonical	1	188941	junction_11	103069.51002160957	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	32	1579	100.0	-23	True	NA	NA
PB.6436.9	chr2	+	1997	14	full-splice_match	MTA3	ENST00000406911.5	2041	14	41	3	-22	-3	multi-exon	FALSE	canonical	1	194645	junction_1	100815.92036212108	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	31	1575	30.0	-22	True	AATAAA	-17
PB.9479.5	chr5	-	3446	12	novel_not_in_catalog	ETF1	novel	3874	11	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	355786.524896555	NA	2	NA	TRUE	NA	NA	NA	C	coding	437	1314	159	1472	30.0	-28	True	ATTAAA	-9
PB.10223.2	chr6	-	3423	9	novel_in_catalog	SGK1	novel	3201	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	607702	junction_2	191485.61328595944	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	58	747	25.0	-1	True	AATAAA	-19
PB.10223.3	chr6	-	2799	11	novel_in_catalog	SGK1	novel	3201	14	NA	NA	1	-1	intron_retention	FALSE	canonical	1	607702	junction_2	184227.61795626627	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	691	1782	25.0	0	True	AATAAA	-19
PB.7068.32	chr2	-	2138	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	106	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	2202564.652642683	NA	1	1	TRUE	NA	NA	NA	C	coding	536	1611	245	1855	20.0	-5	True	NA	NA
PB.10223.1	chr6	-	5472	2	full-splice_match	SGK1	ENST00000474427.6	5474	2	1	1	0	-1	multi-exon	FALSE	canonical	1	797956	junction_1	0.0	NA	20	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-21
PB.10223.6	chr6	-	2453	12	full-splice_match	SGK1	ENST00000528577.5	1850	12	27	-630	-18	-1	multi-exon	FALSE	canonical	1	26408	junction_11	324036.9710937369	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	57	1436	25.0	465	False	AATAAA	-19
PB.10223.7	chr6	-	2367	12	full-splice_match	SGK1	ENST00000237305.11	2401	12	32	2	0	-2	multi-exon	FALSE	canonical	1	607702	junction_2	182659.15437645235	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	58	1353	25.0	-1	True	AATAAA	-16
PB.10223.4	chr6	-	2825	11	novel_in_catalog	SGK1	novel	3201	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	607702	junction_2	187469.83671470993	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	55	1077	25.0	2	True	AATAAA	-19
PB.10223.5	chr6	-	2424	12	full-splice_match	SGK1	ENST00000413996.7	2686	12	261	1	261	-1	multi-exon	FALSE	canonical	1	54618	junction_11	317250.2714838792	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	79	1407	25.0	-20	True	AATAAA	-19
PB.10125.3	chr6	-	5786	18	full-splice_match	USP45	ENST00000500704.6	5826	18	-21	61	-21	-1	multi-exon	FALSE	canonical	1	20297	junction_17	30349.272277577707	NA	2	NA	TRUE	NA	NA	NA	C	coding	814	2445	66	2510	30.0	-29	True	AATAAA	-22
PB.10223.8	chr6	-	2473	11	novel_in_catalog	SGK1	novel	3201	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	607702	junction_2	190944.52200754543	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	592	1458	25.0	-2	True	AATAAA	-17
PB.10223.9	chr6	-	2803	11	novel_in_catalog	SGK1	novel	3201	14	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	607702	junction_2	161367.3435606164	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	923	1789	25.0	1	True	AATAAA	-16
PB.9411.2	chr5	+	2528	24	full-splice_match	HSD17B4	ENST00000510025.6	2628	24	20	80	1	0	multi-exon	FALSE	canonical	1	280855	junction_5	288744.2714173176	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	60	2270	25.0	20	True	AATAAA	-12
PB.7815.1	chr22	-	4342	2	full-splice_match	TOB2	ENST00000327492.3	4561	2	223	-4	-15	4	multi-exon	FALSE	canonical	1	173093	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	485	1519	0.0	-4	True	ATTAAA	-23
PB.7815.2	chr22	-	4222	2	novel_not_in_catalog	TOB2	novel	4561	2	NA	NA	2368	0	any annotated donor/acceptor	FALSE	canonical	1	3613	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	369	1403	0.0	4129	False	ATTAAA	-19
PB.7815.3	chr22	-	3976	2	novel_not_in_catalog	TOB2	novel	4561	2	NA	NA	867	-1	any annotated donor/acceptor	FALSE	canonical	1	32	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	344	1035	124	1158	0.0	2628	False	ATTAAA	-18
PB.7815.5	chr22	-	3955	2	full-splice_match	TOB2	ENST00000327492.3	4561	2	178	428	-60	-428	multi-exon	FALSE	canonical	1	173093	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	530	1564	75.0	6	True	AAAAAG	-38
PB.7815.6	chr22	-	2657	2	full-splice_match	TOB2	ENST00000327492.3	4561	2	171	1733	-67	-1733	multi-exon	FALSE	canonical	1	173093	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	537	1571	70.0	-1	True	NA	NA
PB.7815.7	chr22	-	1577	2	full-splice_match	TOB2	ENST00000327492.3	4561	2	226	2758	-12	792	multi-exon	FALSE	canonical	1	173093	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	482	1516	80.0	-1	True	NA	NA
PB.7815.8	chr22	-	3161	1	novel_in_catalog	TOB2	novel	4561	2	NA	NA	-16	-6599	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-5	True	NA	NA
PB.8891.5	chr4	-	2096	5	novel_in_catalog	ADH5	novel	2615	9	NA	NA	-17	-15	intron_retention	FALSE	canonical	1	115329	junction_3	112558.5068228408	NA	6	NA	TRUE	NA	NA	NA	C	coding	191	576	69	644	90.0	-39	False	NA	NA
PB.9221.1	chr5	+	5416	29	full-splice_match	ITGA1	ENST00000282588.6	10757	29	15	5326	15	1372	multi-exon	FALSE	canonical	1	105438	junction_1	39017.59860474986	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	444	3983	15.0	-42	True	NA	NA
PB.6467.16	chr2	+	8152	35	novel_not_in_catalog	SPTBN1	novel	8482	36	NA	NA	16513	1	any annotated donor/acceptor	FALSE	canonical	1	140	junction_1	452150.4997393808	NA	9	NA	TRUE	NA	NA	NA	C	coding	2278	6837	209	7045	15.0	-6695	False	ATTAAA	-16
PB.9221.3	chr5	+	4005	29	full-splice_match	ITGA1	ENST00000282588.6	10757	29	35	6717	-16	-19	multi-exon	FALSE	canonical	1	105438	junction_1	39017.59860474986	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	424	3963	25.0	-22	True	AAGAAA	-25
PB.9221.2	chr5	+	5178	29	full-splice_match	ITGA1	ENST00000282588.6	10757	29	32	5547	-19	1151	multi-exon	FALSE	canonical	1	105438	junction_1	39017.59860474986	NA	1	NA	TRUE	NA	NA	NA	C	coding	1179	3540	427	3966	5.0	-25	True	NA	NA
PB.9221.5	chr5	+	2177	9	incomplete-splice_match	ITGA1	ENST00000282588.6	10757	29	44	64697	-7	6622	3prime_fragment	FALSE	canonical	1	105438	junction_1	35491.37903222943	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	415	1560	85.0	-13	True	NA	NA
PB.9221.4	chr5	+	6089	29	full-splice_match	ITGA1	ENST00000282588.6	10757	29	40	4628	-11	-1909	multi-exon	FALSE	canonical	1	105438	junction_1	39017.59860474986	NA	1	NA	TRUE	NA	NA	NA	C	coding	1179	3540	419	3958	25.0	-17	True	AGTAAA	-17
PB.9221.7	chr5	+	3814	1	novel_in_catalog	ITGA1	novel	10757	29	NA	NA	4	-33446	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-2	True	NA	NA
PB.9221.6	chr5	+	4337	29	full-splice_match	ITGA1	ENST00000282588.6	10757	29	45	6375	-6	323	multi-exon	FALSE	canonical	1	105438	junction_1	39017.59860474986	NA	1	NA	TRUE	NA	NA	NA	C	coding	1179	3540	414	3953	20.0	-12	True	TATAAA	-18
PB.2375.2	chr11	-	3138	4	intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2647	junction_2	5852.564698963657	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-9	True	NA	NA
PB.2375.3	chr11	-	2939	5	intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2454	junction_1	5629.108827114644	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-9	True	NA	NA
PB.2375.1	chr11	-	3208	5	intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	741	junction_3	6231.221649885358	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-1	True	NA	NA
PB.2375.4	chr11	-	2901	4	intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1545	junction_2	6716.695831202191	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-9	True	NA	NA
PB.2375.5	chr11	-	2566	5	intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	436	junction_1	6060.557126824233	NA	6	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-16	True	NA	NA
PB.9360.1	chr5	+	2163	5	full-splice_match	RGMB	ENST00000308234.11	4580	5	-21	2438	-20	1	multi-exon	FALSE	canonical	1	45345	junction_2	123134.25891481216	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	547	1860	25.0	-4871	False	ATTAAA	-16
PB.10781.2	chr7	-	5694	34	full-splice_match	LAMB1	ENST00000222399.10	5725	34	48	-17	-20	-2	multi-exon	FALSE	canonical	1	355755	junction_27	299284.9265951024	NA	0	NA	TRUE	NA	NA	NA	C	coding	1786	5361	184	5544	15.0	1215	False	AATAAA	-19
PB.9360.3	chr5	+	4463	4	incomplete-splice_match	RGMB	ENST00000308234.11	4580	5	1082	7	941	-7	5prime_fragment	FALSE	canonical	1	45345	junction_1	120031.19245429499	NA	4	NA	TRUE	NA	NA	NA	C	coding	437	1314	416	1729	10.0	-3768	False	AATAAA	-15
PB.9360.2	chr5	+	4546	5	full-splice_match	RGMB	ENST00000308234.11	4580	5	32	2	32	-2	multi-exon	FALSE	canonical	1	45345	junction_2	123134.25891481216	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	494	1807	20.0	4	True	AATAAA	-20
PB.9360.5	chr5	+	4364	3	full-splice_match	RGMB	ENST00000513185.1	2052	3	125	-2437	125	-2	multi-exon	FALSE	canonical	1	252498	junction_1	38557.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	437	1314	312	1625	20.0	-385	False	AATAAA	-20
PB.9360.4	chr5	+	2081	3	full-splice_match	RGMB	ENST00000513185.1	2052	3	-23	-6	-23	6	multi-exon	FALSE	canonical	1	252498	junction_1	38557.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	460	1773	40.0	-533	False	ATTAAA	-21
PB.9008.8	chr4	+	3265	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	382	274	0	-274	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	134	1933	65.0	0	True	TTTAAA	-33
PB.10781.8	chr7	-	5952	35	novel_in_catalog	LAMB1	novel	1540	4	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	1	6343	junction_32	341476.08487955446	NA	0	NA	TRUE	NA	NA	NA	C	coding	1787	5364	439	5802	15.0	1215	False	AATAAA	-19
PB.6467.13	chr2	+	9084	31	full-splice_match	SPTBN1	ENST00000333896.5	9075	31	-11	2	-11	-2	multi-exon	FALSE	canonical	1	433650	junction_1	406219.28119042085	NA	10	1	TRUE	NA	NA	NA	C	coding	2155	6468	397	6864	5.0	0	True	ATTAAA	-18
PB.6467.10	chr2	+	6361	28	incomplete-splice_match	SPTBN1	ENST00000333896.5	9075	31	-26	6367	-26	-4349	3prime_fragment	FALSE	canonical	1	433650	junction_1	362446.03020049585	NA	0	NA	TRUE	NA	NA	NA	C	coding	1983	5949	412	6360	60.0	-15	True	NA	NA
PB.8196.3	chr3	+	8014	46	novel_in_catalog	FLNB	novel	8079	47	NA	NA	-7	0	intron_retention	FALSE	canonical	1	122953	junction_25	329665.9080562414	NA	3	NA	TRUE	NA	NA	NA	C	coding	2609	7830	173	8002	30.0	-29	False	AAAACA	-9
PB.8196.2	chr3	+	9411	45	full-splice_match	FLNB	ENST00000358537.7	9391	45	-23	3	-23	-3	multi-exon	FALSE	canonical	1	241381	junction_1	286510.2788444361	NA	0	NA	TRUE	NA	NA	NA	C	coding	2578	7737	189	7925	15.0	-45	False	AATAAA	-14
PB.8196.1	chr3	+	7958	45	full-splice_match	FLNB	ENST00000358537.7	9391	45	-36	1469	-36	5	multi-exon	TRUE	canonical	1	241381	junction_1	286510.2788444361	NA	1	NA	TRUE	NA	NA	NA	C	coding	2578	7737	202	7938	15.0	-58	False	AAAACA	-17
PB.6467.11	chr2	+	7162	33	novel_in_catalog	SPTBN1	novel	8482	36	NA	NA	-12	-3615	combination_of_known_junctions	FALSE	canonical	1	433650	junction_1	403272.649377792	NA	0	NA	TRUE	NA	NA	NA	C	coding	2255	6765	398	7162	60.0	-1	True	NA	NA
PB.3591.11	chr14	-	3592	12	full-splice_match	SPTLC2	ENST00000216484.6	8170	12	110	4468	110	1876	multi-exon	FALSE	canonical	1	191064	junction_11	71037.92886041132	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	85	1773	25.0	-27	True	NA	NA
PB.3591.10	chr14	-	6560	12	full-splice_match	SPTLC2	ENST00000216484.6	8170	12	103	1507	103	-1507	multi-exon	FALSE	canonical	1	191064	junction_11	71037.92886041132	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	92	1780	35.0	-34	True	NA	NA
PB.3591.12	chr14	-	2024	12	full-splice_match	SPTLC2	ENST00000216484.6	8170	12	123	6023	123	321	multi-exon	FALSE	canonical	1	191064	junction_11	71037.92886041132	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	72	1760	35.0	-14	True	ATTAAA	-17
PB.632.4	chr1	-	3222	20	novel_not_in_catalog	TRIM33	novel	8339	20	NA	NA	292	-14	any annotated donor/acceptor	FALSE	canonical	1	5981	junction_10	86905.5789651226	NA	2	NA	TRUE	NA	NA	NA	B	coding	478	1437	1760	3196	85.0	334	False	AGTAAA	-26
PB.1225.16	chr1	+	4730	9	novel_in_catalog	LGALS8	novel	799	5	NA	NA	3	-18	intron_retention	FALSE	canonical	1	311421	junction_2	81064.34186766398	NA	3	NA	TRUE	NA	NA	NA	C	coding	199	600	177	776	90.0	7	True	NA	NA
PB.11307.15	chr8	-	3285	14	full-splice_match	RAD21	ENST00000297338.6	3749	14	96	368	96	-368	multi-exon	FALSE	canonical	1	430119	junction_13	466275.78548679256	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	193	2088	60.0	5	True	NA	NA
PB.11711.5	chr9	-	4037	25	novel_in_catalog	PTPN3	novel	587	2	NA	NA	0	-2538	combination_of_known_junctions	FALSE	canonical	1	34828	junction_24	35076.68036592197	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	113	2719	30.0	-7	True	AATAAA	-15
PB.8777.8	chr4	-	3342	10	novel_in_catalog	USP46	novel	7954	9	NA	NA	1	1123	combination_of_known_junctions	FALSE	canonical	1	8840	junction_8	64717.08214820703	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	641	1393	30.0	-42	False	ATTAAA	-17
PB.8777.9	chr4	-	3245	9	novel_in_catalog	USP46	novel	7954	9	NA	NA	-2	1117	combination_of_known_junctions	FALSE	canonical	1	7112	junction_1	53969.030477991495	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	143	1168	40.0	0	True	ATTAAA	-11
PB.8777.6	chr4	-	3963	9	full-splice_match	USP46	ENST00000441222.7	7954	9	37	3954	0	-748	multi-exon	FALSE	canonical	1	122858	junction_1	23557.453926185975	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	149	1249	15.0	-6	True	AGTAAA	-19
PB.5022.1	chr17	+	1426	2	full-splice_match	ARL4D	ENST00000320033.4	1612	2	-13	199	-13	-199	multi-exon	FALSE	canonical	1	299039	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	201	606	221	826	10.0	-163	False	ATTAAA	-19
PB.8777.4	chr4	-	4454	9	full-splice_match	USP46	ENST00000441222.7	7954	9	60	3440	0	-234	multi-exon	FALSE	canonical	1	122858	junction_1	23557.453926185975	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	126	1226	10.0	17	True	ATTAAA	-28
PB.8777.5	chr4	-	4325	9	full-splice_match	USP46	ENST00000441222.7	7954	9	40	3589	3	-383	multi-exon	FALSE	canonical	1	122858	junction_1	23557.453926185975	NA	15	NA	TRUE	NA	NA	NA	C	coding	366	1101	146	1246	20.0	-3	True	ATTAAA	-10
PB.8777.2	chr4	-	4767	9	novel_in_catalog	USP46	novel	7954	9	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	7112	junction_1	53969.030477991495	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	144	1169	30.0	-1	True	NA	NA
PB.8777.3	chr4	-	4160	10	novel_not_in_catalog	USP46	novel	7954	9	NA	NA	-3	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	53164.122916042725	NA	1	1	TRUE	NA	NA	NA	C	coding	366	1101	144	1244	75.0	-1	True	NA	NA
PB.8777.1	chr4	-	4601	9	full-splice_match	USP46	ENST00000441222.7	7954	9	122	3231	62	-25	multi-exon	TRUE	canonical	1	122858	junction_1	23557.453926185975	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	64	1164	75.0	79	False	NA	NA
PB.8050.1	chr3	-	2490	12	full-splice_match	ANO10	ENST00000396091.7	2419	12	-38	-33	-11	22	multi-exon	FALSE	canonical	1	15692	junction_10	84873.99729263228	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	126	1910	25.0	5511	False	ATTAAA	-28
PB.9235.8	chr5	+	2915	12	full-splice_match	GPBP1	ENST00000506184.6	2857	12	-58	0	10	0	multi-exon	FALSE	canonical	1	285549	junction_1	250616.51210940647	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	1164	2585	35.0	-26	True	AATAAA	-20
PB.9235.9	chr5	+	2751	12	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-77	-3	any annotated donor/acceptor	FALSE	canonical	1	2427	junction_1	378763.89479661884	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	1516	2424	30.0	15	True	AATAAA	-17
PB.6511.7	chr2	-	1741	4	incomplete-splice_match	RAB1A	ENST00000409784.7	2447	6	0	2866	0	-1850	3prime_fragment	FALSE	canonical	1	674809	junction_2	229863.95031457677	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	192	662	90.0	-7	True	NA	NA
PB.11385.1	chr8	-	2590	2	incomplete-splice_match	NRBP2	ENST00000529747.5	3693	13	3627	122	730	-1	intron_retention	FALSE	canonical	1	225816	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	120	363	232	594	20.0	4661	False	NA	NA
PB.4226.20	chr16	-	2150	2	novel_not_in_catalog	GLYR1	novel	3606	14	NA	NA	1	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	coding	111	336	14	349	30.0	9	True	AATAAA	-13
PB.4226.21	chr16	-	3091	17	novel_not_in_catalog	GLYR1	novel	3606	14	NA	NA	1	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178755.92974779886	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	14	1675	20.0	9	True	AATAAA	-7
PB.4226.22	chr16	-	3020	16	full-splice_match	GLYR1	ENST00000321919.13	3772	16	43	709	-11	-658	multi-exon	FALSE	canonical	1	257539	junction_9	136798.80262237517	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	35	1696	65.0	-12	True	GGGGCT	-12
PB.4226.23	chr16	-	2948	15	novel_in_catalog	GLYR1	novel	3606	14	NA	NA	1	-658	intron_retention	FALSE	canonical	1	58926	junction_8	171572.3590815733	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	14	1624	65.0	9	True	GGGGCT	-12
PB.9235.6	chr5	+	2954	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-91	0	any annotated donor/acceptor	FALSE	canonical	1	10894	junction_2	366186.21651205915	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	1203	2624	35.0	1	True	AATAAA	-20
PB.9235.7	chr5	+	3390	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-88	-4	any annotated donor/acceptor	FALSE	canonical	1	65593	junction_1	321280.17398788786	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	1078	2559	20.0	4	True	AATAAA	-13
PB.9235.4	chr5	+	3798	12	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-96	456	any annotated donor/acceptor	FALSE	canonical	1	65593	junction_1	288262.7207254974	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	1086	2507	10.0	-4	True	AAAAAG	-18
PB.9235.5	chr5	+	2833	12	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-92	0	any annotated donor/acceptor	FALSE	canonical	1	65593	junction_1	288262.7207254974	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	1082	2503	35.0	0	True	AATAAA	-20
PB.8533.8	chr3	-	1336	10	full-splice_match	GNB4	ENST00000232564.7	6434	10	119	4979	5	19	multi-exon	FALSE	canonical	1	130618	junction_9	55707.21611633541	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	169	1191	50.0	-2	True	AGTAAA	-6
PB.857.1	chr1	+	2529	2	antisense	novelGene_SLAMF1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7166	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-54	False	NA	NA
PB.8533.9	chr3	-	3944	8	incomplete-splice_match	GNB4	ENST00000232564.7	6434	10	131	14234	17	2	3prime_fragment	FALSE	canonical	1	130618	junction_7	58673.90799971639	NA	4	NA	TRUE	NA	NA	NA	C	coding	236	711	157	867	20.0	10	True	NA	NA
PB.617.14	chr1	+	4154	6	novel_in_catalog	CAPZA1	novel	3020	10	NA	NA	-6896	-7	intron_retention	FALSE	canonical	1	270122	junction_5	216906.6324634634	NA	5	NA	TRUE	NA	NA	NA	C	coding	218	657	2018	2674	25.0	-4034	False	AATATA	-14
PB.8050.2	chr3	-	2581	12	novel_in_catalog	ANO10	novel	3212	13	NA	NA	-22	21	no_combination_of_known_junctions	FALSE	canonical	1	13136	junction_1	75783.69913518058	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	137	2002	30.0	-1	True	ATTAAA	-27
PB.617.15	chr1	+	1957	6	incomplete-splice_match	CAPZA1	ENST00000263168.3	3020	10	35456	8	-4700	-8	5prime_fragment	FALSE	canonical	1	270122	junction_5	216906.6324634634	NA	0	NA	TRUE	NA	NA	NA	C	coding	37	114	365	478	25.0	-1838	False	AATATA	-13
PB.2.1	chr1	-	2668	8	novel_not_in_catalog	AL627309.1	novel	2748	4	NA	NA	-47480	-265	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	10417.322071571809	NA	12	NA	TRUE	NA	NA	NA	A	coding	100	303	168	470	60.0	NA	False	ATTAAA	-27
PB.949.2	chr1	+	1202	6	full-splice_match	CACYBP	ENST00000367679.6	2766	6	113	1451	-99	180	multi-exon	FALSE	canonical	1	783	junction_2	169895.48244894564	NA	4	NA	TRUE	NA	NA	NA	C	coding	228	687	336	1022	40.0	-498	False	AATAAA	-12
PB.11307.17	chr8	-	2434	14	full-splice_match	RAD21	ENST00000297338.6	3749	14	97	1218	97	74	multi-exon	FALSE	canonical	1	430119	junction_13	466275.78548679256	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	192	2087	45.0	6	True	NA	NA
PB.12220.2	chrX	+	4370	6	full-splice_match	TMEM164	ENST00000372072.7	4975	6	14	591	14	-591	multi-exon	FALSE	canonical	1	31793	junction_1	72978.61723107667	NA	1	NA	TRUE	NA	NA	NA	C	coding	146	441	188	628	35.0	-484	False	AATAAA	-20
PB.11556.2	chr9	+	5397	1	full-splice_match	BX664615.1	ENST00000443558.1	458	1	-184	-4755	-184	4755	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AAGAAA	-17
PB.11156.7	chr8	+	5277	6	full-splice_match	YTHDF3	ENST00000621413.4	2370	6	-77	-2830	22	0	multi-exon	FALSE	canonical	1	18908	junction_2	189854.97158304811	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	432	2198	15.0	-761	False	AATAAA	-13
PB.10794.1	chr7	-	3079	3	full-splice_match	GPR85	ENST00000297146.7	5079	3	-35	2035	-12	-1	multi-exon	FALSE	canonical	1	1835	junction_2	13034.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	370	1113	640	1752	20.0	-67	False	TATAAA	-20
PB.10577.20	chr7	+	2978	9	novel_in_catalog	AC027644.4	novel	4139	13	NA	NA	111775	-1528	no_combination_of_known_junctions	FALSE	canonical	1	16612	junction_8	97002.25803871462	NA	2	NA	TRUE	NA	NA	NA	B	coding	371	1116	78	1193	30.0	0	True	ATTAAA	-14
PB.10577.22	chr7	+	2021	2	novel_not_in_catalog	AC027644.4	novel	4139	13	NA	NA	155388	-21507	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8050.3	chr3	-	2625	13	full-splice_match	ANO10	ENST00000292246.7	3212	13	79	508	-5	3	multi-exon	FALSE	canonical	1	121173	junction_12	53115.14855239563	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	93	2075	30.0	-8	True	CATAAA	-20
PB.11156.4	chr8	+	2917	5	novel_not_in_catalog	YTHDF3	novel	5193	6	NA	NA	4	473	any annotated donor/acceptor	FALSE	canonical	1	31217	junction_1	163402.74807569027	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	379	1983	15.0	-1	True	AATAAA	-22
PB.8891.4	chr4	-	1396	9	full-splice_match	ADH5	ENST00000296412.12	2615	9	38	1181	0	-7	multi-exon	FALSE	canonical	1	115329	junction_7	271360.2366121232	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	14	1138	20.0	16	True	AATAAA	-13
PB.6839.5	chr2	+	5733	26	full-splice_match	ITGA6	ENST00000264107.11	5618	26	108	-223	108	171	multi-exon	FALSE	canonical	1	344563	junction_15	107924.04382804788	NA	1	NA	TRUE	NA	NA	NA	C	coding	1073	3222	127	3348	25.0	-17	True	ATTAAA	-26
PB.6673.1	chr2	-	2636	1	genic	FHL2	novel	NA	NA	NA	NA	36796	446	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1440	False	NA	NA
PB.10147.4	chr6	-	2512	10	full-splice_match	SESN1	ENST00000356644.7	2676	10	3	161	3	-161	multi-exon	FALSE	canonical	1	96111	junction_9	63992.60237242319	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	93	1571	30.0	-1	True	AATAAA	-17
PB.10989.5	chr8	-	3139	13	novel_not_in_catalog	LONRF1	novel	3594	12	NA	NA	-25	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	67819.21518819763	NA	5	NA	TRUE	NA	NA	NA	B	coding	618	1857	96	1952	30.0	-11	True	AATAAA	-14
PB.8533.1	chr3	-	4881	11	novel_not_in_catalog	GNB4	novel	6434	10	NA	NA	-33	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	88609.45393579626	NA	3	1	TRUE	NA	NA	NA	C	coding	340	1023	207	1229	20.0	-8	True	AATAAA	-15
PB.10147.3	chr6	-	4406	9	novel_in_catalog	SESN1	novel	3509	10	NA	NA	3	-2	intron_retention	FALSE	canonical	1	96111	junction_8	66764.6829408146	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	2593	3306	25.0	-1	True	AATAAA	-16
PB.543.5	chr1	-	3786	5	full-splice_match	TMED5	ENST00000370290.7	3847	5	61	0	61	0	multi-exon	FALSE	canonical	1	36411	junction_2	310822.2660664572	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	597	974	50.0	689	False	AATAAA	-8
PB.8533.2	chr3	-	5231	11	novel_not_in_catalog	GNB4	novel	6434	10	NA	NA	47	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	88609.45393579626	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	241	1263	20.0	18	True	AATAAA	-15
PB.11556.3	chr9	+	1864	1	full-splice_match	BX664615.1	ENST00000443558.1	458	1	-182	-1224	-182	1224	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATACA	-13
PB.11156.3	chr8	+	5081	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	81	1	13	0	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	245	2002	15.0	-9	True	AATAAA	-13
PB.8533.3	chr3	-	4911	11	novel_not_in_catalog	GNB4	novel	6434	10	NA	NA	-53	-266	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	88609.45393579626	NA	5	1	TRUE	NA	NA	NA	C	coding	340	1023	227	1249	20.0	-28	True	ATTAAA	-20
PB.1189.1	chr1	+	6352	10	full-splice_match	URB2	ENST00000258243.6	5613	10	-53	-686	-53	686	multi-exon	FALSE	canonical	1	57010	junction_1	34922.86165391899	NA	2	NA	TRUE	NA	NA	NA	C	coding	1524	4575	190	4764	30.0	-107	False	TATAAA	-20
PB.8533.4	chr3	-	3179	10	full-splice_match	GNB4	ENST00000232564.7	6434	10	130	3125	16	1635	multi-exon	FALSE	canonical	1	130618	junction_9	55707.21611633541	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	158	1180	75.0	9	True	NA	NA
PB.8050.4	chr3	-	2812	14	novel_in_catalog	ANO10	novel	3212	13	NA	NA	27	12	combination_of_known_junctions	FALSE	canonical	1	8686	junction_4	96426.53559897971	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	143	2242	20.0	-7	True	ATTAAA	-18
PB.11156.1	chr8	+	5000	5	novel_not_in_catalog	YTHDF3	novel	5193	6	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	31217	junction_1	163402.74807569027	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	317	1921	15.0	-15	True	AATAAA	-13
PB.12109.1	chrX	-	1864	1	novel_in_catalog	SPIN2B	novel	1258	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	258	777	918	1694	20.0	-2	True	AATACA	-17
PB.8533.5	chr3	-	2824	10	full-splice_match	GNB4	ENST00000232564.7	6434	10	125	3485	11	1275	multi-exon	FALSE	canonical	1	130618	junction_9	55707.21611633541	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	163	1185	50.0	4	True	AATAAA	-31
PB.5924.7	chr19	+	2564	1	novel_in_catalog	FXYD5	novel	872	9	NA	NA	2464	-571	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-3328	False	NA	NA
PB.5924.6	chr19	+	3110	6	novel_in_catalog	FXYD5	novel	763	5	NA	NA	276	0	intron_retention	FALSE	canonical	1	2176162	junction_5	397531.83348778496	NA	1	1	TRUE	NA	NA	NA	C	coding	128	387	334	720	20.0	4	True	AGTAAA	-16
PB.5924.5	chr19	+	1161	8	full-splice_match	FXYD5	ENST00000342879.7	1580	8	420	-1	251	0	multi-exon	FALSE	canonical	1	2176162	junction_7	376340.37342121074	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	359	895	20.0	-21	True	AGTAAA	-17
PB.5924.4	chr19	+	4211	8	novel_in_catalog	FXYD5	novel	763	5	NA	NA	3	0	intron_retention	FALSE	canonical	1	2152756	junction_1	378318.48485510354	NA	9	1	TRUE	NA	NA	NA	C	coding	115	348	3598	3945	20.0	21	True	AGTAAA	-17
PB.5924.3	chr19	+	917	9	full-splice_match	FXYD5	ENST00000541435.6	898	9	3	-22	3	0	multi-exon	FALSE	canonical	1	196923	junction_1	895624.5294981231	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	115	651	20.0	21	True	AGTAAA	-17
PB.2519.23	chr12	+	4089	14	full-splice_match	STK38L	ENST00000389032.7	5068	14	112	867	1	-867	multi-exon	FALSE	canonical	1	182244	junction_1	63943.34343230557	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	64	1452	20.0	-6	True	ATTAAA	-18
PB.5924.1	chr19	+	3506	2	incomplete-splice_match	FXYD5	ENST00000392218.6	763	5	-13	1036	-13	-1036	intron_retention	FALSE	canonical	1	2152756	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	1227	1580	65.0	-18	True	NA	NA
PB.8942.12	chr4	+	4477	15	incomplete-splice_match	ALPK1	ENST00000177648.13	4537	16	16	141	1	7	intron_retention	FALSE	canonical	1	17860	junction_2	23268.040541432685	NA	0	NA	TRUE	NA	NA	NA	C	coding	1245	3738	185	3922	30.0	-15	True	NA	NA
PB.12220.8	chrX	+	5635	7	full-splice_match	TMEM164	ENST00000372068.6	5566	7	-66	-3	-47	-1	multi-exon	FALSE	canonical	1	76712	junction_1	52487.01147506241	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	406	1299	15.0	-85	False	ATTAAA	-13
PB.8050.5	chr3	-	2802	13	novel_not_in_catalog	ANO10	novel	3212	13	NA	NA	-5465	8	any annotated donor/acceptor	FALSE	canonical	1	717	junction_12	79808.01387544397	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	200	2236	20.0	0	True	ATTAAA	-14
PB.7110.69	chr2	+	3816	13	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-13	0	intron_retention	FALSE	canonical	1	3978	junction_2	1064939.32496693	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	479	1729	25.0	-1564	False	AATAAA	-20
PB.789.1	chr1	+	1763	8	full-splice_match	FLAD1	ENST00000315144.14	1730	8	-33	0	-12	0	multi-exon	TRUE	canonical	1	284491	junction_3	81622.11197903646	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	217	1689	5.0	-18	True	AATAAA	-18
PB.789.2	chr1	+	2172	7	full-splice_match	FLAD1	ENST00000292180.7	2160	7	-13	1	1	-1	multi-exon	FALSE	canonical	1	284491	junction_2	86381.42510481573	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	627	2099	5.0	16	True	AATAAA	-17
PB.1668.18	chr10	-	2531	16	incomplete-splice_match	SHTN1	ENST00000392903.3	2400	17	390	703	178	-703	3prime_fragment	FALSE	canonical	1	205832	junction_2	44260.18957252167	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	109	1785	45.0	-2	True	ATTAAA	-22
PB.417.1	chr1	-	2234	9	novel_not_in_catalog	AL606760.2	novel	835	3	NA	NA	-6847	-2444	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	260472.27073886266	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	48	530	50.0	-19	True	AATAAA	-17
PB.1668.15	chr10	-	2986	14	novel_not_in_catalog	SHTN1	novel	6730	15	NA	NA	93	161	any annotated donor/acceptor	FALSE	canonical	1	225	junction_1	91045.3247909195	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	17	1468	35.0	-1	True	AATAAA	-17
PB.1668.12	chr10	-	3480	17	novel_not_in_catalog	SHTN1	novel	6730	15	NA	NA	8	161	any annotated donor/acceptor	FALSE	canonical	1	3005	junction_1	82744.59705489744	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	279	2000	35.0	-1	True	AATAAA	-17
PB.1668.10	chr10	-	4482	17	novel_not_in_catalog	SHTN1	novel	6730	15	NA	NA	83	1249	any annotated donor/acceptor	FALSE	canonical	1	3389	junction_1	82665.09734330048	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1815	204	2018	40.0	-3	True	NA	NA
PB.954.13	chr1	-	2574	18	novel_not_in_catalog	COP1	novel	2131	9	NA	NA	-152	-1	any annotated donor/acceptor	FALSE	canonical	1	12042	junction_15	143687.50961842862	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	953	2254	25.0	8	True	AATAAA	-36
PB.5473.6	chr18	-	2702	18	novel_in_catalog	DYM	novel	5049	17	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	3364	junction_15	120767.91499400824	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	804	2453	25.0	-52	True	AATAAA	-17
PB.5473.7	chr18	-	2878	4	incomplete-splice_match	DYM	ENST00000577481.5	567	5	-85	9400	-9	1574	3prime_fragment	FALSE	canonical	1	6607	junction_1	132942.565887178	NA	9	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-86	True	AATAAA	-22
PB.5473.4	chr18	-	2621	17	full-splice_match	DYM	ENST00000269445.10	5049	17	98	2330	10	0	multi-exon	FALSE	canonical	1	249342	junction_16	58750.50008297802	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	361	2370	30.0	-67	True	AATAAA	-19
PB.5473.5	chr18	-	2728	18	novel_in_catalog	DYM	novel	5049	17	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	2780	junction_2	119422.1112992462	NA	4	NA	TRUE	NA	NA	NA	C	coding	604	1815	361	2175	25.0	-67	True	AATAAA	-18
PB.5473.2	chr18	-	3298	17	full-splice_match	DYM	ENST00000269445.10	5049	17	79	1672	-9	523	multi-exon	FALSE	canonical	1	249342	junction_16	58750.50008297802	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	380	2389	90.0	-86	True	NA	NA
PB.5473.3	chr18	-	2719	18	novel_not_in_catalog	DYM	novel	5049	17	NA	NA	-19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	120512.07524614074	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2238	341	2578	30.0	-47	True	AATAAA	-19
PB.8050.6	chr3	-	2692	13	novel_in_catalog	ANO10	novel	3212	13	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	1	1302	junction_12	79666.3720480954	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	146	2128	20.0	5627	False	ATTAAA	-12
PB.5473.1	chr18	-	3419	17	full-splice_match	DYM	ENST00000269445.10	5049	17	79	1551	-9	644	multi-exon	FALSE	canonical	1	249342	junction_16	58750.50008297802	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	380	2389	30.0	-86	True	ATTAAA	-19
PB.3821.1	chr15	-	5589	30	full-splice_match	PPIP5K1	ENST00000360301.8	5565	30	-32	8	-6	5	multi-exon	FALSE	canonical	1	131	junction_28	41503.703806383804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1408	4227	159	4385	20.0	NA	False	AATAAA	-22
PB.7110.68	chr2	+	2376	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-14	-69	intron_retention	FALSE	canonical	1	56649	junction_1	997498.777650889	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	671	1756	40.0	-1565	False	AATAAA	-22
PB.9670.1	chr5	-	2383	16	novel_not_in_catalog	MGAT4B	novel	1568	12	NA	NA	3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	449996.0753443474	NA	0	NA	TRUE	NA	NA	NA	A	coding	548	1647	305	1951	25.0	-1	True	AATAAA	-10
PB.3821.2	chr15	-	5462	29	novel_in_catalog	PPIP5K1	novel	5433	28	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	1	131	junction_27	41257.11513309998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1366	4101	159	4259	20.0	NA	False	AATAAA	-21
PB.11622.4	chr9	-	2000	8	novel_not_in_catalog	KIF27	novel	4653	18	NA	NA	8	-8388	any annotated donor/acceptor	FALSE	canonical	1	416	junction_3	10794.682668720157	NA	0	NA	TRUE	NA	NA	NA	B	coding	608	1824	175	1998	40.0	-26	True	NA	NA
PB.11622.1	chr9	-	2906	12	novel_not_in_catalog	KIF27	novel	4653	18	NA	NA	-51	-256	any annotated donor/acceptor	FALSE	canonical	1	416	junction_6	12236.71240959112	NA	1	NA	TRUE	NA	NA	NA	B	coding	855	2565	341	2905	65.0	13	True	NA	NA
PB.8765.1	chr4	-	1407	5	full-splice_match	COMMD8	ENST00000381571.5	1469	5	-11	73	-11	-73	multi-exon	FALSE	canonical	1	222092	junction_4	71927.75315203443	NA	0	NA	TRUE	NA	NA	NA	A	coding	183	552	80	631	25.0	9497	False	AATAAA	-17
PB.11622.3	chr9	-	2353	12	novel_not_in_catalog	KIF27	novel	4653	18	NA	NA	-9	-256	any annotated donor/acceptor	FALSE	canonical	1	416	junction_6	13194.790888643947	NA	0	NA	TRUE	NA	NA	NA	B	coding	497	1491	862	2352	65.0	-43	True	NA	NA
PB.5368.1	chr18	+	883	4	full-splice_match	MYL12B	ENST00000237500.9	1210	4	226	101	226	-101	multi-exon	FALSE	canonical	1	2879419	junction_2	1234123.0794742026	NA	0	NA	TRUE	NA	NA	NA	A	coding	172	519	119	637	40.0	-5	True	AATAAA	-24
PB.2377.2	chr11	-	5612	35	full-splice_match	NCAPD3	ENST00000534548.6	5061	35	-557	6	-3	-6	multi-exon	TRUE	canonical	1	184389	junction_33	83445.61391727634	NA	0	NA	TRUE	NA	NA	NA	C	coding	1498	4497	623	5119	30.0	-3	True	AATAAA	-12
PB.1259.5	chr1	-	2543	10	novel_in_catalog	ZNF692	novel	2704	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	104376	junction_9	125835.56439032686	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	1394	2341	25.0	-1	True	AATAAA	-15
PB.9662.2	chr5	+	2954	7	novel_in_catalog	ZNF354B	novel	2802	5	NA	NA	0	28	combination_of_known_junctions	FALSE	canonical	1	22974	junction_6	32282.49370659997	NA	1	1	TRUE	NA	NA	NA	C	coding	612	1839	227	2065	30.0	-47	True	NA	NA
PB.8050.7	chr3	-	2574	12	novel_in_catalog	ANO10	novel	3212	13	NA	NA	-2	3	no_combination_of_known_junctions	FALSE	canonical	1	4579	junction_5	86471.73996464045	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	117	2024	30.0	5520	False	CATAAA	-20
PB.11273.6	chr8	-	2555	5	full-splice_match	ANKRD46	ENST00000335659.7	2649	5	0	94	0	-90	multi-exon	FALSE	canonical	1	114657	junction_4	48465.67150829543	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	180	866	15.0	-1	True	TTTAAA	-5
PB.11035.1	chr8	+	1538	8	full-splice_match	R3HCC1	ENST00000265806.10	1773	8	203	32	-13	-32	multi-exon	FALSE	canonical	1	250568	junction_1	71861.02517146466	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	627	1388	60.0	3	True	NA	NA
PB.11273.4	chr8	-	2814	5	novel_in_catalog	ANKRD46	novel	1686	6	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	5984	junction_4	90442.04961016474	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	347	1033	20.0	11	True	AATAAA	-19
PB.4827.4	chr17	+	2598	10	full-splice_match	ALDH3A2	ENST00000176643.10	3928	10	225	1105	0	-34	multi-exon	FALSE	canonical	1	516062	junction_1	111283.65284008293	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	222	1679	65.0	-27	True	NA	NA
PB.10984.1	chr8	+	2316	6	full-splice_match	NEIL2	ENST00000455213.6	2323	6	11	-4	0	-1	multi-exon	TRUE	canonical	1	10363	junction_1	50725.20213700484	NA	2	NA	TRUE	NA	NA	NA	C	coding	332	999	247	1245	5.0	-8	True	AATAAA	-16
PB.8459.11	chr3	+	3575	16	novel_in_catalog	HPS3	novel	4665	17	NA	NA	-24	-2	no_combination_of_known_junctions	FALSE	canonical	1	4107	junction_10	71971.52984235426	NA	1	NA	TRUE	NA	NA	NA	C	coding	926	2781	58	2838	25.0	15	True	AATAAA	-22
PB.12289.1	chrX	+	4248	5	novel_in_catalog	FHL1	novel	1501	7	NA	NA	13	0	intron_retention	FALSE	canonical	1	261814	junction_1	1021371.5237190566	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	252	668	20.0	-18	True	AATAAA	-11
PB.12289.2	chrX	+	2397	7	full-splice_match	FHL1	ENST00000370690.7	2441	7	40	4	-28	1	multi-exon	FALSE	canonical	1	261814	junction_1	1097053.1693022626	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	225	1067	5.0	9	True	AATAAA	-17
PB.302.7	chr1	-	3066	25	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	68296.50646257872	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	87	2855	10.0	1	True	GATAAA	-17
PB.690.1	chr1	-	1905	1	antisense	novelGene_NBPF12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-686694	True	NA	NA
PB.227.5	chr1	+	2204	9	novel_in_catalog	RCC1	novel	2715	12	NA	NA	-23	-2	no_combination_of_known_junctions	FALSE	canonical	1	10576	junction_7	301389.8849948922	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	10	1230	35.0	-21	True	AATAAA	-12
PB.11709.1	chr9	-	2270	18	novel_in_catalog	CTNNAL1	novel	2522	19	NA	NA	13	0	no_combination_of_known_junctions	TRUE	canonical	1	14991	junction_17	169895.1859421722	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	399	2072	30.0	-1	True	AATAAA	-24
PB.3474.14	chr14	+	2073	8	incomplete-splice_match	PCNX4	ENST00000317623.8	17339	10	246	23551	-29	397	3prime_fragment	FALSE	canonical	1	83263	junction_1	72114.81976030464	NA	2	NA	TRUE	NA	NA	NA	C	coding	599	1797	277	2073	75.0	-40	True	NA	NA
PB.5789.1	chr19	+	2317	15	novel_not_in_catalog	CLEC17A	novel	2065	13	NA	NA	0	877	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	46375.28916885477	NA	3	2	TRUE	NA	NA	NA	A	coding	378	1137	78	1214	10.0	0	True	NA	NA
PB.11709.4	chr9	-	3491	1	genic	CTNNAL1	novel	NA	NA	NA	NA	-5	-18148	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	109	330	93	422	85.0	-36	True	NA	NA
PB.5243.1	chr17	+	1722	4	full-splice_match	MRPS7	ENST00000579002.5	1638	4	-33	-51	-33	8	multi-exon	FALSE	canonical	1	1172502	junction_3	187652.8460061883	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	449	1264	10.0	-15	True	TATAAA	-24
PB.12308.1	chrX	+	3416	15	full-splice_match	MTM1	ENST00000370396.6	3593	15	-4	181	-4	-181	multi-exon	FALSE	canonical	1	34715	junction_1	23673.578044490263	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	59	1870	20.0	-6	True	AATAAA	-18
PB.5243.3	chr17	+	3499	5	full-splice_match	MRPS7	ENST00000245539.10	1406	5	205	-2298	-33	2298	multi-exon	FALSE	canonical	1	990924	junction_1	232617.33810273043	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	23	751	95.0	-15	True	NA	NA
PB.12308.3	chrX	+	3161	15	full-splice_match	MTM1	ENST00000370396.6	3593	15	-16	448	-16	0	multi-exon	FALSE	canonical	1	34715	junction_1	23673.578044490263	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	71	1882	30.0	-18	True	ATTAAA	-17
PB.12308.4	chrX	+	3601	15	novel_in_catalog	MTM1	novel	3593	15	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	8153	junction_14	33149.335381108074	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	67	1875	25.0	-14	True	ATTAAA	-21
PB.12308.5	chrX	+	3528	15	novel_not_in_catalog	MTM1	novel	3593	15	NA	NA	64	-181	any annotated donor/acceptor	FALSE	canonical	1	121	junction_1	31039.74565663468	NA	19	NA	TRUE	NA	NA	NA	C	coding	603	1812	171	1982	20.0	82	False	AATAAA	-18
PB.8779.6	chr4	+	1765	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-57	-49	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	226310.96955574694	NA	4	NA	TRUE	NA	NA	NA	C	coding	504	1512	254	1765	70.0	-168	False	NA	NA
PB.8779.7	chr4	+	2234	18	full-splice_match	FIP1L1	ENST00000337488.10	2198	18	-31	-5	-29	5	multi-exon	FALSE	canonical	1	161024	junction_1	220806.79141835874	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	226	2010	50.0	0	True	AATAAA	-24
PB.8779.8	chr4	+	2139	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	213216.39660756043	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	176	1915	50.0	21	True	AATAAA	-24
PB.8779.9	chr4	+	1763	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-29	-47	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	226991.9733657754	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1536	226	1761	70.0	0	True	NA	NA
PB.267.2	chr1	+	2333	11	novel_not_in_catalog	AZIN2	novel	778	5	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	963	junction_2	22422.590381131256	NA	4	NA	TRUE	NA	NA	NA	B	coding	460	1383	603	1985	25.0	-2	True	AATAAA	-27
PB.11614.8	chr9	+	2755	15	novel_in_catalog	CEP78	novel	11198	16	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	16821	junction_1	56970.383405345274	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	593	2452	20.0	-5	True	AATAAA	-15
PB.4334.3	chr16	-	1791	15	full-splice_match	CLN3	ENST00000568452.6	1616	15	-9	-166	-1	-2	multi-exon	FALSE	canonical	1	151891	junction_14	109205.10330939817	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	113	1078	15.0	18	True	AATAAA	-17
PB.4334.2	chr16	-	1905	16	full-splice_match	CLN3	ENST00000636147.1	3832	16	-3	1930	-3	-1	multi-exon	FALSE	canonical	1	151891	junction_15	111425.80169689405	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	354	1670	15.0	3248	False	AATAAA	-18
PB.4261.2	chr16	-	2996	23	novel_in_catalog	PARN	novel	3078	24	NA	NA	-3	0	no_combination_of_known_junctions	TRUE	canonical	1	5578	junction_11	110394.18354543514	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	139	1980	0.0	-4	True	ATTAAA	-16
PB.4261.3	chr16	-	2990	23	novel_in_catalog	PARN	novel	3078	24	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	18588	junction_4	108923.77115334618	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	143	1975	5.0	-8	True	ATTAAA	-15
PB.4261.1	chr16	-	3046	24	full-splice_match	PARN	ENST00000437198.6	3078	24	0	32	0	-32	multi-exon	FALSE	canonical	1	179529	junction_23	77500.74485691206	NA	2	NA	TRUE	NA	NA	NA	C	coding	639	1920	143	2062	70.0	-8	True	AATAAA	-19
PB.4261.6	chr16	-	2990	24	full-splice_match	PARN	ENST00000341484.11	2100	24	13	-903	-3	-1	multi-exon	FALSE	canonical	1	10266	junction_23	101304.04802232182	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	239	1975	5.0	-4	True	ATTAAA	-15
PB.4261.4	chr16	-	3130	24	novel_not_in_catalog	PARN	novel	3078	24	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	938	junction_12	150855.3065499513	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	1135	2115	5.0	-1	True	ATTAAA	-15
PB.5352.1	chr17	-	1738	6	full-splice_match	RAB40B	ENST00000571995.5	3859	6	25	2096	-16	-1	multi-exon	FALSE	canonical	1	90299	junction_4	48661.67622267034	NA	0	NA	TRUE	NA	NA	NA	A	coding	278	837	108	944	15.0	-39	True	AATAAA	-24
PB.4261.8	chr16	-	2744	24	full-splice_match	PARN	ENST00000437198.6	3078	24	1	333	1	239	multi-exon	FALSE	canonical	1	179529	junction_23	77500.74485691206	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	142	2061	10.0	-7	True	AGTAAA	-20
PB.4261.9	chr16	-	1970	23	incomplete-splice_match	PARN	ENST00000437198.6	3078	24	4	11219	-3	37	3prime_fragment	FALSE	canonical	1	179529	junction_22	79002.5148194245	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1830	139	1968	60.0	-4	True	AAAAAG	-12
PB.6858.2	chr2	+	2114	2	novel_not_in_catalog	HOXD1	novel	1975	2	NA	NA	89	0	any annotated donor/acceptor	FALSE	canonical	1	2918	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	135	1349	10.0	0	True	AATAAA	-16
PB.8308.1	chr3	-	3841	16	novel_in_catalog	CCDC191	novel	3976	17	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	1	3178	junction_15	13497.642727528388	NA	3	NA	TRUE	NA	NA	NA	C	coding	923	2772	54	2825	15.0	6	True	AATAAA	-21
PB.8308.2	chr3	-	3896	17	full-splice_match	CCDC191	ENST00000295878.7	3976	17	77	3	3	-3	multi-exon	FALSE	canonical	1	6713	junction_15	14585.26484897836	NA	4	1	TRUE	NA	NA	NA	C	coding	936	2811	71	2881	15.0	-11	True	AATAAA	-20
PB.5142.6	chr17	-	5390	19	novel_not_in_catalog	MTMR4	novel	5622	18	NA	NA	16	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	101991.57360245168	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	202	3831	5.0	-1	True	AATAAA	-20
PB.10718.8	chr7	-	2267	15	novel_not_in_catalog	TAF6	novel	2685	15	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	208058.75440174126	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	218	2173	15.0	-8	True	AATAAA	-19
PB.6839.2	chr2	+	5380	25	full-splice_match	ITGA6	ENST00000409080.5	5306	25	-82	8	-82	-8	multi-exon	FALSE	canonical	1	216744	junction_24	121940.28430165196	NA	12	1	TRUE	NA	NA	NA	C	coding	1091	3276	83	3358	35.0	27	False	TATAAA	-27
PB.3922.2	chr15	-	1424	4	full-splice_match	PCLAF	ENST00000300035.8	2194	4	68	702	-1	352	multi-exon	FALSE	canonical	1	813546	junction_1	315648.61759276286	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	72	407	95.0	-2	True	NA	NA
PB.3922.1	chr15	-	1792	4	full-splice_match	PCLAF	ENST00000300035.8	2194	4	8	394	8	-394	multi-exon	FALSE	canonical	1	813546	junction_1	315648.61759276286	NA	1	NA	TRUE	NA	NA	NA	C	coding	111	336	132	467	90.0	9453	False	NA	NA
PB.11631.9	chr9	-	5725	28	novel_not_in_catalog	TUT7	novel	5724	28	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	canonical	1	25856	junction_2	88648.10362039594	NA	3	NA	TRUE	NA	NA	NA	C	coding	1478	4437	233	4669	30.0	28	True	AATAAA	-18
PB.6750.5	chr2	-	1715	3	full-splice_match	LYPD1	ENST00000345008.6	1033	3	82	-764	82	-170	multi-exon	FALSE	canonical	1	31647	junction_2	53871.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	63	192	162	353	30.0	-1	True	AATAAA	-6
PB.10562.4	chr7	-	2803	2	novel_in_catalog	ZNF680	novel	3022	4	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	21206	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	506	1522	35.0	-36	False	ATTAAA	-18
PB.10562.5	chr7	-	3324	5	novel_in_catalog	ZNF680	novel	3022	4	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	4218	junction_3	37174.3517117313	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	575	2044	35.0	-7	True	ATTAAA	-17
PB.10562.6	chr7	-	3130	5	novel_not_in_catalog	ZNF680	novel	3022	4	NA	NA	13	3	any annotated donor/acceptor	FALSE	canonical	1	33	junction_1	35695.36289474447	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	834	1850	35.0	-23	False	ATTAAA	-17
PB.6381.1	chr2	+	3275	13	novel_in_catalog	ZNF512	novel	3543	13	NA	NA	3	-3	no_combination_of_known_junctions	FALSE	canonical	1	10738	junction_5	110866.70664094664	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	701	1645	25.0	1	True	AATAAA	-11
PB.4773.29	chr17	-	1795	14	full-splice_match	GAS7	ENST00000585266.5	3535	14	56	1684	10	51	multi-exon	FALSE	canonical	1	39836	junction_13	94000.75847679643	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	256	1506	10.0	-5	True	NA	NA
PB.4773.28	chr17	-	3308	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	-36	-304	any annotated donor/acceptor	FALSE	canonical	1	2222	junction_13	136932.6755376719	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	596	1639	45.0	45	False	AATATA	-3
PB.10562.2	chr7	-	3183	5	novel_not_in_catalog	ZNF680	novel	3022	4	NA	NA	0	4	any annotated donor/acceptor	FALSE	canonical	1	1720	junction_1	35852.34026095786	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	886	1902	35.0	-5	True	ATTAAA	-18
PB.10562.3	chr7	-	3015	4	full-splice_match	ZNF680	ENST00000309683.10	3022	4	11	-4	11	4	multi-exon	FALSE	canonical	1	44469	junction_3	18464.557875983803	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	142	1734	35.0	-25	False	ATTAAA	-18
PB.4773.27	chr17	-	3014	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7054	-295	any annotated donor/acceptor	FALSE	canonical	1	38	junction_13	101952.73668448346	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	98	1336	20.0	7021	False	AGTAAA	-2
PB.4773.26	chr17	-	3045	13	novel_in_catalog	GAS7	novel	8003	14	NA	NA	6	-295	combination_of_known_junctions	FALSE	canonical	1	1838	junction_12	124144.63907035907	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	324	1367	20.0	0	True	AGTAAA	-2
PB.4773.21	chr17	-	3239	13	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7187	-294	any annotated donor/acceptor	FALSE	canonical	1	19749	junction_12	121132.53647199372	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	826	1560	20.0	7154	False	AGTAAA	-3
PB.4773.20	chr17	-	3392	15	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	-24	-294	any annotated donor/acceptor	FALSE	canonical	1	2222	junction_14	119762.4805762452	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	475	1713	20.0	57	False	AGTAAA	-3
PB.4773.23	chr17	-	2984	12	novel_in_catalog	GAS7	novel	8003	14	NA	NA	5	-294	no_combination_of_known_junctions	FALSE	canonical	1	573	junction_10	125697.52396444963	NA	10	2	TRUE	NA	NA	NA	C	coding	290	873	433	1305	20.0	-1	True	AGTAAA	-3
PB.4773.22	chr17	-	3139	14	novel_in_catalog	GAS7	novel	8003	14	NA	NA	-1	-294	combination_of_known_junctions	FALSE	canonical	1	1838	junction_13	101582.61790024638	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	222	1460	20.0	-7	True	AGTAAA	-3
PB.6476.36	chr2	-	2887	17	full-splice_match	PPP4R3B	ENST00000616407.1	4385	17	-93	1591	-67	-1591	multi-exon	FALSE	canonical	1	146496	junction_8	100630.56562013026	NA	1	NA	TRUE	NA	NA	NA	C	coding	830	2490	397	2886	60.0	-8	True	NA	NA
PB.6476.37	chr2	-	2782	16	full-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-72	1600	-66	-1599	multi-exon	FALSE	canonical	1	188789	junction_7	86824.2422797279	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2385	396	2780	45.0	-7	True	TTTAAA	-41
PB.6476.34	chr2	-	3304	16	full-splice_match	PPP4R3B	ENST00000616288.4	4310	16	-29	1035	-23	-1034	multi-exon	FALSE	canonical	1	188789	junction_7	86824.2422797279	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	353	2806	20.0	1213	False	ATTAAA	-11
PB.6476.35	chr2	-	3345	17	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-2	-1047	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_3	118462.84131585313	NA	7	1	TRUE	NA	NA	NA	C	coding	842	2529	332	2860	55.0	-13	True	AAGAAA	-31
PB.1736.8	chr11	+	4204	12	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	7	0	intron_retention	FALSE	canonical	1	43522	junction_1	204349.07757224672	NA	0	NA	TRUE	NA	NA	NA	B	coding	432	1299	1972	3270	10.0	-20	False	ATTAAA	-29
PB.6476.33	chr2	-	3443	17	full-splice_match	PPP4R3B	ENST00000616407.1	4385	17	-92	1034	-66	-1034	multi-exon	FALSE	canonical	1	146496	junction_8	100630.56562013026	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	396	2945	20.0	-7	True	ATTAAA	-11
PB.6476.31	chr2	-	3265	16	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-4	-1033	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_3	111774.33034674026	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	334	2766	20.0	-15	True	ATTAAA	-12
PB.1736.4	chr11	+	2396	14	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-36	36	intron_retention	FALSE	canonical	1	43522	junction_1	199360.6488307978	NA	0	NA	TRUE	NA	NA	NA	B	coding	737	2214	164	2377	10.0	-66	False	NA	NA
PB.1736.5	chr11	+	3275	13	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	812	junction_8	231313.1435518833	NA	4	2	TRUE	NA	NA	NA	B	coding	359	1080	756	1835	20.0	-11	True	ATTAAA	-21
PB.1736.6	chr11	+	4309	11	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-10	1	intron_retention	FALSE	canonical	1	43522	junction_1	205823.47904697366	NA	3	NA	TRUE	NA	NA	NA	B	coding	240	723	1992	2714	15.0	-1	True	ATTAAA	-23
PB.1736.7	chr11	+	3908	11	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	214987.91939399758	NA	2	1	TRUE	NA	NA	NA	B	coding	240	723	1593	2315	20.0	2	True	ATTAAA	-21
PB.1736.1	chr11	+	3398	13	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-40	6	intron_retention	FALSE	canonical	1	43522	junction_1	201556.26589013895	NA	0	NA	TRUE	NA	NA	NA	B	coding	560	1683	776	2458	5.0	-70	False	ATTAAA	-35
PB.12295.1	chrX	-	2399	5	full-splice_match	FGF13	ENST00000315930.10	19519	5	272	16848	272	-5	multi-exon	FALSE	canonical	1	49271	junction_4	37564.93991326886	NA	3	NA	TRUE	NA	NA	NA	A	coding	245	738	391	1128	50.0	323	False	AATAAA	-17
PB.1736.3	chr11	+	4177	13	novel_not_in_catalog	PGGHG	novel	4418	11	NA	NA	-37	3	intron_retention	FALSE	canonical	1	43522	junction_1	202747.60494233752	NA	1	NA	TRUE	NA	NA	NA	B	coding	432	1299	1942	3240	10.0	-67	False	ATTAAA	-32
PB.11584.2	chr9	+	2934	15	novel_in_catalog	CBWD5	novel	541	4	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	1137.956627343189	NA	3	1	TRUE	NA	NA	NA	C	coding	180	543	109	651	20.0	NA	False	AATAAA	-16
PB.11285.9	chr8	+	5634	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-13	-3491	1	5	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	177	1325	35.0	6	True	AATAAA	-21
PB.3809.3	chr15	-	1706	6	full-splice_match	LRRC57	ENST00000397130.7	2384	6	-13	691	7	-689	multi-exon	FALSE	canonical	1	110976	junction_5	40107.94546420946	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	117	836	75.0	-1	True	NA	NA
PB.3809.2	chr15	-	2326	6	full-splice_match	LRRC57	ENST00000397130.7	2384	6	-12	70	8	-68	multi-exon	FALSE	canonical	1	110976	junction_5	40107.94546420946	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	116	835	45.0	0	True	AATAAA	-20
PB.3809.1	chr15	-	2502	7	novel_not_in_catalog	AC018362.3	novel	2549	9	NA	NA	16	-40436	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	75150.27517082023	NA	0	NA	TRUE	NA	NA	NA	A	coding	239	720	101	820	35.0	15	True	NA	NA
PB.10449.9	chr7	-	1751	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	268032	junction_1	4632153.950811027	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	172	1197	25.0	-3	True	AATAAA	-22
PB.3914.3	chr15	-	4417	25	incomplete-splice_match	HERC1	ENST00000443617.6	15137	78	184047	2	-12291	-2	5prime_fragment	FALSE	canonical	1	187663	junction_18	54265.227644704464	NA	0	NA	TRUE	NA	NA	NA	B	coding	1307	3924	33	3956	10.0	NA	False	AATAAA	-17
PB.12080.1	chrX	-	2234	2	full-splice_match	USP27X-AS1	ENST00000437322.2	2175	2	-58	-1	-58	1	multi-exon	FALSE	canonical	1	5827	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	116	351	231	581	40.0	NA	False	NA	NA
PB.597.10	chr1	+	1628	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	0	25546	0	-25546	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	111	1175	35.0	-24	True	ATTAAA	-21
PB.610.6	chr1	-	1770	9	full-splice_match	DRAM2	ENST00000484310.5	1872	9	102	0	-6	0	multi-exon	FALSE	canonical	1	72731	junction_8	246760.4143321197	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	143	943	30.0	-12	True	AATAAA	-13
PB.10449.1	chr7	-	4007	10	incomplete-splice_match	HNRNPA2B1	ENST00000608362.2	3497	11	555	16647	0	223	3prime_fragment	FALSE	canonical	1	6843184	junction_9	3088624.0211955947	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	30.0	-1	True	AGTAAA	-22
PB.10449.2	chr7	-	3783	10	incomplete-splice_match	HNRNPA2B1	ENST00000608362.2	3497	11	555	16871	0	-1	3prime_fragment	FALSE	canonical	1	6843184	junction_9	3088624.0211955947	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	170	1195	25.0	-1	True	AATAAA	-22
PB.10449.3	chr7	-	3625	11	full-splice_match	HNRNPA2B1	ENST00000356674.7	1711	11	2	-1916	2	-1	multi-exon	FALSE	canonical	1	6843184	junction_10	2936723.3636205094	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	168	1193	25.0	1	True	AATAAA	-22
PB.10449.4	chr7	-	3289	12	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1172921	junction_1	5497539.9570136005	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	172	1233	25.0	-3	True	AATAAA	-22
PB.10449.5	chr7	-	3254	11	novel_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1172921	junction_1	4425233.435110509	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	173	1198	25.0	-4	True	AATAAA	-22
PB.10449.6	chr7	-	3221	11	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	5	-1	intron_retention	FALSE	canonical	1	183033	junction_1	4651931.674930968	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	203	1228	25.0	-5	True	AATAAA	-22
PB.10554.3	chr7	+	1875	8	full-splice_match	NIPSNAP2	ENST00000446778.5	1882	8	6	1	6	-1	multi-exon	FALSE	canonical	1	14664	junction_2	386683.3599332473	NA	3	NA	TRUE	NA	NA	NA	C	coding	247	744	24	767	15.0	2	True	AATAAA	-20
PB.10554.2	chr7	+	1251	10	full-splice_match	NIPSNAP2	ENST00000322090.7	1999	10	-10	758	-10	119	multi-exon	FALSE	canonical	1	208935	junction_1	210399.31063686765	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	40	900	85.0	-395	False	NA	NA
PB.10554.1	chr7	+	1920	10	full-splice_match	NIPSNAP2	ENST00000322090.7	1999	10	8	71	-6	-68	multi-exon	FALSE	canonical	1	208935	junction_1	210399.31063686765	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	22	882	40.0	4	True	AATAAA	-17
PB.10554.5	chr7	+	2096	10	novel_in_catalog	NIPSNAP2	novel	662	7	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	1	10108	junction_1	267862.8999403784	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	549	989	15.0	-35	False	AATAAA	-19
PB.10554.4	chr7	+	2118	11	novel_in_catalog	NIPSNAP2	novel	662	7	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	1	2193	junction_3	357888.3309362852	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	567	1007	10.0	3	True	AATAAA	-23
PB.1018.4	chr1	-	7993	18	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	14	17373	14	-17369	3prime_fragment	FALSE	canonical	1	114304	junction_1	21982.60768462006	NA	0	NA	TRUE	NA	NA	NA	C	coding	2583	7749	244	7992	65.0	8629	False	NA	NA
PB.302.2	chr1	-	4088	18	novel_not_in_catalog	INPP5B	novel	3905	18	NA	NA	-14	0	intron_retention	FALSE	canonical	1	18806	junction_9	53493.67728107597	NA	3	NA	TRUE	NA	NA	NA	C	coding	372	1119	1352	2470	10.0	-25	False	GATAAA	-17
PB.7126.12	chr20	-	1419	8	full-splice_match	TBC1D20	ENST00000354200.4	4466	8	41	3006	19	-2203	multi-exon	FALSE	canonical	1	147269	junction_7	85831.24047091193	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	108	1319	20.0	3	True	ATTAAA	-14
PB.7126.11	chr20	-	2145	8	full-splice_match	TBC1D20	ENST00000354200.4	4466	8	22	2299	0	-1496	multi-exon	FALSE	canonical	1	147269	junction_7	85831.24047091193	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	127	1338	55.0	-16	True	TTTAAA	-22
PB.7126.10	chr20	-	2496	8	novel_in_catalog	TBC1D20	novel	5195	3	NA	NA	5	-3	no_combination_of_known_junctions	FALSE	canonical	1	10987	junction_7	145680.86811049888	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	122	1147	20.0	-11	True	AATAAA	-18
PB.11627.6	chr9	-	4327	25	novel_in_catalog	AGTPBP1	novel	4208	26	NA	NA	-64	0	no_combination_of_known_junctions	FALSE	canonical	1	1804	junction_19	77694.80754261081	NA	0	NA	TRUE	NA	NA	NA	C	coding	1182	3549	212	3760	15.0	-27	True	AATAAA	-17
PB.5596.1	chr19	-	1364	3	full-splice_match	SLC39A3	ENST00000269740.8	1502	3	135	3	0	-3	multi-exon	FALSE	canonical	1	348040	junction_2	107021.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	196	1140	25.0	-1	True	TTTAAA	-29
PB.5596.2	chr19	-	1284	3	full-splice_match	SLC39A3	ENST00000589363.5	524	3	1	-761	1	-3	multi-exon	FALSE	canonical	1	6998	junction_2	277542.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	116	1060	25.0	0	True	TTTAAA	-29
PB.5596.3	chr19	-	2928	2	full-splice_match	SLC39A3	ENST00000455372.2	2940	2	9	3	-2	-3	multi-exon	FALSE	canonical	1	348040	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	198	515	20.0	-3	True	NA	NA
PB.11403.4	chr8	+	3187	18	full-splice_match	KIFC2	ENST00000645548.1	3566	18	294	85	-15	2	multi-exon	FALSE	canonical	1	105875	junction_1	122823.74026342618	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	84	2459	10.0	0	True	AATAAA	-17
PB.11627.1	chr9	-	4423	25	novel_in_catalog	AGTPBP1	novel	4208	26	NA	NA	51	3	no_combination_of_known_junctions	TRUE	canonical	1	556	junction_22	78159.38524508038	NA	13	3	TRUE	NA	NA	NA	C	coding	1175	3528	323	3850	20.0	-53	True	AATAAA	-23
PB.7179.12	chr20	-	2825	1	genic	FLRT3	novel	NA	NA	NA	NA	-15	-5885	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	AATAGA	-38
PB.3085.1	chr13	+	2472	1	antisense	novelGene_KATNAL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.11215.1	chr8	-	3086	2	full-splice_match	C8orf59	ENST00000523245.1	799	2	33	-2320	3	-6	multi-exon	FALSE	canonical	1	1112798	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-8	True	AATAAA	-27
PB.7497.8	chr21	+	2064	11	full-splice_match	IFNAR1	ENST00000270139.7	6139	11	66	4009	-3	-4009	multi-exon	FALSE	canonical	1	231590	junction_1	79756.91144120363	NA	1	1	TRUE	NA	NA	NA	C	coding	488	1467	294	1760	60.0	-3	True	NA	NA
PB.12135.3	chrX	+	4223	22	full-splice_match	OGT	ENST00000373719.7	5461	22	-10	1248	-10	-6	multi-exon	FALSE	canonical	1	275340	junction_4	322124.1795623632	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3141	228	3368	15.0	-2	True	AATATA	-14
PB.7497.6	chr21	+	2319	12	novel_not_in_catalog	IFNAR1	novel	250	2	NA	NA	-4	2098	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	141185.3573468475	NA	2	1	TRUE	NA	NA	NA	C	coding	488	1467	295	1761	35.0	-4	True	NA	NA
PB.5758.1	chr19	+	1829	1	full-splice_match	JUNB	ENST00000302754.5	1820	1	-11	2	-11	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	347	1044	288	1331	10.0	-1	True	AGTAAA	-21
PB.7497.4	chr21	+	1233	8	incomplete-splice_match	IFNAR1	ENST00000270139.7	6139	11	62	10319	-7	4266	3prime_fragment	FALSE	canonical	1	231590	junction_1	90178.98367521047	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	936	298	1233	45.0	-7	True	AAAACA	-15
PB.7497.5	chr21	+	2051	11	novel_not_in_catalog	IFNAR1	novel	250	2	NA	NA	-5	-4009	any annotated donor/acceptor	FALSE	canonical	1	10928	junction_10	143445.17612439953	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	296	1747	60.0	-5	True	NA	NA
PB.2469.2	chr12	+	4314	8	full-splice_match	ETV6	ENST00000396373.8	5989	8	17	1658	17	-1658	multi-exon	FALSE	canonical	1	159826	junction_2	41356.80048908375	NA	3	NA	TRUE	NA	NA	NA	C	coding	452	1359	258	1616	35.0	15	True	NA	NA
PB.2469.3	chr12	+	3207	1	novel_in_catalog	ETV6	novel	5989	8	NA	NA	21532	24364	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-4495	False	NA	NA
PB.2469.1	chr12	+	2086	8	full-splice_match	ETV6	ENST00000396373.8	5989	8	119	3784	29	-3784	multi-exon	FALSE	canonical	1	159826	junction_2	41356.80048908375	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	156	1514	75.0	-2954	False	NA	NA
PB.8491.5	chr3	+	1690	10	novel_in_catalog	RSRC1	novel	1410	10	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	12779	junction_7	118784.4528950664	NA	1	1	TRUE	NA	NA	NA	C	coding	336	1011	124	1134	25.0	2	True	AATAAA	-20
PB.8491.4	chr3	+	2587	10	full-splice_match	RSRC1	ENST00000295930.7	1727	10	38	-898	1	3	multi-exon	FALSE	canonical	1	105561	junction_7	102835.11716779234	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	125	1129	20.0	1	True	AATAAA	-19
PB.8491.1	chr3	+	2576	10	novel_not_in_catalog	RSRC1	novel	1410	10	NA	NA	-21	-2	any annotated donor/acceptor	FALSE	canonical	1	5436	junction_1	123785.25481127125	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	119	1123	20.0	-11	True	AATAAA	-14
PB.8491.3	chr3	+	1652	10	full-splice_match	RSRC1	ENST00000611884.4	1738	10	37	49	0	-8	multi-exon	FALSE	canonical	1	104049	junction_1	107596.8533752122	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	138	1142	55.0	0	True	NA	NA
PB.7210.8	chr20	-	3502	14	novel_not_in_catalog	ACSS1	novel	3509	13	NA	NA	170	-2	any annotated donor/acceptor	FALSE	canonical	1	3722	junction_6	87306.49189042598	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	424	1974	5.0	372	False	AATAAA	-19
PB.7210.7	chr20	-	3533	13	novel_in_catalog	ACSS1	novel	3509	13	NA	NA	-8	-2	no_combination_of_known_junctions	FALSE	canonical	1	1497	junction_9	88382.0252114208	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	89	2005	5.0	194	False	AATAAA	-19
PB.7210.6	chr20	-	3639	14	full-splice_match	ACSS1	ENST00000323482.8	3680	14	39	2	39	-2	multi-exon	FALSE	canonical	1	191275	junction_9	57308.54958956099	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	42	2111	5.0	-5	True	AATAAA	-19
PB.7210.4	chr20	-	3078	10	novel_in_catalog	ACSS1	novel	3509	13	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	11313	junction_7	97919.65094320703	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	94	1548	5.0	189	False	AATAAA	-21
PB.7210.3	chr20	-	3496	13	novel_in_catalog	ACSS1	novel	3509	13	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	7365	junction_10	87378.67206252176	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	758	1966	5.0	-1	True	AATAAA	-21
PB.7210.2	chr20	-	3612	12	novel_in_catalog	ACSS1	novel	3509	13	NA	NA	39	0	intron_retention	FALSE	canonical	1	7365	junction_9	90144.27088875986	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	727	1617	5.0	-5	True	AATAAA	-21
PB.7210.1	chr20	-	3826	13	novel_in_catalog	ACSS1	novel	3509	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	191275	junction_8	59177.2636195693	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	80	1831	5.0	203	False	AATAAA	-21
PB.8330.5	chr3	-	2387	7	full-splice_match	RABL3	ENST00000483733.1	760	7	-17	-1610	0	492	multi-exon	FALSE	canonical	1	8241	junction_2	80947.49072375389	NA	2	1	TRUE	NA	NA	NA	C	coding	212	639	31	669	65.0	-1	True	TTTAAA	-38
PB.2161.2	chr11	-	2346	2	full-splice_match	LIPT2	ENST00000310109.4	1018	2	-6	-1322	-6	1191	multi-exon	FALSE	canonical	1	32134	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	37	732	35.0	-18	False	NA	NA
PB.2161.1	chr11	-	2394	2	full-splice_match	LIPT2	ENST00000527115.1	769	2	-413	-1212	5	1212	multi-exon	FALSE	canonical	1	1412	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	26	649	15.0	-7	True	NA	NA
PB.8330.6	chr3	-	1986	8	full-splice_match	RABL3	ENST00000273375.7	3883	8	4	1893	0	23	multi-exon	FALSE	canonical	1	183085	junction_2	20566.026893984206	NA	1	NA	TRUE	NA	NA	NA	C	coding	236	711	27	737	60.0	3	True	AATAAA	-24
PB.8330.1	chr3	-	2732	8	full-splice_match	RABL3	ENST00000273375.7	3883	8	16	1135	-1	781	multi-exon	FALSE	canonical	1	183085	junction_2	20566.026893984206	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	15	725	80.0	-6	True	NA	NA
PB.7965.6	chr3	-	1611	3	full-splice_match	DPH3	ENST00000488423.1	3131	3	-2	1522	-2	410	multi-exon	FALSE	canonical	1	205167	junction_2	10595.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	82	249	99	347	15.0	18	False	AATAAA	-17
PB.8330.3	chr3	-	2570	8	full-splice_match	RABL3	ENST00000273375.7	3883	8	17	1296	0	620	multi-exon	FALSE	canonical	1	183085	junction_2	20566.026893984206	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	14	724	65.0	-5	True	NA	NA
PB.8330.2	chr3	-	2674	7	full-splice_match	RABL3	ENST00000483733.1	760	7	-15	-1899	-2	781	multi-exon	FALSE	canonical	1	8241	junction_2	80947.49072375389	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	29	667	80.0	1	True	NA	NA
PB.12135.5	chrX	+	6665	21	novel_in_catalog	OGT	novel	5461	22	NA	NA	-7	7	intron_retention	FALSE	canonical	1	775434	junction_3	261028.86251923846	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	3874	6636	20.0	1	True	AATAAA	-25
PB.3218.93	chr13	-	2326	2	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	-10751	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	coding	147	444	428	871	100.0	-1	True	NA	NA
PB.3218.92	chr13	-	2612	4	novel_in_catalog	DCT	novel	5064	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1660	junction_2	117316.71749868672	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	427	1140	75.0	0	True	NA	NA
PB.3218.91	chr13	-	2948	3	full-splice_match	DCT	ENST00000472871.1	3540	3	592	0	592	0	multi-exon	FALSE	canonical	1	236645	junction_2	12879.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	3	536	75.0	-15	True	NA	NA
PB.3218.90	chr13	-	1362	4	incomplete-splice_match	DCT	ENST00000446125.1	2395	10	104	25868	91	0	3prime_fragment	FALSE	canonical	1	137731	junction_2	53738.93933328668	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	324	1190	75.0	4	True	NA	NA
PB.11285.5	chr8	+	2152	13	full-splice_match	ATP6V1C1	ENST00000518738.1	2130	13	-23	1	-9	-1	multi-exon	FALSE	canonical	1	368963	junction_10	96598.57796870712	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	187	1335	15.0	-4	True	AATAAA	-16
PB.4249.1	chr16	-	2637	4	full-splice_match	LITAF	ENST00000622633.4	2467	4	31	-201	0	197	multi-exon	FALSE	canonical	1	576206	junction_3	400020.3360055586	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	40	525	35.0	-1	True	TTTAAA	-19
PB.4249.2	chr16	-	2434	4	full-splice_match	LITAF	ENST00000622633.4	2467	4	28	5	-3	-5	multi-exon	FALSE	canonical	1	576206	junction_3	400020.3360055586	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	43	528	40.0	-4	True	AATAAA	-7
PB.4249.3	chr16	-	2347	4	full-splice_match	LITAF	ENST00000339430.9	2356	4	20	-11	20	10	multi-exon	FALSE	canonical	1	4747	junction_3	647582.5492317992	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	214	699	20.0	1112	False	AATAAA	-30
PB.8320.7	chr3	-	2887	7	full-splice_match	CD80	ENST00000264246.7	2725	7	67	-229	21	229	multi-exon	FALSE	canonical	1	50720	junction_1	16636.31122641742	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	297	1163	25.0	2	True	AATATA	-22
PB.8320.4	chr3	-	4316	7	novel_not_in_catalog	CD80	novel	2725	7	NA	NA	621	1281	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	32472.28524663592	NA	5	NA	TRUE	NA	NA	NA	C	coding	288	867	674	1540	20.0	3717	False	ATTAAA	-18
PB.8760.9	chr4	-	7942	35	novel_not_in_catalog	ATP8A1	novel	5918	14	NA	NA	-11752	-1	any annotated donor/acceptor	FALSE	canonical	1	791	junction_34	56989.1075255359	NA	3	NA	TRUE	NA	NA	NA	C	coding	970	2913	492	3404	35.0	592	False	AATAAA	-14
PB.4249.8	chr16	-	1730	4	full-splice_match	LITAF	ENST00000339430.9	2356	4	23	603	23	0	multi-exon	FALSE	canonical	1	4747	junction_3	647582.5492317992	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	211	696	95.0	1115	False	NA	NA
PB.4249.9	chr16	-	1676	4	full-splice_match	LITAF	ENST00000571688.5	2632	4	75	881	75	0	multi-exon	FALSE	canonical	1	17908	junction_3	641683.276911766	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	157	642	95.0	-23	False	NA	NA
PB.8320.1	chr3	-	9093	7	full-splice_match	CD80	ENST00000264246.7	2725	7	-71	-6297	-71	6297	multi-exon	TRUE	canonical	1	50720	junction_1	16636.31122641742	NA	6	NA	TRUE	NA	NA	NA	C	coding	288	867	435	1301	85.0	1	True	NA	NA
PB.11881.13	chr9	-	1559	6	full-splice_match	SURF4	ENST00000371989.7	2984	6	2	1423	2	-4	multi-exon	FALSE	canonical	1	1350008	junction_5	313106.1478080557	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	129	938	30.0	1	True	ATTAAA	-44
PB.3709.1	chr14	+	1684	8	full-splice_match	TEDC1	ENST00000392522.7	1630	8	7	-61	1	0	multi-exon	FALSE	canonical	1	101652	junction_5	36254.750029113005	NA	0	NA	TRUE	NA	NA	NA	A	coding	426	1281	121	1401	5.0	-9	True	AATAAA	-20
PB.5570.1	chr19	+	510	4	full-splice_match	RPS15	ENST00000592588.6	510	4	-1	1	0	-1	multi-exon	FALSE	canonical	1	632225	junction_3	1478533.1930101835	NA	0	NA	TRUE	NA	NA	NA	A	coding	145	438	42	479	10.0	-12	True	AATAAA	-16
PB.9970.4	chr6	+	2948	5	novel_in_catalog	ZFAND3	novel	3366	6	NA	NA	-52	-3	no_combination_of_known_junctions	FALSE	canonical	1	17261	junction_4	244948.1202973142	NA	2	NA	TRUE	NA	NA	NA	C	coding	171	516	201	716	15.0	-49	True	ATTAAA	-12
PB.9970.5	chr6	+	3180	7	novel_in_catalog	ZFAND3	novel	3366	6	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	1	458	junction_3	350883.5185765594	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	172	948	15.0	-20	True	ATTAAA	-12
PB.12287.4	chrX	-	3627	5	novel_not_in_catalog	MMGT1	novel	3738	4	NA	NA	34	0	any annotated donor/acceptor	FALSE	canonical	1	1775	junction_4	93717.41772577551	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	83	673	5.0	7249	False	AATAAA	-23
PB.12287.5	chrX	-	3110	1	incomplete-splice_match	MMGT1	ENST00000305963.2	3738	4	8880	4	8880	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	9665	False	AATAAA	-19
PB.12287.3	chrX	-	3824	4	full-splice_match	MMGT1	ENST00000305963.2	3738	4	-88	2	-88	-2	multi-exon	FALSE	canonical	1	197996	junction_3	19558.014333430343	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	477	872	5.0	7127	False	AATAAA	-21
PB.9970.2	chr6	+	3065	5	full-splice_match	ZFAND3	ENST00000373391.6	3001	5	-67	3	-67	-3	multi-exon	TRUE	canonical	1	57587	junction_3	272816.1204259198	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	216	833	15.0	-64	True	ATTAAA	-12
PB.9970.3	chr6	+	2989	6	full-splice_match	ZFAND3	ENST00000287218.8	3366	6	235	142	-64	-142	multi-exon	FALSE	canonical	1	324104	junction_1	191807.57463812528	NA	3	NA	TRUE	NA	NA	NA	C	coding	227	684	213	896	20.0	-61	True	TTTAAA	-17
PB.8598.1	chr3	+	4672	12	full-splice_match	IL1RAP	ENST00000447382.5	4769	12	97	0	37	0	multi-exon	FALSE	canonical	1	53958	junction_1	38325.99627682978	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	153	1865	20.0	47	False	AATAAA	-20
PB.8598.3	chr3	+	3216	10	novel_not_in_catalog	IL1RAP	novel	4697	11	NA	NA	-4	5931	any annotated donor/acceptor	FALSE	canonical	1	992	junction_9	55576.31219823384	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	355	1419	30.0	-62	False	NA	NA
PB.8598.2	chr3	+	3089	9	novel_not_in_catalog	IL1RAP	novel	4697	11	NA	NA	-1	5930	any annotated donor/acceptor	FALSE	canonical	1	992	junction_8	56166.449540072404	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	136	1293	35.0	-4	True	NA	NA
PB.8598.5	chr3	+	3803	11	full-splice_match	IL1RAP	ENST00000072516.7	4697	11	0	894	0	-887	multi-exon	FALSE	canonical	1	58989	junction_1	35513.3139316792	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	171	1883	30.0	-58	False	AATAAA	-13
PB.8598.4	chr3	+	4942	13	full-splice_match	IL1RAP	ENST00000439062.5	2244	13	-9	-2689	-1	0	multi-exon	FALSE	canonical	1	2443	junction_1	55515.699130153465	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	423	2135	20.0	-59	False	AATAAA	-20
PB.8598.7	chr3	+	1995	8	full-splice_match	IL1RAP	ENST00000422940.5	1957	8	-42	4	1	-4	multi-exon	FALSE	canonical	1	58989	junction_1	37321.46175254847	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	162	1232	40.0	2	True	AATAAA	-39
PB.8598.6	chr3	+	2097	9	full-splice_match	IL1RAP	ENST00000422485.5	2048	9	-47	-2	0	2	multi-exon	FALSE	canonical	1	53958	junction_1	41897.723453779385	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	351	1328	30.0	-58	False	AATAAA	-45
PB.5783.4	chr19	-	1563	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	902151	junction_6	317935.7321873497	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	77	1054	20.0	-1	True	AATAAA	-14
PB.5783.5	chr19	-	1473	11	full-splice_match	DDX39A	ENST00000242776.8	1471	11	28	-30	-2	-2	multi-exon	FALSE	canonical	1	902151	junction_7	302412.5106754679	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	75	1358	20.0	1	True	AATAAA	-14
PB.5783.6	chr19	-	2988	6	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1221387	junction_5	309230.51440244383	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	77	562	20.0	-1	True	AATAAA	-14
PB.5783.7	chr19	-	2806	8	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	1221387	junction_7	269505.03910407645	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	2143	2691	20.0	-3	True	AATAAA	-14
PB.5783.1	chr19	-	2488	9	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	15	intron_retention	FALSE	canonical	1	902151	junction_5	337647.0059636987	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	77	730	15.0	-1	True	AATAAA	-31
PB.5783.2	chr19	-	1921	11	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	5	intron_retention	FALSE	canonical	1	54150	junction_5	638891.1030253904	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	116	742	15.0	-1	True	AATAAA	-21
PB.12306.1	chrX	+	2835	6	novel_not_in_catalog	LINC00894	novel	3414	15	NA	NA	120	6	intron_retention	FALSE	canonical	1	3470	junction_2	7787.1665861210395	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	7479	False	AATAAA	-25
PB.4040.1	chr15	-	1444	4	full-splice_match	C15orf40	ENST00000304177.9	11244	4	-20	9820	4	43	multi-exon	FALSE	canonical	1	170448	junction_1	39243.6120746634	NA	1	NA	TRUE	NA	NA	NA	A	coding	153	462	29	490	35.0	-44	True	ATTAAA	-18
PB.11343.11	chr8	-	1807	11	novel_in_catalog	FAM49B	novel	3798	12	NA	NA	2	-3	intron_retention	FALSE	canonical	1	105891	junction_9	343285.4382516247	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	602	1138	15.0	6	True	AATAAA	-19
PB.5783.8	chr19	-	2422	9	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	1	-2	intron_retention	FALSE	canonical	1	77837	junction_4	696431.9919867333	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	76	561	20.0	0	True	AATAAA	-14
PB.5783.9	chr19	-	2419	9	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	124770	junction_5	543688.7557053984	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	1756	2304	20.0	1	True	AATAAA	-14
PB.5546.3	chr19	-	1699	9	full-splice_match	RNF126	ENST00000605891.5	1671	9	-36	8	3	-4	multi-exon	FALSE	canonical	1	17446	junction_6	231422.51710440256	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	698	1105	30.0	-47	True	AATACA	-9
PB.5546.2	chr19	-	1689	9	novel_not_in_catalog	RNF126	novel	1671	9	NA	NA	-9	-4	any annotated donor/acceptor	TRUE	canonical	1	38381	junction_3	215422.31044621253	NA	3	NA	TRUE	NA	NA	NA	C	coding	248	747	83	829	30.0	-20	True	AATACA	-9
PB.5546.1	chr19	-	2326	8	novel_in_catalog	RNF126	novel	1671	9	NA	NA	19	-4	intron_retention	FALSE	canonical	1	205505	junction_4	171571.10740400534	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	94	975	30.0	-31	True	AATACA	-9
PB.3715.1	chr14	-	1400	2	intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1181	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	95	288	93	380	5.0	NA	False	AATAAA	-18
PB.5546.4	chr19	-	1626	9	full-splice_match	RNF126	ENST00000292363.9	1694	9	60	8	16	-4	multi-exon	FALSE	canonical	1	205505	junction_5	169672.13640264422	NA	1	1	TRUE	NA	NA	NA	C	coding	311	936	97	1032	30.0	-34	True	AATACA	-9
PB.956.1	chr1	+	5948	3	incomplete-splice_match	RASAL2	ENST00000462775.5	14453	16	124572	5293	9568	-5293	5prime_fragment	FALSE	canonical	1	104684	junction_2	11160.5	NA	3	NA	TRUE	NA	NA	NA	A	coding	90	273	61	333	40.0	NA	False	AATAAA	-20
PB.591.11	chr1	-	2762	20	full-splice_match	SORT1	ENST00000256637.7	7028	20	33	4233	33	-2	multi-exon	FALSE	canonical	1	217162	junction_19	79487.46845688451	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	27	2522	5.0	-1	True	AAAAAG	-28
PB.591.10	chr1	-	3319	20	full-splice_match	SORT1	ENST00000256637.7	7028	20	33	3676	33	555	multi-exon	FALSE	canonical	1	217162	junction_19	79487.46845688451	NA	1	1	TRUE	NA	NA	NA	C	coding	831	2496	27	2522	15.0	-1	True	ATTAAA	-24
PB.591.12	chr1	-	2625	20	full-splice_match	SORT1	ENST00000256637.7	7028	20	34	4369	34	-138	multi-exon	FALSE	canonical	1	217162	junction_19	79487.46845688451	NA	1	1	TRUE	NA	NA	NA	C	coding	831	2496	26	2521	5.0	0	True	AATAAA	-21
PB.2880.5	chr12	-	8552	15	full-splice_match	SSH1	ENST00000326495.9	13040	15	-20	4508	-20	2097	multi-exon	TRUE	canonical	1	82225	junction_14	33281.187467546886	NA	2	NA	TRUE	NA	NA	NA	C	coding	1049	3150	115	3264	30.0	-5	True	AATAAA	-13
PB.2880.6	chr12	-	8508	14	novel_in_catalog	SSH1	novel	13040	15	NA	NA	-23	2097	combination_of_known_junctions	FALSE	canonical	1	34737	junction_4	45046.03334972324	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	1253	3220	30.0	-8	True	AATAAA	-13
PB.6564.2	chr2	+	1179	10	full-splice_match	WDR54	ENST00000480089.5	1046	10	-29	-104	0	0	multi-exon	FALSE	canonical	1	19838	junction_1	165728.82707276242	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	122	1126	20.0	0	True	CATAAA	-16
PB.2880.9	chr12	-	2584	13	full-splice_match	SSH1	ENST00000326470.9	2432	13	-147	-5	-147	-2	multi-exon	FALSE	canonical	1	1720	junction_12	46824.89468480475	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	294	2405	30.0	-300	False	ATTAAA	-24
PB.2880.8	chr12	-	4683	15	full-splice_match	SSH1	ENST00000326495.9	13040	15	-22	8379	-22	-1774	multi-exon	FALSE	canonical	1	82225	junction_14	33281.187467546886	NA	1	NA	TRUE	NA	NA	NA	C	coding	1049	3150	117	3266	70.0	-7	True	NA	NA
PB.7901.5	chr3	+	5282	28	full-splice_match	CHL1	ENST00000256509.6	8023	28	167	2574	-8	-9	multi-exon	FALSE	canonical	1	19904	junction_1	22098.337973057332	NA	1	NA	TRUE	NA	NA	NA	C	coding	1224	3675	476	4150	40.0	0	True	AATAAA	-9
PB.2890.8	chr12	-	5551	20	novel_in_catalog	GIT2	novel	5466	20	NA	NA	1	-1	intron_retention	FALSE	canonical	1	10983	junction_6	122462.02964838165	NA	1	NA	TRUE	NA	NA	NA	C	coding	744	2235	144	2378	10.0	0	True	AATAAA	-15
PB.2890.9	chr12	-	2811	20	full-splice_match	GIT2	ENST00000355312.7	5466	20	-145	2800	-1	23	multi-exon	FALSE	canonical	1	113740	junction_5	109094.67351099646	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	146	2425	65.0	-2	True	TATAAA	-41
PB.2890.6	chr12	-	5610	20	full-splice_match	GIT2	ENST00000355312.7	5466	20	-147	3	2	-3	multi-exon	FALSE	canonical	1	113740	junction_5	109094.67351099646	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	148	2427	20.0	-4	True	AATAAA	-25
PB.2890.4	chr12	-	5118	17	novel_in_catalog	GIT2	novel	5466	20	NA	NA	1	-2	intron_retention	FALSE	canonical	1	8129	junction_4	119149.14919858259	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	144	1934	25.0	0	True	AATAAA	-26
PB.2890.2	chr12	-	5457	19	novel_in_catalog	GIT2	novel	5466	20	NA	NA	1	-2	intron_retention	FALSE	canonical	1	45557	junction_6	121629.55673400986	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	144	2273	25.0	0	True	AATAAA	-26
PB.2890.3	chr12	-	5269	18	novel_in_catalog	GIT2	novel	5466	20	NA	NA	0	-2	intron_retention	FALSE	canonical	1	3652	junction_4	116287.19541872588	NA	2	1	TRUE	NA	NA	NA	C	coding	646	1941	145	2085	25.0	-1	True	AATAAA	-26
PB.2890.1	chr12	-	5518	19	full-splice_match	GIT2	ENST00000361006.9	5444	19	-64	-10	0	-2	multi-exon	FALSE	canonical	1	62189	junction_4	111103.28214836359	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	145	2334	25.0	-1	True	AATAAA	-26
PB.2238.21	chr11	-	3410	16	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	-7	-6	no_combination_of_known_junctions	FALSE	canonical	1	28052	junction_14	138399.09340830235	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	500	2215	30.0	-8	True	ATTAAA	-21
PB.2238.20	chr11	-	3156	14	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	9	-4	no_combination_of_known_junctions	FALSE	canonical	1	1556	junction_13	115625.3454518684	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	244	1959	20.0	19	True	ATTAAA	-23
PB.2238.22	chr11	-	3329	16	novel_not_in_catalog	MTMR2	novel	4681	15	NA	NA	2308	-7	any annotated donor/acceptor	FALSE	canonical	1	2424	junction_15	150102.5689917694	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	420	2135	25.0	1	True	ATTAAA	-20
PB.2238.25	chr11	-	3504	16	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	2	-12	combination_of_known_junctions	FALSE	canonical	1	1898	junction_12	134418.83171550033	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	732	2315	20.0	1	True	ATTAAA	-15
PB.2238.24	chr11	-	3176	14	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	0	-10	no_combination_of_known_junctions	FALSE	canonical	1	6805	junction_3	129271.71238640575	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	147	1985	15.0	6	True	ATTAAA	-17
PB.2238.27	chr11	-	2715	16	full-splice_match	MTMR2	ENST00000352297.11	3350	16	-7	642	0	605	multi-exon	FALSE	canonical	1	112648	junction_15	107291.31383597132	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	441	2156	20.0	-1	True	AGTAAA	-21
PB.2238.29	chr11	-	2541	17	novel_in_catalog	MTMR2	novel	4681	15	NA	NA	1	348	no_combination_of_known_junctions	FALSE	canonical	1	1780	junction_14	148469.11000645682	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	449	2239	25.0	0	True	ATTAAA	-19
PB.2238.28	chr11	-	2637	15	full-splice_match	MTMR2	ENST00000346299.9	4681	15	195	1849	0	605	multi-exon	FALSE	canonical	1	101789	junction_14	97265.74303026525	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	147	2078	20.0	6	True	AGTAAA	-21
PB.673.1	chr1	-	2308	10	novel_in_catalog	PDZK1	novel	1897	7	NA	NA	-90	-8	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	519	1560	308	1867	35.0	5	True	AATAAA	-8
PB.12047.12	chrX	+	2745	20	incomplete-splice_match	UBA1	ENST00000335972.10	3559	26	7477	1	-1374	1	5prime_fragment	FALSE	canonical	1	2024313	junction_7	479642.2982348813	NA	6	1	TRUE	NA	NA	NA	C	coding	839	2520	28	2547	10.0	-9833	False	AATAAA	-16
PB.12047.10	chrX	+	2947	22	novel_not_in_catalog	UBA1	novel	3466	26	NA	NA	-3	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	773172.4102053166	NA	2	1	TRUE	NA	NA	NA	C	coding	853	2562	188	2749	10.0	5	True	AATAAA	-16
PB.7189.3	chr20	+	2238	4	novel_in_catalog	ZNF133	novel	2245	2	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	12005	junction_1	35187.34030238085	NA	1	1	TRUE	NA	NA	NA	C	coding	654	1965	97	2061	10.0	-12	True	AATAAA	-22
PB.1781.14	chr11	+	2888	6	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	571947	junction_1	198865.14408955633	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	597	2292	2888	35.0	-52	True	AATAAA	-25
PB.6678.11	chr2	+	4041	17	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	665	21638	3	-2375	3prime_fragment	FALSE	canonical	1	157152	junction_1	32981.97529333257	NA	0	NA	TRUE	NA	NA	NA	C	coding	1330	3990	50	4039	75.0	4	True	NA	NA
PB.7104.1	chr2	+	2619	12	full-splice_match	CAPN10	ENST00000391984.6	2644	12	18	7	0	-1	multi-exon	FALSE	canonical	1	85209	junction_7	47591.21352494449	NA	1	NA	TRUE	NA	NA	NA	A	coding	672	2019	179	2197	20.0	0	True	AATAAA	-20
PB.1781.10	chr11	+	2701	7	full-splice_match	TRIM22	ENST00000454828.5	1002	7	-90	-1609	-31	-91	multi-exon	FALSE	canonical	1	19740	junction_2	354249.8807541554	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	177	1577	40.0	-67	True	AATAAA	-21
PB.1781.11	chr11	+	3513	7	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-30	-345	intron_retention	FALSE	canonical	1	571947	junction_1	199833.64934399532	NA	14	NA	TRUE	NA	NA	NA	C	coding	309	930	1714	2643	35.0	-66	True	ATTAAA	-13
PB.1781.12	chr11	+	2302	7	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	571947	junction_1	199833.64934399532	NA	3	NA	TRUE	NA	NA	NA	C	coding	199	597	1706	2302	35.0	-58	True	AATAAA	-25
PB.1781.13	chr11	+	2208	1	novel_in_catalog	TRIM22	novel	2989	8	NA	NA	-17	-5002	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-53	True	ACTAAA	-30
PB.972.4	chr1	+	6873	36	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-693	-7008	intron_retention	FALSE	non_canonical	0	0	junction_1	7014.022120388995	NA	0	NA	TRUE	NA	NA	NA	B	coding	1774	5325	1128	6452	30.0	-6	True	ATTAAA	-16
PB.972.5	chr1	+	7022	36	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-686	-6852	intron_retention	FALSE	non_canonical	0	0	junction_1	7014.022120388995	NA	0	NA	TRUE	NA	NA	NA	B	coding	1774	5325	1121	6445	25.0	1	True	NA	NA
PB.972.6	chr1	+	2454	8	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-684	3721	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	9632.368640820028	NA	1	NA	TRUE	NA	NA	NA	B	coding	358	1077	1119	2195	20.0	3	True	NA	NA
PB.972.7	chr1	+	6836	37	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-443	-6852	intron_retention	FALSE	non_canonical	0	0	junction_1	6890.548672528746	NA	1	NA	TRUE	NA	NA	NA	B	coding	1793	5382	878	6259	25.0	-55	True	NA	NA
PB.972.1	chr1	+	2225	4	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-737	-138887	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	9716.550965577584	NA	1	NA	TRUE	NA	NA	NA	B	coding	182	549	1172	1720	75.0	-973	False	NA	NA
PB.972.2	chr1	+	2501	4	novel_not_in_catalog	CACNA1E	novel	2198	12	NA	NA	-712	-138586	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	9716.550965577584	NA	1	NA	TRUE	NA	NA	NA	B	coding	182	549	1147	1695	20.0	-2	True	NA	NA
PB.7417.1	chr20	+	1523	1	genic	MHENCR	novel	NA	NA	NA	NA	-24	18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	131	396	121	516	40.0	-30	False	NA	NA
PB.5655.10	chr19	-	1830	18	novel_in_catalog	C3	novel	708	4	NA	NA	-6768	-11810	no_combination_of_known_junctions	FALSE	canonical	1	2389	junction_17	172351.26949755457	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	670	1575	5.0	249	False	NA	NA
PB.101.3	chr1	+	2107	8	novel_in_catalog	MIIP	novel	779	6	NA	NA	21	-3	intron_retention	FALSE	canonical	1	200977	junction_1	109661.62435661169	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	149	808	20.0	-14	True	AATAAA	-13
PB.10548.2	chr7	+	1563	9	full-splice_match	LANCL2	ENST00000254770.2	4353	9	574	2216	-89	-2	multi-exon	FALSE	canonical	1	138402	junction_1	52875.652856341876	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	17	1357	15.0	0	True	TATAAA	-19
PB.1507.10	chr10	-	4020	18	novel_in_catalog	WAPL	novel	3207	3	NA	NA	-13	-4	intron_retention	FALSE	canonical	1	1582	junction_17	119263.54947947385	NA	1	NA	TRUE	NA	NA	NA	C	coding	928	2787	705	3491	10.0	10	True	AATAAA	-17
PB.1507.11	chr10	-	2608	8	novel_in_catalog	WAPL	novel	6333	19	NA	NA	8	-300	intron_retention	FALSE	canonical	1	35419	junction_3	123807.04052991295	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2142	466	2607	70.0	-16	True	AAAAAG	-7
PB.1507.12	chr10	-	2741	9	incomplete-splice_match	WAPL	ENST00000618527.4	6152	20	-20	32097	-20	-301	intron_retention	FALSE	canonical	1	149587	junction_8	77205.8677513204	NA	1	NA	TRUE	NA	NA	NA	C	coding	765	2295	447	2741	75.0	3	True	AAAAAG	-6
PB.1507.13	chr10	-	2763	9	novel_not_in_catalog	WAPL	novel	6333	19	NA	NA	23	-301	intron_retention	FALSE	canonical	1	5319	junction_6	130518.43140913088	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2313	451	2763	75.0	-1	True	AAAAAG	-6
PB.1507.14	chr10	-	2718	9	novel_not_in_catalog	WAPL	novel	6333	19	NA	NA	-15	-301	intron_retention	FALSE	canonical	1	88211	junction_6	109354.26804542198	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2277	442	2718	75.0	8	True	AAAAAG	-6
PB.1507.15	chr10	-	2604	8	novel_in_catalog	WAPL	novel	6333	19	NA	NA	-2	-301	intron_retention	FALSE	canonical	1	3330	junction_5	137886.23677391978	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	429	1976	75.0	21	True	AAAAAG	-6
PB.1507.16	chr10	-	2582	8	novel_not_in_catalog	WAPL	novel	6333	19	NA	NA	15	-301	intron_retention	FALSE	canonical	1	35419	junction_3	131674.19200745574	NA	1	NA	TRUE	NA	NA	NA	C	coding	708	2124	459	2582	75.0	-9	True	AAAAAG	-6
PB.9695.1	chr6	+	1559	2	antisense	novelGene_SERPINB9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	2576	False	NA	NA
PB.1507.18	chr10	-	2058	4	incomplete-splice_match	WAPL	ENST00000298767.9	6333	19	14	61990	14	-30193	3prime_fragment	FALSE	canonical	1	149587	junction_3	91094.60405900377	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1599	460	2058	60.0	-10	True	AATAAA	-10
PB.1507.19	chr10	-	2028	4	novel_not_in_catalog	WAPL	novel	6333	19	NA	NA	-21	-30193	intron_retention	FALSE	canonical	1	88211	junction_1	77632.63479290709	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	448	2028	60.0	2	True	AATAAA	-10
PB.9028.1	chr4	+	3177	1	full-splice_match	MIR4453HG	ENST00000604157.1	3000	1	1	-178	1	178	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	136	411	2	412	15.0	-28	True	NA	NA
PB.715.6	chr1	-	3580	12	full-splice_match	OTUD7B	ENST00000581312.5	8872	12	31	5261	30	4218	multi-exon	FALSE	canonical	1	82215	junction_11	26174.131731239864	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	265	2796	10.0	-5	True	TTTAAA	-24
PB.7110.20	chr2	+	2035	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-3	-69	combination_of_known_junctions	FALSE	canonical	1	39000	junction_1	1079769.9434276167	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	330	1415	40.0	-55	True	AATAAA	-22
PB.467.2	chr1	-	4300	4	full-splice_match	GNG12	ENST00000370982.3	4404	4	29	75	-2	-75	multi-exon	FALSE	canonical	1	161296	junction_3	234357.46866319882	NA	8	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	361	False	ATTAAA	-17
PB.9013.4	chr4	-	4610	15	full-splice_match	ZNF827	ENST00000508784.5	7463	15	-265	3118	-265	-7	multi-exon	FALSE	canonical	1	31008	junction_2	29999.731310106286	NA	0	NA	TRUE	NA	NA	NA	C	coding	1081	3246	494	3739	90.0	-78	True	NA	NA
PB.11519.1	chr9	-	1253	10	full-splice_match	STOML2	ENST00000356493.9	1278	10	22	3	22	2	multi-exon	FALSE	canonical	1	956500	junction_9	456167.26669195574	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	42	1112	20.0	-10	True	AATAAA	-20
PB.7651.2	chr22	-	1767	3	novel_in_catalog	CHCHD10	novel	384	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	274579	junction_2	582651.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	2	466	5.0	29	True	ATTAAA	-18
PB.7651.3	chr22	-	2516	1	novel_in_catalog	CHCHD10	novel	1171	4	NA	NA	92	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	175	528	478	1005	5.0	-380	False	ATTAAA	-17
PB.7754.8	chr22	+	3054	13	novel_not_in_catalog	CYTH4	novel	652	6	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	1390	junction_11	68747.22794224546	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	57	1220	5.0	6	True	AATAAA	-18
PB.7651.1	chr22	-	2016	2	full-splice_match	CHCHD10	ENST00000523865.1	490	2	-1487	-39	-9	-1	multi-exon	FALSE	canonical	1	1439882	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	78	605	5.0	20	True	ATTAAA	-18
PB.9460.7	chr5	+	3698	24	novel_not_in_catalog	DDX46	novel	1584	12	NA	NA	1	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	220939.79461064402	NA	3	1	TRUE	NA	NA	NA	C	coding	625	1878	1489	3366	25.0	3	True	AATAAA	-14
PB.1195.6	chr1	+	2284	15	novel_in_catalog	GNPAT	novel	839	6	NA	NA	-1	-140	combination_of_known_junctions	FALSE	canonical	1	16601	junction_1	164394.93067586806	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	174	2033	45.0	-6	True	AATAAA	-20
PB.1195.5	chr1	+	2757	13	novel_not_in_catalog	GNPAT	novel	839	6	NA	NA	-1	-260	any annotated donor/acceptor	FALSE	canonical	1	3100	junction_12	153233.80135929812	NA	4	NA	TRUE	NA	NA	NA	C	coding	590	1773	174	1946	30.0	-6	True	AATAAA	-15
PB.1195.4	chr1	+	2385	16	full-splice_match	GNPAT	ENST00000366647.8	2643	16	78	180	72	-140	multi-exon	FALSE	canonical	1	306069	junction_2	113931.2393015288	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	92	2134	45.0	-63	False	AATAAA	-20
PB.7754.2	chr22	+	3602	12	novel_in_catalog	CYTH4	novel	652	6	NA	NA	-2	-2	intron_retention	TRUE	canonical	1	138407	junction_5	47615.457084042726	NA	4	NA	TRUE	NA	NA	NA	C	coding	336	1011	98	1108	15.0	-35	True	AATAAA	-12
PB.7754.3	chr22	+	3105	13	full-splice_match	CYTH4	ENST00000248901.10	3206	13	101	0	-3	0	multi-exon	FALSE	canonical	1	138407	junction_5	45820.67778822376	NA	3	NA	TRUE	NA	NA	NA	C	coding	394	1185	87	1271	5.0	-24	True	AATAAA	-18
PB.1195.9	chr1	+	2364	16	novel_in_catalog	GNPAT	novel	839	6	NA	NA	-2	-140	no_combination_of_known_junctions	FALSE	canonical	1	2836	junction_1	203078.0276136244	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	398	2113	45.0	2	True	AATAAA	-20
PB.1366.10	chr10	-	2129	19	incomplete-splice_match	CUL2	ENST00000374749.7	4208	21	19	5199	17	-3458	3prime_fragment	FALSE	canonical	1	75855	junction_18	104168.91042075324	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1938	192	2129	70.0	-15	True	ATTAAA	-17
PB.7754.6	chr22	+	4042	14	novel_in_catalog	CYTH4	novel	652	6	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	1	5817	junction_6	87060.32281512949	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	71	535	5.0	-8	True	AATAAA	-19
PB.7754.7	chr22	+	3631	13	novel_not_in_catalog	CYTH4	novel	652	6	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	675	junction_6	68978.93210183615	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	1102	1797	5.0	3	True	AATAAA	-18
PB.7754.4	chr22	+	3217	14	novel_in_catalog	CYTH4	novel	652	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	17127	junction_8	75831.58769694231	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	84	920	5.0	-21	True	AATAAA	-18
PB.7754.5	chr22	+	2408	8	incomplete-splice_match	CYTH4	ENST00000462927.5	3667	13	-37	10309	1	1737	intron_retention	FALSE	canonical	1	138407	junction_5	56942.62797244402	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	83	898	35.0	-20	True	AGTAAA	-17
PB.11777.3	chr9	+	2339	14	novel_not_in_catalog	RABGAP1	novel	3897	28	NA	NA	-9	-13392	any annotated donor/acceptor	FALSE	canonical	1	4291	junction_13	95240.83803817046	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	144	1955	80.0	-9401	False	TATAAA	-34
PB.467.1	chr1	-	4471	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1455	-73	any annotated donor/acceptor	FALSE	canonical	1	5665	junction_3	300572.1538011921	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-7	True	ATTAAA	-19
PB.7868.8	chr22	+	2051	2	full-splice_match	TRMU	ENST00000493556.2	591	2	31	-1491	4	1491	multi-exon	FALSE	canonical	1	205148	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-13	True	NA	NA
PB.7868.9	chr22	+	2042	10	novel_in_catalog	TRMU	novel	814	6	NA	NA	-4	0	intron_retention	FALSE	canonical	1	155709	junction_4	52098.04893126464	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	45	1070	25.0	-12	True	AATAAA	-14
PB.7868.4	chr22	+	4494	8	novel_in_catalog	TRMU	novel	814	6	NA	NA	3	0	intron_retention	FALSE	canonical	1	66415	junction_3	92702.98735472227	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	4168	4479	20.0	-14	True	AATAAA	-15
PB.7868.5	chr22	+	2653	8	incomplete-splice_match	TRMU	ENST00000453630.5	1775	10	294	-2	3	0	intron_retention	FALSE	canonical	1	66415	junction_3	93098.23269919942	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	539	910	20.0	-14	True	AATAAA	-16
PB.7868.6	chr22	+	4601	9	novel_in_catalog	TRMU	novel	814	6	NA	NA	4	0	intron_retention	FALSE	canonical	1	66415	junction_4	75678.22057525865	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	46	546	20.0	-13	True	AATAAA	-16
PB.7868.7	chr22	+	2759	9	incomplete-splice_match	TRMU	ENST00000457572.5	1882	11	295	-2	4	0	intron_retention	FALSE	canonical	1	66415	junction_4	75893.34411517504	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	46	546	20.0	-13	True	AATAAA	-16
PB.7868.1	chr22	+	3193	10	novel_in_catalog	TRMU	novel	814	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	66415	junction_4	72573.27364162187	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	75	575	20.0	-92	False	AATAAA	-15
PB.7868.2	chr22	+	4390	8	full-splice_match	TRMU	ENST00000645026.1	1376	8	0	-3014	0	-2	multi-exon	FALSE	canonical	1	155709	junction_4	57995.82972129311	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	52	1038	35.0	-19	True	AATAAA	-10
PB.7868.3	chr22	+	1650	11	full-splice_match	TRMU	ENST00000645190.1	1651	11	0	1	0	0	multi-exon	FALSE	canonical	1	155709	junction_4	50850.140124094054	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	52	1317	20.0	-19	True	AATAAA	-16
PB.10060.4	chr6	-	2232	6	novel_not_in_catalog	CGAS	novel	1917	6	NA	NA	-35	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	47506.12713324461	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	131	1699	20.0	16	False	AATAAA	-17
PB.6790.1	chr2	+	2270	1	antisense	novelGene_CYTIP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	6186	False	NA	NA
PB.10484.5	chr7	+	3234	13	novel_not_in_catalog	SEPT7	novel	509	4	NA	NA	-74	0	any annotated donor/acceptor	FALSE	canonical	1	1007	junction_11	501929.9426110389	NA	3	1	TRUE	NA	NA	NA	C	coding	343	1032	223	1254	30.0	-77	False	AATAAA	-15
PB.7726.1	chr22	+	4007	9	novel_not_in_catalog	FBXO7	novel	2195	9	NA	NA	29	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	623019.6519885905	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	299	1276	15.0	-22	True	ATTAAA	-14
PB.7726.3	chr22	+	1845	8	novel_in_catalog	FBXO7	novel	2195	9	NA	NA	-29	-2	no_combination_of_known_junctions	FALSE	canonical	1	24028	junction_7	654080.5522335946	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	18	1274	15.0	10	True	ATTAAA	-14
PB.7726.2	chr22	+	2250	9	full-splice_match	FBXO7	ENST00000266087.11	2195	9	140	-195	18	195	multi-exon	FALSE	canonical	1	361396	junction_1	429001.5799777869	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	188	1756	45.0	5	True	NA	NA
PB.7726.5	chr22	+	1803	8	full-splice_match	FBXO7	ENST00000420700.5	1900	8	95	2	-27	-2	multi-exon	FALSE	canonical	1	18664	junction_1	556858.7977975116	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	406	1506	15.0	-4302	False	ATTAAA	-14
PB.7726.4	chr22	+	1866	9	full-splice_match	FBXO7	ENST00000266087.11	2195	9	327	2	-12	-2	multi-exon	FALSE	canonical	1	361396	junction_1	429001.5799777869	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	1	1569	15.0	27	True	ATTAAA	-14
PB.7726.7	chr22	+	2092	9	full-splice_match	FBXO7	ENST00000397426.5	1888	9	-9	-195	-9	195	multi-exon	FALSE	canonical	1	343497	junction_1	434308.755309209	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	372	1598	45.0	-3825	False	NA	NA
PB.7726.6	chr22	+	1758	9	full-splice_match	FBXO7	ENST00000425028.5	1921	9	164	-1	-53	1	multi-exon	FALSE	canonical	1	88035	junction_1	511521.8602520662	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	358	1458	15.0	-14	True	ATTAAA	-17
PB.7726.9	chr22	+	1824	8	novel_in_catalog	FBXO7	novel	2195	9	NA	NA	25	-1	no_combination_of_known_junctions	FALSE	canonical	1	24028	junction_7	657330.600338263	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	338	1252	15.0	-22	True	ATTAAA	-15
PB.7726.8	chr22	+	1692	9	full-splice_match	FBXO7	ENST00000452138.3	1535	9	46	-203	26	-18	multi-exon	FALSE	canonical	1	64162	junction_1	518853.2658365465	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	80	1411	65.0	-21	True	NA	NA
PB.823.4	chr1	-	2162	4	novel_in_catalog	GLMP	novel	658	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	265221	junction_3	187491.5254873018	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	35	895	10.0	-8	True	AATAGA	-20
PB.6896.1	chr2	+	2683	21	novel_not_in_catalog	WDR75	novel	2701	21	NA	NA	5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	176301.48908879783	NA	22	3	TRUE	NA	NA	NA	C	coding	832	2499	56	2554	60.0	-36	False	AATAAA	-23
PB.4662.1	chr17	-	4994	6	full-splice_match	MNT	ENST00000174618.4	4996	6	-12	14	-12	-14	multi-exon	FALSE	canonical	1	65315	junction_5	41561.582681125125	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	419	2167	20.0	7214	False	AATAAA	-35
PB.8465.5	chr3	-	1976	4	novel_not_in_catalog	ANKUB1	novel	431	4	NA	NA	-2806	-119121	intron_retention	FALSE	non_canonical	0	0	junction_3	477806.11064484675	NA	1	NA	TRUE	NA	NA	NA	A	coding	140	423	295	717	25.0	-2	True	AATAAA	-12
PB.4662.2	chr17	-	3819	3	novel_in_catalog	MNT	novel	4996	6	NA	NA	13	-21	intron_retention	FALSE	canonical	1	2590	junction_2	87574.0	NA	8	1	TRUE	NA	NA	NA	C	coding	301	906	94	999	30.0	7268	False	AATAAA	-28
PB.8465.1	chr3	-	4097	2	full-splice_match	PFN2	ENST00000461868.1	613	2	-237	-3247	36	-3	multi-exon	FALSE	canonical	1	978047	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	110	333	322	654	25.0	619	False	AATAAA	-13
PB.8465.2	chr3	-	2366	3	full-splice_match	PFN2	ENST00000239940.11	2261	3	-109	4	-5	-4	multi-exon	FALSE	canonical	1	824977	junction_1	76535.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	140	423	363	785	25.0	578	False	AATAAA	-12
PB.10451.2	chr7	-	2111	13	full-splice_match	SKAP2	ENST00000345317.6	3998	13	267	1620	109	-1620	multi-exon	FALSE	canonical	1	251022	junction_1	40051.37102617574	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	48	1127	95.0	636	False	NA	NA
PB.6896.3	chr2	+	4335	21	full-splice_match	WDR75	ENST00000427960.5	4297	21	-28	-10	8	-3	multi-exon	FALSE	canonical	1	15021	junction_2	176222.5020589808	NA	2	NA	TRUE	NA	NA	NA	C	coding	608	1827	2364	4190	30.0	2	True	AATAAA	-39
PB.10451.1	chr7	-	3859	13	full-splice_match	SKAP2	ENST00000345317.6	3998	13	136	3	-20	-3	multi-exon	TRUE	canonical	1	251022	junction_1	40051.37102617574	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	179	1258	40.0	505	False	AATAAA	-21
PB.9416.8	chr5	+	4385	13	novel_not_in_catalog	CSNK1G3	novel	4635	13	NA	NA	-29	-307	any annotated donor/acceptor	FALSE	canonical	1	1660	junction_1	100120.8313184069	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	798	2048	85.0	3	True	AATGAA	-30
PB.7460.1	chr21	-	3344	2	novel_not_in_catalog	AF127936.1	novel	695	2	NA	NA	-152	2536	any annotated donor/acceptor	FALSE	canonical	1	4299	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-10	True	AATAAA	-8
PB.9416.1	chr5	+	2504	9	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	1	2655	junction_1	93998.59102592642	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	538	1446	25.0	-363	False	AATAAA	-28
PB.6137.2	chr19	+	2744	18	novel_not_in_catalog	ALDH16A1	novel	3153	17	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	5563	junction_2	99450.99703074024	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	302	2623	20.0	-46	True	AATAAA	-17
PB.6137.3	chr19	+	3077	17	full-splice_match	ALDH16A1	ENST00000293350.8	3153	17	77	-1	10	1	multi-exon	FALSE	canonical	1	179010	junction_5	60759.61767374261	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	87	2495	25.0	-27	True	AGTAAA	-35
PB.9416.7	chr5	+	2709	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	155	-1	combination_of_known_junctions	FALSE	canonical	1	65772	junction_1	66229.41761523267	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	404	1651	25.0	-32	False	AATAAA	-28
PB.6137.1	chr19	+	2638	17	full-splice_match	ALDH16A1	ENST00000293350.8	3153	17	55	460	-1	0	multi-exon	TRUE	canonical	1	179010	junction_5	60759.61767374261	NA	3	1	TRUE	NA	NA	NA	C	coding	802	2409	109	2517	20.0	-49	True	AATAAA	-17
PB.4430.6	chr16	+	4659	23	novel_not_in_catalog	RBL2	novel	838	6	NA	NA	31	-2	any annotated donor/acceptor	FALSE	canonical	1	37558	junction_22	175975.81161081404	NA	0	NA	TRUE	NA	NA	NA	C	coding	1139	3420	107	3526	15.0	-31	True	AATAAA	-13
PB.4430.7	chr16	+	5070	21	novel_in_catalog	RBL2	novel	838	6	NA	NA	31	-1	intron_retention	FALSE	canonical	1	257083	junction_1	156436.9195011523	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	107	2377	15.0	-31	True	AATAAA	-14
PB.4430.4	chr16	+	3558	22	full-splice_match	RBL2	ENST00000262133.10	4906	22	26	1322	26	-1321	multi-exon	FALSE	canonical	1	257083	junction_1	154564.68588375766	NA	0	NA	TRUE	NA	NA	NA	C	coding	1139	3420	112	3531	35.0	-36	True	ATTAAA	-8
PB.4430.5	chr16	+	2816	17	incomplete-splice_match	RBL2	ENST00000262133.10	4906	22	26	20725	26	667	3prime_fragment	FALSE	canonical	1	257083	junction_1	99691.69474434668	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2703	112	2814	30.0	-36	True	NA	NA
PB.4430.2	chr16	+	6536	20	novel_in_catalog	RBL2	novel	838	6	NA	NA	20	-1	intron_retention	FALSE	canonical	1	257083	junction_1	160361.63522455966	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	118	2007	15.0	-42	True	AATAAA	-14
PB.4430.3	chr16	+	4031	22	full-splice_match	RBL2	ENST00000262133.10	4906	22	267	608	267	-607	multi-exon	FALSE	canonical	1	257083	junction_1	154564.68588375766	NA	6	NA	TRUE	NA	NA	NA	C	coding	1082	3249	42	3290	35.0	0	True	ATTAAA	-19
PB.4430.1	chr16	+	4945	23	novel_not_in_catalog	RBL2	novel	838	6	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	3020	junction_13	202264.29584552575	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	138	2102	15.0	-1233	False	AATAAA	-14
PB.6896.8	chr2	+	2769	22	novel_not_in_catalog	WDR75	novel	2701	21	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	371	junction_3	197838.77561277951	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	814	2640	60.0	-1	True	AATAAA	-23
PB.10484.7	chr7	+	2468	14	novel_in_catalog	SEPT7	novel	509	4	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	1	9624	junction_5	515674.3821009832	NA	2	1	TRUE	NA	NA	NA	C	coding	289	870	588	1457	25.0	-33	False	AATAAA	-14
PB.4430.8	chr16	+	6430	20	novel_not_in_catalog	RBL2	novel	838	6	NA	NA	32	-2	intron_retention	FALSE	canonical	1	9584	junction_17	161336.08128884216	NA	4	NA	TRUE	NA	NA	NA	C	coding	629	1890	106	1995	15.0	-30	True	AATAAA	-13
PB.4430.9	chr16	+	4526	21	incomplete-splice_match	RBL2	ENST00000262133.10	4906	22	4596	3	3397	-2	5prime_fragment	FALSE	canonical	1	266437	junction_2	150583.34112331283	NA	3	NA	TRUE	NA	NA	NA	C	coding	1008	3027	154	3180	15.0	-6765	False	AATAAA	-13
PB.11295.1	chr8	+	3064	1	genic	AC027031.2	novel	NA	NA	NA	NA	34	342	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-67	True	GATAAA	-10
PB.6367.1	chr2	+	1887	7	full-splice_match	MAPRE3	ENST00000233121.6	1892	7	-2	7	-2	-7	multi-exon	FALSE	canonical	1	141930	junction_1	208266.019300437	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	201	1046	35.0	-86	False	AATAAA	-11
PB.7386.12	chr20	+	3958	12	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	-8	-20	intron_retention	FALSE	canonical	1	483042	junction_1	256830.40411633896	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	2298	3077	15.0	2	True	AGTAAA	-14
PB.7124.1	chr20	+	2052	4	full-splice_match	TRIB3	ENST00000217233.7	2499	4	441	6	-188	-6	multi-exon	FALSE	canonical	1	265086	junction_1	112653.52664993079	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	113	1189	30.0	31	True	AATAAA	-12
PB.7124.3	chr20	+	2167	4	full-splice_match	TRIB3	ENST00000449710.5	1070	4	28	-1125	-23	-6	multi-exon	FALSE	canonical	1	17218	junction_1	218977.8686250178	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	228	1304	30.0	-38	True	AATAAA	-12
PB.7124.2	chr20	+	1933	4	novel_not_in_catalog	TRIB3	novel	877	5	NA	NA	-228	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	226748.61277341182	NA	7	NA	TRUE	NA	NA	NA	C	coding	215	648	423	1070	30.0	-9	True	AATAAA	-12
PB.8546.8	chr3	-	2420	19	novel_not_in_catalog	MCCC1	novel	2545	19	NA	NA	7	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	86645.26021658657	NA	12	2	TRUE	NA	NA	NA	C	coding	613	1842	72	1913	20.0	8	True	AATAAA	-20
PB.6766.1	chr2	-	2641	12	novel_in_catalog	GTDC1	novel	10514	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	40221	junction_11	36542.62375015585	NA	0	NA	TRUE	NA	NA	NA	B	coding	458	1377	229	1605	40.0	-10	True	AATAAA	-30
PB.12233.1	chrX	+	1829	3	full-splice_match	PGRMC1	ENST00000217971.7	1911	3	81	1	81	0	multi-exon	FALSE	canonical	1	1242357	junction_1	148165.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	195	588	31	618	25.0	-18	True	AATAAA	-17
PB.10484.6	chr7	+	2491	14	novel_in_catalog	SEPT7	novel	509	4	NA	NA	-33	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	486600.6310844277	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	326	1480	25.0	-36	False	AATAAA	-14
PB.3306.15	chr14	-	3494	1	novel_in_catalog	METTL3	novel	2015	11	NA	NA	9	-185	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	10	True	ATTAAA	-18
PB.3306.14	chr14	-	1981	3	full-splice_match	METTL3	ENST00000538267.5	1553	3	-83	-345	0	-344	multi-exon	FALSE	canonical	1	473795	junction_2	143124.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	120	857	100.0	-3	True	NA	NA
PB.3306.13	chr14	-	2004	11	novel_not_in_catalog	METTL3	novel	1462	8	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	15015	junction_7	225486.76463251672	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	131	1048	20.0	-14	True	AATAAA	-12
PB.3306.12	chr14	-	3116	7	novel_in_catalog	METTL3	novel	1462	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	473795	junction_6	113596.5013566537	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	120	1427	20.0	-3	True	AATAAA	-12
PB.3306.11	chr14	-	1888	10	novel_in_catalog	METTL3	novel	1462	8	NA	NA	-12	0	intron_retention	FALSE	canonical	1	8249	junction_2	237460.8118283369	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	100	1776	25.0	17	True	AATAAA	-13
PB.3306.10	chr14	-	1888	11	novel_not_in_catalog	METTL3	novel	1462	8	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	220293.61153435658	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	118	1776	25.0	-1	True	AATAAA	-13
PB.6974.5	chr2	-	1809	5	novel_in_catalog	METTL21A	novel	869	5	NA	NA	-25	-13	combination_of_known_junctions	FALSE	canonical	1	13514	junction_2	82076.01208750033	NA	8	NA	TRUE	NA	NA	NA	C	coding	236	711	170	880	100.0	-11	True	NA	NA
PB.11700.39	chr9	+	1940	5	incomplete-splice_match	SLC44A1	ENST00000470972.5	10433	17	121722	6916	10427	-5588	intron_retention	FALSE	canonical	1	339508	junction_4	106406.05095693571	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	207	566	100.0	-609	False	AATACA	-11
PB.2015.10	chr11	+	3731	9	novel_not_in_catalog	NAA40	novel	4707	7	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	3529	junction_3	100929.6376550887	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	278	892	15.0	-6	True	AATAAA	-14
PB.11295.9	chr8	+	3480	14	novel_in_catalog	OXR1	novel	3599	15	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	1	12876	junction_1	100742.99160618227	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	277	2553	50.0	-2	True	AATATA	-22
PB.2267.6	chr11	+	2103	14	incomplete-splice_match	DDX10	ENST00000526794.1	6707	17	-50	83742	3	-2975	3prime_fragment	FALSE	canonical	1	28579	junction_2	49880.598582245155	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2019	83	2101	70.0	3	True	AAGAAA	-24
PB.10484.1	chr7	+	2212	12	full-splice_match	SEPT7	ENST00000435235.6	1584	12	177	-805	0	0	multi-exon	FALSE	canonical	1	21689	junction_1	310276.7444747265	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	52	1200	30.0	-3	True	AATAAA	-15
PB.9013.2	chr4	-	4727	15	novel_not_in_catalog	ZNF827	novel	7463	15	NA	NA	-388	-7	any annotated donor/acceptor	FALSE	canonical	1	2403	junction_13	36366.494946290484	NA	2	NA	TRUE	NA	NA	NA	C	coding	1079	3240	617	3856	90.0	0	True	NA	NA
PB.3952.14	chr15	+	3481	23	novel_in_catalog	KIF23	novel	3723	23	NA	NA	26	1	combination_of_known_junctions	FALSE	canonical	1	5996	junction_10	139869.05202344066	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	1453	2871	40.0	-2	True	ATTAAA	-13
PB.3952.15	chr15	+	4472	21	novel_not_in_catalog	KIF23	novel	3723	23	NA	NA	28	1	intron_retention	FALSE	canonical	1	182	junction_18	128567.49881928753	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	58	2499	40.0	0	True	ATTAAA	-13
PB.3952.16	chr15	+	2866	18	incomplete-splice_match	KIF23	ENST00000352331.8	3351	22	7687	8	-909	1	5prime_fragment	FALSE	canonical	1	138411	junction_3	107300.60204576714	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	49	2256	40.0	7547	False	ATTAAA	-13
PB.3952.10	chr15	+	3668	24	novel_in_catalog	KIF23	novel	3723	23	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	1	89010	junction_7	130667.31264316844	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2925	134	3058	40.0	-16	True	ATTAAA	-13
PB.3952.11	chr15	+	4061	21	novel_in_catalog	KIF23	novel	3723	23	NA	NA	9	1	intron_retention	FALSE	canonical	1	124906	junction_16	127190.09418004022	NA	2	NA	TRUE	NA	NA	NA	C	coding	800	2403	1049	3451	40.0	-15	True	ATTAAA	-13
PB.3952.12	chr15	+	3631	23	full-splice_match	KIF23	ENST00000647715.1	3620	23	-14	3	10	-1	multi-exon	FALSE	canonical	1	124906	junction_18	122779.06102046954	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2883	132	3014	20.0	-14	True	ATTAAA	-20
PB.3952.13	chr15	+	4088	22	novel_in_catalog	KIF23	novel	3723	23	NA	NA	0	1	intron_retention	FALSE	canonical	1	89010	junction_5	135776.94367922246	NA	2	1	TRUE	NA	NA	NA	C	coding	814	2445	1034	3478	40.0	0	True	ATTAAA	-13
PB.2267.7	chr11	+	1826	13	incomplete-splice_match	DDX10	ENST00000526794.1	6707	17	-47	198999	6	47450	3prime_fragment	FALSE	canonical	1	28579	junction_2	50994.78447106135	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1746	80	1825	60.0	6	True	NA	NA
PB.8788.10	chr4	+	2877	15	novel_not_in_catalog	CEP135	novel	5562	26	NA	NA	16120	-822	any annotated donor/acceptor	FALSE	canonical	1	2204	junction_1	31033.101513561614	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	138	1943	60.0	0	True	NA	NA
PB.706.1	chr1	-	3289	1	full-splice_match	HIST2H2BF	ENST00000369167.2	1954	1	-1336	1	-1322	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	136	411	15	425	20.0	-1326	False	ATTAAA	-17
PB.8788.11	chr4	+	3654	15	novel_not_in_catalog	CEP135	novel	5562	26	NA	NA	16142	-9	any annotated donor/acceptor	FALSE	canonical	1	418	junction_1	31361.064637605683	NA	2	NA	TRUE	NA	NA	NA	C	coding	574	1725	183	1907	70.0	22	True	AATAAA	-8
PB.11790.13	chr9	+	3096	17	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	4	0	intron_retention	FALSE	canonical	1	58008	junction_1	68620.24196435111	NA	1	NA	TRUE	NA	NA	NA	C	coding	972	2916	179	3094	80.0	-12	True	NA	NA
PB.10484.3	chr7	+	4114	13	full-splice_match	SEPT7	ENST00000399034.7	4399	13	285	0	-1	0	multi-exon	FALSE	canonical	1	60805	junction_1	462118.9043617153	NA	2	1	TRUE	NA	NA	NA	C	coding	384	1155	148	1302	35.0	-2	True	AATAAA	-15
PB.8890.12	chr4	+	2629	11	novel_not_in_catalog	METAP1	novel	2791	11	NA	NA	9935	-2	any annotated donor/acceptor	FALSE	canonical	1	3448	junction_1	179966.07469009265	NA	4	1	TRUE	NA	NA	NA	C	coding	293	882	254	1135	25.0	NA	False	ATTAAA	-23
PB.8890.10	chr4	+	2880	14	novel_not_in_catalog	METAP1	novel	2791	11	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	191	junction_6	262071.18385865493	NA	8	1	TRUE	NA	NA	NA	C	coding	272	819	571	1389	30.0	19	True	ATTAAA	-20
PB.9791.4	chr6	+	1364	2	full-splice_match	HIST1H2AC	ENST00000602637.1	1462	2	-31	129	27	-129	multi-exon	FALSE	canonical	1	136045	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	62	454	35.0	0	True	AATAAA	-16
PB.11050.1	chr8	+	4437	34	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	16385	junction_4	231826.3680303024	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	652	3555	5.0	1	True	ATTAAA	-20
PB.11050.3	chr8	+	2132	16	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	23	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	158365.6460611188	NA	1	1	TRUE	NA	NA	NA	C	coding	499	1500	218	1717	0.0	0	True	ATTAAA	-17
PB.11050.2	chr8	+	4144	31	full-splice_match	PTK2B	ENST00000346049.9	4147	31	8	-5	8	0	multi-exon	FALSE	canonical	1	256180	junction_1	157692.24037685627	NA	5	NA	TRUE	NA	NA	NA	C	coding	1009	3030	233	3262	5.0	-1324	False	ATTAAA	-20
PB.11050.5	chr8	+	4777	3	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	29	10795	any annotated donor/acceptor	FALSE	canonical	1	7472	junction_2	124354.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	525	959	25.0	-1303	False	NA	NA
PB.9605.3	chr5	+	2342	8	novel_not_in_catalog	CCNG1	novel	919	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	579689.4869255436	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	111	998	10.0	0	True	AATAAA	-14
PB.11050.7	chr8	+	3942	30	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-42	-1	combination_of_known_junctions	FALSE	canonical	1	28846	junction_11	177070.73400168464	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	198	3062	0.0	-36	True	ATTAAA	-18
PB.6801.1	chr2	+	1867	1	antisense	novelGene_LY75-CD302_AS_novelGene_LY75_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	47	144	164	307	10.0	182	False	NA	NA
PB.11050.9	chr8	+	3928	29	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	-28	0	no_combination_of_known_junctions	FALSE	canonical	1	20250	junction_24	179854.91497472714	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	184	3051	0.0	-22	True	ATTAAA	-15
PB.7473.1	chr21	-	4400	2	incomplete-splice_match	ATP5PF	ENST00000486002.1	876	3	-5	761	-5	-761	3prime_fragment	FALSE	canonical	1	3471594	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-6	True	NA	NA
PB.10754.1	chr7	-	1437	8	full-splice_match	POLR2J3	ENST00000486319.5	1532	8	96	-1	0	0	multi-exon	FALSE	canonical	1	492	junction_6	70083.92538687208	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	115	939	15.0	NA	False	AATAAA	-16
PB.2267.5	chr11	+	2505	17	full-splice_match	DDX10	ENST00000526794.1	6707	17	-53	4255	0	64	multi-exon	FALSE	canonical	1	28579	junction_2	50916.69676724424	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2418	86	2503	50.0	0	True	GATAAA	-21
PB.10754.2	chr7	-	1965	3	full-splice_match	POLR2J3	ENST00000511313.5	4630	3	11	2654	-5	666	multi-exon	FALSE	canonical	1	492	junction_1	54.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	NA	False	NA	NA
PB.10484.2	chr7	+	2579	14	novel_in_catalog	SEPT7	novel	509	4	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	1	3631	junction_1	360058.1109143455	NA	1	1	TRUE	NA	NA	NA	C	coding	407	1224	344	1567	30.0	-179	False	AATAAA	-15
PB.6125.5	chr19	+	2081	4	novel_not_in_catalog	PPP1R15A	novel	2378	3	NA	NA	35	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	441521.3306144512	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	235	1998	20.0	6	True	AATAAA	-14
PB.6125.4	chr19	+	1996	3	novel_not_in_catalog	PPP1R15A	novel	2378	3	NA	NA	30	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	505745.0	NA	17	NA	TRUE	NA	NA	NA	C	coding	555	1668	240	1907	15.0	1	True	AATAAA	-20
PB.6125.3	chr19	+	2353	3	full-splice_match	PPP1R15A	ENST00000200453.5	2378	3	29	-4	29	4	multi-exon	FALSE	canonical	1	837258	junction_2	87116.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	674	2025	241	2265	20.0	0	True	AATAAA	-19
PB.6125.2	chr19	+	1980	2	incomplete-splice_match	PPP1R15A	ENST00000200453.5	2378	3	971	0	-955	0	5prime_fragment	FALSE	canonical	1	837258	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	558	1677	220	1896	20.0	-7266	False	AATAAA	-15
PB.6125.1	chr19	+	3064	2	incomplete-splice_match	PPP1R15A	ENST00000200453.5	2378	3	29	0	29	0	intron_retention	FALSE	canonical	1	1011490	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	241	2100	20.0	0	True	AATAAA	-15
PB.848.8	chr1	+	2626	5	novel_not_in_catalog	PEA15	novel	2471	4	NA	NA	5	-7	any annotated donor/acceptor	FALSE	canonical	1	16809	junction_1	1585147.8922158966	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	351	743	45.0	1	True	AATAAA	-18
PB.7279.17	chr20	+	2032	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	1568	junction_1	873933.4378593422	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	490	1731	40.0	-2	True	AATAAA	-15
PB.3090.19	chr13	-	1163	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	57	4265	6	-62	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	128	775	75.0	5	True	NA	NA
PB.3090.16	chr13	-	2274	5	novel_not_in_catalog	HMGB1	novel	5485	5	NA	NA	120	-4	any annotated donor/acceptor	FALSE	canonical	1	2251	junction_4	162236.9429083586	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	124	771	40.0	138	False	AATAAA	-20
PB.3090.11	chr13	-	2260	5	novel_not_in_catalog	HMGB1	novel	5485	5	NA	NA	117	3	any annotated donor/acceptor	FALSE	canonical	1	8880	junction_1	160524.71763018303	NA	4	NA	TRUE	NA	NA	NA	C	coding	215	648	103	750	25.0	1802	False	AATAAA	-27
PB.3090.10	chr13	-	2436	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	85	2964	34	182	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	100	747	35.0	52	False	TATAAA	-31
PB.3090.13	chr13	-	2315	5	full-splice_match	HMGB1	ENST00000341423.9	5485	5	22	3148	-5	-2	multi-exon	FALSE	canonical	1	6253	junction_4	161507.1393731559	NA	3	NA	TRUE	NA	NA	NA	C	coding	215	648	163	810	35.0	-11	True	AATAAA	-22
PB.3090.12	chr13	-	3316	4	novel_in_catalog	HMGB1	novel	5485	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	6253	junction_3	170319.33602174735	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	160	684	35.0	-8	True	AATAAA	-22
PB.1286.2	chr10	+	3793	7	incomplete-splice_match	ATP5F1C	ENST00000493053.5	1096	9	15	2055	3	-2047	3prime_fragment	FALSE	canonical	1	53649	junction_1	1035073.8826191749	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	159	905	100.0	-15	False	NA	NA
PB.9791.8	chr6	+	1521	2	full-splice_match	HIST1H2AC	ENST00000602637.1	1462	2	-30	-29	28	-3	multi-exon	FALSE	canonical	1	136045	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	61	453	35.0	1	True	AATAAA	-21
PB.10744.6	chr7	-	2573	19	novel_not_in_catalog	PLOD3	novel	1098	7	NA	NA	276	-2	any annotated donor/acceptor	FALSE	canonical	1	96	junction_11	241573.21552665744	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	124	2271	15.0	17	True	AATAAA	-19
PB.1713.4	chr10	-	9648	14	full-splice_match	MKI67	ENST00000368653.7	11417	14	-181	1950	0	-1950	multi-exon	FALSE	canonical	1	90457	junction_8	210591.01456637384	NA	6	NA	TRUE	NA	NA	NA	C	coding	2896	8691	377	9067	35.0	-15	True	AATAAA	-15
PB.637.2	chr1	+	2406	8	full-splice_match	VANGL1	ENST00000355485.6	8691	8	19	6266	19	104	multi-exon	FALSE	canonical	1	46602	junction_1	38560.48695549498	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	253	1827	20.0	2	True	NA	NA
PB.6323.1	chr2	+	3498	2	full-splice_match	FAM84A	ENST00000295092.2	6355	2	31	2826	17	-7	multi-exon	FALSE	canonical	1	137276	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	292	879	258	1136	15.0	-5	True	ATTAAA	-14
PB.10395.12	chr7	-	1041	5	full-splice_match	KDELR2	ENST00000258739.8	2884	5	52	1791	0	0	multi-exon	FALSE	canonical	1	1596339	junction_4	267192.2000063812	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	134	772	40.0	-39	True	AATAAA	-17
PB.10395.13	chr7	-	1401	2	full-splice_match	KDELR2	ENST00000462052.1	382	2	-45	-974	2	974	multi-exon	FALSE	canonical	1	1596339	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	2	310	95.0	-37	True	NA	NA
PB.10395.10	chr7	-	1908	4	full-splice_match	KDELR2	ENST00000490996.1	655	4	-128	-1125	5	15	multi-exon	FALSE	canonical	1	10450	junction_1	894541.1441107049	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	129	689	35.0	-34	True	ATTAAA	-28
PB.10395.11	chr7	-	1913	5	full-splice_match	KDELR2	ENST00000258739.8	2884	5	58	913	6	-232	multi-exon	FALSE	canonical	1	1596339	junction_4	267192.2000063812	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	128	766	20.0	-33	True	AATAAA	-27
PB.8779.45	chr4	+	2253	19	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	0	5	any annotated donor/acceptor	FALSE	canonical	1	22	junction_4	252416.35743419794	NA	3	1	TRUE	NA	NA	NA	C	coding	407	1224	806	2029	50.0	2	True	AATAAA	-24
PB.10744.2	chr7	-	2667	19	full-splice_match	PLOD3	ENST00000223127.7	2920	19	243	10	243	-10	multi-exon	FALSE	canonical	1	370221	junction_18	182870.59288264473	NA	9	NA	TRUE	NA	NA	NA	C	coding	738	2217	157	2373	20.0	-16	True	AATAAA	-11
PB.6139.1	chr19	+	2593	2	incomplete-splice_match	RPS11	ENST00000270625.6	614	5	0	1	0	0	intron_retention	FALSE	canonical	1	3262734	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	85	258	84	341	20.0	-1592	False	AATAAA	-18
PB.3302.18	chr14	-	4366	26	novel_not_in_catalog	SUPT16H	novel	4684	26	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	283563.22311708616	NA	1	1	TRUE	NA	NA	NA	C	coding	1025	3078	96	3173	25.0	-4	True	AATAAA	-28
PB.3302.13	chr14	-	4750	25	novel_in_catalog	SUPT16H	novel	4684	26	NA	NA	-14	0	intron_retention	FALSE	canonical	1	153336	junction_23	277957.5822018251	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	101	2518	25.0	14	False	AATAAA	-29
PB.7587.1	chr22	-	2186	3	intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.3302.17	chr14	-	2755	12	novel_not_in_catalog	SUPT16H	novel	4684	26	NA	NA	-20	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	269191.84356339223	NA	1	1	TRUE	NA	NA	NA	C	coding	484	1455	107	1561	25.0	8	True	AATAAA	-29
PB.7513.1	chr21	+	4186	16	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	-28	-16	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	177398.91668457905	NA	1	NA	TRUE	NA	NA	NA	B	coding	784	2355	498	2852	30.0	-7023	False	AATAAA	-20
PB.3302.14	chr14	-	4676	27	novel_in_catalog	SUPT16H	novel	4684	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	10794	junction_24	290541.1580585468	NA	1	NA	TRUE	NA	NA	NA	C	coding	982	2949	534	3482	25.0	2	True	AATAAA	-29
PB.8779.46	chr4	+	1839	18	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	2	-49	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	221999.11432294728	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1647	193	1839	70.0	4	True	NA	NA
PB.1008.1	chr1	+	2504	1	antisense	novelGene_UCHL5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	112	339	170	508	90.0	NA	False	NA	NA
PB.6974.2	chr2	-	2370	5	novel_in_catalog	METTL21A	novel	869	5	NA	NA	15	2	combination_of_known_junctions	FALSE	canonical	1	58039	junction_4	63593.23554189943	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	82	738	30.0	-3	True	AATAAA	-19
PB.2636.1	chr12	+	1114	4	full-splice_match	PRR13	ENST00000429243.6	1229	4	119	-4	-8	1	multi-exon	FALSE	canonical	1	33291	junction_2	76138.18905560249	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	90	536	20.0	-951	False	AATAAA	-19
PB.2636.2	chr12	+	1994	3	novel_in_catalog	PRR13	novel	1229	4	NA	NA	2	-3	intron_retention	FALSE	canonical	1	33291	junction_1	90891.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	965	1411	15.0	-924	False	AATAAA	-24
PB.8779.40	chr4	+	3197	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	228574.1557190868	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	196	1785	15.0	1	True	TATAAA	-35
PB.11084.1	chr8	+	1629	2	novel_not_in_catalog	ZNF703	novel	3349	2	NA	NA	5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	5	True	AATAAA	-21
PB.7513.5	chr21	+	4193	17	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	12	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	175378.44725140117	NA	0	NA	TRUE	NA	NA	NA	B	coding	459	1380	1472	2851	40.0	-38	True	AATAAA	-28
PB.2267.1	chr11	+	3198	18	full-splice_match	DDX10	ENST00000322536.7	3264	18	55	11	-2	1	multi-exon	FALSE	canonical	1	28579	junction_2	52204.362178496805	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	75	2702	50.0	11	True	AATAAA	-13
PB.8779.42	chr4	+	4994	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	1	1716	intron_retention	FALSE	canonical	1	199597	junction_1	201210.13564651483	NA	2	NA	TRUE	NA	NA	NA	C	coding	556	1671	196	1866	45.0	1	True	AATAAA	-18
PB.4938.1	chr17	+	2002	4	full-splice_match	CISD3	ENST00000613478.1	2074	4	88	-16	-36	-7	multi-exon	FALSE	canonical	1	263035	junction_1	251999.1276655977	NA	1	NA	TRUE	NA	NA	NA	A	coding	127	384	37	420	55.0	-18	True	CATAAA	-40
PB.6216.2	chr19	-	3441	24	novel_in_catalog	PPP6R1	novel	2389	7	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	1	51672	junction_23	314724.7971509776	NA	0	NA	TRUE	NA	NA	NA	B	coding	881	2646	48	2693	20.0	-1	True	AATAAA	-16
PB.8942.1	chr4	+	4545	15	incomplete-splice_match	ALPK1	ENST00000458497.5	5410	16	27	935	0	7	intron_retention	FALSE	canonical	1	31459	junction_2	21419.009745779473	NA	0	NA	TRUE	NA	NA	NA	C	coding	1245	3738	253	3990	30.0	-31	True	NA	NA
PB.8942.2	chr4	+	3890	4	incomplete-splice_match	ALPK1	ENST00000515330.5	1008	7	-27	39780	0	1067	3prime_fragment	FALSE	canonical	1	31459	junction_2	19063.353400933658	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	254	589	45.0	-32	True	TATAAA	-25
PB.8942.3	chr4	+	5215	4	incomplete-splice_match	ALPK1	ENST00000515330.5	1008	7	-41	38469	12	2378	3prime_fragment	FALSE	canonical	1	31459	junction_2	19063.353400933658	NA	6	NA	TRUE	NA	NA	NA	C	coding	111	336	268	603	65.0	-46	True	NA	NA
PB.8942.4	chr4	+	4240	15	novel_in_catalog	ALPK1	novel	304	2	NA	NA	-11	-58	combination_of_known_junctions	FALSE	canonical	1	3454	junction_3	27097.958255886275	NA	0	NA	TRUE	NA	NA	NA	C	coding	1166	3501	344	3844	20.0	-43	True	NA	NA
PB.8942.5	chr4	+	3835	4	full-splice_match	ALPK1	ENST00000509688.5	2749	4	-21	-1065	0	1065	multi-exon	FALSE	canonical	1	17860	junction_2	25148.39897267595	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	201	536	40.0	-31	True	TATAAA	-23
PB.8942.6	chr4	+	5376	16	full-splice_match	ALPK1	ENST00000458497.5	5410	16	23	11	-3	-11	multi-exon	FALSE	canonical	1	31459	junction_2	21560.968702624556	NA	0	NA	TRUE	NA	NA	NA	C	coding	1244	3735	257	3991	85.0	-35	True	NA	NA
PB.6216.5	chr19	-	3230	23	novel_not_in_catalog	PPP6R1	novel	2389	7	NA	NA	410	-1	any annotated donor/acceptor	FALSE	canonical	1	19740	junction_22	315419.59597821103	NA	4	1	TRUE	NA	NA	NA	B	coding	754	2265	219	2483	15.0	8806	False	AATAAA	-15
PB.10389.6	chr7	+	2747	12	novel_not_in_catalog	USP42	novel	5155	18	NA	NA	22657	-8	any annotated donor/acceptor	FALSE	canonical	1	2139	junction_9	33307.420491809055	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2721	27	2747	80.0	NA	False	NA	NA
PB.10389.5	chr7	+	3534	14	novel_in_catalog	USP42	novel	5155	18	NA	NA	5	-8	no_combination_of_known_junctions	FALSE	canonical	1	987	junction_3	33210.20641576193	NA	0	NA	TRUE	NA	NA	NA	C	coding	1158	3474	61	3534	80.0	33	True	NA	NA
PB.6216.9	chr19	-	3002	24	novel_in_catalog	PPP6R1	novel	2389	7	NA	NA	-4	213	combination_of_known_junctions	FALSE	canonical	1	51672	junction_23	314724.7971509776	NA	0	NA	TRUE	NA	NA	NA	B	coding	881	2646	106	2751	55.0	-5	True	NA	NA
PB.10389.3	chr7	+	3926	17	novel_not_in_catalog	USP42	novel	5155	18	NA	NA	-12	-520	any annotated donor/acceptor	FALSE	canonical	1	2283	junction_4	44354.707706339854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3171	756	3926	85.0	14	True	NA	NA
PB.10389.2	chr7	+	3675	15	incomplete-splice_match	USP42	ENST00000479544.6	4286	16	-23	2192	2	-8	3prime_fragment	FALSE	canonical	1	51561	junction_1	19829.755668758327	NA	0	NA	TRUE	NA	NA	NA	C	coding	1195	3585	91	3675	80.0	3	True	NA	NA
PB.10389.1	chr7	+	3841	16	novel_not_in_catalog	USP42	novel	5155	18	NA	NA	-15	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	38473.58931908139	NA	25	2	TRUE	NA	NA	NA	C	coding	1019	3057	785	3841	80.0	-14	True	NA	NA
PB.7533.11	chr21	-	3881	2	full-splice_match	ZBTB21	ENST00000398511.3	5608	2	24	1703	3	1066	multi-exon	FALSE	canonical	1	60924	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	1066	3201	126	3326	35.0	-10	True	AATAAA	-24
PB.7533.10	chr21	-	5114	2	full-splice_match	ZBTB21	ENST00000398511.3	5608	2	33	461	3	-461	multi-exon	FALSE	canonical	1	60924	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	117	3317	20.0	-1	True	AATAAA	-19
PB.7533.12	chr21	-	3458	2	full-splice_match	ZBTB21	ENST00000398511.3	5608	2	20	2130	-1	639	multi-exon	FALSE	canonical	1	60924	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	130	3330	40.0	-14	True	AATAAA	-27
PB.10436.6	chr7	-	3841	15	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	143	-1	combination_of_known_junctions	FALSE	canonical	1	5782	junction_14	43358.99816129312	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	421	1689	15.0	7405	False	AATAAA	-21
PB.5151.15	chr17	+	2157	1	full-splice_match	VMP1	ENST00000592790.1	4325	1	502	1666	482	274	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	124	375	503	877	20.0	-9014	False	TATAAA	-19
PB.5151.14	chr17	+	4318	1	full-splice_match	VMP1	ENST00000592790.1	4325	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	124	375	1005	1379	25.0	0	True	AATAAA	-29
PB.5151.13	chr17	+	3984	1	full-splice_match	VMP1	ENST00000592790.1	4325	1	-41	382	35	-382	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	124	375	1046	1420	60.0	2	True	NA	NA
PB.5151.12	chr17	+	1841	2	full-splice_match	VMP1	ENST00000587470.1	995	2	-72	-774	24	-3	multi-exon	FALSE	canonical	1	1761798	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-9	True	AATAAA	-17
PB.5151.11	chr17	+	1289	2	full-splice_match	VMP1	ENST00000587470.1	995	2	-20	-274	0	274	multi-exon	FALSE	canonical	1	1761798	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	TATAAA	-19
PB.5151.10	chr17	+	1923	11	novel_in_catalog	VMP1	novel	231	2	NA	NA	-4	274	combination_of_known_junctions	FALSE	canonical	1	18237	junction_3	398182.5374691989	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	316	1245	20.0	-5	True	TATAAA	-19
PB.8524.16	chr3	+	4019	25	novel_in_catalog	ECT2	novel	4087	24	NA	NA	0	-290	combination_of_known_junctions	FALSE	canonical	1	13538	junction_24	124042.88237837097	NA	0	NA	TRUE	NA	NA	NA	C	coding	927	2784	155	2938	20.0	0	True	ATTAAA	-18
PB.3235.1	chr13	+	2166	9	full-splice_match	UBAC2	ENST00000403766.7	1375	9	103	-894	-10	0	multi-exon	FALSE	canonical	1	306958	junction_1	45822.94524307664	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	33	1067	25.0	-9	True	AATAAA	-24
PB.3235.2	chr13	+	2229	9	novel_not_in_catalog	UBAC2	novel	748	5	NA	NA	-39	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	178589.87976716374	NA	10	2	TRUE	NA	NA	NA	C	coding	157	474	664	1137	20.0	-6	True	AATAAA	-17
PB.8817.16	chr4	-	6426	25	novel_in_catalog	ANKRD17	novel	10784	34	NA	NA	-42	1625	intron_retention	FALSE	canonical	1	48331	junction_1	112937.46795805209	NA	0	NA	TRUE	NA	NA	NA	B	coding	1480	4443	173	4615	15.0	0	True	NA	NA
PB.10436.5	chr7	-	3852	14	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	1	1194	junction_13	43583.49329639789	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	195	1700	15.0	8797	False	AATAAA	-21
PB.6316.9	chr2	-	1828	7	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	0	425	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	30774.991450942038	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	278	1123	40.0	4	False	ATTAAA	-26
PB.4266.9	chr16	+	3800	22	full-splice_match	PDXDC1	ENST00000569715.5	3775	22	-19	-6	-1	6	multi-exon	FALSE	canonical	1	12324	junction_7	306802.323885764	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	97	2382	40.0	-22	True	AATAAA	-24
PB.4266.8	chr16	+	2744	18	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	-11	11001	intron_retention	TRUE	canonical	0	0	junction_17	338969.071616819	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	132	1628	75.0	-6	True	NA	NA
PB.6316.8	chr2	-	2253	6	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	8940.445657795812	NA	0	NA	TRUE	NA	NA	NA	B	coding	162	489	455	943	45.0	-3	False	NA	NA
PB.4266.1	chr16	+	2380	17	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	333159.8945859122	NA	1	1	TRUE	NA	NA	NA	C	coding	483	1452	108	1559	30.0	-67	False	AATAAA	-17
PB.9540.20	chr5	-	1979	4	incomplete-splice_match	NR3C1	ENST00000394464.6	6795	9	-8	32166	-8	-9536	3prime_fragment	FALSE	canonical	1	185341	junction_3	80846.92235329679	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1467	512	1978	50.0	-23	True	AATGAA	-9
PB.4266.2	chr16	+	3850	23	full-splice_match	PDXDC1	ENST00000396410.8	4521	23	25	646	-1	-1	multi-exon	FALSE	canonical	1	12324	junction_8	286546.6489966633	NA	3	1	TRUE	NA	NA	NA	C	coding	788	2367	73	2439	35.0	2	True	AATAAA	-17
PB.4266.5	chr16	+	4598	23	full-splice_match	PDXDC1	ENST00000396410.8	4521	23	-68	-9	4	9	multi-exon	FALSE	canonical	1	12324	junction_8	286546.6489966633	NA	2	NA	TRUE	NA	NA	NA	C	coding	788	2367	166	2532	55.0	24	True	AATAAA	-26
PB.4266.4	chr16	+	4066	24	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	-7	-5	intron_retention	FALSE	canonical	1	2048	junction_1	316996.41609117645	NA	2	NA	TRUE	NA	NA	NA	C	coding	773	2322	338	2659	25.0	13	True	AATAAA	-13
PB.4266.7	chr16	+	2255	15	incomplete-splice_match	PDXDC1	ENST00000570001.5	4828	22	-65	7919	9	-37	3prime_fragment	FALSE	canonical	1	12324	junction_8	319296.7957222799	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	161	1519	75.0	29	True	NA	NA
PB.4266.6	chr16	+	3885	23	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	4	-3	intron_retention	FALSE	canonical	1	12324	junction_8	307191.59970023675	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	45	2216	30.0	-4	True	AATAAA	-15
PB.7047.20	chr2	+	4988	7	incomplete-splice_match	RHBDD1	ENST00000392062.6	5151	9	3402	0	1809	0	5prime_fragment	FALSE	canonical	1	51965	junction_1	55407.20681087735	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	362	1309	60.0	2923	False	NA	NA
PB.9238.1	chr5	-	3118	13	novel_in_catalog	PLK2	novel	2960	14	NA	NA	1	0	intron_retention	FALSE	canonical	1	526945	junction_12	61480.08530562966	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	1558	2520	25.0	0	True	AATAAA	-17
PB.9020.8	chr4	+	3009	23	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	4816	-1	intron_retention	FALSE	canonical	1	432	junction_1	60108.786570975826	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	73	2316	15.0	-5623	False	AATAAA	-12
PB.11185.14	chr8	-	4089	12	full-splice_match	STAU2	ENST00000355780.9	4061	12	-33	5	6	-5	multi-exon	FALSE	canonical	1	57923	junction_1	80314.49220192389	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	253	1692	45.0	597	False	AGTAAA	-18
PB.11780.20	chr9	+	1995	10	full-splice_match	NEK6	ENST00000545174.5	2573	10	42	536	32	-536	multi-exon	FALSE	canonical	1	37822	junction_1	217680.49572818677	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	99	1040	55.0	-30	True	NA	NA
PB.1542.14	chr10	+	2859	7	novel_in_catalog	KIF11	novel	4860	22	NA	NA	44009	-2	intron_retention	FALSE	canonical	1	233058	junction_2	106778.30439084212	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	51	1262	25.0	NA	False	AATAAA	-45
PB.9020.6	chr4	+	3434	24	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	27	0	intron_retention	FALSE	canonical	1	6668	junction_4	65897.49508613814	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	734	2740	20.0	2	True	AATAAA	-13
PB.11185.16	chr8	-	3990	11	novel_in_catalog	STAU2	novel	2646	12	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	26951	junction_10	94364.20190776796	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	154	1593	45.0	583	False	AGTAAA	-18
PB.1107.5	chr1	-	6268	8	full-splice_match	LPGAT1	ENST00000366997.8	7782	8	6	1508	6	-1508	multi-exon	FALSE	canonical	1	17621	junction_7	88684.87104808986	NA	3	NA	TRUE	NA	NA	NA	C	coding	370	1113	222	1334	20.0	-4	True	AATAAA	-36
PB.9540.21	chr5	-	1646	4	incomplete-splice_match	NR3C1	ENST00000503201.1	2594	9	4	28286	4	-9536	3prime_fragment	FALSE	canonical	1	64849	junction_3	133317.4773163669	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1467	179	1645	50.0	1	True	AATGAA	-9
PB.3495.1	chr14	-	2844	1	genic	AL161756.1_ESR2	novel	NA	NA	NA	NA	-26	13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	134	405	145	549	100.0	-53	False	NA	NA
PB.10779.9	chr7	+	4855	7	full-splice_match	CBLL1	ENST00000432748.5	573	7	3	-4285	0	798	multi-exon	FALSE	canonical	1	26507	junction_2	134513.59675966675	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	456	1568	30.0	0	True	AATAAA	-18
PB.565.10	chr1	-	2061	11	full-splice_match	DBT	ENST00000370132.8	10799	11	-26	8764	-26	-8764	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	41	1489	80.0	-8	False	NA	NA
PB.3576.1	chr14	-	1816	5	full-splice_match	ERG28	ENST00000256319.6	2633	5	329	488	329	-488	multi-exon	FALSE	canonical	1	481923	junction_4	163751.4180814551	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	118	540	50.0	15	True	NA	NA
PB.5095.4	chr17	-	3235	6	novel_in_catalog	PHB	novel	1908	7	NA	NA	-2	230	intron_retention	FALSE	canonical	1	410219	junction_5	581803.7730349984	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	76	693	45.0	-1	True	AATAAA	-22
PB.5095.2	chr17	-	1912	8	full-splice_match	PHB	ENST00000614445.4	1952	8	36	4	7	-1	multi-exon	FALSE	canonical	1	41650	junction_7	675015.295562513	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	155	973	10.0	28	False	AATAAA	-23
PB.5095.3	chr17	-	1047	7	full-splice_match	PHB	ENST00000300408.7	1832	7	0	785	0	231	multi-exon	FALSE	canonical	1	410219	junction_6	533864.712383333	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	74	892	50.0	1	True	AATAAA	-23
PB.5095.1	chr17	-	1933	7	full-splice_match	PHB	ENST00000300408.7	1832	7	-102	1	-77	-1	multi-exon	FALSE	canonical	1	410219	junction_6	533864.712383333	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	176	994	10.0	9952	False	AATAAA	-23
PB.6307.9	chr2	+	1869	15	full-splice_match	TAF1B	ENST00000263663.9	2387	15	151	367	8	103	multi-exon	FALSE	canonical	1	106270	junction_1	31140.839050684106	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	38	1804	35.0	11	True	NA	NA
PB.9540.22	chr5	-	4908	1	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	46	2028	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	395	1188	2445	3632	95.0	-1	True	NA	NA
PB.99.3	chr1	+	2971	19	full-splice_match	PLOD1	ENST00000196061.4	2940	19	-29	-2	-10	1	multi-exon	FALSE	canonical	1	694532	junction_1	256046.82311270942	NA	17	5	TRUE	NA	NA	NA	C	coding	727	2184	57	2240	30.0	-1	True	ATTAAA	-17
PB.2179.1	chr11	+	2432	2	full-splice_match	TSKU	ENST00000333090.4	2712	2	76	204	76	-194	multi-exon	FALSE	canonical	1	268733	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	99	1160	20.0	-13	True	AAAAAG	-4
PB.6307.5	chr2	+	1225	11	incomplete-splice_match	TAF1B	ENST00000263663.9	2387	15	128	22874	0	-2167	3prime_fragment	FALSE	canonical	1	106270	junction_1	35686.96573484498	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1164	61	1224	65.0	-12	True	NA	NA
PB.6307.4	chr2	+	1409	13	incomplete-splice_match	TAF1B	ENST00000263663.9	2387	15	111	15315	-17	5392	3prime_fragment	FALSE	canonical	1	106270	junction_1	32793.31623551089	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1332	78	1409	65.0	-29	True	NA	NA
PB.6307.7	chr2	+	2062	15	full-splice_match	TAF1B	ENST00000263663.9	2387	15	148	177	5	-177	multi-exon	FALSE	canonical	1	106270	junction_1	31140.839050684106	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	41	1807	35.0	8	True	AAAACA	-27
PB.8524.19	chr3	+	4312	25	novel_in_catalog	ECT2	novel	4087	24	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	8582	junction_2	119244.26499358103	NA	1	NA	TRUE	NA	NA	NA	C	coding	883	2652	426	3077	20.0	16	True	AATAAA	-18
PB.6307.1	chr2	+	1830	15	full-splice_match	TAF1B	ENST00000263663.9	2387	15	82	475	-7	-5	multi-exon	FALSE	canonical	1	106270	junction_1	31140.839050684106	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1722	107	1828	70.0	-58	True	AATACA	-5
PB.2179.2	chr11	+	2604	2	full-splice_match	TSKU	ENST00000333090.4	2712	2	105	3	105	-2	multi-exon	FALSE	canonical	1	268733	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	70	1131	20.0	-13	False	AATAAA	-22
PB.6307.3	chr2	+	2154	15	full-splice_match	TAF1B	ENST00000263663.9	2387	15	101	132	12	-132	multi-exon	FALSE	canonical	1	106270	junction_1	31140.839050684106	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	88	1854	20.0	-39	True	TTTAAA	-21
PB.6307.2	chr2	+	2401	16	novel_in_catalog	TAF1B	novel	2387	15	NA	NA	-6	-33	combination_of_known_junctions	FALSE	canonical	1	4116	junction_3	60625.199124529805	NA	3	NA	TRUE	NA	NA	NA	C	coding	380	1143	860	2002	50.0	-57	True	NA	NA
PB.1294.1	chr10	-	5051	21	novel_in_catalog	UPF2	novel	5569	21	NA	NA	-7	1	no_combination_of_known_junctions	FALSE	canonical	1	5414	junction_16	74320.80380315796	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	106	3774	5.0	8	False	AATAAA	-15
PB.1294.2	chr10	-	3362	16	novel_in_catalog	UPF2	novel	5569	21	NA	NA	34196	0	no_combination_of_known_junctions	FALSE	canonical	1	783	junction_15	81588.92672453917	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	33	2087	10.0	NA	False	AATAAA	-13
PB.1294.5	chr10	-	5137	22	full-splice_match	UPF2	ENST00000397053.6	5369	22	232	0	-104	0	multi-exon	FALSE	canonical	1	11928	junction_21	71382.10120489802	NA	1	NA	TRUE	NA	NA	NA	C	coding	1272	3819	44	3862	10.0	-89	False	AATAAA	-13
PB.1294.7	chr10	-	5212	22	novel_not_in_catalog	UPF2	novel	5569	21	NA	NA	26	0	any annotated donor/acceptor	FALSE	canonical	1	2627	junction_12	72631.47673269408	NA	1	NA	TRUE	NA	NA	NA	C	coding	690	2073	73	2145	10.0	0	True	AATAAA	-13
PB.1294.6	chr10	-	5177	22	full-splice_match	UPF2	ENST00000357604.9	5193	22	15	1	15	0	multi-exon	FALSE	canonical	1	178762	junction_14	49923.354223682836	NA	1	NA	TRUE	NA	NA	NA	C	coding	1272	3819	84	3902	10.0	-11	True	AATAAA	-13
PB.9779.2	chr6	-	1865	6	incomplete-splice_match	TDP2	ENST00000378198.8	2071	7	291	1	44	-1	intron_retention	FALSE	canonical	1	376033	junction_2	96389.14801283389	NA	0	NA	TRUE	NA	NA	NA	B	coding	250	753	303	1055	15.0	-1	True	AATAAA	-16
PB.8633.2	chr3	-	1585	7	full-splice_match	BDH1	ENST00000392378.6	3455	7	77	1793	1	18	multi-exon	FALSE	canonical	1	98238	junction_6	100686.45560683258	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	235	1266	40.0	-6	True	NA	NA
PB.8992.1	chr4	-	2222	5	full-splice_match	NDUFC1	ENST00000539002.5	1198	5	-1080	56	189	-20	multi-exon	FALSE	canonical	1	68788	junction_4	773953.6291701768	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	231	False	AATATA	-32
PB.10009.1	chr6	-	2120	6	full-splice_match	MRPS18A	ENST00000372133.7	1062	6	-3	-1055	-3	1055	multi-exon	FALSE	canonical	1	229421	junction_4	227275.97521691554	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	16	606	20.0	-4	True	AATGAA	-14
PB.10009.2	chr6	-	2877	4	incomplete-splice_match	MRPS18A	ENST00000427312.1	803	5	-1	1222	-1	-1222	3prime_fragment	FALSE	canonical	1	229421	junction_2	165749.2230938722	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	14	685	95.0	-2	True	NA	NA
PB.9540.23	chr5	-	2973	2	incomplete-splice_match	NR3C1	ENST00000231509.7	3556	9	-17	117214	-6	2028	3prime_fragment	FALSE	canonical	1	185341	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	510	1697	95.0	-21	True	NA	NA
PB.10852.2	chr7	-	3034	5	novel_not_in_catalog	CHCHD3	novel	1598	8	NA	NA	-22	25381	any annotated donor/acceptor	FALSE	canonical	1	3809	junction_1	122221.55967417327	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	174	584	40.0	-24	True	ATTAAA	-16
PB.7989.3	chr3	+	2749	15	full-splice_match	RBMS3	ENST00000434693.6	8540	15	333	5458	-31	-196	multi-exon	FALSE	canonical	1	27144	junction_1	18526.879772979824	NA	6	NA	TRUE	NA	NA	NA	C	coding	436	1311	368	1678	95.0	-3570	False	ATTAAA	-43
PB.7989.1	chr3	+	2980	13	novel_in_catalog	AC098650.1	novel	3535	14	NA	NA	931810	237396	intron_retention	TRUE	canonical	1	24708	junction_9	18120.34120968906	NA	9	NA	TRUE	NA	NA	NA	A	coding	404	1215	695	1909	95.0	-3897	False	ATTAAA	-43
PB.10530.15	chr7	-	2705	11	novel_not_in_catalog	MYO1G	novel	3033	21	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1569	junction_1	192112.875916634	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	52	1725	90.0	2	True	NA	NA
PB.7989.4	chr3	+	2120	14	full-splice_match	RBMS3	ENST00000452462.5	1547	14	-481	-92	-2	29	multi-exon	FALSE	canonical	1	43166	junction_11	12985.829342632544	NA	4	NA	TRUE	NA	NA	NA	C	coding	421	1266	612	1877	70.0	0	True	ATTAAA	-13
PB.7989.5	chr3	+	2773	14	full-splice_match	RBMS3	ENST00000452462.5	1547	14	-306	-920	-100	-196	multi-exon	FALSE	canonical	1	43166	junction_11	12985.829342632544	NA	6	NA	TRUE	NA	NA	NA	C	coding	421	1266	437	1702	95.0	-3639	False	ATTAAA	-43
PB.10188.1	chr6	+	2384	4	full-splice_match	ASF1A	ENST00000229595.5	2362	4	54	-76	53	76	multi-exon	FALSE	canonical	1	525336	junction_1	41046.357794842435	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	141	755	40.0	-18	False	AATAAA	-21
PB.10188.2	chr6	+	2353	4	full-splice_match	ASF1A	ENST00000229595.5	2362	4	-42	51	-42	-51	multi-exon	FALSE	canonical	1	525336	junction_1	41046.357794842435	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	237	851	70.0	-42	True	TATAAA	-28
PB.6751.1	chr2	-	5051	13	novel_not_in_catalog	NCKAP5	novel	7594	20	NA	NA	95711	-49154	any annotated donor/acceptor	FALSE	canonical	1	685	junction_3	10005.379564125602	NA	0	NA	TRUE	NA	NA	NA	B	coding	1639	4917	135	5051	70.0	-11	True	NA	NA
PB.6751.2	chr2	-	4713	12	novel_not_in_catalog	NCKAP5	novel	7594	20	NA	NA	95705	-50214	any annotated donor/acceptor	FALSE	canonical	1	4558	junction_11	8130.750574768046	NA	0	NA	TRUE	NA	NA	NA	B	coding	1524	4572	141	4712	80.0	-17	True	ACTAAA	-6
PB.11343.12	chr8	-	3049	1	novel_in_catalog	FAM49B	novel	3798	12	NA	NA	-2	-33764	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	37	True	NA	NA
PB.848.6	chr1	+	1695	4	full-splice_match	PEA15	ENST00000360472.8	2471	4	47	729	4	612	multi-exon	FALSE	canonical	1	1933448	junction_1	651201.4241159695	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	142	534	10.0	0	True	ATTAAA	-21
PB.11351.1	chr8	+	2440	3	novel_not_in_catalog	LINC02055	novel	907	6	NA	NA	-12	-29383	any annotated donor/acceptor	FALSE	canonical	1	303	junction_2	4954.5	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	NA	False	AATAAA	-7
PB.1585.20	chr10	-	1461	3	incomplete-splice_match	HPS1	ENST00000480020.5	795	7	-73	11452	-8	365	3prime_fragment	FALSE	canonical	1	314960	junction_2	107192.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-21	True	NA	NA
PB.933.11	chr1	+	2578	8	full-splice_match	METTL13	ENST00000361735.3	3327	8	-7	756	-1	58	multi-exon	FALSE	canonical	1	238718	junction_2	67253.56330321534	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	274	2373	5.0	21	True	AATAAA	-33
PB.933.10	chr1	+	3334	8	full-splice_match	METTL13	ENST00000361735.3	3327	8	-12	5	-6	-5	multi-exon	FALSE	canonical	1	238718	junction_2	67253.56330321534	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	279	2378	25.0	16	True	ATTAAA	-12
PB.8863.2	chr4	+	2660	13	novel_not_in_catalog	GPAT3	novel	442	3	NA	NA	-31	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	42460.41848069276	NA	2	1	TRUE	NA	NA	NA	C	coding	434	1305	251	1555	25.0	1	True	AATAAA	-13
PB.5971.1	chr19	+	3813	9	incomplete-splice_match	SIPA1L3	ENST00000222345.10	7987	22	-20	88074	-20	805	3prime_fragment	FALSE	canonical	1	45415	junction_1	57726.91214676219	NA	0	NA	TRUE	NA	NA	NA	A	coding	963	2892	530	3421	90.0	0	True	NA	NA
PB.7091.4	chr2	+	4698	10	full-splice_match	UBE2F	ENST00000272930.8	2009	10	74	-2763	1	2576	multi-exon	FALSE	canonical	1	130839	junction_5	119002.11511544917	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	121	678	20.0	15	True	ATTAAA	-16
PB.7091.5	chr2	+	1941	10	full-splice_match	UBE2F	ENST00000272930.8	2009	10	68	0	-3	0	multi-exon	FALSE	canonical	1	130839	junction_5	119002.11511544917	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	127	684	15.0	9	True	AATAAA	-17
PB.7091.6	chr2	+	891	10	full-splice_match	UBE2F	ENST00000272930.8	2009	10	69	1049	-2	1	multi-exon	FALSE	canonical	1	130839	junction_5	119002.11511544917	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	126	683	15.0	10	True	CATAAA	-18
PB.7091.7	chr2	+	4821	10	full-splice_match	UBE2F	ENST00000612130.4	2135	10	21	-2707	21	2707	multi-exon	FALSE	canonical	1	4072	junction_1	137331.8701044847	NA	1	NA	TRUE	NA	NA	NA	C	coding	185	558	113	670	20.0	2	True	AATAAA	-17
PB.9351.1	chr5	+	2173	8	full-splice_match	ARSK	ENST00000380009.8	3354	8	22	1159	22	225	multi-exon	FALSE	canonical	1	46817	junction_1	11969.56706120372	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	184	1794	85.0	-5	True	NA	NA
PB.7091.1	chr2	+	1411	10	full-splice_match	UBE2F	ENST00000272930.8	2009	10	56	542	-3	120	multi-exon	FALSE	canonical	1	130839	junction_5	119002.11511544917	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	139	696	30.0	-3	True	AATACA	-18
PB.7091.2	chr2	+	1288	10	full-splice_match	UBE2F	ENST00000272930.8	2009	10	57	664	-2	-2	multi-exon	FALSE	canonical	1	130839	junction_5	119002.11511544917	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	138	695	35.0	-2	True	NA	NA
PB.9351.2	chr5	+	3326	8	full-splice_match	ARSK	ENST00000380009.8	3354	8	27	1	27	-1	multi-exon	FALSE	canonical	1	46817	junction_1	11969.56706120372	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	179	1789	15.0	0	True	NA	NA
PB.10264.1	chr6	+	2164	3	novel_in_catalog	AL356599.1	novel	268	3	NA	NA	10	1062	no_combination_of_known_junctions	FALSE	canonical	1	2732	junction_2	7878.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-12	True	AATAAA	-30
PB.10015.9	chr6	+	2658	13	novel_not_in_catalog	HSP90AB1	novel	2644	12	NA	NA	12	-1	any annotated donor/acceptor	FALSE	canonical	1	2685	junction_1	2708108.699774023	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	200	2374	10.0	-2	True	AATAAA	-20
PB.10015.8	chr6	+	2666	11	incomplete-splice_match	HSP90AB1	ENST00000371646.9	2572	12	12	4	12	-1	intron_retention	FALSE	canonical	1	1694090	junction_7	2487044.4767913097	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	98	2170	10.0	-2	True	AATAAA	-20
PB.2874.16	chr12	-	1797	15	incomplete-splice_match	SART3	ENST00000228284.7	4004	19	215	7700	-6	-57	3prime_fragment	FALSE	canonical	1	303792	junction_12	73436.83790252988	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1776	21	1796	60.0	-7	True	NA	NA
PB.10015.6	chr6	+	1819	11	novel_not_in_catalog	HSP90AB1	novel	2644	12	NA	NA	10	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	2733583.8896074947	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	100	1644	10.0	-4	True	AATAAA	-20
PB.10015.5	chr6	+	2475	13	novel_not_in_catalog	HSP90AB1	novel	2644	12	NA	NA	10	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	3053522.683840869	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	100	1605	10.0	-4	True	AATAAA	-17
PB.2874.15	chr12	-	3518	19	full-splice_match	SART3	ENST00000228284.7	4004	19	215	271	-6	-143	multi-exon	FALSE	canonical	1	303792	junction_16	82077.47537337309	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	21	2912	25.0	-7	True	NA	NA
PB.2874.12	chr12	-	4148	18	novel_in_catalog	SART3	novel	4004	19	NA	NA	-5	19	intron_retention	FALSE	canonical	1	303792	junction_15	83348.11086327938	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	1911	3380	30.0	-6	True	ATTAAA	-15
PB.2874.13	chr12	-	3377	19	novel_in_catalog	SART3	novel	4004	19	NA	NA	0	19	combination_of_known_junctions	FALSE	canonical	1	52	junction_18	131427.84223681333	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	114	2609	30.0	2372	False	ATTAAA	-15
PB.2874.10	chr12	-	3973	19	novel_in_catalog	SART3	novel	4004	19	NA	NA	-13	19	combination_of_known_junctions	FALSE	canonical	1	60374	junction_15	121715.58254024466	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	260	3205	30.0	1855	False	ATTAAA	-15
PB.2874.11	chr12	-	3680	19	full-splice_match	SART3	ENST00000228284.7	4004	19	216	108	-5	20	multi-exon	FALSE	canonical	1	303792	junction_16	82077.47537337309	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	20	2911	30.0	-6	True	ATTAAA	-16
PB.11032.19	chr8	-	2195	10	full-splice_match	TNFRSF10B	ENST00000347739.3	1723	10	-60	-412	-50	412	multi-exon	FALSE	canonical	1	274127	junction_5	155011.8542055636	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	188	1423	35.0	5689	False	AGTAAA	-15
PB.6126.3	chr19	+	2767	14	novel_not_in_catalog	NUCB1	novel	2668	13	NA	NA	-8	1291	intron_retention	FALSE	non_canonical	0	0	junction_13	726492.2161927075	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	73	1458	80.0	-24	True	NA	NA
PB.8286.3	chr3	-	1599	11	full-splice_match	IFT57	ENST00000264538.3	3203	11	146	1458	11	-1458	multi-exon	FALSE	canonical	1	428327	junction_10	81243.0421441738	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	103	1392	40.0	-16	True	AATAAA	-24
PB.10176.4	chr6	-	3928	1	full-splice_match	TSPYL4	ENST00000420283.2	4180	1	31	221	31	-221	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	414	1245	102	1346	60.0	5079	False	NA	NA
PB.10176.3	chr6	-	2411	2	intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	10854	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	414	1245	103	1347	75.0	5078	False	AATAAA	-30
PB.10176.2	chr6	-	2486	2	intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	20868	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	414	1245	99	1343	75.0	5082	False	AATAAA	-30
PB.10176.1	chr6	-	4103	1	full-splice_match	TSPYL4	ENST00000420283.2	4180	1	50	27	50	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	414	1245	83	1327	75.0	-16	True	AATAAA	-30
PB.1049.8	chr1	+	6943	15	incomplete-splice_match	ATP2B4	ENST00000357681.9	8968	21	75481	3	19233	-1	5prime_fragment	FALSE	canonical	1	311307	junction_2	72503.43517199578	NA	3	NA	TRUE	NA	NA	NA	C	coding	836	2511	209	2719	20.0	-9022	False	AATAAA	-17
PB.9625.1	chr5	-	4330	4	full-splice_match	STC2	ENST00000265087.8	5353	4	1021	2	-35	-2	multi-exon	FALSE	canonical	1	589085	junction_3	143303.54223349356	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	290	1198	20.0	1082	False	AATAAA	-26
PB.9625.3	chr5	-	3544	4	full-splice_match	STC2	ENST00000265087.8	5353	4	1089	720	33	-720	multi-exon	FALSE	canonical	1	589085	junction_3	143303.54223349356	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	222	1130	15.0	-1	True	CATAAA	-34
PB.9625.2	chr5	-	5374	4	full-splice_match	STC2	ENST00000265087.8	5353	4	-31	10	-31	-10	multi-exon	FALSE	canonical	1	589085	junction_3	143303.54223349356	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	1342	2250	20.0	30	False	AATAAA	-18
PB.9625.5	chr5	-	3057	4	full-splice_match	STC2	ENST00000265087.8	5353	4	-63	2359	-63	1106	multi-exon	FALSE	canonical	1	589085	junction_3	143303.54223349356	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	1374	2282	45.0	-2	True	AATAAA	-9
PB.9625.4	chr5	-	1940	4	full-splice_match	STC2	ENST00000265087.8	5353	4	1056	2357	0	1108	multi-exon	FALSE	canonical	1	589085	junction_3	143303.54223349356	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	255	1163	40.0	-1	True	AATAAA	-11
PB.322.4	chr1	+	3392	12	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	-42	-5	any annotated donor/acceptor	FALSE	canonical	1	8349	junction_2	253444.01423950557	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	436	1209	15.0	0	True	ATTAAA	-19
PB.9258.9	chr5	+	6542	27	novel_in_catalog	ERBIN	novel	8647	26	NA	NA	-38	-2	combination_of_known_junctions	FALSE	canonical	1	18783	junction_22	158576.76426787322	NA	3	1	TRUE	NA	NA	NA	C	coding	1460	4383	176	4558	15.0	-1	True	AAAAAG	-25
PB.9698.1	chr6	+	2524	1	incomplete-splice_match	LINC01011	ENST00000445000.2	2811	2	676	7	-5	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	155	468	307	774	10.0	-14	True	NA	NA
PB.9511.2	chr5	+	4346	1	full-splice_match	PCDHB8	ENST00000239444.3	2740	1	8	-1614	8	1614	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	801	2406	238	2643	25.0	-9363	False	ATTAAA	-14
PB.322.6	chr1	+	3153	11	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	-18	-5	any annotated donor/acceptor	FALSE	canonical	1	1786	junction_7	243917.95938800817	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	412	1047	15.0	-18	True	ATTAAA	-19
PB.151.1	chr1	+	1209	1	antisense	novelGene_USP48_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-5898	False	NA	NA
PB.8286.2	chr3	-	3307	10	novel_in_catalog	IFT57	novel	3203	11	NA	NA	4	-1458	intron_retention	FALSE	canonical	1	428327	junction_9	85444.86510415161	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	110	1210	40.0	-23	True	AATAAA	-24
PB.1049.4	chr1	+	8355	21	full-splice_match	ATP2B4	ENST00000357681.9	8968	21	234	379	8	-377	multi-exon	FALSE	canonical	1	293508	junction_1	77503.12527304947	NA	3	NA	TRUE	NA	NA	NA	C	coding	1205	3618	890	4507	80.0	0	True	NA	NA
PB.9258.1	chr5	+	6314	25	full-splice_match	ERBIN	ENST00000380943.6	6410	25	94	2	40	-2	multi-exon	FALSE	canonical	1	244303	junction_21	107339.58054127118	NA	1	NA	TRUE	NA	NA	NA	C	coding	1371	4116	215	4330	15.0	-3	True	AAAAAG	-25
PB.9258.3	chr5	+	1825	18	incomplete-splice_match	ERBIN	ENST00000506030.5	4386	26	-92	32173	-46	20415	3prime_fragment	FALSE	canonical	1	283962	junction_4	68296.93627314169	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1641	184	1824	65.0	-9	True	AGTAAA	-15
PB.9258.2	chr5	+	6088	24	full-splice_match	ERBIN	ENST00000380935.5	6692	24	88	516	52	-9	multi-exon	FALSE	canonical	1	112110	junction_21	120696.77867523412	NA	0	NA	TRUE	NA	NA	NA	C	coding	1302	3909	203	4111	25.0	9	True	AAAAAG	-18
PB.9258.5	chr5	+	2077	19	incomplete-splice_match	ERBIN	ENST00000506030.5	4386	26	-92	29793	-46	22795	3prime_fragment	FALSE	canonical	1	283962	junction_4	77621.25581795345	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1893	184	2076	50.0	-9	True	NA	NA
PB.9258.4	chr5	+	5704	25	full-splice_match	ERBIN	ENST00000380943.6	6410	25	141	565	-30	-565	multi-exon	FALSE	canonical	1	244303	junction_21	107339.58054127118	NA	1	NA	TRUE	NA	NA	NA	C	coding	1371	4116	168	4283	35.0	7	True	AATAAA	-22
PB.9258.7	chr5	+	7142	24	novel_in_catalog	ERBIN	novel	8647	26	NA	NA	-706	-7	no_combination_of_known_junctions	FALSE	canonical	1	8860	junction_1	136879.92262697525	NA	2	NA	TRUE	NA	NA	NA	C	coding	1371	4116	1048	5163	25.0	-11	True	AAAAAG	-20
PB.3454.8	chr14	-	2982	20	full-splice_match	DLGAP5	ENST00000395425.6	2954	20	-45	17	19	7	multi-exon	FALSE	canonical	1	93294	junction_2	112107.15772204394	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	129	2657	30.0	-5	True	AATAAA	-19
PB.7618.13	chr22	+	2083	7	novel_in_catalog	TANGO2	novel	745	5	NA	NA	3	0	intron_retention	FALSE	canonical	1	26890	junction_4	104661.21578600908	NA	1	NA	TRUE	NA	NA	NA	C	coding	214	645	176	820	10.0	-1	True	AATAAA	-23
PB.7618.12	chr22	+	2282	8	full-splice_match	TANGO2	ENST00000399807.7	2241	8	22	-63	3	0	multi-exon	FALSE	canonical	1	26772	junction_1	99638.79302167568	NA	3	1	TRUE	NA	NA	NA	C	coding	178	537	483	1019	10.0	-1	True	AATAAA	-23
PB.7618.11	chr22	+	2747	1	novel_in_catalog	TANGO2	novel	745	5	NA	NA	3	-24323	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	115	348	1	348	85.0	-1	True	NA	NA
PB.7618.10	chr22	+	3027	5	incomplete-splice_match	TANGO2	ENST00000411907.5	568	6	42	3015	3	2400	3prime_fragment	FALSE	canonical	1	26772	junction_1	114805.11339439546	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	503	1399	90.0	-1	True	NA	NA
PB.7618.16	chr22	+	2262	9	novel_not_in_catalog	TANGO2	novel	745	5	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	3331	junction_6	95956.70689357453	NA	5	NA	TRUE	NA	NA	NA	C	coding	210	633	136	768	10.0	-10	False	AATAAA	-22
PB.7618.15	chr22	+	2315	8	novel_in_catalog	TANGO2	novel	745	5	NA	NA	-4	0	intron_retention	FALSE	canonical	1	18970	junction_6	102254.77715001877	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	253	885	10.0	-10	False	AATAAA	-23
PB.7618.14	chr22	+	2151	8	novel_in_catalog	TANGO2	novel	745	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	59277	junction_1	88028.21135596596	NA	4	NA	TRUE	NA	NA	NA	C	coding	178	537	352	888	10.0	2	True	AATAAA	-23
PB.1763.2	chr11	-	2898	1	full-splice_match	KCNQ1OT1	ENST00000597346.1	91667	1	-2	88771	-2	-88771	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	73	222	431	652	60.0	-4	True	NA	NA
PB.7594.4	chr22	-	1238	8	full-splice_match	ATP6V1E1	ENST00000399796.6	1208	8	-22	-8	-20	8	multi-exon	FALSE	canonical	1	6985	junction_4	443350.789908821	NA	5	1	TRUE	NA	NA	NA	C	coding	196	591	135	725	25.0	-23	True	ATTAAA	-22
PB.5780.1	chr19	+	2893	3	full-splice_match	AC022098.1	ENST00000588387.1	2861	3	-31	-1	-31	1	multi-exon	FALSE	canonical	1	7401	junction_2	17182.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	105	318	1	318	25.0	-20	True	NA	NA
PB.1763.1	chr11	-	3068	1	full-splice_match	KCNQ1OT1	ENST00000597346.1	91667	1	-53	88652	-53	-88652	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	73	222	482	703	70.0	-43	False	NA	NA
PB.1049.3	chr1	+	8429	21	full-splice_match	ATP2B4	ENST00000357681.9	8968	21	537	2	311	0	multi-exon	FALSE	canonical	1	293508	junction_1	77503.12527304947	NA	3	NA	TRUE	NA	NA	NA	C	coding	1205	3618	587	4204	20.0	-7	True	AATAAA	-18
PB.3027.19	chr12	-	3102	14	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	-30	3	any annotated donor/acceptor	FALSE	canonical	1	4411	junction_13	229035.7502554501	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	366	2990	25.0	2	True	ATTAAA	-16
PB.3027.18	chr12	-	3817	12	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-32	14	intron_retention	FALSE	canonical	1	199099	junction_11	173150.2899028891	NA	2	NA	TRUE	NA	NA	NA	C	coding	568	1707	48	1754	50.0	0	True	ATTAAA	-27
PB.10891.3	chr7	+	3322	1	novel_in_catalog	SSBP1	novel	687	7	NA	NA	0	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	2	9	393	401	70.0	-14	True	AATATA	-16
PB.3027.16	chr12	-	3085	14	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	35	416	any annotated donor/acceptor	FALSE	canonical	1	19627	junction_1	206653.5754447396	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	56	2872	25.0	236	False	CATAAA	-12
PB.3027.15	chr12	-	3142	12	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-32	434	combination_of_known_junctions	FALSE	canonical	1	21652	junction_2	209075.61979693154	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	48	2090	20.0	0	True	CATAAA	-30
PB.3027.14	chr12	-	3862	14	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	-32	434	any annotated donor/acceptor	FALSE	canonical	1	4411	junction_13	229035.7502554501	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	368	2992	20.0	0	True	CATAAA	-30
PB.3027.13	chr12	-	3729	13	full-splice_match	ANKLE2	ENST00000357997.9	4646	13	56	861	-19	442	multi-exon	FALSE	canonical	1	199099	junction_12	166418.7533713899	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	35	2851	15.0	-1	True	CATAAA	-38
PB.3027.12	chr12	-	4554	12	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-14	442	intron_retention	FALSE	canonical	1	199099	junction_11	173150.2899028891	NA	1	1	TRUE	NA	NA	NA	C	coding	568	1707	30	1736	15.0	4	True	CATAAA	-38
PB.10891.5	chr7	+	2688	2	full-splice_match	SSBP1	ENST00000461433.1	1694	2	-29	-965	7	-11	multi-exon	FALSE	canonical	1	507288	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	AATATA	-16
PB.10891.4	chr7	+	1659	7	novel_not_in_catalog	SSBP1	novel	687	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	1183025.571588797	NA	1	1	TRUE	NA	NA	NA	C	coding	159	480	97	576	45.0	-14	True	ATTAAA	-14
PB.11453.2	chr9	+	2766	14	incomplete-splice_match	KDM4C	ENST00000543771.5	3332	18	-170	62926	-130	0	3prime_fragment	FALSE	canonical	1	127091	junction_11	19937.337364141622	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	249	2543	25.0	0	True	TATAAA	-19
PB.11453.3	chr9	+	4347	23	novel_in_catalog	KDM4C	novel	3406	18	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	1	25174	junction_18	45261.80906609843	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	160	3429	10.0	-6	True	AATAAA	-17
PB.1289.19	chr10	+	2103	12	incomplete-splice_match	CELF2	ENST00000416382.6	6894	13	160163	4673	0	391	5prime_fragment	FALSE	canonical	1	135199	junction_9	99274.63354754829	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	22	1476	15.0	0	True	AAGAAA	-26
PB.1289.18	chr10	+	2348	13	incomplete-splice_match	CELF2	ENST00000631460.1	5538	14	160160	3075	0	6	5prime_fragment	FALSE	canonical	1	135199	junction_9	101071.91293012201	NA	1	1	TRUE	NA	NA	NA	C	coding	484	1455	22	1476	75.0	0	True	NA	NA
PB.11453.6	chr9	+	4291	18	full-splice_match	KDM4C	ENST00000543771.5	3332	18	-143	-816	-103	816	multi-exon	FALSE	canonical	1	14876	junction_17	39217.55768419042	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	222	2663	25.0	0	True	ATTAAA	-17
PB.11453.7	chr9	+	4155	21	novel_in_catalog	KDM4C	novel	3406	18	NA	NA	-57	-1	no_combination_of_known_junctions	FALSE	canonical	1	8346	junction_16	41035.255658122805	NA	1	NA	TRUE	NA	NA	NA	C	coding	810	2433	176	2608	10.0	-22	True	AATAAA	-17
PB.11453.4	chr9	+	3406	17	novel_in_catalog	KDM4C	novel	3406	18	NA	NA	-144	-1	no_combination_of_known_junctions	FALSE	canonical	1	3252	junction_16	42574.62578226613	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	263	2644	20.0	-14	True	ATTAAA	-17
PB.11453.5	chr9	+	3500	18	full-splice_match	KDM4C	ENST00000543771.5	3332	18	-171	3	-131	-3	multi-exon	FALSE	canonical	1	14876	junction_17	39217.55768419042	NA	1	NA	TRUE	NA	NA	NA	C	coding	813	2442	250	2691	15.0	-1	True	ATTAAA	-15
PB.1289.13	chr10	+	3730	12	incomplete-splice_match	CELF2	ENST00000399850.7	7085	13	447	3076	-7	5	5prime_fragment	FALSE	canonical	1	40597	junction_9	119410.48863389314	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	29	1501	80.0	-7	True	NA	NA
PB.1289.12	chr10	+	2219	12	incomplete-splice_match	CELF2	ENST00000416382.6	6894	13	160163	4557	0	507	5prime_fragment	FALSE	canonical	1	135199	junction_9	99274.63354754829	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	22	1476	30.0	0	True	AATAAA	-9
PB.1289.11	chr10	+	3347	4	incomplete-splice_match	CELF2	ENST00000354897.3	1754	13	-43	68567	-41	-54077	3prime_fragment	FALSE	canonical	1	422183	junction_3	35785.25768463258	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	63	548	85.0	0	True	NA	NA
PB.1289.10	chr10	+	2469	13	novel_in_catalog	CELF2	novel	2724	15	NA	NA	-41	540	combination_of_known_junctions	FALSE	canonical	1	117164	junction_1	114506.76710967663	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	239	1693	65.0	2	True	AATAAA	-42
PB.1289.17	chr10	+	3222	3	incomplete-splice_match	CELF2	ENST00000609870.5	1549	10	0	68578	0	-54078	3prime_fragment	FALSE	canonical	1	19842	junction_1	201170.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.1289.16	chr10	+	3317	13	novel_not_in_catalog	CELF2	novel	2724	15	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	6153	junction_12	134058.316913656	NA	2	NA	TRUE	NA	NA	NA	C	coding	484	1455	22	1476	15.0	0	True	ATTAAA	-11
PB.1289.15	chr10	+	3625	11	novel_in_catalog	CELF2	novel	2724	15	NA	NA	0	5	intron_retention	FALSE	canonical	1	94465	junction_4	128570.77995753934	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	554	1396	80.0	0	True	NA	NA
PB.1289.14	chr10	+	3705	12	incomplete-splice_match	CELF2	ENST00000416382.6	6894	13	160163	3071	0	5	5prime_fragment	FALSE	canonical	1	135199	junction_9	99274.63354754829	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	22	1476	80.0	0	True	NA	NA
PB.12051.1	chrX	-	5288	5	novel_not_in_catalog	ZNF41	novel	4297	5	NA	NA	-253	1013	any annotated donor/acceptor	FALSE	canonical	1	18417	junction_4	31817.63734550383	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	385	2724	25.0	9	True	NA	NA
PB.9356.11	chr5	-	3364	20	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	-10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	98333.39065679033	NA	1	NA	TRUE	NA	NA	NA	C	coding	929	2790	127	2916	35.0	12	True	AATAAA	-19
PB.12051.3	chrX	-	3698	5	full-splice_match	ZNF41	ENST00000377065.8	4531	5	18	815	18	-815	multi-exon	FALSE	canonical	1	99	junction_4	37774.27823929929	NA	2	NA	TRUE	NA	NA	NA	C	coding	779	2340	623	2962	30.0	280	False	TATAAA	-4
PB.12051.2	chrX	-	4991	5	novel_not_in_catalog	ZNF41	novel	4297	5	NA	NA	-263	706	any annotated donor/acceptor	FALSE	canonical	1	18417	junction_4	31817.63734550383	NA	1	NA	TRUE	NA	NA	NA	C	coding	779	2340	395	2734	30.0	-1	True	NA	NA
PB.12051.5	chrX	-	3490	5	full-splice_match	ZNF41	ENST00000313116.11	4297	5	-16	823	-16	-823	multi-exon	FALSE	canonical	1	5127	junction_4	36063.609601646924	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	423	2762	30.0	-25	True	AATATA	-22
PB.12051.4	chrX	-	3332	5	novel_not_in_catalog	ZNF41	novel	4297	5	NA	NA	-234	-821	any annotated donor/acceptor	FALSE	canonical	1	600	junction_4	42192.32455302149	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	257	2602	30.0	28	True	AATATA	-24
PB.12051.7	chrX	-	3471	5	novel_not_in_catalog	ZNF41	novel	4297	5	NA	NA	-258	-825	any annotated donor/acceptor	FALSE	canonical	1	7546	junction_3	37879.48471468428	NA	11	NA	TRUE	NA	NA	NA	C	coding	781	2346	400	2745	35.0	4	True	AATATA	-20
PB.12051.6	chrX	-	3411	5	novel_not_in_catalog	ZNF41	novel	4297	5	NA	NA	-288	-825	any annotated donor/acceptor	FALSE	canonical	1	7546	junction_3	40312.839635778575	NA	3	NA	TRUE	NA	NA	NA	C	coding	781	2346	340	2685	35.0	-26	True	AATATA	-20
PB.9356.18	chr5	-	3983	19	full-splice_match	ERAP1	ENST00000443439.6	4805	19	-23	845	-10	588	multi-exon	FALSE	canonical	1	248175	junction_18	55867.291706400305	NA	2	NA	TRUE	NA	NA	NA	C	coding	929	2790	127	2916	50.0	12	True	AATAAA	-16
PB.9356.19	chr5	-	3195	19	full-splice_match	ERAP1	ENST00000443439.6	4805	19	-30	1640	-17	-207	multi-exon	FALSE	canonical	1	248175	junction_18	55867.291706400305	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	134	2923	30.0	5	True	AATAAA	-17
PB.9631.1	chr5	-	2058	1	antisense	novelGene_SIMC1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.11625.40	chr9	-	2595	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	-156	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	837804.5437126092	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	210	1598	55.0	-13	True	AATATA	-33
PB.11606.3	chr9	+	2703	2	novel_not_in_catalog	ANXA1	novel	1509	13	NA	NA	18	-2226	intron_retention	TRUE	canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-9030	False	NA	NA
PB.11663.5	chr9	+	2855	1	novel_in_catalog	C9orf3	novel	1966	8	NA	NA	10	-33835	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	136	411	1	411	95.0	4	True	NA	NA
PB.6802.40	chr2	-	4468	14	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-46	59289	-7	9175	3prime_fragment	FALSE	canonical	1	81987	junction_13	41951.524282171595	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	75	2282	30.0	-1	True	AATAAA	-26
PB.11663.6	chr9	+	3782	8	full-splice_match	C9orf3	ENST00000277198.6	1966	8	22	-1838	11	0	multi-exon	FALSE	canonical	1	13295	junction_7	11087.014964196924	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	165	1865	25.0	5	True	AATAAA	-14
PB.5329.8	chr17	-	2662	10	novel_in_catalog	P4HB	novel	2603	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	5402503	junction_9	1525551.9813819018	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	156	1796	5.0	9341	False	AATAAA	-19
PB.11663.3	chr9	+	3000	16	novel_in_catalog	C9orf3	novel	1966	8	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	15514	junction_11	112852.2999115806	NA	24	3	TRUE	NA	NA	NA	C	coding	859	2580	205	2784	25.0	-35	True	AATAAA	-22
PB.6802.41	chr2	-	4074	14	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-38	59675	1	8789	3prime_fragment	FALSE	canonical	1	81987	junction_13	41951.524282171595	NA	2	1	TRUE	NA	NA	NA	C	coding	735	2208	67	2274	80.0	7	True	NA	NA
PB.1669.11	chr10	-	3583	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	27	6089	27	944	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3369	214	3582	50.0	-1	True	NA	NA
PB.1669.10	chr10	-	3870	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	25	5804	25	1229	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1154	3465	216	3680	20.0	-3	True	AGTAAA	-34
PB.1669.13	chr10	-	2624	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	-5	7080	-5	-47	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2379	246	2624	55.0	21	False	NA	NA
PB.1669.12	chr10	-	3015	5	full-splice_match	PDZD8	ENST00000334464.6	9699	5	34	6650	34	383	multi-exon	FALSE	canonical	1	200943	junction_2	44272.44991244555	NA	0	NA	TRUE	NA	NA	NA	C	coding	936	2808	207	3014	35.0	6	True	AATAAA	-20
PB.1669.14	chr10	-	2530	4	novel_in_catalog	PDZD8	novel	9699	5	NA	NA	15	2	no_combination_of_known_junctions	FALSE	canonical	1	32672	junction_3	95464.65703541225	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2304	226	2529	65.0	-13	True	NA	NA
PB.5329.3	chr17	-	2485	11	full-splice_match	P4HB	ENST00000331483.8	2603	11	116	2	-5	0	multi-exon	FALSE	canonical	1	5402503	junction_10	1477397.3039087218	NA	6	NA	TRUE	NA	NA	NA	C	coding	508	1527	108	1634	5.0	9389	False	AATAAA	-18
PB.6802.43	chr2	-	3553	2	full-splice_match	LY75	ENST00000492955.1	1402	2	-7	-2144	-7	2144	multi-exon	FALSE	canonical	1	22116	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	NA	NA
PB.9002.19	chr4	-	2294	19	incomplete-splice_match	INPP4B	ENST00000262992.8	3741	24	57444	58153	-49	0	internal_fragment	FALSE	canonical	1	71468	junction_8	32463.54649658294	NA	0	NA	TRUE	NA	NA	NA	B	coding	630	1890	405	2294	70.0	549	False	TTTAAA	-38
PB.6893.1	chr2	-	3896	8	full-splice_match	TFPI	ENST00000233156.8	3885	8	17	-28	-14	-3	multi-exon	FALSE	canonical	1	332607	junction_7	135186.88182282922	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	291	1193	20.0	6	True	AGTAAA	-21
PB.11718.4	chr9	+	3542	1	genic	DNAJC25_DNAJC25-GNG10	novel	NA	NA	NA	NA	-29	-19481	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	179	540	86	625	75.0	-11	True	AAAAAG	-29
PB.8023.1	chr3	-	2660	1	antisense	novelGene_ACVR2B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	100	303	1176	1478	100.0	NA	False	NA	NA
PB.11718.2	chr9	+	2547	5	full-splice_match	DNAJC25	ENST00000447096.1	2498	5	-52	3	-44	3	multi-exon	FALSE	canonical	1	30563	junction_1	85372.10485976962	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	705	1421	25.0	-26	True	AATAAA	-18
PB.11718.3	chr9	+	1733	5	full-splice_match	DNAJC25	ENST00000447096.1	2498	5	-42	807	-34	-801	multi-exon	FALSE	canonical	1	30563	junction_1	85372.10485976962	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	695	1411	15.0	-16	True	TTTAAA	-7
PB.6802.45	chr2	-	3451	2	full-splice_match	LY75	ENST00000492955.1	1402	2	-9	-2040	-9	2040	multi-exon	FALSE	canonical	1	22116	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-3	True	NA	NA
PB.1862.1	chr11	-	2249	4	full-splice_match	SVIP	ENST00000354193.4	4541	4	31	2261	31	1557	multi-exon	FALSE	canonical	1	589113	junction_3	51853.534770758124	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	2	304	70.0	-1	True	NA	NA
PB.1862.2	chr11	-	1390	4	full-splice_match	SVIP	ENST00000354193.4	4541	4	25	3126	25	692	multi-exon	FALSE	canonical	1	589113	junction_3	51853.534770758124	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	2	310	25.0	-7	True	AATAAA	-19
PB.1862.3	chr11	-	2572	1	novel_in_catalog	SVIP	novel	4541	4	NA	NA	10	-39	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-22	False	NA	NA
PB.9125.2	chr5	-	3505	8	novel_not_in_catalog	SDHAP3	novel	728	6	NA	NA	134	243	any annotated donor/acceptor	FALSE	canonical	1	17225	junction_4	35596.622425764624	NA	0	NA	TRUE	NA	NA	NA	B	coding	332	999	1591	2589	70.0	-7	True	GATAAA	-17
PB.6802.46	chr2	-	4002	1	genic	LY75_LY75-CD302	novel	NA	NA	NA	NA	-7	1610	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	coding	80	243	75	317	20.0	-1	True	TTTAAA	-29
PB.9125.1	chr5	-	6800	7	novel_not_in_catalog	SDHAP3	novel	728	6	NA	NA	127	243	any annotated donor/acceptor	FALSE	canonical	1	36685	junction_3	31494.84915426648	NA	2	NA	TRUE	NA	NA	NA	B	coding	332	999	4886	5884	70.0	-14	True	GATAAA	-17
PB.10950.13	chr7	-	4092	16	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	-12	-1	no_combination_of_known_junctions	FALSE	canonical	1	11549	junction_13	81180.74285543339	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	354	1535	40.0	8	False	AATAAA	-16
PB.10950.12	chr7	-	4318	18	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	19209	junction_12	96253.84885498305	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	823	1761	40.0	0	True	AATAAA	-16
PB.10950.11	chr7	-	3932	13	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	5	11	combination_of_known_junctions	FALSE	canonical	1	11878	junction_3	89333.19627799654	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	211	1125	35.0	0	True	AATAAA	-28
PB.10950.10	chr7	-	4256	17	full-splice_match	LMBR1	ENST00000353442.9	7997	17	23	3718	1	11	multi-exon	FALSE	canonical	1	238822	junction_12	36885.78320280559	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	215	1687	35.0	-4	True	AATAAA	-28
PB.10950.17	chr7	-	4097	15	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	4225	junction_14	85471.05735276708	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	443	1546	40.0	3	True	AATAAA	-10
PB.10950.16	chr7	-	4120	17	novel_in_catalog	LMBR1	novel	1208	5	NA	NA	-38	-4	combination_of_known_junctions	FALSE	canonical	1	3244	junction_16	80287.15127432342	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	463	1566	40.0	575	False	AATAAA	-13
PB.10950.15	chr7	-	4053	16	full-splice_match	LMBR1	ENST00000359422.8	4727	16	29	645	0	-2	multi-exon	FALSE	canonical	1	41268	junction_1	69311.39253433658	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	187	1497	40.0	3	True	AATAAA	-15
PB.10950.14	chr7	-	3979	14	novel_not_in_catalog	LMBR1	novel	1208	5	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	116581.27077764327	NA	5	1	TRUE	NA	NA	NA	C	coding	415	1248	175	1422	40.0	5	True	AATAAA	-16
PB.10007.6	chr6	+	2954	11	full-splice_match	POLH	ENST00000372236.8	3540	11	29	557	29	-557	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	267	2408	65.0	-6	True	NA	NA
PB.10007.7	chr6	+	3247	11	full-splice_match	POLH	ENST00000372236.8	3540	11	30	263	30	-263	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	266	2407	50.0	-5	True	NA	NA
PB.10007.4	chr6	+	2372	11	full-splice_match	POLH	ENST00000372236.8	3540	11	28	1140	28	-1140	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	1	NA	TRUE	NA	NA	NA	C	coding	701	2103	268	2370	35.0	-7	True	AATAAA	-24
PB.10007.5	chr6	+	3500	11	full-splice_match	POLH	ENST00000372236.8	3540	11	28	12	28	-12	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	2	NA	TRUE	NA	NA	NA	C	coding	713	2142	268	2409	70.0	-7	True	AAAAAG	-31
PB.10007.2	chr6	+	2553	11	full-splice_match	POLH	ENST00000372236.8	3540	11	16	971	16	-971	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	280	2421	15.0	-19	True	AATACA	-16
PB.10007.3	chr6	+	3093	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	17	3443	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	279	2420	15.0	-18	True	AATAAA	-21
PB.10007.1	chr6	+	1997	11	full-splice_match	POLH	ENST00000372236.8	3540	11	6	1537	6	-1537	multi-exon	FALSE	canonical	1	134646	junction_1	38545.99070059038	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1707	290	1996	15.0	-29	True	NA	NA
PB.616.1	chr1	+	4893	6	full-splice_match	CTTNBP2NL	ENST00000271277.10	5897	6	70	934	70	-934	multi-exon	FALSE	canonical	1	82181	junction_1	33310.0667822807	NA	11	1	TRUE	NA	NA	NA	C	coding	639	1920	156	2075	20.0	1	True	ATTAAA	-15
PB.616.3	chr1	+	2952	6	full-splice_match	CTTNBP2NL	ENST00000271277.10	5897	6	35	2910	35	1948	multi-exon	FALSE	canonical	1	82181	junction_1	33310.0667822807	NA	1	NA	TRUE	NA	NA	NA	C	coding	639	1920	191	2110	35.0	2	True	TATAAA	-6
PB.616.2	chr1	+	5801	6	full-splice_match	CTTNBP2NL	ENST00000271277.10	5897	6	25	71	25	-71	multi-exon	FALSE	canonical	1	82181	junction_1	33310.0667822807	NA	5	NA	TRUE	NA	NA	NA	C	coding	639	1920	201	2120	25.0	-8	True	TATAAA	-16
PB.616.5	chr1	+	4273	6	full-splice_match	CTTNBP2NL	ENST00000271277.10	5897	6	52	1572	52	-1572	multi-exon	FALSE	canonical	1	82181	junction_1	33310.0667822807	NA	3	NA	TRUE	NA	NA	NA	C	coding	639	1920	174	2093	40.0	-273	False	AATAAA	-18
PB.616.4	chr1	+	3057	6	full-splice_match	CTTNBP2NL	ENST00000271277.10	5897	6	40	2800	40	2058	multi-exon	FALSE	canonical	1	82181	junction_1	33310.0667822807	NA	1	NA	TRUE	NA	NA	NA	C	coding	639	1920	186	2105	30.0	7	True	NA	NA
PB.10007.8	chr6	+	3160	12	novel_not_in_catalog	POLH	novel	3540	11	NA	NA	30	3443	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	63064.424333866584	NA	1	1	TRUE	NA	NA	NA	C	coding	713	2142	266	2407	15.0	-5	True	AATAAA	-21
PB.10007.9	chr6	+	2374	3	incomplete-splice_match	POLH	ENST00000372236.8	3540	11	30	30682	30	-2422	3prime_fragment	FALSE	canonical	1	134646	junction_1	8326.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	3	353	80.0	-5	True	NA	NA
PB.2872.2	chr12	-	5142	3	full-splice_match	CMKLR1	ENST00000412676.5	5110	3	-36	4	-36	-4	multi-exon	FALSE	canonical	1	8412	junction_2	22198.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	234	1349	20.0	-57	False	AATAAA	-12
PB.2872.3	chr12	-	3716	3	full-splice_match	CMKLR1	ENST00000412676.5	5110	3	-37	1431	-37	-1431	multi-exon	FALSE	canonical	1	8412	junction_2	22198.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	235	1350	10.0	-58	False	GATAAA	-22
PB.10186.4	chr6	+	3598	2	full-splice_match	PLN	ENST00000357525.5	2001	2	-2	-1595	-2	1595	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-2	True	AATAAA	-29
PB.2872.1	chr12	-	5070	4	novel_not_in_catalog	CMKLR1	novel	5110	3	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	24861.70348592836	NA	9	1	TRUE	NA	NA	NA	C	coding	371	1116	159	1274	10.0	-21	True	AATAAA	-15
PB.2872.6	chr12	-	5745	1	novel_in_catalog	CMKLR1	novel	5283	3	NA	NA	-37	-22422	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	142	429	377	805	100.0	-58	False	NA	NA
PB.10186.3	chr6	+	2829	2	full-splice_match	PLN	ENST00000357525.5	2001	2	10	-838	10	838	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	10	True	AATATA	-27
PB.2872.4	chr12	-	2755	3	full-splice_match	CMKLR1	ENST00000550573.5	632	3	-35	-2088	-35	1136	multi-exon	FALSE	canonical	1	8412	junction_2	22198.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	233	1348	30.0	-56	False	NA	NA
PB.2872.5	chr12	-	2246	3	full-splice_match	CMKLR1	ENST00000550573.5	632	3	21	-1635	21	683	multi-exon	FALSE	canonical	1	8412	junction_2	22198.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	177	1292	25.0	0	True	AATAAA	-22
PB.458.3	chr1	+	3495	10	full-splice_match	PDE4B	ENST00000371045.9	3982	10	188	299	3	2	multi-exon	FALSE	canonical	1	174070	junction_5	56670.58511441254	NA	3	NA	TRUE	NA	NA	NA	C	coding	564	1695	199	1893	30.0	-2	True	AATAAA	-23
PB.9139.1	chr5	+	3271	2	full-splice_match	MIR4458HG	ENST00000606459.1	3239	2	-32	0	-32	0	multi-exon	FALSE	canonical	1	285268	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-32	False	NA	NA
PB.9386.22	chr5	-	2921	5	full-splice_match	STARD4	ENST00000511137.5	1135	5	-29	-1757	-2	-698	multi-exon	FALSE	canonical	1	75844	junction_2	110494.78499317287	NA	2	1	TRUE	NA	NA	NA	C	coding	107	324	357	680	75.0	-1	True	NA	NA
PB.10186.8	chr6	+	1331	2	full-splice_match	PLN	ENST00000357525.5	2001	2	0	670	0	-670	multi-exon	FALSE	canonical	1	585938	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	0	True	AATAAA	-17
PB.10186.9	chr6	+	2611	1	novel_in_catalog	PLN	novel	2001	2	NA	NA	0	-9822	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	0	True	NA	NA
PB.8628.10	chr3	+	4145	10	full-splice_match	SENP5	ENST00000323460.9	6308	10	75	2088	-14	298	multi-exon	FALSE	canonical	1	49296	junction_1	67721.81158530139	NA	2	NA	TRUE	NA	NA	NA	C	coding	755	2268	175	2442	45.0	11	True	NA	NA
PB.9386.24	chr5	-	2778	5	novel_in_catalog	STARD4	novel	4606	6	NA	NA	-6	-831	combination_of_known_junctions	FALSE	canonical	1	34239	junction_4	98343.7628093414	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	299	670	45.0	-7	True	ATTAAA	-25
PB.6391.7	chr2	+	3006	18	full-splice_match	WDR43	ENST00000407426.7	3533	18	25	502	25	-502	multi-exon	FALSE	canonical	1	419891	junction_6	129950.9957138888	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	32	2065	5.0	-22	True	ATTAAA	-9
PB.9386.25	chr5	-	2630	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-100	2076	-20	-1162	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	236	853	65.0	433	False	NA	NA
PB.2855.3	chr12	-	2825	11	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	-2	556	combination_of_known_junctions	FALSE	canonical	1	25817	junction_10	20876.696337303947	NA	0	NA	TRUE	NA	NA	NA	B	coding	573	1722	371	2092	60.0	-1	True	TTTAAA	-14
PB.2855.2	chr12	-	4731	11	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	1	25817	junction_10	20876.696337303947	NA	3	NA	TRUE	NA	NA	NA	B	coding	573	1722	414	2135	10.0	-15	False	AATAAA	-14
PB.2855.1	chr12	-	5210	11	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	-4	588	combination_of_known_junctions	FALSE	canonical	1	11952	junction_10	24558.56998300186	NA	3	NA	TRUE	NA	NA	NA	B	coding	573	1722	302	2023	70.0	-5	True	TTTAAA	-4
PB.6851.29	chr2	-	2838	14	full-splice_match	ATF2	ENST00000264110.6	4176	14	19	1319	16	711	multi-exon	FALSE	canonical	1	239115	junction_9	79357.56893942965	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	281	1798	60.0	12	True	NA	NA
PB.2855.7	chr12	-	2441	1	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	-2059	-28823	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	AATAAA	-41
PB.2855.6	chr12	-	2306	11	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	25817	junction_10	20876.696337303947	NA	1	NA	TRUE	NA	NA	NA	B	coding	573	1722	410	2131	30.0	-11	False	ATTAAA	-41
PB.2855.5	chr12	-	2159	11	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	1	11952	junction_10	24558.56998300186	NA	0	NA	TRUE	NA	NA	NA	B	coding	573	1722	271	1992	55.0	-3	True	ATTAAA	-33
PB.2855.4	chr12	-	2798	11	novel_in_catalog	SLC41A2	novel	4449	10	NA	NA	-23	579	combination_of_known_junctions	FALSE	canonical	1	11952	junction_10	24558.56998300186	NA	2	NA	TRUE	NA	NA	NA	B	coding	573	1722	321	2042	35.0	-24	False	AATATA	-10
PB.7037.38	chr2	+	2112	5	incomplete-splice_match	ACSL3	ENST00000357430.7	5679	17	102	27016	10	943	3prime_fragment	FALSE	canonical	1	231016	junction_3	178957.38883931978	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	463	993	10.0	0	True	AATAAA	-16
PB.7037.39	chr2	+	2614	18	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	17	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	326076.0762263456	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	319	2448	15.0	7	True	AGTAAA	-13
PB.6851.20	chr2	-	4219	15	novel_not_in_catalog	ATF2	novel	4176	14	NA	NA	3	5	intron_retention	FALSE	canonical	1	11	junction_11	182518.6475355578	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	542	1870	20.0	-1	True	AATAAA	-16
PB.9386.27	chr5	-	2380	6	full-splice_match	STARD4	ENST00000296632.7	4606	6	-63	2289	-11	1080	multi-exon	FALSE	canonical	1	238159	junction_5	55003.9408893581	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	199	816	5.0	470	False	AATAAA	-18
PB.6851.26	chr2	-	4019	14	full-splice_match	ATF2	ENST00000264110.6	4176	14	3	154	0	-139	multi-exon	FALSE	canonical	1	239115	junction_9	79357.56893942965	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	297	1814	20.0	-4	True	AATAAA	-31
PB.6851.27	chr2	-	3505	13	novel_in_catalog	ATF2	novel	4176	14	NA	NA	-6	-496	intron_retention	FALSE	canonical	1	3101	junction_7	120241.34828760377	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	269	1657	30.0	24	True	NA	NA
PB.6851.25	chr2	-	3923	13	full-splice_match	ATF2	ENST00000345739.9	4079	13	3	153	0	-138	multi-exon	FALSE	canonical	1	128401	junction_9	98023.04596751725	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	389	1717	20.0	-4	True	AATAAA	-32
PB.10462.1	chr7	-	1684	13	full-splice_match	CPVL	ENST00000265394.9	2091	13	1	406	1	0	multi-exon	FALSE	canonical	1	209464	junction_12	65614.96405181392	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	131	1549	30.0	-2	True	AATAAA	-12
PB.3963.1	chr15	+	5008	15	novel_not_in_catalog	ARIH1	novel	21681	14	NA	NA	-16	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	141459.31453978675	NA	1	NA	TRUE	NA	NA	NA	A	coding	445	1338	409	1746	25.0	-56	False	AATAAA	-19
PB.10288.2	chr6	-	2068	5	full-splice_match	FBXO5	ENST00000229758.7	2037	5	-23	-8	-23	-2	multi-exon	FALSE	canonical	1	103358	junction_4	117857.43963020535	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	83	1426	35.0	-3	True	AATAAA	-30
PB.10523.5	chr7	-	1973	13	novel_in_catalog	DDX56	novel	2336	14	NA	NA	-7	0	intron_retention	FALSE	canonical	1	427315	junction_10	301956.30316776474	NA	1	NA	TRUE	NA	NA	NA	C	coding	375	1128	21	1148	15.0	-8	True	AATAAA	-17
PB.10523.4	chr7	-	1867	14	full-splice_match	DDX56	ENST00000258772.9	2336	14	83	386	6	1	multi-exon	FALSE	canonical	1	427315	junction_11	299202.8559732219	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	25	1668	20.0	-12	True	AATAAA	-18
PB.10523.7	chr7	-	2459	13	novel_in_catalog	DDX56	novel	2336	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	427315	junction_10	311089.9330867358	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	14	1291	20.0	-1	True	AATAAA	-16
PB.10523.6	chr7	-	2591	12	novel_in_catalog	DDX56	novel	2336	14	NA	NA	-4	0	intron_retention	FALSE	canonical	1	427315	junction_9	314636.8085306145	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	35	1162	20.0	-22	True	AATAAA	-16
PB.10523.1	chr7	-	2261	14	full-splice_match	DDX56	ENST00000258772.9	2336	14	74	1	-3	-1	multi-exon	TRUE	canonical	1	427315	junction_11	299202.8559732219	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	34	1677	10.0	-21	True	NA	NA
PB.10523.3	chr7	-	2485	13	novel_in_catalog	DDX56	novel	2336	14	NA	NA	0	14	intron_retention	FALSE	canonical	1	96453	junction_9	397700.5329175581	NA	2	1	TRUE	NA	NA	NA	C	coding	230	693	610	1302	40.0	-1	True	AATAAA	-31
PB.10523.2	chr7	-	2856	13	novel_in_catalog	DDX56	novel	2336	14	NA	NA	0	-2	intron_retention	FALSE	canonical	1	96453	junction_9	397700.5329175581	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	610	1302	10.0	-1	True	NA	NA
PB.12277.25	chrX	-	2257	9	novel_not_in_catalog	FAM122B	novel	4246	9	NA	NA	-15	-64	intron_retention	FALSE	canonical	1	31461	junction_7	142065.84644095277	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	998	1756	35.0	1	True	ATTAAA	-16
PB.12277.22	chrX	-	2334	10	novel_not_in_catalog	FAM122B	novel	4246	9	NA	NA	-18	-304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	189482.1442558052	NA	4	1	TRUE	NA	NA	NA	C	coding	159	480	441	920	35.0	-2	True	AATAAA	-18
PB.12277.23	chrX	-	2371	10	full-splice_match	FAM122B	ENST00000343004.9	4326	10	-102	2057	-25	-50	multi-exon	FALSE	canonical	1	116804	junction_8	129455.368029504	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	1053	1856	10.0	-12	True	ATTAAA	-30
PB.12277.20	chrX	-	4074	10	full-splice_match	FAM122B	ENST00000343004.9	4326	10	-52	304	-20	-304	multi-exon	FALSE	canonical	1	116804	junction_8	129455.368029504	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	1003	1806	35.0	-4	True	AATAAA	-18
PB.10811.3	chr7	-	4014	27	novel_not_in_catalog	CADPS2	novel	6065	30	NA	NA	-6	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	46940.34935657654	NA	2	1	TRUE	NA	NA	NA	B	coding	1068	3207	128	3334	50.0	-5	True	AATAAA	-18
PB.10811.2	chr7	-	4521	27	novel_not_in_catalog	CADPS2	novel	6065	30	NA	NA	-22	-152	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	46940.34935657654	NA	3	1	TRUE	NA	NA	NA	B	coding	1068	3207	144	3350	10.0	23	True	AATATA	-14
PB.10811.1	chr7	-	4657	27	novel_not_in_catalog	CADPS2	novel	6065	30	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	46940.34935657654	NA	3	1	TRUE	NA	NA	NA	B	coding	1068	3207	128	3334	30.0	-5	True	AATAAA	-16
PB.10955.1	chr7	-	4037	29	novel_not_in_catalog	NCAPG2	novel	4134	30	NA	NA	-5	1	any annotated donor/acceptor	FALSE	canonical	1	22264	junction_1	123245.537127685	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	126	3596	30.0	-7	True	AATAAA	-16
PB.10811.5	chr7	-	3830	1	novel_in_catalog	CADPS2	novel	6065	30	NA	NA	-6	-391217	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	153	462	128	589	85.0	-5	True	AAAACA	-23
PB.10811.4	chr7	-	3909	26	novel_not_in_catalog	CADPS2	novel	6065	30	NA	NA	-42	-23951	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	49089.274452165206	NA	2	1	TRUE	NA	NA	NA	B	coding	1068	3207	164	3370	40.0	3	True	AATAAA	-25
PB.10458.4	chr7	-	3154	2	full-splice_match	HIBADH	ENST00000496814.1	570	2	-74	-2510	-63	2510	multi-exon	FALSE	canonical	1	236525	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	89	270	144	413	100.0	-73	True	NA	NA
PB.10458.2	chr7	-	1879	8	novel_not_in_catalog	HIBADH	novel	1990	8	NA	NA	-38	-3	any annotated donor/acceptor	FALSE	canonical	1	5096	junction_6	217217.84973578193	NA	4	1	TRUE	NA	NA	NA	C	coding	187	564	547	1110	15.0	-48	True	AATAAA	-13
PB.10458.3	chr7	-	2703	6	novel_not_in_catalog	HIBADH	novel	1990	8	NA	NA	-6	-8630	any annotated donor/acceptor	FALSE	canonical	1	29400	junction_1	188480.49510376397	NA	2	NA	TRUE	NA	NA	NA	C	coding	213	642	214	855	35.0	-143	True	NA	NA
PB.10458.1	chr7	-	2009	8	full-splice_match	HIBADH	ENST00000265395.6	1990	8	-22	3	-22	-3	multi-exon	FALSE	canonical	1	236525	junction_7	129007.45460789528	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	230	1240	15.0	-159	False	AATAAA	-13
PB.674.4	chr1	+	2158	15	full-splice_match	POLR3C	ENST00000334163.3	1851	15	-50	-257	3	257	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	212	1816	10.0	-40	True	NA	NA
PB.923.3	chr1	-	2348	9	full-splice_match	SELL	ENST00000236147.4	2436	9	85	3	85	-3	multi-exon	FALSE	canonical	1	84369	junction_1	393719.16808018123	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	77	1234	20.0	6	True	AATAAA	-18
PB.978.5	chr1	+	2482	14	novel_not_in_catalog	NPL	novel	2144	13	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	2267	junction_3	44561.841951190036	NA	4	1	TRUE	NA	NA	NA	B	coding	111	336	926	1261	50.0	1	True	AATAAA	-16
PB.923.4	chr1	-	2246	7	novel_not_in_catalog	SELL	novel	2436	9	NA	NA	51	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	392492.29563977855	NA	1	1	TRUE	NA	NA	NA	C	coding	332	999	111	1109	20.0	-28	False	AATAAA	-18
PB.8466.3	chr3	+	3953	3	full-splice_match	TSC22D2	ENST00000466814.1	2093	3	-2024	164	650	-164	multi-exon	FALSE	canonical	1	149546	junction_1	74931.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	756	2271	367	2637	30.0	-3	True	AATAAA	-15
PB.8466.2	chr3	+	4152	3	full-splice_match	TSC22D2	ENST00000466814.1	2093	3	-2059	0	615	0	multi-exon	FALSE	canonical	1	149546	junction_1	74931.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	402	2672	30.0	-2	True	ATTAAA	-15
PB.8466.1	chr3	+	3904	3	full-splice_match	TSC22D2	ENST00000466814.1	2093	3	-2101	290	573	-290	multi-exon	FALSE	canonical	1	149546	junction_1	74931.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	444	2714	100.0	-1264	False	AATACA	-9
PB.8315.5	chr3	+	5943	11	novel_in_catalog	ARHGAP31	novel	9317	12	NA	NA	236	-2993	no_combination_of_known_junctions	FALSE	canonical	1	3637	junction_2	28121.957639716336	NA	3	NA	TRUE	NA	NA	NA	C	coding	1280	3843	644	4486	30.0	3	True	AATAAA	-24
PB.8466.7	chr3	+	3701	3	full-splice_match	TSC22D2	ENST00000466814.1	2093	3	-1608	0	1066	0	multi-exon	FALSE	canonical	1	149546	junction_1	74931.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	574	1725	497	2221	30.0	-771	False	ATTAAA	-15
PB.8466.6	chr3	+	3119	3	full-splice_match	TSC22D2	ENST00000466814.1	2093	3	-2709	1683	-35	-246	multi-exon	FALSE	canonical	1	149546	junction_1	74931.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	1052	3118	60.0	2	True	TTTAAA	-3
PB.8466.5	chr3	+	4966	4	novel_in_catalog	TSC22D2	novel	11154	4	NA	NA	-42	0	no_combination_of_known_junctions	FALSE	canonical	1	14914	junction_1	132535.1067813942	NA	15	NA	TRUE	NA	NA	NA	C	coding	666	2001	1059	3059	30.0	-5	True	ATTAAA	-15
PB.8466.4	chr3	+	4930	4	full-splice_match	TSC22D2	ENST00000361875.7	11154	4	-91	6315	-91	0	multi-exon	FALSE	canonical	1	24159	junction_2	127983.19460078429	NA	12	1	TRUE	NA	NA	NA	C	coding	780	2343	1108	3450	30.0	3	True	ATTAAA	-15
PB.4990.33	chr17	-	2058	14	incomplete-splice_match	STAT3	ENST00000264657.9	5047	24	114	15508	0	-5768	3prime_fragment	FALSE	canonical	1	278333	junction_13	237723.5740591488	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	200	1525	80.0	-13	True	AATAAA	-5
PB.4990.32	chr17	-	2666	24	full-splice_match	STAT3	ENST00000264657.9	5047	24	125	2256	-4	17	multi-exon	FALSE	canonical	1	278333	junction_23	241509.96068015823	NA	2	1	TRUE	NA	NA	NA	C	coding	770	2313	189	2501	60.0	-2	True	NA	NA
PB.4990.31	chr17	-	2696	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	-39	3	combination_of_known_junctions	FALSE	canonical	1	149719	junction_2	295948.69548311713	NA	2	NA	TRUE	NA	NA	NA	C	coding	722	2169	245	2413	15.0	56	False	AATAGA	-16
PB.4990.30	chr17	-	2652	24	novel_in_catalog	STAT3	novel	5047	24	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	1	149719	junction_2	283068.4771929515	NA	16	1	TRUE	NA	NA	NA	C	coding	722	2169	207	2375	15.0	116	False	AATAGA	-10
PB.5333.1	chr17	-	1756	1	novel_in_catalog	SIRT7	novel	909	8	NA	NA	1291	-509	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	7730	False	AATAAA	-7
PB.10876.4	chr7	+	2949	18	full-splice_match	TTC26	ENST00000464848.5	4299	18	-4	1354	-2	340	multi-exon	FALSE	canonical	1	43825	junction_5	15439.01746519698	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	85	1749	30.0	-4	True	AATAAA	-14
PB.4990.34	chr17	-	1940	1	full-splice_match	STAT3	ENST00000590776.1	1483	1	-54	-403	7	403	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	17	54	291	344	70.0	-2	True	NA	NA
PB.7358.2	chr20	+	1846	1	full-splice_match	MOCS3	ENST00000244051.2	5106	1	6	3254	6	-3254	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	460	1383	12	1394	35.0	14	True	AATACA	-27
PB.8365.2	chr3	+	2024	5	full-splice_match	FAM86JP	ENST00000485843.1	2012	5	-15	3	-5	-3	multi-exon	FALSE	canonical	1	4148	junction_1	6366.578295089129	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	3	398	30.0	-49	False	NA	NA
PB.8365.1	chr3	+	2124	6	novel_in_catalog	FAM86JP	novel	1910	5	NA	NA	-20	-6	no_combination_of_known_junctions	FALSE	canonical	1	172	junction_4	8324.102296344032	NA	4	NA	TRUE	NA	NA	NA	C	coding	30	93	423	515	45.0	-64	False	NA	NA
PB.7358.1	chr20	+	2269	1	full-splice_match	MOCS3	ENST00000244051.2	5106	1	-5	2842	-5	-2842	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	460	1383	23	1405	25.0	3	True	AATAAA	-22
PB.2841.1	chr12	+	3433	4	novel_not_in_catalog	LINC02456	novel	1323	6	NA	NA	8938	-110004	any annotated donor/acceptor	FALSE	canonical	1	112	junction_3	234.78974045350068	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	4	True	NA	NA
PB.3332.2	chr14	-	2495	21	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	41079	junction_5	173727.7614149506	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	60	2312	25.0	-5	True	AATAAA	-34
PB.3332.3	chr14	-	3825	20	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	94255	junction_6	171018.1346688155	NA	3	NA	TRUE	NA	NA	NA	C	coding	495	1488	51	1538	30.0	4	True	AATAAA	-32
PB.3332.1	chr14	-	2846	21	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	1	-1	intron_retention	FALSE	canonical	1	182949	junction_11	151962.38705314547	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	1452	2663	25.0	0	True	AATAAA	-34
PB.3332.6	chr14	-	2848	22	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	55544	junction_8	189642.70120227948	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	56	1714	30.0	-1	True	AATAAA	-32
PB.3332.7	chr14	-	2593	22	full-splice_match	AP1G2	ENST00000397120.7	2609	22	16	0	1	0	multi-exon	FALSE	canonical	1	259343	junction_21	133324.73638891848	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	55	2412	30.0	0	True	AATAAA	-32
PB.3332.4	chr14	-	3722	18	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	259343	junction_17	136548.30397933625	NA	1	1	TRUE	NA	NA	NA	C	coding	551	1656	1886	3541	30.0	14	True	AATAAA	-32
PB.3332.5	chr14	-	2931	22	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	-3	0	intron_retention	FALSE	canonical	1	55544	junction_8	200945.03138885635	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	59	1093	30.0	-4	True	AATAAA	-32
PB.9950.10	chr6	-	3648	10	novel_not_in_catalog	SRPK1	novel	4592	16	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	1275	junction_8	226799.74451620816	NA	6	NA	TRUE	NA	NA	NA	C	coding	392	1179	201	1379	35.0	-1	True	AATAAA	-19
PB.6821.7	chr2	-	2764	13	novel_in_catalog	FASTKD1	novel	2967	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	24276	junction_11	95034.60560223428	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	391	2694	55.0	-12	True	AATAAA	-17
PB.3332.8	chr14	-	2765	21	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	259343	junction_20	132230.81343146725	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2529	56	2584	30.0	-1	True	AATAAA	-32
PB.3332.9	chr14	-	2655	22	novel_in_catalog	AP1G2	novel	3298	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	182949	junction_12	151300.34575131387	NA	21	3	TRUE	NA	NA	NA	C	coding	403	1212	1263	2474	30.0	0	True	AATAAA	-32
PB.9950.14	chr6	-	4237	17	novel_not_in_catalog	SRPK1	novel	4592	16	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	155662.74615213816	NA	3	1	TRUE	NA	NA	NA	C	coding	548	1647	323	1969	35.0	-3	True	AATAAA	-18
PB.9950.15	chr6	-	4161	14	novel_in_catalog	SRPK1	novel	4592	16	NA	NA	-29	-2	no_combination_of_known_junctions	FALSE	canonical	1	2249	junction_9	170203.33022030693	NA	2	NA	TRUE	NA	NA	NA	C	coding	590	1773	121	1893	35.0	-30	False	AATAAA	-18
PB.7914.16	chr3	+	3697	10	novel_not_in_catalog	THUMPD3	novel	2877	10	NA	NA	16	-232	any annotated donor/acceptor	FALSE	canonical	1	9803	junction_1	130139.25690838513	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	303	1826	40.0	9	True	AATAAA	-20
PB.450.1	chr1	-	3211	8	full-splice_match	ITGB3BP	ENST00000460394.5	873	8	-75	-2263	-2	-159	multi-exon	FALSE	canonical	1	4355	junction_1	139951.1500421574	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	125	685	40.0	-10	True	AATAAA	-17
PB.450.2	chr1	-	1846	7	incomplete-splice_match	ITGB3BP	ENST00000460394.5	873	8	-43	923	-10	-923	3prime_fragment	FALSE	canonical	1	313262	junction_5	53675.754758705225	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	93	584	90.0	-1	True	NA	NA
PB.3315.3	chr14	+	3249	7	novel_not_in_catalog	LRP10	novel	6886	7	NA	NA	161	-3	intron_retention	FALSE	canonical	1	15213	junction_4	461821.0386151581	NA	6	NA	TRUE	NA	NA	NA	C	coding	721	2166	531	2696	40.0	34	True	AATAAA	-16
PB.3315.2	chr14	+	2865	7	full-splice_match	LRP10	ENST00000359591.8	6886	7	521	3500	-170	-3	multi-exon	FALSE	canonical	1	976374	junction_1	183551.10814043955	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	171	2312	40.0	-2	True	AATAAA	-16
PB.3315.1	chr14	+	2993	7	full-splice_match	LRP10	ENST00000359591.8	6886	7	150	3743	150	-246	multi-exon	TRUE	canonical	1	976374	junction_1	183551.10814043955	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	542	2683	25.0	23	True	AGTAAA	-15
PB.12230.1	chrX	+	4146	19	novel_in_catalog	WDR44	novel	3877	18	NA	NA	9	42	combination_of_known_junctions	FALSE	canonical	1	8054	junction_1	45433.39938519287	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	1259	3130	50.0	-55	True	AGTAAA	-12
PB.12230.2	chrX	+	3823	20	full-splice_match	WDR44	ENST00000254029.7	4111	20	292	-4	202	4	multi-exon	FALSE	canonical	1	107772	junction_1	32347.114469005024	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	104	2845	25.0	-92	False	ATTAAA	-44
PB.12230.3	chrX	+	3192	20	full-splice_match	WDR44	ENST00000254029.7	4111	20	-6	925	-6	-300	multi-exon	FALSE	canonical	1	107772	junction_1	32347.114469005024	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	402	3143	55.0	-34	True	AATAAA	-27
PB.12230.4	chrX	+	3977	19	novel_in_catalog	WDR44	novel	3877	18	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	2579	junction_13	48049.398437544216	NA	2	NA	TRUE	NA	NA	NA	C	coding	872	2619	388	3006	40.0	-20	True	ATTAAA	-37
PB.9947.4	chr6	+	1792	3	novel_in_catalog	RPL10A	novel	716	6	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	2544894	junction_2	1535896.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	963	1295	5.0	2	True	AATAAA	-16
PB.11682.1	chr9	+	5985	9	full-splice_match	TGFBR1	ENST00000374994.8	6516	9	27	504	5	30	multi-exon	FALSE	canonical	1	70203	junction_1	74622.71506719654	NA	1	NA	TRUE	NA	NA	NA	C	coding	503	1512	91	1602	35.0	0	True	AATAAA	-14
PB.933.9	chr1	+	3148	9	novel_in_catalog	METTL13	novel	759	4	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	1	25286	junction_1	121255.81411111799	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	97	2193	25.0	9	True	ATTAAA	-11
PB.933.8	chr1	+	2218	5	incomplete-splice_match	METTL13	ENST00000361735.3	3327	8	-26	6649	-6	143	3prime_fragment	FALSE	canonical	1	238718	junction_2	61729.94151544289	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	293	1846	10.0	2	True	NA	NA
PB.8545.9	chr3	-	2820	6	novel_in_catalog	DCUN1D1	novel	7954	7	NA	NA	7	-85	no_combination_of_known_junctions	FALSE	canonical	1	5684	junction_5	86217.06151197685	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	174	587	55.0	5404	False	ATTAAA	-21
PB.8545.8	chr3	-	3043	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	19	85	1	-85	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	31	810	55.0	5398	False	ATTAAA	-21
PB.8545.7	chr3	-	3396	6	novel_in_catalog	DCUN1D1	novel	7954	7	NA	NA	48	409	no_combination_of_known_junctions	FALSE	canonical	1	5684	junction_5	86217.06151197685	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	265	669	35.0	3	True	AATAAA	-22
PB.218.2	chr1	-	1510	8	novel_in_catalog	RPA2	novel	1752	9	NA	NA	0	2	intron_retention	FALSE	canonical	1	18495	junction_4	268353.2644745028	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	146	883	35.0	-14	True	AATAAA	-38
PB.218.1	chr1	-	1709	9	full-splice_match	RPA2	ENST00000373912.7	1752	9	9	34	9	-20	multi-exon	FALSE	canonical	1	241701	junction_4	220625.8664736172	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	292	1104	45.0	-10	True	AATAAA	-16
PB.8545.4	chr3	-	3542	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	17	-412	-1	412	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	33	812	35.0	5396	False	AATAAA	-25
PB.8545.3	chr3	-	4463	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	-61	-1255	44	1255	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	3	NA	TRUE	NA	NA	NA	C	coding	259	780	111	890	35.0	-1	True	TATAAA	-18
PB.10645.4	chr7	+	3917	18	full-splice_match	DMTF1	ENST00000579677.5	3915	18	-4	2	-1	0	multi-exon	FALSE	canonical	1	87707	junction_9	101924.77354982641	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	1250	2734	30.0	-374	False	AATAAA	-15
PB.8545.1	chr3	-	4846	7	full-splice_match	DCUN1D1	ENST00000632685.1	3147	7	-54	-1645	51	1645	multi-exon	FALSE	canonical	1	73027	junction_3	100077.06286116048	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	104	883	15.0	5325	False	CATAAA	-16
PB.933.2	chr1	+	3218	7	novel_in_catalog	METTL13	novel	759	4	NA	NA	-23	-5	intron_retention	FALSE	canonical	1	34477	junction_4	129326.56937306254	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	328	2262	25.0	-33	True	ATTAAA	-12
PB.4015.1	chr15	+	885	9	full-splice_match	PSMA4	ENST00000044462.11	4411	9	15	3511	1	2	multi-exon	FALSE	canonical	1	1556223	junction_4	682498.4201106256	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	750	136	885	75.0	-16	True	AAAACA	-32
PB.9558.3	chr5	+	5446	21	novel_not_in_catalog	HMGXB3	novel	5567	21	NA	NA	4	-7	intron_retention	FALSE	canonical	1	3233	junction_6	123240.20705329896	NA	4	1	TRUE	NA	NA	NA	C	coding	760	2283	2221	4503	25.0	-17	True	AATAAA	-21
PB.4015.3	chr15	+	4583	5	novel_in_catalog	PSMA4	novel	944	9	NA	NA	2	3	intron_retention	FALSE	canonical	1	3090219	junction_4	349975.42825889937	NA	4	NA	TRUE	NA	NA	NA	C	coding	190	573	3766	4338	50.0	-15	True	AATAAA	-14
PB.4015.2	chr15	+	3049	6	full-splice_match	PSMA4	ENST00000559934.5	2741	6	-16	-292	1	-6	multi-exon	FALSE	canonical	1	1556223	junction_1	819571.4442633053	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	2082	2795	35.0	-16	True	AATAAA	-23
PB.4015.5	chr15	+	1157	9	full-splice_match	PSMA4	ENST00000044462.11	4411	9	29	3225	2	8	multi-exon	FALSE	canonical	1	1556223	junction_4	682498.4201106256	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	122	907	40.0	-2	True	AATAAA	-19
PB.4015.4	chr15	+	2349	7	novel_in_catalog	PSMA4	novel	944	9	NA	NA	11	5	intron_retention	FALSE	canonical	1	1556223	junction_2	755206.6623934619	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	1389	2102	40.0	-4872	False	AATAAA	-16
PB.9558.4	chr5	+	5278	20	full-splice_match	HMGXB3	ENST00000502717.5	4974	20	6	-310	6	-9	multi-exon	FALSE	canonical	1	149025	junction_6	95107.43557991277	NA	0	NA	TRUE	NA	NA	NA	C	coding	1292	3879	459	4337	20.0	-15	True	AATAAA	-19
PB.9558.5	chr5	+	5041	20	novel_not_in_catalog	HMGXB3	novel	5567	21	NA	NA	6	-9	intron_retention	FALSE	canonical	1	404	junction_4	113085.50560164664	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3642	459	4100	20.0	-15	True	AATAAA	-19
PB.10804.1	chr7	+	4033	4	full-splice_match	LSM8	ENST00000249299.6	1305	4	49	-2777	49	2777	multi-exon	FALSE	canonical	1	1032625	junction_1	88535.37668450204	NA	2	NA	TRUE	NA	NA	NA	C	coding	96	291	144	434	35.0	-2666	False	AATAAA	-20
PB.10804.3	chr7	+	2511	4	full-splice_match	LSM8	ENST00000249299.6	1305	4	79	-1285	-33	1285	multi-exon	FALSE	canonical	1	1032625	junction_1	88535.37668450204	NA	3	NA	TRUE	NA	NA	NA	C	coding	96	291	114	404	40.0	-21	True	ATTAAA	-23
PB.10804.2	chr7	+	2758	4	full-splice_match	LSM8	ENST00000249299.6	1305	4	77	-1530	-35	1530	multi-exon	FALSE	canonical	1	1032625	junction_1	88535.37668450204	NA	0	NA	TRUE	NA	NA	NA	C	coding	96	291	116	406	25.0	-23	True	ATTAAA	-27
PB.10804.5	chr7	+	4300	4	full-splice_match	LSM8	ENST00000249299.6	1305	4	94	-3089	-18	3089	multi-exon	FALSE	canonical	1	1032625	junction_1	88535.37668450204	NA	1	NA	TRUE	NA	NA	NA	C	coding	96	291	99	389	35.0	-6	True	NA	NA
PB.10804.4	chr7	+	4137	4	full-splice_match	LSM8	ENST00000249299.6	1305	4	88	-2920	-24	2920	multi-exon	FALSE	canonical	1	1032625	junction_1	88535.37668450204	NA	1	NA	TRUE	NA	NA	NA	C	coding	96	291	105	395	45.0	-12	True	NA	NA
PB.10804.7	chr7	+	1907	3	full-splice_match	LSM8	ENST00000422760.1	1920	3	4	9	4	0	multi-exon	FALSE	canonical	1	1164129	junction_1	41795.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	1	327	45.0	-4	True	ATTAAA	-20
PB.10804.6	chr7	+	4769	4	full-splice_match	LSM8	ENST00000249299.6	1305	4	103	-3567	-9	3567	multi-exon	FALSE	canonical	1	1032625	junction_1	88535.37668450204	NA	3	NA	TRUE	NA	NA	NA	C	coding	96	291	90	380	20.0	3	True	AATAAA	-15
PB.9264.1	chr5	+	1831	9	full-splice_match	CCNB1	ENST00000256442.9	2169	9	138	200	13	-200	multi-exon	FALSE	canonical	1	1366997	junction_2	290809.0207858716	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	116	1417	15.0	-2	True	AGTAAA	-13
PB.9264.2	chr5	+	1480	9	full-splice_match	CCNB1	ENST00000256442.9	2169	9	140	549	15	-1	multi-exon	FALSE	canonical	1	1366997	junction_2	290809.0207858716	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	114	1415	20.0	0	True	AATAAA	-27
PB.9264.3	chr5	+	2018	9	full-splice_match	CCNB1	ENST00000256442.9	2169	9	141	10	16	-10	multi-exon	FALSE	canonical	1	1366997	junction_2	290809.0207858716	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	113	1414	45.0	1	True	AATAAA	-10
PB.4468.1	chr16	-	2894	12	full-splice_match	SLC38A7	ENST00000219320.8	4392	12	361	1137	0	126	multi-exon	TRUE	canonical	1	34923	junction_11	27846.402151685383	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	367	1755	65.0	26	True	NA	NA
PB.4468.3	chr16	-	3007	11	novel_in_catalog	SLC38A7	novel	4549	11	NA	NA	0	-22	intron_retention	FALSE	canonical	1	34923	junction_10	29089.08210119391	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	394	1200	100.0	-1	True	NA	NA
PB.10645.1	chr7	+	3728	19	novel_in_catalog	DMTF1	novel	3801	18	NA	NA	23	4	combination_of_known_junctions	TRUE	canonical	1	24375	junction_1	119105.82219792805	NA	2	NA	TRUE	NA	NA	NA	C	coding	760	2283	443	2725	55.0	-398	False	AATGAA	-19
PB.4468.5	chr16	-	2652	12	novel_in_catalog	SLC38A7	novel	4549	11	NA	NA	-1	-22	combination_of_known_junctions	FALSE	canonical	1	3078	junction_11	35721.786643100684	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	273	1661	100.0	25	True	NA	NA
PB.4468.4	chr16	-	2745	12	full-splice_match	SLC38A7	ENST00000219320.8	4392	12	362	1285	1	-22	multi-exon	FALSE	canonical	1	34923	junction_11	27846.402151685383	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	366	1754	100.0	27	True	NA	NA
PB.4468.6	chr16	-	2520	11	novel_in_catalog	SLC38A7	novel	4549	11	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	1	1058	junction_10	38009.757638795854	NA	2	1	TRUE	NA	NA	NA	C	coding	462	1389	141	1529	100.0	28	True	NA	NA
PB.603.8	chr1	+	3142	3	full-splice_match	RBM15	ENST00000617047.1	3284	3	-26	168	-26	-168	multi-exon	FALSE	canonical	1	24569	junction_1	1090.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	99	2900	50.0	15	True	NA	NA
PB.437.1	chr1	+	2944	9	full-splice_match	PRKAA2	ENST00000371244.8	9347	9	-9	6412	-9	-6411	multi-exon	FALSE	canonical	1	32699	junction_2	11079.16506260174	NA	0	NA	TRUE	NA	NA	NA	A	coding	552	1659	76	1734	30.0	-1	True	AATAAA	-36
PB.6788.10	chr2	+	3145	1	novel_in_catalog	GPD2	novel	456	4	NA	NA	-20	-62331	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-14	True	NA	NA
PB.6788.11	chr2	+	2659	17	full-splice_match	GPD2	ENST00000438166.6	2457	17	0	-202	0	-13	multi-exon	FALSE	canonical	1	48319	junction_5	67046.81432935382	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	134	2317	60.0	6	True	AAAACA	-13
PB.6788.12	chr2	+	4600	10	incomplete-splice_match	GPD2	ENST00000409125.8	2661	18	77024	-2926	-20576	-249	5prime_fragment	FALSE	canonical	1	61493	junction_9	69360.15961275011	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	78	1364	20.0	NA	False	AATAAA	-17
PB.3301.9	chr14	-	3146	9	full-splice_match	HNRNPC	ENST00000553300.5	1375	9	15	-1786	-2	-15	multi-exon	FALSE	canonical	1	233847	junction_6	855594.4623457716	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	193	1074	40.0	14	True	NA	NA
PB.3301.4	chr14	-	3181	8	full-splice_match	HNRNPC	ENST00000557201.5	1371	8	-13	-1797	4	-4	multi-exon	FALSE	canonical	1	120000	junction_7	658105.5533324888	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	178	1098	30.0	3	True	NA	NA
PB.3301.5	chr14	-	3193	9	full-splice_match	HNRNPC	ENST00000554455.5	1784	9	-2	-1407	-2	-7	multi-exon	FALSE	canonical	1	233847	junction_6	851664.3440304017	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	193	1113	35.0	14	True	NA	NA
PB.3301.6	chr14	-	3631	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	3	-14	intron_retention	FALSE	canonical	1	233847	junction_6	892063.7360177452	NA	2	NA	TRUE	NA	NA	NA	C	coding	293	882	677	1558	40.0	23	True	NA	NA
PB.3301.7	chr14	-	3259	8	full-splice_match	HNRNPC	ENST00000553753.5	1790	8	-37	-1432	2	-14	multi-exon	FALSE	canonical	1	233847	junction_5	848376.6727895032	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	206	1072	40.0	1	True	NA	NA
PB.3301.1	chr14	-	4369	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	7	-3	intron_retention	FALSE	canonical	1	213933	junction_7	572488.4158707929	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	1404	2285	30.0	6	True	NA	NA
PB.3301.2	chr14	-	3131	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	120000	junction_7	600174.9202894851	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	166	1047	30.0	15	True	NA	NA
PB.3301.3	chr14	-	3151	8	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	623843.0678558806	NA	132	2	TRUE	NA	NA	NA	C	coding	293	882	187	1068	30.0	18	True	NA	NA
PB.5535.8	chr18	+	3734	27	novel_not_in_catalog	ATP9B	novel	427	3	NA	NA	0	-3594	any annotated donor/acceptor	FALSE	canonical	1	1729	junction_26	32080.806110756883	NA	6	1	TRUE	NA	NA	NA	C	coding	1006	3021	4	3024	65.0	2	True	AATAAA	-18
PB.8840.9	chr4	+	2456	7	full-splice_match	CCNG2	ENST00000395640.5	1410	7	105	-1151	-24	1030	multi-exon	FALSE	canonical	1	355815	junction_6	79287.06406189823	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	132	1166	25.0	5	True	AATAAA	-22
PB.9615.1	chr5	+	2583	15	novel_not_in_catalog	RANBP17	novel	1199	7	NA	NA	0	2314	any annotated donor/acceptor	TRUE	canonical	1	628	junction_14	15071.671088096207	NA	0	NA	TRUE	NA	NA	NA	A	coding	586	1761	103	1863	30.0	-89	False	TATAAA	-22
PB.5535.1	chr18	+	4197	29	full-splice_match	ATP9B	ENST00000307671.12	4329	29	-12	144	-7	1	multi-exon	FALSE	canonical	1	51946	junction_1	24902.28290483523	NA	1	1	TRUE	NA	NA	NA	C	coding	1136	3411	27	3437	15.0	-2030	False	AATAAA	-18
PB.8840.6	chr4	+	2571	8	full-splice_match	CCNG2	ENST00000316355.9	5526	8	106	2849	32	1026	multi-exon	FALSE	canonical	1	278896	junction_1	110473.54077528506	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	251	1285	15.0	-1242	False	AATAAA	-18
PB.5535.3	chr18	+	4323	29	full-splice_match	ATP9B	ENST00000307671.12	4329	29	-3	9	0	-5	multi-exon	FALSE	canonical	1	51946	junction_1	24902.28290483523	NA	0	NA	TRUE	NA	NA	NA	C	coding	1136	3411	18	3428	35.0	-12	True	AGTAAA	-26
PB.5535.2	chr18	+	4353	30	full-splice_match	ATP9B	ENST00000426216.6	4361	30	0	8	0	-8	multi-exon	FALSE	canonical	1	34628	junction_29	29516.503199841514	NA	1	NA	TRUE	NA	NA	NA	C	coding	1147	3444	18	3461	35.0	-12	True	AGTAAA	-23
PB.5535.5	chr18	+	4014	29	full-splice_match	ATP9B	ENST00000307671.12	4329	29	-3	318	0	-172	multi-exon	FALSE	canonical	1	51946	junction_1	24902.28290483523	NA	0	NA	TRUE	NA	NA	NA	C	coding	1136	3411	18	3428	40.0	-12	True	NA	NA
PB.5535.4	chr18	+	4219	30	full-splice_match	ATP9B	ENST00000426216.6	4361	30	0	142	0	0	multi-exon	FALSE	canonical	1	34628	junction_29	29516.503199841514	NA	2	1	TRUE	NA	NA	NA	C	coding	1147	3444	18	3461	20.0	-12	True	AATAAA	-16
PB.5535.7	chr18	+	1650	5	full-splice_match	ATP9B	ENST00000586722.5	1650	5	-10	10	1	-10	multi-exon	FALSE	canonical	0	0	junction_4	49814.67152042157	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1074	577	1650	70.0	-8	True	NA	NA
PB.5535.6	chr18	+	3149	27	novel_not_in_catalog	ATP9B	novel	427	3	NA	NA	0	-3178	any annotated donor/acceptor	FALSE	canonical	1	829	junction_26	32188.65268296234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	18	3041	50.0	-12	True	AATAAA	-18
PB.401.31	chr1	-	4044	24	novel_in_catalog	EPS15	novel	4736	23	NA	NA	-8	-1099	no_combination_of_known_junctions	FALSE	canonical	1	12754	junction_16	165684.8900962659	NA	2	NA	TRUE	NA	NA	NA	C	coding	866	2601	106	2706	65.0	-1	True	ATTAAA	-10
PB.401.30	chr1	-	4055	25	full-splice_match	EPS15	ENST00000371733.7	5225	25	6	1164	6	-1164	multi-exon	FALSE	canonical	1	221574	junction_24	136702.54397982341	NA	5	NA	TRUE	NA	NA	NA	C	coding	896	2691	92	2782	25.0	0	True	AATAGA	-16
PB.401.33	chr1	-	3765	25	full-splice_match	EPS15	ENST00000371733.7	5225	25	68	1392	-6	-1392	multi-exon	FALSE	canonical	1	221574	junction_24	136702.54397982341	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	30	2720	25.0	5	True	AATACA	-14
PB.401.32	chr1	-	3975	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-17	-1378	any annotated donor/acceptor	FALSE	canonical	1	28229	junction_16	160989.57882842654	NA	19	2	TRUE	NA	NA	NA	C	coding	933	2802	115	2916	15.0	-10	True	AATACA	-28
PB.401.35	chr1	-	4155	8	full-splice_match	EPS15	ENST00000471391.1	731	8	-17	-3407	-17	-1	multi-exon	FALSE	canonical	1	221574	junction_7	50022.23054292757	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	41	640	95.0	-6	True	NA	NA
PB.401.34	chr1	-	3552	22	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-37	-17328	any annotated donor/acceptor	FALSE	canonical	1	2082	junction_1	141802.23673448348	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	135	2264	50.0	-30	False	NA	NA
PB.8884.1	chr4	+	3719	10	novel_in_catalog	CCSER1	novel	2684	10	NA	NA	-78	974	combination_of_known_junctions	FALSE	canonical	1	7217	junction_9	4835.144674639153	NA	0	NA	TRUE	NA	NA	NA	B	coding	743	2232	417	2648	25.0	-1110	False	AATAAA	-25
PB.4001.2	chr15	-	1300	12	full-splice_match	ETFA	ENST00000557943.5	2287	12	50	937	-5	29	multi-exon	FALSE	canonical	1	851196	junction_11	397266.810955114	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	32	1033	35.0	49	True	AATAAA	-26
PB.4001.3	chr15	-	1476	13	novel_in_catalog	ETFA	novel	2287	12	NA	NA	2	27	combination_of_known_junctions	TRUE	canonical	1	10821	junction_12	791162.5968408068	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	4	True	AATAAA	-24
PB.4001.1	chr15	-	2223	12	full-splice_match	ETFA	ENST00000557943.5	2287	12	64	0	-1	0	multi-exon	TRUE	canonical	1	851196	junction_11	397266.810955114	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	18	1019	15.0	63	True	TATAAA	-17
PB.9105.4	chr4	-	8423	18	incomplete-splice_match	FAT1	ENST00000614102.4	14758	29	103381	8	-10382	-8	5prime_fragment	FALSE	canonical	1	307069	junction_14	85292.98184765068	NA	0	NA	TRUE	NA	NA	NA	B	coding	2414	7245	390	7634	45.0	7770	False	AATAAA	-6
PB.4001.4	chr15	-	1196	11	full-splice_match	ETFA	ENST00000433983.6	1346	11	-60	210	2	27	multi-exon	FALSE	canonical	1	248739	junction_10	583880.3617689158	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	77	931	30.0	4	True	AATAAA	-24
PB.4001.5	chr15	-	1429	13	novel_in_catalog	ETFA	novel	2287	12	NA	NA	2	21	combination_of_known_junctions	FALSE	canonical	1	5114	junction_2	831204.3266405136	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	77	1129	45.0	4	True	AATAAA	-18
PB.2172.3	chr11	+	2116	5	novel_in_catalog	SERPINH1	novel	2299	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	3725	junction_1	1065302.547293608	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	161	1417	20.0	0	True	AATAAA	-15
PB.2172.2	chr11	+	2075	5	full-splice_match	SERPINH1	ENST00000358171.7	2225	5	165	-15	-2	15	multi-exon	FALSE	canonical	1	1132053	junction_2	601509.481572558	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	104	1360	40.0	-2	True	AATAAA	-31
PB.2172.1	chr11	+	2111	6	full-splice_match	SERPINH1	ENST00000533603.5	2299	6	187	1	0	0	multi-exon	FALSE	canonical	1	47528	junction_1	1107468.4012937977	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	156	1412	20.0	-10	True	AATAAA	-15
PB.2051.2	chr11	-	2354	11	novel_not_in_catalog	SLC25A45	novel	2053	3	NA	NA	-892	0	intron_retention	FALSE	canonical	1	202	junction_10	38296.64552620764	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	1239	1700	20.0	1840	False	NA	NA
PB.2051.1	chr11	-	2799	6	full-splice_match	SLC25A45	ENST00000527174.5	2138	6	-662	1	2	-1	multi-exon	FALSE	canonical	1	32440	junction_5	25508.30736368056	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	719	1585	15.0	-24	True	NA	NA
PB.3405.2	chr14	-	850	7	full-splice_match	FKBP3	ENST00000396062.3	1346	7	49	447	3	-447	multi-exon	FALSE	canonical	1	846532	junction_6	356995.96829516155	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	25	699	35.0	0	True	AATAAA	-19
PB.145.11	chr1	-	3902	12	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	5	3	intron_retention	FALSE	canonical	1	7908	junction_4	455893.34831979225	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	214	1107	25.0	-1	True	AATAAA	-19
PB.10643.4	chr7	-	4122	19	novel_in_catalog	SEMA3D	novel	6265	17	NA	NA	-7	1388	combination_of_known_junctions	FALSE	canonical	1	18330	junction_18	8502.893889548051	NA	0	NA	TRUE	NA	NA	NA	B	coding	777	2334	358	2691	65.0	-25	True	AATAAA	-17
PB.9086.1	chr4	-	3045	1	intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	107	324	1203	1526	35.0	-7254	False	NA	NA
PB.7914.10	chr3	+	2869	10	full-splice_match	THUMPD3	ENST00000345094.7	3961	10	5	1087	5	2	multi-exon	FALSE	canonical	1	92279	junction_1	110016.43161819056	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	330	1853	25.0	-2	True	ATTAAA	-24
PB.468.1	chr1	-	2000	12	novel_in_catalog	WLS	novel	2037	12	NA	NA	-3	-54	combination_of_known_junctions	FALSE	canonical	1	131990	junction_1	177250.08927771708	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	258	1895	60.0	-8	True	AATACA	-20
PB.468.2	chr1	-	2802	12	full-splice_match	WLS	ENST00000262348.8	2748	12	-93	39	-93	-39	multi-exon	FALSE	canonical	1	517220	junction_11	85737.36689034285	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	348	1973	30.0	-98	False	AATAAA	-16
PB.468.3	chr1	-	2608	12	full-splice_match	WLS	ENST00000262348.8	2748	12	4	136	-4	-2	multi-exon	FALSE	canonical	1	517220	junction_11	85737.36689034285	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	251	1876	30.0	-1	True	ATTAAA	-28
PB.6630.10	chr2	-	2907	9	novel_not_in_catalog	STARD7	novel	3368	8	NA	NA	-135	0	any annotated donor/acceptor	FALSE	canonical	1	16	junction_7	648238.2369200771	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	358	1044	40.0	-10	True	AATAAA	-18
PB.8755.21	chr4	+	7390	8	novel_not_in_catalog	TMEM33	novel	7482	7	NA	NA	-2	-18	intron_retention	FALSE	non_canonical	0	0	junction_7	206045.58903132408	NA	6	NA	TRUE	NA	NA	NA	C	coding	229	690	390	1079	50.0	13	True	AATAAA	-13
PB.8251.3	chr3	+	5745	4	incomplete-splice_match	CRYBG3	ENST00000389622.6	10729	22	-42	68233	-42	-64531	3prime_fragment	FALSE	canonical	1	37103	junction_1	10660.26523539114	NA	0	NA	TRUE	NA	NA	NA	C	coding	1845	5535	210	5744	55.0	-13	True	NA	NA
PB.1920.3	chr11	+	2724	5	full-splice_match	ZNF408	ENST00000311764.2	2442	5	213	-495	0	495	multi-exon	FALSE	canonical	1	90260	junction_2	24567.93401977464	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	18	2180	70.0	0	True	NA	NA
PB.8251.1	chr3	+	10723	21	novel_in_catalog	CRYBG3	novel	10729	22	NA	NA	-59	2	intron_retention	FALSE	canonical	1	6349	junction_1	33903.686674571254	NA	3	NA	TRUE	NA	NA	NA	C	coding	2679	8040	1033	9072	15.0	-64	False	AATAAA	-15
PB.8251.6	chr3	+	4139	4	incomplete-splice_match	CRYBG3	ENST00000389622.6	10729	22	-23	69820	-23	-66118	3prime_fragment	FALSE	canonical	1	37103	junction_1	10660.26523539114	NA	0	NA	TRUE	NA	NA	NA	C	coding	1316	3948	191	4138	60.0	6	True	GATAAA	-38
PB.8251.5	chr3	+	10772	22	full-splice_match	CRYBG3	ENST00000389622.6	10729	22	-25	-18	-25	18	multi-exon	FALSE	canonical	1	37103	junction_1	31492.565998287002	NA	2	NA	TRUE	NA	NA	NA	C	coding	2970	8913	193	9105	25.0	4	True	AATAAA	-31
PB.1920.2	chr11	+	2299	6	novel_not_in_catalog	ZNF408	novel	2442	5	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	142	junction_4	65851.46555210445	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	899	2251	10.0	-15	True	CATAAA	-16
PB.7914.11	chr3	+	3913	10	novel_in_catalog	THUMPD3	novel	2877	10	NA	NA	9	-232	combination_of_known_junctions	FALSE	canonical	1	37823	junction_1	123059.80749122672	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	519	2042	40.0	2	True	AATAAA	-20
PB.10853.3	chr7	+	4174	18	full-splice_match	EXOC4	ENST00000253861.4	4185	18	11	0	11	0	multi-exon	FALSE	canonical	1	271851	junction_15	51495.8807982094	NA	1	NA	TRUE	NA	NA	NA	C	coding	974	2925	19	2943	20.0	1	True	ATTAAA	-20
PB.7877.1	chr22	+	2216	5	novel_in_catalog	PIM3	novel	2369	6	NA	NA	-23	-4	intron_retention	TRUE	canonical	1	472965	junction_1	273192.83034012804	NA	14	1	TRUE	NA	NA	NA	C	coding	86	261	204	464	25.0	-1888	False	ATTAAA	-20
PB.1458.3	chr10	+	2123	1	novel_in_catalog	ANAPC16	novel	3100	3	NA	NA	-6	-15470	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	11	True	NA	NA
PB.1458.2	chr10	+	1133	4	novel_in_catalog	ANAPC16	novel	3100	3	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	1	354467	junction_1	537699.8535918219	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	92	424	25.0	-3	True	AATAAA	-17
PB.2144.2	chr11	-	1827	16	full-splice_match	CLPB	ENST00000538039.5	3078	16	393	858	126	-1	multi-exon	FALSE	canonical	1	73414	junction_14	70960.18071178293	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	73	1764	20.0	424	False	AATAAA	-22
PB.2144.3	chr11	-	2271	17	full-splice_match	CLPB	ENST00000294053.8	10170	17	91	7808	-23	0	multi-exon	FALSE	canonical	1	6982	junction_13	103081.93602146592	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	84	2207	20.0	-30	True	AATAAA	-23
PB.2144.4	chr11	-	2094	15	full-splice_match	CLPB	ENST00000340729.9	2071	15	-23	0	-23	0	multi-exon	FALSE	canonical	1	9776	junction_13	83105.17362885812	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	84	2030	20.0	-30	True	AATAAA	-23
PB.1458.5	chr10	+	2558	2	incomplete-splice_match	ANAPC16	ENST00000470481.2	1828	3	5499	80	5499	-80	5prime_fragment	FALSE	canonical	1	1670949	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	AATAAA	-21
PB.1458.4	chr10	+	1001	5	full-splice_match	ANAPC16	ENST00000621663.4	3567	5	35	2531	6	-288	multi-exon	FALSE	canonical	1	19	junction_1	651135.0828411106	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	458	790	40.0	23	True	TTTAAA	-5
PB.10350.1	chr7	+	2266	2	novel_not_in_catalog	AC147651.3	novel	731	2	NA	NA	1435	-5	any annotated donor/acceptor	FALSE	canonical	1	1390	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	A	coding	118	357	454	810	25.0	-27	True	CATAAA	-12
PB.3622.10	chr14	-	1838	10	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	1	41711	1	8131	3prime_fragment	FALSE	canonical	1	60673	junction_9	34751.53352971156	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1464	374	1837	50.0	-22	True	NA	NA
PB.3622.11	chr14	-	3617	7	incomplete-splice_match	TRIP11	ENST00000267622.8	9996	21	11	46156	11	3686	3prime_fragment	FALSE	canonical	1	60673	junction_6	38271.353964159665	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	364	1596	30.0	-12	True	AATAAA	-33
PB.10018.5	chr6	-	3560	22	full-splice_match	AARS2	ENST00000244571.4	3854	22	-30	324	-30	-324	multi-exon	FALSE	canonical	1	103995	junction_17	33573.22795508741	NA	1	NA	TRUE	NA	NA	NA	C	coding	985	2958	34	2991	35.0	-21	False	NA	NA
PB.664.7	chr1	-	2879	21	novel_not_in_catalog	NBPF15	novel	4272	19	NA	NA	12	1587	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	103.08796001473695	NA	4	NA	TRUE	NA	NA	NA	B	coding	569	1707	1171	2877	65.0	36	False	AAGAAA	-18
PB.9191.7	chr5	-	1762	8	full-splice_match	RICTOR	ENST00000513566.1	1762	8	1	-1	1	1	multi-exon	FALSE	canonical	1	104730	junction_7	37456.18975631697	NA	3	NA	TRUE	NA	NA	NA	C	coding	265	798	22	819	10.0	0	True	AATAAA	-12
PB.2045.1	chr11	-	3441	15	novel_in_catalog	SYVN1	novel	656	3	NA	NA	-7	2	intron_retention	FALSE	canonical	1	93459	junction_5	217361.29403388896	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	915	2336	15.0	438	False	AATAAA	-18
PB.1577.1	chr10	+	3785	9	full-splice_match	PI4K2A	ENST00000370631.3	4189	9	20	384	20	-384	multi-exon	FALSE	canonical	1	158092	junction_1	35624.54975768115	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	38	1477	10.0	-28	True	AATACA	-7
PB.2045.3	chr11	-	2915	15	novel_in_catalog	SYVN1	novel	656	3	NA	NA	-13	2	no_combination_of_known_junctions	FALSE	canonical	1	179	junction_14	270556.7059216392	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	140	1810	15.0	1	True	AATAAA	-18
PB.2045.4	chr11	-	3172	16	novel_not_in_catalog	SYVN1	novel	656	3	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	19325	junction_2	254474.3726992825	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	96	2105	10.0	445	False	AATAAA	-17
PB.2045.5	chr11	-	3105	15	novel_in_catalog	SYVN1	novel	656	3	NA	NA	16	-1	intron_retention	FALSE	canonical	1	93459	junction_4	223703.78138494544	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	79	2043	15.0	2	True	AATAAA	-12
PB.2045.6	chr11	-	4445	14	novel_in_catalog	SYVN1	novel	656	3	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	93459	junction_4	216129.23459208605	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	912	2162	20.0	441	False	AATAAA	-11
PB.2045.7	chr11	-	4053	15	novel_not_in_catalog	SYVN1	novel	656	3	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	410	junction_11	249089.98077386306	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	637	1770	20.0	3	True	AATAAA	-11
PB.2045.8	chr11	-	3242	16	novel_in_catalog	SYVN1	novel	656	3	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	10788	junction_15	253606.862260468	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	291	2144	20.0	-8	True	AATAAA	-11
PB.2045.9	chr11	-	3010	16	full-splice_match	SYVN1	ENST00000377190.7	3052	16	37	5	4	-2	multi-exon	FALSE	canonical	1	93459	junction_5	217221.5266983352	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	59	1912	20.0	-2	True	AATAAA	-11
PB.9025.2	chr4	+	4554	13	novel_in_catalog	FAM160A1	novel	604	4	NA	NA	-49	7	combination_of_known_junctions	FALSE	canonical	1	4061	junction_1	10599.248514700885	NA	2	1	TRUE	NA	NA	NA	C	coding	1039	3120	550	3669	15.0	-94	False	TATAAA	-26
PB.1055.5	chr1	-	4986	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	-66	307	-66	-307	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	713	2142	447	2588	25.0	5706	False	ATTAAA	-15
PB.10352.2	chr7	-	1386	10	novel_not_in_catalog	PRKAR1B	novel	2494	11	NA	NA	-34	813	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	223077.3641250668	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	85	1032	35.0	0	True	NA	NA
PB.10352.1	chr7	-	2473	11	full-splice_match	PRKAR1B	ENST00000537384.5	2533	11	60	0	-44	0	multi-exon	FALSE	canonical	1	87869	junction_10	152337.33491068432	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	95	1240	5.0	-10	True	ATTAAA	-16
PB.4271.12	chr16	+	2114	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-1	1421	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	141693.0365756366	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	93	1133	20.0	-1	True	AATAAA	-14
PB.2635.3	chr12	+	2449	1	incomplete-splice_match	SP1	ENST00000426431.2	7603	6	32552	807	31889	-807	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.2635.2	chr12	+	2917	1	incomplete-splice_match	SP1	ENST00000426431.2	7603	6	32882	9	32219	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	NA	False	ATTAAA	-10
PB.2635.1	chr12	+	2863	1	incomplete-splice_match	SP1	ENST00000426431.2	7603	6	32138	807	31475	-807	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.8104.2	chr3	-	1741	15	novel_in_catalog	IMPDH2	novel	469	3	NA	NA	-18	-6	combination_of_known_junctions	FALSE	canonical	1	61245	junction_6	1098986.6894293686	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	77	1693	50.0	-1	True	AATAAA	-8
PB.8104.3	chr3	-	1722	13	novel_in_catalog	IMPDH2	novel	469	3	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	2540165	junction_12	302376.1331378681	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	50	1492	50.0	-2	True	AATAAA	-8
PB.12313.3	chrX	+	1980	3	novel_not_in_catalog	MAGEA4	novel	854	4	NA	NA	31	-3	any annotated donor/acceptor	FALSE	canonical	1	70	junction_1	42296.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	478	1431	15.0	5369	False	AATAAA	-14
PB.8104.4	chr3	-	1642	14	full-splice_match	IMPDH2	ENST00000326739.8	1643	14	-9	10	-1	-6	multi-exon	FALSE	canonical	1	2540165	junction_13	326902.82258271246	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	50	1594	50.0	-2	True	AATAAA	-8
PB.8104.5	chr3	-	2359	12	incomplete-splice_match	IMPDH2	ENST00000326739.8	1643	14	-57	12	-39	6	intron_retention	FALSE	canonical	1	2738044	junction_1	280329.8318381049	NA	3	NA	TRUE	NA	NA	NA	C	coding	445	1338	976	2313	55.0	-22	True	AATAAA	-6
PB.2719.12	chr12	+	8391	34	novel_not_in_catalog	MON2	novel	10382	36	NA	NA	1	-1974	any annotated donor/acceptor	FALSE	canonical	0	0	junction_27	51487.68507521037	NA	5	1	TRUE	NA	NA	NA	C	coding	1407	4224	386	4609	25.0	-3	True	AATAAA	-17
PB.2719.13	chr12	+	7765	26	incomplete-splice_match	MON2	ENST00000393629.6	5612	34	-25	28404	1	-6962	3prime_fragment	FALSE	canonical	1	123716	junction_1	26610.992411527986	NA	3	NA	TRUE	NA	NA	NA	C	coding	1346	4041	386	4426	70.0	-3	True	ATTAAA	-31
PB.2719.10	chr12	+	5881	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-26	-243	0	27	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	3	NA	TRUE	NA	NA	NA	C	coding	1711	5136	387	5522	25.0	-4	True	AAAAAG	-22
PB.2719.11	chr12	+	6124	35	novel_in_catalog	MON2	novel	10382	36	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	8331	junction_2	58109.049008848895	NA	0	NA	TRUE	NA	NA	NA	C	coding	1639	4920	680	5599	45.0	-3	True	AATAAA	-17
PB.2719.14	chr12	+	6812	34	full-splice_match	MON2	ENST00000393629.6	5612	34	-24	-1176	2	763	multi-exon	FALSE	canonical	1	96698	junction_27	43514.15955130447	NA	0	NA	TRUE	NA	NA	NA	C	coding	1711	5136	385	5520	20.0	-2	True	NA	NA
PB.2719.15	chr12	+	5939	33	novel_not_in_catalog	MON2	novel	10382	36	NA	NA	-8	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_26	59862.67033529222	NA	5	1	TRUE	NA	NA	NA	C	coding	1373	4122	373	4494	40.0	10	True	AATAAA	-15
PB.8085.2	chr3	+	3640	6	novel_not_in_catalog	ZNF589	novel	3368	4	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	718	junction_2	44085.634651664026	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	351	1439	25.0	7	True	NA	NA
PB.8085.3	chr3	+	3302	4	full-splice_match	ZNF589	ENST00000354698.7	3368	4	66	0	11	0	multi-exon	FALSE	canonical	1	72493	junction_2	14043.19494353839	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	7	1101	25.0	43	False	NA	NA
PB.8085.1	chr3	+	3276	3	novel_in_catalog	ZNF589	novel	3368	4	NA	NA	-35	0	no_combination_of_known_junctions	FALSE	canonical	1	1488	junction_2	47923.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	121	366	108	473	25.0	-12	True	NA	NA
PB.12313.6	chrX	+	1604	3	full-splice_match	MAGEA4	ENST00000431971.1	997	3	60	-667	60	-115	multi-exon	FALSE	canonical	1	614	junction_1	42024.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	214	1167	15.0	6073	False	ATTAAA	-16
PB.8085.4	chr3	+	3575	6	novel_not_in_catalog	ZNF589	novel	3368	4	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	7503	junction_2	42682.6086859742	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	286	1374	25.0	0	True	NA	NA
PB.8534.3	chr3	+	1809	14	full-splice_match	ACTL6A	ENST00000429709.6	1901	14	84	8	5	2	multi-exon	FALSE	canonical	1	358668	junction_1	185956.4427987556	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	130	1419	30.0	38	True	AATAAA	-16
PB.2174.6	chr11	+	2659	15	full-splice_match	UVRAG	ENST00000356136.7	4123	15	38	1426	38	-14	multi-exon	FALSE	canonical	1	125686	junction_1	42021.29457380107	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	204	2303	25.0	-5	True	TATAAA	-16
PB.6579.2	chr2	-	2734	2	antisense	novelGene_LINC01291_AS_novelGene_POLE4_AS_novelGene_LINC01293_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6136	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	99	300	999	1298	20.0	3	True	NA	NA
PB.3236.3	chr13	-	1801	3	novel_not_in_catalog	GPR183	novel	1700	2	NA	NA	6	-11	any annotated donor/acceptor	FALSE	canonical	1	5789	junction_2	1087.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	197	1282	20.0	-2	True	AATAAA	-16
PB.3236.2	chr13	-	1683	2	full-splice_match	GPR183	ENST00000376414.4	1700	2	6	11	6	-11	multi-exon	FALSE	canonical	1	354925	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	79	1164	20.0	-2	True	AATAAA	-16
PB.3236.1	chr13	-	3900	2	full-splice_match	GPR183	ENST00000376414.4	1700	2	6	-2206	6	2206	multi-exon	FALSE	canonical	1	354925	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	79	1164	90.0	-2	True	NA	NA
PB.3236.5	chr13	-	1280	2	full-splice_match	GPR183	ENST00000376414.4	1700	2	-20	440	-20	-440	multi-exon	FALSE	canonical	1	354925	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	105	1190	30.0	-1	True	TATAAA	-23
PB.3236.4	chr13	-	1570	2	full-splice_match	GPR183	ENST00000376414.4	1700	2	-84	214	-84	-214	multi-exon	FALSE	canonical	1	354925	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	169	1254	45.0	5089	False	AATAAA	-28
PB.9185.1	chr5	-	3592	18	incomplete-splice_match	CPLANE1	ENST00000425232.6	11199	52	39	98976	39	-10	3prime_fragment	TRUE	canonical	1	18055	junction_17	19350.90300138105	NA	0	NA	TRUE	NA	NA	NA	A	coding	1110	3333	193	3525	55.0	-27	True	AATAAA	-7
PB.1055.8	chr1	-	3331	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	-70	1966	-70	-1966	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	451	2592	20.0	5702	False	AATATA	-14
PB.10465.14	chr7	-	4950	7	full-splice_match	SCRN1	ENST00000425819.6	1552	7	-119	-3279	-33	-179	multi-exon	FALSE	canonical	1	8656	junction_6	233804.38836414798	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	236	1276	80.0	-71	True	TTTAAA	-31
PB.10465.15	chr7	-	4233	3	novel_not_in_catalog	SCRN1	novel	5257	8	NA	NA	36833	-179	any annotated donor/acceptor	FALSE	canonical	1	1406	junction_2	312801.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	TTTAAA	-31
PB.3395.1	chr14	+	1180	10	full-splice_match	GEMIN2	ENST00000308317.10	1420	10	100	140	0	58	multi-exon	FALSE	canonical	1	45390	junction_4	51173.67927140708	NA	0	NA	TRUE	NA	NA	NA	A	coding	269	810	17	826	35.0	0	True	TATAAA	-10
PB.10465.17	chr7	-	1517	8	full-splice_match	SCRN1	ENST00000242059.9	5257	8	-17	3757	-17	-3	multi-exon	FALSE	canonical	1	209205	junction_7	160764.72803168625	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	176	1420	15.0	-55	True	AGTAAA	-11
PB.10465.10	chr7	-	5365	9	novel_not_in_catalog	SCRN1	novel	5257	8	NA	NA	-46	-26	any annotated donor/acceptor	FALSE	canonical	1	6374	junction_7	271885.73788355355	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	498	1538	70.0	-84	True	NA	NA
PB.1567.1	chr10	+	4298	1	incomplete-splice_match	LCOR	ENST00000371103.8	10342	8	127860	2	10919	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-4115	False	AATAAA	-19
PB.1567.2	chr10	+	2807	1	incomplete-splice_match	LCOR	ENST00000371103.8	10342	8	129342	11	12401	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-2633	False	AATAAA	-10
PB.10465.13	chr7	-	5087	8	full-splice_match	SCRN1	ENST00000242059.9	5257	8	-3	173	-3	-172	multi-exon	FALSE	canonical	1	209205	junction_7	160764.72803168625	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	162	1406	80.0	-41	True	TTTAAA	-38
PB.3083.24	chr13	-	1866	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	572	1946	572	-1946	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	575	928	70.0	0	True	NA	NA
PB.3083.25	chr13	-	1768	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	342	2274	342	-2274	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	805	1158	50.0	0	True	ACTAAA	-32
PB.3083.26	chr13	-	1518	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	343	2523	343	-2523	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	804	1157	40.0	1	True	AATAAA	-26
PB.2359.3	chr11	+	1646	8	novel_in_catalog	FAM118B	novel	2402	9	NA	NA	1	21	combination_of_known_junctions	FALSE	canonical	1	17910	junction_1	73057.93359061434	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	72	1127	15.0	-2762	False	ATTAAA	-21
PB.3083.20	chr13	-	2030	5	novel_not_in_catalog	UBL3	novel	4384	5	NA	NA	8655	-1241	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	253655.57040244061	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	8677	False	AATAAA	-17
PB.8461.17	chr3	-	4702	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	5	-286	any annotated donor/acceptor	FALSE	canonical	1	12859	junction_6	185930.3763524281	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	216	1418	65.0	-12	True	NA	NA
PB.3083.22	chr13	-	2441	5	full-splice_match	UBL3	ENST00000380680.4	4384	5	393	1550	393	-1550	multi-exon	FALSE	canonical	1	473439	junction_4	53456.59914360434	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	754	1107	40.0	51	True	TATAAA	-17
PB.896.4	chr1	-	2025	11	full-splice_match	ALDH9A1	ENST00000354775.4	2696	11	301	370	-22	189	multi-exon	FALSE	canonical	1	390244	junction_10	218185.58632723655	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	77	1561	85.0	-1	True	NA	NA
PB.8755.20	chr4	+	3417	7	full-splice_match	TMEM33	ENST00000504986.5	7482	7	18	4047	9	1668	multi-exon	FALSE	canonical	1	485459	junction_1	70726.9558971134	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	402	1091	20.0	1	True	TTTAAA	-17
PB.6631.5	chr2	-	3077	4	full-splice_match	TMEM127	ENST00000432959.1	3099	4	-19	41	-19	-41	multi-exon	FALSE	canonical	1	96947	junction_3	195964.6323367788	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	254	970	75.0	-17	True	TATAAA	-28
PB.6631.4	chr2	-	3839	4	full-splice_match	TMEM127	ENST00000432959.1	3099	4	4	-744	4	744	multi-exon	FALSE	canonical	1	96947	junction_3	195964.6323367788	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	231	947	20.0	6	True	TTTAAA	-9
PB.6631.3	chr2	-	3880	4	full-splice_match	TMEM127	ENST00000258439.7	6266	4	-14	2400	-14	744	multi-exon	FALSE	canonical	1	115927	junction_3	187163.44339818784	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	272	988	20.0	-12	True	TTTAAA	-9
PB.8396.12	chr3	-	3667	9	incomplete-splice_match	PIK3R4	ENST00000356763.7	5015	20	0	36683	0	799	3prime_fragment	FALSE	canonical	1	128251	junction_8	12651.711304701037	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	559	2958	65.0	-7	True	NA	NA
PB.6631.1	chr2	-	4194	4	full-splice_match	TMEM127	ENST00000432959.1	3099	4	-11	-1084	-11	1084	multi-exon	FALSE	canonical	1	96947	junction_3	195964.6323367788	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	246	962	20.0	-9	True	AATACA	-13
PB.8827.36	chr4	-	2706	12	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-5	17	combination_of_known_junctions	FALSE	canonical	1	84195	junction_11	544277.957199921	NA	1	NA	TRUE	NA	NA	NA	C	coding	482	1449	200	1648	20.0	-78	True	AGTAAA	-19
PB.4555.1	chr16	-	1242	7	full-splice_match	CFDP1	ENST00000283882.3	1275	7	-13	46	-13	-46	multi-exon	FALSE	canonical	1	704798	junction_6	119720.38568739616	NA	0	NA	TRUE	NA	NA	NA	A	coding	299	900	147	1046	65.0	2	True	TTTAAA	-17
PB.810.7	chr1	+	3803	5	novel_not_in_catalog	SYT11	novel	5240	4	NA	NA	61	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	179530.35297460845	NA	2	1	TRUE	NA	NA	NA	C	coding	431	1296	193	1488	25.0	3	True	AATAAA	-23
PB.11231.2	chr8	-	2132	2	full-splice_match	OTUD6B-AS1	ENST00000524003.1	2171	2	32	7	32	-7	multi-exon	FALSE	canonical	1	474564	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-9	False	ATTAAA	-12
PB.11231.3	chr8	-	1656	2	full-splice_match	OTUD6B-AS1	ENST00000524003.1	2171	2	42	473	-24	-473	multi-exon	FALSE	canonical	1	474564	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1	True	AATATA	-18
PB.9249.3	chr5	+	4965	8	novel_not_in_catalog	RNF180	novel	1727	5	NA	NA	-8	-5	any annotated donor/acceptor	FALSE	canonical	1	1236	junction_5	13106.41021385633	NA	2	NA	TRUE	NA	NA	NA	C	coding	598	1797	119	1915	50.0	-43	True	AATAAA	-15
PB.810.6	chr1	+	2973	4	full-splice_match	SYT11	ENST00000368324.4	5240	4	29	2238	29	-2238	multi-exon	FALSE	canonical	1	309058	junction_1	71442.85712993909	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	225	1520	55.0	-8729	False	AATAAA	-13
PB.429.2	chr1	+	2378	10	full-splice_match	TTC4	ENST00000371281.3	2395	10	13	4	13	-4	multi-exon	FALSE	canonical	1	61550	junction_7	59595.24581978824	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	75	1238	40.0	-734	False	AGTAAA	-22
PB.810.1	chr1	+	3820	5	novel_not_in_catalog	SYT11	novel	5240	4	NA	NA	-22	-153	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	179530.35297460845	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	276	1571	80.0	-8780	False	AATAAA	-20
PB.5206.4	chr17	+	2554	12	full-splice_match	ARSG	ENST00000621439.4	2599	12	-1	46	-1	28	multi-exon	FALSE	canonical	1	16468	junction_1	12446.201306369654	NA	1	1	TRUE	NA	NA	NA	C	coding	525	1578	627	2204	40.0	-14	True	NA	NA
PB.5206.5	chr17	+	2339	9	novel_not_in_catalog	ARSG	novel	4642	12	NA	NA	11	20893	any annotated donor/acceptor	FALSE	canonical	1	4162	junction_8	20141.87745679074	NA	1	1	TRUE	NA	NA	NA	C	coding	329	990	615	1604	20.0	-2	True	NA	NA
PB.5206.1	chr17	+	2986	13	novel_in_catalog	ARSG	novel	4642	12	NA	NA	-54	6639	no_combination_of_known_junctions	TRUE	canonical	1	9140	junction_12	16782.572539856803	NA	1	1	TRUE	NA	NA	NA	C	coding	525	1578	632	2209	35.0	155	False	AATAAA	-16
PB.5206.2	chr17	+	3166	12	full-splice_match	ARSG	ENST00000621439.4	2599	12	-170	-397	-166	397	multi-exon	FALSE	canonical	1	16468	junction_1	12446.201306369654	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	796	2373	65.0	-920	False	NA	NA
PB.5206.3	chr17	+	2476	11	novel_in_catalog	ARSG	novel	4642	12	NA	NA	-40	28	no_combination_of_known_junctions	FALSE	canonical	1	3144	junction_9	18452.948337867314	NA	1	1	TRUE	NA	NA	NA	C	coding	413	1242	670	1911	40.0	-794	False	NA	NA
PB.3575.4	chr14	+	3647	10	full-splice_match	FLVCR2	ENST00000238667.8	3632	10	-18	3	-18	-3	multi-exon	FALSE	canonical	1	37371	junction_1	15197.79361016868	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	375	1955	25.0	-26	True	AATAAA	-11
PB.3575.3	chr14	+	2609	10	full-splice_match	FLVCR2	ENST00000238667.8	3632	10	-31	1054	-31	-37	multi-exon	FALSE	canonical	1	37371	junction_1	15197.79361016868	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	388	1968	20.0	-103	False	AATAAA	-15
PB.3575.2	chr14	+	2705	9	novel_not_in_catalog	FLVCR2	novel	3632	10	NA	NA	-363	-5	any annotated donor/acceptor	FALSE	canonical	1	651	junction_1	27943.221761949713	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	161	1015	25.0	-435	False	AATAAA	-9
PB.3575.1	chr14	+	2860	10	novel_not_in_catalog	FLVCR2	novel	3632	10	NA	NA	-375	-3	any annotated donor/acceptor	FALSE	canonical	1	651	junction_1	22148.23568482639	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	173	1168	25.0	-447	False	AATAAA	-11
PB.379.24	chr1	-	2179	10	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	25	-188	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	256623.52780207086	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	308	1417	15.0	-35	True	AATAAA	-14
PB.8825.7	chr4	+	5495	6	full-splice_match	THAP6	ENST00000507556.5	1134	6	0	-4361	0	2658	multi-exon	FALSE	canonical	1	13084	junction_4	42039.019536616215	NA	34	1	TRUE	NA	NA	NA	C	coding	160	483	69	551	65.0	0	True	NA	NA
PB.379.25	chr1	-	3280	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	34	-299	combination_of_known_junctions	FALSE	canonical	1	112552	junction_11	207349.59014246432	NA	4	NA	TRUE	NA	NA	NA	C	coding	474	1425	1205	2629	40.0	-26	True	TATAAA	-23
PB.8975.6	chr4	+	3244	19	full-splice_match	HSPA4L	ENST00000296464.8	10790	19	182	7364	0	327	multi-exon	FALSE	canonical	1	116967	junction_2	33808.60775635163	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	230	2749	40.0	0	True	ATTAAA	-19
PB.8975.7	chr4	+	2846	19	full-splice_match	HSPA4L	ENST00000296464.8	10790	19	182	7762	0	3	multi-exon	FALSE	canonical	1	116967	junction_2	33808.60775635163	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	230	2749	15.0	0	True	NA	NA
PB.8975.4	chr4	+	3883	19	full-splice_match	HSPA4L	ENST00000296464.8	10790	19	182	6725	0	966	multi-exon	FALSE	canonical	1	116967	junction_2	33808.60775635163	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	230	2749	20.0	0	True	ATTAAA	-32
PB.8975.5	chr4	+	3572	19	full-splice_match	HSPA4L	ENST00000296464.8	10790	19	425	6793	243	898	multi-exon	FALSE	canonical	1	116967	junction_2	33808.60775635163	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	266	2506	55.0	214	False	AATAAA	-27
PB.8975.2	chr4	+	5625	19	full-splice_match	HSPA4L	ENST00000296464.8	10790	19	134	5031	-48	2660	multi-exon	FALSE	canonical	1	116967	junction_2	33808.60775635163	NA	2	NA	TRUE	NA	NA	NA	C	coding	839	2520	278	2797	75.0	-48	True	NA	NA
PB.8827.34	chr4	-	2712	12	full-splice_match	G3BP2	ENST00000359707.8	4883	12	554	1617	-14	-10	multi-exon	FALSE	canonical	1	173938	junction_4	492708.8761422128	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	233	1681	45.0	-5	True	TATAAA	-19
PB.8975.1	chr4	+	1997	14	incomplete-splice_match	HSPA4L	ENST00000508776.5	3020	20	449	12573	-52	0	internal_fragment	FALSE	canonical	1	116967	junction_2	24054.412914038316	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1716	282	1997	70.0	-81	False	ATTAAA	-11
PB.7027.3	chr2	-	2014	2	full-splice_match	TUBA4A	ENST00000475683.1	753	2	-2	-1259	-2	449	multi-exon	FALSE	canonical	1	1184340	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	899	1942	5.0	-1	True	AATAAA	-18
PB.5708.9	chr19	+	2323	17	incomplete-splice_match	SLC44A2	ENST00000335757.9	3671	22	6012	647	-436	-218	5prime_fragment	FALSE	canonical	1	794502	junction_1	191772.29231979745	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	225	1796	15.0	-5279	False	ATTAAA	-17
PB.3522.10	chr14	-	3592	21	novel_in_catalog	ACTN1	novel	3779	21	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	6551	junction_1	551138.4765807296	NA	4	NA	TRUE	NA	NA	NA	C	coding	935	2808	244	3051	30.0	2	True	ATTAAA	-18
PB.11546.1	chr9	+	1841	12	full-splice_match	POLR1E	ENST00000377798.8	1868	12	26	1	13	-1	multi-exon	FALSE	canonical	1	369584	junction_2	47635.90654742535	NA	0	NA	TRUE	NA	NA	NA	A	coding	419	1260	88	1347	15.0	13	True	TATAAA	-22
PB.18.24	chr1	-	4626	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-11	6	intron_retention	FALSE	canonical	1	38336	junction_3	499512.4269008035	NA	10	NA	TRUE	NA	NA	NA	C	coding	226	681	34	714	45.0	-26	True	AATAAA	-26
PB.5708.3	chr19	+	3447	21	novel_in_catalog	SLC44A2	novel	586	7	NA	NA	-1	1	intron_retention	FALSE	canonical	1	308275	junction_1	278600.25417082355	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	1056	2276	5.0	-1	True	AATAAA	-18
PB.5708.2	chr19	+	3364	22	full-splice_match	SLC44A2	ENST00000407327.8	3301	22	-55	-8	-2	1	multi-exon	FALSE	canonical	1	308275	junction_1	278211.9228801675	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	77	2191	5.0	-2	True	AATAAA	-20
PB.5708.1	chr19	+	3288	19	novel_in_catalog	SLC44A2	novel	586	7	NA	NA	-20	1	intron_retention	TRUE	canonical	1	7407	junction_11	368942.6137221557	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	1350	2117	5.0	-20	True	AATAAA	-18
PB.7037.33	chr2	+	3110	16	novel_not_in_catalog	ACSL3	novel	5679	17	NA	NA	10	4	any annotated donor/acceptor	FALSE	canonical	1	9822	junction_11	307353.2713999316	NA	2	1	TRUE	NA	NA	NA	C	coding	507	1524	356	1879	30.0	0	True	AATAAA	-30
PB.5708.7	chr19	+	3057	22	novel_in_catalog	SLC44A2	novel	586	7	NA	NA	-12	-218	intron_retention	FALSE	canonical	1	102322	junction_21	339105.6557470105	NA	2	1	TRUE	NA	NA	NA	C	coding	709	2130	34	2163	15.0	41	True	ATTAAA	-17
PB.5708.6	chr19	+	2694	22	full-splice_match	SLC44A2	ENST00000407327.8	3301	22	-27	634	26	-214	multi-exon	FALSE	canonical	1	308275	junction_1	278211.9228801675	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	49	2163	20.0	26	True	ATTAAA	-21
PB.5708.5	chr19	+	2871	22	novel_not_in_catalog	SLC44A2	novel	586	7	NA	NA	25	-218	intron_retention	FALSE	canonical	1	1194	junction_13	404598.12153005705	NA	9	2	TRUE	NA	NA	NA	C	coding	255	768	1577	2344	15.0	25	True	ATTAAA	-17
PB.3738.1	chr15	-	1471	1	antisense	novelGene_HERC2P9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9157.19	chr5	-	2472	22	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	603	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	105377.6481772133	NA	0	NA	TRUE	NA	NA	NA	B	coding	750	2250	222	2471	70.0	929	False	NA	NA
PB.9157.18	chr5	-	2895	22	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-1	20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	102170.10685994824	NA	2	NA	TRUE	NA	NA	NA	B	coding	813	2439	457	2895	60.0	0	True	AAGAAA	-18
PB.9157.15	chr5	-	2908	21	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-30	21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	106930.08597579075	NA	0	NA	TRUE	NA	NA	NA	B	coding	803	2409	499	2907	60.0	-42	True	AAGAAA	-19
PB.9157.14	chr5	-	2712	22	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-129	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	86306.56399832679	NA	1	NA	TRUE	NA	NA	NA	B	coding	817	2451	260	2710	65.0	197	False	NA	NA
PB.9157.17	chr5	-	2857	21	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-10	20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	106991.41681957484	NA	0	NA	TRUE	NA	NA	NA	B	coding	793	2379	479	2857	60.0	-22	True	AAGAAA	-18
PB.9157.16	chr5	-	2880	21	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-14	21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	108744.60607883042	NA	0	NA	TRUE	NA	NA	NA	B	coding	799	2397	483	2879	60.0	-26	True	AAGAAA	-19
PB.9157.13	chr5	-	3105	24	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	0	1219	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	84876.22632372697	NA	0	NA	TRUE	NA	NA	NA	B	coding	879	2637	469	3105	65.0	-12	True	NA	NA
PB.9157.12	chr5	-	7312	40	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-10	345	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_34	92186.1129807147	NA	0	NA	TRUE	NA	NA	NA	B	coding	2058	6177	479	6655	40.0	-22	True	ATTAAA	-11
PB.5210.19	chr17	+	3551	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	32	673	-8	-1	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	2	NA	TRUE	NA	NA	NA	C	coding	381	1146	97	1242	45.0	29	True	AATAAA	-17
PB.5210.18	chr17	+	3353	11	full-splice_match	PRKAR1A	ENST00000392711.5	4327	11	37	937	0	-273	multi-exon	FALSE	canonical	1	20648	junction_1	713035.4644261672	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	171	1316	25.0	-14	True	ATTAAA	-40
PB.303.7	chr1	-	1575	14	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	31	113	no_combination_of_known_junctions	FALSE	canonical	1	16042	junction_5	204633.81707352976	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	80	1339	25.0	-23	True	AATAAA	-25
PB.5210.11	chr17	+	3039	11	full-splice_match	PRKAR1A	ENST00000589228.5	4256	11	-11	1228	0	-556	multi-exon	FALSE	canonical	1	722815	junction_1	538749.9204505649	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	140	1285	75.0	-14	True	NA	NA
PB.5210.10	chr17	+	4399	10	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98667	7810	intron_retention	FALSE	canonical	1	722815	junction_1	545634.0546418575	NA	3	NA	TRUE	NA	NA	NA	B	coding	205	618	149	766	45.0	-23	True	AATAAA	-18
PB.5210.13	chr17	+	2409	1	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98670	-10131	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-20	True	AATAAA	-19
PB.5210.12	chr17	+	3675	11	novel_not_in_catalog	AC007780.1	novel	719	6	NA	NA	98670	7817	any annotated donor/acceptor	FALSE	canonical	1	414	junction_10	781257.6526373358	NA	1	NA	TRUE	NA	NA	NA	B	coding	347	1044	146	1189	30.0	-20	True	AATAAA	-25
PB.5210.15	chr17	+	3224	7	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98674	7809	no_combination_of_known_junctions	FALSE	canonical	1	450	junction_2	954391.4262335652	NA	19	NA	TRUE	NA	NA	NA	B	coding	257	774	142	915	45.0	-16	True	AATAAA	-17
PB.5210.14	chr17	+	3111	12	full-splice_match	PRKAR1A	ENST00000536854.6	3697	12	-38	624	-3	-621	multi-exon	FALSE	canonical	1	17540	junction_1	859381.9360246186	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	277	1422	55.0	-18	True	AAGAAA	-30
PB.5210.17	chr17	+	3548	11	novel_in_catalog	AC007780.1	novel	719	6	NA	NA	98676	7816	no_combination_of_known_junctions	FALSE	canonical	1	4863	junction_1	717177.8298758892	NA	0	NA	TRUE	NA	NA	NA	B	coding	381	1146	87	1232	30.0	-14	True	AATAAA	-24
PB.5210.16	chr17	+	3879	10	incomplete-splice_match	PRKAR1A	ENST00000589228.5	4256	11	-12	664	0	5	intron_retention	FALSE	canonical	1	722815	junction_1	555466.5065653163	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	141	1190	30.0	-15	True	AATAAA	-26
PB.3899.1	chr15	+	4454	14	full-splice_match	RNF111	ENST00000348370.8	5913	14	-2	1461	-2	447	multi-exon	FALSE	canonical	1	101488	junction_1	34098.43174515934	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	436	3396	15.0	-13	True	AATAAA	-14
PB.3899.2	chr15	+	4970	14	novel_not_in_catalog	RNF111	novel	541	2	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	31658	junction_8	57241.30463812435	NA	0	NA	TRUE	NA	NA	NA	C	coding	1002	3009	431	3439	20.0	-8	True	AATAAA	-21
PB.3899.3	chr15	+	5816	14	full-splice_match	RNF111	ENST00000348370.8	5913	14	8	89	8	-89	multi-exon	FALSE	canonical	1	101488	junction_1	34098.43174515934	NA	1	NA	TRUE	NA	NA	NA	C	coding	986	2961	426	3386	10.0	-3	True	GATAAA	-19
PB.3899.4	chr15	+	4491	14	novel_in_catalog	RNF111	novel	541	2	NA	NA	-10	447	combination_of_known_junctions	FALSE	canonical	1	31658	junction_8	56186.8428473066	NA	7	2	TRUE	NA	NA	NA	C	coding	1003	3012	422	3433	15.0	1	True	AATAAA	-14
PB.3899.5	chr15	+	4903	14	full-splice_match	RNF111	ENST00000348370.8	5913	14	16	994	-6	1	multi-exon	FALSE	canonical	1	101488	junction_1	34098.43174515934	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	418	3378	20.0	5	True	AATAAA	-15
PB.3899.6	chr15	+	5360	8	incomplete-splice_match	RNF111	ENST00000559209.5	5278	14	-275	13118	0	-428	3prime_fragment	FALSE	canonical	1	101488	junction_1	34768.2147000471	NA	2	NA	TRUE	NA	NA	NA	C	coding	771	2316	412	2727	20.0	11	True	AATAAA	-19
PB.3899.7	chr15	+	4916	14	novel_in_catalog	RNF111	novel	541	2	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	85982	junction_12	41645.20246561861	NA	1	1	TRUE	NA	NA	NA	C	coding	994	2985	401	3385	20.0	-7	True	AATAAA	-21
PB.3899.8	chr15	+	5816	14	full-splice_match	RNF111	ENST00000559209.5	5278	14	-262	-276	13	-89	multi-exon	FALSE	canonical	1	31658	junction_8	51684.87611231706	NA	1	NA	TRUE	NA	NA	NA	C	coding	995	2988	399	3386	10.0	-5	True	GATAAA	-19
PB.3899.9	chr15	+	4677	7	incomplete-splice_match	RNF111	ENST00000559209.5	5278	14	-257	18503	18	-5813	3prime_fragment	FALSE	canonical	1	101488	junction_1	37073.31796439171	NA	1	NA	TRUE	NA	NA	NA	C	coding	659	1980	394	2373	95.0	0	True	NA	NA
PB.6308.1	chr2	+	4044	4	full-splice_match	KLF11	ENST00000305883.5	4030	4	-14	0	-14	0	multi-exon	TRUE	canonical	1	49024	junction_1	35540.09914011058	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	228	1715	10.0	-31	True	TATAAA	-17
PB.6362.6	chr2	+	1645	16	full-splice_match	HADHB	ENST00000317799.9	2044	16	29	370	-2	-314	multi-exon	FALSE	canonical	1	205276	junction_1	411991.3117748102	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	76	1500	20.0	-15	True	ATTAAA	-13
PB.6362.7	chr2	+	1903	16	full-splice_match	HADHB	ENST00000317799.9	2044	16	32	109	1	-53	multi-exon	FALSE	canonical	1	205276	junction_1	411991.3117748102	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	73	1497	55.0	-12	True	TATAAA	-23
PB.6362.4	chr2	+	2131	16	novel_not_in_catalog	HADHB	novel	557	8	NA	NA	1	-2150	any annotated donor/acceptor	FALSE	canonical	1	5991	junction_15	474480.07441078307	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	79	1482	70.0	-18	True	NA	NA
PB.10941.4	chr7	-	3304	8	incomplete-splice_match	KMT2C	ENST00000424877.5	5874	18	14501	-374	6172	-230	5prime_fragment	FALSE	canonical	1	195977	junction_5	79527.87707952168	NA	0	NA	TRUE	NA	NA	NA	B	coding	448	1347	285	1631	45.0	NA	False	AATAAA	-25
PB.1456.1	chr10	-	2956	7	full-splice_match	VSIR	ENST00000394957.7	4689	7	-22	1755	-22	1602	multi-exon	FALSE	canonical	1	427828	junction_6	177140.10122844073	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	82	1017	75.0	-1	True	NA	NA
PB.1456.2	chr10	-	1965	7	full-splice_match	VSIR	ENST00000394957.7	4689	7	-23	2747	-23	610	multi-exon	FALSE	canonical	1	427828	junction_6	177140.10122844073	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	83	1018	35.0	-2	True	NA	NA
PB.1022.29	chr1	+	4004	30	full-splice_match	PTPRC	ENST00000348564.11	4753	30	109	640	4	-640	multi-exon	FALSE	canonical	1	214755	junction_3	339037.8226913115	NA	1	NA	TRUE	NA	NA	NA	C	coding	1145	3438	105	3542	35.0	-18	True	AATAAA	-17
PB.6079.1	chr19	-	3125	13	full-splice_match	PPP1R13L	ENST00000360957.9	3104	13	-28	7	-3	-3	multi-exon	TRUE	canonical	1	50165	junction_6	68830.15411075093	NA	0	NA	TRUE	NA	NA	NA	A	coding	828	2487	90	2576	20.0	-8	True	AATAAA	-15
PB.5413.6	chr18	-	3372	22	incomplete-splice_match	ROCK1	ENST00000635540.1	5656	34	-660	30010	171	-10004	3prime_fragment	FALSE	canonical	1	264009	junction_20	96269.66304778123	NA	0	NA	TRUE	NA	NA	NA	B	coding	867	2601	771	3371	75.0	-3	True	TATAAA	-32
PB.1579.1	chr10	+	2602	2	full-splice_match	MARVELD1	ENST00000285605.7	3221	2	615	4	-355	-4	multi-exon	FALSE	canonical	1	292644	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	0.0	389	False	GATAAA	-19
PB.5413.1	chr18	-	4725	27	incomplete-splice_match	ROCK1	ENST00000399799.2	9484	33	69263	3022	6623	24	5prime_fragment	TRUE	canonical	1	76317	junction_2	129449.80065483086	NA	1	NA	TRUE	NA	NA	NA	B	coding	1084	3255	15	3269	25.0	NA	False	AATAAA	-19
PB.2948.18	chr12	-	2944	7	novel_not_in_catalog	PXN	novel	3835	11	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_5	377695.0405987467	NA	10	1	TRUE	NA	NA	NA	C	coding	255	768	311	1078	15.0	-1	True	AATAAA	-18
PB.8827.33	chr4	-	3146	11	full-splice_match	G3BP2	ENST00000357854.7	2609	11	-9	-528	-9	528	multi-exon	FALSE	canonical	1	548579	junction_10	337629.79774865846	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	228	1577	25.0	0	True	AGTAAA	-25
PB.2948.14	chr12	-	3736	12	novel_in_catalog	PXN	novel	3835	11	NA	NA	-3	0	intron_retention	FALSE	canonical	1	9178	junction_11	360953.9844304921	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	596	1870	15.0	-11	True	AATAAA	-18
PB.2948.15	chr12	-	3640	11	full-splice_match	PXN	ENST00000424649.6	3683	11	42	1	8	0	multi-exon	FALSE	canonical	1	355437	junction_10	240586.86956274236	NA	4	NA	TRUE	NA	NA	NA	C	coding	557	1674	101	1774	15.0	0	True	AATAAA	-18
PB.2948.12	chr12	-	3743	12	full-splice_match	PXN	ENST00000228307.11	3785	12	41	1	7	0	multi-exon	FALSE	canonical	1	98470	junction_6	338086.66462428955	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	102	1877	15.0	-1	True	AATAAA	-18
PB.2948.13	chr12	-	3796	12	novel_not_in_catalog	PXN	novel	3835	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	12686	junction_1	385492.7972384533	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	101	1642	15.0	0	True	AATAAA	-18
PB.2948.10	chr12	-	3918	12	novel_in_catalog	PXN	novel	3835	11	NA	NA	10	0	intron_retention	FALSE	canonical	1	31380	junction_5	349079.00256932294	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	133	2052	15.0	-32	False	AATAAA	-18
PB.2948.11	chr12	-	3826	13	novel_in_catalog	PXN	novel	3835	11	NA	NA	9	0	intron_retention	FALSE	canonical	1	9178	junction_12	403396.0107659149	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	584	1960	15.0	1	True	AATAAA	-18
PB.3885.7	chr15	-	2872	7	novel_in_catalog	CCPG1	novel	663	3	NA	NA	1	-7	intron_retention	FALSE	canonical	1	3341	junction_1	198783.34588224156	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	825	2219	45.0	15	True	AATAAA	-15
PB.3885.6	chr15	-	2988	8	full-splice_match	CCPG1	ENST00000310958.10	6822	8	234	3600	3	-11	multi-exon	FALSE	canonical	1	323777	junction_7	93981.48656050536	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	66	2339	50.0	17	True	AATAAA	-11
PB.3885.5	chr15	-	3132	8	full-splice_match	CCPG1	ENST00000569205.5	2970	8	10	-172	10	-7	multi-exon	FALSE	canonical	1	50875	junction_7	176926.67328297222	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	206	2479	45.0	17	True	AATAAA	-15
PB.3885.4	chr15	-	5731	8	full-splice_match	CCPG1	ENST00000310958.10	6822	8	211	880	7	-2	multi-exon	FALSE	canonical	1	323777	junction_7	93981.48656050536	NA	4	NA	TRUE	NA	NA	NA	C	coding	757	2274	89	2362	15.0	-6	True	AATGAA	-13
PB.3885.3	chr15	-	3122	9	full-splice_match	CCPG1	ENST00000442196.7	3453	9	-74	405	-27	1	multi-exon	FALSE	canonical	1	169332	junction_1	139029.37195197056	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	123	2546	40.0	25	True	AATAAA	-15
PB.8463.11	chr3	+	1699	11	novel_not_in_catalog	RNF13	novel	2843	10	NA	NA	-5	-20	any annotated donor/acceptor	FALSE	canonical	1	1849	junction_5	162507.0318456712	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	907	1449	90.0	-5	True	AATGAA	-10
PB.3885.1	chr15	-	3561	9	full-splice_match	CCPG1	ENST00000442196.7	3453	9	-109	1	3	-1	multi-exon	FALSE	canonical	1	169332	junction_1	139029.37195197056	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	158	2581	25.0	-10	True	AATAAA	-32
PB.8463.13	chr3	+	2404	11	novel_in_catalog	RNF13	novel	2843	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	24313	junction_1	152954.13522180432	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	840	1382	35.0	31	True	AATAAA	-16
PB.3885.9	chr15	-	1462	8	full-splice_match	CCPG1	ENST00000310958.10	6822	8	216	5144	12	-1376	multi-exon	FALSE	canonical	1	323777	junction_7	93981.48656050536	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1377	84	1460	60.0	-1	True	NA	NA
PB.3885.8	chr15	-	1960	8	full-splice_match	CCPG1	ENST00000310958.10	6822	8	150	4712	11	-944	multi-exon	FALSE	canonical	1	323777	junction_7	93981.48656050536	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1809	150	1958	70.0	-2	True	AAGAAA	-26
PB.3014.1	chr12	+	2672	2	intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7467	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	131	396	1	396	20.0	0	True	GATAAA	-26
PB.10530.14	chr7	-	2829	11	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	-7	0	intron_retention	FALSE	canonical	1	351959	junction_10	86210.4408276051	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	145	2109	90.0	-2	True	NA	NA
PB.10530.17	chr7	-	2546	11	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	16	-162	intron_retention	FALSE	canonical	1	351959	junction_10	86210.4408276051	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	24	1988	60.0	-3	True	NA	NA
PB.10530.16	chr7	-	2518	12	incomplete-splice_match	MYO1G	ENST00000648014.1	3086	21	18	5667	-15	0	3prime_fragment	FALSE	canonical	1	351959	junction_11	83567.62772857572	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	55	1632	90.0	-1	True	NA	NA
PB.2710.1	chr12	-	1901	8	full-splice_match	CDK4	ENST00000257904.10	2076	8	141	34	-16	-34	multi-exon	FALSE	canonical	1	1501075	junction_7	490535.42596677784	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	226	1137	85.0	-8	True	NA	NA
PB.10530.10	chr7	-	3212	22	novel_not_in_catalog	MYO1G	novel	3033	21	NA	NA	-7	2	any annotated donor/acceptor	FALSE	canonical	1	1267	junction_21	160528.57523963487	NA	25	3	TRUE	NA	NA	NA	C	coding	930	2793	345	3137	0.0	-2	True	AATAAA	-14
PB.10530.13	chr7	-	2899	10	novel_in_catalog	MYO1G	novel	3033	21	NA	NA	-11	0	intron_retention	FALSE	canonical	1	351959	junction_9	89966.01378270918	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	51	1919	90.0	3	True	NA	NA
PB.2710.2	chr12	-	1340	8	full-splice_match	CDK4	ENST00000257904.10	2076	8	201	535	2	149	multi-exon	FALSE	canonical	1	1501075	junction_7	490535.42596677784	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	166	1077	80.0	-23	True	NA	NA
PB.7964.15	chr3	-	1285	1	novel_in_catalog	ANKRD28	novel	6383	28	NA	NA	37	-15221	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	36	True	TTTAAA	-31
PB.10530.19	chr7	-	3633	5	incomplete-splice_match	MYO1G	ENST00000480503.5	5672	10	-113	3788	-15	-3788	3prime_fragment	FALSE	canonical	1	351959	junction_4	122667.48250147632	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	153	845	10.0	7724	False	NA	NA
PB.10530.18	chr7	-	2421	12	incomplete-splice_match	MYO1G	ENST00000648014.1	3086	21	-47	5829	-1	-162	3prime_fragment	FALSE	canonical	1	351959	junction_11	83567.62772857572	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	120	1697	60.0	7757	False	NA	NA
PB.286.3	chr1	+	3410	19	full-splice_match	AGO3	ENST00000373191.8	19687	19	16	16261	-1	0	multi-exon	FALSE	canonical	1	61469	junction_6	22367.887580037812	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	409	2916	35.0	-11	True	TTTAAA	-26
PB.2744.10	chr12	-	2655	3	full-splice_match	MDM1	ENST00000393543.7	2718	3	-40	103	17	13	multi-exon	FALSE	canonical	1	15711	junction_1	26772.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	ATTAAA	-25
PB.3561.11	chr14	-	4424	16	novel_not_in_catalog	AREL1	novel	742	6	NA	NA	-5	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	71946.30142587055	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	103	1968	50.0	-41	False	AATAAA	-5
PB.2700.8	chr12	+	3150	20	novel_not_in_catalog	MARS	novel	3592	23	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	490705.25465764117	NA	1	1	TRUE	NA	NA	NA	C	coding	639	1920	813	2732	20.0	-3	True	AATAAA	-23
PB.2700.9	chr12	+	3051	20	novel_in_catalog	MARS	novel	3592	23	NA	NA	0	-2	intron_retention	FALSE	canonical	1	865817	junction_2	289193.7677777197	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2610	24	2633	20.0	-3	True	AATAAA	-23
PB.2700.6	chr12	+	2931	20	novel_in_catalog	MARS	novel	3592	23	NA	NA	1	-2	intron_retention	FALSE	canonical	1	865817	junction_2	287835.2752106104	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	25	1698	20.0	-4	True	AATAAA	-23
PB.2700.7	chr12	+	3327	19	novel_in_catalog	MARS	novel	3592	23	NA	NA	0	-2	intron_retention	FALSE	canonical	1	865817	junction_2	295567.54792526795	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	24	1697	20.0	-3	True	AATAAA	-23
PB.2700.4	chr12	+	3591	18	novel_in_catalog	MARS	novel	3592	23	NA	NA	1	-2	intron_retention	FALSE	canonical	1	865817	junction_2	303746.304250278	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	35	1708	20.0	-2748	False	AATAAA	-23
PB.2700.5	chr12	+	2986	20	novel_in_catalog	MARS	novel	3592	23	NA	NA	0	-2	intron_retention	FALSE	canonical	1	46125	junction_13	402818.6957712253	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	26	1666	20.0	-5	True	AATAAA	-23
PB.2700.2	chr12	+	2572	20	incomplete-splice_match	MARS	ENST00000262027.9	2905	21	111	319	0	-317	3prime_fragment	FALSE	canonical	1	865817	junction_2	244549.2347131147	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2547	24	2570	55.0	-3	True	NA	NA
PB.2700.3	chr12	+	3196	19	novel_in_catalog	MARS	novel	3592	23	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	865817	junction_2	295317.40432870603	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	38	1711	20.0	-2751	False	AATAAA	-22
PB.2700.1	chr12	+	2871	22	novel_not_in_catalog	MARS	novel	3592	23	NA	NA	13	-3	any annotated donor/acceptor	FALSE	canonical	1	4281	junction_19	467962.65253607434	NA	0	NA	TRUE	NA	NA	NA	C	coding	861	2586	55	2640	20.0	-2768	False	AATAAA	-22
PB.5783.15	chr19	-	2009	11	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	77837	junction_5	634612.3035329602	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	84	710	20.0	-8	True	AATAAA	-14
PB.7537.1	chr21	-	2020	2	antisense	novelGene_SLC37A1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1926	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	99	300	341	640	25.0	3	True	NA	NA
PB.10546.1	chr7	-	3780	3	full-splice_match	SEC61G	ENST00000480303.1	661	3	30	-3149	4	1	multi-exon	FALSE	canonical	1	2702864	junction_2	256059.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-1	True	ATTAAA	-14
PB.599.2	chr1	+	1170	8	full-splice_match	GSTM2	ENST00000241337.8	1157	8	-14	1	1	-1	multi-exon	FALSE	canonical	1	166321	junction_2	129671.5209837723	NA	0	NA	TRUE	NA	NA	NA	A	coding	218	657	65	721	5.0	-5	True	AGTAAA	-12
PB.9385.10	chr5	+	6121	1	novel_in_catalog	CAMK4	novel	557	6	NA	NA	12	-134689	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	113	342	3	344	45.0	-7	True	TTTAAA	-16
PB.9385.13	chr5	+	3696	1	incomplete-splice_match	CAMK4	ENST00000282356.8	12240	11	267100	5	8698	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	3852	False	AATAAA	-17
PB.7294.2	chr20	-	1970	1	full-splice_match	MAFB	ENST00000373313.2	3393	1	3	1420	3	-1420	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	323	972	388	1359	65.0	-2	True	NA	NA
PB.7294.1	chr20	-	2265	1	full-splice_match	MAFB	ENST00000373313.2	3393	1	4	1124	4	-1124	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	89	NA	NA	NA	NA	NA	C	coding	323	972	387	1358	80.0	-1	True	NA	NA
PB.7867.8	chr22	+	3375	11	novel_in_catalog	GTSE1	novel	3112	12	NA	NA	184	-1	intron_retention	FALSE	canonical	1	127997	junction_1	55530.531353121405	NA	2	NA	TRUE	NA	NA	NA	C	coding	739	2220	477	2696	25.0	-343	False	AATAAA	-18
PB.11233.10	chr8	-	3403	4	full-splice_match	TRIQK	ENST00000537541.1	3510	4	1	106	0	-3	multi-exon	FALSE	canonical	1	9819	junction_3	99151.72713013571	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.11671.4	chr9	+	2869	15	novel_in_catalog	TDRD7	novel	3834	17	NA	NA	183	-8	no_combination_of_known_junctions	FALSE	canonical	1	645	junction_6	56193.234340741314	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	113	2635	40.0	37	True	AATAAA	-12
PB.8109.2	chr3	-	1754	2	full-splice_match	CCDC71	ENST00000321895.6	1781	2	-2	29	-2	-29	multi-exon	FALSE	canonical	1	153397	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	110	1513	20.0	-6	True	NA	NA
PB.10724.1	chr7	-	2893	6	novel_not_in_catalog	PMS2P1	novel	1228	7	NA	NA	6018	2066	intron_retention	FALSE	canonical	0	0	junction_3	154664.3916363427	NA	3	1	TRUE	NA	NA	NA	B	coding	155	468	2	469	75.0	69	False	NA	NA
PB.10724.2	chr7	-	2871	7	novel_not_in_catalog	PMS2P1	novel	1228	7	NA	NA	5962	2066	intron_retention	FALSE	canonical	1	21595	junction_1	119923.91533720684	NA	0	NA	TRUE	NA	NA	NA	B	coding	86	261	549	809	75.0	13	True	NA	NA
PB.11054.7	chr8	+	4337	12	novel_not_in_catalog	ESCO2	novel	698	3	NA	NA	0	-760	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	38099.33134247636	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	71	1876	10.0	0	True	NA	NA
PB.11780.15	chr9	+	1977	9	novel_in_catalog	NEK6	novel	2578	10	NA	NA	-2	-499	no_combination_of_known_junctions	FALSE	canonical	1	1810	junction_4	276860.0256650179	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	155	985	35.0	10	True	NA	NA
PB.12056.2	chrX	-	3600	7	full-splice_match	ZNF182	ENST00000396965.5	3586	7	-14	0	-14	0	multi-exon	FALSE	canonical	1	10836	junction_6	27480.468710623467	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	366	2285	20.0	-4	True	AAAAAG	-3
PB.12056.3	chrX	-	3504	6	novel_in_catalog	ZNF182	novel	3465	6	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	1	10836	junction_5	26478.318612782045	NA	2	1	TRUE	NA	NA	NA	C	coding	620	1863	327	2189	20.0	-2	True	AAAAAG	-3
PB.12056.1	chrX	-	3635	7	novel_not_in_catalog	ZNF182	novel	3465	6	NA	NA	-16	-4	any annotated donor/acceptor	FALSE	canonical	1	4775	junction_4	27054.448670946687	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	405	2324	15.0	-6	True	TTTAAA	-2
PB.3026.6	chr12	-	7541	49	full-splice_match	POLE	ENST00000320574.9	7840	49	18	281	6	220	multi-exon	FALSE	canonical	1	96231	junction_48	88003.70730246953	NA	0	NA	TRUE	NA	NA	NA	C	coding	2286	6861	27	6887	15.0	0	True	AAAACA	-18
PB.9383.13	chr5	+	4150	4	novel_not_in_catalog	SLC25A46	novel	558	8	NA	NA	-84	-2	any annotated donor/acceptor	FALSE	canonical	1	373	junction_1	228588.7067935675	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	156	773	15.0	-3500	False	AATAAA	-16
PB.12056.4	chrX	-	3705	5	incomplete-splice_match	ZNF182	ENST00000376943.7	3465	6	-39	5	-16	-4	intron_retention	FALSE	canonical	1	27521	junction_3	22297.296186981956	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	532	2394	15.0	-6	True	TTTAAA	-2
PB.3026.5	chr12	-	5749	32	novel_not_in_catalog	POLE	novel	2105	2	NA	NA	4847	0	any annotated donor/acceptor	FALSE	canonical	1	167	junction_11	111425.97466812168	NA	4	NA	TRUE	NA	NA	NA	C	coding	1009	3030	247	3276	15.0	-4227	False	NA	NA
PB.181.10	chr1	-	2195	6	novel_in_catalog	RSRP1	novel	1502	5	NA	NA	-28	-1	intron_retention	FALSE	canonical	1	62064	junction_1	425000.5982633907	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	244	924	30.0	2	False	AATAAA	-19
PB.181.11	chr1	-	2858	5	novel_in_catalog	RSRP1	novel	1502	5	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	45203	junction_1	441494.8868712977	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	244	972	30.0	2	False	AATAAA	-18
PB.181.12	chr1	-	2059	6	novel_in_catalog	RSRP1	novel	1502	5	NA	NA	0	-2	intron_retention	FALSE	canonical	1	38672	junction_2	430578.5331998798	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	213	893	30.0	-1	True	AATAAA	-18
PB.181.13	chr1	-	4057	2	incomplete-splice_match	RSRP1	ENST00000431849.3	1954	3	-8	-1816	0	0	intron_retention	FALSE	canonical	1	714216	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	242	729	492	1220	20.0	-1	True	AATAAA	-13
PB.181.15	chr1	-	2552	4	full-splice_match	RSRP1	ENST00000498238.1	2941	4	0	389	0	-275	multi-exon	FALSE	canonical	1	533792	junction_3	317726.1191658977	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	213	941	75.0	-1	True	NA	NA
PB.181.17	chr1	-	5028	1	novel_in_catalog	RSRP1	novel	3034	6	NA	NA	358	-9386	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	138	417	4113	4529	10.0	NA	False	NA	NA
PB.181.18	chr1	-	4175	1	novel_in_catalog	RSRP1	novel	3034	6	NA	NA	358	-10239	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.181.19	chr1	-	2137	1	novel_in_catalog	RSRP1	novel	3034	6	NA	NA	-1	-12636	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	NA	False	NA	NA
PB.11650.2	chr9	-	4793	5	full-splice_match	ZNF484	ENST00000375495.7	2867	5	-41	-1885	-11	847	multi-exon	FALSE	canonical	1	21942	junction_4	18600.481786434997	NA	1	NA	TRUE	NA	NA	NA	C	coding	852	2559	191	2749	40.0	-12	True	NA	NA
PB.9084.4	chr4	+	4297	29	novel_in_catalog	TRAPPC11	novel	4552	30	NA	NA	-27	0	intron_retention	FALSE	canonical	1	97	junction_1	58273.29430955058	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	204	3350	10.0	-1	True	AATAAA	-18
PB.11671.6	chr9	+	3415	16	novel_in_catalog	TDRD7	novel	3834	17	NA	NA	203	-3	no_combination_of_known_junctions	FALSE	canonical	1	4556	junction_1	51975.0411766605	NA	1	NA	TRUE	NA	NA	NA	C	coding	1024	3075	102	3176	35.0	57	True	AATAAA	-17
PB.3450.5	chr14	-	5015	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	-23	1004	5	-1004	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	90	3479	30.0	-2	True	AGTAAA	-24
PB.3450.4	chr14	-	5124	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	-22	894	6	-894	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	89	3478	25.0	-1	True	NA	NA
PB.3450.7	chr14	-	3810	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	-24	2210	4	-1	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	91	3480	20.0	-3	True	ATTAAA	-28
PB.3450.6	chr14	-	4095	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	-41	1942	-13	267	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	108	3497	20.0	292	False	AATGAA	-15
PB.3450.1	chr14	-	6016	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	-21	1	7	-1	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	88	3477	45.0	0	True	NA	NA
PB.3450.2	chr14	-	5337	26	full-splice_match	WDHD1	ENST00000360586.7	5996	26	5	654	5	-654	multi-exon	FALSE	canonical	1	127999	junction_19	39894.74251645698	NA	2	NA	TRUE	NA	NA	NA	C	coding	1129	3390	62	3451	5.0	26	True	AGTAAA	-16
PB.3450.9	chr14	-	3710	25	full-splice_match	WDHD1	ENST00000420358.2	3722	25	10	2	10	-2	multi-exon	FALSE	canonical	1	11378	junction_24	53563.2582925547	NA	1	NA	TRUE	NA	NA	NA	C	coding	1006	3021	361	3381	20.0	3	True	ATTAAA	-27
PB.3450.8	chr14	-	3588	24	novel_in_catalog	WDHD1	novel	5996	26	NA	NA	-7	-1	no_combination_of_known_junctions	FALSE	canonical	1	282	junction_23	55476.584663958136	NA	1	NA	TRUE	NA	NA	NA	C	coding	1006	3021	238	3258	20.0	14	True	ATTAAA	-28
PB.6834.4	chr2	-	2847	18	novel_not_in_catalog	SLC25A12	novel	2979	18	NA	NA	4	-8	any annotated donor/acceptor	FALSE	canonical	1	3606	junction_11	82651.2546404059	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	974	1951	40.0	3	True	AATAAA	-10
PB.3182.1	chr13	+	1972	6	full-splice_match	CKAP2	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	1	338978	junction_2	80523.26199453174	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	119	1603	10.0	-41	True	ATTAAA	-19
PB.6834.6	chr2	-	2415	17	novel_in_catalog	SLC25A12	novel	2979	18	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	8637	junction_1	73189.86444363279	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	31	2013	30.0	-1	True	AATAAA	-10
PB.6834.7	chr2	-	2627	19	novel_in_catalog	SLC25A12	novel	2979	18	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	4093	junction_15	97296.6646950335	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	668	2179	20.0	261	False	AATAAA	-19
PB.6834.1	chr2	-	5940	18	full-splice_match	SLC25A12	ENST00000422440.6	2979	18	8	-2969	0	2969	multi-exon	FALSE	canonical	1	158172	junction_17	57265.316571262585	NA	1	NA	TRUE	NA	NA	NA	C	coding	678	2037	31	2067	30.0	-1	True	NA	NA
PB.3440.8	chr14	-	2866	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	78	632	20.0	-16	True	AATAAA	-16
PB.3440.9	chr14	-	2808	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	90	644	20.0	104	False	AATAAA	-16
PB.3440.6	chr14	-	1974	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	252	806	25.0	-58	True	AATAAA	-17
PB.3440.7	chr14	-	3297	8	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-6	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	98712.33113260294	NA	12	1	TRUE	NA	NA	NA	C	coding	184	555	77	631	20.0	-15	True	AATAAA	-16
PB.3440.4	chr14	-	2987	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	2	1	TRUE	NA	NA	NA	C	coding	184	555	273	827	25.0	-79	True	AATAAA	-17
PB.3440.5	chr14	-	2857	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	596	junction_1	92999.99769429506	NA	2	NA	TRUE	NA	NA	NA	C	coding	184	555	79	633	25.0	-17	True	AATAAA	-17
PB.3440.2	chr14	-	3198	8	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-6	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	98712.33113260294	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	77	631	25.0	-15	True	AATAAA	-17
PB.3440.3	chr14	-	2998	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	23	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	233	787	25.0	-39	True	AATAAA	-17
PB.31.3	chr1	-	3023	11	full-splice_match	GNB1	ENST00000610897.4	3145	11	120	2	-31	-1	multi-exon	FALSE	canonical	1	183617	junction_10	1213017.0028799102	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	225	1247	15.0	756	False	AATAAA	-18
PB.3440.1	chr14	-	3077	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-24	12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	3	1	TRUE	NA	NA	NA	C	coding	184	555	280	834	35.0	-86	True	AATAAA	-29
PB.8722.3	chr4	+	3310	27	novel_in_catalog	ANAPC4	novel	2685	29	NA	NA	35	0	intron_retention	FALSE	canonical	1	99324	junction_14	90450.94335049295	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	108	1763	15.0	-24	True	AATAAA	-20
PB.11266.4	chr8	+	4671	29	incomplete-splice_match	VPS13B	ENST00000358544.6	14094	62	7	366209	-1	-66414	3prime_fragment	FALSE	canonical	1	11302	junction_27	41662.592016513314	NA	0	NA	TRUE	NA	NA	NA	B	coding	1522	4566	105	4670	70.0	-1	True	NA	NA
PB.8752.10	chr4	-	3187	16	novel_in_catalog	APBB2	novel	8972	18	NA	NA	5	54	combination_of_known_junctions	FALSE	canonical	1	43553	junction_13	64784.86655371162	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	442	2658	25.0	2184	False	CATAAA	-19
PB.3182.5	chr13	+	3280	8	novel_in_catalog	CKAP2	novel	579	3	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	1	17886	junction_2	158068.7111551331	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	267	2069	30.0	-19	True	ATTAAA	-18
PB.980.8	chr1	+	6684	28	full-splice_match	LAMC1	ENST00000258341.4	7889	28	-21	1226	-21	-1226	multi-exon	FALSE	canonical	1	693044	junction_8	203864.51252199317	NA	0	NA	TRUE	NA	NA	NA	C	coding	1609	4830	279	5108	15.0	5	True	AATATA	-22
PB.6967.18	chr2	-	2376	19	full-splice_match	NDUFS1	ENST00000233190.10	11819	19	159	9284	-19	0	multi-exon	FALSE	canonical	1	480962	junction_18	196264.18197030303	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	109	2292	75.0	-20	True	NA	NA
PB.3182.4	chr13	+	1654	7	incomplete-splice_match	CKAP2	ENST00000258607.9	3375	9	11	8001	11	2505	3prime_fragment	FALSE	canonical	1	338978	junction_2	74295.84685958787	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1545	108	1652	25.0	-30	True	AAAAAG	-11
PB.9950.19	chr6	-	4231	16	full-splice_match	SRPK1	ENST00000373825.6	4592	16	234	127	-7	-59	multi-exon	FALSE	canonical	1	388970	junction_2	91632.64998086411	NA	3	NA	TRUE	NA	NA	NA	C	coding	655	1968	53	2020	10.0	-14	True	AATAAA	-31
PB.3369.13	chr14	-	9313	43	novel_in_catalog	HECTD1	novel	3748	18	NA	NA	0	-1	intron_retention	FALSE	canonical	1	129720	junction_42	153498.22623072192	NA	2	NA	TRUE	NA	NA	NA	C	coding	2563	7692	811	8502	30.0	-12	True	ATTAAA	-13
PB.3182.7	chr13	+	2175	9	full-splice_match	CKAP2	ENST00000258607.9	3375	9	23	1177	-5	30	multi-exon	FALSE	canonical	1	338978	junction_2	65041.38923204497	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	96	2144	10.0	-18	True	AATAAA	-22
PB.3369.16	chr14	-	6217	31	novel_in_catalog	HECTD1	novel	3748	18	NA	NA	6	-879	intron_retention	FALSE	canonical	1	129720	junction_30	104152.84459274264	NA	0	NA	TRUE	NA	NA	NA	C	coding	1836	5508	710	6217	70.0	-25	True	AATGAA	-11
PB.3369.17	chr14	-	2473	12	incomplete-splice_match	HECTD1	ENST00000556224.5	3267	17	-57	12734	-57	-12734	3prime_fragment	FALSE	canonical	1	129720	junction_11	89248.16962449322	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1926	547	2472	40.0	-15	True	AATGAA	-17
PB.3369.18	chr14	-	2014	10	incomplete-splice_match	HECTD1	ENST00000556224.5	3267	17	-43	24327	-43	4516	3prime_fragment	FALSE	canonical	1	129720	junction_9	92655.08246418241	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	2	505	75.0	-1	True	AATAAA	-10
PB.3369.19	chr14	-	1813	10	incomplete-splice_match	HECTD1	ENST00000553700.5	9080	43	104	68320	9	4516	3prime_fragment	FALSE	canonical	1	102057	junction_9	98916.45349597922	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1482	332	1813	75.0	-22	True	AATAAA	-10
PB.3182.6	chr13	+	3551	8	novel_in_catalog	CKAP2	novel	579	3	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	1	17886	junction_2	158068.7111551331	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	266	2068	30.0	-18	True	AATAAA	-15
PB.2778.7	chr12	-	2141	15	full-splice_match	PPP1R12A	ENST00000547330.5	2275	15	42	92	42	4	multi-exon	FALSE	canonical	1	109492	junction_2	130687.01597187323	NA	2	NA	TRUE	NA	NA	NA	C	coding	659	1977	164	2140	75.0	8	True	AAAACA	-32
PB.2778.6	chr12	-	2507	16	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	21	112	combination_of_known_junctions	FALSE	canonical	1	109492	junction_3	137709.39061732704	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2253	253	2505	75.0	9	True	NA	NA
PB.2778.5	chr12	-	2644	17	incomplete-splice_match	PPP1R12A	ENST00000437004.6	4639	25	323	22399	-7	112	internal_fragment	TRUE	canonical	1	300019	junction_4	104372.29729255268	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2430	213	2642	75.0	0	True	NA	NA
PB.2778.4	chr12	-	3141	10	novel_not_in_catalog	PPP1R12A	novel	5582	26	NA	NA	-51	-278	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	193707.15137706528	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	324	1058	70.0	-1157	False	AATAAA	-20
PB.257.8	chr1	+	2556	13	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	19	-7	intron_retention	FALSE	canonical	1	717714	junction_4	346505.2826999499	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	1103	1972	10.0	1	True	AATAAA	-19
PB.2778.2	chr12	-	3445	10	novel_not_in_catalog	PPP1R12A	novel	5582	26	NA	NA	-81	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	193707.15137706528	NA	3	NA	TRUE	NA	NA	NA	C	coding	244	735	354	1088	35.0	-1187	False	CATAAA	-14
PB.8691.2	chr4	-	2659	4	full-splice_match	GRPEL1	ENST00000264954.4	2775	4	124	-8	-9	8	multi-exon	FALSE	canonical	1	669619	junction_3	149817.79858288608	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	42	695	20.0	-10	True	NA	NA
PB.257.4	chr1	+	3950	12	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	12	-10	intron_retention	FALSE	canonical	1	717714	junction_4	334355.0684157079	NA	1	NA	TRUE	NA	NA	NA	C	coding	238	717	2653	3369	10.0	-6	True	AATAAA	-16
PB.257.5	chr1	+	2483	14	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	12	-10	intron_retention	FALSE	canonical	1	28502	junction_5	460674.842437193	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	1033	1902	10.0	-6	True	AATAAA	-16
PB.257.6	chr1	+	4908	12	novel_in_catalog	HDAC1	novel	2124	14	NA	NA	16	-7	intron_retention	FALSE	canonical	1	717714	junction_4	329673.31379392504	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	3608	4324	10.0	-2	True	AATAAA	-19
PB.257.7	chr1	+	2060	14	novel_not_in_catalog	HDAC1	novel	2124	14	NA	NA	18	-7	any annotated donor/acceptor	FALSE	canonical	1	6423	junction_9	431853.8115545323	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	67	1476	10.0	0	True	AATAAA	-19
PB.8691.1	chr4	-	2939	4	full-splice_match	GRPEL1	ENST00000264954.4	2775	4	97	-261	-36	261	multi-exon	FALSE	canonical	1	669619	junction_3	149817.79858288608	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	69	722	25.0	-37	False	ATTAAA	-18
PB.2778.9	chr12	-	2181	15	novel_in_catalog	PPP1R12A	novel	5582	26	NA	NA	-25	13	combination_of_known_junctions	FALSE	canonical	1	33203	junction_3	171292.88357564117	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1950	231	2180	70.0	-18	True	AAGAAA	-1
PB.2778.8	chr12	-	2017	15	incomplete-splice_match	PPP1R12A	ENST00000550107.5	2925	24	-15	21388	-15	13	3prime_fragment	FALSE	canonical	1	164159	junction_3	115166.14997498711	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2001	16	2016	70.0	-18	True	AAGAAA	-1
PB.7917.3	chr3	+	2245	17	novel_in_catalog	MTMR14	novel	2368	18	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	33670	junction_8	145795.093426193	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	105	1826	15.0	-25	True	AATAAA	-23
PB.7917.2	chr3	+	2400	18	novel_in_catalog	MTMR14	novel	2368	18	NA	NA	7	-1	no_combination_of_known_junctions	FALSE	canonical	1	33670	junction_8	144621.83163439468	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	105	1982	15.0	-25	True	AATAAA	-22
PB.7917.1	chr3	+	2350	18	full-splice_match	MTMR14	ENST00000353332.9	2368	18	17	1	0	0	multi-exon	TRUE	canonical	1	101798	junction_17	109791.98240422264	NA	1	NA	TRUE	NA	NA	NA	C	coding	598	1797	135	1931	15.0	-55	False	AATAAA	-23
PB.7917.5	chr3	+	2471	19	full-splice_match	MTMR14	ENST00000296003.8	2494	19	24	-1	13	0	multi-exon	FALSE	canonical	1	165603	junction_17	112702.49633612852	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	99	2051	10.0	-19	True	AATAAA	-24
PB.7917.4	chr3	+	2120	17	full-splice_match	MTMR14	ENST00000351233.9	2105	17	-11	-4	-4	0	multi-exon	FALSE	canonical	1	87087	junction_16	113477.00503178772	NA	25	3	TRUE	NA	NA	NA	C	coding	538	1617	84	1700	10.0	-4	True	AATAAA	-24
PB.278.9	chr1	+	7096	31	novel_in_catalog	ZMYM4	novel	6994	30	NA	NA	-171	-131	combination_of_known_junctions	FALSE	canonical	1	56092	junction_1	96567.21969371042	NA	0	NA	TRUE	NA	NA	NA	C	coding	1516	4551	410	4960	80.0	3	True	NA	NA
PB.612.7	chr1	-	3363	8	incomplete-splice_match	WDR77	ENST00000235090.9	2576	10	120	385	120	-385	intron_retention	FALSE	canonical	1	665551	junction_7	132202.02602371687	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-16
PB.6487.1	chr2	+	2694	9	incomplete-splice_match	KIAA1841	ENST00000612149.1	4202	19	36310	-7	-9343	3	5prime_fragment	FALSE	canonical	1	49973	junction_3	36910.680280238674	NA	1	NA	TRUE	NA	NA	NA	A	coding	96	291	283	573	20.0	NA	False	AATAAA	-18
PB.11780.14	chr9	+	2223	11	full-splice_match	NEK6	ENST00000373600.7	3619	11	-8	1404	-8	-535	multi-exon	FALSE	canonical	1	2138	junction_1	270847.9915963196	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	224	1267	60.0	4	True	NA	NA
PB.4474.10	chr16	-	3733	12	novel_in_catalog	DYNC1LI2	novel	4515	13	NA	NA	-8	0	intron_retention	FALSE	canonical	1	465148	junction_2	114673.70178369955	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	19	951	80.0	-7	True	NA	NA
PB.4474.11	chr16	-	5470	11	novel_in_catalog	DYNC1LI2	novel	4515	13	NA	NA	-2	0	intron_retention	FALSE	canonical	1	465148	junction_2	111569.61790133548	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	13	876	80.0	-1	True	NA	NA
PB.4474.12	chr16	-	1612	13	full-splice_match	DYNC1LI2	ENST00000258198.6	4515	13	195	2708	-2	0	multi-exon	FALSE	canonical	1	465148	junction_2	115671.98883297713	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	13	1491	80.0	-1	True	NA	NA
PB.11780.17	chr9	+	1515	10	full-splice_match	NEK6	ENST00000545174.5	2573	10	77	981	67	-981	multi-exon	FALSE	canonical	1	37822	junction_1	217680.49572818677	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	64	1005	25.0	5	True	GATAAA	-24
PB.7835.1	chr22	+	2640	3	novel_in_catalog	OGFRP1	novel	1242	2	NA	NA	8	2015	intron_retention	FALSE	canonical	1	762	junction_1	1877.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	147	444	2	445	30.0	4	True	NA	NA
PB.6704.3	chr2	+	1935	3	full-splice_match	RABL2A	ENST00000493876.2	642	3	-1304	11	2	-11	multi-exon	FALSE	canonical	1	16048	junction_1	9276.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-6	True	AATAAA	-15
PB.5498.6	chr18	+	2915	16	full-splice_match	MALT1	ENST00000345724.7	2866	16	-69	20	-2	-20	multi-exon	FALSE	canonical	1	85063	junction_6	80019.08170080434	NA	1	1	TRUE	NA	NA	NA	C	coding	813	2442	182	2623	40.0	-2	True	NA	NA
PB.11671.2	chr9	+	3189	17	novel_not_in_catalog	TDRD7	novel	3834	17	NA	NA	139	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	54029.51378876179	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	157	2952	35.0	-7	True	AATAAA	-15
PB.612.3	chr1	-	2209	11	novel_in_catalog	AL390195.1	novel	415	2	NA	NA	-7910	-1621	no_combination_of_known_junctions	FALSE	canonical	1	52141	junction_1	334221.6921209633	NA	0	NA	TRUE	NA	NA	NA	B	coding	302	909	106	1014	20.0	17	False	AATAAA	-30
PB.278.8	chr1	+	2237	13	incomplete-splice_match	ZMYM4	ENST00000314607.10	6994	30	0	34446	0	-9964	3prime_fragment	FALSE	canonical	1	61165	junction_1	54389.18688100043	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2157	81	2237	65.0	0	True	NA	NA
PB.780.59	chr1	-	2646	8	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-3	59	intron_retention	FALSE	canonical	1	223198	junction_1	456783.46715667535	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1659	988	2646	50.0	-4	True	NA	NA
PB.612.2	chr1	-	2265	10	novel_in_catalog	AL390195.1	novel	415	2	NA	NA	-7856	-1620	intron_retention	FALSE	canonical	1	64252	junction_1	293062.10456753965	NA	1	NA	TRUE	NA	NA	NA	B	coding	302	909	52	960	20.0	-1	True	AATAAA	-31
PB.623.6	chr1	+	4291	18	full-splice_match	LRIG2	ENST00000361127.5	11555	18	1	7263	1	0	multi-exon	FALSE	canonical	1	36721	junction_11	22808.59533484666	NA	48	1	TRUE	NA	NA	NA	C	coding	1065	3198	198	3395	85.0	12	True	NA	NA
PB.11304.3	chr8	-	4556	7	novel_not_in_catalog	TRPS1	novel	9514	6	NA	NA	8	14	intron_retention	FALSE	canonical	1	8486	junction_5	41331.4910869693	NA	4	NA	TRUE	NA	NA	NA	C	coding	1287	3864	578	4441	30.0	3461	False	ATTAAA	-29
PB.780.58	chr1	-	2665	9	novel_in_catalog	ADAR	novel	6610	15	NA	NA	1	59	combination_of_known_junctions	FALSE	canonical	1	95616	junction_7	464889.0105635262	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1737	929	2665	50.0	0	True	NA	NA
PB.6803.4	chr2	-	1545	14	full-splice_match	RBMS1	ENST00000409972.5	1815	14	304	-34	304	-6	multi-exon	FALSE	canonical	1	168	junction_1	42385.34185821638	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	54	1259	85.0	0	True	NA	NA
PB.6803.2	chr2	-	1961	14	full-splice_match	RBMS1	ENST00000348849.7	4273	14	-78	2390	-78	-1	multi-exon	FALSE	canonical	1	168	junction_1	45955.72795031961	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	510	1730	90.0	-66	True	NA	NA
PB.6803.3	chr2	-	1708	15	novel_in_catalog	RBMS1	novel	4016	16	NA	NA	-33	-5	combination_of_known_junctions	FALSE	canonical	1	168	junction_1	48504.73177301828	NA	3	NA	TRUE	NA	NA	NA	C	coding	422	1269	153	1421	90.0	-10	True	NA	NA
PB.1855.1	chr11	+	1923	5	incomplete-splice_match	NAV2	ENST00000396087.7	7882	41	-759	238152	-497	295	3prime_fragment	FALSE	canonical	1	16809	junction_1	17407.200507261357	NA	1	NA	TRUE	NA	NA	NA	A	coding	263	792	859	1650	50.0	1	True	AATAAA	-9
PB.11671.3	chr9	+	3740	17	novel_not_in_catalog	TDRD7	novel	3834	17	NA	NA	152	-4	any annotated donor/acceptor	FALSE	canonical	1	6343	junction_13	53171.580368673865	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	144	2525	40.0	6	True	AATAAA	-16
PB.623.1	chr1	+	4066	18	full-splice_match	LRIG2	ENST00000361127.5	11555	18	-31	7520	-31	-257	multi-exon	FALSE	canonical	1	36721	junction_11	22808.59533484666	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	230	3427	20.0	-20	True	TATAAA	-22
PB.7907.4	chr3	+	2766	5	full-splice_match	BHLHE40	ENST00000256495.3	3473	5	343	364	22	-364	multi-exon	FALSE	canonical	1	1004030	junction_1	81628.33533461283	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	261	1499	25.0	22	True	AAAAAG	-16
PB.7907.5	chr3	+	2153	5	full-splice_match	BHLHE40	ENST00000256495.3	3473	5	343	977	22	-977	multi-exon	FALSE	canonical	1	1004030	junction_1	81628.33533461283	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	261	1499	20.0	22	True	AATAAA	-17
PB.7907.1	chr3	+	2847	5	full-splice_match	BHLHE40	ENST00000256495.3	3473	5	481	145	160	-145	multi-exon	FALSE	canonical	1	1004030	junction_1	81628.33533461283	NA	1	NA	TRUE	NA	NA	NA	C	coding	412	1239	123	1361	25.0	6	True	AATAAA	-24
PB.7907.2	chr3	+	3530	3	novel_in_catalog	BHLHE40	novel	3473	5	NA	NA	-91	-145	intron_retention	FALSE	canonical	1	1091635	junction_2	67529.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	1226	2044	25.0	0	True	AATAAA	-24
PB.9507.1	chr5	+	3412	1	full-splice_match	PCDHB3	ENST00000231130.3	3355	1	-63	6	-63	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	796	2391	241	2631	35.0	-95	False	ATTAAA	-13
PB.780.53	chr1	-	3027	4	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	-5	-64	intron_retention	FALSE	canonical	1	13	junction_1	370723.2122469089	NA	15	NA	TRUE	NA	NA	NA	C	coding	579	1740	186	1925	15.0	-6	True	NA	NA
PB.8421.11	chr3	+	2752	3	full-splice_match	NCK1	ENST00000469404.1	2403	3	15	-364	15	364	multi-exon	FALSE	canonical	1	32026	junction_1	197113.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	313	942	77	1018	35.0	-17	True	AGTAAA	-17
PB.6739.4	chr2	+	1852	9	full-splice_match	IMP4	ENST00000259239.7	1740	9	644	-756	-8	29	multi-exon	FALSE	canonical	1	498005	junction_1	279446.6375258152	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	65	940	20.0	-28	True	NA	NA
PB.8435.39	chr3	+	6546	4	full-splice_match	ZBTB38	ENST00000504673.5	590	4	0	-5956	0	439	multi-exon	FALSE	canonical	1	6166	junction_2	36256.24555239491	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	318	3896	35.0	14	True	ATTAAA	-18
PB.3438.5	chr14	+	2766	14	novel_in_catalog	PSMC6	novel	2188	14	NA	NA	1	-140	combination_of_known_junctions	FALSE	canonical	1	33893	junction_4	89754.75156191358	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	1858	2706	55.0	1	True	AATAAA	-4
PB.3438.4	chr14	+	1565	14	full-splice_match	PSMC6	ENST00000606149.5	1560	14	-1	-4	1	0	multi-exon	FALSE	canonical	1	2727	junction_4	93237.44238932004	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	18	1187	15.0	-6	True	AATAAA	-27
PB.3438.3	chr14	+	1789	14	novel_in_catalog	PSMC6	novel	2188	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2727	junction_4	92128.52159588684	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	567	1415	25.0	-9	True	AATAAA	-23
PB.3438.2	chr14	+	1238	14	full-splice_match	PSMC6	ENST00000606149.5	1560	14	-4	326	-1	-152	multi-exon	FALSE	canonical	1	2727	junction_4	93237.44238932004	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	21	1190	75.0	-9	True	NA	NA
PB.3438.1	chr14	+	3101	14	novel_in_catalog	PSMC6	novel	2188	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	33893	junction_4	89754.75156191358	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	1875	2723	15.0	-16	True	AATAAA	-27
PB.8435.38	chr3	+	3087	4	full-splice_match	ZBTB38	ENST00000504673.5	590	4	-7	-2490	-7	459	multi-exon	FALSE	canonical	1	6166	junction_2	36256.24555239491	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2763	325	3087	55.0	7	True	NA	NA
PB.5817.1	chr19	+	804	2	full-splice_match	MRPL34	ENST00000252602.1	968	2	164	0	-40	0	multi-exon	FALSE	canonical	1	776357	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	92	279	62	340	25.0	-40	True	NA	NA
PB.6443.21	chr2	-	4267	38	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	-262	-218	any annotated donor/acceptor	FALSE	canonical	1	1138	junction_37	306236.1103123779	NA	2	1	TRUE	NA	NA	NA	C	coding	1352	4059	106	4164	25.0	-263	False	AATAAA	-19
PB.9285.9	chr5	-	2723	11	novel_not_in_catalog	MRPS27	novel	2785	11	NA	NA	-9386	0	intron_retention	FALSE	canonical	1	419	junction_10	256799.08078971	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	837	1343	20.0	NA	False	AATAAA	-13
PB.9285.8	chr5	-	2784	11	novel_in_catalog	MRPS27	novel	2785	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	6083	junction_10	189004.42605264566	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	328	1404	20.0	7	True	AATAAA	-13
PB.9285.7	chr5	-	4234	9	novel_in_catalog	MRPS27	novel	2785	11	NA	NA	-9374	0	intron_retention	FALSE	canonical	1	16418	junction_3	194961.077554558	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	2348	2854	20.0	NA	False	AATAAA	-13
PB.9285.6	chr5	-	2801	10	novel_not_in_catalog	MRPS27	novel	2785	11	NA	NA	-9371	1	intron_retention	FALSE	canonical	1	6063	junction_9	199194.85653190303	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	343	1419	15.0	NA	False	AATAAA	-15
PB.9285.5	chr5	-	4710	10	novel_in_catalog	MRPS27	novel	2785	11	NA	NA	1	2	intron_retention	FALSE	canonical	1	420242	junction_5	87092.51109914994	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	2740	3327	15.0	1	True	AATAAA	-16
PB.9285.4	chr5	-	3135	10	novel_not_in_catalog	MRPS27	novel	2785	11	NA	NA	-412	3	intron_retention	FALSE	canonical	1	6784	junction_9	198997.375594085	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	675	1751	15.0	-1	True	AATAAA	-17
PB.9285.3	chr5	-	2734	11	novel_not_in_catalog	MRPS27	novel	2785	11	NA	NA	2	4	intron_retention	FALSE	canonical	1	24119	junction_2	183888.33778627723	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	39	1349	15.0	-21	False	AATAAA	-18
PB.9285.2	chr5	-	2640	11	full-splice_match	MRPS27	ENST00000261413.9	2785	11	30	115	0	4	multi-exon	FALSE	canonical	1	420242	junction_6	96248.9661258239	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	11	1255	15.0	7	True	AATAAA	-18
PB.9285.1	chr5	-	2772	11	full-splice_match	MRPS27	ENST00000261413.9	2785	11	18	-5	-4	5	multi-exon	FALSE	canonical	1	420242	junction_6	96248.9661258239	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	23	1267	40.0	-5	True	ATTAAA	-24
PB.7112.7	chr2	+	3539	27	novel_in_catalog	FARP2	novel	4051	27	NA	NA	-4	0	no_combination_of_known_junctions	FALSE	canonical	1	609	junction_26	47695.216942052044	NA	1	1	TRUE	NA	NA	NA	C	coding	1073	3222	129	3350	10.0	0	True	AATAAA	-17
PB.11511.5	chr9	-	3557	6	novel_in_catalog	FAM219A	novel	3624	6	NA	NA	-9	-4	intron_retention	FALSE	canonical	1	5508	junction_5	126899.86496352154	NA	1	NA	TRUE	NA	NA	NA	C	coding	156	471	317	787	35.0	-10	True	ATTAAA	-7
PB.11511.4	chr9	-	3648	7	novel_not_in_catalog	FAM219A	novel	3624	6	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_6	131366.88958631599	NA	12	1	TRUE	NA	NA	NA	C	coding	116	351	524	874	20.0	2	True	ATTAAA	-11
PB.7112.5	chr2	+	6830	14	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	-4	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	43856.47032451932	NA	2	1	TRUE	NA	NA	NA	C	coding	795	2388	129	2516	20.0	0	True	AATAAA	-28
PB.11511.1	chr9	-	6698	5	novel_in_catalog	FAM219A	novel	3624	6	NA	NA	3	0	intron_retention	FALSE	canonical	1	94211	junction_4	86486.21473788467	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	3569	3919	10.0	2	True	ATTAAA	-16
PB.11511.3	chr9	-	3593	6	full-splice_match	FAM219A	ENST00000297620.8	3588	6	0	-5	0	0	multi-exon	FALSE	canonical	1	76081	junction_4	99175.0766481176	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	308	814	10.0	-1	True	ATTAAA	-16
PB.11511.2	chr9	-	3654	6	full-splice_match	FAM219A	ENST00000445726.5	3644	6	-10	0	-10	0	multi-exon	FALSE	canonical	1	60588	junction_4	103166.53296374751	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	318	875	10.0	-11	True	ATTAAA	-16
PB.5807.2	chr19	+	2941	1	full-splice_match	AC008764.9	ENST00000624284.1	2505	1	752	-1188	752	1188	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.5807.1	chr19	+	3119	1	full-splice_match	AC008764.9	ENST00000624284.1	2505	1	752	-1366	752	1366	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.623.2	chr1	+	4619	19	novel_in_catalog	LRIG2	novel	11555	18	NA	NA	-30	170	combination_of_known_junctions	FALSE	canonical	1	5552	junction_12	30498.971110403214	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	1892	3553	75.0	-19	True	NA	NA
PB.7363.12	chr20	-	3111	4	novel_not_in_catalog	ZNF217	novel	5796	6	NA	NA	-475	6339	any annotated donor/acceptor	FALSE	canonical	1	29162	junction_3	147032.6048126741	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	575	3109	60.0	3387	False	NA	NA
PB.7363.13	chr20	-	2987	4	incomplete-splice_match	ZNF217	ENST00000371471.6	5796	6	0	9138	0	6339	3prime_fragment	FALSE	canonical	1	105356	junction_3	113563.46110435345	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	451	2985	60.0	-1	True	NA	NA
PB.10889.10	chr7	+	4170	15	incomplete-splice_match	AGK	ENST00000355413.8	3849	16	4263	-566	-1	566	5prime_fragment	FALSE	canonical	1	65274	junction_1	70350.86371258808	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	16	1284	100.0	-4865	False	NA	NA
PB.7363.11	chr20	-	3106	4	novel_not_in_catalog	ZNF217	novel	5796	6	NA	NA	1075	6339	any annotated donor/acceptor	FALSE	canonical	1	4627	junction_3	158038.93577287282	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	570	3104	60.0	4937	False	NA	NA
PB.7112.8	chr2	+	2891	13	incomplete-splice_match	FARP2	ENST00000627550.2	2122	18	-4	22870	-4	-4241	3prime_fragment	FALSE	canonical	1	74353	junction_1	25126.277559006274	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	129	2516	20.0	0	True	AATAGA	-19
PB.7090.9	chr2	+	1663	7	novel_in_catalog	LRRFIP1	novel	2775	24	NA	NA	28	-1542	no_combination_of_known_junctions	FALSE	canonical	1	13522	junction_1	121210.92119203707	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1449	213	1661	80.0	31	True	NA	NA
PB.7112.9	chr2	+	2377	18	full-splice_match	FARP2	ENST00000627550.2	2122	18	-4	-251	-4	-1	multi-exon	FALSE	canonical	1	9744	junction_17	48183.98097747187	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	129	2045	30.0	0	True	AATATA	-21
PB.6414.18	chr2	-	2800	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	82	7160	67	903	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	242	1897	40.0	1	True	NA	NA
PB.6414.19	chr2	-	2572	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	81	773	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	144	1799	30.0	15	True	NA	NA
PB.6495.1	chr2	+	2772	3	intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	438	junction_1	13.5	NA	0	NA	FALSE	NA	NA	NA	A	coding	137	414	1887	2300	70.0	-2002	False	NA	NA
PB.6414.14	chr2	-	4007	18	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	61	0	any annotated donor/acceptor	FALSE	canonical	1	6368	junction_3	154119.31518890674	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	164	1660	65.0	-5	True	AAAAAG	-20
PB.7182.1	chr20	-	5175	26	full-splice_match	KIF16B	ENST00000354981.6	5261	26	85	1	85	-1	multi-exon	TRUE	canonical	1	52538	junction_14	12608.435113050311	NA	0	NA	TRUE	NA	NA	NA	C	coding	1317	3954	74	4027	20.0	0	True	ATTAAA	-17
PB.6414.16	chr2	-	2992	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	95	6955	80	-1022	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	5	NA	TRUE	NA	NA	NA	C	coding	551	1656	229	1884	50.0	14	True	NA	NA
PB.6414.17	chr2	-	2947	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	41	-1022	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	2	NA	TRUE	NA	NA	NA	C	coding	551	1656	184	1839	50.0	122	False	NA	NA
PB.6414.10	chr2	-	4460	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	80	5502	65	431	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	244	1899	75.0	-1	True	NA	NA
PB.6414.11	chr2	-	4383	17	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	58	431	combination_of_known_junctions	FALSE	canonical	1	38791	junction_16	104676.29408978469	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	167	1822	75.0	-8	True	NA	NA
PB.11759.1	chr9	-	4687	8	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	2603	4796	any annotated donor/acceptor	FALSE	canonical	1	3871	junction_1	108580.78946732216	NA	3	NA	TRUE	NA	NA	NA	C	coding	416	1251	92	1342	15.0	-4	True	NA	NA
PB.6414.13	chr2	-	4041	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	68	5933	53	0	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	256	1911	65.0	-13	True	AAAAAG	-20
PB.278.16	chr1	+	4477	16	incomplete-splice_match	ZMYM4	ENST00000314607.10	6994	30	120979	3	-2734	-3	5prime_fragment	FALSE	canonical	1	241978	junction_11	55975.447688984335	NA	3	NA	TRUE	NA	NA	NA	C	coding	736	2211	3	2213	10.0	-4249	False	AATAAA	-17
PB.7182.3	chr20	-	1948	18	incomplete-splice_match	KIF16B	ENST00000408042.5	4640	23	49	14850	49	-1943	3prime_fragment	FALSE	canonical	1	52538	junction_6	11935.375382844553	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1839	110	1948	30.0	63	False	AGTAAA	-4
PB.11054.8	chr8	+	2280	3	incomplete-splice_match	ESCO2	ENST00000305188.12	3922	11	168	26798	0	-1577	3prime_fragment	FALSE	canonical	1	86831	junction_1	18831.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	71	955	45.0	0	True	ATTAAA	-18
PB.8435.36	chr3	+	3989	4	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	10	83	combination_of_known_junctions	FALSE	canonical	1	14260	junction_2	32642.36689062578	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	304	3882	75.0	3	True	NA	NA
PB.9242.3	chr5	-	2874	10	novel_in_catalog	ERCC8	novel	2236	13	NA	NA	3	-764	combination_of_known_junctions	FALSE	canonical	1	7009	junction_1	38075.97789637755	NA	1	NA	TRUE	NA	NA	NA	C	coding	426	1281	63	1343	75.0	-1	True	AATAAA	-16
PB.2445.1	chr12	+	3586	19	novel_not_in_catalog	CLSTN3	novel	570	5	NA	NA	-62	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_18	137637.11984508394	NA	1	NA	TRUE	NA	NA	NA	C	coding	956	2871	284	3154	65.0	-5	True	AATAAA	-9
PB.2445.2	chr12	+	3994	18	full-splice_match	CLSTN3	ENST00000266546.10	4185	18	178	13	-51	0	multi-exon	FALSE	canonical	1	277656	junction_1	96929.6402814253	NA	2	NA	TRUE	NA	NA	NA	C	coding	956	2871	273	3143	65.0	6	True	AATAAA	-9
PB.11671.8	chr9	+	3619	17	full-splice_match	TDRD7	ENST00000355295.4	3834	17	211	4	211	-4	multi-exon	FALSE	canonical	1	64159	junction_1	41967.222128136425	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3297	85	3381	40.0	65	True	AATAAA	-16
PB.11933.2	chr9	+	2440	4	incomplete-splice_match	TUBBP5	ENST00000503395.5	1735	5	23955	-923	-917	-2	5prime_fragment	FALSE	canonical	1	3413	junction_2	6854.2062187308675	NA	0	NA	TRUE	NA	NA	NA	B	coding	298	897	1377	2273	15.0	NA	False	AATAAA	-13
PB.7090.1	chr2	+	1640	8	novel_in_catalog	LRRFIP1	novel	2775	24	NA	NA	-3	-1542	combination_of_known_junctions	FALSE	canonical	1	60914	junction_1	103589.80541795903	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1566	73	1638	80.0	-22	True	NA	NA
PB.10391.14	chr7	-	1970	13	full-splice_match	CYTH3	ENST00000350796.7	4505	13	0	2535	0	429	multi-exon	FALSE	canonical	1	62791	junction_12	76254.79549328175	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	138	1337	45.0	-35	True	TATAAA	-21
PB.10391.15	chr7	-	3259	9	incomplete-splice_match	CYTH3	ENST00000350796.7	4505	13	-4	6464	-4	-2506	3prime_fragment	FALSE	canonical	1	62791	junction_8	73587.8842575325	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	142	1095	100.0	-39	True	NA	NA
PB.7234.1	chr20	+	5696	12	novel_in_catalog	ASXL1	novel	7053	13	NA	NA	-184	2	combination_of_known_junctions	FALSE	canonical	1	25076	junction_2	110684.55284835219	NA	0	NA	TRUE	NA	NA	NA	A	coding	1512	4539	79	4617	20.0	-573	False	ATTAAA	-23
PB.10391.13	chr7	-	2468	13	full-splice_match	CYTH3	ENST00000350796.7	4505	13	20	2017	20	947	multi-exon	FALSE	canonical	1	62791	junction_12	76254.79549328175	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	118	1317	50.0	-15	True	AATAGA	-6
PB.10391.10	chr7	-	4409	13	novel_not_in_catalog	CYTH3	novel	4505	13	NA	NA	42	-8	any annotated donor/acceptor	FALSE	canonical	1	84	junction_6	95685.35184264099	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	710	1249	45.0	7	True	AATAAA	-16
PB.5218.11	chr17	-	2946	1	novel_in_catalog	LINC00511	novel	2929	6	NA	NA	3208	4155	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	5182	False	NA	NA
PB.5218.10	chr17	-	3415	1	novel_in_catalog	LINC00511	novel	2929	6	NA	NA	3208	4624	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	5182	False	NA	NA
PB.653.6	chr1	-	3933	2	novel_not_in_catalog	ZNF697	novel	5041	3	NA	NA	-445	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	B	coding	136	411	241	651	15.0	47	True	ATTAAA	-17
PB.7090.2	chr2	+	1675	8	full-splice_match	LRRFIP1	ENST00000289175.10	3709	8	174	1860	-14	-1542	multi-exon	FALSE	canonical	1	175105	junction_2	61060.701233297674	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1536	138	1673	80.0	-14	True	NA	NA
PB.6883.2	chr2	-	3089	10	incomplete-splice_match	PDE1A	ENST00000351439.9	2338	14	9	31997	-8	24048	3prime_fragment	FALSE	canonical	1	43839	junction_9	16139.150033458054	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	410	1684	10.0	-4	True	TATAAA	-32
PB.653.1	chr1	-	5137	3	novel_not_in_catalog	ZNF697	novel	5041	3	NA	NA	-474	2	any annotated donor/acceptor	FALSE	canonical	1	26754	junction_2	32543.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	545	1638	215	1852	15.0	18	True	ATTAAA	-20
PB.6883.1	chr2	-	2277	14	full-splice_match	PDE1A	ENST00000351439.9	2338	14	13	48	-4	4	multi-exon	FALSE	canonical	1	42146	junction_1	17272.4498856779	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	406	1965	20.0	0	True	AATAAA	-18
PB.11110.16	chr8	+	3075	19	novel_in_catalog	IKBKB	novel	3938	22	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	1	9917	junction_2	103541.4451413086	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	255	2150	40.0	8	True	ATTAAA	-13
PB.11110.14	chr8	+	5169	20	novel_in_catalog	IKBKB	novel	3938	22	NA	NA	0	1	intron_retention	FALSE	canonical	1	82115	junction_1	91299.00406868367	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	171	1769	50.0	0	True	NA	NA
PB.11110.15	chr8	+	3497	21	incomplete-splice_match	IKBKB	ENST00000649612.1	3912	22	1	2113	0	-730	3prime_fragment	FALSE	canonical	1	82115	junction_1	89086.24916533133	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	170	2587	25.0	1	True	AATAAA	-16
PB.653.8	chr1	-	4872	3	novel_not_in_catalog	ZNF697	novel	5041	3	NA	NA	-491	-280	any annotated donor/acceptor	FALSE	canonical	1	26754	junction_2	32543.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	545	1638	232	1869	65.0	1	True	NA	NA
PB.653.9	chr1	-	2306	3	novel_not_in_catalog	ZNF697	novel	5041	3	NA	NA	-493	-2848	any annotated donor/acceptor	FALSE	canonical	1	26754	junction_2	32543.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	545	1638	234	1871	25.0	-1	True	AATAAA	-20
PB.11110.10	chr8	+	3921	22	full-splice_match	IKBKB	ENST00000649612.1	3912	22	0	-9	0	-1	multi-exon	FALSE	canonical	1	82115	junction_1	87085.4030442455	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	171	2441	45.0	0	True	NA	NA
PB.7090.4	chr2	+	1945	10	full-splice_match	LRRFIP1	ENST00000244815.9	4370	10	-71	2496	0	-1542	multi-exon	FALSE	canonical	1	36646	junction_2	127841.80473712206	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1632	312	1943	80.0	-3626	False	NA	NA
PB.8200.1	chr3	+	2771	16	novel_in_catalog	PXK	novel	2037	18	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	4411	junction_15	101046.3491716329	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	112	1611	35.0	-59	True	ATTAAA	-9
PB.6489.3	chr2	-	4906	25	full-splice_match	XPO1	ENST00000401558.6	4915	25	-80	89	-80	-3	multi-exon	FALSE	canonical	1	779959	junction_24	270173.5977223204	NA	12	1	TRUE	NA	NA	NA	C	coding	1067	3204	821	4024	15.0	-15	True	AATAAA	-12
PB.7919.1	chr3	+	1842	7	full-splice_match	OGG1	ENST00000302036.11	2220	7	301	77	-101	-8	multi-exon	FALSE	canonical	1	40535	junction_6	108566.7353572856	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	43	1317	30.0	-117	False	AATAAA	-25
PB.9515.2	chr5	+	4167	1	full-splice_match	PCDHB11	ENST00000354757.4	4198	1	29	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	797	2394	165	2558	25.0	-16	True	AATAAA	-30
PB.9515.1	chr5	+	4082	1	full-splice_match	PCDHB11	ENST00000354757.4	4198	1	-1	117	-1	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	797	2394	195	2588	25.0	-2	True	AATATA	-17
PB.7919.2	chr3	+	1869	6	full-splice_match	OGG1	ENST00000339511.9	1815	6	-29	-25	8	-5	multi-exon	FALSE	canonical	1	149177	junction_3	85053.36932914534	NA	4	NA	TRUE	NA	NA	NA	C	coding	324	975	336	1310	35.0	0	True	AATAAA	-18
PB.6489.8	chr2	-	4905	26	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-13	0	intron_retention	FALSE	canonical	1	7566	junction_25	423799.56346673885	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	816	4019	15.0	-16	True	AATAAA	-16
PB.6489.9	chr2	-	4842	26	novel_in_catalog	XPO1	novel	4915	25	NA	NA	0	0	intron_retention	FALSE	canonical	1	73514	junction_23	412202.5885560332	NA	3	1	TRUE	NA	NA	NA	C	coding	940	2823	1134	3956	15.0	14	True	AATAAA	-16
PB.7090.6	chr2	+	3675	8	full-splice_match	LRRFIP1	ENST00000289175.10	3709	8	17	17	17	-17	multi-exon	FALSE	canonical	1	175105	junction_2	61060.701233297674	NA	4	NA	TRUE	NA	NA	NA	C	coding	752	2259	295	2553	90.0	-51	True	NA	NA
PB.6938.1	chr2	-	3187	11	full-splice_match	CLK1	ENST00000473565.5	3208	11	25	-4	-4	0	multi-exon	TRUE	canonical	1	740693	junction_10	275712.7631919857	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	1957	2958	30.0	-9	True	AATAAA	-22
PB.6938.2	chr2	-	4022	9	novel_in_catalog	CLK1	novel	1888	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	740693	junction_8	303504.67659700074	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	1982	2386	30.0	-1	True	AATAAA	-21
PB.5554.2	chr19	+	1548	10	full-splice_match	WDR18	ENST00000585809.5	1608	10	59	1	-2	-1	multi-exon	FALSE	canonical	1	475714	junction_4	89215.56731013449	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	25	1323	0.0	-16	True	NA	NA
PB.5554.3	chr19	+	2011	9	novel_in_catalog	WDR18	novel	1608	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	509172	junction_1	76838.93448270544	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	932	1798	0.0	-4	True	NA	NA
PB.6981.13	chr2	+	1800	7	full-splice_match	RPE	ENST00000436630.6	1128	7	44	-716	0	-410	multi-exon	FALSE	canonical	1	23009	junction_2	55178.729475727836	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	35	775	65.0	-15	True	NA	NA
PB.5554.1	chr19	+	2360	8	novel_in_catalog	WDR18	novel	1608	10	NA	NA	-5	-6	intron_retention	FALSE	canonical	1	509172	junction_1	80941.06236626495	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	1274	2140	0.0	-19	True	NA	NA
PB.6981.15	chr2	+	1480	7	novel_not_in_catalog	RPE	novel	2569	6	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	9956	junction_6	59960.48507975899	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	29	715	35.0	-9	True	AATAAA	-22
PB.6981.14	chr2	+	3158	6	novel_not_in_catalog	RPE	novel	2569	6	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	66212.51047770353	NA	27	4	TRUE	NA	NA	NA	C	coding	219	660	31	690	40.0	-11	True	AATAAA	-20
PB.6981.17	chr2	+	2389	6	full-splice_match	RPE	ENST00000359429.10	2569	6	69	111	0	-111	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	29	715	50.0	-9	True	ATTAAA	-21
PB.6981.16	chr2	+	2526	7	novel_in_catalog	RPE	novel	2569	6	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	11590	junction_2	61731.84785739764	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	273	746	35.0	-9	True	AATAAA	-20
PB.10651.5	chr7	+	2377	12	full-splice_match	DBF4	ENST00000431138.5	2342	12	-33	-2	14	-1	multi-exon	FALSE	canonical	1	1070	junction_8	86111.1679910153	NA	6	NA	TRUE	NA	NA	NA	C	coding	450	1353	813	2165	30.0	8	True	AATAAA	-26
PB.10651.4	chr7	+	2490	12	novel_not_in_catalog	DBF4	novel	2694	12	NA	NA	6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	86556.29224779646	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	925	2277	25.0	0	True	AATAAA	-27
PB.10651.7	chr7	+	1928	12	novel_in_catalog	DBF4	novel	2694	12	NA	NA	15	-422	combination_of_known_junctions	FALSE	canonical	1	1070	junction_8	86397.50279267288	NA	1	1	TRUE	NA	NA	NA	C	coding	603	1809	119	1927	55.0	10	True	GATAAA	-20
PB.10651.6	chr7	+	1780	11	novel_in_catalog	DBF4	novel	2694	12	NA	NA	-4	-484	no_combination_of_known_junctions	FALSE	canonical	1	1070	junction_8	15731.575942670208	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	155	1138	60.0	-26	True	AATACA	-28
PB.10651.1	chr7	+	2349	12	full-splice_match	DBF4	ENST00000265728.5	3907	12	392	1166	21	-1	multi-exon	FALSE	canonical	1	1070	junction_8	86368.85612120813	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	113	2137	30.0	16	True	AATAAA	-26
PB.10651.2	chr7	+	2240	11	novel_in_catalog	DBF4	novel	2694	12	NA	NA	5	-1	no_combination_of_known_junctions	FALSE	canonical	1	1070	junction_8	15731.575942670208	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	129	1112	30.0	0	True	AATAAA	-26
PB.11253.2	chr8	+	3015	5	full-splice_match	SDC2	ENST00000302190.8	3759	5	402	342	-60	-342	multi-exon	FALSE	canonical	1	703003	junction_1	98841.16545593491	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	607	1125	30.0	-60	False	ATTAAA	-15
PB.11218.1	chr8	+	4032	25	full-splice_match	WWP1	ENST00000517970.5	4686	25	-93	747	-93	280	multi-exon	FALSE	canonical	1	48261	junction_24	72587.2607153964	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	401	3169	45.0	-6	True	AATAAA	-30
PB.8749.4	chr4	+	6119	19	novel_not_in_catalog	N4BP2	novel	9744	18	NA	NA	27	-3	any annotated donor/acceptor	FALSE	canonical	1	15580	junction_18	37889.400449136985	NA	2	NA	TRUE	NA	NA	NA	C	coding	1770	5313	390	5702	35.0	3	True	AATAAA	-11
PB.278.3	chr1	+	7296	30	novel_not_in_catalog	ZMYM4	novel	6994	30	NA	NA	-294	-1	any annotated donor/acceptor	FALSE	canonical	1	3826	junction_1	94481.27265571983	NA	1	NA	TRUE	NA	NA	NA	C	coding	1551	4656	375	5030	10.0	-36	True	AATAAA	-19
PB.10419.8	chr7	-	6537	2	novel_in_catalog	TWISTNB	novel	3942	4	NA	NA	45	-99	intron_retention	FALSE	canonical	1	314075	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	27	467	75.0	-17	True	NA	NA
PB.10419.7	chr7	-	2177	3	novel_in_catalog	TWISTNB	novel	3942	4	NA	NA	62	56	intron_retention	FALSE	canonical	1	261121	junction_1	26477.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	10	663	75.0	0	True	NA	NA
PB.10419.6	chr7	-	5435	3	novel_in_catalog	TWISTNB	novel	3942	4	NA	NA	52	150	intron_retention	FALSE	canonical	1	314075	junction_2	22805.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	414	5022	5435	85.0	-10	True	NA	NA
PB.10419.5	chr7	-	2163	4	full-splice_match	TWISTNB	ENST00000222567.5	3942	4	40	1739	40	1364	multi-exon	FALSE	canonical	1	261121	junction_2	40276.19735719294	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	32	1048	45.0	-22	True	NA	NA
PB.10419.4	chr7	-	2623	4	full-splice_match	TWISTNB	ENST00000222567.5	3942	4	50	1269	50	-1269	multi-exon	FALSE	canonical	1	261121	junction_2	40276.19735719294	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	22	1038	20.0	-12	True	NA	NA
PB.10419.3	chr7	-	3689	4	full-splice_match	TWISTNB	ENST00000222567.5	3942	4	53	200	53	-200	multi-exon	FALSE	canonical	1	261121	junction_2	40276.19735719294	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	19	1035	35.0	-9	True	AATAAA	-16
PB.8200.3	chr3	+	1823	18	novel_in_catalog	PXK	novel	2037	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	42316	junction_17	121216.23740390502	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	106	1650	40.0	-53	True	AATACA	-9
PB.10419.1	chr7	-	3912	4	full-splice_match	TWISTNB	ENST00000222567.5	3942	4	29	1	29	-1	multi-exon	FALSE	canonical	1	261121	junction_2	40276.19735719294	NA	20	NA	TRUE	NA	NA	NA	C	coding	338	1017	43	1059	15.0	-33	True	AATAAA	-19
PB.778.1	chr1	+	2929	10	full-splice_match	IL6R	ENST00000368485.7	5914	10	386	2599	-36	-26	multi-exon	FALSE	canonical	1	68191	junction_1	27166.910530602807	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	52	1458	85.0	-3	True	NA	NA
PB.6007.2	chr19	+	2572	14	incomplete-splice_match	LTBP4	ENST00000243562.13	3140	19	3595	1	-32	-1	5prime_fragment	FALSE	canonical	1	444173	junction_4	264061.8614865681	NA	0	NA	TRUE	NA	NA	NA	B	coding	497	1494	813	2306	5.0	-9643	False	ATTAAA	-15
PB.2598.2	chr12	-	4756	14	novel_not_in_catalog	NCKAP5L	novel	4235	5	NA	NA	12	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	52323.07246160612	NA	0	NA	TRUE	NA	NA	NA	C	coding	1334	4005	191	4195	5.0	-1	True	AATAAA	-15
PB.2598.1	chr12	-	4889	13	full-splice_match	NCKAP5L	ENST00000335999.6	4900	13	6	5	6	-5	multi-exon	TRUE	canonical	1	77246	junction_11	35125.04426173566	NA	0	NA	TRUE	NA	NA	NA	C	coding	1334	4005	197	4201	5.0	-7	True	AATAAA	-16
PB.6007.1	chr19	+	4830	29	novel_in_catalog	LTBP4	novel	723	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	122726	junction_19	261562.66890693348	NA	2	1	TRUE	NA	NA	NA	B	coding	1513	4542	22	4563	5.0	-2	True	ATTAAA	-16
PB.6007.4	chr19	+	2451	13	incomplete-splice_match	LTBP4	ENST00000243562.13	3140	19	4104	-1	-66	0	5prime_fragment	FALSE	canonical	1	444173	junction_3	269457.3149106057	NA	0	NA	TRUE	NA	NA	NA	B	coding	722	2169	15	2183	0.0	-9824	False	ATTAAA	-17
PB.5045.1	chr17	+	3253	4	full-splice_match	CCDC103	ENST00000357776.6	849	4	-15	-2389	-11	-201	multi-exon	FALSE	canonical	1	3532	junction_1	15858.580348400252	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	1894	3135	15.0	-38	True	NA	NA
PB.5045.3	chr17	+	3432	4	full-splice_match	CCDC103	ENST00000417826.2	3397	4	-32	-3	3	3	multi-exon	FALSE	canonical	1	17242	junction_1	9416.719740263414	NA	3	NA	TRUE	NA	NA	NA	C	coding	413	1242	1869	3110	5.0	3	True	NA	NA
PB.5045.2	chr17	+	1749	4	full-splice_match	FAM187A	ENST00000412523.3	1748	4	11	-12	11	12	multi-exon	FALSE	canonical	1	17242	junction_1	9416.719740263414	NA	2	NA	TRUE	NA	NA	NA	A	coding	242	729	147	875	10.0	-16	True	AATAAA	-28
PB.9509.1	chr5	+	3213	1	full-splice_match	PCDHB6	ENST00000231136.3	3266	1	51	2	-29	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	793	2382	189	2570	30.0	-12	True	NA	NA
PB.8633.1	chr3	-	3402	7	full-splice_match	BDH1	ENST00000392378.6	3455	7	53	0	-8	0	multi-exon	FALSE	canonical	1	98238	junction_6	100686.45560683258	NA	2	NA	TRUE	NA	NA	NA	C	coding	343	1032	259	1290	10.0	-30	True	ATTAAA	-15
PB.5144.9	chr17	-	4143	21	novel_in_catalog	TRIM37	novel	634	5	NA	NA	-10	-6	no_combination_of_known_junctions	FALSE	canonical	1	3788	junction_12	97284.3356792346	NA	0	NA	TRUE	NA	NA	NA	C	coding	894	2685	290	2974	30.0	-15	True	AATAAA	-10
PB.5144.5	chr17	-	4248	23	novel_in_catalog	TRIM37	novel	634	5	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	1	45135	junction_1	84158.24714428622	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2778	300	3077	25.0	-25	True	AATAAA	-12
PB.5144.4	chr17	-	4254	23	full-splice_match	TRIM37	ENST00000393065.6	3548	23	74	-780	-12	-5	multi-exon	FALSE	canonical	1	16161	junction_22	81444.57614854736	NA	0	NA	TRUE	NA	NA	NA	C	coding	930	2793	292	3084	25.0	-17	True	AATAAA	-11
PB.5144.7	chr17	-	4246	23	novel_in_catalog	TRIM37	novel	634	5	NA	NA	-30	-4	no_combination_of_known_junctions	FALSE	canonical	1	13254	junction_4	91535.45987646238	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	310	3075	25.0	134	False	AATAAA	-12
PB.5144.6	chr17	-	4307	23	novel_in_catalog	TRIM37	novel	634	5	NA	NA	-13	-4	no_combination_of_known_junctions	FALSE	canonical	1	13235	junction_14	91595.98015927797	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	293	3136	25.0	-18	True	AATAAA	-12
PB.5144.1	chr17	-	3430	25	full-splice_match	TRIM37	ENST00000393066.7	3622	25	163	29	-18	-29	multi-exon	TRUE	canonical	1	41950	junction_1	83985.73237253481	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	298	3192	60.0	-23	True	AAAACA	-34
PB.5144.3	chr17	-	4399	24	novel_in_catalog	TRIM37	novel	634	5	NA	NA	-27	-4	combination_of_known_junctions	FALSE	canonical	1	30003	junction_2	86685.42571550456	NA	1	NA	TRUE	NA	NA	NA	C	coding	973	2922	307	3228	25.0	137	False	AATAAA	-12
PB.5144.2	chr17	-	4341	24	full-splice_match	TRIM37	ENST00000262294.11	4330	24	-15	4	4	-4	multi-exon	FALSE	canonical	1	140425	junction_23	63674.462661721605	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	276	3170	25.0	-1	True	AATAAA	-12
PB.11284.38	chr8	-	2594	12	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	161	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	439036.90812905546	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	591	1682	25.0	-1	True	AGTAAA	-12
PB.964.5	chr1	+	2117	10	full-splice_match	TOR1AIP1	ENST00000528443.6	3685	10	255	1313	0	224	multi-exon	FALSE	canonical	1	206087	junction_2	120786.56879567404	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	207	1961	30.0	0	True	TATAAA	-13
PB.6902.1	chr2	+	4073	2	full-splice_match	C2orf88	ENST00000340623.4	4035	2	-40	2	-40	-2	multi-exon	FALSE	canonical	1	73396	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	103	312	3	314	25.0	-206	False	AATAAA	-16
PB.6683.10	chr2	-	2801	11	novel_not_in_catalog	SEPT10	novel	3091	12	NA	NA	-31	-1	any annotated donor/acceptor	FALSE	canonical	1	3568	junction_8	34936.04134643764	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	142	1479	30.0	-8	True	AATAAA	-39
PB.8749.6	chr4	+	2337	9	incomplete-splice_match	N4BP2	ENST00000261435.10	9744	18	52	38168	-35	17478	3prime_fragment	FALSE	canonical	1	29819	junction_2	22104.255336572074	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1971	365	2335	80.0	28	True	AAGAAA	-44
PB.11817.9	chr9	-	2781	16	novel_not_in_catalog	CIZ1	novel	717	5	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_15	315067.24841239845	NA	3	1	TRUE	NA	NA	NA	C	coding	815	2448	208	2655	20.0	5	True	AATAAA	-16
PB.964.4	chr1	+	2947	10	full-splice_match	TOR1AIP1	ENST00000528443.6	3685	10	737	1	-15	-1	multi-exon	FALSE	canonical	1	206087	junction_2	120786.56879567404	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	88	1479	15.0	-32	True	ATTAAA	-23
PB.8082.1	chr3	+	2403	1	antisense	novelGene_MAP4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	AATGAA	-27
PB.4993.1	chr17	+	1790	4	incomplete-splice_match	NAGLU	ENST00000225927.6	2544	6	2286	3	1520	-3	5prime_fragment	FALSE	canonical	1	257480	junction_3	60827.181009443106	NA	0	NA	TRUE	NA	NA	NA	A	coding	511	1536	47	1582	25.0	-8295	False	ATTAAA	-21
PB.2566.1	chr12	+	2583	5	novel_not_in_catalog	AC008014.1	novel	829	4	NA	NA	-8	-204414	any annotated donor/acceptor	FALSE	canonical	1	313	junction_4	16941.611877268348	NA	19	2	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-6	True	NA	NA
PB.10809.3	chr7	+	5653	30	novel_not_in_catalog	PTPRZ1	novel	8175	30	NA	NA	36	-2	any annotated donor/acceptor	FALSE	canonical	1	11043	junction_22	107589.2330193336	NA	2	NA	TRUE	NA	NA	NA	C	coding	1487	4464	376	4839	15.0	-7	True	AATAAA	-17
PB.5059.6	chr17	-	5082	16	novel_in_catalog	KANSL1	novel	9095	8	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	1	19145	junction_15	86859.33052199338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	266	3574	85.0	NA	False	NA	NA
PB.5059.7	chr17	-	5043	15	full-splice_match	KANSL1	ENST00000432791.6	5343	15	248	52	-150	-12	multi-exon	FALSE	canonical	1	97512	junction_14	65601.92363814883	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	227	3535	85.0	-36	True	NA	NA
PB.10884.16	chr7	-	3431	16	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	744	junction_13	78102.26497953394	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	414	926	30.0	5	True	AATAAA	-12
PB.5059.1	chr17	-	4887	15	novel_in_catalog	KANSL1	novel	9095	8	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	1	19145	junction_14	96217.4946585726	NA	1	NA	TRUE	NA	NA	NA	C	coding	1039	3120	260	3379	85.0	NA	False	NA	NA
PB.8191.10	chr3	+	2017	21	incomplete-splice_match	APPL1	ENST00000288266.7	6058	22	89	5005	-5	442	3prime_fragment	FALSE	canonical	1	166360	junction_1	75911.69666065961	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	59	2017	65.0	-44	False	NA	NA
PB.8623.1	chr3	+	3679	3	full-splice_match	FBXO45	ENST00000440469.1	3689	3	8	2	8	-2	multi-exon	FALSE	canonical	1	4502	junction_1	104146.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	107	324	389	712	25.0	-232	False	ATTAAA	-16
PB.5059.8	chr17	-	5055	15	full-splice_match	KANSL1	ENST00000262419.10	5309	15	242	12	242	-12	multi-exon	FALSE	canonical	1	9221	junction_14	81760.06108418581	NA	1	NA	TRUE	NA	NA	NA	C	coding	1102	3309	239	3547	85.0	919	False	NA	NA
PB.12265.2	chrX	-	4092	15	full-splice_match	ENOX2	ENST00000394363.5	4174	15	82	0	-1	0	multi-exon	FALSE	canonical	1	60826	junction_12	17126.7408208	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	418	2163	90.0	-2	True	NA	NA
PB.12265.3	chrX	-	4171	16	novel_not_in_catalog	ENOX2	novel	3963	14	NA	NA	3	0	intron_retention	FALSE	canonical	1	11448	junction_13	37079.4829794951	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	416	2242	90.0	2	True	NA	NA
PB.12265.1	chrX	-	5260	16	full-splice_match	ENOX2	ENST00000338144.7	4263	16	64	-1061	-19	1045	multi-exon	FALSE	canonical	1	11448	junction_13	33043.331915935276	NA	1	1	TRUE	NA	NA	NA	C	coding	610	1833	438	2270	35.0	-20	True	AATAAA	-22
PB.12265.6	chrX	-	3573	15	full-splice_match	ENOX2	ENST00000394363.5	4174	15	84	517	1	0	multi-exon	FALSE	canonical	1	60826	junction_12	17126.7408208	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	416	2161	10.0	0	True	GATAAA	-19
PB.12265.7	chrX	-	3494	15	novel_in_catalog	ENOX2	novel	3963	14	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2492	junction_13	35475.512984166926	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	250	2082	10.0	-1	True	GATAAA	-19
PB.12265.4	chrX	-	3469	14	full-splice_match	ENOX2	ENST00000370935.5	3963	14	-38	532	-38	1	multi-exon	FALSE	canonical	1	13697	junction_12	26660.049451740157	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	311	2056	10.0	-39	False	GATAAA	-20
PB.12265.5	chrX	-	3663	16	full-splice_match	ENOX2	ENST00000338144.7	4263	16	83	517	0	0	multi-exon	FALSE	canonical	1	11448	junction_13	33043.331915935276	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	419	2251	10.0	-1	True	GATAAA	-19
PB.8983.9	chr4	+	3344	9	incomplete-splice_match	JADE1	ENST00000610919.4	5644	11	4	11307	4	-164	3prime_fragment	FALSE	canonical	1	26985	junction_1	81722.97060945824	NA	2	1	TRUE	NA	NA	NA	C	coding	509	1530	150	1679	30.0	-17	True	AATAAA	-8
PB.12265.8	chrX	-	3367	14	novel_in_catalog	ENOX2	novel	3963	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	3997	junction_9	29756.159582523273	NA	13	3	TRUE	NA	NA	NA	C	coding	512	1539	417	1955	10.0	-1	True	GATAAA	-19
PB.9037.11	chr4	+	2420	10	novel_in_catalog	GUCY1A1	novel	2715	10	NA	NA	135	0	combination_of_known_junctions	FALSE	canonical	1	15400	junction_1	64551.50872513638	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	868	2235	80.0	17	False	NA	NA
PB.7218.1	chr20	+	2310	2	incomplete-splice_match	AL390198.1	ENST00000649818.1	867	3	50	16174	50	-16174	3prime_fragment	FALSE	canonical	1	2500	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-15	True	NA	NA
PB.9331.1	chr5	+	8872	13	incomplete-splice_match	VCAN	ENST00000343200.9	9455	14	-259	986	-50	-19	intron_retention	FALSE	canonical	1	272353	junction_1	178038.61752227537	NA	9	NA	TRUE	NA	NA	NA	C	coding	2335	7008	760	7767	100.0	-582	False	AAAACA	-6
PB.10218.1	chr6	-	2087	8	novel_in_catalog	VNN2	novel	1781	7	NA	NA	0	2	intron_retention	TRUE	canonical	1	2782	junction_7	121587.27503840732	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	93	1655	15.0	-1	True	ATTAAA	-18
PB.10218.2	chr6	-	1960	8	full-splice_match	VNN2	ENST00000525270.5	1608	8	-26	-326	-14	0	multi-exon	FALSE	canonical	1	24514	junction_7	116794.61579426772	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	127	1530	15.0	-19	False	ATTAAA	-16
PB.10218.3	chr6	-	1843	9	novel_in_catalog	VNN2	novel	1781	7	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	10799	junction_4	125770.17082336138	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	617	1414	20.0	2	True	ATTAAA	-15
PB.10218.4	chr6	-	1857	7	novel_in_catalog	VNN2	novel	1781	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	3398	junction_6	78039.54901985417	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	580	1428	20.0	-6	True	ATTAAA	-15
PB.10218.5	chr6	-	3282	1	genic	VNN2	novel	NA	NA	NA	NA	-15	-2736	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-20	False	NA	NA
PB.10973.1	chr8	+	2214	1	antisense	novelGene_PRAG1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	109	330	1558	1887	100.0	NA	False	NA	NA
PB.6753.10	chr2	+	4594	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	-3	2326	0	-1	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	34	2226	25.0	-30	True	ATTAAA	-22
PB.6753.11	chr2	+	4810	10	novel_in_catalog	CCNT2	novel	5414	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	69110	junction_6	60519.47869187079	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	1363	2343	25.0	-29	True	ATTAAA	-21
PB.6753.12	chr2	+	4492	10	full-splice_match	CCNT2	ENST00000295238.10	4491	10	0	-1	0	1	multi-exon	FALSE	canonical	1	125117	junction_6	49775.05278329946	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	31	2022	25.0	-27	True	ATTAAA	-24
PB.6753.13	chr2	+	4709	9	full-splice_match	CCNT2	ENST00000264157.9	6917	9	12	2196	0	129	multi-exon	FALSE	canonical	1	125117	junction_6	50127.71326010693	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	19	2211	30.0	-15	True	ATTAAA	-19
PB.8578.19	chr3	-	2933	15	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	9	-449	no_combination_of_known_junctions	FALSE	canonical	1	6646	junction_14	63714.15560701001	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	435	1826	65.0	-7	True	AAAACA	-28
PB.8578.18	chr3	-	3018	17	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	5	-449	combination_of_known_junctions	FALSE	canonical	1	16472	junction_13	66797.13422227479	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	520	1911	65.0	-13	True	AAAACA	-28
PB.8191.16	chr3	+	5211	23	novel_in_catalog	APPL1	novel	2821	24	NA	NA	22	-879	combination_of_known_junctions	FALSE	canonical	1	9373	junction_1	115997.4791061309	NA	26	NA	TRUE	NA	NA	NA	C	coding	692	2079	231	2309	75.0	-7	True	NA	NA
PB.8578.12	chr3	-	3419	17	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	28	-13	combination_of_known_junctions	FALSE	canonical	1	16472	junction_13	66797.13422227479	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	485	1876	75.0	22	True	NA	NA
PB.8578.10	chr3	-	3247	15	full-splice_match	IGF2BP2	ENST00000421047.3	1711	15	-22	-1514	-22	-12	multi-exon	FALSE	canonical	1	12261	junction_14	63002.920830777235	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	93	1703	80.0	4157	False	NA	NA
PB.8578.17	chr3	-	3026	17	novel_not_in_catalog	IGF2BP2	novel	3688	16	NA	NA	-3	-449	any annotated donor/acceptor	FALSE	canonical	1	13317	junction_4	57480.23391009622	NA	1	NA	TRUE	NA	NA	NA	C	coding	467	1404	56	1459	65.0	-9	True	AAAACA	-28
PB.8578.16	chr3	-	4371	15	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	1	-449	intron_retention	FALSE	canonical	1	40657	junction_13	57544.617514213634	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	64	1827	65.0	-17	True	AAAACA	-28
PB.8578.15	chr3	-	2707	15	full-splice_match	IGF2BP2	ENST00000346192.7	3291	15	135	449	3	-449	multi-exon	FALSE	canonical	1	21258	junction_6	62593.614864302355	NA	2	NA	TRUE	NA	NA	NA	C	coding	488	1467	134	1600	65.0	421	False	AAAACA	-28
PB.8578.14	chr3	-	2790	14	novel_in_catalog	IGF2BP2	novel	3688	16	NA	NA	-1	-429	no_combination_of_known_junctions	FALSE	canonical	1	6646	junction_13	67047.77335160568	NA	2	NA	TRUE	NA	NA	NA	C	coding	420	1263	401	1663	40.0	-7	True	NA	NA
PB.2531.12	chr12	-	3053	6	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	-569	-9	any annotated donor/acceptor	FALSE	canonical	1	2631	junction_5	53226.21166680943	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	269	934	45.0	1503	False	AATAAA	-15
PB.2531.13	chr12	-	2980	6	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	251	-9	any annotated donor/acceptor	FALSE	canonical	1	1100	junction_5	53612.50520317065	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	196	861	45.0	2323	False	AATAAA	-15
PB.2531.10	chr12	-	3165	6	novel_in_catalog	SINHCAF	novel	3111	5	NA	NA	-91	-9	combination_of_known_junctions	FALSE	canonical	1	4172	junction_5	52841.71046966591	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	381	1046	45.0	649	False	AATAAA	-15
PB.2531.11	chr12	-	2801	6	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	204	-90	any annotated donor/acceptor	FALSE	canonical	1	14570	junction_4	49626.76811802275	NA	5	NA	TRUE	NA	NA	NA	C	coding	221	666	98	763	15.0	3	True	AATATA	-15
PB.2531.16	chr12	-	2917	5	novel_in_catalog	SINHCAF	novel	3111	5	NA	NA	-44	-9	no_combination_of_known_junctions	FALSE	canonical	1	2506	junction_1	31761.11184294404	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	284	802	45.0	2028	False	AATAAA	-15
PB.2531.17	chr12	-	2833	5	novel_in_catalog	SINHCAF	novel	3111	5	NA	NA	-3	-9	no_combination_of_known_junctions	FALSE	canonical	1	2506	junction_1	48892.55193022757	NA	1	NA	TRUE	NA	NA	NA	C	coding	172	519	200	718	45.0	-17	True	AATAAA	-15
PB.2531.14	chr12	-	3001	7	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	-22	-9	any annotated donor/acceptor	FALSE	canonical	1	4895	junction_6	51830.57618417273	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	217	882	45.0	-1	True	AATAAA	-15
PB.2531.15	chr12	-	2968	6	novel_not_in_catalog	SINHCAF	novel	3111	5	NA	NA	4	-9	any annotated donor/acceptor	FALSE	canonical	1	2506	junction_1	74052.49343431996	NA	4	NA	TRUE	NA	NA	NA	C	coding	172	519	335	853	45.0	-10	True	AATAAA	-15
PB.1025.4	chr1	-	2894	1	incomplete-splice_match	ZNF281	ENST00000294740.3	4891	2	433	1790	369	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	854	2565	42	2606	90.0	1029	False	NA	NA
PB.8191.17	chr3	+	3831	22	novel_not_in_catalog	APPL1	novel	2821	24	NA	NA	-4	-2098	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	104419.82853206887	NA	1	1	TRUE	NA	NA	NA	C	coding	360	1083	15	1097	50.0	0	True	AGTAAA	-14
PB.271.1	chr1	-	4549	15	novel_not_in_catalog	PHC2	novel	3789	13	NA	NA	262	0	any annotated donor/acceptor	FALSE	canonical	1	3553	junction_10	432184.5504230661	NA	1	NA	TRUE	NA	NA	NA	C	coding	881	2646	665	3310	0.0	2927	False	AATAAA	-14
PB.12271.3	chrX	-	4026	9	full-splice_match	GPC4	ENST00000370828.3	4960	9	3	931	3	-931	multi-exon	FALSE	canonical	1	222761	junction_7	51092.67837897618	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	523	2193	15.0	1	True	AATAAA	-15
PB.12271.5	chrX	-	2664	9	full-splice_match	GPC4	ENST00000370828.3	4960	9	-34	2330	-34	-2330	multi-exon	FALSE	canonical	1	222761	junction_7	51092.67837897618	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	560	2230	25.0	-4	True	ATTAAA	-16
PB.12271.4	chrX	-	3882	10	novel_not_in_catalog	GPC4	novel	4960	9	NA	NA	-2	-930	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	106121.93806707032	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	378	2048	15.0	-4	True	AATAAA	-16
PB.271.3	chr1	-	2338	7	full-splice_match	PHC2	ENST00000373418.7	2550	7	212	0	-23	0	multi-exon	FALSE	canonical	1	259886	junction_6	319415.34514975775	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	128	1099	0.0	225	False	AATAAA	-14
PB.3626.5	chr14	+	2265	5	incomplete-splice_match	RIN3	ENST00000418924.6	3592	9	76244	0	-23	0	5prime_fragment	FALSE	canonical	1	217147	junction_4	35252.771646354275	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	34	1530	40.0	-5	True	AATAAA	-11
PB.3626.6	chr14	+	2073	1	novel_in_catalog	RIN3	novel	3859	10	NA	NA	-259	2199	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	339	1020	18	1037	90.0	2	True	NA	NA
PB.9061.5	chr4	-	2670	1	novel_in_catalog	CBR4	novel	1198	6	NA	NA	16526	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-16
PB.3626.1	chr14	+	3846	10	full-splice_match	RIN3	ENST00000216487.11	3859	10	9	4	9	3	multi-exon	FALSE	canonical	1	54606	junction_1	88118.6080463411	NA	1	NA	TRUE	NA	NA	NA	C	coding	985	2958	151	3108	25.0	2	True	AATAAA	-14
PB.3626.2	chr14	+	3714	9	novel_in_catalog	RIN3	novel	3859	10	NA	NA	6	0	intron_retention	FALSE	canonical	1	17796	junction_7	80876.45031427566	NA	1	NA	TRUE	NA	NA	NA	C	coding	941	2826	154	2979	40.0	-1	True	AATAAA	-11
PB.3626.3	chr14	+	3866	10	novel_not_in_catalog	RIN3	novel	3859	10	NA	NA	8	0	intron_retention	FALSE	canonical	1	3606	junction_3	104255.5850186466	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	1188	3131	40.0	1	True	AATAAA	-11
PB.1165.2	chr1	-	2991	15	full-splice_match	LIN9	ENST00000328205.9	3567	15	569	7	8	-7	multi-exon	FALSE	canonical	1	74000	junction_10	18622.04100258725	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	26	1654	40.0	-1	True	AATAAA	-11
PB.1025.3	chr1	-	3042	2	full-splice_match	ZNF281	ENST00000367353.1	3080	2	-49	87	-2	-65	multi-exon	FALSE	canonical	1	46438	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	895	2688	132	2819	45.0	-1	True	ATTAAA	-22
PB.1165.1	chr1	-	2885	14	full-splice_match	LIN9	ENST00000460719.5	2909	14	9	15	9	-7	multi-exon	FALSE	canonical	1	31512	junction_11	26539.17523900967	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	25	1548	40.0	0	True	AATAAA	-11
PB.8191.14	chr3	+	2555	22	novel_not_in_catalog	APPL1	novel	2821	24	NA	NA	13	1953	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	104419.82853206887	NA	2	1	TRUE	NA	NA	NA	C	coding	360	1083	135	1217	35.0	-16	True	NA	NA
PB.10696.3	chr7	+	2454	17	novel_in_catalog	AC004922.1	novel	2430	17	NA	NA	6	45	no_combination_of_known_junctions	FALSE	canonical	1	2212	junction_8	1395533.2100514483	NA	1	NA	TRUE	NA	NA	NA	B	coding	704	2115	131	2245	70.0	-6	True	NA	NA
PB.10968.1	chr8	-	3009	1	full-splice_match	AC016065.1	ENST00000606853.1	1137	1	-24	-1848	-18	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-19	True	AATAAA	-18
PB.8609.12	chr3	-	3416	23	full-splice_match	ACAP2	ENST00000326793.10	7160	23	92	3652	57	127	multi-exon	FALSE	canonical	1	161944	junction_13	70460.51339591935	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	140	2476	55.0	27	True	TTTAAA	-26
PB.8609.13	chr3	-	3306	23	full-splice_match	ACAP2	ENST00000326793.10	7160	23	75	3779	40	0	multi-exon	FALSE	canonical	1	161944	junction_13	70460.51339591935	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	157	2493	45.0	10	True	AATAAA	-18
PB.8609.10	chr3	-	7006	22	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	47	-14	intron_retention	FALSE	canonical	1	2915	junction_21	92935.78839099001	NA	4	NA	TRUE	NA	NA	NA	C	coding	734	2205	224	2428	15.0	17	True	AATAAA	-14
PB.8609.11	chr3	-	4594	23	full-splice_match	ACAP2	ENST00000326793.10	7160	23	57	2509	22	1270	multi-exon	FALSE	canonical	1	161944	junction_13	70460.51339591935	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	175	2511	70.0	-8	True	AAGAAA	-12
PB.8609.16	chr3	-	3154	24	novel_not_in_catalog	ACAP2	novel	7160	23	NA	NA	0	243	intron_retention	FALSE	canonical	1	6448	junction_20	105940.99478338762	NA	2	NA	TRUE	NA	NA	NA	C	coding	806	2421	197	2617	15.0	-30	True	AATATA	-18
PB.8609.17	chr3	-	3041	23	full-splice_match	ACAP2	ENST00000326793.10	7160	23	64	4055	29	243	multi-exon	FALSE	canonical	1	161944	junction_13	70460.51339591935	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	168	2504	15.0	-1	True	AATATA	-18
PB.8609.14	chr3	-	3314	23	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	-91	-1	intron_retention	FALSE	canonical	1	3670	junction_22	90696.64745341614	NA	6	NA	TRUE	NA	NA	NA	C	coding	734	2205	298	2502	40.0	3876	False	AATAAA	-17
PB.8609.15	chr3	-	3225	23	full-splice_match	ACAP2	ENST00000326793.10	7160	23	54	3881	19	-102	multi-exon	FALSE	canonical	1	161944	junction_13	70460.51339591935	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	178	2514	60.0	-11	True	AAAAAG	-25
PB.1916.4	chr11	-	4704	17	novel_in_catalog	AMBRA1	novel	5023	19	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	16203	junction_9	53008.873211237005	NA	1	NA	TRUE	NA	NA	NA	C	coding	1119	3360	309	3668	10.0	1	True	ATTAAA	-18
PB.1916.5	chr11	-	4955	18	full-splice_match	AMBRA1	ENST00000533727.5	4817	18	-138	0	39	0	multi-exon	FALSE	canonical	1	62084	junction_10	44232.45058906625	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	380	3919	10.0	190	False	ATTAAA	-18
PB.9799.5	chr6	+	3249	9	novel_not_in_catalog	BTN3A1	novel	1758	10	NA	NA	0	-3	any annotated donor/acceptor	TRUE	canonical	0	0	junction_5	79607.7980389445	NA	6	1	TRUE	NA	NA	NA	B	coding	253	762	354	1115	20.0	-17	True	NA	NA
PB.8210.1	chr3	+	2789	11	novel_not_in_catalog	AC104162.2	novel	1959	5	NA	NA	729	90778	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48333.06621361819	NA	2	NA	TRUE	NA	NA	NA	A	coding	818	2457	218	2674	95.0	21	True	NA	NA
PB.1916.1	chr11	-	5282	18	novel_in_catalog	AMBRA1	novel	5023	19	NA	NA	-8	3	intron_retention	FALSE	canonical	1	81831	junction_10	45820.34646326718	NA	0	NA	TRUE	NA	NA	NA	C	coding	1298	3897	347	4243	10.0	-37	True	ATTAAA	-21
PB.1916.2	chr11	-	5183	17	novel_in_catalog	AMBRA1	novel	5023	19	NA	NA	4	3	intron_retention	TRUE	canonical	1	62084	junction_10	44899.485072040356	NA	0	NA	TRUE	NA	NA	NA	C	coding	1269	3810	335	4144	10.0	-25	True	ATTAAA	-21
PB.1916.3	chr11	-	5016	19	novel_in_catalog	AMBRA1	novel	5023	19	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	1	81831	junction_10	45012.65551606598	NA	0	NA	TRUE	NA	NA	NA	C	coding	1208	3627	351	3977	10.0	-41	True	ATTAAA	-21
PB.2596.5	chr12	-	4202	26	novel_in_catalog	FMNL3	novel	12634	26	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	1	91369	junction_25	66059.50441538598	NA	2	NA	TRUE	NA	NA	NA	C	coding	977	2934	276	3209	10.0	-51	True	CATAAA	-40
PB.2596.4	chr12	-	4349	27	novel_not_in_catalog	FMNL3	novel	12634	26	NA	NA	-38	-3	any annotated donor/acceptor	TRUE	canonical	1	16025	junction_16	80035.77790544048	NA	2	NA	TRUE	NA	NA	NA	C	coding	1027	3084	273	3356	10.0	-48	True	CATAAA	-40
PB.2596.7	chr12	-	3622	25	full-splice_match	FMNL3	ENST00000352151.9	4006	25	92	292	-81	-292	multi-exon	FALSE	canonical	1	91369	junction_24	63445.795508624695	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	122	3052	20.0	103	False	NA	NA
PB.6589.16	chr2	-	1823	5	full-splice_match	TGOLN2	ENST00000398263.6	6138	5	262	4053	-4	-186	multi-exon	FALSE	canonical	1	156723	junction_3	212518.3310568467	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	28	1167	30.0	-1	True	AAAAAG	-23
PB.2596.1	chr12	-	4098	25	full-splice_match	FMNL3	ENST00000352151.9	4006	25	-70	-22	-49	0	multi-exon	FALSE	canonical	1	91369	junction_24	63445.795508624695	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	284	3214	5.0	-59	True	CATAAA	-43
PB.2596.3	chr12	-	2693	15	novel_not_in_catalog	FMNL3	novel	12634	26	NA	NA	-74	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	86589.399590091	NA	3	1	TRUE	NA	NA	NA	C	coding	346	1041	769	1809	5.0	-2	True	CATAAA	-43
PB.2596.2	chr12	-	4173	26	full-splice_match	FMNL3	ENST00000335154.9	12634	26	25	8436	4	-4	multi-exon	FALSE	canonical	1	61766	junction_21	71187.39627676798	NA	1	NA	TRUE	NA	NA	NA	C	coding	1027	3084	210	3293	10.0	15	True	CATAAA	-39
PB.8174.1	chr3	-	4505	16	full-splice_match	NEK4	ENST00000233027.9	6057	16	16	1536	6	-1536	multi-exon	TRUE	canonical	1	24740	junction_8	69834.68953069735	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2526	188	2713	20.0	6	True	NA	NA
PB.340.1	chr1	+	1518	8	full-splice_match	YBX1	ENST00000321358.11	1514	8	0	-4	0	4	multi-exon	FALSE	canonical	1	6335	junction_5	1257022.1272902829	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	140	1114	20.0	9	True	AATAAA	-18
PB.5410.9	chr18	+	4119	12	full-splice_match	RNMT	ENST00000592764.5	4108	12	-10	-1	-10	1	multi-exon	FALSE	canonical	1	19809	junction_11	74010.4025895757	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	208	1722	15.0	13	True	NA	NA
PB.5410.8	chr18	+	3989	11	novel_in_catalog	RNMT	novel	1849	11	NA	NA	-11	0	intron_retention	FALSE	canonical	1	19809	junction_10	86868.10560090511	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	80	1594	20.0	12	True	NA	NA
PB.340.5	chr1	+	5116	6	novel_in_catalog	YBX1	novel	1514	8	NA	NA	0	-7	intron_retention	FALSE	canonical	1	6335	junction_4	1425092.9454301007	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	3406	3789	35.0	9	True	AATAAA	-7
PB.340.4	chr1	+	4192	7	novel_in_catalog	YBX1	novel	1514	8	NA	NA	0	3	intron_retention	FALSE	canonical	1	6335	junction_4	1327223.5107080997	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	3406	3789	20.0	9	True	AATAAA	-17
PB.340.7	chr1	+	4169	5	novel_in_catalog	YBX1	novel	1514	8	NA	NA	4	-1303	intron_retention	FALSE	canonical	1	6335	junction_3	1590285.5636455675	NA	42	1	TRUE	NA	NA	NA	C	coding	127	384	3755	4138	25.0	13	True	AGTAAA	-31
PB.340.6	chr1	+	5030	7	novel_in_catalog	YBX1	novel	1514	8	NA	NA	2	0	intron_retention	FALSE	canonical	1	6335	junction_5	577542.9429086492	NA	5	NA	TRUE	NA	NA	NA	C	coding	263	792	138	929	15.0	11	True	AATAAA	-14
PB.5410.3	chr18	+	1979	12	full-splice_match	RNMT	ENST00000383314.6	6250	12	12	4259	6	14	multi-exon	FALSE	canonical	1	90771	junction_1	48034.1995889258	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	229	1659	10.0	-8	True	CATAAA	-45
PB.5410.2	chr18	+	4276	12	novel_in_catalog	RNMT	novel	1849	11	NA	NA	6	0	intron_retention	FALSE	canonical	1	7956	junction_11	85133.23317954807	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	100	1530	20.0	-8	True	NA	NA
PB.5410.1	chr18	+	1862	11	full-splice_match	RNMT	ENST00000543302.6	1849	11	3	-16	2	16	multi-exon	FALSE	canonical	1	33997	junction_1	64790.278018002056	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	110	1540	10.0	-18	True	GATAAA	-26
PB.5410.7	chr18	+	4397	13	novel_in_catalog	RNMT	novel	1849	11	NA	NA	14	0	intron_retention	FALSE	canonical	1	7956	junction_12	73394.69268557313	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	221	1651	20.0	0	True	NA	NA
PB.5410.6	chr18	+	5774	11	novel_in_catalog	RNMT	novel	1849	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	7915	junction_2	79292.60821318718	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	302	1198	20.0	-6	True	NA	NA
PB.5410.5	chr18	+	6233	12	full-splice_match	RNMT	ENST00000383314.6	6250	12	14	3	8	0	multi-exon	FALSE	canonical	1	90771	junction_1	48034.1995889258	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	227	1657	20.0	-6	True	NA	NA
PB.5410.4	chr18	+	1424	9	incomplete-splice_match	RNMT	ENST00000383314.6	6250	12	14	18280	8	3204	3prime_fragment	FALSE	canonical	1	90771	junction_1	52918.407454306485	NA	1	1	TRUE	NA	NA	NA	C	coding	399	1197	227	1423	65.0	-6	True	AAAACA	-17
PB.9570.29	chr5	-	2557	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	58177	junction_2	627764.0924617372	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	106	1806	45.0	-7	True	CATAAA	-10
PB.9570.28	chr5	-	2761	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	1	5	no_combination_of_known_junctions	FALSE	canonical	1	12384	junction_13	553126.5631253866	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	172	2004	45.0	-9	True	CATAAA	-10
PB.9570.23	chr5	-	1939	11	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	1	4077	junction_3	613872.8136201261	NA	2	1	TRUE	NA	NA	NA	C	coding	372	1119	55	1173	30.0	9820	False	CATAAA	-19
PB.9570.22	chr5	-	2421	17	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	526	junction_1	585308.3519874241	NA	3	1	TRUE	NA	NA	NA	C	coding	598	1797	106	1902	30.0	-7	True	CATAAA	-19
PB.9570.21	chr5	-	2468	16	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	523838.5647555255	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	224	1702	30.0	5	True	CATAAA	-19
PB.9570.20	chr5	-	2530	17	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	507827.3052857104	NA	1	1	TRUE	NA	NA	NA	C	coding	492	1479	286	1764	30.0	-9	True	CATAAA	-19
PB.6290.4	chr2	-	1120	4	full-splice_match	ADI1	ENST00000327435.10	2391	4	179	1092	179	0	multi-exon	FALSE	canonical	1	575355	junction_3	448674.66125195386	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	71	610	20.0	-6	True	AATAAA	-19
PB.9570.26	chr5	-	2621	17	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	630962.2238493629	NA	1	1	TRUE	NA	NA	NA	C	coding	563	1692	171	1862	25.0	-21	True	CATAAA	-18
PB.9570.25	chr5	-	3491	18	novel_not_in_catalog	TNIP1	novel	2680	17	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	5156	junction_2	556306.1998194244	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	113	1894	25.0	-1	True	CATAAA	-18
PB.11780.18	chr9	+	2242	10	full-splice_match	NEK6	ENST00000545174.5	2573	10	-9	340	-9	-340	multi-exon	FALSE	canonical	1	37822	junction_1	217680.49572818677	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	150	1091	40.0	1	True	TATAAA	-28
PB.6678.8	chr2	+	1804	6	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	655	38324	-7	847	3prime_fragment	FALSE	canonical	1	157152	junction_1	32245.782171316605	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1743	60	1802	65.0	-6	True	NA	NA
PB.6678.9	chr2	+	3449	10	novel_not_in_catalog	GCC2	novel	7537	23	NA	NA	-15	1033	any annotated donor/acceptor	FALSE	canonical	1	1313	junction_9	72096.63900318486	NA	4	NA	TRUE	NA	NA	NA	C	coding	1083	3252	68	3319	50.0	-14	True	AATAAA	-8
PB.4179.1	chr16	+	1097	3	full-splice_match	ATP6V0C	ENST00000330398.8	1175	3	79	-1	-27	1	multi-exon	FALSE	canonical	1	2339477	junction_1	291874.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	155	468	156	623	5.0	-23	True	AATAAA	-16
PB.2133.2	chr11	+	3315	23	incomplete-splice_match	PPFIA1	ENST00000389547.7	4133	26	-24	6052	-7	-6	3prime_fragment	FALSE	canonical	1	73245	junction_1	92039.94692053171	NA	1	NA	TRUE	NA	NA	NA	C	coding	1031	3093	223	3315	65.0	-43	True	NA	NA
PB.8599.18	chr3	+	3634	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	333	-2041	333	2041	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	258	1178	35.0	-3	True	TTTAAA	-24
PB.2133.1	chr11	+	5237	28	full-splice_match	PPFIA1	ENST00000253925.11	5234	28	-9	6	-9	0	multi-exon	FALSE	canonical	1	73245	junction_1	85442.0959083555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1202	3609	225	3833	55.0	-45	True	AATAAA	-24
PB.8599.16	chr3	+	2123	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	330	-527	330	527	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	261	1181	30.0	-6	True	ATTAAA	-29
PB.8864.1	chr4	+	2524	8	full-splice_match	ARHGAP24	ENST00000395183.6	2740	8	200	16	200	-16	multi-exon	FALSE	canonical	1	46132	junction_1	22269.642934006893	NA	1	NA	TRUE	NA	NA	NA	A	coding	653	1962	78	2039	50.0	0	True	NA	NA
PB.8599.14	chr3	+	5490	5	incomplete-splice_match	CCDC50	ENST00000392456.4	1926	11	309	17378	309	4516	3prime_fragment	FALSE	canonical	1	731073	junction_1	28418.810815857512	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	282	791	30.0	-27	True	ATTAAA	-15
PB.8599.15	chr3	+	5262	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	330	-3666	330	-2829	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	261	1181	5.0	-6	True	NA	NA
PB.8599.12	chr3	+	1842	5	incomplete-splice_match	CCDC50	ENST00000392456.4	1926	11	305	21030	305	864	3prime_fragment	FALSE	canonical	1	731073	junction_1	28418.810815857512	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	286	795	10.0	-31	True	ATTAAA	-20
PB.8599.13	chr3	+	2768	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	306	-1148	306	1148	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	285	1205	25.0	-30	True	TATAAA	-21
PB.8599.10	chr3	+	3812	5	incomplete-splice_match	CCDC50	ENST00000392456.4	1926	11	265	19100	265	2794	3prime_fragment	FALSE	canonical	1	731073	junction_1	28418.810815857512	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	326	835	20.0	-71	True	NA	NA
PB.8599.11	chr3	+	5892	11	full-splice_match	CCDC50	ENST00000392456.4	1926	11	268	-4234	268	-2261	multi-exon	FALSE	canonical	1	540924	junction_5	164297.01424703372	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	323	1243	10.0	-68	True	AATAAA	-17
PB.12391.2	chrY	-	5726	27	novel_in_catalog	KDM5D	novel	5501	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	45128	junction_8	32287.34653907043	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	78	2744	35.0	-3	True	AATAAA	-26
PB.12391.3	chrY	-	5698	27	novel_not_in_catalog	KDM5D	novel	5501	12	NA	NA	-21	0	any annotated donor/acceptor	FALSE	canonical	1	17313	junction_2	37774.51692917129	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	82	2748	35.0	-7	True	AATAAA	-26
PB.12391.1	chrY	-	5848	26	novel_in_catalog	KDM5D	novel	5501	12	NA	NA	-17	0	intron_retention	FALSE	canonical	1	45128	junction_8	32460.753795215536	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	3141	5270	35.0	-3	True	AATAAA	-26
PB.12391.6	chrY	-	5274	27	full-splice_match	KDM5D	ENST00000317961.8	5472	27	195	3	-17	-1	multi-exon	FALSE	canonical	1	58668	junction_8	31054.46046287928	NA	1	NA	TRUE	NA	NA	NA	C	coding	1539	4620	78	4697	30.0	-3	True	AATAAA	-25
PB.12391.7	chrY	-	5391	26	novel_in_catalog	KDM5D	novel	5501	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	58668	junction_8	31165.680641526185	NA	0	NA	TRUE	NA	NA	NA	C	coding	880	2643	2172	4814	30.0	2	True	AATAAA	-25
PB.12391.4	chrY	-	5260	27	novel_not_in_catalog	KDM5D	novel	5501	12	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	9611	junction_8	36218.18194665091	NA	0	NA	TRUE	NA	NA	NA	C	coding	1462	4389	298	4686	35.0	-42	False	AATAAA	-22
PB.726.2	chr1	+	2903	15	full-splice_match	ADAMTSL4	ENST00000369041.9	2908	15	2	3	2	-3	multi-exon	FALSE	canonical	1	56168	junction_2	18130.197756049696	NA	5	NA	TRUE	NA	NA	NA	C	coding	877	2634	249	2882	20.0	2	True	NA	NA
PB.6678.2	chr2	+	2047	6	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	657	38079	-5	1092	3prime_fragment	FALSE	canonical	1	157152	junction_1	32245.782171316605	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1989	58	2046	60.0	-4	True	AAGAAA	-16
PB.8868.5	chr4	-	4678	10	full-splice_match	KLHL8	ENST00000273963.9	5621	10	-16	959	-16	-19	multi-exon	FALSE	canonical	1	59622	junction_7	37186.902072877456	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	359	2221	100.0	-7	True	NA	NA
PB.12391.9	chrY	-	5194	26	novel_not_in_catalog	KDM5D	novel	5501	12	NA	NA	-17	0	intron_retention	FALSE	canonical	1	9611	junction_7	36221.20368703393	NA	0	NA	TRUE	NA	NA	NA	C	coding	1295	3888	78	3965	35.0	-3	True	AATAAA	-23
PB.1066.4	chr1	-	3342	5	novel_not_in_catalog	SLC45A3	novel	2448	3	NA	NA	-7095	-2	any annotated donor/acceptor	FALSE	canonical	1	8484	junction_4	321852.61713205004	NA	2	NA	TRUE	NA	NA	NA	C	coding	553	1662	300	1961	10.0	1	True	ATTAAA	-17
PB.6678.3	chr2	+	1416	6	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	643	38724	13	447	3prime_fragment	FALSE	canonical	1	157152	junction_1	32245.782171316605	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1344	72	1415	70.0	-18	True	AAAAAG	-40
PB.7101.1	chr2	-	3003	5	full-splice_match	ANKMY1	ENST00000405002.5	3304	5	300	1	-15	0	multi-exon	FALSE	canonical	1	27677	junction_4	28934.59096285102	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	183	1061	15.0	-14	True	NA	NA
PB.985.7	chr1	+	3523	18	full-splice_match	RGL1	ENST00000360851.3	4724	18	1	1200	1	-1200	multi-exon	FALSE	canonical	1	88831	junction_2	21613.225221231278	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2307	178	2484	30.0	1	True	NA	NA
PB.6757.10	chr2	+	2105	8	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	-12	-7184	intron_retention	FALSE	canonical	1	592836	junction_2	175739.19111151787	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	999	1634	100.0	-12	True	NA	NA
PB.6757.11	chr2	+	4059	11	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	0	-186	intron_retention	FALSE	canonical	1	6250	junction_8	298368.3525736099	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	987	1637	70.0	0	True	NA	NA
PB.6757.12	chr2	+	2251	12	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	0	-2097	intron_retention	FALSE	canonical	1	592836	junction_2	162575.92006884477	NA	38	2	TRUE	NA	NA	NA	C	coding	397	1194	987	2180	25.0	0	True	ACTAAA	-13
PB.6757.13	chr2	+	4259	11	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	1	6	intron_retention	FALSE	canonical	1	19172	junction_4	279681.63041538856	NA	3	NA	TRUE	NA	NA	NA	C	coding	274	825	1261	2085	10.0	1	True	NA	NA
PB.6757.14	chr2	+	3844	14	novel_in_catalog	UBXN4	novel	4006	13	NA	NA	27	6	combination_of_known_junctions	FALSE	canonical	1	2069	junction_1	335086.33787202544	NA	2	NA	TRUE	NA	NA	NA	C	coding	544	1635	36	1670	10.0	-25	False	NA	NA
PB.6757.15	chr2	+	3622	12	incomplete-splice_match	UBXN4	ENST00000272638.13	4006	13	6645	-6	153	6	5prime_fragment	FALSE	canonical	1	592836	junction_1	150847.02875298308	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	27	1448	10.0	6344	False	NA	NA
PB.8893.3	chr4	+	2995	11	novel_not_in_catalog	DAPP1	novel	2955	10	NA	NA	-5	-6	any annotated donor/acceptor	FALSE	canonical	1	4230	junction_10	88180.13654383848	NA	5	NA	TRUE	NA	NA	NA	C	coding	258	777	87	863	35.0	-22	True	ATTAAA	-27
PB.8893.2	chr4	+	2891	9	full-splice_match	DAPP1	ENST00000512369.1	1440	9	-18	-1433	-5	-7	multi-exon	FALSE	canonical	1	141384	junction_1	21456.081036328604	NA	2	NA	TRUE	NA	NA	NA	C	coding	280	843	87	929	35.0	-22	True	ATTAAA	-26
PB.8893.1	chr4	+	2357	9	full-splice_match	DAPP1	ENST00000512369.1	1440	9	-20	-897	-7	-3	multi-exon	FALSE	canonical	1	141384	junction_1	21456.081036328604	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	89	931	20.0	-24	True	GATAAA	-16
PB.10696.4	chr7	+	1840	10	full-splice_match	ARPC1A	ENST00000262942.9	1565	10	-5	-270	-5	265	multi-exon	FALSE	canonical	1	170037	junction_5	289822.1449947502	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	130	1242	50.0	-5	True	NA	NA
PB.99.4	chr1	+	2900	19	novel_not_in_catalog	PLOD1	novel	991	9	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	1	3931	junction_8	373856.2665908146	NA	3	1	TRUE	NA	NA	NA	C	coding	702	2109	64	2172	35.0	-8	True	ATTAAA	-14
PB.6830.5	chr2	+	5442	14	novel_in_catalog	DCAF17	novel	2429	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	11	junction_4	36022.69635798254	NA	1	1	TRUE	NA	NA	NA	C	coding	240	723	783	1505	20.0	-13	True	NA	NA
PB.3140.3	chr13	-	2925	2	novel_in_catalog	TSC22D1	novel	3135	3	NA	NA	-13	-7	combination_of_known_junctions	FALSE	canonical	1	2922424	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-16
PB.674.6	chr1	+	2739	15	novel_in_catalog	POLR3C	novel	1186	10	NA	NA	5	-302	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	448	1623	30.0	-38	True	NA	NA
PB.5088.4	chr17	+	2527	2	novel_not_in_catalog	ATP5MC1	novel	598	5	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	8	1	TRUE	NA	NA	NA	C	coding	128	387	1987	2373	15.0	-14	True	ATTAAA	-15
PB.10216.6	chr6	-	2606	9	novel_in_catalog	MOXD1	novel	3059	12	NA	NA	-22	-6	no_combination_of_known_junctions	FALSE	canonical	1	287	junction_8	86672.25094492109	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	72	1514	20.0	-23	True	AATAAA	-10
PB.10216.7	chr6	-	2878	12	full-splice_match	MOXD1	ENST00000367963.7	3059	12	61	120	-9	-106	multi-exon	FALSE	canonical	1	138701	junction_11	47108.37429387232	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	59	1900	25.0	-10	True	AATAAA	-24
PB.10216.4	chr6	-	2882	12	novel_not_in_catalog	MOXD1	novel	3059	12	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	2185	junction_11	78307.10356608199	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	50	1786	15.0	-1	True	AATAAA	-14
PB.10216.5	chr6	-	2955	12	novel_not_in_catalog	MOXD1	novel	3059	12	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	1385	junction_7	82073.06882294903	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	50	1861	15.0	-1	True	AATAAA	-12
PB.10216.2	chr6	-	2988	12	full-splice_match	MOXD1	ENST00000367963.7	3059	12	70	1	0	-1	multi-exon	FALSE	canonical	1	138701	junction_11	47108.37429387232	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	50	1891	15.0	-1	True	AATAAA	-15
PB.3140.1	chr13	-	3077	3	full-splice_match	TSC22D1	ENST00000261489.6	3135	3	-3	61	-3	-61	multi-exon	FALSE	canonical	1	2922424	junction_2	110420.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	251	655	35.0	9	True	ATTAAA	-16
PB.10216.1	chr6	-	3210	12	full-splice_match	MOXD1	ENST00000367963.7	3059	12	22	-173	22	173	multi-exon	FALSE	canonical	1	138701	junction_11	47108.37429387232	NA	3	NA	TRUE	NA	NA	NA	C	coding	613	1842	98	1939	15.0	-49	True	AATAAA	-14
PB.6199.9	chr19	+	4105	6	novel_in_catalog	TPM3P9	novel	2920	2	NA	NA	0	13590	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	80388.67259856951	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	461	2593	20.0	0	True	NA	NA
PB.10216.8	chr6	-	2313	12	full-splice_match	MOXD1	ENST00000367963.7	3059	12	64	682	-6	-668	multi-exon	FALSE	canonical	1	138701	junction_11	47108.37429387232	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	56	1897	5.0	-7	True	TATAAA	-20
PB.10216.9	chr6	-	2176	12	full-splice_match	MOXD1	ENST00000367963.7	3059	12	36	847	-34	-833	multi-exon	FALSE	canonical	1	138701	junction_11	47108.37429387232	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	84	1925	35.0	-35	True	AATAAA	-33
PB.12385.9	chrY	+	5150	14	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-3	0	intron_retention	FALSE	canonical	1	161517	junction_11	69516.89886400744	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	92	868	10.0	13	True	AATAAA	-14
PB.12385.8	chrY	+	4524	16	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	114102	junction_9	71961.27216002291	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	738	2168	10.0	-1	True	AATAAA	-14
PB.9440.1	chr5	+	2975	19	novel_not_in_catalog	AC116366.3	novel	7893	27	NA	NA	107227	-36746	any annotated donor/acceptor	TRUE	canonical	1	752	junction_1	122363.92831565805	NA	0	NA	TRUE	NA	NA	NA	B	coding	892	2676	300	2975	75.0	-389	False	AATAAA	-28
PB.12385.1	chrY	+	4387	17	novel_not_in_catalog	DDX3Y	novel	2709	18	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	24480	junction_14	87020.59587208992	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1914	118	2031	10.0	-13	True	AATAAA	-14
PB.12385.3	chrY	+	4702	15	novel_not_in_catalog	DDX3Y	novel	2709	18	NA	NA	-8	0	intron_retention	FALSE	canonical	1	24480	junction_12	92240.48834642928	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	1414	2346	10.0	-10	True	AATAAA	-14
PB.12385.2	chrY	+	2504	17	full-splice_match	DDX3Y	ENST00000336079.7	4445	17	1	1940	1	-1	multi-exon	FALSE	canonical	1	114102	junction_10	72203.45226932972	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	106	2088	30.0	-1	True	AATAAA	-26
PB.12385.5	chrY	+	2244	17	full-splice_match	DDX3Y	ENST00000336079.7	4445	17	-8	2209	-8	-270	multi-exon	FALSE	canonical	1	114102	junction_10	72203.45226932972	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	115	2097	70.0	-10	True	NA	NA
PB.12385.4	chrY	+	4354	16	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	6943	junction_8	93432.42316041401	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	115	1998	10.0	-10	True	AATAAA	-14
PB.12385.7	chrY	+	4763	15	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	114102	junction_8	75607.19539309194	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	1406	2407	10.0	-2	True	AATAAA	-14
PB.12385.6	chrY	+	4387	17	novel_not_in_catalog	DDX3Y	novel	2709	18	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	canonical	1	275	junction_9	91748.2671336486	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	113	2032	10.0	-8	True	AATAAA	-13
PB.7593.1	chr22	-	3781	10	full-splice_match	ADA2	ENST00000399837.7	3841	10	58	2	58	-1	multi-exon	FALSE	canonical	1	50142	junction_9	74553.66584341347	NA	0	NA	TRUE	NA	NA	NA	A	coding	511	1536	68	1603	10.0	57	True	NA	NA
PB.4590.1	chr16	-	1903	4	full-splice_match	EMC8	ENST00000435200.2	1935	4	29	3	29	-3	multi-exon	FALSE	canonical	1	93417	junction_1	179564.14150009648	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	285	665	15.0	598	False	AATAAA	-21
PB.10758.10	chr7	+	2082	5	full-splice_match	ARMC10	ENST00000454559.5	2347	5	268	-3	-19	3	multi-exon	FALSE	canonical	1	12980	junction_1	325421.7719332674	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	125	874	35.0	-19	True	AATAAA	-17
PB.4590.3	chr16	-	1271	5	full-splice_match	EMC8	ENST00000253457.7	1962	5	-85	776	-17	-2	multi-exon	FALSE	canonical	1	402079	junction_4	118007.91078673497	NA	4	NA	TRUE	NA	NA	NA	C	coding	210	633	331	963	40.0	552	False	ATTAAA	-17
PB.4590.2	chr16	-	1957	5	full-splice_match	EMC8	ENST00000253457.7	1962	5	1	4	1	-4	multi-exon	FALSE	canonical	1	402079	junction_4	118007.91078673497	NA	1	NA	TRUE	NA	NA	NA	C	coding	210	633	245	877	15.0	4	True	AATAAA	-20
PB.1387.1	chr10	-	2360	1	full-splice_match	AL353801.3	ENST00000609898.1	542	1	-120	-1698	-120	1698	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	9574	False	NA	NA
PB.8983.2	chr4	+	3409	9	full-splice_match	JADE1	ENST00000511647.5	3560	9	-13	164	-13	-164	multi-exon	FALSE	canonical	1	66321	junction_1	69533.69596091074	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	215	1744	30.0	-10	True	AATAAA	-8
PB.4580.8	chr16	-	2222	6	full-splice_match	HSDL1	ENST00000219439.8	3519	6	4	1293	4	549	multi-exon	FALSE	canonical	1	157941	junction_5	30038.75930593672	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	174	1166	15.0	27	False	AATATA	-12
PB.4580.9	chr16	-	1846	6	full-splice_match	HSDL1	ENST00000219439.8	3519	6	9	1664	-4	178	multi-exon	FALSE	canonical	1	157941	junction_5	30038.75930593672	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	169	1161	45.0	-24	True	ATTAAA	-27
PB.4580.6	chr16	-	3061	6	full-splice_match	HSDL1	ENST00000219439.8	3519	6	24	434	5	-37	multi-exon	FALSE	canonical	1	157941	junction_5	30038.75930593672	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	154	1146	35.0	-9	True	ATTAAA	-18
PB.4580.7	chr16	-	2349	6	full-splice_match	HSDL1	ENST00000219439.8	3519	6	32	1138	0	704	multi-exon	FALSE	canonical	1	157941	junction_5	30038.75930593672	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	146	1138	30.0	-1	True	TATAAA	-22
PB.4580.4	chr16	-	3435	5	novel_in_catalog	HSDL1	novel	3519	6	NA	NA	1	-2	intron_retention	TRUE	canonical	1	719	junction_4	94494.18398372462	NA	5	1	TRUE	NA	NA	NA	C	coding	330	993	96	1088	25.0	-13	True	AATAAA	-23
PB.4580.5	chr16	-	3372	7	novel_in_catalog	HSDL1	novel	3519	6	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	15864	junction_1	72046.02333848058	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	167	1159	25.0	-22	True	AATAAA	-23
PB.4580.2	chr16	-	4153	5	novel_in_catalog	HSDL1	novel	3519	6	NA	NA	2	-2	intron_retention	FALSE	canonical	1	157941	junction_4	31123.946491206734	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	1387	1806	25.0	1	True	AATAAA	-23
PB.4580.3	chr16	-	3409	6	full-splice_match	HSDL1	ENST00000219439.8	3519	6	14	96	1	-96	multi-exon	FALSE	canonical	1	157941	junction_5	30038.75930593672	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	164	1156	75.0	-19	True	NA	NA
PB.4580.1	chr16	-	3641	6	full-splice_match	HSDL1	ENST00000219439.8	3519	6	25	-147	6	12	multi-exon	FALSE	canonical	1	157941	junction_5	30038.75930593672	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	153	1145	20.0	-8	True	ATTAAA	-30
PB.11733.1	chr9	-	4270	28	full-splice_match	FKBP15	ENST00000238256.7	4336	28	66	0	-16	0	multi-exon	FALSE	canonical	1	163856	junction_24	70484.07480492047	NA	3	NA	TRUE	NA	NA	NA	C	coding	1219	3660	53	3712	40.0	0	True	AATAAA	-30
PB.9618.6	chr5	-	4078	19	novel_not_in_catalog	STK10	novel	6060	19	NA	NA	115	-507	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	118473.97669040872	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	232	2814	25.0	134	False	AATAAA	-20
PB.6290.2	chr2	-	1635	4	full-splice_match	ADI1	ENST00000327435.10	2391	4	196	560	196	532	multi-exon	FALSE	canonical	1	575355	junction_3	448674.66125195386	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	54	593	25.0	-10	True	ATTAAA	-18
PB.9618.8	chr5	-	4269	20	novel_not_in_catalog	STK10	novel	6060	19	NA	NA	141	-508	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	115432.02047814804	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	100	3006	25.0	-50	True	AATAAA	-19
PB.12033.15	chrX	+	4618	18	novel_in_catalog	DDX3X	novel	6907	17	NA	NA	-21	0	no_combination_of_known_junctions	FALSE	canonical	1	567	junction_1	667816.4095546083	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	182	2128	10.0	-4831	False	AATAAA	-19
PB.12033.14	chrX	+	4587	17	novel_in_catalog	DDX3X	novel	6907	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2316	junction_1	623830.44696205	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	670	2097	10.0	-5319	False	AATAAA	-19
PB.12033.16	chrX	+	4248	14	full-splice_match	DDX3X	ENST00000642424.1	5789	14	1555	-14	59	0	multi-exon	FALSE	canonical	1	872460	junction_2	467060.58744332026	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	328	1758	10.0	-8353	False	AATAAA	-19
PB.12033.11	chrX	+	2235	17	full-splice_match	DDX3X	ENST00000644876.1	6907	17	878	3794	0	92	multi-exon	FALSE	canonical	1	872460	junction_5	450348.98433227243	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	92	2080	65.0	0	True	NA	NA
PB.12033.10	chrX	+	2493	17	full-splice_match	DDX3X	ENST00000644876.1	6907	17	878	3536	0	-6	multi-exon	FALSE	canonical	1	872460	junction_5	450348.98433227243	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	92	2080	35.0	0	True	AATAAA	-21
PB.12033.13	chrX	+	4790	18	novel_in_catalog	DDX3X	novel	6907	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	2316	junction_1	729550.6023372826	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	429	2300	10.0	-5340	False	AATAAA	-19
PB.12033.12	chrX	+	4471	17	full-splice_match	DDX3X	ENST00000646319.1	4554	17	84	-1	2	1	multi-exon	FALSE	canonical	1	542859	junction_15	506261.91591828235	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	553	1980	10.0	-5674	False	AATAAA	-20
PB.5632.1	chr19	-	2689	2	full-splice_match	TICAM1	ENST00000248244.5	2676	2	-8	-5	-8	5	multi-exon	FALSE	canonical	1	78706	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	239	2377	15.0	-1	True	AATAAA	-21
PB.9035.5	chr4	-	2055	15	full-splice_match	PLRG1	ENST00000499023.6	3351	15	39	1257	0	169	multi-exon	FALSE	canonical	1	537600	junction_8	126245.99088993127	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	89	1633	25.0	-1	True	ATTAAA	-15
PB.9035.6	chr4	-	1943	15	full-splice_match	PLRG1	ENST00000499023.6	3351	15	35	1373	0	53	multi-exon	FALSE	canonical	1	537600	junction_8	126245.99088993127	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	93	1637	60.0	-5	True	NA	NA
PB.5632.2	chr19	-	2076	1	incomplete-splice_match	TICAM1	ENST00000248244.5	2676	2	13696	1	-38	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	498	1497	274	1770	10.0	-410	False	AATAAA	-15
PB.10955.3	chr7	-	3913	28	full-splice_match	NCAPG2	ENST00000356309.7	3930	28	20	-3	-5	1	multi-exon	FALSE	canonical	1	90632	junction_27	98278.83607155838	NA	0	NA	TRUE	NA	NA	NA	C	coding	1143	3432	126	3557	30.0	-7	True	AATAAA	-16
PB.9035.1	chr4	-	4312	13	novel_in_catalog	PLRG1	novel	3351	15	NA	NA	14	-21	intron_retention	FALSE	canonical	1	537600	junction_8	131670.9483367904	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	1593	2654	75.0	-26	True	NA	NA
PB.9115.4	chr5	+	6641	10	novel_in_catalog	PDCD6	novel	458	5	NA	NA	13522	84432	intron_retention	FALSE	canonical	1	43291	junction_1	18159.28761451469	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	1805	3187	25.0	-25	True	AATACA	-32
PB.8986.1	chr4	-	5936	4	full-splice_match	PCDH18	ENST00000412923.6	5102	4	-52	-782	-17	-3	multi-exon	FALSE	canonical	1	140339	junction_3	26014.676900208124	NA	1	NA	TRUE	NA	NA	NA	C	coding	1131	3396	433	3828	30.0	-53	True	AATAAA	-27
PB.9035.8	chr4	-	2828	13	novel_in_catalog	PLRG1	novel	3351	15	NA	NA	14	10	intron_retention	FALSE	canonical	1	537600	junction_8	131670.9483367904	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	1593	2654	10.0	-26	True	AATAAA	-17
PB.9035.9	chr4	-	1811	15	full-splice_match	PLRG1	ENST00000499023.6	3351	15	35	1505	0	10	multi-exon	FALSE	canonical	1	537600	junction_8	126245.99088993127	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	93	1637	10.0	-5	True	AATAAA	-17
PB.9850.4	chr6	+	1313	6	novel_in_catalog	MRPS18B	novel	1532	7	NA	NA	-3	-4	no_combination_of_known_junctions	FALSE	canonical	1	63679	junction_4	460405.52973004134	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	10	375	5.0	17	True	AATAAA	-18
PB.9646.6	chr5	+	2191	16	novel_not_in_catalog	GRK6	novel	557	4	NA	NA	30	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	228191.09472921057	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	988	1962	35.0	-25	True	GGGGCT	-29
PB.9758.5	chr6	+	1941	1	genic	MYLIP	novel	NA	NA	NA	NA	-39	-15855	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.9850.3	chr6	+	1384	7	full-splice_match	MRPS18B	ENST00000259873.4	1532	7	143	5	0	-5	multi-exon	FALSE	canonical	1	948110	junction_1	132507.49579143312	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	15	791	0.0	12	True	AATAAA	-17
PB.6653.1	chr2	+	3315	21	incomplete-splice_match	EIF5B	ENST00000289371.10	5777	24	107	6477	89	4159	3prime_fragment	FALSE	canonical	1	606372	junction_12	151411.01608135222	NA	10	1	TRUE	NA	NA	NA	C	coding	1073	3219	96	3314	65.0	-9158	False	AATATA	-4
PB.121.3	chr1	-	3972	3	novel_not_in_catalog	NBPF1	novel	5932	29	NA	NA	14	-233	any annotated donor/acceptor	FALSE	canonical	1	23423	junction_1	80496.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	15	True	NA	NA
PB.121.4	chr1	-	3626	2	incomplete-splice_match	NBPF1	ENST00000599069.5	2752	3	-25	5815	-25	2	3prime_fragment	FALSE	canonical	1	184415	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-24	True	NA	NA
PB.7583.1	chr22	+	4186	4	intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.11441.6	chr9	+	4230	1	genic	PDCD1LG2	novel	NA	NA	NA	NA	-31	-56486	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	8	True	NA	NA
PB.11441.5	chr9	+	4279	3	incomplete-splice_match	PDCD1LG2	ENST00000397747.4	2365	7	-33	32567	-33	-32567	3prime_fragment	FALSE	canonical	1	62650	junction_2	492.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	282	800	95.0	6	True	NA	NA
PB.6006.11	chr19	+	2370	17	incomplete-splice_match	SHKBP1	ENST00000291842.9	2363	18	237	1	6	0	5prime_fragment	FALSE	canonical	1	518059	junction_14	144286.4005071597	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	547	2181	20.0	-9778	False	AATAAA	-14
PB.6006.10	chr19	+	2250	19	novel_not_in_catalog	SHKBP1	novel	2363	18	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	213566.9385844479	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	14	2137	25.0	-1	True	AATAAA	-13
PB.11599.1	chr9	+	5205	2	antisense	novelGene_TRPM3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9907	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	coding	108	327	805	1131	10.0	-158	False	NA	NA
PB.3384.2	chr14	+	2890	6	full-splice_match	FAM177A1	ENST00000382406.7	858	6	-33	-1999	-33	3	multi-exon	FALSE	canonical	1	34488	junction_1	221880.56038454565	NA	2	1	TRUE	NA	NA	NA	C	coding	213	642	91	732	15.0	-21	True	TATAAA	-25
PB.11441.4	chr9	+	2418	7	full-splice_match	PDCD1LG2	ENST00000397747.4	2365	7	-55	2	-55	-2	multi-exon	FALSE	canonical	1	44578	junction_6	6950.281443142349	NA	1	NA	TRUE	NA	NA	NA	C	coding	273	822	304	1125	30.0	-16	True	AATAAA	-19
PB.10999.5	chr8	+	6728	40	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	4	4	any annotated donor/acceptor	TRUE	canonical	1	48055	junction_30	241916.3791644966	NA	3	1	TRUE	NA	NA	NA	C	coding	2067	6204	436	6639	35.0	1	True	AATAAA	-19
PB.11664.10	chr9	-	2709	4	incomplete-splice_match	FANCC	ENST00000474949.1	841	7	-37	67468	-37	-3912	3prime_fragment	FALSE	canonical	1	58532	junction_1	10263.374916014063	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	300	656	90.0	-38	False	NA	NA
PB.6874.8	chr2	+	3118	7	novel_in_catalog	TTN-AS1	novel	945	4	NA	NA	0	410	intron_retention	FALSE	canonical	1	4240	junction_6	28688.34111427304	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	812	1195	30.0	2	True	AGTAAA	-18
PB.8748.4	chr4	-	6813	33	novel_not_in_catalog	PDS5A	novel	7176	33	NA	NA	133	-1	any annotated donor/acceptor	FALSE	canonical	1	2220	junction_32	137863.48117847403	NA	1	NA	TRUE	NA	NA	NA	C	coding	1337	4014	179	4192	25.0	586	False	AATAAA	-19
PB.3485.2	chr14	-	2242	2	novel_not_in_catalog	HIF1A-AS2	novel	533	3	NA	NA	9	-3007	any annotated donor/acceptor	FALSE	canonical	1	14618	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	9	True	AATAAA	-19
PB.3485.1	chr14	-	4173	2	novel_not_in_catalog	HIF1A-AS2	novel	533	3	NA	NA	27	-1058	any annotated donor/acceptor	FALSE	canonical	1	14618	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	27	True	CATAAA	-28
PB.1072.1	chr1	-	2235	4	full-splice_match	FAM72A	ENST00000367128.7	2398	4	6	157	6	-80	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	A	coding	149	450	843	1292	25.0	NA	False	AATAAA	-13
PB.11603.1	chr9	+	5195	14	full-splice_match	GDA	ENST00000358399.7	5340	14	145	0	137	0	multi-exon	TRUE	canonical	1	74021	junction_1	15271.107909029743	NA	0	NA	TRUE	NA	NA	NA	A	coding	429	1290	24	1313	5.0	79	False	AATAAA	-22
PB.8748.3	chr4	-	6879	33	full-splice_match	PDS5A	ENST00000303538.12	7176	33	297	0	-149	0	multi-exon	TRUE	canonical	1	258091	junction_32	113740.69254359617	NA	0	NA	TRUE	NA	NA	NA	C	coding	1337	4014	244	4257	20.0	-2	True	AATAAA	-20
PB.9776.1	chr6	+	2316	2	antisense	novelGene_AL512380.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	B	coding	115	348	786	1133	90.0	-1	True	NA	NA
PB.9776.2	chr6	+	2214	2	antisense	novelGene_AL512380.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	B	coding	235	708	786	1493	90.0	-1	True	NA	NA
PB.146.2	chr1	-	6100	34	novel_in_catalog	EIF4G3	novel	5567	33	NA	NA	-7	0	no_combination_of_known_junctions	FALSE	canonical	1	4624	junction_33	126062.51870912804	NA	2	1	TRUE	NA	NA	NA	B	coding	1585	4758	507	5264	55.0	1	True	AATAAA	-19
PB.8748.9	chr4	-	5404	33	full-splice_match	PDS5A	ENST00000303538.12	7176	33	316	1456	-130	-1456	multi-exon	FALSE	canonical	1	258091	junction_32	113740.69254359617	NA	8	2	TRUE	NA	NA	NA	C	coding	1337	4014	225	4238	20.0	323	False	AATAAA	-14
PB.11626.2	chr9	+	1794	11	incomplete-splice_match	NTRK2	ENST00000359847.3	6646	12	31364	4686	31364	-4686	5prime_fragment	FALSE	canonical	1	182703	junction_2	34361.339023530505	NA	0	NA	TRUE	NA	NA	NA	B	coding	321	966	392	1357	35.0	1	True	ATTAAA	-21
PB.967.4	chr1	+	2740	13	novel_not_in_catalog	QSOX1	novel	9311	12	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	10713	junction_12	415693.4128813833	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	40	2049	20.0	0	True	AATAAA	-17
PB.379.1	chr1	-	3648	13	full-splice_match	GPBP1L1	ENST00000355105.7	3736	13	88	0	-6	0	multi-exon	FALSE	canonical	1	280510	junction_12	190119.26785288402	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1274	2698	15.0	-16	True	AATAAA	-25
PB.12170.2	chrX	+	4070	9	full-splice_match	ZNF711	ENST00000373165.7	4124	9	50	4	-2	-4	multi-exon	FALSE	canonical	1	20776	junction_2	53168.01306177898	NA	2	NA	TRUE	NA	NA	NA	C	coding	761	2286	257	2542	30.0	-5	True	AATAAA	-14
PB.899.2	chr1	+	4450	6	novel_in_catalog	UCK2	novel	1375	7	NA	NA	17	0	no_combination_of_known_junctions	FALSE	canonical	1	8522	junction_3	318997.94902575784	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	13	405	5.0	-2	True	AATAAA	-16
PB.9526.14	chr5	-	4824	27	novel_not_in_catalog	DIAPH1	novel	2606	2	NA	NA	0	46	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	351986.5627911667	NA	2	1	TRUE	NA	NA	NA	B	coding	873	2622	86	2707	65.0	-1	True	NA	NA
PB.9526.17	chr5	-	2606	17	novel_not_in_catalog	DIAPH1	novel	5795	28	NA	NA	-26	-5592	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	257074.97175817183	NA	1	1	TRUE	NA	NA	NA	B	coding	831	2493	112	2604	75.0	-1	True	AAGAAA	-13
PB.9526.16	chr5	-	2620	18	novel_not_in_catalog	DIAPH1	novel	5795	28	NA	NA	-13	-5592	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	282632.93616154173	NA	1	1	TRUE	NA	NA	NA	B	coding	840	2520	99	2618	75.0	177	False	AAGAAA	-13
PB.9526.13	chr5	-	4805	26	novel_not_in_catalog	DIAPH1	novel	2606	2	NA	NA	-8	46	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	336545.09557918087	NA	1	1	TRUE	NA	NA	NA	B	coding	864	2595	94	2688	65.0	-9	True	NA	NA
PB.10077.6	chr6	+	2183	10	novel_not_in_catalog	BCKDHB	novel	743	6	NA	NA	24	3135	any annotated donor/acceptor	FALSE	canonical	1	3134	junction_9	76598.01524408667	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	24	1103	40.0	0	True	ATTAAA	-16
PB.6880.11	chr2	+	4471	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	144	-426	-35	426	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	347	3385	40.0	-17	True	CATAAA	-18
PB.6743.1	chr2	+	3781	7	novel_in_catalog	PLEKHB2	novel	2277	8	NA	NA	-23	-4	no_combination_of_known_junctions	FALSE	canonical	1	6392	junction_5	316842.41046005645	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	129	707	10.0	-5057	False	ATTAAA	-20
PB.9794.1	chr6	+	2710	2	full-splice_match	HIST1H3E	ENST00000634733.1	2679	2	-33	2	-33	-2	multi-exon	FALSE	canonical	1	46291	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	394	804	35.0	-969	False	AATAAA	-15
PB.9794.2	chr6	+	2565	3	novel_not_in_catalog	HIST1H3E	novel	2679	2	NA	NA	-26	3	any annotated donor/acceptor	FALSE	canonical	1	18969	junction_2	13661.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	387	797	30.0	-5	True	AATAAA	-20
PB.11891.3	chr9	+	5404	10	novel_not_in_catalog	RXRA	novel	5215	3	NA	NA	5467	1	any annotated donor/acceptor	FALSE	canonical	1	23904	junction_1	173566.34826806467	NA	1	NA	TRUE	NA	NA	NA	B	coding	435	1308	125	1432	5.0	-4	True	AATACA	-19
PB.8529.1	chr3	-	3006	9	novel_not_in_catalog	ZMAT3	novel	9406	6	NA	NA	-242	57388	any annotated donor/acceptor	FALSE	canonical	1	489	junction_3	70598.42272748999	NA	3	1	TRUE	NA	NA	NA	C	coding	313	942	272	1213	65.0	-4	True	NA	NA
PB.6743.3	chr2	+	1822	8	full-splice_match	PLEKHB2	ENST00000409158.5	2277	8	455	0	0	0	multi-exon	FALSE	canonical	1	90657	junction_6	269185.7068959294	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	106	798	80.0	-4	True	NA	NA
PB.5276.5	chr17	+	2289	14	novel_not_in_catalog	AC005837.2	novel	479	2	NA	NA	3658	40202	any annotated donor/acceptor	FALSE	canonical	1	6698	junction_4	76176.40572183898	NA	0	NA	TRUE	NA	NA	NA	B	coding	362	1089	829	1917	25.0	2	True	TATAAA	-13
PB.5276.4	chr17	+	2354	14	novel_in_catalog	AC005837.2	novel	479	2	NA	NA	3645	40202	no_combination_of_known_junctions	FALSE	canonical	1	7770	junction_4	86419.78505887005	NA	2	NA	TRUE	NA	NA	NA	B	coding	211	636	1347	1982	25.0	-11	True	TATAAA	-13
PB.5276.7	chr17	+	1962	14	full-splice_match	MFSD11	ENST00000590514.5	1891	14	-74	3	-74	-3	multi-exon	FALSE	canonical	1	51334	junction_1	56911.07078436045	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	241	1590	25.0	-37	True	TATAAA	-13
PB.5276.6	chr17	+	2582	14	novel_not_in_catalog	AC005837.2	novel	479	2	NA	NA	4682	40732	any annotated donor/acceptor	FALSE	canonical	1	4037	junction_1	66403.16296621088	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1350	331	1680	100.0	-459	False	NA	NA
PB.5276.1	chr17	+	2323	14	full-splice_match	MFSD11	ENST00000621483.4	2850	14	-3	530	-3	-3	multi-exon	TRUE	canonical	1	17267	junction_1	63639.296774312286	NA	1	1	TRUE	NA	NA	NA	C	coding	449	1350	602	1951	25.0	0	True	TATAAA	-13
PB.5276.3	chr17	+	2880	14	novel_not_in_catalog	AC005837.2	novel	479	2	NA	NA	3601	40732	any annotated donor/acceptor	FALSE	canonical	1	377	junction_1	78839.30358046839	NA	5	1	TRUE	NA	NA	NA	B	coding	362	1089	890	1978	100.0	17	True	NA	NA
PB.5276.2	chr17	+	2833	14	novel_not_in_catalog	AC005837.2	novel	479	2	NA	NA	3599	40732	any annotated donor/acceptor	FALSE	canonical	1	15395	junction_1	64025.831155555985	NA	0	NA	TRUE	NA	NA	NA	B	coding	449	1350	582	1931	100.0	15	True	NA	NA
PB.1002.2	chr1	+	2886	18	novel_not_in_catalog	PLA2G4A	novel	2875	18	NA	NA	-4	-8	any annotated donor/acceptor	FALSE	canonical	1	4977	junction_1	46866.87518801817	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	172	2421	60.0	-41	True	NA	NA
PB.5276.9	chr17	+	2074	13	full-splice_match	MFSD11	ENST00000588460.5	3612	13	1690	-152	-70	-3	multi-exon	FALSE	canonical	1	143482	junction_8	41996.27002708098	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	353	1702	25.0	-33	True	TATAAA	-13
PB.5276.8	chr17	+	2489	14	full-splice_match	MFSD11	ENST00000590514.5	1891	14	-71	-527	-71	0	multi-exon	FALSE	canonical	1	51334	junction_1	56911.07078436045	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	238	1587	100.0	-34	True	NA	NA
PB.6743.4	chr2	+	3707	6	full-splice_match	PLEKHB2	ENST00000439822.6	4177	6	460	10	5	-10	multi-exon	FALSE	canonical	1	9567	junction_4	345959.76469028875	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	101	616	20.0	1	True	ATTAAA	-14
PB.9998.1	chr6	+	4114	20	full-splice_match	PTK7	ENST00000230419.8	4272	20	152	6	51	0	multi-exon	TRUE	canonical	1	213484	junction_1	102438.75884225302	NA	1	NA	TRUE	NA	NA	NA	A	coding	1070	3213	70	3282	25.0	0	True	AATAAA	-15
PB.11932.25	chr9	+	3024	4	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-19	14	no_combination_of_known_junctions	FALSE	canonical	1	3101	junction_3	171999.76894364326	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	225	605	5.0	-4427	False	NA	NA
PB.1002.1	chr1	+	3801	18	full-splice_match	PLA2G4A	ENST00000367466.3	2875	18	-4	-922	-4	922	multi-exon	FALSE	canonical	1	35465	junction_3	35348.41797480899	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	157	2406	20.0	-41	True	AATAAA	-20
PB.3491.1	chr14	-	3323	3	full-splice_match	SGPP1	ENST00000247225.6	3312	3	-16	5	-16	-5	multi-exon	FALSE	canonical	1	173714	junction_2	13658.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	112	1437	25.0	-1	True	AATAAA	-17
PB.3491.2	chr14	-	3447	4	novel_not_in_catalog	SGPP1	novel	3312	3	NA	NA	-23	-6	any annotated donor/acceptor	FALSE	canonical	1	3660	junction_2	92472.29613601399	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	119	982	25.0	-8	True	AATAAA	-16
PB.3491.3	chr14	-	2748	2	novel_not_in_catalog	SGPP1	novel	3312	3	NA	NA	-57	-23339	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	282	849	153	1001	90.0	171	False	NA	NA
PB.4647.25	chr17	-	2745	12	full-splice_match	INPP5K	ENST00000421807.6	2988	12	236	7	1	-7	multi-exon	FALSE	canonical	1	213837	junction_11	69271.03464956682	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	154	1500	20.0	8	True	NA	NA
PB.4647.24	chr17	-	2993	13	full-splice_match	INPP5K	ENST00000320345.10	2880	13	69	-182	-5	-4	multi-exon	FALSE	canonical	1	14183	junction_11	129160.27955291634	NA	2	1	TRUE	NA	NA	NA	C	coding	372	1119	627	1745	15.0	-6	True	NA	NA
PB.4647.27	chr17	-	1955	13	full-splice_match	INPP5K	ENST00000320345.10	2880	13	75	850	1	-40	multi-exon	FALSE	canonical	1	14183	junction_11	129160.27955291634	NA	1	1	TRUE	NA	NA	NA	C	coding	372	1119	621	1739	35.0	0	True	AATACA	-17
PB.4647.26	chr17	-	3707	11	novel_in_catalog	INPP5K	novel	2988	12	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	213837	junction_10	68078.23986884503	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	1692	2462	20.0	-3	True	NA	NA
PB.4647.21	chr17	-	3551	32	full-splice_match	MYO1C	ENST00000648446.1	4724	32	-6	1179	-6	48	multi-exon	FALSE	canonical	1	200692	junction_31	228526.59386818137	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	56	3190	15.0	-7	True	AAAAAG	-20
PB.4647.20	chr17	-	3970	32	full-splice_match	MYO1C	ENST00000648446.1	4724	32	-46	800	-46	31	multi-exon	FALSE	canonical	1	200692	junction_31	228526.59386818137	NA	0	NA	TRUE	NA	NA	NA	C	coding	1044	3135	96	3230	35.0	6879	False	NA	NA
PB.4647.23	chr17	-	1895	14	incomplete-splice_match	MYO1C	ENST00000648446.1	4724	32	-20	13010	-20	94	3prime_fragment	FALSE	canonical	1	200692	junction_13	186795.64052918917	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	70	1590	85.0	-21	True	NA	NA
PB.4112.3	chr15	+	4007	12	incomplete-splice_match	LRRK1	ENST00000531270.5	6015	32	125038	-1035	-3696	0	5prime_fragment	FALSE	canonical	1	72078	junction_5	17902.724937333373	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	50	2752	30.0	-7693	False	AATAAA	-12
PB.4647.28	chr17	-	1753	12	full-splice_match	INPP5K	ENST00000421807.6	2988	12	197	1038	-11	-42	multi-exon	FALSE	canonical	1	213837	junction_11	69271.03464956682	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	193	1539	35.0	13	True	AATACA	-15
PB.6937.22	chr2	+	2128	5	incomplete-splice_match	BZW1	ENST00000409226.5	2455	12	6177	-595	36	595	5prime_fragment	FALSE	canonical	1	396	junction_3	432.0251005439383	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	6	473	25.0	-5505	False	AATAAA	-14
PB.7249.1	chr20	+	4386	25	full-splice_match	ITCH	ENST00000374864.8	6401	25	41	1974	0	1304	multi-exon	FALSE	canonical	1	240673	junction_10	67420.56480869367	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	173	2761	65.0	3	True	NA	NA
PB.7249.3	chr20	+	3069	25	full-splice_match	ITCH	ENST00000374864.8	6401	25	38	3294	-3	-16	multi-exon	FALSE	canonical	1	240673	junction_10	67420.56480869367	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	176	2764	15.0	0	True	NA	NA
PB.7249.2	chr20	+	3642	25	full-splice_match	ITCH	ENST00000374864.8	6401	25	36	2723	-5	555	multi-exon	FALSE	canonical	1	240673	junction_10	67420.56480869367	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	178	2766	80.0	-2	True	NA	NA
PB.7249.5	chr20	+	2812	24	novel_in_catalog	ITCH	novel	6401	25	NA	NA	-4	-103	no_combination_of_known_junctions	FALSE	canonical	1	6122	junction_2	98917.99839864689	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	416	2674	25.0	-1	True	AGTAAA	-16
PB.7249.4	chr20	+	2898	25	novel_in_catalog	ITCH	novel	6401	25	NA	NA	5	-101	combination_of_known_junctions	FALSE	canonical	1	30230	junction_2	93434.71692250633	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	170	2758	20.0	27	True	AGTAAA	-18
PB.7249.7	chr20	+	2900	25	full-splice_match	ITCH	ENST00000374864.8	6401	25	40	3461	-1	-103	multi-exon	FALSE	canonical	1	240673	junction_10	67420.56480869367	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	174	2762	25.0	2	True	AGTAAA	-16
PB.7249.6	chr20	+	5456	25	full-splice_match	ITCH	ENST00000374864.8	6401	25	38	907	-3	-907	multi-exon	FALSE	canonical	1	240673	junction_10	67420.56480869367	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	176	2764	75.0	0	True	NA	NA
PB.7249.9	chr20	+	3644	25	novel_in_catalog	ITCH	novel	6401	25	NA	NA	-6	554	combination_of_known_junctions	FALSE	canonical	1	30230	junction_2	93434.71692250633	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	181	2769	80.0	16	True	NA	NA
PB.7249.8	chr20	+	4394	25	novel_in_catalog	ITCH	novel	6401	25	NA	NA	-6	1304	combination_of_known_junctions	FALSE	canonical	1	30230	junction_2	93434.71692250633	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	181	2769	65.0	16	True	NA	NA
PB.9695.2	chr6	+	2254	1	antisense	novelGene_SERPINB9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	3143	False	NA	NA
PB.1703.1	chr10	+	2264	9	full-splice_match	ABRAXAS2	ENST00000298492.5	2992	9	1	727	1	-727	multi-exon	FALSE	canonical	1	169563	junction_8	31200.058234871532	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	45	1292	40.0	-33	False	AATAAA	-43
PB.1703.2	chr10	+	2950	8	novel_in_catalog	ABRAXAS2	novel	2992	9	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	1451	junction_2	81202.56046455678	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	319	1254	20.0	-32	False	AATAAA	-18
PB.1703.3	chr10	+	3214	10	novel_not_in_catalog	ABRAXAS2	novel	2992	9	NA	NA	23	-2	any annotated donor/acceptor	TRUE	canonical	1	2602	junction_2	91789.29388927316	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	582	1517	20.0	-11	True	AATAAA	-19
PB.1703.4	chr10	+	2967	9	full-splice_match	ABRAXAS2	ENST00000298492.5	2992	9	24	1	24	-1	multi-exon	FALSE	canonical	1	169563	junction_8	31200.058234871532	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	22	1269	20.0	-10	True	AATAAA	-20
PB.10543.2	chr7	+	2251	1	antisense	novelGene_FIGNL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-5	True	NA	NA
PB.10543.1	chr7	+	2881	1	antisense	novelGene_FIGNL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-6	True	ATTAAA	-16
PB.7068.29	chr2	-	2478	15	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	-105	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	2148874.470800523	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	132	2195	20.0	-1	True	NA	NA
PB.8327.7	chr3	-	4857	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-46	3092	-46	-3092	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	143	1258	60.0	-1	True	TTTAAA	-3
PB.11343.2	chr8	-	3882	13	full-splice_match	FAM49B	ENST00000519540.5	2021	13	41	-1902	1	-2	multi-exon	FALSE	canonical	1	101445	junction_12	286819.74018888734	NA	6	NA	TRUE	NA	NA	NA	C	coding	324	975	361	1335	25.0	-21	True	NA	NA
PB.1351.10	chr10	+	1506	1	novel_in_catalog	MAP3K8	novel	3096	9	NA	NA	-19	-3330	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.4204.8	chr16	-	3863	6	novel_in_catalog	ZSCAN32	novel	3173	7	NA	NA	0	-1	intron_retention	FALSE	canonical	1	33806	junction_3	18664.26993589623	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	260	1540	5.0	-16	True	AATAAA	-16
PB.922.1	chr1	+	3898	1	full-splice_match	AL021068.1	ENST00000392097.4	911	1	36	-3023	36	3023	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-29	True	NA	NA
PB.1090.12	chr1	+	3123	12	full-splice_match	CD46	ENST00000354848.5	3233	12	107	3	41	-3	multi-exon	FALSE	canonical	1	996227	junction_3	274260.14181276324	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	50	1204	20.0	0	True	AATAAA	-21
PB.2919.11	chr12	+	2189	6	full-splice_match	OAS1	ENST00000202917.9	1816	6	195	-568	-1	568	multi-exon	FALSE	canonical	1	203072	junction_5	150373.73161426833	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	69	1271	30.0	-1	True	NA	NA
PB.4112.1	chr15	+	7537	34	full-splice_match	LRRK1	ENST00000388948.7	7671	34	132	2	2	-2	multi-exon	FALSE	canonical	1	28346	junction_1	22400.82541560189	NA	1	NA	TRUE	NA	NA	NA	C	coding	2005	6018	258	6275	10.0	-10	True	AATAAA	-19
PB.2446.3	chr12	+	3114	15	full-splice_match	PEX5	ENST00000266563.9	3252	15	109	29	-4	-26	multi-exon	FALSE	canonical	1	109435	junction_1	91816.55590593982	NA	1	NA	TRUE	NA	NA	NA	C	coding	602	1809	75	1883	50.0	-10	True	AATAAA	-20
PB.2446.2	chr12	+	3285	16	novel_in_catalog	PEX5	novel	575	6	NA	NA	-5	-27	combination_of_known_junctions	TRUE	canonical	1	6734	junction_1	110000.83778763788	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	271	2055	50.0	-11	True	AATAAA	-19
PB.2446.1	chr12	+	3250	16	novel_in_catalog	PEX5	novel	575	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	109435	junction_1	93008.84803357867	NA	1	NA	TRUE	NA	NA	NA	C	coding	639	1920	74	1993	20.0	-9	True	AATAAA	-18
PB.2446.7	chr12	+	3261	16	novel_not_in_catalog	PEX5	novel	575	6	NA	NA	16	-1	any annotated donor/acceptor	FALSE	canonical	1	2116	junction_1	105387.37810792252	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	110	2005	20.0	-7	True	AATAAA	-45
PB.2446.6	chr12	+	3100	15	novel_in_catalog	PEX5	novel	575	6	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	28239	junction_8	94282.73147340787	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	57	1841	20.0	8	True	AATAAA	-20
PB.2446.5	chr12	+	3171	15	novel_in_catalog	PEX5	novel	575	6	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	3898	junction_2	112439.26920133647	NA	1	NA	TRUE	NA	NA	NA	C	coding	617	1854	63	1916	15.0	2	True	AATAAA	-44
PB.2446.4	chr12	+	3288	16	full-splice_match	PEX5	ENST00000434354.6	2253	16	16	-1051	-4	-1	multi-exon	TRUE	canonical	1	3898	junction_2	111390.46469416592	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	65	2029	20.0	0	True	AATAAA	-20
PB.1286.1	chr10	+	3831	8	incomplete-splice_match	ATP5F1C	ENST00000335698.4	1078	9	-18	2069	0	-2047	3prime_fragment	TRUE	canonical	1	1504359	junction_7	476439.4281295453	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	50	943	100.0	-18	False	NA	NA
PB.1713.5	chr10	-	9147	14	full-splice_match	MKI67	ENST00000368653.7	11417	14	-215	2485	-34	2340	multi-exon	FALSE	canonical	1	90457	junction_8	210591.01456637384	NA	1	NA	TRUE	NA	NA	NA	C	coding	2896	8691	411	9101	20.0	3	True	AATAAA	-15
PB.1286.3	chr10	+	1093	10	full-splice_match	ATP5F1C	ENST00000356708.11	1163	10	47	23	1	-1	multi-exon	FALSE	canonical	1	683570	junction_8	763398.9882173566	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	105	929	45.0	-1	True	AATAAA	-7
PB.1286.4	chr10	+	1667	9	novel_in_catalog	ATP5F1C	novel	1163	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	683570	junction_7	795446.408769472	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	30	461	45.0	2	True	AATAAA	-7
PB.8377.8	chr3	+	3524	11	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	8320	junction_1	651515.9301715422	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	234	1505	15.0	-31	True	AATAAA	-18
PB.1713.1	chr10	-	11492	15	full-splice_match	MKI67	ENST00000368654.7	12678	15	-39	1225	-39	-1225	multi-exon	FALSE	canonical	1	144615	junction_8	202516.3934129778	NA	0	NA	TRUE	NA	NA	NA	C	coding	3256	9771	416	10186	25.0	-2	True	NA	NA
PB.7513.3	chr21	+	4188	17	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	8	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	166034.0373480973	NA	2	1	TRUE	NA	NA	NA	B	coding	939	2820	27	2846	40.0	0	True	AATAAA	-28
PB.7513.2	chr21	+	4313	18	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	8	-16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	178774.120454007	NA	0	NA	TRUE	NA	NA	NA	B	coding	868	2607	373	2979	30.0	-42	True	AATAAA	-20
PB.2745.1	chr12	-	3614	4	full-splice_match	LINC02384	ENST00000441255.6	567	4	-166	-2881	13	-4	multi-exon	FALSE	canonical	1	2700	junction_1	5161.649628644789	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	45	True	NA	NA
PB.11343.5	chr8	-	3670	11	novel_in_catalog	FAM49B	novel	3798	12	NA	NA	17	-2	intron_retention	FALSE	canonical	1	105891	junction_9	343285.4382516247	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	587	1123	25.0	21	True	NA	NA
PB.7513.7	chr21	+	4117	16	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	-20	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	181858.91475016193	NA	3	NA	TRUE	NA	NA	NA	B	coding	555	1668	1109	2776	40.0	-28	True	AATAAA	-27
PB.7513.6	chr21	+	6389	17	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	-8	2177	intron_retention	FALSE	non_canonical	0	0	junction_4	166034.0373480973	NA	37	2	TRUE	NA	NA	NA	B	coding	939	2820	43	2862	50.0	-16	True	NA	NA
PB.1713.9	chr10	-	9745	14	incomplete-splice_match	MKI67	ENST00000368654.7	12678	15	-32	4967	-32	-142	3prime_fragment	FALSE	canonical	1	144615	junction_7	161497.51526899467	NA	6	NA	TRUE	NA	NA	NA	C	coding	3112	9336	409	9744	70.0	5	True	NA	NA
PB.7513.4	chr21	+	4799	17	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	12	565	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	166034.0373480973	NA	0	NA	TRUE	NA	NA	NA	B	coding	939	2820	65	2884	25.0	-38	True	NA	NA
PB.11295.3	chr8	+	3857	17	novel_not_in_catalog	AC027031.2	novel	1318	2	NA	NA	-45	478962	any annotated donor/acceptor	FALSE	canonical	1	16876	junction_1	98383.57132685998	NA	0	NA	TRUE	NA	NA	NA	B	coding	873	2622	316	2937	70.0	-54	True	AATATA	-15
PB.8742.5	chr4	-	4228	25	full-splice_match	RFC1	ENST00000349703.6	4859	25	-11	642	0	599	multi-exon	FALSE	canonical	1	216789	junction_24	79203.24294860904	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	122	3565	35.0	-1	True	ATTAAA	-23
PB.1353.7	chr10	+	2698	8	incomplete-splice_match	ZEB1	ENST00000361642.9	5990	9	44	5806	0	0	3prime_fragment	FALSE	canonical	1	130574	junction_2	54626.721158145636	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2679	20	2698	60.0	0	True	NA	NA
PB.8377.9	chr3	+	4356	13	novel_not_in_catalog	SEC61A1	novel	1871	12	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	1174	junction_9	745754.9067149033	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	1672	2337	15.0	-30	True	AATAAA	-18
PB.1353.6	chr10	+	1498	7	incomplete-splice_match	ZEB1	ENST00000320985.14	5423	9	87	8392	0	-1	3prime_fragment	FALSE	canonical	1	100892	junction_2	58403.87820075726	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1473	24	1496	60.0	-4	True	NA	NA
PB.4679.10	chr17	-	1884	10	incomplete-splice_match	ANKFY1	ENST00000574367.5	5033	25	2	28205	2	-18	3prime_fragment	FALSE	canonical	1	77655	junction_9	53412.3123961711	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	14	1477	100.0	1	True	CATAAA	-39
PB.8742.2	chr4	-	4870	25	full-splice_match	RFC1	ENST00000349703.6	4859	25	-10	-1	1	1	multi-exon	FALSE	canonical	1	216789	junction_24	79203.24294860904	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	121	3564	15.0	0	True	AATAAA	-20
PB.11930.1	chr9	+	1602	8	full-splice_match	ARRDC1	ENST00000371421.8	1586	8	-15	-1	-15	0	multi-exon	FALSE	canonical	1	242707	junction_1	135743.19085249296	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	80	1381	10.0	-15	True	AATAAA	-16
PB.9601.2	chr5	-	2462	2	full-splice_match	ZBED8	ENST00000408953.3	2851	2	11	378	11	2	multi-exon	FALSE	canonical	1	26542	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	498	2282	25.0	-10	True	NA	NA
PB.9601.1	chr5	-	2829	2	full-splice_match	ZBED8	ENST00000408953.3	2851	2	20	2	20	-2	multi-exon	FALSE	canonical	1	26542	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	594	1785	489	2273	20.0	-1	True	AATAAA	-15
PB.1358.1	chr10	+	2732	1	intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.1353.3	chr10	+	5644	11	full-splice_match	ZEB1	ENST00000437844.6	6246	11	-12	614	-8	-2	multi-exon	FALSE	canonical	1	8435	junction_1	107912.462120415	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	988	3708	20.0	-12	True	AATAAA	-18
PB.1353.2	chr10	+	5348	9	full-splice_match	ZEB1	ENST00000361642.9	5990	9	29	613	-11	-2	multi-exon	FALSE	canonical	1	130574	junction_2	51401.78908304165	NA	1	NA	TRUE	NA	NA	NA	C	coding	1125	3378	35	3412	20.0	-15	True	AATAAA	-18
PB.10955.9	chr7	-	3888	28	novel_not_in_catalog	NCAPG2	novel	4134	30	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	22264	junction_1	134852.29997807686	NA	0	NA	TRUE	NA	NA	NA	C	coding	1109	3330	121	3450	25.0	-2	True	AATAAA	-13
PB.3903.1	chr15	+	2461	5	novel_not_in_catalog	GCNT3	novel	549	6	NA	NA	-45815	-3	any annotated donor/acceptor	FALSE	canonical	1	540	junction_1	32693.588800979007	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	695	2011	30.0	NA	False	AATAAA	-14
PB.3903.2	chr15	+	2215	3	full-splice_match	GCNT3	ENST00000396065.2	4933	3	4	2714	4	1	multi-exon	FALSE	canonical	1	67239	junction_1	1615.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	445	1761	15.0	5	True	AATAAA	-18
PB.1090.17	chr1	+	4833	11	novel_not_in_catalog	CD46	novel	3371	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	740	junction_6	486581.777609571	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	148	1122	20.0	-46	True	AATAAA	-23
PB.8742.3	chr4	-	4814	24	novel_in_catalog	RFC1	novel	4859	25	NA	NA	-9	0	intron_retention	FALSE	canonical	1	19095	junction_18	111034.2730574272	NA	1	NA	TRUE	NA	NA	NA	C	coding	1121	3366	144	3509	15.0	-23	True	AATAAA	-19
PB.11177.5	chr8	-	2376	7	novel_in_catalog	TRAM1	novel	3394	11	NA	NA	-2	2	intron_retention	FALSE	canonical	1	248	junction_5	816947.3080422969	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	309	884	10.0	8	True	AATAAA	-20
PB.2670.2	chr12	+	2618	4	incomplete-splice_match	MYL6	ENST00000550184.5	1564	6	-3	-30	0	5	intron_retention	FALSE	canonical	1	13801285	junction_1	1865514.66181254	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	1037	1369	0.0	-13	True	AATAAA	-20
PB.2670.3	chr12	+	701	7	full-splice_match	MYL6	ENST00000550697.5	901	7	198	2	1	-2	multi-exon	FALSE	canonical	1	6547527	junction_6	4447146.158321815	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	44	499	0.0	0	True	AATAAA	-12
PB.60.5	chr1	-	3208	16	full-splice_match	DNAJC11	ENST00000377577.9	3311	16	100	3	-1	-3	multi-exon	FALSE	canonical	1	346547	junction_6	108170.8813901823	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	25	1704	10.0	-19	True	AATAAA	-15
PB.2670.1	chr12	+	1767	5	full-splice_match	MYL6	ENST00000551589.5	1438	5	-52	-277	-29	0	multi-exon	FALSE	canonical	1	12808090	junction_2	2151150.703118958	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	86	523	0.0	-5029	False	AATAAA	-15
PB.2670.6	chr12	+	2848	3	novel_in_catalog	MYL6B	novel	223	4	NA	NA	744	1932	intron_retention	FALSE	canonical	1	13801285	junction_1	2284776.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	0.0	0	True	AATAAA	-19
PB.2670.7	chr12	+	2962	1	novel_in_catalog	MYL6	novel	683	7	NA	NA	-615	-588	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-3925	False	NA	NA
PB.2670.4	chr12	+	662	6	full-splice_match	MYL6	ENST00000547649.5	655	6	-3	-4	1	3	multi-exon	FALSE	canonical	1	9238073	junction_5	3085433.801933297	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	44	499	0.0	0	True	AATAAA	-18
PB.2670.5	chr12	+	3408	4	incomplete-splice_match	MYL6	ENST00000550184.5	1564	6	10	-833	1	-587	intron_retention	FALSE	canonical	1	13801285	junction_1	1865514.66181254	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	1024	1356	90.0	0	True	NA	NA
PB.8315.2	chr3	+	5290	12	full-splice_match	ARHGAP31	ENST00000264245.8	9317	12	-51	4078	-51	-4078	multi-exon	FALSE	canonical	1	68898	junction_3	10533.614999546817	NA	0	NA	TRUE	NA	NA	NA	C	coding	1444	4335	584	4918	55.0	-6	True	AAGAAA	-17
PB.8315.3	chr3	+	6018	12	novel_not_in_catalog	ARHGAP31	novel	9317	12	NA	NA	248	-2991	any annotated donor/acceptor	FALSE	canonical	1	5063	junction_9	26891.540597416122	NA	2	NA	TRUE	NA	NA	NA	C	coding	1424	4275	285	4559	25.0	-6495	False	AATAAA	-26
PB.8315.1	chr3	+	6056	12	full-splice_match	ARHGAP31	ENST00000264245.8	9317	12	268	2993	268	-2993	multi-exon	FALSE	canonical	1	68898	junction_3	10533.614999546817	NA	1	NA	TRUE	NA	NA	NA	C	coding	1444	4335	265	4599	30.0	3	True	AATAAA	-24
PB.8315.6	chr3	+	4433	1	full-splice_match	RPS26P21	ENST00000475397.1	348	1	-4018	-67	-4018	67	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	9	True	AATAAA	-16
PB.8315.7	chr3	+	2613	11	incomplete-splice_match	ARHGAP31	ENST00000264245.8	9317	12	294	10489	294	-10489	3prime_fragment	FALSE	canonical	1	68898	junction_3	10225.577110363993	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	239	2245	5.0	29	True	AATAAA	-15
PB.8315.4	chr3	+	4839	11	incomplete-splice_match	ARHGAP31	ENST00000264245.8	9317	12	234	8323	234	-8323	3prime_fragment	FALSE	canonical	1	68898	junction_3	10225.577110363993	NA	3	NA	TRUE	NA	NA	NA	C	coding	668	2007	299	2305	90.0	1	True	NA	NA
PB.5036.18	chr17	-	3017	20	novel_in_catalog	UBTF	novel	4684	20	NA	NA	308	0	combination_of_known_junctions	FALSE	canonical	1	26945	junction_19	327956.79401791585	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	186	2369	5.0	-37	True	NA	NA
PB.5036.17	chr17	-	3070	20	full-splice_match	UBTF	ENST00000343638.9	4684	20	53	1561	53	0	multi-exon	FALSE	canonical	1	112785	junction_19	317018.92068409163	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	239	2422	5.0	-32	True	NA	NA
PB.5036.16	chr17	-	3129	21	full-splice_match	UBTF	ENST00000302904.8	4997	21	307	1561	307	0	multi-exon	FALSE	canonical	1	26945	junction_20	343578.18881695624	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	187	2481	5.0	-38	True	NA	NA
PB.5036.15	chr17	-	3098	21	full-splice_match	UBTF	ENST00000436088.5	2738	21	-34	-326	-34	0	multi-exon	FALSE	canonical	1	129291	junction_20	332354.8834099027	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	156	2450	5.0	2577	False	NA	NA
PB.5036.14	chr17	-	3475	22	novel_in_catalog	UBTF	novel	4684	20	NA	NA	-319	0	combination_of_known_junctions	FALSE	canonical	1	6435	junction_5	409523.8696849624	NA	1	NA	TRUE	NA	NA	NA	C	coding	647	1944	150	2093	5.0	-1	True	NA	NA
PB.5036.13	chr17	-	2955	20	novel_not_in_catalog	UBTF	novel	4684	20	NA	NA	-25	1	any annotated donor/acceptor	FALSE	canonical	1	11651	junction_4	366990.5936940124	NA	2	NA	TRUE	NA	NA	NA	C	coding	719	2160	147	2306	0.0	-26	True	NA	NA
PB.5036.12	chr17	-	2978	20	full-splice_match	UBTF	ENST00000393606.7	2683	20	229	-524	-23	2	multi-exon	FALSE	canonical	1	129291	junction_19	315005.87522995594	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	145	2328	0.0	-24	True	NA	NA
PB.11426.7	chr9	+	2189	8	full-splice_match	SMARCA2	ENST00000302401.8	2242	8	0	53	0	0	multi-exon	FALSE	canonical	1	1698	junction_1	307974.93220224854	NA	3	NA	TRUE	NA	NA	NA	C	coding	278	837	521	1357	20.0	-14	True	AATAAA	-15
PB.603.3	chr1	+	5900	1	full-splice_match	RBM15	ENST00000602849.1	3368	1	102	-2634	-41	-1353	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	913	2742	114	2855	70.0	0	True	TTTAAA	-36
PB.603.2	chr1	+	7124	1	full-splice_match	RBM15	ENST00000602849.1	3368	1	110	-3866	-33	-121	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	913	2742	106	2847	60.0	8	True	NA	NA
PB.603.1	chr1	+	7250	1	full-splice_match	RBM15	ENST00000602849.1	3368	1	101	-3983	-42	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	913	2742	115	2856	25.0	-1	True	AATAAA	-16
PB.8327.6	chr3	-	5018	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-42	2927	-42	-2927	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	139	1254	80.0	3	True	NA	NA
PB.603.6	chr1	+	3092	2	full-splice_match	RBM15	ENST00000487146.6	3316	2	109	115	-34	-115	multi-exon	FALSE	canonical	1	40210	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	925	2778	107	2884	45.0	7	True	NA	NA
PB.9196.21	chr5	-	3130	2	full-splice_match	PRKAA1	ENST00000511248.1	668	2	-18	-2444	-3	2444	multi-exon	FALSE	canonical	1	510717	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.9196.20	chr5	-	3784	8	novel_in_catalog	PRKAA1	novel	5088	9	NA	NA	-3	103	intron_retention	FALSE	canonical	1	42402	junction_6	206030.12642012787	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	2182	3441	45.0	-1	True	ATTAAA	-14
PB.603.9	chr1	+	5143	1	full-splice_match	RBM15	ENST00000602849.1	3368	1	2216	-3991	2073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	167	504	238	741	20.0	-1992	False	AATAAA	-24
PB.7057.31	chr2	+	1624	17	novel_in_catalog	SP100	novel	3882	25	NA	NA	-15	3906	combination_of_known_junctions	FALSE	canonical	1	96814	junction_15	197061.0873880546	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1533	92	1624	70.0	-14	True	AAAACA	-27
PB.5710.23	chr19	+	2257	9	incomplete-splice_match	ILF3	ENST00000588657.5	2697	19	11161	-514	-1751	-20	5prime_fragment	FALSE	canonical	1	416880	junction_6	651152.9004559912	NA	2	1	TRUE	NA	NA	NA	C	coding	563	1692	52	1743	75.0	737	False	NA	NA
PB.11138.12	chr8	+	2144	12	novel_in_catalog	LYN	novel	2297	13	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	9501	junction_1	217155.00495435807	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	411	1682	85.0	-6	True	NA	NA
PB.5710.20	chr19	+	2555	10	incomplete-splice_match	ILF3	ENST00000589998.5	2622	18	25982	-1006	1158	2	5prime_fragment	FALSE	canonical	1	1307025	junction_5	442128.0638022829	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	150	1253	5.0	-687	False	AATACA	-17
PB.7261.2	chr20	+	2030	12	novel_in_catalog	ERGIC3	novel	1359	13	NA	NA	12	0	intron_retention	FALSE	canonical	1	1906309	junction_1	700121.0440854655	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	49	1014	15.0	-29	True	GATAAA	-23
PB.7261.1	chr20	+	1330	13	full-splice_match	ERGIC3	ENST00000348547.6	1359	13	28	1	11	0	multi-exon	FALSE	canonical	1	1906309	junction_1	671112.0434059997	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	50	1201	15.0	-30	True	GATAAA	-23
PB.11716.28	chr9	-	2342	21	novel_in_catalog	ECPAS	novel	7078	49	NA	NA	117	-3456	no_combination_of_known_junctions	FALSE	canonical	1	20701	junction_20	136099.6588830773	NA	0	NA	TRUE	NA	NA	NA	C	coding	733	2199	142	2340	45.0	-1	True	TATAAA	-7
PB.6687.5	chr2	-	3598	26	novel_not_in_catalog	BUB1	novel	3576	24	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	264	junction_25	138175.76555621612	NA	2	NA	TRUE	NA	NA	NA	C	coding	1071	3216	253	3468	40.0	-2	True	AATAAA	-22
PB.11295.7	chr8	+	4297	14	novel_in_catalog	OXR1	novel	3599	15	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	12876	junction_1	100742.99160618227	NA	1	NA	TRUE	NA	NA	NA	C	coding	758	2277	277	2553	45.0	-2	True	ACTAAA	-42
PB.3136.4	chr13	-	1514	11	full-splice_match	EPSTI1	ENST00000313624.11	3114	11	1	1599	1	507	multi-exon	FALSE	canonical	1	177963	junction_1	70263.97284818158	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	84	1007	30.0	-8	True	AATAAA	-18
PB.3405.1	chr14	-	992	7	full-splice_match	FKBP3	ENST00000396062.3	1346	7	51	303	5	-303	multi-exon	FALSE	canonical	1	846532	junction_6	356995.96829516155	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	23	697	15.0	2	True	AATAAA	-19
PB.3136.5	chr13	-	1647	12	full-splice_match	EPSTI1	ENST00000398762.7	957	12	-183	-507	-77	507	multi-exon	FALSE	canonical	1	43343	junction_5	110290.21744372945	NA	1	1	TRUE	NA	NA	NA	C	coding	318	957	184	1140	30.0	-108	False	AATAAA	-18
PB.664.2	chr1	-	4607	21	novel_not_in_catalog	NBPF15	novel	4272	19	NA	NA	-11	-106	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	103.08796001473695	NA	3	NA	TRUE	NA	NA	NA	B	coding	670	2013	1078	3090	15.0	10	True	ATTAAA	-15
PB.7029.4	chr2	-	2349	15	full-splice_match	DNPEP	ENST00000273075.8	2425	15	76	0	-7	0	multi-exon	FALSE	canonical	1	349876	junction_14	162308.04878166463	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	176	1603	85.0	-33	True	NA	NA
PB.5868.4	chr19	-	3223	3	full-splice_match	ZNF506	ENST00000450683.6	1385	3	3	-1841	3	-1739	multi-exon	FALSE	canonical	1	4575	junction_1	44399.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	144	1382	25.0	0	True	AATAAA	-16
PB.2911.10	chr12	+	2301	14	novel_not_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	237	262	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	138011.1044089479	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	538	1749	15.0	-13	True	AGTAAA	-22
PB.2911.11	chr12	+	2029	14	novel_not_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	245	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	138011.1044089479	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	530	1930	30.0	-5	True	AATAAA	-19
PB.2911.12	chr12	+	1953	13	novel_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	248	-1	no_combination_of_known_junctions	FALSE	canonical	1	7071	junction_2	145125.22410940682	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	634	1854	30.0	-2	True	AATAAA	-19
PB.2911.13	chr12	+	2186	13	novel_in_catalog	MAPKAPK5	novel	11349	14	NA	NA	-244	251	no_combination_of_known_junctions	FALSE	canonical	1	40285	junction_5	136777.90386913135	NA	6	NA	TRUE	NA	NA	NA	C	coding	437	1314	522	1835	20.0	3	True	AGTAAA	-11
PB.664.8	chr1	-	3608	5	novel_not_in_catalog	NBPF15	novel	4272	19	NA	NA	-37	-553	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	10	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-43	False	NA	NA
PB.664.9	chr1	-	3627	5	novel_not_in_catalog	NBPF15	novel	4272	19	NA	NA	-12	-558	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	5	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	9	True	NA	NA
PB.6687.1	chr2	-	5835	25	novel_not_in_catalog	BUB1	novel	3576	24	NA	NA	0	2228	any annotated donor/acceptor	FALSE	canonical	1	3968	junction_11	114651.48446862507	NA	3	1	TRUE	NA	NA	NA	C	coding	1090	3273	69	3341	5.0	-1	True	NA	NA
PB.1438.11	chr10	+	2568	17	incomplete-splice_match	CCAR1	ENST00000539539.5	3224	22	-14	16904	-1	-6	3prime_fragment	FALSE	canonical	1	48332	junction_3	163762.7308155074	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2460	109	2568	70.0	-14	True	NA	NA
PB.1438.10	chr10	+	2683	19	incomplete-splice_match	CCAR1	ENST00000265872.10	4683	25	11	19353	-1	1580	3prime_fragment	FALSE	canonical	1	362651	junction_1	100887.06873763468	NA	1	NA	TRUE	NA	NA	NA	C	coding	858	2574	109	2682	55.0	-14	True	GATAAA	-26
PB.1438.13	chr10	+	2252	16	novel_in_catalog	CCAR1	novel	552	6	NA	NA	-1	3808	combination_of_known_junctions	FALSE	canonical	1	19707	junction_1	144712.00817230827	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2019	233	2251	70.0	-14	True	ATTAAA	-45
PB.1438.12	chr10	+	2385	17	novel_in_catalog	CCAR1	novel	552	6	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	749	junction_1	168195.79646111105	NA	1	1	TRUE	NA	NA	NA	C	coding	603	1809	577	2385	80.0	-14	True	NA	NA
PB.1438.15	chr10	+	3839	25	full-splice_match	CCAR1	ENST00000265872.10	4683	25	16	828	3	194	multi-exon	FALSE	canonical	1	362651	junction_1	139311.55740820023	NA	0	NA	TRUE	NA	NA	NA	C	coding	1150	3453	104	3556	35.0	-9	True	AATAAA	-12
PB.1438.14	chr10	+	3233	22	full-splice_match	CCAR1	ENST00000539539.5	3224	22	-11	2	1	-2	multi-exon	FALSE	canonical	1	48332	junction_3	185975.84060134983	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3126	106	3231	60.0	-11	True	AAAAAG	-35
PB.1438.17	chr10	+	1920	15	novel_not_in_catalog	CCAR1	novel	552	6	NA	NA	-4	3565	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	217398.73440317457	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	99	1481	90.0	-4	True	NA	NA
PB.1438.16	chr10	+	2605	18	incomplete-splice_match	CCAR1	ENST00000265872.10	4683	25	19	20965	6	-6	3prime_fragment	FALSE	canonical	1	362651	junction_1	103803.87785143933	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2505	101	2605	70.0	-6	True	NA	NA
PB.1438.19	chr10	+	2422	19	novel_not_in_catalog	CCAR1	novel	552	6	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	164106.68827937724	NA	2	1	TRUE	NA	NA	NA	C	coding	775	2325	98	2422	70.0	-3	True	NA	NA
PB.1438.18	chr10	+	2713	18	novel_not_in_catalog	CCAR1	novel	552	6	NA	NA	-3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	166577.55553038203	NA	2	NA	TRUE	NA	NA	NA	C	coding	680	2043	98	2140	80.0	-3	True	NA	NA
PB.638.2	chr1	+	2502	7	full-splice_match	MAB21L3	ENST00000369500.3	3229	7	-293	1020	-293	-1020	multi-exon	FALSE	canonical	1	5222	junction_1	3399.767720823815	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	559	1647	20.0	-1	True	NA	NA
PB.2287.6	chr11	-	4253	22	novel_not_in_catalog	USP28	novel	4669	25	NA	NA	-8315	0	any annotated donor/acceptor	FALSE	canonical	1	62	junction_21	55723.00985838799	NA	3	NA	TRUE	NA	NA	NA	C	coding	920	2763	125	2887	10.0	NA	False	AATAAA	-15
PB.1356.1	chr10	-	2498	1	intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	117	354	1841	2194	45.0	-14	True	AATAAA	-12
PB.3522.12	chr14	-	3628	21	novel_in_catalog	ACTN1	novel	3779	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	10786	junction_20	551532.2816920398	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	477	3092	30.0	7903	False	ATTAAA	-13
PB.3522.11	chr14	-	3288	21	novel_not_in_catalog	ACTN1	novel	3779	21	NA	NA	-429	-2	any annotated donor/acceptor	FALSE	canonical	1	1599	junction_20	553337.2715079837	NA	2	NA	TRUE	NA	NA	NA	C	coding	827	2484	266	2749	25.0	3109	False	ATTAAA	-16
PB.2287.7	chr11	-	4153	21	novel_in_catalog	USP28	novel	4669	25	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	6495	junction_11	66849.42116449102	NA	2	NA	TRUE	NA	NA	NA	C	coding	860	2583	205	2787	10.0	-9	True	AATAAA	-15
PB.3522.17	chr14	-	3111	21	full-splice_match	ACTN1	ENST00000438964.6	3043	21	-64	-4	-64	4	multi-exon	FALSE	canonical	1	401131	junction_3	607132.0709099689	NA	7	2	TRUE	NA	NA	NA	C	coding	887	2664	271	2934	75.0	-7	True	NA	NA
PB.1885.10	chr11	-	3238	1	novel_in_catalog	FBXO3	novel	3740	11	NA	NA	0	-8077	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	AATGAA	-38
PB.3522.15	chr14	-	2911	21	full-splice_match	ACTN1	ENST00000193403.10	3779	21	329	539	-35	4	multi-exon	FALSE	canonical	1	1863077	junction_20	256670.35069888772	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	56	2734	75.0	7526	False	NA	NA
PB.4726.1	chr17	+	1394	8	full-splice_match	ELP5	ENST00000396628.6	1423	8	19	10	19	-1	multi-exon	FALSE	canonical	1	375762	junction_7	120116.53900717097	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	199	1149	45.0	48	True	AATAAA	-18
PB.4726.2	chr17	+	1975	6	full-splice_match	ELP5	ENST00000574993.5	2209	6	225	9	-14	0	multi-exon	FALSE	canonical	1	483257	junction_5	101987.34863030806	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	41	832	50.0	-42	True	AATAAA	-19
PB.3522.18	chr14	-	2728	20	novel_in_catalog	ACTN1	novel	3779	21	NA	NA	-35	4	combination_of_known_junctions	FALSE	canonical	1	37308	junction_6	560203.6331190852	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	56	2551	75.0	7526	False	NA	NA
PB.2287.1	chr11	-	4542	24	novel_in_catalog	USP28	novel	4669	25	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	51830	junction_23	51339.336227568565	NA	2	NA	TRUE	NA	NA	NA	C	coding	1045	3138	35	3172	15.0	-3	True	AATAAA	-19
PB.6489.35	chr2	-	5943	25	novel_in_catalog	XPO1	novel	4915	25	NA	NA	1	0	intron_retention	FALSE	canonical	1	114415	junction_22	349103.2422569667	NA	3	NA	TRUE	NA	NA	NA	C	coding	940	2823	2236	5058	20.0	-2	True	AATAAA	-15
PB.6489.37	chr2	-	5239	27	novel_not_in_catalog	XPO1	novel	4915	25	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1409	junction_22	515130.4043630431	NA	5	NA	TRUE	NA	NA	NA	C	coding	940	2823	1532	4354	20.0	-13	True	AATAAA	-15
PB.11295.5	chr8	+	3580	14	full-splice_match	OXR1	ENST00000312046.10	4406	14	-4	830	-4	3	multi-exon	FALSE	canonical	1	63576	junction_13	91942.40439381589	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	138	2657	60.0	-6	True	AATATA	-18
PB.8883.2	chr4	-	3102	6	full-splice_match	SNCA	ENST00000394991.7	1290	6	136	-1948	-16	0	multi-exon	FALSE	canonical	1	580371	junction_5	491694.25324467645	NA	5	NA	TRUE	NA	NA	NA	C	coding	140	423	157	579	30.0	1211	False	AATAAA	-15
PB.5783.18	chr19	-	1668	12	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	77837	junction_6	612233.5999106904	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	885	1553	20.0	-9	True	AATAAA	-14
PB.5783.19	chr19	-	2887	7	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1221387	junction_6	283676.4146204067	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	73	558	20.0	3	True	AATAAA	-13
PB.5783.16	chr19	-	1962	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	1	-2	intron_retention	FALSE	canonical	1	54150	junction_4	669073.4088270928	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	76	702	20.0	0	True	AATAAA	-14
PB.5783.17	chr19	-	1834	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	9	-2	intron_retention	FALSE	canonical	1	902151	junction_6	318409.12530850683	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	94	1044	20.0	-18	True	AATAAA	-14
PB.5783.14	chr19	-	2087	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	1	-2	intron_retention	FALSE	canonical	1	124770	junction_5	535872.3769890333	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	76	702	20.0	0	True	AATAAA	-14
PB.2287.3	chr11	-	4932	25	novel_in_catalog	USP28	novel	4669	25	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	1	6276	junction_24	63939.76045943068	NA	2	NA	TRUE	NA	NA	NA	C	coding	1042	3129	435	3563	10.0	6	True	AATAAA	-18
PB.5783.12	chr19	-	2238	8	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1221387	junction_7	266615.8489747573	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	77	562	20.0	-1	True	AATAAA	-14
PB.5783.13	chr19	-	2218	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	54150	junction_5	664416.763968572	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	1555	2103	20.0	-11	True	AATAAA	-14
PB.5783.10	chr19	-	2335	10	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	77837	junction_5	659705.5655262027	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	1672	2220	20.0	-1	True	AATAAA	-14
PB.5783.11	chr19	-	2295	9	novel_in_catalog	DDX39A	novel	1813	4	NA	NA	1	-2	intron_retention	FALSE	canonical	1	54150	junction_4	701356.3388602383	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	76	561	20.0	0	True	AATAAA	-14
PB.3530.2	chr14	-	469	4	full-splice_match	COX16	ENST00000389912.6	1717	4	52	1196	21	5	multi-exon	FALSE	canonical	1	1100045	junction_2	181566.25657318596	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	111	413	30.0	-3	True	AATAAA	-16
PB.3530.1	chr14	-	1668	4	full-splice_match	COX16	ENST00000389912.6	1717	4	48	1	17	-1	multi-exon	FALSE	canonical	1	1100045	junction_2	181566.25657318596	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	115	417	30.0	-7	True	AATAAA	-16
PB.11717.3	chr9	-	1397	10	full-splice_match	PTGR1	ENST00000407693.6	1407	10	4	6	4	0	multi-exon	FALSE	canonical	1	273310	junction_8	160427.74834312312	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	260	1249	35.0	13	False	AATAAA	-16
PB.11780.34	chr9	+	2606	10	full-splice_match	NEK6	ENST00000539416.5	2582	10	23	-47	23	47	multi-exon	FALSE	canonical	1	2681	junction_1	227777.9397161484	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	127	1068	40.0	392	False	TTTAAA	-45
PB.11717.2	chr9	-	1760	10	full-splice_match	PTGR1	ENST00000407693.6	1407	10	6	-359	6	-31	multi-exon	FALSE	canonical	1	273310	junction_8	160427.74834312312	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	258	1247	75.0	15	False	NA	NA
PB.9622.2	chr5	+	2815	10	full-splice_match	ERGIC1	ENST00000393784.7	2881	10	61	5	1	0	multi-exon	FALSE	canonical	1	810105	junction_1	396191.2984647819	NA	3	NA	TRUE	NA	NA	NA	C	coding	290	873	79	951	30.0	-8	True	ATTAAA	-15
PB.5498.9	chr18	+	4710	16	full-splice_match	MALT1	ENST00000345724.7	2866	16	44	-1888	10	-96	multi-exon	FALSE	canonical	1	85063	junction_6	80019.08170080434	NA	7	1	TRUE	NA	NA	NA	C	coding	813	2442	69	2510	55.0	44	True	NA	NA
PB.5498.8	chr18	+	2779	16	novel_in_catalog	MALT1	novel	9368	17	NA	NA	-8	-13	combination_of_known_junctions	FALSE	canonical	1	6092	junction_10	109914.91265815066	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	121	1587	20.0	-8	True	NA	NA
PB.612.9	chr1	-	1694	10	full-splice_match	WDR77	ENST00000235090.9	2576	10	128	754	128	584	multi-exon	FALSE	canonical	1	372963	junction_9	205839.4075233301	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	80	1108	35.0	7	True	ATTAAA	-18
PB.12042.8	chrX	-	4923	19	novel_not_in_catalog	SLC9A7	novel	10024	17	NA	NA	6	2611	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	50424.94211216739	NA	5	NA	TRUE	NA	NA	NA	C	coding	726	2181	138	2318	45.0	44	False	AATAAA	-12
PB.5498.3	chr18	+	4377	16	full-splice_match	MALT1	ENST00000345724.7	2866	16	50	-1561	16	-423	multi-exon	FALSE	canonical	1	85063	junction_6	80019.08170080434	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	63	2504	30.0	50	True	NA	NA
PB.5498.2	chr18	+	4827	16	full-splice_match	MALT1	ENST00000345724.7	2866	16	31	-1992	-3	8	multi-exon	FALSE	canonical	1	85063	junction_6	80019.08170080434	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	82	2523	30.0	31	True	NA	NA
PB.5498.1	chr18	+	2699	16	full-splice_match	MALT1	ENST00000345724.7	2866	16	44	123	10	0	multi-exon	FALSE	canonical	1	85063	junction_6	80019.08170080434	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	69	2510	25.0	44	True	NA	NA
PB.5498.7	chr18	+	4805	17	full-splice_match	MALT1	ENST00000649217.1	4950	17	7	138	7	-138	multi-exon	FALSE	canonical	1	105440	junction_1	77223.67122915988	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	173	2647	60.0	7	True	NA	NA
PB.5868.3	chr19	-	3107	2	full-splice_match	ZNF506	ENST00000590319.1	571	2	-33	-2503	-5	-1738	multi-exon	FALSE	canonical	1	1449	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	159	1265	25.0	-10	True	AATAAA	-17
PB.5498.5	chr18	+	4951	17	full-splice_match	MALT1	ENST00000649217.1	4950	17	-2	1	-2	-1	multi-exon	FALSE	canonical	1	105440	junction_1	77223.67122915988	NA	6	NA	TRUE	NA	NA	NA	C	coding	824	2475	182	2656	35.0	-2	True	NA	NA
PB.5498.4	chr18	+	3893	16	full-splice_match	MALT1	ENST00000345724.7	2866	16	40	-1067	6	719	multi-exon	FALSE	canonical	1	85063	junction_6	80019.08170080434	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	73	2514	30.0	40	True	NA	NA
PB.9622.1	chr5	+	2455	10	full-splice_match	ERGIC1	ENST00000393784.7	2881	10	-24	450	-24	-445	multi-exon	FALSE	canonical	1	810105	junction_1	396191.2984647819	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	164	1036	20.0	0	True	AATGAA	-43
PB.2876.1	chr12	-	2758	2	full-splice_match	TMEM119	ENST00000392806.3	2707	2	-56	5	-32	-5	multi-exon	FALSE	canonical	1	80016	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	283	852	226	1077	20.0	-109	False	AATAAA	-14
PB.11877.2	chr9	-	3537	3	novel_in_catalog	SURF6	novel	4447	5	NA	NA	221	801	intron_retention	FALSE	canonical	1	370809	junction_2	4895.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	46	462	35.0	10	True	AATAAA	-21
PB.7161.1	chr20	-	1417	4	full-splice_match	TMEM230	ENST00000202834.11	1472	4	11	44	-5	-44	multi-exon	FALSE	canonical	1	86006	junction_3	222714.57695794312	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	151	510	60.0	-17	True	ATTAAA	-13
PB.7161.2	chr20	-	1688	4	full-splice_match	TMEM230	ENST00000379279.6	1636	4	-56	4	-2	-4	multi-exon	FALSE	canonical	1	49808	junction_3	232239.9086581709	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	382	741	45.0	6849	False	AATAAA	-25
PB.7161.3	chr20	-	1635	4	full-splice_match	TMEM230	ENST00000379299.6	1642	4	-8	15	0	-15	multi-exon	FALSE	canonical	1	106283	junction_2	212027.30810335625	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	340	699	50.0	-13	True	AATAAA	-14
PB.280.5	chr1	+	3696	7	full-splice_match	NCDN	ENST00000373243.6	3683	7	-9	-4	7	-2	multi-exon	FALSE	canonical	1	230244	junction_1	193012.3235838122	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	444	2582	10.0	-21	True	AATAAA	-18
PB.1090.19	chr1	+	3267	12	novel_not_in_catalog	CD46	novel	3371	14	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	519762.0178727063	NA	12	2	TRUE	NA	NA	NA	C	coding	345	1038	146	1183	20.0	-44	True	AATAAA	-22
PB.455.10	chr1	+	2254	5	full-splice_match	AK4	ENST00000327299.7	6836	5	-65	4647	-65	598	multi-exon	FALSE	canonical	1	102	junction_4	14889.015279728877	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	271	942	25.0	-908	False	AATAAA	-9
PB.394.10	chr1	+	2521	1	novel_in_catalog	CMPK1	novel	2930	6	NA	NA	41312	563	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-5027	False	AATAAA	-11
PB.719.6	chr1	-	3103	7	full-splice_match	ANP32E	ENST00000583931.5	3451	7	204	144	3	-6	multi-exon	FALSE	canonical	1	780700	junction_5	150888.95244673223	NA	3	NA	TRUE	NA	NA	NA	C	coding	268	807	167	973	75.0	-1	True	AATAAA	-15
PB.10868.2	chr7	-	3499	4	full-splice_match	MTPN	ENST00000393085.3	3738	4	239	0	239	0	multi-exon	FALSE	canonical	1	1574893	junction_1	63127.277550112114	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	2	334	30.0	3690	False	AATAAA	-16
PB.10868.7	chr7	-	738	4	full-splice_match	MTPN	ENST00000393085.3	3738	4	-11	3011	-11	-313	multi-exon	FALSE	canonical	1	1574893	junction_1	63127.277550112114	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	228	584	55.0	25	True	NA	NA
PB.10868.6	chr7	-	1700	1	incomplete-splice_match	MTPN	ENST00000393085.3	3738	4	48856	0	48856	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1283	False	AATAAA	-16
PB.10868.5	chr7	-	2853	5	novel_not_in_catalog	MTPN	novel	3738	4	NA	NA	-94	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	704681.4918161609	NA	3	NA	TRUE	NA	NA	NA	C	coding	118	357	348	704	30.0	3320	False	AATAAA	-16
PB.4394.2	chr16	+	1821	15	full-splice_match	FUS	ENST00000254108.11	5119	15	29	3269	0	0	multi-exon	FALSE	canonical	1	1093603	junction_5	1525653.2012149328	NA	2	NA	TRUE	NA	NA	NA	C	coding	526	1581	77	1657	15.0	0	True	ATTAAA	-17
PB.280.6	chr1	+	4720	7	incomplete-splice_match	NCDN	ENST00000356090.8	3433	8	25	5	9	1	intron_retention	FALSE	canonical	1	177902	junction_1	239551.5536704295	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	154	1887	15.0	-3	True	AATAAA	-15
PB.5088.2	chr17	+	2163	3	full-splice_match	ATP5MC1	ENST00000513347.1	2214	3	50	1	0	-1	multi-exon	FALSE	canonical	1	309433	junction_1	417201.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	ATTAAA	-14
PB.868.1	chr1	-	613	4	full-splice_match	PFDN2	ENST00000368010.3	677	4	57	7	1	-7	multi-exon	FALSE	canonical	1	2104205	junction_3	147406.08109195798	NA	0	NA	TRUE	NA	NA	NA	A	coding	154	465	29	493	30.0	-18	True	NA	NA
PB.11674.6	chr9	-	4178	10	full-splice_match	TSTD2	ENST00000375172.6	1503	10	-44	-2631	-44	-4	multi-exon	FALSE	canonical	1	1199	junction_8	44066.53259294895	NA	2	NA	TRUE	NA	NA	NA	C	coding	290	873	924	1796	40.0	13	True	AATAAA	-18
PB.10125.13	chr6	-	3559	10	novel_in_catalog	USP45	novel	5826	18	NA	NA	-1	-1399	intron_retention	FALSE	canonical	1	20297	junction_9	28847.219665757122	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	43	1077	70.0	-6	True	NA	NA
PB.10125.12	chr6	-	1715	14	novel_in_catalog	USP45	novel	5826	18	NA	NA	0	18	combination_of_known_junctions	FALSE	canonical	1	8700	junction_1	35937.74965443512	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	38	1351	10.0	-1	True	ATTAAA	-19
PB.10125.11	chr6	-	2667	14	novel_in_catalog	USP45	novel	5826	18	NA	NA	0	970	combination_of_known_junctions	FALSE	canonical	1	8700	junction_1	35937.74965443512	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	38	1351	35.0	-1	True	AATAAA	-8
PB.10125.10	chr6	-	3377	14	novel_in_catalog	USP45	novel	5826	18	NA	NA	-7	1666	combination_of_known_junctions	FALSE	canonical	1	8700	junction_1	35937.74965443512	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	52	1365	15.0	-15	True	TATAAA	-23
PB.2696.2	chr12	+	1998	11	full-splice_match	SHMT2	ENST00000557348.5	1659	11	-89	-250	-72	0	multi-exon	FALSE	canonical	1	83795	junction_2	752229.3278151884	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	92	1633	15.0	1	True	AATAAA	-13
PB.2696.3	chr12	+	1890	12	full-splice_match	SHMT2	ENST00000414700.7	2006	12	117	-1	32	1	multi-exon	FALSE	canonical	1	140023	junction_1	566152.3804062409	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	73	1524	15.0	-9213	False	AATAAA	-14
PB.2696.1	chr12	+	1969	12	full-splice_match	SHMT2	ENST00000328923.7	2537	12	364	204	7	1	multi-exon	FALSE	canonical	1	1397981	junction_10	312796.8959277722	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	89	1603	15.0	-9725	False	AATAAA	-14
PB.2696.6	chr12	+	2124	12	novel_in_catalog	SHMT2	novel	2537	12	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	1	1532	junction_1	707230.0925545921	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	740	1546	5.0	-2	True	AATGAA	-20
PB.2696.4	chr12	+	2085	12	full-splice_match	SHMT2	ENST00000414700.7	2006	12	129	-208	44	-1	multi-exon	FALSE	canonical	1	140023	junction_1	566152.3804062409	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	61	1512	10.0	0	True	AATGAA	-15
PB.2696.5	chr12	+	2017	12	novel_in_catalog	SHMT2	novel	2537	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	79118	junction_5	682141.5880909837	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	846	1652	15.0	0	True	AATAAA	-13
PB.11674.2	chr9	-	3956	9	novel_in_catalog	TSTD2	novel	4320	10	NA	NA	-37	-1	no_combination_of_known_junctions	FALSE	canonical	1	1100	junction_5	47923.565072415055	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	147	1571	25.0	148	False	AATAAA	-21
PB.10049.21	chr6	+	3622	4	incomplete-splice_match	PTP4A1	ENST00000626021.2	2203	5	1947	-1915	1554	0	5prime_fragment	FALSE	canonical	1	893267	junction_1	458908.2380781587	NA	1	NA	TRUE	NA	NA	NA	B	coding	50	153	267	419	40.0	-3769	False	ATTAAA	-17
PB.1162.9	chr1	-	3079	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	4	1	TRUE	NA	NA	NA	C	coding	451	1356	32	1387	30.0	-1	True	NA	NA
PB.1162.8	chr1	-	3157	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-24	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	104374.27022411379	NA	3	1	TRUE	NA	NA	NA	C	coding	451	1356	44	1399	30.0	-13	True	NA	NA
PB.10856.1	chr7	-	2066	1	intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	-11	True	AATAAA	-12
PB.2982.20	chr12	-	2047	9	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	-1067	-99	any annotated donor/acceptor	FALSE	canonical	1	2621	junction_8	114365.37111319744	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1878	169	2046	55.0	-13	False	AATAGA	-27
PB.1162.1	chr1	-	2967	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-34	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	104374.27022411379	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	54	1409	25.0	-23	True	NA	NA
PB.1162.3	chr1	-	3641	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	39	1394	25.0	-8	True	NA	NA
PB.1162.2	chr1	-	3910	7	full-splice_match	SDE2	ENST00000272091.7	3975	7	-31	96	-31	-96	multi-exon	FALSE	canonical	1	199809	junction_6	44934.079403116244	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	51	1406	35.0	-20	True	NA	NA
PB.1162.5	chr1	-	3572	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-11	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	104374.27022411379	NA	8	1	TRUE	NA	NA	NA	C	coding	451	1356	31	1386	30.0	0	True	NA	NA
PB.4289.2	chr16	-	1317	4	novel_not_in_catalog	AC027130.1	novel	686	3	NA	NA	3	409	intron_retention	FALSE	canonical	1	1983	junction_2	679.3783105817324	NA	0	NA	TRUE	NA	NA	NA	B	coding	173	522	28	549	20.0	2	True	NA	NA
PB.1162.7	chr1	-	3003	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-16	-97	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	36	1391	35.0	-5	True	NA	NA
PB.1162.6	chr1	-	3529	8	novel_not_in_catalog	SDE2	novel	3975	7	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104374.27022411379	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	37	1392	30.0	-6	True	NA	NA
PB.1366.6	chr10	-	2727	20	novel_in_catalog	CUL2	novel	3903	19	NA	NA	29	408	combination_of_known_junctions	FALSE	canonical	1	5219	junction_1	128283.67929916827	NA	1	NA	TRUE	NA	NA	NA	C	coding	706	2121	180	2300	85.0	-3	True	ATTAAA	-28
PB.1366.5	chr10	-	2995	22	full-splice_match	CUL2	ENST00000374748.5	4312	22	-16	1333	-14	408	multi-exon	FALSE	canonical	1	8148	junction_21	131840.61855428133	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	331	2568	85.0	233	False	ATTAAA	-28
PB.2982.22	chr12	-	2215	8	incomplete-splice_match	CLIP1	ENST00000537178.5	5229	24	22	80032	2	-1047	3prime_fragment	FALSE	canonical	1	109019	junction_7	87265.75459047436	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	197	1708	80.0	1	True	NA	NA
PB.1366.3	chr10	-	3170	21	novel_not_in_catalog	CUL2	novel	3903	19	NA	NA	1	408	intron_retention	FALSE	canonical	1	219	junction_13	133908.64264970913	NA	7	1	TRUE	NA	NA	NA	C	coding	476	1431	1313	2743	85.0	250	False	ATTAAA	-28
PB.1366.2	chr10	-	2846	21	full-splice_match	CUL2	ENST00000374749.7	4208	21	29	1333	27	408	multi-exon	FALSE	canonical	1	75855	junction_20	105066.65787655949	NA	2	NA	TRUE	NA	NA	NA	C	coding	745	2238	182	2419	85.0	-5	True	ATTAAA	-28
PB.1366.1	chr10	-	2813	21	full-splice_match	CUL2	ENST00000374751.7	4233	21	88	1332	88	409	multi-exon	FALSE	canonical	1	110208	junction_20	100441.50990565355	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	148	2385	85.0	6	True	ATTAAA	-29
PB.1366.9	chr10	-	2149	19	incomplete-splice_match	CUL2	ENST00000626172.2	4115	20	24	5198	24	-3458	3prime_fragment	FALSE	canonical	1	110208	junction_18	99193.07636091017	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1938	212	2149	70.0	-5	True	ATTAAA	-17
PB.1366.8	chr10	-	2656	21	full-splice_match	CUL2	ENST00000374749.7	4208	21	33	1519	31	222	multi-exon	FALSE	canonical	1	75855	junction_20	105066.65787655949	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	178	2415	35.0	-1	True	ATTAAA	-22
PB.8883.1	chr4	-	3230	6	full-splice_match	SNCA	ENST00000394986.5	1420	6	146	-1956	-17	2	multi-exon	TRUE	canonical	1	96737	junction_5	640998.4869789943	NA	3	NA	TRUE	NA	NA	NA	C	coding	140	423	277	699	10.0	1310	False	AATAAA	-23
PB.8255.28	chr3	-	2137	2	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48899	-9368	any annotated donor/acceptor	FALSE	canonical	1	57432	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-3	True	ATTAAA	-19
PB.8255.26	chr3	-	3419	2	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48899	-8086	any annotated donor/acceptor	FALSE	canonical	1	57432	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-3	True	ATTAAA	-21
PB.8255.27	chr3	-	2287	2	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48901	-9368	any annotated donor/acceptor	FALSE	canonical	1	7126	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	115	348	122	469	15.0	-1	True	ATTAAA	-19
PB.8255.24	chr3	-	3665	2	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48903	-7836	any annotated donor/acceptor	FALSE	canonical	1	57432	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	1	True	CATAAA	-34
PB.8255.25	chr3	-	7631	1	novel_in_catalog	AC021660.3	novel	592	4	NA	NA	48899	-7836	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-3	True	CATAAA	-34
PB.8255.22	chr3	-	1787	3	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48899	-2966	any annotated donor/acceptor	FALSE	canonical	1	25370	junction_1	16031.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-3	True	AATATA	-16
PB.8255.23	chr3	-	6326	2	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48901	-5177	any annotated donor/acceptor	FALSE	canonical	1	57432	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.8255.20	chr3	-	2542	3	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48899	-2211	any annotated donor/acceptor	FALSE	canonical	1	25370	junction_1	16031.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-3	True	AATAAA	-17
PB.8255.21	chr3	-	1961	2	novel_not_in_catalog	AC021660.3	novel	592	4	NA	NA	48901	-2211	any annotated donor/acceptor	FALSE	canonical	1	18379	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-17
PB.3336.4	chr14	-	2945	3	novel_in_catalog	DHRS4-AS1	novel	2852	2	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	1	2704	junction_1	352.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	110	333	205	537	10.0	-13	True	NA	NA
PB.3336.5	chr14	-	2805	2	novel_not_in_catalog	DHRS4-AS1	novel	2852	2	NA	NA	-936	-9	any annotated donor/acceptor	FALSE	canonical	1	7589	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-24	False	NA	NA
PB.3336.2	chr14	-	2747	3	full-splice_match	DHRS4-AS1	ENST00000555045.1	1848	3	-17	-882	14	0	multi-exon	FALSE	canonical	1	18131	junction_2	27864.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-13	True	NA	NA
PB.9850.2	chr6	+	937	7	full-splice_match	MRPS18B	ENST00000259873.4	1532	7	138	457	4	-457	multi-exon	FALSE	canonical	1	948110	junction_1	132507.49579143312	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	20	796	65.0	7	True	NA	NA
PB.9850.1	chr6	+	1102	7	full-splice_match	MRPS18B	ENST00000259873.4	1532	7	131	299	-3	-299	multi-exon	FALSE	canonical	1	948110	junction_1	132507.49579143312	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	27	803	80.0	0	True	NA	NA
PB.3336.1	chr14	-	2519	2	full-splice_match	DHRS4-AS1	ENST00000553454.1	1492	2	454	-1481	184	-4	multi-exon	FALSE	canonical	1	18616	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.2533.2	chr12	-	1864	6	full-splice_match	AMN1	ENST00000541931.5	880	6	43	-1027	-10	-6	multi-exon	FALSE	canonical	1	21213	junction_5	77845.7563072002	NA	1	NA	TRUE	NA	NA	NA	C	coding	58	177	527	703	25.0	11	True	AATAAA	-24
PB.2533.3	chr12	-	2003	7	novel_in_catalog	AMN1	novel	2110	7	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	1	13462	junction_6	77465.06706466686	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	121	843	30.0	5	True	AATAAA	-23
PB.2533.1	chr12	-	2031	7	full-splice_match	AMN1	ENST00000281471.10	2110	7	77	2	3	-2	multi-exon	FALSE	canonical	1	51751	junction_6	66570.81662848468	NA	3	NA	TRUE	NA	NA	NA	C	coding	258	777	90	866	20.0	2	True	AATAAA	-28
PB.8529.5	chr3	-	1895	1	incomplete-splice_match	ZMAT3	ENST00000311417.6	9406	6	48819	4343	48106	2173	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.8529.4	chr3	-	3030	1	incomplete-splice_match	ZMAT3	ENST00000311417.6	9406	6	49206	2821	48493	-2821	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-19
PB.8529.6	chr3	-	2750	6	novel_not_in_catalog	ZMAT3	novel	9406	6	NA	NA	-1940	2	any annotated donor/acceptor	FALSE	canonical	1	803	junction_5	64704.21753178073	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	604	1470	100.0	-49	False	NA	NA
PB.7716.2	chr22	-	2969	4	full-splice_match	PATZ1	ENST00000351933.8	3638	4	668	1	212	-1	multi-exon	FALSE	canonical	1	172111	junction_1	111263.54104557341	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	38	1888	15.0	1009	False	ATTAAA	-15
PB.8529.3	chr3	-	3081	1	incomplete-splice_match	ZMAT3	ENST00000311417.6	9406	6	51920	56	51207	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	GATAAA	-16
PB.8529.2	chr3	-	4260	1	incomplete-splice_match	ZMAT3	ENST00000311417.6	9406	6	50749	48	50036	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	GATAAA	-24
PB.8750.10	chr4	+	1836	3	full-splice_match	RHOH	ENST00000511121.5	571	3	-81	-1184	-81	-175	multi-exon	FALSE	canonical	1	4269	junction_1	176782.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	634	1209	30.0	-5480	False	TATAAA	-22
PB.8529.9	chr3	-	2506	7	full-splice_match	ZMAT3	ENST00000432729.5	2944	7	438	0	-211	0	multi-exon	FALSE	canonical	1	13764	junction_6	65858.93844359068	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	422	1228	100.0	2393	False	NA	NA
PB.8529.8	chr3	-	2534	6	novel_in_catalog	ZMAT3	novel	9406	6	NA	NA	289	0	combination_of_known_junctions	FALSE	canonical	1	80190	junction_5	36002.506860495145	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	450	1256	100.0	2244	False	NA	NA
PB.10696.5	chr7	+	1689	11	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	13	-21902	any annotated donor/acceptor	FALSE	canonical	1	598	junction_3	354169.7667215682	NA	0	NA	TRUE	NA	NA	NA	B	coding	182	549	808	1356	0.0	1	True	AATAAA	-15
PB.11398.7	chr8	+	2585	12	novel_in_catalog	HSF1	novel	2105	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	392078	junction_8	317294.9143079707	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	1044	2195	10.0	-12	True	TATAAA	-17
PB.10478.1	chr7	-	1126	6	full-splice_match	RP9	ENST00000297157.7	1121	6	-8	3	3	-3	multi-exon	FALSE	canonical	1	103512	junction_4	97731.96416444314	NA	0	NA	TRUE	NA	NA	NA	A	coding	221	666	27	692	40.0	-1	True	AATAAA	-20
PB.179.8	chr1	-	2397	5	novel_not_in_catalog	RUNX3	novel	4340	6	NA	NA	469	-24	any annotated donor/acceptor	FALSE	canonical	1	870	junction_4	136874.26027653995	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	339	1328	95.0	1946	False	NA	NA
PB.3878.15	chr15	-	4696	34	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	0	-6398	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	73903.76545926365	NA	14	2	TRUE	NA	NA	NA	B	coding	1289	3870	75	3944	50.0	-1	True	NA	NA
PB.11093.3	chr8	-	2116	7	full-splice_match	PLPP5	ENST00000424479.6	2130	7	7	7	-6	1	multi-exon	FALSE	canonical	1	179608	junction_1	86927.12372521531	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	15	809	45.0	0	True	AGTAAA	-12
PB.11574.1	chr9	+	1798	1	novel_in_catalog	LINC01410	novel	2877	5	NA	NA	9610	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-11
PB.5032.3	chr17	-	3524	25	full-splice_match	HDAC5	ENST00000336057.9	5040	25	-25	1541	-5	-1	multi-exon	FALSE	canonical	1	5394	junction_11	193921.7819223942	NA	2	1	TRUE	NA	NA	NA	C	coding	1037	3114	330	3443	15.0	-6	True	ATTAAA	-21
PB.5032.2	chr17	-	3776	27	novel_not_in_catalog	HDAC5	novel	5326	27	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	canonical	1	41243	junction_19	183569.0159754829	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	342	3695	15.0	-18	True	ATTAAA	-21
PB.5032.1	chr17	-	3771	27	novel_in_catalog	HDAC5	novel	5326	27	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	107817	junction_25	167491.79538801825	NA	0	NA	TRUE	NA	NA	NA	C	coding	1122	3369	322	3690	15.0	2	True	ATTAAA	-21
PB.5032.7	chr17	-	3944	20	incomplete-splice_match	HDAC5	ENST00000225983.10	5326	27	-22	4851	-22	0	3prime_fragment	FALSE	canonical	1	112815	junction_18	166113.8019432758	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	347	2995	95.0	-23	True	NA	NA
PB.5032.6	chr17	-	3069	24	novel_not_in_catalog	HDAC5	novel	5326	27	NA	NA	12	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	163061.767107612	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	653	2989	20.0	-1	True	ATTAAA	-20
PB.5032.5	chr17	-	3561	26	novel_in_catalog	HDAC5	novel	5326	27	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	1954	junction_25	166087.3791265116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	140	3481	20.0	0	True	ATTAAA	-20
PB.5032.8	chr17	-	3122	14	incomplete-splice_match	HDAC5	ENST00000336057.9	5040	25	-19	9069	1	2625	3prime_fragment	FALSE	canonical	1	107817	junction_12	120187.61710911346	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	324	2474	85.0	0	True	NA	NA
PB.5191.1	chr17	-	1857	5	full-splice_match	AMZ2P1	ENST00000430983.5	3425	5	5	1563	5	-75	multi-exon	FALSE	canonical	1	66181	junction_4	46173.406623158095	NA	0	NA	TRUE	NA	NA	NA	A	coding	119	360	1010	1369	35.0	2	True	AATAAA	-27
PB.6697.8	chr2	+	4120	16	full-splice_match	POLR1B	ENST00000333990.10	4376	16	254	2	-7	2	multi-exon	FALSE	canonical	1	4787	junction_1	75140.52406033792	NA	0	NA	TRUE	NA	NA	NA	C	coding	996	2991	562	3552	10.0	-22	True	NA	NA
PB.6979.4	chr2	+	9711	41	novel_in_catalog	PIKFYVE	novel	2039	10	NA	NA	-7	-29	combination_of_known_junctions	FALSE	canonical	1	45265	junction_11	66602.12020529076	NA	2	NA	TRUE	NA	NA	NA	C	coding	2042	6129	166	6294	55.0	5	True	AATAAA	-9
PB.6979.5	chr2	+	9291	38	novel_in_catalog	PIKFYVE	novel	2039	10	NA	NA	-5	-6	no_combination_of_known_junctions	FALSE	canonical	1	8335	junction_2	69982.15956715669	NA	29	NA	TRUE	NA	NA	NA	C	coding	1895	5688	164	5851	25.0	7	True	AATAAA	-32
PB.6979.6	chr2	+	9603	40	novel_in_catalog	PIKFYVE	novel	2039	10	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	1	13724	junction_3	68039.13439168101	NA	1	NA	TRUE	NA	NA	NA	C	coding	2001	6006	158	6163	25.0	13	True	AATAAA	-32
PB.725.1	chr1	+	1819	10	full-splice_match	ECM1	ENST00000369047.8	2070	10	22	229	0	0	multi-exon	FALSE	canonical	1	274572	junction_1	141582.90003918612	NA	0	NA	TRUE	NA	NA	NA	A	coding	540	1623	104	1726	20.0	-2	True	ACTAAA	-17
PB.6979.1	chr2	+	9927	42	full-splice_match	PIKFYVE	ENST00000264380.8	9901	42	-32	6	-32	-6	multi-exon	FALSE	canonical	1	56148	junction_1	65555.23643779519	NA	2	NA	TRUE	NA	NA	NA	C	coding	2098	6297	191	6487	25.0	1	True	AATAAA	-32
PB.6979.2	chr2	+	2350	12	full-splice_match	PIKFYVE	ENST00000407449.5	1898	12	-35	-417	-24	-4	multi-exon	FALSE	canonical	1	56148	junction_1	29966.108719988686	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	183	1829	40.0	-12	True	ATTAAA	-20
PB.6979.3	chr2	+	2855	9	incomplete-splice_match	PIKFYVE	ENST00000407449.5	1898	12	-20	2554	-9	-6	intron_retention	FALSE	canonical	1	56148	junction_1	27791.65127532682	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	168	1514	75.0	3	True	TTTAAA	-12
PB.10127.19	chr6	-	3769	21	incomplete-splice_match	ASCC3	ENST00000369162.6	8146	42	0	139086	0	8	3prime_fragment	FALSE	canonical	1	125717	junction_10	54427.90027834989	NA	0	NA	TRUE	NA	NA	NA	C	coding	1141	3423	346	3768	50.0	-36	True	NA	NA
PB.9826.1	chr6	-	4421	3	novel_not_in_catalog	ZSCAN23	novel	1316	4	NA	NA	10	10353	any annotated donor/acceptor	FALSE	canonical	1	6959	junction_2	17801.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	104	315	434	748	20.0	-13	True	NA	NA
PB.8721.2	chr4	+	2802	13	full-splice_match	ZCCHC4	ENST00000302874.8	2785	13	-14	-3	-13	3	multi-exon	FALSE	canonical	1	73587	junction_6	15521.238736316192	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	39	1580	5.0	-2	True	NA	NA
PB.10127.15	chr6	-	7416	41	novel_in_catalog	ASCC3	novel	8146	42	NA	NA	7	482	no_combination_of_known_junctions	FALSE	canonical	1	3029	junction_31	70096.96616635771	NA	1	NA	TRUE	NA	NA	NA	C	coding	2147	6444	323	6766	40.0	-13	True	AATAAA	-18
PB.10127.16	chr6	-	7554	43	novel_not_in_catalog	ASCC3	novel	8146	42	NA	NA	1	482	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	72148.31617656744	NA	18	3	TRUE	NA	NA	NA	C	coding	2145	6438	345	6782	40.0	-35	True	AATAAA	-18
PB.11667.1	chr9	-	3714	5	full-splice_match	ZNF367	ENST00000375256.4	3646	5	-72	4	-72	-4	multi-exon	FALSE	canonical	1	56461	junction_4	39668.18518662027	NA	0	NA	TRUE	NA	NA	NA	A	coding	342	1029	394	1422	45.0	-13	True	AATAAA	-16
PB.2820.19	chr12	-	3282	17	full-splice_match	CDK17	ENST00000261211.7	4157	17	106	769	26	-769	multi-exon	FALSE	canonical	1	133606	junction_16	59055.90025715969	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	499	2070	30.0	-16	True	TATAAA	-18
PB.2820.18	chr12	-	3435	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	326	-297	any annotated donor/acceptor	FALSE	canonical	1	482	junction_16	84285.39765969159	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	180	1751	30.0	813	False	NA	NA
PB.6649.2	chr2	-	2964	16	full-splice_match	MGAT4A	ENST00000393487.5	8382	16	31	5387	-2	1012	multi-exon	FALSE	canonical	1	35402	junction_15	32929.97666335172	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	284	1891	35.0	15	True	AATATA	-12
PB.6649.3	chr2	-	1990	16	full-splice_match	MGAT4A	ENST00000393487.5	8382	16	-6	6398	-6	1	multi-exon	FALSE	canonical	1	35402	junction_15	32929.97666335172	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	321	1928	15.0	-22	True	ATTAAA	-16
PB.6649.1	chr2	-	4257	16	novel_in_catalog	MGAT4A	novel	8432	15	NA	NA	-8	-44	combination_of_known_junctions	FALSE	canonical	1	2762	junction_1	45095.02459158388	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	323	1978	30.0	-24	True	AATAAA	-15
PB.2820.13	chr12	-	4463	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	-19	-297	intron_retention	FALSE	canonical	1	2116	junction_13	110883.90028297545	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	986	2251	30.0	-18	True	NA	NA
PB.2820.10	chr12	-	6018	15	novel_in_catalog	CDK17	novel	4157	17	NA	NA	-6	-296	intron_retention	FALSE	canonical	1	133606	junction_14	60321.82714699581	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	611	2152	30.0	-5	True	NA	NA
PB.2820.17	chr12	-	3469	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	-112	-297	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	105737.72860294179	NA	36	1	TRUE	NA	NA	NA	C	coding	347	1044	213	1256	30.0	1045	False	NA	NA
PB.7625.5	chr22	+	3081	6	novel_not_in_catalog	ZNF74	novel	3159	5	NA	NA	-7	945	intron_retention	FALSE	non_canonical	0	0	junction_5	40922.69743992935	NA	2	1	TRUE	NA	NA	NA	C	coding	644	1935	449	2383	15.0	7	True	NA	NA
PB.2820.15	chr12	-	3828	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	-30	-297	any annotated donor/acceptor	FALSE	canonical	1	1359	junction_15	91315.8669238736	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	750	2144	30.0	-29	True	NA	NA
PB.2820.14	chr12	-	3893	17	novel_not_in_catalog	CDK17	novel	4157	17	NA	NA	-12	-297	any annotated donor/acceptor	FALSE	canonical	1	1129	junction_9	88824.15212865811	NA	12	NA	TRUE	NA	NA	NA	C	coding	530	1593	617	2209	30.0	-11	True	NA	NA
PB.7625.4	chr22	+	3034	4	full-splice_match	ZNF74	ENST00000403682.7	2789	4	28	-273	-5	0	multi-exon	FALSE	canonical	1	21962	junction_1	40726.11965584522	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	601	2322	30.0	3	True	AATAAA	-19
PB.11249.1	chr8	-	2538	7	novel_not_in_catalog	C8orf37	novel	3334	6	NA	NA	0	-46	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	17033.919214483656	NA	2	1	TRUE	NA	NA	NA	A	coding	207	624	13	636	20.0	-1	True	AATAAA	-13
PB.7616.3	chr22	-	1940	11	novel_not_in_catalog	TXNRD2	novel	2025	18	NA	NA	-11	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	127082.23715692922	NA	3	1	TRUE	NA	NA	NA	B	coding	218	657	38	694	15.0	-14	True	NA	NA
PB.4861.12	chr17	-	2609	3	full-splice_match	FAM222B	ENST00000582266.5	2613	3	-18	22	-10	-9	multi-exon	FALSE	canonical	1	37066	junction_1	1972.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	434	1738	85.0	-20	True	NA	NA
PB.7625.3	chr22	+	2837	5	full-splice_match	ZNF74	ENST00000400451.6	3159	5	37	285	-9	0	multi-exon	FALSE	canonical	1	47976	junction_1	28636.56956039777	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	478	2412	60.0	-1	True	NA	NA
PB.4861.10	chr17	-	2663	4	full-splice_match	FAM222B	ENST00000577682.5	549	4	-23	-2091	10	0	multi-exon	FALSE	canonical	1	18906	junction_2	7595.982329860672	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	479	1783	70.0	-31	True	ATTAAA	-7
PB.7001.10	chr2	+	1440	3	incomplete-splice_match	ARPC2	ENST00000465395.5	816	5	-266	9409	-5	483	3prime_fragment	FALSE	canonical	1	3027365	junction_1	257133.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	283	621	65.0	0	True	NA	NA
PB.10992.7	chr8	+	1732	11	full-splice_match	TUSC3	ENST00000503731.5	1498	11	-30	-204	20	2	multi-exon	FALSE	canonical	1	169740	junction_10	240567.53734369483	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	179	1225	25.0	-10	False	ATTAAA	-37
PB.3908.14	chr15	-	4282	37	incomplete-splice_match	VPS13C	ENST00000395898.3	11012	80	-20	84219	5	-103	3prime_fragment	FALSE	canonical	1	137715	junction_11	35162.12627175179	NA	0	NA	TRUE	NA	NA	NA	C	coding	1396	4188	95	4282	70.0	-1	True	NA	NA
PB.10473.1	chr7	-	2176	5	full-splice_match	LSM5	ENST00000450169.6	2258	5	-14	96	-14	-96	multi-exon	FALSE	canonical	1	1248898	junction_4	123936.37148351569	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	4850	False	NA	NA
PB.9058.16	chr4	-	3129	22	novel_not_in_catalog	DDX60	novel	6071	38	NA	NA	52	-5250	any annotated donor/acceptor	FALSE	canonical	1	1012	junction_21	36836.01620887619	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2811	317	3127	70.0	-1	True	NA	NA
PB.11093.6	chr8	-	3461	4	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-4	0	intron_retention	FALSE	canonical	1	179608	junction_1	72047.5342457248	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	1682	2155	50.0	-11	True	AGTAAA	-11
PB.3673.1	chr14	+	2716	8	novel_not_in_catalog	ZNF839	novel	2971	8	NA	NA	2339	1	any annotated donor/acceptor	FALSE	canonical	1	389	junction_1	44578.552972276266	NA	2	1	TRUE	NA	NA	NA	A	coding	811	2436	92	2527	15.0	2551	False	TATAAA	-19
PB.6655.1	chr2	-	2725	15	novel_not_in_catalog	AFF3	novel	9849	23	NA	NA	33	-28595	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	28157.565204576906	NA	0	NA	TRUE	NA	NA	NA	A	coding	866	2598	126	2723	80.0	70	False	NA	NA
PB.9058.15	chr4	-	3082	21	incomplete-splice_match	DDX60	ENST00000393743.7	6071	38	26	51661	23	-5247	3prime_fragment	FALSE	canonical	1	52704	junction_20	23684.36903022751	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2814	267	3080	60.0	17	True	NA	NA
PB.9058.14	chr4	-	3843	27	novel_not_in_catalog	DDX60	novel	6071	38	NA	NA	53	-3166	any annotated donor/acceptor	FALSE	canonical	1	1012	junction_26	35008.6971675163	NA	0	NA	TRUE	NA	NA	NA	C	coding	1176	3528	316	3843	65.0	0	True	GATAAA	-37
PB.11255.2	chr8	-	3142	2	intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5354	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	coding	417	1254	63	1316	40.0	-1	True	AATAAA	-17
PB.10992.6	chr8	+	2856	10	novel_not_in_catalog	TUSC3	novel	731	6	NA	NA	20	25	any annotated donor/acceptor	FALSE	canonical	1	540	junction_9	263972.1858933879	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	179	1231	25.0	-10	False	AATAAA	-17
PB.9058.12	chr4	-	4003	28	incomplete-splice_match	DDX60	ENST00000393743.7	6071	38	28	34780	25	1501	3prime_fragment	FALSE	canonical	1	52704	junction_27	26389.60456672151	NA	0	NA	TRUE	NA	NA	NA	C	coding	1246	3738	265	4002	55.0	19	True	AGTAAA	-6
PB.11093.7	chr8	-	2972	5	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	3	0	intron_retention	FALSE	canonical	1	179608	junction_1	94518.66571575955	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	1268	1666	50.0	-27	False	AGTAAA	-11
PB.10634.1	chr7	+	2648	8	full-splice_match	RSBN1L	ENST00000334955.12	6422	8	-10	3784	-10	420	multi-exon	FALSE	canonical	1	149373	junction_1	36542.30710409232	NA	0	NA	TRUE	NA	NA	NA	A	coding	846	2541	38	2578	25.0	-26	True	AATAAA	-20
PB.10761.1	chr7	+	2544	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	13	-85	0	85	multi-exon	FALSE	canonical	1	810846	junction_1	220709.79580775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	26	1495	60.0	-13	True	AATAAA	-16
PB.10761.3	chr7	+	3841	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	13	-1382	0	1382	multi-exon	FALSE	canonical	1	810846	junction_1	220709.79580775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	26	1495	20.0	-13	True	AATAAA	-21
PB.10761.2	chr7	+	1584	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	20	868	7	2	multi-exon	FALSE	canonical	1	810846	junction_1	220709.79580775293	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	19	1488	35.0	-6	True	AATAAA	-34
PB.10761.5	chr7	+	1784	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	13	675	0	145	multi-exon	TRUE	canonical	1	810846	junction_1	220709.79580775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	26	1495	25.0	-13	True	TATAAA	-15
PB.10761.4	chr7	+	5598	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	13	-3139	0	3139	multi-exon	FALSE	canonical	1	810846	junction_1	220709.79580775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	26	1495	40.0	-13	True	AATAAA	-29
PB.10761.7	chr7	+	1849	12	full-splice_match	PMPCB	ENST00000428154.5	1714	12	7	-142	7	142	multi-exon	FALSE	canonical	1	810846	junction_1	223446.20598289146	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	19	1491	35.0	-6	True	TATAAA	-12
PB.7730.1	chr22	+	2711	1	antisense	novelGene_LARGE1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.10761.9	chr7	+	1512	13	full-splice_match	PMPCB	ENST00000249269.8	2472	13	29	931	-2	-8	multi-exon	FALSE	canonical	1	810846	junction_1	220709.79580775293	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	10	1479	50.0	3	True	ATTAAA	-33
PB.10761.8	chr7	+	1699	12	full-splice_match	PMPCB	ENST00000428154.5	1714	12	12	3	-6	-3	multi-exon	FALSE	canonical	1	810846	junction_1	223446.20598289146	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	14	1486	25.0	-1	True	ATTAAA	-42
PB.10992.1	chr8	+	2899	10	full-splice_match	TUSC3	ENST00000382020.8	3683	10	40	744	-16	-744	multi-exon	FALSE	canonical	1	394118	junction_1	166924.7619308002	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	169	1212	20.0	0	True	ATTAAA	-14
PB.1384.3	chr10	+	2652	5	full-splice_match	ZNF485	ENST00000361807.7	2054	5	34	-632	15	632	multi-exon	FALSE	canonical	1	24147	junction_2	12928.528191078054	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	161	1486	100.0	0	True	NA	NA
PB.1384.2	chr10	+	2362	6	novel_not_in_catalog	ZNF485	novel	2054	5	NA	NA	13	632	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	19411.01232393612	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	163	1488	100.0	-2	True	NA	NA
PB.1384.1	chr10	+	2033	5	full-splice_match	ZNF485	ENST00000361807.7	2054	5	21	0	2	0	multi-exon	FALSE	canonical	1	24147	junction_2	12928.528191078054	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	174	1499	10.0	-13	True	AATAAA	-17
PB.10111.2	chr6	-	2241	11	novel_not_in_catalog	MDN1	novel	18413	102	NA	NA	-9887	-31608	any annotated donor/acceptor	FALSE	canonical	1	6344	junction_9	49100.66881418216	NA	0	NA	TRUE	NA	NA	NA	B	coding	502	1509	322	1830	90.0	7	True	NA	NA
PB.6445.34	chr2	-	2928	15	full-splice_match	PREPL	ENST00000410081.5	3080	15	247	-95	2	0	multi-exon	FALSE	canonical	1	26317	junction_14	201018.68097899685	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	216	2399	35.0	1	True	AATAAA	-23
PB.10111.1	chr6	-	6361	35	incomplete-splice_match	MDN1	ENST00000629399.2	17400	102	-78	86187	-78	19524	3prime_fragment	FALSE	canonical	1	76520	junction_34	23036.737273054016	NA	1	NA	TRUE	NA	NA	NA	B	coding	1718	5157	195	5351	100.0	-59	True	AATAAA	-37
PB.11093.4	chr8	-	4416	3	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-4	0	intron_retention	FALSE	canonical	1	179608	junction_1	40578.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	106	321	26	346	50.0	-11	True	AGTAAA	-11
PB.6445.35	chr2	-	2774	15	novel_not_in_catalog	PREPL	novel	5657	15	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	4586	junction_14	204584.6033720973	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	329	2245	35.0	1	True	AATAAA	-23
PB.6434.11	chr2	+	2642	4	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	11	-16	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	159302.87822467825	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	249	668	90.0	11	True	AATAAA	-34
PB.6445.36	chr2	-	2628	14	full-splice_match	PREPL	ENST00000409411.5	4725	14	33	2064	-19	0	multi-exon	FALSE	canonical	1	207717	junction_13	146171.0196055721	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	183	2099	35.0	2	True	AATAAA	-23
PB.6552.2	chr2	-	2757	1	incomplete-splice_match	FBXO41	ENST00000295133.9	6928	12	12184	8	9358	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	112	339	698	1036	30.0	9314	False	AATAAA	-20
PB.10072.5	chr6	-	2299	4	novel_in_catalog	HMGN3	novel	872	6	NA	NA	7	-301	intron_retention	FALSE	canonical	1	692126	junction_2	177806.54163631515	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	1024	1398	20.0	-1	True	AATATA	-15
PB.11398.9	chr8	+	2059	12	novel_not_in_catalog	HSF1	novel	2105	13	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	3967	junction_10	436164.2772303054	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	720	1670	10.0	-9	True	TATAAA	-16
PB.8461.40	chr3	-	1965	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	12859	junction_6	185930.3763524281	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	205	1407	10.0	-1	True	AGTAAA	-36
PB.145.42	chr1	-	2903	5	full-splice_match	HP1BP3	ENST00000375000.5	928	5	-12	-1963	0	-105	multi-exon	FALSE	canonical	1	43382	junction_4	518202.2275041376	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	240	641	0.0	-1	True	AATAAA	-23
PB.6445.31	chr2	-	3826	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	15	0	intron_retention	FALSE	canonical	1	4470	junction_14	204603.88225858696	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	1114	3297	35.0	273	False	AATAAA	-23
PB.9036.3	chr4	-	1729	11	incomplete-splice_match	MAP9	ENST00000311277.8	7333	14	15	10583	15	12	3prime_fragment	FALSE	canonical	1	35416	junction_10	30626.375714569953	NA	0	NA	TRUE	NA	NA	NA	B	coding	493	1479	250	1728	80.0	9	True	AAAAAG	-8
PB.9036.2	chr4	-	1831	13	novel_in_catalog	MAP9	novel	7333	14	NA	NA	-10	-16	combination_of_known_junctions	FALSE	canonical	1	35416	junction_12	31247.396120405865	NA	0	NA	TRUE	NA	NA	NA	B	coding	571	1713	118	1830	80.0	-17	True	AAAAAG	-17
PB.6445.33	chr2	-	3219	15	full-splice_match	PREPL	ENST00000409936.5	5212	15	-68	2061	-1	0	multi-exon	FALSE	canonical	1	15460	junction_14	202788.7788815883	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	507	2690	35.0	-2	True	AATAAA	-23
PB.4949.3	chr17	+	5986	14	novel_in_catalog	CDK12	novel	4165	13	NA	NA	-25	-204	combination_of_known_junctions	FALSE	canonical	1	57336	junction_1	88388.82971381347	NA	2	NA	TRUE	NA	NA	NA	C	coding	1480	4443	587	5029	20.0	-22	True	AATAAA	-22
PB.4949.2	chr17	+	6788	14	full-splice_match	CDK12	ENST00000430627.6	5918	14	-275	-595	-25	595	multi-exon	FALSE	canonical	1	86665	junction_13	69251.91600442563	NA	1	NA	TRUE	NA	NA	NA	C	coding	1481	4446	587	5032	70.0	-22	True	AATAAA	-29
PB.4949.1	chr17	+	4827	13	incomplete-splice_match	CDK12	ENST00000430627.6	5918	14	-275	5680	-25	634	3prime_fragment	FALSE	canonical	1	197689	junction_1	45537.555311446566	NA	1	NA	TRUE	NA	NA	NA	C	coding	1262	3789	587	4375	45.0	-22	True	AATAAA	-21
PB.4949.7	chr17	+	6001	14	full-splice_match	CDK12	ENST00000447079.4	8336	14	-539	2874	-11	-205	multi-exon	FALSE	canonical	1	103259	junction_13	65883.57769293727	NA	1	NA	TRUE	NA	NA	NA	C	coding	1490	4473	573	5045	20.0	-8	True	AATAAA	-21
PB.4949.6	chr17	+	6807	14	full-splice_match	CDK12	ENST00000447079.4	8336	14	-543	2072	-15	597	multi-exon	FALSE	canonical	1	103259	junction_13	65883.57769293727	NA	1	NA	TRUE	NA	NA	NA	C	coding	1490	4473	577	5049	75.0	-12	True	AATAAA	-31
PB.4949.5	chr17	+	2799	2	novel_not_in_catalog	CDK12	novel	4165	13	NA	NA	-16	-28385	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	349	1050	578	1627	90.0	-13	True	NA	NA
PB.4949.4	chr17	+	5628	15	novel_not_in_catalog	CDK12	novel	4165	13	NA	NA	-25	-204	any annotated donor/acceptor	FALSE	canonical	1	2051	junction_1	94510.34322039972	NA	4	NA	TRUE	NA	NA	NA	C	coding	1490	4473	199	4671	20.0	-22	True	AATAAA	-22
PB.9195.3	chr5	-	4028	5	full-splice_match	TTC33	ENST00000337702.4	2612	5	15	-1431	0	1431	multi-exon	FALSE	canonical	1	144515	junction_4	25368.78784057291	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	139	927	30.0	-44	True	AATAAA	-17
PB.9195.2	chr5	-	5487	5	full-splice_match	TTC33	ENST00000337702.4	2612	5	22	-2897	-4	2897	multi-exon	FALSE	canonical	1	144515	junction_4	25368.78784057291	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	132	920	30.0	-37	True	NA	NA
PB.4949.9	chr17	+	7270	14	full-splice_match	CDK12	ENST00000447079.4	8336	14	-531	1597	-3	1072	multi-exon	FALSE	canonical	1	103259	junction_13	65883.57769293727	NA	1	NA	TRUE	NA	NA	NA	C	coding	1490	4473	565	5037	25.0	0	True	AATAAA	-22
PB.4949.8	chr17	+	7248	14	full-splice_match	CDK12	ENST00000430627.6	5918	14	-258	-1072	-8	1072	multi-exon	FALSE	canonical	1	86665	junction_13	69251.91600442563	NA	6	NA	TRUE	NA	NA	NA	C	coding	1481	4446	570	5015	25.0	-5	True	AATAAA	-22
PB.9195.7	chr5	-	2478	5	full-splice_match	TTC33	ENST00000337702.4	2612	5	31	103	1	-103	multi-exon	FALSE	canonical	1	144515	junction_4	25368.78784057291	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	123	911	45.0	-28	True	AATAAA	-18
PB.9195.6	chr5	-	2380	3	full-splice_match	TTC33	ENST00000503936.6	1707	3	-17	-656	1	-5	multi-exon	FALSE	canonical	1	5489	junction_1	69513.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	80	243	141	383	20.0	-46	True	AATAAA	-11
PB.9195.5	chr5	-	2473	4	full-splice_match	TTC33	ENST00000511730.2	784	4	-20	-1669	6	-1	multi-exon	FALSE	canonical	1	6084	junction_1	79915.42126662552	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	148	804	25.0	-53	True	AATAAA	-15
PB.9195.4	chr5	-	2560	5	full-splice_match	TTC33	ENST00000337702.4	2612	5	56	-4	-11	4	multi-exon	FALSE	canonical	1	144515	junction_4	25368.78784057291	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	98	886	25.0	-3	True	AATAAA	-20
PB.4562.2	chr16	+	3937	2	incomplete-splice_match	TERF2IP	ENST00000300086.4	2118	3	-11	1	-11	-1	intron_retention	FALSE	canonical	1	895357	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	121	912	25.0	-16	True	AATAAA	-17
PB.4562.3	chr16	+	1720	3	full-splice_match	TERF2IP	ENST00000300086.4	2118	3	406	-8	-204	8	multi-exon	FALSE	canonical	1	873137	junction_2	11110.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	190	891	30.0	-11	True	AATAAA	-26
PB.9008.14	chr4	+	3465	17	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	-4	-21	no_combination_of_known_junctions	FALSE	canonical	1	4306	junction_11	186327.31006513612	NA	8	1	TRUE	NA	NA	NA	C	coding	579	1740	141	1880	20.0	-7	True	AATAAA	-13
PB.4562.1	chr16	+	1355	3	full-splice_match	TERF2IP	ENST00000300086.4	2118	3	-42	805	-42	194	multi-exon	FALSE	canonical	1	873137	junction_2	11110.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	395	1188	152	1339	60.0	7	True	AAGAAA	-20
PB.7189.6	chr20	+	2398	5	novel_in_catalog	ZNF133	novel	2245	2	NA	NA	12	-1	no_combination_of_known_junctions	FALSE	canonical	1	3973	junction_1	38660.3868643344	NA	2	NA	TRUE	NA	NA	NA	C	coding	654	1965	257	2221	10.0	2076	False	AATAAA	-22
PB.9008.13	chr4	+	2266	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	372	1283	-7	253	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	144	1943	15.0	-10	True	NA	NA
PB.4562.4	chr16	+	3262	1	novel_in_catalog	TERF2IP	novel	2118	3	NA	NA	23	-5363	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	263	792	87	878	75.0	-9	True	NA	NA
PB.7189.5	chr20	+	2810	8	novel_in_catalog	ZNF133	novel	2245	2	NA	NA	-15	0	no_combination_of_known_junctions	FALSE	canonical	1	2482	junction_2	32867.26729419035	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	668	2632	15.0	18	True	AATAAA	-23
PB.6445.38	chr2	-	2775	14	full-splice_match	PREPL	ENST00000541738.5	6049	14	57	3217	0	-1	multi-exon	FALSE	canonical	1	57369	junction_13	174037.1216592707	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	331	2247	35.0	-1	True	AATAAA	-22
PB.1130.2	chr1	-	2416	9	novel_in_catalog	BPNT1	novel	2379	8	NA	NA	-3	-66	intron_retention	FALSE	canonical	1	32617	junction_8	128721.97063772514	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	196	1122	25.0	-43	True	ATTAAA	-15
PB.1130.3	chr1	-	2191	9	full-splice_match	BPNT1	ENST00000322067.11	2465	9	29	245	3	4	multi-exon	FALSE	canonical	1	251573	junction_5	71572.12311673799	NA	5	NA	TRUE	NA	NA	NA	C	coding	308	927	148	1074	15.0	-37	True	AATAAA	-15
PB.1130.4	chr1	-	2122	8	full-splice_match	BPNT1	ENST00000544404.5	2379	8	12	245	-8	4	multi-exon	FALSE	canonical	1	3726	junction_7	138570.10853038417	NA	4	NA	TRUE	NA	NA	NA	C	coding	253	762	244	1005	15.0	-54	True	AATAAA	-15
PB.1007.2	chr1	+	3233	1	novel_in_catalog	RGS2	novel	1354	5	NA	NA	0	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-23
PB.9008.18	chr4	+	2412	18	full-splice_match	ABCE1	ENST00000296577.8	3921	18	379	1130	0	406	multi-exon	FALSE	canonical	1	18466	junction_16	174936.66920146	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	137	1936	10.0	-3	True	AATAAA	-17
PB.6445.39	chr2	-	2890	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	4001	junction_14	204681.85473201016	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	179	2362	35.0	1	True	AATAAA	-22
PB.10105.9	chr6	-	3271	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	-26	1045	-26	-1045	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	306	1262	65.0	14	True	NA	NA
PB.10105.8	chr6	-	3656	7	novel_in_catalog	UBE2J1	novel	4290	8	NA	NA	-10	-524	no_combination_of_known_junctions	FALSE	canonical	1	24731	junction_1	425868.482694449	NA	4	NA	TRUE	NA	NA	NA	C	coding	278	837	290	1126	35.0	30	True	AATAAA	-6
PB.11602.2	chr9	+	3822	4	full-splice_match	C9orf85	ENST00000377031.7	1107	4	82	-2797	-14	-7	multi-exon	FALSE	canonical	1	1955	junction_3	48254.47852329932	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	109	648	65.0	-12	True	NA	NA
PB.10105.1	chr6	-	5035	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	88	-833	88	833	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	192	1148	90.0	-1	True	NA	NA
PB.10105.3	chr6	-	4165	7	novel_in_catalog	UBE2J1	novel	4290	8	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	24731	junction_1	425868.482694449	NA	1	1	TRUE	NA	NA	NA	C	coding	278	837	276	1112	25.0	330	False	NA	NA
PB.10105.2	chr6	-	4362	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	-73	1	-73	-1	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	353	1309	25.0	253	False	NA	NA
PB.10105.5	chr6	-	3867	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	10	413	10	-413	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	270	1226	30.0	-9	True	AATGAA	-29
PB.10105.7	chr6	-	3677	8	novel_not_in_catalog	UBE2J1	novel	4290	8	NA	NA	123	-520	any annotated donor/acceptor	FALSE	canonical	1	25064	junction_1	405001.3521719428	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	157	864	20.0	-4	True	AATAAA	-10
PB.10105.6	chr6	-	4122	8	full-splice_match	UBE2J1	ENST00000435041.2	4290	8	-349	517	-349	-517	multi-exon	FALSE	canonical	1	652326	junction_7	203276.72203141396	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	629	1585	20.0	-23	False	AATAAA	-13
PB.507.1	chr1	-	3376	4	full-splice_match	C1orf52	ENST00000294661.8	3391	4	17	-2	-13	2	multi-exon	FALSE	canonical	1	163616	junction_2	109867.52122240474	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	23	325	10.0	-2	True	NA	NA
PB.4545.1	chr16	-	2684	1	incomplete-splice_match	ZFHX3	ENST00000268489.9	16064	10	262786	21	104245	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	1965	False	NA	NA
PB.507.3	chr1	-	1378	4	full-splice_match	C1orf52	ENST00000294661.8	3391	4	0	2013	0	2	multi-exon	FALSE	canonical	1	163616	junction_2	109867.52122240474	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	40	342	20.0	-19	True	NA	NA
PB.8490.3	chr3	-	3106	7	incomplete-splice_match	VEPH1	ENST00000392833.6	3979	13	121707	3	41	-3	5prime_fragment	FALSE	canonical	1	1982	junction_3	11772.764068202316	NA	0	NA	TRUE	NA	NA	NA	B	coding	470	1413	305	1717	25.0	NA	False	NA	NA
PB.2200.1	chr11	+	2670	12	novel_in_catalog	ANKRD42	novel	4066	6	NA	NA	-22	-6	combination_of_known_junctions	FALSE	canonical	1	29890	junction_11	30275.783786184107	NA	11	NA	TRUE	NA	NA	NA	C	coding	518	1557	955	2511	35.0	5	True	ATTAAA	-19
PB.3107.1	chr13	+	1772	9	full-splice_match	CCNA1	ENST00000255465.6	1879	9	93	14	-72	-1	multi-exon	FALSE	canonical	1	58572	junction_1	38957.012420543426	NA	0	NA	TRUE	NA	NA	NA	A	coding	457	1374	196	1569	25.0	-44	False	AATAAA	-14
PB.11600.4	chr9	-	6326	24	full-splice_match	CEMIP2	ENST00000377044.8	6523	24	-9	206	-9	-1	multi-exon	FALSE	canonical	1	133880	junction_22	66557.69383455731	NA	3	NA	TRUE	NA	NA	NA	C	coding	1383	4152	550	4701	25.0	-2	True	ATTAAA	-17
PB.11600.6	chr9	-	5222	24	full-splice_match	CEMIP2	ENST00000377044.8	6523	24	361	940	-10	-321	multi-exon	FALSE	canonical	1	133880	junction_22	66557.69383455731	NA	1	NA	TRUE	NA	NA	NA	C	coding	1383	4152	180	4331	10.0	942	False	NA	NA
PB.11600.7	chr9	-	2804	1	novel_in_catalog	CEMIP2	novel	533	3	NA	NA	-6	-15768	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	167	504	1	504	90.0	1	True	NA	NA
PB.416.6	chr1	+	2354	6	novel_not_in_catalog	CPT2	novel	3094	5	NA	NA	7	77	intron_retention	FALSE	non_canonical	0	0	junction_1	82094.84295715536	NA	3	1	TRUE	NA	NA	NA	C	coding	658	1977	50	2026	90.0	3	True	NA	NA
PB.416.5	chr1	+	2696	5	full-splice_match	CPT2	ENST00000371486.3	3094	5	396	2	5	-2	multi-exon	FALSE	canonical	1	180192	junction_2	17562.932263363655	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	120	2096	25.0	1	True	AATAAA	-17
PB.416.4	chr1	+	2430	5	full-splice_match	CPT2	ENST00000371486.3	3094	5	390	274	-1	77	multi-exon	FALSE	canonical	1	180192	junction_2	17562.932263363655	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	126	2102	90.0	-5	True	NA	NA
PB.416.3	chr1	+	2274	5	full-splice_match	CPT2	ENST00000371486.3	3094	5	389	431	-2	-80	multi-exon	FALSE	canonical	1	180192	junction_2	17562.932263363655	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	127	2103	60.0	-6	True	NA	NA
PB.416.2	chr1	+	2652	5	full-splice_match	CPT2	ENST00000636867.1	2643	5	8	-17	0	-2	multi-exon	FALSE	canonical	1	15796	junction_4	79766.81242651922	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	145	2052	25.0	-24	True	AATAAA	-17
PB.9775.9	chr6	+	2463	4	novel_not_in_catalog	CDKAL1	novel	3272	16	NA	NA	-10	40944	intron_retention	FALSE	canonical	1	6895	junction_3	84061.51305773384	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	930	1229	10.0	-10	True	ATTAAA	-18
PB.9775.8	chr6	+	2618	16	novel_not_in_catalog	CDKAL1	novel	3272	16	NA	NA	8	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	57749.07167908031	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	160	1836	35.0	-16	True	AATAAA	-20
PB.9775.7	chr6	+	3153	1	novel_in_catalog	CDKAL1	novel	3272	16	NA	NA	5	-22058	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	115	348	2370	2717	85.0	-19	True	NA	NA
PB.9775.6	chr6	+	2494	10	incomplete-splice_match	CDKAL1	ENST00000274695.8	3272	16	4	275397	4	-274434	3prime_fragment	FALSE	canonical	1	108662	junction_1	33930.44925784959	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	164	1102	95.0	-20	True	GATAAA	-17
PB.9775.5	chr6	+	2688	17	novel_not_in_catalog	CDKAL1	novel	3272	16	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	48845.465850219916	NA	2	1	TRUE	NA	NA	NA	C	coding	579	1740	168	1907	35.0	-24	True	AATAAA	-20
PB.9775.4	chr6	+	3270	16	full-splice_match	CDKAL1	ENST00000274695.8	3272	16	0	2	0	-2	multi-exon	FALSE	canonical	1	98829	junction_13	34380.79150701578	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	168	1907	30.0	-24	True	AATAAA	-21
PB.9775.3	chr6	+	1973	16	full-splice_match	CDKAL1	ENST00000274695.8	3272	16	-1	1300	-1	-337	multi-exon	FALSE	canonical	1	98829	junction_13	34380.79150701578	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	169	1908	30.0	-25	True	ATTAAA	-17
PB.9775.2	chr6	+	2653	11	novel_not_in_catalog	CDKAL1	novel	3272	16	NA	NA	-9	-274433	any annotated donor/acceptor	FALSE	canonical	1	488	junction_8	70793.98533074684	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	177	821	100.0	-33	True	GATAAA	-18
PB.9775.1	chr6	+	3216	15	novel_in_catalog	CDKAL1	novel	3272	16	NA	NA	-10	-3	no_combination_of_known_junctions	FALSE	canonical	1	20400	junction_12	46833.27648228689	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	178	1854	35.0	-34	True	AATAAA	-20
PB.10400.6	chr7	+	1923	5	novel_not_in_catalog	C1GALT1	novel	802	4	NA	NA	-15	-4520	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	62375.96989776993	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	432	1523	40.0	-915	False	AATAAA	-32
PB.5445.1	chr18	+	2246	5	novel_not_in_catalog	ZNF397	novel	690	2	NA	NA	-1	2607	any annotated donor/acceptor	FALSE	canonical	1	3740	junction_1	44503.878968579804	NA	2	NA	TRUE	NA	NA	NA	C	coding	534	1605	245	1849	85.0	-20	True	GGGGCT	-37
PB.5445.3	chr18	+	2337	4	novel_not_in_catalog	ZNF397	novel	690	2	NA	NA	0	2607	any annotated donor/acceptor	FALSE	canonical	1	7487	junction_3	44733.38490061608	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	1155	1940	85.0	-19	True	GGGGCT	-37
PB.5445.2	chr18	+	2561	4	novel_in_catalog	ZNF397	novel	690	2	NA	NA	155	2607	combination_of_known_junctions	FALSE	canonical	1	35037	junction_1	33798.74796826389	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	560	2164	85.0	124	False	GGGGCT	-37
PB.5445.4	chr18	+	2146	4	full-splice_match	ZNF397	ENST00000330501.11	5251	4	9	3096	-5	2607	multi-exon	FALSE	canonical	1	79218	junction_1	14752.53253588082	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	145	1749	85.0	-9	True	GGGGCT	-37
PB.8154.1	chr3	+	1454	15	full-splice_match	ACY1	ENST00000636358.1	1684	15	224	6	-21	1	multi-exon	FALSE	canonical	1	269711	junction_2	106679.19849146137	NA	0	NA	TRUE	NA	NA	NA	A	coding	408	1227	107	1333	35.0	-33	True	AATAAA	-37
PB.11160.8	chr8	-	1914	7	full-splice_match	ARMC1	ENST00000276569.7	3032	7	32	1086	2	833	multi-exon	FALSE	canonical	1	110412	junction_4	101445.24742728627	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	235	1062	65.0	1	True	NA	NA
PB.4955.1	chr17	+	2564	1	genic	AC090844.2	novel	NA	NA	NA	NA	-28	807	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-34	False	NA	NA
PB.11255.3	chr8	-	4468	1	full-splice_match	TSPYL5	ENST00000322128.4	4491	1	7	16	7	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	417	1254	114	1367	35.0	-52	True	AATAAA	-16
PB.6108.4	chr19	-	1440	9	full-splice_match	NAPA	ENST00000594001.5	1417	9	16	-39	1	1	multi-exon	FALSE	canonical	1	46223	junction_8	569307.044481477	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	245	793	10.0	-11	True	AATAAA	-16
PB.6108.5	chr19	-	2571	9	novel_in_catalog	NAPA	novel	1839	11	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1163106	junction_6	243820.7412588191	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	1500	1925	10.0	-32	True	AATAAA	-15
PB.6108.6	chr19	-	2505	10	novel_in_catalog	NAPA	novel	1839	11	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1163106	junction_7	230064.4272818882	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	131	973	10.0	-39	True	AATAAA	-15
PB.6108.1	chr19	-	2787	10	novel_in_catalog	NAPA	novel	1839	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	1163106	junction_7	233627.63494268735	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	92	1117	10.0	0	True	AATAAA	-19
PB.6108.2	chr19	-	1632	11	full-splice_match	NAPA	ENST00000263354.7	1839	11	206	1	-2	0	multi-exon	FALSE	canonical	1	1163106	junction_8	249305.14399418238	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	95	982	10.0	-3	True	AATAAA	-19
PB.6108.3	chr19	-	1606	12	novel_not_in_catalog	NAPA	novel	1839	11	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	506385.9657307926	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	123	1010	10.0	-31	True	AATAAA	-19
PB.11255.1	chr8	-	3299	1	full-splice_match	TSPYL5	ENST00000322128.4	4491	1	1179	13	1179	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	104	315	859	1173	40.0	1120	False	AATAAA	-19
PB.4836.1	chr17	+	2628	1	incomplete-splice_match	KCNJ12	ENST00000583088.5	5425	3	41044	4	12105	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	106	321	837	1157	15.0	5936	False	ATTAAA	-18
PB.8490.5	chr3	-	2940	8	novel_in_catalog	VEPH1	novel	3979	13	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	1	1982	junction_3	13920.584880980088	NA	0	NA	TRUE	NA	NA	NA	B	coding	470	1413	139	1551	25.0	NA	False	NA	NA
PB.1984.4	chr11	-	920	4	full-splice_match	FTH1	ENST00000273550.11	1229	4	28	281	-1	0	multi-exon	FALSE	canonical	1	143257	junction_1	2040812.4866304814	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	208	759	10.0	1	True	AATAAA	-15
PB.1984.1	chr11	-	1199	4	full-splice_match	FTH1	ENST00000273550.11	1229	4	28	2	-1	-2	multi-exon	FALSE	canonical	1	143257	junction_1	2040812.4866304814	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	208	759	25.0	1	True	AATAAA	-16
PB.1984.2	chr11	-	1063	4	full-splice_match	FTH1	ENST00000273550.11	1229	4	29	137	0	-137	multi-exon	FALSE	canonical	1	143257	junction_1	2040812.4866304814	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	207	758	20.0	2	True	ATTAAA	-18
PB.11740.1	chr9	-	3116	1	novel_in_catalog	POLE3	novel	2109	4	NA	NA	-6	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-11	True	AATAAA	-10
PB.517.9	chr1	+	4672	8	novel_not_in_catalog	HS2ST1	novel	1585	5	NA	NA	0	-1805	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	111785.07806719908	NA	3	NA	TRUE	NA	NA	NA	C	coding	356	1071	105	1175	45.0	-71	True	AATAAA	-15
PB.517.8	chr1	+	2892	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	71	3773	71	-3773	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	293	1363	10.0	0	True	TATAAA	-20
PB.471.1	chr1	-	2837	15	full-splice_match	LRRC40	ENST00000370952.3	2884	15	46	1	46	-1	multi-exon	TRUE	canonical	1	154335	junction_5	38549.73105599825	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	35	1843	25.0	-15	True	AATAAA	-22
PB.517.3	chr1	+	5958	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	-39	817	-13	-817	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	403	1473	25.0	-110	True	AATAAA	-15
PB.517.2	chr1	+	3370	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	-47	3413	-21	-3413	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	411	1481	70.0	-118	True	TATAAA	-22
PB.9325.2	chr5	+	1441	6	full-splice_match	ZCCHC9	ENST00000407610.7	1555	6	-39	153	-17	-10	multi-exon	FALSE	canonical	1	136916	junction_1	82352.51839597864	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	213	959	35.0	-422	False	AATAAA	-25
PB.517.7	chr1	+	6396	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	339	1	339	-1	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	3	NA	TRUE	NA	NA	NA	C	coding	356	1071	25	1095	25.0	86	False	TATAAA	-18
PB.4551.1	chr16	-	2459	7	full-splice_match	FA2H	ENST00000219368.7	2424	7	-53	18	-47	-18	multi-exon	FALSE	canonical	1	42324	junction_6	23347.884853641215	NA	0	NA	TRUE	NA	NA	NA	A	coding	372	1119	124	1242	70.0	-59	False	AATAAA	-36
PB.11403.3	chr8	+	3394	16	novel_in_catalog	KIFC2	novel	3566	18	NA	NA	-15	0	intron_retention	FALSE	canonical	1	105875	junction_1	111090.43734123412	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	84	1076	15.0	0	True	AATAAA	-15
PB.517.4	chr1	+	6192	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	-38	582	-12	-582	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	4	NA	TRUE	NA	NA	NA	C	coding	356	1071	402	1472	60.0	-109	True	AATAAA	-12
PB.11479.2	chr9	-	4185	7	full-splice_match	HACD4	ENST00000495827.2	8267	7	-29	4111	-29	-4111	multi-exon	FALSE	canonical	1	115139	junction_6	35124.495901483526	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	2769	3200	40.0	-33	False	AATAAA	-12
PB.8951.1	chr4	-	1997	1	full-splice_match	TRAM1L1	ENST00000310754.5	2023	1	18	8	18	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	369	1110	166	1275	50.0	17	True	ATTAAA	-10
PB.9490.6	chr5	+	1549	8	novel_not_in_catalog	UBE2D2	novel	656	7	NA	NA	-205	5	intron_retention	FALSE	non_canonical	0	0	junction_1	670564.7337907939	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	216	659	20.0	-5	True	AATAAA	-26
PB.9490.5	chr5	+	1827	6	novel_in_catalog	UBE2D2	novel	656	7	NA	NA	209	3	intron_retention	FALSE	canonical	1	839130	junction_1	449002.7941269854	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	1	351	25.0	-6	True	AATAAA	-24
PB.9490.4	chr5	+	1919	8	novel_in_catalog	UBE2D2	novel	656	7	NA	NA	202	3	intron_retention	FALSE	canonical	1	32019	junction_1	793911.6608710189	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	699	1031	25.0	-13	True	AATAAA	-24
PB.9490.3	chr5	+	2304	7	full-splice_match	UBE2D2	ENST00000398733.7	2702	7	203	195	202	-195	multi-exon	FALSE	canonical	1	839130	junction_1	413551.603635071	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	424	867	35.0	-13	True	AGTAAA	-19
PB.9490.2	chr5	+	2355	7	full-splice_match	UBE2D2	ENST00000398733.7	2702	7	351	-4	-207	4	multi-exon	FALSE	canonical	1	839130	junction_1	413551.603635071	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	276	719	10.0	-7	True	AATAAA	-27
PB.9490.1	chr5	+	1335	7	full-splice_match	UBE2D2	ENST00000398733.7	2702	7	623	744	63	3	multi-exon	FALSE	canonical	1	839130	junction_1	413551.603635071	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	4	447	25.0	7	False	AATAAA	-24
PB.145.44	chr1	-	2681	4	novel_in_catalog	HP1BP3	novel	3938	13	NA	NA	-1	-111	combination_of_known_junctions	FALSE	canonical	1	56377	junction_1	523201.4137066782	NA	3	NA	TRUE	NA	NA	NA	C	coding	95	288	138	425	5.0	-7	True	AATAAA	-17
PB.5451.8	chr18	-	4265	11	novel_not_in_catalog	SLC39A6	novel	3543	10	NA	NA	-26	-1	any annotated donor/acceptor	FALSE	canonical	1	4799	junction_9	333707.3580927008	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	938	3205	15.0	-8	True	AATAAA	-17
PB.2415.8	chr12	+	2915	8	novel_in_catalog	GAPDH	novel	1875	9	NA	NA	6	-1	intron_retention	FALSE	canonical	1	9781025	junction_3	7088332.179974491	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	1711	2715	15.0	1	True	AATAAA	-18
PB.5451.2	chr18	-	3410	10	full-splice_match	SLC39A6	ENST00000269187.9	3543	10	133	0	133	0	multi-exon	FALSE	canonical	1	457822	junction_9	150014.91254316462	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	82	2349	15.0	16	True	AATAAA	-18
PB.5451.3	chr18	-	2820	9	novel_in_catalog	SLC39A6	novel	3543	10	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	1	9169	junction_8	284718.5064673528	NA	2	NA	TRUE	NA	NA	NA	C	coding	480	1443	316	1758	10.0	-56	True	AATAAA	-19
PB.6187.8	chr19	-	2467	5	novel_in_catalog	ZNF83	novel	810	6	NA	NA	-1	-321	no_combination_of_known_junctions	FALSE	canonical	1	2350	junction_2	62613.99478750737	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	602	2152	55.0	-12	True	NA	NA
PB.5451.6	chr18	-	3127	11	novel_not_in_catalog	SLC39A6	novel	3543	10	NA	NA	-20	0	any annotated donor/acceptor	FALSE	canonical	1	10922	junction_1	267586.25216935197	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	235	2610	15.0	-2	True	AATAAA	-18
PB.5451.4	chr18	-	3581	10	novel_not_in_catalog	SLC39A6	novel	3543	10	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	52	junction_2	281128.60072378546	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	276	2216	15.0	-43	True	AATAAA	-18
PB.10540.1	chr7	+	8033	6	novel_in_catalog	UPP1	novel	864	6	NA	NA	-1	0	intron_retention	TRUE	canonical	1	135765	junction_3	264163.23372596723	NA	12	NA	TRUE	NA	NA	NA	C	coding	103	312	7664	7975	25.0	-1	True	ATTAAA	-11
PB.10540.2	chr7	+	1381	9	full-splice_match	UPP1	ENST00000395564.8	1375	9	-10	4	0	0	multi-exon	FALSE	canonical	1	213537	junction_5	235370.94635795112	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	391	1323	25.0	0	True	ATTAAA	-11
PB.8948.8	chr4	-	4057	19	full-splice_match	CAMK2D	ENST00000342666.9	1940	19	-429	-1688	-46	544	multi-exon	FALSE	canonical	1	73116	junction_1	100126.7758440102	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	430	1929	20.0	1122	False	AATAAA	-17
PB.11129.10	chr8	-	3511	1	novel_in_catalog	ATP6V1H	novel	2365	13	NA	NA	10846	-11751	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	234	705	2774	3478	70.0	NA	False	NA	NA
PB.8948.9	chr4	-	3726	19	novel_not_in_catalog	CAMK2D	novel	5294	18	NA	NA	24	546	any annotated donor/acceptor	FALSE	canonical	1	3109	junction_17	123184.76216968748	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	310	1629	15.0	0	True	AATAAA	-19
PB.8490.8	chr3	-	2137	9	novel_in_catalog	VEPH1	novel	3979	13	NA	NA	-42	194	combination_of_known_junctions	FALSE	canonical	1	2708	junction_8	10052.52204362169	NA	0	NA	TRUE	NA	NA	NA	B	coding	515	1548	171	1718	75.0	NA	False	NA	NA
PB.8856.1	chr4	+	1394	1	antisense	novelGene_PLAC8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.7423.1	chr20	+	1664	7	incomplete-splice_match	SLC2A4RG	ENST00000266077.4	1731	8	401	4	19	-4	5prime_fragment	FALSE	canonical	1	723069	junction_1	166132.95612124444	NA	0	NA	TRUE	NA	NA	NA	A	coding	282	849	305	1153	15.0	0	True	ATTAAA	-17
PB.9628.12	chr5	+	2600	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-7	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	1	1	TRUE	NA	NA	NA	C	coding	322	969	93	1061	40.0	-12	True	AATAAA	-10
PB.8260.51	chr3	-	2448	1	genic	DCBLD2	novel	NA	NA	NA	NA	-38	-49892	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	279	False	NA	NA
PB.9628.13	chr5	+	2361	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-4	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	4	NA	TRUE	NA	NA	NA	C	coding	322	969	90	1058	40.0	-9	True	AATAAA	-10
PB.7627.18	chr22	+	2406	12	novel_not_in_catalog	MED15	novel	590	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	266418.9104052811	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	123	1493	15.0	-4	True	AATAAA	-16
PB.92.1	chr1	+	1908	6	full-splice_match	FBXO44	ENST00000251547.9	2903	6	-42	1037	2	0	multi-exon	FALSE	canonical	1	124280	junction_3	118521.56646180476	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	125	892	10.0	-9507	False	NA	NA
PB.10915.4	chr7	-	2412	11	novel_in_catalog	ZNF767P	novel	3520	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	5782	junction_6	36399.682413999166	NA	2	NA	TRUE	NA	NA	NA	B	coding	105	318	225	542	15.0	37	False	NA	NA
PB.10915.5	chr7	-	3519	9	novel_not_in_catalog	ZNF767P	novel	3520	8	NA	NA	25	-3	intron_retention	FALSE	canonical	1	10189	junction_3	27778.348968891223	NA	2	NA	TRUE	NA	NA	NA	B	coding	105	318	78	395	15.0	184	False	NA	NA
PB.10915.2	chr7	-	3696	10	novel_in_catalog	ZNF767P	novel	3520	8	NA	NA	28	-2	intron_retention	FALSE	canonical	1	5782	junction_5	34419.0403765771	NA	1	1	TRUE	NA	NA	NA	B	coding	118	357	135	491	15.0	1	True	NA	NA
PB.10915.3	chr7	-	3672	9	novel_in_catalog	ZNF767P	novel	3520	8	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	59475	junction_2	16084.573181701155	NA	1	NA	TRUE	NA	NA	NA	B	coding	105	318	234	551	15.0	28	False	NA	NA
PB.92.6	chr1	+	2261	7	full-splice_match	FBXO44	ENST00000376770.5	3320	7	20	1039	-4	-1	multi-exon	FALSE	canonical	1	21122	junction_1	159017.17536130772	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	479	1246	10.0	0	True	NA	NA
PB.10915.1	chr7	-	3774	9	novel_in_catalog	ZNF767P	novel	3520	8	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	67100	junction_4	14424.177307562466	NA	0	NA	TRUE	NA	NA	NA	B	coding	105	318	255	572	15.0	7	True	NA	NA
PB.9201.2	chr5	+	3007	6	novel_in_catalog	FBXO4	novel	719	4	NA	NA	7	-7	intron_retention	FALSE	canonical	1	106407	junction_5	36899.51423853707	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	1684	2727	40.0	-44	True	ATTAAA	-7
PB.9201.1	chr5	+	1507	7	full-splice_match	FBXO4	ENST00000281623.7	1682	7	-7	182	-7	-7	multi-exon	FALSE	canonical	1	64033	junction_1	45216.00568536421	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	64	1227	40.0	-58	True	ATTAAA	-7
PB.10635.10	chr7	+	4490	15	incomplete-splice_match	PHTF2	ENST00000248550.7	4778	19	60529	-2	-5552	-1	5prime_fragment	FALSE	canonical	1	114643	junction_10	45656.89014060445	NA	2	NA	TRUE	NA	NA	NA	C	coding	610	1833	312	2144	15.0	NA	False	AATAAA	-15
PB.9628.17	chr5	+	2829	11	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	1	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	340384.75661586254	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	85	870	40.0	24	True	AATAAA	-10
PB.9628.14	chr5	+	2708	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-3	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	5	NA	TRUE	NA	NA	NA	C	coding	322	969	89	1057	40.0	-8	True	AATAAA	-10
PB.8598.11	chr3	+	3860	12	full-splice_match	IL1RAP	ENST00000447382.5	4769	12	23	886	-5	-886	multi-exon	FALSE	canonical	1	53958	junction_1	38325.99627682978	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	227	1939	25.0	-8	True	AATAAA	-14
PB.8598.10	chr3	+	4970	13	novel_not_in_catalog	IL1RAP	novel	4697	11	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	102	junction_1	68811.2093712855	NA	3	NA	TRUE	NA	NA	NA	C	coding	453	1362	447	1808	20.0	-14	True	AATAAA	-20
PB.8598.13	chr3	+	4766	12	novel_not_in_catalog	IL1RAP	novel	4697	11	NA	NA	1	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48631.52653669486	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	243	1955	10.0	-2	True	AATAAA	-24
PB.10761.6	chr7	+	1592	11	novel_in_catalog	PMPCB	novel	2472	13	NA	NA	7	-2	intron_retention	FALSE	canonical	1	72366	junction_6	395117.38422257506	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	19	771	25.0	-6	True	ATTAAA	-43
PB.8598.14	chr3	+	4588	10	novel_in_catalog	IL1RAP	novel	4697	11	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	1881	junction_1	47338.04030586818	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	162	1781	20.0	-2	True	AATAAA	-20
PB.8948.7	chr4	-	4229	18	novel_in_catalog	CAMK2D	novel	5294	18	NA	NA	142	546	no_combination_of_known_junctions	FALSE	canonical	1	2183	junction_17	144776.21725879118	NA	8	NA	TRUE	NA	NA	NA	C	coding	349	1050	1083	2132	15.0	1	True	AATAAA	-19
PB.2028.3	chr11	+	3884	16	novel_not_in_catalog	CCDC88B	novel	5235	25	NA	NA	-18	-10	intron_retention	FALSE	canonical	1	2556	junction_11	61985.971330939065	NA	14	1	TRUE	NA	NA	NA	B	coding	365	1098	235	1332	80.0	-11	True	NA	NA
PB.2028.2	chr11	+	3949	16	incomplete-splice_match	CCDC88B	ENST00000463837.5	5235	25	-26	6839	-26	-10	3prime_fragment	FALSE	canonical	1	62746	junction_10	44172.63862900754	NA	0	NA	TRUE	NA	NA	NA	B	coding	972	2919	71	2989	80.0	-19	True	NA	NA
PB.12268.11	chrX	+	3148	11	novel_not_in_catalog	STK26	novel	3288	12	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	6089	junction_3	215222.14354057529	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	411	1364	10.0	3	True	AATAAA	-19
PB.12268.10	chrX	+	3197	12	novel_not_in_catalog	STK26	novel	3288	12	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	4451	junction_11	181356.36605783235	NA	10	1	TRUE	NA	NA	NA	C	coding	421	1266	226	1491	10.0	-315	False	AATAAA	-18
PB.4947.1	chr17	-	3940	16	novel_not_in_catalog	FBXL20	novel	10388	15	NA	NA	-1	-141	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	34185.88612369471	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	223	1533	85.0	0	True	TTTAAA	-13
PB.9699.1	chr6	+	1137	7	full-splice_match	NQO2	ENST00000380455.8	10084	7	-160	9107	-39	0	multi-exon	FALSE	canonical	1	382102	junction_1	78801.65430317225	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	335	1030	10.0	-41	True	AATAAA	-23
PB.2028.4	chr11	+	6534	26	novel_not_in_catalog	CCDC88B	novel	5235	25	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	101820.27957560516	NA	10	2	TRUE	NA	NA	NA	B	coding	974	2925	27	2951	5.0	2	True	AATAAA	-18
PB.11160.6	chr8	-	2339	7	full-splice_match	ARMC1	ENST00000276569.7	3032	7	-1	694	-1	-691	multi-exon	FALSE	canonical	1	110412	junction_4	101445.24742728627	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	268	1095	35.0	2	True	ATTAAA	-22
PB.8461.42	chr3	-	1691	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	65	347	5	18	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	276	1478	20.0	-12	True	AATAAA	-22
PB.3070.1	chr13	+	2723	5	novel_in_catalog	RPL21	novel	815	6	NA	NA	-4	-5	intron_retention	FALSE	canonical	1	369	junction_4	13006.424575954761	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	2203	2685	30.0	-2	True	AATAAA	-16
PB.1555.12	chr10	-	2815	15	incomplete-splice_match	ALDH18A1	ENST00000371221.3	3337	18	19348	3	-8505	-3	5prime_fragment	FALSE	canonical	1	87087	junction_12	211662.71387961236	NA	0	NA	TRUE	NA	NA	NA	B	coding	643	1932	70	2001	30.0	NA	False	AATAAA	-8
PB.1555.11	chr10	-	3356	18	novel_not_in_catalog	ALDH18A1	novel	3359	18	NA	NA	-12	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	204636.94159354817	NA	100	7	TRUE	NA	NA	NA	B	coding	729	2190	151	2340	30.0	-60	True	AATAAA	-8
PB.312.1	chr1	-	2676	16	full-splice_match	PABPC4	ENST00000372858.7	2753	16	73	4	73	-4	multi-exon	FALSE	canonical	1	240940	junction_2	549988.4797343385	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	378	2360	25.0	578	False	AATAAA	-17
PB.312.2	chr1	-	2629	17	novel_not_in_catalog	PABPC4	novel	633	2	NA	NA	-77	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	648099.5734950976	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	378	2312	20.0	1	True	AATAAA	-18
PB.1555.10	chr10	-	3187	17	novel_in_catalog	ALDH18A1	novel	3359	18	NA	NA	39	-1	no_combination_of_known_junctions	FALSE	canonical	1	1617	junction_16	218352.80083212667	NA	0	NA	TRUE	NA	NA	NA	B	coding	684	2055	317	2371	25.0	-9	True	AATAAA	-10
PB.312.4	chr1	-	2874	17	novel_in_catalog	PABPC4	novel	633	2	NA	NA	-64	-4	combination_of_known_junctions	FALSE	canonical	1	19910	junction_16	622543.0684064155	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	576	2558	25.0	-5	True	AATAAA	-17
PB.7430.2	chr20	+	2903	21	full-splice_match	PRPF6	ENST00000266079.4	3044	21	139	2	139	-2	multi-exon	FALSE	canonical	1	487560	junction_1	209170.35335565006	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	3	2798	20.0	-1775	False	ATTAAA	-22
PB.312.8	chr1	-	3099	16	novel_in_catalog	PABPC4	novel	633	2	NA	NA	-1	-26	intron_retention	FALSE	canonical	1	58773	junction_7	619802.2728031756	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	838	2805	65.0	1	True	NA	NA
PB.2174.10	chr11	+	3349	15	full-splice_match	UVRAG	ENST00000356136.7	4123	15	229	545	229	-1	multi-exon	FALSE	canonical	1	125686	junction_1	42021.29457380107	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	13	2112	15.0	186	False	AATAAA	-16
PB.9668.1	chr5	+	5228	6	novel_not_in_catalog	MAML1	novel	5723	5	NA	NA	-36	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	104858.69091229395	NA	1	NA	TRUE	NA	NA	NA	A	coding	930	2793	33	2825	35.0	-17	True	AATAAA	-18
PB.10667.19	chr7	-	2712	1	novel_in_catalog	CYP51A1	novel	3210	10	NA	NA	56	-18069	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	105	318	2	319	70.0	-1	True	NA	NA
PB.9334.1	chr5	-	2828	14	novel_not_in_catalog	TMEM161B	novel	2035	13	NA	NA	-16	1337	any annotated donor/acceptor	TRUE	canonical	1	1560	junction_1	34756.11314498135	NA	3	1	TRUE	NA	NA	NA	A	coding	326	981	593	1573	90.0	-45	False	NA	NA
PB.1752.8	chr11	-	3238	15	novel_not_in_catalog	PIDD1	novel	3175	15	NA	NA	9	-1	intron_retention	FALSE	canonical	1	896	junction_14	65562.6582996085	NA	2	1	TRUE	NA	NA	NA	C	coding	597	1794	1324	3117	25.0	14	True	NA	NA
PB.1752.6	chr11	-	2967	16	novel_in_catalog	PIDD1	novel	3175	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	45976	junction_15	66250.8228434938	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	164	2845	25.0	4262	False	NA	NA
PB.1752.4	chr11	-	2969	16	novel_not_in_catalog	PIDD1	novel	3175	15	NA	NA	-6	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	80062.96379214438	NA	2	1	TRUE	NA	NA	NA	C	coding	614	1845	118	1962	20.0	-1	True	NA	NA
PB.1752.5	chr11	-	3046	16	novel_in_catalog	PIDD1	novel	3175	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	14927	junction_15	66945.6788636545	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	192	2924	25.0	1	True	NA	NA
PB.1752.2	chr11	-	3009	16	novel_in_catalog	PIDD1	novel	3175	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	14927	junction_15	70176.2086720437	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	201	2882	20.0	-8	True	NA	NA
PB.1752.3	chr11	-	3014	16	full-splice_match	PIDD1	ENST00000347755.9	2998	16	-16	0	-16	0	multi-exon	FALSE	canonical	1	45976	junction_15	62673.29981930104	NA	1	NA	TRUE	NA	NA	NA	C	coding	910	2733	159	2891	20.0	4267	False	NA	NA
PB.1752.1	chr11	-	3255	15	novel_not_in_catalog	PIDD1	novel	3175	15	NA	NA	15	0	intron_retention	TRUE	canonical	1	129	junction_6	76887.75637225463	NA	3	1	TRUE	NA	NA	NA	C	coding	311	936	1394	2329	20.0	-7	True	NA	NA
PB.10667.14	chr7	-	2219	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	29	962	29	299	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	138	1667	50.0	8450	False	NA	NA
PB.10667.15	chr7	-	2093	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	17	1100	17	161	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	150	1679	25.0	0	True	AATAAA	-28
PB.8312.1	chr3	-	2942	10	full-splice_match	ZBTB20	ENST00000357258.8	27125	10	6	24177	0	6	multi-exon	FALSE	canonical	1	12813	junction_9	17900.512546631137	NA	2	1	TRUE	NA	NA	NA	C	coding	668	2007	609	2615	90.0	-6	True	AATACA	-26
PB.8312.3	chr3	-	3338	13	novel_not_in_catalog	ZBTB20	novel	27125	10	NA	NA	5	-7	any annotated donor/acceptor	FALSE	canonical	1	1368	junction_12	27166.50371768615	NA	5	1	TRUE	NA	NA	NA	C	coding	741	2226	799	3024	70.0	-1	True	AATACA	-13
PB.8312.2	chr3	-	2892	6	novel_in_catalog	ZBTB20	novel	27125	10	NA	NA	20	6	combination_of_known_junctions	FALSE	canonical	1	6319	junction_5	23213.041305266313	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2226	340	2565	90.0	459	False	AATACA	-26
PB.8312.4	chr3	-	2831	5	novel_in_catalog	ZBTB20	novel	27125	10	NA	NA	38	-7	combination_of_known_junctions	FALSE	canonical	1	6319	junction_4	23802.807422392427	NA	1	NA	TRUE	NA	NA	NA	C	coding	668	2007	511	2517	70.0	343	False	AATACA	-13
PB.10667.17	chr7	-	1695	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	-6	1521	-6	22	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1521	173	1693	55.0	8415	False	NA	NA
PB.8601.41	chr3	+	3050	28	full-splice_match	OPA1	ENST00000646793.1	5830	28	-21	2801	-2	-685	multi-exon	FALSE	canonical	1	29773	junction_3	149037.88271280943	NA	2	NA	TRUE	NA	NA	NA	C	coding	924	2775	153	2927	45.0	18	True	AATAAA	-11
PB.8601.40	chr3	+	3423	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	40	2934	-2	-531	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	153	3146	25.0	18	True	AATATA	-35
PB.8601.43	chr3	+	2949	25	novel_in_catalog	OPA1	novel	6384	30	NA	NA	54	-15	combination_of_known_junctions	FALSE	canonical	1	2910	junction_24	164325.92073059137	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	342	2462	65.0	NA	False	NA	NA
PB.8006.14	chr3	+	5591	18	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	-17	539	intron_retention	FALSE	canonical	1	3680	junction_1	403314.80621222785	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	3160	5109	10.0	-40	True	AATAAA	-15
PB.10667.10	chr7	-	3107	10	full-splice_match	CYP51A1	ENST00000003100.12	3210	10	16	87	16	-87	multi-exon	FALSE	canonical	1	14694	junction_4	72811.62883312894	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	151	1680	45.0	-1	True	NA	NA
PB.8006.17	chr3	+	8185	17	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	-11	0	intron_retention	FALSE	canonical	1	21513	junction_11	330713.4689058406	NA	2	NA	TRUE	NA	NA	NA	C	coding	649	1950	3059	5008	25.0	-34	True	AATAAA	-16
PB.7632.2	chr22	-	1346	3	full-splice_match	THAP7	ENST00000498406.1	1957	3	-59	670	-6	-1	multi-exon	FALSE	canonical	1	441377	junction_2	64006.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	741	1121	10.0	-15	True	AATAAA	-16
PB.3006.1	chr12	+	4570	8	novel_not_in_catalog	ZNF664	novel	592	5	NA	NA	-27	1	any annotated donor/acceptor	FALSE	canonical	1	1781	junction_4	215975.32301083067	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1288	2073	15.0	1	True	AATAAA	-18
PB.3006.2	chr12	+	4224	4	full-splice_match	ZNF664	ENST00000541448.5	567	4	-9	-3648	-6	0	multi-exon	FALSE	canonical	1	43519	junction_2	237239.10719824888	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	943	1728	15.0	-67	True	AATAAA	-17
PB.3006.3	chr12	+	4590	8	novel_not_in_catalog	ZNF664	novel	592	5	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	1	375	junction_3	201574.40819808492	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1307	2092	15.0	-57	True	AATAAA	-19
PB.3006.4	chr12	+	4165	4	full-splice_match	ZNF664	ENST00000543017.5	455	4	-56	-3654	-2	1	multi-exon	FALSE	canonical	1	43519	junction_2	251845.573890474	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	883	1668	15.0	-56	True	AATAAA	-18
PB.3006.5	chr12	+	4436	7	novel_not_in_catalog	ZNF664	novel	592	5	NA	NA	1	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	227585.44743946657	NA	2	NA	TRUE	NA	NA	NA	C	coding	261	786	1154	1939	15.0	-53	True	AATAAA	-18
PB.3006.6	chr12	+	4311	6	novel_in_catalog	ZNF664	novel	592	5	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	41537	junction_4	221214.4319894161	NA	9	1	TRUE	NA	NA	NA	C	coding	261	786	1030	1815	15.0	-49	True	AATAAA	-17
PB.3006.7	chr12	+	4489	8	novel_not_in_catalog	ZNF664	novel	592	5	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	220845.7726158364	NA	18	2	TRUE	NA	NA	NA	C	coding	261	786	1208	1993	15.0	-46	True	AATAAA	-17
PB.3006.8	chr12	+	4297	5	full-splice_match	ZNF664	ENST00000337815.8	4227	5	-66	-4	10	0	multi-exon	FALSE	canonical	1	219272	junction_1	139597.9988583289	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1016	1801	15.0	-44	True	AATAAA	-17
PB.3006.9	chr12	+	4344	6	novel_in_catalog	ZNF664	novel	592	5	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	41537	junction_4	213637.93780262905	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	1062	1847	15.0	-32	True	AATAAA	-18
PB.9770.1	chr6	+	4654	8	full-splice_match	RNF144B	ENST00000259939.3	5036	8	121	261	-43	-261	multi-exon	FALSE	canonical	1	82402	junction_4	17960.457700635765	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	230	1108	25.0	-8	True	AATAAA	-18
PB.5949.8	chr19	-	3345	3	full-splice_match	ZNF260	ENST00000523638.5	5666	3	396	1925	1	-841	multi-exon	FALSE	canonical	1	63171	junction_1	3542.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	736	1965	35.0	2	True	NA	NA
PB.11496.1	chr9	-	3924	1	novel_in_catalog	NDUFB6	novel	1366	4	NA	NA	1	-15587	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	138	417	102	518	90.0	-3	True	NA	NA
PB.8006.10	chr3	+	2925	18	full-splice_match	PDCD6IP	ENST00000307296.7	6161	18	537	2699	-51	535	multi-exon	FALSE	canonical	1	21513	junction_12	322790.17155091406	NA	0	NA	TRUE	NA	NA	NA	C	coding	678	2037	411	2447	20.0	-9938	False	AATAAA	-11
PB.11357.4	chr8	-	4355	31	novel_in_catalog	PTK2	novel	4955	32	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	92242	junction_28	131363.22452927567	NA	1	1	TRUE	NA	NA	NA	C	coding	939	2820	455	3274	0.0	792	False	ATTAAA	-35
PB.10976.4	chr8	+	3827	7	full-splice_match	ERI1	ENST00000250263.7	4615	7	104	684	17	-683	multi-exon	FALSE	canonical	1	154351	junction_1	25092.211793037826	NA	4	NA	TRUE	NA	NA	NA	C	coding	349	1050	157	1206	45.0	11	True	ATTAAA	-13
PB.7661.6	chr22	+	2519	3	full-splice_match	ADORA2A	ENST00000337539.11	2569	3	41	9	-24	-5	multi-exon	FALSE	canonical	1	17742	junction_1	48690.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	412	1239	419	1657	35.0	3	True	AATAAA	-31
PB.7661.5	chr22	+	1918	2	novel_in_catalog	SPECC1L-ADORA2A	novel	6204	20	NA	NA	156701	-4	no_combination_of_known_junctions	FALSE	canonical	1	2241	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	273	822	234	1055	30.0	-1	True	AATAAA	-32
PB.7661.4	chr22	+	2540	3	novel_in_catalog	SPECC1L-ADORA2A	novel	6204	20	NA	NA	156665	-4	no_combination_of_known_junctions	FALSE	canonical	1	8471	junction_1	53325.5	NA	2	NA	TRUE	NA	NA	NA	B	coding	412	1239	439	1677	30.0	-8	True	AATAAA	-32
PB.7661.3	chr22	+	2678	4	novel_in_catalog	SPECC1L-ADORA2A	novel	6204	20	NA	NA	156652	-5	no_combination_of_known_junctions	FALSE	canonical	1	327	junction_1	52499.96324019877	NA	1	NA	TRUE	NA	NA	NA	B	coding	412	1239	578	1816	35.0	-21	True	AATAAA	-31
PB.7661.2	chr22	+	1835	2	novel_in_catalog	SPECC1L-ADORA2A	novel	6204	20	NA	NA	152993	-6	no_combination_of_known_junctions	FALSE	canonical	1	1880	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	273	822	153	974	35.0	-41	True	AATAAA	-30
PB.7661.1	chr22	+	2409	3	novel_in_catalog	SPECC1L-ADORA2A	novel	6204	20	NA	NA	153026	-5	no_combination_of_known_junctions	FALSE	canonical	1	13329	junction_1	50896.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	412	1239	309	1547	35.0	-8	True	AATAAA	-31
PB.8012.8	chr3	+	3047	14	incomplete-splice_match	GOLGA4	ENST00000361924.6	7772	24	174	42018	13	-226	3prime_fragment	FALSE	canonical	1	37678	junction_2	119652.8003668662	NA	0	NA	TRUE	NA	NA	NA	B	coding	949	2847	201	3047	75.0	13	False	NA	NA
PB.8012.9	chr3	+	2968	14	novel_not_in_catalog	GOLGA4	novel	7772	24	NA	NA	-12	-226	any annotated donor/acceptor	FALSE	canonical	1	2932	junction_11	149896.92117182695	NA	3	NA	TRUE	NA	NA	NA	B	coding	943	2829	140	2968	75.0	74	False	NA	NA
PB.8012.6	chr3	+	3196	15	incomplete-splice_match	GOLGA4	ENST00000356847.8	7673	23	19	42009	0	-223	3prime_fragment	FALSE	canonical	1	187873	junction_2	96853.45290600808	NA	0	NA	TRUE	NA	NA	NA	B	coding	972	2916	281	3196	65.0	0	True	TTTAAA	-1
PB.5765.1	chr19	-	728	2	full-splice_match	GADD45GIP1	ENST00000316939.2	1782	2	8	1046	8	-1046	multi-exon	FALSE	canonical	1	1928702	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	222	669	17	685	20.0	-6	True	AATAAA	-22
PB.8012.4	chr3	+	2987	13	novel_in_catalog	GOLGA4	novel	7772	24	NA	NA	7	-330	combination_of_known_junctions	FALSE	canonical	1	37678	junction_2	147069.26165633282	NA	0	NA	TRUE	NA	NA	NA	B	coding	898	2694	293	2986	55.0	-12	True	NA	NA
PB.8012.5	chr3	+	2239	14	incomplete-splice_match	GOLGA4	ENST00000361924.6	7772	24	83	42917	8	213	3prime_fragment	FALSE	canonical	1	37678	junction_2	119652.8003668662	NA	2	NA	TRUE	NA	NA	NA	B	coding	649	1947	292	2238	65.0	-11	True	NA	NA
PB.8012.2	chr3	+	2043	16	novel_not_in_catalog	GOLGA4	novel	7772	24	NA	NA	-19	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	126943.29093862696	NA	1	1	TRUE	NA	NA	NA	B	coding	602	1806	237	2042	65.0	-43	True	AAAAAG	-6
PB.8012.1	chr3	+	1719	12	incomplete-splice_match	GOLGA4	ENST00000356847.8	7673	23	-39	51245	22	-6	3prime_fragment	FALSE	canonical	1	187873	junction_2	105865.57322104994	NA	0	NA	TRUE	NA	NA	NA	B	coding	460	1380	339	1718	65.0	-125	False	AAAACA	-38
PB.3867.1	chr15	-	1696	3	full-splice_match	LYSMD2	ENST00000267838.6	1759	3	2	61	2	-3	multi-exon	FALSE	canonical	1	181604	junction_2	69302.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	215	648	514	1161	20.0	-3	True	AATAAA	-38
PB.6198.6	chr19	+	2014	8	full-splice_match	ZNF765	ENST00000504235.5	2059	8	4	41	-2	-41	multi-exon	FALSE	canonical	1	24	junction_3	17887.878942491323	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	979	1281	35.0	-1	True	NA	NA
PB.1222.13	chr1	+	2037	7	full-splice_match	GPR137B	ENST00000366592.7	2042	7	2	3	2	-3	multi-exon	FALSE	canonical	1	179295	junction_2	26349.71644639759	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	135	1289	20.0	-19	True	ATTAAA	-45
PB.9771.1	chr6	+	3966	4	intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	10	junction_1	217.7710316415437	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-299	False	NA	NA
PB.383.12	chr1	-	3184	1	novel_in_catalog	PIK3R3	novel	5609	10	NA	NA	13	-63390	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	148	447	3	449	80.0	-1	True	TTTAAA	-29
PB.4725.1	chr17	-	904	4	full-splice_match	GABARAP	ENST00000302386.9	1634	4	323	407	0	-13	multi-exon	FALSE	canonical	1	2908841	junction_3	1158313.3751682036	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	118	471	20.0	-19	True	AATAAA	-19
PB.9903.11	chr6	-	1501	1	novel_in_catalog	AL669918.1	novel	2705	15	NA	NA	11408	-12147	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	1260	False	NA	NA
PB.9903.12	chr6	-	2741	12	full-splice_match	TAP2	ENST00000374897.2	5684	12	-16	2959	-16	570	multi-exon	FALSE	canonical	1	292242	junction_11	138122.43409124113	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	149	2209	15.0	-58	True	CATAAA	-22
PB.9903.13	chr6	-	2509	12	full-splice_match	TAP2	ENST00000374897.2	5684	12	59	3116	6	413	multi-exon	FALSE	canonical	1	292242	junction_11	138122.43409124113	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	74	2134	75.0	-4	True	NA	NA
PB.9903.14	chr6	-	4903	11	novel_in_catalog	AL669918.1	novel	2705	15	NA	NA	53	-14747	intron_retention	FALSE	canonical	1	292242	junction_10	141223.75368502992	NA	3	NA	TRUE	NA	NA	NA	B	coding	298	897	3615	4511	50.0	-31	True	NA	NA
PB.9903.15	chr6	-	2500	12	full-splice_match	TAP2	ENST00000374897.2	5684	12	11	3173	1	356	multi-exon	FALSE	canonical	1	292242	junction_11	138122.43409124113	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	122	2182	30.0	-31	True	AATACA	-10
PB.8129.1	chr3	+	1964	9	full-splice_match	GNAI2	ENST00000422163.5	2407	9	424	19	-21	-14	multi-exon	FALSE	canonical	1	43057	junction_1	1506826.869497823	NA	8	2	TRUE	NA	NA	NA	C	coding	339	1020	409	1428	70.0	-9488	False	NA	NA
PB.6838.1	chr2	-	2490	3	full-splice_match	DLX2	ENST00000234198.8	2453	3	-37	0	-37	0	multi-exon	FALSE	canonical	1	38388	junction_1	4323.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	328	987	400	1386	5.0	-38	False	AATAAA	-17
PB.8129.3	chr3	+	2118	9	full-splice_match	GNAI2	ENST00000313601.10	2464	9	332	14	80	2	multi-exon	FALSE	canonical	1	2369579	junction_8	896619.6991643026	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	53	1120	70.0	80	False	AATAAA	-7
PB.7430.5	chr20	+	3330	22	novel_not_in_catalog	PRPF6	novel	3044	21	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	4668	junction_2	332444.4177638082	NA	1	NA	TRUE	NA	NA	NA	C	coding	882	2649	577	3225	20.0	0	True	ATTAAA	-22
PB.8129.4	chr3	+	1680	9	full-splice_match	GNAI2	ENST00000451956.1	1486	9	-12	-182	-12	-14	multi-exon	FALSE	canonical	1	1594	junction_1	1517870.8616028572	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	188	1144	70.0	-9901	False	NA	NA
PB.7742.17	chr22	-	7401	41	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	2051	-2	any annotated donor/acceptor	FALSE	canonical	1	2008	junction_40	1142340.8950198358	NA	0	NA	TRUE	NA	NA	NA	C	coding	1960	5883	130	6012	15.0	-7	True	AATAAA	-17
PB.7742.16	chr22	-	6956	40	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	73	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1162239.492090416	NA	0	NA	TRUE	NA	NA	NA	C	coding	1915	5748	208	5955	15.0	9	True	AATAAA	-17
PB.7742.13	chr22	-	4963	26	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	63	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	1043565.9432474895	NA	10	1	TRUE	NA	NA	NA	C	coding	1118	3357	218	3574	15.0	-1	True	AATAAA	-17
PB.7742.11	chr22	-	7406	41	full-splice_match	MYH9	ENST00000216181.10	7554	41	66	82	66	-82	multi-exon	FALSE	canonical	1	1396727	junction_40	1055341.6205174795	NA	51	4	TRUE	NA	NA	NA	C	coding	1960	5883	215	6097	20.0	2	True	AATAAA	-16
PB.479.6	chr1	+	2209	12	full-splice_match	ACADM	ENST00000370841.8	2619	12	358	52	0	-52	multi-exon	FALSE	canonical	1	750250	junction_1	114069.89592655117	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	80	1345	45.0	-46	True	AATAAA	-24
PB.7742.18	chr22	-	7103	42	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	111	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1170985.6182343813	NA	11	NA	TRUE	NA	NA	NA	C	coding	1951	5856	170	6025	20.0	10	True	AATAAA	-15
PB.8391.1	chr3	-	2068	4	novel_in_catalog	RPL32P3	novel	1555	3	NA	NA	9	86	combination_of_known_junctions	FALSE	canonical	1	17207	junction_2	41745.5595110293	NA	0	NA	TRUE	NA	NA	NA	B	coding	128	387	1301	1687	30.0	-12	True	AATAAA	-15
PB.9650.7	chr5	-	3668	5	novel_in_catalog	DOK3	novel	2292	6	NA	NA	5	-25	intron_retention	FALSE	canonical	1	37886	junction_4	58464.3966957669	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	213	884	70.0	-4	True	NA	NA
PB.9650.6	chr5	-	3634	6	novel_in_catalog	DOK3	novel	2292	6	NA	NA	-17	-25	combination_of_known_junctions	FALSE	canonical	1	51499	junction_5	50765.53804856203	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	261	1583	70.0	-2	True	NA	NA
PB.9650.1	chr5	-	3740	5	novel_in_catalog	DOK3	novel	2292	6	NA	NA	-16	0	intron_retention	FALSE	canonical	1	51499	junction_4	52672.90540863965	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	260	931	20.0	-1	True	AATAAA	-15
PB.7262.29	chr20	-	5250	3	full-splice_match	RBM12	ENST00000374114.7	6662	3	10	1402	-6	-1	multi-exon	FALSE	canonical	1	290176	junction_2	172395.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	255	3053	25.0	-7	True	ATTAAA	-16
PB.9650.3	chr5	-	4648	4	novel_in_catalog	DOK3	novel	2292	6	NA	NA	-16	-24	intron_retention	FALSE	canonical	1	51499	junction_3	59989.07548508775	NA	5	NA	TRUE	NA	NA	NA	C	coding	154	465	2132	2596	70.0	-1	True	NA	NA
PB.10910.6	chr7	+	2892	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-34	2	-34	-2	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	302	2230	35.0	-13	True	CATAAA	-45
PB.7430.4	chr20	+	4848	19	incomplete-splice_match	PRPF6	ENST00000266079.4	3044	21	-10	1428	-10	-1428	3prime_fragment	FALSE	canonical	1	487560	junction_1	211353.85355245412	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	122	2671	95.0	-7	True	NA	NA
PB.7262.28	chr20	-	5301	3	full-splice_match	RBM12	ENST00000424458.5	1068	3	-11	-4222	0	-86	multi-exon	FALSE	canonical	1	20825	junction_2	307071.0	NA	5	1	TRUE	NA	NA	NA	C	coding	932	2799	207	3005	45.0	-1	True	AATAAA	-19
PB.9650.9	chr5	-	3584	6	full-splice_match	DOK3	ENST00000510898.6	1775	6	7	-1816	-4	-25	multi-exon	FALSE	canonical	1	37886	junction_5	55158.217214119606	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	211	1533	70.0	-2	True	NA	NA
PB.10910.5	chr7	+	5238	6	full-splice_match	ZNF398	ENST00000475153.5	2860	6	-43	-2335	-43	-2	multi-exon	FALSE	canonical	1	67292	junction_1	24651.81213947567	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	311	2239	25.0	-22	True	AATAAA	-30
PB.11098.9	chr8	+	2400	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-1	-13	combination_of_known_junctions	FALSE	canonical	1	21990	junction_1	171463.2157189626	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	58	2304	80.0	-1	True	NA	NA
PB.7162.4	chr20	-	1353	7	full-splice_match	PCNA	ENST00000379160.3	1359	7	-2	8	-2	-8	multi-exon	FALSE	canonical	1	70167	junction_6	1581689.6593120142	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	246	1031	35.0	995	False	AATAAA	-15
PB.7162.3	chr20	-	2349	4	novel_in_catalog	PCNA	novel	1344	6	NA	NA	30	-1	intron_retention	FALSE	canonical	1	2030197	junction_2	1370951.3789434286	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	1649	2020	20.0	7627	False	AATAAA	-22
PB.3877.1	chr15	-	3253	13	novel_not_in_catalog	MYO5C	novel	6971	41	NA	NA	-8438	2	any annotated donor/acceptor	FALSE	canonical	1	474	junction_12	29559.46969058966	NA	1	NA	TRUE	NA	NA	NA	A	coding	533	1602	70	1671	25.0	NA	False	AATAAA	-16
PB.7162.1	chr20	-	3077	3	incomplete-splice_match	PCNA	ENST00000379143.9	1344	6	14	0	14	0	intron_retention	FALSE	canonical	1	2030197	junction_2	1582018.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	2376	2747	15.0	7611	False	AATAAA	-23
PB.9640.1	chr5	+	3105	18	full-splice_match	FGFR4	ENST00000502906.5	2638	18	-55	-412	-27	0	multi-exon	TRUE	canonical	1	59252	junction_1	47370.241390977164	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	229	2637	25.0	-5280	False	AATAAA	-19
PB.8580.8	chr3	-	1922	8	novel_not_in_catalog	TRA2B	novel	2952	9	NA	NA	0	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	971879.4234690488	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	170	961	50.0	-16	True	AATAAA	-9
PB.8580.9	chr3	-	1863	8	full-splice_match	TRA2B	ENST00000382191.4	976	8	74	-961	0	-5	multi-exon	FALSE	canonical	1	64400	junction_7	913980.871668973	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	336	902	50.0	-16	True	AATAAA	-9
PB.8580.2	chr3	-	2827	9	full-splice_match	TRA2B	ENST00000453386.6	2952	9	124	1	1	-1	multi-exon	FALSE	canonical	1	1160323	junction_8	622999.843642223	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	153	1019	20.0	1	True	ATTAAA	-15
PB.8580.3	chr3	-	1955	9	full-splice_match	TRA2B	ENST00000453386.6	2952	9	149	848	0	-5	multi-exon	FALSE	canonical	1	1160323	junction_8	622999.843642223	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	128	994	50.0	-6	True	AATAAA	-9
PB.7552.1	chr21	-	2083	6	novel_not_in_catalog	AP001062.3	novel	704	2	NA	NA	-9035	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	86236.67165284153	NA	3	1	TRUE	NA	NA	NA	A	coding	218	657	174	830	25.0	0	True	AGTAAA	-18
PB.10124.17	chr6	-	1625	11	novel_in_catalog	PNISR	novel	5189	13	NA	NA	3	-12	no_combination_of_known_junctions	FALSE	canonical	1	23761	junction_10	324345.7063181198	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1482	142	1623	75.0	-21	False	AATGAA	-42
PB.8580.7	chr3	-	2174	9	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	-1	-5	no_combination_of_known_junctions	FALSE	canonical	1	1130	junction_3	1052922.423930526	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	731	1069	50.0	-1	True	AATAAA	-9
PB.8580.4	chr3	-	1946	8	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	1	16	combination_of_known_junctions	FALSE	canonical	1	10025	junction_2	968979.7975217997	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	153	959	30.0	1	True	AATAAA	-35
PB.8580.5	chr3	-	7110	9	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	0	-5	intron_retention	FALSE	canonical	1	382168	junction_8	800264.2613569517	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	5583	6149	50.0	-11	True	AATAAA	-9
PB.10415.13	chr7	+	5713	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	4	-381	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	1	NA	TRUE	NA	NA	NA	C	coding	848	2547	640	3186	25.0	4	True	AATAAA	-15
PB.10415.12	chr7	+	4722	11	full-splice_match	AHR	ENST00000242057.8	6276	11	4	1550	4	-1550	multi-exon	FALSE	canonical	1	202168	junction_1	70868.73382112876	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	640	3186	65.0	4	True	NA	NA
PB.10415.11	chr7	+	5571	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	0	-382	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	644	3190	30.0	0	True	AATAAA	-14
PB.10415.10	chr7	+	5716	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	0	-23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	4	NA	TRUE	NA	NA	NA	C	coding	848	2547	644	3190	70.0	0	True	NA	NA
PB.2026.1	chr11	+	2168	7	full-splice_match	ESRRA	ENST00000000442.10	2215	7	47	0	45	0	multi-exon	FALSE	canonical	1	108629	junction_5	100741.93045930113	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	125	1396	30.0	-756	False	AATATA	-14
PB.10415.16	chr7	+	3556	11	full-splice_match	AHR	ENST00000242057.8	6276	11	12	2708	12	-2708	multi-exon	FALSE	canonical	1	202168	junction_1	70868.73382112876	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	632	3178	25.0	12	True	AATAAA	-15
PB.10415.15	chr7	+	5646	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	10	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	0	NA	TRUE	NA	NA	NA	C	coding	848	2547	634	3180	45.0	10	True	NA	NA
PB.2026.2	chr11	+	2330	7	full-splice_match	ESRRA	ENST00000405666.5	2283	7	-51	4	-51	1	multi-exon	FALSE	canonical	1	21430	junction_1	123571.84158842805	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	286	1557	25.0	-205	False	AATATA	-15
PB.10415.18	chr7	+	4816	12	novel_not_in_catalog	AHR	novel	6958	15	NA	NA	617	-382	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	117711.77882459166	NA	1	1	TRUE	NA	NA	NA	C	coding	633	1902	611	2512	30.0	-397	False	AATAAA	-14
PB.1629.1	chr10	+	3507	7	full-splice_match	CNNM2	ENST00000433628.2	3857	7	-38	388	2	-388	multi-exon	TRUE	canonical	1	69805	junction_1	36590.669029139106	NA	7	NA	TRUE	NA	NA	NA	A	coding	841	2526	199	2724	35.0	25	True	AATGAA	-36
PB.8696.2	chr4	-	2728	18	full-splice_match	ACOX3	ENST00000503233.5	2253	18	15	-490	-10	-189	multi-exon	FALSE	canonical	1	83401	junction_17	23256.210164258326	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	136	2238	25.0	-24	True	NA	NA
PB.7429.1	chr20	-	2182	6	novel_in_catalog	SAMD10	novel	2181	5	NA	NA	115	-1	combination_of_known_junctions	FALSE	canonical	1	8355	junction_5	39260.27554462653	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	61	786	5.0	-1	True	AATAAA	-17
PB.7429.3	chr20	-	2104	5	full-splice_match	SAMD10	ENST00000498830.5	823	5	-36	-1245	-36	-2	multi-exon	FALSE	canonical	1	11161	junction_4	42096.047949896674	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	51	434	0.0	-57	False	AATAAA	-16
PB.7429.2	chr20	-	2177	6	novel_not_in_catalog	SAMD10	novel	2181	5	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	canonical	1	5755	junction_5	40208.132757441	NA	4	1	TRUE	NA	NA	NA	C	coding	252	759	24	782	0.0	-30	True	AATAAA	-16
PB.11466.2	chr9	-	3524	16	full-splice_match	PSIP1	ENST00000380733.8	3391	16	47	-180	17	180	multi-exon	FALSE	canonical	1	83844	junction_15	407808.11541102675	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	298	1890	10.0	-3	True	AATAAA	-22
PB.1871.1	chr11	-	2559	7	novel_in_catalog	MPPED2	novel	5591	7	NA	NA	-72	-156	combination_of_known_junctions	FALSE	canonical	1	24888	junction_6	16782.245473681072	NA	2	1	TRUE	NA	NA	NA	A	coding	294	885	434	1318	25.0	-1	True	AATAAA	-15
PB.11466.1	chr9	-	4163	16	full-splice_match	PSIP1	ENST00000380738.8	3364	16	24	-823	18	823	multi-exon	FALSE	canonical	1	122085	junction_8	403870.8799349724	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	294	1886	100.0	-2	True	NA	NA
PB.8696.4	chr4	-	2578	18	full-splice_match	ACOX3	ENST00000356406.9	2860	18	-42	324	-30	106	multi-exon	FALSE	canonical	1	21444	junction_17	33767.091508057	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	121	2223	30.0	-31	False	AGTAAA	-32
PB.1222.17	chr1	+	2009	7	novel_in_catalog	GPR137B	novel	1107	5	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	2218	junction_6	84610.47733519111	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	116	1171	15.0	0	True	ATTAAA	-22
PB.8696.5	chr4	-	2504	18	full-splice_match	ACOX3	ENST00000503233.5	2253	18	-3	-248	-3	-1	multi-exon	FALSE	canonical	1	83401	junction_17	23256.210164258326	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	154	2256	10.0	7461	False	AAGAAA	-23
PB.7568.1	chr21	+	5440	42	full-splice_match	COL18A1	ENST00000400337.6	5436	42	-3	-1	-3	1	multi-exon	FALSE	canonical	1	314724	junction_2	217216.166178123	NA	2	NA	TRUE	NA	NA	NA	C	coding	1339	4020	98	4117	15.0	-31	True	AATAAA	-20
PB.7568.3	chr21	+	4293	42	full-splice_match	COL18A1	ENST00000400337.6	5436	42	5	1138	5	15	multi-exon	FALSE	canonical	1	314724	junction_2	217216.166178123	NA	1	NA	TRUE	NA	NA	NA	C	coding	1339	4020	90	4109	40.0	-23	True	AATAAA	-33
PB.7568.2	chr21	+	4020	39	novel_not_in_catalog	COL18A1	novel	5436	42	NA	NA	-2	16	any annotated donor/acceptor	FALSE	canonical	0	0	junction_32	243606.74692055653	NA	7	1	TRUE	NA	NA	NA	C	coding	991	2976	97	3072	40.0	-30	True	AATAAA	-34
PB.7568.4	chr21	+	3548	40	novel_not_in_catalog	COL18A1	novel	5436	42	NA	NA	11	16	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_39	222129.80417989686	NA	6	2	TRUE	NA	NA	NA	C	coding	1138	3417	84	3500	40.0	-17	True	AATAAA	-34
PB.9800.10	chr6	+	2862	11	novel_in_catalog	BTN3A3	novel	671	4	NA	NA	67	-1	combination_of_known_junctions	FALSE	canonical	1	7982	junction_1	44635.977116671245	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	112	1860	10.0	121	False	AATAAA	-16
PB.7568.6	chr21	+	3528	27	novel_not_in_catalog	COL18A1	novel	5436	42	NA	NA	-16380	0	intron_retention	FALSE	non_canonical	0	0	junction_1	266080.1805710376	NA	3	NA	TRUE	NA	NA	NA	C	coding	524	1575	633	2207	20.0	-4942	False	AATAAA	-18
PB.11932.30	chr9	+	4212	23	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	107	-3	no_combination_of_known_junctions	FALSE	canonical	1	13521	junction_1	111382.70528480614	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	99	3041	30.0	-4301	False	AATAAA	-17
PB.8696.7	chr4	-	2415	17	novel_in_catalog	ACOX3	novel	2860	18	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	30036	junction_2	33575.67713151655	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	133	2007	10.0	-21	True	AAGAAA	-23
PB.6848.8	chr2	+	1697	8	full-splice_match	SCRN3	ENST00000272732.10	3037	8	7	1333	0	-75	multi-exon	FALSE	canonical	1	43957	junction_1	59988.697972949834	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	76	1350	35.0	13	True	ATTAAA	-26
PB.4424.1	chr16	+	3608	19	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	-5	2	any annotated donor/acceptor	FALSE	canonical	1	22381	junction_8	151660.86241787407	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	401	3232	40.0	-21	True	AATAAA	-20
PB.5741.2	chr19	-	2429	4	full-splice_match	ZNF44	ENST00000355684.5	2119	4	4	-314	-3	-203	multi-exon	FALSE	canonical	1	42111	junction_3	21828.886676959857	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	190	2037	80.0	-1	True	NA	NA
PB.4424.3	chr16	+	5395	17	incomplete-splice_match	CYLD	ENST00000569418.5	3513	18	16	-3	-4	2	intron_retention	FALSE	canonical	1	51586	junction_1	116112.71473818486	NA	1	NA	TRUE	NA	NA	NA	C	coding	908	2727	263	2989	40.0	-20	True	AATAAA	-20
PB.4424.2	chr16	+	3542	18	novel_in_catalog	CYLD	novel	777	3	NA	NA	-4	2	no_combination_of_known_junctions	FALSE	canonical	1	4684	junction_17	136249.35249518216	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	263	3166	40.0	-20	True	AATAAA	-20
PB.4424.5	chr16	+	3522	18	novel_in_catalog	CYLD	novel	777	3	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	5369	junction_2	129817.93172092049	NA	2	NA	TRUE	NA	NA	NA	C	coding	953	2862	286	3147	40.0	-16	True	AATAAA	-19
PB.4424.4	chr16	+	4525	18	full-splice_match	CYLD	ENST00000569418.5	3513	18	17	-1029	-3	576	multi-exon	FALSE	canonical	1	51586	junction_1	113318.9079680251	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	262	3123	25.0	-19	True	TATAAA	-23
PB.4424.7	chr16	+	3408	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	130601.14665538899	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	171	3032	40.0	-5	True	AATAAA	-20
PB.4424.6	chr16	+	5226	18	full-splice_match	CYLD	ENST00000569418.5	3513	18	20	-1733	0	-3	multi-exon	FALSE	canonical	1	51586	junction_1	113318.9079680251	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	259	3120	85.0	-16	True	NA	NA
PB.4424.9	chr16	+	3477	18	full-splice_match	CYLD	ENST00000569418.5	3513	18	43	-7	7	6	multi-exon	FALSE	canonical	1	51586	junction_1	113318.9079680251	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	236	3097	30.0	7	True	AATAAA	-24
PB.4424.8	chr16	+	3461	18	novel_in_catalog	CYLD	novel	777	3	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	2740	junction_2	130200.50016389083	NA	1	1	TRUE	NA	NA	NA	C	coding	953	2862	224	3085	40.0	0	True	AATAAA	-20
PB.90.2	chr1	-	8720	58	full-splice_match	MTOR	ENST00000361445.8	8677	58	-44	1	-44	-1	multi-exon	TRUE	canonical	1	105706	junction_57	87619.20815444629	NA	0	NA	TRUE	NA	NA	NA	C	coding	2549	7650	122	7771	20.0	-1	True	AATAAA	-22
PB.11736.4	chr9	+	3115	13	novel_not_in_catalog	PRPF4	novel	3212	14	NA	NA	17	-1	intron_retention	FALSE	canonical	1	15073	junction_10	124608.17905505508	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	86	595	45.0	1	True	ATTAAA	-21
PB.6197.3	chr19	+	5198	5	novel_in_catalog	ZNF525	novel	537	3	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	16297	junction_4	9644.868775027475	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	112	1551	60.0	-11	True	AATAAA	-17
PB.11736.3	chr9	+	3163	13	novel_in_catalog	PRPF4	novel	3212	14	NA	NA	17	-2	intron_retention	FALSE	canonical	1	319146	junction_1	53111.82846199506	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	1048	2049	50.0	1	True	ATTAAA	-20
PB.6963.5	chr2	+	2299	1	novel_in_catalog	CD28	novel	4526	3	NA	NA	111	-25955	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-44	True	NA	NA
PB.5150.38	chr17	+	3035	17	incomplete-splice_match	CLTC	ENST00000269122.7	7760	32	54841	2035	3717	161	5prime_fragment	FALSE	canonical	1	1452506	junction_1	461391.56923454383	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	570	2612	70.0	-9179	False	TTTAAA	-13
PB.5837.1	chr19	+	2228	1	intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	113	342	1673	2014	80.0	1	True	NA	NA
PB.6963.4	chr2	+	3653	4	full-splice_match	CD28	ENST00000324106.8	4812	4	93	1066	93	-1064	multi-exon	FALSE	canonical	1	54191	junction_1	5174.851130440587	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	57	719	35.0	2	True	GATAAA	-28
PB.5150.30	chr17	+	4041	21	novel_in_catalog	CLTC	novel	8587	32	NA	NA	1502	-349	no_combination_of_known_junctions	FALSE	canonical	1	527	junction_1	738197.3969446436	NA	0	NA	TRUE	NA	NA	NA	C	coding	1034	3105	26	3130	55.0	-339	False	AATAAA	-15
PB.11736.1	chr9	+	4026	14	full-splice_match	PRPF4	ENST00000374199.8	3212	14	311	-1125	12	1125	multi-exon	FALSE	canonical	1	319146	junction_1	52511.986912879824	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	91	1656	5.0	-4	True	TTTAAA	-22
PB.10989.7	chr8	-	3123	13	novel_not_in_catalog	LONRF1	novel	3594	12	NA	NA	16	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	65612.76483080907	NA	91	4	TRUE	NA	NA	NA	B	coding	416	1251	687	1937	30.0	30	True	AATAAA	-13
PB.12180.2	chrX	+	2780	13	novel_in_catalog	CSTF2	novel	2074	15	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	186042	junction_8	58263.783495123855	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	37	1665	40.0	-30	True	AATAAA	-26
PB.12180.3	chrX	+	2570	14	full-splice_match	CSTF2	ENST00000372972.6	1958	14	-17	-595	-17	581	multi-exon	FALSE	canonical	1	186042	junction_8	56003.12760972378	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	34	1767	55.0	-27	True	AATAAA	-11
PB.1635.4	chr10	-	2709	4	novel_in_catalog	CALHM2	novel	1843	4	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	1	29832	junction_2	34409.805269234916	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	1376	2347	15.0	-61	False	GATAAA	-16
PB.12180.1	chrX	+	4607	14	full-splice_match	CSTF2	ENST00000372972.6	1958	14	-34	-2615	8	2601	multi-exon	FALSE	canonical	1	186042	junction_8	56003.12760972378	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	51	1784	30.0	-44	False	AAAAAG	-3
PB.1635.2	chr10	-	1884	4	full-splice_match	CALHM2	ENST00000369788.7	1843	4	-40	-1	-40	1	multi-exon	FALSE	canonical	1	45844	junction_3	43076.716559593486	NA	2	NA	TRUE	NA	NA	NA	C	coding	323	972	546	1517	10.0	-35	False	GATAAA	-21
PB.1635.3	chr10	-	1748	3	novel_in_catalog	CALHM2	novel	1843	4	NA	NA	-6	-1	no_combination_of_known_junctions	FALSE	canonical	1	7835	junction_2	49688.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	412	1383	10.0	-1	True	GATAAA	-19
PB.12180.4	chrX	+	4052	12	novel_in_catalog	CSTF2	novel	2074	15	NA	NA	-12	-3	intron_retention	FALSE	canonical	1	186042	junction_7	59879.673262025586	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	29	907	40.0	-22	True	AATAAA	-24
PB.12180.5	chrX	+	1981	14	full-splice_match	CSTF2	ENST00000372972.6	1958	14	-9	-14	-9	0	multi-exon	FALSE	canonical	1	186042	junction_8	56003.12760972378	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	26	1759	40.0	-19	True	AATAAA	-27
PB.6963.1	chr2	+	5558	4	full-splice_match	CD28	ENST00000324106.8	4812	4	93	-839	93	839	multi-exon	FALSE	canonical	1	54191	junction_1	5174.851130440587	NA	3	NA	TRUE	NA	NA	NA	C	coding	220	663	57	719	45.0	2	True	AATAAA	-15
PB.1137.13	chr1	-	1954	4	novel_not_in_catalog	DUSP10	novel	2676	4	NA	NA	184	99	any annotated donor/acceptor	FALSE	canonical	1	2318	junction_3	86948.64774489979	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	145	1593	65.0	1890	False	TTTAAA	-3
PB.1635.8	chr10	-	2468	3	novel_in_catalog	CALHM2	novel	1843	4	NA	NA	-31	-4	combination_of_known_junctions	FALSE	canonical	1	7695	junction_2	49758.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	1138	2109	30.0	-26	False	GATAAA	-13
PB.1635.9	chr10	-	2321	4	novel_not_in_catalog	CALHM2	novel	1843	4	NA	NA	-5	-4	any annotated donor/acceptor	FALSE	canonical	1	4830	junction_2	10600.169086701715	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	1004	1594	30.0	0	True	GATAAA	-13
PB.7516.2	chr21	-	5697	12	novel_not_in_catalog	HLCS	novel	6112	12	NA	NA	-82	0	any annotated donor/acceptor	FALSE	canonical	1	6054	junction_11	47942.33033827687	NA	0	NA	TRUE	NA	NA	NA	B	coding	726	2181	463	2643	5.0	9496	False	AATAAA	-18
PB.6963.3	chr2	+	4717	4	full-splice_match	CD28	ENST00000324106.8	4812	4	93	2	93	0	multi-exon	FALSE	canonical	1	54191	junction_1	5174.851130440587	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	57	719	25.0	2	True	NA	NA
PB.7516.3	chr21	-	4869	11	novel_in_catalog	HLCS	novel	6112	12	NA	NA	-51	-859	combination_of_known_junctions	FALSE	canonical	1	25582	junction_10	33045.69459763254	NA	0	NA	TRUE	NA	NA	NA	B	coding	873	2622	53	2674	25.0	-22	False	AATAAA	-15
PB.8340.1	chr3	+	2883	1	antisense	novelGene_CCDC58_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	118	357	2168	2524	90.0	NA	False	NA	NA
PB.6963.2	chr2	+	3261	4	full-splice_match	CD28	ENST00000324106.8	4812	4	91	1460	91	-1458	multi-exon	FALSE	canonical	1	54191	junction_1	5174.851130440587	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	59	721	40.0	0	True	AATAAA	-30
PB.8900.7	chr4	-	2556	13	full-splice_match	PPP3CA	ENST00000394853.8	3604	13	-243	1291	-10	-301	multi-exon	FALSE	canonical	1	441508	junction_12	113426.6841204289	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	775	2310	70.0	9	True	ATTAAA	-37
PB.11098.4	chr8	+	5157	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	21990	junction_1	170801.37103974182	NA	2	NA	TRUE	NA	NA	NA	C	coding	777	2334	72	2405	100.0	-15	True	NA	NA
PB.10781.13	chr7	-	4410	27	incomplete-splice_match	LAMB1	ENST00000222399.10	5725	34	50	11556	-18	0	3prime_fragment	FALSE	canonical	1	355755	junction_20	168524.37885882115	NA	2	NA	TRUE	NA	NA	NA	C	coding	1409	4227	182	4408	100.0	1217	False	NA	NA
PB.10781.12	chr7	-	5207	32	incomplete-splice_match	LAMB1	ENST00000222399.10	5725	34	41	2412	-27	-2412	3prime_fragment	FALSE	canonical	1	355755	junction_25	293776.3013706053	NA	0	NA	TRUE	NA	NA	NA	C	coding	1672	5016	191	5206	45.0	1208	False	AATATA	-4
PB.7516.1	chr21	-	5725	11	novel_in_catalog	HLCS	novel	6112	12	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	1	25582	junction_10	33045.69459763254	NA	1	NA	TRUE	NA	NA	NA	B	coding	873	2622	50	2671	5.0	-19	False	AATAAA	-18
PB.11736.8	chr9	+	2843	14	novel_not_in_catalog	PRPF4	novel	3212	14	NA	NA	27	-19	any annotated donor/acceptor	FALSE	canonical	1	3265	junction_6	122602.20575156032	NA	4	NA	TRUE	NA	NA	NA	C	coding	513	1542	76	1617	30.0	11	True	TATAAA	-19
PB.10781.14	chr7	-	3731	25	novel_in_catalog	LAMB1	novel	5766	32	NA	NA	5	-39	combination_of_known_junctions	FALSE	canonical	1	15443	junction_1	192033.5806430125	NA	2	1	TRUE	NA	NA	NA	C	coding	1188	3567	159	3725	35.0	-25	True	AATAAA	-14
PB.7516.6	chr21	-	2790	11	novel_in_catalog	HLCS	novel	6112	12	NA	NA	-54	-2941	combination_of_known_junctions	FALSE	canonical	1	25582	junction_10	33045.69459763254	NA	0	NA	TRUE	NA	NA	NA	B	coding	873	2622	56	2677	0.0	-25	False	NA	NA
PB.4416.1	chr16	+	2225	4	full-splice_match	AC007611.1	ENST00000568150.2	826	4	-3	-1396	-3	1396	multi-exon	FALSE	canonical	1	3922	junction_1	628.7454881658308	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-4	True	GATAAA	-36
PB.9195.1	chr5	-	5654	5	full-splice_match	TTC33	ENST00000337702.4	2612	5	31	-3073	1	3073	multi-exon	FALSE	canonical	1	144515	junction_4	25368.78784057291	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	123	911	30.0	-28	True	NA	NA
PB.38.21	chr1	+	2761	6	full-splice_match	TNFRSF14	ENST00000466750.5	2603	6	-236	78	-236	-1	multi-exon	FALSE	canonical	1	410721	junction_3	62799.24745217891	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	1687	2286	5.0	8	True	NA	NA
PB.38.20	chr1	+	1411	7	incomplete-splice_match	TNFRSF14	ENST00000355716.4	1707	8	1204	84	-243	-4	5prime_fragment	FALSE	canonical	1	345281	junction_2	89291.02145357181	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	379	939	5.0	1	True	NA	NA
PB.3869.5	chr15	+	4329	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	7	3919	7	682	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	275	1333	30.0	-149	False	ATTAAA	-15
PB.3869.4	chr15	+	2212	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	23	6020	23	-1419	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	259	1317	40.0	-13	True	AATAAA	-18
PB.1883.1	chr11	+	3337	8	incomplete-splice_match	KIAA1549L	ENST00000321505.8	11678	20	64374	4165	64318	-4165	5prime_fragment	FALSE	canonical	1	43923	junction_5	5965.261025474142	NA	0	NA	TRUE	NA	NA	NA	A	coding	478	1437	118	1554	25.0	NA	False	AATAAA	-12
PB.3869.6	chr15	+	4441	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	24	3790	24	811	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	258	1316	30.0	-12	True	AATAAA	-23
PB.3869.1	chr15	+	4592	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	8	3655	8	946	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	274	1332	15.0	-148	False	TATAAA	-15
PB.7516.4	chr21	-	4208	11	novel_in_catalog	HLCS	novel	6112	12	NA	NA	-50	-1519	combination_of_known_junctions	FALSE	canonical	1	25582	junction_10	33045.69459763254	NA	0	NA	TRUE	NA	NA	NA	B	coding	873	2622	52	2673	50.0	-21	False	ATTAAA	-8
PB.3869.3	chr15	+	3937	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	3	4315	3	286	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	279	1337	45.0	2	True	ATTAAA	-16
PB.3869.2	chr15	+	2521	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	1	5733	1	-1132	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	4	NA	TRUE	NA	NA	NA	C	coding	352	1059	281	1339	45.0	0	True	AATAAA	-22
PB.8344.26	chr3	-	2422	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-13	4421	4	-266	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	191	1807	25.0	-5	True	ATTAAA	-20
PB.8344.25	chr3	-	2501	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	-3	-76	combination_of_known_junctions	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	80	1696	15.0	-12	True	NA	NA
PB.7516.5	chr21	-	4077	11	novel_in_catalog	HLCS	novel	6112	12	NA	NA	-1	-1472	combination_of_known_junctions	FALSE	canonical	1	22721	junction_10	33710.76282509786	NA	0	NA	TRUE	NA	NA	NA	B	coding	726	2181	315	2495	85.0	-19	True	AAAAAG	-42
PB.3869.8	chr15	+	1715	10	full-splice_match	TMOD3	ENST00000308580.11	8255	10	28	6512	28	-1911	multi-exon	FALSE	canonical	1	381089	junction_1	89987.8554695021	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	254	1312	20.0	-8	True	CATAAA	-20
PB.8344.21	chr3	-	2769	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-4	4065	2	90	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	182	1798	45.0	4	True	AATAAA	-23
PB.10989.8	chr8	-	3148	13	novel_not_in_catalog	LONRF1	novel	3594	12	NA	NA	12	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	65612.76483080907	NA	0	NA	TRUE	NA	NA	NA	B	coding	416	1251	712	1962	30.0	26	True	AATAAA	-13
PB.433.10	chr1	-	3493	9	full-splice_match	DHCR24	ENST00000649007.1	4309	9	23	793	23	-78	multi-exon	FALSE	canonical	1	1644710	junction_4	156953.3882598091	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	130	1680	60.0	-19	False	NA	NA
PB.11850.14	chr9	-	4564	13	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	315901.62618487736	NA	4	NA	TRUE	NA	NA	NA	C	coding	473	1422	188	1609	10.0	4	True	AATAAA	-13
PB.11850.10	chr9	-	5062	16	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-25	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	314609.56833202357	NA	3	NA	TRUE	NA	NA	NA	C	coding	551	1656	48	1703	10.0	0	True	AATAAA	-20
PB.11850.12	chr9	-	5349	16	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	1	17745	junction_7	340164.92449643044	NA	3	NA	TRUE	NA	NA	NA	C	coding	583	1752	244	1995	10.0	1	True	AATAAA	-15
PB.4060.5	chr15	+	6165	2	full-splice_match	AEN	ENST00000557787.1	1242	2	17	-4940	-16	0	multi-exon	FALSE	canonical	1	196682	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	94	699	10.0	13	True	AATAAA	-18
PB.4060.4	chr15	+	3061	4	full-splice_match	AEN	ENST00000332810.3	3117	4	53	3	12	-2	multi-exon	FALSE	canonical	1	196682	junction_1	49911.98436136244	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	99	1076	10.0	8	True	AATAAA	-16
PB.4060.7	chr15	+	2868	5	novel_not_in_catalog	AEN	novel	3117	4	NA	NA	-14	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	123477.29500296805	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	92	1069	15.0	15	True	AATAAA	-13
PB.4060.6	chr15	+	3367	1	novel_in_catalog	AEN	novel	3117	4	NA	NA	-15	-1458	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	2	313	65.0	14	True	NA	NA
PB.4060.1	chr15	+	3588	1	novel_in_catalog	AEN	novel	3117	4	NA	NA	0	-1296	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	115	348	25	372	55.0	0	True	NA	NA
PB.841.20	chr1	+	1579	2	incomplete-splice_match	IFI16	ENST00000447473.6	951	5	913	707	-10	-668	intron_retention	FALSE	canonical	1	882902	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	275	604	35.0	-19	True	NA	NA
PB.4060.3	chr15	+	3694	3	incomplete-splice_match	AEN	ENST00000332810.3	3117	4	53	1	12	0	intron_retention	FALSE	canonical	1	196682	junction_1	54835.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	99	899	10.0	8	True	AATAAA	-18
PB.4060.2	chr15	+	3045	5	novel_not_in_catalog	AEN	novel	3117	4	NA	NA	18	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	123477.29500296805	NA	7	NA	TRUE	NA	NA	NA	C	coding	325	978	134	1111	10.0	18	True	AATAAA	-16
PB.6867.1	chr2	-	5739	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	233	3	233	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	665	1998	33	2030	30.0	6	True	TATAAA	-45
PB.12336.2	chrX	-	5045	27	full-splice_match	L1CAM	ENST00000370055.5	4655	27	-26	-364	-6	-75	multi-exon	FALSE	canonical	1	63855	junction_26	63599.669298431276	NA	1	1	TRUE	NA	NA	NA	C	coding	1248	3747	225	3971	70.0	-39	True	NA	NA
PB.11923.1	chr9	+	2489	14	full-splice_match	NDOR1	ENST00000344894.10	1794	14	-103	-592	-10	-1	multi-exon	FALSE	canonical	1	107550	junction_10	33676.42370610538	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	104	1897	15.0	-28	True	AGTAAA	-20
PB.4060.9	chr15	+	3462	4	novel_in_catalog	AEN	novel	3117	4	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	1	17448	junction_1	134335.73097860283	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	494	1471	20.0	-2091	False	AATAAA	-22
PB.12336.6	chrX	-	4964	27	novel_not_in_catalog	L1CAM	novel	5004	26	NA	NA	1	-186	any annotated donor/acceptor	FALSE	canonical	1	3788	junction_9	81293.3292377165	NA	0	NA	TRUE	NA	NA	NA	C	coding	1271	3816	186	4001	65.0	0	True	NA	NA
PB.12336.5	chrX	-	4942	27	full-splice_match	L1CAM	ENST00000370055.5	4655	27	-30	-257	-10	-182	multi-exon	FALSE	canonical	1	63855	junction_26	63599.669298431276	NA	0	NA	TRUE	NA	NA	NA	C	coding	1248	3747	229	3975	80.0	-43	True	NA	NA
PB.6812.23	chr2	-	4674	2	full-splice_match	IFIH1	ENST00000421365.2	1617	2	-1	-3056	-1	3056	multi-exon	FALSE	canonical	1	309779	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	379	1044	10.0	-3	True	ATTAAA	-19
PB.7189.1	chr20	+	2427	5	full-splice_match	ZNF133	ENST00000401790.5	2642	5	214	1	-8	-1	multi-exon	FALSE	canonical	1	1811	junction_1	38624.54513890746	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	286	2250	10.0	-7424	False	AATAAA	-22
PB.4070.6	chr15	-	1826	6	full-splice_match	AP3S2	ENST00000336418.8	5891	6	360	3705	-1	678	multi-exon	FALSE	canonical	1	343040	junction_5	49534.1777345703	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	34	615	10.0	11	True	AATACA	-19
PB.4070.7	chr15	-	2383	4	incomplete-splice_match	AP3S2	ENST00000560251.1	573	6	-46	9776	5	-9776	3prime_fragment	FALSE	canonical	1	38799	junction_1	189394.09780842345	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	75	449	45.0	-30	True	NA	NA
PB.4070.4	chr15	-	2599	6	full-splice_match	AP3S2	ENST00000336418.8	5891	6	333	2959	-15	1424	multi-exon	FALSE	canonical	1	343040	junction_5	49534.1777345703	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	61	642	20.0	-16	True	AATAAA	-21
PB.4070.5	chr15	-	1955	7	full-splice_match	AP3S2	ENST00000423566.6	1262	7	-15	-678	2	678	multi-exon	FALSE	canonical	1	32498	junction_3	183929.98149748906	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	44	418	10.0	1	True	AATACA	-19
PB.4070.2	chr15	-	5578	6	full-splice_match	AP3S2	ENST00000336418.8	5891	6	311	2	-3	-2	multi-exon	FALSE	canonical	1	343040	junction_5	49534.1777345703	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	83	664	35.0	-38	False	NA	NA
PB.4070.3	chr15	-	2699	7	novel_in_catalog	AP3S2	novel	5891	6	NA	NA	1	1425	combination_of_known_junctions	FALSE	canonical	1	20263	junction_6	205891.7309829098	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	2	415	20.0	0	True	AATAAA	-22
PB.4070.1	chr15	-	3100	7	novel_not_in_catalog	AP3S2	novel	5891	6	NA	NA	-15	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	159061.6236058808	NA	10	NA	TRUE	NA	NA	NA	C	coding	193	582	61	642	35.0	-16	True	NA	NA
PB.7230.9	chr20	+	2241	18	full-splice_match	TM9SF4	ENST00000398022.6	3978	18	211	1526	0	145	multi-exon	FALSE	canonical	1	168870	junction_1	124571.49056141234	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	76	1953	10.0	-13	True	AAGAAA	-39
PB.7230.8	chr20	+	2526	1	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	0	-29364	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-13	True	NA	NA
PB.7189.4	chr20	+	2303	5	full-splice_match	ZNF133	ENST00000628216.2	2318	5	18	-3	0	0	multi-exon	FALSE	canonical	1	4085	junction_2	36896.147932406166	NA	1	1	TRUE	NA	NA	NA	C	coding	654	1965	161	2125	15.0	2	True	AATAAA	-23
PB.10411.19	chr7	-	2749	13	full-splice_match	ETV1	ENST00000405218.6	3391	13	256	386	-15	-386	multi-exon	FALSE	non_canonical	0	0	junction_4	62523.85485467838	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	217	1650	10.0	4	True	TATAAA	-15
PB.10411.18	chr7	-	3171	13	full-splice_match	ETV1	ENST00000405218.6	3391	13	220	0	-51	0	multi-exon	FALSE	non_canonical	0	0	junction_4	62523.85485467838	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	253	1686	15.0	171	False	TTTAAA	-6
PB.7230.1	chr20	+	3755	18	full-splice_match	TM9SF4	ENST00000398022.6	3978	18	220	3	-2	-3	multi-exon	FALSE	canonical	1	168870	junction_1	124571.49056141234	NA	14	1	TRUE	NA	NA	NA	C	coding	625	1878	67	1944	15.0	-4	True	AATAAA	-16
PB.10411.16	chr7	-	2974	12	novel_not_in_catalog	ETV1	novel	6740	14	NA	NA	-34	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	75261.98928086074	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	65	1483	0.0	0	True	TTTAAA	-12
PB.7230.3	chr20	+	3724	18	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	25155	junction_3	176031.77115073195	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	263	1912	15.0	-16	True	AATAAA	-17
PB.7230.2	chr20	+	3867	18	novel_not_in_catalog	TM9SF4	novel	3978	18	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	218522.78537275176	NA	12	1	TRUE	NA	NA	NA	C	coding	483	1452	79	1530	15.0	-16	True	AATAAA	-17
PB.7230.5	chr20	+	3683	17	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	11756	junction_12	180890.40241637855	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	78	1871	15.0	-15	True	AATAAA	-17
PB.7230.4	chr20	+	2980	1	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	-3	-28913	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-16	True	NA	NA
PB.7230.7	chr20	+	3652	17	novel_in_catalog	TM9SF4	novel	3978	18	NA	NA	-1	-2	no_combination_of_known_junctions	FALSE	canonical	1	2098	junction_1	161928.91323402483	NA	7	1	TRUE	NA	NA	NA	C	coding	600	1803	38	1840	15.0	-14	True	AATAAA	-17
PB.7230.6	chr20	+	3505	16	novel_not_in_catalog	TM9SF4	novel	3978	18	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	7518	junction_6	188135.25752897392	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	662	1696	15.0	-15	True	AATAAA	-14
PB.465.45	chr1	-	2501	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-46	-834	-3	352	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	119	1327	25.0	-1	True	TATAAA	-18
PB.8397.46	chr3	+	3397	26	incomplete-splice_match	ATP2C1	ENST00000428331.6	4795	27	35880	1158	417	650	5prime_fragment	FALSE	canonical	1	497041	junction_8	182403.2799339047	NA	8	1	TRUE	NA	NA	NA	C	coding	903	2712	44	2755	30.0	-1482	False	AGTAAA	-15
PB.1893.8	chr11	+	4053	8	novel_in_catalog	CD44	novel	4589	9	NA	NA	-2	-7	no_combination_of_known_junctions	FALSE	canonical	1	1199	junction_4	1132539.566537928	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	137	991	40.0	-3	True	ATTAAA	-25
PB.1893.9	chr11	+	2822	9	full-splice_match	CD44	ENST00000263398.10	4589	9	298	1469	-2	906	multi-exon	FALSE	canonical	1	1917379	junction_1	488062.8304129372	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	137	1222	70.0	-3	True	NA	NA
PB.1130.1	chr1	-	2374	9	full-splice_match	BPNT1	ENST00000322067.11	2465	9	29	62	3	-60	multi-exon	FALSE	canonical	1	251573	junction_5	71572.12311673799	NA	4	NA	TRUE	NA	NA	NA	C	coding	308	927	148	1074	20.0	-37	True	ATTAAA	-21
PB.1893.4	chr11	+	1353	9	full-splice_match	CD44	ENST00000263398.10	4589	9	304	2932	3	2	multi-exon	FALSE	canonical	1	1917379	junction_1	488062.8304129372	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	131	1216	0.0	3	True	CATAAA	-16
PB.1893.5	chr11	+	1737	1	novel_in_catalog	CD44	novel	4589	9	NA	NA	-49	-36253	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	533	865	70.0	-8509	False	NA	NA
PB.1893.6	chr11	+	4261	8	novel_in_catalog	CD44	novel	4589	9	NA	NA	-48	-7	no_combination_of_known_junctions	FALSE	canonical	1	6456	junction_3	1087104.4703434412	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	183	1199	40.0	-8508	False	ATTAAA	-25
PB.1893.7	chr11	+	2147	10	full-splice_match	CD44	ENST00000434472.6	1634	10	-153	-360	-30	-1	multi-exon	FALSE	canonical	1	71892	junction_5	1181836.1701744734	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	165	1454	10.0	-8490	False	AATAAA	-23
PB.6736.20	chr2	+	4802	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	24	-137	combination_of_known_junctions	FALSE	canonical	1	38885	junction_1	107850.59096350311	NA	1	NA	TRUE	NA	NA	NA	C	coding	1536	4611	124	4734	25.0	35	True	AATAAA	-15
PB.1893.1	chr11	+	4171	9	full-splice_match	CD44	ENST00000263398.10	4589	9	413	5	-3	-5	multi-exon	FALSE	canonical	1	1917379	junction_1	488062.8304129372	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	22	1107	40.0	-8347	False	ATTAAA	-27
PB.1893.2	chr11	+	4423	10	full-splice_match	CD44	ENST00000434472.6	1634	10	-123	-2666	0	-70	multi-exon	FALSE	canonical	1	71892	junction_5	1181836.1701744734	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	135	1424	35.0	-1	True	NA	NA
PB.1893.3	chr11	+	1914	9	full-splice_match	CD44	ENST00000263398.10	4589	9	299	2376	-1	-1	multi-exon	FALSE	canonical	1	1917379	junction_1	488062.8304129372	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	136	1221	10.0	-2	True	AATAAA	-23
PB.10087.8	chr6	-	2030	15	incomplete-splice_match	CEP162	ENST00000403245.7	5156	27	17	50579	-1	-48	3prime_fragment	FALSE	canonical	1	27984	junction_14	12881.56362910234	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1932	99	2030	60.0	-4	True	ATTAAA	-22
PB.6313.2	chr2	-	2252	13	full-splice_match	PDIA6	ENST00000272227.7	2338	13	60	26	-30	-24	multi-exon	FALSE	canonical	1	2355670	junction_11	699352.1366059488	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	89	1411	65.0	23	False	NA	NA
PB.6867.3	chr2	-	4439	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	229	1307	229	-1307	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	665	1998	37	2034	25.0	2	True	ATTAAA	-19
PB.8397.43	chr3	+	3369	27	full-splice_match	ATP2C1	ENST00000428331.6	4795	27	-98	1524	-11	284	multi-exon	FALSE	canonical	1	304847	junction_1	201649.93089133644	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	334	3093	30.0	-149	False	ATTAAA	-13
PB.11932.22	chr9	+	2075	14	novel_in_catalog	EHMT1	novel	5137	27	NA	NA	-46	-7	no_combination_of_known_junctions	FALSE	canonical	1	7222	junction_13	120648.52087514769	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	252	1946	50.0	-4454	False	NA	NA
PB.6313.3	chr2	-	2921	12	novel_in_catalog	PDIA6	novel	2338	13	NA	NA	17	0	intron_retention	FALSE	canonical	1	2355670	junction_10	729506.3590239387	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	127	1434	25.0	-15	True	AATAAA	-14
PB.8397.42	chr3	+	3169	27	full-splice_match	ATP2C1	ENST00000504948.5	4714	27	27	1518	23	290	multi-exon	FALSE	canonical	1	53219	junction_1	228071.19362707945	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	176	2887	30.0	0	True	ATTAAA	-19
PB.6240.2	chr19	+	2790	2	full-splice_match	TRAPPC2B	ENST00000543226.1	732	2	12	-2070	12	2070	multi-exon	FALSE	canonical	1	195140	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	140	423	201	623	95.0	-28	True	NA	NA
PB.6240.1	chr19	+	1983	4	full-splice_match	ZNF547	ENST00000282282.3	2739	4	-69	825	20	-825	multi-exon	FALSE	canonical	1	9364	junction_1	8062.3821679589355	NA	0	NA	TRUE	NA	NA	NA	A	coding	402	1209	220	1428	25.0	-54	True	AAAACA	-45
PB.1130.5	chr1	-	2231	9	novel_in_catalog	BPNT1	novel	2379	8	NA	NA	3	2	intron_retention	FALSE	canonical	1	32617	junction_8	128721.97063772514	NA	2	NA	TRUE	NA	NA	NA	C	coding	308	927	190	1116	20.0	-37	True	AATAAA	-13
PB.2813.19	chr12	+	2464	14	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	-8	intron_retention	FALSE	canonical	1	6361	junction_5	155412.48667165535	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1686	778	2463	70.0	-3	True	NA	NA
PB.2813.18	chr12	+	2953	13	full-splice_match	VEZT	ENST00000547997.5	3002	13	47	2	0	0	multi-exon	FALSE	canonical	1	99045	junction_2	114608.58859938486	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	261	2456	15.0	-3	True	AATAAA	-16
PB.10766.8	chr7	-	2726	5	novel_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	-14	1764	no_combination_of_known_junctions	FALSE	canonical	1	868	junction_1	16967.34579088609	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-23	True	AATAAA	-22
PB.1007.1	chr1	+	1344	5	full-splice_match	RGS2	ENST00000235382.6	1354	5	0	10	0	-10	multi-exon	FALSE	canonical	1	1044738	junction_1	153435.14428476777	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	32	667	30.0	0	True	AATAAA	-23
PB.7057.8	chr2	+	2196	22	novel_in_catalog	SP100	novel	3882	25	NA	NA	-32	-4	combination_of_known_junctions	FALSE	canonical	1	40055	junction_1	276271.1187046968	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	109	2100	25.0	-56	False	CATAAA	-13
PB.7057.9	chr2	+	2038	16	novel_in_catalog	SP100	novel	3882	25	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	6788	junction_2	261385.00613474796	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	299	1633	40.0	-56	False	NA	NA
PB.2813.11	chr12	+	2893	12	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	14412	junction_2	168333.8742024805	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	53	1840	15.0	-12	True	AATAAA	-16
PB.2813.10	chr12	+	4436	12	full-splice_match	VEZT	ENST00000436874.5	4562	12	35	91	1	-91	multi-exon	FALSE	canonical	1	192726	junction_2	100825.50365838468	NA	1	1	TRUE	NA	NA	NA	C	coding	779	2340	71	2410	35.0	-522	False	NA	NA
PB.2813.13	chr12	+	2898	12	novel_in_catalog	VEZT	novel	571	6	NA	NA	4	-1	intron_retention	FALSE	canonical	1	156688	junction_5	107207.03204062072	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	49	2400	10.0	-8	True	AATAAA	-17
PB.2813.12	chr12	+	2268	11	novel_in_catalog	VEZT	novel	571	6	NA	NA	0	-7	intron_retention	FALSE	canonical	1	14412	junction_2	138580.78816401644	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2214	53	2266	70.0	-12	True	NA	NA
PB.2813.15	chr12	+	2925	13	novel_in_catalog	VEZT	novel	571	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	6361	junction_4	151539.67169129525	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	563	2428	15.0	-5	True	AATAAA	-16
PB.2813.14	chr12	+	3063	14	novel_not_in_catalog	VEZT	novel	571	6	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	162978.69733406897	NA	12	3	TRUE	NA	NA	NA	C	coding	625	1878	691	2568	20.0	-6	True	AATAAA	-14
PB.2813.17	chr12	+	2882	12	full-splice_match	VEZT	ENST00000436874.5	4562	12	61	1619	-1	-1	multi-exon	FALSE	canonical	1	192726	junction_2	100825.50365838468	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	45	2384	10.0	-4	True	AATAAA	-17
PB.2813.16	chr12	+	2349	12	full-splice_match	VEZT	ENST00000436874.5	4562	12	60	2153	-2	3	multi-exon	FALSE	canonical	1	192726	junction_2	100825.50365838468	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2304	46	2349	70.0	-5	True	NA	NA
PB.9002.30	chr4	-	3125	9	incomplete-splice_match	INPP4B	ENST00000512630.5	2953	25	108834	124304	-201	31491	internal_fragment	FALSE	canonical	1	108169	junction_2	26972.28245810873	NA	1	NA	TRUE	NA	NA	NA	B	coding	202	609	557	1165	85.0	397	False	NA	NA
PB.5550.4	chr19	-	2680	13	novel_in_catalog	MED16	novel	3420	15	NA	NA	6	1	intron_retention	FALSE	canonical	1	9795	junction_6	162491.15327474155	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	476	2269	0.0	-1	True	AATAAA	-17
PB.4832.20	chr17	-	7020	12	novel_in_catalog	USP22	novel	5220	13	NA	NA	68	-170	intron_retention	FALSE	canonical	1	850889	junction_11	311454.0442204479	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	137	1009	80.0	36	True	NA	NA
PB.5550.2	chr19	-	2851	14	novel_in_catalog	MED16	novel	3420	15	NA	NA	6	2	intron_retention	TRUE	canonical	1	9795	junction_6	125564.83582991728	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2319	121	2439	0.0	-1	True	AATAAA	-18
PB.5550.3	chr19	-	2871	14	novel_not_in_catalog	MED16	novel	3420	15	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_13	160235.92822478723	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	128	2383	0.0	-9	True	AATAAA	-17
PB.5550.1	chr19	-	2918	14	novel_in_catalog	MED16	novel	3420	15	NA	NA	-1	2	intron_retention	FALSE	canonical	1	14259	junction_11	127718.78495623979	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	506	2506	0.0	-11	True	AATAAA	-18
PB.4553.10	chr16	+	3179	5	novel_not_in_catalog	ZFP1	novel	1457	4	NA	NA	12	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	35874.761806700546	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	142	1281	20.0	22	True	AATAAA	-13
PB.4553.11	chr16	+	3245	4	full-splice_match	ZFP1	ENST00000567481.1	493	4	3	-2755	3	81	multi-exon	FALSE	canonical	1	1705	junction_3	27853.937236153088	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	440	1498	50.0	530	False	NA	NA
PB.4832.29	chr17	-	4512	12	novel_in_catalog	USP22	novel	5220	13	NA	NA	67	-504	no_combination_of_known_junctions	FALSE	canonical	1	15161	junction_11	484897.91770828905	NA	10	1	TRUE	NA	NA	NA	C	coding	420	1263	320	1582	10.0	35	True	NA	NA
PB.4832.28	chr17	-	3519	3	novel_not_in_catalog	USP22	novel	5220	13	NA	NA	80	-171	intron_retention	FALSE	non_canonical	0	0	junction_1	425444.5	NA	4	1	TRUE	NA	NA	NA	C	coding	112	339	125	463	75.0	48	True	NA	NA
PB.7134.2	chr20	+	2142	4	novel_not_in_catalog	STK35	novel	6685	4	NA	NA	41	-6	any annotated donor/acceptor	FALSE	canonical	1	5150	junction_3	63690.80632939804	NA	1	NA	TRUE	NA	NA	NA	B	coding	362	1089	59	1147	30.0	-6	True	AATAAA	-37
PB.5454.13	chr18	+	4967	24	novel_not_in_catalog	FHOD3	novel	4967	25	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	387	junction_2	39635.544854976455	NA	3	NA	TRUE	NA	NA	NA	C	coding	1439	4320	123	4442	40.0	1	True	AATAAA	-15
PB.730.4	chr1	-	2137	9	novel_not_in_catalog	CTSS	novel	4107	8	NA	NA	17	9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	566330.3909064478	NA	2	1	TRUE	NA	NA	NA	C	coding	331	996	80	1075	25.0	-4	True	NA	NA
PB.8305.14	chr3	-	3800	1	novel_in_catalog	NAA50	novel	6135	5	NA	NA	6	-18925	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-3	True	NA	NA
PB.10087.6	chr6	-	2551	19	incomplete-splice_match	CEP162	ENST00000403245.7	5156	27	22	38957	4	11574	3prime_fragment	FALSE	canonical	1	27984	junction_18	11754.007567161461	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2457	94	2550	65.0	1	True	NA	NA
PB.6313.8	chr2	-	1612	13	full-splice_match	PDIA6	ENST00000272227.7	2338	13	45	681	40	-211	multi-exon	FALSE	canonical	1	2355670	junction_11	699352.1366059488	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	104	1426	25.0	8	True	AAGAAA	-11
PB.8305.13	chr3	-	4251	1	novel_in_catalog	NAA50	novel	6135	5	NA	NA	0	-18480	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-9	True	NA	NA
PB.9811.1	chr6	-	1954	1	full-splice_match	GPR89P	ENST00000407924.2	1495	1	0	-459	0	459	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	99	300	636	935	60.0	NA	False	AATAAA	-22
PB.6867.5	chr2	-	3224	1	full-splice_match	TTC30A	ENST00000355689.5	5975	1	230	2521	230	-2521	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	665	1998	36	2033	20.0	3	True	AAGAAA	-19
PB.7906.1	chr3	+	9712	58	full-splice_match	ITPR1	ENST00000456211.8	9506	58	-104	-102	0	1	multi-exon	FALSE	non_canonical	0	0	junction_25	73639.75667289186	NA	14	NA	TRUE	NA	NA	NA	C	coding	2695	8088	351	8438	15.0	0	True	AATAAA	-14
PB.5041.1	chr17	-	3479	4	novel_in_catalog	CCDC43	novel	721	3	NA	NA	-1	2	intron_retention	FALSE	canonical	1	278264	junction_3	36564.18244979945	NA	1	NA	TRUE	NA	NA	NA	C	coding	153	462	28	489	15.0	-19	True	AATAAA	-42
PB.4066.12	chr15	+	4617	37	novel_in_catalog	FANCI	novel	4713	37	NA	NA	4	2	no_combination_of_known_junctions	FALSE	canonical	1	7369	junction_9	142064.3638437286	NA	3	1	TRUE	NA	NA	NA	C	coding	966	2901	1045	3945	15.0	0	True	AATAAA	-16
PB.4066.11	chr15	+	4688	38	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	18152	junction_23	136451.90065514034	NA	3	2	TRUE	NA	NA	NA	C	coding	1314	3945	75	4019	15.0	0	True	AATAAA	-13
PB.5041.2	chr17	-	2109	5	full-splice_match	CCDC43	ENST00000315286.12	2082	5	-35	8	-18	-8	multi-exon	FALSE	canonical	1	278264	junction_4	33807.77477149302	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	45	719	60.0	-36	True	AATAAA	-14
PB.5041.5	chr17	-	1917	5	full-splice_match	CCDC43	ENST00000315286.12	2082	5	-48	213	-31	-188	multi-exon	FALSE	canonical	1	278264	junction_4	33807.77477149302	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	58	732	50.0	60	False	NA	NA
PB.5041.4	chr17	-	1994	5	full-splice_match	CCDC43	ENST00000315286.12	2082	5	-16	104	1	-79	multi-exon	FALSE	canonical	1	278264	junction_4	33807.77477149302	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	26	700	70.0	-17	True	NA	NA
PB.4066.15	chr15	+	3772	36	novel_in_catalog	FANCI	novel	4713	37	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	12005	junction_22	141223.01567987842	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3642	109	3750	10.0	0	True	AATAAA	-22
PB.4066.14	chr15	+	4094	38	novel_in_catalog	FANCI	novel	4713	37	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	28077	junction_1	125975.50313800549	NA	3	1	TRUE	NA	NA	NA	C	coding	1328	3987	86	4072	10.0	0	True	AATAAA	-22
PB.197.7	chr1	+	1583	5	full-splice_match	HMGN2	ENST00000460563.5	1045	5	0	-538	0	0	multi-exon	FALSE	canonical	1	3908	junction_4	430716.3791594766	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	388	798	15.0	0	True	AATAAA	-22
PB.197.6	chr1	+	3029	2	full-splice_match	HMGN2	ENST00000493418.1	1496	2	-923	-610	0	0	multi-exon	FALSE	canonical	1	111477	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	121	366	1389	1754	15.0	-728	False	AATAAA	-22
PB.4066.19	chr15	+	4115	38	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	860	junction_16	136979.55226963008	NA	6	1	TRUE	NA	NA	NA	C	coding	741	2226	1868	4093	10.0	6	True	AATAAA	-22
PB.4066.18	chr15	+	4879	39	novel_in_catalog	FANCI	novel	4713	37	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	142276.46956794173	NA	1	NA	TRUE	NA	NA	NA	C	coding	1328	3987	220	4206	15.0	6	True	AATAAA	-17
PB.197.3	chr1	+	1785	4	full-splice_match	HMGN2	ENST00000479815.5	1030	4	-13	-742	0	0	multi-exon	FALSE	canonical	1	3908	junction_3	495561.30422268534	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	590	1000	15.0	-1	True	AATAAA	-22
PB.2700.12	chr12	+	2795	21	full-splice_match	MARS	ENST00000262027.9	2905	21	114	-4	3	-2	multi-exon	FALSE	canonical	1	865817	junction_2	282344.1679313387	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	21	2723	20.0	0	True	AATAAA	-23
PB.197.1	chr1	+	2494	4	novel_in_catalog	HMGN2	novel	320	4	NA	NA	-30	-1	intron_retention	FALSE	canonical	1	3908	junction_3	132321.7773938465	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	1300	1710	15.0	-31	True	AATAAA	-21
PB.773.6	chr1	-	1204	4	full-splice_match	JTB	ENST00000368589.5	1216	4	11	1	6	-1	multi-exon	FALSE	canonical	1	2407998	junction_3	348517.65209272003	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	685	1038	10.0	24	True	AATAAA	-14
PB.5782.18	chr19	+	2272	16	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	345478.67477933987	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	81	1232	20.0	0	True	ATTAAA	-12
PB.2700.13	chr12	+	2997	22	novel_in_catalog	MARS	novel	3592	23	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	1	32947	junction_21	386580.44446026103	NA	0	NA	TRUE	NA	NA	NA	C	coding	899	2700	21	2720	10.0	0	True	NA	NA
PB.11789.15	chr9	-	2472	9	novel_not_in_catalog	HSPA5	novel	3908	8	NA	NA	-12	-1395	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1555374.6812638456	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	217	2181	20.0	0	True	AATAAA	-13
PB.5782.11	chr19	+	2998	20	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	-2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	338302.79932349187	NA	2	1	TRUE	NA	NA	NA	C	coding	566	1701	83	1783	20.0	-2	True	ATTAAA	-12
PB.2700.14	chr12	+	2719	20	novel_in_catalog	MARS	novel	3592	23	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	20514	junction_4	407011.6731319479	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	647	2647	20.0	0	True	AATAAA	-23
PB.5782.13	chr19	+	2642	18	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	333736.7074759366	NA	1	1	TRUE	NA	NA	NA	C	coding	447	1344	82	1425	15.0	-1	True	ATTAAA	-14
PB.5782.12	chr19	+	2940	18	novel_in_catalog	ADGRE5	novel	587	5	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	6493	junction_6	293843.25553285267	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	82	2340	15.0	-1	True	ATTAAA	-14
PB.5782.15	chr19	+	2919	20	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	359252.4024629889	NA	1	1	TRUE	NA	NA	NA	C	coding	540	1623	81	1703	15.0	0	True	ATTAAA	-13
PB.5782.14	chr19	+	3110	20	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	336952.2327558991	NA	0	NA	TRUE	NA	NA	NA	C	coding	809	2430	81	2510	15.0	0	True	ATTAAA	-14
PB.5782.17	chr19	+	2773	19	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	346812.99989719887	NA	1	1	TRUE	NA	NA	NA	C	coding	491	1476	81	1556	15.0	0	True	ATTAAA	-14
PB.2700.15	chr12	+	2720	21	incomplete-splice_match	MARS	ENST00000537638.6	3592	23	785	916	-6	-2	internal_fragment	FALSE	canonical	1	46125	junction_13	393703.37781015737	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	13	1653	20.0	8	True	AATAAA	-23
PB.7370.4	chr20	+	2172	9	full-splice_match	RTF2	ENST00000357348.9	2212	9	40	0	17	0	multi-exon	FALSE	canonical	1	1392527	junction_3	170723.50543417968	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	68	988	10.0	-26	True	AATAAA	-13
PB.8187.14	chr3	-	2137	15	novel_not_in_catalog	FAM208A	novel	7119	17	NA	NA	-31	14175	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	93827.01517798156	NA	0	NA	TRUE	NA	NA	NA	B	coding	647	1941	195	2135	60.0	-4	True	AAGAAA	-11
PB.730.6	chr1	-	2448	9	novel_not_in_catalog	CTSS	novel	4107	8	NA	NA	-5	8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	566330.3909064478	NA	8	1	TRUE	NA	NA	NA	C	coding	331	996	102	1097	20.0	-6	True	NA	NA
PB.8187.11	chr3	-	3991	18	incomplete-splice_match	FAM208A	ENST00000493960.6	5600	24	-296	10369	-76	-5458	3prime_fragment	FALSE	canonical	1	153392	junction_17	67975.80312186303	NA	2	NA	TRUE	NA	NA	NA	B	coding	1228	3684	308	3991	50.0	-49	False	NA	NA
PB.8187.10	chr3	-	5626	24	novel_in_catalog	FAM208A	novel	5099	7	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	1	96743	junction_7	84595.35024785734	NA	0	NA	TRUE	NA	NA	NA	B	coding	1471	4416	288	4703	40.0	-29	True	AATAAA	-12
PB.8187.12	chr3	-	3821	18	novel_in_catalog	FAM208A	novel	5099	7	NA	NA	-29	-5458	combination_of_known_junctions	FALSE	canonical	1	96743	junction_1	77695.50578105784	NA	2	NA	TRUE	NA	NA	NA	B	coding	1187	3561	261	3821	50.0	-2	True	NA	NA
PB.3848.14	chr15	+	2281	6	incomplete-splice_match	SLC24A5	ENST00000341459.7	1897	9	55	4317	3	1153	3prime_fragment	FALSE	canonical	1	23148	junction_1	6319.453140897557	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	19	900	40.0	0	True	AATAAA	-19
PB.3848.15	chr15	+	4765	9	novel_not_in_catalog	SLC24A5	novel	1897	9	NA	NA	11	2910	intron_retention	FALSE	canonical	1	1402	junction_3	11698.23224626268	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	11	1534	35.0	8	True	AATAAA	-19
PB.3848.16	chr15	+	4112	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	69	-2284	17	2284	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	5	1507	55.0	14	True	AGTAAA	-32
PB.10995.1	chr8	+	4433	1	incomplete-splice_match	SLC7A2	ENST00000494857.5	7622	13	68992	61	27210	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	283	False	AATAAA	-25
PB.3848.10	chr15	+	1340	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	53	504	1	-227	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1320	21	1340	35.0	-2	True	AGTAAA	-20
PB.3848.11	chr15	+	4883	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	55	-3041	3	3041	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	19	1521	45.0	0	True	AATAAA	-13
PB.3848.12	chr15	+	2251	9	full-splice_match	SLC24A5	ENST00000341459.7	1897	9	81	-435	29	435	multi-exon	FALSE	canonical	1	23148	junction_1	5561.856075088603	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	233	1495	35.0	26	False	AATAAA	-25
PB.3848.13	chr15	+	2179	8	novel_in_catalog	SLC24A5	novel	1897	9	NA	NA	17	435	intron_retention	FALSE	canonical	1	657	junction_2	12447.68602051426	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	5	1423	35.0	14	True	AATAAA	-25
PB.4008.7	chr15	-	2875	14	novel_not_in_catalog	TBC1D2B	novel	547	2	NA	NA	56	-3	any annotated donor/acceptor	FALSE	canonical	1	6493	junction_1	56163.71813055578	NA	6	NA	TRUE	NA	NA	NA	C	coding	848	2547	323	2869	35.0	90	False	AATAAA	-14
PB.4008.6	chr15	-	2731	14	novel_not_in_catalog	TBC1D2B	novel	547	2	NA	NA	-61	-2	any annotated donor/acceptor	FALSE	canonical	1	3317	junction_13	71604.29298921404	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	136	2724	35.0	-4	True	AATAAA	-15
PB.4008.5	chr15	-	5897	13	novel_in_catalog	TBC1D2B	novel	547	2	NA	NA	-96	-2	combination_of_known_junctions	FALSE	canonical	1	3317	junction_12	58188.36644801853	NA	1	NA	TRUE	NA	NA	NA	C	coding	851	2556	171	2726	35.0	9857	False	AATAAA	-15
PB.6467.8	chr2	+	4373	18	incomplete-splice_match	SPTBN1	ENST00000333896.5	9075	31	-34	19191	-34	13913	3prime_fragment	FALSE	canonical	1	433650	junction_1	258068.3250474491	NA	2	NA	TRUE	NA	NA	NA	C	coding	1318	3954	420	4373	45.0	-23	True	NA	NA
PB.4008.2	chr15	-	6009	13	full-splice_match	TBC1D2B	ENST00000300584.7	6067	13	58	0	58	0	multi-exon	FALSE	canonical	1	134978	junction_12	30919.26359207782	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	321	2834	25.0	92	False	AATAAA	-19
PB.6467.4	chr2	+	9003	32	incomplete-splice_match	SPTBN1	ENST00000356805.8	8482	36	9	7365	9	2	3prime_fragment	FALSE	canonical	1	151261	junction_1	454140.98515109404	NA	0	NA	TRUE	NA	NA	NA	C	coding	2168	6507	273	6779	5.0	3	True	ATTAAA	-22
PB.5454.10	chr18	+	2707	14	full-splice_match	FHOD3	ENST00000589114.5	4154	14	-4	1451	-1	-1451	multi-exon	FALSE	canonical	1	23604	junction_12	23227.112525753684	NA	1	NA	TRUE	NA	NA	NA	C	coding	654	1965	124	2088	25.0	0	True	TATAAA	-16
PB.6467.6	chr2	+	7035	34	incomplete-splice_match	SPTBN1	ENST00000356805.8	8482	36	50	3616	18	-3615	3prime_fragment	FALSE	canonical	1	151261	junction_1	449956.0532169052	NA	18	2	TRUE	NA	NA	NA	C	coding	2268	6804	232	7035	60.0	-1374	False	NA	NA
PB.6467.7	chr2	+	8349	36	novel_not_in_catalog	SPTBN1	novel	8482	36	NA	NA	-94	-1	any annotated donor/acceptor	FALSE	canonical	1	20905	junction_1	471594.71094712376	NA	1	NA	TRUE	NA	NA	NA	C	coding	2364	7095	151	7245	20.0	0	True	ATTAAA	-13
PB.6467.1	chr2	+	6269	29	incomplete-splice_match	SPTBN1	ENST00000356805.8	8482	36	1	13734	1	-4349	3prime_fragment	FALSE	canonical	1	151261	junction_1	415159.69987214386	NA	0	NA	TRUE	NA	NA	NA	C	coding	1996	5988	281	6268	60.0	-5	True	NA	NA
PB.7370.5	chr20	+	1586	9	full-splice_match	RTF2	ENST00000357348.9	2212	9	61	565	-6	-2	multi-exon	FALSE	canonical	1	1392527	junction_3	170723.50543417968	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	47	967	5.0	-5	True	AATAAA	-19
PB.6467.3	chr2	+	8134	36	full-splice_match	SPTBN1	ENST00000356805.8	8482	36	8	340	8	-339	multi-exon	FALSE	canonical	1	151261	junction_1	460881.9138225039	NA	4	NA	TRUE	NA	NA	NA	C	coding	2364	7095	274	7368	30.0	2	True	AATAAA	-29
PB.11387.1	chr8	-	3694	10	novel_in_catalog	PARP10	novel	2179	4	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	214025	junction_7	82810.40122375634	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	100	1914	10.0	-2	True	AATAAA	-40
PB.507.4	chr1	-	3472	3	novel_not_in_catalog	C1orf52	novel	3391	4	NA	NA	-12	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	98471.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	184	555	22	576	25.0	-1	True	NA	NA
PB.9357.42	chr5	+	3780	1	incomplete-splice_match	LNPEP	ENST00000231368.9	12752	18	98267	5	37353	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-14
PB.9357.43	chr5	+	3096	1	incomplete-splice_match	LNPEP	ENST00000231368.9	12752	18	98951	5	38037	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-14
PB.7529.30	chr21	+	3230	14	novel_in_catalog	MX1	novel	762	5	NA	NA	0	958	combination_of_known_junctions	FALSE	canonical	1	38906	junction_4	338424.9691787954	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	351	1820	75.0	0	True	NA	NA
PB.7529.31	chr21	+	2674	16	novel_in_catalog	MX1	novel	762	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	32344	junction_1	300460.48666264844	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	233	2221	15.0	0	True	AATAAA	-15
PB.3104.1	chr13	-	2144	1	full-splice_match	MAB21L1	ENST00000379919.5	3028	1	854	30	854	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	359	1080	218	1297	40.0	2293	False	AATAAA	-7
PB.507.5	chr1	-	1131	4	full-splice_match	C1orf52	ENST00000294661.8	3391	4	18	2242	-12	-227	multi-exon	FALSE	canonical	1	163616	junction_2	109867.52122240474	NA	0	NA	TRUE	NA	NA	NA	C	coding	100	303	22	324	40.0	-1	True	AATAAA	-18
PB.942.9	chr1	+	3160	16	full-splice_match	DARS2	ENST00000647645.1	3209	16	-54	103	1	14	multi-exon	FALSE	canonical	1	5924	junction_11	85997.7273038202	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	577	2451	55.0	-19	True	NA	NA
PB.942.8	chr1	+	3252	16	novel_in_catalog	DARS2	novel	3441	17	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	4059	junction_3	84612.20943139485	NA	1	NA	TRUE	NA	NA	NA	C	coding	611	1836	578	2413	10.0	-20	True	ATTAAA	-39
PB.12241.1	chrX	-	1222	1	full-splice_match	RNF113A	ENST00000371442.3	1353	1	72	59	72	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	343	1032	143	1174	15.0	6	True	AATAAA	-17
PB.5454.17	chr18	+	2590	13	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	-1	-1500	no_combination_of_known_junctions	FALSE	canonical	1	7196	junction_2	31030.293600121193	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	599	2020	35.0	3	True	AATATA	-18
PB.5055.2	chr17	-	3653	16	full-splice_match	ARHGAP27	ENST00000532038.5	3694	16	38	3	0	-3	multi-exon	FALSE	canonical	1	55590	junction_15	52759.33191372141	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	99	2102	35.0	-1	True	NA	NA
PB.5055.3	chr17	-	3658	17	novel_not_in_catalog	ARHGAP27	novel	3694	16	NA	NA	-35	0	any annotated donor/acceptor	FALSE	canonical	1	23390	junction_16	68256.73210570514	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	470	1552	25.0	-3	True	NA	NA
PB.942.3	chr1	+	3920	17	full-splice_match	DARS2	ENST00000361951.5	3441	17	23	-502	23	240	multi-exon	FALSE	canonical	1	198591	junction_7	42916.41355220161	NA	9	NA	TRUE	NA	NA	NA	C	coding	645	1938	640	2577	20.0	-2	True	AATAAA	-15
PB.5055.1	chr17	-	3768	17	novel_in_catalog	ARHGAP27	novel	3694	16	NA	NA	-5	1	combination_of_known_junctions	TRUE	canonical	1	55590	junction_16	53649.97595045477	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	144	2213	35.0	1	True	NA	NA
PB.942.5	chr1	+	3350	16	full-splice_match	DARS2	ENST00000647645.1	3209	16	-114	-27	26	2	multi-exon	FALSE	canonical	1	5924	junction_11	85997.7273038202	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	637	2511	10.0	1	True	ATTAAA	-39
PB.942.4	chr1	+	3263	16	full-splice_match	DARS2	ENST00000648807.1	3057	16	-62	-144	23	2	multi-exon	FALSE	canonical	1	17996	junction_12	83625.87141453296	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	640	2424	10.0	-2	True	ATTAAA	-39
PB.5055.4	chr17	-	3565	17	novel_in_catalog	ARHGAP27	novel	3694	16	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	5067	junction_15	67445.24460276902	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	120	2018	25.0	25	False	NA	NA
PB.942.6	chr1	+	2864	17	full-splice_match	DARS2	ENST00000361951.5	3441	17	27	550	27	123	multi-exon	FALSE	canonical	1	198591	junction_7	42916.41355220161	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	636	2573	30.0	2	True	AATATA	-17
PB.6477.3	chr2	-	4202	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	32	177	-15	127	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	3	NA	TRUE	NA	NA	NA	C	coding	783	2352	56	2407	60.0	-44	False	NA	NA
PB.6477.2	chr2	-	3811	29	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	1	202	intron_retention	FALSE	canonical	1	6505	junction_1	72817.20443296625	NA	2	1	TRUE	NA	NA	NA	C	coding	781	2346	19	2364	35.0	-7	True	NA	NA
PB.6477.1	chr2	-	4501	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	74	-164	6	164	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	5	NA	TRUE	NA	NA	NA	C	coding	783	2352	14	2365	55.0	-2	True	NA	NA
PB.6477.7	chr2	-	3648	27	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	1	199	any annotated donor/acceptor	FALSE	canonical	1	2658	junction_4	85954.04381542995	NA	3	1	TRUE	NA	NA	NA	C	coding	702	2109	198	2306	60.0	-7	True	NA	NA
PB.2153.1	chr11	+	1891	7	full-splice_match	PLEKHB1	ENST00000227214.10	2016	7	123	2	17	-2	multi-exon	FALSE	canonical	1	439320	junction_1	39080.56823480892	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	107	676	10.0	17	True	AATAAA	-22
PB.2153.2	chr11	+	2490	6	full-splice_match	PLEKHB1	ENST00000538227.5	577	6	30	-1943	-4	1	multi-exon	FALSE	canonical	1	439320	junction_1	41620.025629016614	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	94	720	10.0	-5173	False	AATAAA	-21
PB.2153.3	chr11	+	1873	6	full-splice_match	PLEKHB1	ENST00000535129.5	1049	6	273	-1097	-49	-2	multi-exon	FALSE	canonical	1	489693	junction_1	29709.03523441985	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	89	658	10.0	3	True	AATAAA	-22
PB.6477.9	chr2	-	3528	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	57	826	10	3	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	31	2382	30.0	-19	True	AGTAAA	-23
PB.6477.8	chr2	-	2979	29	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	1	199	any annotated donor/acceptor	FALSE	canonical	1	6505	junction_1	72817.20443296625	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	19	2364	60.0	-7	True	NA	NA
PB.465.8	chr1	-	6203	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	13	-4113	0	-462	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	8	NA	TRUE	NA	NA	NA	C	coding	393	1182	87	1268	20.0	31	False	TATAAA	-14
PB.7045.7	chr2	-	7178	56	full-splice_match	DOCK10	ENST00000258390.11	7260	56	-24	106	-21	-92	multi-exon	FALSE	canonical	1	43221	junction_55	45806.31111737572	NA	0	NA	TRUE	NA	NA	NA	C	coding	2186	6561	93	6653	10.0	1	True	GATAAA	-18
PB.1493.1	chr10	+	2192	6	full-splice_match	PPIF	ENST00000225174.7	2190	6	-10	8	-1	-8	multi-exon	FALSE	canonical	1	674902	junction_1	287484.19589994854	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	82	705	40.0	-1	True	NA	NA
PB.1493.2	chr10	+	1639	6	full-splice_match	PPIF	ENST00000448165.1	821	6	-189	-629	0	-622	multi-exon	FALSE	canonical	1	43305	junction_5	476086.63923928805	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	81	686	20.0	0	True	AATAAA	-16
PB.1493.3	chr10	+	3929	5	novel_in_catalog	PPIF	novel	518	4	NA	NA	2	-1	intron_retention	FALSE	canonical	1	674902	junction_1	318569.3808062068	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	79	402	25.0	2	True	NA	NA
PB.1493.4	chr10	+	1552	6	full-splice_match	PPIF	ENST00000225174.7	2190	6	16	622	-6	-622	multi-exon	FALSE	canonical	1	674902	junction_1	287484.19589994854	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	56	679	20.0	-3	True	AATAAA	-16
PB.1493.5	chr10	+	2856	5	incomplete-splice_match	PPIF	ENST00000225174.7	2190	6	26	622	4	-622	intron_retention	FALSE	canonical	1	674902	junction_1	280454.59852755134	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	46	537	20.0	7	True	AATAAA	-16
PB.7045.1	chr2	-	7288	56	novel_in_catalog	DOCK10	novel	7288	56	NA	NA	-37	15	combination_of_known_junctions	TRUE	canonical	1	32401	junction_22	48868.21175096199	NA	0	NA	TRUE	NA	NA	NA	C	coding	2177	6534	109	6642	30.0	-15	True	AATAAA	-34
PB.9426.1	chr5	-	3560	2	intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1596	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.7045.9	chr2	-	2735	23	novel_not_in_catalog	DOCK10	novel	7288	56	NA	NA	-33	-4134	any annotated donor/acceptor	FALSE	canonical	1	85	junction_22	48853.31554453818	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	800	2734	65.0	0	True	NA	NA
PB.7045.8	chr2	-	4226	38	incomplete-splice_match	DOCK10	ENST00000258390.11	7260	56	-3	39715	0	2440	3prime_fragment	FALSE	canonical	1	43221	junction_37	38250.82404801342	NA	0	NA	TRUE	NA	NA	NA	C	coding	1385	4155	72	4226	50.0	22	True	NA	NA
PB.8292.12	chr3	-	3020	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	51	265	0	-265	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	135	671	45.0	-9	True	ATTAAA	-16
PB.8292.10	chr3	-	3320	6	full-splice_match	GCSAM	ENST00000470085.5	1072	6	22	-2270	-11	-114	multi-exon	FALSE	canonical	1	29832	junction_4	85877.4653389351	NA	7	NA	TRUE	NA	NA	NA	C	coding	112	339	482	820	60.0	9	True	NA	NA
PB.5947.1	chr19	-	2632	5	full-splice_match	ZFP82	ENST00000392161.3	2623	5	-7	-2	-7	2	multi-exon	FALSE	canonical	1	42261	junction_4	4941.711564579625	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	251	1849	30.0	-20	True	NA	NA
PB.8292.16	chr3	-	1884	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	60	1392	6	863	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	126	662	50.0	0	True	NA	NA
PB.8292.17	chr3	-	2096	7	full-splice_match	GCSAM	ENST00000488580.5	816	7	47	-1327	-12	862	multi-exon	FALSE	canonical	1	3743	junction_5	107494.39434945227	NA	1	1	TRUE	NA	NA	NA	C	coding	161	486	390	875	50.0	-1	True	NA	NA
PB.8292.14	chr3	-	2010	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	50	1276	-1	979	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	136	672	50.0	-10	True	AATAAA	-17
PB.8292.18	chr3	-	1568	6	full-splice_match	GCSAM	ENST00000308910.8	3336	6	80	1688	0	567	multi-exon	FALSE	canonical	1	181684	junction_4	33705.0859390686	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	106	642	30.0	20	True	AATAAA	-25
PB.5454.15	chr18	+	6309	3	incomplete-splice_match	FHOD3	ENST00000589114.5	4154	14	-3	332875	0	-332875	3prime_fragment	FALSE	canonical	1	46184	junction_1	8162.0	NA	10	NA	TRUE	NA	NA	NA	C	coding	114	345	123	467	95.0	1	True	NA	NA
PB.8952.1	chr4	+	3435	1	novel_in_catalog	CEP170P1	novel	4587	17	NA	NA	25617	-57459	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	15	NA	NA	NA	NA	NA	A	coding	157	474	178	651	75.0	NA	False	NA	NA
PB.1483.7	chr10	+	1503	7	novel_not_in_catalog	SAMD8	novel	919	4	NA	NA	-13	-89	any annotated donor/acceptor	FALSE	canonical	1	548	junction_2	96642.3050790905	NA	4	NA	TRUE	NA	NA	NA	C	coding	415	1248	206	1453	20.0	1	True	ATTAAA	-20
PB.1483.6	chr10	+	2456	6	full-splice_match	SAMD8	ENST00000372690.7	1654	6	147	-949	-17	949	multi-exon	FALSE	canonical	1	52322	junction_1	62853.62769291841	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	121	1368	20.0	-3	True	AATATA	-20
PB.12255.1	chrX	+	2091	2	novel_not_in_catalog	STAG2	novel	989	4	NA	NA	240580	-85802	any annotated donor/acceptor	FALSE	canonical	1	2935	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	67	570	10.0	NA	False	AATAAA	-14
PB.1483.4	chr10	+	2566	6	novel_in_catalog	SAMD8	novel	919	4	NA	NA	40	896	combination_of_known_junctions	FALSE	canonical	1	29812	junction_1	71503.43349350434	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	284	1531	25.0	0	True	AGTAAA	-24
PB.1483.3	chr10	+	6771	6	full-splice_match	SAMD8	ENST00000542569.5	6782	6	13	-2	13	2	multi-exon	FALSE	canonical	1	52322	junction_1	62853.62769291841	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	91	1338	30.0	-8	True	AATAAA	-19
PB.1483.2	chr10	+	5436	6	novel_in_catalog	SAMD8	novel	919	4	NA	NA	11	645	combination_of_known_junctions	FALSE	canonical	1	29812	junction_1	71503.43349350434	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	313	1560	85.0	-29	True	NA	NA
PB.1483.1	chr10	+	5213	6	full-splice_match	SAMD8	ENST00000542569.5	6782	6	14	1555	14	645	multi-exon	FALSE	canonical	1	52322	junction_1	62853.62769291841	NA	2	NA	TRUE	NA	NA	NA	C	coding	415	1248	90	1337	85.0	-7	True	NA	NA
PB.465.2	chr1	-	6214	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	14	448	-2	-448	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	3	NA	TRUE	NA	NA	NA	C	coding	387	1164	102	1265	25.0	0	True	TATAAA	-28
PB.1483.8	chr10	+	2675	1	novel_in_catalog	SAMD8	novel	919	4	NA	NA	23	-54295	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	2	True	NA	NA
PB.11078.3	chr8	+	4846	35	full-splice_match	WRN	ENST00000298139.5	5215	35	3	366	3	-360	multi-exon	FALSE	canonical	1	80082	junction_5	25497.346629576754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1432	4299	247	4545	30.0	-33	True	ATTAAA	-14
PB.185.2	chr1	+	2901	9	novel_in_catalog	LDLRAP1	novel	2940	9	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	1	5055	junction_1	96036.46790900579	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	164	1009	30.0	3	True	AATAAA	-20
PB.185.3	chr1	+	2189	3	incomplete-splice_match	LDLRAP1	ENST00000484476.5	657	4	859	-1884	41	0	5prime_fragment	FALSE	canonical	1	175451	junction_2	14220.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	67	297	30.0	9	True	AATAAA	-20
PB.8718.9	chr4	-	2845	14	novel_in_catalog	DHX15	novel	470	3	NA	NA	17	-1	no_combination_of_known_junctions	FALSE	canonical	1	5225	junction_13	413661.9887104037	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	213	2399	25.0	337	False	AATAAA	-13
PB.185.1	chr1	+	2910	9	full-splice_match	LDLRAP1	ENST00000374338.4	2940	9	28	2	28	0	multi-exon	FALSE	canonical	1	114582	junction_1	68280.2893830597	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	92	1018	30.0	1	True	AATAAA	-20
PB.8718.6	chr4	-	2912	14	novel_not_in_catalog	DHX15	novel	470	3	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	3532	junction_4	411240.40080431337	NA	2	1	TRUE	NA	NA	NA	C	coding	771	2316	150	2465	25.0	-13	True	AATAAA	-14
PB.8718.5	chr4	-	3150	14	novel_not_in_catalog	DHX15	novel	470	3	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	7062	junction_4	410422.715251486	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	137	1939	25.0	0	True	AATAAA	-14
PB.8718.4	chr4	-	5927	13	novel_in_catalog	DHX15	novel	470	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1040316	junction_5	211367.56807164347	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	159	2111	25.0	-22	True	AATAAA	-14
PB.8718.3	chr4	-	2823	13	novel_in_catalog	DHX15	novel	470	3	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	762	junction_8	397444.60498934804	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	156	2375	20.0	-19	True	AATAAA	-15
PB.8718.2	chr4	-	2973	14	full-splice_match	DHX15	ENST00000336812.4	2994	14	24	-3	11	3	multi-exon	FALSE	canonical	1	1039454	junction_4	218841.73155480498	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	134	2521	20.0	3	True	AATAAA	-19
PB.7059.1	chr2	+	1895	5	full-splice_match	ITM2C	ENST00000335005.10	1889	5	0	-6	0	5	multi-exon	FALSE	canonical	1	80351	junction_1	1130214.558608536	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	79	741	15.0	0	True	AATAAA	-22
PB.3218.19	chr13	-	4622	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-498	combination_of_known_junctions	FALSE	canonical	1	1970	junction_2	106659.93532535718	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	428	1669	15.0	-1	True	AATAAA	-16
PB.3218.18	chr13	-	4679	10	full-splice_match	DCT	ENST00000446125.1	2395	10	0	-2284	0	-497	multi-exon	FALSE	canonical	1	1970	junction_2	117082.22829667012	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	428	2086	15.0	-1	True	AATAAA	-17
PB.5439.10	chr18	+	2489	7	incomplete-splice_match	RNF138	ENST00000261593.7	3570	8	837	708	2	138	5prime_fragment	FALSE	canonical	1	55586	junction_2	34292.09477902062	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	86	823	15.0	4	True	AATGAA	-42
PB.8473.26	chr3	+	4936	10	full-splice_match	MBNL1	ENST00000324210.9	5465	10	-34	563	9	-3	multi-exon	FALSE	canonical	1	530746	junction_1	234718.33746102825	NA	4	NA	TRUE	NA	NA	NA	C	coding	382	1149	954	2102	75.0	-3	True	TTTAAA	-6
PB.8320.10	chr3	-	2732	7	full-splice_match	CD80	ENST00000264246.7	2725	7	-12	5	-12	-5	multi-exon	FALSE	canonical	1	50720	junction_1	16636.31122641742	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	376	1242	30.0	-1	True	AAGAAA	-21
PB.3218.12	chr13	-	4281	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-496	no_combination_of_known_junctions	FALSE	canonical	1	733	junction_6	96304.91263069374	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	428	1687	10.0	-1	True	AATAAA	-18
PB.3218.11	chr13	-	4278	7	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	0	-496	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	97550.10493701286	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	428	1684	10.0	-1	True	AATAAA	-18
PB.8320.13	chr3	-	1539	7	novel_not_in_catalog	CD80	novel	2725	7	NA	NA	-749	8	any annotated donor/acceptor	FALSE	canonical	1	11	junction_6	32227.369933110516	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	358	1224	25.0	2301	False	ATTAAA	-21
PB.3218.17	chr13	-	4616	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-534	no_combination_of_known_junctions	FALSE	canonical	1	8119	junction_2	105381.98686652999	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	428	1699	75.0	-1	True	NA	NA
PB.3218.16	chr13	-	4753	11	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-497	no_combination_of_known_junctions	FALSE	canonical	1	899	junction_3	120065.20882920249	NA	2	1	TRUE	NA	NA	NA	C	coding	441	1326	428	1753	15.0	-1	True	AATAAA	-17
PB.10235.40	chr6	+	4198	8	incomplete-splice_match	TNFAIP3	ENST00000619035.4	2267	9	188	-2117	188	3	intron_retention	FALSE	canonical	1	500113	junction_3	113460.59590007449	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	142	2202	20.0	-9703	False	AATAAA	-17
PB.10235.41	chr6	+	4456	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-176	1	intron_retention	FALSE	canonical	1	33700	junction_1	232102.1157674664	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	90	2462	25.0	0	True	AATAAA	-15
PB.10235.42	chr6	+	4012	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-378	115	intron_retention	FALSE	canonical	1	4050	junction_1	240864.45500396975	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	96	2468	75.0	0	True	NA	NA
PB.10235.43	chr6	+	3740	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-176	-151	intron_retention	FALSE	canonical	1	33700	junction_1	232102.1157674664	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	90	2462	10.0	0	True	AATAAA	-29
PB.10235.44	chr6	+	4040	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-210	115	intron_retention	FALSE	canonical	1	33700	junction_1	232102.1157674664	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	124	2496	75.0	-1	True	NA	NA
PB.2368.1	chr11	+	2966	9	full-splice_match	FLI1	ENST00000527786.6	4127	9	314	847	-4	3	multi-exon	FALSE	canonical	1	227851	junction_8	57977.421869287835	NA	0	NA	TRUE	NA	NA	NA	A	coding	452	1359	176	1534	20.0	12	True	AATAAA	-20
PB.10235.46	chr6	+	1938	1	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-177	1449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	110	333	195	527	80.0	-1	True	AAGAAA	-23
PB.10235.47	chr6	+	4228	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	-176	-226	intron_retention	FALSE	canonical	1	33700	junction_1	232102.1157674664	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	90	2462	35.0	0	True	AATAAA	-17
PB.10235.48	chr6	+	4110	8	incomplete-splice_match	TNFAIP3	ENST00000619035.4	2267	9	-176	-1665	-176	115	intron_retention	FALSE	canonical	1	500113	junction_3	113460.59590007449	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	194	2566	75.0	0	True	NA	NA
PB.10235.49	chr6	+	3837	8	incomplete-splice_match	TNFAIP3	ENST00000619035.4	2267	9	-176	-1392	-176	-158	intron_retention	FALSE	canonical	1	500113	junction_3	113460.59590007449	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	194	2566	20.0	0	True	AATAAA	-22
PB.858.28	chr1	-	3988	3	incomplete-splice_match	SLAMF1	ENST00000538290.2	1087	8	-67	20640	-4	5606	3prime_fragment	FALSE	canonical	1	227876	junction_2	5605.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	81	986	60.0	-4	True	NA	NA
PB.11222.1	chr8	-	6383	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-51	5226	-51	-5226	multi-exon	TRUE	canonical	1	27204	junction_1	6272.584050187504	NA	4	NA	TRUE	NA	NA	NA	C	coding	607	1824	334	2157	40.0	7	True	ATTAAA	-18
PB.11222.2	chr8	-	6239	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-89	5408	-89	-5408	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	372	2195	45.0	257	False	AATAAA	-21
PB.11222.3	chr8	-	5894	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-55	5719	-55	-5719	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	9	NA	TRUE	NA	NA	NA	C	coding	607	1824	338	2161	35.0	3	True	ATTAAA	-18
PB.11222.4	chr8	-	5240	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-164	6482	-164	-6482	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	3	NA	TRUE	NA	NA	NA	C	coding	607	1824	447	2270	15.0	5	True	AAGAAA	-10
PB.8473.27	chr3	+	3012	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-1	-974	combination_of_known_junctions	FALSE	canonical	1	118983	junction_1	328081.2097758486	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	277	1149	70.0	-1121	False	AATGAA	-7
PB.11222.6	chr8	-	4429	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-118	7247	-118	-7247	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	401	2224	70.0	228	False	NA	NA
PB.11222.7	chr8	-	4177	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-170	7551	-170	-7551	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	453	2276	35.0	-1	True	NA	NA
PB.6850.29	chr2	-	3276	8	novel_in_catalog	WIPF1	novel	4587	8	NA	NA	-21	-113	intron_retention	FALSE	canonical	1	2226	junction_7	233604.6949797273	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	101	1612	65.0	-2	True	AAGAAA	-8
PB.5898.2	chr19	+	1906	11	novel_in_catalog	CCNE1	novel	2043	12	NA	NA	-13	3	no_combination_of_known_junctions	FALSE	canonical	1	10569	junction_1	69610.85620476161	NA	2	1	TRUE	NA	NA	NA	C	coding	395	1188	185	1372	20.0	-3	True	AATAAA	-21
PB.5898.1	chr19	+	1955	12	full-splice_match	CCNE1	ENST00000262643.7	2043	12	91	-3	-15	3	multi-exon	FALSE	canonical	1	38283	junction_1	68908.99740447002	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	189	1421	20.0	-5	True	AATAAA	-21
PB.6850.28	chr2	-	3323	8	full-splice_match	WIPF1	ENST00000359761.7	2003	8	1	-1321	1	-113	multi-exon	FALSE	canonical	1	75247	junction_7	214815.19339380148	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	148	1659	65.0	-4	True	AAGAAA	-8
PB.12223.3	chrX	+	4120	27	novel_in_catalog	ALG13	novel	745	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	34989	junction_1	73210.26802632734	NA	0	NA	TRUE	NA	NA	NA	C	coding	1033	3102	374	3475	30.0	0	True	AATAAA	-20
PB.12223.4	chrX	+	3990	27	novel_in_catalog	ALG13	novel	745	7	NA	NA	-4	0	intron_retention	FALSE	canonical	1	27342	junction_1	73616.94363183185	NA	0	NA	TRUE	NA	NA	NA	C	coding	1033	3102	243	3344	30.0	6	True	AATAAA	-21
PB.8900.2	chr4	-	4741	13	full-splice_match	PPP3CA	ENST00000394853.8	3604	13	-247	-890	-14	-7	multi-exon	FALSE	canonical	1	441508	junction_12	113426.6841204289	NA	2	NA	TRUE	NA	NA	NA	C	coding	511	1536	779	2314	45.0	5	True	AATAAA	-12
PB.12223.5	chrX	+	3132	20	incomplete-splice_match	ALG13	ENST00000610588.4	4175	27	32050	1	-4659	0	5prime_fragment	FALSE	canonical	1	73383	junction_1	31639.829451284517	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	325	2487	30.0	689	False	AATAAA	-20
PB.199.1	chr1	-	4012	1	full-splice_match	AL512408.1	ENST00000569378.1	2000	1	-1817	-195	-1817	195	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	222	669	2	670	75.0	2236	False	ATTAAA	-33
PB.7381.18	chr20	+	3705	7	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-5	-1019	intron_retention	FALSE	canonical	0	0	junction_1	308797.7011965115	NA	4	1	TRUE	NA	NA	NA	C	coding	139	420	1096	1515	65.0	-35	True	NA	NA
PB.7381.19	chr20	+	3065	8	full-splice_match	STX16	ENST00000371132.8	4552	8	-355	1842	-3	1198	multi-exon	FALSE	canonical	1	273641	junction_1	207679.19878298562	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	758	1672	25.0	-33	True	AAAAAG	-20
PB.6850.24	chr2	-	2642	6	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	-7	5	intron_retention	FALSE	non_canonical	0	0	junction_4	254728.07272650575	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	664	1020	35.0	419	False	AATAAA	-34
PB.7381.12	chr20	+	3844	1	genic	STX16-NPEPL1_STX16	novel	NA	NA	NA	NA	-9	-14331	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	B	coding	129	390	3	392	60.0	-39	True	ATTAAA	-20
PB.7381.13	chr20	+	3454	9	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-8	-861	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	302552.73682117695	NA	5	1	TRUE	NA	NA	NA	C	coding	272	819	288	1106	90.0	-38	True	NA	NA
PB.7381.10	chr20	+	4760	8	full-splice_match	STX16	ENST00000371132.8	4552	8	-322	114	0	-88	multi-exon	FALSE	canonical	1	273641	junction_1	207679.19878298562	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	725	1639	25.0	0	True	AATAAA	-25
PB.7381.11	chr20	+	3882	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	-9	-861	intron_retention	FALSE	canonical	1	42049	junction_5	263488.495397016	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	764	1534	90.0	-39	True	NA	NA
PB.7381.16	chr20	+	3915	8	full-splice_match	STX16	ENST00000358029.8	4329	8	-631	1045	-5	-1019	multi-exon	FALSE	canonical	1	59797	junction_1	255480.67011052414	NA	1	1	TRUE	NA	NA	NA	C	coding	321	966	760	1725	65.0	-35	True	NA	NA
PB.7381.17	chr20	+	3910	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	-5	-861	intron_retention	FALSE	canonical	1	59797	junction_1	293377.77896009025	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	760	1146	90.0	-35	True	NA	NA
PB.7381.14	chr20	+	3382	8	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	-8	-861	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	271044.10133084416	NA	3	1	TRUE	NA	NA	NA	C	coding	272	819	216	1034	90.0	-38	True	NA	NA
PB.4155.1	chr16	-	992	3	full-splice_match	MRPS34	ENST00000397375.6	1024	3	8	24	3	-18	multi-exon	FALSE	canonical	1	1244134	junction_2	183930.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	218	657	29	685	65.0	-18	True	NA	NA
PB.6773.4	chr2	+	3880	14	full-splice_match	EPC2	ENST00000258484.10	3649	14	-230	-1	-230	1	multi-exon	FALSE	canonical	1	124846	junction_3	47390.430216016946	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	265	2688	20.0	3	True	AATAAA	-20
PB.6773.5	chr2	+	3703	15	novel_not_in_catalog	EPC2	novel	724	5	NA	NA	-229	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71038.3294392211	NA	12	1	TRUE	NA	NA	NA	C	coding	807	2424	114	2537	70.0	4	True	NA	NA
PB.6773.1	chr2	+	3411	14	full-splice_match	EPC2	ENST00000258484.10	3649	14	-251	489	-251	-489	multi-exon	FALSE	canonical	1	124846	junction_3	47390.430216016946	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	286	2709	70.0	-18	True	TATAAA	-15
PB.6773.2	chr2	+	4823	14	full-splice_match	EPC2	ENST00000258484.10	3649	14	-248	-926	-248	926	multi-exon	FALSE	canonical	1	124846	junction_3	47390.430216016946	NA	1	NA	TRUE	NA	NA	NA	C	coding	807	2424	283	2706	15.0	-15	True	AGTAAA	-22
PB.6773.3	chr2	+	4665	15	novel_not_in_catalog	EPC2	novel	724	5	NA	NA	-244	926	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71038.3294392211	NA	4	1	TRUE	NA	NA	NA	C	coding	807	2424	125	2548	15.0	-11	True	AGTAAA	-22
PB.211.14	chr1	-	2237	3	novel_not_in_catalog	WASF2	novel	5676	9	NA	NA	-9	-1406	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	137263.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-10	True	NA	NA
PB.8473.21	chr3	+	4716	11	full-splice_match	MBNL1	ENST00000282488.11	6458	11	853	889	-13	-313	multi-exon	FALSE	canonical	1	174701	junction_5	331943.2298471532	NA	3	NA	TRUE	NA	NA	NA	C	coding	400	1203	990	2192	30.0	2	True	AATAAA	-16
PB.211.16	chr1	-	3270	9	full-splice_match	WASF2	ENST00000618852.4	5676	9	-12	2418	-12	1553	multi-exon	FALSE	canonical	1	17828	junction_7	135850.40184881448	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	229	1725	20.0	-13	True	AATACA	-41
PB.211.17	chr1	-	3044	9	full-splice_match	WASF2	ENST00000618852.4	5676	9	-9	2641	-9	1330	multi-exon	FALSE	canonical	1	17828	junction_7	135850.40184881448	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	226	1722	25.0	-10	True	TTTAAA	-22
PB.11556.1	chr9	+	5205	1	full-splice_match	BX664615.1	ENST00000443558.1	458	1	-192	-4555	-192	4555	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	NA	False	ATTAAA	-15
PB.6850.22	chr2	-	3363	8	full-splice_match	WIPF1	ENST00000392547.6	4587	8	-32	1256	-6	-58	multi-exon	FALSE	canonical	1	113671	junction_7	205514.79251153974	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	133	1644	60.0	-7	False	AATAAA	-15
PB.5913.1	chr19	+	6680	14	full-splice_match	KIAA0355	ENST00000299505.6	6717	14	12	25	-3	-25	multi-exon	TRUE	canonical	1	68097	junction_1	36977.8825962463	NA	1	NA	TRUE	NA	NA	NA	C	coding	1070	3213	862	4074	20.0	-17	True	ATTAAA	-14
PB.38.8	chr1	+	3371	8	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-10	0	intron_retention	FALSE	canonical	1	4236	junction_1	232972.10655749484	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	144	701	10.0	-1	True	NA	NA
PB.5913.3	chr19	+	5381	14	full-splice_match	KIAA0355	ENST00000299505.6	6717	14	18	1318	3	1080	multi-exon	FALSE	canonical	1	68097	junction_1	36977.8825962463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1070	3213	856	4068	30.0	-11	True	ATTAAA	-25
PB.5182.4	chr17	-	3637	1	incomplete-splice_match	ERN1	ENST00000433197.3	7876	22	87339	8	11981	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-12
PB.5913.5	chr19	+	2331	7	novel_not_in_catalog	KIAA0355	novel	6717	14	NA	NA	-14	9819	intron_retention	TRUE	non_canonical	0	0	junction_6	52183.605796158714	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	844	2196	90.0	1	True	NA	NA
PB.5182.2	chr17	-	7959	22	full-splice_match	ERN1	ENST00000433197.3	7876	22	-87	4	-68	-4	multi-exon	FALSE	canonical	1	28764	junction_21	21155.85591093546	NA	4	NA	TRUE	NA	NA	NA	C	coding	977	2934	184	3117	15.0	606	False	AATAAA	-16
PB.401.25	chr1	-	3975	22	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-12	-975	any annotated donor/acceptor	FALSE	canonical	1	3302	junction_15	189038.18234180353	NA	1	NA	TRUE	NA	NA	NA	C	coding	825	2478	36	2513	20.0	-1	True	AATAAA	-19
PB.6094.8	chr19	+	2488	5	full-splice_match	CALM3	ENST00000597868.5	927	5	-85	-1476	6	0	multi-exon	FALSE	canonical	1	3589202	junction_2	1441883.276076205	NA	0	NA	TRUE	NA	NA	NA	C	coding	104	315	154	468	5.0	6	True	AATAAA	-17
PB.1266.7	chr10	+	3528	17	full-splice_match	GTPBP4	ENST00000360803.8	5075	17	416	1131	-27	-1131	multi-exon	FALSE	canonical	1	567439	junction_1	133619.8808418253	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	46	1950	85.0	-27	True	NA	NA
PB.6094.6	chr19	+	768	6	full-splice_match	CALM3	ENST00000291295.13	2289	6	31	1490	-9	-2	multi-exon	FALSE	canonical	1	3589202	junction_2	1426497.725039532	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	169	618	20.0	-9	True	GATAAA	-20
PB.6094.7	chr19	+	1826	5	novel_not_in_catalog	CALM3	novel	702	6	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	2224626.180362262	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	165	464	5.0	-5	True	AATAAA	-16
PB.6094.4	chr19	+	2052	6	novel_not_in_catalog	CALM3	novel	702	6	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_5	2380636.485669914	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	173	694	5.0	-13	True	AATAAA	-17
PB.6094.5	chr19	+	2470	7	novel_not_in_catalog	CALM3	novel	702	6	NA	NA	-10	0	intron_retention	FALSE	canonical	1	4831	junction_2	2970944.185167047	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	501	842	5.0	-10	True	AATAAA	-17
PB.6094.2	chr19	+	1661	2	novel_not_in_catalog	CALM3	novel	702	6	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-18	True	AATAAA	-17
PB.1266.4	chr10	+	2986	17	full-splice_match	GTPBP4	ENST00000360803.8	5075	17	415	1674	-28	1065	multi-exon	FALSE	canonical	1	567439	junction_1	133619.8808418253	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	47	1951	65.0	-28	True	NA	NA
PB.6094.1	chr19	+	2143	6	full-splice_match	CALM3	ENST00000291295.13	2289	6	134	12	3	0	multi-exon	FALSE	canonical	1	3589202	junction_2	1426497.725039532	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	66	515	5.0	4	True	AATAAA	-17
PB.10495.22	chr7	-	2347	26	novel_in_catalog	VPS41	novel	5903	29	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	168	junction_1	86589.64839754	NA	1	1	TRUE	NA	NA	NA	C	coding	768	2307	18	2324	5.0	-1	True	ATTAAA	-18
PB.7982.5	chr3	-	2339	12	full-splice_match	NGLY1	ENST00000280700.9	2473	12	106	28	-7	-28	multi-exon	FALSE	canonical	1	266653	junction_11	54062.00270411896	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	56	2020	30.0	-3	True	ATTAAA	-19
PB.10495.20	chr7	-	2719	29	full-splice_match	VPS41	ENST00000310301.8	5903	29	38	3146	0	0	multi-exon	FALSE	canonical	1	194369	junction_28	68542.99035061194	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	18	2582	20.0	-1	True	AAAACA	-13
PB.10495.21	chr7	-	2657	29	full-splice_match	VPS41	ENST00000310301.8	5903	29	39	3207	1	-61	multi-exon	FALSE	canonical	1	194369	junction_28	68542.99035061194	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	17	2581	25.0	0	True	NA	NA
PB.4336.20	chr16	+	2138	13	novel_not_in_catalog	ATXN2L	novel	4574	21	NA	NA	-910	-27	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	476363.8432447583	NA	35	6	TRUE	NA	NA	NA	C	coding	451	1356	372	1727	75.0	-2295	False	NA	NA
PB.4336.21	chr16	+	2636	11	incomplete-splice_match	ATXN2L	ENST00000570200.5	3635	23	9243	27	-701	-27	intron_retention	FALSE	canonical	1	503482	junction_1	348404.91938897764	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	259	1713	75.0	-2086	False	NA	NA
PB.6375.6	chr2	-	3441	19	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	14559	junction_1	150614.9146263861	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	56	2650	25.0	-6	True	NA	NA
PB.920.1	chr1	+	2496	7	full-splice_match	BLZF1	ENST00000367808.7	2749	7	252	1	-15	-1	multi-exon	FALSE	canonical	1	172669	junction_5	31137.31933798341	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	172	1374	15.0	27	True	AATAAA	-17
PB.6375.4	chr2	-	3917	20	novel_not_in_catalog	GTF3C2	novel	3992	19	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	10888	junction_19	152485.41012108343	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	363	3098	30.0	0	True	NA	NA
PB.6375.5	chr2	-	3738	19	novel_not_in_catalog	GTF3C2	novel	3992	19	NA	NA	3	2	any annotated donor/acceptor	FALSE	canonical	1	749	junction_18	132638.35241343515	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	180	2915	25.0	511	False	NA	NA
PB.6375.2	chr2	-	3408	19	novel_not_in_catalog	GTF3C2	novel	3992	19	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	11582	junction_1	151041.03139819406	NA	3	NA	TRUE	NA	NA	NA	C	coding	878	2637	66	2702	20.0	221	False	NA	NA
PB.7982.7	chr3	-	2143	12	full-splice_match	NGLY1	ENST00000308710.9	2086	12	-46	-11	11	5	multi-exon	FALSE	canonical	1	17096	junction_5	138163.27449946033	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	38	1948	35.0	15	False	AATAAA	-25
PB.6375.1	chr2	-	4197	19	full-splice_match	GTF3C2	ENST00000264720.7	3882	19	270	-585	3	585	multi-exon	FALSE	canonical	1	74792	junction_18	119927.58344277115	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	51	2786	60.0	-1	True	NA	NA
PB.1099.6	chr1	+	3827	9	full-splice_match	SYT14	ENST00000537238.5	5208	9	59	1322	-18	-3	multi-exon	FALSE	canonical	1	4536	junction_3	6758.112879162348	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	352	1905	50.0	0	True	AATAAA	-20
PB.7982.6	chr3	-	1882	10	novel_in_catalog	NGLY1	novel	2288	3	NA	NA	-5	17	combination_of_known_junctions	FALSE	canonical	1	66949	junction_1	119675.05329293432	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	54	1565	30.0	-1	True	AATAAA	-37
PB.920.3	chr1	+	2134	5	incomplete-splice_match	BLZF1	ENST00000367808.7	2749	7	226	6556	-41	1187	3prime_fragment	FALSE	canonical	1	175472	junction_1	31699.73907226998	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	198	1055	65.0	1	True	NA	NA
PB.8585.1	chr3	-	2691	8	full-splice_match	TBCCD1	ENST00000338733.9	2441	8	25	-275	25	9	multi-exon	FALSE	canonical	1	60122	junction_6	21883.80789440411	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	105	1778	25.0	0	True	AATAAA	-18
PB.612.4	chr1	-	2710	9	novel_in_catalog	AL390195.1	novel	415	2	NA	NA	-7887	-1626	intron_retention	FALSE	canonical	1	372963	junction_8	212002.72393028202	NA	0	NA	TRUE	NA	NA	NA	B	coding	290	873	83	955	15.0	4	True	AATAAA	-25
PB.7982.1	chr3	-	2533	12	full-splice_match	NGLY1	ENST00000280700.9	2473	12	110	-170	-3	1	multi-exon	FALSE	canonical	1	266653	junction_11	54062.00270411896	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	52	2016	15.0	1	True	AATAAA	-20
PB.920.2	chr1	+	2316	6	novel_in_catalog	BLZF1	novel	1295	3	NA	NA	-56	-2	no_combination_of_known_junctions	FALSE	canonical	1	12953	junction_5	87564.40015668469	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	213	1016	15.0	-14	True	AATAAA	-16
PB.8730.1	chr4	-	3642	7	full-splice_match	RELL1	ENST00000454158.6	1350	7	-26	-2266	-26	2266	multi-exon	FALSE	canonical	1	82635	junction_6	37190.66384823243	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	116	931	5.0	-27	False	AATAAA	-13
PB.10871.9	chr7	-	2468	1	incomplete-splice_match	CREB3L2	ENST00000330387.10	7412	12	124491	120	50703	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	8187	False	AGTAAA	-5
PB.8959.1	chr4	+	3280	1	genic	AC108866.1	novel	NA	NA	NA	NA	-31	-15373	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-31	False	NA	NA
PB.8730.2	chr4	-	3156	8	novel_not_in_catalog	RELL1	novel	1326	7	NA	NA	0	2266	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	59975.19556296858	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	90	905	5.0	-1	True	AATAAA	-13
PB.7982.3	chr3	-	2362	11	novel_in_catalog	NGLY1	novel	2288	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	76211	junction_3	101245.50729395355	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	48	1847	20.0	5	True	AATAAA	-18
PB.10474.12	chr7	+	4478	17	novel_not_in_catalog	AVL9	novel	489	3	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	500	junction_1	111566.49568515112	NA	3	NA	TRUE	NA	NA	NA	C	coding	664	1995	227	2221	30.0	0	True	AATAAA	-19
PB.3532.1	chr14	+	4157	2	novel_not_in_catalog	ADAM21	novel	2658	2	NA	NA	-35032	1542	any annotated donor/acceptor	FALSE	canonical	1	3764	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	722	2169	216	2384	25.0	NA	False	NA	NA
PB.7982.2	chr3	-	2466	12	full-splice_match	NGLY1	ENST00000428257.5	2534	12	68	0	8	0	multi-exon	FALSE	canonical	1	17096	junction_5	138163.27449946033	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	41	1951	20.0	12	False	AATAAA	-18
PB.38.5	chr1	+	3029	7	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-49	-1	intron_retention	FALSE	canonical	1	410721	junction_4	64881.92392017467	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	1955	2554	5.0	-3575	False	NA	NA
PB.8665.6	chr4	+	3376	7	novel_in_catalog	RNF4	novel	558	3	NA	NA	13	0	intron_retention	FALSE	canonical	1	58398	junction_4	234741.27481601952	NA	2	NA	TRUE	NA	NA	NA	B	coding	116	351	1514	1864	40.0	0	True	AATAAA	-17
PB.8665.7	chr4	+	2903	7	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	248080.33094191487	NA	5	1	TRUE	NA	NA	NA	B	coding	116	351	1041	1391	40.0	3	True	AATAAA	-17
PB.8665.4	chr4	+	2997	8	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	279734.01613216184	NA	12	1	TRUE	NA	NA	NA	B	coding	116	351	1135	1485	40.0	-12	True	AATAAA	-17
PB.8665.5	chr4	+	2722	7	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	3	-194	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	248080.33094191487	NA	4	1	TRUE	NA	NA	NA	B	coding	116	351	1054	1404	30.0	-10	True	ATTAAA	-16
PB.8665.2	chr4	+	2759	6	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	214451.4830898588	NA	4	1	TRUE	NA	NA	NA	B	coding	106	321	310	630	40.0	-13	True	AATAAA	-17
PB.8665.3	chr4	+	3041	8	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	266599.25655208126	NA	4	1	TRUE	NA	NA	NA	B	coding	110	333	1	333	40.0	-12	True	AATAAA	-17
PB.719.11	chr1	-	2809	4	novel_in_catalog	ANP32E	novel	3451	7	NA	NA	-3	-6	no_combination_of_known_junctions	FALSE	canonical	1	446	junction_1	448234.91197535646	NA	3	NA	TRUE	NA	NA	NA	C	coding	135	408	282	689	75.0	88	False	AATAAA	-15
PB.8665.1	chr4	+	2893	7	novel_not_in_catalog	RNF4	novel	558	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	269620.9586213373	NA	4	1	TRUE	NA	NA	NA	B	coding	116	351	1031	1381	40.0	-16	True	AATAAA	-17
PB.12247.25	chrX	-	1407	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	-10	2633	-10	-2633	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	148	1380	70.0	-2	True	NA	NA
PB.12247.24	chrX	-	1495	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	10	2525	10	-2525	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	128	1360	65.0	-1	True	NA	NA
PB.12247.26	chrX	-	2457	1	novel_in_catalog	LAMP2	novel	2089	9	NA	NA	-10	-30366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-2	True	NA	NA
PB.12247.21	chrX	-	2641	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	10	1379	10	-1379	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	128	1360	80.0	-1	True	NA	NA
PB.12247.20	chrX	-	2963	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	12	1055	12	-1055	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	126	1358	20.0	1	True	AATACA	-21
PB.12247.23	chrX	-	1974	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	-10	2066	-10	-2066	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	148	1380	30.0	-2	True	AATAAA	-21
PB.12247.22	chrX	-	2480	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	9	1541	9	-1541	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	129	1361	55.0	-2	True	NA	NA
PB.1118.1	chr1	+	4267	16	novel_not_in_catalog	RPS6KC1	novel	4082	14	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	1931	junction_5	63776.90647457485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	168	3437	25.0	-20	True	AATAAA	-15
PB.1118.2	chr1	+	5242	14	novel_in_catalog	RPS6KC1	novel	4082	14	NA	NA	-9	-164	combination_of_known_junctions	FALSE	canonical	1	28998	junction_7	51023.810019087214	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	160	3267	25.0	-12	True	AATAAA	-17
PB.1240.33	chr1	-	4902	13	full-splice_match	HNRNPU	ENST00000476241.2	4844	13	6	-64	2	56	multi-exon	FALSE	canonical	1	1037046	junction_1	1635421.7466973076	NA	2	NA	TRUE	NA	NA	NA	C	coding	549	1650	2937	4586	20.0	-4	True	AGTAAA	-13
PB.1118.7	chr1	+	4141	14	full-splice_match	RPS6KC1	ENST00000366959.4	5454	14	4	1309	4	0	multi-exon	FALSE	canonical	1	6989	junction_1	55975.349222068675	NA	0	NA	TRUE	NA	NA	NA	C	coding	1054	3165	147	3311	25.0	1	True	AATAAA	-15
PB.1846.43	chr11	-	4520	1	novel_in_catalog	HPS5	novel	4725	22	NA	NA	34	-5665	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-8	True	NA	NA
PB.1846.42	chr11	-	2084	15	incomplete-splice_match	HPS5	ENST00000396253.7	4725	22	-21	13272	3	-4049	3prime_fragment	FALSE	canonical	1	34157	junction_14	39823.1215447939	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1599	485	2083	50.0	-1	True	NA	NA
PB.1846.41	chr11	-	2214	16	incomplete-splice_match	HPS5	ENST00000349215.7	4491	23	6	12881	6	-4049	3prime_fragment	FALSE	canonical	1	36087	junction_15	43150.4551569145	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1941	273	2213	50.0	283	False	NA	NA
PB.1846.40	chr11	-	2006	15	incomplete-splice_match	HPS5	ENST00000438420.6	4147	22	-36	12787	-12	-3955	3prime_fragment	FALSE	canonical	1	17314	junction_14	43423.991215298556	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1692	313	2004	55.0	-16	True	AATGAA	-3
PB.8679.4	chr4	-	1816	11	novel_not_in_catalog	STX18	novel	1380	11	NA	NA	8	-143	any annotated donor/acceptor	TRUE	canonical	0	0	junction_4	67482.83193679708	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	39	839	25.0	10	True	AATAAA	-17
PB.1118.5	chr1	+	4074	15	full-splice_match	RPS6KC1	ENST00000366960.7	5490	15	107	1309	107	0	multi-exon	FALSE	canonical	1	90562	junction_8	41150.8581766343	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	44	3244	25.0	11	False	AATAAA	-15
PB.8679.1	chr4	-	2155	11	full-splice_match	STX18	ENST00000306200.6	2138	11	-20	3	-17	-3	multi-exon	FALSE	canonical	1	42505	junction_9	54791.430651517025	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	85	1092	25.0	-1	True	AATAAA	-17
PB.8679.3	chr4	-	3203	10	novel_in_catalog	STX18	novel	1380	11	NA	NA	2	-143	intron_retention	FALSE	canonical	1	42505	junction_8	54069.3807048173	NA	2	NA	TRUE	NA	NA	NA	C	coding	262	789	63	851	25.0	-14	True	AATAAA	-17
PB.8679.2	chr4	-	1624	11	full-splice_match	STX18	ENST00000306200.6	2138	11	7	507	7	-141	multi-exon	FALSE	canonical	1	42505	junction_9	54791.430651517025	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	58	1065	25.0	-9	True	AATAAA	-19
PB.11924.2	chr9	+	2035	3	full-splice_match	TUBB4B	ENST00000604929.1	2035	3	-1	1	-1	-1	multi-exon	FALSE	canonical	1	3705142	junction_2	120091.0	NA	26	1	TRUE	NA	NA	NA	C	coding	299	900	987	1886	0.0	0	True	ATTAAA	-13
PB.1422.10	chr10	+	1879	8	full-splice_match	CDK1	ENST00000395284.7	1913	8	25	9	-14	0	multi-exon	FALSE	canonical	1	731005	junction_1	226562.72365181925	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	118	1011	40.0	1	True	ATTAAA	-7
PB.1422.11	chr10	+	1708	7	full-splice_match	CDK1	ENST00000316629.8	1733	7	25	0	-14	0	multi-exon	TRUE	canonical	1	23550	junction_4	452260.6886150459	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	118	840	40.0	1	True	ATTAAA	-7
PB.1118.3	chr1	+	4301	16	novel_in_catalog	RPS6KC1	novel	4082	14	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	1	7874	junction_2	61856.10256910792	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	814	3471	25.0	-6	True	AATAAA	-15
PB.589.3	chr1	+	1899	11	novel_not_in_catalog	SARS	novel	1852	11	NA	NA	-25	1	any annotated donor/acceptor	FALSE	canonical	1	2280	junction_1	691042.9451904128	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	101	1666	15.0	0	True	AATAAA	-18
PB.490.9	chr1	+	2099	10	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	-4	-415	any annotated donor/acceptor	FALSE	canonical	1	13228	junction_2	180396.94091360766	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	166	1524	95.0	-3	True	NA	NA
PB.490.8	chr1	+	1774	8	novel_in_catalog	IFI44L	novel	554	3	NA	NA	-11	-231	combination_of_known_junctions	FALSE	canonical	1	187581	junction_1	111348.98566476225	NA	0	NA	TRUE	NA	NA	NA	C	coding	189	570	446	1015	80.0	-10	True	NA	NA
PB.612.1	chr1	-	2551	9	novel_in_catalog	AL390195.1	novel	415	2	NA	NA	-7892	-1620	intron_retention	FALSE	canonical	1	64252	junction_1	290131.28632515226	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-31
PB.490.1	chr1	+	2783	2	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	-9	-4680	any annotated donor/acceptor	FALSE	canonical	1	24325	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-3055	False	NA	NA
PB.4027.6	chr15	-	4213	3	full-splice_match	MESD	ENST00000261758.5	4264	3	50	1	0	-1	multi-exon	FALSE	canonical	1	744008	junction_2	80127.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	38	742	40.0	-14	True	AATAAA	-31
PB.490.3	chr1	+	3803	5	novel_in_catalog	IFI44L	novel	554	3	NA	NA	6	1252	combination_of_known_junctions	FALSE	canonical	1	9456	junction_4	174243.009719185	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	174	941	35.0	-3019	False	NA	NA
PB.490.2	chr1	+	2074	9	novel_not_in_catalog	IFI44L	novel	554	3	NA	NA	-3	-415	any annotated donor/acceptor	FALSE	canonical	1	17611	junction_5	171506.7931434769	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	204	1499	95.0	-3049	False	NA	NA
PB.490.5	chr1	+	2013	8	novel_in_catalog	IFI44L	novel	554	3	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	1	187581	junction_1	111348.98566476225	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	457	1026	30.0	-3001	False	AATAAA	-16
PB.490.4	chr1	+	2389	2	incomplete-splice_match	IFI44L	ENST00000452835.1	554	3	505	-1942	-22	-38	5prime_fragment	FALSE	canonical	1	130560	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	156	641	80.0	-3001	False	TATAAA	-23
PB.490.7	chr1	+	2641	8	novel_in_catalog	IFI44L	novel	554	3	NA	NA	-17	-415	intron_retention	FALSE	canonical	1	130560	junction_1	127085.53947460357	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	1164	2066	95.0	-2996	False	NA	NA
PB.490.6	chr1	+	1882	9	full-splice_match	IFI44L	ENST00000370751.9	5874	9	24	3968	-22	209	multi-exon	FALSE	canonical	1	130560	junction_1	126586.90072707957	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	156	1514	30.0	-3001	False	NA	NA
PB.1945.16	chr11	-	2752	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3062	-17801	no_combination_of_known_junctions	FALSE	canonical	1	11645	junction_13	274652.16418025806	NA	2	NA	TRUE	NA	NA	NA	B	coding	491	1476	441	1916	20.0	-1	True	AATAAA	-18
PB.1945.17	chr11	-	2788	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3059	-17801	no_combination_of_known_junctions	FALSE	canonical	1	11645	junction_13	318875.3627237655	NA	1	NA	TRUE	NA	NA	NA	B	coding	504	1515	438	1952	20.0	2	True	AATAAA	-18
PB.1945.14	chr11	-	2561	14	full-splice_match	SLC43A3	ENST00000395124.5	2617	14	30	26	9	-26	multi-exon	FALSE	canonical	1	276605	junction_13	179922.87628041563	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	276	1751	40.0	29	True	AAGAAA	-26
PB.1945.15	chr11	-	2793	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3025	-17801	no_combination_of_known_junctions	FALSE	canonical	1	30774	junction_13	271332.96110825747	NA	2	1	TRUE	NA	NA	NA	B	coding	491	1476	482	1957	20.0	36	True	AATAAA	-18
PB.1945.13	chr11	-	2846	15	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3038	-17801	any annotated donor/acceptor	FALSE	canonical	1	1275	junction_8	345616.4478899424	NA	7	2	TRUE	NA	NA	NA	B	coding	284	855	1156	2010	20.0	23	True	AATAAA	-18
PB.1945.10	chr11	-	2943	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3033	-17801	intron_retention	FALSE	canonical	1	86670	junction_11	243637.60220732214	NA	1	NA	TRUE	NA	NA	NA	B	coding	438	1317	791	2107	20.0	28	True	AATAAA	-18
PB.1945.11	chr11	-	2846	13	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3101	-17801	no_combination_of_known_junctions	FALSE	canonical	1	4683	junction_12	297276.7271725398	NA	0	NA	TRUE	NA	NA	NA	B	coding	292	879	244	1122	20.0	5747	False	AATAAA	-18
PB.10092.26	chr6	-	2088	4	novel_not_in_catalog	AL589666.1	novel	835	8	NA	NA	-28102	-53345	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	190041.2639525076	NA	2	NA	TRUE	NA	NA	NA	B	coding	136	411	119	529	30.0	-20	True	AATAAA	-15
PB.717.9	chr1	+	3055	14	incomplete-splice_match	VPS45	ENST00000644510.2	2328	15	11	33343	11	18358	3prime_fragment	FALSE	canonical	1	221556	junction_3	65188.124801773505	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	72	1700	25.0	0	True	ATTAAA	-15
PB.10092.24	chr6	-	3148	10	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-27741	-53345	no_combination_of_known_junctions	FALSE	canonical	1	11544	junction_6	381487.74357199774	NA	0	NA	TRUE	NA	NA	NA	B	coding	465	1398	192	1589	30.0	-40	True	AATAAA	-15
PB.10092.23	chr6	-	3244	11	full-splice_match	SYNCRIP	ENST00000616122.4	6764	11	-18	3538	-18	2783	multi-exon	FALSE	canonical	1	75283	junction_7	348768.3347548054	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	291	1685	30.0	-5	True	AATAAA	-15
PB.4256.1	chr16	+	933	3	full-splice_match	TNFRSF17	ENST00000053243.5	994	3	62	-1	-44	1	multi-exon	FALSE	canonical	1	251788	junction_1	24489.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	157	711	30.0	-2	True	ATTAAA	-18
PB.1945.18	chr11	-	2624	14	novel_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3032	-17801	no_combination_of_known_junctions	FALSE	canonical	1	86670	junction_12	234429.3815660567	NA	0	NA	TRUE	NA	NA	NA	B	coding	491	1476	313	1788	20.0	29	True	AATAAA	-18
PB.1945.19	chr11	-	2760	14	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3010	-17801	any annotated donor/acceptor	FALSE	canonical	1	1923	junction_5	287779.4119085621	NA	3	NA	TRUE	NA	NA	NA	B	coding	348	1047	430	1476	20.0	5838	False	AATAAA	-18
PB.2735.2	chr12	+	3443	5	full-splice_match	HMGA2	ENST00000403681.6	4473	5	958	72	-34	-72	multi-exon	FALSE	canonical	1	384189	junction_1	35185.94285630982	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	183	512	10.0	-10	True	AATAAA	-22
PB.2735.3	chr12	+	2359	5	full-splice_match	HMGA2	ENST00000403681.6	4473	5	932	1182	-60	-1182	multi-exon	FALSE	canonical	1	384189	junction_1	35185.94285630982	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	209	538	70.0	-36	True	NA	NA
PB.8080.28	chr3	-	2414	22	novel_in_catalog	SMARCC1	novel	6375	28	NA	NA	17	34268	no_combination_of_known_junctions	FALSE	canonical	1	8912	junction_21	202169.94143131204	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2310	104	2413	70.0	-8	True	NA	NA
PB.2735.1	chr12	+	2238	5	full-splice_match	HMGA2	ENST00000403681.6	4473	5	695	1540	15	1345	multi-exon	FALSE	canonical	1	384189	junction_1	35185.94285630982	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	446	775	30.0	-7	True	ATTAAA	-8
PB.2735.4	chr12	+	1903	4	novel_not_in_catalog	HMGA2	novel	4473	5	NA	NA	-55	-16373	any annotated donor/acceptor	FALSE	canonical	1	363	junction_3	205608.60356566362	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-31	True	NA	NA
PB.3031.9	chr12	+	2892	2	novel_in_catalog	ZNF26	novel	733	3	NA	NA	-4	440	no_combination_of_known_junctions	FALSE	canonical	1	1273	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	199	600	1207	1806	0.0	-6	True	AATAAA	-17
PB.3031.6	chr12	+	3126	4	full-splice_match	ZNF26	ENST00000328654.9	17601	4	-61	14536	-15	440	multi-exon	FALSE	canonical	1	19210	junction_1	32686.892082301125	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	439	2040	0.0	-17	True	AATAAA	-17
PB.3031.7	chr12	+	2427	4	full-splice_match	ZNF26	ENST00000328654.9	17601	4	-59	15233	-13	-257	multi-exon	FALSE	canonical	1	19210	junction_1	32686.892082301125	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	437	2038	30.0	-15	True	AATAAA	-25
PB.3031.4	chr12	+	2556	5	novel_in_catalog	ZNF26	novel	733	3	NA	NA	14	-258	no_combination_of_known_junctions	FALSE	canonical	1	18375	junction_2	30647.445908060592	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	627	2168	30.0	-41	True	AATAAA	-24
PB.3031.5	chr12	+	3242	5	novel_in_catalog	ZNF26	novel	733	3	NA	NA	-26	441	no_combination_of_known_junctions	FALSE	canonical	1	18375	junction_2	30647.445908060592	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	614	2155	0.0	-28	True	AATAAA	-18
PB.3031.2	chr12	+	2824	5	novel_in_catalog	ZNF26	novel	733	3	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	18375	junction_2	30647.445908060592	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	639	2180	30.0	0	True	ATTAAA	-26
PB.3031.3	chr12	+	2711	4	full-splice_match	ZNF26	ENST00000328654.9	17601	4	-85	14975	14	1	multi-exon	FALSE	canonical	1	19210	junction_1	32686.892082301125	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	463	2064	30.0	-41	True	ATTAAA	-29
PB.8080.24	chr3	-	4024	28	full-splice_match	SMARCC1	ENST00000254480.9	6375	28	34	2317	-2	1	multi-exon	FALSE	canonical	1	438864	junction_27	147698.30735901746	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	87	3404	20.0	9	True	ATTAAA	-18
PB.3031.1	chr12	+	3471	6	novel_not_in_catalog	ZNF26	novel	733	3	NA	NA	0	440	any annotated donor/acceptor	FALSE	canonical	1	9703	junction_2	35003.63326513406	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	844	2385	0.0	-2	True	AATAAA	-17
PB.11607.13	chr9	-	4014	7	novel_in_catalog	CARNMT1	novel	4130	8	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	6110	junction_4	53494.287918327216	NA	3	NA	TRUE	NA	NA	NA	C	coding	196	591	183	773	25.0	-9	True	ATTAAA	-17
PB.1973.3	chr11	+	1779	4	full-splice_match	TMEM138	ENST00000507563.6	1134	4	-20	-625	6	-3	multi-exon	FALSE	canonical	1	286432	junction_1	56397.5219136444	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	194	727	20.0	-7	True	AATAAA	-18
PB.6064.5	chr19	+	3115	8	full-splice_match	PVR	ENST00000403059.8	3078	8	-38	1	-38	-1	multi-exon	FALSE	canonical	1	73204	junction_6	130563.09189125418	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	226	1344	15.0	-38	True	ATTAAA	-20
PB.6064.4	chr19	+	2842	6	full-splice_match	PVR	ENST00000406449.8	1344	6	-84	-1414	-84	-1372	multi-exon	FALSE	canonical	1	257556	junction_1	69054.5625064702	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	85	1263	0.0	-2998	False	CATAAA	-17
PB.6064.3	chr19	+	2952	6	novel_in_catalog	PVR	novel	3325	8	NA	NA	-48	-1	combination_of_known_junctions	FALSE	canonical	1	12749	junction_4	162437.74623085608	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	236	1105	15.0	-48	True	ATTAAA	-20
PB.6064.2	chr19	+	3040	8	full-splice_match	PVR	ENST00000425690.7	3325	8	284	1	-15	-1	multi-exon	FALSE	canonical	1	227318	junction_6	96295.02965514739	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	16	1269	15.0	-2929	False	ATTAAA	-20
PB.6064.1	chr19	+	3140	7	full-splice_match	PVR	ENST00000344956.8	3166	7	25	1	25	-1	multi-exon	FALSE	canonical	1	47924	junction_5	138156.80387445836	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	275	1369	15.0	-3188	False	ATTAAA	-20
PB.1973.2	chr11	+	3478	3	full-splice_match	TMEM138	ENST00000542946.1	2839	3	14	-653	-11	-2	multi-exon	FALSE	canonical	1	286432	junction_1	68287.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	186	503	15.0	1	True	AATAAA	-19
PB.9240.2	chr5	-	2482	11	full-splice_match	DEPDC1B	ENST00000265036.9	2499	11	16	1	-11	-1	multi-exon	FALSE	canonical	1	121663	junction_10	33307.05349982193	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	53	1642	10.0	-12	True	AATAAA	-22
PB.9240.3	chr5	-	2327	10	full-splice_match	DEPDC1B	ENST00000453022.6	1569	10	-42	-716	14	-1	multi-exon	FALSE	canonical	1	10497	junction_1	65401.734039948045	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	84	1487	10.0	17	False	AATAAA	-22
PB.11607.19	chr9	-	2819	1	genic	CARNMT1	novel	NA	NA	NA	NA	-10	-8766	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	77	234	193	426	75.0	-19	True	NA	NA
PB.9240.1	chr5	-	3663	10	novel_in_catalog	DEPDC1B	novel	2499	11	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	121663	junction_9	34840.061270870705	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	74	1522	10.0	27	False	AATAAA	-22
PB.6246.3	chr19	+	2133	5	novel_not_in_catalog	AC003005.1	novel	582	4	NA	NA	12186	2590	any annotated donor/acceptor	FALSE	canonical	1	58	junction_2	16165.528146336574	NA	1	1	TRUE	NA	NA	NA	A	coding	436	1311	276	1586	100.0	1	True	NA	NA
PB.9240.4	chr5	-	1974	11	full-splice_match	DEPDC1B	ENST00000265036.9	2499	11	19	506	-8	211	multi-exon	FALSE	canonical	1	121663	junction_10	33307.05349982193	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	50	1639	25.0	-9	True	ATTAAA	-20
PB.6884.17	chr2	+	3051	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-15	17093	-15	-93	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	431	2812	50.0	-3	True	NA	NA
PB.10476.2	chr7	+	2655	10	full-splice_match	FKBP9	ENST00000242209.8	3462	10	-6	813	-5	509	multi-exon	FALSE	canonical	1	5230	junction_4	248928.44431058675	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	176	1888	10.0	-41	True	NA	NA
PB.10168.1	chr6	+	3062	4	full-splice_match	FAM229B	ENST00000368656.6	2543	4	-7	-512	-7	512	multi-exon	FALSE	canonical	1	150108	junction_1	79448.52842354393	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-42	True	NA	NA
PB.1118.6	chr1	+	4085	14	novel_in_catalog	RPS6KC1	novel	4082	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	28998	junction_7	51023.810019087214	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	148	3255	25.0	0	True	AATAAA	-15
PB.42.5	chr1	-	2683	10	novel_in_catalog	WRAP73	novel	1998	11	NA	NA	-30	-9	intron_retention	FALSE	canonical	1	191395	junction_9	38817.348637044706	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	1171	2061	25.0	-1	True	AATAAA	-14
PB.1872.3	chr11	+	2609	6	novel_not_in_catalog	DNAJC24	novel	724	3	NA	NA	0	985	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	79673.78973188109	NA	21	1	TRUE	NA	NA	NA	C	coding	148	447	108	554	10.0	-18	True	AATAAA	-14
PB.1872.2	chr11	+	2414	6	novel_not_in_catalog	DNAJC24	novel	724	3	NA	NA	1	984	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	79673.78973188109	NA	5	NA	TRUE	NA	NA	NA	C	coding	148	447	109	555	5.0	-19	True	AATAAA	-13
PB.1872.1	chr11	+	3010	5	full-splice_match	DNAJC24	ENST00000465995.5	2004	5	-21	-985	-21	985	multi-exon	FALSE	canonical	1	130180	junction_3	46670.18967378963	NA	3	NA	TRUE	NA	NA	NA	C	coding	148	447	131	577	10.0	-6	True	AATAAA	-14
PB.2083.1	chr11	-	2595	10	full-splice_match	RIN1	ENST00000311320.8	2693	10	94	4	1	-4	multi-exon	FALSE	canonical	1	76377	junction_9	26752.34748208966	NA	0	NA	TRUE	NA	NA	NA	A	coding	783	2352	34	2385	10.0	-2	True	AATAAA	-38
PB.1872.7	chr11	+	2515	6	novel_not_in_catalog	DNAJC24	novel	724	3	NA	NA	1	984	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	79673.78973188109	NA	2	1	TRUE	NA	NA	NA	C	coding	148	447	92	538	5.0	-2	True	AATAAA	-13
PB.1872.6	chr11	+	2369	6	novel_not_in_catalog	DNAJC24	novel	724	3	NA	NA	0	980	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	79673.78973188109	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	102	548	20.0	-12	True	AATAAA	-9
PB.1872.5	chr11	+	2842	4	novel_in_catalog	DNAJC24	novel	724	3	NA	NA	-1	984	no_combination_of_known_junctions	FALSE	canonical	1	10928	junction_2	95938.924204702	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	1015	1341	5.0	-13	True	AATAAA	-13
PB.1872.4	chr11	+	2485	6	novel_not_in_catalog	DNAJC24	novel	724	3	NA	NA	3	980	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	79673.78973188109	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	105	551	20.0	-15	True	AATAAA	-9
PB.11290.10	chr8	-	2310	7	novel_not_in_catalog	SLC25A32	novel	2891	7	NA	NA	-3	-522	any annotated donor/acceptor	FALSE	canonical	1	8501	junction_4	136448.5087432252	NA	2	NA	TRUE	NA	NA	NA	C	coding	150	453	604	1056	50.0	-1	True	AATAAA	-24
PB.11266.3	chr8	+	3682	23	novel_not_in_catalog	VPS13B	novel	2822	18	NA	NA	-2	-14403	any annotated donor/acceptor	FALSE	canonical	1	455	junction_22	54322.86300667276	NA	1	NA	TRUE	NA	NA	NA	B	coding	1029	3090	106	3195	55.0	-2	True	NA	NA
PB.8779.50	chr4	+	3457	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	8	182	combination_of_known_junctions	FALSE	canonical	1	161024	junction_1	233560.91378880024	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	187	1863	85.0	10	True	NA	NA
PB.3433.1	chr14	+	3474	3	full-splice_match	GNG2	ENST00000335281.8	3729	3	255	0	23	0	multi-exon	FALSE	canonical	1	24445	junction_1	234695.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2	True	AATAAA	-17
PB.3433.2	chr14	+	3146	4	full-splice_match	GNG2	ENST00000556766.5	2125	4	64	-1085	-24	-328	multi-exon	FALSE	canonical	1	323332	junction_1	69608.01259593292	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-24	True	AATAAA	-4
PB.11778.4	chr9	-	2707	18	novel_in_catalog	STRBP	novel	663	5	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	113664	junction_17	120591.7740243754	NA	1	NA	TRUE	NA	NA	NA	B	coding	672	2019	309	2327	15.0	6	True	AATAAA	-18
PB.3433.3	chr14	+	3448	4	full-splice_match	GNG2	ENST00000556766.5	2125	4	90	-1413	2	0	multi-exon	FALSE	canonical	1	323332	junction_1	69608.01259593292	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2	True	AATAAA	-17
PB.3433.4	chr14	+	3456	2	full-splice_match	GNG2	ENST00000557208.1	578	2	27	-2905	22	2905	multi-exon	FALSE	canonical	1	323332	junction_1	0.0	NA	13	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1	True	NA	NA
PB.11918.3	chr9	+	2701	13	full-splice_match	MAN1B1	ENST00000544448.5	2090	13	-21	-590	-21	0	multi-exon	FALSE	canonical	1	31944	junction_10	160806.598038585	NA	2	1	TRUE	NA	NA	NA	C	coding	550	1653	37	1689	15.0	-21	True	GATAAA	-15
PB.5349.1	chr17	-	2129	3	novel_in_catalog	AC132938.3	novel	357	3	NA	NA	32	1060	combination_of_known_junctions	FALSE	canonical	1	10995	junction_1	2499.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.7160.15	chr20	-	3939	16	novel_in_catalog	SLC23A2	novel	6944	17	NA	NA	-3	-2746	no_combination_of_known_junctions	FALSE	canonical	1	1130	junction_14	64477.063942528344	NA	5	1	TRUE	NA	NA	NA	C	coding	594	1785	285	2069	40.0	-1	True	AGTAAA	-14
PB.7160.14	chr20	-	4245	18	novel_not_in_catalog	SLC23A2	novel	6944	17	NA	NA	-10	-2746	any annotated donor/acceptor	FALSE	canonical	1	1538	junction_16	73777.41036856771	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	459	2375	40.0	-8	True	AGTAAA	-14
PB.1051.30	chr1	+	4768	20	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	19678	junction_7	187136.25877822947	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	611	3043	25.0	25	False	AATAAA	-18
PB.7160.16	chr20	-	3829	17	full-splice_match	SLC23A2	ENST00000338244.5	6944	17	-22	3137	-22	-3137	multi-exon	FALSE	canonical	1	98118	junction_16	46336.082643171765	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	434	2350	5.0	8791	False	ACTAAA	-17
PB.7160.11	chr20	-	4492	17	full-splice_match	SLC23A2	ENST00000338244.5	6944	17	-10	2462	-10	-2462	multi-exon	FALSE	canonical	1	98118	junction_16	46336.082643171765	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	422	2338	20.0	-8	True	AATAAA	-13
PB.3433.6	chr14	+	3593	3	novel_not_in_catalog	GNG2	novel	577	4	NA	NA	-7399	-1	intron_retention	FALSE	canonical	1	965	junction_1	246435.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-308	False	AATAAA	-22
PB.7160.13	chr20	-	4087	16	novel_in_catalog	SLC23A2	novel	6944	17	NA	NA	-11	-2741	no_combination_of_known_junctions	FALSE	canonical	1	13767	junction_15	60107.287304027355	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	296	2212	25.0	-9	True	AGTAAA	-19
PB.7160.12	chr20	-	4220	17	novel_in_catalog	SLC23A2	novel	6944	17	NA	NA	-16	-2736	no_combination_of_known_junctions	FALSE	canonical	1	66234	junction_16	50179.36100314146	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	424	2340	20.0	-14	True	AGTAAA	-24
PB.10501.1	chr7	-	3382	2	full-splice_match	MPLKIP	ENST00000645701.1	941	2	8	-2449	8	2449	multi-exon	FALSE	canonical	1	620262	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	78	617	40.0	-23	True	AGTAAA	-19
PB.1051.38	chr1	+	2049	1	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	0	914	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	31	False	AATAAA	-19
PB.10501.2	chr7	-	1876	1	novel_in_catalog	MPLKIP	novel	7661	2	NA	NA	33	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	131	396	53	448	10.0	2	True	AATAAA	-15
PB.7160.19	chr20	-	2433	17	full-splice_match	SLC23A2	ENST00000338244.5	6944	17	-8	4519	-8	2492	multi-exon	FALSE	canonical	1	98118	junction_16	46336.082643171765	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	420	2336	20.0	-6	True	AGTAAA	-24
PB.7160.18	chr20	-	3448	17	full-splice_match	SLC23A2	ENST00000338244.5	6944	17	19	3477	19	-3477	multi-exon	FALSE	canonical	1	98118	junction_16	46336.082643171765	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	393	2309	30.0	-1	True	NA	NA
PB.11941.1	chrY	+	1301	10	full-splice_match	IL3RA	ENST00000381469.7_PAR_Y	1476	10	171	4	-9	0	multi-exon	FALSE	canonical	1	11	junction_2	52.84942505264425	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	179	1081	10.0	NA	False	GATAAA	-20
PB.11287.2	chr8	-	3448	3	novel_not_in_catalog	BAALC-AS1	novel	1353	6	NA	NA	-21	2035	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	4176.5	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-68	False	NA	NA
PB.6497.14	chr2	+	2039	7	incomplete-splice_match	EHBP1	ENST00000405482.5	1311	9	61	32660	1	5663	3prime_fragment	FALSE	canonical	1	6325	junction_1	97043.0551366248	NA	0	NA	TRUE	NA	NA	NA	C	coding	215	648	320	967	50.0	-26	True	AATAAA	-23
PB.11840.2	chr9	-	2688	14	full-splice_match	CRAT	ENST00000318080.6	2763	14	89	-14	-4	14	multi-exon	FALSE	canonical	1	132476	junction_13	113281.89820466495	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	207	2087	30.0	66	True	AATAAA	-18
PB.11877.3	chr9	-	1989	5	full-splice_match	SURF6	ENST00000372022.5	4447	5	219	2239	219	793	multi-exon	FALSE	canonical	1	320420	junction_2	27116.108914951274	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	48	1133	30.0	8	True	AATAAA	-13
PB.3475.1	chr14	-	1244	7	full-splice_match	DHRS7	ENST00000557185.5	1322	7	38	40	27	-18	multi-exon	FALSE	canonical	1	882086	junction_6	306956.24343458505	NA	0	NA	TRUE	NA	NA	NA	A	coding	339	1020	83	1102	80.0	-8	True	AATAGA	-27
PB.1039.1	chr1	-	2754	11	full-splice_match	PTPN7	ENST00000495688.5	2689	11	-64	-1	-14	-1	multi-exon	TRUE	canonical	1	11353	junction_1	81120.44944130919	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	167	1249	10.0	1416	False	AATAAA	-21
PB.9143.2	chr5	-	1765	4	full-splice_match	FAM173B	ENST00000510047.5	1160	4	10	-615	1	-11	multi-exon	FALSE	canonical	1	30101	junction_1	57971.32628195502	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	15	665	35.0	0	True	ACTAAA	-6
PB.9143.1	chr5	-	1827	5	full-splice_match	FAM173B	ENST00000511437.5	1423	5	-2	-402	0	-1	multi-exon	FALSE	canonical	1	55456	junction_4	39668.982085345975	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	16	717	20.0	-1	True	TATAAA	-8
PB.7954.1	chr3	+	2571	15	full-splice_match	NR2C2	ENST00000323373.10	2406	15	-172	7	-27	5	multi-exon	FALSE	canonical	1	35473	junction_3	59990.497656899366	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	390	2237	35.0	0	True	ATTAAA	-18
PB.7954.2	chr3	+	8477	15	full-splice_match	NR2C2	ENST00000323373.10	2406	15	-148	-5923	-3	-1	multi-exon	FALSE	canonical	1	35473	junction_3	59990.497656899366	NA	7	NA	TRUE	NA	NA	NA	C	coding	615	1848	366	2213	20.0	-3	True	ATTAAA	-17
PB.7954.3	chr3	+	8415	14	full-splice_match	NR2C2	ENST00000425241.5	2494	14	1	-5922	1	-2	multi-exon	FALSE	canonical	1	55772	junction_1	44042.17879669173	NA	5	1	TRUE	NA	NA	NA	C	coding	596	1791	362	2152	25.0	1	True	ATTAAA	-16
PB.7265.48	chr20	-	2913	4	incomplete-splice_match	RBM39	ENST00000374038.7	1026	9	-9	7797	7	-192	3prime_fragment	FALSE	canonical	1	524165	junction_2	297602.6880885916	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	AATAAA	-14
PB.7265.49	chr20	-	3012	3	incomplete-splice_match	RBM39	ENST00000463004.5	4580	16	-24	27755	-2	-4	3prime_fragment	FALSE	canonical	1	963480	junction_1	142066.5	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-15
PB.10075.2	chr6	-	2227	6	full-splice_match	ELOVL4	ENST00000369816.4	3042	6	-16	831	-16	-831	multi-exon	FALSE	canonical	1	99765	junction_3	13906.892627758367	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	318	1262	45.0	2058	False	AATAAA	-9
PB.7265.44	chr20	-	1950	18	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	4447	junction_17	492828.75346755155	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	205	1797	20.0	-3	True	AATAAA	-13
PB.7265.45	chr20	-	3728	18	novel_in_catalog	RBM39	novel	5914	18	NA	NA	1	-22	intron_retention	FALSE	canonical	1	21894	junction_6	503237.7751872761	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	2356	3099	70.0	28	True	NA	NA
PB.7265.46	chr20	-	2231	19	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-3	-22	combination_of_known_junctions	FALSE	canonical	1	21894	junction_6	494205.103771466	NA	2	1	TRUE	NA	NA	NA	C	coding	247	744	859	1602	70.0	18	True	NA	NA
PB.7265.47	chr20	-	3588	17	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	212934	junction_1	407812.16024540924	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	2381	3484	20.0	3	True	AATAAA	-20
PB.7265.40	chr20	-	2086	17	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	7236	junction_15	473468.2932558684	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1593	341	1933	20.0	-8	True	AATAAA	-13
PB.7265.41	chr20	-	2027	19	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	4447	junction_18	476347.6255882674	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	753	1874	20.0	-7	True	AATAAA	-13
PB.7265.42	chr20	-	2013	16	full-splice_match	RBM39	ENST00000528062.7	2421	16	-22	430	-2	0	multi-exon	FALSE	canonical	1	93647	junction_12	466662.38592595677	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	334	1860	20.0	-1	True	AATAAA	-13
PB.7265.43	chr20	-	1937	18	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	4447	junction_17	471255.17286845803	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	210	1784	20.0	-8	True	AATAAA	-13
PB.1591.12	chr10	-	1769	9	full-splice_match	COX15	ENST00000016171.5	2356	9	-26	613	-26	524	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	78	1310	70.0	-32	True	NA	NA
PB.1591.11	chr10	-	2315	9	full-splice_match	COX15	ENST00000016171.5	2356	9	-32	73	-32	-73	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	84	1316	50.0	-38	True	NA	NA
PB.1591.10	chr10	-	2624	9	full-splice_match	COX15	ENST00000016171.5	2356	9	-17	-251	-17	251	multi-exon	FALSE	canonical	1	209736	junction_1	50671.07245247899	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	69	1301	35.0	-23	True	NA	NA
PB.6085.10	chr19	-	2638	19	novel_not_in_catalog	EML2	novel	2364	19	NA	NA	-61	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	149464.81477501115	NA	26	1	TRUE	NA	NA	NA	C	coding	564	1695	117	1811	20.0	1	True	AATAAA	-12
PB.8343.4	chr3	-	1738	1	full-splice_match	WDR5B	ENST00000330689.5	3720	1	-34	2016	-34	-2016	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	330	993	558	1550	25.0	-24	True	AAAAAG	-29
PB.8343.3	chr3	-	1900	1	full-splice_match	WDR5B	ENST00000330689.5	3720	1	-45	1865	-45	-1865	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	330	993	569	1561	20.0	-35	True	NA	NA
PB.8343.2	chr3	-	2062	1	full-splice_match	WDR5B	ENST00000330689.5	3720	1	-28	1686	-28	-1686	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	330	993	552	1544	15.0	-18	True	NA	NA
PB.8343.1	chr3	-	3646	1	full-splice_match	WDR5B	ENST00000330689.5	3720	1	-20	94	-20	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	330	993	544	1536	35.0	-10	True	NA	NA
PB.637.7	chr1	+	3198	5	novel_not_in_catalog	VANGL1	novel	8691	8	NA	NA	-1457	1840	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	57659.496776333384	NA	2	NA	TRUE	NA	NA	NA	C	coding	256	771	113	883	15.0	-1538	False	AATAAA	-22
PB.3477.12	chr14	+	3115	3	incomplete-splice_match	PPM1A	ENST00000395076.8	8184	6	-17	11630	-17	-1098	3prime_fragment	FALSE	canonical	1	146045	junction_1	300210.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	448	1422	50.0	30	True	AATAAA	-27
PB.3477.13	chr14	+	3918	3	incomplete-splice_match	PPM1A	ENST00000395076.8	8184	6	275	10535	102	-3	3prime_fragment	FALSE	canonical	1	146045	junction_1	300210.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	324	975	156	1130	25.0	23	True	AATAAA	-16
PB.3477.10	chr14	+	2157	7	novel_not_in_catalog	PPM1A	novel	1713	6	NA	NA	-38	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	259903.4945030345	NA	2	1	TRUE	NA	NA	NA	C	coding	382	1149	146	1294	55.0	9	True	AATAAA	-13
PB.3477.11	chr14	+	2710	8	novel_in_catalog	PPM1A	novel	1713	6	NA	NA	-26	2	no_combination_of_known_junctions	FALSE	canonical	1	1903	junction_1	291353.4357868744	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	687	1835	30.0	21	True	AATAAA	-25
PB.3477.17	chr14	+	6920	4	incomplete-splice_match	PPM1A	ENST00000395076.8	8184	6	36354	2	28860	-2	5prime_fragment	FALSE	canonical	1	380501	junction_1	97083.53072254611	NA	2	NA	TRUE	NA	NA	NA	C	coding	99	300	18	317	25.0	-7046	False	AATAAA	-14
PB.3477.14	chr14	+	2219	7	novel_not_in_catalog	PPM1A	novel	1713	6	NA	NA	2	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	259903.4945030345	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	211	1359	60.0	49	True	AATAAA	-10
PB.10682.1	chr7	+	2643	10	incomplete-splice_match	PPP1R9A	ENST00000424654.5	4058	18	-38	38563	0	-38563	3prime_fragment	FALSE	canonical	1	10985	junction_1	18557.2386355777	NA	0	NA	TRUE	NA	NA	NA	A	coding	787	2361	283	2643	70.0	43	True	NA	NA
PB.10069.1	chr6	-	5052	1	intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATACA	-14
PB.6828.10	chr2	+	2135	8	full-splice_match	GORASP2	ENST00000493692.5	951	8	47	-1231	-21	-7	multi-exon	FALSE	canonical	1	10996	junction_5	538308.6717511523	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	42	1061	50.0	2	True	ATTAAA	-21
PB.7962.5	chr3	-	1892	17	full-splice_match	HACL1	ENST00000321169.9	2266	17	255	119	-7	-16	multi-exon	FALSE	canonical	1	169779	junction_10	63977.61755538025	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	114	1850	35.0	-8	True	AATAAA	-38
PB.7962.4	chr3	-	1856	16	full-splice_match	HACL1	ENST00000456194.6	1880	16	0	24	0	-24	multi-exon	FALSE	canonical	1	10849	junction_13	87960.96033769123	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	107	1762	70.0	-1	True	NA	NA
PB.7962.3	chr3	-	5018	16	novel_in_catalog	HACL1	novel	2266	17	NA	NA	0	-24	intron_retention	FALSE	canonical	1	169779	junction_9	64260.59278676681	NA	2	NA	TRUE	NA	NA	NA	C	coding	379	1140	107	1246	70.0	-1	True	NA	NA
PB.7962.2	chr3	-	1715	14	full-splice_match	HACL1	ENST00000451445.6	1734	14	20	-1	2	1	multi-exon	FALSE	canonical	1	6189	junction_10	92277.70712481436	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	105	1595	40.0	1	True	AATAAA	-19
PB.7962.1	chr3	-	1937	17	full-splice_match	HACL1	ENST00000321169.9	2266	17	262	67	0	-24	multi-exon	FALSE	canonical	1	169779	junction_10	63977.61755538025	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	107	1843	70.0	-1	True	NA	NA
PB.11955.1	chrX	+	4981	11	novel_not_in_catalog	STS	novel	6521	10	NA	NA	-72165	-1750	any annotated donor/acceptor	FALSE	canonical	1	27238	junction_1	33280.14430617752	NA	1	NA	TRUE	NA	NA	NA	B	coding	590	1773	410	2182	35.0	0	True	AATAAA	-16
PB.9874.9	chr6	-	3699	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	97477	junction_20	584227.916865154	NA	1	NA	TRUE	NA	NA	NA	C	coding	1108	3327	271	3597	25.0	4	True	AATAAA	-30
PB.6671.6	chr2	-	2883	12	novel_not_in_catalog	TGFBRAP1	novel	5595	11	NA	NA	356	-30	intron_retention	FALSE	canonical	1	17465	junction_11	62882.09148507379	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	69	2651	65.0	7814	False	NA	NA
PB.11955.2	chrX	+	4954	11	novel_not_in_catalog	STS	novel	6521	10	NA	NA	-71656	-1749	any annotated donor/acceptor	FALSE	canonical	1	41896	junction_1	29646.73185968396	NA	0	NA	TRUE	NA	NA	NA	B	coding	590	1773	382	2154	40.0	-53	True	AATAAA	-17
PB.637.4	chr1	+	4168	8	full-splice_match	VANGL1	ENST00000355485.6	8691	8	4	4519	4	1851	multi-exon	FALSE	canonical	1	46602	junction_1	38560.48695549498	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	268	1842	25.0	-13	True	AATAAA	-33
PB.9874.8	chr6	-	3707	26	novel_in_catalog	BAG6	novel	488	2	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	10109	junction_25	561970.3291845134	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	117	3605	25.0	-17	True	AATAAA	-30
PB.8685.1	chr4	+	1456	3	full-splice_match	MRFAP1	ENST00000320912.8	2049	3	589	4	-6	-4	multi-exon	FALSE	canonical	1	205084	junction_1	1448874.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	65	448	65.0	-5	True	AATAAA	-17
PB.11587.3	chr9	+	3994	5	full-splice_match	ZNF658	ENST00000621410.4	4025	5	20	11	11	2	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	139	3312	20.0	NA	False	AATAAA	-22
PB.2957.1	chr12	-	2182	3	novel_in_catalog	POP5	novel	913	4	NA	NA	5	19	intron_retention	FALSE	canonical	1	588005	junction_2	73348.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	1552	1890	30.0	4	True	AATAAA	-40
PB.2957.2	chr12	-	2265	2	full-splice_match	POP5	ENST00000539716.1	718	2	3	-1550	3	-1	multi-exon	FALSE	canonical	1	588005	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	2	True	AATAAA	-20
PB.2957.3	chr12	-	1997	4	novel_in_catalog	POP5	novel	913	4	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	532811	junction_2	85196.74180389765	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7	True	AATAAA	-20
PB.7.11	chr1	-	2748	19	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	-14	-9	any annotated donor/acceptor	FALSE	canonical	1	4537	junction_7	237994.73114295106	NA	1	NA	TRUE	NA	NA	NA	B	coding	745	2238	31	2268	10.0	-15	True	AATAAA	-18
PB.7.10	chr1	-	2835	20	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	14	0	any annotated donor/acceptor	FALSE	canonical	1	27852	junction_13	240058.98954885823	NA	1	NA	TRUE	NA	NA	NA	B	coding	769	2310	37	2346	15.0	-21	True	AATAAA	-27
PB.9874.5	chr6	-	3694	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	559348	junction_10	534298.3414274835	NA	1	NA	TRUE	NA	NA	NA	C	coding	1113	3342	251	3592	25.0	0	True	AATAAA	-30
PB.5872.5	chr19	-	3757	4	full-splice_match	ZNF737	ENST00000427401.8	2867	4	-64	-826	10	826	multi-exon	FALSE	canonical	1	50096	junction_3	21446.10686244838	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	160	1770	55.0	-1	True	ATTAAA	-9
PB.5872.4	chr19	-	3684	5	novel_not_in_catalog	ZNF737	novel	417	2	NA	NA	-8	849	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	34385.16945937594	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	148	1674	25.0	-7	True	AATAAA	-16
PB.5872.3	chr19	-	2803	6	novel_not_in_catalog	ZNF737	novel	417	2	NA	NA	-13	1715	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	36712.64448333843	NA	8	1	TRUE	NA	NA	NA	C	coding	508	1527	183	1709	25.0	-3	True	AATAAA	-15
PB.5872.2	chr19	-	2583	6	novel_not_in_catalog	ZNF737	novel	417	2	NA	NA	-1	970	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	36712.64448333843	NA	10	1	TRUE	NA	NA	NA	C	coding	522	1569	141	1709	50.0	0	True	AATAAA	-12
PB.5872.1	chr19	-	2943	5	novel_not_in_catalog	ZNF737	novel	417	2	NA	NA	-8	970	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	34385.16945937594	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	148	1716	50.0	-7	True	AATAAA	-12
PB.9874.4	chr6	-	3747	26	novel_in_catalog	BAG6	novel	488	2	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	436020	junction_25	525269.4461589723	NA	2	NA	TRUE	NA	NA	NA	C	coding	1162	3489	157	3645	25.0	-1	True	AATAAA	-30
PB.8748.16	chr4	-	4675	33	novel_not_in_catalog	PDS5A	novel	7176	33	NA	NA	107	-1937	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_32	138117.14063340952	NA	0	NA	TRUE	NA	NA	NA	C	coding	1297	3894	97	3990	35.0	61	True	ATTAAA	-21
PB.8748.17	chr4	-	3283	27	incomplete-splice_match	PDS5A	ENST00000303538.12	7176	33	377	26756	-69	-12607	3prime_fragment	FALSE	canonical	1	258091	junction_26	98993.83681006962	NA	1	NA	TRUE	NA	NA	NA	C	coding	1040	3120	164	3283	60.0	384	False	NA	NA
PB.8748.15	chr4	-	5078	33	full-splice_match	PDS5A	ENST00000303538.12	7176	33	364	1734	-82	-1734	multi-exon	FALSE	canonical	1	258091	junction_32	113740.69254359617	NA	3	NA	TRUE	NA	NA	NA	C	coding	1337	4014	177	4190	65.0	16	True	NA	NA
PB.12335.1	chrX	+	2293	4	full-splice_match	SSR4	ENST00000460616.5	2482	4	201	-12	181	0	multi-exon	FALSE	canonical	1	5559192	junction_1	87852.27483426685	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1	450	5.0	-1604	False	AATAAA	-34
PB.12335.2	chrX	+	2304	5	full-splice_match	SSR4	ENST00000485612.5	701	5	-1595	-8	-2	0	multi-exon	FALSE	canonical	1	3483449	junction_4	942462.1012885611	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	1900	2232	5.0	-11	True	AATAAA	-34
PB.3740.1	chr15	-	6645	27	full-splice_match	TJP1	ENST00000614355.4	6977	27	332	0	-143	0	multi-exon	FALSE	canonical	1	158688	junction_26	78837.28420329923	NA	1	NA	TRUE	NA	NA	NA	C	coding	1688	5067	144	5210	35.0	-57	True	AATAAA	-8
PB.10281.3	chr6	+	3390	28	full-splice_match	MTHFD1L	ENST00000367321.7	3604	28	161	53	-6	-51	multi-exon	FALSE	canonical	1	139640	junction_21	104996.58877552436	NA	4	2	TRUE	NA	NA	NA	C	coding	978	2937	114	3050	15.0	0	True	ACTAAA	-21
PB.3740.3	chr15	-	6571	27	novel_in_catalog	TJP1	novel	7950	28	NA	NA	-108	0	combination_of_known_junctions	FALSE	canonical	1	129379	junction_1	83316.47622087666	NA	2	NA	TRUE	NA	NA	NA	C	coding	1675	5028	109	5136	35.0	-22	True	AATAAA	-8
PB.3740.2	chr15	-	6858	27	full-splice_match	TJP1	ENST00000545208.6	5007	27	-416	-1435	58	0	multi-exon	FALSE	canonical	1	124086	junction_1	83742.80330478954	NA	1	NA	TRUE	NA	NA	NA	C	coding	1668	5007	417	5423	35.0	14	True	AATAAA	-8
PB.3740.5	chr15	-	5151	27	full-splice_match	TJP1	ENST00000545208.6	5007	27	-87	-57	-87	57	multi-exon	FALSE	canonical	1	124086	junction_1	83742.80330478954	NA	3	NA	TRUE	NA	NA	NA	C	coding	1668	5007	88	5094	40.0	-1	True	ATTAAA	-15
PB.10281.4	chr6	+	2547	21	novel_not_in_catalog	MTHFD1L	novel	3604	28	NA	NA	14	-25799	any annotated donor/acceptor	FALSE	canonical	1	8198	junction_20	118748.70610995094	NA	6	1	TRUE	NA	NA	NA	C	coding	710	2133	94	2226	35.0	20	True	AATAAA	-15
PB.10281.5	chr6	+	3234	28	novel_in_catalog	MTHFD1L	novel	3604	28	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	8188	junction_1	118539.53783891883	NA	6	1	TRUE	NA	NA	NA	C	coding	868	2607	240	2846	35.0	-9	True	AATAAA	-15
PB.172.7	chr1	-	3641	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-14	-119	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	392923.8949630832	NA	1	1	TRUE	NA	NA	NA	C	coding	120	363	628	990	35.0	-17	True	AATAAA	-19
PB.10281.9	chr6	+	1931	16	incomplete-splice_match	MTHFD1L	ENST00000618312.4	3159	28	72364	6	33027	-6	5prime_fragment	FALSE	canonical	1	139640	junction_9	92965.16540645152	NA	2	NA	TRUE	NA	NA	NA	C	coding	501	1506	41	1546	45.0	3919	False	AATAAA	-12
PB.1039.5	chr1	-	2784	10	full-splice_match	PTPN7	ENST00000309017.7	3765	10	977	4	1	-2	multi-exon	FALSE	canonical	1	142848	junction_8	47873.44490721292	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	113	1195	15.0	-3	True	AATAAA	-18
PB.5451.9	chr18	-	2929	10	full-splice_match	SLC39A6	ENST00000269187.9	3543	10	-29	643	-29	-27	multi-exon	FALSE	canonical	1	457822	junction_9	150014.91254316462	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	244	2511	70.0	-11	True	AAGAAA	-20
PB.7849.2	chr22	+	2259	9	full-splice_match	PNPLA3	ENST00000216180.7	2805	9	39	507	-14	0	multi-exon	FALSE	canonical	1	21438	junction_1	13771.225208178646	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	135	1580	65.0	-27	True	NA	NA
PB.7849.1	chr22	+	2573	9	full-splice_match	PNPLA3	ENST00000216180.7	2805	9	23	209	23	-209	multi-exon	FALSE	canonical	1	21438	junction_1	13771.225208178646	NA	2	NA	TRUE	NA	NA	NA	C	coding	481	1446	151	1596	85.0	1	True	NA	NA
PB.3687.22	chr14	+	2636	18	novel_in_catalog	KLC1	novel	540	3	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	23286	junction_16	538231.4257349704	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	304	2205	25.0	-6	True	ATTAAA	-14
PB.3687.23	chr14	+	2562	15	novel_in_catalog	KLC1	novel	540	3	NA	NA	2	-5	no_combination_of_known_junctions	FALSE	canonical	1	8044	junction_14	474792.72206225496	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	304	2109	25.0	-6	True	CATAAA	-16
PB.3687.20	chr14	+	2507	14	novel_in_catalog	KLC1	novel	540	3	NA	NA	1	18	no_combination_of_known_junctions	FALSE	canonical	1	69577	junction_13	400087.1877479595	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	305	1921	0.0	-7	True	AATAAA	-19
PB.3687.21	chr14	+	2850	14	full-splice_match	KLC1	ENST00000553286.5	3135	14	-32	317	2	-2	multi-exon	FALSE	canonical	1	213833	junction_13	370377.56883620494	NA	1	1	TRUE	NA	NA	NA	C	coding	556	1671	304	1974	50.0	-6	True	AATAAA	-16
PB.3687.26	chr14	+	3147	14	novel_in_catalog	KLC1	novel	540	3	NA	NA	0	13	intron_retention	FALSE	canonical	1	351660	junction_13	343613.2750138957	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	298	1941	5.0	0	True	AATAAA	-14
PB.3687.27	chr14	+	2549	17	full-splice_match	KLC1	ENST00000334553.10	2524	17	-26	1	0	-1	multi-exon	FALSE	canonical	1	28043	junction_15	515466.0802395852	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	298	2205	25.0	0	True	ATTAAA	-15
PB.3687.24	chr14	+	3622	15	novel_in_catalog	KLC1	novel	540	3	NA	NA	3	1120	combination_of_known_junctions	FALSE	canonical	1	4959	junction_13	476148.17447183095	NA	5	NA	TRUE	NA	NA	NA	C	coding	556	1671	303	1973	15.0	-5	True	ATTAAA	-26
PB.3687.25	chr14	+	3846	13	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	1	1683	any annotated donor/acceptor	FALSE	canonical	1	228587	junction_12	375465.8519034129	NA	1	NA	TRUE	NA	NA	NA	C	coding	573	1722	297	2018	20.0	1	True	NA	NA
PB.3687.28	chr14	+	2431	16	novel_not_in_catalog	KLC1	novel	540	3	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	106207	junction_13	509501.37653755385	NA	34	3	TRUE	NA	NA	NA	C	coding	597	1794	298	2091	25.0	0	True	ATTAAA	-15
PB.3687.29	chr14	+	2324	15	full-splice_match	KLC1	ENST00000557450.5	2265	15	-30	-29	0	-1	multi-exon	FALSE	canonical	1	103055	junction_13	425991.0583569405	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	298	1980	25.0	0	True	ATTAAA	-15
PB.8156.1	chr3	-	1949	3	intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	551	junction_1	409.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	NA	NA
PB.5913.2	chr19	+	5621	14	full-splice_match	KIAA0355	ENST00000299505.6	6717	14	18	1078	3	-1078	multi-exon	FALSE	canonical	1	68097	junction_1	36977.8825962463	NA	3	NA	TRUE	NA	NA	NA	C	coding	1070	3213	856	4068	60.0	-11	True	NA	NA
PB.821.17	chr1	-	3951	4	novel_in_catalog	SMG5	novel	4559	22	NA	NA	-7	-7603	intron_retention	FALSE	canonical	1	329560	junction_3	117462.05438447866	NA	3	NA	TRUE	NA	NA	NA	C	coding	187	564	153	716	100.0	-8	True	NA	NA
PB.637.3	chr1	+	5865	8	full-splice_match	VANGL1	ENST00000355485.6	8691	8	73	2753	35	-2753	multi-exon	FALSE	canonical	1	46602	junction_1	38560.48695549498	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	199	1773	15.0	0	True	AATAAA	-19
PB.9558.9	chr5	+	2404	7	incomplete-splice_match	HMGXB3	ENST00000502717.5	4974	20	40027	-304	-6740	-15	5prime_fragment	FALSE	canonical	1	344383	junction_5	30524.016180796974	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	234	1469	15.0	-4941	False	AATAAA	-13
PB.9605.2	chr5	+	2442	7	full-splice_match	CCNG1	ENST00000340828.6	2458	7	14	2	0	0	multi-exon	FALSE	canonical	1	1072945	junction_2	241987.7590324675	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	211	1098	10.0	0	True	AATAAA	-14
PB.9605.1	chr5	+	1932	9	novel_not_in_catalog	CCNG1	novel	919	6	NA	NA	-1	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	677214.5075389702	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	112	999	10.0	-1	True	AATAAA	-14
PB.11722.25	chr9	-	3515	14	novel_in_catalog	PTBP3	novel	7995	14	NA	NA	-32	62	combination_of_known_junctions	FALSE	canonical	1	155889	junction_12	138659.42233767512	NA	2	NA	TRUE	NA	NA	NA	C	coding	521	1566	282	1847	10.0	-81	False	TTTAAA	-21
PB.10016.10	chr6	-	2909	2	novel_in_catalog	SLC35B2	novel	1859	3	NA	NA	18	-1	intron_retention	FALSE	canonical	1	278602	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	1411	2310	10.0	-9	True	ATTAAA	-13
PB.9605.5	chr5	+	2230	6	novel_in_catalog	CCNG1	novel	919	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	13740	junction_5	588749.8630261922	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	195	920	10.0	16	True	AATAAA	-13
PB.9605.4	chr5	+	2032	8	novel_in_catalog	CCNG1	novel	919	6	NA	NA	0	1	intron_retention	FALSE	canonical	1	82920	junction_7	553041.8137712075	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	211	1098	5.0	0	True	AATAAA	-15
PB.7219.2	chr20	-	3162	8	novel_not_in_catalog	FRG1CP	novel	769	9	NA	NA	-78	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	127	384	261	644	20.0	NA	False	AATAAA	-26
PB.5844.1	chr19	-	3881	12	full-splice_match	ELL	ENST00000262809.8	4027	12	57	89	-3	-87	multi-exon	FALSE	canonical	1	110647	junction_6	36467.76331374654	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	16	1881	35.0	-1	True	NA	NA
PB.4092.1	chr15	+	4306	5	incomplete-splice_match	CHD2	ENST00000625662.2	5127	12	12073	5	-3283	-5	5prime_fragment	FALSE	canonical	1	314939	junction_1	63268.94899356239	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	13	1074	30.0	NA	False	ATTAAA	-14
PB.5844.4	chr19	-	2247	12	full-splice_match	ELL	ENST00000262809.8	4027	12	52	1728	-8	125	multi-exon	FALSE	canonical	1	110647	junction_6	36467.76331374654	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	21	1886	20.0	-6	True	NA	NA
PB.5844.5	chr19	-	1978	12	full-splice_match	ELL	ENST00000262809.8	4027	12	58	1991	-2	97	multi-exon	FALSE	canonical	1	110647	junction_6	36467.76331374654	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	15	1880	15.0	0	True	AATAAA	-20
PB.7219.4	chr20	-	3178	8	novel_not_in_catalog	FRG1CP	novel	769	9	NA	NA	-71	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	153	462	354	815	20.0	NA	False	AATAAA	-26
PB.7219.5	chr20	-	2274	9	novel_not_in_catalog	FRG1CP	novel	769	9	NA	NA	-179	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	127	384	362	745	20.0	NA	False	AATAAA	-26
PB.1039.7	chr1	-	2796	10	novel_in_catalog	PTPN7	novel	3265	9	NA	NA	1	-5	intron_retention	FALSE	canonical	1	2125	junction_9	86956.8507236651	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	128	1210	10.0	-3	True	AATAAA	-15
PB.717.2	chr1	+	2247	15	novel_in_catalog	VPS45	novel	2315	15	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	3792	junction_5	106203.47227069386	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	82	1722	40.0	-10	True	AATAAA	-14
PB.10295.1	chr6	-	5794	7	full-splice_match	TFB1M	ENST00000367166.4	1424	7	-8	-4362	1	4362	multi-exon	FALSE	canonical	1	188398	junction_4	28895.542157148666	NA	34	1	TRUE	NA	NA	NA	C	coding	346	1041	65	1105	40.0	-9	True	NA	NA
PB.8057.2	chr3	+	7555	6	full-splice_match	ZNF197	ENST00000344387.8	3275	6	-35	-4245	-14	-6	multi-exon	FALSE	canonical	1	41744	junction_1	29310.21191735058	NA	0	NA	TRUE	NA	NA	NA	C	coding	1029	3090	221	3310	30.0	-64	False	NA	NA
PB.10295.3	chr6	-	1311	7	full-splice_match	TFB1M	ENST00000367166.4	1424	7	-35	148	-26	-4	multi-exon	FALSE	canonical	1	188398	junction_4	28895.542157148666	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	92	1132	35.0	-1	True	AATAAA	-22
PB.10295.2	chr6	-	2806	7	full-splice_match	TFB1M	ENST00000367166.4	1424	7	-8	-1374	1	1374	multi-exon	FALSE	canonical	1	188398	junction_4	28895.542157148666	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	65	1105	25.0	-9	True	AATAAA	-19
PB.10295.5	chr6	-	2112	6	novel_in_catalog	TFB1M	novel	1424	7	NA	NA	12	13098	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	103678.80801591037	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	437	856	90.0	11	True	NA	NA
PB.10295.4	chr6	-	1031	7	full-splice_match	TFB1M	ENST00000367166.4	1424	7	8	385	8	83	multi-exon	FALSE	canonical	1	188398	junction_4	28895.542157148666	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	981	49	1029	70.0	7	True	NA	NA
PB.8057.5	chr3	+	2796	1	novel_in_catalog	ZNF197	novel	546	3	NA	NA	-5	-1560	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	101	306	228	533	95.0	-1	True	NA	NA
PB.10295.6	chr6	-	2027	5	incomplete-splice_match	TFB1M	ENST00000367166.4	1424	7	-10	26354	-1	13098	3prime_fragment	FALSE	canonical	1	188398	junction_2	15296.83974715039	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	67	771	90.0	-11	True	NA	NA
PB.9538.4	chr5	+	1951	12	novel_not_in_catalog	ARHGAP26	novel	9395	23	NA	NA	-793	-18	any annotated donor/acceptor	FALSE	canonical	1	559	junction_1	45361.30519606892	NA	0	NA	TRUE	NA	NA	NA	B	coding	332	999	223	1221	75.0	-2313	False	NA	NA
PB.9538.5	chr5	+	2678	9	novel_not_in_catalog	ARHGAP26	novel	9395	23	NA	NA	-373	6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	47737.80151253302	NA	1	NA	TRUE	NA	NA	NA	B	coding	294	885	84	968	35.0	-1337	False	GATAAA	-27
PB.9538.6	chr5	+	2757	8	incomplete-splice_match	ARHGAP26	ENST00000645722.1	3383	23	285482	-963	-194	7	5prime_fragment	FALSE	canonical	1	79264	junction_6	27053.50022998646	NA	0	NA	TRUE	NA	NA	NA	B	coding	301	906	141	1046	35.0	-1158	False	GATAAA	-28
PB.9538.7	chr5	+	1931	8	incomplete-splice_match	ARHGAP26	ENST00000645722.1	3383	23	285338	7	-338	-7	5prime_fragment	FALSE	canonical	1	79264	junction_6	27053.50022998646	NA	0	NA	TRUE	NA	NA	NA	B	coding	301	906	285	1190	75.0	-1302	False	NA	NA
PB.9538.1	chr5	+	3129	11	novel_not_in_catalog	ARHGAP26	novel	9395	23	NA	NA	11427	7	any annotated donor/acceptor	FALSE	canonical	1	571	junction_1	47525.70010478541	NA	0	NA	TRUE	NA	NA	NA	B	coding	332	999	420	1418	35.0	-3917	False	GATAAA	-28
PB.9538.2	chr5	+	4272	13	novel_not_in_catalog	ARHGAP26	novel	9395	23	NA	NA	11445	1072	any annotated donor/acceptor	FALSE	canonical	1	2893	junction_10	58692.460693194844	NA	1	NA	TRUE	NA	NA	NA	B	coding	342	1029	468	1496	10.0	-3899	False	NA	NA
PB.9538.3	chr5	+	2171	12	novel_not_in_catalog	ARHGAP26	novel	9395	23	NA	NA	11470	-18	any annotated donor/acceptor	FALSE	canonical	1	5355	junction_1	44249.424234569524	NA	1	NA	TRUE	NA	NA	NA	B	coding	332	999	443	1441	75.0	-13	True	NA	NA
PB.3297.1	chr14	-	2840	5	full-splice_match	ZNF219	ENST00000451119.6	2918	5	84	-6	84	6	multi-exon	FALSE	canonical	1	4924	junction_4	103108.15711426521	NA	1	NA	TRUE	NA	NA	NA	C	coding	681	2046	335	2380	5.0	-423	False	AATAAA	-22
PB.3297.2	chr14	-	2769	5	full-splice_match	ZNF219	ENST00000360947.7	3071	5	271	31	271	5	multi-exon	FALSE	canonical	1	43336	junction_4	87645.53734503542	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	265	2310	5.0	5846	False	AATAAA	-21
PB.3297.3	chr14	-	3265	5	novel_in_catalog	ZNF219	novel	3071	5	NA	NA	-80	2	combination_of_known_junctions	FALSE	canonical	1	8197	junction_4	101776.24000319278	NA	2	NA	TRUE	NA	NA	NA	C	coding	681	2046	764	2809	5.0	556	False	AATAAA	-18
PB.9538.8	chr5	+	2795	8	novel_not_in_catalog	ARHGAP26	novel	9395	23	NA	NA	937	8	any annotated donor/acceptor	FALSE	canonical	1	3646	junction_1	44260.3461397238	NA	1	NA	TRUE	NA	NA	NA	B	coding	257	774	310	1083	30.0	-3	True	GATAAA	-29
PB.637.1	chr1	+	1867	8	full-splice_match	VANGL1	ENST00000355485.6	8691	8	3	6821	3	-451	multi-exon	FALSE	canonical	1	46602	junction_1	38560.48695549498	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	269	1843	85.0	-14	True	TTTAAA	-24
PB.786.3	chr1	-	3625	2	incomplete-splice_match	PYGO2	ENST00000368457.2	3146	3	-33	1	-33	-1	intron_retention	FALSE	canonical	1	304324	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	764	1873	25.0	0	True	AATAAA	-17
PB.786.2	chr1	-	4755	1	genic	PYGO2	novel	NA	NA	NA	NA	-33	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	339	1020	1984	3003	25.0	0	True	AATAAA	-17
PB.786.1	chr1	-	3038	3	full-splice_match	PYGO2	ENST00000368457.2	3146	3	106	2	106	-2	multi-exon	FALSE	canonical	1	251228	junction_2	26548.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	67	1287	25.0	9446	False	AATAAA	-16
PB.11722.27	chr9	-	3450	14	full-splice_match	PTBP3	ENST00000374257.5	7240	14	-2	3792	-2	18	multi-exon	FALSE	canonical	1	259769	junction_12	122928.3672971026	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	252	1826	30.0	-51	False	AAGAAA	-19
PB.10704.15	chr7	+	4746	5	full-splice_match	ZKSCAN5	ENST00000454175.1	5626	5	2	878	2	0	multi-exon	FALSE	canonical	1	26272	junction_3	29579.82890733988	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	1566	3173	15.0	-4	True	NA	NA
PB.607.7	chr1	+	1507	8	full-splice_match	CD53	ENST00000271324.5	1505	8	-4	2	-4	-2	multi-exon	FALSE	canonical	1	1074847	junction_5	205189.5261392874	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	117	776	45.0	2	True	AATAAA	-24
PB.607.6	chr1	+	6570	5	novel_in_catalog	CD53	novel	1569	9	NA	NA	26	-2	intron_retention	FALSE	canonical	1	179348	junction_1	608572.1659262667	NA	6	1	TRUE	NA	NA	NA	C	coding	100	303	157	459	45.0	4	True	AATAAA	-24
PB.607.5	chr1	+	2374	9	full-splice_match	CD53	ENST00000648608.1	1569	9	23	-828	23	822	multi-exon	FALSE	canonical	1	179348	junction_1	462889.0465375956	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	160	819	95.0	1	True	NA	NA
PB.607.4	chr1	+	3705	7	novel_in_catalog	CD53	novel	1569	9	NA	NA	23	-2	intron_retention	FALSE	canonical	1	179348	junction_1	513534.3512532914	NA	2	NA	TRUE	NA	NA	NA	C	coding	119	360	160	519	45.0	1	True	AATAAA	-24
PB.607.3	chr1	+	2092	9	novel_not_in_catalog	CD53	novel	1569	9	NA	NA	14	2	any annotated donor/acceptor	FALSE	canonical	1	2691	junction_3	598963.8282029225	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	707	1363	45.0	-8	True	AATAAA	-22
PB.10486.2	chr7	-	4199	7	full-splice_match	KIAA0895	ENST00000436884.5	1952	7	27	-2274	-1	-1	multi-exon	FALSE	canonical	1	9955	junction_6	20290.122345751282	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	408	1661	25.0	-42	True	AATAAA	-25
PB.607.1	chr1	+	1488	8	novel_not_in_catalog	CD53	novel	1569	9	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	706055.2224616625	NA	7	1	TRUE	NA	NA	NA	C	coding	192	579	186	764	40.0	-22	True	AATAAA	-17
PB.607.9	chr1	+	2544	7	novel_in_catalog	CD53	novel	1569	9	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1074847	junction_5	213243.88670799765	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	85	702	45.0	6	True	AATAAA	-18
PB.1643.18	chr10	-	2417	20	novel_in_catalog	XPNPEP1	novel	4384	17	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	1	11327	junction_17	170481.14855394265	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	412	2001	5.0	-42	True	AATAAA	-14
PB.5508.9	chr18	-	3452	2	novel_not_in_catalog	BCL2	novel	7461	2	NA	NA	23212	1332	any annotated donor/acceptor	FALSE	canonical	1	4455	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	115	348	3	350	5.0	-245	False	TATAAA	-14
PB.5508.8	chr18	-	4831	3	full-splice_match	BCL2	ENST00000333681.4	3209	3	-289	-1333	53	1333	multi-exon	FALSE	canonical	1	122770	junction_2	5243.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	239	720	1189	1908	5.0	-21	True	TATAAA	-15
PB.11145.4	chr8	+	3606	9	full-splice_match	SDCBP	ENST00000260130.8	2167	9	81	-1520	-4	1520	multi-exon	FALSE	canonical	1	278688	junction_5	325460.43059849745	NA	2	NA	TRUE	NA	NA	NA	C	coding	298	897	70	966	40.0	-11	True	AATAAA	-33
PB.10154.4	chr6	+	2781	21	novel_in_catalog	FIG4	novel	3011	23	NA	NA	2	-5	no_combination_of_known_junctions	FALSE	canonical	1	515	junction_1	46984.80337436244	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	245	2623	10.0	2	True	AATAAA	-11
PB.1683.19	chr10	-	1882	11	incomplete-splice_match	MCMBP	ENST00000369077.3	2465	16	-39	9310	-39	2275	3prime_fragment	FALSE	canonical	1	253062	junction_10	145241.83700449398	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	305	1555	30.0	-46	True	AATAAA	-20
PB.1683.18	chr10	-	1943	13	incomplete-splice_match	MCMBP	ENST00000369077.3	2465	16	-36	5599	-36	-5595	3prime_fragment	FALSE	canonical	1	253062	junction_12	154295.9581235037	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	302	1849	95.0	-43	True	NA	NA
PB.10154.1	chr6	+	2767	20	incomplete-splice_match	FIG4	ENST00000230124.7	3011	23	-67	33657	-67	200	3prime_fragment	TRUE	canonical	1	109095	junction_1	23890.468141544665	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	192	2642	25.0	-67	False	AATAAA	-19
PB.8277.8	chr3	+	6091	11	incomplete-splice_match	NFKBIZ	ENST00000394054.6	3787	13	21521	-1	0	1	5prime_fragment	FALSE	canonical	1	285237	junction_8	59107.42782502044	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	2583	4439	20.0	0	True	AATAAA	-16
PB.8277.7	chr3	+	3700	12	full-splice_match	NFKBIZ	ENST00000326172.9	3923	12	0	223	0	-223	multi-exon	FALSE	canonical	1	108609	junction_1	100738.41896181229	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	116	2272	95.0	0	True	AATAAA	-29
PB.1683.14	chr10	-	4688	15	novel_in_catalog	MCMBP	novel	4169	16	NA	NA	-72	3	intron_retention	FALSE	canonical	1	253062	junction_14	180307.3069810969	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	338	1594	15.0	647	False	ATTAAA	-20
PB.1683.17	chr10	-	2329	16	novel_in_catalog	MCMBP	novel	4169	16	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	2353	junction_15	201567.92259301138	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	342	2054	25.0	-51	False	ATTAAA	-15
PB.1683.16	chr10	-	2461	16	full-splice_match	MCMBP	ENST00000369077.3	2465	16	-34	38	-34	-34	multi-exon	FALSE	canonical	1	253062	junction_15	153529.08455953514	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	300	2222	55.0	-41	True	TATAAA	-14
PB.1683.11	chr10	-	2825	16	full-splice_match	MCMBP	ENST00000369077.3	2465	16	-38	-322	-38	322	multi-exon	FALSE	canonical	1	253062	junction_15	153529.08455953514	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	304	2226	15.0	-45	True	ACTAAA	-13
PB.1683.10	chr10	-	3595	16	full-splice_match	MCMBP	ENST00000369077.3	2465	16	-38	-1092	-38	-701	multi-exon	FALSE	canonical	1	253062	junction_15	153529.08455953514	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	304	2226	35.0	-45	True	AGTAAA	-22
PB.1683.13	chr10	-	2343	15	novel_in_catalog	MCMBP	novel	4169	16	NA	NA	-39	4	no_combination_of_known_junctions	FALSE	canonical	1	35573	junction_2	212837.27891024723	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	305	2062	15.0	-46	True	ATTAAA	-21
PB.5508.6	chr18	-	5776	2	novel_not_in_catalog	BCL2	novel	7461	2	NA	NA	23241	-4	any annotated donor/acceptor	FALSE	canonical	1	4455	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	1	321	15.0	-216	False	AATAAA	-15
PB.7340.9	chr20	+	2591	18	novel_not_in_catalog	ARFGEF2	novel	8852	39	NA	NA	-173	-9896	any annotated donor/acceptor	FALSE	canonical	1	54443	junction_7	52846.724489147244	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2418	174	2591	45.0	-11	True	ATTAAA	-25
PB.10486.1	chr7	-	4424	7	full-splice_match	KIAA0895	ENST00000440378.5	2441	7	-71	-1912	-3	-1	multi-exon	FALSE	canonical	1	13033	junction_6	19584.580741122736	NA	3	NA	TRUE	NA	NA	NA	C	coding	517	1554	333	1886	25.0	-72	False	AATAAA	-25
PB.7340.8	chr20	+	5726	37	novel_in_catalog	ARFGEF2	novel	8852	39	NA	NA	-179	-3065	no_combination_of_known_junctions	FALSE	canonical	1	2293	junction_10	64337.903971464264	NA	0	NA	TRUE	NA	NA	NA	C	coding	1705	5118	180	5297	25.0	-17	True	AATAAA	-28
PB.231.4	chr1	+	1976	4	novel_not_in_catalog	YTHDF2	novel	864	5	NA	NA	299	-4	any annotated donor/acceptor	FALSE	canonical	1	607	junction_1	265077.38752086886	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	218	1807	85.0	-43	False	NA	NA
PB.11877.5	chr9	-	1841	5	full-splice_match	SURF6	ENST00000372022.5	4447	5	192	2414	192	618	multi-exon	FALSE	canonical	1	320420	junction_2	27116.108914951274	NA	3	NA	TRUE	NA	NA	NA	C	coding	361	1086	75	1160	75.0	-19	True	NA	NA
PB.11051.2	chr8	+	2104	19	full-splice_match	EPHX2	ENST00000521400.5	3140	19	392	644	5	1	multi-exon	FALSE	canonical	1	126333	junction_1	42377.1956042864	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	39	1706	0.0	-26	True	AATAAA	-17
PB.1681.17	chr10	+	2971	15	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	0	-10902	combination_of_known_junctions	FALSE	canonical	1	2213	junction_14	40311.91875151283	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	179	901	80.0	0	True	AATATA	-6
PB.1681.16	chr10	+	4363	19	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	0	14	no_combination_of_known_junctions	FALSE	canonical	1	1826	junction_12	79020.91179695551	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	179	3448	70.0	0	True	NA	NA
PB.1681.15	chr10	+	4816	19	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	6253	junction_3	78503.09845068553	NA	0	NA	TRUE	NA	NA	NA	C	coding	1089	3270	179	3448	35.0	0	True	AATAAA	-24
PB.1681.14	chr10	+	4984	20	novel_not_in_catalog	INPP5F	novel	5007	21	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	350	junction_18	69238.44183080592	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	182	2455	45.0	-3	True	AATAAA	-16
PB.1681.13	chr10	+	5084	21	novel_not_in_catalog	INPP5F	novel	5007	21	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	78918.43960854459	NA	2	1	TRUE	NA	NA	NA	C	coding	1036	3111	608	3718	40.0	-3	True	AATAAA	-22
PB.1681.12	chr10	+	3763	16	novel_not_in_catalog	INPP5F	novel	5007	21	NA	NA	0	-3909	intron_retention	FALSE	canonical	1	3219	junction_15	32656.88654248731	NA	5	NA	TRUE	NA	NA	NA	C	coding	641	1926	182	2107	15.0	-3	True	AATAAA	-16
PB.1681.11	chr10	+	4358	19	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	0	14	no_combination_of_known_junctions	FALSE	canonical	1	2394	junction_2	78581.64429141967	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	549	3443	70.0	-3	True	NA	NA
PB.1681.10	chr10	+	4891	19	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1460	junction_5	76734.78032529309	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3342	182	3523	35.0	-3	True	AATAAA	-24
PB.9920.6	chr6	+	3473	4	novel_in_catalog	RPS18	novel	613	6	NA	NA	587	-1	intron_retention	FALSE	canonical	1	8417	junction_3	8204892.926808422	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-4664	False	AATAAA	-13
PB.9920.5	chr6	+	2722	2	novel_not_in_catalog	RPS18	novel	613	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	62	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	coding	106	321	155	475	5.0	0	True	AATAAA	-14
PB.9920.4	chr6	+	3691	4	novel_in_catalog	RPS18	novel	613	6	NA	NA	2	-1	intron_retention	FALSE	canonical	1	8417	junction_3	3277366.940729741	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-13
PB.9920.3	chr6	+	4198	3	full-splice_match	RPS18	ENST00000479802.1	413	3	-3789	4	2	1	multi-exon	FALSE	canonical	1	8417	junction_2	2670821.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	106	321	155	475	5.0	0	True	AATAAA	-15
PB.9920.2	chr6	+	542	6	full-splice_match	RPS18	ENST00000439602.6	613	6	67	4	2	1	multi-exon	TRUE	canonical	1	8417	junction_5	6364460.657427449	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	44	502	5.0	0	True	AATAAA	-15
PB.1681.19	chr10	+	2658	20	full-splice_match	INPP5F	ENST00000650623.1	4944	20	0	2286	0	90	multi-exon	FALSE	canonical	1	56675	junction_1	70901.86298635804	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2478	179	2656	40.0	0	True	AGTAAA	-13
PB.1681.18	chr10	+	2855	18	incomplete-splice_match	INPP5F	ENST00000649251.1	4421	19	31	4966	0	-104	3prime_fragment	FALSE	canonical	1	56675	junction_1	57073.01620934217	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	179	2359	35.0	0	True	AATAAA	-15
PB.7340.1	chr20	+	9037	39	full-splice_match	ARFGEF2	ENST00000371917.4	8852	39	-186	1	-186	-1	multi-exon	FALSE	canonical	1	114682	junction_1	51313.882148116645	NA	2	NA	TRUE	NA	NA	NA	C	coding	1785	5358	187	5544	25.0	-24	True	AATAAA	-13
PB.11319.2	chr8	-	2115	1	incomplete-splice_match	SNTB1	ENST00000395601.7	5164	8	274372	1042	155007	-940	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	ATTAAA	-15
PB.231.5	chr1	+	1830	3	incomplete-splice_match	YTHDF2	ENST00000478283.5	2594	4	1336	4	536	-4	5prime_fragment	FALSE	canonical	1	199036	junction_2	218099.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	72	1661	85.0	194	False	NA	NA
PB.12228.9	chrX	+	3277	16	full-splice_match	PLS3	ENST00000355899.7	3280	16	-1	4	-1	0	multi-exon	FALSE	canonical	1	906112	junction_1	214232.97845040882	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	98	1981	30.0	-15	True	AGTAAA	-21
PB.12228.8	chrX	+	2380	1	novel_in_catalog	PLS3	novel	926	6	NA	NA	0	-50655	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-22	True	TTTAAA	-16
PB.12228.7	chrX	+	2627	16	full-splice_match	PLS3	ENST00000355899.7	3280	16	-8	661	0	144	multi-exon	FALSE	canonical	1	906112	junction_1	214232.97845040882	NA	2	NA	TRUE	NA	NA	NA	C	coding	627	1884	105	1988	15.0	-22	True	ATTAAA	-18
PB.12228.6	chrX	+	3479	17	novel_in_catalog	PLS3	novel	926	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1816	junction_2	509621.6148061433	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	613	2370	20.0	-22	True	AATAAA	-15
PB.12228.5	chrX	+	2928	16	full-splice_match	PLS3	ENST00000355899.7	3280	16	-8	360	0	-171	multi-exon	FALSE	canonical	1	906112	junction_1	214232.97845040882	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	105	1988	50.0	-22	True	AATATA	-20
PB.12228.4	chrX	+	3176	17	novel_not_in_catalog	PLS3	novel	926	6	NA	NA	-11	-5	any annotated donor/acceptor	FALSE	canonical	1	745	junction_1	503965.08740125975	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	187	2070	30.0	-33	True	AATAAA	-12
PB.12228.3	chrX	+	2808	16	full-splice_match	PLS3	ENST00000355899.7	3280	16	-33	505	-25	300	multi-exon	FALSE	canonical	1	906112	junction_1	214232.97845040882	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	130	2013	45.0	-6582	False	AATACA	-15
PB.12228.2	chrX	+	3074	16	full-splice_match	PLS3	ENST00000355899.7	3280	16	13	193	13	-4	multi-exon	FALSE	canonical	1	906112	junction_1	214232.97845040882	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	84	1967	25.0	-1	True	AATAAA	-13
PB.12228.1	chrX	+	3270	17	novel_not_in_catalog	PLS3	novel	926	6	NA	NA	-57	-4	any annotated donor/acceptor	TRUE	canonical	1	1628	junction_2	504188.3734076822	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	280	2163	25.0	-6614	False	AATAAA	-13
PB.10055.4	chr6	+	2351	11	full-splice_match	SMAP1	ENST00000370455.7	3333	11	139	843	139	6	multi-exon	FALSE	canonical	1	49733	junction_5	140021.35565552136	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	110	1513	10.0	-3	True	ATTAAA	-20
PB.2010.18	chr11	+	1639	9	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	7569	junction_1	1628111.765156246	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	947	1474	10.0	0	True	AATAAA	-19
PB.2553.1	chr12	+	1226	10	full-splice_match	PPHLN1	ENST00000358314.11	1643	10	-12	429	0	-17	multi-exon	FALSE	canonical	1	357767	junction_2	169275.79873583323	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	106	1209	80.0	-5654	False	NA	NA
PB.2553.2	chr12	+	3577	13	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	43781	junction_11	259227.95797532247	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	106	1575	15.0	-5654	False	AATAAA	-17
PB.2553.3	chr12	+	3411	12	full-splice_match	PPHLN1	ENST00000432191.6	3377	12	-33	-1	0	1	multi-exon	FALSE	canonical	1	43781	junction_10	266073.6055883661	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	106	1410	15.0	-5654	False	AATAAA	-16
PB.2553.4	chr12	+	3549	13	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	43921	junction_11	259208.346738359	NA	2	NA	TRUE	NA	NA	NA	C	coding	483	1452	94	1545	10.0	-11	True	AATAAA	-19
PB.2553.5	chr12	+	1478	9	incomplete-splice_match	PPHLN1	ENST00000337898.10	1465	11	15	3488	2	3	3prime_fragment	FALSE	canonical	1	435039	junction_2	141888.27259744724	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	91	1029	30.0	-8	True	AATAAA	-23
PB.2553.6	chr12	+	3381	12	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	43921	junction_10	266051.9561090861	NA	1	NA	TRUE	NA	NA	NA	C	coding	428	1287	91	1377	10.0	-8	True	AATAAA	-19
PB.2553.7	chr12	+	1517	10	full-splice_match	PPHLN1	ENST00000552761.5	1095	10	-10	-412	-2	0	multi-exon	FALSE	canonical	1	160942	junction_1	239728.2176317358	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	112	1071	35.0	-7	True	AATAAA	-20
PB.2553.8	chr12	+	3602	14	novel_in_catalog	PPHLN1	novel	1777	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	43781	junction_12	269951.7567479671	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	111	1601	15.0	-6	True	AATAAA	-16
PB.2553.9	chr12	+	3466	13	full-splice_match	PPHLN1	ENST00000395568.6	2170	13	-4	-1292	-1	1	multi-exon	FALSE	canonical	1	266	junction_11	265526.68922961975	NA	12	1	TRUE	NA	NA	NA	C	coding	458	1377	89	1465	15.0	-6	True	AATAAA	-16
PB.2010.12	chr11	+	2007	10	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	17521	junction_3	1527599.833763128	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	129	854	10.0	0	True	AATAAA	-19
PB.2010.13	chr11	+	2013	10	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	2	0	intron_retention	FALSE	canonical	1	5940	junction_7	1550735.0213899007	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	127	1353	10.0	2	True	AATAAA	-19
PB.2010.14	chr11	+	1893	9	novel_not_in_catalog	SLC3A2	novel	2161	12	NA	NA	2	0	intron_retention	FALSE	canonical	1	7234	junction_1	1277624.851597921	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	127	1728	10.0	2	True	AATAAA	-19
PB.2010.15	chr11	+	4186	7	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	9	-3	intron_retention	FALSE	canonical	1	2084424	junction_1	816514.8518658773	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	3480	4007	25.0	9	True	AATAAA	-33
PB.2010.16	chr11	+	1405	8	full-splice_match	SLC3A2	ENST00000536981.5	1486	8	112	-31	32	1	multi-exon	FALSE	canonical	1	2602491	junction_6	588752.4070323689	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	695	1222	25.0	-6582	False	AATAAA	-37
PB.2010.17	chr11	+	1663	9	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	0	-3	intron_retention	FALSE	canonical	1	17521	junction_2	1609439.129542722	NA	2	NA	TRUE	NA	NA	NA	C	coding	175	528	957	1484	25.0	0	True	AATAAA	-33
PB.3373.22	chr14	+	7076	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	16	2512	-4	0	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	303	4808	30.0	1	True	ATTAAA	-17
PB.3373.23	chr14	+	3851	2	incomplete-splice_match	ARHGAP5	ENST00000345122.7	9604	7	16	65507	-4	3132	3prime_fragment	FALSE	canonical	1	47137	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1183	3549	303	3851	75.0	1	True	NA	NA
PB.3373.20	chr14	+	3443	6	novel_in_catalog	ARHGAP5	novel	583	3	NA	NA	-6	250	intron_retention	FALSE	canonical	1	6042	junction_1	78217.34865769869	NA	1	1	TRUE	NA	NA	NA	C	coding	241	726	200	925	15.0	-1	True	AATAAA	-16
PB.3373.21	chr14	+	5876	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	15	3713	-5	877	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	304	4809	20.0	0	True	AATAAA	-19
PB.3373.26	chr14	+	3974	6	full-splice_match	ARHGAP5	ENST00000433497.5	3047	6	-2	-925	-2	788	multi-exon	FALSE	canonical	1	3420	junction_1	78997.7981576702	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	193	918	20.0	3	True	TATAAA	-24
PB.3373.27	chr14	+	6633	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	19	2952	-1	-303	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	300	4805	30.0	4	True	ATTAAA	-22
PB.3373.24	chr14	+	3043	5	full-splice_match	ARHGAP5	ENST00000396582.6	5786	5	231	2512	-4	0	multi-exon	FALSE	canonical	1	2372	junction_1	88477.44860238399	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	62	775	30.0	1	True	ATTAAA	-17
PB.3373.25	chr14	+	7322	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	18	2264	-2	248	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	301	4806	20.0	3	True	AATAAA	-14
PB.6471.9	chr2	-	1855	12	incomplete-splice_match	MTIF2	ENST00000263629.8	2528	16	-25	6846	-25	-3455	3prime_fragment	FALSE	canonical	1	164400	junction_5	76936.90770048142	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1512	342	1853	65.0	71	False	AAGAAA	-22
PB.3373.28	chr14	+	6912	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	22	2670	2	-21	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	0	NA	TRUE	NA	NA	NA	C	coding	1501	4506	297	4802	20.0	7	True	ATTAAA	-25
PB.3373.29	chr14	+	6231	7	full-splice_match	ARHGAP5	ENST00000345122.7	9604	7	22	3351	2	-702	multi-exon	FALSE	canonical	1	47137	junction_1	64038.12509942808	NA	1	NA	TRUE	NA	NA	NA	C	coding	1501	4506	297	4802	20.0	7	True	AGTAAA	-26
PB.853.1	chr1	+	5351	8	full-splice_match	VANGL2	ENST00000368061.2	5340	8	-15	4	-15	-4	multi-exon	FALSE	canonical	1	44864	junction_1	21703.574123039867	NA	1	NA	TRUE	NA	NA	NA	A	coding	521	1566	490	2055	5.0	3	True	AATAAA	-20
PB.8578.13	chr3	-	2988	16	full-splice_match	IGF2BP2	ENST00000382199.6	3688	16	15	685	15	-449	multi-exon	FALSE	canonical	1	37161	junction_1	59829.25970556175	NA	1	NA	TRUE	NA	NA	NA	C	coding	599	1800	82	1881	65.0	-1	True	AAAACA	-28
PB.999.10	chr1	+	2072	15	novel_not_in_catalog	ODR4	novel	1900	13	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	88467.68913483126	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	150	1340	65.0	-2	True	NA	NA
PB.7047.16	chr2	+	3259	1	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	3	-264	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	117	354	3	356	15.0	31	True	ATTAAA	-24
PB.3505.3	chr14	+	3046	13	novel_not_in_catalog	FUT8	novel	5166	11	NA	NA	-74220	-26	any annotated donor/acceptor	FALSE	canonical	1	537	junction_1	143498.9968190593	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	613	2340	70.0	1	True	NA	NA
PB.9636.6	chr5	-	3825	11	novel_not_in_catalog	RNF44	novel	4155	11	NA	NA	-16	-17	any annotated donor/acceptor	FALSE	canonical	1	12655	junction_7	170862.0823719821	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	597	1511	20.0	3	True	AATAAA	-16
PB.2543.3	chr12	-	3384	16	novel_in_catalog	KIF21A	novel	3535	7	NA	NA	-556	-3	combination_of_known_junctions	FALSE	canonical	1	65959	junction_7	54936.982015962814	NA	8	NA	TRUE	NA	NA	NA	B	coding	726	2181	14	2194	30.0	8579	False	AATAAA	-13
PB.2543.2	chr12	-	3473	17	incomplete-splice_match	KIF21A	ENST00000544797.6	5040	34	110135	-1153	-516	-3	5prime_fragment	TRUE	canonical	1	46495	junction_7	61010.52878896703	NA	8	1	TRUE	NA	NA	NA	B	coding	730	2193	91	2283	30.0	8619	False	AATAAA	-13
PB.7588.2	chr22	+	3009	4	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-164	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-26
PB.11641.14	chr9	-	4326	17	novel_not_in_catalog	SEMA4D	novel	4258	19	NA	NA	-7838	0	any annotated donor/acceptor	FALSE	canonical	1	389	junction_16	97274.37451024486	NA	5	1	TRUE	NA	NA	NA	C	coding	860	2583	431	3013	15.0	9911	False	AATAAA	-16
PB.8073.1	chr3	-	852	7	incomplete-splice_match	CCDC12	ENST00000425441.5	1097	9	5225	5	0	0	5prime_fragment	FALSE	canonical	1	740876	junction_4	93158.67836236312	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	26	526	35.0	-13	True	AGTAAA	-15
PB.8073.2	chr3	-	2640	2	full-splice_match	CCDC12	ENST00000460035.1	572	2	0	-2068	0	2068	multi-exon	FALSE	canonical	1	923485	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	155	468	696	1163	90.0	-13	True	NA	NA
PB.772.2	chr1	+	1775	10	novel_in_catalog	CREB3L4	novel	568	3	NA	NA	-53	1	combination_of_known_junctions	FALSE	canonical	1	24511	junction_1	128943.60747930771	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	351	1478	40.0	-9904	False	AATAAA	-18
PB.4200.11	chr16	-	2214	6	novel_in_catalog	ZNF200	novel	3082	5	NA	NA	-2	67	combination_of_known_junctions	FALSE	canonical	1	670	junction_5	58126.78696229476	NA	1	1	TRUE	NA	NA	NA	C	coding	394	1185	407	1591	45.0	-848	False	NA	NA
PB.4200.10	chr16	-	2076	5	full-splice_match	ZNF200	ENST00000414144.6	3306	5	287	943	-2	68	multi-exon	FALSE	canonical	1	35730	junction_4	42022.34697976185	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	268	1452	40.0	-12	True	NA	NA
PB.11641.11	chr9	-	4403	16	full-splice_match	SEMA4D	ENST00000422704.6	4382	16	-21	0	20	0	multi-exon	FALSE	canonical	1	43754	junction_15	93714.91221747416	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	508	3090	15.0	-22	True	AATAAA	-16
PB.11641.10	chr9	-	3119	7	novel_not_in_catalog	SEMA4D	novel	4258	19	NA	NA	11	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	119006.74676217591	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	262	1653	25.0	-31	True	AATAAA	-18
PB.1090.11	chr1	+	3216	13	full-splice_match	CD46	ENST00000367042.5	3326	13	107	3	41	-3	multi-exon	FALSE	canonical	1	520171	junction_12	387876.14363618236	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	50	1183	20.0	0	True	AATAAA	-21
PB.5648.10	chr19	-	1988	6	novel_in_catalog	KHSRP	novel	2993	20	NA	NA	198	123	intron_retention	FALSE	canonical	1	73303	junction_2	557217.472112424	NA	1	NA	TRUE	NA	NA	NA	B	coding	208	627	180	806	80.0	8196	False	NA	NA
PB.11641.13	chr9	-	4390	15	novel_in_catalog	SEMA4D	novel	4258	19	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	1	17139	junction_14	83165.42080414559	NA	2	NA	TRUE	NA	NA	NA	C	coding	860	2583	495	3077	15.0	-19	False	AATAAA	-16
PB.11641.12	chr9	-	4445	17	novel_in_catalog	SEMA4D	novel	4258	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	43754	junction_16	90157.3180109834	NA	2	NA	TRUE	NA	NA	NA	C	coding	860	2583	550	3132	15.0	-1	True	AATAAA	-16
PB.8493.30	chr3	+	2041	15	novel_in_catalog	MFSD1	novel	566	5	NA	NA	-6	-1	no_combination_of_known_junctions	FALSE	canonical	1	17267	junction_10	220871.6786693332	NA	5	NA	TRUE	NA	NA	NA	C	coding	327	984	69	1052	15.0	-52	True	ATTAAA	-13
PB.772.3	chr1	+	1772	10	full-splice_match	CREB3L4	ENST00000368607.7	1752	10	-21	1	-10	1	multi-exon	FALSE	canonical	1	64552	junction_1	102921.36383175096	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	288	1475	40.0	-20	True	AATAAA	-18
PB.3580.7	chr14	+	2964	5	incomplete-splice_match	GPATCH2L	ENST00000554125.5	6248	6	-17	4502	1	1485	3prime_fragment	FALSE	canonical	1	137170	junction_1	51094.295897389566	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	86	1141	35.0	-5	True	AATAAA	-19
PB.3580.6	chr14	+	3938	5	incomplete-splice_match	GPATCH2L	ENST00000554125.5	6248	6	-17	3528	1	2459	3prime_fragment	FALSE	canonical	1	137170	junction_1	51094.295897389566	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	86	1141	35.0	-5	True	AATAAA	-27
PB.3580.5	chr14	+	3931	10	novel_not_in_catalog	GPATCH2L	novel	1791	11	NA	NA	-5	-2479	intron_retention	FALSE	canonical	1	2008	junction_9	79336.65379854773	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	92	1420	25.0	-11	True	NA	NA
PB.3580.4	chr14	+	2483	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-29	11553	-9	2	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	96	1544	15.0	-15	True	AGTAAA	-24
PB.3580.3	chr14	+	3762	9	incomplete-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-33	15996	-13	1762	3prime_fragment	FALSE	canonical	1	137170	junction_1	39139.15240443385	NA	2	NA	TRUE	NA	NA	NA	C	coding	446	1341	100	1440	70.0	-19	True	AAGAAA	-9
PB.3580.2	chr14	+	4945	9	incomplete-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-35	14815	-15	-2479	3prime_fragment	FALSE	canonical	1	137170	junction_1	39139.15240443385	NA	3	NA	TRUE	NA	NA	NA	C	coding	446	1341	102	1442	25.0	-21	True	NA	NA
PB.3580.1	chr14	+	3732	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-39	10314	-19	1241	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	106	1554	45.0	-648	False	ATTAAA	-17
PB.8260.50	chr3	-	3016	4	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	36	8553	any annotated donor/acceptor	FALSE	canonical	1	921	junction_1	253314.51831709573	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	328	981	45.0	353	False	ATTAAA	-9
PB.231.1	chr1	+	1981	5	full-splice_match	YTHDF2	ENST00000373812.7	2925	5	290	654	84	-4	multi-exon	FALSE	canonical	1	199036	junction_4	188234.26780394558	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	73	1812	85.0	0	True	NA	NA
PB.3580.9	chr14	+	7201	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-14	6820	0	4735	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	3	NA	TRUE	NA	NA	NA	C	coding	482	1449	81	1529	75.0	0	True	TTTAAA	-12
PB.3580.8	chr14	+	1964	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-19	12062	1	274	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	9	1	TRUE	NA	NA	NA	C	coding	482	1449	86	1534	25.0	-5	True	TTTAAA	-9
PB.8416.2	chr3	+	3318	13	full-splice_match	PPP2R3A	ENST00000490467.5	1782	13	-59	-1477	12	-1030	multi-exon	FALSE	canonical	1	2641	junction_1	27384.063981427025	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	379	1623	90.0	-535	False	AAGAAA	-24
PB.8416.3	chr3	+	5735	14	full-splice_match	PPP2R3A	ENST00000264977.7	6795	14	30	1030	30	-1030	multi-exon	FALSE	canonical	1	28615	junction_1	20590.120935872284	NA	1	NA	TRUE	NA	NA	NA	C	coding	1150	3453	588	4040	90.0	-517	False	AAGAAA	-24
PB.6158.1	chr19	-	1345	9	full-splice_match	NAPSB	ENST00000527780.5	1343	9	-5	3	0	-3	multi-exon	FALSE	canonical	1	193276	junction_8	54066.16151863728	NA	0	NA	TRUE	NA	NA	NA	A	coding	444	1332	12	1343	25.0	0	True	AGTAAA	-18
PB.8416.1	chr3	+	4548	14	full-splice_match	PPP2R3A	ENST00000264977.7	6795	14	12	2235	12	219	multi-exon	FALSE	canonical	1	28615	junction_1	20590.120935872284	NA	0	NA	TRUE	NA	NA	NA	C	coding	1150	3453	606	4058	25.0	-535	False	AATAAA	-18
PB.357.5	chr1	+	3878	20	full-splice_match	IPO13	ENST00000372343.7	3894	20	15	1	15	-1	multi-exon	FALSE	canonical	1	150030	junction_1	92689.30195424143	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	648	3539	30.0	-12	True	ATTAAA	-16
PB.3613.1	chr14	+	1542	6	full-splice_match	CALM1	ENST00000356978.8	4242	6	46	2654	0	0	multi-exon	FALSE	canonical	1	2498904	junction_2	1929057.7436254625	NA	1	NA	TRUE	NA	NA	NA	C	coding	149	450	203	652	30.0	0	True	AATAAA	-15
PB.3613.2	chr14	+	4201	6	full-splice_match	CALM1	ENST00000356978.8	4242	6	46	-5	0	5	multi-exon	FALSE	canonical	1	2498904	junction_2	1929057.7436254625	NA	2	NA	TRUE	NA	NA	NA	C	coding	149	450	203	652	25.0	0	True	AATAAA	-24
PB.3613.3	chr14	+	1824	6	full-splice_match	CALM1	ENST00000356978.8	4242	6	47	2371	1	283	multi-exon	FALSE	canonical	1	2498904	junction_2	1929057.7436254625	NA	2	NA	TRUE	NA	NA	NA	C	coding	149	450	202	651	60.0	1	True	NA	NA
PB.3613.4	chr14	+	1460	6	full-splice_match	CALM1	ENST00000553542.5	877	6	-25	-558	-1	-1	multi-exon	FALSE	canonical	1	14110	junction_1	2666519.9509389014	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	230	571	30.0	2	True	AATAAA	-14
PB.3613.5	chr14	+	717	6	full-splice_match	CALM1	ENST00000356978.8	4242	6	49	3476	0	0	multi-exon	FALSE	canonical	1	2498904	junction_2	1929057.7436254625	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	200	649	90.0	3	True	NA	NA
PB.357.3	chr1	+	3942	18	novel_in_catalog	IPO13	novel	3894	20	NA	NA	-17	-3	intron_retention	FALSE	canonical	1	150030	junction_1	94825.58281202462	NA	12	1	TRUE	NA	NA	NA	C	coding	424	1275	680	1954	5.0	-44	True	AGTAAA	-9
PB.357.2	chr1	+	3853	21	novel_not_in_catalog	IPO13	novel	3894	20	NA	NA	-20	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_20	116437.83155035996	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	683	3574	30.0	-47	True	ATTAAA	-16
PB.231.2	chr1	+	2598	4	full-splice_match	YTHDF2	ENST00000478283.5	2594	4	-8	4	2	-4	multi-exon	FALSE	canonical	1	199036	junction_3	214674.55248403858	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	840	2429	85.0	2	True	NA	NA
PB.104.11	chr1	+	2244	4	full-splice_match	PRDM2	ENST00000505823.5	568	4	-21	-1655	0	-5	multi-exon	FALSE	canonical	1	14346	junction_2	63877.83478032284	NA	0	NA	TRUE	NA	NA	NA	C	coding	62	189	166	354	35.0	-22	True	AATAAA	-23
PB.6527.4	chr2	+	2150	13	novel_not_in_catalog	ANXA4	novel	905	4	NA	NA	-21	-642	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	416022.87122140964	NA	31	1	TRUE	NA	NA	NA	C	coding	173	522	686	1207	55.0	-53	False	ATTAAA	-13
PB.1932.15	chr11	-	3758	17	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	5271	junction_15	243382.9166326375	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	406	1947	85.0	-3	True	AATAAA	-4
PB.8988.1	chr4	+	1961	3	full-splice_match	NOCT	ENST00000280614.3	1952	3	-9	0	-9	0	multi-exon	FALSE	canonical	1	56929	junction_1	52119.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	203	1498	10.0	-1	True	ATTAAA	-30
PB.6527.7	chr2	+	1903	13	full-splice_match	ANXA4	ENST00000394295.5	2799	13	151	745	-7	572	multi-exon	FALSE	canonical	1	650196	junction_1	176153.55430860756	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	98	1063	35.0	-9	False	TATAAA	-31
PB.7450.1	chr21	+	3637	3	novel_not_in_catalog	FP236383.1	novel	2498	7	NA	NA	-21	20815	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	13	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-15
PB.9854.2	chr6	-	6204	14	novel_in_catalog	MDC1	novel	7576	15	NA	NA	-135	-1	intron_retention	FALSE	canonical	1	65540	junction_7	115757.0793293607	NA	0	NA	TRUE	NA	NA	NA	C	coding	1825	5478	70	5547	15.0	-37	True	AATAAA	-18
PB.7450.3	chr21	+	1239	4	incomplete-splice_match	FP671120.1	ENST00000623664.1	2498	7	7	3936	7	-3936	3prime_fragment	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-12
PB.7450.2	chr21	+	1689	2	incomplete-splice_match	FP236383.1	ENST00000623860.2	2498	7	-19	25500	-19	-25500	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	ATTAAA	-17
PB.7450.5	chr21	+	2341	2	novel_not_in_catalog	FP236383.1	novel	2498	7	NA	NA	8794	-16954	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.7450.4	chr21	+	2545	2	novel_not_in_catalog	FP236383.1	novel	2498	7	NA	NA	8371	-17173	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	126	381	51	431	55.0	NA	False	NA	NA
PB.7450.7	chr21	+	2306	1	novel_in_catalog	FP236383.1	novel	2498	7	NA	NA	11776	-15899	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.7450.6	chr21	+	1833	2	novel_not_in_catalog	FP236383.1	novel	2498	7	NA	NA	8794	-17462	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	NA	False	NA	NA
PB.12210.2	chrX	-	3795	17	novel_not_in_catalog	MORC4	novel	2027	2	NA	NA	27	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	57829.06131422483	NA	6	NA	TRUE	NA	NA	NA	B	coding	937	2814	249	3062	45.0	-6	True	NA	NA
PB.5695.1	chr19	-	2405	3	novel_not_in_catalog	DNMT1	novel	841	9	NA	NA	-38	-40970	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	16272.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	164	1225	0.0	6	True	AATAAA	-17
PB.5695.2	chr19	-	3594	2	full-splice_match	S1PR2	ENST00000590320.3	3584	2	-11	1	-11	-1	multi-exon	FALSE	canonical	1	32544	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	353	1062	123	1184	0.0	-1	True	AATAAA	-16
PB.12210.1	chrX	-	3807	17	novel_not_in_catalog	MORC4	novel	2027	2	NA	NA	-22	-11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	57264.02425920986	NA	3	NA	TRUE	NA	NA	NA	B	coding	900	2703	298	3000	45.0	-23	False	NA	NA
PB.231.3	chr1	+	2740	5	full-splice_match	YTHDF2	ENST00000373812.7	2925	5	185	0	4	0	multi-exon	FALSE	canonical	1	199036	junction_4	188234.26780394558	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	178	1917	25.0	4	True	AATAAA	-23
PB.4156.1	chr16	+	4253	8	novel_in_catalog	EME2	novel	1234	8	NA	NA	0	-445	intron_retention	TRUE	canonical	1	14560	junction_7	31499.20108737454	NA	0	NA	TRUE	NA	NA	NA	A	coding	245	738	606	1343	15.0	-9792	False	NA	NA
PB.9655.3	chr5	+	4074	1	novel_in_catalog	N4BP3	novel	6080	5	NA	NA	101	-8470	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	144	435	1676	2110	100.0	12	True	NA	NA
PB.92.2	chr1	+	2741	7	novel_in_catalog	FBXO44	novel	1896	5	NA	NA	7	-3	intron_retention	FALSE	canonical	1	12111	junction_6	161285.83664586162	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	120	512	30.0	-13	True	NA	NA
PB.92.3	chr1	+	2034	5	novel_in_catalog	FBXO44	novel	1896	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	175976	junction_1	105085.88794528978	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	113	505	10.0	-6	True	NA	NA
PB.12200.9	chrX	-	1905	4	full-splice_match	MORF4L2	ENST00000433176.6	1965	4	59	1	23	-1	multi-exon	FALSE	canonical	1	416439	junction_3	912040.737915558	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	379	1245	25.0	3	True	AATAAA	-22
PB.12200.8	chrX	-	1715	3	full-splice_match	MORF4L2	ENST00000451301.5	1830	3	115	0	2	0	multi-exon	FALSE	canonical	1	163214	junction_1	1215119.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	188	1054	25.0	-5	True	AATAAA	-23
PB.3603.1	chr14	+	1915	11	full-splice_match	SPATA7	ENST00000356583.9	1891	11	-24	0	0	0	multi-exon	FALSE	canonical	1	33074	junction_2	29448.942377613497	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	176	1879	20.0	-46	True	AATAAA	-23
PB.12200.5	chrX	-	1923	5	full-splice_match	MORF4L2	ENST00000434230.5	899	5	-29	-995	-3	0	multi-exon	FALSE	canonical	1	179496	junction_2	882206.399488344	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	396	1262	25.0	-21	True	AATAAA	-23
PB.12200.4	chrX	-	1913	5	full-splice_match	MORF4L2	ENST00000442614.5	869	5	10	-1054	6	0	multi-exon	FALSE	canonical	1	179496	junction_2	1046949.2755664849	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	386	1252	25.0	-1	True	AATAAA	-23
PB.12200.7	chrX	-	1813	4	full-splice_match	MORF4L2	ENST00000498064.1	451	4	117	-1479	6	0	multi-exon	FALSE	canonical	1	852005	junction_2	785213.8547055544	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	286	1152	25.0	-1	True	AATAAA	-23
PB.12200.6	chrX	-	1856	4	novel_in_catalog	MORF4L2	novel	1824	4	NA	NA	-13	0	intron_retention	FALSE	canonical	1	87025	junction_2	1144933.0876632049	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	329	1195	25.0	-24	True	AATAAA	-23
PB.12200.1	chrX	-	3201	3	full-splice_match	MORF4L2	ENST00000474653.5	573	3	-1208	-1420	-4	0	multi-exon	FALSE	canonical	1	852005	junction_2	788930.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	1670	2536	20.0	-15	True	AATAAA	-27
PB.12200.3	chrX	-	1864	4	full-splice_match	MORF4L2	ENST00000441076.6	1828	4	-31	-5	6	0	multi-exon	FALSE	canonical	1	584841	junction_2	910762.8136005311	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	337	1203	25.0	-1	True	AATAAA	-23
PB.12200.2	chrX	-	3316	5	novel_not_in_catalog	MORF4L2	novel	1824	4	NA	NA	4	0	intron_retention	FALSE	canonical	1	296	junction_2	1104131.333496694	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	1789	2655	25.0	-3	True	AATAAA	-23
PB.477.5	chr1	+	4936	1	novel_in_catalog	TYW3	novel	3335	5	NA	NA	16	-14268	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	20	True	AAAACA	-16
PB.3536.16	chr14	+	6204	23	novel_not_in_catalog	SIPA1L1	novel	521	6	NA	NA	1456	0	any annotated donor/acceptor	FALSE	canonical	1	892	junction_1	95722.16179105276	NA	3	NA	TRUE	NA	NA	NA	B	coding	1783	5352	613	5964	35.0	-2261	False	AATAAA	-13
PB.3536.14	chr14	+	6422	24	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	-243	0	combination_of_known_junctions	FALSE	canonical	1	5692	junction_1	115432.75680243218	NA	8	2	TRUE	NA	NA	NA	B	coding	1783	5352	891	6242	80.0	40	True	NA	NA
PB.3536.15	chr14	+	6135	23	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	5692	junction_1	95129.12727603246	NA	1	NA	TRUE	NA	NA	NA	B	coding	1783	5352	604	5955	80.0	-5	True	NA	NA
PB.3536.10	chr14	+	6543	23	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	187	3	no_combination_of_known_junctions	FALSE	canonical	1	47177	junction_1	90303.20358992423	NA	0	NA	TRUE	NA	NA	NA	B	coding	1783	5352	945	6296	15.0	-4406	False	AATAAA	-20
PB.3536.11	chr14	+	2233	6	novel_in_catalog	SIPA1L1	novel	521	6	NA	NA	-350	30850	combination_of_known_junctions	FALSE	canonical	1	30065	junction_1	88712.94269361152	NA	0	NA	TRUE	NA	NA	NA	B	coding	520	1560	673	2232	65.0	-4067	False	GGGGCT	-41
PB.1933.5	chr11	+	2578	3	full-splice_match	PTPMT1	ENST00000527079.2	2272	3	-307	1	-8	-1	multi-exon	FALSE	canonical	1	733762	junction_1	2615.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	352	747	15.0	-8	True	AATAAA	-20
PB.1933.4	chr11	+	817	4	full-splice_match	PTPMT1	ENST00000326674.9	768	4	-11	-38	-9	38	multi-exon	FALSE	canonical	1	733762	junction_2	20346.71348290813	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	34	639	50.0	-9	True	NA	NA
PB.1933.3	chr11	+	2272	3	full-splice_match	PTPMT1	ENST00000326656.12	928	3	-10	-1334	-10	-8	multi-exon	FALSE	canonical	1	392878	junction_2	193211.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	137	414	35	448	20.0	-10	True	AATAAA	-13
PB.1933.2	chr11	+	2469	4	full-splice_match	PTPMT1	ENST00000326674.9	768	4	-12	-1689	-10	-3	multi-exon	FALSE	canonical	1	733762	junction_2	20346.71348290813	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	35	640	10.0	-10	True	AATAAA	-18
PB.1933.1	chr11	+	3182	4	full-splice_match	PTPMT1	ENST00000326674.9	768	4	-12	-2402	-10	710	multi-exon	FALSE	canonical	1	733762	junction_2	20346.71348290813	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	35	640	75.0	-10	True	NA	NA
PB.8382.6	chr3	+	1787	6	full-splice_match	RAB7A	ENST00000265062.7	2244	6	46	411	-25	32	multi-exon	FALSE	canonical	1	1525461	junction_1	673161.9625791108	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	201	824	50.0	-15	True	GATAAA	-14
PB.8382.7	chr3	+	2345	7	novel_not_in_catalog	RAB7A	novel	2244	6	NA	NA	-12	3	any annotated donor/acceptor	FALSE	canonical	1	3023	junction_1	1404792.131138714	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	345	968	15.0	-2	True	AATAAA	-21
PB.8382.4	chr3	+	2915	6	novel_not_in_catalog	RAB7A	novel	2244	6	NA	NA	-27	11106	any annotated donor/acceptor	FALSE	canonical	1	4852	junction_5	1164714.204030053	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	203	856	65.0	-17	True	NA	NA
PB.8382.5	chr3	+	1496	6	full-splice_match	RAB7A	ENST00000265062.7	2244	6	46	702	-25	-259	multi-exon	FALSE	canonical	1	1525461	junction_1	673161.9625791108	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	201	824	30.0	-15	True	ATTAAA	-18
PB.5936.1	chr19	+	625	4	full-splice_match	PSENEN	ENST00000587708.6	1661	4	520	516	15	-1	multi-exon	FALSE	canonical	1	929100	junction_1	176452.7265139936	NA	0	NA	TRUE	NA	NA	NA	A	coding	101	306	164	469	20.0	-17	True	AATAAA	-16
PB.8382.3	chr3	+	2181	6	full-splice_match	RAB7A	ENST00000265062.7	2244	6	64	-1	-7	1	multi-exon	FALSE	canonical	1	1525461	junction_1	673161.9625791108	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	183	806	15.0	3	True	AATAAA	-19
PB.2986.1	chr12	-	2110	1	full-splice_match	HCAR3	ENST00000528880.2	2137	1	26	1	26	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	387	1164	130	1293	15.0	-59	False	AATAAA	-15
PB.729.8	chr1	-	2195	4	novel_in_catalog	GOLPH3L	novel	2999	5	NA	NA	-45	-837	no_combination_of_known_junctions	FALSE	canonical	1	10780	junction_2	148465.82390645405	NA	2	NA	TRUE	NA	NA	NA	C	coding	241	726	211	936	10.0	-6	True	AATAAA	-20
PB.729.9	chr1	-	2369	6	novel_not_in_catalog	GOLPH3L	novel	2999	5	NA	NA	-38	-842	any annotated donor/acceptor	FALSE	canonical	1	2052	junction_3	162111.3644041034	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	510	1115	20.0	1	True	AATAAA	-15
PB.729.7	chr1	-	2298	5	full-splice_match	GOLPH3L	ENST00000271732.7	2999	5	-133	834	-13	-834	multi-exon	FALSE	canonical	1	226146	junction_3	48662.086347458426	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	179	1036	20.0	-4	True	AATAAA	-23
PB.729.4	chr1	-	3011	4	novel_in_catalog	GOLPH3L	novel	2999	5	NA	NA	-29	-5	no_combination_of_known_junctions	FALSE	canonical	1	10780	junction_2	148465.82390645405	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	195	920	15.0	10	True	AATAAA	-17
PB.3935.14	chr15	-	2985	20	incomplete-splice_match	DENND4A	ENST00000564674.5	3389	22	179	5848	10	-990	3prime_fragment	FALSE	canonical	1	54881	junction_19	43270.340554993934	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2778	207	2984	80.0	-14	True	NA	NA
PB.3935.13	chr15	-	3508	20	incomplete-splice_match	DENND4A	ENST00000564674.5	3389	22	131	5373	-38	-515	3prime_fragment	FALSE	canonical	1	54881	junction_19	43270.340554993934	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	255	3092	85.0	510	False	NA	NA
PB.3935.12	chr15	-	2496	1	novel_in_catalog	DENND4A	novel	8665	33	NA	NA	3201	-4207	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.3935.11	chr15	-	6177	33	full-splice_match	DENND4A	ENST00000443035.7	8665	33	-169	2657	0	-3	multi-exon	FALSE	canonical	1	28954	junction_14	58785.325212395896	NA	0	NA	TRUE	NA	NA	NA	C	coding	1906	5721	386	6106	30.0	-1	True	TATAAA	-19
PB.8203.1	chr3	+	3253	1	novel_in_catalog	C3orf67-AS1	novel	570	2	NA	NA	17680	-125257	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	A	coding	248	747	1176	1922	55.0	NA	False	NA	NA
PB.8563.13	chr3	+	5424	33	novel_not_in_catalog	EIF4G1	novel	5516	33	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	414	junction_19	876823.2464671372	NA	57	4	TRUE	NA	NA	NA	C	coding	1081	3246	210	3455	15.0	-49	True	ATTAAA	-14
PB.7575.12	chr21	-	4886	21	novel_not_in_catalog	MCM3AP	novel	6193	28	NA	NA	22	1	any annotated donor/acceptor	FALSE	canonical	1	71249	junction_20	99081.79803872909	NA	0	NA	TRUE	NA	NA	NA	C	coding	1435	4305	582	4886	5.0	-11	True	TATAAA	-17
PB.8563.11	chr3	+	5277	32	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-10	-1	no_combination_of_known_junctions	FALSE	canonical	1	21552	junction_3	736348.9141760117	NA	0	NA	TRUE	NA	NA	NA	C	coding	1570	4713	123	4835	15.0	7	True	ATTAAA	-13
PB.8563.10	chr3	+	5473	33	full-splice_match	EIF4G1	ENST00000414031.5	5569	33	94	2	-10	0	multi-exon	FALSE	canonical	1	39483	junction_3	763871.7879700958	NA	1	NA	TRUE	NA	NA	NA	C	coding	1559	4680	351	5030	15.0	-10	True	ATTAAA	-14
PB.7575.17	chr21	-	2167	1	novel_in_catalog	MCM3AP	novel	6333	29	NA	NA	33	907	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	396	1188	979	2166	55.0	0	True	NA	NA
PB.7575.16	chr21	-	3145	8	novel_not_in_catalog	MCM3AP	novel	6193	28	NA	NA	33	-2746	any annotated donor/acceptor	FALSE	canonical	1	71249	junction_7	107094.48204387049	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	571	2826	75.0	0	True	NA	NA
PB.7575.15	chr21	-	4071	10	novel_not_in_catalog	MCM3AP	novel	6193	28	NA	NA	33	-1082	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	132294.9628368367	NA	1	NA	TRUE	NA	NA	NA	C	coding	822	2469	675	3143	90.0	0	True	NA	NA
PB.7575.14	chr21	-	4977	21	novel_in_catalog	MCM3AP	novel	6193	28	NA	NA	32	-2	combination_of_known_junctions	FALSE	canonical	1	131473	junction_20	90642.9896745882	NA	0	NA	TRUE	NA	NA	NA	C	coding	1434	4302	676	4977	10.0	-1	True	TATAAA	-14
PB.8563.19	chr3	+	5467	33	novel_not_in_catalog	EIF4G1	novel	5516	33	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1658	junction_1	782259.8335971055	NA	1	NA	TRUE	NA	NA	NA	C	coding	1599	4800	225	5024	15.0	-37	True	ATTAAA	-14
PB.8563.18	chr3	+	3030	18	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	33982	junction_1	814279.5914183803	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2889	141	3029	70.0	-37	True	NA	NA
PB.4760.2	chr17	-	2479	2	incomplete-splice_match	VAMP2	ENST00000404970.3	1479	4	580	-1	9	1	intron_retention	FALSE	canonical	1	2031728	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-19	True	NA	NA
PB.1027.4	chr1	-	2084	8	full-splice_match	DDX59	ENST00000331314.10	2289	8	119	86	57	-4	multi-exon	FALSE	canonical	1	135074	junction_4	43413.485952300725	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	96	1955	20.0	38	True	TTTAAA	-40
PB.4760.1	chr17	-	2154	5	full-splice_match	VAMP2	ENST00000316509.10	2153	5	-6	5	-6	-5	multi-exon	FALSE	canonical	1	841469	junction_4	476222.7976163048	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	103	453	30.0	-34	True	AATAAA	-13
PB.1027.1	chr1	-	2179	8	novel_in_catalog	DDX59	novel	2900	8	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	13954	junction_1	75877.79374273677	NA	2	NA	TRUE	NA	NA	NA	C	coding	557	1674	207	1880	20.0	-73	True	NA	NA
PB.1027.3	chr1	-	2483	8	novel_in_catalog	DDX59	novel	2900	8	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	4172	junction_7	80299.02098267146	NA	2	NA	TRUE	NA	NA	NA	C	coding	619	1860	408	2267	15.0	-74	True	AATAAA	-22
PB.1027.2	chr1	-	2177	8	novel_in_catalog	DDX59	novel	2900	8	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	1	12416	junction_1	76322.34664599234	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	141	1844	40.0	-7	True	NA	NA
PB.291.2	chr1	-	3482	11	full-splice_match	STK40	ENST00000373132.3	3621	11	133	6	113	-6	multi-exon	FALSE	canonical	1	190595	junction_10	106899.92181961593	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	50	1357	15.0	767	False	AATAAA	-15
PB.291.1	chr1	-	3857	12	novel_in_catalog	STK40	novel	4837	9	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	1	60530	junction_10	158998.24143187795	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	404	1726	0.0	15	True	AATAAA	-21
PB.1184.5	chr1	+	2103	8	full-splice_match	RAB4A	ENST00000366690.4	2966	8	35	828	-27	-825	multi-exon	FALSE	canonical	1	283502	junction_1	186990.01450301227	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	174	830	20.0	56	True	AGTAAA	-16
PB.11495.20	chr9	-	4001	4	novel_not_in_catalog	TOPORS	novel	4098	3	NA	NA	-68	12	any annotated donor/acceptor	FALSE	canonical	1	3820	junction_2	56155.617991435196	NA	6	NA	TRUE	NA	NA	NA	C	coding	978	2937	492	3428	85.0	-36	True	AGTAAA	-15
PB.12099.11	chrX	+	2053	13	full-splice_match	MAGED2	ENST00000375058.5	2048	13	2	-7	2	2	multi-exon	FALSE	canonical	1	430902	junction_1	404750.4457589337	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	91	1911	10.0	-5	True	NA	NA
PB.12099.10	chrX	+	2071	12	full-splice_match	MAGED2	ENST00000218439.8	1958	12	21	-134	-12	134	multi-exon	FALSE	canonical	1	430902	junction_1	406531.1756799459	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	105	1925	15.0	-19	True	NA	NA
PB.12099.13	chrX	+	2409	11	incomplete-splice_match	MAGED2	ENST00000375058.5	2048	13	704	-6	15	1	intron_retention	FALSE	canonical	1	1588775	junction_3	123041.80192117636	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	258	2078	10.0	-6	True	NA	NA
PB.12099.12	chrX	+	2471	12	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	10	0	intron_retention	FALSE	canonical	1	154419	junction_1	493411.92212729855	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	184	1509	10.0	-11	True	NA	NA
PB.12099.15	chrX	+	2842	10	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-16	2	intron_retention	FALSE	canonical	1	154419	junction_1	545235.7521445807	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	173	1234	10.0	0	True	NA	NA
PB.12099.14	chrX	+	2331	12	full-splice_match	MAGED2	ENST00000396224.1	2026	12	15	-320	15	2	multi-exon	FALSE	canonical	1	154419	junction_1	483177.6899549464	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	179	1999	10.0	-6	True	NA	NA
PB.12099.17	chrX	+	2132	13	novel_in_catalog	MAGED2	novel	2066	12	NA	NA	-13	2	intron_retention	FALSE	canonical	1	154419	junction_1	474171.78671912744	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	170	1990	10.0	3	True	NA	NA
PB.12099.16	chrX	+	2212	12	incomplete-splice_match	MAGED2	ENST00000375058.5	2048	13	712	-7	-14	2	5prime_fragment	FALSE	canonical	1	1260053	junction_11	191115.88085450509	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	250	2070	10.0	2	True	NA	NA
PB.1923.1	chr11	+	1662	9	full-splice_match	C11orf49	ENST00000278460.11	1645	9	-1	-16	1	-1	multi-exon	FALSE	canonical	1	206004	junction_8	53595.915520681236	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	61	1056	30.0	-32	True	AATAAA	-18
PB.1923.2	chr11	+	1933	8	full-splice_match	C11orf49	ENST00000395460.6	1916	8	-20	3	0	-1	multi-exon	FALSE	canonical	1	285781	junction_2	37947.50417863808	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	59	883	30.0	-30	True	AATAAA	-18
PB.6802.35	chr2	-	4618	31	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-46	12055	-7	-12055	3prime_fragment	FALSE	canonical	1	81987	junction_30	32670.80601462957	NA	0	NA	TRUE	NA	NA	NA	C	coding	1514	4542	75	4616	45.0	-1	True	TATAAA	-6
PB.6802.34	chr2	-	5372	34	novel_not_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-46	-35826	any annotated donor/acceptor	FALSE	canonical	1	23026	junction_1	39313.486769412586	NA	0	NA	TRUE	NA	NA	NA	B	coding	1624	4875	75	4949	40.0	-1	True	AATAAA	-22
PB.6802.37	chr2	-	4171	28	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-44	28174	-5	-28174	3prime_fragment	FALSE	canonical	1	81987	junction_27	34435.105077257365	NA	1	NA	TRUE	NA	NA	NA	C	coding	1322	3969	73	4041	25.0	1	True	CATAAA	-5
PB.6802.36	chr2	-	4253	29	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-72	16371	-33	-16371	3prime_fragment	FALSE	canonical	1	81987	junction_28	33815.11128646964	NA	4	NA	TRUE	NA	NA	NA	C	coding	1384	4152	101	4252	50.0	-27	False	NA	NA
PB.6802.39	chr2	-	3819	27	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-15	30754	-15	-30754	3prime_fragment	FALSE	canonical	1	81987	junction_26	34827.87557090648	NA	4	2	TRUE	NA	NA	NA	C	coding	1258	3774	44	3817	60.0	30	True	NA	NA
PB.6802.38	chr2	-	3945	28	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-44	28400	-5	-28400	3prime_fragment	FALSE	canonical	1	81987	junction_27	34435.105077257365	NA	0	NA	TRUE	NA	NA	NA	C	coding	1291	3873	73	3945	45.0	1	True	NA	NA
PB.10353.30	chr7	+	5007	5	novel_not_in_catalog	SUN1	novel	520	4	NA	NA	1	-1418	intron_retention	FALSE	non_canonical	0	0	junction_4	230659.43326187096	NA	0	NA	TRUE	NA	NA	NA	B	coding	204	615	51	665	80.0	1	True	NA	NA
PB.102.11	chr1	+	3728	16	novel_not_in_catalog	TNFRSF8	novel	3593	14	NA	NA	560	-1	any annotated donor/acceptor	FALSE	canonical	1	683	junction_1	31902.288379501697	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	415	2055	35.0	-1072	False	CATAAA	-16
PB.102.10	chr1	+	3574	15	novel_not_in_catalog	TNFRSF8	novel	3593	14	NA	NA	631	-1	any annotated donor/acceptor	FALSE	canonical	1	9607	junction_1	26088.204122783933	NA	4	NA	TRUE	NA	NA	NA	C	coding	546	1641	261	1901	35.0	-1001	False	CATAAA	-16
PB.102.12	chr1	+	2153	3	incomplete-splice_match	TNFRSF8	ENST00000413146.6	2363	5	9688	3	9653	-1	5prime_fragment	FALSE	canonical	1	47256	junction_1	6416.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	82	480	35.0	-8391	False	CATAAA	-16
PB.577.1	chr1	-	3259	3	intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12437	junction_2	17079.5	NA	1	NA	FALSE	NA	NA	NA	A	coding	103	312	2528	2839	35.0	13	True	AATAAA	-20
PB.577.3	chr1	-	4979	1	intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.577.2	chr1	-	1519	4	intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4941	junction_2	18960.48185627734	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.577.5	chr1	-	3040	1	intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	-4	True	ATTAAA	-24
PB.577.4	chr1	-	3911	1	intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	-1	True	AGTAAA	-31
PB.577.6	chr1	-	1608	1	intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-1	True	CATAAA	-39
PB.1442.4	chr10	+	1809	4	novel_not_in_catalog	SRGN	novel	802	2	NA	NA	0	-9	any annotated donor/acceptor	FALSE	canonical	1	98	junction_2	4576680.594434816	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	621	1127	30.0	1	True	ATTAAA	-15
PB.8598.12	chr3	+	4582	12	full-splice_match	IL1RAP	ENST00000447382.5	4769	12	27	160	-1	-160	multi-exon	FALSE	canonical	1	53958	junction_1	38325.99627682978	NA	4	NA	TRUE	NA	NA	NA	C	coding	570	1713	223	1935	55.0	-4	True	AATAAA	-22
PB.1442.2	chr10	+	1218	3	full-splice_match	SRGN	ENST00000242465.3	1208	3	-12	2	0	-2	multi-exon	FALSE	canonical	1	6202485	junction_1	1761539.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	56	529	15.0	1	True	ATTAAA	-22
PB.1442.3	chr10	+	933	3	full-splice_match	SRGN	ENST00000242465.3	1208	3	-15	290	-3	-20	multi-exon	FALSE	canonical	1	6202485	junction_1	1761539.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	59	532	90.0	-2	True	NA	NA
PB.1442.1	chr10	+	1820	1	genic	SRGN	novel	NA	NA	NA	NA	-6	-14622	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-5	True	NA	NA
PB.7191.5	chr20	+	2132	9	full-splice_match	POLR3F	ENST00000377603.4	2416	9	286	-2	18	2	multi-exon	FALSE	canonical	1	106687	junction_2	25556.45485366662	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	95	1045	20.0	21	True	NA	NA
PB.7191.4	chr20	+	1815	5	incomplete-splice_match	POLR3F	ENST00000377603.4	2416	9	271	8179	3	3453	3prime_fragment	FALSE	canonical	1	106687	junction_2	16315.06257075038	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	110	598	20.0	6	True	NA	NA
PB.7191.1	chr20	+	1437	9	full-splice_match	POLR3F	ENST00000377603.4	2416	9	261	718	-1	99	multi-exon	FALSE	canonical	1	106687	junction_2	25556.45485366662	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	120	1070	25.0	-4	True	TATAAA	-19
PB.7191.3	chr20	+	2029	8	novel_in_catalog	POLR3F	novel	2416	9	NA	NA	2	-4	no_combination_of_known_junctions	FALSE	canonical	1	967	junction_4	55965.54118602711	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	412	948	35.0	5	True	NA	NA
PB.7191.2	chr20	+	2251	9	full-splice_match	POLR3F	ENST00000462997.5	2257	9	2	4	2	-4	multi-exon	FALSE	canonical	1	3332	junction_1	51717.59547956092	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	343	1170	35.0	-1	True	NA	NA
PB.8224.3	chr3	+	2028	10	novel_in_catalog	MITF	novel	4814	10	NA	NA	-27761	0	combination_of_known_junctions	FALSE	canonical	1	3087	junction_1	36396.68129695479	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	223	1629	90.0	-1	True	NA	NA
PB.1971.21	chr11	-	3004	12	incomplete-splice_match	DDB1	ENST00000301764.11	4506	27	241	15397	-59	-395	3prime_fragment	FALSE	canonical	1	1156131	junction_8	200272.80366007704	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	158	1612	100.0	-28	True	NA	NA
PB.8224.2	chr3	+	2100	10	full-splice_match	MITF	ENST00000642352.1	4767	10	-22	2689	-14	0	multi-exon	FALSE	canonical	1	41881	junction_1	25535.880969508158	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	139	1701	90.0	-22	True	NA	NA
PB.11284.25	chr8	-	3972	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-48	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	517612.5711917382	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	737	1810	20.0	-1	True	AGTAAA	-15
PB.7047.10	chr2	+	6431	7	novel_in_catalog	RHBDD1	novel	577	2	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	7259	junction_1	70445.31475253221	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	1805	2752	60.0	3	True	NA	NA
PB.3246.2	chr13	-	2222	11	novel_not_in_catalog	KDELC1	novel	2060	10	NA	NA	-25	0	any annotated donor/acceptor	FALSE	canonical	1	6727	junction_7	32550.85606923419	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	1163	2014	35.0	-57	False	AATAAA	-15
PB.3246.3	chr13	-	2005	10	novel_not_in_catalog	KDELC1	novel	2060	10	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	3161	junction_5	22453.13110613163	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	328	1797	35.0	-22	True	AATAAA	-15
PB.3246.1	chr13	-	2055	10	full-splice_match	KDELC1	ENST00000376004.4	2060	10	4	1	4	-1	multi-exon	FALSE	canonical	1	46429	junction_3	21642.82825417016	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	334	1842	25.0	-28	True	AATAAA	-20
PB.1478.1	chr10	+	2347	11	full-splice_match	PLAU	ENST00000372764.3	2321	11	-25	-1	-15	1	multi-exon	FALSE	canonical	1	298203	junction_1	282709.72599781567	NA	1	NA	TRUE	NA	NA	NA	A	coding	431	1296	119	1414	20.0	0	True	AATAAA	-33
PB.2028.1	chr11	+	4857	28	novel_not_in_catalog	CCDC88B	novel	5235	25	NA	NA	-29	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	95321.2760922913	NA	0	NA	TRUE	NA	NA	NA	B	coding	1332	3999	74	4072	10.0	-22	True	AATAAA	-11
PB.6880.19	chr2	+	6123	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	154	-2088	-25	2088	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	337	3375	20.0	-7	True	AATACA	-16
PB.6880.18	chr2	+	3694	29	novel_not_in_catalog	ITGA4	novel	1846	2	NA	NA	-25	937	any annotated donor/acceptor	FALSE	canonical	1	10643	junction_28	115208.33052107303	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	337	3375	40.0	-7	True	AATAAA	-24
PB.200.1	chr1	+	6161	20	novel_in_catalog	ARID1A	novel	6521	20	NA	NA	1097	15	intron_retention	FALSE	canonical	1	144227	junction_1	89568.73634031636	NA	0	NA	TRUE	NA	NA	NA	A	coding	1901	5706	53	5758	95.0	-885	False	NA	NA
PB.2732.1	chr12	+	5099	11	incomplete-splice_match	LEMD3	ENST00000308330.2	4764	13	-27	0	-27	0	intron_retention	TRUE	canonical	1	136458	junction_4	46536.53890052418	NA	2	NA	TRUE	NA	NA	NA	C	coding	833	2502	54	2555	5.0	-479	False	ATTAAA	-16
PB.6880.10	chr2	+	6467	27	incomplete-splice_match	ITGA4	ENST00000397033.6	4189	28	971	-2905	-45	2905	5prime_fragment	FALSE	canonical	1	236407	junction_4	89779.53429137092	NA	5	NA	TRUE	NA	NA	NA	C	coding	820	2463	440	2902	30.0	2	True	AATAAA	-11
PB.2732.3	chr12	+	4181	13	full-splice_match	LEMD3	ENST00000308330.2	4764	13	542	41	530	-41	multi-exon	FALSE	canonical	1	136458	junction_4	45889.12183754265	NA	3	NA	TRUE	NA	NA	NA	C	coding	594	1785	436	2220	70.0	90	False	NA	NA
PB.2732.2	chr12	+	4390	13	full-splice_match	LEMD3	ENST00000308330.2	4764	13	0	374	0	-374	multi-exon	FALSE	canonical	1	136458	junction_4	45889.12183754265	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	27	2762	20.0	-12	True	NA	NA
PB.2732.5	chr12	+	3320	13	full-splice_match	LEMD3	ENST00000308330.2	4764	13	1448	-4	1436	4	multi-exon	FALSE	canonical	1	136458	junction_4	45889.12183754265	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	1	1314	20.0	996	False	ATTAAA	-20
PB.2732.4	chr12	+	4742	13	novel_not_in_catalog	LEMD3	novel	4764	13	NA	NA	-1	8	any annotated donor/acceptor	FALSE	canonical	1	16	junction_11	73855.59390473299	NA	18	2	TRUE	NA	NA	NA	C	coding	852	2559	28	2586	30.0	-13	True	ATTAAA	-24
PB.2732.7	chr12	+	2578	5	incomplete-splice_match	LEMD3	ENST00000308330.2	4764	13	71331	41	336	-41	5prime_fragment	FALSE	canonical	1	192154	junction_3	28949.272610680568	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	15	617	70.0	NA	False	NA	NA
PB.6880.16	chr2	+	4309	29	novel_not_in_catalog	ITGA4	novel	1846	2	NA	NA	-25	1552	any annotated donor/acceptor	FALSE	canonical	1	10643	junction_28	115208.33052107303	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	337	3375	60.0	-7	True	AATAAA	-9
PB.4947.2	chr17	-	2437	15	full-splice_match	FBXL20	ENST00000264658.10	10388	15	7	7944	0	-1	multi-exon	FALSE	canonical	1	40398	junction_14	24123.258941933862	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	255	1565	20.0	-32	True	AATAAA	-23
PB.6305.12	chr2	-	4773	13	incomplete-splice_match	ADAM17	ENST00000310823.8	4391	19	0	10787	0	-66	3prime_fragment	FALSE	canonical	1	185697	junction_9	45392.42917663204	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	226	1959	50.0	-1	True	AATAAA	-41
PB.8219.7	chr3	-	2140	18	full-splice_match	EOGT	ENST00000383701.7	4731	18	277	2314	-13	90	multi-exon	FALSE	canonical	1	57969	junction_16	35799.86370312923	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	467	2050	20.0	-24	True	ATTAAA	-26
PB.8219.6	chr3	-	3714	18	full-splice_match	EOGT	ENST00000383701.7	4731	18	351	666	-11	-648	multi-exon	FALSE	canonical	1	57969	junction_16	35799.86370312923	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	393	1976	70.0	50	False	TTTAAA	-33
PB.6204.4	chr19	+	2909	18	novel_in_catalog	CNOT3	novel	2890	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	20644	junction_16	199411.26662347998	NA	1	NA	TRUE	NA	NA	NA	C	coding	719	2160	288	2447	10.0	-5	True	AATAAA	-14
PB.8219.2	chr3	-	4359	18	novel_in_catalog	EOGT	novel	4731	18	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	1	9299	junction_16	42631.61905891888	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	379	1962	30.0	-24	True	AATAAA	-26
PB.8219.1	chr3	-	4453	18	full-splice_match	EOGT	ENST00000383701.7	4731	18	271	7	-19	-4	multi-exon	FALSE	canonical	1	57969	junction_16	35799.86370312923	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	473	2056	30.0	-30	True	AATAAA	-26
PB.8954.1	chr4	-	4080	23	full-splice_match	SEC24D	ENST00000280551.10	4030	23	-52	2	-19	-2	multi-exon	FALSE	canonical	1	188245	junction_22	92712.89816092883	NA	8	1	TRUE	NA	NA	NA	C	coding	1032	3099	292	3390	30.0	5	True	AATAAA	-17
PB.6305.10	chr2	-	3006	19	full-splice_match	ADAM17	ENST00000497134.6	4413	19	4	1403	4	-32	multi-exon	FALSE	canonical	1	185697	junction_15	47426.35749064276	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	244	2718	35.0	5	True	AATACA	-17
PB.1256.2	chr1	-	2620	2	incomplete-splice_match	SH3BP5L	ENST00000366472.5	3861	7	701	12394	-297	-6815	3prime_fragment	FALSE	canonical	1	320018	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-18	True	NA	NA
PB.4566.6	chr16	+	2226	11	novel_not_in_catalog	CENPN	novel	2481	11	NA	NA	0	-1629	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	198520.37197688303	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	75	992	5.0	-31	True	NA	NA
PB.4566.7	chr16	+	2757	11	novel_not_in_catalog	CENPN	novel	2481	11	NA	NA	4	-1633	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	198520.37197688303	NA	1	1	TRUE	NA	NA	NA	C	coding	305	918	62	979	5.0	-18	True	NA	NA
PB.4566.4	chr16	+	2365	12	novel_not_in_catalog	CENPN	novel	2481	11	NA	NA	-5	-1629	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	177458.6493288968	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	87	1106	5.0	-43	True	NA	NA
PB.4566.5	chr16	+	2330	12	novel_not_in_catalog	CENPN	novel	2481	11	NA	NA	0	-1627	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	177458.6493288968	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	75	1094	5.0	-31	True	NA	NA
PB.4566.2	chr16	+	1422	7	full-splice_match	CENPN	ENST00000299572.9	1398	7	-35	11	19	0	multi-exon	FALSE	canonical	1	259982	junction_6	118903.73104696459	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	772	1386	20.0	-11	True	AATAAA	-16
PB.4566.3	chr16	+	2326	10	full-splice_match	CENPN	ENST00000428963.6	971	10	-713	-642	-21	-7	multi-exon	FALSE	canonical	1	41198	junction_6	177399.10854077517	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	758	1675	45.0	3	True	AATAAA	-7
PB.4566.1	chr16	+	1754	11	full-splice_match	CENPN	ENST00000305850.9	2481	11	707	20	-2	-7	multi-exon	FALSE	canonical	1	174386	junction_8	153003.7405590138	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	84	1103	45.0	-40	True	AATAAA	-7
PB.4566.8	chr16	+	2852	12	novel_not_in_catalog	CENPN	novel	2481	11	NA	NA	9	-1629	any annotated donor/acceptor	FALSE	canonical	1	463	junction_11	177382.89585703606	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	57	1076	5.0	-13	True	NA	NA
PB.9719.5	chr6	-	3348	9	novel_not_in_catalog	SSR1	novel	1808	10	NA	NA	3	0	intron_retention	FALSE	canonical	1	976	junction_1	609811.1633621587	NA	4	NA	TRUE	NA	NA	NA	C	coding	307	924	60	983	10.0	19	True	CATAAA	-14
PB.7146.4	chr20	-	2235	9	full-splice_match	DDRGK1	ENST00000354488.7	1306	9	15	-944	15	944	multi-exon	FALSE	canonical	1	436191	junction_8	272254.4854955332	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	44	988	60.0	9	True	AAGAAA	-30
PB.6085.1	chr19	-	2798	22	full-splice_match	EML2	ENST00000536630.5	2791	22	-1	-6	-1	4	multi-exon	FALSE	canonical	1	6071	junction_21	128820.5027120455	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	141	2531	15.0	-14	True	AATAAA	-19
PB.9719.6	chr6	-	3337	9	novel_not_in_catalog	SSR1	novel	1808	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	1050	junction_2	610117.1765863403	NA	8	1	TRUE	NA	NA	NA	C	coding	265	798	69	866	10.0	10	True	CATAAA	-14
PB.9719.1	chr6	-	5873	9	novel_not_in_catalog	SSR1	novel	1808	10	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	476534.49004713644	NA	4	1	TRUE	NA	NA	NA	C	coding	286	861	80	940	35.0	-1	True	ATTAAA	-16
PB.9719.3	chr6	-	3234	8	full-splice_match	SSR1	ENST00000244763.8	9669	8	7	6428	-2	-1	multi-exon	FALSE	canonical	1	1109030	junction_7	194911.13885699457	NA	24	NA	TRUE	NA	NA	NA	C	coding	286	861	81	941	10.0	-2	True	CATAAA	-13
PB.9719.2	chr6	-	3039	9	novel_not_in_catalog	SSR1	novel	1808	10	NA	NA	-1	2834	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	476534.49004713644	NA	9	1	TRUE	NA	NA	NA	C	coding	286	861	80	940	90.0	-1	True	TATAAA	-34
PB.9719.8	chr6	-	3041	8	full-splice_match	SSR1	ENST00000489567.5	1893	8	-36	-1112	-3	0	multi-exon	FALSE	canonical	1	10010	junction_5	503276.7302759639	NA	3	NA	TRUE	NA	NA	NA	C	coding	218	657	91	747	10.0	-12	True	CATAAA	-14
PB.1686.4	chr10	+	2780	12	novel_in_catalog	WDR11	novel	4732	29	NA	NA	2	-1377	combination_of_known_junctions	FALSE	canonical	1	8190	junction_1	93137.66102321891	NA	1	NA	TRUE	NA	NA	NA	B	coding	307	924	856	1779	80.0	-28	True	GATAAA	-27
PB.1686.5	chr10	+	4462	28	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	108608.31284599616	NA	1	NA	TRUE	NA	NA	NA	B	coding	965	2898	755	3652	10.0	-21	True	AATAAA	-16
PB.1686.6	chr10	+	5278	28	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	-6	3	intron_retention	FALSE	non_canonical	0	0	junction_27	98110.90033144313	NA	0	NA	TRUE	NA	NA	NA	B	coding	1146	3441	36	3476	5.0	-6	True	AATAAA	-20
PB.1686.7	chr10	+	4565	29	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	-4	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_28	106340.55449032578	NA	0	NA	TRUE	NA	NA	NA	B	coding	965	2898	856	3753	5.0	-4	True	AATAAA	-18
PB.1686.1	chr10	+	4530	29	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_28	96845.76020981028	NA	0	NA	TRUE	NA	NA	NA	B	coding	1224	3675	46	3720	10.0	-16	True	AATAAA	-16
PB.12145.1	chrX	+	2878	6	full-splice_match	SLC16A2	ENST00000587091.5	4161	6	28	1255	28	54	multi-exon	FALSE	canonical	1	79593	junction_1	18219.80051921535	NA	0	NA	TRUE	NA	NA	NA	A	coding	539	1620	150	1769	70.0	-4	True	NA	NA
PB.1686.3	chr10	+	2684	20	incomplete-splice_match	WDR11	ENST00000263461.10	4732	29	186	9387	-1	-3038	3prime_fragment	FALSE	canonical	1	112681	junction_1	77276.29846777656	NA	0	NA	TRUE	NA	NA	NA	B	coding	874	2622	61	2682	15.0	-31	True	NA	NA
PB.6736.1	chr2	+	6499	41	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-48	-28	combination_of_known_junctions	FALSE	canonical	1	38885	junction_1	102850.32431010791	NA	1	NA	TRUE	NA	NA	NA	C	coding	1544	4635	207	4841	85.0	-195	False	NA	NA
PB.6736.3	chr2	+	6376	41	full-splice_match	UGGT1	ENST00000259253.10	10650	41	-3	4277	-3	-28	multi-exon	FALSE	canonical	1	101592	junction_1	99023.00664354472	NA	0	NA	TRUE	NA	NA	NA	C	coding	1555	4668	51	4718	85.0	-7	True	NA	NA
PB.6736.2	chr2	+	6000	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-41	-529	combination_of_known_junctions	FALSE	canonical	1	62539	junction_20	104109.59194248136	NA	0	NA	TRUE	NA	NA	NA	C	coding	1547	4644	200	4843	20.0	-188	False	NA	NA
PB.12344.16	chrX	-	8114	46	full-splice_match	FLNA	ENST00000360319.9	8278	46	164	0	84	0	multi-exon	TRUE	canonical	1	2674590	junction_38	1237271.571567971	NA	5	NA	TRUE	NA	NA	NA	C	coding	2551	7656	139	7794	5.0	-12	True	AATAAA	-18
PB.12344.17	chrX	-	8080	46	novel_not_in_catalog	FLNA	novel	8225	47	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_41	1513537.234015581	NA	2	1	TRUE	NA	NA	NA	C	coding	2224	6675	1086	7760	5.0	-6	True	AATAAA	-18
PB.6736.7	chr2	+	3075	1	genic	UGGT1	novel	NA	NA	NA	NA	-20	-13800	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-20	True	TATAAA	-22
PB.6736.6	chr2	+	4744	41	novel_in_catalog	UGGT1	novel	586	5	NA	NA	4	-139	combination_of_known_junctions	FALSE	canonical	1	38885	junction_1	102850.32431010791	NA	2	NA	TRUE	NA	NA	NA	C	coding	1544	4635	44	4678	25.0	0	True	AATAAA	-13
PB.2988.1	chr12	+	4631	32	novel_in_catalog	HIP1R	novel	3078	18	NA	NA	244	0	intron_retention	FALSE	canonical	1	38169	junction_1	83004.22774455106	NA	1	NA	TRUE	NA	NA	NA	C	coding	1056	3171	254	3424	25.0	-18	True	AATAAA	-24
PB.2988.2	chr12	+	4582	31	novel_in_catalog	HIP1R	novel	3078	18	NA	NA	27	0	intron_retention	FALSE	canonical	1	182522	junction_7	72135.35478489957	NA	2	1	TRUE	NA	NA	NA	C	coding	865	2598	99	2696	25.0	-4	True	AATAAA	-24
PB.2988.3	chr12	+	4507	32	full-splice_match	HIP1R	ENST00000253083.8	4539	32	32	0	-23	0	multi-exon	FALSE	canonical	1	182522	junction_7	71010.29476247725	NA	2	NA	TRUE	NA	NA	NA	C	coding	1068	3207	94	3300	25.0	1	True	AATAAA	-24
PB.2988.6	chr12	+	2591	14	incomplete-splice_match	HIP1R	ENST00000253083.8	4539	32	22675	9	-724	-9	5prime_fragment	FALSE	canonical	1	230426	junction_3	68867.49955826974	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	392	1393	10.0	9670	False	AATAAA	-15
PB.4786.2	chr17	-	3498	16	incomplete-splice_match	NCOR1	ENST00000395849.6	3419	17	9506	-147	-2089	43	5prime_fragment	TRUE	canonical	1	288307	junction_4	90426.20725627917	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3075	73	3147	20.0	NA	False	AATAGA	-18
PB.11336.3	chr8	-	5546	30	novel_not_in_catalog	WASHC5	novel	976	3	NA	NA	-2	-3	any annotated donor/acceptor	FALSE	canonical	1	2673	junction_7	108289.74520885317	NA	5	NA	TRUE	NA	NA	NA	C	coding	951	2856	303	3158	25.0	26	False	AGTAAA	-19
PB.1313.20	chr10	+	5228	6	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	26	1475	any annotated donor/acceptor	FALSE	canonical	1	1910	junction_1	61691.88375143038	NA	2	1	TRUE	NA	NA	NA	C	coding	349	1050	215	1264	90.0	0	True	NA	NA
PB.1313.21	chr10	+	3190	4	novel_in_catalog	PTER	novel	1203	5	NA	NA	27	-285	combination_of_known_junctions	FALSE	canonical	1	13639	junction_3	46717.808196304184	NA	2	NA	TRUE	NA	NA	NA	C	coding	302	909	86	994	25.0	1	True	NA	NA
PB.11336.4	chr8	-	4521	30	novel_not_in_catalog	WASHC5	novel	976	3	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	2080	junction_28	103429.2063400411	NA	0	NA	TRUE	NA	NA	NA	C	coding	1159	3480	689	4168	25.0	-28	True	AGTAAA	-18
PB.11336.5	chr8	-	4137	29	novel_not_in_catalog	WASHC5	novel	976	3	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	5007	junction_5	87777.1163407392	NA	4	1	TRUE	NA	NA	NA	C	coding	993	2982	291	3272	25.0	-25	True	AGTAAA	-15
PB.5873.1	chr19	-	2531	2	novel_not_in_catalog	AC010636.2	novel	522	5	NA	NA	13	-68462	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	0	True	AATAAA	-14
PB.624.1	chr1	-	2850	1	antisense	novelGene_MAGI3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	NA	False	AAAAAG	-15
PB.11284.28	chr8	-	3499	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	29	-547	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	517612.5711917382	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	738	1829	20.0	-2	True	ATTAAA	-36
PB.3472.9	chr14	-	2999	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	9	0	intron_retention	FALSE	canonical	1	18058	junction_4	116867.52112327873	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	916	1416	35.0	8	True	AATAAA	-16
PB.3472.8	chr14	-	4021	4	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	8	-6	intron_retention	FALSE	canonical	1	110938	junction_3	74647.18612394056	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	85	1098	35.0	7	True	AATAAA	-8
PB.6404.4	chr2	+	6660	33	novel_in_catalog	BIRC6	novel	15703	74	NA	NA	-110	-3076	combination_of_known_junctions	FALSE	canonical	1	98647	junction_13	64599.88243882008	NA	0	NA	TRUE	NA	NA	NA	B	coding	2209	6627	32	6658	50.0	-1	True	AATAGA	-42
PB.3472.1	chr14	-	4333	4	full-splice_match	L3HYPDH	ENST00000481608.1	758	4	-393	-3182	9	-70	multi-exon	FALSE	canonical	1	84705	junction_3	86694.51796970787	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	726	1226	40.0	8	True	ATTAAA	-17
PB.3472.3	chr14	-	2775	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	9	9	combination_of_known_junctions	FALSE	canonical	1	23052	junction_1	108703.03243010289	NA	3	NA	TRUE	NA	NA	NA	C	coding	166	501	726	1226	35.0	8	True	ATTAAA	-32
PB.3472.2	chr14	-	3070	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	8	14	intron_retention	FALSE	canonical	1	49999	junction_1	100588.35056152129	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	727	1227	25.0	7	True	ATTAAA	-37
PB.3472.5	chr14	-	4384	4	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	-7	1	intron_retention	FALSE	canonical	1	18058	junction_3	117599.9591676044	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	954	1454	30.0	-30	False	AATAAA	-15
PB.3472.4	chr14	-	2485	5	novel_in_catalog	L3HYPDH	novel	462	3	NA	NA	-69	0	intron_retention	FALSE	canonical	1	49999	junction_1	100588.35056152129	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	402	902	35.0	1	True	AATAAA	-16
PB.3472.6	chr14	-	4166	4	full-splice_match	L3HYPDH	ENST00000481608.1	758	4	-402	-3006	0	0	multi-exon	FALSE	canonical	1	84705	junction_3	86694.51796970787	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	735	1235	35.0	-1	True	AATAAA	-16
PB.11463.7	chr9	+	2309	9	full-splice_match	SNAPC3	ENST00000380821.7	5680	9	155	3216	-10	-1542	multi-exon	FALSE	canonical	1	307315	junction_6	53110.426759812195	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	22	1257	55.0	-17	True	TTTAAA	-26
PB.7984.10	chr3	-	3184	22	novel_in_catalog	SLC4A7	novel	7970	28	NA	NA	115	-42	combination_of_known_junctions	FALSE	canonical	1	23388	junction_21	61961.31373197546	NA	0	NA	TRUE	NA	NA	NA	C	coding	1026	3078	107	3184	70.0	151	False	NA	NA
PB.7619.2	chr22	+	4154	14	full-splice_match	DGCR8	ENST00000351989.7	4514	14	13	347	13	263	multi-exon	FALSE	canonical	1	59923	junction_1	72885.91872502214	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	474	2738	15.0	4	True	NA	NA
PB.7619.3	chr22	+	2411	1	novel_in_catalog	DGCR8	novel	4514	14	NA	NA	-1458	433	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	228	687	1660	2346	95.0	4083	False	NA	NA
PB.3276.1	chr13	+	3148	1	full-splice_match	GAS6-AS1	ENST00000611082.1	1817	1	-2833	1502	-2833	-1502	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	A	coding	145	438	729	1166	25.0	1697	False	ATTAAA	-17
PB.7619.1	chr22	+	4514	14	full-splice_match	DGCR8	ENST00000351989.7	4514	14	1	-1	1	0	multi-exon	FALSE	canonical	1	59923	junction_1	72885.91872502214	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	486	2750	20.0	-8	True	CATAAA	-16
PB.7146.1	chr20	-	3396	8	novel_in_catalog	DDRGK1	novel	865	2	NA	NA	-2	1562	intron_retention	FALSE	canonical	1	436191	junction_7	275104.1758305907	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	61	957	75.0	-8	True	ATTAAA	-43
PB.8334.20	chr3	-	2996	11	novel_in_catalog	GOLGB1	novel	11187	22	NA	NA	2	-369	combination_of_known_junctions	FALSE	canonical	1	10282	junction_6	68920.96426088364	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2886	110	2995	75.0	2	True	AAGAAA	-38
PB.7994.4	chr3	+	3943	15	novel_in_catalog	STT3B	novel	1888	10	NA	NA	-46	-14	no_combination_of_known_junctions	TRUE	canonical	1	2340	junction_8	479890.977284382	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	1380	2399	25.0	-12	True	AATAAA	-9
PB.7994.5	chr3	+	4018	15	novel_in_catalog	STT3B	novel	1888	10	NA	NA	-20	-2	no_combination_of_known_junctions	FALSE	canonical	1	5539	junction_3	474739.31177477574	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	48	2462	30.0	14	True	AATAAA	-21
PB.10247.2	chr6	+	3219	9	novel_not_in_catalog	VTA1	novel	3177	6	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	298294.99232963583	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	37	960	20.0	-11	True	NA	NA
PB.7994.1	chr3	+	3786	16	full-splice_match	STT3B	ENST00000295770.3	4248	16	459	3	277	-3	multi-exon	FALSE	canonical	1	702074	junction_1	373989.6023333388	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	189	2231	30.0	-1114	False	AATAAA	-20
PB.7994.2	chr3	+	3932	16	full-splice_match	STT3B	ENST00000295770.3	4248	16	180	136	-2	-136	multi-exon	FALSE	canonical	1	702074	junction_1	373989.6023333388	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	30	2510	45.0	-7	True	AATAAA	-19
PB.7994.3	chr3	+	2708	16	full-splice_match	STT3B	ENST00000295770.3	4248	16	155	1385	-27	192	multi-exon	FALSE	canonical	1	702074	junction_1	373989.6023333388	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	55	2535	20.0	7	True	AATAAA	-16
PB.4964.12	chr17	+	1889	12	full-splice_match	CDC6	ENST00000647931.1	2820	12	-4	935	-4	51	multi-exon	FALSE	canonical	1	389641	junction_9	70526.17721394818	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1662	226	1887	30.0	-4	True	GATAAA	-21
PB.11463.3	chr9	+	2916	10	full-splice_match	SNAPC3	ENST00000490969.5	2524	10	-26	-366	-26	366	multi-exon	FALSE	canonical	1	214016	junction_9	70752.56112050722	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	38	1273	45.0	-9066	False	ATTAAA	-17
PB.4964.10	chr17	+	2867	12	novel_in_catalog	CDC6	novel	4810	12	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	6864	junction_1	148078.86132638584	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	268	1950	20.0	-4	True	AATATA	-17
PB.4964.11	chr17	+	2772	12	novel_in_catalog	CDC6	novel	4810	12	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	5636	junction_1	148393.4139313411	NA	1	NA	TRUE	NA	NA	NA	C	coding	560	1683	173	1855	20.0	-4	True	AATATA	-17
PB.9349.11	chr5	-	4077	23	full-splice_match	MCTP1	ENST00000312216.12	2337	23	-163	-1577	0	660	multi-exon	FALSE	canonical	1	40070	junction_16	44679.012082814465	NA	1	NA	TRUE	NA	NA	NA	C	coding	778	2337	164	2500	35.0	-1	True	ATTAAA	-15
PB.11463.2	chr9	+	2684	10	full-splice_match	SNAPC3	ENST00000490969.5	2524	10	-30	-130	-30	130	multi-exon	FALSE	canonical	1	214016	junction_9	70752.56112050722	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	42	1277	25.0	-9070	False	AATGAA	-35
PB.11378.1	chr8	-	984	8	full-splice_match	EEF1D	ENST00000395119.7	1249	8	265	0	0	0	multi-exon	FALSE	canonical	1	658224	junction_7	1087152.7075263707	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	75	920	0.0	0	True	ATTAAA	-14
PB.7065.9	chr2	+	3893	19	novel_not_in_catalog	ARMC9	novel	2300	21	NA	NA	54	6648	any annotated donor/acceptor	FALSE	canonical	1	5229	junction_1	49807.19921279292	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	291	2138	15.0	-4444	False	AATACA	-10
PB.11463.1	chr9	+	2100	10	full-splice_match	SNAPC3	ENST00000490969.5	2524	10	-31	455	-31	-455	multi-exon	TRUE	canonical	1	214016	junction_9	70752.56112050722	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	43	1278	35.0	-9071	False	GATAAA	-35
PB.6981.7	chr2	+	2475	6	full-splice_match	RPE	ENST00000359429.10	2569	6	78	16	0	-16	multi-exon	FALSE	canonical	1	23009	junction_2	56332.29202864019	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	20	706	55.0	0	True	AATAAA	-9
PB.4203.2	chr16	+	2458	6	full-splice_match	ZNF75A	ENST00000498240.6	2546	6	88	0	8	0	multi-exon	FALSE	canonical	1	26601	junction_4	52940.69749597184	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	267	992	20.0	-3	True	AATAAA	-17
PB.6459.3	chr2	-	4642	24	novel_not_in_catalog	FBXO11	novel	572	4	NA	NA	-731	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	139148.08142166678	NA	0	NA	TRUE	NA	NA	NA	B	coding	927	2784	663	3446	30.0	-50	True	AATAAA	-15
PB.4203.1	chr16	+	2597	7	novel_in_catalog	ZNF75A	novel	2546	6	NA	NA	-3	-1	combination_of_known_junctions	TRUE	canonical	1	47180	junction_5	44364.47144957325	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	280	1893	20.0	-16	True	AATAAA	-16
PB.7605.1	chr22	-	1581	9	full-splice_match	SLC25A1	ENST00000215882.9	1648	9	60	7	-31	-7	multi-exon	FALSE	canonical	1	318785	junction_8	418669.149821323	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	98	1033	5.0	-6	True	AATAAA	-15
PB.7605.3	chr22	-	2098	8	novel_in_catalog	SLC25A1	novel	1648	9	NA	NA	-26	-7	intron_retention	FALSE	canonical	1	318785	junction_7	427619.95973422716	NA	3	NA	TRUE	NA	NA	NA	C	coding	230	693	93	785	5.0	-1	True	AATAAA	-15
PB.7605.2	chr22	-	1490	9	full-splice_match	SLC25A1	ENST00000451283.5	1514	9	35	-11	-6	-7	multi-exon	FALSE	canonical	1	77479	junction_8	476301.1529355502	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	316	942	5.0	18	True	AATAAA	-15
PB.1505.1	chr10	-	1614	2	full-splice_match	CERNA2	ENST00000647830.1	1874	2	258	2	258	-2	multi-exon	FALSE	canonical	1	57317	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3	True	NA	NA
PB.1505.2	chr10	-	3704	1	novel_in_catalog	CERNA2	novel	1874	2	NA	NA	0	-1162	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	NA	NA
PB.1505.3	chr10	-	2721	1	genic	CERNA2	novel	NA	NA	NA	NA	-67	-2212	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-69	False	NA	NA
PB.312.5	chr1	-	2556	17	novel_not_in_catalog	PABPC4	novel	633	2	NA	NA	2	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	625052.9721940449	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	260	2242	25.0	157	False	AATAAA	-15
PB.6613.6	chr2	-	4137	17	novel_not_in_catalog	EIF2AK3	novel	4222	17	NA	NA	10439	0	intron_retention	FALSE	canonical	1	205	junction_16	59521.905878706486	NA	1	NA	TRUE	NA	NA	NA	C	coding	965	2898	247	3144	25.0	-477	False	AATAAA	-15
PB.6613.5	chr2	-	4481	17	novel_not_in_catalog	EIF2AK3	novel	4222	17	NA	NA	121	0	intron_retention	FALSE	canonical	1	11893	junction_13	59081.72872885359	NA	0	NA	TRUE	NA	NA	NA	C	coding	811	2436	1053	3488	25.0	0	True	AATAAA	-15
PB.6613.4	chr2	-	4486	17	novel_not_in_catalog	EIF2AK3	novel	4222	17	NA	NA	114	0	intron_retention	FALSE	canonical	1	2360	junction_3	59149.14944496244	NA	0	NA	TRUE	NA	NA	NA	C	coding	996	2991	189	3179	25.0	-7	True	AATAAA	-15
PB.6613.3	chr2	-	4492	17	full-splice_match	EIF2AK3	ENST00000303236.7	4646	17	154	0	154	0	multi-exon	FALSE	canonical	1	113466	junction_16	43341.540080648956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	149	3499	25.0	33	True	AATAAA	-15
PB.6613.2	chr2	-	4732	18	novel_not_in_catalog	EIF2AK3	novel	4222	17	NA	NA	110	0	intron_retention	FALSE	canonical	1	12043	junction_15	66931.73404742444	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	1073	3739	25.0	-11	True	AATAAA	-15
PB.3248.1	chr13	+	3767	15	full-splice_match	ERCC5	ENST00000355739.8	5082	15	1307	8	39	-8	multi-exon	FALSE	non_canonical	0	0	junction_13	106900.84661777446	NA	4	NA	TRUE	NA	NA	NA	C	coding	1186	3561	117	3677	10.0	35	False	AATAAA	-18
PB.3248.2	chr13	+	4314	14	novel_in_catalog	BIVM-ERCC5	novel	5632	25	NA	NA	29537	6	intron_retention	TRUE	non_canonical	0	0	junction_12	110900.22438428702	NA	2	NA	TRUE	NA	NA	NA	B	coding	1114	3345	873	4217	20.0	-18	True	AATAAA	-25
PB.3248.3	chr13	+	3833	15	novel_not_in_catalog	BIVM-ERCC5	novel	5632	25	NA	NA	29543	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	126798.72198756016	NA	0	NA	TRUE	NA	NA	NA	B	coding	839	2520	1222	3741	10.0	-12	True	AATAAA	-20
PB.3248.4	chr13	+	4646	13	novel_in_catalog	BIVM-ERCC5	novel	5632	25	NA	NA	29548	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	114982.57363868837	NA	1	NA	TRUE	NA	NA	NA	B	coding	664	1995	862	2856	10.0	-7	True	AATAAA	-18
PB.3248.5	chr13	+	4224	14	novel_in_catalog	BIVM-ERCC5	novel	5632	25	NA	NA	29555	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	110491.06457042274	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	224	2434	10.0	0	True	AATAAA	-18
PB.3248.6	chr13	+	4274	14	novel_not_in_catalog	BIVM-ERCC5	novel	5632	25	NA	NA	29556	1	intron_retention	FALSE	non_canonical	0	0	junction_12	131047.7147360398	NA	2	NA	TRUE	NA	NA	NA	B	coding	666	2001	854	2854	10.0	1	True	AATAAA	-20
PB.3248.7	chr13	+	3373	15	full-splice_match	ERCC5	ENST00000355739.8	5082	15	1202	507	-3	-398	multi-exon	FALSE	non_canonical	0	0	junction_13	106900.84661777446	NA	0	NA	TRUE	NA	NA	NA	C	coding	1050	3150	222	3371	65.0	2	True	NA	NA
PB.2954.2	chr12	+	2203	2	full-splice_match	DYNLL1	ENST00000548214.1	616	2	10	-1597	1	0	multi-exon	FALSE	canonical	1	3570861	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	11	True	AATAAA	-16
PB.2954.1	chr12	+	2432	1	full-splice_match	DYNLL1	ENST00000552316.1	670	1	-1764	2	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2237	False	AATAAA	-14
PB.4053.13	chr15	+	1929	14	novel_in_catalog	AKAP13	novel	13215	37	NA	NA	60	7	combination_of_known_junctions	FALSE	canonical	1	18197	junction_3	156758.20579599237	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1827	102	1928	55.0	-4	True	NA	NA
PB.7146.2	chr20	-	2870	9	full-splice_match	DDRGK1	ENST00000354488.7	1306	9	-2	-1562	-2	1562	multi-exon	FALSE	canonical	1	436191	junction_8	272254.4854955332	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	61	1005	75.0	-8	True	ATTAAA	-43
PB.3428.23	chr14	-	4321	28	novel_in_catalog	NIN	novel	10293	31	NA	NA	-38	3	no_combination_of_known_junctions	FALSE	canonical	1	29391	junction_15	106621.70438167723	NA	0	NA	TRUE	NA	NA	NA	C	coding	1347	4044	230	4273	30.0	2	True	AATAAA	-23
PB.3428.22	chr14	-	4335	28	novel_in_catalog	NIN	novel	10293	31	NA	NA	-16	3	no_combination_of_known_junctions	FALSE	canonical	1	1990	junction_27	90230.88729596278	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	154	4287	30.0	24	True	AATAAA	-23
PB.3428.21	chr14	-	4436	29	full-splice_match	NIN	ENST00000324330.13	4364	29	-64	-8	-64	2	multi-exon	FALSE	canonical	1	48689	junction_28	92407.60416442018	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	256	4389	30.0	1828	False	AATAAA	-22
PB.3428.20	chr14	-	6255	29	full-splice_match	NIN	ENST00000324330.13	4364	29	-40	-1851	-40	-564	multi-exon	FALSE	canonical	1	48689	junction_28	92407.60416442018	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	232	4365	70.0	0	True	TATAAA	-17
PB.3428.27	chr14	-	4692	29	novel_in_catalog	NIN	novel	10293	31	NA	NA	-41	2	combination_of_known_junctions	FALSE	canonical	1	48689	junction_28	103455.17078317307	NA	0	NA	TRUE	NA	NA	NA	C	coding	1333	4002	233	4234	5.0	-1	True	AATAAA	-19
PB.5131.3	chr17	+	3103	11	full-splice_match	AKAP1	ENST00000337714.7	3970	11	88	779	88	0	multi-exon	FALSE	canonical	1	60999	junction_1	187197.79367300245	NA	1	NA	TRUE	NA	NA	NA	C	coding	903	2712	146	2857	90.0	-1	True	NA	NA
PB.3428.24	chr14	-	6561	30	full-splice_match	NIN	ENST00000382041.7	6496	30	-50	-15	-50	2	multi-exon	FALSE	canonical	1	48689	junction_29	100775.75117781576	NA	2	NA	TRUE	NA	NA	NA	C	coding	2090	6273	242	6514	30.0	1842	False	AATAAA	-22
PB.1466.8	chr10	-	2638	1	novel_in_catalog	ECD	novel	3069	14	NA	NA	52	-8781	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.1466.9	chr10	-	1898	1	novel_in_catalog	ECD	novel	2084	13	NA	NA	2	-9583	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1	True	NA	NA
PB.4053.10	chr15	+	1533	10	novel_in_catalog	AKAP13	novel	5459	15	NA	NA	-33	-6	combination_of_known_junctions	FALSE	canonical	1	16470	junction_1	99751.2969578112	NA	12	1	TRUE	NA	NA	NA	C	coding	414	1242	291	1532	30.0	0	True	AATAAA	-20
PB.9307.1	chr5	-	573	4	full-splice_match	TBCA	ENST00000380377.8	683	4	28	82	28	0	multi-exon	FALSE	canonical	1	470266	junction_1	230459.44209050466	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	77	403	40.0	3	True	AATAAA	-12
PB.1466.1	chr10	-	2397	15	novel_in_catalog	ECD	novel	457	2	NA	NA	29	-1	combination_of_known_junctions	TRUE	canonical	1	1853	junction_1	115649.20342493254	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	179	2203	80.0	-23	True	AATATA	-14
PB.1466.2	chr10	-	3004	14	full-splice_match	ECD	ENST00000372979.8	3069	14	41	24	41	-24	multi-exon	FALSE	canonical	1	273167	junction_13	63244.85028155332	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	167	2101	50.0	-11	True	AATAAA	-39
PB.1466.3	chr10	-	2986	14	full-splice_match	ECD	ENST00000372979.8	3069	14	-30	113	6	-113	multi-exon	FALSE	canonical	1	273167	junction_13	63244.85028155332	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	238	2172	30.0	230	False	AATATA	-20
PB.1466.4	chr10	-	2150	14	full-splice_match	ECD	ENST00000372979.8	3069	14	51	868	51	0	multi-exon	FALSE	canonical	1	273167	junction_13	63244.85028155332	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	157	2091	25.0	-1	True	AATAAA	-22
PB.1466.5	chr10	-	2353	15	novel_not_in_catalog	ECD	novel	457	2	NA	NA	39	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	145794.3824068958	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	1498	2295	25.0	-13	True	AATAAA	-21
PB.1466.6	chr10	-	1931	13	novel_in_catalog	ECD	novel	457	2	NA	NA	51	-1	combination_of_known_junctions	FALSE	canonical	1	10173	junction_12	120350.15722682224	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	161	1873	25.0	-1	True	AATAAA	-21
PB.1466.7	chr10	-	2286	14	novel_not_in_catalog	ECD	novel	457	2	NA	NA	41	-2	any annotated donor/acceptor	FALSE	canonical	1	315	junction_11	120265.98763052488	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	589	2229	25.0	-11	True	AATAAA	-20
PB.8021.8	chr3	+	3665	19	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	0	-10384	any annotated donor/acceptor	TRUE	canonical	1	2890	junction_9	21685.531176012326	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	72	851	70.0	-10	True	NA	NA
PB.4053.14	chr15	+	4026	22	novel_in_catalog	AKAP13	novel	13215	37	NA	NA	64	-226	combination_of_known_junctions	FALSE	canonical	1	60823	junction_1	110088.37442258289	NA	2	NA	TRUE	NA	NA	NA	C	coding	1073	3222	98	3319	15.0	0	True	TATAAA	-17
PB.12066.3	chrX	+	2735	6	full-splice_match	SUV39H1	ENST00000376687.3	2871	6	134	2	134	0	multi-exon	FALSE	canonical	1	80056	junction_1	35843.01252629304	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	57	1295	45.0	-32	True	AATAAA	-16
PB.12066.2	chrX	+	3546	5	incomplete-splice_match	SUV39H1	ENST00000376687.3	2871	6	132	2	132	0	intron_retention	FALSE	canonical	1	80056	junction_1	39411.192233298396	NA	4	NA	TRUE	NA	NA	NA	C	coding	456	1371	59	1429	45.0	-34	True	AATAAA	-16
PB.12066.1	chrX	+	2545	7	novel_not_in_catalog	SUV39H1	novel	2978	6	NA	NA	129	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	60507.01600090136	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	62	1300	45.0	-37	True	AATAAA	-16
PB.6603.1	chr2	-	8263	34	full-splice_match	POLR1A	ENST00000263857.10	12749	34	254	4232	-15	1880	multi-exon	FALSE	canonical	1	86111	junction_6	42284.54347447554	NA	0	NA	TRUE	NA	NA	NA	C	coding	1720	5163	126	5288	15.0	225	False	NA	NA
PB.6603.2	chr2	-	6617	34	full-splice_match	POLR1A	ENST00000263857.10	12749	34	15	6117	15	-5	multi-exon	FALSE	canonical	1	86111	junction_6	42284.54347447554	NA	2	1	TRUE	NA	NA	NA	C	coding	1720	5163	365	5527	20.0	-14	True	AAGAAA	-21
PB.6603.6	chr2	-	3330	23	incomplete-splice_match	POLR1A	ENST00000409681.1	6454	34	265	16787	-4	-3790	3prime_fragment	FALSE	canonical	1	113851	junction_20	30277.08235821333	NA	1	1	TRUE	NA	NA	NA	C	coding	1072	3216	115	3330	60.0	-16	True	AAAAAG	-24
PB.6603.7	chr2	-	2423	9	incomplete-splice_match	POLR1A	ENST00000486964.5	1427	10	-7	1542	-6	-1542	3prime_fragment	FALSE	canonical	1	113851	junction_6	27371.518933635653	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	105	1217	70.0	-6	True	NA	NA
PB.3074.3	chr13	+	1935	3	full-splice_match	POLR1D	ENST00000645412.1	1919	3	-17	1	0	0	multi-exon	FALSE	canonical	1	708644	junction_1	16173.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	110	478	20.0	-17	True	AATAAA	-14
PB.3074.2	chr13	+	1616	3	novel_in_catalog	POLR1D	novel	624	2	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	1	100381	junction_1	480545.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	133	402	1019	1420	25.0	0	True	NA	NA
PB.3074.1	chr13	+	2203	3	full-splice_match	POLR1D	ENST00000621089.2	1606	3	-204	-393	0	0	multi-exon	FALSE	canonical	1	9534	junction_1	365728.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-27	True	AATAAA	-19
PB.7491.3	chr21	-	1365	8	novel_not_in_catalog	AP000275.2	novel	891	8	NA	NA	-305	-22851	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	356231.46410542383	NA	1	1	TRUE	NA	NA	NA	B	coding	290	873	304	1176	45.0	-1	True	AATAAA	-12
PB.7491.4	chr21	-	3328	4	novel_in_catalog	AP000275.2	novel	891	8	NA	NA	-305	-22851	intron_retention	FALSE	canonical	1	632855	junction_3	72705.8296852613	NA	0	NA	TRUE	NA	NA	NA	B	coding	182	549	344	892	45.0	-1	True	AATAAA	-12
PB.7491.5	chr21	-	2282	5	full-splice_match	CFAP298	ENST00000382549.8	2503	5	214	7	-20	-7	multi-exon	FALSE	canonical	1	632855	junction_4	160287.09343764238	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	130	867	45.0	-1	True	AATAAA	-12
PB.7491.6	chr21	-	2454	6	novel_not_in_catalog	AP000275.2	novel	891	8	NA	NA	-303	-22851	intron_retention	FALSE	non_canonical	0	0	junction_5	351172.44315042713	NA	2	1	TRUE	NA	NA	NA	B	coding	245	738	302	1039	45.0	1	True	AATAAA	-12
PB.7491.7	chr21	-	2196	6	novel_in_catalog	AP000275.2	novel	891	8	NA	NA	-305	-22853	intron_retention	FALSE	canonical	1	632855	junction_5	175533.44483989367	NA	3	NA	TRUE	NA	NA	NA	B	coding	245	738	344	1081	50.0	-1	True	AATAAA	-10
PB.5752.2	chr19	-	2307	8	novel_in_catalog	AC010422.8	novel	5025	14	NA	NA	-44	-7647	intron_retention	FALSE	canonical	1	838450	junction_7	94291.20440379562	NA	0	NA	TRUE	NA	NA	NA	B	coding	319	960	113	1072	5.0	-2	True	NA	NA
PB.2760.9	chr12	-	1571	5	incomplete-splice_match	ZFC3H1	ENST00000552994.5	7597	34	-31	34569	8	647	3prime_fragment	FALSE	canonical	1	103358	junction_4	72528.71179574335	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1329	241	1569	60.0	-4	True	AAGAAA	-9
PB.6184.2	chr19	+	4095	8	novel_in_catalog	ZNF528	novel	4209	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	12299	junction_5	32685.89561887762	NA	0	NA	TRUE	NA	NA	NA	B	coding	618	1857	575	2431	25.0	18	True	AATAAA	-19
PB.5752.1	chr19	-	2390	7	novel_in_catalog	AC010422.8	novel	5025	14	NA	NA	-48	-7647	intron_retention	FALSE	canonical	1	838450	junction_6	98479.08403437758	NA	1	1	TRUE	NA	NA	NA	B	coding	280	843	117	959	5.0	-6	True	NA	NA
PB.5752.6	chr19	-	2545	7	novel_in_catalog	AC010422.8	novel	5025	14	NA	NA	-48	-7651	intron_retention	FALSE	canonical	1	838450	junction_6	100168.50047697408	NA	0	NA	TRUE	NA	NA	NA	B	coding	136	411	904	1314	5.0	-6	True	NA	NA
PB.1772.1	chr11	-	1295	2	full-splice_match	RHOG	ENST00000351018.4	1319	2	24	0	24	0	multi-exon	FALSE	canonical	1	962011	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	191	576	135	710	0.0	-6	True	AATAAA	-18
PB.5752.4	chr19	-	2361	7	novel_in_catalog	AC010422.8	novel	5025	14	NA	NA	-31	-7650	intron_retention	FALSE	canonical	1	15742	junction_2	468286.4659231629	NA	0	NA	TRUE	NA	NA	NA	B	coding	132	399	100	498	5.0	11	True	NA	NA
PB.5752.5	chr19	-	2700	5	novel_in_catalog	AC010422.8	novel	5025	14	NA	NA	-45	-7651	intron_retention	FALSE	canonical	1	838450	junction_4	118953.58019622612	NA	0	NA	TRUE	NA	NA	NA	B	coding	128	387	114	500	5.0	-3	True	NA	NA
PB.2760.1	chr12	-	6851	35	full-splice_match	ZFC3H1	ENST00000378743.7	7285	35	133	301	-12	-75	multi-exon	FALSE	canonical	1	103358	junction_34	38714.51213938142	NA	1	NA	TRUE	NA	NA	NA	C	coding	1989	5970	227	6196	45.0	10	True	ATTAAA	-29
PB.12098.1	chrX	-	4698	13	full-splice_match	ITIH6	ENST00000218436.6	4968	13	-15	285	-15	-285	multi-exon	TRUE	canonical	1	1206	junction_12	788.2453219017541	NA	1	NA	TRUE	NA	NA	NA	A	coding	1313	3942	46	3987	60.0	-1	True	NA	NA
PB.11862.8	chr9	+	2642	17	novel_in_catalog	POMT1	novel	2821	18	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	3459	junction_2	93897.75709213503	NA	26	3	TRUE	NA	NA	NA	C	coding	573	1722	230	1951	5.0	-19	True	ATTAAA	-15
PB.9315.13	chr5	+	2422	15	novel_in_catalog	TENT2	novel	781	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	151184	junction_6	88820.16045013517	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	673	2115	35.0	0	True	AATAAA	-20
PB.11862.9	chr9	+	3139	20	novel_not_in_catalog	POMT1	novel	2821	18	NA	NA	3	-2	intron_retention	FALSE	canonical	1	18554	junction_19	85441.81743695968	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	1265	2617	15.0	-16	True	ATTAAA	-22
PB.5775.3	chr19	+	3149	21	novel_not_in_catalog	CC2D1A	novel	3581	29	NA	NA	9	230	intron_retention	FALSE	canonical	1	74174	junction_12	80446.32055406574	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	231	2447	90.0	11	True	NA	NA
PB.5775.2	chr19	+	2635	11	incomplete-splice_match	CC2D1A	ENST00000318003.11	3581	29	0	10505	0	-7	intron_retention	FALSE	canonical	1	128392	junction_1	56360.16236882218	NA	2	NA	TRUE	NA	NA	NA	C	coding	500	1503	242	1744	95.0	0	True	NA	NA
PB.5775.1	chr19	+	3584	29	novel_not_in_catalog	CC2D1A	novel	3581	29	NA	NA	-14	1	any annotated donor/acceptor	TRUE	canonical	1	74174	junction_12	75197.60953372609	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	256	3099	5.0	-130	False	AATAAA	-21
PB.5775.6	chr19	+	3145	21	incomplete-splice_match	CC2D1A	ENST00000589606.5	3117	29	-216	2878	23	228	intron_retention	FALSE	canonical	1	127515	junction_12	75125.73940441452	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	217	2445	85.0	25	True	NA	NA
PB.5775.5	chr19	+	3495	29	full-splice_match	CC2D1A	ENST00000318003.11	3581	29	90	-4	88	4	multi-exon	FALSE	canonical	1	127515	junction_12	70790.17120792042	NA	1	NA	TRUE	NA	NA	NA	C	coding	951	2856	152	3007	5.0	17	True	AATAAA	-24
PB.5775.4	chr19	+	2510	11	incomplete-splice_match	CC2D1A	ENST00000589606.5	3117	29	-230	10399	9	-121	intron_retention	FALSE	canonical	1	128392	junction_1	56360.16236882218	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	231	1733	70.0	11	True	NA	NA
PB.4622.15	chr16	+	2405	10	novel_in_catalog	CDK10	novel	3344	12	NA	NA	3	0	intron_retention	FALSE	canonical	1	96295	junction_1	150496.35750778523	NA	10	NA	TRUE	NA	NA	NA	C	coding	194	585	17	601	20.0	4	True	GATAAA	-15
PB.4622.14	chr16	+	1985	14	novel_in_catalog	CDK10	novel	3344	12	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	10295	junction_1	180849.96990784555	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	459	1328	30.0	2	True	GATAAA	-11
PB.4622.16	chr16	+	1980	12	novel_in_catalog	CDK10	novel	3344	12	NA	NA	3	-5	intron_retention	FALSE	canonical	1	9614	junction_2	194429.80076879097	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	824	1324	35.0	4	True	GATAAA	-10
PB.4622.11	chr16	+	3126	10	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	9614	junction_2	214896.1272531338	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	388	759	20.0	0	True	GATAAA	-15
PB.4622.10	chr16	+	1767	13	full-splice_match	CDK10	ENST00000353379.11	1798	13	22	9	0	1	multi-exon	FALSE	canonical	1	96295	junction_1	140145.03496940728	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	22	1104	25.0	-1	True	GATAAA	-17
PB.4622.13	chr16	+	1726	13	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	108620	junction_1	137828.2334317489	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	196	1065	20.0	0	True	GATAAA	-15
PB.4622.12	chr16	+	2123	11	novel_in_catalog	CDK10	novel	3344	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	67658	junction_1	154178.57651126504	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	161	619	20.0	0	True	GATAAA	-15
PB.996.2	chr1	+	3170	16	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-184	212777	-184	27	3prime_fragment	FALSE	canonical	1	26732	junction_1	3520.200219053204	NA	0	NA	TRUE	NA	NA	NA	C	coding	882	2649	414	3062	40.0	-4	True	CATAAA	-18
PB.3294.9	chr14	+	2933	10	full-splice_match	METTL17	ENST00000555640.6	2887	10	-8	-38	-1	-2	multi-exon	FALSE	canonical	1	210063	junction_3	198740.06671249983	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	18	494	20.0	6	True	AATAAA	-22
PB.3294.8	chr14	+	1531	14	full-splice_match	METTL17	ENST00000339374.10	1749	14	216	2	-1	-2	multi-exon	FALSE	canonical	1	333478	junction_1	172383.37217939793	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	18	1388	20.0	6	True	AATAAA	-22
PB.4467.21	chr16	-	7928	49	full-splice_match	CNOT1	ENST00000317147.9	8471	49	43	500	4	233	multi-exon	FALSE	canonical	1	316180	junction_48	267800.25197142427	NA	6	1	TRUE	NA	NA	NA	C	coding	2376	7131	291	7421	35.0	-18	True	ATTAAA	-17
PB.3294.6	chr14	+	2088	12	novel_in_catalog	METTL17	novel	1749	14	NA	NA	1	-2	intron_retention	FALSE	canonical	1	210063	junction_3	191973.32293901654	NA	2	NA	TRUE	NA	NA	NA	C	coding	136	411	529	939	20.0	1	True	AATAAA	-22
PB.4467.23	chr16	-	7688	49	full-splice_match	CNOT1	ENST00000317147.9	8471	49	50	733	-2	0	multi-exon	FALSE	canonical	1	316180	junction_48	267800.25197142427	NA	0	NA	TRUE	NA	NA	NA	C	coding	2376	7131	284	7414	20.0	-11	True	AATACA	-24
PB.4467.22	chr16	-	7828	50	novel_not_in_catalog	CNOT1	novel	8471	49	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_30	317207.4269050775	NA	0	NA	TRUE	NA	NA	NA	C	coding	1513	4542	3013	7554	20.0	-19	True	AATACA	-24
PB.2753.21	chr12	+	1866	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	62	4688	-1	97	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	49	1704	30.0	0	True	AATAAA	-20
PB.2753.20	chr12	+	5871	10	full-splice_match	CPSF6	ENST00000435070.6	6616	10	56	689	-7	-499	multi-exon	FALSE	canonical	1	254732	junction_2	236165.71916540634	NA	3	NA	TRUE	NA	NA	NA	C	coding	551	1656	55	1710	45.0	-6	True	NA	NA
PB.2753.23	chr12	+	2244	11	full-splice_match	CPSF6	ENST00000266679.8	2229	11	-15	0	1	0	multi-exon	FALSE	canonical	1	88153	junction_5	351623.03070886864	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	47	1813	25.0	2	True	AATAAA	-14
PB.2753.22	chr12	+	2431	11	full-splice_match	CPSF6	ENST00000266679.8	2229	11	-15	-187	1	187	multi-exon	FALSE	canonical	1	88153	junction_5	351623.03070886864	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	47	1813	15.0	2	True	ATTAAA	-18
PB.7681.6	chr22	-	2766	5	intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	13630	junction_2	34081.86837143028	NA	4	NA	FALSE	NA	NA	NA	A	coding	99	300	979	1278	0.0	-9	True	NA	NA
PB.10986.29	chr8	-	2293	11	full-splice_match	CTSB	ENST00000533455.5	2009	11	17	-301	0	-1	multi-exon	FALSE	canonical	1	244599	junction_9	2028350.7039420477	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	203	1222	5.0	-3	True	AAAACA	-13
PB.996.1	chr1	+	7860	41	novel_not_in_catalog	HMCN1	novel	18208	107	NA	NA	-206	51907	any annotated donor/acceptor	FALSE	canonical	1	2566	junction_40	6207.7042152775775	NA	1	NA	TRUE	NA	NA	NA	C	coding	2126	6381	436	6816	30.0	-6	True	AATAAA	-25
PB.10986.28	chr8	-	2342	11	novel_in_catalog	CTSB	novel	660	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	8980	junction_10	2084761.4150948904	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	252	1271	5.0	-32	False	AAAACA	-13
PB.996.6	chr1	+	5378	1	genic	HMCN1	novel	NA	NA	NA	NA	-180	-238397	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	1	312	80.0	0	True	NA	NA
PB.10480.1	chr7	+	3027	1	intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	3230	False	NA	NA
PB.996.7	chr1	+	4033	23	incomplete-splice_match	HMCN1	ENST00000271588.8	18208	107	-176	197517	-176	-5	3prime_fragment	FALSE	canonical	1	22219	junction_18	4394.871266413512	NA	0	NA	TRUE	NA	NA	NA	C	coding	1171	3516	406	3921	35.0	4	True	ATTAAA	-14
PB.3049.7	chr13	-	2351	9	novel_in_catalog	SKA3	novel	2745	8	NA	NA	-18	540	combination_of_known_junctions	FALSE	canonical	1	7779	junction_8	59089.61487951478	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	240	1358	55.0	-23	True	NA	NA
PB.3049.6	chr13	-	2454	8	full-splice_match	SKA3	ENST00000400018.7	2745	8	-31	322	24	-322	multi-exon	FALSE	canonical	1	22370	junction_1	52727.321480714454	NA	3	NA	TRUE	NA	NA	NA	C	coding	388	1167	102	1268	25.0	-32	True	AATAAA	-5
PB.3049.5	chr13	-	2599	9	novel_in_catalog	SKA3	novel	2745	8	NA	NA	-17	-313	combination_of_known_junctions	FALSE	canonical	1	7779	junction_8	59089.61487951478	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	239	1357	25.0	-22	True	AATAAA	-14
PB.3049.4	chr13	-	2590	9	full-splice_match	SKA3	ENST00000314759.5	2919	9	17	312	17	-312	multi-exon	FALSE	canonical	1	67461	junction_8	42278.80510503313	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	109	1347	30.0	-39	True	AATAAA	-15
PB.3049.3	chr13	-	2839	8	full-splice_match	SKA3	ENST00000298260.8	2803	8	-37	1	17	-1	multi-exon	FALSE	canonical	1	14289	junction_7	61112.000036066274	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	293	1285	20.0	-39	True	NA	NA
PB.3049.2	chr13	-	2779	8	full-splice_match	SKA3	ENST00000400018.7	2745	8	-34	0	21	0	multi-exon	FALSE	canonical	1	22370	junction_1	52727.321480714454	NA	4	1	TRUE	NA	NA	NA	C	coding	388	1167	105	1271	15.0	-35	True	NA	NA
PB.3049.1	chr13	-	2879	9	full-splice_match	SKA3	ENST00000314759.5	2919	9	41	-1	-10	1	multi-exon	FALSE	canonical	1	67461	junction_8	42278.80510503313	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	85	1323	15.0	-15	True	NA	NA
PB.8124.1	chr3	-	2232	14	novel_in_catalog	TRAIP	novel	2028	15	NA	NA	0	-6	intron_retention	FALSE	canonical	1	77548	junction_13	14254.860442968944	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	115	1434	85.0	-5	True	NA	NA
PB.996.5	chr1	+	2654	1	genic	HMCN1	novel	NA	NA	NA	NA	-180	-241121	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	103	312	1	312	40.0	0	True	AATAAA	-17
PB.1120.6	chr1	-	4456	19	full-splice_match	PTPN14	ENST00000366956.9	12985	19	-437	8966	-58	89	multi-exon	FALSE	canonical	1	73063	junction_18	28250.31261883182	NA	1	NA	TRUE	NA	NA	NA	C	coding	1187	3564	633	4196	20.0	-4	True	AATATA	-21
PB.3049.9	chr13	-	2277	8	full-splice_match	SKA3	ENST00000298260.8	2803	8	-36	562	18	540	multi-exon	FALSE	canonical	1	14289	junction_7	61112.000036066274	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	292	1284	55.0	-38	True	NA	NA
PB.3049.8	chr13	-	2323	9	full-splice_match	SKA3	ENST00000314759.5	2919	9	34	562	-17	540	multi-exon	FALSE	canonical	1	67461	junction_8	42278.80510503313	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	92	1330	55.0	-22	True	NA	NA
PB.860.13	chr1	+	2934	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-17	-228	1	228	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	55	1062	70.0	1	True	NA	NA
PB.8124.3	chr3	-	1998	15	full-splice_match	TRAIP	ENST00000331456.6	2028	15	2	28	-1	-6	multi-exon	FALSE	canonical	1	77548	junction_14	15328.66781290427	NA	0	NA	TRUE	NA	NA	NA	C	coding	469	1410	113	1522	85.0	-3	True	NA	NA
PB.9996.8	chr6	-	5496	26	novel_not_in_catalog	CUL7	novel	5254	26	NA	NA	109	0	any annotated donor/acceptor	FALSE	canonical	1	24497	junction_2	76748.5670333981	NA	0	NA	TRUE	NA	NA	NA	C	coding	1734	5205	224	5428	15.0	14	True	AATAAA	-17
PB.9996.9	chr6	-	5320	26	novel_not_in_catalog	CUL7	novel	5254	26	NA	NA	-62	-5	any annotated donor/acceptor	FALSE	canonical	1	24497	junction_2	69003.90478836396	NA	20	1	TRUE	NA	NA	NA	C	coding	1702	5109	149	5257	20.0	5699	False	AATAAA	-12
PB.1611.29	chr10	-	3758	15	novel_in_catalog	OGA	novel	5155	16	NA	NA	-23	338	combination_of_known_junctions	FALSE	canonical	1	11336	junction_10	255971.0902903462	NA	1	1	TRUE	NA	NA	NA	C	coding	883	2652	420	3071	15.0	0	True	TATAAA	-14
PB.1611.28	chr10	-	3824	16	novel_in_catalog	OGA	novel	5155	16	NA	NA	16	339	combination_of_known_junctions	FALSE	canonical	1	16864	junction_5	255453.4315802132	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	428	3136	15.0	-8	True	TATAAA	-15
PB.1611.27	chr10	-	3891	16	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	21	339	any annotated donor/acceptor	FALSE	canonical	1	1848	junction_2	333812.9701666289	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	423	2423	15.0	-3	True	TATAAA	-15
PB.1611.26	chr10	-	3867	16	full-splice_match	OGA	ENST00000361464.7	5155	16	-30	1318	17	341	multi-exon	FALSE	canonical	1	409086	junction_15	189164.53566581188	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2751	427	3177	10.0	-7	True	TATAAA	-17
PB.9996.6	chr6	-	5411	26	full-splice_match	CUL7	ENST00000535468.1	5504	26	94	-1	94	1	multi-exon	FALSE	canonical	1	18420	junction_25	75071.34738382148	NA	0	NA	TRUE	NA	NA	NA	C	coding	1730	5193	150	5342	10.0	-1	True	AATAAA	-18
PB.1611.24	chr10	-	4893	14	novel_in_catalog	OGA	novel	5155	16	NA	NA	21	-9	combination_of_known_junctions	FALSE	canonical	1	15101	junction_2	272673.965010386	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	423	2894	15.0	-3	True	AATAAA	-11
PB.1611.23	chr10	-	7452	16	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	-23	-9	any annotated donor/acceptor	FALSE	canonical	1	6166	junction_2	256579.05723052818	NA	3	NA	TRUE	NA	NA	NA	C	coding	832	2499	420	2918	15.0	0	True	AATAAA	-11
PB.1611.22	chr10	-	5016	15	full-splice_match	OGA	ENST00000439817.5	5043	15	18	9	18	-9	multi-exon	FALSE	canonical	1	10231	junction_8	224940.21919530674	NA	0	NA	TRUE	NA	NA	NA	C	coding	863	2592	426	3017	15.0	-6	True	AATAAA	-11
PB.1611.21	chr10	-	5109	17	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	-23	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	250426.38617987	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2751	360	3110	15.0	0	True	AATAAA	-11
PB.9996.3	chr6	-	5510	26	novel_in_catalog	CUL7	novel	5254	26	NA	NA	85	-1	combination_of_known_junctions	FALSE	canonical	1	46814	junction_24	66704.84770838174	NA	1	NA	TRUE	NA	NA	NA	C	coding	1730	5193	248	5440	15.0	-10	True	AATAAA	-19
PB.4995.12	chr17	+	3597	5	novel_in_catalog	COASY	novel	574	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	814507	junction_4	100030.63581223505	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	471	1178	5.0	2	True	ATTAAA	-17
PB.4995.13	chr17	+	3471	6	novel_in_catalog	COASY	novel	574	2	NA	NA	2	1	intron_retention	FALSE	canonical	1	550851	junction_1	150572.00565098415	NA	5	NA	TRUE	NA	NA	NA	C	coding	306	921	1994	2914	10.0	2	True	ATTAAA	-16
PB.4995.10	chr17	+	2339	10	novel_in_catalog	COASY	novel	574	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	18099	junction_1	288242.11895711714	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	337	2031	10.0	0	True	ATTAAA	-16
PB.4995.11	chr17	+	2215	11	full-splice_match	COASY	ENST00000590958.5	1976	11	0	-239	0	1	multi-exon	FALSE	canonical	1	18099	junction_1	341733.76362039504	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	213	1907	10.0	0	True	ATTAAA	-16
PB.4995.16	chr17	+	2205	7	novel_in_catalog	COASY	novel	574	2	NA	NA	-1	1	intron_retention	FALSE	canonical	1	24992	junction_3	336500.8184585143	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	458	1897	10.0	15	True	ATTAAA	-16
PB.7254.2	chr20	+	2978	19	novel_not_in_catalog	ACSS2	novel	455	2	NA	NA	-25	-5	any annotated donor/acceptor	FALSE	canonical	1	24376	junction_14	135109.70417044326	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	100	2235	25.0	-8	True	AATAAA	-13
PB.4995.14	chr17	+	2473	9	full-splice_match	COASY	ENST00000393818.2	2458	9	-14	-1	2	1	multi-exon	FALSE	canonical	1	550851	junction_3	165757.81139469528	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	471	2165	10.0	2	True	ATTAAA	-16
PB.4995.15	chr17	+	2283	8	novel_in_catalog	COASY	novel	574	2	NA	NA	2	1	intron_retention	FALSE	canonical	1	28022	junction_3	313871.35675187904	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	471	1559	10.0	2	True	ATTAAA	-16
PB.5761.4	chr19	+	2089	11	novel_in_catalog	GCDH	novel	1956	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	127320	junction_1	98122.87264364003	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	72	1157	20.0	6	True	AATAAA	-15
PB.5761.5	chr19	+	1815	12	full-splice_match	GCDH	ENST00000222214.9	1956	12	140	1	0	-1	multi-exon	FALSE	canonical	1	127320	junction_1	93736.08366556968	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	72	1388	20.0	6	True	AATAAA	-15
PB.5761.6	chr19	+	2141	5	full-splice_match	GCDH	ENST00000590627.5	1051	5	-11	-1079	1	1031	multi-exon	FALSE	canonical	1	127320	junction_1	122884.11278797394	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	614	988	80.0	9	True	NA	NA
PB.5761.1	chr19	+	2160	11	novel_in_catalog	GCDH	novel	1956	12	NA	NA	-29	1	intron_retention	FALSE	canonical	1	127320	junction_1	98013.82233445444	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	652	1731	15.0	-29	False	AATAAA	-17
PB.5761.2	chr19	+	1553	12	full-splice_match	GCDH	ENST00000222214.9	1956	12	134	269	0	22	multi-exon	FALSE	canonical	1	127320	junction_1	93736.08366556968	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	78	1394	20.0	0	True	TTTAAA	-24
PB.5761.3	chr19	+	2548	12	full-splice_match	GCDH	ENST00000222214.9	1956	12	136	-728	2	27	multi-exon	FALSE	canonical	1	127320	junction_1	93736.08366556968	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	76	1392	30.0	2	True	NA	NA
PB.860.10	chr1	+	3831	5	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	1	intron_retention	FALSE	canonical	1	206654	junction_1	149317.5198854776	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	55	1089	40.0	1	True	NA	NA
PB.51.2	chr1	+	3021	11	novel_not_in_catalog	RNF207	novel	3924	18	NA	NA	542	-13	intron_retention	FALSE	canonical	1	26715	junction_8	20380.77339773935	NA	9	NA	TRUE	NA	NA	NA	B	coding	317	954	67	1020	45.0	477	False	AATAAA	-9
PB.51.1	chr1	+	2682	12	incomplete-splice_match	RNF207	ENST00000377939.4	3924	18	3219	507	535	-13	5prime_fragment	TRUE	canonical	1	22385	junction_9	20340.69118014308	NA	0	NA	TRUE	NA	NA	NA	B	coding	407	1224	74	1297	45.0	470	False	AATAAA	-9
PB.11093.1	chr8	-	2557	6	novel_in_catalog	PLPP5	novel	2185	6	NA	NA	-4	3	intron_retention	FALSE	canonical	1	179608	junction_1	93211.4691814264	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	842	1240	30.0	-11	True	AATAAA	-5
PB.851.4	chr1	+	3677	14	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	13	-4	intron_retention	FALSE	canonical	1	646165	junction_4	202641.8069922902	NA	1	NA	TRUE	NA	NA	NA	C	coding	627	1884	32	1915	25.0	1	True	ATTAAA	-15
PB.3420.1	chr14	-	2100	2	novel_not_in_catalog	LINC01588	novel	1595	12	NA	NA	-21506	-17410	any annotated donor/acceptor	FALSE	canonical	1	1387	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.3737.2	chr15	-	3011	20	incomplete-splice_match	HERC2	ENST00000261609.11	15337	93	-19	143467	-19	-19	3prime_fragment	FALSE	canonical	1	1013	junction_19	44718.2732411833	NA	0	NA	TRUE	NA	NA	NA	B	coding	961	2883	129	3011	65.0	NA	False	NA	NA
PB.3737.1	chr15	-	3461	19	novel_in_catalog	HERC2	novel	15337	93	NA	NA	-12	-19	intron_retention	FALSE	canonical	1	1013	junction_18	45642.50897703955	NA	0	NA	TRUE	NA	NA	NA	B	coding	656	1968	1494	3461	65.0	NA	False	NA	NA
PB.492.1	chr1	+	2196	1	incomplete-splice_match	IFI44L	ENST00000370751.9	5874	9	22752	795	6463	-795	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	99	300	1212	1511	15.0	-6719	False	NA	NA
PB.9968.3	chr6	+	3831	8	novel_in_catalog	RNF8	novel	5631	8	NA	NA	17	10	combination_of_known_junctions	FALSE	canonical	1	9164	junction_3	89380.44889078576	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	170	1174	10.0	13	True	AATAAA	-23
PB.9968.2	chr6	+	2227	8	full-splice_match	RNF8	ENST00000229866.10	2124	8	-31	-72	5	9	multi-exon	FALSE	canonical	1	15139	junction_2	87111.93307041985	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	492	1745	10.0	1	True	AATAAA	-22
PB.9968.1	chr6	+	2082	8	novel_not_in_catalog	RNF8	novel	5631	8	NA	NA	4	-2	any annotated donor/acceptor	FALSE	canonical	1	459	junction_7	116139.21392247587	NA	10	2	TRUE	NA	NA	NA	C	coding	403	1212	183	1394	10.0	0	True	AATAAA	-11
PB.8092.28	chr3	-	2261	9	incomplete-splice_match	PFKFB4	ENST00000416568.5	1575	14	26	14651	26	1187	3prime_fragment	FALSE	canonical	1	126644	junction_8	43448.16875312468	NA	8	NA	TRUE	NA	NA	NA	C	coding	350	1053	88	1140	25.0	9373	False	NA	NA
PB.9968.6	chr6	+	2041	8	full-splice_match	RNF8	ENST00000373479.8	5631	8	93	3497	1	10	multi-exon	FALSE	canonical	1	192451	junction_1	30286.747219581986	NA	4	NA	TRUE	NA	NA	NA	C	coding	485	1458	101	1558	10.0	11	True	AATAAA	-23
PB.9968.5	chr6	+	2256	9	novel_in_catalog	RNF8	novel	5631	8	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	6632	junction_1	110578.92383037726	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	498	1784	10.0	16	True	AATAAA	-12
PB.9968.4	chr6	+	2171	8	novel_not_in_catalog	RNF8	novel	5631	8	NA	NA	17	10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	116470.1835419079	NA	10	2	TRUE	NA	NA	NA	C	coding	371	1116	170	1285	10.0	13	True	AATAAA	-23
PB.11093.5	chr8	-	3601	3	incomplete-splice_match	PLPP5	ENST00000424479.6	2130	7	-9	8	1	0	intron_retention	FALSE	canonical	1	179608	junction_1	88147.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	1822	2295	50.0	-16	True	AGTAAA	-11
PB.6031.1	chr19	+	1936	6	incomplete-splice_match	CIC	ENST00000575354.6	5473	20	8319	0	-623	0	5prime_fragment	FALSE	canonical	1	360282	junction_2	78997.72445482212	NA	0	NA	TRUE	NA	NA	NA	A	coding	344	1035	296	1330	5.0	-9148	False	ATTAAA	-15
PB.860.11	chr1	+	3172	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-17	-466	1	466	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	55	1062	80.0	1	True	NA	NA
PB.7923.4	chr3	-	2493	1	novel_in_catalog	RPUSD3	novel	1178	8	NA	NA	-6	-108	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.11224.5	chr8	+	1938	10	full-splice_match	RIPK2	ENST00000522965.1	1916	10	-22	0	-22	0	multi-exon	FALSE	canonical	1	125387	junction_1	101324.4338833323	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	535	1746	20.0	-32	True	AGTAAA	-21
PB.4449.18	chr16	+	3302	3	full-splice_match	CX3CL1	ENST00000006053.6	3321	3	13	6	-6	0	multi-exon	FALSE	canonical	1	155613	junction_1	31038.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	397	1194	99	1292	30.0	0	True	AATAAA	-17
PB.7923.3	chr3	-	2237	8	novel_in_catalog	RPUSD3	novel	756	4	NA	NA	1	-1	intron_retention	FALSE	canonical	1	266797	junction_7	107601.33418678187	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	4	756	20.0	-10	True	NA	NA
PB.851.5	chr1	+	3119	16	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	-16	-5	intron_retention	FALSE	canonical	1	646165	junction_4	215900.39315618572	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	28	1890	20.0	5	True	ATTAAA	-14
PB.7923.1	chr3	-	1224	9	full-splice_match	RPUSD3	ENST00000383820.9	1225	9	0	1	0	-1	multi-exon	FALSE	canonical	1	266797	junction_8	101815.05085255999	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	3	1058	20.0	-9	True	NA	NA
PB.4449.14	chr16	+	2955	3	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	132	-8	any annotated donor/acceptor	FALSE	canonical	1	199	junction_1	339164.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-6831	False	AATAAA	-7
PB.8099.6	chr3	+	2206	16	novel_in_catalog	ARIH2	novel	598	3	NA	NA	1	-14	combination_of_known_junctions	FALSE	canonical	1	5825	junction_1	199311.72416154775	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	389	1870	85.0	-35	True	NA	NA
PB.4449.10	chr16	+	2084	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	299078.4245336924	NA	32	1	TRUE	NA	NA	NA	C	coding	93	282	35	316	0.0	0	True	AATAAA	-14
PB.4449.11	chr16	+	1867	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	299078.4245336924	NA	0	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	0.0	0	True	AATAAA	-15
PB.4449.12	chr16	+	1821	4	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	11	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	299078.4245336924	NA	1	NA	TRUE	NA	NA	NA	C	coding	93	282	35	316	5.0	0	True	AATAAA	-16
PB.4449.13	chr16	+	2709	5	novel_not_in_catalog	CCL22	novel	2929	3	NA	NA	12	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	316225.94701208104	NA	21	2	TRUE	NA	NA	NA	C	coding	93	282	34	315	5.0	1	True	AATAAA	-18
PB.860.30	chr1	+	2010	6	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	6	984	intron_retention	FALSE	canonical	1	206654	junction_1	133590.6560708495	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	29	853	70.0	1	True	AAAACA	-12
PB.7090.11	chr2	+	1813	11	novel_not_in_catalog	LRRFIP1	novel	2775	24	NA	NA	-2	-1542	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	139415.49084588842	NA	12	1	TRUE	NA	NA	NA	C	coding	445	1335	477	1811	80.0	4	True	NA	NA
PB.7858.1	chr22	+	2856	10	novel_not_in_catalog	FAM118A	novel	711	3	NA	NA	112	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_4	97464.7077791194	NA	1	NA	TRUE	NA	NA	NA	B	coding	357	1074	235	1308	15.0	4	True	AATAAA	-12
PB.7090.17	chr2	+	2224	4	incomplete-splice_match	LRRFIP1	ENST00000478958.5	2869	6	2850	7	-897	-1	5prime_fragment	FALSE	canonical	1	310333	junction_3	27245.68925332756	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	960	1448	20.0	-8849	False	ATTAAA	-16
PB.7858.2	chr22	+	2679	8	novel_in_catalog	FAM118A	novel	711	3	NA	NA	67	-2	no_combination_of_known_junctions	FALSE	canonical	1	8629	junction_3	85306.1919656098	NA	0	NA	TRUE	NA	NA	NA	B	coding	283	852	280	1131	15.0	-8970	False	AATAAA	-12
PB.8096.2	chr3	-	3656	5	novel_in_catalog	IP6K2	novel	1775	6	NA	NA	-5	0	intron_retention	FALSE	canonical	1	508504	junction_4	91806.6706359075	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	2130	3386	15.0	-7	True	AATACA	-20
PB.8096.3	chr3	-	1963	2	full-splice_match	IP6K2	ENST00000449610.5	1673	2	-29	-261	-5	-3	multi-exon	FALSE	canonical	1	508504	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	196	588	35.0	-7	True	ATTAAA	-17
PB.8601.42	chr3	+	5510	28	novel_in_catalog	OPA1	novel	6384	30	NA	NA	69	0	no_combination_of_known_junctions	FALSE	canonical	1	9774	junction_1	177023.01884126125	NA	3	1	TRUE	NA	NA	NA	C	coding	837	2514	71	2584	35.0	39	False	ATTAAA	-16
PB.9640.2	chr5	+	3141	18	full-splice_match	FGFR4	ENST00000292408.8	3122	18	-19	0	-19	0	multi-exon	FALSE	canonical	1	33227	junction_1	50789.38817921886	NA	1	NA	TRUE	NA	NA	NA	C	coding	802	2409	265	2673	25.0	-5272	False	AATAAA	-19
PB.8096.1	chr3	-	1745	6	full-splice_match	IP6K2	ENST00000328631.9	1775	6	31	-1	-3	1	multi-exon	FALSE	canonical	1	484329	junction_4	89275.00689129069	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	194	1474	15.0	-5	True	AATACA	-21
PB.5860.9	chr19	+	4075	17	novel_in_catalog	MAU2	novel	4994	19	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	1	10847	junction_1	100008.60884129473	NA	0	NA	TRUE	NA	NA	NA	B	coding	585	1758	21	1778	95.0	-5	True	NA	NA
PB.860.17	chr1	+	2597	6	full-splice_match	SLAMF7	ENST00000359331.8	2559	6	-43	5	1	2	multi-exon	FALSE	canonical	1	26171	junction_4	186626.51651938423	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	55	945	40.0	1	True	NA	NA
PB.11050.21	chr8	+	3106	2	novel_not_in_catalog	PTK2B	novel	4719	36	NA	NA	2	2658	any annotated donor/acceptor	FALSE	canonical	1	8129	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-6	True	AAAAAG	-10
PB.3118.1	chr13	+	2720	19	full-splice_match	COG6	ENST00000455146.7	3563	19	-46	889	4	-757	multi-exon	FALSE	canonical	1	119972	junction_12	50832.76620318123	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	97	2070	70.0	-141	False	NA	NA
PB.8096.4	chr3	-	1708	2	full-splice_match	IP6K2	ENST00000449610.5	1673	2	-24	-11	0	11	multi-exon	FALSE	canonical	1	508504	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	191	583	40.0	-2	True	AATAAA	-13
PB.1208.1	chr1	+	3386	1	genic	AL355472.3	novel	NA	NA	NA	NA	-26	-5463	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-51	False	NA	NA
PB.9640.3	chr5	+	3047	18	novel_in_catalog	FGFR4	novel	3122	18	NA	NA	-9	-25	combination_of_known_junctions	FALSE	canonical	1	11760	junction_1	53970.797714099	NA	0	NA	TRUE	NA	NA	NA	C	coding	802	2409	196	2604	30.0	2	True	TATAAA	-12
PB.8092.25	chr3	-	3999	15	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1817	933	intron_retention	FALSE	canonical	1	6164	junction_14	71743.74136911007	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	1578	2993	20.0	2405	False	CATAAA	-28
PB.8601.48	chr3	+	3598	5	incomplete-splice_match	OPA1	ENST00000646544.1	5071	20	26860	-10	1988	0	5prime_fragment	FALSE	canonical	1	364840	junction_3	96933.69265766161	NA	3	NA	TRUE	NA	NA	NA	C	coding	75	228	161	388	15.0	-1511	False	TATAAA	-18
PB.5860.6	chr19	+	4839	18	novel_not_in_catalog	MAU2	novel	4994	19	NA	NA	148	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	100165.8226280863	NA	4	1	TRUE	NA	NA	NA	B	coding	421	1266	603	1868	5.0	-16	True	AGTAAA	-17
PB.860.14	chr1	+	2581	6	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	7489	junction_3	200404.33566008497	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	55	942	40.0	1	True	NA	NA
PB.1187.15	chr1	-	2340	17	incomplete-splice_match	NUP133	ENST00000261396.5	5207	26	-18	25229	-18	-16717	3prime_fragment	FALSE	canonical	1	234689	junction_11	59423.48884775989	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2229	111	2339	45.0	-33	True	NA	NA
PB.1193.6	chr1	-	2694	23	full-splice_match	TTC13	ENST00000366661.8	3253	23	-10	569	-10	-569	multi-exon	FALSE	canonical	1	59704	junction_15	44631.5789667598	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	19	2601	30.0	-2	True	TATAAA	-16
PB.1187.10	chr1	-	3666	27	novel_not_in_catalog	NUP133	novel	5207	26	NA	NA	-3	38	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	98346.74878575951	NA	0	NA	TRUE	NA	NA	NA	C	coding	1140	3423	81	3503	15.0	-3	True	TATAAA	-18
PB.1187.11	chr1	-	3601	26	full-splice_match	NUP133	ENST00000261396.5	5207	26	-21	1627	-21	-108	multi-exon	FALSE	canonical	1	234689	junction_20	69783.50246648272	NA	1	NA	TRUE	NA	NA	NA	C	coding	1156	3471	114	3584	30.0	-36	True	AATATA	-19
PB.1187.12	chr1	-	3626	21	incomplete-splice_match	NUP133	ENST00000261396.5	5207	26	-30	17377	-30	-8865	3prime_fragment	FALSE	canonical	1	234689	junction_15	75783.49252502156	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	123	3116	75.0	-45	True	ATTAAA	-18
PB.1187.13	chr1	-	3067	21	incomplete-splice_match	NUP133	ENST00000261396.5	5207	26	-9	17915	-9	-9403	3prime_fragment	FALSE	canonical	1	234689	junction_15	75783.49252502156	NA	0	NA	TRUE	NA	NA	NA	C	coding	988	2964	102	3065	60.0	-24	True	AGTAAA	-42
PB.4440.6	chr16	-	2517	17	full-splice_match	BBS2	ENST00000245157.9	2963	17	225	221	-2	-218	multi-exon	FALSE	canonical	1	189121	junction_16	73881.77979229618	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	197	2362	25.0	-35	True	ATTAAA	-20
PB.4440.5	chr16	-	3067	16	novel_in_catalog	BBS2	novel	395	3	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	5850	junction_5	107192.86904557701	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	186	1139	25.0	-24	True	ATTAAA	-13
PB.4440.4	chr16	-	2681	17	novel_in_catalog	BBS2	novel	395	3	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1390	junction_7	104056.3341852023	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	191	2308	25.0	-29	True	ATTAAA	-14
PB.4440.3	chr16	-	2941	16	novel_in_catalog	BBS2	novel	395	3	NA	NA	-7	0	intron_retention	FALSE	canonical	1	189121	junction_15	75879.99380764925	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	1372	2568	25.0	-25	True	ATTAAA	-14
PB.4440.2	chr16	-	2672	17	full-splice_match	BBS2	ENST00000245157.9	2963	17	229	62	2	-59	multi-exon	FALSE	canonical	1	189121	junction_16	73881.77979229618	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	193	2358	25.0	-31	True	TATAAA	-25
PB.4440.1	chr16	-	2575	18	novel_in_catalog	BBS2	novel	395	3	NA	NA	3	6	combination_of_known_junctions	TRUE	canonical	1	31107	junction_1	98150.97449701048	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	192	2357	25.0	-30	True	AATAAA	-27
PB.8539.7	chr3	+	4602	10	full-splice_match	TTC14	ENST00000412756.6	4568	10	-30	-4	-26	0	multi-exon	FALSE	canonical	1	207959	junction_5	39408.440494986775	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	100	1419	20.0	-36	True	ATTAAA	-23
PB.1272.5	chr10	-	3175	25	novel_not_in_catalog	PITRM1	novel	778	2	NA	NA	26	0	any annotated donor/acceptor	FALSE	canonical	1	3430	junction_21	238370.92891739696	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	621	2588	25.0	0	True	AATAAA	-16
PB.1272.4	chr10	-	3227	25	novel_in_catalog	PITRM1	novel	778	2	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	1	13180	junction_9	172118.02724232562	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	11	2926	25.0	-1	True	AATAAA	-16
PB.8092.24	chr3	-	4113	16	novel_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1802	934	intron_retention	FALSE	canonical	1	6164	junction_15	85195.69019449022	NA	3	NA	TRUE	NA	NA	NA	C	coding	278	837	2270	3106	20.0	2420	False	CATAAA	-29
PB.1272.1	chr10	-	3429	27	full-splice_match	PITRM1	ENST00000224949.8	3450	27	22	-1	22	1	multi-exon	FALSE	canonical	1	424501	junction_11	121506.18447671804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1037	3114	14	3127	20.0	-4	True	AATAAA	-17
PB.1272.3	chr10	-	3384	27	novel_not_in_catalog	PITRM1	novel	778	2	NA	NA	22	0	any annotated donor/acceptor	FALSE	canonical	1	20389	junction_4	201765.94665310223	NA	2	1	TRUE	NA	NA	NA	C	coding	927	2784	14	2797	25.0	-4	True	AATAAA	-16
PB.1272.2	chr10	-	3381	27	novel_not_in_catalog	PITRM1	novel	778	2	NA	NA	25	0	any annotated donor/acceptor	FALSE	canonical	1	23526	junction_23	168009.96163115383	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	582	3080	25.0	-1	True	AATAAA	-16
PB.1323.2	chr10	+	1591	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-49	5654	-49	-5654	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	283	822	45.0	-203	False	AATAAA	-21
PB.1323.3	chr10	+	2917	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-34	4313	-34	-4313	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	268	807	40.0	1	True	ATTAAA	-30
PB.1323.1	chr10	+	3542	5	novel_in_catalog	ARL5B	novel	7196	6	NA	NA	-57	-3627	no_combination_of_known_junctions	FALSE	canonical	1	12148	junction_3	84231.39103201074	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	291	746	20.0	-211	False	AATACA	-12
PB.1323.6	chr10	+	8243	5	incomplete-splice_match	ARL5B	ENST00000377275.3	7196	6	-19	4	-19	-4	intron_retention	FALSE	canonical	1	124988	junction_1	38891.47389210134	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	253	747	40.0	-45	True	AATAAA	-14
PB.1323.7	chr10	+	3539	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	35	3622	35	-3622	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	199	738	15.0	9	True	AATACA	-17
PB.1323.4	chr10	+	2030	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-34	5200	-34	-5200	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	268	807	35.0	1	True	ATTAAA	-15
PB.1323.5	chr10	+	7220	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-28	4	-28	-4	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	262	801	40.0	-182	False	AATAAA	-14
PB.1323.8	chr10	+	5740	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-15	1471	-15	-1471	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	2	NA	TRUE	NA	NA	NA	C	coding	179	540	249	788	25.0	-41	True	ATTAAA	-23
PB.1323.9	chr10	+	4747	6	full-splice_match	ARL5B	ENST00000377275.3	7196	6	-11	2460	-11	-2460	multi-exon	FALSE	canonical	1	124988	junction_1	39082.56963404531	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	245	784	65.0	-37	True	AATAGA	-19
PB.354.8	chr1	+	3533	22	novel_in_catalog	AL451062.3	novel	4037	26	NA	NA	330	-226541	no_combination_of_known_junctions	FALSE	canonical	1	27065	junction_1	93800.46537226999	NA	8	NA	TRUE	NA	NA	NA	B	coding	1064	3195	236	3430	70.0	-8	True	NA	NA
PB.354.9	chr1	+	4549	22	novel_in_catalog	AL451062.3	novel	4037	26	NA	NA	357	-225498	no_combination_of_known_junctions	FALSE	canonical	1	27065	junction_1	93800.46537226999	NA	0	NA	TRUE	NA	NA	NA	B	coding	1064	3195	209	3403	15.0	0	True	AATAAA	-16
PB.6699.7	chr2	-	1500	5	incomplete-splice_match	CKAP2L	ENST00000302450.10	4533	9	37	15804	-22	4364	3prime_fragment	FALSE	canonical	1	155091	junction_2	12088.70717860268	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1458	43	1500	75.0	-32	True	TATAAA	-19
PB.850.3	chr1	-	3612	8	full-splice_match	PEX19	ENST00000368072.9	3661	8	5	44	0	11	multi-exon	FALSE	canonical	1	459830	junction_6	108256.63218840456	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	18	917	35.0	-9	True	ATTAAA	-32
PB.8793.12	chr4	-	3037	11	full-splice_match	PPAT	ENST00000264220.6	3682	11	3	642	3	-639	multi-exon	FALSE	canonical	1	24872	junction_1	59558.05574471014	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	136	1689	15.0	-1	True	NA	NA
PB.8793.13	chr4	-	2147	11	full-splice_match	PPAT	ENST00000264220.6	3682	11	14	1521	14	-1518	multi-exon	FALSE	canonical	1	24872	junction_1	59558.05574471014	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	125	1678	70.0	10	True	NA	NA
PB.8793.10	chr4	-	3089	11	full-splice_match	PPAT	ENST00000264220.6	3682	11	114	479	-5	-476	multi-exon	FALSE	canonical	1	24872	junction_1	59558.05574471014	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	25	1578	20.0	-1	True	AATAAA	-17
PB.8793.11	chr4	-	3089	11	novel_in_catalog	PPAT	novel	3682	11	NA	NA	31	-476	combination_of_known_junctions	FALSE	canonical	1	17328	junction_9	67516.06293386781	NA	5	NA	TRUE	NA	NA	NA	C	coding	436	1311	268	1578	20.0	27	True	AATAAA	-17
PB.8828.1	chr4	-	1846	11	full-splice_match	NAAA	ENST00000286733.8	1900	11	45	9	5	-9	multi-exon	FALSE	canonical	1	106273	junction_2	113028.5942064662	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	58	1137	35.0	6	True	AATAAA	-42
PB.8823.2	chr4	+	2252	4	full-splice_match	PARM1	ENST00000307428.7	5011	4	-80	2839	-59	-2839	multi-exon	FALSE	canonical	1	216896	junction_2	9300.593672807488	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	293	1225	85.0	-1990	False	NA	NA
PB.8828.3	chr4	-	1371	10	novel_not_in_catalog	NAAA	novel	1900	11	NA	NA	-2	-368	any annotated donor/acceptor	FALSE	canonical	1	15786	junction_1	124127.45516694614	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	65	1075	100.0	-1	True	NA	NA
PB.2502.1	chr12	-	2349	3	full-splice_match	KCNJ8	ENST00000240662.2	2389	3	45	-5	45	5	multi-exon	FALSE	canonical	1	44580	junction_2	8313.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	424	1275	302	1576	10.0	823	False	ATTAAA	-20
PB.748.3	chr1	-	2132	12	novel_in_catalog	SELENBP1	novel	1752	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	5130	junction_8	289186.67471515684	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	1070	1894	10.0	-2	True	AATAAA	-19
PB.8747.12	chr4	+	3742	5	incomplete-splice_match	UBE2K	ENST00000445950.2	2175	6	-29	1888	8	-289	3prime_fragment	FALSE	canonical	1	1012836	junction_3	158427.74473616513	NA	5	NA	TRUE	NA	NA	NA	C	coding	149	450	182	631	90.0	2	True	NA	NA
PB.11871.1	chr9	-	2131	1	antisense	novelGene_GTF3C4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	115	348	1188	1535	30.0	NA	False	NA	NA
PB.504.26	chr1	-	3472	1	novel_in_catalog	MCOLN2	novel	2403	12	NA	NA	0	-28093	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	101	306	1995	2300	100.0	-5	True	NA	NA
PB.504.27	chr1	-	3333	1	genic	MCOLN2	novel	NA	NA	NA	NA	-30	-28262	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	10	NA	NA	NA	NA	NA	C	coding	101	306	2025	2330	60.0	-8	False	NA	NA
PB.4851.3	chr17	-	2686	10	novel_in_catalog	AC005726.1	novel	2091	8	NA	NA	42671	26623	intron_retention	FALSE	canonical	1	4973	junction_2	171838.8265843216	NA	1	NA	TRUE	NA	NA	NA	B	coding	373	1122	313	1434	30.0	-5	True	NA	NA
PB.4851.2	chr17	-	2640	11	full-splice_match	PIGS	ENST00000395346.6	2815	11	173	2	141	-2	multi-exon	FALSE	canonical	1	408231	junction_10	66028.11185729908	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	166	1809	30.0	5531	False	NA	NA
PB.4851.5	chr17	-	2530	12	full-splice_match	PIGS	ENST00000308360.7	2877	12	345	2	1	-2	multi-exon	FALSE	canonical	1	176662	junction_11	120214.01534178552	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	32	1699	30.0	-22	True	NA	NA
PB.4851.4	chr17	-	2654	13	novel_not_in_catalog	AC005726.1	novel	2091	8	NA	NA	42647	26623	any annotated donor/acceptor	FALSE	canonical	1	3775	junction_5	215929.1348924682	NA	2	NA	TRUE	NA	NA	NA	B	coding	594	1785	39	1823	30.0	-29	True	NA	NA
PB.504.20	chr1	-	2454	12	novel_in_catalog	MCOLN2	novel	2871	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	4115	junction_5	32155.6737818326	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	240	1103	80.0	-3	True	NA	NA
PB.4851.6	chr17	-	2387	11	full-splice_match	PIGS	ENST00000268758.13	2397	11	4	6	4	-2	multi-exon	FALSE	canonical	1	3358	junction_10	170902.58840816308	NA	6	1	TRUE	NA	NA	NA	C	coding	494	1485	72	1556	30.0	-19	True	NA	NA
PB.5696.1	chr19	+	1189	9	full-splice_match	MRPL4	ENST00000253099.10	1455	9	272	-6	12	6	multi-exon	FALSE	canonical	1	835738	junction_1	279729.28621660266	NA	0	NA	TRUE	NA	NA	NA	A	coding	311	936	16	951	35.0	25	True	AATAAA	-24
PB.1639.1	chr10	+	2332	4	incomplete-splice_match	SLK	ENST00000335753.8	7673	18	52641	1649	11644	-1649	5prime_fragment	FALSE	canonical	1	464605	junction_2	36865.99612410089	NA	8	NA	TRUE	NA	NA	NA	B	coding	153	462	7	468	25.0	NA	False	GATAAA	-42
PB.504.28	chr1	-	3014	1	genic	MCOLN2	novel	NA	NA	NA	NA	-2	-28553	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	coding	101	306	1997	2302	55.0	-7	True	NA	NA
PB.293.1	chr1	-	3620	7	novel_in_catalog	MRPS15	novel	1006	8	NA	NA	41	0	intron_retention	FALSE	canonical	1	1278856	junction_6	218820.0740276637	NA	1	NA	TRUE	NA	NA	NA	C	coding	100	303	3303	3605	20.0	-15	True	AATAAA	-15
PB.9862.5	chr6	-	2652	18	full-splice_match	CCHCR1	ENST00000376266.9	2625	18	-28	1	-28	-1	multi-exon	FALSE	canonical	1	34438	junction_17	56966.908719526145	NA	5	NA	TRUE	NA	NA	NA	C	coding	782	2349	152	2500	25.0	-78	False	AATAAA	-16
PB.4436.1	chr16	+	3852	14	full-splice_match	LPCAT2	ENST00000262134.9	5391	14	72	1467	-2	-1463	multi-exon	TRUE	canonical	1	110006	junction_1	37602.315197983764	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	113	1747	35.0	-2	True	ATTAAA	-18
PB.4436.2	chr16	+	1884	14	full-splice_match	LPCAT2	ENST00000262134.9	5391	14	73	3434	-1	-1	multi-exon	FALSE	canonical	1	110006	junction_1	37602.315197983764	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	112	1746	40.0	-1	True	TTTAAA	-41
PB.4436.3	chr16	+	3256	14	full-splice_match	LPCAT2	ENST00000262134.9	5391	14	74	2061	0	1372	multi-exon	FALSE	canonical	1	110006	junction_1	37602.315197983764	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	111	1745	15.0	0	True	AATAAA	-14
PB.4436.4	chr16	+	5310	14	full-splice_match	LPCAT2	ENST00000262134.9	5391	14	75	6	1	-2	multi-exon	FALSE	canonical	1	110006	junction_1	37602.315197983764	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	110	1744	15.0	1	True	ATTAAA	-15
PB.2681.8	chr12	-	3738	29	full-splice_match	TIMELESS	ENST00000229201.4	4376	29	-3	641	-3	530	multi-exon	TRUE	canonical	1	58425	junction_23	109779.91723789433	NA	0	NA	TRUE	NA	NA	NA	C	coding	1188	3564	174	3737	60.0	-1	True	NA	NA
PB.2681.9	chr12	-	1774	13	incomplete-splice_match	TIMELESS	ENST00000553532.5	5121	29	-45	11863	-41	-6684	3prime_fragment	FALSE	canonical	1	178118	junction_12	45750.40844892049	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1563	212	1774	25.0	3	True	NA	NA
PB.11447.1	chr9	-	2313	4	novel_not_in_catalog	KIAA2026	novel	6988	8	NA	NA	-588	-9	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	77668.59681149562	NA	0	NA	TRUE	NA	NA	NA	B	coding	681	2043	269	2311	85.0	-8	True	ACTAAA	-9
PB.2681.4	chr12	-	4347	29	full-splice_match	TIMELESS	ENST00000553532.5	5121	29	-27	801	-23	-47	multi-exon	FALSE	canonical	1	178118	junction_28	95465.78315860995	NA	0	NA	TRUE	NA	NA	NA	C	coding	1203	3612	194	3805	10.0	-21	True	AATATA	-16
PB.2681.2	chr12	-	4523	30	novel_not_in_catalog	TIMELESS	novel	5121	29	NA	NA	-22	0	any annotated donor/acceptor	FALSE	canonical	1	408	junction_28	126078.66494375645	NA	1	NA	TRUE	NA	NA	NA	C	coding	1203	3612	315	3926	20.0	-20	True	ATTAAA	-27
PB.2681.3	chr12	-	4593	28	novel_in_catalog	TIMELESS	novel	5121	29	NA	NA	-3	3	intron_retention	FALSE	canonical	1	178118	junction_27	93547.14017720336	NA	0	NA	TRUE	NA	NA	NA	C	coding	954	2865	174	3038	20.0	-1	True	ATTAAA	-22
PB.2681.1	chr12	-	4579	28	novel_in_catalog	TIMELESS	novel	5121	29	NA	NA	-57	0	intron_retention	FALSE	canonical	1	178118	junction_27	96731.03624580856	NA	3	1	TRUE	NA	NA	NA	C	coding	771	2316	1667	3982	20.0	5196	False	ATTAAA	-27
PB.11889.2	chr9	-	2832	13	novel_not_in_catalog	BRD3	novel	5652	12	NA	NA	16	520	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70606.93230419887	NA	1	1	TRUE	NA	NA	NA	C	coding	726	2181	171	2351	90.0	-3	True	NA	NA
PB.8980.1	chr4	+	2883	1	antisense	novelGene_PGRMC2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.6467.15	chr2	+	5251	24	novel_not_in_catalog	SPTBN1	novel	8482	36	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	564923.7727437065	NA	8	2	TRUE	NA	NA	NA	C	coding	757	2274	1873	4146	20.0	-2191	False	ATTAAA	-14
PB.12097.13	chrX	+	2454	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-3	4212	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	68166.53802040631	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	229	1977	20.0	1	True	NA	NA
PB.12097.12	chrX	+	2364	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-4	1548	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	71155.1098880994	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	113	1861	65.0	0	True	AATACA	-34
PB.12097.11	chrX	+	2451	16	full-splice_match	GNL3L	ENST00000360845.2	2135	16	-7	-309	-7	1	multi-exon	FALSE	canonical	1	122053	junction_1	44791.011957708164	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	233	1981	100.0	-3	True	NA	NA
PB.12097.10	chrX	+	2646	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-7	4212	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	71155.1098880994	NA	13	NA	TRUE	NA	NA	NA	C	coding	582	1749	116	1864	20.0	-3	True	NA	NA
PB.12097.17	chrX	+	2407	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	19	4211	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	68166.53802040631	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	207	1955	20.0	23	True	NA	NA
PB.12097.16	chrX	+	2753	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	18	1878	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	68166.53802040631	NA	2	1	TRUE	NA	NA	NA	C	coding	582	1749	208	1956	10.0	22	True	NA	NA
PB.12097.15	chrX	+	2427	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	14	1548	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	68166.53802040631	NA	1	1	TRUE	NA	NA	NA	C	coding	582	1749	212	1960	65.0	18	True	AATACA	-34
PB.12097.14	chrX	+	2789	19	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-2	4211	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	92264.11709641104	NA	4	1	TRUE	NA	NA	NA	C	coding	582	1749	111	1859	20.0	2	True	NA	NA
PB.12097.19	chrX	+	2360	17	novel_not_in_catalog	GNL3L	novel	2357	16	NA	NA	-25	4212	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	68166.53802040631	NA	1	1	TRUE	NA	NA	NA	C	coding	582	1749	180	1928	20.0	-44	False	NA	NA
PB.11938.1	chrY	-	1907	10	full-splice_match	GTPBP6	ENST00000326153.9_PAR_Y	1907	10	-5	5	-5	-5	multi-exon	TRUE	canonical	0	0	junction_6	114.7838548461121	NA	2	NA	TRUE	NA	NA	NA	A	coding	516	1551	38	1588	20.0	NA	False	ATTAAA	-17
PB.10533.4	chr7	-	2230	11	novel_not_in_catalog	TBRG4	novel	2243	11	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_10	251392.56811417476	NA	2	NA	TRUE	NA	NA	NA	C	coding	631	1896	109	2004	5.0	-24	True	NA	NA
PB.8812.6	chr4	-	3357	10	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	7	3	intron_retention	FALSE	non_canonical	0	0	junction_9	502421.77551604126	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	350	1171	35.0	-1	True	AATAAA	-26
PB.8812.7	chr4	-	2642	11	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	487454.60186894325	NA	1	1	TRUE	NA	NA	NA	C	coding	318	957	332	1288	40.0	3359	False	AATAAA	-21
PB.8812.4	chr4	-	3043	11	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	15	410	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	487454.60186894325	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	39	1277	35.0	3366	False	ATTAAA	-14
PB.8812.5	chr4	-	2979	10	full-splice_match	GRSF1	ENST00000254799.10	6666	10	-59	3746	-59	3	multi-exon	FALSE	canonical	1	401834	junction_9	337155.39673766657	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	178	1620	35.0	3227	False	AATAAA	-26
PB.8812.2	chr4	-	4647	11	novel_not_in_catalog	GRSF1	novel	6666	10	NA	NA	-5	-6	intron_retention	FALSE	canonical	1	126	junction_1	487426.07816579734	NA	2	1	TRUE	NA	NA	NA	C	coding	480	1443	76	1518	25.0	4	True	NA	NA
PB.9192.1	chr5	+	4251	1	intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	86	261	167	427	65.0	-162	False	NA	NA
PB.6467.12	chr2	+	3692	6	incomplete-splice_match	SPTBN1	ENST00000333896.5	9075	31	-12	41544	-12	-8440	3prime_fragment	FALSE	canonical	1	433650	junction_1	295010.9202518442	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	398	1156	60.0	-1	True	NA	NA
PB.11647.15	chr9	-	2878	11	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	-7	1166	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	83993.89970920507	NA	1	1	TRUE	NA	NA	NA	B	coding	919	2757	121	2877	65.0	213	False	NA	NA
PB.8812.8	chr4	-	2504	10	full-splice_match	GRSF1	ENST00000499044.6	2491	10	212	-225	52	0	multi-exon	FALSE	canonical	1	24393	junction_9	443714.49133726896	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	194	1150	40.0	3940	False	AATAAA	-21
PB.9394.9	chr5	-	4613	17	novel_in_catalog	MCC	novel	8257	17	NA	NA	-71	875	combination_of_known_junctions	FALSE	canonical	1	6577	junction_16	22382.154648622276	NA	3	NA	TRUE	NA	NA	NA	C	coding	766	2301	268	2568	70.0	-1	True	AAAACA	-9
PB.4845.2	chr17	+	3573	7	full-splice_match	TNFAIP1	ENST00000226225.6	3627	7	52	2	-5	-2	multi-exon	FALSE	canonical	1	272502	junction_1	84432.90715595166	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	216	1166	30.0	-5	True	AATAAA	-15
PB.4845.3	chr17	+	3308	1	novel_in_catalog	TNFAIP1	novel	1656	6	NA	NA	0	-1357	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.4845.1	chr17	+	3718	8	novel_not_in_catalog	TNFAIP1	novel	1656	6	NA	NA	-5	2450	intron_retention	FALSE	canonical	1	6012	junction_7	170646.21523299874	NA	3	NA	TRUE	NA	NA	NA	C	coding	316	951	216	1166	100.0	-5	True	NA	NA
PB.4845.6	chr17	+	1853	7	full-splice_match	TNFAIP1	ENST00000226225.6	3627	7	60	1714	3	40	multi-exon	FALSE	canonical	1	272502	junction_1	84432.90715595166	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	208	1158	70.0	3	True	GATAAA	-9
PB.10533.5	chr7	-	1908	9	full-splice_match	TBRG4	ENST00000361278.7	1917	9	10	-1	0	1	multi-exon	FALSE	canonical	1	66594	junction_6	261325.02473569073	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	117	1682	5.0	-12	True	NA	NA
PB.4845.4	chr17	+	3250	6	full-splice_match	TNFAIP1	ENST00000544907.6	1656	6	159	-1753	0	-1	multi-exon	FALSE	canonical	1	1982	junction_1	187559.81207028334	NA	2	NA	TRUE	NA	NA	NA	C	coding	212	639	204	842	30.0	0	True	AATAAA	-16
PB.4845.5	chr17	+	1642	7	full-splice_match	TNFAIP1	ENST00000226225.6	3627	7	57	1928	0	-174	multi-exon	FALSE	canonical	1	272502	junction_1	84432.90715595166	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	211	1161	40.0	0	True	AATGAA	-16
PB.8092.23	chr3	-	5098	16	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	-1768	-11	intron_retention	FALSE	canonical	1	435	junction_11	93617.99305394711	NA	4	NA	TRUE	NA	NA	NA	C	coding	195	588	2232	2819	45.0	-3	True	AATAAA	-7
PB.1035.14	chr1	+	3569	25	novel_in_catalog	IPO9	novel	11435	24	NA	NA	49	1	combination_of_known_junctions	FALSE	canonical	1	44700	junction_1	181579.73178239062	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	577	3249	20.0	-5	True	NA	NA
PB.1035.12	chr1	+	3478	22	novel_in_catalog	IPO9	novel	11435	24	NA	NA	22	381	no_combination_of_known_junctions	FALSE	canonical	1	648	junction_13	173796.01452266882	NA	1	NA	TRUE	NA	NA	NA	C	coding	912	2739	40	2778	75.0	-32	True	NA	NA
PB.12095.10	chrX	-	3074	21	novel_in_catalog	PHF8	novel	6062	22	NA	NA	114	-1	combination_of_known_junctions	FALSE	canonical	1	16234	junction_1	57908.19345159629	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	280	2967	40.0	-15	True	AATAAA	-29
PB.1035.10	chr1	+	4064	24	novel_not_in_catalog	IPO9	novel	11435	24	NA	NA	15	592	any annotated donor/acceptor	FALSE	canonical	1	11577	junction_1	159740.65457873853	NA	2	NA	TRUE	NA	NA	NA	C	coding	890	2673	481	3153	25.0	-39	True	AGTAAA	-22
PB.1035.11	chr1	+	2319	5	novel_not_in_catalog	IPO9	novel	11435	24	NA	NA	17	379	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	238455.16955079837	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	45	371	80.0	-37	True	NA	NA
PB.9319.1	chr5	+	1855	1	intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	141	426	1	426	35.0	-4	True	NA	NA
PB.7972.1	chr3	+	4216	18	full-splice_match	KAT2B	ENST00000263754.4	4833	18	612	5	-63	-5	multi-exon	FALSE	canonical	1	141466	junction_1	38474.43987446704	NA	5	NA	TRUE	NA	NA	NA	C	coding	675	2028	315	2342	10.0	-13	True	AATATA	-44
PB.11647.10	chr9	-	3815	17	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	112803.76183718827	NA	0	NA	TRUE	NA	NA	NA	B	coding	1167	3504	92	3595	45.0	1	True	ATTAAA	-19
PB.9287.4	chr5	+	4756	25	full-splice_match	TNPO1	ENST00000337273.9	11183	25	338	6089	1	1693	multi-exon	FALSE	canonical	1	167413	junction_3	160524.4582500884	NA	5	NA	TRUE	NA	NA	NA	C	coding	898	2697	89	2785	10.0	-11	True	AATAAA	-25
PB.3642.1	chr14	+	4889	2	intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	218	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	NA	False	AATAAA	-12
PB.10331.6	chr6	-	1808	8	novel_in_catalog	AL159163.1	novel	600	8	NA	NA	-479	-74925	no_combination_of_known_junctions	FALSE	canonical	1	5094	junction_1	375483.64224888646	NA	6	NA	TRUE	NA	NA	NA	B	coding	169	510	422	931	5.0	-27	True	AATAAA	-13
PB.11048.3	chr8	+	1668	12	novel_not_in_catalog	DPYSL2	novel	4805	14	NA	NA	102	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	339079.98431801813	NA	2	1	TRUE	NA	NA	NA	C	coding	416	1248	419	1666	15.0	-13	True	AATAAA	-19
PB.10331.4	chr6	-	1397	10	novel_not_in_catalog	AL159163.1	novel	600	8	NA	NA	-460	-71431	any annotated donor/acceptor	FALSE	canonical	1	9009	junction_8	445146.81631594565	NA	0	NA	TRUE	NA	NA	NA	B	coding	218	657	678	1334	60.0	-8	True	AAAAAG	-30
PB.10331.5	chr6	-	4332	9	novel_in_catalog	AL159163.1	novel	600	8	NA	NA	-477	-71431	intron_retention	FALSE	canonical	1	32416	junction_8	387989.99683591636	NA	2	NA	TRUE	NA	NA	NA	B	coding	164	495	3775	4269	60.0	-25	True	AAAAAG	-30
PB.10331.2	chr6	-	4390	10	novel_not_in_catalog	AL159163.1	novel	600	8	NA	NA	-425	-71412	intron_retention	FALSE	canonical	1	3220	junction_3	479118.3518342781	NA	2	NA	TRUE	NA	NA	NA	B	coding	106	321	3723	4043	15.0	0	True	AAAACA	-12
PB.10331.3	chr6	-	1232	9	full-splice_match	RNASET2	ENST00000508775.5	1375	9	135	8	17	4	multi-exon	FALSE	canonical	1	379624	junction_8	309339.3235663458	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	386	1156	30.0	9	True	AAAAAG	-43
PB.10331.1	chr6	-	2205	9	full-splice_match	RNASET2	ENST00000508775.5	1375	9	153	-983	-6	983	multi-exon	FALSE	canonical	1	379624	junction_8	309339.3235663458	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	368	1138	30.0	0	True	NA	NA
PB.700.1	chr12	+	3086	5	full-splice_match	NUDT4	ENST00000337179.9	9753	5	132	6535	119	-690	multi-exon	FALSE	canonical	1	109	junction_4	781.5634971005235	NA	9	NA	TRUE	NA	NA	NA	C	coding	180	543	312	854	30.0	-621	False	TATAAA	-11
PB.10533.2	chr7	-	5070	11	full-splice_match	TBRG4	ENST00000258770.7	2243	11	-10	-2817	-6	2817	multi-exon	FALSE	canonical	1	583406	junction_10	119000.8842536895	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	133	2028	15.0	-28	True	NA	NA
PB.8092.22	chr3	-	3622	14	novel_not_in_catalog	PFKFB4	novel	3586	14	NA	NA	10	-10	any annotated donor/acceptor	FALSE	canonical	1	2718	junction_1	75542.83790401123	NA	2	NA	TRUE	NA	NA	NA	C	coding	453	1362	48	1409	45.0	5075	False	AATAAA	-8
PB.8281.4	chr3	-	6746	19	full-splice_match	CBLB	ENST00000394030.8	6749	19	0	3	0	-3	multi-exon	FALSE	canonical	1	100418	junction_18	38781.02453552112	NA	1	NA	TRUE	NA	NA	NA	C	coding	982	2949	292	3240	30.0	-1	True	TATAAA	-14
PB.11478.11	chr9	+	4825	36	incomplete-splice_match	FOCAD	ENST00000338382.10	5765	43	63358	3	-10655	-3	5prime_fragment	FALSE	canonical	1	132845	junction_3	46127.87007531236	NA	0	NA	TRUE	NA	NA	NA	B	coding	1449	4350	153	4502	5.0	NA	False	AGTAAA	-16
PB.10090.1	chr6	-	2872	1	antisense	novelGene_NT5E_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	24	75	272	346	20.0	-402	False	NA	NA
PB.10066.13	chr6	-	3642	8	novel_not_in_catalog	TMEM30A	novel	4594	7	NA	NA	174	-21	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	370492.69185119274	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	137	1174	70.0	5	True	ATTAAA	-31
PB.8849.2	chr4	+	1893	6	novel_not_in_catalog	ENOPH1	novel	2025	6	NA	NA	17	-1	intron_retention	FALSE	canonical	1	459	junction_3	215734.03162449822	NA	21	2	TRUE	NA	NA	NA	C	coding	136	411	252	662	25.0	-32	True	AATAAA	-15
PB.8849.3	chr4	+	1976	6	full-splice_match	ENOPH1	ENST00000509635.5	1874	6	-67	-35	19	0	multi-exon	FALSE	canonical	1	97911	junction_1	192722.72722893892	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	485	1006	25.0	-30	True	AATAAA	-19
PB.1831.11	chr11	-	3434	22	novel_not_in_catalog	COPB1	novel	510	2	NA	NA	3	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	390398.17632530886	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	263	3124	30.0	-16	True	AATAAA	-15
PB.11647.19	chr9	-	3526	13	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	1166	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	88632.64047785325	NA	1	1	TRUE	NA	NA	NA	B	coding	831	2493	1033	3525	65.0	1	True	NA	NA
PB.8849.4	chr4	+	1766	5	full-splice_match	ENOPH1	ENST00000505846.5	1689	5	-74	-3	26	0	multi-exon	FALSE	canonical	1	60477	junction_2	253766.82020705543	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	449	796	25.0	-23	True	AATAAA	-19
PB.10080.5	chr6	+	2359	2	full-splice_match	TPBG	ENST00000369750.3	6484	2	194	3931	194	-520	multi-exon	FALSE	canonical	1	273065	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	424	1686	90.0	8	True	AATAAA	-31
PB.10533.3	chr7	-	4436	9	full-splice_match	TBRG4	ENST00000361278.7	1917	9	-1	-2518	-1	2518	multi-exon	FALSE	canonical	1	66594	junction_6	261325.02473569073	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	128	1693	30.0	-23	True	NA	NA
PB.10080.6	chr6	+	2387	2	full-splice_match	TPBG	ENST00000543496.3	2881	2	-26	520	-26	-520	multi-exon	FALSE	canonical	1	50901	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	452	1714	90.0	-2256	False	AATAAA	-31
PB.10080.1	chr6	+	2941	2	full-splice_match	TPBG	ENST00000369750.3	6484	2	129	3414	129	-3	multi-exon	FALSE	canonical	1	273065	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	420	1263	489	1751	45.0	-2714	False	NA	NA
PB.10080.3	chr6	+	2252	2	full-splice_match	TPBG	ENST00000369750.3	6484	2	176	4056	176	-645	multi-exon	FALSE	canonical	1	273065	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	442	1704	50.0	-2667	False	NA	NA
PB.10066.14	chr6	-	6185	6	novel_in_catalog	TMEM30A	novel	4594	7	NA	NA	163	-21	intron_retention	FALSE	canonical	1	945065	junction_2	63863.900513513894	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	148	1080	70.0	-6	True	ATTAAA	-31
PB.2582.6	chr12	-	1522	6	full-splice_match	FKBP11	ENST00000453172.2	959	6	0	-563	0	2	multi-exon	FALSE	canonical	1	101967	junction_1	274351.1438736861	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	93	533	25.0	26	False	TTTAAA	-34
PB.5079.1	chr17	-	2423	5	full-splice_match	CBX1	ENST00000393408.7	2422	5	-2	1	-2	-1	multi-exon	FALSE	canonical	1	40263	junction_4	101140.22516536138	NA	2	1	TRUE	NA	NA	NA	C	coding	185	558	484	1041	20.0	-15	True	AATAAA	-22
PB.2582.4	chr12	-	2061	6	full-splice_match	FKBP11	ENST00000453172.2	959	6	-8	-1094	-8	-55	multi-exon	FALSE	canonical	1	101967	junction_1	274351.1438736861	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	101	541	60.0	18	False	AATAGA	-13
PB.2582.5	chr12	-	2005	5	novel_in_catalog	AC073610.3	novel	939	5	NA	NA	32389	-18493	no_combination_of_known_junctions	FALSE	canonical	1	41144	junction_4	373942.1883289581	NA	2	NA	TRUE	NA	NA	NA	B	coding	44	135	315	449	75.0	0	True	AAAAAG	-31
PB.2582.2	chr12	-	2663	4	novel_in_catalog	AC073610.3	novel	939	5	NA	NA	31845	-18493	intron_retention	FALSE	canonical	1	670229	junction_3	70140.36324558222	NA	2	NA	TRUE	NA	NA	NA	B	coding	82	249	93	341	75.0	26	False	AAAAAG	-31
PB.2582.3	chr12	-	2640	4	full-splice_match	FKBP11	ENST00000551694.5	2661	4	-14	35	-4	-19	multi-exon	FALSE	canonical	1	670229	junction_3	61170.60376248273	NA	2	NA	TRUE	NA	NA	NA	C	coding	106	321	97	417	75.0	22	False	AAAAAG	-31
PB.2582.1	chr12	-	3532	1	full-splice_match	FKBP11	ENST00000553027.1	4957	1	947	478	-7	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	122	369	1212	1580	75.0	19	False	AAAAAG	-31
PB.818.10	chr1	+	2979	14	novel_not_in_catalog	SEMA4A	novel	1057	9	NA	NA	179	2	intron_retention	FALSE	non_canonical	0	0	junction_10	66059.44180928147	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	30	1289	10.0	2	True	ATTAAA	-16
PB.8281.3	chr3	-	6442	18	novel_in_catalog	CBLB	novel	6749	19	NA	NA	-3	-2	combination_of_known_junctions	TRUE	canonical	1	40574	junction_3	50251.38670599482	NA	1	NA	TRUE	NA	NA	NA	C	coding	938	2817	119	2935	30.0	-4	True	TATAAA	-15
PB.11744.8	chr9	-	3235	11	full-splice_match	AKNA	ENST00000312033.3	3334	11	99	0	-19	0	multi-exon	FALSE	canonical	1	111053	junction_10	74718.17925940112	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	237	2732	95.0	-2	True	NA	NA
PB.851.8	chr1	+	2733	17	novel_not_in_catalog	NCSTN	novel	2936	17	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	4612	junction_15	302215.0736472638	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	15	1838	25.0	-3	True	ATTAAA	-15
PB.10066.19	chr6	-	2860	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	188	1546	168	129	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	4	NA	TRUE	NA	NA	NA	C	coding	361	1086	143	1228	30.0	-1	True	NA	NA
PB.10066.18	chr6	-	3530	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	139	925	119	-236	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	192	1277	60.0	0	True	NA	NA
PB.2219.1	chr11	+	2003	1	full-splice_match	AP002364.1	ENST00000623330.1	3386	1	-38	1421	-38	-1421	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-52	False	AATAAA	-13
PB.1831.18	chr11	-	2742	19	incomplete-splice_match	COPB1	ENST00000439561.6	3382	22	51	3645	2	-1179	3prime_fragment	FALSE	canonical	1	431700	junction_18	291340.6370878691	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2547	196	2742	40.0	-1	True	NA	NA
PB.8823.5	chr4	+	2339	3	novel_in_catalog	PARM1	novel	4308	3	NA	NA	-45	-2659	no_combination_of_known_junctions	FALSE	canonical	1	2301	junction_2	108393.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	279	1211	30.0	-1976	False	AATAAA	-45
PB.11013.6	chr8	+	5245	15	novel_in_catalog	FAM160B2	novel	917	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	78570	junction_1	84431.01749372389	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	1408	2730	10.0	12	True	AATAAA	-17
PB.11072.1	chr8	+	2095	7	full-splice_match	DCTN6	ENST00000221114.7	1127	7	19	-987	-3	987	multi-exon	FALSE	canonical	1	338551	junction_6	133313.3528941827	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	69	641	20.0	-53	False	GATAAA	-36
PB.8281.8	chr3	-	3939	19	full-splice_match	CBLB	ENST00000394030.8	6749	19	0	2810	0	-2	multi-exon	FALSE	canonical	1	100418	junction_18	38781.02453552112	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	292	3240	30.0	-1	True	AATAAA	-27
PB.8788.1	chr4	+	5466	26	full-splice_match	CEP135	ENST00000257287.4	5562	26	-172	268	-62	-9	multi-exon	TRUE	canonical	1	50921	junction_1	19441.03792702437	NA	3	NA	TRUE	NA	NA	NA	C	coding	1140	3423	297	3719	70.0	-14	True	AATAAA	-8
PB.11072.2	chr8	+	2636	7	full-splice_match	DCTN6	ENST00000221114.7	1127	7	55	-1564	-17	1564	multi-exon	FALSE	canonical	1	338551	junction_6	133313.3528941827	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	33	605	25.0	1	True	NA	NA
PB.8001.13	chr3	-	1935	10	incomplete-splice_match	GLB1	ENST00000307363.9	2616	16	79	48711	-5	287	3prime_fragment	FALSE	canonical	1	379958	junction_9	83999.45572413322	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	67	1188	25.0	-6	True	AATAAA	-9
PB.8281.9	chr3	-	3510	18	novel_in_catalog	CBLB	novel	6749	19	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	40574	junction_3	50251.38670599482	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	129	2945	70.0	-14	True	NA	NA
PB.5065.5	chr17	-	5725	19	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-1	-10	combination_of_known_junctions	FALSE	canonical	1	26970	junction_2	147000.5170187431	NA	13	1	TRUE	NA	NA	NA	C	coding	768	2307	96	2402	50.0	3	True	AATAAA	-8
PB.5065.4	chr17	-	5819	19	full-splice_match	CDC27	ENST00000527547.5	2579	19	-71	-3169	-29	-8	multi-exon	FALSE	canonical	1	62581	junction_12	147705.2233235566	NA	1	NA	TRUE	NA	NA	NA	C	coding	823	2472	124	2595	50.0	-25	True	AATAAA	-10
PB.5065.1	chr17	-	5736	20	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	-5	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	158340.21301933477	NA	2	NA	TRUE	NA	NA	NA	C	coding	829	2490	100	2589	45.0	-1	True	AATAAA	-11
PB.5065.9	chr17	-	5590	19	novel_not_in_catalog	CDC27	novel	5801	19	NA	NA	-35	-244	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	156340.40659770527	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	130	1530	45.0	-31	True	ATTAAA	-16
PB.5065.8	chr17	-	5691	18	novel_in_catalog	CDC27	novel	5801	19	NA	NA	-29	-244	intron_retention	FALSE	canonical	1	62581	junction_12	152495.27925170457	NA	7	NA	TRUE	NA	NA	NA	C	coding	427	1284	1420	2703	45.0	-25	True	ATTAAA	-16
PB.1010.3	chr1	+	2304	10	novel_in_catalog	TROVE2	novel	2143	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	17490	junction_1	141216.62265662357	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	553	2169	85.0	-40	True	AATGAA	-44
PB.1010.2	chr1	+	1902	9	full-splice_match	TROVE2	ENST00000400968.6	2143	9	226	15	-11	0	multi-exon	FALSE	canonical	1	83928	junction_1	98963.92726740133	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	151	1767	85.0	13	True	AATGAA	-44
PB.1010.1	chr1	+	3905	2	full-splice_match	TROVE2	ENST00000469214.2	592	2	-15	-3298	-15	3298	multi-exon	FALSE	canonical	1	17490	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-117	False	NA	NA
PB.1010.7	chr1	+	3083	9	full-splice_match	TROVE2	ENST00000400968.6	2143	9	163	-1103	-10	-1	multi-exon	FALSE	canonical	1	83928	junction_1	98963.92726740133	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	214	1830	25.0	-112	False	ATTAAA	-19
PB.1010.6	chr1	+	2405	1	novel_in_catalog	TROVE2	novel	2143	9	NA	NA	-16	1700	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	38	117	274	390	80.0	6	True	NA	NA
PB.1010.5	chr1	+	1803	8	full-splice_match	TROVE2	ENST00000432079.5	7848	8	120	5925	-21	59	multi-exon	FALSE	canonical	1	49081	junction_1	115652.87672273826	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	449	1240	35.0	1	True	NA	NA
PB.3885.10	chr15	-	1464	8	full-splice_match	CCPG1	ENST00000310958.10	6822	8	93	5265	-46	-1497	multi-exon	FALSE	canonical	1	323777	junction_7	93981.48656050536	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1257	207	1463	65.0	-59	False	NA	NA
PB.1010.9	chr1	+	2472	8	full-splice_match	TROVE2	ENST00000432079.5	7848	8	141	5235	0	-1	multi-exon	FALSE	canonical	1	49081	junction_1	115652.87672273826	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	428	1219	25.0	-40	True	ATTAAA	-19
PB.1010.8	chr1	+	1356	8	full-splice_match	TROVE2	ENST00000432079.5	7848	8	139	6353	-2	0	multi-exon	FALSE	canonical	1	49081	junction_1	115652.87672273826	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	430	1221	85.0	-42	True	AATGAA	-44
PB.6320.16	chr2	+	3939	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	199	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	144367.6415737112	NA	2	NA	TRUE	NA	NA	NA	C	coding	343	1032	976	2007	35.0	2	True	AATAAA	-14
PB.7837.5	chr22	-	2251	8	novel_not_in_catalog	RRP7A	novel	3801	7	NA	NA	-1	-967	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	343944.6209335783	NA	13	NA	TRUE	NA	NA	NA	C	coding	280	843	18	860	30.0	-10	True	NA	NA
PB.2310.1	chr11	+	2824	2	full-splice_match	CXCR5	ENST00000292174.4	4431	2	70	1537	70	-1537	multi-exon	FALSE	canonical	1	49450	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	372	1119	107	1225	30.0	2	True	AATAAA	-20
PB.6447.3	chr2	+	5738	15	full-splice_match	PRKCE	ENST00000306156.7	5650	15	-89	1	-89	-1	multi-exon	FALSE	canonical	1	63780	junction_1	17963.414581548004	NA	2	NA	TRUE	NA	NA	NA	C	coding	737	2214	417	2630	40.0	10	True	AATAAA	-20
PB.6447.1	chr2	+	3441	15	full-splice_match	PRKCE	ENST00000306156.7	5650	15	-561	2770	-132	-2770	multi-exon	FALSE	canonical	1	63780	junction_1	17963.414581548004	NA	2	NA	TRUE	NA	NA	NA	C	coding	737	2214	889	3102	75.0	-8639	False	GGGGCT	-42
PB.11379.4	chr8	-	2621	5	novel_in_catalog	PYCR3	novel	2678	6	NA	NA	11	-13	intron_retention	FALSE	canonical	1	101862	junction_4	35211.34658299083	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	740	1153	25.0	8444	False	AATAAA	-21
PB.11093.16	chr8	-	1576	3	full-splice_match	PLPP5	ENST00000528814.1	1590	3	27	-13	-2	-8	multi-exon	FALSE	canonical	1	260765	junction_2	84311.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	5	325	30.0	10	True	NA	NA
PB.12093.14	chrX	-	6111	33	novel_in_catalog	HUWE1	novel	4805	18	NA	NA	-14263	346	combination_of_known_junctions	FALSE	canonical	1	287157	junction_11	312837.0336145233	NA	0	NA	TRUE	NA	NA	NA	B	coding	1977	5934	65	5998	20.0	NA	False	AATAAA	-12
PB.12093.12	chrX	-	6231	34	incomplete-splice_match	HUWE1	ENST00000612484.4	14311	81	89513	1099	-15089	347	5prime_fragment	FALSE	canonical	1	496632	junction_23	292357.51345435606	NA	1	NA	TRUE	NA	NA	NA	B	coding	2033	6102	16	6117	15.0	NA	False	AATAAA	-13
PB.7146.5	chr20	-	1139	9	full-splice_match	DDRGK1	ENST00000354488.7	1306	9	-4	171	-4	-1	multi-exon	FALSE	canonical	1	436191	junction_8	272254.4854955332	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	63	1007	5.0	-10	True	ATTAAA	-19
PB.3128.1	chr13	-	3161	1	full-splice_match	KBTBD7	ENST00000379483.3	4734	1	-2	1575	-2	-1575	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	684	2055	312	2366	85.0	0	True	ATTAAA	-15
PB.3128.2	chr13	-	2993	1	full-splice_match	KBTBD7	ENST00000379483.3	4734	1	0	1741	0	-1741	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	684	2055	310	2364	100.0	2	True	NA	NA
PB.11379.1	chr8	-	3335	6	full-splice_match	PYCR3	ENST00000220966.10	2678	6	35	-692	-5	692	multi-exon	FALSE	canonical	1	101862	junction_5	34987.76904576798	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	32	856	30.0	-5	True	TTTAAA	-26
PB.1067.10	chr1	-	2738	2	novel_not_in_catalog	NUCKS1	novel	6496	7	NA	NA	1539	-26198	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	1506	False	NA	NA
PB.11885.5	chr9	-	2221	10	full-splice_match	SLC2A6	ENST00000371899.8	2528	10	1	306	1	-306	multi-exon	FALSE	canonical	1	117906	junction_6	20579.332691433203	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	78	1601	55.0	-1	True	NA	NA
PB.11885.4	chr9	-	2386	10	full-splice_match	SLC2A6	ENST00000371899.8	2528	10	4	138	4	-138	multi-exon	FALSE	canonical	1	117906	junction_6	20579.332691433203	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	75	1598	90.0	2	True	NA	NA
PB.10585.1	chr7	-	3098	14	full-splice_match	TYW1B	ENST00000620995.4	3113	14	12	3	0	-3	multi-exon	FALSE	canonical	1	3046	junction_5	14468.387956887453	NA	1	NA	TRUE	NA	NA	NA	A	coding	668	2007	112	2118	35.0	-5	True	AATAAA	-13
PB.11885.2	chr9	-	2546	10	novel_not_in_catalog	SLC2A6	novel	2301	9	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	1722	junction_3	49281.8719336426	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	78	1364	35.0	-1	True	AATAAA	-15
PB.11885.1	chr9	-	2545	10	full-splice_match	SLC2A6	ENST00000371899.8	2528	10	-8	-9	-8	9	multi-exon	FALSE	canonical	1	117906	junction_6	20579.332691433203	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	87	1610	30.0	-10	False	AATAAA	-24
PB.7175.6	chr20	+	4180	5	full-splice_match	BTBD3	ENST00000254977.7	4686	5	106	400	1	-381	multi-exon	FALSE	canonical	1	99282	junction_1	103253.3914321946	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	252	1637	20.0	-4	True	TATAAA	-43
PB.12146.1	chrX	+	2286	1	antisense	novelGene_RLIM_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1685.1	chr10	-	561	1	full-splice_match	RPL21P16	ENST00000495531.1	483	1	-40	-38	-40	38	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	160	483	41	523	95.0	1	False	AATAAA	-16
PB.7381.39	chr20	+	2367	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	0	626	intron_retention	FALSE	canonical	1	42049	junction_5	293911.2356525445	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	725	1546	40.0	0	True	ATTAAA	-22
PB.7146.3	chr20	-	2992	9	novel_not_in_catalog	DDRGK1	novel	865	2	NA	NA	-8	1561	any annotated donor/acceptor	FALSE	canonical	1	23503	junction_2	384567.4630175236	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	67	1128	75.0	-14	True	ATTAAA	-42
PB.12245.1	chrX	+	3927	2	full-splice_match	ZBTB33	ENST00000326624.2	5211	2	-34	1318	-34	-1318	multi-exon	FALSE	canonical	1	88989	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	263	2281	50.0	0	True	NA	NA
PB.12245.2	chrX	+	4883	2	full-splice_match	ZBTB33	ENST00000326624.2	5211	2	64	264	61	-264	multi-exon	FALSE	canonical	1	88989	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	165	2183	70.0	4	True	AAGAAA	-29
PB.12245.3	chrX	+	5162	3	full-splice_match	ZBTB33	ENST00000557385.1	2346	3	146	-2962	146	-2	multi-exon	FALSE	canonical	1	9232	junction_1	2116.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	182	2200	10.0	-2	True	AATAAA	-14
PB.12245.4	chrX	+	4274	3	novel_not_in_catalog	ZBTB33	novel	5211	2	NA	NA	53	-1	any annotated donor/acceptor	FALSE	canonical	1	1090	junction_2	43949.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	415	1311	15.0	-4	True	AATAAA	-15
PB.12245.5	chrX	+	5148	2	full-splice_match	ZBTB33	ENST00000326624.2	5211	2	62	1	59	-1	multi-exon	FALSE	canonical	1	88989	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	167	2185	15.0	2	True	AATAAA	-15
PB.12245.6	chrX	+	3695	2	full-splice_match	ZBTB33	ENST00000326624.2	5211	2	65	1451	62	-1451	multi-exon	FALSE	canonical	1	88989	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	164	2182	45.0	5	True	AATATA	-19
PB.12245.7	chrX	+	4409	2	full-splice_match	ZBTB33	ENST00000326624.2	5211	2	75	727	72	-727	multi-exon	FALSE	canonical	1	88989	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	672	2019	154	2172	15.0	15	True	ATTAAA	-25
PB.2968.21	chr12	-	2320	16	novel_in_catalog	ANAPC5	novel	2627	10	NA	NA	-4	120	combination_of_known_junctions	FALSE	canonical	1	4406	junction_1	438153.6413370492	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	82	1998	35.0	-14	True	NA	NA
PB.2968.20	chr12	-	3140	16	novel_not_in_catalog	ANAPC5	novel	1141	2	NA	NA	9	-3	intron_retention	FALSE	canonical	1	800	junction_9	460774.47870078724	NA	2	NA	TRUE	NA	NA	NA	C	coding	421	1266	1756	3021	15.0	-1	True	AATAAA	-11
PB.2968.23	chr12	-	3004	8	novel_in_catalog	ANAPC5	novel	2627	10	NA	NA	9	-634	intron_retention	FALSE	canonical	1	716022	junction_7	170603.66559104773	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	1347	2075	85.0	-1	True	NA	NA
PB.2968.22	chr12	-	2384	16	novel_not_in_catalog	ANAPC5	novel	2627	10	NA	NA	22	114	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	404424.9623688539	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	101	2068	40.0	-1	True	NA	NA
PB.11211.7	chr8	-	1812	8	full-splice_match	ZFAND1	ENST00000220669.9	1798	8	-5	-9	-5	8	multi-exon	FALSE	canonical	1	273320	junction_5	107647.09118718082	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	25	831	20.0	-6	True	AATAAA	-22
PB.10599.2	chr7	-	2205	10	novel_in_catalog	STX1A	novel	2095	10	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	1	80294	junction_2	69332.53888932314	NA	0	NA	TRUE	NA	NA	NA	B	coding	260	783	53	835	20.0	-15	True	AATAAA	-13
PB.10599.1	chr7	-	3968	10	novel_not_in_catalog	STX1A	novel	2095	10	NA	NA	1	-6	any annotated donor/acceptor	TRUE	canonical	1	104	junction_2	92317.7339888686	NA	0	NA	TRUE	NA	NA	NA	B	coding	329	990	41	1030	20.0	-3	True	AATAAA	-13
PB.8711.10	chr4	-	2015	2	full-splice_match	DCAF16	ENST00000507768.1	757	2	11	-1269	11	1269	multi-exon	FALSE	canonical	1	20628	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	917	1567	75.0	-19	True	NA	NA
PB.8711.11	chr4	-	1991	3	full-splice_match	DCAF16	ENST00000382247.5	4548	3	7	2550	7	1107	multi-exon	FALSE	canonical	1	103283	junction_2	27689.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	1055	1705	65.0	-23	True	NA	NA
PB.8711.12	chr4	-	5656	1	genic	DCAF16	novel	NA	NA	NA	NA	-2	-793	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-32	True	NA	NA
PB.8711.13	chr4	-	2961	2	full-splice_match	DCAF16	ENST00000507731.1	533	2	-41	-2387	6	2387	multi-exon	FALSE	canonical	1	35413	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-24	True	ATTAAA	-15
PB.5430.5	chr18	+	3754	15	full-splice_match	TAF4B	ENST00000269142.9	5260	15	509	997	-41	524	multi-exon	FALSE	canonical	1	28707	junction_12	67960.97379772978	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	490	3078	60.0	0	True	NA	NA
PB.5430.4	chr18	+	2292	9	incomplete-splice_match	TAF4B	ENST00000418698.3	4431	16	-447	98190	-50	-96671	3prime_fragment	FALSE	canonical	1	41525	junction_7	83385.71985798512	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1794	499	2292	75.0	-9	True	AATAAA	-31
PB.5430.6	chr18	+	4527	15	full-splice_match	TAF4B	ENST00000269142.9	5260	15	727	6	177	-4	multi-exon	FALSE	canonical	1	28707	junction_12	67960.97379772978	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	272	2860	35.0	100	False	ATTAAA	-16
PB.5430.1	chr18	+	4296	15	full-splice_match	TAF4B	ENST00000269142.9	5260	15	637	327	87	-325	multi-exon	FALSE	canonical	1	28707	junction_12	67960.97379772978	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	362	2950	80.0	10	True	NA	NA
PB.5430.3	chr18	+	4291	15	full-splice_match	TAF4B	ENST00000269142.9	5260	15	496	473	-54	-471	multi-exon	FALSE	canonical	1	28707	junction_12	67960.97379772978	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	503	3091	90.0	-13	True	NA	NA
PB.5430.2	chr18	+	4708	15	novel_not_in_catalog	TAF4B	novel	5260	15	NA	NA	-56	-3	any annotated donor/acceptor	FALSE	canonical	1	5164	junction_1	70310.57915975811	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1827	1214	3040	35.0	-15	True	ATTAAA	-17
PB.1258.3	chr1	+	2780	4	full-splice_match	ZNF672	ENST00000306562.7	2989	4	208	1	157	-1	multi-exon	FALSE	canonical	1	209401	junction_1	57376.04347344514	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	539	1897	20.0	64	False	AATAAA	-17
PB.9556.1	chr5	+	7492	4	novel_not_in_catalog	SLC26A2	novel	8080	3	NA	NA	2	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	62386.82382433721	NA	2	NA	TRUE	NA	NA	NA	C	coding	739	2220	267	2486	30.0	-23	True	AATAAA	-20
PB.860.9	chr1	+	1092	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-17	1614	1	961	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	55	1062	60.0	1	True	NA	NA
PB.9556.2	chr5	+	3566	3	full-splice_match	SLC26A2	ENST00000286298.4	8080	3	130	4384	82	-4384	multi-exon	FALSE	canonical	1	112449	junction_1	16695.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	139	2358	80.0	-47	False	NA	NA
PB.10916.4	chr7	+	3804	17	full-splice_match	KRBA1	ENST00000496259.5	3763	17	-44	3	-44	-3	multi-exon	FALSE	canonical	1	14545	junction_1	16225.429662550541	NA	3	NA	TRUE	NA	NA	NA	C	coding	1064	3195	89	3283	25.0	14	True	ATTAAA	-13
PB.9556.3	chr5	+	3445	4	novel_not_in_catalog	SLC26A2	novel	8080	3	NA	NA	98	-4386	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	62386.82382433721	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	123	2342	80.0	0	True	NA	NA
PB.5420.2	chr18	+	2492	10	full-splice_match	CABLES1	ENST00000256925.11	5002	10	697	1813	1	0	multi-exon	FALSE	canonical	1	99446	junction_1	50775.94577803865	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	285	1205	15.0	938	False	ATTAAA	-20
PB.5420.3	chr18	+	4534	10	full-splice_match	CABLES1	ENST00000256925.11	5002	10	470	-2	-191	2	multi-exon	FALSE	canonical	1	99446	junction_1	50775.94577803865	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	512	1432	10.0	711	False	AATAAA	-16
PB.5420.1	chr18	+	2427	10	novel_in_catalog	CABLES1	novel	1544	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	355	junction_1	75678.0142985586	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	224	1144	15.0	1	True	ATTAAA	-16
PB.9.1	chr1	+	631	2	full-splice_match	ISG15	ENST00000649529.1	637	2	-3	9	-3	-9	multi-exon	FALSE	canonical	1	2600139	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	165	498	81	578	35.0	-3	True	AATAAA	-10
PB.11238.3	chr8	+	3970	2	full-splice_match	PDP1	ENST00000297598.4	4272	2	46	256	-33	-256	multi-exon	FALSE	canonical	1	141776	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	224	1837	25.0	-25	True	ATTAAA	-23
PB.11238.2	chr8	+	4196	2	full-splice_match	PDP1	ENST00000297598.4	4272	2	79	-3	0	-1	multi-exon	FALSE	canonical	1	141776	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	191	1804	10.0	8	True	ATTAAA	-19
PB.11238.5	chr8	+	4321	3	novel_not_in_catalog	PDP1	novel	510	2	NA	NA	-21	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	48020.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	242	1930	10.0	-13	True	ATTAAA	-18
PB.11238.4	chr8	+	4396	3	full-splice_match	PDP1	ENST00000396200.3	4358	3	-38	0	-25	0	multi-exon	FALSE	canonical	1	1474	junction_1	47283.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	315	2003	10.0	-17	True	ATTAAA	-20
PB.11238.7	chr8	+	3127	3	full-splice_match	PDP1	ENST00000520728.5	2554	3	-8	-565	-8	565	multi-exon	FALSE	canonical	1	33876	junction_1	31082.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	562	1689	159	1847	25.0	0	True	AATAAA	-16
PB.11238.6	chr8	+	2555	3	full-splice_match	PDP1	ENST00000520728.5	2554	3	-16	15	-16	-15	multi-exon	FALSE	canonical	1	33876	junction_1	31082.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	167	1855	70.0	-8	True	NA	NA
PB.11238.9	chr8	+	4335	2	full-splice_match	PDP1	ENST00000518573.1	596	2	-117	-3622	0	-1	multi-exon	FALSE	canonical	1	5783	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	330	1943	10.0	8	True	ATTAAA	-19
PB.11238.8	chr8	+	3975	3	full-splice_match	PDP1	ENST00000520728.5	2554	3	-7	-1414	-7	-260	multi-exon	FALSE	canonical	1	33876	junction_1	31082.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	158	1846	20.0	1	True	ATTAAA	-19
PB.947.1	chr1	-	5252	20	novel_in_catalog	RC3H1	novel	10988	19	NA	NA	-68	1117	combination_of_known_junctions	TRUE	canonical	1	50149	junction_19	31280.01630496348	NA	2	NA	TRUE	NA	NA	NA	B	coding	1134	3405	421	3825	5.0	-12	True	AGTAAA	-18
PB.5324.11	chr17	+	2883	22	full-splice_match	HGS	ENST00000329138.8	2970	22	79	8	-22	-4	multi-exon	FALSE	canonical	1	572223	junction_1	131863.61578201386	NA	9	2	TRUE	NA	NA	NA	C	coding	777	2334	57	2390	30.0	0	True	AATAAA	-8
PB.5324.10	chr17	+	4389	21	novel_in_catalog	HGS	novel	644	5	NA	NA	-23	0	intron_retention	FALSE	canonical	1	680156	junction_17	118983.08908752538	NA	3	NA	TRUE	NA	NA	NA	C	coding	771	2316	1577	3892	25.0	-1	True	AATAAA	-12
PB.5324.13	chr17	+	2958	21	novel_in_catalog	HGS	novel	644	5	NA	NA	-17	0	intron_retention	FALSE	canonical	1	572223	junction_1	134609.5192832216	NA	1	NA	TRUE	NA	NA	NA	C	coding	652	1959	52	2010	25.0	5	True	AATAAA	-12
PB.5324.12	chr17	+	2838	21	novel_in_catalog	HGS	novel	644	5	NA	NA	-21	1	no_combination_of_known_junctions	FALSE	canonical	1	21424	junction_5	226031.16583335915	NA	1	NA	TRUE	NA	NA	NA	C	coding	602	1809	528	2336	20.0	1	True	AATAAA	-17
PB.3933.1	chr15	+	1236	11	full-splice_match	HACD3	ENST00000261875.9	3228	11	-4	1996	-4	-143	multi-exon	TRUE	canonical	1	778285	junction_7	108699.03351589653	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1065	171	1235	70.0	-53	True	TATAAA	-23
PB.10490.3	chr7	+	2307	2	full-splice_match	EPDR1	ENST00000423717.1	638	2	-16	-1653	-16	-2	multi-exon	FALSE	canonical	1	25748	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	90	273	299	571	25.0	-23	True	AATAAA	-27
PB.3933.3	chr15	+	1398	11	full-splice_match	HACD3	ENST00000261875.9	3228	11	-3	1833	-3	20	multi-exon	FALSE	canonical	1	778285	junction_7	108699.03351589653	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	170	1258	25.0	-52	True	ATTAAA	-36
PB.3933.2	chr15	+	3346	12	full-splice_match	HACD3	ENST00000565299.5	1465	12	-28	-1853	-4	0	multi-exon	FALSE	canonical	1	1492	junction_1	371765.5834081382	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	171	1373	35.0	-53	True	ATTAAA	-20
PB.3933.5	chr15	+	2138	11	full-splice_match	HACD3	ENST00000261875.9	3228	11	0	1090	0	200	multi-exon	FALSE	canonical	1	778285	junction_7	108699.03351589653	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	167	1255	70.0	-49	True	NA	NA
PB.1055.9	chr1	-	3164	2	full-splice_match	PPP1R15B	ENST00000367188.4	5227	2	-56	2119	-56	-2119	multi-exon	FALSE	canonical	1	527994	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	437	2578	30.0	-1	True	NA	NA
PB.3933.7	chr15	+	3197	11	full-splice_match	HACD3	ENST00000261875.9	3228	11	31	0	7	0	multi-exon	FALSE	canonical	1	778285	junction_7	108699.03351589653	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	136	1224	35.0	-18	True	ATTAAA	-20
PB.3933.6	chr15	+	3106	10	novel_in_catalog	HACD3	novel	1797	13	NA	NA	-4	1	no_combination_of_known_junctions	FALSE	canonical	1	6899	junction_5	310120.9662640422	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	155	1132	40.0	-37	True	ATTAAA	-21
PB.8853.22	chr4	-	4170	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	54702	junction_7	392774.4230880621	NA	0	NA	TRUE	NA	NA	NA	C	coding	1212	3639	120	3758	20.0	9363	False	ATTAAA	-13
PB.8853.23	chr4	-	4161	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	31517	junction_15	370852.37421202025	NA	4	NA	TRUE	NA	NA	NA	C	coding	1220	3663	87	3749	20.0	-28	True	ATTAAA	-13
PB.6992.1	chr2	-	1870	8	full-splice_match	PECR	ENST00000265322.7	1853	8	4	-21	4	21	multi-exon	FALSE	canonical	1	127016	junction_7	23705.214079848098	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	72	983	10.0	-4	True	TATAAA	-37
PB.6992.3	chr2	-	1462	8	full-splice_match	PECR	ENST00000265322.7	1853	8	-4	395	-4	-395	multi-exon	FALSE	canonical	1	127016	junction_7	23705.214079848098	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	80	991	85.0	-12	True	NA	NA
PB.6992.2	chr2	-	1639	8	full-splice_match	PECR	ENST00000265322.7	1853	8	-6	220	-6	-220	multi-exon	FALSE	canonical	1	127016	junction_7	23705.214079848098	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	82	993	80.0	-14	True	NA	NA
PB.11346.12	chr8	+	3639	7	incomplete-splice_match	PHF20L1	ENST00000337920.8	2311	8	-21	4998	3	-3766	3prime_fragment	FALSE	canonical	1	98842	junction_1	77338.58109565296	NA	3	NA	TRUE	NA	NA	NA	C	coding	260	783	293	1075	40.0	-1	True	AATAAA	-14
PB.8853.20	chr4	-	4207	28	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	133055	junction_6	337050.2973022599	NA	1	NA	TRUE	NA	NA	NA	C	coding	1233	3702	94	3795	20.0	-35	True	ATTAAA	-13
PB.6765.1	chr2	+	2506	14	full-splice_match	ARHGAP15	ENST00000295095.10	1775	14	16	-747	16	747	multi-exon	TRUE	canonical	1	208470	junction_1	41230.115106177414	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	152	1579	40.0	0	True	ATTAAA	-10
PB.7837.3	chr22	-	2835	7	full-splice_match	RRP7A	ENST00000323013.6	3801	7	-1	967	-1	-967	multi-exon	FALSE	canonical	1	9975	junction_2	291903.20223858266	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	18	860	30.0	-10	True	NA	NA
PB.6765.3	chr2	+	2065	12	incomplete-splice_match	ARHGAP15	ENST00000295095.10	1775	14	93	143232	-6	853	3prime_fragment	FALSE	canonical	1	208470	junction_1	43611.69380258669	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	75	1244	75.0	-12	True	AAAAAG	-28
PB.1090.18	chr1	+	3172	12	full-splice_match	CD46	ENST00000367041.5	3281	12	106	3	40	-3	multi-exon	FALSE	canonical	1	476104	junction_6	454627.7971684071	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	51	1139	20.0	-1	True	AATAAA	-21
PB.6821.10	chr2	-	2459	12	incomplete-splice_match	FASTKD1	ENST00000453929.6	2791	14	-74	1716	-31	-1639	3prime_fragment	FALSE	canonical	1	51887	junction_9	69575.4088250551	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2037	423	2459	55.0	0	True	NA	NA
PB.8637.7	chr3	+	2079	9	full-splice_match	FYTTD1	ENST00000241502.8	6866	9	176	4611	-12	605	multi-exon	FALSE	canonical	1	460748	junction_1	75768.27768103218	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	47	1003	65.0	40	True	AATATA	-19
PB.6765.2	chr2	+	2761	15	novel_not_in_catalog	ARHGAP15	novel	2968	7	NA	NA	46	0	any annotated donor/acceptor	FALSE	canonical	1	1673	junction_14	108309.59086089321	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	122	1501	20.0	-4	True	AATAAA	-10
PB.713.3	chr1	-	3367	5	novel_in_catalog	SF3B4	novel	2085	6	NA	NA	-216	-2	intron_retention	FALSE	canonical	1	240907	junction_2	192110.68426479434	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	49	1143	5.0	-5	True	AATAAA	-16
PB.6730.2	chr2	+	2315	1	full-splice_match	SFT2D3	ENST00000310981.5	3735	1	5	1415	5	-1415	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	215	648	17	664	25.0	16	True	AATAAA	-10
PB.713.2	chr1	-	3945	3	novel_in_catalog	SF3B4	novel	2085	6	NA	NA	-214	-2	intron_retention	FALSE	canonical	1	698623	junction_2	8552.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	513	1016	5.0	-3	True	AATAAA	-16
PB.6821.12	chr2	-	2227	5	incomplete-splice_match	FASTKD1	ENST00000453929.6	2791	14	-12	29694	-12	822	3prime_fragment	FALSE	canonical	1	51887	junction_2	23337.964489217993	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	361	1293	85.0	-1	True	NA	NA
PB.2330.3	chr11	+	2710	8	full-splice_match	TBCEL	ENST00000422003.6	5142	8	2	2430	2	0	multi-exon	FALSE	canonical	1	34106	junction_1	48249.68417365178	NA	7	1	TRUE	NA	NA	NA	C	coding	424	1275	187	1461	35.0	10	True	AGTAAA	-20
PB.2330.2	chr11	+	4012	8	full-splice_match	TBCEL	ENST00000422003.6	5142	8	-35	1165	-7	3	multi-exon	FALSE	canonical	1	34106	junction_1	48249.68417365178	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	224	1498	40.0	-27	True	AATAAA	-18
PB.8810.1	chr4	+	1649	1	full-splice_match	UTP3	ENST00000254803.3	2073	1	51	373	51	-373	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	479	1440	149	1588	40.0	-2	True	AATAAA	-17
PB.8129.2	chr3	+	1612	9	full-splice_match	GNAI2	ENST00000313601.10	2464	9	376	476	124	-14	multi-exon	FALSE	canonical	1	2369579	junction_8	896619.6991643026	NA	0	NA	TRUE	NA	NA	NA	C	coding	355	1068	9	1076	70.0	124	False	NA	NA
PB.11646.58	chr9	-	1496	1	novel_in_catalog	IARS	novel	4656	34	NA	NA	-1	-4377	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-2	True	NA	NA
PB.11988.5	chrX	-	1832	12	full-splice_match	RBBP7	ENST00000380087.6	2333	12	183	318	-78	-5	multi-exon	FALSE	canonical	1	1349936	junction_10	314505.3651904897	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	179	1456	40.0	5034	False	AATAAA	-6
PB.7381.37	chr20	+	2959	7	novel_not_in_catalog	STX16	novel	4318	9	NA	NA	0	1202	intron_retention	FALSE	non_canonical	0	0	junction_1	305611.33254275034	NA	4	1	TRUE	NA	NA	NA	C	coding	224	675	888	1562	20.0	0	True	AAAAAG	-24
PB.10226.1	chr6	-	3734	24	novel_in_catalog	AHI1	novel	5921	27	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	1	9189	junction_1	37786.24305895463	NA	0	NA	TRUE	NA	NA	NA	A	coding	1053	3162	373	3534	10.0	-35	True	AATAAA	-17
PB.841.3	chr1	+	2865	11	novel_in_catalog	IFI16	novel	856	3	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	24154	junction_1	398019.31425628084	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	597	2618	35.0	3	True	AATAAA	-21
PB.8637.5	chr3	+	3868	10	novel_not_in_catalog	FYTTD1	novel	718	7	NA	NA	5	2	any annotated donor/acceptor	FALSE	canonical	1	11	junction_9	189018.8264785636	NA	3	1	TRUE	NA	NA	NA	C	coding	318	957	90	1046	35.0	-3	True	AATAAA	-19
PB.1153.11	chr1	+	2278	3	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-9	1660	any annotated donor/acceptor	FALSE	canonical	1	111	junction_1	296.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-13	True	ATTAAA	-17
PB.1771.3	chr11	+	1802	8	novel_in_catalog	PGAP2	novel	1815	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1227	junction_2	123410.73940930351	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	AATAAA	-16
PB.1771.2	chr11	+	1792	7	full-splice_match	PGAP2	ENST00000396986.6	1837	7	81	-36	2	0	multi-exon	FALSE	canonical	1	31362	junction_2	107488.26451292253	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	116	880	10.0	-16	True	AATAAA	-36
PB.1771.1	chr11	+	2549	5	novel_in_catalog	PGAP2	novel	1815	8	NA	NA	2	-2	intron_retention	FALSE	canonical	1	31362	junction_2	114750.13035068849	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	116	748	20.0	-16	True	AATAAA	-16
PB.841.2	chr1	+	3204	13	novel_in_catalog	IFI16	novel	856	3	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	24154	junction_1	351128.4059577204	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	600	2957	35.0	0	True	AATAAA	-21
PB.1771.5	chr11	+	2394	5	novel_in_catalog	PGAP2	novel	1815	8	NA	NA	2	9	intron_retention	FALSE	canonical	1	52396	junction_1	110989.68967740878	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	102	728	20.0	1	True	AATAAA	-9
PB.1771.4	chr11	+	1777	6	full-splice_match	PGAP2	ENST00000463452.6	931	6	-37	-809	1	-2	multi-exon	FALSE	canonical	1	52396	junction_1	99291.37587927765	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	121	885	20.0	-18	True	AATAAA	-16
PB.1090.9	chr1	+	2899	1	genic	CD46	novel	NA	NA	NA	NA	-2	-4771	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-57	True	NA	NA
PB.1090.8	chr1	+	3910	12	novel_in_catalog	CD46	novel	3371	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	520171	junction_11	404258.8670055303	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	159	1133	20.0	-57	True	AATAAA	-23
PB.8637.4	chr3	+	3112	9	novel_not_in_catalog	FYTTD1	novel	718	7	NA	NA	9	1651	any annotated donor/acceptor	FALSE	canonical	1	10594	junction_7	191958.6560243833	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	86	874	35.0	1	True	TATAAA	-21
PB.3785.1	chr15	-	2086	11	novel_not_in_catalog	DNAJC17	novel	3731	11	NA	NA	-1	803	any annotated donor/acceptor	TRUE	canonical	1	2299	junction_9	93674.03916032446	NA	3	NA	TRUE	NA	NA	NA	A	coding	135	408	426	833	95.0	-7	True	NA	NA
PB.5298.1	chr17	-	3713	5	full-splice_match	CBX8	ENST00000269385.8	3791	5	71	7	71	-7	multi-exon	FALSE	canonical	1	133837	junction_1	9737.690649609896	NA	2	NA	TRUE	NA	NA	NA	A	coding	389	1170	48	1217	35.0	-1	True	AATATA	-9
PB.1090.2	chr1	+	3259	14	full-splice_match	CD46	ENST00000358170.6	3371	14	110	2	44	-2	multi-exon	FALSE	canonical	1	46512	junction_6	557813.0696683615	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	47	1225	20.0	3	True	AATAAA	-22
PB.1090.1	chr1	+	3169	11	novel_in_catalog	CD46	novel	3371	14	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	50646	junction_9	458759.6382660096	NA	2	NA	TRUE	NA	NA	NA	C	coding	358	1077	176	1252	20.0	-126	False	AATAAA	-23
PB.11365.1	chr8	-	1893	1	genic	LNCOC1	novel	NA	NA	NA	NA	-65	-22894	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	152	459	3	461	95.0	5978	False	NA	NA
PB.9689.6	chr6	+	2331	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	12	2988	-1	841	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	115	1470	45.0	-1	True	AGTAAA	-20
PB.1090.6	chr1	+	2969	11	novel_in_catalog	CD46	novel	3371	14	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	6088	junction_1	533070.9098437937	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	38	1057	25.0	-58	True	AATAAA	-14
PB.2763.1	chr12	+	4986	7	full-splice_match	RAB21	ENST00000261263.4	15546	7	279	10281	279	4085	multi-exon	FALSE	canonical	1	521760	junction_3	103455.13585769116	NA	7	NA	TRUE	NA	NA	NA	A	coding	106	321	335	655	20.0	-79	False	AATAAA	-16
PB.1090.4	chr1	+	3047	13	full-splice_match	CD46	ENST00000367042.5	3326	13	-10	289	-10	0	multi-exon	FALSE	canonical	1	520171	junction_12	387876.14363618236	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	167	1300	15.0	-65	True	AATAAA	-26
PB.8232.2	chr3	-	3183	10	full-splice_match	PDZRN3	ENST00000263666.8	4248	10	-2	1067	-2	-364	multi-exon	FALSE	canonical	1	70880	junction_9	30370.05373394109	NA	0	NA	TRUE	NA	NA	NA	C	coding	1022	3066	118	3183	60.0	-2	True	NA	NA
PB.1217.11	chr1	-	2431	6	incomplete-splice_match	B3GALNT2	ENST00000313984.3	1874	8	-33	13704	26	308	3prime_fragment	FALSE	canonical	1	4942	junction_4	80192.30015556356	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	204	1004	20.0	-4	True	NA	NA
PB.1217.12	chr1	-	1954	5	incomplete-splice_match	B3GALNT2	ENST00000366600.7	2015	12	11	29046	11	-61	3prime_fragment	FALSE	canonical	1	58338	junction_4	53891.47299202352	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	219	896	85.0	-19	True	NA	NA
PB.8232.1	chr3	-	3510	8	full-splice_match	PDZRN3	ENST00000479530.5	2778	8	-92	-640	-92	-63	multi-exon	FALSE	canonical	1	8474	junction_7	50297.64312001678	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	290	2641	20.0	-2	False	AATAAA	-18
PB.5458.1	chr18	+	6158	6	full-splice_match	SETBP1	ENST00000282030.5	9899	6	39	3702	39	-3702	multi-exon	FALSE	canonical	1	10584	junction_1	17152.31785619658	NA	1	NA	TRUE	NA	NA	NA	A	coding	1596	4791	258	5048	90.0	-43	False	NA	NA
PB.7867.10	chr22	+	3072	11	incomplete-splice_match	GTSE1	ENST00000454366.1	3112	12	204	284	204	-284	5prime_fragment	FALSE	canonical	1	127997	junction_1	55530.531353121405	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	457	2676	75.0	-323	False	NA	NA
PB.8193.2	chr3	-	1680	6	full-splice_match	ARF4	ENST00000303436.10	1660	6	-23	3	-23	-3	multi-exon	FALSE	canonical	1	833889	junction_3	486884.0929664471	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	292	834	10.0	28	False	AATAAA	-14
PB.8193.3	chr3	-	988	6	full-splice_match	ARF4	ENST00000303436.10	1660	6	-41	713	-41	-671	multi-exon	FALSE	canonical	1	833889	junction_3	486884.0929664471	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	310	852	30.0	-1	True	ATTAAA	-15
PB.8193.1	chr3	-	1735	6	full-splice_match	ARF4	ENST00000486310.5	1601	6	-94	-40	48	-2	multi-exon	TRUE	canonical	1	28903	junction_4	676684.2964335437	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-15
PB.7629.6	chr22	+	2846	5	full-splice_match	SNAP29	ENST00000215730.11	4287	5	43	1398	43	-1398	multi-exon	FALSE	canonical	1	445659	junction_1	62987.82649250568	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	86	862	25.0	-11	True	AATAAA	-34
PB.1153.13	chr1	+	2166	5	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-9	10160	any annotated donor/acceptor	FALSE	canonical	1	148	junction_2	2266.7160579790316	NA	1	NA	TRUE	NA	NA	NA	C	coding	138	417	1714	2130	30.0	-13	True	NA	NA
PB.1245.13	chr1	-	5910	33	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	9	11372	9	-613	3prime_fragment	FALSE	canonical	1	25	junction_17	22743.988367099853	NA	0	NA	TRUE	NA	NA	NA	C	coding	1840	5520	389	5908	55.0	-11	True	NA	NA
PB.10898.21	chr7	-	3831	9	full-splice_match	TCAF1	ENST00000479870.5	5733	9	22	1880	-7	441	multi-exon	FALSE	canonical	1	1915	junction_2	113190.33107309784	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	188	2953	45.0	42	True	NA	NA
PB.7110.29	chr2	+	3236	13	full-splice_match	SEPT2	ENST00000391971.6	3315	13	76	3	1	0	multi-exon	FALSE	canonical	1	634146	junction_7	777001.6272450786	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	64	1149	25.0	-9	True	AATAAA	-20
PB.7110.28	chr2	+	3437	13	novel_not_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1070611.9190053928	NA	6	1	TRUE	NA	NA	NA	C	coding	321	966	385	1350	25.0	-40	True	AATAAA	-20
PB.11671.1	chr9	+	3690	17	novel_not_in_catalog	TDRD7	novel	3834	17	NA	NA	128	-4	any annotated donor/acceptor	FALSE	canonical	1	431	junction_9	54062.79831388072	NA	0	NA	TRUE	NA	NA	NA	C	coding	1094	3285	168	3452	40.0	-18	True	AATAAA	-16
PB.1793.19	chr11	-	2504	3	full-splice_match	TPP1	ENST00000531754.2	996	3	19	-1527	0	14	multi-exon	FALSE	canonical	1	647421	junction_2	28867.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-8	True	NA	NA
PB.1793.18	chr11	-	2894	1	novel_in_catalog	TPP1	novel	3560	13	NA	NA	0	15	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.1793.17	chr11	-	1970	13	full-splice_match	TPP1	ENST00000299427.11	3560	13	56	1534	0	304	multi-exon	FALSE	canonical	1	647421	junction_12	134360.3364653289	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	3	1721	10.0	-8	True	NA	NA
PB.7110.22	chr2	+	4033	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	634146	junction_6	805640.1023999233	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	1039	1947	25.0	-45	True	AATAAA	-19
PB.7110.21	chr2	+	3753	16	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	13151	junction_4	1208518.7716758323	NA	2	NA	TRUE	NA	NA	NA	C	coding	321	966	701	1666	25.0	-52	True	AATAAA	-20
PB.1793.14	chr11	-	2419	13	full-splice_match	TPP1	ENST00000299427.11	3560	13	55	1086	-1	-545	multi-exon	FALSE	canonical	1	647421	junction_12	134360.3364653289	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	4	1722	40.0	-9	True	ACTAAA	-40
PB.1793.13	chr11	-	2613	13	full-splice_match	TPP1	ENST00000299427.11	3560	13	63	884	0	-343	multi-exon	FALSE	canonical	1	647421	junction_12	134360.3364653289	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	23	1714	30.0	-1	True	NA	NA
PB.1793.12	chr11	-	3100	13	full-splice_match	TPP1	ENST00000299427.11	3560	13	55	405	-1	-135	multi-exon	FALSE	canonical	1	647421	junction_12	134360.3364653289	NA	2	1	TRUE	NA	NA	NA	C	coding	572	1719	4	1722	30.0	-9	True	NA	NA
PB.1793.11	chr11	-	3256	13	full-splice_match	TPP1	ENST00000299427.11	3560	13	56	248	0	22	multi-exon	FALSE	canonical	1	647421	junction_12	134360.3364653289	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	3	1721	20.0	-8	True	NA	NA
PB.7110.24	chr2	+	3598	14	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	492	junction_2	1142805.108445906	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	547	1512	25.0	-43	True	AATAAA	-19
PB.1153.12	chr1	+	2262	9	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-9	15	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	22189.70611567445	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	367	666	20.0	-13	True	ATTAAA	-28
PB.1439.4	chr10	+	2372	15	full-splice_match	DDX50	ENST00000373585.7	2538	15	164	2	125	-2	multi-exon	FALSE	canonical	1	64122	junction_8	77508.35482654994	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	139	2157	30.0	127	False	AATAAA	-26
PB.1439.5	chr10	+	2048	13	incomplete-splice_match	DDX50	ENST00000373585.7	2538	15	9027	1	-3122	-1	5prime_fragment	FALSE	canonical	1	64122	junction_6	74488.01100158483	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	501	1832	30.0	8990	False	AATAAA	-27
PB.11650.8	chr9	-	4015	5	novel_in_catalog	ZNF484	novel	3960	4	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	1	8670	junction_4	22207.641335529082	NA	9	NA	TRUE	NA	NA	NA	C	coding	852	2559	251	2809	30.0	-2	True	NA	NA
PB.1439.1	chr10	+	2676	16	novel_in_catalog	DDX50	novel	2538	15	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	16937	junction_2	85043.43553021728	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	442	2460	30.0	-64	False	AATAAA	-27
PB.1439.2	chr10	+	2604	16	novel_in_catalog	DDX50	novel	2538	15	NA	NA	-12	0	intron_retention	FALSE	canonical	1	5893	junction_1	86433.98118631094	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	369	2387	25.0	-49	True	AATAAA	-28
PB.1439.3	chr10	+	2899	16	novel_not_in_catalog	DDX50	novel	2538	15	NA	NA	3	-1	intron_retention	FALSE	canonical	1	5196	junction_2	87447.20836746147	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	665	2683	30.0	-23	True	AATAAA	-27
PB.1234.30	chr1	-	2215	12	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	-31	274	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	122651.49111207954	NA	0	NA	TRUE	NA	NA	NA	B	coding	650	1950	265	2214	60.0	-9	True	NA	NA
PB.5643.14	chr19	-	1849	16	full-splice_match	RANBP3	ENST00000034275.12	1762	16	-52	-35	2	-1	multi-exon	FALSE	canonical	1	242747	junction_15	174179.02931133818	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	57	1556	15.0	1	True	NA	NA
PB.5643.11	chr19	-	2054	17	full-splice_match	RANBP3	ENST00000340578.10	3233	17	2	1177	2	0	multi-exon	FALSE	canonical	1	35628	junction_14	233807.8058351209	NA	1	NA	TRUE	NA	NA	NA	C	coding	567	1704	57	1760	15.0	1	True	NA	NA
PB.5643.10	chr19	-	2132	16	full-splice_match	RANBP3	ENST00000034275.12	1762	16	-24	-346	-2	310	multi-exon	FALSE	canonical	1	242747	junction_15	174179.02931133818	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	29	1528	10.0	-18	True	NA	NA
PB.5643.13	chr19	-	1811	16	novel_not_in_catalog	RANBP3	novel	3186	17	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	11	junction_9	212012.127406859	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	657	1517	15.0	-20	True	NA	NA
PB.5643.12	chr19	-	2001	17	full-splice_match	RANBP3	ENST00000439268.6	3186	17	8	1177	-3	0	multi-exon	FALSE	canonical	1	35628	junction_14	236604.28828184702	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	19	1707	15.0	-8	True	NA	NA
PB.177.5	chr1	+	3730	17	full-splice_match	SRRM1	ENST00000323848.13	4011	17	284	-3	3	3	multi-exon	FALSE	canonical	1	68130	junction_12	198644.4456901793	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	32	2746	20.0	-6	True	AATAAA	-20
PB.177.4	chr1	+	2773	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-62	0	intron_retention	FALSE	canonical	1	39526	junction_4	196900.78821754892	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-5724	False	NA	NA
PB.177.7	chr1	+	3720	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-4	13	intron_retention	FALSE	canonical	1	38943	junction_5	188828.86939945968	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	60	2726	30.0	-34	True	AATAAA	-30
PB.177.6	chr1	+	2531	17	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-15	-61	intron_retention	FALSE	canonical	1	29283	junction_8	221937.76041690403	NA	2	1	TRUE	NA	NA	NA	C	coding	451	1356	71	1426	80.0	-5677	False	NA	NA
PB.177.3	chr1	+	3765	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	3	1	intron_retention	FALSE	canonical	1	132978	junction_17	179543.746012229	NA	0	NA	TRUE	NA	NA	NA	C	coding	918	2757	32	2788	30.0	-6	True	AATAAA	-13
PB.177.2	chr1	+	2514	16	incomplete-splice_match	SRRM1	ENST00000323848.13	4011	17	285	1798	-2	0	3prime_fragment	FALSE	canonical	1	68130	junction_12	195390.8210741402	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2484	31	2514	75.0	-5	True	NA	NA
PB.3725.21	chr15	-	3894	30	incomplete-splice_match	CYFIP1	ENST00000617928.4	6793	31	-57	5588	-10	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1202	3609	113	3721	25.0	311	False	AGTAAA	-16
PB.3725.20	chr15	-	4026	31	full-splice_match	CYFIP1	ENST00000617928.4	6793	31	-49	2816	-2	-402	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1253	3762	105	3866	35.0	-41	True	TATAAA	-19
PB.3725.22	chr15	-	3748	30	incomplete-splice_match	CYFIP1	ENST00000617928.4	6793	31	-85	5762	-38	-177	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1202	3606	141	3746	35.0	283	False	ATTAAA	-18
PB.11559.1	chr9	+	4073	1	novel_in_catalog	FGF7P6	novel	1890	3	NA	NA	9	-53657	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.7.9	chr1	-	2859	19	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	-17	0	any annotated donor/acceptor	FALSE	canonical	1	424	junction_5	230493.51806935406	NA	0	NA	TRUE	NA	NA	NA	B	coding	778	2337	34	2370	15.0	-18	True	AATAAA	-27
PB.7.8	chr1	-	2873	20	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	242524.94427334008	NA	0	NA	TRUE	NA	NA	NA	B	coding	785	2358	27	2384	15.0	-11	True	AATAAA	-27
PB.7.7	chr1	-	3200	19	novel_in_catalog	NOC2L	novel	1611	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	45795	junction_13	235116.63601831967	NA	1	NA	TRUE	NA	NA	NA	B	coding	538	1617	1095	2711	15.0	-5	True	AATAAA	-27
PB.7.6	chr1	-	3240	19	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	14697	junction_3	240940.93132745495	NA	9	3	TRUE	NA	NA	NA	B	coding	440	1323	1094	2416	15.0	-4	True	AATAAA	-27
PB.7.5	chr1	-	3367	20	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	248907.02448585987	NA	0	NA	TRUE	NA	NA	NA	B	coding	342	1029	1110	2138	15.0	-20	True	AATAAA	-27
PB.9650.2	chr5	-	2312	6	novel_in_catalog	DOK3	novel	2292	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	20216	junction_1	70266.77089606438	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	182	1174	20.0	4	True	AATAAA	-15
PB.7.3	chr1	-	2831	20	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	0	0	any annotated donor/acceptor	TRUE	canonical	1	27852	junction_13	237111.62723726244	NA	0	NA	TRUE	NA	NA	NA	B	coding	774	2325	17	2341	15.0	-1	True	AATAAA	-28
PB.7.2	chr1	-	2777	19	novel_in_catalog	NOC2L	novel	1611	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	105990	junction_6	217392.37388827096	NA	0	NA	TRUE	NA	NA	NA	B	coding	754	2265	23	2287	15.0	-7	True	AATAAA	-28
PB.7.1	chr1	-	4609	18	novel_in_catalog	NOC2L	novel	1611	5	NA	NA	-13	0	intron_retention	FALSE	canonical	1	105990	junction_6	229498.27652774248	NA	2	NA	TRUE	NA	NA	NA	B	coding	538	1617	2503	4119	15.0	-14	True	AATAAA	-28
PB.7043.46	chr2	-	1825	10	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	190	combination_of_known_junctions	FALSE	canonical	1	4313	junction_9	796119.9103269015	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	257	1450	50.0	-3	True	AAGAAA	-18
PB.7043.47	chr2	-	1789	9	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	227	any annotated donor/acceptor	FALSE	canonical	1	210	junction_6	710129.6392052299	NA	1	NA	TRUE	NA	NA	NA	C	coding	388	1167	211	1377	50.0	-1	True	NA	NA
PB.7043.44	chr2	-	1925	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	227	any annotated donor/acceptor	FALSE	canonical	1	187	junction_3	795026.7696117742	NA	2	1	TRUE	NA	NA	NA	C	coding	418	1257	211	1467	50.0	-1	True	NA	NA
PB.7043.45	chr2	-	1872	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	190	any annotated donor/acceptor	FALSE	canonical	1	331	junction_9	797905.8959687718	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	304	1497	50.0	-1	True	AAGAAA	-18
PB.2970.11	chr12	-	4547	18	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	1	-91	intron_retention	FALSE	canonical	1	10650	junction_15	111298.32190535533	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	522	3449	55.0	-2	True	TATAAA	-10
PB.2970.10	chr12	-	4587	18	novel_not_in_catalog	KDM2B	novel	5224	23	NA	NA	0	-91	intron_retention	FALSE	canonical	1	164	junction_17	113808.90826539263	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	190	3489	55.0	-3	True	TATAAA	-10
PB.7043.40	chr2	-	2048	10	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-114	combination_of_known_junctions	FALSE	canonical	1	4313	junction_9	796119.9103269015	NA	9	1	TRUE	NA	NA	NA	C	coding	397	1194	255	1448	20.0	-1	True	AATAAA	-24
PB.2970.12	chr12	-	4408	16	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	1	-91	intron_retention	FALSE	canonical	1	483	junction_11	100231.1570273879	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	80	3310	55.0	-2	True	TATAAA	-10
PB.3423.4	chr14	-	2064	10	full-splice_match	L2HGDH	ENST00000267436.8	6414	10	319	4031	0	-814	multi-exon	FALSE	canonical	1	62435	junction_6	15949.37266617231	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	80	1471	100.0	-4	True	NA	NA
PB.2970.19	chr12	-	5146	24	novel_not_in_catalog	KDM2B	novel	5224	23	NA	NA	-1264	-92	intron_retention	FALSE	non_canonical	0	0	junction_8	111621.40738107348	NA	0	NA	TRUE	NA	NA	NA	C	coding	1318	3957	93	4049	55.0	-1	True	TATAAA	-9
PB.2970.18	chr12	-	5210	23	novel_in_catalog	KDM2B	novel	5224	23	NA	NA	-21	-91	intron_retention	FALSE	canonical	1	31757	junction_22	99737.02139056275	NA	0	NA	TRUE	NA	NA	NA	C	coding	1305	3918	195	4112	55.0	-1	True	TATAAA	-10
PB.3423.1	chr14	-	4101	11	full-splice_match	L2HGDH	ENST00000421284.7	1958	11	-13	-2130	-13	-1087	multi-exon	TRUE	canonical	1	34553	junction_1	22349.364692536565	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	93	1484	55.0	-17	False	AATAAA	-19
PB.7043.49	chr2	-	1415	9	full-splice_match	SERPINE2	ENST00000258405.8	2195	9	34	746	3	-44	multi-exon	FALSE	canonical	1	200702	junction_3	651554.5444950173	NA	1	1	TRUE	NA	NA	NA	C	coding	398	1197	210	1406	60.0	0	True	GATAAA	-20
PB.8377.14	chr3	+	3777	12	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	12	-3	intron_retention	FALSE	canonical	1	5704	junction_8	655409.9122082125	NA	3	NA	TRUE	NA	NA	NA	C	coding	327	984	116	1099	30.0	-4	True	AATAAA	-11
PB.8377.15	chr3	+	2843	6	novel_not_in_catalog	SEC61A1	novel	1871	12	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	830358.4622950259	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	120	824	15.0	-1	True	AATAAA	-18
PB.8377.16	chr3	+	3362	11	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	18	0	intron_retention	FALSE	canonical	1	4829	junction_8	661044.2152211908	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	110	1342	20.0	2	True	AATAAA	-19
PB.8377.10	chr3	+	4434	12	novel_not_in_catalog	SEC61A1	novel	1871	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	1174	junction_8	656349.8168450361	NA	2	NA	TRUE	NA	NA	NA	C	coding	221	666	1750	2415	15.0	-26	True	AATAAA	-18
PB.8377.11	chr3	+	5486	11	novel_in_catalog	SEC61A1	novel	1871	12	NA	NA	8	0	intron_retention	FALSE	canonical	1	954050	junction_2	476137.42626902374	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	120	1103	20.0	-8	True	AATAAA	-19
PB.8377.12	chr3	+	3823	14	novel_not_in_catalog	SEC61A1	novel	1871	12	NA	NA	11	-1	any annotated donor/acceptor	FALSE	canonical	1	151	junction_9	804940.8251479765	NA	22	1	TRUE	NA	NA	NA	C	coding	170	513	1292	1804	15.0	-5	True	AATAAA	-18
PB.8377.13	chr3	+	2686	12	full-splice_match	SEC61A1	ENST00000243253.7	3635	12	68	881	11	-876	multi-exon	FALSE	canonical	1	954050	junction_2	459747.38898266753	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	117	1547	20.0	-5	True	NA	NA
PB.4535.14	chr16	-	2937	4	incomplete-splice_match	ZNF19	ENST00000565637.5	2612	5	4697	-773	-3	-23	5prime_fragment	FALSE	canonical	1	3719	junction_3	14232.94490492627	NA	0	NA	TRUE	NA	NA	NA	B	coding	446	1341	33	1373	70.0	0	True	NA	NA
PB.4535.15	chr16	-	1853	5	incomplete-splice_match	ZNF19	ENST00000568815.5	573	6	2496	-1445	0	0	5prime_fragment	FALSE	canonical	1	7766	junction_4	11456.374906574942	NA	0	NA	TRUE	NA	NA	NA	B	coding	458	1377	56	1432	20.0	3	True	NA	NA
PB.4535.16	chr16	-	4797	1	novel_in_catalog	AC010547.4	novel	3677	12	NA	NA	8	-32199	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	17	54	419	472	80.0	7	True	NA	NA
PB.4535.11	chr16	-	3147	5	novel_not_in_catalog	ZNF23	novel	3020	2	NA	NA	-7	8	intron_retention	FALSE	non_canonical	0	0	junction_4	28164.042123779036	NA	2	1	TRUE	NA	NA	NA	C	coding	686	2061	605	2665	60.0	1	True	AATAAA	-9
PB.4535.12	chr16	-	2634	5	novel_not_in_catalog	ZNF23	novel	3020	2	NA	NA	-3	8	any annotated donor/acceptor	FALSE	canonical	1	709	junction_3	27035.769260370602	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	218	2152	60.0	-27	True	AATAAA	-9
PB.4535.13	chr16	-	2376	3	full-splice_match	ZNF23	ENST00000539742.5	2358	3	7	-25	0	8	multi-exon	FALSE	canonical	1	3204	junction_1	10266.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	137	1894	60.0	-23	True	AATAAA	-9
PB.1153.17	chr1	+	3054	6	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	1	1660	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	1976.0531774221058	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	ATTAAA	-17
PB.7153.2	chr20	+	1834	3	full-splice_match	AP5S1	ENST00000615891.1	5362	3	-9	3537	0	-2	multi-exon	FALSE	canonical	1	126448	junction_1	7725.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	229	831	10.0	-9	True	NA	NA
PB.7153.1	chr20	+	1485	3	full-splice_match	AP5S1	ENST00000615891.1	5362	3	-29	3906	3	-371	multi-exon	FALSE	canonical	1	126448	junction_1	7725.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	249	851	80.0	-29	True	NA	NA
PB.494.1	chr1	+	5715	20	novel_not_in_catalog	ADGRL2	novel	5023	25	NA	NA	546	0	any annotated donor/acceptor	FALSE	canonical	1	16515	junction_1	63214.57834928676	NA	0	NA	TRUE	NA	NA	NA	B	coding	1403	4212	227	4438	35.0	-12	True	AATAAA	-18
PB.494.3	chr1	+	5786	21	novel_not_in_catalog	ADGRL2	novel	5023	25	NA	NA	561	3	any annotated donor/acceptor	FALSE	canonical	1	16515	junction_1	78578.57046797175	NA	4	NA	TRUE	NA	NA	NA	B	coding	1163	3492	212	3703	35.0	3	True	AATAAA	-22
PB.494.2	chr1	+	5772	21	novel_not_in_catalog	ADGRL2	novel	5023	25	NA	NA	553	-3	any annotated donor/acceptor	FALSE	canonical	1	16515	junction_1	76478.78053452146	NA	13	NA	TRUE	NA	NA	NA	B	coding	1173	3522	220	3741	35.0	-5	True	AATAAA	-29
PB.7672.3	chr22	-	3583	7	full-splice_match	TPST2	ENST00000338754.8	5697	7	17	2097	17	1666	multi-exon	FALSE	canonical	1	228648	junction_5	98666.28289452392	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	255	1388	15.0	-44	False	GATAAA	-17
PB.7672.2	chr22	-	3650	7	full-splice_match	TPST2	ENST00000338754.8	5697	7	58	1989	20	1774	multi-exon	FALSE	canonical	1	228648	junction_5	98666.28289452392	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	214	1347	20.0	-3	True	NA	NA
PB.7672.1	chr22	-	4028	7	full-splice_match	TPST2	ENST00000338754.8	5697	7	49	1620	11	-1620	multi-exon	FALSE	canonical	1	228648	junction_5	98666.28289452392	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	223	1356	80.0	-12	True	NA	NA
PB.10531.1	chr7	-	2743	3	novel_in_catalog	SNHG15	novel	3116	2	NA	NA	-19	1	intron_retention	FALSE	canonical	1	683199	junction_2	41641.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2	True	AATAAA	-18
PB.10531.2	chr7	-	1275	4	novel_in_catalog	SNHG15	novel	3116	2	NA	NA	6	0	intron_retention	FALSE	canonical	1	540507	junction_2	65278.0468321642	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	21	True	AATAAA	-17
PB.7672.4	chr22	-	1872	7	full-splice_match	TPST2	ENST00000338754.8	5697	7	58	3767	20	-4	multi-exon	FALSE	canonical	1	228648	junction_5	98666.28289452392	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	214	1347	25.0	-3	True	AATAAA	-39
PB.6377.5	chr2	+	1947	15	full-splice_match	SNX17	ENST00000233575.6	2044	15	95	2	0	-1	multi-exon	FALSE	canonical	1	804876	junction_1	281542.6302421959	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	128	1540	10.0	-3	True	ATTAAA	-19
PB.6973.7	chr2	+	2218	8	full-splice_match	CREB1	ENST00000353267.7	7588	8	11	5359	0	283	multi-exon	FALSE	canonical	1	213854	junction_3	88544.67972217214	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	227	1204	30.0	0	True	AATAAA	-13
PB.8668.6	chr4	+	3874	15	novel_in_catalog	ADD1	novel	3059	7	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	768193	junction_1	256734.49486517892	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	112	2325	30.0	-11	True	AATAAA	-24
PB.6511.5	chr2	-	2124	6	full-splice_match	RAB1A	ENST00000409784.7	2447	6	7	316	2	-316	multi-exon	FALSE	canonical	1	674809	junction_4	307029.88118318387	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	185	802	25.0	0	True	AATAAA	-16
PB.8668.3	chr4	+	4072	16	novel_in_catalog	ADD1	novel	3059	7	NA	NA	-13	-3	intron_retention	FALSE	canonical	1	64345	junction_13	496812.3285753149	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	137	2536	25.0	8	True	AATAAA	-11
PB.6018.1	chr19	+	1746	9	full-splice_match	BCKDHA	ENST00000269980.6	2103	9	353	4	5	0	multi-exon	TRUE	canonical	1	259347	junction_1	154233.07548966273	NA	0	NA	TRUE	NA	NA	NA	A	coding	445	1338	16	1353	10.0	-5	True	AATAAA	-25
PB.1153.19	chr1	+	3093	6	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	2	1660	any annotated donor/acceptor	FALSE	canonical	1	67	junction_4	1962.3278421303612	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	ATTAAA	-17
PB.11532.1	chr9	+	2144	11	full-splice_match	TMEM8B	ENST00000439587.6	2150	11	5	1	1	0	multi-exon	FALSE	canonical	1	4374	junction_1	51080.36171994086	NA	0	NA	TRUE	NA	NA	NA	A	coding	338	1017	1087	2103	15.0	-36	True	NA	NA
PB.8668.2	chr4	+	3944	15	full-splice_match	ADD1	ENST00000264758.11	4045	15	101	0	5	0	multi-exon	FALSE	canonical	1	161902	junction_10	368129.7833788391	NA	9	2	TRUE	NA	NA	NA	C	coding	768	2307	88	2394	35.0	13	True	AATAAA	-25
PB.7726.11	chr22	+	1843	9	full-splice_match	FBXO7	ENST00000397426.5	1888	9	43	2	43	-2	multi-exon	FALSE	canonical	1	343497	junction_1	434308.755309209	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	320	1546	15.0	-4	True	ATTAAA	-14
PB.7726.10	chr22	+	1564	8	novel_in_catalog	FBXO7	novel	2195	9	NA	NA	27	-2	no_combination_of_known_junctions	FALSE	canonical	1	28133	junction_1	553766.4796626824	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	167	1267	15.0	-20	True	ATTAAA	-14
PB.7726.13	chr22	+	2560	1	novel_in_catalog	FBXO7	novel	2195	9	NA	NA	8980	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	110	333	1931	2263	15.0	-1923	False	ATTAAA	-14
PB.10021.1	chr6	-	2449	4	novel_not_in_catalog	ENPP5	novel	3834	5	NA	NA	-29	12	any annotated donor/acceptor	FALSE	canonical	1	5618	junction_3	65890.09473863781	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	93	1526	35.0	9	True	ATTAAA	-32
PB.8668.1	chr4	+	3951	16	novel_in_catalog	ADD1	novel	3059	7	NA	NA	20	0	intron_retention	TRUE	canonical	1	166311	junction_14	427703.7064931542	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	154	2049	35.0	-9	True	AATAAA	-25
PB.2853.5	chr12	+	3681	1	novel_in_catalog	CHST11	novel	936	2	NA	NA	10	3667	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	57	174	430	603	95.0	1	True	NA	NA
PB.2853.4	chr12	+	3970	3	full-splice_match	CHST11	ENST00000549260.5	5696	3	-31	1757	-28	-1757	multi-exon	FALSE	canonical	1	112355	junction_1	103827.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	473	1516	80.0	-8	True	GATAAA	-27
PB.2853.7	chr12	+	3919	3	full-splice_match	CHST11	ENST00000303694.5	5709	3	29	1761	1	-1761	multi-exon	FALSE	canonical	1	109405	junction_1	105302.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	352	1059	411	1469	75.0	2	True	GATAAA	-23
PB.2853.6	chr12	+	1765	3	full-splice_match	CHST11	ENST00000549260.5	5696	3	29	3902	-1	773	multi-exon	FALSE	canonical	1	112355	junction_1	103827.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	413	1456	25.0	0	True	CATAAA	-30
PB.2853.1	chr12	+	5750	3	full-splice_match	CHST11	ENST00000549260.5	5696	3	-66	12	-63	-12	multi-exon	FALSE	canonical	1	112355	junction_1	103827.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	347	1044	508	1551	50.0	-13	True	ATTAAA	-4
PB.2853.3	chr12	+	1861	3	full-splice_match	CHST11	ENST00000303694.5	5709	3	-54	3902	-49	773	multi-exon	FALSE	canonical	1	109405	junction_1	105302.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	494	1552	25.0	1	True	CATAAA	-30
PB.2853.2	chr12	+	5756	3	full-splice_match	CHST11	ENST00000303694.5	5709	3	-59	12	-54	-12	multi-exon	FALSE	canonical	1	109405	junction_1	105302.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	352	1059	499	1557	50.0	-4	True	ATTAAA	-4
PB.5365.4	chr18	+	6659	48	novel_not_in_catalog	SMCHD1	novel	8821	48	NA	NA	-12	7	any annotated donor/acceptor	TRUE	canonical	1	77	junction_12	160931.53186403535	NA	0	NA	TRUE	NA	NA	NA	C	coding	1974	5925	351	6275	30.0	0	True	TATAAA	-30
PB.5365.5	chr18	+	3659	27	incomplete-splice_match	SMCHD1	ENST00000320876.10	8821	48	139	65551	139	1	3prime_fragment	FALSE	canonical	1	215152	junction_1	132171.2373656361	NA	1	NA	TRUE	NA	NA	NA	C	coding	1153	3459	200	3658	65.0	-10	True	TTTAAA	-6
PB.5365.6	chr18	+	4520	34	incomplete-splice_match	SMCHD1	ENST00000320876.10	8821	48	120	52509	120	-621	3prime_fragment	FALSE	canonical	1	215152	junction_1	130429.8608215339	NA	0	NA	TRUE	NA	NA	NA	C	coding	1434	4302	219	4520	70.0	-29	True	NA	NA
PB.5365.7	chr18	+	5091	39	incomplete-splice_match	SMCHD1	ENST00000320876.10	8821	48	127	34995	127	215	3prime_fragment	FALSE	canonical	1	215152	junction_1	138118.68536943418	NA	0	NA	TRUE	NA	NA	NA	C	coding	1626	4878	212	5089	60.0	-22	True	NA	NA
PB.1423.1	chr10	-	4431	11	full-splice_match	RHOBTB1	ENST00000337910.9	4473	11	37	5	37	-5	multi-exon	FALSE	canonical	1	35732	junction_10	28748.490829259194	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	314	2392	25.0	515	False	AATAAA	-13
PB.5365.1	chr18	+	2101	13	incomplete-splice_match	SMCHD1	ENST00000320876.10	8821	48	-52	101262	-52	1463	3prime_fragment	FALSE	canonical	1	215152	junction_1	152944.4483339866	NA	4	NA	TRUE	NA	NA	NA	C	coding	570	1710	391	2100	65.0	4	True	NA	NA
PB.1423.3	chr10	-	2639	11	full-splice_match	RHOBTB1	ENST00000337910.9	4473	11	67	1767	67	-27	multi-exon	FALSE	canonical	1	35732	junction_10	28748.490829259194	NA	3	NA	TRUE	NA	NA	NA	C	coding	692	2079	284	2362	20.0	-1	True	AATAAA	-13
PB.1423.2	chr10	-	4305	12	novel_in_catalog	RHOBTB1	novel	4473	11	NA	NA	45	-5	combination_of_known_junctions	FALSE	canonical	1	18610	junction_1	36106.467537222874	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	306	2384	25.0	-23	True	AATAAA	-13
PB.7143.4	chr20	+	3284	22	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	78230	junction_2	213663.51384047206	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	335	2749	20.0	-39	True	AATAAA	-16
PB.7143.5	chr20	+	3340	23	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	243792.34071298488	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	408	2633	20.0	-36	True	AATAAA	-15
PB.7143.6	chr20	+	2972	22	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	-7	-309	no_combination_of_known_junctions	FALSE	canonical	1	78230	junction_2	213663.51384047206	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	332	2746	25.0	-36	True	ATTAAA	-21
PB.7143.7	chr20	+	2959	23	full-splice_match	PTPRA	ENST00000216877.10	3725	23	-5	771	-5	-363	multi-exon	FALSE	canonical	1	151770	junction_1	199377.18629082898	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	406	2787	15.0	-34	True	NA	NA
PB.5365.8	chr18	+	2516	18	incomplete-splice_match	SMCHD1	ENST00000320876.10	8821	48	150	86792	150	-4325	3prime_fragment	FALSE	canonical	1	215152	junction_1	140028.82182630218	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	189	2516	40.0	1	True	NA	NA
PB.7143.1	chr20	+	2908	21	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	-22	-309	combination_of_known_junctions	FALSE	canonical	1	3922	junction_1	194841.44805700352	NA	2	1	TRUE	NA	NA	NA	C	coding	793	2382	301	2682	25.0	-51	True	ATTAAA	-21
PB.7143.2	chr20	+	2997	23	full-splice_match	PTPRA	ENST00000216877.10	3725	23	33	695	4	-287	multi-exon	FALSE	canonical	1	151770	junction_1	199377.18629082898	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	368	2749	20.0	4	True	ATTAAA	-43
PB.7143.3	chr20	+	3497	25	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	26	junction_2	280017.4880894315	NA	8	NA	TRUE	NA	NA	NA	C	coding	793	2382	581	2962	20.0	-40	True	AATAAA	-16
PB.10525.3	chr7	+	2798	21	incomplete-splice_match	OGDH	ENST00000222673.5	4181	23	-70	1788	-3	-860	3prime_fragment	FALSE	canonical	1	426499	junction_1	165703.67643552	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2685	113	2797	40.0	0	True	NA	NA
PB.10525.2	chr7	+	4250	23	full-splice_match	OGDH	ENST00000222673.5	4181	23	-69	0	-2	0	multi-exon	FALSE	canonical	1	426499	junction_1	190230.7123341308	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	112	3183	5.0	1	True	CATAAA	-17
PB.10525.1	chr7	+	4301	24	novel_not_in_catalog	OGDH	novel	2962	20	NA	NA	-14	0	intron_retention	FALSE	canonical	1	14077	junction_1	284934.60869871057	NA	7	1	TRUE	NA	NA	NA	C	coding	1023	3072	235	3306	85.0	-525	False	NA	NA
PB.962.2	chr1	+	2246	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	-60	4649	28	-4646	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	222	1856	30.0	0	True	AAGAAA	-3
PB.10525.6	chr7	+	3344	24	novel_not_in_catalog	OGDH	novel	2962	20	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	250103.78993024217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	96	3167	5.0	-4	True	CATAAA	-16
PB.10525.5	chr7	+	1710	9	full-splice_match	OGDH	ENST00000443864.6	1744	9	-4	38	-4	-38	multi-exon	FALSE	canonical	1	426499	junction_1	179478.97808169623	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	98	1381	80.0	-6	True	NA	NA
PB.10525.4	chr7	+	4148	23	full-splice_match	OGDH	ENST00000449767.5	3479	23	-3	-666	0	0	multi-exon	FALSE	canonical	1	92018	junction_4	275021.19556908327	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	94	3153	85.0	-2	True	NA	NA
PB.1324.1	chr10	+	2272	14	full-splice_match	PLXDC2	ENST00000377252.4	12468	14	533	9663	533	-164	multi-exon	FALSE	canonical	1	156246	junction_1	24464.104972036894	NA	3	NA	TRUE	NA	NA	NA	A	coding	529	1590	309	1898	15.0	-171	False	AATAAA	-25
PB.6653.7	chr2	+	1510	7	incomplete-splice_match	EIF5B	ENST00000617677.1	4698	25	18	31717	18	-22142	3prime_fragment	FALSE	canonical	1	733278	junction_5	116969.51889701864	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1344	167	1510	70.0	0	True	NA	NA
PB.10525.9	chr7	+	2242	9	incomplete-splice_match	OGDH	ENST00000222673.5	4181	23	90273	-1	30117	1	5prime_fragment	FALSE	canonical	1	745574	junction_2	153978.95832583547	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	35	1174	5.0	2680	False	CATAAA	-18
PB.6653.6	chr2	+	5743	24	full-splice_match	EIF5B	ENST00000289371.10	5777	24	31	3	13	-3	multi-exon	FALSE	canonical	1	606372	junction_12	147519.167913458	NA	1	NA	TRUE	NA	NA	NA	C	coding	1220	3663	172	3834	30.0	-5	True	AATAAA	-18
PB.9163.1	chr5	+	3788	10	novel_in_catalog	C5orf22	novel	3612	9	NA	NA	-10	-11	combination_of_known_junctions	TRUE	canonical	1	307	junction_8	81656.2225920352	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	117	1643	45.0	-5887	False	ATTAAA	-24
PB.5895.2	chr19	+	2570	7	full-splice_match	POP4	ENST00000585603.5	3385	7	2264	-1449	-2	12	multi-exon	TRUE	canonical	1	339913	junction_1	89945.26054665445	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	39	701	25.0	-2	True	AATACA	-31
PB.6653.4	chr2	+	2516	15	incomplete-splice_match	EIF5B	ENST00000289371.10	5777	24	23	11543	5	-907	3prime_fragment	FALSE	canonical	1	606372	junction_12	164722.51805435822	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2337	180	2516	70.0	-13	True	AAAAAG	-40
PB.11650.1	chr9	-	5828	5	novel_not_in_catalog	ZNF484	novel	3960	4	NA	NA	-2	1870	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	25308.532576731905	NA	7	1	TRUE	NA	NA	NA	C	coding	816	2451	311	2761	100.0	-3	True	NA	NA
PB.3244.14	chr13	+	3793	29	full-splice_match	TPP2	ENST00000376065.8	3931	29	-1	139	-1	-41	multi-exon	FALSE	canonical	1	196105	junction_1	89829.27648818944	NA	1	NA	TRUE	NA	NA	NA	C	coding	1249	3750	38	3787	50.0	-3	True	NA	NA
PB.3244.12	chr13	+	4656	29	full-splice_match	TPP2	ENST00000376065.8	3931	29	-15	-710	-15	710	multi-exon	FALSE	canonical	1	196105	junction_1	89829.27648818944	NA	1	NA	TRUE	NA	NA	NA	C	coding	1249	3750	52	3801	25.0	-17	True	AATAAA	-21
PB.3244.13	chr13	+	4364	23	novel_in_catalog	TPP2	novel	3931	29	NA	NA	-12	10	intron_retention	FALSE	canonical	1	196105	junction_1	84491.61681091394	NA	1	NA	TRUE	NA	NA	NA	C	coding	803	2412	49	2460	65.0	-14	True	NA	NA
PB.3244.10	chr13	+	2375	13	incomplete-splice_match	TPP2	ENST00000376065.8	3931	29	-22	41430	-22	5503	3prime_fragment	FALSE	canonical	1	196105	junction_1	59910.78090215112	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	59	1744	70.0	-24	True	TTTAAA	-4
PB.3244.11	chr13	+	4786	30	novel_in_catalog	TPP2	novel	3931	29	NA	NA	-19	710	no_combination_of_known_junctions	FALSE	canonical	1	19821	junction_26	127589.9142475532	NA	1	NA	TRUE	NA	NA	NA	C	coding	1291	3876	56	3931	25.0	-21	True	AATAAA	-21
PB.2436.6	chr12	+	2633	11	novel_in_catalog	ENO2	novel	547	6	NA	NA	-9	0	intron_retention	FALSE	canonical	1	436296	junction_1	337146.1661621114	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	712	1737	20.0	-9921	False	ATTAAA	-15
PB.2436.7	chr12	+	3785	10	novel_in_catalog	ENO2	novel	547	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	840800	junction_1	239135.54324273922	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	1864	2889	20.0	2	True	ATTAAA	-15
PB.2436.4	chr12	+	2716	12	novel_in_catalog	ENO2	novel	547	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	9307	junction_1	425629.5730949528	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	514	1818	15.0	9	True	ATTAAA	-17
PB.2436.5	chr12	+	3088	9	novel_in_catalog	ENO2	novel	547	6	NA	NA	7	0	intron_retention	FALSE	canonical	1	436296	junction_1	364803.2705815561	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	715	1506	20.0	10	True	ATTAAA	-15
PB.2436.2	chr12	+	2255	11	novel_in_catalog	ENO2	novel	547	6	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	1	10199	junction_9	482467.60174201336	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	164	1288	20.0	0	True	ATTAAA	-15
PB.2436.3	chr12	+	2138	11	novel_in_catalog	ENO2	novel	547	6	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	12614	junction_7	484569.8715474993	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	137	1243	20.0	1	True	ATTAAA	-14
PB.925.2	chr1	-	1495	2	full-splice_match	METTL18	ENST00000454472.1	850	2	-37	-608	-34	-5	multi-exon	FALSE	canonical	1	18235	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	372	1119	334	1452	35.0	-94	False	AATAAA	-11
PB.2436.1	chr12	+	3525	11	full-splice_match	ENO2	ENST00000535366.5	2827	11	-698	0	-29	0	multi-exon	FALSE	canonical	1	840800	junction_1	229506.15176480563	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	1325	2629	20.0	0	True	ATTAAA	-15
PB.864.9	chr1	-	2032	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-9	-984	intron_retention	FALSE	non_canonical	0	0	junction_1	349306.44601673115	NA	0	NA	TRUE	NA	NA	NA	B	coding	273	822	80	901	30.0	-10	True	AATAAA	-18
PB.864.4	chr1	-	2140	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	1	-982	intron_retention	FALSE	non_canonical	0	0	junction_1	349738.2750222737	NA	2	1	TRUE	NA	NA	NA	B	coding	276	831	102	932	25.0	0	True	AATAAA	-20
PB.5246.1	chr17	-	3303	7	novel_in_catalog	SLC25A19	novel	1486	7	NA	NA	-6	0	intron_retention	FALSE	canonical	1	36784	junction_6	91597.76752267977	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	1871	2833	20.0	1	True	ATTAAA	-24
PB.5246.2	chr17	-	1619	8	full-splice_match	SLC25A19	ENST00000580994.5	1554	8	-16	-49	-5	0	multi-exon	FALSE	canonical	1	66795	junction_7	92277.92252865298	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	187	1149	20.0	-30	True	ATTAAA	-24
PB.5246.3	chr17	-	4077	6	full-splice_match	SLC25A19	ENST00000402418.7	2331	6	-1735	-11	2	-1	multi-exon	FALSE	canonical	1	233223	junction_3	36212.99829287821	NA	2	NA	TRUE	NA	NA	NA	C	coding	320	963	2646	3608	15.0	-12	True	ATTAAA	-23
PB.5246.4	chr17	-	1519	7	full-splice_match	SLC25A19	ENST00000442286.6	1496	7	-13	-10	3	-2	multi-exon	FALSE	canonical	1	28649	junction_6	94431.51482247157	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	89	1051	15.0	-6	True	ATTAAA	-22
PB.7545.3	chr21	+	2439	15	novel_not_in_catalog	RRP1B	novel	5090	16	NA	NA	8	-2631	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	104577.90464131688	NA	3	1	TRUE	NA	NA	NA	B	coding	332	999	110	1108	20.0	-8	True	TATAAA	-11
PB.864.2	chr1	-	3030	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	19	-42	intron_retention	FALSE	non_canonical	0	0	junction_1	349738.2750222737	NA	2	1	TRUE	NA	NA	NA	B	coding	276	831	52	882	60.0	-1	True	AATAAA	-12
PB.7545.1	chr21	+	1887	12	novel_not_in_catalog	RRP1B	novel	5090	16	NA	NA	-1	-7924	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	113476.20514517024	NA	3	1	TRUE	NA	NA	NA	B	coding	332	999	119	1117	65.0	-17	True	AAAACA	-10
PB.8363.5	chr3	-	2486	14	novel_not_in_catalog	SNX4	novel	2513	14	NA	NA	-6	-7	any annotated donor/acceptor	FALSE	canonical	1	4221	junction_13	190049.28871829898	NA	1	1	TRUE	NA	NA	NA	C	coding	337	1014	345	1358	20.0	-2	True	AATAAA	-20
PB.8363.4	chr3	-	2607	15	novel_not_in_catalog	SNX4	novel	2513	14	NA	NA	-5	-7	any annotated donor/acceptor	FALSE	canonical	1	10804	junction_7	161920.11566492866	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	31	1479	20.0	-1	True	AATAAA	-20
PB.8363.7	chr3	-	2389	13	full-splice_match	SNX4	ENST00000471751.5	1308	13	-21	-1060	-5	-7	multi-exon	FALSE	canonical	1	4221	junction_12	139422.70713759787	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	344	1261	20.0	-1	True	AATAAA	-20
PB.8363.6	chr3	-	2454	13	novel_in_catalog	SNX4	novel	2513	14	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	1	5845	junction_8	140588.33154007563	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	787	1326	20.0	0	True	AATAAA	-20
PB.8363.1	chr3	-	2728	16	novel_not_in_catalog	SNX4	novel	2513	14	NA	NA	-5	-1	any annotated donor/acceptor	TRUE	canonical	1	1717	junction_2	196167.79033907567	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	31	1572	30.0	-1	True	AATAAA	-26
PB.8363.3	chr3	-	2427	14	novel_not_in_catalog	SNX4	novel	2513	14	NA	NA	-9	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	118115.58302610891	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	35	1297	25.0	-5	True	AATAAA	-22
PB.8363.2	chr3	-	2632	15	novel_not_in_catalog	SNX4	novel	2513	14	NA	NA	-7	-3	any annotated donor/acceptor	FALSE	canonical	1	1717	junction_2	163100.43127830277	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	33	1478	25.0	-3	True	AATAAA	-24
PB.530.1	chr1	+	3133	3	novel_not_in_catalog	AC093423.3	novel	654	4	NA	NA	188537	2753	any annotated donor/acceptor	FALSE	canonical	1	16152	junction_1	88741.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	858	2577	199	2775	15.0	-349	False	ATTAAA	-22
PB.11032.20	chr8	-	1821	9	full-splice_match	TNFRSF10B	ENST00000276431.8	4146	9	157	2168	0	10	multi-exon	FALSE	canonical	1	451236	junction_7	103682.81990515292	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	129	1451	35.0	8	True	NA	NA
PB.8363.8	chr3	-	2501	14	full-splice_match	SNX4	ENST00000251775.8	2513	14	3	9	-3	-9	multi-exon	FALSE	canonical	1	313769	junction_13	82493.48614578733	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	23	1375	20.0	7	True	AATAAA	-18
PB.11032.22	chr8	-	2116	8	novel_in_catalog	TNFRSF10B	novel	3328	4	NA	NA	-4	31	intron_retention	FALSE	canonical	1	451236	junction_6	106270.66502750303	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	1430	1888	10.0	4	True	NA	NA
PB.1597.5	chr10	-	1889	15	novel_in_catalog	CWF19L1	novel	2402	13	NA	NA	3	-99	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	78928.45877613162	NA	1	1	TRUE	NA	NA	NA	C	coding	538	1617	72	1688	15.0	15	True	NA	NA
PB.1597.4	chr10	-	2530	14	full-splice_match	CWF19L1	ENST00000354105.9	1815	14	-6	-709	1	-95	multi-exon	FALSE	canonical	1	106618	junction_13	55551.24931173623	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	87	1703	15.0	0	True	NA	NA
PB.8580.1	chr3	-	4195	9	full-splice_match	TRA2B	ENST00000453386.6	2952	9	109	-1352	2	1352	multi-exon	TRUE	canonical	1	1160323	junction_8	622999.843642223	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	168	1034	15.0	-14	True	AATATA	-33
PB.1597.1	chr10	-	2635	14	full-splice_match	CWF19L1	ENST00000354105.9	1815	14	-6	-814	1	3	multi-exon	FALSE	canonical	1	106618	junction_13	55551.24931173623	NA	3	NA	TRUE	NA	NA	NA	C	coding	538	1617	87	1703	15.0	0	True	AATGAA	-26
PB.9540.4	chr5	-	5151	9	full-splice_match	NR3C1	ENST00000394464.6	6795	9	17	1627	6	9	multi-exon	FALSE	canonical	1	185341	junction_8	83664.47375790695	NA	2	NA	TRUE	NA	NA	NA	C	coding	777	2334	487	2820	45.0	2	True	AATAAA	-31
PB.1597.3	chr10	-	2010	15	novel_in_catalog	CWF19L1	novel	2402	13	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	1	10	junction_1	78928.45877613162	NA	2	1	TRUE	NA	NA	NA	C	coding	538	1617	87	1703	20.0	0	True	AATGAA	-23
PB.3088.1	chr13	-	3725	2	full-splice_match	LINC01058	ENST00000420694.1	448	2	-11	-3266	-11	3266	multi-exon	FALSE	canonical	1	1778	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	113	342	2265	2606	40.0	-3	True	NA	NA
PB.9540.9	chr5	-	3344	9	novel_in_catalog	NR3C1	novel	6795	9	NA	NA	738	0	intron_retention	FALSE	canonical	1	642	junction_8	137092.31186269847	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	260	2593	90.0	844	False	NA	NA
PB.9540.8	chr5	-	3376	9	full-splice_match	NR3C1	ENST00000343796.6	7286	9	703	3207	-35	0	multi-exon	FALSE	canonical	1	5865	junction_8	135492.5893958319	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	292	2625	90.0	-1	True	NA	NA
PB.11762.17	chr9	+	2801	21	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	27	0	any annotated donor/acceptor	FALSE	canonical	1	50	junction_3	1253614.5023840824	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	367	2562	10.0	31	True	AATAAA	-17
PB.10672.1	chr7	-	2326	11	full-splice_match	FAM133B	ENST00000445716.5	2026	11	4	-304	0	-6	multi-exon	FALSE	canonical	1	225	junction_6	13967.196622443604	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	100	843	35.0	-1	True	AATAAA	-14
PB.10672.2	chr7	-	2028	11	full-splice_match	FAM133B	ENST00000445716.5	2026	11	0	-2	0	2	multi-exon	FALSE	canonical	1	225	junction_6	13967.196622443604	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	104	847	20.0	-5	True	AGTAAA	-18
PB.10672.3	chr7	-	1911	11	full-splice_match	FAM133B	ENST00000445716.5	2026	11	1	114	0	-1	multi-exon	FALSE	canonical	1	225	junction_6	13967.196622443604	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	103	846	60.0	-4	True	AAAAAG	-13
PB.1192.4	chr1	-	1691	4	full-splice_match	C1orf198	ENST00000366663.9	3858	4	113	2054	113	448	multi-exon	FALSE	canonical	1	300289	junction_3	36754.306885951024	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	74	1012	30.0	-20	True	AAAAAG	-13
PB.3313.5	chr14	-	2326	13	novel_in_catalog	SLC7A7	novel	2263	11	NA	NA	160	-4	combination_of_known_junctions	FALSE	canonical	1	120	junction_11	110612.0814116714	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	410	1945	20.0	6556	False	AATAAA	-10
PB.3313.4	chr14	-	2084	10	full-splice_match	SLC7A7	ENST00000397529.6	2094	10	38	-28	-37	0	multi-exon	FALSE	canonical	1	5670	junction_9	91068.30703026176	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	164	1699	25.0	32	True	AATAAA	-14
PB.3313.2	chr14	-	2399	12	novel_in_catalog	SLC7A7	novel	2263	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	3206	junction_10	111002.85503029205	NA	1	1	TRUE	NA	NA	NA	C	coding	511	1536	479	2014	25.0	6368	False	AATAAA	-14
PB.11787.3	chr9	-	3956	8	novel_not_in_catalog	PPP6C	novel	4118	7	NA	NA	2	-83	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	346449.46434894874	NA	4	1	TRUE	NA	NA	NA	C	coding	305	918	64	981	50.0	4	True	AATAAA	-21
PB.6742.7	chr2	-	5717	8	novel_not_in_catalog	FAM168B	novel	5285	7	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	308311.90543006663	NA	15	2	TRUE	NA	NA	NA	C	coding	195	588	542	1129	20.0	10	True	AATAAA	-17
PB.10079.15	chr6	-	2528	12	incomplete-splice_match	IBTK	ENST00000369751.2	4437	24	-20	23142	-20	-23142	3prime_fragment	FALSE	canonical	1	141086	junction_11	53047.48675814314	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1956	571	2526	65.0	-31	False	AATACA	-4
PB.10079.14	chr6	-	2509	12	incomplete-splice_match	IBTK	ENST00000369751.2	4437	24	156	22985	73	-22985	3prime_fragment	FALSE	canonical	1	141086	junction_11	53047.48675814314	NA	2	NA	TRUE	NA	NA	NA	C	coding	705	2115	395	2509	70.0	145	False	NA	NA
PB.10079.16	chr6	-	1979	10	incomplete-splice_match	IBTK	ENST00000369751.2	4437	24	-12	26638	-12	-26638	3prime_fragment	FALSE	canonical	1	141086	junction_9	45517.4918020602	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1416	563	1978	50.0	-23	False	AAGAAA	-9
PB.10079.10	chr6	-	5784	29	novel_not_in_catalog	IBTK	novel	6054	29	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	93709.26466679579	NA	9	2	TRUE	NA	NA	NA	C	coding	1021	3066	563	3628	25.0	-23	False	AATAAA	-21
PB.10079.13	chr6	-	2764	13	incomplete-splice_match	IBTK	ENST00000369751.2	4437	24	10	21443	10	-21443	3prime_fragment	FALSE	canonical	1	141086	junction_12	50920.20481344371	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2223	541	2763	60.0	-1	True	NA	NA
PB.10079.12	chr6	-	3475	20	incomplete-splice_match	IBTK	ENST00000369751.2	4437	24	-12	9255	-12	-9255	3prime_fragment	FALSE	canonical	1	141086	junction_19	55902.89411533999	NA	1	NA	TRUE	NA	NA	NA	C	coding	971	2913	563	3475	10.0	-23	False	AATAAA	-20
PB.12359.6	chrX	+	1999	15	full-splice_match	DKC1	ENST00000369550.9	2577	15	117	461	-18	317	multi-exon	FALSE	canonical	1	661888	junction_1	178855.82883093585	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	94	1638	80.0	0	True	TTTAAA	-24
PB.939.6	chr1	+	6595	1	novel_in_catalog	PRDX6	novel	1751	5	NA	NA	14	1967	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	9	True	NA	NA
PB.12359.4	chrX	+	1613	15	full-splice_match	DKC1	ENST00000369550.9	2577	15	114	850	18	-72	multi-exon	FALSE	canonical	1	661888	junction_1	178855.82883093585	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1515	97	1611	40.0	-3	True	NA	NA
PB.12359.5	chrX	+	2757	2	novel_not_in_catalog	DKC1	novel	3079	14	NA	NA	19	-415	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-2	True	NA	NA
PB.12359.2	chrX	+	1565	14	incomplete-splice_match	DKC1	ENST00000369550.9	2577	15	122	1364	-13	53	3prime_fragment	FALSE	canonical	1	661888	junction_1	182308.35894314988	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1476	89	1564	25.0	5	True	NA	NA
PB.12359.3	chrX	+	2403	15	full-splice_match	DKC1	ENST00000369550.9	2577	15	-9	183	5	-182	multi-exon	FALSE	canonical	1	661888	junction_1	178855.82883093585	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	220	1764	50.0	5	True	NA	NA
PB.939.1	chr1	+	2796	2	full-splice_match	PRDX6	ENST00000460950.1	809	2	-20	-1967	-20	1967	multi-exon	FALSE	canonical	1	1964214	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	92	279	89	367	80.0	0	True	NA	NA
PB.12359.1	chrX	+	2300	15	full-splice_match	DKC1	ENST00000369550.9	2577	15	175	102	18	-101	multi-exon	FALSE	canonical	1	661888	junction_1	178855.82883093585	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	36	1580	5.0	18	True	ATTAAA	-25
PB.10415.17	chr7	+	4185	11	full-splice_match	AHR	ENST00000242057.8	6276	11	28	2063	28	-2063	multi-exon	FALSE	canonical	1	202168	junction_1	70868.73382112876	NA	1	NA	TRUE	NA	NA	NA	C	coding	848	2547	616	3162	25.0	-2	True	ATTAAA	-14
PB.7637.9	chr22	+	2821	21	full-splice_match	PPIL2	ENST00000335025.12	4929	21	5	2103	5	0	multi-exon	FALSE	canonical	1	79804	junction_20	96782.66513610534	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	87	1649	30.0	2	True	ATTAAA	-20
PB.11061.3	chr8	+	6308	7	full-splice_match	EXTL3	ENST00000220562.8	6483	7	173	2	-105	-2	multi-exon	FALSE	canonical	1	65126	junction_1	79919.96701909562	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	730	3489	20.0	-1	True	AATAAA	-22
PB.11061.2	chr8	+	6191	7	novel_in_catalog	EXTL3	novel	548	5	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	1	12465	junction_1	97038.51789438505	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	620	3379	30.0	5	True	AATAAA	-15
PB.7201.8	chr20	+	3327	30	novel_not_in_catalog	XRN2	novel	3437	30	NA	NA	482	-2	any annotated donor/acceptor	FALSE	canonical	1	6020	junction_1	204193.2734144887	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	150	2840	5.0	-1	True	AATAAA	-19
PB.11650.5	chr9	-	4317	6	novel_in_catalog	ZNF484	novel	3960	4	NA	NA	0	356	combination_of_known_junctions	FALSE	canonical	1	6672	junction_4	23473.814462928687	NA	2	1	TRUE	NA	NA	NA	C	coding	816	2451	314	2764	30.0	-1	True	NA	NA
PB.9617.15	chr5	-	4026	12	novel_in_catalog	FBXW11	novel	4539	13	NA	NA	0	-159	no_combination_of_known_junctions	FALSE	canonical	1	253	junction_10	101074.59810751186	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	465	1610	65.0	-12	True	NA	NA
PB.7201.5	chr20	+	3318	29	novel_in_catalog	XRN2	novel	3437	30	NA	NA	9	-2	no_combination_of_known_junctions	FALSE	canonical	1	7601	junction_12	209284.70871317416	NA	1	NA	TRUE	NA	NA	NA	C	coding	914	2745	87	2831	5.0	-32	True	AATAAA	-19
PB.7201.4	chr20	+	3394	30	full-splice_match	XRN2	ENST00000377191.4	3437	30	10	33	10	-33	multi-exon	FALSE	canonical	1	584434	junction_1	135095.9275827936	NA	17	1	TRUE	NA	NA	NA	C	coding	950	2853	86	2938	75.0	-31	True	NA	NA
PB.7201.7	chr20	+	3648	30	novel_not_in_catalog	XRN2	novel	3437	30	NA	NA	478	-5	any annotated donor/acceptor	FALSE	canonical	1	8888	junction_1	203773.62884242402	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2691	474	3164	5.0	-5	True	AATAAA	-16
PB.7201.6	chr20	+	1321	14	incomplete-splice_match	XRN2	ENST00000377191.4	3437	30	28	50763	28	-50763	3prime_fragment	FALSE	canonical	1	584434	junction_1	142722.90684283528	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1254	68	1321	75.0	-13	True	NA	NA
PB.7201.1	chr20	+	3458	30	novel_not_in_catalog	XRN2	novel	3437	30	NA	NA	-5	-2	any annotated donor/acceptor	TRUE	canonical	1	2630	junction_22	211130.24415204077	NA	2	NA	TRUE	NA	NA	NA	C	coding	956	2871	101	2971	5.0	-488	False	AATAAA	-19
PB.9315.32	chr5	+	3023	15	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	8	13	intron_retention	FALSE	canonical	1	29253	junction_7	117695.42529353258	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	488	2017	40.0	1	True	AATAAA	-30
PB.7201.3	chr20	+	3059	30	full-splice_match	XRN2	ENST00000377191.4	3437	30	7	371	7	-371	multi-exon	FALSE	canonical	1	584434	junction_1	135095.9275827936	NA	1	NA	TRUE	NA	NA	NA	C	coding	950	2853	89	2941	25.0	-34	True	AATAAA	-26
PB.7201.2	chr20	+	3303	29	novel_in_catalog	XRN2	novel	3437	30	NA	NA	4	-2	no_combination_of_known_junctions	TRUE	canonical	1	11718	junction_1	205406.66769262071	NA	2	NA	TRUE	NA	NA	NA	C	coding	873	2622	195	2816	5.0	-37	True	AATAAA	-19
PB.10984.3	chr8	+	1987	4	full-splice_match	NEIL2	ENST00000403422.7	2016	4	29	0	-1	0	multi-exon	FALSE	canonical	1	4327	junction_1	63374.872503926104	NA	3	NA	TRUE	NA	NA	NA	C	coding	271	816	100	915	5.0	20	True	AATAAA	-17
PB.542.1	chr1	+	2296	15	incomplete-splice_match	CCDC18	ENST00000401026.7	4552	28	324	56863	-29	5065	3prime_fragment	FALSE	canonical	1	6040	junction_1	18612.54468560034	NA	0	NA	TRUE	NA	NA	NA	B	coding	699	2097	199	2295	50.0	-37	True	NA	NA
PB.11061.6	chr8	+	3750	7	full-splice_match	EXTL3	ENST00000220562.8	6483	7	253	2480	-25	113	multi-exon	FALSE	canonical	1	65126	junction_1	79919.96701909562	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	650	3409	55.0	-16	True	NA	NA
PB.7839.1	chr22	-	3332	10	novel_not_in_catalog	POLDIP3	novel	3337	9	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	4328	junction_2	258891.73923037483	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	30	1121	10.0	-4	True	AATAAA	-16
PB.11240.11	chr8	-	5379	4	full-splice_match	RAD54B	ENST00000297592.5	1879	4	-53	-3447	-6	3447	multi-exon	FALSE	canonical	1	33331	junction_1	33425.5078146416	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	485	961	10.0	-1	True	AATACA	-19
PB.11650.4	chr9	-	4725	4	full-splice_match	ZNF484	ENST00000332591.6	2836	4	-4	-1885	-4	847	multi-exon	FALSE	canonical	1	13556	junction_3	22626.040224091845	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2451	231	2681	40.0	11	True	NA	NA
PB.962.4	chr1	+	3710	16	full-splice_match	SOAT1	ENST00000367619.7	6835	16	-36	3161	-36	-3158	multi-exon	FALSE	canonical	1	221616	junction_1	69227.83590306882	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	180	1832	25.0	-2237	False	NA	NA
PB.303.11	chr1	-	1758	17	full-splice_match	SF3A3	ENST00000373019.4	3673	17	931	984	5	104	multi-exon	FALSE	canonical	1	226807	junction_2	182529.00217824974	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	26	1531	30.0	31	True	AATAAA	-16
PB.4401.8	chr16	+	2564	4	full-splice_match	ZNF267	ENST00000300870.14	3317	4	30	723	-19	-218	multi-exon	FALSE	canonical	1	181312	junction_1	51860.57963638877	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	180	2411	60.0	-23	True	TATAAA	-4
PB.4401.6	chr16	+	2407	4	full-splice_match	ZNF267	ENST00000300870.14	3317	4	23	887	23	-382	multi-exon	FALSE	canonical	1	181312	junction_1	51860.57963638877	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2220	187	2406	65.0	-30	True	NA	NA
PB.4401.7	chr16	+	3737	3	incomplete-splice_match	ZNF267	ENST00000394846.7	680	5	-25	26143	24	-25945	3prime_fragment	FALSE	canonical	1	181312	junction_1	63182.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	82	249	186	434	20.0	-29	True	NA	NA
PB.4401.4	chr16	+	4527	4	full-splice_match	ZNF267	ENST00000300870.14	3317	4	23	-1233	23	1233	multi-exon	FALSE	canonical	1	181312	junction_1	51860.57963638877	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	187	2418	50.0	-30	True	NA	NA
PB.4401.5	chr16	+	3332	5	novel_not_in_catalog	ZNF267	novel	3317	4	NA	NA	23	-59	any annotated donor/acceptor	FALSE	canonical	1	3890	junction_1	135261.7822213189	NA	2	NA	TRUE	NA	NA	NA	C	coding	711	2136	380	2515	35.0	-30	True	AATAAA	-12
PB.4401.2	chr16	+	3222	4	full-splice_match	ZNF267	ENST00000300870.14	3317	4	36	59	-13	-59	multi-exon	FALSE	canonical	1	181312	junction_1	51860.57963638877	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	174	2405	35.0	-17	True	AATAAA	-12
PB.4401.3	chr16	+	3068	5	novel_not_in_catalog	ZNF267	novel	3317	4	NA	NA	22	-59	any annotated donor/acceptor	TRUE	canonical	1	248	junction_4	113409.06262370525	NA	2	NA	TRUE	NA	NA	NA	C	coding	687	2064	188	2251	35.0	-31	True	AATAAA	-12
PB.4401.1	chr16	+	2774	4	full-splice_match	ZNF267	ENST00000300870.14	3317	4	34	509	-15	-4	multi-exon	FALSE	canonical	1	181312	junction_1	51860.57963638877	NA	0	NA	TRUE	NA	NA	NA	C	coding	743	2232	176	2407	40.0	-19	True	AATAAA	-32
PB.11456.11	chr9	+	1638	5	novel_not_in_catalog	TYRP1	novel	2851	8	NA	NA	-267	-202	any annotated donor/acceptor	FALSE	canonical	1	2702	junction_1	204751.11685959127	NA	2	NA	TRUE	NA	NA	NA	C	coding	235	708	25	732	10.0	3	True	AGTAAA	-14
PB.9904.4	chr6	-	2432	3	novel_in_catalog	PSMB8	novel	835	2	NA	NA	3	-5	intron_retention	FALSE	canonical	1	1533958	junction_2	240017.5	NA	15	NA	TRUE	NA	NA	NA	C	coding	144	435	842	1276	20.0	2	True	AATAAA	-14
PB.7434.3	chr21	+	3220	6	novel_in_catalog	FP565260.3	novel	1162	7	NA	NA	16	3	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	211	1038	10.0	NA	False	NA	NA
PB.7434.2	chr21	+	2651	7	full-splice_match	FP565260.3	ENST00000623960.3	3274	7	-8	631	-7	15	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	195	1103	45.0	NA	False	NA	NA
PB.2406.1	chr12	+	1262	8	full-splice_match	CD9	ENST00000009180.9	1218	8	-38	-6	-23	6	multi-exon	FALSE	canonical	1	2367481	junction_2	788775.0644693146	NA	0	NA	TRUE	NA	NA	NA	A	coding	228	687	139	825	10.0	-38	True	AATAAA	-21
PB.9904.2	chr6	-	3302	1	novel_in_catalog	PSMB8	novel	1124	6	NA	NA	-3	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	144	435	821	1255	20.0	23	True	AATAAA	-14
PB.1882.10	chr11	+	5999	17	full-splice_match	HIPK3	ENST00000303296.8	7408	17	-246	1655	-246	-1652	multi-exon	FALSE	canonical	1	106765	junction_12	122236.05574742462	NA	1	NA	TRUE	NA	NA	NA	C	coding	1215	3648	552	4199	30.0	-55	True	ATTAAA	-17
PB.1882.11	chr11	+	7211	16	full-splice_match	HIPK3	ENST00000379016.7	7345	16	131	3	131	0	multi-exon	FALSE	canonical	1	180973	junction_1	98457.00855757638	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	175	3759	25.0	-2	True	ATTAAA	-17
PB.1882.12	chr11	+	6071	16	full-splice_match	HIPK3	ENST00000379016.7	7345	16	-224	1498	-224	-1495	multi-exon	FALSE	canonical	1	180973	junction_1	98457.00855757638	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3585	530	4114	25.0	-33	True	AATAAA	-30
PB.8589.7	chr3	+	4858	9	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1768	junction_1	279883.5490915988	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	890	2110	15.0	-11	True	AATAAA	-18
PB.8589.6	chr3	+	4784	10	novel_not_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	canonical	1	5363	junction_1	295086.14539524255	NA	3	NA	TRUE	NA	NA	NA	C	coding	282	849	720	1568	10.0	-12	True	AATAAA	-17
PB.8589.5	chr3	+	4728	9	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-4	1	no_combination_of_known_junctions	FALSE	canonical	1	1230	junction_2	290552.3714413419	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	759	1979	10.0	1	True	AATAAA	-19
PB.8589.4	chr3	+	4713	9	novel_not_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	1	5363	junction_1	279207.3886020927	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	746	1966	10.0	1	True	AATAAA	-17
PB.8589.3	chr3	+	4763	9	novel_not_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	794	junction_1	280067.33042249747	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	795	2015	15.0	0	True	AATAAA	-18
PB.8589.2	chr3	+	4360	8	full-splice_match	ST6GAL1	ENST00000169298.7	4645	8	283	2	-5	0	multi-exon	FALSE	canonical	1	139968	junction_1	215808.3766597826	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	392	1612	15.0	31	True	AATAAA	-18
PB.8589.1	chr3	+	4985	10	novel_not_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-179	-1	any annotated donor/acceptor	FALSE	canonical	1	2345	junction_2	294920.3425351695	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	1018	2238	10.0	-1045	False	AATAAA	-17
PB.8589.9	chr3	+	4700	9	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	17982	junction_6	277370.5077497595	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	635	1483	15.0	-11	True	AATAAA	-18
PB.7429.4	chr20	-	2045	5	full-splice_match	SAMD10	ENST00000369886.7	2181	5	129	7	129	-7	multi-exon	FALSE	canonical	1	22660	junction_4	37149.465826408596	NA	2	NA	TRUE	NA	NA	NA	C	coding	202	609	47	655	10.0	13	True	AATAAA	-11
PB.11056.4	chr8	+	2044	14	novel_in_catalog	ELP3	novel	545	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	12742	junction_4	95446.19972566224	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	434	1675	40.0	-26	True	AATAAA	-22
PB.4096.1	chr15	-	2587	4	antisense	novelGene_AC012409.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	482	junction_3	298.77564975896024	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-1	True	AATAAA	-26
PB.1144.7	chr1	+	5675	19	novel_in_catalog	CAPN2	novel	3264	21	NA	NA	150	-172	intron_retention	FALSE	canonical	1	108523	junction_10	501128.52584306657	NA	1	NA	TRUE	NA	NA	NA	B	coding	477	1434	160	1593	10.0	-4324	False	AATAAA	-28
PB.6786.30	chr2	-	1628	13	novel_not_in_catalog	PRPF40A	novel	8048	26	NA	NA	-15	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	381349.05086972885	NA	3	1	TRUE	NA	NA	NA	B	coding	304	912	716	1627	80.0	-9	True	TATAAA	-11
PB.10044.3	chr6	+	4249	4	full-splice_match	ZNF451	ENST00000370708.8	9478	4	116	5113	3	3650	multi-exon	FALSE	canonical	1	63635	junction_3	72220.43661057597	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	63	1742	90.0	0	True	TTTAAA	-9
PB.356.1	chr1	+	2430	13	full-splice_match	ST3GAL3	ENST00000351035.8	2388	13	-21	-21	-1	0	multi-exon	FALSE	canonical	1	11334	junction_4	51704.67715948594	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	202	1491	0.0	-13	True	AATAAA	-14
PB.2423.3	chr12	+	2942	6	novel_in_catalog	COPS7A	novel	2127	8	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	205211	junction_1	288533.70210594113	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	187	597	30.0	-9	True	AATAAA	-12
PB.7237.10	chr20	+	2715	8	novel_not_in_catalog	MAPRE1	novel	2623	7	NA	NA	310	-1	any annotated donor/acceptor	FALSE	canonical	1	19	junction_1	562536.3134491672	NA	3	1	TRUE	NA	NA	NA	C	coding	268	807	233	1039	25.0	249	False	AATAAA	-19
PB.7237.11	chr20	+	2602	7	novel_not_in_catalog	MAPRE1	novel	2623	7	NA	NA	355	-1	any annotated donor/acceptor	FALSE	canonical	1	4312	junction_1	516475.8703447174	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	120	926	25.0	294	False	AATAAA	-19
PB.9912.1	chr6	-	3165	4	novel_in_catalog	HLA-DOA	novel	3489	5	NA	NA	3	-6	no_combination_of_known_junctions	FALSE	canonical	1	4035	junction_2	60221.66315833162	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	41	511	30.0	-1	True	ATTAAA	-19
PB.6919.6	chr2	-	2490	25	incomplete-splice_match	PGAP1	ENST00000354764.8	11114	27	-21	11055	-7	-2720	3prime_fragment	FALSE	canonical	1	33582	junction_16	13833.565364457145	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2352	137	2488	60.0	-23	True	NA	NA
PB.2423.4	chr12	+	1846	8	full-splice_match	COPS7A	ENST00000539735.5	1832	8	25	-39	-7	-6	multi-exon	FALSE	canonical	1	98998	junction_1	282529.1647847337	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	191	1018	20.0	-26	True	AATAAA	-26
PB.6919.4	chr2	-	3631	27	full-splice_match	PGAP1	ENST00000354764.8	11114	27	-9	7492	0	843	multi-exon	FALSE	canonical	1	33582	junction_18	13326.415632474753	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	125	2893	50.0	-11	True	ATTAAA	-20
PB.6919.5	chr2	-	2775	27	full-splice_match	PGAP1	ENST00000354764.8	11114	27	-3	8342	-3	-7	multi-exon	FALSE	canonical	1	33582	junction_18	13326.415632474753	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2655	119	2773	5.0	-5	True	AGTAAA	-24
PB.6919.2	chr2	-	8449	26	novel_in_catalog	PGAP1	novel	11114	27	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	8185	junction_7	17287.32236987556	NA	7	NA	TRUE	NA	NA	NA	C	coding	592	1779	125	1903	30.0	-11	True	AATAAA	-20
PB.6919.3	chr2	-	3953	27	full-splice_match	PGAP1	ENST00000354764.8	11114	27	2	7159	1	1176	multi-exon	FALSE	canonical	1	33582	junction_18	13326.415632474753	NA	2	NA	TRUE	NA	NA	NA	C	coding	922	2769	114	2882	30.0	0	True	AATAAA	-18
PB.6919.1	chr2	-	8569	27	full-splice_match	PGAP1	ENST00000354764.8	11114	27	-35	2580	-21	6	multi-exon	TRUE	canonical	1	33582	junction_18	13326.415632474753	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	151	2919	30.0	-37	True	AATAAA	-20
PB.2438.1	chr12	+	2018	16	full-splice_match	PTPN6	ENST00000399448.5	2159	16	141	0	8	0	multi-exon	FALSE	canonical	1	32777	junction_1	451590.62985806074	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	9	1802	5.0	-7555	False	AATAAA	-18
PB.2438.2	chr12	+	2221	17	novel_in_catalog	PTPN6	novel	650	4	NA	NA	0	0	intron_retention	TRUE	canonical	1	386	junction_1	471027.53730056336	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	218	2005	5.0	0	True	AATAAA	-18
PB.2438.3	chr12	+	2036	15	novel_in_catalog	PTPN6	novel	650	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	2781	junction_1	468008.2012446252	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	150	1820	5.0	0	True	AATAAA	-18
PB.2438.4	chr12	+	1902	1	novel_in_catalog	PTPN6	novel	650	4	NA	NA	0	-3702	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.2438.5	chr12	+	2107	16	full-splice_match	PTPN6	ENST00000318974.13	2245	16	141	-3	-25	0	multi-exon	FALSE	canonical	1	571223	junction_1	368203.6281236783	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	104	1891	5.0	-8963	False	AATAAA	-18
PB.2438.6	chr12	+	2218	16	novel_not_in_catalog	PTPN6	novel	650	4	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2023	junction_9	483290.5349804217	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	230	2002	5.0	0	True	AATAAA	-18
PB.2438.7	chr12	+	2362	15	novel_in_catalog	PTPN6	novel	650	4	NA	NA	34	0	intron_retention	FALSE	canonical	1	17271	junction_2	495994.77798887115	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	608	1765	5.0	-20	True	AATAAA	-18
PB.2438.8	chr12	+	2258	15	novel_in_catalog	PTPN6	novel	650	4	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	571223	junction_1	380603.5578806485	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	163	1662	5.0	-5	True	AATAAA	-17
PB.2438.9	chr12	+	2132	16	novel_not_in_catalog	PTPN6	novel	650	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	10831	junction_15	481803.61862343876	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	158	2026	5.0	0	True	AATAAA	-18
PB.9065.1	chr4	-	1186	8	full-splice_match	HPF1	ENST00000393381.2	1230	8	39	5	-10	-5	multi-exon	FALSE	canonical	1	126962	junction_5	108865.90833606604	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	38	1078	15.0	29	True	AATAAA	-18
PB.1219.6	chr1	-	6267	29	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-3476	4	intron_retention	FALSE	non_canonical	0	0	junction_6	53984.45274491876	NA	26	3	TRUE	NA	NA	NA	C	coding	1013	3042	626	3667	30.0	-569	False	AATAAA	-18
PB.9912.5	chr6	-	3591	5	novel_in_catalog	HLA-DOA	novel	3489	5	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	7434	junction_4	61161.94082515695	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	277	939	35.0	-4	True	ATTAAA	-17
PB.6231.3	chr19	+	3151	8	full-splice_match	ZFP28	ENST00000301318.7	4096	8	9	936	4	-936	multi-exon	FALSE	canonical	1	34954	junction_7	8660.811440986723	NA	1	NA	TRUE	NA	NA	NA	C	coding	868	2607	63	2669	30.0	NA	False	ATTAAA	-16
PB.6231.2	chr19	+	2981	7	full-splice_match	ZFP28	ENST00000591844.5	3475	7	-4	498	1	-498	multi-exon	FALSE	canonical	1	34987	junction_1	7312.250233151368	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	71	1120	25.0	NA	False	GATAAA	-27
PB.6231.1	chr19	+	2952	8	full-splice_match	ZFP28	ENST00000301318.7	4096	8	-49	1193	-49	-1193	multi-exon	FALSE	canonical	1	34954	junction_7	8660.811440986723	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	121	2727	45.0	NA	False	NA	NA
PB.9912.6	chr6	-	3416	5	novel_in_catalog	HLA-DOA	novel	3489	5	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	1	7504	junction_2	59647.237720513935	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	55	852	35.0	-15	True	ATTAAA	-17
PB.6231.5	chr19	+	4024	8	full-splice_match	ZFP28	ENST00000301318.7	4096	8	36	36	31	-36	multi-exon	FALSE	canonical	1	34954	junction_7	8660.811440986723	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	36	2642	60.0	NA	False	AATAAA	-7
PB.6231.4	chr19	+	2762	8	novel_not_in_catalog	ZFP28	novel	4096	8	NA	NA	14	-514	any annotated donor/acceptor	FALSE	canonical	1	6902	junction_7	16655.801155226636	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	53	1021	25.0	NA	False	GATAAA	-11
PB.10211.24	chr6	-	2254	15	incomplete-splice_match	EPB41L2	ENST00000337057.7	4457	20	47	30704	-17	26	3prime_fragment	FALSE	canonical	1	156605	junction_2	123940.30698909464	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2118	136	2253	55.0	2	True	NA	NA
PB.10211.25	chr6	-	2013	13	incomplete-splice_match	EPB41L2	ENST00000628542.2	4247	18	78	30704	-1	26	3prime_fragment	FALSE	canonical	1	278245	junction_1	89955.52306414019	NA	1	1	TRUE	NA	NA	NA	C	coding	636	1908	105	2012	55.0	0	True	NA	NA
PB.9912.7	chr6	-	3225	6	novel_not_in_catalog	HLA-DOA	novel	3489	5	NA	NA	10	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58305.089523985815	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	67	819	35.0	-27	True	ATTAAA	-17
PB.10211.20	chr6	-	3478	18	full-splice_match	EPB41L2	ENST00000628542.2	4247	18	72	697	1	91	multi-exon	FALSE	canonical	1	278245	junction_6	132011.04728454596	NA	1	NA	TRUE	NA	NA	NA	C	coding	935	2808	111	2918	40.0	-6	True	ATTAAA	-19
PB.7819.1	chr22	-	1239	8	full-splice_match	PMM1	ENST00000216259.7	1298	8	55	4	-6	-4	multi-exon	FALSE	canonical	1	225207	junction_7	172845.3728794518	NA	0	NA	TRUE	NA	NA	NA	A	coding	262	789	31	819	20.0	-8	True	ATTAAA	-17
PB.10211.22	chr6	-	3148	18	full-splice_match	EPB41L2	ENST00000628542.2	4247	18	71	1028	0	1	multi-exon	FALSE	canonical	1	278245	junction_6	132011.04728454596	NA	0	NA	TRUE	NA	NA	NA	C	coding	935	2808	112	2919	25.0	-7	True	AATATA	-25
PB.10211.23	chr6	-	2952	18	novel_in_catalog	EPB41L2	novel	2994	5	NA	NA	-1	1	intron_retention	FALSE	canonical	1	43565	junction_5	162819.98232875575	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	165	2723	25.0	-27	False	AATATA	-25
PB.4045.2	chr15	+	4498	6	intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	155	468	3723	4190	20.0	NA	False	NA	NA
PB.4045.1	chr15	+	4587	7	intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	155	468	3812	4279	20.0	NA	False	NA	NA
PB.321.1	chr1	-	1533	1	full-splice_match	AL050341.2	ENST00000567508.1	1541	1	12	-4	12	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-8	True	NA	NA
PB.11663.4	chr9	+	2246	8	full-splice_match	C9orf3	ENST00000277198.6	1966	8	19	-299	8	299	multi-exon	FALSE	canonical	1	13295	junction_7	11087.014964196924	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	168	1868	85.0	2	True	NA	NA
PB.8673.8	chr4	+	4044	14	incomplete-splice_match	RGS12	ENST00000338806.4	3010	16	15827	7732	7	-77	internal_fragment	FALSE	canonical	1	33397	junction_1	47748.15008666016	NA	1	NA	TRUE	NA	NA	NA	B	coding	718	2157	687	2843	20.0	15	True	AATAAA	-17
PB.852.44	chr1	-	4163	33	full-splice_match	COPA	ENST00000241704.7	4789	33	125	501	-2	7	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	15	1	TRUE	NA	NA	NA	C	coding	1224	3675	106	3780	70.0	-29	True	NA	NA
PB.5400.4	chr18	+	1825	4	full-splice_match	TUBB6	ENST00000317702.9	2064	4	188	51	0	5	multi-exon	FALSE	canonical	1	1486064	junction_3	189139.65856360097	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	47	1387	20.0	6	True	AATAAA	-20
PB.389.2	chr1	-	2596	12	novel_in_catalog	MKNK1	novel	2809	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	89228	junction_11	73527.03947090058	NA	3	1	TRUE	NA	NA	NA	C	coding	347	1044	199	1242	5.0	4	True	AATAAA	-23
PB.389.3	chr1	-	2721	14	novel_in_catalog	MKNK1	novel	2809	14	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	2487	junction_6	105878.08359629328	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	158	1555	5.0	3	True	AATAAA	-22
PB.389.4	chr1	-	2629	13	full-splice_match	MKNK1	ENST00000371945.9	2618	13	-1	-10	-1	-1	multi-exon	FALSE	canonical	1	70442	junction_2	84677.31682819326	NA	2	1	TRUE	NA	NA	NA	C	coding	424	1275	189	1463	5.0	14	True	AATAAA	-22
PB.11886.1	chr9	-	3249	21	full-splice_match	SARDH	ENST00000439388.5	3216	21	-24	-9	-24	5	multi-exon	TRUE	canonical	1	14732	junction_20	11343.287028458726	NA	0	NA	TRUE	NA	NA	NA	A	coding	918	2757	159	2915	35.0	1573	False	AAAACA	-4
PB.6320.10	chr2	+	4348	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	116	-5	any annotated donor/acceptor	FALSE	canonical	1	722	junction_2	150241.3523952562	NA	8	NA	TRUE	NA	NA	NA	C	coding	188	567	1847	2413	35.0	0	True	AATAAA	-17
PB.9655.1	chr5	+	2334	5	full-splice_match	N4BP3	ENST00000274605.5	6080	5	96	3650	96	-3650	multi-exon	FALSE	canonical	1	42632	junction_1	31145.96103429785	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	264	1898	20.0	7	True	NA	NA
PB.8473.59	chr3	+	4477	9	novel_not_in_catalog	MBNL1	novel	6422	10	NA	NA	53629	-1	any annotated donor/acceptor	FALSE	canonical	1	106	junction_1	358345.3149228932	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	64	1065	25.0	6	True	AATAAA	-36
PB.8436.1	chr3	-	2158	1	antisense	novelGene_ZBTB38_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	7765	False	ACTAAA	-15
PB.8473.51	chr3	+	5453	11	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-198	0	combination_of_known_junctions	FALSE	canonical	1	44741	junction_1	388644.88965173595	NA	5	NA	TRUE	NA	NA	NA	C	coding	400	1203	838	2040	25.0	-1	True	AATAAA	-37
PB.8473.50	chr3	+	3551	11	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	32	525	combination_of_known_junctions	FALSE	canonical	1	44741	junction_1	388644.88965173595	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	1031	2233	80.0	0	True	NA	NA
PB.8473.52	chr3	+	5387	10	novel_not_in_catalog	MBNL1	novel	1039	3	NA	NA	-184	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	344464.58159455395	NA	4	NA	TRUE	NA	NA	NA	C	coding	382	1149	826	1974	25.0	13	True	AATAAA	-37
PB.8575.2	chr3	-	3236	10	full-splice_match	LIPH	ENST00000296252.8	4026	10	7	783	7	-783	multi-exon	FALSE	canonical	1	48668	junction_9	5250.629424937994	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	520	1491	10.0	6	True	ATTAAA	-17
PB.5400.2	chr18	+	1735	3	full-splice_match	TUBB6	ENST00000590103.5	1075	3	-6	-654	-6	5	multi-exon	FALSE	canonical	1	32883	junction_2	955113.5	NA	11	2	TRUE	NA	NA	NA	C	coding	409	1230	68	1297	20.0	-330	False	AATAAA	-20
PB.8575.3	chr3	-	4114	10	novel_not_in_catalog	LIPH	novel	4026	10	NA	NA	-25	-785	any annotated donor/acceptor	TRUE	canonical	1	1371	junction_7	18707.83273140352	NA	4	NA	TRUE	NA	NA	NA	C	coding	139	420	1952	2371	15.0	1	True	ATTAAA	-15
PB.1152.4	chr1	-	3937	15	novel_not_in_catalog	WDR26	novel	7367	14	NA	NA	16	1295	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	268732.60770012863	NA	1	NA	TRUE	NA	NA	NA	B	coding	498	1497	447	1943	30.0	15	True	AATAAA	-23
PB.1152.5	chr1	-	3946	15	novel_not_in_catalog	WDR26	novel	7367	14	NA	NA	-14	1292	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	286734.17452785146	NA	3	NA	TRUE	NA	NA	NA	B	coding	514	1545	411	1955	35.0	-15	True	AATAAA	-20
PB.5400.3	chr18	+	1503	4	full-splice_match	TUBB6	ENST00000591909.5	1017	4	13	-499	0	499	multi-exon	FALSE	canonical	1	194523	junction_3	788716.1419219351	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	47	361	85.0	6	True	NA	NA
PB.11267.1	chr8	-	2064	17	novel_in_catalog	RGS22	novel	4296	28	NA	NA	-2	0	intron_retention	TRUE	canonical	1	869	junction_16	4086.3607261688244	NA	1	NA	TRUE	NA	NA	NA	A	coding	600	1803	71	1873	30.0	NA	False	AATAAA	-21
PB.8575.1	chr3	-	3880	9	novel_in_catalog	LIPH	novel	4026	10	NA	NA	1	0	no_combination_of_known_junctions	TRUE	canonical	1	4236	junction_5	19154.044551673676	NA	2	NA	TRUE	NA	NA	NA	C	coding	293	882	471	1352	20.0	27	True	AATAAA	-17
PB.472.13	chr1	-	3430	13	full-splice_match	ANKRD13C	ENST00000370944.8	4069	13	-7	646	5	3	multi-exon	FALSE	canonical	1	168349	junction_12	32057.739799873427	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	322	1947	30.0	-8	True	AATAAA	-18
PB.1144.6	chr1	+	2027	16	novel_not_in_catalog	CAPN2	novel	3264	21	NA	NA	96	-2812	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	551521.582805178	NA	3	1	TRUE	NA	NA	NA	B	coding	503	1512	214	1725	55.0	-4378	False	GGGGCT	-33
PB.1046.10	chr1	-	6221	5	novel_not_in_catalog	CHI3L1	novel	1920	2	NA	NA	-50	-6	intron_retention	FALSE	canonical	1	23074	junction_2	419925.2808402347	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	5354	5713	10.0	-54	False	AATAAA	-14
PB.8928.8	chr4	+	4342	22	novel_in_catalog	SEC24B	novel	4066	25	NA	NA	15	-438	no_combination_of_known_junctions	FALSE	canonical	1	7864	junction_2	93402.03192351962	NA	1	NA	TRUE	NA	NA	NA	C	coding	1172	3519	41	3559	10.0	4	True	ATTAAA	-19
PB.8928.9	chr4	+	4304	22	novel_in_catalog	SEC24B	novel	4066	25	NA	NA	23	-444	no_combination_of_known_junctions	FALSE	canonical	1	277	junction_12	96418.31576527012	NA	0	NA	TRUE	NA	NA	NA	C	coding	1164	3495	33	3527	20.0	12	True	ATTAAA	-13
PB.6583.1	chr2	+	2357	1	antisense	novelGene_GCFC2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	3	True	AATAAA	-27
PB.6043.3	chr19	-	2029	13	novel_not_in_catalog	SMG9	novel	5510	14	NA	NA	-1116	239	any annotated donor/acceptor	FALSE	canonical	1	3054	junction_12	121459.97215758299	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	202	1584	15.0	-4	True	AATAAA	-17
PB.8928.4	chr4	+	4622	24	novel_in_catalog	SEC24B	novel	4066	25	NA	NA	11	-438	combination_of_known_junctions	FALSE	canonical	1	5011	junction_1	96435.4442600307	NA	1	NA	TRUE	NA	NA	NA	C	coding	1264	3795	45	3839	10.0	0	True	ATTAAA	-19
PB.8928.5	chr4	+	1664	3	incomplete-splice_match	SEC24B	ENST00000399100.6	3780	23	13	65950	11	-65950	3prime_fragment	FALSE	canonical	1	58591	junction_1	121287.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	45	1112	10.0	0	True	AATAAA	-16
PB.8928.6	chr4	+	4444	23	novel_in_catalog	SEC24B	novel	4066	25	NA	NA	13	-441	no_combination_of_known_junctions	FALSE	canonical	1	423	junction_6	103978.36906807999	NA	2	1	TRUE	NA	NA	NA	C	coding	513	1542	43	1584	15.0	2	True	ATTAAA	-16
PB.8928.7	chr4	+	4447	23	novel_not_in_catalog	SEC24B	novel	4066	25	NA	NA	15	-443	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	103562.94613949001	NA	8	2	TRUE	NA	NA	NA	C	coding	733	2202	1468	3669	20.0	4	True	ATTAAA	-14
PB.927.10	chr1	-	2715	20	full-splice_match	KIFAP3	ENST00000361580.6	2957	20	-14	256	-14	-251	multi-exon	FALSE	canonical	1	245365	junction_13	64568.77175689426	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	243	2621	5.0	-58	True	NA	NA
PB.9458.9	chr5	+	6456	25	novel_not_in_catalog	SEC24A	novel	6299	23	NA	NA	6	85	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	102975.6813270533	NA	28	3	TRUE	NA	NA	NA	C	coding	1119	3360	283	3642	35.0	-11	True	AATAAA	-19
PB.8928.2	chr4	+	4638	24	full-splice_match	SEC24B	ENST00000265175.5	5083	24	4	441	4	-441	multi-exon	FALSE	canonical	1	58591	junction_1	89658.15451373665	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	52	3858	15.0	-7	True	ATTAAA	-16
PB.8928.3	chr4	+	4727	25	novel_in_catalog	SEC24B	novel	4066	25	NA	NA	11	-438	combination_of_known_junctions	FALSE	canonical	1	5011	junction_1	105771.16720185637	NA	1	1	TRUE	NA	NA	NA	C	coding	1299	3900	45	3944	10.0	0	True	ATTAAA	-19
PB.6402.7	chr2	+	3375	14	full-splice_match	SLC30A6	ENST00000282587.9	5089	14	-4	1718	-4	921	multi-exon	FALSE	canonical	1	91258	junction_1	29624.684274751322	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	42	1427	45.0	-5	True	AATACA	-24
PB.2498.15	chr12	-	3153	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-16	414	combination_of_known_junctions	FALSE	canonical	1	32243	junction_15	141781.72780527428	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	398	2347	75.0	-17	True	NA	NA
PB.2498.16	chr12	-	3046	16	full-splice_match	RECQL	ENST00000421138.6	2572	16	-60	-414	-16	414	multi-exon	FALSE	canonical	1	85686	junction_15	132580.6780516008	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	291	2240	75.0	-17	True	NA	NA
PB.2498.17	chr12	-	3028	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	12	414	combination_of_known_junctions	FALSE	canonical	1	34343	junction_15	141407.75922410417	NA	1	1	TRUE	NA	NA	NA	C	coding	649	1950	273	2222	75.0	-49	True	NA	NA
PB.2498.10	chr12	-	3565	17	novel_not_in_catalog	RECQL	novel	3702	15	NA	NA	-26	0	any annotated donor/acceptor	FALSE	canonical	1	1447	junction_1	191268.03516363987	NA	3	NA	TRUE	NA	NA	NA	C	coding	624	1875	251	2125	30.0	-27	True	AATAAA	-22
PB.2498.11	chr12	-	3438	15	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	13259	junction_14	145066.85957736094	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	206	2155	30.0	-28	True	AATAAA	-22
PB.2498.12	chr12	-	3640	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	1	4273	junction_15	146850.02846223762	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	409	2358	30.0	-46	True	AATAAA	-21
PB.2295.1	chr11	+	2701	1	genic	PAFAH1B2	novel	NA	NA	NA	NA	-2	-14298	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-320	False	NA	NA
PB.2498.18	chr12	-	2999	16	novel_in_catalog	RECQL	novel	3702	15	NA	NA	23	414	combination_of_known_junctions	FALSE	canonical	1	9637	junction_15	145865.83122253133	NA	3	NA	TRUE	NA	NA	NA	C	coding	649	1950	244	2193	75.0	-38	True	NA	NA
PB.2498.19	chr12	-	2962	15	novel_in_catalog	RECQL	novel	3702	15	NA	NA	-28	414	combination_of_known_junctions	FALSE	canonical	1	13259	junction_14	145066.85957736094	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	207	2156	75.0	-29	True	NA	NA
PB.6402.9	chr2	+	4927	15	full-splice_match	SLC30A6	ENST00000379343.6	2354	15	2	-2575	2	0	multi-exon	FALSE	canonical	1	8341	junction_4	59049.77063823848	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	36	1541	25.0	1	True	ATTAAA	-33
PB.6402.8	chr2	+	5039	13	novel_in_catalog	SLC30A6	novel	4758	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	37001	junction_8	45114.49861763769	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	580	1374	10.0	-1	True	ATTAAA	-18
PB.963.3	chr1	-	4344	7	novel_not_in_catalog	TOR1AIP2	novel	7905	6	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	18407	junction_5	71202.43398929562	NA	3	NA	TRUE	NA	NA	NA	C	coding	470	1413	790	2202	35.0	-1	True	AATAAA	-25
PB.574.3	chr1	+	2975	3	novel_not_in_catalog	S1PR1	novel	825	2	NA	NA	5	-5	any annotated donor/acceptor	TRUE	canonical	1	830	junction_1	154.0	NA	11	NA	TRUE	NA	NA	NA	C	coding	382	1149	447	1595	35.0	3	True	AATAAA	-12
PB.2419.29	chr12	-	2848	19	incomplete-splice_match	CHD4	ENST00000644289.1	5007	32	11803	-21	71	15	5prime_fragment	FALSE	canonical	1	828702	junction_16	247446.50026295744	NA	0	NA	TRUE	NA	NA	NA	C	coding	935	2805	44	2848	30.0	8579	False	AATAGA	-26
PB.11507.5	chr9	-	4135	28	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12291	junction_27	84405.0280854745	NA	1	NA	TRUE	NA	NA	NA	C	coding	1081	3246	79	3324	5.0	-1	True	AATAAA	-15
PB.11646.55	chr9	-	2740	20	incomplete-splice_match	IARS	ENST00000375643.7	4656	34	-13	46150	3	0	3prime_fragment	FALSE	canonical	1	244110	junction_19	280451.1270465968	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	281	2488	80.0	-19	True	NA	NA
PB.7129.4	chr20	+	4270	7	full-splice_match	PSMF1	ENST00000335877.10	4290	7	20	0	8	0	multi-exon	FALSE	canonical	1	632364	junction_1	385159.8961313196	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	157	972	15.0	-3	True	AATAAA	-20
PB.7129.5	chr20	+	3209	7	full-splice_match	PSMF1	ENST00000335877.10	4290	7	23	1058	11	-8	multi-exon	FALSE	canonical	1	632364	junction_1	385159.8961313196	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	154	969	15.0	0	True	AATAAA	-16
PB.7129.6	chr20	+	2011	7	full-splice_match	PSMF1	ENST00000246015.8	2042	7	23	8	11	-8	multi-exon	FALSE	canonical	1	142199	junction_6	588050.3460159446	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	154	945	15.0	0	True	AATAAA	-16
PB.7129.7	chr20	+	1364	7	full-splice_match	PSMF1	ENST00000335877.10	4290	7	24	2902	12	417	multi-exon	FALSE	canonical	1	632364	junction_1	385159.8961313196	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	153	968	15.0	1	True	AATACA	-19
PB.6772.15	chr2	-	1679	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-12	4863	2	1051	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	121	1431	25.0	1	True	AATAAA	-20
PB.2516.10	chr12	+	2103	6	full-splice_match	FGFR1OP2	ENST00000327214.5	2790	6	-6	693	-3	-596	multi-exon	FALSE	canonical	1	246722	junction_5	110471.88374351186	NA	1	NA	TRUE	NA	NA	NA	C	coding	215	648	232	879	35.0	-10	True	ATTAAA	-31
PB.7129.2	chr20	+	3144	6	novel_in_catalog	PSMF1	novel	3686	8	NA	NA	4	-9	combination_of_known_junctions	FALSE	canonical	1	14933	junction_2	584523.0286989898	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	447	905	10.0	-19	True	AATAAA	-15
PB.2516.12	chr12	+	3966	2	full-splice_match	FGFR1OP2	ENST00000538172.1	2945	2	547	-1568	547	-2	multi-exon	FALSE	canonical	1	246722	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	7805	False	ATTAAA	-20
PB.6772.19	chr2	-	1556	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-26	5000	-2	914	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	135	1445	20.0	801	False	TATAAA	-15
PB.6772.18	chr2	-	2891	14	novel_in_catalog	ORC4	novel	6472	13	NA	NA	0	920	combination_of_known_junctions	FALSE	canonical	1	14457	junction_1	123571.29114495312	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	147	1529	15.0	-1	True	TATAAA	-21
PB.1166.27	chr1	-	1719	11	incomplete-splice_match	PARP1	ENST00000366794.9	3958	23	-17	18936	-11	9071	3prime_fragment	FALSE	canonical	1	256970	junction_1	352804.71676638623	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1557	162	1718	60.0	-1	True	NA	NA
PB.7129.8	chr20	+	3105	8	novel_not_in_catalog	PSMF1	novel	3686	8	NA	NA	12	-8	any annotated donor/acceptor	FALSE	canonical	1	1299	junction_1	602564.3768969963	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	50	865	15.0	1	True	AATAAA	-16
PB.9366.1	chr5	+	1961	1	intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	97	294	118	411	80.0	-904	False	TTTAAA	-38
PB.7803.5	chr22	+	1765	12	full-splice_match	ADSL	ENST00000342312.9	1808	12	26	17	0	-17	multi-exon	FALSE	canonical	1	97092	junction_11	433965.22269978735	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	31	1308	95.0	0	True	NA	NA
PB.7803.4	chr22	+	1942	13	full-splice_match	ADSL	ENST00000623063.3	4359	13	29	2388	0	-17	multi-exon	FALSE	canonical	1	483512	junction_1	297902.47430505906	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	31	1485	95.0	0	True	NA	NA
PB.7803.7	chr22	+	1708	13	full-splice_match	ADSL	ENST00000623063.3	4359	13	31	2620	1	133	multi-exon	FALSE	canonical	1	483512	junction_1	297902.47430505906	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	29	1483	20.0	2	True	AGTAAA	-16
PB.7803.6	chr22	+	2859	12	novel_in_catalog	ADSL	novel	847	7	NA	NA	1	-3	intron_retention	FALSE	canonical	1	483512	junction_1	303067.5569953678	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	29	1099	40.0	2	True	ATTAAA	-14
PB.1482.10	chr10	+	7912	18	full-splice_match	KAT6B	ENST00000287239.9	8348	18	36	400	0	1	multi-exon	FALSE	canonical	1	29312	junction_1	43207.37906325227	NA	2	NA	TRUE	NA	NA	NA	C	coding	2073	6222	515	6736	85.0	0	True	NA	NA
PB.1482.11	chr10	+	7442	18	full-splice_match	KAT6B	ENST00000648892.1	7625	18	187	-4	0	4	multi-exon	FALSE	canonical	1	29312	junction_1	43314.19250475646	NA	2	NA	TRUE	NA	NA	NA	C	coding	1781	5346	515	5860	15.0	0	True	AATAAA	-22
PB.7803.3	chr22	+	1361	12	full-splice_match	ADSL	ENST00000342312.9	1808	12	16	431	1	9	multi-exon	FALSE	canonical	1	97092	junction_11	433965.22269978735	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	41	1318	35.0	-10	True	ATTAAA	-26
PB.7803.2	chr22	+	1909	14	novel_in_catalog	ADSL	novel	847	7	NA	NA	0	-148	combination_of_known_junctions	FALSE	canonical	1	4231	junction_13	419499.6603143676	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	57	1637	45.0	3	True	AATAAA	-25
PB.3584.3	chr14	-	3003	2	intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	A	coding	423	1272	875	2146	30.0	-26	True	AATAAA	-14
PB.3584.2	chr14	-	3229	2	intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	coding	423	1272	1101	2372	30.0	10002	False	AATAAA	-14
PB.3584.1	chr14	-	4192	1	full-splice_match	IRF2BPL	ENST00000238647.4	4157	1	-37	2	-37	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	796	2391	945	3335	30.0	9418	False	AATAAA	-14
PB.8973.3	chr4	-	7082	4	full-splice_match	ANKRD50	ENST00000515641.1	4212	4	4	-2874	4	-433	multi-exon	FALSE	canonical	1	762	junction_3	54318.726623513554	NA	0	NA	TRUE	NA	NA	NA	C	coding	1250	3753	297	4049	25.0	3	True	AATAAA	-19
PB.8973.4	chr4	-	8361	5	full-splice_match	ANKRD50	ENST00000504087.5	8794	5	0	433	0	-433	multi-exon	FALSE	canonical	1	93396	junction_4	11157.245728673362	NA	0	NA	TRUE	NA	NA	NA	C	coding	1429	4290	1039	5328	25.0	-1	True	AATAAA	-19
PB.3584.6	chr14	-	3707	1	full-splice_match	IRF2BPL	ENST00000238647.4	4157	1	-29	479	-29	-479	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	796	2391	937	3327	75.0	-30	True	NA	NA
PB.3584.5	chr14	-	2011	1	full-splice_match	IRF2BPL	ENST00000238647.4	4157	1	2143	3	2143	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	384	1155	1	1155	30.0	7460	False	AATAAA	-13
PB.3584.4	chr14	-	2950	2	intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	A	coding	423	1272	822	2093	30.0	-22	True	AATAAA	-14
PB.5928.3	chr19	+	3768	16	novel_in_catalog	MAG	novel	2390	11	NA	NA	-5	33551	no_combination_of_known_junctions	FALSE	canonical	1	4265	junction_3	196761.551702291	NA	2	NA	TRUE	NA	NA	NA	B	coding	727	2184	927	3110	40.0	-9611	False	AATAAA	-21
PB.5928.2	chr19	+	1780	4	incomplete-splice_match	MAG	ENST00000537831.2	2341	11	17940	-1007	295	1007	5prime_fragment	FALSE	canonical	1	171047	junction_3	2866.1733296427756	NA	2	NA	TRUE	NA	NA	NA	B	coding	117	354	70	423	25.0	-6	True	TATAAA	-14
PB.5928.1	chr19	+	3538	17	novel_in_catalog	MAG	novel	2390	11	NA	NA	281	33551	no_combination_of_known_junctions	FALSE	canonical	1	4265	junction_3	192501.5655062966	NA	0	NA	TRUE	NA	NA	NA	B	coding	847	2544	337	2880	40.0	-20	True	AATAAA	-21
PB.6434.3	chr2	+	2497	19	incomplete-splice_match	EML4	ENST00000318522.9	5549	23	-7	14950	-7	-2400	3prime_fragment	FALSE	canonical	1	180220	junction_6	76028.42853170123	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2226	270	2495	5.0	-10	True	AAAACA	-14
PB.5928.7	chr19	+	3735	17	novel_in_catalog	MAG	novel	2390	11	NA	NA	78	33551	no_combination_of_known_junctions	FALSE	canonical	1	4265	junction_3	195296.02703040166	NA	3	3	TRUE	NA	NA	NA	B	coding	727	2184	894	3077	40.0	-4	True	AATAAA	-21
PB.5928.6	chr19	+	3985	18	novel_not_in_catalog	MAG	novel	2390	11	NA	NA	66	33551	any annotated donor/acceptor	FALSE	canonical	1	3235	junction_4	199316.82454740469	NA	11	1	TRUE	NA	NA	NA	B	coding	847	2544	784	3327	40.0	-16	True	AATAAA	-21
PB.5754.18	chr19	-	3689	27	novel_not_in_catalog	TNPO2	novel	5122	26	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	207413.42220244402	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	297	2960	80.0	-3	True	NA	NA
PB.5928.4	chr19	+	3666	18	novel_not_in_catalog	MAG	novel	2390	11	NA	NA	287	33551	any annotated donor/acceptor	FALSE	canonical	1	3235	junction_4	193566.69789939266	NA	2	NA	TRUE	NA	NA	NA	B	coding	845	2538	471	3008	40.0	-14	True	AATAAA	-21
PB.6434.8	chr2	+	5630	24	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	1	-36	any annotated donor/acceptor	FALSE	canonical	1	189	junction_2	132951.1637052435	NA	2	NA	TRUE	NA	NA	NA	C	coding	902	2709	617	3325	80.0	1	True	NA	NA
PB.5754.17	chr19	-	3716	27	novel_not_in_catalog	TNPO2	novel	5122	26	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	223505.5175403557	NA	2	1	TRUE	NA	NA	NA	C	coding	897	2694	295	2988	80.0	-1	True	NA	NA
PB.5754.14	chr19	-	4450	25	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	1	97882	junction_24	169456.39192264984	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	196	2859	80.0	-1	True	NA	NA
PB.5754.15	chr19	-	4987	25	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	29	0	intron_retention	FALSE	canonical	1	168962	junction_24	161512.5100116033	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	733	3396	80.0	-36	True	NA	NA
PB.5754.12	chr19	-	4518	26	novel_not_in_catalog	TNPO2	novel	5122	26	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	135	junction_25	194678.97529910723	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	264	2927	80.0	-1	True	NA	NA
PB.5754.13	chr19	-	4519	25	full-splice_match	TNPO2	ENST00000356861.9	4962	25	-29	472	-29	0	multi-exon	FALSE	canonical	1	19007	junction_24	179179.41433510778	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	265	2928	80.0	-10	True	NA	NA
PB.2367.1	chr11	-	2236	8	full-splice_match	ETS1	ENST00000319397.6	2231	8	6	-11	6	11	multi-exon	FALSE	canonical	1	442863	junction_2	149165.92487028718	NA	1	NA	TRUE	NA	NA	NA	A	coding	441	1326	305	1630	40.0	-1	True	ATTAAA	-25
PB.5754.11	chr19	-	4602	26	full-splice_match	TNPO2	ENST00000425528.5	5122	26	41	479	-23	0	multi-exon	FALSE	canonical	1	89155	junction_5	201954.16350863778	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	318	3011	80.0	-24	True	NA	NA
PB.10985.14	chr8	+	1863	7	full-splice_match	FDFT1	ENST00000525954.5	1890	7	38	-11	-35	11	multi-exon	FALSE	canonical	1	2356622	junction_5	245477.5399621906	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	64	1494	45.0	-13	True	ATTAAA	-32
PB.11050.16	chr8	+	3917	30	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	3	-37	combination_of_known_junctions	FALSE	canonical	1	53763	junction_1	163082.94518632794	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	174	3077	20.0	-5	True	CATAAA	-21
PB.4667.1	chr17	-	3451	7	full-splice_match	SHPK	ENST00000225519.3	3838	7	50	337	50	-337	multi-exon	FALSE	canonical	1	69686	junction_6	27694.424381191882	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	54	1490	15.0	7	True	NA	NA
PB.4667.2	chr17	-	3166	7	full-splice_match	SHPK	ENST00000225519.3	3838	7	42	630	42	-630	multi-exon	FALSE	canonical	1	69686	junction_6	27694.424381191882	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	62	1498	15.0	-1	True	NA	NA
PB.6643.1	chr2	-	2981	6	novel_in_catalog	FAHD2B	novel	1388	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	7539	junction_3	42937.62029735695	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	NA	False	AATAAA	-20
PB.11275.5	chr8	-	3011	6	full-splice_match	YWHAZ	ENST00000353245.7	2829	6	-118	-64	-71	-43	multi-exon	FALSE	canonical	1	9976	junction_2	750454.7415845942	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	203	940	40.0	3323	False	ATTAAA	-22
PB.11275.7	chr8	-	3281	7	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	4857	junction_6	807812.2697386649	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	428	1165	10.0	-1	True	AATAAA	-13
PB.2524.10	chr12	+	2631	15	novel_in_catalog	CCDC91	novel	518	6	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	3413	junction_3	115865.82828541513	NA	4	1	TRUE	NA	NA	NA	C	coding	441	1326	315	1640	10.0	13	True	AATAAA	-16
PB.2524.11	chr12	+	2047	1	novel_in_catalog	CCDC91	novel	549	6	NA	NA	25022	-4500	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	249	750	517	1266	80.0	NA	False	NA	NA
PB.11275.2	chr8	-	2916	6	full-splice_match	YWHAZ	ENST00000395953.6	994	6	86	-2008	-59	0	multi-exon	FALSE	canonical	1	9976	junction_2	809995.1709373582	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	65	802	15.0	3	True	AATAAA	-11
PB.851.14	chr1	+	2467	14	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	184	junction_1	321714.3848216299	NA	3	NA	TRUE	NA	NA	NA	C	coding	592	1779	10	1788	20.0	2	True	ATTAAA	-17
PB.11827.10	chr9	+	1573	6	incomplete-splice_match	SET	ENST00000372686.5	1029	8	1866	-637	-496	637	5prime_fragment	FALSE	canonical	1	178448	junction_2	445798.13485415117	NA	1	NA	TRUE	NA	NA	NA	C	coding	53	162	545	706	20.0	-2905	False	AATAAA	-17
PB.851.12	chr1	+	2284	17	full-splice_match	NCSTN	ENST00000294785.9	2936	17	112	540	-2	-236	multi-exon	FALSE	canonical	1	646165	junction_4	211838.9321659615	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	14	2143	60.0	-2	True	CATAAA	-16
PB.10225.1	chr6	+	3252	15	full-splice_match	MYB	ENST00000367814.8	3302	15	48	2	-5	0	multi-exon	FALSE	canonical	1	82113	junction_1	65183.74747682469	NA	0	NA	TRUE	NA	NA	NA	A	coding	640	1923	139	2061	10.0	6	True	AATAAA	-21
PB.851.10	chr1	+	2668	16	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	-3	-4	no_combination_of_known_junctions	FALSE	canonical	1	1085	junction_7	311139.5792571702	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	15	1991	25.0	-3	True	ATTAAA	-15
PB.851.11	chr1	+	2406	14	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	7420	junction_5	328198.21895016305	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	15	1730	20.0	-3	True	ATTAAA	-14
PB.8769.3	chr4	+	4507	8	full-splice_match	SLAIN2	ENST00000264313.10	6299	8	176	1616	176	-419	multi-exon	FALSE	canonical	1	187169	junction_1	101210.85045788402	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	243	1988	25.0	-1239	False	AATAAA	-40
PB.9413.1	chr5	+	2839	7	incomplete-splice_match	SNX2	ENST00000379516.6	2128	15	35	19709	35	1688	3prime_fragment	FALSE	canonical	1	651295	junction_2	88146.79806247455	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	74	799	100.0	-51	True	NA	NA
PB.9413.2	chr5	+	1949	16	novel_not_in_catalog	SNX2	novel	2128	15	NA	NA	-24	-3	any annotated donor/acceptor	FALSE	canonical	1	11490	junction_11	293550.81359098444	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	50	1492	55.0	-27	True	AATAAA	-16
PB.9413.3	chr5	+	2334	15	full-splice_match	SNX2	ENST00000379516.6	2128	15	82	-288	-1	288	multi-exon	FALSE	canonical	1	651295	junction_2	186963.10787900243	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	27	1586	55.0	-4	True	NA	NA
PB.9413.4	chr5	+	1691	15	full-splice_match	SNX2	ENST00000379516.6	2128	15	84	353	1	0	multi-exon	FALSE	canonical	1	651295	junction_2	186963.10787900243	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	25	1584	30.0	-2	True	AATAAA	-18
PB.9413.5	chr5	+	3131	14	novel_in_catalog	SNX2	novel	2128	15	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	651295	junction_2	193218.76469407757	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	24	1055	30.0	-1	True	AATAAA	-15
PB.9413.6	chr5	+	2944	15	full-splice_match	SNX2	ENST00000379516.6	2128	15	85	-901	-1	901	multi-exon	FALSE	canonical	1	651295	junction_2	186963.10787900243	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	24	1583	100.0	-1	True	NA	NA
PB.9413.7	chr5	+	2040	15	full-splice_match	SNX2	ENST00000379516.6	2128	15	85	3	-1	-3	multi-exon	FALSE	canonical	1	651295	junction_2	186963.10787900243	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	24	1583	55.0	-1	True	AATAAA	-16
PB.7342.4	chr20	-	3657	14	full-splice_match	STAU1	ENST00000371856.6	3684	14	25	2	25	0	multi-exon	FALSE	canonical	1	70219	junction_12	315854.32264583494	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	387	2120	15.0	-9	True	AATAAA	-13
PB.9413.9	chr5	+	2317	15	full-splice_match	SNX2	ENST00000514949.1	2119	15	152	-350	152	-3	multi-exon	FALSE	canonical	1	9272	junction_1	304267.7361940601	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	652	1860	55.0	-7	True	AATAAA	-16
PB.8769.8	chr4	+	2410	8	full-splice_match	SLAIN2	ENST00000264313.10	6299	8	207	3682	207	2041	multi-exon	FALSE	canonical	1	187169	junction_1	101210.85045788402	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	212	1957	35.0	-26	True	AATAAA	-21
PB.7068.4	chr2	-	3847	12	novel_in_catalog	NCL	novel	4034	14	NA	NA	98	159	intron_retention	FALSE	canonical	1	4769916	junction_10	1350173.1222358975	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	144	1316	30.0	-13	True	ATTAAA	-19
PB.7068.5	chr2	-	3330	13	novel_in_catalog	NCL	novel	4034	14	NA	NA	97	159	intron_retention	FALSE	canonical	1	4769916	junction_11	1349889.297233748	NA	3	NA	TRUE	NA	NA	NA	C	coding	390	1173	145	1317	30.0	-14	True	ATTAAA	-19
PB.7068.6	chr2	-	3236	13	novel_in_catalog	NCL	novel	4034	14	NA	NA	98	159	intron_retention	FALSE	canonical	1	4460275	junction_6	1436115.7024710788	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	144	1670	30.0	-13	True	ATTAAA	-19
PB.7068.7	chr2	-	2621	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	102	159	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	2173209.132197983	NA	21	1	TRUE	NA	NA	NA	C	coding	679	2040	140	2179	30.0	-9	True	ATTAAA	-19
PB.7068.2	chr2	-	2658	14	full-splice_match	NCL	ENST00000322723.8	4034	14	99	1277	99	100	multi-exon	FALSE	canonical	1	4460275	junction_7	1417435.3388719882	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	143	2275	15.0	-12	True	AAGAAA	-16
PB.7068.3	chr2	-	2814	15	novel_in_catalog	NCL	novel	4034	14	NA	NA	81	166	combination_of_known_junctions	FALSE	canonical	1	32520	junction_6	2634996.545658121	NA	1	NA	TRUE	NA	NA	NA	C	coding	734	2205	161	2365	25.0	-30	False	ATTAAA	-26
PB.9227.3	chr5	+	3325	3	full-splice_match	GPX8	ENST00000515370.1	1036	3	0	-2289	0	-28	multi-exon	FALSE	canonical	1	27494	junction_1	222912.0	NA	1	1	TRUE	NA	NA	NA	C	coding	158	477	24	500	80.0	-10	True	NA	NA
PB.9227.2	chr5	+	3731	3	full-splice_match	GPX8	ENST00000503787.5	1411	3	50	-2370	0	223	multi-exon	FALSE	canonical	1	468951	junction_1	2183.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	26	655	30.0	-12	True	AATAAA	-15
PB.9227.1	chr5	+	3487	3	full-splice_match	GPX8	ENST00000503787.5	1411	3	43	-2119	-6	-28	multi-exon	FALSE	canonical	1	468951	junction_1	2183.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	33	662	80.0	-19	False	NA	NA
PB.1219.45	chr1	-	2640	5	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-6	2483	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	84751.75327795585	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	NA	NA
PB.1219.44	chr1	-	2758	5	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-4	2483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	84751.75327795585	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	NA	NA
PB.1219.47	chr1	-	4554	3	incomplete-splice_match	LYST	ENST00000465349.5	5220	12	91	34751	67	2481	3prime_fragment	FALSE	canonical	1	9706	junction_2	99727.0	NA	10	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	NA	NA
PB.1219.46	chr1	-	3102	4	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-14	2482	any annotated donor/acceptor	FALSE	canonical	1	52673	junction_1	66414.71969877361	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-10	True	NA	NA
PB.1219.41	chr1	-	3422	4	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	14	2482	any annotated donor/acceptor	FALSE	canonical	1	9706	junction_3	85710.26281996029	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	209	False	NA	NA
PB.1219.40	chr1	-	3191	5	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-67	2481	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83939.26351051396	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	5	True	NA	NA
PB.1219.43	chr1	-	2815	5	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	165	2481	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83939.26351051396	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	360	False	NA	NA
PB.1219.42	chr1	-	3185	5	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-42	2483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	83939.26351051396	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	30	True	NA	NA
PB.11646.56	chr9	-	2735	21	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	13050	junction_2	401242.7016011631	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	93	2198	80.0	-1	True	NA	NA
PB.1219.49	chr1	-	3820	4	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-3	2480	intron_retention	FALSE	non_canonical	0	0	junction_1	90695.99147824684	NA	14	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	NA	NA
PB.1219.48	chr1	-	4236	4	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-47	2480	intron_retention	FALSE	non_canonical	0	0	junction_1	96392.72111293236	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	25	True	NA	NA
PB.4828.1	chr17	-	5826	27	full-splice_match	ULK2	ENST00000395544.8	6010	27	-19	203	0	-203	multi-exon	TRUE	canonical	1	53563	junction_26	30429.08324119227	NA	1	NA	TRUE	NA	NA	NA	C	coding	1036	3111	520	3630	35.0	-1	True	AATAAA	-22
PB.4828.3	chr17	-	3714	27	full-splice_match	ULK2	ENST00000395544.8	6010	27	34	2262	34	-2262	multi-exon	FALSE	canonical	1	53563	junction_26	30429.08324119227	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	467	3577	70.0	52	False	NA	NA
PB.4828.2	chr17	-	4868	27	full-splice_match	ULK2	ENST00000395544.8	6010	27	-17	1159	2	-1159	multi-exon	FALSE	canonical	1	53563	junction_26	30429.08324119227	NA	16	NA	TRUE	NA	NA	NA	C	coding	1036	3111	518	3628	25.0	1	True	AATAAA	-15
PB.8194.5	chr3	-	3602	21	novel_not_in_catalog	DENND6A	novel	4655	20	NA	NA	5	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	55358.91185570305	NA	2	NA	TRUE	NA	NA	NA	B	coding	608	1827	67	1893	20.0	-8	True	ATTAAA	-18
PB.8194.4	chr3	-	3625	22	novel_not_in_catalog	DENND6A	novel	4655	20	NA	NA	12	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	62274.32792661851	NA	9	1	TRUE	NA	NA	NA	B	coding	381	1146	647	1792	20.0	-1	True	ATTAAA	-19
PB.10766.10	chr7	-	885	4	full-splice_match	LHFPL3-AS1	ENST00000411448.5	856	4	-23	-6	-2	6	multi-exon	FALSE	canonical	1	4885	junction_1	15824.706084685005	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-11	True	AATAAA	-24
PB.11269.2	chr8	+	2702	2	incomplete-splice_match	POLR2K	ENST00000353107.7	998	4	81	-1	40	1	intron_retention	FALSE	canonical	1	1639275	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	29	True	NA	NA
PB.11269.1	chr8	+	3377	1	genic	POLR2K	novel	NA	NA	NA	NA	2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-9	True	NA	NA
PB.9581.10	chr5	+	2878	3	novel_in_catalog	MFAP3	novel	643	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	4587	junction_1	85891.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	471	1559	15.0	-15	False	AATAAA	-14
PB.10740.1	chr7	+	3549	3	full-splice_match	TRIM56	ENST00000306085.10	10952	3	42	7361	-41	-18	multi-exon	FALSE	canonical	1	157655	junction_1	15662.0	NA	18	NA	TRUE	NA	NA	NA	C	coding	755	2268	256	2523	100.0	0	True	NA	NA
PB.7164.27	chr20	-	3394	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	20	698	any annotated donor/acceptor	FALSE	canonical	1	1199	junction_20	114559.43700634183	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	358	2376	25.0	-11	True	AATAAA	-15
PB.9581.11	chr5	+	5216	3	novel_in_catalog	MFAP3	novel	643	3	NA	NA	0	2337	combination_of_known_junctions	FALSE	canonical	1	4587	junction_1	85891.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	471	1559	25.0	-15	False	AATAAA	-13
PB.8775.1	chr4	+	4389	13	full-splice_match	SPATA18	ENST00000295213.8	4396	13	10	-3	10	3	multi-exon	FALSE	canonical	1	12133	junction_4	11252.712905919869	NA	3	NA	TRUE	NA	NA	NA	A	coding	538	1617	365	1981	25.0	37	True	AATAAA	-20
PB.11618.1	chr9	-	2171	17	novel_not_in_catalog	RASEF	novel	5576	17	NA	NA	36586	-2824	any annotated donor/acceptor	TRUE	canonical	1	506	junction_16	16413.510808553423	NA	0	NA	TRUE	NA	NA	NA	B	coding	557	1674	230	1903	85.0	NA	False	TTTAAA	-6
PB.526.2	chr1	-	3959	11	novel_not_in_catalog	GBP5	novel	4112	4	NA	NA	-83	-11	any annotated donor/acceptor	FALSE	canonical	1	44885	junction_10	190700.8038745773	NA	1	NA	TRUE	NA	NA	NA	B	coding	586	1761	456	2216	45.0	-1	True	TATAAA	-43
PB.526.1	chr1	-	4079	12	novel_not_in_catalog	GBP5	novel	4112	4	NA	NA	-87	-3	any annotated donor/acceptor	FALSE	canonical	1	73647	junction_11	189355.65575453878	NA	1	NA	TRUE	NA	NA	NA	B	coding	586	1761	568	2328	20.0	-5	True	CATAAA	-20
PB.8397.45	chr3	+	4826	27	full-splice_match	ATP2C1	ENST00000428331.6	4795	27	-74	43	13	0	multi-exon	FALSE	canonical	1	304847	junction_1	201649.93089133644	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	310	3069	35.0	-125	False	AATAAA	-16
PB.1157.15	chr1	-	1945	13	incomplete-splice_match	ENAH	ENST00000366843.6	2758	14	40	1307	40	-758	3prime_fragment	FALSE	canonical	1	133069	junction_8	214655.86116709904	NA	2	NA	TRUE	NA	NA	NA	C	coding	530	1590	355	1944	65.0	328	False	NA	NA
PB.1157.12	chr1	-	4146	14	novel_not_in_catalog	ENAH	novel	13168	15	NA	NA	681	-1	any annotated donor/acceptor	FALSE	canonical	1	831	junction_13	238243.23489094453	NA	2	NA	TRUE	NA	NA	NA	C	coding	557	1674	179	1852	90.0	-1	True	NA	NA
PB.11450.3	chr9	+	2665	8	novel_not_in_catalog	IL33	novel	2327	5	NA	NA	21	-1	any annotated donor/acceptor	TRUE	canonical	1	8131	junction_4	36007.02151140037	NA	2	NA	TRUE	NA	NA	NA	B	coding	264	795	58	852	35.0	0	True	AATAAA	-17
PB.11108.6	chr8	+	3749	9	novel_in_catalog	AP3M2	novel	3669	10	NA	NA	22	-835	intron_retention	FALSE	canonical	1	4697	junction_2	68290.4919846094	NA	1	NA	TRUE	NA	NA	NA	C	coding	303	912	1552	2463	30.0	-12	True	AAAACA	-38
PB.11929.16	chr9	-	3349	9	novel_in_catalog	DPH7	novel	1311	2	NA	NA	5	-1	intron_retention	FALSE	canonical	1	48414	junction_6	97416.99402111203	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	2190	3020	50.0	-4	True	ATTAAA	-12
PB.1635.6	chr10	-	1865	4	novel_not_in_catalog	CALHM2	novel	1843	4	NA	NA	-9	-3	any annotated donor/acceptor	FALSE	canonical	1	13795	junction_3	57173.98623111349	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	534	1505	25.0	-4	True	GATAAA	-14
PB.11929.14	chr9	-	1836	9	full-splice_match	DPH7	ENST00000277540.6	1847	9	11	0	11	0	multi-exon	FALSE	canonical	1	90741	junction_6	92969.14329362189	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	148	1506	55.0	-25	True	ATTAAA	-13
PB.11929.15	chr9	-	1749	8	novel_in_catalog	DPH7	novel	1311	2	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	39828	junction_2	90128.26738983656	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	127	1419	55.0	-4	True	ATTAAA	-13
PB.11929.12	chr9	-	2119	11	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	6250	junction_7	111887.3188973621	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	959	1789	55.0	-25	True	ATTAAA	-13
PB.11929.13	chr9	-	1931	10	novel_in_catalog	DPH7	novel	1311	2	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	69887	junction_8	95792.16888428591	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	771	1601	55.0	-26	True	ATTAAA	-13
PB.8100.5	chr3	+	1236	5	incomplete-splice_match	P4HTM	ENST00000472301.5	2796	8	334	2521	-20	-1	3prime_fragment	FALSE	canonical	1	370463	junction_4	12879.369576477724	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	16	906	15.0	1	True	AATAAA	-23
PB.1635.7	chr10	-	2559	4	novel_in_catalog	CALHM2	novel	1843	4	NA	NA	-22	-4	combination_of_known_junctions	FALSE	canonical	1	29832	junction_2	33350.129048559254	NA	2	1	TRUE	NA	NA	NA	C	coding	323	972	1229	2200	30.0	-17	True	GATAAA	-13
PB.9645.3	chr5	+	4042	14	novel_in_catalog	RGS14	novel	2415	15	NA	NA	38	0	intron_retention	FALSE	canonical	1	65610	junction_1	88369.98918666942	NA	0	NA	TRUE	NA	NA	NA	B	coding	354	1065	151	1215	10.0	-49	True	NA	NA
PB.8397.44	chr3	+	3507	27	full-splice_match	ATP2C1	ENST00000428331.6	4795	27	-87	1375	0	433	multi-exon	FALSE	canonical	1	304847	junction_1	201649.93089133644	NA	1	NA	TRUE	NA	NA	NA	C	coding	919	2760	323	3082	25.0	-138	False	AATACA	-26
PB.727.11	chr1	-	2301	2	full-splice_match	MCL1	ENST00000307940.3	1110	2	-80	-1111	-20	968	multi-exon	FALSE	canonical	1	106847	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	411	896	25.0	-1	True	AATAAA	-29
PB.11929.18	chr9	-	2147	11	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	11	-1	any annotated donor/acceptor	FALSE	canonical	1	2331	junction_7	112484.84195663876	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	988	1818	50.0	-25	True	ATTAAA	-12
PB.806.1	chr1	+	2403	14	novel_in_catalog	MSTO1	novel	983	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	855	junction_2	128085.78923047203	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	62	1741	35.0	-2433	False	NA	NA
PB.1635.5	chr10	-	1846	4	full-splice_match	CALHM2	ENST00000260743.9	1859	4	8	5	8	-5	multi-exon	FALSE	canonical	1	39584	junction_3	45779.63160135253	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	517	1488	30.0	-1	True	GATAAA	-12
PB.10131.1	chr6	-	3306	15	full-splice_match	PREP	ENST00000369110.7	2905	15	-14	-387	-14	387	multi-exon	FALSE	canonical	1	193630	junction_14	90166.57281424377	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	208	2340	80.0	-17	True	AATAGA	-23
PB.10131.2	chr6	-	2734	15	full-splice_match	PREP	ENST00000369110.7	2905	15	16	155	16	-155	multi-exon	FALSE	canonical	1	193630	junction_14	90166.57281424377	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	178	2310	15.0	13	True	AATAAA	-16
PB.10131.3	chr6	-	2569	14	novel_in_catalog	PREP	novel	2905	15	NA	NA	-18	-162	no_combination_of_known_junctions	FALSE	canonical	1	8864	junction_7	123362.20002940396	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	212	2152	35.0	-21	True	AATAAA	-9
PB.10131.4	chr6	-	2708	15	full-splice_match	PREP	ENST00000369110.7	2905	15	2	195	2	-195	multi-exon	FALSE	canonical	1	193630	junction_14	90166.57281424377	NA	1	1	TRUE	NA	NA	NA	C	coding	710	2133	192	2324	40.0	-1	True	AATAAA	-23
PB.3218.9	chr13	-	4505	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-13	572	0	-572	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	428	1987	30.0	-1	True	NA	NA
PB.10131.6	chr6	-	2380	11	novel_in_catalog	PREP	novel	2905	15	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	68765	junction_1	126510.30593813295	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	208	1557	10.0	-17	True	AATAAA	-27
PB.11108.8	chr8	+	6476	8	novel_in_catalog	AP3M2	novel	3669	10	NA	NA	-13	0	intron_retention	FALSE	canonical	1	77525	junction_1	42826.0734356813	NA	9	1	TRUE	NA	NA	NA	C	coding	335	1008	3347	4354	15.0	-2	True	AATAAA	-18
PB.8100.2	chr3	+	1775	9	full-splice_match	P4HTM	ENST00000383729.8	2127	9	338	14	-38	-14	multi-exon	FALSE	canonical	1	303953	junction_6	70479.35346067227	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	34	1542	25.0	-17	True	AATAAA	-42
PB.4935.1	chr17	+	5641	8	novel_in_catalog	SOCS7	novel	1827	9	NA	NA	78	-1625	combination_of_known_junctions	FALSE	canonical	1	73321	junction_2	22440.033765298907	NA	6	NA	TRUE	NA	NA	NA	A	coding	262	789	367	1155	90.0	577	False	AGTAAA	-13
PB.1635.1	chr10	-	2569	4	novel_not_in_catalog	CALHM2	novel	1843	4	NA	NA	-5	1	any annotated donor/acceptor	FALSE	canonical	1	13795	junction_3	40786.14369556842	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	1231	2202	10.0	0	True	GATAAA	-21
PB.9002.26	chr4	-	4163	15	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	-184	-40453	any annotated donor/acceptor	FALSE	canonical	1	636	junction_9	58551.44941896165	NA	2	NA	TRUE	NA	NA	NA	B	coding	338	1017	803	1819	20.0	-20	True	ATTAAA	-12
PB.11527.1	chr9	+	1447	9	full-splice_match	CREB3	ENST00000353704.2	1832	9	239	146	-24	-2	multi-exon	FALSE	canonical	1	623156	junction_4	81023.14557726313	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	200	1315	15.0	1	True	NA	NA
PB.179.6	chr1	-	2516	7	novel_in_catalog	RUNX3	novel	4340	6	NA	NA	-47	-24	combination_of_known_junctions	FALSE	canonical	1	2427	junction_6	140021.6749467342	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	158	1447	95.0	0	True	NA	NA
PB.12303.31	chrX	-	2135	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	-21	4904	no_combination_of_known_junctions	FALSE	canonical	1	9761	junction_4	347051.607874044	NA	3	NA	TRUE	NA	NA	NA	C	coding	483	1452	165	1616	70.0	4	True	NA	NA
PB.8100.3	chr3	+	2496	8	full-splice_match	P4HTM	ENST00000472301.5	2796	8	331	-31	-23	-8	multi-exon	FALSE	canonical	1	341102	junction_5	63944.817334310734	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	19	1290	35.0	-2	True	NA	NA
PB.3349.1	chr14	-	606	4	full-splice_match	NEDD8	ENST00000250495.9	708	4	89	13	-10	1	multi-exon	FALSE	canonical	1	1548389	junction_3	811933.244800745	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	1	True	AATAAA	-14
PB.3918.8	chr15	+	6292	15	full-splice_match	SNX1	ENST00000559844.5	1971	15	0	-4321	0	-981	multi-exon	FALSE	canonical	1	592656	junction_1	144061.900476578	NA	4	NA	TRUE	NA	NA	NA	C	coding	522	1569	15	1583	55.0	-2	True	NA	NA
PB.4929.8	chr17	-	1988	15	full-splice_match	DDX52	ENST00000617633.4	6362	15	18	4356	0	-379	multi-exon	FALSE	canonical	1	228023	junction_14	45027.76992743206	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	27	1826	20.0	-7	True	GATAAA	-21
PB.12303.30	chrX	-	2169	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	4910	no_combination_of_known_junctions	FALSE	canonical	1	19218	junction_6	369597.79046290467	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	625	1644	70.0	-1	True	NA	NA
PB.3918.4	chr15	+	8210	15	full-splice_match	SNX1	ENST00000559844.5	1971	15	-18	-6221	-9	-4	multi-exon	FALSE	canonical	1	592656	junction_1	144061.900476578	NA	5	NA	TRUE	NA	NA	NA	C	coding	522	1569	33	1601	40.0	-20	True	AATAAA	-18
PB.3918.5	chr15	+	2614	14	incomplete-splice_match	SNX1	ENST00000559844.5	1971	15	-7	-1	0	1	intron_retention	FALSE	canonical	1	592656	junction_1	141581.57566601317	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	22	1659	30.0	-9	True	AATAAA	-18
PB.3918.6	chr15	+	3374	15	full-splice_match	SNX1	ENST00000261889.9	3373	15	4	-5	-3	5	multi-exon	FALSE	canonical	1	35392	junction_14	249427.55230895552	NA	3	NA	TRUE	NA	NA	NA	C	coding	557	1674	18	1691	10.0	-5	True	NA	NA
PB.3918.7	chr15	+	1778	13	full-splice_match	SNX1	ENST00000561026.5	1374	13	-16	-388	-2	0	multi-exon	FALSE	canonical	1	18672	junction_2	273006.19569154875	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	17	1390	30.0	-4	True	AATAAA	-17
PB.4929.1	chr17	-	4903	16	novel_not_in_catalog	DDX52	novel	2951	6	NA	NA	1	-668	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	88884.79333074296	NA	2	1	TRUE	NA	NA	NA	C	coding	599	1800	25	1824	80.0	-5	True	NA	NA
PB.3918.1	chr15	+	2038	15	novel_in_catalog	SNX1	novel	1869	14	NA	NA	-23	4	combination_of_known_junctions	FALSE	canonical	1	9020	junction_1	256034.61596716582	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	552	1646	25.0	-1902	False	AATAAA	-21
PB.3918.2	chr15	+	2044	15	novel_in_catalog	SNX1	novel	1869	14	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	1	6478	junction_8	330530.46545623336	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	1153	1665	40.0	-1878	False	AATAAA	-8
PB.3918.3	chr15	+	1973	15	full-splice_match	SNX1	ENST00000559844.5	1971	15	-3	1	-3	-1	multi-exon	FALSE	canonical	1	592656	junction_1	144061.900476578	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	18	1586	30.0	-5	True	AATAAA	-16
PB.10558.1	chr7	-	804	4	full-splice_match	CHCHD2	ENST00000395422.3	901	4	94	3	-51	-3	multi-exon	FALSE	canonical	1	250112	junction_1	1115758.6616451705	NA	1	NA	TRUE	NA	NA	NA	A	coding	140	423	103	525	20.0	-7	True	AATAAA	-17
PB.9046.1	chr4	+	3860	12	incomplete-splice_match	FNIP2	ENST00000264433.10	6925	17	64471	2355	1529	-2355	5prime_fragment	FALSE	canonical	1	87815	junction_1	21151.62632162328	NA	0	NA	TRUE	NA	NA	NA	A	coding	889	2670	41	2710	90.0	-8204	False	TATAAA	-32
PB.4263.1	chr16	+	4447	30	novel_in_catalog	NOMO1	novel	4355	31	NA	NA	49	0	intron_retention	TRUE	canonical	1	761	junction_3	333834.3036344472	NA	3	NA	TRUE	NA	NA	NA	C	coding	839	2520	123	2642	25.0	NA	False	AATAAA	-28
PB.4263.2	chr16	+	4025	32	novel_in_catalog	NOMO1	novel	4355	31	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	1	761	junction_3	324470.79820094304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1222	3669	122	3790	25.0	NA	False	AATAAA	-30
PB.4263.3	chr16	+	4549	32	novel_not_in_catalog	NOMO1	novel	4355	31	NA	NA	-41	0	intron_retention	TRUE	canonical	1	14	junction_7	324604.8155849905	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	910	4038	25.0	NA	False	AATAAA	-28
PB.4263.4	chr16	+	4074	31	full-splice_match	NOMO1	ENST00000287667.11	4355	31	277	4	140	0	multi-exon	FALSE	canonical	1	761	junction_3	328236.0051382135	NA	8	1	TRUE	NA	NA	NA	C	coding	1144	3435	129	3563	25.0	NA	False	AATAAA	-28
PB.4263.5	chr16	+	5184	32	novel_not_in_catalog	NOMO1	novel	4355	31	NA	NA	-21	6016	intron_retention	FALSE	canonical	1	761	junction_3	324552.914433287	NA	1	NA	TRUE	NA	NA	NA	C	coding	1222	3669	94	3762	20.0	NA	False	NA	NA
PB.4263.6	chr16	+	4379	28	incomplete-splice_match	NOMO1	ENST00000620755.4	3921	32	-3	8314	-3	-8303	3prime_fragment	FALSE	canonical	1	761	junction_3	271971.77054477914	NA	1	NA	TRUE	NA	NA	NA	C	coding	1121	3366	76	3441	15.0	NA	False	AATACA	-29
PB.4263.7	chr16	+	5032	30	novel_not_in_catalog	NOMO1	novel	4355	31	NA	NA	12	-4705	any annotated donor/acceptor	FALSE	canonical	1	11	junction_29	327667.3953201995	NA	0	NA	TRUE	NA	NA	NA	C	coding	1175	3528	61	3588	20.0	NA	False	NA	NA
PB.4263.8	chr16	+	3704	22	novel_in_catalog	NOMO1	novel	4355	31	NA	NA	17	16521	intron_retention	FALSE	canonical	1	761	junction_3	229049.2616767849	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2520	56	2575	70.0	NA	False	NA	NA
PB.1808.5	chr11	-	3697	6	full-splice_match	TMEM41B	ENST00000527813.5	803	6	-5	-2889	1	-1	multi-exon	FALSE	canonical	1	3263	junction_1	82607.71155866745	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	195	785	30.0	-43	True	AATAAA	-17
PB.1808.6	chr11	-	3281	7	full-splice_match	TMEM41B	ENST00000528080.5	3968	7	128	559	-16	-559	multi-exon	FALSE	canonical	1	147679	junction_6	39630.416969026315	NA	3	NA	TRUE	NA	NA	NA	C	coding	291	876	212	1087	50.0	864	False	ATTAAA	-40
PB.1808.7	chr11	-	3959	6	novel_in_catalog	TMEM41B	novel	1443	8	NA	NA	0	-494	intron_retention	FALSE	canonical	1	147679	junction_5	43317.01697300958	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	1266	1700	30.0	-38	True	AATAAA	-23
PB.1808.1	chr11	-	1476	8	full-splice_match	TMEM41B	ENST00000611268.4	1440	8	-36	0	27	0	multi-exon	FALSE	canonical	1	40623	junction_1	72326.45668644583	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	163	1038	30.0	-11	True	AATAAA	-18
PB.1808.2	chr11	-	3801	7	full-splice_match	TMEM41B	ENST00000528080.5	3968	7	181	-14	31	0	multi-exon	FALSE	canonical	1	147679	junction_6	39630.416969026315	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	159	1034	30.0	-7	True	AATAAA	-18
PB.9924.19	chr6	-	3228	7	full-splice_match	TAPBP	ENST00000489157.5	1299	7	134	-2063	-71	-3	multi-exon	FALSE	canonical	1	14787	junction_5	357165.97135058313	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	80	1165	30.0	8838	False	AATAAA	-20
PB.9924.18	chr6	-	3350	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-32	-3	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	337687.29984030715	NA	4	1	TRUE	NA	NA	NA	C	coding	448	1347	246	1592	30.0	8672	False	AATAAA	-20
PB.4311.10	chr16	-	3140	10	full-splice_match	EARS2	ENST00000563459.5	3840	10	-5	705	0	-98	multi-exon	FALSE	canonical	1	42688	junction_1	75804.92906935456	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	13	1584	15.0	-6	True	NA	NA
PB.4311.11	chr16	-	3015	10	novel_in_catalog	EARS2	novel	3961	9	NA	NA	2	10	intron_retention	FALSE	canonical	1	4459	junction_9	97600.69690792983	NA	2	NA	TRUE	NA	NA	NA	C	coding	430	1293	379	1671	5.0	-13	True	NA	NA
PB.4311.12	chr16	-	2858	10	full-splice_match	EARS2	ENST00000563459.5	3840	10	-30	1012	-5	8	multi-exon	FALSE	canonical	1	42688	junction_1	75804.92906935456	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	38	1609	5.0	-31	False	NA	NA
PB.4311.13	chr16	-	2917	9	full-splice_match	EARS2	ENST00000449606.5	3961	9	16	1028	-4	5	multi-exon	FALSE	canonical	1	96880	junction_8	60524.46653923829	NA	2	NA	TRUE	NA	NA	NA	C	coding	523	1572	17	1588	15.0	-10	True	NA	NA
PB.9924.13	chr6	-	3732	8	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-4	-4	any annotated donor/acceptor	FALSE	canonical	1	6786	junction_6	358476.9301426381	NA	2	NA	TRUE	NA	NA	NA	C	coding	356	1071	600	1670	25.0	-5	True	AATAAA	-19
PB.9924.11	chr6	-	3419	7	novel_in_catalog	TAPBP	novel	3759	8	NA	NA	-36	-3	no_combination_of_known_junctions	FALSE	canonical	1	19584	junction_1	382692.15332928573	NA	3	1	TRUE	NA	NA	NA	C	coding	459	1380	45	1424	30.0	-17	True	AATAAA	-20
PB.9924.10	chr6	-	3796	7	novel_in_catalog	TAPBP	novel	3759	8	NA	NA	-28	-3	combination_of_known_junctions	FALSE	canonical	1	785673	junction_2	116131.46099631612	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	37	936	30.0	-9	True	AATAAA	-20
PB.9924.16	chr6	-	3501	6	novel_in_catalog	TAPBP	novel	3759	8	NA	NA	-3	-3	no_combination_of_known_junctions	FALSE	canonical	1	22398	junction_1	414728.7441947567	NA	3	NA	TRUE	NA	NA	NA	C	coding	429	1290	217	1506	30.0	-4	True	AATAAA	-20
PB.9924.15	chr6	-	3407	8	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-36	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	360667.7714705751	NA	17	NA	TRUE	NA	NA	NA	C	coding	401	1206	139	1344	30.0	-17	True	AATAAA	-20
PB.9924.14	chr6	-	3508	9	full-splice_match	TAPBP	ENST00000475304.5	1686	9	166	-1988	-36	-3	multi-exon	FALSE	canonical	0	0	junction_5	406530.9630181937	NA	5	1	TRUE	NA	NA	NA	C	coding	466	1401	45	1445	30.0	-17	True	AATAAA	-20
PB.8767.4	chr4	-	3668	22	novel_in_catalog	NFXL1	novel	3723	23	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	6765	junction_4	41622.27543906776	NA	1	NA	TRUE	NA	NA	NA	C	coding	772	2319	83	2401	45.0	-20	False	ATTAAA	-13
PB.8767.7	chr4	-	3634	23	novel_not_in_catalog	NFXL1	novel	3723	23	NA	NA	-14	-217	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	37985.50572333941	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	196	2931	40.0	-8	True	AATAAA	-21
PB.8767.6	chr4	-	3502	23	full-splice_match	NFXL1	ENST00000381538.7	3728	23	18	208	18	-205	multi-exon	FALSE	canonical	1	36109	junction_22	33394.686229112995	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	52	2787	30.0	11	True	AATAAA	-33
PB.8767.3	chr4	-	3692	23	full-splice_match	NFXL1	ENST00000381538.7	3728	23	33	3	33	0	multi-exon	FALSE	canonical	1	36109	junction_22	33394.686229112995	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	37	2772	45.0	-1	True	ATTAAA	-13
PB.8767.2	chr4	-	3906	23	full-splice_match	NFXL1	ENST00000507489.1	3833	23	-73	0	4	0	multi-exon	FALSE	canonical	1	5695	junction_22	37198.1264905509	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	251	2986	45.0	-3	True	ATTAAA	-13
PB.5366.1	chr18	-	6085	20	novel_in_catalog	LPIN2	novel	6229	20	NA	NA	135	-8	combination_of_known_junctions	FALSE	canonical	1	92151	junction_19	51935.2410637957	NA	1	NA	TRUE	NA	NA	NA	B	coding	896	2691	104	2794	30.0	171	False	AATAAA	-13
PB.8767.9	chr4	-	3121	23	full-splice_match	NFXL1	ENST00000507131.5	2664	23	6	-463	6	463	multi-exon	FALSE	canonical	1	36109	junction_22	33394.686229112995	NA	2	NA	TRUE	NA	NA	NA	C	coding	911	2736	64	2799	60.0	-1	True	NA	NA
PB.8767.8	chr4	-	3381	23	full-splice_match	NFXL1	ENST00000381538.7	3728	23	-1	348	-1	-345	multi-exon	FALSE	canonical	1	36109	junction_22	33394.686229112995	NA	5	1	TRUE	NA	NA	NA	C	coding	911	2736	71	2806	40.0	-8	True	AATAAA	-40
PB.5366.5	chr18	-	3310	1	incomplete-splice_match	LPIN2	ENST00000261596.8	6229	20	91636	8	62498	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	105	318	6	323	30.0	NA	False	AATAAA	-13
PB.5366.4	chr18	-	6169	20	novel_in_catalog	LPIN2	novel	6229	20	NA	NA	28	-8	combination_of_known_junctions	TRUE	canonical	1	30545	junction_19	62070.91784478608	NA	0	NA	TRUE	NA	NA	NA	B	coding	933	2802	77	2878	30.0	1	True	AATAAA	-13
PB.4273.1	chr16	+	6503	31	full-splice_match	ABCC1	ENST00000399410.7	6552	31	40	9	40	-9	multi-exon	FALSE	canonical	1	115159	junction_1	88349.6924868257	NA	0	NA	TRUE	NA	NA	NA	A	coding	1531	4596	136	4731	25.0	-2	True	AGTAAA	-19
PB.8838.10	chr4	+	2087	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	-17	3523	-17	270	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	219	1508	10.0	-9586	False	NA	NA
PB.8284.1	chr3	-	5245	9	full-splice_match	CD47	ENST00000355354.12	5225	9	-21	1	-21	-1	multi-exon	FALSE	canonical	1	398552	junction_8	287417.56413206446	NA	3	NA	TRUE	NA	NA	NA	C	coding	305	918	139	1056	30.0	11	True	ATTAAA	-15
PB.5465.1	chr18	-	2145	6	full-splice_match	ST8SIA5	ENST00000536490.1	1499	6	0	-646	0	6	multi-exon	FALSE	canonical	1	2206	junction_5	9960.28817655393	NA	0	NA	TRUE	NA	NA	NA	A	coding	345	1038	303	1340	25.0	-1	True	AATAAA	-24
PB.11630.1	chr9	-	1935	4	full-splice_match	ISCA1	ENST00000375991.8	1958	4	-9	32	0	-32	multi-exon	FALSE	canonical	1	113	junction_1	10328.151636291084	NA	0	NA	TRUE	NA	NA	NA	C	coding	129	390	81	470	40.0	-1	True	NA	NA
PB.11630.3	chr9	-	1918	5	novel_not_in_catalog	ISCA1	novel	1958	4	NA	NA	-31	-4	any annotated donor/acceptor	FALSE	canonical	1	45	junction_1	9682.644767185255	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	112	450	30.0	-32	True	ATTAAA	-26
PB.11630.2	chr9	-	1977	4	full-splice_match	ISCA1	ENST00000311534.6	813	4	-35	-1129	-35	-4	multi-exon	FALSE	canonical	1	113	junction_1	5647.895734007686	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	394	False	ATTAAA	-26
PB.10898.20	chr7	-	3932	9	novel_in_catalog	TCAF1	novel	5733	9	NA	NA	7	597	combination_of_known_junctions	FALSE	canonical	1	1915	junction_2	112310.24465953396	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2766	133	2898	75.0	-16	False	NA	NA
PB.1853.8	chr11	+	2541	18	novel_not_in_catalog	ZDHHC13	novel	458	5	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	111	junction_2	67287.61747221033	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	610	2088	15.0	-21	True	AATAAA	-14
PB.1853.9	chr11	+	2181	17	full-splice_match	ZDHHC13	ENST00000446113.6	2445	17	21	243	5	-243	multi-exon	FALSE	canonical	1	84388	junction_1	42299.637226392086	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	101	1969	60.0	-18	True	GATAAA	-16
PB.11488.8	chr9	-	2102	6	full-splice_match	CAAP1	ENST00000333916.7	2791	6	16	673	-1	378	multi-exon	FALSE	canonical	1	124126	junction_5	73149.42314851157	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	74	1159	20.0	13	True	AATAAA	-17
PB.11488.9	chr9	-	2105	6	full-splice_match	CAAP1	ENST00000625311.1	1532	6	-315	-258	30	258	multi-exon	FALSE	canonical	1	30142	junction_5	106107.84774181408	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	632	1282	30.0	-18	True	AATAAA	-16
PB.9172.8	chr5	-	1681	5	full-splice_match	AMACR	ENST00000335606.10	4153	5	-1	2473	-1	33	multi-exon	FALSE	canonical	1	258555	junction_4	125744.38214588356	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	91	1239	5.0	-28	True	GATAAA	-33
PB.7287.2	chr20	-	2012	6	novel_in_catalog	SNHG17	novel	517	4	NA	NA	-28	2	intron_retention	FALSE	canonical	1	108205	junction_2	211180.69875630207	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-54	True	AATAAA	-17
PB.9172.6	chr5	-	2324	6	full-splice_match	AMACR	ENST00000382085.7	1195	6	-22	-1107	-19	-26	multi-exon	FALSE	canonical	1	32410	junction_1	198534.0899043789	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	32	1216	80.0	-2	True	NA	NA
PB.1853.1	chr11	+	2352	17	novel_in_catalog	ZDHHC13	novel	458	5	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	1	630	junction_1	55993.72133552118	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	419	1897	15.0	-117	False	AATAAA	-16
PB.1853.2	chr11	+	3814	9	incomplete-splice_match	ZDHHC13	ENST00000446113.6	2445	17	-18	17818	12	2666	3prime_fragment	FALSE	canonical	1	84388	junction_1	34767.84997307139	NA	6	NA	TRUE	NA	NA	NA	C	coding	339	1020	140	1159	80.0	-92	False	TATAAA	-35
PB.1853.3	chr11	+	2488	17	novel_not_in_catalog	ZDHHC13	novel	458	5	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	3008	junction_15	56228.715754517674	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	125	2035	15.0	-42	True	AATAAA	-14
PB.1853.4	chr11	+	2280	16	full-splice_match	ZDHHC13	ENST00000399351.7	2283	16	2	1	2	-1	multi-exon	FALSE	canonical	1	16268	junction_1	54131.183992798666	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	348	1826	20.0	-21	True	AATAAA	-15
PB.1853.5	chr11	+	2396	17	novel_not_in_catalog	ZDHHC13	novel	458	5	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	3930	junction_14	59019.55284555995	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	109	1647	15.0	-26	True	AATAAA	-14
PB.1853.6	chr11	+	2625	19	novel_not_in_catalog	ZDHHC13	novel	458	5	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	153	junction_2	74766.90289150443	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	693	2171	20.0	-24	True	AATAAA	-15
PB.1853.7	chr11	+	2161	15	novel_in_catalog	ZDHHC13	novel	458	5	NA	NA	-1	3	no_combination_of_known_junctions	FALSE	canonical	1	2538	junction_6	70050.10651483547	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	351	1703	20.0	-24	True	AATAAA	-19
PB.9169.10	chr5	+	2650	19	novel_not_in_catalog	TARS	novel	2534	20	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	6513	junction_16	657904.3896579859	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	216	1829	80.0	0	True	AAAAAG	-43
PB.9253.6	chr5	+	2871	2	novel_not_in_catalog	PPWD1	novel	838	2	NA	NA	0	-422	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	3	True	NA	NA
PB.9253.4	chr5	+	3668	9	novel_in_catalog	PPWD1	novel	838	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	13445	junction_3	143343.78886853627	NA	2	NA	TRUE	NA	NA	NA	C	coding	323	972	2553	3524	35.0	0	True	ATTAAA	-11
PB.9253.5	chr5	+	2177	12	novel_in_catalog	PPWD1	novel	838	2	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	5489	junction_2	150632.78272904016	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	380	2032	35.0	1	True	ATTAAA	-12
PB.9253.2	chr5	+	1991	11	full-splice_match	PPWD1	ENST00000261308.9	2166	11	167	8	107	0	multi-exon	FALSE	canonical	1	217111	junction_2	91130.57050084784	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	149	1846	35.0	-3	True	ATTAAA	-12
PB.9253.3	chr5	+	4124	10	novel_in_catalog	PPWD1	novel	838	2	NA	NA	0	-1	intron_retention	FALSE	canonical	1	239391	junction_1	88096.1094651114	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	2500	3972	20.0	0	True	ATTAAA	-19
PB.9253.1	chr5	+	4085	10	novel_not_in_catalog	PPWD1	novel	838	2	NA	NA	-17	0	intron_retention	FALSE	canonical	1	1113	junction_6	167337.62738278194	NA	2	NA	TRUE	NA	NA	NA	C	coding	232	699	2523	3221	35.0	-23	True	ATTAAA	-12
PB.7452.13	chr21	-	4391	4	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-11	-48774	any annotated donor/acceptor	FALSE	canonical	1	1448	junction_1	29315.479885017896	NA	10	NA	TRUE	NA	NA	NA	C	coding	160	483	1531	2013	30.0	-22	False	AATATA	-13
PB.7452.12	chr21	-	4331	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-11	-48774	any annotated donor/acceptor	FALSE	canonical	1	837	junction_1	32496.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	160	483	1471	1953	30.0	-22	False	AATATA	-13
PB.7452.11	chr21	-	2514	4	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-24	-34521	any annotated donor/acceptor	FALSE	canonical	1	42	junction_1	29688.471207973416	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-35	False	NA	NA
PB.7452.10	chr21	-	1896	1	novel_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-14182	-17482	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	99	300	205	504	35.0	NA	False	NA	NA
PB.8017.1	chr3	-	1786	11	novel_in_catalog	ACAA1	novel	964	3	NA	NA	24	-1	intron_retention	FALSE	canonical	1	450286	junction_10	188252.36270326065	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	14	850	10.0	28	True	AGTAAA	-13
PB.7452.15	chr21	-	2629	2	incomplete-splice_match	TEKT4P2	ENST00000416067.5	1599	4	-10	56638	-10	-56585	3prime_fragment	FALSE	canonical	1	65830	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-21	False	NA	NA
PB.7452.14	chr21	-	4197	3	novel_not_in_catalog	TEKT4P2	novel	1599	4	NA	NA	-10	-48907	any annotated donor/acceptor	FALSE	canonical	1	837	junction_1	32496.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	160	483	1470	1952	75.0	-21	False	AATAAA	-10
PB.8489.2	chr3	-	2377	11	full-splice_match	CCNL1	ENST00000295926.7	2388	11	5	6	5	-6	multi-exon	FALSE	canonical	1	244647	junction_8	393951.2406875882	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	115	1695	35.0	2	True	ATTAAA	-23
PB.8489.3	chr3	-	4112	10	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	6	-7	intron_retention	FALSE	canonical	1	244647	junction_7	368593.6985462448	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	2532	3431	35.0	-3	True	ATTAAA	-22
PB.18.30	chr1	-	2981	12	novel_in_catalog	CCNL2	novel	2792	8	NA	NA	-7	0	intron_retention	FALSE	canonical	1	16097	junction_11	486640.28451746545	NA	4	NA	TRUE	NA	NA	NA	C	coding	298	897	1562	2458	45.0	-22	True	AATAAA	-20
PB.8489.1	chr3	-	4327	11	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	117545	junction_7	413365.76379164495	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	2746	3645	35.0	544	False	ATTAAA	-23
PB.8489.6	chr3	-	4052	11	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	117545	junction_7	413365.76379164495	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	2711	3610	40.0	-6	True	AATAAA	-21
PB.5245.2	chr17	-	1314	6	full-splice_match	MIF4GD	ENST00000325102.12	1306	6	-13	5	-4	0	multi-exon	FALSE	canonical	1	60826	junction_5	115208.91607961598	NA	0	NA	TRUE	NA	NA	NA	A	coding	222	669	139	807	30.0	-1	True	AATAAA	-14
PB.8489.4	chr3	-	4179	11	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	8	-11	intron_retention	FALSE	canonical	1	236802	junction_7	393049.7895516037	NA	3	NA	TRUE	NA	NA	NA	C	coding	299	900	2603	3502	50.0	-1	True	ATTAAA	-18
PB.8489.5	chr3	-	2457	12	novel_in_catalog	CCNL1	novel	1998	11	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	1	117545	junction_8	422887.7414543725	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	818	1780	50.0	1	True	ATTAAA	-18
PB.5590.2	chr19	+	902	5	novel_in_catalog	OAZ1	novel	1012	4	NA	NA	0	22	intron_retention	FALSE	canonical	1	7761680	junction_1	2790503.1125270673	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-3623	False	AATAAA	-16
PB.5590.1	chr19	+	1146	5	novel_in_catalog	OAZ1	novel	1012	4	NA	NA	0	-1	intron_retention	FALSE	canonical	1	7761680	junction_1	2790503.1125270673	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-3623	False	AATAAA	-14
PB.9551.1	chr5	+	4017	4	full-splice_match	GRPEL2	ENST00000329271.7	4089	4	71	1	-1	-1	multi-exon	FALSE	canonical	1	68632	junction_3	36874.57743034714	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	40	717	15.0	-18	True	AATAAA	-21
PB.9089.1	chr4	-	4332	9	full-splice_match	IRF2	ENST00000393593.7	2303	9	32	-2061	0	2061	multi-exon	FALSE	canonical	1	252609	junction_3	77349.7130407371	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	177	1226	5.0	1	True	AATAAA	-15
PB.6245.2	chr19	+	2218	3	full-splice_match	ZNF419	ENST00000415379.6	2186	3	-32	0	0	0	multi-exon	FALSE	canonical	1	17716	junction_1	1247.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	234	1628	25.0	0	True	NA	NA
PB.9089.3	chr4	-	3505	10	novel_not_in_catalog	IRF2	novel	2303	9	NA	NA	139	-1	any annotated donor/acceptor	FALSE	canonical	1	2375	junction_8	175757.10352776395	NA	4	NA	TRUE	NA	NA	NA	C	coding	349	1050	1412	2461	5.0	140	False	AATAAA	-37
PB.10695.6	chr7	-	2799	18	full-splice_match	SMURF1	ENST00000361368.6	5581	18	-88	2870	-7	-2867	multi-exon	FALSE	canonical	1	146931	junction_17	34177.635852565756	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	328	2523	20.0	0	True	AATAAA	-39
PB.10695.1	chr7	-	5684	18	full-splice_match	SMURF1	ENST00000361368.6	5581	18	-100	-3	-19	3	multi-exon	TRUE	canonical	1	146931	junction_17	34177.635852565756	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	340	2535	5.0	-12	True	AATAAA	-18
PB.9089.4	chr4	-	2251	9	full-splice_match	IRF2	ENST00000393593.7	2303	9	32	20	0	-20	multi-exon	FALSE	canonical	1	252609	junction_3	77349.7130407371	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	177	1226	35.0	1	True	AATAAA	-18
PB.9089.7	chr4	-	2027	9	full-splice_match	IRF2	ENST00000393593.7	2303	9	90	186	58	-186	multi-exon	FALSE	canonical	1	252609	junction_3	77349.7130407371	NA	22	1	TRUE	NA	NA	NA	C	coding	349	1050	119	1168	45.0	1	True	AATAAA	-29
PB.6245.3	chr19	+	3698	4	full-splice_match	ZNF419	ENST00000442920.6	1857	4	23	-1864	0	-13	multi-exon	FALSE	canonical	0	0	junction_3	8256.916185167978	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	211	1704	40.0	-12	True	NA	NA
PB.8838.13	chr4	+	1216	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	60	1339	2	-17	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1122	94	1215	65.0	-29	True	NA	NA
PB.3920.1	chr15	+	2187	1	antisense	novelGene_AC087632.1_AS_novelGene_CSNK1G1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	285	858	909	1766	60.0	NA	False	NA	NA
PB.8281.10	chr3	-	3798	19	full-splice_match	CBLB	ENST00000394030.8	6749	19	7	2944	7	0	multi-exon	FALSE	canonical	1	100418	junction_18	38781.02453552112	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	285	3233	70.0	6	True	NA	NA
PB.3920.2	chr15	+	3122	1	antisense	novelGene_AC087632.1_AS_novelGene_CSNK1G1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	285	858	905	1762	75.0	NA	False	NA	NA
PB.10737.8	chr7	+	2940	20	full-splice_match	SRRT	ENST00000611405.4	2905	20	-36	1	-11	-1	multi-exon	FALSE	non_canonical	0	0	junction_17	420078.4888888519	NA	1	NA	TRUE	NA	NA	NA	C	coding	876	2631	196	2826	5.0	19	True	AATAAA	-15
PB.8281.11	chr3	-	3686	18	novel_in_catalog	CBLB	novel	6749	19	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	40574	junction_3	47531.684528217236	NA	1	NA	TRUE	NA	NA	NA	C	coding	938	2817	305	3121	70.0	-14	True	NA	NA
PB.10737.9	chr7	+	3022	21	novel_not_in_catalog	SRRT	novel	582	2	NA	NA	13	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	487745.40071346646	NA	1	1	TRUE	NA	NA	NA	C	coding	899	2700	209	2908	5.0	6	True	AATAAA	-15
PB.10560.2	chr7	+	8965	4	full-splice_match	ZNF736	ENST00000423484.2	7119	4	-73	-1773	-58	1773	multi-exon	FALSE	canonical	1	23868	junction_3	28807.01804923392	NA	22	NA	TRUE	NA	NA	NA	C	coding	427	1284	196	1479	20.0	-60	True	AATAAA	-16
PB.4117.4	chr15	-	2851	19	full-splice_match	TARSL2	ENST00000335968.7	3610	19	148	611	-14	4	multi-exon	FALSE	canonical	1	90545	junction_17	22353.025588287088	NA	2	NA	TRUE	NA	NA	NA	C	coding	802	2409	70	2478	25.0	-1	True	AATAAA	-39
PB.10560.1	chr7	+	7017	4	full-splice_match	ZNF736	ENST00000423484.2	7119	4	-78	180	-63	-180	multi-exon	FALSE	canonical	1	23868	junction_3	28807.01804923392	NA	3	NA	TRUE	NA	NA	NA	C	coding	427	1284	201	1484	40.0	-65	True	GATAAA	-17
PB.10042.12	chr6	-	1510	10	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-525	187159	-13	-3940	3prime_fragment	FALSE	canonical	1	54773	junction_9	42348.89160559249	NA	0	NA	TRUE	NA	NA	NA	B	coding	325	975	534	1508	70.0	0	True	AAGAAA	-23
PB.10042.11	chr6	-	2710	17	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-494	180500	18	-532	3prime_fragment	FALSE	canonical	1	54773	junction_16	121405.25414881145	NA	1	NA	TRUE	NA	NA	NA	B	coding	736	2208	503	2710	45.0	-1	True	NA	NA
PB.10042.10	chr6	-	2781	18	incomplete-splice_match	DST	ENST00000361203.7	22431	98	-525	180374	-13	-406	3prime_fragment	FALSE	canonical	1	54773	junction_17	124626.95696976339	NA	0	NA	TRUE	NA	NA	NA	B	coding	749	2247	534	2780	70.0	0	True	NA	NA
PB.11136.6	chr8	-	1893	8	novel_in_catalog	TMEM68	novel	726	3	NA	NA	7	299	combination_of_known_junctions	FALSE	canonical	1	19978	junction_7	55992.32171959849	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	189	1163	25.0	77	True	AATAAA	-31
PB.12116.10	chrX	-	2301	11	novel_not_in_catalog	LAS1L	novel	2386	13	NA	NA	8	-7	any annotated donor/acceptor	FALSE	canonical	1	6100	junction_1	163514.01626820865	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	53	1471	35.0	19	True	AATAAA	-13
PB.4814.4	chr17	-	2517	12	novel_in_catalog	SHMT1	novel	2437	11	NA	NA	-8	-8	intron_retention	FALSE	canonical	1	43043	junction_11	132034.0538059396	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	320	1648	45.0	4	True	AATAAA	-11
PB.2978.4	chr12	+	3584	5	novel_in_catalog	BCL7A	novel	6247	6	NA	NA	-41	-3	no_combination_of_known_junctions	FALSE	canonical	1	2097	junction_1	92378.55881507353	NA	10	1	TRUE	NA	NA	NA	C	coding	153	462	245	706	15.0	-47	True	AATAAA	-14
PB.4814.6	chr17	-	1726	12	full-splice_match	SHMT1	ENST00000316694.7	2464	12	83	655	47	0	multi-exon	FALSE	canonical	1	94212	junction_9	99137.20044230213	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	59	1504	20.0	8	True	ATTAAA	-12
PB.4814.7	chr17	-	1976	13	novel_in_catalog	SHMT1	novel	2437	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	43043	junction_12	122927.77784025487	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	309	1754	20.0	15	True	ATTAAA	-12
PB.2978.1	chr12	+	2538	6	full-splice_match	BCL7A	ENST00000261822.4	2581	6	99	-56	7	56	multi-exon	FALSE	canonical	1	108221	junction_5	48526.55669465947	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	108	740	60.0	1	True	NA	NA
PB.4814.1	chr17	-	2650	13	novel_in_catalog	SHMT1	novel	2437	11	NA	NA	7	-1	intron_retention	FALSE	canonical	1	43043	junction_12	122927.77784025487	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	329	1774	25.0	-5	True	AATAAA	-18
PB.4814.2	chr17	-	2305	11	full-splice_match	SHMT1	ENST00000354098.7	1656	11	2	-651	2	-4	multi-exon	FALSE	canonical	1	85275	junction_4	109231.66459983113	NA	2	NA	TRUE	NA	NA	NA	C	coding	442	1329	104	1432	30.0	81	False	AATAAA	-15
PB.4814.3	chr17	-	2418	12	full-splice_match	SHMT1	ENST00000316694.7	2464	12	38	8	2	-8	multi-exon	FALSE	canonical	1	94212	junction_9	99137.20044230213	NA	1	NA	TRUE	NA	NA	NA	C	coding	481	1446	104	1549	45.0	81	False	AATAAA	-11
PB.12293.1	chrX	-	4169	10	novel_in_catalog	RBMX	novel	837	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	87723	junction_7	142814.08811769547	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	156	1046	10.0	-1	True	AATAAA	-20
PB.10570.4	chr7	+	5852	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	32	11	32	-11	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	176	531	71	601	30.0	44	True	AATAAA	-9
PB.12293.3	chrX	-	3539	11	novel_in_catalog	RBMX	novel	837	3	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	1	87723	junction_8	139820.05661363466	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	162	1337	10.0	-7	True	AATAAA	-17
PB.1730.1	chr10	+	3249	7	novel_in_catalog	SCART1	novel	4904	10	NA	NA	-12	2	intron_retention	TRUE	canonical	1	4651	junction_3	8576.650991046694	NA	1	NA	TRUE	NA	NA	NA	A	coding	649	1950	83	2032	20.0	-9607	False	NA	NA
PB.6089.8	chr19	-	3228	21	novel_not_in_catalog	SYMPK	novel	1603	10	NA	NA	10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	156690.34973619148	NA	1	NA	TRUE	NA	NA	NA	C	coding	1006	3021	98	3118	55.0	-9	True	AATAAA	-15
PB.12293.4	chrX	-	4430	10	novel_in_catalog	RBMX	novel	837	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	87723	junction_7	139071.17007711297	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	156	1331	15.0	-1	True	AATAAA	-14
PB.10570.3	chr7	+	3786	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	31	2078	31	2067	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	72	602	70.0	43	True	NA	NA
PB.10570.2	chr7	+	3621	3	full-splice_match	VKORC1L1	ENST00000648179.1	5895	3	30	2244	30	1901	multi-exon	FALSE	canonical	1	275337	junction_1	25651.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	73	603	65.0	42	True	NA	NA
PB.2032.6	chr11	-	2806	10	full-splice_match	MEN1	ENST00000312049.10	2761	10	-54	9	-29	-1	multi-exon	FALSE	canonical	1	3962	junction_9	111122.85433876805	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	165	1997	65.0	-38	False	AATACA	-7
PB.2032.7	chr11	-	2702	10	novel_in_catalog	MEN1	novel	2868	8	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	35861	junction_9	101508.37198252768	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	61	1893	65.0	0	True	AATACA	-7
PB.2032.4	chr11	-	2971	10	full-splice_match	MEN1	ENST00000315422.8	3148	10	168	9	8	-1	multi-exon	FALSE	canonical	1	66490	junction_9	92358.83615310208	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	330	2162	65.0	-23	True	AATACA	-7
PB.2032.5	chr11	-	2899	11	novel_not_in_catalog	MEN1	novel	2868	8	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	128536.16126246341	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	258	2090	65.0	-15	True	AATACA	-7
PB.2032.2	chr11	-	2825	10	novel_in_catalog	MEN1	novel	2868	8	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	1	24872	junction_9	104811.81678549678	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	183	2015	70.0	1	True	AATACA	-8
PB.2032.3	chr11	-	2724	10	novel_in_catalog	MEN1	novel	2868	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	9588	junction_8	139318.48646576345	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	67	1914	70.0	-18	True	AATACA	-8
PB.2032.1	chr11	-	3153	9	novel_in_catalog	MEN1	novel	2868	8	NA	NA	7	0	intron_retention	FALSE	canonical	1	24872	junction_8	111147.19113684059	NA	2	1	TRUE	NA	NA	NA	C	coding	350	1053	50	1102	70.0	-1	True	AATACA	-8
PB.8322.4	chr3	+	1639	10	novel_in_catalog	PLA1A	novel	1786	11	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	2970	junction_4	42643.395953759784	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	30	1298	30.0	0	True	AATAAA	-18
PB.1291.1	chr10	-	4462	15	full-splice_match	USP6NL	ENST00000609104.5	11377	15	65	6850	-23	-286	multi-exon	FALSE	canonical	1	95240	junction_6	18212.427113016507	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	331	2817	30.0	2	True	AATAAA	-15
PB.1291.2	chr10	-	4266	14	full-splice_match	USP6NL	ENST00000277575.5	4512	14	-117	363	-117	-363	multi-exon	FALSE	canonical	1	1095	junction_13	37774.43246915648	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	161	2698	50.0	34	True	ATTAAA	-23
PB.1291.3	chr10	-	4271	15	full-splice_match	USP6NL	ENST00000609104.5	11377	15	85	7021	-3	-457	multi-exon	FALSE	canonical	1	95240	junction_6	18212.427113016507	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	311	2797	30.0	111	False	AATATA	-14
PB.1291.4	chr10	-	4297	14	novel_in_catalog	USP6NL	novel	11377	15	NA	NA	-22	-363	no_combination_of_known_junctions	FALSE	canonical	1	3591	junction_13	37187.23025734799	NA	3	1	TRUE	NA	NA	NA	C	coding	749	2250	480	2729	50.0	3	True	ATTAAA	-23
PB.1291.5	chr10	-	5872	14	novel_in_catalog	USP6NL	novel	11377	15	NA	NA	98	-364	intron_retention	FALSE	canonical	1	102314	junction_5	16996.856607052672	NA	4	NA	TRUE	NA	NA	NA	C	coding	665	1998	2308	4305	50.0	36	True	ATTAAA	-22
PB.1291.6	chr10	-	3513	15	full-splice_match	USP6NL	ENST00000609104.5	11377	15	67	7797	-21	-1233	multi-exon	FALSE	canonical	1	95240	junction_6	18212.427113016507	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	329	2815	35.0	4	True	ATTAAA	-20
PB.1291.7	chr10	-	3087	15	full-splice_match	USP6NL	ENST00000609104.5	11377	15	182	8108	94	-1544	multi-exon	FALSE	canonical	1	95240	junction_6	18212.427113016507	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	214	2700	20.0	32	True	AATAGA	-14
PB.9431.16	chr5	+	4400	5	full-splice_match	CDC42SE2	ENST00000505065.1	4352	5	-43	-5	-5	5	multi-exon	FALSE	canonical	1	301445	junction_1	180853.37548878512	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-45	True	AATAAA	-19
PB.7256.14	chr20	-	4826	18	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	12	-9	intron_retention	FALSE	canonical	1	54492	junction_2	259202.05760065877	NA	1	1	TRUE	NA	NA	NA	C	coding	639	1920	15	1934	35.0	11	True	AATAAA	-35
PB.2189.4	chr11	-	1671	14	novel_in_catalog	ALG8	novel	714	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	534	junction_5	198010.31357344904	NA	4	1	TRUE	NA	NA	NA	C	coding	542	1629	26	1654	35.0	4	True	AATAAA	-13
PB.2189.1	chr11	-	2433	13	novel_in_catalog	ALG8	novel	714	6	NA	NA	-7	0	intron_retention	FALSE	canonical	1	25242	junction_12	156627.32886401526	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	861	2414	30.0	-20	True	AATAAA	-15
PB.2189.3	chr11	-	1643	13	full-splice_match	ALG8	ENST00000299626.9	1675	13	27	5	-3	0	multi-exon	FALSE	canonical	1	346937	junction_12	96707.68517461958	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	46	1626	35.0	-16	True	AATAAA	-13
PB.2189.2	chr11	-	1709	14	full-splice_match	ALG8	ENST00000376156.7	1677	14	-30	-2	0	0	multi-exon	FALSE	canonical	1	31766	junction_1	186005.0647081971	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	35	1438	30.0	-5	True	AATAAA	-15
PB.12086.1	chrX	+	2536	13	full-splice_match	MAGED4	ENST00000471932.5	2578	13	34	8	5	4	multi-exon	FALSE	canonical	1	1217	junction_1	6682.412165840017	NA	0	NA	TRUE	NA	NA	NA	A	coding	741	2226	117	2342	35.0	-7	True	ATTAAA	-6
PB.7943.5	chr3	-	3166	17	full-splice_match	RAF1	ENST00000251849.8	3300	17	32	102	32	95	multi-exon	FALSE	canonical	1	477880	junction_4	181828.34069145925	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	409	2355	15.0	-78	False	AATACA	-14
PB.7943.6	chr3	-	5046	16	novel_in_catalog	RAF1	novel	3300	17	NA	NA	-35	-2	intron_retention	FALSE	canonical	1	579216	junction_15	167021.34583252127	NA	5	1	TRUE	NA	NA	NA	C	coding	555	1668	398	2065	15.0	-67	False	AATAAA	-20
PB.7943.7	chr3	-	3930	16	novel_in_catalog	RAF1	novel	3300	17	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	477880	junction_4	175935.48993385804	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	341	1537	15.0	-10	True	AATAAA	-19
PB.8816.4	chr4	-	3085	6	full-splice_match	COX18	ENST00000295890.8	6846	6	15	3746	0	-28	multi-exon	FALSE	canonical	1	90189	junction_5	21141.669498883006	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	78	1079	70.0	-11	True	NA	NA
PB.7943.2	chr3	-	4881	15	novel_in_catalog	RAF1	novel	3300	17	NA	NA	8	-2	intron_retention	FALSE	canonical	1	100190	junction_10	253146.3637022935	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	332	1900	15.0	-1	True	AATAAA	-20
PB.7943.3	chr3	-	3313	18	novel_not_in_catalog	RAF1	novel	3300	17	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	6106	junction_17	309373.02752555086	NA	6	2	TRUE	NA	NA	NA	C	coding	648	1947	456	2402	15.0	-32	False	AATAAA	-20
PB.7256.11	chr20	-	2665	20	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	15148	junction_1	269190.4955176773	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	27	2396	35.0	-1	True	AATAAA	-36
PB.11284.29	chr8	-	3651	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	29	-823	29	-643	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	738	2084	20.0	-2	True	AATAAA	-20
PB.8816.5	chr4	-	2457	7	novel_not_in_catalog	COX18	novel	6846	6	NA	NA	-4	-28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	50580.34909401301	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	111	1112	70.0	-44	True	NA	NA
PB.2008.1	chr11	-	1233	11	full-splice_match	WDR74	ENST00000278856.8	1289	11	56	0	-9	0	multi-exon	FALSE	canonical	1	590564	junction_10	100545.85253251375	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	36	1193	20.0	-33	True	AATAAA	-14
PB.7943.9	chr3	-	3075	16	full-splice_match	RAF1	ENST00000423275.5	2354	16	8	-729	8	-3	multi-exon	FALSE	canonical	1	26896	junction_14	266979.1971239208	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	465	2165	15.0	-1	True	AATAAA	-19
PB.2008.2	chr11	-	2291	9	novel_not_in_catalog	WDR74	novel	371	2	NA	NA	-6	0	intron_retention	FALSE	canonical	1	5360	junction_4	253138.9721856109	NA	2	NA	TRUE	NA	NA	NA	C	coding	200	603	33	635	20.0	-30	True	AATAAA	-14
PB.8354.3	chr3	-	4110	18	incomplete-splice_match	MYLK	ENST00000475616.5	5745	31	91637	-60	-747	0	5prime_fragment	FALSE	canonical	1	178901	junction_17	204889.5972899555	NA	0	NA	TRUE	NA	NA	NA	B	coding	1105	3318	733	4050	85.0	-969	False	ATTAAA	-22
PB.8354.2	chr3	-	3866	16	novel_in_catalog	MYLK	novel	10027	34	NA	NA	-21	-227	combination_of_known_junctions	FALSE	canonical	1	29678	junction_15	227138.26838293893	NA	1	NA	TRUE	NA	NA	NA	B	coding	714	2145	154	2298	30.0	8835	False	AATAAA	-14
PB.8354.1	chr3	-	4107	16	novel_in_catalog	MYLK	novel	10027	34	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	29678	junction_15	227138.26838293893	NA	1	NA	TRUE	NA	NA	NA	B	coding	714	2145	156	2300	20.0	8833	False	AATAAA	-28
PB.8354.7	chr3	-	2339	16	novel_in_catalog	MYLK	novel	10027	34	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	29678	junction_15	227138.26838293893	NA	0	NA	TRUE	NA	NA	NA	B	coding	714	2145	135	2279	85.0	-18	True	ATTAAA	-22
PB.8354.6	chr3	-	2568	16	novel_not_in_catalog	MYLK	novel	10027	34	NA	NA	-650	0	any annotated donor/acceptor	FALSE	canonical	1	389	junction_15	231685.17837496637	NA	0	NA	TRUE	NA	NA	NA	B	coding	733	2202	307	2508	85.0	9403	False	ATTAAA	-22
PB.4915.1	chr17	-	782	3	full-splice_match	CCL3	ENST00000613922.1	778	3	-2	-2	-2	2	multi-exon	FALSE	canonical	1	1303517	junction_1	93110.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	86	364	15.0	-1	True	AATAAA	-24
PB.4915.2	chr17	-	1464	2	full-splice_match	CCL3	ENST00000614051.1	1494	2	26	4	-2	-4	multi-exon	FALSE	canonical	1	1303517	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-18
PB.4915.3	chr17	-	1884	1	novel_in_catalog	CCL3	novel	1494	2	NA	NA	-2	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	AATAAA	-18
PB.5544.1	chr19	+	1973	8	novel_not_in_catalog	BSG	novel	1795	8	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	4075324.7819596427	NA	3	NA	TRUE	NA	NA	NA	B	coding	383	1152	79	1230	5.0	-15	True	AATAAA	-18
PB.5853.5	chr19	-	4259	10	novel_in_catalog	SUGP2	novel	747	6	NA	NA	13	-1	intron_retention	FALSE	canonical	1	153256	junction_1	164284.05298682456	NA	0	NA	TRUE	NA	NA	NA	C	coding	1092	3279	93	3371	5.0	-1	True	AATAAA	-20
PB.5544.3	chr19	+	1003	7	novel_not_in_catalog	BSG	novel	1795	8	NA	NA	2	-454	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	3138753.23690434	NA	2	NA	TRUE	NA	NA	NA	B	coding	267	804	38	841	15.0	2	True	AAAAAG	-16
PB.5544.2	chr19	+	1591	7	novel_not_in_catalog	BSG	novel	1795	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	3138753.23690434	NA	3	NA	TRUE	NA	NA	NA	B	coding	267	804	40	843	5.0	0	True	AATAAA	-23
PB.3717.1	chr14	-	2199	3	novel_not_in_catalog	IGHV3-42	novel	361	2	NA	NA	-16717	8221	any annotated donor/acceptor	FALSE	canonical	1	2072	junction_1	2636.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	1961	False	NA	NA
PB.5853.1	chr19	-	4563	12	novel_not_in_catalog	SUGP2	novel	747	6	NA	NA	14	0	intron_retention	FALSE	canonical	1	11130	junction_2	210874.30658789517	NA	1	1	TRUE	NA	NA	NA	C	coding	1092	3279	92	3370	5.0	0	True	AATAAA	-21
PB.3717.3	chr14	-	3905	2	novel_not_in_catalog	IGHV3-43	novel	434	2	NA	NA	-9553	3326	any annotated donor/acceptor	FALSE	canonical	1	2470	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	109	330	259	588	85.0	2016	False	NA	NA
PB.3717.2	chr14	-	4438	2	novel_not_in_catalog	IGHV3-43	novel	434	2	NA	NA	-9608	3804	any annotated donor/acceptor	FALSE	canonical	1	2470	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	109	330	314	643	30.0	1961	False	NA	NA
PB.5853.8	chr19	-	3108	10	novel_in_catalog	SUGP2	novel	747	6	NA	NA	5188	-1	intron_retention	FALSE	canonical	1	98895	junction_1	159583.33734826415	NA	7	1	TRUE	NA	NA	NA	C	coding	769	2310	435	2744	5.0	7999	False	AATAAA	-20
PB.5853.9	chr19	-	3684	12	novel_not_in_catalog	SUGP2	novel	747	6	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_1	183023.75820465325	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	81	3329	5.0	11	True	AATAAA	-19
PB.3654.2	chr14	-	7653	42	full-splice_match	ATG2B	ENST00000359933.5	13684	42	486	5545	486	4709	multi-exon	FALSE	canonical	1	67099	junction_31	27777.78257131798	NA	0	NA	TRUE	NA	NA	NA	C	coding	2078	6237	409	6645	20.0	-44	True	AATAAA	-20
PB.9249.4	chr5	+	3186	8	full-splice_match	RNF180	ENST00000389100.8	4906	8	-38	1758	0	-1758	multi-exon	FALSE	canonical	1	19543	junction_1	6958.3114272334315	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	111	1889	55.0	-35	True	AATAAA	-30
PB.7495.8	chr21	+	2739	1	novel_in_catalog	IFNAR2	novel	1389	9	NA	NA	15	-14199	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-34	True	AATAAA	-33
PB.7495.9	chr21	+	1371	9	full-splice_match	IFNAR2	ENST00000382264.7	1389	9	18	0	18	0	multi-exon	FALSE	canonical	1	112663	junction_1	84240.4638412414	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	336	1331	15.0	-31	True	NA	NA
PB.9249.1	chr5	+	4229	8	full-splice_match	RNF180	ENST00000389100.8	4906	8	-173	850	-135	-850	multi-exon	FALSE	canonical	1	19543	junction_1	6958.3114272334315	NA	6	NA	TRUE	NA	NA	NA	C	coding	592	1779	246	2024	75.0	2	True	AATAAA	-6
PB.7495.4	chr21	+	3086	10	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	134656.76042937217	NA	10	1	TRUE	NA	NA	NA	C	coding	515	1548	397	1944	10.0	-46	True	AATACA	-13
PB.7495.5	chr21	+	2910	9	incomplete-splice_match	AP000295.1	ENST00000646150.1	3770	15	4	32647	4	-18699	3prime_fragment	FALSE	canonical	1	112663	junction_1	96958.5112689153	NA	0	NA	TRUE	NA	NA	NA	B	coding	515	1548	350	1897	85.0	-45	True	GATAAA	-24
PB.7495.6	chr21	+	2937	9	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	11	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	153325.82258624933	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	1152	1805	20.0	-38	True	AAAAAG	-26
PB.7495.7	chr21	+	2837	10	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	15	-207	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	125498.51989899922	NA	2	1	TRUE	NA	NA	NA	C	coding	515	1548	339	1886	30.0	-34	True	AATGAA	-11
PB.7495.1	chr21	+	1446	9	full-splice_match	IFNAR2	ENST00000404220.7	4284	9	-81	2919	-11	0	multi-exon	FALSE	canonical	1	45767	junction_1	103599.676839204	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	411	1406	15.0	1	True	NA	NA
PB.7495.2	chr21	+	2851	10	novel_not_in_catalog	IFNAR2	novel	1389	9	NA	NA	0	-183	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	125498.51989899922	NA	9	NA	TRUE	NA	NA	NA	C	coding	515	1548	354	1901	20.0	-49	True	AATGAA	-35
PB.11985.7	chrX	-	2210	19	novel_not_in_catalog	CTPS2	novel	4319	19	NA	NA	-46	1	any annotated donor/acceptor	FALSE	canonical	1	13476	junction_18	52367.06734036428	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	181	1941	25.0	6779	False	ATTAAA	-20
PB.12045.1	chrX	-	573	3	full-splice_match	NDUFB11	ENST00000377811.3	1388	3	812	3	346	1	multi-exon	FALSE	canonical	1	2557442	junction_1	568585.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	153	462	14	475	15.0	-2	True	ATTAAA	-14
PB.11985.4	chrX	-	3672	19	novel_not_in_catalog	CTPS2	novel	4319	19	NA	NA	-52	2	any annotated donor/acceptor	FALSE	canonical	1	278	junction_18	54757.12551729379	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	96	1856	15.0	6489	False	NA	NA
PB.8225.1	chr3	+	3431	7	novel_not_in_catalog	SAMMSON	novel	1657	4	NA	NA	0	15483	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	756.774221430819	NA	26	3	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	0	True	AATAAA	-28
PB.5756.1	chr19	+	1280	7	full-splice_match	ASNA1	ENST00000357332.7	1280	7	0	0	0	0	multi-exon	FALSE	canonical	1	1083387	junction_3	120769.04472138821	NA	0	NA	TRUE	NA	NA	NA	A	coding	348	1047	15	1061	20.0	-5	True	AATAAA	-16
PB.1108.8	chr1	-	3392	21	novel_not_in_catalog	INTS7	novel	4447	21	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	1	7189	junction_20	56782.295647036844	NA	0	NA	TRUE	NA	NA	NA	C	coding	936	2811	114	2924	40.0	-12	True	NA	NA
PB.9481.12	chr5	+	3326	17	novel_in_catalog	CTNNA1	novel	696	6	NA	NA	7	-119	no_combination_of_known_junctions	FALSE	canonical	1	7791	junction_9	500269.5286329254	NA	5	2	TRUE	NA	NA	NA	C	coding	875	2628	76	2703	25.0	13	True	AATAAA	-18
PB.2195.6	chr11	+	3743	7	incomplete-splice_match	DDIAS	ENST00000525361.5	1830	8	29	23622	0	0	3prime_fragment	FALSE	canonical	1	5360	junction_3	23631.12434022836	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	427	3423	35.0	-9	True	AATAAA	-14
PB.2195.7	chr11	+	2992	6	full-splice_match	DDIAS	ENST00000533655.5	3533	6	10	531	1	-527	multi-exon	FALSE	canonical	1	28332	junction_1	12452.872012511812	NA	3	NA	TRUE	NA	NA	NA	C	coding	930	2790	203	2992	70.0	1	True	ATTAAA	-26
PB.2195.4	chr11	+	3627	6	novel_in_catalog	DDIAS	novel	889	5	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	1	5360	junction_3	20556.229897527417	NA	1	NA	TRUE	NA	NA	NA	C	coding	697	2094	1217	3310	30.0	-14	True	AATAAA	-11
PB.2195.5	chr11	+	2623	6	full-splice_match	DDIAS	ENST00000533655.5	3533	6	5	905	2	-901	multi-exon	FALSE	canonical	1	28332	junction_1	12452.872012511812	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2415	208	2622	45.0	-4	True	NA	NA
PB.2195.2	chr11	+	3613	7	novel_in_catalog	DDIAS	novel	889	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	1683	junction_3	24440.00413029607	NA	3	1	TRUE	NA	NA	NA	C	coding	998	2997	297	3293	35.0	-18	False	AATAAA	-14
PB.2195.3	chr11	+	2576	5	full-splice_match	DDIAS	ENST00000525388.5	961	5	-23	-1592	-8	-847	multi-exon	FALSE	canonical	1	1095	junction_1	26194.406416256123	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1566	1010	2575	65.0	-17	False	NA	NA
PB.2195.1	chr11	+	3422	5	full-splice_match	DDIAS	ENST00000524921.5	607	5	18	-2833	-11	0	multi-exon	TRUE	canonical	1	17114	junction_4	19184.125825470914	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	1009	3102	35.0	-20	False	AATAAA	-14
PB.11985.8	chrX	-	2234	19	full-splice_match	CTPS2	ENST00000380241.7	3526	19	48	1244	48	-1	multi-exon	FALSE	canonical	1	20065	junction_18	51198.90578571305	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	207	1967	25.0	21	True	ATTAAA	-18
PB.2195.8	chr11	+	3525	6	full-splice_match	DDIAS	ENST00000533655.5	3533	6	4	4	1	0	multi-exon	FALSE	canonical	1	28332	junction_1	12452.872012511812	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	209	3205	35.0	-5	True	AATAAA	-14
PB.2195.9	chr11	+	2875	5	full-splice_match	DDIAS	ENST00000524921.5	607	5	38	-2306	0	-527	multi-exon	FALSE	canonical	1	17114	junction_4	19184.125825470914	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1887	989	2875	70.0	0	True	ATTAAA	-26
PB.6744.1	chr2	-	3183	1	novel_in_catalog	MZT2A	novel	382	3	NA	NA	-10	154	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	189	570	1251	1820	90.0	-3	True	NA	NA
PB.7106.8	chr2	-	2521	6	novel_in_catalog	MTERF4	novel	3993	5	NA	NA	-3	-575	combination_of_known_junctions	FALSE	canonical	1	35566	junction_3	55764.49879053877	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	30	755	35.0	-16	True	AATAAA	-20
PB.5439.18	chr18	+	3144	8	novel_not_in_catalog	AC011825.3	novel	565	5	NA	NA	73867	19781	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	47420.315036094486	NA	3	NA	TRUE	NA	NA	NA	B	coding	245	738	82	819	35.0	8	True	ATTAAA	-15
PB.12201.19	chrX	+	1918	2	full-splice_match	PLP1	ENST00000496836.1	548	2	424	-1794	424	-240	multi-exon	FALSE	canonical	1	2414883	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-5	True	GATAAA	-19
PB.11715.1	chr9	-	3545	5	novel_not_in_catalog	LPAR1	novel	3637	5	NA	NA	-513	9	any annotated donor/acceptor	TRUE	canonical	1	15993	junction_4	142408.36140194684	NA	0	NA	TRUE	NA	NA	NA	A	coding	364	1095	284	1378	15.0	-14	True	AATAAA	-23
PB.12201.12	chrX	+	2370	7	full-splice_match	PLP1	ENST00000619236.1	2896	7	26	500	2	-497	multi-exon	FALSE	canonical	1	325069	junction_3	794610.5522216003	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	121	849	70.0	2	True	NA	NA
PB.12201.13	chrX	+	2775	7	novel_in_catalog	PLP1	novel	786	5	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	1342	junction_1	1090089.7605295961	NA	1	1	TRUE	NA	NA	NA	C	coding	250	753	4	756	20.0	-9416	False	AATAAA	-21
PB.12201.10	chrX	+	4516	5	novel_in_catalog	PLP1	novel	786	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1852946	junction_1	317612.77629479504	NA	1	NA	TRUE	NA	NA	NA	C	coding	160	483	124	606	25.0	-1	True	AATAAA	-20
PB.12201.11	chrX	+	2630	7	full-splice_match	PLP1	ENST00000619236.1	2896	7	24	242	0	-239	multi-exon	FALSE	canonical	1	325069	junction_3	794610.5522216003	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	123	851	10.0	0	True	GATAAA	-20
PB.5439.16	chr18	+	2164	7	incomplete-splice_match	RNF138	ENST00000261593.7	3570	8	833	1037	-2	-191	5prime_fragment	FALSE	canonical	1	55586	junction_2	34292.09477902062	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	90	827	30.0	0	True	AATAAA	-34
PB.12039.1	chrX	-	3278	7	novel_not_in_catalog	ZNF674	novel	4073	6	NA	NA	-5	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	12805.936167999937	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	217	1947	25.0	-42	False	AATAAA	-19
PB.5439.14	chr18	+	2394	6	novel_in_catalog	AC011825.3	novel	565	5	NA	NA	73858	19031	no_combination_of_known_junctions	FALSE	canonical	1	12559	junction_3	51414.034280923726	NA	1	NA	TRUE	NA	NA	NA	B	coding	226	681	91	771	20.0	-1	True	AAGAAA	-18
PB.5439.15	chr18	+	3200	7	incomplete-splice_match	RNF138	ENST00000261593.7	3570	8	833	1	-2	-1	5prime_fragment	FALSE	canonical	1	55586	junction_2	34292.09477902062	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	90	827	35.0	0	True	ATTAAA	-15
PB.8260.7	chr3	-	5597	16	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-6	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	221407.01993959752	NA	4	NA	TRUE	NA	NA	NA	C	coding	669	2010	187	2196	35.0	-1	True	AATAAA	-36
PB.8260.6	chr3	-	6038	15	novel_in_catalog	DCBLD2	novel	6122	16	NA	NA	2	-30	no_combination_of_known_junctions	FALSE	canonical	1	8980	junction_12	225056.05531435533	NA	2	NA	TRUE	NA	NA	NA	C	coding	478	1437	1201	2637	35.0	7	True	AATAAA	-36
PB.5576.2	chr19	-	2557	17	novel_not_in_catalog	TCF3	novel	4451	19	NA	NA	28	-7	intron_retention	FALSE	canonical	1	42	junction_16	234697.75455478605	NA	1	NA	TRUE	NA	NA	NA	B	coding	509	1530	293	1822	45.0	0	True	ATTAAA	-10
PB.5576.3	chr19	-	2528	20	novel_in_catalog	TCF3	novel	4451	19	NA	NA	-93	-7	combination_of_known_junctions	FALSE	canonical	1	181864	junction_19	208968.85458832298	NA	2	NA	TRUE	NA	NA	NA	B	coding	648	1947	181	2127	45.0	1834	False	ATTAAA	-10
PB.8260.9	chr3	-	6156	16	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	7	-31	any annotated donor/acceptor	FALSE	canonical	1	97	junction_11	220980.6520718248	NA	7	1	TRUE	NA	NA	NA	C	coding	538	1617	1140	2756	35.0	12	True	AATAAA	-35
PB.5576.1	chr19	-	2847	19	novel_in_catalog	TCF3	novel	4451	19	NA	NA	-87	-7	intron_retention	TRUE	canonical	1	181864	junction_18	211759.22370761092	NA	1	NA	TRUE	NA	NA	NA	B	coding	645	1938	175	2112	45.0	1840	False	ATTAAA	-10
PB.5576.4	chr19	-	2793	20	novel_in_catalog	TCF3	novel	4451	19	NA	NA	97	-4	combination_of_known_junctions	FALSE	canonical	1	47918	junction_3	219660.36799694662	NA	0	NA	TRUE	NA	NA	NA	B	coding	614	1845	419	2263	25.0	3608	False	AATAAA	-13
PB.5576.5	chr19	-	2326	21	novel_not_in_catalog	TCF3	novel	4451	19	NA	NA	-8	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_20	245358.10061369487	NA	0	NA	TRUE	NA	NA	NA	B	coding	645	1938	188	2125	25.0	1	True	AATAAA	-13
PB.4981.7	chr17	-	3120	8	novel_in_catalog	DNAJC7	novel	2022	14	NA	NA	-13	887	intron_retention	FALSE	canonical	1	649062	junction_4	231148.81474681443	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	21	950	95.0	-2	True	NA	NA
PB.4981.6	chr17	-	1640	13	novel_in_catalog	DNAJC7	novel	2022	14	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	9504	junction_10	400319.5844882353	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	18	1388	80.0	1	True	NA	NA
PB.4981.5	chr17	-	1753	14	full-splice_match	DNAJC7	ENST00000426588.7	1774	14	20	1	14	-1	multi-exon	FALSE	canonical	1	14057	junction_13	390247.03304336336	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	184	1500	85.0	1390	False	NA	NA
PB.4981.4	chr17	-	1961	15	novel_in_catalog	DNAJC7	novel	2022	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	24242	junction_14	452387.93024116225	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	391	1707	85.0	-5	True	NA	NA
PB.4981.3	chr17	-	1686	13	full-splice_match	DNAJC7	ENST00000316603.11	1468	13	8	-226	8	-5	multi-exon	FALSE	canonical	1	3184	junction_12	398797.39415198006	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	75	1391	5.0	23	True	NA	NA
PB.4981.2	chr17	-	1975	14	full-splice_match	DNAJC7	ENST00000457167.8	2022	14	0	47	0	-1	multi-exon	FALSE	canonical	1	649062	junction_10	278123.86849485675	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	238	1722	85.0	-1	True	NA	NA
PB.4981.1	chr17	-	3662	16	novel_not_in_catalog	DNAJC7	novel	2022	14	NA	NA	-58	2408	any annotated donor/acceptor	FALSE	canonical	1	2219	junction_1	499606.1473867146	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	66	995	100.0	-1	True	AAAAAG	-24
PB.9976.5	chr6	+	6254	26	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	558	junction_5	40603.74739442653	NA	8	NA	TRUE	NA	NA	NA	C	coding	944	2835	589	3423	20.0	-11	True	ATTAAA	-19
PB.9976.8	chr6	+	6186	25	full-splice_match	DAAM2	ENST00000274867.8	6194	25	8	0	0	0	multi-exon	FALSE	canonical	1	47997	junction_1	25979.198062531148	NA	4	NA	TRUE	NA	NA	NA	C	coding	1068	3207	149	3355	20.0	-2	True	ATTAAA	-19
PB.9976.9	chr6	+	6276	26	novel_not_in_catalog	DAAM2	novel	3871	26	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	117	junction_1	39136.2673750883	NA	2	NA	TRUE	NA	NA	NA	C	coding	1068	3207	239	3445	20.0	-1	True	ATTAAA	-19
PB.682.10	chr1	-	713	6	full-splice_match	RBM8A	ENST00000583313.6	4961	6	83	4165	-6	-79	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	coding	174	525	28	552	15.0	8854	False	AATAAA	-23
PB.4981.8	chr17	-	2313	9	incomplete-splice_match	DNAJC7	ENST00000457167.8	2022	14	203	10117	-27	887	3prime_fragment	FALSE	canonical	1	649062	junction_5	291712.19349343283	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	35	1048	95.0	-16	True	NA	NA
PB.5785.2	chr19	-	1931	9	full-splice_match	GIPC1	ENST00000393033.8	1926	9	-5	0	-5	0	multi-exon	FALSE	canonical	1	93758	junction_8	428143.8360819695	NA	2	1	TRUE	NA	NA	NA	C	coding	333	1002	276	1277	5.0	19	False	CATAAA	-17
PB.1313.2	chr10	+	3553	6	full-splice_match	PTER	ENST00000378000.5	3777	6	-60	284	-19	-284	multi-exon	FALSE	canonical	1	18176	junction_2	48065.42231833608	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	307	1356	25.0	-86	False	NA	NA
PB.5785.1	chr19	-	1866	8	full-splice_match	GIPC1	ENST00000586027.5	1386	8	5	-485	5	1	multi-exon	FALSE	canonical	1	68211	junction_7	432665.60109750024	NA	3	2	TRUE	NA	NA	NA	C	coding	333	1002	210	1211	5.0	-13	True	CATAAA	-18
PB.23.2	chr1	-	2736	2	full-splice_match	SSU72	ENST00000359060.5	4176	2	-59	1499	-56	-1499	multi-exon	FALSE	canonical	1	1447954	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	87	548	15.0	-13	True	ATTAAA	-18
PB.1379.9	chr10	+	2166	10	novel_not_in_catalog	BMS1	novel	7753	23	NA	NA	0	-37758	any annotated donor/acceptor	FALSE	canonical	1	29009	junction_1	125710.29644384743	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	232	2166	60.0	6	True	NA	NA
PB.1379.8	chr10	+	4385	23	novel_not_in_catalog	BMS1	novel	7753	23	NA	NA	0	-3536	any annotated donor/acceptor	FALSE	canonical	1	29009	junction_1	131718.402341537	NA	0	NA	TRUE	NA	NA	NA	C	coding	1282	3849	232	4080	15.0	6	True	ATTAAA	-14
PB.4042.1	chr15	+	1859	10	full-splice_match	TM6SF1	ENST00000322019.13	2074	10	216	-1	-25	1	multi-exon	FALSE	canonical	1	55973	junction_1	17405.653982060252	NA	0	NA	TRUE	NA	NA	NA	A	coding	370	1113	59	1171	55.0	-22	True	AATAAA	-20
PB.1379.6	chr10	+	4116	23	novel_not_in_catalog	BMS1	novel	7753	23	NA	NA	-17	-3536	any annotated donor/acceptor	FALSE	canonical	1	3928	junction_16	139600.48342699104	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	81	2741	15.0	-11	True	ATTAAA	-14
PB.1379.5	chr10	+	4235	23	full-splice_match	BMS1	ENST00000374518.5	7753	23	-17	3535	-17	-3535	multi-exon	FALSE	canonical	1	129281	junction_4	118013.94073184709	NA	1	NA	TRUE	NA	NA	NA	C	coding	1282	3849	81	3929	10.0	-11	True	ATTAAA	-15
PB.1379.4	chr10	+	2170	11	incomplete-splice_match	BMS1	ENST00000374518.5	7753	23	-18	37414	-18	-37414	3prime_fragment	FALSE	canonical	1	129281	junction_4	92680.98546217557	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2088	82	2169	35.0	-12	True	NA	NA
PB.1379.3	chr10	+	3620	2	incomplete-splice_match	BMS1	ENST00000374518.5	7753	23	-18	47004	-18	-47004	intron_retention	FALSE	canonical	1	164077	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-12	True	TTTAAA	-6
PB.1379.2	chr10	+	2005	10	incomplete-splice_match	BMS1	ENST00000374518.5	7753	23	-7	37758	-7	-37758	3prime_fragment	FALSE	canonical	1	129281	junction_4	97424.8314492439	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1935	71	2005	60.0	-1	True	NA	NA
PB.1379.1	chr10	+	2499	15	incomplete-splice_match	BMS1	ENST00000374518.5	7753	23	-18	17605	-18	-17605	3prime_fragment	FALSE	canonical	1	129281	junction_4	105158.61116372094	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2418	82	2499	60.0	-12	True	AATGAA	-10
PB.8603.13	chr3	-	1641	1	incomplete-splice_match	ATP13A3	ENST00000439040.5	7720	33	94044	8	8743	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-5	True	AATAAA	-15
PB.9951.3	chr6	+	3549	12	full-splice_match	MAPK14	ENST00000229794.8	3779	12	-10	240	-10	-240	multi-exon	FALSE	canonical	1	309743	junction_9	93457.1833399376	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	399	1481	30.0	0	True	AATAAA	-17
PB.9951.2	chr6	+	3208	9	full-splice_match	MAPK14	ENST00000496250.5	2750	9	-411	-47	-23	47	multi-exon	FALSE	canonical	1	373311	junction_2	84268.6111476272	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	412	1182	85.0	0	True	AGTAAA	-17
PB.9951.1	chr6	+	4333	12	full-splice_match	MAPK14	ENST00000229795.7	4319	12	-3	-11	-3	11	multi-exon	FALSE	canonical	1	124489	junction_9	153679.26149442245	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	451	1533	10.0	-1380	False	NA	NA
PB.1088.7	chr1	+	4161	20	novel_not_in_catalog	CR2	novel	4063	19	NA	NA	100	-15	any annotated donor/acceptor	FALSE	canonical	1	397	junction_9	47282.250127437605	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	90	1664	60.0	2	True	AATAAA	-11
PB.9951.7	chr6	+	2941	12	full-splice_match	MAPK14	ENST00000229794.8	3779	12	38	800	26	-800	multi-exon	FALSE	canonical	1	309743	junction_9	93457.1833399376	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	351	1433	25.0	0	True	AATAAA	-19
PB.9951.6	chr6	+	3588	12	full-splice_match	MAPK14	ENST00000229794.8	3779	12	194	-3	182	3	multi-exon	FALSE	canonical	1	309743	junction_9	93457.1833399376	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	195	1277	25.0	-1124	False	AATAAA	-18
PB.4686.1	chr17	+	822	6	full-splice_match	PSMB6	ENST00000270586.7	852	6	20	10	3	-9	multi-exon	FALSE	canonical	1	2052910	junction_1	477429.9879678276	NA	0	NA	TRUE	NA	NA	NA	A	coding	239	720	32	751	15.0	0	True	AATAAA	-14
PB.9951.4	chr6	+	2832	12	full-splice_match	MAPK14	ENST00000229794.8	3779	12	-7	954	-7	-954	multi-exon	FALSE	canonical	1	309743	junction_9	93457.1833399376	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	396	1478	20.0	3	True	ATTAAA	-12
PB.11456.3	chr9	+	3060	8	full-splice_match	TYRP1	ENST00000388918.9	2851	8	-60	-149	-60	149	multi-exon	FALSE	canonical	1	226045	junction_1	84082.09332356961	NA	28	2	TRUE	NA	NA	NA	C	coding	537	1614	190	1803	35.0	-77	True	AATAAA	-24
PB.11456.2	chr9	+	2631	8	full-splice_match	TYRP1	ENST00000388918.9	2851	8	17	203	17	-203	multi-exon	FALSE	canonical	1	226045	junction_1	84082.09332356961	NA	2	NA	TRUE	NA	NA	NA	C	coding	537	1614	113	1726	10.0	0	True	AGTAAA	-13
PB.9951.9	chr6	+	3149	12	full-splice_match	MAPK14	ENST00000229794.8	3779	12	50	580	38	-580	multi-exon	FALSE	canonical	1	309743	junction_9	93457.1833399376	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	339	1421	20.0	12	True	TATAAA	-14
PB.9951.8	chr6	+	3916	8	incomplete-splice_match	MAPK14	ENST00000496250.5	2750	9	-347	18559	29	2607	3prime_fragment	FALSE	canonical	1	373311	junction_2	85122.99826337732	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	348	1040	80.0	3	True	NA	NA
PB.8831.1	chr4	+	1607	10	novel_not_in_catalog	ART3	novel	502	4	NA	NA	-20656	1	any annotated donor/acceptor	FALSE	canonical	1	2524	junction_1	15657.079839839584	NA	0	NA	TRUE	NA	NA	NA	B	coding	367	1104	231	1334	35.0	-5962	False	AATAAA	-21
PB.1088.1	chr1	+	3835	19	full-splice_match	CR2	ENST00000367058.7	4063	19	213	15	-208	-15	multi-exon	FALSE	canonical	1	47041	junction_1	27645.111581133715	NA	2	1	TRUE	NA	NA	NA	C	coding	910	2733	346	3078	60.0	85	False	AATAAA	-11
PB.952.1	chr1	+	1957	1	intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.1088.3	chr1	+	4361	14	incomplete-splice_match	CR2	ENST00000367057.7	4240	20	99	13124	99	4799	intron_retention	FALSE	canonical	1	20177	junction_10	41496.66928546172	NA	5	NA	TRUE	NA	NA	NA	C	coding	925	2778	91	2868	25.0	1	True	AATAAA	-21
PB.11665.1	chr9	-	7321	24	full-splice_match	PTCH1	ENST00000429896.6	6563	24	-9	-749	-9	-1	multi-exon	FALSE	canonical	1	9049	junction_23	22841.800423478253	NA	3	NA	TRUE	NA	NA	NA	A	coding	1296	3891	451	4341	25.0	0	True	AATAAA	-21
PB.9431.11	chr5	+	3018	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-17	-669	intron_retention	FALSE	canonical	1	301445	junction_1	162468.6682725011	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-57	True	NA	NA
PB.2892.1	chr12	-	1563	3	full-splice_match	C12orf76	ENST00000551185.2	496	3	36	-1103	-7	1	multi-exon	FALSE	canonical	1	5130	junction_1	3482.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	129	390	1	390	25.0	-8	True	ATTAAA	-17
PB.2892.2	chr12	-	1454	2	incomplete-splice_match	C12orf76	ENST00000549724.1	1302	3	751	-717	-12	1	5prime_fragment	FALSE	canonical	1	69065	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-13	True	ATTAAA	-17
PB.4995.1	chr17	+	2459	5	novel_not_in_catalog	COASY	novel	574	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	12936	junction_3	399230.38451531966	NA	11	NA	TRUE	NA	NA	NA	C	coding	471	1416	487	1902	10.0	-14	True	ATTAAA	-16
PB.4995.2	chr17	+	3270	8	novel_in_catalog	COASY	novel	574	2	NA	NA	1	0	intron_retention	FALSE	canonical	1	19958	junction_1	322699.2181653538	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	1885	2964	15.0	-13	True	ATTAAA	-14
PB.4995.3	chr17	+	2096	10	full-splice_match	COASY	ENST00000421097.6	2071	10	-9	-16	1	1	multi-exon	FALSE	canonical	1	124116	junction_1	260872.41271932147	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	94	1788	10.0	-13	True	ATTAAA	-16
PB.4995.4	chr17	+	1773	10	novel_in_catalog	COASY	novel	574	2	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	22475	junction_1	287087.5178079601	NA	1	1	TRUE	NA	NA	NA	C	coding	269	810	658	1467	15.0	-13	True	ATTAAA	-14
PB.4995.5	chr17	+	2748	8	novel_in_catalog	COASY	novel	574	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	550851	junction_2	169483.82411514642	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	476	2440	10.0	-3	True	ATTAAA	-16
PB.4995.6	chr17	+	3385	7	full-splice_match	COASY	ENST00000591753.1	2225	7	-1158	-2	1	1	multi-exon	FALSE	canonical	1	550851	junction_1	182971.34349923942	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	1998	3077	10.0	-2	True	ATTAAA	-16
PB.4995.7	chr17	+	4126	1	genic	COASY	novel	NA	NA	NA	NA	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	235	708	473	1180	10.0	0	True	ATTAAA	-16
PB.4995.8	chr17	+	2958	6	novel_in_catalog	COASY	novel	574	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	814507	junction_5	98008.35967120355	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	473	1846	15.0	0	True	ATTAAA	-14
PB.4995.9	chr17	+	2351	10	novel_in_catalog	COASY	novel	574	2	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	19958	junction_1	287751.3875496788	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	349	2043	10.0	0	True	ATTAAA	-16
PB.11503.11	chr9	+	3598	21	full-splice_match	NFX1	ENST00000379521.8	3609	21	2	9	2	-9	multi-exon	FALSE	canonical	1	141865	junction_19	76147.62194717575	NA	1	NA	TRUE	NA	NA	NA	C	coding	1024	3075	60	3134	80.0	-13	True	NA	NA
PB.11503.16	chr9	+	4020	16	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	-2	-232	any annotated donor/acceptor	FALSE	canonical	1	3493	junction_1	108204.07321550639	NA	2	1	TRUE	NA	NA	NA	C	coding	831	2496	774	3269	85.0	16	True	NA	NA
PB.11503.17	chr9	+	3283	16	full-splice_match	NFX1	ENST00000318524.6	3513	16	-2	232	-2	-232	multi-exon	FALSE	canonical	1	161496	junction_15	63844.51143151531	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	31	2532	85.0	16	True	NA	NA
PB.11503.14	chr9	+	3209	15	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	4	-232	any annotated donor/acceptor	TRUE	canonical	1	6568	junction_9	109702.57306313956	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	58	1992	85.0	-11	True	NA	NA
PB.11503.15	chr9	+	2854	18	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	-15	2282	any annotated donor/acceptor	FALSE	canonical	1	71844	junction_11	87901.55041095987	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2811	44	2854	50.0	3	True	NA	NA
PB.3976.4	chr15	+	3661	12	full-splice_match	CLK3	ENST00000454830.6	3787	12	41	85	1	-1	multi-exon	FALSE	canonical	1	378758	junction_1	114840.10257371113	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	2320	3429	20.0	-14	True	AATAAA	-18
PB.3976.5	chr15	+	1671	12	novel_in_catalog	CLK3	novel	1846	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	41101	junction_3	196969.90119388944	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	629	1438	20.0	-14	True	AATAAA	-19
PB.3976.6	chr15	+	4605	10	novel_in_catalog	CLK3	novel	1846	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	378758	junction_1	125559.70090669132	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	2668	3711	20.0	-7	True	AATAAA	-18
PB.3976.7	chr15	+	2427	12	incomplete-splice_match	CLK3	ENST00000395066.7	2621	13	858	10	-3	0	intron_retention	FALSE	canonical	1	378758	junction_1	126262.59055091535	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	48	1532	20.0	1	True	AATAAA	-19
PB.7643.3	chr22	-	2346	3	novel_not_in_catalog	ZNF280A	novel	2148	2	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	751	junction_1	915.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	455	2083	20.0	-1	True	NA	NA
PB.3976.1	chr15	+	1770	13	full-splice_match	CLK3	ENST00000395066.7	2621	13	841	10	-1	0	multi-exon	TRUE	canonical	1	378758	junction_1	120905.93430006744	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	65	1537	20.0	-16	True	AATAAA	-19
PB.3976.2	chr15	+	3945	11	novel_in_catalog	CLK3	novel	1846	13	NA	NA	0	3	intron_retention	FALSE	canonical	1	378758	junction_1	119452.64138917146	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	2676	3707	15.0	-15	True	AATAAA	-24
PB.3976.3	chr15	+	2346	11	novel_in_catalog	CLK3	novel	1846	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	41101	junction_3	206431.01561996443	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	630	1451	20.0	-15	True	AATAAA	-19
PB.7720.7	chr22	-	2676	7	novel_not_in_catalog	PISD	novel	2669	8	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	236520.34353494603	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	278	829	70.0	-2	True	NA	NA
PB.7720.6	chr22	-	2639	7	novel_in_catalog	PISD	novel	2669	8	NA	NA	-17	0	intron_retention	FALSE	canonical	1	137738	junction_4	181866.65296829125	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	31	924	70.0	-24	True	NA	NA
PB.7720.5	chr22	-	2728	8	novel_in_catalog	PISD	novel	2669	8	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	4575	junction_7	206007.45278880233	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	507	1631	70.0	7734	False	NA	NA
PB.7720.4	chr22	-	2776	10	novel_in_catalog	PISD	novel	2669	8	NA	NA	-16	0	no_combination_of_known_junctions	FALSE	canonical	1	23102	junction_7	186597.18602882666	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	555	1679	70.0	-23	True	NA	NA
PB.7720.3	chr22	-	2817	10	novel_in_catalog	PISD	novel	2669	8	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	6908	junction_9	220092.9450437353	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	596	1720	70.0	7700	False	NA	NA
PB.7720.2	chr22	-	2933	9	novel_in_catalog	PISD	novel	2669	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	23102	junction_6	194862.57991466703	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	753	1084	1836	70.0	-4	True	NA	NA
PB.7720.1	chr22	-	2338	8	full-splice_match	PISD	ENST00000439502.6	1963	8	213	-588	2	0	multi-exon	FALSE	canonical	1	137738	junction_5	171517.7400366076	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	12	1241	70.0	-5	True	NA	NA
PB.4060.8	chr15	+	3166	4	novel_in_catalog	AEN	novel	3117	4	NA	NA	146	0	combination_of_known_junctions	FALSE	canonical	1	11987	junction_1	136909.31657934102	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	202	1179	10.0	-1933	False	AATAAA	-18
PB.3099.8	chr13	+	4907	35	full-splice_match	PDS5B	ENST00000315596.14	7497	35	80	2510	-36	-399	multi-exon	FALSE	canonical	1	104646	junction_1	64889.18121133662	NA	1	NA	TRUE	NA	NA	NA	C	coding	1447	4344	107	4450	25.0	-6	True	NA	NA
PB.3099.9	chr13	+	6129	35	full-splice_match	PDS5B	ENST00000315596.14	7497	35	89	1279	-27	832	multi-exon	FALSE	canonical	1	104646	junction_1	64889.18121133662	NA	9	NA	TRUE	NA	NA	NA	C	coding	1447	4344	98	4441	40.0	3	True	AATAAA	-17
PB.3099.1	chr13	+	3172	27	incomplete-splice_match	PDS5B	ENST00000450460.5	5246	34	15	17756	-6	-12394	3prime_fragment	FALSE	canonical	1	104646	junction_1	42934.79454687706	NA	0	NA	TRUE	NA	NA	NA	C	coding	1040	3120	51	3170	55.0	13	True	AATGAA	-24
PB.3099.2	chr13	+	7269	35	full-splice_match	PDS5B	ENST00000315596.14	7497	35	26	202	-2	-202	multi-exon	TRUE	canonical	1	104646	junction_1	64889.18121133662	NA	3	NA	TRUE	NA	NA	NA	C	coding	1447	4344	161	4504	30.0	1	True	ATTAAA	-26
PB.3099.3	chr13	+	4039	32	incomplete-splice_match	PDS5B	ENST00000450460.5	5246	34	-29	5467	-24	-105	3prime_fragment	FALSE	canonical	1	104646	junction_1	63569.25758600127	NA	1	NA	TRUE	NA	NA	NA	C	coding	1315	3945	95	4039	50.0	6	True	AAAAAG	-6
PB.3099.4	chr13	+	7469	35	full-splice_match	PDS5B	ENST00000315596.14	7497	35	26	2	-2	-2	multi-exon	FALSE	canonical	1	104646	junction_1	64889.18121133662	NA	5	NA	TRUE	NA	NA	NA	C	coding	1447	4344	161	4504	30.0	1	True	AATAAA	-11
PB.3099.5	chr13	+	6605	35	full-splice_match	PDS5B	ENST00000315596.14	7497	35	28	864	0	-864	multi-exon	FALSE	canonical	1	104646	junction_1	64889.18121133662	NA	4	NA	TRUE	NA	NA	NA	C	coding	1447	4344	159	4502	25.0	3	True	TATAAA	-16
PB.3099.6	chr13	+	5495	35	novel_in_catalog	PDS5B	novel	7497	35	NA	NA	1	144	combination_of_known_junctions	FALSE	canonical	1	104646	junction_1	67023.83295817126	NA	7	NA	TRUE	NA	NA	NA	C	coding	1445	4338	158	4495	55.0	4	True	NA	NA
PB.3099.7	chr13	+	1817	16	incomplete-splice_match	PDS5B	ENST00000450460.5	5246	34	-92	76119	1	8521	3prime_fragment	FALSE	canonical	1	104646	junction_1	28522.034377808483	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1659	158	1816	60.0	4	True	AAGAAA	-17
PB.60.6	chr1	-	3242	17	novel_not_in_catalog	DNAJC11	novel	3014	7	NA	NA	3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	226683.83422728753	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	896	1738	10.0	-11	True	AATAAA	-15
PB.11922.2	chr9	-	1582	1	full-splice_match	TMEM203	ENST00000343666.5	1557	1	-23	-2	-23	2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	136	411	248	658	25.0	-14	True	AATAAA	-25
PB.7938.5	chr3	-	3678	4	novel_in_catalog	VGLL4	novel	3725	6	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	674	junction_1	148809.42305363447	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	441	1424	25.0	101	False	AATAAA	-14
PB.172.22	chr1	-	5276	4	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	-11	0	intron_retention	FALSE	canonical	1	321080	junction_2	254313.88283554025	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-14	True	NA	NA
PB.10149.14	chr6	-	2833	5	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	-179	-2	intron_retention	FALSE	canonical	1	2051	junction_4	1092143.088910171	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	2	502	30.0	838	False	AATAAA	-16
PB.2016.1	chr11	+	2033	5	novel_in_catalog	AP000721.1	novel	559	3	NA	NA	11800	10064	intron_retention	FALSE	canonical	1	1513529	junction_2	329477.9267465235	NA	0	NA	TRUE	NA	NA	NA	A	coding	205	618	552	1169	0.0	-26	True	AATAAA	-16
PB.2016.2	chr11	+	1971	6	full-splice_match	OTUB1	ENST00000301453.7	2493	6	593	-71	0	62	multi-exon	FALSE	canonical	1	1513529	junction_2	299322.8889546538	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	526	1035	15.0	0	True	NA	NA
PB.2016.3	chr11	+	998	7	full-splice_match	OTUB1	ENST00000538426.5	1729	7	17	714	-16	-2	multi-exon	FALSE	canonical	1	1513529	junction_2	313263.92873976444	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	28	843	5.0	-16	True	ATTAAA	-17
PB.2016.4	chr11	+	1203	6	full-splice_match	OTUB1	ENST00000301453.7	2493	6	579	711	-14	-3	multi-exon	FALSE	canonical	1	1513529	junction_2	299322.8889546538	NA	1	NA	TRUE	NA	NA	NA	C	coding	169	510	540	1049	5.0	-14	True	ATTAAA	-16
PB.2016.5	chr11	+	1705	7	full-splice_match	OTUB1	ENST00000538426.5	1729	7	23	1	-10	-1	multi-exon	FALSE	canonical	1	1513529	junction_2	313263.92873976444	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	22	837	0.0	-10	True	AATAAA	-20
PB.812.16	chr1	-	3014	12	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	-9	276	intron_retention	FALSE	canonical	1	239164	junction_11	94117.87614387987	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	37	1485	65.0	-1	True	NA	NA
PB.2907.13	chr12	-	1869	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	18	-4	no_combination_of_known_junctions	FALSE	canonical	1	6515	junction_9	96717.73035922628	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	425	1756	10.0	-34	True	NA	NA
PB.2907.12	chr12	-	3309	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	31	-4	intron_retention	FALSE	canonical	1	139646	junction_10	68936.41826233795	NA	3	NA	TRUE	NA	NA	NA	C	coding	235	708	2489	3196	10.0	-21	True	NA	NA
PB.2907.11	chr12	-	2050	12	full-splice_match	BRAP	ENST00000419234.8	4026	12	37	1939	37	-3	multi-exon	FALSE	canonical	1	139646	junction_11	66286.15988934669	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	158	1936	15.0	-15	True	NA	NA
PB.2907.10	chr12	-	3402	12	full-splice_match	BRAP	ENST00000419234.8	4026	12	27	597	27	-597	multi-exon	FALSE	canonical	1	139646	junction_11	66286.15988934669	NA	8	NA	TRUE	NA	NA	NA	C	coding	592	1779	168	1946	15.0	-25	True	AATGAA	-39
PB.10102.14	chr6	-	3246	15	full-splice_match	RNGTT	ENST00000369475.7	1725	15	-208	-1313	-56	-1134	multi-exon	FALSE	canonical	1	11631	junction_4	44633.04494224348	NA	5	NA	TRUE	NA	NA	NA	C	coding	574	1725	209	1933	40.0	0	True	AGTAAA	-8
PB.10102.15	chr6	-	2604	16	full-splice_match	RNGTT	ENST00000369485.8	4553	16	91	1858	-69	589	multi-exon	FALSE	canonical	1	124765	junction_14	22194.7096965821	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	222	2015	65.0	-13	False	NA	NA
PB.2907.15	chr12	-	2525	6	novel_not_in_catalog	BRAP	novel	4026	12	NA	NA	6	-24336	any annotated donor/acceptor	FALSE	canonical	1	8733	junction_1	65576.76242877502	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	189	938	85.0	-46	True	NA	NA
PB.2907.14	chr12	-	1939	11	novel_in_catalog	BRAP	novel	4026	12	NA	NA	-20	-9	no_combination_of_known_junctions	FALSE	canonical	1	3765	junction_10	95316.06781146607	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	215	1831	20.0	-72	False	NA	NA
PB.10102.18	chr6	-	1734	15	incomplete-splice_match	RNGTT	ENST00000369485.8	4553	16	111	4097	-49	-1650	3prime_fragment	FALSE	canonical	1	124765	junction_13	19750.801703180743	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1533	202	1734	60.0	7	True	AAAACA	-29
PB.10149.11	chr6	-	2903	6	full-splice_match	CD164	ENST00000506649.5	778	6	42	-2167	42	1	multi-exon	FALSE	canonical	1	9423	junction_5	949103.0177137991	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1059	False	AATAAA	-19
PB.6434.10	chr2	+	5343	24	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	9	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	113543.18571309782	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	59	3004	20.0	9	True	AATAAA	-25
PB.10149.10	chr6	-	2931	5	novel_in_catalog	CD164	novel	4963	2	NA	NA	1	1	intron_retention	FALSE	canonical	1	6819	junction_4	1090871.4474246036	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	187	597	20.0	1180	False	AATAAA	-19
PB.1197.1	chr1	-	5152	1	full-splice_match	EXOC8	ENST00000366645.1	5100	1	-32	-20	-32	20	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	721	2166	152	2317	15.0	-1	True	AATAAA	-45
PB.7653.1	chr22	+	3867	8	novel_in_catalog	SMARCB1	novel	1730	9	NA	NA	-1	7	intron_retention	TRUE	canonical	1	636474	junction_2	394600.6766853948	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	2954	3535	30.0	1	True	AATAAA	-26
PB.4444.9	chr16	+	6578	47	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	163	junction_27	47128.271016129525	NA	3	NA	TRUE	NA	NA	NA	C	coding	1808	5427	161	5587	30.0	0	True	AATAAA	-15
PB.4444.8	chr16	+	6696	48	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	11890	junction_26	43248.05710429678	NA	1	NA	TRUE	NA	NA	NA	C	coding	1837	5514	187	5700	25.0	-4	True	AATAAA	-20
PB.6129.7	chr19	-	2482	12	novel_not_in_catalog	GYS1	novel	3574	16	NA	NA	0	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	170389.7688245472	NA	1	1	TRUE	NA	NA	NA	B	coding	370	1113	217	1329	30.0	-1	True	AATACA	-10
PB.1197.4	chr1	-	3269	1	full-splice_match	EXOC8	ENST00000366645.1	5100	1	0	1831	0	-1831	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	721	2166	120	2285	20.0	-1	True	AATAAA	-20
PB.6129.5	chr19	-	3581	16	novel_not_in_catalog	GYS1	novel	3574	16	NA	NA	-15	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	163188.60531062415	NA	41	3	TRUE	NA	NA	NA	B	coding	405	1218	214	1431	30.0	229	False	AATACA	-10
PB.4444.3	chr16	+	4527	33	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	22	3	combination_of_known_junctions	FALSE	canonical	1	29227	junction_32	44528.45341670418	NA	1	NA	TRUE	NA	NA	NA	C	coding	1428	4287	226	4512	20.0	20	True	AATAAA	-20
PB.4444.2	chr16	+	6731	48	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	1406	junction_32	46992.574680966565	NA	3	NA	TRUE	NA	NA	NA	C	coding	1837	5514	222	5735	25.0	2	True	AATAAA	-20
PB.4444.1	chr16	+	4532	33	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	1	29227	junction_32	44335.02248098729	NA	0	NA	TRUE	NA	NA	NA	C	coding	1427	4284	239	4522	10.0	-2	True	AATAAA	-15
PB.10149.12	chr6	-	3063	7	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	29	junction_3	1090807.4161222654	NA	2	NA	TRUE	NA	NA	NA	C	coding	211	636	97	732	30.0	-8	True	AATAAA	-16
PB.4444.7	chr16	+	2328	2	full-splice_match	NLRC5	ENST00000535658.1	527	2	-37	-1764	-6	446	multi-exon	FALSE	canonical	1	1793	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-6	True	ATTAAA	-20
PB.4444.6	chr16	+	6719	48	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	11890	junction_26	48086.78514216025	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	2618	5728	30.0	-6	True	AATAAA	-15
PB.4444.5	chr16	+	6777	49	novel_in_catalog	NLRC5	novel	4777	25	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	65445	junction_1	40808.19896623784	NA	2	NA	TRUE	NA	NA	NA	C	coding	1865	5598	189	5786	30.0	-6	True	AATAAA	-15
PB.4444.4	chr16	+	4384	32	novel_not_in_catalog	NLRC5	novel	4777	25	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	49066.36076477725	NA	9	1	TRUE	NA	NA	NA	C	coding	1220	3663	168	3830	15.0	-7	True	AATAAA	-16
PB.2522.1	chr12	+	1836	8	full-splice_match	MRPS35	ENST00000081029.7	1888	8	52	0	3	0	multi-exon	FALSE	canonical	1	638498	junction_1	119713.75711611904	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	20	991	25.0	-7	True	AATAAA	-17
PB.2522.2	chr12	+	1069	8	full-splice_match	MRPS35	ENST00000081029.7	1888	8	59	760	-3	-2	multi-exon	FALSE	canonical	1	638498	junction_1	119713.75711611904	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	13	984	35.0	0	True	TATAAA	-13
PB.2522.3	chr12	+	3244	1	novel_in_catalog	MRPS35	novel	1888	8	NA	NA	-3	-21425	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	149	450	13	462	95.0	0	True	NA	NA
PB.5694.10	chr19	-	5273	41	full-splice_match	DNMT1	ENST00000359526.8	5206	41	126	-193	-19	-1	multi-exon	FALSE	canonical	1	263657	junction_36	356043.3191524277	NA	0	NA	TRUE	NA	NA	NA	C	coding	1632	4899	55	4953	10.0	-31	True	AATAAA	-16
PB.5694.13	chr19	-	1044	13	novel_not_in_catalog	DNMT1	novel	5215	41	NA	NA	-17	-186	any annotated donor/acceptor	FALSE	canonical	1	48655	junction_3	547771.1254102784	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	990	53	1042	50.0	-29	True	NA	NA
PB.5694.12	chr19	-	2211	23	incomplete-splice_match	DNMT1	ENST00000340748.8	5408	40	170	18124	-31	-1522	3prime_fragment	FALSE	canonical	1	309860	junction_22	416651.621359656	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2145	67	2211	55.0	-43	True	NA	NA
PB.8461.32	chr3	-	2890	8	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-7	-1239	any annotated donor/acceptor	FALSE	canonical	1	1370	junction_1	178852.70053930994	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	272	1522	80.0	-8	True	AAAAAG	-18
PB.3815.1	chr15	-	2289	10	novel_not_in_catalog	TGM5	novel	2756	13	NA	NA	-439	5	any annotated donor/acceptor	FALSE	canonical	1	430	junction_9	10904.500151568414	NA	0	NA	TRUE	NA	NA	NA	B	coding	493	1482	207	1688	20.0	-502	False	AATAAA	-23
PB.3815.2	chr15	-	2119	9	novel_not_in_catalog	TGM5	novel	2756	13	NA	NA	64	0	any annotated donor/acceptor	FALSE	canonical	1	795	junction_2	11411.736611927214	NA	0	NA	TRUE	NA	NA	NA	B	coding	478	1437	87	1523	15.0	1	True	AATAAA	-18
PB.1520.3	chr10	+	3099	1	novel_in_catalog	STAMBPL1	novel	2532	11	NA	NA	4	469	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-271	False	NA	NA
PB.1520.2	chr10	+	2294	13	novel_not_in_catalog	STAMBPL1	novel	2532	11	NA	NA	-29	-6	any annotated donor/acceptor	FALSE	canonical	1	2381	junction_2	81285.00075403416	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	727	2037	35.0	-304	False	AATAAA	-10
PB.1520.1	chr10	+	1818	11	full-splice_match	STAMBPL1	ENST00000371926.7	2532	11	708	6	218	-6	multi-exon	FALSE	canonical	1	104491	junction_1	37682.54089628246	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	251	1561	35.0	-57	True	AATAAA	-10
PB.9453.7	chr5	-	2363	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	54	2232	-15	1070	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	228	1157	50.0	-18	True	NA	NA
PB.1520.4	chr10	+	2177	12	novel_in_catalog	STAMBPL1	novel	2532	11	NA	NA	24	-2	no_combination_of_known_junctions	FALSE	canonical	1	1602	junction_1	75105.14513479758	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	606	1916	30.0	1	True	AATAAA	-14
PB.10434.18	chr7	+	2766	12	novel_in_catalog	GPNMB	novel	793	6	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	3162	junction_7	299636.3555496744	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	82	1884	30.0	2	True	AATAAA	-15
PB.10434.19	chr7	+	3098	10	incomplete-splice_match	GPNMB	ENST00000258733.8	2862	11	212	2	1	-1	intron_retention	FALSE	canonical	1	499001	junction_6	132767.28333087833	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	84	1610	30.0	0	True	AATAAA	-15
PB.8532.9	chr3	+	2756	18	full-splice_match	MFN1	ENST00000471841.5	5224	18	39	2429	-4	6	multi-exon	FALSE	canonical	1	71715	junction_5	97209.49252108876	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	88	2313	15.0	-4	True	AGTAAA	-26
PB.8532.8	chr3	+	4451	17	novel_in_catalog	MFN1	novel	5224	18	NA	NA	-5	0	intron_retention	FALSE	canonical	1	71715	junction_5	99952.0991919184	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	89	1249	25.0	-5	True	AGTAAA	-20
PB.10434.12	chr7	+	1606	4	full-splice_match	GPNMB	ENST00000409458.3	1673	4	66	1	1	-1	multi-exon	FALSE	canonical	1	584985	junction_1	37466.391988910094	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	84	704	10.0	0	True	AATAAA	-25
PB.10434.13	chr7	+	2156	6	incomplete-splice_match	GPNMB	ENST00000647578.1	2751	12	28	13269	0	1774	intron_retention	FALSE	canonical	1	584985	junction_1	133090.72530060087	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	85	1119	40.0	-1	True	AATAAA	-26
PB.10434.10	chr7	+	2518	10	novel_in_catalog	GPNMB	novel	793	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4697	junction_3	307979.2278732969	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	91	1635	30.0	-7	True	AATAAA	-16
PB.10434.11	chr7	+	1733	11	novel_in_catalog	GPNMB	novel	793	6	NA	NA	0	-311	no_combination_of_known_junctions	FALSE	canonical	1	3162	junction_7	305570.4135727967	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1641	91	1731	15.0	-7	True	NA	NA
PB.10434.16	chr7	+	1774	11	full-splice_match	GPNMB	ENST00000381990.6	2763	11	76	913	-1	-58	multi-exon	FALSE	canonical	1	119300	junction_6	215359.04005824786	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1689	86	1774	60.0	-2	True	NA	NA
PB.10434.17	chr7	+	1690	11	incomplete-splice_match	GPNMB	ENST00000647578.1	2751	12	27	1484	-1	-313	3prime_fragment	FALSE	canonical	1	9641	junction_7	304349.68452889845	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1605	86	1690	25.0	-2	True	NA	NA
PB.10434.14	chr7	+	1643	10	incomplete-splice_match	GPNMB	ENST00000381990.6	2763	11	75	1495	-2	-313	3prime_fragment	FALSE	canonical	1	119300	junction_6	220748.4453136535	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1557	87	1643	25.0	-3	True	NA	NA
PB.10434.15	chr7	+	2507	10	novel_in_catalog	GPNMB	novel	793	6	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	210	junction_2	264875.8081600591	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	86	1624	30.0	-2	True	AATAAA	-16
PB.8463.2	chr3	+	1575	11	novel_not_in_catalog	RNF13	novel	2843	10	NA	NA	-45	-20	any annotated donor/acceptor	FALSE	canonical	1	217	junction_1	150751.07452751373	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	180	1325	90.0	13	True	AATGAA	-10
PB.8463.3	chr3	+	2234	10	novel_not_in_catalog	RNF13	novel	2843	10	NA	NA	-43	-20	any annotated donor/acceptor	FALSE	canonical	1	6550	junction_1	143256.01483547981	NA	3	NA	TRUE	NA	NA	NA	C	coding	381	1146	839	1984	90.0	15	True	AATGAA	-10
PB.8463.1	chr3	+	2788	10	novel_in_catalog	RNF13	novel	2843	10	NA	NA	-47	-20	intron_retention	FALSE	canonical	1	29282	junction_1	146964.3279245715	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	1996	2538	90.0	11	True	AATGAA	-10
PB.8463.6	chr3	+	3518	10	novel_in_catalog	RNF13	novel	2843	10	NA	NA	-5	0	intron_retention	FALSE	canonical	1	29282	junction_1	146964.3279245715	NA	1	NA	TRUE	NA	NA	NA	C	coding	180	543	1954	2496	35.0	-36	True	AATAAA	-16
PB.8463.7	chr3	+	2315	10	full-splice_match	RNF13	ENST00000392894.7	2843	10	522	6	2	-6	multi-exon	FALSE	canonical	1	141018	junction_5	126126.71566452917	NA	1	NA	TRUE	NA	NA	NA	C	coding	381	1146	141	1286	25.0	15	True	AATAAA	-23
PB.4664.9	chr17	+	2755	11	novel_not_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-115	702	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	339288.4919693122	NA	5	1	TRUE	NA	NA	NA	C	coding	410	1233	275	1507	30.0	-23	True	AATAAA	-26
PB.4664.8	chr17	+	2283	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-117	3331	-117	-64	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	569	1801	40.0	-25	True	AATAAA	-20
PB.4664.7	chr17	+	5458	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-117	156	-117	-156	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	569	1801	60.0	-25	True	NA	NA
PB.4664.6	chr17	+	5530	10	novel_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-117	1	intron_retention	FALSE	canonical	1	27453	junction_2	322003.22475679923	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	679	1716	10.0	-25	True	ATTAAA	-16
PB.4664.5	chr17	+	3297	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-117	2317	-117	950	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	569	1801	15.0	-25	True	AATAAA	-22
PB.4664.4	chr17	+	1936	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-100	3661	-100	44	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	552	1784	25.0	-8	True	ATTAAA	-15
PB.4664.3	chr17	+	5740	12	novel_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-122	-7	intron_retention	FALSE	canonical	1	2985	junction_1	360626.0552116564	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	702	1934	35.0	-1815	False	ATTAAA	-41
PB.4664.2	chr17	+	1832	10	novel_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-123	2	combination_of_known_junctions	FALSE	canonical	1	27453	junction_2	322003.22475679923	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	685	1722	25.0	-1816	False	AATAAA	-22
PB.4664.1	chr17	+	3874	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-128	1751	-128	-636	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	580	1812	25.0	3	True	TATAAA	-23
PB.12192.20	chrX	+	3997	3	full-splice_match	BHLHB9	ENST00000361229.8	3974	3	-29	6	9	-3	multi-exon	FALSE	canonical	1	7564	junction_2	14630.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	558	2201	35.0	-8	True	NA	NA
PB.1187.9	chr1	-	3714	26	full-splice_match	NUP133	ENST00000261396.5	5207	26	12	1481	-3	38	multi-exon	FALSE	canonical	1	234689	junction_20	69783.50246648272	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	81	3551	15.0	-3	True	TATAAA	-18
PB.1187.2	chr1	-	4473	26	full-splice_match	NUP133	ENST00000261396.5	5207	26	0	734	0	-734	multi-exon	FALSE	canonical	1	234689	junction_20	69783.50246648272	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	93	3563	15.0	-15	True	AATAAA	-16
PB.1187.3	chr1	-	3986	26	full-splice_match	NUP133	ENST00000261396.5	5207	26	182	1039	167	480	multi-exon	FALSE	canonical	1	234689	junction_20	69783.50246648272	NA	1	NA	TRUE	NA	NA	NA	C	coding	1090	3273	109	3381	35.0	167	False	AATAAA	-17
PB.1187.1	chr1	-	5208	26	full-splice_match	NUP133	ENST00000261396.5	5207	26	0	-1	0	1	multi-exon	FALSE	canonical	1	234689	junction_20	69783.50246648272	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	93	3563	25.0	-15	True	AGTAAA	-19
PB.6135.1	chr19	-	2220	14	novel_in_catalog	TEAD2	novel	2191	13	NA	NA	5	1	no_combination_of_known_junctions	FALSE	canonical	1	13070	junction_5	148127.51113457308	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	37	723	35.0	11	True	GATAAA	-13
PB.6135.2	chr19	-	2126	12	full-splice_match	TEAD2	ENST00000311227.6	2164	12	33	5	-17	0	multi-exon	FALSE	canonical	1	24511	junction_11	116000.09431764475	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	59	1402	40.0	-11	True	GATAAA	-12
PB.6135.3	chr19	-	2068	12	novel_not_in_catalog	TEAD2	novel	2191	13	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	24511	junction_11	133513.44379728797	NA	2	1	TRUE	NA	NA	NA	C	coding	434	1305	40	1344	40.0	8	True	GATAAA	-12
PB.10411.17	chr7	-	3300	14	full-splice_match	ETV1	ENST00000430479.5	6740	14	287	3153	7	0	multi-exon	FALSE	non_canonical	0	0	junction_4	73410.51829268064	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	382	1815	15.0	6	True	TTTAAA	-6
PB.4479.1	chr16	+	3904	13	full-splice_match	CES3	ENST00000303334.8	3834	13	-18	-52	-18	0	multi-exon	FALSE	canonical	1	14164	junction_3	10261.998671947662	NA	2	NA	TRUE	NA	NA	NA	A	coding	571	1716	90	1805	15.0	-15	True	NA	NA
PB.6850.39	chr2	-	1881	5	incomplete-splice_match	WIPF1	ENST00000409891.5	2568	7	-40	5006	-1	2	3prime_fragment	FALSE	canonical	1	269392	junction_4	159368.29147822192	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	244	1455	10.0	-2	True	ATTAAA	-22
PB.6850.36	chr2	-	1522	8	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	2	32	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	236494.45247702568	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	125	1147	5.0	1	True	ATTAAA	-26
PB.6850.37	chr2	-	1917	9	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	0	23	any annotated donor/acceptor	FALSE	canonical	1	3044	junction_1	225280.64191438947	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	243	1829	0.0	-1	True	ATTAAA	-17
PB.6850.34	chr2	-	2015	8	full-splice_match	WIPF1	ENST00000392547.6	4587	8	-26	2598	0	34	multi-exon	FALSE	canonical	1	113671	junction_7	205514.79251153974	NA	2	NA	TRUE	NA	NA	NA	C	coding	503	1512	127	1638	5.0	-1	True	ATTAAA	-28
PB.10411.15	chr7	-	3150	12	novel_not_in_catalog	ETV1	novel	6740	14	NA	NA	-12	-22	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	75261.98928086074	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	43	1461	90.0	-13	True	TTTAAA	-12
PB.6850.30	chr2	-	3041	7	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	-1	-113	intron_retention	FALSE	canonical	1	43	junction_4	233181.13036126137	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	244	1377	65.0	-2	True	AAGAAA	-8
PB.6850.31	chr2	-	2830	8	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	1	-113	intron_retention	FALSE	non_canonical	0	0	junction_4	236494.45247702568	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	126	1166	65.0	0	True	AAGAAA	-8
PB.11052.1	chr8	-	1669	9	full-splice_match	CLU	ENST00000316403.14	3080	9	331	1080	0	-1	multi-exon	TRUE	canonical	1	3968370	junction_8	1969313.0796876706	NA	0	NA	TRUE	NA	NA	NA	A	coding	448	1347	79	1425	10.0	-1	True	AATAAA	-17
PB.10411.14	chr7	-	3272	12	full-splice_match	ETV1	ENST00000405358.8	4181	12	0	909	0	-22	multi-exon	FALSE	non_canonical	0	0	junction_4	75271.0863121529	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	108	1583	90.0	-1	True	TTTAAA	-12
PB.9042.1	chr4	+	3043	13	full-splice_match	TMEM144	ENST00000296529.10	3442	13	274	125	-32	-1	multi-exon	FALSE	canonical	1	54291	junction_5	27109.82339177689	NA	4	NA	TRUE	NA	NA	NA	C	coding	345	1038	247	1284	35.0	-2	True	AATAAA	-17
PB.11742.2	chr9	+	2698	14	novel_in_catalog	ZNF618	novel	3018	15	NA	NA	6	-38	no_combination_of_known_junctions	TRUE	canonical	1	10380	junction_10	23964.880318385825	NA	1	1	TRUE	NA	NA	NA	B	coding	862	2589	94	2682	85.0	-21	True	NA	NA
PB.9831.1	chr6	-	1418	1	full-splice_match	ZDHHC20P1	ENST00000435787.1	423	1	-391	-604	-391	604	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-20
PB.172.21	chr1	-	4908	6	novel_in_catalog	SRSF10	novel	3487	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	321080	junction_4	251434.52601057003	NA	2	NA	TRUE	NA	NA	NA	C	coding	167	504	3642	4145	80.0	-2	True	NA	NA
PB.10756.1	chr7	+	2170	3	antisense	novelGene_RASA4DP_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	54.0	NA	2	1	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-7516	False	AATAAA	-21
PB.10411.12	chr7	-	3469	14	novel_not_in_catalog	ETV1	novel	6740	14	NA	NA	-18	-22	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	82455.2334387805	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	417	1649	90.0	1	True	TTTAAA	-12
PB.12235.1	chrX	+	1253	4	full-splice_match	SLC25A5	ENST00000317881.8	1274	4	45	-24	23	24	multi-exon	FALSE	canonical	1	1813846	junction_1	1708287.5895681812	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	72	968	40.0	0	True	AATAAA	-40
PB.12235.2	chrX	+	2480	2	full-splice_match	SLC25A5	ENST00000463551.1	433	2	-1817	-230	23	-8	multi-exon	FALSE	canonical	1	5997252	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	1865	2227	40.0	0	True	AATAAA	-8
PB.10411.11	chr7	-	3328	13	incomplete-splice_match	ETV1	ENST00000430479.5	6740	14	561	2949	254	-22	5prime_fragment	FALSE	non_canonical	0	0	junction_4	67573.89837363035	NA	1	NA	TRUE	NA	NA	NA	C	coding	477	1434	206	1639	90.0	-1	True	TTTAAA	-12
PB.9005.9	chr4	+	2593	18	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	225	11944	225	1186	3prime_fragment	FALSE	canonical	1	608699	junction_1	156231.99612361152	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2184	409	2592	45.0	-14	True	NA	NA
PB.4010.8	chr15	+	2570	11	full-splice_match	IDH3A	ENST00000558554.5	1595	11	5	-980	3	-2	multi-exon	FALSE	canonical	1	947	junction_4	236945.03765168833	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	40	1035	15.0	-12	True	AATAAA	-14
PB.4010.9	chr15	+	1564	11	full-splice_match	IDH3A	ENST00000299518.6	4128	11	56	2508	0	-119	multi-exon	FALSE	canonical	1	504234	junction_1	104675.50327636355	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	28	1128	45.0	0	True	AATAAA	-22
PB.3662.6	chr14	+	2093	3	novel_in_catalog	YY1	novel	636	2	NA	NA	180	118	no_combination_of_known_junctions	FALSE	canonical	1	1445	junction_2	329769.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	326	981	81	1061	30.0	21	True	AATAAA	-19
PB.8548.2	chr3	+	3940	2	full-splice_match	B3GNT5	ENST00000493370.1	561	2	230	-3609	-42	-4	multi-exon	FALSE	canonical	1	951	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	478	1488	35.0	-4898	False	AATAAA	-17
PB.3662.1	chr14	+	2340	5	full-splice_match	YY1	ENST00000262238.8	6697	5	153	4204	153	118	multi-exon	FALSE	canonical	1	660983	junction_1	245384.7289079946	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	108	1352	30.0	-6	True	AATAAA	-19
PB.3662.2	chr14	+	4374	5	full-splice_match	YY1	ENST00000262238.8	6697	5	591	1732	-178	-1732	multi-exon	FALSE	canonical	1	660983	junction_1	245384.7289079946	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	336	914	95.0	-1098	False	NA	NA
PB.3662.3	chr14	+	2232	5	full-splice_match	YY1	ENST00000262238.8	6697	5	154	4311	154	11	multi-exon	FALSE	canonical	1	660983	junction_1	245384.7289079946	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	107	1351	45.0	-5	True	AATAAA	-30
PB.4010.1	chr15	+	2952	12	full-splice_match	IDH3A	ENST00000560667.5	2110	12	-16	-826	-16	-1	multi-exon	FALSE	canonical	1	31746	junction_2	280383.45077933115	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	466	1416	15.0	-33	False	AATAAA	-15
PB.4010.2	chr15	+	4078	11	full-splice_match	IDH3A	ENST00000299518.6	4128	11	40	10	1	-10	multi-exon	FALSE	canonical	1	504234	junction_1	104675.50327636355	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	44	1144	45.0	-16	True	AATAAA	-15
PB.4010.3	chr15	+	1740	11	full-splice_match	IDH3A	ENST00000299518.6	4128	11	41	2347	0	42	multi-exon	FALSE	canonical	1	504234	junction_1	104675.50327636355	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	43	1143	60.0	-15	True	AATAAA	-13
PB.4010.4	chr15	+	1387	11	full-splice_match	IDH3A	ENST00000299518.6	4128	11	41	2700	0	-9	multi-exon	FALSE	canonical	1	504234	junction_1	104675.50327636355	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	43	1143	30.0	-15	True	NA	NA
PB.4010.5	chr15	+	2679	11	full-splice_match	IDH3A	ENST00000299518.6	4128	11	41	1408	0	-1	multi-exon	FALSE	canonical	1	504234	junction_1	104675.50327636355	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	43	1143	15.0	-15	True	AATAAA	-15
PB.4010.6	chr15	+	2655	11	novel_in_catalog	IDH3A	novel	573	4	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	16391	junction_2	233976.98552344844	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	43	1119	15.0	-15	True	AATAAA	-15
PB.4010.7	chr15	+	4329	12	full-splice_match	IDH3A	ENST00000560667.5	2110	12	5	-2224	3	-10	multi-exon	FALSE	canonical	1	31746	junction_2	280383.45077933115	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	445	1395	45.0	-12	True	AATAAA	-15
PB.6501.5	chr2	+	2151	11	full-splice_match	UGP2	ENST00000467648.6	2057	11	13	-107	11	0	multi-exon	FALSE	canonical	1	49060	junction_1	613774.9257026064	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	327	1820	30.0	-5131	False	AATAAA	-11
PB.44.2	chr1	-	2442	7	novel_not_in_catalog	LRRC47	novel	4310	7	NA	NA	0	915	any annotated donor/acceptor	FALSE	canonical	1	358	junction_6	217959.75798737863	NA	3	1	TRUE	NA	NA	NA	C	coding	240	723	852	1574	25.0	-11	True	NA	NA
PB.7461.1	chr21	-	4708	4	full-splice_match	NRIP1	ENST00000318948.6	7556	4	-107	2955	22	-2955	multi-exon	FALSE	canonical	1	71188	junction_3	22755.41548730763	NA	0	NA	TRUE	NA	NA	NA	A	coding	1158	3477	706	4182	75.0	1023	False	AATAAA	-37
PB.6501.7	chr2	+	2146	10	full-splice_match	UGP2	ENST00000337130.9	2338	10	188	4	-4	0	multi-exon	FALSE	canonical	1	465556	junction_1	381697.2629632735	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	289	1815	30.0	2	True	AATAAA	-11
PB.951.5	chr1	-	3913	3	full-splice_match	KIAA0040	ENST00000545251.6	2485	3	-34	-1394	5	-572	multi-exon	FALSE	canonical	1	25254	junction_2	89240.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	459	758	60.0	-13	True	AAGAAA	-10
PB.1952.4	chr11	+	6033	19	full-splice_match	CTNND1	ENST00000534579.5	6024	19	-8	-1	-4	1	multi-exon	FALSE	canonical	1	28423	junction_2	335066.3117534938	NA	1	NA	TRUE	NA	NA	NA	C	coding	879	2640	523	3162	10.0	-14	True	ATTAAA	-19
PB.1952.5	chr11	+	6061	18	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49195	27593	no_combination_of_known_junctions	FALSE	canonical	1	38372	junction_3	341365.70169171074	NA	3	NA	TRUE	NA	NA	NA	B	coding	909	2730	461	3190	10.0	-7	True	ATTAAA	-19
PB.1952.6	chr11	+	4918	16	full-splice_match	CTNND1	ENST00000532245.5	5655	16	5	732	1	506	multi-exon	FALSE	canonical	1	54533	junction_1	285687.79669231	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	282	2780	10.0	-5	True	AATAAA	-16
PB.1952.7	chr11	+	5462	20	novel_not_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49199	26859	any annotated donor/acceptor	FALSE	canonical	1	1162	junction_2	368911.1647488444	NA	5	1	TRUE	NA	NA	NA	B	coding	933	2802	524	3325	10.0	-3	True	AATAAA	-15
PB.1952.1	chr11	+	5236	17	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49167	26859	no_combination_of_known_junctions	FALSE	canonical	1	28130	junction_1	344920.7554341287	NA	0	NA	TRUE	NA	NA	NA	B	coding	909	2730	370	3099	10.0	-2054	False	AATAAA	-15
PB.1952.2	chr11	+	1837	1	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49167	-27978	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-2054	False	NA	NA
PB.1952.3	chr11	+	5243	18	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49280	26860	no_combination_of_known_junctions	FALSE	canonical	1	38372	junction_3	341365.70169171074	NA	0	NA	TRUE	NA	NA	NA	B	coding	909	2730	376	3105	10.0	-1941	False	AATAAA	-16
PB.6321.1	chr2	-	4160	3	novel_in_catalog	AC064875.1	novel	1942	6	NA	NA	3	422	intron_retention	FALSE	canonical	1	2415	junction_1	939.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-11	True	AATAAA	-26
PB.6321.3	chr2	-	1840	5	novel_in_catalog	AC064875.1	novel	1942	6	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	1850	junction_3	994.6005479588275	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-10	True	AATAAA	-16
PB.6321.2	chr2	-	1662	4	novel_in_catalog	AC064875.1	novel	1942	6	NA	NA	4	7	no_combination_of_known_junctions	FALSE	canonical	1	2240	junction_2	929.7659203620375	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-10	True	AATAAA	-23
PB.1952.8	chr11	+	5631	16	full-splice_match	CTNND1	ENST00000532245.5	5655	16	25	-1	4	1	multi-exon	FALSE	canonical	1	54533	junction_1	285687.79669231	NA	2	NA	TRUE	NA	NA	NA	C	coding	832	2499	262	2760	10.0	15	True	ATTAAA	-19
PB.1952.9	chr11	+	5352	19	novel_not_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	49217	26859	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	358258.4229212936	NA	18	NA	TRUE	NA	NA	NA	B	coding	879	2640	576	3215	10.0	15	True	AATAAA	-15
PB.6321.7	chr2	-	2338	4	novel_not_in_catalog	AC064875.1	novel	1942	6	NA	NA	4	10960	any annotated donor/acceptor	FALSE	canonical	1	698	junction_1	1473.012634780239	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-10	True	NA	NA
PB.8080.20	chr3	-	5662	29	novel_not_in_catalog	SMARCC1	novel	6375	28	NA	NA	18	-752	any annotated donor/acceptor	FALSE	canonical	1	2340	junction_19	232386.2677424136	NA	1	NA	TRUE	NA	NA	NA	C	coding	1136	3411	67	3477	25.0	29	True	NA	NA
PB.6736.24	chr2	+	6348	41	novel_not_in_catalog	UGGT1	novel	586	5	NA	NA	7	-28	any annotated donor/acceptor	FALSE	canonical	1	14808	junction_1	104526.46215426741	NA	3	NA	TRUE	NA	NA	NA	C	coding	1549	4650	41	4690	85.0	3	True	NA	NA
PB.1051.40	chr1	+	4826	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	3	439	intron_retention	FALSE	canonical	1	19678	junction_6	187669.7920092695	NA	3	NA	TRUE	NA	NA	NA	C	coding	810	2433	1924	4356	25.0	40	False	ACTAAA	-15
PB.4846.11	chr17	-	1593	11	full-splice_match	POLDIP2	ENST00000540200.5	2121	11	-63	591	-63	-107	multi-exon	FALSE	canonical	1	851706	junction_10	244690.96006328065	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	138	1244	15.0	-1	True	AGTAAA	-39
PB.4846.10	chr17	-	2349	10	novel_in_catalog	POLDIP2	novel	2121	11	NA	NA	-14	-7	intron_retention	FALSE	canonical	1	851706	junction_9	232555.9355791873	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	89	610	10.0	9894	False	ATTAAA	-15
PB.7106.1	chr2	-	3281	7	novel_in_catalog	MTERF4	novel	3993	5	NA	NA	-1	-495	intron_retention	FALSE	canonical	1	55186	junction_1	69708.66738792243	NA	3	NA	TRUE	NA	NA	NA	C	coding	381	1146	38	1183	50.0	-24	True	NA	NA
PB.704.1	chr1	+	2930	11	incomplete-splice_match	NBPF19	ENST00000621744.4	14425	97	156037	106	46694	-106	5prime_fragment	FALSE	canonical	0	0	junction_1	110.44709140579484	NA	19	2	TRUE	NA	NA	NA	A	coding	269	810	604	1413	15.0	NA	False	ATTAAA	-15
PB.11742.7	chr9	+	2722	14	novel_not_in_catalog	ZNF618	novel	3018	15	NA	NA	-30	-39	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	28557.822801463055	NA	0	NA	TRUE	NA	NA	NA	B	coding	881	2646	62	2707	80.0	11	True	NA	NA
PB.6736.21	chr2	+	7682	41	full-splice_match	UGGT1	ENST00000376723.7	6682	41	81	-1081	-19	1081	multi-exon	FALSE	canonical	1	39395	junction_1	102816.01114694819	NA	2	NA	TRUE	NA	NA	NA	C	coding	1531	4596	320	4915	35.0	-55	False	TATAAA	-20
PB.10285.2	chr6	-	2094	13	full-splice_match	RMND1	ENST00000644711.1	1914	13	-16	-164	4	-5	multi-exon	FALSE	canonical	1	7582	junction_3	95550.7515707912	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	141	1475	80.0	-16	True	NA	NA
PB.6736.22	chr2	+	7474	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-15	1082	combination_of_known_junctions	FALSE	canonical	1	62539	junction_20	104109.59194248136	NA	29	1	TRUE	NA	NA	NA	C	coding	1547	4644	63	4706	30.0	-51	False	TATAAA	-21
PB.6743.11	chr2	+	1764	8	novel_in_catalog	PLEKHB2	novel	2277	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	481816	junction_6	179111.77086617262	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	72	740	80.0	0	True	NA	NA
PB.6743.10	chr2	+	2583	3	novel_not_in_catalog	PLEKHB2	novel	2277	8	NA	NA	-1	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	7348.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	ATTAAA	-11
PB.583.16	chr1	+	3682	6	full-splice_match	PRPF38B	ENST00000370025.8	3693	6	6	5	2	-5	multi-exon	FALSE	canonical	1	311749	junction_4	144899.2900043337	NA	3	NA	TRUE	NA	NA	NA	C	coding	546	1641	264	1904	35.0	2	True	ATTAAA	-12
PB.6736.23	chr2	+	6345	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	4	-28	combination_of_known_junctions	FALSE	canonical	1	62539	junction_20	104109.59194248136	NA	3	NA	TRUE	NA	NA	NA	C	coding	1547	4644	44	4687	85.0	0	True	NA	NA
PB.11742.6	chr9	+	2909	15	novel_in_catalog	ZNF618	novel	3018	15	NA	NA	-33	-38	combination_of_known_junctions	FALSE	canonical	1	14443	junction_11	23239.80724919189	NA	0	NA	TRUE	NA	NA	NA	B	coding	942	2829	65	2893	85.0	8	True	NA	NA
PB.2638.6	chr12	+	2623	7	novel_in_catalog	TARBP2	novel	1855	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	41390	junction_1	110154.15185850539	NA	0	NA	TRUE	NA	NA	NA	B	coding	245	738	1604	2341	5.0	1	True	AATAAA	-23
PB.6945.10	chr2	-	3413	16	full-splice_match	TRAK2	ENST00000332624.7	6510	16	84	3013	5	-3013	multi-exon	FALSE	canonical	1	117443	junction_15	57181.09746698545	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	346	3090	25.0	-41	True	AATAAA	-30
PB.2638.4	chr12	+	2556	6	novel_in_catalog	TARBP2	novel	1855	9	NA	NA	4	-2	intron_retention	FALSE	canonical	1	74690	junction_4	104619.13164350008	NA	0	NA	TRUE	NA	NA	NA	B	coding	109	330	132	461	10.0	-25	True	AATAAA	-22
PB.2638.5	chr12	+	2752	7	novel_in_catalog	TARBP2	novel	1855	9	NA	NA	-12	-3	intron_retention	FALSE	canonical	1	13328	junction_1	143571.6619559917	NA	0	NA	TRUE	NA	NA	NA	B	coding	173	522	1951	2472	10.0	-13	True	AATAAA	-21
PB.2638.2	chr12	+	1432	8	novel_in_catalog	TARBP2	novel	1855	9	NA	NA	-44	-3	combination_of_known_junctions	FALSE	canonical	1	74690	junction_6	103296.38313955763	NA	0	NA	TRUE	NA	NA	NA	B	coding	256	771	180	950	10.0	-356	False	AATAAA	-21
PB.2638.3	chr12	+	1590	9	novel_in_catalog	TARBP2	novel	1855	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	10285	junction_3	109819.2547322076	NA	9	1	TRUE	NA	NA	NA	B	coding	222	669	647	1315	15.0	-25	True	AATAAA	-16
PB.860.21	chr1	+	1858	7	full-splice_match	SLAMF7	ENST00000368043.7	2689	7	-17	848	1	-841	multi-exon	FALSE	canonical	1	206654	junction_1	123244.62548074414	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	55	1062	45.0	1	True	NA	NA
PB.2638.1	chr12	+	2763	7	novel_in_catalog	TARBP2	novel	1855	9	NA	NA	-75	-2	intron_retention	FALSE	canonical	1	231704	junction_1	40968.7066023162	NA	0	NA	TRUE	NA	NA	NA	B	coding	245	738	1745	2482	10.0	-387	False	AATAAA	-22
PB.11082.1	chr8	-	1725	1	novel_in_catalog	TTI2	novel	1671	6	NA	NA	16409	6857	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	3960	False	NA	NA
PB.860.29	chr1	+	2394	6	full-splice_match	SLAMF7	ENST00000621377.4	2608	6	216	-2	5	2	multi-exon	FALSE	canonical	1	13404	junction_2	226875.02016572913	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	30	755	40.0	0	True	NA	NA
PB.7088.9	chr2	+	2142	14	novel_in_catalog	MLPH	novel	744	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	46155	junction_5	201594.18457714858	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	212	1738	20.0	0	True	AAAAAG	-23
PB.11472.11	chr9	-	1718	14	incomplete-splice_match	HAUS6	ENST00000380502.7	6536	17	214	10030	214	-4409	3prime_fragment	FALSE	canonical	1	52	junction_4	68225.91587161516	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1332	387	1718	70.0	-2	True	NA	NA
PB.6127.1	chr19	+	1389	5	full-splice_match	BAX	ENST00000293288.12	1358	5	-32	1	0	-1	multi-exon	FALSE	canonical	1	414464	junction_1	917442.335703449	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	33	689	20.0	7	True	AATAAA	-16
PB.7595.8	chr22	+	2033	4	novel_not_in_catalog	BCL2L13	novel	999	5	NA	NA	-4	-26459	any annotated donor/acceptor	FALSE	canonical	1	265	junction_3	106273.6496126862	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-20	True	NA	NA
PB.6127.3	chr19	+	763	6	full-splice_match	BAX	ENST00000345358.11	793	6	29	1	9	-1	multi-exon	FALSE	canonical	1	414464	junction_1	833176.772431013	NA	1	1	TRUE	NA	NA	NA	C	coding	192	579	24	602	20.0	16	True	AATAAA	-16
PB.6127.2	chr19	+	2053	3	full-splice_match	BAX	ENST00000503726.2	488	3	-604	-961	7	1	multi-exon	FALSE	canonical	1	2175198	junction_2	269666.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	181	546	809	1354	20.0	14	True	AATAAA	-15
PB.7595.5	chr22	+	2172	6	full-splice_match	BCL2L13	ENST00000493680.5	2112	6	-15	-45	0	45	multi-exon	FALSE	canonical	1	240760	junction_1	29989.458377236493	NA	3	NA	TRUE	NA	NA	NA	C	coding	201	606	181	786	20.0	0	True	AATAAA	-40
PB.7595.4	chr22	+	3186	6	full-splice_match	BCL2L13	ENST00000498133.5	2662	6	-2	-522	-2	81	multi-exon	FALSE	canonical	1	12048	junction_3	121570.97098501763	NA	3	1	TRUE	NA	NA	NA	C	coding	323	972	528	1499	40.0	-18	True	AATAAA	-32
PB.7595.7	chr22	+	3012	5	full-splice_match	BCL2L13	ENST00000337612.9	4905	5	173	1720	0	-5	multi-exon	FALSE	canonical	1	21369	junction_3	130991.26145090748	NA	5	NA	TRUE	NA	NA	NA	C	coding	323	972	440	1411	40.0	0	True	AATAAA	-24
PB.7595.6	chr22	+	3457	8	novel_not_in_catalog	BCL2L13	novel	999	5	NA	NA	0	82	any annotated donor/acceptor	FALSE	canonical	1	24441	junction_3	123794.22415031969	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	609	1769	35.0	-16	True	AATAAA	-33
PB.7595.1	chr22	+	3322	7	full-splice_match	BCL2L13	ENST00000317582.9	2992	7	170	-500	3	81	multi-exon	FALSE	canonical	1	240760	junction_1	38131.62492676591	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	178	1635	40.0	3	True	AATAAA	-32
PB.11742.5	chr9	+	2715	15	novel_in_catalog	ZNF618	novel	3018	15	NA	NA	34	-38	no_combination_of_known_junctions	FALSE	canonical	1	10380	junction_10	26511.63537015399	NA	0	NA	TRUE	NA	NA	NA	B	coding	877	2634	66	2699	85.0	7	True	NA	NA
PB.7595.3	chr22	+	3397	7	novel_not_in_catalog	BCL2L13	novel	999	5	NA	NA	-11	81	any annotated donor/acceptor	FALSE	canonical	1	24441	junction_3	137507.5482333202	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	739	1710	40.0	-27	True	AATAAA	-32
PB.7595.2	chr22	+	3186	6	full-splice_match	BCL2L13	ENST00000418951.6	5062	6	157	1719	0	-4	multi-exon	FALSE	canonical	1	56168	junction_4	108111.33495318612	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	613	1584	40.0	-16	True	AATAAA	-25
PB.172.20	chr1	-	2916	6	novel_not_in_catalog	SRSF10	novel	3487	6	NA	NA	-10	-19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	341092.86760728376	NA	2	1	TRUE	NA	NA	NA	C	coding	223	672	205	876	70.0	12	False	NA	NA
PB.282.1	chr1	-	2598	2	full-splice_match	C1orf216	ENST00000270815.4	3218	2	611	9	33	-9	multi-exon	FALSE	canonical	1	111009	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	229	690	161	850	40.0	22	True	AATAAA	-10
PB.56.2	chr1	+	2348	11	full-splice_match	ZBTB48	ENST00000377674.8	2293	11	-56	1	-9	-1	multi-exon	FALSE	canonical	1	36087	junction_1	82695.66515392448	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	215	2281	20.0	-4	True	AATAAA	-23
PB.2642.1	chr12	+	1930	2	full-splice_match	HOXC10	ENST00000303460.4	1936	2	3	3	3	-3	multi-exon	FALSE	canonical	1	115008	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	312	939	162	1100	20.0	-9704	False	AATAAA	-21
PB.811.4	chr1	-	1684	6	full-splice_match	RIT1	ENST00000368323.7	3445	6	2	1759	0	616	multi-exon	FALSE	canonical	1	224149	junction_5	83095.88845087342	NA	1	NA	TRUE	NA	NA	NA	C	coding	219	660	204	863	20.0	-31	True	ACTAAA	-34
PB.11472.10	chr9	-	2544	16	incomplete-splice_match	HAUS6	ENST00000380502.7	6536	17	196	5352	196	269	3prime_fragment	FALSE	canonical	1	52	junction_6	74129.60675273783	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2139	405	2543	40.0	-20	True	AATAAA	-23
PB.11742.4	chr9	+	3008	16	novel_in_catalog	ZNF618	novel	3018	15	NA	NA	32	-38	combination_of_known_junctions	FALSE	canonical	1	14443	junction_12	25518.725056101233	NA	0	NA	TRUE	NA	NA	NA	B	coding	974	2925	68	2992	85.0	5	True	NA	NA
PB.8195.4	chr3	+	5349	21	novel_in_catalog	SLMAP	novel	556	2	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	72009	junction_11	108943.63872492738	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	1198	3570	30.0	-415	False	AATAAA	-18
PB.56.3	chr1	+	2260	11	novel_in_catalog	ZBTB48	novel	1050	3	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	24478	junction_1	84832.98499310277	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	127	2193	20.0	-3	True	AATAAA	-23
PB.6222.1	chr19	-	2009	2	full-splice_match	ZNF784	ENST00000325351.4	2021	2	14	-2	14	2	multi-exon	FALSE	canonical	1	52877	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	323	972	27	998	5.0	296	False	ATTAAA	-18
PB.11044.11	chr8	+	2119	10	novel_not_in_catalog	PPP2R2A	novel	3940	10	NA	NA	34	0	any annotated donor/acceptor	FALSE	canonical	1	142	junction_1	228825.55701766454	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	537	1403	15.0	-533	False	AATAAA	-16
PB.6542.6	chr2	+	1937	9	novel_in_catalog	NAGK	novel	553	2	NA	NA	-4	0	intron_retention	FALSE	canonical	1	529080	junction_1	192575.28598949945	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	1333	1806	40.0	-7	True	AATAAA	-20
PB.6542.4	chr2	+	5723	5	novel_in_catalog	NAGK	novel	553	2	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	797836	junction_2	136718.48466922826	NA	3	NA	TRUE	NA	NA	NA	C	coding	104	315	5279	5593	35.0	-7	True	AATAAA	-19
PB.6542.5	chr2	+	3008	9	full-splice_match	NAGK	ENST00000475709.5	2986	9	-19	-3	0	0	multi-exon	FALSE	canonical	1	780386	junction_6	137540.00673252993	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	1996	2877	40.0	-3683	False	AATAAA	-20
PB.6542.2	chr2	+	4034	8	novel_in_catalog	NAGK	novel	462	3	NA	NA	11	8	intron_retention	FALSE	canonical	1	780386	junction_5	136360.7290522952	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	3476	3949	70.0	-9	True	NA	NA
PB.6542.3	chr2	+	2961	8	full-splice_match	NAGK	ENST00000472519.5	2857	8	-68	-36	5	15	multi-exon	FALSE	canonical	1	529080	junction_1	199013.8883565052	NA	2	1	TRUE	NA	NA	NA	C	coding	179	540	88	627	40.0	0	True	AATAAA	-37
PB.6542.1	chr2	+	1571	10	full-splice_match	NAGK	ENST00000613852.4	1801	10	1	229	1	0	multi-exon	FALSE	canonical	1	529080	junction_1	184317.81689915148	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	268	1440	40.0	-4035	False	AATAAA	-20
PB.5900.1	chr19	+	5291	6	novel_in_catalog	ZNF536	novel	787	4	NA	NA	-65	-28	no_combination_of_known_junctions	FALSE	canonical	1	3681	junction_1	6350.183663485648	NA	1	NA	TRUE	NA	NA	NA	A	coding	1300	3903	522	4424	65.0	0	True	ACTAAA	-31
PB.8195.5	chr3	+	5595	25	novel_in_catalog	SLMAP	novel	556	2	NA	NA	33	3	combination_of_known_junctions	FALSE	canonical	1	51346	junction_13	107612.39868039492	NA	1	NA	TRUE	NA	NA	NA	C	coding	842	2529	1185	3713	30.0	-46	True	AATAAA	-22
PB.6443.2	chr2	-	4952	38	full-splice_match	LRPPRC	ENST00000260665.11	6335	38	146	1237	117	533	multi-exon	FALSE	canonical	1	374963	junction_37	277755.02096967417	NA	0	NA	TRUE	NA	NA	NA	C	coding	1307	3924	174	4097	30.0	145	False	AATAAA	-17
PB.6443.1	chr2	-	6604	38	full-splice_match	LRPPRC	ENST00000260665.11	6335	38	15	-284	-1	284	multi-exon	FALSE	canonical	1	374963	junction_37	277755.02096967417	NA	1	NA	TRUE	NA	NA	NA	C	coding	1394	4185	44	4228	0.0	-2	True	AATAAA	-17
PB.2209.2	chr11	+	3399	2	full-splice_match	PRSS23	ENST00000280258.5	4015	2	290	326	9	-326	multi-exon	FALSE	canonical	1	607019	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	383	1152	136	1287	65.0	-14	True	AATAAA	-36
PB.2209.3	chr11	+	3709	2	full-splice_match	PRSS23	ENST00000280258.5	4015	2	302	4	-2	-4	multi-exon	FALSE	canonical	1	607019	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	124	1275	30.0	-2	True	NA	NA
PB.2209.1	chr11	+	1682	2	full-splice_match	PRSS23	ENST00000280258.5	4015	2	275	2058	-6	1069	multi-exon	FALSE	canonical	1	607019	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	151	1302	25.0	2	True	ATTAAA	-23
PB.2209.4	chr11	+	2251	5	full-splice_match	PRSS23	ENST00000532234.5	2172	5	21	-100	-2	-22	multi-exon	FALSE	canonical	1	26829	junction_1	13011.879283946651	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	1108	1479	80.0	-2	True	NA	NA
PB.7589.6	chr22	+	2258	7	novel_not_in_catalog	DUXAP8	novel	2102	8	NA	NA	-6	6529	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	AATAAA	-29
PB.7589.4	chr22	+	3557	8	full-splice_match	DUXAP8	ENST00000437781.5	2398	8	-16	-1143	-12	-1133	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7589.5	chr22	+	2231	7	novel_not_in_catalog	DUXAP8	novel	2102	8	NA	NA	-12	6529	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	AATAAA	-29
PB.7589.2	chr22	+	3284	6	novel_in_catalog	DUXAP8	novel	2102	8	NA	NA	-13	-1133	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.7589.3	chr22	+	4683	8	novel_in_catalog	DUXAP8	novel	2102	8	NA	NA	-12	3244	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	210	633	2299	2931	75.0	NA	False	NA	NA
PB.7589.1	chr22	+	3031	8	full-splice_match	DUXAP8	ENST00000437781.5	2398	8	-26	-607	-22	607	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.10985.12	chr8	+	1591	7	full-splice_match	FDFT1	ENST00000525954.5	1890	7	4	295	4	59	multi-exon	FALSE	canonical	1	2356622	junction_5	245477.5399621906	NA	2	NA	TRUE	NA	NA	NA	C	coding	476	1431	98	1528	10.0	-720	False	CATAAA	-29
PB.6578.1	chr2	+	1730	4	novel_in_catalog	LINC01291	novel	565	3	NA	NA	-122	936	combination_of_known_junctions	FALSE	canonical	1	4786	junction_1	4007.466725445834	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-387	False	NA	NA
PB.6309.9	chr2	+	1643	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	9	1619	0	486	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	61	1230	30.0	0	True	AATAAA	-18
PB.6309.8	chr2	+	1889	11	novel_in_catalog	RRM2	novel	3431	11	NA	NA	0	67883	no_combination_of_known_junctions	FALSE	canonical	1	8272	junction_10	348093.1481336569	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	61	1299	70.0	0	True	NA	NA
PB.10113.11	chr6	-	2748	17	full-splice_match	MAP3K7	ENST00000369329.7	4911	17	-44	2207	-44	-97	multi-exon	FALSE	canonical	1	91913	junction_6	127144.90599900609	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	207	2027	15.0	-23	True	AGTAAA	-17
PB.3578.1	chr14	-	3344	7	full-splice_match	TGFB3	ENST00000238682.7	2522	7	-779	-43	-779	43	multi-exon	FALSE	canonical	1	72149	junction_6	18856.3587278197	NA	2	NA	TRUE	NA	NA	NA	A	coding	412	1239	1078	2316	15.0	545	False	AATAAA	-17
PB.7637.3	chr22	+	4068	20	full-splice_match	PPIL2	ENST00000398831.7	2574	20	-18	-1476	-5	-2	multi-exon	FALSE	canonical	1	225695	junction_1	78618.46496037532	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	97	1659	25.0	-8	True	ATTAAA	-7
PB.6309.2	chr2	+	1809	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	9	1453	0	652	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	8	2	TRUE	NA	NA	NA	C	coding	389	1170	61	1230	30.0	0	True	ATTAAA	-14
PB.6309.1	chr2	+	3152	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	129	-10	107	9	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	217	1110	40.0	-6570	False	AATAAA	-30
PB.6309.7	chr2	+	2318	2	novel_not_in_catalog	RRM2	novel	3431	11	NA	NA	0	-1058	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.6309.6	chr2	+	3340	9	incomplete-splice_match	RRM2	ENST00000304567.9	3271	10	9	1	0	-1	intron_retention	FALSE	canonical	1	256426	junction_4	268999.41190723353	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	61	1146	25.0	0	True	AATAAA	-19
PB.6309.5	chr2	+	2873	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	8	390	-1	-390	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	62	1231	25.0	-1	True	GATAAA	-19
PB.6309.4	chr2	+	2457	10	full-splice_match	RRM2	ENST00000304567.9	3271	10	6	808	-3	-808	multi-exon	FALSE	canonical	1	256426	junction_4	283976.71931983146	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	64	1233	55.0	-3	True	AATACA	-18
PB.7057.6	chr2	+	1707	17	incomplete-splice_match	SP100	ENST00000409112.5	2198	23	-83	33706	27	3906	3prime_fragment	FALSE	canonical	1	98698	junction_15	196735.82565492488	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1593	115	1707	70.0	2	True	AAAACA	-27
PB.6214.2	chr19	-	2365	20	incomplete-splice_match	PPP1R12C	ENST00000263433.7	2924	22	5059	6	1118	-5	5prime_fragment	TRUE	canonical	1	265837	junction_7	196048.60834080324	NA	0	NA	TRUE	NA	NA	NA	A	coding	565	1698	115	1812	20.0	5136	False	AATAAA	-16
PB.1242.3	chr1	+	4403	9	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-25	-248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	93214.57992013641	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	818	1972	40.0	-3380	False	TTTAAA	-10
PB.1242.4	chr1	+	4721	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	38	-247	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	86524.66459161433	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1135	2289	35.0	-5	True	TTTAAA	-11
PB.1242.5	chr1	+	4171	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	23	-862	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	71326.6671168645	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1200	2354	20.0	10	True	TATAAA	-16
PB.1242.6	chr1	+	4915	11	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-2	-247	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	90658.07838074883	NA	3	NA	TRUE	NA	NA	NA	B	coding	384	1155	1329	2483	35.0	3	True	TTTAAA	-11
PB.10766.3	chr7	-	2276	10	novel_not_in_catalog	LHFPL3-AS1	novel	748	4	NA	NA	-331	-1	intron_retention	FALSE	canonical	1	18	junction_9	13959.709872644024	NA	3	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-340	False	AGTAAA	-19
PB.1242.8	chr1	+	4984	11	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	25	-244	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	93767.17762863507	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1395	2549	30.0	-3383	False	TTTAAA	-14
PB.3483.4	chr14	+	2800	13	novel_not_in_catalog	PRKCH	novel	582	4	NA	NA	-2865	-1	any annotated donor/acceptor	FALSE	canonical	1	298	junction_1	92555.49369237294	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	92	1660	35.0	NA	False	AATAAA	-13
PB.3483.1	chr14	+	3207	14	full-splice_match	PRKCH	ENST00000332981.9	3582	14	371	4	371	0	multi-exon	FALSE	canonical	1	127367	junction_1	70330.50002489304	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	15	2066	40.0	-1235	False	AATAAA	-14
PB.7057.4	chr2	+	1811	14	novel_in_catalog	SP100	novel	3882	25	NA	NA	9	6	combination_of_known_junctions	FALSE	canonical	1	34411	junction_10	215828.81243494095	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	42	1400	30.0	11	False	NA	NA
PB.3483.3	chr14	+	2944	14	full-splice_match	PRKCH	ENST00000555082.5	2932	14	-16	4	-16	0	multi-exon	FALSE	canonical	1	1772	junction_1	88786.51914984369	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	235	1803	40.0	-675	False	AATAAA	-14
PB.3483.2	chr14	+	3471	15	novel_not_in_catalog	PRKCH	novel	582	4	NA	NA	-135	-1	any annotated donor/acceptor	FALSE	canonical	1	357	junction_1	88505.8857013222	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	280	2331	35.0	3	True	AATAAA	-13
PB.5087.3	chr17	+	3263	13	full-splice_match	CALCOCO2	ENST00000258947.7	3682	13	42	377	4	-377	multi-exon	FALSE	canonical	1	506792	junction_1	213556.43494070446	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	60	1400	30.0	-5	True	AATAAA	-17
PB.5087.2	chr17	+	2442	12	novel_in_catalog	CALCOCO2	novel	3682	13	NA	NA	3	430	intron_retention	FALSE	canonical	1	506792	junction_1	222854.1507952998	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	482	1564	35.0	-14	False	AATAAA	-22
PB.5087.1	chr17	+	2155	12	novel_in_catalog	CALCOCO2	novel	3682	13	NA	NA	2	433	combination_of_known_junctions	TRUE	canonical	1	5764	junction_10	342379.733212884	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	70	1317	35.0	-15	False	AATAAA	-25
PB.10766.1	chr7	-	1380	9	novel_not_in_catalog	LHFPL3-AS1	novel	748	4	NA	NA	8	-1	any annotated donor/acceptor	FALSE	canonical	1	264	junction_4	14170.471573288414	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AGTAAA	-19
PB.5087.7	chr17	+	2273	13	full-splice_match	CALCOCO2	ENST00000258947.7	3682	13	45	1364	-1	428	multi-exon	FALSE	canonical	1	506792	junction_1	213556.43494070446	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	57	1397	25.0	-2	True	AATAAA	-20
PB.5087.6	chr17	+	2390	13	full-splice_match	CALCOCO2	ENST00000258947.7	3682	13	43	1249	-3	543	multi-exon	FALSE	canonical	1	506792	junction_1	213556.43494070446	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	59	1399	25.0	-4	True	AATAAA	-20
PB.5087.5	chr17	+	2556	13	novel_in_catalog	CALCOCO2	novel	3682	13	NA	NA	4	429	intron_retention	TRUE	canonical	0	0	junction_3	406706.1025852151	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	597	1679	30.0	-5	True	AATAAA	-21
PB.5087.4	chr17	+	3155	13	full-splice_match	CALCOCO2	ENST00000258947.7	3682	13	42	485	4	-485	multi-exon	FALSE	canonical	1	506792	junction_1	213556.43494070446	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	60	1400	20.0	-5	True	GATAAA	-18
PB.10766.6	chr7	-	2938	7	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	-5	1767	any annotated donor/acceptor	FALSE	canonical	1	77	junction_2	16112.803697680922	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	5	True	AATAAA	-25
PB.5087.9	chr17	+	4142	13	full-splice_match	CALCOCO2	ENST00000258947.7	3682	13	43	-503	-3	503	multi-exon	FALSE	canonical	1	506792	junction_1	213556.43494070446	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	59	1399	25.0	-4	True	NA	NA
PB.5087.8	chr17	+	2177	12	novel_in_catalog	CALCOCO2	novel	3682	13	NA	NA	4	425	no_combination_of_known_junctions	FALSE	canonical	1	2102	junction_9	346461.93918388477	NA	1	NA	TRUE	NA	NA	NA	C	coding	414	1245	60	1304	15.0	-5	True	AATAAA	-17
PB.3502.1	chr14	-	3109	7	full-splice_match	RAB15	ENST00000533601.6	3515	7	405	1	-115	-1	multi-exon	FALSE	canonical	1	165837	junction_4	41216.310714529835	NA	0	NA	TRUE	NA	NA	NA	A	coding	166	501	72	572	10.0	5181	False	AATAAA	-15
PB.10766.7	chr7	-	2873	6	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	-15	1767	any annotated donor/acceptor	FALSE	canonical	1	300	junction_3	17054.48284293605	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-24	True	AATAAA	-25
PB.3233.2	chr13	-	3411	27	incomplete-splice_match	DOCK9	ENST00000627024.2	4096	33	56922	2	-32477	-2	5prime_fragment	FALSE	canonical	1	111162	junction_12	27167.25087733848	NA	7	1	TRUE	NA	NA	NA	B	coding	1019	3060	195	3254	20.0	9096	False	AATAAA	-39
PB.222.4	chr1	-	3548	7	novel_in_catalog	DNAJC8	novel	483	5	NA	NA	-8	0	intron_retention	FALSE	canonical	1	161763	junction_4	398777.6163437531	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	36	365	25.0	-5	True	AATAAA	-12
PB.9349.8	chr5	-	4298	21	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	-466	combination_of_known_junctions	FALSE	canonical	1	1950	junction_20	57830.77921131186	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	164	2368	60.0	-1	True	NA	NA
PB.3233.1	chr13	-	7393	53	novel_not_in_catalog	DOCK9	novel	7887	53	NA	NA	14615	1	any annotated donor/acceptor	FALSE	canonical	1	150	junction_52	51825.414989104516	NA	0	NA	TRUE	NA	NA	NA	B	coding	2021	6066	188	6253	0.0	7609	False	ATTAAA	-45
PB.10766.4	chr7	-	2642	4	full-splice_match	LHFPL3-AS1	ENST00000411448.5	856	4	-13	-1773	8	1773	multi-exon	FALSE	canonical	1	4885	junction_1	15824.706084685005	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-1	True	AATAAA	-31
PB.9349.2	chr5	-	4777	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	58	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	35.0	-1	True	AATATA	-24
PB.9349.3	chr5	-	4293	21	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	-2	-468	combination_of_known_junctions	FALSE	canonical	1	52454	junction_15	37252.94766981534	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	167	2365	70.0	-4	True	NA	NA
PB.10766.5	chr7	-	3120	9	novel_not_in_catalog	LHFPL3-AS1	novel	1196	7	NA	NA	-2	1767	any annotated donor/acceptor	FALSE	canonical	1	73	junction_4	14738.884599928178	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-11	True	AATAAA	-25
PB.9349.6	chr5	-	4281	20	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	-438	combination_of_known_junctions	FALSE	canonical	1	38118	junction_15	39148.2896474588	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	164	2323	25.0	-1	True	ATTAAA	-28
PB.9349.7	chr5	-	4379	22	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	-439	combination_of_known_junctions	FALSE	canonical	1	35397	junction_15	42836.76657163709	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	164	2422	25.0	-1	True	ATTAAA	-27
PB.9349.4	chr5	-	4459	23	full-splice_match	MCTP1	ENST00000312216.12	2337	23	-163	-1959	0	-437	multi-exon	FALSE	canonical	1	40070	junction_16	44679.012082814465	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	164	2500	20.0	-1	True	ATTAAA	-29
PB.9349.5	chr5	-	4172	19	novel_in_catalog	MCTP1	novel	1905	6	NA	NA	0	-437	no_combination_of_known_junctions	FALSE	canonical	1	8792	junction_3	50699.279525891136	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	164	2053	20.0	-1	True	ATTAAA	-29
PB.10183.2	chr6	-	8104	7	novel_in_catalog	AL132671.2	novel	930	7	NA	NA	-28927	-242061	intron_retention	FALSE	canonical	1	293082	junction_4	28814.916257325243	NA	7	NA	TRUE	NA	NA	NA	B	coding	293	882	4241	5122	25.0	-7	True	AATAAA	-21
PB.11915.1	chr9	-	1995	9	full-splice_match	NPDC1	ENST00000371601.4	1494	9	-495	-6	-495	6	multi-exon	FALSE	canonical	1	285440	junction_8	392792.90978753596	NA	0	NA	TRUE	NA	NA	NA	A	coding	325	978	710	1687	5.0	-4	True	ATTAAA	-19
PB.11147.4	chr8	-	3703	32	novel_in_catalog	NSMAF	novel	3569	31	NA	NA	15	-7	combination_of_known_junctions	FALSE	canonical	1	3712	junction_30	93993.84607899691	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	745	3108	35.0	-1	True	ATTAAA	-14
PB.4899.11	chr17	-	4659	21	incomplete-splice_match	MYO1D	ENST00000579584.5	3500	22	20	9341	20	-9203	3prime_fragment	FALSE	canonical	1	178889	junction_20	47339.847092486474	NA	5	NA	TRUE	NA	NA	NA	C	coding	955	2868	253	3120	100.0	-1	True	NA	NA
PB.4899.10	chr17	-	3409	22	full-splice_match	MYO1D	ENST00000579584.5	3500	22	-47	138	-14	0	multi-exon	FALSE	canonical	1	13350	junction_1	69314.13363842436	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2886	320	3205	30.0	110	False	NA	NA
PB.4232.1	chr16	+	1737	16	full-splice_match	ABAT	ENST00000268251.12	4836	16	53	3046	1	-2	multi-exon	FALSE	canonical	1	87989	junction_1	46886.53099586988	NA	0	NA	TRUE	NA	NA	NA	A	coding	500	1503	136	1638	35.0	-3	True	NA	NA
PB.8853.53	chr4	-	3839	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	31517	junction_14	328411.7187383568	NA	2	NA	TRUE	NA	NA	NA	C	coding	1207	3624	164	3787	75.0	9322	False	AAGAAA	-7
PB.8853.52	chr4	-	3759	27	full-splice_match	SEC31A	ENST00000395310.6	4259	27	126	374	-4	3	multi-exon	FALSE	canonical	1	369485	junction_13	289306.58689011197	NA	0	NA	TRUE	NA	NA	NA	C	coding	1220	3663	58	3720	70.0	1	True	NA	NA
PB.4716.22	chr17	+	2251	6	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	1	-224	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	81015.46396336936	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	31	879	80.0	3	True	NA	NA
PB.5550.5	chr19	-	3055	15	full-splice_match	MED16	ENST00000395808.7	3420	15	31	334	6	0	multi-exon	FALSE	canonical	1	233577	junction_7	80292.96157417561	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	121	2646	5.0	-1	True	AATAAA	-15
PB.8853.57	chr4	-	3706	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	83080	junction_13	311793.74952592235	NA	1	NA	TRUE	NA	NA	NA	C	coding	1194	3585	70	3654	75.0	-11	True	AAGAAA	-7
PB.8853.56	chr4	-	3690	25	full-splice_match	SEC31A	ENST00000348405.8	4012	25	-39	361	3	0	multi-exon	FALSE	canonical	1	315490	junction_13	282463.3282683168	NA	0	NA	TRUE	NA	NA	NA	C	coding	1181	3546	93	3638	75.0	-34	True	AAGAAA	-7
PB.8853.55	chr4	-	3776	27	full-splice_match	SEC31A	ENST00000508502.5	3801	27	14	11	-5	0	multi-exon	FALSE	canonical	1	173262	junction_5	309637.59028295043	NA	0	NA	TRUE	NA	NA	NA	C	coding	1205	3618	107	3724	75.0	-48	True	AAGAAA	-7
PB.8853.54	chr4	-	3866	28	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	133055	junction_6	337050.2973022599	NA	4	NA	TRUE	NA	NA	NA	C	coding	1233	3702	113	3814	75.0	-54	True	AAGAAA	-7
PB.8853.59	chr4	-	3415	26	full-splice_match	SEC31A	ENST00000311785.11	3909	26	134	360	-5	0	multi-exon	FALSE	canonical	1	277702	junction_5	302849.90903092845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1106	3321	43	3363	75.0	16	True	AAGAAA	-7
PB.8853.58	chr4	-	3615	25	full-splice_match	SEC31A	ENST00000505984.5	3596	25	2	-21	2	-1	multi-exon	FALSE	canonical	1	173262	junction_5	305932.70482001925	NA	1	NA	TRUE	NA	NA	NA	C	coding	1166	3501	64	3564	75.0	-5	True	AAGAAA	-6
PB.2605.8	chr12	-	2698	11	novel_in_catalog	LIMA1	novel	2652	5	NA	NA	-42	-37	combination_of_known_junctions	FALSE	canonical	1	4544	junction_10	207297.16417790187	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	277	2556	80.0	-1	True	NA	NA
PB.6884.20	chr2	+	4127	24	novel_not_in_catalog	DNAJC10	novel	5783	23	NA	NA	-14	663	any annotated donor/acceptor	FALSE	canonical	1	15558	junction_13	213695.90454343098	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	430	2751	45.0	-2	True	ATTAAA	-18
PB.6884.21	chr2	+	2096	12	incomplete-splice_match	DNAJC10	ENST00000491074.5	3962	25	-38	37240	-14	18	3prime_fragment	FALSE	canonical	1	74487	junction_11	197613.54787945113	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	430	1428	65.0	-2	True	NA	NA
PB.6884.22	chr2	+	1579	13	incomplete-splice_match	DNAJC10	ENST00000264065.11	20129	24	-12	53147	-12	933	3prime_fragment	FALSE	canonical	1	343539	junction_11	132152.45039502566	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1152	428	1579	60.0	0	True	AATGAA	-22
PB.6884.23	chr2	+	2994	24	novel_not_in_catalog	DNAJC10	novel	5783	23	NA	NA	-12	-87	any annotated donor/acceptor	FALSE	canonical	1	15558	junction_13	213695.90454343098	NA	0	NA	TRUE	NA	NA	NA	C	coding	773	2322	428	2749	35.0	0	True	NA	NA
PB.6884.24	chr2	+	3779	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-11	16361	-11	258	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	427	2808	20.0	1	True	NA	NA
PB.6884.25	chr2	+	4647	23	full-splice_match	DNAJC10	ENST00000616986.4	5783	23	221	915	-10	-915	multi-exon	FALSE	canonical	1	52732	junction_10	198452.65488736864	NA	22	NA	TRUE	NA	NA	NA	C	coding	747	2244	426	2669	25.0	2	True	AATAAA	-24
PB.6884.26	chr2	+	3672	23	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-9	-82	intron_retention	FALSE	canonical	1	2976	junction_10	206061.0895341326	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	425	1285	20.0	3	True	NA	NA
PB.6884.27	chr2	+	4018	24	novel_in_catalog	DNAJC10	novel	5783	23	NA	NA	-7	128	intron_retention	FALSE	canonical	1	74487	junction_11	193464.17468998328	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	423	1421	10.0	5	True	TATAAA	-5
PB.6884.28	chr2	+	2830	24	full-splice_match	DNAJC10	ENST00000264065.11	20129	24	-7	17306	-7	-306	multi-exon	FALSE	canonical	1	343539	junction_11	160366.8126258223	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	423	2804	50.0	5	True	AAAAAG	-4
PB.6884.29	chr2	+	2338	19	incomplete-splice_match	DNAJC10	ENST00000264065.11	20129	24	-7	36666	-7	17414	3prime_fragment	FALSE	canonical	1	343539	junction_11	161100.0914138647	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	423	2336	55.0	5	True	NA	NA
PB.113.1	chr1	+	2605	11	incomplete-splice_match	SPEN	ENST00000375759.7	12232	15	-44	11863	-44	7691	3prime_fragment	FALSE	canonical	1	124614	junction_2	45209.70877466477	NA	0	NA	TRUE	NA	NA	NA	B	coding	785	2355	249	2603	70.0	-39	True	NA	NA
PB.9856.8	chr6	-	1572	2	full-splice_match	FLOT1	ENST00000484693.1	1001	2	-74	-497	-18	-348	multi-exon	FALSE	canonical	1	679585	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-3	True	NA	NA
PB.8195.2	chr3	+	5448	24	novel_in_catalog	SLMAP	novel	556	2	NA	NA	79	-5	combination_of_known_junctions	FALSE	canonical	1	49539	junction_12	102912.66454321229	NA	1	NA	TRUE	NA	NA	NA	C	coding	825	2478	1139	3616	35.0	0	True	ATTAAA	-12
PB.9499.1	chr5	+	1886	12	full-splice_match	TMCO6	ENST00000394671.7	1887	12	6	-5	-2	-1	multi-exon	FALSE	canonical	1	43689	junction_1	38872.70191235672	NA	0	NA	TRUE	NA	NA	NA	A	coding	493	1482	96	1577	15.0	-37	True	AATAAA	-22
PB.5097.8	chr17	-	2270	12	novel_in_catalog	SPOP	novel	2985	11	NA	NA	-4	-32	combination_of_known_junctions	FALSE	canonical	1	11393	junction_10	225656.09521530365	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	297	1421	90.0	-23	True	NA	NA
PB.5097.9	chr17	-	2119	10	full-splice_match	SPOP	ENST00000504102.5	1865	10	223	-477	-6	-32	multi-exon	FALSE	canonical	1	238796	junction_9	117088.65094933755	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	146	1270	90.0	25	True	NA	NA
PB.4791.8	chr17	+	2649	14	novel_not_in_catalog	TRPV2	novel	2808	15	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	1	10638	junction_12	133556.0224063517	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2040	371	2410	35.0	0	True	AATATA	-15
PB.4791.9	chr17	+	2243	12	novel_not_in_catalog	TRPV2	novel	2808	15	NA	NA	31	-2	any annotated donor/acceptor	FALSE	canonical	1	1964	junction_10	146523.3578215066	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	369	2006	30.0	2	True	AATATA	-13
PB.4791.6	chr17	+	4050	14	novel_in_catalog	TRPV2	novel	2808	15	NA	NA	27	-2	intron_retention	FALSE	canonical	1	160630	junction_7	127054.83790043308	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	373	2451	30.0	-2	True	AATATA	-13
PB.4791.7	chr17	+	3458	15	full-splice_match	TRPV2	ENST00000338560.11	2808	15	216	-866	216	866	multi-exon	FALSE	canonical	1	160630	junction_7	124641.37374966661	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	184	2478	15.0	0	True	NA	NA
PB.5097.6	chr17	-	2339	11	full-splice_match	SPOP	ENST00000393328.6	2985	11	1	645	1	-32	multi-exon	FALSE	canonical	1	4114	junction_9	211104.42613003167	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	366	1490	90.0	-13	True	NA	NA
PB.5097.7	chr17	-	2346	12	novel_in_catalog	SPOP	novel	2985	11	NA	NA	-9	-32	combination_of_known_junctions	FALSE	canonical	1	4087	junction_10	226771.3596327498	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	373	1497	90.0	-28	True	NA	NA
PB.4791.2	chr17	+	3282	13	incomplete-splice_match	TRPV2	ENST00000338560.11	2808	15	0	2536	0	2198	3prime_fragment	TRUE	canonical	1	160630	junction_7	110217.24010143057	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	400	2517	95.0	-29	True	NA	NA
PB.4791.3	chr17	+	3233	14	novel_not_in_catalog	TRPV2	novel	2808	15	NA	NA	0	1	intron_retention	FALSE	canonical	1	81376	junction_7	137290.32260680027	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	400	2031	30.0	-29	True	AATATA	-16
PB.5097.2	chr17	-	2575	13	novel_in_catalog	SPOP	novel	2985	11	NA	NA	5	212	combination_of_known_junctions	FALSE	canonical	1	4087	junction_11	240035.94533300574	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	358	1482	10.0	38	True	TATAAA	-16
PB.5097.3	chr17	-	2611	12	novel_in_catalog	SPOP	novel	2985	11	NA	NA	-1	211	combination_of_known_junctions	FALSE	canonical	1	4087	junction_10	226771.3596327498	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	395	1519	10.0	10	True	TATAAA	-15
PB.113.5	chr1	+	3865	11	novel_in_catalog	SPEN	novel	12232	15	NA	NA	-45	7691	combination_of_known_junctions	FALSE	canonical	1	66892	junction_2	55140.70486500876	NA	0	NA	TRUE	NA	NA	NA	B	coding	744	2232	1632	3863	70.0	-40	True	NA	NA
PB.11147.6	chr8	-	1697	11	novel_in_catalog	NSMAF	novel	3569	31	NA	NA	-37	-7	combination_of_known_junctions	FALSE	canonical	1	12958	junction_10	104545.42409828372	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	365	1102	35.0	4238	False	ATTAAA	-14
PB.10170.1	chr6	+	3335	2	novel_not_in_catalog	MARCKS	novel	4275	2	NA	NA	-40	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	8	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-5114	False	AATAAA	-17
PB.10170.3	chr6	+	1647	2	novel_not_in_catalog	MARCKS	novel	4275	2	NA	NA	-17	-1670	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	8	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-15
PB.10170.2	chr6	+	1739	2	novel_not_in_catalog	MARCKS	novel	4275	2	NA	NA	-17	-1670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	11	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-15
PB.10170.5	chr6	+	1545	2	novel_not_in_catalog	MARCKS	novel	4275	2	NA	NA	-16	-1670	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	4	1	FALSE	NA	NA	NA	B	coding	106	321	3	323	20.0	-1	True	AATAAA	-15
PB.10170.4	chr6	+	1564	2	novel_not_in_catalog	MARCKS	novel	4275	2	NA	NA	-16	-1671	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-14
PB.10170.6	chr6	+	1620	2	novel_not_in_catalog	MARCKS	novel	4275	2	NA	NA	-16	-1670	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-15
PB.1106.4	chr1	-	2387	8	novel_not_in_catalog	NEK2	novel	1318	8	NA	NA	-3	-555	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	42595.72190073667	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	155	1309	95.0	-13	True	NA	NA
PB.1157.3	chr1	-	3955	13	novel_in_catalog	ENAH	novel	13168	15	NA	NA	-30	2	no_combination_of_known_junctions	FALSE	canonical	1	80428	junction_8	215283.17666344842	NA	2	NA	TRUE	NA	NA	NA	C	coding	533	1602	57	1658	100.0	587	False	NA	NA
PB.7527.5	chr21	+	3188	15	novel_in_catalog	MX2	novel	3042	14	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	127	junction_1	89282.9366261938	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	332	2479	25.0	-2	True	AATAAA	-24
PB.7134.1	chr20	+	5975	3	incomplete-splice_match	STK35	ENST00000381482.7	6685	4	1297	5	17	-5	5prime_fragment	FALSE	canonical	1	132265	junction_1	7386.5	NA	7	NA	TRUE	NA	NA	NA	B	coding	362	1089	83	1171	30.0	-30	True	AATAAA	-38
PB.1292.1	chr10	-	2831	1	intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	134	405	1144	1548	25.0	NA	False	AATAAA	-14
PB.1040.12	chr1	-	4967	27	full-splice_match	KDM5B	ENST00000367265.8	10341	27	990	4384	1	-181	multi-exon	FALSE	canonical	1	203318	junction_26	109707.08084915845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	176	4810	75.0	0	True	NA	NA
PB.1040.13	chr1	-	4550	27	incomplete-splice_match	KDM5B	ENST00000367264.7	6520	28	33	2470	1	0	3prime_fragment	FALSE	canonical	1	16204	junction_21	136544.8775855472	NA	0	NA	TRUE	NA	NA	NA	C	coding	1469	4407	144	4550	70.0	-10	True	AAGAAA	-13
PB.7034.11	chr2	-	2856	2	novel_in_catalog	PAX3	novel	3170	10	NA	NA	-1	-1190	intron_retention	FALSE	canonical	1	16263	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	383	778	85.0	-2	True	TTTAAA	-15
PB.7034.10	chr2	-	3319	5	novel_in_catalog	PAX3	novel	3170	10	NA	NA	43	66	combination_of_known_junctions	FALSE	canonical	1	1627	junction_1	10053.191517498311	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	89	733	35.0	527	False	AATAAA	-11
PB.1040.16	chr1	-	3589	23	incomplete-splice_match	KDM5B	ENST00000367264.7	6520	28	33	8079	1	-9	3prime_fragment	FALSE	canonical	1	16204	junction_17	111570.05996582085	NA	0	NA	TRUE	NA	NA	NA	C	coding	1148	3444	144	3587	70.0	-10	True	NA	NA
PB.1040.17	chr1	-	2653	12	incomplete-splice_match	KDM5B	ENST00000648473.1	6703	27	32	24652	0	934	3prime_fragment	FALSE	canonical	1	203318	junction_11	44096.334921068825	NA	2	NA	TRUE	NA	NA	NA	C	coding	596	1791	145	1935	35.0	-11	True	AATAAA	-11
PB.7079.4	chr2	+	4494	28	novel_in_catalog	DGKD	novel	6297	30	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	39847	junction_12	67447.64737754337	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1767	2728	4494	75.0	0	True	NA	NA
PB.1040.15	chr1	-	3483	22	incomplete-splice_match	KDM5B	ENST00000648473.1	6703	27	33	8067	1	-7	3prime_fragment	FALSE	canonical	1	203318	junction_21	68067.40738944807	NA	0	NA	TRUE	NA	NA	NA	C	coding	1113	3339	144	3482	60.0	-10	True	NA	NA
PB.7940.1	chr3	+	1871	8	novel_in_catalog	PPARG	novel	2017	8	NA	NA	10	2	no_combination_of_known_junctions	FALSE	canonical	1	25	junction_1	85923.32655647481	NA	0	NA	TRUE	NA	NA	NA	A	coding	477	1434	242	1675	35.0	-14	True	ATTAAA	-16
PB.9370.2	chr5	-	1744	8	full-splice_match	GIN1	ENST00000399004.6	3229	8	0	1485	0	-3	multi-exon	FALSE	canonical	1	53647	junction_5	9080.844640657338	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	96	1664	40.0	-14	False	ATTAAA	-13
PB.6460.13	chr2	+	5246	6	novel_not_in_catalog	FOXN2	novel	932	5	NA	NA	295	0	intron_retention	FALSE	canonical	1	3859	junction_1	58937.79603751739	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	100	1395	5.0	-2622	False	AATAAA	-18
PB.6460.12	chr2	+	5449	7	novel_not_in_catalog	FOXN2	novel	932	5	NA	NA	234	0	intron_retention	FALSE	canonical	1	2569	junction_1	58967.36312477342	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	303	1598	5.0	-2683	False	AATAAA	-18
PB.6460.11	chr2	+	5146	6	novel_in_catalog	FOXN2	novel	932	5	NA	NA	4	-116	intron_retention	FALSE	canonical	1	89572	junction_1	27060.18283308522	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	116	1411	25.0	32	True	ATTAAA	-15
PB.6460.10	chr2	+	1575	7	full-splice_match	FOXN2	ENST00000340553.7	5408	7	-28	3861	-28	-132	multi-exon	FALSE	canonical	1	34617	junction_1	49986.45950988461	NA	2	NA	TRUE	NA	NA	NA	C	coding	428	1284	290	1573	65.0	0	True	NA	NA
PB.6193.1	chr19	-	2597	4	full-splice_match	ZNF816	ENST00000457013.6	553	4	34	-2078	1	25	multi-exon	FALSE	canonical	1	13946	junction_3	11645.100524350239	NA	4	1	TRUE	NA	NA	NA	C	coding	651	1956	177	2132	20.0	-5	True	TATAAA	-43
PB.6193.2	chr19	-	2532	4	full-splice_match	ZNF816	ENST00000444460.6	2504	4	0	-28	0	28	multi-exon	FALSE	canonical	1	29526	junction_3	5395.406441285649	NA	2	NA	TRUE	NA	NA	NA	C	coding	651	1956	172	2127	75.0	-10	True	NA	NA
PB.6193.3	chr19	-	3698	3	full-splice_match	ZNF816	ENST00000270457.8	582	3	-11	-3105	0	28	multi-exon	FALSE	canonical	1	29526	junction_2	6268.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	581	1746	1548	3293	75.0	-10	True	NA	NA
PB.5850.2	chr19	+	2548	15	full-splice_match	CRTC1	ENST00000338797.10	6929	15	0	4381	0	0	multi-exon	FALSE	canonical	1	22295	junction_3	59222.27960516763	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	26	1978	15.0	-13	True	AATAAA	-16
PB.5850.1	chr19	+	2545	14	full-splice_match	CRTC1	ENST00000321949.12	2501	14	-43	-1	-43	1	multi-exon	FALSE	canonical	1	27166	junction_11	50321.97540548323	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	70	1974	20.0	2	True	AATAAA	-17
PB.11243.15	chr8	+	2788	2	incomplete-splice_match	DPY19L4	ENST00000520774.5	581	5	41	10742	16	-10706	3prime_fragment	FALSE	canonical	1	150348	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	82	249	84	332	90.0	16	True	NA	NA
PB.32.1	chr1	+	2358	18	full-splice_match	PRKCZ	ENST00000378567.7	2326	18	-34	2	-34	0	multi-exon	FALSE	canonical	1	64951	junction_1	133455.12976627858	NA	0	NA	TRUE	NA	NA	NA	A	coding	592	1779	196	1974	15.0	25	True	AATAAA	-18
PB.9836.12	chr6	+	5442	7	incomplete-splice_match	HLA-A	ENST00000376809.9	1611	8	63	-3725	-15	3725	intron_retention	FALSE	canonical	1	5406965	junction_6	3168709.242068641	NA	3	NA	TRUE	NA	NA	NA	C	coding	394	1185	22	1206	25.0	1	True	NA	NA
PB.8791.1	chr4	+	4492	1	full-splice_match	AC068620.1	ENST00000602927.1	529	1	-112	-3851	-112	3851	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-6	True	NA	NA
PB.11243.13	chr8	+	5593	20	novel_not_in_catalog	DPY19L4	novel	680	4	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	45324.34147330681	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	100	2271	30.0	0	True	AATAAA	-16
PB.144.1	chr1	-	3356	12	novel_not_in_catalog	PINK1-AS	novel	4443	3	NA	NA	-9195	-5152	intron_retention	FALSE	canonical	0	0	junction_1	1210269.8450247631	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	39	1358	50.0	135	False	NA	NA
PB.3320.2	chr14	-	2082	7	full-splice_match	C14orf93	ENST00000299088.10	3354	7	-23	1295	-8	-58	multi-exon	FALSE	canonical	1	24800	junction_6	33867.00737197388	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	454	2070	25.0	-32	False	AATAAA	-12
PB.7097.2	chr2	-	3589	17	novel_in_catalog	HDAC4	novel	8976	27	NA	NA	-9	641	combination_of_known_junctions	FALSE	canonical	1	9432	junction_1	31507.27379306394	NA	0	NA	TRUE	NA	NA	NA	B	coding	758	2277	263	2539	25.0	-1	True	AATAAA	-20
PB.11147.1	chr8	-	3940	33	novel_not_in_catalog	NSMAF	novel	3569	31	NA	NA	18	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_29	111619.81459064515	NA	36	3	TRUE	NA	NA	NA	C	coding	882	2649	696	3344	30.0	2	True	ATTAAA	-15
PB.7097.1	chr2	-	3955	27	novel_in_catalog	HDAC4	novel	8976	27	NA	NA	-9	372	combination_of_known_junctions	FALSE	canonical	1	19750	junction_26	22424.897535667966	NA	1	NA	TRUE	NA	NA	NA	B	coding	1089	3270	263	3532	35.0	-1	True	ATTAAA	-17
PB.3320.1	chr14	-	2353	7	full-splice_match	C14orf93	ENST00000299088.10	3354	7	5	996	-3	-2	multi-exon	FALSE	canonical	1	24800	junction_6	33867.00737197388	NA	2	NA	TRUE	NA	NA	NA	C	coding	538	1617	426	2042	15.0	-4	True	AAGAAA	-18
PB.8305.11	chr3	-	5688	1	full-splice_match	AC108693.1	ENST00000496068.1	432	1	-4987	-269	-4987	269	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-1	True	NA	NA
PB.754.1	chr1	+	3044	1	incomplete-splice_match	SNX27	ENST00000368843.8	7250	12	84002	17	20175	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-328	False	AATAAA	-14
PB.6403.7	chr2	+	1245	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	-3	10707	-3	21	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	250	984	30.0	-3	True	AATAAA	-22
PB.10013.8	chr6	+	3353	24	novel_in_catalog	TMEM63B	novel	3318	24	NA	NA	8	-25	combination_of_known_junctions	FALSE	canonical	1	20250	junction_1	109271.58348512177	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	245	2743	80.0	18	True	NA	NA
PB.10013.1	chr6	+	3416	24	novel_not_in_catalog	TMEM63B	novel	3318	24	NA	NA	-30	0	any annotated donor/acceptor	TRUE	canonical	1	10686	junction_1	110682.2220661689	NA	1	NA	TRUE	NA	NA	NA	C	coding	832	2499	283	2781	15.0	-3881	False	AATAAA	-18
PB.10013.3	chr6	+	3315	24	full-splice_match	TMEM63B	ENST00000259746.13	3318	24	2	1	2	0	multi-exon	FALSE	canonical	1	7773	junction_1	111115.1176557035	NA	1	NA	TRUE	NA	NA	NA	C	coding	832	2499	182	2680	15.0	4	True	AATAAA	-18
PB.10013.2	chr6	+	3225	23	novel_not_in_catalog	TMEM63B	novel	3318	24	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	2782	junction_18	138039.0437914036	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	255	1973	15.0	0	True	AATAAA	-18
PB.1411.10	chr10	+	5064	6	full-splice_match	ASAH2B	ENST00000374006.1	632	6	9	-4441	5	9	multi-exon	FALSE	canonical	1	536	junction_3	5814.750326540255	NA	3	1	TRUE	NA	NA	NA	C	coding	165	498	57	554	35.0	21	True	AATAAA	-18
PB.10013.4	chr6	+	3208	23	novel_in_catalog	TMEM63B	novel	3318	24	NA	NA	3	-25	no_combination_of_known_junctions	FALSE	canonical	1	7773	junction_1	137960.2821719679	NA	3	NA	TRUE	NA	NA	NA	C	coding	805	2418	181	2598	80.0	5	True	NA	NA
PB.10013.7	chr6	+	3201	24	novel_not_in_catalog	TMEM63B	novel	3318	24	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	128045.57572100648	NA	16	1	TRUE	NA	NA	NA	C	coding	779	2340	150	2489	15.0	0	True	AATAAA	-18
PB.10013.6	chr6	+	3177	25	novel_not_in_catalog	TMEM63B	novel	3318	24	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	126702.65860064744	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	150	2825	15.0	0	True	AATAAA	-18
PB.639.1	chr1	+	6388	21	novel_in_catalog	ATP1A1	novel	654	5	NA	NA	-39	-1	intron_retention	FALSE	canonical	1	1694424	junction_1	1118909.0743294158	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	292	1971	10.0	-110	False	AATAAA	-17
PB.639.2	chr1	+	3566	23	full-splice_match	ATP1A1	ENST00000295598.9	3654	23	86	2	77	0	multi-exon	FALSE	canonical	1	1694424	junction_1	1092091.6617252578	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	167	3238	10.0	15	False	AATAAA	-18
PB.639.3	chr1	+	4719	21	novel_in_catalog	ATP1A1	novel	654	5	NA	NA	-20	0	intron_retention	FALSE	canonical	1	1694424	junction_1	1144698.060022227	NA	26	3	TRUE	NA	NA	NA	C	coding	517	1554	2838	4391	10.0	-4	True	AATAAA	-18
PB.639.4	chr1	+	3495	22	novel_in_catalog	ATP1A1	novel	654	5	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	26673	junction_12	1425428.2640822784	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	2112	3167	10.0	-3	True	AATAAA	-18
PB.639.5	chr1	+	3000	21	novel_not_in_catalog	ATP1A1	novel	654	5	NA	NA	-19	-430	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	1405207.7842657464	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2100	900	2999	10.0	-3	True	NA	NA
PB.639.6	chr1	+	4173	22	novel_in_catalog	ATP1A1	novel	654	5	NA	NA	-16	0	intron_retention	FALSE	canonical	1	1694424	junction_1	1117463.050591912	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	1824	3845	10.0	0	True	AATAAA	-18
PB.639.7	chr1	+	4210	22	novel_in_catalog	ATP1A1	novel	654	5	NA	NA	-16	0	intron_retention	FALSE	canonical	1	1694424	junction_1	1117471.82892752	NA	2	NA	TRUE	NA	NA	NA	C	coding	517	1554	2329	3882	10.0	0	True	AATAAA	-18
PB.639.8	chr1	+	4325	22	novel_in_catalog	ATP1A1	novel	654	5	NA	NA	-15	0	intron_retention	FALSE	canonical	1	1694424	junction_1	1079140.6055438896	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	1229	3997	10.0	1	True	AATAAA	-18
PB.3011.1	chr12	+	2263	3	full-splice_match	BRI3BP	ENST00000341446.8	6648	3	-56	4441	-56	-4441	multi-exon	FALSE	canonical	1	184589	junction_1	47829.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	148	903	65.0	-7	True	NA	NA
PB.3011.2	chr12	+	2422	3	full-splice_match	BRI3BP	ENST00000341446.8	6648	3	-54	4280	-54	-4280	multi-exon	FALSE	canonical	1	184589	junction_1	47829.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	251	756	146	901	80.0	-5	True	NA	NA
PB.11716.7	chr9	-	6881	49	novel_not_in_catalog	ECPAS	novel	7078	49	NA	NA	129	-3	any annotated donor/acceptor	FALSE	canonical	1	15637	junction_1	234310.91886544193	NA	2	1	TRUE	NA	NA	NA	C	coding	1796	5391	92	5482	25.0	1	True	AATAAA	-14
PB.10907.13	chr7	-	2287	10	full-splice_match	PDIA4	ENST00000286091.8	2903	10	109	507	-64	-507	multi-exon	FALSE	canonical	1	1112324	junction_9	539480.0569474278	NA	1	NA	TRUE	NA	NA	NA	C	coding	645	1938	125	2062	35.0	-65	True	NA	NA
PB.10907.12	chr7	-	2294	10	novel_not_in_catalog	PDIA4	novel	2903	10	NA	NA	-35	-389	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	842561.3829539565	NA	1	1	TRUE	NA	NA	NA	C	coding	367	1104	848	1951	25.0	-36	True	NA	NA
PB.10907.11	chr7	-	4235	10	novel_not_in_catalog	PDIA4	novel	2903	10	NA	NA	-56	-389	any annotated donor/acceptor	FALSE	canonical	1	384	junction_3	902780.7626305937	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	117	1310	25.0	-57	True	NA	NA
PB.10907.10	chr7	-	2524	11	novel_in_catalog	PDIA4	novel	2903	10	NA	NA	-34	-384	combination_of_known_junctions	FALSE	canonical	1	2189	junction_10	1033310.5772535962	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	95	2176	15.0	-35	True	NA	NA
PB.12043.1	chrX	+	3694	5	full-splice_match	RP2	ENST00000218340.3	3803	5	102	7	102	-7	multi-exon	FALSE	canonical	1	185232	junction_2	25975.621930716115	NA	0	NA	TRUE	NA	NA	NA	A	coding	350	1053	60	1112	35.0	-1	True	AATAAA	-11
PB.11675.1	chr9	-	1468	6	full-splice_match	XPA	ENST00000375128.4	1417	6	-54	3	-54	-3	multi-exon	FALSE	canonical	1	177151	junction_5	40417.58634357079	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	120	941	15.0	-44	False	AATAAA	-19
PB.11675.2	chr9	-	1617	7	full-splice_match	XPA	ENST00000462523.5	1584	7	-36	3	28	-3	multi-exon	FALSE	canonical	1	17587	junction_1	98503.7021690048	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	38	832	15.0	-11	True	AATAAA	-19
PB.11675.3	chr9	-	4277	1	novel_in_catalog	XPA	novel	1417	6	NA	NA	14	-8106	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	131	396	52	447	85.0	24	False	NA	NA
PB.4309.1	chr16	-	2888	17	full-splice_match	COG7	ENST00000307149.9	2926	17	-37	75	-37	73	multi-exon	FALSE	canonical	1	122218	junction_10	48467.994727835605	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	224	2536	45.0	-46	False	ATTAAA	-16
PB.9623.2	chr5	+	2709	4	full-splice_match	ATP6V0E1	ENST00000519374.5	1433	4	55	-1331	-4	1331	multi-exon	FALSE	canonical	1	1779507	junction_1	467208.73102596117	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	10	True	AATAAA	-18
PB.9623.1	chr5	+	863	4	full-splice_match	ATP6V0E1	ENST00000519374.5	1433	4	14	556	-10	-3	multi-exon	FALSE	canonical	1	1779507	junction_1	467208.73102596117	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-31	True	AATAAA	-21
PB.4309.2	chr16	-	2730	17	full-splice_match	COG7	ENST00000307149.9	2926	17	7	189	7	-41	multi-exon	FALSE	canonical	1	122218	junction_10	48467.994727835605	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	180	2492	70.0	-2	True	NA	NA
PB.5089.5	chr17	+	2757	7	novel_not_in_catalog	UBE2Z	novel	3122	7	NA	NA	26	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	452344.3139322142	NA	2	NA	TRUE	NA	NA	NA	C	coding	138	417	423	839	30.0	16	True	AATAAA	-13
PB.5089.4	chr17	+	2324	8	novel_not_in_catalog	UBE2Z	novel	3122	7	NA	NA	38	-715	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	368571.73608984955	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	379	1119	60.0	0	True	NA	NA
PB.5089.7	chr17	+	2737	7	full-splice_match	UBE2Z	ENST00000360943.9	3122	7	383	2	36	0	multi-exon	FALSE	canonical	1	407693	junction_1	240577.23869823318	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	77	817	25.0	-7320	False	AATAAA	-15
PB.5089.6	chr17	+	2646	6	novel_in_catalog	UBE2Z	novel	3122	7	NA	NA	-63	-2	combination_of_known_junctions	FALSE	canonical	1	28281	junction_2	407636.16939540586	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	429	728	30.0	-7419	False	AATAAA	-13
PB.5089.1	chr17	+	2944	8	novel_not_in_catalog	UBE2Z	novel	3122	7	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	368571.73608984955	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	152	1024	25.0	0	True	AATAAA	-15
PB.4288.8	chr16	-	925	2	incomplete-splice_match	KNOP1	ENST00000565844.1	1394	4	13	3918	12	621	3prime_fragment	FALSE	canonical	1	235205	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	858	68	925	75.0	-19	True	AAAAAG	-37
PB.5089.3	chr17	+	2970	8	novel_not_in_catalog	UBE2Z	novel	3122	7	NA	NA	7	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	368571.73608984955	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	306	1046	15.0	-3	True	AATAAA	-19
PB.5089.2	chr17	+	4368	8	novel_not_in_catalog	UBE2Z	novel	3122	7	NA	NA	15	1304	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	368571.73608984955	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	402	1142	60.0	-7688	False	AATAAA	-43
PB.4288.5	chr16	-	2198	5	novel_not_in_catalog	KNOP1	novel	6432	5	NA	NA	-34	2	any annotated donor/acceptor	FALSE	canonical	1	9934	junction_4	72699.71744443028	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	86	1642	20.0	-1	True	NA	NA
PB.4288.4	chr16	-	2011	5	full-splice_match	KNOP1	ENST00000219837.11	6432	5	6	4415	6	7	multi-exon	FALSE	canonical	1	88251	junction_1	53793.398685967964	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	74	1450	15.0	-25	True	NA	NA
PB.4288.7	chr16	-	1511	5	full-splice_match	KNOP1	ENST00000219837.11	6432	5	27	4894	27	337	multi-exon	FALSE	canonical	1	88251	junction_1	53793.398685967964	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	53	1429	45.0	-4	True	NA	NA
PB.4288.6	chr16	-	2105	6	novel_not_in_catalog	KNOP1	novel	6432	5	NA	NA	42	2	any annotated donor/acceptor	FALSE	canonical	1	7514	junction_5	75883.72302569241	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	173	1549	20.0	11	True	NA	NA
PB.4288.1	chr16	-	4761	5	full-splice_match	KNOP1	ENST00000219837.11	6432	5	26	1645	26	-1645	multi-exon	FALSE	canonical	1	88251	junction_1	53793.398685967964	NA	1	NA	TRUE	NA	NA	NA	C	coding	458	1377	54	1430	75.0	-5	True	NA	NA
PB.5089.8	chr17	+	2597	5	full-splice_match	UBE2Z	ENST00000513342.5	4250	5	1653	0	1653	0	multi-exon	FALSE	canonical	1	901857	junction_3	63933.38942016136	NA	2	NA	TRUE	NA	NA	NA	C	coding	187	564	114	677	25.0	-3240	False	AATAAA	-15
PB.4288.3	chr16	-	2767	1	incomplete-splice_match	KNOP1	ENST00000219837.11	6432	5	11889	1645	5746	-1645	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	8302	False	NA	NA
PB.4288.2	chr16	-	4695	4	novel_in_catalog	KNOP1	novel	6432	5	NA	NA	23	-1645	combination_of_known_junctions	FALSE	canonical	1	32195	junction_2	85602.96811572729	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	57	1364	75.0	-8	True	NA	NA
PB.5782.9	chr19	+	3054	17	incomplete-splice_match	ADGRE5	ENST00000358600.7	2751	18	225	-446	16	0	intron_retention	FALSE	canonical	1	6493	junction_5	246878.4812539913	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	144	2603	15.0	-973	False	ATTAAA	-14
PB.5782.8	chr19	+	3032	19	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	319420.464409253	NA	3	NA	TRUE	NA	NA	NA	C	coding	760	2283	150	2432	15.0	-979	False	ATTAAA	-14
PB.442.3	chr1	+	3133	10	full-splice_match	NFIA	ENST00000371187.7	2683	10	-49	-401	-49	401	multi-exon	FALSE	canonical	1	34638	junction_9	38011.455951860706	NA	3	NA	TRUE	NA	NA	NA	C	coding	498	1497	221	1717	90.0	-49	True	AAAAAG	-31
PB.6672.1	chr2	-	3474	1	full-splice_match	AC012360.3	ENST00000610036.1	3449	1	-32	7	-32	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-15	True	AATATA	-15
PB.471.3	chr1	-	2765	14	novel_in_catalog	LRRC40	novel	2884	15	NA	NA	41	-4	no_combination_of_known_junctions	FALSE	canonical	1	6089	junction_12	70600.90935188872	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	620	1774	25.0	-20	True	AATAAA	-45
PB.5782.1	chr19	+	3072	18	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	44	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	299195.46853422053	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	325	2472	15.0	26	True	ATTAAA	-14
PB.7602.12	chr22	-	2927	9	incomplete-splice_match	DGCR2	ENST00000263196.11	4480	10	42	3447	-5	-1896	3prime_fragment	FALSE	non_canonical	0	0	junction_6	156108.74603441506	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	207	1610	75.0	-1	True	NA	NA
PB.5782.2	chr19	+	2909	18	full-splice_match	ADGRE5	ENST00000358600.7	2751	18	288	-446	0	0	multi-exon	FALSE	canonical	1	6493	junction_5	261111.97914848215	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	81	2309	15.0	0	True	ATTAAA	-14
PB.5782.5	chr19	+	3074	19	full-splice_match	ADGRE5	ENST00000357355.7	3054	19	-19	-1	0	1	multi-exon	FALSE	canonical	1	6493	junction_6	289390.92646625947	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	109	2469	0.0	4	True	ATTAAA	-19
PB.5782.4	chr19	+	2922	18	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	4	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	333736.7074759366	NA	5	NA	TRUE	NA	NA	NA	C	coding	505	1518	365	1882	20.0	-14	True	ATTAAA	-12
PB.5782.7	chr19	+	3286	20	full-splice_match	ADGRE5	ENST00000242786.5	3188	20	-98	0	-19	0	multi-exon	FALSE	canonical	1	479	junction_6	312411.95048596204	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	179	2686	15.0	-1008	False	ATTAAA	-14
PB.5782.6	chr19	+	2894	18	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	-95	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	302808.8145191244	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	255	1679	20.0	-1084	False	ATTAAA	-12
PB.3720.1	chr15	-	3197	4	novel_in_catalog	NBEAP1	novel	979	8	NA	NA	-67742	66	no_combination_of_known_junctions	FALSE	canonical	1	2704	junction_3	18479.821914726344	NA	2	NA	TRUE	NA	NA	NA	A	coding	100	303	207	509	30.0	NA	False	AATAAA	-35
PB.238.23	chr1	-	4752	1	genic	LAPTM5	novel	NA	NA	NA	NA	-29	-11409	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-1	True	TTTAAA	-5
PB.238.24	chr1	-	2420	1	novel_in_catalog	LAPTM5	novel	2223	8	NA	NA	2240	-11409	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	2554	False	TTTAAA	-5
PB.10149.17	chr6	-	4857	5	incomplete-splice_match	CD164	ENST00000512821.5	964	6	-55	-1297	-8	-6	intron_retention	TRUE	canonical	1	9783	junction_1	1024056.088734737	NA	26	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	AATAAA	-12
PB.2521.13	chr12	+	2826	4	full-splice_match	PPFIBP1	ENST00000545334.5	2805	4	1	-22	1	22	multi-exon	FALSE	canonical	1	167685	junction_1	22846.813052735968	NA	4	NA	TRUE	NA	NA	NA	C	coding	108	327	334	660	20.0	-47	True	GATAAA	-42
PB.2521.12	chr12	+	2885	5	novel_not_in_catalog	PPFIBP1	novel	609	5	NA	NA	-2	21	any annotated donor/acceptor	FALSE	canonical	1	4032	junction_3	97707.30938976623	NA	4	NA	TRUE	NA	NA	NA	C	coding	108	327	394	720	20.0	-50	True	GATAAA	-41
PB.9483.37	chr5	+	2710	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	98290	junction_1	1095960.3592508293	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	167	1696	25.0	-1	True	AATAAA	-22
PB.2521.10	chr12	+	3178	18	novel_not_in_catalog	PPFIBP1	novel	609	5	NA	NA	6	2	any annotated donor/acceptor	FALSE	canonical	1	5317	junction_17	83231.95102698113	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	345	1958	20.0	-58	False	AATAAA	-21
PB.2521.17	chr12	+	3727	28	novel_not_in_catalog	PPFIBP1	novel	609	5	NA	NA	0	218	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	99002.7531244572	NA	3	1	TRUE	NA	NA	NA	C	coding	981	2946	319	3264	15.0	-32	True	ACTAAA	-17
PB.2521.16	chr12	+	5866	28	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	104089	junction_7	78358.67956414935	NA	1	1	TRUE	NA	NA	NA	C	coding	982	2949	237	3185	15.0	50	False	AATAAA	-20
PB.2521.15	chr12	+	5926	27	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	37510	junction_15	89542.01189109188	NA	3	1	TRUE	NA	NA	NA	C	coding	972	2919	327	3245	15.0	-40	True	AATAAA	-20
PB.2521.14	chr12	+	5996	29	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	104089	junction_7	83248.86299409709	NA	2	1	TRUE	NA	NA	NA	C	coding	993	2982	332	3313	15.0	-45	True	AATAAA	-22
PB.5968.3	chr19	-	3659	7	novel_not_in_catalog	ZFP30	novel	444	5	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	25669.679444931826	NA	1	1	TRUE	NA	NA	NA	B	coding	519	1560	294	1853	0.0	-3	True	AATAAA	-12
PB.2521.19	chr12	+	5622	26	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	8720	junction_2	93228.73690594763	NA	1	NA	TRUE	NA	NA	NA	C	coding	830	2493	449	2941	15.0	-11	True	AATAAA	-20
PB.2521.18	chr12	+	3001	27	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	1	104089	junction_7	69817.24832114264	NA	3	NA	TRUE	NA	NA	NA	C	coding	895	2685	315	2999	60.0	-28	True	AAGAAA	-30
PB.9483.39	chr5	+	5202	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	147046	junction_9	873881.4014702085	NA	2	NA	TRUE	NA	NA	NA	C	coding	895	2688	241	2928	20.0	0	True	AATGAA	-12
PB.9483.38	chr5	+	3587	14	novel_in_catalog	MATR3	novel	3249	17	NA	NA	0	50	intron_retention	FALSE	canonical	1	147046	junction_9	1026399.9382786719	NA	3	NA	TRUE	NA	NA	NA	C	coding	793	2382	241	2622	50.0	0	True	AAGAAA	-19
PB.11455.2	chr9	-	3287	1	novel_in_catalog	DMAC1	novel	2755	2	NA	NA	278	-13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	162	489	56	544	35.0	-12	True	AATAAA	-17
PB.5968.2	chr19	-	3546	7	novel_not_in_catalog	ZFP30	novel	444	5	NA	NA	-27	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	27774.10498057898	NA	1	NA	TRUE	NA	NA	NA	B	coding	519	1560	227	1786	0.0	-30	True	AATAAA	-13
PB.4066.13	chr15	+	4083	38	full-splice_match	FANCI	ENST00000310775.11	4743	38	12	648	4	0	multi-exon	FALSE	canonical	1	88511	junction_1	121361.49651354545	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	75	4061	10.0	0	True	AATAAA	-22
PB.12053.1	chrX	+	792	6	full-splice_match	TIMP1	ENST00000218388.8	892	6	99	1	4	-1	multi-exon	FALSE	canonical	1	5640299	junction_5	626618.7931532216	NA	0	NA	TRUE	NA	NA	NA	A	coding	207	624	72	695	20.0	-4350	False	AATAAA	-16
PB.5968.1	chr19	-	3623	7	novel_not_in_catalog	ZFP30	novel	444	5	NA	NA	0	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	25669.679444931826	NA	1	1	TRUE	NA	NA	NA	B	coding	519	1560	294	1853	10.0	-3	True	AATAAA	-16
PB.11152.33	chr8	-	2855	13	novel_in_catalog	ASPH	novel	5268	25	NA	NA	4	1	no_combination_of_known_junctions	FALSE	canonical	1	45844	junction_1	655838.0045665654	NA	2	1	TRUE	NA	NA	NA	C	coding	298	897	222	1118	30.0	-1	True	AATAAA	-18
PB.10149.20	chr6	-	2198	5	full-splice_match	CD164	ENST00000324953.9	2936	5	-25	763	-12	-2	multi-exon	FALSE	canonical	1	262486	junction_1	910038.5344325742	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	92	628	20.0	-3	True	ATTAAA	-14
PB.10149.21	chr6	-	1907	7	novel_not_in_catalog	CD164	novel	4963	2	NA	NA	-10	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	884852.5991059032	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	90	683	20.0	-1	True	ATTAAA	-13
PB.10149.22	chr6	-	1154	6	full-splice_match	CD164	ENST00000310786.9	3365	6	337	1874	-18	296	multi-exon	FALSE	canonical	1	1733127	junction_4	302048.6974468852	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	98	691	35.0	-9	True	AATAAA	-17
PB.5041.3	chr17	-	2057	4	full-splice_match	CCDC43	ENST00000457422.6	2058	4	1	0	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	155110.75746919253	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	26	490	15.0	-17	True	AATAAA	-40
PB.1891.1	chr11	-	2133	8	novel_in_catalog	APIP	novel	4583	8	NA	NA	-32	8275	combination_of_known_junctions	FALSE	canonical	1	5986	junction_1	74749.96456131847	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	100	828	30.0	-20	True	AATAAA	-28
PB.1982.3	chr11	-	1740	12	full-splice_match	FADS3	ENST00000278829.6	1779	12	37	2	10	-1	multi-exon	FALSE	canonical	1	414995	junction_11	164785.31224556323	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	117	1454	20.0	-12	True	NA	NA
PB.4315.4	chr16	+	1860	10	novel_not_in_catalog	PLK1	novel	4135	9	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	249708.30708248375	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	465	1556	10.0	-20	True	ATTAAA	-16
PB.4315.5	chr16	+	2126	11	novel_not_in_catalog	PLK1	novel	4135	9	NA	NA	2	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	239403.95214659674	NA	18	NA	TRUE	NA	NA	NA	C	coding	586	1761	63	1823	10.0	-19	True	ATTAAA	-15
PB.4315.2	chr16	+	2285	10	novel_in_catalog	PLK1	novel	4135	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	22632	junction_9	241883.45525530865	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1695	75	1769	10.0	-6142	False	ATTAAA	-15
PB.4315.3	chr16	+	2677	9	novel_in_catalog	PLK1	novel	4135	9	NA	NA	-5	0	intron_retention	TRUE	canonical	1	405416	junction_6	147778.89435466588	NA	14	1	TRUE	NA	NA	NA	C	coding	438	1317	70	1386	10.0	-26	True	ATTAAA	-16
PB.4315.1	chr16	+	1816	10	full-splice_match	PLK1	ENST00000300093.8	2227	10	411	0	262	0	multi-exon	FALSE	canonical	1	405416	junction_6	152594.6808340301	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	421	1512	10.0	-5768	False	ATTAAA	-16
PB.4066.17	chr15	+	5380	37	novel_in_catalog	FANCI	novel	4713	37	NA	NA	7	0	intron_retention	FALSE	canonical	1	88511	junction_1	119421.54074564624	NA	2	NA	TRUE	NA	NA	NA	C	coding	741	2226	3133	5358	10.0	3	True	AATAAA	-22
PB.4066.16	chr15	+	4495	37	novel_in_catalog	FANCI	novel	4713	37	NA	NA	7	-86	combination_of_known_junctions	FALSE	canonical	1	16904	junction_23	139066.25420483592	NA	2	NA	TRUE	NA	NA	NA	C	coding	1268	3807	106	3912	25.0	3	True	AATAGA	-19
PB.12252.12	chrX	-	2525	23	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	8	17753	6	-4438	3prime_fragment	FALSE	canonical	1	228109	junction_21	49140.1900317385	NA	0	NA	TRUE	NA	NA	NA	B	coding	833	2499	27	2525	65.0	-3	True	NA	NA
PB.12252.13	chrX	-	2395	8	novel_in_catalog	THOC2	novel	5609	39	NA	NA	3	111	intron_retention	FALSE	canonical	1	228109	junction_6	36784.64699921889	NA	0	NA	TRUE	NA	NA	NA	B	coding	118	357	13	369	75.0	11	True	NA	NA
PB.12252.10	chrX	-	3405	28	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	9	13712	7	-397	3prime_fragment	FALSE	canonical	1	228109	junction_26	68699.60708547186	NA	0	NA	TRUE	NA	NA	NA	B	coding	1126	3378	26	3403	40.0	-2	True	AATATA	-29
PB.12252.11	chrX	-	2789	23	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	2	17495	0	-4180	3prime_fragment	FALSE	canonical	1	228109	junction_21	49140.1900317385	NA	1	NA	TRUE	NA	NA	NA	B	coding	919	2757	33	2789	15.0	-9	True	AATAAA	-43
PB.8852.2	chr4	+	2971	5	full-splice_match	THAP9	ENST00000302236.9	3808	5	-61	898	7	-389	multi-exon	FALSE	canonical	1	27892	junction_1	5527.848225123407	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	113	2824	30.0	-44	True	ATTAAA	-21
PB.3975.3	chr15	+	2879	9	full-splice_match	ARID3B	ENST00000346246.9	4271	9	48	1344	19	-1190	multi-exon	FALSE	canonical	1	1585	junction_7	15016.660470540712	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	184	1866	10.0	5	True	NA	NA
PB.3975.2	chr15	+	2521	8	incomplete-splice_match	ARID3B	ENST00000622429.1	4243	9	12	4084	12	844	3prime_fragment	FALSE	canonical	1	1731	junction_7	15871.610142975798	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	191	1804	90.0	-2	True	NA	NA
PB.197.8	chr1	+	1202	6	full-splice_match	HMGN2	ENST00000361427.5	1191	6	-13	2	0	0	multi-exon	FALSE	canonical	1	3908	junction_5	412333.80061954656	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-728	False	AATAAA	-22
PB.3975.7	chr15	+	5342	8	novel_in_catalog	ARID3B	novel	4271	9	NA	NA	-13	0	intron_retention	FALSE	canonical	1	1585	junction_6	13742.242140976285	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	158	1042	20.0	-6	True	AATAAA	-18
PB.3975.6	chr15	+	4210	9	full-splice_match	ARID3B	ENST00000346246.9	4271	9	59	2	-28	0	multi-exon	FALSE	canonical	1	1585	junction_7	15016.660470540712	NA	1	NA	TRUE	NA	NA	NA	C	coding	560	1683	173	1855	20.0	-516	False	AATAAA	-18
PB.3975.5	chr15	+	4337	8	novel_in_catalog	ARID3B	novel	4271	9	NA	NA	26	-2	intron_retention	FALSE	canonical	1	1585	junction_6	15547.555874589078	NA	2	NA	TRUE	NA	NA	NA	C	coding	435	1308	177	1484	25.0	-520	False	AATAAA	-16
PB.3975.4	chr15	+	5494	7	novel_in_catalog	ARID3B	novel	4271	9	NA	NA	19	1	intron_retention	FALSE	canonical	1	1585	junction_5	13722.908887452884	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	184	1068	15.0	5	True	AATAAA	-19
PB.390.2	chr1	-	2780	4	full-splice_match	MOB3C	ENST00000319928.7	2822	4	36	6	29	-2	multi-exon	FALSE	canonical	1	58372	junction_3	16512.937493573536	NA	1	NA	TRUE	NA	NA	NA	A	coding	216	651	196	846	20.0	-23	True	AATAAA	-14
PB.9204.1	chr5	-	2074	5	full-splice_match	SELENOP	ENST00000514985.5	2243	5	168	1	-18	-1	multi-exon	FALSE	canonical	1	1662783	junction_3	321735.5566711581	NA	0	NA	TRUE	NA	NA	NA	A	coding	100	303	634	936	15.0	150	False	AATAAA	-23
PB.5508.22	chr18	-	3948	1	full-splice_match	BCL2	ENST00000589955.2	5011	1	-1263	2326	53	-2326	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	205	618	1410	2027	35.0	-21	True	AGTAAA	-19
PB.10535.1	chr7	+	6516	1	incomplete-splice_match	ADCY1	ENST00000297323.11	12503	20	139476	2603	29613	-2603	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	104	315	5085	5399	95.0	NA	False	NA	NA
PB.10535.2	chr7	+	5367	1	incomplete-splice_match	ADCY1	ENST00000297323.11	12503	20	140626	2602	30763	-2602	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	104	315	3935	4249	90.0	NA	False	NA	NA
PB.5508.23	chr18	-	3106	1	full-splice_match	BCL2	ENST00000589955.2	5011	1	-1265	3170	51	-3170	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	205	618	1412	2029	40.0	-23	True	NA	NA
PB.10535.4	chr7	+	2154	1	incomplete-splice_match	ADCY1	ENST00000297323.11	12503	20	143838	2603	33975	-2603	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	723	1037	95.0	NA	False	NA	NA
PB.197.5	chr1	+	3308	3	novel_in_catalog	HMGN2	novel	320	4	NA	NA	2	668	intron_retention	FALSE	canonical	1	3908	junction_2	53784.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	136	411	1443	1853	15.0	1	True	AATAAA	-15
PB.3098.10	chr13	-	1987	5	novel_in_catalog	N4BP2L2	novel	2917	10	NA	NA	0	-129	intron_retention	FALSE	canonical	1	7199	junction_3	288335.99532782496	NA	18	NA	TRUE	NA	NA	NA	C	coding	434	1305	176	1480	25.0	-1	True	AATAAA	-21
PB.10996.1	chr8	+	1465	6	incomplete-splice_match	PDGFRL	ENST00000251630.10	1901	7	787	28	787	-28	5prime_fragment	FALSE	canonical	1	78581	junction_3	25892.029216730003	NA	0	NA	TRUE	NA	NA	NA	A	coding	375	1128	34	1161	60.0	4	True	ATTAAA	-14
PB.8852.3	chr4	+	3982	6	novel_in_catalog	THAP9	novel	553	4	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	6995	junction_5	14996.680760755027	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	1076	2938	20.0	-43	True	ATTAAA	-17
PB.10126.7	chr6	-	2084	12	full-splice_match	CCNC	ENST00000520429.5	2473	12	313	76	0	46	multi-exon	FALSE	canonical	1	427995	junction_11	179380.2402127765	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	134	985	30.0	-1	True	ATTAAA	-20
PB.3098.12	chr13	-	1977	6	novel_not_in_catalog	N4BP2L2	novel	2917	10	NA	NA	-3	-135	any annotated donor/acceptor	TRUE	canonical	1	6645	junction_5	249169.53898307876	NA	3	1	TRUE	NA	NA	NA	C	coding	583	1752	47	1798	30.0	-4	True	AATAAA	-15
PB.197.2	chr1	+	2256	3	incomplete-splice_match	HMGN2	ENST00000479815.5	1030	4	-39	-742	-26	0	intron_retention	FALSE	canonical	1	111477	junction_2	496662.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	121	366	616	981	15.0	-27	True	AATAAA	-22
PB.2870.1	chr12	+	2454	15	full-splice_match	PWP1	ENST00000412830.7	2621	15	161	6	85	-6	multi-exon	FALSE	canonical	1	460044	junction_7	142767.02630189763	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	8	1513	15.0	0	True	ATTAAA	-14
PB.2870.2	chr12	+	1804	15	full-splice_match	PWP1	ENST00000412830.7	2621	15	124	693	48	62	multi-exon	FALSE	canonical	1	460044	junction_7	142767.02630189763	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	45	1550	40.0	-37	False	AATAAA	-26
PB.2870.3	chr12	+	2846	15	full-splice_match	PWP1	ENST00000412830.7	2621	15	66	-291	-4	291	multi-exon	TRUE	canonical	1	460044	junction_7	142767.02630189763	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	103	1608	25.0	-12	True	AATAAA	-21
PB.618.3	chr1	-	2477	15	full-splice_match	ST7L	ENST00000358039.8	4528	15	288	1763	-4	1	multi-exon	FALSE	canonical	1	43034	junction_1	39294.57786062726	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	18	1745	15.0	-6	True	AATAAA	-21
PB.618.2	chr1	-	4257	15	full-splice_match	ST7L	ENST00000358039.8	4528	15	268	3	-6	-3	multi-exon	TRUE	canonical	1	43034	junction_1	39294.57786062726	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	38	1765	40.0	533	False	AATAAA	-24
PB.618.1	chr1	-	4194	15	full-splice_match	ST7L	ENST00000490067.5	1780	15	55	-2469	-8	1	multi-exon	TRUE	canonical	1	8916	junction_14	42248.80476615128	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	22	1698	25.0	-10	True	AATAAA	-28
PB.11241.10	chr8	-	3658	15	incomplete-splice_match	VIRMA	ENST00000297591.9	6528	24	57	22235	57	-171	3prime_fragment	FALSE	canonical	1	184214	junction_12	44146.35782773118	NA	0	NA	TRUE	NA	NA	NA	C	coding	1213	3639	20	3658	60.0	0	True	ACTAAA	-33
PB.9137.3	chr5	+	3237	15	full-splice_match	MTRR	ENST00000513439.5	2441	15	44	-840	0	0	multi-exon	FALSE	canonical	1	3980	junction_3	94453.38036214867	NA	21	3	TRUE	NA	NA	NA	C	coding	157	474	1703	2176	30.0	0	True	AATAAA	-25
PB.9137.2	chr5	+	3282	15	novel_not_in_catalog	MTRR	novel	711	4	NA	NA	-5	1	intron_retention	FALSE	canonical	1	1501	junction_13	96118.33023180865	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	99	1916	30.0	-5	True	AATAAA	-26
PB.9137.1	chr5	+	2597	15	full-splice_match	MTRR	ENST00000440940.6	3215	15	-55	673	-14	172	multi-exon	FALSE	canonical	1	89262	junction_1	71221.81580854511	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	108	2204	60.0	-9726	False	NA	NA
PB.9137.7	chr5	+	3205	15	full-splice_match	MTRR	ENST00000440940.6	3215	15	5	5	0	0	multi-exon	FALSE	canonical	1	89262	junction_1	71221.81580854511	NA	1	NA	TRUE	NA	NA	NA	C	coding	698	2097	48	2144	30.0	46	True	AATAAA	-25
PB.9137.6	chr5	+	4602	15	novel_not_in_catalog	MTRR	novel	711	4	NA	NA	11	1	intron_retention	FALSE	canonical	1	4747	junction_13	112919.43609785767	NA	4	NA	TRUE	NA	NA	NA	C	coding	156	471	1552	2022	30.0	11	True	AATAAA	-26
PB.9137.5	chr5	+	3257	15	novel_in_catalog	MTRR	novel	711	4	NA	NA	2	5	intron_retention	FALSE	canonical	1	22384	junction_8	101264.42788631581	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	1713	2186	15.0	2	True	AATAAA	-35
PB.9137.4	chr5	+	3121	14	novel_not_in_catalog	MTRR	novel	711	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	6081	junction_7	99520.89674158147	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	1586	2059	30.0	0	True	AATAAA	-26
PB.746.17	chr1	-	3368	12	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	20640	junction_1	230034.24510118648	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	180	2648	15.0	-22	True	AATAAA	-15
PB.746.16	chr1	-	3725	12	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	14652	junction_1	221543.59186787374	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	631	2889	15.0	-2	True	AATAAA	-15
PB.746.15	chr1	-	3495	12	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	24416	junction_11	212050.53776247628	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	370	2775	15.0	-39	True	AATAAA	-15
PB.746.14	chr1	-	3794	13	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	20640	junction_1	252790.53346764029	NA	0	NA	TRUE	NA	NA	NA	C	coding	822	2469	606	3074	15.0	-6	True	AATAAA	-15
PB.746.13	chr1	-	3487	12	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	105423	junction_11	186876.24209204948	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	362	2767	15.0	-2	True	AATAAA	-15
PB.746.12	chr1	-	3720	14	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	57828	junction_12	244204.30047287003	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2451	550	3000	15.0	-17	True	AATAAA	-15
PB.746.11	chr1	-	4669	12	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	-7	0	intron_retention	FALSE	canonical	1	57828	junction_10	222566.3147129988	NA	4	1	TRUE	NA	NA	NA	C	coding	764	2295	560	2854	15.0	-27	True	AATAAA	-15
PB.746.10	chr1	-	4781	11	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	4	0	intron_retention	FALSE	canonical	1	105423	junction_10	189085.60235078714	NA	5	NA	TRUE	NA	NA	NA	C	coding	764	2295	672	2966	15.0	-13	True	AATAAA	-15
PB.456.3	chr1	+	4885	19	novel_in_catalog	DNAJC6	novel	546	5	NA	NA	0	-274	combination_of_known_junctions	FALSE	canonical	1	37764	junction_1	44408.39827799787	NA	2	1	TRUE	NA	NA	NA	B	coding	944	2835	74	2908	45.0	0	True	ATTAAA	-21
PB.1662.2	chr10	-	996	3	incomplete-splice_match	CCDC186	ENST00000369287.7	7245	16	17	36705	-1	4041	3prime_fragment	FALSE	canonical	1	108801	junction_2	6374.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	744	251	994	60.0	-1	True	ACTAAA	-34
PB.3496.15	chr14	+	2471	17	incomplete-splice_match	MTHFD1	ENST00000216605.12	3136	28	3	20110	3	518	3prime_fragment	FALSE	canonical	1	58134	junction_10	249280.54514580054	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	76	1794	100.0	0	True	NA	NA
PB.3496.14	chr14	+	3503	28	novel_in_catalog	MTHFD1	novel	6814	27	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	1	3646	junction_1	265255.39989942237	NA	2	1	TRUE	NA	NA	NA	C	coding	854	2565	687	3251	25.0	-9	True	AATAAA	-19
PB.3496.13	chr14	+	3242	29	novel_not_in_catalog	MTHFD1	novel	6814	27	NA	NA	-7	3	any annotated donor/acceptor	FALSE	canonical	1	2363	junction_3	269202.4335123182	NA	0	NA	TRUE	NA	NA	NA	C	coding	967	2904	86	2989	25.0	-10	True	AATAAA	-20
PB.3496.12	chr14	+	3274	29	novel_in_catalog	MTHFD1	novel	6814	27	NA	NA	-7	0	no_combination_of_known_junctions	FALSE	canonical	1	2316	junction_2	275810.01672014577	NA	1	NA	TRUE	NA	NA	NA	C	coding	854	2565	460	3024	25.0	-10	True	AATAAA	-17
PB.3496.11	chr14	+	3699	22	incomplete-splice_match	MTHFD1	ENST00000216605.12	3136	28	-7	13834	-7	1032	3prime_fragment	FALSE	canonical	1	58134	junction_10	253134.13562698147	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	86	2272	30.0	-10	True	ATTAAA	-15
PB.1662.3	chr10	-	2043	3	full-splice_match	CCDC186	ENST00000369285.7	2035	3	-10	2	8	-2	multi-exon	FALSE	canonical	1	46629	junction_2	2133.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	385	1020	25.0	-10	True	AATAAA	-20
PB.2857.1	chr12	-	7552	23	full-splice_match	ALDH1L2	ENST00000258494.13	7547	23	0	-5	0	-1	multi-exon	FALSE	canonical	1	27323	junction_22	16267.857116892188	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	142	2913	30.0	-1	True	NA	NA
PB.2857.3	chr12	-	3122	1	incomplete-splice_match	ALDH1L2	ENST00000549335.5	7403	19	43693	7	9023	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1030	False	NA	NA
PB.2857.5	chr12	-	2785	17	novel_not_in_catalog	ALDH1L2	novel	7403	19	NA	NA	3635	199	any annotated donor/acceptor	FALSE	canonical	1	1553	junction_11	21568.174622776813	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	1450	2586	20.0	NA	False	AATACA	-17
PB.2857.4	chr12	-	3136	23	full-splice_match	ALDH1L2	ENST00000258494.13	7547	23	-24	4435	-24	199	multi-exon	FALSE	canonical	1	27323	junction_22	16267.857116892188	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	166	2937	20.0	-2	True	AATACA	-17
PB.7507.3	chr21	-	2577	3	full-splice_match	RCAN1	ENST00000492600.1	935	3	0	-1642	0	1642	multi-exon	FALSE	canonical	1	253402	junction_2	101037.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	76	693	100.0	-3	True	NA	NA
PB.4722.20	chr17	+	2934	17	novel_in_catalog	ACADVL	novel	2227	21	NA	NA	6	0	intron_retention	FALSE	canonical	1	648871	junction_1	828498.7915139397	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1953	2765	5.0	-24	True	AATAAA	-17
PB.8852.1	chr4	+	3787	5	full-splice_match	THAP9	ENST00000302236.9	3808	5	20	1	3	-1	multi-exon	FALSE	canonical	1	27892	junction_1	5527.848225123407	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	32	2743	20.0	-425	False	ATTAAA	-17
PB.5508.19	chr18	-	4679	1	full-splice_match	BCL2	ENST00000589955.2	5011	1	-1222	1554	94	-1554	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	205	618	1369	1986	25.0	20	True	AATAAA	-12
PB.5508.18	chr18	-	4502	2	incomplete-splice_match	BCL2	ENST00000333681.4	3209	3	-292	188321	50	-1554	3prime_fragment	FALSE	canonical	1	122770	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	1192	1809	25.0	-24	True	AATAAA	-12
PB.2521.9	chr12	+	5971	28	full-splice_match	PPFIBP1	ENST00000542629.5	3208	28	-79	-2684	3	2	multi-exon	FALSE	canonical	1	82268	junction_11	82094.47130495151	NA	2	NA	TRUE	NA	NA	NA	C	coding	979	2940	348	3287	15.0	-61	False	AATAAA	-23
PB.2521.8	chr12	+	3007	26	novel_not_in_catalog	PPFIBP1	novel	609	5	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	77269.61710443244	NA	6	3	TRUE	NA	NA	NA	C	coding	517	1554	350	1903	60.0	-63	False	AAGAAA	-30
PB.8589.13	chr3	+	3652	6	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	1	4178	junction_2	316243.74241296854	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	377	904	15.0	10	True	AATAAA	-18
PB.10807.4	chr7	+	2082	11	full-splice_match	ING3	ENST00000427726.5	1718	11	-6	-358	-6	358	multi-exon	FALSE	canonical	1	26944	junction_4	65800.38582288101	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	700	1278	45.0	2	True	AATAAA	-7
PB.8589.11	chr3	+	3943	7	full-splice_match	ST6GAL1	ENST00000457772.6	3947	7	1	3	1	-1	multi-exon	FALSE	canonical	1	4178	junction_3	283486.8399922747	NA	1	NA	TRUE	NA	NA	NA	C	coding	175	528	669	1196	10.0	-9	True	AATAAA	-17
PB.8589.10	chr3	+	4462	7	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1712	junction_1	246198.76640796877	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	492	1712	5.0	-10	True	AATAAA	-20
PB.2521.3	chr12	+	5631	29	novel_not_in_catalog	PPFIBP1	novel	609	5	NA	NA	-11	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_28	90600.28000172837	NA	3	NA	TRUE	NA	NA	NA	C	coding	982	2949	362	3310	15.0	-75	False	AATAAA	-20
PB.2521.2	chr12	+	3582	28	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-13	25	combination_of_known_junctions	TRUE	canonical	1	104089	junction_7	78358.67956414935	NA	1	1	TRUE	NA	NA	NA	C	coding	982	2949	364	3312	25.0	-77	False	TTTAAA	-17
PB.2521.1	chr12	+	3808	29	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-13	218	combination_of_known_junctions	FALSE	canonical	1	104089	junction_7	83248.86299409709	NA	2	NA	TRUE	NA	NA	NA	C	coding	993	2982	364	3345	15.0	-77	False	ACTAAA	-17
PB.5508.12	chr18	-	2335	2	novel_not_in_catalog	BCL2	novel	7461	2	NA	NA	23238	241	any annotated donor/acceptor	FALSE	canonical	1	4455	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	1	324	15.0	-219	False	AATACA	-16
PB.2521.7	chr12	+	4977	29	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	0	-1036	combination_of_known_junctions	FALSE	canonical	1	104089	junction_7	83248.86299409709	NA	1	1	TRUE	NA	NA	NA	C	coding	993	2982	351	3332	30.0	-64	False	AAAAAG	-4
PB.2521.6	chr12	+	5646	25	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	8720	junction_2	103627.08718738894	NA	5	NA	TRUE	NA	NA	NA	C	coding	820	2463	503	2965	15.0	-65	False	AATAAA	-20
PB.2521.5	chr12	+	2974	25	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	1	37510	junction_15	80653.6848744457	NA	23	1	TRUE	NA	NA	NA	C	coding	871	2613	360	2972	60.0	-73	False	AAGAAA	-30
PB.2521.4	chr12	+	3503	28	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-9	-44	combination_of_known_junctions	FALSE	canonical	1	37510	junction_15	96258.87086945145	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	360	3302	20.0	-73	False	NA	NA
PB.464.1	chr1	+	3719	16	novel_in_catalog	IL12RB2	novel	4040	16	NA	NA	-33	36	no_combination_of_known_junctions	FALSE	canonical	1	1400	junction_12	8547.261366205097	NA	4	NA	TRUE	NA	NA	NA	B	coding	809	2430	253	2682	95.0	-33	False	NA	NA
PB.464.2	chr1	+	3766	16	novel_in_catalog	IL12RB2	novel	4040	16	NA	NA	-13	36	no_combination_of_known_junctions	FALSE	canonical	1	1972	junction_1	6933.222310008528	NA	3	1	TRUE	NA	NA	NA	B	coding	862	2589	141	2729	95.0	-13	True	NA	NA
PB.9385.1	chr5	+	3052	11	full-splice_match	CAMK4	ENST00000282356.8	12240	11	321	8867	-2	424	multi-exon	FALSE	canonical	1	72639	junction_2	16495.095184933005	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	78	1499	55.0	21	True	AATAAA	-24
PB.464.4	chr1	+	3843	17	novel_in_catalog	IL12RB2	novel	4040	16	NA	NA	2	36	combination_of_known_junctions	FALSE	canonical	1	5255	junction_1	6975.240604889106	NA	0	NA	TRUE	NA	NA	NA	B	coding	862	2589	218	2806	95.0	2	True	NA	NA
PB.2770.1	chr12	-	3572	15	full-splice_match	NAP1L1	ENST00000618691.4	13505	15	348	9585	0	732	multi-exon	FALSE	canonical	1	954408	junction_4	1405557.257375595	NA	5	NA	TRUE	NA	NA	NA	C	coding	391	1176	140	1315	15.0	-1	True	AATAAA	-25
PB.10066.17	chr6	-	3548	7	full-splice_match	TMEM30A	ENST00000230461.10	4594	7	192	854	172	-165	multi-exon	FALSE	canonical	1	945065	junction_3	75509.6291585826	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	139	1224	40.0	3	True	CATAAA	-6
PB.5782.10	chr19	+	2370	16	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	313883.7137811815	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	101	1330	20.0	12	True	ATTAAA	-12
PB.11961.1	chrX	+	3589	23	novel_not_in_catalog	WWC3	novel	6647	23	NA	NA	46373	-2860	any annotated donor/acceptor	FALSE	canonical	1	26	junction_1	41162.746695533584	NA	6	1	TRUE	NA	NA	NA	B	coding	1092	3279	194	3472	85.0	NA	False	AATATA	-11
PB.11961.2	chrX	+	3095	17	novel_not_in_catalog	WWC3	novel	6647	23	NA	NA	81995	-2860	any annotated donor/acceptor	FALSE	canonical	1	802	junction_1	47251.13607128768	NA	0	NA	TRUE	NA	NA	NA	B	coding	756	2271	708	2978	85.0	-5968	False	AATATA	-11
PB.11961.3	chrX	+	2848	16	incomplete-splice_match	WWC3	ENST00000380861.8	6647	23	82835	2860	82602	-2860	5prime_fragment	FALSE	canonical	1	89947	junction_4	32114.94527571582	NA	0	NA	TRUE	NA	NA	NA	B	coding	756	2271	461	2731	85.0	2	True	AATATA	-11
PB.11961.5	chrX	+	2513	15	novel_not_in_catalog	WWC3	novel	6647	23	NA	NA	94534	-2860	any annotated donor/acceptor	FALSE	canonical	1	221	junction_1	48866.14596835953	NA	0	NA	TRUE	NA	NA	NA	B	coding	756	2271	126	2396	85.0	6571	False	AATATA	-11
PB.1201.6	chr1	+	2681	6	novel_not_in_catalog	TSNAX	novel	2650	6	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	1	1774	junction_5	203967.66663508213	NA	12	1	TRUE	NA	NA	NA	C	coding	198	597	137	733	15.0	0	True	AATAAA	-18
PB.9262.2	chr5	+	3761	16	full-splice_match	PIK3R1	ENST00000521381.5	7011	16	160	3090	104	-22	multi-exon	FALSE	canonical	1	143890	junction_1	144150.21405180855	NA	2	1	TRUE	NA	NA	NA	C	coding	724	2175	457	2631	80.0	70	False	NA	NA
PB.9262.3	chr5	+	3434	16	full-splice_match	PIK3R1	ENST00000521381.5	7011	16	12	3565	12	-327	multi-exon	TRUE	canonical	1	143890	junction_1	144150.21405180855	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	605	2779	50.0	-30	True	AAAACA	-16
PB.9262.1	chr5	+	2087	12	incomplete-splice_match	PIK3R1	ENST00000521381.5	7011	16	1	7239	1	-30	3prime_fragment	FALSE	canonical	1	143890	junction_1	89869.75833453341	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1470	616	2085	55.0	-41	True	AATGAA	-34
PB.9262.6	chr5	+	3504	16	full-splice_match	PIK3R1	ENST00000521381.5	7011	16	47	3460	-9	-222	multi-exon	FALSE	canonical	1	143890	junction_1	144150.21405180855	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2175	570	2744	20.0	5	True	AATAGA	-19
PB.1648.8	chr10	+	953	11	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	4	21226	4	1404	3prime_fragment	FALSE	canonical	1	324823	junction_2	149723.7713826365	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	831	123	953	55.0	0	True	NA	NA
PB.1648.9	chr10	+	4067	28	novel_in_catalog	SMC3	novel	4114	29	NA	NA	4	-4	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_18	274934.4737150245	NA	1	NA	TRUE	NA	NA	NA	C	coding	1204	3615	123	3737	25.0	0	True	ATTAAA	-18
PB.1648.6	chr10	+	1491	14	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	4	14968	4	7662	3prime_fragment	FALSE	canonical	1	324823	junction_2	178686.30121177604	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1368	123	1490	70.0	0	True	AATGAA	-41
PB.1648.7	chr10	+	1282	13	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	4	20385	4	2245	3prime_fragment	FALSE	canonical	1	324823	junction_2	185975.6185485636	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1158	123	1280	60.0	0	True	NA	NA
PB.1648.4	chr10	+	4053	29	full-splice_match	SMC3	ENST00000361804.4	4114	29	58	3	58	-3	multi-exon	FALSE	non_canonical	0	0	junction_19	255715.1926666179	NA	0	NA	TRUE	NA	NA	NA	C	coding	1217	3654	69	3722	20.0	-27	False	ATTAAA	-19
PB.1648.5	chr10	+	2925	24	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	0	2845	0	-2845	3prime_fragment	FALSE	non_canonical	0	0	junction_19	194427.69250825144	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2799	127	2925	55.0	-4	True	ACTAAA	-40
PB.1648.2	chr10	+	2741	23	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	-8	3543	-8	-3543	3prime_fragment	FALSE	non_canonical	0	0	junction_19	196148.1793190013	NA	0	NA	TRUE	NA	NA	NA	C	coding	869	2607	135	2741	65.0	-12	True	NA	NA
PB.1648.3	chr10	+	3129	25	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	-7	2567	-7	-2567	3prime_fragment	FALSE	non_canonical	0	0	junction_19	196967.8720187168	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2994	134	3127	45.0	-11	True	AAAAAG	-42
PB.7079.8	chr2	+	5415	31	novel_not_in_catalog	DGKD	novel	6297	30	NA	NA	-52	-2055	any annotated donor/acceptor	FALSE	canonical	1	544	junction_3	99507.31904387182	NA	20	3	TRUE	NA	NA	NA	C	coding	680	2043	2792	4834	60.0	-8833	False	NA	NA
PB.1648.1	chr10	+	2178	19	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	-4	8154	-4	-8154	3prime_fragment	FALSE	canonical	1	324823	junction_2	159705.97474948174	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2046	131	2176	60.0	-8	True	AAAAAG	-8
PB.921.1	chr1	-	4021	6	full-splice_match	SLC19A2	ENST00000236137.9	3671	6	23	-373	23	373	multi-exon	FALSE	canonical	1	99013	junction_4	37769.91907854715	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	215	1708	25.0	-37	True	AATAAA	-29
PB.921.2	chr1	-	3389	6	novel_not_in_catalog	SLC19A2	novel	3671	6	NA	NA	2133	-4	any annotated donor/acceptor	FALSE	canonical	1	393	junction_5	67736.54552160155	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	299	1453	40.0	2145	False	AATAAA	-31
PB.921.3	chr1	-	4064	5	novel_in_catalog	SLC19A2	novel	3671	6	NA	NA	-11	-9	intron_retention	FALSE	canonical	1	99013	junction_3	25253.788699668414	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	249	1520	45.0	-71	False	AATAAA	-26
PB.921.4	chr1	-	3749	7	novel_not_in_catalog	SLC19A2	novel	3671	6	NA	NA	-6	-9	any annotated donor/acceptor	FALSE	canonical	1	1352	junction_5	74937.32636602996	NA	2	NA	TRUE	NA	NA	NA	C	coding	269	810	185	994	45.0	-7	True	AATAAA	-26
PB.921.5	chr1	-	3586	6	full-splice_match	SLC19A2	ENST00000646527.1	3590	6	2	2	-1	-1	multi-exon	FALSE	canonical	1	99013	junction_4	37769.91907854715	NA	2	NA	TRUE	NA	NA	NA	C	coding	497	1494	177	1670	20.0	1	True	AATAAA	-11
PB.921.6	chr1	-	3546	6	novel_not_in_catalog	SLC19A2	novel	3671	6	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	1730	junction_1	65113.54060592928	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	188	1582	25.0	-10	True	AATAAA	-13
PB.921.7	chr1	-	3335	6	full-splice_match	SLC19A2	ENST00000646527.1	3590	6	-16	271	-16	-154	multi-exon	FALSE	canonical	1	99013	junction_4	37769.91907854715	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	195	1688	40.0	-17	True	ATTAAA	-10
PB.8464.1	chr3	+	2036	1	antisense	novelGene_PFN2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	152	False	AATAAA	-16
PB.6869.7	chr2	+	3258	22	novel_in_catalog	OSBPL6	novel	3637	26	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	13969	junction_3	23609.90489607728	NA	2	NA	TRUE	NA	NA	NA	C	coding	836	2511	535	3045	100.0	-21	True	NA	NA
PB.5782.16	chr19	+	2831	18	novel_not_in_catalog	ADGRE5	novel	587	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	299195.46853422053	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	81	2231	15.0	0	True	ATTAAA	-14
PB.8442.3	chr3	-	3620	17	full-splice_match	GK5	ENST00000480757.5	4479	17	-27	886	0	-876	multi-exon	FALSE	canonical	1	12646	junction_7	37994.64868652558	NA	5	NA	TRUE	NA	NA	NA	C	coding	250	753	2041	2793	20.0	9	True	CATAAA	-23
PB.1102.13	chr1	+	3883	11	full-splice_match	RCOR3	ENST00000367005.8	4246	11	-4	367	-4	-367	multi-exon	FALSE	canonical	1	137611	junction_9	46457.31921979571	NA	2	NA	TRUE	NA	NA	NA	C	coding	495	1488	146	1633	20.0	24	True	ATTAAA	-14
PB.6396.3	chr2	+	1219	3	full-splice_match	YPEL5	ENST00000261353.8	2182	3	-14	977	6	5	multi-exon	FALSE	canonical	1	721018	junction_1	38249.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	141	506	5.0	-22	True	AATAAA	-18
PB.2847.8	chr12	+	2139	14	incomplete-splice_match	HSP90B1	ENST00000299767.9	2858	18	70	4052	-6	407	3prime_fragment	FALSE	canonical	1	1962474	junction_4	841869.2977326702	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2025	113	2137	30.0	-6	True	NA	NA
PB.2847.9	chr12	+	2857	19	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	-3	2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_4	1742104.2961009631	NA	11	2	TRUE	NA	NA	NA	C	coding	650	1953	664	2616	70.0	-3	True	NA	NA
PB.1102.15	chr1	+	3764	1	novel_in_catalog	RCOR3	novel	4246	11	NA	NA	17	-368	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	116	351	1056	1406	15.0	NA	False	ATTAAA	-13
PB.1102.14	chr1	+	2919	3	full-splice_match	RCOR3	ENST00000486666.5	4086	3	2599	-1432	49	-366	multi-exon	FALSE	canonical	1	137611	junction_1	40764.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	ATTAAA	-15
PB.2847.2	chr12	+	3113	16	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	13824	junction_5	1671883.904798584	NA	4	NA	TRUE	NA	NA	NA	C	coding	326	981	1030	2010	30.0	-30	True	AATAAA	-10
PB.2847.3	chr12	+	3061	18	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	30728	junction_13	1579461.363864594	NA	2	NA	TRUE	NA	NA	NA	C	coding	661	1986	137	2122	30.0	-30	True	AATAAA	-10
PB.2148.6	chr11	+	1914	3	full-splice_match	ATG16L2	ENST00000540567.1	1492	3	-30	-392	-4	392	multi-exon	FALSE	canonical	1	126389	junction_1	83622.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	45	383	65.0	-30	True	NA	NA
PB.2847.1	chr12	+	2679	18	full-splice_match	HSP90B1	ENST00000299767.9	2858	18	156	23	52	2	multi-exon	FALSE	canonical	1	1962474	junction_4	1322603.7403297934	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2412	27	2438	70.0	-1	True	NA	NA
PB.2847.6	chr12	+	2702	17	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	13824	junction_5	1637068.4165260347	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	1029	2435	15.0	-29	True	AATAAA	-18
PB.2148.1	chr11	+	5987	17	novel_in_catalog	ATG16L2	novel	2243	18	NA	NA	-29	1	intron_retention	FALSE	canonical	1	126389	junction_1	127903.77191746475	NA	59	1	TRUE	NA	NA	NA	C	coding	513	1542	4200	5741	5.0	-619	False	NA	NA
PB.2847.4	chr12	+	3011	18	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	23296	junction_13	1580438.6556498825	NA	3	NA	TRUE	NA	NA	NA	C	coding	651	1956	137	2092	30.0	-30	True	AATAAA	-10
PB.2847.5	chr12	+	2916	16	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	-2	10	intron_retention	FALSE	canonical	1	1962474	junction_4	1350071.1576729312	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	137	2122	65.0	-30	True	NA	NA
PB.3330.1	chr14	+	2111	1	novel_in_catalog	NGDN	novel	1143	11	NA	NA	0	200	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-4	True	NA	NA
PB.3330.2	chr14	+	1106	11	full-splice_match	NGDN	ENST00000408901.7	1143	11	15	22	0	-7	multi-exon	FALSE	canonical	1	182463	junction_1	186921.80678615323	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	14	961	30.0	0	True	AATAAA	-17
PB.2049.4	chr11	+	2066	2	novel_not_in_catalog	DPF2	novel	2799	11	NA	NA	3	-5217	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	coding	182	549	173	721	100.0	-9	True	NA	NA
PB.2049.5	chr11	+	3095	11	novel_not_in_catalog	DPF2	novel	2799	11	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	2566	junction_1	197837.54909624712	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	760	1875	10.0	-2	True	AATAAA	-14
PB.4296.2	chr16	+	1784	5	full-splice_match	TMEM159	ENST00000261388.7	1812	5	33	-5	2	-2	multi-exon	FALSE	canonical	1	136549	junction_1	93856.24358959823	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	241	726	25.0	33	False	AATAAA	-25
PB.8617.11	chr3	-	3256	9	full-splice_match	PCYT1A	ENST00000431016.5	1482	9	93	-1867	0	1867	multi-exon	FALSE	canonical	1	259432	junction_7	101017.94275245116	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	149	1252	75.0	-75	True	NA	NA
PB.2049.1	chr11	+	2481	12	full-splice_match	DPF2	ENST00000252268.8	2462	12	-21	2	-6	0	multi-exon	FALSE	canonical	1	44210	junction_7	201973.63791907218	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	42	1259	10.0	-21	True	AATAAA	-16
PB.2049.2	chr11	+	2589	11	full-splice_match	DPF2	ENST00000528416.5	2799	11	98	112	0	-51	multi-exon	FALSE	canonical	1	224272	junction_6	144872.20043338198	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	36	1211	40.0	-15	True	NA	NA
PB.2049.3	chr11	+	2432	11	full-splice_match	DPF2	ENST00000528416.5	2799	11	99	268	1	0	multi-exon	FALSE	canonical	1	224272	junction_6	144872.20043338198	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	35	1210	10.0	-14	True	AATAAA	-16
PB.5504.15	chr18	-	4334	31	novel_in_catalog	PIGN	novel	2493	25	NA	NA	-14	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	51252.05426512732	NA	3	NA	TRUE	NA	NA	NA	C	coding	931	2796	307	3102	40.0	-101	False	NA	NA
PB.5504.14	chr18	-	4367	30	full-splice_match	PIGN	ENST00000400334.7	4456	30	14	75	0	10	multi-exon	FALSE	canonical	0	0	junction_18	46705.61188118827	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	340	3135	40.0	-32	True	NA	NA
PB.5504.17	chr18	-	4241	29	full-splice_match	PIGN	ENST00000640876.1	6045	29	32	1772	0	10	multi-exon	FALSE	canonical	0	0	junction_18	42182.547451523125	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	214	3009	40.0	-32	True	NA	NA
PB.5504.16	chr18	-	4319	30	full-splice_match	PIGN	ENST00000357637.10	4723	30	13	391	-1	10	multi-exon	FALSE	canonical	0	0	junction_18	47549.61368063015	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	292	3087	40.0	-33	True	NA	NA
PB.5504.11	chr18	-	4526	29	full-splice_match	PIGN	ENST00000640170.1	4505	29	-9	-12	0	5	multi-exon	FALSE	canonical	0	0	junction_18	49610.06749277565	NA	10	NA	TRUE	NA	NA	NA	C	coding	688	2067	832	2898	20.0	-6	True	AATAAA	-19
PB.5504.10	chr18	-	4516	29	full-splice_match	PIGN	ENST00000640145.1	4505	29	-5	-6	-3	5	multi-exon	FALSE	canonical	0	0	junction_18	47577.445395236755	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	93	2888	20.0	-90	False	AATAAA	-19
PB.5504.13	chr18	-	4460	31	full-splice_match	PIGN	ENST00000640252.1	7924	31	6	3458	0	12	multi-exon	FALSE	canonical	0	0	junction_18	47373.01069841585	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	431	3226	40.0	-46	True	NA	NA
PB.11314.2	chr8	-	2152	9	full-splice_match	DSCC1	ENST00000313655.4	2314	9	75	87	75	-87	multi-exon	FALSE	canonical	1	136623	junction_5	40757.86216179647	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	141	1322	35.0	-78	True	ATTAAA	-16
PB.11829.1	chr9	+	3015	22	full-splice_match	PKN3	ENST00000291906.4	3375	22	351	9	351	-9	multi-exon	FALSE	canonical	1	40430	junction_1	43509.55220749867	NA	0	NA	TRUE	NA	NA	NA	A	coding	889	2670	43	2712	35.0	13	False	ATTAAA	-6
PB.5504.19	chr18	-	3769	29	full-splice_match	PIGN	ENST00000640876.1	6045	29	20	2256	2	79	multi-exon	FALSE	canonical	0	0	junction_18	42182.547451523125	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	226	3021	30.0	-44	True	AATAAA	-21
PB.5504.18	chr18	-	3916	29	full-splice_match	PIGN	ENST00000640876.1	6045	29	32	2097	0	-226	multi-exon	FALSE	canonical	0	0	junction_18	42182.547451523125	NA	2	NA	TRUE	NA	NA	NA	C	coding	931	2796	214	3009	35.0	-32	True	ATTAAA	-22
PB.5419.3	chr18	+	3216	18	novel_in_catalog	RBBP8	novel	564	5	NA	NA	16	12	combination_of_known_junctions	FALSE	canonical	1	35513	junction_15	77678.03723368343	NA	0	NA	TRUE	NA	NA	NA	C	coding	876	2631	333	2963	10.0	3	True	AATACA	-30
PB.3317.1	chr14	-	2216	18	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	36221	junction_1	255899.13213628496	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	40	1944	15.0	-16	True	AATAAA	-25
PB.8418.10	chr3	+	1777	15	full-splice_match	PCCB	ENST00000251654.8	1833	15	56	0	3	0	multi-exon	FALSE	canonical	1	522219	junction_8	90690.0037685285	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	15	1634	15.0	10	True	ATTAAA	-14
PB.3317.2	chr14	-	2103	18	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	1	52016	junction_1	252875.6422635046	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	79	1950	15.0	-55	False	AATAAA	-21
PB.3317.5	chr14	-	2259	16	full-splice_match	PRMT5	ENST00000553897.5	1857	16	-53	-349	-53	-2	multi-exon	FALSE	canonical	1	34795	junction_14	271079.7132305469	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	110	1882	15.0	-86	False	AATAAA	-22
PB.3317.4	chr14	-	2391	17	full-splice_match	PRMT5	ENST00000397441.6	2418	17	25	2	0	-2	multi-exon	FALSE	canonical	1	47994	junction_16	259109.61091073503	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	152	2014	15.0	-1	True	AATAAA	-22
PB.3317.7	chr14	-	2266	17	novel_not_in_catalog	PRMT5	novel	2531	17	NA	NA	6	1	intron_retention	FALSE	canonical	1	493	junction_15	270648.53084015363	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	34	1890	15.0	-10	True	AATAAA	-21
PB.3317.6	chr14	-	1844	13	novel_in_catalog	PRMT5	novel	2531	17	NA	NA	0	-2	intron_retention	FALSE	canonical	1	7783	junction_10	303196.9943813918	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	25	1467	15.0	-1	True	AATAAA	-22
PB.12232.2	chrX	+	3950	10	novel_in_catalog	IL13RA1	novel	4036	11	NA	NA	-14	-3	no_combination_of_known_junctions	FALSE	canonical	1	1435	junction_8	173576.48930722795	NA	2	NA	TRUE	NA	NA	NA	C	coding	383	1152	82	1233	15.0	-50	False	AATAAA	-24
PB.12232.3	chrX	+	1793	11	full-splice_match	IL13RA1	ENST00000371666.7	4036	11	19	2224	-11	-2224	multi-exon	FALSE	canonical	1	82010	junction_1	122406.60133706026	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	49	1332	25.0	-17	True	GATAAA	-22
PB.9832.5	chr6	+	2027	5	incomplete-splice_match	HLA-F	ENST00000334668.8	1283	7	61	1	9	-1	intron_retention	FALSE	canonical	1	689657	junction_1	390362.9214598737	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	64	1080	30.0	0	True	AATAAA	-26
PB.12232.1	chrX	+	4002	11	full-splice_match	IL13RA1	ENST00000371666.7	4036	11	31	3	1	-3	multi-exon	FALSE	canonical	1	82010	junction_1	122406.60133706026	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	37	1320	15.0	-5	True	AATAAA	-24
PB.12232.6	chrX	+	2125	11	full-splice_match	IL13RA1	ENST00000371666.7	4036	11	16	1895	-14	-1895	multi-exon	FALSE	canonical	1	82010	junction_1	122406.60133706026	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	52	1335	85.0	-20	True	NA	NA
PB.9832.2	chr6	+	1351	6	novel_in_catalog	HLA-F	novel	1544	8	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	782165	junction_5	344170.0322459235	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	389	1234	30.0	0	True	AATAAA	-26
PB.12232.4	chrX	+	2941	11	full-splice_match	IL13RA1	ENST00000371666.7	4036	11	9	1086	9	-1086	multi-exon	FALSE	canonical	1	82010	junction_1	122406.60133706026	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	59	1342	25.0	-27	True	ATTAAA	-24
PB.12232.5	chrX	+	3877	10	novel_in_catalog	IL13RA1	novel	4036	11	NA	NA	13	-7	no_combination_of_known_junctions	FALSE	canonical	1	11272	junction_2	182797.82056147355	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	339	1199	20.0	-23	True	AATAAA	-20
PB.3661.9	chr14	+	2764	15	novel_not_in_catalog	EVL	novel	2353	14	NA	NA	1	0	intron_retention	FALSE	canonical	1	613	junction_1	478137.1442285793	NA	5	NA	TRUE	NA	NA	NA	C	coding	403	1212	1056	2267	10.0	0	True	AATAAA	-16
PB.3661.8	chr14	+	3551	12	novel_in_catalog	EVL	novel	2353	14	NA	NA	-9	-27	combination_of_known_junctions	FALSE	canonical	1	17016	junction_4	446137.54129657004	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	500	1330	80.0	-14	True	NA	NA
PB.9288.1	chr5	+	5009	25	novel_not_in_catalog	FCHO2	novel	4981	26	NA	NA	-29	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	40943.69566040171	NA	1	1	TRUE	NA	NA	NA	A	coding	809	2430	146	2575	15.0	0	True	AATAAA	-21
PB.3661.3	chr14	+	4691	1	novel_in_catalog	EVL	novel	2353	14	NA	NA	-44	-15035	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	147	444	1591	2034	95.0	-5208	False	NA	NA
PB.3661.2	chr14	+	2027	3	full-splice_match	EVL	ENST00000557637.1	501	3	-91	-1435	-63	1435	multi-exon	FALSE	canonical	1	474296	junction_1	327654.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	148	513	95.0	-5227	False	NA	NA
PB.3661.1	chr14	+	1835	14	full-splice_match	EVL	ENST00000392920.7	1978	14	141	2	2	-1	multi-exon	FALSE	canonical	1	474296	junction_1	339707.4337930165	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	83	1339	10.0	-3	True	AATAAA	-15
PB.3661.7	chr14	+	1924	15	novel_in_catalog	EVL	novel	2353	14	NA	NA	-10	0	intron_retention	FALSE	canonical	1	17016	junction_4	488465.1676196302	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	501	1427	10.0	-15	True	AATAAA	-16
PB.3661.6	chr14	+	3484	11	incomplete-splice_match	EVL	ENST00000392920.7	1978	14	129	4138	-10	-19	3prime_fragment	FALSE	canonical	1	474296	junction_1	283673.5970336506	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	95	1255	80.0	-15	True	NA	NA
PB.3661.5	chr14	+	2556	4	novel_in_catalog	EVL	novel	2353	14	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	1	19405	junction_3	455691.9300904456	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	118	570	20.0	2	True	AATAAA	-18
PB.3661.4	chr14	+	2975	14	novel_in_catalog	EVL	novel	2353	14	NA	NA	-42	0	intron_retention	FALSE	canonical	1	79933	junction_11	425656.551858309	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	127	1287	10.0	-5206	False	AATAAA	-16
PB.7900.8	chr22	-	2346	10	novel_not_in_catalog	RABL2B	novel	1126	10	NA	NA	-2	0	intron_retention	TRUE	canonical	0	0	junction_8	92935.44931474389	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	393	1079	45.0	7	False	AGTAAA	-14
PB.859.6	chr1	-	2829	2	novel_in_catalog	CD48	novel	1126	4	NA	NA	12	-4	no_combination_of_known_junctions	FALSE	canonical	1	22956	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	151	456	29	484	20.0	-1	True	AATAAA	-25
PB.9113.8	chr5	+	2418	15	full-splice_match	SDHA	ENST00000264932.10	2390	15	79	-107	2	107	multi-exon	FALSE	canonical	1	774902	junction_2	333097.44748809875	NA	3	NA	TRUE	NA	NA	NA	C	coding	664	1995	37	2031	0.0	-4	True	NA	NA
PB.9113.5	chr5	+	3136	12	novel_not_in_catalog	SDHA	novel	1952	13	NA	NA	1	-1637	any annotated donor/acceptor	FALSE	canonical	1	1761	junction_11	417336.6772102898	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	38	1621	5.0	-5	True	NA	NA
PB.9113.4	chr5	+	2032	13	full-splice_match	SDHA	ENST00000504309.5	2067	13	13	22	0	12	multi-exon	FALSE	canonical	1	64511	junction_11	453248.13812953373	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	41	1792	70.0	-8	True	GATAAA	-17
PB.9113.7	chr5	+	1874	8	incomplete-splice_match	SDHA	ENST00000504824.5	1430	9	-52	1106	1	789	3prime_fragment	FALSE	canonical	1	774902	junction_2	263695.87449235097	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	38	1111	100.0	-5	True	NA	NA
PB.9113.6	chr5	+	2406	16	novel_in_catalog	SDHA	novel	1952	13	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	1	4989	junction_2	554593.143787127	NA	2	1	TRUE	NA	NA	NA	C	coding	551	1656	475	2130	40.0	-5	True	AATAAA	-30
PB.9113.1	chr5	+	2311	15	full-splice_match	SDHA	ENST00000264932.10	2390	15	81	-2	4	2	multi-exon	FALSE	canonical	1	774902	junction_2	333097.44748809875	NA	4	1	TRUE	NA	NA	NA	C	coding	664	1995	35	2029	30.0	-2	True	AATAAA	-36
PB.4013.2	chr15	-	4183	1	novel_in_catalog	WDR61	novel	1266	11	NA	NA	0	-686	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	124	375	197	571	85.0	3	True	AATAGA	-19
PB.4013.1	chr15	-	1196	11	full-splice_match	WDR61	ENST00000267973.6	1387	11	189	2	0	-2	multi-exon	FALSE	canonical	1	505010	junction_10	162920.37166115845	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	84	1001	30.0	3	True	CATAAA	-15
PB.9113.2	chr5	+	4274	13	novel_in_catalog	SDHA	novel	1952	13	NA	NA	-1	12	intron_retention	FALSE	canonical	1	774902	junction_2	353433.3586156032	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	3258	4034	70.0	-47	False	GATAAA	-17
PB.9238.3	chr5	-	2906	13	novel_in_catalog	PLK2	novel	2960	14	NA	NA	1	0	intron_retention	FALSE	canonical	1	526945	junction_12	79432.12828096106	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	127	1755	25.0	0	True	AATAAA	-17
PB.1046.11	chr1	-	5309	4	novel_in_catalog	CHI3L1	novel	1920	2	NA	NA	17	-7	intron_retention	FALSE	canonical	1	907940	junction_2	59400.602142477386	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	324	2843	3166	15.0	13	False	AATAAA	-13
PB.1046.12	chr1	-	2272	10	novel_not_in_catalog	CHI3L1	novel	1920	2	NA	NA	17	-7	intron_retention	FALSE	canonical	1	28044	junction_1	302784.6902958529	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	110	1027	15.0	13	False	AATAAA	-13
PB.7914.7	chr3	+	1958	10	full-splice_match	THUMPD3	ENST00000345094.7	3961	10	0	2003	0	-82	multi-exon	FALSE	canonical	1	92279	junction_1	110016.43161819056	NA	0	NA	TRUE	NA	NA	NA	C	coding	507	1524	335	1858	25.0	-7	True	AAAAAG	-30
PB.6880.9	chr2	+	4820	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	305	-936	102	936	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	2	NA	TRUE	NA	NA	NA	C	coding	1012	3039	186	3224	40.0	2	True	AATAAA	-23
PB.1951.3	chr11	+	670	4	full-splice_match	SELENOH	ENST00000534355.5	818	4	138	10	-22	-10	multi-exon	FALSE	canonical	1	1850157	junction_1	380529.57664491143	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	0	True	AATAAA	-6
PB.1951.2	chr11	+	1564	1	novel_in_catalog	TMX2-CTNND1	novel	585	4	NA	NA	28860	-48558	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-26	True	AATAAA	-6
PB.1951.1	chr11	+	1537	2	full-splice_match	SELENOH	ENST00000533321.1	1454	2	-112	29	48	-10	multi-exon	FALSE	canonical	1	1850157	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	43	132	196	327	50.0	-160	False	AATAAA	-6
PB.8266.15	chr3	-	5047	5	novel_in_catalog	TOMM70	novel	4409	12	NA	NA	313	815	intron_retention	FALSE	canonical	1	452498	junction_4	83511.10437091585	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	137	880	70.0	-4	True	NA	NA
PB.8266.14	chr3	-	2365	6	incomplete-splice_match	TOMM70	ENST00000284320.5	4409	12	280	13170	280	815	3prime_fragment	FALSE	canonical	1	452498	junction_5	79029.59708716729	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	170	1270	70.0	-37	True	NA	NA
PB.859.7	chr1	-	2173	3	full-splice_match	CD48	ENST00000613788.1	1500	3	2	-675	2	675	multi-exon	FALSE	canonical	1	1414675	junction_2	279538.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	67	825	25.0	1021	False	AATAAA	-21
PB.8266.13	chr3	-	2249	12	full-splice_match	TOMM70	ENST00000284320.5	4409	12	308	1852	308	-1852	multi-exon	FALSE	canonical	1	452498	junction_11	108992.48400298296	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	142	1968	45.0	-9	True	AATAAA	-34
PB.7914.3	chr3	+	3534	10	full-splice_match	THUMPD3	ENST00000452837.6	2877	10	200	-857	-9	-232	multi-exon	FALSE	canonical	1	135218	junction_1	100595.78608801994	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	140	1663	40.0	-17	True	AATAAA	-20
PB.4.2	chr1	-	2703	1	full-splice_match	LINC00115	ENST00000473798.1	1317	1	0	-1386	0	1386	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	163	492	332	823	70.0	-1	True	AATGAA	-41
PB.6467.9	chr2	+	8212	35	novel_in_catalog	SPTBN1	novel	8482	36	NA	NA	334	0	combination_of_known_junctions	FALSE	canonical	1	433650	junction_1	415668.1502057518	NA	5	NA	TRUE	NA	NA	NA	C	coding	2351	7056	52	7107	20.0	-1865	False	ATTAAA	-14
PB.4.3	chr1	-	1306	1	full-splice_match	LINC00115	ENST00000473798.1	1317	1	21	-10	21	10	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	163	492	311	802	15.0	20	False	AATAAA	-24
PB.3356.1	chr14	-	2800	6	novel_in_catalog	AL096870.1	novel	930	4	NA	NA	-2625	-3716	intron_retention	FALSE	canonical	1	41423	junction_5	13044.752962015033	NA	0	NA	TRUE	NA	NA	NA	A	coding	318	957	1695	2651	25.0	-19	True	AATAAA	-15
PB.2287.5	chr11	-	4669	25	full-splice_match	USP28	ENST00000003302.8	4669	25	0	0	0	0	multi-exon	FALSE	canonical	1	18976	junction_7	64693.212331517694	NA	1	NA	TRUE	NA	NA	NA	C	coding	1077	3234	70	3303	10.0	-1	True	AATAAA	-15
PB.3307.1	chr14	-	4896	2	full-splice_match	SALL2	ENST00000537235.1	659	2	-173	-4064	114	-2	multi-exon	FALSE	canonical	1	122859	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	1005	3018	260	3277	25.0	10005	False	ATTAAA	-11
PB.8652.1	chr4	-	1190	2	incomplete-splice_match	SPON2	ENST00000400762.7	1736	4	7521	3	-84	-3	5prime_fragment	FALSE	canonical	1	56917	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	327	701	20.0	-12	True	NA	NA
PB.6467.5	chr2	+	2552	2	incomplete-splice_match	SPTBN1	ENST00000356805.8	8482	36	10	140976	10	-16	3prime_fragment	FALSE	canonical	1	151261	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	4	True	AGTAAA	-3
PB.331.1	chr1	-	3033	1	full-splice_match	NFYC-AS1	ENST00000606277.1	1687	1	-44	-1302	-44	1302	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-45	False	NA	NA
PB.11298.2	chr8	+	2148	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	1	-906	1	900	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	35	928	35.0	-12	True	NA	NA
PB.7038.1	chr2	-	2675	2	full-splice_match	SCG2	ENST00000305409.2	2576	2	-193	94	-193	-94	multi-exon	FALSE	canonical	1	388078	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	617	1854	427	2280	70.0	0	True	NA	NA
PB.10354.1	chr7	+	1344	9	full-splice_match	GET4	ENST00000265857.7	2090	9	1	745	1	31	multi-exon	FALSE	canonical	1	446727	junction_5	127424.64338476438	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	112	1077	10.0	-1	True	AATAAA	-19
PB.11831.2	chr9	+	3811	11	novel_in_catalog	TBC1D13	novel	3906	12	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	34254	junction_2	74399.44101160977	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	286	1260	15.0	-44	True	AATAAA	-22
PB.10354.3	chr7	+	2048	9	full-splice_match	GET4	ENST00000265857.7	2090	9	48	-6	48	4	multi-exon	FALSE	canonical	1	446727	junction_5	127424.64338476438	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	65	1030	10.0	9	True	AATAAA	-20
PB.10354.2	chr7	+	2166	8	novel_in_catalog	SUN1	novel	2975	17	NA	NA	8092	6	intron_retention	FALSE	canonical	1	446727	junction_5	93136.97185438273	NA	0	NA	TRUE	NA	NA	NA	B	coding	300	903	99	1001	10.0	12	True	AATAAA	-21
PB.11932.34	chr9	+	3257	19	novel_not_in_catalog	EHMT1	novel	5137	27	NA	NA	5159	-31	any annotated donor/acceptor	FALSE	canonical	1	7218	junction_1	104086.50991303603	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	173	2500	80.0	NA	False	AATAAA	-36
PB.8461.39	chr3	-	1909	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	193	1	117	-1	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	148	1350	10.0	116	False	AGTAAA	-37
PB.11831.3	chr9	+	3789	12	novel_not_in_catalog	TBC1D13	novel	3906	12	NA	NA	-13	-1	any annotated donor/acceptor	FALSE	canonical	1	8703	junction_9	80978.10309119333	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	98	1237	15.0	-43	True	AATAAA	-23
PB.7448.1	chr21	+	2600	1	intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	5.0	NA	False	NA	NA
PB.11065.1	chr8	+	3999	1	genic	HMBOX1	novel	NA	NA	NA	NA	8420	171	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-91	False	AATAAA	-10
PB.11065.2	chr8	+	2334	1	genic	HMBOX1	novel	NA	NA	NA	NA	10087	173	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	1576	False	AATAAA	-12
PB.11666.7	chr9	+	2667	16	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-131	59	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	19153.518782023668	NA	0	NA	TRUE	NA	NA	NA	C	coding	880	2640	28	2667	75.0	-19	True	NA	NA
PB.2170.1	chr11	+	3776	4	novel_in_catalog	RPS3	novel	2097	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	8567785	junction_2	6983187.832505486	NA	3	NA	TRUE	NA	NA	NA	C	coding	94	285	32	316	30.0	-2	True	AATAAA	-15
PB.6467.2	chr2	+	8376	36	full-splice_match	SPTBN1	ENST00000356805.8	8482	36	105	1	73	0	multi-exon	FALSE	canonical	1	151261	junction_1	460881.9138225039	NA	2	NA	TRUE	NA	NA	NA	C	coding	2364	7095	177	7271	20.0	-1319	False	ATTAAA	-14
PB.2170.2	chr11	+	845	7	full-splice_match	RPS3	ENST00000531188.5	2097	7	32	1220	0	1	multi-exon	FALSE	canonical	1	8153498	junction_3	5371230.087292875	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	31	762	20.0	-1	True	AATAAA	-21
PB.918.2	chr1	+	2083	6	full-splice_match	ATP1B1	ENST00000367815.8	1883	6	344	-544	344	-159	multi-exon	FALSE	canonical	1	754063	junction_1	483917.8416154544	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	164	1075	45.0	-4652	False	AATAAA	-44
PB.11666.1	chr9	+	5807	19	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-88	-640	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	18147.765701081717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1561	4686	394	5079	25.0	-19	True	AATAAA	-13
PB.2053.5	chr11	+	3414	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	3	19326	1	-171	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	3	True	TTTAAA	-26
PB.2053.4	chr11	+	3375	2	full-splice_match	NEAT1	ENST00000499732.3	3441	2	24	42	0	10	multi-exon	FALSE	canonical	1	254151	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.2053.7	chr11	+	10212	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	0	12531	0	6496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	137	414	7362	7775	85.0	0	True	NA	NA
PB.2053.6	chr11	+	3143	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	0	19600	0	-445	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATGAA	-22
PB.2053.1	chr11	+	2793	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	940	19010	199	17	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9912	False	AATAAA	-23
PB.6935.1	chr2	-	2564	7	full-splice_match	KCTD18	ENST00000409157.5	2556	7	-3	-5	-3	-1	multi-exon	FALSE	canonical	1	34433	junction_6	41917.85487381507	NA	2	NA	TRUE	NA	NA	NA	C	coding	426	1281	137	1417	10.0	-4	True	AATAAA	-21
PB.2053.3	chr11	+	3485	2	full-splice_match	NEAT1	ENST00000499732.3	3441	2	24	-68	0	12	multi-exon	FALSE	canonical	1	254151	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-18
PB.2053.2	chr11	+	3617	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	0	19126	0	9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.2053.9	chr11	+	1823	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	0	20920	0	216	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	TTTAAA	-40
PB.2053.8	chr11	+	1976	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	1	20766	1	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	1	True	NA	NA
PB.3501.12	chr14	+	2319	9	incomplete-splice_match	FNTB	ENST00000246166.2	2834	12	28956	-52	138	-2	5prime_fragment	FALSE	canonical	1	141216	junction_3	18977.764449481398	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	244	981	15.0	53	False	AATAAA	-15
PB.3501.13	chr14	+	2568	10	novel_in_catalog	CHURC1-FNTB	novel	1847	13	NA	NA	91536	847	no_combination_of_known_junctions	FALSE	canonical	1	10254	junction_3	71966.57475745937	NA	3	NA	TRUE	NA	NA	NA	C	coding	193	582	649	1230	15.0	5	True	AATAAA	-15
PB.11606.2	chr9	+	2876	12	novel_in_catalog	ANXA1	novel	1509	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2921819	junction_1	1232584.5923968998	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	75	968	15.0	0	True	AATAAA	-17
PB.6414.37	chr2	-	1989	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	82	7971	67	92	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	242	1897	25.0	1	True	AATAGA	-13
PB.2314.11	chr11	-	4881	25	novel_not_in_catalog	HYOU1	novel	4529	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	311762	junction_2	351358.0879776732	NA	10	NA	TRUE	NA	NA	NA	C	coding	619	1860	123	1982	10.0	-1	True	AATAAA	-15
PB.6140.2	chr19	+	1617	3	incomplete-splice_match	RCN3	ENST00000270645.7	1859	7	382	8136	-290	-1582	3prime_fragment	FALSE	canonical	1	312748	junction_2	14205.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	69	551	45.0	-3	True	NA	NA
PB.8170.7	chr3	+	2027	15	full-splice_match	GNL3	ENST00000394799.6	2041	15	14	0	0	0	multi-exon	FALSE	canonical	1	34653	junction_1	516947.7010644514	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	197	1810	45.0	-2	True	AATAAA	-19
PB.3397.8	chr14	+	3685	9	full-splice_match	PNN	ENST00000216832.8	3576	9	41	-150	24	150	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	27	2180	40.0	0	True	ATTAAA	-19
PB.8170.5	chr3	+	2310	13	novel_in_catalog	GNL3	novel	547	6	NA	NA	-23	0	intron_retention	FALSE	canonical	1	53455	junction_5	535786.6341503554	NA	0	NA	TRUE	NA	NA	NA	C	coding	127	384	1710	2093	45.0	-6401	False	AATAAA	-19
PB.8170.4	chr3	+	3906	15	novel_not_in_catalog	GNL3	novel	547	6	NA	NA	-247	1669	intron_retention	FALSE	canonical	1	20368	junction_1	519668.8432783567	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	407	2020	20.0	-14	True	AATAAA	-18
PB.8170.3	chr3	+	1927	15	full-splice_match	GNL3	ENST00000418458.5	2040	15	112	1	0	-1	multi-exon	FALSE	canonical	1	1036169	junction_6	357811.9196981374	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	62	1711	40.0	0	True	AATAAA	-18
PB.8170.2	chr3	+	2258	15	novel_not_in_catalog	GNL3	novel	547	6	NA	NA	-268	0	any annotated donor/acceptor	FALSE	canonical	1	20368	junction_1	519668.8432783567	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	428	2041	45.0	-35	True	AATAAA	-19
PB.8170.1	chr3	+	2221	15	novel_not_in_catalog	GNL3	novel	547	6	NA	NA	-286	-2	any annotated donor/acceptor	FALSE	canonical	1	1019	junction_1	523373.301225598	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	393	2006	40.0	-6749	False	AATAAA	-17
PB.1561.2	chr10	+	6439	7	novel_not_in_catalog	ZNF518A	novel	7277	6	NA	NA	246	-1019	any annotated donor/acceptor	FALSE	canonical	1	22051	junction_4	32618.0467669186	NA	3	NA	TRUE	NA	NA	NA	B	coding	1483	4452	1039	5490	40.0	-246	False	ATTAAA	-19
PB.11666.8	chr9	+	4223	18	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-51	6	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	17999.23324222336	NA	0	NA	TRUE	NA	NA	NA	C	coding	1247	3744	357	4100	30.0	0	True	AATAAA	-21
PB.3397.3	chr14	+	2432	9	full-splice_match	PNN	ENST00000216832.8	3576	9	40	1104	23	-636	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	28	2181	25.0	-1	True	AATAAA	-16
PB.1561.1	chr10	+	2496	1	novel_in_catalog	ZNF518A	novel	7277	6	NA	NA	-266	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-151	False	NA	NA
PB.3397.5	chr14	+	2641	9	full-splice_match	PNN	ENST00000216832.8	3576	9	38	897	21	-429	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	2	NA	TRUE	NA	NA	NA	C	coding	717	2154	30	2183	35.0	-3	True	AATAAA	-35
PB.3397.4	chr14	+	3553	9	full-splice_match	PNN	ENST00000216832.8	3576	9	24	-1	7	1	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	44	2197	30.0	-17	True	ATTAAA	-14
PB.3397.7	chr14	+	1403	9	full-splice_match	PNN	ENST00000216832.8	3576	9	41	2132	24	385	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1377	27	1403	70.0	0	True	NA	NA
PB.3397.6	chr14	+	3271	9	full-splice_match	PNN	ENST00000216832.8	3576	9	37	268	20	200	multi-exon	FALSE	canonical	1	1184858	junction_8	129092.79021018176	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	31	2184	40.0	-4	True	AATAAA	-27
PB.11995.19	chrX	-	2682	17	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	-342	-28	any annotated donor/acceptor	FALSE	canonical	1	9168	junction_16	206106.49153842134	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	166	1986	80.0	-3	True	NA	NA
PB.11995.18	chrX	-	2585	17	full-splice_match	SH3KBP1	ENST00000379698.8	2678	17	-31	124	-31	-124	multi-exon	FALSE	canonical	1	30602	junction_16	201910.75324082506	NA	1	1	TRUE	NA	NA	NA	C	coding	628	1887	99	1985	70.0	-10	True	NA	NA
PB.8097.5	chr3	-	3890	12	novel_not_in_catalog	PRKAR2A	novel	448	3	NA	NA	-8	-799	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	109215.83808417968	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	259	1473	95.0	-51	True	NA	NA
PB.8097.4	chr3	-	4057	12	novel_not_in_catalog	PRKAR2A	novel	448	3	NA	NA	-80	-799	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	109215.83808417968	NA	2	NA	TRUE	NA	NA	NA	C	coding	404	1215	331	1545	95.0	-123	False	NA	NA
PB.7682.2	chr22	+	1966	14	novel_in_catalog	EMID1	novel	2173	15	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	1	16047	junction_3	48811.817713996046	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	67	1314	10.0	-61	False	AATAAA	-22
PB.8097.2	chr3	-	2345	12	full-splice_match	PRKAR2A	ENST00000454963.5	1849	12	-49	-447	-7	447	multi-exon	FALSE	canonical	1	25370	junction_1	103675.53895058476	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	258	1472	100.0	-50	True	NA	NA
PB.8097.1	chr3	-	3702	12	novel_not_in_catalog	PRKAR2A	novel	448	3	NA	NA	-80	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	109215.83808417968	NA	4	1	TRUE	NA	NA	NA	C	coding	404	1215	331	1545	15.0	-123	False	AATAAA	-13
PB.7682.1	chr22	+	2065	15	full-splice_match	EMID1	ENST00000334018.10	2173	15	104	4	-4	-4	multi-exon	FALSE	canonical	1	72758	junction_7	38502.28896614658	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	85	1416	10.0	29	True	AATAAA	-19
PB.11995.11	chrX	-	2794	19	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	45	-26	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	229582.80165340062	NA	2	1	TRUE	NA	NA	NA	C	coding	665	1998	99	2096	80.0	-3	True	NA	NA
PB.614.2	chr1	+	1560	9	novel_in_catalog	RAP1A	novel	1586	8	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	1	15353	junction_1	400958.61792644433	NA	1	1	TRUE	NA	NA	NA	C	coding	184	555	296	850	5.0	-28	True	ATTAAA	-38
PB.11995.13	chrX	-	3032	19	novel_in_catalog	SH3KBP1	novel	4731	18	NA	NA	10	-28	no_combination_of_known_junctions	FALSE	canonical	1	3870	junction_13	267178.53360285674	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	282	2336	80.0	8	True	NA	NA
PB.11995.12	chrX	-	2879	18	full-splice_match	SH3KBP1	ENST00000397821.7	4731	18	10	1842	10	-124	multi-exon	FALSE	canonical	1	231353	junction_17	179425.67553461212	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	282	2279	70.0	8	True	NA	NA
PB.11995.15	chrX	-	2911	17	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	-7994	-28	any annotated donor/acceptor	FALSE	canonical	1	2601	junction_16	207400.9800204365	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	395	2215	80.0	-189	False	NA	NA
PB.11995.14	chrX	-	2956	18	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	3193	-28	any annotated donor/acceptor	FALSE	canonical	1	481	junction_17	215799.13411398575	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	266	2260	80.0	3634	False	NA	NA
PB.11995.17	chrX	-	2846	17	novel_in_catalog	SH3KBP1	novel	4731	18	NA	NA	10	-28	no_combination_of_known_junctions	FALSE	canonical	1	41676	junction_3	236320.51951645533	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	282	2150	80.0	8	True	NA	NA
PB.11995.16	chrX	-	2926	18	novel_not_in_catalog	SH3KBP1	novel	4731	18	NA	NA	33	-28	any annotated donor/acceptor	FALSE	canonical	1	20888	junction_16	221843.09654163997	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	356	2230	80.0	-15	True	NA	NA
PB.5048.4	chr17	+	1853	12	full-splice_match	NMT1	ENST00000258960.6	4879	12	-5	3031	-5	-8	multi-exon	FALSE	canonical	1	664521	junction_4	166558.3488338184	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	24	1514	50.0	-15	True	AATAAA	-22
PB.5048.5	chr17	+	1897	1	novel_in_catalog	NMT1	novel	4999	13	NA	NA	-4	-30552	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-14	True	NA	NA
PB.1382.12	chr10	-	2527	4	full-splice_match	HNRNPF	ENST00000356053.7	2670	4	-264	407	20	-2	multi-exon	FALSE	canonical	1	48079	junction_3	872080.4400390291	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	670	1914	35.0	38	False	AATAAA	-12
PB.5048.1	chr17	+	3458	10	incomplete-splice_match	NMT1	ENST00000258960.6	4879	12	-8	3033	-8	-10	intron_retention	FALSE	canonical	1	664521	junction_4	176898.16505849268	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	27	1574	50.0	-18	True	AATAAA	-20
PB.5048.2	chr17	+	2834	11	novel_in_catalog	NMT1	novel	4999	13	NA	NA	-7	-11	intron_retention	FALSE	canonical	1	664521	junction_4	171295.984554338	NA	2	NA	TRUE	NA	NA	NA	C	coding	515	1548	26	1573	55.0	-17	True	AATAAA	-19
PB.5048.3	chr17	+	2473	11	incomplete-splice_match	NMT1	ENST00000258960.6	4879	12	-7	3035	-7	-12	intron_retention	FALSE	canonical	1	664521	junction_4	171963.0557948131	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	26	1510	50.0	-17	True	AATAAA	-18
PB.1382.19	chr10	-	2158	4	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	-15	-2	any annotated donor/acceptor	FALSE	canonical	1	724344	junction_3	555872.8512266892	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	301	1545	35.0	3	True	AATAAA	-12
PB.1382.18	chr10	-	2305	5	novel_not_in_catalog	HNRNPF	novel	2755	3	NA	NA	41	-2	any annotated donor/acceptor	FALSE	canonical	1	7771	junction_1	727409.5435452353	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	448	1692	35.0	-1	True	AATAAA	-12
PB.8435.8	chr3	+	3011	4	full-splice_match	ZBTB38	ENST00000507722.5	593	4	-2	-2416	-2	459	multi-exon	FALSE	canonical	1	17194	junction_1	75182.85090069115	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2772	240	3011	55.0	-3	True	NA	NA
PB.3863.12	chr15	-	4401	26	incomplete-splice_match	TRPM7	ENST00000560955.5	7218	39	-29	31808	-3	1518	3prime_fragment	FALSE	canonical	1	139826	junction_5	33375.36562115238	NA	10	NA	TRUE	NA	NA	NA	C	coding	1378	4134	268	4401	65.0	-4	True	NA	NA
PB.4271.2	chr16	+	3217	9	full-splice_match	NDE1	ENST00000396354.5	3221	9	0	4	0	-4	multi-exon	FALSE	canonical	1	108777	junction_8	112891.43581418168	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	112	1119	30.0	-20	True	NA	NA
PB.1575.1	chr10	+	2960	6	novel_in_catalog	HOGA1	novel	2581	3	NA	NA	0	-11	intron_retention	FALSE	canonical	1	14725	junction_4	3095.823405816294	NA	0	NA	TRUE	NA	NA	NA	A	coding	133	402	1427	1828	50.0	0	True	AATAAA	-5
PB.9193.4	chr5	-	2800	15	full-splice_match	DAB2	ENST00000320816.10	4534	15	213	1521	2	-178	multi-exon	FALSE	canonical	1	266574	junction_14	69175.85991695369	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	256	2568	35.0	1	True	AATAAA	-17
PB.9193.1	chr5	-	4353	15	full-splice_match	DAB2	ENST00000320816.10	4534	15	178	3	-12	-3	multi-exon	FALSE	canonical	1	266574	junction_14	69175.85991695369	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	291	2603	30.0	-13	True	AATAAA	-39
PB.9193.3	chr5	-	3108	15	full-splice_match	DAB2	ENST00000320816.10	4534	15	65	1361	65	-18	multi-exon	FALSE	canonical	1	266574	junction_14	69175.85991695369	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	404	2716	15.0	92	False	AATAAA	-14
PB.9193.2	chr5	-	3266	15	full-splice_match	DAB2	ENST00000320816.10	4534	15	302	966	0	377	multi-exon	FALSE	canonical	1	266574	junction_14	69175.85991695369	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	167	2479	85.0	-1	True	NA	NA
PB.1009.1	chr1	+	2965	1	antisense	novelGene_UCHL5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.9777.11	chr6	+	3207	10	novel_in_catalog	MRS2	novel	3980	12	NA	NA	-9	-1	no_combination_of_known_junctions	FALSE	canonical	1	14108	junction_9	110607.27823059497	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	103	1320	45.0	9	True	AATAAA	-13
PB.9777.10	chr6	+	2099	11	novel_not_in_catalog	MRS2	novel	3980	12	NA	NA	-15	787	any annotated donor/acceptor	FALSE	canonical	1	8842	junction_8	96314.3939897355	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	109	1149	25.0	3	True	AATAAA	-20
PB.5200.1	chr17	+	2680	13	incomplete-splice_match	BPTF	ENST00000342579.8	10607	31	103396	1766	-7180	0	5prime_fragment	FALSE	canonical	1	214189	junction_8	115583.0478480012	NA	1	NA	TRUE	NA	NA	NA	B	coding	775	2328	90	2417	85.0	NA	False	NA	NA
PB.2347.1	chr11	+	2513	12	novel_in_catalog	CCDC15	novel	3924	16	NA	NA	6	-34365	no_combination_of_known_junctions	FALSE	canonical	1	18464	junction_8	14085.349063758906	NA	0	NA	TRUE	NA	NA	NA	B	coding	749	2247	266	2512	80.0	-32	True	NA	NA
PB.2347.3	chr11	+	2367	11	novel_in_catalog	CCDC15	novel	3924	16	NA	NA	38	-34365	no_combination_of_known_junctions	FALSE	canonical	1	1208	junction_4	17968.29158712647	NA	0	NA	TRUE	NA	NA	NA	B	coding	711	2133	234	2366	80.0	0	True	NA	NA
PB.2347.2	chr11	+	2606	13	incomplete-splice_match	CCDC15	ENST00000529051.5	3924	16	36	36303	36	-34365	3prime_fragment	FALSE	canonical	1	22062	junction_8	13557.388480445718	NA	0	NA	TRUE	NA	NA	NA	B	coding	790	2370	236	2605	80.0	-2	True	NA	NA
PB.8106.1	chr3	-	2688	23	novel_in_catalog	QARS	novel	887	6	NA	NA	-13	0	intron_retention	FALSE	canonical	1	923875	junction_22	368796.6591186595	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	706	2592	10.0	7023	False	AATAAA	-21
PB.8106.2	chr3	-	2575	24	novel_in_catalog	QARS	novel	887	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	37077	junction_22	522891.25429711683	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	26	2479	10.0	-2	True	AATAAA	-21
PB.8106.3	chr3	-	2449	24	full-splice_match	QARS	ENST00000306125.11	2827	24	377	1	0	0	multi-exon	FALSE	canonical	1	923875	junction_23	372603.2076994211	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2328	26	2353	10.0	-2	True	AATAAA	-21
PB.8106.4	chr3	-	2429	24	novel_in_catalog	QARS	novel	887	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2212	junction_3	511446.9574048003	NA	0	NA	TRUE	NA	NA	NA	C	coding	694	2085	26	2110	10.0	-2	True	AATAAA	-21
PB.8106.7	chr3	-	2389	24	full-splice_match	QARS	ENST00000430182.5	2399	24	7	3	2	1	multi-exon	FALSE	canonical	1	25051	junction_22	524615.2418223919	NA	0	NA	TRUE	NA	NA	NA	C	coding	630	1893	404	2296	15.0	6	True	AATAAA	-18
PB.4543.5	chr16	+	4167	27	full-splice_match	DHX38	ENST00000268482.7	4608	27	432	9	70	0	multi-exon	FALSE	canonical	1	287386	junction_1	92559.61645668952	NA	0	NA	TRUE	NA	NA	NA	C	coding	1227	3684	78	3761	35.0	70	False	AATAAA	-13
PB.4543.4	chr16	+	4175	26	novel_in_catalog	DHX38	novel	4608	27	NA	NA	-30	4	intron_retention	FALSE	canonical	1	14505	junction_3	126891.48457087889	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	178	3756	15.0	-30	False	AATAAA	-26
PB.4543.6	chr16	+	4513	26	novel_not_in_catalog	DHX38	novel	4608	27	NA	NA	65	0	intron_retention	FALSE	canonical	1	36139	junction_18	121426.41816425945	NA	8	NA	TRUE	NA	NA	NA	C	coding	698	2097	83	2179	35.0	65	False	AATAAA	-13
PB.4543.1	chr16	+	4143	28	novel_in_catalog	DHX38	novel	4608	27	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	24168	junction_27	121556.17433837132	NA	0	NA	TRUE	NA	NA	NA	C	coding	1227	3684	149	3832	35.0	-1	True	AATAAA	-13
PB.8174.3	chr3	-	3716	16	full-splice_match	NEK4	ENST00000233027.9	6057	16	9	2332	-1	996	multi-exon	FALSE	canonical	1	24740	junction_8	69834.68953069735	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	195	2720	5.0	-1	True	AATAAA	-18
PB.4543.3	chr16	+	4275	27	novel_not_in_catalog	DHX38	novel	4608	27	NA	NA	34	-1	intron_retention	FALSE	canonical	1	36139	junction_19	121344.5846025316	NA	1	NA	TRUE	NA	NA	NA	C	coding	874	2625	191	2815	15.0	-43	False	AATAAA	-21
PB.4543.2	chr16	+	4678	26	novel_in_catalog	DHX38	novel	4608	27	NA	NA	-10	0	intron_retention	FALSE	canonical	1	287386	junction_1	90631.00012754135	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	2533	4272	35.0	-10	True	AATAAA	-13
PB.5097.16	chr17	-	1779	11	novel_in_catalog	SPOP	novel	2985	11	NA	NA	-4	-19	combination_of_known_junctions	FALSE	canonical	1	4148	junction_9	223509.33720952243	NA	2	NA	TRUE	NA	NA	NA	C	coding	340	1023	404	1426	85.0	7	True	NA	NA
PB.5097.17	chr17	-	1615	10	full-splice_match	SPOP	ENST00000504102.5	1865	10	231	19	0	-19	multi-exon	FALSE	canonical	1	238796	junction_9	117088.65094933755	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	138	1262	85.0	33	True	NA	NA
PB.5097.14	chr17	-	1748	11	full-splice_match	SPOP	ENST00000347630.6	2965	11	78	1139	0	-19	multi-exon	FALSE	canonical	1	32742	junction_10	202833.28615592164	NA	8	2	TRUE	NA	NA	NA	C	coding	374	1125	271	1395	85.0	11	True	NA	NA
PB.5097.15	chr17	-	1778	12	novel_in_catalog	SPOP	novel	2985	11	NA	NA	-8	-19	combination_of_known_junctions	FALSE	canonical	1	11393	junction_10	225656.09521530365	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	301	1425	85.0	-27	True	NA	NA
PB.5097.12	chr17	-	1877	12	novel_in_catalog	SPOP	novel	2985	11	NA	NA	-6	-19	combination_of_known_junctions	FALSE	canonical	1	4087	junction_10	226771.3596327498	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	400	1524	85.0	5	True	NA	NA
PB.5097.13	chr17	-	1841	11	full-splice_match	SPOP	ENST00000393328.6	2985	11	3	1141	-1	-19	multi-exon	FALSE	canonical	1	4114	junction_9	211104.42613003167	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	364	1488	85.0	-11	True	NA	NA
PB.5097.10	chr17	-	2153	11	novel_in_catalog	SPOP	novel	2985	11	NA	NA	10	-32	combination_of_known_junctions	FALSE	canonical	1	37308	junction_10	202167.85883903503	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	180	1304	90.0	43	True	NA	NA
PB.5097.11	chr17	-	2142	10	novel_not_in_catalog	SPOP	novel	2985	11	NA	NA	1	-32	any annotated donor/acceptor	FALSE	canonical	1	241	junction_9	179770.44603240924	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	169	1293	90.0	15	True	NA	NA
PB.11414.2	chr8	-	1355	2	full-splice_match	COMMD5	ENST00000305103.3	1373	2	34	-16	3	-15	multi-exon	FALSE	canonical	1	139665	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	220	894	70.0	28	True	NA	NA
PB.942.1	chr1	+	2815	17	full-splice_match	DARS2	ENST00000649689.1	3332	17	518	-1	231	1	multi-exon	FALSE	canonical	1	198591	junction_7	42916.41355220161	NA	2	NA	TRUE	NA	NA	NA	C	coding	645	1938	40	1977	10.0	216	False	ATTAAA	-38
PB.11989.4	chrX	+	2739	8	novel_not_in_catalog	SCML1	novel	2704	6	NA	NA	558	-2	any annotated donor/acceptor	FALSE	canonical	1	421	junction_1	97826.59047059773	NA	6	NA	TRUE	NA	NA	NA	C	coding	329	990	159	1148	30.0	580	False	AATAAA	-18
PB.11989.2	chrX	+	2290	1	novel_in_catalog	SCML1	novel	2704	6	NA	NA	8	-10102	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	0	True	NA	NA
PB.11989.3	chrX	+	2592	6	full-splice_match	SCML1	ENST00000380045.7	2679	6	89	-2	6	-1	multi-exon	FALSE	canonical	1	56654	junction_1	62182.608668340705	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	371	997	30.0	-2	True	AATAAA	-22
PB.234.13	chr1	-	3363	1	novel_in_catalog	SRSF4	novel	2387	6	NA	NA	-10	-19154	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-3	True	NA	NA
PB.234.12	chr1	-	3537	1	novel_in_catalog	SRSF4	novel	2387	6	NA	NA	-10	-18980	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-3	True	NA	NA
PB.3234.1	chr13	+	1848	1	full-splice_match	DOCK9-DT	ENST00000562781.1	807	1	-1060	19	-1060	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	142	429	192	620	70.0	-869	False	TTTAAA	-3
PB.8174.2	chr3	-	3581	15	novel_in_catalog	NEK4	novel	6057	16	NA	NA	-3	997	combination_of_known_junctions	FALSE	canonical	1	56292	junction_8	62949.69138226532	NA	0	NA	TRUE	NA	NA	NA	C	coding	795	2388	197	2584	10.0	-3	True	AATAAA	-19
PB.11812.5	chr9	-	3862	11	full-splice_match	FAM102A	ENST00000373095.5	4144	11	-20	302	-20	0	multi-exon	FALSE	canonical	1	399719	junction_2	117096.88923195185	NA	1	NA	TRUE	NA	NA	NA	C	coding	384	1155	397	1551	5.0	-1	True	AATAAA	-14
PB.8967.3	chr4	+	2118	2	full-splice_match	BBS12	ENST00000314218.7	3244	2	61	1065	-34	-1064	multi-exon	FALSE	canonical	1	30226	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1980	139	2118	35.0	1	True	AATAAA	-22
PB.8967.2	chr4	+	2346	2	full-splice_match	BBS12	ENST00000314218.7	3244	2	56	842	-39	-841	multi-exon	FALSE	canonical	1	30226	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	144	2270	30.0	-4	True	AATAAA	-19
PB.8967.1	chr4	+	3193	2	full-splice_match	BBS12	ENST00000314218.7	3244	2	53	-2	-42	2	multi-exon	FALSE	canonical	1	30226	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	147	2273	25.0	-7	True	NA	NA
PB.942.2	chr1	+	2700	16	full-splice_match	DARS2	ENST00000647730.1	3133	16	-82	515	13	12	multi-exon	FALSE	canonical	1	3469	junction_2	86837.03235791106	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	859	2520	25.0	-12	True	GATAAA	-21
PB.8122.8	chr3	-	4210	6	full-splice_match	IP6K1	ENST00000321599.8	4456	6	-23	269	-8	-268	multi-exon	FALSE	canonical	1	114156	junction_5	89618.9935886361	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	344	1651	15.0	-9	True	AATATA	-32
PB.497.3	chr1	+	3196	10	full-splice_match	PRKACB	ENST00000370689.6	4513	10	-3	1320	-3	-1316	multi-exon	FALSE	canonical	1	112517	junction_1	138970.72009741858	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	268	1323	35.0	-20	True	AATAAA	-17
PB.12260.3	chrX	+	2409	15	novel_not_in_catalog	UTP14A	novel	2403	14	NA	NA	-14	-1	any annotated donor/acceptor	FALSE	canonical	1	4614	junction_13	84752.6533783962	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	43	1905	25.0	4	True	AATAAA	-16
PB.12260.2	chrX	+	2511	15	full-splice_match	UTP14A	ENST00000394422.7	2488	15	-23	0	-23	0	multi-exon	FALSE	canonical	1	27523	junction_10	80559.5470002324	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	52	2367	20.0	-5	True	AATAAA	-17
PB.12260.1	chrX	+	2744	15	novel_not_in_catalog	UTP14A	novel	2403	14	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	16847	junction_10	81666.20871013135	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	1252	2601	25.0	-49	False	AATAAA	-16
PB.989.1	chr1	-	6385	20	full-splice_match	EDEM3	ENST00000318130.12	6898	20	245	268	205	4	multi-exon	FALSE	canonical	1	96207	junction_19	44966.40902069084	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	23	2821	30.0	-23	True	AATAAA	-21
PB.989.6	chr1	-	5194	19	novel_not_in_catalog	EDEM3	novel	6898	20	NA	NA	10	-1339	intron_retention	FALSE	canonical	1	5109	junction_18	69541.18801390873	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	403	2973	85.0	-6	True	AGTAAA	-6
PB.989.7	chr1	-	2393	19	novel_not_in_catalog	EDEM3	novel	6898	20	NA	NA	226	-8343	any annotated donor/acceptor	FALSE	canonical	1	36684	junction_4	59935.64621430675	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2262	131	2392	45.0	-2	True	GATAAA	-14
PB.989.4	chr1	-	5033	20	full-splice_match	EDEM3	ENST00000318130.12	6898	20	254	1611	214	-1339	multi-exon	FALSE	canonical	1	96207	junction_19	44966.40902069084	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	14	2812	85.0	-14	True	AGTAAA	-6
PB.989.5	chr1	-	5220	20	novel_not_in_catalog	EDEM3	novel	6898	20	NA	NA	4	-1339	intron_retention	FALSE	canonical	1	7775	junction_4	62745.02243378408	NA	1	NA	TRUE	NA	NA	NA	C	coding	913	2742	258	2999	85.0	-46	False	AGTAAA	-6
PB.635.21	chr1	-	3703	20	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	1	-20	any annotated donor/acceptor	FALSE	canonical	1	2198	junction_1	1754636.0421590272	NA	8	1	TRUE	NA	NA	NA	C	coding	805	2418	445	2862	90.0	1	True	NA	NA
PB.497.1	chr1	+	4231	10	full-splice_match	PRKACB	ENST00000370689.6	4513	10	31	251	31	-247	multi-exon	FALSE	canonical	1	112517	junction_1	138970.72009741858	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	234	1289	55.0	-72	False	NA	NA
PB.942.7	chr1	+	2538	16	incomplete-splice_match	DARS2	ENST00000649689.1	3332	17	-40	1610	-20	-941	3prime_fragment	FALSE	canonical	1	198591	junction_7	40669.751535781754	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	598	2370	40.0	1	True	TATAAA	-18
PB.8122.7	chr3	-	4392	7	novel_not_in_catalog	IP6K1	novel	4456	6	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	135308.82880829406	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	337	1644	10.0	-2	True	AATAAA	-12
PB.497.6	chr1	+	1833	9	novel_in_catalog	PRKACB	novel	4513	10	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	1	27907	junction_8	205538.597036504	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	253	1029	45.0	-5	True	AATAAA	-19
PB.4126.2	chr16	-	1104	6	full-splice_match	MRPL28	ENST00000199706.12	1098	6	-18	12	-18	0	multi-exon	FALSE	canonical	1	441459	junction_5	377116.7646864827	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	55	825	5.0	-8	True	AGTAAA	-14
PB.4126.1	chr16	-	1527	5	full-splice_match	MRPL28	ENST00000483764.5	1512	5	-27	12	-9	0	multi-exon	FALSE	canonical	1	441459	junction_4	421480.00076901633	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	46	582	5.0	1	True	AGTAAA	-14
PB.993.5	chr1	+	2860	6	novel_not_in_catalog	SWT1	novel	3001	19	NA	NA	129	-2091	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	18596.878604755155	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	16	True	NA	NA
PB.10807.3	chr7	+	1835	12	full-splice_match	ING3	ENST00000315870.9	3777	12	28	1914	-8	12	multi-exon	FALSE	canonical	1	140813	junction_5	40291.26503534929	NA	2	NA	TRUE	NA	NA	NA	C	coding	418	1257	121	1377	60.0	0	True	TATAAA	-34
PB.8122.2	chr3	-	4479	6	full-splice_match	IP6K1	ENST00000321599.8	4456	6	-24	1	-9	0	multi-exon	FALSE	canonical	1	114156	junction_5	89618.9935886361	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	345	1652	15.0	-10	True	AATAAA	-15
PB.993.4	chr1	+	1360	5	novel_not_in_catalog	SWT1	novel	3001	19	NA	NA	67	-3784	any annotated donor/acceptor	FALSE	canonical	1	4817	junction_1	17380.92975792722	NA	0	NA	TRUE	NA	NA	NA	C	coding	75	228	94	321	70.0	-9153	False	AAGAAA	-34
PB.11696.10	chr9	+	2489	17	incomplete-splice_match	SMC2	ENST00000374793.7	5909	25	-19	18185	11	-16419	3prime_fragment	FALSE	canonical	1	98609	junction_1	67768.44573054908	NA	14	NA	TRUE	NA	NA	NA	C	coding	752	2256	233	2488	45.0	-14	True	NA	NA
PB.10618.10	chr7	-	5242	16	novel_in_catalog	POM121C	novel	4073	2	NA	NA	-28	-680	no_combination_of_known_junctions	FALSE	canonical	1	3766	junction_5	153902.95179971913	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	953	3916	75.0	-1	True	NA	NA
PB.8122.3	chr3	-	4250	6	novel_not_in_catalog	IP6K1	novel	4456	6	NA	NA	-23	0	any annotated donor/acceptor	FALSE	canonical	1	191	junction_4	166884.18979471963	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	593	1423	15.0	-24	False	AATAAA	-15
PB.9814.1	chr6	+	1976	2	intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1417	junction_1	0.0	NA	9	1	FALSE	NA	NA	NA	A	coding	270	813	703	1515	70.0	0	True	NA	NA
PB.3505.10	chr14	+	4331	12	novel_in_catalog	FUT8	novel	5166	11	NA	NA	-259	5	no_combination_of_known_junctions	FALSE	canonical	1	4095	junction_1	130205.56630285794	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	888	2615	30.0	17	True	AATAAA	-21
PB.3505.11	chr14	+	3976	11	novel_in_catalog	FUT8	novel	5166	11	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	1	112108	junction_1	82258.61441332451	NA	3	NA	TRUE	NA	NA	NA	C	coding	575	1728	544	2271	40.0	-25	True	AATAAA	-10
PB.3505.12	chr14	+	3320	12	novel_in_catalog	FUT8	novel	5166	11	NA	NA	-258	-26	no_combination_of_known_junctions	FALSE	canonical	1	4095	junction_1	130205.56630285794	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	887	2614	70.0	18	True	NA	NA
PB.3505.13	chr14	+	2754	10	novel_in_catalog	FUT8	novel	5166	11	NA	NA	-216	-26	combination_of_known_junctions	FALSE	canonical	1	2558	junction_2	124354.95474648367	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	810	2048	70.0	60	True	NA	NA
PB.3505.14	chr14	+	1775	8	novel_in_catalog	FUT8	novel	5166	11	NA	NA	-214	54	combination_of_known_junctions	FALSE	canonical	1	112108	junction_1	92825.2391245539	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	993	782	1774	65.0	62	True	NA	NA
PB.8559.5	chr3	+	3027	9	incomplete-splice_match	AP2M1	ENST00000382456.7	2091	11	184	1	-9	-1	intron_retention	FALSE	canonical	1	1289854	junction_4	1225745.2569284062	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	131	1189	15.0	18	True	AATAAA	-14
PB.8559.6	chr3	+	1976	11	novel_not_in_catalog	AP2M1	novel	2091	11	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	2025734.1546417905	NA	1	1	TRUE	NA	NA	NA	C	coding	280	843	660	1502	15.0	42	True	AATAAA	-14
PB.7485.5	chr21	+	3239	3	novel_not_in_catalog	BACH1	novel	325	2	NA	NA	-26	-2105	any annotated donor/acceptor	FALSE	canonical	1	15962	junction_1	11761.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	43	132	167	298	100.0	-1933	False	NA	NA
PB.8435.3	chr3	+	6912	6	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	28	517	intron_retention	FALSE	canonical	1	110623	junction_4	32738.395497641603	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	597	4184	25.0	0	True	ATTAAA	-19
PB.3887.4	chr15	-	2941	29	full-splice_match	NEDD4	ENST00000435532.7	5869	29	92	2836	6	-2423	multi-exon	FALSE	canonical	1	111113	junction_25	27389.641475531644	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	100	2802	50.0	-43	True	TATAAA	-10
PB.497.9	chr1	+	1814	9	novel_in_catalog	PRKACB	novel	4513	10	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	37224	junction_8	188345.54985746113	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	95	1009	40.0	-3	True	AATAAA	-20
PB.3887.1	chr15	-	5748	29	full-splice_match	NEDD4	ENST00000435532.7	5869	29	111	10	-22	-10	multi-exon	FALSE	canonical	1	111113	junction_25	27389.641475531644	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	81	2783	65.0	-24	True	AATAAA	-18
PB.6477.5	chr2	-	3873	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	67	471	-1	-167	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	2	NA	TRUE	NA	NA	NA	C	coding	783	2352	21	2372	60.0	-9	True	NA	NA
PB.3887.3	chr15	-	4365	29	full-splice_match	NEDD4	ENST00000435532.7	5869	29	153	1351	9	-938	multi-exon	FALSE	canonical	1	111113	junction_25	27389.641475531644	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	39	2741	30.0	18	True	AATATA	-28
PB.3887.2	chr15	-	5141	29	full-splice_match	NEDD4	ENST00000435532.7	5869	29	144	584	0	-171	multi-exon	FALSE	canonical	1	111113	junction_25	27389.641475531644	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	48	2750	20.0	9	True	AATACA	-13
PB.11717.1	chr9	-	1591	10	full-splice_match	PTGR1	ENST00000309195.9	1223	10	-9	-359	-9	-31	multi-exon	FALSE	canonical	1	273310	junction_8	169781.92353264362	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	89	1078	75.0	-9	True	NA	NA
PB.6477.4	chr2	-	4030	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	73	308	5	-4	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	15	2366	60.0	-3	True	NA	NA
PB.8977.8	chr4	-	2160	9	novel_not_in_catalog	MFSD8	novel	4991	12	NA	NA	-1	8	intron_retention	FALSE	canonical	0	0	junction_2	39665.77629708008	NA	33	3	TRUE	NA	NA	NA	C	coding	229	690	12	701	25.0	3	True	AATAAA	-20
PB.9628.10	chr5	+	2936	11	full-splice_match	SFXN1	ENST00000321442.9	4231	11	166	1129	-3	-1129	multi-exon	FALSE	canonical	1	522527	junction_7	115766.51700487494	NA	1	NA	TRUE	NA	NA	NA	C	coding	322	969	89	1057	0.0	-8	True	CATAAA	-17
PB.8977.4	chr4	-	3003	12	full-splice_match	MFSD8	ENST00000641686.1	4991	12	499	1489	1	-6	multi-exon	FALSE	canonical	1	32817	junction_5	21445.92640623127	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	38	1594	80.0	-23	True	NA	NA
PB.8977.5	chr4	-	2091	12	full-splice_match	MFSD8	ENST00000641686.1	4991	12	500	2400	2	57	multi-exon	FALSE	canonical	1	32817	junction_5	21445.92640623127	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	37	1593	65.0	-22	True	TATAAA	-34
PB.8977.6	chr4	-	2567	11	full-splice_match	MFSD8	ENST00000642042.1	2303	11	33	-297	1	1	multi-exon	FALSE	canonical	1	32817	junction_4	22481.411538424363	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	15	1382	35.0	0	True	AATAAA	-18
PB.8977.7	chr4	-	2304	11	full-splice_match	MFSD8	ENST00000642042.1	2303	11	12	-13	3	13	multi-exon	FALSE	canonical	1	32817	junction_4	22481.411538424363	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	36	1403	10.0	-21	True	AATAAA	-25
PB.8977.1	chr4	-	4420	12	full-splice_match	MFSD8	ENST00000641686.1	4991	12	497	74	-1	-2	multi-exon	FALSE	canonical	1	32817	junction_5	21445.92640623127	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	40	1596	35.0	-25	True	AATAAA	-21
PB.8977.2	chr4	-	5099	11	full-splice_match	MFSD8	ENST00000642042.1	2303	11	16	-2812	0	-2	multi-exon	FALSE	canonical	1	32817	junction_4	22481.411538424363	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	32	1399	35.0	-17	True	AATAAA	-21
PB.8977.3	chr4	-	4314	11	incomplete-splice_match	MFSD8	ENST00000515130.6	3314	12	822	-1408	0	-3	5prime_fragment	FALSE	canonical	1	2970	junction_10	34200.456342569465	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	210	1049	35.0	-26	True	AATAAA	-20
PB.383.2	chr1	-	5561	10	novel_not_in_catalog	PIK3R3	novel	5609	10	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	1062	junction_9	62406.19778515592	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	777	2030	20.0	-23	True	AATAAA	-17
PB.589.8	chr1	+	3992	7	novel_not_in_catalog	SARS	novel	1852	11	NA	NA	1	12	intron_retention	FALSE	canonical	1	36533	junction_1	849705.725579679	NA	5	NA	TRUE	NA	NA	NA	C	coding	109	330	1379	1708	5.0	1	True	AATAAA	-29
PB.635.26	chr1	-	3293	19	full-splice_match	CSDE1	ENST00000534699.5	2667	19	-1	-625	0	-20	multi-exon	FALSE	canonical	1	94441	junction_18	1857962.9867552621	NA	2	NA	TRUE	NA	NA	NA	C	coding	798	2397	60	2456	90.0	-1	True	NA	NA
PB.589.9	chr1	+	1835	11	full-splice_match	SARS	ENST00000234677.6	1852	11	22	-5	8	5	multi-exon	FALSE	canonical	1	1388592	junction_6	379963.7214595757	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	54	1598	10.0	22	True	AATAAA	-22
PB.11124.5	chr8	+	3137	17	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	-2	4	any annotated donor/acceptor	FALSE	canonical	1	136	junction_2	321896.349577561	NA	2	NA	TRUE	NA	NA	NA	C	coding	813	2442	211	2652	100.0	-23	True	NA	NA
PB.589.6	chr1	+	2827	9	novel_not_in_catalog	SARS	novel	1852	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	36533	junction_1	737019.2797316685	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	273	1289	15.0	0	True	AATAAA	-17
PB.11124.7	chr8	+	1971	13	incomplete-splice_match	MCM4	ENST00000648407.1	2598	15	38	5598	0	-26	3prime_fragment	FALSE	canonical	1	413119	junction_2	257623.19941626416	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1878	94	1971	70.0	-21	True	NA	NA
PB.11124.6	chr8	+	3824	17	full-splice_match	MCM4	ENST00000649973.1	4062	17	5	233	-3	-233	multi-exon	FALSE	canonical	1	413119	junction_2	251415.87070584335	NA	18	NA	TRUE	NA	NA	NA	C	coding	863	2592	84	2675	20.0	-11	True	AATAAA	-15
PB.11124.1	chr8	+	3018	18	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	-13	-237	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	339274.35497233825	NA	2	1	TRUE	NA	NA	NA	C	coding	863	2592	145	2736	30.0	-2058	False	AATAAA	-11
PB.10249.3	chr6	-	8849	10	full-splice_match	HIVEP2	ENST00000367603.7	9724	10	25	850	25	-839	multi-exon	FALSE	canonical	1	2913	junction_9	88710.73834048267	NA	0	NA	TRUE	NA	NA	NA	A	coding	2446	7341	719	8059	30.0	-1	True	ATTAAA	-21
PB.11124.3	chr8	+	2829	17	full-splice_match	MCM4	ENST00000649973.1	4062	17	1	1232	1	8	multi-exon	FALSE	canonical	1	413119	junction_2	251415.87070584335	NA	1	NA	TRUE	NA	NA	NA	C	coding	863	2592	88	2679	20.0	-15	True	CATAAA	-26
PB.589.7	chr1	+	2459	10	novel_not_in_catalog	SARS	novel	1852	11	NA	NA	0	2	intron_retention	FALSE	canonical	1	36533	junction_1	718507.3838013852	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	1380	2225	15.0	0	True	AATAAA	-19
PB.7485.3	chr21	+	5757	6	novel_not_in_catalog	BACH1	novel	325	2	NA	NA	29	-2	any annotated donor/acceptor	FALSE	canonical	1	15962	junction_1	163673.6859468864	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	234	2444	40.0	3	True	AATAAA	-25
PB.11124.9	chr8	+	2028	13	novel_not_in_catalog	MCM4	novel	572	5	NA	NA	2	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	340968.7857866253	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	92	1672	30.0	-19	True	AATAAA	-18
PB.589.4	chr1	+	3472	8	novel_not_in_catalog	SARS	novel	1852	11	NA	NA	0	8	intron_retention	FALSE	canonical	1	36533	junction_1	787782.0205921204	NA	3	1	TRUE	NA	NA	NA	C	coding	172	519	1380	1898	15.0	0	True	NA	NA
PB.8546.1	chr3	-	2394	18	novel_in_catalog	MCCC1	novel	2545	19	NA	NA	3	-1	intron_retention	FALSE	canonical	1	27737	junction_16	84670.4208383375	NA	1	NA	TRUE	NA	NA	NA	C	coding	616	1851	325	2175	20.0	3722	False	AATAAA	-27
PB.589.5	chr1	+	3044	2	full-splice_match	SARS	ENST00000482384.1	804	2	-14	-2226	0	2226	multi-exon	FALSE	canonical	1	158267	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.2126.1	chr11	+	3870	15	full-splice_match	IGHMBP2	ENST00000255078.7	3961	15	65	26	10	-26	multi-exon	FALSE	canonical	1	64574	junction_8	24112.17054239013	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2982	47	3028	60.0	0	True	TATAAA	-7
PB.2126.2	chr11	+	2635	13	incomplete-splice_match	IGHMBP2	ENST00000255078.7	3961	15	63	3532	8	0	3prime_fragment	FALSE	canonical	1	64574	junction_8	25367.76239680657	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2586	49	2634	75.0	-2	True	NA	NA
PB.6190.3	chr19	-	4633	5	novel_in_catalog	ZNF28	novel	5171	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	308	junction_1	8820.267665297919	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	534	2354	20.0	-1	False	NA	NA
PB.6190.2	chr19	-	4752	6	novel_not_in_catalog	ZNF28	novel	5171	2	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	196	junction_5	10118.543373430783	NA	8	2	TRUE	NA	NA	NA	C	coding	606	1821	653	2473	20.0	-1	False	NA	NA
PB.6190.1	chr19	-	4677	5	novel_in_catalog	ZNF28	novel	5171	2	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	1373	junction_1	8426.802967318034	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	576	2396	20.0	-1	False	NA	NA
PB.7296.2	chr20	+	4676	32	incomplete-splice_match	PLCG1	ENST00000244007.7	5285	33	534	560	-56	-560	5prime_fragment	FALSE	canonical	1	240228	junction_1	124451.19480335795	NA	0	NA	TRUE	NA	NA	NA	B	coding	1291	3876	149	4024	35.0	-49	True	NA	NA
PB.6190.7	chr19	-	4922	6	novel_not_in_catalog	ZNF28	novel	5171	2	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1373	junction_1	8719.458478598312	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	649	2643	20.0	-1	False	NA	NA
PB.7296.4	chr20	+	5760	29	novel_in_catalog	PLCG1	novel	5285	33	NA	NA	-37	-1	intron_retention	FALSE	canonical	1	240228	junction_1	113167.07335891676	NA	0	NA	TRUE	NA	NA	NA	B	coding	1015	3048	1502	4549	10.0	-30	True	AATAAA	-20
PB.6190.5	chr19	-	4446	3	full-splice_match	ZNF28	ENST00000391783.6	1827	3	20	-2639	-16	0	multi-exon	FALSE	canonical	1	8061	junction_1	1712.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	173	2167	20.0	-17	False	NA	NA
PB.6190.4	chr19	-	4567	4	full-splice_match	ZNF28	ENST00000457749.6	4556	4	-11	0	-10	0	multi-exon	FALSE	canonical	1	11485	junction_3	3973.094204213582	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	132	2288	20.0	-11	False	NA	NA
PB.2774.3	chr12	-	2842	1	incomplete-splice_match	E2F7	ENST00000322886.11	5740	13	41485	7	26646	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	7682	False	AATAAA	-13
PB.2774.2	chr12	-	5725	13	full-splice_match	E2F7	ENST00000322886.11	5740	13	9	6	-4	-5	multi-exon	FALSE	canonical	1	61091	junction_12	18160.59495687022	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	228	2963	35.0	-19	True	AATAAA	-14
PB.5673.10	chr19	-	1211	6	full-splice_match	ELAVL1	ENST00000407627.6	6015	6	-42	4846	9	205	multi-exon	FALSE	canonical	1	114946	junction_5	350748.651086444	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	173	1153	20.0	-10	True	AATAGA	-28
PB.5673.11	chr19	-	2227	2	incomplete-splice_match	ELAVL1	ENST00000593807.1	856	6	11	26129	11	-16871	3prime_fragment	FALSE	canonical	1	114946	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	565	1023	35.0	-8	True	AATAAA	-28
PB.11502.3	chr9	+	1047	8	full-splice_match	CHMP5	ENST00000223500.8	1477	8	63	367	63	221	multi-exon	FALSE	canonical	1	403878	junction_7	315576.148312374	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	75	734	35.0	-775	False	AATAAA	-27
PB.2629.1	chr12	-	2842	10	full-splice_match	RARG	ENST00000425354.6	2959	10	117	0	53	0	multi-exon	FALSE	canonical	1	70150	junction_8	127447.1586926892	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	372	1736	20.0	52	False	AATAAA	-14
PB.2629.2	chr12	-	2577	8	full-splice_match	RARG	ENST00000338561.9	1836	8	20	-761	20	0	multi-exon	FALSE	canonical	1	51445	junction_7	121627.50210946435	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	140	1471	20.0	14	True	AATAAA	-14
PB.2629.3	chr12	-	3080	11	novel_in_catalog	RARG	novel	2640	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	9213	junction_8	144147.1795958561	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	349	1974	20.0	-43	False	AATAAA	-14
PB.8546.2	chr3	-	2450	19	full-splice_match	MCCC1	ENST00000265594.8	2545	19	93	2	1	0	multi-exon	FALSE	canonical	1	200536	junction_14	58722.02910777139	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	55	2232	20.0	1	True	AATAAA	-26
PB.7045.2	chr2	-	7271	56	full-splice_match	DOCK10	ENST00000409592.7	7288	56	15	2	15	-2	multi-exon	FALSE	canonical	1	61501	junction_55	45015.85800434963	NA	0	NA	TRUE	NA	NA	NA	C	coding	2180	6543	100	6642	15.0	-2	True	AATAAA	-17
PB.7129.3	chr20	+	2917	5	novel_not_in_catalog	PSMF1	novel	3686	8	NA	NA	5	13196	any annotated donor/acceptor	FALSE	canonical	1	4127	junction_4	739180.5779068384	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	172	744	25.0	-18	True	AATAAA	-21
PB.6880.7	chr2	+	1765	4	incomplete-splice_match	ITGA4	ENST00000339307.8	1403	5	170	-1	-27	1	intron_retention	FALSE	canonical	1	293664	junction_3	63464.13465012258	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	339	845	5.0	-9	True	AATAAA	-20
PB.277.21	chr1	-	2231	11	novel_not_in_catalog	SFPQ	novel	464	6	NA	NA	4	-1212	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	1660967.9818515347	NA	2	1	TRUE	NA	NA	NA	C	coding	607	1824	96	1919	65.0	0	True	NA	NA
PB.277.20	chr1	-	4960	9	novel_in_catalog	SFPQ	novel	464	6	NA	NA	3	-1191	intron_retention	FALSE	canonical	1	1297136	junction_8	1320912.976700088	NA	7	NA	TRUE	NA	NA	NA	C	coding	679	2040	97	2136	30.0	-1	True	AATAAA	-15
PB.277.22	chr1	-	1621	5	incomplete-splice_match	SFPQ	ENST00000357214.5	3747	10	3	6341	3	-6341	3prime_fragment	FALSE	canonical	1	1297136	junction_4	830420.8937949403	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1524	97	1620	65.0	-1	True	NA	NA
PB.5415.2	chr18	+	1816	4	full-splice_match	SNRPD1	ENST00000300413.9	4909	4	22	3071	22	974	multi-exon	FALSE	canonical	1	205518	junction_3	595766.7384227563	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	142	501	50.0	-53	True	AGTAAA	-13
PB.5415.3	chr18	+	1619	4	full-splice_match	SNRPD1	ENST00000300413.9	4909	4	69	3221	5	824	multi-exon	FALSE	canonical	1	205518	junction_3	595766.7384227563	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	95	454	40.0	-6	True	TTTAAA	-27
PB.5415.1	chr18	+	2247	5	novel_not_in_catalog	SNRPD1	novel	4909	4	NA	NA	14	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	649534.2808655291	NA	1	1	TRUE	NA	NA	NA	C	coding	119	360	150	509	0.0	-61	True	AATAAA	-19
PB.7485.1	chr21	+	5648	5	full-splice_match	BACH1	ENST00000286800.7	5669	5	18	3	18	-3	multi-exon	FALSE	canonical	1	120279	junction_1	106007.32492733697	NA	2	NA	TRUE	NA	NA	NA	C	coding	736	2211	126	2336	40.0	-1889	False	AATAAA	-24
PB.11353.4	chr8	-	3360	18	novel_not_in_catalog	TRAPPC9	novel	6917	23	NA	NA	33	-1	any annotated donor/acceptor	FALSE	canonical	1	2800	junction_10	102834.88181330836	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	84	1505	25.0	540	False	NA	NA
PB.275.10	chr1	-	4496	16	novel_not_in_catalog	AC114490.2	novel	3099	17	NA	NA	-207	-6640	any annotated donor/acceptor	FALSE	canonical	1	6722	junction_1	58595.49922609718	NA	0	NA	TRUE	NA	NA	NA	B	coding	733	2202	209	2410	30.0	-4	True	NA	NA
PB.4116.7	chr15	-	2619	6	novel_in_catalog	TM2D3	novel	1267	5	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1499	junction_4	216735.81508500158	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	1446	1994	30.0	-1	True	AATAAA	-11
PB.4116.6	chr15	-	2869	4	novel_in_catalog	TM2D3	novel	1267	5	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	320031	junction_3	95986.76161151945	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	17	496	30.0	3	True	AATAAA	-11
PB.4116.5	chr15	-	1311	5	full-splice_match	TM2D3	ENST00000347970.7	1329	5	10	8	0	-3	multi-exon	FALSE	canonical	1	320031	junction_4	86866.63657872337	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	21	686	30.0	-1	True	AATAAA	-11
PB.4116.4	chr15	-	1389	6	full-splice_match	TM2D3	ENST00000333202.7	1381	6	-14	6	0	-3	multi-exon	FALSE	canonical	1	117905	junction_5	179029.09152939363	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	21	764	30.0	-1	True	AATAAA	-11
PB.4116.2	chr15	-	2930	5	novel_in_catalog	TM2D3	novel	1267	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	117905	junction_4	166837.4669588639	NA	1	NA	TRUE	NA	NA	NA	C	coding	182	549	1753	2301	15.0	-4	True	AATAAA	-15
PB.4116.1	chr15	-	2246	5	full-splice_match	TM2D3	ENST00000428002.6	1267	5	-2	-977	-2	977	multi-exon	FALSE	canonical	1	28509	junction_1	203157.7432444737	NA	2	NA	TRUE	NA	NA	NA	C	coding	183	552	18	569	35.0	2	True	NA	NA
PB.6880.6	chr2	+	1812	10	full-splice_match	ITGA4	ENST00000465522.5	1721	10	-34	-57	-34	57	multi-exon	FALSE	canonical	1	236407	junction_5	78385.98323270574	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	346	1446	30.0	-16	True	NA	NA
PB.7823.1	chr22	+	5001	4	novel_not_in_catalog	C22orf46	novel	815	3	NA	NA	12	-1	any annotated donor/acceptor	FALSE	canonical	1	37139	junction_1	12200.260224911415	NA	1	NA	TRUE	NA	NA	NA	A	coding	299	900	1053	1952	5.0	-22	True	AATAAA	-14
PB.4116.9	chr15	-	4467	1	novel_in_catalog	TM2D3	novel	1353	6	NA	NA	0	-1301	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-2	True	NA	NA
PB.9066.1	chr4	-	6353	3	full-splice_match	MFAP3L	ENST00000361618.3	6318	3	-37	2	-15	-2	multi-exon	FALSE	canonical	1	6480	junction_2	18137.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	346	1575	15.0	6557	False	AATAAA	-20
PB.9066.2	chr4	-	6480	4	novel_in_catalog	MFAP3L	novel	5827	2	NA	NA	-12	-6	intron_retention	FALSE	canonical	1	13382	junction_3	12295.000673263728	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	477	1706	10.0	6560	False	AATAAA	-16
PB.9066.3	chr4	-	5893	2	full-splice_match	MFAP3L	ENST00000512698.1	564	2	-105	-5224	9	-7	multi-exon	FALSE	canonical	1	4227	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	200	1120	10.0	0	True	AATAAA	-15
PB.1754.1	chr11	+	1506	8	full-splice_match	CD151	ENST00000397421.5	1486	8	-17	-3	3	2	multi-exon	TRUE	canonical	1	640525	junction_1	1176726.2398993026	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	100	861	20.0	-10007	False	NA	NA
PB.1754.2	chr11	+	1568	9	full-splice_match	CD151	ENST00000397420.8	1658	9	92	-2	3	2	multi-exon	FALSE	canonical	1	846775	junction_1	1170089.747793198	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	162	923	20.0	-10007	False	NA	NA
PB.1754.3	chr11	+	1820	7	novel_in_catalog	CD151	novel	1658	9	NA	NA	-8	0	intron_retention	FALSE	canonical	1	640525	junction_1	1240099.7332898157	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	804	1178	15.0	-9998	False	NA	NA
PB.1754.4	chr11	+	1855	8	full-splice_match	CD151	ENST00000532045.6	1835	8	-25	5	-2	0	multi-exon	FALSE	canonical	1	846775	junction_1	1207949.6127311548	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	843	1217	15.0	15	True	NA	NA
PB.3012.1	chr12	+	1541	1	incomplete-splice_match	BRI3BP	ENST00000341446.8	6648	3	35942	49	35942	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	3304	False	AATAAA	-11
PB.1075.8	chr1	+	3099	5	novel_not_in_catalog	RASSF5	novel	2064	6	NA	NA	5675	-1	any annotated donor/acceptor	FALSE	canonical	1	1441	junction_1	154708.4921721736	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	220	795	30.0	-1705	False	AATAAA	-26
PB.6497.32	chr2	+	2153	10	incomplete-splice_match	EHBP1	ENST00000431489.5	5076	23	249773	3	-100	-3	5prime_fragment	FALSE	canonical	1	131027	junction_2	92303.49879849867	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	225	1169	25.0	NA	False	AATAAA	-21
PB.12394.3	chrX	+	2555	7	full-splice_match	VAMP7	ENST00000262640.11	2496	7	-60	1	22	-1	multi-exon	FALSE	canonical	1	194	junction_5	9571.880822086232	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	144	926	20.0	-30	True	AATAAA	-20
PB.12394.2	chrY	+	2563	7	full-splice_match	VAMP7	ENST00000488344.6_PAR_Y	696	7	-46	-1821	21	-4	multi-exon	FALSE	canonical	1	16	junction_2	148.5077626104291	NA	2	1	TRUE	NA	NA	NA	C	coding	119	360	390	749	25.0	NA	False	AATAAA	-17
PB.12394.1	chrY	+	2718	8	full-splice_match	VAMP7	ENST00000286448.11_PAR_Y	2646	8	-76	4	-76	-4	multi-exon	FALSE	canonical	1	30	junction_1	140.34636454435264	NA	1	NA	TRUE	NA	NA	NA	C	coding	220	663	242	904	25.0	NA	False	AATAAA	-17
PB.1075.3	chr1	+	3306	6	novel_not_in_catalog	RASSF5	novel	2064	6	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	140761.5195180842	NA	6	NA	TRUE	NA	NA	NA	C	coding	265	798	220	1017	50.0	0	True	AATAAA	-11
PB.1075.4	chr1	+	3214	6	novel_not_in_catalog	RASSF5	novel	2064	6	NA	NA	-1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	140761.5195180842	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	128	925	50.0	0	True	AATAAA	-11
PB.2702.1	chr12	+	3701	13	novel_not_in_catalog	MBD6	novel	568	6	NA	NA	-46	1368	any annotated donor/acceptor	FALSE	canonical	1	2201	junction_12	119259.88061823805	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	403	3342	80.0	-1	True	NA	NA
PB.12394.5	chrY	+	2571	7	novel_in_catalog	VAMP7	novel	2646	8	NA	NA	-32	-5	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.96892957297408	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	399	758	25.0	NA	False	AATAAA	-16
PB.12394.4	chrX	+	1844	8	full-splice_match	VAMP7	ENST00000286448.11	2646	8	22	780	22	-780	multi-exon	FALSE	canonical	1	1425	junction_1	11140.97158771924	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	144	806	20.0	-30	True	AATAAA	-13
PB.8292.11	chr3	-	3182	6	full-splice_match	GCSAM	ENST00000470085.5	1072	6	9	-2119	2	-265	multi-exon	FALSE	canonical	1	29832	junction_4	85877.4653389351	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	495	833	45.0	-4	True	ATTAAA	-16
PB.10839.2	chr7	+	2190	1	incomplete-splice_match	KLHDC10	ENST00000335420.9	6437	10	63001	20	17066	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-11
PB.2637.28	chr12	+	2803	15	full-splice_match	PCBP2	ENST00000546463.5	1457	15	-222	-1124	1	0	multi-exon	FALSE	canonical	1	457962	junction_3	1863319.2450316974	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	350	1438	15.0	1	True	AGTAAA	-17
PB.2637.29	chr12	+	2679	13	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	13278	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1004077.6448941696	NA	2	NA	TRUE	NA	NA	NA	B	coding	321	966	350	1315	15.0	1	True	AGTAAA	-16
PB.2637.20	chr12	+	1709	13	full-splice_match	PCBP2	ENST00000437231.5	3026	13	3	1314	3	-3	multi-exon	FALSE	canonical	1	457962	junction_3	903192.968343175	NA	2	1	TRUE	NA	NA	NA	C	coding	318	957	348	1304	5.0	3	True	AATAGA	-33
PB.2637.21	chr12	+	1829	15	full-splice_match	PCBP2	ENST00000546463.5	1457	15	-223	-149	0	0	multi-exon	FALSE	canonical	1	457962	junction_3	1863319.2450316974	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	351	1439	15.0	0	True	AATAGA	-18
PB.2637.22	chr12	+	1816	15	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10361	12303	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	2058894.382849198	NA	1	NA	TRUE	NA	NA	NA	B	coding	366	1101	327	1427	15.0	0	True	AATAGA	-17
PB.2637.23	chr12	+	3299	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12319	intron_retention	FALSE	non_canonical	0	0	junction_7	1732964.7849154994	NA	4	1	TRUE	NA	NA	NA	B	coding	305	918	350	1267	5.0	1	True	AATAGA	-33
PB.2637.24	chr12	+	2977	12	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12090	intron_retention	FALSE	non_canonical	0	0	junction_7	1004078.10276594	NA	1	NA	TRUE	NA	NA	NA	B	coding	274	825	350	1174	15.0	1	True	ATTAAA	-20
PB.2637.25	chr12	+	3053	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12085	intron_retention	FALSE	canonical	1	457962	junction_3	1612313.3238489623	NA	13	1	TRUE	NA	NA	NA	B	coding	301	906	350	1255	10.0	1	True	ATTAAA	-15
PB.2637.26	chr12	+	2959	12	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12084	intron_retention	FALSE	canonical	1	457962	junction_3	877338.9516982072	NA	12	1	TRUE	NA	NA	NA	B	coding	270	813	350	1162	10.0	1	True	ATTAAA	-14
PB.2637.27	chr12	+	2776	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	13279	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	1726767.0855152595	NA	4	NA	TRUE	NA	NA	NA	B	coding	353	1062	350	1411	15.0	1	True	AGTAAA	-17
PB.8739.4	chr4	-	1937	8	novel_not_in_catalog	TMEM156	novel	1935	7	NA	NA	16	-78	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	28400.81770308879	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	399	1079	100.0	-1	True	NA	NA
PB.4128.1	chr16	+	1179	6	novel_in_catalog	NME4	novel	1232	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	54540	junction_1	1250059.0539935303	NA	2	1	TRUE	NA	NA	NA	B	coding	117	354	413	766	20.0	0	True	AGTAAA	-22
PB.3434.1	chr14	+	3368	7	novel_in_catalog	RTRAF	novel	7075	8	NA	NA	4	-2	intron_retention	FALSE	canonical	1	600352	junction_3	502850.53466269234	NA	4	NA	TRUE	NA	NA	NA	C	coding	183	552	123	674	20.0	-28	True	AATAAA	-21
PB.8739.7	chr4	-	1665	7	full-splice_match	TMEM156	ENST00000381938.3	1935	7	32	238	18	-238	multi-exon	FALSE	canonical	1	37538	junction_4	18384.943855110232	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	77	967	60.0	1	True	NA	NA
PB.6263.2	chr19	-	2077	2	full-splice_match	ZNF256	ENST00000598928.1	1958	2	-33	-86	-33	-5	multi-exon	FALSE	canonical	1	12257	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	567	1991	35.0	-3	True	AATAAA	-16
PB.8739.1	chr4	-	2604	7	full-splice_match	TMEM156	ENST00000381938.3	1935	7	56	-725	42	725	multi-exon	FALSE	canonical	1	37538	junction_4	18384.943855110232	NA	4	NA	TRUE	NA	NA	NA	C	coding	296	891	53	943	20.0	25	True	NA	NA
PB.8739.2	chr4	-	2021	9	novel_not_in_catalog	TMEM156	novel	1935	7	NA	NA	-13	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	34248.83572085882	NA	9	3	TRUE	NA	NA	NA	C	coding	328	987	122	1108	25.0	4	True	AATAAA	-37
PB.6263.1	chr19	-	2207	3	full-splice_match	ZNF256	ENST00000282308.3	2172	3	-40	5	-36	-5	multi-exon	FALSE	canonical	1	29693	junction_2	10312.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	238	2121	35.0	-6	True	AATAAA	-16
PB.3569.1	chr14	+	2147	1	antisense	novelGene_ACYP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-9686	False	NA	NA
PB.8718.12	chr4	-	3891	10	incomplete-splice_match	DHX15	ENST00000336812.4	2994	14	-10	10695	-10	1539	3prime_fragment	FALSE	canonical	1	1040316	junction_2	196478.1496269738	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1953	168	2120	25.0	-31	True	AAAAAG	-3
PB.8739.8	chr4	-	1739	6	novel_not_in_catalog	TMEM156	novel	1935	7	NA	NA	30	13400	any annotated donor/acceptor	FALSE	canonical	1	2104	junction_1	30877.499137073908	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	65	937	75.0	13	True	NA	NA
PB.8739.9	chr4	-	3776	2	novel_not_in_catalog	TMEM156	novel	1935	7	NA	NA	-14	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	99	300	2212	2511	35.0	3	True	AATAAA	-16
PB.7684.26	chr22	+	2342	17	full-splice_match	EWSR1	ENST00000406548.5	2207	17	43	-178	0	-8	multi-exon	FALSE	canonical	1	152248	junction_4	705107.5674304257	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	22	1989	30.0	-4064	False	AATAAA	-14
PB.11547.5	chr9	-	3309	3	incomplete-splice_match	FBXO10	ENST00000276960.7	3654	9	-27	20372	-1	6190	3prime_fragment	FALSE	canonical	1	27151	junction_2	30379.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	147	1577	95.0	-1	True	NA	NA
PB.635.1	chr1	-	3987	19	full-splice_match	CSDE1	ENST00000339438.10	4006	19	6	13	-3	-9	multi-exon	FALSE	canonical	1	1441617	junction_1	1263348.642629662	NA	15	NA	TRUE	NA	NA	NA	C	coding	767	2304	441	2744	30.0	5	True	AATAAA	-15
PB.11658.4	chr9	+	3412	9	novel_not_in_catalog	PHF2	novel	5569	22	NA	NA	86743	-2	any annotated donor/acceptor	FALSE	canonical	1	165616	junction_1	62155.51019406385	NA	1	NA	TRUE	NA	NA	NA	B	coding	482	1449	55	1503	20.0	NA	False	AGTAAA	-22
PB.11306.2	chr8	+	3684	3	full-splice_match	UTP23	ENST00000309822.6	3699	3	11	4	5	-4	multi-exon	FALSE	canonical	1	229256	junction_2	6155.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	249	750	91	840	15.0	-10	True	ATTAAA	-19
PB.11306.1	chr8	+	2906	3	full-splice_match	UTP23	ENST00000309822.6	3699	3	21	772	15	-772	multi-exon	FALSE	canonical	1	229256	junction_2	6155.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	750	81	830	10.0	0	True	AGTAAA	-43
PB.6499.3	chr2	+	4003	7	novel_in_catalog	MDH1	novel	893	4	NA	NA	0	-5	intron_retention	FALSE	canonical	1	2898971	junction_3	515807.0682524835	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	2986	3801	45.0	0	True	AATAAA	-10
PB.9401.15	chr5	-	2996	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	260	501	123	-501	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	122	796	30.0	259	False	NA	NA
PB.6499.1	chr2	+	1277	9	full-splice_match	MDH1	ENST00000233114.12	1650	9	370	3	0	0	multi-exon	FALSE	canonical	1	2570999	junction_3	526458.7533523964	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	66	1070	30.0	16	True	AATAAA	-15
PB.8919.9	chr4	-	2197	12	full-splice_match	PAPSS1	ENST00000265174.4	2731	12	212	322	-14	-322	multi-exon	FALSE	canonical	1	405415	junction_11	126763.2118638905	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	62	1936	15.0	-7	True	AATACA	-27
PB.6499.5	chr2	+	1548	9	full-splice_match	MDH1	ENST00000539945.5	1443	9	-108	3	45	-3	multi-exon	FALSE	canonical	1	27215	junction_1	1201206.7368119275	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	286	1344	35.0	-145	False	AATAAA	-12
PB.9401.14	chr5	-	3153	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	191	413	54	-413	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	191	865	50.0	27	True	AATAAA	-7
PB.6700.10	chr2	+	3931	15	novel_in_catalog	PSD4	novel	5188	17	NA	NA	-89	-5	combination_of_known_junctions	FALSE	canonical	1	143657	junction_11	71063.35443354007	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	594	2114	20.0	-903	False	NA	NA
PB.7319.1	chr20	+	2797	2	full-splice_match	ZSWIM3	ENST00000255152.2	2773	2	-26	2	-26	-2	multi-exon	FALSE	canonical	1	38437	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	696	2091	236	2326	35.0	-27	False	AATAAA	-5
PB.9234.2	chr5	-	5255	13	novel_not_in_catalog	MIER3	novel	5210	13	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1110	junction_11	62632.90907719537	NA	0	NA	TRUE	NA	NA	NA	B	coding	523	1572	159	1730	10.0	0	True	AATAAA	-16
PB.9401.17	chr5	-	2799	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	107	851	-30	-851	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	275	949	25.0	4	True	ATTAAA	-18
PB.6832.2	chr2	+	3376	4	full-splice_match	CYBRD1	ENST00000321348.8	4365	4	9	980	9	-493	multi-exon	FALSE	canonical	1	549304	junction_1	46583.50414041434	NA	3	NA	TRUE	NA	NA	NA	C	coding	286	861	190	1050	30.0	-149	False	TATAAA	-11
PB.6832.3	chr2	+	4007	3	full-splice_match	CYBRD1	ENST00000375252.3	3540	3	19	-486	-14	-1	multi-exon	FALSE	canonical	1	31960	junction_1	307921.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	307	702	15.0	-10	False	AATAAA	-17
PB.9094.24	chr4	-	3535	21	full-splice_match	ACSL1	ENST00000281455.6	3832	21	126	171	66	-171	multi-exon	FALSE	canonical	1	449852	junction_20	233090.99116149364	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	86	2182	25.0	-1	True	ACTAAA	-23
PB.3430.4	chr14	-	3807	7	full-splice_match	TRIM9	ENST00000360392.4	3726	7	-83	2	-83	-2	multi-exon	FALSE	canonical	1	68667	junction_6	7057.019570769392	NA	2	NA	TRUE	NA	NA	NA	C	coding	550	1653	221	1873	15.0	934	False	AATAAA	-24
PB.2092.1	chr11	+	2155	6	novel_in_catalog	CCS	novel	1430	8	NA	NA	-1	1	intron_retention	FALSE	canonical	1	399215	junction_2	99507.97393777044	NA	0	NA	TRUE	NA	NA	NA	C	coding	85	258	111	368	5.0	-6485	False	AATGAA	-20
PB.2092.2	chr11	+	1093	8	full-splice_match	CCS	ENST00000533244.5	1430	8	336	1	4	1	multi-exon	FALSE	canonical	1	272609	junction_3	127581.75191441378	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	106	930	5.0	-6480	False	AATGAA	-20
PB.2092.3	chr11	+	2303	6	novel_in_catalog	CCS	novel	1430	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	34836	junction_3	230048.72847933762	NA	0	NA	TRUE	NA	NA	NA	C	coding	85	258	75	332	5.0	3	True	AATGAA	-19
PB.3430.3	chr14	-	3467	10	full-splice_match	TRIM9	ENST00000298355.7	5284	10	954	863	-31	-863	multi-exon	FALSE	canonical	1	48953	junction_3	17242.755612462617	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	169	2301	65.0	-3	True	NA	NA
PB.3442.1	chr14	-	3505	1	incomplete-splice_match	DDHD1	ENST00000612692.4	12339	14	112822	27	12810	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	108	327	444	770	70.0	9379	False	NA	NA
PB.1928.2	chr11	+	5687	33	novel_not_in_catalog	MADD	novel	437	3	NA	NA	-8	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	111738.85768037385	NA	1	1	TRUE	NA	NA	NA	C	coding	1117	3354	176	3529	5.0	-7	True	NA	NA
PB.9401.10	chr5	-	3351	2	novel_in_catalog	TMED7-TICAM2	novel	3491	4	NA	NA	0	-32682	no_combination_of_known_junctions	FALSE	canonical	1	574	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	142	429	223	651	35.0	-5	True	AATAAA	-13
PB.11562.8	chr9	+	1169	7	novel_not_in_catalog	FRG1HP	novel	593	4	NA	NA	1	5135	any annotated donor/acceptor	FALSE	canonical	1	320	junction_1	20804.733072602066	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-11
PB.9401.13	chr5	-	3226	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	241	290	104	-290	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	141	815	25.0	240	False	AATAAA	-17
PB.6967.5	chr2	-	3523	20	novel_not_in_catalog	NDUFS1	novel	11819	19	NA	NA	-16	1138	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	265234.1128849721	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	106	2289	15.0	-17	True	TATAAA	-45
PB.11825.6	chr9	+	7794	55	novel_in_catalog	SPTAN1	novel	7889	56	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	176748	junction_49	422778.67263189185	NA	8	NA	TRUE	NA	NA	NA	C	coding	2451	7356	114	7469	20.0	0	True	AATAAA	-15
PB.777.10	chr1	+	3890	27	full-splice_match	UBAP2L	ENST00000428931.5	3988	27	98	0	0	0	multi-exon	FALSE	canonical	1	205789	junction_1	355796.0212221801	NA	2	NA	TRUE	NA	NA	NA	C	coding	1086	3261	73	3333	10.0	-11	True	TATAAA	-19
PB.1847.3	chr11	+	3633	6	novel_in_catalog	LDHA	novel	2416	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1888174	junction_2	2592382.6523859166	NA	3	NA	TRUE	NA	NA	NA	C	coding	129	390	2679	3068	25.0	-3	True	AATAAA	-13
PB.1847.2	chr11	+	2863	8	novel_in_catalog	LDHA	novel	2416	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	14787	junction_3	2830744.9444942353	NA	3	NA	TRUE	NA	NA	NA	C	coding	159	480	1819	2298	25.0	-4	True	AATAAA	-13
PB.1847.1	chr11	+	1644	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	203	569	5	9	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	71	1069	40.0	-5	True	AATAAA	-23
PB.1847.7	chr11	+	2343	7	novel_in_catalog	LDHA	novel	2416	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1888174	junction_2	2370814.6541704056	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	100	723	25.0	-1	True	AATAAA	-13
PB.1847.6	chr11	+	2951	7	novel_in_catalog	LDHA	novel	2416	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1888174	junction_2	2496496.82561701	NA	3	NA	TRUE	NA	NA	NA	C	coding	159	480	1907	2386	25.0	-1	True	AATAAA	-13
PB.1847.5	chr11	+	1214	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	174	1028	0	116	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	100	1098	45.0	-1	True	ATTAAA	-21
PB.1847.4	chr11	+	1532	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	174	710	0	-25	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	100	1098	30.0	-1	True	TATAAA	-33
PB.5637.1	chr19	-	3170	21	full-splice_match	SAFB2	ENST00000252542.8	3371	21	141	60	-63	51	multi-exon	FALSE	canonical	1	165334	junction_1	142060.09202160718	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	125	2986	35.0	-64	False	AATAAA	-24
PB.1847.9	chr11	+	1898	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	174	344	0	-137	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	100	1098	40.0	-1	True	NA	NA
PB.1847.8	chr11	+	2251	8	full-splice_match	LDHA	ENST00000422447.7	2416	8	174	-9	0	9	multi-exon	FALSE	canonical	1	1888174	junction_2	2325716.849732844	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	100	1098	45.0	-1	True	AATACA	-23
PB.5637.4	chr19	-	3488	20	novel_in_catalog	SAFB2	novel	3371	21	NA	NA	-19	1	intron_retention	FALSE	canonical	1	324863	junction_14	124805.45604849847	NA	1	NA	TRUE	NA	NA	NA	C	coding	902	2709	81	2789	10.0	-20	True	AATAAA	-16
PB.5637.5	chr19	-	4466	19	novel_in_catalog	SAFB2	novel	3371	21	NA	NA	-3	-44	intron_retention	FALSE	canonical	1	165334	junction_1	140958.50650295356	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	2767	4266	25.0	-4	True	AATAAA	-40
PB.5637.6	chr19	-	2564	11	novel_in_catalog	SAFB2	novel	3371	21	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	354841	junction_7	133716.93093879323	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	66	734	60.0	-5	True	AATAGA	-31
PB.5637.7	chr19	-	1683	12	incomplete-splice_match	SAFB2	ENST00000252542.8	3371	21	172	13231	-32	-4	3prime_fragment	FALSE	canonical	1	324863	junction_6	139315.09784402137	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1590	94	1683	60.0	-33	False	AATAGA	-31
PB.259.8	chr1	-	2666	11	full-splice_match	BSDC1	ENST00000455895.6	2846	11	7	173	0	-105	multi-exon	FALSE	canonical	1	165342	junction_10	145162.07073202697	NA	13	NA	TRUE	NA	NA	NA	C	coding	430	1293	28	1320	30.0	-14	True	TTTAAA	-5
PB.259.9	chr1	-	2627	11	novel_in_catalog	BSDC1	novel	2846	11	NA	NA	0	-73	combination_of_known_junctions	FALSE	canonical	1	18584	junction_8	205787.89849709335	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	269	1249	85.0	-1	True	TTTAAA	-37
PB.6967.4	chr2	-	3963	20	novel_not_in_catalog	NDUFS1	novel	11819	19	NA	NA	-8	1138	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	265234.1128849721	NA	3	2	TRUE	NA	NA	NA	C	coding	727	2184	182	2365	15.0	1	True	TATAAA	-45
PB.259.2	chr1	-	2643	11	novel_not_in_catalog	BSDC1	novel	2846	11	NA	NA	-4	-4	any annotated donor/acceptor	FALSE	canonical	1	9644	junction_2	206011.1998664393	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	22	1128	15.0	-8	True	ATTAAA	-18
PB.8237.5	chr3	-	7521	29	novel_not_in_catalog	ROBO1	novel	7492	28	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	74891.1202252688	NA	1	1	TRUE	NA	NA	NA	B	coding	843	2532	3323	5854	25.0	-13	True	ATTAAA	-10
PB.259.1	chr1	-	2805	11	full-splice_match	BSDC1	ENST00000446293.6	1505	11	-11	-1289	0	-17	multi-exon	FALSE	canonical	1	60638	junction_8	197045.159267844	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	28	1371	85.0	-14	True	NA	NA
PB.259.6	chr1	-	2845	12	full-splice_match	BSDC1	ENST00000444377.5	2925	12	1	79	-1	-21	multi-exon	FALSE	canonical	1	8489	junction_3	233175.77330849905	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	14	1300	80.0	0	True	NA	NA
PB.259.7	chr1	-	2752	11	full-splice_match	BSDC1	ENST00000446293.6	1505	11	-14	-1233	-3	-73	multi-exon	FALSE	canonical	1	60638	junction_8	197045.159267844	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	31	1374	85.0	-17	True	TTTAAA	-37
PB.259.4	chr1	-	2696	11	novel_in_catalog	BSDC1	novel	2846	11	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	1	18584	junction_8	205787.89849709335	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	282	1262	85.0	-14	True	NA	NA
PB.817.19	chr1	+	2304	11	novel_in_catalog	LMNA	novel	570	4	NA	NA	0	-8	intron_retention	FALSE	canonical	1	15	junction_2	4270230.995037392	NA	14	3	TRUE	NA	NA	NA	C	coding	300	903	207	1109	80.0	2	True	NA	NA
PB.7915.1	chr3	-	3060	2	incomplete-splice_match	THUMPD3-AS1	ENST00000469846.2	670	3	1922	-2468	1023	5	5prime_fragment	FALSE	canonical	1	42545	junction_1	0.0	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	3214	False	NA	NA
PB.9519.1	chr5	+	3204	1	full-splice_match	PCDHB18P	ENST00000526308.2	3197	1	-8	1	-8	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	734	2205	390	2594	25.0	-67	False	AATAAA	-27
PB.7915.2	chr3	-	2070	3	incomplete-splice_match	THUMPD3-AS1	ENST00000521609.5	793	5	-11	3049	0	5	3prime_fragment	FALSE	canonical	1	30310	junction_1	5327.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.7915.5	chr3	-	2470	2	full-splice_match	THUMPD3-AS1	ENST00000518437.1	240	2	57	-2287	0	-13	multi-exon	FALSE	canonical	1	40964	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.7915.4	chr3	-	2694	2	full-splice_match	THUMPD3-AS1	ENST00000518437.1	240	2	57	-2511	0	211	multi-exon	FALSE	canonical	1	40964	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	NA	NA
PB.7915.7	chr3	-	5673	1	novel_in_catalog	THUMPD3-AS1	novel	1115	5	NA	NA	71	23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1835	False	NA	NA
PB.7915.6	chr3	-	1884	2	incomplete-splice_match	THUMPD3-AS1	ENST00000469846.2	670	3	1922	-1292	1023	68	5prime_fragment	FALSE	canonical	1	42545	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	3214	False	NA	NA
PB.6485.4	chr2	+	1737	4	full-splice_match	PEX13	ENST00000295030.5	4470	4	-2	2735	0	-2735	multi-exon	FALSE	canonical	1	148551	junction_1	74350.02594634533	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	41	1252	20.0	0	True	AATAAA	-17
PB.6485.5	chr2	+	2091	4	full-splice_match	PEX13	ENST00000295030.5	4470	4	0	2379	0	-2379	multi-exon	FALSE	canonical	1	148551	junction_1	74350.02594634533	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	39	1250	60.0	2	True	NA	NA
PB.6485.6	chr2	+	2889	5	novel_not_in_catalog	PEX13	novel	1533	2	NA	NA	4	-3068	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	150273.7082249836	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	1643	2737	10.0	6	True	ATTAAA	-13
PB.6485.7	chr2	+	2251	4	full-splice_match	PEX13	ENST00000295030.5	4470	4	4	2215	4	-2215	multi-exon	FALSE	canonical	1	148551	junction_1	74350.02594634533	NA	8	NA	TRUE	NA	NA	NA	C	coding	403	1212	35	1246	60.0	6	True	NA	NA
PB.1483.5	chr10	+	6841	6	novel_in_catalog	SAMD8	novel	919	4	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	29812	junction_1	71503.43349350434	NA	2	NA	TRUE	NA	NA	NA	C	coding	415	1248	164	1411	35.0	-70	False	AATAAA	-16
PB.6485.2	chr2	+	2941	5	novel_not_in_catalog	PEX13	novel	1533	2	NA	NA	-2	-124	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	126512.43351421037	NA	5	1	TRUE	NA	NA	NA	C	coding	403	1212	43	1254	10.0	-2	True	NA	NA
PB.6485.3	chr2	+	3231	5	novel_not_in_catalog	PEX13	novel	1533	2	NA	NA	0	-2732	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	150273.7082249836	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	1649	2743	20.0	0	True	AATAAA	-20
PB.6967.7	chr2	-	3361	19	full-splice_match	NDUFS1	ENST00000233190.10	11819	19	125	8333	31	-39	multi-exon	FALSE	canonical	1	480962	junction_18	196264.18197030303	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	143	2326	65.0	40	False	AAAACA	-27
PB.6706.8	chr2	+	1845	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	132	4741	-1	264	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	189	1445	70.0	-39	True	NA	NA
PB.6706.9	chr2	+	5417	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	130	1171	-3	-1171	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	191	1447	75.0	-41	True	NA	NA
PB.817.15	chr1	+	2509	13	novel_in_catalog	LMNA	novel	570	4	NA	NA	0	-10	intron_retention	FALSE	canonical	1	4137	junction_12	3520666.7946676696	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	209	2269	5.0	0	True	AATACA	-12
PB.6706.4	chr2	+	5543	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	129	1046	-4	-1046	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	192	1448	40.0	-42	True	ATTAAA	-17
PB.6706.5	chr2	+	2405	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	115	4198	12	-191	multi-exon	TRUE	canonical	1	1514484	junction_5	436518.388896497	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	206	1462	25.0	-56	True	AATACA	-17
PB.6706.6	chr2	+	2261	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	116	4341	13	-334	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	205	1461	20.0	-55	True	AATAAA	-18
PB.6706.7	chr2	+	3921	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	129	2668	-4	1339	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	192	1448	20.0	-42	True	AATATA	-23
PB.817.16	chr1	+	2238	12	full-splice_match	LMNA	ENST00000368299.7	2253	12	-11	26	0	-12	multi-exon	FALSE	canonical	1	3486694	junction_1	2621856.252787963	NA	1	NA	TRUE	NA	NA	NA	C	coding	614	1845	209	2053	80.0	0	True	NA	NA
PB.6706.2	chr2	+	3374	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	137	3207	-1	800	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	184	1440	25.0	-34	True	AATAAA	-20
PB.6706.3	chr2	+	2461	12	full-splice_match	ACTR3	ENST00000263238.6	6718	12	256	4001	118	6	multi-exon	FALSE	canonical	1	1514484	junction_5	436518.388896497	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	65	1321	20.0	-1	True	AATAAA	-21
PB.5805.1	chr19	-	2860	7	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	55879	-70772	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	149305.2464204345	NA	0	NA	TRUE	NA	NA	NA	B	coding	266	801	394	1194	35.0	4967	False	AATAAA	-16
PB.5805.2	chr19	-	2954	7	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	55796	-72706	intron_retention	FALSE	non_canonical	0	0	junction_6	149305.2464204345	NA	0	NA	TRUE	NA	NA	NA	B	coding	266	801	248	1048	100.0	-1	True	NA	NA
PB.5805.4	chr19	-	2368	7	novel_not_in_catalog	AC008764.1	novel	2567	12	NA	NA	55786	-73298	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	149305.2464204345	NA	2	NA	TRUE	NA	NA	NA	B	coding	266	801	254	1054	70.0	-11	True	NA	NA
PB.770.5	chr1	-	5499	28	novel_in_catalog	DENND4B	novel	2530	3	NA	NA	-60	-6	combination_of_known_junctions	FALSE	canonical	1	24098	junction_27	106492.28844297446	NA	2	NA	TRUE	NA	NA	NA	B	coding	1507	4524	186	4709	0.0	6773	False	AGTAAA	-14
PB.515.3	chr1	+	2115	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	217	4039	-102	877	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	108	1205	55.0	-55	True	AATAAA	-25
PB.817.10	chr1	+	2051	9	novel_not_in_catalog	LMNA	novel	570	4	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	2685389.1333712437	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	211	1683	0.0	-2	True	AATACA	-20
PB.817.11	chr1	+	2026	8	novel_not_in_catalog	LMNA	novel	570	4	NA	NA	2	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	2564078.2494065254	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	211	1449	5.0	-2	True	AATACA	-13
PB.6967.6	chr2	-	3805	19	full-splice_match	NDUFS1	ENST00000233190.10	11819	19	162	7852	-16	442	multi-exon	FALSE	canonical	1	480962	junction_18	196264.18197030303	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	106	2289	15.0	-17	True	ACTAAA	-15
PB.1857.8	chr11	+	2362	15	full-splice_match	PRMT3	ENST00000330796.9	2530	15	160	8	2	4	multi-exon	FALSE	canonical	1	11481	junction_1	63956.91444564976	NA	2	NA	TRUE	NA	NA	NA	C	coding	454	1365	125	1489	55.0	2	True	AATAAA	-35
PB.1857.9	chr11	+	2743	15	novel_in_catalog	PRMT3	novel	2653	16	NA	NA	11	33	intron_retention	FALSE	canonical	1	122568	junction_2	40791.952158708555	NA	1	NA	TRUE	NA	NA	NA	C	coding	564	1695	135	1829	60.0	0	True	AATAAA	-8
PB.1857.4	chr11	+	2666	17	novel_not_in_catalog	PRMT3	novel	2653	16	NA	NA	3	-5	any annotated donor/acceptor	FALSE	canonical	1	203	junction_15	76448.81162081183	NA	2	NA	TRUE	NA	NA	NA	C	coding	565	1698	105	1802	55.0	0	True	AATAAA	-26
PB.1857.5	chr11	+	4373	16	full-splice_match	PRMT3	ENST00000331079.10	2653	16	188	-1908	2	1867	multi-exon	FALSE	canonical	1	122568	junction_3	43747.515346131375	NA	3	NA	TRUE	NA	NA	NA	C	coding	531	1596	30	1625	35.0	2	True	GATAAA	-25
PB.1857.6	chr11	+	2442	16	full-splice_match	PRMT3	ENST00000331079.10	2653	16	186	25	0	-25	multi-exon	FALSE	canonical	1	122568	junction_3	43747.515346131375	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	32	1627	45.0	0	True	TATAAA	-21
PB.1857.7	chr11	+	2300	15	novel_not_in_catalog	PRMT3	novel	2653	16	NA	NA	0	-12	any annotated donor/acceptor	FALSE	canonical	1	290	junction_2	79214.35949371806	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	163	1443	55.0	0	True	AATAAA	-19
PB.609.2	chr1	+	2329	10	novel_not_in_catalog	CEPT1	novel	1957	9	NA	NA	113	0	intron_retention	FALSE	canonical	1	16723	junction_1	159748.98528729685	NA	0	NA	TRUE	NA	NA	NA	C	coding	194	585	953	1537	10.0	-2	True	AATAAA	-21
PB.1857.1	chr11	+	2509	16	full-splice_match	PRMT3	ENST00000331079.10	2653	16	168	-24	-18	-5	multi-exon	FALSE	canonical	1	122568	junction_3	43747.515346131375	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	50	1645	55.0	-18	True	AATAAA	-26
PB.1857.2	chr11	+	2200	16	full-splice_match	PRMT3	ENST00000331079.10	2653	16	118	335	8	210	multi-exon	FALSE	canonical	1	122568	junction_3	43747.515346131375	NA	1	NA	TRUE	NA	NA	NA	C	coding	531	1596	100	1695	35.0	5	True	AATAAA	-28
PB.1857.3	chr11	+	2426	14	novel_in_catalog	PRMT3	novel	2653	16	NA	NA	-3	4	no_combination_of_known_junctions	FALSE	canonical	1	3173	junction_3	67498.56578927783	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	111	1553	55.0	-6	True	AATAAA	-35
PB.11503.1	chr9	+	3395	16	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	-101	-232	any annotated donor/acceptor	FALSE	canonical	1	78	junction_1	96437.26221608187	NA	1	NA	TRUE	NA	NA	NA	C	coding	826	2481	164	2644	85.0	-4621	False	NA	NA
PB.11503.2	chr9	+	3613	24	full-splice_match	NFX1	ENST00000379540.7	4604	24	11	980	10	-980	multi-exon	FALSE	canonical	1	141865	junction_19	74443.81330701687	NA	0	NA	TRUE	NA	NA	NA	C	coding	1120	3363	52	3414	20.0	-5	True	TATAAA	-19
PB.11503.4	chr9	+	4629	24	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	-79	-1	any annotated donor/acceptor	FALSE	canonical	1	2667	junction_15	95929.93480010482	NA	8	1	TRUE	NA	NA	NA	C	coding	831	2496	142	2637	10.0	-4599	False	ATTAAA	-18
PB.11503.5	chr9	+	3953	21	full-splice_match	NFX1	ENST00000379521.8	3609	21	-19	-325	-18	325	multi-exon	FALSE	canonical	1	141865	junction_19	76147.62194717575	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3075	81	3155	80.0	-4538	False	NA	NA
PB.515.2	chr1	+	1298	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	208	4865	-111	51	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	117	1214	35.0	-64	True	AATAAA	-19
PB.11503.7	chr9	+	2320	15	novel_not_in_catalog	NFX1	novel	4604	24	NA	NA	-10	-232	any annotated donor/acceptor	FALSE	canonical	1	4031	junction_1	111579.97497852912	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	73	1569	85.0	-26	True	NA	NA
PB.11503.8	chr9	+	4462	22	novel_in_catalog	NFX1	novel	4604	24	NA	NA	-3	-1	no_combination_of_known_junctions	FALSE	canonical	1	2572	junction_17	89250.72535309962	NA	0	NA	TRUE	NA	NA	NA	C	coding	1072	3219	66	3284	10.0	-19	True	ATTAAA	-18
PB.11503.9	chr9	+	3177	16	full-splice_match	NFX1	ENST00000318524.6	3513	16	-35	371	-1	-371	multi-exon	FALSE	canonical	1	161496	junction_15	63844.51143151531	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	64	2565	75.0	-17	True	NA	NA
PB.11392.1	chr8	+	1826	6	full-splice_match	CYC1	ENST00000533444.1	1832	6	5	1	5	-1	multi-exon	FALSE	canonical	1	2468296	junction_1	518215.2322351785	NA	0	NA	TRUE	NA	NA	NA	A	coding	266	801	838	1638	35.0	1	True	AATAAA	-17
PB.10838.1	chr7	-	1905	10	full-splice_match	ZC3HC1	ENST00000358303.8	1972	10	66	1	0	0	multi-exon	FALSE	canonical	1	146224	junction_8	45125.92502495683	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	20	1528	20.0	-12	True	AATAAA	-19
PB.1960.19	chr11	-	3007	19	novel_not_in_catalog	PATL1	novel	4072	19	NA	NA	-54	-1006	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	129839.19593824082	NA	1	1	TRUE	NA	NA	NA	C	coding	658	1977	140	2116	55.0	-19	True	AATAAA	-18
PB.1960.18	chr11	-	3027	18	novel_in_catalog	PATL1	novel	4072	19	NA	NA	-47	-1002	no_combination_of_known_junctions	FALSE	canonical	1	87854	junction_12	121946.55975541062	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	133	2355	40.0	-12	True	AATAAA	-22
PB.1301.1	chr10	-	1541	9	full-splice_match	PHYH	ENST00000263038.8	1577	9	38	-2	-11	-2	multi-exon	FALSE	canonical	1	157633	junction_7	126849.65088639385	NA	0	NA	TRUE	NA	NA	NA	A	coding	338	1017	22	1038	15.0	-1	True	AATAAA	-21
PB.1960.13	chr11	-	4370	20	novel_not_in_catalog	PATL1	novel	4072	19	NA	NA	-60	-48	any annotated donor/acceptor	FALSE	canonical	1	548	junction_5	139345.16062823893	NA	2	1	TRUE	NA	NA	NA	C	coding	581	1746	146	1891	25.0	-25	True	AATAAA	-14
PB.7901.3	chr3	+	7718	27	novel_in_catalog	CHL1	novel	8023	28	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	19904	junction_1	23552.997307626832	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	502	4017	30.0	-1275	False	AATAAA	-21
PB.2807.4	chr12	+	3880	12	full-splice_match	PLXNC1	ENST00000545312.1	1813	12	9	-2076	9	-1	multi-exon	FALSE	canonical	1	3473	junction_1	40132.52250887825	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	568	1491	5.0	-95	False	AATAAA	-18
PB.2807.5	chr12	+	3804	11	novel_in_catalog	PLXNC1	novel	7346	31	NA	NA	54	0	no_combination_of_known_junctions	FALSE	canonical	1	3453	junction_5	54070.418128954756	NA	2	NA	TRUE	NA	NA	NA	C	coding	220	663	752	1414	5.0	-50	False	AATAAA	-19
PB.1960.17	chr11	-	3251	19	full-splice_match	PATL1	ENST00000300146.9	4072	19	-185	1006	-185	-1006	multi-exon	FALSE	canonical	1	97743	junction_12	118268.75779239491	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	271	2583	55.0	-22	True	AATAAA	-18
PB.1960.16	chr11	-	3182	20	novel_not_in_catalog	PATL1	novel	4072	19	NA	NA	-41	-1005	any annotated donor/acceptor	FALSE	canonical	1	32889	junction_15	130570.74936392554	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	858	2513	50.0	-6	True	AATAAA	-19
PB.1960.15	chr11	-	3755	19	full-splice_match	PATL1	ENST00000300146.9	4072	19	-108	425	-108	-425	multi-exon	FALSE	canonical	1	97743	junction_12	118268.75779239491	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	194	2506	5.0	440	False	ATTAAA	-22
PB.2807.1	chr12	+	5736	28	novel_not_in_catalog	PLXNC1	novel	7346	31	NA	NA	-21374	-2	any annotated donor/acceptor	FALSE	canonical	1	1852	junction_1	31951.266261264464	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3141	208	3348	5.0	18	True	AATAAA	-17
PB.10861.14	chr7	-	2325	4	full-splice_match	CYREN	ENST00000424142.5	1738	4	-57	-530	20	527	multi-exon	FALSE	canonical	1	170583	junction_3	118571.87564323825	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	661	969	25.0	-12	True	ATTAAA	-18
PB.10861.15	chr7	-	1588	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	452	760	20.0	1706	False	AATACA	-36
PB.10861.16	chr7	-	2481	3	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	234840	junction_2	101579.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	102	309	1345	1653	20.0	-8	True	AATACA	-36
PB.10861.17	chr7	-	1787	4	full-splice_match	CYREN	ENST00000424142.5	1738	4	-49	0	-15	0	multi-exon	FALSE	canonical	1	170583	junction_3	118571.87564323825	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	653	961	20.0	-4	True	AATACA	-34
PB.10861.10	chr7	-	4183	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-10	2608	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	438	746	45.0	1720	False	NA	NA
PB.10861.11	chr7	-	4237	4	full-splice_match	CYREN	ENST00000424142.5	1738	4	-62	-2437	15	2434	multi-exon	FALSE	canonical	1	170583	junction_3	118571.87564323825	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	666	974	80.0	-17	True	NA	NA
PB.10861.12	chr7	-	4012	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-13	2434	combination_of_known_junctions	FALSE	canonical	1	234840	junction_3	88586.32481872634	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	441	749	80.0	1717	False	NA	NA
PB.10861.13	chr7	-	4004	4	full-splice_match	CYREN	ENST00000393114.7	1482	4	-85	-2437	15	2434	multi-exon	FALSE	canonical	1	71194	junction_2	150036.42546469247	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	268	741	80.0	-2	True	NA	NA
PB.10861.18	chr7	-	1603	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	1	59787	junction_2	158755.61105114434	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	468	776	20.0	1723	False	AATACA	-35
PB.10861.19	chr7	-	1564	4	full-splice_match	CYREN	ENST00000393114.7	1482	4	-82	0	18	0	multi-exon	FALSE	canonical	1	71194	junction_2	150036.42546469247	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	265	738	20.0	1	True	AATACA	-34
PB.11780.6	chr9	+	1618	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	-21	1850	-14	-981	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	167	1108	25.0	-2	True	GATAAA	-24
PB.5811.2	chr19	+	6166	18	novel_in_catalog	SIN3B	novel	5037	19	NA	NA	-9	0	intron_retention	FALSE	canonical	1	135379	junction_1	58108.75909830321	NA	1	NA	TRUE	NA	NA	NA	C	coding	720	2163	2381	4543	20.0	-7	True	ATTAAA	-21
PB.5811.3	chr19	+	2519	9	novel_not_in_catalog	SIN3B	novel	5037	19	NA	NA	-2	1359	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	107639.37592372969	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	24	1085	20.0	0	True	NA	NA
PB.5811.1	chr19	+	5049	19	full-splice_match	SIN3B	ENST00000248054.9	5037	19	-13	1	-13	-1	multi-exon	FALSE	canonical	1	135379	junction_1	62562.93373088759	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	35	3427	20.0	-11	False	ATTAAA	-20
PB.5811.6	chr19	+	5128	20	full-splice_match	SIN3B	ENST00000379803.5	5129	20	-6	7	1	-4	multi-exon	TRUE	canonical	1	17186	junction_10	91488.57902771085	NA	5	3	TRUE	NA	NA	NA	C	coding	1162	3489	21	3509	25.0	3	True	ATTAAA	-17
PB.5811.7	chr19	+	1727	8	full-splice_match	SIN3B	ENST00000596802.5	2556	8	5	824	5	-824	multi-exon	FALSE	canonical	1	135379	junction_1	66241.82560397123	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	10	1071	20.0	14	True	NA	NA
PB.5811.4	chr19	+	1866	8	full-splice_match	SIN3B	ENST00000596802.5	2556	8	-9	699	-2	-699	multi-exon	FALSE	canonical	1	135379	junction_1	66241.82560397123	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	24	1085	25.0	0	True	NA	NA
PB.5811.5	chr19	+	5830	19	novel_in_catalog	SIN3B	novel	5037	19	NA	NA	0	-3	intron_retention	FALSE	canonical	1	49410	junction_9	75930.46589861179	NA	13	1	TRUE	NA	NA	NA	C	coding	720	2163	2048	4210	25.0	2	True	ATTAAA	-18
PB.487.6	chr1	-	6749	20	full-splice_match	FUBP1	ENST00000370768.6	2378	20	-23	-4348	1	-2	multi-exon	FALSE	canonical	1	350512	junction_16	287852.49878737016	NA	3	NA	TRUE	NA	NA	NA	C	coding	644	1935	106	2040	25.0	0	True	AATAAA	-18
PB.11562.2	chr9	+	2404	1	novel_in_catalog	FRG1HP	novel	593	4	NA	NA	-2	-12885	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	NA	False	TATAAA	-44
PB.11780.2	chr9	+	9375	10	full-splice_match	NEK6	ENST00000320246.9	3447	10	-53	-5875	-46	5875	multi-exon	FALSE	canonical	1	180815	junction_1	177757.33012421426	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	199	1140	45.0	-4999	False	AATAAA	-18
PB.6569.8	chr2	+	3477	11	novel_not_in_catalog	TTC31	novel	4025	7	NA	NA	2	-2	intron_retention	FALSE	canonical	1	19468	junction_7	60550.35604362703	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	13	705	30.0	-3	True	NA	NA
PB.1036.1	chr1	+	1338	6	full-splice_match	TIMM17A	ENST00000367287.4	1659	6	15	306	0	4	multi-exon	FALSE	canonical	1	708416	junction_4	449012.19405597437	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	22	537	30.0	0	True	AATAAA	-27
PB.6389.6	chr2	+	2848	9	full-splice_match	PPP1CB	ENST00000358506.6	4771	9	29	1894	29	-612	multi-exon	FALSE	canonical	1	117987	junction_1	641166.1381704726	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	132	1115	30.0	-4	True	AGTAAA	-14
PB.232.4	chr1	+	5755	18	full-splice_match	EPB41	ENST00000647103.1	5772	18	9	8	-3	0	multi-exon	FALSE	canonical	1	224002	junction_1	206904.19095977666	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	729	2534	40.0	-3	True	AATAAA	-8
PB.11513.4	chr9	-	1474	4	full-splice_match	SIGMAR1	ENST00000277010.8	1656	4	180	2	92	-2	multi-exon	TRUE	canonical	1	772367	junction_3	129748.69901552856	NA	1	NA	TRUE	NA	NA	NA	C	coding	134	405	162	566	10.0	234	False	AATAAA	-18
PB.11513.3	chr9	-	1844	3	full-splice_match	SIGMAR1	ENST00000497006.1	610	3	-147	-1087	-21	-1	multi-exon	FALSE	canonical	1	772367	junction_2	153065.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	134	496	10.0	-5	True	AATAAA	-19
PB.11513.2	chr9	-	2955	2	novel_in_catalog	SIGMAR1	novel	1743	3	NA	NA	6	-1	intron_retention	FALSE	canonical	1	772367	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	107	469	10.0	22	False	AATAAA	-19
PB.11513.1	chr9	-	1605	3	full-splice_match	SIGMAR1	ENST00000477726.1	840	3	-5	-760	-5	-1	multi-exon	FALSE	canonical	1	21807	junction_1	375280.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	192	579	118	696	10.0	11	True	AATAAA	-19
PB.515.7	chr1	+	3875	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	260	2236	-59	-2228	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	65	1162	55.0	-12	True	TATAAA	-3
PB.11357.19	chr8	-	4193	29	novel_not_in_catalog	PTK2	novel	4955	32	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	164480.40490045652	NA	2	1	TRUE	NA	NA	NA	C	coding	795	2388	371	2758	30.0	787	False	ATTAAA	-15
PB.11562.1	chr9	+	3588	6	novel_not_in_catalog	FRG1HP	novel	593	4	NA	NA	-4	5135	any annotated donor/acceptor	FALSE	canonical	1	408	junction_1	20586.012286015957	NA	5	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-11
PB.8919.1	chr4	-	2646	12	novel_not_in_catalog	PAPSS1	novel	296	2	NA	NA	-2	3	any annotated donor/acceptor	FALSE	canonical	1	12611	junction_5	224133.69309137095	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	50	955	25.0	5	True	AATAAA	-24
PB.11662.1	chr9	+	3001	12	full-splice_match	MFSD14B	ENST00000375344.7	3420	12	296	123	296	0	multi-exon	FALSE	canonical	1	21128	junction_3	140599.10616364717	NA	4	1	TRUE	NA	NA	NA	C	coding	485	1458	37	1494	5.0	278	False	AATAAA	-19
PB.643.4	chr1	+	2387	7	incomplete-splice_match	PTGFRN	ENST00000393203.2	6178	9	108	15854	108	7	3prime_fragment	FALSE	canonical	1	115467	junction_2	53144.67063173461	NA	7	NA	TRUE	NA	NA	NA	C	coding	773	2322	40	2361	25.0	108	False	NA	NA
PB.6497.5	chr2	+	3946	23	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	6325	junction_1	107915.27697790031	NA	1	NA	TRUE	NA	NA	NA	C	coding	878	2637	326	2962	25.0	-32	True	AATAAA	-21
PB.6497.4	chr2	+	4186	24	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	26	-2	intron_retention	FALSE	canonical	1	24780	junction_13	94540.987161019	NA	5	1	TRUE	NA	NA	NA	C	coding	914	2745	457	3201	20.0	3	True	AATAAA	-22
PB.6497.7	chr2	+	4051	24	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	6325	junction_1	104980.15513266608	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2745	323	3067	25.0	-29	True	AATAAA	-21
PB.6497.6	chr2	+	5012	23	full-splice_match	EHBP1	ENST00000431489.5	5076	23	63	1	-61	-1	multi-exon	FALSE	canonical	1	131027	junction_15	83611.25974936648	NA	1	NA	TRUE	NA	NA	NA	C	coding	1160	3483	544	4026	15.0	-84	False	AATAAA	-23
PB.6497.1	chr2	+	3235	9	full-splice_match	EHBP1	ENST00000405482.5	1311	9	0	-1924	0	1924	multi-exon	FALSE	canonical	1	6325	junction_1	86539.60544419821	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	381	1382	75.0	-87	True	NA	NA
PB.6497.3	chr2	+	4926	24	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	29	-3	intron_retention	FALSE	canonical	1	6325	junction_1	93739.05280762294	NA	0	NA	TRUE	NA	NA	NA	C	coding	1196	3591	352	3942	25.0	-58	True	AATAAA	-21
PB.6497.2	chr2	+	5028	25	novel_not_in_catalog	EHBP1	novel	4108	23	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	95882.879086927	NA	1	1	TRUE	NA	NA	NA	C	coding	1196	3591	454	4044	25.0	-84	True	AATAAA	-21
PB.6338.41	chr2	-	4886	21	novel_not_in_catalog	PUM2	novel	6112	20	NA	NA	0	-196	any annotated donor/acceptor	FALSE	canonical	1	51244	junction_19	251324.51760870844	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	566	3361	35.0	-17	True	ATTAAA	-24
PB.8837.1	chr4	-	3548	1	intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	1	True	NA	NA
PB.6497.8	chr2	+	4012	24	novel_in_catalog	EHBP1	novel	4108	23	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	3979	junction_13	108078.20576088176	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	323	3028	25.0	-29	True	AATAAA	-21
PB.515.6	chr1	+	1918	9	full-splice_match	SH3GLB1	ENST00000370558.8	6371	9	237	4216	-82	700	multi-exon	FALSE	canonical	1	566913	junction_1	264338.7003443688	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	88	1185	30.0	-35	True	ATTAAA	-18
PB.8837.2	chr4	-	3176	1	intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	60.0	21	True	AATAAA	-22
PB.5520.7	chr18	-	6379	43	novel_not_in_catalog	RTTN	novel	3175	15	NA	NA	2371	-6	any annotated donor/acceptor	FALSE	canonical	1	590	junction_42	32437.46834538103	NA	3	1	TRUE	NA	NA	NA	C	coding	1871	5616	423	6038	50.0	-2141	False	AATAAA	-18
PB.5520.6	chr18	-	3902	24	novel_not_in_catalog	RTTN	novel	3175	15	NA	NA	6553	-6	any annotated donor/acceptor	FALSE	canonical	1	7520	junction_14	37537.58413993077	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	1729	3561	50.0	-112	False	AATAAA	-18
PB.10643.2	chr7	-	6150	17	novel_not_in_catalog	SEMA3D	novel	6265	17	NA	NA	15129	-6	any annotated donor/acceptor	FALSE	canonical	1	601	junction_16	11276.443129477653	NA	2	NA	TRUE	NA	NA	NA	B	coding	583	1752	518	2269	30.0	-1	True	AATAAA	-27
PB.10643.3	chr7	-	5959	19	novel_in_catalog	SEMA3D	novel	6265	17	NA	NA	29	-583	combination_of_known_junctions	FALSE	canonical	1	18330	junction_18	8502.893889548051	NA	9	NA	TRUE	NA	NA	NA	B	coding	777	2334	322	2655	30.0	11	True	ATTAAA	-16
PB.12082.1	chrX	-	7946	9	full-splice_match	SHROOM4	ENST00000376020.6	9556	9	-70	1680	-70	-962	multi-exon	FALSE	canonical	1	7587	junction_7	9303.732732081247	NA	1	NA	TRUE	NA	NA	NA	C	coding	1493	4482	97	4578	50.0	2	True	AATAAA	-14
PB.5520.2	chr18	-	7189	49	novel_not_in_catalog	RTTN	novel	3175	15	NA	NA	-33	-5	any annotated donor/acceptor	FALSE	canonical	1	981	junction_48	30873.46352822651	NA	1	NA	TRUE	NA	NA	NA	C	coding	2221	6666	182	6847	50.0	-118	False	AATAAA	-19
PB.5520.1	chr18	-	6293	43	novel_not_in_catalog	RTTN	novel	3175	15	NA	NA	2368	6	any annotated donor/acceptor	TRUE	canonical	1	1386	junction_42	32392.758907885564	NA	0	NA	TRUE	NA	NA	NA	C	coding	1871	5616	325	5940	35.0	10019	False	AATAAA	-30
PB.12082.2	chrX	-	3541	6	incomplete-splice_match	SHROOM4	ENST00000376020.6	9556	9	-103	16083	-103	-15365	3prime_fragment	FALSE	canonical	1	7587	junction_4	7709.271005743669	NA	0	NA	TRUE	NA	NA	NA	C	coding	1137	3411	130	3540	65.0	-31	True	NA	NA
PB.10371.5	chr7	-	3083	14	novel_not_in_catalog	BRAT1	novel	2915	14	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	26884	junction_1	130823.34768284578	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2646	250	2895	50.0	-3	True	ATTAAA	-21
PB.7784.1	chr22	-	1471	4	full-splice_match	DNAL4	ENST00000216068.8	1504	4	36	-3	-5	3	multi-exon	FALSE	canonical	1	113531	junction_3	44647.2249255825	NA	0	NA	TRUE	NA	NA	NA	A	coding	105	318	210	527	20.0	5	True	ATTAAA	-19
PB.6763.1	chr2	-	3109	5	intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	57	junction_4	1842.7170665894425	NA	4	1	FALSE	NA	NA	NA	A	coding	124	375	302	676	25.0	8954	False	AATAAA	-31
PB.5520.9	chr18	-	5258	37	novel_not_in_catalog	RTTN	novel	3175	15	NA	NA	-16355	-6	any annotated donor/acceptor	FALSE	canonical	1	865	junction_36	33796.9370911486	NA	1	1	TRUE	NA	NA	NA	C	coding	1605	4818	100	4917	50.0	9	True	AATAAA	-18
PB.2443.2	chr12	-	2339	11	full-splice_match	C1R	ENST00000542285.5	2660	11	38	283	-29	-11	multi-exon	FALSE	canonical	0	0	junction_2	633353.5622131212	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	182	2299	90.0	-2	True	NA	NA
PB.2443.3	chr12	-	2222	12	novel_not_in_catalog	C1R	novel	2508	11	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	656961.864756394	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	79	2109	35.0	-22	True	ATTAAA	-14
PB.2443.1	chr12	-	2508	11	full-splice_match	C1R	ENST00000647956.1	2508	11	-14	14	13	1	multi-exon	FALSE	canonical	0	0	junction_2	633353.5622131212	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	72	2189	50.0	-15	True	AATATA	-41
PB.3347.8	chr14	-	1938	3	novel_in_catalog	TM9SF1	novel	2452	6	NA	NA	-26	-94	intron_retention	FALSE	canonical	1	301826	junction_2	165413.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	152	1171	85.0	-39	True	NA	NA
PB.11282.39	chr8	-	3044	20	incomplete-splice_match	UBR5	ENST00000521922.5	9008	59	43	57137	-27	-12468	3prime_fragment	FALSE	canonical	1	98900	junction_12	89545.97861743439	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2562	483	3044	45.0	-17	True	AATAAA	-23
PB.3347.6	chr14	-	2848	3	novel_in_catalog	TM9SF1	novel	2452	6	NA	NA	12	-838	intron_retention	FALSE	canonical	1	301826	junction_2	165413.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	114	1133	100.0	-1	True	NA	NA
PB.3347.7	chr14	-	2807	4	novel_not_in_catalog	TM9SF1	novel	2452	6	NA	NA	1	-838	any annotated donor/acceptor	FALSE	canonical	1	2214	junction_1	257480.78400662576	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	359	1417	100.0	0	True	NA	NA
PB.3347.4	chr14	-	1930	5	full-splice_match	TM9SF1	ENST00000396854.8	2055	5	-66	191	3	-191	multi-exon	FALSE	canonical	1	301826	junction_4	120814.22380327368	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	357	1826	35.0	2	True	NA	NA
PB.11282.35	chr8	-	4820	33	incomplete-splice_match	UBR5	ENST00000220959.8	9418	59	-27	40230	-27	4894	3prime_fragment	FALSE	canonical	1	132976	junction_25	80553.25222475114	NA	1	NA	TRUE	NA	NA	NA	C	coding	1446	4338	483	4820	65.0	-17	True	NA	NA
PB.3347.2	chr14	-	2268	6	novel_in_catalog	AL136295.4	novel	4351	31	NA	NA	-5053	-8751	no_combination_of_known_junctions	FALSE	canonical	1	26258	junction_5	205126.04699198977	NA	0	NA	TRUE	NA	NA	NA	A	coding	606	1821	179	1999	15.0	-29	True	AATAAA	-19
PB.3347.3	chr14	-	2126	5	full-splice_match	TM9SF1	ENST00000396854.8	2055	5	-68	-3	1	3	multi-exon	FALSE	canonical	1	301826	junction_4	120814.22380327368	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	359	1828	30.0	0	True	NA	NA
PB.3347.1	chr14	-	2377	6	full-splice_match	TM9SF1	ENST00000261789.8	2452	6	61	14	-8	-8	multi-exon	FALSE	canonical	1	301826	junction_5	108901.81712643732	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	299	2119	45.0	60	True	AATAAA	-8
PB.10371.9	chr7	-	2586	13	novel_not_in_catalog	BRAT1	novel	2915	14	NA	NA	171	24	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	140260.8646329274	NA	10	3	TRUE	NA	NA	NA	C	coding	623	1872	499	2370	25.0	0	True	AATAAA	-21
PB.9948.1	chr6	-	2994	12	novel_not_in_catalog	TEAD3	novel	2729	11	NA	NA	-16	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_8	85505.95253736616	NA	4	1	TRUE	NA	NA	NA	A	coding	369	1110	440	1549	25.0	-19	True	NA	NA
PB.6011.2	chr19	+	2610	5	incomplete-splice_match	SNRPA	ENST00000243563.7	1621	6	337	6	-13	-6	intron_retention	FALSE	canonical	1	853754	junction_3	253255.47361742746	NA	4	NA	TRUE	NA	NA	NA	C	coding	230	693	214	906	20.0	-7	True	ATTAAA	-24
PB.6011.1	chr19	+	1350	6	full-splice_match	SNRPA	ENST00000243563.7	1621	6	269	2	-81	-2	multi-exon	FALSE	canonical	1	853754	junction_3	253426.27454595154	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	282	1130	20.0	-6289	False	ATTAAA	-28
PB.8320.11	chr3	-	1854	7	full-splice_match	CD80	ENST00000264246.7	2725	7	-29	900	-29	-900	multi-exon	FALSE	canonical	1	50720	junction_1	16636.31122641742	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	393	1259	15.0	3021	False	NA	NA
PB.6780.2	chr2	+	5024	29	incomplete-splice_match	RIF1	ENST00000430328.6	7992	34	-192	11370	-2	8908	3prime_fragment	FALSE	canonical	1	108790	junction_2	50688.45095688133	NA	0	NA	TRUE	NA	NA	NA	C	coding	1499	4497	527	5023	75.0	-4	True	NA	NA
PB.9517.1	chr5	+	2926	1	full-splice_match	PCDHB13	ENST00000341948.6	5061	1	11	2124	11	-2124	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	798	2397	195	2591	20.0	-9413	False	ATTAAA	-20
PB.10828.28	chr7	+	2011	5	novel_in_catalog	CALU	novel	3210	6	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	8954	junction_1	1129845.9822651437	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	111	602	90.0	-7	True	NA	NA
PB.10828.29	chr7	+	4151	8	full-splice_match	CALU	ENST00000479257.5	2572	8	-39	-1540	2	-1	multi-exon	FALSE	canonical	1	27271	junction_1	1073055.8650837203	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	871	1842	20.0	-6	True	AATAAA	-17
PB.2199.2	chr11	-	2767	1	full-splice_match	AP000873.2	ENST00000624533.1	2295	1	-460	-12	2	12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	106	321	561	881	70.0	2	True	NA	NA
PB.10828.27	chr7	+	2704	7	novel_in_catalog	CALU	novel	3210	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	484230	junction_3	782627.2004852204	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	570	1295	90.0	-7	True	NA	NA
PB.10828.24	chr7	+	2186	8	novel_in_catalog	CALU	novel	3210	6	NA	NA	-3	191	no_combination_of_known_junctions	FALSE	canonical	1	12548	junction_3	991819.8913490663	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	501	1226	35.0	-11	True	ATTAAA	-15
PB.2199.1	chr11	-	3079	1	full-splice_match	AP000873.2	ENST00000624533.1	2295	1	-442	-342	20	342	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	106	321	543	863	80.0	20	True	AATAAA	-9
PB.10828.22	chr7	+	2621	8	novel_in_catalog	CALU	novel	3210	6	NA	NA	-3	1442	combination_of_known_junctions	FALSE	canonical	1	36804	junction_7	859748.7710536403	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	85	1032	45.0	-11	True	ATTAAA	-12
PB.10828.23	chr7	+	5288	7	full-splice_match	CALU	ENST00000249364.8	3357	7	18	-1949	-3	1616	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	4	NA	TRUE	NA	NA	NA	C	coding	315	948	85	1032	15.0	-11	True	NA	NA
PB.10828.20	chr7	+	3729	7	full-splice_match	CALU	ENST00000249364.8	3357	7	12	-384	-9	51	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	91	1038	45.0	-17	True	ATTAAA	-21
PB.10828.21	chr7	+	4041	7	full-splice_match	CALU	ENST00000249364.8	3357	7	17	-701	-4	368	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	3	NA	TRUE	NA	NA	NA	C	coding	315	948	86	1033	75.0	-12	True	NA	NA
PB.780.64	chr1	-	2261	2	incomplete-splice_match	ADAR	ENST00000649593.1	6537	15	0	18431	0	-315	3prime_fragment	FALSE	canonical	1	262111	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	997	1716	90.0	-13	True	NA	NA
PB.5556.1	chr19	+	2144	7	full-splice_match	CNN2	ENST00000263097.8	2179	7	28	7	-1	-3	multi-exon	FALSE	canonical	1	636343	junction_6	480137.37534330273	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	54	983	45.0	-7	True	AATAAA	-16
PB.5556.2	chr19	+	2242	7	full-splice_match	CNN2	ENST00000562958.6	2194	7	-56	8	-8	-4	multi-exon	FALSE	canonical	1	9717	junction_4	635947.8131060231	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	90	1082	40.0	-43	True	AATAAA	-15
PB.5556.3	chr19	+	2063	6	full-splice_match	CNN2	ENST00000348419.7	2033	6	-37	7	-8	-3	multi-exon	FALSE	canonical	1	105477	junction_4	536313.6702991637	NA	5	NA	TRUE	NA	NA	NA	C	coding	270	813	90	902	45.0	-43	True	AATAAA	-16
PB.5556.4	chr19	+	2266	8	novel_in_catalog	CNN2	novel	2179	7	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	22338	junction_6	739864.7443466285	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	54	839	45.0	-7	True	AATAAA	-16
PB.780.61	chr1	-	2573	2	incomplete-splice_match	ADAR	ENST00000368471.8	6519	15	-8	18109	0	1	3prime_fragment	FALSE	canonical	1	262111	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	993	1712	85.0	-9	True	NA	NA
PB.336.6	chr1	-	5214	13	novel_not_in_catalog	FOXJ3	novel	4468	3	NA	NA	-1	3	any annotated donor/acceptor	FALSE	canonical	1	3125	junction_2	105191.7236304937	NA	3	NA	TRUE	NA	NA	NA	C	coding	617	1854	193	2046	15.0	-2	True	AATAAA	-25
PB.780.63	chr1	-	2335	2	incomplete-splice_match	ADAR	ENST00000529168.2	6343	15	-21	18262	-5	-315	3prime_fragment	FALSE	canonical	1	265041	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	186	1790	90.0	-6	True	NA	NA
PB.6895.3	chr2	-	5038	54	full-splice_match	COL5A2	ENST00000649066.1	6213	54	-71	1246	47	-1246	multi-exon	FALSE	canonical	1	7905	junction_51	167647.55045407306	NA	1	NA	TRUE	NA	NA	NA	C	coding	1498	4497	232	4728	45.0	-28	False	AATAAA	-23
PB.6895.2	chr2	-	6217	54	full-splice_match	COL5A2	ENST00000649066.1	6213	54	-64	60	54	-60	multi-exon	FALSE	canonical	1	7905	junction_51	167647.55045407306	NA	1	1	TRUE	NA	NA	NA	C	coding	1498	4497	225	4721	25.0	-21	False	AATAAA	-35
PB.10653.5	chr7	-	2580	1	novel_in_catalog	SRI	novel	2010	8	NA	NA	-1	-6914	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-26	True	NA	NA
PB.10653.4	chr7	-	2835	7	novel_in_catalog	SRI	novel	2010	8	NA	NA	4	-5	intron_retention	FALSE	canonical	1	868272	junction_5	719065.1829993695	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	50	637	35.0	-40	True	AATAAA	-15
PB.10653.3	chr7	-	831	8	full-splice_match	SRI	ENST00000265729.6	2010	8	6	1173	6	-5	multi-exon	FALSE	canonical	1	868272	junction_6	680502.497042218	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	48	644	35.0	-38	True	AATAAA	-15
PB.10653.2	chr7	-	1582	7	novel_in_catalog	SRI	novel	2010	8	NA	NA	6	-5	intron_retention	FALSE	canonical	1	868272	junction_5	725849.807400723	NA	1	NA	TRUE	NA	NA	NA	C	coding	109	330	1066	1395	35.0	-38	True	AATAAA	-15
PB.10653.1	chr7	-	1974	8	full-splice_match	SRI	ENST00000265729.6	2010	8	41	-5	0	5	multi-exon	TRUE	canonical	1	868272	junction_6	680502.497042218	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	13	609	20.0	-3	True	AATAAA	-19
PB.11298.4	chr8	+	1245	11	full-splice_match	EMC2	ENST00000220853.7	1243	11	3	-5	3	-1	multi-exon	FALSE	canonical	1	496214	junction_4	73650.11817668728	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	33	926	40.0	-10	True	AATAAA	-24
PB.11999.15	chrX	+	3929	6	novel_not_in_catalog	MBTPS2	novel	1862	6	NA	NA	-5	2044	any annotated donor/acceptor	FALSE	canonical	1	4071	junction_5	64887.93543332998	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	105	1895	65.0	2	True	AATAAA	-12
PB.11999.14	chrX	+	2601	5	incomplete-splice_match	MBTPS2	ENST00000465888.1	1862	6	-6	2264	-6	-2264	3prime_fragment	FALSE	canonical	1	119437	junction_4	23551.47719756661	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	106	888	75.0	1	True	NA	NA
PB.10430.19	chr7	-	2855	11	full-splice_match	FAM126A	ENST00000432176.6	13177	11	-21	10343	-20	-45	multi-exon	FALSE	canonical	1	121723	junction_1	48186.87107459874	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	255	1820	30.0	-21	False	AATAAA	-35
PB.11999.11	chrX	+	4444	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-18	2	-18	-2	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	118	1677	15.0	-11	True	AATAAA	-31
PB.11999.10	chrX	+	3795	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-19	652	-19	-652	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	1	NA	TRUE	NA	NA	NA	C	coding	519	1560	119	1678	30.0	-12	True	NA	NA
PB.11999.13	chrX	+	3192	6	novel_not_in_catalog	MBTPS2	novel	1862	6	NA	NA	-17	1295	any annotated donor/acceptor	FALSE	canonical	1	4071	junction_5	64887.93543332998	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	117	1907	95.0	-10	True	NA	NA
PB.11999.12	chrX	+	3460	11	full-splice_match	MBTPS2	ENST00000379484.9	4428	11	-18	986	-18	-986	multi-exon	FALSE	canonical	1	119437	junction_4	20168.755132630275	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	118	1677	65.0	-11	True	NA	NA
PB.3665.35	chr14	-	3653	4	full-splice_match	WARS	ENST00000556579.5	565	4	-43	-3045	1	-2919	multi-exon	FALSE	canonical	1	439719	junction_3	537881.0246274006	NA	1	1	TRUE	NA	NA	NA	C	coding	161	486	157	642	85.0	-32	True	NA	NA
PB.3665.34	chr14	-	2174	8	novel_not_in_catalog	WARS	novel	2938	11	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_7	721910.4612833979	NA	2	1	TRUE	NA	NA	NA	C	coding	238	717	1302	2018	35.0	-1	True	ATTAAA	-7
PB.11920.3	chr9	-	2746	12	novel_in_catalog	ANAPC2	novel	1972	3	NA	NA	-20	0	intron_retention	FALSE	canonical	1	185828	junction_10	91955.67090364163	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	38	2491	0.0	-10	True	ATTAAA	-16
PB.8625.1	chr3	-	2171	3	full-splice_match	CEP19	ENST00000409690.3	2201	3	20	10	20	-10	multi-exon	FALSE	canonical	1	41607	junction_2	16139.0	NA	2	1	TRUE	NA	NA	NA	C	coding	167	504	404	907	40.0	-26	True	AATAAA	-5
PB.3665.31	chr14	-	1934	12	novel_in_catalog	WARS	novel	2938	11	NA	NA	7	214	intron_retention	FALSE	canonical	1	4810	junction_11	734308.7725295591	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	357	1772	20.0	32	True	NA	NA
PB.3665.30	chr14	-	2529	10	novel_in_catalog	WARS	novel	2938	11	NA	NA	0	2	intron_retention	FALSE	canonical	1	706359	junction_9	559386.8824105439	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	1298	2131	35.0	-1	True	AATATA	-18
PB.3665.33	chr14	-	1593	9	incomplete-splice_match	WARS	ENST00000392882.6	2938	11	297	8268	0	-6	3prime_fragment	FALSE	canonical	1	706359	junction_8	481103.1896360534	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	139	1437	35.0	-1	True	ATTAAA	-7
PB.4985.9	chr17	-	3790	17	novel_in_catalog	KAT2A	novel	3109	18	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	249259	junction_11	173704.36833003798	NA	1	NA	TRUE	NA	NA	NA	C	coding	641	1926	60	1985	5.0	-8	True	AATAAA	-11
PB.4985.8	chr17	-	2968	17	novel_in_catalog	KAT2A	novel	3109	18	NA	NA	23	3	no_combination_of_known_junctions	FALSE	canonical	1	14045	junction_10	234003.84793770453	NA	1	NA	TRUE	NA	NA	NA	C	coding	800	2403	32	2434	5.0	20	True	AATAAA	-15
PB.7979.2	chr3	+	3092	8	full-splice_match	NR1D2	ENST00000312521.8	5258	8	33	2133	33	-12	multi-exon	FALSE	canonical	1	72825	junction_1	62271.19004214796	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	287	2026	70.0	4	True	NA	NA
PB.4985.3	chr17	-	3094	18	full-splice_match	KAT2A	ENST00000465682.5	2990	18	-100	-4	-100	4	multi-exon	FALSE	canonical	1	340553	junction_17	160064.8663054578	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	1129	2559	5.0	7195	False	AATAAA	-16
PB.4985.2	chr17	-	3115	18	full-splice_match	KAT2A	ENST00000225916.9	3109	18	-8	2	-8	-2	multi-exon	FALSE	canonical	1	249259	junction_12	171553.448390256	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	63	2576	10.0	-11	True	AATAAA	-20
PB.4985.1	chr17	-	3581	17	novel_in_catalog	KAT2A	novel	3109	18	NA	NA	5	-1	intron_retention	TRUE	canonical	1	340553	junction_16	161093.1667738715	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	1324	2298	10.0	2	True	AATAAA	-21
PB.4985.7	chr17	-	3241	18	novel_in_catalog	KAT2A	novel	3109	18	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	1	17205	junction_5	214514.4651798681	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	1338	2231	5.0	-12	True	AATAAA	-16
PB.7979.1	chr3	+	5225	8	full-splice_match	NR1D2	ENST00000312521.8	5258	8	31	2	31	-2	multi-exon	FALSE	canonical	1	72825	junction_1	62271.19004214796	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1740	289	2028	10.0	2	True	AATAAA	-13
PB.4985.5	chr17	-	3397	18	novel_not_in_catalog	KAT2A	novel	3109	18	NA	NA	2	-4	any annotated donor/acceptor	FALSE	canonical	1	3451	junction_5	216744.10565125078	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	1327	2301	10.0	-1	True	AATAAA	-18
PB.4985.4	chr17	-	3174	17	novel_in_catalog	KAT2A	novel	3109	18	NA	NA	12	-3	no_combination_of_known_junctions	FALSE	canonical	1	14045	junction_10	226095.09457298016	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	1317	2636	10.0	9	True	AATAAA	-19
PB.6005.1	chr19	-	1378	2	full-splice_match	SERTAD3	ENST00000322354.3	1734	2	356	0	-74	0	multi-exon	FALSE	canonical	1	180118	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	196	591	142	732	15.0	-15	False	AATAAA	-17
PB.9972.4	chr6	-	2027	7	novel_not_in_catalog	GLO1	novel	2012	6	NA	NA	13	-8	any annotated donor/acceptor	FALSE	canonical	1	5181	junction_6	1025632.3879904534	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	234	683	45.0	16	True	AATAAA	-11
PB.9972.2	chr6	-	1990	6	full-splice_match	GLO1	ENST00000373365.4	2012	6	-4	26	-4	-8	multi-exon	FALSE	canonical	1	1269260	junction_5	486106.89931536664	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	92	646	45.0	-1	True	AATAAA	-11
PB.9972.3	chr6	-	2714	5	novel_in_catalog	GLO1	novel	2012	6	NA	NA	0	-4	intron_retention	FALSE	canonical	1	1269260	junction_4	436506.4569335573	NA	9	1	TRUE	NA	NA	NA	C	coding	145	438	88	525	25.0	3	True	AATAAA	-33
PB.9972.1	chr6	-	4136	6	full-splice_match	GLO1	ENST00000373365.4	2012	6	-4	-2120	-4	2120	multi-exon	FALSE	canonical	1	1269260	junction_5	486106.89931536664	NA	4	NA	TRUE	NA	NA	NA	C	coding	184	555	92	646	30.0	-1	True	NA	NA
PB.1222.7	chr1	+	2208	8	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	5	-3	any annotated donor/acceptor	FALSE	canonical	1	7590	junction_1	98632.50760519979	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	915	1460	20.0	5	True	ATTAAA	-45
PB.9560.5	chr5	+	4367	24	incomplete-splice_match	TCOF1	ENST00000427724.7	4800	26	-32	1774	-1	3	3prime_fragment	FALSE	canonical	1	118613	junction_20	140672.06744701852	NA	3	NA	TRUE	NA	NA	NA	B	coding	1435	4305	61	4365	70.0	-17	True	NA	NA
PB.8631.1	chr3	-	2379	3	full-splice_match	PIGZ	ENST00000443835.1	675	3	38	-1742	0	-12	multi-exon	FALSE	canonical	1	1877	junction_1	12006.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	888	1577	10.0	-1	True	AATATA	-15
PB.11111.1	chr8	+	1302	14	full-splice_match	POLB	ENST00000265421.8	1329	14	30	-3	3	3	multi-exon	FALSE	canonical	1	277799	junction_1	68457.58729816871	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	141	1148	25.0	-9	True	AATAAA	-20
PB.8631.2	chr3	-	2687	3	full-splice_match	PIGZ	ENST00000412723.5	2701	3	0	14	0	-14	multi-exon	FALSE	canonical	1	17815	junction_1	4037.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	148	1887	15.0	-1	True	AATATA	-13
PB.7924.1	chr3	+	1674	2	full-splice_match	JAGN1	ENST00000307768.5	1675	2	-3	4	-3	-4	multi-exon	FALSE	canonical	1	504547	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	155	706	35.0	-5	True	ATTAAA	-21
PB.9560.2	chr5	+	4051	22	incomplete-splice_match	TCOF1	ENST00000650162.1	4194	23	68	1586	-7	-1586	3prime_fragment	FALSE	canonical	1	62570	junction_6	144849.53239306572	NA	0	NA	TRUE	NA	NA	NA	B	coding	1333	3999	51	4049	15.0	-7	True	AAGAAA	-12
PB.7527.11	chr21	+	2672	14	full-splice_match	MX2	ENST00000330714.7	3042	14	85	285	1	-285	multi-exon	FALSE	canonical	1	30808	junction_1	68057.4055094268	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	100	2247	35.0	0	True	NA	NA
PB.10235.30	chr6	+	4588	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	45	-6	intron_retention	FALSE	canonical	1	10015	junction_3	289900.1373522603	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	1121	2602	35.0	0	True	AATAAA	-43
PB.11662.7	chr9	+	2186	5	incomplete-splice_match	MFSD14B	ENST00000375344.7	3420	12	76903	124	4600	-1	5prime_fragment	FALSE	canonical	1	380594	junction_1	54792.87979461839	NA	9	NA	TRUE	NA	NA	NA	C	coding	211	636	45	680	5.0	-8154	False	AATAAA	-18
PB.7924.2	chr3	+	1169	2	full-splice_match	JAGN1	ENST00000307768.5	1675	2	9	497	7	-31	multi-exon	FALSE	canonical	1	504547	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	143	694	0.0	-2509	False	AATAAA	-18
PB.11060.1	chr8	+	3415	7	full-splice_match	FZD3	ENST00000537916.2	13740	7	-34	10359	-34	-73	multi-exon	TRUE	canonical	1	16130	junction_1	36909.32196914788	NA	3	NA	TRUE	NA	NA	NA	C	coding	666	2001	518	2518	10.0	-125	False	AAAACA	-3
PB.8439.9	chr3	+	2042	6	incomplete-splice_match	ATP1B3	ENST00000286371.7	1811	7	29	3207	27	1097	3prime_fragment	FALSE	canonical	1	282882	junction_1	401122.4451537959	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	160	1053	75.0	0	True	NA	NA
PB.8439.8	chr3	+	3633	6	novel_in_catalog	ATP1B3	novel	734	5	NA	NA	27	20	intron_retention	FALSE	canonical	1	282882	junction_1	401651.986066047	NA	2	NA	TRUE	NA	NA	NA	C	coding	189	570	160	729	25.0	0	True	AATAAA	-20
PB.8439.7	chr3	+	1843	7	full-splice_match	ATP1B3	ENST00000286371.7	1811	7	29	-61	27	31	multi-exon	FALSE	canonical	1	282882	junction_1	368636.2182929579	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	160	999	40.0	0	True	TATAAA	-43
PB.8439.6	chr3	+	4099	5	novel_not_in_catalog	ATP1B3	novel	734	5	NA	NA	25	11	any annotated donor/acceptor	TRUE	canonical	1	11	junction_4	566285.2926001059	NA	4	NA	TRUE	NA	NA	NA	C	coding	116	351	162	512	35.0	-2	True	AATAAA	-11
PB.8439.5	chr3	+	1571	7	novel_not_in_catalog	ATP1B3	novel	734	5	NA	NA	25	11	any annotated donor/acceptor	FALSE	canonical	1	1769	junction_6	430053.1818591032	NA	4	1	TRUE	NA	NA	NA	C	coding	305	918	162	1079	35.0	-2	True	AATAAA	-11
PB.8439.4	chr3	+	4194	5	novel_in_catalog	ATP1B3	novel	734	5	NA	NA	8	1097	intron_retention	FALSE	canonical	1	282882	junction_1	444659.2016671307	NA	3	NA	TRUE	NA	NA	NA	C	coding	189	570	179	748	75.0	-3213	False	NA	NA
PB.8439.3	chr3	+	2335	7	full-splice_match	ATP1B3	ENST00000286371.7	1811	7	7	-531	5	501	multi-exon	FALSE	canonical	1	282882	junction_1	368636.2182929579	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	182	1021	80.0	-3216	False	NA	NA
PB.8439.2	chr3	+	2845	7	full-splice_match	ATP1B3	ENST00000286371.7	1811	7	-13	-1021	-13	991	multi-exon	FALSE	canonical	1	282882	junction_1	368636.2182929579	NA	2	NA	TRUE	NA	NA	NA	C	coding	279	840	202	1041	35.0	-3236	False	ATTAAA	-25
PB.8439.1	chr3	+	1493	7	full-splice_match	ATP1B3	ENST00000286371.7	1811	7	27	291	25	11	multi-exon	FALSE	canonical	1	282882	junction_1	368636.2182929579	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	162	1001	35.0	-2	True	AATAAA	-11
PB.10978.9	chr8	+	7455	28	novel_in_catalog	TNKS	novel	1964	11	NA	NA	-2	-2222	combination_of_known_junctions	FALSE	canonical	1	17555	junction_27	53394.92453919149	NA	1	NA	TRUE	NA	NA	NA	C	coding	1316	3951	29	3979	25.0	-2	True	AATAAA	-36
PB.8181.3	chr3	-	1983	10	full-splice_match	DCP1A	ENST00000610213.5	5994	10	69	3942	2	0	multi-exon	FALSE	canonical	1	7386	junction_2	70905.15476638102	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	25	1773	100.0	1	True	NA	NA
PB.8181.2	chr3	-	2085	11	novel_in_catalog	DCP1A	novel	5994	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	6861	junction_7	97289.6276454998	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	490	1875	100.0	-46	False	NA	NA
PB.10978.1	chr8	+	5862	25	novel_in_catalog	TNKS	novel	1964	11	NA	NA	-8	1856	no_combination_of_known_junctions	FALSE	canonical	1	5946	junction_13	48383.24117111442	NA	1	NA	TRUE	NA	NA	NA	C	coding	1223	3672	35	3706	15.0	-8	True	ATTAAA	-16
PB.10978.3	chr8	+	4501	28	novel_not_in_catalog	TNKS	novel	1964	11	NA	NA	-2	-3880	any annotated donor/acceptor	FALSE	canonical	1	13259	junction_27	53827.89944179041	NA	1	NA	TRUE	NA	NA	NA	C	coding	1316	3951	29	3979	60.0	-2	True	NA	NA
PB.10978.2	chr8	+	7400	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	-2	2222	-2	-2222	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	1	NA	TRUE	NA	NA	NA	C	coding	1327	3984	29	4012	25.0	-2	True	AATAAA	-36
PB.10978.5	chr8	+	4157	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	-2	5465	-2	-48	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	2	NA	TRUE	NA	NA	NA	C	coding	1327	3984	29	4012	40.0	-2	True	TATAAA	-15
PB.9687.3	chr6	+	3956	6	incomplete-splice_match	DUSP22	ENST00000344450.9	1485	8	1	2	1	0	intron_retention	FALSE	canonical	1	207124	junction_4	74514.49013876429	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	443	892	20.0	-11	True	AATAAA	-20
PB.10978.7	chr8	+	5420	27	full-splice_match	TNKS	ENST00000310430.10	9620	27	-2	4202	-2	1108	multi-exon	FALSE	canonical	1	105564	junction_14	36834.22002078965	NA	1	NA	TRUE	NA	NA	NA	C	coding	1327	3984	29	4012	55.0	-2	True	NA	NA
PB.10978.6	chr8	+	6225	28	novel_in_catalog	TNKS	novel	1964	11	NA	NA	-2	1858	combination_of_known_junctions	FALSE	canonical	1	17555	junction_27	53394.92453919149	NA	1	NA	TRUE	NA	NA	NA	C	coding	1316	3951	29	3979	15.0	-2	True	ATTAAA	-18
PB.11507.4	chr9	-	4241	28	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	40083	junction_18	83111.19187005055	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	1070	3430	5.0	277	False	AATAAA	-15
PB.9687.2	chr6	+	2350	6	full-splice_match	DUSP22	ENST00000603795.5	1166	6	52	-1236	-6	-221	multi-exon	FALSE	canonical	1	104367	junction_3	148366.8023331365	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	286	594	30.0	-9	True	AATAAA	-23
PB.8066.6	chr3	+	4306	23	novel_in_catalog	LARS2	novel	4281	22	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	3460	junction_18	57741.52554931673	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	191	2506	30.0	2	True	AATAAA	-17
PB.2560.2	chr12	-	1867	1	full-splice_match	AC008124.1	ENST00000609803.2	9730	1	174	7689	174	-7689	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	ATTAAA	-15
PB.2560.3	chr12	-	1535	1	full-splice_match	AC008124.1	ENST00000609803.2	9730	1	214	7981	214	-7981	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-18	True	AATAAA	-14
PB.4086.19	chr15	-	2823	13	novel_in_catalog	PRC1	novel	3034	15	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	33284	junction_2	257372.9313510709	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	108	1697	40.0	10	True	NA	NA
PB.2560.1	chr12	-	3955	1	full-splice_match	AC008124.1	ENST00000609803.2	9730	1	209	5566	209	-5566	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-23	True	ATTAAA	-18
PB.8066.5	chr3	+	4149	21	novel_in_catalog	LARS2	novel	4281	22	NA	NA	3	7	no_combination_of_known_junctions	FALSE	canonical	1	3461	junction_18	47422.96744468865	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	202	2835	30.0	-9	True	AATAAA	-25
PB.11222.5	chr8	-	4907	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-267	6918	-267	-6918	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	3	NA	TRUE	NA	NA	NA	C	coding	607	1824	550	2373	70.0	79	False	NA	NA
PB.7785.8	chr22	-	2852	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	-7	-30	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	227690.98221932288	NA	9	NA	TRUE	NA	NA	NA	C	coding	165	498	67	564	90.0	77	False	NA	NA
PB.6399.2	chr2	-	2047	8	novel_in_catalog	MEMO1	novel	4505	9	NA	NA	45	609	combination_of_known_junctions	FALSE	canonical	1	108	junction_1	48942.834011753344	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	84	704	100.0	677	False	NA	NA
PB.6399.4	chr2	-	1511	10	full-splice_match	MEMO1	ENST00000404530.5	1482	10	-33	4	29	0	multi-exon	FALSE	canonical	1	108	junction_1	48275.4995327423	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	84	977	45.0	0	True	AATAAA	-15
PB.8181.5	chr3	-	3185	6	novel_not_in_catalog	DCP1A	novel	5994	10	NA	NA	3	-3913	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	72373.37964472848	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	24	614	75.0	2	True	TTTAAA	-40
PB.7785.9	chr22	-	2743	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	-4	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	227690.98221932288	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	31	414	90.0	-5	True	NA	NA
PB.6840.2	chr2	+	4322	12	novel_not_in_catalog	PDK1	novel	842	5	NA	NA	-10	-313	intron_retention	FALSE	canonical	1	3137	junction_9	99944.50772072066	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	111	1325	40.0	-49	True	AATAAA	-20
PB.8181.4	chr3	-	1874	9	full-splice_match	DCP1A	ENST00000294241.10	1853	9	-21	0	-3	0	multi-exon	FALSE	canonical	1	7386	junction_2	89401.68279307932	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	30	1664	100.0	-4	True	NA	NA
PB.9687.9	chr6	+	2989	6	full-splice_match	DUSP22	ENST00000603795.5	1166	6	-248	-1575	-60	96	multi-exon	FALSE	canonical	1	104367	junction_3	148366.8023331365	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	586	894	30.0	-1606	False	NA	NA
PB.8066.1	chr3	+	4838	22	full-splice_match	LARS2	ENST00000265537.7	4281	22	20	-577	20	-7	multi-exon	TRUE	canonical	1	87971	junction_1	36169.18074054452	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2712	243	2954	35.0	-93	False	ATTAAA	-26
PB.11555.6	chr9	-	2445	12	novel_in_catalog	CNTNAP3	novel	5064	24	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	1	157	junction_9	22461.113446124382	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	315	2273	30.0	NA	False	ATTAAA	-11
PB.11222.9	chr8	-	3432	10	full-splice_match	MMP16	ENST00000286614.10	11558	10	-61	8187	-61	-8187	multi-exon	FALSE	canonical	1	27204	junction_1	6272.584050187504	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	344	2167	35.0	-3	True	AATAAA	-25
PB.12263.5	chrX	-	4350	19	full-splice_match	ZNF280C	ENST00000370978.8	4634	19	101	183	85	-183	multi-exon	FALSE	canonical	1	43402	junction_4	5479.426412094203	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	96	2267	40.0	17	True	GATAAA	-25
PB.12263.1	chrX	-	4555	19	full-splice_match	ZNF280C	ENST00000370978.8	4634	19	1	78	1	-78	multi-exon	TRUE	canonical	1	43402	junction_4	5479.426412094203	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	196	2367	15.0	0	True	AATACA	-14
PB.8346.25	chr3	-	2701	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-13	-3990	any annotated donor/acceptor	FALSE	canonical	1	28533	junction_7	158532.45931525572	NA	1	NA	TRUE	NA	NA	NA	C	coding	745	2238	112	2349	25.0	8	True	ATTAAA	-19
PB.8346.24	chr3	-	2607	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-23	-3989	any annotated donor/acceptor	FALSE	canonical	1	41451	junction_9	140480.5833066365	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	122	2254	25.0	-2	True	ATTAAA	-20
PB.8346.27	chr3	-	2073	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-30	-4530	any annotated donor/acceptor	FALSE	canonical	1	41451	junction_9	140480.5833066365	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	129	2072	65.0	-9	True	NA	NA
PB.8346.26	chr3	-	2407	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-348	-4530	any annotated donor/acceptor	FALSE	canonical	1	438	junction_10	162995.79315197066	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1944	463	2406	65.0	-146	False	NA	NA
PB.8346.21	chr3	-	6571	10	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-30	-32	any annotated donor/acceptor	FALSE	canonical	1	41451	junction_9	140480.5833066365	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	129	2261	80.0	-9	True	NA	NA
PB.8346.20	chr3	-	2697	11	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-30	-250	any annotated donor/acceptor	FALSE	canonical	1	41451	junction_10	133328.77333854084	NA	2	1	TRUE	NA	NA	NA	C	coding	819	2460	129	2588	20.0	-9	True	AATATA	-18
PB.8346.22	chr3	-	2722	1	novel_in_catalog	PARP9	novel	3128	11	NA	NA	11477	-32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	194	585	2086	2670	80.0	1315	False	NA	NA
PB.11694.8	chr9	+	3334	20	full-splice_match	RNF20	ENST00000389120.7	3940	20	14	592	14	-592	multi-exon	FALSE	canonical	1	213414	junction_1	75333.80389430495	NA	0	NA	TRUE	NA	NA	NA	C	coding	975	2928	77	3004	40.0	0	True	TATAAA	-22
PB.780.6	chr1	-	6745	17	novel_not_in_catalog	ADAR	novel	6610	15	NA	NA	-6	3	any annotated donor/acceptor	FALSE	canonical	1	4252	junction_16	491936.34064111894	NA	2	1	TRUE	NA	NA	NA	C	coding	931	2796	1237	4032	85.0	-1	True	AATATA	-11
PB.8346.28	chr3	-	2289	10	novel_in_catalog	PARP9	novel	3128	11	NA	NA	-7	-4530	combination_of_known_junctions	FALSE	canonical	1	25956	junction_9	161131.86351403678	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2049	240	2288	65.0	14	True	NA	NA
PB.9299.8	chr5	+	2106	13	incomplete-splice_match	POLK	ENST00000241436.8	5911	15	135	4382	0	-1226	3prime_fragment	FALSE	canonical	1	15478	junction_1	50242.236245112756	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2067	38	2104	60.0	0	True	NA	NA
PB.9299.9	chr5	+	4488	16	novel_not_in_catalog	POLK	novel	5911	15	NA	NA	0	-20	intron_retention	FALSE	canonical	1	10583	junction_6	71574.13406295757	NA	2	NA	TRUE	NA	NA	NA	C	coding	884	2655	38	2692	30.0	0	True	AATAAA	-17
PB.6385.5	chr2	+	1857	10	incomplete-splice_match	SLC4A1AP	ENST00000618046.4	2544	14	0	9818	0	7857	3prime_fragment	FALSE	canonical	1	124351	junction_9	85032.47635266579	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1830	27	1856	60.0	0	True	NA	NA
PB.9688.1	chr6	-	2664	4	antisense	novelGene_DUSP22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4496	junction_3	11467.706348214926	NA	1	NA	FALSE	NA	NA	NA	B	coding	179	540	205	744	15.0	1	True	AATATA	-11
PB.6385.3	chr2	+	2642	10	incomplete-splice_match	SLC4A1AP	ENST00000618046.4	2544	14	0	9033	0	8642	3prime_fragment	FALSE	canonical	1	124351	junction_9	85032.47635266579	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	27	2030	70.0	0	True	NA	NA
PB.6385.2	chr2	+	3227	13	novel_in_catalog	SLC4A1AP	novel	2959	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	2441	junction_12	153474.58789348934	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	27	2075	30.0	0	True	ATTAAA	-23
PB.6385.1	chr2	+	2549	14	full-splice_match	SLC4A1AP	ENST00000618046.4	2544	14	-2	-3	-2	-1	multi-exon	FALSE	canonical	1	2441	junction_13	159304.9379195828	NA	1	NA	TRUE	NA	NA	NA	C	coding	742	2229	29	2257	30.0	-2	True	ATTAAA	-22
PB.11716.15	chr9	-	5742	50	novel_not_in_catalog	ECPAS	novel	7078	49	NA	NA	-27	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_49	235976.1442955476	NA	0	NA	TRUE	NA	NA	NA	C	coding	1845	5538	64	5601	25.0	337	False	AATAAA	-14
PB.9299.1	chr5	+	3722	15	full-splice_match	POLK	ENST00000241436.8	5911	15	131	2058	-4	-16	multi-exon	FALSE	canonical	1	15478	junction_1	50516.86104052542	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	42	2654	85.0	-4	True	NA	NA
PB.9299.2	chr5	+	3619	14	novel_in_catalog	POLK	novel	5911	15	NA	NA	-3	-16	combination_of_known_junctions	FALSE	canonical	1	4009	junction_1	54836.51784399187	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	137	2551	85.0	-222	False	NA	NA
PB.9299.3	chr5	+	3866	16	novel_in_catalog	POLK	novel	5911	15	NA	NA	-12	-17	no_combination_of_known_junctions	FALSE	canonical	1	2427	junction_1	63104.58366200949	NA	1	1	TRUE	NA	NA	NA	C	coding	870	2613	187	2799	85.0	-12	True	NA	NA
PB.9299.4	chr5	+	2454	14	novel_in_catalog	POLK	novel	5911	15	NA	NA	-7	-25	combination_of_known_junctions	FALSE	canonical	1	4009	junction_1	54836.51784399187	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2358	95	2452	75.0	-7	True	NA	NA
PB.7785.2	chr22	-	3190	5	full-splice_match	CBX6	ENST00000216083.6	3191	5	-29	30	4	-30	multi-exon	FALSE	canonical	1	33924	junction_1	194615.4412673555	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	56	1240	90.0	-30	True	NA	NA
PB.9299.6	chr5	+	4373	15	full-splice_match	POLK	ENST00000241436.8	5911	15	136	1402	1	-92	multi-exon	FALSE	canonical	1	15478	junction_1	50516.86104052542	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	37	2649	35.0	1	True	AATAAA	-20
PB.9299.7	chr5	+	3550	14	novel_in_catalog	POLK	novel	5911	15	NA	NA	-4	-16	combination_of_known_junctions	FALSE	canonical	1	15478	junction_1	63310.86816961629	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	42	1511	85.0	-4	True	NA	NA
PB.6423.4	chr2	-	3841	3	full-splice_match	CYP1B1	ENST00000610745.4	5250	3	30	1379	3	1180	multi-exon	FALSE	canonical	1	290465	junction_2	36660.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	374	2005	55.0	-1	True	NA	NA
PB.2370.2	chr11	-	5024	27	novel_in_catalog	NFRKB	novel	5093	26	NA	NA	-12	-140	combination_of_known_junctions	TRUE	canonical	1	54615	junction_25	72821.66943614693	NA	0	NA	TRUE	NA	NA	NA	B	coding	1299	3900	176	4075	25.0	-13	True	NA	NA
PB.2370.1	chr11	-	5093	27	novel_in_catalog	NFRKB	novel	5093	26	NA	NA	-12	-140	combination_of_known_junctions	FALSE	canonical	1	53617	junction_21	76192.54162586888	NA	1	NA	TRUE	NA	NA	NA	B	coding	1311	3936	209	4144	25.0	-46	False	NA	NA
PB.12254.18	chrX	+	4263	34	full-splice_match	STAG2	ENST00000371144.7	4281	34	-1	19	0	-19	multi-exon	FALSE	canonical	1	41416	junction_1	196728.53638855525	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	282	3977	95.0	0	True	NA	NA
PB.12254.19	chrX	+	4198	33	full-splice_match	STAG2	ENST00000371157.7	5991	33	20	1773	0	-19	multi-exon	FALSE	canonical	1	155760	junction_1	169489.4732335185	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	217	3912	95.0	0	True	NA	NA
PB.2370.5	chr11	-	4776	28	novel_not_in_catalog	NFRKB	novel	5093	26	NA	NA	0	-145	any annotated donor/acceptor	FALSE	canonical	1	18697	junction_4	81697.65389413096	NA	0	NA	TRUE	NA	NA	NA	B	coding	1222	3669	164	3832	25.0	-1	True	NA	NA
PB.2370.4	chr11	-	5131	28	novel_in_catalog	NFRKB	novel	5093	26	NA	NA	0	-143	combination_of_known_junctions	FALSE	canonical	1	23160	junction_26	80435.43206695032	NA	1	NA	TRUE	NA	NA	NA	B	coding	1299	3900	286	4185	20.0	-34	True	NA	NA
PB.12254.14	chrX	+	4860	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-12	-96	combination_of_known_junctions	FALSE	canonical	1	155760	junction_1	190678.8834772444	NA	2	NA	TRUE	NA	NA	NA	C	coding	1268	3807	249	4055	35.0	-32	True	AATAAA	-16
PB.12254.15	chrX	+	4406	35	full-splice_match	STAG2	ENST00000371145.7	4393	35	-32	19	-12	-19	multi-exon	FALSE	canonical	1	41416	junction_1	211981.9310765636	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	314	4120	95.0	-32	True	NA	NA
PB.12254.16	chrX	+	4329	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	0	-19	combination_of_known_junctions	FALSE	canonical	1	155760	junction_1	190678.8834772444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	237	4043	95.0	-20	True	NA	NA
PB.12254.17	chrX	+	5933	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-10	-159	combination_of_known_junctions	FALSE	canonical	1	155760	junction_1	190678.8834772444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	227	4033	10.0	-10	True	AATAAA	-14
PB.12254.10	chrX	+	2949	22	novel_not_in_catalog	STAG2	novel	385	4	NA	NA	21	-19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	196520.871948899	NA	3	1	TRUE	NA	NA	NA	C	coding	785	2358	306	2663	95.0	-9	True	NA	NA
PB.12254.11	chrX	+	4833	33	novel_in_catalog	STAG2	novel	385	4	NA	NA	30	-3	combination_of_known_junctions	FALSE	canonical	1	134786	junction_1	171285.3849921846	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	240	3935	30.0	0	True	AATAAA	-16
PB.12254.12	chrX	+	4268	34	novel_in_catalog	STAG2	novel	385	4	NA	NA	-2	-19	combination_of_known_junctions	FALSE	canonical	1	8961	junction_1	199548.42692325223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	287	3982	95.0	0	True	NA	NA
PB.12254.13	chrX	+	5811	33	full-splice_match	STAG2	ENST00000371157.7	5991	33	22	158	1	-158	multi-exon	FALSE	canonical	1	155760	junction_1	169489.4732335185	NA	10	2	TRUE	NA	NA	NA	C	coding	1231	3696	215	3910	10.0	2	True	AATAAA	-15
PB.5893.8	chr19	+	8499	1	novel_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	305	918	785	1702	20.0	0	True	NA	NA
PB.11745.3	chr9	-	3896	11	novel_not_in_catalog	WHRN	novel	2847	12	NA	NA	-52	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	45253.096240588886	NA	5	NA	TRUE	NA	NA	NA	B	coding	379	1140	702	1841	15.0	-30	True	AATAAA	-18
PB.7776.1	chr22	+	1652	1	antisense	novelGene_DDX17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	1067	False	NA	NA
PB.7785.6	chr22	-	2917	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	0	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	187097.0013976707	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	27	629	90.0	-1	True	NA	NA
PB.11456.1	chr9	+	2957	8	full-splice_match	TYRP1	ENST00000388918.9	2851	8	-147	41	-21	-41	multi-exon	FALSE	canonical	1	226045	junction_1	84082.09332356961	NA	5	NA	TRUE	NA	NA	NA	C	coding	537	1614	277	1890	70.0	-9097	False	ATTAAA	-7
PB.5893.9	chr19	+	3615	5	novel_not_in_catalog	AC079466.1	novel	4453	4	NA	NA	43	0	any annotated donor/acceptor	FALSE	canonical	1	12879	junction_3	31304.242223499037	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	226	819	20.0	0	True	NA	NA
PB.10642.2	chr7	-	5655	20	novel_in_catalog	SEMA3A	novel	8225	17	NA	NA	2	-2572	combination_of_known_junctions	FALSE	canonical	1	3408	junction_19	39312.298282321615	NA	1	NA	TRUE	NA	NA	NA	B	coding	771	2316	318	2633	45.0	-1	True	AATACA	-10
PB.5869.1	chr19	+	2547	4	full-splice_match	ZNF253	ENST00000589717.1	3519	4	-55	1027	-36	-1	multi-exon	FALSE	canonical	1	44467	junction_2	11148.177818220638	NA	1	NA	TRUE	NA	NA	NA	C	coding	499	1500	148	1647	30.0	0	True	AATACA	-18
PB.7240.2	chr20	+	3353	11	full-splice_match	CBFA2T2	ENST00000342704.10	2864	11	0	-489	0	489	multi-exon	FALSE	canonical	1	35408	junction_1	34760.780909525034	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	242	1969	10.0	-30	True	NA	NA
PB.8553.14	chr3	+	3603	22	novel_not_in_catalog	YEATS2	novel	6506	31	NA	NA	279	2	any annotated donor/acceptor	FALSE	canonical	1	17195	junction_1	77463.21445160022	NA	0	NA	TRUE	NA	NA	NA	C	coding	1033	3102	134	3235	15.0	8	True	AATAAA	-20
PB.11128.4	chr8	-	5529	24	full-splice_match	RB1CC1	ENST00000025008.9	6635	24	-24	1130	10	-2	multi-exon	FALSE	canonical	1	145642	junction_23	95105.45031042428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1594	4785	549	5333	20.0	-22	True	AATAAA	-24
PB.11847.4	chr9	-	2158	6	novel_not_in_catalog	TOR1A	novel	2076	5	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	336200.56047222763	NA	2	NA	TRUE	NA	NA	NA	C	coding	161	486	645	1130	15.0	20	True	AATAAA	-14
PB.3620.8	chr14	-	3479	12	full-splice_match	TC2N	ENST00000340892.9	4708	12	229	1000	229	-224	multi-exon	FALSE	canonical	1	31630	junction_11	73876.21420193321	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	86	1558	20.0	0	True	AATAAA	-31
PB.3620.9	chr14	-	2936	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-31	846	-31	-846	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	165	1637	20.0	4814	False	AATAAA	-21
PB.4648.3	chr17	-	3499	11	novel_in_catalog	PITPNA	novel	3912	12	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	347301.47641148895	NA	1	1	TRUE	NA	NA	NA	A	coding	168	507	425	931	25.0	-11	True	AATAAA	-10
PB.3620.2	chr14	-	4517	11	full-splice_match	TC2N	ENST00000556018.5	1770	11	38	-2785	38	141	multi-exon	FALSE	canonical	1	19025	junction_3	95259.88980069208	NA	2	NA	TRUE	NA	NA	NA	C	coding	426	1281	175	1455	55.0	-1	True	ATTAAA	-25
PB.3620.3	chr14	-	4675	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-173	-751	-94	-25	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	307	1779	35.0	4672	False	AATAAA	-18
PB.4871.1	chr17	+	1460	7	full-splice_match	TP53I13	ENST00000301057.7	1530	7	69	1	-47	0	multi-exon	FALSE	canonical	1	187693	junction_1	109812.83106988606	NA	0	NA	TRUE	NA	NA	NA	A	coding	393	1182	47	1228	15.0	0	True	ATTAAA	-14
PB.2844.2	chr12	+	2462	1	antisense	novelGene_NT5DC3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.3620.6	chr14	-	3874	12	full-splice_match	TC2N	ENST00000340892.9	4708	12	21	813	21	-37	multi-exon	FALSE	canonical	1	31630	junction_11	73876.21420193321	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	294	1766	80.0	-3	True	NA	NA
PB.3620.7	chr14	-	3687	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-163	227	-84	-227	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	297	1769	20.0	4682	False	AATAAA	-28
PB.3620.4	chr14	-	4054	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-152	-151	-73	151	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	286	1758	35.0	4693	False	AATAAA	-17
PB.3620.5	chr14	-	3770	12	full-splice_match	TC2N	ENST00000360594.9	3751	12	-56	37	23	-37	multi-exon	FALSE	canonical	1	53077	junction_11	68708.77618189123	NA	9	1	TRUE	NA	NA	NA	C	coding	490	1473	190	1662	80.0	4789	False	NA	NA
PB.9462.4	chr5	+	2078	6	novel_not_in_catalog	TXNDC15	novel	3548	5	NA	NA	9	-249	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	219870.10455321113	NA	0	NA	TRUE	NA	NA	NA	B	coding	348	1047	80	1126	25.0	14	True	AATAAA	-17
PB.9462.5	chr5	+	2019	6	novel_not_in_catalog	TXNDC15	novel	3548	5	NA	NA	-10	-243	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	219870.10455321113	NA	0	NA	TRUE	NA	NA	NA	B	coding	348	1047	78	1124	35.0	16	True	AATAAA	-23
PB.2448.11	chr12	-	3679	9	full-splice_match	SLC2A3	ENST00000486749.5	4414	9	-20	755	0	-755	multi-exon	FALSE	canonical	1	214792	junction_4	220627.27434206626	NA	2	NA	TRUE	NA	NA	NA	C	coding	233	702	154	855	25.0	-1	True	AATAAA	-15
PB.2448.10	chr12	-	3075	10	full-splice_match	SLC2A3	ENST00000075120.11	3915	10	88	752	0	-751	multi-exon	FALSE	canonical	1	171375	junction_5	261639.348688558	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	154	1644	25.0	-1	True	AATAAA	-19
PB.9462.2	chr5	+	2345	6	novel_not_in_catalog	TXNDC15	novel	3548	5	NA	NA	-8	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	219870.10455321113	NA	0	NA	TRUE	NA	NA	NA	B	coding	348	1047	102	1148	35.0	-8	True	TATAAA	-14
PB.2448.12	chr12	-	2513	10	full-splice_match	SLC2A3	ENST00000075120.11	3915	10	88	1314	0	527	multi-exon	FALSE	canonical	1	171375	junction_5	261639.348688558	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	154	1644	30.0	-1	True	AATAAA	-19
PB.2125.3	chr11	-	3222	6	novel_in_catalog	MRPL21	novel	662	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	516131	junction_2	280290.24875039805	NA	10	NA	TRUE	NA	NA	NA	B	coding	120	363	2812	3174	25.0	0	True	AATAAA	-13
PB.2125.2	chr11	-	3292	6	novel_in_catalog	MRPL21	novel	662	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	35858	junction_2	417606.539882986	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	11	True	AATAAA	-13
PB.2125.1	chr11	-	1847	7	novel_not_in_catalog	MRPL21	novel	662	7	NA	NA	-2	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	399389.2080362282	NA	2	NA	TRUE	NA	NA	NA	B	coding	120	363	1433	1795	15.0	-6	True	AATAAA	-17
PB.9230.2	chr5	-	1591	6	full-splice_match	PLPP1	ENST00000307259.8	1597	6	-42	48	-42	-48	multi-exon	FALSE	canonical	1	628516	junction_5	262087.18408499108	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	464	1318	40.0	-1	True	ATTAAA	-21
PB.9230.1	chr5	-	1571	6	full-splice_match	PLPP1	ENST00000264775.9	1550	6	-18	-3	-18	3	multi-exon	FALSE	canonical	1	71855	junction_4	580130.6227711135	NA	17	1	TRUE	NA	NA	NA	C	coding	285	858	359	1216	25.0	-1	True	ATTAAA	-22
PB.11780.32	chr9	+	2869	11	novel_in_catalog	NEK6	novel	2578	10	NA	NA	-122	0	no_combination_of_known_junctions	FALSE	canonical	1	3295	junction_1	270618.41139480885	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	335	1378	30.0	247	False	AATAAA	-41
PB.1502.28	chr10	+	5038	10	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	5648	-727	any annotated donor/acceptor	FALSE	canonical	1	1476	junction_1	170520.56407177998	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	298	1110	95.0	-4070	False	NA	NA
PB.1502.29	chr10	+	2181	11	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	5661	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	197460.3173877982	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	285	1097	40.0	-4057	False	AATAAA	-26
PB.1502.26	chr10	+	2800	10	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	5614	-3	any annotated donor/acceptor	FALSE	canonical	1	1476	junction_1	170520.56407177998	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	332	1144	5.0	-4104	False	AATATA	-15
PB.1502.27	chr10	+	2621	9	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	5648	0	any annotated donor/acceptor	FALSE	canonical	1	759	junction_1	162074.55852896647	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	157	969	15.0	-4070	False	AATATA	-11
PB.1502.24	chr10	+	2853	10	novel_in_catalog	TSPAN14	novel	16183	9	NA	NA	-17	0	no_combination_of_known_junctions	FALSE	canonical	1	2512	junction_1	170266.89348660898	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	382	1194	5.0	0	True	AATATA	-18
PB.1910.1	chr11	+	2006	2	full-splice_match	SLC35C1	ENST00000314134.3	4171	2	713	1452	-30	5	multi-exon	FALSE	canonical	1	180193	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	684	1778	10.0	-30	True	NA	NA
PB.1502.22	chr10	+	2678	9	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	20	2	any annotated donor/acceptor	FALSE	canonical	1	178	junction_1	162255.37487014104	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	212	1024	5.0	-4943	False	AATATA	-13
PB.1502.23	chr10	+	2680	10	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	877	0	any annotated donor/acceptor	FALSE	canonical	1	355	junction_1	222979.59571230883	NA	12	NA	TRUE	NA	NA	NA	C	coding	225	678	98	775	15.0	-4086	False	AATATA	-11
PB.1502.20	chr10	+	1709	2	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	11	True	AATATA	-10
PB.1502.21	chr10	+	2824	10	novel_not_in_catalog	TSPAN14	novel	16183	9	NA	NA	20	0	any annotated donor/acceptor	FALSE	canonical	1	281	junction_1	170813.46960614345	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	353	1165	5.0	-4943	False	AATATA	-18
PB.7487.5	chr21	-	4653	19	novel_in_catalog	SCAF4	novel	4193	20	NA	NA	-48	-6	intron_retention	FALSE	canonical	1	146965	junction_18	76493.76074203619	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	2464	4293	35.0	-6	True	AATAAA	-13
PB.8519.23	chr3	-	3564	22	novel_in_catalog	PLD1	novel	5855	26	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	1	1950	junction_1	31793.845133482708	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	88	2721	25.0	9	True	AATAAA	-10
PB.8519.22	chr3	-	3648	22	novel_in_catalog	PLD1	novel	5855	26	NA	NA	25	-4	combination_of_known_junctions	FALSE	canonical	1	1950	junction_1	35092.88642828459	NA	1	NA	TRUE	NA	NA	NA	C	coding	877	2634	172	2805	25.0	-9	True	AATAAA	-10
PB.8519.21	chr3	-	3175	26	novel_not_in_catalog	PLD1	novel	5855	26	NA	NA	-2	-3	any annotated donor/acceptor	TRUE	canonical	1	687	junction_22	36720.56448250217	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	98	3043	20.0	-1	True	AATAAA	-18
PB.8519.20	chr3	-	3226	26	novel_in_catalog	PLD1	novel	5855	26	NA	NA	-50	-2	combination_of_known_junctions	FALSE	canonical	1	6240	junction_1	31698.158448717495	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	178	3093	20.0	791	False	AATAAA	-19
PB.7457.1	chr21	-	6322	1	intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.5412.1	chr18	+	1913	2	incomplete-splice_match	ANKRD20A5P	ENST00000581181.5	1180	3	-17	2405	-17	-32	3prime_fragment	FALSE	canonical	1	8081	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	142	429	270	698	90.0	NA	False	NA	NA
PB.7369.8	chr20	+	1937	6	full-splice_match	CSTF1	ENST00000217109.8	4290	6	242	2111	-15	-204	multi-exon	FALSE	canonical	1	210221	junction_1	125309.12079270207	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	111	1406	25.0	-18	True	AATAAA	-18
PB.10791.1	chr7	+	3409	1	novel_in_catalog	IFRD1	novel	1834	13	NA	NA	2	-1987	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	AAAAAG	-12
PB.10791.2	chr7	+	3268	12	full-splice_match	IFRD1	ENST00000403825.7	2290	12	32	-1010	2	2	multi-exon	FALSE	canonical	1	448975	junction_1	151384.25924707338	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	230	1585	10.0	0	True	AATAAA	-34
PB.10791.3	chr7	+	2879	2	incomplete-splice_match	IFRD1	ENST00000429071.5	1938	4	2	18	2	-18	intron_retention	FALSE	canonical	1	448975	junction_1	0.0	NA	29	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.10791.4	chr7	+	2141	12	full-splice_match	IFRD1	ENST00000403825.7	2290	12	146	3	116	-3	multi-exon	FALSE	canonical	1	448975	junction_1	151384.25924707338	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	116	1471	30.0	4	True	AATAAA	-18
PB.10791.5	chr7	+	2146	11	novel_in_catalog	IFRD1	novel	574	3	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	45509	junction_7	247799.61327946014	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	230	1057	30.0	0	True	AATAAA	-18
PB.10791.6	chr7	+	1918	4	full-splice_match	IFRD1	ENST00000429071.5	1938	4	2	18	2	-18	multi-exon	FALSE	canonical	1	448975	junction_1	121038.19047171297	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	230	676	90.0	0	True	NA	NA
PB.10791.7	chr7	+	1791	12	full-splice_match	IFRD1	ENST00000403825.7	2290	12	32	467	2	198	multi-exon	FALSE	canonical	1	448975	junction_1	151384.25924707338	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	230	1585	20.0	0	True	ATTAAA	-31
PB.10791.8	chr7	+	2837	12	full-splice_match	IFRD1	ENST00000403825.7	2290	12	34	-581	4	-427	multi-exon	FALSE	canonical	1	448975	junction_1	151384.25924707338	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	228	1583	35.0	2	True	AATAAA	-27
PB.10791.9	chr7	+	2058	12	full-splice_match	IFRD1	ENST00000535603.5	3397	12	328	1011	328	-3	multi-exon	FALSE	canonical	1	9625	junction_1	239161.25492929528	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	183	1388	30.0	-7880	False	AATAAA	-18
PB.356.2	chr1	+	2269	12	full-splice_match	ST3GAL3	ENST00000347631.7	2299	12	33	-3	3	3	multi-exon	FALSE	canonical	1	63638	junction_1	37630.959877989335	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	195	1322	5.0	-6	True	AATAAA	-22
PB.6811.1	chr2	+	1897	8	novel_in_catalog	GCA	novel	814	6	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	1960	junction_1	282453.2830393626	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	416	1012	35.0	-2561	False	AATAAA	-27
PB.10400.11	chr7	+	2001	4	novel_not_in_catalog	C1GALT1	novel	802	4	NA	NA	255	-4539	any annotated donor/acceptor	FALSE	canonical	1	7307	junction_1	59821.5914922586	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	529	1620	65.0	0	True	AATAAA	-13
PB.6338.44	chr2	-	4744	20	novel_in_catalog	PUM2	novel	6112	20	NA	NA	-6	-197	combination_of_known_junctions	FALSE	canonical	1	236917	junction_8	196211.1807654971	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	263	3220	35.0	-7	True	ATTAAA	-23
PB.11694.2	chr9	+	1913	13	incomplete-splice_match	RNF20	ENST00000389120.7	3940	20	2	10667	2	-8775	3prime_fragment	FALSE	canonical	1	213414	junction_1	69787.9593421307	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1824	89	1912	60.0	-12	True	NA	NA
PB.1182.4	chr1	-	2509	6	novel_not_in_catalog	TRIM11	novel	5774	5	NA	NA	6	-3	any annotated donor/acceptor	FALSE	canonical	1	3424	junction_3	76382.09468560024	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	728	1483	15.0	0	True	AATAAA	-17
PB.10400.10	chr7	+	2100	5	novel_not_in_catalog	C1GALT1	novel	802	4	NA	NA	21	-4297	any annotated donor/acceptor	FALSE	canonical	1	19892	junction_1	54241.49675525188	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	386	1477	20.0	-8	True	AATAAA	-18
PB.6014.10	chr19	+	3337	15	full-splice_match	HNRNPUL1	ENST00000595196.5	3043	15	32	-326	-8	0	multi-exon	FALSE	canonical	1	204741	junction_1	536417.2485654384	NA	1	NA	TRUE	NA	NA	NA	C	coding	716	2151	376	2526	10.0	-638	False	NA	NA
PB.6014.11	chr19	+	3111	15	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	204741	junction_1	648625.5813210786	NA	1	NA	TRUE	NA	NA	NA	C	coding	726	2181	478	2658	70.0	-740	False	NA	NA
PB.6014.12	chr19	+	3291	15	full-splice_match	HNRNPUL1	ENST00000392006.7	3555	15	263	1	136	-1	multi-exon	FALSE	canonical	1	692087	junction_1	447819.3468111355	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	211	2481	10.0	-487	False	NA	NA
PB.6014.13	chr19	+	3302	15	novel_not_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	-18	73	intron_retention	TRUE	non_canonical	0	0	junction_14	629362.7337861981	NA	2	NA	TRUE	NA	NA	NA	C	coding	819	2460	151	2610	35.0	0	True	AATAAA	-19
PB.6014.14	chr19	+	3566	15	full-splice_match	HNRNPUL1	ENST00000392006.7	3555	15	234	-245	107	23	multi-exon	FALSE	canonical	1	692087	junction_1	447819.3468111355	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	240	2510	0.0	-2	True	AAGAAA	-17
PB.6014.15	chr19	+	2965	14	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	28271	junction_13	646497.529227732	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	133	2511	75.0	-6	True	NA	NA
PB.6014.16	chr19	+	2928	13	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2202	junction_2	672006.9688518655	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	133	2475	70.0	-6	True	NA	NA
PB.6014.17	chr19	+	3849	15	novel_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	5	88	intron_retention	FALSE	canonical	1	265865	junction_13	582684.9829684333	NA	1	NA	TRUE	NA	NA	NA	C	coding	866	2601	128	2728	30.0	-1	True	AATAAA	-34
PB.6014.18	chr19	+	3626	15	full-splice_match	HNRNPUL1	ENST00000595196.5	3043	15	-33	-550	6	2	multi-exon	FALSE	canonical	1	204741	junction_1	536417.2485654384	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	441	2591	20.0	0	True	NA	NA
PB.6014.19	chr19	+	3128	15	novel_not_in_catalog	HNRNPUL1	novel	3426	15	NA	NA	6	-1	intron_retention	FALSE	canonical	1	71	junction_1	577719.1537923209	NA	7	1	TRUE	NA	NA	NA	C	coding	716	2151	525	2675	70.0	0	True	NA	NA
PB.10518.1	chr7	-	2819	10	novel_in_catalog	POLM	novel	2444	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	63303	junction_1	33788.03154307092	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	191	1048	20.0	-4	True	AAAACA	-7
PB.720.3	chr1	-	2015	6	full-splice_match	APH1A	ENST00000360244.8	2353	6	338	0	34	0	multi-exon	FALSE	canonical	1	1124828	junction_5	404911.06175801123	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	156	899	20.0	48	True	AATAAA	-12
PB.720.2	chr1	-	1666	7	full-splice_match	APH1A	ENST00000369109.7	1713	7	45	2	45	0	multi-exon	FALSE	canonical	1	716037	junction_1	558119.8072005538	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	145	942	20.0	59	True	AATAAA	-12
PB.12256.14	chrX	-	2643	19	incomplete-splice_match	SMARCA1	ENST00000371123.5	3948	24	-25	24724	-10	-24384	3prime_fragment	FALSE	canonical	1	103366	junction_7	81688.88939564819	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2502	141	2642	55.0	-21	False	AAAAAG	-38
PB.12256.15	chrX	-	2676	20	incomplete-splice_match	SMARCA1	ENST00000371121.4	3564	25	-111	24393	-16	-24393	3prime_fragment	FALSE	canonical	1	195420	junction_8	73374.30681839748	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2529	147	2675	60.0	-27	False	AAAAAG	-29
PB.12256.12	chrX	-	3266	24	incomplete-splice_match	SMARCA1	ENST00000371121.4	3564	25	-159	1556	-64	-1556	3prime_fragment	FALSE	canonical	1	195420	junction_12	93349.149388648	NA	1	NA	TRUE	NA	NA	NA	C	coding	1024	3072	195	3266	60.0	-75	False	NA	NA
PB.12256.13	chrX	-	3165	23	incomplete-splice_match	SMARCA1	ENST00000371123.5	3948	24	-14	1896	1	-1556	3prime_fragment	FALSE	canonical	1	103366	junction_11	99193.82755627722	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3036	130	3165	60.0	-10	False	NA	NA
PB.12256.10	chrX	-	4804	23	novel_in_catalog	SMARCA1	novel	4291	23	NA	NA	3	85	intron_retention	FALSE	canonical	1	103366	junction_11	99193.82755627722	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3129	128	3256	25.0	-8	True	ATTAAA	-14
PB.12256.11	chrX	-	3815	24	novel_in_catalog	SMARCA1	novel	4291	23	NA	NA	-39	85	no_combination_of_known_junctions	FALSE	canonical	1	78159	junction_1	110937.63801651949	NA	1	NA	TRUE	NA	NA	NA	C	coding	1036	3111	170	3280	25.0	-50	False	ATTAAA	-14
PB.1076.7	chr1	-	2957	11	novel_in_catalog	EIF2D	novel	750	6	NA	NA	-129	-13	combination_of_known_junctions	FALSE	canonical	1	32629	junction_9	212492.31858822567	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	234	1325	55.0	3017	False	NA	NA
PB.1076.6	chr1	-	3301	13	incomplete-splice_match	EIF2D	ENST00000271764.6	2005	15	-10	2411	-6	-13	3prime_fragment	FALSE	canonical	1	513151	junction_6	100212.22598066565	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	128	1669	55.0	-6	True	NA	NA
PB.7487.6	chr21	-	4033	20	full-splice_match	SCAF4	ENST00000399804.5	4127	20	88	6	-19	-6	multi-exon	FALSE	canonical	1	146965	junction_19	81922.91913845725	NA	1	NA	TRUE	NA	NA	NA	C	coding	1125	3378	296	3673	35.0	-5	True	AATAAA	-13
PB.1076.4	chr1	-	1952	15	full-splice_match	EIF2D	ENST00000271764.6	2005	15	49	4	40	-4	multi-exon	FALSE	canonical	1	513151	junction_8	92813.31930951505	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	69	1823	20.0	2	True	AATAAA	-15
PB.9949.2	chr6	-	4189	11	full-splice_match	FKBP5	ENST00000357266.8	3772	11	-35	-382	-30	377	multi-exon	FALSE	canonical	1	554604	junction_10	105808.02207413198	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	189	1562	100.0	-32	False	NA	NA
PB.11240.14	chr8	-	3219	4	full-splice_match	RAD54B	ENST00000297592.5	1879	4	-47	-1293	0	1293	multi-exon	FALSE	canonical	1	33331	junction_1	33425.5078146416	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	479	955	65.0	5	True	NA	NA
PB.11226.27	chr8	-	4340	16	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-46	-20	any annotated donor/acceptor	FALSE	canonical	1	8392	junction_12	195789.19706884294	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	877	2262	65.0	2965	False	NA	NA
PB.11226.26	chr8	-	6093	14	novel_in_catalog	NBN	novel	4666	16	NA	NA	3	-4	intron_retention	FALSE	canonical	1	213812	junction_13	109089.92077436033	NA	5	NA	TRUE	NA	NA	NA	C	coding	603	1812	2188	3999	20.0	50	True	NA	NA
PB.11226.25	chr8	-	4075	14	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-29	-3	any annotated donor/acceptor	FALSE	canonical	1	41	junction_3	183546.00251114837	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	137	1840	15.0	-32	True	NA	NA
PB.9949.3	chr6	-	3711	11	full-splice_match	FKBP5	ENST00000357266.8	3772	11	-5	66	0	-66	multi-exon	FALSE	canonical	1	554604	junction_10	105808.02207413198	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	159	1532	70.0	-2	True	ATTAAA	-13
PB.2836.18	chr12	-	2136	12	incomplete-splice_match	GNPTAB	ENST00000299314.11	5701	21	68	20265	-27	-1	3prime_fragment	FALSE	canonical	1	236301	junction_11	44761.43774195901	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	196	1845	25.0	-13	True	AATAAA	-18
PB.1395.8	chr10	+	1618	16	incomplete-splice_match	WASHC2C	ENST00000540872.6	4327	29	5	35673	4	5578	3prime_fragment	FALSE	canonical	1	872	junction_5	114579.08841056275	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1539	79	1617	50.0	-26	True	AATAAA	-11
PB.2836.14	chr12	-	4925	21	full-splice_match	GNPTAB	ENST00000299314.11	5701	21	68	708	-27	-708	multi-exon	FALSE	canonical	1	236301	junction_20	58583.376665633565	NA	1	NA	TRUE	NA	NA	NA	C	coding	1256	3771	196	3966	10.0	-13	True	NA	NA
PB.2836.15	chr12	-	3969	19	novel_in_catalog	GNPTAB	novel	5701	21	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	27040	junction_1	81759.30537542635	NA	0	NA	TRUE	NA	NA	NA	C	coding	1179	3540	185	3724	25.0	-2	True	AATAAA	-17
PB.2836.16	chr12	-	2673	13	incomplete-splice_match	GNPTAB	ENST00000299314.11	5701	21	57	18953	-38	1311	3prime_fragment	FALSE	canonical	1	236301	junction_12	43023.713913488704	NA	2	NA	TRUE	NA	NA	NA	C	coding	822	2466	207	2672	55.0	-24	True	NA	NA
PB.2836.17	chr12	-	2571	11	novel_not_in_catalog	GNPTAB	novel	5701	21	NA	NA	-27	1384	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	123346.79565663633	NA	6	1	TRUE	NA	NA	NA	C	coding	709	2127	443	2569	70.0	-13	True	AAGAAA	-41
PB.1395.1	chr10	+	4640	31	full-splice_match	WASHC2C	ENST00000623400.3	4616	31	3	-27	3	2	multi-exon	FALSE	canonical	1	872	junction_5	112171.03566915123	NA	0	NA	TRUE	NA	NA	NA	C	coding	1341	4026	52	4077	20.0	1	True	NA	NA
PB.1395.3	chr10	+	4623	30	novel_in_catalog	WASHC2C	novel	4471	29	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	872	junction_5	112509.89340333149	NA	1	NA	TRUE	NA	NA	NA	C	coding	1317	3954	111	4064	20.0	-58	False	NA	NA
PB.2836.13	chr12	-	5486	20	novel_in_catalog	GNPTAB	novel	5701	21	NA	NA	-5	-9	no_combination_of_known_junctions	FALSE	canonical	1	2105	junction_1	85509.90534700816	NA	2	NA	TRUE	NA	NA	NA	C	coding	1201	3606	149	3754	15.0	34	True	CATAAA	-13
PB.12119.16	chrX	-	3142	9	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	735	junction_3	22779.416862803468	NA	10	2	TRUE	NA	NA	NA	C	coding	157	474	77	550	30.0	5	True	AATAAA	-14
PB.7487.1	chr21	-	4208	20	novel_not_in_catalog	SCAF4	novel	4193	20	NA	NA	-29	-2	any annotated donor/acceptor	FALSE	canonical	1	14446	junction_9	98918.85773462785	NA	1	NA	TRUE	NA	NA	NA	C	coding	1143	3432	413	3844	25.0	13	True	AATAAA	-17
PB.12119.14	chrX	-	3093	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-66	0	any annotated donor/acceptor	FALSE	canonical	1	13930	junction_1	16001.729298908776	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	124	744	30.0	158	False	AATAAA	-14
PB.12119.15	chrX	-	3085	5	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	1	4513	junction_2	13845.948313044506	NA	2	1	TRUE	NA	NA	NA	C	coding	175	528	96	623	30.0	-4	True	AATAAA	-14
PB.4086.13	chr15	-	5349	13	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-13	5	intron_retention	FALSE	canonical	1	469429	junction_12	121449.0512204775	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	199	1965	40.0	35	False	NA	NA
PB.8079.6	chr3	-	3220	20	novel_not_in_catalog	SCAP	novel	3749	22	NA	NA	-44	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	166485.72901330434	NA	1	1	TRUE	NA	NA	NA	C	coding	644	1935	300	2234	50.0	-63	False	ATTAAA	-8
PB.12119.12	chrX	-	3376	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-54	0	any annotated donor/acceptor	FALSE	canonical	1	15710	junction_2	12486.967909918458	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	462	914	30.0	170	False	AATAAA	-14
PB.12119.13	chrX	-	3181	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	9904	junction_2	17720.78379333149	NA	0	NA	TRUE	NA	NA	NA	C	coding	233	702	115	816	30.0	-39	True	AATAAA	-14
PB.12119.10	chrX	-	3476	7	full-splice_match	EDA2R	ENST00000451436.6	3464	7	-12	0	-12	0	multi-exon	FALSE	canonical	1	12617	junction_2	15735.752367882933	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	121	1014	30.0	-45	True	AATAAA	-14
PB.3269.9	chr13	+	3619	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-13	-192	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	0	NA	TRUE	NA	NA	NA	B	coding	759	2280	42	2321	30.0	-551	False	ATTAAA	-26
PB.3269.8	chr13	+	3175	19	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-15	-530	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	217952.3538950332	NA	0	NA	TRUE	NA	NA	NA	B	coding	723	2172	44	2215	10.0	-553	False	ATTAAA	-15
PB.3269.7	chr13	+	2608	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-3	313	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	8	NA	TRUE	NA	NA	NA	B	coding	759	2280	16	2295	35.0	0	True	ACTAAA	-34
PB.3269.6	chr13	+	3166	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-16	-648	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	0	NA	TRUE	NA	NA	NA	B	coding	759	2280	45	2324	20.0	-554	False	AATAAA	-23
PB.3269.5	chr13	+	3837	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	229566.7954541343	NA	2	NA	TRUE	NA	NA	NA	B	coding	735	2208	45	2252	40.0	-554	False	AATAAA	-14
PB.3269.4	chr13	+	3686	19	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	-3	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	217952.3538950332	NA	1	NA	TRUE	NA	NA	NA	B	coding	723	2172	16	2187	25.0	0	True	AATAAA	-24
PB.3269.3	chr13	+	3761	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	6	-31	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	1	NA	TRUE	NA	NA	NA	B	coding	759	2280	23	2302	60.0	-7	True	NA	NA
PB.3269.2	chr13	+	3497	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	3	-298	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	185637.22125506497	NA	0	NA	TRUE	NA	NA	NA	B	coding	759	2280	26	2305	30.0	-10	True	AATATA	-18
PB.3269.1	chr13	+	3914	20	novel_not_in_catalog	CUL4A	novel	4037	20	NA	NA	92	-31	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	224390.32542696403	NA	1	NA	TRUE	NA	NA	NA	B	coding	659	1980	476	2455	60.0	-1853	False	NA	NA
PB.9832.10	chr6	+	1153	7	novel_in_catalog	HLA-F	novel	1544	8	NA	NA	3	-35	combination_of_known_junctions	FALSE	canonical	1	37742	junction_4	467315.3791191234	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	35	1036	80.0	-4	True	CATAAA	-5
PB.11460.8	chr9	-	4233	11	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-72	-4775	any annotated donor/acceptor	FALSE	canonical	1	12801	junction_8	54535.87211084096	NA	9	NA	TRUE	NA	NA	NA	C	coding	111	336	999	1334	45.0	-1	True	TATAAA	-21
PB.8947.2	chr4	+	2314	1	novel_in_catalog	ANK2	novel	14196	46	NA	NA	8066	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-1233	False	AATAAA	-23
PB.10998.1	chr8	+	1943	1	genic	AC027117.2	novel	NA	NA	NA	NA	-1	-57783	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	0	True	GATAAA	-36
PB.11460.9	chr9	-	4414	11	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-60	-4775	any annotated donor/acceptor	FALSE	canonical	1	4092	junction_8	49720.15552107616	NA	3	NA	TRUE	NA	NA	NA	C	coding	265	798	497	1294	45.0	11	True	TATAAA	-21
PB.7591.1	chr22	+	3265	12	novel_not_in_catalog	IL17RA	novel	651	4	NA	NA	-15	-5358	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	78238.6808999147	NA	2	1	TRUE	NA	NA	NA	C	coding	524	1575	1176	2750	60.0	-94	False	NA	NA
PB.7591.3	chr22	+	2844	12	novel_not_in_catalog	IL17RA	novel	651	4	NA	NA	10	-5749	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	78238.6808999147	NA	2	1	TRUE	NA	NA	NA	C	coding	524	1575	1146	2720	30.0	-31	True	TTTAAA	-5
PB.7591.2	chr22	+	3411	12	novel_not_in_catalog	IL17RA	novel	651	4	NA	NA	1	-5196	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	78238.6808999147	NA	1	1	TRUE	NA	NA	NA	C	coding	524	1575	1160	2734	95.0	-45	True	NA	NA
PB.7591.4	chr22	+	2780	12	full-splice_match	IL17RA	ENST00000612619.1	8506	12	10	5716	10	-5715	multi-exon	FALSE	canonical	1	19814	junction_10	74016.5848332667	NA	1	NA	TRUE	NA	NA	NA	C	coding	832	2499	124	2622	15.0	-31	True	TTTAAA	-39
PB.8188.6	chr3	-	2027	9	full-splice_match	ARHGEF3	ENST00000495373.5	2024	9	-3	0	-3	0	multi-exon	FALSE	canonical	1	100911	junction_8	36086.934234394306	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	155	1405	40.0	-4	True	NA	NA
PB.8552.17	chr3	+	2291	9	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	13	-11	combination_of_known_junctions	FALSE	canonical	1	10716	junction_1	88096.26189536932	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	308	2110	50.0	-1118	False	AATAAA	-16
PB.8552.16	chr3	+	3830	9	novel_not_in_catalog	KLHL24	novel	2345	8	NA	NA	1	1466	any annotated donor/acceptor	FALSE	canonical	1	3131	junction_6	96755.44723812712	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	295	2172	20.0	1	True	AATAAA	-21
PB.4086.15	chr15	-	2427	14	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-26	5	combination_of_known_junctions	FALSE	canonical	1	46744	junction_1	212372.5865977363	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	147	1835	40.0	87	False	NA	NA
PB.8552.14	chr3	+	3619	9	full-splice_match	KLHL24	ENST00000454652.6	7380	9	0	3761	0	1238	multi-exon	FALSE	canonical	1	25453	junction_2	84653.14090451694	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	387	2189	45.0	0	True	AATAAA	-14
PB.8552.13	chr3	+	7280	8	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	0	37	combination_of_known_junctions	FALSE	canonical	1	14880	junction_1	75993.43103136196	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	250	2052	25.0	0	True	ATTAAA	-12
PB.8552.12	chr3	+	7315	8	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	0	37	no_combination_of_known_junctions	FALSE	canonical	1	3633	junction_1	79471.20191950422	NA	5	NA	TRUE	NA	NA	NA	C	coding	600	1803	285	2087	25.0	0	True	ATTAAA	-12
PB.8027.1	chr3	-	5145	5	full-splice_match	CSRNP1	ENST00000273153.9	3148	5	17	-2014	17	2014	multi-exon	TRUE	canonical	1	203042	junction_4	66255.34572206231	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	162	1931	25.0	2	True	ATTAAA	-24
PB.1389.1	chr10	-	1986	2	full-splice_match	DEPP1	ENST00000298295.3	2120	2	0	134	0	-134	multi-exon	FALSE	canonical	1	451591	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	212	639	219	857	25.0	-2	True	ATTAAA	-22
PB.2091.3	chr11	-	2013	13	full-splice_match	CTSF	ENST00000310325.9	2035	13	20	2	20	-1	multi-exon	FALSE	canonical	1	202849	junction_12	94876.07006727104	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	91	1545	30.0	-17	True	AATAAA	-18
PB.2091.2	chr11	-	2446	12	novel_in_catalog	CTSF	novel	2035	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	202849	junction_11	97585.65519337697	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	111	1517	25.0	9	True	AATAAA	-20
PB.2091.1	chr11	-	2970	10	full-splice_match	CTSF	ENST00000527141.5	1856	10	-1113	-1	-12	0	multi-exon	FALSE	canonical	1	466330	junction_3	33251.44204874411	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	1073	2041	25.0	-3	True	AATAAA	-20
PB.4582.1	chr16	+	1287	7	full-splice_match	WFDC1	ENST00000219454.9	1534	7	216	31	16	-20	multi-exon	FALSE	canonical	1	49453	junction_2	91344.30211506839	NA	0	NA	TRUE	NA	NA	NA	A	coding	220	663	111	773	70.0	-16	True	NA	NA
PB.8552.19	chr3	+	3188	9	full-splice_match	KLHL24	ENST00000454652.6	7380	9	11	4181	-1	818	multi-exon	FALSE	canonical	1	25453	junction_2	84653.14090451694	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	376	2178	75.0	11	True	NA	NA
PB.8552.18	chr3	+	7416	9	full-splice_match	KLHL24	ENST00000454652.6	7380	9	1	-37	1	37	multi-exon	FALSE	canonical	1	25453	junction_2	84653.14090451694	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	386	2188	25.0	1	True	ATTAAA	-12
PB.7487.2	chr21	-	4208	20	full-splice_match	SCAF4	ENST00000286835.11	4193	20	-18	3	-18	-3	multi-exon	FALSE	canonical	1	146965	junction_19	74630.70929164455	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	402	3845	30.0	24	True	AATAAA	-16
PB.8555.10	chr3	-	2366	6	novel_in_catalog	ABCC5	novel	5921	30	NA	NA	-7	0	intron_retention	FALSE	canonical	1	33524	junction_1	77215.38955570968	NA	3	NA	TRUE	NA	NA	NA	C	coding	208	627	150	776	20.0	9882	False	AATAAA	-17
PB.11460.1	chr9	-	4762	11	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-96	-4463	any annotated donor/acceptor	FALSE	canonical	1	4092	junction_8	49720.15552107616	NA	2	1	TRUE	NA	NA	NA	C	coding	265	798	533	1330	45.0	-25	True	AATAAA	-16
PB.11460.2	chr9	-	4680	11	novel_not_in_catalog	ZDHHC21	novel	9160	10	NA	NA	-25	-4463	any annotated donor/acceptor	FALSE	canonical	1	1343	junction_8	50248.67503377577	NA	2	NA	TRUE	NA	NA	NA	C	coding	265	798	451	1248	45.0	46	True	AATAAA	-16
PB.11867.2	chr9	-	3070	11	full-splice_match	TTF1	ENST00000334270.2	3052	11	-18	0	11	0	multi-exon	FALSE	canonical	1	31635	junction_10	47236.654396771155	NA	0	NA	TRUE	NA	NA	NA	C	coding	905	2718	59	2776	15.0	-7	True	AATAAA	-15
PB.470.13	chr1	+	3039	13	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	10	14	intron_retention	FALSE	canonical	1	64753	junction_2	634977.2927436231	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	945	1829	35.0	0	True	AATAAA	-28
PB.8235.1	chr3	-	2619	1	novel_in_catalog	RPL23AP49	novel	1138	3	NA	NA	11157	-31695	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	319	960	3	962	80.0	NA	False	NA	NA
PB.9792.1	chr6	-	1788	2	novel_in_catalog	AL031777.3	novel	1637	3	NA	NA	0	123	intron_retention	FALSE	canonical	1	23528	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	136	411	455	865	80.0	-1	True	NA	NA
PB.9516.1	chr5	+	3311	1	full-splice_match	PCDHB12	ENST00000239450.4	3853	1	0	542	0	470	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	795	2388	190	2577	25.0	0	True	AATAAA	-28
PB.9702.4	chr6	+	4243	6	novel_in_catalog	BPHL	novel	1186	8	NA	NA	-7	0	intron_retention	FALSE	canonical	1	104298	junction_1	59234.76027266422	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	23	769	85.0	-7	True	NA	NA
PB.9702.1	chr6	+	1370	7	full-splice_match	BPHL	ENST00000380379.9	1928	7	8	550	8	0	multi-exon	FALSE	canonical	1	104298	junction_1	54127.919920468645	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	42	917	85.0	-26	True	NA	NA
PB.8606.1	chr3	+	3155	1	full-splice_match	FAM43A	ENST00000329759.5	2494	1	-663	2	-663	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	423	1272	947	2218	30.0	-2	True	AATAAA	-17
PB.9702.3	chr6	+	1918	7	full-splice_match	BPHL	ENST00000380379.9	1928	7	22	-12	-12	12	multi-exon	FALSE	canonical	1	104298	junction_1	54127.919920468645	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	28	903	35.0	-12	True	AATAAA	-15
PB.9702.2	chr6	+	1594	8	full-splice_match	BPHL	ENST00000424847.6	1563	8	328	-359	12	0	multi-exon	FALSE	canonical	1	18328	junction_1	98637.51600104873	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	317	1141	85.0	-22	True	NA	NA
PB.9033.2	chr4	+	3641	21	incomplete-splice_match	TMEM131L	ENST00000409959.7	5017	35	-19	36672	-16	-3575	3prime_fragment	FALSE	canonical	1	123366	junction_6	56108.95281271965	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2292	69	2360	85.0	-30	True	NA	NA
PB.9033.3	chr4	+	4863	34	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	canonical	1	417	junction_1	116898.89952794599	NA	1	NA	TRUE	NA	NA	NA	C	coding	1275	3828	464	4291	15.0	-24	True	AATAAA	-11
PB.7911.17	chr3	-	2304	4	full-splice_match	OXTR	ENST00000316793.7	4364	4	136	1924	132	-1924	multi-exon	FALSE	canonical	1	62909	junction_2	28391.733425222363	NA	2	NA	TRUE	NA	NA	NA	C	coding	389	1170	490	1659	65.0	1	True	NA	NA
PB.387.5	chr1	-	3148	9	novel_in_catalog	LRRC41	novel	892	7	NA	NA	33	0	intron_retention	FALSE	canonical	1	283664	junction_8	188391.10529423723	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	12	2204	20.0	15	True	AATAAA	-16
PB.1369.12	chr10	-	2457	6	full-splice_match	ZNF248	ENST00000395867.7	5141	6	-16	2700	10	-609	multi-exon	FALSE	canonical	1	39558	junction_5	45712.847934032725	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	568	2307	40.0	-17	True	ATTAAA	-13
PB.9033.7	chr4	+	4765	33	novel_in_catalog	TMEM131L	novel	5017	35	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	6273	junction_16	112457.76213226402	NA	0	NA	TRUE	NA	NA	NA	C	coding	1526	4581	53	4633	15.0	-14	True	AATAAA	-11
PB.1369.10	chr10	-	2669	6	full-splice_match	ZNF248	ENST00000395867.7	5141	6	-18	2490	8	-399	multi-exon	FALSE	canonical	1	39558	junction_5	45712.847934032725	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	570	2309	15.0	-19	True	ATTAAA	-16
PB.9033.5	chr4	+	5076	36	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	canonical	1	7040	junction_31	116540.57688238191	NA	0	NA	TRUE	NA	NA	NA	C	coding	1629	4890	56	4945	15.0	-17	True	AATAAA	-10
PB.5634.6	chr19	+	3895	17	full-splice_match	UHRF1	ENST00000616255.1	2661	17	-35	-1199	-27	0	multi-exon	FALSE	canonical	1	90	junction_14	154405.05267000606	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	166	2547	15.0	166	False	AATAAA	-15
PB.5634.5	chr19	+	3639	16	full-splice_match	UHRF1	ENST00000622802.4	3230	16	610	-1019	602	0	multi-exon	FALSE	canonical	1	90	junction_13	156576.0130994102	NA	10	NA	TRUE	NA	NA	NA	C	coding	742	2229	63	2291	15.0	803	False	AATAAA	-15
PB.5634.4	chr19	+	3854	17	full-splice_match	UHRF1	ENST00000615884.4	2651	17	-11	-1192	-11	-1	multi-exon	FALSE	canonical	1	90	junction_14	152164.98450262332	NA	4	NA	TRUE	NA	NA	NA	C	coding	793	2382	123	2504	15.0	-9	True	AATAAA	-17
PB.5634.3	chr19	+	3732	16	novel_in_catalog	UHRF1	novel	4309	17	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	90	junction_13	152061.39080682732	NA	2	NA	TRUE	NA	NA	NA	C	coding	742	2229	156	2384	15.0	0	True	AATAAA	-15
PB.5634.2	chr19	+	4193	17	full-splice_match	UHRF1	ENST00000624301.3	3898	17	3	-298	3	295	multi-exon	FALSE	canonical	1	90	junction_14	151784.64821540748	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	166	2547	25.0	0	True	NA	NA
PB.4086.17	chr15	-	4976	14	novel_in_catalog	PRC1	novel	3034	15	NA	NA	-31	5	intron_retention	FALSE	canonical	1	169718	junction_1	185867.06889484788	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	152	2032	40.0	82	False	NA	NA
PB.470.16	chr1	+	4976	12	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-10	-70	intron_retention	FALSE	canonical	1	358272	junction_2	537780.657967217	NA	5	NA	TRUE	NA	NA	NA	C	coding	245	735	4242	4976	75.0	6	True	NA	NA
PB.8005.18	chr3	-	3267	2	full-splice_match	CLASP2	ENST00000486796.1	656	2	0	-2611	0	2611	multi-exon	FALSE	canonical	1	51405	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	85	258	119	376	90.0	-1	True	NA	NA
PB.8005.19	chr3	-	2814	7	novel_not_in_catalog	CLASP2	novel	6978	39	NA	NA	-43	1294	any annotated donor/acceptor	FALSE	canonical	1	4544	junction_1	66714.5153987413	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	255	1004	15.0	-17	True	NA	NA
PB.7585.2	chr22	-	3628	4	intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	8	NA	FALSE	NA	NA	NA	A	coding	101	306	63	368	35.0	NA	False	AATAAA	-21
PB.7585.3	chr22	-	1820	5	intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	22	2	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.8005.16	chr3	-	3242	25	novel_not_in_catalog	CLASP2	novel	6978	39	NA	NA	-42	4347	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	81024.61644976542	NA	2	2	TRUE	NA	NA	NA	C	coding	940	2823	254	3076	30.0	-16	True	AATAAA	-13
PB.7585.1	chr22	-	3492	3	intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-22
PB.7585.6	chr22	-	4172	3	intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	133	402	50	451	40.0	NA	False	AATAAA	-23
PB.8005.11	chr3	-	5631	38	novel_in_catalog	CLASP2	novel	6273	2	NA	NA	-34	-8	combination_of_known_junctions	FALSE	canonical	1	10464	junction_18	111709.42685291023	NA	3	1	TRUE	NA	NA	NA	C	coding	1505	4518	246	4763	50.0	-8	True	AATAAA	-20
PB.7585.4	chr22	-	3190	4	intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	A	coding	101	306	29	334	45.0	NA	False	AATAAA	-23
PB.7585.5	chr22	-	2635	4	intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	FALSE	NA	NA	NA	A	coding	79	240	75	314	40.0	NA	False	AATAAA	-22
PB.2830.13	chr12	+	3990	9	novel_in_catalog	SCYL2	novel	2328	17	NA	NA	1530	1	combination_of_known_junctions	FALSE	canonical	1	5613	junction_1	86491.3033914935	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	97	1437	25.0	NA	False	AATAAA	-28
PB.2830.10	chr12	+	5003	18	full-splice_match	SCYL2	ENST00000360820.6	5779	18	1	775	1	-775	multi-exon	FALSE	canonical	1	32232	junction_5	90063.55593502236	NA	0	NA	TRUE	NA	NA	NA	C	coding	929	2790	437	3226	35.0	-8	True	AATAAA	-27
PB.8108.7	chr3	-	5626	33	full-splice_match	LAMB2	ENST00000418109.5	5674	33	47	1	-15	0	multi-exon	FALSE	canonical	1	88232	junction_32	225938.69750501937	NA	1	NA	TRUE	NA	NA	NA	A	coding	1798	5397	119	5515	10.0	22	False	AATAAA	-16
PB.12136.1	chrX	-	1615	2	full-splice_match	CXCR3	ENST00000373693.3	1624	2	2	7	2	-7	multi-exon	FALSE	canonical	1	43834	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	368	1107	67	1173	20.0	-5	True	AATAAA	-11
PB.502.9	chr1	-	2395	13	full-splice_match	SSX2IP	ENST00000605755.5	1933	13	-17	-445	7	408	multi-exon	FALSE	canonical	1	18548	junction_12	73824.05146472705	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	130	1893	35.0	-1	True	AATAAA	-33
PB.3548.3	chr14	-	3412	12	full-splice_match	ELMSAN1	ENST00000394071.6	7721	12	50	4259	50	1	multi-exon	FALSE	canonical	1	42288	junction_11	53029.47737355515	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3057	355	3411	70.0	-1	True	NA	NA
PB.11784.3	chr9	-	458	4	full-splice_match	RPL35	ENST00000348462.5	455	4	-4	1	-4	-1	multi-exon	FALSE	canonical	1	5575891	junction_1	1763599.438564274	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	54	425	10.0	-9	True	AATAAA	-15
PB.470.18	chr1	+	3918	12	incomplete-splice_match	SRSF11	ENST00000370951.5	2385	13	15731	-1430	17	-5	5prime_fragment	FALSE	canonical	1	634180	junction_2	523693.3416773346	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	369	1676	30.0	2	True	AATAAA	-16
PB.9297.2	chr5	+	3826	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	72	687	-6	-6	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	85	2751	30.0	19	True	AATAAA	-20
PB.3548.2	chr14	-	3847	12	full-splice_match	ELMSAN1	ENST00000435371.1	3839	12	-4	-4	-4	3	multi-exon	FALSE	canonical	1	103817	junction_11	38406.96831918753	NA	0	NA	TRUE	NA	NA	NA	C	coding	1020	3060	788	3847	70.0	-26	True	NA	NA
PB.8164.16	chr3	-	2079	9	full-splice_match	WDR82	ENST00000296490.7	4293	9	268	1946	-54	-1407	multi-exon	FALSE	canonical	1	86085	junction_6	139857.95406031614	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	15	956	20.0	13	True	AATACA	-22
PB.8164.14	chr3	-	3238	9	full-splice_match	WDR82	ENST00000296490.7	4293	9	354	701	32	-162	multi-exon	FALSE	canonical	1	86085	junction_6	139857.95406031614	NA	3	NA	TRUE	NA	NA	NA	C	coding	199	600	271	870	55.0	9730	False	NA	NA
PB.8164.15	chr3	-	2990	9	full-splice_match	WDR82	ENST00000296490.7	4293	9	105	1198	105	-659	multi-exon	FALSE	canonical	1	86085	junction_6	139857.95406031614	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	178	1119	25.0	9481	False	NA	NA
PB.502.5	chr1	-	3488	15	novel_in_catalog	SSX2IP	novel	5843	13	NA	NA	-21	1291	no_combination_of_known_junctions	FALSE	canonical	1	7273	junction_14	91085.71550840764	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	259	2103	75.0	-29	True	TTTAAA	-12
PB.3548.1	chr14	-	6204	13	novel_in_catalog	ELMSAN1	novel	7721	12	NA	NA	4	-1587	combination_of_known_junctions	FALSE	canonical	1	103817	junction_12	36944.09547198382	NA	1	NA	TRUE	NA	NA	NA	C	coding	1099	3300	780	4079	40.0	-18	True	NA	NA
PB.502.7	chr1	-	3318	13	full-splice_match	SSX2IP	ENST00000605755.5	1933	13	-57	-1328	-33	1291	multi-exon	FALSE	canonical	1	18548	junction_12	73824.05146472705	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	170	1933	75.0	243	False	TTTAAA	-12
PB.502.6	chr1	-	3359	14	full-splice_match	SSX2IP	ENST00000342203.7	5835	14	135	2341	34	1291	multi-exon	FALSE	canonical	1	45395	junction_13	68828.68871610658	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	130	1974	75.0	50	True	TTTAAA	-12
PB.3487.1	chr14	+	3328	5	full-splice_match	RHOJ	ENST00000316754.7	3302	5	-13	-13	-13	13	multi-exon	FALSE	canonical	1	78770	junction_4	47136.887515909446	NA	3	NA	TRUE	NA	NA	NA	C	coding	214	645	476	1120	25.0	1	True	AATAAA	-31
PB.6477.23	chr2	-	3244	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	1	379	intron_retention	FALSE	canonical	1	59518	junction_19	60840.08155075132	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	19	1860	50.0	-7	True	ATTAAA	-22
PB.3487.3	chr14	+	3006	5	full-splice_match	RHOJ	ENST00000316754.7	3302	5	24	272	24	-272	multi-exon	FALSE	canonical	1	78770	junction_4	47136.887515909446	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	439	1083	90.0	-462	False	NA	NA
PB.3487.2	chr14	+	3354	6	novel_not_in_catalog	RHOJ	novel	1837	5	NA	NA	14	-1	intron_retention	FALSE	canonical	1	8386	junction_5	78948.74868926044	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	449	979	20.0	-472	False	AATAAA	-17
PB.3487.5	chr14	+	2833	5	full-splice_match	RHOJ	ENST00000316754.7	3302	5	39	430	39	-430	multi-exon	FALSE	canonical	1	78770	junction_4	47136.887515909446	NA	4	NA	TRUE	NA	NA	NA	C	coding	214	645	424	1068	60.0	4	True	NA	NA
PB.3487.4	chr14	+	3059	6	novel_not_in_catalog	RHOJ	novel	1837	5	NA	NA	38	-272	intron_retention	FALSE	canonical	1	8386	junction_5	78948.74868926044	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	425	955	90.0	3	True	NA	NA
PB.6477.24	chr2	-	2659	29	novel_not_in_catalog	PNPT1	novel	4411	28	NA	NA	5	379	any annotated donor/acceptor	FALSE	canonical	1	3257	junction_10	79265.58998589	NA	2	NA	TRUE	NA	NA	NA	C	coding	504	1515	15	1529	50.0	-3	True	ATTAAA	-22
PB.6477.25	chr2	-	2518	27	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	2	379	no_combination_of_known_junctions	FALSE	canonical	1	2354	junction_16	74614.37903058513	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	1046	2272	50.0	-6	True	ATTAAA	-22
PB.6477.28	chr2	-	2500	28	full-splice_match	PNPT1	ENST00000447944.6	4411	28	68	1843	0	262	multi-exon	FALSE	canonical	1	59518	junction_20	60395.91473082297	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2352	20	2371	35.0	-8	True	TATAAA	-22
PB.6477.29	chr2	-	2358	26	novel_in_catalog	PNPT1	novel	4411	28	NA	NA	7	263	combination_of_known_junctions	FALSE	canonical	1	4237	junction_25	73910.58062334513	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	501	2228	30.0	-1	True	TATAAA	-23
PB.5913.4	chr19	+	5773	14	full-splice_match	KIAA0355	ENST00000299505.6	6717	14	29	915	14	-915	multi-exon	FALSE	canonical	1	68097	junction_1	36977.8825962463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1070	3213	845	4057	85.0	0	True	NA	NA
PB.4212.4	chr16	-	2811	15	novel_not_in_catalog	TRAP1	novel	785	4	NA	NA	-13	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	516546.5841741128	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	1235	2722	5.0	-16	True	TTTAAA	-15
PB.4212.5	chr16	-	2322	18	novel_in_catalog	TRAP1	novel	785	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	11464	junction_10	458079.30492873513	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	1019	2233	5.0	0	True	TTTAAA	-15
PB.9778.4	chr6	+	3572	10	full-splice_match	ALDH5A1	ENST00000357578.7	5248	10	117	1559	0	1345	multi-exon	FALSE	canonical	1	84370	junction_1	51810.77487488295	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	29	1636	75.0	0	True	NA	NA
PB.9778.5	chr6	+	5283	11	full-splice_match	ALDH5A1	ENST00000348925.2	2266	11	-115	-2902	2	-2	multi-exon	FALSE	canonical	1	12280	junction_4	73861.4195967015	NA	4	NA	TRUE	NA	NA	NA	C	coding	548	1647	144	1790	15.0	1	True	AATAAA	-30
PB.9778.2	chr6	+	3074	10	full-splice_match	ALDH5A1	ENST00000357578.7	5248	10	-53	2227	-53	677	multi-exon	FALSE	canonical	1	84370	junction_1	51810.77487488295	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	199	1806	55.0	1	True	NA	NA
PB.4212.1	chr16	-	2258	18	full-splice_match	TRAP1	ENST00000246957.9	2296	18	37	1	-7	0	multi-exon	FALSE	canonical	1	477309	junction_17	338715.8344319531	NA	8	NA	TRUE	NA	NA	NA	C	coding	704	2115	53	2167	5.0	1	True	TTTAAA	-17
PB.4212.2	chr16	-	2098	17	novel_not_in_catalog	TRAP1	novel	785	4	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	485136.5848912906	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	28	2007	5.0	-12	True	TTTAAA	-17
PB.4212.3	chr16	-	2115	17	novel_in_catalog	TRAP1	novel	785	4	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	1	9700	junction_8	477767.7995744736	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	32	1105	5.0	-16	True	TTTAAA	-16
PB.8319.6	chr3	+	2267	5	incomplete-splice_match	TIMMDC1	ENST00000494664.5	2394	7	20	9882	0	1489	3prime_fragment	FALSE	canonical	1	704621	junction_1	91643.53011635628	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	183	782	90.0	2	True	NA	NA
PB.5440.1	chr18	-	3642	8	incomplete-splice_match	KLHL14	ENST00000359358.8	4312	9	2697	5	1802	-5	5prime_fragment	FALSE	canonical	1	11352	junction_7	3501.5068767836606	NA	2	NA	TRUE	NA	NA	NA	A	coding	408	1227	435	1661	30.0	2793	False	AATAAA	-13
PB.8319.4	chr3	+	3125	1	novel_in_catalog	TIMMDC1	novel	2394	7	NA	NA	0	-12048	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-3	True	NA	NA
PB.8319.5	chr3	+	5798	5	novel_in_catalog	TIMMDC1	novel	2394	7	NA	NA	-1	9	intron_retention	FALSE	canonical	1	898525	junction_2	121777.44926375942	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1	True	AATAAA	-30
PB.8319.2	chr3	+	6123	4	novel_in_catalog	TIMMDC1	novel	2394	7	NA	NA	0	2	intron_retention	FALSE	canonical	1	898525	junction_1	126827.15189404656	NA	5	NA	TRUE	NA	NA	NA	C	coding	152	459	5358	5816	35.0	-3	True	AATAAA	-18
PB.8319.3	chr3	+	3032	5	novel_in_catalog	TIMMDC1	novel	2394	7	NA	NA	0	-6	intron_retention	FALSE	canonical	1	7682	junction_3	447370.4107428066	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-3	True	AATAAA	-10
PB.9778.8	chr6	+	1776	11	full-splice_match	ALDH5A1	ENST00000348925.2	2266	11	1	489	1	6	multi-exon	FALSE	canonical	1	12280	junction_4	73861.4195967015	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	28	1674	35.0	1	True	AATAAA	-23
PB.9778.9	chr6	+	1736	10	full-splice_match	ALDH5A1	ENST00000357578.7	5248	10	118	3394	1	5	multi-exon	FALSE	canonical	1	84370	junction_1	51810.77487488295	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	28	1635	30.0	1	True	AATAAA	-22
PB.3469.11	chr14	+	1620	13	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	-2	11376	combination_of_known_junctions	FALSE	canonical	1	12732	junction_1	27182.620472335915	NA	0	NA	TRUE	NA	NA	NA	B	coding	475	1425	195	1619	55.0	-8	True	NA	NA
PB.3469.10	chr14	+	5761	29	novel_not_in_catalog	KIAA0586	novel	5226	34	NA	NA	-2	-5384	any annotated donor/acceptor	FALSE	canonical	1	5625	junction_28	37763.57309839951	NA	1	NA	TRUE	NA	NA	NA	B	coding	1325	3978	195	4172	15.0	-8	True	AATAAA	-17
PB.4899.7	chr17	-	5570	23	novel_not_in_catalog	MYO1D	novel	5563	22	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	1209	junction_22	85646.58674803592	NA	2	NA	TRUE	NA	NA	NA	C	coding	891	2676	747	3422	20.0	-52	True	AATAAA	-12
PB.3830.8	chr15	+	3024	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	384	3420	-4	-329	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	180	1580	35.0	-11	True	ATTAAA	-14
PB.10401.12	chr7	+	2945	11	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-29	5	combination_of_known_junctions	FALSE	canonical	1	18699	junction_1	96374.0187718661	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	182	2809	20.0	48	True	AATAAA	-19
PB.3469.14	chr14	+	5708	30	novel_in_catalog	KIAA0586	novel	5226	34	NA	NA	2	1071	combination_of_known_junctions	FALSE	canonical	1	8224	junction_29	32757.30572515064	NA	0	NA	TRUE	NA	NA	NA	B	coding	1392	4179	185	4363	40.0	2	True	AATAAA	-17
PB.4899.3	chr17	-	5450	22	full-splice_match	MYO1D	ENST00000318217.9	5563	22	25	88	-8	-1	multi-exon	FALSE	canonical	1	178889	junction_21	46477.88838755463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1006	3021	281	3301	20.0	-29	True	AATAAA	-13
PB.10401.11	chr7	+	2948	12	full-splice_match	MIOS	ENST00000405785.5	3095	12	151	-4	-27	4	multi-exon	FALSE	canonical	1	21293	junction_1	98194.29709442279	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	186	2813	20.0	-11	True	AATAAA	-18
PB.3830.3	chr15	+	4088	14	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	-13	232	combination_of_known_junctions	FALSE	canonical	1	1369	junction_2	88835.89372059074	NA	2	NA	TRUE	NA	NA	NA	C	coding	352	1059	1025	2083	35.0	5	True	AATAAA	-20
PB.3830.2	chr15	+	3359	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	378	3091	-10	0	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	186	1586	60.0	-17	True	NA	NA
PB.3830.1	chr15	+	3573	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	395	2860	7	231	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	169	1569	30.0	0	True	AATAAA	-19
PB.936.3	chr1	-	1451	2	novel_not_in_catalog	PIGC	novel	1661	5	NA	NA	1	-18	any annotated donor/acceptor	TRUE	canonical	1	3551	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	304	1197	60.0	9	True	NA	NA
PB.4899.9	chr17	-	3546	22	full-splice_match	MYO1D	ENST00000579584.5	3500	22	-44	-2	-11	2	multi-exon	FALSE	canonical	1	13350	junction_1	69314.13363842436	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2886	317	3202	55.0	113	False	TTTAAA	-7
PB.4899.8	chr17	-	4062	22	novel_not_in_catalog	MYO1D	novel	5563	22	NA	NA	22	-44656	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	71458.69346486274	NA	27	1	TRUE	NA	NA	NA	C	coding	977	2934	251	3184	65.0	1	True	NA	NA
PB.3830.5	chr15	+	4544	13	novel_in_catalog	CTDSPL2	novel	6828	13	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	1	22291	junction_1	66047.50304573511	NA	5	NA	TRUE	NA	NA	NA	C	coding	466	1401	91	1491	35.0	-2	True	TATAAA	-25
PB.3830.4	chr15	+	6490	13	full-splice_match	CTDSPL2	ENST00000260327.8	6828	13	337	1	-51	-1	multi-exon	FALSE	canonical	1	105079	junction_8	51709.67514798098	NA	2	NA	TRUE	NA	NA	NA	C	coding	466	1401	227	1627	20.0	-243	False	NA	NA
PB.1711.5	chr10	+	6634	40	incomplete-splice_match	DOCK1	ENST00000280333.9	6797	52	43	45579	-4	-44527	3prime_fragment	FALSE	canonical	1	93585	junction_1	40847.98495697633	NA	24	3	TRUE	NA	NA	NA	C	coding	1359	4080	67	4146	25.0	0	True	ATTAAA	-16
PB.1711.4	chr10	+	3194	27	incomplete-splice_match	DOCK1	ENST00000280333.9	6797	52	25	324427	-22	-6	3prime_fragment	FALSE	canonical	1	93585	junction_1	42562.61704650729	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	85	2883	45.0	-18	True	AATAAA	-17
PB.1711.1	chr10	+	3878	32	incomplete-splice_match	DOCK1	ENST00000280333.9	6797	52	22	97219	22	10698	3prime_fragment	TRUE	canonical	1	93585	junction_1	42379.36494484069	NA	2	NA	TRUE	NA	NA	NA	C	coding	1075	3228	88	3315	40.0	-21	True	AATAAA	-17
PB.1711.3	chr10	+	6775	52	full-splice_match	DOCK1	ENST00000280333.9	6797	52	25	-3	-22	3	multi-exon	FALSE	canonical	1	93585	junction_1	37345.55119097569	NA	1	NA	TRUE	NA	NA	NA	C	coding	1865	5598	85	5682	25.0	-18	True	AATAAA	-21
PB.1711.2	chr10	+	6828	52	full-splice_match	DOCK1	ENST00000623213.1	5761	52	-22	-1045	-22	-7	multi-exon	FALSE	canonical	1	44587	junction_11	42193.98958936126	NA	1	NA	TRUE	NA	NA	NA	C	coding	1886	5661	85	5745	40.0	-18	True	AATAAA	-11
PB.2747.1	chr12	-	1871	2	antisense	novelGene_RAP1B_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-8895	False	NA	NA
PB.9053.4	chr4	-	2168	6	novel_not_in_catalog	TMEM192	novel	10012	6	NA	NA	-6	16	any annotated donor/acceptor	FALSE	canonical	1	7415	junction_1	78070.10489399896	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	88	768	30.0	-1	True	ATTAAA	-43
PB.7511.3	chr21	+	1258	3	full-splice_match	CBR1	ENST00000290349.10	1293	3	35	0	35	0	multi-exon	FALSE	canonical	1	1077114	junction_2	173928.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	141	974	25.0	-48	True	AATAAA	-19
PB.2747.2	chr12	-	1518	1	antisense	novelGene_RAP1B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	110	333	899	1231	100.0	-8895	False	NA	NA
PB.7511.5	chr21	+	2406	2	full-splice_match	CBR1	ENST00000439427.2	1024	2	9	-1391	9	-192	multi-exon	FALSE	canonical	1	1424971	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	93	629	55.0	0	True	CATAAA	-12
PB.7511.4	chr21	+	2640	2	full-splice_match	CBR1	ENST00000439427.2	1024	2	-34	-1582	-34	-1	multi-exon	FALSE	canonical	1	1424971	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	136	672	25.0	-43	True	AATAAA	-18
PB.9053.5	chr4	-	1755	6	full-splice_match	TMEM192	ENST00000306480.10	10012	6	57	8200	-8	-388	multi-exon	FALSE	canonical	1	152292	junction_5	35690.43925423166	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	90	905	90.0	-3	True	NA	NA
PB.8713.3	chr4	-	3367	6	novel_in_catalog	LCORL	novel	10430	8	NA	NA	0	-1341	combination_of_known_junctions	FALSE	canonical	1	32034	junction_1	35122.62253534038	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	5	700	25.0	-1	True	AATAAA	-16
PB.11780.28	chr9	+	2566	10	full-splice_match	NEK6	ENST00000546191.5	2580	10	13	1	5	-1	multi-exon	FALSE	canonical	1	11400	junction_1	225264.3311414776	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	135	1076	30.0	-5	True	AATAAA	-40
PB.9053.6	chr4	-	1784	7	novel_in_catalog	TMEM192	novel	10012	6	NA	NA	-6	-388	combination_of_known_junctions	FALSE	canonical	1	17887	junction_6	94011.08817935608	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	542	934	90.0	-1	True	NA	NA
PB.11625.62	chr9	-	2034	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	206	1594	10.0	-2	True	AATAAA	-13
PB.8713.4	chr4	-	5914	8	full-splice_match	LCORL	ENST00000635767.1	10430	8	125	4391	4	50	multi-exon	FALSE	canonical	1	8685	junction_2	44163.869073610615	NA	1	NA	TRUE	NA	NA	NA	C	coding	1871	5616	1	5616	25.0	3	True	ATTAAA	-16
PB.11625.60	chr9	-	2114	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-18	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	2	1	TRUE	NA	NA	NA	B	coding	458	1377	240	1616	5.0	-36	True	AATAAA	-14
PB.9053.7	chr4	-	1615	6	full-splice_match	TMEM192	ENST00000306480.10	10012	6	32	8365	32	-553	multi-exon	FALSE	canonical	1	152292	junction_5	35690.43925423166	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	115	930	75.0	0	True	NA	NA
PB.1723.2	chr10	+	3929	2	incomplete-splice_match	ZNF511	ENST00000359035.4	2004	5	-6	6	-6	-2	intron_retention	FALSE	canonical	1	272987	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	445	795	15.0	21	True	TTTAAA	-22
PB.11625.67	chr9	-	2517	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_3	681068.889475022	NA	4	1	TRUE	NA	NA	NA	B	coding	437	1314	707	2020	10.0	-17	True	AATAAA	-13
PB.11625.64	chr9	-	1996	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	915001.7304850483	NA	9	3	TRUE	NA	NA	NA	B	coding	221	666	890	1555	5.0	-14	True	AATAAA	-14
PB.1723.1	chr10	+	2053	5	full-splice_match	ZNF511	ENST00000359035.4	2004	5	-49	0	-49	0	multi-exon	FALSE	canonical	1	272987	junction_1	164503.6044139687	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	53	841	10.0	-22	True	TTTAAA	-28
PB.3497.8	chr14	+	2608	3	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	131	53	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	81689.5	NA	1	1	TRUE	NA	NA	NA	C	coding	713	2142	162	2303	35.0	-654	False	ATTAAA	-16
PB.3497.9	chr14	+	3917	3	full-splice_match	ZBTB1	ENST00000358738.3	4119	3	196	6	44	-6	multi-exon	FALSE	canonical	1	43087	junction_2	60146.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	196	2130	40.0	0	True	AATAAA	-20
PB.465.13	chr1	-	5175	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	-1	-1692	-1	-1536	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	88	1314	75.0	30	False	NA	NA
PB.3497.2	chr14	+	3333	2	incomplete-splice_match	ZBTB1	ENST00000358738.3	4119	3	197	9047	45	745	3prime_fragment	FALSE	canonical	1	163379	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	195	2336	35.0	1	True	AATAAA	-18
PB.3497.3	chr14	+	2923	3	novel_in_catalog	ZBTB1	novel	453	2	NA	NA	67	53	no_combination_of_known_junctions	FALSE	canonical	1	10478	junction_1	27530.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	477	2618	35.0	-129	False	ATTAAA	-16
PB.3497.1	chr14	+	3129	5	novel_in_catalog	ZBTB1	novel	453	2	NA	NA	-64	54	combination_of_known_junctions	FALSE	canonical	1	1956	junction_1	24213.27463913132	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	682	2823	35.0	0	True	ATTAAA	-17
PB.3497.6	chr14	+	2883	4	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	119	53	any annotated donor/acceptor	FALSE	canonical	1	291	junction_1	28659.97902224556	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	437	2578	35.0	-666	False	ATTAAA	-16
PB.3497.7	chr14	+	2876	4	novel_not_in_catalog	ZBTB1	novel	453	2	NA	NA	119	62	any annotated donor/acceptor	FALSE	canonical	1	291	junction_1	5009.809333253667	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	421	2562	25.0	-666	False	ATTAAA	-25
PB.3497.4	chr14	+	3682	2	incomplete-splice_match	ZBTB1	ENST00000358738.3	4119	3	154	8741	2	1051	3prime_fragment	FALSE	canonical	1	163379	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	238	2379	30.0	2	True	AATAAA	-17
PB.3497.5	chr14	+	2617	2	incomplete-splice_match	ZBTB1	ENST00000358738.3	4119	3	222	9738	70	54	3prime_fragment	FALSE	canonical	1	163379	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	713	2142	170	2311	35.0	26	True	ATTAAA	-17
PB.6937.8	chr2	+	3199	12	full-splice_match	BZW1	ENST00000409600.5	6875	12	357	3319	-7	781	multi-exon	FALSE	canonical	1	396	junction_10	886544.858005029	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	99	1358	20.0	-7	True	NA	NA
PB.681.1	chr1	+	1900	1	genic	GNRHR2	novel	NA	NA	NA	NA	-1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-15
PB.3905.2	chr15	-	1373	13	full-splice_match	ANXA2	ENST00000451270.6	1435	13	54	8	-1	2	multi-exon	FALSE	canonical	1	3552	junction_4	2262560.432699601	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	59	1078	25.0	-4	True	AATAAA	-18
PB.3905.3	chr15	-	3074	12	novel_in_catalog	ANXA2	novel	1676	14	NA	NA	0	2	intron_retention	FALSE	canonical	1	3552	junction_4	2338154.6331671285	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	55	708	25.0	0	True	AATAAA	-18
PB.3905.1	chr15	-	1533	13	full-splice_match	ANXA2	ENST00000451270.6	1435	13	57	-155	0	-38	multi-exon	FALSE	canonical	1	3552	junction_4	2262560.432699601	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	56	1075	75.0	-1	True	NA	NA
PB.3905.4	chr15	-	1449	14	full-splice_match	ANXA2	ENST00000421017.6	1444	14	0	-5	0	0	multi-exon	FALSE	canonical	1	3552	junction_4	2132595.862224721	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	137	1156	30.0	-1	True	AATAAA	-16
PB.884.7	chr1	+	2586	17	novel_not_in_catalog	ATF6	novel	7496	16	NA	NA	5	-5002	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	178966.93790400052	NA	16	1	TRUE	NA	NA	NA	C	coding	648	1947	63	2009	30.0	8	True	CATAAA	-27
PB.1618.1	chr10	-	2937	1	antisense	novelGene_NFKB2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	103	312	438	749	70.0	-10	True	NA	NA
PB.10809.4	chr7	+	8109	29	novel_in_catalog	PTPRZ1	novel	8175	30	NA	NA	-29	-2	intron_retention	FALSE	canonical	1	60682	junction_15	91841.0929539691	NA	3	NA	TRUE	NA	NA	NA	C	coding	2308	6927	369	7295	15.0	0	True	AATAAA	-17
PB.6094.9	chr19	+	4825	4	novel_in_catalog	CALM3	novel	702	6	NA	NA	8	0	intron_retention	FALSE	canonical	1	3952715	junction_1	1282618.0970063622	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	1771	2124	5.0	8	True	AATAAA	-17
PB.465.18	chr1	-	4066	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-16	-2429	-2	600	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	2	NA	TRUE	NA	NA	NA	C	coding	402	1209	89	1297	30.0	29	False	AATAAA	-13
PB.10545.1	chr7	-	4146	4	novel_not_in_catalog	LINC01446	novel	3484	6	NA	NA	-9	-107173	intron_retention	FALSE	canonical	1	819	junction_3	928.6701363897852	NA	3	NA	TRUE	NA	NA	NA	A	coding	145	438	18	455	80.0	-1	True	NA	NA
PB.884.3	chr1	+	2869	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	63	4564	63	-4564	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	35	2017	65.0	1	True	NA	NA
PB.9096.5	chr4	-	1036	2	incomplete-splice_match	CFAP97	ENST00000458385.6	4852	5	7	30609	7	102	3prime_fragment	FALSE	canonical	1	105073	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	921	114	1034	70.0	-3	True	NA	NA
PB.9096.4	chr4	-	1024	2	incomplete-splice_match	CFAP97	ENST00000514798.1	2895	4	64	21343	1	7	3prime_fragment	FALSE	canonical	1	23391	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	828	197	1024	70.0	27	True	NA	NA
PB.884.1	chr1	+	3042	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	53	4401	53	-4401	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	45	2027	100.0	-9	False	NA	NA
PB.9096.1	chr4	-	2691	5	full-splice_match	CFAP97	ENST00000458385.6	4852	5	15	2146	15	-2146	multi-exon	FALSE	canonical	1	105073	junction_4	105355.639835986	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	106	1704	65.0	5	True	ACTAAA	-6
PB.9096.3	chr4	-	1919	5	full-splice_match	CFAP97	ENST00000458385.6	4852	5	43	2890	7	-2890	multi-exon	FALSE	canonical	1	105073	junction_4	105355.639835986	NA	2	NA	TRUE	NA	NA	NA	C	coding	532	1599	78	1676	25.0	33	True	AATAGA	-15
PB.6094.3	chr19	+	2172	5	novel_not_in_catalog	CALM3	novel	702	6	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_1	2883882.907160284	NA	5	1	TRUE	NA	NA	NA	C	coding	123	372	173	544	5.0	-13	True	AATAAA	-17
PB.3181.6	chr13	-	3972	13	novel_in_catalog	THSD1	novel	3050	4	NA	NA	-34263	-35955	intron_retention	FALSE	canonical	1	198741	junction_12	47459.98144306832	NA	2	NA	TRUE	NA	NA	NA	B	coding	356	1071	43	1113	35.0	-3	True	NA	NA
PB.3181.7	chr13	-	3807	13	novel_in_catalog	THSD1	novel	3050	4	NA	NA	-34257	-35955	no_combination_of_known_junctions	FALSE	canonical	1	16298	junction_4	104120.92286095368	NA	1	NA	TRUE	NA	NA	NA	B	coding	364	1095	37	1131	35.0	3	True	NA	NA
PB.3181.4	chr13	-	4387	13	novel_in_catalog	THSD1	novel	3050	4	NA	NA	-34234	-35511	intron_retention	FALSE	canonical	1	198741	junction_12	47459.98144306832	NA	0	NA	TRUE	NA	NA	NA	B	coding	356	1071	14	1084	40.0	26	True	NA	NA
PB.3181.5	chr13	-	3888	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-21	550	-15	2	multi-exon	FALSE	canonical	1	198741	junction_13	56169.73506515711	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	50	1210	25.0	-10	True	NA	NA
PB.3181.2	chr13	-	4276	13	novel_in_catalog	THSD1	novel	3050	4	NA	NA	-34273	-35503	no_combination_of_known_junctions	FALSE	canonical	1	16634	junction_3	104012.08404031584	NA	1	NA	TRUE	NA	NA	NA	B	coding	284	855	53	907	30.0	-13	True	NA	NA
PB.3181.1	chr13	-	4340	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-16	93	-10	-93	multi-exon	TRUE	canonical	1	198741	junction_13	56169.73506515711	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	45	1205	35.0	-5	True	NA	NA
PB.2444.1	chr12	-	3388	6	full-splice_match	C1RL	ENST00000266542.8	3394	6	5	1	5	-1	multi-exon	FALSE	canonical	1	152628	junction_3	12130.202850735845	NA	4	NA	TRUE	NA	NA	NA	C	coding	487	1464	89	1552	25.0	-55	True	NA	NA
PB.8001.11	chr3	-	1927	12	novel_in_catalog	GLB1	novel	2616	16	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	914	junction_11	177878.38746688195	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	60	1616	30.0	1	True	AATAAA	-11
PB.8001.12	chr3	-	2043	16	full-splice_match	GLB1	ENST00000307363.9	2616	16	74	499	-10	-378	multi-exon	FALSE	canonical	1	379958	junction_15	78274.40483722773	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1971	72	2042	45.0	-11	False	NA	NA
PB.2444.2	chr12	-	2871	6	full-splice_match	C1RL	ENST00000266542.8	3394	6	29	494	-6	-294	multi-exon	FALSE	canonical	1	152628	junction_3	12130.202850735845	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	65	1528	60.0	-31	True	AATAAA	-38
PB.8001.14	chr3	-	1863	10	incomplete-splice_match	GLB1	ENST00000399402.7	2512	16	48	48710	5	287	3prime_fragment	FALSE	canonical	1	71928	junction_9	171511.76466857427	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	85	1116	25.0	-4	True	AATAAA	-9
PB.8001.15	chr3	-	4715	2	novel_not_in_catalog	GLB1	novel	2616	16	NA	NA	8184	-14650	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	8537	False	AATAAA	-13
PB.8001.16	chr3	-	3998	2	novel_in_catalog	GLB1	novel	2616	16	NA	NA	1	-21494	no_combination_of_known_junctions	FALSE	canonical	1	4256	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	216	1577	5.0	3	True	AATAAA	-36
PB.3181.9	chr13	-	3678	14	full-splice_match	VPS36	ENST00000378060.8	4417	14	-30	769	-24	-217	multi-exon	FALSE	canonical	1	198741	junction_13	56169.73506515711	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	59	1219	15.0	-19	True	TATAAA	-15
PB.3407.9	chr14	-	4746	14	incomplete-splice_match	MIS18BP1	ENST00000310806.8	4777	17	215	5840	-10	1081	3prime_fragment	FALSE	canonical	1	81783	junction_13	61575.25706764647	NA	1	NA	TRUE	NA	NA	NA	C	coding	1051	3156	245	3400	75.0	-18	True	NA	NA
PB.3407.8	chr14	-	3427	16	novel_not_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-4	-14	any annotated donor/acceptor	FALSE	canonical	1	306	junction_13	80722.43650749564	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	260	3169	35.0	279	False	ATTAAA	-20
PB.7263.3	chr20	-	2095	13	full-splice_match	NFS1	ENST00000374092.8	3012	13	7	910	0	-1	multi-exon	FALSE	canonical	1	118490	junction_12	101565.85425955035	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	65	1438	20.0	-1	True	AATAAA	-16
PB.7263.2	chr20	-	1978	13	full-splice_match	NFS1	ENST00000397425.5	1956	13	-3	-19	0	0	multi-exon	FALSE	canonical	1	19929	junction_12	118536.48297567738	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	127	1320	20.0	-1	True	AATAAA	-17
PB.8480.3	chr3	+	2645	23	full-splice_match	MME	ENST00000460393.5	5622	23	2	2975	2	-5	multi-exon	FALSE	canonical	1	84043	junction_1	69494.44528762504	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	119	2371	20.0	-7	True	NA	NA
PB.8480.2	chr3	+	5695	23	full-splice_match	MME	ENST00000460393.5	5622	23	-84	11	-84	-11	multi-exon	FALSE	canonical	1	84043	junction_1	69494.44528762504	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	205	2457	25.0	2	True	AATAAA	-14
PB.8480.1	chr3	+	3082	23	full-splice_match	MME	ENST00000460393.5	5622	23	-93	2633	-93	226	multi-exon	TRUE	canonical	1	84043	junction_1	69494.44528762504	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	214	2466	5.0	-7	True	AATGAA	-14
PB.3407.1	chr14	-	4790	19	novel_not_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-4	-1	any annotated donor/acceptor	TRUE	canonical	1	2753	junction_17	96110.38863101926	NA	1	NA	TRUE	NA	NA	NA	C	coding	1132	3399	474	3872	5.0	279	False	AATAAA	-20
PB.3407.3	chr14	-	4911	17	full-splice_match	MIS18BP1	ENST00000310806.8	4777	17	-139	5	-1	-5	multi-exon	FALSE	canonical	1	81783	junction_16	56256.110245771306	NA	4	NA	TRUE	NA	NA	NA	C	coding	1132	3399	599	3997	10.0	-60	False	AATAAA	-16
PB.3407.2	chr14	-	4697	18	novel_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	1	23280	junction_17	80571.50334860751	NA	1	NA	TRUE	NA	NA	NA	C	coding	1132	3399	381	3779	5.0	4	True	AATAAA	-20
PB.3407.5	chr14	-	4385	19	novel_not_in_catalog	MIS18BP1	novel	4777	17	NA	NA	1	246	any annotated donor/acceptor	FALSE	canonical	1	2753	junction_17	96110.38863101926	NA	1	NA	TRUE	NA	NA	NA	C	coding	1132	3399	469	3867	10.0	284	False	ATTAAA	-10
PB.3407.4	chr14	-	4185	17	full-splice_match	MIS18BP1	ENST00000310806.8	4777	17	196	396	-8	251	multi-exon	FALSE	canonical	1	81783	junction_16	56256.110245771306	NA	1	NA	TRUE	NA	NA	NA	C	coding	1132	3399	264	3662	10.0	275	False	ATTAAA	-15
PB.3407.7	chr14	-	4023	18	novel_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-3	-14	combination_of_known_junctions	FALSE	canonical	1	23280	junction_17	80571.50334860751	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	367	3765	35.0	280	False	ATTAAA	-20
PB.3407.6	chr14	-	3923	17	full-splice_match	MIS18BP1	ENST00000310806.8	4777	17	202	652	-2	-5	multi-exon	FALSE	canonical	1	81783	junction_16	56256.110245771306	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	258	3656	25.0	281	False	ATTAAA	-29
PB.7332.6	chr20	-	956	2	full-splice_match	TP53RK	ENST00000372114.3	3515	2	279	2280	-60	-1111	multi-exon	FALSE	canonical	1	196202	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	87	848	20.0	-8	True	AGTAAA	-18
PB.5658.1	chr19	+	2893	27	full-splice_match	VAV1	ENST00000602142.5	2620	27	-16	-257	-4	0	multi-exon	FALSE	canonical	1	182275	junction_8	43924.725473457875	NA	0	NA	TRUE	NA	NA	NA	A	coding	845	2538	99	2636	25.0	-1	True	AATAAA	-18
PB.7332.4	chr20	-	2330	2	full-splice_match	TP53RK	ENST00000372102.3	2012	2	-10	-308	-10	308	multi-exon	FALSE	canonical	1	12332	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	429	803	15.0	-17	True	NA	NA
PB.7332.5	chr20	-	1944	2	full-splice_match	TP53RK	ENST00000372114.3	3515	2	331	1240	-8	-71	multi-exon	FALSE	canonical	1	196202	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	35	796	25.0	-15	True	TATAAA	-14
PB.7332.2	chr20	-	3189	2	full-splice_match	TP53RK	ENST00000372114.3	3515	2	325	1	-14	-1	multi-exon	FALSE	canonical	1	196202	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	41	802	10.0	-21	True	NA	NA
PB.8307.2	chr3	+	3547	17	novel_in_catalog	GRAMD1C	novel	2230	19	NA	NA	-1	2	no_combination_of_known_junctions	FALSE	canonical	1	4135	junction_13	10670.489414260423	NA	2	NA	TRUE	NA	NA	NA	C	coding	603	1812	38	1849	5.0	-16	True	AATAAA	-18
PB.8307.1	chr3	+	3780	18	full-splice_match	GRAMD1C	ENST00000358160.8	4177	18	402	-5	2	5	multi-exon	FALSE	canonical	1	16875	junction_6	7850.237590568435	NA	2	NA	TRUE	NA	NA	NA	C	coding	662	1989	91	2079	10.0	1	True	AATAAA	-21
PB.7332.1	chr20	-	5858	2	full-splice_match	TP53RK	ENST00000372114.3	3515	2	345	-2688	6	2688	multi-exon	FALSE	canonical	1	196202	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	21	782	25.0	-1	True	NA	NA
PB.884.9	chr1	+	2615	15	novel_not_in_catalog	ATF6	novel	7496	16	NA	NA	26	27872	any annotated donor/acceptor	FALSE	canonical	1	6423	junction_14	123530.64263295656	NA	2	NA	TRUE	NA	NA	NA	C	coding	573	1722	42	1763	60.0	0	True	AATAAA	-21
PB.7093.2	chr2	-	1496	12	full-splice_match	ILKAP	ENST00000254654.7	1490	12	-7	1	-7	0	multi-exon	FALSE	canonical	1	226092	junction_11	103384.6081500074	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	184	1362	20.0	-25	False	AATAAA	-22
PB.7093.3	chr2	-	3080	11	novel_in_catalog	ILKAP	novel	1490	12	NA	NA	5	0	intron_retention	FALSE	canonical	1	53934	junction_9	139305.63313667543	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	2129	2947	25.0	8	False	AATAAA	-21
PB.7093.1	chr2	-	3052	11	novel_in_catalog	ILKAP	novel	1490	12	NA	NA	0	1	intron_retention	FALSE	canonical	1	226092	junction_10	104446.96629850003	NA	1	NA	TRUE	NA	NA	NA	C	coding	272	819	2098	2916	20.0	-1	True	AATAAA	-24
PB.8127.3	chr3	+	2137	16	novel_in_catalog	RBM6	novel	2260	17	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	5933	junction_3	265703.928685997	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	343	2022	15.0	-13	True	AATAAA	-16
PB.6375.9	chr2	-	3948	20	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	1	4377	junction_19	153379.2969498886	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	277	3129	30.0	1	True	NA	NA
PB.8127.2	chr3	+	3503	18	incomplete-splice_match	RBM6	ENST00000443081.5	4010	21	7	8515	7	2291	3prime_fragment	TRUE	canonical	1	37186	junction_2	206508.25529425745	NA	1	NA	TRUE	NA	NA	NA	C	coding	863	2589	913	3501	30.0	4	True	GATAAA	-16
PB.7308.9	chr20	+	3109	7	full-splice_match	YWHAB	ENST00000372839.7	3109	7	-11	11	-2	-11	multi-exon	FALSE	canonical	1	192472	junction_1	1313707.8736621458	NA	4	NA	TRUE	NA	NA	NA	C	coding	244	735	292	1026	15.0	-17	True	AATAAA	-16
PB.3677.20	chr14	+	2050	3	novel_not_in_catalog	TRAF3	novel	7640	11	NA	NA	5	-36052	any annotated donor/acceptor	FALSE	canonical	1	1190	junction_2	42356.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	2	True	NA	NA
PB.9603.3	chr5	+	5746	3	novel_in_catalog	PTTG1	novel	753	6	NA	NA	0	-1	intron_retention	FALSE	canonical	1	917446	junction_2	136155.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	111	336	324	659	15.0	0	True	AATAAA	-15
PB.3677.22	chr14	+	2778	1	novel_in_catalog	TRAF3	novel	7640	11	NA	NA	21716	2873	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	115	348	2243	2590	100.0	NA	False	NA	NA
PB.7308.5	chr20	+	2960	6	full-splice_match	YWHAB	ENST00000353703.8	3049	6	32	57	-3	-57	multi-exon	FALSE	canonical	1	1649071	junction_1	644481.5878708716	NA	13	NA	TRUE	NA	NA	NA	C	coding	246	741	183	923	60.0	-9	True	TTTAAA	-34
PB.7308.4	chr20	+	4039	4	novel_in_catalog	YWHAB	novel	3049	6	NA	NA	10	0	intron_retention	FALSE	canonical	1	1649071	junction_1	666073.2686759518	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	205	648	100.0	-31	True	NA	NA
PB.7308.7	chr20	+	2042	7	full-splice_match	YWHAB	ENST00000372839.7	3109	7	-14	1081	-5	931	multi-exon	FALSE	canonical	1	192472	junction_1	1313707.8736621458	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	295	1029	85.0	-20	True	NA	NA
PB.7308.6	chr20	+	2747	7	full-splice_match	YWHAB	ENST00000372839.7	3109	7	-14	376	-5	-376	multi-exon	FALSE	canonical	1	192472	junction_1	1313707.8736621458	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	295	1029	90.0	-20	True	NA	NA
PB.7308.1	chr20	+	2639	6	full-splice_match	YWHAB	ENST00000353703.8	3049	6	34	376	-1	-376	multi-exon	FALSE	canonical	1	1649071	junction_1	644481.5878708716	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	181	921	90.0	-7	True	NA	NA
PB.7308.3	chr20	+	1000	6	full-splice_match	YWHAB	ENST00000353703.8	3049	6	21	2028	-5	0	multi-exon	FALSE	canonical	1	1649071	junction_1	644481.5878708716	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	194	934	100.0	-20	True	NA	NA
PB.7308.2	chr20	+	5185	2	incomplete-splice_match	YWHAB	ENST00000479421.5	1097	7	-26	16	0	0	intron_retention	FALSE	canonical	1	1649071	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	215	658	100.0	0	True	NA	NA
PB.11394.6	chr8	-	2170	1	novel_in_catalog	SHARPIN	novel	1765	9	NA	NA	-16	1039	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	115	348	20	367	90.0	-7	True	NA	NA
PB.11394.4	chr8	-	3287	1	genic	SHARPIN	novel	NA	NA	NA	NA	-620	1039	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	134	405	1575	1979	90.0	-1	True	NA	NA
PB.11394.5	chr8	-	2961	2	full-splice_match	SHARPIN	ENST00000531375.1	613	2	-1134	-1214	-621	1039	multi-exon	FALSE	canonical	1	346257	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	1138	1653	90.0	-2	True	NA	NA
PB.4728.2	chr17	-	1213	11	full-splice_match	GPS2	ENST00000380728.6	1379	11	168	-2	11	0	multi-exon	FALSE	canonical	1	172902	junction_10	224112.2145162106	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	134	1117	0.0	-78	False	AATAAA	-17
PB.11394.3	chr8	-	2357	9	novel_not_in_catalog	SHARPIN	novel	533	3	NA	NA	-616	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	320473.50278959784	NA	10	2	TRUE	NA	NA	NA	C	coding	310	933	1133	2065	25.0	3	True	ATTAAA	-15
PB.1739.1	chr11	-	675	2	full-splice_match	IFITM3	ENST00000399808.4	808	2	127	6	127	-6	multi-exon	FALSE	canonical	1	1883801	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	133	402	111	512	10.0	8569	False	AATAAA	-19
PB.4728.1	chr17	-	2059	6	novel_in_catalog	GPS2	novel	1238	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	34679	junction_5	205650.75260411765	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	639	1025	0.0	-26	True	AATAAA	-18
PB.11488.10	chr9	-	1500	6	full-splice_match	CAAP1	ENST00000333916.7	2791	6	-3	1294	-3	-243	multi-exon	FALSE	canonical	1	124126	junction_5	73149.42314851157	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	93	1178	40.0	-6	True	TTTAAA	-3
PB.7539.2	chr21	+	1546	4	full-splice_match	NDUFV3	ENST00000354250.6	1575	4	26	3	23	-3	multi-exon	FALSE	canonical	1	227145	junction_3	320322.55390396033	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	44	1465	20.0	-22	True	AATAAA	-19
PB.7539.1	chr21	+	2114	4	full-splice_match	NDUFV3	ENST00000354250.6	1575	4	24	-563	21	563	multi-exon	FALSE	canonical	1	227145	junction_3	320322.55390396033	NA	1	NA	TRUE	NA	NA	NA	C	coding	473	1422	46	1467	40.0	-24	True	ATTAAA	-21
PB.6375.3	chr2	-	3886	18	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	4	2	intron_retention	FALSE	canonical	1	74792	junction_17	122237.13299013136	NA	0	NA	TRUE	NA	NA	NA	C	coding	796	2391	50	2440	25.0	0	True	NA	NA
PB.2672.1	chr12	-	4061	7	full-splice_match	RNF41	ENST00000345093.8	5596	7	-15	1550	-3	-1221	multi-exon	FALSE	canonical	1	233729	junction_6	123327.2673536419	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	386	1339	100.0	-15	True	NA	NA
PB.2672.2	chr12	-	3948	7	full-splice_match	RNF41	ENST00000615206.4	5216	7	46	1222	46	-1222	multi-exon	FALSE	canonical	1	5830	junction_6	202207.66170339726	NA	3	NA	TRUE	NA	NA	NA	C	coding	317	954	274	1227	95.0	7430	False	NA	NA
PB.2672.3	chr12	-	3429	8	full-splice_match	RNF41	ENST00000394013.6	2452	8	-30	-947	-6	947	multi-exon	FALSE	canonical	1	58719	junction_5	219181.27459800977	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	745	1485	25.0	-18	True	AATAAA	-20
PB.2672.4	chr12	-	3147	7	full-splice_match	RNF41	ENST00000552656.5	1193	7	-10	-1944	-10	947	multi-exon	FALSE	canonical	1	59662	junction_6	183087.4743673696	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	250	1203	25.0	-22	True	AATAAA	-20
PB.2672.5	chr12	-	3272	7	full-splice_match	RNF41	ENST00000345093.8	5596	7	-5	2329	-4	946	multi-exon	FALSE	canonical	1	233729	junction_6	123327.2673536419	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	376	1329	30.0	-5	True	AATAAA	-19
PB.2672.6	chr12	-	2312	7	full-splice_match	RNF41	ENST00000345093.8	5596	7	-19	3303	-7	-28	multi-exon	FALSE	canonical	1	233729	junction_6	123327.2673536419	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	390	1343	85.0	-19	True	AAGAAA	-3
PB.2672.7	chr12	-	2187	7	full-splice_match	RNF41	ENST00000552656.5	1193	7	-25	-969	-25	-28	multi-exon	FALSE	canonical	1	59662	junction_6	183087.4743673696	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	265	1218	85.0	-37	True	AAGAAA	-3
PB.6984.9	chr2	-	7861	4	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-817	-419181	any annotated donor/acceptor	FALSE	canonical	1	11936	junction_3	43921.14213248811	NA	2	NA	TRUE	NA	NA	NA	B	coding	300	903	137	1039	40.0	57	False	AGTAAA	-30
PB.153.7	chr1	+	2204	7	full-splice_match	CDC42	ENST00000344548.7	2256	7	50	2	11	-2	multi-exon	FALSE	canonical	1	1904	junction_4	257568.85790820845	NA	0	NA	TRUE	NA	NA	NA	C	coding	191	576	202	777	20.0	9	True	ATTAAA	-19
PB.8317.1	chr3	-	4318	9	full-splice_match	TMEM39A	ENST00000319172.9	4369	9	50	1	14	-1	multi-exon	FALSE	canonical	1	182389	junction_8	46304.497747080415	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	372	1838	25.0	-18	True	ATTAAA	-18
PB.8317.2	chr3	-	3193	9	full-splice_match	TMEM39A	ENST00000319172.9	4369	9	37	1139	1	-1139	multi-exon	FALSE	canonical	1	182389	junction_8	46304.497747080415	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	385	1851	30.0	5656	False	TTTAAA	-19
PB.8317.3	chr3	-	2964	9	full-splice_match	TMEM39A	ENST00000319172.9	4369	9	51	1354	-15	-1354	multi-exon	FALSE	canonical	1	182389	junction_8	46304.497747080415	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	371	1837	15.0	-17	True	AATATA	-21
PB.8317.4	chr3	-	3805	8	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	0	-1274	intron_retention	FALSE	canonical	1	182389	junction_7	48633.621678330936	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	356	1354	40.0	-2	True	NA	NA
PB.8317.5	chr3	-	3770	8	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	-9	-1274	intron_retention	FALSE	canonical	1	29504	junction_7	89745.98651818614	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	321	1319	40.0	-11	True	NA	NA
PB.8317.6	chr3	-	2991	9	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	-6	-1274	intron_retention	FALSE	canonical	1	29504	junction_8	85434.01352323031	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	318	1784	40.0	-8	True	NA	NA
PB.8317.7	chr3	-	3089	10	novel_not_in_catalog	TMEM39A	novel	3043	4	NA	NA	0	-1276	intron_retention	FALSE	canonical	1	10381	junction_3	107169.75116395116	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	356	1318	35.0	-2	True	NA	NA
PB.8317.8	chr3	-	2778	8	novel_in_catalog	TMEM39A	novel	3043	4	NA	NA	9	-2322	intron_retention	FALSE	canonical	1	182389	junction_7	48633.621678330936	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	377	1375	25.0	-23	True	ATTAAA	-14
PB.4752.4	chr17	+	2656	4	full-splice_match	CYB5D1	ENST00000332439.4	3509	4	64	789	17	-789	multi-exon	FALSE	canonical	1	72657	junction_3	17165.888577835598	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	89	775	25.0	44	True	ATTAAA	-21
PB.4752.1	chr17	+	4332	3	incomplete-splice_match	CYB5D1	ENST00000332439.4	3509	4	-268	2	-31	-2	intron_retention	FALSE	canonical	1	108979	junction_1	92.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	181	546	421	966	35.0	1	True	NA	NA
PB.4752.3	chr17	+	2600	4	full-splice_match	CYB5D1	ENST00000571846.5	1870	4	289	-1019	5	-789	multi-exon	FALSE	canonical	1	10613	junction_3	46413.6070948548	NA	2	NA	TRUE	NA	NA	NA	C	coding	157	474	101	574	25.0	32	True	ATTAAA	-21
PB.4752.2	chr17	+	3289	4	full-splice_match	CYB5D1	ENST00000332439.4	3509	4	218	2	-82	-2	multi-exon	FALSE	canonical	1	72657	junction_3	17165.888577835598	NA	3	NA	TRUE	NA	NA	NA	C	coding	42	129	493	621	35.0	198	False	NA	NA
PB.601.1	chr1	+	2249	17	full-splice_match	AHCYL1	ENST00000369799.9	4015	17	405	1361	76	-15	multi-exon	FALSE	canonical	1	753483	junction_7	147464.63805783182	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	53	1555	95.0	63	False	NA	NA
PB.10647.4	chr7	+	3415	17	novel_in_catalog	CROT	novel	2959	19	NA	NA	3	-2	intron_retention	FALSE	canonical	1	71076	junction_4	16078.519356072367	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	197	1390	0.0	-49	False	AATAAA	-16
PB.601.2	chr1	+	2332	17	full-splice_match	AHCYL1	ENST00000359172.3	2503	17	157	14	157	-14	multi-exon	FALSE	canonical	1	34302	junction_1	283400.8996434465	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	186	1637	90.0	1	True	NA	NA
PB.4773.30	chr17	-	1830	14	novel_not_in_catalog	GAS7	novel	8003	14	NA	NA	7281	40	any annotated donor/acceptor	FALSE	canonical	1	19749	junction_13	97951.51164958032	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	227	1552	15.0	-1	True	NA	NA
PB.11439.1	chr9	-	921	6	full-splice_match	PLGRKT	ENST00000223864.6	932	6	11	0	0	0	multi-exon	FALSE	canonical	1	256744	junction_4	71142.0404728456	NA	0	NA	TRUE	NA	NA	NA	A	coding	147	444	212	655	30.0	-1	True	AATAAA	-18
PB.4773.31	chr17	-	2338	1	novel_in_catalog	GAS7	novel	8033	15	NA	NA	0	-75114	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-11	True	NA	NA
PB.5679.4	chr19	-	3687	11	novel_not_in_catalog	ZNF558	novel	7032	10	NA	NA	2	-1	any annotated donor/acceptor	FALSE	canonical	1	8306	junction_5	41226.97669111816	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	1118	2113	35.0	-23	False	AATAAA	-22
PB.248.2	chr1	+	3135	9	novel_not_in_catalog	TMEM39B	novel	2087	9	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	7921	junction_8	90448.54712962157	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	110	1381	20.0	-27	True	AAAAAG	-19
PB.11633.25	chr9	+	4331	13	incomplete-splice_match	DAPK1	ENST00000622514.4	5772	26	148768	3	-1272	0	5prime_fragment	FALSE	canonical	1	158807	junction_1	30744.284045529865	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	111	3065	20.0	3935	False	AATAAA	-15
PB.520.2	chr1	-	1591	7	full-splice_match	GTF2B	ENST00000370500.9	1351	7	53	-293	24	293	multi-exon	FALSE	canonical	1	357169	junction_2	88526.11543760532	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	67	1017	20.0	1	True	ATTAAA	-12
PB.6732.5	chr2	-	3015	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45051.05701590142	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-18	True	AATAAA	-16
PB.1673.10	chr10	+	1626	9	full-splice_match	FAM45A	ENST00000361432.2	1648	9	0	22	0	-1	multi-exon	FALSE	canonical	1	78	junction_3	12964.833162732948	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	27	1100	100.0	4	True	NA	NA
PB.12010.1	chrX	+	3773	1	full-splice_match	AC004656.1	ENST00000568479.1	4951	1	1177	1	1177	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	5764	False	AATAAA	-17
PB.6569.1	chr2	+	3054	12	novel_not_in_catalog	TTC31	novel	4025	7	NA	NA	-3	-3	intron_retention	TRUE	canonical	1	8363	junction_8	79381.29579795219	NA	1	NA	TRUE	NA	NA	NA	C	coding	350	1053	27	1079	30.0	-17	True	NA	NA
PB.10647.1	chr7	+	3104	17	novel_in_catalog	CROT	novel	2959	19	NA	NA	-36	-1	no_combination_of_known_junctions	FALSE	canonical	1	4188	junction_16	29204.861948010366	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	236	1954	5.0	-88	False	AATAAA	-17
PB.666.1	chr1	-	1619	1	intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	114	345	391	735	100.0	NA	False	NA	NA
PB.6476.40	chr2	-	2559	14	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-94	3709	any annotated donor/acceptor	FALSE	canonical	1	88562	junction_1	111587.07404841471	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2136	424	2559	55.0	1142	False	NA	NA
PB.467.15	chr1	-	4251	4	full-splice_match	GNG12	ENST00000370982.3	4404	4	30	123	-1	-123	multi-exon	FALSE	canonical	1	161296	junction_3	234357.46866319882	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	362	False	AATAAA	-22
PB.11633.21	chr9	+	5873	26	full-splice_match	DAPK1	ENST00000622514.4	5772	26	-104	3	-104	0	multi-exon	FALSE	canonical	1	5561	junction_1	50618.72875707567	NA	1	NA	TRUE	NA	NA	NA	C	coding	1430	4293	315	4607	20.0	-307	False	AATAAA	-15
PB.467.14	chr1	-	4444	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	-10	-76	any annotated donor/acceptor	FALSE	canonical	1	3338	junction_3	289569.8917338438	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	353	False	ATTAAA	-16
PB.11633.20	chr9	+	4024	18	novel_in_catalog	DAPK1	novel	5743	26	NA	NA	-9	28	intron_retention	FALSE	canonical	1	112699	junction_1	36431.56996656024	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	345	1703	5.0	0	True	AATAAA	-36
PB.6732.4	chr2	-	3083	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-11	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	126833.39188872937	NA	2	NA	TRUE	NA	NA	NA	C	coding	110	333	31	363	25.0	-1	True	AATAAA	-16
PB.1354.4	chr10	-	1253	1	full-splice_match	ZEB1-AS1	ENST00000607166.1	2503	1	-27	1277	5	283	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	5	True	NA	NA
PB.4319.1	chr16	-	1717	1	antisense	novelGene_RBBP6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.1354.1	chr10	-	2443	1	full-splice_match	ZEB1-AS1	ENST00000607166.1	2503	1	52	8	-46	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	26	340	35.0	2567	False	AATAAA	-11
PB.1354.2	chr10	-	2181	2	full-splice_match	ZEB1-AS1	ENST00000441257.1	585	2	-37	-1559	-2	-1	multi-exon	FALSE	canonical	1	16145	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-2	True	AATAAA	-18
PB.1354.3	chr10	-	2094	2	full-splice_match	ZEB1-AS1	ENST00000606286.1	476	2	78	-1696	-18	-6	multi-exon	FALSE	canonical	1	1982	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	1176	False	AATAAA	-13
PB.81.5	chr1	-	2209	7	full-splice_match	LZIC	ENST00000400903.6	1405	7	-17	-787	-17	6	multi-exon	FALSE	canonical	1	315297	junction_1	61333.54284475086	NA	1	NA	TRUE	NA	NA	NA	C	coding	190	573	171	743	15.0	541	False	NA	NA
PB.5561.1	chr19	+	3063	1	antisense	novelGene_SBNO2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	240	723	1327	2049	20.0	-152	False	NA	NA
PB.10854.6	chr7	-	2416	11	novel_not_in_catalog	SLC35B4	novel	6797	10	NA	NA	58	741	any annotated donor/acceptor	TRUE	canonical	1	1109	junction_2	73623.70413182156	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	243	1070	95.0	-64	True	NA	NA
PB.5355.5	chr18	+	2789	15	novel_in_catalog	USP14	novel	1803	15	NA	NA	-51	23	intron_retention	FALSE	canonical	1	332534	junction_1	147560.6948023457	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	215	1447	75.0	3	True	NA	NA
PB.10854.4	chr7	-	2007	10	full-splice_match	SLC35B4	ENST00000378509.8	6797	10	311	4479	157	741	multi-exon	FALSE	canonical	1	125530	junction_9	33903.27592751597	NA	3	NA	TRUE	NA	NA	NA	C	coding	263	792	194	985	95.0	3597	False	NA	NA
PB.10854.5	chr7	-	2721	11	novel_not_in_catalog	SLC35B4	novel	6797	10	NA	NA	24	741	any annotated donor/acceptor	FALSE	canonical	1	3624	junction_2	73138.89368208956	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	277	1104	95.0	3310	False	NA	NA
PB.10854.2	chr7	-	5665	10	full-splice_match	SLC35B4	ENST00000378509.8	6797	10	54	1078	54	-1078	multi-exon	FALSE	canonical	1	125530	junction_9	33903.27592751597	NA	4	NA	TRUE	NA	NA	NA	C	coding	331	996	247	1242	25.0	-68	True	NA	NA
PB.10854.3	chr7	-	4465	10	full-splice_match	SLC35B4	ENST00000378509.8	6797	10	161	2171	7	-2171	multi-exon	FALSE	canonical	1	125530	junction_9	33903.27592751597	NA	11	NA	TRUE	NA	NA	NA	C	coding	331	996	140	1135	10.0	-16	True	AATAAA	-23
PB.7024.18	chr2	+	3304	11	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-3	0	intron_retention	FALSE	canonical	1	228499	junction_2	124679.31212390451	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	100	1380	30.0	-6	True	AATAAA	-12
PB.5355.4	chr18	+	2199	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-23	2745	-6	-113	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	115	1599	30.0	-4	True	AATAAA	-25
PB.10326.5	chr6	-	2265	7	novel_in_catalog	SFT2D1	novel	1079	8	NA	NA	3	-3	intron_retention	FALSE	canonical	1	616783	junction_2	188534.24360105573	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	64	501	35.0	0	True	ATTAAA	-22
PB.7024.17	chr2	+	4074	8	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-3	0	intron_retention	FALSE	canonical	1	228499	junction_2	134726.62164091962	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	100	729	30.0	-6	True	AATAAA	-12
PB.7024.14	chr2	+	2379	13	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	22558	junction_10	152328.0088475925	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	107	1813	30.0	-13	True	AATAAA	-12
PB.7024.15	chr2	+	1771	9	incomplete-splice_match	ANKZF1	ENST00000323348.9	2579	14	69	1919	-1	28	3prime_fragment	FALSE	canonical	1	228499	junction_2	81130.90029843361	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	106	1386	15.0	-12	True	AATAAA	-18
PB.7024.12	chr2	+	3138	12	novel_in_catalog	ANKZF1	novel	2579	14	NA	NA	-6	0	intron_retention	FALSE	canonical	1	39006	junction_2	150380.6605066397	NA	1	NA	TRUE	NA	NA	NA	C	coding	361	1086	251	1336	30.0	-17	True	AATAAA	-12
PB.5355.7	chr18	+	2322	15	full-splice_match	USP14	ENST00000582707.5	1803	15	137	-656	-16	50	multi-exon	FALSE	canonical	1	23265	junction_3	239576.78130875976	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	180	1559	20.0	-69	True	AATAAA	-16
PB.10854.8	chr7	-	1576	10	full-splice_match	SLC35B4	ENST00000378509.8	6797	10	53	5168	53	52	multi-exon	FALSE	canonical	1	125530	junction_9	33903.27592751597	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	248	1243	25.0	-69	True	NA	NA
PB.10854.9	chr7	-	1442	10	full-splice_match	SLC35B4	ENST00000378509.8	6797	10	76	5279	-72	-5	multi-exon	FALSE	canonical	1	125530	junction_9	33903.27592751597	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	225	1220	30.0	-46	True	AATAGA	-44
PB.7143.16	chr20	+	3716	23	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	1	3175	junction_6	243215.29926304726	NA	24	NA	TRUE	NA	NA	NA	C	coding	569	1710	1474	3183	20.0	2	True	AATAAA	-14
PB.3343.2	chr14	+	3451	21	novel_not_in_catalog	RNF31	novel	550	2	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	8942	junction_8	98340.5567466826	NA	0	NA	TRUE	NA	NA	NA	C	coding	1055	3168	200	3367	5.0	0	True	AATAAA	-17
PB.7143.14	chr20	+	3047	22	novel_in_catalog	PTPRA	novel	3636	28	NA	NA	-2	-200	no_combination_of_known_junctions	FALSE	canonical	1	78230	junction_2	213663.51384047206	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	298	2712	65.0	-2	True	GATAAA	-35
PB.5355.6	chr18	+	4938	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-44	27	3	-27	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	3	NA	TRUE	NA	NA	NA	C	coding	494	1485	136	1620	85.0	-25	True	NA	NA
PB.7143.12	chr20	+	3502	25	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	1033	junction_2	279096.548720189	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	586	2967	20.0	-14	True	AATAAA	-16
PB.4984.8	chr17	-	2449	13	novel_in_catalog	DHX58	novel	782	3	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	1	1684	junction_12	38034.3011185481	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	252	1826	30.0	8903	False	NA	NA
PB.7143.10	chr20	+	3680	23	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	2	-312	any annotated donor/acceptor	FALSE	canonical	1	19234	junction_19	239011.36073449944	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	392	2410	30.0	-20	True	ATTAAA	-18
PB.3343.3	chr14	+	3557	21	novel_in_catalog	RNF31	novel	550	2	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	24385	junction_3	97168.55787290455	NA	7	NA	TRUE	NA	NA	NA	C	coding	887	2664	809	3472	5.0	10	True	AATAAA	-18
PB.5355.1	chr18	+	2932	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-39	2028	8	0	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	131	1615	85.0	-20	True	NA	NA
PB.7143.18	chr20	+	3281	23	full-splice_match	PTPRA	ENST00000216877.10	3725	23	38	406	9	2	multi-exon	FALSE	canonical	1	151770	junction_1	199377.18629082898	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	363	2744	15.0	9	True	AATAAA	-18
PB.7143.19	chr20	+	3329	23	novel_not_in_catalog	PTPRA	novel	3636	28	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	14057	junction_8	283863.20817854017	NA	1	NA	TRUE	NA	NA	NA	C	coding	476	1431	1364	2794	20.0	11	True	AATAAA	-16
PB.8387.14	chr3	-	1216	5	novel_in_catalog	CNBP	novel	1626	5	NA	NA	1	212	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	1913756.4662940234	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	138	653	25.0	-3	True	AATAAA	-22
PB.5355.3	chr18	+	3214	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-69	1776	3	252	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	161	1645	10.0	-50	True	AATAAA	-26
PB.614.3	chr1	+	4912	8	full-splice_match	RAP1A	ENST00000369709.3	5024	8	109	3	109	-3	multi-exon	FALSE	canonical	1	142867	junction_1	334165.61724720284	NA	1	NA	TRUE	NA	NA	NA	C	coding	184	555	71	625	30.0	64	False	AATAAA	-13
PB.8387.13	chr3	-	1231	5	full-splice_match	CNBP	ENST00000422453.6	1664	5	27	406	1	212	multi-exon	FALSE	canonical	1	2462385	junction_3	1291753.2303652999	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	135	668	25.0	0	True	AATAAA	-22
PB.614.1	chr1	+	2464	8	full-splice_match	RAP1A	ENST00000369709.3	5024	8	56	2504	56	1074	multi-exon	FALSE	canonical	1	142867	junction_1	334165.61724720284	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	124	678	20.0	11	True	AATAAA	-15
PB.5355.2	chr18	+	2330	16	full-splice_match	USP14	ENST00000261601.7	4921	16	-18	2609	-1	23	multi-exon	FALSE	canonical	1	332534	junction_1	171851.89320450716	NA	5	NA	TRUE	NA	NA	NA	C	coding	494	1485	110	1594	75.0	1	True	NA	NA
PB.614.6	chr1	+	5070	9	novel_in_catalog	RAP1A	novel	1586	8	NA	NA	45	-3	combination_of_known_junctions	FALSE	canonical	1	15353	junction_1	400958.61792644433	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	229	783	30.0	0	True	AATAAA	-13
PB.614.5	chr1	+	3098	8	full-splice_match	RAP1A	ENST00000369709.3	5024	8	45	1881	45	1697	multi-exon	FALSE	canonical	1	142867	junction_1	334165.61724720284	NA	2	NA	TRUE	NA	NA	NA	C	coding	184	555	135	689	45.0	0	True	AATAAA	-18
PB.614.4	chr1	+	1401	8	full-splice_match	RAP1A	ENST00000369709.3	5024	8	45	3578	45	0	multi-exon	FALSE	canonical	1	142867	junction_1	334165.61724720284	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	135	689	5.0	0	True	ATTAAA	-40
PB.3343.4	chr14	+	3253	21	novel_not_in_catalog	RNF31	novel	550	2	NA	NA	37	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	124640.77441628	NA	1	1	TRUE	NA	NA	NA	C	coding	870	2613	553	3165	0.0	253	False	AATAAA	-21
PB.9008.12	chr4	+	4352	17	novel_in_catalog	ABCE1	novel	3921	18	NA	NA	-8	-218	intron_retention	FALSE	canonical	1	18466	junction_15	178554.7808063637	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	145	1308	30.0	-11	True	NA	NA
PB.3588.13	chr14	-	4111	1	novel_in_catalog	TMED8	novel	7784	6	NA	NA	15	-37963	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.3588.12	chr14	-	3240	6	full-splice_match	TMED8	ENST00000216468.7	7784	6	3	4541	3	-4541	multi-exon	FALSE	canonical	1	66834	junction_5	25893.11532898272	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	54	1031	15.0	-13	True	AATATA	-24
PB.3588.11	chr14	-	4026	6	full-splice_match	TMED8	ENST00000216468.7	7784	6	15	3743	15	-3743	multi-exon	FALSE	canonical	1	66834	junction_5	25893.11532898272	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	42	1019	45.0	-1	True	NA	NA
PB.3588.10	chr14	-	5258	6	full-splice_match	TMED8	ENST00000216468.7	7784	6	-24	2550	-24	-2550	multi-exon	FALSE	canonical	1	66834	junction_5	25893.11532898272	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	81	1058	65.0	204	False	NA	NA
PB.919.1	chr1	-	1470	12	full-splice_match	NME7	ENST00000367811.7	1642	12	166	6	-4	0	multi-exon	TRUE	canonical	1	146159	junction_9	27177.340023940153	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	92	1222	35.0	-5	True	AATAAA	-12
PB.919.3	chr1	-	2226	1	novel_in_catalog	NME7	novel	1590	12	NA	NA	0	-62472	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.919.2	chr1	-	1801	11	incomplete-splice_match	NME7	ENST00000367811.7	1642	12	170	36300	0	690	3prime_fragment	FALSE	canonical	1	146159	junction_8	23290.95650697927	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	88	1194	75.0	-1	True	NA	NA
PB.6420.3	chr2	+	4243	3	incomplete-splice_match	QPCT	ENST00000338415.7	1739	7	63	9862	43	3407	3prime_fragment	FALSE	canonical	1	173050	junction_1	80810.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	96	701	100.0	-8148	False	NA	NA
PB.6420.2	chr2	+	1536	6	full-splice_match	QPCT	ENST00000404976.5	992	6	36	-580	36	0	multi-exon	FALSE	canonical	1	4455	junction_1	157345.8158210761	NA	3	NA	TRUE	NA	NA	NA	C	coding	312	939	103	1041	10.0	0	True	ATTAAA	-18
PB.6420.1	chr2	+	1604	7	full-splice_match	QPCT	ENST00000338415.7	1739	7	134	1	-20	-1	multi-exon	FALSE	canonical	1	173050	junction_1	85300.88853532926	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	25	1110	15.0	-8	True	ATTAAA	-17
PB.10338.72	chr6	-	5125	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-8	5	no_combination_of_known_junctions	FALSE	canonical	1	12566	junction_12	123520.72896314813	NA	0	NA	TRUE	NA	NA	NA	C	coding	1114	3345	146	3490	10.0	-1	True	GATAAA	-23
PB.7879.1	chr22	-	1561	2	novel_not_in_catalog	AL022328.4	novel	1001	2	NA	NA	-44	14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	31	96	372	467	70.0	-99	False	ATTAAA	-30
PB.11597.1	chr9	+	3542	25	full-splice_match	SMC5	ENST00000361138.6	5980	25	-34	2472	-34	171	multi-exon	FALSE	canonical	1	64273	junction_15	65400.33843949127	NA	0	NA	TRUE	NA	NA	NA	C	coding	1101	3306	152	3457	50.0	-50	True	AATAAA	-13
PB.7751.1	chr22	-	2980	3	full-splice_match	C1QTNF6	ENST00000337843.6	2934	3	-40	-6	-40	6	multi-exon	FALSE	canonical	1	50509	junction_2	14909.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	278	837	117	953	10.0	9366	False	ATTAAA	-26
PB.1624.1	chr10	+	2239	12	full-splice_match	SUFU	ENST00000369902.7	5001	12	-20	2782	-20	-2782	multi-exon	TRUE	canonical	1	68824	junction_6	18695.618895460444	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	187	1641	20.0	-5	True	TTTAAA	-20
PB.1624.2	chr10	+	4942	12	novel_not_in_catalog	SUFU	novel	5001	12	NA	NA	-17	-79	any annotated donor/acceptor	FALSE	canonical	1	28487	junction_6	26130.055343376793	NA	1	1	TRUE	NA	NA	NA	C	coding	485	1458	184	1641	5.0	-2	True	ATTAAA	-16
PB.1624.3	chr10	+	5058	13	novel_not_in_catalog	SUFU	novel	5001	12	NA	NA	-14	-83	any annotated donor/acceptor	FALSE	canonical	1	2578	junction_10	39280.79021891263	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	181	1761	10.0	1	True	ATTAAA	-12
PB.1671.10	chr10	-	1706	8	full-splice_match	FAM204A	ENST00000369172.8	872	8	-5	-829	3	497	multi-exon	FALSE	canonical	1	122897	junction_7	70298.24106720493	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	65	766	40.0	-6	True	AATAAA	-19
PB.1671.11	chr10	-	2075	10	novel_not_in_catalog	FAM204A	novel	13889	9	NA	NA	-1	495	any annotated donor/acceptor	FALSE	canonical	1	9553	junction_8	117636.22953782794	NA	3	NA	TRUE	NA	NA	NA	C	coding	240	723	415	1137	35.0	3	True	AATAAA	-17
PB.8630.1	chr3	+	894	1	full-splice_match	NCBP2-AS2	ENST00000602845.1	918	1	28	-4	28	4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	99	300	67	366	5.0	-25	True	AATAAA	-21
PB.10992.3	chr8	+	1696	10	full-splice_match	TUSC3	ENST00000382020.8	3683	10	1	1986	1	2	multi-exon	TRUE	canonical	1	394118	junction_1	166924.7619308002	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	208	1251	25.0	1	True	ATTAAA	-37
PB.905.2	chr1	-	5764	3	incomplete-splice_match	CREG1	ENST00000466652.2	1997	5	41	11902	3	-6	3prime_fragment	FALSE	canonical	1	766268	junction_2	264218.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	220	663	24	686	25.0	-3	True	ATTAAA	-13
PB.905.1	chr1	-	2015	4	full-splice_match	CREG1	ENST00000370509.4	1974	4	-47	6	-9	-6	multi-exon	FALSE	canonical	1	766268	junction_3	217303.89414519627	NA	4	NA	TRUE	NA	NA	NA	C	coding	220	663	74	736	25.0	-10	False	ATTAAA	-13
PB.719.13	chr1	-	1446	7	full-splice_match	ANP32E	ENST00000583931.5	3451	7	44	1961	-13	0	multi-exon	FALSE	canonical	1	780700	junction_5	150888.95244673223	NA	0	NA	TRUE	NA	NA	NA	C	coding	268	807	327	1133	25.0	-1	True	ATTAAA	-16
PB.719.12	chr1	-	2452	7	full-splice_match	ANP32E	ENST00000583931.5	3451	7	44	955	-13	-817	multi-exon	FALSE	canonical	1	780700	junction_5	150888.95244673223	NA	3	NA	TRUE	NA	NA	NA	C	coding	268	807	327	1133	45.0	-1	True	ATTAAA	-40
PB.8901.3	chr4	-	3152	9	full-splice_match	SLC39A8	ENST00000356736.4	3144	9	-9	1	-1	-1	multi-exon	FALSE	canonical	1	154990	junction_8	73773.49108250199	NA	1	NA	TRUE	NA	NA	NA	C	coding	460	1383	393	1775	20.0	-2	True	ATTAAA	-41
PB.9461.8	chr5	+	2594	2	full-splice_match	C5orf24	ENST00000394976.3	5065	2	10	2461	10	-136	multi-exon	FALSE	canonical	1	247691	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	219	785	10.0	2	True	ATTAAA	-14
PB.3457.29	chr14	+	4438	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-12	151	combination_of_known_junctions	FALSE	canonical	1	252824	junction_1	369320.46547478886	NA	2	NA	TRUE	NA	NA	NA	C	coding	1328	3987	144	4130	60.0	0	True	AATAAA	-24
PB.3457.28	chr14	+	2353	18	incomplete-splice_match	KTN1	ENST00000395308.5	4134	43	-87	39532	-17	3845	3prime_fragment	FALSE	canonical	1	83287	junction_1	417810.97930530185	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2079	273	2351	60.0	-5	True	GATAAA	-39
PB.8901.2	chr4	-	3115	9	incomplete-splice_match	SLC39A8	ENST00000424970.6	4032	11	-39	10626	-39	-1	3prime_fragment	FALSE	canonical	1	10435	junction_8	118852.8260859176	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	356	1738	20.0	237	False	ATTAAA	-41
PB.3457.25	chr14	+	3348	33	incomplete-splice_match	KTN1	ENST00000459737.5	4793	46	-88	22984	-20	9	3prime_fragment	FALSE	canonical	1	83287	junction_1	325597.88111101615	NA	8	NA	TRUE	NA	NA	NA	C	coding	1024	3072	276	3347	60.0	-8	True	NA	NA
PB.4421.1	chr16	-	3059	17	full-splice_match	BRD7	ENST00000394688.7	5370	17	130	2181	-25	892	multi-exon	FALSE	canonical	1	87	junction_12	77618.52233509973	NA	1	NA	TRUE	NA	NA	NA	C	coding	651	1956	31	1986	25.0	244	False	AATAAA	-12
PB.3457.27	chr14	+	4656	43	novel_in_catalog	KTN1	novel	291	2	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	391066.0350046389	NA	1	NA	TRUE	NA	NA	NA	C	coding	1300	3903	274	4176	20.0	-6	True	AATAAA	-24
PB.4421.3	chr16	-	2168	17	full-splice_match	BRD7	ENST00000394689.2	2145	17	-84	61	57	-61	multi-exon	FALSE	canonical	1	87	junction_12	72664.15179351572	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	90	2048	20.0	185	False	ATTAAA	-42
PB.3457.21	chr14	+	3156	31	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-87	24876	18	-1883	3prime_fragment	FALSE	canonical	1	252824	junction_1	251090.8022508568	NA	1	NA	TRUE	NA	NA	NA	C	coding	999	2997	158	3154	35.0	-14	True	ATTAAA	-4
PB.3457.20	chr14	+	2489	20	incomplete-splice_match	KTN1	ENST00000395308.5	4134	43	-97	33711	17	-5868	3prime_fragment	FALSE	canonical	1	83287	junction_1	395287.134761219	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2205	283	2487	20.0	-15	True	NA	NA
PB.3457.23	chr14	+	4736	44	novel_in_catalog	KTN1	novel	291	2	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	83287	junction_1	412494.7352822819	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	277	4263	30.0	-9	True	AATAAA	-17
PB.3457.22	chr14	+	3541	36	incomplete-splice_match	KTN1	ENST00000438792.6	4449	42	-83	12758	22	-876	3prime_fragment	FALSE	canonical	1	252824	junction_1	294590.34654839255	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3387	154	3540	70.0	-10	True	NA	NA
PB.1364.1	chr10	-	5639	17	full-splice_match	NRP1	ENST00000374867.6	5877	17	238	0	-25	0	multi-exon	FALSE	canonical	1	305140	junction_16	71432.0618236307	NA	1	NA	TRUE	NA	NA	NA	C	coding	923	2772	286	3057	25.0	-1	True	ATTAAA	-20
PB.1364.3	chr10	-	2213	12	novel_in_catalog	NRP1	novel	5407	16	NA	NA	-26	-5	combination_of_known_junctions	FALSE	canonical	1	112165	junction_1	119748.92529395765	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	488	2200	25.0	-2	True	AATAAA	-13
PB.1364.2	chr10	-	2232	12	full-splice_match	NRP1	ENST00000374822.8	2213	12	-21	2	-21	-2	multi-exon	FALSE	canonical	1	305140	junction_11	75790.65744950427	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	483	2216	15.0	3	True	AATAAA	-16
PB.5179.5	chr17	-	2348	14	novel_not_in_catalog	SMARCD2	novel	2342	14	NA	NA	-11	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	420566.3009652693	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	12	1493	5.0	-1	True	AATAAA	-14
PB.5558.11	chr19	+	2386	11	incomplete-splice_match	ARHGAP45	ENST00000590577.2	3218	13	2576	0	-1352	0	5prime_fragment	FALSE	canonical	1	379719	junction_5	74395.67832770933	NA	1	NA	TRUE	NA	NA	NA	C	coding	565	1698	67	1764	10.0	-8926	False	AATAAA	-16
PB.5558.12	chr19	+	2206	9	incomplete-splice_match	ARHGAP45	ENST00000590577.2	3218	13	2976	0	-952	0	5prime_fragment	FALSE	canonical	1	379719	junction_3	79778.61364494481	NA	2	NA	TRUE	NA	NA	NA	C	coding	485	1458	127	1584	10.0	-8526	False	AATAAA	-16
PB.5179.1	chr17	-	2325	13	full-splice_match	SMARCD2	ENST00000225742.13	1800	13	0	-525	0	2	multi-exon	TRUE	canonical	1	5806	junction_12	382063.1305371589	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	96	1466	5.0	-1	True	AATAAA	-18
PB.5179.3	chr17	-	2657	14	novel_not_in_catalog	SMARCD2	novel	2342	14	NA	NA	-51	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	420566.3009652693	NA	1	1	TRUE	NA	NA	NA	C	coding	494	1485	318	1802	5.0	-24	False	AATAAA	-14
PB.4424.11	chr16	+	3265	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	9	-3	any annotated donor/acceptor	FALSE	canonical	1	22381	junction_7	134304.62054330177	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	234	3065	20.0	9	True	NA	NA
PB.4424.10	chr16	+	3311	17	novel_in_catalog	CYLD	novel	777	3	NA	NA	7	6	no_combination_of_known_junctions	FALSE	canonical	1	4943	junction_8	134409.48770960842	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	236	1762	30.0	7	True	AATAAA	-24
PB.4424.13	chr16	+	3503	19	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	3213	junction_5	151269.6055454925	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	356	3127	40.0	-316	False	AATAAA	-20
PB.4424.12	chr16	+	4309	10	novel_in_catalog	CYLD	novel	777	3	NA	NA	-7	-20	no_combination_of_known_junctions	FALSE	canonical	1	4943	junction_8	153391.1654758014	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	226	1752	95.0	17	True	NA	NA
PB.4424.15	chr16	+	3717	18	full-splice_match	CYLD	ENST00000398568.6	3536	18	36	-217	36	217	multi-exon	FALSE	canonical	1	62250	junction_1	111775.50185916641	NA	3	1	TRUE	NA	NA	NA	C	coding	953	2862	265	3126	15.0	0	True	NA	NA
PB.4424.14	chr16	+	2887	12	incomplete-splice_match	CYLD	ENST00000569418.5	3513	18	60	9298	0	-163	3prime_fragment	FALSE	canonical	1	51586	junction_1	122879.59238886207	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	219	2315	50.0	-316	False	AATAAA	-16
PB.4424.17	chr16	+	3472	18	novel_not_in_catalog	CYLD	novel	777	3	NA	NA	36	2	any annotated donor/acceptor	FALSE	canonical	1	22381	junction_7	133071.48675764195	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	265	3096	40.0	0	True	AATAAA	-20
PB.4424.16	chr16	+	3637	19	novel_in_catalog	CYLD	novel	777	3	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	1	35208	junction_2	135405.64680910914	NA	0	NA	TRUE	NA	NA	NA	C	coding	953	2862	402	3263	40.0	0	True	AATAAA	-18
PB.4424.19	chr16	+	3097	12	incomplete-splice_match	CYLD	ENST00000398568.6	3536	18	36	9135	36	1	3prime_fragment	FALSE	canonical	1	62250	junction_1	120688.62215396066	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	265	2361	15.0	0	True	AATAAA	-15
PB.4424.18	chr16	+	3326	18	full-splice_match	CYLD	ENST00000398568.6	3536	18	36	174	36	-3	multi-exon	FALSE	canonical	1	62250	junction_1	111775.50185916641	NA	1	1	TRUE	NA	NA	NA	C	coding	953	2862	265	3126	20.0	0	True	NA	NA
PB.8601.11	chr3	+	3277	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-119	929	17	-685	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	218	3154	45.0	-161	False	AATAAA	-11
PB.8901.4	chr4	-	2740	8	novel_not_in_catalog	SLC39A8	novel	4032	11	NA	NA	409	-1	any annotated donor/acceptor	FALSE	canonical	1	3687	junction_7	129190.95767277275	NA	5	NA	TRUE	NA	NA	NA	C	coding	246	741	623	1363	20.0	-1	True	ATTAAA	-41
PB.9852.4	chr6	-	3783	21	novel_not_in_catalog	DHX16	novel	1933	12	NA	NA	-8	-11	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	137298.98660791345	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	1443	3671	50.0	-1	True	AATAAA	-41
PB.9852.7	chr6	-	3654	21	novel_not_in_catalog	DHX16	novel	1933	12	NA	NA	-18	-40	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	137750.64386052793	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	1109	3571	40.0	-11	True	AATAAA	-12
PB.9852.6	chr6	-	4060	21	novel_not_in_catalog	DHX16	novel	1933	12	NA	NA	-13	-25	any annotated donor/acceptor	FALSE	canonical	1	18917	junction_11	130594.42760450198	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	161	1711	40.0	-6	True	AATAAA	-27
PB.7622.1	chr22	+	3040	9	incomplete-splice_match	ZDHHC8	ENST00000334554.11	5046	11	7738	1572	-392	-15	5prime_fragment	FALSE	canonical	1	170951	junction_2	80651.24701260049	NA	0	NA	TRUE	NA	NA	NA	A	coding	663	1992	14	2005	75.0	7734	False	NA	NA
PB.9852.3	chr6	-	3422	20	full-splice_match	DHX16	ENST00000376442.7	3445	20	14	9	14	-9	multi-exon	FALSE	canonical	1	242015	junction_19	76856.30649274249	NA	0	NA	TRUE	NA	NA	NA	C	coding	1041	3126	183	3308	45.0	9524	False	AATAAA	-43
PB.9852.2	chr6	-	3103	20	novel_in_catalog	DHX16	novel	1933	12	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	1	9290	junction_19	110104.89308169666	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	37	2982	30.0	9529	False	AATAAA	-33
PB.8665.9	chr4	+	2488	4	incomplete-splice_match	RNF4	ENST00000511600.5	4123	8	32019	0	-605	0	5prime_fragment	FALSE	canonical	1	81665	junction_1	267169.7320094475	NA	2	NA	TRUE	NA	NA	NA	B	coding	116	351	626	976	40.0	2934	False	AATAAA	-17
PB.8901.9	chr4	-	1624	5	incomplete-splice_match	SLC39A8	ENST00000394833.6	3238	8	97	42247	97	494	3prime_fragment	FALSE	canonical	1	296592	junction_4	27666.425871442087	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	381	1274	30.0	1	True	ATTAAA	-9
PB.10165.3	chr6	-	2383	10	full-splice_match	TRAF3IP2	ENST00000340026.10	2785	10	400	2	-7	0	multi-exon	FALSE	canonical	1	20191	junction_9	109478.57553077182	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	196	1920	30.0	-4	True	AATAAA	-17
PB.377.4	chr1	+	2278	9	novel_in_catalog	AKR1A1	novel	1818	10	NA	NA	-20	0	intron_retention	FALSE	canonical	1	217805	junction_1	544668.1457577947	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	248	607	15.0	0	True	AATAAA	-16
PB.10165.2	chr6	-	2863	9	full-splice_match	TRAF3IP2	ENST00000368761.9	5128	9	-225	2490	-193	1	multi-exon	FALSE	canonical	1	151129	junction_6	54977.58923174401	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	705	2402	30.0	-198	False	AATAAA	-15
PB.871.4	chr1	+	2110	13	novel_in_catalog	USP21	novel	1150	5	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_10	104697.48401054768	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	205	1365	50.0	-4	True	AATAAA	-7
PB.5030.1	chr17	-	2550	5	full-splice_match	LSM12	ENST00000293406.7	2308	5	64	-306	-12	305	multi-exon	FALSE	canonical	1	91	junction_2	63.40741281585301	NA	2	NA	TRUE	NA	NA	NA	C	coding	195	588	85	672	20.0	-21	True	AGTAAA	-16
PB.1339.38	chr10	-	4511	3	incomplete-splice_match	ABI1	ENST00000376140.3	1446	11	-213	24659	11	3397	3prime_fragment	FALSE	canonical	1	740505	junction_1	77584.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	214	735	80.0	-93	False	NA	NA
PB.5030.2	chr17	-	2092	5	full-splice_match	LSM12	ENST00000293406.7	2308	5	138	78	62	-78	multi-exon	FALSE	canonical	1	91	junction_2	63.40741281585301	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	11	598	35.0	53	True	AATAAA	-21
PB.5030.5	chr17	-	2367	6	novel_not_in_catalog	LSM12	novel	2484	6	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	140.97006774489398	NA	2	NA	TRUE	NA	NA	NA	C	coding	138	417	89	505	15.0	-25	True	AATAAA	-22
PB.5030.4	chr17	-	2490	6	full-splice_match	LSM12	ENST00000585388.1	942	6	-17	-1531	-17	0	multi-exon	FALSE	canonical	1	91	junction_3	7719.037727592735	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	90	782	15.0	-26	True	AATAAA	-22
PB.5030.7	chr17	-	2065	5	novel_not_in_catalog	LSM12	novel	2484	6	NA	NA	344	0	any annotated donor/acceptor	FALSE	canonical	1	91	junction_2	400.59167178063	NA	2	NA	TRUE	NA	NA	NA	C	coding	59	180	314	493	15.0	3866	False	AATAAA	-22
PB.5030.6	chr17	-	2121	4	novel_not_in_catalog	LSM12	novel	2484	6	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	105.37973661425087	NA	10	1	TRUE	NA	NA	NA	C	coding	84	255	81	335	15.0	-17	True	AATAAA	-22
PB.5030.9	chr17	-	1283	5	full-splice_match	LSM12	ENST00000293406.7	2308	5	62	963	-14	464	multi-exon	FALSE	canonical	1	91	junction_2	63.40741281585301	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	87	674	20.0	-23	True	ATTAAA	-10
PB.1339.30	chr10	-	2265	11	full-splice_match	ABI1	ENST00000376140.3	1446	11	-93	-726	15	726	multi-exon	FALSE	canonical	1	141762	junction_8	272925.76733727433	NA	3	NA	TRUE	NA	NA	NA	C	coding	481	1446	94	1539	75.0	-4	True	NA	NA
PB.1339.33	chr10	-	2209	10	full-splice_match	ABI1	ENST00000376160.5	3515	10	20	1286	-18	691	multi-exon	FALSE	canonical	1	153831	junction_4	254091.20515415593	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	91	1518	15.0	-1	True	TATAAA	-32
PB.1339.32	chr10	-	2062	9	full-splice_match	ABI1	ENST00000536334.5	3380	9	101	1217	0	757	multi-exon	FALSE	canonical	1	141762	junction_6	296752.76420405926	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	124	1305	25.0	-3	True	AATAAA	-20
PB.1339.35	chr10	-	1924	11	full-splice_match	ABI1	ENST00000359188.8	3492	11	-18	1586	-18	391	multi-exon	FALSE	canonical	1	141762	junction_8	288084.1634703477	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	91	1533	10.0	-1	True	ATTAAA	-19
PB.1339.34	chr10	-	1912	10	full-splice_match	ABI1	ENST00000376138.7	3503	10	44	1547	0	430	multi-exon	FALSE	canonical	1	141762	junction_7	269845.0802513852	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	124	1482	45.0	-3	True	TTTAAA	-43
PB.1339.37	chr10	-	1850	9	novel_in_catalog	ABI1	novel	3362	10	NA	NA	2	385	combination_of_known_junctions	FALSE	canonical	1	282716	junction_2	198609.80029491874	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	122	1465	25.0	-1	True	ATTAAA	-13
PB.1339.36	chr10	-	1943	10	full-splice_match	ABI1	ENST00000376139.6	3516	10	-13	1586	2	391	multi-exon	FALSE	canonical	1	215007	junction_3	227564.63013541157	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	122	1552	10.0	-1	True	ATTAAA	-19
PB.4456.10	chr16	+	3715	14	novel_in_catalog	ADGRG1	novel	563	4	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	1	2982	junction_1	176915.40038897944	NA	2	NA	TRUE	NA	NA	NA	C	coding	687	2064	205	2268	15.0	-2	True	NA	NA
PB.4456.11	chr16	+	3757	15	novel_not_in_catalog	ADGRG1	novel	563	4	NA	NA	-27	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	203122.98112744908	NA	3	1	TRUE	NA	NA	NA	C	coding	687	2064	251	2314	30.0	1	True	NA	NA
PB.5193.3	chr17	-	6142	4	full-splice_match	GNA13	ENST00000439174.6	4922	4	204	-1424	204	1424	multi-exon	TRUE	canonical	1	382034	junction_2	49261.96982347426	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	43	1176	40.0	192	False	AATAAA	-17
PB.5193.5	chr17	-	4428	4	full-splice_match	GNA13	ENST00000439174.6	4922	4	493	1	493	-1	multi-exon	FALSE	canonical	1	382034	junction_2	49261.96982347426	NA	1	NA	TRUE	NA	NA	NA	C	coding	282	849	39	887	20.0	481	False	AATAAA	-14
PB.5165.3	chr17	-	6083	17	incomplete-splice_match	MED13	ENST00000397786.6	10465	30	80462	1784	-29057	-1784	5prime_fragment	TRUE	canonical	1	207718	junction_15	60812.57636878555	NA	0	NA	TRUE	NA	NA	NA	A	coding	1315	3948	57	4004	80.0	-140	False	AATACA	-41
PB.5193.7	chr17	-	4302	2	novel_not_in_catalog	GNA13	novel	4922	4	NA	NA	153	-1	any annotated donor/acceptor	FALSE	canonical	1	12398	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	201	761	20.0	53	True	AATAAA	-14
PB.727.1	chr1	-	3550	3	full-splice_match	MCL1	ENST00000369026.2	3932	3	377	5	317	-5	multi-exon	FALSE	canonical	1	2423665	junction_1	240748.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	14	736	35.0	642	False	AATAAA	-11
PB.871.1	chr1	+	2374	14	novel_in_catalog	USP21	novel	1150	5	NA	NA	5	0	intron_retention	TRUE	non_canonical	0	0	junction_11	101956.0180829236	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	410	2107	50.0	-31	True	AATAAA	-7
PB.727.4	chr1	-	5054	1	novel_in_catalog	MCL1	novel	3626	4	NA	NA	-23	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	124	375	414	788	30.0	-4	True	AATAAA	-12
PB.727.5	chr1	-	4686	2	novel_in_catalog	MCL1	novel	3626	4	NA	NA	-7	-5	intron_retention	FALSE	canonical	1	2905162	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	316	951	68	1018	35.0	12	True	AATAAA	-11
PB.727.6	chr1	-	4298	2	full-splice_match	MCL1	ENST00000464132.1	1099	2	-833	-2366	-20	-5	multi-exon	FALSE	canonical	1	2423665	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	1122	1484	35.0	-1	True	AATAAA	-11
PB.727.7	chr1	-	3702	2	full-splice_match	MCL1	ENST00000307940.3	1110	2	-83	-2509	-23	-5	multi-exon	FALSE	canonical	1	106847	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	414	899	35.0	-4	True	AATAAA	-11
PB.11866.5	chr9	-	8564	26	full-splice_match	SETX	ENST00000224140.5	11100	26	-2	2538	-2	-2538	multi-exon	FALSE	canonical	1	189648	junction_22	82802.08288023679	NA	0	NA	TRUE	NA	NA	NA	C	coding	2677	8034	186	8219	20.0	-2	True	TTTAAA	-6
PB.5437.11	chr18	-	4297	7	novel_not_in_catalog	B4GALT6	novel	4427	5	NA	NA	60	-4	any annotated donor/acceptor	FALSE	canonical	1	566	junction_6	62054.51846830602	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	326	934	35.0	NA	False	AATATA	-8
PB.11110.8	chr8	+	3380	22	full-splice_match	IKBKB	ENST00000520810.6	3938	22	2	556	2	-5	multi-exon	FALSE	canonical	1	82115	junction_1	87085.4030442455	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	185	2455	40.0	-14	True	ATTAAA	-13
PB.866.2	chr1	-	4178	10	novel_in_catalog	ARHGAP30	novel	4857	10	NA	NA	-2	3	intron_retention	FALSE	canonical	1	12563	junction_9	111899.86668357773	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	563	3406	20.0	-3	True	AATAAA	-19
PB.10773.4	chr7	-	2257	6	full-splice_match	SYPL1	ENST00000470347.1	1193	6	-119	-945	-9	-7	multi-exon	FALSE	canonical	1	12802	junction_1	544045.7586458698	NA	3	NA	TRUE	NA	NA	NA	C	coding	224	675	133	807	45.0	235	False	AATAAA	-8
PB.10773.5	chr7	-	2289	6	full-splice_match	SYPL1	ENST00000011473.6	2127	6	-169	7	-169	-7	multi-exon	FALSE	canonical	1	15671	junction_5	435235.7141106874	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	217	996	45.0	-170	False	AATAAA	-8
PB.9886.2	chr6	-	3985	28	novel_in_catalog	EHMT2	novel	1517	9	NA	NA	-2	-6	intron_retention	TRUE	canonical	1	59199	junction_9	184468.92286704658	NA	3	2	TRUE	NA	NA	NA	C	coding	1217	3654	13	3666	30.0	7	True	AATAAA	-14
PB.8438.1	chr3	+	2557	3	full-splice_match	RNF7	ENST00000273480.3	2763	3	121	85	6	-85	multi-exon	FALSE	canonical	1	320481	junction_2	164430.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	18	359	15.0	6	True	NA	NA
PB.11041.1	chr8	+	4482	41	novel_not_in_catalog	DOCK5	novel	786	4	NA	NA	18	6318	any annotated donor/acceptor	FALSE	canonical	1	1380	junction_40	36577.52110756516	NA	2	NA	TRUE	NA	NA	NA	A	coding	1379	4140	169	4308	50.0	-3	True	AATAAA	-13
PB.9886.3	chr6	-	3872	27	full-splice_match	EHMT2	ENST00000375530.8	3856	27	-22	6	-12	-6	multi-exon	FALSE	canonical	1	85688	junction_18	176720.95670206685	NA	1	1	TRUE	NA	NA	NA	C	coding	1176	3531	23	3553	30.0	-3	True	AATAAA	-14
PB.6732.9	chr2	-	2027	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-11	-10	any annotated donor/acceptor	FALSE	canonical	1	13	junction_1	125058.50060071886	NA	3	NA	TRUE	NA	NA	NA	C	coding	142	429	31	459	30.0	-1	True	AATAAA	-8
PB.11542.15	chr9	+	1997	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	57	2466	6	217	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-3	True	AAAACA	-28
PB.11542.14	chr9	+	2659	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	56	1805	5	878	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	ATTAAA	-16
PB.11542.17	chr9	+	3433	3	full-splice_match	EBLN3P	ENST00000629870.1	958	3	-96	-2379	9	-1121	multi-exon	FALSE	canonical	1	9870	junction_1	7285.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	NA	NA
PB.2580.7	chr12	-	3545	16	novel_in_catalog	DDX23	novel	3248	17	NA	NA	-10	3	intron_retention	FALSE	canonical	1	231843	junction_2	171297.16642925923	NA	2	NA	TRUE	NA	NA	NA	C	coding	600	1803	1035	2837	20.0	-11	False	AATAAA	-18
PB.11542.11	chr9	+	2881	2	full-splice_match	EBLN3P	ENST00000631093.1	636	2	-6	-2239	-6	-1092	multi-exon	FALSE	canonical	1	29491	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	47	144	193	336	25.0	-15	True	NA	NA
PB.11542.10	chr9	+	4084	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	42	394	-9	-394	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-18	True	NA	NA
PB.11542.13	chr9	+	3184	2	full-splice_match	EBLN3P	ENST00000627197.1	579	2	-25	-2580	4	-775	multi-exon	FALSE	canonical	1	28762	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	47	144	179	322	20.0	-5	True	NA	NA
PB.11542.12	chr9	+	2766	3	full-splice_match	EBLN3P	ENST00000629870.1	958	3	-111	-1697	-6	880	multi-exon	FALSE	canonical	1	9870	junction_1	7285.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-15	True	ATTAAA	-18
PB.3880.3	chr15	-	3895	13	novel_in_catalog	FAM214A	novel	1570	2	NA	NA	-23	183	combination_of_known_junctions	FALSE	canonical	1	5073	junction_12	80817.15015184999	NA	0	NA	TRUE	NA	NA	NA	C	coding	1076	3231	181	3411	55.0	4160	False	AATAAA	-16
PB.6910.48	chr2	-	3217	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	140	953	58	304	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	249	2501	25.0	6907	False	AATAGA	-21
PB.6910.49	chr2	-	3087	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	95	1128	13	129	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	294	2546	25.0	4	True	NA	NA
PB.11827.2	chr9	+	1366	8	full-splice_match	SET	ENST00000372692.8	2850	8	226	1258	226	248	multi-exon	FALSE	canonical	1	178448	junction_4	460099.40564169036	NA	4	NA	TRUE	NA	NA	NA	C	coding	290	873	16	888	80.0	-5	True	NA	NA
PB.3065.6	chr13	-	3257	5	full-splice_match	RNF6	ENST00000346166.7	3282	5	21	4	-11	2	multi-exon	FALSE	canonical	1	94736	junction_4	98148.28579501528	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	142	2199	15.0	-18	True	AATAAA	-22
PB.6910.40	chr2	-	4081	26	novel_not_in_catalog	STAT1	novel	663	3	NA	NA	10	-232	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	542669.8464654266	NA	7	2	TRUE	NA	NA	NA	C	coding	636	1911	297	2207	15.0	1	True	ATTAAA	-39
PB.7212.1	chr20	-	3981	3	novel_not_in_catalog	AL121772.1	novel	2335	2	NA	NA	-2740	7	any annotated donor/acceptor	FALSE	canonical	1	1561	junction_1	1254.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	123	372	420	791	30.0	-29	True	NA	NA
PB.6732.8	chr2	-	3467	5	novel_not_in_catalog	POLR2D	novel	5042	4	NA	NA	-5	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	126828.9602365623	NA	4	1	TRUE	NA	NA	NA	C	coding	110	333	25	357	25.0	5	True	AATAAA	-15
PB.6910.45	chr2	-	3753	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	89	468	7	-466	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	300	2552	55.0	-2	True	NA	NA
PB.6910.46	chr2	-	3667	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	90	553	8	-551	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	3	1	TRUE	NA	NA	NA	C	coding	750	2253	299	2551	20.0	-1	True	NA	NA
PB.6910.47	chr2	-	3434	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	92	784	10	473	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	297	2549	20.0	1	True	GATAAA	-26
PB.7094.1	chr2	-	1366	4	full-splice_match	HES6	ENST00000272937.9	1454	4	86	2	0	1	multi-exon	FALSE	canonical	1	163209	junction_1	43293.19230805488	NA	0	NA	TRUE	NA	NA	NA	A	coding	224	675	134	808	25.0	-1	True	AATAAA	-25
PB.995.1	chr1	-	3972	15	full-splice_match	IVNS1ABP	ENST00000367498.7	4199	15	223	4	167	-4	multi-exon	TRUE	canonical	1	480060	junction_14	328786.5563384907	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	401	2329	35.0	746	False	AATAAA	-24
PB.12161.11	chrX	+	1824	3	full-splice_match	P2RY10	ENST00000475374.5	791	3	-27	-1006	-27	132	multi-exon	FALSE	canonical	1	32255	junction_1	15715.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	259	1278	30.0	-9	True	ATTAAA	-31
PB.12161.10	chrX	+	1673	3	full-splice_match	P2RY10	ENST00000475374.5	791	3	-27	-855	-27	-5	multi-exon	FALSE	canonical	1	32255	junction_1	15715.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	259	1278	40.0	-9	True	TATAAA	-10
PB.12161.13	chrX	+	2977	3	full-splice_match	P2RY10	ENST00000475374.5	791	3	-22	-2164	-22	1290	multi-exon	FALSE	canonical	1	32255	junction_1	15715.0	NA	18	NA	TRUE	NA	NA	NA	C	coding	339	1020	254	1273	50.0	-4	True	AATGAA	-3
PB.12161.12	chrX	+	994	2	full-splice_match	P2RY10	ENST00000461541.5	439	2	-23	-532	-23	323	multi-exon	FALSE	canonical	1	56963	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	882	112	993	5.0	-5	True	NA	NA
PB.10763.7	chr7	+	1869	4	incomplete-splice_match	PSMC2	ENST00000425206.5	656	6	3400	4731	-46	-4731	internal_fragment	FALSE	canonical	1	677301	junction_3	365054.30611196585	NA	1	NA	TRUE	NA	NA	NA	C	coding	114	345	47	391	95.0	23	True	NA	NA
PB.12161.14	chrX	+	4530	1	novel_in_catalog	P2RY10	novel	1597	2	NA	NA	-18	-10939	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	NA	NA
PB.10763.5	chr7	+	2651	10	novel_in_catalog	PSMC2	novel	682	6	NA	NA	-68	-55	intron_retention	FALSE	canonical	1	677301	junction_3	329152.30715000746	NA	3	NA	TRUE	NA	NA	NA	C	coding	141	426	69	494	15.0	1	True	AATAAA	-15
PB.10763.4	chr7	+	2067	11	novel_in_catalog	PSMC2	novel	682	6	NA	NA	-69	-55	intron_retention	FALSE	canonical	1	677301	junction_3	313655.95432194497	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1156	1968	15.0	0	True	AATAAA	-15
PB.10117.4	chr6	-	5232	1	genic	GPR63	novel	NA	NA	NA	NA	-50	-38156	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	1	True	NA	NA
PB.29.2	chr1	-	3486	6	novel_not_in_catalog	AL031282.2	novel	5079	20	NA	NA	-8355	-24658	any annotated donor/acceptor	FALSE	canonical	1	8818	junction_1	23794.721375969082	NA	3	NA	TRUE	NA	NA	NA	B	coding	253	762	468	1229	25.0	26	False	AATAAA	-5
PB.10117.1	chr6	-	6018	2	full-splice_match	GPR63	ENST00000229955.3	5952	2	-64	-2	-64	2	multi-exon	FALSE	canonical	1	13989	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	411	1670	35.0	1	True	AATAAA	-19
PB.10117.2	chr6	-	5543	2	full-splice_match	GPR63	ENST00000229955.3	5952	2	-71	480	-71	-480	multi-exon	FALSE	canonical	1	13989	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	418	1677	30.0	-6	False	AATAAA	-22
PB.10117.3	chr6	-	2829	2	full-splice_match	GPR63	ENST00000229955.3	5952	2	-26	3149	-26	-3149	multi-exon	FALSE	canonical	1	13989	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	373	1632	80.0	-13	True	AAGAAA	-26
PB.4830.8	chr17	+	4857	6	full-splice_match	SPECC1	ENST00000395525.7	2536	6	-73	-2248	22	0	multi-exon	FALSE	canonical	1	65390	junction_5	128348.15575862397	NA	2	NA	TRUE	NA	NA	NA	C	coding	709	2130	182	2311	15.0	-8	True	NA	NA
PB.4830.9	chr17	+	2258	12	novel_in_catalog	SPECC1	novel	614	5	NA	NA	23	4	combination_of_known_junctions	FALSE	canonical	1	49081	junction_1	87058.50072677217	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	338	1564	10.0	-7	True	NA	NA
PB.3115.9	chr13	-	3688	13	full-splice_match	PROSER1	ENST00000352251.7	5168	13	202	1278	-37	-4	multi-exon	FALSE	canonical	1	195977	junction_12	67206.60753456877	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	633	3467	35.0	2	True	AATAAA	-21
PB.6320.18	chr2	+	1892	3	full-splice_match	TRIB2	ENST00000405331.3	830	3	-1064	2	239	-2	multi-exon	FALSE	canonical	1	32333	junction_2	143594.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	756	1135	1890	40.0	-1112	False	AATAAA	-21
PB.6320.19	chr2	+	1719	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	261	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	143610.599915961	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	756	962	1717	40.0	-7	True	AATAAA	-21
PB.4830.2	chr17	+	2794	8	novel_in_catalog	SPECC1	novel	614	5	NA	NA	33	-8	combination_of_known_junctions	TRUE	canonical	1	14879	junction_7	151823.94126468612	NA	1	1	TRUE	NA	NA	NA	C	coding	784	2355	126	2480	65.0	1	True	AATAAA	-12
PB.3115.4	chr13	-	4891	13	full-splice_match	PROSER1	ENST00000352251.7	5168	13	-10	287	-10	0	multi-exon	FALSE	canonical	1	195977	junction_12	67206.60753456877	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	845	3679	30.0	-24	True	AATAAA	-14
PB.3115.7	chr13	-	3081	3	full-splice_match	PROSER1	ENST00000468017.1	437	3	-1657	-987	-1657	0	multi-exon	FALSE	canonical	1	10590	junction_1	170123.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	605	1818	100	1917	30.0	-4	True	AATAAA	-14
PB.4830.1	chr17	+	3952	15	full-splice_match	SPECC1	ENST00000395527.8	3363	15	-27	-562	-8	-10	multi-exon	FALSE	canonical	1	9117	junction_1	101915.05478686249	NA	8	NA	TRUE	NA	NA	NA	C	coding	1068	3207	111	3317	80.0	-30	True	NA	NA
PB.2278.2	chr11	+	5944	20	full-splice_match	DIXDC1	ENST00000440460.6	5897	20	-50	3	-50	-3	multi-exon	FALSE	canonical	1	47565	junction_1	30276.603578403032	NA	2	NA	TRUE	NA	NA	NA	C	coding	683	2052	348	2399	40.0	-15	True	AATAAA	-17
PB.4830.7	chr17	+	3666	12	novel_in_catalog	SPECC1	novel	614	5	NA	NA	19	-10	combination_of_known_junctions	FALSE	canonical	1	17458	junction_10	97982.35788638283	NA	5	1	TRUE	NA	NA	NA	C	coding	948	2847	185	3031	80.0	-11	True	NA	NA
PB.3115.3	chr13	-	4604	12	full-splice_match	PROSER1	ENST00000625998.2	5102	12	210	288	-29	-1	multi-exon	FALSE	canonical	1	22230	junction_11	101613.38019934771	NA	3	NA	TRUE	NA	NA	NA	C	coding	922	2769	625	3393	25.0	10	True	AATAAA	-13
PB.3115.2	chr13	-	4893	12	full-splice_match	PROSER1	ENST00000625998.2	5102	12	208	1	-31	-1	multi-exon	FALSE	canonical	1	22230	junction_11	101613.38019934771	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	627	3395	25.0	8	True	CATAAA	-15
PB.391.5	chr1	-	1757	9	full-splice_match	ATPAF1	ENST00000574428.5	1760	9	6	-3	6	-1	multi-exon	FALSE	canonical	1	431663	junction_8	71164.29010746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	328	987	37	1023	20.0	5	True	AATAAA	-22
PB.1040.3	chr1	-	6381	27	full-splice_match	KDM5B	ENST00000367265.8	10341	27	1050	2910	1	0	multi-exon	FALSE	canonical	1	203318	junction_26	109707.08084915845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	116	4750	15.0	0	True	ATTAAA	-15
PB.9034.1	chr4	+	3029	3	full-splice_match	TLR2	ENST00000646900.1	1177	3	201	-2053	6	0	multi-exon	FALSE	canonical	1	17059	junction_1	12618.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	784	2355	238	2592	25.0	-9	True	NA	NA
PB.1010.12	chr1	+	1868	9	full-splice_match	TROVE2	ENST00000367446.7	3081	9	94	1119	71	0	multi-exon	FALSE	canonical	1	23109	junction_1	116589.09690172308	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	117	1733	85.0	431	False	AATGAA	-44
PB.1010.11	chr1	+	2218	1	novel_in_catalog	TROVE2	novel	2143	9	NA	NA	-8	1545	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	38	117	242	358	35.0	-24	True	NA	NA
PB.1010.10	chr1	+	2021	10	novel_in_catalog	TROVE2	novel	2143	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	13379	junction_3	154861.4483074356	NA	0	NA	TRUE	NA	NA	NA	C	coding	560	1683	204	1886	85.0	-40	True	AATGAA	-44
PB.1040.5	chr1	-	5712	28	full-splice_match	KDM5B	ENST00000367264.7	6520	28	42	766	0	3	multi-exon	FALSE	canonical	1	16204	junction_22	141106.42776125346	NA	0	NA	TRUE	NA	NA	NA	C	coding	1580	4743	135	4877	40.0	-1	True	AATAAA	-17
PB.2822.24	chr12	+	2975	12	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	1894	junction_1	92719.60817147081	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	464	1678	25.0	1	True	AATAAA	-19
PB.2822.25	chr12	+	3389	16	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	2	-21	intron_retention	FALSE	canonical	1	377	junction_5	128125.12011023531	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	1028	2242	80.0	2	True	NA	NA
PB.2822.26	chr12	+	3144	15	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	2	-18	any annotated donor/acceptor	FALSE	canonical	1	2077	junction_4	131341.83556528424	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	780	1994	85.0	2	True	NA	NA
PB.2822.27	chr12	+	3365	15	full-splice_match	NEDD1	ENST00000557644.5	2367	15	-62	-936	-62	-15	multi-exon	FALSE	canonical	1	10923	junction_1	94343.97450039198	NA	3	NA	TRUE	NA	NA	NA	C	coding	667	2004	209	2212	85.0	-5118	False	NA	NA
PB.2822.20	chr12	+	3584	16	full-splice_match	NEDD1	ENST00000266742.8	4046	16	34	428	0	-2	multi-exon	FALSE	canonical	1	85484	junction_2	88245.9272565029	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	306	2288	20.0	0	True	AATAAA	-18
PB.2822.21	chr12	+	3320	13	novel_not_in_catalog	NEDD1	novel	4046	16	NA	NA	0	199	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	95142.1501968677	NA	4	1	TRUE	NA	NA	NA	C	coding	571	1716	108	1823	75.0	0	True	TTTAAA	-29
PB.2822.22	chr12	+	3092	13	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	3804	junction_1	94326.3090027556	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	81	1796	20.0	0	True	AATAAA	-18
PB.2822.23	chr12	+	2946	13	novel_in_catalog	NEDD1	novel	4046	16	NA	NA	0	-18	no_combination_of_known_junctions	FALSE	canonical	1	3804	junction_1	94326.3090027556	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	81	1796	85.0	0	True	NA	NA
PB.9197.1	chr5	-	3096	5	novel_in_catalog	RPL37	novel	7686	4	NA	NA	-26	-3	no_combination_of_known_junctions	FALSE	canonical	1	366734	junction_1	8750766.204635613	NA	0	NA	TRUE	NA	NA	NA	B	coding	97	294	54	347	40.0	410	False	AATAAA	-15
PB.9197.2	chr5	-	1982	5	novel_in_catalog	RPL37	novel	7686	4	NA	NA	-13	-1104	no_combination_of_known_junctions	FALSE	canonical	1	366734	junction_1	8750766.204635613	NA	1	NA	TRUE	NA	NA	NA	B	coding	97	294	41	334	80.0	-4	True	NA	NA
PB.2822.28	chr12	+	3585	15	incomplete-splice_match	NEDD1	ENST00000266742.8	4046	16	190	574	-53	-18	5prime_fragment	FALSE	canonical	1	85484	junction_1	83239.01842987078	NA	16	1	TRUE	NA	NA	NA	C	coding	660	1983	453	2435	85.0	-5109	False	NA	NA
PB.4560.1	chr16	-	3517	10	incomplete-splice_match	ADAT1	ENST00000307921.7	1869	11	26	-901	1	-1	intron_retention	FALSE	canonical	1	124263	junction_4	29037.934851577244	NA	2	NA	TRUE	NA	NA	NA	C	coding	502	1509	894	2402	95.0	6	True	NA	NA
PB.4560.2	chr16	-	2746	11	full-splice_match	ADAT1	ENST00000307921.7	1869	11	26	-903	1	1	multi-exon	FALSE	canonical	1	38309	junction_10	44352.04994867768	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1509	121	1629	100.0	6	True	NA	NA
PB.4560.3	chr16	-	2671	12	novel_not_in_catalog	AC025287.1	novel	798	8	NA	NA	-14853	-57700	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58894.318319882404	NA	2	1	TRUE	NA	NA	NA	B	coding	502	1509	145	1653	100.0	-18	True	NA	NA
PB.4560.4	chr16	-	3558	9	novel_not_in_catalog	AC025287.1	novel	798	8	NA	NA	-14799	-57701	intron_retention	FALSE	non_canonical	0	0	junction_1	72573.17650137687	NA	1	NA	TRUE	NA	NA	NA	B	coding	372	1119	1070	2188	100.0	-4	True	NA	NA
PB.2797.8	chr12	-	1373	6	incomplete-splice_match	ATP2B1	ENST00000428670.7	7032	21	-7	42452	-7	11299	3prime_fragment	FALSE	canonical	1	129806	junction_5	227491.28927095208	NA	0	NA	TRUE	NA	NA	NA	B	coding	300	900	474	1373	75.0	-8	True	AAGAAA	-7
PB.2797.9	chr12	-	1324	6	novel_in_catalog	ATP2B1	novel	6977	21	NA	NA	-112	11299	combination_of_known_junctions	FALSE	canonical	1	101417	junction_5	236073.4733430251	NA	1	NA	TRUE	NA	NA	NA	B	coding	300	900	425	1324	75.0	225	False	AAGAAA	-7
PB.76.2	chr1	+	3856	6	full-splice_match	TMEM201	ENST00000340305.9	3851	6	-11	6	-11	-6	multi-exon	FALSE	canonical	1	62811	junction_1	36757.43894451843	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	21	1199	10.0	0	True	AATAAA	-22
PB.2797.7	chr12	-	3579	20	novel_in_catalog	ATP2B1	novel	6977	21	NA	NA	-47	2165	combination_of_known_junctions	FALSE	canonical	1	101417	junction_19	145147.9312310504	NA	0	NA	TRUE	NA	NA	NA	B	coding	1073	3219	360	3578	55.0	-32	True	TTTAAA	-30
PB.2797.5	chr12	-	4575	21	novel_in_catalog	ATP2B1	novel	6977	21	NA	NA	-55	98	combination_of_known_junctions	FALSE	canonical	1	101417	junction_20	141516.96861238938	NA	0	NA	TRUE	NA	NA	NA	B	coding	1217	3654	368	4021	65.0	-40	True	NA	NA
PB.2797.3	chr12	-	5213	21	novel_in_catalog	ATP2B1	novel	6977	21	NA	NA	-49	742	combination_of_known_junctions	FALSE	canonical	1	101417	junction_20	141516.96861238938	NA	2	NA	TRUE	NA	NA	NA	B	coding	1217	3654	362	4015	35.0	-34	True	AATAAA	-40
PB.76.4	chr1	+	3385	11	full-splice_match	TMEM201	ENST00000340381.10	3776	11	-168	559	-168	-559	multi-exon	FALSE	canonical	1	56375	junction_7	48206.293585381565	NA	0	NA	TRUE	NA	NA	NA	C	coding	666	2001	178	2178	25.0	5	True	GATAAA	-21
PB.9914.3	chr6	+	4026	6	full-splice_match	HLA-DPB1	ENST00000418931.6	1560	6	27	-2493	27	2493	multi-exon	FALSE	canonical	1	1215308	junction_2	721760.857794713	NA	5	NA	TRUE	NA	NA	NA	C	coding	257	774	93	866	30.0	-38	True	AATAAA	-22
PB.8433.20	chr3	+	3641	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	0	-1090	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	787	1251	35.0	0	True	TATAAA	-10
PB.3366.12	chr14	+	2690	15	full-splice_match	G2E3	ENST00000206595.10	5804	15	36	3078	-1	313	multi-exon	FALSE	canonical	1	39855	junction_11	39802.409323354754	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	119	2239	45.0	1	True	ATTAAA	-27
PB.8433.22	chr3	+	4404	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	181	-3284	74	1	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	4	NA	TRUE	NA	NA	NA	C	coding	261	786	138	923	25.0	157	False	ATTAAA	-11
PB.8433.23	chr3	+	2810	3	incomplete-splice_match	SLC25A36	ENST00000507429.5	3537	4	-43	4356	1	-1616	3prime_fragment	FALSE	canonical	1	268130	junction_2	9136.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1	True	NA	NA
PB.8433.24	chr3	+	2727	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	1	1280	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	786	1250	85.0	1	True	NA	NA
PB.8433.25	chr3	+	3507	5	novel_not_in_catalog	SLC25A36	novel	4638	7	NA	NA	3	439	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	121336.63388276436	NA	3	NA	TRUE	NA	NA	NA	C	coding	132	399	210	608	75.0	3	True	NA	NA
PB.8433.26	chr3	+	1328	7	full-splice_match	SLC25A36	ENST00000324194.10	1301	7	-40	13	4	-10	multi-exon	FALSE	canonical	1	161413	junction_4	103674.13546205994	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	209	1144	75.0	4	True	NA	NA
PB.8433.27	chr3	+	3570	4	full-splice_match	SLC25A36	ENST00000507429.5	3537	4	-40	7	4	-7	multi-exon	FALSE	canonical	1	268130	junction_2	8233.680478511553	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	209	607	30.0	4	True	AATAAA	-15
PB.8433.28	chr3	+	5786	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	4	31	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	5	NA	TRUE	NA	NA	NA	C	coding	139	420	209	628	15.0	4	True	AATAAA	-25
PB.8433.29	chr3	+	3026	8	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	0	1588	combination_of_known_junctions	FALSE	canonical	1	37216	junction_4	149690.50397825945	NA	3	NA	TRUE	NA	NA	NA	C	coding	139	420	203	622	30.0	10	True	AATAAA	-30
PB.566.6	chr1	+	2563	12	full-splice_match	RTCA	ENST00000260563.4	1534	12	-33	-996	0	-2	multi-exon	FALSE	canonical	1	20628	junction_2	214061.46820450376	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	161	1300	20.0	-22	True	AATAAA	-19
PB.4547.1	chr16	+	1040	7	full-splice_match	PSMD7	ENST00000219313.8	1670	7	44	586	-1	96	multi-exon	FALSE	canonical	1	928248	junction_2	504516.33051184664	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	942	97	1038	65.0	2	True	NA	NA
PB.8749.8	chr4	+	2638	8	novel_in_catalog	N4BP2	novel	9744	18	NA	NA	-4	17907	no_combination_of_known_junctions	FALSE	canonical	1	4033	junction_1	28473.424398543844	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	237	2636	65.0	59	True	NA	NA
PB.4547.3	chr16	+	1631	7	full-splice_match	PSMD7	ENST00000219313.8	1670	7	38	1	-2	-1	multi-exon	FALSE	canonical	1	928248	junction_2	504516.33051184664	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	103	1077	10.0	-4	True	ATTAAA	-15
PB.4547.2	chr16	+	1909	1	novel_in_catalog	PSMD7	novel	1670	7	NA	NA	17	-1777	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-25	True	NA	NA
PB.4547.5	chr16	+	2016	6	full-splice_match	PSMD7	ENST00000568615.2	931	6	-11	-1074	-2	-105	multi-exon	FALSE	canonical	1	928248	junction_2	551168.033969823	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	98	631	30.0	1	True	ATTAAA	-38
PB.4547.4	chr16	+	2344	7	novel_not_in_catalog	PSMD7	novel	1670	7	NA	NA	1	-106	any annotated donor/acceptor	FALSE	canonical	1	8061	junction_1	732145.4785338468	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	1552	2295	30.0	-1	True	ATTAAA	-37
PB.8749.1	chr4	+	2582	12	novel_not_in_catalog	N4BP2	novel	9744	18	NA	NA	-25	17478	any annotated donor/acceptor	TRUE	canonical	1	14	junction_4	34086.77125918548	NA	8	1	TRUE	NA	NA	NA	C	coding	577	1731	850	2580	80.0	-49	True	AAGAAA	-44
PB.501.7	chr1	-	1355	7	full-splice_match	CTBS	ENST00000370630.5	6600	7	-2	5247	-2	0	multi-exon	FALSE	canonical	1	190444	junction_6	46708.689479462904	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	52	1209	50.0	-27	True	AATAAA	-26
PB.9338.4	chr5	-	3019	5	incomplete-splice_match	CETN3	ENST00000522083.5	1026	6	-31	423	-2	-200	3prime_fragment	FALSE	canonical	1	14223	junction_1	210127.92044772988	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	128	679	15.0	-36	True	AATAAA	-18
PB.8749.2	chr4	+	2712	9	incomplete-splice_match	N4BP2	ENST00000261435.10	9744	18	104	37741	-6	17905	3prime_fragment	FALSE	canonical	1	29819	junction_2	22104.255336572074	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	313	2712	70.0	80	True	NA	NA
PB.9338.2	chr5	-	6199	4	full-splice_match	CETN3	ENST00000522565.5	867	4	0	-5332	0	-5	multi-exon	FALSE	canonical	1	457418	junction_1	37042.85867298401	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	97	567	30.0	-5	True	AATAAA	-22
PB.9338.3	chr5	-	6086	4	full-splice_match	CETN3	ENST00000522565.5	867	4	2	-5221	2	33	multi-exon	FALSE	canonical	1	457418	junction_1	37042.85867298401	NA	5	NA	TRUE	NA	NA	NA	C	coding	156	471	95	565	20.0	-3	True	TATAAA	-14
PB.8749.7	chr4	+	9327	17	novel_in_catalog	N4BP2	novel	9744	18	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	8956	junction_2	35948.4417459901	NA	2	NA	TRUE	NA	NA	NA	C	coding	1690	5073	241	5313	30.0	49	True	AATAAA	-14
PB.9338.1	chr5	-	2378	5	full-splice_match	CETN3	ENST00000283122.7	2432	5	31	23	2	-23	multi-exon	FALSE	canonical	1	421510	junction_1	44822.809380381324	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	95	598	70.0	-3	True	AATATA	-19
PB.8648.9	chr4	-	4217	27	novel_in_catalog	GAK	novel	2281	2	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	13708	junction_3	137815.39488388618	NA	2	1	TRUE	NA	NA	NA	C	coding	1236	3711	112	3822	10.0	17	True	ATTAAA	-14
PB.8648.8	chr4	-	4231	25	novel_not_in_catalog	GAK	novel	2281	2	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1896	junction_8	157902.05623832115	NA	2	NA	TRUE	NA	NA	NA	C	coding	1231	3696	141	3836	10.0	-12	True	ATTAAA	-14
PB.11617.14	chr9	-	6278	1	genic	TLE1	novel	NA	NA	NA	NA	-211	-49770	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	coding	151	456	1	456	85.0	0	True	NA	NA
PB.11617.12	chr9	-	2611	7	incomplete-splice_match	TLE1	ENST00000376499.7	3893	20	-345	49790	-345	-4	3prime_fragment	FALSE	canonical	1	20601	junction_2	19842.31891690082	NA	0	NA	TRUE	NA	NA	NA	B	coding	200	603	1411	2013	5.0	-29	False	AATAAA	-14
PB.11473.2	chr9	-	1514	9	novel_in_catalog	PLIN2	novel	790	3	NA	NA	-2	-158	combination_of_known_junctions	FALSE	canonical	1	78411	junction_1	300521.89897732495	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	97	1434	30.0	-1	True	ATTAAA	-26
PB.3109.1	chr13	-	5557	7	full-splice_match	SMAD9	ENST00000379826.4	5592	7	34	1	0	-1	multi-exon	FALSE	canonical	1	10937	junction_6	18025.759102523873	NA	9	1	TRUE	NA	NA	NA	A	coding	467	1404	310	1713	10.0	-1	True	AATAAA	-16
PB.8648.1	chr4	-	4413	28	novel_in_catalog	GAK	novel	2281	2	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	21216	junction_3	137871.34295975135	NA	5	NA	TRUE	NA	NA	NA	C	coding	1170	3513	180	3692	10.0	25	False	ATTAAA	-17
PB.4211.2	chr16	+	3417	4	incomplete-splice_match	DNASE1	ENST00000570769.5	2732	12	20	4289	20	1692	3prime_fragment	FALSE	canonical	1	13428	junction_3	12509.543903223117	NA	1	NA	TRUE	NA	NA	NA	B	coding	110	333	548	880	100.0	-17	True	NA	NA
PB.4211.1	chr16	+	3726	4	incomplete-splice_match	DNASE1	ENST00000570769.5	2732	12	15	3985	15	-1946	3prime_fragment	FALSE	canonical	1	13428	junction_3	12509.543903223117	NA	1	NA	TRUE	NA	NA	NA	B	coding	110	333	553	885	75.0	-22	True	NA	NA
PB.8648.2	chr4	-	4553	28	full-splice_match	GAK	ENST00000314167.8	4442	28	-110	-1	-35	0	multi-exon	FALSE	canonical	1	107040	junction_23	116176.26025721667	NA	1	NA	TRUE	NA	NA	NA	C	coding	1311	3936	222	4157	5.0	-17	False	ATTAAA	-15
PB.8648.5	chr4	-	4620	29	novel_in_catalog	GAK	novel	2281	2	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	12730	junction_4	151822.30435010957	NA	1	1	TRUE	NA	NA	NA	C	coding	1344	4035	191	4225	10.0	14	False	ATTAAA	-14
PB.8648.4	chr4	-	4439	28	novel_in_catalog	GAK	novel	2281	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	107040	junction_23	120338.71615538337	NA	1	NA	TRUE	NA	NA	NA	C	coding	1300	3903	141	4043	5.0	-12	True	ATTAAA	-15
PB.8648.7	chr4	-	4309	27	novel_in_catalog	GAK	novel	2281	2	NA	NA	5	0	no_combination_of_known_junctions	FALSE	canonical	1	18939	junction_8	138008.57275818585	NA	0	NA	TRUE	NA	NA	NA	C	coding	1262	3789	126	3914	10.0	3	True	ATTAAA	-14
PB.8648.6	chr4	-	4311	27	novel_in_catalog	GAK	novel	2281	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7763	junction_4	142392.2493242204	NA	0	NA	TRUE	NA	NA	NA	C	coding	1261	3786	131	3916	10.0	-2	True	ATTAAA	-14
PB.10143.13	chr6	-	3215	7	novel_in_catalog	OSTM1	novel	4467	6	NA	NA	1	-1349	combination_of_known_junctions	FALSE	canonical	1	1789	junction_5	168174.52026590315	NA	0	NA	TRUE	NA	NA	NA	C	coding	187	564	688	1251	20.0	-22	True	AATAAA	-17
PB.10143.12	chr6	-	2911	7	novel_not_in_catalog	OSTM1	novel	4467	6	NA	NA	17	-1348	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	135308.66001161525	NA	5	NA	TRUE	NA	NA	NA	C	coding	187	564	383	946	25.0	-2	True	AATAAA	-18
PB.4953.8	chr17	-	3100	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	-25	-2454	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	1	1	TRUE	NA	NA	NA	C	coding	509	1530	88	1617	95.0	-1	True	NA	NA
PB.4953.9	chr17	-	2649	4	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	22	-2454	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45940.68059525844	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	352	1140	95.0	22	False	NA	NA
PB.10143.17	chr6	-	2868	7	novel_in_catalog	OSTM1	novel	4467	6	NA	NA	1	1316	combination_of_known_junctions	FALSE	canonical	1	9521	junction_3	153828.36988778543	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	90	914	50.0	-22	True	TATAAA	-16
PB.10143.16	chr6	-	2963	7	novel_in_catalog	OSTM1	novel	4467	6	NA	NA	7	1316	combination_of_known_junctions	FALSE	canonical	1	1789	junction_5	168174.52026590315	NA	1	1	TRUE	NA	NA	NA	C	coding	187	564	678	1241	50.0	-12	True	TATAAA	-16
PB.10143.15	chr6	-	2917	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	-2	1552	-2	1418	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	89	1093	30.0	-21	True	AATAGA	-30
PB.10143.14	chr6	-	3117	7	novel_in_catalog	OSTM1	novel	4467	6	NA	NA	-6	-1349	combination_of_known_junctions	FALSE	canonical	1	9521	junction_3	153828.36988778543	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	97	921	20.0	-29	True	AATAAA	-17
PB.4953.2	chr17	-	5387	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	68	1597	25.0	19	True	AATAAA	-19
PB.10143.19	chr6	-	2809	6	full-splice_match	OSTM1	ENST00000193322.7	4467	6	3	1655	3	1315	multi-exon	FALSE	canonical	1	220631	junction_5	68098.46275386839	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	84	1088	50.0	-16	True	TATAAA	-15
PB.4953.1	chr17	-	4777	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	-25	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	7	NA	TRUE	NA	NA	NA	C	coding	509	1530	88	1617	15.0	-1	True	AATAAA	-23
PB.4953.6	chr17	-	4114	10	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	10	-2453	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	37151.26802614707	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	53	1582	90.0	34	True	NA	NA
PB.4953.7	chr17	-	3112	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	-8	-2454	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	2	1	TRUE	NA	NA	NA	C	coding	509	1530	71	1600	95.0	16	True	NA	NA
PB.4953.4	chr17	-	3477	9	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	31748.33987785818	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	53	1090	25.0	34	True	AATAAA	-17
PB.4953.5	chr17	-	3022	4	novel_not_in_catalog	IKZF3	novel	9667	8	NA	NA	212	-1721	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	45940.68059525844	NA	2	NA	TRUE	NA	NA	NA	C	coding	262	789	162	950	5.0	212	False	AATAAA	-18
PB.1705.10	chr10	-	2266	10	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	-8	39	no_combination_of_known_junctions	FALSE	canonical	1	16178	junction_9	143678.59092355333	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	310	1647	85.0	-5	True	AGTAAA	-16
PB.1705.11	chr10	-	2127	10	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	112	39	combination_of_known_junctions	FALSE	canonical	1	56753	junction_9	138430.3281068776	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	171	1508	85.0	-4	True	AGTAAA	-16
PB.1705.12	chr10	-	2008	10	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	-15	-29	no_combination_of_known_junctions	FALSE	canonical	1	16178	junction_9	143678.59092355333	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	317	1654	80.0	-12	True	NA	NA
PB.1705.13	chr10	-	1994	11	novel_in_catalog	CTBP2	novel	6939	11	NA	NA	4	-29	no_combination_of_known_junctions	FALSE	canonical	1	5189	junction_10	138198.78833824847	NA	1	1	TRUE	NA	NA	NA	C	coding	445	1338	303	1640	80.0	3	True	NA	NA
PB.1705.14	chr10	-	2035	11	full-splice_match	CTBP2	ENST00000411419.6	2036	11	-28	29	7	-29	multi-exon	FALSE	canonical	1	31980	junction_10	134734.16836159266	NA	16	1	TRUE	NA	NA	NA	C	coding	445	1338	434	1771	60.0	6	False	NA	NA
PB.5895.3	chr19	+	1118	7	full-splice_match	POP4	ENST00000585603.5	3385	7	2266	1	0	-1	multi-exon	FALSE	canonical	1	339913	junction_1	89945.26054665445	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	37	699	30.0	0	True	AATAAA	-15
PB.2727.11	chr12	+	2888	21	full-splice_match	TBK1	ENST00000331710.9	3256	21	258	110	-52	-110	multi-exon	FALSE	canonical	1	120569	junction_1	81566.3139466747	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	82	2271	40.0	0	True	ATTAAA	-28
PB.2727.10	chr12	+	3202	22	novel_not_in_catalog	TBK1	novel	3256	21	NA	NA	-52	-3	any annotated donor/acceptor	FALSE	canonical	1	321	junction_6	115062.07108359101	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	1075	2478	35.0	0	True	AATAAA	-12
PB.9203.1	chr5	+	2946	9	full-splice_match	CCDC152	ENST00000361970.9	3431	9	41	444	24	-444	multi-exon	FALSE	canonical	1	43184	junction_7	6225.463235776114	NA	1	NA	TRUE	NA	NA	NA	A	coding	254	765	47	811	85.0	24	True	NA	NA
PB.90.9	chr1	-	2494	6	incomplete-splice_match	MTOR	ENST00000361445.8	8677	58	-32	145759	-32	-113340	3prime_fragment	FALSE	canonical	1	105706	junction_5	54462.849204205246	NA	3	NA	TRUE	NA	NA	NA	C	coding	316	951	110	1060	85.0	11	True	NA	NA
PB.11641.1	chr9	-	4684	18	novel_in_catalog	SEMA4D	novel	4258	19	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	43754	junction_17	100455.51905778771	NA	1	NA	TRUE	NA	NA	NA	C	coding	860	2583	634	3216	25.0	-10	True	AATAAA	-20
PB.465.24	chr1	-	3283	7	novel_not_in_catalog	SERBP1	novel	6676	8	NA	NA	-3	17	any annotated donor/acceptor	FALSE	canonical	1	3440	junction_5	268553.0586181042	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	732	1097	20.0	-1	True	CATAAA	-15
PB.465.27	chr1	-	3404	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	27	3245	-2	-17	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	73	1	TRUE	NA	NA	NA	C	coding	387	1164	89	1252	45.0	29	False	AATAAA	-17
PB.465.20	chr1	-	3325	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	143	3208	100	20	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	1	1	TRUE	NA	NA	NA	C	coding	209	630	507	1136	15.0	145	False	CATAAA	-18
PB.465.21	chr1	-	3284	8	full-splice_match	SERBP1	ENST00000370995.6	3482	8	182	16	168	-16	multi-exon	FALSE	canonical	1	1067	junction_5	414563.6571731482	NA	2	NA	TRUE	NA	NA	NA	C	coding	230	693	439	1131	50.0	213	False	AATAAA	-18
PB.465.22	chr1	-	3429	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	16	-1342	3	-5	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	108	2	TRUE	NA	NA	NA	C	coding	393	1182	84	1265	60.0	34	False	AATAAA	-29
PB.465.23	chr1	-	3458	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-22	-1815	5	-14	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	95	1303	50.0	23	False	AATAAA	-20
PB.9439.5	chr5	-	2794	8	novel_in_catalog	IRF1	novel	3579	10	NA	NA	4	0	intron_retention	FALSE	canonical	1	316922	junction_7	181774.5807537569	NA	2	NA	TRUE	NA	NA	NA	B	coding	308	927	235	1161	15.0	-1	True	AGTAAA	-8
PB.11641.2	chr9	-	4476	15	novel_in_catalog	SEMA4D	novel	4258	19	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	1	17139	junction_14	83165.42080414559	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	426	3008	25.0	50	False	AATAAA	-20
PB.11818.2	chr9	-	3522	26	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	-11	538	combination_of_known_junctions	FALSE	canonical	1	189214	junction_24	124862.77477867613	NA	0	NA	TRUE	NA	NA	NA	C	coding	990	2973	12	2984	80.0	0	True	NA	NA
PB.9165.1	chr5	-	5038	17	novel_not_in_catalog	MTMR12	novel	4966	15	NA	NA	10	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	65286.68030164035	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	122	2365	20.0	28	False	ATTAAA	-16
PB.4557.1	chr16	-	3346	1	genic	TMEM231P1	novel	NA	NA	NA	NA	-1078	-9355	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	198	597	104	700	25.0	-79	False	ATTAAA	-10
PB.5889.1	chr19	+	2595	1	novel_in_catalog	ZNF726	novel	806	4	NA	NA	-3	-4060	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	1	True	NA	NA
PB.6203.4	chr19	+	2878	10	novel_in_catalog	PRPF31	novel	2269	13	NA	NA	8	0	intron_retention	FALSE	canonical	1	191097	junction_1	275443.0908623457	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	45	605	20.0	-9	True	ATTAAA	-12
PB.6203.5	chr19	+	2240	14	novel_not_in_catalog	PRPF31	novel	2269	13	NA	NA	11	0	any annotated donor/acceptor	FALSE	canonical	1	286	junction_9	308168.75047060725	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	42	1148	20.0	-6	True	ATTAAA	-12
PB.6203.6	chr19	+	1922	13	novel_in_catalog	PRPF31	novel	2269	13	NA	NA	11	0	intron_retention	FALSE	canonical	1	191097	junction_1	239298.5142887552	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	42	1118	20.0	-6	True	ATTAAA	-12
PB.6203.7	chr19	+	2694	11	novel_in_catalog	PRPF31	novel	2269	13	NA	NA	-11	0	intron_retention	FALSE	canonical	1	191097	junction_1	261583.0950589888	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	39	1115	15.0	-3	True	ATTAAA	-22
PB.8957.6	chr4	+	3095	9	novel_in_catalog	AC093752.1	novel	605	3	NA	NA	-2	1395	combination_of_known_junctions	FALSE	canonical	1	67038	junction_4	30995.744885387092	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	2	True	NA	NA
PB.6203.1	chr19	+	1929	13	full-splice_match	PRPF31	ENST00000419967.5	2269	13	330	10	-14	0	multi-exon	FALSE	canonical	1	191097	junction_1	241408.01326021279	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	67	1542	20.0	-31	False	ATTAAA	-12
PB.6203.2	chr19	+	2620	12	novel_in_catalog	PRPF31	novel	2269	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	191097	junction_1	249449.89100723347	NA	1	NA	TRUE	NA	NA	NA	C	coding	358	1077	51	1127	15.0	-15	True	ATTAAA	-22
PB.6203.3	chr19	+	1833	14	full-splice_match	PRPF31	ENST00000321030.8	2126	14	301	-8	4	-2	multi-exon	FALSE	canonical	1	191097	junction_1	231954.58055166624	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	49	1548	15.0	-13	True	ATTAAA	-20
PB.8957.8	chr4	+	4312	10	novel_not_in_catalog	AC093752.1	novel	605	3	NA	NA	8	4125	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	44083.485710581714	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	31	True	NA	NA
PB.8957.9	chr4	+	3179	6	novel_not_in_catalog	AC093752.1	novel	605	3	NA	NA	8	-11096	any annotated donor/acceptor	FALSE	canonical	1	7426	junction_5	38412.76666422246	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	31	True	NA	NA
PB.6203.8	chr19	+	2010	12	novel_in_catalog	PRPF31	novel	2269	13	NA	NA	-6	0	intron_retention	FALSE	canonical	1	191097	junction_1	249869.96161358984	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	34	1110	15.0	2	True	ATTAAA	-22
PB.11098.19	chr8	+	3485	11	full-splice_match	TACC1	ENST00000276520.12	6513	11	-26	3054	-26	-801	multi-exon	FALSE	canonical	1	38424	junction_1	175121.62267661293	NA	2	NA	TRUE	NA	NA	NA	C	coding	395	1188	347	1534	0.0	0	True	AAGAAA	-19
PB.11098.18	chr8	+	4628	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-27	-802	combination_of_known_junctions	FALSE	canonical	1	188558	junction_1	141990.6350805446	NA	2	NA	TRUE	NA	NA	NA	C	coding	776	2331	348	2678	0.0	-1	True	AAGAAA	-18
PB.11839.2	chr9	+	2168	8	full-splice_match	DOLPP1	ENST00000372546.8	2177	8	11	-2	0	-1	multi-exon	FALSE	canonical	1	170762	junction_5	20452.421628985547	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	22	738	20.0	-10	True	AATAAA	-16
PB.11839.3	chr9	+	2039	7	full-splice_match	DOLPP1	ENST00000406974.7	2037	7	0	-2	0	-1	multi-exon	FALSE	canonical	1	25015	junction_5	72751.6430253564	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	22	609	20.0	-10	True	AATAAA	-16
PB.11098.13	chr8	+	3824	13	full-splice_match	TACC1	ENST00000317827.8	7802	13	30	3948	-29	559	multi-exon	FALSE	canonical	1	188558	junction_1	141129.10505298176	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	350	2767	35.0	-3	True	ATTAAA	-34
PB.11839.1	chr9	+	2278	7	novel_in_catalog	DOLPP1	novel	2177	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	170762	junction_4	22055.5723243709	NA	4	NA	TRUE	NA	NA	NA	C	coding	140	423	429	851	15.0	-8044	False	AATAAA	-13
PB.11098.15	chr8	+	3727	11	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-397	0	combination_of_known_junctions	FALSE	canonical	1	38424	junction_1	175993.6746498578	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	244	975	100.0	168	False	NA	NA
PB.11098.14	chr8	+	2778	13	novel_in_catalog	TACC1	novel	5510	13	NA	NA	-29	-11	combination_of_known_junctions	FALSE	canonical	1	188558	junction_1	141990.6350805446	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	350	2680	85.0	-3	True	NA	NA
PB.11098.17	chr8	+	4716	13	full-splice_match	TACC1	ENST00000317827.8	7802	13	32	3054	-27	-801	multi-exon	FALSE	canonical	1	188558	junction_1	141129.10505298176	NA	4	NA	TRUE	NA	NA	NA	C	coding	805	2418	348	2765	0.0	-1	True	AAGAAA	-19
PB.314.1	chr1	-	4005	6	incomplete-splice_match	BMP8B	ENST00000372827.7	4822	7	13929	1	13929	-1	5prime_fragment	FALSE	canonical	1	336	junction_4	15768.228123666908	NA	2	NA	TRUE	NA	NA	NA	A	coding	238	717	53	769	25.0	NA	False	ATTAAA	-17
PB.10542.8	chr7	-	3556	5	novel_in_catalog	FIGNL1	novel	3471	4	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	4932	junction_3	24926.133259091752	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	405	2429	20.0	-3	True	ATTAAA	-16
PB.10542.9	chr7	-	4753	3	novel_in_catalog	FIGNL1	novel	3471	4	NA	NA	1	-4	intron_retention	FALSE	canonical	1	74981	junction_2	24656.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	1603	3627	20.0	0	True	ATTAAA	-15
PB.10542.2	chr7	-	3569	4	novel_in_catalog	FIGNL1	novel	3471	4	NA	NA	2	0	intron_retention	FALSE	canonical	1	11057	junction_2	46356.9099655656	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	410	2434	20.0	-17	True	ATTAAA	-24
PB.10542.3	chr7	-	3585	5	novel_in_catalog	FIGNL1	novel	3471	4	NA	NA	-8	0	intron_retention	FALSE	canonical	1	16730	junction_3	21372.312380741583	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	427	2451	20.0	-9	True	ATTAAA	-23
PB.10542.1	chr7	-	3959	4	full-splice_match	FIGNL1	ENST00000433017.5	3626	4	16	-349	-6	0	multi-exon	FALSE	canonical	1	26003	junction_2	40127.21040502179	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	800	2824	20.0	-25	False	ATTAAA	-24
PB.10542.6	chr7	-	3523	4	novel_in_catalog	FIGNL1	novel	3471	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	7069	junction_2	48057.27177950168	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	700	2391	20.0	-19	True	ATTAAA	-21
PB.10542.7	chr7	-	4031	5	novel_in_catalog	FIGNL1	novel	3471	4	NA	NA	2	-3	intron_retention	FALSE	canonical	1	26003	junction_3	19081.12165695455	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	880	2904	20.0	-17	True	ATTAAA	-16
PB.10542.4	chr7	-	3489	4	full-splice_match	FIGNL1	ENST00000395556.6	3485	4	0	-4	0	0	multi-exon	FALSE	canonical	1	16730	junction_2	43963.32444461204	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	664	2355	20.0	-1	True	ATTAAA	-23
PB.10542.5	chr7	-	3334	3	full-splice_match	FIGNL1	ENST00000615084.4	3368	3	34	0	-6	0	multi-exon	FALSE	canonical	1	23189	junction_2	50552.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	176	2200	20.0	-7	True	ATTAAA	-23
PB.3853.10	chr15	-	2996	20	incomplete-splice_match	CEP152	ENST00000399334.7	5097	26	-82	18217	7	12605	3prime_fragment	FALSE	canonical	1	58024	junction_13	15961.038938094836	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2880	117	2996	70.0	-1	True	NA	NA
PB.3853.11	chr15	-	2859	20	incomplete-splice_match	CEP152	ENST00000399334.7	5097	26	-82	18354	7	12468	3prime_fragment	FALSE	canonical	1	58024	junction_13	15961.038938094836	NA	0	NA	TRUE	NA	NA	NA	C	coding	914	2742	117	2858	65.0	-1	True	NA	NA
PB.3853.12	chr15	-	2010	14	incomplete-splice_match	CEP152	ENST00000399334.7	5097	26	-82	30819	7	3	3prime_fragment	FALSE	canonical	1	58024	junction_7	12687.045722301284	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1893	117	2009	50.0	-1	True	AATGAA	-14
PB.3853.13	chr15	-	1878	13	full-splice_match	CEP152	ENST00000560322.5	1947	13	67	2	0	-2	multi-exon	FALSE	canonical	1	58024	junction_6	12520.961862901038	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1752	127	1878	60.0	-11	True	AAGAAA	-22
PB.3853.14	chr15	-	5517	1	novel_in_catalog	CEP152	novel	5635	27	NA	NA	7	-33	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.10092.29	chr6	-	2041	12	novel_in_catalog	AL589666.1	novel	835	8	NA	NA	-28621	-54670	no_combination_of_known_junctions	FALSE	canonical	1	28014	junction_11	358520.1212733181	NA	0	NA	TRUE	NA	NA	NA	B	coding	562	1689	119	1807	50.0	11	True	ATTAAA	-20
PB.2905.1	chr12	+	5173	8	novel_not_in_catalog	SH2B3	novel	5406	8	NA	NA	-923	-3	any annotated donor/acceptor	FALSE	canonical	1	5312	junction_1	97973.78351792037	NA	0	NA	TRUE	NA	NA	NA	B	coding	575	1728	128	1855	25.0	-5	True	ATTAAA	-16
PB.3444.14	chr14	-	3353	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	191	2059	7	0	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	2	NA	TRUE	NA	NA	NA	C	coding	625	1878	735	2612	35.0	222	False	ATTAAA	-16
PB.3444.15	chr14	-	3457	11	novel_in_catalog	DDHD1	novel	12339	14	NA	NA	-34	8	intron_retention	FALSE	canonical	1	13823	junction_9	106584.74425845381	NA	2	NA	TRUE	NA	NA	NA	C	coding	829	2490	219	2708	45.0	-3	True	ATTAAA	-24
PB.3444.16	chr14	-	3745	14	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	-14	1	intron_retention	FALSE	canonical	1	7308	junction_12	105195.78739546312	NA	2	NA	TRUE	NA	NA	NA	C	coding	934	2805	199	3003	30.0	17	True	ATTAAA	-17
PB.3444.17	chr14	-	3489	12	novel_in_catalog	DDHD1	novel	12339	14	NA	NA	10	0	intron_retention	FALSE	canonical	1	13823	junction_10	106712.36387342634	NA	4	NA	TRUE	NA	NA	NA	C	coding	857	2574	175	2748	35.0	41	True	ATTAAA	-16
PB.3444.10	chr14	-	5003	11	novel_in_catalog	DDHD1	novel	12339	14	NA	NA	-31	-502	intron_retention	FALSE	canonical	1	13823	junction_9	106584.74425845381	NA	3	NA	TRUE	NA	NA	NA	C	coding	829	2490	216	2705	35.0	0	True	NA	NA
PB.3444.11	chr14	-	4453	13	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	-31	789	intron_retention	FALSE	canonical	1	29	junction_1	103816.73399219199	NA	5	1	TRUE	NA	NA	NA	C	coding	882	2649	216	2864	75.0	0	True	NA	NA
PB.3444.12	chr14	-	4366	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	-34	1271	-34	788	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	3	NA	TRUE	NA	NA	NA	C	coding	872	2619	219	2837	80.0	-3	True	NA	NA
PB.3444.13	chr14	-	3666	13	full-splice_match	DDHD1	ENST00000323669.9	5503	13	-221	2058	-37	1	multi-exon	FALSE	canonical	1	70289	junction_1	96433.06224253289	NA	2	NA	TRUE	NA	NA	NA	C	coding	900	2703	222	2924	30.0	-6	True	ATTAAA	-17
PB.7076.17	chr2	+	2596	21	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	-2	-14	combination_of_known_junctions	FALSE	canonical	1	5484	junction_2	110063.35504711593	NA	1	1	TRUE	NA	NA	NA	C	coding	772	2316	280	2595	60.0	5	True	NA	NA
PB.1766.3	chr11	-	3694	20	novel_in_catalog	CARS	novel	2758	23	NA	NA	-4	0	intron_retention	FALSE	canonical	1	328066	junction_19	123507.33527982229	NA	2	NA	TRUE	NA	NA	NA	C	coding	683	2052	56	2107	10.0	-5	True	AATAAA	-16
PB.3528.25	chr14	+	2125	8	full-splice_match	SRSF5	ENST00000555547.5	2057	8	-44	-24	-15	24	multi-exon	FALSE	canonical	1	49004	junction_5	1728098.4604015253	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1471	1908	20.0	0	True	ATTAAA	-24
PB.1766.1	chr11	-	2990	21	novel_in_catalog	CARS	novel	2758	23	NA	NA	0	1	intron_retention	FALSE	canonical	1	288034	junction_1	132317.38644345838	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	63	2114	5.0	-12	True	AATAAA	-18
PB.3528.27	chr14	+	3282	6	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-14	-6	intron_retention	FALSE	canonical	1	544887	junction_1	1748394.9622437602	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	258	632	25.0	1	True	AATAAA	-8
PB.1766.7	chr11	-	2749	22	novel_in_catalog	CARS	novel	2758	23	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	4238	junction_14	177462.57361036073	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	1361	2491	10.0	23	True	AATAAA	-16
PB.1766.6	chr11	-	2791	23	novel_in_catalog	CARS	novel	2758	23	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	43654	junction_20	209219.2053835853	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1989	545	2533	10.0	-6	True	AATAAA	-16
PB.1766.5	chr11	-	2729	23	full-splice_match	CARS	ENST00000380525.8	2758	23	21	8	0	0	multi-exon	FALSE	canonical	1	57720	junction_21	185089.52061434468	NA	1	1	TRUE	NA	NA	NA	C	coding	831	2496	50	2545	10.0	1	True	AATAAA	-16
PB.1766.4	chr11	-	2883	20	novel_in_catalog	CARS	novel	2758	23	NA	NA	3	0	intron_retention	FALSE	canonical	1	1428	junction_3	168102.66964948928	NA	15	3	TRUE	NA	NA	NA	C	coding	656	1971	47	2017	10.0	4	True	AATAAA	-16
PB.11490.1	chr9	+	2129	20	full-splice_match	IFT74	ENST00000380062.9	2160	20	27	4	-12	1	multi-exon	FALSE	canonical	1	97047	junction_2	27771.75973155568	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	137	1939	30.0	-19	True	AATAAA	-15
PB.1766.9	chr11	-	2608	22	novel_in_catalog	CARS	novel	2758	23	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	24706	junction_2	163978.8559207954	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	57	2117	10.0	-6	True	AATAAA	-16
PB.1766.8	chr11	-	2473	22	full-splice_match	CARS	ENST00000397111.9	2685	22	204	8	7	0	multi-exon	FALSE	canonical	1	328066	junction_21	127122.62041279979	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	43	2289	10.0	8	True	AATAAA	-16
PB.3528.28	chr14	+	2334	7	novel_in_catalog	SRSF5	novel	2815	9	NA	NA	-28	12	intron_retention	FALSE	canonical	1	23312	junction_1	1779465.359987157	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	1692	2129	20.0	7	True	ATTAAA	-12
PB.11490.4	chr9	+	2554	24	novel_not_in_catalog	IFT74	novel	652	7	NA	NA	-26	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_9	73850.99668377635	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	934	1902	35.0	-33	False	AATAAA	-13
PB.11700.18	chr9	+	4421	15	novel_in_catalog	SLC44A1	novel	9640	16	NA	NA	0	-4619	intron_retention	FALSE	canonical	1	13506	junction_2	167892.6550084935	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	729	2078	40.0	-29	True	AATAAA	-13
PB.4256.2	chr16	+	2146	2	incomplete-splice_match	TNFRSF17	ENST00000053243.5	994	3	77	-1	-29	1	intron_retention	FALSE	canonical	1	251788	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	109	330	142	471	30.0	13	True	ATTAAA	-18
PB.10022.4	chr6	-	3664	6	full-splice_match	TNFRSF21	ENST00000296861.2	3595	6	-71	2	-71	-2	multi-exon	FALSE	canonical	1	285390	junction_5	107960.65832811507	NA	8	NA	TRUE	NA	NA	NA	C	coding	655	1968	466	2433	30.0	28	False	AATAAA	-15
PB.10022.7	chr6	-	3438	6	full-splice_match	TNFRSF21	ENST00000296861.2	3595	6	-41	198	-41	-198	multi-exon	FALSE	canonical	1	285390	junction_5	107960.65832811507	NA	1	NA	TRUE	NA	NA	NA	C	coding	655	1968	436	2403	35.0	-3	True	ATTAAA	-16
PB.10022.6	chr6	-	5109	5	novel_in_catalog	TNFRSF21	novel	3595	6	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	285390	junction_4	73479.38218643377	NA	2	NA	TRUE	NA	NA	NA	C	coding	405	1218	2661	3878	30.0	-6	True	AATAAA	-15
PB.10022.1	chr6	-	3482	6	novel_not_in_catalog	TNFRSF21	novel	3595	6	NA	NA	-5	2	any annotated donor/acceptor	FALSE	canonical	1	536	junction_2	182115.25909533227	NA	3	NA	TRUE	NA	NA	NA	C	coding	615	1848	400	2247	30.0	-6	True	AATAAA	-19
PB.10022.3	chr6	-	3625	6	novel_not_in_catalog	TNFRSF21	novel	3595	6	NA	NA	-71	-1	any annotated donor/acceptor	FALSE	canonical	1	5212	junction_4	155434.19321758003	NA	3	NA	TRUE	NA	NA	NA	C	coding	340	1023	1371	2393	35.0	28	False	AATAAA	-16
PB.10022.2	chr6	-	2477	4	novel_in_catalog	TNFRSF21	novel	3595	6	NA	NA	-28	1	no_combination_of_known_junctions	FALSE	canonical	1	3522	junction_3	197894.88144354706	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	767	1243	30.0	10	True	AATAAA	-18
PB.10163.9	chr6	-	4949	13	incomplete-splice_match	REV3L	ENST00000368802.7	10701	32	44	74654	44	14061	3prime_fragment	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	1	NA	TRUE	NA	NA	NA	C	coding	1556	4668	280	4947	45.0	-1	True	AATAAA	-9
PB.10163.8	chr6	-	5120	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	505	74633	1	14061	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	5	NA	TRUE	NA	NA	NA	C	coding	1478	4434	685	5118	45.0	5	True	AATAAA	-9
PB.10616.6	chr7	+	4436	8	novel_in_catalog	TRIM73	novel	1321	7	NA	NA	8733	5791	intron_retention	FALSE	canonical	1	1162	junction_1	115699.11612877426	NA	1	NA	TRUE	NA	NA	NA	B	coding	163	492	3577	4068	30.0	-10	False	AATAAA	-18
PB.10163.2	chr6	-	10685	32	full-splice_match	REV3L	ENST00000368802.7	10701	32	-5	21	-5	0	multi-exon	FALSE	canonical	1	39115	junction_31	34431.10129259015	NA	32	NA	TRUE	NA	NA	NA	C	coding	3130	9393	329	9721	70.0	-1	True	TTTAAA	-30
PB.3072.1	chr13	-	1018	5	full-splice_match	MTIF3	ENST00000381120.7	1005	5	-16	3	1	-3	multi-exon	FALSE	canonical	1	253060	junction_4	127837.46567125774	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	153	989	15.0	-27	True	AATAAA	-20
PB.3072.2	chr13	-	4501	2	incomplete-splice_match	MTIF3	ENST00000381120.7	1005	5	-16	5095	1	-457	3prime_fragment	FALSE	canonical	1	253060	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-27	True	NA	NA
PB.5413.14	chr18	-	2367	14	incomplete-splice_match	ROCK1	ENST00000635540.1	5656	34	-749	58145	82	36948	3prime_fragment	FALSE	canonical	1	264009	junction_12	74213.81572203162	NA	0	NA	TRUE	NA	NA	NA	B	coding	502	1506	860	2365	60.0	-6	True	AAGAAA	-7
PB.10616.5	chr7	+	1387	7	novel_not_in_catalog	TRIM73	novel	1321	7	NA	NA	8733	5795	intron_retention	FALSE	canonical	1	1162	junction_1	97538.93437779375	NA	0	NA	TRUE	NA	NA	NA	B	coding	163	492	524	1015	25.0	-10	False	AATAAA	-22
PB.5413.12	chr18	-	2706	17	incomplete-splice_match	ROCK1	ENST00000635540.1	5656	34	-660	42935	171	-22929	3prime_fragment	FALSE	canonical	1	264009	junction_15	94267.53342132086	NA	0	NA	TRUE	NA	NA	NA	B	coding	645	1935	771	2705	60.0	-3	True	NA	NA
PB.5413.13	chr18	-	2473	15	novel_not_in_catalog	ROCK1	novel	9484	33	NA	NA	59	36953	any annotated donor/acceptor	FALSE	canonical	1	7117	junction_2	135139.17998147808	NA	0	NA	TRUE	NA	NA	NA	B	coding	530	1590	883	2472	65.0	0	True	AAGAAA	-12
PB.5413.10	chr18	-	2899	18	incomplete-splice_match	ROCK1	ENST00000635540.1	5656	34	-646	41224	185	-21218	3prime_fragment	FALSE	canonical	1	264009	junction_16	91890.38665910522	NA	0	NA	TRUE	NA	NA	NA	B	coding	714	2142	757	2898	30.0	11	True	NA	NA
PB.5413.11	chr18	-	2967	18	novel_not_in_catalog	ROCK1	novel	9484	33	NA	NA	39	-22878	any annotated donor/acceptor	FALSE	canonical	1	7117	junction_5	149538.72350843734	NA	1	NA	TRUE	NA	NA	NA	B	coding	688	2064	903	2966	55.0	-20	True	AAGAAA	-30
PB.8674.4	chr4	-	3135	8	novel_in_catalog	LRPAP1	novel	10598	8	NA	NA	0	365	intron_retention	FALSE	canonical	1	5023	junction_3	746968.0854893826	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	9	1175	10.0	1	True	AATAGA	-17
PB.8674.5	chr4	-	2673	7	novel_in_catalog	LRPAP1	novel	10598	8	NA	NA	-1	362	intron_retention	FALSE	canonical	1	1215187	junction_6	483882.27684691607	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	10	912	10.0	0	True	AATAGA	-14
PB.6434.12	chr2	+	5486	23	full-splice_match	EML4	ENST00000318522.9	5549	23	27	36	-4	-36	multi-exon	FALSE	canonical	1	180220	junction_6	85535.70398430651	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	236	3181	80.0	24	True	NA	NA
PB.3031.8	chr12	+	3332	6	novel_not_in_catalog	ZNF26	novel	733	3	NA	NA	-7	440	any annotated donor/acceptor	FALSE	canonical	1	743	junction_2	36999.35073160068	NA	1	NA	TRUE	NA	NA	NA	C	coding	513	1542	705	2246	0.0	-9	True	AATAAA	-17
PB.8674.2	chr4	-	4113	9	novel_not_in_catalog	LRPAP1	novel	10598	8	NA	NA	-1	3042	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	704372.3254234493	NA	3	NA	TRUE	NA	NA	NA	C	coding	357	1074	10	1083	25.0	0	True	AATACA	-22
PB.8674.3	chr4	-	1441	8	full-splice_match	LRPAP1	ENST00000650182.1	10446	8	0	9005	0	316	multi-exon	FALSE	canonical	1	1215187	junction_7	449591.7433359255	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	11	1084	40.0	-1	True	CATAAA	-23
PB.10379.2	chr7	+	2737	6	novel_not_in_catalog	RNF216P1	novel	659	5	NA	NA	-4	13786	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	84364.31261949569	NA	16	2	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	-17	True	AATAAA	-9
PB.5916.1	chr19	+	2578	5	novel_in_catalog	ZNF302	novel	568	3	NA	NA	2	0	intron_retention	FALSE	canonical	1	4677	junction_1	72168.18613965229	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	225	1424	20.0	-98	False	AATAAA	-34
PB.5916.2	chr19	+	2627	5	full-splice_match	ZNF302	ENST00000423823.6	2590	5	-34	-3	1	0	multi-exon	FALSE	canonical	1	46817	junction_1	54398.32118905417	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	271	1470	15.0	1	True	AATAAA	-37
PB.5916.3	chr19	+	2539	5	full-splice_match	ZNF302	ENST00000457781.6	2600	5	16	45	0	20	multi-exon	FALSE	canonical	1	27277	junction_1	62603.939697813745	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	225	1424	50.0	0	True	AATAAA	-9
PB.5916.4	chr19	+	1648	3	full-splice_match	ZNF302	ENST00000512455.6	568	3	42	-1122	3	-1	multi-exon	FALSE	canonical	1	46817	junction_1	68894.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	297	1351	1647	100.0	3	True	NA	NA
PB.10379.7	chr7	+	2249	7	novel_in_catalog	RNF216P1	novel	659	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	5141	junction_2	67287.56411023429	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	ATTAAA	-18
PB.4681.10	chr17	-	3071	12	novel_in_catalog	MYBBP1A	novel	4104	27	NA	NA	3	757	intron_retention	FALSE	canonical	1	314898	junction_8	70433.25309612272	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	974	2071	75.0	0	True	NA	NA
PB.4681.11	chr17	-	2890	13	incomplete-splice_match	MYBBP1A	ENST00000381556.6	4104	27	26	8031	-2	757	3prime_fragment	FALSE	canonical	1	314898	junction_9	68287.8966807178	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	37	1890	75.0	23	True	NA	NA
PB.8026.3	chr3	-	2936	9	full-splice_match	GORASP1	ENST00000453680.5	2873	9	-57	-6	1	0	multi-exon	FALSE	canonical	1	21469	junction_4	90549.1575623429	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	86	1036	35.0	0	True	AATAAA	-26
PB.9336.1	chr5	+	2597	1	antisense	novelGene_MEF2C_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-4195	False	NA	NA
PB.8026.1	chr3	-	2955	9	novel_in_catalog	GORASP1	novel	3240	8	NA	NA	0	59	no_combination_of_known_junctions	FALSE	canonical	1	11531	junction_4	93063.27659951319	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	87	1319	25.0	-1	True	AATACA	-24
PB.8026.7	chr3	-	2899	9	novel_in_catalog	GORASP1	novel	3240	8	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	3799	junction_4	126435.21745047935	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	489	1331	45.0	7	True	AATAAA	-17
PB.8026.6	chr3	-	3456	9	novel_in_catalog	GORASP1	novel	3240	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	7370	junction_6	93696.83971991799	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	884	1888	45.0	-12	True	AATAAA	-17
PB.8026.5	chr3	-	2918	9	novel_not_in_catalog	GORASP1	novel	3240	8	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	6216	junction_2	90174.44030313898	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	98	1342	35.0	-12	True	AATAAA	-25
PB.8026.4	chr3	-	3599	9	novel_in_catalog	GORASP1	novel	3240	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	6120	junction_6	126632.2394986265	NA	1	NA	TRUE	NA	NA	NA	C	coding	187	564	1460	2023	35.0	-4	True	AATAAA	-25
PB.8026.9	chr3	-	2651	7	full-splice_match	GORASP1	ENST00000479927.5	1345	7	13	-1319	0	-41	multi-exon	FALSE	canonical	1	10265	junction_6	101816.35445524238	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	87	1124	75.0	-1	True	NA	NA
PB.8026.8	chr3	-	2830	6	novel_in_catalog	GORASP1	novel	3240	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	10265	junction_5	111509.43311415406	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	360	1262	45.0	-1	True	AATAAA	-17
PB.5773.1	chr19	-	1774	1	full-splice_match	AC020916.1	ENST00000587762.2	19049	1	6641	10634	6641	-10634	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-1	True	AATAAA	-19
PB.1750.1	chr11	-	2472	10	novel_not_in_catalog	GATD1	novel	446	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	167114.4266792098	NA	5	2	TRUE	NA	NA	NA	B	coding	220	663	22	684	15.0	3	True	NA	NA
PB.1750.2	chr11	-	2518	8	novel_not_in_catalog	GATD1	novel	446	4	NA	NA	-5	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	150850.75063878772	NA	0	NA	TRUE	NA	NA	NA	B	coding	219	660	32	691	20.0	-7	True	NA	NA
PB.6434.13	chr2	+	4493	23	full-splice_match	EML4	ENST00000318522.9	5549	23	36	1020	5	654	multi-exon	FALSE	canonical	1	180220	junction_6	85535.70398430651	NA	4	1	TRUE	NA	NA	NA	C	coding	981	2946	227	3172	15.0	33	True	TATAAA	-14
PB.8080.21	chr3	-	5006	28	full-splice_match	SMARCC1	ENST00000254480.9	6375	28	53	1316	17	1002	multi-exon	FALSE	canonical	1	438864	junction_27	147698.30735901746	NA	3	NA	TRUE	NA	NA	NA	C	coding	1105	3318	68	3385	70.0	28	True	TATAAA	-36
PB.6363.19	chr2	-	2481	20	full-splice_match	HADHA	ENST00000380649.7	3037	20	101	455	1	-31	multi-exon	FALSE	canonical	1	429272	junction_7	396280.2990494554	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	30	2321	15.0	-16	True	ATTAAA	-26
PB.243.2	chr1	+	1715	9	incomplete-splice_match	SERINC2	ENST00000491976.1	2807	11	9969	3	9969	-3	5prime_fragment	FALSE	canonical	1	663885	junction_2	276274.277158135	NA	1	NA	TRUE	NA	NA	NA	C	coding	400	1203	38	1240	15.0	-31	True	AATAAA	-16
PB.8080.26	chr3	-	2603	24	incomplete-splice_match	SMARCC1	ENST00000254480.9	6375	28	52	50029	16	35049	3prime_fragment	FALSE	canonical	1	438864	junction_23	155687.35031807297	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	69	2603	60.0	27	True	AAGAAA	-39
PB.1002.6	chr1	+	2655	16	novel_not_in_catalog	PLA2G4A	novel	2875	18	NA	NA	18321	-8	any annotated donor/acceptor	FALSE	canonical	1	111	junction_1	43714.08885758559	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	214	2190	60.0	NA	False	NA	NA
PB.6363.18	chr2	-	2967	21	novel_in_catalog	HADHA	novel	3037	20	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	1	357	junction_10	476417.846688608	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	1293	2591	10.0	-16	True	AATAAA	-16
PB.243.1	chr1	+	1922	10	full-splice_match	SERINC2	ENST00000373709.7	1997	10	77	-2	77	0	multi-exon	FALSE	canonical	1	314969	junction_1	342796.6719911706	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	74	1441	10.0	-20	True	AATAAA	-22
PB.8080.27	chr3	-	2500	23	incomplete-splice_match	SMARCC1	ENST00000254480.9	6375	28	51	50810	15	34268	3prime_fragment	FALSE	canonical	1	438864	junction_22	151338.1367025687	NA	15	NA	TRUE	NA	NA	NA	C	coding	810	2430	70	2499	70.0	26	True	NA	NA
PB.68.5	chr1	-	3163	11	novel_in_catalog	ENO1	novel	1781	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5131498	junction_9	6293179.039238888	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	1791	2807	15.0	-7	True	AATAAA	-21
PB.7004.7	chr2	-	2056	11	full-splice_match	TMBIM1	ENST00000445635.5	1251	11	0	-805	0	0	multi-exon	FALSE	canonical	1	13390	junction_10	481976.4526246588	NA	1	NA	TRUE	NA	NA	NA	C	coding	137	414	369	782	30.0	-11	True	AATAAA	-18
PB.7071.6	chr2	+	1916	6	full-splice_match	COPS7B	ENST00000413197.5	2442	6	2	524	0	0	multi-exon	FALSE	canonical	1	16815	junction_2	175216.31800331842	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	365	838	15.0	-9	True	AATACA	-20
PB.7004.4	chr2	-	2422	13	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	501	junction_12	623506.1596481525	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	213	1148	30.0	-13	True	AATAAA	-18
PB.8735.8	chr4	-	2826	4	novel_in_catalog	TLR1	novel	619	4	NA	NA	-257	-4	no_combination_of_known_junctions	FALSE	canonical	1	8551	junction_2	16767.073891674983	NA	1	1	TRUE	NA	NA	NA	C	coding	786	2361	256	2616	30.0	566	False	ATTAAA	-42
PB.8735.9	chr4	-	3031	6	novel_not_in_catalog	TLR1	novel	619	4	NA	NA	-162	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	29991.375937759174	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	465	2825	35.0	-1	True	ATTAAA	-38
PB.11650.9	chr9	-	3951	4	full-splice_match	ZNF484	ENST00000332591.6	2836	4	-16	-1099	0	61	multi-exon	FALSE	canonical	1	13556	junction_3	22626.040224091845	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	243	2693	30.0	-1	True	NA	NA
PB.12022.4	chrX	-	2063	5	full-splice_match	DYNLT3	ENST00000432389.2	719	5	132	-1476	132	-231	multi-exon	FALSE	canonical	1	6430	junction_4	73951.5481125987	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	187	555	15.0	350	False	NA	NA
PB.12022.3	chrX	-	1897	5	full-splice_match	DYNLT3	ENST00000378578.8	2217	5	93	227	-30	-227	multi-exon	FALSE	canonical	1	155347	junction_3	13548.487856122541	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	35	385	15.0	-19	True	NA	NA
PB.12022.2	chrX	-	2087	5	full-splice_match	DYNLT3	ENST00000378578.8	2217	5	68	62	-55	-62	multi-exon	FALSE	canonical	1	155347	junction_3	13548.487856122541	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	60	410	15.0	1	True	AAGAAA	-17
PB.12022.1	chrX	-	2237	5	full-splice_match	DYNLT3	ENST00000432389.2	719	5	188	-1706	188	-1	multi-exon	FALSE	canonical	1	6430	junction_4	73951.5481125987	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	131	499	20.0	406	False	AATAAA	-20
PB.6064.6	chr19	+	3115	4	incomplete-splice_match	PVR	ENST00000406449.8	1344	6	-214	3018	-27	-3018	3prime_fragment	FALSE	canonical	1	257556	junction_1	48523.73128686623	NA	4	NA	TRUE	NA	NA	NA	C	coding	281	846	215	1060	75.0	-27	True	NA	NA
PB.11650.3	chr9	-	4790	6	novel_in_catalog	ZNF484	novel	3960	4	NA	NA	2	847	combination_of_known_junctions	FALSE	canonical	1	6672	junction_4	23473.814462928687	NA	5	NA	TRUE	NA	NA	NA	C	coding	816	2451	296	2746	40.0	17	True	NA	NA
PB.7004.2	chr2	-	3150	10	novel_in_catalog	TMBIM1	novel	2371	12	NA	NA	-20	-3	intron_retention	FALSE	canonical	1	523090	junction_8	436947.27266709175	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	1457	1870	20.0	-21	True	AATAAA	-24
PB.8735.2	chr4	-	2983	4	novel_in_catalog	TLR1	novel	619	4	NA	NA	-254	156	no_combination_of_known_junctions	FALSE	canonical	1	8551	junction_2	16767.073891674983	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	253	2613	25.0	-16	True	AATATA	-17
PB.3871.1	chr15	-	1937	1	full-splice_match	AC090970.2	ENST00000612566.1	866	1	-1074	3	-1074	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	754	False	NA	NA
PB.8735.4	chr4	-	3437	5	incomplete-splice_match	TLR1	ENST00000506146.5	555	6	51077	-2392	-162	-11	5prime_fragment	FALSE	canonical	1	10342	junction_4	24628.3998769713	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	900	3260	40.0	-1	True	ATTAAA	-9
PB.8735.5	chr4	-	2820	3	full-splice_match	TLR1	ENST00000515861.5	578	3	60	-2302	-5	-2	multi-exon	FALSE	canonical	1	3097	junction_1	38390.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	786	2361	248	2608	25.0	883	False	ATTAAA	-44
PB.9642.2	chr5	-	1460	8	novel_in_catalog	RAB24	novel	1820	7	NA	NA	-3	0	intron_retention	FALSE	canonical	1	113971	junction_7	229375.41545986952	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	340	894	10.0	5	True	AATAAA	-21
PB.9642.3	chr5	-	1352	8	full-splice_match	RAB24	ENST00000303251.10	1311	8	-29	-12	-4	0	multi-exon	FALSE	canonical	1	470496	junction_3	122037.05097323886	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	450	1061	10.0	0	True	AATAAA	-21
PB.10515.1	chr7	+	2091	3	novel_not_in_catalog	LINC00957	novel	1323	2	NA	NA	-6	170	intron_retention	FALSE	non_canonical	0	0	junction_2	1143.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	113	342	1195	1536	30.0	-7451	False	NA	NA
PB.5316.8	chr17	-	3939	16	full-splice_match	SLC38A10	ENST00000374759.7	4300	16	-21	382	-21	-378	multi-exon	FALSE	canonical	1	218209	junction_10	111789.10479438007	NA	1	NA	TRUE	NA	NA	NA	C	coding	1119	3360	406	3765	15.0	9	False	TATAAA	-20
PB.5316.9	chr17	-	3818	14	full-splice_match	SLC38A10	ENST00000288439.9	2708	14	-49	-1061	-11	742	multi-exon	FALSE	canonical	1	218209	junction_8	110508.0345943467	NA	1	NA	TRUE	NA	NA	NA	C	coding	780	2343	396	2738	10.0	-18	True	AAAAAG	-18
PB.5316.6	chr17	-	4139	15	novel_in_catalog	SLC38A10	novel	4300	16	NA	NA	-1	-1	no_combination_of_known_junctions	TRUE	canonical	1	1953	junction_5	142285.4584030258	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	1840	3588	15.0	-8	True	AATAAA	-14
PB.5316.7	chr17	-	2337	4	novel_not_in_catalog	SLC38A10	novel	4300	16	NA	NA	-17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	186759.7646199226	NA	20	1	TRUE	NA	NA	NA	C	coding	425	1278	509	1786	15.0	14	True	AATAAA	-14
PB.5316.4	chr17	-	4181	15	novel_in_catalog	SLC38A10	novel	4300	16	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	6485	junction_7	158785.51153417106	NA	3	1	TRUE	NA	NA	NA	C	coding	699	2100	1527	3626	10.0	-1	True	AATAAA	-18
PB.5316.2	chr17	-	4318	17	novel_in_catalog	SLC38A10	novel	4300	16	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	6512	junction_3	173712.36647039867	NA	2	NA	TRUE	NA	NA	NA	C	coding	1127	3384	378	3761	5.0	0	True	AATAAA	-20
PB.5316.3	chr17	-	4038	16	full-splice_match	SLC38A10	ENST00000374759.7	4300	16	256	6	-135	-2	multi-exon	FALSE	canonical	1	218209	junction_10	111789.10479438007	NA	1	NA	TRUE	NA	NA	NA	C	coding	1119	3360	129	3488	15.0	-3	True	AATAAA	-13
PB.5316.1	chr17	-	4486	16	full-splice_match	SLC38A10	ENST00000374759.7	4300	16	1	-187	1	187	multi-exon	TRUE	canonical	1	218209	junction_10	111789.10479438007	NA	3	NA	TRUE	NA	NA	NA	C	coding	1119	3360	384	3743	20.0	-6	True	AGTAAA	-19
PB.1176.2	chr1	+	3445	2	novel_not_in_catalog	ARF1	novel	1972	5	NA	NA	-22	-10684	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-14	True	NA	NA
PB.11314.3	chr8	-	1563	9	full-splice_match	DSCC1	ENST00000313655.4	2314	9	73	678	73	-678	multi-exon	FALSE	canonical	1	136623	junction_5	40757.86216179647	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	143	1324	20.0	-80	True	NA	NA
PB.8010.8	chr3	+	2372	18	novel_in_catalog	MLH1	novel	2752	19	NA	NA	8	-4	no_combination_of_known_junctions	FALSE	canonical	1	1297	junction_3	133656.0679812466	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	280	2187	40.0	0	True	AATAAA	-12
PB.8010.9	chr3	+	2589	19	novel_not_in_catalog	MLH1	novel	2752	19	NA	NA	-9	-4	any annotated donor/acceptor	FALSE	canonical	1	1703	junction_1	109246.90102675963	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	206	2404	40.0	4	True	AATAAA	-12
PB.1002.4	chr1	+	1651	1	novel_in_catalog	PLA2G4A	novel	2875	18	NA	NA	5	-108622	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-32	True	NA	NA
PB.1176.3	chr1	+	2051	3	incomplete-splice_match	ARF1	ENST00000470670.5	712	4	-22	-1181	-22	-3	intron_retention	FALSE	canonical	1	4707076	junction_1	1592903.0	NA	5	1	TRUE	NA	NA	NA	C	coding	121	366	96	461	10.0	-14	True	AATAAA	-14
PB.8010.4	chr3	+	2391	18	novel_in_catalog	MLH1	novel	2752	19	NA	NA	4	-4	no_combination_of_known_junctions	FALSE	canonical	1	19099	junction_16	102969.76948536163	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	29	2206	40.0	2	True	AATAAA	-12
PB.8010.5	chr3	+	2368	18	full-splice_match	MLH1	ENST00000539477.5	2366	18	0	-2	0	0	multi-exon	FALSE	canonical	1	7848	junction_5	133149.469568477	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	630	2177	30.0	-8	True	AATAAA	-18
PB.8010.6	chr3	+	1950	16	novel_in_catalog	MLH1	novel	2752	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	60503	junction_1	99835.48647641389	NA	2	NA	TRUE	NA	NA	NA	C	coding	392	1179	722	1900	5.0	-8	True	AATAAA	-13
PB.8010.7	chr3	+	2201	17	novel_in_catalog	MLH1	novel	2752	19	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	9469	junction_9	131146.95015891286	NA	7	NA	TRUE	NA	NA	NA	C	coding	398	1197	817	2013	30.0	0	True	AATAAA	-15
PB.8010.1	chr3	+	2444	18	novel_in_catalog	MLH1	novel	2752	19	NA	NA	-29	0	no_combination_of_known_junctions	FALSE	canonical	1	1297	junction_3	139453.38205990073	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	346	2253	30.0	-31	True	AATAAA	-18
PB.8010.2	chr3	+	2015	16	incomplete-splice_match	MLH1	ENST00000456676.6	2230	17	-86	3103	-29	1	3prime_fragment	FALSE	canonical	1	289469	junction_2	61731.74740353082	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	62	1963	15.0	-31	True	AATAAA	-15
PB.8010.3	chr3	+	2490	19	full-splice_match	MLH1	ENST00000231790.6	2752	19	188	74	4	0	multi-exon	FALSE	canonical	1	289469	junction_2	65176.60343299371	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	29	2299	30.0	2	True	AATAAA	-18
PB.3865.1	chr15	+	6523	21	full-splice_match	AP4E1	ENST00000261842.9	6758	21	229	6	107	0	multi-exon	FALSE	canonical	1	46867	junction_1	15207.965301446475	NA	0	NA	TRUE	NA	NA	NA	C	coding	1062	3189	103	3291	10.0	195	False	AATAAA	-16
PB.9769.9	chr6	-	2700	10	novel_in_catalog	DEK	novel	3427	11	NA	NA	-3	15	intron_retention	FALSE	canonical	1	5272	junction_5	673878.674068098	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	692	1183	65.0	278	False	TATAAA	-8
PB.9634.1	chr5	-	2404	4	novel_in_catalog	NOP16	novel	963	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	821916	junction_1	71546.50175623932	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	63	491	15.0	-4	True	AATAAA	-23
PB.3865.2	chr15	+	6864	22	novel_not_in_catalog	AP4E1	novel	1603	13	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	2697	junction_20	24967.90433859487	NA	0	NA	TRUE	NA	NA	NA	C	coding	1120	3363	101	3463	10.0	-28	True	AATAAA	-16
PB.3739.1	chr15	-	1676	1	full-splice_match	NSMCE3	ENST00000332303.5	4838	1	3	3159	3	-3159	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	304	915	122	1036	25.0	-18	True	AATAAA	-22
PB.3440.11	chr14	-	2309	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-30	-18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	93146.23721287225	NA	8	1	TRUE	NA	NA	NA	C	coding	184	555	219	773	80.0	-25	True	NA	NA
PB.3440.12	chr14	-	2291	7	novel_not_in_catalog	GNPNAT1	novel	3860	6	NA	NA	-6	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93146.23721287225	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	262	816	80.0	-68	True	NA	NA
PB.3440.13	chr14	-	1851	6	full-splice_match	GNPNAT1	ENST00000216410.7	3860	6	-44	2053	23	-690	multi-exon	FALSE	canonical	1	71305	junction_1	76740.04350637285	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	233	787	20.0	-39	True	ATTAAA	-29
PB.3440.14	chr14	-	1665	6	full-splice_match	GNPNAT1	ENST00000216410.7	3860	6	86	2109	-5	-746	multi-exon	FALSE	canonical	1	71305	junction_1	76740.04350637285	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	103	657	20.0	91	False	ATTAAA	-16
PB.9769.5	chr6	-	2792	11	novel_not_in_catalog	DEK	novel	3427	11	NA	NA	-7	35	intron_retention	FALSE	canonical	1	52017	junction_10	599715.5584845953	NA	3	NA	TRUE	NA	NA	NA	C	coding	375	1128	128	1255	20.0	-28	True	AATAAA	-15
PB.7268.6	chr20	-	3084	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	0	2255	0	-2255	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	12	39	377	415	35.0	-15	True	AGTAAA	-18
PB.11607.18	chr9	-	3077	6	incomplete-splice_match	CARNMT1	ENST00000376834.7	4130	8	99	13428	99	4162	3prime_fragment	FALSE	canonical	1	91040	junction_3	28059.425977022413	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	55	1101	80.0	-3	True	NA	NA
PB.1002.5	chr1	+	3637	16	novel_not_in_catalog	PLA2G4A	novel	2875	18	NA	NA	18267	920	any annotated donor/acceptor	FALSE	canonical	1	111	junction_1	43714.08885758559	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	268	2244	20.0	NA	False	AATAAA	-18
PB.1176.4	chr1	+	1969	4	novel_in_catalog	ARF1	novel	1972	5	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	99903	junction_1	3609453.8445153846	NA	4	1	TRUE	NA	NA	NA	C	coding	121	366	150	515	10.0	-5467	False	AATAAA	-14
PB.8313.4	chr3	-	3393	7	full-splice_match	IGSF11	ENST00000393775.6	3495	7	95	7	-1	0	multi-exon	FALSE	canonical	1	18789	junction_6	4114.11512019562	NA	2	NA	TRUE	NA	NA	NA	C	coding	431	1296	212	1507	45.0	-2	True	AATAAA	-14
PB.7268.7	chr20	-	2726	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	0	2613	0	-2613	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	12	39	377	415	45.0	-15	True	ATTAAA	-21
PB.7268.4	chr20	-	4880	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	1	458	1	-458	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	12	39	376	414	40.0	-14	True	AATGAA	-8
PB.2867.4	chr12	+	2002	3	full-splice_match	TMEM263	ENST00000548125.5	3349	3	188	1159	40	536	multi-exon	FALSE	canonical	1	115578	junction_1	180991.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	166	516	35.0	0	True	NA	NA
PB.2867.5	chr12	+	1785	3	full-splice_match	TMEM263	ENST00000548125.5	3349	3	187	1377	39	318	multi-exon	FALSE	canonical	1	115578	junction_1	180991.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	167	517	20.0	-1	True	GATAAA	-17
PB.2867.6	chr12	+	3285	5	full-splice_match	TMEM263	ENST00000550344.5	925	5	45	-2405	45	-3	multi-exon	FALSE	canonical	1	3484	junction_2	192831.235459112	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	345	695	40.0	5	True	AATAAA	-15
PB.2867.7	chr12	+	6292	3	full-splice_match	TMEM263	ENST00000548125.5	3349	3	97	-3040	-12	-1681	multi-exon	FALSE	canonical	1	115578	junction_1	180991.0	NA	11	NA	TRUE	NA	NA	NA	C	coding	116	351	257	607	85.0	-5447	False	NA	NA
PB.7071.5	chr2	+	2521	7	full-splice_match	COPS7B	ENST00000350033.7	2544	7	22	1	0	-1	multi-exon	FALSE	canonical	1	252632	junction_1	88696.93666528487	NA	2	NA	TRUE	NA	NA	NA	C	coding	264	795	120	914	35.0	-9	True	AATAAA	-21
PB.2867.1	chr12	+	3180	4	full-splice_match	TMEM263	ENST00000280756.8	3362	4	184	-2	39	2	multi-exon	FALSE	canonical	1	111727	junction_1	154260.14536562	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	235	585	40.0	-1	True	AATAAA	-20
PB.2867.2	chr12	+	3138	3	full-splice_match	TMEM263	ENST00000548125.5	3349	3	156	55	8	-3	multi-exon	FALSE	canonical	1	115578	junction_1	180991.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	198	548	40.0	-4	True	AATAAA	-15
PB.2867.3	chr12	+	3330	5	full-splice_match	TMEM263	ENST00000547242.5	811	5	77	-2596	38	1	multi-exon	FALSE	canonical	1	6741	junction_2	192209.6549116355	NA	3	NA	TRUE	NA	NA	NA	C	coding	116	351	334	684	20.0	-2	True	AATAAA	-19
PB.7268.2	chr20	-	4296	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	1040	3	1040	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	1025	False	AATAAA	-18
PB.7517.24	chr21	+	6952	37	novel_in_catalog	TTC3	novel	769	9	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	103352.34193131523	NA	2	NA	TRUE	NA	NA	NA	C	coding	1715	5148	282	5429	40.0	4	True	AATAAA	-10
PB.7517.25	chr21	+	1674	17	novel_in_catalog	TTC3	novel	769	9	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	1	16053	junction_15	97163.14764673433	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1395	279	1673	80.0	7	True	NA	NA
PB.2867.8	chr12	+	3335	5	novel_not_in_catalog	TMEM263	novel	3349	3	NA	NA	3	24	any annotated donor/acceptor	FALSE	canonical	1	476	junction_4	88261.87215716366	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	359	718	60.0	-5432	False	AATAAA	-42
PB.2867.9	chr12	+	2031	5	full-splice_match	TMEM263	ENST00000550344.5	925	5	-26	-1080	-3	315	multi-exon	FALSE	canonical	1	3484	junction_2	192831.235459112	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	416	766	25.0	-5422	False	GATAAA	-14
PB.7517.20	chr21	+	3745	33	full-splice_match	TTC3	ENST00000418766.5	3771	33	23	3	3	-3	multi-exon	FALSE	canonical	1	11239	junction_7	91302.55371666006	NA	1	NA	TRUE	NA	NA	NA	C	coding	1178	3534	212	3745	75.0	0	True	NA	NA
PB.7268.3	chr20	-	3291	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	2043	5	2043	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	2028	False	AATAAA	-16
PB.6836.4	chr2	+	3131	10	novel_not_in_catalog	METAP1D	novel	3419	10	NA	NA	-2	-4	any annotated donor/acceptor	TRUE	canonical	1	3399	junction_3	28697.560092871146	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	458	1111	25.0	-2	True	ATTAAA	-11
PB.6836.5	chr2	+	3166	9	incomplete-splice_match	METAP1D	ENST00000315796.4	3419	10	370	4	-2	-4	intron_retention	FALSE	canonical	1	32260	junction_3	22631.822134096383	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	18	1046	25.0	-2	True	ATTAAA	-11
PB.6836.2	chr2	+	3057	10	full-splice_match	METAP1D	ENST00000315796.4	3419	10	361	1	1	-1	multi-exon	FALSE	canonical	1	32260	junction_3	22523.39298990669	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	27	1034	25.0	-11	True	ATTAAA	-14
PB.6836.3	chr2	+	2633	3	full-splice_match	METAP1D	ENST00000493035.5	929	3	9	-1713	-3	1713	multi-exon	FALSE	canonical	1	42414	junction_1	19768.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	127	384	19	402	10.0	-3	True	AATAAA	-39
PB.6836.1	chr2	+	2907	9	novel_in_catalog	METAP1D	novel	3419	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2439	junction_3	30636.024476657785	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	28	411	30.0	-12	True	ATTAAA	-12
PB.7268.1	chr20	-	5256	1	full-splice_match	NORAD	ENST00000565493.1	5339	1	-1	84	-1	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	12	39	378	416	5.0	-16	True	TATAAA	-20
PB.6429.6	chr2	-	4826	24	full-splice_match	DHX57	ENST00000457308.5	4859	24	-24	57	2	-50	multi-exon	FALSE	canonical	1	64480	junction_23	54914.92021688842	NA	1	NA	TRUE	NA	NA	NA	C	coding	1386	4161	153	4313	25.0	-15	True	ATTAAA	-29
PB.6710.5	chr2	+	3561	6	full-splice_match	INSIG2	ENST00000245787.8	2590	6	-3	-968	-3	-1	multi-exon	FALSE	canonical	1	60805	junction_1	124467.96279107327	NA	2	NA	TRUE	NA	NA	NA	C	coding	225	678	210	887	20.0	0	True	AATAAA	-16
PB.2290.1	chr11	+	1073	7	full-splice_match	REXO2	ENST00000611665.4	1158	7	85	0	0	0	multi-exon	TRUE	canonical	1	1180630	junction_5	167178.5874500845	NA	0	NA	TRUE	NA	NA	NA	A	coding	205	618	155	772	30.0	0	True	NA	NA
PB.2290.2	chr11	+	2680	1	novel_in_catalog	AP002373.1	novel	729	7	NA	NA	38798	-1773	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	113	342	50	391	80.0	9	True	GATAAA	-7
PB.2290.3	chr11	+	2988	5	novel_in_catalog	AP002373.1	novel	729	7	NA	NA	38807	6344	intron_retention	FALSE	canonical	1	1180630	junction_3	138690.19477778522	NA	3	NA	TRUE	NA	NA	NA	B	coding	138	417	41	457	30.0	18	True	NA	NA
PB.8894.4	chr4	-	1037	7	full-splice_match	LAMTOR3	ENST00000499666.6	4226	7	34	3155	-28	2	multi-exon	FALSE	canonical	1	187053	junction_5	94835.65781817278	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	160	534	25.0	24	False	AATAAA	-15
PB.1002.3	chr1	+	2865	18	full-splice_match	PLA2G4A	ENST00000367466.3	2875	18	2	8	2	-8	multi-exon	FALSE	canonical	1	35465	junction_3	35348.41797480899	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	151	2400	60.0	-35	True	NA	NA
PB.10510.9	chr7	-	3105	6	novel_in_catalog	COA1	novel	1737	7	NA	NA	-4	0	intron_retention	FALSE	canonical	1	111031	junction_4	404616.55406144715	NA	11	2	TRUE	NA	NA	NA	C	coding	106	321	1427	1747	10.0	-11	True	AATAAA	-17
PB.10510.3	chr7	-	2958	7	novel_in_catalog	COA1	novel	1737	7	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	35486	junction_1	352184.360507115	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	134	574	50.0	-41	True	NA	NA
PB.10510.2	chr7	-	1871	7	full-splice_match	COA1	ENST00000446330.6	1520	7	6	-357	-2	-6	multi-exon	FALSE	canonical	1	22572	junction_1	356148.02589501557	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	118	558	35.0	-25	True	AATAAA	-9
PB.10510.1	chr7	-	4278	8	novel_not_in_catalog	COA1	novel	1737	7	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	10323	junction_1	402008.92078263185	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	121	561	20.0	-28	True	AATAAA	-16
PB.10510.7	chr7	-	1304	8	novel_not_in_catalog	COA1	novel	1737	7	NA	NA	0	3	any annotated donor/acceptor	FALSE	canonical	1	1239	junction_6	443587.856841074	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	539	976	10.0	-28	True	AATAAA	-20
PB.12186.1	chrX	-	1354	7	full-splice_match	GLA	ENST00000218516.3	1318	7	-35	-1	-35	1	multi-exon	FALSE	canonical	1	466827	junction_4	73991.6957187314	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	58	1347	30.0	-3	True	ATTAAA	-21
PB.12186.2	chrX	-	1352	3	full-splice_match	GLA	ENST00000479445.1	793	3	-44	-515	-6	515	multi-exon	FALSE	canonical	1	474836	junction_1	19332.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	29	664	80.0	-7	True	NA	NA
PB.7177.10	chr20	-	2860	3	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-35	-43534	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	36275.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	230	693	86	778	100.0	-16	True	AAGAAA	-31
PB.1319.1	chr10	-	2556	1	full-splice_match	STAM-AS1	ENST00000563601.1	2595	1	-26	65	-26	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-25
PB.6710.4	chr2	+	2560	6	novel_not_in_catalog	INSIG2	novel	574	5	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	3961	junction_2	163332.93369434102	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	503	856	15.0	-1	True	ATTAAA	-19
PB.9944.7	chr6	+	3205	13	novel_in_catalog	ZNF76	novel	1476	5	NA	NA	-39	0	intron_retention	TRUE	canonical	1	17804	junction_9	88087.23014476268	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	204	1430	10.0	0	True	AATAAA	-14
PB.2847.21	chr12	+	2688	18	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	1126	junction_3	1584274.0699341982	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	107	2422	10.0	0	True	AATAAA	-17
PB.2847.20	chr12	+	1902	13	incomplete-splice_match	HSP90B1	ENST00000299767.9	2858	18	75	4702	-1	-243	3prime_fragment	FALSE	canonical	1	1962474	junction_4	830876.8131039969	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1794	108	1901	55.0	-1	True	NA	NA
PB.2847.23	chr12	+	4254	15	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	1	-5	intron_retention	FALSE	canonical	1	1962474	junction_2	1384969.142617301	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	1625	3151	30.0	1	True	AATAAA	-10
PB.2847.22	chr12	+	2700	18	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1574417.037328642	NA	1	1	TRUE	NA	NA	NA	C	coding	761	2286	174	2459	70.0	0	True	NA	NA
PB.2847.25	chr12	+	2202	16	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	3	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	1687945.3919139078	NA	35	3	TRUE	NA	NA	NA	C	coding	434	1305	639	1943	30.0	3	True	AATAAA	-10
PB.2847.24	chr12	+	2832	18	novel_not_in_catalog	HSP90B1	novel	581	4	NA	NA	3	-5	any annotated donor/acceptor	FALSE	canonical	1	11302	junction_1	1597043.9821627266	NA	2	NA	TRUE	NA	NA	NA	C	coding	719	2160	414	2573	30.0	3	True	AATAAA	-10
PB.2847.26	chr12	+	3145	17	novel_in_catalog	HSP90B1	novel	581	4	NA	NA	22	-5	intron_retention	FALSE	canonical	1	1962474	junction_4	1350509.0640100252	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	57	2042	30.0	-7285	False	AATAAA	-10
PB.10826.1	chr7	+	1308	2	full-splice_match	HILPDA	ENST00000257696.4	1349	2	40	1	28	0	multi-exon	FALSE	canonical	1	328479	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	A	coding	63	192	162	353	15.0	-16	False	AATAAA	-16
PB.5821.4	chr19	+	3587	11	novel_in_catalog	SLC27A1	novel	1423	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	59617	junction_1	32810.03203122484	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	12	1508	10.0	0	True	AATAAA	-14
PB.5821.3	chr19	+	3376	11	novel_in_catalog	SLC27A1	novel	1423	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	3899	junction_10	51148.76518353107	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	27	1820	10.0	-15	True	AATAAA	-14
PB.5821.2	chr19	+	3523	12	full-splice_match	SLC27A1	ENST00000252595.11	3594	12	71	0	-13	0	multi-exon	FALSE	canonical	1	59617	junction_1	33293.51325845485	NA	2	NA	TRUE	NA	NA	NA	C	coding	646	1941	27	1967	10.0	-15	True	AATAAA	-14
PB.5821.1	chr19	+	3774	13	novel_in_catalog	SLC27A1	novel	1423	6	NA	NA	-29	5	combination_of_known_junctions	TRUE	canonical	1	11374	junction_1	46003.92961680013	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	273	2213	15.0	-1790	False	AATAAA	-19
PB.1627.3	chr10	+	4126	4	full-splice_match	WBP1L	ENST00000448841.6	1428	4	50	-2748	-31	-5	multi-exon	FALSE	canonical	1	169855	junction_1	46757.07828292478	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	104	1195	5.0	3	True	AATAAA	-16
PB.1627.2	chr10	+	4052	5	novel_not_in_catalog	WBP1L	novel	1428	4	NA	NA	-33	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	102600.76531482355	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	677	1126	30.0	1	True	AATAAA	-11
PB.1627.1	chr10	+	3977	4	novel_not_in_catalog	WBP1L	novel	1428	4	NA	NA	17	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	118392.14758870905	NA	1	NA	TRUE	NA	NA	NA	C	coding	149	450	601	1050	25.0	-68	False	AATAAA	-12
PB.8130.8	chr3	+	3001	16	novel_not_in_catalog	SEMA3B	novel	934	7	NA	NA	-8	0	intron_retention	FALSE	canonical	1	11417	junction_12	90255.51361541422	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	85	1518	30.0	-14	True	AATAAA	-14
PB.1627.5	chr10	+	4215	4	full-splice_match	WBP1L	ENST00000369889.5	4107	4	-118	10	-118	-10	multi-exon	FALSE	canonical	1	19893	junction_1	109399.32497354207	NA	3	NA	TRUE	NA	NA	NA	C	coding	342	1029	261	1289	30.0	-10005	False	AATAAA	-11
PB.1627.4	chr10	+	2688	4	full-splice_match	WBP1L	ENST00000448841.6	1428	4	87	-1347	6	1347	multi-exon	FALSE	canonical	1	169855	junction_1	46757.07828292478	NA	21	NA	TRUE	NA	NA	NA	C	coding	363	1092	67	1158	75.0	2	True	NA	NA
PB.11466.20	chr9	-	2926	4	novel_not_in_catalog	PSIP1	novel	3364	16	NA	NA	-10	-2662	any annotated donor/acceptor	FALSE	canonical	1	2031	junction_1	127231.00569786002	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-27
PB.1877.1	chr11	-	2152	6	novel_not_in_catalog	CCDC73	novel	3849	18	NA	NA	-35686	-110669	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1593.9210269018977	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-14
PB.6689.5	chr2	+	5065	4	novel_in_catalog	BCL2L11	novel	572	2	NA	NA	-9	0	intron_retention	FALSE	canonical	1	13585	junction_1	45114.51208498953	NA	4	NA	TRUE	NA	NA	NA	C	coding	198	597	253	849	10.0	-6	True	AATAAA	-17
PB.2419.6	chr12	-	3488	22	incomplete-splice_match	CHD4	ENST00000645005.1	6175	40	14907	-339	76	-1	5prime_fragment	TRUE	canonical	1	105517	junction_7	400118.2872083733	NA	5	NA	TRUE	NA	NA	NA	C	coding	961	2886	10	2895	10.0	9586	False	AATAAA	-17
PB.2419.5	chr12	-	6562	40	full-splice_match	CHD4	ENST00000544040.6	6582	40	25	-5	1	-1	multi-exon	FALSE	canonical	1	410925	junction_37	370644.6827130066	NA	0	NA	TRUE	NA	NA	NA	C	coding	1912	5739	231	5969	10.0	6128	False	AATAAA	-17
PB.2419.2	chr12	-	6449	40	full-splice_match	CHD4	ENST00000645022.1	6673	40	135	89	5	0	multi-exon	FALSE	canonical	1	448723	junction_37	368657.8413286614	NA	0	NA	TRUE	NA	NA	NA	C	coding	1905	5718	227	5944	90.0	6132	False	AATAAA	-5
PB.10801.1	chr7	+	2350	10	full-splice_match	CAPZA2	ENST00000361183.7	5182	10	128	2704	1	1157	multi-exon	FALSE	canonical	1	322393	junction_8	409933.3686886742	NA	1	NA	TRUE	NA	NA	NA	C	coding	286	861	12	872	25.0	14	True	AAGAAA	-17
PB.10801.3	chr7	+	1929	10	full-splice_match	CAPZA2	ENST00000361183.7	5182	10	46	3207	-11	654	multi-exon	FALSE	canonical	1	322393	junction_8	409933.3686886742	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	94	954	25.0	-19	True	NA	NA
PB.10801.4	chr7	+	1668	10	full-splice_match	CAPZA2	ENST00000361183.7	5182	10	115	3399	1	462	multi-exon	FALSE	canonical	1	322393	junction_8	409933.3686886742	NA	2	1	TRUE	NA	NA	NA	C	coding	286	861	25	885	15.0	1	True	AATATA	-18
PB.5326.2	chr17	+	4585	5	full-splice_match	MRPL12	ENST00000333676.7	1028	5	29	-3586	29	3586	multi-exon	FALSE	canonical	1	1066835	junction_1	466448.5442743792	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	225	713	30.0	19	True	NA	NA
PB.5326.1	chr17	+	1012	5	full-splice_match	MRPL12	ENST00000333676.7	1028	5	10	6	10	-6	multi-exon	FALSE	canonical	1	1066835	junction_1	466448.5442743792	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	244	732	10.0	0	True	AATACA	-16
PB.10801.7	chr7	+	2291	11	novel_in_catalog	CAPZA2	novel	324	5	NA	NA	21	967	combination_of_known_junctions	FALSE	canonical	1	9944	junction_2	477029.0843038818	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	176	1003	45.0	-36	False	AATAAA	-17
PB.10801.8	chr7	+	2247	9	novel_in_catalog	CAPZA2	novel	324	5	NA	NA	27	1070	combination_of_known_junctions	FALSE	canonical	1	4561	junction_5	519183.3693492689	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	56	856	30.0	-30	True	AATATA	-14
PB.10801.9	chr7	+	2104	9	novel_in_catalog	CAPZA2	novel	324	5	NA	NA	-3	966	no_combination_of_known_junctions	FALSE	canonical	1	4351	junction_7	456796.1465093045	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	29	817	40.0	-3	True	AATAAA	-16
PB.7349.1	chr20	-	3244	3	full-splice_match	SPATA2	ENST00000289431.9	4022	3	12	766	12	-763	multi-exon	FALSE	canonical	1	65997	junction_2	24116.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	220	1782	40.0	-6	True	AATAAA	-18
PB.7349.2	chr20	-	2816	3	full-splice_match	SPATA2	ENST00000289431.9	4022	3	-232	1438	-232	-1435	multi-exon	FALSE	canonical	1	65997	junction_2	24116.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	464	2026	15.0	-5	True	AATAAA	-13
PB.7349.3	chr20	-	1949	1	incomplete-splice_match	SPATA2	ENST00000289431.9	4022	3	8741	1428	6972	-1425	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	360	1083	67	1149	55.0	8968	False	AATAAA	-23
PB.8346.6	chr3	-	3197	11	full-splice_match	PARP9	ENST00000477522.6	3128	11	-71	2	-71	-2	multi-exon	FALSE	canonical	1	14307	junction_10	138561.99476494268	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	300	2759	40.0	-12	True	AATAAA	-17
PB.8028.1	chr3	-	6042	3	full-splice_match	XIRP1	ENST00000396251.1	6040	3	1	-3	0	3	multi-exon	FALSE	canonical	1	36856	junction_2	21615.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	1121	3366	231	3596	20.0	-3	True	NA	NA
PB.3327.1	chr14	+	3499	4	full-splice_match	BCL2L2	ENST00000250405.9	3605	4	97	9	-1	-9	multi-exon	FALSE	canonical	1	182978	junction_3	38672.500057103454	NA	0	NA	TRUE	NA	NA	NA	A	coding	193	582	133	714	25.0	26	True	AATAAA	-24
PB.2504.1	chr12	-	4137	5	full-splice_match	ST8SIA1	ENST00000396037.8	9714	5	-205	5782	-205	1826	multi-exon	FALSE	canonical	1	22538	junction_3	6049.881873846794	NA	2	NA	TRUE	NA	NA	NA	C	coding	341	1026	733	1758	90.0	0	True	NA	NA
PB.2504.2	chr12	-	2106	5	full-splice_match	ST8SIA1	ENST00000396037.8	9714	5	-5	7613	-5	-5	multi-exon	FALSE	canonical	1	22538	junction_3	6049.881873846794	NA	1	NA	TRUE	NA	NA	NA	C	coding	341	1026	533	1558	25.0	200	False	AATAAA	-20
PB.541.5	chr1	+	3099	9	novel_not_in_catalog	MTF2	novel	3845	13	NA	NA	-3	2334	intron_retention	FALSE	canonical	1	176	junction_8	113957.11062363551	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	248	1045	60.0	-3	True	AATACA	-38
PB.8313.1	chr3	-	4867	7	full-splice_match	IGSF11	ENST00000393775.6	3495	7	54	-1426	-42	1356	multi-exon	FALSE	canonical	1	18789	junction_6	4114.11512019562	NA	1	NA	TRUE	NA	NA	NA	C	coding	431	1296	253	1548	30.0	11	True	NA	NA
PB.4422.2	chr16	-	2825	4	full-splice_match	SNX20	ENST00000330943.8	2904	4	36	43	-4	-43	multi-exon	FALSE	canonical	1	73733	junction_1	27896.955214184614	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	137	1087	55.0	4007	False	NA	NA
PB.4422.1	chr16	-	3013	4	novel_not_in_catalog	SNX20	novel	2156	4	NA	NA	-379	-43	intron_retention	FALSE	canonical	1	409	junction_3	57749.23448458478	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	325	1275	55.0	-1	True	NA	NA
PB.9979.10	chr6	+	3533	8	novel_in_catalog	NFYA	novel	3811	10	NA	NA	2	-15	no_combination_of_known_junctions	FALSE	canonical	1	3263	junction_1	95929.20560177571	NA	1	NA	TRUE	NA	NA	NA	C	coding	287	864	119	982	65.0	-909	False	AATAAA	-6
PB.8822.1	chr4	+	4611	5	full-splice_match	EREG	ENST00000244869.2	4619	5	2	6	2	-6	multi-exon	FALSE	canonical	1	151680	junction_4	6133.50961929628	NA	0	NA	TRUE	NA	NA	NA	A	coding	163	492	183	674	40.0	0	True	AATAAA	-28
PB.11944.3	chrY	+	3171	5	full-splice_match	AKAP17A	ENST00000313871.8_PAR_Y	3204	5	34	-1	2	1	multi-exon	FALSE	canonical	1	52	junction_1	498.48840257321933	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	163	2250	30.0	NA	False	AATAAA	-18
PB.11944.2	chrY	+	3241	6	full-splice_match	AKAP17A	ENST00000474361.6_PAR_Y	3232	6	4	-13	2	1	multi-exon	FALSE	canonical	1	52	junction_1	487.01047216666706	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	163	1320	30.0	NA	False	AATAAA	-18
PB.11944.1	chrY	+	4404	4	full-splice_match	AKAP17A	ENST00000381261.8_PAR_Y	2187	4	2	-2219	2	8	multi-exon	FALSE	canonical	1	52	junction_1	516.9405725569967	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	163	1503	15.0	NA	False	AATAAA	-25
PB.441.1	chr1	-	1917	9	full-splice_match	CYP2J2	ENST00000371204.3	1896	9	-18	-3	-18	3	multi-exon	FALSE	canonical	1	48661	junction_8	14216.520970335885	NA	0	NA	TRUE	NA	NA	NA	A	coding	498	1497	75	1571	0.0	-23	True	CATAAA	-17
PB.11944.4	chrY	+	3949	5	novel_in_catalog	AKAP17A	novel	3204	5	NA	NA	10	12	intron_retention	FALSE	canonical	1	52	junction_1	510.8656256786123	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	155	1495	15.0	NA	False	AATAAA	-29
PB.832.1	chr1	+	3575	7	novel_not_in_catalog	PRCC	novel	833	4	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	4137	junction_5	334165.36437190126	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	267	1634	20.0	-29	False	AATAAA	-15
PB.5835.1	chr19	+	1348	5	full-splice_match	MPV17L2	ENST00000599612.2	1408	5	36	24	0	-24	multi-exon	FALSE	canonical	1	194140	junction_1	86903.44244727881	NA	1	NA	TRUE	NA	NA	NA	A	coding	206	621	65	685	80.0	0	True	NA	NA
PB.10383.13	chr7	-	2357	4	novel_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	16600346	junction_2	10646099.430872552	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	892	1530	45.0	-1	True	AATAAA	-13
PB.7340.3	chr20	+	6128	39	novel_not_in_catalog	ARFGEF2	novel	8852	39	NA	NA	-181	-2902	any annotated donor/acceptor	FALSE	canonical	1	54443	junction_7	57462.11705114945	NA	0	NA	TRUE	NA	NA	NA	C	coding	1784	5355	182	5536	55.0	-19	True	TTTAAA	-10
PB.10383.14	chr7	-	1802	6	full-splice_match	ACTB	ENST00000646664.1	1812	6	0	10	0	-2	multi-exon	FALSE	canonical	1	16600346	junction_4	13046890.85976975	NA	34	NA	TRUE	NA	NA	NA	C	coding	375	1128	85	1212	40.0	-1	True	AATAAA	-11
PB.10383.17	chr7	-	1899	5	novel_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	16600346	junction_3	13845633.10076735	NA	1	NA	TRUE	NA	NA	NA	C	coding	277	834	85	918	45.0	-1	True	AATAAA	-13
PB.10383.16	chr7	-	1916	5	novel_in_catalog	ACTB	novel	1921	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	16600346	junction_3	9647955.296977784	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	85	1089	45.0	-1	True	AATAAA	-13
PB.10383.19	chr7	-	1732	7	novel_not_in_catalog	ACTB	novel	1921	6	NA	NA	-1	0	intron_retention	TRUE	canonical	0	0	junction_1	17399738.864621338	NA	2	1	TRUE	NA	NA	NA	C	coding	375	1128	82	1209	45.0	2	True	AATAAA	-13
PB.3950.1	chr15	+	1413	2	full-splice_match	SPESP1	ENST00000310673.3	1431	2	17	1	17	-1	multi-exon	FALSE	canonical	1	23033	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	138	1190	15.0	-8	True	AATAAA	-14
PB.3950.2	chr15	+	2270	2	full-splice_match	SPESP1	ENST00000310673.3	1431	2	25	-864	25	864	multi-exon	FALSE	canonical	1	23033	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	350	1053	130	1182	35.0	0	True	AATACA	-19
PB.3950.3	chr15	+	2882	17	full-splice_match	NOX5	ENST00000448182.7	2498	17	3	-387	3	-2	multi-exon	FALSE	canonical	1	769	junction_2	5896.104640658419	NA	0	NA	TRUE	NA	NA	NA	A	coding	719	2160	299	2458	60.0	3	True	NA	NA
PB.10413.2	chr7	+	1509	12	full-splice_match	BZW2	ENST00000258761.7	1860	12	17	334	-12	-8	multi-exon	FALSE	canonical	1	454824	junction_1	199759.39985930268	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	149	1408	65.0	-33	True	NA	NA
PB.10785.1	chr7	-	3247	3	full-splice_match	THAP5	ENST00000415914.3	3306	3	57	2	3	-2	multi-exon	FALSE	canonical	1	22146	junction_1	3887.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	395	1188	98	1285	40.0	39	True	AATAAA	-21
PB.12342.6	chrX	-	3520	15	novel_not_in_catalog	IRAK1	novel	3666	14	NA	NA	5	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	433965.7499973709	NA	3	NA	TRUE	NA	NA	NA	B	coding	686	2061	111	2171	15.0	4	True	AATAAA	-12
PB.12342.7	chrX	-	2152	5	incomplete-splice_match	IRAK1	ENST00000393687.6	2049	14	3725	-1349	-14	-4	5prime_fragment	FALSE	canonical	1	86850	junction_3	477648.21776831744	NA	1	NA	TRUE	NA	NA	NA	B	coding	212	639	165	803	15.0	4985	False	AATAAA	-12
PB.1895.1	chr11	+	2507	1	full-splice_match	FJX1	ENST00000317811.5	2450	1	-62	5	-62	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	437	1314	281	1594	25.0	-32	True	AATAAA	-16
PB.209.1	chr1	+	1595	6	full-splice_match	TMEM222	ENST00000374076.8	1599	6	3	1	3	0	multi-exon	FALSE	canonical	1	354798	junction_2	97039.25273537508	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	36	662	10.0	-12	True	AATAAA	-14
PB.3763.2	chr15	-	3471	12	incomplete-splice_match	MEIS2	ENST00000338564.9	4829	13	822	1828	147	0	5prime_fragment	FALSE	canonical	1	70822	junction_1	52784.44150904211	NA	5	NA	TRUE	NA	NA	NA	C	coding	406	1221	1110	2330	10.0	-1	True	AATAAA	-14
PB.209.3	chr1	+	2833	6	incomplete-splice_match	TMEM222	ENST00000464720.5	1665	7	-72	1	15	0	intron_retention	FALSE	canonical	1	50936	junction_2	216433.7066876599	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	24	341	10.0	0	True	AATAAA	-14
PB.209.2	chr1	+	2683	5	full-splice_match	TMEM222	ENST00000464813.5	1071	5	-109	-1503	12	0	multi-exon	FALSE	canonical	1	354798	junction_2	98463.37911471198	NA	2	NA	TRUE	NA	NA	NA	C	coding	160	483	87	569	10.0	-3	True	AATAAA	-14
PB.4004.3	chr15	+	3148	5	incomplete-splice_match	RCN2	ENST00000394885.7	6347	7	118	4490	-1	42	intron_retention	FALSE	canonical	1	667341	junction_1	214394.27382803394	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	106	786	10.0	-12	True	ATTAAA	-17
PB.5318.1	chr17	-	1995	2	full-splice_match	AC110285.2	ENST00000571724.3	1565	2	-431	1	-431	-1	multi-exon	FALSE	canonical	1	51050	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	150	453	974	1426	10.0	7882	False	ATTAAA	-19
PB.4004.1	chr15	+	1720	7	full-splice_match	RCN2	ENST00000394885.7	6347	7	137	4490	1	42	multi-exon	FALSE	canonical	1	667341	junction_1	304622.783956787	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	87	1040	10.0	7	True	ATTAAA	-17
PB.9154.1	chr5	-	1704	6	full-splice_match	ZNF622	ENST00000308683.2	1699	6	-6	1	-6	-1	multi-exon	FALSE	canonical	1	407185	junction_2	41980.96636048294	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	185	1567	20.0	1	True	AATAAA	-13
PB.4004.7	chr15	+	1990	7	novel_not_in_catalog	RCN2	novel	6347	7	NA	NA	6	44	any annotated donor/acceptor	FALSE	canonical	1	7990	junction_6	497849.10597143346	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	82	921	5.0	12	True	ATTAAA	-19
PB.4004.6	chr15	+	2238	6	incomplete-splice_match	RCN2	ENST00000394885.7	6347	7	137	4489	1	43	intron_retention	FALSE	canonical	1	667341	junction_1	310329.6759402813	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	87	947	10.0	7	True	ATTAAA	-18
PB.4004.5	chr15	+	1759	7	novel_not_in_catalog	RCN2	novel	6347	7	NA	NA	0	42	any annotated donor/acceptor	FALSE	canonical	1	2305	junction_1	512519.062684637	NA	1	NA	TRUE	NA	NA	NA	C	coding	281	846	234	1079	10.0	6	True	ATTAAA	-17
PB.4004.4	chr15	+	1780	8	full-splice_match	RCN2	ENST00000320963.9	1750	8	12	-42	-5	42	multi-exon	FALSE	canonical	1	15599	junction_3	592487.0711109506	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	93	1100	10.0	1	True	ATTAAA	-17
PB.8313.3	chr3	-	3592	8	novel_in_catalog	IGSF11	novel	3525	8	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	1	2155	junction_7	11941.490285759895	NA	4	NA	TRUE	NA	NA	NA	C	coding	372	1119	589	1707	45.0	44	False	AATAAA	-13
PB.4739.1	chr17	+	6324	29	full-splice_match	POLR2A	ENST00000617998.4	6751	29	423	4	169	-4	multi-exon	FALSE	canonical	1	363337	junction_1	188756.1339764883	NA	1	NA	TRUE	NA	NA	NA	C	coding	1947	5844	76	5919	40.0	-6	True	AATAAA	-18
PB.4739.2	chr17	+	6579	30	novel_not_in_catalog	POLR2A	novel	6751	29	NA	NA	0	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_29	238737.00410605865	NA	5	NA	TRUE	NA	NA	NA	C	coding	1924	5775	400	6174	40.0	0	True	AATAAA	-18
PB.7340.5	chr20	+	8872	37	novel_not_in_catalog	ARFGEF2	novel	8852	39	NA	NA	-179	-8	any annotated donor/acceptor	FALSE	canonical	1	240	junction_1	59569.81521018135	NA	2	NA	TRUE	NA	NA	NA	C	coding	1597	4794	593	5386	40.0	-17	True	AATAAA	-6
PB.1881.1	chr11	-	2819	21	full-splice_match	CSTF3	ENST00000323959.8	2797	21	-27	5	-1	-5	multi-exon	FALSE	canonical	1	159628	junction_11	151666.91040114022	NA	13	1	TRUE	NA	NA	NA	C	coding	717	2154	168	2321	25.0	-13	True	AATAAA	-10
PB.8814.1	chr4	+	2386	7	full-splice_match	DCK	ENST00000286648.9	2716	7	326	4	127	-4	multi-exon	FALSE	canonical	1	293800	junction_1	81821.03802133586	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	72	854	25.0	0	True	AATAAA	-27
PB.1881.3	chr11	-	2732	21	novel_not_in_catalog	CSTF3	novel	592	4	NA	NA	1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	163633.2968267461	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	169	2151	5.0	-14	True	AATAAA	-17
PB.1881.2	chr11	-	4357	20	novel_in_catalog	CSTF3	novel	592	4	NA	NA	11	2	intron_retention	FALSE	canonical	1	159628	junction_10	153718.9536054935	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	156	1604	5.0	-1	True	AATAAA	-17
PB.1881.5	chr11	-	2723	20	novel_in_catalog	CSTF3	novel	592	4	NA	NA	-1	-5	no_combination_of_known_junctions	FALSE	canonical	1	533	junction_18	124939.38865151757	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	168	2225	25.0	-13	True	AATAAA	-10
PB.1881.4	chr11	-	2932	22	full-splice_match	CSTF3	ENST00000524827.6	2911	22	-9	-12	-8	1	multi-exon	FALSE	canonical	1	12695	junction_21	141145.8108959452	NA	0	NA	TRUE	NA	NA	NA	C	coding	749	2250	179	2428	5.0	15	True	AATAAA	-16
PB.1881.7	chr11	-	2559	6	novel_in_catalog	CSTF3	novel	2797	21	NA	NA	6	-21076	intron_retention	FALSE	canonical	1	202353	junction_2	249244.80491227895	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	161	520	60.0	-6	True	NA	NA
PB.8814.7	chr4	+	2283	7	full-splice_match	DCK	ENST00000286648.9	2716	7	167	266	-32	-266	multi-exon	FALSE	canonical	1	293800	junction_1	81821.03802133586	NA	1	NA	TRUE	NA	NA	NA	C	coding	260	783	231	1013	35.0	-43	True	ATTAAA	-23
PB.1881.9	chr11	-	2711	3	full-splice_match	CSTF3	ENST00000438862.6	1132	3	40	-1619	0	1619	multi-exon	FALSE	canonical	1	682890	junction_2	37847.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	167	478	20.0	-12	True	AATAAA	-15
PB.1881.8	chr11	-	2826	2	full-splice_match	CSTF3	ENST00000431742.2	715	2	7	-2118	7	1619	multi-exon	FALSE	canonical	1	682890	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-5	True	AATAAA	-15
PB.10014.10	chr6	+	2784	11	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	13	0	intron_retention	FALSE	canonical	1	164979	junction_1	269333.18883384945	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	122	652	5.0	-23	True	AATAAA	-18
PB.10014.11	chr6	+	2214	13	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	5791	junction_1	292079.8848620014	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	232	1602	5.0	-5	True	AATAAA	-16
PB.10014.12	chr6	+	2281	14	novel_not_in_catalog	SLC29A1	novel	2318	13	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	3080	junction_1	341179.75429981604	NA	3	NA	TRUE	NA	NA	NA	C	coding	456	1371	294	1664	10.0	13	True	AATAAA	-21
PB.815.1	chr1	-	3535	11	full-splice_match	UBQLN4	ENST00000368309.3	3576	11	41	0	41	0	multi-exon	FALSE	canonical	1	117	junction_6	22194.464391825273	NA	1	NA	TRUE	NA	NA	NA	A	coding	601	1806	53	1858	5.0	43	False	AATAAA	-21
PB.7340.4	chr20	+	2803	1	genic	ARFGEF2	novel	NA	NA	NA	NA	-181	-73935	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-19	True	NA	NA
PB.3667.17	chr14	+	1341	10	full-splice_match	PPP2R5C	ENST00000557095.5	1307	10	-35	1	1	-1	multi-exon	FALSE	canonical	1	460	junction_5	226122.86963021333	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	104	1228	20.0	4	True	AATAAA	-40
PB.8833.1	chr4	-	2206	12	full-splice_match	NUP54	ENST00000264883.7	2367	12	159	2	21	-2	multi-exon	FALSE	canonical	1	261041	junction_9	95185.36634404253	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	523	1506	20.0	77	False	AATAAA	-22
PB.7049.2	chr2	+	1757	8	full-splice_match	MFF	ENST00000349901.11	1716	8	-26	-15	0	-4	multi-exon	FALSE	canonical	1	79717	junction_5	189530.12934321852	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	331	1047	30.0	-18	True	AATAAA	-10
PB.5524.9	chr18	+	2927	11	novel_in_catalog	CNDP2	novel	547	5	NA	NA	3	0	intron_retention	FALSE	canonical	1	377991	junction_1	256476.79183857943	NA	1	NA	TRUE	NA	NA	NA	C	coding	430	1293	139	1431	40.0	9	True	AATAAA	-20
PB.5524.8	chr18	+	3412	13	novel_not_in_catalog	CNDP2	novel	547	5	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	3369	junction_2	404879.15530713875	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	932	2359	40.0	3	True	AATAAA	-20
PB.8833.5	chr4	-	2180	11	novel_in_catalog	NUP54	novel	1671	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	20853	junction_3	155817.25577817112	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	61	1476	15.0	-1	True	AATAAA	-26
PB.8833.4	chr4	-	2416	13	novel_in_catalog	NUP54	novel	1671	4	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	1	1391	junction_12	180951.1007516756	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	729	1712	15.0	8	True	AATAAA	-26
PB.8833.7	chr4	-	2082	12	full-splice_match	NUP54	ENST00000264883.7	2367	12	81	204	0	-204	multi-exon	FALSE	canonical	1	261041	junction_9	95185.36634404253	NA	1	NA	TRUE	NA	NA	NA	C	coding	507	1524	61	1584	10.0	-1	True	AGTAAA	-16
PB.8833.6	chr4	-	1994	10	novel_in_catalog	NUP54	novel	1671	4	NA	NA	8	-2	no_combination_of_known_junctions	FALSE	canonical	1	10536	junction_5	195949.67378656624	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	749	1294	20.0	7	True	AATAAA	-22
PB.5524.3	chr18	+	2690	13	novel_in_catalog	CNDP2	novel	547	5	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	1	4624	junction_2	404659.8200686854	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	210	1637	40.0	-30	True	AATAAA	-20
PB.3644.1	chr14	+	1582	5	full-splice_match	SERPINA3	ENST00000393078.4	1589	5	13	-6	0	3	multi-exon	FALSE	canonical	1	1559883	junction_1	502370.8679304439	NA	0	NA	TRUE	NA	NA	NA	A	coding	423	1272	67	1338	5.0	-2	True	AATAAA	-19
PB.5524.1	chr18	+	2423	12	full-splice_match	CNDP2	ENST00000324262.8	5130	12	77	2630	-22	-280	multi-exon	FALSE	canonical	1	377991	junction_1	250121.6227763295	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	240	1667	50.0	4	True	NA	NA
PB.7049.8	chr2	+	1759	8	full-splice_match	MFF	ENST00000337110.11	1760	8	-5	6	1	-4	multi-exon	FALSE	canonical	1	38956	junction_6	166714.25177304097	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	318	1049	30.0	-5	True	AATAAA	-10
PB.5524.7	chr18	+	2631	12	full-splice_match	CNDP2	ENST00000324262.8	5130	12	166	2333	0	0	multi-exon	FALSE	canonical	1	377991	junction_1	250121.6227763295	NA	4	1	TRUE	NA	NA	NA	C	coding	475	1428	151	1578	40.0	-3	True	AATAAA	-20
PB.5524.6	chr18	+	1859	8	novel_not_in_catalog	CNDP2	novel	547	5	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	469194.3418419819	NA	5	NA	TRUE	NA	NA	NA	C	coding	258	777	153	929	35.0	-6	True	AATAAA	-19
PB.5524.5	chr18	+	2724	13	novel_in_catalog	CNDP2	novel	547	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2088	junction_2	405103.2183619911	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	244	1671	40.0	-9	True	AATAAA	-20
PB.5524.4	chr18	+	2397	10	novel_in_catalog	CNDP2	novel	547	5	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	4227	junction_3	384614.8683842669	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	170	1345	35.0	-22	True	AATAAA	-19
PB.12338.1	chrX	-	2852	5	full-splice_match	NAA10	ENST00000477750.5	1062	5	57	-1847	-8	0	multi-exon	FALSE	canonical	1	1217541	junction_4	152551.5607137059	NA	1	NA	TRUE	NA	NA	NA	A	coding	118	357	120	476	15.0	13	True	AATAAA	-20
PB.12338.2	chrX	-	2356	6	novel_in_catalog	ARHGAP4	novel	1939	14	NA	NA	-67	-9185	intron_retention	FALSE	canonical	1	1217541	junction_5	261791.93591354185	NA	1	NA	TRUE	NA	NA	NA	C	coding	118	357	163	519	15.0	-1	True	AATAAA	-20
PB.10284.3	chr6	-	3384	4	novel_not_in_catalog	ZBTB2	novel	3090	3	NA	NA	-39	0	any annotated donor/acceptor	FALSE	canonical	1	5444	junction_2	25840.26698778478	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	688	1980	25.0	260	False	AATAAA	-17
PB.3745.1	chr15	+	5991	2	full-splice_match	KLF13	ENST00000307145.3	6825	2	833	1	121	0	multi-exon	TRUE	canonical	1	320890	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	52	159	234	392	15.0	-8143	False	AATAAA	-20
PB.3745.2	chr15	+	6071	2	novel_not_in_catalog	KLF13	novel	6825	2	NA	NA	5457	0	intron_retention	FALSE	canonical	1	39421	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	1202	1525	15.0	-5	True	AATAAA	-20
PB.11042.3	chr8	-	3263	12	novel_not_in_catalog	KCTD9	novel	3401	12	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	canonical	1	2775	junction_8	22696.995616524422	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	71	1012	40.0	114	False	ATTAAA	-17
PB.11042.4	chr8	-	3422	13	novel_in_catalog	KCTD9	novel	3401	12	NA	NA	2	-182	combination_of_known_junctions	FALSE	canonical	1	147	junction_2	21958.913107304896	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	767	1594	25.0	-10	True	AATAAA	-18
PB.4072.1	chr15	+	4645	5	novel_in_catalog	ZNF710	novel	4617	5	NA	NA	-192	-8	intron_retention	TRUE	canonical	1	2280	junction_1	55543.30291031944	NA	0	NA	TRUE	NA	NA	NA	B	coding	664	1995	288	2282	25.0	-7540	False	AATAAA	-15
PB.4072.2	chr15	+	4460	5	novel_not_in_catalog	ZNF710	novel	4617	5	NA	NA	908	-5	intron_retention	FALSE	canonical	1	10131	junction_1	52237.60954523092	NA	2	1	TRUE	NA	NA	NA	B	coding	664	1995	100	2094	20.0	-6440	False	AATAAA	-18
PB.10284.4	chr6	-	3103	3	full-splice_match	ZBTB2	ENST00000325144.4	3090	3	-13	0	-13	0	multi-exon	FALSE	canonical	1	61529	junction_2	47330.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	155	1699	25.0	-3	True	AATAAA	-17
PB.9803.3	chr6	+	2071	3	novel_not_in_catalog	HMGN4	novel	1225	2	NA	NA	-40	680	any annotated donor/acceptor	FALSE	canonical	1	20859	junction_1	7987.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	1652	1951	30.0	-3	True	NA	NA
PB.9803.2	chr6	+	1518	2	full-splice_match	HMGN4	ENST00000377575.2	1225	2	-45	-248	-45	248	multi-exon	FALSE	canonical	1	468448	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-8	True	NA	NA
PB.9803.1	chr6	+	1914	2	full-splice_match	HMGN4	ENST00000377575.2	1225	2	-10	-679	-10	679	multi-exon	FALSE	canonical	1	468448	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	1496	1795	30.0	27	True	NA	NA
PB.7499.5	chr21	-	2246	6	novel_in_catalog	TMEM50B	novel	3062	9	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	3671	junction_1	120028.05464123792	NA	5	NA	TRUE	NA	NA	NA	C	coding	126	381	147	527	20.0	0	True	AATAAA	-21
PB.1782.1	chr11	+	2306	1	intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	218	657	448	1104	75.0	NA	False	NA	NA
PB.8384.2	chr3	-	4068	3	full-splice_match	RAB43	ENST00000315150.9	4467	3	390	9	381	-9	multi-exon	FALSE	canonical	1	21	junction_1	18.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	156	471	80	550	30.0	403	False	ATTAAA	-12
PB.858.22	chr1	-	1650	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-4	8898	any annotated donor/acceptor	FALSE	canonical	1	491	junction_1	109927.84317703843	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	81	815	45.0	-4	True	NA	NA
PB.858.24	chr1	-	2709	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-7	8591	any annotated donor/acceptor	FALSE	canonical	1	26823	junction_1	97526.95016592422	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	84	842	25.0	-7	True	NA	NA
PB.858.25	chr1	-	1763	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-2	8450	any annotated donor/acceptor	FALSE	canonical	1	25273	junction_1	98256.82824901053	NA	2	NA	TRUE	NA	NA	NA	C	coding	246	741	79	819	30.0	-2	True	NA	NA
PB.858.26	chr1	-	2509	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-21	8428	any annotated donor/acceptor	FALSE	canonical	1	7741	junction_1	106513.21845459161	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	98	805	30.0	1	True	NA	NA
PB.858.27	chr1	-	2438	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-21	8306	any annotated donor/acceptor	FALSE	canonical	1	26823	junction_1	97526.95016592422	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	98	856	15.0	1	True	TTTAAA	-30
PB.8615.10	chr3	-	1568	7	novel_in_catalog	SDHAP1	novel	2491	17	NA	NA	3	3262	combination_of_known_junctions	FALSE	canonical	1	5793	junction_1	49367.81191446733	NA	0	NA	TRUE	NA	NA	NA	B	coding	161	486	378	863	10.0	NA	False	NA	NA
PB.858.29	chr1	-	2616	3	incomplete-splice_match	SLAMF1	ENST00000538290.2	1087	8	-65	22010	-2	4236	3prime_fragment	FALSE	canonical	1	227876	junction_2	5605.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	79	984	50.0	-2	True	AATAAA	-25
PB.9002.22	chr4	-	2264	20	novel_not_in_catalog	INPP4B	novel	8831	27	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	5366	junction_11	48235.86123997712	NA	0	NA	TRUE	NA	NA	NA	B	coding	638	1914	349	2262	65.0	605	False	TTTAAA	-37
PB.11208.1	chr8	-	3593	4	full-splice_match	PMP2	ENST00000256103.2	3608	4	10	5	10	-5	multi-exon	FALSE	canonical	1	151084	junction_3	35119.3443592306	NA	2	NA	TRUE	NA	NA	NA	A	coding	132	399	128	526	35.0	-75	False	AATAAA	-20
PB.189.2	chr1	-	3396	4	full-splice_match	STMN1	ENST00000465604.1	2947	4	-2	-447	-2	-3	multi-exon	FALSE	canonical	1	3698624	junction_3	2345635.486480417	NA	3	1	TRUE	NA	NA	NA	C	coding	112	339	94	432	35.0	-1	True	AATAAA	-18
PB.8572.1	chr3	-	2354	3	novel_not_in_catalog	EHHADH	novel	312	3	NA	NA	-931	-29715	any annotated donor/acceptor	TRUE	canonical	1	26	junction_1	609.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-65	False	NA	NA
PB.189.1	chr1	-	1441	5	full-splice_match	STMN1	ENST00000455785.6	1504	5	47	16	-2	0	multi-exon	FALSE	canonical	1	3698624	junction_4	2033726.112171757	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	94	543	40.0	-1	True	AATAAA	-21
PB.189.6	chr1	-	831	6	novel_not_in_catalog	STMN1	novel	948	5	NA	NA	-2	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	3077161.068671616	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	94	543	15.0	-1	True	AATAAA	-19
PB.8273.9	chr3	-	3171	5	novel_not_in_catalog	ZBTB11	novel	6020	11	NA	NA	-43	-555	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	67262.51423852293	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	248	1696	25.0	-1	True	AATAAA	-25
PB.189.5	chr1	-	2792	5	novel_not_in_catalog	STMN1	novel	948	5	NA	NA	-2	5	intron_retention	FALSE	non_canonical	0	0	junction_1	3348843.937729435	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	94	432	20.0	-1	True	AATAAA	-22
PB.11617.5	chr9	-	4007	17	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	-258	-5	any annotated donor/acceptor	TRUE	canonical	0	0	junction_12	96288.81978575901	NA	3	1	TRUE	NA	NA	NA	B	coding	467	1404	2094	3497	20.0	58	False	AGTAAA	-13
PB.8327.9	chr3	-	4530	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-45	3418	-45	-3418	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	142	1257	60.0	0	True	NA	NA
PB.8327.8	chr3	-	4654	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-8	3257	-8	-3257	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	105	1220	80.0	6	True	NA	NA
PB.11753.1	chr9	-	5245	4	incomplete-splice_match	MEGF9	ENST00000373930.3	6298	6	91741	112	91741	-112	5prime_fragment	FALSE	canonical	1	180819	junction_2	21773.074232996027	NA	0	NA	TRUE	NA	NA	NA	A	coding	74	225	756	980	20.0	NA	False	AATAAA	-18
PB.8240.8	chr3	-	2011	14	incomplete-splice_match	GBE1	ENST00000429644.6	3461	16	630	45433	630	-465	3prime_fragment	FALSE	canonical	1	462409	junction_7	76690.77287307661	NA	0	NA	TRUE	NA	NA	NA	B	coding	651	1956	15	1970	85.0	11	True	NA	NA
PB.11849.3	chr9	+	4908	25	novel_in_catalog	USP20	novel	590	3	NA	NA	5	0	intron_retention	FALSE	canonical	1	93010	junction_1	55499.626947695186	NA	2	NA	TRUE	NA	NA	NA	C	coding	547	1644	178	1821	20.0	-7	True	AATAAA	-16
PB.8240.5	chr3	-	2684	16	novel_not_in_catalog	GBE1	novel	3461	16	NA	NA	619	76	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	168936.94244574083	NA	0	NA	TRUE	NA	NA	NA	B	coding	702	2109	26	2134	10.0	0	True	TATAAA	-44
PB.7055.5	chr2	+	3131	26	novel_not_in_catalog	SP140	novel	580	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	720	junction_9	46417.83624847673	NA	1	1	TRUE	NA	NA	NA	C	coding	834	2505	97	2601	15.0	7	True	NA	NA
PB.8240.7	chr3	-	3574	14	incomplete-splice_match	GBE1	ENST00000429644.6	3461	16	436	44064	436	904	3prime_fragment	FALSE	canonical	1	462409	junction_7	76690.77287307661	NA	1	NA	TRUE	NA	NA	NA	B	coding	651	1956	209	2164	35.0	44	False	NA	NA
PB.7055.7	chr2	+	3180	27	novel_not_in_catalog	SP140	novel	580	5	NA	NA	10	1	any annotated donor/acceptor	FALSE	canonical	1	2538	junction_24	46779.91451283769	NA	0	NA	TRUE	NA	NA	NA	C	coding	858	2577	72	2648	25.0	8	True	NA	NA
PB.7055.1	chr2	+	3257	27	full-splice_match	SP140	ENST00000392045.7	3246	27	-9	-2	-8	0	multi-exon	FALSE	canonical	1	2538	junction_24	42619.77330486041	NA	0	NA	TRUE	NA	NA	NA	C	coding	867	2604	124	2727	15.0	-20	True	NA	NA
PB.7055.2	chr2	+	2746	22	novel_in_catalog	SP140	novel	580	5	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	482	junction_6	50012.831958306415	NA	1	1	TRUE	NA	NA	NA	C	coding	699	2100	117	2216	15.0	-13	True	NA	NA
PB.8240.2	chr3	-	2831	16	novel_not_in_catalog	GBE1	novel	3461	16	NA	NA	629	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	209102.2884884174	NA	15	NA	TRUE	NA	NA	NA	B	coding	375	1128	16	1143	15.0	10	True	AATAAA	-17
PB.5519.7	chr18	-	1906	5	novel_not_in_catalog	CD226	novel	474	4	NA	NA	1526	-172	any annotated donor/acceptor	FALSE	canonical	1	29721	junction_4	58334.025563987954	NA	0	NA	TRUE	NA	NA	NA	C	coding	212	639	82	720	60.0	3072	False	AAGAAA	-43
PB.5519.6	chr18	-	2698	6	full-splice_match	CD226	ENST00000582621.5	1458	6	-54	-1186	-54	-172	multi-exon	FALSE	canonical	1	100831	junction_5	31487.365431868067	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	502	1512	60.0	-5	True	AAGAAA	-43
PB.5519.5	chr18	-	2585	6	full-splice_match	CD226	ENST00000582621.5	1458	6	233	-1360	-201	2	multi-exon	FALSE	canonical	1	100831	junction_5	31487.365431868067	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	215	1225	40.0	9571	False	AATAAA	-24
PB.5519.4	chr18	-	2507	7	novel_not_in_catalog	CD226	novel	474	4	NA	NA	-20	16	any annotated donor/acceptor	FALSE	canonical	1	1042	junction_6	57181.08448604311	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	123	1133	40.0	-1	True	AATAAA	-38
PB.5519.3	chr18	-	2656	6	full-splice_match	CD226	ENST00000582621.5	1458	6	330	-1528	-104	170	multi-exon	FALSE	canonical	1	100831	junction_5	31487.365431868067	NA	2	NA	TRUE	NA	NA	NA	C	coding	336	1011	118	1128	20.0	9668	False	AATAAA	-16
PB.5519.2	chr18	-	2535	5	novel_not_in_catalog	CD226	novel	474	4	NA	NA	1473	404	any annotated donor/acceptor	FALSE	canonical	1	29721	junction_4	58334.025563987954	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	135	773	40.0	3019	False	AATAAA	-35
PB.5519.1	chr18	-	2908	6	full-splice_match	CD226	ENST00000582621.5	1458	6	312	-1762	-122	404	multi-exon	FALSE	canonical	1	100831	junction_5	31487.365431868067	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	136	1146	40.0	-1	True	AATAAA	-35
PB.8327.4	chr3	-	5139	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	3	2761	3	-2761	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	3	NA	TRUE	NA	NA	NA	C	coding	371	1116	94	1209	100.0	17	True	NA	NA
PB.7136.4	chr20	-	3721	6	novel_not_in_catalog	AL049650.1	novel	823	7	NA	NA	0	-14611	intron_retention	FALSE	canonical	1	7348	junction_1	35832.57510366789	NA	0	NA	TRUE	NA	NA	NA	B	coding	549	1650	734	2383	45.0	7	True	AATAAA	-25
PB.7136.5	chr20	-	3408	6	full-splice_match	ZNF343	ENST00000278772.8	3632	6	217	7	0	-1	multi-exon	FALSE	canonical	1	39903	junction_5	26042.16767014605	NA	10	NA	TRUE	NA	NA	NA	A	coding	599	1800	272	2071	45.0	-1	True	AATAAA	-24
PB.7136.6	chr20	-	3626	5	novel_in_catalog	AL049650.1	novel	823	7	NA	NA	-25	-14611	intron_retention	FALSE	canonical	1	39903	junction_4	25763.03637360123	NA	2	NA	TRUE	NA	NA	NA	B	coding	509	1530	759	2288	45.0	-18	True	AATAAA	-25
PB.7136.1	chr20	-	3633	7	novel_in_catalog	AL049650.1	novel	823	7	NA	NA	-27	-14610	no_combination_of_known_junctions	FALSE	canonical	1	6454	junction_1	40868.3614619345	NA	0	NA	TRUE	NA	NA	NA	B	coding	640	1923	372	2294	40.0	-20	True	AATAAA	-26
PB.3149.41	chr13	-	1953	10	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	23	15770	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_9	113028.51387095446	NA	0	NA	TRUE	NA	NA	NA	B	coding	541	1623	330	1952	50.0	4	True	AAGAAA	-13
PB.3149.40	chr13	-	2432	12	novel_in_catalog	ZC3H13	novel	8018	19	NA	NA	18	-13477	no_combination_of_known_junctions	FALSE	canonical	1	63974	junction_11	106213.05605618072	NA	1	NA	TRUE	NA	NA	NA	B	coding	699	2097	335	2431	70.0	-1	True	NA	NA
PB.6475.1	chr2	+	1308	10	full-splice_match	CFAP36	ENST00000349456.8	2048	10	-61	801	-11	-1	multi-exon	FALSE	canonical	1	452571	junction_1	142166.0851180846	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	210	1238	25.0	1	True	AATAAA	-20
PB.11238.10	chr8	+	2504	2	full-splice_match	PDP1	ENST00000297598.4	4272	2	79	1689	0	-15	multi-exon	FALSE	canonical	1	141776	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	191	1804	70.0	8	True	NA	NA
PB.2155.1	chr11	+	967	8	full-splice_match	MRPL48	ENST00000310614.11	1536	8	561	8	0	1	multi-exon	FALSE	canonical	1	207060	junction_6	105221.5296243587	NA	0	NA	TRUE	NA	NA	NA	A	coding	212	639	96	734	20.0	-14	True	AATAAA	-18
PB.11413.10	chr8	+	2608	5	full-splice_match	ZNF7	ENST00000446747.6	2242	5	1	-367	0	-185	multi-exon	FALSE	canonical	1	13046	junction_2	56667.27000383467	NA	1	NA	TRUE	NA	NA	NA	C	coding	697	2094	96	2189	100.0	0	True	NA	NA
PB.1116.4	chr1	+	4233	9	full-splice_match	VASH2	ENST00000366968.8	4224	9	-12	3	-12	-3	multi-exon	FALSE	canonical	1	9094	junction_2	21438.992815370315	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	405	1235	20.0	-12	True	AATAAA	-16
PB.8327.3	chr3	-	5554	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-57	2406	-57	-2406	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	6	NA	TRUE	NA	NA	NA	C	coding	371	1116	154	1269	75.0	10	False	NA	NA
PB.8327.2	chr3	-	6233	4	full-splice_match	LRRC58	ENST00000295628.3	7903	4	-8	1678	-8	-1678	multi-exon	FALSE	canonical	1	173498	junction_3	52840.73764309755	NA	3	NA	TRUE	NA	NA	NA	C	coding	371	1116	105	1220	90.0	6	True	NA	NA
PB.1016.1	chr1	+	3053	15	incomplete-splice_match	CFH	ENST00000367429.8	4127	22	37404	8	12294	-8	5prime_fragment	TRUE	canonical	1	111499	junction_14	191262.19294942069	NA	0	NA	TRUE	NA	NA	NA	A	coding	892	2679	192	2870	35.0	NA	False	ATTAAA	-7
PB.1051.32	chr1	+	4453	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	-21	combination_of_known_junctions	FALSE	canonical	1	19678	junction_6	191650.6123890845	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	407	2839	35.0	25	False	TTTAAA	-21
PB.1051.33	chr1	+	6004	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	19678	junction_6	187669.7920092695	NA	9	1	TRUE	NA	NA	NA	C	coding	810	2433	1939	4371	15.0	25	False	TTTAAA	-40
PB.195.4	chr1	-	2645	14	full-splice_match	UBXN11	ENST00000472155.5	2646	14	-6	7	-1	-4	multi-exon	FALSE	canonical	1	75548	junction_11	144228.79750996883	NA	3	NA	TRUE	NA	NA	NA	C	coding	324	975	91	1065	10.0	-11	True	AATAAA	-11
PB.5047.5	chr17	-	2144	6	novel_in_catalog	DCAKD	novel	2045	4	NA	NA	18	0	no_combination_of_known_junctions	FALSE	canonical	1	27861	junction_2	181284.43403381328	NA	6	NA	TRUE	NA	NA	NA	C	coding	130	393	665	1057	35.0	9618	False	NA	NA
PB.5047.4	chr17	-	2150	5	full-splice_match	DCAKD	ENST00000614054.4	2054	5	-96	0	-3	0	multi-exon	FALSE	canonical	1	97208	junction_4	139762.99057757566	NA	3	NA	TRUE	NA	NA	NA	C	coding	231	696	368	1063	35.0	-6	True	NA	NA
PB.5047.3	chr17	-	2218	6	novel_in_catalog	DCAKD	novel	2045	4	NA	NA	10	-1	no_combination_of_known_junctions	FALSE	canonical	1	27861	junction_2	182559.46827157444	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	738	1130	30.0	18	True	NA	NA
PB.5047.2	chr17	-	1958	5	full-splice_match	DCAKD	ENST00000588499.5	990	5	1	-969	1	-2	multi-exon	FALSE	canonical	1	60244	junction_4	154501.46522828675	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	172	867	25.0	-2	True	NA	NA
PB.5047.1	chr17	-	2038	5	full-splice_match	DCAKD	ENST00000342350.9	2030	5	-10	2	-10	0	multi-exon	FALSE	canonical	1	86372	junction_4	144055.55394946598	NA	2	NA	TRUE	NA	NA	NA	C	coding	231	696	256	951	35.0	-15	True	NA	NA
PB.195.2	chr1	-	2337	10	novel_in_catalog	UBXN11	novel	2254	11	NA	NA	-50	0	intron_retention	FALSE	canonical	1	21148	junction_6	167122.8136549604	NA	2	NA	TRUE	NA	NA	NA	C	coding	208	627	1696	2322	15.0	1	True	AATAAA	-15
PB.11152.2	chr8	-	5146	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-2	5	combination_of_known_junctions	TRUE	canonical	1	345915	junction_11	791679.926981414	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	191	2338	15.0	30	True	AATAAA	-24
PB.1051.31	chr1	+	4510	18	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	2512	junction_1	199049.7247408417	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	353	2785	25.0	25	False	AATAAA	-18
PB.6447.2	chr2	+	4599	1	genic	PRKCE	novel	NA	NA	NA	NA	-98	-30502	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	139	420	855	1274	95.0	-8605	False	NA	NA
PB.11044.6	chr8	+	3493	11	novel_not_in_catalog	PPP2R2A	novel	3940	10	NA	NA	-11	-496	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	304375.758269347	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	856	1722	35.0	-11	True	AATAAA	-37
PB.1974.1	chr11	-	2455	7	full-splice_match	CYB561A3	ENST00000294072.8	3061	7	543	63	84	10	multi-exon	TRUE	canonical	1	273624	junction_6	69487.3681638133	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	136	864	20.0	534	False	ATTAAA	-14
PB.1974.2	chr11	-	2752	8	full-splice_match	CYB561A3	ENST00000426130.6	3205	8	399	54	1	10	multi-exon	FALSE	canonical	1	7457	junction_6	178993.8785335683	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	382	1161	20.0	-3	True	ATTAAA	-14
PB.1974.3	chr11	-	2726	8	novel_in_catalog	CYB561A3	novel	3061	7	NA	NA	1	10	combination_of_known_junctions	FALSE	canonical	1	1635	junction_7	185819.68216427628	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	407	1135	20.0	0	True	ATTAAA	-14
PB.7160.10	chr20	-	2606	18	novel_not_in_catalog	SLC23A2	novel	6944	17	NA	NA	-8	-2455	any annotated donor/acceptor	FALSE	canonical	1	2131	junction_1	60820.130240038336	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	420	2336	15.0	-6	True	AATAAA	-20
PB.1481.5	chr10	+	2691	11	full-splice_match	ADK	ENST00000286621.6	1169	11	-8	-1514	-8	686	multi-exon	FALSE	canonical	1	176788	junction_1	175027.3052308125	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	59	1147	80.0	0	True	NA	NA
PB.1481.4	chr10	+	2868	11	full-splice_match	ADK	ENST00000286621.6	1169	11	-8	-1691	-8	863	multi-exon	FALSE	canonical	1	176788	junction_1	175027.3052308125	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	59	1147	40.0	0	True	TATAAA	-5
PB.1481.7	chr10	+	1447	11	full-splice_match	ADK	ENST00000372734.3	2083	11	37	599	37	229	multi-exon	FALSE	canonical	1	330053	junction_1	133978.61027496142	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	151	1188	30.0	-67	False	ATTAAA	-23
PB.1481.6	chr10	+	1742	11	full-splice_match	ADK	ENST00000286621.6	1169	11	-7	-566	-7	-258	multi-exon	FALSE	canonical	1	176788	junction_1	175027.3052308125	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	58	1146	40.0	1	True	AATAAA	-31
PB.1481.1	chr10	+	2036	11	full-splice_match	ADK	ENST00000286621.6	1169	11	-44	-823	0	-1	multi-exon	FALSE	canonical	1	176788	junction_1	175027.3052308125	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	95	1183	25.0	-50	False	AATAAA	-27
PB.1051.34	chr1	+	6058	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	0	intron_retention	FALSE	canonical	1	19678	junction_5	195973.3458716743	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	2909	4333	25.0	25	False	AATAAA	-18
PB.1481.3	chr10	+	1254	11	full-splice_match	ADK	ENST00000286621.6	1169	11	-8	-77	-8	77	multi-exon	FALSE	canonical	1	176788	junction_1	175027.3052308125	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	59	1147	40.0	0	True	AATAAA	-32
PB.1481.2	chr10	+	1441	1	novel_in_catalog	ADK	novel	1866	10	NA	NA	17	-71951	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-33	False	AATAAA	-19
PB.585.4	chr1	+	2899	15	full-splice_match	GPSM2	ENST00000264126.8	3029	15	112	18	94	-18	multi-exon	FALSE	canonical	1	78176	junction_1	59551.26906429759	NA	1	NA	TRUE	NA	NA	NA	C	coding	684	2055	381	2435	10.0	-8176	False	TATAAA	-20
PB.11152.6	chr8	-	5207	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	6709	junction_11	810082.9059154569	NA	3	NA	TRUE	NA	NA	NA	C	coding	744	2235	171	2405	15.0	50	True	AATAAA	-18
PB.1051.35	chr1	+	5913	19	novel_in_catalog	ZC3H11A	novel	944	3	NA	NA	-6	0	intron_retention	FALSE	canonical	1	14318	junction_1	193549.80577443363	NA	4	1	TRUE	NA	NA	NA	C	coding	810	2433	1762	4194	25.0	25	False	AATAAA	-12
PB.1481.9	chr10	+	2015	11	full-splice_match	ADK	ENST00000372734.3	2083	11	63	5	63	-1	multi-exon	FALSE	canonical	1	330053	junction_1	133978.61027496142	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	125	1162	25.0	-14	True	AATAAA	-27
PB.1481.8	chr10	+	2706	11	full-splice_match	ADK	ENST00000372734.3	2083	11	63	-686	63	686	multi-exon	FALSE	canonical	1	330053	junction_1	133978.61027496142	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	125	1162	80.0	-14	True	NA	NA
PB.9468.3	chr5	-	2786	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	19	5921	19	-5921	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	29	NA	NA	NA	NA	NA	C	coding	305	918	292	1209	30.0	5	True	AATAAA	-17
PB.6461.8	chr2	+	2882	22	full-splice_match	PPP1R21	ENST00000294952.12	3142	22	1	259	1	-258	multi-exon	FALSE	canonical	1	142046	junction_11	46175.87495921905	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	157	2499	50.0	0	True	AATAGA	-14
PB.6461.9	chr2	+	2849	21	full-splice_match	PPP1R21	ENST00000281394.8	3137	21	29	259	1	-258	multi-exon	FALSE	canonical	1	11877	junction_17	64061.110873348895	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	157	2466	50.0	0	True	AATAGA	-14
PB.380.1	chr1	+	1341	2	full-splice_match	TMEM69	ENST00000496366.1	722	2	-29	-590	-29	-8	multi-exon	FALSE	canonical	1	62464	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	173	811	15.0	-29	True	ATTAAA	-14
PB.11104.7	chr8	+	5080	11	novel_in_catalog	GPAT4	novel	572	2	NA	NA	-2	515	intron_retention	FALSE	canonical	1	250447	junction_7	157408.00518083572	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	3447	4172	20.0	-2	True	AATAAA	-13
PB.380.3	chr1	+	1142	3	full-splice_match	TMEM69	ENST00000372025.4	2439	3	981	316	-1	282	multi-exon	FALSE	canonical	1	132160	junction_2	164845.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	177	920	55.0	-1	True	ATTAAA	-15
PB.380.2	chr1	+	1470	3	full-splice_match	TMEM69	ENST00000372025.4	2439	3	967	2	-15	-2	multi-exon	FALSE	canonical	1	132160	junction_2	164845.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	191	934	25.0	-15	True	ATTAAA	-20
PB.7227.11	chr20	+	3174	18	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	20	-8	any annotated donor/acceptor	FALSE	canonical	1	17640	junction_1	300507.9891321743	NA	2	NA	TRUE	NA	NA	NA	C	coding	740	2223	235	2457	10.0	-32	True	AATAAA	-17
PB.7227.10	chr20	+	3062	17	novel_in_catalog	TPX2	novel	3497	18	NA	NA	20	-308	no_combination_of_known_junctions	FALSE	canonical	1	44756	junction_1	253053.65857047462	NA	1	NA	TRUE	NA	NA	NA	C	coding	747	2244	402	2645	35.0	-32	True	AATAAA	-20
PB.7227.13	chr20	+	2356	14	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	20	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	237192.28193775666	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	509	2050	15.0	-32	True	AATAAA	-20
PB.7227.12	chr20	+	2779	17	novel_not_in_catalog	TPX2	novel	3497	18	NA	NA	20	-317	any annotated donor/acceptor	FALSE	canonical	1	1495	junction_1	261390.3258866123	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	128	2371	40.0	-32	True	AATAAA	-11
PB.7227.15	chr20	+	4301	17	novel_in_catalog	TPX2	novel	3497	18	NA	NA	41	-4	intron_retention	FALSE	canonical	1	581217	junction_6	165323.96415064688	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	488	2557	15.0	-11	True	AATAAA	-21
PB.7227.14	chr20	+	2143	14	incomplete-splice_match	TPX2	ENST00000300403.10	3497	18	33	7819	33	-7819	3prime_fragment	FALSE	canonical	1	581217	junction_6	135317.60182875837	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1647	496	2142	70.0	-19	True	NA	NA
PB.6461.4	chr2	+	3085	22	novel_not_in_catalog	PPP1R21	novel	2481	21	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	3820	junction_7	63638.218882485606	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	159	2444	25.0	-2	True	AATAAA	-17
PB.7227.16	chr20	+	3282	18	full-splice_match	TPX2	ENST00000300403.10	3497	18	207	8	207	-8	multi-exon	FALSE	canonical	1	581217	junction_6	161232.20368062126	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	322	2565	10.0	-8313	False	AATAAA	-17
PB.1109.12	chr1	+	2592	15	full-splice_match	DTL	ENST00000366991.4	4573	15	172	1809	-97	-1397	multi-exon	FALSE	canonical	1	190727	junction_8	41893.95408891457	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	143	2335	30.0	-44	True	AGTAAA	-21
PB.1051.39	chr1	+	4975	20	novel_not_in_catalog	ZC3H11A	novel	944	3	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	7234	junction_3	194301.06225149913	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	816	3248	30.0	31	False	AATAAA	-20
PB.11050.19	chr8	+	4016	21	novel_in_catalog	PTK2B	novel	4719	36	NA	NA	2	4252	combination_of_known_junctions	FALSE	canonical	1	53763	junction_1	156906.62392219136	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	175	2217	35.0	-6	True	NA	NA
PB.1510.1	chr10	-	3278	1	full-splice_match	AC067750.1	ENST00000608826.1	6545	1	-122	3389	-122	-3389	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-151	False	AATAGA	-18
PB.12243.1	chrX	+	2087	1	antisense	novelGene_NKAPP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6517.6	chr2	+	1731	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	25	530	25	-530	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	3	NA	TRUE	NA	NA	NA	C	coding	252	759	67	825	40.0	9	True	ATTAAA	-25
PB.6403.11	chr2	+	4750	7	novel_not_in_catalog	YIPF4	novel	11949	6	NA	NA	0	4380	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	174699.81197439478	NA	2	NA	TRUE	NA	NA	NA	C	coding	244	735	247	981	35.0	0	True	AATAAA	-18
PB.1679.10	chr10	-	3518	11	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	-70	2	intron_retention	FALSE	canonical	1	319897	junction_10	387907.57552139915	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	2542	3276	50.0	-1	True	AATAAA	-4
PB.1679.11	chr10	-	2179	11	full-splice_match	TIAL1	ENST00000489822.5	2222	11	1	42	1	-4	multi-exon	FALSE	canonical	1	319897	junction_10	422505.32932047144	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	499	1413	70.0	-2	True	NA	NA
PB.1679.12	chr10	-	1970	13	novel_in_catalog	TIAL1	novel	5072	12	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	1	28233	junction_8	501715.78501702537	NA	3	1	TRUE	NA	NA	NA	C	coding	252	759	988	1746	70.0	14	True	NA	NA
PB.1679.13	chr10	-	1628	12	full-splice_match	TIAL1	ENST00000369093.6	5072	12	-195	3639	-58	-4	multi-exon	FALSE	canonical	1	235798	junction_10	436958.1770937666	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	226	1404	70.0	668	False	NA	NA
PB.6155.2	chr19	-	3324	3	full-splice_match	NUP62	ENST00000352066.7	2870	3	260	-714	4	-4	multi-exon	FALSE	canonical	1	93948	junction_2	129031.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	522	1569	346	1914	40.0	3	True	AATAAA	-15
PB.6155.3	chr19	-	3244	3	novel_in_catalog	IL4I1	novel	2261	11	NA	NA	10	-10859	intron_retention	FALSE	canonical	1	26258	junction_2	162876.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	522	1569	266	1834	40.0	-8	True	AATAAA	-15
PB.7225.15	chr20	+	1976	9	novel_in_catalog	HM13	novel	3810	13	NA	NA	1	-11	intron_retention	FALSE	canonical	1	21924	junction_1	712733.0730955664	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	878	1639	15.0	-34	True	ATTAAA	-31
PB.6155.1	chr19	-	3400	3	full-splice_match	NUP62	ENST00000597029.5	2053	3	-71	-1276	0	-4	multi-exon	FALSE	canonical	1	67824	junction_2	142093.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	422	1990	40.0	3093	False	AATAAA	-15
PB.3100.5	chr13	-	5716	14	full-splice_match	STARD13	ENST00000336934.9	5917	14	-46	247	-46	-212	multi-exon	FALSE	canonical	1	40553	junction_13	20398.41391473088	NA	1	NA	TRUE	NA	NA	NA	C	coding	1113	3342	164	3505	65.0	-74	False	NA	NA
PB.7225.19	chr20	+	2634	4	novel_not_in_catalog	HM13	novel	3810	13	NA	NA	-2	569	intron_retention	FALSE	canonical	1	6652	junction_3	964878.0246871737	NA	1	NA	TRUE	NA	NA	NA	C	coding	181	546	101	646	35.0	-13	True	NA	NA
PB.7225.18	chr20	+	2417	9	novel_in_catalog	HM13	novel	3810	13	NA	NA	-11	-10	intron_retention	FALSE	canonical	1	52228	junction_1	703493.5465747003	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	1630	2079	15.0	-22	True	ATTAAA	-32
PB.6750.4	chr2	-	2618	4	novel_not_in_catalog	LYPD1	novel	1891	3	NA	NA	108	-162	any annotated donor/acceptor	FALSE	canonical	1	76	junction_3	61379.461762239516	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	1163	1588	5.0	54	False	AATAAA	-14
PB.6155.8	chr19	-	2430	2	full-splice_match	NUP62	ENST00000422090.2	3479	2	315	734	0	-16	multi-exon	FALSE	canonical	1	193034	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	182	1750	100.0	8	True	NA	NA
PB.6155.9	chr19	-	2889	4	full-splice_match	NUP62	ENST00000596437.5	894	4	27	-2022	0	-16	multi-exon	FALSE	canonical	1	4245	junction_2	40823.74670322273	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	641	2209	100.0	3103	False	NA	NA
PB.9995.22	chr6	+	2366	17	novel_not_in_catalog	PPP2R5D	novel	3044	16	NA	NA	16	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	233148.3861799444	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	109	1821	20.0	-19	True	AATAAA	-14
PB.9995.23	chr6	+	2879	16	full-splice_match	PPP2R5D	ENST00000394110.7	2894	16	18	-3	17	3	multi-exon	FALSE	non_canonical	0	0	junction_3	204052.01949596632	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	108	1820	20.0	-18	True	AATAAA	-19
PB.9995.20	chr6	+	3109	15	novel_in_catalog	PPP2R5D	novel	3044	16	NA	NA	13	0	intron_retention	FALSE	canonical	1	190627	junction_2	156678.2382921985	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	1207	2055	20.0	-22	True	AATAAA	-14
PB.9995.21	chr6	+	2979	16	full-splice_match	PPP2R5D	ENST00000485511.5	3044	16	68	-3	13	3	multi-exon	FALSE	canonical	1	190627	junction_2	151369.0537092264	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	112	1920	20.0	-22	True	AATAAA	-19
PB.9995.26	chr6	+	1876	11	full-splice_match	KLHDC3	ENST00000326974.8	1909	11	26	7	-16	0	multi-exon	FALSE	canonical	1	691015	junction_1	314561.8813602341	NA	8	1	TRUE	NA	NA	NA	C	coding	382	1149	170	1318	15.0	-10	True	ATTAAA	-7
PB.9995.27	chr6	+	1699	10	novel_in_catalog	KLHDC3	novel	1903	10	NA	NA	-16	0	intron_retention	FALSE	canonical	1	17975	junction_2	536169.2370096922	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	170	1141	15.0	-10	True	ATTAAA	-7
PB.7047.3	chr2	+	4779	7	full-splice_match	RHBDD1	ENST00000341329.7	4883	7	94	10	-4	4	multi-exon	FALSE	canonical	1	47157	junction_1	56981.20252158211	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	149	1096	50.0	-24	True	NA	NA
PB.12330.4	chrX	-	3173	6	novel_in_catalog	BCAP31	novel	1824	8	NA	NA	10	-2	intron_retention	FALSE	canonical	1	1555889	junction_5	806757.1557423213	NA	5	NA	TRUE	NA	NA	NA	C	coding	337	1014	137	1150	10.0	-44	True	AATAAA	-16
PB.9420.2	chr5	+	1961	5	full-splice_match	PHAX	ENST00000297540.4	4288	5	671	1656	14	118	multi-exon	FALSE	canonical	1	334636	junction_4	41985.22598486282	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	25	1209	90.0	-8	True	NA	NA
PB.9420.3	chr5	+	2360	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	10	740	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	29	1213	85.0	-12	True	NA	NA
PB.9420.1	chr5	+	2673	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	45	1229	35.0	-28	True	AATAAA	-22
PB.9420.6	chr5	+	1620	5	full-splice_match	PHAX	ENST00000297540.4	4288	5	667	2001	10	42	multi-exon	FALSE	canonical	1	334636	junction_4	41985.22598486282	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	29	1213	20.0	-12	True	TATAAA	-22
PB.9420.7	chr5	+	2440	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	11	-517	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	28	1212	90.0	-11	True	NA	NA
PB.9420.4	chr5	+	1991	4	incomplete-splice_match	PHAX	ENST00000297540.4	4288	5	667	8871	10	1048	3prime_fragment	FALSE	canonical	1	355882	junction_3	35933.13614046078	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	29	1108	90.0	-12	True	NA	NA
PB.9420.5	chr5	+	1925	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	10	741	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	29	1213	90.0	-12	True	NA	NA
PB.12330.1	chrX	-	3806	8	full-splice_match	BCAP31	ENST00000345046.11	1643	8	326	-2489	15	2489	multi-exon	FALSE	canonical	1	1555889	junction_7	738190.1571333025	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	132	872	30.0	-39	True	NA	NA
PB.6149.1	chr19	+	1660	13	full-splice_match	PTOV1	ENST00000599732.5	1577	13	-86	3	-54	1	multi-exon	FALSE	canonical	1	323866	junction_1	311951.00620515674	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	393	1475	5.0	-8974	False	AATAAA	-16
PB.2117.1	chr11	+	2827	10	full-splice_match	ALDH3B1	ENST00000342456.10	2786	10	-43	2	-14	-2	multi-exon	TRUE	canonical	1	96762	junction_2	50190.464105602805	NA	1	NA	TRUE	NA	NA	NA	A	coding	468	1407	86	1492	35.0	-18	True	NA	NA
PB.8038.18	chr3	+	3074	14	novel_in_catalog	CTNNB1	novel	3278	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	11715	junction_13	823790.1665939857	NA	2	NA	TRUE	NA	NA	NA	C	coding	720	2163	215	2377	10.0	0	True	ATTAAA	-15
PB.3211.7	chr13	-	2748	16	novel_not_in_catalog	RBM26	novel	3662	5	NA	NA	-2076	-54	any annotated donor/acceptor	FALSE	canonical	1	106254	junction_9	105706.5287726144	NA	1	NA	TRUE	NA	NA	NA	C	coding	702	2109	27	2135	85.0	NA	False	AATAAA	-17
PB.3211.4	chr13	-	3669	21	novel_in_catalog	RBM26	novel	3662	5	NA	NA	-75	-54	combination_of_known_junctions	FALSE	canonical	1	66811	junction_13	93832.69228691031	NA	2	1	TRUE	NA	NA	NA	C	coding	988	2967	90	3056	85.0	369	False	AATAAA	-17
PB.3211.5	chr13	-	3648	21	full-splice_match	RBM26	ENST00000438724.5	5152	21	364	1140	-69	-54	multi-exon	FALSE	canonical	1	222861	junction_19	72183.08079562343	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	84	3035	85.0	375	False	AATAAA	-17
PB.3211.2	chr13	-	4019	21	full-splice_match	RBM26	ENST00000267229.11	3624	21	-449	54	-16	-54	multi-exon	FALSE	canonical	1	106254	junction_9	85454.95729088805	NA	1	NA	TRUE	NA	NA	NA	C	coding	976	2931	476	3406	85.0	-5	True	AATAAA	-17
PB.3211.3	chr13	-	3678	21	novel_not_in_catalog	RBM26	novel	3662	5	NA	NA	-69	-54	any annotated donor/acceptor	FALSE	canonical	1	111884	junction_14	87754.28491669225	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2982	84	3065	85.0	375	False	AATAAA	-17
PB.4517.8	chr16	-	2441	6	full-splice_match	COG8	ENST00000648169.1	2495	6	53	1	13	-1	multi-exon	FALSE	canonical	1	110159	junction_1	67385.14645112824	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	19	1857	15.0	-7	True	TTTAAA	-24
PB.3211.1	chr13	-	3741	21	novel_in_catalog	RBM26	novel	3662	5	NA	NA	-75	27	combination_of_known_junctions	FALSE	canonical	1	66811	junction_13	103554.30351221527	NA	1	NA	TRUE	NA	NA	NA	C	coding	985	2958	90	3047	90.0	369	False	NA	NA
PB.4517.6	chr16	-	3870	6	full-splice_match	COG8	ENST00000306875.9	4247	6	104	273	20	-273	multi-exon	FALSE	canonical	1	110159	junction_1	67385.14645112824	NA	4	NA	TRUE	NA	NA	NA	C	coding	612	1839	12	1850	100.0	0	True	NA	NA
PB.4517.7	chr16	-	3028	7	novel_not_in_catalog	COG8	novel	936	2	NA	NA	3	-660	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	98279.67358795794	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	29	1867	40.0	-17	True	TATAAA	-14
PB.4517.4	chr16	-	2866	2	full-splice_match	PDF	ENST00000288022.1	1158	2	-1	-1707	-1	1707	multi-exon	FALSE	canonical	1	195533	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	27	758	30.0	-9	True	AATAAA	-17
PB.4517.5	chr16	-	2581	2	full-splice_match	PDF	ENST00000288022.1	1158	2	13	-1436	13	1436	multi-exon	FALSE	canonical	1	195533	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	13	744	100.0	5	True	NA	NA
PB.4517.2	chr16	-	3644	7	novel_not_in_catalog	COG8	novel	936	2	NA	NA	17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	98279.67358795794	NA	3	1	TRUE	NA	NA	NA	C	coding	612	1839	15	1853	15.0	-3	True	NA	NA
PB.4517.3	chr16	-	3497	7	novel_not_in_catalog	COG8	novel	936	2	NA	NA	17	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	98279.67358795794	NA	1	NA	TRUE	NA	NA	NA	C	coding	612	1839	15	1853	15.0	-3	True	NA	NA
PB.3211.8	chr13	-	3247	21	full-splice_match	RBM26	ENST00000438724.5	5152	21	368	1537	-65	-451	multi-exon	FALSE	canonical	1	222861	junction_19	72183.08079562343	NA	1	1	TRUE	NA	NA	NA	C	coding	979	2940	92	3031	50.0	379	False	AGTAAA	-18
PB.4517.1	chr16	-	3816	8	novel_not_in_catalog	COG8	novel	936	2	NA	NA	6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	108976.82175057751	NA	1	1	TRUE	NA	NA	NA	C	coding	612	1839	26	1864	15.0	-14	True	NA	NA
PB.7742.3	chr22	-	6981	39	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	63	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	1202351.2477111008	NA	9	NA	TRUE	NA	NA	NA	C	coding	1276	3831	218	4048	15.0	-1	True	AATAAA	-18
PB.7742.2	chr22	-	6979	38	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	63	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_16	1230747.1396806666	NA	3	1	TRUE	NA	NA	NA	C	coding	771	2316	3274	5589	15.0	-1	True	AATAAA	-18
PB.11044.7	chr8	+	2490	11	novel_not_in_catalog	PPP2R2A	novel	3940	10	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	257	junction_2	278466.5372671553	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	908	1774	15.0	-7	True	AATAAA	-16
PB.10788.1	chr7	-	4153	15	incomplete-splice_match	DOCK4	ENST00000445943.5	5999	53	238931	-2162	19226	-2	5prime_fragment	TRUE	canonical	1	80572	junction_6	19512.912917227557	NA	5	NA	TRUE	NA	NA	NA	A	coding	660	1983	9	1991	20.0	5021	False	AATAAA	-18
PB.187.4	chr1	+	1932	7	full-splice_match	MTFR1L	ENST00000374303.6	2004	7	72	0	0	0	multi-exon	FALSE	canonical	1	328859	junction_1	113046.34823933942	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	139	1017	10.0	0	True	ATTAAA	-24
PB.187.5	chr1	+	1819	7	full-splice_match	MTFR1L	ENST00000474295.5	1873	7	53	1	1	0	multi-exon	FALSE	canonical	1	68638	junction_5	197648.593697389	NA	2	NA	TRUE	NA	NA	NA	C	coding	205	618	135	752	10.0	4	True	ATTAAA	-24
PB.187.6	chr1	+	2311	6	novel_in_catalog	AL020996.2	novel	568	3	NA	NA	6031	9196	intron_retention	FALSE	canonical	1	68638	junction_4	216458.1170863315	NA	1	NA	TRUE	NA	NA	NA	B	coding	108	327	919	1245	10.0	26	True	ATTAAA	-23
PB.187.7	chr1	+	2015	7	full-splice_match	MTFR1L	ENST00000374300.7	2053	7	41	-3	41	0	multi-exon	FALSE	canonical	1	6755	junction_1	213058.32288425157	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	222	1100	10.0	27	False	ATTAAA	-24
PB.7441.2	chr21	-	4578	2	incomplete-splice_match	U2AF1L5	ENST00000624739.1	4715	7	16	6959	11	510	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7441.1	chr21	-	4739	7	full-splice_match	U2AF1	ENST00000475639.5	4694	7	-46	1	0	0	multi-exon	FALSE	canonical	1	635048	junction_1	935886.4188879973	NA	0	NA	TRUE	NA	NA	NA	C	coding	167	504	4091	4594	20.0	-17	True	AATAAA	-19
PB.187.3	chr1	+	2135	7	novel_in_catalog	AL020996.2	novel	568	3	NA	NA	5997	9197	intron_retention	FALSE	canonical	1	27955	junction_2	210708.15376961566	NA	8	NA	TRUE	NA	NA	NA	B	coding	195	588	633	1220	10.0	-8	True	ATTAAA	-24
PB.841.7	chr1	+	2909	13	novel_in_catalog	IFI16	novel	856	3	NA	NA	110	-1	combination_of_known_junctions	FALSE	canonical	1	32640	junction_1	349385.91628943733	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	301	2658	20.0	-9202	False	AATAAA	-25
PB.9231.4	chr5	-	2788	18	novel_in_catalog	SLC38A9	novel	3509	8	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	1	11280	junction_15	43592.27378592438	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	459	2144	15.0	0	True	AATAAA	-24
PB.7277.10	chr20	-	3720	17	novel_not_in_catalog	SAMHD1	novel	5298	16	NA	NA	0	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178152.95622353168	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	72	1952	75.0	-7	True	NA	NA
PB.7277.12	chr20	-	4006	16	full-splice_match	SAMHD1	ENST00000646673.1	5298	16	193	1099	0	32	multi-exon	FALSE	canonical	1	387153	junction_9	121378.43881634553	NA	1	NA	TRUE	NA	NA	NA	C	coding	626	1881	66	1946	25.0	-1	True	AAAACA	-22
PB.7277.13	chr20	-	2209	16	full-splice_match	SAMHD1	ENST00000645033.1	4680	16	31	2440	-2	25	multi-exon	FALSE	canonical	1	21198	junction_9	176533.60775867393	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	1171	1968	35.0	-3	True	ATTAAA	-17
PB.7277.14	chr20	-	2341	16	full-splice_match	SAMHD1	ENST00000646673.1	5298	16	35	2922	-23	21	multi-exon	FALSE	canonical	1	387153	junction_9	121378.43881634553	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1881	224	2104	25.0	-24	False	ATTAAA	-13
PB.7277.15	chr20	-	1786	13	incomplete-splice_match	SAMHD1	ENST00000643918.1	2967	16	1	11164	1	42	3prime_fragment	FALSE	canonical	1	387153	junction_6	116629.50135683105	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	38	1552	40.0	0	True	ATTAAA	-16
PB.6761.7	chr2	+	2750	11	full-splice_match	SPOPL	ENST00000280098.8	6025	11	115	3160	-16	1257	multi-exon	FALSE	canonical	1	76007	junction_4	30810.40019928336	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	265	1443	15.0	9	True	TATAAA	-6
PB.9732.1	chr6	+	1352	10	novel_not_in_catalog	PAK1IP1	novel	1800	10	NA	NA	228	-223	any annotated donor/acceptor	FALSE	canonical	1	36298	junction_1	186070.8245453533	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	64	1245	70.0	-49	True	AGTAAA	-23
PB.6761.9	chr2	+	4848	6	incomplete-splice_match	SPOPL	ENST00000420679.1	1386	11	8863	-4097	-5368	-320	5prime_fragment	FALSE	canonical	1	118385	junction_5	16370.71529775043	NA	5	NA	TRUE	NA	NA	NA	C	coding	165	498	204	701	30.0	4931	False	AATAAA	-18
PB.6761.8	chr2	+	4570	11	novel_in_catalog	SPOPL	novel	6025	11	NA	NA	-1	-1254	intron_retention	FALSE	canonical	1	34877	junction_3	41233.98515108623	NA	5	NA	TRUE	NA	NA	NA	C	coding	276	831	527	1357	55.0	24	True	AATAAA	-17
PB.9732.2	chr6	+	2973	10	full-splice_match	PAK1IP1	ENST00000379568.3	1800	10	213	-1386	213	1386	multi-exon	FALSE	canonical	1	138937	junction_1	159353.78298693418	NA	4	NA	TRUE	NA	NA	NA	C	coding	392	1179	79	1257	25.0	-64	False	NA	NA
PB.8479.7	chr3	-	1977	3	full-splice_match	DHX36	ENST00000491011.1	833	3	-230	-914	16	914	multi-exon	FALSE	canonical	1	403367	junction_2	47757.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	66	758	20.0	-20	True	AATAAA	-16
PB.6620.3	chr2	-	4380	11	novel_in_catalog	MRPS5	novel	1652	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	410612	junction_2	99405.47383544833	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	22	900	25.0	-12	True	TTTAAA	-31
PB.6620.2	chr2	-	1656	12	full-splice_match	MRPS5	ENST00000272418.6	1652	12	-4	0	-4	0	multi-exon	FALSE	canonical	1	410612	junction_2	94791.11857880719	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	214	1506	25.0	-2	True	TTTAAA	-31
PB.6620.5	chr2	-	4240	10	novel_in_catalog	MRPS5	novel	1652	12	NA	NA	3	0	intron_retention	FALSE	canonical	1	15463	junction_1	194003.1487116245	NA	25	1	TRUE	NA	NA	NA	C	coding	292	879	20	898	25.0	-10	True	TTTAAA	-30
PB.6620.4	chr2	-	1370	11	full-splice_match	MRPS5	ENST00000345084.9	1359	11	-11	0	3	0	multi-exon	FALSE	canonical	1	38696	junction_5	183761.3596718581	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	841	1221	25.0	-10	True	TTTAAA	-30
PB.7001.6	chr2	+	1620	12	novel_in_catalog	ARPC2	novel	1505	11	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	8711	junction_5	2636263.128372551	NA	2	1	TRUE	NA	NA	NA	C	coding	186	561	630	1190	25.0	-17	True	AATAAA	-16
PB.10543.3	chr7	+	1514	1	antisense	novelGene_FIGNL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.9231.1	chr5	-	2524	16	full-splice_match	SLC38A9	ENST00000396865.6	2927	16	400	3	3	-1	multi-exon	FALSE	canonical	1	68776	junction_14	28569.026966201625	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	193	1878	20.0	-3	True	AATAAA	-26
PB.11708.8	chr9	-	4835	37	novel_not_in_catalog	ELP1	novel	2840	12	NA	NA	-6	6	any annotated donor/acceptor	FALSE	canonical	1	7609	junction_6	114368.98168107223	NA	0	NA	TRUE	NA	NA	NA	C	coding	1346	4041	315	4355	20.0	-36	True	AATAAA	-19
PB.12111.4	chrX	-	2741	1	full-splice_match	ZXDA	ENST00000358697.5	4113	1	310	1062	310	-1062	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	799	2400	91	2490	20.0	-689	False	NA	NA
PB.1109.19	chr1	+	2468	12	novel_not_in_catalog	DTL	novel	4471	14	NA	NA	-73	-26327	any annotated donor/acceptor	FALSE	canonical	1	982	junction_11	87486.3647400067	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	119	1342	50.0	-20	True	AAAAAG	-17
PB.11840.4	chr9	-	2905	16	novel_in_catalog	CRAT	novel	2763	14	NA	NA	5	12	combination_of_known_junctions	FALSE	canonical	1	10844	junction_14	177368.1094110839	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	489	2306	25.0	17	True	AATAAA	-16
PB.11046.1	chr8	+	1238	6	full-splice_match	BNIP3L	ENST00000380629.6	3610	6	156	2216	0	59	multi-exon	FALSE	canonical	1	972232	junction_1	503860.3180632505	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	78	737	85.0	-14	True	NA	NA
PB.8479.6	chr3	-	1343	10	incomplete-splice_match	DHX36	ENST00000329463.9	2985	25	-55	24886	-11	2287	3prime_fragment	FALSE	canonical	1	245994	junction_7	87364.90685497111	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1287	56	1342	80.0	-10	True	AATAGA	-2
PB.10615.5	chr7	+	1078	8	novel_in_catalog	STAG3L1	novel	1192	8	NA	NA	37	-479	intron_retention	FALSE	canonical	1	1457	junction_4	3355.855084317375	NA	0	NA	TRUE	NA	NA	NA	B	coding	134	405	339	743	100.0	0	True	NA	NA
PB.1568.6	chr10	-	4200	4	novel_not_in_catalog	ARHGAP19-SLIT1	novel	1876	15	NA	NA	62294	-69134	any annotated donor/acceptor	FALSE	canonical	1	525	junction_3	58513.77674246183	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ATTAAA	-16
PB.1568.5	chr10	-	5353	11	full-splice_match	ARHGAP19	ENST00000358308.7	5390	11	37	0	-1	0	multi-exon	FALSE	canonical	1	6667	junction_6	47155.16150327554	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	10	1407	25.0	0	True	ATTAAA	-20
PB.1568.4	chr10	-	5451	12	full-splice_match	ARHGAP19	ENST00000358531.8	5463	12	9	3	9	0	multi-exon	FALSE	canonical	1	85402	junction_1	27819.015667241263	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	21	1505	25.0	-11	True	ATTAAA	-20
PB.1568.3	chr10	-	5434	12	novel_not_in_catalog	ARHGAP19-SLIT1	novel	1876	15	NA	NA	-10	-69128	any annotated donor/acceptor	FALSE	canonical	1	7500	junction_2	45507.745300812654	NA	0	NA	TRUE	NA	NA	NA	B	coding	468	1407	21	1427	20.0	-11	True	ATTAAA	-22
PB.1568.2	chr10	-	5475	12	novel_not_in_catalog	ARHGAP19-SLIT1	novel	1876	15	NA	NA	-11	-69128	any annotated donor/acceptor	FALSE	canonical	1	3194	junction_11	46582.42102583441	NA	3	NA	TRUE	NA	NA	NA	B	coding	501	1506	22	1527	20.0	-12	True	ATTAAA	-22
PB.1568.1	chr10	-	5494	12	full-splice_match	ARHGAP19	ENST00000371027.5	2301	12	-58	-3135	-58	-1	multi-exon	FALSE	canonical	1	2767	junction_11	46681.10022746123	NA	2	NA	TRUE	NA	NA	NA	C	coding	485	1458	89	1546	20.0	-69	False	ATTAAA	-22
PB.1568.9	chr10	-	4174	12	full-splice_match	ARHGAP19	ENST00000358531.8	5463	12	1	1288	1	-1281	multi-exon	FALSE	canonical	1	85402	junction_1	27819.015667241263	NA	1	1	TRUE	NA	NA	NA	C	coding	494	1485	29	1513	25.0	-19	True	ATTAAA	-29
PB.1568.8	chr10	-	5321	12	novel_not_in_catalog	ARHGAP19-SLIT1	novel	1876	15	NA	NA	-24	-69134	any annotated donor/acceptor	FALSE	canonical	1	6354	junction_9	46140.74520313718	NA	1	NA	TRUE	NA	NA	NA	B	coding	288	867	513	1379	25.0	-25	False	ATTAAA	-16
PB.6367.3	chr2	+	1821	7	full-splice_match	MAPRE3	ENST00000405074.7	1801	7	-19	-1	2	1	multi-exon	FALSE	canonical	1	131879	junction_4	237258.92270892573	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	172	972	20.0	2	True	AATAAA	-19
PB.7455.1	chr21	-	2828	4	full-splice_match	AP003900.1	ENST00000622592.1	859	4	-50	-1919	18	1919	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	103	312	178	489	70.0	NA	False	NA	NA
PB.7455.2	chr21	-	1629	4	full-splice_match	AP003900.1	ENST00000622592.1	859	4	-65	-705	3	705	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	193	504	85.0	NA	False	NA	NA
PB.7455.3	chr21	-	1442	2	full-splice_match	AP003900.1	ENST00000616952.1	225	2	13	-1230	13	705	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	84	255	63	317	85.0	NA	False	NA	NA
PB.7455.4	chr21	-	3697	2	novel_in_catalog	AP003900.1	novel	859	4	NA	NA	1	-7967	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	NA	False	NA	NA
PB.12111.2	chrX	-	5085	1	full-splice_match	ZXDA	ENST00000358697.5	4113	1	312	-1284	312	1284	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	799	2400	89	2488	20.0	-687	False	AATAAA	-23
PB.11140.6	chr8	+	1630	5	full-splice_match	CHCHD7	ENST00000523975.5	1805	5	-8	183	1	0	multi-exon	FALSE	canonical	1	114555	junction_2	301894.56345138117	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	AATAAA	-16
PB.6982.5	chr2	-	4485	10	full-splice_match	LANCL1	ENST00000431941.6	1270	10	20	-3235	2	-3	multi-exon	FALSE	canonical	1	34456	junction_9	157186.7963454098	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	51	1250	20.0	-27	True	AATAAA	-17
PB.4153.2	chr16	+	5760	31	novel_not_in_catalog	MAPK8IP3	novel	5661	32	NA	NA	2	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_8	175301.4692605633	NA	4	2	TRUE	NA	NA	NA	A	coding	921	2766	1504	4269	5.0	0	True	AATAAA	-14
PB.1067.9	chr1	-	1718	7	full-splice_match	NUCKS1	ENST00000367142.4	6496	7	85	4693	85	940	multi-exon	FALSE	canonical	1	1131827	junction_1	952223.6762744699	NA	3	NA	TRUE	NA	NA	NA	C	coding	243	732	219	950	80.0	-10	True	NA	NA
PB.4153.1	chr16	+	4116	1	full-splice_match	AL031710.2	ENST00000621884.1	722	1	-1067	-2327	-1067	2327	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	243	732	159	890	90.0	-10	True	NA	NA
PB.322.8	chr1	+	3173	11	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	-7	-6	any annotated donor/acceptor	FALSE	canonical	1	10906	junction_6	215871.0323934177	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	44	991	15.0	-7	True	ATTAAA	-18
PB.1067.8	chr1	-	1969	7	full-splice_match	NUCKS1	ENST00000367142.4	6496	7	57	4470	57	1163	multi-exon	FALSE	canonical	1	1131827	junction_1	952223.6762744699	NA	1	NA	TRUE	NA	NA	NA	C	coding	243	732	247	978	40.0	24	False	AATAAA	-22
PB.6775.2	chr2	-	1344	8	full-splice_match	MMADHC	ENST00000303319.9	1436	8	91	1	1	-1	multi-exon	FALSE	canonical	1	478946	junction_4	250252.3012007796	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	115	1005	20.0	49	True	AATAAA	-21
PB.6775.1	chr2	-	3249	8	full-splice_match	MMADHC	ENST00000303319.9	1436	8	46	-1859	8	1859	multi-exon	FALSE	canonical	1	478946	junction_4	250252.3012007796	NA	2	NA	TRUE	NA	NA	NA	C	coding	296	891	160	1050	35.0	4	True	AATAAA	-19
PB.10609.2	chr7	-	1580	7	novel_in_catalog	GTF2IRD2	novel	3558	16	NA	NA	-8	-6	no_combination_of_known_junctions	FALSE	canonical	1	74	junction_2	1648.8984875431909	NA	0	NA	TRUE	NA	NA	NA	B	coding	197	594	199	792	25.0	NA	False	AATAAA	-29
PB.10609.3	chr7	-	1570	8	incomplete-splice_match	GTF2IRD2	ENST00000625377.2	1910	17	-15	19818	-4	-41	3prime_fragment	FALSE	canonical	1	330	junction_3	1553.648030952195	NA	1	NA	TRUE	NA	NA	NA	B	coding	256	771	195	965	75.0	NA	False	NA	NA
PB.10609.1	chr7	-	3559	16	novel_not_in_catalog	GTF2IRD2	novel	3558	16	NA	NA	-2	-1	any annotated donor/acceptor	TRUE	canonical	1	49	junction_1	1848.724143835418	NA	0	NA	TRUE	NA	NA	NA	B	coding	954	2865	178	3042	20.0	NA	False	NA	NA
PB.3623.5	chr14	-	1880	11	full-splice_match	ATXN3	ENST00000558190.6	6927	11	14	5033	-1	296	multi-exon	FALSE	canonical	1	144590	junction_10	73039.93296279783	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	60	1145	25.0	-48	False	AATAAA	-14
PB.8677.3	chr4	+	2653	6	novel_in_catalog	ZBTB49	novel	2380	6	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	1	6268	junction_5	11367.237317835852	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	135	1535	25.0	-13	True	AATAAA	-17
PB.8677.2	chr4	+	2909	8	full-splice_match	ZBTB49	ENST00000337872.8	2889	8	-22	2	-22	-2	multi-exon	FALSE	canonical	1	23466	junction_3	5328.364553624923	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	144	2441	20.0	-22	True	AATAAA	-19
PB.8677.1	chr4	+	2877	8	novel_in_catalog	ZBTB49	novel	2380	6	NA	NA	-28	-1	combination_of_known_junctions	TRUE	canonical	1	1797	junction_1	11118.006872471635	NA	0	NA	TRUE	NA	NA	NA	C	coding	765	2298	111	2408	20.0	-28	True	AATAAA	-20
PB.8677.4	chr4	+	2841	7	novel_in_catalog	ZBTB49	novel	2380	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	19980	junction_3	6049.022770020148	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	122	1384	20.0	0	True	AATAAA	-20
PB.5180.1	chr17	-	1261	6	full-splice_match	CD79B	ENST00000392795.7	1254	6	-6	-1	-6	1	multi-exon	TRUE	canonical	1	267660	junction_5	254477.08720401526	NA	0	NA	TRUE	NA	NA	NA	A	coding	230	693	82	774	20.0	4	True	AATAAA	-22
PB.5915.9	chr19	+	3178	18	novel_not_in_catalog	UBA2	novel	754	7	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	289674.1974277393	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	53	1975	20.0	-11	True	ACTAAA	-18
PB.5915.8	chr19	+	2847	17	full-splice_match	UBA2	ENST00000246548.8	4023	17	17	1159	7	202	multi-exon	FALSE	canonical	1	250667	junction_9	255848.2917784162	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	54	1976	90.0	-12	True	NA	NA
PB.5915.7	chr19	+	2503	17	full-splice_match	UBA2	ENST00000246548.8	4023	17	9	1511	-1	-150	multi-exon	FALSE	canonical	1	250667	junction_9	255848.2917784162	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	62	1984	20.0	-20	True	AAAACA	-15
PB.5915.6	chr19	+	2497	16	novel_in_catalog	UBA2	novel	754	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	21229	junction_12	296297.38359579816	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	62	1828	25.0	-20	True	AATAAA	-20
PB.5915.5	chr19	+	2762	18	novel_not_in_catalog	UBA2	novel	754	7	NA	NA	-2	2	any annotated donor/acceptor	FALSE	canonical	1	578	junction_1	320535.05579304293	NA	1	1	TRUE	NA	NA	NA	C	coding	544	1635	457	2091	20.0	-21	True	AATAAA	-22
PB.5915.4	chr19	+	2755	18	novel_in_catalog	UBA2	novel	754	7	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	1	46636	junction_1	304990.74139044975	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	445	2079	10.0	-21	True	AATAAA	-27
PB.5915.3	chr19	+	2215	12	novel_in_catalog	UBA2	novel	754	7	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	799	junction_1	290445.48675260675	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	428	1546	25.0	-25	True	AATAAA	-20
PB.5915.2	chr19	+	2612	17	novel_not_in_catalog	UBA2	novel	754	7	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	681	junction_11	297269.5171157751	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	67	1944	25.0	-25	True	AATAAA	-19
PB.5915.1	chr19	+	2673	17	novel_not_in_catalog	UBA2	novel	754	7	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	290280.4011572259	NA	44	6	TRUE	NA	NA	NA	C	coding	645	1938	67	2004	25.0	-25	True	AATAAA	-20
PB.11044.4	chr8	+	3663	10	full-splice_match	PPP2R2A	ENST00000380737.7	3940	10	272	5	-72	-5	multi-exon	FALSE	canonical	1	357623	junction_1	142144.80595331712	NA	2	NA	TRUE	NA	NA	NA	C	coding	447	1344	58	1401	35.0	0	True	AATAAA	-14
PB.5505.3	chr18	+	4434	30	novel_not_in_catalog	RELCH	novel	8585	29	NA	NA	0	-1149	any annotated donor/acceptor	FALSE	canonical	1	8231	junction_12	65645.25658443017	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	242	2299	45.0	-7	True	AATAAA	-30
PB.7811.5	chr22	+	3306	18	novel_in_catalog	L3MBTL2	novel	3296	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	5902	junction_1	99758.53535956962	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	177	2288	15.0	0	True	ATTAAA	-15
PB.8272.2	chr3	+	2558	1	full-splice_match	ZBTB11-AS1	ENST00000609682.1	2743	1	-64	249	-64	-249	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-39	False	AATAAA	-18
PB.6507.1	chr2	-	5439	2	full-splice_match	SERTAD2	ENST00000313349.3	5549	2	109	1	109	-1	multi-exon	FALSE	canonical	1	136758	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	314	945	190	1134	25.0	2	True	AATAAA	-14
PB.6096.2	chr19	-	3201	19	novel_in_catalog	PRKD2	novel	2906	19	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	24911	junction_18	127605.5955483415	NA	0	NA	TRUE	NA	NA	NA	C	coding	878	2637	357	2993	30.0	-28	True	ATTAAA	-40
PB.6096.3	chr19	-	3308	19	full-splice_match	PRKD2	ENST00000433867.5	3321	19	13	0	0	0	multi-exon	FALSE	canonical	1	48783	junction_18	124213.73388863067	NA	1	NA	TRUE	NA	NA	NA	C	coding	878	2637	466	3102	30.0	-1	True	ATTAAA	-38
PB.6377.8	chr2	+	2069	15	novel_in_catalog	SNX17	novel	2400	14	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	8483	junction_2	438529.3783961227	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	495	1661	10.0	1	True	ATTAAA	-20
PB.10091.22	chr6	-	2894	28	novel_in_catalog	SNX14	novel	3348	26	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	1	4376	junction_22	169638.55170266508	NA	5	NA	TRUE	NA	NA	NA	C	coding	596	1791	944	2734	35.0	-1	True	AATAAA	-22
PB.10091.23	chr6	-	2863	26	novel_in_catalog	SNX14	novel	3348	26	NA	NA	43	-1	combination_of_known_junctions	FALSE	canonical	1	39174	junction_24	161995.56037015826	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	46	2703	35.0	-1	True	AATAAA	-22
PB.6377.6	chr2	+	2022	16	full-splice_match	SNX17	ENST00000427123.5	2007	16	-11	-4	0	0	multi-exon	FALSE	canonical	1	22077	junction_3	522629.54596354597	NA	3	NA	TRUE	NA	NA	NA	C	coding	256	771	844	1614	10.0	-3	True	ATTAAA	-20
PB.10091.21	chr6	-	2966	26	novel_in_catalog	SNX14	novel	3348	26	NA	NA	-7	-1	no_combination_of_known_junctions	FALSE	canonical	1	5714	junction_12	153522.43764481595	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	206	2806	35.0	8163	False	AATAAA	-22
PB.10091.26	chr6	-	3743	25	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	3	972	any annotated donor/acceptor	FALSE	canonical	1	3474	junction_13	134917.57052710926	NA	4	2	TRUE	NA	NA	NA	C	coding	496	1491	1358	2848	60.0	-38	True	NA	NA
PB.6377.1	chr2	+	2192	15	full-splice_match	SNX17	ENST00000233575.6	2044	15	90	-238	-3	-167	multi-exon	FALSE	canonical	1	804876	junction_1	281542.6302421959	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	133	1545	20.0	-8	True	AATACA	-16
PB.10091.24	chr6	-	3174	29	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	1940	junction_28	165059.62474945956	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	161	3016	35.0	-3	True	AATAAA	-20
PB.10091.25	chr6	-	5559	25	incomplete-splice_match	SNX14	ENST00000369627.6	3111	28	-47	5244	-2	2811	3prime_fragment	FALSE	canonical	1	232947	junction_23	108562.39877280511	NA	3	NA	TRUE	NA	NA	NA	C	coding	874	2625	201	2825	35.0	-43	True	NA	NA
PB.2737.1	chr12	-	1799	7	full-splice_match	TMBIM4	ENST00000358230.7	2952	7	60	1093	0	-2	multi-exon	FALSE	canonical	1	826935	junction_6	174242.84589107876	NA	3	NA	TRUE	NA	NA	NA	C	coding	238	717	62	778	15.0	12	True	ATTAAA	-13
PB.2737.2	chr12	-	3143	1	novel_in_catalog	TMBIM4	novel	2952	7	NA	NA	2	1901	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	99	300	37	336	10.0	-2	True	NA	NA
PB.3033.8	chr12	+	2423	4	full-splice_match	ZNF140	ENST00000412146.6	553	4	19	-1889	12	4	multi-exon	FALSE	canonical	1	9148	junction_1	40878.4060871045	NA	26	NA	TRUE	NA	NA	NA	C	coding	423	1272	273	1544	40.0	-38	True	AATAAA	-29
PB.3033.9	chr12	+	2315	4	full-splice_match	ZNF140	ENST00000412146.6	553	4	22	-1784	15	-3	multi-exon	FALSE	canonical	1	9148	junction_1	40878.4060871045	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	270	1541	20.0	-35	True	AATAAA	-17
PB.3033.4	chr12	+	2390	6	novel_in_catalog	ZNF140	novel	3550	5	NA	NA	-49	-3	no_combination_of_known_junctions	FALSE	canonical	1	15656	junction_1	33434.34386734694	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	552	1616	20.0	-28	True	AATAAA	-17
PB.12021.1	chrX	+	2948	13	full-splice_match	CYBB	ENST00000378588.4	4324	13	-8	1384	-8	-1384	multi-exon	FALSE	canonical	1	231613	junction_5	113263.65592829438	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	76	1788	20.0	-7842	False	AATACA	-18
PB.12021.2	chrX	+	1815	13	full-splice_match	CYBB	ENST00000378588.4	4324	13	6	2503	6	-2503	multi-exon	FALSE	canonical	1	231613	junction_5	113263.65592829438	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	62	1774	50.0	-7828	False	AATAAA	-17
PB.12021.3	chrX	+	4284	13	full-splice_match	CYBB	ENST00000378588.4	4324	13	40	0	40	0	multi-exon	FALSE	canonical	1	231613	junction_5	113263.65592829438	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	28	1740	10.0	-8	True	ATTAAA	-15
PB.3033.1	chr12	+	2347	5	full-splice_match	ZNF140	ENST00000355557.6	3550	5	1085	118	7	-2	multi-exon	FALSE	canonical	1	62493	junction_4	17908.924470428145	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	199	1572	15.0	-9	True	AATAAA	-18
PB.3033.3	chr12	+	3057	4	novel_in_catalog	ZNF140	novel	3550	5	NA	NA	-58	-2	intron_retention	FALSE	canonical	1	11412	junction_2	34785.35477595261	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	906	2282	15.0	-37	True	AATAAA	-18
PB.12116.6	chrX	-	2436	14	novel_not_in_catalog	LAS1L	novel	2386	13	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	1727	junction_5	167211.6514235032	NA	0	NA	TRUE	NA	NA	NA	C	coding	727	2184	62	2245	15.0	10	True	AATAAA	-11
PB.12116.5	chrX	-	2397	13	full-splice_match	LAS1L	ENST00000374807.9	2386	13	-13	2	8	-1	multi-exon	FALSE	canonical	1	381444	junction_3	73023.60999571	NA	0	NA	TRUE	NA	NA	NA	C	coding	717	2154	53	2206	15.0	19	True	AATAAA	-11
PB.12116.4	chrX	-	3117	12	novel_in_catalog	LAS1L	novel	2386	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	153044	junction_4	113409.35414922993	NA	3	1	TRUE	NA	NA	NA	C	coding	270	813	2114	2926	15.0	-1	True	AATAAA	-11
PB.12116.3	chrX	-	2322	12	novel_not_in_catalog	LAS1L	novel	2386	13	NA	NA	-12	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	159569.67762637464	NA	3	1	TRUE	NA	NA	NA	C	coding	685	2058	73	2130	15.0	-1	True	AATAAA	-12
PB.12116.2	chrX	-	2438	14	full-splice_match	LAS1L	ENST00000374811.7	2439	14	0	1	0	0	multi-exon	FALSE	canonical	1	147030	junction_5	140714.06630229062	NA	0	NA	TRUE	NA	NA	NA	C	coding	734	2205	42	2246	15.0	30	True	AATAAA	-12
PB.12116.1	chrX	-	3212	12	novel_in_catalog	LAS1L	novel	2386	13	NA	NA	15	0	intron_retention	FALSE	canonical	1	381444	junction_3	76218.49385139547	NA	3	1	TRUE	NA	NA	NA	C	coding	333	1002	2019	3020	15.0	47	True	AATAAA	-12
PB.10247.1	chr6	+	2943	7	incomplete-splice_match	VTA1	ENST00000367630.8	7028	8	18998	3915	-4118	-172	5prime_fragment	FALSE	canonical	1	451778	junction_1	109153.37155389812	NA	6	1	TRUE	NA	NA	NA	C	coding	265	798	15	812	40.0	NA	False	AATAAA	-22
PB.11653.1	chr9	-	2313	1	antisense	novelGene_SUSD3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	NA	False	NA	NA
PB.12116.9	chrX	-	1896	12	novel_in_catalog	LAS1L	novel	2386	13	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	8835	junction_1	194170.1875281766	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	63	1673	20.0	9	True	AATAAA	-17
PB.12116.8	chrX	-	2382	12	novel_not_in_catalog	LAS1L	novel	2386	13	NA	NA	-17	-2	any annotated donor/acceptor	FALSE	canonical	1	6100	junction_1	194674.09606746846	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	78	1547	20.0	-6	True	AATAAA	-18
PB.7139.1	chr20	-	1529	12	full-splice_match	IDH3B	ENST00000380843.8	1545	12	14	2	4	-2	multi-exon	FALSE	canonical	1	858375	junction_10	200421.61107315007	NA	0	NA	TRUE	NA	NA	NA	A	coding	385	1158	18	1175	20.0	10	True	AATAAA	-12
PB.11085.1	chr8	+	4420	12	full-splice_match	ERLIN2	ENST00000519638.2	4766	12	-67	413	-34	-413	multi-exon	FALSE	canonical	1	240359	junction_1	78611.50990590341	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	128	1147	20.0	-1245	False	TATAAA	-14
PB.3023.3	chr12	+	2585	8	novel_in_catalog	EP400	novel	12317	53	NA	NA	-9	-15	combination_of_known_junctions	FALSE	canonical	1	38991	junction_3	60057.084074662	NA	0	NA	TRUE	NA	NA	NA	B	coding	822	2466	119	2584	65.0	-10	True	AATAAA	-12
PB.2727.6	chr12	+	3129	22	novel_not_in_catalog	TBK1	novel	3256	21	NA	NA	-72	3	any annotated donor/acceptor	FALSE	canonical	1	16366	junction_16	109021.87232884127	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	102	1829	25.0	-20	True	AATAAA	-18
PB.3023.1	chr12	+	6399	32	novel_in_catalog	EP400	novel	12317	53	NA	NA	11	-7554	combination_of_known_junctions	FALSE	canonical	1	38991	junction_3	51780.80361755616	NA	1	NA	TRUE	NA	NA	NA	B	coding	2086	6258	142	6399	5.0	-33	True	NA	NA
PB.2727.4	chr12	+	2334	19	incomplete-splice_match	TBK1	ENST00000331710.9	3256	21	235	4190	-75	-3	3prime_fragment	FALSE	canonical	1	120569	junction_1	85025.94679338249	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	105	2174	30.0	-23	True	AATAAA	-18
PB.2727.3	chr12	+	3236	20	novel_in_catalog	TBK1	novel	3256	21	NA	NA	-75	2	intron_retention	FALSE	canonical	1	120569	junction_1	82783.87868563678	NA	3	1	TRUE	NA	NA	NA	C	coding	689	2070	105	2174	25.0	-23	True	AATAAA	-17
PB.2727.2	chr12	+	2957	21	novel_in_catalog	TBK1	novel	3256	21	NA	NA	-85	3	no_combination_of_known_junctions	FALSE	canonical	1	2331	junction_1	96100.15403342235	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	194	2227	25.0	-33	True	AATAAA	-18
PB.2727.1	chr12	+	2430	21	full-splice_match	TBK1	ENST00000331710.9	3256	21	246	580	-64	-580	multi-exon	FALSE	canonical	1	120569	junction_1	81566.3139466747	NA	1	NA	TRUE	NA	NA	NA	C	coding	729	2190	94	2283	55.0	-12	True	AATACA	-2
PB.6175.1	chr19	-	4637	5	full-splice_match	ZNF614	ENST00000270649.10	4818	5	181	0	-40	0	multi-exon	FALSE	canonical	1	44882	junction_3	10098.400046542027	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	365	2122	20.0	-12	True	NA	NA
PB.6175.3	chr19	-	4781	6	full-splice_match	ZNF614	ENST00000595189.5	1031	6	-74	-3676	-62	0	multi-exon	FALSE	canonical	1	18759	junction_2	21405.040914700443	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	1370	2266	20.0	-34	True	NA	NA
PB.6175.4	chr19	-	2441	5	full-splice_match	ZNF614	ENST00000270649.10	4818	5	146	2231	-75	1445	multi-exon	FALSE	canonical	1	44882	junction_3	10098.400046542027	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	400	2157	30.0	-47	True	AATAAA	-28
PB.6175.5	chr19	-	2751	5	novel_in_catalog	ZNF614	novel	1293	6	NA	NA	-60	1432	intron_retention	FALSE	canonical	1	18759	junction_1	19929.2202619671	NA	14	NA	TRUE	NA	NA	NA	C	coding	533	1602	879	2480	35.0	-32	True	AATAAA	-15
PB.2727.9	chr12	+	2774	20	novel_not_in_catalog	TBK1	novel	3256	21	NA	NA	-56	-74	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	101720.77108451205	NA	10	1	TRUE	NA	NA	NA	C	coding	307	924	86	1009	30.0	-4	True	ATTAAA	-16
PB.2727.8	chr12	+	2645	21	novel_not_in_catalog	TBK1	novel	3256	21	NA	NA	-66	1557	any annotated donor/acceptor	FALSE	canonical	1	3221	junction_20	101856.97376547175	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	96	2291	20.0	-14	True	NA	NA
PB.6746.2	chr2	+	3127	6	novel_in_catalog	CCDC74A	novel	1080	2	NA	NA	9	0	intron_retention	FALSE	canonical	1	70377	junction_2	39921.02526438919	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	738	1625	10.0	9742	False	AATAAA	-15
PB.659.1	chr1	+	2682	3	novel_not_in_catalog	LINC00623	novel	767	3	NA	NA	-172	-22973	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	40	123	261	383	55.0	NA	False	AATAAA	-21
PB.6746.3	chr2	+	4086	5	novel_in_catalog	CCDC74A	novel	1080	2	NA	NA	-11	0	intron_retention	FALSE	canonical	1	18871	junction_1	60661.67414850995	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	861	1760	10.0	9745	False	AATAAA	-15
PB.11051.1	chr8	+	2690	17	incomplete-splice_match	EPHX2	ENST00000521400.5	3140	19	364	641	-8	4	intron_retention	FALSE	canonical	1	126333	junction_1	39965.53631445903	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	67	1728	5.0	-54	True	AATAAA	-20
PB.1648.10	chr10	+	1395	13	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	5	20271	5	2359	3prime_fragment	FALSE	canonical	1	324823	junction_2	185975.6185485636	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1272	122	1393	60.0	1	True	AAGAAA	-45
PB.1648.11	chr10	+	2291	20	incomplete-splice_match	SMC3	ENST00000361804.4	4114	29	5	6444	5	-6444	3prime_fragment	FALSE	non_canonical	0	0	junction_19	204420.98719710048	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2169	122	2290	55.0	1	True	AATGAA	-41
PB.7712.8	chr22	+	3212	6	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-1	1	intron_retention	FALSE	non_canonical	0	0	junction_3	29736.55663051793	NA	3	1	TRUE	NA	NA	NA	B	coding	112	339	327	665	15.0	-45	True	ATTAAA	-19
PB.7562.10	chr21	-	2864	16	full-splice_match	ITGB2	ENST00000523323.5	2823	16	-42	1	10	-1	multi-exon	FALSE	canonical	1	5308	junction_14	335625.93656748283	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2103	351	2453	20.0	-19	True	AATAAA	-23
PB.5618.1	chr19	+	1742	11	full-splice_match	PIAS4	ENST00000262971.2	3159	11	81	1336	-27	-1336	multi-exon	FALSE	canonical	1	168763	junction_10	42047.32095639388	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	35	1567	75.0	-24	True	NA	NA
PB.5618.2	chr19	+	3082	11	full-splice_match	PIAS4	ENST00000262971.2	3159	11	77	0	-31	0	multi-exon	FALSE	canonical	1	168763	junction_10	42047.32095639388	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	39	1571	5.0	-28	True	AATAAA	-20
PB.4250.1	chr16	+	3205	2	full-splice_match	SNN	ENST00000329565.5	3312	2	29	78	29	-78	multi-exon	FALSE	canonical	1	268324	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	88	267	184	450	35.0	-12	True	AATAAA	-22
PB.11646.54	chr9	-	4607	19	novel_in_catalog	IARS	novel	4656	34	NA	NA	-2	0	intron_retention	FALSE	canonical	1	444149	junction_18	256204.58379572633	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	95	2203	80.0	-3	True	NA	NA
PB.3477.1	chr14	+	3897	3	novel_not_in_catalog	PPM1A	novel	1713	6	NA	NA	-849	-2	any annotated donor/acceptor	FALSE	canonical	1	835	junction_1	372815.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	134	1108	20.0	-1157	False	AATAAA	-17
PB.3477.2	chr14	+	8251	6	full-splice_match	PPM1A	ENST00000395076.8	8184	6	-69	2	-69	-2	multi-exon	FALSE	canonical	1	146045	junction_1	206174.74648520854	NA	3	NA	TRUE	NA	NA	NA	C	coding	382	1149	500	1648	25.0	-1	True	AATAAA	-14
PB.3477.3	chr14	+	2229	3	incomplete-splice_match	PPM1A	ENST00000395076.8	8184	6	-69	12568	-69	-2036	3prime_fragment	FALSE	canonical	1	146045	junction_1	300210.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	500	1474	85.0	-1	True	AAAACA	-26
PB.3477.4	chr14	+	2606	7	novel_in_catalog	PPM1A	novel	1713	6	NA	NA	-68	-1	combination_of_known_junctions	FALSE	canonical	1	7586	junction_1	279885.2916831386	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	586	1734	35.0	0	True	AATAAA	-22
PB.3477.5	chr14	+	2652	7	novel_in_catalog	PPM1A	novel	1713	6	NA	NA	-67	-10	no_combination_of_known_junctions	FALSE	canonical	1	1903	junction_1	285318.32611780596	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	641	1789	55.0	1	True	AATAAA	-13
PB.3477.6	chr14	+	1991	6	full-splice_match	PPM1A	ENST00000395076.8	8184	6	-65	6258	-65	98	multi-exon	FALSE	canonical	1	146045	junction_1	206174.74648520854	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	496	1644	35.0	3	True	TTTAAA	-14
PB.3477.7	chr14	+	2218	7	novel_in_catalog	PPM1A	novel	1713	6	NA	NA	-69	-13	combination_of_known_junctions	FALSE	canonical	1	13483	junction_1	280564.80936437246	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	210	1358	60.0	15	False	AATAAA	-10
PB.3477.8	chr14	+	2339	6	full-splice_match	PPM1A	ENST00000395076.8	8184	6	100	5745	-73	-13	multi-exon	FALSE	canonical	1	146045	junction_1	206174.74648520854	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	331	1479	60.0	-208	False	AATAAA	-10
PB.3477.9	chr14	+	3548	6	full-splice_match	PPM1A	ENST00000395076.8	8184	6	-42	4678	-42	1054	multi-exon	FALSE	canonical	1	146045	junction_1	206174.74648520854	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	473	1621	30.0	5	True	AATAAA	-13
PB.9996.11	chr6	-	2367	7	incomplete-splice_match	CUL7	ENST00000265348.7	5254	26	-151	11485	95	-3515	3prime_fragment	FALSE	canonical	1	111127	junction_6	77252.35815476588	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	238	2091	25.0	0	True	AATAAA	-26
PB.11846.1	chr9	+	3098	4	incomplete-splice_match	TOR1B	ENST00000259339.6	2769	5	-20	0	-20	0	intron_retention	FALSE	canonical	1	205860	junction_1	22161.010887492375	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	81	914	15.0	-388	False	AATAAA	-17
PB.11846.2	chr9	+	2610	5	full-splice_match	TOR1B	ENST00000259339.6	2769	5	7	152	3	-152	multi-exon	FALSE	canonical	1	205860	junction_1	153636.31392594005	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	54	1064	55.0	5	True	NA	NA
PB.7712.9	chr22	+	2827	4	novel_not_in_catalog	RNF185	novel	563	5	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	38294.78403995336	NA	3	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-45	True	ATTAAA	-14
PB.11323.4	chr8	+	2296	15	incomplete-splice_match	TBC1D31	ENST00000327098.9	2985	20	-30	22797	1	-15	3prime_fragment	FALSE	canonical	1	58572	junction_10	20728.921399526676	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2208	88	2295	65.0	-53	True	NA	NA
PB.11323.5	chr8	+	4063	22	novel_in_catalog	TBC1D31	novel	653	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	4503	junction_1	29519.661515520966	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	682	3852	30.0	-32	True	AATAAA	-19
PB.11323.6	chr8	+	3643	8	novel_in_catalog	TBC1D31	novel	653	3	NA	NA	-9	5	combination_of_known_junctions	FALSE	canonical	1	4503	junction_1	43125.56271244824	NA	4	NA	TRUE	NA	NA	NA	C	coding	341	1026	682	1707	35.0	-32	True	AATAAA	-38
PB.11323.7	chr8	+	3381	21	novel_in_catalog	TBC1D31	novel	653	3	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	11539	junction_16	28936.870467623135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1035	3108	62	3169	25.0	-27	True	AATAAA	-20
PB.6066.1	chr19	+	1986	6	full-splice_match	NECTIN2	ENST00000252485.8	2112	6	117	9	117	-6	multi-exon	FALSE	canonical	1	405293	junction_5	373166.2555491319	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	235	1674	30.0	-5	True	AATAAA	-12
PB.11323.1	chr8	+	3459	22	full-splice_match	TBC1D31	ENST00000287380.5	3502	22	43	0	0	0	multi-exon	FALSE	canonical	1	53310	junction_19	23996.843911339998	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	48	3248	30.0	-13	True	AATAAA	-19
PB.11323.2	chr8	+	3368	21	novel_in_catalog	TBC1D31	novel	653	3	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	1	23393	junction_18	26966.761124530698	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	152	3157	30.0	-117	False	AATAAA	-19
PB.6066.2	chr19	+	2691	9	full-splice_match	NECTIN2	ENST00000252483.9	2466	9	-229	4	122	-4	multi-exon	FALSE	canonical	1	107744	junction_8	419433.0424661814	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	230	1846	5.0	0	True	NA	NA
PB.10513.4	chr7	-	3570	5	full-splice_match	URGCP	ENST00000402306.7	3563	5	-9	2	2	0	multi-exon	FALSE	canonical	1	27926	junction_4	94277.43802038481	NA	7	NA	TRUE	NA	NA	NA	C	coding	922	2769	50	2818	35.0	-29	True	NA	NA
PB.10513.5	chr7	-	3322	7	novel_not_in_catalog	URGCP-MRPS24	novel	795	7	NA	NA	-30	-9357	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	95673.59610095614	NA	1	NA	TRUE	NA	NA	NA	B	coding	841	2526	45	2570	35.0	-24	True	NA	NA
PB.10513.6	chr7	-	2852	1	novel_in_catalog	URGCP-MRPS24	novel	795	7	NA	NA	27818	-9362	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	685	2058	48	2105	45.0	-8810	False	NA	NA
PB.11323.8	chr8	+	3357	21	full-splice_match	TBC1D31	ENST00000522420.5	3167	21	-4	-186	-4	0	multi-exon	FALSE	canonical	1	4206	junction_2	30361.833627763655	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2838	309	3146	30.0	-27	True	AATAAA	-19
PB.10513.1	chr7	-	4151	6	full-splice_match	URGCP	ENST00000426198.5	885	6	-337	-2929	-337	0	multi-exon	FALSE	canonical	1	19448	junction_5	87508.63623071725	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	733	3399	35.0	-23	False	NA	NA
PB.10513.2	chr7	-	3936	7	novel_in_catalog	URGCP-MRPS24	novel	795	7	NA	NA	-19822	-9357	no_combination_of_known_junctions	FALSE	canonical	1	1176	junction_6	108337.91514310932	NA	2	NA	TRUE	NA	NA	NA	B	coding	888	2667	518	3184	35.0	-12	True	NA	NA
PB.10513.3	chr7	-	3566	6	full-splice_match	URGCP	ENST00000453200.5	4042	6	476	0	0	0	multi-exon	FALSE	canonical	1	69879	junction_5	69015.84911192501	NA	1	NA	TRUE	NA	NA	NA	C	coding	931	2796	19	2814	35.0	2	True	NA	NA
PB.2215.19	chr11	+	2202	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-18	1	any annotated donor/acceptor	FALSE	canonical	1	88	junction_5	61768.708688461345	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	80	1612	25.0	0	True	AATAAA	-17
PB.2215.18	chr11	+	2387	3	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-22	16728	any annotated donor/acceptor	FALSE	canonical	1	442	junction_2	75108.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	352	1059	84	1142	35.0	-4	True	AATAAA	-21
PB.6369.1	chr2	+	3217	15	full-splice_match	AGBL5	ENST00000360131.4	3177	15	-39	-1	-4	1	multi-exon	FALSE	canonical	1	37182	junction_13	139341.02637407114	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	199	2859	15.0	-26	True	AATAAA	-19
PB.6369.3	chr2	+	1971	7	full-splice_match	AGBL5	ENST00000489683.5	1850	7	-15	-106	-2	106	multi-exon	FALSE	canonical	1	147675	junction_1	100092.87457448374	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	175	1608	5.0	-2	True	NA	NA
PB.6369.2	chr2	+	3059	14	novel_in_catalog	AGBL5	novel	559	3	NA	NA	-10	-7	no_combination_of_known_junctions	TRUE	canonical	1	2945	junction_13	139734.31714757197	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	183	2600	35.0	-10	True	AATAAA	-11
PB.2215.11	chr11	+	2896	3	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-25	21757	any annotated donor/acceptor	FALSE	canonical	1	151	junction_2	75253.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	87	1139	75.0	-7	True	NA	NA
PB.2215.10	chr11	+	2164	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-56	11	any annotated donor/acceptor	FALSE	canonical	1	656	junction_4	59575.37059355989	NA	1	1	TRUE	NA	NA	NA	C	coding	408	1227	118	1344	30.0	-847	False	AATAAA	-27
PB.2215.13	chr11	+	3294	5	full-splice_match	TYR	ENST00000263321.5	2485	5	419	-1228	-22	1228	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	84	1673	30.0	-4	True	AATAAA	-17
PB.2215.12	chr11	+	1453	3	full-splice_match	TYR	ENST00000526139.1	1446	3	-22	15	-22	-15	multi-exon	FALSE	canonical	1	329	junction_2	75164.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	84	1187	55.0	-4	True	NA	NA
PB.2215.15	chr11	+	3024	5	full-splice_match	TYR	ENST00000263321.5	2485	5	419	-958	-22	958	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	84	1673	15.0	-4	True	NA	NA
PB.2215.14	chr11	+	3071	1	novel_in_catalog	TYR	novel	2485	5	NA	NA	-22	-19670	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	283	852	84	935	65.0	-4	True	NA	NA
PB.2215.17	chr11	+	2398	3	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-22	21262	any annotated donor/acceptor	FALSE	canonical	1	151	junction_2	75253.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	84	1136	35.0	-4	True	NA	NA
PB.2215.16	chr11	+	2475	4	incomplete-splice_match	TYR	ENST00000263321.5	2485	5	423	9775	-18	-9324	3prime_fragment	FALSE	canonical	1	90342	junction_3	24632.835091939105	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	80	1543	20.0	0	True	NA	NA
PB.1870.8	chr11	+	3021	4	novel_in_catalog	ARL14EP	novel	2430	4	NA	NA	-23	224	combination_of_known_junctions	FALSE	canonical	1	16879	junction_2	119867.84673408739	NA	3	NA	TRUE	NA	NA	NA	C	coding	148	447	919	1365	20.0	6	True	AATAAA	-14
PB.3467.5	chr14	+	5616	24	full-splice_match	ARID4A	ENST00000355431.7	5891	24	171	104	0	-101	multi-exon	FALSE	canonical	1	83625	junction_1	37161.239960052735	NA	1	NA	TRUE	NA	NA	NA	C	coding	1257	3774	203	3976	25.0	-19	True	ATTAAA	-21
PB.3467.4	chr14	+	2113	18	incomplete-splice_match	ARID4A	ENST00000395168.7	4051	24	-1	13038	-1	16	3prime_fragment	FALSE	canonical	1	83625	junction_1	32422.46454592608	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1908	204	2111	80.0	-20	True	NA	NA
PB.3467.3	chr14	+	2578	20	incomplete-splice_match	ARID4A	ENST00000395168.7	4051	24	-30	7791	22	-865	3prime_fragment	FALSE	canonical	1	83625	junction_1	32710.070075066935	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2346	233	2578	60.0	-49	True	AAAACA	-10
PB.3467.2	chr14	+	1696	16	incomplete-splice_match	ARID4A	ENST00000395168.7	4051	24	-1	21065	-1	-8011	3prime_fragment	FALSE	canonical	1	83625	junction_1	33342.22012297455	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1491	204	1694	50.0	-20	True	ATTAAA	-13
PB.3467.1	chr14	+	1497	15	incomplete-splice_match	ARID4A	ENST00000395168.7	4051	24	-51	24508	1	-11454	3prime_fragment	FALSE	canonical	1	83625	junction_1	34109.14598485759	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1242	254	1495	75.0	-70	True	NA	NA
PB.7392.3	chr20	-	1941	2	novel_not_in_catalog	AL162457.2	novel	937	2	NA	NA	-88	-13550	any annotated donor/acceptor	FALSE	canonical	1	807	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-86	False	NA	NA
PB.1870.1	chr11	+	1789	4	full-splice_match	ARL14EP	ENST00000282032.3	2430	4	48	593	-34	-593	multi-exon	FALSE	canonical	1	148710	junction_3	66626.63513607418	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	171	950	70.0	-5	True	NA	NA
PB.8885.15	chr4	+	3700	24	full-splice_match	SMARCAD1	ENST00000354268.8	4912	24	-182	1394	-1	-1	multi-exon	FALSE	canonical	1	87000	junction_1	69926.82129922131	NA	1	NA	TRUE	NA	NA	NA	C	coding	1026	3081	256	3336	30.0	0	True	AATATA	-21
PB.1870.3	chr11	+	3763	4	full-splice_match	ARL14EP	ENST00000282032.3	2430	4	54	-1387	-28	1387	multi-exon	FALSE	canonical	1	148710	junction_3	66626.63513607418	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	165	944	55.0	1	True	AATAAA	-13
PB.1870.2	chr11	+	2799	4	novel_in_catalog	ARL14EP	novel	2430	4	NA	NA	-29	-4	combination_of_known_junctions	FALSE	canonical	1	16879	junction_2	119867.84673408739	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	925	1371	25.0	0	True	AATAAA	-16
PB.1870.5	chr11	+	2600	4	full-splice_match	ARL14EP	ENST00000282032.3	2430	4	55	-225	-27	225	multi-exon	FALSE	canonical	1	148710	junction_3	66626.63513607418	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	164	943	25.0	2	True	AATAAA	-15
PB.1870.4	chr11	+	4059	4	full-splice_match	ARL14EP	ENST00000282032.3	2430	4	55	-1684	-27	1684	multi-exon	FALSE	canonical	1	148710	junction_3	66626.63513607418	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	164	943	50.0	2	True	AATAAA	-30
PB.1870.7	chr11	+	2370	4	full-splice_match	ARL14EP	ENST00000282032.3	2430	4	57	3	-25	-3	multi-exon	FALSE	canonical	1	148710	junction_3	66626.63513607418	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	162	941	25.0	4	True	AATAAA	-17
PB.1870.6	chr11	+	2014	4	full-splice_match	ARL14EP	ENST00000282032.3	2430	4	55	361	-27	-361	multi-exon	FALSE	canonical	1	148710	junction_3	66626.63513607418	NA	3	NA	TRUE	NA	NA	NA	C	coding	259	780	164	943	30.0	2	True	NA	NA
PB.7960.1	chr3	-	1955	7	novel_not_in_catalog	METTL6	novel	4020	7	NA	NA	3	909	any annotated donor/acceptor	TRUE	canonical	1	242	junction_1	69266.85298819984	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	253	1107	45.0	-6	True	AATAAA	-14
PB.7960.3	chr3	-	2037	6	full-splice_match	METTL6	ENST00000383790.7	1335	6	-26	-676	-4	676	multi-exon	FALSE	canonical	1	102761	junction_2	39660.42271383401	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	268	1122	80.0	-1	True	NA	NA
PB.7960.2	chr3	-	2268	6	full-splice_match	METTL6	ENST00000383790.7	1335	6	-25	-908	-3	908	multi-exon	FALSE	canonical	1	102761	junction_2	39660.42271383401	NA	3	NA	TRUE	NA	NA	NA	C	coding	284	855	267	1121	45.0	0	True	AATAAA	-13
PB.12085.14	chrX	+	3144	13	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	-13	0	intron_retention	FALSE	canonical	1	10740	junction_2	539340.1302660592	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	167	2929	20.0	-2	True	AATAAA	-19
PB.12085.15	chrX	+	3934	9	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	825891	junction_1	384259.86010069976	NA	1	NA	TRUE	NA	NA	NA	C	coding	268	807	165	971	20.0	0	True	AATAAA	-18
PB.12085.16	chrX	+	1747	7	incomplete-splice_match	MAGED1	ENST00000326587.11	2747	13	27	4545	-10	1338	3prime_fragment	FALSE	canonical	1	825891	junction_1	321826.6153147012	NA	2	NA	TRUE	NA	NA	NA	C	coding	528	1584	164	1747	65.0	1	True	NA	NA
PB.12085.17	chrX	+	2624	12	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2713	junction_1	526007.5757782855	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2247	163	2409	20.0	11	True	AATAAA	-19
PB.12085.10	chrX	+	2838	14	novel_not_in_catalog	MAGED1	novel	2701	13	NA	NA	-14	-4	any annotated donor/acceptor	FALSE	canonical	1	1557	junction_10	651319.265779657	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	168	2627	25.0	-3	True	AATAAA	-15
PB.12085.11	chrX	+	2810	12	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	-14	0	intron_retention	FALSE	canonical	1	825891	junction_1	328251.91579827777	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	168	2087	20.0	-3	True	AATAAA	-19
PB.12085.12	chrX	+	2676	12	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	-14	0	no_combination_of_known_junctions	FALSE	canonical	1	6888	junction_8	561631.0508460423	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	168	1910	20.0	-3	True	AATAAA	-19
PB.12085.13	chrX	+	2652	12	novel_in_catalog	MAGED1	novel	2701	13	NA	NA	-14	-4	no_combination_of_known_junctions	FALSE	canonical	1	2751	junction_9	565589.040311204	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	168	2441	25.0	-3	True	AATAAA	-15
PB.3906.19	chr15	-	3861	9	full-splice_match	ICE2	ENST00000561114.5	3796	9	-66	1	6	-1	multi-exon	FALSE	canonical	1	110180	junction_7	54877.323749062096	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	230	1381	20.0	-14	True	AATAAA	-15
PB.1113.1	chr1	-	2300	6	full-splice_match	NSL1	ENST00000366977.7	2317	6	5	12	-1	-12	multi-exon	FALSE	canonical	1	331972	junction_2	67983.84016220325	NA	3	NA	TRUE	NA	NA	NA	C	coding	281	846	15	860	45.0	-1	True	ATTAAA	-24
PB.6746.7	chr2	+	3725	3	novel_in_catalog	CCDC74A	novel	1080	2	NA	NA	484	-1	intron_retention	FALSE	canonical	1	140349	junction_2	14235.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	419	1318	10.0	NA	False	AATAAA	-14
PB.9235.13	chr5	+	3046	13	novel_not_in_catalog	GPBP1	novel	4683	13	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	381974.7058719988	NA	11	3	TRUE	NA	NA	NA	C	coding	302	909	1808	2716	35.0	-40	True	AATAAA	-20
PB.7970.2	chr3	-	2911	11	full-splice_match	SATB1	ENST00000338745.10	7810	11	1538	3361	774	137	multi-exon	FALSE	canonical	1	150375	junction_10	62279.196231887894	NA	2	NA	TRUE	NA	NA	NA	A	coding	763	2292	198	2489	95.0	2006	False	NA	NA
PB.7970.1	chr3	-	3280	11	novel_in_catalog	TBC1D5	novel	2088	9	NA	NA	-332	-704708	no_combination_of_known_junctions	FALSE	canonical	1	45253	junction_10	88398.16001982168	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	568	2859	90.0	442	False	NA	NA
PB.777.13	chr1	+	3801	27	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	28	-108	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	376027.74236031796	NA	1	1	TRUE	NA	NA	NA	C	coding	1086	3261	92	3352	25.0	-753	False	NA	NA
PB.11333.1	chr8	-	5009	14	full-splice_match	MTSS1	ENST00000518547.5	4944	14	-65	0	-65	0	multi-exon	FALSE	canonical	1	69187	junction_4	45609.33798554075	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	540	2807	45.0	0	True	AATAAA	-14
PB.777.12	chr1	+	5020	24	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	3	-2	intron_retention	FALSE	canonical	1	205789	junction_1	313348.3044697032	NA	1	NA	TRUE	NA	NA	NA	C	coding	689	2070	2600	4669	5.0	-8	True	AATAAA	-21
PB.1362.31	chr10	-	2890	16	full-splice_match	ITGB1	ENST00000302278.7	3640	16	-43	793	-20	-193	multi-exon	FALSE	canonical	1	381	junction_3	1886954.2506506746	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	109	2505	30.0	-33	True	ATTAAA	-18
PB.1362.30	chr10	-	3479	16	full-splice_match	ITGB1	ENST00000396033.6	3784	16	-60	365	-60	-292	multi-exon	FALSE	canonical	1	381	junction_3	2048315.0837756381	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	197	2593	30.0	6	True	NA	NA
PB.1362.33	chr10	-	2397	15	incomplete-splice_match	ITGB1	ENST00000302278.7	3640	16	-33	8008	-10	-6836	3prime_fragment	FALSE	canonical	1	381	junction_2	1715043.9741228386	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2298	99	2396	55.0	-23	True	NA	NA
PB.1362.32	chr10	-	3051	16	novel_not_in_catalog	ITGB1	novel	3729	16	NA	NA	2	-4383	any annotated donor/acceptor	FALSE	canonical	1	381	junction_3	1886312.9173051105	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	87	2552	50.0	-11	True	AATAAA	-16
PB.11768.1	chr9	+	2080	8	novel_in_catalog	MRRF	novel	1841	6	NA	NA	-5	-52	intron_retention	FALSE	canonical	1	80395	junction_1	35972.75906197094	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	86	562	70.0	-12	True	NA	NA
PB.8760.11	chr4	-	5666	36	full-splice_match	ATP8A1	ENST00000264449.14	8209	36	-36	2579	-24	2019	multi-exon	FALSE	canonical	1	76866	junction_29	47825.682042387976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1149	3450	257	3706	70.0	-37	True	NA	NA
PB.224.1	chr1	+	3544	10	novel_not_in_catalog	SESN2	novel	3453	10	NA	NA	-46	3	any annotated donor/acceptor	FALSE	canonical	1	1724	junction_3	83615.66175966183	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	368	1852	5.0	-1	True	AATAAA	-28
PB.11947.8	chrX	+	3144	11	novel_not_in_catalog	GYG2	novel	1956	11	NA	NA	29	-7	any annotated donor/acceptor	FALSE	canonical	1	1195	junction_2	33209.194949742465	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	162	1547	40.0	13	True	ATTAAA	-6
PB.11947.9	chrX	+	3348	12	novel_not_in_catalog	GYG2	novel	1956	11	NA	NA	56	-7	any annotated donor/acceptor	FALSE	canonical	1	4934	junction_1	41580.403161319286	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	246	1751	40.0	-310	False	ATTAAA	-6
PB.11947.4	chrX	+	2661	11	full-splice_match	GYG2	ENST00000398806.7	1956	11	140	-845	14	-532	multi-exon	FALSE	canonical	1	42721	junction_1	21546.033001227857	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	177	1589	30.0	-2	True	AATAAA	-21
PB.11947.5	chrX	+	3078	11	novel_not_in_catalog	GYG2	novel	1956	11	NA	NA	17	-7	any annotated donor/acceptor	FALSE	canonical	1	2788	junction_4	34291.425553482026	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	174	1481	40.0	1	True	ATTAAA	-6
PB.11947.6	chrX	+	3729	11	full-splice_match	GYG2	ENST00000398806.7	1956	11	144	-1917	18	537	multi-exon	FALSE	canonical	1	42721	junction_1	21546.033001227857	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	173	1585	30.0	2	True	AATAAA	-24
PB.11947.7	chrX	+	2968	9	novel_in_catalog	GYG2	novel	1956	11	NA	NA	19	-7	combination_of_known_junctions	FALSE	canonical	1	11293	junction_8	28178.626747224127	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	172	1371	40.0	3	True	ATTAAA	-6
PB.11947.1	chrX	+	3182	11	full-splice_match	GYG2	ENST00000398806.7	1956	11	154	-1380	28	0	multi-exon	FALSE	canonical	1	42721	junction_1	21546.033001227857	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	163	1575	10.0	12	True	ATTAAA	-16
PB.11947.2	chrX	+	3282	12	novel_not_in_catalog	GYG2	novel	1956	11	NA	NA	8	-7	any annotated donor/acceptor	FALSE	canonical	1	5375	junction_3	38998.65849292683	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	183	1685	40.0	-8	True	ATTAAA	-6
PB.11947.3	chrX	+	3044	10	novel_in_catalog	GYG2	novel	1956	11	NA	NA	14	-7	combination_of_known_junctions	FALSE	canonical	1	5931	junction_2	33711.10470885459	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	500	1447	40.0	-2	True	ATTAAA	-6
PB.8389.2	chr3	+	2981	23	novel_not_in_catalog	COPG1	novel	3078	24	NA	NA	-4	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_17	381253.1831954931	NA	4	1	TRUE	NA	NA	NA	C	coding	692	2079	109	2187	20.0	-4	True	AATAAA	-22
PB.10306.8	chr6	+	5806	1	novel_in_catalog	TMEM181	novel	5390	17	NA	NA	92784	-403	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.24.1	chr1	+	3211	20	full-splice_match	MIB2	ENST00000355826.9	3290	20	73	6	-2	0	multi-exon	TRUE	canonical	1	48405	junction_1	91664.86972261051	NA	0	NA	TRUE	NA	NA	NA	C	coding	999	3000	138	3137	5.0	-22	True	TATAAA	-16
PB.2945.5	chr12	-	3075	7	full-splice_match	RAB35	ENST00000544304.5	2449	7	-3	-623	-3	623	multi-exon	FALSE	canonical	1	2675	junction_6	344834.5516761142	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	2	406	20.0	-667	False	AATAAA	-19
PB.2945.4	chr12	-	2244	6	full-splice_match	RAB35	ENST00000229340.9	2945	6	72	629	0	-629	multi-exon	FALSE	canonical	1	342399	junction_5	194728.06898174697	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	118	723	40.0	-15	True	AATAAA	-38
PB.2945.7	chr12	-	1671	6	full-splice_match	RAB35	ENST00000229340.9	2945	6	0	1274	0	-3	multi-exon	FALSE	canonical	1	342399	junction_5	194728.06898174697	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	190	795	15.0	-1	True	ATTAAA	-10
PB.2945.6	chr12	-	2179	5	full-splice_match	RAB35	ENST00000534951.5	939	5	-79	-1161	-7	623	multi-exon	FALSE	canonical	1	39501	junction_1	206830.91227195706	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	197	655	20.0	-8	False	AATAAA	-19
PB.2945.1	chr12	-	2853	6	full-splice_match	RAB35	ENST00000229340.9	2945	6	52	40	-20	-40	multi-exon	FALSE	canonical	1	342399	junction_5	194728.06898174697	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	138	743	80.0	51	False	NA	NA
PB.10306.1	chr6	+	3835	17	novel_not_in_catalog	TMEM181	novel	5390	17	NA	NA	23642	-1280	any annotated donor/acceptor	FALSE	canonical	1	65821	junction_1	54956.08904669795	NA	2	1	TRUE	NA	NA	NA	B	coding	475	1428	148	1575	70.0	-39	True	AATATA	-34
PB.2945.3	chr12	-	2749	5	full-splice_match	RAB35	ENST00000534951.5	939	5	-8	-1802	-8	-7	multi-exon	FALSE	canonical	1	39501	junction_1	206830.91227195706	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	126	584	20.0	-23	True	AATAAA	-14
PB.2945.2	chr12	-	2969	5	novel_in_catalog	RAB35	novel	2945	6	NA	NA	-9	-7	intron_retention	FALSE	canonical	1	342399	junction_4	186301.38271427294	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	127	570	20.0	-24	True	AATAAA	-14
PB.3199.1	chr13	-	6346	1	full-splice_match	KCTD12	ENST00000377474.3	6225	1	-133	12	-133	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	coding	325	978	376	1353	15.0	3289	False	AATAAA	-14
PB.524.2	chr1	-	4084	11	full-splice_match	GBP2	ENST00000370466.3	2220	11	0	-1864	0	-4	multi-exon	FALSE	canonical	1	422522	junction_6	170492.76113149204	NA	1	NA	TRUE	NA	NA	NA	C	coding	591	1776	270	2045	35.0	-30	True	GATAAA	-42
PB.10205.5	chr6	-	1221	6	full-splice_match	ECHDC1	ENST00000454859.7	2341	6	46	1074	-1	-4	multi-exon	FALSE	canonical	1	191876	junction_5	205194.32375151123	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	231	1136	35.0	0	True	ATTAAA	-13
PB.9381.3	chr5	-	4921	10	novel_in_catalog	PJA2	novel	4889	10	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	1	4793	junction_9	301271.6146112083	NA	2	NA	TRUE	NA	NA	NA	C	coding	708	2127	276	2402	30.0	4238	False	AATAAA	-27
PB.1195.13	chr1	+	3534	16	novel_not_in_catalog	GNPAT	novel	839	6	NA	NA	1	-140	any annotated donor/acceptor	FALSE	canonical	1	2707	junction_12	170384.7931902636	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	163	1956	45.0	5	True	AATAAA	-20
PB.1195.12	chr1	+	3421	14	novel_in_catalog	GNPAT	novel	839	6	NA	NA	-1	-152	intron_retention	FALSE	canonical	1	16601	junction_1	170071.7480511434	NA	22	2	TRUE	NA	NA	NA	C	coding	564	1695	165	1859	50.0	3	True	AATAAA	-8
PB.1195.11	chr1	+	1842	9	incomplete-splice_match	GNPAT	ENST00000366647.8	2643	16	4	9672	-2	-1755	3prime_fragment	FALSE	canonical	1	306069	junction_2	85076.65253969138	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	166	1452	80.0	2	True	NA	NA
PB.2637.30	chr12	+	2543	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10362	12086	intron_retention	FALSE	canonical	1	457962	junction_3	1857793.4823161403	NA	1	NA	TRUE	NA	NA	NA	B	coding	278	837	350	1186	10.0	1	True	ATTAAA	-16
PB.777.19	chr1	+	3980	27	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	105541	junction_1	403593.2115663265	NA	1	NA	TRUE	NA	NA	NA	C	coding	1097	3294	130	3423	10.0	-3	True	TATAAA	-19
PB.9381.9	chr5	-	2762	3	novel_not_in_catalog	PJA2	novel	4889	10	NA	NA	70	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	463554.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-8	True	AATAAA	-26
PB.777.18	chr1	+	4032	27	novel_not_in_catalog	UBAP2L	novel	3411	25	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	2297	junction_1	375784.92887856445	NA	3	NA	TRUE	NA	NA	NA	C	coding	1086	3261	215	3475	10.0	-3	True	TATAAA	-19
PB.957.9	chr1	+	3251	19	full-splice_match	RALGPS2	ENST00000367634.6	7512	19	156	4105	-93	1361	multi-exon	FALSE	canonical	1	105634	junction_14	35017.54892114016	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	201	1874	35.0	1	True	ATTAAA	-16
PB.8760.13	chr4	-	4573	36	full-splice_match	ATP8A1	ENST00000264449.14	8209	36	-28	3664	-16	934	multi-exon	FALSE	canonical	1	76866	junction_29	47825.682042387976	NA	2	NA	TRUE	NA	NA	NA	C	coding	1149	3450	249	3698	25.0	-29	True	NA	NA
PB.10067.8	chr6	+	4218	23	novel_in_catalog	SENP6	novel	4644	23	NA	NA	-66	-1	no_combination_of_known_junctions	FALSE	canonical	1	12274	junction_1	170035.69130933477	NA	14	2	TRUE	NA	NA	NA	C	coding	1003	3012	898	3909	45.0	-19	True	AATAAA	-18
PB.10067.9	chr6	+	4087	23	full-splice_match	SENP6	ENST00000370010.6	4644	23	355	202	-63	-175	multi-exon	FALSE	canonical	1	103972	junction_5	128961.80948355497	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	662	3979	30.0	-16	True	AATAAA	-39
PB.3432.11	chr14	+	4770	14	full-splice_match	FRMD6	ENST00000395718.6	4828	14	55	3	-34	-3	multi-exon	FALSE	canonical	1	159380	junction_4	77071.40559401187	NA	1	1	TRUE	NA	NA	NA	C	coding	614	1845	231	2075	25.0	-34	True	AATAAA	-18
PB.10067.3	chr6	+	4414	24	novel_not_in_catalog	SENP6	novel	4644	23	NA	NA	-70	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	171444.81928381207	NA	26	4	TRUE	NA	NA	NA	C	coding	953	2862	1241	4102	40.0	-23	True	AATAAA	-21
PB.10067.4	chr6	+	4060	24	novel_not_in_catalog	SENP6	novel	4644	23	NA	NA	-70	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154504.79920614624	NA	2	1	TRUE	NA	NA	NA	C	coding	1105	3318	434	3751	45.0	-23	True	AATAAA	-18
PB.10067.5	chr6	+	5604	23	full-splice_match	SENP6	ENST00000370010.6	4644	23	348	-1308	-70	-1066	multi-exon	FALSE	canonical	1	103972	junction_5	128961.80948355497	NA	0	NA	TRUE	NA	NA	NA	C	coding	1105	3318	669	3986	40.0	-23	True	AATAAA	-8
PB.4699.1	chr17	+	4973	2	full-splice_match	ZFP3	ENST00000318833.3	5206	2	234	-1	234	1	multi-exon	FALSE	canonical	1	15542	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	502	1509	103	1611	20.0	15	True	NA	NA
PB.3432.10	chr14	+	4728	14	novel_not_in_catalog	FRMD6	novel	563	4	NA	NA	-34	-1	any annotated donor/acceptor	FALSE	canonical	1	11336	junction_1	115452.6192250187	NA	2	1	TRUE	NA	NA	NA	C	coding	614	1845	187	2031	20.0	-34	True	AATAAA	-20
PB.8055.1	chr3	-	1679	4	novel_not_in_catalog	ZNF852	novel	1099	3	NA	NA	17	3080	any annotated donor/acceptor	TRUE	canonical	1	10566	junction_1	12519.723967493142	NA	0	NA	TRUE	NA	NA	NA	A	coding	289	870	158	1027	20.0	-4	True	NA	NA
PB.8760.14	chr4	-	4438	36	full-splice_match	ATP8A1	ENST00000264449.14	8209	36	-53	3824	-41	774	multi-exon	FALSE	canonical	1	76866	junction_29	47825.682042387976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1149	3450	274	3723	15.0	-54	False	ACTAAA	-29
PB.11646.53	chr9	-	2896	20	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	0	158	any annotated donor/acceptor	FALSE	canonical	1	2582	junction_8	369669.0272456913	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	284	1570	75.0	5166	False	NA	NA
PB.2959.4	chr12	+	4373	5	full-splice_match	UNC119B	ENST00000344651.4	4404	5	29	2	6	-2	multi-exon	FALSE	canonical	1	171795	junction_1	106999.62373531974	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	12	767	5.0	6	True	AATAAA	-17
PB.2959.2	chr12	+	4552	6	novel_in_catalog	UNC119B	novel	4404	5	NA	NA	6	-2	intron_retention	FALSE	canonical	1	8967	junction_2	179473.15560985715	NA	2	NA	TRUE	NA	NA	NA	C	coding	125	378	35	412	5.0	-17	True	AATAAA	-17
PB.2959.3	chr12	+	4221	4	novel_in_catalog	UNC119B	novel	4404	5	NA	NA	9	-1	intron_retention	FALSE	canonical	1	2838	junction_3	120563.25013037762	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	32	517	5.0	-14	True	AATAAA	-18
PB.2959.1	chr12	+	4564	6	novel_not_in_catalog	UNC119B	novel	4404	5	NA	NA	6	-1	intron_retention	FALSE	canonical	1	4328	junction_2	180543.80389700446	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	35	412	5.0	-17	True	AATAAA	-18
PB.9134.16	chr5	-	2856	17	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	-1	-6	no_combination_of_known_junctions	FALSE	canonical	1	8826	junction_14	287738.77517967985	NA	2	NA	TRUE	NA	NA	NA	C	coding	531	1596	582	2177	45.0	0	True	AATAAA	-7
PB.3746.9	chr15	+	2397	11	novel_in_catalog	ARHGAP11A	novel	3318	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	1295	junction_1	118316.03826700758	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	737	2155	15.0	-50	False	ATTAAA	-14
PB.3746.8	chr15	+	2486	11	full-splice_match	ARHGAP11A	ENST00000567348.5	2422	11	-64	0	-15	0	multi-exon	FALSE	canonical	1	1295	junction_1	108836.04369330044	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	738	2243	10.0	-51	False	ATTAAA	-15
PB.3746.7	chr15	+	4510	12	full-splice_match	ARHGAP11A	ENST00000361627.7	5898	12	-15	1403	-15	436	multi-exon	FALSE	canonical	1	1295	junction_1	109993.14992923592	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	738	3809	35.0	-51	False	AATAAA	-39
PB.3746.6	chr15	+	4913	12	novel_in_catalog	ARHGAP11A	novel	3318	12	NA	NA	-14	-912	intron_retention	FALSE	canonical	1	1295	junction_1	120808.28581408993	NA	0	NA	TRUE	NA	NA	NA	C	coding	994	2985	737	3721	40.0	-50	False	ATTAAA	-13
PB.3746.5	chr15	+	2937	12	full-splice_match	ARHGAP11A	ENST00000361627.7	5898	12	-17	2978	-17	629	multi-exon	FALSE	canonical	1	1295	junction_1	109993.14992923592	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2196	740	2935	70.0	-53	False	AATAAA	-28
PB.3746.4	chr15	+	3672	13	novel_in_catalog	ARHGAP11A	novel	3318	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	1295	junction_2	119325.73917651143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	543	3614	30.0	-53	False	AATAAA	-23
PB.3746.3	chr15	+	5924	12	full-splice_match	ARHGAP11A	ENST00000361627.7	5898	12	-23	-3	-23	3	multi-exon	FALSE	canonical	1	1295	junction_1	109993.14992923592	NA	1	NA	TRUE	NA	NA	NA	C	coding	1023	3072	746	3817	55.0	-59	False	AATAAA	-25
PB.3746.2	chr15	+	4804	13	novel_in_catalog	ARHGAP11A	novel	3318	12	NA	NA	-14	-911	combination_of_known_junctions	FALSE	canonical	1	1295	junction_2	119325.73917651143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	540	3611	40.0	-50	False	ATTAAA	-14
PB.3746.1	chr15	+	3886	12	full-splice_match	ARHGAP11A	ENST00000361627.7	5898	12	-34	2046	-34	0	multi-exon	TRUE	canonical	1	1295	junction_1	109993.14992923592	NA	0	NA	TRUE	NA	NA	NA	C	coding	1023	3072	757	3828	30.0	-70	False	AATAAA	-23
PB.5860.1	chr19	+	4189	18	novel_not_in_catalog	MAU2	novel	4994	19	NA	NA	124	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	100165.8226280863	NA	3	1	TRUE	NA	NA	NA	B	coding	421	1266	627	1892	95.0	-40	False	NA	NA
PB.10999.19	chr8	+	2549	15	incomplete-splice_match	PCM1	ENST00000519253.5	6443	39	-47	67430	-9	270	3prime_fragment	FALSE	canonical	1	203848	junction_6	118220.14993260131	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2250	299	2548	60.0	-12	True	AAAACA	-9
PB.7908.6	chr3	+	2677	7	novel_not_in_catalog	ARL8B	novel	3005	7	NA	NA	18129	-2	any annotated donor/acceptor	FALSE	canonical	1	163	junction_1	164203.2470700057	NA	0	NA	TRUE	NA	NA	NA	C	coding	138	417	65	481	35.0	-739	False	AATAAA	-14
PB.10152.3	chr6	-	5584	7	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17259	-10254	any annotated donor/acceptor	FALSE	canonical	1	5087	junction_3	36799.23053543375	NA	7	1	TRUE	NA	NA	NA	C	coding	409	1230	159	1388	55.0	-11	True	ATTAAA	-16
PB.10152.2	chr6	-	3931	8	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17266	-10254	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	40770.358086857814	NA	2	NA	TRUE	NA	NA	NA	C	coding	697	2094	166	2259	55.0	-18	True	ATTAAA	-16
PB.10152.5	chr6	-	5532	7	full-splice_match	ZBTB24	ENST00000230122.3	5519	7	-19	6	-19	-6	multi-exon	FALSE	canonical	1	34694	junction_6	30397.46888402973	NA	1	NA	TRUE	NA	NA	NA	C	coding	697	2094	188	2281	55.0	-40	False	ATTAAA	-16
PB.3285.8	chr14	-	1824	10	full-splice_match	TTC5	ENST00000258821.7	4779	10	39	2916	-2	-13	multi-exon	FALSE	canonical	1	126386	junction_5	45779.35308265798	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	19	1341	75.0	-5	True	ATTAAA	-10
PB.10152.7	chr6	-	4325	7	full-splice_match	ZBTB24	ENST00000230122.3	5519	7	-12	1206	-12	-1206	multi-exon	FALSE	canonical	1	34694	junction_6	30397.46888402973	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	181	2274	40.0	-33	True	NA	NA
PB.10152.6	chr6	-	5320	6	novel_not_in_catalog	MICAL1	novel	3678	25	NA	NA	-17254	-10259	any annotated donor/acceptor	FALSE	canonical	1	945	junction_4	45283.79592039519	NA	20	1	TRUE	NA	NA	NA	C	coding	282	849	1226	2074	50.0	-6	True	ATTAAA	-11
PB.3285.5	chr14	-	2812	10	full-splice_match	TTC5	ENST00000258821.7	4779	10	45	1922	-1	981	multi-exon	FALSE	canonical	1	126386	junction_5	45779.35308265798	NA	2	NA	TRUE	NA	NA	NA	C	coding	440	1323	13	1335	50.0	1	True	NA	NA
PB.3285.4	chr14	-	4711	11	novel_not_in_catalog	TTC5	novel	875	5	NA	NA	-1	-249	any annotated donor/acceptor	FALSE	canonical	1	1478	junction_10	64323.46892884431	NA	3	NA	TRUE	NA	NA	NA	C	coding	391	1176	386	1561	20.0	-11	True	NA	NA
PB.3285.7	chr14	-	5003	9	full-splice_match	TTC5	ENST00000554157.5	5014	9	-2	13	-2	-13	multi-exon	FALSE	canonical	1	126386	junction_4	47897.42203641418	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	14	1075	75.0	0	True	ATTAAA	-10
PB.3285.6	chr14	-	2046	11	novel_not_in_catalog	TTC5	novel	4779	10	NA	NA	-3	-13	any annotated donor/acceptor	FALSE	canonical	1	1478	junction_10	64323.46892884431	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	388	1563	75.0	-13	True	ATTAAA	-10
PB.3285.1	chr14	-	4748	10	full-splice_match	TTC5	ENST00000258821.7	4779	10	31	0	-3	0	multi-exon	FALSE	canonical	1	126386	junction_5	45779.35308265798	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	27	1349	10.0	-13	True	NA	NA
PB.3285.2	chr14	-	4497	10	full-splice_match	TTC5	ENST00000258821.7	4779	10	35	247	1	-247	multi-exon	FALSE	canonical	1	126386	junction_5	45779.35308265798	NA	3	NA	TRUE	NA	NA	NA	C	coding	439	1320	26	1345	15.0	-9	True	NA	NA
PB.5410.12	chr18	+	6026	11	novel_not_in_catalog	RNMT	novel	1849	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	3001	junction_7	90272.50723609045	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	69	1181	20.0	23	True	NA	NA
PB.5410.11	chr18	+	6075	11	full-splice_match	RNMT	ENST00000543302.6	1849	11	44	-4270	0	0	multi-exon	FALSE	canonical	1	33997	junction_1	64790.278018002056	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	69	1499	20.0	23	True	NA	NA
PB.5410.10	chr18	+	2173	12	full-splice_match	RNMT	ENST00000383314.6	6250	12	33	4044	-10	229	multi-exon	FALSE	canonical	1	90771	junction_1	48034.1995889258	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	208	1638	40.0	13	True	CATAAA	-12
PB.1264.10	chr10	-	3762	18	novel_in_catalog	LARP4B	novel	1826	4	NA	NA	6	9	combination_of_known_junctions	FALSE	canonical	1	58532	junction_1	105264.0177612405	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	312	2633	35.0	4	True	AATAAA	-25
PB.1264.11	chr10	-	3662	18	full-splice_match	LARP4B	ENST00000612396.4	8546	18	1	4883	1	9	multi-exon	FALSE	canonical	1	116101	junction_17	77939.69091858415	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	317	2533	35.0	-1	True	AATAAA	-25
PB.9134.11	chr5	-	3056	1	novel_in_catalog	NSUN2	novel	3303	19	NA	NA	2406	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	114	345	2033	2377	45.0	NA	False	AATAAA	-7
PB.1153.14	chr1	+	2021	8	full-splice_match	CNIH3	ENST00000478120.5	785	8	-12	-1224	-7	12	multi-exon	FALSE	canonical	1	1027	junction_1	21043.67337181396	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-11	True	ATTAAA	-25
PB.9607.8	chr5	+	3007	18	full-splice_match	HMMR	ENST00000393915.8	3102	18	93	2	9	2	multi-exon	FALSE	canonical	1	115379	junction_3	88339.24286353389	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	51	2228	20.0	0	True	AATAAA	-28
PB.11044.3	chr8	+	2443	11	novel_in_catalog	PPP2R2A	novel	3940	10	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	32222	junction_4	265516.9060433064	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	861	1727	15.0	-20	True	AATAAA	-16
PB.8760.17	chr4	-	3328	23	novel_in_catalog	ATP8A1	novel	5918	14	NA	NA	0	-25235	combination_of_known_junctions	FALSE	canonical	1	14153	junction_17	52576.684895446204	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1746	684	2429	10.0	-1	True	AATAAA	-15
PB.9607.1	chr5	+	2383	18	full-splice_match	HMMR	ENST00000393915.8	3102	18	82	637	-2	70	multi-exon	TRUE	canonical	1	115379	junction_3	88339.24286353389	NA	1	NA	TRUE	NA	NA	NA	C	coding	725	2178	62	2239	25.0	-11	True	NA	NA
PB.9607.3	chr5	+	2908	17	novel_in_catalog	HMMR	novel	720	6	NA	NA	3	-2	no_combination_of_known_junctions	FALSE	canonical	1	1181	junction_6	111808.61691243252	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	910	2133	30.0	-6	True	AATAAA	-24
PB.9607.2	chr5	+	2335	17	full-splice_match	HMMR	ENST00000353866.7	2872	17	266	271	-2	70	multi-exon	FALSE	canonical	1	126954	junction_3	80209.9457462064	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	62	2191	25.0	-11	True	NA	NA
PB.9607.5	chr5	+	1625	14	incomplete-splice_match	HMMR	ENST00000393915.8	3102	18	88	8888	4	-8181	3prime_fragment	FALSE	canonical	1	115379	junction_3	94247.45213092817	NA	1	NA	TRUE	NA	NA	NA	C	coding	523	1569	56	1624	65.0	-5	True	ACTAAA	-3
PB.9607.4	chr5	+	2960	17	full-splice_match	HMMR	ENST00000353866.7	2872	17	272	-360	4	-2	multi-exon	FALSE	canonical	1	126954	junction_3	80209.9457462064	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	56	2185	30.0	-5	True	AATAAA	-24
PB.9607.7	chr5	+	1729	14	incomplete-splice_match	HMMR	ENST00000393915.8	3102	18	89	8783	5	-8076	3prime_fragment	FALSE	canonical	1	115379	junction_3	94247.45213092817	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1674	55	1728	45.0	-4	True	AAAACA	-12
PB.9607.6	chr5	+	2780	15	full-splice_match	HMMR	ENST00000432118.6	2084	15	5	-701	5	-2	multi-exon	FALSE	canonical	1	320	junction_1	97244.43940739318	NA	2	1	TRUE	NA	NA	NA	C	coding	638	1917	89	2005	30.0	-4	True	AATAAA	-24
PB.1464.29	chr10	-	2277	15	full-splice_match	P4HA1	ENST00000307116.6	2727	15	-85	535	39	-528	multi-exon	FALSE	canonical	1	275909	junction_6	244966.20321699692	NA	5	1	TRUE	NA	NA	NA	C	coding	534	1605	203	1807	10.0	403	False	AATAAA	-15
PB.1464.28	chr10	-	2219	15	full-splice_match	P4HA1	ENST00000373008.6	2727	15	-16	524	-16	-517	multi-exon	FALSE	canonical	1	448881	junction_14	195656.72187210896	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	20.0	-1	True	AATAAA	-26
PB.1214.3	chr1	-	5752	23	full-splice_match	ARID4B	ENST00000349213.7	5811	23	49	10	-2	-10	multi-exon	FALSE	canonical	1	79009	junction_7	59869.539925184865	NA	13	NA	TRUE	NA	NA	NA	C	coding	1226	3681	452	4132	15.0	-3	True	AATAAA	-15
PB.1464.21	chr10	-	2681	14	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	6824	junction_4	260723.2890905174	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	134	1684	35.0	-1	True	NA	NA
PB.1464.20	chr10	-	2826	16	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	94	-1	any annotated donor/acceptor	FALSE	canonical	1	243	junction_15	338793.393704226	NA	6	1	TRUE	NA	NA	NA	C	coding	534	1605	225	1829	35.0	582	False	NA	NA
PB.1464.22	chr10	-	2618	15	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	-1	any annotated donor/acceptor	FALSE	canonical	1	469	junction_9	382158.1993768539	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	134	682	35.0	-1	True	NA	NA
PB.1464.25	chr10	-	2444	16	novel_not_in_catalog	P4HA1	novel	2727	15	NA	NA	-15	-384	any annotated donor/acceptor	FALSE	canonical	1	9648	junction_15	336324.5063823132	NA	8	1	TRUE	NA	NA	NA	C	coding	534	1605	226	1830	30.0	0	True	ATTAAA	-13
PB.1464.27	chr10	-	2352	15	full-splice_match	P4HA1	ENST00000373008.6	2727	15	-16	391	-16	-384	multi-exon	FALSE	canonical	1	448881	junction_14	195656.72187210896	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	30.0	-1	True	ATTAAA	-13
PB.1464.26	chr10	-	2423	16	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	-384	no_combination_of_known_junctions	FALSE	canonical	1	20304	junction_7	280575.4668464717	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	134	1285	30.0	-1	True	ATTAAA	-13
PB.678.1	chr1	-	3328	14	full-splice_match	ANKRD35	ENST00000355594.8	3342	14	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	1001	3006	74	3079	15.0	34	True	AATAAA	-18
PB.8748.18	chr4	-	2325	16	full-splice_match	PDS5A	ENST00000503396.5	2685	16	359	1	-87	-1	multi-exon	FALSE	canonical	1	258091	junction_15	115537.01515318226	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	182	1984	25.0	11	True	AATAAA	-21
PB.11068.16	chr8	-	1972	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-55	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	192785.86750200338	NA	2	1	TRUE	NA	NA	NA	C	coding	179	540	954	1493	45.0	-1	True	NA	NA
PB.3299.1	chr14	+	2370	1	antisense	novelGene_HNRNPC_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.646.4	chr1	+	3137	13	full-splice_match	MAN1A2	ENST00000356554.7	8576	13	0	5439	0	111	multi-exon	FALSE	canonical	1	164367	junction_10	225100.74180444123	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	736	2661	75.0	-13	True	AATGAA	-3
PB.6443.29	chr2	-	4638	24	novel_not_in_catalog	LRPPRC	novel	6335	38	NA	NA	-1	7713	any annotated donor/acceptor	FALSE	canonical	1	19300	junction_1	271606.3996280763	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	44	2557	20.0	-2	True	AATAAA	-40
PB.8748.10	chr4	-	5356	33	novel_not_in_catalog	PDS5A	novel	7176	33	NA	NA	129	-1454	any annotated donor/acceptor	FALSE	canonical	1	4578	junction_32	137594.72911413145	NA	1	1	TRUE	NA	NA	NA	C	coding	1337	4014	175	4188	15.0	582	False	AATAAA	-16
PB.10043.8	chr6	+	2054	5	novel_not_in_catalog	KIAA1586	novel	2883	3	NA	NA	-57	3800	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	87014.12869578997	NA	1	1	TRUE	NA	NA	NA	C	coding	358	1077	67	1143	25.0	-3	True	NA	NA
PB.10043.9	chr6	+	3097	4	full-splice_match	KIAA1586	ENST00000370733.4	2933	4	144	-308	-54	294	multi-exon	FALSE	canonical	1	60510	junction_1	65889.47960705782	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	64	2427	30.0	0	True	NA	NA
PB.10043.6	chr6	+	5664	5	novel_not_in_catalog	KIAA1586	novel	2883	3	NA	NA	-69	3803	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	87014.12869578997	NA	16	NA	TRUE	NA	NA	NA	C	coding	787	2364	79	2442	20.0	-15	False	NA	NA
PB.10043.7	chr6	+	4727	5	novel_not_in_catalog	KIAA1586	novel	2883	3	NA	NA	-59	3800	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	87014.12869578997	NA	2	NA	TRUE	NA	NA	NA	C	coding	787	2364	69	2432	25.0	-5	True	NA	NA
PB.10043.4	chr6	+	2737	3	full-splice_match	KIAA1586	ENST00000545356.5	2883	3	138	8	-77	6	multi-exon	TRUE	canonical	1	21086	junction_2	19712.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	87	2369	5.0	-23	False	AATAAA	-31
PB.10043.5	chr6	+	1985	7	novel_not_in_catalog	KIAA1586	novel	2883	3	NA	NA	-73	3800	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	86151.36303767921	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	83	562	25.0	-19	False	NA	NA
PB.10043.2	chr6	+	1410	4	full-splice_match	KIAA1586	ENST00000370733.4	2933	4	116	1407	-82	772	multi-exon	FALSE	canonical	1	60510	junction_1	65889.47960705782	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1317	92	1408	60.0	-28	False	AATAAA	-16
PB.10043.3	chr6	+	3274	4	full-splice_match	KIAA1586	ENST00000370733.4	2933	4	121	-462	-77	448	multi-exon	FALSE	canonical	1	60510	junction_1	65889.47960705782	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	87	2450	50.0	-23	False	NA	NA
PB.10043.1	chr6	+	2803	4	full-splice_match	KIAA1586	ENST00000370733.4	2933	4	135	-5	-63	5	multi-exon	FALSE	canonical	1	60510	junction_1	65889.47960705782	NA	0	NA	TRUE	NA	NA	NA	C	coding	787	2364	73	2436	5.0	-9	True	AATAAA	-30
PB.10281.2	chr6	+	3251	29	novel_not_in_catalog	MTHFD1L	novel	3604	28	NA	NA	-14	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	120495.71493242095	NA	1	NA	TRUE	NA	NA	NA	C	coding	869	2610	257	2866	45.0	-8	True	AATAAA	-12
PB.11068.17	chr8	-	3665	3	novel_in_catalog	DUSP4	novel	5537	4	NA	NA	-16	-9	intron_retention	FALSE	canonical	1	404631	junction_2	34852.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	2240	3187	45.0	-3	True	NA	NA
PB.2541.1	chr12	+	2107	3	full-splice_match	ALG10B	ENST00000551464.1	571	3	-4	-1532	-4	1532	multi-exon	FALSE	canonical	1	6287	junction_2	6685.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	126	381	137	517	40.0	-16	True	AATAAA	-16
PB.11019.9	chr8	+	3763	9	full-splice_match	SLC39A14	ENST00000381237.5	4641	9	-28	906	-1	-850	multi-exon	FALSE	canonical	1	280425	junction_1	123955.96053336846	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	148	1626	65.0	-1	True	NA	NA
PB.11549.12	chr9	+	2027	8	novel_not_in_catalog	DCAF10	novel	3862	7	NA	NA	243	566	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	60928.370746613065	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	290	1528	25.0	0	True	AATAAA	-20
PB.54.2	chr1	-	1460	9	full-splice_match	ACOT7	ENST00000608083.5	1403	9	-61	4	-61	0	multi-exon	FALSE	canonical	1	303412	junction_4	256634.8422095829	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	24	1136	10.0	-6	True	AATAAA	-17
PB.1240.24	chr1	-	3105	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	-2	29	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	1904400.8788093852	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	184	2316	30.0	-8	True	ATTAAA	-13
PB.11445.7	chr9	+	1541	5	full-splice_match	MLANA	ENST00000381477.7	2415	5	91	783	-15	-783	multi-exon	FALSE	canonical	1	249254	junction_1	24580.27739367479	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	70	426	25.0	0	True	CATAAA	-17
PB.10281.1	chr6	+	3371	29	novel_not_in_catalog	MTHFD1L	novel	3604	28	NA	NA	11	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121296.13790579223	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	134	2986	45.0	-20	True	AATAAA	-12
PB.7382.6	chr20	+	2420	7	novel_not_in_catalog	STX16-NPEPL1	novel	3433	23	NA	NA	19236	-10917	any annotated donor/acceptor	FALSE	canonical	1	40618	junction_6	149415.92839192957	NA	1	NA	TRUE	NA	NA	NA	B	coding	324	975	28	1002	65.0	0	True	NA	NA
PB.2573.4	chr12	-	1132	4	full-splice_match	ASB8	ENST00000317697.7	2615	4	81	1402	1	240	multi-exon	FALSE	canonical	1	174353	junction_3	46049.61267541297	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	90	956	55.0	-18	True	NA	NA
PB.2573.2	chr12	-	2918	3	full-splice_match	ASB8	ENST00000535988.3	679	3	-4	-2235	0	747	multi-exon	FALSE	canonical	1	174353	junction_2	54136.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	235	708	1528	2235	100.0	-1	True	NA	NA
PB.2573.3	chr12	-	1716	4	full-splice_match	ASB8	ENST00000317697.7	2615	4	4	895	0	747	multi-exon	FALSE	canonical	1	174353	junction_3	46049.61267541297	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	167	1033	100.0	-1	True	NA	NA
PB.11692.3	chr9	-	1001	2	full-splice_match	MRPL50	ENST00000374865.4	3332	2	-3	2334	-3	-2334	multi-exon	FALSE	canonical	1	575835	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	26	502	20.0	-19	True	ATTAAA	-18
PB.2573.1	chr12	-	2575	4	full-splice_match	ASB8	ENST00000317697.7	2615	4	31	9	5	-8	multi-exon	FALSE	canonical	1	174353	junction_3	46049.61267541297	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	140	1006	40.0	-2	True	AATAAA	-8
PB.11068.14	chr8	-	2182	4	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-12	82	any annotated donor/acceptor	FALSE	canonical	1	186	junction_2	209032.6077279704	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	412	1107	45.0	1	True	AATAAA	-19
PB.447.2	chr1	+	1617	11	full-splice_match	ATG4C	ENST00000317868.8	2938	11	2	1319	2	-1319	multi-exon	FALSE	canonical	1	52956	junction_1	48721.310432294405	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	206	1582	55.0	0	True	TTTAAA	-35
PB.9466.8	chr5	+	3606	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	0	3406	0	1321	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	372	1760	65.0	0	True	AAGAAA	-10
PB.8096.5	chr3	-	1492	1	novel_in_catalog	IP6K2	novel	1775	6	NA	NA	-7	-16370	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-9	True	NA	NA
PB.447.5	chr1	+	1569	11	full-splice_match	ATG4C	ENST00000371120.7	2890	11	2	1319	2	-1319	multi-exon	FALSE	canonical	1	50711	junction_1	49214.830345029135	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	158	1534	55.0	0	True	TTTAAA	-35
PB.11933.1	chr9	+	2779	4	novel_in_catalog	TUBBP5	novel	565	2	NA	NA	8	-2	intron_retention	FALSE	canonical	1	5796	junction_1	6181.095120517795	NA	5	NA	TRUE	NA	NA	NA	B	coding	298	897	1716	2612	15.0	NA	False	AATAAA	-13
PB.447.4	chr1	+	2656	11	full-splice_match	ATG4C	ENST00000371120.7	2890	11	-16	250	-16	-250	multi-exon	FALSE	canonical	1	50711	junction_1	49214.830345029135	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	176	1552	45.0	-66	False	AATAAA	-17
PB.1921.15	chr11	-	6633	44	novel_not_in_catalog	CKAP5	novel	7121	44	NA	NA	7	-2	any annotated donor/acceptor	FALSE	canonical	1	2488	junction_15	229057.34855668887	NA	4	NA	TRUE	NA	NA	NA	C	coding	2014	6045	108	6152	25.0	-12	True	AATAAA	-15
PB.620.2	chr1	-	1075	5	full-splice_match	RHOC	ENST00000369642.7	1355	5	278	2	3	0	multi-exon	FALSE	canonical	1	830392	junction_4	1429797.629644227	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	87	668	15.0	8320	False	AATAAA	-14
PB.1921.17	chr11	-	6495	43	full-splice_match	CKAP5	ENST00000312055.9	6532	43	30	7	18	-3	multi-exon	FALSE	canonical	1	5399	junction_8	227518.1071322424	NA	1	NA	TRUE	NA	NA	NA	C	coding	1972	5919	97	6015	30.0	-1	True	AATAAA	-14
PB.1921.11	chr11	-	6635	44	novel_not_in_catalog	CKAP5	novel	7121	44	NA	NA	18	-1	any annotated donor/acceptor	FALSE	canonical	1	5464	junction_28	227781.16103648764	NA	1	NA	TRUE	NA	NA	NA	C	coding	2018	6057	97	6153	25.0	-1	True	AATAAA	-16
PB.490.20	chr1	+	2231	9	full-splice_match	IFI44L	ENST00000370751.9	5874	9	66	3577	0	-231	multi-exon	FALSE	canonical	1	130560	junction_1	126586.90072707957	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	114	1472	80.0	21	True	NA	NA
PB.1266.10	chr10	+	3144	17	full-splice_match	GTPBP4	ENST00000360803.8	5075	17	418	1513	-25	1226	multi-exon	FALSE	canonical	1	567439	junction_1	133619.8808418253	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	44	1948	85.0	-25	True	NA	NA
PB.1266.11	chr10	+	2517	17	novel_not_in_catalog	GTPBP4	novel	5075	17	NA	NA	-25	493	any annotated donor/acceptor	FALSE	canonical	1	8582	junction_4	236962.6029157871	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	777	2054	20.0	-25	True	AATAAA	-15
PB.1266.12	chr10	+	2950	16	novel_in_catalog	GTPBP4	novel	5075	17	NA	NA	-23	1226	no_combination_of_known_junctions	FALSE	canonical	1	3005	junction_6	241253.16868646975	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	42	1754	85.0	-23	True	NA	NA
PB.1266.13	chr10	+	2498	16	novel_in_catalog	GTPBP4	novel	5075	17	NA	NA	-18	508	intron_retention	FALSE	canonical	1	567439	junction_1	133690.42722342623	NA	20	1	TRUE	NA	NA	NA	C	coding	287	864	1157	2020	15.0	-18	True	AATAAA	-30
PB.10426.1	chr7	+	6095	6	full-splice_match	SP4	ENST00000222584.7	6126	6	30	1	20	-1	multi-exon	FALSE	canonical	1	35470	junction_1	21188.264814278682	NA	21	1	TRUE	NA	NA	NA	C	coding	784	2355	189	2543	35.0	-36	True	AATAAA	-20
PB.11026.5	chr8	-	1856	8	novel_in_catalog	BIN3	novel	1835	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	246762	junction_3	46983.73299779577	NA	2	NA	TRUE	NA	NA	NA	C	coding	209	630	518	1147	30.0	19	True	AGTAAA	-18
PB.10426.3	chr7	+	5823	6	full-splice_match	SP4	ENST00000222584.7	6126	6	10	293	0	24	multi-exon	FALSE	canonical	1	35470	junction_1	21188.264814278682	NA	1	NA	TRUE	NA	NA	NA	C	coding	784	2355	209	2563	80.0	-4	True	TATAAA	-38
PB.10426.2	chr7	+	4618	6	full-splice_match	SP4	ENST00000222584.7	6126	6	7	1501	-2	-1184	multi-exon	FALSE	canonical	1	35470	junction_1	21188.264814278682	NA	2	NA	TRUE	NA	NA	NA	C	coding	784	2355	212	2566	40.0	-7	True	ATTAAA	-29
PB.6863.5	chr2	-	2466	5	novel_not_in_catalog	NFE2L2	novel	455	2	NA	NA	-71	-5	any annotated donor/acceptor	FALSE	canonical	1	14636	junction_1	553857.1277872571	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	810	1994	25.0	-27	True	AATAAA	-16
PB.8490.2	chr3	-	2945	8	incomplete-splice_match	VEPH1	ENST00000392832.6	3044	14	118218	-1164	337	-3	5prime_fragment	FALSE	canonical	1	24589	junction_4	3923.2983936624405	NA	5	NA	TRUE	NA	NA	NA	B	coding	515	1548	9	1556	25.0	NA	False	NA	NA
PB.2228.1	chr11	+	2211	1	full-splice_match	FUT4	ENST00000358752.3	6059	1	547	3301	547	-3301	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	405	1218	123	1340	60.0	0	True	ATTAAA	-13
PB.11019.4	chr8	+	1991	9	full-splice_match	SLC39A14	ENST00000381237.5	4641	9	-39	2689	-12	-88	multi-exon	FALSE	canonical	1	280425	junction_1	123955.96053336846	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	159	1637	50.0	-12	True	NA	NA
PB.11709.3	chr9	-	2501	19	full-splice_match	CTNNAL1	ENST00000374595.8	2522	19	18	3	8	-1	multi-exon	FALSE	canonical	1	27272	junction_1	165398.51256437035	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	63	2219	25.0	-6	True	AATAAA	-23
PB.8414.1	chr3	-	1198	3	full-splice_match	ANAPC13	ENST00000354910.9	1209	3	14	-3	11	1	multi-exon	FALSE	canonical	1	260629	junction_2	380840.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-28	False	ACTAAA	-20
PB.8414.2	chr3	-	1542	3	full-splice_match	ANAPC13	ENST00000510994.5	1840	3	298	0	-22	0	multi-exon	FALSE	canonical	1	284717	junction_2	368796.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-21	True	ACTAAA	-19
PB.11019.5	chr8	+	4737	10	novel_not_in_catalog	SLC39A14	novel	4641	9	NA	NA	-11	-4	any annotated donor/acceptor	FALSE	canonical	1	15779	junction_1	224763.2056434307	NA	4	NA	TRUE	NA	NA	NA	C	coding	492	1479	276	1754	30.0	-11	True	AATAAA	-21
PB.6580.2	chr2	-	1782	4	novel_in_catalog	EVA1A	novel	589	4	NA	NA	-4	1	no_combination_of_known_junctions	FALSE	canonical	1	2464	junction_2	47939.137263362965	NA	2	NA	TRUE	NA	NA	NA	C	coding	152	459	405	863	5.0	8	True	AATAAA	-18
PB.8497.6	chr3	+	2952	19	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	332	4326	-2	-407	3prime_fragment	FALSE	canonical	1	293192	junction_1	197298.59546856204	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2832	120	2951	65.0	-14	True	NA	NA
PB.6389.7	chr2	+	2769	5	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	5	1	any annotated donor/acceptor	FALSE	canonical	1	56	junction_2	754844.1708489823	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-361	False	AATAAA	-22
PB.11026.2	chr8	-	1818	9	full-splice_match	BIN3	ENST00000276416.10	1835	9	-1	18	-1	0	multi-exon	FALSE	canonical	1	246762	junction_3	44672.17243272791	NA	1	1	TRUE	NA	NA	NA	C	coding	253	762	71	832	90.0	-1	True	NA	NA
PB.11068.12	chr8	-	4025	3	novel_in_catalog	DUSP4	novel	5537	4	NA	NA	-51	316	intron_retention	FALSE	canonical	1	404631	junction_2	34852.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	315	948	2275	3222	85.0	3	True	AAGAAA	-28
PB.1532.3	chr10	+	1768	14	novel_in_catalog	RPP30	novel	2589	11	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	13897	junction_11	206046.21112009496	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	23	991	15.0	-9	True	NA	NA
PB.7855.4	chr22	+	5258	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	1	24337	junction_1	42110.588279552685	NA	5	NA	TRUE	NA	NA	NA	C	coding	440	1323	594	1916	65.0	49	False	AATAAA	-3
PB.7855.5	chr22	+	2944	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	1	24337	junction_1	42110.588279552685	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	653	1975	35.0	-10	True	AATAAA	-13
PB.7855.6	chr22	+	2257	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	-54	110	combination_of_known_junctions	FALSE	canonical	1	24337	junction_1	42110.588279552685	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	650	1972	30.0	-7	True	ATTAAA	-23
PB.7855.7	chr22	+	4392	8	full-splice_match	NUP50	ENST00000347635.8	5233	8	98	743	-47	-743	multi-exon	FALSE	canonical	1	24337	junction_1	45558.07209552688	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	369	1775	40.0	0	True	NA	NA
PB.7855.1	chr22	+	4440	8	novel_not_in_catalog	NUP50	novel	5233	8	NA	NA	-602	-597	any annotated donor/acceptor	FALSE	canonical	1	562	junction_1	49713.747599714945	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	271	1677	90.0	-700	False	NA	NA
PB.7855.2	chr22	+	3733	6	novel_in_catalog	NUP50	novel	5233	8	NA	NA	53	-597	no_combination_of_known_junctions	FALSE	canonical	1	9654	junction_3	36864.0462597366	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-45	False	NA	NA
PB.7855.3	chr22	+	2903	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	61	0	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	51043.50604738447	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	528	1934	35.0	-37	False	AATAAA	-13
PB.6389.4	chr2	+	4749	9	full-splice_match	PPP1CB	ENST00000358506.6	4771	9	33	-11	33	1	multi-exon	FALSE	canonical	1	117987	junction_1	641166.1381704726	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	128	1111	20.0	0	True	ATTAAA	-22
PB.7855.8	chr22	+	4346	7	novel_in_catalog	NUP50	novel	5233	8	NA	NA	-42	-597	combination_of_known_junctions	FALSE	canonical	1	12769	junction_3	51240.05630933024	NA	4	NA	TRUE	NA	NA	NA	C	coding	218	657	927	1583	90.0	5	True	NA	NA
PB.7855.9	chr22	+	4424	9	novel_in_catalog	NUP50	novel	5233	8	NA	NA	-107	-597	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	51043.50604738447	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	255	1661	90.0	236	False	NA	NA
PB.10300.1	chr6	+	1801	9	full-splice_match	ZDHHC14	ENST00000414563.6	3134	9	916	417	916	-1	multi-exon	FALSE	canonical	1	43444	junction_8	26159.435982786403	NA	1	NA	TRUE	NA	NA	NA	A	coding	449	1350	46	1395	75.0	496	False	NA	NA
PB.11026.3	chr8	-	1534	9	full-splice_match	BIN3	ENST00000276416.10	1835	9	6	295	-1	-1	multi-exon	FALSE	canonical	1	246762	junction_3	44672.17243272791	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	64	825	30.0	6	True	AGTAAA	-18
PB.11068.13	chr8	-	1997	5	novel_not_in_catalog	DUSP4	novel	5537	4	NA	NA	-57	85	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	192785.86750200338	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	250	1425	60.0	-3	True	AATAAA	-22
PB.9858.6	chr6	+	4645	18	full-splice_match	DDR1	ENST00000376568.7	3894	18	65	-816	-24	813	multi-exon	FALSE	canonical	1	140287	junction_1	251592.99429547033	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	294	2972	50.0	-37	True	NA	NA
PB.766.15	chr1	+	2180	14	incomplete-splice_match	INTS3	ENST00000503133.5	1896	18	6187	-760	-2651	0	5prime_fragment	FALSE	canonical	1	369917	junction_4	119404.27680559627	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	34	1371	5.0	-8000	False	AATAAA	-16
PB.6389.8	chr2	+	2158	5	novel_not_in_catalog	PPP1CB	novel	721	5	NA	NA	6	-609	any annotated donor/acceptor	FALSE	canonical	1	56	junction_2	754844.1708489823	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-360	False	AGTAAA	-17
PB.3601.1	chr14	-	3678	17	full-splice_match	GALC	ENST00000261304.6	3883	17	203	2	54	-2	multi-exon	FALSE	canonical	1	90173	junction_16	39210.48985105102	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	253	1962	35.0	0	True	NA	NA
PB.3601.3	chr14	-	3494	8	incomplete-splice_match	GALC	ENST00000622264.4	1221	10	-26	2451	-2	-2451	3prime_fragment	FALSE	canonical	1	90173	junction_7	33534.5080775013	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	17	928	15.0	-12	True	AATAAA	-22
PB.3601.2	chr14	-	3407	17	full-splice_match	GALC	ENST00000261304.6	3883	17	81	395	-12	314	multi-exon	FALSE	canonical	1	90173	junction_16	39210.48985105102	NA	1	NA	TRUE	NA	NA	NA	C	coding	685	2058	27	2084	35.0	-22	True	NA	NA
PB.4037.1	chr15	+	2854	2	full-splice_match	SNHG21	ENST00000544685.2	594	2	8	-2268	0	1	multi-exon	FALSE	canonical	1	138969	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-18
PB.4037.3	chr15	+	2728	2	full-splice_match	SNHG21	ENST00000544685.2	594	2	8	-2142	0	-125	multi-exon	FALSE	canonical	1	138969	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	AATAAA	-16
PB.4037.2	chr15	+	2736	3	novel_in_catalog	SNHG21	novel	594	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	89101	junction_2	24934.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-18
PB.12202.1	chrX	-	3787	3	full-splice_match	RAB9B	ENST00000243298.2	3748	3	-46	7	-46	-7	multi-exon	FALSE	canonical	1	15976	junction_2	4245.0	NA	2	NA	TRUE	NA	NA	NA	A	coding	201	606	332	937	25.0	-55	True	AATAAA	-22
PB.6854.1	chr2	+	1885	2	full-splice_match	HOXD9	ENST00000249499.7	1870	2	-19	4	-19	-4	multi-exon	FALSE	canonical	1	25282	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	342	1029	99	1127	20.0	-8075	False	AATAAA	-37
PB.8724.10	chr4	+	1528	11	full-splice_match	RBPJ	ENST00000348160.8	1752	11	215	9	1	-9	multi-exon	FALSE	canonical	1	102696	junction_7	142386.2501372938	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	15	1478	75.0	1	True	AAAAAG	-3
PB.8724.11	chr4	+	2027	10	novel_in_catalog	RBPJ	novel	609	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	102696	junction_7	141720.29802456964	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	23	1123	95.0	-7	True	NA	NA
PB.8724.12	chr4	+	5411	11	full-splice_match	RBPJ	ENST00000348160.8	1752	11	201	-3860	-6	-202	multi-exon	FALSE	canonical	1	102696	junction_7	142386.2501372938	NA	8	NA	TRUE	NA	NA	NA	C	coding	487	1464	29	1492	15.0	-13	True	AATAAA	-32
PB.8724.13	chr4	+	2004	14	novel_not_in_catalog	RBPJ	novel	609	5	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	667	junction_5	192340.07928764794	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	583	1827	100.0	0	True	NA	NA
PB.3633.1	chr14	+	2043	1	full-splice_match	AL122023.1	ENST00000622847.1	530	1	-1906	393	-1906	-393	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	134	405	2	406	20.0	-603	False	NA	NA
PB.1294.11	chr10	-	5320	22	novel_not_in_catalog	UPF2	novel	5569	21	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	2069	junction_19	72879.98536251162	NA	8	1	TRUE	NA	NA	NA	C	coding	869	2610	1437	4046	10.0	-4	True	AATAAA	-12
PB.1294.12	chr10	-	3341	3	incomplete-splice_match	UPF2	ENST00000357604.9	5193	22	-21	106646	-21	8391	3prime_fragment	FALSE	canonical	1	238584	junction_1	14131.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	382	1149	120	1268	100.0	-6	True	NA	NA
PB.11445.2	chr9	+	5677	4	novel_in_catalog	MLANA	novel	2415	5	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	249254	junction_1	27557.644134109545	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	5100	5444	25.0	-13	True	AATAAA	-16
PB.7272.6	chr20	+	1609	3	full-splice_match	TGIF2	ENST00000373872.8	3406	3	15	1782	15	27	multi-exon	FALSE	canonical	1	58745	junction_1	77558.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	159	872	80.0	6	True	AAAAAG	-7
PB.9910.4	chr6	-	1721	4	novel_in_catalog	AL645941.2	novel	612	4	NA	NA	26	-11254	intron_retention	FALSE	canonical	1	792247	junction_3	266900.96844710025	NA	1	NA	TRUE	NA	NA	NA	B	coding	161	486	990	1475	10.0	-46	True	AATAAA	-14
PB.8506.10	chr3	-	2829	2	incomplete-splice_match	BCHE	ENST00000497011.5	2522	5	3	55454	3	-50085	3prime_fragment	FALSE	canonical	1	62712	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	32	1675	30.0	-40	False	ATTAAA	-19
PB.3790.1	chr15	+	1521	3	full-splice_match	CHAC1	ENST00000617768.4	1560	3	34	5	34	-5	multi-exon	FALSE	canonical	1	224172	junction_1	1608.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	222	669	113	781	10.0	1	True	CATAAA	-15
PB.12274.1	chrX	+	1329	8	novel_not_in_catalog	HPRT1	novel	1407	9	NA	NA	78	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	363399.05721784185	NA	1	NA	TRUE	NA	NA	NA	A	coding	136	411	82	492	35.0	5	True	AATAAA	-14
PB.3582.1	chr14	+	3141	1	incomplete-splice_match	VASH1	ENST00000167106.8	5728	7	17684	2	1867	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	142	429	2578	3006	25.0	NA	False	AATAAA	-41
PB.11026.1	chr8	-	1974	10	novel_in_catalog	BIN3	novel	1835	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9705	junction_2	136508.14343021967	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	70	756	90.0	0	True	NA	NA
PB.2369.1	chr11	-	3617	4	full-splice_match	C11orf45	ENST00000524878.1	609	4	-30	-2978	-30	-14	multi-exon	FALSE	canonical	1	7381	junction_3	2018.0157471029693	NA	1	NA	TRUE	NA	NA	NA	A	coding	145	438	202	639	50.0	-1381	False	AATAAA	-20
PB.12329.2	chrX	+	2829	11	incomplete-splice_match	SLC6A8	ENST00000430077.6	1892	13	1893	-1258	-3	-8	5prime_fragment	FALSE	canonical	1	542863	junction_1	140012.7397887778	NA	1	NA	TRUE	NA	NA	NA	B	coding	270	813	646	1458	20.0	3073	False	AATAAA	-16
PB.12329.1	chrX	+	3068	13	novel_not_in_catalog	SLC6A8	novel	3763	13	NA	NA	-364	-8	any annotated donor/acceptor	FALSE	canonical	1	1199	junction_1	246485.88039157478	NA	3	1	TRUE	NA	NA	NA	B	coding	520	1563	135	1697	20.0	816	False	AATAAA	-16
PB.6651.11	chr2	+	3898	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39733	-122942	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	176230.01838829526	NA	1	NA	TRUE	NA	NA	NA	B	coding	161	486	60	545	85.0	32	True	NA	NA
PB.2569.3	chr12	-	4138	26	novel_in_catalog	HDAC7	novel	4095	26	NA	NA	1	-55	no_combination_of_known_junctions	FALSE	canonical	1	761	junction_25	163071.69872020834	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2859	220	3078	55.0	7518	False	NA	NA
PB.2569.2	chr12	-	4206	25	full-splice_match	HDAC7	ENST00000552960.5	3216	25	-66	-924	9	-1	multi-exon	TRUE	canonical	1	36679	junction_24	152978.326692999	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2925	168	3092	35.0	8	True	AATAAA	-15
PB.2569.1	chr12	-	4144	26	full-splice_match	HDAC7	ENST00000080059.11	4095	26	-105	56	-4	-52	multi-exon	FALSE	canonical	1	70160	junction_25	157037.21379800394	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	106	3081	70.0	12	True	NA	NA
PB.6651.10	chr2	+	3689	7	novel_not_in_catalog	AC079447.1	novel	1947	14	NA	NA	39714	-123172	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	176230.01838829526	NA	2	1	TRUE	NA	NA	NA	B	coding	161	486	79	564	15.0	13	True	AATAAA	-20
PB.1153.16	chr1	+	1948	7	novel_in_catalog	CNIH3	novel	876	6	NA	NA	0	12	no_combination_of_known_junctions	FALSE	canonical	1	245	junction_2	21118.243066652638	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	261	743	20.0	-4	True	ATTAAA	-25
PB.490.21	chr1	+	1672	9	novel_in_catalog	IFI44L	novel	554	3	NA	NA	0	-415	combination_of_known_junctions	FALSE	canonical	1	5325	junction_2	172986.00582268028	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	114	1097	95.0	21	True	NA	NA
PB.424.1	chr1	-	2649	6	novel_not_in_catalog	HSPB11	novel	894	6	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	410617.3510715785	NA	0	NA	TRUE	NA	NA	NA	B	coding	112	339	91	429	20.0	1	True	ATTAAA	-13
PB.424.2	chr1	-	4239	5	novel_not_in_catalog	HSPB11	novel	894	6	NA	NA	-375	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	479033.34651951684	NA	26	NA	TRUE	NA	NA	NA	B	coding	74	225	84	308	20.0	0	True	ATTAAA	-12
PB.11929.4	chr9	-	3165	9	novel_in_catalog	DPH7	novel	1311	2	NA	NA	12	0	intron_retention	FALSE	canonical	1	69887	junction_7	93132.15961437541	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	2005	2835	55.0	-24	True	ATTAAA	-13
PB.11929.5	chr9	-	3071	8	novel_in_catalog	DPH7	novel	1311	2	NA	NA	12	0	intron_retention	FALSE	canonical	1	91216	junction_6	86431.75289823308	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	1911	2741	55.0	-24	True	ATTAAA	-13
PB.351.1	chr1	+	3370	18	incomplete-splice_match	SZT2	ENST00000649403.1	5296	37	9528	-432	-1933	2	5prime_fragment	FALSE	canonical	1	85952	junction_8	42486.39511517013	NA	0	NA	TRUE	NA	NA	NA	A	coding	885	2658	34	2691	25.0	NA	False	NA	NA
PB.11929.7	chr9	-	3003	7	novel_in_catalog	DPH7	novel	1311	2	NA	NA	-13	0	intron_retention	FALSE	canonical	1	39828	junction_2	92666.49734292083	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	1909	2673	55.0	-22	True	ATTAAA	-13
PB.11929.1	chr9	-	3499	6	novel_in_catalog	DPH7	novel	1311	2	NA	NA	10	9	intron_retention	FALSE	canonical	1	91216	junction_4	79111.36811002575	NA	4	NA	TRUE	NA	NA	NA	C	coding	181	546	2610	3155	50.0	-26	True	ATTAAA	-27
PB.11929.2	chr9	-	2223	9	novel_in_catalog	DPH7	novel	1311	2	NA	NA	12	9	intron_retention	FALSE	canonical	1	48414	junction_6	100619.10669939569	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	1049	1879	50.0	-24	True	ATTAAA	-27
PB.11929.3	chr9	-	3251	10	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	3514	junction_9	122245.12609002223	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	2091	2921	55.0	26	True	ATTAAA	-13
PB.6863.2	chr2	-	2333	5	full-splice_match	NFE2L2	ENST00000397063.8	2651	5	260	58	-3	-55	multi-exon	FALSE	canonical	1	185164	junction_4	449858.7203147089	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	142	1911	75.0	-4	True	ATTAAA	-16
PB.9061.2	chr4	-	3573	6	novel_not_in_catalog	CBR4	novel	1198	6	NA	NA	-11	-3	any annotated donor/acceptor	FALSE	canonical	1	4142	junction_5	125372.18565120416	NA	3	NA	TRUE	NA	NA	NA	C	coding	138	417	600	1016	30.0	4049	False	AATAAA	-16
PB.6719.1	chr2	+	1989	17	novel_not_in_catalog	AC012447.1	novel	682	2	NA	NA	-81390	116754	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	3	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.4765.12	chr17	+	2532	7	incomplete-splice_match	PFAS	ENST00000314666.10	5371	28	16946	7	-40	-7	5prime_fragment	FALSE	canonical	1	251047	junction_2	40855.46028548558	NA	1	NA	TRUE	NA	NA	NA	C	coding	417	1254	65	1318	20.0	-2368	False	NA	NA
PB.11312.1	chr8	-	3174	26	novel_in_catalog	ENPP2	novel	3233	26	NA	NA	-19	6	combination_of_known_junctions	FALSE	canonical	1	125417	junction_6	92626.55752730963	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	79	2733	10.0	728	False	AATAAA	-23
PB.9856.1	chr6	-	1871	13	full-splice_match	FLOT1	ENST00000376389.7	1912	13	34	7	7	-7	multi-exon	FALSE	canonical	1	679585	junction_12	634195.2599612625	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	218	1471	25.0	10	True	AATAAA	-39
PB.4854.1	chr17	-	6975	38	incomplete-splice_match	KIAA0100	ENST00000528896.6	7407	39	-24	873	0	-431	3prime_fragment	TRUE	canonical	1	334252	junction_37	174760.87979527374	NA	0	NA	TRUE	NA	NA	NA	B	coding	2185	6558	100	6657	15.0	0	True	NA	NA
PB.4854.2	chr17	-	3382	16	incomplete-splice_match	KIAA0100	ENST00000528896.6	7407	39	-23	19863	1	-617	3prime_fragment	FALSE	canonical	1	334252	junction_15	147161.4227486115	NA	0	NA	TRUE	NA	NA	NA	B	coding	1025	3078	99	3176	15.0	1	True	CATAAA	-25
PB.9856.2	chr6	-	1437	10	novel_in_catalog	FLOT1	novel	1583	7	NA	NA	-14	-122	no_combination_of_known_junctions	FALSE	canonical	1	27180	junction_8	840891.0732824429	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	202	1152	25.0	-7	True	ATTAAA	-13
PB.9856.5	chr6	-	1598	12	novel_in_catalog	FLOT1	novel	1583	7	NA	NA	-9	-123	no_combination_of_known_junctions	FALSE	canonical	1	38105	junction_8	816061.2179558205	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	205	1314	25.0	-2	True	ATTAAA	-12
PB.9856.4	chr6	-	1731	13	full-splice_match	FLOT1	ENST00000376389.7	1912	13	59	122	3	-122	multi-exon	FALSE	canonical	1	679585	junction_12	634195.2599612625	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	193	1446	25.0	10	True	ATTAAA	-13
PB.9856.7	chr6	-	1650	12	novel_in_catalog	FLOT1	novel	1583	7	NA	NA	-7	-122	combination_of_known_junctions	FALSE	canonical	1	39878	junction_9	787748.3744110423	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	415	1365	25.0	0	True	ATTAAA	-13
PB.9856.6	chr6	-	1689	13	novel_in_catalog	FLOT1	novel	1583	7	NA	NA	11	-122	combination_of_known_junctions	FALSE	canonical	1	10030	junction_12	744542.3456590773	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	151	1404	25.0	21	True	ATTAAA	-13
PB.5693.2	chr19	-	1120	11	full-splice_match	EIF3G	ENST00000253108.8	1103	11	-15	-2	1	2	multi-exon	FALSE	canonical	1	2281037	junction_1	353284.67932262504	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	59	1021	5.0	-19	True	AATAAA	-18
PB.8068.7	chr3	+	3646	21	full-splice_match	SACM1L	ENST00000418611.5	2164	21	141	-1623	25	3	multi-exon	FALSE	canonical	1	20542	junction_2	124954.04807579267	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	434	1888	25.0	-14	True	AATAAA	-37
PB.5693.1	chr19	-	3310	9	novel_in_catalog	EIF3G	novel	1103	11	NA	NA	1	4	intron_retention	FALSE	canonical	1	2281037	junction_1	362815.25141038984	NA	2	NA	TRUE	NA	NA	NA	C	coding	144	435	1903	2337	0.0	-3	True	AATAAA	-20
PB.4154.1	chr16	-	862	5	full-splice_match	NME3	ENST00000219302.7	1069	5	172	35	-1	-1	multi-exon	TRUE	canonical	1	536630	junction_3	122935.18626292475	NA	0	NA	TRUE	NA	NA	NA	A	coding	169	510	25	534	35.0	1922	False	AATAAA	-39
PB.8346.35	chr3	-	1899	1	novel_in_catalog	PARP9	novel	3128	11	NA	NA	-21	-6512	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.7272.3	chr20	+	3284	3	novel_not_in_catalog	TGIF2	novel	3432	3	NA	NA	9	2	intron_retention	FALSE	non_canonical	0	0	junction_1	106930.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	292	768	30.0	0	True	AATAAA	-25
PB.10999.16	chr8	+	6146	38	novel_in_catalog	PCM1	novel	6820	39	NA	NA	75	-1	combination_of_known_junctions	FALSE	canonical	1	198012	junction_23	217596.32876462035	NA	3	1	TRUE	NA	NA	NA	C	coding	1961	5886	177	6062	45.0	-5543	False	AATAAA	-14
PB.10224.20	chr6	-	2644	5	full-splice_match	HBS1L	ENST00000367822.9	2793	5	53	96	-12	-96	multi-exon	FALSE	canonical	1	30405	junction_1	141895.78501734117	NA	2	NA	TRUE	NA	NA	NA	C	coding	632	1899	141	2039	40.0	24	False	AATAAA	-34
PB.10224.21	chr6	-	2096	5	full-splice_match	HBS1L	ENST00000367822.9	2793	5	66	631	1	208	multi-exon	FALSE	canonical	1	30405	junction_1	141895.78501734117	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	128	2026	35.0	0	True	ATTAAA	-19
PB.8363.11	chr3	-	1610	15	novel_not_in_catalog	SNX4	novel	2513	14	NA	NA	-4	64	any annotated donor/acceptor	FALSE	canonical	1	10804	junction_7	161920.11566492866	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	30	1478	20.0	0	True	AATAAA	-18
PB.8363.10	chr3	-	1516	14	full-splice_match	SNX4	ENST00000251775.8	2513	14	-5	1002	-5	65	multi-exon	FALSE	canonical	1	313769	junction_13	82493.48614578733	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	31	1383	20.0	-1	True	AATAAA	-19
PB.12380.1	chrY	+	2422	6	incomplete-splice_match	RPS4Y1	ENST00000250784.12	1305	7	116	314	116	-2	intron_retention	FALSE	canonical	1	1384496	junction_2	590423.2736478467	NA	0	NA	TRUE	NA	NA	NA	A	coding	265	798	24	821	10.0	0	True	AATAAA	-20
PB.579.2	chr1	+	2340	1	full-splice_match	PRMT6	ENST00000370078.1	2616	1	22	254	22	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	375	1128	16	1143	25.0	-8	True	AATAAA	-32
PB.579.1	chr1	+	2589	1	full-splice_match	PRMT6	ENST00000370078.1	2616	1	18	9	18	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	375	1128	20	1147	50.0	-12	True	ATTAAA	-13
PB.7272.2	chr20	+	3381	3	full-splice_match	TGIF2	ENST00000373872.8	3406	3	21	4	21	1	multi-exon	FALSE	canonical	1	58745	junction_1	77558.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	237	714	153	866	30.0	12	True	AATAAA	-24
PB.1931.1	chr11	-	1363	12	full-splice_match	PSMC3	ENST00000602866.5	1373	12	9	1	1	-1	multi-exon	FALSE	canonical	1	961741	junction_8	295896.08865652716	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	27	1298	0.0	-8	True	AATAAA	-21
PB.10737.18	chr7	+	2716	15	incomplete-splice_match	SRRT	ENST00000618411.4	2893	20	8313	0	778	0	5prime_fragment	FALSE	canonical	1	274134	junction_12	357380.51988478954	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	667	2601	10.0	-1505	False	AATAAA	-16
PB.1931.2	chr11	-	1524	11	novel_not_in_catalog	PSMC3	novel	1373	12	NA	NA	0	-6	intron_retention	FALSE	canonical	1	35345	junction_8	458041.57321152627	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	497	1360	0.0	-2	True	AATAAA	-16
PB.2984.4	chr12	-	2199	10	novel_in_catalog	RSRC2	novel	3520	10	NA	NA	1	328	combination_of_known_junctions	FALSE	canonical	1	402436	junction_3	285599.0120299248	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	96	1403	25.0	-13	True	AATAAA	-10
PB.5169.3	chr17	-	2288	6	full-splice_match	CYB561	ENST00000392976.5	3151	6	99	764	99	74	multi-exon	FALSE	canonical	1	52187	junction_5	149403.87917935732	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	202	957	90.0	2	True	NA	NA
PB.2984.6	chr12	-	1963	11	full-splice_match	RSRC2	ENST00000532695.5	2001	11	60	-22	0	22	multi-exon	FALSE	canonical	1	81213	junction_7	384630.35360445746	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	862	1473	20.0	-5	True	AATAAA	-35
PB.2984.7	chr12	-	1882	10	full-splice_match	RSRC2	ENST00000331738.11	3520	10	37	1601	0	0	multi-exon	FALSE	canonical	1	397956	junction_3	286350.87318912236	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	110	1414	40.0	-27	True	AATAAA	-13
PB.8380.1	chr3	-	3321	6	incomplete-splice_match	GATA2	ENST00000487848.5	1878	7	583	-1596	-31	4	5prime_fragment	FALSE	canonical	1	138993	junction_5	111348.02191220102	NA	0	NA	TRUE	NA	NA	NA	B	coding	480	1443	283	1725	0.0	8693	False	AATAAA	-19
PB.2984.2	chr12	-	4578	9	novel_in_catalog	RSRC2	novel	3520	10	NA	NA	-10	328	intron_retention	FALSE	canonical	1	402436	junction_3	284358.1565798667	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	3171	3782	25.0	22	False	AATAAA	-10
PB.2984.3	chr12	-	2293	11	novel_in_catalog	RSRC2	novel	3520	10	NA	NA	-5	328	combination_of_known_junctions	FALSE	canonical	1	81213	junction_7	385006.7708229169	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	889	1497	25.0	27	False	AATAAA	-10
PB.10992.5	chr8	+	1505	10	full-splice_match	TUSC3	ENST00000382020.8	3683	10	20	2158	10	32	multi-exon	FALSE	canonical	1	394118	junction_1	166924.7619308002	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	189	1232	20.0	-20	False	AATAAA	-24
PB.565.8	chr1	-	3197	11	full-splice_match	DBT	ENST00000370132.8	10799	11	2	7600	2	-7600	multi-exon	FALSE	canonical	1	119388	junction_3	26524.530343815703	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	13	1461	65.0	1	True	NA	NA
PB.8346.33	chr3	-	1921	9	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	-22	-5265	any annotated donor/acceptor	FALSE	canonical	1	41451	junction_8	141034.51492431737	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1800	121	1920	65.0	-1	True	NA	NA
PB.1903.8	chr11	+	3576	13	full-splice_match	API5	ENST00000420461.6	2009	13	-19	-1548	1	0	multi-exon	FALSE	canonical	1	614	junction_11	131978.0452651122	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	150	1502	5.0	-17	True	AATAAA	-18
PB.1903.9	chr11	+	4187	13	novel_in_catalog	API5	novel	560	4	NA	NA	-5	0	intron_retention	FALSE	canonical	1	614	junction_11	119129.9532127509	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	145	1392	5.0	-12	True	AATAAA	-18
PB.1903.6	chr11	+	1869	13	full-splice_match	API5	ENST00000534600.5	1760	13	-120	11	-2	-2	multi-exon	FALSE	canonical	1	614	junction_12	113273.0970203269	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	153	1685	45.0	-20	True	ATTAAA	-13
PB.1903.7	chr11	+	4917	13	novel_in_catalog	API5	novel	560	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	614	junction_11	126999.39950347425	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	151	1074	10.0	-18	True	AATAAA	-19
PB.1903.4	chr11	+	3635	14	full-splice_match	API5	ENST00000378852.7	3714	14	-30	109	-5	-109	multi-exon	FALSE	canonical	1	614	junction_12	123468.19371283465	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	156	1670	45.0	-23	True	NA	NA
PB.1903.5	chr11	+	3686	14	full-splice_match	API5	ENST00000531273.5	1868	14	48	-1866	34	1	multi-exon	FALSE	canonical	1	614	junction_12	116407.21306678694	NA	8	NA	TRUE	NA	NA	NA	C	coding	524	1575	92	1666	10.0	41	True	AATAAA	-19
PB.1903.2	chr11	+	3018	7	novel_in_catalog	API5	novel	560	4	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	2576	junction_6	139531.98217732497	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	168	1004	5.0	-35	False	AATAAA	-17
PB.12070.5	chrX	-	5039	3	novel_in_catalog	PIM2	novel	2075	6	NA	NA	-30	-2	intron_retention	FALSE	canonical	1	463316	junction_2	14876.5	NA	7	NA	TRUE	NA	NA	NA	C	coding	100	303	2945	3247	20.0	5368	False	AATAAA	-15
PB.8201.2	chr3	-	1096	10	full-splice_match	PDHB	ENST00000302746.10	1527	10	24	407	0	-345	multi-exon	FALSE	canonical	1	1012312	junction_8	186898.6371222991	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1077	20	1096	30.0	0	True	AATAAA	-17
PB.1903.1	chr11	+	3657	13	novel_in_catalog	API5	novel	560	4	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	614	junction_11	134839.949630082	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	168	1637	10.0	-35	False	AATAAA	-19
PB.7164.24	chr20	-	3538	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	25	877	any annotated donor/acceptor	FALSE	canonical	1	699	junction_19	116941.11656833964	NA	3	NA	TRUE	NA	NA	NA	C	coding	491	1476	866	2341	60.0	-6	True	AATAAA	-26
PB.7164.25	chr20	-	3181	19	novel_in_catalog	GPCPD1	novel	5489	20	NA	NA	1	706	combination_of_known_junctions	FALSE	canonical	1	48589	junction_4	111194.10344406037	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	680	2155	25.0	-30	True	AATAAA	-23
PB.7164.26	chr20	-	3221	20	full-splice_match	GPCPD1	ENST00000379019.5	5489	20	34	2234	34	703	multi-exon	FALSE	canonical	1	30025	junction_16	111115.82725336408	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	180	2198	25.0	3	True	AATAAA	-20
PB.3629.4	chr14	-	2976	9	novel_in_catalog	ITPK1	novel	6066	11	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	1	3859	junction_7	239731.6785891833	NA	1	NA	TRUE	NA	NA	NA	B	coding	372	1119	160	1278	30.0	1	True	AATAAA	-19
PB.3629.3	chr14	-	3071	9	novel_in_catalog	ITPK1	novel	6066	11	NA	NA	-35	-22	combination_of_known_junctions	FALSE	canonical	1	7258	junction_6	237529.738481015	NA	0	NA	TRUE	NA	NA	NA	B	coding	246	741	545	1285	55.0	2	True	AATAAA	-15
PB.7164.21	chr20	-	3358	19	novel_in_catalog	GPCPD1	novel	5489	20	NA	NA	-3	879	combination_of_known_junctions	FALSE	canonical	1	48589	junction_4	111194.10344406037	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	684	2159	55.0	-34	True	AATAAA	-28
PB.3629.1	chr14	-	3293	12	novel_not_in_catalog	ITPK1	novel	6066	11	NA	NA	-18	-21	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	264073.6413905963	NA	1	NA	TRUE	NA	NA	NA	B	coding	414	1245	262	1506	55.0	-12	True	AATAAA	-16
PB.10737.12	chr7	+	2786	20	novel_not_in_catalog	SRRT	novel	582	2	NA	NA	-9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	468545.18336509616	NA	1	1	TRUE	NA	NA	NA	C	coding	825	2478	194	2671	10.0	21	True	AATAAA	-16
PB.7164.28	chr20	-	3434	21	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	-13	695	any annotated donor/acceptor	FALSE	canonical	1	5276	junction_19	115140.70377025667	NA	2	NA	TRUE	NA	NA	NA	C	coding	623	1872	548	2419	25.0	-44	False	AATAAA	-12
PB.7164.29	chr20	-	3324	20	novel_not_in_catalog	GPCPD1	novel	5489	20	NA	NA	21	695	any annotated donor/acceptor	FALSE	canonical	1	5276	junction_18	115879.755576913	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	834	2309	25.0	-10	True	AATAAA	-12
PB.2973.2	chr12	-	2418	5	full-splice_match	RHOF	ENST00000267205.6	3009	5	588	3	-314	-3	multi-exon	FALSE	canonical	1	405336	junction_1	44485.024457675645	NA	34	1	TRUE	NA	NA	NA	C	coding	211	636	42	677	20.0	13	True	NA	NA
PB.5977.18	chr19	+	2498	13	novel_not_in_catalog	ACTN4	novel	1729	12	NA	NA	15	-54	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	959973.3835792302	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	62	1840	90.0	-2	True	NA	NA
PB.11497.1	chr9	-	2082	9	novel_not_in_catalog	APTX	novel	2023	8	NA	NA	0	4	any annotated donor/acceptor	FALSE	canonical	1	14464	junction_8	171369.96716388201	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	432	1196	15.0	-1	True	AATAAA	-18
PB.743.3	chr1	+	3846	16	novel_not_in_catalog	PIP5K1A	novel	373	4	NA	NA	-10	1	any annotated donor/acceptor	FALSE	canonical	1	2203	junction_2	98093.89343118606	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	630	2174	10.0	-11	True	AATAAA	-26
PB.1040.6	chr1	-	5586	27	full-splice_match	KDM5B	ENST00000367265.8	10341	27	1049	3706	0	3	multi-exon	FALSE	canonical	1	203318	junction_26	109707.08084915845	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	117	4751	40.0	-1	True	AATAAA	-17
PB.11145.2	chr8	+	3293	1	novel_in_catalog	SDCBP	novel	556	3	NA	NA	-6	-15799	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7597	False	AATAAA	-15
PB.1058.4	chr1	-	4206	14	full-splice_match	RBBP5	ENST00000367164.1	4290	14	-29	113	-29	-113	multi-exon	FALSE	canonical	1	36728	junction_1	63058.95237749154	NA	6	NA	TRUE	NA	NA	NA	C	coding	500	1503	172	1674	100.0	-42	False	NA	NA
PB.8664.10	chr4	-	2255	6	novel_in_catalog	POLN	novel	3253	26	NA	NA	-13	-23706	no_combination_of_known_junctions	FALSE	canonical	1	6389	junction_5	75540.27184912693	NA	0	NA	TRUE	NA	NA	NA	B	coding	568	1704	550	2253	40.0	-14	True	AATAAA	-15
PB.7830.11	chr22	-	1915	10	full-splice_match	NAGA	ENST00000402937.1	1869	10	-10	-36	-10	30	multi-exon	FALSE	canonical	1	54904	junction_9	100957.15028896733	NA	1	1	TRUE	NA	NA	NA	C	coding	411	1236	167	1402	35.0	8783	False	AATAAA	-15
PB.2100.1	chr11	+	2058	15	full-splice_match	ANKRD13D	ENST00000511455.6	2139	15	81	0	24	0	multi-exon	FALSE	canonical	1	159316	junction_1	124438.0510018654	NA	0	NA	TRUE	NA	NA	NA	A	coding	605	1818	90	1907	10.0	-66	False	AATAAA	-15
PB.7830.10	chr22	-	2066	8	novel_in_catalog	NAGA	novel	3694	9	NA	NA	44	30	intron_retention	FALSE	canonical	1	13073	junction_6	111326.63844960825	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	681	1553	35.0	3	True	AATAAA	-15
PB.8473.11	chr3	+	5551	10	full-splice_match	MBNL1	ENST00000324210.9	5465	10	-70	-16	-13	0	multi-exon	FALSE	canonical	1	530746	junction_1	234718.33746102825	NA	21	NA	TRUE	NA	NA	NA	C	coding	382	1149	990	2138	25.0	2	True	AATAAA	-37
PB.11588.9	chr9	+	2641	14	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-325	-29831	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	5213.330915141416	NA	1	NA	TRUE	NA	NA	NA	B	coding	236	711	711	1421	45.0	NA	False	AATAAA	-12
PB.7219.3	chr20	-	3186	7	novel_in_catalog	FRG1CP	novel	769	9	NA	NA	-179	75	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	153	462	362	823	20.0	NA	False	AATAAA	-26
PB.11588.7	chr9	+	3445	3	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-379	-205218	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	8.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	115	348	473	820	45.0	NA	False	AATAGA	-15
PB.11588.6	chr9	+	2717	14	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-401	-29831	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	8157.902374258285	NA	0	NA	TRUE	NA	NA	NA	B	coding	398	1197	401	1597	45.0	NA	False	AATAAA	-12
PB.11588.5	chr9	+	2283	12	novel_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-288	-29831	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8621.007823962722	NA	0	NA	TRUE	NA	NA	NA	B	coding	398	1197	288	1484	45.0	NA	False	AATAAA	-12
PB.11588.4	chr9	+	2710	13	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-408	-61528	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	8383.208375476937	NA	1	NA	TRUE	NA	NA	NA	B	coding	398	1197	408	1604	85.0	NA	False	NA	NA
PB.11588.3	chr9	+	2899	3	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-411	-197069	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	21.5	NA	6	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAGA	-43
PB.11588.2	chr9	+	2343	11	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-443	-66024	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	8868.94101006428	NA	3	NA	TRUE	NA	NA	NA	B	coding	398	1197	443	1639	90.0	NA	False	NA	NA
PB.11588.1	chr9	+	2356	12	novel_not_in_catalog	CNTNAP3P2	novel	3861	24	NA	NA	-325	-29831	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	8621.007823962722	NA	0	NA	TRUE	NA	NA	NA	B	coding	398	1197	325	1521	45.0	NA	False	AATAAA	-12
PB.819.1	chr1	+	3468	4	full-splice_match	SLC25A44	ENST00000359511.4	3482	4	13	1	13	0	multi-exon	FALSE	canonical	1	186204	junction_1	21556.6338487457	NA	2	NA	TRUE	NA	NA	NA	C	coding	314	945	160	1104	10.0	-15	True	ATTAAA	-20
PB.5844.3	chr19	-	3781	12	full-splice_match	ELL	ENST00000262809.8	4027	12	20	226	9	-224	multi-exon	FALSE	canonical	1	110647	junction_6	36467.76331374654	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	53	1918	20.0	10015	False	ATTAAA	-20
PB.743.1	chr1	+	3641	14	full-splice_match	PIP5K1A	ENST00000368890.8	3613	14	-29	1	-27	-1	multi-exon	TRUE	canonical	1	20743	junction_11	92363.00411833363	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	474	1976	15.0	-1910	False	AATAAA	-19
PB.8473.14	chr3	+	4042	10	full-splice_match	MBNL1	ENST00000324210.9	5465	10	-111	1534	-54	-974	multi-exon	FALSE	canonical	1	530746	junction_1	234718.33746102825	NA	3	NA	TRUE	NA	NA	NA	C	coding	382	1149	1031	2179	70.0	-1188	False	AATGAA	-7
PB.7458.11	chr21	-	2792	5	full-splice_match	HSPA13	ENST00000285667.3	3986	5	44	1150	44	-1150	multi-exon	FALSE	canonical	1	309356	junction_4	48688.41559857951	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	25	1440	45.0	2	True	AATAGA	-20
PB.3244.8	chr13	+	4086	30	novel_in_catalog	TPP2	novel	3931	29	NA	NA	-26	3	no_combination_of_known_junctions	FALSE	canonical	1	19821	junction_26	127589.9142475532	NA	0	NA	TRUE	NA	NA	NA	C	coding	1291	3876	63	3938	25.0	-28	True	ATTAAA	-26
PB.2214.1	chr11	+	3336	5	intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1916	junction_3	5662.007655196167	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-17	True	NA	NA
PB.7458.10	chr21	-	2985	5	full-splice_match	HSPA13	ENST00000285667.3	3986	5	41	960	41	-960	multi-exon	FALSE	canonical	1	309356	junction_4	48688.41559857951	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	28	1443	60.0	-1	True	AGTAAA	-32
PB.3244.4	chr13	+	4704	30	full-splice_match	TPP2	ENST00000376052.4	5447	30	-44	787	-24	710	multi-exon	FALSE	canonical	1	85601	junction_23	113833.28951513222	NA	1	NA	TRUE	NA	NA	NA	C	coding	1262	3789	61	3849	25.0	-26	True	AATAAA	-21
PB.3244.5	chr13	+	3944	29	full-splice_match	TPP2	ENST00000376065.8	3931	29	-15	2	-15	-2	multi-exon	FALSE	canonical	1	196105	junction_1	89829.27648818944	NA	0	NA	TRUE	NA	NA	NA	C	coding	1249	3750	52	3801	20.0	-17	True	ATTAAA	-21
PB.3244.6	chr13	+	3154	25	incomplete-splice_match	TPP2	ENST00000376052.4	5447	30	-65	22821	-45	12	3prime_fragment	FALSE	canonical	1	85601	junction_23	108101.50390173908	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3072	82	3153	70.0	0	True	NA	NA
PB.3244.7	chr13	+	4936	29	full-splice_match	TPP2	ENST00000376065.8	3931	29	-37	-968	-37	-529	multi-exon	FALSE	canonical	1	196105	junction_1	89829.27648818944	NA	1	NA	TRUE	NA	NA	NA	C	coding	1249	3750	74	3823	35.0	8	True	AATAAA	-18
PB.3244.1	chr13	+	3095	24	incomplete-splice_match	TPP2	ENST00000376065.8	3931	29	-25	21324	-25	12	3prime_fragment	FALSE	canonical	1	196105	junction_1	82851.2734361773	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3033	62	3094	70.0	-27	True	NA	NA
PB.3244.2	chr13	+	3717	28	incomplete-splice_match	TPP2	ENST00000376065.8	3931	29	-62	2087	-62	1963	3prime_fragment	FALSE	canonical	1	196105	junction_1	88124.86446577442	NA	0	NA	TRUE	NA	NA	NA	C	coding	1206	3618	99	3716	75.0	0	True	AATAAA	-41
PB.3244.3	chr13	+	2104	14	novel_not_in_catalog	TPP2	novel	3931	29	NA	NA	-53	5503	any annotated donor/acceptor	FALSE	canonical	1	30592	junction_13	97156.33076279661	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	90	1805	70.0	-85	False	TTTAAA	-4
PB.8361.15	chr3	-	2209	1	novel_in_catalog	SLC12A8	novel	2831	8	NA	NA	123	-318	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	132	399	99	497	95.0	10	True	NA	NA
PB.7458.12	chr21	-	2223	5	full-splice_match	HSPA13	ENST00000285667.3	3986	5	37	1726	37	-1726	multi-exon	FALSE	canonical	1	309356	junction_4	48688.41559857951	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	32	1447	40.0	-5	True	AATAAA	-18
PB.8361.11	chr3	-	1980	6	novel_not_in_catalog	SLC12A8	novel	2831	8	NA	NA	-1498	0	any annotated donor/acceptor	FALSE	canonical	1	2003	junction_5	44556.09124956991	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	216	1247	60.0	1530	False	NA	NA
PB.8361.10	chr3	-	2074	7	novel_not_in_catalog	SLC12A8	novel	2831	8	NA	NA	111	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	41791.11515122961	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	106	1341	60.0	-2	True	NA	NA
PB.9533.13	chr5	+	3432	9	novel_not_in_catalog	RNF14	novel	938	4	NA	NA	-36	2	any annotated donor/acceptor	FALSE	canonical	1	3057	junction_1	134840.06270526344	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	611	2035	25.0	27	False	NA	NA
PB.1476.2	chr10	-	3969	15	novel_not_in_catalog	AC022400.6	novel	5818	17	NA	NA	-198	-4785	any annotated donor/acceptor	FALSE	canonical	1	5520	junction_13	82110.37463148277	NA	0	NA	TRUE	NA	NA	NA	A	coding	815	2448	818	3265	5.0	-16	False	AATAAA	-17
PB.1476.1	chr10	-	3772	15	full-splice_match	NDST2	ENST00000309979.10	3749	15	-24	1	-24	-1	multi-exon	FALSE	canonical	1	132651	junction_14	46113.60748842947	NA	0	NA	TRUE	NA	NA	NA	A	coding	883	2652	582	3233	5.0	225	False	AATAAA	-19
PB.9533.10	chr5	+	2107	8	full-splice_match	RNF14	ENST00000394514.6	2905	8	28	770	3	-770	multi-exon	FALSE	canonical	1	60544	junction_3	143715.71125734333	NA	1	NA	TRUE	NA	NA	NA	C	coding	348	1047	436	1482	30.0	-67	False	TATAAA	-19
PB.9533.14	chr5	+	3561	10	novel_not_in_catalog	RNF14	novel	938	4	NA	NA	-32	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	169805.20758391742	NA	2	NA	TRUE	NA	NA	NA	C	coding	348	1047	1124	2170	35.0	31	False	NA	NA
PB.8071.7	chr3	-	8155	18	full-splice_match	FYCO1	ENST00000296137.6	8504	18	0	349	0	-349	multi-exon	FALSE	canonical	1	92521	junction_17	26446.96712682973	NA	9	NA	TRUE	NA	NA	NA	C	coding	1478	4437	207	4643	60.0	8	True	AATAAA	-36
PB.11203.12	chr8	-	1653	6	full-splice_match	TPD52	ENST00000379096.9	4041	6	63	2325	13	237	multi-exon	FALSE	canonical	1	739869	junction_2	126935.99078023537	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	53	607	15.0	1162	False	AATAAA	-17
PB.130.8	chr1	-	4343	26	novel_in_catalog	UBR4	novel	15906	106	NA	NA	109	-1	intron_retention	FALSE	canonical	1	318464	junction_24	177591.60265890954	NA	0	NA	TRUE	NA	NA	NA	B	coding	894	2685	1342	4026	30.0	NA	False	AATAAA	-21
PB.11203.10	chr8	-	2884	6	novel_in_catalog	AC036214.3	novel	1527	8	NA	NA	-90798	-117733	intron_retention	FALSE	canonical	1	9782	junction_3	351524.8647492237	NA	2	NA	TRUE	NA	NA	NA	B	coding	123	372	131	502	30.0	-10	True	AATAAA	-13
PB.130.1	chr1	-	4691	32	novel_not_in_catalog	UBR4	novel	15906	106	NA	NA	-2166	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	209014.74555028547	NA	0	NA	TRUE	NA	NA	NA	B	coding	982	2949	101	3049	30.0	NA	False	AATAAA	-22
PB.130.5	chr1	-	5931	39	incomplete-splice_match	UBR4	ENST00000375254.7	15906	106	88886	8	-2541	0	5prime_fragment	TRUE	canonical	1	316020	junction_33	181409.44132170864	NA	0	NA	TRUE	NA	NA	NA	B	coding	1733	5202	412	5613	30.0	9851	False	AATAAA	-22
PB.743.7	chr1	+	3671	14	novel_not_in_catalog	PIP5K1A	novel	373	4	NA	NA	-10	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	98742.83441002412	NA	48	3	TRUE	NA	NA	NA	C	coding	453	1362	647	2008	20.0	13	True	AATAAA	-17
PB.1161.5	chr1	-	3325	5	incomplete-splice_match	PYCR2	ENST00000343818.10	1689	7	-54	7	27	-7	intron_retention	FALSE	canonical	1	824438	junction_2	251979.51609753916	NA	3	NA	TRUE	NA	NA	NA	C	coding	273	822	1934	2755	25.0	-64	True	AATAAA	-11
PB.10396.4	chr7	+	1504	8	full-splice_match	ZDHHC4	ENST00000396713.6	1552	8	48	0	1	0	multi-exon	FALSE	canonical	1	135169	junction_1	188543.1683399679	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	402	1436	10.0	20	True	NA	NA
PB.10396.3	chr7	+	1592	8	full-splice_match	ZDHHC4	ENST00000396706.2	1942	8	-44	394	1	2	multi-exon	FALSE	canonical	1	27180	junction_1	218801.00432314363	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	488	1522	5.0	-1	True	NA	NA
PB.10396.2	chr7	+	1376	8	full-splice_match	ZDHHC4	ENST00000405731.7	1348	8	15	-43	-4	-2	multi-exon	FALSE	canonical	1	20253	junction_1	220821.1192251247	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	278	1312	15.0	-13	True	NA	NA
PB.10396.1	chr7	+	1353	8	full-splice_match	ZDHHC4	ENST00000335965.10	1259	8	-26	-68	-7	16	multi-exon	FALSE	canonical	1	115202	junction_1	193938.79645172303	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	235	1269	20.0	-35	True	NA	NA
PB.114.1	chr1	-	2002	1	antisense	novelGene_SPEN_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	NA	False	NA	NA
PB.6852.3	chr2	-	1353	4	full-splice_match	ATP5MC3	ENST00000497075.5	1313	4	-1	-39	-1	-2	multi-exon	FALSE	canonical	1	4231677	junction_3	1079602.3968925886	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	130	447	15.0	-3	True	ATTAAA	-12
PB.1221.9	chr1	-	5633	18	novel_in_catalog	NID1	novel	5412	17	NA	NA	-53	-11	no_combination_of_known_junctions	FALSE	canonical	1	6255	junction_8	120403.38995966247	NA	0	NA	TRUE	NA	NA	NA	C	coding	1156	3471	137	3607	50.0	-1	True	AATAAA	-9
PB.5113.24	chr17	+	3265	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	105761	junction_1	132472.34609942837	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	240	1754	20.0	31	True	AATAAA	-20
PB.2315.1	chr11	+	2751	14	novel_in_catalog	VPS11	novel	3313	16	NA	NA	-31	0	intron_retention	FALSE	canonical	1	2616	junction_4	129106.93025106001	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	35	2410	25.0	-31	True	AATAAA	-12
PB.2315.2	chr11	+	3192	16	full-splice_match	VPS11	ENST00000621676.4	3313	16	109	12	-20	1	multi-exon	FALSE	canonical	1	170303	junction_1	94786.84929705292	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	24	2849	20.0	-20	True	AATAAA	-14
PB.8734.23	chr4	-	2984	2	novel_in_catalog	TLR10	novel	3958	4	NA	NA	0	-29	no_combination_of_known_junctions	FALSE	canonical	1	1635	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	797	2394	78	2471	95.0	-1	True	NA	NA
PB.5113.20	chr17	+	2998	15	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	4	-1	intron_retention	FALSE	canonical	1	79433	junction_1	135112.36855701526	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	22	1278	20.0	14	True	AATAAA	-19
PB.5113.21	chr17	+	3448	13	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	9	-1	intron_retention	FALSE	canonical	1	105761	junction_1	137598.88864851184	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	252	1328	20.0	19	True	AATAAA	-19
PB.5113.22	chr17	+	3384	13	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	79433	junction_1	142835.7183269375	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	8	1264	20.0	28	True	AATAAA	-19
PB.5113.23	chr17	+	2723	18	novel_in_catalog	SPATA20	novel	3539	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	8645	junction_2	176086.56642654282	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	175	2535	20.0	28	True	AATAAA	-20
PB.1153.18	chr1	+	2265	8	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	22171.79839989788	NA	10	1	TRUE	NA	NA	NA	C	coding	178	537	539	1075	25.0	-3	True	ATTAAA	-10
PB.812.7	chr1	-	2655	13	novel_in_catalog	KHDC4	novel	2947	14	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	12384	junction_8	153525.69223882275	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	27	563	0.0	9	True	AATAAA	-15
PB.6188.4	chr19	-	3580	5	novel_not_in_catalog	ZNF611	novel	4796	9	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	2180.268031114523	NA	2	NA	TRUE	NA	NA	NA	C	coding	635	1908	346	2253	100.0	-1	True	NA	NA
PB.6188.1	chr19	-	3784	7	novel_in_catalog	ZNF611	novel	4796	9	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	11413	junction_2	10312.565442216597	NA	3	NA	TRUE	NA	NA	NA	C	coding	635	1908	550	2457	100.0	-1	True	NA	NA
PB.6188.2	chr19	-	3710	6	full-splice_match	ZNF611	ENST00000543227.5	4517	6	10	797	0	0	multi-exon	FALSE	canonical	1	22005	junction_1	7032.758815713788	NA	17	1	TRUE	NA	NA	NA	C	coding	705	2118	266	2383	100.0	-1	True	NA	NA
PB.6188.3	chr19	-	3615	5	full-splice_match	ZNF611	ENST00000540744.5	4417	5	5	797	0	0	multi-exon	FALSE	canonical	1	15850	junction_4	10497.77216841745	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2118	171	2288	100.0	-6	True	NA	NA
PB.7973.1	chr3	-	2272	7	full-splice_match	SGO1	ENST00000442720.5	2266	7	-7	1	-7	-1	multi-exon	FALSE	canonical	1	33748	junction_2	54335.828181218414	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	274	1050	10.0	-8	True	AATAAA	-17
PB.1503.1	chr10	+	4173	1	novel_in_catalog	NRG3	novel	2158	9	NA	NA	-362838	-605695	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	135	408	2666	3073	95.0	NA	False	AAAAAG	-45
PB.3570.21	chr14	-	2269	1	novel_in_catalog	NEK9	novel	8310	22	NA	NA	-10	-4279	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	135	408	143	550	95.0	-16	True	NA	NA
PB.3570.20	chr14	-	1541	11	novel_not_in_catalog	NEK9	novel	8310	22	NA	NA	-3	9689	any annotated donor/acceptor	FALSE	canonical	1	8431	junction_1	127067.60371743065	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	128	1351	70.0	-1	True	AATAAA	-8
PB.3570.22	chr14	-	2104	1	novel_in_catalog	NEK9	novel	8310	22	NA	NA	-7	-4441	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	135	408	140	547	90.0	-13	True	NA	NA
PB.7973.3	chr3	-	2958	8	incomplete-splice_match	SGO1	ENST00000263753.8	2338	9	-15	8892	0	-4	3prime_fragment	FALSE	canonical	1	53697	junction_7	41317.349596922184	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	156	1739	15.0	-1	True	AATAAA	-14
PB.1680.2	chr10	+	2124	3	novel_in_catalog	BAG3	novel	2571	4	NA	NA	10	-35	no_combination_of_known_junctions	FALSE	canonical	1	2566	junction_2	223738.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	441	1326	297	1622	80.0	-2	True	NA	NA
PB.8057.3	chr3	+	2952	6	full-splice_match	ZNF197	ENST00000383744.8	1989	6	2	-965	2	-2	multi-exon	FALSE	canonical	1	27098	junction_5	35672.398644330045	NA	1	1	TRUE	NA	NA	NA	C	coding	267	804	205	1008	25.0	2	True	NA	NA
PB.12143.3	chrX	+	1747	3	incomplete-splice_match	JPX	ENST00000415215.1	475	4	-25	-1112	0	1112	intron_retention	FALSE	canonical	1	121372	junction_2	119626.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	0	True	NA	NA
PB.1680.1	chr10	+	2398	4	full-splice_match	BAG3	ENST00000369085.7	2571	4	168	5	168	-5	multi-exon	FALSE	canonical	1	450042	junction_1	41757.98566608414	NA	2	NA	TRUE	NA	NA	NA	C	coding	575	1728	139	1866	20.0	-4	True	AATAAA	-15
PB.7703.2	chr22	-	2196	15	novel_in_catalog	PES1	novel	2295	15	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	4774	junction_9	295524.5631598435	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	64	1776	15.0	13	True	ATTAAA	-25
PB.12143.4	chrX	+	1997	6	novel_not_in_catalog	JPX	novel	9658	6	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	canonical	1	3225	junction_2	135100.799504074	NA	7	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	3	True	NA	NA
PB.1680.4	chr10	+	2169	4	novel_in_catalog	BAG3	novel	2571	4	NA	NA	12	-387	combination_of_known_junctions	FALSE	canonical	1	109767	junction_3	165962.02726393635	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	295	2019	50.0	0	True	AATAAA	-7
PB.7703.1	chr22	-	2567	14	novel_in_catalog	PES1	novel	2295	15	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	342052	junction_1	206970.82751012244	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	1296	2147	15.0	6	True	ATTAAA	-25
PB.8057.1	chr3	+	2171	6	novel_not_in_catalog	ZNF197	novel	546	3	NA	NA	-26	-125	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	45791.197666800545	NA	2	1	TRUE	NA	NA	NA	C	coding	267	804	240	1043	50.0	-76	False	NA	NA
PB.389.1	chr1	-	2741	14	novel_in_catalog	MKNK1	novel	2809	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	13776	junction_12	103853.87642897805	NA	1	1	TRUE	NA	NA	NA	C	coding	412	1239	336	1574	5.0	4	True	AATAAA	-23
PB.8057.6	chr3	+	6702	6	full-splice_match	ZNF197	ENST00000344387.8	3275	6	-4	-3423	-4	-135	multi-exon	FALSE	canonical	1	41744	junction_1	29310.21191735058	NA	29	NA	TRUE	NA	NA	NA	C	coding	1029	3090	190	3279	55.0	0	True	NA	NA
PB.11372.5	chr8	+	3057	13	novel_in_catalog	RHPN1	novel	3683	15	NA	NA	-44	41	intron_retention	FALSE	canonical	1	78437	junction_5	84370.94451586992	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	146	1348	10.0	0	True	ATTAAA	-28
PB.8057.4	chr3	+	3950	6	full-splice_match	ZNF197	ENST00000344387.8	3275	6	-7	-668	-7	-374	multi-exon	FALSE	canonical	1	41744	junction_1	29310.21191735058	NA	1	1	TRUE	NA	NA	NA	C	coding	1029	3090	193	3282	55.0	-3	True	AATAAA	-8
PB.3398.11	chr14	+	2573	22	novel_not_in_catalog	MIA2	novel	4392	28	NA	NA	-64	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	57640.12779813238	NA	5	NA	TRUE	NA	NA	NA	B	coding	724	2175	242	2416	40.0	-1754	False	AATAAA	-16
PB.3274.5	chr13	-	2265	8	novel_in_catalog	DCUN1D2	novel	3164	8	NA	NA	-16	173	no_combination_of_known_junctions	FALSE	canonical	1	6998	junction_7	44964.4301034786	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	224	739	40.0	3	True	NA	NA
PB.3274.4	chr13	-	3179	7	novel_not_in_catalog	DCUN1D2	novel	3164	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	1021	junction_6	47467.15441375108	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	235	969	5.0	19	True	ATTAAA	-16
PB.3274.6	chr13	-	2108	8	full-splice_match	DCUN1D2	ENST00000375403.6	3164	8	0	1056	0	172	multi-exon	FALSE	canonical	1	13719	junction_7	43442.12697605955	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	23	583	45.0	19	True	NA	NA
PB.3274.1	chr13	-	3085	7	full-splice_match	DCUN1D2	ENST00000478244.5	2045	7	189	-1229	-72	1	multi-exon	FALSE	canonical	1	13719	junction_6	43812.235294175785	NA	2	NA	TRUE	NA	NA	NA	C	coding	259	780	95	874	5.0	180	False	ATTAAA	-17
PB.3274.3	chr13	-	3193	8	full-splice_match	DCUN1D2	ENST00000375403.6	3164	8	-29	0	-29	0	multi-exon	FALSE	canonical	1	13719	junction_7	43442.12697605955	NA	1	NA	TRUE	NA	NA	NA	C	coding	186	561	52	612	5.0	-10	True	ATTAAA	-16
PB.3274.2	chr13	-	3359	8	novel_not_in_catalog	DCUN1D2	novel	3164	8	NA	NA	-33	0	any annotated donor/acceptor	FALSE	canonical	1	188	junction_7	46577.32162364699	NA	5	1	TRUE	NA	NA	NA	C	coding	171	516	263	778	5.0	219	False	ATTAAA	-16
PB.10693.3	chr7	-	2083	14	full-splice_match	BAIAP2L1	ENST00000005260.8	3622	14	-49	1588	-49	-1588	multi-exon	FALSE	canonical	1	163533	junction_13	74520.41484915352	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	266	1801	30.0	-28	True	AGTAAA	-22
PB.10693.2	chr7	-	2315	14	full-splice_match	BAIAP2L1	ENST00000005260.8	3622	14	-51	1358	-51	-1358	multi-exon	FALSE	canonical	1	163533	junction_13	74520.41484915352	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	268	1803	40.0	-30	True	TATAAA	-33
PB.10693.1	chr7	-	3438	14	full-splice_match	BAIAP2L1	ENST00000005260.8	3622	14	179	5	179	-5	multi-exon	TRUE	canonical	1	163533	junction_13	74520.41484915352	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	38	1573	30.0	200	False	AATAAA	-11
PB.7258.3	chr20	-	1710	2	full-splice_match	MMP24OS	ENST00000456790.1	712	2	-14	-984	-12	3	multi-exon	FALSE	canonical	1	76687	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	371	682	50.0	7579	False	NA	NA
PB.7258.2	chr20	-	1684	2	full-splice_match	MMP24OS	ENST00000424358.1	867	2	-14	-803	-12	14	multi-exon	FALSE	canonical	1	207831	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	71	216	102	317	45.0	7579	False	NA	NA
PB.7258.1	chr20	-	3381	3	full-splice_match	MMP24OS	ENST00000456350.5	634	3	-23	-2724	-1	1644	multi-exon	FALSE	canonical	1	2432	junction_1	7769.5	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-5	True	NA	NA
PB.7992.1	chr3	-	1360	1	antisense	novelGene_TGFBR2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	177	531	830	1360	85.0	-8227	False	NA	NA
PB.8582.25	chr3	-	3889	7	full-splice_match	ETV5	ENST00000421809.5	554	7	-113	-3222	0	3192	multi-exon	FALSE	canonical	1	44807	junction_6	90174.71510289838	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	750	248	997	35.0	-24	True	AATAAA	-20
PB.8582.24	chr3	-	5326	6	novel_in_catalog	ETV5	novel	4111	13	NA	NA	-8	3711	intron_retention	FALSE	canonical	1	44807	junction_5	96107.50690429962	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	225	590	70.0	-1	True	NA	NA
PB.1116.6	chr1	+	4378	9	novel_in_catalog	VASH2	novel	1369	9	NA	NA	0	-3	intron_retention	FALSE	canonical	1	6127	junction_1	24970.610054622215	NA	7	1	TRUE	NA	NA	NA	C	coding	276	831	550	1380	20.0	0	True	AATAAA	-16
PB.1412.5	chr10	-	2163	1	full-splice_match	CSTF2T	ENST00000331173.5	4105	1	166	1776	166	-1776	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	543	1632	96	1727	50.0	169	False	AATAAA	-10
PB.1412.4	chr10	-	2517	1	full-splice_match	CSTF2T	ENST00000331173.5	4105	1	-4	1592	-4	-1592	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	616	1851	47	1897	15.0	-1	True	NA	NA
PB.1412.1	chr10	-	4828	1	full-splice_match	CSTF2T	ENST00000331173.5	4105	1	-26	-697	-26	697	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	616	1851	69	1919	15.0	-23	True	AATAAA	-24
PB.1412.3	chr10	-	3633	1	full-splice_match	CSTF2T	ENST00000331173.5	4105	1	-16	488	-16	-488	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	616	1851	59	1909	45.0	-13	True	AATAAA	-20
PB.1412.2	chr10	-	4123	1	full-splice_match	CSTF2T	ENST00000331173.5	4105	1	-13	-5	-13	5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	616	1851	56	1906	25.0	-10	True	AATAAA	-22
PB.832.6	chr1	+	2161	8	novel_in_catalog	PRCC	novel	833	4	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	1	17271	junction_4	395219.22792004223	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	237	1808	15.0	1	True	AATAAA	-16
PB.8776.2	chr4	+	3436	2	full-splice_match	USP46-AS1	ENST00000503051.1	1048	2	-16	-2372	-16	2372	multi-exon	FALSE	canonical	1	12287	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-147	False	NA	NA
PB.11198.4	chr8	+	3309	9	full-splice_match	ZC2HC1A	ENST00000263849.8	3352	9	38	5	-4	-5	multi-exon	FALSE	canonical	1	115034	junction_1	14684.81561852242	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	65	1042	35.0	-4	True	AATAAA	-13
PB.6997.1	chr2	+	2658	1	novel_in_catalog	RPL37A	novel	3647	4	NA	NA	-22	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2620	False	AATAAA	-16
PB.6997.2	chr2	+	1677	3	full-splice_match	RPL37A	ENST00000490649.1	1701	3	17	7	-2	0	multi-exon	FALSE	canonical	1	21401101	junction_1	4287927.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	AATAAA	-16
PB.6997.3	chr2	+	370	4	full-splice_match	RPL37A	ENST00000491306.5	3647	4	655	2622	0	1	multi-exon	FALSE	canonical	1	20287089	junction_3	4329226.228828837	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	32	310	25.0	0	True	AATAAA	-20
PB.8776.1	chr4	+	3166	2	full-splice_match	USP46-AS1	ENST00000503051.1	1048	2	-31	-2087	-31	2087	multi-exon	FALSE	canonical	1	12287	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-162	False	NA	NA
PB.490.24	chr1	+	7718	6	novel_in_catalog	IFI44L	novel	554	3	NA	NA	1	-415	intron_retention	FALSE	canonical	1	130560	junction_1	142122.4027688809	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	113	1063	95.0	22	True	NA	NA
PB.11145.8	chr8	+	9116	7	novel_in_catalog	SDCBP	novel	556	3	NA	NA	-2	0	intron_retention	FALSE	canonical	1	278688	junction_3	271807.79227342905	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	7270	7998	20.0	-2	True	AATAAA	-19
PB.6611.5	chr2	-	2855	1	genic	KRCC1	novel	NA	NA	NA	NA	-54	-25724	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-12	True	NA	NA
PB.6611.4	chr2	-	4754	1	genic	KRCC1	novel	NA	NA	NA	NA	-133	-23904	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	3710	4021	85.0	9	True	NA	NA
PB.2331.10	chr11	+	3798	1	novel_in_catalog	SC5D	novel	2456	5	NA	NA	172	-8104	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	150	453	233	685	45.0	252	False	ATTAAA	-17
PB.6611.3	chr2	-	1730	4	novel_not_in_catalog	KRCC1	novel	1753	4	NA	NA	-39	-1	any annotated donor/acceptor	FALSE	canonical	1	40430	junction_2	122033.37033232617	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	373	1152	15.0	3	True	AATAAA	-15
PB.6611.2	chr2	-	1791	4	full-splice_match	KRCC1	ENST00000347055.3	1753	4	-39	1	-39	-1	multi-exon	FALSE	canonical	1	103900	junction_3	90397.9497260124	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	434	1213	15.0	3	True	AATAAA	-15
PB.11694.10	chr9	+	1772	13	incomplete-splice_match	RNF20	ENST00000389120.7	3940	20	14	10796	14	-8904	3prime_fragment	FALSE	canonical	1	213414	junction_1	69787.9593421307	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1695	77	1771	60.0	0	True	AATGAA	-20
PB.5289.7	chr17	+	6611	9	novel_in_catalog	PGS1	novel	2201	10	NA	NA	-3	101	intron_retention	FALSE	canonical	1	84345	junction_7	69679.700140065	NA	8	NA	TRUE	NA	NA	NA	C	coding	480	1443	21	1463	20.0	-3	True	AATAAA	-17
PB.5289.6	chr17	+	2201	10	full-splice_match	PGS1	ENST00000262764.10	2201	10	9	-9	0	6	multi-exon	FALSE	canonical	1	169012	junction_7	48387.87517346126	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	18	1688	25.0	0	True	TATAAA	-5
PB.5289.5	chr17	+	2059	9	full-splice_match	PGS1	ENST00000589426.5	2033	9	-17	-9	0	6	multi-exon	FALSE	canonical	1	39929	junction_2	94206.06933837915	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	27	1391	25.0	-9	True	TATAAA	-5
PB.5289.4	chr17	+	2130	9	novel_in_catalog	PGS1	novel	2201	10	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	1	39929	junction_2	84038.48238372333	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	18	1610	25.0	0	True	TATAAA	-12
PB.5289.3	chr17	+	2283	10	novel_in_catalog	PGS1	novel	2201	10	NA	NA	-1	101	combination_of_known_junctions	TRUE	canonical	1	73702	junction_9	83503.83800331545	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	28	1470	20.0	-10	True	AATAAA	-17
PB.5289.2	chr17	+	2256	10	novel_in_catalog	PGS1	novel	2201	10	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	1	73702	junction_9	71679.69988156417	NA	1	NA	TRUE	NA	NA	NA	C	coding	556	1671	23	1693	25.0	-5	True	TATAAA	-5
PB.5289.1	chr17	+	2225	10	novel_in_catalog	PGS1	novel	2201	10	NA	NA	-2	101	combination_of_known_junctions	FALSE	canonical	1	84345	junction_7	66662.58413907133	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	20	1462	20.0	-2	True	AATAAA	-17
PB.9466.9	chr5	+	3531	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	-2	3408	0	1321	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	2	NA	TRUE	NA	NA	NA	C	coding	462	1389	297	1685	65.0	0	True	AAGAAA	-10
PB.5289.9	chr17	+	2170	10	novel_in_catalog	PGS1	novel	2201	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	73702	junction_9	83503.83800331545	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	17	1459	40.0	1	True	AATATA	-20
PB.5289.8	chr17	+	2134	9	novel_in_catalog	PGS1	novel	2201	10	NA	NA	0	101	combination_of_known_junctions	FALSE	canonical	1	18649	junction_7	87359.33575719026	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	5	1672	20.0	13	True	AATAAA	-17
PB.11781.1	chr9	-	4034	7	novel_in_catalog	PSMB7	novel	967	7	NA	NA	2	-3	intron_retention	FALSE	canonical	1	2817209	junction_4	302751.2179417652	NA	0	NA	TRUE	NA	NA	NA	B	coding	241	726	18	743	10.0	-4	True	AATAAA	-23
PB.11189.2	chr8	-	4189	6	novel_not_in_catalog	JPH1	novel	4378	6	NA	NA	-243	-6	any annotated donor/acceptor	FALSE	canonical	1	11458	junction_1	26418.42128515631	NA	4	NA	TRUE	NA	NA	NA	B	coding	661	1986	285	2270	25.0	0	True	AATAAA	-16
PB.3478.1	chr14	-	2750	2	full-splice_match	SIX1	ENST00000645694.1	2726	2	-28	4	-28	-4	multi-exon	FALSE	canonical	1	149973	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	284	855	316	1170	20.0	8968	False	ATTAAA	-15
PB.6718.8	chr2	+	2340	5	novel_in_catalog	RALB	novel	558	4	NA	NA	60	-2	combination_of_known_junctions	FALSE	canonical	1	9543	junction_1	336729.4673669799	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	269	889	10.0	-3061	False	AATAAA	-18
PB.12060.1	chrX	+	2208	13	novel_in_catalog	PORCN	novel	1877	14	NA	NA	10	0	intron_retention	FALSE	canonical	1	35007	junction_1	57980.45769026166	NA	0	NA	TRUE	NA	NA	NA	C	coding	563	1692	187	1878	20.0	-18	True	AATAAA	-15
PB.12060.3	chrX	+	1831	13	full-splice_match	PORCN	ENST00000361988.7	1672	13	-47	-112	-1	0	multi-exon	FALSE	canonical	1	59584	junction_1	53956.09423327194	NA	1	NA	TRUE	NA	NA	NA	C	coding	450	1353	149	1501	20.0	-1	True	AATAAA	-15
PB.12060.2	chrX	+	1866	14	full-splice_match	PORCN	ENST00000355961.8	1848	14	-26	8	10	0	multi-exon	FALSE	canonical	1	12337	junction_7	72114.51336893199	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	166	1536	20.0	-18	True	AATAAA	-15
PB.6718.5	chr2	+	2038	4	novel_in_catalog	RALB	novel	558	4	NA	NA	-5	-10	no_combination_of_known_junctions	FALSE	canonical	1	10049	junction_2	377670.5881593994	NA	0	NA	TRUE	NA	NA	NA	C	coding	46	141	184	324	30.0	-7	True	AATAAA	-10
PB.6718.4	chr2	+	2138	5	full-splice_match	RALB	ENST00000272519.9	2344	5	197	9	80	-9	multi-exon	FALSE	canonical	1	262591	junction_1	236034.10197522305	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	74	694	25.0	24	True	AATAAA	-11
PB.6718.6	chr2	+	2314	6	full-splice_match	RALB	ENST00000431732.5	767	6	3	-1550	3	-8	multi-exon	FALSE	canonical	1	5842	junction_3	371978.40158299514	NA	0	NA	TRUE	NA	NA	NA	C	coding	195	588	282	869	20.0	1	True	AATAAA	-12
PB.9049.5	chr4	+	1950	7	full-splice_match	TMA16	ENST00000358572.9	1978	7	229	-201	2	201	multi-exon	FALSE	canonical	1	151704	junction_2	84445.1207346457	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	113	724	35.0	0	True	ATTAAA	-20
PB.9049.4	chr4	+	1799	7	novel_in_catalog	TMA16	novel	933	7	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	17869	junction_1	82006.04674588874	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	AATAAA	-19
PB.3076.1	chr13	-	2952	3	novel_not_in_catalog	PLUT	novel	2518	5	NA	NA	-5036	-28071	any annotated donor/acceptor	FALSE	canonical	1	17	junction_2	27.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-5093	False	AAAAAG	-8
PB.6682.1	chr2	+	2079	14	full-splice_match	CCDC138	ENST00000412964.6	2250	14	-17	188	-17	-186	multi-exon	FALSE	canonical	1	14010	junction_13	26050.29875397973	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	84	1817	55.0	-31	True	AATAAA	-17
PB.1774.2	chr11	+	3123	19	novel_not_in_catalog	RRM1	novel	549	3	NA	NA	-18	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	258078.5921222496	NA	4	1	TRUE	NA	NA	NA	C	coding	491	1476	233	1708	35.0	-24	True	AATAAA	-13
PB.1774.3	chr11	+	3056	19	full-splice_match	RRM1	ENST00000300738.9	3076	19	19	1	-15	0	multi-exon	FALSE	canonical	1	604606	junction_1	161128.42603646216	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	186	2564	30.0	-12	True	AATAAA	-19
PB.5750.2	chr19	-	3105	23	novel_in_catalog	AC010422.3	novel	838	5	NA	NA	-18347	-2680	no_combination_of_known_junctions	TRUE	canonical	1	28378	junction_16	298181.56193712656	NA	0	NA	TRUE	NA	NA	NA	B	coding	572	1719	1278	2996	10.0	-3	True	ATTAAA	-21
PB.1774.1	chr11	+	2764	19	full-splice_match	RRM1	ENST00000300738.9	3076	19	26	286	-8	144	multi-exon	FALSE	canonical	1	604606	junction_1	161128.42603646216	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	179	2557	85.0	-5	True	TTTAAA	-38
PB.1774.6	chr11	+	1786	13	incomplete-splice_match	RRM1	ENST00000300738.9	3076	19	-3	11934	1	-7	3prime_fragment	FALSE	canonical	1	604606	junction_1	166905.15783478404	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	208	1683	35.0	1	True	AATAAA	-11
PB.1774.7	chr11	+	1669	13	incomplete-splice_match	RRM1	ENST00000300738.9	3076	19	-2	12050	2	9	3prime_fragment	FALSE	canonical	1	604606	junction_1	166905.15783478404	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1461	207	1667	40.0	2	True	AATAAA	-27
PB.1774.4	chr11	+	2578	18	novel_in_catalog	RRM1	novel	549	3	NA	NA	0	144	no_combination_of_known_junctions	FALSE	canonical	1	6876	junction_13	263931.88008946	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	215	2371	85.0	-6	True	TTTAAA	-38
PB.1774.5	chr11	+	2296	19	full-splice_match	RRM1	ENST00000300738.9	3076	19	199	581	156	-151	multi-exon	FALSE	canonical	1	604606	junction_1	161128.42603646216	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2289	6	2294	60.0	119	False	NA	NA
PB.5750.8	chr19	-	3020	23	novel_in_catalog	AC010422.3	novel	838	5	NA	NA	-18337	-2682	no_combination_of_known_junctions	TRUE	canonical	1	1844	junction_2	296182.10515271896	NA	0	NA	TRUE	NA	NA	NA	B	coding	959	2880	34	2913	15.0	7	True	ATTAAA	-19
PB.9049.1	chr4	+	1748	7	full-splice_match	TMA16	ENST00000358572.9	1978	7	229	1	2	-1	multi-exon	FALSE	canonical	1	151704	junction_2	84445.1207346457	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	113	724	25.0	0	True	AATAAA	-19
PB.1774.8	chr11	+	2822	18	novel_in_catalog	RRM1	novel	549	3	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	6876	junction_13	263931.88008946	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	179	2335	40.0	-5	True	AATAAA	-14
PB.11736.10	chr9	+	2707	14	novel_not_in_catalog	PRPF4	novel	3212	14	NA	NA	30	2	any annotated donor/acceptor	FALSE	canonical	1	15073	junction_11	119765.2439053834	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	73	1230	40.0	14	True	ATTAAA	-24
PB.9703.2	chr6	-	1612	4	full-splice_match	TUBB2A	ENST00000333628.3	1595	4	-18	1	-18	-1	multi-exon	FALSE	canonical	1	450825	junction_3	673118.6453780311	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	82	1419	20.0	-1	True	AATAAA	-14
PB.11736.12	chr9	+	3279	13	novel_in_catalog	PRPF4	novel	3212	14	NA	NA	33	-2	intron_retention	FALSE	canonical	1	77897	junction_1	106979.31975854025	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	1035	2036	25.0	17	True	TATAAA	-36
PB.11736.13	chr9	+	3130	13	novel_not_in_catalog	PRPF4	novel	3212	14	NA	NA	33	-2	intron_retention	FALSE	canonical	1	4973	junction_5	152914.51010205015	NA	2	NA	TRUE	NA	NA	NA	C	coding	278	837	1180	2016	50.0	17	True	ATTAAA	-20
PB.8180.3	chr3	-	3659	13	novel_in_catalog	TKT	novel	3010	14	NA	NA	-3	0	intron_retention	FALSE	canonical	1	3680343	junction_8	659709.6579967911	NA	0	NA	TRUE	NA	NA	NA	C	coding	358	1077	2484	3560	45.0	-4	True	AATATA	-10
PB.635.23	chr1	-	3465	18	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	1	-20	no_combination_of_known_junctions	FALSE	canonical	1	11908	junction_9	1592094.8770468542	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	466	2628	90.0	619	False	NA	NA
PB.9874.42	chr6	-	3709	25	novel_not_in_catalog	BAG6	novel	488	2	NA	NA	-2	-15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	545348.2626499616	NA	2	NA	TRUE	NA	NA	NA	C	coding	1126	3381	242	3622	10.0	10	True	AATAAA	-15
PB.9874.43	chr6	-	3818	26	novel_in_catalog	BAG6	novel	488	2	NA	NA	-7	-39	combination_of_known_junctions	FALSE	canonical	1	128183	junction_13	574888.5694102467	NA	2	1	TRUE	NA	NA	NA	C	coding	1161	3486	270	3755	50.0	5	True	NA	NA
PB.9874.41	chr6	-	3874	26	novel_not_in_catalog	BAG6	novel	488	2	NA	NA	3	-15	any annotated donor/acceptor	FALSE	canonical	1	38470	junction_14	558015.0735930721	NA	1	NA	TRUE	NA	NA	NA	C	coding	1173	3522	266	3787	10.0	8093	False	AATAAA	-15
PB.7088.10	chr2	+	2324	15	full-splice_match	MLPH	ENST00000338530.8	2332	15	10	-2	10	0	multi-exon	FALSE	canonical	1	267436	junction_4	129740.4462382766	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	202	1920	20.0	10	True	AAAAAG	-23
PB.7088.11	chr2	+	2643	4	full-splice_match	MLPH	ENST00000469619.5	1153	4	-10	-1480	-10	1480	multi-exon	FALSE	canonical	1	284753	junction_1	41152.308910517604	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	198	689	90.0	14	True	AAAACA	-44
PB.7088.12	chr2	+	3544	16	novel_in_catalog	MLPH	novel	744	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	81928	junction_12	173502.62277010878	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	192	1847	25.0	20	True	AAAAAG	-20
PB.11413.11	chr8	+	2597	4	full-splice_match	ZNF7	ENST00000532382.5	855	4	6	-1748	1	1	multi-exon	FALSE	canonical	1	83758	junction_2	41111.249655322106	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	419	2542	25.0	1	True	AATAAA	-20
PB.5777.1	chr19	+	2857	1	antisense	novelGene_C19orf67_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-9562	False	NA	NA
PB.630.1	chr1	+	8046	17	novel_not_in_catalog	HIPK1	novel	4112	16	NA	NA	-84	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	114424.6009987991	NA	0	NA	TRUE	NA	NA	NA	A	coding	1210	3633	127	3759	15.0	-24	True	AATAAA	-17
PB.4929.10	chr17	-	1675	13	incomplete-splice_match	DDX52	ENST00000617633.4	6362	15	18	9990	0	0	3prime_fragment	FALSE	canonical	1	228023	junction_12	48520.04779097903	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1647	27	1673	30.0	-7	True	CATAAA	-22
PB.9539.1	chr5	-	3215	2	antisense	novelGene_ARHGAP26_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	879	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	100	303	768	1070	20.0	NA	False	NA	NA
PB.9539.3	chr5	-	2797	3	antisense	novelGene_ARHGAP26_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	831	junction_2	36.5	NA	0	NA	FALSE	NA	NA	NA	B	coding	100	303	673	975	20.0	NA	False	NA	NA
PB.9539.2	chr5	-	3119	2	antisense	novelGene_ARHGAP26_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	831	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	100	303	673	975	20.0	NA	False	NA	NA
PB.607.2	chr1	+	4239	7	novel_in_catalog	CD53	novel	1569	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	179348	junction_1	525872.3431687633	NA	2	1	TRUE	NA	NA	NA	C	coding	173	522	183	704	45.0	-22	True	AATAAA	-18
PB.12385.19	chrY	+	4391	17	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	1	22408	junction_1	88657.93872131531	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	60	2033	10.0	0	True	AATAAA	-16
PB.12385.18	chrY	+	4474	16	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-18	0	intron_retention	FALSE	canonical	1	22408	junction_1	91309.1172853085	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	1117	2118	10.0	-1	True	AATAAA	-14
PB.9100.10	chr4	-	1709	5	full-splice_match	SORBS2	ENST00000476311.5	571	5	-579	-559	-2	154	multi-exon	FALSE	canonical	1	57110	junction_3	100011.52713687558	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	666	1085	75.0	-3	True	TTTAAA	-32
PB.12385.15	chrY	+	4303	16	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-30	0	no_combination_of_known_junctions	FALSE	canonical	1	6943	junction_8	106265.87190681473	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	73	1947	10.0	3	True	AATAAA	-14
PB.12385.14	chrY	+	2196	17	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-34	-271	combination_of_known_junctions	FALSE	canonical	1	22408	junction_1	88657.93872131531	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	77	2050	70.0	-1	True	NA	NA
PB.12385.17	chrY	+	4327	17	novel_not_in_catalog	DDX3Y	novel	2709	18	NA	NA	-22	2	any annotated donor/acceptor	FALSE	canonical	1	22408	junction_1	100097.89183248863	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	65	1969	10.0	-5	True	AATAAA	-16
PB.12385.16	chrY	+	4632	16	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-26	0	intron_retention	FALSE	canonical	1	22408	junction_1	91262.76803930262	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	1275	2276	10.0	-9049	False	AATAAA	-14
PB.12385.11	chrY	+	4408	17	full-splice_match	DDX3Y	ENST00000336079.7	4445	17	37	0	19	0	multi-exon	FALSE	canonical	1	114102	junction_10	72203.45226932972	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	70	2052	10.0	-14	True	AATAAA	-14
PB.12385.10	chrY	+	4806	14	novel_not_in_catalog	DDX3Y	novel	2709	18	NA	NA	12	0	intron_retention	FALSE	canonical	1	728	junction_10	98139.35445974335	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	77	517	10.0	-21	True	AATAAA	-14
PB.12385.13	chrY	+	4724	15	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	-34	0	intron_retention	FALSE	canonical	1	22408	junction_1	94158.24085334719	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	1367	2368	10.0	-1	True	AATAAA	-14
PB.12385.12	chrY	+	4488	16	novel_in_catalog	DDX3Y	novel	2709	18	NA	NA	19	-4	intron_retention	FALSE	canonical	1	114102	junction_9	73903.34301366587	NA	2	NA	TRUE	NA	NA	NA	C	coding	291	876	70	945	10.0	-14	True	AATAAA	-10
PB.7400.6	chr20	+	2744	12	full-splice_match	SLCO4A1	ENST00000217159.5	2776	12	30	2	30	0	multi-exon	FALSE	canonical	1	71562	junction_1	45620.126464221576	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	176	2344	5.0	4	True	AATATA	-19
PB.9100.12	chr4	-	1752	6	full-splice_match	SORBS2	ENST00000492810.5	780	6	-558	-414	0	154	multi-exon	FALSE	canonical	1	86559	junction_1	121214.16859591952	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	664	1128	75.0	-1	True	TTTAAA	-32
PB.841.5	chr1	+	3205	13	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	12	-2	any annotated donor/acceptor	FALSE	canonical	1	295	junction_9	466384.30355527945	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	771	2960	30.0	4	True	AATAAA	-19
PB.3114.1	chr13	+	2619	6	full-splice_match	UFM1	ENST00000379649.5	846	6	3	-1776	3	-718	multi-exon	FALSE	canonical	1	19972	junction_2	228602.42515564003	NA	3	NA	TRUE	NA	NA	NA	C	coding	103	312	185	496	25.0	0	True	ATTAAA	-37
PB.8180.1	chr3	-	2859	15	full-splice_match	TKT	ENST00000423525.6	2831	15	-22	-6	0	-1	multi-exon	FALSE	canonical	1	116573	junction_1	1321369.1155194826	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	81	1952	25.0	-1	True	AATAAA	-19
PB.7400.2	chr20	+	3162	5	incomplete-splice_match	SLCO4A1	ENST00000217159.5	2776	12	24	9260	24	-7083	3prime_fragment	FALSE	canonical	1	71562	junction_1	45825.76140393087	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	182	1306	30.0	-2	True	AATAAA	-6
PB.5325.1	chr17	-	2291	3	novel_not_in_catalog	ARL16	novel	1227	5	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	327965.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	126	381	1423	1803	80.0	0	True	NA	NA
PB.4368.2	chr16	+	2320	3	full-splice_match	ZNF48	ENST00000613509.1	3339	3	321	698	14	-518	multi-exon	FALSE	canonical	1	24641	junction_1	26651.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	162	2018	15.0	0	True	NA	NA
PB.4368.1	chr16	+	3024	3	full-splice_match	ZNF48	ENST00000613509.1	3339	3	321	-6	14	5	multi-exon	FALSE	canonical	1	24641	junction_1	26651.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	162	2018	10.0	0	True	AATAAA	-23
PB.9957.9	chr6	+	3573	5	novel_in_catalog	SRSF3	novel	595	5	NA	NA	-5	1	intron_retention	FALSE	canonical	1	845209	junction_4	888757.9109029073	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	123	509	25.0	0	True	ATTAAA	-19
PB.9957.8	chr6	+	4533	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-6	-305	-5	305	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	3	NA	TRUE	NA	NA	NA	C	coding	164	495	123	617	40.0	0	True	ATTAAA	-9
PB.11883.1	chr9	-	2306	8	full-splice_match	REXO4	ENST00000371942.7	2360	8	52	2	-15	-2	multi-exon	FALSE	canonical	1	44397	junction_7	134153.0224593527	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	149	1417	20.0	-10	True	AATAAA	-18
PB.9957.5	chr6	+	1561	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-6	2667	-5	155	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	123	617	25.0	0	True	AATAAA	-30
PB.9957.4	chr6	+	4229	5	novel_in_catalog	SRSF3	novel	595	5	NA	NA	-6	654	intron_retention	FALSE	canonical	1	845209	junction_4	888757.9109029073	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	124	510	15.0	-1	True	ATTAAA	-17
PB.9957.7	chr6	+	923	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-6	3305	-5	98	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	123	617	20.0	0	True	AATAAA	-19
PB.7400.1	chr20	+	2198	13	novel_not_in_catalog	SLCO4A1	novel	2776	12	NA	NA	-2	-45	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	61340.87269665716	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	351	1982	25.0	-60	False	CATAAA	-20
PB.9957.1	chr6	+	2879	6	novel_in_catalog	SRSF3	novel	595	5	NA	NA	-28	143	intron_retention	FALSE	canonical	1	425361	junction_3	994825.0003442817	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	160	546	30.0	-8767	False	AATAAA	-18
PB.9957.3	chr6	+	1868	7	full-splice_match	SRSF3	ENST00000477442.6	1095	7	-31	-742	7	4	multi-exon	FALSE	canonical	1	425361	junction_4	994781.9194921429	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	125	499	25.0	-2	True	ATTAAA	-24
PB.9957.2	chr6	+	2945	6	full-splice_match	SRSF3	ENST00000373715.10	4222	6	-11	1288	4	-1288	multi-exon	FALSE	canonical	1	845209	junction_5	806064.4367062971	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	128	622	30.0	-5	True	AAGAAA	-28
PB.7256.5	chr20	-	4097	17	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	intron_retention	FALSE	canonical	1	190024	junction_9	207171.7347049359	NA	14	1	TRUE	NA	NA	NA	C	coding	780	2343	27	2369	35.0	-1	True	AATAAA	-36
PB.7256.4	chr20	-	4236	18	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	5	-8	intron_retention	FALSE	canonical	1	379214	junction_17	187170.2190134326	NA	1	1	TRUE	NA	NA	NA	C	coding	532	1599	86	1684	35.0	-13	False	AATAAA	-36
PB.5767.8	chr19	-	2217	16	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	1	0	intron_retention	FALSE	canonical	1	85906	junction_15	159559.09960156525	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	228	1826	5.0	-4	True	AATAAA	-20
PB.5767.9	chr19	-	2205	16	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	0	0	intron_retention	TRUE	canonical	1	68552	junction_10	173793.54935524316	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	891	1814	5.0	-5	True	AATAAA	-20
PB.7256.1	chr20	-	3135	19	full-splice_match	TRPC4AP	ENST00000252015.2	3226	19	64	27	0	-27	multi-exon	FALSE	canonical	1	379214	junction_18	182848.88964908788	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	27	2420	40.0	-1	True	AATAAA	-17
PB.7256.3	chr20	-	2690	20	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	15148	junction_1	245916.31611806553	NA	0	NA	TRUE	NA	NA	NA	C	coding	797	2394	27	2420	30.0	-1	True	AATAAA	-37
PB.7256.2	chr20	-	3017	17	novel_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-7	no_combination_of_known_junctions	FALSE	canonical	1	2720	junction_14	292147.58472278935	NA	41	6	TRUE	NA	NA	NA	C	coding	751	2256	27	2282	30.0	-1	True	AATAAA	-37
PB.5767.2	chr19	-	2145	15	novel_not_in_catalog	TRMT1	novel	2263	16	NA	NA	0	-1	intron_retention	FALSE	canonical	1	17805	junction_13	200163.90808194608	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	773	1750	10.0	-5	True	AATAAA	-24
PB.5767.3	chr19	-	2453	14	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	0	-2	intron_retention	FALSE	canonical	1	85906	junction_13	166654.52339147666	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	229	1173	5.0	-5	True	AATAAA	-23
PB.5767.1	chr19	-	2137	17	full-splice_match	TRMT1	ENST00000357720.8	2142	17	5	0	-4	0	multi-exon	FALSE	canonical	1	85906	junction_16	154645.72935336552	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	233	2104	10.0	-9	True	AATAAA	-25
PB.5767.6	chr19	-	2295	15	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	-1	0	intron_retention	FALSE	canonical	1	85906	junction_14	164117.51680758133	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	230	1231	5.0	-6	True	AATAAA	-20
PB.7256.8	chr20	-	3381	19	novel_not_in_catalog	TRPC4AP	novel	3138	19	NA	NA	0	-8	any annotated donor/acceptor	FALSE	canonical	1	12119	junction_6	251544.53026300858	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	27	1661	35.0	-1	True	AATAAA	-36
PB.5767.4	chr19	-	2050	16	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	85906	junction_15	172094.49397230064	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	237	2021	5.0	-13	True	AATAAA	-21
PB.5767.5	chr19	-	2361	15	novel_in_catalog	TRMT1	novel	2263	16	NA	NA	-1	0	intron_retention	FALSE	canonical	1	85906	junction_14	160966.7259233715	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	230	1174	5.0	-6	True	AATAAA	-20
PB.2661.4	chr12	+	2554	23	novel_in_catalog	DGKA	novel	556	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	8681	junction_14	147822.56006238953	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	169	2301	30.0	-7376	False	AATAAA	-31
PB.2661.5	chr12	+	2617	24	novel_in_catalog	DGKA	novel	556	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	55547	junction_1	129053.14626646691	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	157	2364	30.0	-14	True	AATAAA	-31
PB.2661.6	chr12	+	2734	24	full-splice_match	DGKA	ENST00000394147.5	2770	24	40	-4	4	-2	multi-exon	FALSE	canonical	1	13723	junction_1	133741.5090883765	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	270	2477	20.0	5	True	AATAAA	-35
PB.11145.5	chr8	+	3595	10	novel_in_catalog	SDCBP	novel	556	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	12413	junction_2	383647.4547033005	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	1560	2477	20.0	-10	True	AATAAA	-19
PB.2661.1	chr12	+	2734	24	full-splice_match	DGKA	ENST00000331886.9	2909	24	181	-6	-9	0	multi-exon	FALSE	canonical	1	94186	junction_1	125083.01532297394	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	274	2481	30.0	-9	True	AATAAA	-31
PB.2661.2	chr12	+	2767	24	novel_not_in_catalog	DGKA	novel	556	4	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	945	junction_22	131617.26824272962	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	273	2339	30.0	-8	True	AATAAA	-31
PB.2661.3	chr12	+	3079	23	novel_in_catalog	DGKA	novel	556	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	94186	junction_1	126563.05632342173	NA	0	NA	TRUE	NA	NA	NA	C	coding	853	2562	265	2826	30.0	0	True	AATAAA	-31
PB.11869.1	chr9	+	3826	5	full-splice_match	GTF3C4	ENST00000372146.4	9043	5	702	4515	702	-4515	multi-exon	FALSE	canonical	1	204050	junction_1	22469.09113649237	NA	2	NA	TRUE	NA	NA	NA	C	coding	773	2322	10	2331	90.0	248	False	NA	NA
PB.10154.3	chr6	+	2854	21	novel_not_in_catalog	FIG4	novel	3011	23	NA	NA	-38	200	any annotated donor/acceptor	FALSE	canonical	1	2027	junction_19	50768.83122179887	NA	1	NA	TRUE	NA	NA	NA	C	coding	817	2454	163	2616	25.0	-38	True	AATAAA	-19
PB.11869.2	chr9	+	3658	5	full-splice_match	GTF3C4	ENST00000372146.4	9043	5	711	4674	711	-4674	multi-exon	FALSE	canonical	1	204050	junction_1	22469.09113649237	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	1	2322	50.0	257	False	NA	NA
PB.6606.3	chr2	+	748	4	full-splice_match	MRPL35	ENST00000337109.8	3727	4	6	2973	0	-224	multi-exon	FALSE	canonical	1	434181	junction_1	18074.395413278853	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	29	595	30.0	0	True	ATTAAA	-22
PB.10154.2	chr6	+	3025	23	full-splice_match	FIG4	ENST00000230124.7	3011	23	-15	1	-15	-1	multi-exon	FALSE	canonical	1	109095	junction_1	31235.885253374578	NA	0	NA	TRUE	NA	NA	NA	C	coding	907	2724	140	2863	0.0	-15	True	AATAAA	-15
PB.1321.1	chr10	+	3297	13	full-splice_match	CACNB2	ENST00000377315.5	2296	13	402	-1403	-46	18	multi-exon	TRUE	canonical	1	16535	junction_1	11289.998660318786	NA	7	1	TRUE	NA	NA	NA	A	coding	612	1839	56	1894	5.0	1	True	AATAAA	-36
PB.235.1	chr1	-	2161	10	full-splice_match	MECR	ENST00000373791.7	2416	10	164	91	131	-91	multi-exon	FALSE	canonical	1	32843	junction_9	85952.05785024207	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	210	1103	80.0	5703	False	NA	NA
PB.6606.2	chr2	+	3169	4	full-splice_match	MRPL35	ENST00000337109.8	3727	4	0	558	0	398	multi-exon	FALSE	canonical	1	434181	junction_1	18074.395413278853	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	35	601	30.0	-6	True	AATAAA	-22
PB.8277.9	chr3	+	2924	12	full-splice_match	NFKBIZ	ENST00000326172.9	3923	12	0	999	0	484	multi-exon	FALSE	canonical	1	108609	junction_1	100738.41896181229	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	116	2272	20.0	0	True	TTTAAA	-19
PB.10818.8	chr7	-	4218	7	novel_not_in_catalog	ZNF800	novel	1478	2	NA	NA	0	-55	intron_retention	FALSE	canonical	1	3015	junction_4	68064.61934237363	NA	28	NA	TRUE	NA	NA	NA	C	coding	567	1704	1055	2758	35.0	-15	True	AATAAA	-23
PB.10818.9	chr7	-	2454	5	novel_not_in_catalog	ZNF800	novel	1478	2	NA	NA	10	-64	any annotated donor/acceptor	FALSE	canonical	1	2981	junction_2	52996.21861274633	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	708	1016	25.0	-5	True	AATAAA	-14
PB.10818.6	chr7	-	3675	6	full-splice_match	ZNF800	ENST00000265827.7	4203	6	474	54	-102	-54	multi-exon	FALSE	canonical	1	76656	junction_5	38787.44007742712	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	220	2214	35.0	14	True	AATAAA	-24
PB.6606.5	chr2	+	2753	4	full-splice_match	MRPL35	ENST00000337109.8	3727	4	26	948	20	8	multi-exon	FALSE	canonical	1	434181	junction_1	18074.395413278853	NA	10	NA	TRUE	NA	NA	NA	C	coding	188	567	9	575	35.0	20	True	AATAAA	-30
PB.10818.4	chr7	-	4062	5	novel_in_catalog	ZNF800	novel	1478	2	NA	NA	-8	-53	intron_retention	FALSE	canonical	1	13176	junction_3	64745.95437747443	NA	2	1	TRUE	NA	NA	NA	C	coding	632	1899	702	2600	30.0	1	True	AATAAA	-25
PB.10818.5	chr7	-	5216	5	novel_in_catalog	ZNF800	novel	1478	2	NA	NA	-117	-55	intron_retention	FALSE	canonical	1	76656	junction_4	41447.29346637124	NA	2	NA	TRUE	NA	NA	NA	C	coding	665	1998	235	2232	35.0	-1	True	AATAAA	-23
PB.10818.2	chr7	-	4383	5	novel_in_catalog	ZNF800	novel	1478	2	NA	NA	4	0	intron_retention	FALSE	canonical	1	13176	junction_3	64745.95437747443	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	714	2612	20.0	-11	True	ATTAAA	-19
PB.10818.1	chr7	-	4482	6	full-splice_match	ZNF800	ENST00000265827.7	4203	6	-23	-256	1	0	multi-exon	FALSE	canonical	1	76656	junction_5	38787.44007742712	NA	8	1	TRUE	NA	NA	NA	C	coding	664	1995	717	2711	20.0	-14	True	ATTAAA	-19
PB.11883.3	chr9	-	3012	7	novel_in_catalog	REXO4	novel	1899	6	NA	NA	-13	-2	intron_retention	TRUE	canonical	1	10088	junction_6	152391.8071034332	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	380	1183	20.0	-8	True	AATAAA	-18
PB.10434.21	chr7	+	2351	9	novel_in_catalog	GPNMB	novel	793	6	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	92	junction_1	280078.0486404638	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	84	1469	30.0	0	True	AATAAA	-15
PB.8277.6	chr3	+	4633	11	novel_in_catalog	NFKBIZ	novel	1338	4	NA	NA	0	-4	intron_retention	FALSE	canonical	1	108609	junction_1	103189.47767868583	NA	8	NA	TRUE	NA	NA	NA	C	coding	446	1341	116	1456	30.0	0	True	AATAAA	-11
PB.8520.7	chr3	+	3861	25	novel_in_catalog	FNDC3B	novel	946	4	NA	NA	-13	194	no_combination_of_known_junctions	FALSE	canonical	1	2851	junction_1	89609.67467833257	NA	2	NA	TRUE	NA	NA	NA	C	coding	1135	3408	254	3661	85.0	-4	True	NA	NA
PB.8277.5	chr3	+	5198	10	novel_in_catalog	NFKBIZ	novel	1338	4	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	108609	junction_1	107047.81329969759	NA	3	NA	TRUE	NA	NA	NA	C	coding	618	1857	117	1973	30.0	-1	True	AATAAA	-11
PB.8277.4	chr3	+	3919	12	full-splice_match	NFKBIZ	ENST00000326172.9	3923	12	0	4	0	-4	multi-exon	FALSE	canonical	1	108609	junction_1	100738.41896181229	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	116	2272	30.0	0	True	AATAAA	-11
PB.1359.32	chr10	-	4169	8	novel_in_catalog	KIF5B	novel	5877	26	NA	NA	20	-17574	intron_retention	FALSE	canonical	1	730493	junction_7	222999.42178253946	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	439	789	70.0	13	True	NA	NA
PB.1359.31	chr10	-	1460	11	incomplete-splice_match	KIF5B	ENST00000302418.4	5877	26	18	25771	18	-17574	3prime_fragment	FALSE	canonical	1	730493	junction_10	200566.18077185893	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1020	441	1460	70.0	11	True	NA	NA
PB.1359.30	chr10	-	1698	12	novel_not_in_catalog	KIF5B	novel	5877	26	NA	NA	7	-17561	any annotated donor/acceptor	FALSE	canonical	1	4752	junction_11	434532.95612018363	NA	0	NA	TRUE	NA	NA	NA	C	coding	250	750	948	1697	85.0	0	True	NA	NA
PB.8277.3	chr3	+	3707	12	novel_in_catalog	NFKBIZ	novel	1338	4	NA	NA	0	-4	intron_retention	FALSE	canonical	1	2784	junction_1	127099.52526541635	NA	1	NA	TRUE	NA	NA	NA	C	coding	618	1857	204	2060	30.0	3	True	AATAAA	-11
PB.7856.1	chr22	-	1808	2	novel_not_in_catalog	NUP50-DT	novel	2076	3	NA	NA	8	-26612	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.11497.5	chr9	-	1807	7	full-splice_match	APTX	ENST00000476858.5	1068	7	23	-762	1	2	multi-exon	FALSE	canonical	1	48804	junction_5	167696.86608149705	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	15	923	10.0	9	True	AATAAA	-16
PB.5508.4	chr18	-	7188	3	full-splice_match	BCL2	ENST00000333681.4	3209	3	-291	-3688	51	-1	multi-exon	FALSE	canonical	1	122770	junction_2	5243.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	1191	1910	10.0	-23	True	AATAAA	-18
PB.11883.2	chr9	-	3191	7	novel_in_catalog	REXO4	novel	1899	6	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	44397	junction_6	142407.8499810394	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	148	1362	20.0	-9	True	AATAAA	-18
PB.10434.20	chr7	+	2860	12	novel_not_in_catalog	GPNMB	novel	793	6	NA	NA	1	14	any annotated donor/acceptor	FALSE	canonical	1	49	junction_6	302425.1632626049	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	84	1247	25.0	0	True	AATAAA	-31
PB.5508.7	chr18	-	5618	2	novel_not_in_catalog	BCL2	novel	7461	2	NA	NA	3589	-4	any annotated donor/acceptor	FALSE	canonical	1	14960	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	112	339	1395	1733	15.0	-1	True	AATAAA	-15
PB.1059.3	chr1	-	3379	12	full-splice_match	DSTYK	ENST00000367161.7	7739	12	-23	4383	-23	-4383	multi-exon	FALSE	canonical	1	22348	junction_1	33892.73258603916	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	55	2709	80.0	112	False	NA	NA
PB.7935.1	chr3	+	4642	8	full-splice_match	TATDN2	ENST00000287652.8	5342	8	700	0	-189	0	multi-exon	FALSE	canonical	1	185617	junction_7	60120.703273684754	NA	1	NA	TRUE	NA	NA	NA	A	coding	761	2286	352	2637	15.0	33	False	AATAAA	-19
PB.11145.9	chr8	+	2157	10	novel_not_in_catalog	SDCBP	novel	556	3	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	1561	junction_2	386887.32995253603	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	143	1039	20.0	-2	True	AATAAA	-19
PB.2536.3	chr12	+	4129	17	full-splice_match	FGD4	ENST00000427716.6	8242	17	3	4110	2	421	multi-exon	FALSE	canonical	1	15254	junction_1	31792.570765370543	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	422	2722	35.0	0	True	ATTAAA	-25
PB.2536.2	chr12	+	2930	17	full-splice_match	FGD4	ENST00000427716.6	8242	17	0	5312	0	1	multi-exon	FALSE	canonical	1	15254	junction_1	31792.570765370543	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	425	2725	30.0	-3	True	GATAAA	-16
PB.2536.1	chr12	+	2301	15	incomplete-splice_match	FGD4	ENST00000427716.6	8242	17	-3	12389	0	-5268	3prime_fragment	FALSE	canonical	1	15254	junction_1	33589.53992286277	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1872	428	2299	75.0	-6	True	NA	NA
PB.2536.6	chr12	+	2290	15	incomplete-splice_match	FGD4	ENST00000525053.5	2925	17	3	7077	3	-5269	3prime_fragment	FALSE	canonical	1	21891	junction_1	32538.174849407464	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2133	157	2289	75.0	5	True	NA	NA
PB.2536.5	chr12	+	7074	17	full-splice_match	FGD4	ENST00000427716.6	8242	17	6	1162	-4	137	multi-exon	FALSE	canonical	1	15254	junction_1	31792.570765370543	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	419	2719	80.0	3	True	NA	NA
PB.2536.4	chr12	+	2937	18	novel_in_catalog	FGD4	novel	2977	17	NA	NA	2	137	no_combination_of_known_junctions	FALSE	canonical	1	5843	junction_17	36638.9868600578	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	422	2674	80.0	0	True	NA	NA
PB.2683.1	chr12	-	2391	18	full-splice_match	GLS2	ENST00000311966.8	2623	18	230	2	-15	0	multi-exon	FALSE	canonical	1	42148	junction_17	20487.610875455517	NA	0	NA	TRUE	NA	NA	NA	A	coding	602	1809	50	1858	25.0	-7	True	AATAAA	-16
PB.2683.2	chr12	-	2401	1	novel_in_catalog	AC097104.1	novel	2246	4	NA	NA	12864	-23206	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-6869	False	NA	NA
PB.11206.2	chr8	-	4388	9	full-splice_match	PAG1	ENST00000220597.4	10744	9	-9	6365	-9	-3884	multi-exon	FALSE	canonical	1	47562	junction_8	30823.829392817173	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	721	2019	100.0	38	False	AAAAAG	-29
PB.5825.3	chr19	+	2932	28	novel_in_catalog	FCHO1	novel	3214	29	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	4436	junction_19	52662.97631890389	NA	5	1	TRUE	NA	NA	NA	B	coding	797	2394	284	2677	20.0	-38	True	AATAAA	-37
PB.5825.2	chr19	+	3202	29	novel_not_in_catalog	FCHO1	novel	3214	29	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	49465.27159248307	NA	7	NA	TRUE	NA	NA	NA	B	coding	889	2670	272	2941	20.0	-38	True	AATAAA	-43
PB.5825.1	chr19	+	3282	29	novel_in_catalog	FCHO1	novel	3214	29	NA	NA	-1	-2	combination_of_known_junctions	TRUE	canonical	1	16856	junction_2	48820.011018400386	NA	3	NA	TRUE	NA	NA	NA	B	coding	889	2670	359	3028	20.0	-12	True	AATAAA	-36
PB.6025.1	chr19	-	2255	3	novel_in_catalog	RABAC1	novel	653	5	NA	NA	15	0	intron_retention	FALSE	canonical	1	1571597	junction_1	477991.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	108	324	1932	2255	30.0	9509	False	AATAAA	-23
PB.11543.2	chr9	+	2521	8	novel_in_catalog	ZCCHC7	novel	2619	9	NA	NA	-31	0	no_combination_of_known_junctions	FALSE	canonical	1	3273	junction_3	86890.53292129666	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	141	1643	35.0	0	True	AATAAA	-13
PB.11206.1	chr8	-	6174	10	novel_in_catalog	PAG1	novel	10744	9	NA	NA	-47	-3	combination_of_known_junctions	FALSE	canonical	1	4640	junction_1	40589.72595906628	NA	3	NA	TRUE	NA	NA	NA	C	coding	432	1299	759	2057	40.0	0	True	AATAAA	-15
PB.10822.1	chr7	-	2277	1	antisense	novelGene_SND1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	AATACA	-24
PB.470.34	chr1	+	3445	1	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	1023	-2536	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-7966	False	NA	NA
PB.470.31	chr1	+	4507	8	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	4	-5586	intron_retention	FALSE	canonical	1	358272	junction_2	462340.72773866507	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	351	4155	4505	50.0	-7	True	NA	NA
PB.470.30	chr1	+	5183	11	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	2	-70	intron_retention	FALSE	canonical	1	826266	junction_2	443423.89155709685	NA	4	NA	TRUE	NA	NA	NA	C	coding	330	990	4194	5183	75.0	-9	True	NA	NA
PB.470.33	chr1	+	5831	12	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	1	-12	intron_retention	FALSE	canonical	1	358272	junction_2	537780.657967217	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	4147	5031	85.0	1	True	NA	NA
PB.470.32	chr1	+	1368	1	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	1	-5879	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	AATAAA	-18
PB.2693.3	chr12	+	2827	6	novel_in_catalog	NAB2	novel	2711	7	NA	NA	18	0	intron_retention	FALSE	canonical	1	126989	junction_1	123421.87182084058	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	161	1255	20.0	-2	True	AATAAA	-20
PB.4442.4	chr16	+	1891	8	novel_not_in_catalog	HERPUD1	novel	2946	8	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	4612	junction_3	683703.344274789	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	422	1300	20.0	1	True	AATAAA	-22
PB.2693.1	chr12	+	2304	6	full-splice_match	NAB2	ENST00000342556.6	2318	6	14	0	14	0	multi-exon	FALSE	canonical	1	40611	junction_5	176814.30545020956	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	165	1550	20.0	-6	True	AATAAA	-20
PB.4442.6	chr16	+	2054	2	full-splice_match	HERPUD1	ENST00000562914.1	570	2	2	-1486	2	-373	multi-exon	FALSE	canonical	1	841943	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	83	252	102	353	75.0	2	True	AAAAAG	-19
PB.4442.1	chr16	+	2933	8	full-splice_match	HERPUD1	ENST00000439977.6	2946	8	13	0	13	0	multi-exon	FALSE	canonical	1	841943	junction_1	421922.9294401855	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	185	1360	30.0	-7860	False	AATAAA	-16
PB.3521.1	chr14	-	4925	1	intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	12	NA	NA	NA	NA	NA	A	coding	117	354	2975	3328	80.0	5562	False	NA	NA
PB.4442.3	chr16	+	3080	7	novel_in_catalog	HERPUD1	novel	2946	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	841943	junction_1	455498.2342368507	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	1860	2489	20.0	1	True	AATAAA	-22
PB.4442.2	chr16	+	1968	3	full-splice_match	HERPUD1	ENST00000568676.5	571	3	-5	-1392	0	-373	multi-exon	FALSE	canonical	1	841943	junction_1	319376.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	104	538	75.0	0	True	AAAAAG	-19
PB.10329.1	chr6	-	4008	21	full-splice_match	RPS6KA2	ENST00000265678.8	5824	21	-52	1868	-52	0	multi-exon	FALSE	canonical	1	113109	junction_20	34820.19569445295	NA	0	NA	TRUE	NA	NA	NA	A	coding	733	2202	277	2478	90.0	-45	False	NA	NA
PB.11206.5	chr8	-	3854	10	novel_not_in_catalog	PAG1	novel	10744	9	NA	NA	0	-3889	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	41620.846611900604	NA	9	1	TRUE	NA	NA	NA	C	coding	408	1227	712	1938	90.0	-1	True	AAAAAG	-24
PB.1178.1	chr1	+	2076	1	intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-61	False	NA	NA
PB.5520.12	chr18	-	4251	29	novel_not_in_catalog	RTTN	novel	8088	49	NA	NA	2320	211	any annotated donor/acceptor	FALSE	canonical	1	1386	junction_28	16604.851081653145	NA	0	NA	TRUE	NA	NA	NA	C	coding	1241	3726	373	4098	45.0	9971	False	AATAAA	-38
PB.113.2	chr1	+	5955	11	novel_in_catalog	SPEN	novel	12232	15	NA	NA	-68	-8880	combination_of_known_junctions	FALSE	canonical	1	66892	junction_2	55140.70486500876	NA	1	NA	TRUE	NA	NA	NA	B	coding	1433	4299	1655	5953	75.0	-63	True	AAGAAA	-44
PB.478.10	chr1	-	3913	1	novel_in_catalog	CRYZ	novel	2301	10	NA	NA	1	-19039	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-13	True	NA	NA
PB.8826.9	chr4	+	4052	24	novel_not_in_catalog	USO1	novel	4034	24	NA	NA	59	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	339437.7986264111	NA	1	NA	TRUE	NA	NA	NA	C	coding	938	2817	164	2980	35.0	-10	True	AATAAA	-15
PB.8826.8	chr4	+	3979	25	novel_in_catalog	USO1	novel	4034	24	NA	NA	70	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	355393.6293158694	NA	1	NA	TRUE	NA	NA	NA	C	coding	969	2910	153	3062	10.0	1	True	AATAAA	-19
PB.8826.3	chr4	+	3758	23	novel_in_catalog	USO1	novel	4034	24	NA	NA	53	-2	no_combination_of_known_junctions	TRUE	canonical	0	0	junction_1	343047.9584086683	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	170	2842	15.0	-16	True	AATAAA	-18
PB.8826.2	chr4	+	3962	24	full-splice_match	USO1	ENST00000514213.6	4034	24	71	1	66	-1	multi-exon	FALSE	canonical	0	0	junction_1	316182.78788999625	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	157	3045	10.0	-3	True	AATAAA	-19
PB.8826.1	chr4	+	2714	22	incomplete-splice_match	USO1	ENST00000514213.6	4034	24	84	3686	79	-3686	3prime_fragment	FALSE	canonical	0	0	junction_1	321851.9613095549	NA	1	1	TRUE	NA	NA	NA	C	coding	857	2571	144	2714	35.0	10	True	NA	NA
PB.356.3	chr1	+	2427	13	full-splice_match	ST3GAL3	ENST00000645165.1	2261	13	-149	-17	0	-1	multi-exon	TRUE	canonical	1	9941	junction_6	61118.43814739043	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	642	1490	5.0	0	True	AATAAA	-12
PB.8826.7	chr4	+	3171	24	full-splice_match	USO1	ENST00000514213.6	4034	24	60	803	55	-803	multi-exon	FALSE	canonical	0	0	junction_1	316182.78788999625	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	168	3056	40.0	-14	True	AATAAA	-31
PB.2500.1	chr12	+	1729	3	full-splice_match	SPX	ENST00000535139.5	1826	3	98	-1	0	1	multi-exon	FALSE	canonical	1	45999	junction_1	4704.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	114	345	1	345	35.0	2	True	ATTAAA	-18
PB.8826.5	chr4	+	3044	17	novel_not_in_catalog	USO1	novel	4034	24	NA	NA	54	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	259676.60161171504	NA	5	NA	TRUE	NA	NA	NA	C	coding	680	2043	86	2128	15.0	-15	True	AATAAA	-18
PB.928.5	chr1	+	2272	6	novel_in_catalog	GORAB	novel	2189	5	NA	NA	9	-2	no_combination_of_known_junctions	FALSE	canonical	1	2556	junction_1	51772.256892664045	NA	2	1	TRUE	NA	NA	NA	C	coding	214	645	646	1290	35.0	-6	True	AATAAA	-19
PB.470.14	chr1	+	5194	14	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	12	-1	intron_retention	FALSE	canonical	1	41099	junction_3	694045.509641174	NA	2	NA	TRUE	NA	NA	NA	C	coding	294	885	3115	3999	30.0	2	True	AATAAA	-13
PB.928.7	chr1	+	2137	5	full-splice_match	GORAB	ENST00000367763.7	2189	5	50	2	28	-2	multi-exon	FALSE	canonical	1	55791	junction_2	35490.91746049262	NA	0	NA	TRUE	NA	NA	NA	C	coding	369	1110	46	1155	35.0	13	True	AATAAA	-19
PB.928.6	chr1	+	5496	6	novel_in_catalog	GORAB	novel	2189	5	NA	NA	15	386	intron_retention	FALSE	canonical	1	14666	junction_1	47062.30285313289	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	3482	4126	20.0	0	True	AATAAA	-12
PB.8538.3	chr3	-	6109	1	novel_in_catalog	PEX5L	novel	2992	14	NA	NA	-9	-130263	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.8538.2	chr3	-	3627	14	novel_in_catalog	PEX5L	novel	8540	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	8111	junction_12	10254.379638150403	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	1009	2856	30.0	0	True	AATAAA	-28
PB.8538.1	chr3	-	2993	14	full-splice_match	PEX5L	ENST00000485199.5	2992	14	10	-11	-8	1	multi-exon	FALSE	canonical	1	8111	junction_12	11013.40957207925	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	445	2220	30.0	0	True	AATAAA	-30
PB.379.4	chr1	-	3613	12	full-splice_match	GPBP1L1	ENST00000290795.7	3599	12	-3	-11	-3	11	multi-exon	FALSE	canonical	1	102794	junction_11	209699.26335907535	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1226	2650	20.0	-13	True	AATAAA	-38
PB.9011.1	chr4	+	2638	7	full-splice_match	MMAA	ENST00000649156.1	5946	7	-2	3310	-2	1157	multi-exon	FALSE	canonical	1	6883	junction_1	34527.67049491691	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	91	1347	50.0	-2	True	AATAAA	-29
PB.3637.10	chr14	-	3905	6	incomplete-splice_match	DDX24	ENST00000640432.1	2580	10	4	4981	4	-4813	3prime_fragment	FALSE	canonical	1	786468	junction_3	177276.4521853932	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	96	2108	60.0	-7	True	NA	NA
PB.379.7	chr1	-	3543	12	novel_not_in_catalog	GPBP1L1	novel	3121	5	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	7577	junction_11	233156.2415939822	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1169	2593	15.0	973	False	AATAAA	-25
PB.11360.1	chr8	+	1778	1	antisense	novelGene_TSNARE1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	4095	False	NA	NA
PB.5694.9	chr19	-	5222	40	full-splice_match	DNMT1	ENST00000340748.8	5408	40	185	1	-16	-1	multi-exon	FALSE	canonical	1	309860	junction_39	340472.52930464246	NA	0	NA	TRUE	NA	NA	NA	C	coding	1616	4851	52	4902	10.0	-28	True	AATAAA	-16
PB.6544.29	chr2	+	2445	1	novel_in_catalog	ZNF638	novel	3518	13	NA	NA	-3305	-2065	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-3593	False	NA	NA
PB.635.64	chr1	-	2828	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	-1	-55	any annotated donor/acceptor	FALSE	canonical	1	2481	junction_10	1548799.961047235	NA	4	NA	TRUE	NA	NA	NA	C	coding	400	1203	1469	2671	75.0	-2	True	NA	NA
PB.6724.1	chr2	+	1065	4	full-splice_match	GYPC	ENST00000259254.8	1246	4	179	2	-21	1	multi-exon	FALSE	canonical	1	1146064	junction_1	411716.1556900849	NA	0	NA	TRUE	NA	NA	NA	A	coding	107	324	216	539	30.0	5	True	AATAAA	-18
PB.235.7	chr1	-	2563	1	novel_in_catalog	MECR	novel	598	3	NA	NA	-1	-7488	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	66	201	170	370	90.0	-10	True	NA	NA
PB.6544.23	chr2	+	3566	21	novel_in_catalog	ZNF638	novel	871	5	NA	NA	1	-7985	combination_of_known_junctions	FALSE	canonical	1	156330	junction_1	82418.5381639956	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3279	286	3564	60.0	1	True	AATAAA	-39
PB.6544.22	chr2	+	5708	24	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	18	7780	0	675	3prime_fragment	FALSE	canonical	1	110631	junction_1	95001.3521627381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1804	5412	297	5708	70.0	0	True	TTTAAA	-41
PB.6544.21	chr2	+	3140	1	novel_in_catalog	ZNF638	novel	871	5	NA	NA	0	-13917	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.5908.2	chr19	+	3056	20	full-splice_match	GPATCH1	ENST00000170564.6	3492	20	301	135	282	1	multi-exon	FALSE	canonical	1	70922	junction_17	21550.447305677724	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	14	2809	20.0	-2	True	ATTAAA	-15
PB.4857.3	chr17	-	1707	10	full-splice_match	RAB34	ENST00000395243.7	1597	10	-111	1	-9	0	multi-exon	FALSE	canonical	1	207755	junction_3	307392.68271599006	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	594	1349	10.0	8371	False	ATTAAA	-18
PB.4857.2	chr17	-	1210	11	full-splice_match	RAB34	ENST00000436730.7	863	11	-7	-340	-1	0	multi-exon	FALSE	canonical	1	79964	junction_10	323815.5381463496	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	4	852	10.0	-2	True	ATTAAA	-18
PB.6544.25	chr2	+	4176	23	novel_in_catalog	ZNF638	novel	871	5	NA	NA	9	671	combination_of_known_junctions	FALSE	canonical	1	34163	junction_1	105334.43739245548	NA	0	NA	TRUE	NA	NA	NA	C	coding	1291	3873	302	4174	65.0	9	True	TTTAAA	-37
PB.5694.6	chr19	-	3612	22	novel_not_in_catalog	DNMT1	novel	3094	13	NA	NA	45	-1	any annotated donor/acceptor	TRUE	canonical	1	105200	junction_4	200675.00258351982	NA	2	1	TRUE	NA	NA	NA	C	coding	1039	3120	173	3292	10.0	9979	False	AATAAA	-16
PB.9545.8	chr5	+	2486	16	incomplete-splice_match	TCERG1	ENST00000394421.6	3633	21	2	7498	2	-14	3prime_fragment	FALSE	canonical	1	212876	junction_11	100101.16660356939	NA	20	2	TRUE	NA	NA	NA	C	coding	823	2469	17	2485	55.0	1	True	NA	NA
PB.3676.2	chr14	+	5742	12	full-splice_match	RCOR1	ENST00000262241.6	5754	12	-10	22	-10	-22	multi-exon	FALSE	canonical	1	142341	junction_1	51954.216466149985	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	246	1694	65.0	-1	True	AATAAA	-21
PB.3676.1	chr14	+	5569	11	novel_not_in_catalog	RCOR1	novel	5754	12	NA	NA	-34	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	81971.81403147061	NA	1	NA	TRUE	NA	NA	NA	C	coding	411	1236	270	1505	25.0	-25	True	AATAAA	-37
PB.11375.5	chr8	+	2610	9	novel_in_catalog	GSDMD	novel	2496	14	NA	NA	-4	0	intron_retention	FALSE	canonical	1	316336	junction_1	102973.55135391564	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	107	1525	40.0	-4	True	AATAAA	-12
PB.379.3	chr1	-	3591	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	17	-5	combination_of_known_junctions	FALSE	canonical	1	112552	junction_11	207349.59014246432	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	1222	2646	25.0	-43	True	AATAAA	-20
PB.9545.1	chr5	+	4648	22	full-splice_match	TCERG1	ENST00000296702.9	4654	22	-1	7	0	-7	multi-exon	FALSE	canonical	1	96933	junction_5	163130.04033960702	NA	5	NA	TRUE	NA	NA	NA	C	coding	1098	3297	40	3336	55.0	-22	True	AATAAA	-7
PB.9912.4	chr6	-	3282	5	novel_in_catalog	HLA-DOA	novel	3489	5	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	6597	junction_4	61522.86035034051	NA	0	NA	TRUE	NA	NA	NA	C	coding	99	300	44	343	35.0	-4	True	ATTAAA	-18
PB.9510.1	chr5	+	2862	1	full-splice_match	PCDHB7	ENST00000231137.5	3765	1	0	903	0	-903	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	771	2316	284	2599	15.0	-9820	False	ATTAAA	-26
PB.9545.4	chr5	+	2586	17	incomplete-splice_match	TCERG1	ENST00000549332.1	3518	23	-35	7226	0	0	3prime_fragment	FALSE	canonical	1	96933	junction_5	153426.9344170357	NA	1	NA	TRUE	NA	NA	NA	C	coding	849	2547	40	2586	15.0	-22	True	NA	NA
PB.9545.5	chr5	+	4702	23	novel_in_catalog	TCERG1	novel	1984	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	34233	junction_12	195255.34817247003	NA	3	NA	TRUE	NA	NA	NA	C	coding	1115	3348	39	3386	55.0	-21	True	AATAAA	-11
PB.10082.1	chr6	+	7955	38	novel_in_catalog	DOP1A	novel	7995	40	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	1	25715	junction_1	32381.274947479313	NA	0	NA	TRUE	NA	NA	NA	A	coding	2455	7368	284	7651	15.0	0	True	AATATA	-21
PB.9545.7	chr5	+	2682	18	incomplete-splice_match	TCERG1	ENST00000549332.1	3518	23	-34	6845	0	-282	3prime_fragment	FALSE	canonical	1	96933	junction_5	156648.96194735344	NA	0	NA	TRUE	NA	NA	NA	C	coding	881	2643	39	2681	70.0	-21	True	NA	NA
PB.484.18	chr1	-	2821	21	incomplete-splice_match	USP33	ENST00000370794.7	4327	24	-47	15653	-47	12	3prime_fragment	FALSE	canonical	1	161412	junction_20	85974.24059418902	NA	1	NA	TRUE	NA	NA	NA	C	coding	805	2418	309	2726	20.0	-30	False	AATAAA	-27
PB.484.19	chr1	-	2948	22	incomplete-splice_match	USP33	ENST00000370793.5	4502	25	0	15654	0	7	3prime_fragment	FALSE	canonical	1	57	junction_21	124539.3626679047	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2511	348	2858	35.0	17	False	AATAAA	-22
PB.3631.14	chr14	+	3293	10	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22280	10608	no_combination_of_known_junctions	FALSE	canonical	1	1808	junction_8	133475.47594507923	NA	3	NA	TRUE	NA	NA	NA	B	coding	324	975	20	994	70.0	3	True	NA	NA
PB.3631.12	chr14	+	2196	10	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22267	9431	no_combination_of_known_junctions	FALSE	canonical	1	21375	junction_3	132742.27602592632	NA	1	NA	TRUE	NA	NA	NA	B	coding	393	1182	33	1214	50.0	-10	True	AATAAA	-28
PB.3631.13	chr14	+	1377	11	full-splice_match	UBR7	ENST00000013070.10	3694	11	214	2103	-24	-6	multi-exon	FALSE	canonical	1	256567	junction_3	71293.25981668955	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	23	1300	5.0	0	True	AATAAA	-16
PB.3631.10	chr14	+	3276	10	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22266	10623	no_combination_of_known_junctions	FALSE	canonical	1	1485	junction_6	130858.35482387008	NA	0	NA	TRUE	NA	NA	NA	B	coding	104	315	788	1102	35.0	-11	True	AATAAA	-9
PB.3631.11	chr14	+	3388	10	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22267	10623	no_combination_of_known_junctions	FALSE	canonical	1	21375	junction_3	132742.27602592632	NA	0	NA	TRUE	NA	NA	NA	B	coding	393	1182	33	1214	35.0	-10	True	AATAAA	-9
PB.6946.6	chr2	+	3595	10	incomplete-splice_match	STRADB	ENST00000392249.6	2190	12	-44	2	18	-2	intron_retention	FALSE	canonical	1	184	junction_8	48252.40417217636	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	283	1356	20.0	12	True	AATAAA	-14
PB.6946.7	chr2	+	2201	12	full-splice_match	STRADB	ENST00000194530.7	2293	12	93	-1	28	1	multi-exon	FALSE	canonical	1	184	junction_8	45522.36581983312	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	273	1529	15.0	22	True	AATAAA	-17
PB.6946.4	chr2	+	2302	13	novel_in_catalog	STRADB	novel	772	6	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	184	junction_9	45762.0709251031	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	790	1632	20.0	-9	True	AATAAA	-15
PB.6946.5	chr2	+	2017	12	novel_in_catalog	STRADB	novel	772	6	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	1	184	junction_8	45547.24909656414	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	295	1152	15.0	0	True	AATAAA	-17
PB.6946.2	chr2	+	2194	11	novel_in_catalog	STRADB	novel	772	6	NA	NA	-8	1	no_combination_of_known_junctions	FALSE	canonical	1	184	junction_8	47846.54409933909	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	309	1382	15.0	-14	True	AATAAA	-17
PB.6946.3	chr2	+	3489	10	incomplete-splice_match	STRADB	ENST00000194530.7	2293	12	60	131	-5	-131	intron_retention	FALSE	canonical	1	184	junction_8	48252.40417217636	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	306	1379	55.0	-11	True	ATTAAA	-12
PB.484.16	chr1	-	4125	24	full-splice_match	USP33	ENST00000370794.7	4327	24	0	202	0	-198	multi-exon	FALSE	canonical	1	161412	junction_23	82752.46037452789	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	262	2997	40.0	17	False	GATAAA	-8
PB.6946.1	chr2	+	3134	11	novel_in_catalog	STRADB	novel	772	6	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	184	junction_8	45953.79922269757	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	321	1394	20.0	-26	True	AATAAA	-15
PB.2609.18	chr12	-	2111	15	full-splice_match	SLC11A2	ENST00000545993.7	1958	15	31	-184	31	-43	multi-exon	FALSE	canonical	1	14897	junction_14	117142.65659514628	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	102	1775	65.0	-25	True	NA	NA
PB.2609.19	chr12	-	2135	16	full-splice_match	SLC11A2	ENST00000262052.9	4132	16	0	1997	0	-43	multi-exon	FALSE	canonical	1	56829	junction_15	108770.54593960628	NA	3	NA	TRUE	NA	NA	NA	C	coding	561	1686	114	1799	65.0	-1	True	NA	NA
PB.3542.8	chr14	-	3683	13	novel_not_in_catalog	NUMB	novel	3607	11	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	884	junction_10	188962.03302521075	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	401	2323	25.0	3	True	AATAAA	-13
PB.2609.10	chr12	-	4133	16	incomplete-splice_match	SLC11A2	ENST00000547198.5	2486	17	-54	4985	-1	-1	3prime_fragment	FALSE	canonical	1	95576	junction_15	103098.07484841261	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	117	1802	15.0	-9	True	ATTAAA	-18
PB.2609.11	chr12	-	3015	6	novel_in_catalog	SLC11A2	novel	609	6	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	38	junction_5	180932.05636702414	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	160	684	15.0	-1	True	ATTAAA	-18
PB.2609.13	chr12	-	3575	16	novel_in_catalog	SLC11A2	novel	609	6	NA	NA	0	-419	combination_of_known_junctions	FALSE	canonical	1	526	junction_15	117942.25079581203	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	148	1833	65.0	2553	False	NA	NA
PB.2609.14	chr12	-	3493	15	full-splice_match	SLC11A2	ENST00000545993.7	1958	15	55	-1590	-47	-419	multi-exon	FALSE	canonical	1	14897	junction_14	117142.65659514628	NA	0	NA	TRUE	NA	NA	NA	C	coding	557	1674	78	1751	65.0	-1	True	NA	NA
PB.2609.15	chr12	-	3540	16	incomplete-splice_match	SLC11A2	ENST00000547198.5	2486	17	-50	5574	3	-419	3prime_fragment	FALSE	canonical	1	95576	junction_15	103098.07484841261	NA	1	1	TRUE	NA	NA	NA	C	coding	561	1686	113	1798	65.0	-5	True	NA	NA
PB.2609.16	chr12	-	3444	15	novel_in_catalog	SLC11A2	novel	609	6	NA	NA	24	-419	no_combination_of_known_junctions	FALSE	canonical	1	890	junction_14	119698.6323841365	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	254	1702	65.0	1515	False	NA	NA
PB.379.8	chr1	-	3553	12	novel_in_catalog	GPBP1L1	novel	3121	5	NA	NA	11	-5	no_combination_of_known_junctions	FALSE	canonical	1	7347	junction_6	270360.17479021393	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	1952	2608	25.0	1	True	AATAAA	-20
PB.5935.20	chr19	+	2034	5	novel_not_in_catalog	ZBTB32	novel	2068	7	NA	NA	-8	-3	intron_retention	FALSE	canonical	1	1989	junction_3	30518.61658377555	NA	4	NA	TRUE	NA	NA	NA	C	coding	345	1038	135	1172	35.0	-1	True	AATAAA	-21
PB.5935.21	chr19	+	2129	5	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	37895	junction_3	18741.647613003504	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	132	1016	35.0	2	True	AATAAA	-23
PB.5935.22	chr19	+	1932	4	novel_in_catalog	ZBTB32	novel	2068	7	NA	NA	-4	1	intron_retention	FALSE	canonical	1	1688	junction_2	34853.50878558236	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	131	1066	35.0	3	True	AATAAA	-25
PB.8382.1	chr3	+	2479	5	novel_in_catalog	RAB7A	novel	2244	6	NA	NA	14	-260	intron_retention	FALSE	canonical	1	1525461	junction_1	582144.1804636439	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	233	895	35.0	-1	True	ATTAAA	-17
PB.113.6	chr1	+	5033	11	incomplete-splice_match	SPEN	ENST00000375759.7	12232	15	-44	9435	-44	-8519	3prime_fragment	FALSE	canonical	1	124614	junction_2	45209.70877466477	NA	0	NA	TRUE	NA	NA	NA	B	coding	1595	4785	249	5033	75.0	-39	True	NA	NA
PB.635.68	chr1	-	2321	17	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-55	combination_of_known_junctions	FALSE	canonical	1	5228	junction_16	1645414.2357057794	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	158	2164	75.0	-1	True	NA	NA
PB.9353.5	chr5	-	5001	1	novel_in_catalog	GLRX	novel	533	3	NA	NA	523	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	101	306	4033	4338	25.0	3966	False	AATAAA	-16
PB.5413.9	chr18	-	3378	21	novel_not_in_catalog	ROCK1	novel	9484	33	NA	NA	49	-14474	any annotated donor/acceptor	FALSE	canonical	1	7117	junction_8	148486.72478928042	NA	1	NA	TRUE	NA	NA	NA	B	coding	828	2484	893	3376	55.0	-10	True	AATGAA	-42
PB.5067.1	chr17	+	2943	8	incomplete-splice_match	EFCAB13	ENST00000517484.5	3466	22	-62	83615	2	5068	3prime_fragment	FALSE	canonical	1	9026	junction_1	10968.073289027083	NA	4	1	TRUE	NA	NA	NA	A	coding	177	534	430	963	85.0	8	True	NA	NA
PB.11189.1	chr8	-	4793	5	novel_in_catalog	JPH1	novel	4378	6	NA	NA	-250	-7	intron_retention	FALSE	canonical	1	55529	junction_4	13980.802505131815	NA	3	NA	TRUE	NA	NA	NA	B	coding	661	1986	292	2277	25.0	-7	True	AATAAA	-15
PB.11791.15	chr9	-	3119	11	full-splice_match	MAPKAP1	ENST00000350766.7	3256	11	-23	160	5	-160	multi-exon	FALSE	canonical	1	337009	junction_4	196098.99032886425	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	326	1786	65.0	-19	True	NA	NA
PB.8740.5	chr4	+	3690	11	full-splice_match	KLHL5	ENST00000508137.6	2926	11	-162	-602	-141	601	multi-exon	FALSE	canonical	1	112041	junction_1	110494.40879632779	NA	3	NA	TRUE	NA	NA	NA	C	coding	568	1707	240	1946	90.0	19	True	NA	NA
PB.3640.4	chr14	+	3468	25	full-splice_match	PPP4R4	ENST00000304338.7	3868	25	14	386	-12	-386	multi-exon	FALSE	canonical	1	14554	junction_3	9290.532433014207	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	168	2762	20.0	4	True	TATAAA	-17
PB.3640.1	chr14	+	3903	25	full-splice_match	PPP4R4	ENST00000304338.7	3868	25	-22	-13	-22	13	multi-exon	FALSE	canonical	1	14554	junction_3	9290.532433014207	NA	1	NA	TRUE	NA	NA	NA	C	coding	864	2595	204	2798	55.0	0	True	AATAAA	-31
PB.3640.2	chr14	+	3758	24	novel_in_catalog	PPP4R4	novel	564	6	NA	NA	0	13	no_combination_of_known_junctions	FALSE	canonical	1	1031	junction_8	10747.800414877176	NA	2	NA	TRUE	NA	NA	NA	C	coding	823	2472	182	2653	55.0	-10	True	AATAAA	-31
PB.3640.3	chr14	+	4361	25	full-splice_match	PPP4R4	ENST00000304338.7	3868	25	13	-506	-13	506	multi-exon	FALSE	canonical	1	14554	junction_3	9290.532433014207	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	169	2763	40.0	3	True	AATAAA	-18
PB.7562.9	chr21	-	2726	16	full-splice_match	ITGB2	ENST00000302347.9	2955	16	132	97	9	-97	multi-exon	FALSE	canonical	1	733850	junction_10	206496.78632910707	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	102	2411	45.0	-20	True	ATTAAA	-25
PB.506.14	chr1	-	1806	9	incomplete-splice_match	MCOLN3	ENST00000370589.6	2756	13	-102	7301	-49	-559	3prime_fragment	FALSE	canonical	1	10979	junction_8	9262.281440572566	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	156	1298	70.0	-80	False	NA	NA
PB.506.11	chr1	-	2666	10	novel_in_catalog	MCOLN3	novel	2756	13	NA	NA	-53	-5	combination_of_known_junctions	FALSE	canonical	1	6909	junction_8	12265.415148515442	NA	10	NA	TRUE	NA	NA	NA	C	coding	380	1143	195	1337	85.0	-84	False	NA	NA
PB.506.10	chr1	-	2002	13	full-splice_match	MCOLN3	ENST00000370589.6	2756	13	-57	811	-4	15	multi-exon	FALSE	canonical	1	10979	junction_12	11246.807227189214	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	111	1772	15.0	-35	True	TTTAAA	-31
PB.113.4	chr1	+	6310	11	novel_in_catalog	SPEN	novel	12232	15	NA	NA	-62	-8519	combination_of_known_junctions	FALSE	canonical	1	66892	junction_2	55140.70486500876	NA	1	NA	TRUE	NA	NA	NA	B	coding	1554	4662	1649	6310	75.0	-57	True	NA	NA
PB.6653.12	chr2	+	4466	24	full-splice_match	EIF5B	ENST00000289371.10	5777	24	52	1259	34	-198	multi-exon	FALSE	canonical	1	606372	junction_12	147519.167913458	NA	7	1	TRUE	NA	NA	NA	C	coding	1220	3663	151	3813	25.0	16	True	AATAAA	-21
PB.5991.3	chr19	-	2381	4	full-splice_match	RPS16	ENST00000601390.1	2389	4	19	-11	7	5	multi-exon	TRUE	canonical	1	4321576	junction_1	6547057.760808914	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	9557	False	AATAAA	-27
PB.5991.2	chr19	-	2496	3	novel_in_catalog	RPS16	novel	555	5	NA	NA	-1	5	intron_retention	FALSE	canonical	1	4321576	junction_1	7989681.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2	True	AATAAA	-27
PB.5991.1	chr19	-	2598	2	novel_in_catalog	RPS16	novel	555	5	NA	NA	0	5	intron_retention	FALSE	canonical	1	20300939	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-27
PB.8437.2	chr3	+	5635	24	full-splice_match	RASA2	ENST00000286364.7	5614	24	-19	-2	-17	2	multi-exon	FALSE	canonical	1	70841	junction_1	37418.834321668	NA	1	NA	TRUE	NA	NA	NA	C	coding	849	2550	55	2604	15.0	-10	True	AATAAA	-17
PB.6653.11	chr2	+	4048	24	full-splice_match	EIF5B	ENST00000289371.10	5777	24	180	1549	162	3	multi-exon	FALSE	canonical	1	606372	junction_12	147519.167913458	NA	1	NA	TRUE	NA	NA	NA	C	coding	1220	3663	23	3685	20.0	7	True	ATTAAA	-25
PB.10712.7	chr7	+	4208	4	novel_in_catalog	ZKSCAN1	novel	8758	4	NA	NA	-1	2444	intron_retention	FALSE	canonical	1	2610	junction_3	126157.72467123138	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	221	1690	90.0	-5	True	NA	NA
PB.10712.6	chr7	+	7020	6	full-splice_match	ZKSCAN1	ENST00000324306.10	9418	6	16	2382	-2	-2381	multi-exon	FALSE	canonical	1	181452	junction_1	50290.442326151795	NA	3	NA	TRUE	NA	NA	NA	C	coding	562	1689	222	1910	95.0	-6	True	NA	NA
PB.10712.5	chr7	+	5567	6	full-splice_match	ZKSCAN1	ENST00000324306.10	9418	6	15	3836	-3	3582	multi-exon	FALSE	canonical	1	181452	junction_1	50290.442326151795	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	223	1911	80.0	-7	True	NA	NA
PB.10712.4	chr7	+	4277	6	full-splice_match	ZKSCAN1	ENST00000324306.10	9418	6	15	5126	-3	2292	multi-exon	FALSE	canonical	1	181452	junction_1	50290.442326151795	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	223	1911	40.0	-7	True	NA	NA
PB.10712.3	chr7	+	4679	7	novel_not_in_catalog	ZKSCAN1	novel	8758	4	NA	NA	-3	2444	intron_retention	FALSE	canonical	1	7922	junction_5	117527.70771609561	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	223	1023	90.0	-7	True	NA	NA
PB.10712.2	chr7	+	1646	1	novel_in_catalog	ZKSCAN1	novel	8758	4	NA	NA	1	-6664	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-5	True	TTTAAA	-35
PB.10712.1	chr7	+	5179	6	novel_not_in_catalog	ZKSCAN1	novel	8758	4	NA	NA	-1	2444	intron_retention	FALSE	canonical	1	46881	junction_5	95898.68834264627	NA	1	NA	TRUE	NA	NA	NA	C	coding	295	888	248	1135	90.0	-8123	False	NA	NA
PB.8838.11	chr4	+	2522	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	93	2978	-13	815	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	109	1398	75.0	5	True	NA	NA
PB.6446.2	chr2	-	3534	21	novel_not_in_catalog	SRBD1	novel	3681	21	NA	NA	-2	-5	any annotated donor/acceptor	FALSE	canonical	1	6683	junction_6	47736.702431436344	NA	1	NA	TRUE	NA	NA	NA	C	coding	979	2940	66	3005	25.0	-17	False	AATATA	-8
PB.10712.9	chr7	+	5326	6	full-splice_match	ZKSCAN1	ENST00000324306.10	9418	6	22	4070	4	3348	multi-exon	FALSE	canonical	1	181452	junction_1	50290.442326151795	NA	19	NA	TRUE	NA	NA	NA	C	coding	562	1689	216	1904	40.0	0	True	AATAAA	-14
PB.10712.8	chr7	+	4426	6	full-splice_match	ZKSCAN1	ENST00000324306.10	9418	6	18	4974	0	2444	multi-exon	FALSE	canonical	1	181452	junction_1	50290.442326151795	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	220	1908	90.0	-4	True	NA	NA
PB.10100.1	chr6	+	2163	2	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2095	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	100	303	1736	2038	65.0	-8	False	NA	NA
PB.10100.2	chr6	+	6806	2	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2095	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	211	636	4783	5418	25.0	-1	True	NA	NA
PB.10100.3	chr6	+	2783	2	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3513	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	211	636	1118	1753	70.0	-1	True	NA	NA
PB.10100.4	chr6	+	3140	2	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3513	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	211	636	1117	1752	25.0	0	True	NA	NA
PB.9920.1	chr6	+	4364	2	full-splice_match	RPS18	ENST00000472218.1	1109	2	-3259	4	-13	1	multi-exon	FALSE	canonical	1	19458432	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	106	321	170	490	5.0	-5321	False	AATAAA	-15
PB.10100.6	chr6	+	5674	4	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	256	junction_2	787.394155144395	NA	0	NA	FALSE	NA	NA	NA	B	coding	211	636	3653	4288	30.0	0	True	NA	NA
PB.10100.7	chr6	+	4901	2	antisense	novelGene_RNGTT_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2095	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	B	coding	100	303	1727	2029	65.0	1	True	NA	NA
PB.8838.14	chr4	+	1664	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	97	3832	-9	-39	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	0	NA	TRUE	NA	NA	NA	C	coding	429	1290	105	1394	20.0	9	True	AGTAAA	-37
PB.1137.14	chr1	-	1844	4	full-splice_match	DUSP10	ENST00000366899.3	2676	4	87	745	0	-19	multi-exon	FALSE	canonical	1	177829	junction_1	26646.787252666854	NA	0	NA	TRUE	NA	NA	NA	C	coding	482	1449	153	1601	70.0	-1	True	NA	NA
PB.11722.23	chr9	-	3610	14	full-splice_match	PTBP3	ENST00000374257.5	7240	14	-32	3662	-32	148	multi-exon	FALSE	canonical	1	259769	junction_12	122928.3672971026	NA	4	NA	TRUE	NA	NA	NA	C	coding	524	1575	282	1856	5.0	-81	False	NA	NA
PB.8838.15	chr4	+	4241	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	96	1256	-10	-1256	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	106	1395	80.0	8	True	NA	NA
PB.6451.4	chr2	-	5068	1	novel_in_catalog	PIGF	novel	1372	6	NA	NA	-4	254	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-3	True	NA	NA
PB.6451.3	chr2	-	1552	5	incomplete-splice_match	PIGF	ENST00000306465.8	1061	7	-12	10299	-8	-10168	3prime_fragment	FALSE	canonical	1	61855	junction_2	74603.81974302656	NA	0	NA	TRUE	NA	NA	NA	B	coding	205	618	116	733	45.0	-25	True	NA	NA
PB.1797.2	chr11	-	2381	3	full-splice_match	ZNF214	ENST00000278314.4	2681	3	23	277	-3	-232	multi-exon	FALSE	canonical	1	7695	junction_2	2451.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1821	294	2114	20.0	0	True	ATTAAA	-22
PB.6451.1	chr2	-	4807	7	novel_in_catalog	PIGF	novel	1372	6	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	46563	junction_2	72750.27402926626	NA	1	NA	TRUE	NA	NA	NA	B	coding	187	564	110	673	30.0	-19	True	AATAAA	-9
PB.2217.1	chr11	+	3141	19	full-splice_match	NAALAD2	ENST00000534061.5	3600	19	167	292	1	-9	multi-exon	FALSE	canonical	1	13797	junction_7	7848.429761958443	NA	1	NA	TRUE	NA	NA	NA	A	coding	740	2223	64	2286	55.0	-3	True	NA	NA
PB.8838.17	chr4	+	5464	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	129	0	-4	0	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	73	1362	5.0	-8	True	CATAAA	-32
PB.778.12	chr1	+	2755	10	novel_not_in_catalog	IL6R	novel	1496	7	NA	NA	-16	-26	any annotated donor/acceptor	FALSE	canonical	1	541	junction_5	59362.2721562741	NA	19	4	TRUE	NA	NA	NA	C	coding	423	1272	13	1284	85.0	3	True	NA	NA
PB.9620.1	chr5	-	7800	13	full-splice_match	SH3PXD2B	ENST00000311601.5	7777	13	-26	3	-26	-3	multi-exon	FALSE	canonical	1	55005	junction_12	24794.47157956229	NA	2	NA	TRUE	NA	NA	NA	A	coding	911	2736	198	2933	30.0	-54	True	AATAAA	-33
PB.778.11	chr1	+	1381	6	incomplete-splice_match	IL6R	ENST00000622330.4	1496	7	24134	-538	-16	538	5prime_fragment	FALSE	canonical	1	4057	junction_5	59553.4942330003	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	13	843	10.0	3	True	NA	NA
PB.381.4	chr1	-	3073	9	full-splice_match	IPP	ENST00000396478.3	3113	9	14	26	14	-26	multi-exon	FALSE	canonical	1	25179	junction_8	22678.65010174768	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	90	1844	95.0	13	True	NA	NA
PB.7008.2	chr2	+	2745	8	full-splice_match	CNOT9	ENST00000273064.10	4079	8	4	1330	4	-674	multi-exon	FALSE	canonical	1	287726	junction_1	136592.3742249477	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	372	1271	70.0	-56	True	NA	NA
PB.858.13	chr1	-	2895	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	0	8898	any annotated donor/acceptor	FALSE	canonical	1	7741	junction_1	106513.21845459161	NA	2	NA	TRUE	NA	NA	NA	C	coding	235	708	14	721	45.0	85	False	NA	NA
PB.858.12	chr1	-	2974	4	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-30	8833	any annotated donor/acceptor	FALSE	canonical	1	26823	junction_1	97526.95016592422	NA	1	NA	TRUE	NA	NA	NA	C	coding	252	759	107	865	30.0	-8	True	AAAAAG	-21
PB.6976.1	chr2	-	2924	2	full-splice_match	FZD5	ENST00000295417.3	6708	2	-194	3978	-194	-3978	multi-exon	FALSE	canonical	1	95292	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	585	1758	749	2506	60.0	-3	True	AATATA	-21
PB.8629.11	chr3	-	2813	4	full-splice_match	NCBP2	ENST00000422610.5	676	4	-618	-1519	-1	0	multi-exon	FALSE	canonical	1	8705	junction_3	486621.8367870476	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	0.0	1	True	AATAAA	-15
PB.8246.11	chr3	-	2361	16	full-splice_match	PROS1	ENST00000650591.1	3432	16	33	1038	-3	-971	multi-exon	FALSE	canonical	1	12339	junction_15	72206.66975268513	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	152	2278	25.0	-5	True	NA	NA
PB.858.14	chr1	-	2679	3	novel_not_in_catalog	SLAMF1	novel	4006	7	NA	NA	-4	8903	any annotated donor/acceptor	FALSE	canonical	1	1435	junction_2	12694.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	81	500	35.0	-4	True	NA	NA
PB.1012.1	chr1	+	2487	1	novel_in_catalog	TROVE2	novel	1909	11	NA	NA	19969	-90	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	765	False	AATAAA	-12
PB.10055.3	chr6	+	2304	10	full-splice_match	SMAP1	ENST00000316999.9	2403	10	107	-8	107	8	multi-exon	FALSE	canonical	1	130770	junction_4	97423.0058427274	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	142	1464	10.0	-35	True	ATTAAA	-22
PB.4577.1	chr16	+	2231	5	full-splice_match	MLYCD	ENST00000262430.5	13038	5	-39	10846	-39	9	multi-exon	FALSE	canonical	1	66172	junction_1	28948.118664042748	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	59	1540	25.0	-41	True	AGTAAA	-27
PB.4577.2	chr16	+	2433	4	incomplete-splice_match	MLYCD	ENST00000262430.5	13038	5	-31	13224	-31	-2369	3prime_fragment	FALSE	canonical	1	66172	junction_1	32647.012076996503	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	51	1082	95.0	-33	True	NA	NA
PB.10055.2	chr6	+	3084	10	full-splice_match	SMAP1	ENST00000316999.9	2403	10	138	-819	138	-26	multi-exon	FALSE	canonical	1	130770	junction_4	97423.0058427274	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	111	1433	90.0	-4	True	NA	NA
PB.381.5	chr1	-	3038	9	novel_not_in_catalog	IPP	novel	1947	10	NA	NA	17	-26	any annotated donor/acceptor	TRUE	canonical	0	0	junction_3	37059.421668956194	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	87	1154	95.0	16	True	NA	NA
PB.7008.3	chr2	+	1388	8	full-splice_match	CNOT9	ENST00000295701.9	1126	8	-259	-3	36	3	multi-exon	FALSE	canonical	1	101851	junction_7	207520.08950421336	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	340	1116	40.0	-24	True	AATAAA	-21
PB.10055.1	chr6	+	3294	11	full-splice_match	SMAP1	ENST00000370455.7	3333	11	9	30	9	-26	multi-exon	TRUE	canonical	1	49733	junction_5	140021.35565552136	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	240	1643	90.0	9	True	NA	NA
PB.941.2	chr1	-	2222	6	novel_in_catalog	CENPL	novel	2357	7	NA	NA	-69	-5	combination_of_known_junctions	FALSE	canonical	1	65536	junction_5	17969.130712419006	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	295	1329	35.0	-1	True	ATTAAA	-14
PB.6445.1	chr2	-	5171	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	16853	junction_1	210155.33198954948	NA	1	NA	TRUE	NA	NA	NA	C	coding	638	1917	126	2042	40.0	0	True	ATTAAA	-15
PB.6445.2	chr2	-	5244	15	novel_in_catalog	PREPL	novel	5657	15	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	1	16853	junction_1	192106.91664788953	NA	4	NA	TRUE	NA	NA	NA	C	coding	638	1917	200	2116	40.0	274	False	ATTAAA	-14
PB.6445.3	chr2	-	4610	14	full-splice_match	PREPL	ENST00000541738.5	6049	14	286	1153	-15	-1	multi-exon	FALSE	canonical	1	57369	junction_13	174037.1216592707	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	102	2018	20.0	-1	True	ATTAAA	-15
PB.6445.4	chr2	-	4850	14	novel_in_catalog	PREPL	novel	5657	15	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	7488	junction_1	233234.5959017818	NA	7	NA	TRUE	NA	NA	NA	C	coding	678	2037	149	2185	20.0	1	True	ATTAAA	-15
PB.6445.5	chr2	-	4708	14	full-splice_match	PREPL	ENST00000409411.5	4725	14	16	1	16	-1	multi-exon	FALSE	canonical	1	207717	junction_13	146171.0196055721	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	200	2116	20.0	274	False	ATTAAA	-15
PB.6445.6	chr2	-	4687	14	full-splice_match	PREPL	ENST00000409957.5	4703	14	15	1	0	-1	multi-exon	FALSE	canonical	1	61660	junction_13	173175.49775751223	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1917	179	2095	20.0	1	True	ATTAAA	-15
PB.6445.7	chr2	-	4665	13	novel_in_catalog	PREPL	novel	5657	15	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	7488	junction_1	200496.07791777304	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	231	2000	20.0	-1	True	ATTAAA	-15
PB.11595.11	chr9	-	4206	8	novel_in_catalog	PTAR1	novel	9876	5	NA	NA	-1	2657	combination_of_known_junctions	FALSE	canonical	1	35628	junction_1	45933.02846669757	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	23	1228	50.0	-8	True	NA	NA
PB.4380.1	chr16	+	3408	4	incomplete-splice_match	SRCAP	ENST00000395059.6	9126	29	27308	-394	616	394	5prime_fragment	FALSE	canonical	1	369882	junction_1	33771.41884625058	NA	1	NA	TRUE	NA	NA	NA	A	coding	936	2811	204	3014	20.0	-6117	False	AATAAA	-18
PB.941.1	chr1	-	2360	7	novel_in_catalog	CENPL	novel	2357	7	NA	NA	-69	-5	combination_of_known_junctions	FALSE	canonical	1	8459	junction_2	42299.76974096773	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	295	1467	35.0	-1	True	ATTAAA	-14
PB.11594.5	chr9	+	4455	22	novel_in_catalog	AL358113.1	novel	4322	24	NA	NA	138422	14	no_combination_of_known_junctions	FALSE	canonical	1	34057	junction_19	150496.30279515617	NA	2	NA	TRUE	NA	NA	NA	B	coding	1153	3462	167	3628	15.0	-7061	False	AATAAA	-21
PB.2316.1	chr11	+	1504	14	full-splice_match	HMBS	ENST00000278715.7	1501	14	-2	-1	0	0	multi-exon	FALSE	canonical	1	256127	junction_1	142246.13191042942	NA	0	NA	TRUE	NA	NA	NA	A	coding	361	1086	154	1239	5.0	-12	True	AATAAA	-16
PB.11902.1	chr9	+	3811	11	novel_in_catalog	PMPCA	novel	2174	13	NA	NA	-32	0	intron_retention	FALSE	canonical	1	216493	junction_10	214821.59792497588	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	1370	2311	10.0	-7963	False	AATAAA	-18
PB.8284.20	chr3	-	1830	2	novel_not_in_catalog	CD47	novel	5225	9	NA	NA	-4	-29220	any annotated donor/acceptor	FALSE	canonical	1	7020	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-36
PB.11902.3	chr9	+	2660	12	novel_in_catalog	PMPCA	novel	2174	13	NA	NA	0	1	intron_retention	FALSE	canonical	1	216493	junction_10	206424.1005117041	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	1335	2162	5.0	0	True	AATAAA	-20
PB.11902.2	chr9	+	2052	13	novel_in_catalog	PMPCA	novel	2174	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	5878	junction_6	255473.16217379153	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	729	1556	10.0	-2	True	AATAAA	-18
PB.11902.5	chr9	+	2091	13	full-splice_match	PMPCA	ENST00000371717.7	2174	13	82	1	-6	0	multi-exon	FALSE	canonical	1	216493	junction_11	201368.53276771135	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	18	1595	10.0	-6	True	AATAAA	-18
PB.11902.4	chr9	+	3487	11	novel_not_in_catalog	PMPCA	novel	2174	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	7288	junction_5	272208.33825098013	NA	3	NA	TRUE	NA	NA	NA	C	coding	222	669	2323	2991	10.0	1	True	AATAAA	-18
PB.3935.9	chr15	-	5912	32	novel_in_catalog	DENND4A	novel	480	2	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	1	54881	junction_31	49446.063534894	NA	0	NA	TRUE	NA	NA	NA	C	coding	1863	5592	250	5841	30.0	-1	True	TATAAA	-19
PB.3935.8	chr15	-	6209	33	novel_in_catalog	DENND4A	novel	480	2	NA	NA	-4	191	combination_of_known_junctions	FALSE	canonical	1	23733	junction_14	59192.80521616943	NA	1	NA	TRUE	NA	NA	NA	C	coding	1907	5724	221	5944	45.0	-28	True	AATAAA	-25
PB.3935.7	chr15	-	6243	32	novel_in_catalog	DENND4A	novel	480	2	NA	NA	0	192	combination_of_known_junctions	FALSE	canonical	1	54881	junction_31	49446.063534894	NA	1	NA	TRUE	NA	NA	NA	C	coding	1863	5592	386	5977	50.0	-1	True	AATAAA	-26
PB.3935.6	chr15	-	6447	33	novel_in_catalog	DENND4A	novel	480	2	NA	NA	0	433	combination_of_known_junctions	FALSE	canonical	1	23733	junction_14	59192.80521616943	NA	9	2	TRUE	NA	NA	NA	C	coding	1907	5724	217	5940	35.0	-24	True	AATATA	-24
PB.3935.5	chr15	-	6478	32	novel_not_in_catalog	DENND4A	novel	480	2	NA	NA	-39	434	any annotated donor/acceptor	FALSE	canonical	1	7911	junction_17	57554.133984208434	NA	1	NA	TRUE	NA	NA	NA	C	coding	1129	3390	2581	5970	35.0	509	False	AATATA	-25
PB.3935.4	chr15	-	6289	33	novel_not_in_catalog	DENND4A	novel	480	2	NA	NA	-380	437	any annotated donor/acceptor	FALSE	canonical	0	0	junction_32	61918.57092363798	NA	4	1	TRUE	NA	NA	NA	C	coding	1863	5592	187	5778	25.0	-1	True	AATATA	-28
PB.3935.3	chr15	-	6330	32	novel_in_catalog	DENND4A	novel	480	2	NA	NA	-9	439	combination_of_known_junctions	FALSE	canonical	1	54881	junction_31	49446.063534894	NA	0	NA	TRUE	NA	NA	NA	C	coding	1863	5592	226	5817	25.0	539	False	AATATA	-30
PB.3935.2	chr15	-	7839	32	novel_in_catalog	DENND4A	novel	480	2	NA	NA	23	-727	intron_retention	FALSE	canonical	1	3821	junction_31	62838.922285359346	NA	0	NA	TRUE	NA	NA	NA	C	coding	1907	5724	115	5838	25.0	-1	True	AGTAAA	-18
PB.3935.1	chr15	-	8555	32	novel_not_in_catalog	DENND4A	novel	480	2	NA	NA	-29	-1	intron_retention	FALSE	canonical	0	0	junction_12	58836.15431466456	NA	17	2	TRUE	NA	NA	NA	C	coding	1860	5583	246	5828	20.0	3	True	AATAAA	-20
PB.11992.1	chrX	+	3420	1	antisense	novelGene_PHKA2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	156	471	1	471	95.0	-20	False	NA	NA
PB.1687.9	chr10	-	2345	12	full-splice_match	ATE1	ENST00000369043.7	4900	12	14	2541	14	230	multi-exon	FALSE	canonical	1	115472	junction_2	35622.458749437435	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	74	1630	25.0	-2	True	NA	NA
PB.1687.8	chr10	-	3421	12	full-splice_match	ATE1	ENST00000369043.7	4900	12	-14	1493	13	1278	multi-exon	FALSE	canonical	1	115472	junction_2	35622.458749437435	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1557	102	1658	65.0	412	False	NA	NA
PB.5454.1	chr18	+	4551	22	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	-45	1	no_combination_of_known_junctions	FALSE	canonical	1	6366	junction_12	39165.15382922835	NA	1	NA	TRUE	NA	NA	NA	C	coding	1285	3858	168	4025	35.0	-44	False	AATAAA	-16
PB.3209.2	chr13	-	3400	5	novel_in_catalog	RNF219	novel	3529	6	NA	NA	-5	2	no_combination_of_known_junctions	FALSE	canonical	1	8086	junction_4	71948.82628299088	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	160	2109	20.0	0	True	AATAAA	-20
PB.3209.5	chr13	-	2674	6	full-splice_match	RNF219	ENST00000282003.6	3529	6	13	842	13	-842	multi-exon	FALSE	canonical	1	132338	junction_5	19075.51019920568	NA	0	NA	TRUE	NA	NA	NA	C	coding	726	2181	47	2227	45.0	18	False	AATAAA	-28
PB.5454.6	chr18	+	4183	14	full-splice_match	FHOD3	ENST00000589114.5	4154	14	-19	-10	-16	10	multi-exon	FALSE	canonical	1	23604	junction_12	23227.112525753684	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	139	2103	20.0	-15	True	NA	NA
PB.5454.5	chr18	+	4820	23	novel_in_catalog	FHOD3	novel	4967	25	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	1	16200	junction_10	33433.62266584319	NA	0	NA	TRUE	NA	NA	NA	C	coding	1384	4155	139	4293	35.0	-15	True	AATAAA	-17
PB.3209.6	chr13	-	2151	6	full-splice_match	RNF219	ENST00000282003.6	3529	6	25	1353	25	-1353	multi-exon	FALSE	canonical	1	132338	junction_5	19075.51019920568	NA	0	NA	TRUE	NA	NA	NA	C	coding	705	2115	35	2149	70.0	-20	True	AATAAA	-15
PB.12144.2	chrX	-	3472	6	novel_in_catalog	FTX	novel	1077	6	NA	NA	4	2776	combination_of_known_junctions	FALSE	canonical	1	9266	junction_1	56569.42636230281	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-8	True	AATAAA	-18
PB.12144.3	chrX	-	4974	1	novel_in_catalog	FTX	novel	2356	7	NA	NA	5	-6685	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-7	True	NA	NA
PB.4962.4	chr17	+	3088	8	novel_not_in_catalog	WIPF2	novel	581	4	NA	NA	-123	0	any annotated donor/acceptor	FALSE	canonical	1	5079	junction_1	66105.49012736834	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	142	1464	100.0	-12	True	NA	NA
PB.1687.2	chr10	-	5046	13	novel_in_catalog	ATE1	novel	4930	12	NA	NA	11	1	no_combination_of_known_junctions	FALSE	canonical	1	12097	junction_6	57643.55498882767	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	104	1789	10.0	410	False	AATAAA	-18
PB.4962.2	chr17	+	3082	7	novel_in_catalog	WIPF2	novel	581	4	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	7180	junction_3	75975.10303309163	NA	1	NA	TRUE	NA	NA	NA	C	coding	401	1206	253	1458	100.0	6	True	NA	NA
PB.4962.3	chr17	+	3142	8	full-splice_match	WIPF2	ENST00000323571.8	7474	8	45	4287	10	0	multi-exon	FALSE	canonical	1	115744	junction_5	35912.71147362386	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	196	1518	100.0	-3322	False	NA	NA
PB.1687.7	chr10	-	4699	12	full-splice_match	ATE1	ENST00000224652.10	4930	12	32	199	5	-196	multi-exon	FALSE	canonical	1	73519	junction_5	47944.51869910945	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	83	1639	60.0	-11	True	ACTAAA	-24
PB.4962.1	chr17	+	2293	5	novel_in_catalog	WIPF2	novel	581	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2883	junction_2	85276.36833554768	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	5	True	NA	NA
PB.8452.10	chr3	-	2537	20	full-splice_match	PLOD2	ENST00000282903.9	3732	20	124	1071	-51	-270	multi-exon	FALSE	canonical	1	434023	junction_19	121532.27213077479	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	55	2331	80.0	-35	True	AAAACA	-8
PB.8452.11	chr3	-	2488	19	full-splice_match	PLOD2	ENST00000360060.7	3665	19	110	1067	-65	-270	multi-exon	FALSE	canonical	1	187701	junction_6	153234.26431404718	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	69	2282	80.0	-49	True	AAAACA	-8
PB.12247.8	chrX	-	1706	10	novel_not_in_catalog	LAMP2	novel	2089	9	NA	NA	10	93	any annotated donor/acceptor	FALSE	canonical	1	5104	junction_1	598314.5719101488	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	128	1360	50.0	-1	True	AATAAA	-14
PB.12247.9	chrX	-	3905	9	full-splice_match	LAMP2	ENST00000371335.4	4030	9	122	3	122	-3	multi-exon	FALSE	canonical	1	787839	junction_1	391905.0149388082	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	16	1248	15.0	130	False	AATAAA	-21
PB.12247.2	chrX	-	6469	9	full-splice_match	LAMP2	ENST00000200639.8	1867	9	10	-4612	10	1613	multi-exon	FALSE	canonical	1	953995	junction_1	356261.34590871277	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	128	1360	20.0	-1	True	AATAAA	-22
PB.12247.3	chrX	-	4616	9	full-splice_match	LAMP2	ENST00000200639.8	1867	9	9	-2758	9	-241	multi-exon	FALSE	canonical	1	953995	junction_1	356261.34590871277	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	129	1361	25.0	-2	True	AATAAA	-21
PB.4823.4	chr17	+	3117	10	full-splice_match	EPN2	ENST00000347697.6	4664	10	6	1541	6	0	multi-exon	FALSE	canonical	1	73390	junction_1	44063.462860786945	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	470	2197	75.0	NA	False	AAGAAA	-41
PB.4823.5	chr17	+	4769	11	novel_in_catalog	EPN2	novel	562	3	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	380	junction_1	79240.07848708885	NA	28	2	TRUE	NA	NA	NA	C	coding	575	1728	582	2309	5.0	NA	False	TATAAA	-24
PB.4823.2	chr17	+	3434	10	full-splice_match	EPN2	ENST00000347697.6	4664	10	-13	1243	-13	278	multi-exon	FALSE	canonical	1	73390	junction_1	44063.462860786945	NA	2	NA	TRUE	NA	NA	NA	C	coding	575	1728	489	2216	5.0	NA	False	AAGAAA	-14
PB.4823.3	chr17	+	4675	10	full-splice_match	EPN2	ENST00000347697.6	4664	10	-12	1	-12	-1	multi-exon	FALSE	canonical	1	73390	junction_1	44063.462860786945	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	488	2215	5.0	NA	False	TATAAA	-24
PB.12247.4	chrX	-	2265	9	full-splice_match	LAMP2	ENST00000200639.8	1867	9	13	-411	13	411	multi-exon	FALSE	canonical	1	953995	junction_1	356261.34590871277	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	125	1357	30.0	2	True	ATTAAA	-18
PB.12247.5	chrX	-	1877	9	full-splice_match	LAMP2	ENST00000200639.8	1867	9	-9	-1	-9	1	multi-exon	FALSE	canonical	1	953995	junction_1	356261.34590871277	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	147	1379	30.0	-1	True	AATAAA	-36
PB.2010.10	chr11	+	2014	10	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	-1	5	intron_retention	FALSE	canonical	1	9980	junction_7	1549966.5634402935	NA	12	1	TRUE	NA	NA	NA	C	coding	400	1203	130	1332	25.0	-1	True	AATAAA	-41
PB.2785.14	chr12	-	1770	2	incomplete-splice_match	SLC6A15	ENST00000551010.1	546	3	862	-1292	40	1063	5prime_fragment	FALSE	canonical	1	85238	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	9	True	NA	NA
PB.2785.13	chr12	-	2621	5	full-splice_match	SLC6A15	ENST00000450363.3	4229	5	-31	1639	1	1514	multi-exon	FALSE	canonical	1	56237	junction_3	18135.945017767892	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	491	1360	35.0	6	True	ATTAAA	-25
PB.2785.12	chr12	-	2617	5	full-splice_match	SLC6A15	ENST00000450363.3	4229	5	72	1540	72	-1540	multi-exon	FALSE	canonical	1	56237	junction_3	18135.945017767892	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	388	1257	25.0	41	True	AATATA	-25
PB.2785.11	chr12	-	4250	5	full-splice_match	SLC6A15	ENST00000450363.3	4229	5	-28	7	0	-7	multi-exon	FALSE	canonical	1	56237	junction_3	18135.945017767892	NA	3	NA	TRUE	NA	NA	NA	C	coding	289	870	488	1357	30.0	9	True	AATAAA	-15
PB.2010.11	chr11	+	3467	7	novel_in_catalog	SLC3A2	novel	2161	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2084424	junction_1	831241.0932823415	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	129	893	25.0	0	True	AATAAA	-34
PB.4109.7	chr15	+	3288	5	full-splice_match	ASB7	ENST00000558747.5	2133	5	0	-1155	0	-1017	multi-exon	FALSE	canonical	1	2748	junction_4	50326.99744359383	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	712	1062	65.0	19	True	NA	NA
PB.4109.6	chr15	+	4071	6	full-splice_match	ASB7	ENST00000332783.11	4985	6	55	859	-19	-859	multi-exon	FALSE	canonical	1	65513	junction_5	22492.4415215423	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	731	1687	40.0	0	True	AATAAA	-20
PB.4109.5	chr15	+	4714	5	full-splice_match	ASB7	ENST00000343276.4	1694	5	-20	-3000	-19	3000	multi-exon	FALSE	canonical	1	103815	junction_2	12551.411043683494	NA	3	NA	TRUE	NA	NA	NA	C	coding	274	825	731	1555	90.0	0	True	NA	NA
PB.4109.4	chr15	+	3918	6	full-splice_match	ASB7	ENST00000332783.11	4985	6	50	1017	-24	-1017	multi-exon	FALSE	canonical	1	65513	junction_5	22492.4415215423	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	736	1692	65.0	-5	True	NA	NA
PB.4109.3	chr15	+	2811	6	full-splice_match	ASB7	ENST00000332783.11	4985	6	-8	2182	-8	-10	multi-exon	FALSE	canonical	1	65513	junction_5	22492.4415215423	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	794	1750	60.0	-63	True	NA	NA
PB.4109.2	chr15	+	4379	5	full-splice_match	ASB7	ENST00000558747.5	2133	5	-82	-2164	-8	-8	multi-exon	FALSE	canonical	1	2748	junction_4	50326.99744359383	NA	0	NA	TRUE	NA	NA	NA	C	coding	116	351	794	1144	35.0	-63	True	ATTAAA	-18
PB.4109.1	chr15	+	4913	6	full-splice_match	ASB7	ENST00000332783.11	4985	6	64	8	-10	-8	multi-exon	FALSE	canonical	1	65513	junction_5	22492.4415215423	NA	2	NA	TRUE	NA	NA	NA	C	coding	318	957	722	1678	35.0	9	True	ATTAAA	-18
PB.8709.8	chr4	+	1833	12	novel_not_in_catalog	LAP3	novel	2213	13	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	256240.7544049473	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	62	1450	15.0	1	True	AATAAA	-20
PB.11890.4	chr9	+	1488	14	full-splice_match	WDR5	ENST00000358625.3	3151	14	-5	1668	-5	-1668	multi-exon	FALSE	canonical	1	148371	junction_1	140704.4086906386	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	177	1181	10.0	-5	True	NA	NA
PB.10371.12	chr7	-	2150	9	novel_not_in_catalog	BRAT1	novel	2915	14	NA	NA	0	23	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	120243.32124462257	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	18	1142	25.0	1268	False	AATAAA	-20
PB.10371.13	chr7	-	2980	13	novel_in_catalog	BRAT1	novel	2915	14	NA	NA	164	0	intron_retention	FALSE	canonical	1	152012	junction_12	100706.05973354113	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	1209	2792	50.0	-7	True	ATTAAA	-21
PB.7263.1	chr20	-	2389	13	full-splice_match	NFS1	ENST00000374092.8	3012	13	-11	634	-11	10	multi-exon	TRUE	canonical	1	118490	junction_12	101565.85425955035	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	83	1456	45.0	2	True	NA	NA
PB.399.8	chr1	+	2543	4	novel_not_in_catalog	RNF11	novel	3084	3	NA	NA	29	-465	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	375255.11704261496	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	411	875	65.0	0	True	NA	NA
PB.4234.8	chr16	+	3542	11	novel_not_in_catalog	PMM2	novel	907	8	NA	NA	-3	9558	intron_retention	FALSE	canonical	1	12108	junction_9	133773.6605128229	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	50	790	25.0	-8	True	NA	NA
PB.87.10	chr1	+	4315	7	full-splice_match	TARDBP	ENST00000472476.5	1001	7	0	-3314	0	-2	multi-exon	TRUE	canonical	1	7018	junction_2	452880.1349254998	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	487	1479	15.0	-5	True	AATAAA	-18
PB.7008.7	chr2	+	2980	7	novel_in_catalog	CNOT9	novel	1621	9	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	5221	junction_1	236807.02343709927	NA	2	NA	TRUE	NA	NA	NA	C	coding	239	720	114	833	40.0	3	True	AATAAA	-18
PB.9431.14	chr5	+	1582	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-6	-533	any annotated donor/acceptor	FALSE	canonical	1	301445	junction_1	162468.6682725011	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-46	True	AATAAA	-24
PB.87.11	chr1	+	3656	6	full-splice_match	TARDBP	ENST00000240185.7	5367	6	254	1457	0	-56	multi-exon	FALSE	canonical	1	472865	junction_2	288658.82028997486	NA	4	NA	TRUE	NA	NA	NA	C	coding	414	1245	103	1347	25.0	-5	True	CATAAA	-13
PB.4234.1	chr16	+	2237	6	full-splice_match	PMM2	ENST00000565221.5	793	6	-150	-1294	-100	-1	multi-exon	FALSE	canonical	1	8352	junction_2	126531.68626869714	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	373	738	10.0	-6336	False	ATTAAA	-14
PB.4234.2	chr16	+	2277	8	full-splice_match	PMM2	ENST00000268261.8	2313	8	30	6	-3	0	multi-exon	FALSE	canonical	1	223577	junction_1	46924.25429936016	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	37	777	10.0	5	True	ATTAAA	-15
PB.4234.3	chr16	+	2238	7	full-splice_match	PMM2	ENST00000562318.5	931	7	-33	-1274	-8	0	multi-exon	FALSE	canonical	1	21513	junction_2	111090.10348773947	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	250	738	10.0	3	True	ATTAAA	-15
PB.4234.4	chr16	+	2215	7	full-splice_match	PMM2	ENST00000566604.5	986	7	-17	-1212	-1	5	multi-exon	FALSE	canonical	1	23841	junction_4	114875.71081789512	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	1540	1935	10.0	-22	True	ATTAAA	-26
PB.4234.5	chr16	+	6972	7	novel_in_catalog	PMM2	novel	907	8	NA	NA	1	-1	intron_retention	FALSE	canonical	1	223577	junction_1	47176.86455951335	NA	6	NA	TRUE	NA	NA	NA	C	coding	146	441	5033	5473	10.0	-20	True	ATTAAA	-14
PB.4234.6	chr16	+	2127	6	full-splice_match	PMM2	ENST00000566540.5	1557	6	-16	-554	5	0	multi-exon	FALSE	canonical	1	21513	junction_2	141422.5709086071	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	1457	1852	10.0	-16	True	ATTAAA	-21
PB.4234.7	chr16	+	5108	11	novel_not_in_catalog	PMM2	novel	907	8	NA	NA	-6	11121	intron_retention	FALSE	canonical	1	12108	junction_9	133773.6605128229	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	53	793	25.0	-11	True	NA	NA
PB.8709.6	chr4	+	2200	14	novel_in_catalog	LAP3	novel	2213	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4666	junction_6	306530.94884267484	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	954	1817	15.0	0	True	AATAAA	-20
PB.5422.8	chr18	+	4228	10	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	0	-19	intron_retention	FALSE	canonical	1	27556	junction_6	361419.4675336692	NA	2	NA	TRUE	NA	NA	NA	C	coding	232	699	154	852	80.0	0	True	NA	NA
PB.5422.9	chr18	+	3659	12	full-splice_match	RIOK3	ENST00000581302.5	3049	12	-5	-605	0	-4	multi-exon	FALSE	canonical	1	350772	junction_1	258514.89776170312	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	154	1428	20.0	0	True	ATTAAA	-14
PB.5422.4	chr18	+	3439	13	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	1	28579	junction_8	317758.18535041314	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	169	1119	20.0	-73	False	ATTAAA	-14
PB.5422.5	chr18	+	3067	3	full-splice_match	RIOK3	ENST00000584052.5	659	3	-13	-2395	-12	-888	multi-exon	FALSE	canonical	1	350772	junction_1	226352.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	166	510	100.0	-70	False	NA	NA
PB.5422.6	chr18	+	2788	13	full-splice_match	RIOK3	ENST00000339486.7	4038	13	457	793	-7	-181	multi-exon	FALSE	canonical	1	350772	junction_1	248043.23309197984	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	161	1720	60.0	-7	True	NA	NA
PB.5422.7	chr18	+	3377	13	full-splice_match	RIOK3	ENST00000339486.7	4038	13	653	8	168	-5	multi-exon	FALSE	canonical	1	350772	junction_1	248043.23309197984	NA	3	NA	TRUE	NA	NA	NA	C	coding	481	1446	79	1524	20.0	131	False	ATTAAA	-13
PB.5422.1	chr18	+	3566	12	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	-43	0	intron_retention	TRUE	canonical	1	28579	junction_8	330299.62844778347	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	197	1147	5.0	0	True	ATTAAA	-21
PB.5422.2	chr18	+	2933	13	full-splice_match	RIOK3	ENST00000339486.7	4038	13	478	627	-7	-15	multi-exon	FALSE	canonical	1	350772	junction_1	248043.23309197984	NA	53	5	TRUE	NA	NA	NA	C	coding	519	1560	140	1699	85.0	14	True	NA	NA
PB.5422.3	chr18	+	4910	12	novel_in_catalog	RIOK3	novel	4038	13	NA	NA	-15	0	intron_retention	FALSE	canonical	1	350772	junction_1	255675.3549925412	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	169	1185	5.0	-73	False	ATTAAA	-21
PB.512.2	chr1	-	4613	10	full-splice_match	ZNHIT6	ENST00000370574.3	2797	10	-36	-1780	-21	-1605	multi-exon	FALSE	canonical	1	137685	junction_2	57688.20722161891	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	171	1583	25.0	-40	False	ACTAAA	-9
PB.512.3	chr1	-	4326	10	full-splice_match	ZNHIT6	ENST00000370574.3	2797	10	30	-1559	30	1559	multi-exon	FALSE	canonical	1	137685	junction_2	57688.20722161891	NA	4	NA	TRUE	NA	NA	NA	C	coding	470	1413	105	1517	75.0	26	True	NA	NA
PB.512.1	chr1	-	4773	10	full-splice_match	ZNHIT6	ENST00000370574.3	2797	10	-15	-1961	0	-1424	multi-exon	TRUE	canonical	1	137685	junction_2	57688.20722161891	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	150	1562	15.0	-19	True	NA	NA
PB.512.6	chr1	-	2702	9	novel_in_catalog	ZNHIT6	novel	6080	11	NA	NA	-14	1	intron_retention	FALSE	canonical	1	9543	junction_1	89309.22704770978	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	164	1420	25.0	-33	True	AGTAAA	-18
PB.87.16	chr1	+	2668	8	novel_in_catalog	TARDBP	novel	701	5	NA	NA	6	-3	intron_retention	FALSE	canonical	1	48074	junction_6	402848.3181591213	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	97	1341	20.0	1	True	AATAAA	-17
PB.512.4	chr1	-	4224	10	full-splice_match	ZNHIT6	ENST00000370574.3	2797	10	-37	-1390	-22	1390	multi-exon	FALSE	canonical	1	137685	junction_2	57688.20722161891	NA	4	NA	TRUE	NA	NA	NA	C	coding	470	1413	172	1584	65.0	-41	False	NA	NA
PB.512.5	chr1	-	2825	10	full-splice_match	ZNHIT6	ENST00000370574.3	2797	10	-29	1	-14	-1	multi-exon	FALSE	canonical	1	137685	junction_2	57688.20722161891	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	164	1576	25.0	-33	True	AGTAAA	-16
PB.6729.9	chr2	-	1408	3	incomplete-splice_match	IWS1	ENST00000295321.8	2958	14	-13	23962	0	230	3prime_fragment	FALSE	canonical	1	306714	junction_2	80183.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1134	274	1407	50.0	7	True	AAAAAG	-20
PB.512.8	chr1	-	2462	9	novel_in_catalog	ZNHIT6	novel	6080	11	NA	NA	1	-209	intron_retention	FALSE	canonical	1	9543	junction_1	89309.22704770978	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	134	1390	65.0	-3	True	NA	NA
PB.8756.1	chr4	-	1677	1	full-splice_match	AC106052.1	ENST00000608029.1	497	1	-1185	5	-1185	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-19
PB.3783.2	chr15	-	2157	13	novel_in_catalog	RMDN3	novel	3138	12	NA	NA	-22	0	intron_retention	TRUE	canonical	1	58505	junction_12	113855.48119143555	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	92	1504	20.0	-35	False	AATAAA	-15
PB.3783.1	chr15	-	2241	13	full-splice_match	RMDN3	ENST00000338376.7	2251	13	10	0	3	0	multi-exon	FALSE	canonical	1	212185	junction_11	82620.85321565816	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	176	1588	20.0	-3	True	AATAAA	-15
PB.11656.6	chr9	+	4919	18	full-splice_match	FAM120A	ENST00000277165.10	5118	18	201	-2	32	2	multi-exon	FALSE	canonical	1	7977	junction_6	235732.21624590817	NA	2	NA	TRUE	NA	NA	NA	C	coding	1045	3138	213	3350	25.0	1	True	AATAAA	-21
PB.1092.1	chr1	-	5726	1	incomplete-splice_match	MIR29B2CHG	ENST00000608023.5	15145	5	61903	4	15456	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	A	coding	100	303	5024	5326	15.0	NA	False	AATAAA	-16
PB.10252.4	chr6	+	2582	7	incomplete-splice_match	PEX3	ENST00000367591.4	1969	12	-103	16561	70	1188	intron_retention	FALSE	canonical	1	257450	junction_4	33627.598143737036	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	167	748	80.0	1	True	NA	NA
PB.10252.2	chr6	+	1755	12	full-splice_match	PEX3	ENST00000367591.4	1969	12	-66	280	-66	-280	multi-exon	FALSE	canonical	1	216365	junction_9	35166.53302231992	NA	2	1	TRUE	NA	NA	NA	C	coding	373	1122	130	1251	40.0	-1	True	AATAAA	-12
PB.10252.3	chr6	+	1476	12	full-splice_match	PEX3	ENST00000367591.4	1969	12	-142	635	31	2	multi-exon	TRUE	canonical	1	216365	junction_9	35166.53302231992	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	206	1327	30.0	-38	True	AATAAA	-28
PB.7008.5	chr2	+	1877	8	full-splice_match	CNOT9	ENST00000273064.10	4079	8	257	1945	22	239	multi-exon	FALSE	canonical	1	287726	junction_1	136592.3742249477	NA	1	NA	TRUE	NA	NA	NA	C	coding	299	900	119	1018	25.0	-2	True	ATTAAA	-22
PB.10252.1	chr6	+	2034	12	full-splice_match	PEX3	ENST00000367591.4	1969	12	-71	6	-71	-6	multi-exon	FALSE	canonical	1	216365	junction_9	35166.53302231992	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	135	1256	35.0	-6	True	AATAAA	-11
PB.100.8	chr1	+	4767	18	novel_in_catalog	MFN2	novel	4531	18	NA	NA	10	2	intron_retention	FALSE	canonical	1	336710	junction_1	140565.48853321472	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	190	2316	10.0	-1	True	AATAAA	-19
PB.177.28	chr1	+	3787	19	novel_not_in_catalog	SRRM1	novel	480	5	NA	NA	3	-1	intron_retention	FALSE	canonical	1	6249	junction_9	199609.92842882618	NA	4	NA	TRUE	NA	NA	NA	C	coding	437	1314	26	1339	35.0	0	True	AATAAA	-11
PB.6994.1	chr2	-	2637	1	full-splice_match	AC012513.2	ENST00000441511.2	1137	1	909	-2409	909	2409	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	107	324	16	339	95.0	NA	False	NA	NA
PB.10904.4	chr7	+	2877	21	novel_in_catalog	CUL1	novel	2857	22	NA	NA	-9	-21	intron_retention	FALSE	canonical	1	6715	junction_6	174315.69950555227	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	1088	2455	70.0	0	True	NA	NA
PB.10904.5	chr7	+	4203	2	incomplete-splice_match	CUL1	ENST00000325222.8	3064	22	-17	67007	-17	-66553	3prime_fragment	FALSE	canonical	1	357757	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-8	True	NA	NA
PB.10904.6	chr7	+	1734	2	incomplete-splice_match	CUL1	ENST00000325222.8	3064	22	-15	69474	-15	-69020	3prime_fragment	FALSE	canonical	1	357757	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-6	True	NA	NA
PB.10904.7	chr7	+	2988	21	novel_in_catalog	CUL1	novel	2857	22	NA	NA	-7	-21	intron_retention	FALSE	canonical	1	9142	junction_4	176759.59664173116	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	287	2566	70.0	2	True	NA	NA
PB.10550.1	chr7	+	3288	1	antisense	novelGene_VOPP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-36	False	NA	NA
PB.10904.2	chr7	+	3067	22	full-splice_match	CUL1	ENST00000602748.5	3054	22	-34	21	-34	-21	multi-exon	FALSE	canonical	1	13982	junction_1	169029.35948906463	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	315	2645	70.0	-1137	False	NA	NA
PB.10904.3	chr7	+	3100	22	full-splice_match	CUL1	ENST00000325222.8	3064	22	37	-73	37	73	multi-exon	FALSE	canonical	1	291007	junction_8	131153.33350021145	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	243	2573	15.0	-799	False	AATAAA	-24
PB.9210.5	chr5	-	4626	8	novel_in_catalog	HMGCS1	novel	3506	11	NA	NA	27	1	intron_retention	FALSE	canonical	1	418002	junction_7	356594.65391742735	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	1918	2889	20.0	0	True	AATAAA	-21
PB.9210.7	chr5	-	3456	11	full-splice_match	HMGCS1	ENST00000325110.10	3506	11	51	-1	31	1	multi-exon	FALSE	canonical	1	372008	junction_10	354266.130998491	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	157	1719	20.0	4	True	AATAAA	-21
PB.9210.6	chr5	-	3367	10	full-splice_match	HMGCS1	ENST00000433297.2	3466	10	100	-1	61	1	multi-exon	FALSE	canonical	1	418002	junction_9	325268.98018971056	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	68	1630	20.0	-1	True	AATAAA	-21
PB.10904.8	chr7	+	2187	17	incomplete-splice_match	CUL1	ENST00000325222.8	3064	22	-1	8210	-1	-7756	3prime_fragment	FALSE	canonical	1	291007	junction_8	122412.34125742796	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	281	2185	15.0	8	True	ATTAAA	-12
PB.10904.9	chr7	+	3435	21	novel_in_catalog	CUL1	novel	2857	22	NA	NA	15	-3	intron_retention	FALSE	canonical	1	291007	junction_8	131411.35512940845	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	265	1626	15.0	24	True	AATAAA	-22
PB.9210.3	chr5	-	3366	10	novel_in_catalog	HMGCS1	novel	3506	11	NA	NA	-3	2	intron_retention	FALSE	canonical	1	39026	junction_7	462058.2443069539	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	192	1628	20.0	0	True	AATAAA	-22
PB.100.7	chr1	+	3333	12	novel_not_in_catalog	MFN2	novel	4531	18	NA	NA	9	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	260460.94325770653	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	119	1390	10.0	-2	True	AATAAA	-17
PB.1924.11	chr11	-	2324	11	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	4844	junction_9	260760.27853528614	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	400	1146	20.0	17	True	AATAAA	-36
PB.1924.10	chr11	-	2414	12	novel_in_catalog	ARFGAP2	novel	2937	15	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	8069	junction_9	249876.37744795406	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	490	1236	20.0	0	True	AATAAA	-36
PB.399.4	chr1	+	3039	4	novel_not_in_catalog	RNF11	novel	3084	3	NA	NA	6	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	375255.11704261496	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	440	904	40.0	-23	True	AATAAA	-30
PB.10163.19	chr6	-	2190	13	incomplete-splice_match	REV3L	ENST00000368802.7	10701	32	277	77180	-15	11535	3prime_fragment	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	1	NA	TRUE	NA	NA	NA	C	coding	714	2142	47	2188	50.0	5	True	AATACA	-42
PB.10163.18	chr6	-	2452	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	548	77258	44	11436	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	1	1	TRUE	NA	NA	NA	C	coding	603	1809	642	2450	50.0	-1	True	AATATA	-11
PB.9683.1	chr5	-	2054	4	incomplete-splice_match	TRIM7	ENST00000393319.7	2320	5	1681	-682	-492	-1	5prime_fragment	FALSE	canonical	1	26454	junction_1	8044.310908959201	NA	1	NA	TRUE	NA	NA	NA	A	coding	205	618	202	819	5.0	6054	False	AATGAA	-13
PB.10163.11	chr6	-	3917	13	incomplete-splice_match	REV3L	ENST00000368802.7	10701	32	17	75713	17	13002	3prime_fragment	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	0	NA	TRUE	NA	NA	NA	C	coding	1203	3609	307	3915	70.0	21	True	NA	NA
PB.10163.10	chr6	-	4082	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	484	75692	-2	13002	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	1	NA	TRUE	NA	NA	NA	C	coding	1125	3375	706	4080	70.0	-16	True	NA	NA
PB.10163.13	chr6	-	3462	13	incomplete-splice_match	REV3L	ENST00000368805.5	10461	33	4	76199	4	12516	intron_retention	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	0	NA	TRUE	NA	NA	NA	C	coding	1041	3123	338	3460	65.0	-10	True	NA	NA
PB.10163.12	chr6	-	3537	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	543	76178	39	12516	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2889	647	3535	65.0	-6	True	NA	NA
PB.10163.15	chr6	-	3312	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	528	76418	24	12276	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	1	NA	TRUE	NA	NA	NA	C	coding	883	2649	662	3310	60.0	551	False	NA	NA
PB.10163.14	chr6	-	3475	14	incomplete-splice_match	REV3L	ENST00000435970.5	10943	34	497	76286	-7	12408	internal_fragment	FALSE	canonical	1	21216	junction_13	37760.225546381596	NA	1	NA	TRUE	NA	NA	NA	C	coding	927	2781	693	3473	65.0	-3	True	AATAGA	-25
PB.10163.17	chr6	-	2684	13	incomplete-splice_match	REV3L	ENST00000368805.5	10461	33	3	76978	3	11737	intron_retention	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	1	NA	TRUE	NA	NA	NA	C	coding	782	2346	339	2684	55.0	-11	True	AATAAA	-34
PB.10163.16	chr6	-	3219	13	incomplete-splice_match	REV3L	ENST00000368805.5	10461	33	7	76439	7	12276	intron_retention	FALSE	canonical	1	39115	junction_12	29067.715753717024	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2883	335	3217	60.0	-7	True	NA	NA
PB.4839.2	chr17	+	5518	19	novel_not_in_catalog	KSR1	novel	6004	21	NA	NA	34842	-104	any annotated donor/acceptor	FALSE	canonical	1	23	junction_4	68110.9651476821	NA	4	1	TRUE	NA	NA	NA	B	coding	565	1698	883	2580	35.0	0	True	ATTAAA	-13
PB.4839.1	chr17	+	5944	19	novel_not_in_catalog	KSR1	novel	6004	21	NA	NA	-23	0	any annotated donor/acceptor	FALSE	canonical	1	23	junction_4	61735.858676949225	NA	4	1	TRUE	NA	NA	NA	B	coding	565	1698	1205	2902	0.0	-1	True	AATAAA	-14
PB.11712.11	chr9	+	3614	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	268219	-491	no_combination_of_known_junctions	FALSE	canonical	1	136664	junction_1	40191.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	863	2592	26	2617	50.0	-8727	False	NA	NA
PB.7959.1	chr3	-	2778	9	full-splice_match	SH3BP5	ENST00000383791.7	2822	9	47	-3	-26	3	multi-exon	FALSE	canonical	1	335756	junction_8	80310.21478927821	NA	1	NA	TRUE	NA	NA	NA	C	coding	455	1368	175	1542	15.0	3	True	AATAAA	-19
PB.10228.7	chr6	-	5677	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-15	-291	0	-1	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	2	NA	TRUE	NA	NA	NA	C	coding	871	2616	247	2862	10.0	-1	True	AATAAA	-17
PB.10228.6	chr6	-	5785	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	46	1432	-10	-1	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	1	NA	TRUE	NA	NA	NA	C	coding	920	2763	208	2970	10.0	38	True	AATAAA	-17
PB.10228.1	chr6	-	7241	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	22	0	0	0	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	3	NA	TRUE	NA	NA	NA	C	coding	920	2763	232	2994	30.0	14	True	AATAAA	-22
PB.10228.3	chr6	-	6066	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-15	-680	0	388	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	8	NA	TRUE	NA	NA	NA	C	coding	871	2616	247	2862	25.0	-1	True	TATAAA	-16
PB.10228.2	chr6	-	6213	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	7	1043	0	388	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	2	NA	TRUE	NA	NA	NA	C	coding	920	2763	247	3009	25.0	-1	True	TATAAA	-16
PB.9679.2	chr5	+	1581	2	full-splice_match	LINC00847	ENST00000501937.2	1809	2	275	-47	275	-1	multi-exon	FALSE	canonical	1	42430	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	501	893	25.0	-63	True	AATAAA	-37
PB.10228.8	chr6	-	5537	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	7	1719	0	4	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	247	3009	5.0	-1	True	AATAAA	-21
PB.9679.1	chr5	+	1649	2	full-splice_match	LINC00847	ENST00000508309.1	671	2	-58	-920	12	21	multi-exon	FALSE	canonical	1	17460	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	595	987	30.0	-783	False	AATAAA	-11
PB.1773.9	chr11	+	3822	10	novel_in_catalog	STIM1	novel	625	5	NA	NA	-30	-3	no_combination_of_known_junctions	FALSE	canonical	1	1049	junction_2	190802.0500129278	NA	32	1	TRUE	NA	NA	NA	B	coding	525	1578	837	2414	10.0	8	True	AATAAA	-20
PB.1773.8	chr11	+	4098	12	novel_not_in_catalog	STIM1	novel	625	5	NA	NA	-38	0	any annotated donor/acceptor	FALSE	canonical	1	1795	junction_9	132544.38766131288	NA	1	NA	TRUE	NA	NA	NA	B	coding	692	2079	608	2686	10.0	0	True	AATAAA	-24
PB.7959.2	chr3	-	1988	9	full-splice_match	SH3BP5	ENST00000383791.7	2822	9	23	811	23	-14	multi-exon	FALSE	canonical	1	335756	junction_8	80310.21478927821	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	199	1566	70.0	8773	False	NA	NA
PB.5979.1	chr19	-	2124	13	novel_not_in_catalog	AC008982.1	novel	963	8	NA	NA	-9809	-18918	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	651451.0294207123	NA	1	NA	TRUE	NA	NA	NA	B	coding	589	1770	22	1791	20.0	-51	True	AATAAA	-24
PB.5979.2	chr19	-	1886	13	novel_not_in_catalog	AC008982.1	novel	963	8	NA	NA	-12168	-18919	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	665163.2893695425	NA	1	NA	TRUE	NA	NA	NA	B	coding	456	1371	184	1554	20.0	0	True	AATAAA	-23
PB.1773.1	chr11	+	3401	12	novel_in_catalog	STIM1	novel	625	5	NA	NA	133	-6	combination_of_known_junctions	TRUE	canonical	1	6591	junction_1	146766.177227814	NA	1	NA	TRUE	NA	NA	NA	B	coding	611	1836	161	1996	20.0	-2465	False	AATAAA	-17
PB.3692.4	chr14	+	4709	23	full-splice_match	INF2	ENST00000392634.8	4672	23	-28	-9	3	7	multi-exon	FALSE	canonical	1	128019	junction_1	132068.0457739948	NA	0	NA	TRUE	NA	NA	NA	C	coding	1249	3750	141	3890	15.0	-9	True	AATAAA	-20
PB.1773.3	chr11	+	4402	13	novel_not_in_catalog	STIM1	novel	625	5	NA	NA	-539	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	142062.92006837734	NA	1	NA	TRUE	NA	NA	NA	B	coding	685	2058	936	2993	15.0	-30	True	AATAAA	-21
PB.1773.2	chr11	+	4513	13	novel_not_in_catalog	STIM1	novel	625	5	NA	NA	-539	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	142062.92006837734	NA	3	1	TRUE	NA	NA	NA	B	coding	685	2058	1041	3098	10.0	-30	True	AATAAA	-27
PB.1773.5	chr11	+	4172	13	novel_in_catalog	STIM1	novel	625	5	NA	NA	-43	-2	combination_of_known_junctions	FALSE	canonical	1	25730	junction_11	168283.60654534868	NA	1	NA	TRUE	NA	NA	NA	B	coding	716	2151	613	2763	15.0	-5	True	AATAAA	-21
PB.1773.4	chr11	+	3065	10	novel_not_in_catalog	STIM1	novel	625	5	NA	NA	-76	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	142986.22257484187	NA	2	1	TRUE	NA	NA	NA	B	coding	413	1242	646	1887	20.0	-1499	False	AATAAA	-17
PB.3692.3	chr14	+	1697	5	full-splice_match	INF2	ENST00000398337.8	1689	5	-18	10	-3	-10	multi-exon	FALSE	canonical	1	128019	junction_1	194356.72226411413	NA	0	NA	TRUE	NA	NA	NA	C	coding	234	705	147	851	50.0	-15	True	NA	NA
PB.1773.6	chr11	+	2419	8	novel_not_in_catalog	STIM1	novel	625	5	NA	NA	-43	6023	any annotated donor/acceptor	FALSE	canonical	1	4897	junction_7	155140.06762527695	NA	1	NA	TRUE	NA	NA	NA	B	coding	326	981	613	1593	30.0	-5	True	NA	NA
PB.165.1	chr1	+	2696	4	novel_in_catalog	PITHD1	novel	1603	6	NA	NA	13	0	intron_retention	FALSE	canonical	1	668420	junction_1	89827.6935669371	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	1484	1840	10.0	0	True	AATAAA	-17
PB.165.2	chr1	+	2312	5	novel_in_catalog	PITHD1	novel	1603	6	NA	NA	13	-2	intron_retention	FALSE	canonical	1	668420	junction_2	80124.0676962141	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	1102	1458	15.0	0	True	AATAAA	-15
PB.165.3	chr1	+	1586	6	full-splice_match	PITHD1	ENST00000246151.8	1603	6	14	3	14	-3	multi-exon	TRUE	canonical	1	656582	junction_1	84252.79581260197	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	98	733	15.0	1	True	AATAAA	-14
PB.3081.5	chr13	-	7441	13	novel_not_in_catalog	SLC7A1	novel	7347	13	NA	NA	-31	-4	any annotated donor/acceptor	FALSE	canonical	1	6120	junction_2	111990.05508535494	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	419	2350	20.0	65	False	AATAAA	-15
PB.100.4	chr1	+	4614	20	novel_in_catalog	MFN2	novel	4531	18	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	7407	junction_3	247190.0658405824	NA	0	NA	TRUE	NA	NA	NA	C	coding	661	1986	684	2669	10.0	-4344	False	AATAAA	-19
PB.8230.1	chr3	-	2833	11	full-splice_match	SHQ1	ENST00000325599.12	2879	11	46	0	-19	0	multi-exon	FALSE	canonical	1	55559	junction_1	32769.50632539343	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	95	1828	25.0	5	True	NA	NA
PB.8230.3	chr3	-	2476	11	full-splice_match	SHQ1	ENST00000325599.12	2879	11	48	355	-17	325	multi-exon	FALSE	canonical	1	55559	junction_1	32769.50632539343	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	93	1826	25.0	7	True	NA	NA
PB.8230.4	chr3	-	3378	11	novel_not_in_catalog	SHQ1	novel	4024	3	NA	NA	11	26237	any annotated donor/acceptor	FALSE	canonical	1	1498	junction_1	42919.22400090664	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	122	1426	95.0	-22	True	NA	NA
PB.6130.3	chr19	+	1935	14	novel_in_catalog	RUVBL2	novel	2009	15	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	347222	junction_1	494733.85028609005	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	40	807	15.0	-14	True	TATAAA	-17
PB.9585.5	chr5	+	2421	7	full-splice_match	CNOT8	ENST00000285896.10	2528	7	105	2	-1	-1	multi-exon	FALSE	canonical	1	143299	junction_1	185408.37544788053	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	191	1069	20.0	24	True	AATAAA	-22
PB.8230.7	chr3	-	1750	9	novel_not_in_catalog	SHQ1	novel	2844	11	NA	NA	26	-4228	any annotated donor/acceptor	FALSE	canonical	1	7534	junction_1	46226.81314842475	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	107	1240	95.0	-7	True	AGTAAA	-27
PB.6351.3	chr2	-	6032	40	novel_not_in_catalog	ITSN2	novel	2035	2	NA	NA	-27	1	intron_retention	FALSE	canonical	1	8935	junction_3	84171.6427350172	NA	7	1	TRUE	NA	NA	NA	C	coding	1527	4584	270	4853	30.0	-17	True	AATAAA	-20
PB.399.1	chr1	+	2632	3	full-splice_match	RNF11	ENST00000242719.3	3084	3	245	207	177	-207	multi-exon	FALSE	canonical	1	795200	junction_2	835.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	242	706	35.0	4	True	AATGAA	-8
PB.11136.9	chr8	-	3184	3	novel_not_in_catalog	TMEM68	novel	2477	7	NA	NA	119	0	any annotated donor/acceptor	FALSE	canonical	1	464	junction_2	96391.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	998	1405	25.0	410	False	ATTAAA	-18
PB.6569.10	chr2	+	3081	12	incomplete-splice_match	TTC31	ENST00000233623.9	3235	13	-2	330	0	-3	intron_retention	FALSE	canonical	1	86690	junction_8	52483.32603411588	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	10	1302	30.0	0	True	NA	NA
PB.9027.10	chr4	-	2349	13	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-35889	0	any annotated donor/acceptor	FALSE	canonical	1	2163	junction_12	85217.583208571	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	164	2287	85.0	7863	False	NA	NA
PB.8191.3	chr3	+	3825	22	full-splice_match	APPL1	ENST00000288266.7	6058	22	-6	2239	5	-2239	multi-exon	FALSE	canonical	1	166360	junction_1	74868.2144823069	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	154	2283	20.0	-35	True	AATATA	-20
PB.8191.4	chr3	+	2437	22	full-splice_match	APPL1	ENST00000288266.7	6058	22	-6	3627	5	1820	multi-exon	FALSE	canonical	1	166360	junction_1	74868.2144823069	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	154	2283	25.0	-35	True	AAAAAG	-11
PB.8191.5	chr3	+	2498	23	novel_not_in_catalog	APPL1	novel	2821	24	NA	NA	0	1829	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	133746.37609144795	NA	1	1	TRUE	NA	NA	NA	C	coding	343	1032	253	1284	10.0	-29	True	AAAAAG	-20
PB.8191.6	chr3	+	5975	22	full-splice_match	APPL1	ENST00000288266.7	6058	22	79	4	-15	-4	multi-exon	FALSE	canonical	1	166360	junction_1	74868.2144823069	NA	7	NA	TRUE	NA	NA	NA	C	coding	709	2130	69	2198	40.0	8	True	AATAAA	-28
PB.8191.7	chr3	+	1881	19	novel_in_catalog	APPL1	novel	2821	24	NA	NA	1	1	no_combination_of_known_junctions	FALSE	canonical	1	2862	junction_9	95505.60653286212	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1734	147	1880	35.0	-28	True	AAAACA	-24
PB.8191.8	chr3	+	4856	22	full-splice_match	APPL1	ENST00000288266.7	6058	22	102	1100	0	-1100	multi-exon	FALSE	canonical	1	166360	junction_1	74868.2144823069	NA	1	NA	TRUE	NA	NA	NA	C	coding	709	2130	46	2175	40.0	-31	True	NA	NA
PB.8191.9	chr3	+	5177	22	full-splice_match	APPL1	ENST00000288266.7	6058	22	2	879	2	-879	multi-exon	FALSE	canonical	1	166360	junction_1	74868.2144823069	NA	0	NA	TRUE	NA	NA	NA	C	coding	709	2130	146	2275	75.0	-27	True	NA	NA
PB.11483.1	chr9	-	796	3	full-splice_match	CDKN2A	ENST00000579755.1	1283	3	235	252	22	-4	multi-exon	FALSE	canonical	1	361687	junction_2	266485.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	255	572	60.0	-2	True	TATAAA	-6
PB.11205.1	chr8	-	2408	1	intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.11483.2	chr9	-	3146	1	novel_in_catalog	CDKN2A	novel	1283	3	NA	NA	-45	-1971	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	102	309	2	310	80.0	867	False	NA	NA
PB.11673.6	chr9	+	5863	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	11	-696	11	696	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	2	1	TRUE	NA	NA	NA	C	coding	790	2373	246	2618	25.0	21	True	ATTAAA	-22
PB.11673.7	chr9	+	3631	24	novel_not_in_catalog	NCBP1	novel	5178	23	NA	NA	-25	-120	intron_retention	TRUE	canonical	1	19658	junction_23	144249.2925998518	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	282	2654	25.0	-250	False	AATAAA	-20
PB.11673.4	chr9	+	4983	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	161	34	-95	-26	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	96	2468	25.0	1	True	AATAAA	-18
PB.177.29	chr1	+	5537	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	3	-1	intron_retention	FALSE	canonical	1	96387	junction_3	188320.2245976941	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2508	2055	4562	35.0	0	True	AATAAA	-11
PB.11673.2	chr9	+	2833	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	225	2120	-31	1552	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	32	2404	30.0	0	True	AATAAA	-18
PB.11673.3	chr9	+	2661	24	novel_not_in_catalog	NCBP1	novel	5178	23	NA	NA	91	-932	any annotated donor/acceptor	FALSE	canonical	1	19658	junction_23	144249.2925998518	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	124	2496	10.0	0	True	NA	NA
PB.11673.1	chr9	+	2700	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	163	2315	-93	1357	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	94	2466	25.0	3	True	NA	NA
PB.10151.9	chr6	-	4415	26	novel_not_in_catalog	MICAL1	novel	4112	25	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	6060	junction_25	232518.49294935662	NA	2	1	TRUE	NA	NA	NA	C	coding	652	1959	1838	3796	30.0	744	False	ATTAAA	-13
PB.11673.8	chr9	+	3598	24	novel_not_in_catalog	NCBP1	novel	5178	23	NA	NA	91	-3	intron_retention	FALSE	canonical	1	19658	junction_23	144249.2925998518	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	124	2496	35.0	0	True	NA	NA
PB.9027.13	chr4	-	2602	13	novel_not_in_catalog	FBXW7	novel	5653	12	NA	NA	-4	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	107944.33901977753	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	1138	2544	70.0	-5	True	NA	NA
PB.969.9	chr1	+	7864	15	full-splice_match	XPR1	ENST00000367590.8	8474	15	18	592	-10	-592	multi-exon	FALSE	canonical	1	188467	junction_7	36179.713793838695	NA	4	NA	TRUE	NA	NA	NA	C	coding	696	2091	181	2271	40.0	0	True	AAAAAG	-13
PB.8295.18	chr3	-	1898	2	incomplete-splice_match	BTLA	ENST00000383680.4	726	4	-63	11915	-63	-8267	3prime_fragment	FALSE	canonical	1	116658	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	212	639	64	702	85.0	202	False	NA	NA
PB.100.2	chr1	+	4275	18	full-splice_match	MFN2	ENST00000444836.5	4531	18	251	5	-3	1	multi-exon	FALSE	canonical	1	53521	junction_1	191016.007847039	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	58	2331	10.0	-14	True	AATAAA	-18
PB.1619.10	chr10	+	3403	21	novel_in_catalog	NFKB2	novel	562	2	NA	NA	64	-1	intron_retention	FALSE	canonical	1	257847	junction_11	197039.16962482358	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	191	1663	15.0	35	True	NA	NA
PB.1619.11	chr10	+	2796	20	incomplete-splice_match	NFKB2	ENST00000189444.10	3011	23	696	-4	696	-1	5prime_fragment	FALSE	canonical	1	257847	junction_9	195623.66938832556	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2316	329	2644	15.0	-5636	False	NA	NA
PB.31.4	chr1	-	2910	11	novel_in_catalog	GNB1	novel	3145	11	NA	NA	-27	-1	no_combination_of_known_junctions	FALSE	canonical	1	1854	junction_10	1262506.274766383	NA	3	1	TRUE	NA	NA	NA	C	coding	340	1023	112	1134	15.0	1325	False	AATAAA	-18
PB.3726.5	chr15	-	2622	17	novel_in_catalog	TUBGCP5	novel	3588	24	NA	NA	0	-285	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	817	2454	27	2480	35.0	-1	True	AATAAA	-7
PB.3726.4	chr15	-	2536	18	incomplete-splice_match	TUBGCP5	ENST00000620435.4	3342	22	1	5793	1	-278	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2508	29	2536	15.0	-3	True	AATAAA	-14
PB.3726.7	chr15	-	1594	13	incomplete-splice_match	TUBGCP5	ENST00000620435.4	3342	22	-10	17690	-10	-8014	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1554	40	1593	70.0	-14	True	NA	NA
PB.3726.6	chr15	-	2433	17	novel_in_catalog	TUBGCP5	novel	3588	24	NA	NA	0	-285	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1581	851	2431	35.0	-1	True	AATAAA	-7
PB.3726.1	chr15	-	3561	22	novel_in_catalog	TUBGCP5	novel	3588	24	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	963	2892	27	2918	10.0	-1	True	AATAAA	-19
PB.171.6	chr1	+	1615	3	full-splice_match	PNRC2	ENST00000334351.7	2416	3	16	785	0	-769	multi-exon	FALSE	canonical	1	96250	junction_2	14564.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	396	815	20.0	0	True	AATAAA	-14
PB.3726.3	chr15	-	3742	23	full-splice_match	TUBGCP5	ENST00000615383.4	3849	23	102	5	1	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	1024	3075	29	3103	20.0	-3	True	AATAAA	-15
PB.171.4	chr1	+	2457	3	novel_not_in_catalog	PNRC2	novel	2428	4	NA	NA	123	-2	any annotated donor/acceptor	FALSE	canonical	1	4435	junction_1	45907.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	139	420	471	890	30.0	-596	False	AATAAA	-17
PB.8182.7	chr3	-	3271	10	novel_not_in_catalog	CHDH	novel	7665	9	NA	NA	-36	-4529	any annotated donor/acceptor	FALSE	canonical	1	540	junction_8	50037.03659648546	NA	0	NA	TRUE	NA	NA	NA	C	coding	594	1785	574	2358	100.0	-8	True	NA	NA
PB.10366.4	chr7	-	2533	18	novel_not_in_catalog	MAD1L1	novel	548	2	NA	NA	22	0	any annotated donor/acceptor	FALSE	canonical	1	17669	junction_15	76839.39873893179	NA	0	NA	TRUE	NA	NA	NA	B	coding	671	2016	242	2257	15.0	-12	True	AATAAA	-17
PB.11660.1	chr9	+	3065	1	full-splice_match	AL158152.1	ENST00000602652.1	1435	1	-28	-1602	-28	1602	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-2489	False	AATAAA	-24
PB.10366.2	chr7	-	2739	19	novel_not_in_catalog	MAD1L1	novel	548	2	NA	NA	-5	5	any annotated donor/acceptor	FALSE	canonical	1	5842	junction_17	86911.83899614228	NA	1	NA	TRUE	NA	NA	NA	B	coding	718	2157	301	2457	10.0	-6	True	AATAAA	-23
PB.10366.3	chr7	-	1309	4	novel_in_catalog	MAD1L1	novel	548	2	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	67883	junction_3	126654.373937719	NA	1	NA	TRUE	NA	NA	NA	B	coding	174	525	509	1033	15.0	-10	True	AATAAA	-17
PB.656.5	chr1	-	1472	5	full-splice_match	SEC22B	ENST00000578049.3	6922	5	-5	5455	-5	938	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	197	787	30.0	-1	True	NA	NA
PB.10366.1	chr7	-	2699	19	novel_not_in_catalog	MAD1L1	novel	548	2	NA	NA	3	5	any annotated donor/acceptor	TRUE	canonical	1	114674	junction_18	57009.805290054064	NA	0	NA	TRUE	NA	NA	NA	B	coding	718	2157	261	2417	10.0	2	True	AATAAA	-23
PB.11530.1	chr9	-	3992	3	novel_in_catalog	SPAG8	novel	678	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	14543	junction_1	2132.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	455	1368	119	1486	40.0	-4	True	NA	NA
PB.5727.1	chr19	-	1672	8	full-splice_match	ECSIT	ENST00000270517.11	1700	8	20	8	-17	5	multi-exon	FALSE	canonical	1	217259	junction_6	146615.9955388113	NA	0	NA	TRUE	NA	NA	NA	A	coding	431	1296	117	1412	10.0	-21	True	AATAAA	-36
PB.11284.55	chr8	-	2096	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	27	238	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	517612.5711917382	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	740	1831	45.0	-4	True	AATAAA	-7
PB.717.8	chr1	+	3531	12	novel_not_in_catalog	VPS45	novel	2315	15	NA	NA	11	0	intron_retention	FALSE	canonical	1	7471	junction_7	117552.05054572265	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	1761	2339	30.0	0	True	AATAAA	-19
PB.9667.7	chr5	+	2239	15	full-splice_match	CANX	ENST00000247461.8	4260	15	60	1961	-2	57	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	141	1919	35.0	-16	True	AATAGA	-24
PB.9667.6	chr5	+	4393	15	full-splice_match	CANX	ENST00000247461.8	4260	15	21	-154	-17	154	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	180	1958	20.0	-55	True	NA	NA
PB.9667.5	chr5	+	3718	15	full-splice_match	CANX	ENST00000452673.6	4207	15	20	469	-18	-469	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	128	1906	30.0	-56	True	AATAAA	-24
PB.9667.4	chr5	+	4146	15	full-splice_match	CANX	ENST00000247461.8	4260	15	114	0	-6	0	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	38	1	TRUE	NA	NA	NA	C	coding	592	1779	87	1865	15.0	-9291	False	ATTAAA	-18
PB.9667.3	chr5	+	2532	15	full-splice_match	CANX	ENST00000452673.6	4207	15	19	1656	19	362	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	129	1907	45.0	-57	True	ATTAAA	-12
PB.9667.2	chr5	+	4150	15	novel_in_catalog	CANX	novel	585	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	9485	junction_1	1519327.4993207972	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	91	1869	15.0	-9392	False	ATTAAA	-18
PB.9667.1	chr5	+	4285	15	full-splice_match	CANX	ENST00000504734.5	2232	15	-34	-2019	-23	1	multi-exon	FALSE	canonical	1	12118	junction_1	1518733.4327221366	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	225	2003	15.0	-20	True	ATTAAA	-19
PB.11783.1	chr9	+	6538	8	full-splice_match	OLFML2A	ENST00000373580.7	6425	8	-113	0	0	0	multi-exon	FALSE	canonical	1	41067	junction_6	21211.582022997893	NA	2	NA	TRUE	NA	NA	NA	A	coding	652	1959	114	2072	40.0	-2	True	NA	NA
PB.2868.2	chr12	-	1496	3	full-splice_match	MTERF2	ENST00000240050.8	1790	3	20	274	3	-16	multi-exon	FALSE	canonical	1	57249	junction_2	31736.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	383	1149	347	1495	40.0	-1	True	ATTAAA	-6
PB.9667.9	chr5	+	4909	15	full-splice_match	CANX	ENST00000247461.8	4260	15	74	-723	3	723	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	127	1905	35.0	-2	True	AATAAA	-30
PB.9667.8	chr5	+	2529	15	full-splice_match	CANX	ENST00000247461.8	4260	15	75	1656	-3	362	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	126	1904	45.0	-1	True	ATTAAA	-12
PB.3302.22	chr14	-	3530	26	full-splice_match	SUPT16H	ENST00000216297.6	4684	26	247	907	-6	-900	multi-exon	FALSE	canonical	1	153336	junction_24	274844.71571066015	NA	1	NA	TRUE	NA	NA	NA	C	coding	1047	3144	93	3236	30.0	-1	True	AATAAA	-39
PB.3302.23	chr14	-	3331	26	full-splice_match	SUPT16H	ENST00000216297.6	4684	26	244	1109	-9	979	multi-exon	FALSE	canonical	1	153336	junction_24	274844.71571066015	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	96	3239	20.0	-4	True	NA	NA
PB.7151.3	chr20	-	2453	4	novel_in_catalog	C20orf27	novel	933	3	NA	NA	13	-1	intron_retention	FALSE	canonical	1	515604	junction_3	58491.815452154406	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	193	537	15.0	6	False	AATAAA	-18
PB.3302.21	chr14	-	3845	25	novel_in_catalog	SUPT16H	novel	4684	26	NA	NA	-9	-900	intron_retention	FALSE	canonical	1	153336	junction_23	277957.5822018251	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	96	2513	30.0	-4	True	AATAAA	-39
PB.3302.26	chr14	-	1390	11	incomplete-splice_match	SUPT16H	ENST00000216297.6	4684	26	248	11966	-5	5911	3prime_fragment	FALSE	canonical	1	153336	junction_9	211082.9267073962	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1299	92	1390	50.0	0	True	AAGAAA	-28
PB.3302.27	chr14	-	1202	9	incomplete-splice_match	SUPT16H	ENST00000216297.6	4684	26	250	13605	-3	4272	3prime_fragment	FALSE	canonical	1	153336	junction_7	218178.58791505956	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1113	90	1202	45.0	2	True	AATACA	-6
PB.3800.8	chr15	+	3172	1	novel_in_catalog	MGA	novel	584	2	NA	NA	335	-20772	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	NA	NA
PB.3302.25	chr14	-	2573	20	incomplete-splice_match	SUPT16H	ENST00000216297.6	4684	26	250	6773	-3	-4685	3prime_fragment	FALSE	canonical	1	153336	junction_18	289027.097030318	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	90	2507	55.0	2	True	AATAAA	-14
PB.3800.6	chr15	+	3920	11	incomplete-splice_match	MGA	ENST00000545763.5	11413	23	10	40686	10	15773	3prime_fragment	FALSE	canonical	1	44565	junction_1	46114.16282109001	NA	0	NA	TRUE	NA	NA	NA	C	coding	1249	3747	172	3918	30.0	-9	True	AAAAAG	-5
PB.3800.7	chr15	+	2778	10	novel_in_catalog	MGA	novel	584	2	NA	NA	21	15773	no_combination_of_known_junctions	FALSE	canonical	1	10501	junction_1	55879.17648919955	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2376	401	2776	30.0	2	True	AAAAAG	-5
PB.3800.4	chr15	+	3577	9	full-splice_match	MGA	ENST00000566718.5	3439	9	0	-138	0	-20	multi-exon	FALSE	canonical	1	44565	junction_1	50632.88919454923	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3396	182	3577	75.0	-19	True	NA	NA
PB.3800.5	chr15	+	7906	22	novel_in_catalog	MGA	novel	584	2	NA	NA	1	0	no_combination_of_known_junctions	TRUE	canonical	1	44565	junction_1	58188.940382117726	NA	0	NA	TRUE	NA	NA	NA	C	coding	2575	7725	181	7905	75.0	-18	True	AAAACA	-18
PB.3800.2	chr15	+	2461	8	novel_in_catalog	MGA	novel	584	2	NA	NA	-15	-20	no_combination_of_known_junctions	FALSE	canonical	1	10501	junction_1	62809.59326733586	NA	1	NA	TRUE	NA	NA	NA	C	coding	675	2025	437	2461	75.0	-34	True	NA	NA
PB.3800.3	chr15	+	3557	9	novel_not_in_catalog	MGA	novel	584	2	NA	NA	-1	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	61458.69701970076	NA	3	1	TRUE	NA	NA	NA	C	coding	1132	3396	162	3557	75.0	-20	True	NA	NA
PB.8260.29	chr3	-	4398	17	novel_not_in_catalog	DCBLD2	novel	6122	16	NA	NA	-3	5	any annotated donor/acceptor	FALSE	canonical	1	3910	junction_16	249482.46998335593	NA	2	NA	TRUE	NA	NA	NA	C	coding	669	2010	795	2804	20.0	2	True	AATAAA	-17
PB.3800.1	chr15	+	2416	8	novel_in_catalog	MGA	novel	584	2	NA	NA	-30	-20	no_combination_of_known_junctions	FALSE	canonical	1	2783	junction_1	64927.807064807734	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2025	392	2416	75.0	-25	True	NA	NA
PB.7670.1	chr22	-	3534	15	full-splice_match	TFIP11	ENST00000407690.5	3586	15	27	25	0	-25	multi-exon	TRUE	canonical	1	134249	junction_13	66520.8799598491	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	258	2771	55.0	-6	True	AATAAA	-11
PB.7312.17	chr20	+	5007	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-3	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	147692.67903615275	NA	15	NA	TRUE	NA	NA	NA	C	coding	487	1464	58	1521	45.0	0	True	AATAAA	-16
PB.7670.3	chr22	-	4249	14	novel_in_catalog	TFIP11	novel	3402	13	NA	NA	0	-4	intron_retention	FALSE	canonical	1	273529	junction_12	42319.463260989316	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	1654	4167	35.0	-6	True	AATAAA	-22
PB.7670.2	chr22	-	2851	15	full-splice_match	TFIP11	ENST00000407690.5	3586	15	29	706	2	-4	multi-exon	FALSE	canonical	1	134249	junction_13	66520.8799598491	NA	13	2	TRUE	NA	NA	NA	C	coding	837	2514	256	2769	35.0	-4	True	AATAAA	-22
PB.7670.5	chr22	-	2895	16	novel_in_catalog	TFIP11	novel	3402	13	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	1	2729	junction_14	117465.9690320941	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	300	2813	35.0	-13	True	AATAAA	-22
PB.7670.4	chr22	-	2930	16	full-splice_match	TFIP11	ENST00000405938.5	2896	16	21	-55	0	-4	multi-exon	FALSE	canonical	1	23192	junction_13	114048.60409121873	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	335	2848	35.0	-6	True	AATAAA	-22
PB.7312.10	chr20	+	4441	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-10	-905	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_11	147692.67903615275	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	65	1528	85.0	-7	True	NA	NA
PB.7312.11	chr20	+	4844	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	-8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	63	1526	45.0	-5	True	AATAAA	-25
PB.7312.18	chr20	+	5332	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	0	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_11	147692.67903615275	NA	1	1	TRUE	NA	NA	NA	C	coding	487	1464	55	1518	45.0	3	True	AATAAA	-25
PB.7312.19	chr20	+	5319	12	novel_not_in_catalog	STK4	novel	6342	11	NA	NA	0	55	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	147692.67903615275	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	55	1518	20.0	3	True	AATATA	-36
PB.5248.6	chr17	+	5031	32	full-splice_match	TMEM94	ENST00000314256.11	5213	32	183	-1	-3	1	multi-exon	FALSE	canonical	1	113969	junction_1	117227.74870186936	NA	1	1	TRUE	NA	NA	NA	C	coding	1356	4071	212	4282	25.0	-3	True	ATTAAA	-16
PB.5248.7	chr17	+	5352	32	novel_in_catalog	TMEM94	novel	554	5	NA	NA	0	353	combination_of_known_junctions	FALSE	canonical	1	104784	junction_14	128268.43675308484	NA	0	NA	TRUE	NA	NA	NA	C	coding	1344	4035	209	4243	35.0	0	True	AATAAA	-8
PB.5248.4	chr17	+	4993	32	novel_in_catalog	TMEM94	novel	554	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	104784	junction_14	123570.32028640075	NA	0	NA	TRUE	NA	NA	NA	C	coding	1340	4023	223	4245	30.0	-14	True	ATTAAA	-15
PB.5248.5	chr17	+	4901	32	novel_in_catalog	TMEM94	novel	554	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	28261	junction_18	136267.69357945828	NA	2	NA	TRUE	NA	NA	NA	C	coding	797	2394	214	2607	30.0	-5	True	ATTAAA	-15
PB.5248.2	chr17	+	4841	31	novel_in_catalog	TMEM94	novel	554	5	NA	NA	-16	-1	no_combination_of_known_junctions	FALSE	canonical	1	9212	junction_13	132003.15625963898	NA	0	NA	TRUE	NA	NA	NA	C	coding	1286	3861	234	4094	30.0	-25	True	ATTAAA	-14
PB.5248.3	chr17	+	2061	1	novel_in_catalog	TMEM94	novel	554	5	NA	NA	-6	1010	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	8	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-15	True	NA	NA
PB.5248.1	chr17	+	5068	32	novel_in_catalog	TMEM94	novel	554	5	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	1	113969	junction_1	122303.46907140067	NA	0	NA	TRUE	NA	NA	NA	C	coding	1360	4083	237	4319	25.0	-28	True	ATTAAA	-16
PB.11759.2	chr9	-	5298	8	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	2605	3873	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	109854.72929895617	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	90	1340	20.0	-2	True	GATAAA	-16
PB.5248.8	chr17	+	4641	29	novel_in_catalog	TMEM94	novel	554	5	NA	NA	-463	0	combination_of_known_junctions	FALSE	canonical	1	104784	junction_11	121137.8838382946	NA	26	NA	TRUE	NA	NA	NA	C	coding	1272	3819	75	3893	30.0	9303	False	ATTAAA	-15
PB.7438.3	chr21	-	2430	4	novel_in_catalog	CU633906.1	novel	2380	4	NA	NA	-1	-72	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	355	717	20.0	NA	False	NA	NA
PB.7438.2	chr21	-	2509	4	novel_not_in_catalog	CU633906.1	novel	2380	4	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	362	724	25.0	NA	False	NA	NA
PB.7438.1	chr21	-	2629	3	full-splice_match	CU633906.1	ENST00000617746.4	859	3	-50	-1720	-8	287	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	120	363	194	556	70.0	NA	False	NA	NA
PB.11499.7	chr9	-	1707	12	full-splice_match	SMU1	ENST00000397149.3	7122	12	-50	5465	-50	-5465	multi-exon	FALSE	canonical	1	110256	junction_7	184835.58098487565	NA	0	NA	TRUE	NA	NA	NA	C	coding	513	1542	102	1643	5.0	21	False	AATGAA	-18
PB.1583.19	chr10	-	3812	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	57	-6	any annotated donor/acceptor	FALSE	canonical	1	404	junction_5	40856.2790383831	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2301	287	2587	40.0	0	True	AATAAA	-21
PB.7438.5	chr21	-	3419	1	genic	CU633906.1	novel	NA	NA	NA	NA	-19	-31321	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	ATTAAA	-15
PB.7438.4	chr21	+	1536	3	full-splice_match	CU634019.1	ENST00000621909.4	859	3	-23	-654	6	-646	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	120	363	167	529	35.0	NA	False	TATAAA	-18
PB.807.18	chr1	-	2622	11	novel_not_in_catalog	AL353807.3	novel	2505	9	NA	NA	-28570	-44729	any annotated donor/acceptor	FALSE	canonical	1	7404	junction_3	276203.253121845	NA	1	NA	TRUE	NA	NA	NA	B	coding	703	2112	309	2420	15.0	180	False	NA	NA
PB.1583.15	chr10	-	3661	16	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-4	any annotated donor/acceptor	FALSE	canonical	1	185	junction_15	36422.64182400832	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	164	2434	35.0	-1	True	AATAAA	-23
PB.1583.16	chr10	-	4171	17	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-5	any annotated donor/acceptor	FALSE	canonical	1	81	junction_14	38183.33424884966	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	675	2945	40.0	-1	True	AATAAA	-22
PB.1583.10	chr10	-	3288	14	novel_not_in_catalog	LOXL4	novel	3653	15	NA	NA	56	-3	any annotated donor/acceptor	FALSE	canonical	1	81	junction_13	38131.606356323486	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	375	2060	40.0	-1	True	AATAAA	-24
PB.8498.8	chr3	-	3943	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50606	-29561	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	51731.799790962126	NA	2	NA	TRUE	NA	NA	NA	B	coding	640	1923	511	2433	55.0	-8	True	NA	NA
PB.9677.1	chr5	+	4149	2	novel_not_in_catalog	CNOT6	novel	456	2	NA	NA	-60	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-44	True	AATAAA	-19
PB.7557.1	chr21	+	2257	1	genic	LINC01424	novel	NA	NA	NA	NA	-728	-612	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	117	354	1377	1730	50.0	-31	False	AATAAA	-23
PB.9677.3	chr5	+	4395	12	novel_in_catalog	CNOT6	novel	456	2	NA	NA	-58	-1530	combination_of_known_junctions	FALSE	canonical	1	65702	junction_5	72820.93627329305	NA	10	NA	TRUE	NA	NA	NA	B	coding	552	1659	118	1776	20.0	199	False	AATAAA	-16
PB.9677.4	chr5	+	2598	2	novel_not_in_catalog	CNOT6	novel	6176	12	NA	NA	20688	-1533	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-13
PB.9677.5	chr5	+	4000	9	novel_not_in_catalog	CNOT6	novel	6176	12	NA	NA	34948	-1530	any annotated donor/acceptor	FALSE	canonical	1	1942	junction_1	94720.63345628224	NA	0	NA	TRUE	NA	NA	NA	B	coding	382	1149	233	1381	20.0	NA	False	AATAAA	-16
PB.9677.6	chr5	+	3939	9	novel_not_in_catalog	CNOT6	novel	6176	12	NA	NA	34994	-1530	any annotated donor/acceptor	FALSE	canonical	1	1942	junction_1	107976.50103082326	NA	3	NA	TRUE	NA	NA	NA	B	coding	382	1149	172	1320	20.0	NA	False	AATAAA	-16
PB.7478.6	chr21	-	5505	30	full-splice_match	LTN1	ENST00000361371.9	7685	30	23	2157	23	-2157	multi-exon	FALSE	canonical	1	97835	junction_19	35234.60122910544	NA	0	NA	TRUE	NA	NA	NA	C	coding	1766	5301	58	5358	30.0	0	True	TTTAAA	-41
PB.5232.4	chr17	-	2469	12	full-splice_match	FDXR	ENST00000578473.5	2482	12	10	3	10	-1	multi-exon	FALSE	canonical	1	12299	junction_11	121982.699573707	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	1408	2154	25.0	21	False	AATAAA	-12
PB.8498.2	chr3	-	4075	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50299	-29538	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	59761.34827606263	NA	1	NA	TRUE	NA	NA	NA	B	coding	777	2334	209	2542	35.0	-3	True	AATAAA	-14
PB.8498.3	chr3	-	4049	21	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50606	-29538	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	64885.48672890957	NA	2	1	TRUE	NA	NA	NA	B	coding	460	1383	1134	2516	35.0	-8	True	AATAAA	-14
PB.5232.1	chr17	-	1969	12	novel_in_catalog	FDXR	novel	1561	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4142	junction_11	104675.95649613222	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	187	1653	25.0	-7	False	AATAAA	-13
PB.8498.5	chr3	-	3951	20	novel_not_in_catalog	AC079594.2	novel	3360	19	NA	NA	50591	-29593	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	51731.799790962126	NA	0	NA	TRUE	NA	NA	NA	B	coding	777	2334	140	2473	25.0	289	False	TTTAAA	-20
PB.5232.3	chr17	-	1842	12	full-splice_match	FDXR	ENST00000582944.5	1766	12	-33	-43	-3	0	multi-exon	FALSE	canonical	1	4683	junction_9	109120.10041007171	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	75	1526	25.0	-1	True	AATAAA	-13
PB.5232.2	chr17	-	1839	12	full-splice_match	FDXR	ENST00000293195.9	1875	12	32	4	-6	0	multi-exon	FALSE	canonical	1	164674	junction_11	71953.76290678814	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	48	1523	25.0	-18	True	AATAAA	-13
PB.5363.2	chr18	-	3045	6	novel_in_catalog	METTL4	novel	3601	8	NA	NA	-8	0	intron_retention	FALSE	canonical	1	3947	junction_1	33752.04812985428	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	532	1509	20.0	-6	True	ATTAAA	-21
PB.5363.3	chr18	-	3075	9	full-splice_match	METTL4	ENST00000574538.1	2742	9	-19	-314	4	314	multi-exon	FALSE	canonical	1	69577	junction_3	11115.881217176397	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	796	2214	45.0	-3	True	AATAAA	-17
PB.7145.8	chr20	-	2612	1	novel_in_catalog	UBOX5	novel	4631	5	NA	NA	10740	-24151	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	764	2295	67	2361	25.0	NA	False	AATAAA	-23
PB.5363.1	chr18	-	3418	9	full-splice_match	METTL4	ENST00000574538.1	2742	9	240	-916	-13	-6	multi-exon	FALSE	canonical	1	69577	junction_3	11115.881217176397	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	537	1955	25.0	256	False	ATTAAA	-15
PB.5363.6	chr18	-	2449	4	novel_not_in_catalog	METTL4	novel	3601	8	NA	NA	11	5530	intron_retention	FALSE	canonical	1	4174	junction_1	39539.588636650675	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	789	1349	10.0	4	True	AATAAA	-22
PB.7650.1	chr22	-	3629	3	novel_not_in_catalog	ZNF70	novel	6924	2	NA	NA	-13	-458	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	7319.5	NA	11	2	TRUE	NA	NA	NA	C	coding	446	1341	475	1815	30.0	6	True	TATAAA	-18
PB.5363.4	chr18	-	2957	8	full-splice_match	METTL4	ENST00000319888.10	3601	8	30	614	7	314	multi-exon	FALSE	canonical	1	4598	junction_1	29112.949862105514	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	770	2029	45.0	23	True	AATAAA	-17
PB.5363.5	chr18	-	2923	8	novel_not_in_catalog	METTL4	novel	3601	8	NA	NA	6	314	intron_retention	FALSE	canonical	1	657	junction_6	31978.19289861803	NA	4	NA	TRUE	NA	NA	NA	C	coding	422	1269	794	2062	45.0	-1	True	AATAAA	-17
PB.7145.2	chr20	-	3389	6	novel_not_in_catalog	UBOX5	novel	4631	5	NA	NA	8	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	35663.5411051679	NA	4	NA	TRUE	NA	NA	NA	C	coding	541	1626	145	1770	20.0	-7	True	AATAAA	-16
PB.7145.3	chr20	-	2269	5	full-splice_match	UBOX5	ENST00000217173.6	4631	5	325	2037	5	-2037	multi-exon	FALSE	canonical	1	35164	junction_1	23766.39947883356	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	148	1773	0.0	-10	True	AATAAA	-19
PB.8138.1	chr3	-	2114	2	full-splice_match	TMEM115	ENST00000266025.3	2197	2	83	0	83	0	multi-exon	FALSE	canonical	1	570873	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	351	1056	465	1520	5.0	-7	True	AATAAA	-21
PB.7145.1	chr20	-	3766	6	novel_not_in_catalog	UBOX5	novel	4631	5	NA	NA	3	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	35663.5411051679	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	150	1775	20.0	-12	True	AATAAA	-16
PB.7145.6	chr20	-	2836	2	full-splice_match	FASTKD5	ENST00000380266.3	2874	2	33	5	33	-5	multi-exon	FALSE	canonical	1	180092	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	764	2295	290	2584	20.0	-3	True	AATAAA	-24
PB.7145.7	chr20	-	2902	3	novel_not_in_catalog	UBOX5	novel	4631	5	NA	NA	-1	-24151	any annotated donor/acceptor	FALSE	canonical	1	5122	junction_1	766.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	357	2651	25.0	-16	True	AATAAA	-23
PB.7145.4	chr20	-	2129	4	full-splice_match	UBOX5	ENST00000348031.6	4469	4	302	2038	-18	-2038	multi-exon	FALSE	canonical	1	27205	junction_1	31019.881176790834	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	171	1634	0.0	-33	True	AATAAA	-18
PB.7145.5	chr20	-	2045	3	incomplete-splice_match	UBOX5	ENST00000217173.6	4631	5	326	13167	6	1634	3prime_fragment	FALSE	canonical	1	80968	junction_2	9809.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	147	1667	15.0	-9	True	AGTAAA	-17
PB.1585.16	chr10	-	1509	10	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	0	-20	any annotated donor/acceptor	FALSE	canonical	1	17693	junction_9	146614.94990225078	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	176	1150	75.0	-33	True	NA	NA
PB.1585.17	chr10	-	2442	8	novel_in_catalog	HPS1	novel	3678	20	NA	NA	277	-99	combination_of_known_junctions	FALSE	canonical	1	155744	junction_6	129517.79655620888	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	1287	2162	40.0	329	False	ATTAAA	-26
PB.1585.14	chr10	-	2505	17	novel_in_catalog	HPS1	novel	3678	20	NA	NA	-3	-11	combination_of_known_junctions	FALSE	canonical	1	54378	junction_12	149434.66863351816	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	225	1967	30.0	-2	True	NA	NA
PB.1585.15	chr10	-	2700	19	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	-7	-15	any annotated donor/acceptor	FALSE	canonical	1	17693	junction_18	138163.3820692099	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	163	2166	35.0	-20	True	NA	NA
PB.1585.12	chr10	-	2792	20	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	5	-9	any annotated donor/acceptor	FALSE	canonical	1	17693	junction_19	130819.40147508384	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	150	2252	30.0	-7	True	NA	NA
PB.1585.13	chr10	-	2678	18	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	53	-9	any annotated donor/acceptor	FALSE	canonical	1	9488	junction_17	153798.29206837373	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	504	2138	30.0	105	False	NA	NA
PB.1585.10	chr10	-	2728	19	novel_not_in_catalog	HPS1	novel	3678	20	NA	NA	-8	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	153625.09859571516	NA	1	1	TRUE	NA	NA	NA	C	coding	647	1944	244	2187	30.0	-21	True	NA	NA
PB.1585.11	chr10	-	2606	18	novel_in_catalog	HPS1	novel	3678	20	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	1	54378	junction_13	141766.75383346234	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	224	2065	30.0	-1	True	NA	NA
PB.11614.11	chr9	+	3255	17	novel_in_catalog	CEP78	novel	11198	16	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	16821	junction_1	47897.12252431637	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	569	2425	10.0	19	True	AATGAA	-13
PB.1585.18	chr10	-	2683	9	novel_in_catalog	HPS1	novel	3678	20	NA	NA	2	-104	intron_retention	FALSE	canonical	1	155744	junction_6	114355.22156749119	NA	15	NA	TRUE	NA	NA	NA	C	coding	133	402	254	655	40.0	-31	True	ATTAAA	-21
PB.1585.19	chr10	-	2434	5	novel_in_catalog	HPS1	novel	3678	20	NA	NA	-5	1610	intron_retention	FALSE	canonical	1	155744	junction_2	143411.7409585073	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	241	642	75.0	-18	True	TATAAA	-9
PB.8779.11	chr4	+	2199	18	full-splice_match	FIP1L1	ENST00000358575.9	2180	18	-13	-6	-11	6	multi-exon	FALSE	canonical	1	199597	junction_1	222498.42216121076	NA	0	NA	TRUE	NA	NA	NA	C	coding	588	1767	208	1974	45.0	-11	True	AATAAA	-25
PB.11747.2	chr9	+	3599	9	full-splice_match	TMEM268	ENST00000288502.8	2314	9	240	-1525	-12	-736	multi-exon	FALSE	canonical	1	17285	junction_1	48418.21096172777	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	198	1226	35.0	-10	True	AATAAA	-20
PB.3328.1	chr14	+	1815	7	novel_not_in_catalog	BCL2L2-PABPN1	novel	1241	9	NA	NA	14499	-14	intron_retention	FALSE	non_canonical	0	0	junction_1	527265.2750402043	NA	5	NA	TRUE	NA	NA	NA	A	coding	264	795	5	799	70.0	4	True	AAAAAG	-24
PB.8779.17	chr4	+	2067	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	214827.25753176922	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	202	1899	30.0	-5	True	AATAAA	-26
PB.1086.1	chr1	+	4296	1	intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	NA	NA
PB.11865.3	chr9	-	2980	6	incomplete-splice_match	MED27	ENST00000292035.9	1431	8	41	21717	-1	-21717	3prime_fragment	FALSE	canonical	1	12971	junction_1	11455.12658332504	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	24	785	100.0	-1	True	NA	NA
PB.11865.2	chr9	-	1832	7	novel_not_in_catalog	MED27	novel	1281	7	NA	NA	1	-8190	any annotated donor/acceptor	FALSE	canonical	1	9475	junction_1	12056.656051280921	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	22	822	80.0	1	True	NA	NA
PB.2434.1	chr12	+	2399	2	incomplete-splice_match	RPL13P5	ENST00000451612.5	587	3	-14	-1347	-14	1044	intron_retention	FALSE	canonical	1	13877	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	A	coding	144	435	677	1111	15.0	-12	True	AATAAA	-30
PB.11692.2	chr9	-	3269	2	full-splice_match	MRPL50	ENST00000374865.4	3332	2	-3	66	-3	-66	multi-exon	FALSE	canonical	1	575835	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	26	502	40.0	-19	True	AATAAA	-30
PB.9678.11	chr5	-	2874	4	novel_not_in_catalog	MGAT1	novel	8863	3	NA	NA	3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	90272.89907214063	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	452	1789	35.0	0	True	AATAAA	-14
PB.6699.1	chr2	-	4767	9	full-splice_match	CKAP2L	ENST00000302450.10	4533	9	20	-254	7	254	multi-exon	FALSE	canonical	1	107813	junction_2	24534.38543147148	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	60	2297	50.0	9921	False	AATAAA	-15
PB.7547.1	chr21	-	2054	3	full-splice_match	CSTB	ENST00000291568.6	2164	3	107	3	-20	-3	multi-exon	FALSE	canonical	1	4006719	junction_2	1851765.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	98	297	70	366	20.0	-31	True	AATAAA	-11
PB.7547.2	chr21	-	627	3	full-splice_match	CSTB	ENST00000291568.6	2164	3	100	1437	-27	-1423	multi-exon	FALSE	canonical	1	4006719	junction_2	1851765.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	98	297	77	373	10.0	-38	True	AATAGA	-22
PB.7547.3	chr21	-	2396	1	full-splice_match	CSTB	ENST00000480147.3	3744	1	-77	1425	-27	-1425	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-38	True	AATAGA	-20
PB.8430.21	chr3	-	3029	21	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	4	no_combination_of_known_junctions	FALSE	canonical	1	13633	junction_14	458560.6275867211	NA	0	NA	TRUE	NA	NA	NA	C	coding	559	1680	1076	2755	15.0	-6	True	CATAAA	-17
PB.8430.20	chr3	-	3172	22	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	19845	junction_21	364009.3863134753	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	265	2898	15.0	-6	True	CATAAA	-17
PB.8779.19	chr4	+	1878	18	novel_not_in_catalog	FIP1L1	novel	582	7	NA	NA	-4	-43	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	229219.6407226123	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	201	1688	70.0	-4	True	NA	NA
PB.10345.11	chr6	+	5046	10	novel_in_catalog	FAM120B	novel	3721	11	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	7653	junction_3	80200.954732164	NA	1	NA	TRUE	NA	NA	NA	C	coding	876	2631	106	2736	40.0	-3	True	AATAAA	-23
PB.8430.27	chr3	-	3333	21	novel_in_catalog	COPB2	novel	433	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	930352	junction_20	253807.79269953474	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	1258	3063	25.0	3	True	CATAAA	-13
PB.8430.26	chr3	-	3338	23	novel_not_in_catalog	COPB2	novel	433	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	1177	junction_20	497875.4098563932	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	582	3068	25.0	-26	True	CATAAA	-13
PB.8430.29	chr3	-	3043	22	novel_not_in_catalog	COPB2	novel	433	4	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	622	junction_10	373544.619603084	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	119	2773	25.0	-26	True	CATAAA	-13
PB.8430.28	chr3	-	3142	22	novel_in_catalog	COPB2	novel	433	4	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	13633	junction_14	503627.3964497852	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	1193	2872	25.0	-5	True	CATAAA	-13
PB.4403.1	chr16	+	3297	1	intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-17
PB.8803.4	chr4	-	2574	15	incomplete-splice_match	CENPC	ENST00000273853.10	6940	19	47	24170	47	487	3prime_fragment	FALSE	canonical	1	12417	junction_13	28943.827433760485	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2370	205	2574	70.0	3	True	AAGAAA	-15
PB.3878.6	chr15	-	6171	40	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	0	135	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	73370.9237097169	NA	2	1	TRUE	NA	NA	NA	B	coding	1289	3870	75	3944	20.0	-1	True	AATAAA	-18
PB.2726.30	chr12	+	3399	19	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	-3053	-1934	any annotated donor/acceptor	FALSE	canonical	1	3048	junction_12	241017.8814049212	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	139	2337	85.0	-85	False	NA	NA
PB.3878.4	chr15	-	12069	40	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	-16	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	73370.9237097169	NA	22	1	TRUE	NA	NA	NA	B	coding	1289	3870	91	3960	25.0	-17	True	AATAAA	-11
PB.8803.1	chr4	-	3257	19	full-splice_match	CENPC	ENST00000273853.10	6940	19	157	3526	34	203	multi-exon	FALSE	canonical	1	12417	junction_17	25948.650227093214	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	95	2926	40.0	-1	True	ATTAAA	-20
PB.2726.34	chr12	+	2454	17	incomplete-splice_match	XPOT	ENST00000332707.9	6414	25	17027	2446	-1803	-2446	5prime_fragment	FALSE	canonical	1	29892	junction_3	244364.81803793862	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	9	1904	25.0	1165	False	AATAAA	-13
PB.10861.20	chr7	-	1765	4	novel_in_catalog	CYREN	novel	2576	3	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	1	71194	junction_2	154895.71042120206	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	471	944	30.0	-24	True	AATACA	-29
PB.9546.4	chr5	+	5400	14	novel_in_catalog	STK32A	novel	2063	11	NA	NA	-23	2	intron_retention	FALSE	canonical	1	236	junction_2	6356.961785942165	NA	11	NA	TRUE	NA	NA	NA	C	coding	394	1185	345	1529	15.0	-27	True	ATTAAA	-20
PB.9546.3	chr5	+	5192	13	full-splice_match	STK32A	ENST00000397936.7	5393	13	65	136	-27	-124	multi-exon	FALSE	canonical	1	10832	junction_8	3372.1783379672484	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	269	1459	25.0	-31	True	ATTAAA	-19
PB.9546.2	chr5	+	4914	14	full-splice_match	STK32A	ENST00000398523.3	1637	14	-101	-3176	-31	2	multi-exon	FALSE	canonical	1	10599	junction_13	3499.0591584142785	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	273	1496	15.0	-35	True	ATTAAA	-20
PB.3878.9	chr15	-	3995	22	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	16904	135	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	88997.12726979812	NA	2	1	TRUE	NA	NA	NA	B	coding	540	1623	1846	3468	20.0	10	True	AATAAA	-18
PB.3878.8	chr15	-	4091	23	novel_not_in_catalog	MYO5A	novel	12225	41	NA	NA	16872	135	any annotated donor/acceptor	FALSE	canonical	1	2648	junction_22	94355.56906748847	NA	0	NA	TRUE	NA	NA	NA	B	coding	1062	3189	376	3564	20.0	3681	False	AATAAA	-18
PB.9055.5	chr4	+	2347	6	full-splice_match	MSMO1	ENST00000261507.10	2269	6	63	-141	0	141	multi-exon	FALSE	canonical	1	591155	junction_1	251512.37333427553	NA	1	NA	TRUE	NA	NA	NA	C	coding	293	882	111	992	15.0	-34	True	AATAAA	-18
PB.6967.10	chr2	-	2672	18	full-splice_match	NDUFS1	ENST00000423725.5	2631	18	62	-103	-22	103	multi-exon	FALSE	canonical	1	18211	junction_16	266132.0946481654	NA	1	NA	TRUE	NA	NA	NA	C	coding	670	2013	191	2203	45.0	-23	True	NA	NA
PB.6829.3	chr2	-	4383	21	full-splice_match	TLK1	ENST00000431350.6	5663	21	43	1237	43	94	multi-exon	FALSE	canonical	1	68642	junction_15	120796.37118700006	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	363	2663	40.0	0	True	AATAAA	-18
PB.4413.3	chr16	+	3354	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	-25	4870	-25	580	multi-exon	TRUE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	119	2677	45.0	-29	True	NA	NA
PB.4413.2	chr16	+	4028	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	6	4165	6	1285	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	852	2559	88	2646	35.0	2	True	AATATA	-14
PB.4413.1	chr16	+	2951	1	genic	LONP2	novel	NA	NA	NA	NA	-29	-56066	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-7901	False	TTTAAA	-12
PB.4413.7	chr16	+	3805	17	novel_in_catalog	LONP2	novel	8199	15	NA	NA	-20	-170	intron_retention	FALSE	canonical	1	1100	junction_15	150015.8826976617	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	114	2834	75.0	-24	True	AAGAAA	-10
PB.4413.6	chr16	+	2683	15	full-splice_match	LONP2	ENST00000285737.8	8199	15	182	5334	90	116	multi-exon	FALSE	canonical	1	260164	junction_1	78110.30776317004	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	326	2470	15.0	-7690	False	AGTAAA	-29
PB.4413.5	chr16	+	4236	14	full-splice_match	LONP2	ENST00000535754.5	2580	14	-59	-1597	-22	1597	multi-exon	FALSE	canonical	1	32780	junction_2	135234.4715791864	NA	0	NA	TRUE	NA	NA	NA	C	coding	808	2427	116	2542	100.0	-26	True	NA	NA
PB.4413.4	chr16	+	2554	13	incomplete-splice_match	LONP2	ENST00000285737.8	8199	15	-23	9343	-23	390	3prime_fragment	FALSE	canonical	1	260164	junction_1	72242.04276077746	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	117	2294	30.0	-27	True	NA	NA
PB.4413.9	chr16	+	2632	14	incomplete-splice_match	LONP2	ENST00000285737.8	8199	15	-15	8872	-15	861	3prime_fragment	FALSE	canonical	1	260164	junction_1	75923.26378817312	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	109	2487	10.0	-19	True	AATAAA	-20
PB.4413.8	chr16	+	5232	16	novel_not_in_catalog	LONP2	novel	8199	15	NA	NA	-20	-1846	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	133906.2863010297	NA	3	1	TRUE	NA	NA	NA	C	coding	852	2559	114	2672	20.0	-24	True	NA	NA
PB.3027.26	chr12	-	1747	7	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	15	973	any annotated donor/acceptor	FALSE	canonical	1	8607	junction_1	236958.21133511892	NA	7	NA	TRUE	NA	NA	NA	C	coding	459	1380	1	1380	40.0	33	True	AATAAA	-18
PB.3027.27	chr12	-	1374	6	incomplete-splice_match	ANKLE2	ENST00000357997.9	4646	13	29	17691	29	45	3prime_fragment	FALSE	canonical	1	199099	junction_5	185179.42747011612	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1311	62	1372	65.0	230	False	NA	NA
PB.3027.24	chr12	-	2367	12	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	21652	junction_2	209075.61979693154	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	34	2076	25.0	0	True	ATTAAA	-13
PB.3027.25	chr12	-	2307	11	incomplete-splice_match	ANKLE2	ENST00000357997.9	4646	13	50	4392	-25	-172	3prime_fragment	FALSE	canonical	1	199099	junction_10	136738.0499905202	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2265	41	2305	55.0	-7	True	AATATA	-36
PB.3027.22	chr12	-	3052	14	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	32930	junction_3	231592.2136429875	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	51	1997	25.0	-3	True	ATTAAA	-13
PB.3027.23	chr12	-	2896	15	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	-19	0	any annotated donor/acceptor	FALSE	canonical	1	27	junction_9	279334.59673057444	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	35	1303	25.0	-1	True	ATTAAA	-13
PB.3027.20	chr12	-	2971	13	full-splice_match	ANKLE2	ENST00000357997.9	4646	13	47	1628	-28	2	multi-exon	FALSE	canonical	1	199099	junction_12	166418.7533713899	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	44	2860	20.0	4	True	ATTAAA	-15
PB.3027.21	chr12	-	3878	13	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-30	1	intron_retention	FALSE	canonical	1	32930	junction_3	240945.41422153875	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	46	1752	20.0	2	True	ATTAAA	-14
PB.11038.6	chr8	-	5998	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	-18	-12	combination_of_known_junctions	FALSE	canonical	1	84479	junction_5	104002.29838202162	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	207	1646	15.0	-19	True	AATAAA	-18
PB.11038.5	chr8	-	6071	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	-18	-11	combination_of_known_junctions	FALSE	canonical	1	86000	junction_2	94016.9585070147	NA	1	NA	TRUE	NA	NA	NA	C	coding	487	1464	255	1718	15.0	-19	True	AATAAA	-19
PB.11038.4	chr8	-	5769	13	novel_in_catalog	ENTPD4	novel	790	5	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	1	10397	junction_9	107835.23809970854	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	225	2003	10.0	11	True	AATAAA	-22
PB.858.5	chr1	-	1579	7	full-splice_match	SLAMF1	ENST00000302035.10	4006	7	402	2025	65	54	multi-exon	FALSE	canonical	1	217154	junction_3	24461.978631814178	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	33	956	60.0	150	False	AAAAAG	-3
PB.8917.3	chr4	-	3542	27	novel_in_catalog	TBCK	novel	8101	27	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	13845	junction_15	43464.65330677794	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	1793	3064	35.0	-1	True	AATAAA	-19
PB.11038.1	chr8	-	5811	13	full-splice_match	ENTPD4	ENST00000417069.6	2063	13	23	-3771	23	-3	multi-exon	FALSE	canonical	1	84479	junction_5	91039.78675873745	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	214	2040	10.0	22	False	AATAAA	-27
PB.7289.15	chr20	+	4838	30	full-splice_match	RALGAPB	ENST00000262879.10	8663	30	32	3793	32	-2	multi-exon	FALSE	canonical	1	102794	junction_1	51166.531505161925	NA	18	NA	TRUE	NA	NA	NA	C	coding	1494	4485	253	4737	35.0	1	True	AATAAA	-15
PB.7289.14	chr20	+	5348	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	31	-419	combination_of_known_junctions	FALSE	canonical	1	102794	junction_1	51383.9365020537	NA	0	NA	TRUE	NA	NA	NA	C	coding	1495	4488	254	4741	30.0	0	True	ATTAAA	-30
PB.7289.17	chr20	+	2138	3	incomplete-splice_match	RALGAPB	ENST00000397042.7	8652	30	32	84230	32	-5374	3prime_fragment	FALSE	canonical	1	102794	junction_1	58308.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	253	645	80.0	1	True	NA	NA
PB.7289.16	chr20	+	5479	30	full-splice_match	RALGAPB	ENST00000262879.10	8663	30	32	3152	32	-284	multi-exon	FALSE	canonical	1	102794	junction_1	51166.531505161925	NA	0	NA	TRUE	NA	NA	NA	C	coding	1494	4485	253	4737	40.0	1	True	AATAAA	-20
PB.7289.11	chr20	+	8454	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	29	-166	intron_retention	FALSE	canonical	1	79320	junction_15	54142.83126898372	NA	1	NA	TRUE	NA	NA	NA	C	coding	1490	4473	256	4728	10.0	-2	True	AGTAAA	-18
PB.7289.10	chr20	+	5335	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	28	-420	combination_of_known_junctions	FALSE	canonical	1	79320	junction_15	54142.83126898372	NA	0	NA	TRUE	NA	NA	NA	C	coding	1490	4473	257	4729	30.0	-3	True	ATTAAA	-29
PB.7289.12	chr20	+	5688	31	novel_not_in_catalog	RALGAPB	novel	8652	30	NA	NA	29	-158	any annotated donor/acceptor	FALSE	canonical	1	9970	junction_4	74647.35211233774	NA	1	NA	TRUE	NA	NA	NA	C	coding	1377	4134	687	4820	30.0	-2	True	ATTAAA	-38
PB.7193.3	chr20	+	2814	20	novel_in_catalog	SEC23B	novel	3484	20	NA	NA	4	-32	combination_of_known_junctions	FALSE	canonical	1	17071	junction_1	230479.87582429705	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	161	2464	55.0	-416	False	AATAAA	-24
PB.7289.19	chr20	+	5147	28	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	39	-421	no_combination_of_known_junctions	FALSE	canonical	1	4610	junction_26	67675.81524674369	NA	0	NA	TRUE	NA	NA	NA	C	coding	1322	3969	246	4214	30.0	8	True	ATTAAA	-28
PB.7289.18	chr20	+	7795	30	novel_in_catalog	RALGAPB	novel	8652	30	NA	NA	39	-21	intron_retention	FALSE	canonical	1	79320	junction_15	54142.83126898372	NA	1	NA	TRUE	NA	NA	NA	C	coding	1490	4473	246	4718	80.0	8	True	NA	NA
PB.2184.1	chr11	-	3360	7	full-splice_match	CLNS1A	ENST00000528364.1	953	7	-26	-2381	3	43	multi-exon	FALSE	canonical	1	36484	junction_1	481188.3747555513	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	89	802	15.0	-9	True	AATAAA	-18
PB.2184.2	chr11	-	1359	7	full-splice_match	CLNS1A	ENST00000525428.5	2993	7	11	1623	0	42	multi-exon	FALSE	canonical	1	649770	junction_6	307257.46497449913	NA	0	NA	TRUE	NA	NA	NA	C	coding	237	714	81	794	15.0	-1	True	AATAAA	-17
PB.11656.1	chr9	+	2198	4	novel_not_in_catalog	FAM120A	novel	5118	18	NA	NA	-28	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	375607.0552061911	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-21
PB.9431.10	chr5	+	3626	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	21	5	intron_retention	FALSE	non_canonical	0	0	junction_5	276102.04908518883	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4747	False	AATAAA	-19
PB.11747.7	chr9	+	3978	6	incomplete-splice_match	TMEM268	ENST00000374049.4	4578	9	15631	6	15379	-6	5prime_fragment	FALSE	canonical	1	118576	junction_1	25618.525422045663	NA	8	NA	TRUE	NA	NA	NA	C	coding	241	726	150	875	35.0	-71	False	NA	NA
PB.8629.16	chr3	-	2588	3	novel_in_catalog	NCBP2	novel	771	2	NA	NA	-12	0	intron_retention	FALSE	canonical	1	103249	junction_2	378995.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	309	299	607	5.0	-10	True	AATAAA	-13
PB.4047.1	chr15	+	2538	4	full-splice_match	SCAND2P	ENST00000348993.9	8975	4	12	6425	-3	494	multi-exon	TRUE	canonical	1	15219	junction_1	13048.459227902053	NA	3	NA	TRUE	NA	NA	NA	A	coding	152	459	438	896	25.0	-3	True	ATTAAA	-27
PB.1374.1	chr10	+	1902	2	incomplete-splice_match	HSD17B7P2	ENST00000471365.1	1033	9	-62	17991	13	-17991	3prime_fragment	FALSE	canonical	1	36346	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	84	255	63	317	95.0	0	True	NA	NA
PB.5541.1	chr19	-	3506	7	novel_not_in_catalog	SEPT14P19	novel	370	2	NA	NA	-50837	6237	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	6177.270963423538	NA	3	NA	TRUE	NA	NA	NA	A	coding	150	453	520	972	20.0	NA	False	AATAGA	-20
PB.2404.5	chr12	+	1264	11	full-splice_match	NDUFA9	ENST00000266544.9	8363	11	13	7086	1	-2	multi-exon	FALSE	canonical	1	476480	junction_4	276245.24811958306	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	8	1141	20.0	6	True	ATTAAA	-14
PB.2404.4	chr12	+	4210	11	novel_in_catalog	AC005832.4	novel	818	7	NA	NA	44173	24588	intron_retention	FALSE	canonical	1	5109	junction_5	461586.25032745505	NA	1	NA	TRUE	NA	NA	NA	B	coding	158	477	3611	4087	20.0	3	True	ATTAAA	-14
PB.6155.12	chr19	-	2651	3	full-splice_match	NUP62	ENST00000597029.5	2053	3	-52	-546	9	-16	multi-exon	FALSE	canonical	1	67824	junction_2	142093.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	522	1569	403	1971	100.0	-21	True	NA	NA
PB.2404.6	chr12	+	2573	11	novel_not_in_catalog	AC005832.4	novel	818	7	NA	NA	44181	24588	any annotated donor/acceptor	TRUE	canonical	1	3200	junction_3	389791.658492585	NA	0	NA	TRUE	NA	NA	NA	B	coding	158	477	1974	2450	20.0	11	True	ATTAAA	-14
PB.2404.1	chr12	+	4114	10	novel_in_catalog	AC005832.4	novel	818	7	NA	NA	44151	24588	intron_retention	FALSE	canonical	1	476480	junction_3	281467.5925993156	NA	0	NA	TRUE	NA	NA	NA	B	coding	158	477	3515	3991	20.0	-19	False	ATTAAA	-14
PB.6155.15	chr19	-	2602	3	full-splice_match	NUP62	ENST00000599560.5	562	3	260	-2300	1	-16	multi-exon	FALSE	canonical	1	15302	junction_2	168354.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	354	1922	100.0	3104	False	NA	NA
PB.2404.3	chr12	+	2524	11	full-splice_match	NDUFA9	ENST00000266544.9	8363	11	2	5837	2	1247	multi-exon	FALSE	canonical	1	476480	junction_4	276245.24811958306	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	19	1152	85.0	-5	True	NA	NA
PB.2404.2	chr12	+	1556	11	full-splice_match	NDUFA9	ENST00000266544.9	8363	11	-2	6809	-2	275	multi-exon	FALSE	canonical	1	476480	junction_4	276245.24811958306	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	23	1156	30.0	-9	True	NA	NA
PB.11063.3	chr8	+	2292	11	novel_not_in_catalog	HMBOX1	novel	3184	10	NA	NA	-70	0	any annotated donor/acceptor	FALSE	canonical	1	24660	junction_10	34878.431168847026	NA	0	NA	TRUE	NA	NA	NA	B	coding	406	1221	182	1402	100.0	-1190	False	NA	NA
PB.6155.19	chr19	-	2361	2	full-splice_match	NUP62	ENST00000422090.2	3479	2	227	891	-3	-173	multi-exon	FALSE	canonical	1	193034	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	270	1838	65.0	3090	False	NA	NA
PB.11063.1	chr8	+	2555	11	novel_not_in_catalog	HMBOX1	novel	3184	10	NA	NA	-23	-1	any annotated donor/acceptor	FALSE	canonical	1	6967	junction_10	43639.67052762887	NA	0	NA	TRUE	NA	NA	NA	B	coding	383	1152	366	1517	95.0	-24	True	NA	NA
PB.11125.5	chr8	+	2603	4	full-splice_match	UBE2V2	ENST00000523111.6	4373	4	31	1739	-11	1399	multi-exon	FALSE	canonical	1	699726	junction_1	68940.94818192032	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	25	462	30.0	0	True	ATTAAA	-25
PB.11797.1	chr9	+	4309	25	novel_not_in_catalog	GARNL3	novel	905	11	NA	NA	-9	-1747	any annotated donor/acceptor	FALSE	canonical	1	4012	junction_24	16129.467902928396	NA	0	NA	TRUE	NA	NA	NA	B	coding	783	2352	83	2434	75.0	-4	True	NA	NA
PB.11063.5	chr8	+	4318	9	incomplete-splice_match	HMBOX1	ENST00000519047.5	1551	10	-236	-27	-5	-1	intron_retention	FALSE	canonical	1	32558	junction_8	32005.55979337809	NA	0	NA	TRUE	NA	NA	NA	B	coding	395	1188	348	1535	95.0	-6	True	NA	NA
PB.11063.4	chr8	+	2244	11	novel_in_catalog	HMBOX1	novel	3184	10	NA	NA	-84	-1	combination_of_known_junctions	FALSE	canonical	1	14381	junction_10	36908.47580285591	NA	0	NA	TRUE	NA	NA	NA	B	coding	444	1335	196	1530	75.0	0	True	GATAAA	-31
PB.7559.1	chr21	+	3108	1	antisense	novelGene_PTTG1IP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	331	996	159	1154	70.0	-1	True	NA	NA
PB.6829.7	chr2	-	2619	21	full-splice_match	TLK1	ENST00000431350.6	5663	21	301	2743	32	-59	multi-exon	FALSE	canonical	1	68642	junction_15	120796.37118700006	NA	1	NA	TRUE	NA	NA	NA	C	coding	766	2301	105	2405	40.0	2	True	AATAAA	-18
PB.7559.2	chr21	+	1821	1	intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-7554	False	NA	NA
PB.11747.5	chr9	+	4522	9	novel_in_catalog	TMEM268	novel	2314	9	NA	NA	8	-7	intron_retention	FALSE	canonical	1	11374	junction_2	60082.27812745098	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	455	1420	30.0	10	True	NA	NA
PB.7057.18	chr2	+	1879	14	full-splice_match	SP100	ENST00000409824.5	1802	14	-39	-38	-20	-3	multi-exon	FALSE	canonical	1	40055	junction_1	204673.16180650023	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	97	1464	30.0	-19	True	NA	NA
PB.8025.6	chr3	+	3704	19	full-splice_match	WDR48	ENST00000302313.9	3707	19	3	0	3	0	multi-exon	FALSE	canonical	1	228842	junction_17	43872.82988593986	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	26	2059	70.0	-15	True	NA	NA
PB.4057.1	chr15	-	5836	3	novel_in_catalog	MRPL46	novel	1019	4	NA	NA	-9	0	intron_retention	FALSE	canonical	1	511921	junction_2	46290.5	NA	6	NA	TRUE	NA	NA	NA	A	coding	203	612	23	634	10.0	-12	True	AATAAA	-15
PB.7057.10	chr2	+	1735	14	full-splice_match	SP100	ENST00000409824.5	1802	14	-51	118	-32	11	multi-exon	FALSE	canonical	1	40055	junction_1	204673.16180650023	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	109	1476	25.0	-56	False	AATAAA	-28
PB.7057.11	chr2	+	5327	28	novel_in_catalog	SP100	novel	3882	25	NA	NA	-30	1494	combination_of_known_junctions	FALSE	canonical	1	40055	junction_1	287458.3379295335	NA	7	NA	TRUE	NA	NA	NA	C	coding	860	2583	107	2689	70.0	-54	False	AATAAA	-10
PB.7057.12	chr2	+	1842	20	incomplete-splice_match	SP100	ENST00000409112.5	2198	23	-65	5055	-20	-3675	3prime_fragment	FALSE	canonical	1	98698	junction_15	233249.8529235878	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1746	97	1842	70.0	-19	True	AAGAAA	-20
PB.7057.13	chr2	+	3621	25	full-splice_match	SP100	ENST00000264052.9	3882	25	259	2	-20	-2	multi-exon	FALSE	canonical	1	46376	junction_24	271806.27385279955	NA	1	NA	TRUE	NA	NA	NA	C	coding	879	2640	97	2736	30.0	-19	True	NA	NA
PB.7057.14	chr2	+	5424	29	full-splice_match	SP100	ENST00000340126.8	2926	29	-65	-2433	-20	1526	multi-exon	FALSE	canonical	1	98698	junction_15	276768.5555113155	NA	2	NA	TRUE	NA	NA	NA	C	coding	885	2658	97	2754	35.0	-19	True	AATAAA	-42
PB.6438.1	chr2	+	3715	2	antisense	novelGene_AC098824.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	103	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	117	354	722	1075	90.0	NA	False	NA	NA
PB.7057.16	chr2	+	2182	4	incomplete-splice_match	SP100	ENST00000432979.5	654	6	-20	840	-20	-840	3prime_fragment	FALSE	canonical	1	40055	junction_1	277715.84321748733	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	97	576	85.0	-19	True	NA	NA
PB.7057.17	chr2	+	2063	22	novel_in_catalog	SP100	novel	3882	25	NA	NA	-20	-125	no_combination_of_known_junctions	FALSE	canonical	1	17205	junction_18	266053.65183226386	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1965	97	2061	55.0	-19	True	NA	NA
PB.5050.1	chr17	-	3474	15	full-splice_match	PLCD3	ENST00000619929.4	6107	15	-50	2683	-30	653	multi-exon	TRUE	canonical	1	126486	junction_14	80153.56801576685	NA	0	NA	TRUE	NA	NA	NA	A	coding	789	2370	139	2508	20.0	-9	True	AATAAA	-17
PB.9097.3	chr4	+	3374	19	full-splice_match	SNX25	ENST00000264694.12	3264	19	-105	-5	-105	0	multi-exon	FALSE	canonical	1	13066	junction_1	98670.2585982195	NA	0	NA	TRUE	NA	NA	NA	C	coding	840	2523	346	2868	30.0	NA	False	AATAAA	-19
PB.11656.2	chr9	+	1762	4	novel_not_in_catalog	FAM120A	novel	5118	18	NA	NA	-27	-433	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	375607.0552061911	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	1	True	NA	NA
PB.357.4	chr1	+	3441	1	genic	IPO13	novel	NA	NA	NA	NA	-17	817	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	311	936	2301	3236	30.0	-44	True	NA	NA
PB.11889.8	chr9	-	2548	6	incomplete-splice_match	BRD3	ENST00000303407.11	5652	12	-33	16535	-33	1162	3prime_fragment	FALSE	canonical	1	108094	junction_5	49118.31143921786	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	220	1647	55.0	5	True	AATAAA	-11
PB.357.7	chr1	+	3641	20	novel_in_catalog	IPO13	novel	3894	20	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	1	1487	junction_1	112319.70784776956	NA	1	1	TRUE	NA	NA	NA	C	coding	978	2937	636	3572	5.0	0	True	AGTAAA	-11
PB.6910.6	chr2	-	4221	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	88	1	6	-1	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	301	2553	35.0	-3	True	ATTAAA	-14
PB.1289.22	chr10	+	2195	1	incomplete-splice_match	CELF2	ENST00000631460.1	5538	14	326836	4	166674	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-707	False	ATTAAA	-11
PB.1289.20	chr10	+	1783	1	novel_in_catalog	CELF2	novel	2724	15	NA	NA	0	-147523	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	91	276	22	297	70.0	0	True	NA	NA
PB.357.6	chr1	+	3766	18	novel_in_catalog	IPO13	novel	3894	20	NA	NA	27	0	intron_retention	FALSE	canonical	1	150030	junction_1	94354.97698401488	NA	22	NA	TRUE	NA	NA	NA	C	coding	554	1665	636	2300	5.0	0	True	AGTAAA	-12
PB.9990.3	chr6	-	2129	8	novel_not_in_catalog	MRPS10	novel	2110	7	NA	NA	4	-7	any annotated donor/acceptor	FALSE	canonical	1	7494	junction_7	171201.96651717217	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	13	648	20.0	-1	True	ATTAAA	-25
PB.1140.18	chr1	+	2501	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	10	224	10	68	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2337	164	2500	45.0	-16	True	NA	NA
PB.8344.4	chr3	-	5094	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	-3	-1638	intron_retention	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	80	1696	15.0	-12	True	NA	NA
PB.357.1	chr1	+	3609	20	full-splice_match	IPO13	ENST00000372343.7	3894	20	15	270	15	0	multi-exon	FALSE	canonical	1	150030	junction_1	92689.30195424143	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2892	648	3539	5.0	-12	True	AGTAAA	-12
PB.1140.17	chr1	+	3003	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	58	-326	-33	2	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	116	2473	20.0	-509	False	CATAAA	-22
PB.1140.16	chr1	+	4807	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	27	-2099	27	-90	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2358	147	2504	15.0	1	True	AGTAAA	-17
PB.1140.13	chr1	+	4731	22	novel_in_catalog	MIA3	novel	8142	28	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	50489	junction_3	164702.5219140774	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	182	2104	15.0	-34	True	CATAAA	-19
PB.1140.12	chr1	+	2643	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	-31	123	-31	-123	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	205	2562	45.0	-598	False	AGTAAA	-20
PB.1126.1	chr1	+	3189	1	incomplete-splice_match	RRP15	ENST00000366932.3	7771	5	49506	2	49451	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	3101	False	AATAAA	-19
PB.11279.1	chr8	-	3562	6	novel_in_catalog	NCALD	novel	3655	7	NA	NA	3	0	intron_retention	FALSE	canonical	1	12064	junction_5	84807.54618310802	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	215	796	25.0	-68	False	ATTAAA	-22
PB.11279.2	chr8	-	3808	7	novel_not_in_catalog	NCALD	novel	3655	7	NA	NA	27451	-1	intron_retention	FALSE	canonical	1	4206	junction_6	93225.19793966055	NA	12	NA	TRUE	NA	NA	NA	C	coding	193	582	462	1043	25.0	1267	False	ATTAAA	-21
PB.11279.3	chr8	-	3482	4	full-splice_match	NCALD	ENST00000220931.10	3283	4	-16	-183	0	-1	multi-exon	FALSE	canonical	1	87334	junction_3	63606.13228996784	NA	2	NA	TRUE	NA	NA	NA	C	coding	193	582	136	717	25.0	-9	True	ATTAAA	-21
PB.11279.4	chr8	-	3786	6	novel_not_in_catalog	NCALD	novel	3655	7	NA	NA	27412	-6	intron_retention	FALSE	canonical	1	4206	junction_5	86844.13669926139	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	445	1026	35.0	1228	False	ATTAAA	-16
PB.11279.5	chr8	-	3356	6	novel_in_catalog	NCALD	novel	3655	7	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	8909	junction_4	100955.26362701452	NA	2	1	TRUE	NA	NA	NA	C	coding	193	582	198	779	30.0	-5	True	AATAAA	-25
PB.11279.6	chr8	-	3599	6	novel_not_in_catalog	NCALD	novel	3655	7	NA	NA	27415	-6	intron_retention	FALSE	canonical	1	4206	junction_5	86844.13669926139	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	442	1023	25.0	1231	False	AATAAA	-24
PB.11279.7	chr8	-	3320	6	novel_in_catalog	NCALD	novel	3655	7	NA	NA	-5	-69	combination_of_known_junctions	FALSE	canonical	1	12064	junction_5	84807.54618310802	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	226	807	45.0	-79	False	AATAAA	-15
PB.454.11	chr1	-	2738	5	novel_in_catalog	JAK1	novel	5047	25	NA	NA	-45	1626	combination_of_known_junctions	FALSE	canonical	1	6878	junction_1	236045.79065551562	NA	2	NA	TRUE	NA	NA	NA	C	coding	129	390	295	684	20.0	-1	True	NA	NA
PB.454.12	chr1	-	3462	1	intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	106	321	1699	2019	45.0	9339	False	NA	NA
PB.11668.1	chr9	-	2897	6	full-splice_match	PRXL2C	ENST00000375234.7	2863	6	-38	4	-16	-4	multi-exon	FALSE	canonical	1	88919	junction_1	49382.72832316984	NA	2	NA	TRUE	NA	NA	NA	C	coding	226	681	39	719	20.0	-3	True	AATAAA	-17
PB.6233.1	chr19	+	2408	3	full-splice_match	ZNF71	ENST00000328070.10	5428	3	-30	3050	6	-1035	multi-exon	FALSE	canonical	1	39310	junction_1	10940.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	265	1734	35.0	0	True	AATAAA	-18
PB.1217.7	chr1	-	1702	1	antisense	novelGene_TBCE_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-704	False	AATAAA	-16
PB.6233.3	chr19	+	2115	1	novel_in_catalog	ZNF71	novel	3576	4	NA	NA	10	-13155	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	4	True	NA	NA
PB.6233.2	chr19	+	2306	3	novel_not_in_catalog	ZNF71	novel	3576	4	NA	NA	6	-1035	any annotated donor/acceptor	FALSE	canonical	1	6502	junction_1	27344.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	163	1632	35.0	0	True	AATAAA	-18
PB.1217.2	chr1	-	4553	12	full-splice_match	B3GALNT2	ENST00000366600.7	2015	12	164	-2702	-63	2702	multi-exon	FALSE	canonical	1	58338	junction_11	53693.27728160826	NA	2	NA	TRUE	NA	NA	NA	C	coding	500	1503	66	1568	35.0	134	False	AATAAA	-16
PB.6233.4	chr19	+	3107	3	full-splice_match	ZNF71	ENST00000328070.10	5428	3	-1	2322	-1	-307	multi-exon	FALSE	canonical	1	39310	junction_1	10940.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	489	1470	236	1705	75.0	-3	True	NA	NA
PB.11797.2	chr9	+	3581	30	novel_in_catalog	GARNL3	novel	905	11	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	6960	junction_1	14636.658249526645	NA	0	NA	TRUE	NA	NA	NA	B	coding	1076	3231	70	3300	20.0	9	True	AATAAA	-16
PB.1217.1	chr1	-	4834	13	novel_in_catalog	B3GALNT2	novel	2015	12	NA	NA	6	2702	intron_retention	FALSE	canonical	1	4942	junction_11	74085.06012737243	NA	2	NA	TRUE	NA	NA	NA	C	coding	541	1626	224	1849	35.0	-24	True	AATAAA	-16
PB.336.9	chr1	-	5224	13	full-splice_match	FOXJ3	ENST00000361346.5	5225	13	-3	4	-3	-4	multi-exon	FALSE	canonical	1	110404	junction_12	81061.5742803306	NA	0	NA	TRUE	NA	NA	NA	C	coding	622	1869	195	2063	30.0	-4	True	AATAAA	-18
PB.1217.8	chr1	-	2953	12	full-splice_match	B3GALNT2	ENST00000366600.7	2015	12	9	-947	9	947	multi-exon	FALSE	canonical	1	58338	junction_11	53693.27728160826	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	221	1723	45.0	-21	True	AATAAA	-17
PB.1217.9	chr1	-	1950	12	full-splice_match	B3GALNT2	ENST00000366600.7	2015	12	56	9	0	-9	multi-exon	FALSE	canonical	1	58338	junction_11	53693.27728160826	NA	1	1	TRUE	NA	NA	NA	C	coding	500	1503	174	1676	25.0	26	True	TATAAA	-16
PB.1022.4	chr1	+	4877	33	full-splice_match	PTPRC	ENST00000442510.7	5390	33	33	480	-6	-287	multi-exon	FALSE	canonical	1	197273	junction_3	370576.94417771033	NA	0	NA	TRUE	NA	NA	NA	C	coding	1306	3921	142	4062	65.0	-55	True	AATAAA	-8
PB.1022.5	chr1	+	4990	32	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	1	197273	junction_3	369380.10007643147	NA	1	NA	TRUE	NA	NA	NA	C	coding	1258	3777	115	3891	30.0	-28	True	AATAAA	-28
PB.9210.20	chr5	-	2934	9	novel_not_in_catalog	HMGCS1	novel	3506	11	NA	NA	-3	-1360	intron_retention	FALSE	canonical	1	33990	junction_7	465363.1593438613	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	1587	2558	35.0	0	True	ATTAAA	-16
PB.9210.21	chr5	-	2064	11	full-splice_match	HMGCS1	ENST00000325110.10	3506	11	82	1360	62	-1360	multi-exon	FALSE	canonical	1	372008	junction_10	354266.130998491	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	126	1688	35.0	0	True	ATTAAA	-16
PB.9210.22	chr5	-	1706	3	novel_not_in_catalog	HMGCS1	novel	3506	11	NA	NA	61	159	intron_retention	FALSE	non_canonical	0	0	junction_1	209001.0	NA	1	1	TRUE	NA	NA	NA	C	coding	164	495	68	562	80.0	-1	True	NA	NA
PB.8025.1	chr3	+	2535	19	full-splice_match	WDR48	ENST00000302313.9	3707	19	10	1162	-5	148	multi-exon	FALSE	canonical	1	228842	junction_17	43872.82988593986	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	19	2052	30.0	-8	True	TATAAA	-15
PB.1022.6	chr1	+	4691	31	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-6	-82	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	349674.0612626183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	93	3671	25.0	-6	True	ATTAAA	-19
PB.9990.1	chr6	-	2225	7	full-splice_match	MRPS10	ENST00000053468.3	2110	7	-10	-105	-10	105	multi-exon	TRUE	canonical	1	100765	junction_5	142603.64289925728	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	27	632	40.0	-15	True	AATAAA	-20
PB.1022.7	chr1	+	4549	31	novel_in_catalog	PTPRC	novel	731	7	NA	NA	-5	-272	combination_of_known_junctions	FALSE	canonical	1	232114	junction_4	349674.0612626183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	141	3719	40.0	-54	True	AATAAA	-23
PB.11884.2	chr9	+	2584	4	full-splice_match	CACFD1	ENST00000291722.11	2688	4	33	71	2	-10	multi-exon	FALSE	canonical	1	22609	junction_2	61882.90595597104	NA	13	NA	TRUE	NA	NA	NA	C	coding	130	393	68	460	0.0	-14	True	AATAAA	-33
PB.8648.10	chr4	-	4070	24	novel_in_catalog	GAK	novel	2281	2	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	2166	junction_23	130999.1789363438	NA	0	NA	TRUE	NA	NA	NA	C	coding	1087	3264	412	3675	10.0	9	True	ATTAAA	-14
PB.11884.1	chr9	+	2727	5	full-splice_match	CACFD1	ENST00000316948.8	2794	5	-1	68	-1	-7	multi-exon	FALSE	canonical	1	89231	junction_2	33134.39121498236	NA	2	NA	TRUE	NA	NA	NA	C	coding	172	519	82	600	0.0	-28	True	AATAAA	-36
PB.8648.15	chr4	-	4145	25	novel_in_catalog	GAK	novel	2281	2	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	5648	junction_23	132235.0319919084	NA	0	NA	TRUE	NA	NA	NA	C	coding	1205	3618	134	3751	10.0	-5	True	ATTAAA	-13
PB.8648.14	chr4	-	4444	28	novel_not_in_catalog	GAK	novel	2281	2	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	1762	junction_3	139732.7553456538	NA	0	NA	TRUE	NA	NA	NA	C	coding	1163	3492	131	3622	10.0	-2	True	ATTAAA	-13
PB.8648.17	chr4	-	4236	11	incomplete-splice_match	GAK	ENST00000314167.8	4442	28	-19	36668	0	-163	3prime_fragment	FALSE	canonical	1	107040	junction_6	99769.1060968274	NA	4	NA	TRUE	NA	NA	NA	C	coding	402	1209	131	1339	60.0	-2	True	NA	NA
PB.8648.16	chr4	-	4500	28	novel_not_in_catalog	GAK	novel	2281	2	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	469	junction_7	134760.00238430276	NA	2	NA	TRUE	NA	NA	NA	C	coding	1325	3978	131	4108	15.0	-2	True	ATTAAA	-11
PB.8430.2	chr3	-	4760	23	novel_not_in_catalog	COPB2	novel	433	4	NA	NA	1	1654	any annotated donor/acceptor	FALSE	canonical	1	1082	junction_1	442638.95766438916	NA	5	NA	TRUE	NA	NA	NA	C	coding	877	2634	256	2889	15.0	3	True	AATAAA	-16
PB.8430.3	chr3	-	4708	23	novel_not_in_catalog	COPB2	novel	433	4	NA	NA	0	1650	any annotated donor/acceptor	FALSE	canonical	1	1082	junction_1	365363.55026522995	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	121	2841	20.0	-28	True	AATAAA	-12
PB.8430.1	chr3	-	6758	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	64	-3462	2	1656	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	119	2839	10.0	-26	True	AATAAA	-18
PB.8430.6	chr3	-	3786	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	86	-512	0	512	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	97	2817	50.0	-4	True	ATTAAA	-12
PB.9579.13	chr5	+	2087	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	11	705	0	420	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	133	1533	55.0	0	True	TTTAAA	-6
PB.8430.4	chr3	-	3917	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	107	-664	1	664	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	76	2796	60.0	1	True	AATAAA	-14
PB.8430.5	chr3	-	4028	23	novel_in_catalog	COPB2	novel	433	4	NA	NA	0	523	combination_of_known_junctions	FALSE	canonical	1	61264	junction_22	429963.8544837373	NA	0	NA	TRUE	NA	NA	NA	C	coding	877	2634	415	3048	40.0	-38	False	ATTAAA	-23
PB.7786.3	chr22	+	3255	7	novel_in_catalog	APOBEC3A	novel	1103	5	NA	NA	24880	0	intron_retention	FALSE	canonical	1	75139	junction_1	57839.35088674492	NA	1	NA	TRUE	NA	NA	NA	A	coding	261	786	53	838	30.0	2	True	AATAAA	-38
PB.8430.8	chr3	-	3229	22	full-splice_match	COPB2	ENST00000333188.9	3360	22	84	47	0	-47	multi-exon	FALSE	canonical	1	930352	junction_21	249035.40392089906	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	99	2819	30.0	-6	True	ACTAAA	-22
PB.9579.12	chr5	+	2340	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	43	7857	1	-421	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	103	1503	60.0	-1	True	NA	NA
PB.8914.1	chr4	-	2167	7	full-splice_match	INTS12	ENST00000451321.6	1975	7	420	-612	-5	612	multi-exon	FALSE	canonical	1	57803	junction_6	82244.5299607957	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	61	1449	20.0	-24	True	AATAAA	-17
PB.5718.17	chr19	+	4481	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	2	-313	no_combination_of_known_junctions	FALSE	canonical	1	19211	junction_15	174808.55266868693	NA	5	NA	TRUE	NA	NA	NA	C	coding	834	2505	85	2589	70.0	2	True	NA	NA
PB.1154.2	chr1	+	2418	12	incomplete-splice_match	DNAH14	ENST00000430092.5	13763	84	45	359686	-16	14979	3prime_fragment	FALSE	canonical	1	8659	junction_11	47008.232430585325	NA	0	NA	TRUE	NA	NA	NA	B	coding	498	1497	171	1667	70.0	-81	False	AATAAA	-23
PB.1154.1	chr1	+	3135	6	incomplete-splice_match	DNAH14	ENST00000366850.7	1103	7	-28	-1908	-21	2	intron_retention	FALSE	canonical	1	59407	junction_1	24326.24952104208	NA	0	NA	TRUE	NA	NA	NA	B	coding	239	720	237	956	20.0	2	True	NA	NA
PB.5718.14	chr19	+	3823	17	novel_in_catalog	LDLR	novel	3617	18	NA	NA	1	386	no_combination_of_known_junctions	FALSE	canonical	1	19211	junction_15	174808.55266868693	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	86	2590	70.0	1	True	NA	NA
PB.11265.1	chr8	-	5294	1	novel_in_catalog	AC104986.2	novel	380	2	NA	NA	15	-10973	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.5718.15	chr19	+	3570	16	full-splice_match	LDLR	ENST00000455727.6	2333	16	1	-1238	1	559	multi-exon	FALSE	canonical	1	103	junction_3	167074.97726145454	NA	1	NA	TRUE	NA	NA	NA	C	coding	692	2079	86	2164	95.0	1	True	NA	NA
PB.10738.2	chr7	-	2641	1	full-splice_match	UFSP1	ENST00000388761.3	996	1	26	-1671	26	1671	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	142	429	422	850	45.0	22	True	NA	NA
PB.8462.4	chr3	-	3688	5	full-splice_match	COMMD2	ENST00000473414.5	3706	5	11	7	1	-7	multi-exon	FALSE	canonical	1	232661	junction_4	82845.13778845141	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	45	644	35.0	0	True	NA	NA
PB.9579.19	chr5	+	2647	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	10	146	1	-145	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	134	1534	5.0	-1	True	NA	NA
PB.9579.18	chr5	+	2783	12	full-splice_match	G3BP1	ENST00000394123.7	10240	12	43	7414	1	21	multi-exon	FALSE	canonical	1	340134	junction_1	302223.83235190285	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	103	1503	25.0	-1	True	ATTAAA	-40
PB.6581.5	chr2	+	7822	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	0	-4343	0	4343	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	3	NA	TRUE	NA	NA	NA	C	coding	292	879	26	904	25.0	0	True	NA	NA
PB.9854.3	chr6	-	5739	14	novel_in_catalog	MDC1	novel	7576	15	NA	NA	0	16	intron_retention	FALSE	canonical	1	14545	junction_13	122720.22644532929	NA	3	1	TRUE	NA	NA	NA	C	coding	1825	5478	96	5573	10.0	-1	True	AATAAA	-26
PB.6581.7	chr2	+	1063	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	11	2405	0	325	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	15	893	55.0	11	True	AATAAA	-24
PB.8481.1	chr3	-	1825	5	full-splice_match	C3orf33	ENST00000534941.2	1804	5	-15	-6	-15	5	multi-exon	FALSE	canonical	1	30649	junction_4	13180.69326704783	NA	0	NA	TRUE	NA	NA	NA	A	coding	294	885	36	920	25.0	-20	True	AATAAA	-24
PB.8961.9	chr4	-	4193	11	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-5	28	intron_retention	FALSE	canonical	1	3552814	junction_8	1247295.348302835	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	154	882	25.0	-1	True	AATAAA	-17
PB.8961.8	chr4	-	6759	10	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-5	28	intron_retention	FALSE	canonical	1	3552814	junction_7	1181222.710890094	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	154	561	25.0	-1	True	AATAAA	-17
PB.6581.3	chr2	+	1281	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	2	2196	2	534	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	24	902	50.0	2	True	NA	NA
PB.6581.2	chr2	+	4102	6	full-splice_match	MRPL19	ENST00000393909.6	3479	6	-4	-619	-4	619	multi-exon	FALSE	canonical	1	335211	junction_3	185966.5699430949	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	30	908	20.0	-4	True	NA	NA
PB.8961.5	chr4	-	4782	12	novel_in_catalog	ANXA5	novel	1762	13	NA	NA	-5	29	intron_retention	FALSE	canonical	1	3552814	junction_9	1210380.0394227665	NA	4	NA	TRUE	NA	NA	NA	C	coding	135	408	174	581	20.0	-21	True	AATAAA	-18
PB.8961.4	chr4	-	1551	13	full-splice_match	ANXA5	ENST00000296511.9	1762	13	130	81	-8	-9	multi-exon	FALSE	canonical	1	3552814	junction_10	1161797.301360937	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	157	1119	70.0	-4	True	ACTAAA	-32
PB.8961.6	chr4	-	1542	13	novel_not_in_catalog	ANXA5	novel	1762	13	NA	NA	1	28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	1840800.1561836782	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	111	1073	25.0	5	True	AATAAA	-17
PB.8961.1	chr4	-	2532	13	full-splice_match	ANXA5	ENST00000296511.9	1762	13	130	-900	-8	900	multi-exon	FALSE	canonical	1	3552814	junction_10	1161797.301360937	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	157	1119	75.0	-4	True	AATAAA	-7
PB.9854.1	chr6	-	7062	15	novel_in_catalog	MDC1	novel	7576	15	NA	NA	-40	-1	intron_retention	FALSE	canonical	1	14545	junction_14	119681.96059942979	NA	0	NA	TRUE	NA	NA	NA	C	coding	2089	6270	136	6405	15.0	-7	True	AATAAA	-18
PB.8961.3	chr4	-	2006	13	full-splice_match	ANXA5	ENST00000296511.9	1762	13	121	-365	0	365	multi-exon	FALSE	canonical	1	3552814	junction_10	1161797.301360937	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	166	1128	40.0	-13	True	AATAAA	-22
PB.8961.2	chr4	-	2199	13	full-splice_match	ANXA5	ENST00000296511.9	1762	13	118	-555	0	555	multi-exon	FALSE	canonical	1	3552814	junction_10	1161797.301360937	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	169	1131	45.0	-16	True	AATAAA	-28
PB.8309.1	chr3	+	3942	9	novel_in_catalog	QTRT2	novel	680	5	NA	NA	-2	-6	combination_of_known_junctions	TRUE	canonical	1	10108	junction_7	55517.3327799526	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	96	1034	30.0	-27	True	AATAAA	-14
PB.490.23	chr1	+	2685	1	novel_in_catalog	IFI44L	novel	554	3	NA	NA	374	-4680	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-2585	False	NA	NA
PB.11458.1	chr9	-	6651	44	novel_in_catalog	MPDZ	novel	7722	47	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	15862	junction_10	45599.60312687256	NA	1	NA	TRUE	NA	NA	NA	B	coding	1972	5919	266	6184	70.0	12	True	NA	NA
PB.8462.3	chr3	-	3825	6	full-splice_match	COMMD2	ENST00000491617.5	885	6	-21	-2919	2	-1	multi-exon	FALSE	canonical	1	22516	junction_1	156168.74719277222	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	50	457	20.0	-5	True	NA	NA
PB.839.4	chr1	+	5441	15	novel_in_catalog	KIRREL1	novel	3304	13	NA	NA	35	-2054	combination_of_known_junctions	FALSE	canonical	1	90235	junction_8	67137.29543332856	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	33	2354	15.0	0	True	NA	NA
PB.6859.2	chr2	+	1267	10	full-splice_match	MTX2	ENST00000249442.10	1364	10	10	87	10	-87	multi-exon	FALSE	canonical	1	365376	junction_1	168734.84389010258	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	202	993	20.0	-13	True	AATAAA	-19
PB.839.5	chr1	+	5392	15	full-splice_match	KIRREL1	ENST00000359209.10	2874	15	35	-2553	35	-2055	multi-exon	FALSE	canonical	1	79607	junction_8	68626.02956441171	NA	3	1	TRUE	NA	NA	NA	C	coding	757	2274	33	2306	10.0	0	True	NA	NA
PB.1121.10	chr1	+	6302	13	incomplete-splice_match	CENPF	ENST00000366955.7	10307	20	49	18835	49	-7740	3prime_fragment	FALSE	canonical	1	223700	junction_1	41938.66565858077	NA	0	NA	TRUE	NA	NA	NA	C	coding	2061	6183	120	6302	55.0	6	True	NA	NA
PB.10865.12	chr7	-	2166	11	full-splice_match	CNOT4	ENST00000315544.6	3783	11	26	1591	-10	-1591	multi-exon	FALSE	canonical	1	52290	junction_4	66201.47488394802	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	306	2033	25.0	0	True	TATAAA	-17
PB.12277.17	chrX	-	4028	9	novel_not_in_catalog	FAM122B	novel	4246	9	NA	NA	-18	-303	intron_retention	FALSE	canonical	1	31461	junction_7	142065.84644095277	NA	0	NA	TRUE	NA	NA	NA	C	coding	252	759	1001	1759	30.0	-2	True	AATAAA	-19
PB.12277.16	chrX	-	2380	11	novel_in_catalog	FAM122B	novel	4246	9	NA	NA	-18	-302	combination_of_known_junctions	FALSE	canonical	1	5370	junction_10	169646.61211132392	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	236	964	30.0	-2	True	AATAAA	-20
PB.12277.15	chrX	-	3228	10	novel_in_catalog	FAM122B	novel	4246	9	NA	NA	-17	-302	intron_retention	FALSE	canonical	1	14666	junction_1	144811.0598439767	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	1000	1812	30.0	-1	True	AATAAA	-20
PB.10865.13	chr7	-	2198	10	incomplete-splice_match	CNOT4	ENST00000428680.6	4642	11	-25	7492	-10	-6573	3prime_fragment	FALSE	canonical	1	98148	junction_3	49891.389664122245	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	306	1937	75.0	0	True	NA	NA
PB.12277.13	chrX	-	2812	11	novel_not_in_catalog	FAM122B	novel	4246	9	NA	NA	-14	-7	any annotated donor/acceptor	FALSE	canonical	1	5370	junction_10	183862.4841646876	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	277	1101	40.0	-1	True	AATAAA	-17
PB.12277.11	chrX	-	2683	11	full-splice_match	FAM122B	ENST00000298090.10	2706	11	17	6	17	-6	multi-exon	FALSE	canonical	1	5370	junction_10	171603.35638573623	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	246	971	40.0	-12	True	AATAAA	-18
PB.12277.10	chrX	-	2911	10	novel_not_in_catalog	FAM122B	novel	4246	9	NA	NA	8	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	166801.32390095442	NA	2	NA	TRUE	NA	NA	NA	C	coding	223	672	523	1194	30.0	56	True	AATAAA	-23
PB.10865.14	chr7	-	2774	7	incomplete-splice_match	CNOT4	ENST00000315544.6	3783	11	-8	21831	-8	13320	3prime_fragment	FALSE	canonical	1	129310	junction_6	41705.80864686463	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	340	1164	30.0	-34	False	AATAAA	-29
PB.9854.4	chr6	-	6475	15	full-splice_match	MDC1	ENST00000376406.7	7576	15	608	493	-106	15	multi-exon	FALSE	canonical	1	70356	junction_7	113271.05277645623	NA	0	NA	TRUE	NA	NA	NA	C	coding	2089	6270	41	6310	10.0	-8	True	AATAAA	-25
PB.11425.8	chr9	+	4093	4	full-splice_match	SMARCA2	ENST00000636559.1	6853	4	1	2759	1	308	multi-exon	FALSE	canonical	1	152319	junction_1	109323.62918214688	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	121	933	30.0	1	True	AATAAA	-17
PB.8309.4	chr3	+	3912	10	full-splice_match	QTRT2	ENST00000281273.8	4023	10	33	78	-12	-5	multi-exon	FALSE	canonical	1	49685	junction_2	47121.52795108033	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	225	1472	30.0	-12	True	AATAAA	-15
PB.1928.4	chr11	+	5593	32	novel_not_in_catalog	MADD	novel	437	3	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	66	junction_10	124866.88802231236	NA	0	NA	TRUE	NA	NA	NA	C	coding	1476	4431	154	4584	5.0	15	True	NA	NA
PB.8309.7	chr3	+	3866	9	full-splice_match	QTRT2	ENST00000485050.5	3844	9	49	-71	2	-2	multi-exon	FALSE	canonical	1	90568	junction_1	33793.39348434099	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	103	1350	30.0	2	True	ATTAAA	-17
PB.9990.5	chr6	-	1504	7	full-splice_match	MRPS10	ENST00000053468.3	2110	7	2	604	2	-604	multi-exon	FALSE	canonical	1	100765	junction_5	142603.64289925728	NA	1	1	TRUE	NA	NA	NA	C	coding	201	606	15	620	70.0	-3	True	NA	NA
PB.1928.3	chr11	+	5816	33	novel_in_catalog	MADD	novel	437	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	22064	junction_1	100904.32650301643	NA	1	NA	TRUE	NA	NA	NA	C	coding	1541	4626	310	4935	5.0	15	True	NA	NA
PB.4675.1	chr17	-	2661	12	full-splice_match	P2RX1	ENST00000225538.3	2697	12	33	3	9	-3	multi-exon	FALSE	canonical	1	73642	junction_7	30048.693923570067	NA	0	NA	TRUE	NA	NA	NA	A	coding	399	1200	243	1442	15.0	-3	True	AATAAA	-13
PB.5279.3	chr17	+	5416	17	full-splice_match	SEC14L1	ENST00000585618.5	2712	17	60	-2764	13	-8	multi-exon	FALSE	canonical	1	7807	junction_1	148164.24743231275	NA	9	NA	TRUE	NA	NA	NA	C	coding	715	2148	199	2346	45.0	-31	True	AATAAA	-13
PB.6453.5	chr2	+	4237	2	full-splice_match	SOCS5	ENST00000394861.2	4058	2	15	-194	15	194	multi-exon	FALSE	canonical	1	53951	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	279	1871	25.0	-125	False	NA	NA
PB.77.9	chr1	+	5119	25	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-1	-8	intron_retention	FALSE	non_canonical	0	0	junction_24	77892.2878483375	NA	0	NA	TRUE	NA	NA	NA	C	coding	1043	3132	210	3341	60.0	0	True	AGTAAA	-9
PB.1127.10	chr1	+	1831	5	novel_not_in_catalog	LYPLAL1	novel	1898	5	NA	NA	15	-5	any annotated donor/acceptor	FALSE	canonical	1	1472	junction_1	205219.83160549446	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	100	699	25.0	2	True	NA	NA
PB.1766.13	chr11	-	2238	20	incomplete-splice_match	CARS	ENST00000380525.8	2758	23	24	4469	3	-4461	3prime_fragment	FALSE	canonical	1	57720	junction_18	187232.62949683523	NA	1	NA	TRUE	NA	NA	NA	C	coding	730	2190	47	2236	70.0	4	True	NA	NA
PB.1766.12	chr11	-	2060	20	incomplete-splice_match	CARS	ENST00000278224.13	2491	22	-23	1654	0	-1653	3prime_fragment	FALSE	canonical	1	328066	junction_19	123507.33527982229	NA	0	NA	TRUE	NA	NA	NA	C	coding	662	1986	75	2060	45.0	197	False	NA	NA
PB.1766.11	chr11	-	2533	22	novel_in_catalog	CARS	novel	2758	23	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	11462	junction_10	196627.91259948068	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	104	1480	10.0	24	True	AATAAA	-16
PB.1766.10	chr11	-	2524	22	novel_in_catalog	CARS	novel	2758	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	43654	junction_20	162508.6052829552	NA	1	1	TRUE	NA	NA	NA	C	coding	738	2217	124	2340	10.0	4	True	AATAAA	-16
PB.1766.17	chr11	-	2244	1	novel_in_catalog	CARS	novel	2758	23	NA	NA	-4	-14655	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	100	303	56	358	75.0	-5	True	NA	NA
PB.1766.16	chr11	-	4195	1	novel_in_catalog	CARS	novel	2685	22	NA	NA	-3	-12726	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	100	303	78	380	85.0	194	False	NA	NA
PB.1766.15	chr11	-	2041	19	novel_in_catalog	CARS	novel	2758	23	NA	NA	0	-4461	combination_of_known_junctions	FALSE	canonical	1	43654	junction_17	164391.10325117625	NA	0	NA	TRUE	NA	NA	NA	C	coding	637	1911	129	2039	70.0	-1	True	NA	NA
PB.1766.14	chr11	-	2026	19	incomplete-splice_match	CARS	ENST00000278224.13	2491	22	-21	4451	-2	-4450	3prime_fragment	FALSE	canonical	1	328066	junction_18	125594.6574479672	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1953	73	2025	45.0	199	False	ATTAAA	-9
PB.3260.14	chr13	+	2166	5	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-19	0	intron_retention	FALSE	canonical	1	14828	junction_1	127191.57058621259	NA	3	NA	TRUE	NA	NA	NA	C	coding	126	381	321	701	30.0	-5	True	ATTAAA	-20
PB.3260.15	chr13	+	2348	10	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-18	-136	combination_of_known_junctions	FALSE	canonical	1	200086	junction_4	47613.7156570107	NA	3	NA	TRUE	NA	NA	NA	C	coding	298	897	123	1019	30.0	-4	True	ATTAAA	-18
PB.3260.16	chr13	+	2391	9	full-splice_match	NAXD	ENST00000470164.2	2377	9	-14	0	-14	0	multi-exon	FALSE	canonical	1	30220	junction_3	92831.33467174486	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	546	926	30.0	0	True	ATTAAA	-20
PB.3260.17	chr13	+	5222	7	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-11	1	intron_retention	FALSE	canonical	1	200086	junction_4	49633.49579557024	NA	1	NA	TRUE	NA	NA	NA	C	coding	135	408	116	523	25.0	3	True	ATTAAA	-21
PB.3260.10	chr13	+	3696	8	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	200086	junction_4	48452.25875150145	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	132	539	30.0	-13	True	ATTAAA	-19
PB.3260.11	chr13	+	2561	9	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	200086	junction_4	49172.70249446714	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	717	1097	30.0	-6	True	ATTAAA	-19
PB.3260.12	chr13	+	5920	6	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-19	0	intron_retention	FALSE	canonical	1	200086	junction_4	39413.38510201833	NA	3	NA	TRUE	NA	NA	NA	C	coding	135	408	124	531	30.0	-5	True	ATTAAA	-20
PB.3260.13	chr13	+	2622	10	novel_in_catalog	NAXD	novel	2311	7	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	1	11097	junction_9	95610.14399459226	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	124	1149	25.0	-5	True	ATTAAA	-21
PB.3586.1	chr14	-	4873	21	full-splice_match	POMT2	ENST00000261534.8	4876	21	1	2	1	0	multi-exon	TRUE	canonical	1	80066	junction_3	36056.89849682027	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	203	2455	15.0	-8	True	AATAAA	-15
PB.11244.4	chr8	+	3147	27	novel_in_catalog	INTS8	novel	735	6	NA	NA	-24	37	combination_of_known_junctions	FALSE	canonical	1	5187	junction_1	145247.64069053638	NA	0	NA	TRUE	NA	NA	NA	C	coding	886	2661	234	2894	25.0	-65	False	AATAAA	-19
PB.3586.2	chr14	-	2845	21	full-splice_match	POMT2	ENST00000261534.8	4876	21	2	2029	2	-2	multi-exon	FALSE	canonical	1	80066	junction_3	36056.89849682027	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	202	2454	20.0	-7	True	CATAAA	-25
PB.3260.18	chr13	+	3188	9	novel_not_in_catalog	NAXD	novel	2311	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	7984	junction_4	91374.40218409093	NA	2	NA	TRUE	NA	NA	NA	C	coding	126	381	1344	1724	30.0	7	True	ATTAAA	-19
PB.3260.19	chr13	+	2587	10	novel_in_catalog	NAXD	novel	2311	7	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	23835	junction_1	91755.78572103207	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	225	1121	25.0	21	True	ATTAAA	-21
PB.6453.4	chr2	+	4850	2	full-splice_match	SOCS5	ENST00000394861.2	4058	2	15	-807	15	-9	multi-exon	FALSE	canonical	1	53951	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	279	1871	45.0	-125	False	AATACA	-11
PB.7588.10	chr22	+	2160	5	novel_not_in_catalog	FRG1GP	novel	774	9	NA	NA	-163	73	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-24
PB.11119.11	chr8	+	1650	9	novel_not_in_catalog	AC110275.1	novel	623	6	NA	NA	38210	8446	intron_retention	FALSE	canonical	1	2985	junction_1	160939.90489382792	NA	1	NA	TRUE	NA	NA	NA	B	coding	228	687	466	1152	55.0	-6473	False	AATAAA	-16
PB.9433.1	chr5	-	6351	28	full-splice_match	RAPGEF6	ENST00000509018.5	8357	28	19	1987	-4	-21	multi-exon	FALSE	canonical	1	72799	junction_27	24811.48292739153	NA	0	NA	TRUE	NA	NA	NA	A	coding	1601	4806	188	4993	100.0	-1	True	AATAAA	-15
PB.2601.10	chr12	-	3165	18	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	-1	-6	no_combination_of_known_junctions	FALSE	canonical	1	2219	junction_17	150434.45510608846	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	169	2067	40.0	-11	True	AGTAAA	-11
PB.2601.11	chr12	-	3067	17	full-splice_match	RACGAP1	ENST00000312377.9	3073	17	-2	8	0	-6	multi-exon	FALSE	canonical	1	144339	junction_5	127932.05681092992	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	71	1969	40.0	-12	True	AGTAAA	-11
PB.2601.12	chr12	-	3103	17	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	1	627	junction_16	142381.138302489	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	107	2005	40.0	-101	False	AGTAAA	-11
PB.2601.13	chr12	-	3032	16	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	9	-6	no_combination_of_known_junctions	FALSE	canonical	1	1358	junction_10	147862.54597188867	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	117	1934	40.0	-58	False	AGTAAA	-11
PB.2601.14	chr12	-	2977	16	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	1	5755	junction_15	136109.83263666966	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	155	1879	40.0	-11	True	AGTAAA	-11
PB.2601.15	chr12	-	2951	16	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	7	-6	combination_of_known_junctions	FALSE	canonical	1	22487	junction_14	123402.2957932667	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	177	1853	40.0	-99	False	AGTAAA	-11
PB.2601.16	chr12	-	2903	16	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	1	22487	junction_14	126958.06954133409	NA	3	1	TRUE	NA	NA	NA	C	coding	558	1677	129	1805	40.0	19	True	AGTAAA	-11
PB.2601.17	chr12	-	2862	15	novel_in_catalog	RACGAP1	novel	387	3	NA	NA	7	-6	no_combination_of_known_junctions	FALSE	canonical	1	1432	junction_14	128455.8961047983	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	181	1764	40.0	-99	False	AGTAAA	-11
PB.8773.2	chr4	+	3965	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	57	290	-11	-288	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	124	1002	30.0	-33	True	AATAAA	-24
PB.8773.3	chr4	+	4241	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	69	2	1	0	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	112	990	35.0	-21	True	AATAAA	-23
PB.8773.1	chr4	+	2601	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	25	1686	-15	857	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	156	1034	25.0	-65	False	AATAAA	-30
PB.8773.6	chr4	+	4291	12	novel_not_in_catalog	DCUN1D4	novel	2293	9	NA	NA	7	-2	any annotated donor/acceptor	FALSE	canonical	1	3174	junction_9	113312.45269556342	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	104	778	40.0	-13	True	AATAAA	-21
PB.8773.7	chr4	+	4732	10	novel_in_catalog	DCUN1D4	novel	2293	9	NA	NA	9	0	intron_retention	FALSE	canonical	1	19051	junction_6	116404.58357379083	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	102	533	35.0	-11	True	AATAAA	-23
PB.8773.4	chr4	+	2746	11	full-splice_match	DCUN1D4	ENST00000334635.9	4312	11	69	1497	1	1046	multi-exon	FALSE	canonical	1	129440	junction_8	71284.98593841483	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	112	990	45.0	-21	True	AATAAA	-12
PB.8773.5	chr4	+	2447	10	full-splice_match	DCUN1D4	ENST00000381441.7	4207	10	69	1691	1	852	multi-exon	FALSE	canonical	1	55642	junction_8	90023.69940942232	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	112	885	20.0	-21	True	AATAAA	-25
PB.7076.12	chr2	+	5117	30	novel_not_in_catalog	GIGYF2	novel	766	5	NA	NA	-3	-777	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	103065.37105438413	NA	9	1	TRUE	NA	NA	NA	C	coding	1299	3900	247	4146	20.0	-4	True	GATAAA	-31
PB.1236.5	chr1	-	4899	12	novel_in_catalog	AKT3	novel	1688	14	NA	NA	11	-2	no_combination_of_known_junctions	FALSE	canonical	1	4669	junction_11	81761.99038794462	NA	7	NA	TRUE	NA	NA	NA	C	coding	437	1314	102	1415	10.0	-38	True	AATAAA	-18
PB.4669.1	chr17	-	1279	4	full-splice_match	TAX1BP3	ENST00000225525.3	1377	4	104	-6	101	0	multi-exon	FALSE	canonical	1	1193158	junction_3	144180.46223936015	NA	0	NA	TRUE	NA	NA	NA	A	coding	124	375	53	427	15.0	-1	True	AATAAA	-14
PB.3603.3	chr14	+	2048	13	novel_in_catalog	SPATA7	novel	2301	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	9669	junction_4	36429.52974427325	NA	0	NA	TRUE	NA	NA	NA	C	coding	535	1608	405	2012	20.0	-21	True	AATAAA	-23
PB.7043.43	chr2	-	1691	9	full-splice_match	SERPINE2	ENST00000409304.5	2161	9	90	380	90	190	multi-exon	FALSE	canonical	1	893005	junction_8	460077.7290179991	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	123	1316	50.0	397	False	AAGAAA	-18
PB.3603.2	chr14	+	2002	12	full-splice_match	SPATA7	ENST00000393545.8	2123	12	123	-2	4	0	multi-exon	FALSE	canonical	1	36512	junction_2	29541.687421659044	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	167	1966	20.0	-37	True	AATAAA	-23
PB.1011.18	chr1	-	2499	11	full-splice_match	UCHL5	ENST00000367454.5	1815	11	130	-814	-5	814	multi-exon	FALSE	canonical	1	400290	junction_9	121468.91051166136	NA	3	NA	TRUE	NA	NA	NA	C	coding	328	987	107	1093	20.0	-28	True	AATAGA	-17
PB.10133.2	chr6	-	2454	8	full-splice_match	ATG5	ENST00000369076.7	3216	8	3	759	3	707	multi-exon	FALSE	canonical	1	259123	junction_7	77931.1503396768	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	322	1149	30.0	-42	True	AATAAA	-38
PB.10133.3	chr6	-	1661	7	full-splice_match	ATG5	ENST00000369070.5	3088	7	-10	1437	-10	29	multi-exon	FALSE	canonical	1	87854	junction_5	131981.16075462775	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	441	1034	25.0	-55	True	AATAAA	-33
PB.10133.1	chr6	-	3088	8	full-splice_match	ATG5	ENST00000369076.7	3216	8	113	15	0	-15	multi-exon	FALSE	canonical	1	259123	junction_7	77931.1503396768	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	212	1039	60.0	68	False	TTTAAA	-15
PB.10133.4	chr6	-	1781	8	full-splice_match	ATG5	ENST00000369076.7	3216	8	-10	1445	-10	21	multi-exon	FALSE	canonical	1	259123	junction_7	77931.1503396768	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	335	1162	40.0	-55	True	AATAAA	-25
PB.10133.5	chr6	-	1680	8	full-splice_match	ATG5	ENST00000343245.7	3092	8	-33	1445	-33	21	multi-exon	FALSE	canonical	1	8824	junction_7	144070.51866204626	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	234	1061	40.0	296	False	AATAAA	-25
PB.11885.3	chr9	-	2340	9	full-splice_match	SLC2A6	ENST00000371897.8	2301	9	-39	0	2	0	multi-exon	FALSE	canonical	1	35236	junction_2	42045.57104183953	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	77	1414	35.0	0	True	AATAAA	-15
PB.4035.3	chr15	-	481	5	full-splice_match	RPS17	ENST00000647841.1	488	5	-2	9	0	0	multi-exon	FALSE	canonical	1	12719	junction_4	6801.839622484494	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	32	439	20.0	-7	True	AATAAA	-9
PB.2651.17	chr12	+	2811	21	incomplete-splice_match	NCKAP1L	ENST00000545638.2	3612	31	18110	-145	-1943	145	5prime_fragment	FALSE	canonical	1	332068	junction_16	69937.41559099464	NA	4	NA	TRUE	NA	NA	NA	C	coding	782	2349	40	2388	15.0	-2482	False	ATTAAA	-24
PB.11562.9	chr9	+	3005	5	novel_in_catalog	FRG1HP	novel	593	4	NA	NA	45	5135	combination_of_known_junctions	FALSE	canonical	1	320	junction_1	17165.218655758512	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-11
PB.2651.11	chr12	+	3849	31	full-splice_match	NCKAP1L	ENST00000293373.10	9016	31	43	5124	-4	151	multi-exon	FALSE	canonical	1	280074	junction_7	71712.78052627717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1127	3384	37	3420	15.0	2	True	ATTAAA	-30
PB.2651.10	chr12	+	3833	31	novel_not_in_catalog	NCKAP1L	novel	9016	31	NA	NA	-18	151	any annotated donor/acceptor	FALSE	canonical	1	8963	junction_14	102367.24793757142	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	51	3404	15.0	-1038	False	ATTAAA	-30
PB.413.6	chr1	+	5948	15	novel_not_in_catalog	ZYG11B	novel	2294	14	NA	NA	-13	-1690	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	45357.28979953701	NA	46	2	TRUE	NA	NA	NA	C	coding	744	2235	201	2435	95.0	1	True	NA	NA
PB.4035.2	chr15	-	2419	3	novel_in_catalog	AC245033.4	novel	312	4	NA	NA	-449	-3576	intron_retention	FALSE	canonical	1	12719	junction_2	8832.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	97	294	30	323	10.0	-5	True	AATAAA	-17
PB.6428.21	chr2	-	3654	5	novel_in_catalog	SRSF7	novel	2489	8	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2207138	junction_4	403149.15613292245	NA	1	NA	TRUE	NA	NA	NA	C	coding	132	399	106	504	20.0	-1	True	AATAAA	-13
PB.2651.19	chr12	+	2462	18	incomplete-splice_match	NCKAP1L	ENST00000545638.2	3612	31	19865	-136	-188	136	5prime_fragment	FALSE	canonical	1	332068	junction_13	65278.27957042634	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	39	2048	20.0	-727	False	ATTAAA	-15
PB.4035.1	chr15	-	3708	1	novel_in_catalog	RPS17	novel	488	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	106	321	30	350	10.0	-5	True	AATAAA	-18
PB.7073.2	chr2	-	4225	1	full-splice_match	TIGD1	ENST00000408957.5	2623	1	3	-1605	3	1605	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	591	1776	708	2483	75.0	28	False	NA	NA
PB.11406.3	chr8	-	3618	21	novel_in_catalog	RECQL4	novel	3896	20	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	19276	junction_7	107060.05490867031	NA	0	NA	TRUE	NA	NA	NA	C	coding	1142	3429	52	3480	5.0	-9	True	AATAAA	-16
PB.7763.1	chr22	-	1960	8	full-splice_match	ANKRD54	ENST00000215941.8	2184	8	223	1	-38	0	multi-exon	FALSE	canonical	1	124023	junction_7	71981.36981135026	NA	0	NA	TRUE	NA	NA	NA	A	coding	57	174	700	873	30.0	5109	False	NA	NA
PB.7943.8	chr3	-	3291	17	novel_not_in_catalog	RAF1	novel	3300	17	NA	NA	8	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	320311.4060078635	NA	17	2	TRUE	NA	NA	NA	C	coding	237	714	1668	2381	15.0	-1	True	AATAAA	-19
PB.9764.19	chr6	-	5827	20	incomplete-splice_match	NUP153	ENST00000262077.2	5487	22	-540	8410	-93	-8410	3prime_fragment	FALSE	canonical	1	223217	junction_4	102538.13520432316	NA	0	NA	TRUE	NA	NA	NA	C	coding	1456	4371	541	4911	25.0	-42	True	NA	NA
PB.9764.18	chr6	-	5178	22	full-splice_match	NUP153	ENST00000262077.2	5487	22	-544	853	-97	-853	multi-exon	FALSE	canonical	1	223217	junction_6	99842.31646266219	NA	0	NA	TRUE	NA	NA	NA	C	coding	1475	4428	545	4972	40.0	-46	True	AATAAA	-19
PB.9764.11	chr6	-	5642	21	novel_in_catalog	NUP153	novel	5811	21	NA	NA	-65	0	no_combination_of_known_junctions	TRUE	canonical	1	4009	junction_3	136128.7206608051	NA	0	NA	TRUE	NA	NA	NA	C	coding	1356	4071	513	4583	15.0	-14	True	AATAAA	-13
PB.9044.5	chr4	-	2799	1	novel_in_catalog	C4orf46	novel	3521	2	NA	NA	11	-158	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	136	411	81	491	55.0	0	True	NA	NA
PB.9764.13	chr6	-	6123	23	full-splice_match	NUP153	ENST00000537253.5	6030	23	-97	4	-97	-1	multi-exon	FALSE	canonical	1	3685	junction_11	154883.14154795028	NA	1	NA	TRUE	NA	NA	NA	C	coding	1506	4521	545	5065	15.0	-46	True	AATAAA	-12
PB.9764.15	chr6	-	5894	21	novel_not_in_catalog	NUP153	novel	5811	21	NA	NA	-52	-2	any annotated donor/acceptor	FALSE	canonical	1	5669	junction_19	160584.05325361542	NA	0	NA	TRUE	NA	NA	NA	C	coding	1445	4338	500	4837	15.0	-1	True	AATAAA	-11
PB.9044.1	chr4	-	3158	2	full-splice_match	C4orf46	ENST00000508836.1	1103	2	193	-2248	-16	2	multi-exon	FALSE	canonical	1	12749	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-7	True	NA	NA
PB.9764.17	chr6	-	5575	22	full-splice_match	NUP153	ENST00000262077.2	5487	22	-425	337	22	-337	multi-exon	FALSE	canonical	1	223217	junction_6	99842.31646266219	NA	3	NA	TRUE	NA	NA	NA	C	coding	1475	4428	426	4853	25.0	-32	True	CATAAA	-20
PB.9764.16	chr6	-	5296	21	novel_not_in_catalog	NUP153	novel	5811	21	NA	NA	17823	-2	any annotated donor/acceptor	FALSE	canonical	1	12382	junction_12	131298.37242056735	NA	0	NA	TRUE	NA	NA	NA	C	coding	1328	3987	253	4239	15.0	NA	False	AATAAA	-11
PB.12119.8	chrX	-	3534	8	novel_in_catalog	EDA2R	novel	3418	7	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	1	771	junction_2	20831.907178505706	NA	3	NA	TRUE	NA	NA	NA	C	coding	318	957	116	1072	30.0	166	False	AATAAA	-14
PB.12119.4	chrX	-	3132	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	38	1	any annotated donor/acceptor	FALSE	canonical	1	12617	junction_2	17229.364591366168	NA	2	NA	TRUE	NA	NA	NA	C	coding	231	696	71	766	25.0	5	True	AATAAA	-15
PB.12119.5	chrX	-	2975	6	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-39	1	any annotated donor/acceptor	FALSE	canonical	1	2985	junction_1	18455.122122597837	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	97	609	25.0	-3	True	AATAAA	-15
PB.12119.6	chrX	-	6254	6	novel_in_catalog	EDA2R	novel	3418	7	NA	NA	-69	0	intron_retention	FALSE	canonical	1	39310	junction_4	6126.576420807954	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	127	723	30.0	155	False	AATAAA	-14
PB.12119.7	chrX	-	6233	6	novel_in_catalog	EDA2R	novel	3418	7	NA	NA	3	0	intron_retention	FALSE	canonical	1	15469	junction_5	13364.300750881057	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	106	702	30.0	-30	True	AATAAA	-14
PB.12119.1	chrX	-	4717	8	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	3	1246	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	18823.624624391552	NA	1	NA	TRUE	NA	NA	NA	C	coding	297	894	111	1004	45.0	-30	True	NA	NA
PB.12119.2	chrX	-	4280	6	novel_in_catalog	EDA2R	novel	3418	7	NA	NA	-3	1246	no_combination_of_known_junctions	FALSE	canonical	1	1528	junction_1	19012.63396165823	NA	3	NA	TRUE	NA	NA	NA	C	coding	198	597	61	657	45.0	5	True	NA	NA
PB.12119.3	chrX	-	3180	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-61	1	any annotated donor/acceptor	FALSE	canonical	1	12617	junction_2	16692.075698932378	NA	1	1	TRUE	NA	NA	NA	C	coding	231	696	119	814	25.0	163	False	AATAAA	-15
PB.11864.12	chr9	-	6140	23	novel_not_in_catalog	RAPGEF1	novel	6085	24	NA	NA	32855	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	182241.20419387906	NA	0	NA	TRUE	NA	NA	NA	B	coding	1062	3189	232	3420	20.0	1714	False	AATAAA	-19
PB.11864.11	chr9	-	6224	24	novel_not_in_catalog	RAPGEF1	novel	6085	24	NA	NA	32885	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	176574.5789284675	NA	0	NA	TRUE	NA	NA	NA	B	coding	1100	3303	202	3504	20.0	-2	True	AATAAA	-19
PB.11864.17	chr9	-	4593	5	incomplete-splice_match	RAPGEF1	ENST00000372190.7	6045	24	79290	45709	-4483	3673	internal_fragment	FALSE	canonical	1	425215	junction_2	64938.598679829855	NA	2	NA	TRUE	NA	NA	NA	B	coding	316	951	255	1205	5.0	-1	True	AATAAA	-31
PB.9602.1	chr5	-	3498	16	full-splice_match	SLU7	ENST00000297151.8	3793	16	293	2	-20	-2	multi-exon	FALSE	canonical	1	315197	junction_15	101581.78462040656	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	96	1856	20.0	-3	True	CATAAA	-18
PB.9161.2	chr5	-	2683	2	full-splice_match	AC008825.1	ENST00000504398.1	452	2	-13	-2218	-13	2218	multi-exon	FALSE	canonical	1	961	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	22	True	NA	NA
PB.9602.2	chr5	-	1974	16	full-splice_match	SLU7	ENST00000297151.8	3793	16	313	1506	0	6	multi-exon	FALSE	canonical	1	315197	junction_15	101581.78462040656	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	76	1836	25.0	-1	True	AATAAA	-21
PB.10424.17	chr7	+	1661	6	full-splice_match	ABCB5	ENST00000406935.5	1483	6	59	-237	-20	237	multi-exon	FALSE	canonical	1	291	junction_5	5574.57566456856	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	488	868	30.0	0	True	ATTAAA	-18
PB.10424.16	chr7	+	3181	6	novel_not_in_catalog	ABCB5	novel	5811	28	NA	NA	-22	6207	any annotated donor/acceptor	FALSE	canonical	1	63	junction_5	5659.963794937208	NA	1	NA	TRUE	NA	NA	NA	C	coding	127	384	490	873	25.0	-2	True	NA	NA
PB.10424.15	chr7	+	4084	17	novel_in_catalog	ABCB5	novel	5811	28	NA	NA	-30	0	no_combination_of_known_junctions	FALSE	canonical	1	120	junction_1	2494.466168310116	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	261	2699	35.0	-195	False	AATAAA	-21
PB.10424.14	chr7	+	1926	7	novel_not_in_catalog	ABCB5	novel	5811	28	NA	NA	28	-203	any annotated donor/acceptor	FALSE	canonical	1	1722	junction_1	4603.915966025251	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	429	824	65.0	0	True	AATAAA	-42
PB.10424.13	chr7	+	3834	19	full-splice_match	ABCB5	ENST00000258738.10	2906	19	-72	-856	7	-529	multi-exon	FALSE	canonical	1	1325	junction_14	4795.898998166796	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	540	2978	65.0	-237	False	NA	NA
PB.10424.12	chr7	+	1623	7	novel_not_in_catalog	ABCB5	novel	5811	28	NA	NA	0	230	any annotated donor/acceptor	FALSE	canonical	1	291	junction_6	6094.061043343757	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	457	837	30.0	-244	False	ATTAAA	-11
PB.10424.11	chr7	+	1885	5	novel_in_catalog	ABCB5	novel	5811	28	NA	NA	0	-251	intron_retention	FALSE	canonical	1	62	junction_1	6163.165217645881	NA	6	1	TRUE	NA	NA	NA	C	coding	131	396	436	831	35.0	-244	False	AATAAA	-25
PB.10424.10	chr7	+	1925	7	novel_not_in_catalog	ABCB5	novel	5811	28	NA	NA	0	-3230	intron_retention	FALSE	non_canonical	0	0	junction_6	5190.427588894344	NA	2	NA	TRUE	NA	NA	NA	C	coding	131	396	560	955	80.0	0	True	NA	NA
PB.6930.2	chr2	-	2218	4	novel_in_catalog	FTCDNL1	novel	944	4	NA	NA	4	491	combination_of_known_junctions	FALSE	canonical	1	8600	junction_3	19300.478405124228	NA	2	NA	TRUE	NA	NA	NA	B	coding	147	444	119	562	20.0	-13	True	ACTAAA	-30
PB.2086.3	chr11	-	2602	13	novel_not_in_catalog	SLC29A2	novel	2262	12	NA	NA	-233	0	any annotated donor/acceptor	FALSE	canonical	1	942	junction_11	70638.09517887639	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	678	1688	25.0	-2	True	NA	NA
PB.2086.2	chr11	-	2716	11	novel_in_catalog	SLC29A2	novel	2262	12	NA	NA	-33	0	intron_retention	FALSE	canonical	1	97150	junction_10	40042.31024316654	NA	8	NA	TRUE	NA	NA	NA	C	coding	336	1011	792	1802	25.0	607	False	NA	NA
PB.2086.1	chr11	-	2511	12	full-splice_match	SLC29A2	ENST00000357440.6	2514	12	31	-28	31	27	multi-exon	TRUE	canonical	1	97150	junction_11	42141.76541015216	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	199	1569	15.0	-43	True	NA	NA
PB.4271.6	chr16	+	2568	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-9	1427	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	141693.0365756366	NA	5	1	TRUE	NA	NA	NA	C	coding	346	1041	101	1141	10.0	-9	True	AATAAA	-20
PB.4271.1	chr16	+	2965	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-15	1421	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	158567.48683466524	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	127	1086	20.0	-35	False	AATAAA	-14
PB.6575.1	chr2	+	1911	5	full-splice_match	DOK1	ENST00000233668.9	2555	5	637	7	-8	-4	multi-exon	FALSE	canonical	1	113650	junction_3	55334.02134480649	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	33	1478	30.0	-27	True	ATTAAA	-16
PB.4271.3	chr16	+	2924	11	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	0	1428	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	171757.57331544365	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	210	1250	10.0	-20	True	AATAAA	-21
PB.2086.4	chr11	-	2343	11	full-splice_match	SLC29A2	ENST00000619145.4	2380	11	36	1	36	0	multi-exon	FALSE	canonical	1	17902	junction_4	61712.61001092078	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	194	1279	25.0	-38	True	NA	NA
PB.5467.1	chr18	+	3399	6	novel_not_in_catalog	KATNAL2	novel	1348	7	NA	NA	110	2070	any annotated donor/acceptor	FALSE	canonical	1	19005	junction_2	2212.32357488682	NA	1	NA	TRUE	NA	NA	NA	B	coding	111	336	835	1170	10.0	0	True	NA	NA
PB.8779.3	chr4	+	2068	16	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	-74	-3	combination_of_known_junctions	TRUE	canonical	1	199597	junction_1	226991.9733657754	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	271	1902	30.0	-185	False	AATAAA	-24
PB.5467.2	chr18	+	3127	6	novel_in_catalog	KATNAL2	novel	1348	7	NA	NA	112	2071	combination_of_known_junctions	FALSE	canonical	1	14411	junction_2	3746.1797821247183	NA	1	NA	TRUE	NA	NA	NA	B	coding	111	336	562	897	10.0	2	True	NA	NA
PB.4271.9	chr16	+	2782	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-8	1416	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	141693.0365756366	NA	4	1	TRUE	NA	NA	NA	C	coding	346	1041	100	1140	35.0	-8	True	AATAAA	-9
PB.4271.8	chr16	+	3236	9	novel_in_catalog	NDE1	novel	3936	10	NA	NA	-8	1427	combination_of_known_junctions	FALSE	canonical	1	147370	junction_8	104261.33573793966	NA	4	NA	TRUE	NA	NA	NA	C	coding	346	1041	100	1140	10.0	-8	True	AATAAA	-20
PB.11632.1	chr9	-	1982	1	full-splice_match	GAS1	ENST00000298743.8	2827	1	844	1	844	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	182	549	56	604	25.0	1323	False	ATTAAA	-33
PB.6189.10	chr19	-	2633	4	novel_not_in_catalog	ZNF600	novel	2987	9	NA	NA	0	-951	any annotated donor/acceptor	FALSE	canonical	1	173	junction_2	33524.25564009173	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	328	2547	40.0	27	True	AATAAA	-14
PB.11891.4	chr9	+	1596	10	novel_not_in_catalog	RXRA	novel	5215	3	NA	NA	5469	-239	any annotated donor/acceptor	FALSE	canonical	1	23904	junction_1	173566.34826806467	NA	0	NA	TRUE	NA	NA	NA	B	coding	435	1308	123	1430	15.0	-2	True	NA	NA
PB.4243.8	chr16	+	4387	19	novel_in_catalog	CIITA	novel	850	7	NA	NA	4	63	combination_of_known_junctions	FALSE	canonical	1	24345	junction_6	40323.20887731506	NA	0	NA	TRUE	NA	NA	NA	C	coding	1081	3246	130	3375	20.0	0	True	TATAAA	-22
PB.4243.9	chr16	+	5592	19	novel_in_catalog	CIITA	novel	850	7	NA	NA	4	-107	intron_retention	FALSE	canonical	1	30634	junction_18	38801.784962601276	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	130	2934	30.0	0	True	NA	NA
PB.4243.6	chr16	+	4959	20	novel_in_catalog	CIITA	novel	850	7	NA	NA	-3	-108	combination_of_known_junctions	FALSE	canonical	1	11223	junction_6	48022.59877468932	NA	1	NA	TRUE	NA	NA	NA	C	coding	1007	3024	749	3772	30.0	-7	True	NA	NA
PB.4243.7	chr16	+	4756	20	novel_in_catalog	CIITA	novel	850	7	NA	NA	4	-107	no_combination_of_known_junctions	FALSE	canonical	1	11987	junction_11	48202.58367651481	NA	2	NA	TRUE	NA	NA	NA	C	coding	1010	3033	130	3162	30.0	0	True	NA	NA
PB.4243.4	chr16	+	4717	20	novel_in_catalog	CIITA	novel	850	7	NA	NA	-3	-107	combination_of_known_junctions	FALSE	canonical	1	30634	junction_19	39725.52654956117	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	137	3529	30.0	-7	True	NA	NA
PB.4243.5	chr16	+	5534	19	full-splice_match	CIITA	ENST00000570546.5	5342	19	-15	-177	-3	-2	multi-exon	FALSE	canonical	1	95821	junction_6	28353.183353619228	NA	1	NA	TRUE	NA	NA	NA	C	coding	933	2802	137	2938	20.0	-7	True	NA	NA
PB.4243.2	chr16	+	5280	19	novel_in_catalog	CIITA	novel	850	7	NA	NA	-11	57	intron_retention	FALSE	canonical	1	95391	junction_11	30401.915743730504	NA	2	NA	TRUE	NA	NA	NA	C	coding	1106	3321	145	3465	20.0	-15	True	TATAAA	-16
PB.4243.3	chr16	+	4783	20	novel_in_catalog	CIITA	novel	850	7	NA	NA	-6	59	combination_of_known_junctions	FALSE	canonical	1	11223	junction_6	40978.30555867133	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	752	3775	20.0	-10	True	TATAAA	-18
PB.4243.1	chr16	+	4556	20	full-splice_match	CIITA	ENST00000618327.4	4657	20	-18	119	-18	60	multi-exon	FALSE	canonical	1	95391	junction_11	29424.189576104323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1131	3396	152	3547	15.0	-1806	False	TATAAA	-19
PB.6320.17	chr2	+	2531	4	novel_not_in_catalog	TRIB2	novel	4391	3	NA	NA	200	-1463	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	144367.6415737112	NA	5	NA	TRUE	NA	NA	NA	C	coding	343	1032	1023	2054	55.0	3	True	TTTAAA	-39
PB.7598.1	chr22	-	9366	32	novel_in_catalog	MICAL3	novel	9445	32	NA	NA	-15	-7	combination_of_known_junctions	TRUE	canonical	1	14614	junction_31	57125.275790816966	NA	2	NA	TRUE	NA	NA	NA	B	coding	1973	5922	369	6290	35.0	-14	True	AATAAA	-9
PB.7598.2	chr22	-	4315	7	incomplete-splice_match	MICAL3	ENST00000441493.6	9445	32	206669	7	-401	-7	5prime_fragment	FALSE	canonical	1	106214	junction_5	60776.67026910902	NA	2	NA	TRUE	NA	NA	NA	B	coding	406	1221	19	1239	35.0	NA	False	AATAAA	-9
PB.8462.8	chr3	-	2151	4	novel_in_catalog	COMMD2	novel	3706	5	NA	NA	-2	643	intron_retention	FALSE	canonical	1	232661	junction_3	95329.00244358424	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	1003	1377	30.0	-9	True	AATAAA	-19
PB.11644.1	chr9	-	1970	2	full-splice_match	NFIL3	ENST00000297689.3	2085	2	113	2	113	-2	multi-exon	FALSE	canonical	1	81836	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	457	1374	298	1671	20.0	5839	False	AATAAA	-20
PB.4927.2	chr17	+	1754	3	full-splice_match	DUSP14	ENST00000613659.1	1559	3	-183	-12	-183	-2	multi-exon	FALSE	canonical	1	34461	junction_1	147591.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	528	1124	40.0	-287	False	AATAAA	-19
PB.4927.1	chr17	+	1469	3	full-splice_match	DUSP14	ENST00000617516.4	1537	3	60	8	60	6	multi-exon	FALSE	canonical	1	92205	junction_1	118719.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	198	597	249	845	40.0	0	True	AATAAA	-13
PB.677.2	chr1	-	3056	13	novel_in_catalog	PIAS3	novel	2386	4	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	1239	2132	20.0	2	True	AATAAA	-15
PB.6320.14	chr2	+	3011	2	incomplete-splice_match	TRIB2	ENST00000405331.3	830	3	-1107	2	196	-2	intron_retention	FALSE	canonical	1	319521	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	188	567	1178	1744	40.0	-1	True	AATAAA	-21
PB.8382.8	chr3	+	1596	5	incomplete-splice_match	RAB7A	ENST00000265062.7	2244	6	69237	411	0	32	5prime_fragment	FALSE	canonical	1	2362856	junction_1	445081.6887670032	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	10	633	50.0	-2660	False	GATAAA	-14
PB.677.3	chr1	-	2929	14	novel_in_catalog	PIAS3	novel	2386	4	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	146	2005	20.0	-25	True	AATAAA	-15
PB.4338.1	chr16	+	3034	10	full-splice_match	SH2B1	ENST00000359285.9	3033	10	-1	0	-1	0	multi-exon	FALSE	canonical	1	63122	junction_1	181873.6490157961	NA	2	NA	TRUE	NA	NA	NA	C	coding	683	2052	226	2277	20.0	-175	False	AATAAA	-22
PB.4338.3	chr16	+	2889	10	novel_in_catalog	SH2B1	novel	588	3	NA	NA	-29	-43	combination_of_known_junctions	FALSE	canonical	1	63122	junction_1	150356.90520923462	NA	1	NA	TRUE	NA	NA	NA	C	coding	671	2016	181	2196	60.0	1	True	NA	NA
PB.4338.2	chr16	+	2928	10	novel_not_in_catalog	SH2B1	novel	588	3	NA	NA	33	-1	any annotated donor/acceptor	FALSE	canonical	1	16770	junction_6	195799.7626051853	NA	13	1	TRUE	NA	NA	NA	C	coding	510	1533	191	1723	15.0	-9	True	AATAAA	-21
PB.4338.4	chr16	+	2888	10	novel_in_catalog	SH2B1	novel	588	3	NA	NA	-27	1	no_combination_of_known_junctions	FALSE	canonical	1	20043	junction_2	189060.71068414784	NA	3	NA	TRUE	NA	NA	NA	C	coding	284	855	1297	2151	15.0	3	True	AATAAA	-19
PB.9146.3	chr5	+	3657	26	novel_in_catalog	MARCH6	novel	3062	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	34039	junction_11	241276.8568915436	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	1852	3384	55.0	0	True	ATTAAA	-24
PB.9146.2	chr5	+	4269	25	full-splice_match	MARCH6	ENST00000511802.5	4734	25	179	286	-5	38	multi-exon	FALSE	canonical	1	374436	junction_1	186822.8939850697	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	2128	3954	15.0	2	True	ATTAAA	-16
PB.9146.1	chr5	+	4528	25	full-splice_match	MARCH6	ENST00000449913.6	3062	25	-48	-1418	-48	1094	multi-exon	TRUE	canonical	1	31781	junction_3	247191.00927492118	NA	0	NA	TRUE	NA	NA	NA	C	coding	862	2589	245	2833	80.0	-3718	False	NA	NA
PB.677.1	chr1	-	3136	13	novel_in_catalog	PIAS3	novel	2386	4	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	297	894	1319	2212	20.0	1	True	AATAAA	-15
PB.9146.7	chr5	+	3195	26	novel_in_catalog	MARCH6	novel	3062	25	NA	NA	0	-9	combination_of_known_junctions	TRUE	canonical	1	8073	junction_20	244750.89118682613	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	184	2931	45.0	0	True	ATTAAA	-15
PB.9146.6	chr5	+	3055	26	full-splice_match	MARCH6	ENST00000274140.9	9569	26	125	6389	-7	38	multi-exon	FALSE	canonical	1	374436	junction_1	189331.73630077342	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	8	2740	15.0	0	True	ATTAAA	-16
PB.9146.5	chr5	+	4435	26	full-splice_match	MARCH6	ENST00000274140.9	9569	26	125	5009	-7	1094	multi-exon	FALSE	canonical	1	374436	junction_1	189331.73630077342	NA	1	NA	TRUE	NA	NA	NA	C	coding	910	2733	8	2740	80.0	0	True	NA	NA
PB.9146.4	chr5	+	4102	26	full-splice_match	MARCH6	ENST00000274140.9	9569	26	-71	5538	-7	565	multi-exon	FALSE	canonical	1	374436	junction_1	189331.73630077342	NA	0	NA	TRUE	NA	NA	NA	C	coding	910	2733	204	2936	10.0	-20	True	AATAAA	-39
PB.9146.9	chr5	+	5683	24	novel_in_catalog	MARCH6	novel	3062	25	NA	NA	0	1094	intron_retention	FALSE	canonical	1	31781	junction_3	248242.9511948718	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1827	2162	3988	80.0	0	True	NA	NA
PB.9146.8	chr5	+	2909	25	full-splice_match	MARCH6	ENST00000449913.6	3062	25	191	-38	-5	38	multi-exon	FALSE	canonical	1	31781	junction_3	247191.00927492118	NA	1	NA	TRUE	NA	NA	NA	C	coding	862	2589	6	2594	15.0	2	True	ATTAAA	-16
PB.1841.1	chr11	-	1444	11	full-splice_match	SERGEF	ENST00000265965.9	1566	11	118	4	-8	0	multi-exon	FALSE	canonical	1	47499	junction_10	76241.13091376596	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	35	1411	40.0	-3	True	AATAAA	-16
PB.1841.2	chr11	-	1270	10	full-splice_match	SERGEF	ENST00000528200.5	1264	10	-9	3	-1	0	multi-exon	FALSE	canonical	1	47499	junction_9	85469.70875515699	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	28	894	40.0	4	True	AATAAA	-16
PB.9245.1	chr5	+	3920	15	novel_not_in_catalog	ZSWIM6	novel	5501	14	NA	NA	-13	-1100	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	42895.98990034631	NA	0	NA	TRUE	NA	NA	NA	A	coding	914	2745	423	3167	90.0	2	True	NA	NA
PB.9358.1	chr5	-	3917	10	full-splice_match	RIOK2	ENST00000283109.7	3922	10	13	-8	-5	8	multi-exon	FALSE	canonical	1	212805	junction_4	50429.986753914585	NA	2	NA	TRUE	NA	NA	NA	C	coding	552	1659	57	1715	20.0	-6	True	AATAAA	-25
PB.9358.2	chr5	-	2144	10	full-splice_match	RIOK2	ENST00000283109.7	3922	10	-17	1795	-17	274	multi-exon	FALSE	canonical	1	212805	junction_4	50429.986753914585	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	87	1745	20.0	-36	True	NA	NA
PB.9358.3	chr5	-	1835	10	full-splice_match	RIOK2	ENST00000283109.7	3922	10	19	2068	1	1	multi-exon	FALSE	canonical	1	212805	junction_4	50429.986753914585	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	51	1709	30.0	0	True	AATAAA	-20
PB.9358.4	chr5	-	1938	11	novel_not_in_catalog	RIOK2	novel	3922	10	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	3288	junction_6	118647.72739875806	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	716	1813	30.0	-5	True	AATAAA	-19
PB.1046.4	chr1	-	2848	8	novel_in_catalog	CHI3L1	novel	1920	2	NA	NA	45	0	intron_retention	FALSE	canonical	1	694028	junction_5	134752.47310925773	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	82	873	0.0	-2	True	AATAAA	-20
PB.4769.12	chr17	-	3016	23	novel_in_catalog	MYH10	novel	7762	43	NA	NA	-23	-6557	combination_of_known_junctions	FALSE	canonical	1	57674	junction_17	121326.01774234965	NA	2	NA	TRUE	NA	NA	NA	C	coding	951	2853	163	3015	75.0	558	False	AAGAAA	-16
PB.7684.1	chr22	+	2216	17	novel_in_catalog	EWSR1	novel	560	5	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	89384	junction_14	740066.632308453	NA	6	NA	TRUE	NA	NA	NA	C	coding	652	1959	82	2040	5.0	-4124	False	ATTAAA	-17
PB.2781.5	chr12	-	2278	6	full-splice_match	LIN7A	ENST00000552864.5	6112	6	186	3648	-35	1407	multi-exon	FALSE	canonical	1	90912	junction_4	9874.088749854338	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	57	719	55.0	0	True	AATACA	-25
PB.8914.2	chr4	-	1557	7	full-splice_match	INTS12	ENST00000451321.6	1975	7	415	3	-10	0	multi-exon	FALSE	canonical	1	57803	junction_6	82244.5299607957	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	66	1454	25.0	-29	True	AATAAA	-14
PB.5364.1	chr18	+	1704	14	incomplete-splice_match	NDC80	ENST00000261597.8	2172	17	21	10142	21	-8821	3prime_fragment	FALSE	canonical	1	201319	junction_7	43891.46286684594	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	162	1703	65.0	-31	True	NA	NA
PB.6984.35	chr2	-	4597	1	novel_in_catalog	IKZF2	novel	9350	8	NA	NA	-41679	-2511	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	NA	False	ATTAAA	-34
PB.12004.1	chrX	-	2129	3	novel_not_in_catalog	APOO	novel	1118	9	NA	NA	0	-20013	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	8359.5	NA	8	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-8	True	NA	NA
PB.2781.4	chr12	-	3159	6	full-splice_match	LIN7A	ENST00000552864.5	6112	6	189	2764	-32	2291	multi-exon	FALSE	canonical	1	90912	junction_4	9874.088749854338	NA	0	NA	TRUE	NA	NA	NA	C	coding	220	663	54	716	25.0	3	True	AGTAAA	-19
PB.6984.30	chr2	-	3037	9	novel_not_in_catalog	AC093865.1	novel	433	5	NA	NA	-129106	-424673	any annotated donor/acceptor	FALSE	canonical	1	9205	junction_8	35986.98231978301	NA	0	NA	TRUE	NA	NA	NA	B	coding	500	1503	205	1707	80.0	1828	False	AAGAAA	-44
PB.6320.12	chr2	+	2474	2	novel_in_catalog	TRIB2	novel	4391	3	NA	NA	116	-1462	no_combination_of_known_junctions	FALSE	canonical	1	6237	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	101	306	1691	1996	55.0	0	True	TTTAAA	-40
PB.6984.33	chr2	-	4267	1	novel_in_catalog	AC093865.1	novel	433	5	NA	NA	3613	-432309	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	4487	False	AATAAA	-19
PB.4812.2	chr17	-	4047	20	novel_not_in_catalog	TOP3A	novel	503	3	NA	NA	4	133	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	49584.731010961055	NA	2	1	TRUE	NA	NA	NA	C	coding	976	2931	301	3231	85.0	-41	True	NA	NA
PB.4812.3	chr17	-	4057	19	full-splice_match	TOP3A	ENST00000321105.9	4056	19	18	-19	-1	19	multi-exon	FALSE	canonical	1	120041	junction_18	29943.4374839968	NA	1	NA	TRUE	NA	NA	NA	C	coding	976	2931	273	3203	75.0	-13	True	NA	NA
PB.10687.2	chr7	-	3043	17	novel_in_catalog	SLC25A13	novel	3136	18	NA	NA	19	0	combination_of_known_junctions	TRUE	canonical	1	22614	junction_14	92707.54843053504	NA	0	NA	TRUE	NA	NA	NA	C	coding	567	1704	370	2073	10.0	4659	False	AATAAA	-15
PB.4812.1	chr17	-	5314	19	full-splice_match	TOP3A	ENST00000542570.5	4116	19	18	-1216	4	133	multi-exon	FALSE	canonical	1	120041	junction_18	29943.4374839968	NA	1	NA	TRUE	NA	NA	NA	C	coding	976	2931	287	3217	85.0	-27	True	NA	NA
PB.10687.4	chr7	-	2850	17	novel_in_catalog	SLC25A13	novel	3136	18	NA	NA	18	-194	combination_of_known_junctions	FALSE	canonical	1	22614	junction_14	92707.54843053504	NA	2	NA	TRUE	NA	NA	NA	C	coding	567	1704	371	2074	5.0	4658	False	AATAAA	-16
PB.10687.5	chr7	-	2743	16	novel_in_catalog	SLC25A13	novel	3136	18	NA	NA	-19	-201	no_combination_of_known_junctions	FALSE	canonical	1	6584	junction_10	114627.62364495256	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	799	1974	30.0	4664	False	AATAAA	-9
PB.4812.4	chr17	-	3791	19	full-splice_match	TOP3A	ENST00000321105.9	4056	19	13	252	-6	9	multi-exon	FALSE	canonical	1	120041	junction_18	29943.4374839968	NA	0	NA	TRUE	NA	NA	NA	C	coding	976	2931	278	3208	25.0	-18	True	AATAAA	-26
PB.10687.7	chr7	-	2616	18	full-splice_match	SLC25A13	ENST00000265631.9	3136	18	-5	525	-5	211	multi-exon	FALSE	canonical	1	155172	junction_16	69063.52237065682	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	143	2170	65.0	-31	True	AATAAA	-18
PB.10687.8	chr7	-	2495	17	novel_in_catalog	SLC25A13	novel	3136	18	NA	NA	9	204	no_combination_of_known_junctions	FALSE	canonical	1	2769	junction_15	92320.20421464834	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	305	2056	65.0	8	True	AATAAA	-11
PB.10687.9	chr7	-	2771	15	novel_not_in_catalog	SLC25A13	novel	3136	18	NA	NA	33	-11747	any annotated donor/acceptor	FALSE	canonical	1	4788	junction_1	75170.2999618336	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	105	1691	30.0	7	True	ATTAAA	-13
PB.10572.4	chr7	+	1995	16	full-splice_match	ASL	ENST00000395332.7	1622	16	11	-384	1	171	multi-exon	FALSE	canonical	1	364872	junction_5	103120.65833088709	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	198	1592	75.0	0	True	NA	NA
PB.4882.1	chr17	+	2358	1	novel_in_catalog	SUZ12P1	novel	929	6	NA	NA	-62	-24334	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	114	345	243	587	85.0	-3	True	NA	NA
PB.10572.2	chr7	+	1879	17	full-splice_match	ASL	ENST00000304874.13	2143	17	21	243	-15	171	multi-exon	FALSE	canonical	1	98899	junction_1	149199.6597323402	NA	2	NA	TRUE	NA	NA	NA	C	coding	464	1395	82	1476	75.0	0	True	NA	NA
PB.10572.1	chr7	+	1876	16	novel_in_catalog	ASL	novel	2143	17	NA	NA	6	1	intron_retention	FALSE	canonical	1	98899	junction_1	152784.3674490293	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	97	885	0.0	0	True	AATAAA	-17
PB.4882.2	chr17	+	3493	9	novel_not_in_catalog	SUZ12P1	novel	929	6	NA	NA	-38	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	130279.7369768223	NA	2	NA	TRUE	NA	NA	NA	B	coding	114	345	219	563	10.0	-21	False	AATATA	-15
PB.10514.5	chr7	-	2369	3	full-splice_match	POLR2J4	ENST00000326391.6	1422	3	23	-970	2	970	multi-exon	FALSE	canonical	1	102360	junction_2	47898.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	15	48	470	517	70.0	1	True	NA	NA
PB.11950.1	chrX	-	2347	1	incomplete-splice_match	PRKX	ENST00000262848.5	6031	9	106886	6	5533	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-14
PB.10015.1	chr6	+	891	6	incomplete-splice_match	HSP90AB1	ENST00000371646.9	2572	12	10	3452	10	-3449	3prime_fragment	FALSE	canonical	1	2184110	junction_4	2886367.121502433	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	792	100	891	70.0	-4	True	NA	NA
PB.8257.27	chr3	+	2635	10	novel_not_in_catalog	ST3GAL6	novel	804	5	NA	NA	-280	-4	any annotated donor/acceptor	FALSE	canonical	1	1488	junction_1	52703.038253366394	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	151	1146	35.0	-7073	False	AATAAA	-20
PB.7538.4	chr21	-	3702	11	full-splice_match	WDR4	ENST00000398208.2	2122	11	-13	-1567	0	1567	multi-exon	FALSE	canonical	1	136088	junction_4	33330.09899490249	NA	3	NA	TRUE	NA	NA	NA	C	coding	412	1239	74	1312	5.0	10	False	NA	NA
PB.11895.1	chr9	-	2747	10	novel_not_in_catalog	UBAC1	novel	1867	10	NA	NA	0	8279	intron_retention	FALSE	canonical	1	7363	junction_1	234526.03082055613	NA	17	1	TRUE	NA	NA	NA	C	coding	247	744	51	794	50.0	5	True	NA	NA
PB.10504.2	chr7	-	5095	15	novel_not_in_catalog	GLI3	novel	8208	15	NA	NA	310	0	any annotated donor/acceptor	FALSE	canonical	1	4453	junction_14	16703.82350095392	NA	0	NA	TRUE	NA	NA	NA	A	coding	1580	4743	105	4847	85.0	-234	False	NA	NA
PB.1046.8	chr1	-	1746	10	full-splice_match	CHI3L1	ENST00000255409.7	1792	10	46	0	46	0	multi-exon	FALSE	canonical	1	642296	junction_3	148583.18931681188	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	81	1232	0.0	-1	True	AATAAA	-20
PB.11617.7	chr9	-	2982	19	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	45	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	102251.80423897928	NA	3	1	TRUE	NA	NA	NA	B	coding	466	1401	1072	2472	20.0	1218	False	AGTAAA	-13
PB.9251.4	chr5	+	2042	14	full-splice_match	CWC27	ENST00000381070.7	2078	14	11	25	-5	-25	multi-exon	FALSE	canonical	1	289066	junction_9	45782.50778130838	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	207	1625	70.0	-8	True	NA	NA
PB.7538.2	chr21	-	3339	12	novel_not_in_catalog	WDR4	novel	1471	12	NA	NA	1	-3	any annotated donor/acceptor	FALSE	canonical	1	1094	junction_1	62748.09431369211	NA	3	NA	TRUE	NA	NA	NA	C	coding	412	1239	51	1289	35.0	-12	True	NA	NA
PB.10239.1	chr6	+	1633	1	antisense	novelGene_NHSL1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.1046.9	chr1	-	3865	8	novel_not_in_catalog	CHI3L1	novel	1920	2	NA	NA	46	-1	intron_retention	FALSE	canonical	1	23074	junction_2	326055.82275639084	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	81	875	0.0	-1	True	AATAAA	-19
PB.9251.1	chr5	+	2114	11	full-splice_match	CWC27	ENST00000508024.1	2103	11	-14	3	2	-3	multi-exon	FALSE	canonical	1	8639	junction_10	102386.78823368766	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	216	1361	25.0	-17	True	AATAAA	-13
PB.9251.2	chr5	+	1601	14	full-splice_match	CWC27	ENST00000381070.7	2078	14	15	462	-1	-290	multi-exon	FALSE	canonical	1	289066	junction_9	45782.50778130838	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1398	203	1600	75.0	-4	True	AATAAA	-35
PB.7538.3	chr21	-	1498	12	full-splice_match	WDR4	ENST00000330317.6	1471	12	-32	5	5	-5	multi-exon	FALSE	canonical	1	111028	junction_1	38938.88627066778	NA	0	NA	TRUE	NA	NA	NA	C	coding	412	1239	69	1307	35.0	15	False	NA	NA
PB.8356.1	chr3	+	2987	15	novel_in_catalog	KALRN	novel	10806	60	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	31792	junction_1	18311.15829938964	NA	3	1	TRUE	NA	NA	NA	A	coding	668	2007	174	2180	40.0	-9	True	AATAAA	-26
PB.729.5	chr1	-	3043	4	novel_in_catalog	GOLPH3L	novel	2999	5	NA	NA	-45	-6	no_combination_of_known_junctions	FALSE	canonical	1	4363	junction_1	127318.16583225227	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	211	564	10.0	-6	True	AATAAA	-16
PB.4259.3	chr16	+	6749	11	full-splice_match	ERCC4	ENST00000311895.7	6758	11	12	-3	12	3	multi-exon	FALSE	canonical	1	44663	junction_8	18668.296049988065	NA	5	NA	TRUE	NA	NA	NA	C	coding	905	2718	31	2748	15.0	-22	True	AATAAA	-28
PB.4259.2	chr16	+	2843	11	full-splice_match	ERCC4	ENST00000311895.7	6758	11	11	3904	11	16	multi-exon	FALSE	canonical	1	44663	junction_8	18668.296049988065	NA	1	NA	TRUE	NA	NA	NA	C	coding	905	2718	32	2749	20.0	-23	True	NA	NA
PB.4259.1	chr16	+	2460	3	full-splice_match	ERCC4	ENST00000576348.1	604	3	-32	-1824	2	1824	multi-exon	FALSE	canonical	1	57477	junction_1	11021.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	195	588	8	595	25.0	-32	True	AATAAA	-15
PB.729.2	chr1	-	3254	6	full-splice_match	GOLPH3L	ENST00000427665.1	973	6	-74	-2207	-74	-5	multi-exon	FALSE	canonical	1	2775	junction_3	160114.34981087735	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	240	1163	15.0	-35	False	AATAAA	-17
PB.923.2	chr1	-	2567	9	novel_not_in_catalog	SELL	novel	2436	9	NA	NA	-501	-2	any annotated donor/acceptor	FALSE	canonical	1	2305	junction_8	452488.60585150373	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	406	1452	20.0	-580	False	AATAAA	-19
PB.1770.21	chr11	-	3292	20	full-splice_match	NUP98	ENST00000397004.8	3923	20	-27	658	-7	-376	multi-exon	FALSE	canonical	1	154074	junction_19	105312.62002016883	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	198	2960	20.0	196	False	AGTAAA	-23
PB.1770.20	chr11	-	3704	20	full-splice_match	NUP98	ENST00000397007.8	3698	20	-7	1	-2	-1	multi-exon	FALSE	canonical	1	85348	junction_10	128579.26575868114	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2814	184	2997	25.0	-1	True	ATTAAA	-17
PB.1770.22	chr11	-	2304	2	novel_not_in_catalog	NUP98	novel	6973	33	NA	NA	6	-13640	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	18	True	NA	NA
PB.5592.3	chr19	-	2981	14	novel_in_catalog	TIMM13	novel	1973	3	NA	NA	-29069	-1	no_combination_of_known_junctions	FALSE	canonical	1	13713	junction_3	676353.0360372668	NA	0	NA	TRUE	NA	NA	NA	A	coding	587	1764	91	1854	30.0	-5	True	AATAAA	-15
PB.5280.3	chr17	+	3674	11	full-splice_match	SEPT9	ENST00000329047.12	4453	11	781	-2	-17	0	multi-exon	FALSE	canonical	1	197504	junction_1	1130546.6008723213	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	32	1738	30.0	0	True	AATAAA	-23
PB.5592.6	chr19	-	4376	13	novel_not_in_catalog	LMNB2	novel	769	5	NA	NA	55	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242307.16793065862	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	69	1871	15.0	17	True	AATAAA	-13
PB.5592.7	chr19	-	4187	14	novel_not_in_catalog	LMNB2	novel	769	5	NA	NA	30	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	295993.28621366085	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	94	1896	15.0	-8	True	AATAAA	-13
PB.6320.11	chr2	+	2863	3	full-splice_match	TRIB2	ENST00000155926.8	4391	3	351	1177	305	-1177	multi-exon	FALSE	canonical	1	290981	junction_2	14270.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	1069	2100	70.0	6	True	TTTAAA	-6
PB.10697.5	chr7	-	2416	5	novel_in_catalog	PDAP1	novel	302	3	NA	NA	-12	536	intron_retention	FALSE	canonical	1	259182	junction_1	352259.4497249151	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	55	609	20.0	-9	True	ATTAAA	-15
PB.10697.4	chr7	-	2652	5	novel_in_catalog	PDAP1	novel	302	3	NA	NA	-13	536	intron_retention	FALSE	canonical	1	259182	junction_2	349379.8732249577	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-10	True	ATTAAA	-15
PB.10697.3	chr7	-	1290	6	full-splice_match	PDAP1	ENST00000350498.7	2546	6	233	1023	-6	537	multi-exon	FALSE	canonical	1	259182	junction_2	318230.44174849143	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	49	594	20.0	-3	True	ATTAAA	-16
PB.10697.2	chr7	-	2417	6	full-splice_match	PDAP1	ENST00000350498.7	2546	6	236	-107	-3	107	multi-exon	FALSE	canonical	1	259182	junction_2	318230.44174849143	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	46	591	65.0	0	True	NA	NA
PB.10697.1	chr7	-	2598	6	full-splice_match	PDAP1	ENST00000350498.7	2546	6	233	-285	-6	285	multi-exon	FALSE	canonical	1	259182	junction_2	318230.44174849143	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	49	594	35.0	-3	True	AATAAA	-15
PB.10134.20	chr6	+	2216	3	incomplete-splice_match	CRYBG1	ENST00000369066.7	7553	20	49573	9	16844	-9	5prime_fragment	FALSE	canonical	1	327118	junction_2	24602.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	11	331	30.0	140	False	AATAAA	-21
PB.10134.21	chr6	+	2369	4	novel_not_in_catalog	CRYBG1	novel	9909	22	NA	NA	16281	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	167015.07526035554	NA	5	NA	TRUE	NA	NA	NA	C	coding	123	372	110	481	35.0	-423	False	AATAAA	-24
PB.7996.4	chr3	+	3753	7	novel_in_catalog	GPD1L	novel	594	4	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	2318	junction_1	76820.35710886362	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	132	956	20.0	11	True	AATAAA	-15
PB.7996.5	chr3	+	3478	5	novel_not_in_catalog	GPD1L	novel	4060	8	NA	NA	-12228	0	any annotated donor/acceptor	FALSE	canonical	1	72	junction_1	92961.4162418339	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	136	675	10.0	NA	False	AATAAA	-21
PB.7996.2	chr3	+	3811	7	novel_in_catalog	GPD1L	novel	594	4	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	1	5597	junction_2	77767.36227024948	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	93	1007	10.0	-3	True	AATAAA	-22
PB.7996.3	chr3	+	3232	9	novel_not_in_catalog	GPD1L	novel	594	4	NA	NA	8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	69544.49099632191	NA	1	1	TRUE	NA	NA	NA	C	coding	351	1056	93	1148	10.0	-3	True	AATAAA	-19
PB.7996.1	chr3	+	3902	8	full-splice_match	GPD1L	ENST00000282541.9	4060	8	150	8	28	-1	multi-exon	FALSE	canonical	1	117337	junction_1	35922.86157412115	NA	17	NA	TRUE	NA	NA	NA	C	coding	351	1056	52	1107	25.0	38	True	AATAAA	-13
PB.8413.3	chr3	+	1072	7	incomplete-splice_match	CEP63	ENST00000332047.9	2056	12	11	15990	11	1	3prime_fragment	FALSE	canonical	1	56658	junction_1	88988.69680408231	NA	1	NA	TRUE	NA	NA	NA	C	coding	249	747	325	1071	65.0	14	True	NA	NA
PB.1344.10	chr10	+	2796	1	novel_in_catalog	RAB18	novel	4811	5	NA	NA	13502	6699	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-8055	False	NA	NA
PB.227.4	chr1	+	2822	9	novel_in_catalog	RCC1	novel	2715	12	NA	NA	-29	0	intron_retention	FALSE	canonical	1	302034	junction_1	242019.2123494215	NA	12	1	TRUE	NA	NA	NA	C	coding	316	951	16	966	30.0	-27	True	AATAAA	-14
PB.8413.1	chr3	+	2253	13	novel_in_catalog	CEP63	novel	2943	16	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	56658	junction_1	96926.41915516666	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	397	2022	30.0	-764	False	AATAAA	-13
PB.4903.5	chr17	+	3212	20	novel_in_catalog	LIG3	novel	8400	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	5831	junction_1	66700.68261060168	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	146	2914	10.0	1	True	AATAAA	-14
PB.4903.4	chr17	+	8224	20	full-splice_match	LIG3	ENST00000378526.8	8400	20	18	158	0	-158	multi-exon	FALSE	canonical	1	141566	junction_1	46680.09897280428	NA	1	NA	TRUE	NA	NA	NA	C	coding	1009	3030	116	3145	75.0	0	True	AATAAA	-8
PB.4903.6	chr17	+	4072	20	full-splice_match	LIG3	ENST00000262327.9	3055	20	-16	-1001	-16	-199	multi-exon	FALSE	canonical	1	14297	junction_19	68113.10109360209	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	98	2947	20.0	18	True	AGTAAA	-19
PB.4903.1	chr17	+	7896	20	full-splice_match	LIG3	ENST00000378526.8	8400	20	5	499	5	-499	multi-exon	FALSE	canonical	1	141566	junction_1	46680.09897280428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	129	3158	40.0	-13	True	AATAAA	-22
PB.4903.3	chr17	+	3597	20	full-splice_match	LIG3	ENST00000378526.8	8400	20	26	4777	8	162	multi-exon	FALSE	canonical	1	141566	junction_1	46680.09897280428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	108	3137	20.0	8	True	TTTAAA	-24
PB.4903.2	chr17	+	3425	20	full-splice_match	LIG3	ENST00000378526.8	8400	20	36	4939	-16	0	multi-exon	FALSE	canonical	1	141566	junction_1	46680.09897280428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3030	98	3127	10.0	18	True	AATAAA	-14
PB.10882.7	chr7	-	3671	13	novel_not_in_catalog	PARP12	novel	3796	12	NA	NA	22	-3	any annotated donor/acceptor	FALSE	canonical	1	4830	junction_6	94074.31557827479	NA	1	NA	TRUE	NA	NA	NA	C	coding	231	696	2168	2863	40.0	-1	True	AATAAA	-14
PB.10882.6	chr7	-	3746	13	novel_not_in_catalog	PARP12	novel	3796	12	NA	NA	-19	-3	any annotated donor/acceptor	FALSE	canonical	1	3849	junction_4	90291.3079153002	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	2474	2938	40.0	-42	True	AATAAA	-14
PB.10882.5	chr7	-	2876	11	novel_in_catalog	PARP12	novel	3796	12	NA	NA	1	-2	no_combination_of_known_junctions	FALSE	canonical	1	2925	junction_7	77457.63457529542	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	1006	2067	40.0	-22	True	AATAAA	-15
PB.10882.4	chr7	-	3807	13	novel_not_in_catalog	PARP12	novel	3796	12	NA	NA	-15	-2	any annotated donor/acceptor	FALSE	canonical	1	359	junction_4	92391.54639310743	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	2534	2998	40.0	-38	True	AATAAA	-15
PB.10882.2	chr7	-	3481	12	novel_in_catalog	PARP12	novel	3796	12	NA	NA	139	-3	combination_of_known_junctions	FALSE	canonical	1	36968	junction_10	66850.16984308706	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	1210	2673	40.0	116	False	AATAAA	-14
PB.10882.1	chr7	-	2955	12	full-splice_match	PARP12	ENST00000263549.7	3796	12	834	7	46	-2	multi-exon	FALSE	canonical	1	120454	junction_11	46147.71945996218	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	41	2146	40.0	23	True	AATAAA	-15
PB.8563.14	chr3	+	4823	27	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	12508	junction_1	652788.6497960603	NA	1	NA	TRUE	NA	NA	NA	C	coding	1403	4212	169	4380	15.0	-48	True	ATTAAA	-14
PB.3174.2	chr13	+	1301	11	full-splice_match	RNASEH2B	ENST00000336617.7	1629	11	85	243	-5	19	multi-exon	FALSE	canonical	1	356922	junction_1	148659.05317218322	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	315	1253	10.0	-28	True	AATAAA	-34
PB.2165.2	chr11	+	2645	5	novel_not_in_catalog	SPCS2	novel	2708	5	NA	NA	1	-44	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	78787.14430191007	NA	0	NA	TRUE	NA	NA	NA	B	coding	226	681	21	701	20.0	19	True	NA	NA
PB.2165.1	chr11	+	1295	5	novel_not_in_catalog	SPCS2	novel	2708	5	NA	NA	0	18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	78787.14430191007	NA	0	NA	TRUE	NA	NA	NA	B	coding	226	681	23	703	20.0	17	True	ATTAAA	-24
PB.3174.1	chr13	+	1580	10	full-splice_match	RNASEH2B	ENST00000422660.6	4885	10	16	3289	-5	0	multi-exon	FALSE	canonical	1	113744	junction_9	217534.15879254512	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	315	1088	30.0	-28	True	ATTAAA	-16
PB.2479.1	chr12	+	1810	12	novel_not_in_catalog	APOLD1	novel	574	4	NA	NA	27726	-1	any annotated donor/acceptor	FALSE	canonical	1	891	junction_11	254126.09473684191	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	36	1265	40.0	-6930	False	AATAAA	-16
PB.10290.1	chr6	-	2999	7	full-splice_match	MTRF1L	ENST00000367233.9	3676	7	-34	711	-34	-711	multi-exon	FALSE	canonical	1	5133	junction_5	7720.899488833323	NA	4	NA	TRUE	NA	NA	NA	C	coding	380	1143	35	1177	15.0	-31	True	NA	NA
PB.2479.3	chr12	+	2361	11	full-splice_match	DDX47	ENST00000545038.5	2357	11	-8	4	0	-4	multi-exon	FALSE	canonical	1	611390	junction_4	126194.72909836608	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	23	790	45.0	-15	True	AATAAA	-17
PB.2479.2	chr12	+	2888	10	novel_in_catalog	APOLD1	novel	574	4	NA	NA	27735	0	intron_retention	FALSE	canonical	1	611390	junction_4	118790.34778482428	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	27	794	45.0	-19	True	AATAAA	-17
PB.10290.4	chr6	-	2527	7	full-splice_match	MTRF1L	ENST00000367233.9	3676	7	-24	1173	-24	-1173	multi-exon	FALSE	canonical	1	5133	junction_5	7720.899488833323	NA	4	NA	TRUE	NA	NA	NA	C	coding	380	1143	25	1167	95.0	-21	True	NA	NA
PB.2479.4	chr12	+	1802	12	full-splice_match	DDX47	ENST00000358007.7	1817	12	9	6	0	-4	multi-exon	FALSE	canonical	1	577627	junction_7	135768.44371159215	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	14	1381	45.0	-6	True	AATAAA	-17
PB.10290.6	chr6	-	2486	7	full-splice_match	MTRF1L	ENST00000464135.5	3651	7	-8	1173	-8	-1173	multi-exon	FALSE	canonical	1	1972	junction_5	8503.132651493148	NA	7	NA	TRUE	NA	NA	NA	C	coding	238	717	410	1126	95.0	-5	True	NA	NA
PB.10290.7	chr6	-	2414	6	full-splice_match	MTRF1L	ENST00000367231.9	3539	6	-48	1173	-48	-1173	multi-exon	FALSE	canonical	1	5133	junction_4	13105.424092336729	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	49	864	95.0	-45	True	NA	NA
PB.10290.8	chr6	-	2362	6	full-splice_match	MTRF1L	ENST00000485512.5	3514	6	-21	1173	-21	-1173	multi-exon	FALSE	canonical	1	1972	junction_4	14021.146281242487	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	22	384	95.0	-18	True	NA	NA
PB.10290.9	chr6	-	2388	7	novel_in_catalog	MTRF1L	novel	3214	4	NA	NA	-7	-1187	combination_of_known_junctions	FALSE	canonical	1	582	junction_4	9076.057907422633	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	8	1042	65.0	-4	True	NA	NA
PB.8324.1	chr3	+	3203	1	antisense	novelGene_GSK3B_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	NA	False	NA	NA
PB.9134.13	chr5	-	3225	18	full-splice_match	NSUN2	ENST00000506139.5	2619	18	-285	-321	-36	-7	multi-exon	FALSE	canonical	1	55346	junction_16	198647.7291681281	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	349	2547	45.0	-37	True	AATAAA	-6
PB.2187.1	chr11	-	1671	2	full-splice_match	KCTD14	ENST00000353172.5	1691	2	19	1	19	-1	multi-exon	FALSE	canonical	1	39969	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	255	768	27	794	10.0	-3	True	NA	NA
PB.2053.20	chr11	+	2430	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	7782	12531	5029	6496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-9814	False	NA	NA
PB.2053.21	chr11	+	2018	1	full-splice_match	NEAT1	ENST00000501122.2	22743	1	8194	12531	5441	6496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-9402	False	NA	NA
PB.12084.1	chrX	+	2829	1	full-splice_match	GSPT2	ENST00000340438.5	2802	1	-31	4	-31	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	628	1887	228	2114	40.0	-62	False	AATAAA	-32
PB.7945.1	chr3	-	3113	1	novel_in_catalog	IQSEC1	novel	5279	14	NA	NA	67127	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	114	345	1747	2091	10.0	2308	False	AATAAA	-14
PB.2006.3	chr11	-	4224	21	novel_not_in_catalog	NXF1	novel	4128	20	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_11	287120.98262403253	NA	12	2	TRUE	NA	NA	NA	C	coding	356	1071	85	1155	5.0	-2	True	TATAAA	-19
PB.4664.16	chr17	+	1984	12	novel_not_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-95	-4	any annotated donor/acceptor	FALSE	canonical	1	956	junction_6	341389.266207801	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	547	1170	35.0	-3	True	AATAAA	-16
PB.4664.15	chr17	+	4178	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	203	1116	-8	-1	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	249	1481	30.0	-11	True	AATAAA	-17
PB.4664.14	chr17	+	3348	9	incomplete-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-101	7215	-101	-3344	3prime_fragment	FALSE	canonical	1	115237	junction_2	243188.99742326824	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	553	1626	95.0	-9	True	NA	NA
PB.4664.13	chr17	+	3043	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-110	2564	-110	703	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	562	1794	30.0	-18	True	AATAAA	-27
PB.4664.12	chr17	+	5300	11	full-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	197	0	-14	0	multi-exon	FALSE	canonical	1	115237	junction_2	296185.0308952834	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	255	1487	10.0	-17	True	ATTAAA	-15
PB.4664.11	chr17	+	1616	12	novel_not_in_catalog	PAFAH1B1	novel	557	5	NA	NA	-114	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	330516.2461357276	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	279	1511	35.0	-22	True	AATAAA	-17
PB.4664.10	chr17	+	1954	7	incomplete-splice_match	PAFAH1B1	ENST00000397195.9	5497	11	-114	12140	-114	3101	3prime_fragment	FALSE	canonical	1	115237	junction_2	274755.0813328522	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	566	1240	65.0	-22	True	NA	NA
PB.5787.1	chr19	+	1143	13	full-splice_match	TECR	ENST00000215567.9	1171	13	35	-7	0	5	multi-exon	FALSE	canonical	1	1540	junction_12	1013749.3551609506	NA	0	NA	TRUE	NA	NA	NA	A	coding	308	927	103	1029	0.0	-3	True	AATAAA	-26
PB.11346.11	chr8	+	1935	13	novel_in_catalog	PHF20L1	novel	3375	21	NA	NA	-5	-10	combination_of_known_junctions	FALSE	canonical	1	68585	junction_1	65730.26648799876	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1617	317	1933	75.0	-21	True	NA	NA
PB.11346.10	chr8	+	1958	13	novel_in_catalog	PHF20L1	novel	3375	21	NA	NA	-5	6	combination_of_known_junctions	FALSE	canonical	1	29156	junction_5	107262.01698498635	NA	2	2	TRUE	NA	NA	NA	C	coding	547	1641	317	1957	45.0	-21	True	AAAAAG	-37
PB.8030.2	chr3	+	3097	5	novel_in_catalog	SLC25A38	novel	2147	7	NA	NA	6	-61	intron_retention	FALSE	canonical	1	60329	junction_2	114573.84188919389	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	1933	2475	20.0	-5574	False	AATAAA	-37
PB.8030.3	chr3	+	2112	7	full-splice_match	SLC25A38	ENST00000650617.1	2101	7	-22	11	-22	-11	multi-exon	FALSE	canonical	1	60329	junction_2	99755.98480236105	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	378	1292	30.0	-22	True	AATAAA	-40
PB.8030.1	chr3	+	1692	7	full-splice_match	SLC25A38	ENST00000650617.1	2101	7	284	125	-7	23	multi-exon	FALSE	canonical	1	60329	junction_2	99755.98480236105	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	72	986	35.0	15	True	NA	NA
PB.5674.5	chr19	+	2132	11	novel_in_catalog	CERS4	novel	531	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	69570	junction_1	142539.5630989516	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	1131	1823	30.0	1	True	ATTAAA	-13
PB.1199.17	chr1	-	5845	1	novel_in_catalog	EGLN1	novel	7097	5	NA	NA	-1955	-50314	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	339	1020	411	1430	80.0	-12	True	NA	NA
PB.4087.4	chr15	-	2352	21	novel_in_catalog	AC068831.7	novel	6683	35	NA	NA	-24	-24075	no_combination_of_known_junctions	FALSE	canonical	1	6174	junction_20	58336.02244548388	NA	1	NA	TRUE	NA	NA	NA	B	coding	526	1581	472	2052	20.0	-15	True	AATAAA	-19
PB.4087.5	chr15	-	2425	22	full-splice_match	VPS33B	ENST00000535906.1	2420	22	-6	1	1	-1	multi-exon	FALSE	canonical	1	750	junction_21	58428.77853419265	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	354	2126	15.0	-27	True	AATAAA	-18
PB.5855.1	chr19	+	3114	8	full-splice_match	SLC25A42	ENST00000318596.7	3120	8	7	-1	7	1	multi-exon	FALSE	canonical	1	43781	junction_1	26736.707526300594	NA	1	NA	TRUE	NA	NA	NA	A	coding	318	957	145	1101	0.0	12	True	AATAAA	-18
PB.9148.1	chr5	-	2340	4	full-splice_match	DAP	ENST00000230895.10	2339	4	-26	25	-26	-25	multi-exon	FALSE	canonical	1	547863	junction_3	251896.12840260612	NA	0	NA	TRUE	NA	NA	NA	C	coding	102	309	231	539	30.0	-77	True	ATTAAA	-9
PB.4087.1	chr15	-	2768	23	full-splice_match	VPS33B	ENST00000333371.7	2767	23	-8	7	-8	-7	multi-exon	FALSE	canonical	1	112094	junction_22	43900.18867031504	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	363	2216	30.0	-36	False	NA	NA
PB.4087.2	chr15	-	2416	23	full-splice_match	VPS33B	ENST00000333371.7	2767	23	92	259	2	0	multi-exon	FALSE	canonical	1	112094	junction_22	43900.18867031504	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	263	2116	20.0	64	False	AATAAA	-19
PB.4087.3	chr15	-	2532	23	novel_not_in_catalog	AC068831.7	novel	6683	35	NA	NA	-46	-24075	any annotated donor/acceptor	FALSE	canonical	1	2297	junction_14	58794.89924065699	NA	1	NA	TRUE	NA	NA	NA	B	coding	622	1869	364	2232	20.0	-37	False	AATAAA	-19
PB.592.3	chr1	-	863	9	novel_not_in_catalog	PSMA5	novel	3729	9	NA	NA	-17	-22	any annotated donor/acceptor	FALSE	canonical	1	17668	junction_8	955270.0774172127	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	171	722	70.0	-8	True	CATAAA	-11
PB.11229.6	chr8	-	3155	5	novel_in_catalog	C8orf88	novel	894	6	NA	NA	-15	535	intron_retention	FALSE	canonical	1	94794	junction_4	25753.45190455058	NA	1	1	TRUE	NA	NA	NA	C	coding	128	387	186	572	85.0	-56	True	ATTAAA	-36
PB.5542.1	chr19	-	1295	6	full-splice_match	PLPP2	ENST00000434325.6	1383	6	82	6	-24	0	multi-exon	FALSE	canonical	1	273533	junction_5	92106.57703030767	NA	1	1	TRUE	NA	NA	NA	A	coding	288	867	87	953	20.0	-20	True	AGTAAA	-19
PB.11438.3	chr9	+	5162	25	full-splice_match	JAK2	ENST00000381652.3	5285	25	122	1	122	-1	multi-exon	FALSE	canonical	1	44852	junction_1	46776.506132589915	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	379	3771	20.0	21	False	ATTAAA	-22
PB.9942.3	chr6	-	1744	4	novel_in_catalog	TAF11	novel	1945	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	381048	junction_2	22383.912591164415	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	73	561	15.0	11	True	ATTAAA	-16
PB.9942.2	chr6	-	3032	3	novel_in_catalog	TAF11	novel	1945	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	381048	junction_1	1005.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	114	602	15.0	-30	False	ATTAAA	-17
PB.9942.1	chr6	-	1542	5	full-splice_match	TAF11	ENST00000361288.8	1580	5	38	0	20	0	multi-exon	FALSE	canonical	1	381048	junction_3	25625.083594985597	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	95	730	15.0	-11	True	ATTAAA	-17
PB.11381.5	chr8	+	2877	2	full-splice_match	ZNF623	ENST00000458270.2	2733	2	-142	-2	7	2	multi-exon	FALSE	canonical	1	12646	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	492	1982	20.0	-10	True	AATAAA	-18
PB.7493.2	chr21	-	3259	16	incomplete-splice_match	PAXBP1	ENST00000443785.5	2920	18	7247	-914	7228	-6	5prime_fragment	FALSE	canonical	1	138025	junction_10	79220.48049796774	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	3	980	30.0	7601	False	ATTAAA	-10
PB.7493.1	chr21	-	3528	18	full-splice_match	PAXBP1	ENST00000331923.8	3995	18	460	7	270	-6	multi-exon	FALSE	canonical	1	112570	junction_10	86078.67222352297	NA	0	NA	TRUE	NA	NA	NA	C	coding	731	2196	289	2484	30.0	643	False	ATTAAA	-10
PB.11438.1	chr9	+	4614	25	full-splice_match	JAK2	ENST00000381652.3	5285	25	-12	683	-12	526	multi-exon	TRUE	canonical	1	44852	junction_1	46776.506132589915	NA	0	NA	TRUE	NA	NA	NA	C	coding	1130	3393	513	3905	45.0	-6	True	AATACA	-20
PB.2119.14	chr11	+	3029	19	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	2	-1	intron_retention	FALSE	canonical	1	117760	junction_5	293057.485508258	NA	0	NA	TRUE	NA	NA	NA	C	coding	675	2028	94	2121	10.0	-14	True	AATAAA	-17
PB.2119.15	chr11	+	3205	20	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	13	-1	intron_retention	FALSE	canonical	1	12033	junction_15	351081.5333384774	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	1241	2503	10.0	-3	True	AATAAA	-17
PB.2119.16	chr11	+	2985	19	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	17	-1	intron_retention	FALSE	canonical	1	316131	junction_1	257847.79236520146	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	1066	2910	10.0	1	True	AATAAA	-17
PB.2119.17	chr11	+	3517	19	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	24	-1	intron_retention	FALSE	canonical	1	56656	junction_1	322850.94030420866	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1380	1230	2609	10.0	8	True	AATAAA	-17
PB.2119.10	chr11	+	2838	21	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	56656	junction_1	333975.32663915085	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	271	2763	10.0	-20	True	AATAAA	-17
PB.2119.11	chr11	+	3176	20	novel_in_catalog	TCIRG1	novel	2677	20	NA	NA	-2	0	intron_retention	FALSE	canonical	1	56656	junction_1	316573.55852926767	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	1256	3100	5.0	-18	True	AATAAA	-18
PB.2119.12	chr11	+	3049	19	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	12033	junction_14	306040.0804319632	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	1085	2347	10.0	-18	True	AATAAA	-17
PB.2119.13	chr11	+	2664	20	full-splice_match	TCIRG1	ENST00000265686.7	2677	20	12	1	-1	-1	multi-exon	FALSE	canonical	1	117760	junction_5	288332.4766769323	NA	0	NA	TRUE	NA	NA	NA	C	coding	830	2493	97	2589	10.0	-17	True	AATAAA	-17
PB.11438.7	chr9	+	3179	10	incomplete-splice_match	JAK2	ENST00000381652.3	5285	25	10	60025	10	-10286	3prime_fragment	FALSE	canonical	1	44852	junction_1	37778.835974395064	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	491	1897	85.0	-17	True	NA	NA
PB.2119.18	chr11	+	2899	20	novel_not_in_catalog	TCIRG1	novel	2677	20	NA	NA	25	-1	intron_retention	FALSE	canonical	1	4315	junction_14	301610.636632784	NA	2	NA	TRUE	NA	NA	NA	C	coding	588	1767	1058	2824	10.0	9	True	AATAAA	-17
PB.2119.19	chr11	+	1971	15	full-splice_match	TCIRG1	ENST00000532635.5	2457	15	485	1	97	-1	multi-exon	FALSE	canonical	1	403174	junction_1	217450.21009540485	NA	2	NA	TRUE	NA	NA	NA	C	coding	614	1845	52	1896	10.0	-313	False	AATAAA	-17
PB.11438.6	chr9	+	6749	25	full-splice_match	JAK2	ENST00000381652.3	5285	25	10	-1474	10	1474	multi-exon	FALSE	canonical	1	44852	junction_1	46776.506132589915	NA	3	NA	TRUE	NA	NA	NA	C	coding	1130	3393	491	3883	30.0	-17	True	ATTAAA	-12
PB.11712.5	chr9	+	2846	3	novel_in_catalog	PALM2-AKAP2	novel	7507	11	NA	NA	268216	-1262	no_combination_of_known_junctions	FALSE	canonical	1	136664	junction_1	40191.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	863	2592	29	2620	65.0	-8730	False	AATATA	-9
PB.11438.5	chr9	+	4418	25	full-splice_match	JAK2	ENST00000381652.3	5285	25	8	859	8	350	multi-exon	FALSE	canonical	1	44852	junction_1	46776.506132589915	NA	1	NA	TRUE	NA	NA	NA	C	coding	1130	3393	493	3885	10.0	-19	True	NA	NA
PB.11422.8	chr9	+	7346	48	novel_in_catalog	DOCK8	novel	741	5	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	5654	junction_1	79031.9930290223	NA	0	NA	TRUE	NA	NA	NA	C	coding	2053	6162	153	6314	25.0	0	True	AATAAA	-22
PB.11422.9	chr9	+	6747	45	novel_not_in_catalog	DOCK8	novel	741	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_37	74524.74182625623	NA	1	1	TRUE	NA	NA	NA	C	coding	1601	4806	102	4907	25.0	2	True	AATAAA	-18
PB.11422.6	chr9	+	7135	46	full-splice_match	DOCK8	ENST00000469391.5	6386	46	-24	-725	-2	-4	multi-exon	FALSE	canonical	1	8473	junction_21	75415.21557988804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1999	6000	104	6103	25.0	0	True	AATAAA	-22
PB.11422.7	chr9	+	2721	14	incomplete-splice_match	DOCK8	ENST00000469391.5	6386	46	-24	95366	-2	-12227	3prime_fragment	FALSE	canonical	1	87916	junction_1	49813.54501710953	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	104	1876	90.0	0	True	AAAAAG	-37
PB.11422.4	chr9	+	2451	5	full-splice_match	DOCK8	ENST00000478380.5	1395	5	-20	-1036	-2	-489	multi-exon	FALSE	canonical	1	87916	junction_1	49164.84814122789	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	104	976	20.0	0	True	AATAAA	-21
PB.11422.5	chr9	+	7202	47	novel_not_in_catalog	DOCK8	novel	741	5	NA	NA	-2	9	intron_retention	FALSE	canonical	1	606	junction_36	73653.44115152884	NA	2	NA	TRUE	NA	NA	NA	C	coding	1527	4584	104	4687	15.0	0	True	AATAAA	-39
PB.11422.2	chr9	+	7225	47	full-splice_match	DOCK8	ENST00000453981.5	7237	47	2	10	0	2	multi-exon	FALSE	canonical	1	87916	junction_1	69134.01385423352	NA	71	12	TRUE	NA	NA	NA	C	coding	2031	6096	100	6195	20.0	4	True	AATAAA	-20
PB.11422.3	chr9	+	2762	3	novel_not_in_catalog	DOCK8	novel	741	5	NA	NA	-115	2490	any annotated donor/acceptor	FALSE	canonical	1	674	junction_1	75098.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	1	True	NA	NA
PB.11422.1	chr9	+	7445	48	full-splice_match	DOCK8	ENST00000432829.6	7452	48	0	7	0	-3	multi-exon	FALSE	canonical	1	52719	junction_1	73297.20474053506	NA	0	NA	TRUE	NA	NA	NA	C	coding	2099	6300	113	6412	25.0	-3	True	AATAAA	-23
PB.5259.8	chr17	-	2337	7	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	-8	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70275.01128819231	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	75	1628	50.0	-61	True	NA	NA
PB.5259.9	chr17	-	2257	7	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	-40	-10	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	70275.01128819231	NA	2	1	TRUE	NA	NA	NA	C	coding	517	1554	15	1568	50.0	-1	True	NA	NA
PB.8683.1	chr4	+	3642	8	full-splice_match	WFS1	ENST00000226760.5	3640	8	-3	1	-2	-1	multi-exon	FALSE	canonical	1	100766	junction_1	75401.34233363679	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	174	2846	5.0	-5	True	AATAAA	-20
PB.859.8	chr1	-	1765	2	full-splice_match	CD48	ENST00000368045.3	1793	2	12	16	12	-16	multi-exon	FALSE	canonical	1	1414675	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	29	538	80.0	-1	True	NA	NA
PB.859.9	chr1	-	5538	1	novel_in_catalog	CD48	novel	1126	4	NA	NA	12	-22735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	96	291	29	319	55.0	-1	True	NA	NA
PB.8594.4	chr3	+	4949	14	full-splice_match	TP63	ENST00000264731.7	4909	14	-71	31	-60	-20	multi-exon	FALSE	canonical	1	7202	junction_1	48111.6867155516	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	161	2203	80.0	-33	False	NA	NA
PB.5259.1	chr17	-	2687	6	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	19	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	74574.33551296317	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	48	1535	45.0	-34	True	NA	NA
PB.5259.2	chr17	-	2402	7	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	-10	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	70275.01128819231	NA	3	1	TRUE	NA	NA	NA	C	coding	517	1554	77	1630	45.0	-63	True	NA	NA
PB.5259.3	chr17	-	2756	7	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	15	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70275.01128819231	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	52	1605	45.0	-38	True	NA	NA
PB.5259.4	chr17	-	2599	7	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	6	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70275.01128819231	NA	1	1	TRUE	NA	NA	NA	C	coding	517	1554	61	1614	45.0	-47	True	NA	NA
PB.5259.5	chr17	-	2296	6	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	25	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	74574.33551296317	NA	3	1	TRUE	NA	NA	NA	C	coding	495	1488	42	1529	45.0	-28	True	NA	NA
PB.5259.6	chr17	-	3426	6	full-splice_match	TRIM65	ENST00000269383.7	3439	6	3	10	3	-10	multi-exon	FALSE	canonical	1	93046	junction_5	42924.57186926854	NA	2	NA	TRUE	NA	NA	NA	C	coding	517	1554	64	1617	50.0	-50	True	NA	NA
PB.5259.7	chr17	-	2572	6	novel_not_in_catalog	TRIM65	novel	644	5	NA	NA	25	-10	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	80885.08274978767	NA	23	1	TRUE	NA	NA	NA	C	coding	263	792	42	833	50.0	-28	True	NA	NA
PB.4304.4	chr16	+	4627	14	novel_not_in_catalog	UQCRC2	novel	2615	14	NA	NA	-23	5	any annotated donor/acceptor	FALSE	canonical	1	24813	junction_12	821229.708714968	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	77	1204	15.0	-20	True	AATAAA	-19
PB.4304.5	chr16	+	3735	15	novel_in_catalog	UQCRC2	novel	2615	14	NA	NA	-12	5	intron_retention	FALSE	canonical	1	23929	junction_5	986669.8939381078	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	2547	3554	15.0	-9	True	AATAAA	-19
PB.4304.6	chr16	+	1608	14	full-splice_match	UQCRC2	ENST00000268379.8	2615	14	699	308	-12	5	multi-exon	FALSE	canonical	1	1607321	junction_2	506876.03095667344	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	66	1427	15.0	-9	True	AATAAA	-19
PB.10441.1	chr7	-	2360	10	novel_not_in_catalog	GSDME	novel	2592	10	NA	NA	16	2	any annotated donor/acceptor	FALSE	canonical	1	5119	junction_1	117842.41577255241	NA	3	NA	TRUE	NA	NA	NA	C	coding	435	1308	73	1380	10.0	0	True	ATTAAA	-20
PB.4304.1	chr16	+	5972	13	novel_in_catalog	UQCRC2	novel	2615	14	NA	NA	0	5	intron_retention	FALSE	canonical	1	1607321	junction_2	524371.1384842059	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	127	1254	15.0	0	True	AATAAA	-19
PB.4304.2	chr16	+	1888	14	full-splice_match	UQCRC2	ENST00000268379.8	2615	14	699	28	-12	-28	multi-exon	FALSE	canonical	1	1607321	junction_2	506876.03095667344	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	66	1427	50.0	-9	True	AATAAA	-10
PB.4304.3	chr16	+	1807	12	incomplete-splice_match	UQCRC2	ENST00000561553.5	1415	13	-71	6523	2	-145	3prime_fragment	FALSE	canonical	1	1607321	junction_2	521654.0185991997	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	125	1252	70.0	2	True	TTTAAA	-33
PB.227.2	chr1	+	2135	3	full-splice_match	SNHG3	ENST00000413987.1	2201	3	64	2	64	-2	multi-exon	FALSE	canonical	1	1243745	junction_1	244677.5	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	0	True	AGTAAA	-15
PB.7542.1	chr21	-	869	8	full-splice_match	U2AF1	ENST00000291552.8	962	8	27	66	5	-65	multi-exon	FALSE	canonical	1	635048	junction_1	910290.6469803129	NA	7	2	TRUE	NA	NA	NA	C	coding	240	723	67	789	90.0	-7	True	NA	NA
PB.2766.4	chr12	+	1602	6	full-splice_match	GLIPR1	ENST00000266659.7	5877	6	120	4155	47	405	multi-exon	FALSE	canonical	1	773102	junction_3	103296.02717123248	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	82	882	70.0	-9683	False	TATAAA	-32
PB.249.4	chr1	+	3915	14	novel_in_catalog	KPNA6	novel	7378	14	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	7683	junction_3	97250.54875749101	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	44	1636	100.0	1	True	ATTAAA	-21
PB.9974.1	chr6	-	3782	5	full-splice_match	KCNK5	ENST00000359534.3	3756	5	-25	-1	-25	1	multi-exon	FALSE	canonical	1	76687	junction_2	4499.83285106236	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	365	1864	5.0	-3	True	AATAAA	-19
PB.9974.2	chr6	-	3771	5	novel_not_in_catalog	KCNK5	novel	3756	5	NA	NA	-25	1	any annotated donor/acceptor	FALSE	canonical	1	5716	junction_2	35014.61990726159	NA	1	1	TRUE	NA	NA	NA	C	coding	252	759	1095	1853	5.0	-3	True	AATAAA	-19
PB.9974.3	chr6	-	2159	1	genic	KCNK5	novel	NA	NA	NA	NA	38320	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	155	468	827	1294	5.0	1151	False	AATAAA	-19
PB.4983.1	chr17	-	2894	9	novel_not_in_catalog	ZNF385C	novel	2072	2	NA	NA	6	-2	any annotated donor/acceptor	FALSE	canonical	1	652	junction_7	6818.514115993308	NA	1	NA	TRUE	NA	NA	NA	A	coding	502	1509	67	1575	20.0	-1	True	AATAAA	-15
PB.8594.3	chr3	+	4945	14	full-splice_match	TP63	ENST00000440651.6	2031	14	-168	-2746	-68	-20	multi-exon	FALSE	canonical	1	7202	junction_1	45532.41784726297	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	169	2199	80.0	0	True	NA	NA
PB.1140.3	chr1	+	2346	4	incomplete-splice_match	MIA3	ENST00000470521.1	4071	7	-16	16597	-3	-16597	3prime_fragment	FALSE	canonical	1	92154	junction_1	40483.84998435247	NA	0	NA	TRUE	NA	NA	NA	C	coding	772	2316	29	2344	55.0	-23	True	NA	NA
PB.8594.2	chr3	+	4998	14	novel_not_in_catalog	TP63	novel	546	3	NA	NA	-423	-20	any annotated donor/acceptor	FALSE	canonical	1	5953	junction_1	45707.84092239517	NA	1	NA	TRUE	NA	NA	NA	C	coding	637	1914	339	2252	80.0	-396	False	NA	NA
PB.8346.30	chr3	-	2242	10	full-splice_match	PARP9	ENST00000462315.5	6769	10	-3	4530	-3	-4530	multi-exon	FALSE	canonical	1	25956	junction_9	143577.325845391	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1944	298	2241	65.0	461	False	NA	NA
PB.8486.2	chr3	+	2406	6	full-splice_match	TIPARP	ENST00000295924.11	4109	6	243	1460	243	171	multi-exon	FALSE	canonical	1	258001	junction_1	67828.65692493109	NA	1	NA	TRUE	NA	NA	NA	C	coding	657	1974	254	2227	25.0	-5	True	AATACA	-15
PB.10441.2	chr7	-	2219	10	full-splice_match	GSDME	ENST00000645220.1	2250	10	31	0	31	0	multi-exon	FALSE	canonical	1	65600	junction_9	88010.79803714885	NA	1	NA	TRUE	NA	NA	NA	C	coding	496	1491	58	1548	10.0	15	True	ATTAAA	-18
PB.5690.4	chr19	+	2586	2	novel_not_in_catalog	PIN1	novel	517	2	NA	NA	-4	2	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	161	486	3	488	5.0	1	True	ATTAAA	-15
PB.11328.10	chr8	+	5497	24	full-splice_match	FAM91A1	ENST00000334705.11	5511	24	3	11	3	-11	multi-exon	FALSE	canonical	1	11858	junction_4	105462.14276371308	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	244	2760	40.0	21	True	AATAAA	-19
PB.9953.1	chr6	-	3735	12	full-splice_match	C6orf222	ENST00000437635.2	3736	12	-3	4	-3	-4	multi-exon	FALSE	canonical	1	1591	junction_10	644.519309637708	NA	2	NA	TRUE	NA	NA	NA	A	coding	652	1959	182	2140	25.0	-4	True	AATAAA	-15
PB.430.3	chr1	-	2338	1	novel_in_catalog	PARS2	novel	2347	2	NA	NA	21	-5258	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	coding	104	315	1695	2009	95.0	29	True	NA	NA
PB.4684.1	chr17	+	2154	1	genic	MED11	novel	NA	NA	NA	NA	-12	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	99	297	1856	2152	70.0	-12	True	AAAACA	-21
PB.2018.1	chr11	-	2327	1	antisense	novelGene_STIP1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	111	336	1851	2186	25.0	0	True	NA	NA
PB.5537.1	chr18	-	2495	1	full-splice_match	AC068473.5	ENST00000616428.1	2072	1	-424	1	-424	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	2109	False	NA	NA
PB.6868.1	chr2	+	1807	10	full-splice_match	RBM45	ENST00000286070.9	1785	10	-26	4	5	-1	multi-exon	FALSE	canonical	1	103238	junction_4	13983.914394849146	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	119	1543	35.0	-10	True	AATAAA	-17
PB.10441.3	chr7	-	2015	9	full-splice_match	GSDME	ENST00000409970.6	1997	9	16	-34	5	0	multi-exon	FALSE	canonical	1	8000	junction_8	109500.10989713378	NA	1	NA	TRUE	NA	NA	NA	C	coding	332	999	346	1344	10.0	-11	True	ATTAAA	-18
PB.4807.4	chr17	+	1911	13	full-splice_match	DRG2	ENST00000225729.7	1964	13	53	0	-2	0	multi-exon	FALSE	canonical	1	316183	junction_1	97147.95944331512	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	86	1180	30.0	-9	True	AATAAA	-16
PB.950.2	chr1	-	3865	3	full-splice_match	MRPS14	ENST00000476371.1	2115	3	0	-1750	0	-419	multi-exon	FALSE	canonical	1	654418	junction_2	59639.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	18	404	25.0	-1	True	CATAAA	-23
PB.950.3	chr1	-	3820	3	full-splice_match	MRPS14	ENST00000367677.3	910	3	-14	-2896	-4	-560	multi-exon	FALSE	canonical	1	35295	junction_2	369200.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	113	342	159	500	25.0	-5	True	ATTAAA	-18
PB.12239.9	chrX	-	1945	10	full-splice_match	SEPT6	ENST00000343984.5	2693	10	202	546	202	-546	multi-exon	FALSE	canonical	1	75694	junction_1	333649.9516372744	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	64	1368	95.0	-10	True	NA	NA
PB.12239.8	chrX	-	3204	12	novel_not_in_catalog	SEPT6	novel	2609	11	NA	NA	185	-546	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	341622.82701090927	NA	22	1	TRUE	NA	NA	NA	C	coding	258	777	520	1296	95.0	5	True	NA	NA
PB.950.6	chr1	-	2795	3	full-splice_match	MRPS14	ENST00000476371.1	2115	3	-6	-674	-6	674	multi-exon	FALSE	canonical	1	654418	junction_2	59639.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	24	410	40.0	-7	True	NA	NA
PB.950.7	chr1	-	2207	3	full-splice_match	MRPS14	ENST00000367677.3	910	3	-12	-1285	-2	-2	multi-exon	FALSE	canonical	1	35295	junction_2	369200.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	157	498	30.0	-3	True	NA	NA
PB.12239.5	chrX	-	2008	11	novel_in_catalog	SEPT6	novel	2609	11	NA	NA	185	-545	combination_of_known_junctions	FALSE	canonical	1	65139	junction_1	332146.94803759677	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	81	1364	90.0	5	True	NA	NA
PB.12239.4	chrX	-	3226	11	novel_in_catalog	SEPT6	novel	2609	11	NA	NA	202	-1	combination_of_known_junctions	FALSE	canonical	1	65139	junction_1	332146.94803759677	NA	2	NA	TRUE	NA	NA	NA	C	coding	427	1284	64	1347	15.0	-10	True	ATTAAA	-12
PB.12239.7	chrX	-	3271	11	novel_in_catalog	SEPT6	novel	2609	11	NA	NA	203	-546	combination_of_known_junctions	FALSE	canonical	1	18942	junction_2	344554.54732162517	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	63	1538	95.0	-9	True	NA	NA
PB.1796.2	chr11	+	3567	7	full-splice_match	ZNF215	ENST00000278319.9	3448	7	90	-209	-9	198	multi-exon	FALSE	canonical	1	32898	junction_1	7615.3073787091635	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	499	2052	20.0	-8	True	ATTAAA	-15
PB.1796.3	chr11	+	3419	7	novel_in_catalog	ZNF215	novel	1602	6	NA	NA	-20	-4	intron_retention	FALSE	canonical	1	11577	junction_1	13889.006271948409	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	553	2106	30.0	-19	True	NA	NA
PB.11272.1	chr8	+	2051	1	genic	AP000424.1	novel	NA	NA	NA	NA	-29	-5457	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-57	False	NA	NA
PB.1796.1	chr11	+	3339	7	full-splice_match	ZNF215	ENST00000278319.9	3448	7	115	-6	16	-5	multi-exon	FALSE	canonical	1	32898	junction_1	7615.3073787091635	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	474	2027	25.0	17	True	NA	NA
PB.937.11	chr1	+	3972	8	incomplete-splice_match	SUCO	ENST00000263688.3	5556	24	52439	0	-16493	0	5prime_fragment	FALSE	canonical	1	189445	junction_4	30435.889955573093	NA	2	NA	TRUE	NA	NA	NA	B	coding	749	2250	151	2400	15.0	NA	False	AATAAA	-21
PB.845.4	chr1	-	1789	1	full-splice_match	PIGM	ENST00000368090.4	7039	1	-19	5269	-19	-5269	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	423	1272	272	1543	40.0	9598	False	AATAAA	-17
PB.845.3	chr1	-	1969	1	full-splice_match	PIGM	ENST00000368090.4	7039	1	113	4957	113	-4957	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	423	1272	140	1411	90.0	-16	True	NA	NA
PB.845.2	chr1	-	2088	1	full-splice_match	PIGM	ENST00000368090.4	7039	1	103	4848	103	-4848	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	423	1272	150	1421	100.0	-26	True	NA	NA
PB.845.1	chr1	-	2472	1	full-splice_match	PIGM	ENST00000368090.4	7039	1	105	4462	105	-4462	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	423	1272	148	1419	95.0	-24	True	NA	NA
PB.937.10	chr1	+	3906	10	incomplete-splice_match	SUCO	ENST00000263688.3	5556	24	45984	0	10174	0	5prime_fragment	FALSE	canonical	1	187583	junction_1	34390.85433371014	NA	0	NA	TRUE	NA	NA	NA	B	coding	750	2253	82	2334	15.0	NA	False	AATAAA	-21
PB.2894.2	chr12	+	3721	21	novel_not_in_catalog	ATP2A2	novel	529	5	NA	NA	-21	-83	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	835057.8300533128	NA	2	1	TRUE	NA	NA	NA	B	coding	872	2619	434	3052	20.0	10	True	AATAAA	-18
PB.2894.3	chr12	+	3966	19	novel_not_in_catalog	ATP2A2	novel	529	5	NA	NA	112	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	689911.6126936631	NA	5	1	TRUE	NA	NA	NA	B	coding	917	2754	365	3118	35.0	-9869	False	AATAAA	-20
PB.2894.1	chr12	+	4055	20	novel_not_in_catalog	ATP2A2	novel	529	5	NA	NA	-60	-10	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	804668.8579112733	NA	2	1	TRUE	NA	NA	NA	B	coding	917	2754	456	3209	40.0	-29	True	AATAAA	-18
PB.2062.1	chr11	+	3515	16	full-splice_match	SIPA1	ENST00000534313.5	3521	16	-6	12	-6	0	multi-exon	TRUE	canonical	1	177220	junction_1	177450.3483482508	NA	2	NA	TRUE	NA	NA	NA	C	coding	1042	3129	184	3312	15.0	-45	True	AGTAAA	-14
PB.2894.4	chr12	+	7820	19	novel_not_in_catalog	ATP2A2	novel	529	5	NA	NA	29	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	689911.6126936631	NA	2	1	TRUE	NA	NA	NA	B	coding	917	2754	448	3201	20.0	0	True	AATAAA	-13
PB.2062.2	chr11	+	3608	16	novel_in_catalog	SIPA1	novel	3521	16	NA	NA	-29	0	intron_retention	FALSE	canonical	1	18562	junction_1	198307.1229954408	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3129	277	3405	15.0	0	True	AGTAAA	-14
PB.1522.9	chr10	+	3204	7	novel_in_catalog	FAS	novel	1464	10	NA	NA	11	147	intron_retention	FALSE	canonical	1	143328	junction_5	78427.06176176266	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	210	815	30.0	31	True	ATTAAA	-19
PB.1522.8	chr10	+	1773	9	full-splice_match	FAS	ENST00000355740.6	2563	9	109	681	-12	149	multi-exon	FALSE	canonical	1	143328	junction_7	69939.61711496211	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	112	1119	25.0	-37	True	ATTAAA	-21
PB.3813.1	chr15	+	1510	11	full-splice_match	CCNDBP1	ENST00000300213.8	3660	11	168	1982	-14	-1	multi-exon	FALSE	canonical	1	515913	junction_1	157045.3429177701	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	75	1157	35.0	-14	True	AATAAA	-20
PB.1522.1	chr10	+	2421	9	full-splice_match	FAS	ENST00000355740.6	2563	9	141	1	20	-1	multi-exon	FALSE	canonical	1	143328	junction_7	69939.61711496211	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	80	1087	5.0	-5	True	ATTAAA	-14
PB.1522.3	chr10	+	2436	8	full-splice_match	FAS	ENST00000357339.6	1044	8	-58	-1334	-11	-1	multi-exon	FALSE	canonical	1	30392	junction_5	110853.86788332592	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	158	1102	5.0	1	True	ATTAAA	-14
PB.1522.2	chr10	+	1763	8	full-splice_match	FAS	ENST00000357339.6	1044	8	-68	-651	-21	146	multi-exon	FALSE	canonical	1	30392	junction_5	110853.86788332592	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	168	1112	25.0	-9	True	ATTAAA	-18
PB.1522.5	chr10	+	2065	9	full-splice_match	FAS	ENST00000355740.6	2563	9	-22	520	-22	-267	multi-exon	FALSE	canonical	1	143328	junction_7	69939.61711496211	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	243	1250	55.0	-2	True	NA	NA
PB.1522.4	chr10	+	3793	8	full-splice_match	FAS	ENST00000357339.6	1044	8	-143	-2606	-22	1271	multi-exon	FALSE	canonical	1	30392	junction_5	110853.86788332592	NA	4	NA	TRUE	NA	NA	NA	C	coding	314	945	243	1187	20.0	-2	True	NA	NA
PB.1522.7	chr10	+	3792	7	novel_in_catalog	FAS	novel	1464	10	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	143328	junction_5	78427.06176176266	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	117	722	5.0	-42	True	ATTAAA	-13
PB.1522.6	chr10	+	3739	9	full-splice_match	FAS	ENST00000355740.6	2563	9	99	-1275	-22	1275	multi-exon	FALSE	canonical	1	143328	junction_7	69939.61711496211	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	122	1129	15.0	-47	True	NA	NA
PB.7641.5	chr22	+	3630	10	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5095	10920	any annotated donor/acceptor	FALSE	canonical	1	5091	junction_6	175248.62398811692	NA	2	NA	TRUE	NA	NA	NA	B	coding	135	408	1285	1692	20.0	-27	True	AATAAA	-23
PB.3191.1	chr13	-	4759	22	novel_not_in_catalog	DIS3	novel	10604	21	NA	NA	-11	2045	any annotated donor/acceptor	FALSE	canonical	1	3300	junction_1	141309.19958740033	NA	3	NA	TRUE	NA	NA	NA	C	coding	928	2787	113	2899	25.0	-1	True	AATAAA	-20
PB.7641.7	chr22	+	2203	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5095	-1611	intron_retention	FALSE	canonical	1	13121	junction_3	228778.30849645688	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	45.0	-27	True	ATTAAA	-21
PB.3970.1	chr15	-	3112	19	full-splice_match	STRA6	ENST00000449139.6	2732	19	-383	3	-341	0	multi-exon	FALSE	canonical	1	1103	junction_18	20336.20756499459	NA	0	NA	TRUE	NA	NA	NA	A	coding	667	2004	498	2501	30.0	-350	False	AATAAA	-13
PB.7641.1	chr22	+	3711	6	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5153	138	intron_retention	FALSE	canonical	1	122360	junction_4	182165.99690677732	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-85	False	ATTAAA	-17
PB.7641.3	chr22	+	1049	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5095	-2808	intron_retention	FALSE	canonical	1	122360	junction_4	190993.37243606124	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-27	True	AATACA	-22
PB.7641.2	chr22	+	3606	9	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5132	10918	any annotated donor/acceptor	FALSE	canonical	1	2732	junction_5	177168.14519541705	NA	3	NA	TRUE	NA	NA	NA	B	coding	135	408	1263	1670	25.0	-64	False	AATAAA	-21
PB.7641.9	chr22	+	4265	7	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5083	9259	intron_retention	FALSE	canonical	1	122360	junction_4	174769.85662833534	NA	3	NA	TRUE	NA	NA	NA	B	coding	135	408	3581	3988	45.0	-15	True	NA	NA
PB.7641.8	chr22	+	2729	7	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5087	138	intron_retention	FALSE	canonical	1	78919	junction_5	181334.0593576918	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-19	True	ATTAAA	-17
PB.3191.2	chr13	-	5251	21	full-splice_match	DIS3	ENST00000377780.8	5232	21	-19	0	-11	0	multi-exon	FALSE	canonical	1	77521	junction_19	121249.42400047721	NA	1	NA	TRUE	NA	NA	NA	C	coding	928	2787	113	2899	95.0	-1	True	NA	NA
PB.9355.20	chr5	+	2866	31	full-splice_match	CAST	ENST00000508608.5	2425	31	-78	-363	-25	0	multi-exon	FALSE	canonical	1	137170	junction_1	387569.27916401677	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	163	2427	15.0	-25	True	TTTAAA	-6
PB.11274.9	chr8	-	2775	15	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	2036549.3476140979	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	1399	2331	10.0	0	True	AATAAA	-16
PB.3191.4	chr13	-	4317	21	full-splice_match	DIS3	ENST00000377780.8	5232	21	-19	934	-11	667	multi-exon	FALSE	canonical	1	77521	junction_19	121249.42400047721	NA	1	NA	TRUE	NA	NA	NA	C	coding	928	2787	113	2899	35.0	-1	True	NA	NA
PB.3097.6	chr13	-	3267	1	novel_in_catalog	N4BP2L1	novel	2519	8	NA	NA	-12	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-43	True	AATAAA	-16
PB.3097.7	chr13	-	2377	1	novel_in_catalog	N4BP2L1	novel	2994	5	NA	NA	603	-105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	897	False	NA	NA
PB.3097.4	chr13	-	1939	4	novel_in_catalog	N4BP2L1	novel	2994	5	NA	NA	3	45	intron_retention	FALSE	canonical	1	1837	junction_2	47718.0296394001	NA	1	NA	TRUE	NA	NA	NA	C	coding	104	315	94	408	30.0	-28	True	ATTAAA	-17
PB.3097.5	chr13	-	1610	5	full-splice_match	N4BP2L1	ENST00000380130.6	3046	5	30	1406	-15	-313	multi-exon	FALSE	canonical	1	86158	junction_2	24418.86132045268	NA	4	NA	TRUE	NA	NA	NA	C	coding	243	732	67	798	45.0	-1	True	AATAAA	-9
PB.3097.2	chr13	-	2229	5	full-splice_match	N4BP2L1	ENST00000380139.8	2994	5	-188	953	-10	1	multi-exon	FALSE	canonical	1	37368	junction_2	47817.01727614867	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	240	761	55.0	-21	False	AATAAA	-16
PB.3097.3	chr13	-	2046	5	full-splice_match	N4BP2L1	ENST00000380130.6	3046	5	-10	1010	-10	50	multi-exon	FALSE	canonical	1	86158	junction_2	24418.86132045268	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	107	838	25.0	-41	True	ATTAAA	-22
PB.9033.27	chr4	+	5296	32	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	22931	-7	any annotated donor/acceptor	FALSE	canonical	1	4244	junction_5	125064.90755071166	NA	1	NA	TRUE	NA	NA	NA	C	coding	1435	4308	861	5168	25.0	-10	True	AATAAA	-7
PB.3097.1	chr13	-	3056	5	full-splice_match	N4BP2L1	ENST00000380130.6	3046	5	-10	0	-10	0	multi-exon	FALSE	canonical	1	86158	junction_2	24418.86132045268	NA	2	NA	TRUE	NA	NA	NA	C	coding	243	732	107	838	25.0	-41	True	AATAAA	-21
PB.8914.7	chr4	-	2395	1	novel_in_catalog	INTS12	novel	1710	8	NA	NA	-5	-6325	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-6	True	NA	NA
PB.5087.12	chr17	+	2191	13	novel_in_catalog	CALCOCO2	novel	3682	13	NA	NA	0	424	combination_of_known_junctions	FALSE	canonical	1	6297	junction_1	315826.00645277725	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	195	1319	15.0	0	True	AATAAA	-16
PB.5087.11	chr17	+	1459	13	full-splice_match	CALCOCO2	ENST00000258947.7	3682	13	45	2178	-1	17	multi-exon	FALSE	canonical	1	506792	junction_1	213556.43494070446	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	57	1397	35.0	-2	True	AATAGA	-19
PB.5087.10	chr17	+	2314	13	novel_in_catalog	CALCOCO2	novel	3682	13	NA	NA	-3	543	combination_of_known_junctions	FALSE	canonical	1	6297	junction_1	315826.00645277725	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	199	1323	25.0	-4	True	AATAAA	-20
PB.6973.10	chr2	+	2502	9	full-splice_match	CREB1	ENST00000432329.6	7650	9	51	5097	3	545	multi-exon	FALSE	canonical	1	93908	junction_4	124556.02006501934	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	207	1226	25.0	-19	True	AAAAAG	-25
PB.10091.13	chr6	-	2851	25	novel_in_catalog	SNX14	novel	3348	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	20359	junction_4	152053.35412715402	NA	1	NA	TRUE	NA	NA	NA	C	coding	831	2496	188	2683	20.0	-30	True	AATAAA	-30
PB.1153.26	chr1	+	2472	5	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-646	-2	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24705.00836242522	NA	1	NA	TRUE	NA	NA	NA	C	coding	123	372	910	1281	30.0	-2491	False	ATTAAA	-11
PB.1153.27	chr1	+	2467	6	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-589	2	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18777.7684361055	NA	1	NA	TRUE	NA	NA	NA	C	coding	139	420	853	1272	20.0	-2434	False	ATTAAA	-15
PB.1153.20	chr1	+	4193	1	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-1	-3594	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.1153.21	chr1	+	2423	5	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-1	1660	combination_of_known_junctions	FALSE	canonical	1	1027	junction_1	1801.2186846687994	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	ATTAAA	-17
PB.1153.22	chr1	+	2130	9	novel_not_in_catalog	CNIH3	novel	876	6	NA	NA	-1	15	any annotated donor/acceptor	FALSE	canonical	1	28	junction_3	21858.606989010073	NA	13	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	ATTAAA	-28
PB.10091.12	chr6	-	2954	28	novel_in_catalog	SNX14	novel	3348	26	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	1	13280	junction_27	147415.31099483426	NA	0	NA	TRUE	NA	NA	NA	C	coding	885	2658	129	2786	20.0	5	True	AATAAA	-30
PB.7496.1	chr21	+	1923	7	full-splice_match	IL10RB	ENST00000290200.6	1963	7	38	2	14	-2	multi-exon	FALSE	canonical	1	167613	junction_1	85496.71044484044	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	71	1048	15.0	29	True	ATTAAA	-35
PB.177.23	chr1	+	3651	17	novel_in_catalog	SRRM1	novel	480	5	NA	NA	-3	3	intron_retention	FALSE	canonical	1	38943	junction_5	202293.69962321143	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2625	43	2667	20.0	-17	True	AATAAA	-20
PB.5680.6	chr19	+	3960	6	full-splice_match	ZNF317	ENST00000360385.7	3955	6	0	-5	0	0	multi-exon	FALSE	canonical	1	39845	junction_4	62154.61473969572	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	289	1980	20.0	0	True	NA	NA
PB.7128.1	chr20	-	2516	2	full-splice_match	SRXN1	ENST00000381962.3	2698	2	171	11	171	-11	multi-exon	FALSE	canonical	1	347550	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	137	414	15	428	55.0	0	True	NA	NA
PB.10091.17	chr6	-	3128	27	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	-27	0	any annotated donor/acceptor	FALSE	canonical	1	1940	junction_26	182266.5548425684	NA	17	2	TRUE	NA	NA	NA	C	coding	907	2724	244	2967	40.0	10	True	AATAAA	-23
PB.2376.1	chr11	+	3672	10	novel_not_in_catalog	JAM3	novel	3912	9	NA	NA	-34	-4	any annotated donor/acceptor	FALSE	canonical	1	3001	junction_5	145688.03640198693	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	48	1106	30.0	-5	True	TATAAA	-13
PB.5680.4	chr19	+	3971	8	novel_not_in_catalog	ZNF317	novel	4073	7	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	canonical	1	20703	junction_7	60743.398048928844	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	291	2078	15.0	-2	True	NA	NA
PB.6973.11	chr2	+	2852	9	full-splice_match	CREB1	ENST00000432329.6	7650	9	51	4747	3	-498	multi-exon	FALSE	canonical	1	93908	junction_4	124556.02006501934	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	207	1226	65.0	-19	True	NA	NA
PB.2376.2	chr11	+	3540	9	full-splice_match	JAM3	ENST00000299106.8	3912	9	118	254	-28	-4	multi-exon	FALSE	canonical	1	233488	junction_1	56340.13588561333	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	42	974	30.0	1	True	TATAAA	-13
PB.4446.9	chr16	-	1581	7	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	0	28	intron_retention	FALSE	non_canonical	0	0	junction_3	127439.1428486554	NA	1	NA	TRUE	NA	NA	NA	B	coding	254	765	235	999	25.0	-1	True	AGTAAA	-43
PB.4446.8	chr16	-	2109	8	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	-4	200	intron_retention	FALSE	non_canonical	0	0	junction_3	144586.47709087812	NA	1	NA	TRUE	NA	NA	NA	B	coding	254	765	591	1355	55.0	-6	True	AATAAA	-20
PB.5680.5	chr19	+	4576	6	novel_in_catalog	ZNF317	novel	4073	7	NA	NA	0	1	intron_retention	FALSE	canonical	1	97811	junction_1	39376.7411835972	NA	2	NA	TRUE	NA	NA	NA	C	coding	510	1533	1063	2595	20.0	0	True	NA	NA
PB.4446.1	chr16	-	2938	8	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	-4	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	141800.4907410696	NA	1	1	TRUE	NA	NA	NA	B	coding	135	408	358	765	25.0	-6	True	AATAAA	-11
PB.5680.2	chr19	+	3922	6	novel_in_catalog	ZNF317	novel	4073	7	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	1215	junction_2	69697.73720286763	NA	1	NA	TRUE	NA	NA	NA	C	coding	510	1533	410	1942	20.0	-3	True	NA	NA
PB.4446.3	chr16	-	2647	7	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	-17	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	141181.55799625532	NA	1	1	TRUE	NA	NA	NA	B	coding	135	408	67	474	25.0	259	False	AATAAA	-11
PB.4446.2	chr16	-	2815	7	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	0	-7	intron_retention	TRUE	non_canonical	0	0	junction_3	127439.1428486554	NA	1	1	TRUE	NA	NA	NA	B	coding	135	408	235	642	25.0	-1	True	AATAAA	-11
PB.4446.5	chr16	-	1986	7	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	0	437	intron_retention	FALSE	non_canonical	0	0	junction_3	136296.48133470732	NA	1	NA	TRUE	NA	NA	NA	B	coding	254	765	231	995	5.0	-1	True	NA	NA
PB.4446.4	chr16	-	2214	2	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-11
PB.4446.7	chr16	-	1770	7	novel_not_in_catalog	FAM192A	novel	2848	7	NA	NA	-5	211	intron_retention	FALSE	non_canonical	0	0	junction_3	127439.1428486554	NA	1	NA	TRUE	NA	NA	NA	B	coding	254	765	241	1005	35.0	-7	True	AATAAA	-31
PB.2726.19	chr12	+	3992	26	novel_not_in_catalog	XPOT	novel	6414	25	NA	NA	112	-2442	any annotated donor/acceptor	FALSE	canonical	1	585	junction_23	207779.3825672066	NA	2	1	TRUE	NA	NA	NA	C	coding	1006	3021	418	3438	20.0	1	True	AATAAA	-17
PB.2524.2	chr12	+	2696	15	novel_in_catalog	CCDC91	novel	518	6	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	9730	junction_2	113332.52329914851	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	379	1704	10.0	1	True	AATAAA	-17
PB.2524.3	chr12	+	1339	13	novel_not_in_catalog	CCDC91	novel	518	6	NA	NA	1	-7	any annotated donor/acceptor	FALSE	canonical	1	898	junction_9	126448.11102942473	NA	6	2	TRUE	NA	NA	NA	C	coding	324	972	367	1338	70.0	-17	True	AAAAAG	-34
PB.2524.1	chr12	+	2520	13	novel_in_catalog	CCDC91	novel	518	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	16745	junction_4	102497.7825955274	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	231	1529	10.0	0	True	AATAAA	-16
PB.2524.6	chr12	+	2407	11	novel_in_catalog	CCDC91	novel	518	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	14807	junction_1	99003.26434926274	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	576	1415	10.0	-12	True	AATAAA	-17
PB.2524.7	chr12	+	2692	15	novel_in_catalog	CCDC91	novel	518	6	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	3863	junction_1	128303.99183158085	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	471	1700	10.0	-6	True	AATAAA	-17
PB.2524.4	chr12	+	2740	16	full-splice_match	CCDC91	ENST00000545336.5	2738	16	-3	1	-1	0	multi-exon	FALSE	canonical	1	26638	junction_3	117292.93070530721	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	423	1748	10.0	-13	True	AATAAA	-17
PB.2524.5	chr12	+	2612	14	novel_in_catalog	CCDC91	novel	518	6	NA	NA	-1	-1	no_combination_of_known_junctions	FALSE	canonical	1	3863	junction_1	105378.09368871433	NA	11	2	TRUE	NA	NA	NA	C	coding	441	1326	296	1621	10.0	-13	True	AATAAA	-16
PB.2524.8	chr12	+	2523	13	novel_in_catalog	CCDC91	novel	518	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	81556	junction_1	78033.28615240457	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	206	1531	10.0	-5	True	AATAAA	-17
PB.2524.9	chr12	+	3143	1	novel_in_catalog	CCDC91	novel	518	6	NA	NA	-9	-62238	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	1	True	NA	NA
PB.8083.26	chr3	-	2439	9	novel_in_catalog	MAP4	novel	5590	18	NA	NA	-47	4745	combination_of_known_junctions	FALSE	canonical	1	95533	junction_1	356486.1492011076	NA	0	NA	TRUE	NA	NA	NA	C	coding	768	2304	136	2439	70.0	-41	True	NA	NA
PB.12227.1	chrX	-	4943	21	full-splice_match	LRCH2	ENST00000317135.12	4929	21	-24	10	-24	0	multi-exon	TRUE	canonical	1	22872	junction_20	8924.782537966961	NA	0	NA	TRUE	NA	NA	NA	A	coding	765	2298	56	2353	55.0	-1	True	GATAAA	-5
PB.8083.25	chr3	-	4939	18	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-49	302	no_combination_of_known_junctions	FALSE	canonical	1	100083	junction_13	366678.69183637784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1111	3336	138	3473	45.0	-43	True	AATAAA	-7
PB.11701.1	chr9	+	4418	14	full-splice_match	FSD1L	ENST00000481272.5	1804	14	-85	-2529	-17	2302	multi-exon	FALSE	canonical	1	3696	junction_1	23749.13751582491	NA	3	2	TRUE	NA	NA	NA	C	coding	530	1593	205	1797	10.0	-106	True	ATTAAA	-15
PB.8461.2	chr3	-	5046	7	full-splice_match	WWTR1	ENST00000360632.7	2103	7	66	-3009	6	-1	multi-exon	FALSE	canonical	1	300895	junction_6	96091.92573028994	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	275	1477	15.0	-11	True	AATAAA	-16
PB.8461.6	chr3	-	4534	6	full-splice_match	WWTR1	ENST00000472417.1	955	6	30	-3609	30	3	multi-exon	FALSE	canonical	1	2246	junction_5	207533.96246340018	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	233	961	15.0	-1	True	AATAAA	-20
PB.8461.7	chr3	-	4127	8	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-2	3	any annotated donor/acceptor	FALSE	canonical	1	1370	junction_1	178852.70053930994	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	267	1517	15.0	-3	True	AATAAA	-20
PB.8461.8	chr3	-	4994	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	12859	junction_6	185930.3763524281	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	222	1424	10.0	-18	True	AATAAA	-17
PB.8461.9	chr3	-	4968	7	novel_not_in_catalog	WWTR1	novel	5030	8	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	2385	junction_1	166005.1862108196	NA	8	NA	TRUE	NA	NA	NA	C	coding	374	1125	275	1399	15.0	-11	True	AATAAA	-16
PB.7083.1	chr2	+	4483	25	novel_in_catalog	TRPM8	novel	5621	26	NA	NA	-33	-11	combination_of_known_junctions	FALSE	canonical	1	325	junction_2	48117.13102447029	NA	1	NA	TRUE	NA	NA	NA	A	coding	1054	3165	148	3312	50.0	NA	False	AATAAA	-16
PB.264.5	chr1	+	1531	7	novel_in_catalog	S100PBP	novel	725	3	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	78402	junction_3	87281.31572297323	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	156	1379	20.0	1	True	TTTAAA	-26
PB.6133.2	chr19	+	3589	22	novel_not_in_catalog	TRPM4	novel	594	5	NA	NA	-10	1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_21	83197.08232540559	NA	0	NA	TRUE	NA	NA	NA	C	coding	1082	3249	112	3360	15.0	-17	True	AATAAA	-15
PB.6133.3	chr19	+	4073	25	full-splice_match	TRPM4	ENST00000252826.9	4109	25	34	2	9	0	multi-exon	FALSE	canonical	1	71880	junction_3	163225.02643768612	NA	0	NA	TRUE	NA	NA	NA	C	coding	1214	3645	93	3737	20.0	2	True	AATAAA	-14
PB.6133.1	chr19	+	1876	2	full-splice_match	TRPM4	ENST00000599628.5	1829	2	-47	0	4	0	multi-exon	FALSE	canonical	1	140429	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-28	True	NA	NA
PB.11536.12	chr9	-	3069	12	full-splice_match	GNE	ENST00000377902.5	2565	12	-4	-500	-4	253	multi-exon	FALSE	canonical	1	78734	junction_11	41011.574087573084	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	226	2394	75.0	2	False	NA	NA
PB.264.3	chr1	+	4263	7	full-splice_match	S100PBP	ENST00000373475.9	4322	7	54	5	17	-5	multi-exon	FALSE	canonical	1	109886	junction_1	74642.10594954656	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	201	1427	20.0	-14	True	AATAAA	-16
PB.7035.2	chr2	+	2300	6	novel_not_in_catalog	SGPP2	novel	3336	5	NA	NA	-540	155	any annotated donor/acceptor	FALSE	canonical	1	440	junction_5	50522.53226986945	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	268	1083	80.0	7	True	NA	NA
PB.7035.3	chr2	+	1422	5	full-splice_match	SGPP2	ENST00000321276.7	3336	5	23	1891	23	-1891	multi-exon	FALSE	canonical	1	54843	junction_1	27932.83029877209	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	64	1263	25.0	-3	True	GATAAA	-22
PB.5118.8	chr17	-	4884	31	novel_in_catalog	SPAG9	novel	8273	30	NA	NA	-23	2	combination_of_known_junctions	FALSE	canonical	1	90347	junction_26	161091.23046985932	NA	2	NA	TRUE	NA	NA	NA	C	coding	1334	4005	233	4237	35.0	7230	False	AATAAA	-19
PB.7035.1	chr2	+	1278	5	novel_not_in_catalog	SGPP2	novel	3336	5	NA	NA	-579	-1894	any annotated donor/acceptor	FALSE	canonical	1	20417	junction_1	41232.70366165673	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	307	1122	30.0	-32	True	GATAAA	-19
PB.5118.6	chr17	-	4786	29	full-splice_match	SPAG9	ENST00000357122.8	4761	29	-11	-14	-11	-3	multi-exon	FALSE	canonical	1	249683	junction_3	109228.95817436485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1307	3924	221	4144	35.0	7242	False	AATAAA	-14
PB.5118.7	chr17	-	6983	29	novel_in_catalog	SPAG9	novel	8273	30	NA	NA	0	3	intron_retention	FALSE	canonical	1	90347	junction_24	142558.75188282112	NA	2	NA	TRUE	NA	NA	NA	C	coding	1180	3543	210	3752	35.0	-1	True	AATAAA	-20
PB.5118.4	chr17	-	4297	27	full-splice_match	SPAG9	ENST00000510283.5	4949	27	73	579	32	-10	multi-exon	FALSE	canonical	1	55924	junction_26	157755.65170577535	NA	8	NA	TRUE	NA	NA	NA	C	coding	1177	3534	146	3679	35.0	-6	True	ATTAAA	-18
PB.5118.5	chr17	-	4848	30	novel_in_catalog	SPAG9	novel	8273	30	NA	NA	-28	3	combination_of_known_junctions	FALSE	canonical	1	139793	junction_4	131803.23446883648	NA	0	NA	TRUE	NA	NA	NA	C	coding	1320	3963	238	4200	35.0	7225	False	AATAAA	-20
PB.5118.2	chr17	-	5357	29	full-splice_match	SPAG9	ENST00000357122.8	4761	29	-27	-569	-27	0	multi-exon	FALSE	canonical	1	249683	junction_3	109228.95817436485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1307	3924	237	4160	65.0	7226	False	AGTAAA	-37
PB.5118.3	chr17	-	5387	30	full-splice_match	SPAG9	ENST00000262013.11	8273	30	-18	2904	-18	-3	multi-exon	FALSE	canonical	1	90347	junction_25	147019.78043512185	NA	11	NA	TRUE	NA	NA	NA	C	coding	1321	3966	228	4193	70.0	7235	False	AGTAAA	-34
PB.5118.1	chr17	-	7653	31	novel_not_in_catalog	SPAG9	novel	8273	30	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	1	388	junction_1	168788.18244279822	NA	0	NA	TRUE	NA	NA	NA	C	coding	1321	3966	213	4178	15.0	-4	True	NA	NA
PB.10750.9	chr7	+	4124	4	full-splice_match	ORAI2	ENST00000495936.5	937	4	35	-3222	0	-1412	multi-exon	FALSE	canonical	1	162615	junction_1	80456.31495828445	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	215	979	90.0	-5	True	NA	NA
PB.10750.8	chr7	+	2670	4	full-splice_match	ORAI2	ENST00000356387.6	10811	4	36	8105	-4	0	multi-exon	FALSE	canonical	1	3967	junction_1	153256.12876561322	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	242	1006	85.0	-9	True	NA	NA
PB.10797.8	chr7	+	2371	6	novel_in_catalog	TES	novel	2782	7	NA	NA	3	-21	intron_retention	FALSE	canonical	1	545445	junction_3	173189.52437996934	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	1411	2298	80.0	15	True	NA	NA
PB.10797.9	chr7	+	1990	6	novel_in_catalog	TES	novel	2782	7	NA	NA	6	-502	combination_of_known_junctions	FALSE	canonical	1	9099	junction_4	324684.5865282798	NA	2	NA	TRUE	NA	NA	NA	C	coding	349	1050	142	1191	30.0	-728	False	NA	NA
PB.10750.1	chr7	+	2705	4	novel_not_in_catalog	ORAI2	novel	463	3	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	13254	junction_1	148940.28247813508	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	277	1041	85.0	-26	True	NA	NA
PB.10797.7	chr7	+	2698	7	full-splice_match	TES	ENST00000358204.8	2782	7	83	1	15	-1	multi-exon	FALSE	canonical	1	545445	junction_4	158701.49541137146	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	133	1398	30.0	-4	True	AATAAA	-16
PB.10750.3	chr7	+	4182	4	novel_not_in_catalog	ORAI2	novel	463	3	NA	NA	4	-1412	any annotated donor/acceptor	FALSE	canonical	1	13254	junction_1	148940.28247813508	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	273	1037	90.0	-22	True	NA	NA
PB.10750.2	chr7	+	2858	4	full-splice_match	ORAI2	ENST00000495936.5	937	4	28	-1949	-7	192	multi-exon	FALSE	canonical	1	162615	junction_1	80456.31495828445	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	222	986	35.0	-12	True	NA	NA
PB.10750.5	chr7	+	2550	3	full-splice_match	ORAI2	ENST00000403646.7	2528	3	-22	0	5	0	multi-exon	FALSE	canonical	1	24919	junction_1	134310.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	122	886	85.0	-21	True	NA	NA
PB.10750.4	chr7	+	3674	4	full-splice_match	ORAI2	ENST00000495936.5	937	4	26	-2763	-9	1006	multi-exon	FALSE	canonical	1	162615	junction_1	80456.31495828445	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	224	988	10.0	-14	True	NA	NA
PB.10750.7	chr7	+	2370	3	full-splice_match	ORAI2	ENST00000403646.7	2528	3	-13	171	-7	-171	multi-exon	FALSE	canonical	1	24919	junction_1	134310.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	113	877	70.0	-12	True	NA	NA
PB.10750.6	chr7	+	2486	4	full-splice_match	ORAI2	ENST00000495936.5	937	4	21	-1570	7	-171	multi-exon	FALSE	canonical	1	162615	junction_1	80456.31495828445	NA	0	NA	TRUE	NA	NA	NA	C	coding	254	765	229	993	70.0	-19	True	NA	NA
PB.12237.3	chrX	+	3201	2	full-splice_match	UBE2A	ENST00000628734.1	600	2	-1597	-1004	436	3	multi-exon	FALSE	canonical	1	1408780	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	5882	False	AATAAA	-17
PB.12237.2	chrX	+	1604	5	full-splice_match	UBE2A	ENST00000628549.1	934	5	131	-801	131	-3	multi-exon	FALSE	canonical	1	655146	junction_2	285190.97683778056	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	78	437	25.0	-10	True	AATAAA	-18
PB.12237.1	chrX	+	1777	6	full-splice_match	UBE2A	ENST00000371558.6	1874	6	96	1	0	-1	multi-exon	FALSE	canonical	1	596812	junction_1	287888.6718438223	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	150	608	20.0	0	True	AATAAA	-20
PB.8346.13	chr3	-	2365	9	novel_not_in_catalog	PARP9	novel	3128	11	NA	NA	0	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	175925.40899088277	NA	3	NA	TRUE	NA	NA	NA	C	coding	372	1119	809	1927	40.0	21	True	AATAAA	-17
PB.7029.9	chr2	-	3058	13	novel_in_catalog	DNPEP	novel	2408	15	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	349876	junction_12	166749.8158991154	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	149	1132	15.0	-6	True	ATTAAA	-17
PB.7029.8	chr2	-	1674	15	full-splice_match	DNPEP	ENST00000273075.8	2425	15	104	647	-4	1	multi-exon	FALSE	canonical	1	349876	junction_14	162308.04878166463	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	148	1575	10.0	-5	True	ATTAAA	-19
PB.7029.5	chr2	-	2186	15	full-splice_match	DNPEP	ENST00000273075.8	2425	15	79	160	-4	-160	multi-exon	FALSE	canonical	1	349876	junction_14	162308.04878166463	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	173	1600	60.0	-30	True	NA	NA
PB.7968.1	chr3	+	3987	6	full-splice_match	PLCL2	ENST00000615277.4	4147	6	171	-11	171	11	multi-exon	FALSE	canonical	1	88587	junction_1	47747.04888053292	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	289	3294	30.0	128	False	ATTAAA	-27
PB.7029.7	chr2	-	1839	15	full-splice_match	DNPEP	ENST00000273075.8	2425	15	79	507	-4	141	multi-exon	FALSE	canonical	1	349876	junction_14	162308.04878166463	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	173	1600	15.0	-30	True	NA	NA
PB.7029.6	chr2	-	2027	15	full-splice_match	DNPEP	ENST00000520694.6	2408	15	201	180	197	-161	multi-exon	FALSE	canonical	1	42950	junction_14	216917.37079472194	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	27	1442	55.0	311	False	NA	NA
PB.7029.1	chr2	-	3832	15	full-splice_match	DNPEP	ENST00000273075.8	2425	15	109	-1516	1	1497	multi-exon	FALSE	canonical	1	349876	junction_14	162308.04878166463	NA	3	NA	TRUE	NA	NA	NA	C	coding	475	1428	143	1570	10.0	0	True	NA	NA
PB.6218.1	chr19	+	2287	9	full-splice_match	KMT5C	ENST00000255613.7	2308	9	28	-7	5	7	multi-exon	FALSE	canonical	1	73688	junction_6	41826.718192442495	NA	0	NA	TRUE	NA	NA	NA	A	coding	462	1389	221	1609	0.0	-5	True	ATTAAA	-25
PB.7029.3	chr2	-	2743	15	full-splice_match	DNPEP	ENST00000373963.5	1657	15	22	-1108	0	439	multi-exon	FALSE	canonical	1	75252	junction_13	218183.02735342897	NA	3	NA	TRUE	NA	NA	NA	C	coding	432	1299	241	1539	90.0	-1	True	NA	NA
PB.7029.2	chr2	-	2797	15	full-splice_match	DNPEP	ENST00000273075.8	2425	15	86	-458	0	439	multi-exon	FALSE	canonical	1	349876	junction_14	162308.04878166463	NA	2	NA	TRUE	NA	NA	NA	C	coding	475	1428	166	1593	90.0	-23	True	NA	NA
PB.4171.6	chr16	+	3057	15	incomplete-splice_match	TRAF7	ENST00000326181.10	3700	21	15806	71	-1942	-71	5prime_fragment	FALSE	canonical	1	652605	junction_1	101661.49462210861	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	293	1573	10.0	1175	False	AATATA	-14
PB.4171.4	chr16	+	2445	21	novel_not_in_catalog	TRAF7	novel	799	4	NA	NA	2	-1191	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	215712.75489951915	NA	1	NA	TRUE	NA	NA	NA	C	coding	570	1713	369	2081	15.0	-2	True	AATAAA	-17
PB.4171.5	chr16	+	2480	21	full-splice_match	TRAF7	ENST00000326181.10	3700	21	29	1191	-10	-1191	multi-exon	FALSE	canonical	1	435782	junction_1	133895.31290549345	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	104	2116	15.0	12	True	AATAAA	-17
PB.4171.2	chr16	+	2452	20	novel_in_catalog	TRAF7	novel	799	4	NA	NA	19	-1179	no_combination_of_known_junctions	TRUE	canonical	1	3866	junction_4	220117.93239770707	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	181	2076	25.0	-8192	False	AATAAA	-29
PB.4171.3	chr16	+	2520	21	novel_in_catalog	TRAF7	novel	799	4	NA	NA	-4	-1193	combination_of_known_junctions	FALSE	canonical	1	18361	junction_2	216028.40537348323	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	233	2158	15.0	-8	True	AATAAA	-15
PB.4171.1	chr16	+	3615	21	full-splice_match	TRAF7	ENST00000326181.10	3700	21	18	67	5	-67	multi-exon	FALSE	canonical	1	435782	junction_1	133895.31290549345	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	115	2127	5.0	1	True	AATATA	-18
PB.1199.3	chr1	-	3756	6	novel_not_in_catalog	EGLN1	novel	7097	5	NA	NA	-1955	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	226220.54511772355	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	420	1097	15.0	-12	True	ATTAAA	-28
PB.7968.2	chr3	+	3405	6	full-splice_match	PLCL2	ENST00000615277.4	4147	6	258	484	258	-483	multi-exon	FALSE	canonical	1	88587	junction_1	47747.04888053292	NA	7	NA	TRUE	NA	NA	NA	C	coding	1001	3006	202	3207	40.0	215	False	AATAAA	-14
PB.864.13	chr1	-	2824	9	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-9	1380	intron_retention	FALSE	non_canonical	0	0	junction_2	282022.0445726495	NA	3	1	TRUE	NA	NA	NA	B	coding	276	831	80	910	20.0	-10	True	AGTAAA	-29
PB.6990.93	chr2	-	7952	46	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1096730	junction_8	2999504.6146272197	NA	0	NA	TRUE	NA	NA	NA	C	coding	2331	6996	267	7262	30.0	-1	True	AATAAA	-15
PB.1199.1	chr1	-	4314	4	novel_in_catalog	EGLN1	novel	7097	5	NA	NA	-1987	-1	no_combination_of_known_junctions	FALSE	canonical	1	50326	junction_1	249019.20272719712	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	443	1594	15.0	0	True	ATTAAA	-28
PB.11625.76	chr9	-	1996	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-30	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	753674.9404969286	NA	5	1	TRUE	NA	NA	NA	B	coding	377	1134	176	1309	10.0	-13	True	AATAAA	-13
PB.3765.1	chr15	+	3139	7	full-splice_match	FAM98B	ENST00000491535.5	3111	7	-27	-1	0	1	multi-exon	FALSE	canonical	1	268849	junction_3	104531.48753472429	NA	1	1	TRUE	NA	NA	NA	A	coding	319	960	69	1028	95.0	0	True	NA	NA
PB.1954.2	chr11	-	2741	8	novel_in_catalog	LPXN	novel	2099	10	NA	NA	5	-5	intron_retention	FALSE	canonical	1	488267	junction_6	62162.536582801724	NA	7	NA	TRUE	NA	NA	NA	C	coding	194	585	85	669	35.0	-1	True	AATAAA	-16
PB.1954.3	chr11	-	1876	9	novel_in_catalog	LPXN	novel	2099	10	NA	NA	31	-5	combination_of_known_junctions	FALSE	canonical	1	9009	junction_8	195263.23159163728	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	426	1298	35.0	-33	True	AATAAA	-16
PB.8083.21	chr3	-	4755	17	novel_in_catalog	MAP4	novel	3724	10	NA	NA	-95	302	no_combination_of_known_junctions	FALSE	canonical	1	45376	junction_4	415442.08737176424	NA	1	NA	TRUE	NA	NA	NA	C	coding	1067	3204	184	3387	45.0	-2	True	AATAAA	-7
PB.6990.90	chr2	-	8120	45	novel_in_catalog	FN1	novel	8103	45	NA	NA	0	0	intron_retention	FALSE	canonical	1	2230192	junction_20	2768075.0683378503	NA	0	NA	TRUE	NA	NA	NA	C	coding	2387	7164	267	7430	30.0	-1	True	AATAAA	-15
PB.1954.6	chr11	-	1953	1	novel_in_catalog	LPXN	novel	1879	9	NA	NA	23	-21436	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	119	360	949	1308	90.0	-41	True	NA	NA
PB.1954.4	chr11	-	1824	9	full-splice_match	LPXN	ENST00000395074.6	1833	9	4	5	4	-5	multi-exon	FALSE	canonical	1	488267	junction_7	59309.25184454256	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	86	1246	35.0	-2	True	AATAAA	-16
PB.1954.5	chr11	-	1827	8	novel_in_catalog	LPXN	novel	2099	10	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	1	17047	junction_6	202231.99776766793	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	149	1249	35.0	3704	False	AATAAA	-16
PB.10436.25	chr7	-	3117	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	-19	1152	-19	-120	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	377	2116	50.0	4	True	AATAAA	-22
PB.10436.24	chr7	-	3249	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	83	918	-24	0	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	275	2014	70.0	22	True	GATAAA	-3
PB.10436.27	chr7	-	2800	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	-22	1472	-22	-440	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	380	2119	45.0	1	True	AATAAA	-16
PB.10436.26	chr7	-	2881	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	14	1355	2	-323	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	344	2083	40.0	3	True	NA	NA
PB.10436.21	chr7	-	2930	15	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	137	0	combination_of_known_junctions	FALSE	canonical	1	5782	junction_14	43358.99816129312	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	427	1695	70.0	7399	False	GATAAA	-3
PB.10436.20	chr7	-	3000	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	408	842	-43	76	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	2	NA	TRUE	NA	NA	NA	C	coding	422	1269	421	1689	70.0	6705	False	AGTAAA	-41
PB.702.3	chr1	-	5675	27	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-5	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	13358.967176532347	NA	1	1	TRUE	NA	NA	NA	B	coding	942	2829	1329	4157	10.0	NA	False	ATTAAA	-16
PB.702.2	chr1	-	5667	27	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-16	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	13358.967176532347	NA	3	NA	TRUE	NA	NA	NA	B	coding	942	2829	1321	4149	10.0	NA	False	ATTAAA	-16
PB.10436.29	chr7	-	2186	15	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-148	217	combination_of_known_junctions	FALSE	canonical	1	5782	junction_14	43358.99816129312	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	76	1980	80.0	7114	False	NA	NA
PB.10436.28	chr7	-	2327	15	full-splice_match	IGF2BP3	ENST00000258729.7	4250	15	-24	1947	-24	217	multi-exon	FALSE	canonical	1	18878	junction_10	39515.39795259616	NA	0	NA	TRUE	NA	NA	NA	C	coding	579	1740	382	2121	80.0	-1	True	NA	NA
PB.702.5	chr1	-	3183	13	incomplete-splice_match	NBPF9	ENST00000613969.4	4624	20	9451	106	3006	-1	5prime_fragment	FALSE	canonical	0	0	junction_1	2280.793806745557	NA	4	NA	TRUE	NA	NA	NA	B	coding	481	1446	221	1666	15.0	6328	False	ATTAAA	-15
PB.702.4	chr1	-	5946	28	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	-53	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	11427.528512859133	NA	0	NA	TRUE	NA	NA	NA	B	coding	942	2829	1601	4429	15.0	NA	False	ATTAAA	-15
PB.7087.1	chr2	+	3105	8	full-splice_match	COPS8	ENST00000354371.6	4007	8	575	327	1	-327	multi-exon	FALSE	canonical	1	141991	junction_3	124694.74912156405	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	79	708	20.0	-27	True	AATAAA	-18
PB.2275.17	chr11	-	2340	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	42	3205	1	-31	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	25	1830	20.0	3	True	AATGAA	-20
PB.2275.16	chr11	-	2561	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	41	2985	0	189	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	26	1831	40.0	2	True	TTTAAA	-20
PB.2275.15	chr11	-	2847	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	45	2695	0	479	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	22	1827	50.0	6	True	AGTAAA	-16
PB.2275.14	chr11	-	2950	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	39	2598	-2	576	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	28	1833	40.0	0	True	ATTAAA	-10
PB.2275.13	chr11	-	3193	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	39	2355	-2	819	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	28	1833	60.0	0	True	NA	NA
PB.2275.12	chr11	-	3453	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	38	2096	-3	1078	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	29	1834	30.0	-1	True	CATAAA	-22
PB.2275.11	chr11	-	3650	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	40	1897	-1	1277	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	27	1832	20.0	1	True	NA	NA
PB.7590.11	chr22	+	3652	1	novel_in_catalog	CECR7	novel	568	4	NA	NA	10276	8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	102	309	1780	2088	15.0	NA	False	AAAACA	-38
PB.6576.3	chr2	+	4288	14	full-splice_match	SEMA4F	ENST00000357877.6	4312	14	20	4	-4	-4	multi-exon	FALSE	canonical	1	22115	junction_4	21840.745144916807	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	130	2442	35.0	-4	True	AATAAA	-15
PB.6576.2	chr2	+	2907	13	full-splice_match	SEMA4F	ENST00000611975.4	6007	13	9	3091	9	16	multi-exon	FALSE	canonical	1	12951	junction_3	22080.59106810021	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	141	2354	30.0	-116	False	AATACA	-11
PB.10830.18	chr7	+	2621	7	novel_in_catalog	IRF5	novel	2988	9	NA	NA	1	-9	intron_retention	FALSE	canonical	1	69172	junction_1	85833.93745030121	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	776	1630	40.0	-18	True	AATGAA	-5
PB.10830.19	chr7	+	2204	9	novel_not_in_catalog	IRF5	novel	2988	9	NA	NA	91	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	120604.05208412102	NA	3	1	TRUE	NA	NA	NA	C	coding	255	768	876	1643	40.0	-4096	False	AATGAA	-5
PB.6576.6	chr2	+	2769	12	full-splice_match	SEMA4F	ENST00000446927.5	2672	12	-81	-16	1	16	multi-exon	FALSE	canonical	1	6825	junction_3	23125.113204994297	NA	6	2	TRUE	NA	NA	NA	C	coding	382	1149	1068	2216	30.0	1	True	AATACA	-11
PB.2275.19	chr11	-	2032	15	full-splice_match	PPP2R1B	ENST00000527614.5	5587	15	28	3527	-13	-87	multi-exon	FALSE	canonical	1	220369	junction_6	83665.33082566738	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	39	1844	25.0	300	False	NA	NA
PB.2275.18	chr11	-	2205	14	full-splice_match	PPP2R1B	ENST00000341980.10	1953	14	-21	-231	-3	-35	multi-exon	FALSE	canonical	1	12699	junction_6	121390.81302619142	NA	0	NA	TRUE	NA	NA	NA	C	coding	556	1671	29	1699	30.0	-1	True	AATGAA	-16
PB.474.16	chr1	-	2282	10	full-splice_match	ZRANB2	ENST00000370920.7	3078	10	277	519	-9	-473	multi-exon	FALSE	canonical	1	308497	junction_1	299404.42773975944	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	26	1018	50.0	14	True	AATAAA	-14
PB.8645.6	chr4	+	3203	13	full-splice_match	PIGG	ENST00000310340.9	3203	13	1	-1	1	1	multi-exon	FALSE	canonical	1	26706	junction_7	65215.528889896224	NA	1	NA	TRUE	NA	NA	NA	C	coding	975	2928	115	3042	20.0	-18	True	AATAAA	-18
PB.6455.3	chr2	-	4223	5	full-splice_match	MCFD2	ENST00000409973.5	821	5	-8	-3394	-2	-3	multi-exon	FALSE	canonical	1	5474	junction_3	352888.18061320786	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	203	637	30.0	234	False	AATAAA	-13
PB.11861.11	chr9	+	2111	9	incomplete-splice_match	PRRC2B	ENST00000405995.5	9157	31	-28	51656	-28	343	3prime_fragment	FALSE	canonical	1	158940	junction_1	140223.2098998214	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	255	1589	90.0	-41	True	NA	NA
PB.6455.1	chr2	-	4112	4	full-splice_match	MCFD2	ENST00000319466.8	4182	4	74	-4	-3	0	multi-exon	FALSE	canonical	1	627963	junction_1	67199.33959166233	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	85	519	20.0	-27	True	AATAAA	-20
PB.7087.6	chr2	+	1631	8	full-splice_match	COPS8	ENST00000354371.6	4007	8	604	1772	7	76	multi-exon	FALSE	canonical	1	141991	junction_3	124694.74912156405	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	50	679	30.0	2	True	NA	NA
PB.6455.7	chr2	-	3798	5	novel_not_in_catalog	MCFD2	novel	4169	3	NA	NA	-2	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	315159.2502390657	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	109	543	35.0	234	False	AATAAA	-12
PB.6455.6	chr2	-	3784	2	full-splice_match	MCFD2	ENST00000493804.1	807	2	0	-2977	0	-4	multi-exon	FALSE	canonical	1	3400	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	1158	1511	35.0	-22	True	AATAAA	-12
PB.6455.5	chr2	-	3975	3	full-splice_match	MCFD2	ENST00000409913.5	3975	3	-4	4	-4	-4	multi-exon	FALSE	canonical	1	71899	junction_2	278032.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	1349	1702	35.0	232	False	AATAAA	-12
PB.6455.4	chr2	-	4233	4	full-splice_match	MCFD2	ENST00000409207.5	1113	4	-40	-3080	1	-4	multi-exon	FALSE	canonical	1	32780	junction_3	325998.5272710429	NA	0	NA	TRUE	NA	NA	NA	C	coding	146	441	208	648	35.0	0	True	AATAAA	-12
PB.119.6	chr1	+	3392	4	novel_not_in_catalog	SZRD1	novel	490	3	NA	NA	-2	-1	intron_retention	TRUE	non_canonical	0	0	junction_3	609963.1046876706	NA	2	NA	TRUE	NA	NA	NA	C	coding	133	402	33	434	20.0	-11	True	TATAAA	-32
PB.10382.3	chr7	-	3152	5	full-splice_match	FBXL18	ENST00000382368.7	3498	5	-18	364	-18	-340	multi-exon	FALSE	canonical	1	58247	junction_1	58161.44038095601	NA	1	NA	TRUE	NA	NA	NA	C	coding	718	2157	143	2299	35.0	-20	False	ATTAAA	-23
PB.9493.1	chr5	+	788	3	full-splice_match	CYSTM1	ENST00000261811.5	1336	3	546	2	0	-2	multi-exon	FALSE	canonical	1	855362	junction_2	117134.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	97	294	119	412	30.0	0	True	AATAAA	-15
PB.280.1	chr1	+	4181	7	novel_in_catalog	NCDN	novel	3677	7	NA	NA	-21	0	intron_retention	FALSE	canonical	1	24785	junction_1	261123.55788575773	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	934	3072	20.0	-49	True	AATAAA	-13
PB.280.2	chr1	+	3899	8	novel_in_catalog	NCDN	novel	3677	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	24785	junction_2	276611.0677410004	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	652	2790	20.0	-39	True	AATAAA	-13
PB.280.3	chr1	+	3691	8	novel_in_catalog	NCDN	novel	3677	7	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	5339	junction_2	281496.15735558304	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	442	2580	15.0	-30	True	AATAAA	-15
PB.280.4	chr1	+	3431	8	full-splice_match	NCDN	ENST00000356090.8	3433	8	-1	3	-1	3	multi-exon	FALSE	canonical	1	177902	junction_1	231010.29798240244	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	180	2318	10.0	-29	True	AATAAA	-17
PB.4771.1	chr17	-	4499	19	full-splice_match	PIK3R5	ENST00000447110.5	4495	19	-4	0	-4	0	multi-exon	FALSE	canonical	1	54832	junction_18	38807.536305926486	NA	1	NA	TRUE	NA	NA	NA	C	coding	880	2643	135	2777	35.0	-10	True	AATAAA	-17
PB.4771.2	chr17	-	4490	19	novel_not_in_catalog	PIK3R5	novel	4317	18	NA	NA	-15	-1	any annotated donor/acceptor	TRUE	canonical	1	2965	junction_8	48092.13684387372	NA	1	NA	TRUE	NA	NA	NA	C	coding	631	1896	146	2041	35.0	-21	True	AATAAA	-16
PB.4771.3	chr17	-	2164	1	novel_in_catalog	PIK3R5	novel	4495	19	NA	NA	0	-47844	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	109	330	2	331	90.0	-1	True	NA	NA
PB.3231.1	chr13	+	3466	27	full-splice_match	FARP1	ENST00000319562.10	10262	27	61	6735	61	597	multi-exon	FALSE	canonical	1	117487	junction_1	86690.95694668988	NA	0	NA	TRUE	NA	NA	NA	C	coding	1045	3138	205	3342	10.0	3	True	AAAACA	-17
PB.3231.2	chr13	+	3590	28	novel_not_in_catalog	FARP1	novel	4926	28	NA	NA	18	597	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	110168.74232692205	NA	1	1	TRUE	NA	NA	NA	C	coding	1045	3138	329	3466	10.0	0	True	AAAACA	-17
PB.3231.3	chr13	+	2511	17	incomplete-splice_match	FARP1	ENST00000627049.2	5103	28	18	24915	18	-642	3prime_fragment	FALSE	canonical	1	117487	junction_1	80068.46421100742	NA	1	NA	TRUE	NA	NA	NA	C	coding	669	2010	401	2410	40.0	0	True	NA	NA
PB.3231.4	chr13	+	4716	27	full-splice_match	FARP1	ENST00000319562.10	10262	27	132	5414	-33	-8	multi-exon	FALSE	canonical	1	117487	junction_1	86690.95694668988	NA	2	NA	TRUE	NA	NA	NA	C	coding	1045	3138	134	3271	40.0	-34	False	AATAAA	-42
PB.3231.5	chr13	+	4051	13	full-splice_match	FARP1	ENST00000596580.2	13532	13	-114	9595	51	2479	multi-exon	FALSE	canonical	1	117487	junction_1	83871.96854544133	NA	2	NA	TRUE	NA	NA	NA	C	coding	801	2406	215	2620	95.0	-115	False	NA	NA
PB.3231.6	chr13	+	2957	13	incomplete-splice_match	FARP1	ENST00000319562.10	10262	27	267481	5440	6661	-34	5prime_fragment	FALSE	canonical	1	205257	junction_4	87138.23390245461	NA	2	NA	TRUE	NA	NA	NA	C	coding	470	1413	126	1538	30.0	-1183	False	AATAAA	-16
PB.11787.15	chr9	-	3202	8	novel_not_in_catalog	PPP6C	novel	4118	7	NA	NA	6	-2553	any annotated donor/acceptor	FALSE	canonical	1	866	junction_1	420291.25270236406	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	95	781	0.0	102	False	AATAAA	-16
PB.11701.9	chr9	+	6314	8	full-splice_match	FSD1L	ENST00000374707.1	7062	8	-11	759	-11	-759	multi-exon	FALSE	canonical	1	21117	junction_1	18017.593202654083	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	188	1123	20.0	0	True	AATAAA	-33
PB.6220.1	chr19	-	1068	6	full-splice_match	ISOC2	ENST00000425675.6	998	6	-70	0	3	0	multi-exon	FALSE	canonical	1	422733	junction_5	162238.74417092852	NA	1	NA	TRUE	NA	NA	NA	A	coding	205	618	132	749	25.0	2	True	AATAAA	-13
PB.9355.27	chr5	+	4249	28	novel_in_catalog	CAST	novel	864	12	NA	NA	-16	0	intron_retention	FALSE	canonical	1	208086	junction_3	407869.2395717053	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	183	2186	25.0	-33	True	ATTAAA	-18
PB.10399.4	chr7	-	2502	4	novel_in_catalog	ZNF12	novel	4474	5	NA	NA	66	-15	intron_retention	FALSE	canonical	1	2421	junction_3	90768.89282617085	NA	0	NA	TRUE	NA	NA	NA	B	coding	661	1986	133	2118	85.0	476	False	ACTAAA	-31
PB.10399.2	chr7	-	2851	6	novel_not_in_catalog	ZNF12	novel	4474	5	NA	NA	-48	-15	intron_retention	FALSE	non_canonical	0	0	junction_5	72313.39158855709	NA	0	NA	TRUE	NA	NA	NA	B	coding	697	2094	374	2467	85.0	-25	False	ACTAAA	-31
PB.10880.10	chr7	-	3938	15	full-splice_match	HIPK2	ENST00000428878.6	3969	15	25	6	25	-6	multi-exon	FALSE	canonical	1	152185	junction_8	67154.67333552461	NA	1	NA	TRUE	NA	NA	NA	C	coding	1171	3516	131	3646	85.0	-16	True	ATTAAA	-30
PB.8473.3	chr3	+	5010	11	novel_not_in_catalog	MBNL1	novel	1039	3	NA	NA	-13	-3	any annotated donor/acceptor	FALSE	canonical	1	21160	junction_1	392104.5906499948	NA	14	NA	TRUE	NA	NA	NA	C	coding	382	1149	1028	2176	75.0	-9295	False	TTTAAA	-6
PB.11056.7	chr8	+	2088	15	full-splice_match	ELP3	ENST00000256398.12	3452	15	302	1062	0	0	multi-exon	FALSE	canonical	1	226730	junction_1	57242.86602944778	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	76	1719	40.0	-6	True	AATAAA	-22
PB.9708.1	chr6	-	1393	10	full-splice_match	ECI2	ENST00000380118.7	1407	10	0	14	0	-1	multi-exon	FALSE	canonical	1	373696	junction_9	176912.1023936275	NA	0	NA	TRUE	NA	NA	NA	A	coding	392	1179	44	1222	35.0	-1	True	AATAAA	-20
PB.7114.1	chr2	-	1990	6	full-splice_match	THAP4	ENST00000407315.5	2367	6	376	1	376	-1	multi-exon	FALSE	canonical	1	287446	junction_5	191215.5963404659	NA	0	NA	TRUE	NA	NA	NA	A	coding	577	1734	57	1790	20.0	18	True	AATAAA	-37
PB.8397.41	chr3	+	3330	25	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	-14	650	no_combination_of_known_junctions	FALSE	canonical	1	4959	junction_17	288241.70621607517	NA	1	1	TRUE	NA	NA	NA	C	coding	777	2334	355	2688	30.0	-41	True	AGTAAA	-15
PB.4206.3	chr16	-	3026	4	full-splice_match	ZNF597	ENST00000301744.6	5524	4	17	2481	17	-2481	multi-exon	FALSE	canonical	1	23581	junction_1	7933.906029749085	NA	3	NA	TRUE	NA	NA	NA	C	coding	424	1275	231	1505	45.0	-3	True	ATTAAA	-22
PB.2999.3	chr12	-	1214	4	full-splice_match	RILPL2	ENST00000280571.9	6141	4	221	4706	221	-4706	multi-exon	FALSE	canonical	1	452471	junction_3	109960.22157226776	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	77	712	25.0	-21	True	ATTAAA	-23
PB.4206.1	chr16	-	5504	4	full-splice_match	ZNF597	ENST00000301744.6	5524	4	25	-5	25	5	multi-exon	FALSE	canonical	1	23581	junction_1	7933.906029749085	NA	7	NA	TRUE	NA	NA	NA	C	coding	424	1275	223	1497	40.0	5	True	ATTAAA	-20
PB.2999.1	chr12	-	3000	4	full-splice_match	RILPL2	ENST00000280571.9	6141	4	235	2906	235	-2906	multi-exon	FALSE	canonical	1	452471	junction_3	109960.22157226776	NA	1	NA	TRUE	NA	NA	NA	C	coding	211	636	63	698	15.0	-7	True	NA	NA
PB.5091.2	chr17	-	4168	4	full-splice_match	GNGT2	ENST00000507680.5	585	4	-37	-3546	-37	-308	multi-exon	FALSE	canonical	1	31473	junction_3	45322.877154430025	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-19	False	NA	NA
PB.5091.3	chr17	-	1039	4	novel_not_in_catalog	GNGT2	novel	522	4	NA	NA	0	-6	any annotated donor/acceptor	FALSE	canonical	1	14696	junction_3	51938.23047300193	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-1	True	NA	NA
PB.11341.2	chr8	+	5147	1	novel_in_catalog	PVT1	novel	1535	3	NA	NA	18244	-18435	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	202	609	578	1186	100.0	-7387	False	NA	NA
PB.5091.1	chr17	-	4205	4	novel_not_in_catalog	GNGT2	novel	522	4	NA	NA	-29	-307	any annotated donor/acceptor	FALSE	canonical	1	14696	junction_3	51938.23047300193	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-11	True	NA	NA
PB.4793.1	chr17	-	4285	6	full-splice_match	ZNF287	ENST00000395825.3	3208	6	-7	-1070	-7	1070	multi-exon	FALSE	canonical	1	26377	junction_5	25223.586398448573	NA	2	NA	TRUE	NA	NA	NA	C	coding	761	2286	461	2746	55.0	-10	True	AATAAA	-32
PB.4793.2	chr17	-	1510	6	full-splice_match	ZNF287	ENST00000395825.3	3208	6	-10	1708	-10	15	multi-exon	FALSE	canonical	1	26377	junction_5	25223.586398448573	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1047	464	1510	30.0	-13	True	AATAAA	-34
PB.4793.3	chr17	-	2532	5	incomplete-splice_match	ZNF287	ENST00000395825.3	3208	6	-10	1708	-10	15	intron_retention	FALSE	canonical	1	73708	junction_1	11229.726429771119	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1026	1507	2532	30.0	-13	True	AATAAA	-34
PB.508.1	chr1	+	2299	1	antisense	novelGene_BCL10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.8877.11	chr4	+	3348	21	novel_in_catalog	HERC5	novel	3513	23	NA	NA	2	-23	no_combination_of_known_junctions	FALSE	canonical	1	2505	junction_18	61093.14782238266	NA	1	NA	TRUE	NA	NA	NA	C	coding	978	2937	152	3088	75.0	0	True	NA	NA
PB.8877.10	chr4	+	3375	22	novel_in_catalog	HERC5	novel	3513	23	NA	NA	2	-23	no_combination_of_known_junctions	FALSE	canonical	1	582	junction_14	64796.56187990056	NA	0	NA	TRUE	NA	NA	NA	C	coding	987	2964	152	3115	75.0	0	True	NA	NA
PB.8877.13	chr4	+	3423	22	novel_in_catalog	HERC5	novel	3513	23	NA	NA	4	-24	no_combination_of_known_junctions	FALSE	canonical	1	1602	junction_9	64650.70485374593	NA	1	NA	TRUE	NA	NA	NA	C	coding	1004	3015	150	3164	70.0	2	True	NA	NA
PB.12254.26	chrX	+	5745	33	novel_in_catalog	STAG2	novel	385	4	NA	NA	25	-156	combination_of_known_junctions	FALSE	canonical	1	30352	junction_1	181059.26063491777	NA	0	NA	TRUE	NA	NA	NA	C	coding	1231	3696	147	3842	10.0	0	True	AATAAA	-17
PB.8877.15	chr4	+	2072	15	incomplete-splice_match	HERC5	ENST00000264350.7	3513	23	33	18994	33	-18783	3prime_fragment	FALSE	canonical	1	69315	junction_1	39588.4569009834	NA	0	NA	TRUE	NA	NA	NA	C	coding	650	1950	121	2070	45.0	31	True	ATTAAA	-24
PB.8877.14	chr4	+	2772	20	novel_in_catalog	HERC5	novel	3513	23	NA	NA	4	-1376	no_combination_of_known_junctions	FALSE	canonical	1	4929	junction_13	67012.31403641599	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2622	150	2771	60.0	2	True	NA	NA
PB.7059.2	chr2	+	2028	6	full-splice_match	ITM2C	ENST00000326427.10	2078	6	50	0	2	0	multi-exon	TRUE	canonical	1	1306122	junction_1	581032.3135308053	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	77	880	15.0	2	True	AATAAA	-16
PB.11861.10	chr9	+	7090	30	novel_in_catalog	PRRC2B	novel	266	2	NA	NA	-4	-1960	combination_of_known_junctions	FALSE	canonical	1	82105	junction_15	177117.31438199544	NA	1	NA	TRUE	NA	NA	NA	C	coding	1476	4431	231	4661	85.0	-17	True	NA	NA
PB.5085.1	chr17	-	3624	2	full-splice_match	HOXB13	ENST00000290295.7	3467	2	424	-581	424	581	multi-exon	FALSE	canonical	1	472170	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	284	855	162	1016	25.0	-5	True	TTTAAA	-23
PB.5085.3	chr17	-	3009	2	full-splice_match	HOXB13	ENST00000290295.7	3467	2	450	8	450	-8	multi-exon	FALSE	canonical	1	472170	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	136	990	50.0	0	True	AATAAA	-9
PB.5085.2	chr17	-	2934	3	novel_not_in_catalog	HOXB13	novel	3467	2	NA	NA	453	-8	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	236085.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	133	987	50.0	3	True	AATAAA	-9
PB.5085.4	chr17	-	1757	2	full-splice_match	HOXB13	ENST00000290295.7	3467	2	108	1602	108	-1602	multi-exon	FALSE	canonical	1	472170	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	478	1332	20.0	-3	True	NA	NA
PB.7015.1	chr2	+	1542	1	genic	CYP27A1	novel	NA	NA	NA	NA	-33	-29768	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	104	315	468	782	95.0	-461	False	NA	NA
PB.7015.2	chr2	+	1836	10	novel_not_in_catalog	CYP27A1	novel	2566	7	NA	NA	-20	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	141720.6215929473	NA	0	NA	TRUE	NA	NA	NA	C	coding	437	1314	261	1574	15.0	-4	True	AATAAA	-22
PB.7015.3	chr2	+	1890	9	full-splice_match	CYP27A1	ENST00000258415.8	2286	9	395	1	-2	-1	multi-exon	FALSE	canonical	1	251008	junction_1	73980.41843918903	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	33	1628	15.0	4	True	AATAAA	-22
PB.11435.3	chr9	+	3369	7	full-splice_match	CDC37L1	ENST00000381854.3	3502	7	131	2	-18	-2	multi-exon	FALSE	canonical	1	169991	junction_5	36229.74162204307	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	72	1085	30.0	0	True	AATAAA	-15
PB.9570.12	chr5	-	2719	18	full-splice_match	TNIP1	ENST00000523338.5	2711	18	-6	-2	2	0	multi-exon	FALSE	canonical	1	126791	junction_1	550636.0762302342	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1908	117	2024	30.0	-5	True	CATAAA	-19
PB.9570.13	chr5	-	2715	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	12384	junction_13	579635.5003602345	NA	1	NA	TRUE	NA	NA	NA	C	coding	610	1833	117	1949	30.0	-5	True	CATAAA	-19
PB.9570.10	chr5	-	2810	18	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	58177	junction_2	549463.8503243687	NA	3	NA	TRUE	NA	NA	NA	C	coding	619	1860	117	1976	30.0	-5	True	CATAAA	-19
PB.9570.11	chr5	-	3111	18	full-splice_match	TNIP1	ENST00000518977.5	2200	18	-286	-625	-276	5	multi-exon	FALSE	canonical	1	126791	junction_1	524446.5975820852	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	518	2425	45.0	32	True	CATAAA	-10
PB.9570.17	chr5	-	2668	17	full-splice_match	TNIP1	ENST00000610535.5	2682	17	28	-14	8	0	multi-exon	FALSE	canonical	1	18660	junction_2	543393.1722869349	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	184	1902	30.0	-21	True	CATAAA	-19
PB.9130.1	chr5	+	3632	2	antisense	novelGene_AC010451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4449	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ATTAAA	-33
PB.9570.15	chr5	-	2716	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	58177	junction_2	563278.62736826	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	182	1882	30.0	-32	True	CATAAA	-19
PB.8461.28	chr3	-	3293	6	full-splice_match	WWTR1	ENST00000472417.1	955	6	29	-2367	29	-1239	multi-exon	FALSE	canonical	1	2246	junction_5	207533.96246340018	NA	0	NA	TRUE	NA	NA	NA	C	coding	242	729	234	962	80.0	-2	True	AAAAAG	-18
PB.6071.1	chr19	+	2585	20	novel_in_catalog	CLASRP	novel	2234	21	NA	NA	3	0	intron_retention	TRUE	canonical	1	173847	junction_12	139565.757954654	NA	0	NA	TRUE	NA	NA	NA	C	coding	669	2010	86	2095	15.0	-3	True	AATAAA	-25
PB.9570.19	chr5	-	2547	17	novel_in_catalog	TNIP1	novel	2680	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	64815	junction_16	569055.6471875651	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	104	1852	30.0	-5	True	CATAAA	-19
PB.628.9	chr1	-	1875	7	full-splice_match	AP4B1	ENST00000369567.5	2144	7	-43	312	-27	0	multi-exon	FALSE	canonical	1	5000	junction_6	83489.95224376803	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	155	1870	10.0	-73	True	AATAAA	-13
PB.8875.12	chr4	+	3783	22	incomplete-splice_match	HERC6	ENST00000264346.11	3779	23	4081	15	3880	0	5prime_fragment	FALSE	canonical	1	75268	junction_1	23795.944276855476	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	445	3147	25.0	1	True	NA	NA
PB.8875.11	chr4	+	2984	13	novel_not_in_catalog	HERC6	novel	3473	20	NA	NA	-21	11756	any annotated donor/acceptor	FALSE	canonical	1	268	junction_12	30952.729246474464	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	246	1493	25.0	21	True	NA	NA
PB.8875.10	chr4	+	3484	22	full-splice_match	HERC6	ENST00000380265.9	3781	22	296	1	-29	0	multi-exon	FALSE	canonical	1	2534	junction_14	33774.88576340512	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	254	2848	25.0	13	True	NA	NA
PB.4230.4	chr16	-	2286	8	novel_in_catalog	EEF2KMT	novel	2268	7	NA	NA	1	1	intron_retention	FALSE	canonical	1	29413	junction_7	41316.953450226254	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	679	1371	10.0	41	False	AATAAA	-19
PB.4230.5	chr16	-	1932	8	full-splice_match	EEF2KMT	ENST00000427587.8	2390	8	34	424	0	-10	multi-exon	FALSE	canonical	1	86054	junction_5	27812.103479585712	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	36	1028	10.0	20	False	AATAAA	-8
PB.4230.6	chr16	-	1270	8	full-splice_match	EEF2KMT	ENST00000427587.8	2390	8	61	1059	-5	0	multi-exon	FALSE	canonical	1	86054	junction_5	27812.103479585712	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	9	1001	50.0	47	False	NA	NA
PB.4230.1	chr16	-	2386	8	full-splice_match	EEF2KMT	ENST00000427587.8	2390	8	13	-9	-7	9	multi-exon	FALSE	canonical	1	86054	junction_5	27812.103479585712	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	57	1049	30.0	-1	True	NA	NA
PB.4230.2	chr16	-	2704	8	novel_in_catalog	EEF2KMT	novel	2268	7	NA	NA	0	4	intron_retention	FALSE	canonical	1	29413	junction_7	41316.953450226254	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	680	1372	30.0	40	False	NA	NA
PB.4230.3	chr16	-	2291	7	novel_in_catalog	EEF2KMT	novel	2268	7	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	1	7605	junction_5	51043.898445085695	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	57	968	40.0	-1	True	NA	NA
PB.6880.12	chr2	+	3333	10	full-splice_match	ITGA4	ENST00000465522.5	1721	10	-35	-1577	-35	1577	multi-exon	FALSE	canonical	1	236407	junction_5	78385.98323270574	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	347	1447	20.0	-17	True	AATAAA	-18
PB.6880.15	chr2	+	3063	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	539	587	51	-587	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	528	2990	50.0	-9694	False	AGTAAA	-24
PB.7108.1	chr2	+	1304	10	full-splice_match	PPP1R7	ENST00000234038.10	2386	10	454	628	-4	0	multi-exon	FALSE	canonical	1	580703	junction_1	284155.5222217858	NA	0	NA	TRUE	NA	NA	NA	A	coding	360	1083	21	1103	15.0	-7	True	ATTAAA	-16
PB.6880.14	chr2	+	4844	27	novel_in_catalog	ITGA4	novel	1846	2	NA	NA	-29	935	combination_of_known_junctions	FALSE	canonical	1	14117	junction_3	112454.03368664875	NA	25	NA	TRUE	NA	NA	NA	C	coding	820	2463	787	3249	35.0	-11	True	AATAAA	-22
PB.6880.17	chr2	+	6374	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	303	-2488	100	2488	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	3	NA	TRUE	NA	NA	NA	C	coding	1012	3039	188	3226	55.0	0	True	NA	NA
PB.6741.2	chr2	-	2846	6	full-splice_match	FAR2P2	ENST00000433703.5	603	6	-767	-1476	-366	-2	multi-exon	FALSE	canonical	1	80	junction_4	12501.991895694062	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-11
PB.6400.1	chr2	-	687	5	full-splice_match	DPY30	ENST00000342166.9	708	5	7	14	0	-14	multi-exon	FALSE	canonical	1	1078516	junction_4	127592.67957914945	NA	0	NA	TRUE	NA	NA	NA	A	coding	99	300	110	409	30.0	-13	True	AATAAA	-14
PB.3259.1	chr13	-	1558	2	full-splice_match	RAB20	ENST00000267328.4	1518	2	-37	-3	-37	3	multi-exon	FALSE	canonical	1	134697	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	234	705	252	956	30.0	-49	False	ATTAAA	-25
PB.6072.2	chr19	+	1020	3	full-splice_match	GEMIN7	ENST00000270257.8	1657	3	24	613	17	42	multi-exon	FALSE	canonical	1	123348	junction_1	58690.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	224	619	30.0	26	True	NA	NA
PB.2921.19	chr12	+	2783	1	novel_in_catalog	OAS2	novel	3613	11	NA	NA	7420	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	100	303	131	433	20.0	7442	False	NA	NA
PB.2921.18	chr12	+	5425	2	full-splice_match	OAS2	ENST00000449768.2	2072	2	230	-3583	110	3583	multi-exon	FALSE	canonical	1	355551	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	6	416	90.0	132	False	NA	NA
PB.2921.17	chr12	+	4321	9	novel_in_catalog	OAS2	novel	3613	11	NA	NA	8	-1	intron_retention	FALSE	canonical	1	2259	junction_1	132372.7178384485	NA	1	NA	TRUE	NA	NA	NA	C	coding	422	1269	586	1854	20.0	-1	True	NA	NA
PB.2921.16	chr12	+	3013	2	novel_not_in_catalog	OAS2	novel	3613	11	NA	NA	3	-2	any annotated donor/acceptor	FALSE	canonical	1	2239	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	67	462	20.0	-6	True	NA	NA
PB.2921.15	chr12	+	4215	8	novel_in_catalog	OAS2	novel	3613	11	NA	NA	1	1	intron_retention	FALSE	canonical	1	323	junction_3	121420.32615367703	NA	1	NA	TRUE	NA	NA	NA	C	coding	560	1683	69	1751	20.0	-8	True	NA	NA
PB.2921.14	chr12	+	5080	10	novel_not_in_catalog	OAS2	novel	3613	11	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	6272	junction_6	122156.69556893305	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	91	1461	20.0	0	True	NA	NA
PB.2921.13	chr12	+	2954	10	full-splice_match	OAS2	ENST00000392583.6	4734	10	166	1614	-22	-1112	multi-exon	FALSE	canonical	1	261282	junction_3	61403.28317397377	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	42	2105	15.0	-12	True	NA	NA
PB.2921.12	chr12	+	3468	10	novel_not_in_catalog	OAS2	novel	3613	11	NA	NA	-28	-1113	any annotated donor/acceptor	FALSE	canonical	1	6272	junction_6	122156.69556893305	NA	1	NA	TRUE	NA	NA	NA	C	coding	456	1371	98	1468	10.0	-7	True	NA	NA
PB.2921.11	chr12	+	3196	10	full-splice_match	OAS2	ENST00000392583.6	4734	10	97	1441	17	-939	multi-exon	FALSE	canonical	1	261282	junction_3	61403.28317397377	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	111	2174	20.0	-81	False	AATAAA	-35
PB.2921.10	chr12	+	5179	9	novel_in_catalog	OAS2	novel	3613	11	NA	NA	-14	1	intron_retention	FALSE	canonical	1	261282	junction_3	48495.55072230209	NA	2	NA	TRUE	NA	NA	NA	C	coding	391	1176	142	1317	20.0	-2	True	NA	NA
PB.7955.19	chr3	-	2068	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	29	495	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159351.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	15	True	AATAAA	-24
PB.7955.18	chr3	-	2362	2	full-splice_match	FGD5-AS1	ENST00000424349.1	3792	2	-15	1445	-15	451	multi-exon	FALSE	canonical	1	318703	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	901	False	NA	NA
PB.7955.15	chr3	-	3049	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	14	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	159351.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-13
PB.10900.1	chr7	-	2401	2	full-splice_match	ARHGEF35	ENST00000378115.2	2431	2	28	2	28	-2	multi-exon	FALSE	canonical	1	24771	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	484	1455	103	1557	45.0	NA	False	AATAAA	-20
PB.7955.17	chr3	-	2942	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	-141	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	46994.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	389	False	AATAAA	-13
PB.7955.16	chr3	-	3029	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43756.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-7	True	AATAAA	-13
PB.7955.11	chr3	-	3438	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	159351.5	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-13
PB.7955.10	chr3	-	3484	2	full-splice_match	FGD5-AS1	ENST00000426200.1	1874	2	298	-1908	-233	-1	multi-exon	FALSE	canonical	1	93989	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	21	True	AATAAA	-13
PB.7955.13	chr3	-	3422	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	46	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	43756.0	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	32	True	AATAAA	-13
PB.7955.12	chr3	-	3411	3	novel_not_in_catalog	FGD5-AS1	novel	1184	6	NA	NA	14	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	43756.0	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-13
PB.7081.7	chr2	-	2418	9	full-splice_match	HJURP	ENST00000411486.6	3187	9	33	736	2	-736	multi-exon	FALSE	canonical	1	214363	junction_4	56596.475716249326	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	55	2280	30.0	1	True	AGTAAA	-23
PB.7081.6	chr2	-	5188	8	novel_in_catalog	HJURP	novel	823	3	NA	NA	0	-673	intron_retention	FALSE	canonical	1	214363	junction_4	59721.387634411105	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	2990	4987	15.0	-1	True	AATAAA	-21
PB.7081.5	chr2	-	5171	7	novel_in_catalog	HJURP	novel	823	3	NA	NA	-5	-661	intron_retention	FALSE	canonical	1	11876	junction_4	118986.51438491768	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	3048	4958	15.0	2	True	AATAAA	-33
PB.6295.6	chr2	-	3514	1	novel_in_catalog	CMPK2	novel	1224	4	NA	NA	3	-922	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	212	639	76	714	70.0	-30	True	NA	NA
PB.7081.2	chr2	-	3038	9	full-splice_match	HJURP	ENST00000411486.6	3187	9	31	118	0	-118	multi-exon	FALSE	canonical	1	214363	junction_4	56596.475716249326	NA	1	1	TRUE	NA	NA	NA	C	coding	741	2226	57	2282	25.0	-1	True	NA	NA
PB.7081.1	chr2	-	3175	9	full-splice_match	HJURP	ENST00000411486.6	3187	9	13	-1	13	-1	multi-exon	FALSE	canonical	1	214363	junction_4	56596.475716249326	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	75	2300	10.0	-19	True	AGTAAA	-18
PB.8827.29	chr4	-	3963	12	full-splice_match	G3BP2	ENST00000359707.8	4883	12	556	364	-12	-364	multi-exon	FALSE	canonical	1	173938	junction_4	492708.8761422128	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	231	1679	30.0	-3	True	AATAAA	-15
PB.6048.1	chr19	+	2855	5	full-splice_match	ZNF221	ENST00000587682.5	2034	5	-82	-739	-82	386	multi-exon	FALSE	canonical	1	19771	junction_1	5582.830845547804	NA	2	NA	TRUE	NA	NA	NA	A	coding	617	1854	263	2116	25.0	-87	False	ATTAAA	-27
PB.7081.9	chr2	-	2226	7	novel_not_in_catalog	HJURP	novel	823	3	NA	NA	0	-675	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	120158.42563523747	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	57	2027	15.0	-1	True	AATAAA	-19
PB.8692.1	chr4	+	2534	2	full-splice_match	AFAP1-AS1	ENST00000608442.1	6795	2	-13	4274	-13	-4274	multi-exon	FALSE	canonical	1	16610	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	100	303	731	1033	25.0	0	True	AATAAA	-20
PB.7942.9	chr3	+	3841	8	full-splice_match	MKRN2	ENST00000170447.11	2848	8	73	-1066	0	1066	multi-exon	FALSE	canonical	1	304141	junction_2	43781.086854056615	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	65	1315	25.0	0	True	TATAAA	-19
PB.7942.8	chr3	+	2453	8	full-splice_match	MKRN2	ENST00000170447.11	2848	8	63	332	-10	-332	multi-exon	FALSE	canonical	1	304141	junction_2	43781.086854056615	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	75	1325	30.0	-10	True	AATAAA	-31
PB.7942.1	chr3	+	2637	7	full-splice_match	MKRN2	ENST00000411987.5	1436	7	-28	-1173	-28	-37	multi-exon	FALSE	canonical	1	14598	junction_1	146923.46687041598	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	93	1214	75.0	1	True	NA	NA
PB.7942.3	chr3	+	2343	7	full-splice_match	MKRN2	ENST00000411987.5	1436	7	-29	-878	-29	-332	multi-exon	FALSE	canonical	1	14598	junction_1	146923.46687041598	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	94	1215	30.0	0	True	AATAAA	-31
PB.7942.2	chr3	+	1767	8	full-splice_match	MKRN2	ENST00000170447.11	2848	8	42	1039	-31	48	multi-exon	FALSE	canonical	1	304141	junction_2	43781.086854056615	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	96	1346	20.0	-2	True	TATAAA	-13
PB.7942.5	chr3	+	2738	8	full-splice_match	MKRN2	ENST00000170447.11	2848	8	73	37	0	-37	multi-exon	FALSE	canonical	1	304141	junction_2	43781.086854056615	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	65	1315	75.0	0	True	NA	NA
PB.7942.4	chr3	+	3412	1	novel_in_catalog	MKRN2	novel	2848	8	NA	NA	-20	-22025	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-20	True	NA	NA
PB.7942.7	chr3	+	2178	8	full-splice_match	MKRN2	ENST00000170447.11	2848	8	59	611	-14	476	multi-exon	FALSE	canonical	1	304141	junction_2	43781.086854056615	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	79	1329	30.0	-14	True	AATATA	-24
PB.7942.6	chr3	+	2841	9	novel_not_in_catalog	MKRN2	novel	2848	8	NA	NA	-16	-7	any annotated donor/acceptor	FALSE	canonical	1	5692	junction_2	168802.77366088916	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	81	1388	35.0	-16	True	AATAAA	-25
PB.6674.2	chr2	-	1455	7	full-splice_match	FHL2	ENST00000322142.12	1462	7	7	0	-3	0	multi-exon	FALSE	canonical	1	94810	junction_6	366747.41875968105	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	161	1000	30.0	-4	True	AATAAA	-15
PB.9443.3	chr5	-	1814	10	full-splice_match	SEPT8	ENST00000378719.6	2889	10	125	950	-2	-308	multi-exon	FALSE	canonical	1	114237	junction_1	276070.3173391308	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	114	1565	70.0	-12	True	NA	NA
PB.6674.1	chr2	-	1551	7	full-splice_match	FHL2	ENST00000344213.8	1769	7	202	16	28	0	multi-exon	TRUE	canonical	1	146992	junction_6	352682.30907133536	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	257	1096	30.0	-1	True	AATAAA	-15
PB.12248.18	chrX	-	3620	21	full-splice_match	CUL4B	ENST00000336592.10	3109	21	-74	-437	-74	437	multi-exon	FALSE	non_canonical	0	0	junction_17	157405.57900909198	NA	1	NA	TRUE	NA	NA	NA	C	coding	900	2703	116	2818	70.0	111	False	NA	NA
PB.5651.10	chr19	-	1744	5	novel_not_in_catalog	TUBB4A	novel	2552	4	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	242530.09220133384	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	98	1432	15.0	-1	True	AATAAA	-19
PB.9443.2	chr5	-	2868	10	full-splice_match	SEPT8	ENST00000378719.6	2889	10	12	9	12	-9	multi-exon	FALSE	canonical	1	114237	junction_1	276070.3173391308	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	227	1678	30.0	-2	True	AATAAA	-32
PB.12248.15	chrX	-	5336	20	novel_in_catalog	CUL4B	novel	4902	20	NA	NA	-1	-11	intron_retention	FALSE	non_canonical	0	0	junction_16	160750.02432029386	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	43	1944	55.0	11	True	AATAAA	-10
PB.8738.7	chr4	+	4036	15	novel_not_in_catalog	FAM114A1	novel	567	3	NA	NA	-12	6	any annotated donor/acceptor	FALSE	canonical	1	115	junction_12	133956.67824987223	NA	2	NA	TRUE	NA	NA	NA	C	coding	602	1809	40	1848	30.0	-2	True	ATTAAA	-21
PB.9443.1	chr5	-	3092	9	novel_in_catalog	SEPT8	novel	2889	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	114237	junction_1	285551.9591820156	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	958	1896	20.0	-12	True	AATAAA	-38
PB.12248.12	chrX	-	4868	19	novel_in_catalog	CUL4B	novel	4902	20	NA	NA	20	-11	intron_retention	FALSE	non_canonical	0	0	junction_16	171387.58415935034	NA	2	NA	TRUE	NA	NA	NA	C	coding	450	1353	124	1476	55.0	-26	True	AATAAA	-10
PB.5747.4	chr19	-	2517	4	full-splice_match	ZNF564	ENST00000339282.11	2935	4	61	357	-1	-357	multi-exon	FALSE	canonical	1	46902	junction_3	21976.823534502586	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	137	1798	35.0	13	True	NA	NA
PB.6195.1	chr19	-	4229	5	full-splice_match	ZNF347	ENST00000334197.11	7960	5	-39	3770	5	-2	multi-exon	FALSE	canonical	1	9665	junction_4	11306.74706480604	NA	5	NA	TRUE	NA	NA	NA	C	coding	839	2520	109	2628	35.0	-18	False	AATACA	-17
PB.5747.1	chr19	-	3391	4	full-splice_match	ZNF564	ENST00000339282.11	2935	4	11	-467	11	467	multi-exon	FALSE	canonical	1	46902	junction_3	21976.823534502586	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	187	1848	45.0	-10	False	NA	NA
PB.5747.2	chr19	-	3207	4	full-splice_match	ZNF564	ENST00000339282.11	2935	4	46	-318	-16	318	multi-exon	FALSE	canonical	1	46902	junction_3	21976.823534502586	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	152	1813	85.0	-2	True	NA	NA
PB.5747.3	chr19	-	2887	4	full-splice_match	ZNF564	ENST00000339282.11	2935	4	47	1	-15	-1	multi-exon	FALSE	canonical	1	46902	junction_3	21976.823534502586	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	151	1812	20.0	-1	True	NA	NA
PB.5852.1	chr19	+	1840	13	full-splice_match	DDX49	ENST00000247003.8	1830	13	-8	-2	-8	2	multi-exon	TRUE	canonical	1	398992	junction_1	126077.31738398885	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	76	1527	30.0	-48	False	AATAAA	-20
PB.5852.2	chr19	+	1878	14	full-splice_match	DDX49	ENST00000629999.2	1912	14	30	4	-10	2	multi-exon	FALSE	canonical	1	25921	junction_3	237277.18515486852	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	564	1565	30.0	-10	True	AATAAA	-20
PB.11845.1	chr9	-	1753	3	full-splice_match	PTGES	ENST00000340607.4	1774	3	1	20	1	-20	multi-exon	FALSE	canonical	1	266407	junction_2	47444.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	152	459	35	493	15.0	-5	True	ATTAAA	-14
PB.6071.4	chr19	+	2642	19	novel_in_catalog	CLASRP	novel	2234	21	NA	NA	-2	0	intron_retention	FALSE	canonical	1	173847	junction_12	143376.93289688084	NA	2	NA	TRUE	NA	NA	NA	C	coding	669	2010	67	2076	15.0	16	True	AATAAA	-24
PB.8271.4	chr3	+	2185	4	novel_in_catalog	PCNP	novel	2342	5	NA	NA	-11	-2	no_combination_of_known_junctions	FALSE	canonical	1	28134	junction_2	332841.8147118338	NA	0	NA	TRUE	NA	NA	NA	C	coding	153	462	42	503	25.0	-5	True	AATAAA	-13
PB.6426.14	chr2	-	1903	15	novel_not_in_catalog	HNRNPLL	novel	4173	13	NA	NA	-6	-60	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	205720.47164082245	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	106	1878	15.0	324	False	ATTAAA	-25
PB.141.1	chr1	+	6521	8	full-splice_match	OTUD3	ENST00000375120.3	6397	8	-133	9	-133	-9	multi-exon	FALSE	canonical	1	34358	junction_1	16495.65487994846	NA	2	NA	TRUE	NA	NA	NA	A	coding	398	1197	135	1331	50.0	-20	True	AATAAA	-10
PB.7453.1	chr21	+	4821	3	intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-13
PB.1025.2	chr1	-	3531	2	full-splice_match	ZNF281	ENST00000367353.1	3080	2	-45	-406	2	406	multi-exon	FALSE	canonical	1	46438	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	128	2815	80.0	3	True	NA	NA
PB.7095.2	chr2	+	2437	5	full-splice_match	ASB1	ENST00000264607.8	6994	5	103	4454	-77	1145	multi-exon	FALSE	canonical	1	105437	junction_1	44474.58231043322	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	145	1152	35.0	0	True	NA	NA
PB.8219.4	chr3	-	4490	19	novel_not_in_catalog	EOGT	novel	4731	18	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	canonical	1	8298	junction_9	49222.48150533667	NA	2	1	TRUE	NA	NA	NA	C	coding	544	1635	466	2100	40.0	-23	True	AATAAA	-19
PB.7843.8	chr22	-	3275	11	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	13582	-1	any annotated donor/acceptor	FALSE	canonical	1	1284	junction_10	240606.34155817673	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	230	1690	20.0	1325	False	AATAAA	-18
PB.147.2	chr1	-	5072	19	full-splice_match	ECE1	ENST00000374893.10	2484	19	21	-2609	-4	-3	multi-exon	FALSE	canonical	1	122202	junction_18	202534.77997477888	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	55	2367	5.0	-11	True	AATAAA	-15
PB.9355.21	chr5	+	2726	31	full-splice_match	CAST	ENST00000508608.5	2425	31	-67	-234	-14	34	multi-exon	FALSE	canonical	1	137170	junction_1	387569.27916401677	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	152	2416	75.0	-14	True	GATAAA	-19
PB.11881.12	chr9	-	2060	6	full-splice_match	SURF4	ENST00000371989.7	2984	6	39	885	-17	534	multi-exon	FALSE	canonical	1	1350008	junction_5	313106.1478080557	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	92	901	10.0	-1	True	TTTAAA	-18
PB.9443.8	chr5	-	3333	5	novel_not_in_catalog	SEPT8	novel	2889	10	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	380415.56594367954	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	74	517	5.0	2869	False	ATTAAA	-17
PB.6276.1	chr19	+	3102	4	full-splice_match	ZNF324	ENST00000196482.3	3000	4	-86	-16	-35	0	multi-exon	FALSE	canonical	1	32908	junction_1	19382.64353028818	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	31	1842	85.0	-9417	False	NA	NA
PB.6276.2	chr19	+	3228	4	full-splice_match	ZNF324	ENST00000196482.3	3000	4	-53	-175	-2	159	multi-exon	FALSE	canonical	1	32908	junction_1	19382.64353028818	NA	1	NA	TRUE	NA	NA	NA	C	coding	553	1662	148	1809	35.0	-9384	False	GATAAA	-12
PB.625.16	chr1	-	2356	13	incomplete-splice_match	PHTF1	ENST00000369604.5	3273	19	-77	8561	-64	-1	3prime_fragment	FALSE	canonical	1	64421	junction_12	44187.09822157431	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	562	2289	20.0	-68	False	AATAAA	-15
PB.9269.20	chr5	+	3370	18	novel_not_in_catalog	RAD17	novel	464	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	523	junction_4	58504.935831522096	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	1346	2863	10.0	2	True	ATTAAA	-12
PB.9269.21	chr5	+	3264	18	novel_in_catalog	RAD17	novel	464	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	624	junction_1	65633.61943463095	NA	2	NA	TRUE	NA	NA	NA	C	coding	670	2013	745	2757	10.0	2	True	ATTAAA	-12
PB.9269.22	chr5	+	3237	17	novel_in_catalog	RAD17	novel	464	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	2322	junction_16	64366.5214764972	NA	19	1	TRUE	NA	NA	NA	C	coding	565	1698	776	2473	10.0	4	True	ATTAAA	-12
PB.9269.23	chr5	+	2976	18	full-splice_match	RAD17	ENST00000616683.4	3057	18	-238	319	1	-13	multi-exon	FALSE	canonical	1	33272	junction_10	55502.58705127251	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	776	2788	25.0	4	True	AGTAAA	-18
PB.625.15	chr1	-	2444	13	incomplete-splice_match	PHTF1	ENST00000357783.6	2747	15	-50	1943	-37	-1	3prime_fragment	FALSE	canonical	1	20637	junction_12	53976.35746240868	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	650	2377	20.0	-41	True	AATAAA	-15
PB.8873.1	chr4	-	2638	16	novel_in_catalog	ABCG2	novel	4276	16	NA	NA	237	-1413	combination_of_known_junctions	FALSE	canonical	1	19888	junction_15	25712.8283671789	NA	0	NA	TRUE	NA	NA	NA	B	coding	655	1968	119	2086	25.0	-5	True	ATTAAA	-20
PB.11714.1	chr9	+	2694	1	intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	coding	66	201	157	357	15.0	-425	False	AAGAAA	-38
PB.8271.6	chr3	+	7765	4	novel_in_catalog	PCNP	novel	2342	5	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	221699	junction_1	79526.08434693335	NA	9	NA	TRUE	NA	NA	NA	C	coding	147	444	37	480	25.0	0	True	AATAAA	-13
PB.625.12	chr1	-	3148	16	incomplete-splice_match	PHTF1	ENST00000369604.5	3273	19	-92	3063	-79	-393	3prime_fragment	FALSE	canonical	1	64421	junction_15	43489.13067555565	NA	1	NA	TRUE	NA	NA	NA	C	coding	691	2076	577	2652	0.0	-83	False	AATAAA	-15
PB.12041.2	chrX	+	2131	2	full-splice_match	CHST7	ENST00000276055.3	2289	2	-70	228	-70	-228	multi-exon	FALSE	canonical	1	78603	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	219	1679	40.0	0	True	ATTAAA	-19
PB.12041.3	chrX	+	1831	2	full-splice_match	CHST7	ENST00000276055.3	2289	2	457	1	457	-1	multi-exon	FALSE	canonical	1	78603	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	91	1152	15.0	-4054	False	ATTAAA	-28
PB.12041.1	chrX	+	3899	2	full-splice_match	CHST7	ENST00000276055.3	2289	2	-70	-1540	-70	1540	multi-exon	FALSE	canonical	1	78603	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	219	1679	20.0	0	True	ATTAAA	-15
PB.11677.2	chr9	+	1159	7	full-splice_match	ANP32B	ENST00000339399.4	1463	7	-137	441	-137	-441	multi-exon	FALSE	canonical	1	437396	junction_2	1629166.9491067103	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	333	1088	75.0	-1146	False	NA	NA
PB.11677.3	chr9	+	1360	7	full-splice_match	ANP32B	ENST00000339399.4	1463	7	-19	122	-19	-122	multi-exon	FALSE	canonical	1	437396	junction_2	1629166.9491067103	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	215	970	10.0	1	True	AATAAA	-23
PB.4307.1	chr16	+	2277	13	novel_in_catalog	SMG1P1	novel	852	5	NA	NA	44	-3445	combination_of_known_junctions	FALSE	canonical	1	1640	junction_3	53870.289765994596	NA	0	NA	TRUE	NA	NA	NA	A	coding	287	864	653	1516	15.0	51	True	AATAAA	-28
PB.11677.1	chr9	+	1524	7	full-splice_match	ANP32B	ENST00000339399.4	1463	7	-57	-4	-57	4	multi-exon	FALSE	canonical	1	437396	junction_2	1629166.9491067103	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	253	1008	20.0	-1066	False	AATAAA	-23
PB.7952.4	chr3	+	7019	14	novel_in_catalog	SLC6A6	novel	565	2	NA	NA	17	0	intron_retention	FALSE	canonical	1	81725	junction_1	65758.80266099956	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	301	1809	15.0	-20	True	AATAAA	-20
PB.11677.4	chr9	+	2746	7	full-splice_match	ANP32B	ENST00000339399.4	1463	7	-134	-1149	-134	1149	multi-exon	FALSE	canonical	1	437396	junction_2	1629166.9491067103	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	330	1085	5.0	-1143	False	NA	NA
PB.155.1	chr1	+	2627	20	novel_in_catalog	KDM1A	novel	3039	19	NA	NA	414	0	combination_of_known_junctions	FALSE	canonical	1	340484	junction_2	312075.0033699504	NA	1	NA	TRUE	NA	NA	NA	C	coding	750	2253	57	2309	20.0	-7832	False	AATAAA	-10
PB.4286.9	chr16	+	2247	5	incomplete-splice_match	CCP110	ENST00000381396.9	5446	15	44	12626	22	-1284	3prime_fragment	FALSE	canonical	1	46931	junction_1	51547.16484625998	NA	2	NA	TRUE	NA	NA	NA	C	coding	681	2043	204	2246	40.0	2	True	AAGAAA	-7
PB.4286.8	chr16	+	4520	15	full-splice_match	CCP110	ENST00000381396.9	5446	15	44	882	22	-874	multi-exon	FALSE	canonical	1	46931	junction_1	49269.73894050288	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3039	204	3242	100.0	2	True	NA	NA
PB.4286.3	chr16	+	5540	16	novel_in_catalog	CCP110	novel	5549	15	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	21387	junction_1	58675.94827388816	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	350	3388	45.0	-1	True	AATAAA	-12
PB.4286.2	chr16	+	5314	14	novel_in_catalog	CCP110	novel	5549	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	46931	junction_1	45658.59055485201	NA	3	NA	TRUE	NA	NA	NA	C	coding	991	2976	210	3185	45.0	-4	True	AATAAA	-12
PB.5339.5	chr17	+	1841	13	full-splice_match	GPS1	ENST00000578552.5	1874	13	33	0	0	0	multi-exon	FALSE	canonical	1	839384	junction_1	246144.05453123664	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	35	1498	0.0	-3	True	ATTAAA	-17
PB.5339.4	chr17	+	2435	13	full-splice_match	GPS1	ENST00000578552.5	1874	13	31	-592	-1	592	multi-exon	FALSE	canonical	1	839384	junction_1	246144.05453123664	NA	2	NA	TRUE	NA	NA	NA	C	coding	487	1464	37	1500	20.0	-5	True	AGTAAA	-16
PB.5339.3	chr17	+	1859	13	full-splice_match	GPS1	ENST00000306823.10	1842	13	-16	-1	0	1	multi-exon	TRUE	canonical	1	236835	junction_3	371797.78668211866	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	40	1515	0.0	-8	True	ATTAAA	-18
PB.4286.6	chr16	+	5395	15	full-splice_match	CCP110	ENST00000381396.9	5446	15	43	8	21	0	multi-exon	FALSE	canonical	1	46931	junction_1	49269.73894050288	NA	1	NA	TRUE	NA	NA	NA	C	coding	1012	3039	205	3243	45.0	1	True	AATAAA	-12
PB.5339.1	chr17	+	1944	14	full-splice_match	GPS1	ENST00000320548.8	1949	14	4	1	4	-1	multi-exon	TRUE	canonical	1	52347	junction_1	493340.30553499376	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	187	1602	0.0	-22	True	ATTAAA	-16
PB.12073.2	chrX	-	3092	10	full-splice_match	TFE3	ENST00000493583.5	3279	10	184	3	184	2	multi-exon	TRUE	canonical	1	119529	junction_8	174901.52845402912	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	251	1663	20.0	292	False	AATAAA	-35
PB.8536.4	chr3	+	4025	4	full-splice_match	NDUFB5	ENST00000493866.5	4046	4	20	1	0	-1	multi-exon	FALSE	canonical	1	159197	junction_1	692177.9891680077	NA	4	NA	TRUE	NA	NA	NA	C	coding	134	405	15	419	10.0	4	True	NA	NA
PB.6517.10	chr2	+	2089	7	full-splice_match	PNO1	ENST00000263657.6	2286	7	44	153	-29	-153	multi-exon	FALSE	canonical	1	117546	junction_6	137046.5179975398	NA	2	NA	TRUE	NA	NA	NA	C	coding	252	759	48	806	50.0	0	True	NA	NA
PB.9135.1	chr5	+	3820	13	novel_not_in_catalog	TENT4A	novel	5459	13	NA	NA	18	-5	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	101573.29705641005	NA	1	NA	TRUE	NA	NA	NA	A	coding	545	1638	85	1722	15.0	-7920	False	AATAAA	-12
PB.7952.1	chr3	+	4646	15	full-splice_match	SLC6A6	ENST00000649500.1	6480	15	-12	1846	-4	-1846	multi-exon	FALSE	canonical	1	81725	junction_1	68328.68552561334	NA	2	NA	TRUE	NA	NA	NA	C	coding	620	1863	330	2192	20.0	-49	True	TATAAA	-17
PB.184.3	chr1	+	3208	11	full-splice_match	MACO1	ENST00000374343.4	3917	11	-57	766	5	213	multi-exon	FALSE	canonical	1	137083	junction_1	105292.84615604233	NA	1	NA	TRUE	NA	NA	NA	C	coding	664	1995	237	2231	0.0	-6460	False	AATAAA	-19
PB.3722.1	chr15	+	6512	34	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	-719	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	B	coding	858	2577	742	3318	40.0	NA	False	AATAAA	-20
PB.3722.3	chr15	+	6447	33	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	-712	0	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	858	2577	735	3311	40.0	NA	False	AATAAA	-20
PB.3722.2	chr15	+	6354	32	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	-718	16	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	858	2577	626	3202	15.0	NA	False	AATAAA	-36
PB.3722.5	chr15	+	6210	33	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	-709	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	5	2	TRUE	NA	NA	NA	B	coding	809	2430	732	3161	40.0	NA	False	AATAAA	-20
PB.3722.4	chr15	+	6266	35	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	-712	-9	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	15	1	TRUE	NA	NA	NA	B	coding	1016	3051	735	3785	40.0	NA	False	AATAAA	-11
PB.3722.6	chr15	+	6595	35	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	-699	14	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	39	3	TRUE	NA	NA	NA	B	coding	421	1266	4129	5394	10.0	NA	False	AATAAA	-34
PB.3722.9	chr15	+	2726	1	novel_in_catalog	HERC2P2	novel	5746	32	NA	NA	8411	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	17	NA	NA	NA	NA	NA	B	coding	118	357	1509	1865	40.0	NA	False	AATAAA	-20
PB.3722.8	chr15	+	2335	12	novel_not_in_catalog	HERC2P2	novel	5181	32	NA	NA	1514	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	256	771	378	1148	40.0	NA	False	AATAAA	-20
PB.11818.7	chr9	-	3213	26	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	1	186	combination_of_known_junctions	FALSE	canonical	1	189214	junction_24	124862.77477867613	NA	4	1	TRUE	NA	NA	NA	C	coding	990	2973	55	3027	70.0	3	True	ACTAAA	-3
PB.11818.6	chr9	-	3168	25	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	-12	209	combination_of_known_junctions	FALSE	canonical	1	211097	junction_19	117144.98364514898	NA	3	NA	TRUE	NA	NA	NA	C	coding	963	2892	68	2959	50.0	-10	True	ATTAAA	-21
PB.11818.1	chr9	-	4268	26	full-splice_match	GOLGA2	ENST00000611957.4	4259	26	-9	0	-3	0	multi-exon	FALSE	canonical	1	212519	junction_24	114408.03157613717	NA	1	NA	TRUE	NA	NA	NA	C	coding	990	2973	59	3031	10.0	-1	True	AATAAA	-14
PB.11818.3	chr9	-	3488	27	novel_in_catalog	GOLGA2	novel	4260	26	NA	NA	-3	376	combination_of_known_junctions	FALSE	canonical	1	189214	junction_25	121849.67186960041	NA	1	NA	TRUE	NA	NA	NA	C	coding	1017	3054	59	3112	65.0	-1	True	NA	NA
PB.8738.6	chr4	+	3142	14	novel_in_catalog	FAM114A1	novel	567	3	NA	NA	26	-798	combination_of_known_junctions	FALSE	canonical	1	129693	junction_1	78790.98724995446	NA	1	NA	TRUE	NA	NA	NA	C	coding	563	1692	67	1758	40.0	-1	True	AATAAA	-24
PB.1118.10	chr1	+	3795	14	novel_in_catalog	RPS6KC1	novel	4082	14	NA	NA	23	0	no_combination_of_known_junctions	FALSE	canonical	1	6381	junction_5	56762.26043292869	NA	1	NA	TRUE	NA	NA	NA	C	coding	945	2838	128	2965	25.0	20	True	AATAAA	-15
PB.1118.11	chr1	+	4411	14	novel_in_catalog	RPS6KC1	novel	4082	14	NA	NA	41	0	intron_retention	FALSE	canonical	1	90562	junction_8	39504.50189430516	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	110	2983	25.0	38	True	AATAAA	-15
PB.1118.12	chr1	+	3923	13	novel_in_catalog	RPS6KC1	novel	4082	14	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	1	6827	junction_2	65294.0499983536	NA	2	NA	TRUE	NA	NA	NA	C	coding	854	2565	529	3093	25.0	41	True	AATAAA	-15
PB.8315.9	chr3	+	5877	12	novel_not_in_catalog	ARHGAP31	novel	9317	12	NA	NA	4906	-2997	any annotated donor/acceptor	FALSE	canonical	1	967	junction_1	27967.720019827106	NA	11	NA	TRUE	NA	NA	NA	C	coding	1413	4242	183	4424	40.0	6385	False	AATAAA	-20
PB.9005.18	chr4	+	4476	23	novel_in_catalog	SMARCA5	novel	7923	24	NA	NA	254	-3118	no_combination_of_known_junctions	FALSE	canonical	1	223	junction_1	299476.7542361928	NA	2	NA	TRUE	NA	NA	NA	C	coding	970	2913	380	3292	15.0	15	True	AATAAA	-37
PB.9005.15	chr4	+	3000	21	novel_in_catalog	SMARCA5	novel	7923	24	NA	NA	219	-173	no_combination_of_known_junctions	FALSE	canonical	1	16806	junction_13	318496.1368914033	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	415	2037	45.0	-20	True	NA	NA
PB.9005.14	chr4	+	4455	23	novel_in_catalog	SMARCA5	novel	7923	24	NA	NA	218	-3117	no_combination_of_known_junctions	FALSE	canonical	1	16806	junction_13	311428.0900885607	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	2059	3270	20.0	-21	True	AATAAA	-38
PB.9526.7	chr5	-	2901	8	novel_not_in_catalog	DIAPH1	novel	2606	2	NA	NA	-4413	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	563984.6578030871	NA	1	NA	TRUE	NA	NA	NA	B	coding	346	1041	32	1072	15.0	-4429	False	AATAAA	-14
PB.9526.6	chr5	-	5740	27	novel_not_in_catalog	DIAPH1	novel	2606	2	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	331995.85333494394	NA	4	NA	TRUE	NA	NA	NA	B	coding	848	2547	85	2631	15.0	0	True	AATAAA	-14
PB.9005.11	chr4	+	3296	24	full-splice_match	SMARCA5	ENST00000283131.3	7923	24	555	4072	555	-4072	multi-exon	FALSE	canonical	1	608699	junction_1	234989.39191122877	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	79	3066	20.0	31	True	AATAAA	-18
PB.9005.10	chr4	+	2453	17	incomplete-splice_match	SMARCA5	ENST00000283131.3	7923	24	219	12712	219	418	3prime_fragment	FALSE	canonical	1	608699	junction_1	141520.04859966782	NA	1	NA	TRUE	NA	NA	NA	C	coding	679	2037	415	2451	45.0	-20	True	NA	NA
PB.9526.3	chr5	-	5628	26	novel_not_in_catalog	DIAPH1	novel	2606	2	NA	NA	-3	0	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_4	336545.09557918087	NA	4	1	TRUE	NA	NA	NA	B	coding	864	2595	4	2598	20.0	272	False	AATAAA	-20
PB.9526.2	chr5	-	5629	27	novel_not_in_catalog	DIAPH1	novel	2606	2	NA	NA	16	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	351986.5627911667	NA	1	1	TRUE	NA	NA	NA	B	coding	829	2490	117	2606	15.0	291	False	AATAAA	-13
PB.11963.8	chrX	-	2067	7	incomplete-splice_match	MID1	ENST00000380782.6	3352	10	-163	21158	3	1	3prime_fragment	FALSE	canonical	1	78904	junction_6	24519.60467609994	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	350	1819	80.0	-15	True	NA	NA
PB.1110.3	chr1	+	2949	12	novel_in_catalog	PPP2R5A	novel	3128	13	NA	NA	-30	-12	no_combination_of_known_junctions	TRUE	canonical	1	23922	junction_1	145776.42911919538	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	1224	1868	15.0	-19	True	AATAAA	-12
PB.11720.6	chr9	+	2296	10	novel_not_in_catalog	UGCG	novel	4007	9	NA	NA	-107	-4	any annotated donor/acceptor	FALSE	canonical	1	1320	junction_9	151777.76645485562	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	147	1331	45.0	-97	True	AATAAA	-16
PB.11963.2	chrX	-	3750	11	novel_in_catalog	MID1	novel	6463	10	NA	NA	1	-20	combination_of_known_junctions	FALSE	canonical	1	8622	junction_8	55729.40433101721	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	352	2508	90.0	-17	True	AATAGA	-12
PB.11963.3	chrX	-	3334	10	full-splice_match	MID1	ENST00000317552.8	6463	10	313	2816	98	-20	multi-exon	FALSE	canonical	1	78904	junction_9	27987.94571080756	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	89	2092	90.0	246	False	AATAGA	-12
PB.462.4	chr1	-	4735	12	full-splice_match	SLC35D1	ENST00000235345.5	6162	12	82	1345	82	-1345	multi-exon	FALSE	canonical	1	75700	junction_2	14631.320808852844	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	5	1072	40.0	13	True	AAAAAG	-27
PB.11963.6	chrX	-	3494	11	novel_in_catalog	MID1	novel	6463	10	NA	NA	-4	-281	combination_of_known_junctions	FALSE	canonical	1	8622	junction_8	55729.40433101721	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	357	2513	35.0	-22	True	AATAAA	-14
PB.11963.7	chrX	-	3346	10	full-splice_match	MID1	ENST00000317552.8	6463	10	40	3077	-9	-281	multi-exon	FALSE	canonical	1	78904	junction_9	27987.94571080756	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	362	2365	35.0	-27	False	AATAAA	-14
PB.11963.4	chrX	-	3483	10	novel_in_catalog	MID1	novel	6463	10	NA	NA	1	-20	combination_of_known_junctions	FALSE	canonical	1	15127	junction_8	46568.9474636967	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1890	352	2241	90.0	-17	True	AATAGA	-12
PB.462.1	chr1	-	6158	12	full-splice_match	SLC35D1	ENST00000235345.5	6162	12	-46	50	-46	-50	multi-exon	FALSE	canonical	1	75700	junction_2	14631.320808852844	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	133	1200	55.0	2	True	AATAAA	-13
PB.3977.9	chr15	-	1805	7	full-splice_match	EDC3	ENST00000315127.8	3763	7	5	1953	5	-2	multi-exon	FALSE	canonical	1	200114	junction_6	45001.09841992748	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	178	1704	0.0	-23	True	NA	NA
PB.3977.8	chr15	-	3610	7	full-splice_match	EDC3	ENST00000315127.8	3763	7	9	144	-5	-127	multi-exon	FALSE	canonical	1	200114	junction_6	45001.09841992748	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	174	1700	5.0	-19	True	ATTAAA	-15
PB.6328.12	chr2	-	1321	12	incomplete-splice_match	SMC6	ENST00000351948.8	5173	27	16	53330	-11	-392	3prime_fragment	FALSE	canonical	1	80781	junction_11	72224.35592188122	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1125	195	1319	50.0	-10	True	TATAAA	-3
PB.6328.13	chr2	-	1398	13	incomplete-splice_match	SMC6	ENST00000448223.6	5233	28	-3	53332	-3	-394	3prime_fragment	FALSE	canonical	1	29231	junction_11	99374.44683965541	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1125	274	1398	50.0	-2	True	TATAAA	-1
PB.6328.10	chr2	-	2245	18	incomplete-splice_match	SMC6	ENST00000351948.8	5173	27	95	39357	38	-12	3prime_fragment	FALSE	canonical	1	80781	junction_17	64724.49220020498	NA	11	1	TRUE	NA	NA	NA	C	coding	710	2130	116	2245	70.0	69	False	ATTAAA	-40
PB.6328.11	chr2	-	1588	14	incomplete-splice_match	SMC6	ENST00000351948.8	5173	27	20	52401	-7	537	3prime_fragment	FALSE	canonical	1	80781	junction_13	69369.8157665082	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1398	191	1588	60.0	-6	True	NA	NA
PB.3977.1	chr15	-	3921	9	full-splice_match	EDC3	ENST00000647659.1	3810	9	-95	-16	-2	-1	multi-exon	FALSE	canonical	1	6324	junction_7	130957.3885500905	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	342	1868	10.0	-16	True	AATAAA	-17
PB.10454.3	chr7	-	2570	3	novel_in_catalog	HOXA3	novel	3263	3	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	9875	junction_2	17175.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	443	1332	339	1670	45.0	-1	True	AATAAA	-13
PB.3977.3	chr15	-	3750	7	full-splice_match	EDC3	ENST00000315127.8	3763	7	12	1	-2	-1	multi-exon	FALSE	canonical	1	200114	junction_6	45001.09841992748	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	171	1697	10.0	-16	True	AATAAA	-17
PB.3977.2	chr15	-	3857	8	novel_not_in_catalog	EDC3	novel	3763	7	NA	NA	3	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	134415.6950837853	NA	25	2	TRUE	NA	NA	NA	C	coding	363	1092	713	1804	10.0	-25	True	AATAAA	-17
PB.3977.5	chr15	-	3878	8	novel_in_catalog	EDC3	novel	3763	7	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	1269	junction_7	133737.51226448725	NA	25	2	TRUE	NA	NA	NA	C	coding	508	1527	299	1825	10.0	-11	True	AATAAA	-17
PB.3977.4	chr15	-	3834	8	full-splice_match	EDC3	ENST00000568176.5	1825	8	-27	-1982	2	-2	multi-exon	FALSE	canonical	1	53266	junction_7	110926.73999003273	NA	83	1	TRUE	NA	NA	NA	C	coding	508	1527	256	1782	10.0	-12	True	AATAAA	-16
PB.10454.4	chr7	-	4291	2	incomplete-splice_match	HOXA3	ENST00000317201.6	2761	5	3	15902	3	4014	3prime_fragment	FALSE	canonical	1	10632	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	129	390	2086	2475	80.0	-1	True	NA	NA
PB.36.6	chr1	-	1998	6	full-splice_match	PEX10	ENST00000447513.6	1997	6	17	-18	-14	18	multi-exon	FALSE	canonical	1	75111	junction_5	100628.41216555094	NA	0	NA	TRUE	NA	NA	NA	C	coding	326	981	53	1033	40.0	-12	True	AATAAA	-34
PB.36.4	chr1	-	2424	6	full-splice_match	PEX10	ENST00000447513.6	1997	6	-7	-420	-7	-338	multi-exon	FALSE	canonical	1	75111	junction_5	100628.41216555094	NA	7	NA	TRUE	NA	NA	NA	C	coding	326	981	77	1057	50.0	-36	True	AAGAAA	-9
PB.36.5	chr1	-	2085	6	novel_in_catalog	PEX10	novel	2871	6	NA	NA	-47	21	intron_retention	FALSE	canonical	1	7995	junction_5	124637.70877322802	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	569	1117	30.0	-18	True	AATAAA	-37
PB.36.2	chr1	-	2404	7	novel_not_in_catalog	PEX10	novel	2871	6	NA	NA	-12	-5	intron_retention	FALSE	canonical	1	5141	junction_1	129409.82447688772	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	51	1031	35.0	-10	True	AGTAAA	-22
PB.36.3	chr1	-	2872	6	novel_in_catalog	PEX10	novel	2871	6	NA	NA	-17	-17	intron_retention	FALSE	canonical	1	7995	junction_5	124637.70877322802	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	539	1087	45.0	-4	True	AGTAAA	-10
PB.9719.4	chr6	-	3168	7	novel_in_catalog	SSR1	novel	1808	10	NA	NA	-3	4	intron_retention	FALSE	canonical	1	20355	junction_1	542015.4929801105	NA	3	NA	TRUE	NA	NA	NA	C	coding	278	837	104	940	15.0	-25	True	CATAAA	-18
PB.10537.2	chr7	-	3044	4	novel_in_catalog	IGFBP3	novel	2322	6	NA	NA	0	-108	intron_retention	FALSE	canonical	1	1495560	junction_3	505712.257239892	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	133	870	40.0	-1	True	AATAAA	-13
PB.10537.3	chr7	-	2305	5	novel_not_in_catalog	IGFBP3	novel	2322	6	NA	NA	0	-109	intron_retention	FALSE	canonical	1	21893	junction_1	1097449.6331229454	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	133	1008	40.0	-1	True	AATAAA	-12
PB.10537.1	chr7	-	2498	5	full-splice_match	IGFBP3	ENST00000275521.10	2262	5	2	-238	0	-109	multi-exon	FALSE	canonical	1	1495560	junction_4	541803.1190024195	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	133	1008	40.0	-1	True	AATAAA	-12
PB.8276.10	chr3	+	3378	9	novel_not_in_catalog	NXPE3	novel	797	5	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_2	69019.46610694334	NA	12	2	TRUE	NA	NA	NA	C	coding	559	1680	832	2511	15.0	-6132	False	TATAAA	-18
PB.9719.7	chr6	-	3154	7	novel_in_catalog	SSR1	novel	1808	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	2815	junction_2	542319.7460701164	NA	5	NA	TRUE	NA	NA	NA	C	coding	214	645	79	723	10.0	0	True	CATAAA	-14
PB.10537.4	chr7	-	2514	5	full-splice_match	IGFBP3	ENST00000381083.8	1050	5	-21	-1443	0	-111	multi-exon	FALSE	canonical	1	4102	junction_4	1168004.3667979157	NA	5	NA	TRUE	NA	NA	NA	C	coding	297	894	133	1026	45.0	-1	True	AATAAA	-10
PB.6056.8	chr19	+	2380	6	full-splice_match	ZNF234	ENST00000426739.6	4551	6	-17	2188	-17	2	multi-exon	FALSE	canonical	1	23894	junction_1	18672.47926334369	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	276	2378	80.0	-29	True	NA	NA
PB.9287.14	chr5	+	2980	24	incomplete-splice_match	TNPO1	ENST00000506351.6	3028	25	-62	3373	-48	-2	3prime_fragment	FALSE	canonical	1	167413	junction_3	159596.6114952909	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	140	2812	25.0	-17	True	AATAAA	-20
PB.9287.17	chr5	+	4258	20	incomplete-splice_match	TNPO1	ENST00000506351.6	3028	25	-62	9995	-48	-6473	3prime_fragment	FALSE	canonical	1	167413	junction_3	165779.62544993678	NA	1	NA	TRUE	NA	NA	NA	C	coding	774	2325	140	2464	5.0	-17	True	ATTAAA	-17
PB.9287.16	chr5	+	4469	25	full-splice_match	TNPO1	ENST00000506351.6	3028	25	-62	-1379	-48	1379	multi-exon	FALSE	canonical	1	167413	junction_3	158178.21003800235	NA	1	NA	TRUE	NA	NA	NA	C	coding	890	2673	140	2812	10.0	-17	True	AATAAA	-23
PB.9287.11	chr5	+	3498	25	full-splice_match	TNPO1	ENST00000506351.6	3028	25	-74	-396	-60	396	multi-exon	FALSE	canonical	1	167413	junction_3	158178.21003800235	NA	2	1	TRUE	NA	NA	NA	C	coding	890	2673	152	2824	30.0	2	True	NA	NA
PB.9287.13	chr5	+	3051	25	full-splice_match	TNPO1	ENST00000506351.6	3028	25	-28	5	-14	-5	multi-exon	FALSE	canonical	1	167413	junction_3	158178.21003800235	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	106	2778	70.0	-8749	False	NA	NA
PB.9287.12	chr5	+	8537	25	full-splice_match	TNPO1	ENST00000506351.6	3028	25	-73	-5436	-59	-2346	multi-exon	FALSE	canonical	1	167413	junction_3	158178.21003800235	NA	2	NA	TRUE	NA	NA	NA	C	coding	890	2673	151	2823	20.0	3	True	AATAAA	-14
PB.11150.2	chr8	+	2149	3	incomplete-splice_match	CHD7	ENST00000423902.6	11568	38	110	86914	110	-10	3prime_fragment	FALSE	canonical	1	59113	junction_1	72415.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	593	1779	370	2148	70.0	6	True	NA	NA
PB.6056.1	chr19	+	3327	6	novel_not_in_catalog	ZNF234	novel	2292	6	NA	NA	-3	877	any annotated donor/acceptor	FALSE	canonical	1	595	junction_5	26676.106537499058	NA	3	NA	TRUE	NA	NA	NA	C	coding	583	1752	699	2450	45.0	0	True	AATAAA	-12
PB.6056.2	chr19	+	3320	6	novel_not_in_catalog	ZNF234	novel	2292	6	NA	NA	-3	882	any annotated donor/acceptor	FALSE	canonical	1	608	junction_1	26318.628707438387	NA	2	NA	TRUE	NA	NA	NA	C	coding	700	2103	336	2438	40.0	0	True	AATAAA	-17
PB.6056.3	chr19	+	3177	6	full-splice_match	ZNF234	ENST00000592437.5	2292	6	-3	-882	-3	882	multi-exon	FALSE	canonical	1	26957	junction_1	17785.507812823336	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2103	193	2295	40.0	0	True	AATAAA	-17
PB.6056.4	chr19	+	2294	6	full-splice_match	ZNF234	ENST00000592437.5	2292	6	0	-2	0	2	multi-exon	FALSE	canonical	1	26957	junction_1	17785.507812823336	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	190	2292	80.0	3	True	NA	NA
PB.6056.5	chr19	+	3263	6	full-splice_match	ZNF234	ENST00000426739.6	4551	6	-20	1308	-20	882	multi-exon	FALSE	canonical	1	23894	junction_1	18672.47926334369	NA	1	NA	TRUE	NA	NA	NA	C	coding	700	2103	279	2381	40.0	-32	True	AATAAA	-17
PB.6056.6	chr19	+	2538	6	novel_not_in_catalog	ZNF234	novel	2292	6	NA	NA	-20	2	any annotated donor/acceptor	FALSE	canonical	1	595	junction_5	27018.335526823263	NA	0	NA	TRUE	NA	NA	NA	C	coding	583	1752	785	2536	80.0	-32	True	NA	NA
PB.6056.7	chr19	+	3095	7	novel_not_in_catalog	ZNF234	novel	2292	6	NA	NA	-18	882	any annotated donor/acceptor	TRUE	canonical	1	5390	junction_6	24207.617952137847	NA	4	2	TRUE	NA	NA	NA	C	coding	393	1182	1032	2213	40.0	-30	True	AATAAA	-17
PB.8244.23	chr3	-	3425	3	full-splice_match	CGGBP1	ENST00000309534.10	4495	3	47	1023	47	-955	multi-exon	FALSE	canonical	1	516623	junction_1	26365.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	416	919	25.0	66	False	TATAAA	-18
PB.777.7	chr1	+	3710	28	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-3	122	combination_of_known_junctions	FALSE	canonical	1	11394	junction_27	410187.159633111	NA	1	NA	TRUE	NA	NA	NA	C	coding	1084	3255	80	3334	30.0	-18	True	AATAAA	-19
PB.6990.44	chr2	-	8090	47	full-splice_match	FN1	ENST00000323926.10	8708	47	206	412	205	0	multi-exon	FALSE	canonical	1	2230192	junction_22	2723971.704094946	NA	2	1	TRUE	NA	NA	NA	C	coding	2446	7341	61	7401	35.0	567	False	AATAAA	-14
PB.8072.2	chr3	-	2120	2	full-splice_match	CCR1	ENST00000296140.3	2731	2	83	528	83	-528	multi-exon	FALSE	canonical	1	73671	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	44	1111	85.0	-2	True	NA	NA
PB.777.5	chr1	+	3261	24	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	-16	-3	no_combination_of_known_junctions	FALSE	canonical	1	1951	junction_1	342066.96175754507	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	80	2911	10.0	-31	True	AATAAA	-20
PB.578.1	chr1	+	1900	16	novel_in_catalog	RNPC3	novel	2013	15	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	1	19556	junction_13	70166.34793295778	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	136	1689	40.0	-8	True	AATAAA	-14
PB.11150.3	chr8	+	2199	3	novel_in_catalog	CHD7	novel	11568	38	NA	NA	115	122	intron_retention	FALSE	canonical	1	6135	junction_1	98904.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	637	1911	288	2198	80.0	1	True	ACTAAA	-24
PB.4298.1	chr16	-	3779	1	genic	CRYM	novel	NA	NA	NA	NA	-22	-20606	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-46	False	NA	NA
PB.777.3	chr1	+	3430	25	novel_in_catalog	UBAP2L	novel	3411	25	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	1	105541	junction_1	322662.3520101504	NA	1	NA	TRUE	NA	NA	NA	C	coding	982	2949	133	3081	10.0	-6	True	AATAAA	-19
PB.10358.1	chr7	+	2541	2	full-splice_match	GPER1	ENST00000297469.3	2778	2	233	4	233	1	multi-exon	FALSE	canonical	1	18278	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	459	1586	5.0	-4191	False	AATAAA	-17
PB.10358.2	chr7	+	1912	1	novel_in_catalog	GPER1	novel	1542	2	NA	NA	223	-2939	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	105	318	242	559	70.0	-4201	False	AAGAAA	-44
PB.1310.1	chr10	+	1007	2	full-splice_match	RPP38	ENST00000378202.5	1030	2	24	-1	24	-1	multi-exon	FALSE	canonical	1	60749	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	283	852	66	917	15.0	-10	True	AATAAA	-20
PB.2851.9	chr12	-	1304	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	86	2122	0	156	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	149	766	40.0	-12	True	ATTAAA	-25
PB.2851.8	chr12	-	1843	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	94	1575	8	703	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	141	758	35.0	-4	True	AATAAA	-17
PB.2851.7	chr12	-	2551	9	novel_in_catalog	NFYB	novel	3512	8	NA	NA	-16	-1014	combination_of_known_junctions	FALSE	canonical	1	47725	junction_7	184809.8327504096	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	279	905	20.0	31	False	NA	NA
PB.2851.6	chr12	-	2328	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	110	1074	24	-1074	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	125	742	25.0	12	True	NA	NA
PB.2851.5	chr12	-	2572	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	57	883	9	-883	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	4	NA	TRUE	NA	NA	NA	C	coding	205	618	178	795	35.0	0	True	NA	NA
PB.2851.4	chr12	-	2835	9	novel_in_catalog	NFYB	novel	3512	8	NA	NA	8	-706	combination_of_known_junctions	FALSE	canonical	1	47725	junction_7	184809.8327504096	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	255	881	35.0	-1	True	GATAAA	-23
PB.2851.3	chr12	-	2780	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	27	705	-21	-705	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	208	825	35.0	26	False	GATAAA	-24
PB.2851.2	chr12	-	3505	9	novel_in_catalog	NFYB	novel	3512	8	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	47725	junction_7	184809.8327504096	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	223	849	25.0	-10	True	CATAAA	-20
PB.2851.1	chr12	-	3457	8	full-splice_match	NFYB	ENST00000240055.7	3512	8	52	3	4	-3	multi-exon	FALSE	canonical	1	200393	junction_4	145542.89378385874	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	183	800	30.0	-5	True	CATAAA	-21
PB.6580.13	chr2	-	1534	3	novel_in_catalog	EVA1A	novel	589	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	18612	junction_2	44684.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	326	784	40.0	-1	True	AATAAA	-21
PB.6580.10	chr2	-	1590	5	novel_in_catalog	EVA1A	novel	589	4	NA	NA	-20	9	no_combination_of_known_junctions	FALSE	canonical	1	9110	junction_4	38569.13598575291	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	373	831	45.0	-21	True	AATAAA	-30
PB.6580.11	chr2	-	1665	4	full-splice_match	EVA1A	ENST00000393913.7	1802	4	-22	159	1	9	multi-exon	FALSE	canonical	1	25188	junction_3	34397.00673992821	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	448	906	45.0	0	True	AATAAA	-30
PB.6580.14	chr2	-	1818	6	novel_not_in_catalog	EVA1A	novel	589	4	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	10598	junction_5	37901.09473880669	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	611	1069	40.0	0	True	AATAAA	-20
PB.10187.2	chr6	-	7117	13	full-splice_match	CEP85L	ENST00000368491.7	7673	13	293	263	259	-254	multi-exon	FALSE	canonical	1	36899	junction_12	15449.34369875375	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	330	2747	85.0	-9	True	AATACA	-36
PB.2523.1	chr12	+	2875	2	full-splice_match	KLHL42	ENST00000543254.1	772	2	-704	-1399	115	1399	multi-exon	FALSE	canonical	1	199182	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	169	1242	90.0	-128	False	NA	NA
PB.10283.1	chr6	+	2506	2	antisense	novelGene_ZBTB2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	104	315	3	317	90.0	-10	True	NA	NA
PB.2523.3	chr12	+	1639	3	full-splice_match	KLHL42	ENST00000381271.6	6703	3	210	4854	-57	30	multi-exon	FALSE	canonical	1	121738	junction_2	38722.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	102	1619	45.0	-61	True	AATAAA	-33
PB.2523.2	chr12	+	3514	3	full-splice_match	KLHL42	ENST00000381271.6	6703	3	857	2332	10	5	multi-exon	FALSE	canonical	1	121738	junction_2	38722.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	316	951	22	972	95.0	586	False	NA	NA
PB.2523.5	chr12	+	1705	4	full-splice_match	KLHL42	ENST00000539176.1	1894	4	213	-24	-26	24	multi-exon	FALSE	canonical	1	26658	junction_2	77830.33177367292	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	71	1180	45.0	-30	True	AATAAA	-27
PB.2523.4	chr12	+	2817	3	full-splice_match	KLHL42	ENST00000381271.6	6703	3	217	3669	-50	1215	multi-exon	FALSE	canonical	1	121738	junction_2	38722.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	95	1612	55.0	-54	True	AATAAA	-32
PB.702.13	chr1	-	3637	6	novel_not_in_catalog	NBPF9	novel	5835	29	NA	NA	106	-31595	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	13	NA	TRUE	NA	NA	NA	B	coding	105	318	620	937	20.0	NA	False	NA	NA
PB.6736.9	chr2	+	6660	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-19	-28	combination_of_known_junctions	FALSE	canonical	1	39395	junction_1	107817.01362272109	NA	3	NA	TRUE	NA	NA	NA	C	coding	1523	4572	431	5002	85.0	-19	True	NA	NA
PB.11860.1	chr9	+	2079	2	full-splice_match	PLPP7	ENST00000372264.3	2095	2	15	1	15	-1	multi-exon	FALSE	canonical	1	52218	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	271	816	290	1105	0.0	-14	True	AATACA	-18
PB.6736.8	chr2	+	4890	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-19	-136	combination_of_known_junctions	FALSE	canonical	1	62539	junction_20	104109.59194248136	NA	0	NA	TRUE	NA	NA	NA	C	coding	1547	4644	178	4821	25.0	-19	True	AATAAA	-16
PB.5800.1	chr19	+	2391	13	full-splice_match	AP1M1	ENST00000444449.6	2311	13	-80	0	0	0	multi-exon	FALSE	canonical	1	10972	junction_5	286047.32150568446	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	174	1481	20.0	0	True	ATTAAA	-20
PB.5800.2	chr19	+	3294	11	novel_in_catalog	AP1M1	novel	13193	12	NA	NA	-3	-7	intron_retention	FALSE	canonical	1	384849	junction_1	152929.50842646425	NA	1	NA	TRUE	NA	NA	NA	C	coding	234	705	120	824	25.0	-3	True	ATTAAA	-13
PB.5800.3	chr19	+	2296	12	full-splice_match	AP1M1	ENST00000291439.7	13193	12	333	10564	0	-2	multi-exon	FALSE	canonical	1	384849	junction_1	149917.92276690537	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	117	1388	15.0	0	True	ATTAAA	-18
PB.5800.4	chr19	+	2130	11	full-splice_match	AP1M1	ENST00000429941.6	1578	11	2	-554	0	-7	multi-exon	FALSE	canonical	1	16200	junction_8	225938.58261060683	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	115	1227	25.0	2	True	ATTAAA	-13
PB.5800.5	chr19	+	3841	10	novel_in_catalog	AP1M1	novel	13193	12	NA	NA	10	-6	intron_retention	FALSE	canonical	1	384849	junction_1	130376.45900134118	NA	2	NA	TRUE	NA	NA	NA	C	coding	234	705	105	809	20.0	12	True	ATTAAA	-14
PB.5800.6	chr19	+	1916	9	incomplete-splice_match	AP1M1	ENST00000590756.5	1705	10	10162	-432	-834	-2	5prime_fragment	FALSE	canonical	1	507553	junction_6	137218.80592591665	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	88	1008	15.0	NA	False	ATTAAA	-18
PB.4840.3	chr17	+	3816	9	novel_in_catalog	AC015688.4	novel	603	3	NA	NA	7769	8781	intron_retention	FALSE	canonical	1	1408	junction_3	268476.98022104125	NA	4	NA	TRUE	NA	NA	NA	B	coding	233	702	2539	3240	15.0	27	True	AATAAA	-27
PB.4840.2	chr17	+	1566	10	full-splice_match	LGALS9	ENST00000302228.9	3018	10	1451	1	23	-1	multi-exon	FALSE	canonical	1	1408	junction_4	254310.8342472958	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	18	989	15.0	0	True	AATAAA	-28
PB.4840.1	chr17	+	1727	11	full-splice_match	LGALS9	ENST00000395473.6	3114	11	1386	1	-4	-1	multi-exon	FALSE	canonical	1	80173	junction_5	261786.9549891476	NA	2	NA	TRUE	NA	NA	NA	C	coding	355	1068	83	1150	15.0	-4	True	AATAAA	-28
PB.9260.4	chr5	+	1588	10	incomplete-splice_match	SREK1	ENST00000334121.10	6781	12	106	8619	9	-3861	3prime_fragment	FALSE	canonical	1	227241	junction_2	176241.51589064393	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1533	54	1586	70.0	21	True	NA	NA
PB.9260.5	chr5	+	3409	1	novel_in_catalog	SREK1	novel	580	5	NA	NA	0	-6097	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-30	True	NA	NA
PB.9260.6	chr5	+	3755	12	novel_in_catalog	SREK1	novel	580	5	NA	NA	-11	-141	intron_retention	FALSE	canonical	1	94947	junction_10	200905.3201441699	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	82	1953	35.0	-7	True	ATTAAA	-30
PB.4840.4	chr17	+	1650	10	novel_in_catalog	AC015688.4	novel	603	3	NA	NA	7775	8778	no_combination_of_known_junctions	FALSE	canonical	1	3158	junction_5	263927.0736741917	NA	0	NA	TRUE	NA	NA	NA	B	coding	343	1032	46	1077	20.0	-28	False	AATAAA	-24
PB.9260.8	chr5	+	7071	8	novel_in_catalog	SREK1	novel	580	5	NA	NA	-4	52	intron_retention	FALSE	canonical	1	256510	junction_1	170424.59697928297	NA	5	NA	TRUE	NA	NA	NA	C	coding	352	1056	6016	7071	70.0	29	True	AAAAAG	-21
PB.9843.8	chr6	-	2165	4	full-splice_match	HCG18	ENST00000438412.5	2440	4	-481	756	-2	-175	multi-exon	FALSE	canonical	1	69067	junction_3	48572.111470129305	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-13	True	ATTAAA	-17
PB.1780.12	chr11	-	3477	4	incomplete-splice_match	TRIM5	ENST00000396847.7	3170	7	-10	12100	-9	2229	3prime_fragment	FALSE	canonical	1	141465	junction_3	145424.2054290367	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	247	1020	80.0	-10	True	NA	NA
PB.324.4	chr1	+	2623	10	novel_not_in_catalog	SMAP2	novel	666	7	NA	NA	6578	3	any annotated donor/acceptor	FALSE	canonical	1	1601	junction_1	331876.2752894518	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	76	1395	10.0	14	True	AATAAA	-20
PB.5565.1	chr19	-	1932	1	antisense	novelGene_CIRBP_AS_novelGene_C19orf24_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	137	414	223	636	75.0	16	False	NA	NA
PB.1686.2	chr10	+	2819	12	incomplete-splice_match	WDR11	ENST00000263461.10	4732	29	129	30026	-1	-1377	3prime_fragment	TRUE	canonical	1	112681	junction_1	70426.24928120326	NA	0	NA	TRUE	NA	NA	NA	B	coding	566	1701	118	1818	80.0	-1	True	GATAAA	-27
PB.927.9	chr1	-	2885	20	novel_not_in_catalog	KIFAP3	novel	4111	20	NA	NA	-34	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	97787.34666793332	NA	7	NA	TRUE	NA	NA	NA	C	coding	797	2394	156	2549	55.0	29	True	ATTAAA	-10
PB.927.6	chr1	-	2778	19	novel_not_in_catalog	KIFAP3	novel	4111	20	NA	NA	837	-6	any annotated donor/acceptor	FALSE	canonical	1	269	junction_18	122695.38048118535	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	463	2439	55.0	6701	False	ATTAAA	-13
PB.927.4	chr1	-	2836	20	novel_not_in_catalog	KIFAP3	novel	4111	20	NA	NA	835	-6	any annotated donor/acceptor	FALSE	canonical	1	269	junction_19	97216.43903808932	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	239	2497	55.0	6699	False	ATTAAA	-13
PB.927.5	chr1	-	2703	19	full-splice_match	KIFAP3	ENST00000367767.5	2718	19	4	11	4	-6	multi-exon	FALSE	canonical	1	5544	junction_18	97656.75882649861	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	118	2364	55.0	67	True	ATTAAA	-13
PB.927.3	chr1	-	2726	20	full-splice_match	KIFAP3	ENST00000361580.6	2957	20	216	15	109	-10	multi-exon	FALSE	canonical	1	245365	junction_13	64568.77175689426	NA	1	NA	TRUE	NA	NA	NA	C	coding	792	2379	13	2391	55.0	16	True	ATTAAA	-9
PB.656.4	chr1	-	1787	5	full-splice_match	SEC22B	ENST00000578049.3	6922	5	21	5114	21	1279	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	171	761	40.0	25	True	AATAAA	-18
PB.6921.31	chr2	-	2927	19	incomplete-splice_match	SF3B1	ENST00000335508.10	6526	25	61	10473	-3	-2303	3prime_fragment	FALSE	canonical	1	1186834	junction_8	396082.2217157025	NA	0	NA	TRUE	NA	NA	NA	C	coding	965	2895	32	2926	35.0	-3	True	NA	NA
PB.6921.33	chr2	-	2382	16	incomplete-splice_match	SF3B1	ENST00000335508.10	6526	25	59	11979	-5	-3809	3prime_fragment	FALSE	canonical	1	1186834	junction_5	311741.5494576379	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2349	34	2382	50.0	-5	True	NA	NA
PB.6921.32	chr2	-	2651	18	incomplete-splice_match	SF3B1	ENST00000335508.10	6526	25	60	11030	-4	-2860	3prime_fragment	FALSE	canonical	1	1186834	junction_7	392719.4014016627	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2619	33	2651	35.0	-4	True	NA	NA
PB.6921.35	chr2	-	1503	11	incomplete-splice_match	SF3B1	ENST00000335508.10	6526	25	63	15357	-1	2795	3prime_fragment	FALSE	canonical	1	1356001	junction_7	300859.7964540294	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1473	30	1502	70.0	-1	True	NA	NA
PB.3580.16	chr14	+	3418	10	full-splice_match	GPATCH2L	ENST00000261530.11	14007	10	-12	10601	2	954	multi-exon	FALSE	canonical	1	137170	junction_1	44274.35150440718	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	79	1527	25.0	2	True	TATAAA	-13
PB.6921.36	chr2	-	3342	10	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	-1	2795	intron_retention	FALSE	canonical	1	1486671	junction_5	278019.7490947205	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1035	2307	3341	70.0	-1	True	NA	NA
PB.6921.39	chr2	-	3301	5	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	26	595	intron_retention	FALSE	canonical	1	1568874	junction_1	278791.1693987993	NA	2	NA	TRUE	NA	NA	NA	C	coding	154	465	55	519	90.0	-26	False	NA	NA
PB.6921.38	chr2	-	3064	11	novel_in_catalog	SF3B1	novel	6526	25	NA	NA	22	2795	intron_retention	FALSE	canonical	1	108811	junction_7	582086.6237846048	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1035	2029	3063	70.0	-30	False	NA	NA
PB.11177.14	chr8	-	1942	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	8	835	8	-835	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	163	1287	40.0	-12	True	ATTAAA	-19
PB.9965.2	chr6	+	3069	16	full-splice_match	FGD2	ENST00000274963.12	3046	16	-11	-12	-10	12	multi-exon	TRUE	canonical	1	88920	junction_4	29255.879640319974	NA	2	1	TRUE	NA	NA	NA	C	coding	655	1968	183	2150	20.0	-19	True	NA	NA
PB.8387.9	chr3	-	1781	4	novel_in_catalog	CNBP	novel	1626	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	2319649	junction_2	1386276.8867575563	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	0	True	ATTAAA	-21
PB.9965.3	chr6	+	2524	16	full-splice_match	FGD2	ENST00000274963.12	3046	16	-10	532	-9	0	multi-exon	FALSE	canonical	1	88920	junction_4	29255.879640319974	NA	0	NA	TRUE	NA	NA	NA	C	coding	655	1968	182	2149	65.0	-18	True	AGTAAA	-9
PB.1686.8	chr10	+	4539	29	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_28	105854.73932298805	NA	0	NA	TRUE	NA	NA	NA	B	coding	965	2898	832	3729	10.0	-4	True	AATAAA	-16
PB.11177.16	chr8	-	1330	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	-5	1460	-5	-1460	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	2	NA	TRUE	NA	NA	NA	C	coding	374	1125	176	1300	35.0	-25	True	TATAAA	-20
PB.1686.9	chr10	+	4234	27	novel_not_in_catalog	WDR11	novel	4732	29	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	122547.66064563394	NA	0	NA	TRUE	NA	NA	NA	B	coding	458	1377	30	1406	10.0	0	True	AATAAA	-12
PB.9320.15	chr5	+	6317	19	full-splice_match	ZFYVE16	ENST00000505560.4	6599	19	50	232	0	-215	multi-exon	FALSE	canonical	1	31566	junction_1	67991.83138354849	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	172	4791	40.0	12	True	AATAAA	-16
PB.9244.7	chr5	-	1907	4	novel_not_in_catalog	SMIM15	novel	2889	3	NA	NA	-2	-895	any annotated donor/acceptor	FALSE	canonical	1	3046	junction_3	293488.2461409467	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-11	True	AATAAA	-18
PB.9320.17	chr5	+	4028	4	full-splice_match	ZFYVE16	ENST00000510995.1	2873	4	20	-1175	-12	1175	multi-exon	FALSE	canonical	1	77269	junction_1	53258.063109938776	NA	4	NA	TRUE	NA	NA	NA	C	coding	809	2430	91	2520	60.0	-476	False	AATAGA	-26
PB.9965.1	chr6	+	1565	4	full-splice_match	FGD2	ENST00000459781.5	866	4	-22	-677	-10	677	multi-exon	FALSE	canonical	1	92789	junction_2	17019.14662960514	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	183	713	90.0	-19	True	NA	NA
PB.9320.11	chr5	+	5425	18	full-splice_match	ZFYVE16	ENST00000338008.9	6773	18	49	1299	7	740	multi-exon	FALSE	canonical	1	77269	junction_1	51472.284830323784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	132	4751	20.0	-2	True	ATTAAA	-32
PB.9320.10	chr5	+	6644	18	full-splice_match	ZFYVE16	ENST00000338008.9	6773	18	38	91	-4	-91	multi-exon	FALSE	canonical	1	77269	junction_1	51472.284830323784	NA	0	NA	TRUE	NA	NA	NA	C	coding	1539	4620	143	4762	20.0	-13	True	AATAGA	-21
PB.9320.13	chr5	+	2624	2	novel_not_in_catalog	ZFYVE16	novel	6773	18	NA	NA	9	3131	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	C	coding	6	21	286	306	95.0	0	True	NA	NA
PB.9320.12	chr5	+	6685	19	full-splice_match	ZFYVE16	ENST00000505560.4	6599	19	38	-124	9	-91	multi-exon	FALSE	canonical	1	31566	junction_1	67991.83138354849	NA	1	NA	TRUE	NA	NA	NA	C	coding	1539	4620	184	4803	20.0	0	True	AATAGA	-21
PB.9020.10	chr4	+	2997	23	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	47142	2	intron_retention	FALSE	canonical	1	353	junction_1	60118.74359751543	NA	3	1	TRUE	NA	NA	NA	C	coding	756	2271	30	2300	15.0	NA	False	AATAAA	-16
PB.9020.11	chr4	+	2612	20	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	-14425	-1	intron_retention	FALSE	canonical	1	11	junction_1	68073.48867005357	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	309	1919	15.0	-9148	False	AATAAA	-12
PB.9020.12	chr4	+	2767	21	novel_not_in_catalog	ARHGAP10	novel	1559	5	NA	NA	-14423	2	intron_retention	FALSE	canonical	1	11	junction_1	62915.65754969107	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1764	307	2070	15.0	-9146	False	AATAAA	-16
PB.9020.13	chr4	+	2678	19	incomplete-splice_match	ARHGAP10	ENST00000336498.7	3299	23	125488	0	-3432	0	5prime_fragment	FALSE	canonical	1	90855	junction_16	50301.07823010468	NA	1	1	TRUE	NA	NA	NA	C	coding	587	1764	216	1979	15.0	1845	False	AATAAA	-18
PB.6982.3	chr2	-	4560	10	full-splice_match	LANCL1	ENST00000450366.6	4602	10	39	3	11	-3	multi-exon	FALSE	canonical	1	216538	junction_9	115106.63941078483	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	126	1325	20.0	0	True	AATAAA	-17
PB.8387.4	chr3	-	3237	5	full-splice_match	CNBP	ENST00000451728.6	1641	5	67	-1663	32	1660	multi-exon	FALSE	non_canonical	0	0	junction_2	1909870.6793068969	NA	3	NA	TRUE	NA	NA	NA	C	coding	178	537	72	608	40.0	0	True	AATAAA	-20
PB.9965.4	chr6	+	2220	3	full-splice_match	FGD2	ENST00000487975.5	1010	3	-62	-1148	-9	678	multi-exon	FALSE	canonical	1	92789	junction_2	19599.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	182	586	95.0	-18	True	NA	NA
PB.8387.3	chr3	-	2829	6	novel_not_in_catalog	CNBP	novel	1626	5	NA	NA	-24	1665	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1999029.4598350069	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	186	572	45.0	-25	False	AATAAA	-25
PB.3311.3	chr14	+	2548	8	novel_in_catalog	ABHD4	novel	3366	7	NA	NA	-19	-7	intron_retention	FALSE	canonical	1	12984	junction_4	151500.94390411148	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	37	894	35.0	-29	True	AATAAA	-10
PB.3311.2	chr14	+	2474	7	full-splice_match	ABHD4	ENST00000428304.6	3366	7	28	864	-25	-7	multi-exon	FALSE	canonical	1	116122	junction_1	100663.08830560595	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	43	1071	35.0	-35	True	AATAAA	-10
PB.3311.1	chr14	+	2988	7	full-splice_match	ABHD4	ENST00000428304.6	3366	7	25	353	25	-353	multi-exon	FALSE	canonical	1	116122	junction_1	100663.08830560595	NA	1	NA	TRUE	NA	NA	NA	C	coding	342	1029	46	1074	5.0	-38	True	NA	NA
PB.11336.9	chr8	-	4177	30	novel_not_in_catalog	WASHC5	novel	976	3	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	918	junction_28	103553.40743003578	NA	2	NA	TRUE	NA	NA	NA	C	coding	1159	3480	349	3828	20.0	-23	True	AGTAAA	-14
PB.8387.1	chr3	-	3265	5	full-splice_match	CNBP	ENST00000502976.5	1626	5	12	-1651	3	1651	multi-exon	FALSE	canonical	1	2319649	junction_3	1329834.6763719118	NA	2	NA	TRUE	NA	NA	NA	C	coding	170	513	133	645	25.0	2	True	AATAAA	-11
PB.980.4	chr1	+	7421	28	full-splice_match	LAMC1	ENST00000258341.4	7889	28	468	0	468	0	multi-exon	FALSE	canonical	1	693044	junction_8	203864.51252199317	NA	4	NA	TRUE	NA	NA	NA	C	coding	1487	4464	156	4619	10.0	329	False	AATAAA	-24
PB.8195.13	chr3	+	3771	6	novel_not_in_catalog	SLMAP	novel	556	2	NA	NA	85	4515	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	77814.06850280995	NA	1	NA	TRUE	NA	NA	NA	C	coding	99	300	1133	1432	70.0	6	True	AATACA	-36
PB.3663.3	chr14	-	2314	4	full-splice_match	SLC25A29	ENST00000359232.7	2385	4	64	7	21	0	multi-exon	FALSE	canonical	1	122632	junction_2	127984.16482865717	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	238	1149	15.0	0	True	AATAAA	-17
PB.3663.2	chr14	-	2482	5	full-splice_match	SLC25A29	ENST00000556868.1	1067	5	248	-1663	155	0	multi-exon	FALSE	canonical	1	33364	junction_3	140596.3377732507	NA	4	NA	TRUE	NA	NA	NA	C	coding	237	714	604	1317	15.0	262	False	AATAAA	-17
PB.10320.4	chr6	-	4289	4	novel_in_catalog	AGPAT4	novel	7705	8	NA	NA	-3	3849	combination_of_known_junctions	FALSE	canonical	1	16935	junction_1	42370.109671271275	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	217	618	70.0	-4	True	NA	NA
PB.11077.1	chr8	-	1787	8	novel_not_in_catalog	PPP2CB	novel	448	4	NA	NA	55	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	385829.1263501532	NA	0	NA	TRUE	NA	NA	NA	B	coding	309	930	248	1177	55.0	-18	True	AATAAA	-12
PB.11077.2	chr8	-	1651	8	novel_not_in_catalog	PPP2CB	novel	448	4	NA	NA	45	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	385829.1263501532	NA	0	NA	TRUE	NA	NA	NA	B	coding	309	930	112	1041	55.0	-28	True	AATAAA	-12
PB.5524.10	chr18	+	2541	11	incomplete-splice_match	CNDP2	ENST00000579847.5	2653	12	3608	9	-14	1	5prime_fragment	FALSE	canonical	1	728588	junction_3	177463.62387317576	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	60	1487	35.0	-3	True	AATAAA	-21
PB.10320.1	chr6	-	1829	9	full-splice_match	AGPAT4	ENST00000320285.8	7865	9	-14	6050	-14	-6050	multi-exon	FALSE	canonical	1	71865	junction_6	22599.90501639332	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	228	1364	20.0	-15	True	ATTAAA	-16
PB.10320.2	chr6	-	1951	10	novel_in_catalog	AGPAT4	novel	7705	8	NA	NA	0	-6051	combination_of_known_junctions	FALSE	canonical	1	6916	junction_6	44896.36646025303	NA	1	NA	TRUE	NA	NA	NA	C	coding	244	735	753	1487	15.0	-1	True	ATTAAA	-15
PB.10320.3	chr6	-	1916	10	novel_in_catalog	AGPAT4	novel	7705	8	NA	NA	-1	-6053	combination_of_known_junctions	FALSE	canonical	1	6916	junction_6	49797.540962145344	NA	0	NA	TRUE	NA	NA	NA	C	coding	133	402	215	616	10.0	-2	True	ATTAAA	-13
PB.10187.1	chr6	-	7389	13	full-splice_match	CEP85L	ENST00000368491.7	7673	13	277	7	243	2	multi-exon	TRUE	canonical	1	36899	junction_12	15449.34369875375	NA	2	NA	TRUE	NA	NA	NA	C	coding	805	2418	346	2763	40.0	42	False	AATAAA	-9
PB.11336.2	chr8	-	3817	28	novel_in_catalog	WASHC5	novel	976	3	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	17155	junction_27	83151.72923483602	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	428	3463	25.0	-28	True	AGTAAA	-19
PB.324.3	chr1	+	2582	11	novel_not_in_catalog	SMAP2	novel	666	7	NA	NA	268	0	any annotated donor/acceptor	FALSE	canonical	1	1232	junction_1	405371.4217819998	NA	5	NA	TRUE	NA	NA	NA	C	coding	448	1347	13	1359	15.0	-9718	False	AATAAA	-15
PB.8021.6	chr3	+	2647	20	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	-7	5218	any annotated donor/acceptor	FALSE	canonical	1	3327	junction_19	21316.449740131346	NA	1	NA	TRUE	NA	NA	NA	C	coding	580	1743	79	1821	25.0	-17	True	NA	NA
PB.1953.1	chr11	+	4718	11	novel_not_in_catalog	ZFP91	novel	5220	11	NA	NA	-1201	-82	any annotated donor/acceptor	FALSE	canonical	1	440	junction_1	195283.82338383794	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	400	1464	15.0	-1306	False	AATAAA	-20
PB.1953.3	chr11	+	1800	11	full-splice_match	ZFP91	ENST00000316059.6	5220	11	132	3288	132	-3288	multi-exon	FALSE	canonical	1	289007	junction_1	132582.9926438531	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	40	1752	70.0	27	True	TTTAAA	-1
PB.1953.2	chr11	+	1879	12	novel_not_in_catalog	ZFP91	novel	5220	11	NA	NA	-31	-3284	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	194755.28896719136	NA	2	1	TRUE	NA	NA	NA	C	coding	354	1065	763	1827	80.0	17	True	TTTAAA	-5
PB.1953.5	chr11	+	5062	10	novel_in_catalog	ZFP91	novel	5220	11	NA	NA	46	-83	no_combination_of_known_junctions	FALSE	canonical	1	2380	junction_1	195654.03979189615	NA	2	1	TRUE	NA	NA	NA	C	coding	354	1065	745	1809	20.0	-18	True	AATAAA	-19
PB.1953.4	chr11	+	4819	11	full-splice_match	ZFP91	ENST00000316059.6	5220	11	318	83	318	-83	multi-exon	FALSE	canonical	1	289007	junction_1	132582.9926438531	NA	3	NA	TRUE	NA	NA	NA	C	coding	354	1065	502	1566	20.0	213	False	AATAAA	-19
PB.11336.1	chr8	-	4120	29	full-splice_match	WASHC5	ENST00000318410.11	4187	29	59	8	2	-1	multi-exon	FALSE	canonical	1	139493	junction_28	68480.31795471288	NA	0	NA	TRUE	NA	NA	NA	C	coding	1159	3480	292	3771	20.0	-26	True	AGTAAA	-14
PB.898.1	chr1	+	2437	2	full-splice_match	AL451074.2	ENST00000423121.1	2150	2	-1	-286	-1	286	multi-exon	FALSE	canonical	1	2333	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-91	False	NA	NA
PB.898.2	chr1	+	2064	1	novel_in_catalog	AL451074.2	novel	2150	2	NA	NA	33	-4151	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-57	False	NA	NA
PB.2802.19	chr12	-	1936	14	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	-19	48747	-19	-6380	3prime_fragment	FALSE	canonical	1	51278	junction_13	42055.48355805429	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1650	285	1934	40.0	-56	False	AGTAAA	-45
PB.2802.18	chr12	-	2660	19	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	18	32024	14	4	3prime_fragment	FALSE	canonical	1	51278	junction_18	37187.59205142668	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2412	248	2659	70.0	-19	True	NA	NA
PB.2802.17	chr12	-	2724	19	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	65	31913	-4	115	3prime_fragment	FALSE	canonical	1	51278	junction_18	37187.59205142668	NA	22	2	TRUE	NA	NA	NA	C	coding	841	2523	201	2723	65.0	28	True	NA	NA
PB.2802.16	chr12	-	2816	20	novel_not_in_catalog	EEA1	novel	9875	29	NA	NA	-32	115	any annotated donor/acceptor	FALSE	canonical	1	6280	junction_6	57707.704734345236	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	229	1776	65.0	0	True	NA	NA
PB.2802.15	chr12	-	3090	21	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	15	28382	11	3646	3prime_fragment	FALSE	canonical	1	51278	junction_20	38857.637758360965	NA	1	NA	TRUE	NA	NA	NA	C	coding	946	2838	251	3088	75.0	-22	True	NA	NA
PB.2802.13	chr12	-	3255	22	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	62	17328	-7	14700	3prime_fragment	FALSE	canonical	1	51278	junction_21	42248.953002685514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1017	3051	204	3254	65.0	25	True	NA	NA
PB.2802.12	chr12	-	3590	23	incomplete-splice_match	EEA1	ENST00000322349.12	9875	29	11	11313	7	-11313	3prime_fragment	FALSE	canonical	1	51278	junction_22	42213.19555916273	NA	1	NA	TRUE	NA	NA	NA	C	coding	1112	3336	255	3590	15.0	-26	True	AAGAAA	-3
PB.9453.9	chr5	-	2166	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	36	2447	-33	855	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	246	1175	15.0	558	False	NA	NA
PB.656.3	chr1	-	2501	5	full-splice_match	SEC22B	ENST00000578049.3	6922	5	-5	4426	-5	1967	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	196	591	197	787	35.0	-1	True	AATAAA	-23
PB.1573.9	chr10	-	3346	30	full-splice_match	MMS19	ENST00000355839.10	3555	30	205	4	-5	-4	multi-exon	FALSE	canonical	1	24635	junction_24	165054.545733469	NA	4	3	TRUE	NA	NA	NA	C	coding	987	2964	21	2984	20.0	-2	True	AATAAA	-10
PB.1573.7	chr10	-	3480	31	full-splice_match	MMS19	ENST00000438925.6	3797	31	314	3	4	-1	multi-exon	FALSE	canonical	1	189945	junction_30	143776.50179072688	NA	0	NA	TRUE	NA	NA	NA	C	coding	1030	3093	23	3115	25.0	-4	True	AATAAA	-13
PB.1573.6	chr10	-	3966	29	novel_in_catalog	MMS19	novel	640	4	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	189945	junction_28	141532.5950297388	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	1601	3601	25.0	-17	True	AATAAA	-13
PB.1573.5	chr10	-	3458	30	novel_in_catalog	MMS19	novel	640	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	17145	junction_29	155400.95372085326	NA	0	NA	TRUE	NA	NA	NA	C	coding	872	2619	474	3092	25.0	-30	True	AATAAA	-14
PB.1573.4	chr10	-	3595	32	novel_in_catalog	MMS19	novel	640	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	10951	junction_28	184851.64444910968	NA	0	NA	TRUE	NA	NA	NA	C	coding	1069	3210	20	3229	25.0	-1	True	AATAAA	-14
PB.1573.3	chr10	-	3553	32	novel_not_in_catalog	MMS19	novel	640	4	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	202927.3986887393	NA	3	1	TRUE	NA	NA	NA	C	coding	644	1935	1253	3187	25.0	-29	True	AATAAA	-14
PB.1573.2	chr10	-	3971	29	novel_in_catalog	MMS19	novel	640	4	NA	NA	-4	0	intron_retention	FALSE	canonical	1	14893	junction_18	168873.78949847503	NA	0	NA	TRUE	NA	NA	NA	C	coding	615	1848	1758	3605	25.0	-1	True	AATAAA	-14
PB.1573.1	chr10	-	3385	31	novel_not_in_catalog	MMS19	novel	640	4	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	2842	junction_19	188066.74908559283	NA	0	NA	TRUE	NA	NA	NA	C	coding	994	2985	34	3018	20.0	-15	True	AATAAA	-15
PB.10356.2	chr7	-	2767	3	full-splice_match	COX19	ENST00000344111.3	3666	3	40	859	-10	-859	multi-exon	FALSE	canonical	1	203281	junction_2	27174.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	1176	1652	15.0	8	False	NA	NA
PB.10356.1	chr7	-	3505	3	full-splice_match	COX19	ENST00000344111.3	3666	3	70	91	20	-91	multi-exon	FALSE	canonical	1	203281	junction_2	27174.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	1146	1622	95.0	19	True	NA	NA
PB.5878.4	chr19	+	3205	5	full-splice_match	ZNF431	ENST00000311048.11	13894	5	0	10689	0	1272	multi-exon	FALSE	canonical	1	52394	junction_3	17266.689627357642	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	145	1875	20.0	0	True	NA	NA
PB.7958.4	chr3	+	4087	19	novel_in_catalog	CAPN7	novel	781	4	NA	NA	9	3	no_combination_of_known_junctions	FALSE	canonical	1	29305	junction_15	71354.82118400001	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	267	2426	25.0	-16	True	NA	NA
PB.9453.6	chr5	-	2630	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	50	1969	-19	1333	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	232	1161	35.0	-22	True	AGTAAA	-16
PB.11067.1	chr8	-	3040	1	novel_in_catalog	KIF13B	novel	8745	40	NA	NA	1	-70732	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-3	True	NA	NA
PB.2951.5	chr12	+	4216	4	full-splice_match	GATC	ENST00000551765.5	4244	4	18	10	12	-10	multi-exon	FALSE	canonical	1	184234	junction_3	49482.598169008415	NA	3	NA	TRUE	NA	NA	NA	C	coding	136	411	26	436	60.0	12	True	AATAAA	-8
PB.9196.18	chr5	-	1667	9	full-splice_match	PRKAA1	ENST00000397128.6	5088	9	22	3399	-2	-8	multi-exon	FALSE	canonical	1	288214	junction_6	81797.04108760598	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	15	1667	35.0	0	True	ATTAAA	-16
PB.5025.2	chr17	-	4086	3	full-splice_match	DUSP3	ENST00000226004.7	4110	3	22	2	22	-2	multi-exon	FALSE	canonical	1	386088	junction_2	98327.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	43	600	5.0	-22	True	AATAAA	-19
PB.9196.16	chr5	-	4069	9	full-splice_match	PRKAA1	ENST00000397128.6	5088	9	17	1002	-7	-1002	multi-exon	FALSE	canonical	1	288214	junction_6	81797.04108760598	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	20	1672	25.0	-5	True	ATTAAA	-22
PB.9196.17	chr5	-	2070	9	full-splice_match	PRKAA1	ENST00000397128.6	5088	9	17	3001	-7	390	multi-exon	FALSE	canonical	1	288214	junction_6	81797.04108760598	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	20	1672	15.0	-5	True	AATAAA	-27
PB.9196.14	chr5	-	6577	8	novel_in_catalog	PRKAA1	novel	5088	9	NA	NA	-3	-446	intron_retention	FALSE	canonical	1	288214	junction_6	76111.7573992886	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	2197	3624	20.0	223	False	AATAAA	-17
PB.9196.15	chr5	-	4170	9	full-splice_match	PRKAA1	ENST00000397128.6	5088	9	26	892	-2	-892	multi-exon	FALSE	canonical	1	288214	junction_6	81797.04108760598	NA	4	NA	TRUE	NA	NA	NA	C	coding	550	1653	11	1663	45.0	4	True	TATAAA	-16
PB.9196.13	chr5	-	4556	9	novel_not_in_catalog	PRKAA1	novel	5088	9	NA	NA	-3	-446	any annotated donor/acceptor	FALSE	canonical	1	5726	junction_7	165475.9502712932	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	188	1603	20.0	-1	True	AATAAA	-17
PB.9196.11	chr5	-	6120	8	novel_in_catalog	PRKAA1	novel	5088	9	NA	NA	5	-445	intron_retention	FALSE	canonical	1	288214	junction_5	87368.60714144833	NA	3	NA	TRUE	NA	NA	NA	C	coding	479	1440	23	1462	20.0	-8	True	AATAAA	-18
PB.5710.16	chr19	+	3633	18	full-splice_match	ILF3	ENST00000407004.7	3671	18	40	-2	7	2	multi-exon	FALSE	canonical	1	978607	junction_13	417659.92745939136	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	220	2331	5.0	22	True	AATACA	-17
PB.5710.14	chr19	+	6683	19	novel_in_catalog	ILF3	novel	6119	20	NA	NA	-13	0	intron_retention	FALSE	canonical	1	416880	junction_16	503533.04517720785	NA	6	NA	TRUE	NA	NA	NA	C	coding	559	1680	1899	3578	20.0	2	True	AATAAA	-35
PB.5710.15	chr19	+	4186	16	novel_in_catalog	ILF3	novel	6119	20	NA	NA	7	2	intron_retention	FALSE	canonical	1	79325	junction_8	603066.479775253	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	1781	2884	5.0	22	True	AATACA	-17
PB.5710.12	chr19	+	3679	18	full-splice_match	ILF3	ENST00000589998.5	2622	18	-54	-1003	3	-1	multi-exon	FALSE	canonical	1	1164883	junction_1	381452.73223899596	NA	1	1	TRUE	NA	NA	NA	C	coding	699	2100	281	2380	5.0	-8	True	AATACA	-14
PB.5710.13	chr19	+	3432	20	novel_in_catalog	ILF3	novel	6119	20	NA	NA	-16	-20	combination_of_known_junctions	FALSE	canonical	1	416880	junction_17	492856.8130033199	NA	1	1	TRUE	NA	NA	NA	C	coding	891	2676	243	2918	75.0	-1	True	NA	NA
PB.5710.10	chr19	+	3239	18	novel_in_catalog	ILF3	novel	6119	20	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	13608	junction_17	573742.6684543948	NA	2	1	TRUE	NA	NA	NA	C	coding	687	2064	285	2348	10.0	-12	True	AATACA	-13
PB.5710.11	chr19	+	4346	17	novel_in_catalog	ILF3	novel	6119	20	NA	NA	2	2	intron_retention	FALSE	canonical	1	1164883	junction_1	384887.055385078	NA	2	NA	TRUE	NA	NA	NA	C	coding	438	1317	282	1598	5.0	-9	True	AATACA	-17
PB.9308.3	chr5	-	4050	28	novel_not_in_catalog	AP3B1	novel	5838	27	NA	NA	22	-1	any annotated donor/acceptor	FALSE	canonical	1	17262	junction_2	123159.45632204552	NA	0	NA	TRUE	NA	NA	NA	C	coding	1053	3162	155	3316	20.0	-42	False	AATAAA	-17
PB.9308.2	chr5	-	3948	27	full-splice_match	AP3B1	ENST00000255194.10	5838	27	88	1802	25	-1	multi-exon	FALSE	canonical	1	267957	junction_24	81037.04946330078	NA	6	NA	TRUE	NA	NA	NA	C	coding	1094	3285	89	3373	20.0	24	True	AATAAA	-17
PB.9308.1	chr5	-	5414	27	full-splice_match	AP3B1	ENST00000255194.10	5838	27	64	360	1	-360	multi-exon	FALSE	canonical	1	267957	junction_24	81037.04946330078	NA	1	NA	TRUE	NA	NA	NA	C	coding	1094	3285	113	3397	40.0	0	True	ATTAAA	-31
PB.9453.3	chr5	-	4418	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	47	184	-22	-184	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	235	1164	10.0	-25	True	ATTAAA	-15
PB.9308.4	chr5	-	3997	27	novel_in_catalog	AP3B1	novel	5838	27	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	3462	junction_1	108510.70942292958	NA	0	NA	TRUE	NA	NA	NA	C	coding	1054	3165	116	3280	20.0	-3	True	AATAAA	-17
PB.8011.11	chr3	-	4711	5	novel_not_in_catalog	LRRFIP2	novel	2821	14	NA	NA	1	6410	any annotated donor/acceptor	FALSE	canonical	1	7283	junction_3	112174.84519350807	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-16	True	ATTAAA	-17
PB.8011.10	chr3	-	1888	16	novel_in_catalog	LRRFIP2	novel	2821	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6791	junction_6	244674.31336146969	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	391	1758	50.0	-7	True	ATTAAA	-20
PB.8011.13	chr3	-	3425	3	full-splice_match	LRRFIP2	ENST00000496825.2	409	3	-209	-2807	7	370	multi-exon	FALSE	canonical	1	12779	junction_1	132802.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	1855	2232	85.0	189	False	NA	NA
PB.8011.12	chr3	-	2182	4	novel_not_in_catalog	LRRFIP2	novel	2821	14	NA	NA	-8	3983	any annotated donor/acceptor	FALSE	canonical	1	22393	junction_1	134217.35264198226	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-25	True	ATTAAA	-15
PB.9244.1	chr5	-	4208	4	novel_not_in_catalog	SMIM15	novel	2889	3	NA	NA	31	1615	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	294866.0027684892	NA	5	1	TRUE	NA	NA	NA	B	coding	101	306	3728	4033	15.0	28	True	TATAAA	-17
PB.2924.8	chr12	+	5007	27	novel_in_catalog	TPCN1	novel	526	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1897	junction_1	84795.92420243248	NA	1	NA	TRUE	NA	NA	NA	C	coding	748	2247	256	2502	20.0	-22	True	ACTAAA	-16
PB.2924.9	chr12	+	6731	26	novel_in_catalog	TPCN1	novel	526	4	NA	NA	-10	0	intron_retention	FALSE	canonical	1	38382	junction_1	84137.04385028988	NA	2	NA	TRUE	NA	NA	NA	C	coding	618	1857	277	2133	20.0	-10	True	ACTAAA	-17
PB.2924.6	chr12	+	3629	4	novel_not_in_catalog	TPCN1	novel	526	4	NA	NA	-1	-24921	any annotated donor/acceptor	FALSE	canonical	1	2769	junction_3	20909.897194072157	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	167	676	40.0	-23	True	AATAAA	-17
PB.2924.7	chr12	+	2949	29	full-splice_match	TPCN1	ENST00000550785.5	5345	29	5	2391	1	0	multi-exon	FALSE	canonical	1	29740	junction_1	91036.40092412547	NA	0	NA	TRUE	NA	NA	NA	C	coding	888	2667	165	2831	70.0	-21	True	NA	NA
PB.2924.4	chr12	+	5273	28	full-splice_match	TPCN1	ENST00000335509.10	5274	28	-2	3	-2	0	multi-exon	FALSE	canonical	1	38382	junction_1	82178.31923836267	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	317	2767	20.0	-2018	False	ACTAAA	-17
PB.2924.5	chr12	+	2924	16	incomplete-splice_match	TPCN1	ENST00000550785.5	5345	29	-4	17197	-4	1074	3prime_fragment	FALSE	canonical	1	29740	junction_1	97773.5621590122	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	174	1757	85.0	-1998	False	NA	NA
PB.2924.2	chr12	+	5370	29	full-splice_match	TPCN1	ENST00000550785.5	5345	29	-28	3	3	0	multi-exon	FALSE	canonical	1	29740	junction_1	91036.40092412547	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	198	2864	20.0	-2022	False	ACTAAA	-17
PB.2924.3	chr12	+	2874	28	full-splice_match	TPCN1	ENST00000335509.10	5274	28	6	2394	-2	-3	multi-exon	FALSE	canonical	1	38382	junction_1	82178.31923836267	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	309	2759	65.0	-2010	False	NA	NA
PB.2924.1	chr12	+	5324	28	novel_in_catalog	TPCN1	novel	526	4	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	19887	junction_17	103165.72166408705	NA	22	3	TRUE	NA	NA	NA	C	coding	870	2613	206	2818	20.0	-2030	False	ACTAAA	-17
PB.8172.5	chr3	-	2060	11	novel_not_in_catalog	GLT8D1	novel	1849	10	NA	NA	-9	2	any annotated donor/acceptor	FALSE	canonical	1	6976	junction_10	204848.4741407902	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	586	1701	15.0	-10	True	AATAAA	-20
PB.8172.4	chr3	-	2317	8	full-splice_match	GLT8D1	ENST00000484163.5	1889	8	-112	-316	-3	2	multi-exon	FALSE	canonical	1	158261	junction_7	130937.15818308118	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	385	1164	15.0	-4	True	AATAAA	-20
PB.8172.7	chr3	-	2277	12	novel_not_in_catalog	GLT8D1	novel	1849	10	NA	NA	-2	1	any annotated donor/acceptor	FALSE	canonical	1	2856	junction_10	219425.8208514453	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	804	1919	10.0	-3	True	AATAAA	-19
PB.8172.6	chr3	-	1929	11	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	30	2	no_combination_of_known_junctions	TRUE	canonical	1	5286	junction_10	205473.16703219427	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	455	1570	15.0	2	True	AATAAA	-20
PB.7958.6	chr3	+	3734	21	full-splice_match	CAPN7	ENST00000253693.6	4353	21	4	615	4	1	multi-exon	FALSE	canonical	1	134924	junction_1	43396.75152347235	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	250	2691	30.0	1	True	AATAAA	-18
PB.8172.3	chr3	-	1908	11	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	1	86704	junction_9	167842.4076718694	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	440	1555	20.0	395	False	AATAAA	-14
PB.8172.2	chr3	-	1600	10	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	0	2	no_combination_of_known_junctions	FALSE	canonical	1	18772	junction_9	162084.62000662295	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	126	1241	15.0	-1	True	AATAAA	-20
PB.11472.1	chr9	-	6323	17	full-splice_match	HAUS6	ENST00000380502.7	6536	17	218	-5	218	5	multi-exon	TRUE	canonical	1	52	junction_7	73423.27835908782	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	383	3118	30.0	2	True	AATAAA	-18
PB.8172.9	chr3	-	2206	12	novel_in_catalog	GLT8D1	novel	1849	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	2548	junction_10	219704.50827105963	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	737	1852	20.0	-1	True	AATAAA	-15
PB.8172.8	chr3	-	1849	10	full-splice_match	GLT8D1	ENST00000266014.10	1849	10	-4	4	1	0	multi-exon	FALSE	canonical	1	158261	junction_9	121699.02650756451	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	381	1496	20.0	0	True	AATAAA	-14
PB.4578.1	chr16	+	1922	6	full-splice_match	OSGIN1	ENST00000393306.5	1940	6	18	0	0	0	multi-exon	FALSE	canonical	1	108692	junction_5	27132.643353716936	NA	0	NA	TRUE	NA	NA	NA	A	coding	477	1434	164	1597	15.0	0	True	AATAAA	-17
PB.8095.4	chr3	-	2949	13	full-splice_match	NCKIPSD	ENST00000416649.6	2925	13	-27	3	16	-3	multi-exon	FALSE	canonical	1	127015	junction_10	78472.22762381005	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	105	2252	30.0	-19	True	AATAAA	-15
PB.5025.8	chr17	-	1923	3	full-splice_match	DUSP3	ENST00000226004.7	4110	3	21	2166	21	99	multi-exon	FALSE	canonical	1	386088	junction_2	98327.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	44	601	25.0	-23	True	AATATA	-36
PB.8095.1	chr3	-	3248	12	novel_not_in_catalog	NCKIPSD	novel	2925	13	NA	NA	-14	-3	intron_retention	FALSE	canonical	0	0	junction_3	128416.06296798836	NA	29	2	TRUE	NA	NA	NA	C	coding	404	1215	92	1306	30.0	-6	True	AATAAA	-15
PB.8095.3	chr3	-	2962	13	full-splice_match	NCKIPSD	ENST00000294129.6	2989	13	24	3	-19	-3	multi-exon	TRUE	canonical	1	145299	junction_12	72660.84200408812	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	97	2265	30.0	-11	True	AATAAA	-15
PB.8095.2	chr3	-	3037	12	novel_in_catalog	NCKIPSD	novel	2925	13	NA	NA	13	-3	intron_retention	FALSE	canonical	1	127015	junction_9	79895.2144409287	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	108	1877	30.0	-22	True	AATAAA	-15
PB.557.5	chr1	+	3024	13	novel_in_catalog	PTBP2	novel	2029	13	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	75003	junction_8	45724.18401859859	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	80	1150	30.0	-2	True	ATTAAA	-14
PB.3522.21	chr14	-	4671	11	incomplete-splice_match	ACTN1	ENST00000438964.6	3043	21	-73	12295	-73	-3716	3prime_fragment	FALSE	canonical	1	1863077	junction_10	264291.2750421398	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	280	1701	60.0	7302	False	AATAAA	-20
PB.557.3	chr1	+	3294	11	incomplete-splice_match	PTBP2	ENST00000476419.5	1691	13	-38	-1299	1	-6	intron_retention	FALSE	canonical	1	75003	junction_8	44148.611564125094	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	82	1152	35.0	-4	True	ATTAAA	-13
PB.557.2	chr1	+	3084	14	full-splice_match	PTBP2	ENST00000609116.5	12014	14	-18	8948	-18	-3	multi-exon	TRUE	canonical	1	68283	junction_9	49105.43526888593	NA	2	1	TRUE	NA	NA	NA	C	coding	532	1599	101	1699	25.0	-23	True	ATTAAA	-16
PB.557.1	chr1	+	3097	14	full-splice_match	PTBP2	ENST00000370198.5	3054	14	-45	2	-18	-2	multi-exon	TRUE	canonical	1	28344	junction_8	54912.24978704256	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	101	1711	20.0	-23	True	ATTAAA	-17
PB.9356.20	chr5	-	2579	16	incomplete-splice_match	ERAP1	ENST00000443439.6	4805	19	-87	7231	-74	-21	3prime_fragment	FALSE	canonical	1	248175	junction_15	56480.6719162897	NA	4	NA	TRUE	NA	NA	NA	C	coding	796	2388	191	2578	60.0	0	True	NA	NA
PB.7958.7	chr3	+	2794	21	full-splice_match	CAPN7	ENST00000253693.6	4353	21	20	1539	20	77	multi-exon	FALSE	canonical	1	134924	junction_1	43396.75152347235	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	234	2675	20.0	17	True	ATTAAA	-14
PB.9460.8	chr5	+	3478	23	novel_not_in_catalog	DDX46	novel	1584	12	NA	NA	7	-1	any annotated donor/acceptor	FALSE	canonical	1	6953	junction_6	181877.832731551	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	903	3146	25.0	9	True	AATAAA	-14
PB.10217.22	chr6	-	1773	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-53	14071	20	1776	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	168	953	10.0	-9	True	ACTAAA	-19
PB.10217.23	chr6	-	1609	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-54	14236	19	1611	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	169	954	30.0	-10	True	AGTAAA	-24
PB.10217.20	chr6	-	2653	9	novel_in_catalog	STX7	novel	15791	10	NA	NA	20	1975	intron_retention	FALSE	canonical	1	436700	junction_8	93763.9999852522	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-9	True	ATTAAA	-25
PB.10217.21	chr6	-	1901	10	full-splice_match	STX7	ENST00000367941.6	15791	10	7	13883	7	1964	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	3	NA	TRUE	NA	NA	NA	C	coding	261	786	108	893	15.0	51	True	ATTAAA	-14
PB.10217.24	chr6	-	1356	10	full-splice_match	STX7	ENST00000367941.6	15791	10	-45	14480	28	1367	multi-exon	FALSE	canonical	1	436700	junction_9	89624.36791340033	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	160	945	25.0	-1	True	ATTAAA	-18
PB.2122.10	chr11	-	2849	1	novel_in_catalog	C11orf24	novel	941	4	NA	NA	-2	-1385	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.8527.18	chr3	-	2875	16	novel_not_in_catalog	TBL1XR1	novel	6888	7	NA	NA	-16	898	any annotated donor/acceptor	FALSE	canonical	1	481	junction_15	218395.90855575414	NA	7	1	TRUE	NA	NA	NA	C	coding	427	1284	541	1824	20.0	5292	False	ATTAAA	-17
PB.11544.6	chr9	+	2356	8	novel_in_catalog	GRHPR	novel	1136	5	NA	NA	-1	3	intron_retention	FALSE	canonical	1	247733	junction_1	586317.6041648695	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	1588	2145	15.0	26	True	ATTAAA	-17
PB.8527.13	chr3	-	3961	16	full-splice_match	TBL1XR1	ENST00000430069.5	7948	16	-5	3992	-1	-8	multi-exon	FALSE	canonical	1	27559	junction_15	177123.7590789747	NA	3	NA	TRUE	NA	NA	NA	C	coding	514	1545	266	1810	80.0	-6	True	NA	NA
PB.8527.12	chr3	-	3846	15	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	43323	junction_14	177800.94600222382	NA	4	NA	TRUE	NA	NA	NA	C	coding	514	1545	151	1695	80.0	-1	True	NA	NA
PB.9460.2	chr5	+	4717	23	full-splice_match	DDX46	ENST00000452510.6	5689	23	-5	977	-3	229	multi-exon	FALSE	non_canonical	0	0	junction_19	169254.55462455662	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	164	3262	90.0	-3	True	NA	NA
PB.8527.10	chr3	-	3921	16	full-splice_match	TBL1XR1	ENST00000457928.6	4101	16	172	8	1	-8	multi-exon	FALSE	canonical	1	119813	junction_4	161165.38292402896	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	226	1770	80.0	0	True	NA	NA
PB.8527.17	chr3	-	2940	17	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	1	898	combination_of_known_junctions	FALSE	canonical	1	25478	junction_15	193838.55293387847	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1545	345	1889	20.0	0	True	ATTAAA	-17
PB.8527.16	chr3	-	2827	16	full-splice_match	TBL1XR1	ENST00000457928.6	4101	16	168	1106	-1	900	multi-exon	FALSE	canonical	1	119813	junction_4	161165.38292402896	NA	1	NA	TRUE	NA	NA	NA	C	coding	514	1545	230	1774	20.0	-4	True	ATTAAA	-19
PB.8527.14	chr3	-	3757	15	novel_in_catalog	TBL1XR1	novel	6888	7	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	17805	junction_13	189752.93886203875	NA	1	NA	TRUE	NA	NA	NA	C	coding	427	1284	323	1606	80.0	-1	True	NA	NA
PB.1392.6	chr10	+	2422	14	full-splice_match	ALOX5	ENST00000374391.6	2506	14	90	-6	37	2	multi-exon	FALSE	canonical	1	211939	junction_10	48118.57044903944	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	399	1988	15.0	-52	False	AATAAA	-20
PB.5202.2	chr17	+	1760	11	full-splice_match	KPNA2	ENST00000330459.7	2181	11	214	207	-2	6	multi-exon	FALSE	canonical	1	558246	junction_9	720064.8775607375	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	132	1721	10.0	-2	True	CATAAA	-19
PB.5202.3	chr17	+	2811	11	full-splice_match	KPNA2	ENST00000330459.7	2181	11	215	-845	-1	845	multi-exon	FALSE	canonical	1	558246	junction_9	720064.8775607375	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	131	1720	25.0	-1	True	ATTAAA	-24
PB.5202.4	chr17	+	2658	9	novel_in_catalog	KPNA2	novel	2181	11	NA	NA	0	11	intron_retention	FALSE	canonical	1	558246	junction_8	761568.8276848324	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	809	1744	15.0	0	True	AATAAA	-29
PB.5202.5	chr17	+	2558	10	incomplete-splice_match	KPNA2	ENST00000330459.7	2181	11	216	-11	0	11	intron_retention	FALSE	canonical	1	558246	junction_9	726636.6135933896	NA	2	NA	TRUE	NA	NA	NA	C	coding	504	1515	130	1644	15.0	0	True	AATAAA	-29
PB.5202.6	chr17	+	1957	11	full-splice_match	KPNA2	ENST00000330459.7	2181	11	235	-11	19	11	multi-exon	FALSE	canonical	1	558246	junction_9	720064.8775607375	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	111	1700	15.0	19	True	AATAAA	-29
PB.1392.7	chr10	+	2739	13	novel_in_catalog	ALOX5	novel	2390	13	NA	NA	15	-2	intron_retention	FALSE	canonical	1	216830	junction_9	44816.70060577307	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	90	1544	25.0	0	True	AATAAA	-12
PB.7099.5	chr2	+	3458	10	novel_in_catalog	GPC1	novel	3713	9	NA	NA	206	27	combination_of_known_junctions	FALSE	canonical	1	10929	junction_9	264647.1094201568	NA	7	NA	TRUE	NA	NA	NA	C	coding	558	1677	43	1719	15.0	24	False	AATAAA	-44
PB.1038.2	chr1	+	1970	9	full-splice_match	ELF3	ENST00000367284.9	3179	9	30	1179	30	0	multi-exon	FALSE	canonical	1	346780	junction_1	102997.36633397175	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	169	1284	15.0	-245	False	AATAAA	-27
PB.8890.6	chr4	+	2681	11	full-splice_match	METAP1	ENST00000296411.10	2791	11	104	6	3	-6	multi-exon	FALSE	canonical	1	359066	junction_2	99967.64172651069	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	31	1191	30.0	3	True	ATTAAA	-19
PB.5904.7	chr19	-	4304	28	novel_in_catalog	ANKRD27	novel	4450	29	NA	NA	3	-1	no_combination_of_known_junctions	FALSE	canonical	1	4158	junction_3	66648.09139793618	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	127	2913	15.0	-1	True	AGTAAA	-14
PB.8890.7	chr4	+	2562	11	full-splice_match	METAP1	ENST00000296411.10	2791	11	104	125	3	-125	multi-exon	FALSE	canonical	1	359066	junction_2	99967.64172651069	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	31	1191	15.0	3	True	AGTAAA	-21
PB.8434.2	chr3	+	3101	7	full-splice_match	PXYLP1	ENST00000502783.5	2066	7	-14	-1021	1	-18	multi-exon	FALSE	canonical	1	9281	junction_2	50762.73599687953	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	379	1680	50.0	-16	True	AATAAA	-7
PB.8434.3	chr3	+	2703	6	full-splice_match	PXYLP1	ENST00000286353.8	3281	6	3	575	2	291	multi-exon	FALSE	canonical	1	49152	junction_1	33300.654524498466	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	135	1577	35.0	-11	True	AATAAA	-34
PB.8434.1	chr3	+	3218	8	full-splice_match	PXYLP1	ENST00000393010.6	3160	8	-64	6	13	-6	multi-exon	FALSE	canonical	1	2411	junction_3	52249.65724562903	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	343	1785	35.0	-45	True	AATAAA	-19
PB.9460.3	chr5	+	3726	24	novel_in_catalog	DDX46	novel	1584	12	NA	NA	-3	17	combination_of_known_junctions	FALSE	canonical	1	14477	junction_12	215502.75378878159	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	1880	3376	35.0	-3	True	AATAAA	-32
PB.7958.1	chr3	+	3482	19	novel_in_catalog	CAPN7	novel	781	4	NA	NA	-3	2	no_combination_of_known_junctions	TRUE	canonical	1	29305	junction_15	71354.82118400001	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2160	279	2438	35.0	-28	True	AATAAA	-19
PB.1392.3	chr10	+	3042	12	novel_in_catalog	ALOX5	novel	2390	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	216830	junction_9	46749.85598245373	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	106	1560	25.0	-16	True	AATAAA	-12
PB.11647.11	chr9	-	3567	16	novel_not_in_catalog	NOL8	novel	4281	17	NA	NA	0	-420	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	88051.33763244157	NA	0	NA	TRUE	NA	NA	NA	B	coding	1151	3453	114	3566	25.0	-21	True	NA	NA
PB.8890.2	chr4	+	2649	11	novel_not_in_catalog	METAP1	novel	2791	11	NA	NA	-21	-5	any annotated donor/acceptor	FALSE	canonical	1	9544	junction_6	178246.31249773444	NA	1	1	TRUE	NA	NA	NA	C	coding	367	1104	55	1158	30.0	0	True	ATTAAA	-20
PB.298.4	chr1	-	2475	6	novel_in_catalog	C1orf109	novel	2355	5	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	1	5699	junction_5	89688.45171458808	NA	0	NA	TRUE	NA	NA	NA	B	coding	203	612	319	930	50.0	2	True	AATAAA	-5
PB.11605.2	chr9	-	2219	12	novel_not_in_catalog	ALDH1A1	novel	2107	13	NA	NA	21388	-10	any annotated donor/acceptor	FALSE	canonical	1	605	junction_11	554046.0935409318	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	493	1683	20.0	-643	False	AATAAA	-15
PB.1392.1	chr10	+	2413	13	full-splice_match	ALOX5	ENST00000542434.5	2390	13	-20	-3	-20	3	multi-exon	FALSE	canonical	1	26129	junction_12	87600.57676699235	NA	2	NA	TRUE	NA	NA	NA	C	coding	617	1854	125	1978	15.0	-213	False	AATAAA	-21
PB.12161.5	chrX	+	3513	4	full-splice_match	P2RY10	ENST00000171757.2	1714	4	-27	-1772	-27	1772	multi-exon	FALSE	canonical	1	18636	junction_2	18522.048164882366	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	308	1327	15.0	-9	True	TATAAA	-17
PB.12161.4	chrX	+	3289	2	full-splice_match	P2RY10	ENST00000544091.1	1597	2	59	-1751	-30	1737	multi-exon	FALSE	canonical	1	56963	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	119	1138	80.0	-12	True	NA	NA
PB.12161.7	chrX	+	2841	2	full-splice_match	P2RY10	ENST00000544091.1	1597	2	62	-1306	-27	1292	multi-exon	FALSE	canonical	1	56963	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	116	1135	50.0	-9	True	AATGAA	-5
PB.12161.6	chrX	+	1882	4	full-splice_match	P2RY10	ENST00000171757.2	1714	4	-37	-131	-37	131	multi-exon	FALSE	canonical	1	18636	junction_2	18522.048164882366	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	318	1337	30.0	-19	True	ATTAAA	-30
PB.12161.1	chrX	+	3373	3	novel_in_catalog	P2RY10	novel	1597	2	NA	NA	-30	1772	no_combination_of_known_junctions	FALSE	canonical	1	13501	junction_2	11498.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	117	1187	15.0	-12	True	TATAAA	-17
PB.11229.2	chr8	-	2802	6	full-splice_match	C8orf88	ENST00000517562.2	894	6	-23	-1885	-23	1885	multi-exon	FALSE	canonical	1	94794	junction_5	23365.958945440267	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	194	547	15.0	294	False	AATAAA	-14
PB.12161.3	chrX	+	3429	3	full-splice_match	P2RY10	ENST00000475374.5	791	3	-27	-2611	-27	1737	multi-exon	FALSE	canonical	1	32255	junction_1	15715.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	259	1278	80.0	-9	True	NA	NA
PB.12161.2	chrX	+	1723	2	full-splice_match	P2RY10	ENST00000544091.1	1597	2	20	-146	20	132	multi-exon	FALSE	canonical	1	56963	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	158	1177	30.0	-81	False	ATTAAA	-31
PB.12161.9	chrX	+	1733	3	novel_in_catalog	P2RY10	novel	1597	2	NA	NA	-30	132	no_combination_of_known_junctions	FALSE	canonical	1	13501	junction_2	11498.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	117	1187	30.0	-12	True	ATTAAA	-31
PB.12161.8	chrX	+	1729	4	full-splice_match	P2RY10	ENST00000171757.2	1714	4	-30	15	-30	-1	multi-exon	FALSE	canonical	1	18636	junction_2	18522.048164882366	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	311	1330	40.0	-12	True	TATAAA	-14
PB.949.5	chr1	+	1902	6	full-splice_match	CACYBP	ENST00000367679.6	2766	6	260	604	38	-604	multi-exon	FALSE	canonical	1	783	junction_2	169895.48244894564	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	189	875	100.0	38	True	NA	NA
PB.1022.28	chr1	+	4836	30	full-splice_match	PTPRC	ENST00000348564.11	4753	30	108	-191	3	-2	multi-exon	FALSE	canonical	1	214755	junction_3	339037.8226913115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1145	3438	106	3543	35.0	-19	True	AATAAA	-15
PB.4124.8	chr16	+	3368	12	novel_in_catalog	FAM234A	novel	3213	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	207538	junction_1	145552.0663051627	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	171	1679	5.0	-3	True	NA	NA
PB.4124.9	chr16	+	2906	13	novel_not_in_catalog	FAM234A	novel	3213	13	NA	NA	-1	-29	any annotated donor/acceptor	FALSE	canonical	1	1567	junction_10	198997.0315091967	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	161	1837	30.0	7	True	AATAAA	-18
PB.4124.4	chr16	+	2848	13	novel_not_in_catalog	FAM234A	novel	3213	13	NA	NA	-4	-29	any annotated donor/acceptor	FALSE	canonical	1	3297	junction_6	208502.2130075735	NA	0	NA	TRUE	NA	NA	NA	C	coding	531	1596	184	1779	30.0	-16	True	AATAAA	-18
PB.4124.5	chr16	+	3025	14	novel_not_in_catalog	FAM234A	novel	3213	13	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	907	junction_2	244072.49451598275	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	274	1932	5.0	-12	True	AATAAA	-42
PB.4124.6	chr16	+	3087	14	novel_in_catalog	FAM234A	novel	3213	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	4115	junction_1	225422.71340492787	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	333	1991	5.0	-11	True	AATAAA	-45
PB.4124.7	chr16	+	2899	13	novel_in_catalog	FAM234A	novel	3213	13	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	1	77792	junction_4	192108.09906765746	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	176	1807	10.0	-8	True	AATAAA	-41
PB.4124.1	chr16	+	2901	13	full-splice_match	FAM234A	ENST00000399932.7	3213	13	278	34	-3	-29	multi-exon	FALSE	canonical	1	207538	junction_1	140021.57777970034	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	174	1832	30.0	-6	True	AATAAA	-18
PB.4124.2	chr16	+	3053	14	novel_in_catalog	FAM234A	novel	3213	13	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	5370	junction_2	242340.21546958762	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	299	1957	5.0	-34	True	AATAAA	-45
PB.4124.3	chr16	+	2790	12	novel_in_catalog	FAM234A	novel	3213	13	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	7463	junction_10	203853.5016277641	NA	1	NA	TRUE	NA	NA	NA	C	coding	500	1503	192	1694	5.0	-24	True	AATAAA	-45
PB.7998.2	chr3	-	3306	4	full-splice_match	CMTM6	ENST00000205636.3	3863	4	557	0	-55	0	multi-exon	FALSE	canonical	1	376094	junction_3	130297.29503801	NA	1	NA	TRUE	NA	NA	NA	C	coding	183	552	107	658	20.0	-42	True	AATAAA	-20
PB.68.8	chr1	-	1744	11	novel_in_catalog	ENO1	novel	1781	12	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	23516	junction_8	7376031.831858242	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	297	1388	15.0	-1	True	AATAAA	-21
PB.6646.2	chr2	+	5683	25	full-splice_match	INPP4A	ENST00000409851.7	3365	25	174	-2492	82	-880	multi-exon	FALSE	canonical	1	62349	junction_1	41738.180931664654	NA	2	NA	TRUE	NA	NA	NA	C	coding	972	2919	220	3138	20.0	174	False	AATAAA	-17
PB.8563.32	chr3	+	5311	32	full-splice_match	EIF4G1	ENST00000342981.8	5667	32	349	7	107	0	multi-exon	FALSE	canonical	1	494397	junction_2	730401.1812797193	NA	1	NA	TRUE	NA	NA	NA	C	coding	1600	4803	66	4868	15.0	-6367	False	ATTAAA	-14
PB.324.1	chr1	+	2608	10	full-splice_match	SMAP2	ENST00000372718.7	2939	10	329	2	329	0	multi-exon	FALSE	canonical	1	654133	junction_1	166798.3683851572	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	96	1385	15.0	-9802	False	AATAAA	-15
PB.5417.1	chr18	+	2415	13	incomplete-splice_match	MIB1	ENST00000261537.6	9576	21	58618	5563	1854	420	5prime_fragment	FALSE	canonical	1	193924	junction_2	37943.030063358	NA	0	NA	TRUE	NA	NA	NA	B	coding	539	1620	68	1687	65.0	NA	False	AAGAAA	-37
PB.8907.11	chr4	-	2364	3	incomplete-splice_match	SLC9B2	ENST00000503103.5	1911	10	-417	38886	24	569	3prime_fragment	FALSE	canonical	1	117053	junction_2	63838.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	105	318	609	926	60.0	-31	True	TATAAA	-36
PB.8907.10	chr4	-	2060	6	incomplete-splice_match	SLC9B2	ENST00000394785.7	3126	12	23	22665	23	436	3prime_fragment	FALSE	canonical	1	117053	junction_5	46882.52190998262	NA	2	NA	TRUE	NA	NA	NA	C	coding	238	717	610	1326	15.0	-32	True	NA	NA
PB.11497.6	chr9	-	2186	9	novel_not_in_catalog	APTX	novel	2023	8	NA	NA	-7	-4	any annotated donor/acceptor	FALSE	canonical	1	4592	junction_3	176949.45066207292	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	447	803	35.0	41	True	AATAAA	-8
PB.545.6	chr1	+	5064	3	full-splice_match	DR1	ENST00000370272.8	10148	3	20	5064	20	3266	multi-exon	FALSE	canonical	1	767600	junction_2	16222.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	176	531	739	1269	35.0	1	True	ATTAAA	-18
PB.545.7	chr1	+	1799	3	full-splice_match	DR1	ENST00000370272.8	10148	3	20	8329	20	1	multi-exon	FALSE	canonical	1	767600	junction_2	16222.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	176	531	739	1269	45.0	1	True	AATAAA	-18
PB.545.4	chr1	+	3602	3	full-splice_match	DR1	ENST00000370272.8	10148	3	20	6526	20	1804	multi-exon	FALSE	canonical	1	767600	junction_2	16222.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	176	531	739	1269	30.0	1	True	AATAAA	-26
PB.545.5	chr1	+	2749	3	full-splice_match	DR1	ENST00000370272.8	10148	3	490	6909	443	1421	multi-exon	FALSE	canonical	1	767600	junction_2	16222.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	269	799	35.0	-363	False	AATAAA	-18
PB.545.2	chr1	+	3305	4	novel_not_in_catalog	DR1	novel	10148	3	NA	NA	17	1421	intron_retention	FALSE	canonical	1	8322	junction_1	357622.4731901879	NA	2	NA	TRUE	NA	NA	NA	C	coding	135	408	1	408	35.0	-2	True	AATAAA	-18
PB.545.3	chr1	+	4764	3	full-splice_match	DR1	ENST00000370272.8	10148	3	20	5364	20	2966	multi-exon	FALSE	canonical	1	767600	junction_2	16222.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	739	1269	30.0	1	True	CATAAA	-14
PB.545.1	chr1	+	1600	3	full-splice_match	DR1	ENST00000370272.8	10148	3	19	8529	19	34	multi-exon	FALSE	canonical	1	767600	junction_2	16222.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	740	1270	35.0	0	True	TATAAA	-20
PB.11544.5	chr9	+	2406	8	novel_in_catalog	GRHPR	novel	1136	5	NA	NA	2	0	intron_retention	FALSE	canonical	1	742421	junction_1	442240.3721736008	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	54	722	25.0	0	True	ATTAAA	-13
PB.11742.1	chr9	+	2643	13	novel_in_catalog	ZNF618	novel	3018	15	NA	NA	-2	-38	combination_of_known_junctions	TRUE	canonical	1	28864	junction_9	20893.998128782237	NA	0	NA	TRUE	NA	NA	NA	B	coding	841	2526	102	2627	85.0	-81	False	NA	NA
PB.11656.21	chr9	+	2489	1	novel_in_catalog	FAM120A	novel	5118	18	NA	NA	2123	4177	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	87	264	166	429	90.0	NA	False	TTTAAA	-38
PB.2093.11	chr11	+	1629	4	full-splice_match	RBM4	ENST00000310092.11	1694	4	68	-3	-6	3	multi-exon	FALSE	canonical	1	1171671	junction_1	43303.41687057347	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	81	1175	15.0	-21	True	AATAAA	-20
PB.2093.10	chr11	+	3015	3	full-splice_match	RBM4	ENST00000396053.9	3029	3	17	-3	-7	3	multi-exon	FALSE	canonical	1	63414	junction_2	554128.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	173	522	82	603	25.0	-22	True	ATTAAA	-17
PB.2093.13	chr11	+	3307	5	novel_not_in_catalog	RBM14-RBM4	novel	1566	3	NA	NA	22018	21904	any annotated donor/acceptor	FALSE	canonical	1	225	junction_2	502638.8827916121	NA	3	NA	TRUE	NA	NA	NA	B	coding	155	468	78	545	35.0	-18	True	ATTAAA	-13
PB.2093.12	chr11	+	3702	4	novel_in_catalog	RBM14-RBM4	novel	1566	3	NA	NA	22018	21908	intron_retention	FALSE	canonical	1	10325	junction_3	563677.9848780882	NA	1	NA	TRUE	NA	NA	NA	B	coding	364	1095	78	1172	25.0	-18	True	ATTAAA	-17
PB.2093.15	chr11	+	3502	3	incomplete-splice_match	RBM4	ENST00000310092.11	1694	4	75	3	1	-1	intron_retention	FALSE	canonical	1	1171671	junction_1	33026.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	364	1095	74	1168	10.0	-14	True	AATAAA	-14
PB.2093.14	chr11	+	1655	2	full-splice_match	RBM4	ENST00000532968.1	757	2	-36	-862	0	-41	multi-exon	FALSE	canonical	1	200724	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	216	749	80.0	-15	True	AAAAAG	-37
PB.8971.4	chr4	+	3279	16	novel_not_in_catalog	SPATA5	novel	8137	16	NA	NA	-13	-4841	any annotated donor/acceptor	FALSE	canonical	1	15634	junction_1	22285.293143436298	NA	0	NA	TRUE	NA	NA	NA	B	coding	892	2679	56	2734	10.0	-13	True	ATTAAA	-12
PB.2093.16	chr11	+	3145	3	novel_in_catalog	RBM14-RBM4	novel	1566	3	NA	NA	22025	21908	no_combination_of_known_junctions	FALSE	canonical	1	63414	junction_2	68655.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	173	522	212	733	25.0	-11	True	ATTAAA	-17
PB.5407.3	chr18	+	3770	26	incomplete-splice_match	CEP192	ENST00000511820.6	6455	35	27797	-38	953	-1	5prime_fragment	FALSE	canonical	1	80210	junction_23	48722.49642579493	NA	1	NA	TRUE	NA	NA	NA	B	coding	960	2883	625	3507	40.0	9275	False	AATAAA	-15
PB.5407.2	chr18	+	7840	44	novel_in_catalog	CEP192	novel	3793	18	NA	NA	-73	0	no_combination_of_known_junctions	FALSE	canonical	1	14004	junction_12	51785.4563476216	NA	3	NA	TRUE	NA	NA	NA	B	coding	2468	7407	154	7560	25.0	1	True	AATAAA	-32
PB.5407.1	chr18	+	8049	45	novel_in_catalog	CEP192	novel	3793	18	NA	NA	-74	-2	no_combination_of_known_junctions	FALSE	canonical	1	57148	junction_12	50461.678799075584	NA	0	NA	TRUE	NA	NA	NA	B	coding	2538	7617	155	7771	30.0	0	True	AATAAA	-30
PB.11426.1	chr9	+	4586	29	incomplete-splice_match	SMARCA2	ENST00000382194.6	5679	33	29993	5	90	1	5prime_fragment	FALSE	canonical	1	197394	junction_1	142286.88346030685	NA	5	1	TRUE	NA	NA	NA	C	coding	1173	3522	232	3753	20.0	1599	False	AATAAA	-16
PB.12154.19	chrX	-	2957	9	novel_in_catalog	ATRX	novel	11167	35	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	1	11865	junction_8	111785.3710238397	NA	1	NA	TRUE	NA	NA	NA	C	coding	896	2688	270	2957	60.0	0	True	AAGAAA	-31
PB.12154.18	chrX	-	3085	10	full-splice_match	ATRX	ENST00000624032.3	3071	10	-10	-4	-2	4	multi-exon	FALSE	canonical	1	39846	junction_1	83146.069610381	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2868	218	3085	65.0	-3	True	GATAAA	-10
PB.6765.4	chr2	+	1678	14	full-splice_match	ARHGAP15	ENST00000295095.10	1775	14	93	4	-6	0	multi-exon	FALSE	canonical	1	208470	junction_1	41230.115106177414	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	75	1502	20.0	-12	True	AATAAA	-10
PB.12154.15	chrX	-	3308	9	novel_in_catalog	ATRX	novel	11167	35	NA	NA	-1	4	intron_retention	FALSE	canonical	1	23378	junction_8	91805.8225372988	NA	1	NA	TRUE	NA	NA	NA	C	coding	946	2838	471	3308	65.0	-2	True	GATAAA	-10
PB.12154.14	chrX	-	3096	8	full-splice_match	ATRX	ENST00000623321.3	1860	8	8	-1244	-1	42	multi-exon	FALSE	canonical	1	11865	junction_7	101296.57726111148	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2823	272	3094	70.0	-2	True	AAAAAG	-45
PB.12154.17	chrX	-	3060	8	novel_in_catalog	ATRX	novel	11167	35	NA	NA	2	4	intron_retention	FALSE	canonical	1	35698	junction_3	89478.02854788613	NA	0	NA	TRUE	NA	NA	NA	C	coding	946	2838	223	3060	65.0	-8	True	GATAAA	-10
PB.12154.16	chrX	-	3195	8	novel_in_catalog	ATRX	novel	11167	35	NA	NA	-2	4	intron_retention	FALSE	canonical	1	23378	junction_7	113872.88065690636	NA	2	1	TRUE	NA	NA	NA	C	coding	908	2724	472	3195	65.0	-3	True	GATAAA	-10
PB.12154.11	chrX	-	3255	10	full-splice_match	ATRX	ENST00000624032.3	3071	10	-11	-173	1	173	multi-exon	FALSE	canonical	1	39846	junction_1	83146.069610381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3036	219	3254	75.0	-4	True	CATAAA	-27
PB.12154.10	chrX	-	3236	8	incomplete-splice_match	ATRX	ENST00000395603.7	10218	34	-8	176416	1	176	3prime_fragment	FALSE	canonical	1	37413	junction_3	88961.08634013147	NA	1	1	TRUE	NA	NA	NA	C	coding	1004	3012	224	3235	80.0	-9	True	CATAAA	-30
PB.12154.12	chrX	-	3178	9	incomplete-splice_match	ATRX	ENST00000373344.10	11167	35	-8	177423	1	4	3prime_fragment	FALSE	canonical	1	135312	junction_3	57989.45940211893	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2955	224	3178	65.0	-9	True	GATAAA	-10
PB.2120.2	chr11	-	2817	13	novel_not_in_catalog	CHKA	novel	2530	12	NA	NA	53	-22	intron_retention	TRUE	canonical	1	8976	junction_11	128934.48160489195	NA	0	NA	TRUE	NA	NA	NA	B	coding	281	846	865	1710	75.0	-4	True	NA	NA
PB.2120.3	chr11	-	2581	13	novel_not_in_catalog	CHKA	novel	2530	12	NA	NA	23	-22	intron_retention	TRUE	non_canonical	0	0	junction_12	118785.10226934557	NA	0	NA	TRUE	NA	NA	NA	B	coding	409	1230	245	1474	75.0	0	True	NA	NA
PB.6192.1	chr19	-	4184	5	full-splice_match	ZNF888	ENST00000638862.1	4195	5	12	-1	1	1	multi-exon	FALSE	canonical	1	7740	junction_4	14858.356947775215	NA	1	NA	TRUE	NA	NA	NA	A	coding	682	2049	387	2435	20.0	-9	True	NA	NA
PB.7785.13	chr22	-	2316	7	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	0	-30	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	215498.39986290436	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	27	464	90.0	-1	True	NA	NA
PB.6192.3	chr19	-	4136	4	novel_in_catalog	AC010487.3	novel	1966	8	NA	NA	39293	-23754	no_combination_of_known_junctions	FALSE	canonical	1	8659	junction_3	15312.378616298935	NA	0	NA	TRUE	NA	NA	NA	B	coding	718	2157	232	2388	25.0	-15	True	NA	NA
PB.6192.2	chr19	-	4069	4	novel_in_catalog	AC010487.3	novel	1966	8	NA	NA	39295	-23753	no_combination_of_known_junctions	FALSE	canonical	1	15738	junction_3	13296.803300041705	NA	5	NA	TRUE	NA	NA	NA	B	coding	718	2157	164	2320	20.0	-13	True	NA	NA
PB.1760.1	chr11	+	1573	11	full-splice_match	LSP1	ENST00000311604.7	1699	11	125	1	125	-1	multi-exon	FALSE	canonical	1	156685	junction_8	591678.0839759489	NA	1	NA	TRUE	NA	NA	NA	A	coding	339	1020	51	1070	10.0	-4	True	AATAAA	-18
PB.6192.4	chr19	-	3991	3	novel_in_catalog	AC010487.3	novel	1966	8	NA	NA	39299	-23754	no_combination_of_known_junctions	FALSE	canonical	1	999	junction_2	21697.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	682	2049	195	2243	25.0	-9	True	NA	NA
PB.7785.14	chr22	-	1842	2	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	0	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	1	FALSE	NA	NA	NA	C	coding	145	438	986	1423	90.0	-1	True	NA	NA
PB.7785.15	chr22	-	2750	6	novel_not_in_catalog	CBX6	novel	6122	5	NA	NA	-14	-32	any annotated donor/acceptor	FALSE	canonical	1	7696	junction_1	184134.7375335789	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	41	1375	80.0	-15	True	NA	NA
PB.2776.1	chr12	-	2766	4	novel_not_in_catalog	AC090709.1	novel	716	4	NA	NA	-10	1996	any annotated donor/acceptor	FALSE	canonical	1	108	junction_3	264.7480983039454	NA	1	NA	TRUE	NA	NA	NA	B	coding	108	327	2308	2634	50.0	NA	False	AATAAA	-5
PB.7111.36	chr2	-	4513	29	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	3944	junction_28	982396.0660068517	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	329	4135	35.0	-28	False	AATAAA	-15
PB.7111.35	chr2	-	4830	29	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	17271	junction_28	981034.8451557313	NA	4	NA	TRUE	NA	NA	NA	C	coding	1268	3807	645	4451	35.0	-2	True	AATAAA	-16
PB.2776.2	chr12	-	2694	4	novel_not_in_catalog	AC090709.1	novel	716	4	NA	NA	-6	1996	any annotated donor/acceptor	FALSE	canonical	1	148	junction_3	248.21675115824792	NA	1	NA	TRUE	NA	NA	NA	B	coding	108	327	2236	2562	50.0	NA	False	AATAAA	-5
PB.7111.33	chr2	-	4211	27	novel_in_catalog	HDLBP	novel	6372	28	NA	NA	-22	-4	combination_of_known_junctions	FALSE	canonical	1	17056	junction_20	987635.9313480997	NA	2	NA	TRUE	NA	NA	NA	C	coding	1199	3600	227	3826	15.0	-1	True	AATAAA	-22
PB.1063.1	chr1	+	3024	1	antisense	novelGene_ELK4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.7111.39	chr2	-	3513	25	incomplete-splice_match	HDLBP	ENST00000391976.6	4489	28	99	1702	10	-139	3prime_fragment	FALSE	canonical	1	286089	junction_24	767743.4613145787	NA	2	1	TRUE	NA	NA	NA	C	coding	1106	3318	195	3512	50.0	31	True	NA	NA
PB.7111.38	chr2	-	3990	28	full-splice_match	HDLBP	ENST00000391975.5	6372	28	50	2332	-2	-113	multi-exon	FALSE	canonical	1	545798	junction_27	770300.9714381798	NA	1	NA	TRUE	NA	NA	NA	C	coding	1268	3807	179	3985	50.0	-3	True	NA	NA
PB.2627.1	chr12	+	3533	1	incomplete-splice_match	ZNF740	ENST00000416904.4	8578	7	10669	240	3762	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	143	432	1694	2125	20.0	9759	False	TATAAA	-15
PB.1822.25	chr11	+	3355	8	incomplete-splice_match	USP47	ENST00000527733.5	4525	28	6	48692	6	23024	3prime_fragment	FALSE	canonical	1	170913	junction_1	63919.063571337894	NA	2	NA	TRUE	NA	NA	NA	C	coding	344	1035	206	1240	35.0	6	True	TATAAA	-16
PB.1822.24	chr11	+	3141	20	incomplete-splice_match	USP47	ENST00000527733.5	4525	28	13	13457	13	-185	3prime_fragment	FALSE	canonical	1	170913	junction_1	59109.898623869245	NA	19	1	TRUE	NA	NA	NA	C	coding	981	2943	199	3141	60.0	13	True	AATGAA	-4
PB.1822.23	chr11	+	3504	22	incomplete-splice_match	USP47	ENST00000527733.5	4525	28	1	7917	1	-570	3prime_fragment	FALSE	canonical	1	170913	junction_1	72488.55556102814	NA	0	NA	TRUE	NA	NA	NA	C	coding	1098	3294	211	3504	60.0	1	True	NA	NA
PB.1822.22	chr11	+	4305	27	full-splice_match	USP47	ENST00000339865.9	7775	27	552	2918	0	-16	multi-exon	FALSE	canonical	1	48142	junction_1	112554.38039683213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1287	3864	212	4075	90.0	0	True	NA	NA
PB.1822.21	chr11	+	2003	16	incomplete-splice_match	USP47	ENST00000527733.5	4525	28	-2	22565	-2	-9293	3prime_fragment	FALSE	canonical	1	170913	junction_1	64158.4828478147	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1788	214	2001	60.0	-2	True	GATAAA	-22
PB.1822.20	chr11	+	5426	27	full-splice_match	USP47	ENST00000339865.9	7775	27	550	1799	-2	579	multi-exon	FALSE	canonical	1	48142	junction_1	112554.38039683213	NA	1	NA	TRUE	NA	NA	NA	C	coding	1287	3864	214	4077	30.0	-2	True	AATAAA	-24
PB.3264.6	chr13	+	4836	20	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	19	0	no_combination_of_known_junctions	FALSE	canonical	1	2823	junction_2	116475.56316433397	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	278	2218	20.0	0	True	ATTAAA	-21
PB.3264.7	chr13	+	4831	20	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	19	0	no_combination_of_known_junctions	FALSE	canonical	1	9784	junction_17	120201.97584432997	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	363	2213	20.0	0	True	ATTAAA	-21
PB.3264.4	chr13	+	2188	20	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	12	-4194	combination_of_known_junctions	FALSE	canonical	1	117749	junction_1	92194.01881934066	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1818	370	2187	30.0	-7	True	ATTAAA	-27
PB.3264.5	chr13	+	2418	1	novel_in_catalog	ARHGEF7	novel	4361	19	NA	NA	16	2118	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-3	True	NA	NA
PB.3264.2	chr13	+	4811	20	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	40112	junction_3	114904.27531821623	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	251	2191	15.0	-19	True	ATTAAA	-23
PB.3264.3	chr13	+	2632	21	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	-15	-2277	combination_of_known_junctions	FALSE	canonical	1	117749	junction_1	96410.17489015358	NA	4	NA	TRUE	NA	NA	NA	C	coding	646	1941	355	2295	25.0	8	True	TATAAA	-18
PB.3264.1	chr13	+	4979	21	novel_not_in_catalog	ARHGEF7	novel	557	2	NA	NA	-2	1	any annotated donor/acceptor	FALSE	canonical	1	12174	junction_16	117398.84948221385	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	384	2360	15.0	-21	True	ATTAAA	-22
PB.6275.1	chr19	+	2967	4	full-splice_match	ZNF324B	ENST00000336614.8	2996	4	8	21	1	-21	multi-exon	FALSE	canonical	1	14024	junction_1	16622.208443993102	NA	1	NA	TRUE	NA	NA	NA	A	coding	544	1635	100	1734	30.0	-13	True	AAAAAG	-19
PB.3264.8	chr13	+	4709	19	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	19	-2	no_combination_of_known_junctions	FALSE	canonical	1	21335	junction_2	116860.41434761779	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	147	2087	10.0	0	True	ATTAAA	-25
PB.3264.9	chr13	+	2050	19	novel_in_catalog	ARHGEF7	novel	557	2	NA	NA	19	-4194	combination_of_known_junctions	FALSE	canonical	1	40112	junction_3	111528.0552088427	NA	0	NA	TRUE	NA	NA	NA	C	coding	606	1818	232	2049	30.0	0	True	ATTAAA	-27
PB.2820.22	chr12	-	2235	16	full-splice_match	CDK17	ENST00000543119.6	2442	16	-82	289	-2	-169	multi-exon	FALSE	canonical	1	133606	junction_15	58623.29261786649	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	607	2178	50.0	-1	True	AGTAAA	-12
PB.3724.34	chr15	+	2251	9	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	-3	372	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	728	1810	20.0	-16	True	AATACA	-26
PB.3724.37	chr15	+	2758	8	full-splice_match	NIPA2	ENST00000337451.7	3233	8	19	456	3	212	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	595	1677	25.0	-10	True	NA	NA
PB.2820.21	chr12	-	2652	17	full-splice_match	CDK17	ENST00000261211.7	4157	17	-5	1510	-5	653	multi-exon	FALSE	canonical	1	133606	junction_16	59055.90025715969	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	610	2181	30.0	-4	True	ATTAAA	-17
PB.3724.31	chr15	+	2722	8	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	-3	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	773	1855	40.0	-16	True	AATAAA	-7
PB.3724.30	chr15	+	3107	7	full-splice_match	NIPA2	ENST00000398014.6	3130	7	32	-9	-3	9	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	479	1561	25.0	-16	True	AATAAA	-30
PB.3724.33	chr15	+	2508	6	full-splice_match	NIPA2	ENST00000398013.7	2280	6	-14	-214	-3	214	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	343	1425	25.0	-16	True	NA	NA
PB.3724.32	chr15	+	2607	8	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	-3	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	653	1735	35.0	-16	True	AATAAA	-12
PB.1251.2	chr1	-	4605	10	novel_in_catalog	ZNF496	novel	9243	2	NA	NA	-75	22	combination_of_known_junctions	FALSE	canonical	1	59434	junction_9	68300.93101004924	NA	0	NA	TRUE	NA	NA	NA	B	coding	587	1764	502	2265	20.0	-7	True	AATAAA	-23
PB.10743.1	chr7	+	1210	5	full-splice_match	ZNHIT1	ENST00000305105.2	1225	5	14	1	14	-1	multi-exon	FALSE	canonical	1	742077	junction_1	423145.9603806942	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	515	979	5.0	-8	True	AATAAA	-16
PB.3724.39	chr15	+	2643	9	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	-4	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	360	1083	689	1771	35.0	-6	True	AATAAA	-12
PB.3724.38	chr15	+	2772	10	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	5	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	818	1900	35.0	-8	True	AATAAA	-12
PB.9060.2	chr4	+	2471	12	full-splice_match	PALLD	ENST00000507735.6	4392	12	-29	1950	-6	8	multi-exon	FALSE	canonical	1	112301	junction_1	314206.60288801976	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	343	2361	80.0	-6696	False	AAGAAA	-3
PB.9060.3	chr4	+	2001	10	incomplete-splice_match	PALLD	ENST00000507735.6	4392	12	-21	4070	2	-1018	3prime_fragment	FALSE	canonical	1	112301	junction_1	251858.8195160628	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1665	335	1999	60.0	-6688	False	NA	NA
PB.9060.1	chr4	+	3619	11	novel_in_catalog	PALLD	novel	5809	21	NA	NA	67	-6	combination_of_known_junctions	FALSE	canonical	1	41323	junction_1	317226.60666507785	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	235	1593	35.0	0	True	AATAAA	-9
PB.9060.6	chr4	+	4384	12	full-splice_match	PALLD	ENST00000507735.6	4392	12	-1	9	-1	-9	multi-exon	FALSE	canonical	1	112301	junction_1	314206.60288801976	NA	2	NA	TRUE	NA	NA	NA	C	coding	672	2019	315	2333	45.0	-6668	False	AATAAA	-34
PB.10189.6	chr6	-	2460	7	full-splice_match	MCM9	ENST00000316068.7	2442	7	-20	2	-20	-2	multi-exon	FALSE	canonical	1	21845	junction_6	20538.27894444907	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	260	1435	25.0	-1	True	AATAAA	-15
PB.1406.8	chr10	-	3760	17	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-6	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96264.64590704822	NA	2	NA	TRUE	NA	NA	NA	B	coding	867	2604	102	2705	40.0	NA	False	AATAAA	-15
PB.1406.9	chr10	-	4091	17	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	4	-103	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96264.64590704822	NA	0	NA	TRUE	NA	NA	NA	B	coding	867	2604	530	3133	35.0	NA	False	AATAAA	-21
PB.1406.6	chr10	-	4042	19	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-6	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	95598.58505984514	NA	1	NA	TRUE	NA	NA	NA	B	coding	976	2931	268	3198	40.0	NA	False	AATAAA	-15
PB.1406.4	chr10	-	4151	18	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-1	-103	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	96860.28698046334	NA	0	NA	TRUE	NA	NA	NA	B	coding	976	2931	263	3193	35.0	NA	False	AATAAA	-21
PB.1406.5	chr10	-	4108	16	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	-2	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	101850.69438414906	NA	2	NA	TRUE	NA	NA	NA	B	coding	929	2790	264	3053	40.0	NA	False	AATAAA	-15
PB.1406.2	chr10	-	3625	19	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	1	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	95598.58505984514	NA	1	1	TRUE	NA	NA	NA	B	coding	894	2685	93	2777	30.0	NA	False	AATAAA	-19
PB.1406.1	chr10	-	4178	17	novel_not_in_catalog	PARG	novel	4128	19	NA	NA	5	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_14	96264.64590704822	NA	0	NA	TRUE	NA	NA	NA	B	coding	867	2604	516	3119	30.0	NA	False	AATAAA	-19
PB.11544.4	chr9	+	2580	8	novel_in_catalog	GRHPR	novel	1136	5	NA	NA	2	0	intron_retention	FALSE	canonical	1	247733	junction_1	591923.781917426	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	266	1213	25.0	0	True	ATTAAA	-13
PB.8049.4	chr3	+	4847	7	full-splice_match	SNRK	ENST00000296088.11	5183	7	31	305	-15	-305	multi-exon	FALSE	canonical	1	88767	junction_1	60775.18447433039	NA	7	NA	TRUE	NA	NA	NA	C	coding	765	2298	274	2571	35.0	-15	True	ATTAAA	-9
PB.493.10	chr1	+	3494	5	incomplete-splice_match	IFI44	ENST00000370747.8	1687	9	1	5997	0	-1347	3prime_fragment	FALSE	canonical	1	315311	junction_1	124052.19722056518	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	85	939	75.0	1	True	NA	NA
PB.2704.2	chr12	+	2993	10	full-splice_match	PIP4K2C	ENST00000354947.9	2924	10	-71	2	0	-2	multi-exon	FALSE	canonical	1	259680	junction_5	54150.620883779025	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	88	1353	35.0	-43	True	AATAAA	-17
PB.2704.3	chr12	+	3143	10	full-splice_match	PIP4K2C	ENST00000354947.9	2924	10	-52	-167	0	-3	multi-exon	FALSE	canonical	1	259680	junction_5	54150.620883779025	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	69	1334	40.0	-24	True	AATAAA	-12
PB.11256.17	chr8	+	2435	7	novel_not_in_catalog	MTDH	novel	6177	12	NA	NA	5072	1070	any annotated donor/acceptor	FALSE	canonical	1	28638	junction_1	484299.2764908733	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	28	792	20.0	-3604	False	AATAAA	-13
PB.2704.1	chr12	+	3133	9	novel_in_catalog	PIP4K2C	novel	1558	9	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	28598	junction_5	108571.86446766205	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	98	1324	40.0	-53	True	AATAAA	-12
PB.5449.4	chr18	+	3707	12	novel_in_catalog	GALNT1	novel	272	3	NA	NA	51	-212	combination_of_known_junctions	FALSE	canonical	1	40045	junction_1	254026.33940340558	NA	3	NA	TRUE	NA	NA	NA	B	coding	559	1680	176	1855	20.0	35	False	AATAAA	-17
PB.11256.10	chr8	+	1978	12	full-splice_match	MTDH	ENST00000336273.7	6177	12	57	4142	57	11	multi-exon	FALSE	canonical	1	758764	junction_1	215577.21031858586	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1707	272	1978	80.0	52	True	NA	NA
PB.11256.13	chr8	+	1926	11	full-splice_match	MTDH	ENST00000519934.5	2184	11	-357	615	10	11	multi-exon	FALSE	canonical	1	174118	junction_6	370084.3895243354	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1608	319	1926	80.0	5	True	NA	NA
PB.11256.12	chr8	+	3762	1	novel_in_catalog	MTDH	novel	6177	12	NA	NA	5	-43219	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	131	396	324	719	95.0	0	True	NA	NA
PB.1620.1	chr10	+	1255	5	novel_in_catalog	FBXL15	novel	874	4	NA	NA	-10	4	combination_of_known_junctions	TRUE	canonical	1	35928	junction_1	121731.21672562054	NA	1	NA	TRUE	NA	NA	NA	B	coding	300	903	206	1108	5.0	-5	True	AATAAA	-20
PB.7254.1	chr20	+	2997	19	novel_in_catalog	ACSS2	novel	455	2	NA	NA	-35	-5	combination_of_known_junctions	FALSE	canonical	1	7821	junction_2	144697.73857986357	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	110	2254	25.0	-75	False	AATAAA	-13
PB.1620.2	chr10	+	1170	3	novel_in_catalog	FBXL15	novel	874	4	NA	NA	340	4	intron_retention	FALSE	canonical	1	167694	junction_1	99861.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	12	39	985	1023	5.0	-23	True	AATAAA	-20
PB.8824.7	chr4	-	1456	9	full-splice_match	RCHY1	ENST00000324439.9	4686	9	267	2963	0	8	multi-exon	FALSE	canonical	1	287354	junction_6	45102.285415347855	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	133	918	35.0	-16	True	AATAAA	-22
PB.6735.1	chr2	-	4126	21	full-splice_match	SAP130	ENST00000643581.1	4143	21	26	-9	26	2	multi-exon	FALSE	canonical	1	59031	junction_20	65553.2886235313	NA	0	NA	TRUE	NA	NA	NA	C	coding	1057	3174	162	3335	25.0	-2	True	AATAAA	-29
PB.7650.4	chr22	-	4049	2	full-splice_match	ZNF70	ENST00000341976.4	6924	2	-32	2907	-32	-2907	multi-exon	FALSE	canonical	1	14639	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	446	1341	494	1834	25.0	-13	True	NA	NA
PB.493.11	chr1	+	5484	8	novel_in_catalog	IFI44	novel	819	7	NA	NA	0	-2	intron_retention	FALSE	canonical	1	201516	junction_6	149699.22864360322	NA	3	NA	TRUE	NA	NA	NA	C	coding	284	855	85	939	25.0	1	True	AATAAA	-22
PB.7650.2	chr22	-	4283	3	novel_not_in_catalog	ZNF70	novel	6924	2	NA	NA	-33	-2899	any annotated donor/acceptor	FALSE	canonical	1	764	junction_2	1918.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	720	2060	25.0	-14	True	NA	NA
PB.1433.10	chr10	+	2328	10	novel_not_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-11	2	any annotated donor/acceptor	FALSE	canonical	1	3704	junction_8	773947.5684688941	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	177	1193	20.0	0	True	AATAAA	-17
PB.1433.11	chr10	+	2168	9	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	232878	junction_2	894774.6414555665	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	500	1033	20.0	0	True	AATAAA	-17
PB.4263.10	chr16	+	3926	29	incomplete-splice_match	NOMO1	ENST00000620755.4	3921	32	7581	0	-7160	0	intron_retention	FALSE	canonical	1	761	junction_1	335862.38853705593	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2982	434	3415	25.0	NA	False	AATAAA	-28
PB.1433.13	chr10	+	2312	10	full-splice_match	HNRNPH3	ENST00000354695.5	1332	10	-57	-923	-10	4	multi-exon	FALSE	canonical	1	698151	junction_4	672172.7165386793	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	176	1171	20.0	1	True	AATAAA	-23
PB.1433.14	chr10	+	3161	10	full-splice_match	HNRNPH3	ENST00000265866.11	2339	10	-8	-814	-8	810	multi-exon	FALSE	canonical	1	841758	junction_1	537410.0367184984	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	174	1214	25.0	3	True	AATAAA	-21
PB.1433.15	chr10	+	2226	9	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	1	232878	junction_2	847342.0963781393	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	456	1091	20.0	6	True	AATAAA	-17
PB.1433.16	chr10	+	2302	10	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-10	3	combination_of_known_junctions	FALSE	canonical	1	653847	junction_1	707277.1353530452	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	167	1162	20.0	-3	True	AATAAA	-22
PB.1433.17	chr10	+	3899	6	novel_in_catalog	HNRNPH3	novel	3356	8	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	653847	junction_1	690726.8429573589	NA	3	NA	TRUE	NA	NA	NA	C	coding	155	468	2056	2523	20.0	1	True	AATAAA	-18
PB.1433.18	chr10	+	2937	10	full-splice_match	HNRNPH3	ENST00000265866.11	2339	10	22	-620	-6	616	multi-exon	FALSE	canonical	1	841758	junction_1	537410.0367184984	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	144	1184	95.0	1	True	CATAAA	-8
PB.1090.30	chr1	+	2086	3	incomplete-splice_match	CD46	ENST00000462968.2	473	6	14731	-279	14731	-3	intron_retention	FALSE	canonical	1	1194657	junction_2	372462.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	5136	False	AATAAA	-14
PB.8824.6	chr4	-	1601	9	full-splice_match	RCHY1	ENST00000324439.9	4686	9	293	2792	11	179	multi-exon	FALSE	canonical	1	287354	junction_6	45102.285415347855	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	107	892	30.0	10	True	AATAAA	-14
PB.8227.4	chr3	-	1928	15	full-splice_match	FOXP1	ENST00000650387.1	1948	15	20	0	0	0	multi-exon	FALSE	canonical	1	29009	junction_14	93036.70807610163	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	162	1892	90.0	483	False	AATGAA	-7
PB.3567.2	chr14	+	2478	7	novel_in_catalog	EIF2B2	novel	4314	8	NA	NA	2	26	intron_retention	FALSE	canonical	1	448084	junction_1	49200.22206815286	NA	2	NA	TRUE	NA	NA	NA	C	coding	227	684	57	740	20.0	-6	True	AATAAA	-17
PB.10743.2	chr7	+	1732	6	novel_not_in_catalog	ZNHIT1	novel	1225	5	NA	NA	-7	-2	any annotated donor/acceptor	FALSE	canonical	1	1092	junction_1	817266.6398877174	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-6	True	AATAAA	-15
PB.8227.2	chr3	-	2646	21	full-splice_match	FOXP1	ENST00000649528.1	3103	21	19	438	1	0	multi-exon	TRUE	canonical	1	25901	junction_20	118330.42165368971	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	580	2610	90.0	-3	True	AATGAA	-7
PB.3567.1	chr14	+	1520	8	full-splice_match	EIF2B2	ENST00000266126.9	4314	8	18	2776	-4	27	multi-exon	FALSE	canonical	1	448084	junction_1	49818.148278698274	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	63	1118	20.0	-12	True	AATAAA	-18
PB.931.5	chr1	+	3678	16	incomplete-splice_match	PRRC2C	ENST00000367742.7	10366	34	-34	52643	-34	8076	3prime_fragment	FALSE	canonical	1	473026	junction_1	147445.4398174457	NA	0	NA	TRUE	NA	NA	NA	C	coding	1134	3402	277	3678	65.0	8	True	NA	NA
PB.6341.2	chr2	-	1982	5	novel_in_catalog	HS1BP3	novel	841	6	NA	NA	6	3	no_combination_of_known_junctions	FALSE	canonical	1	3602	junction_4	94899.24325402969	NA	0	NA	TRUE	NA	NA	NA	C	coding	186	561	254	814	20.0	-1	True	AATAAA	-18
PB.9155.1	chr5	+	3976	1	intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	105	318	3089	3406	20.0	-34	False	NA	NA
PB.10769.3	chr7	-	3574	16	full-splice_match	SRPK2	ENST00000393651.7	3650	16	72	4	72	-3	multi-exon	FALSE	canonical	1	65457	junction_7	162081.38971634657	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	17	2116	20.0	568	False	ATTAAA	-20
PB.10769.2	chr7	-	3728	17	novel_in_catalog	SRPK2	novel	715	3	NA	NA	-9	1	intron_retention	FALSE	canonical	1	17497	junction_15	167465.73833096243	NA	11	2	TRUE	NA	NA	NA	C	coding	688	2067	199	2265	15.0	0	True	ATTAAA	-25
PB.485.9	chr1	+	3699	3	novel_not_in_catalog	MIGA1	novel	5288	16	NA	NA	6	-70718	any annotated donor/acceptor	FALSE	canonical	1	11477	junction_2	41295.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	106	321	15	335	15.0	-16	True	NA	NA
PB.485.8	chr1	+	4455	17	novel_not_in_catalog	MIGA1	novel	5288	16	NA	NA	3	16	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	37640.07125038919	NA	3	1	TRUE	NA	NA	NA	C	coding	633	1902	18	1919	100.0	-19	True	NA	NA
PB.6700.2	chr2	+	5042	16	novel_in_catalog	PSD4	novel	910	2	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	32636	junction_14	95418.70655971444	NA	0	NA	TRUE	NA	NA	NA	C	coding	965	2898	207	3104	25.0	-13	True	NA	NA
PB.6700.3	chr2	+	5309	16	novel_in_catalog	PSD4	novel	910	2	NA	NA	-9	1	intron_retention	FALSE	canonical	1	147699	junction_12	70024.40846035205	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	1778	3811	25.0	-11	True	AATAAA	-14
PB.485.5	chr1	+	2689	16	full-splice_match	MIGA1	ENST00000370791.7	5288	16	13	2586	1	-2490	multi-exon	FALSE	canonical	1	81529	junction_15	21145.461347112345	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	20	1918	60.0	-21	True	ATTAAA	-8
PB.6700.1	chr2	+	5227	17	full-splice_match	PSD4	ENST00000245796.10	5188	17	-35	-4	-35	4	multi-exon	FALSE	canonical	1	147699	junction_13	70873.20405944932	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	231	3401	5.0	-6590	False	NA	NA
PB.5625.1	chr19	+	3269	15	full-splice_match	CHAF1A	ENST00000301280.9	3339	15	-65	135	-65	-135	multi-exon	FALSE	canonical	1	124963	junction_1	89657.04372888991	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	167	3037	20.0	-94	False	AATAAA	-25
PB.6700.7	chr2	+	2847	7	novel_in_catalog	PSD4	novel	910	2	NA	NA	0	-2	no_combination_of_known_junctions	FALSE	canonical	1	104	junction_1	96931.7932706636	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	143	1027	15.0	-2	True	NA	NA
PB.6700.4	chr2	+	4865	17	novel_in_catalog	PSD4	novel	910	2	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	143657	junction_13	71350.9023298048	NA	1	NA	TRUE	NA	NA	NA	C	coding	1055	3168	204	3371	35.0	-10	True	AATAAA	-10
PB.5625.2	chr19	+	3392	15	full-splice_match	CHAF1A	ENST00000301280.9	3339	15	-49	-4	-49	4	multi-exon	FALSE	canonical	1	124963	junction_1	89657.04372888991	NA	2	NA	TRUE	NA	NA	NA	C	coding	956	2871	151	3021	5.0	-78	False	TATAAA	-18
PB.493.13	chr1	+	7533	7	novel_in_catalog	IFI44	novel	819	7	NA	NA	0	-1	intron_retention	FALSE	canonical	1	315311	junction_1	124751.06044272063	NA	4	NA	TRUE	NA	NA	NA	C	coding	284	855	84	938	20.0	2	True	AATAAA	-23
PB.10911.2	chr7	+	2791	5	full-splice_match	ZNF212	ENST00000335870.6	2810	5	0	19	0	-19	multi-exon	FALSE	canonical	1	58942	junction_1	30036.143768799615	NA	2	NA	TRUE	NA	NA	NA	C	coding	495	1488	129	1616	75.0	0	True	AATAAA	-14
PB.931.4	chr1	+	1374	10	incomplete-splice_match	PRRC2C	ENST00000367742.7	10366	34	-40	68654	-40	2	3prime_fragment	FALSE	canonical	1	473026	junction_1	107424.45423346596	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1092	283	1374	70.0	2	True	AAAACA	-6
PB.10675.26	chr7	-	1555	5	full-splice_match	SAMD9L	ENST00000318238.8	7134	5	-17	5596	-16	112	multi-exon	FALSE	canonical	1	72731	junction_3	35372.654108611925	NA	0	NA	TRUE	NA	NA	NA	C	coding	107	321	1235	1555	65.0	-17	True	AAAACA	-28
PB.10675.24	chr7	-	4798	6	novel_not_in_catalog	SAMD9L	novel	7134	5	NA	NA	1	-640	intron_retention	FALSE	canonical	1	4680	junction_3	54937.25633338454	NA	16	NA	TRUE	NA	NA	NA	C	coding	1371	4113	684	4796	55.0	1	True	AATGAA	-27
PB.10675.25	chr7	-	5339	5	full-splice_match	SAMD9L	ENST00000318238.8	7134	5	-7	1802	-6	-640	multi-exon	FALSE	canonical	1	72731	junction_3	35372.654108611925	NA	1	NA	TRUE	NA	NA	NA	C	coding	1371	4113	1225	5337	55.0	-7	True	AATGAA	-27
PB.10675.22	chr7	-	4992	6	full-splice_match	SAMD9L	ENST00000437805.5	5757	6	-46	811	-22	-627	multi-exon	FALSE	canonical	1	37328	junction_3	42014.129164365644	NA	0	NA	TRUE	NA	NA	NA	C	coding	1376	4128	865	4992	60.0	-23	True	AAAAAG	-7
PB.10675.23	chr7	-	4768	6	full-splice_match	SAMD9L	ENST00000411955.5	5831	6	-31	1094	-16	-640	multi-exon	FALSE	canonical	1	37328	junction_3	47046.002185095385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1371	4113	654	4766	55.0	-17	True	AATGAA	-27
PB.6266.8	chr19	+	3133	7	novel_in_catalog	ZNF544	novel	3587	7	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	25269	junction_3	115954.01172974663	NA	2	NA	TRUE	NA	NA	NA	C	coding	573	1722	688	2409	25.0	3	True	AATAAA	-16
PB.10675.21	chr7	-	5513	4	full-splice_match	SAMD9L	ENST00000439952.5	631	4	-24	-4858	0	128	multi-exon	FALSE	canonical	1	3704	junction_3	65610.98629548764	NA	1	NA	TRUE	NA	NA	NA	C	coding	1584	4755	447	5201	25.0	-1	True	AATAAA	-16
PB.11398.2	chr8	+	2374	14	novel_not_in_catalog	HSF1	novel	2105	13	NA	NA	-10	1	any annotated donor/acceptor	FALSE	canonical	1	5710	junction_1	445607.2590117098	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	593	1987	10.0	-24	False	TATAAA	-14
PB.110.1	chr1	+	2419	1	incomplete-splice_match	DDI2	ENST00000480945.5	10625	10	49122	4	14786	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	NA	False	AATAAA	-12
PB.11398.3	chr8	+	2406	15	novel_in_catalog	HSF1	novel	2105	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	639	junction_3	475594.77268674766	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	622	2016	10.0	-17	True	TATAAA	-17
PB.10911.3	chr7	+	2858	6	novel_not_in_catalog	ZNF212	novel	2810	5	NA	NA	0	-19	any annotated donor/acceptor	FALSE	canonical	1	1263	junction_1	59956.98457594411	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	205	1683	75.0	0	True	AATAAA	-14
PB.2094.2	chr11	-	4832	3	novel_in_catalog	RBM4B	novel	2339	3	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	173100	junction_2	11148.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	129	1208	20.0	-68	True	AATAAA	-16
PB.2094.3	chr11	-	4219	4	novel_in_catalog	RBM4B	novel	2339	3	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	23753	junction_1	76203.64344891187	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	128	1207	25.0	-67	True	AATAAA	-15
PB.3444.8	chr14	-	5646	13	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	106912.98173550483	NA	7	1	TRUE	NA	NA	NA	C	coding	454	1365	1482	2846	25.0	109	True	ATTAAA	-13
PB.2094.1	chr11	-	1799	4	full-splice_match	RBM4B	ENST00000310046.8	1840	4	45	-4	1	4	multi-exon	FALSE	canonical	1	78657	junction_1	50601.47778474459	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	126	1205	10.0	-65	True	AATAAA	-22
PB.2094.6	chr11	-	2006	5	novel_in_catalog	RBM4B	novel	2339	3	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	1	10743	junction_1	83622.51764140745	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	119	1198	25.0	-58	True	AATAAA	-14
PB.2094.7	chr11	-	2903	3	incomplete-splice_match	RBM4B	ENST00000310046.8	1840	4	43	1930	-1	-1022	3prime_fragment	FALSE	canonical	1	173100	junction_2	11148.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	128	1207	90.0	-67	True	NA	NA
PB.6830.6	chr2	+	2962	14	full-splice_match	DCAF17	ENST00000375255.7	5828	14	-22	2888	12	6	multi-exon	FALSE	canonical	1	35443	junction_8	25715.235683086525	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	350	1912	25.0	1	True	AATAAA	-19
PB.2094.5	chr11	-	2096	5	novel_in_catalog	RBM4B	novel	2339	3	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	23753	junction_1	80226.57925642536	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	126	1205	25.0	-65	True	AATAAA	-15
PB.3444.2	chr14	-	6117	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	10	-524	10	524	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	5	NA	TRUE	NA	NA	NA	C	coding	872	2619	175	2793	65.0	41	True	NA	NA
PB.3444.3	chr14	-	5526	12	full-splice_match	DDHD1	ENST00000357758.3	5603	12	78	-1	0	1	multi-exon	FALSE	canonical	1	71431	junction_10	94905.65759725256	NA	2	NA	TRUE	NA	NA	NA	C	coding	872	2619	107	2725	20.0	109	True	ATTAAA	-14
PB.2094.8	chr11	-	2276	2	full-splice_match	RBM4B	ENST00000531036.2	1646	2	1	-631	1	631	multi-exon	FALSE	canonical	1	173100	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	126	581	30.0	-65	True	NA	NA
PB.2094.9	chr11	-	1989	2	full-splice_match	RBM4B	ENST00000531036.2	1646	2	10	-353	10	353	multi-exon	FALSE	canonical	1	173100	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	117	572	20.0	-56	True	NA	NA
PB.3444.6	chr14	-	5634	13	full-splice_match	DDHD1	ENST00000323669.9	5503	13	-131	0	-25	0	multi-exon	FALSE	canonical	1	70289	junction_1	96433.06224253289	NA	5	NA	TRUE	NA	NA	NA	C	coding	900	2703	132	2834	25.0	84	True	ATTAAA	-13
PB.3444.7	chr14	-	5749	14	novel_in_catalog	DDHD1	novel	12339	14	NA	NA	-41	0	intron_retention	FALSE	canonical	1	4041	junction_11	107040.9195405329	NA	2	NA	TRUE	NA	NA	NA	C	coding	907	2724	226	2949	25.0	-10	True	ATTAAA	-13
PB.100.1	chr1	+	4108	19	full-splice_match	MFN2	ENST00000235329.9	4539	19	117	314	-6	-314	multi-exon	FALSE	canonical	1	336710	junction_1	141043.34889719475	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	206	2479	60.0	-17	True	NA	NA
PB.3444.5	chr14	-	5823	14	novel_not_in_catalog	DDHD1	novel	12339	14	NA	NA	-34	0	intron_retention	FALSE	canonical	1	7308	junction_12	105195.78739546312	NA	2	NA	TRUE	NA	NA	NA	C	coding	934	2805	219	3023	25.0	-3	True	ATTAAA	-13
PB.2805.8	chr12	+	1134	6	full-splice_match	MRPL42	ENST00000552217.5	920	6	-2	-212	-2	212	multi-exon	FALSE	canonical	1	194017	junction_1	268639.3698366642	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	139	567	30.0	-3	True	AATAAA	-20
PB.2805.9	chr12	+	4196	6	full-splice_match	MRPL42	ENST00000552217.5	920	6	-2	-3274	-2	1986	multi-exon	FALSE	canonical	1	194017	junction_1	268639.3698366642	NA	4	NA	TRUE	NA	NA	NA	C	coding	142	429	139	567	30.0	-3	True	NA	NA
PB.3892.19	chr15	+	4498	19	novel_not_in_catalog	TCF12	novel	4786	21	NA	NA	304	-2	any annotated donor/acceptor	FALSE	canonical	1	7446	junction_13	138894.97328936157	NA	2	NA	TRUE	NA	NA	NA	C	coding	681	2046	94	2139	50.0	-96	False	AATAAA	-16
PB.2805.4	chr12	+	4068	7	novel_not_in_catalog	MRPL42	novel	15582	6	NA	NA	-12	-3284	intron_retention	FALSE	non_canonical	0	0	junction_6	358944.887565394	NA	2	NA	TRUE	NA	NA	NA	C	coding	142	429	149	577	20.0	-13	False	NA	NA
PB.3892.16	chr15	+	4857	20	novel_not_in_catalog	TCF12	novel	4786	21	NA	NA	-127	0	any annotated donor/acceptor	FALSE	canonical	1	1655	junction_1	136570.46571305353	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	440	2488	40.0	-527	False	AATAAA	-26
PB.2805.6	chr12	+	4785	7	novel_not_in_catalog	MRPL42	novel	15582	6	NA	NA	-5	-5810	intron_retention	FALSE	non_canonical	0	0	junction_6	329779.9701988181	NA	5	NA	TRUE	NA	NA	NA	C	coding	142	429	139	567	15.0	-6	True	NA	NA
PB.3892.14	chr15	+	2191	19	incomplete-splice_match	TCF12	ENST00000267811.9	6061	20	51	7377	1	0	3prime_fragment	FALSE	canonical	1	296234	junction_6	98339.73830678478	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1938	254	2191	65.0	1	True	NA	NA
PB.3892.13	chr15	+	4020	12	incomplete-splice_match	TCF12	ENST00000333725.9	4719	21	-22	51673	-3	5583	3prime_fragment	FALSE	canonical	1	296234	junction_6	85370.96505707815	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	258	1325	90.0	-3	True	NA	NA
PB.2805.1	chr12	+	2130	6	full-splice_match	MRPL42	ENST00000552217.5	920	6	-21	-1189	7	-99	multi-exon	FALSE	canonical	1	194017	junction_1	268639.3698366642	NA	0	NA	TRUE	NA	NA	NA	C	coding	142	429	158	586	60.0	0	True	TATAAA	-15
PB.2805.2	chr12	+	4097	7	novel_not_in_catalog	MRPL42	novel	15582	6	NA	NA	8	-3282	intron_retention	FALSE	non_canonical	0	0	junction_6	329779.9701988181	NA	13	1	TRUE	NA	NA	NA	C	coding	142	429	154	582	20.0	1	True	NA	NA
PB.3892.10	chr15	+	6112	21	full-splice_match	TCF12	ENST00000333725.9	4719	21	-50	-1343	19	-2	multi-exon	FALSE	canonical	1	82047	junction_15	140878.27590777614	NA	4	NA	TRUE	NA	NA	NA	C	coding	706	2121	286	2406	25.0	-31	True	AATAAA	-14
PB.1845.1	chr11	+	2784	15	full-splice_match	GTF2H1	ENST00000265963.8	2982	15	-29	227	0	4	multi-exon	FALSE	canonical	1	115329	junction_3	99836.90087523975	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	190	1836	15.0	0	True	AATAAA	-18
PB.1436.6	chr10	-	2187	10	incomplete-splice_match	DNA2	ENST00000399179.6	3207	22	152	21586	-54	279	internal_fragment	FALSE	canonical	1	80997	junction_9	18101.18281040779	NA	0	NA	TRUE	NA	NA	NA	B	coding	549	1650	106	1755	40.0	-39	True	NA	NA
PB.1845.3	chr11	+	2189	15	full-splice_match	GTF2H1	ENST00000265963.8	2982	15	-29	822	0	-39	multi-exon	FALSE	canonical	1	115329	junction_3	99836.90087523975	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	190	1836	55.0	0	True	NA	NA
PB.1845.2	chr11	+	3023	15	full-splice_match	GTF2H1	ENST00000265963.8	2982	15	-42	1	-3	-1	multi-exon	FALSE	canonical	1	115329	junction_3	99836.90087523975	NA	2	NA	TRUE	NA	NA	NA	C	coding	548	1647	203	1849	25.0	7	True	AGTAAA	-28
PB.1845.5	chr11	+	2175	4	novel_in_catalog	GTF2H1	novel	2707	16	NA	NA	0	-978	combination_of_known_junctions	FALSE	canonical	1	3495	junction_3	2421.212414381596	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-22
PB.1845.4	chr11	+	3299	11	incomplete-splice_match	GTF2H1	ENST00000418116.6	1822	14	10	6474	0	-3806	3prime_fragment	FALSE	canonical	1	115329	junction_3	101180.84466261388	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	190	1536	25.0	0	True	NA	NA
PB.1845.7	chr11	+	3227	16	full-splice_match	GTF2H1	ENST00000453096.6	2707	16	262	-782	0	-1	multi-exon	FALSE	canonical	1	8282	junction_1	132941.31720334353	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	407	2053	25.0	10	True	AGTAAA	-28
PB.1845.6	chr11	+	2922	16	novel_in_catalog	GTF2H1	novel	2707	16	NA	NA	0	81	combination_of_known_junctions	FALSE	canonical	1	9042	junction_1	132679.9371502548	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	251	1897	85.0	0	True	NA	NA
PB.1845.9	chr11	+	3070	16	novel_in_catalog	GTF2H1	novel	2707	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	9042	junction_1	132679.9371502548	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	251	1897	20.0	0	True	AGTAAA	-27
PB.1845.8	chr11	+	2995	16	full-splice_match	GTF2H1	ENST00000453096.6	2707	16	267	-555	-5	3	multi-exon	FALSE	canonical	1	8282	junction_1	132941.31720334353	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	402	2048	15.0	-5	True	AATAAA	-17
PB.9033.28	chr4	+	3126	23	novel_not_in_catalog	TMEM131L	novel	5017	35	NA	NA	23380	560	any annotated donor/acceptor	FALSE	canonical	1	11847	junction_1	87890.88422489962	NA	1	NA	TRUE	NA	NA	NA	C	coding	905	2715	412	3126	65.0	-146	False	CATAAA	-44
PB.11398.8	chr8	+	2651	11	novel_in_catalog	HSF1	novel	2105	13	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	392078	junction_8	329744.73844003945	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	1042	2154	15.0	-10	True	TATAAA	-12
PB.1313.9	chr10	+	3053	6	full-splice_match	PTER	ENST00000378000.5	3777	6	-12	736	-12	-736	multi-exon	FALSE	canonical	1	18176	junction_2	48065.42231833608	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	259	1308	80.0	0	True	NA	NA
PB.1313.8	chr10	+	3026	5	novel_in_catalog	PTER	novel	1203	5	NA	NA	-13	-284	no_combination_of_known_junctions	FALSE	canonical	1	6135	junction_2	56714.95521906017	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	227	829	25.0	-1	True	NA	NA
PB.11442.12	chr9	+	6661	26	full-splice_match	RIC1	ENST00000414202.6	6774	26	-10	123	-10	-118	multi-exon	FALSE	canonical	1	105231	junction_7	33245.95987258603	NA	45	2	TRUE	NA	NA	NA	C	coding	1423	4272	202	4473	40.0	2	True	AATAAA	-13
PB.12293.18	chrX	-	1814	2	novel_not_in_catalog	RBMX	novel	2004	8	NA	NA	0	458	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.11442.10	chr9	+	6144	27	novel_not_in_catalog	RIC1	novel	4127	22	NA	NA	-12	1700	any annotated donor/acceptor	FALSE	canonical	1	104	junction_22	56271.91315407031	NA	2	1	TRUE	NA	NA	NA	C	coding	1148	3447	204	3650	40.0	0	True	NA	NA
PB.2956.14	chr12	+	3124	17	novel_in_catalog	RNF10	novel	321	2	NA	NA	0	1	intron_retention	FALSE	canonical	1	30315	junction_1	626377.5570924531	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	711	2675	25.0	0	True	AATAAA	-12
PB.1313.3	chr10	+	2515	6	full-splice_match	PTER	ENST00000378000.5	3777	6	-44	1306	-3	1175	multi-exon	FALSE	canonical	1	18176	junction_2	48065.42231833608	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	291	1340	30.0	-70	False	AATAAA	-15
PB.12293.14	chrX	-	3500	9	novel_in_catalog	RBMX	novel	837	3	NA	NA	-9	-499	intron_retention	FALSE	canonical	1	8224	junction_6	164847.07208116975	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	410	883	30.0	-10	True	NA	NA
PB.1313.1	chr10	+	2245	7	novel_not_in_catalog	PTER	novel	1203	5	NA	NA	-25	804	any annotated donor/acceptor	FALSE	canonical	1	11743	junction_2	53798.840197122794	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	392	1441	75.0	-92	False	NA	NA
PB.12293.16	chrX	-	2047	9	full-splice_match	RBMX	ENST00000320676.11	2012	9	-47	12	-8	-12	multi-exon	FALSE	canonical	1	87723	junction_6	121589.22704438087	NA	18	NA	TRUE	NA	NA	NA	C	coding	391	1176	203	1378	45.0	6	False	AATAAA	-7
PB.1313.7	chr10	+	2776	6	full-splice_match	PTER	ENST00000378000.5	3777	6	-24	1025	17	-1025	multi-exon	FALSE	canonical	1	18176	junction_2	48065.42231833608	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	271	1320	90.0	-50	False	NA	NA
PB.1313.6	chr10	+	2650	5	full-splice_match	PTER	ENST00000535784.6	1203	5	9	-1456	9	-1025	multi-exon	FALSE	canonical	1	28493	junction_1	47029.25042194485	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	145	1194	90.0	-58	False	NA	NA
PB.12293.13	chrX	-	2207	9	novel_in_catalog	RBMX	novel	837	3	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	5157	junction_4	159410.7240294999	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	156	956	15.0	-1	True	AATAAA	-13
PB.1313.4	chr10	+	3287	5	full-splice_match	PTER	ENST00000535784.6	1203	5	67	-2151	26	-330	multi-exon	FALSE	canonical	1	28493	junction_1	47029.25042194485	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	87	1136	30.0	0	True	AATAAA	-19
PB.2819.2	chr12	+	1307	1	antisense	novelGene_CDK17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2819.1	chr12	+	2881	1	antisense	novelGene_CDK17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2956.16	chr12	+	2571	14	novel_in_catalog	RNF10	novel	321	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	6936	junction_7	498033.98531211686	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	457	2355	30.0	0	True	AATAAA	-11
PB.11421.7	chr9	-	2398	14	novel_in_catalog	CBWD1	novel	1706	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2111	junction_13	144703.46864834963	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	1524	2342	30.0	NA	False	AATAAA	-18
PB.6937.14	chr2	+	4067	11	novel_in_catalog	BZW1	novel	578	6	NA	NA	-2	605	intron_retention	FALSE	canonical	1	446	junction_8	895972.377122247	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	81	1214	20.0	11	True	AATAAA	-24
PB.2213.3	chr11	-	1946	8	novel_in_catalog	CTSC	novel	1921	7	NA	NA	0	-13	no_combination_of_known_junctions	FALSE	canonical	1	5715	junction_5	485876.2378006001	NA	1	1	TRUE	NA	NA	NA	C	coding	342	1029	517	1545	50.0	-5	True	AATAAA	-6
PB.991.4	chr1	+	1875	7	full-splice_match	RNF2	ENST00000367510.7	3606	7	179	1552	7	-1	multi-exon	FALSE	canonical	1	78096	junction_5	82980.27115659614	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	110	1120	15.0	-15	True	ATTAAA	-28
PB.6483.1	chr2	+	3508	1	full-splice_match	AC010733.2	ENST00000589496.2	5702	1	-1262	3456	-1262	-3456	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	1038	False	NA	NA
PB.7913.1	chr3	-	3556	20	incomplete-splice_match	SRGAP3	ENST00000383836.7	8656	22	-294	12039	12	-2	3prime_fragment	TRUE	canonical	1	27654	junction_9	13686.15732852186	NA	0	NA	TRUE	NA	NA	NA	A	coding	853	2562	723	3284	35.0	-7	True	TTTAAA	-25
PB.2213.2	chr11	-	1843	7	full-splice_match	CTSC	ENST00000227266.9	1921	7	22	56	-4	-56	multi-exon	FALSE	canonical	1	1082009	junction_5	139946.89474394286	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	94	1485	50.0	0	True	AAGAAA	-19
PB.2213.1	chr11	-	2117	7	full-splice_match	CTSC	ENST00000227266.9	1921	7	51	-247	0	247	multi-exon	FALSE	canonical	1	1082009	junction_5	139946.89474394286	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	65	1456	25.0	-1	True	AAGAAA	-22
PB.11515.1	chr9	+	2351	4	full-splice_match	DNAJB5	ENST00000312316.9	2391	4	40	0	-11	0	multi-exon	FALSE	canonical	1	91641	junction_1	78272.21036158931	NA	1	NA	TRUE	NA	NA	NA	A	coding	348	1047	133	1179	40.0	-11	True	AATAAA	-18
PB.2772.15	chr12	-	2901	22	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	-2	-871	combination_of_known_junctions	FALSE	canonical	1	161349	junction_20	113679.11722753945	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	572	2899	65.0	-4	True	AGTAAA	-10
PB.2772.14	chr12	-	3242	24	full-splice_match	OSBPL8	ENST00000261183.7	7239	24	6	3991	2	45	multi-exon	FALSE	canonical	1	81870	junction_21	133303.310076394	NA	0	NA	TRUE	NA	NA	NA	C	coding	889	2670	475	3144	65.0	4	True	ATTAAA	-15
PB.2772.17	chr12	-	2677	23	incomplete-splice_match	OSBPL8	ENST00000261183.7	7239	24	259	4907	-15	-871	3prime_fragment	FALSE	canonical	1	81870	junction_20	132982.89586146965	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2454	222	2675	65.0	-15	True	AGTAAA	-10
PB.2772.16	chr12	-	2886	23	novel_not_in_catalog	OSBPL8	novel	7047	26	NA	NA	-8	-871	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_21	141994.4387506336	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	557	2884	65.0	-4	True	AGTAAA	-10
PB.2772.11	chr12	-	3685	23	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	-3	516	combination_of_known_junctions	FALSE	canonical	1	161349	junction_21	114151.95203897239	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	573	3116	45.0	-5	True	AAAAAG	-15
PB.4716.18	chr17	+	2941	7	full-splice_match	XAF1	ENST00000361842.7	3623	7	207	475	1	-475	multi-exon	FALSE	canonical	1	84748	junction_4	51900.45429366576	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	33	938	65.0	1	True	NA	NA
PB.2772.13	chr12	-	3214	23	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	-2	46	combination_of_known_junctions	FALSE	canonical	1	161349	junction_21	114151.95203897239	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	572	3115	65.0	-4	True	ATTAAA	-16
PB.2772.12	chr12	-	3387	23	novel_in_catalog	OSBPL8	novel	7047	26	NA	NA	3	228	combination_of_known_junctions	FALSE	canonical	1	161349	junction_21	114151.95203897239	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	563	3106	20.0	5	True	AATAAA	-16
PB.4716.15	chr17	+	3355	6	full-splice_match	XAF1	ENST00000346752.8	1584	6	209	-1980	1	-4	multi-exon	FALSE	canonical	1	11133	junction_2	81090.09677636351	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	33	881	25.0	1	True	AATAAA	-12
PB.4716.14	chr17	+	3564	8	novel_in_catalog	XAF1	novel	818	3	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	48289	junction_4	64282.557929179886	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	33	527	25.0	1	True	AATAAA	-12
PB.4716.17	chr17	+	2961	8	novel_in_catalog	XAF1	novel	818	3	NA	NA	1	-607	combination_of_known_junctions	FALSE	canonical	1	48289	junction_4	64282.557929179886	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	33	527	90.0	1	True	NA	NA
PB.4716.16	chr17	+	3038	7	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	1	-477	any annotated donor/acceptor	FALSE	canonical	1	7994	junction_4	92273.44266258605	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	33	470	65.0	1	True	NA	NA
PB.4716.11	chr17	+	2956	7	novel_in_catalog	XAF1	novel	818	3	NA	NA	0	-607	combination_of_known_junctions	FALSE	canonical	1	8253	junction_1	72579.22520636022	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	315	1085	90.0	0	True	NA	NA
PB.4716.10	chr17	+	3553	8	novel_not_in_catalog	XAF1	novel	818	3	NA	NA	-3	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	77431.81829539206	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	37	531	25.0	-3	True	AATAAA	-12
PB.4716.13	chr17	+	5008	7	novel_in_catalog	XAF1	novel	818	3	NA	NA	0	2	intron_retention	FALSE	canonical	1	48289	junction_3	67473.34018130584	NA	0	NA	TRUE	NA	NA	NA	C	coding	184	555	1974	2528	5.0	0	True	AATAAA	-18
PB.4716.12	chr17	+	1985	8	novel_in_catalog	XAF1	novel	818	3	NA	NA	0	-45	combination_of_known_junctions	FALSE	canonical	1	48289	junction_4	64282.557929179886	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	34	528	65.0	0	True	NA	NA
PB.1408.1	chr10	+	3705	29	incomplete-splice_match	WASHC2A	ENST00000282633.9	4272	31	-82	3237	-9	-3237	3prime_fragment	FALSE	canonical	1	2302	junction_9	71096.6803115049	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3576	128	3703	50.0	-75	False	NA	NA
PB.1851.8	chr11	-	2952	6	full-splice_match	SPTY2D1	ENST00000336349.5	5754	6	126	2676	22	-2676	multi-exon	FALSE	canonical	1	139004	junction_5	43176.4668753709	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	111	2168	55.0	4	True	NA	NA
PB.1408.3	chr10	+	6489	28	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	8	0	intron_retention	FALSE	canonical	1	91	junction_17	72531.16803267277	NA	3	NA	TRUE	NA	NA	NA	C	coding	531	1596	4333	5928	25.0	-58	False	NA	NA
PB.1408.4	chr10	+	3595	28	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	-5	-3237	no_combination_of_known_junctions	FALSE	canonical	1	2302	junction_9	71613.21231621239	NA	5	1	TRUE	NA	NA	NA	C	coding	1163	3489	105	3593	50.0	-52	False	NA	NA
PB.1408.5	chr10	+	1926	19	incomplete-splice_match	WASHC2A	ENST00000282633.9	4272	31	-54	26723	0	14918	3prime_fragment	FALSE	canonical	1	2302	junction_9	85346.14627910533	NA	2	1	TRUE	NA	NA	NA	C	coding	609	1827	100	1926	45.0	-47	False	NA	NA
PB.1408.6	chr10	+	4261	30	full-splice_match	WASHC2A	ENST00000351071.11	4623	30	3	359	3	1	multi-exon	FALSE	canonical	1	2302	junction_9	70202.19984267933	NA	0	NA	TRUE	NA	NA	NA	C	coding	1320	3963	97	4059	10.0	-44	False	AATAAA	-14
PB.1408.7	chr10	+	4236	30	novel_in_catalog	WASHC2A	novel	4417	28	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	2302	junction_9	69421.16862511788	NA	0	NA	TRUE	NA	NA	NA	C	coding	1312	3939	97	4035	5.0	-44	False	AATAAA	-13
PB.1851.2	chr11	-	5614	6	full-splice_match	SPTY2D1	ENST00000336349.5	5754	6	139	1	35	-1	multi-exon	FALSE	canonical	1	139004	junction_5	43176.4668753709	NA	3	NA	TRUE	NA	NA	NA	C	coding	685	2058	98	2155	10.0	458	False	ATTAAA	-15
PB.1851.3	chr11	-	5589	6	novel_in_catalog	SPTY2D1	novel	5754	6	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	1	4728	junction_5	95777.23975475592	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	325	2130	10.0	-9	True	ATTAAA	-15
PB.10187.3	chr6	-	2953	13	full-splice_match	CEP85L	ENST00000368491.7	7673	13	265	4455	231	-4446	multi-exon	FALSE	canonical	1	36899	junction_12	15449.34369875375	NA	0	NA	TRUE	NA	NA	NA	C	coding	805	2418	358	2775	80.0	-1	True	GGGGCT	-14
PB.1851.6	chr11	-	5371	6	full-splice_match	SPTY2D1	ENST00000336349.5	5754	6	80	303	-24	-303	multi-exon	FALSE	canonical	1	139004	junction_5	43176.4668753709	NA	2	NA	TRUE	NA	NA	NA	C	coding	685	2058	157	2214	15.0	-2	True	AATAAA	-13
PB.1851.7	chr11	-	4528	6	full-splice_match	SPTY2D1	ENST00000336349.5	5754	6	81	1145	-23	-1145	multi-exon	FALSE	canonical	1	139004	junction_5	43176.4668753709	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	156	2213	15.0	-1	True	ATTAAA	-18
PB.1851.4	chr11	-	4885	6	novel_not_in_catalog	SPTY2D1	novel	5754	6	NA	NA	27	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	98847.93920846302	NA	2	NA	TRUE	NA	NA	NA	C	coding	342	1029	106	1134	15.0	9	True	ATTAAA	-12
PB.2956.18	chr12	+	3039	18	novel_not_in_catalog	RNF10	novel	321	2	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	469146.89334655064	NA	1	NA	TRUE	NA	NA	NA	C	coding	811	2436	388	2823	30.0	1	True	AATAAA	-11
PB.11501.2	chr9	-	2162	7	full-splice_match	BAG1	ENST00000379704.7	1128	7	-173	-861	-24	860	multi-exon	FALSE	canonical	1	1046680	junction_5	199435.08072441907	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	284	1108	100.0	942	False	NA	NA
PB.622.1	chr1	+	2211	3	full-splice_match	SLC16A1-AS1	ENST00000428411.5	8757	3	-75	6621	-29	411	multi-exon	FALSE	canonical	1	23334	junction_1	169.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-75	True	NA	NA
PB.11501.1	chr9	-	2334	7	full-splice_match	BAG1	ENST00000379704.7	1128	7	-174	-1032	-25	1031	multi-exon	TRUE	canonical	1	1046680	junction_5	199435.08072441907	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	285	1109	70.0	941	False	NA	NA
PB.2213.9	chr11	-	821	4	full-splice_match	CTSC	ENST00000524463.5	6125	4	25	5279	0	-4	multi-exon	FALSE	canonical	1	856131	junction_1	228596.47899640878	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	65	478	15.0	-1	True	AATAAA	-14
PB.11501.4	chr9	-	1415	8	full-splice_match	BAG1	ENST00000379707.7	1396	8	1	-20	1	-3	multi-exon	FALSE	canonical	1	55346	junction_6	600459.1335528002	NA	1	1	TRUE	NA	NA	NA	C	coding	204	615	259	873	0.0	-13	True	AGTAAA	-15
PB.859.11	chr1	-	2423	1	novel_in_catalog	CD48	novel	1126	4	NA	NA	12	-25850	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	96	291	29	319	65.0	-1	True	NA	NA
PB.6009.1	chr19	+	3162	7	full-splice_match	ITPKC	ENST00000263370.2	3385	7	221	2	221	-2	multi-exon	FALSE	canonical	1	132840	junction_1	30293.853212693535	NA	0	NA	TRUE	NA	NA	NA	A	coding	239	720	1145	1864	25.0	212	False	AATAAA	-17
PB.6699.5	chr2	-	2871	8	incomplete-splice_match	CKAP2L	ENST00000302450.10	4533	9	66	3365	6	-2105	3prime_fragment	FALSE	canonical	1	107813	junction_1	25093.690510336884	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	14	2029	70.0	-3	True	NA	NA
PB.2441.1	chr12	-	2268	13	full-splice_match	LPCAT3	ENST00000261407.8	2268	13	2	-2	2	2	multi-exon	FALSE	canonical	1	480262	junction_4	35148.5737962399	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	85	1548	20.0	331	False	GATAAA	-28
PB.2441.2	chr12	-	2377	12	novel_in_catalog	LPCAT3	novel	2902	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	480262	junction_3	36384.386337280666	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	93	1586	25.0	323	False	GATAAA	-25
PB.2441.3	chr12	-	2154	5	incomplete-splice_match	LPCAT3	ENST00000536797.5	1412	8	-55	2204	-19	-449	3prime_fragment	FALSE	canonical	1	503521	junction_4	30991.129008959968	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	106	642	95.0	310	False	NA	NA
PB.11343.10	chr8	-	1734	12	full-splice_match	FAM49B	ENST00000519824.6	3798	12	185	1879	47	-2	multi-exon	FALSE	canonical	1	154438	junction_11	256611.83436920942	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	90	1064	15.0	163	False	AATAAA	-20
PB.3345.4	chr14	+	2528	19	novel_in_catalog	REC8	novel	2405	20	NA	NA	35	1	intron_retention	FALSE	canonical	1	40234	junction_9	59991.41585839131	NA	0	NA	TRUE	NA	NA	NA	C	coding	316	951	393	1343	25.0	-22	True	AAAACA	-18
PB.3345.5	chr14	+	2147	20	novel_in_catalog	REC8	novel	2405	20	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	7449	junction_1	71389.20366577317	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	346	1989	30.0	0	True	AAAACA	-16
PB.3345.1	chr14	+	2346	19	full-splice_match	REC8	ENST00000611366.4	2331	19	-10	-5	0	2	multi-exon	FALSE	canonical	1	40234	junction_8	59503.33530801259	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	539	2182	30.0	0	True	AAAACA	-22
PB.3345.2	chr14	+	2645	18	novel_in_catalog	REC8	novel	2405	20	NA	NA	17	0	intron_retention	FALSE	canonical	1	40234	junction_8	56914.787485859546	NA	2	NA	TRUE	NA	NA	NA	C	coding	316	951	512	1462	30.0	-40	True	AAAACA	-16
PB.3345.3	chr14	+	2212	20	full-splice_match	REC8	ENST00000620473.4	2405	20	191	2	19	1	multi-exon	FALSE	canonical	1	40234	junction_9	61763.375663285275	NA	0	NA	TRUE	NA	NA	NA	C	coding	547	1644	409	2052	25.0	-38	True	AAAACA	-18
PB.6937.17	chr2	+	2866	12	full-splice_match	BZW1	ENST00000452790.6	1473	12	26	-1419	26	424	multi-exon	FALSE	canonical	1	396	junction_10	858745.0072147327	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	27	1382	30.0	-4	True	AATAAA	-27
PB.8489.40	chr3	-	2990	4	full-splice_match	CCNL1	ENST00000295925.5	549	4	-53	-2388	8	-1593	multi-exon	FALSE	canonical	1	340686	junction_1	190457.09621737793	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	54	572	25.0	-1	True	AAGAAA	-18
PB.8191.1	chr3	+	6696	22	full-splice_match	APPL1	ENST00000288266.7	6058	22	-18	-620	-7	620	multi-exon	FALSE	canonical	1	166360	junction_1	74868.2144823069	NA	3	NA	TRUE	NA	NA	NA	C	coding	709	2130	166	2295	75.0	-47	True	TATAAA	-12
PB.11749.2	chr9	-	2471	8	novel_in_catalog	ASTN2	novel	4747	23	NA	NA	2	464	intron_retention	FALSE	canonical	1	33289	junction_7	36472.831028935856	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	206	1381	70.0	-3	True	NA	NA
PB.6298.2	chr2	-	7279	30	novel_not_in_catalog	KIDINS220	novel	8735	30	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	643	junction_5	104365.7489107321	NA	18	3	TRUE	NA	NA	NA	B	coding	1208	3627	169	3795	25.0	1	True	AATAAA	-13
PB.3190.4	chr13	+	2624	10	novel_in_catalog	BORA	novel	2936	12	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	15736	junction_2	53306.1272680823	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	120	1646	15.0	0	True	AATAAA	-14
PB.12348.5	chrX	+	2177	8	novel_in_catalog	TAZ	novel	1322	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	159580	junction_4	129984.5480243788	NA	1	NA	TRUE	NA	NA	NA	C	coding	154	465	305	769	20.0	-6	True	CATAAA	-22
PB.12348.6	chrX	+	2095	9	novel_in_catalog	TAZ	novel	1322	5	NA	NA	-1	1	intron_retention	FALSE	canonical	1	126176	junction_5	138307.7819271547	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	305	898	20.0	-6	True	CATAAA	-21
PB.12348.7	chrX	+	1901	11	full-splice_match	TAZ	ENST00000601016.5	1889	11	-16	4	-1	0	multi-exon	FALSE	canonical	1	103193	junction_5	146361.78627705388	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	305	1183	20.0	-6	True	CATAAA	-22
PB.12348.1	chrX	+	2381	9	novel_in_catalog	TAZ	novel	1322	5	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	16369	junction_3	174298.67245689043	NA	6	NA	TRUE	NA	NA	NA	C	coding	108	327	1340	1666	20.0	-8815	False	CATAAA	-19
PB.12348.2	chrX	+	1826	10	full-splice_match	TAZ	ENST00000612460.4	1793	10	-31	-2	1	0	multi-exon	FALSE	canonical	1	126176	junction_5	138141.35517632152	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	320	1108	20.0	-21	True	CATAAA	-22
PB.12348.3	chrX	+	2409	7	novel_in_catalog	TAZ	novel	1322	5	NA	NA	-4	0	intron_retention	FALSE	canonical	1	159580	junction_3	132762.51127451856	NA	1	NA	TRUE	NA	NA	NA	C	coding	108	327	1365	1691	20.0	-9	True	CATAAA	-22
PB.3190.8	chr13	+	2758	12	full-splice_match	BORA	ENST00000390667.9	2936	12	178	0	-1	0	multi-exon	FALSE	canonical	1	65913	junction_2	43150.150047334	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1680	97	1776	5.0	4	True	AATAAA	-18
PB.12348.9	chrX	+	3380	6	novel_in_catalog	TAZ	novel	1322	5	NA	NA	-1	0	intron_retention	FALSE	canonical	1	159580	junction_2	143285.7039009824	NA	1	NA	TRUE	NA	NA	NA	C	coding	163	492	287	778	20.0	12	True	CATAAA	-22
PB.3894.11	chr15	+	3467	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	85	647	0	-644	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	130	1236	20.0	0	True	GATAAA	-21
PB.3894.10	chr15	+	2369	4	full-splice_match	POLR2M	ENST00000299638.7	4199	4	82	1748	-1	927	multi-exon	FALSE	canonical	1	18215	junction_3	13365.570304164186	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	133	1239	30.0	-3	True	AATAAA	-21
PB.3359.1	chr14	-	4469	3	full-splice_match	CBLN3	ENST00000555436.1	718	3	-32	-3719	-32	2646	multi-exon	TRUE	canonical	1	4548	junction_2	78562.5	NA	13	NA	TRUE	NA	NA	NA	C	coding	154	465	102	566	5.0	-1319	False	AATAAA	-12
PB.8348.3	chr3	+	2129	6	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	221	30202	-20	5012	3prime_fragment	FALSE	canonical	1	220702	junction_1	57537.51669441426	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2082	46	2127	60.0	0	True	TTTAAA	-25
PB.8348.4	chr3	+	6770	17	full-splice_match	PARP14	ENST00000474629.6	7915	17	241	904	0	-889	multi-exon	FALSE	canonical	1	220702	junction_1	102087.50895119038	NA	1	NA	TRUE	NA	NA	NA	C	coding	1801	5406	26	5431	30.0	0	True	AATAAA	-28
PB.8348.5	chr3	+	5716	17	novel_not_in_catalog	PARP14	novel	7915	17	NA	NA	-28	-2130	any annotated donor/acceptor	FALSE	canonical	1	4964	junction_9	133144.40158607814	NA	0	NA	TRUE	NA	NA	NA	C	coding	1209	3630	54	3683	35.0	-8	True	AAAACA	-40
PB.8348.6	chr3	+	5388	17	full-splice_match	PARP14	ENST00000474629.6	7915	17	240	2287	-1	-2272	multi-exon	FALSE	canonical	1	220702	junction_1	102087.50895119038	NA	1	NA	TRUE	NA	NA	NA	C	coding	1787	5361	27	5387	40.0	-1	True	NA	NA
PB.8348.7	chr3	+	1439	6	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	199	30914	-42	4300	3prime_fragment	FALSE	canonical	1	220702	junction_1	57537.51669441426	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1371	68	1438	65.0	-22	True	AATAGA	-12
PB.8348.8	chr3	+	4310	14	incomplete-splice_match	PARP14	ENST00000474629.6	7915	17	200	12445	-41	-2573	3prime_fragment	TRUE	canonical	1	220702	junction_1	76526.06155031348	NA	0	NA	TRUE	NA	NA	NA	C	coding	1414	4242	67	4308	30.0	-21	True	NA	NA
PB.11274.29	chr8	-	2494	15	novel_in_catalog	PABPC1	novel	608	3	NA	NA	-1	-15	intron_retention	FALSE	canonical	1	160102	junction_1	2018798.6855433888	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	506	2416	55.0	-2	True	AAGAAA	-36
PB.995.8	chr1	-	4279	16	full-splice_match	IVNS1ABP	ENST00000459929.5	3657	16	0	-622	0	-5	multi-exon	FALSE	canonical	1	101344	junction_8	412805.49858111143	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	1363	2637	35.0	-1	True	AATAAA	-23
PB.7305.4	chr20	+	6349	6	novel_not_in_catalog	TTPAL	novel	6212	5	NA	NA	-9	-9	any annotated donor/acceptor	FALSE	canonical	1	1270	junction_1	43431.19183536183	NA	6	NA	TRUE	NA	NA	NA	C	coding	342	1029	268	1296	30.0	0	True	AATAAA	-9
PB.5498.12	chr18	+	2252	4	incomplete-splice_match	MALT1	ENST00000650355.1	1519	7	8221	-1314	432	718	5prime_fragment	FALSE	canonical	1	283786	junction_1	35300.32648574231	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	5	874	30.0	NA	False	NA	NA
PB.7305.6	chr20	+	2683	5	full-splice_match	TTPAL	ENST00000262605.8	6212	5	2	3527	0	-739	multi-exon	FALSE	canonical	1	63449	junction_1	15890.173929192846	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	120	1148	100.0	11	True	NA	NA
PB.5498.10	chr18	+	2729	17	full-splice_match	MALT1	ENST00000649217.1	4950	17	113	2108	12	-1	multi-exon	FALSE	canonical	1	105440	junction_1	77223.67122915988	NA	0	NA	TRUE	NA	NA	NA	C	coding	824	2475	67	2541	25.0	46	True	NA	NA
PB.7305.1	chr20	+	2603	5	full-splice_match	TTPAL	ENST00000456317.1	926	5	-55	-1622	-21	-740	multi-exon	FALSE	canonical	1	9928	junction_3	37649.82451735333	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	143	1069	100.0	-4108	False	NA	NA
PB.7305.2	chr20	+	2720	6	full-splice_match	TTPAL	ENST00000372904.7	6234	6	-14	3528	-12	-740	multi-exon	FALSE	canonical	1	6860	junction_1	41931.64426349151	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	158	1186	100.0	-3	True	NA	NA
PB.7305.3	chr20	+	6214	5	full-splice_match	TTPAL	ENST00000262605.8	6212	5	-11	9	-11	-9	multi-exon	FALSE	canonical	1	63449	junction_1	15890.173929192846	NA	2	NA	TRUE	NA	NA	NA	C	coding	342	1029	133	1161	30.0	-2	True	AATAAA	-9
PB.10655.1	chr7	+	2427	5	full-splice_match	STEAP2	ENST00000287908.7	6873	5	19	4427	19	-4390	multi-exon	FALSE	canonical	1	46724	junction_1	79889.61743712383	NA	1	NA	TRUE	NA	NA	NA	C	coding	490	1473	375	1847	60.0	1	True	NA	NA
PB.10655.3	chr7	+	4922	6	full-splice_match	STEAP2	ENST00000394621.6	7033	6	49	2062	-9	-1978	multi-exon	FALSE	canonical	1	37024	junction_1	78206.32371106572	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	476	1930	75.0	-5	True	NA	NA
PB.10655.2	chr7	+	4810	5	full-splice_match	STEAP2	ENST00000287908.7	6873	5	48	2015	-10	-1978	multi-exon	FALSE	canonical	1	46724	junction_1	79889.61743712383	NA	2	1	TRUE	NA	NA	NA	C	coding	490	1473	346	1818	75.0	-6	True	NA	NA
PB.10655.4	chr7	+	5392	2	incomplete-splice_match	STEAP2	ENST00000394626.5	2456	6	152	7387	23	3258	intron_retention	FALSE	canonical	1	46724	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	178	537	184	720	80.0	10	True	AAAAAG	-8
PB.3896.19	chr15	-	4686	16	novel_not_in_catalog	ADAM10	novel	11431	16	NA	NA	4	1473	any annotated donor/acceptor	FALSE	canonical	1	23	junction_2	234375.8851012526	NA	33	NA	TRUE	NA	NA	NA	C	coding	626	1881	476	2356	35.0	0	True	AATAAA	-12
PB.3896.18	chr15	-	4507	15	novel_in_catalog	ADAM10	novel	11431	16	NA	NA	-7	1474	combination_of_known_junctions	FALSE	canonical	1	1220	junction_12	285836.13135147834	NA	4	NA	TRUE	NA	NA	NA	C	coding	697	2094	265	2358	30.0	-11	True	AATAAA	-13
PB.11425.11	chr9	+	4562	4	full-splice_match	SMARCA2	ENST00000637806.1	7061	4	139	2360	139	759	multi-exon	FALSE	canonical	1	48585	junction_1	158208.4334716565	NA	12	NA	TRUE	NA	NA	NA	C	coding	270	813	139	951	35.0	4	True	AATAAA	-18
PB.11425.10	chr9	+	4804	4	full-splice_match	SMARCA2	ENST00000636559.1	6853	4	16	2033	16	1034	multi-exon	FALSE	canonical	1	152319	junction_1	109323.62918214688	NA	2	NA	TRUE	NA	NA	NA	C	coding	270	813	106	918	20.0	16	True	AATAAA	-42
PB.3896.11	chr15	-	4575	16	novel_in_catalog	ADAM10	novel	11431	16	NA	NA	-43	1476	no_combination_of_known_junctions	FALSE	canonical	1	8254	junction_1	230471.84642259456	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	301	2514	30.0	33	False	AATAAA	-15
PB.3896.10	chr15	-	4715	17	novel_not_in_catalog	ADAM10	novel	11431	16	NA	NA	6	1476	any annotated donor/acceptor	FALSE	canonical	1	357	junction_3	270960.6914144718	NA	29	3	TRUE	NA	NA	NA	C	coding	618	1857	474	2330	30.0	2	True	AATAAA	-15
PB.768.1	chr1	+	2254	4	antisense	novelGene_GATAD2B_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10772.1	chr7	-	2582	4	full-splice_match	ATXN7L1	ENST00000318724.8	1470	4	84	-1196	-21	1196	multi-exon	FALSE	canonical	1	21354	junction_1	23001.863320657787	NA	1	NA	TRUE	NA	NA	NA	A	coding	118	357	25	381	85.0	-8	True	GATAAA	-17
PB.8839.8	chr4	-	2722	7	novel_not_in_catalog	CCNI	novel	2772	7	NA	NA	0	3266	any annotated donor/acceptor	FALSE	canonical	1	5494	junction_1	1362762.8084127072	NA	1	NA	TRUE	NA	NA	NA	C	coding	239	720	562	1281	95.0	-1	True	NA	NA
PB.8839.3	chr4	-	2525	6	novel_in_catalog	CCNI	novel	2772	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	28483	junction_1	1329846.6199378935	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	562	1464	15.0	-1	True	AATAAA	-11
PB.8839.1	chr4	-	2758	7	full-splice_match	CCNI	ENST00000237654.8	2772	7	15	-1	-1	1	multi-exon	FALSE	canonical	1	1861986	junction_6	665618.3904683423	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	563	1696	15.0	-2	True	AATAAA	-12
PB.8839.7	chr4	-	1650	6	novel_in_catalog	CCNI	novel	2772	7	NA	NA	7	89	combination_of_known_junctions	FALSE	canonical	1	28483	junction_1	1329846.6199378935	NA	2	NA	TRUE	NA	NA	NA	C	coding	300	903	555	1457	85.0	6	True	CATAAA	-5
PB.8839.6	chr4	-	1772	6	novel_not_in_catalog	CCNI	novel	2772	7	NA	NA	-2	89	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	1290169.2191522163	NA	5	1	TRUE	NA	NA	NA	C	coding	189	570	1010	1579	85.0	-3	True	CATAAA	-5
PB.8839.5	chr4	-	1814	7	full-splice_match	CCNI	ENST00000237654.8	2772	7	19	939	3	18	multi-exon	FALSE	canonical	1	1861986	junction_6	665618.3904683423	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	559	1692	70.0	2	True	AATATA	-30
PB.3291.3	chr14	-	2355	5	full-splice_match	PIP4P1	ENST00000554028.3	1118	5	-710	-527	13	-1	multi-exon	FALSE	canonical	1	430494	junction_3	67621.42155920342	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	128	577	20.0	24	False	AATAAA	-16
PB.5522.5	chr18	+	4224	2	incomplete-splice_match	TIMM21	ENST00000577952.1	858	3	-11	-745	4	-1	intron_retention	FALSE	canonical	1	348206	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	283	669	30.0	4	True	AATAAA	-14
PB.5522.4	chr18	+	4126	3	novel_in_catalog	TIMM21	novel	3095	6	NA	NA	2	-2	intron_retention	FALSE	canonical	1	348206	junction_1	41945.5	NA	2	1	TRUE	NA	NA	NA	C	coding	128	387	285	671	25.0	2	True	AATAAA	-13
PB.584.5	chr1	+	2358	18	novel_in_catalog	STXBP3	novel	561	4	NA	NA	0	-9	no_combination_of_known_junctions	FALSE	canonical	1	2016	junction_8	109736.19247091564	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	861	1718	35.0	0	True	AATAAA	-11
PB.10641.1	chr7	-	3316	11	novel_in_catalog	PCLO	novel	20329	25	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	1126	junction_10	16681.578865623003	NA	0	NA	TRUE	NA	NA	NA	A	coding	377	1134	185	1318	25.0	15	False	AATAAA	-24
PB.5522.1	chr18	+	1542	6	full-splice_match	TIMM21	ENST00000169551.10	3095	6	-5	1558	-5	186	multi-exon	TRUE	canonical	1	348206	junction_1	46668.46846683529	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	304	1050	25.0	-262	False	AATACA	-24
PB.584.2	chr1	+	2592	20	novel_not_in_catalog	STXBP3	novel	561	4	NA	NA	-11	-9	any annotated donor/acceptor	FALSE	canonical	1	36	junction_19	133416.36268947995	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	76	1845	35.0	-11	True	AATAAA	-11
PB.5522.3	chr18	+	1480	5	novel_in_catalog	TIMM21	novel	3095	6	NA	NA	1	44	intron_retention	FALSE	canonical	1	348206	junction_1	52075.735256451255	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	286	672	70.0	1	True	NA	NA
PB.5522.2	chr18	+	1338	6	full-splice_match	TIMM21	ENST00000169551.10	3095	6	12	1745	0	-1	multi-exon	FALSE	canonical	1	348206	junction_1	46668.46846683529	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	287	1033	30.0	0	True	AATAAA	-14
PB.584.8	chr1	+	2327	18	novel_in_catalog	STXBP3	novel	561	4	NA	NA	-1	-9	no_combination_of_known_junctions	FALSE	canonical	1	8574	junction_17	106304.50886816806	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	58	1632	35.0	7	True	AATAAA	-11
PB.11621.13	chr9	-	2615	11	full-splice_match	UBQLN1	ENST00000376395.8	4118	11	234	1269	-35	197	multi-exon	FALSE	canonical	1	863295	junction_9	174628.50651279703	NA	1	NA	TRUE	NA	NA	NA	C	coding	589	1770	291	2060	70.0	-26	True	AAAACA	-10
PB.10911.1	chr7	+	2926	6	novel_in_catalog	ZNF212	novel	2810	5	NA	NA	-17	-19	combination_of_known_junctions	FALSE	canonical	1	4265	junction_3	54478.454003761886	NA	3	NA	TRUE	NA	NA	NA	C	coding	300	903	849	1751	75.0	-17	False	AATAAA	-14
PB.245.1	chr1	-	2518	3	full-splice_match	SPOCD1	ENST00000468720.5	2667	3	110	39	-30	-19	multi-exon	FALSE	canonical	1	103773	junction_1	25461.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	94	285	275	559	80.0	54	True	NA	NA
PB.7728.1	chr22	+	1260	5	full-splice_match	TIMP3	ENST00000266085.6	4603	5	-18	3361	-18	-3361	multi-exon	TRUE	canonical	1	1212590	junction_1	339747.4843387365	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	320	955	75.0	-9633	False	AATATA	-15
PB.8637.9	chr3	+	3252	7	novel_in_catalog	FYTTD1	novel	718	7	NA	NA	27	1916	no_combination_of_known_junctions	FALSE	canonical	1	789	junction_4	223216.48753894103	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	68	865	30.0	19	True	AATAAA	-19
PB.8637.8	chr3	+	3543	10	novel_not_in_catalog	FYTTD1	novel	718	7	NA	NA	14	1917	any annotated donor/acceptor	FALSE	canonical	1	482	junction_4	240801.52448242874	NA	3	1	TRUE	NA	NA	NA	C	coding	186	561	81	641	30.0	6	True	AATAAA	-20
PB.5148.1	chr17	+	5329	5	novel_not_in_catalog	YPEL2	novel	480	4	NA	NA	-85	-3	any annotated donor/acceptor	FALSE	canonical	1	104	junction_3	61770.25960363126	NA	2	NA	TRUE	NA	NA	NA	C	coding	115	348	76	423	30.0	5	True	AATAAA	-14
PB.7266.1	chr20	+	1690	10	incomplete-splice_match	PHF20	ENST00000374012.7	5922	18	0	50733	0	123	3prime_fragment	FALSE	canonical	1	216012	junction_9	19349.162629024657	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	130	1689	25.0	-1474	False	NA	NA
PB.5148.3	chr17	+	3231	2	full-splice_match	YPEL2	ENST00000582192.1	3193	2	-38	0	-6	0	multi-exon	FALSE	canonical	1	52892	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	coding	113	342	3	344	85.0	28	True	NA	NA
PB.5148.2	chr17	+	5254	5	full-splice_match	YPEL2	ENST00000312655.8	5217	5	-39	2	-26	-2	multi-exon	FALSE	canonical	1	52892	junction_1	39915.97085440864	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	367	717	30.0	8	True	AATAAA	-15
PB.8637.3	chr3	+	3033	9	full-splice_match	FYTTD1	ENST00000241502.8	6866	9	176	3657	-12	1559	multi-exon	FALSE	canonical	1	460748	junction_1	75768.27768103218	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	47	1003	35.0	40	True	ATTAAA	-28
PB.8637.2	chr3	+	3655	10	novel_in_catalog	FYTTD1	novel	718	7	NA	NA	-43	1917	combination_of_known_junctions	FALSE	canonical	1	8359	junction_3	240882.53079078367	NA	0	NA	TRUE	NA	NA	NA	C	coding	227	684	584	1267	30.0	-10	True	AATAAA	-20
PB.8637.1	chr3	+	4192	9	full-splice_match	FYTTD1	ENST00000241502.8	6866	9	85	2589	-43	-2589	multi-exon	FALSE	canonical	1	460748	junction_1	75768.27768103218	NA	4	1	TRUE	NA	NA	NA	C	coding	318	957	138	1094	35.0	-10	True	AATAAA	-27
PB.3428.26	chr14	-	6832	30	full-splice_match	NIN	ENST00000453196.5	6785	30	-39	-8	-39	5	multi-exon	FALSE	canonical	1	48689	junction_29	110147.6249680611	NA	0	NA	TRUE	NA	NA	NA	C	coding	2046	6141	231	6371	0.0	1	True	AATAAA	-22
PB.7981.22	chr3	-	2458	15	incomplete-splice_match	TOP2B	ENST00000424225.1	3525	27	-6	13423	-6	-1839	intron_retention	FALSE	canonical	1	254780	junction_14	147075.65094107113	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1842	617	2458	70.0	-7	True	NA	NA
PB.11024.4	chr8	+	3545	20	novel_in_catalog	CCAR2	novel	4853	21	NA	NA	5	-6	intron_retention	FALSE	canonical	1	8397	junction_7	188719.1658872518	NA	2	NA	TRUE	NA	NA	NA	C	coding	883	2652	114	2765	50.0	11	True	AATAAA	-9
PB.9946.3	chr6	+	3612	8	novel_not_in_catalog	PPARD	novel	3453	6	NA	NA	3	-3	any annotated donor/acceptor	FALSE	canonical	1	16202	junction_7	106828.01869455448	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	307	1404	30.0	3	True	AATAAA	-16
PB.9946.2	chr6	+	4067	9	novel_not_in_catalog	PPARD	novel	3453	6	NA	NA	-7	-2	any annotated donor/acceptor	FALSE	canonical	1	1861	junction_3	119982.75002682678	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	632	1957	25.0	-7	True	AATAAA	-30
PB.9946.1	chr6	+	3755	8	full-splice_match	PPARD	ENST00000360694.7	3747	8	-16	8	-16	5	multi-exon	FALSE	canonical	1	116226	junction_2	71755.3668868136	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	326	1651	25.0	-16	True	AATAAA	-24
PB.11172.6	chr8	-	2682	14	incomplete-splice_match	ARFGEF1	ENST00000262215.7	7225	39	-203	68391	-203	33274	3prime_fragment	FALSE	canonical	1	146604	junction_4	44707.122492530536	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2061	621	2681	75.0	1	True	NA	NA
PB.10409.1	chr7	+	2662	16	full-splice_match	SCIN	ENST00000297029.9	9713	16	-28	7079	-28	-4	multi-exon	FALSE	canonical	1	28366	junction_1	7259.629492841445	NA	0	NA	TRUE	NA	NA	NA	C	coding	715	2148	130	2277	100.0	-8268	False	NA	NA
PB.10409.2	chr7	+	2475	16	full-splice_match	SCIN	ENST00000297029.9	9713	16	-1	7239	-1	-164	multi-exon	FALSE	canonical	1	28366	junction_1	7259.629492841445	NA	3	NA	TRUE	NA	NA	NA	C	coding	715	2148	103	2250	70.0	0	True	NA	NA
PB.10409.3	chr7	+	3094	16	full-splice_match	SCIN	ENST00000297029.9	9713	16	35	6584	0	-7	multi-exon	FALSE	canonical	1	28366	junction_1	7259.629492841445	NA	1	NA	TRUE	NA	NA	NA	C	coding	715	2148	67	2214	40.0	0	True	ATTAAA	-9
PB.6013.1	chr19	+	2658	9	full-splice_match	CYP2S1	ENST00000310054.8	2782	9	124	0	-37	0	multi-exon	FALSE	canonical	1	81961	junction_6	30391.044148523426	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	93	1607	5.0	-66	False	ATTAAA	-24
PB.8601.39	chr3	+	2531	24	incomplete-splice_match	OPA1	ENST00000392436.7	3579	28	0	6078	0	3325	3prime_fragment	FALSE	canonical	1	217850	junction_1	122782.78659624998	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2373	159	2531	50.0	12	True	AATGAA	-4
PB.6013.2	chr19	+	2602	8	incomplete-splice_match	CYP2S1	ENST00000310054.8	2782	9	1281	1	608	-1	5prime_fragment	FALSE	canonical	1	81961	junction_5	28352.608203097778	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	2	1552	10.0	1091	False	ATTAAA	-23
PB.8601.34	chr3	+	5863	28	full-splice_match	OPA1	ENST00000646793.1	5830	28	-31	-2	0	0	multi-exon	FALSE	canonical	1	29773	junction_3	149037.88271280943	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	163	2937	35.0	8	True	ATTAAA	-16
PB.8601.35	chr3	+	3394	28	full-splice_match	OPA1	ENST00000646793.1	5830	28	-29	2465	0	-349	multi-exon	FALSE	canonical	1	29773	junction_3	149037.88271280943	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	161	2935	20.0	10	True	TATAAA	-22
PB.8601.36	chr3	+	3373	30	full-splice_match	OPA1	ENST00000392437.6	4087	30	-61	775	1	-531	multi-exon	FALSE	canonical	1	92773	junction_4	154777.99022840385	NA	0	NA	TRUE	NA	NA	NA	C	coding	978	2937	160	3096	25.0	11	True	AATATA	-35
PB.8601.37	chr3	+	5599	28	full-splice_match	OPA1	ENST00000646793.1	5830	28	-28	259	1	-18	multi-exon	FALSE	canonical	1	29773	junction_3	149037.88271280943	NA	3	NA	TRUE	NA	NA	NA	C	coding	924	2775	160	2934	20.0	11	True	AATAAA	-28
PB.7372.7	chr20	+	7670	10	novel_in_catalog	RAE1	novel	2639	12	NA	NA	-5	-10	intron_retention	FALSE	canonical	1	407803	junction_1	147174.04806026246	NA	2	NA	TRUE	NA	NA	NA	C	coding	166	501	184	684	5.0	-8	True	AATAAA	-14
PB.8601.31	chr3	+	5980	29	full-splice_match	OPA1	ENST00000361150.6	6330	29	66	284	-6	0	multi-exon	FALSE	canonical	1	29773	junction_3	159133.1824630877	NA	0	NA	TRUE	NA	NA	NA	C	coding	961	2886	169	3054	35.0	2	True	ATTAAA	-16
PB.8601.32	chr3	+	5701	29	full-splice_match	OPA1	ENST00000361828.7	6328	29	66	561	-6	-33	multi-exon	FALSE	canonical	1	217850	junction_1	121480.86285944488	NA	2	NA	TRUE	NA	NA	NA	C	coding	960	2883	169	3051	15.0	2	True	AATAAA	-13
PB.8601.33	chr3	+	3280	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	29	3088	-1	-685	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	0	NA	TRUE	NA	NA	NA	C	coding	997	2994	164	3157	45.0	7	True	AATAAA	-11
PB.7284.4	chr20	-	3596	7	novel_in_catalog	TTI1	novel	3958	9	NA	NA	5	3	intron_retention	FALSE	canonical	1	14505	junction_2	78880.53654032083	NA	0	NA	TRUE	NA	NA	NA	C	coding	935	2808	95	2902	40.0	-1	True	AATAAA	-25
PB.7284.5	chr20	-	4062	7	novel_in_catalog	TTI1	novel	3958	9	NA	NA	21	-6	intron_retention	FALSE	canonical	1	144262	junction_6	33417.52956367195	NA	3	NA	TRUE	NA	NA	NA	C	coding	1048	3147	79	3225	50.0	15	True	AATAAA	-16
PB.7284.6	chr20	-	3626	7	novel_in_catalog	TTI1	novel	3958	9	NA	NA	22	-6	intron_retention	FALSE	canonical	1	3818	junction_4	83286.31073325049	NA	1	NA	TRUE	NA	NA	NA	C	coding	877	2634	78	2711	50.0	16	True	AATAAA	-16
PB.7728.9	chr22	+	2464	5	full-splice_match	TIMP3	ENST00000266085.6	4603	5	260	1879	260	-1879	multi-exon	FALSE	canonical	1	1212590	junction_1	339747.4843387365	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	42	677	80.0	-9355	False	NA	NA
PB.7284.2	chr20	-	3929	9	full-splice_match	TTI1	ENST00000373448.6	3958	9	12	17	12	-2	multi-exon	FALSE	canonical	1	8778	junction_7	91935.83700977275	NA	11	NA	TRUE	NA	NA	NA	C	coding	1089	3270	228	3497	35.0	6	True	AATAAA	-20
PB.7284.3	chr20	-	3803	8	full-splice_match	TTI1	ENST00000373447.7	3825	8	12	10	5	5	multi-exon	FALSE	canonical	1	144262	junction_7	31712.616960600964	NA	1	NA	TRUE	NA	NA	NA	C	coding	1089	3270	95	3364	35.0	-1	True	AATAAA	-27
PB.6934.1	chr2	+	2248	12	full-splice_match	SPATS2L	ENST00000360760.9	2119	12	-128	-1	20	1	multi-exon	FALSE	canonical	1	150464	junction_1	219778.09974089547	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	279	1748	15.0	-2554	False	ATTAAA	-17
PB.6934.3	chr2	+	2095	12	novel_in_catalog	SPATS2L	novel	584	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	176867	junction_1	214234.9445802956	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	128	1597	15.0	1	True	ATTAAA	-15
PB.6934.2	chr2	+	2296	13	full-splice_match	SPATS2L	ENST00000409988.7	2698	13	402	0	0	0	multi-exon	FALSE	canonical	1	150464	junction_1	239140.558598027	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	122	1798	15.0	-1	True	ATTAAA	-15
PB.7284.8	chr20	-	3250	7	incomplete-splice_match	TTI1	ENST00000373447.7	3825	8	12	13298	5	70	3prime_fragment	FALSE	canonical	1	144262	junction_6	32537.993455941454	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	95	3223	20.0	-1	True	NA	NA
PB.7284.9	chr20	-	3258	2	incomplete-splice_match	TTI1	ENST00000373447.7	3825	8	7	27651	0	1150	3prime_fragment	FALSE	canonical	1	144262	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	804	2415	100	2514	95.0	-6	True	NA	NA
PB.6934.7	chr2	+	2048	11	novel_in_catalog	SPATS2L	novel	584	5	NA	NA	5723	0	combination_of_known_junctions	FALSE	canonical	1	30741	junction_1	245031.09110741437	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	81	1550	15.0	-7681	False	ATTAAA	-15
PB.6934.6	chr2	+	2288	12	novel_in_catalog	SPATS2L	novel	584	5	NA	NA	5697	6	combination_of_known_junctions	TRUE	canonical	1	30741	junction_1	263749.1920331677	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	107	1783	20.0	-7707	False	ATTAAA	-22
PB.9458.8	chr5	+	3102	12	incomplete-splice_match	SEC24A	ENST00000322887.8	2700	13	-33	4	2	-4	intron_retention	FALSE	canonical	1	174896	junction_3	38268.880460747845	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	287	2101	15.0	-15	True	AATAAA	-12
PB.2429.1	chr12	+	2630	15	full-splice_match	P3H3	ENST00000290510.9	2632	15	-3	5	-3	0	multi-exon	FALSE	canonical	1	186409	junction_1	56469.36927816238	NA	1	NA	TRUE	NA	NA	NA	A	coding	736	2211	35	2245	25.0	-7	True	AATAAA	-18
PB.11842.1	chr9	+	1521	3	incomplete-splice_match	LINC00963	ENST00000454968.5	1403	4	5440	17	-21	-17	5prime_fragment	FALSE	canonical	1	153062	junction_1	33228.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	0	True	NA	NA
PB.8529.14	chr3	-	2015	5	novel_not_in_catalog	ZMAT3	novel	9406	6	NA	NA	24943	0	any annotated donor/acceptor	FALSE	canonical	1	1613	junction_4	68001.4968047579	NA	0	NA	TRUE	NA	NA	NA	C	coding	176	531	207	737	100.0	NA	False	NA	NA
PB.8529.16	chr3	-	1916	7	novel_in_catalog	ZMAT3	novel	9406	6	NA	NA	-274	-656	combination_of_known_junctions	FALSE	canonical	1	13764	junction_6	66977.04598695652	NA	0	NA	TRUE	NA	NA	NA	C	coding	269	810	485	1294	25.0	-1	True	AGTAAA	-12
PB.8529.10	chr3	-	2881	6	novel_not_in_catalog	ZMAT3	novel	9406	6	NA	NA	-1945	0	any annotated donor/acceptor	FALSE	canonical	1	618	junction_5	68438.40290187958	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	734	1603	100.0	-54	False	NA	NA
PB.8529.12	chr3	-	2245	5	novel_in_catalog	ZMAT3	novel	9406	6	NA	NA	-191	0	no_combination_of_known_junctions	FALSE	canonical	1	2943	junction_3	66828.44068583375	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	221	967	100.0	-1	True	NA	NA
PB.8615.3	chr3	-	2278	15	novel_in_catalog	SDHAP1	novel	706	5	NA	NA	3	-9	combination_of_known_junctions	FALSE	canonical	1	5793	junction_9	52751.21016582638	NA	0	NA	TRUE	NA	NA	NA	B	coding	150	453	1461	1913	65.0	NA	False	AATAAA	-11
PB.7826.8	chr22	+	5190	19	novel_not_in_catalog	SREBF2	novel	5365	20	NA	NA	10	-2	any annotated donor/acceptor	FALSE	canonical	1	5092	junction_15	264492.3494168115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	157	3546	20.0	4	True	AATAAA	-19
PB.7826.9	chr22	+	5629	19	novel_in_catalog	SREBF2	novel	5365	20	NA	NA	13	-937	intron_retention	FALSE	canonical	1	37511	junction_15	258627.50338751654	NA	0	NA	TRUE	NA	NA	NA	C	coding	930	2793	154	2946	15.0	7	True	AATAAA	-14
PB.7826.6	chr22	+	4190	19	full-splice_match	SREBF2	ENST00000361204.8	5240	19	117	933	58	-931	multi-exon	FALSE	canonical	1	662917	junction_13	174250.3151729353	NA	1	NA	TRUE	NA	NA	NA	C	coding	1141	3426	50	3475	5.0	10	True	AATAAA	-20
PB.7826.7	chr22	+	5098	19	full-splice_match	SREBF2	ENST00000361204.8	5240	19	142	0	83	0	multi-exon	FALSE	canonical	1	662917	junction_13	174250.3151729353	NA	0	NA	TRUE	NA	NA	NA	C	coding	1141	3426	25	3450	10.0	-3	True	AATAAA	-23
PB.7826.4	chr22	+	4909	19	novel_not_in_catalog	SREBF2	novel	5365	20	NA	NA	7	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	276714.17880750366	NA	0	NA	TRUE	NA	NA	NA	C	coding	991	2976	290	3265	20.0	1	True	AATAAA	-19
PB.7826.5	chr22	+	4857	17	novel_in_catalog	SREBF2	novel	5365	20	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	13605	junction_7	287222.975752833	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	160	3210	15.0	1	True	AATAAA	-22
PB.7826.2	chr22	+	5343	20	full-splice_match	SREBF2	ENST00000612482.4	5365	20	19	3	-7	-2	multi-exon	FALSE	canonical	1	19064	junction_10	329091.0506869379	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	174	2228	20.0	-13	True	AATAAA	-19
PB.7826.3	chr22	+	5008	18	novel_in_catalog	SREBF2	novel	5365	20	NA	NA	6	-2	no_combination_of_known_junctions	FALSE	canonical	1	5938	junction_4	282588.9170627153	NA	5	NA	TRUE	NA	NA	NA	C	coding	1067	3204	161	3364	20.0	0	True	AATAAA	-19
PB.7826.1	chr22	+	4834	22	full-splice_match	SREBF2	ENST00000424354.5	5699	22	-72	937	-13	-937	multi-exon	FALSE	canonical	1	7281	junction_17	413942.43222545524	NA	2	NA	TRUE	NA	NA	NA	C	coding	684	2055	180	2234	15.0	-801	False	AATAAA	-14
PB.1180.1	chr1	+	1952	3	full-splice_match	IBA57	ENST00000366711.3	7817	3	-11	5876	-11	806	multi-exon	TRUE	canonical	1	39455	junction_1	14355.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	356	1071	14	1084	10.0	0	True	ATTAAA	-16
PB.7626.1	chr22	-	2548	7	full-splice_match	KLHL22	ENST00000328879.8	2616	7	75	-7	-6	7	multi-exon	FALSE	canonical	1	54671	junction_6	64528.042014693114	NA	0	NA	TRUE	NA	NA	NA	A	coding	634	1905	83	1987	20.0	-14	True	AATAAA	-34
PB.4987.1	chr17	-	2391	10	full-splice_match	GHDC	ENST00000587427.5	2396	10	6	-1	0	0	multi-exon	TRUE	canonical	1	155484	junction_8	32271.404411129475	NA	0	NA	TRUE	NA	NA	NA	A	coding	530	1593	184	1776	10.0	-1	True	NA	NA
PB.10151.10	chr6	-	3674	25	novel_not_in_catalog	MICAL1	novel	4112	25	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	1	22065	junction_6	207956.76690580824	NA	0	NA	TRUE	NA	NA	NA	C	coding	1080	3243	307	3549	30.0	-4	True	ATTAAA	-13
PB.7626.2	chr22	-	2569	7	novel_in_catalog	AC007731.5	novel	644	5	NA	NA	-49249	-12279	no_combination_of_known_junctions	FALSE	canonical	1	12166	junction_6	77920.95747543717	NA	0	NA	TRUE	NA	NA	NA	A	coding	634	1905	112	2016	15.0	-15	True	AATAAA	-26
PB.8615.2	chr3	-	2534	17	novel_not_in_catalog	SDHAP1	novel	706	5	NA	NA	13	-9	any annotated donor/acceptor	FALSE	canonical	1	5751	junction_2	55463.68127288202	NA	0	NA	TRUE	NA	NA	NA	B	coding	168	507	1551	2057	65.0	NA	False	AATAAA	-11
PB.6386.14	chr2	-	2296	5	full-splice_match	SUPT7L	ENST00000406540.5	2869	5	241	332	240	-314	multi-exon	FALSE	canonical	1	368012	junction_4	67041.04740520914	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	957	2195	30.0	4	True	NA	NA
PB.6880.26	chr2	+	4211	27	incomplete-splice_match	ITGA4	ENST00000397033.6	4189	28	921	-599	-95	599	5prime_fragment	FALSE	canonical	1	236407	junction_4	89779.53429137092	NA	3	NA	TRUE	NA	NA	NA	C	coding	820	2463	490	2952	25.0	1	True	AATACA	-19
PB.5049.1	chr17	+	2500	1	incomplete-splice_match	NMT1	ENST00000592782.5	4999	13	54901	6	746	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	122	369	548	916	25.0	-5879	False	AATAAA	-13
PB.741.1	chr1	+	1593	6	novel_in_catalog	SCNM1	novel	749	7	NA	NA	10	2	intron_retention	FALSE	canonical	1	534725	junction_1	213587.99862127085	NA	1	NA	TRUE	NA	NA	NA	A	coding	162	489	122	610	20.0	3	True	AATAAA	-22
PB.5049.2	chr17	+	1833	1	incomplete-splice_match	NMT1	ENST00000592782.5	4999	13	55567	7	1412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-5213	False	AATAAA	-12
PB.7111.17	chr2	-	4400	28	full-splice_match	HDLBP	ENST00000391976.6	4489	28	86	3	-3	-3	multi-exon	FALSE	canonical	1	286089	junction_27	801162.4517176107	NA	0	NA	TRUE	NA	NA	NA	C	coding	1268	3807	208	4014	15.0	18	True	AATAAA	-23
PB.5174.10	chr17	-	2832	2	full-splice_match	STRADA	ENST00000578507.2	2788	2	-28	-16	-1	16	multi-exon	FALSE	canonical	1	249029	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	28	False	NA	NA
PB.5174.11	chr17	-	2669	2	full-splice_match	STRADA	ENST00000578507.2	2788	2	-29	148	-2	-148	multi-exon	FALSE	canonical	1	249029	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	27	False	NA	NA
PB.6387.5	chr2	+	1842	13	full-splice_match	BABAM2	ENST00000344773.6	1852	13	7	3	7	-3	multi-exon	FALSE	canonical	1	39579	junction_11	148819.52006364026	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	132	1379	20.0	-5	True	ATTAAA	-24
PB.6387.4	chr2	+	1741	13	full-splice_match	BABAM2	ENST00000342045.6	1681	13	-63	3	0	-3	multi-exon	FALSE	canonical	1	29185	junction_1	152193.84267501594	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	205	1356	20.0	-12	True	ATTAAA	-24
PB.6387.7	chr2	+	1957	5	novel_not_in_catalog	MRPL33	novel	527	6	NA	NA	118566	9059	any annotated donor/acceptor	FALSE	canonical	1	5156	junction_4	203510.12589610866	NA	0	NA	TRUE	NA	NA	NA	B	coding	172	519	112	630	50.0	15	True	AATAAA	-40
PB.6387.6	chr2	+	1988	6	novel_not_in_catalog	MRPL33	novel	527	6	NA	NA	118556	9014	any annotated donor/acceptor	FALSE	canonical	1	5156	junction_5	233232.36651288345	NA	0	NA	TRUE	NA	NA	NA	B	coding	172	519	188	706	50.0	5	True	AATAAA	-15
PB.6387.1	chr2	+	1641	12	full-splice_match	BABAM2	ENST00000379624.5	1657	12	13	3	0	-3	multi-exon	FALSE	canonical	1	262061	junction_5	75736.51895980406	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	105	1256	20.0	22	True	ATTAAA	-24
PB.6387.3	chr2	+	1759	13	full-splice_match	BABAM2	ENST00000361704.6	1686	13	-76	3	-12	-3	multi-exon	FALSE	canonical	1	37926	junction_11	149215.0595116175	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	151	1281	20.0	-24	True	ATTAAA	-24
PB.6387.2	chr2	+	1760	13	full-splice_match	BABAM2	ENST00000344773.6	1852	13	-24	116	-24	-116	multi-exon	FALSE	canonical	1	39579	junction_11	148819.52006364026	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	163	1410	35.0	-2667	False	AATAAA	-20
PB.6387.9	chr2	+	2956	12	novel_not_in_catalog	MRPL33	novel	527	6	NA	NA	118620	319650	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	134922.8707836903	NA	0	NA	TRUE	NA	NA	NA	B	coding	363	1092	58	1149	75.0	-2562	False	NA	NA
PB.6386.15	chr2	-	1718	6	novel_not_in_catalog	SUPT7L	novel	4488	6	NA	NA	30	-313	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	192420.16191657257	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	525	1616	30.0	-1	True	NA	NA
PB.9297.6	chr5	+	5442	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	40	-897	-24	897	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	117	2783	20.0	-183	False	NA	NA
PB.10308.2	chr6	+	2685	16	full-splice_match	SYTL3	ENST00000367081.7	2692	16	1	6	1	1	multi-exon	FALSE	canonical	1	13057	junction_8	37851.59404950985	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	791	2419	25.0	-39	True	AATAAA	-16
PB.9297.4	chr5	+	4131	20	novel_not_in_catalog	HMGCR	novel	3395	20	NA	NA	31	303	any annotated donor/acceptor	FALSE	canonical	1	8553	junction_18	180136.08062835174	NA	6	1	TRUE	NA	NA	NA	C	coding	873	2622	126	2747	30.0	1	True	AATAAA	-20
PB.7602.10	chr22	-	4340	11	novel_not_in_catalog	DGCR2	novel	4361	9	NA	NA	-23	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	180375.54402149422	NA	2	1	TRUE	NA	NA	NA	C	coding	550	1653	225	1877	25.0	-19	True	AATAAA	-11
PB.3208.31	chr13	-	1640	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	186	2645	-99	66	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	238	1566	75.0	-1	True	NA	NA
PB.5687.10	chr19	-	3238	5	full-splice_match	ZNF561	ENST00000465974.5	625	5	29	-2642	2	-1132	multi-exon	FALSE	canonical	1	4442	junction_2	32050.86080747286	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	363	1502	50.0	1	True	NA	NA
PB.5687.13	chr19	-	1208	6	full-splice_match	ZNF561	ENST00000302851.7	4693	6	173	3312	-4	172	multi-exon	FALSE	canonical	1	51325	junction_1	29236.949173263616	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1017	192	1208	30.0	-22	True	AATAAA	-14
PB.5687.12	chr19	-	2185	6	full-splice_match	ZNF561	ENST00000302851.7	4693	6	169	2339	0	85	multi-exon	FALSE	canonical	1	51325	junction_1	29236.949173263616	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	196	1656	5.0	-26	True	NA	NA
PB.7742.27	chr22	-	4143	25	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	101	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	742361.3395818581	NA	1	NA	TRUE	NA	NA	NA	C	coding	1166	3501	180	3680	20.0	0	True	AATAAA	-14
PB.7742.25	chr22	-	7511	42	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	110	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_41	1245908.432917435	NA	6	1	TRUE	NA	NA	NA	C	coding	1960	5883	242	6124	20.0	9	True	AATAAA	-15
PB.2893.4	chr12	+	2276	12	full-splice_match	IFT81	ENST00000361948.8	3048	12	28	744	-14	-744	multi-exon	FALSE	canonical	1	3176	junction_11	53265.854647441025	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	545	1816	25.0	6	True	NA	NA
PB.9297.8	chr5	+	4730	20	full-splice_match	HMGCR	ENST00000287936.8	4585	20	51	-196	-13	196	multi-exon	FALSE	canonical	1	459471	junction_3	117831.45362163387	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	106	2772	35.0	-2	True	ATTAAA	-33
PB.9297.9	chr5	+	4485	20	novel_not_in_catalog	HMGCR	novel	3395	20	NA	NA	-13	-4	any annotated donor/acceptor	FALSE	canonical	1	8553	junction_18	180136.08062835174	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	106	2727	40.0	-2	True	AGTAAA	-24
PB.849.9	chr1	-	3963	14	full-splice_match	DCAF8	ENST00000326837.6	3972	14	3	6	3	-6	multi-exon	FALSE	canonical	1	74463	junction_13	235643.2934253198	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	299	2092	10.0	-23	True	AGTAAA	-16
PB.849.8	chr1	-	3880	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	12	-6	intron_retention	FALSE	canonical	1	28812	junction_12	240508.37947679817	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	216	2009	10.0	-14	True	AGTAAA	-16
PB.11825.14	chr9	+	4027	27	incomplete-splice_match	SPTAN1	ENST00000358161.9	7794	55	52439	3	-295	0	5prime_fragment	FALSE	canonical	1	908657	junction_7	317948.0316136608	NA	2	NA	TRUE	NA	NA	NA	C	coding	1121	3366	337	3702	20.0	NA	False	AATAAA	-15
PB.849.3	chr1	-	3722	12	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	29318	junction_11	251076.14223735672	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	128	1846	5.0	-1	True	AGTAAA	-21
PB.10308.6	chr6	+	2498	19	novel_not_in_catalog	SYTL3	novel	2692	16	NA	NA	-3	1	any annotated donor/acceptor	FALSE	canonical	1	2768	junction_11	39597.240791180026	NA	1	NA	TRUE	NA	NA	NA	C	coding	609	1830	403	2232	25.0	-43	True	AATAAA	-16
PB.849.1	chr1	-	4129	14	full-splice_match	DCAF8	ENST00000368073.7	4106	14	-23	0	2	0	multi-exon	TRUE	canonical	1	125357	junction_13	226519.3584946514	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	459	2252	5.0	-24	True	AGTAAA	-22
PB.849.7	chr1	-	4060	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	-9	-6	intron_retention	FALSE	canonical	1	76406	junction_12	230312.99001738915	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	396	2189	10.0	63	False	AGTAAA	-16
PB.4262.5	chr16	+	2518	8	novel_not_in_catalog	BFAR	novel	3039	8	NA	NA	-13	-396	any annotated donor/acceptor	FALSE	canonical	1	9013	junction_2	190517.93317369235	NA	2	NA	TRUE	NA	NA	NA	C	coding	311	936	575	1510	85.0	-33	True	NA	NA
PB.849.5	chr1	-	3730	13	novel_in_catalog	DCAF8	novel	4106	14	NA	NA	-11	-6	intron_retention	FALSE	canonical	1	127849	junction_12	219647.10124441975	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	66	1859	10.0	61	False	AGTAAA	-16
PB.335.1	chr1	-	2459	7	novel_not_in_catalog	HIVEP3	novel	12216	8	NA	NA	-13008	0	any annotated donor/acceptor	FALSE	canonical	1	44	junction_5	22678.362365553057	NA	0	NA	TRUE	NA	NA	NA	B	coding	632	1899	340	2238	75.0	NA	False	AAAAAG	-29
PB.6880.20	chr2	+	2297	14	incomplete-splice_match	ITGA4	ENST00000233573.6	2070	16	-43	13381	-19	592	3prime_fragment	FALSE	canonical	1	236407	junction_5	83842.9273926856	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	331	1833	75.0	-1	True	NA	NA
PB.10308.4	chr6	+	2998	17	novel_not_in_catalog	SYTL3	novel	2692	16	NA	NA	-192	-1	intron_retention	FALSE	canonical	1	2768	junction_9	42076.87434545957	NA	2	NA	TRUE	NA	NA	NA	C	coding	403	1212	1523	2734	25.0	-4248	False	AATAAA	-14
PB.10734.3	chr7	-	4138	17	full-splice_match	EPHB4	ENST00000358173.7	4329	17	179	12	179	-9	multi-exon	TRUE	canonical	1	215130	junction_16	154663.24193569264	NA	10	1	TRUE	NA	NA	NA	A	coding	987	2964	291	3254	15.0	202	False	AATAAA	-20
PB.10308.5	chr6	+	2531	17	novel_not_in_catalog	SYTL3	novel	2692	16	NA	NA	-3	3	any annotated donor/acceptor	FALSE	canonical	1	9691	junction_4	40408.25700583978	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	635	2263	30.0	-43	True	AATAAA	-18
PB.11226.12	chr8	-	4318	15	novel_in_catalog	NBN	novel	4666	16	NA	NA	-2	-2	no_combination_of_known_junctions	FALSE	canonical	1	2530	junction_13	153365.14529403747	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	411	2222	15.0	-1	True	NA	NA
PB.4873.1	chr17	+	3032	14	full-splice_match	ANKRD13B	ENST00000487527.5	3023	14	-10	1	4	0	multi-exon	FALSE	canonical	1	1469	junction_1	63442.41175937556	NA	2	1	TRUE	NA	NA	NA	A	coding	494	1485	370	1854	20.0	-3721	False	AATAAA	-17
PB.366.1	chr1	+	726	6	full-splice_match	RPS8	ENST00000396651.7	881	6	115	40	-21	0	multi-exon	FALSE	canonical	1	2360248	junction_1	2738670.724529884	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	46	672	30.0	7	True	AATAAA	-24
PB.366.2	chr1	+	3172	1	novel_in_catalog	RPS8	novel	881	6	NA	NA	-5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	23	True	AATAAA	-24
PB.6880.21	chr2	+	6778	28	full-splice_match	ITGA4	ENST00000397033.6	4189	28	161	-2750	-18	2750	multi-exon	FALSE	canonical	1	236407	junction_5	88541.76804658248	NA	2	NA	TRUE	NA	NA	NA	C	coding	1012	3039	330	3368	20.0	0	True	NA	NA
PB.11670.3	chr9	-	3975	5	full-splice_match	ZNF782	ENST00000478850.5	932	5	-154	-2889	-26	-47	multi-exon	FALSE	canonical	1	18022	junction_4	11148.911662130973	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	472	2571	70.0	-9	True	AATATA	-14
PB.7602.13	chr22	-	3510	7	incomplete-splice_match	DGCR2	ENST00000263196.11	4480	10	32	9866	-15	2227	3prime_fragment	FALSE	non_canonical	0	0	junction_4	167923.61506492237	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	217	1305	30.0	-11	True	NA	NA
PB.398.2	chr1	-	2173	1	antisense	novelGene_CDKN2C_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	B	coding	162	489	627	1115	65.0	0	True	NA	NA
PB.398.1	chr1	-	2843	1	antisense	novelGene_CDKN2C_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	162	489	599	1087	25.0	65	False	AATAAA	-17
PB.7599.12	chr22	+	2609	7	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-15	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	107561.64659032616	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	217	1134	40.0	-5	True	ATTAAA	-21
PB.330.5	chr1	+	1954	10	full-splice_match	NFYC	ENST00000447388.7	1950	10	-5	1	-5	1	multi-exon	FALSE	canonical	1	219416	junction_3	80537.08831217124	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	173	1180	15.0	0	True	AATAAA	-15
PB.7816.1	chr22	-	1041	4	full-splice_match	PHF5A	ENST00000216252.3	1086	4	44	1	44	-1	multi-exon	FALSE	canonical	1	347341	junction_1	14167.230577011946	NA	1	NA	TRUE	NA	NA	NA	A	coding	110	333	29	361	25.0	-4	True	AATAAA	-21
PB.1251.3	chr1	-	2980	1	incomplete-splice_match	ZNF496	ENST00000462139.1	9243	2	12690	771	12690	18	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	coding	12	39	606	644	20.0	NA	False	AATAAA	-19
PB.2372.1	chr11	+	2649	17	full-splice_match	APLP2	ENST00000338167.9	3270	17	-89	710	-5	16	multi-exon	FALSE	canonical	1	1485264	junction_6	899222.6006707452	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	147	2402	15.0	-87	False	TATAAA	-32
PB.6425.3	chr2	-	3817	13	full-splice_match	ATL2	ENST00000378954.8	2868	13	-25	-924	-2	924	multi-exon	FALSE	canonical	1	233787	junction_12	66664.61564485608	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1752	28	1779	40.0	-16	True	ATTAAA	-22
PB.2372.3	chr11	+	2588	17	novel_in_catalog	APLP2	novel	3742	19	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	1	641618	junction_12	1169970.1714856878	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	105	2228	15.0	-3	True	AATAAA	-30
PB.2372.2	chr11	+	2482	17	novel_in_catalog	APLP2	novel	3742	19	NA	NA	26	12	combination_of_known_junctions	FALSE	canonical	1	641618	junction_12	1169970.1714856878	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	116	2239	25.0	-56	False	TATAAA	-28
PB.2372.5	chr11	+	3378	15	novel_in_catalog	APLP2	novel	3742	19	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	83402	junction_11	1138533.0602499258	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1935	88	2022	20.0	-3	True	AATAAA	-14
PB.2372.4	chr11	+	2548	16	full-splice_match	APLP2	ENST00000528499.5	2530	16	-10	-8	-7	8	multi-exon	FALSE	canonical	1	1881625	junction_1	709350.6946093919	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	95	2182	10.0	-35	False	AATAAA	-36
PB.2372.7	chr11	+	3471	16	full-splice_match	APLP2	ENST00000528499.5	2530	16	0	-941	0	-57	multi-exon	FALSE	canonical	1	1881625	junction_1	709350.6946093919	NA	1	NA	TRUE	NA	NA	NA	C	coding	695	2088	85	2172	30.0	0	True	ATTAAA	-21
PB.2372.6	chr11	+	2422	16	full-splice_match	APLP2	ENST00000528499.5	2530	16	-3	111	0	16	multi-exon	FALSE	canonical	1	1881625	junction_1	709350.6946093919	NA	0	NA	TRUE	NA	NA	NA	C	coding	695	2088	88	2175	15.0	-3	True	TATAAA	-32
PB.2372.9	chr11	+	3732	18	full-splice_match	APLP2	ENST00000263574.9	3727	18	-12	7	0	0	multi-exon	FALSE	canonical	1	641618	junction_13	1235096.4562907096	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	85	2376	20.0	0	True	AATAAA	-14
PB.2372.8	chr11	+	3548	17	full-splice_match	APLP2	ENST00000338167.9	3270	17	121	-399	121	0	multi-exon	FALSE	canonical	1	1485264	junction_6	899222.6006707452	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	96	2192	20.0	123	False	AATAAA	-14
PB.6425.8	chr2	-	5028	13	novel_in_catalog	ATL2	novel	2868	13	NA	NA	-5	-9	intron_retention	FALSE	canonical	1	2953	junction_12	155263.97028931085	NA	3	1	TRUE	NA	NA	NA	C	coding	589	1770	31	1800	40.0	-19	True	ATTAAA	-17
PB.6425.9	chr2	-	5045	12	novel_in_catalog	ATL2	novel	2868	13	NA	NA	-134	-10	intron_retention	FALSE	canonical	1	233787	junction_11	69300.63598076747	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	160	1818	40.0	638	False	ATTAAA	-16
PB.7491.2	chr21	-	1212	7	full-splice_match	CFAP298	ENST00000290155.7	1692	7	473	7	-41	-7	multi-exon	FALSE	canonical	1	632855	junction_6	184658.24779455576	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	151	1023	45.0	-22	True	AATAAA	-12
PB.10782.1	chr7	-	2495	12	incomplete-splice_match	LAMB4	ENST00000475469.1	3670	23	34832	-82	-29666	9	5prime_fragment	FALSE	canonical	1	2329	junction_8	999.983437879377	NA	0	NA	TRUE	NA	NA	NA	A	coding	677	2034	100	2133	45.0	NA	False	AATAAA	-27
PB.68.2	chr1	-	1688	12	full-splice_match	ENO1	ENST00000234590.10	1781	12	89	4	49	-2	multi-exon	FALSE	canonical	1	5131498	junction_10	6361867.975354327	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	28	1332	15.0	660	False	AATAAA	-21
PB.731.19	chr1	-	2485	22	novel_in_catalog	ARNT	novel	4887	22	NA	NA	11	39	combination_of_known_junctions	FALSE	canonical	1	21065	junction_12	93680.479315902	NA	0	NA	TRUE	NA	NA	NA	C	coding	784	2355	32	2386	15.0	-3	True	AATAAA	-16
PB.8939.2	chr4	+	2858	10	full-splice_match	AP1AR	ENST00000274000.9	2902	10	50	-6	-38	6	multi-exon	FALSE	canonical	1	130928	junction_1	76174.34883424333	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	306	1214	40.0	0	True	AATAAA	-22
PB.8939.1	chr4	+	1884	10	full-splice_match	AP1AR	ENST00000274000.9	2902	10	38	980	35	-610	multi-exon	FALSE	canonical	1	130928	junction_1	76174.34883424333	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	318	1226	65.0	-12	True	TATAAA	-36
PB.722.1	chr1	+	2522	17	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	1	-3	combination_of_known_junctions	TRUE	canonical	1	72814	junction_9	113508.14272565358	NA	0	NA	TRUE	NA	NA	NA	C	coding	548	1647	663	2309	25.0	2	True	ATTAAA	-12
PB.722.3	chr1	+	2232	15	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	48	-3	no_combination_of_known_junctions	FALSE	canonical	1	4748	junction_3	122336.47154560898	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1905	115	2019	25.0	-26	True	ATTAAA	-12
PB.7039.2	chr2	-	2270	3	intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7876	junction_1	3636.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	107	324	127	450	60.0	-1	True	NA	NA
PB.722.5	chr1	+	2351	16	full-splice_match	PRPF3	ENST00000324862.6	2433	16	78	4	75	-4	multi-exon	FALSE	canonical	1	72814	junction_8	105068.58666697463	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	88	2139	25.0	1	True	ATTAAA	-11
PB.722.4	chr1	+	2353	16	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	51	-3	no_combination_of_known_junctions	FALSE	canonical	1	11956	junction_13	122678.89582508567	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	613	1872	25.0	-23	True	ATTAAA	-12
PB.722.7	chr1	+	4484	17	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	72	-2	combination_of_known_junctions	FALSE	canonical	1	1874	junction_5	124434.30246168056	NA	3	NA	TRUE	NA	NA	NA	C	coding	538	1617	2654	4270	20.0	-2	True	ATTAAA	-13
PB.5752.3	chr19	-	1352	9	full-splice_match	DHPS	ENST00000210060.11	1363	9	11	0	11	0	multi-exon	FALSE	canonical	1	838450	junction_8	93523.85284439138	NA	0	NA	TRUE	NA	NA	NA	A	coding	369	1110	126	1235	5.0	4	True	NA	NA
PB.722.9	chr1	+	4183	15	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	80	-4	intron_retention	FALSE	canonical	1	72814	junction_9	113138.68065217255	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	584	1822	25.0	6	True	ATTAAA	-11
PB.722.8	chr1	+	4091	14	novel_in_catalog	PRPF3	novel	2433	16	NA	NA	77	-3	intron_retention	FALSE	canonical	1	72814	junction_8	106781.94741200683	NA	12	NA	TRUE	NA	NA	NA	C	coding	547	1644	86	1729	25.0	3	True	ATTAAA	-12
PB.11725.4	chr9	+	2740	4	full-splice_match	KIAA1958	ENST00000337530.10	11775	4	23	9012	23	-4924	multi-exon	FALSE	canonical	1	29869	junction_2	3942.141239929838	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	274	2424	80.0	20	True	NA	NA
PB.4169.1	chr16	-	4248	19	incomplete-splice_match	PKD1	ENST00000262304.8	14138	46	35702	0	104	0	5prime_fragment	FALSE	canonical	1	215509	junction_4	89283.8954423362	NA	0	NA	TRUE	NA	NA	NA	A	coding	958	2877	355	3231	15.0	NA	False	AATAAA	-17
PB.7828.1	chr22	-	942	6	full-splice_match	CENPM	ENST00000215980.9	966	6	12	12	-1	4	multi-exon	FALSE	canonical	1	341982	junction_1	112969.02682487798	NA	0	NA	TRUE	NA	NA	NA	A	coding	180	543	77	619	20.0	-29	True	NA	NA
PB.9464.4	chr5	-	1872	9	novel_in_catalog	H2AFY	novel	2789	9	NA	NA	-24	-19	combination_of_known_junctions	FALSE	canonical	1	868319	junction_8	518249.4890570926	NA	1	NA	TRUE	NA	NA	NA	B	coding	371	1116	235	1350	25.0	-2	True	AATGAA	-20
PB.9464.5	chr5	-	2738	6	novel_in_catalog	H2AFY	novel	2789	9	NA	NA	-4	1704	combination_of_known_junctions	FALSE	canonical	1	39358	junction_1	863518.470408271	NA	3	NA	TRUE	NA	NA	NA	B	coding	196	591	215	805	20.0	746	False	ACTAAA	-20
PB.2127.1	chr11	+	2827	25	full-splice_match	TPCN2	ENST00000294309.7	2931	25	19	85	-16	-85	multi-exon	FALSE	canonical	1	62631	junction_17	35613.06823498047	NA	0	NA	TRUE	NA	NA	NA	C	coding	752	2259	83	2341	10.0	-31	True	NA	NA
PB.2127.3	chr11	+	2723	24	novel_in_catalog	TPCN2	novel	2931	25	NA	NA	1	-95	no_combination_of_known_junctions	FALSE	canonical	1	6093	junction_2	41607.1284736893	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	229	2247	15.0	-14	True	NA	NA
PB.2127.2	chr11	+	2752	24	incomplete-splice_match	TPCN2	ENST00000635811.1	3824	27	-3	47867	-1	-95	3prime_fragment	FALSE	canonical	1	32699	junction_16	38585.128188993476	NA	1	NA	TRUE	NA	NA	NA	C	coding	584	1755	68	1822	15.0	-16	True	NA	NA
PB.2127.5	chr11	+	4899	24	incomplete-splice_match	TPCN2	ENST00000635811.1	3824	27	11	45706	11	-14	3prime_fragment	FALSE	canonical	1	32699	junction_16	38585.128188993476	NA	3	2	TRUE	NA	NA	NA	C	coding	584	1755	54	1808	70.0	-2	True	NA	NA
PB.2127.4	chr11	+	4955	25	novel_not_in_catalog	TPCN2	novel	2931	25	NA	NA	2	-14	any annotated donor/acceptor	FALSE	canonical	1	13881	junction_7	39729.464113551796	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	63	2318	70.0	-11	True	NA	NA
PB.9246.1	chr5	+	2903	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	27	2090	35.0	3	True	AATAAA	-17
PB.11725.3	chr9	+	2581	3	novel_in_catalog	KIAA1958	novel	11775	4	NA	NA	9	-4924	no_combination_of_known_junctions	FALSE	canonical	1	1126	junction_2	15190.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	288	1670	80.0	6	True	NA	NA
PB.5174.4	chr17	-	2144	12	full-splice_match	STRADA	ENST00000375840.9	2209	12	64	1	5	-1	multi-exon	FALSE	canonical	1	84622	junction_9	96987.46589309175	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	260	1381	20.0	-15	True	ATTAAA	-21
PB.5174.5	chr17	-	3027	10	novel_in_catalog	STRADA	novel	1687	14	NA	NA	-4	1	intron_retention	FALSE	canonical	1	17592	junction_1	128346.27774977435	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	272	985	20.0	-27	True	ATTAAA	-20
PB.5174.6	chr17	-	2087	11	full-splice_match	STRADA	ENST00000639835.1	2130	11	22	21	-2	0	multi-exon	FALSE	canonical	1	29602	junction_9	98500.20126380453	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	144	1328	20.0	35	False	ATTAAA	-17
PB.5174.7	chr17	-	2976	10	novel_in_catalog	STRADA	novel	1687	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	17592	junction_1	138736.66470051176	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	225	938	20.0	-4	True	ATTAAA	-16
PB.5174.1	chr17	-	2114	11	full-splice_match	STRADA	ENST00000638708.1	2153	11	24	15	1	1	multi-exon	TRUE	canonical	1	46820	junction_9	94395.34602240726	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	141	1349	15.0	38	False	ATTAAA	-23
PB.5174.2	chr17	-	2920	9	novel_in_catalog	STRADA	novel	1687	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	17592	junction_1	135368.0411945869	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	101	877	20.0	-1	True	ATTAAA	-21
PB.5174.3	chr17	-	2146	12	full-splice_match	STRADA	ENST00000638702.1	2140	12	-4	-2	1	-1	multi-exon	FALSE	canonical	1	19614	junction_10	109487.56761997612	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	262	1383	20.0	38	False	ATTAAA	-21
PB.5174.8	chr17	-	2964	9	full-splice_match	STRADA	ENST00000578008.6	1153	9	-53	-1758	-4	0	multi-exon	FALSE	canonical	1	17592	junction_1	132036.0281939531	NA	1	NA	TRUE	NA	NA	NA	C	coding	266	801	127	927	20.0	-27	True	ATTAAA	-15
PB.5174.9	chr17	-	2153	13	full-splice_match	STRADA	ENST00000336174.11	2255	13	79	23	0	0	multi-exon	FALSE	canonical	1	25189	junction_9	120207.25395043993	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	101	1396	20.0	-1	True	ATTAAA	-15
PB.8344.16	chr3	-	3031	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	34	3765	12	-34	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	144	1760	55.0	42	True	NA	NA
PB.8344.17	chr3	-	3211	15	full-splice_match	KPNA1	ENST00000494339.5	1923	15	18	-1306	-10	1	multi-exon	TRUE	canonical	1	11811	junction_10	171947.93123186554	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	892	1905	30.0	20	True	AATAAA	-28
PB.8344.12	chr3	-	3833	13	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	1	855	intron_retention	FALSE	canonical	1	1717	junction_3	156328.57292581172	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	183	1673	5.0	3	True	AGTAAA	-20
PB.8344.10	chr3	-	3934	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-19	2915	-2	816	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	197	1813	45.0	-11	True	ATTAAA	-28
PB.8344.11	chr3	-	3836	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	0	855	intron_retention	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	60	1676	5.0	8	True	AGTAAA	-20
PB.4990.28	chr17	-	2694	24	full-splice_match	STAT3	ENST00000588969.5	2772	24	8	70	8	-2	multi-exon	FALSE	canonical	1	154019	junction_23	257508.44500129117	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	198	2510	15.0	-1	True	AATAGA	-11
PB.731.12	chr1	-	4321	22	full-splice_match	ARNT	ENST00000358595.9	4887	22	172	394	13	-5	multi-exon	FALSE	canonical	1	173988	junction_21	67395.1114417762	NA	2	NA	TRUE	NA	NA	NA	C	coding	789	2370	30	2399	20.0	-1	True	NA	NA
PB.8344.18	chr3	-	2962	14	novel_in_catalog	KPNA1	novel	6830	14	NA	NA	2	-34	combination_of_known_junctions	FALSE	canonical	1	37679	junction_13	142320.04540654388	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	75	1691	55.0	-7	True	NA	NA
PB.8344.19	chr3	-	3015	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-15	3830	2	-99	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	193	1809	25.0	-7	True	NA	NA
PB.744.1	chr1	+	1292	10	full-splice_match	PSMD4	ENST00000368884.7	1350	10	44	14	-11	-1	multi-exon	FALSE	canonical	1	131353	junction_2	658446.2197921842	NA	0	NA	TRUE	NA	NA	NA	A	coding	377	1134	37	1170	25.0	2	True	AATAAA	-20
PB.7098.5	chr2	-	3042	10	novel_not_in_catalog	NDUFA10	novel	662	6	NA	NA	4	-4375	intron_retention	FALSE	canonical	1	1686	junction_1	501084.8080197824	NA	2	NA	TRUE	NA	NA	NA	C	coding	388	1167	39	1205	40.0	-8	True	NA	NA
PB.7700.1	chr22	+	2781	12	full-splice_match	SEC14L2	ENST00000615189.4	4382	12	123	1478	-12	-1	multi-exon	FALSE	canonical	1	103798	junction_1	36852.91971500577	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	138	1349	35.0	-4	True	AATAAA	-17
PB.10793.1	chr7	-	3937	5	full-splice_match	BMT2	ENST00000297145.8	3981	5	42	2	42	-2	multi-exon	FALSE	canonical	1	98225	junction_1	16165.739528397704	NA	1	NA	TRUE	NA	NA	NA	C	coding	405	1218	125	1342	10.0	-30	True	ATTAAA	-18
PB.8710.1	chr4	+	2028	4	full-splice_match	MED28	ENST00000237380.11	10868	4	6	8834	6	-2899	multi-exon	FALSE	canonical	1	627945	junction_2	99966.91022644554	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	19	555	15.0	-9	True	AATATA	-20
PB.10793.4	chr7	-	2930	5	full-splice_match	BMT2	ENST00000297145.8	3981	5	42	1009	42	-1009	multi-exon	FALSE	canonical	1	98225	junction_1	16165.739528397704	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	125	1342	50.0	-30	True	ATTAAA	-21
PB.8547.9	chr3	-	3976	6	novel_not_in_catalog	LAMP3	novel	3375	6	NA	NA	148	-6252	any annotated donor/acceptor	FALSE	canonical	1	17045	junction_1	54619.468897454506	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	80	1336	100.0	-1	True	NA	NA
PB.11788.1	chr9	+	1309	9	full-splice_match	RABEPK	ENST00000394125.8	1466	9	-2	159	-2	-56	multi-exon	FALSE	canonical	1	134950	junction_1	134080.75809837284	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	172	1290	25.0	-3	True	AATAAA	-16
PB.909.7	chr1	+	3430	3	full-splice_match	MPZL1	ENST00000392121.7	3421	3	-7	-2	-2	2	multi-exon	FALSE	canonical	1	25829	junction_2	107154.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	171	530	15.0	0	True	AATACA	-17
PB.5035.8	chr17	+	3446	3	novel_in_catalog	TMUB2	novel	1580	6	NA	NA	-1	0	intron_retention	FALSE	canonical	1	119314	junction_1	124535.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	1680	2585	10.0	-45	True	AATAAA	-16
PB.5035.9	chr17	+	2023	3	novel_in_catalog	TMUB2	novel	1580	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	38266	junction_1	165059.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	253	1158	20.0	-45	True	AATAAA	-20
PB.7700.2	chr22	+	3516	12	full-splice_match	SEC14L2	ENST00000615189.4	4382	12	151	715	-10	-715	multi-exon	FALSE	canonical	1	103798	junction_1	36852.91971500577	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	110	1321	30.0	-10	True	NA	NA
PB.8742.8	chr4	-	4004	25	novel_not_in_catalog	RFC1	novel	4859	25	NA	NA	12790	479	intron_retention	FALSE	canonical	1	38	junction_24	106605.28946733802	NA	2	1	TRUE	NA	NA	NA	C	coding	1031	3096	366	3461	30.0	426	False	AATAAA	-13
PB.8742.6	chr4	-	4149	24	novel_in_catalog	RFC1	novel	4859	25	NA	NA	0	598	intron_retention	FALSE	canonical	1	19095	junction_18	111034.2730574272	NA	0	NA	TRUE	NA	NA	NA	C	coding	1121	3366	122	3487	30.0	-1	True	ATTAAA	-22
PB.5035.1	chr17	+	3849	2	incomplete-splice_match	TMUB2	ENST00000587630.1	1191	3	-2400	-39	0	0	intron_retention	FALSE	canonical	1	368385	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	2078	2983	20.0	-29	True	AATAAA	-21
PB.5035.2	chr17	+	2661	4	novel_in_catalog	TMUB2	novel	1580	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	43477	junction_2	138785.5348186146	NA	0	NA	TRUE	NA	NA	NA	C	coding	312	939	858	1796	20.0	-17	True	AATAAA	-20
PB.5035.3	chr17	+	1991	4	full-splice_match	TMUB2	ENST00000538716.6	1953	4	-7	-31	-3	-1	multi-exon	FALSE	canonical	1	46174	junction_1	151545.49165404646	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	191	1126	20.0	-16	True	AATAAA	-20
PB.5035.4	chr17	+	2518	4	novel_in_catalog	TMUB2	novel	1580	6	NA	NA	9	1	intron_retention	FALSE	canonical	1	76434	junction_2	128716.0716210511	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	745	1650	25.0	-35	True	AATAAA	-23
PB.5035.5	chr17	+	2412	3	full-splice_match	TMUB2	ENST00000319511.6	2418	3	10	-4	10	0	multi-exon	FALSE	canonical	1	67685	junction_1	150350.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	641	1546	20.0	-34	True	AATAAA	-21
PB.5035.6	chr17	+	2352	3	incomplete-splice_match	TMUB2	ENST00000587989.1	1969	4	140	-16	-17	0	5prime_fragment	FALSE	canonical	1	47648	junction_1	160368.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	551	1486	20.0	-61	True	AATAAA	-21
PB.5035.7	chr17	+	2305	5	novel_in_catalog	TMUB2	novel	1580	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	43900	junction_4	127756.28448803409	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	757	1662	10.0	-47	True	AATAAA	-17
PB.8459.2	chr3	+	3828	17	novel_in_catalog	HPS3	novel	4665	17	NA	NA	-20	-1	combination_of_known_junctions	TRUE	canonical	1	12485	junction_14	68674.55040576235	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	107	2779	25.0	-34	True	AATAAA	-23
PB.10946.22	chr7	+	2933	1	novel_in_catalog	INSIG1	novel	2623	6	NA	NA	5694	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1028	False	ATTAAA	-12
PB.8178.6	chr3	-	1913	13	full-splice_match	RFT1	ENST00000296292.7	5108	13	28	3167	19	15	multi-exon	FALSE	canonical	1	179492	junction_12	33479.27616410221	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	35	1660	25.0	0	True	TTTAAA	-28
PB.8547.7	chr3	-	3300	7	novel_in_catalog	LAMP3	novel	3375	6	NA	NA	148	-4	combination_of_known_junctions	FALSE	canonical	1	135	junction_6	67327.40594888203	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	258	1436	20.0	-1	True	AATAAA	-45
PB.8459.4	chr3	+	3581	17	full-splice_match	HPS3	ENST00000296051.6	4665	17	81	1003	26	-232	multi-exon	FALSE	canonical	1	157291	junction_1	44363.01655517803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1004	3015	60	3074	0.0	13	True	NA	NA
PB.756.1	chr1	-	2827	13	full-splice_match	TDRKH	ENST00000368824.7	2824	13	-6	3	-6	-3	multi-exon	FALSE	canonical	1	40773	junction_12	34345.893707638315	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	177	1862	45.0	-41	True	AATAAA	-21
PB.8547.6	chr3	-	3359	7	novel_not_in_catalog	LAMP3	novel	3375	6	NA	NA	106	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	66937.74829396838	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	122	1495	20.0	-5	True	AATAAA	-45
PB.3208.29	chr13	-	2143	8	full-splice_match	EDNRB	ENST00000377211.8	4471	8	335	1993	-36	-124	multi-exon	FALSE	canonical	1	36158	junction_7	67989.4074805114	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	89	1417	60.0	-1	True	NA	NA
PB.2006.4	chr11	-	2248	21	full-splice_match	NXF1	ENST00000294172.6	2346	21	52	46	0	-1	multi-exon	FALSE	canonical	1	367425	junction_20	180179.33712154676	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	85	1944	10.0	-2	True	TATAAA	-13
PB.11790.21	chr9	+	4684	25	full-splice_match	GAPVD1	ENST00000394083.6	4747	25	-17	80	-3	0	multi-exon	FALSE	canonical	1	27796	junction_16	82407.86791816488	NA	0	NA	TRUE	NA	NA	NA	C	coding	1412	4239	167	4405	75.0	0	True	AAAAAG	-31
PB.11790.20	chr9	+	4828	26	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-3	0	intron_retention	FALSE	canonical	1	58008	junction_1	62617.77022730847	NA	0	NA	TRUE	NA	NA	NA	C	coding	1460	4383	167	4549	75.0	0	True	AAAAAG	-31
PB.11790.23	chr9	+	3147	17	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-3	0	intron_retention	FALSE	canonical	1	58008	junction_1	57113.96838435739	NA	0	NA	TRUE	NA	NA	NA	C	coding	993	2979	167	3145	80.0	0	True	NA	NA
PB.11790.22	chr9	+	3414	19	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-3	0	intron_retention	FALSE	canonical	1	266	junction_2	90717.43368435139	NA	5	NA	TRUE	NA	NA	NA	C	coding	993	2979	434	3412	80.0	0	True	NA	NA
PB.11790.25	chr9	+	3259	19	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-1	0	intron_retention	FALSE	canonical	1	21691	junction_14	95161.92169211277	NA	2	NA	TRUE	NA	NA	NA	C	coding	1020	3060	200	3259	75.0	16	True	NA	NA
PB.11790.24	chr9	+	6927	27	novel_in_catalog	GAPVD1	novel	3720	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	4700	junction_1	79898.19775414803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1460	4383	282	4664	5.0	2	True	AATAAA	-20
PB.8547.3	chr3	-	3165	6	full-splice_match	LAMP3	ENST00000265598.7	3375	6	177	33	148	-33	multi-exon	FALSE	canonical	1	69476	junction_5	31566.21126837999	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	80	1330	50.0	-1	True	AATAAA	-16
PB.5322.2	chr17	-	994	2	full-splice_match	OXLD1	ENST00000575992.1	821	2	-57	-116	1	-4	multi-exon	FALSE	canonical	1	58152	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-7	True	AATAAA	-20
PB.1683.1	chr10	-	4248	16	full-splice_match	MCMBP	ENST00000369077.3	2465	16	-29	-1754	-29	-39	multi-exon	FALSE	canonical	1	253062	junction_15	153529.08455953514	NA	4	NA	TRUE	NA	NA	NA	C	coding	640	1923	295	2217	35.0	-36	True	NA	NA
PB.11191.1	chr8	+	2947	6	full-splice_match	PI15	ENST00000260113.6	6732	6	-58	3843	-55	39	multi-exon	FALSE	canonical	1	20493	junction_1	15878.97895961828	NA	0	NA	TRUE	NA	NA	NA	A	coding	258	777	238	1014	60.0	-4	True	AATAAA	-15
PB.4832.18	chr17	-	4722	14	novel_not_in_catalog	USP22	novel	5220	13	NA	NA	67	-170	intron_retention	TRUE	canonical	0	0	junction_1	467374.6880301732	NA	1	1	TRUE	NA	NA	NA	C	coding	525	1578	138	1715	80.0	35	True	NA	NA
PB.501.4	chr1	-	3087	7	novel_not_in_catalog	AL359762.3	novel	2686	3	NA	NA	-17772	-54777	any annotated donor/acceptor	FALSE	canonical	1	7682	junction_1	99301.79031408917	NA	2	NA	TRUE	NA	NA	NA	B	coding	389	1170	46	1215	35.0	-21	True	AATAAA	-17
PB.10120.2	chr6	+	3799	1	full-splice_match	POU3F2	ENST00000328345.7	4879	1	577	503	577	-503	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	263	792	246	1037	25.0	-3	True	AATAAA	-21
PB.4832.17	chr17	-	4845	12	novel_in_catalog	USP22	novel	5220	13	NA	NA	68	-170	intron_retention	FALSE	canonical	1	15161	junction_11	484897.91770828905	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	319	1581	80.0	36	True	NA	NA
PB.4832.14	chr17	-	5116	13	full-splice_match	USP22	ENST00000261497.8	5220	13	-70	174	-70	-170	multi-exon	FALSE	canonical	1	850889	junction_12	298845.56648775784	NA	6	NA	TRUE	NA	NA	NA	C	coding	525	1578	275	1852	80.0	321	False	NA	NA
PB.4832.15	chr17	-	4057	8	novel_not_in_catalog	USP22	novel	5220	13	NA	NA	2666	-140	intron_retention	FALSE	canonical	1	3837	junction_7	528410.9964868681	NA	5	NA	TRUE	NA	NA	NA	C	coding	128	387	377	763	15.0	4567	False	AATAAA	-23
PB.9756.20	chr6	+	5087	17	incomplete-splice_match	JARID2	ENST00000397311.4	5595	18	125259	401	125259	-382	5prime_fragment	FALSE	canonical	1	178449	junction_5	74253.86439562317	NA	13	NA	TRUE	NA	NA	NA	C	coding	1074	3225	475	3699	20.0	-9207	False	AATAAA	-26
PB.9756.23	chr6	+	4528	17	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-98689	-950	any annotated donor/acceptor	FALSE	canonical	1	184	junction_1	104104.45945342517	NA	3	NA	TRUE	NA	NA	NA	C	coding	1074	3225	484	3708	100.0	-25	False	NA	NA
PB.9756.22	chr6	+	3996	17	novel_not_in_catalog	JARID2	novel	5755	18	NA	NA	-100455	-1449	any annotated donor/acceptor	FALSE	canonical	1	5132	junction_1	103235.64753905791	NA	3	NA	TRUE	NA	NA	NA	C	coding	1208	3627	49	3675	25.0	-22	True	NA	NA
PB.4310.9	chr16	-	4316	16	novel_in_catalog	GGA2	novel	5973	17	NA	NA	-1	548	intron_retention	FALSE	canonical	1	350013	junction_15	126679.40728282908	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1581	1188	2768	30.0	0	True	CATAAA	-6
PB.9756.27	chr6	+	2467	10	incomplete-splice_match	JARID2	ENST00000397311.4	5595	18	255290	970	2787	-951	5prime_fragment	FALSE	canonical	1	248600	junction_7	55370.327866997184	NA	2	NA	TRUE	NA	NA	NA	C	coding	412	1239	410	1648	95.0	9710	False	NA	NA
PB.77.2	chr1	+	5134	24	novel_not_in_catalog	PIK3CD	novel	5483	25	NA	NA	-13	-8	intron_retention	FALSE	canonical	1	15896	junction_6	68396.08849241587	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	222	3269	60.0	-50	False	AGTAAA	-9
PB.12134.8	chrX	+	2761	5	incomplete-splice_match	TAF1	ENST00000492404.5	1249	9	30761	-1691	-3534	0	intron_retention	FALSE	canonical	1	59586	junction_1	42173.39721317219	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	93	803	30.0	NA	False	NA	NA
PB.12134.4	chrX	+	5157	24	novel_in_catalog	TAF1	novel	7722	39	NA	NA	-254	0	intron_retention	FALSE	canonical	1	3949	junction_5	35102.66066618014	NA	4	NA	TRUE	NA	NA	NA	C	coding	1050	3153	47	3199	30.0	NA	False	NA	NA
PB.12134.3	chrX	+	4525	29	incomplete-splice_match	TAF1	ENST00000276072.7	5692	38	-9	42676	-9	4633	3prime_fragment	FALSE	canonical	1	3949	junction_20	29833.616272296815	NA	0	NA	TRUE	NA	NA	NA	C	coding	1502	4506	20	4525	50.0	-64	True	NA	NA
PB.12134.2	chrX	+	7687	38	full-splice_match	TAF1	ENST00000276072.7	5692	38	-37	-1958	4	0	multi-exon	FALSE	canonical	1	3949	junction_20	36771.85724751609	NA	1	NA	TRUE	NA	NA	NA	C	coding	1893	5682	48	5729	30.0	-92	False	NA	NA
PB.12134.1	chrX	+	6418	38	full-splice_match	TAF1	ENST00000276072.7	5692	38	-67	-659	-1	392	multi-exon	FALSE	canonical	1	3949	junction_20	36771.85724751609	NA	0	NA	TRUE	NA	NA	NA	C	coding	1893	5682	78	5759	75.0	0	True	NA	NA
PB.1032.1	chr1	-	2309	10	full-splice_match	LAD1	ENST00000391967.6	2906	10	221	376	-78	-7	multi-exon	TRUE	canonical	1	125508	junction_8	122595.67369211972	NA	1	NA	TRUE	NA	NA	NA	A	coding	517	1554	82	1635	35.0	9777	False	NA	NA
PB.8263.7	chr3	+	2292	19	full-splice_match	TBC1D23	ENST00000394144.8	3677	19	-15	1400	-3	147	multi-exon	FALSE	canonical	1	204626	junction_4	40840.47812080317	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	23	2122	30.0	5	True	AGTAAA	-7
PB.4066.22	chr15	+	4395	36	novel_in_catalog	FANCI	novel	4713	37	NA	NA	-1	3	no_combination_of_known_junctions	FALSE	canonical	1	12005	junction_22	141223.01567987842	NA	2	1	TRUE	NA	NA	NA	C	coding	1213	3642	81	3722	15.0	28	True	AATAAA	-17
PB.4066.23	chr15	+	4839	39	novel_not_in_catalog	FANCI	novel	4713	37	NA	NA	1	2	any annotated donor/acceptor	FALSE	canonical	1	2715	junction_1	140846.45193953722	NA	1	NA	TRUE	NA	NA	NA	C	coding	1328	3987	181	4167	15.0	30	True	AATAAA	-16
PB.4066.20	chr15	+	6050	37	novel_in_catalog	FANCI	novel	4713	37	NA	NA	-7	3	intron_retention	FALSE	canonical	1	64977	junction_1	121248.24752442015	NA	2	1	TRUE	NA	NA	NA	C	coding	741	2226	3152	5377	15.0	18	True	AATAAA	-17
PB.4066.21	chr15	+	3846	37	novel_in_catalog	FANCI	novel	4713	37	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	16904	junction_23	141631.60637316032	NA	16	1	TRUE	NA	NA	NA	C	coding	1262	3786	61	3846	75.0	25	True	NA	NA
PB.3909.2	chr15	+	1998	8	novel_in_catalog	TPM1	novel	1295	10	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	1	331679	junction_1	2794074.415360362	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	122	868	30.0	-34	True	ATTAAA	-24
PB.4066.27	chr15	+	3754	34	novel_in_catalog	FANCI	novel	4713	37	NA	NA	5	-7136	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	140293.55618571423	NA	4	2	TRUE	NA	NA	NA	C	coding	1190	3570	183	3752	55.0	43	True	NA	NA
PB.4066.24	chr15	+	4736	38	novel_in_catalog	FANCI	novel	4713	37	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	64977	junction_1	123086.08619690123	NA	2	1	TRUE	NA	NA	NA	C	coding	1328	3987	78	4064	15.0	31	True	AATAAA	-16
PB.4066.25	chr15	+	3986	37	novel_in_catalog	FANCI	novel	4713	37	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	3346	junction_10	139667.10931253334	NA	3	1	TRUE	NA	NA	NA	C	coding	1297	3894	71	3964	10.0	38	True	AATAAA	-22
PB.3667.15	chr14	+	2741	11	incomplete-splice_match	PPP2R5C	ENST00000445439.7	1526	12	-28	1523	1	-1498	3prime_fragment	FALSE	canonical	1	460	junction_5	233106.06898225538	NA	2	NA	TRUE	NA	NA	NA	C	coding	408	1227	107	1333	90.0	1	True	NA	NA
PB.7098.4	chr2	-	4373	8	novel_in_catalog	NDUFA10	novel	662	6	NA	NA	-11	0	intron_retention	FALSE	canonical	1	9110	junction_7	500681.09830978623	NA	1	NA	TRUE	NA	NA	NA	C	coding	129	390	3607	3996	20.0	-25	True	AATAAA	-15
PB.3686.2	chr14	+	2242	5	full-splice_match	APOPT1	ENST00000477116.5	906	5	24	-1360	7	-301	multi-exon	FALSE	canonical	1	43636	junction_1	190622.22446110527	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	3	True	AATAAA	-14
PB.7597.2	chr22	+	1895	1	full-splice_match	LINC00528	ENST00000600723.1	2160	1	233	32	233	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	164	495	1	495	85.0	-4433	False	NA	NA
PB.7597.1	chr22	+	1722	1	full-splice_match	LINC00528	ENST00000600723.1	2160	1	233	205	233	-205	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	164	495	1	495	80.0	-4433	False	NA	NA
PB.3686.1	chr14	+	1219	5	full-splice_match	APOPT1	ENST00000409074.6	2523	5	6	1298	3	269	multi-exon	FALSE	canonical	1	282908	junction_1	89592.89723242573	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	35	616	45.0	0	True	AATAAA	-10
PB.2093.9	chr11	+	3137	4	novel_not_in_catalog	RBM14-RBM4	novel	1566	3	NA	NA	22014	21906	any annotated donor/acceptor	FALSE	canonical	1	28553	junction_3	537658.8961298377	NA	3	NA	TRUE	NA	NA	NA	B	coding	151	456	82	537	30.0	-22	True	ATTAAA	-15
PB.2093.8	chr11	+	1510	2	full-splice_match	RBM4	ENST00000483858.5	1548	2	-3	41	-3	-41	multi-exon	FALSE	canonical	1	1171671	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	71	604	80.0	-11	True	AAAAAG	-37
PB.2093.1	chr11	+	3529	4	novel_not_in_catalog	RBM14	novel	2828	3	NA	NA	15	41028	any annotated donor/acceptor	FALSE	canonical	1	28553	junction_3	36376.63648552461	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	474	929	30.0	-9019	False	ATTAAA	-15
PB.2093.3	chr11	+	3395	3	novel_in_catalog	RBM14	novel	2828	3	NA	NA	-16	41031	no_combination_of_known_junctions	FALSE	canonical	1	63414	junction_2	22378.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	461	982	20.0	-20	True	ATTAAA	-18
PB.2093.2	chr11	+	1910	2	incomplete-splice_match	RBM14-RBM4	ENST00000421355.1	2034	3	-31	3481	-26	2498	3prime_fragment	FALSE	canonical	1	108170	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	177	534	471	1004	80.0	-9016	False	AAAAAG	-37
PB.2093.5	chr11	+	1989	4	novel_in_catalog	RBM14	novel	2828	3	NA	NA	0	19121	intron_retention	TRUE	canonical	1	108170	junction_1	541865.8150959106	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	445	1539	10.0	-4	True	AATAAA	-16
PB.2093.4	chr11	+	2643	3	full-splice_match	RBM14	ENST00000310137.4	2828	3	178	7	45	-3	multi-exon	FALSE	canonical	1	468495	junction_1	37135.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	641	1926	46	1971	20.0	-8856	False	AATAAA	-24
PB.2093.7	chr11	+	1780	4	full-splice_match	RBM4	ENST00000408993.6	1763	4	-3	-14	2	-1	multi-exon	FALSE	canonical	1	200724	junction_1	498255.7705081464	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	238	1332	10.0	2	True	AATAAA	-14
PB.2093.6	chr11	+	2483	1	novel_in_catalog	RBM14-RBM4	novel	1566	3	NA	NA	21999	2498	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	177	534	1044	1577	80.0	2	True	AAAAAG	-37
PB.3832.1	chr15	+	3197	9	novel_in_catalog	EIF3J	novel	2569	8	NA	NA	-6	1604	intron_retention	FALSE	canonical	1	34349	junction_8	384621.90533878526	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	145	921	30.0	-2701	False	ATTAAA	-17
PB.3832.3	chr15	+	3060	8	full-splice_match	EIF3J	ENST00000261868.9	2569	8	34	-525	34	299	multi-exon	FALSE	canonical	1	203889	junction_5	353343.4302879756	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	105	881	20.0	-28	True	GATAAA	-19
PB.3832.2	chr15	+	2406	7	full-splice_match	EIF3J	ENST00000535391.5	925	7	-128	-1353	-2	-3	multi-exon	FALSE	canonical	1	9246	junction_5	402088.080136264	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	141	755	30.0	-2697	False	ATTAAA	-15
PB.3832.5	chr15	+	4272	8	full-splice_match	EIF3J	ENST00000261868.9	2569	8	85	-1788	17	1562	multi-exon	FALSE	canonical	1	203889	junction_5	353343.4302879756	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	54	830	30.0	-29	True	AATATA	-22
PB.3832.4	chr15	+	2405	8	full-splice_match	EIF3J	ENST00000261868.9	2569	8	162	2	36	-2	multi-exon	FALSE	canonical	1	203889	junction_5	353343.4302879756	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	418	753	30.0	-2533	False	ATTAAA	-16
PB.3832.7	chr15	+	1791	8	full-splice_match	EIF3J	ENST00000261868.9	2569	8	62	716	-6	88	multi-exon	FALSE	canonical	1	203889	junction_5	353343.4302879756	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	77	853	25.0	0	True	AATAAA	-21
PB.3832.6	chr15	+	1917	8	full-splice_match	EIF3J	ENST00000261868.9	2569	8	61	591	-7	213	multi-exon	FALSE	canonical	1	203889	junction_5	353343.4302879756	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	777	78	854	20.0	-1	True	AATAAA	-31
PB.11617.4	chr9	-	4113	19	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	-242	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	104869.30797137483	NA	8	1	TRUE	NA	NA	NA	B	coding	445	1338	2266	3603	20.0	-1	True	AGTAAA	-13
PB.9790.1	chr6	-	1667	2	full-splice_match	HIST1H2BC	ENST00000314332.5	659	2	-16	-992	0	992	multi-exon	FALSE	canonical	1	86194	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	126	381	23	403	85.0	-1	True	NA	NA
PB.11617.6	chr9	-	3968	18	novel_in_catalog	TLE1	novel	3893	20	NA	NA	-302	-5	no_combination_of_known_junctions	FALSE	canonical	1	9123	junction_12	95840.96247855929	NA	0	NA	TRUE	NA	NA	NA	B	coding	696	2091	1368	3458	20.0	14	False	AGTAAA	-13
PB.6797.1	chr2	-	2747	8	novel_in_catalog	BAZ2B	novel	8058	36	NA	NA	-1206	-2	combination_of_known_junctions	FALSE	canonical	1	94887	junction_4	34126.14663155463	NA	0	NA	TRUE	NA	NA	NA	B	coding	411	1236	228	1463	25.0	NA	False	AATAAA	-16
PB.11617.1	chr9	-	4235	20	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	-242	-1	any annotated donor/acceptor	TRUE	canonical	0	0	junction_13	104378.76308806794	NA	3	1	TRUE	NA	NA	NA	B	coding	501	1506	2216	3721	5.0	-1	True	AGTAAA	-17
PB.11617.2	chr9	-	3512	19	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	375	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	98622.7471299592	NA	5	1	TRUE	NA	NA	NA	B	coding	467	1404	1599	3002	20.0	691	False	AGTAAA	-13
PB.11617.3	chr9	-	3204	19	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	-144	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	94978.45708850812	NA	5	2	TRUE	NA	NA	NA	B	coding	467	1404	1291	2694	20.0	1029	False	AGTAAA	-13
PB.11617.8	chr9	-	5546	18	novel_not_in_catalog	TLE1	novel	3893	20	NA	NA	-242	-5	intron_retention	FALSE	canonical	0	0	junction_11	101264.95697483007	NA	3	1	TRUE	NA	NA	NA	B	coding	424	1275	3762	5036	20.0	-1	True	AGTAAA	-13
PB.10385.9	chr7	-	2618	5	novel_not_in_catalog	RNF216	novel	5639	17	NA	NA	10134	-1144	any annotated donor/acceptor	FALSE	canonical	1	2201	junction_4	156300.88912475033	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	347	949	95.0	-7743	False	NA	NA
PB.9357.13	chr5	+	3264	18	novel_in_catalog	ERAP2	novel	5705	19	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	4027	junction_9	67651.9916341144	NA	0	NA	TRUE	NA	NA	NA	C	coding	931	2796	169	2964	100.0	0	True	NA	NA
PB.9357.12	chr5	+	3288	19	novel_not_in_catalog	ERAP2	novel	5705	19	NA	NA	0	12314	any annotated donor/acceptor	FALSE	canonical	1	631	junction_18	66504.82804874552	NA	27	2	TRUE	NA	NA	NA	C	coding	907	2724	169	2892	5.0	0	True	NA	NA
PB.9357.11	chr5	+	3453	20	novel_not_in_catalog	ERAP2	novel	5705	19	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	450	junction_18	77970.1196607835	NA	0	NA	TRUE	NA	NA	NA	C	coding	994	2985	169	3153	100.0	0	True	NA	NA
PB.9357.10	chr5	+	3748	15	incomplete-splice_match	ERAP2	ENST00000437043.7	5705	19	560	8709	-1	727	3prime_fragment	FALSE	canonical	1	69924	junction_1	45745.32893317177	NA	2	NA	TRUE	NA	NA	NA	C	coding	779	2340	170	2509	30.0	-1	True	TATAAA	-42
PB.9357.17	chr5	+	2524	15	incomplete-splice_match	ERAP2	ENST00000437043.7	5705	19	561	9932	0	-496	3prime_fragment	FALSE	canonical	1	69924	junction_1	45745.32893317177	NA	0	NA	TRUE	NA	NA	NA	C	coding	779	2340	169	2508	5.0	0	True	ATTAAA	-21
PB.9357.16	chr5	+	2968	18	incomplete-splice_match	ERAP2	ENST00000437043.7	5705	19	561	3868	0	-1	3prime_fragment	FALSE	canonical	1	69924	junction_1	48949.77932117463	NA	0	NA	TRUE	NA	NA	NA	C	coding	918	2757	169	2925	25.0	0	True	AATAAA	-43
PB.9357.15	chr5	+	3170	19	full-splice_match	ERAP2	ENST00000437043.7	5705	19	561	1974	0	-163	multi-exon	FALSE	canonical	1	69924	junction_1	48164.5789465533	NA	14	NA	TRUE	NA	NA	NA	C	coding	954	2865	169	3033	65.0	0	True	NA	NA
PB.9357.14	chr5	+	3196	18	full-splice_match	ERAP2	ENST00000379904.8	3219	18	-4	27	2	0	multi-exon	FALSE	canonical	1	6376	junction_3	67726.38628356854	NA	0	NA	TRUE	NA	NA	NA	C	coding	909	2730	167	2896	100.0	2	True	NA	NA
PB.4105.7	chr15	+	3359	11	novel_not_in_catalog	MEF2A	novel	732	4	NA	NA	0	397	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	95179.09976045162	NA	29	1	TRUE	NA	NA	NA	C	coding	471	1416	536	1951	50.0	-23	True	CATAAA	-13
PB.11172.2	chr8	-	6873	39	full-splice_match	ARFGEF1	ENST00000262215.7	7225	39	327	25	327	0	multi-exon	TRUE	canonical	1	146604	junction_29	47356.15455676729	NA	18	NA	TRUE	NA	NA	NA	C	coding	1840	5523	91	5613	40.0	-13	True	AATAAA	-17
PB.4105.4	chr15	+	3069	12	novel_in_catalog	MEF2A	novel	732	4	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	1	10613	junction_11	94543.51830368738	NA	1	NA	TRUE	NA	NA	NA	C	coding	374	1125	945	2069	45.0	-35	True	AATAAA	-22
PB.11226.11	chr8	-	4367	16	novel_in_catalog	NBN	novel	4666	16	NA	NA	-1	-2	no_combination_of_known_junctions	FALSE	canonical	1	1152	junction_13	173239.3170606103	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	460	2271	15.0	0	True	NA	NA
PB.1735.3	chr11	+	2995	11	novel_in_catalog	PSMD13	novel	1991	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	593850	junction_3	531595.2120571065	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	2132	2611	0.0	-3	True	AATAAA	-19
PB.1735.2	chr11	+	2917	12	novel_in_catalog	PSMD13	novel	1991	13	NA	NA	-5	0	intron_retention	FALSE	canonical	1	593850	junction_3	533626.5819274005	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	2057	2536	0.0	-4	True	AATAAA	-16
PB.1735.1	chr11	+	1559	12	full-splice_match	PSMD13	ENST00000382671.8	1489	12	-67	-3	5	0	multi-exon	FALSE	canonical	1	7071	junction_2	628370.0109537899	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	303	1175	0.0	-5	True	AATAAA	-19
PB.12296.4	chrX	-	6431	30	novel_not_in_catalog	ATP11C	novel	6924	29	NA	NA	45	-2	any annotated donor/acceptor	FALSE	canonical	1	3364	junction_29	42670.20348527102	NA	0	NA	TRUE	NA	NA	NA	B	coding	860	2583	1238	3820	25.0	1	True	AATAAA	-14
PB.11786.6	chr9	-	3933	23	full-splice_match	GOLGA1	ENST00000373555.8	4811	23	6	872	6	-851	multi-exon	FALSE	canonical	1	35466	junction_22	33064.83347124865	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	329	2632	70.0	-17	True	NA	NA
PB.1735.5	chr11	+	1669	12	full-splice_match	PSMD13	ENST00000525665.5	1632	12	-23	-14	0	-1	multi-exon	FALSE	canonical	1	909493	junction_1	458515.4431144384	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	234	1289	0.0	1	True	AATAAA	-15
PB.1735.4	chr11	+	1588	13	full-splice_match	PSMD13	ENST00000532097.5	1991	13	431	-28	0	0	multi-exon	FALSE	canonical	1	593850	junction_3	514249.55215965887	NA	1	NA	TRUE	NA	NA	NA	C	coding	376	1131	74	1204	0.0	1	True	AATAAA	-19
PB.12296.9	chrX	-	2291	20	novel_not_in_catalog	ATP11C	novel	6924	29	NA	NA	43	7767	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	49227.74187048996	NA	0	NA	TRUE	NA	NA	NA	B	coding	705	2115	176	2290	65.0	-1	True	NA	NA
PB.11786.8	chr9	-	3972	23	novel_not_in_catalog	GOLGA1	novel	4811	23	NA	NA	98	-851	any annotated donor/acceptor	FALSE	canonical	1	23001	junction_22	34975.84042362446	NA	1	NA	TRUE	NA	NA	NA	C	coding	767	2304	368	2671	70.0	-9	True	NA	NA
PB.3294.5	chr14	+	2985	9	novel_in_catalog	METTL17	novel	1749	14	NA	NA	1	2	intron_retention	FALSE	canonical	1	333478	junction_1	154622.36507455836	NA	1	NA	TRUE	NA	NA	NA	C	coding	119	360	349	708	20.0	1	True	AATAAA	-21
PB.11607.3	chr9	-	3865	8	full-splice_match	CARNMT1	ENST00000376834.7	4130	8	262	3	262	-3	multi-exon	FALSE	canonical	1	91040	junction_5	23891.298567999736	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	129	1121	25.0	342	False	ATTAAA	-18
PB.7279.8	chr20	+	2271	18	novel_in_catalog	RPN2	novel	791	6	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	137257	junction_17	1075572.2396094997	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	26	1969	40.0	2	True	AATAAA	-16
PB.11607.1	chr9	-	4282	8	full-splice_match	CARNMT1	ENST00000376834.7	4130	8	70	-222	70	222	multi-exon	FALSE	canonical	1	91040	junction_5	23891.298567999736	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	84	1313	45.0	-32	True	AATAAA	-18
PB.3294.4	chr14	+	2609	12	novel_in_catalog	METTL17	novel	1749	14	NA	NA	0	-2	intron_retention	FALSE	canonical	1	210063	junction_3	217467.8187232491	NA	2	NA	TRUE	NA	NA	NA	C	coding	191	576	1891	2466	20.0	0	True	AATAAA	-22
PB.11607.7	chr9	-	4042	8	novel_not_in_catalog	CARNMT1	novel	4130	8	NA	NA	560	-3	any annotated donor/acceptor	FALSE	canonical	1	2505	junction_7	52608.766335535176	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	306	1298	25.0	640	False	ATTAAA	-18
PB.11607.6	chr9	-	4125	9	novel_not_in_catalog	CARNMT1	novel	4130	8	NA	NA	101	-3	any annotated donor/acceptor	FALSE	canonical	1	1676	junction_8	59649.652855103646	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	389	1381	25.0	-1	True	ATTAAA	-18
PB.11607.5	chr9	-	4358	9	novel_not_in_catalog	CARNMT1	novel	4130	8	NA	NA	-96	-3	any annotated donor/acceptor	FALSE	canonical	1	114	junction_3	62004.06723037913	NA	3	NA	TRUE	NA	NA	NA	C	coding	415	1248	81	1328	25.0	-45	False	ATTAAA	-18
PB.7279.9	chr20	+	2056	18	novel_in_catalog	RPN2	novel	791	6	NA	NA	-2	-19	combination_of_known_junctions	FALSE	canonical	1	52005	junction_4	1107201.111965369	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	30	1973	65.0	-2	True	AAGAAA	-40
PB.3481.7	chr14	-	3118	4	novel_in_catalog	TRMT5	novel	5573	5	NA	NA	-28	-3563	intron_retention	FALSE	canonical	1	88258	junction_3	65305.853052302205	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	107	922	15.0	-20	True	AATAAA	-26
PB.3294.3	chr14	+	2866	11	novel_in_catalog	METTL17	novel	1749	14	NA	NA	0	-2	intron_retention	FALSE	canonical	1	210063	junction_3	201334.16677158896	NA	0	NA	TRUE	NA	NA	NA	C	coding	158	477	24	500	20.0	0	True	AATAAA	-22
PB.3481.5	chr14	-	3376	3	novel_in_catalog	TRMT5	novel	5573	5	NA	NA	-5	-3562	intron_retention	FALSE	canonical	1	88258	junction_2	22065.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	84	899	20.0	3	True	AATAAA	-27
PB.3481.4	chr14	-	4483	2	novel_in_catalog	TRMT5	novel	5573	5	NA	NA	-36	-3562	intron_retention	FALSE	canonical	1	132389	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	1368	2006	20.0	-28	True	AATAAA	-27
PB.3342.4	chr14	-	2756	4	novel_in_catalog	PSME2	novel	496	2	NA	NA	-5	0	intron_retention	FALSE	canonical	1	542961	junction_2	271377.64064286667	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-2	True	AATAAA	-20
PB.3481.2	chr14	-	2265	5	full-splice_match	TRMT5	ENST00000261249.6	5573	5	279	3029	-28	-3029	multi-exon	FALSE	canonical	1	88258	junction_4	56556.83806800023	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	107	1636	25.0	-20	True	NA	NA
PB.3481.1	chr14	-	5307	5	full-splice_match	TRMT5	ENST00000261249.6	5573	5	264	2	-43	-2	multi-exon	FALSE	canonical	1	88258	junction_4	56556.83806800023	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	122	1651	60.0	-35	True	AATAAA	-18
PB.4467.24	chr16	-	7703	49	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	127808	junction_10	284659.0901542109	NA	2	NA	TRUE	NA	NA	NA	C	coding	2383	7152	278	7429	20.0	-5	True	AATACA	-24
PB.4214.2	chr16	-	2039	8	novel_not_in_catalog	TFAP4	novel	2215	7	NA	NA	-73	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	77239.2219459539	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	222	1238	10.0	-3	True	AATAAA	-21
PB.4214.3	chr16	-	2056	7	novel_not_in_catalog	TFAP4	novel	2215	7	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	2666	junction_1	81228.5287540994	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	154	1188	15.0	-17	True	AATAAA	-19
PB.5520.15	chr18	-	2788	20	novel_not_in_catalog	RTTN	novel	8088	49	NA	NA	2406	-12120	any annotated donor/acceptor	FALSE	canonical	1	590	junction_19	17636.28168972517	NA	0	NA	TRUE	NA	NA	NA	C	coding	800	2400	388	2787	60.0	-2106	False	AATAGA	-33
PB.4214.1	chr16	-	2017	7	full-splice_match	TFAP4	ENST00000204517.10	2215	7	197	1	16	0	multi-exon	FALSE	canonical	1	94085	junction_2	47068.35829821228	NA	1	NA	TRUE	NA	NA	NA	C	coding	338	1017	133	1149	15.0	4	True	AATAAA	-19
PB.5520.13	chr18	-	4957	35	incomplete-splice_match	RTTN	ENST00000255674.11	6960	49	-33	61848	9	191	3prime_fragment	FALSE	canonical	1	43982	junction_16	11932.395758633611	NA	1	NA	TRUE	NA	NA	NA	C	coding	1596	4791	34	4824	30.0	-5	True	AATAAA	-18
PB.4467.27	chr16	-	7406	48	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-19	1	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_47	290068.3261526599	NA	1	NA	TRUE	NA	NA	NA	C	coding	2136	6411	743	7153	40.0	-41	False	AATACA	-3
PB.4214.4	chr16	-	2065	7	novel_not_in_catalog	TFAP4	novel	2215	7	NA	NA	-57	-1	any annotated donor/acceptor	FALSE	canonical	1	347	junction_3	83101.18145453102	NA	5	NA	TRUE	NA	NA	NA	C	coding	330	993	206	1198	15.0	13	True	AATAAA	-18
PB.5341.1	chr17	-	3363	19	novel_in_catalog	CCDC57	novel	513	2	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	31105	junction_5	33021.31264659721	NA	1	NA	TRUE	NA	NA	NA	A	coding	1027	3084	55	3138	10.0	-1	True	ATTAAA	-33
PB.7106.11	chr2	-	1759	4	full-splice_match	MTERF4	ENST00000391980.6	1637	4	15	-137	-3	137	multi-exon	FALSE	canonical	1	168828	junction_3	53118.23693317474	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	45	1190	25.0	-31	True	AGTAAA	-16
PB.1819.7	chr11	-	3699	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	116	-1	intron_retention	FALSE	canonical	1	43775	junction_20	2004696.367236866	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	943	2934	25.0	411	False	AATAAA	-19
PB.6847.4	chr2	-	1421	9	novel_in_catalog	CIR1	novel	1921	10	NA	NA	3	-486	no_combination_of_known_junctions	FALSE	canonical	1	165	junction_6	124632.3996664165	NA	1	1	TRUE	NA	NA	NA	B	coding	336	1008	413	1420	55.0	-33	True	ACTAAA	-8
PB.4467.26	chr16	-	7442	48	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-19	0	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_47	280445.0579409923	NA	0	NA	TRUE	NA	NA	NA	C	coding	2141	6426	743	7168	20.0	-41	False	AATACA	-24
PB.6847.2	chr2	-	1776	9	novel_in_catalog	CIR1	novel	1921	10	NA	NA	3	-131	no_combination_of_known_junctions	FALSE	canonical	1	165	junction_6	124632.3996664165	NA	1	1	TRUE	NA	NA	NA	B	coding	339	1020	413	1432	30.0	-33	True	ATTAAA	-17
PB.1819.3	chr11	-	3677	21	full-splice_match	EIF4G2	ENST00000396525.6	3346	21	-217	-114	-1	-2	multi-exon	FALSE	canonical	1	1013607	junction_8	1624338.354514539	NA	21	4	TRUE	NA	NA	NA	C	coding	663	1992	926	2917	15.0	0	True	AATAAA	-14
PB.1819.1	chr11	-	4030	22	full-splice_match	EIF4G2	ENST00000339995.9	3978	22	185	-237	-1	233	multi-exon	FALSE	canonical	1	3229390	junction_21	1119405.3991834996	NA	2	NA	TRUE	NA	NA	NA	C	coding	701	2106	926	3031	45.0	0	True	TATAAA	-15
PB.3100.10	chr13	-	3740	15	novel_not_in_catalog	STARD13	novel	5917	14	NA	NA	-1	-2077	any annotated donor/acceptor	FALSE	canonical	1	475	junction_13	38419.732745620415	NA	0	NA	TRUE	NA	NA	NA	C	coding	995	2988	407	3394	25.0	16	True	NA	NA
PB.3917.2	chr15	-	3341	4	full-splice_match	CIAO2A	ENST00000559950.1	561	4	59	-2839	-3	-1	multi-exon	FALSE	canonical	1	452374	junction_3	84638.2824980648	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	31	423	30.0	-4	True	AATAAA	-17
PB.3917.1	chr15	-	1029	5	full-splice_match	CIAO2A	ENST00000300030.7	1105	5	69	7	69	-1	multi-exon	FALSE	canonical	1	452374	junction_4	219873.12751277725	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	182	664	30.0	-17	True	AATAAA	-17
PB.3342.3	chr14	-	2943	3	novel_in_catalog	PSME2	novel	496	2	NA	NA	-5	0	intron_retention	FALSE	canonical	1	497935	junction_1	184922.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-2	True	AATAAA	-20
PB.11448.3	chr9	-	3515	2	full-splice_match	RANBP6	ENST00000623170.1	704	2	10	-2821	3	-2	multi-exon	FALSE	canonical	1	3526	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	753	2262	9	2270	10.0	-1	True	NA	NA
PB.10557.4	chr7	+	1852	8	full-splice_match	SUMF2	ENST00000423763.5	1792	8	-27	-33	-3	1	multi-exon	FALSE	canonical	1	44301	junction_4	424635.3831426367	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	39	536	15.0	-34	True	NA	NA
PB.10557.5	chr7	+	2169	9	novel_in_catalog	SUMF2	novel	1683	8	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	17765	junction_8	398021.28562105505	NA	7	NA	TRUE	NA	NA	NA	C	coding	299	900	38	937	20.0	-33	True	NA	NA
PB.10557.6	chr7	+	2096	10	novel_not_in_catalog	SUMF2	novel	1683	8	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	16598	junction_8	480207.3996230852	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	36	1298	20.0	-31	True	NA	NA
PB.5950.1	chr19	+	2023	4	novel_not_in_catalog	ZNF529-AS1	novel	1033	5	NA	NA	-10	3938	any annotated donor/acceptor	FALSE	canonical	1	8637	junction_3	17172.72885193912	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	-2	True	NA	NA
PB.10557.1	chr7	+	2111	10	novel_not_in_catalog	SUMF2	novel	1683	8	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	3654	junction_9	490926.32385363535	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	90	989	20.0	-85	False	NA	NA
PB.10557.2	chr7	+	2129	10	full-splice_match	SUMF2	ENST00000413756.5	1171	10	-25	-933	-1	0	multi-exon	FALSE	canonical	1	36740	junction_8	476091.5161921065	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	49	1107	20.0	-44	True	NA	NA
PB.10557.3	chr7	+	1579	9	full-splice_match	SUMF2	ENST00000434526.6	2052	9	41	432	0	51	multi-exon	FALSE	canonical	1	1003112	junction_3	139764.32241450023	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	48	953	40.0	-43	True	NA	NA
PB.3898.11	chr15	-	1354	11	full-splice_match	SLTM	ENST00000249736.11	1373	11	0	19	0	12	multi-exon	FALSE	canonical	1	108875	junction_5	177801.60229210535	NA	2	2	TRUE	NA	NA	NA	C	coding	446	1338	15	1352	65.0	19	True	NA	NA
PB.3898.10	chr15	-	1409	11	incomplete-splice_match	SLTM	ENST00000380516.6	4147	21	74	15131	0	13	3prime_fragment	FALSE	canonical	1	238674	junction_5	144861.65964812774	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1395	15	1409	70.0	19	True	NA	NA
PB.3218.20	chr13	-	4348	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	94	-498	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	90831.2915691638	NA	2	NA	TRUE	NA	NA	NA	C	coding	463	1392	321	1712	15.0	7	True	AATAAA	-16
PB.3218.21	chr13	-	6563	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	91	-497	intron_retention	FALSE	canonical	1	221288	junction_2	18760.581722945943	NA	3	NA	TRUE	NA	NA	NA	C	coding	203	612	3359	3970	15.0	4	True	AATAAA	-17
PB.3218.27	chr13	-	3136	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	91	-498	any annotated donor/acceptor	FALSE	canonical	1	646	junction_1	90630.6144236942	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	324	1718	15.0	4	True	AATAAA	-16
PB.3218.24	chr13	-	3510	6	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	1365	-497	any annotated donor/acceptor	FALSE	canonical	1	81	junction_1	102494.50434359883	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	271	738	15.0	2293	False	AATAAA	-17
PB.3218.28	chr13	-	3105	8	novel_not_in_catalog	DCT	novel	5064	8	NA	NA	-1	-497	any annotated donor/acceptor	FALSE	canonical	1	677	junction_1	90620.98741056239	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	429	1829	15.0	-2	True	AATAAA	-17
PB.1721.1	chr10	+	1951	11	full-splice_match	LRRC27	ENST00000368614.7	6374	11	-44	4467	1	-4	multi-exon	FALSE	canonical	1	38599	junction_1	13562.92667679067	NA	0	NA	TRUE	NA	NA	NA	A	coding	530	1593	150	1742	10.0	-37	True	ATTAAA	-11
PB.11525.5	chr9	-	1653	9	full-splice_match	ARHGEF39	ENST00000378387.3	3769	9	19	2097	19	78	multi-exon	FALSE	canonical	1	67143	junction_8	21102.131502232187	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	100	1107	20.0	-77	False	AGTAAA	-18
PB.6942.7	chr2	+	2749	10	novel_in_catalog	CFLAR	novel	14672	10	NA	NA	52	7	combination_of_known_junctions	FALSE	canonical	1	85656	junction_9	227511.00513948826	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	324	1712	5.0	0	True	NA	NA
PB.7279.7	chr20	+	3244	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	2	-19	intron_retention	FALSE	canonical	1	1567056	junction_1	547596.4597232122	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	38	1543	65.0	-10	True	AAGAAA	-40
PB.11152.7	chr8	-	5227	24	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	284930	junction_17	767518.8433913883	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	206	2425	15.0	15	True	AATAAA	-18
PB.707.2	chr1	+	3524	1	full-splice_match	HIST2H2BD	ENST00000608318.2	3612	1	87	1	-79	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	164	495	78	572	35.0	-9646	False	AATAAA	-22
PB.7306.9	chr20	-	4225	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-5	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	441687.32483586925	NA	6	NA	TRUE	NA	NA	NA	C	coding	418	1257	122	1378	35.0	-11	True	NA	NA
PB.11024.1	chr8	+	3677	21	full-splice_match	CCAR2	ENST00000308511.8	4853	21	125	1051	-6	-5	multi-exon	FALSE	canonical	1	515343	junction_11	111881.74101407254	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	125	2896	45.0	0	True	AATAAA	-10
PB.11045.2	chr8	-	2928	2	full-splice_match	SDAD1P1	ENST00000519902.1	3174	2	-25	271	-25	-138	multi-exon	FALSE	canonical	1	9521	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	2132	2668	75.0	-1	True	AAGAAA	-27
PB.7306.3	chr20	-	4374	10	full-splice_match	SERINC3	ENST00000342374.4	4445	10	34	37	10	-37	multi-exon	FALSE	canonical	1	754634	junction_9	257493.3824904925	NA	2	NA	TRUE	NA	NA	NA	C	coding	473	1422	125	1546	30.0	-27	True	NA	NA
PB.7306.2	chr20	-	4491	11	novel_in_catalog	SERINC3	novel	812	5	NA	NA	-6	-8	combination_of_known_junctions	TRUE	canonical	1	5178	junction_10	531899.8068935634	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	378	1634	45.0	-12	True	NA	NA
PB.7306.1	chr20	-	1709	11	full-splice_match	SERINC3	ENST00000255175.5	1726	11	23	-6	-8	3	multi-exon	FALSE	canonical	1	26202	junction_1	425424.6363396107	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	112	1533	20.0	-14	True	ATTAAA	-19
PB.11881.6	chr9	-	2780	5	full-splice_match	SURF4	ENST00000545297.5	2863	5	68	15	1	-15	multi-exon	FALSE	canonical	1	24365	junction_1	861588.2055542833	NA	1	NA	TRUE	NA	NA	NA	C	coding	128	387	130	516	25.0	0	True	AATAAA	-17
PB.7306.5	chr20	-	5683	10	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	8	-11	any annotated donor/acceptor	FALSE	canonical	1	16545	junction_2	450054.38779132266	NA	1	NA	TRUE	NA	NA	NA	C	coding	366	1101	127	1227	40.0	-29	True	NA	NA
PB.7306.4	chr20	-	4363	11	novel_not_in_catalog	SERINC3	novel	812	5	NA	NA	-8	-11	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_9	431883.8031163128	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	187	1509	40.0	-45	True	NA	NA
PB.3907.1	chr15	-	3746	2	full-splice_match	RORA	ENST00000558234.1	3910	2	-9	173	-9	-173	multi-exon	FALSE	canonical	1	53120	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.707.1	chr1	+	1863	1	full-splice_match	HIST2H2BD	ENST00000369385.5	493	1	-102	-1268	64	1268	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	164	495	101	595	90.0	-9669	False	NA	NA
PB.12093.2	chrX	-	3871	20	novel_not_in_catalog	HUWE1	novel	4805	18	NA	NA	-9203	-693	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	380404.87279275345	NA	0	NA	TRUE	NA	NA	NA	B	coding	1085	3258	96	3353	25.0	NA	False	AATAAA	-19
PB.2460.31	chr12	+	3025	3	incomplete-splice_match	CLEC2D	ENST00000543300.5	399	4	7	4040	7	-2122	3prime_fragment	FALSE	canonical	1	223788	junction_1	68510.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	80	243	120	362	80.0	-6	True	NA	NA
PB.2460.30	chr12	+	1987	4	full-splice_match	CLEC2D	ENST00000543300.5	399	4	-18	-1570	0	554	multi-exon	FALSE	canonical	1	15605	junction_3	141923.57784933256	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1191	1847	40.0	0	True	GATAAA	-22
PB.2460.33	chr12	+	1989	6	novel_not_in_catalog	CLEC2D	novel	571	4	NA	NA	464	-1	intron_retention	FALSE	canonical	1	1897	junction_1	136621.0957976842	NA	1	NA	TRUE	NA	NA	NA	C	coding	80	243	153	395	25.0	-1	True	NA	NA
PB.2460.32	chr12	+	2467	6	full-splice_match	CLEC2D	ENST00000261340.11	935	6	31	-1563	9	875	multi-exon	FALSE	canonical	1	74366	junction_5	105211.63052628735	NA	2	NA	TRUE	NA	NA	NA	C	coding	218	657	1350	2006	75.0	-4	True	NA	NA
PB.3688.1	chr14	-	2567	10	full-splice_match	XRCC3	ENST00000555055.5	2584	10	19	-2	-7	1	multi-exon	FALSE	canonical	1	14405	junction_9	67471.71202807885	NA	1	1	TRUE	NA	NA	NA	C	coding	346	1041	345	1385	10.0	0	True	NA	NA
PB.3688.2	chr14	-	2620	9	novel_in_catalog	XRCC3	novel	2539	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	8787	junction_8	72076.8983274114	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	400	1440	15.0	-18	True	NA	NA
PB.1786.3	chr11	-	2665	14	full-splice_match	APBB1	ENST00000299402.10	2636	14	-29	0	-10	0	multi-exon	FALSE	canonical	1	280042	junction_6	158780.724714432	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	130	2256	5.0	-32	True	AATAAA	-16
PB.7817.1	chr22	+	2651	18	full-splice_match	ACO2	ENST00000216254.8	2741	18	-8	98	-8	-98	multi-exon	FALSE	canonical	1	209990	junction_8	427903.9727111599	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	31	2373	15.0	0	True	NA	NA
PB.5581.1	chr19	+	2056	8	incomplete-splice_match	CSNK1G2	ENST00000255641.12	2918	12	37454	28	128	-28	5prime_fragment	FALSE	canonical	1	598907	junction_2	154560.82043965603	NA	2	NA	TRUE	NA	NA	NA	B	coding	299	900	50	949	80.0	NA	False	GGGGCT	-6
PB.5581.2	chr19	+	2026	7	novel_in_catalog	CSNK1G2	novel	2918	12	NA	NA	227	-28	intron_retention	FALSE	canonical	1	639196	junction_5	135557.16230155455	NA	0	NA	TRUE	NA	NA	NA	B	coding	175	528	392	919	80.0	NA	False	GGGGCT	-6
PB.9098.2	chr4	+	1813	4	novel_in_catalog	ANKRD37	novel	649	3	NA	NA	-16	-6	intron_retention	FALSE	canonical	1	424459	junction_1	22035.290377029298	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	2	424	40.0	0	True	ATTAAA	-10
PB.9957.16	chr6	+	2697	6	novel_in_catalog	SRSF3	novel	595	5	NA	NA	-3	0	intron_retention	FALSE	canonical	1	425361	junction_3	994825.0003442817	NA	0	NA	TRUE	NA	NA	NA	C	coding	128	387	121	507	25.0	2	True	ATTAAA	-20
PB.3222.19	chr13	-	3108	21	full-splice_match	ABCC4	ENST00000629385.1	2903	21	-32	-173	-3	-2	multi-exon	FALSE	canonical	1	26108	junction_1	73140.87587696774	NA	0	NA	TRUE	NA	NA	NA	C	coding	859	2580	165	2744	15.0	-42	True	CATAAA	-18
PB.1786.4	chr11	-	2921	2	incomplete-splice_match	APBB1	ENST00000299402.10	2636	14	5	13397	5	-5203	3prime_fragment	FALSE	canonical	1	285557	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	253	762	96	857	85.0	2	True	NA	NA
PB.6121.3	chr19	+	3268	6	incomplete-splice_match	SPHK2	ENST00000598088.5	2866	7	0	1	0	-1	intron_retention	FALSE	canonical	1	40333	junction_1	73951.23610163659	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	270	1145	10.0	0	True	AATAAA	-22
PB.246.8	chr1	-	1494	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16527	-56748	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	395626.4174317596	NA	1	NA	TRUE	NA	NA	NA	B	coding	167	504	800	1303	75.0	-1	True	AATAAA	-7
PB.246.9	chr1	-	1429	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16524	-56748	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	395626.4174317596	NA	0	NA	TRUE	NA	NA	NA	B	coding	167	504	735	1238	75.0	2	True	AATAAA	-7
PB.2494.8	chr12	+	4001	23	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-38	0	no_combination_of_known_junctions	FALSE	canonical	1	744	junction_12	61572.76585594337	NA	9	NA	TRUE	NA	NA	NA	C	coding	958	2877	247	3123	35.0	-44	True	AATAAA	-14
PB.2494.9	chr12	+	3278	11	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-28	359	combination_of_known_junctions	FALSE	canonical	1	669	junction_10	69603.95254437783	NA	0	NA	TRUE	NA	NA	NA	C	coding	542	1629	237	1865	75.0	-34	True	AAGAAA	-26
PB.2494.6	chr12	+	4072	24	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-38	0	any annotated donor/acceptor	FALSE	canonical	1	295	junction_1	51632.26077580194	NA	0	NA	TRUE	NA	NA	NA	C	coding	1008	3027	168	3194	35.0	-44	True	AATAAA	-14
PB.2494.7	chr12	+	4135	24	novel_not_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-36	1	any annotated donor/acceptor	FALSE	canonical	1	7970	junction_15	60843.56965931954	NA	1	NA	TRUE	NA	NA	NA	C	coding	1003	3012	245	3256	30.0	-42	True	AATAAA	-15
PB.2494.4	chr12	+	2880	10	incomplete-splice_match	PLEKHA5	ENST00000536974.5	3139	22	-51	73006	-51	-18904	3prime_fragment	FALSE	canonical	1	9953	junction_1	55670.92887563979	NA	3	NA	TRUE	NA	NA	NA	C	coding	530	1593	260	1852	15.0	-57	False	GATAAA	-17
PB.2494.5	chr12	+	4127	24	novel_in_catalog	PLEKHA5	novel	4762	32	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	9953	junction_1	50216.73574309536	NA	1	NA	TRUE	NA	NA	NA	C	coding	1008	3027	222	3248	30.0	-19	True	AATAAA	-15
PB.2494.2	chr12	+	2044	12	incomplete-splice_match	PLEKHA5	ENST00000536974.5	3139	22	-86	39187	-86	815	3prime_fragment	FALSE	canonical	1	9953	junction_1	50427.729211923426	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	295	2001	45.0	-92	False	AGTAAA	-13
PB.2494.3	chr12	+	1858	9	incomplete-splice_match	PLEKHA5	ENST00000536974.5	3139	22	-83	77787	-83	18058	3prime_fragment	FALSE	canonical	1	9953	junction_1	59032.876676766944	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	292	1737	75.0	-89	False	GATAAA	-28
PB.246.4	chr1	-	1902	7	novel_not_in_catalog	AL136115.2	novel	587	2	NA	NA	-16517	-56341	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_6	395626.4174317596	NA	0	NA	TRUE	NA	NA	NA	B	coding	167	504	801	1304	90.0	9	True	NA	NA
PB.2494.1	chr12	+	4084	26	full-splice_match	PLEKHA5	ENST00000299275.10	4238	26	-98	252	-56	-249	multi-exon	FALSE	canonical	1	120019	junction_2	39131.489637763596	NA	0	NA	TRUE	NA	NA	NA	C	coding	1116	3351	105	3455	85.0	1	True	NA	NA
PB.8482.5	chr3	-	3777	6	full-splice_match	SLC33A1	ENST00000643144.1	3749	6	-29	1	-6	-1	multi-exon	FALSE	canonical	1	192471	junction_5	35322.58717817821	NA	18	1	TRUE	NA	NA	NA	C	coding	549	1650	439	2088	35.0	20	False	AATAAA	-23
PB.8482.4	chr3	-	2414	7	full-splice_match	SLC33A1	ENST00000359479.7	2404	7	2	-12	2	6	multi-exon	FALSE	canonical	1	35933	junction_1	81737.85761760989	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	431	2080	30.0	-22	True	AATAAA	-30
PB.8482.7	chr3	-	3586	5	full-splice_match	SLC33A1	ENST00000644094.1	2546	5	-179	-861	0	-1	multi-exon	FALSE	canonical	1	7060	junction_3	107132.67949224224	NA	2	NA	TRUE	NA	NA	NA	C	coding	336	1011	433	1443	35.0	-24	True	AATAAA	-23
PB.8482.6	chr3	-	2219	6	novel_in_catalog	AC104472.3	novel	3746	10	NA	NA	20	-63476	intron_retention	FALSE	canonical	1	7060	junction_4	111741.41410166599	NA	6	NA	TRUE	NA	NA	NA	B	coding	336	1011	426	1436	30.0	-17	True	AATAAA	-25
PB.8482.1	chr3	-	3782	8	novel_not_in_catalog	AC104472.3	novel	3746	10	NA	NA	-14	-61127	intron_retention	FALSE	non_canonical	0	0	junction_1	104002.67320995324	NA	8	NA	TRUE	NA	NA	NA	B	coding	549	1650	460	2109	40.0	-1	True	AATAAA	-17
PB.11597.16	chr9	+	3699	10	incomplete-splice_match	SMC5	ENST00000361138.6	5980	25	64519	16	-92	-16	5prime_fragment	FALSE	canonical	1	72883	junction_1	75084.54229733307	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	13	1158	10.0	-3147	False	AATAAA	-17
PB.8482.3	chr3	-	3470	4	full-splice_match	SLC33A1	ENST00000646424.1	2734	4	19	-755	2	6	multi-exon	FALSE	canonical	1	5525	junction_2	137178.43644036123	NA	1	NA	TRUE	NA	NA	NA	C	coding	447	1344	431	1774	30.0	-22	True	AATAAA	-30
PB.7265.8	chr20	-	2675	18	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	5	0	any annotated donor/acceptor	FALSE	canonical	1	4447	junction_17	492828.75346755155	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	212	1804	25.0	-10	True	AATAAA	-18
PB.9957.11	chr6	+	2737	6	novel_in_catalog	SRSF3	novel	595	5	NA	NA	-5	0	intron_retention	FALSE	canonical	1	532136	junction_3	969746.5231337517	NA	2	NA	TRUE	NA	NA	NA	C	coding	124	375	123	497	25.0	0	True	ATTAAA	-20
PB.7265.6	chr20	-	2747	19	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	4447	junction_18	476347.6255882674	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	755	1876	25.0	-9	True	AATAAA	-18
PB.6998.6	chr2	-	6126	4	full-splice_match	IGFBP5	ENST00000233813.4	6215	4	-24	113	-24	-113	multi-exon	FALSE	canonical	1	1164042	junction_1	246571.22485805192	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	775	1593	45.0	-3	True	AATAAA	-29
PB.7265.4	chr20	-	3727	19	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	50146	junction_15	508118.4065533949	NA	1	NA	TRUE	NA	NA	NA	C	coding	373	1122	1735	2856	25.0	38	True	AATAAA	-18
PB.7265.3	chr20	-	4354	17	novel_in_catalog	RBM39	novel	5914	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	212934	junction_1	407812.16024540924	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	2380	3483	25.0	4	True	AATAAA	-18
PB.4088.2	chr15	+	5468	13	full-splice_match	SV2B	ENST00000394232.5	11279	13	-91	5902	-91	122	multi-exon	FALSE	canonical	1	25615	junction_1	19280.455853265557	NA	1	NA	TRUE	NA	NA	NA	C	coding	683	2052	562	2613	45.0	-1623	False	AATAAA	-10
PB.4088.1	chr15	+	5273	13	full-splice_match	SV2B	ENST00000394232.5	11279	13	-23	6029	-23	-5	multi-exon	FALSE	canonical	1	25615	junction_1	19280.455853265557	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	494	2545	25.0	-19	True	ATTAAA	-12
PB.6121.2	chr19	+	3226	6	incomplete-splice_match	SPHK2	ENST00000245222.8	2963	7	139	1	-20	-1	intron_retention	FALSE	canonical	1	48370	junction_1	71878.00893903503	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	228	1103	10.0	-76	True	AATAAA	-22
PB.7408.6	chr20	+	3799	12	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	-29	-9	intron_retention	FALSE	canonical	1	176	junction_9	95967.8301650873	NA	2	NA	TRUE	NA	NA	NA	C	coding	216	651	154	804	45.0	-31	True	ATTAAA	-6
PB.10495.19	chr7	-	3331	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	0	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	111483.43910705636	NA	18	4	TRUE	NA	NA	NA	C	coding	804	2415	227	2641	25.0	-1	True	NA	NA
PB.10495.18	chr7	-	3235	28	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	95501.64750641193	NA	6	3	TRUE	NA	NA	NA	C	coding	570	1713	17	1729	25.0	0	True	NA	NA
PB.8305.1	chr3	-	6142	5	full-splice_match	NAA50	ENST00000240922.7	6135	5	-6	-1	-6	1	multi-exon	FALSE	canonical	1	885142	junction_4	202105.9816321625	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	332	841	25.0	8375	False	AATAAA	-16
PB.8305.3	chr3	-	3540	5	full-splice_match	NAA50	ENST00000240922.7	6135	5	36	2559	-8	-25	multi-exon	FALSE	canonical	1	885142	junction_4	202105.9816321625	NA	3	NA	TRUE	NA	NA	NA	C	coding	169	510	290	799	40.0	2	True	ATTAAA	-32
PB.7408.7	chr20	+	4220	10	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-27	-8	intron_retention	FALSE	canonical	1	142234	junction_2	55869.00721319159	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	152	802	45.0	-29	True	ATTAAA	-7
PB.10495.13	chr7	-	3046	29	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	-18	2	any annotated donor/acceptor	FALSE	canonical	1	3316	junction_1	87802.21260507584	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	36	2663	25.0	-19	False	NA	NA
PB.10495.12	chr7	-	3371	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	1302	junction_23	110989.4242093624	NA	1	NA	TRUE	NA	NA	NA	C	coding	886	2661	18	2678	25.0	-1	True	NA	NA
PB.10495.11	chr7	-	3285	29	full-splice_match	VPS41	ENST00000310301.8	5903	29	27	2591	-11	1	multi-exon	FALSE	canonical	1	194369	junction_28	68542.99035061194	NA	1	NA	TRUE	NA	NA	NA	C	coding	854	2565	29	2593	25.0	-12	True	NA	NA
PB.10495.10	chr7	-	3412	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	4323	junction_15	110204.20202627179	NA	1	NA	TRUE	NA	NA	NA	C	coding	469	1410	1310	2719	25.0	-1	True	NA	NA
PB.10495.17	chr7	-	3199	28	full-splice_match	VPS41	ENST00000395969.6	3181	28	-17	-1	0	1	multi-exon	FALSE	canonical	1	4104	junction_24	95596.2006926801	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	18	2507	25.0	-1	True	NA	NA
PB.10495.16	chr7	-	3396	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	0	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	124684.88046766787	NA	0	NA	TRUE	NA	NA	NA	C	coding	544	1635	778	2412	25.0	-1	True	NA	NA
PB.833.5	chr1	-	2170	6	full-splice_match	HDGF	ENST00000368209.9	2171	6	0	1	0	-1	multi-exon	FALSE	canonical	1	19096	junction_5	1772901.236437315	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	131	832	25.0	-1	True	AATAAA	-14
PB.2729.26	chr12	-	3747	14	novel_not_in_catalog	GNS	novel	4877	13	NA	NA	0	-1277	any annotated donor/acceptor	FALSE	canonical	1	394	junction_8	235115.05464963193	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	131	1732	15.0	-1	True	AATAAA	-21
PB.7408.5	chr20	+	2977	12	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-1	-74	intron_retention	FALSE	canonical	1	142234	junction_2	53794.902029193974	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	126	776	60.0	-3	True	NA	NA
PB.2729.20	chr12	-	3930	15	full-splice_match	GNS	ENST00000543646.5	2164	15	-29	-1737	-4	-1276	multi-exon	FALSE	canonical	1	1896	junction_13	280392.3198486127	NA	1	NA	TRUE	NA	NA	NA	C	coding	584	1755	160	1914	20.0	-30	True	AATAAA	-22
PB.2729.21	chr12	-	3780	13	full-splice_match	GNS	ENST00000542058.5	2020	13	-10	-1750	6	-1276	multi-exon	FALSE	canonical	1	5191	junction_12	231407.03188015555	NA	1	NA	TRUE	NA	NA	NA	C	coding	532	1599	166	1764	20.0	-36	True	AATAAA	-22
PB.2729.22	chr12	-	3588	15	novel_not_in_catalog	GNS	novel	4877	13	NA	NA	4	-1276	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	227777.04583874453	NA	0	NA	TRUE	NA	NA	NA	C	coding	552	1659	127	1785	20.0	3	True	AATAAA	-22
PB.8380.2	chr3	-	2585	6	incomplete-splice_match	GATA2	ENST00000487848.5	1878	7	561	-838	-53	-35	5prime_fragment	FALSE	canonical	1	138993	junction_5	111348.02191220102	NA	0	NA	TRUE	NA	NA	NA	B	coding	480	1443	305	1747	80.0	8671	False	NA	NA
PB.2729.28	chr12	-	3596	14	novel_in_catalog	GNS	novel	4877	13	NA	NA	12	-1278	combination_of_known_junctions	FALSE	canonical	1	1922	junction_13	224090.60487652977	NA	0	NA	TRUE	NA	NA	NA	C	coding	476	1431	152	1582	15.0	-1	True	AATAAA	-20
PB.64.1	chr1	+	890	7	full-splice_match	PARK7	ENST00000493678.5	1088	7	-26	224	3	0	multi-exon	FALSE	canonical	1	1049077	junction_1	1419645.090840978	NA	0	NA	TRUE	NA	NA	NA	A	coding	189	570	94	663	10.0	-45	True	AATAAA	-19
PB.6477.34	chr2	-	2150	22	incomplete-splice_match	PNPT1	ENST00000415374.5	3308	29	-21	10473	-2	2359	3prime_fragment	FALSE	canonical	1	59518	junction_14	65780.45840772976	NA	2	NA	TRUE	NA	NA	NA	C	coding	613	1842	22	1863	95.0	-10	True	NA	NA
PB.11595.15	chr9	-	5917	5	incomplete-splice_match	PTAR1	ENST00000340434.4	1417	8	-69	8799	-52	4995	3prime_fragment	FALSE	canonical	1	100496	junction_4	28490.151196290622	NA	11	NA	TRUE	NA	NA	NA	C	coding	241	726	74	799	80.0	-1	True	AAAAAG	-25
PB.11595.14	chr9	-	3985	8	full-splice_match	PTAR1	ENST00000340434.4	1417	8	-11	-2557	2	2440	multi-exon	FALSE	canonical	1	41017	junction_1	44301.9863524821	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	16	1224	35.0	-1	True	ATTAAA	-11
PB.11595.17	chr9	-	1686	2	full-splice_match	PTAR1	ENST00000472967.2	1689	2	7	-4	3	4	multi-exon	FALSE	canonical	1	34434	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	ATTAAA	-21
PB.11595.16	chr9	-	5461	1	genic	PTAR1	novel	NA	NA	NA	NA	-57	2567	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-6	True	NA	NA
PB.2535.12	chr12	+	3361	9	full-splice_match	BICD1	ENST00000548411.5	8811	9	-306	5756	10	0	multi-exon	FALSE	canonical	1	20136	junction_7	32932.18759032529	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	488	2995	85.0	-2	True	GATAAA	-37
PB.2535.13	chr12	+	2751	1	full-splice_match	BICD1	ENST00000551848.1	1962	1	10	-799	10	789	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-2	True	AATAAA	-20
PB.2535.10	chr12	+	4029	7	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-416	39121	-22	-174	3prime_fragment	FALSE	canonical	1	67858	junction_5	14716.910100855637	NA	1	NA	TRUE	NA	NA	NA	C	coding	873	2622	520	3141	20.0	-34	True	ATTAAA	-21
PB.2535.11	chr12	+	3899	7	incomplete-splice_match	BICD1	ENST00000281474.9	3281	10	-404	39239	-10	-292	3prime_fragment	FALSE	canonical	1	67858	junction_5	14716.910100855637	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2622	508	3129	90.0	-22	True	NA	NA
PB.5563.4	chr19	+	3026	6	incomplete-splice_match	MIDN	ENST00000591446.6	3243	7	1693	-444	19	3	5prime_fragment	FALSE	canonical	1	547920	junction_5	101180.82699681794	NA	3	NA	TRUE	NA	NA	NA	B	coding	362	1089	67	1155	10.0	-9573	False	AATAAA	-17
PB.5563.5	chr19	+	2607	5	incomplete-splice_match	MIDN	ENST00000591446.6	3243	7	1950	-93	276	93	5prime_fragment	FALSE	canonical	1	547920	junction_4	95152.25277515767	NA	4	NA	TRUE	NA	NA	NA	B	coding	351	1056	32	1087	95.0	-9316	False	NA	NA
PB.5563.7	chr19	+	2234	3	incomplete-splice_match	MIDN	ENST00000591446.6	3243	7	5012	-94	1216	94	5prime_fragment	FALSE	canonical	1	547920	junction_2	105723.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	235	708	6	713	90.0	-3	True	NA	NA
PB.5563.1	chr19	+	2471	5	novel_not_in_catalog	MIDN	novel	1163	5	NA	NA	8	93	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	303744.74226560694	NA	1	NA	TRUE	NA	NA	NA	B	coding	235	708	244	951	95.0	-8843	False	NA	NA
PB.5563.2	chr19	+	2893	8	novel_in_catalog	MIDN	novel	1163	5	NA	NA	572	93	combination_of_known_junctions	FALSE	canonical	1	111903	junction_3	261372.21225013692	NA	2	NA	TRUE	NA	NA	NA	B	coding	405	1218	156	1373	95.0	-8279	False	NA	NA
PB.5563.3	chr19	+	2753	6	incomplete-splice_match	MIDN	ENST00000591446.6	3243	7	1616	-94	-58	94	5prime_fragment	FALSE	canonical	1	547920	junction_5	101180.82699681794	NA	1	NA	TRUE	NA	NA	NA	B	coding	398	1197	36	1232	90.0	-9650	False	NA	NA
PB.8523.7	chr3	-	2237	5	full-splice_match	NCEH1	ENST00000475381.5	4687	5	120	2330	14	1196	multi-exon	FALSE	canonical	1	158311	junction_4	30089.86244048816	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	115	1341	70.0	-34	True	CATAAA	-36
PB.12298.2	chrX	+	4079	5	novel_not_in_catalog	MAGEC1	novel	4270	4	NA	NA	-26	-112	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	6650.618895072849	NA	1	NA	TRUE	NA	NA	NA	B	coding	1107	3324	313	3636	10.0	-30	True	AATAAA	-31
PB.9963.1	chr6	+	2069	1	incomplete-splice_match	C6orf89	ENST00000480824.6	6861	9	41037	5	41027	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	ATTAAA	-14
PB.12298.1	chrX	+	4197	5	novel_not_in_catalog	MAGEC1	novel	4270	4	NA	NA	-30	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	6650.618895072849	NA	0	NA	TRUE	NA	NA	NA	B	coding	1107	3324	317	3640	30.0	-34	True	AATAAA	-22
PB.3609.7	chr14	-	2009	5	novel_not_in_catalog	FOXN3	novel	513	3	NA	NA	15625	0	any annotated donor/acceptor	FALSE	canonical	1	437	junction_4	82996.9589092727	NA	1	NA	TRUE	NA	NA	NA	B	coding	186	561	435	995	85.0	-543	False	NA	NA
PB.1368.1	chr10	+	2599	3	incomplete-splice_match	CCNY	ENST00000374704.7	3960	10	216140	607	22818	-607	5prime_fragment	FALSE	canonical	1	706068	junction_1	57484.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	93	282	171	452	50.0	NA	False	ATTAAA	-7
PB.2483.19	chr12	+	2916	9	incomplete-splice_match	ATF7IP	ENST00000544627.5	4847	15	217	37638	-35	104	3prime_fragment	FALSE	canonical	1	38213	junction_1	118009.29750811745	NA	0	NA	TRUE	NA	NA	NA	C	coding	937	2811	104	2914	40.0	0	True	NA	NA
PB.915.6	chr1	+	1765	7	novel_not_in_catalog	TIPRL	novel	3032	7	NA	NA	37	-1908	any annotated donor/acceptor	FALSE	canonical	1	9363	junction_6	296583.06086360064	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	112	792	15.0	8	True	AATAAA	-25
PB.5477.4	chr18	-	1641	10	full-splice_match	ACAA2	ENST00000587994.5	1657	10	16	0	0	0	multi-exon	FALSE	canonical	1	28546	junction_9	361370.5828223405	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	118	1299	25.0	-1	True	AATAAA	-16
PB.2483.10	chr12	+	7949	16	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	815	junction_15	107960.57217315753	NA	2	NA	TRUE	NA	NA	NA	C	coding	1270	3813	159	3971	30.0	-5	True	AATAAA	-15
PB.2483.11	chr12	+	3537	11	full-splice_match	ATF7IP	ENST00000537653.5	3563	11	5	21	-2	-21	multi-exon	FALSE	canonical	1	149245	junction_1	78678.75672689549	NA	0	NA	TRUE	NA	NA	NA	C	coding	998	2997	154	3150	100.0	0	True	NA	NA
PB.2483.12	chr12	+	5798	16	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	-2	2019	any annotated donor/acceptor	FALSE	canonical	1	815	junction_15	107960.57217315753	NA	3	NA	TRUE	NA	NA	NA	C	coding	1270	3813	154	3966	70.0	0	True	AAAAAG	-42
PB.2483.13	chr12	+	3102	8	incomplete-splice_match	ATF7IP	ENST00000543189.5	4887	13	-5	24558	0	-2472	3prime_fragment	FALSE	canonical	1	94183	junction_2	125649.03399825197	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	148	2340	85.0	6	True	NA	NA
PB.2483.14	chr12	+	4874	13	full-splice_match	ATF7IP	ENST00000543189.5	4887	13	13	0	13	0	multi-exon	FALSE	canonical	1	94183	junction_2	101593.47592197897	NA	5	NA	TRUE	NA	NA	NA	C	coding	1105	3318	130	3447	30.0	-360	False	NA	NA
PB.2483.15	chr12	+	3636	14	novel_not_in_catalog	ATF7IP	novel	8878	15	NA	NA	17	-76	any annotated donor/acceptor	FALSE	canonical	1	1685	junction_13	115243.56529064609	NA	0	NA	TRUE	NA	NA	NA	C	coding	1108	3327	126	3452	10.0	-356	False	NA	NA
PB.2483.16	chr12	+	4451	15	full-splice_match	ATF7IP	ENST00000544627.5	4847	15	150	246	-102	-246	multi-exon	FALSE	canonical	1	38213	junction_1	94885.52170142198	NA	0	NA	TRUE	NA	NA	NA	C	coding	1278	3837	171	4007	70.0	-67	False	NA	NA
PB.2483.17	chr12	+	4131	15	full-splice_match	ATF7IP	ENST00000544627.5	4847	15	243	473	-9	43	multi-exon	FALSE	canonical	1	38213	junction_1	94885.52170142198	NA	2	NA	TRUE	NA	NA	NA	C	coding	1278	3837	78	3914	25.0	26	True	NA	NA
PB.9996.4	chr6	-	5377	26	novel_in_catalog	CUL7	novel	5254	26	NA	NA	33	-1	combination_of_known_junctions	FALSE	canonical	1	18420	junction_25	66630.43001396884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1698	5097	211	5307	15.0	5548	False	AATAAA	-19
PB.5573.1	chr19	+	1371	5	full-splice_match	REEP6	ENST00000233596.7	1794	5	420	3	1	-3	multi-exon	FALSE	canonical	1	366343	junction_1	33386.36977401856	NA	0	NA	TRUE	NA	NA	NA	A	coding	92	279	1066	1344	15.0	-24	True	AATAAA	-14
PB.6604.8	chr2	+	2054	23	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	2095	junction_22	170329.6626384825	NA	0	NA	TRUE	NA	NA	NA	C	coding	628	1887	23	1909	30.0	-9	True	AATAAA	-26
PB.8523.1	chr3	-	3987	5	full-splice_match	NCEH1	ENST00000475381.5	4687	5	292	408	126	-12	multi-exon	FALSE	canonical	1	158311	junction_4	30089.86244048816	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	42	1169	15.0	253	False	AATAAA	-16
PB.7408.9	chr20	+	3251	13	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	-27	-8	intron_retention	FALSE	canonical	1	176	junction_10	91973.34036869809	NA	1	NA	TRUE	NA	NA	NA	C	coding	216	651	152	802	45.0	-29	True	ATTAAA	-7
PB.11881.8	chr9	-	3043	6	full-splice_match	SURF4	ENST00000613129.4	3148	6	89	16	22	-16	multi-exon	FALSE	canonical	1	12658	junction_5	780390.6796311704	NA	1	NA	TRUE	NA	NA	NA	C	coding	226	681	336	1016	25.0	-18	True	AATAAA	-16
PB.9413.10	chr5	+	2300	1	novel_in_catalog	SNX2	novel	2128	15	NA	NA	4606	1688	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.490.28	chr1	+	4684	3	novel_in_catalog	IFI44L	novel	554	3	NA	NA	20	1179	intron_retention	FALSE	canonical	1	13228	junction_1	233752.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	161	486	494	979	40.0	41	True	NA	NA
PB.9996.1	chr6	-	5407	26	full-splice_match	CUL7	ENST00000265348.7	5254	26	-152	-1	94	1	multi-exon	TRUE	canonical	1	111127	junction_25	56690.49294442235	NA	0	NA	TRUE	NA	NA	NA	C	coding	1698	5097	239	5335	10.0	-1	True	AATAAA	-21
PB.9996.2	chr6	-	5693	25	novel_in_catalog	CUL7	novel	5254	26	NA	NA	84	-1	intron_retention	FALSE	canonical	1	111127	junction_24	57859.15266037336	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	2690	5623	15.0	-11	True	AATAAA	-19
PB.8344.29	chr3	-	2544	2	incomplete-splice_match	KPNA1	ENST00000494339.5	1923	15	18	67202	-10	-40277	3prime_fragment	FALSE	canonical	1	337942	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	60	183	166	348	75.0	20	True	NA	NA
PB.6303.2	chr2	+	3460	17	novel_in_catalog	CPSF3	novel	2345	18	NA	NA	34	1	intron_retention	TRUE	canonical	1	319804	junction_1	136771.2826509867	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	2263	3378	20.0	-386	False	AATAAA	-21
PB.1945.41	chr11	-	1900	14	full-splice_match	SLC43A3	ENST00000395124.5	2617	14	6	711	0	103	multi-exon	FALSE	canonical	1	276605	junction_13	179922.87628041563	NA	1	1	TRUE	NA	NA	NA	C	coding	491	1476	300	1775	65.0	5	True	NA	NA
PB.1945.40	chr11	-	2735	15	novel_not_in_catalog	AP000781.2	novel	1639	13	NA	NA	-3064	-17803	any annotated donor/acceptor	FALSE	canonical	1	1275	junction_8	295859.3774526651	NA	1	NA	TRUE	NA	NA	NA	B	coding	284	855	1047	1901	20.0	-3	True	AATAAA	-16
PB.9350.20	chr5	-	3504	2	novel_in_catalog	TTC37	novel	8038	44	NA	NA	0	-2793	intron_retention	FALSE	canonical	1	2915	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-1	True	NA	NA
PB.6342.17	chr2	-	2694	7	full-splice_match	LDAH	ENST00000237822.7	2907	7	40	173	15	-173	multi-exon	FALSE	canonical	1	99451	junction_6	22146.691405765836	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	41	1018	15.0	26	True	AATAAA	-14
PB.7254.5	chr20	+	2801	17	novel_in_catalog	ACSS2	novel	455	2	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	3851	junction_12	124083.76095868606	NA	1	1	TRUE	NA	NA	NA	C	coding	674	2025	33	2057	20.0	2	True	AATAAA	-14
PB.660.1	chr1	-	2188	4	full-splice_match	FAM72B	ENST00000355228.8	1773	4	-423	8	6	-8	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	3	1	TRUE	NA	NA	NA	A	coding	109	330	846	1175	35.0	NA	False	AATAAA	-10
PB.1352.8	chr10	-	3027	4	novel_not_in_catalog	ZNF438	novel	3243	8	NA	NA	-17	-83229	any annotated donor/acceptor	FALSE	canonical	1	5536	junction_1	7934.3538419261895	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	496	975	45.0	-17	False	AATAAA	-9
PB.7254.4	chr20	+	2921	18	full-splice_match	ACSS2	ENST00000360596.6	3065	18	139	5	2	-5	multi-exon	FALSE	canonical	1	245876	junction_1	88788.51732049769	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2106	73	2178	25.0	-6	True	AATAAA	-13
PB.1352.2	chr10	-	3033	8	novel_not_in_catalog	ZNF438	novel	857	8	NA	NA	47	3	intron_retention	FALSE	canonical	1	6007	junction_5	21381.48190679524	NA	2	NA	TRUE	NA	NA	NA	C	coding	828	2487	355	2841	30.0	-14	True	AATAAA	-31
PB.1352.3	chr10	-	2807	4	novel_in_catalog	ZNF438	novel	857	8	NA	NA	6	1	intron_retention	FALSE	canonical	1	118	junction_3	23882.235103849795	NA	3	NA	TRUE	NA	NA	NA	C	coding	828	2487	131	2617	25.0	6	True	AATAAA	-29
PB.7171.1	chr20	+	2372	4	novel_in_catalog	LAMP5	novel	1309	5	NA	NA	165	0	intron_retention	TRUE	canonical	1	75803	junction_1	18124.123500645946	NA	2	NA	TRUE	NA	NA	NA	C	coding	153	462	1207	1668	15.0	-3523	False	AATAAA	-18
PB.1352.1	chr10	-	3022	7	full-splice_match	ZNF438	ENST00000436087.6	3164	7	12	130	0	4	multi-exon	FALSE	canonical	1	11436	junction_6	16613.963849893124	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	343	2829	35.0	-1	True	AATAAA	-32
PB.1352.6	chr10	-	2970	3	novel_not_in_catalog	ZNF438	novel	3243	8	NA	NA	-13	-83224	any annotated donor/acceptor	FALSE	canonical	1	5536	junction_1	638.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	434	913	45.0	-13	False	AATAAA	-14
PB.8344.28	chr3	-	2017	14	full-splice_match	KPNA1	ENST00000344337.10	6830	14	-9	4822	0	183	multi-exon	FALSE	canonical	1	274573	junction_11	96554.2598109122	NA	0	NA	TRUE	NA	NA	NA	C	coding	538	1617	187	1803	20.0	-1	True	AATAAA	-12
PB.1352.4	chr10	-	2900	6	full-splice_match	ZNF438	ENST00000413025.5	3106	6	72	134	60	0	multi-exon	FALSE	canonical	1	6812	junction_5	18424.21969039666	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	225	2711	30.0	-1	True	AATAAA	-28
PB.1352.5	chr10	-	3088	8	novel_not_in_catalog	ZNF438	novel	857	8	NA	NA	65	-1	intron_retention	FALSE	canonical	1	220	junction_5	21459.281173650623	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	423	2909	30.0	4	True	AATAAA	-18
PB.2414.6	chr12	+	4685	32	full-splice_match	NCAPD2	ENST00000315579.9	5548	32	717	146	3	-146	multi-exon	FALSE	canonical	1	373774	junction_21	158816.24563034673	NA	0	NA	TRUE	NA	NA	NA	C	coding	1397	4194	95	4288	60.0	-6	True	NA	NA
PB.2414.7	chr12	+	4575	32	novel_not_in_catalog	NCAPD2	novel	584	5	NA	NA	30	167	any annotated donor/acceptor	FALSE	canonical	1	2812	junction_1	196765.79709336083	NA	0	NA	TRUE	NA	NA	NA	C	coding	1397	4194	151	4344	60.0	27	True	NA	NA
PB.2414.4	chr12	+	4150	31	incomplete-splice_match	NCAPD2	ENST00000315579.9	5548	32	717	931	3	294	3prime_fragment	FALSE	canonical	1	373774	junction_21	143214.44137454234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1352	4056	95	4150	55.0	-6	True	NA	NA
PB.2414.5	chr12	+	4485	32	full-splice_match	NCAPD2	ENST00000315579.9	5548	32	619	444	-95	35	multi-exon	FALSE	canonical	1	373774	junction_21	158816.24563034673	NA	0	NA	TRUE	NA	NA	NA	C	coding	1397	4194	193	4386	60.0	-3	True	NA	NA
PB.2414.2	chr12	+	4822	32	full-splice_match	NCAPD2	ENST00000315579.9	5548	32	740	-14	20	14	multi-exon	FALSE	canonical	1	373774	junction_21	158816.24563034673	NA	1	NA	TRUE	NA	NA	NA	C	coding	1397	4194	72	4265	10.0	17	True	AATAAA	-33
PB.2414.3	chr12	+	4952	33	novel_in_catalog	NCAPD2	novel	584	5	NA	NA	6	-1	combination_of_known_junctions	TRUE	canonical	1	6592	junction_1	194609.93885072623	NA	1	NA	TRUE	NA	NA	NA	C	coding	1397	4194	217	4410	25.0	-15	True	AATAAA	-18
PB.9900.3	chr6	+	3642	4	novel_in_catalog	HLA-DRA	novel	1280	5	NA	NA	13	-4	intron_retention	FALSE	canonical	1	9709132	junction_2	243246.30929893992	NA	1	NA	TRUE	NA	NA	NA	C	coding	207	624	2617	3240	20.0	4	True	AATAAA	-21
PB.2414.1	chr12	+	4519	32	full-splice_match	NCAPD2	ENST00000315579.9	5548	32	717	312	3	167	multi-exon	FALSE	canonical	1	373774	junction_21	158816.24563034673	NA	0	NA	TRUE	NA	NA	NA	C	coding	1397	4194	95	4288	60.0	-6	True	NA	NA
PB.2820.20	chr12	-	3192	16	full-splice_match	CDK17	ENST00000543119.6	2442	16	-91	-659	-11	659	multi-exon	FALSE	canonical	1	133606	junction_15	58623.29261786649	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	616	2187	30.0	-10	True	ATTAAA	-23
PB.2414.8	chr12	+	4883	32	novel_not_in_catalog	NCAPD2	novel	584	5	NA	NA	33	-1	any annotated donor/acceptor	FALSE	canonical	1	2812	junction_1	196765.79709336083	NA	0	NA	TRUE	NA	NA	NA	C	coding	1397	4194	148	4341	25.0	30	True	AATAAA	-18
PB.3712.42	chr14	-	1873	4	novel_not_in_catalog	IGHV3-30	novel	431	2	NA	NA	1	2609	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	26133.252419092423	NA	0	NA	TRUE	NA	NA	NA	C	coding	173	522	80	601	25.0	NA	False	AATAAA	-26
PB.1777.1	chr11	+	2529	8	full-splice_match	TRIM6	ENST00000278302.9	3217	8	2	686	1	-157	multi-exon	FALSE	canonical	1	17125	junction_4	13345.926020585413	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	139	1605	35.0	0	True	AATAAA	-17
PB.2537.18	chr12	+	2231	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	120	2088	0	-117	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	45	2177	30.0	0	True	NA	NA
PB.11499.4	chr9	-	2313	12	full-splice_match	SMU1	ENST00000397149.3	7122	12	-15	4824	-15	-4824	multi-exon	FALSE	canonical	1	110256	junction_7	184835.58098487565	NA	3	NA	TRUE	NA	NA	NA	C	coding	513	1542	67	1608	45.0	-4	True	NA	NA
PB.1777.3	chr11	+	3414	8	full-splice_match	TRIM6	ENST00000380097.7	3403	8	-12	1	-10	-1	multi-exon	FALSE	canonical	1	17125	junction_4	12995.414305807717	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	255	1805	15.0	7	True	NA	NA
PB.10755.1	chr7	-	2950	21	full-splice_match	RASA4	ENST00000262940.11	5605	21	-17	2672	-17	5	multi-exon	TRUE	canonical	0	0	junction_6	27839.906907351542	NA	2	NA	TRUE	NA	NA	NA	A	coding	803	2412	86	2497	10.0	NA	False	AGTAAA	-21
PB.2537.10	chr12	+	3608	20	full-splice_match	DNM1L	ENST00000549701.5	2487	20	-20	-1101	-17	285	multi-exon	FALSE	canonical	1	115225	junction_15	179834.86808074158	NA	3	NA	TRUE	NA	NA	NA	C	coding	736	2211	95	2305	90.0	-50	True	NA	NA
PB.2537.11	chr12	+	3495	18	full-splice_match	DNM1L	ENST00000266481.10	3101	18	-31	-363	-15	285	multi-exon	FALSE	canonical	1	135081	junction_14	169899.50759445233	NA	1	NA	TRUE	NA	NA	NA	C	coding	699	2100	93	2192	90.0	-48	True	NA	NA
PB.2537.12	chr12	+	3537	18	novel_in_catalog	DNM1L	novel	4439	19	NA	NA	-8	15	intron_retention	FALSE	canonical	1	297793	junction_14	151433.4122819545	NA	3	NA	TRUE	NA	NA	NA	C	coding	537	1614	86	1699	40.0	-41	True	AATAAA	-30
PB.1777.2	chr11	+	3214	8	full-splice_match	TRIM6	ENST00000278302.9	3217	8	3	0	-1	0	multi-exon	FALSE	canonical	1	17125	junction_4	13345.926020585413	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	138	1604	10.0	1	True	NA	NA
PB.2537.14	chr12	+	4316	18	full-splice_match	DNM1L	ENST00000266481.10	3101	18	-16	-1199	0	0	multi-exon	FALSE	canonical	1	135081	junction_14	169899.50759445233	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	78	2177	55.0	-33	True	AATAAA	-23
PB.2537.15	chr12	+	2876	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	101	1462	0	3	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	64	2196	40.0	-19	True	ATTAAA	-27
PB.2537.16	chr12	+	2399	19	full-splice_match	DNM1L	ENST00000452533.6	4439	19	116	1924	0	16	multi-exon	FALSE	canonical	1	187241	junction_14	166929.84515241132	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	49	2181	40.0	-4	True	AATAAA	-31
PB.2537.17	chr12	+	4548	18	novel_in_catalog	DNM1L	novel	4439	19	NA	NA	0	3	intron_retention	FALSE	canonical	1	253917	junction_14	155703.16866670124	NA	25	2	TRUE	NA	NA	NA	C	coding	563	1692	45	1736	45.0	0	True	AATAAA	-18
PB.6696.2	chr2	-	6274	23	full-splice_match	RGPD8	ENST00000302558.7	5576	23	2	-700	2	700	multi-exon	FALSE	canonical	1	147	junction_22	11690.929212569281	NA	8	NA	TRUE	NA	NA	NA	C	coding	1765	5298	191	5488	50.0	NA	False	AATAAA	-18
PB.6696.1	chr2	-	7285	23	full-splice_match	RGPD8	ENST00000302558.7	5576	23	-6	-1703	-6	1703	multi-exon	FALSE	canonical	1	147	junction_22	11690.929212569281	NA	0	NA	TRUE	NA	NA	NA	C	coding	1765	5298	199	5496	15.0	NA	False	ATTAAA	-14
PB.1182.3	chr1	-	4415	5	full-splice_match	TRIM11	ENST00000366699.3	2511	5	-48	-1856	-8	-2	multi-exon	FALSE	canonical	1	117003	junction_2	28101.578989222297	NA	2	NA	TRUE	NA	NA	NA	C	coding	385	1158	288	1445	15.0	-14	True	AATAAA	-18
PB.1182.2	chr1	-	2479	5	full-splice_match	TRIM11	ENST00000602582.5	682	5	-649	-1148	4	-1	multi-exon	FALSE	canonical	1	12869	junction_3	79147.13152730174	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	276	1451	10.0	-2	True	AATAAA	-19
PB.1182.1	chr1	-	2357	6	full-splice_match	TRIM11	ENST00000284551.10	2715	6	357	1	-296	-1	multi-exon	FALSE	canonical	1	117003	junction_3	36234.69792119151	NA	0	NA	TRUE	NA	NA	NA	C	coding	441	1326	4	1329	10.0	9515	False	AATAAA	-19
PB.7624.1	chr22	-	2509	8	full-splice_match	USP41	ENST00000486536.6	1188	8	-2	-1319	-2	1319	multi-exon	FALSE	canonical	0	0	junction_1	5483.864922643146	NA	0	NA	TRUE	NA	NA	NA	A	coding	240	723	277	999	25.0	-11	True	NA	NA
PB.1240.28	chr1	-	2936	15	novel_not_in_catalog	HNRNPU	novel	12852	2	NA	NA	-4	28	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	1904400.8788093852	NA	5	1	TRUE	NA	NA	NA	C	coding	513	1542	607	2148	30.0	-1	True	ATTAAA	-12
PB.77.28	chr1	+	2285	3	incomplete-splice_match	PIK3CD	ENST00000361110.6	3508	23	14075	-1679	7997	-8	5prime_fragment	FALSE	canonical	1	140217	junction_1	16416.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	64	195	226	420	60.0	6731	False	AGTAAA	-9
PB.1182.5	chr1	-	2389	5	full-splice_match	TRIM11	ENST00000366699.3	2511	5	-51	173	-11	-173	multi-exon	FALSE	canonical	1	117003	junction_2	28101.578989222297	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	291	1448	80.0	-17	True	NA	NA
PB.3964.4	chr15	+	2084	16	full-splice_match	BBS4	ENST00000268057.8	2490	16	21	385	1	4	multi-exon	FALSE	canonical	1	86698	junction_1	54755.95109193358	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	21	1580	80.0	1	True	NA	NA
PB.10465.4	chr7	-	5298	8	novel_not_in_catalog	SCRN1	novel	5257	8	NA	NA	-51	-25	any annotated donor/acceptor	FALSE	canonical	1	7634	junction_1	248492.9376086728	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	210	1436	70.0	-89	True	NA	NA
PB.6422.1	chr2	+	1684	11	full-splice_match	RMDN2	ENST00000354545.6	1381	11	-32	-271	-32	-23	multi-exon	FALSE	canonical	1	33233	junction_1	12260.222584031662	NA	0	NA	TRUE	NA	NA	NA	A	coding	410	1233	156	1388	50.0	0	True	AATAAA	-44
PB.10465.1	chr7	-	5142	7	full-splice_match	SCRN1	ENST00000425819.6	1552	7	-132	-3458	-46	0	multi-exon	FALSE	canonical	1	8656	junction_6	233804.38836414798	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	249	1289	10.0	-84	True	AATAAA	-21
PB.7753.1	chr22	-	1459	7	novel_in_catalog	RAC2	novel	1482	7	NA	NA	-1	-3	combination_of_known_junctions	TRUE	canonical	1	19117	junction_6	869386.1652379927	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	124	681	25.0	-3	True	NA	NA
PB.7753.3	chr22	-	1480	7	full-splice_match	RAC2	ENST00000249071.10	1482	7	-9	11	-1	-11	multi-exon	FALSE	canonical	1	1569323	junction_2	364929.55196950916	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	132	710	30.0	-11	True	NA	NA
PB.1622.1	chr10	+	1285	3	full-splice_match	RPARP-AS1	ENST00000473970.2	1297	3	7	5	7	0	multi-exon	FALSE	canonical	1	95315	junction_1	10509.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	19	60	308	367	20.0	-6276	False	NA	NA
PB.7753.4	chr22	-	1412	6	novel_in_catalog	RAC2	novel	1482	7	NA	NA	-4	-11	no_combination_of_known_junctions	FALSE	canonical	1	6240	junction_3	818427.2301510012	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	127	642	30.0	-6	True	NA	NA
PB.8450.1	chr3	-	3579	16	full-splice_match	SLC9A9	ENST00000316549.10	3627	16	47	1	1	-1	multi-exon	FALSE	canonical	1	46016	junction_10	7920.644761633993	NA	1	NA	TRUE	NA	NA	NA	A	coding	645	1938	163	2100	20.0	-27	True	AATAAA	-16
PB.330.3	chr1	+	2017	11	full-splice_match	NFYC	ENST00000425457.6	1536	11	-19	-462	8	0	multi-exon	TRUE	canonical	1	53950	junction_8	144204.91308259926	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	180	1244	20.0	-7	True	AATAAA	-14
PB.11200.2	chr8	-	1735	6	full-splice_match	IL7	ENST00000263851.8	2076	6	58	283	-1	-7	multi-exon	FALSE	canonical	1	17244	junction_4	5096.637189363198	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	544	1077	85.0	-3	True	AATAAA	-41
PB.5195.2	chr17	-	3226	1	incomplete-splice_match	HELZ	ENST00000358691.9	13810	33	171509	11	114687	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	4043	False	AATAAA	-11
PB.5195.1	chr17	-	3845	1	incomplete-splice_match	HELZ	ENST00000358691.9	13810	33	170890	11	114068	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	3424	False	AATAAA	-11
PB.6102.8	chr19	+	2478	9	full-splice_match	SAE1	ENST00000270225.11	2049	9	15	-444	-11	-1	multi-exon	FALSE	canonical	1	597413	junction_2	358291.3922535678	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	54	1094	20.0	-11	True	AATAAA	-21
PB.6102.9	chr19	+	2116	9	full-splice_match	SAE1	ENST00000596995.1	2106	9	-10	0	-10	0	multi-exon	FALSE	canonical	1	13009	junction_1	469784.81230051955	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	329	1177	10.0	-10	True	AATAAA	-16
PB.6102.6	chr19	+	1930	8	full-splice_match	SAE1	ENST00000392776.3	1851	8	-60	-19	-3	-1	multi-exon	FALSE	canonical	1	94506	junction_6	284302.7239183398	NA	0	NA	TRUE	NA	NA	NA	C	coding	266	801	97	897	5.0	-54	True	AATAAA	-15
PB.6102.7	chr19	+	1944	8	novel_in_catalog	SAE1	novel	723	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	7408	junction_1	495333.68353794125	NA	1	NA	TRUE	NA	NA	NA	C	coding	242	729	277	1005	10.0	-34	True	AATAAA	-16
PB.6102.4	chr19	+	2199	8	novel_in_catalog	SAE1	novel	723	7	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	1	20413	junction_1	361360.9421443172	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	119	727	20.0	-54	True	AATAAA	-14
PB.6102.5	chr19	+	2225	11	novel_not_in_catalog	SAE1	novel	723	7	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	622	junction_6	534905.6740488365	NA	3	1	TRUE	NA	NA	NA	C	coding	383	1152	97	1248	10.0	-54	True	AATAAA	-16
PB.6102.2	chr19	+	1996	9	full-splice_match	SAE1	ENST00000270225.11	2049	9	52	1	20	0	multi-exon	FALSE	canonical	1	597413	junction_2	358291.3922535678	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	17	1057	10.0	-4	True	AATAAA	-16
PB.6102.3	chr19	+	1913	9	novel_in_catalog	SAE1	novel	723	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	20413	junction_1	468195.15390471456	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	126	974	10.0	-61	True	AATAAA	-16
PB.6102.1	chr19	+	2359	9	novel_in_catalog	SAE1	novel	723	7	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	20413	junction_1	468195.15390471456	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	127	975	20.0	-62	True	AATAAA	-21
PB.5177.2	chr17	-	2961	21	full-splice_match	FTSJ3	ENST00000427159.6	3559	21	596	2	-5	-2	multi-exon	FALSE	canonical	1	231885	junction_20	175337.61607036865	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	51	2594	25.0	20	True	AATAAA	-14
PB.5177.1	chr17	-	3313	21	full-splice_match	FTSJ3	ENST00000427159.6	3559	21	573	-327	0	327	multi-exon	FALSE	canonical	1	231885	junction_20	175337.61607036865	NA	3	NA	TRUE	NA	NA	NA	C	coding	847	2544	74	2617	5.0	-3	True	AATACA	-27
PB.5177.6	chr17	-	2595	21	full-splice_match	FTSJ3	ENST00000427159.6	3559	21	566	398	1	-398	multi-exon	FALSE	canonical	1	231885	junction_20	175337.61607036865	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2514	81	2594	80.0	-10	True	NA	NA
PB.5177.4	chr17	-	2798	20	novel_in_catalog	FTSJ3	novel	3559	21	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	4908	junction_7	221951.82476524156	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	73	1377	25.0	-2	True	AATAAA	-14
PB.1100.1	chr1	+	2125	4	full-splice_match	SERTAD4	ENST00000367012.3	5219	4	-70	3164	-70	926	multi-exon	FALSE	canonical	1	15313	junction_1	14734.50472718902	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	301	1371	95.0	-4557	False	GATAAA	-32
PB.8184.8	chr3	-	2077	13	full-splice_match	ACTR8	ENST00000335754.7	3629	13	31	1521	31	66	multi-exon	FALSE	canonical	1	193899	junction_8	46765.93701408703	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	71	1945	30.0	9683	False	AGTAAA	-15
PB.11209.14	chr8	-	1889	9	full-splice_match	IMPA1	ENST00000256108.9	2690	9	365	436	0	-436	multi-exon	FALSE	canonical	1	195135	junction_8	55277.107326264595	NA	0	NA	TRUE	NA	NA	NA	C	coding	277	834	102	935	10.0	-4	True	AATATA	-22
PB.11499.1	chr9	-	4232	12	full-splice_match	SMU1	ENST00000397149.3	7122	12	-58	2948	-58	-2948	multi-exon	TRUE	canonical	1	110256	junction_7	184835.58098487565	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	110	1651	25.0	13	False	AATAAA	-36
PB.11209.11	chr8	-	2421	10	novel_in_catalog	IMPA1	novel	2690	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	105	junction_5	122620.43174863732	NA	1	NA	TRUE	NA	NA	NA	C	coding	308	927	102	1028	30.0	-4	True	AATAAA	-8
PB.11209.10	chr8	-	2279	8	novel_in_catalog	IMPA1	novel	2690	9	NA	NA	3	7	combination_of_known_junctions	FALSE	canonical	1	6051	junction_4	135589.1039621743	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	436	882	30.0	-1	True	AATAAA	-12
PB.6969.1	chr2	+	2758	1	novel_in_catalog	ZDBF2	novel	10296	5	NA	NA	-20	-27417	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	-55	False	NA	NA
PB.11209.12	chr8	-	2288	9	novel_in_catalog	IMPA1	novel	2690	9	NA	NA	-4	-17	combination_of_known_junctions	FALSE	canonical	1	3866	junction_5	103660.69075564518	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	469	915	50.0	2	True	ATTAAA	-17
PB.8946.4	chr4	+	2049	13	novel_in_catalog	LARP7	novel	2286	13	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	47621	junction_2	217086.95909555268	NA	8	1	TRUE	NA	NA	NA	C	coding	516	1551	241	1791	25.0	-35	True	AATAAA	-16
PB.1100.2	chr1	+	2436	5	novel_not_in_catalog	SERTAD4	novel	5219	4	NA	NA	-174	928	any annotated donor/acceptor	FALSE	canonical	1	875	junction_1	21124.806678109508	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	610	1680	100.0	-4661	False	GATAAA	-34
PB.6357.3	chr2	-	1672	8	incomplete-splice_match	DTNB	ENST00000407186.5	2275	19	-25	198986	10	272	3prime_fragment	FALSE	canonical	1	127391	junction_3	15808.914751894043	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	203	1117	100.0	-32	True	NA	NA
PB.8946.5	chr4	+	2216	14	novel_in_catalog	LARP7	novel	2286	13	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	1	3933	junction_2	226090.6297791157	NA	3	NA	TRUE	NA	NA	NA	C	coding	503	1512	453	1964	35.0	-32	True	AATAAA	-10
PB.6659.1	chr2	+	3168	4	full-splice_match	RPL31	ENST00000409320.7	716	4	-59	-2393	5	1544	multi-exon	FALSE	canonical	1	3969760	junction_1	3631314.716463722	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	83	448	80.0	-332	False	NA	NA
PB.6659.3	chr2	+	3741	2	incomplete-splice_match	RPL31	ENST00000409320.7	716	4	0	-1	0	0	intron_retention	FALSE	canonical	1	3969760	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	1	True	AATAAA	-15
PB.6659.2	chr2	+	455	5	full-splice_match	RPL31	ENST00000264258.7	1865	5	561	849	-7	0	multi-exon	FALSE	canonical	1	2597541	junction_4	4205906.923283275	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	41	418	5.0	-16	True	AATAAA	-14
PB.8946.6	chr4	+	2289	14	novel_in_catalog	LARP7	novel	2286	13	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	1	3667	junction_2	252139.99064511905	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	244	2031	25.0	-28	True	AATAAA	-16
PB.534.11	chr1	+	2956	11	novel_in_catalog	CDC7	novel	3173	12	NA	NA	-36	-3	no_combination_of_known_junctions	FALSE	canonical	1	3615	junction_6	58130.33376310513	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	827	1630	25.0	-11	True	AATAAA	-19
PB.8184.9	chr3	-	3206	11	novel_in_catalog	ACTR8	novel	3629	13	NA	NA	50	-1	intron_retention	FALSE	canonical	1	10450	junction_5	85217.09610195598	NA	4	NA	TRUE	NA	NA	NA	C	coding	235	708	2277	2984	20.0	-1	True	AATAAA	-17
PB.8946.7	chr4	+	1145	8	incomplete-splice_match	LARP7	ENST00000344442.9	2286	13	192	9835	-9	302	3prime_fragment	FALSE	canonical	1	370357	junction_2	117489.25878859682	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1059	87	1145	75.0	-15	True	NA	NA
PB.11499.2	chr9	-	3927	12	full-splice_match	SMU1	ENST00000397149.3	7122	12	-14	3209	-14	-3209	multi-exon	FALSE	canonical	1	110256	junction_7	184835.58098487565	NA	2	NA	TRUE	NA	NA	NA	C	coding	513	1542	66	1607	25.0	-3	True	ATTAAA	-27
PB.11259.1	chr8	-	533	4	full-splice_match	RPL30	ENST00000521291.5	575	4	37	5	37	-5	multi-exon	FALSE	canonical	1	15590108	junction_1	5781153.346591972	NA	0	NA	TRUE	NA	NA	NA	A	coding	115	348	111	458	40.0	623	False	AATAAA	-14
PB.8946.1	chr4	+	2096	13	full-splice_match	LARP7	ENST00000344442.9	2286	13	189	1	-12	-1	multi-exon	FALSE	canonical	1	370357	junction_2	113692.735932907	NA	0	NA	TRUE	NA	NA	NA	C	coding	582	1749	90	1838	25.0	-18	True	AATAAA	-16
PB.9543.23	chr5	-	3432	27	incomplete-splice_match	LARS	ENST00000394434.6	4766	32	12	15237	1	808	3prime_fragment	FALSE	canonical	1	407291	junction_22	211754.57459307622	NA	3	NA	TRUE	NA	NA	NA	C	coding	1013	3042	156	3197	20.0	1	True	NA	NA
PB.455.3	chr1	+	2254	6	full-splice_match	AK4	ENST00000497030.5	834	6	-22	-1398	-22	599	multi-exon	FALSE	canonical	1	102	junction_5	16019.150759013413	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	270	941	25.0	-1519	False	AATAAA	-10
PB.11578.2	chr9	-	3417	2	intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4913	junction_1	0.0	NA	7	NA	FALSE	NA	NA	NA	A	coding	103	312	1364	1675	15.0	4374	False	NA	NA
PB.11578.3	chr9	-	2848	5	intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	525	junction_4	1670.999607271049	NA	6	NA	FALSE	NA	NA	NA	A	coding	49	150	307	456	15.0	4421	False	NA	NA
PB.9543.22	chr5	-	3379	31	incomplete-splice_match	LARS	ENST00000394434.6	4766	32	37	7409	0	3532	3prime_fragment	FALSE	canonical	1	407291	junction_26	226432.9693507453	NA	0	NA	TRUE	NA	NA	NA	C	coding	1083	3249	131	3379	50.0	26	True	NA	NA
PB.11780.13	chr9	+	2938	12	novel_not_in_catalog	NEK6	novel	2578	10	NA	NA	-8	0	any annotated donor/acceptor	FALSE	canonical	1	2489	junction_1	300468.05092548305	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	404	1447	30.0	4	True	AATAAA	-41
PB.8397.19	chr3	+	3371	29	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	41	-245	combination_of_known_junctions	FALSE	canonical	1	32044	junction_1	257816.54273275088	NA	1	NA	TRUE	NA	NA	NA	C	coding	949	2850	345	3194	65.0	-28	True	NA	NA
PB.884.8	chr1	+	2399	16	full-splice_match	ATF6	ENST00000367942.3	7496	16	52	5045	52	-5045	multi-exon	FALSE	canonical	1	313565	junction_1	52259.69277853311	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	16	2028	35.0	5	True	TTTAAA	-30
PB.7525.1	chr21	+	1372	5	full-splice_match	WRB	ENST00000649170.1	1534	5	-28	190	-28	-44	multi-exon	FALSE	canonical	1	246724	junction_1	210388.85196048292	NA	1	NA	TRUE	NA	NA	NA	C	coding	174	525	88	612	30.0	-28	True	AAAACA	-31
PB.5036.9	chr17	-	3168	21	novel_in_catalog	UBTF	novel	4684	20	NA	NA	-37	6	combination_of_known_junctions	FALSE	canonical	1	112785	junction_20	334089.72287866025	NA	0	NA	TRUE	NA	NA	NA	C	coding	764	2295	220	2514	5.0	-13	True	NA	NA
PB.7525.3	chr21	+	1268	5	full-splice_match	WRB	ENST00000380708.5	1464	5	6	190	6	-44	multi-exon	FALSE	canonical	1	73333	junction_1	274857.57054552366	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	86	508	30.0	-21	True	AAAACA	-31
PB.5036.6	chr17	-	4600	21	novel_not_in_catalog	UBTF	novel	4684	20	NA	NA	357	-3	any annotated donor/acceptor	FALSE	canonical	1	2355	junction_20	346434.58748238464	NA	1	NA	TRUE	NA	NA	NA	C	coding	764	2295	100	2394	10.0	0	True	AATAAA	-17
PB.5036.5	chr17	-	4627	20	full-splice_match	UBTF	ENST00000343638.9	4684	20	54	3	54	-3	multi-exon	FALSE	canonical	1	112785	junction_19	317018.92068409163	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	238	2421	10.0	-31	True	AATAAA	-17
PB.11637.15	chr9	+	4013	4	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	12849	junction_1	283851.19569982827	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	203	598	30.0	-21	True	AATAAA	-13
PB.5036.3	chr17	-	4576	20	novel_in_catalog	UBTF	novel	4684	20	NA	NA	308	-2	combination_of_known_junctions	FALSE	canonical	1	26945	junction_19	327956.79401791585	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	186	2369	10.0	-37	True	AATAAA	-18
PB.5036.2	chr17	-	4730	21	novel_in_catalog	UBTF	novel	4684	20	NA	NA	-46	-2	combination_of_known_junctions	FALSE	canonical	1	112785	junction_20	334089.72287866025	NA	3	NA	TRUE	NA	NA	NA	C	coding	764	2295	229	2523	10.0	-22	True	AATAAA	-18
PB.5036.1	chr17	-	4499	20	novel_not_in_catalog	UBTF	novel	4684	20	NA	NA	349	-1	any annotated donor/acceptor	TRUE	canonical	1	2355	junction_19	331227.95394909225	NA	2	NA	TRUE	NA	NA	NA	C	coding	727	2184	108	2291	15.0	-8	True	AATAAA	-19
PB.9863.8	chr6	+	3285	4	full-splice_match	TCF19	ENST00000376257.7	3290	4	4	1	-1	-1	multi-exon	FALSE	canonical	1	95006	junction_1	94680.6717586365	NA	2	NA	TRUE	NA	NA	NA	C	coding	345	1038	751	1788	10.0	-43	True	NA	NA
PB.6357.1	chr2	-	2370	20	full-splice_match	DTNB	ENST00000288642.12	2464	20	94	0	-3	0	multi-exon	FALSE	canonical	1	47836	junction_3	33006.42572401308	NA	0	NA	TRUE	NA	NA	NA	C	coding	620	1863	170	2032	15.0	1	True	AAAAAG	-5
PB.8794.3	chr4	+	2555	19	full-splice_match	SRP72	ENST00000642900.1	3855	19	0	1300	0	-34	multi-exon	FALSE	canonical	1	236782	junction_7	232883.1053351779	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	20	2035	65.0	-17	True	AATACA	-30
PB.11625.19	chr9	-	2751	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-25	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	837804.5437126092	NA	10	1	TRUE	NA	NA	NA	B	coding	457	1374	205	1578	15.0	-8	True	AATAAA	-21
PB.715.9	chr1	-	5060	1	genic	OTUD7B	novel	NA	NA	NA	NA	-56	-44746	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-7	True	NA	NA
PB.8794.2	chr4	+	1530	15	novel_in_catalog	SRP72	novel	4136	19	NA	NA	-3	-115	combination_of_known_junctions	FALSE	canonical	1	10592	junction_8	276871.1404786788	NA	0	NA	TRUE	NA	NA	NA	C	coding	502	1506	23	1528	30.0	-20	True	NA	NA
PB.715.7	chr1	-	3334	12	full-splice_match	OTUD7B	ENST00000581312.5	8872	12	-91	5629	-91	3850	multi-exon	FALSE	canonical	1	82215	junction_11	26174.131731239864	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2532	387	2918	40.0	-42	True	AATAAA	-22
PB.9543.29	chr5	-	3838	15	incomplete-splice_match	LARS	ENST00000394434.6	4766	32	10	34406	0	-3957	3prime_fragment	FALSE	canonical	1	407291	junction_10	152306.8429970886	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	158	1795	15.0	-1	True	NA	NA
PB.715.5	chr1	-	3962	12	full-splice_match	OTUD7B	ENST00000581312.5	8872	12	-79	4989	-79	4490	multi-exon	FALSE	canonical	1	82215	junction_11	26174.131731239864	NA	1	NA	TRUE	NA	NA	NA	C	coding	843	2532	375	2906	35.0	-30	True	AATAAA	-26
PB.715.4	chr1	-	5415	12	novel_not_in_catalog	OTUD7B	novel	8872	12	NA	NA	3748	-3451	any annotated donor/acceptor	FALSE	canonical	1	762	junction_11	44880.502000698594	NA	1	NA	TRUE	NA	NA	NA	C	coding	843	2532	290	2821	15.0	3798	False	AATAAA	-28
PB.7215.5	chr20	+	2092	8	novel_not_in_catalog	GINS1	novel	3249	7	NA	NA	-39	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	70762.60405621267	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	134	724	25.0	-41	True	NA	NA
PB.8794.1	chr4	+	1998	19	full-splice_match	SRP72	ENST00000642900.1	3855	19	-18	1875	-18	-22	multi-exon	FALSE	canonical	1	236782	junction_7	232883.1053351779	NA	0	NA	TRUE	NA	NA	NA	C	coding	653	1959	38	1996	70.0	-35	True	GGGGCT	-6
PB.715.1	chr1	-	6381	12	full-splice_match	OTUD7B	ENST00000581312.5	8872	12	-32	2523	-32	-2523	multi-exon	FALSE	canonical	1	82215	junction_11	26174.131731239864	NA	4	1	TRUE	NA	NA	NA	C	coding	843	2532	328	2859	45.0	17	True	AATAAA	-13
PB.9543.28	chr5	-	3406	16	novel_not_in_catalog	LARS	novel	4766	32	NA	NA	20	-1607	intron_retention	TRUE	canonical	0	0	junction_1	233404.58361693658	NA	3	NA	TRUE	NA	NA	NA	C	coding	545	1638	111	1748	85.0	46	True	NA	NA
PB.12155.4	chrX	-	3312	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	28	1035	30.0	-7	True	AATAAA	-13
PB.5263.10	chr17	-	2551	13	incomplete-splice_match	ACOX1	ENST00000293217.9	7514	14	198	6220	12	-1150	3prime_fragment	FALSE	canonical	1	159801	junction_11	71934.1398600812	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	93	2072	85.0	-32	True	NA	NA
PB.991.6	chr1	+	3427	7	full-splice_match	RNF2	ENST00000367510.7	3606	7	172	7	0	-7	multi-exon	FALSE	canonical	1	78096	junction_5	82980.27115659614	NA	4	NA	TRUE	NA	NA	NA	C	coding	336	1011	117	1127	30.0	-22	True	NA	NA
PB.12155.5	chrX	-	3367	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	26	1033	30.0	-5	True	AATAAA	-13
PB.11092.4	chr8	+	4605	18	novel_not_in_catalog	DDHD2	novel	568	4	NA	NA	-62	0	any annotated donor/acceptor	FALSE	canonical	1	222	junction_1	102749.31248317288	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	196	2412	25.0	1	True	AGTAAA	-16
PB.7923.2	chr3	-	2537	7	novel_in_catalog	RPUSD3	novel	756	4	NA	NA	1	11	intron_retention	FALSE	canonical	1	383169	junction_4	77564.54897195124	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	385	1044	35.0	-10	True	NA	NA
PB.12155.6	chrX	-	2831	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	26	1033	25.0	-5	True	AATAAA	-12
PB.8794.6	chr4	+	1658	16	incomplete-splice_match	SRP72	ENST00000642900.1	3855	19	1	12113	0	-115	3prime_fragment	FALSE	canonical	1	236782	junction_7	247722.60536728488	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1638	19	1656	30.0	-16	True	NA	NA
PB.10771.6	chr7	+	2787	15	novel_in_catalog	RINT1	novel	2976	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2256	junction_2	69358.45213862782	NA	1	NA	TRUE	NA	NA	NA	C	coding	761	2286	136	2421	30.0	-20	True	NA	NA
PB.10771.7	chr7	+	2692	15	full-splice_match	RINT1	ENST00000257700.6	2976	15	103	181	4	-180	multi-exon	FALSE	canonical	1	138273	junction_3	44325.714495432694	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	129	2507	75.0	-13	True	ATTAAA	-39
PB.10771.4	chr7	+	2708	14	novel_in_catalog	RINT1	novel	2976	15	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	1274	junction_4	67157.75613650252	NA	9	NA	TRUE	NA	NA	NA	C	coding	734	2205	138	2342	30.0	-22	True	NA	NA
PB.12155.7	chrX	-	2713	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	22	1029	30.0	-1	True	AATAAA	-13
PB.10771.2	chr7	+	2753	15	novel_in_catalog	RINT1	novel	2976	15	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	6454	junction_3	67090.68151546222	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2145	242	2386	30.0	-29	True	NA	NA
PB.10771.3	chr7	+	2851	15	full-splice_match	RINT1	ENST00000257700.6	2976	15	126	-1	-1	1	multi-exon	FALSE	canonical	1	138273	junction_3	44325.714495432694	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	106	2484	30.0	10	True	NA	NA
PB.8760.16	chr4	-	4066	36	full-splice_match	ATP8A1	ENST00000264449.14	8209	36	-12	4155	0	443	multi-exon	FALSE	canonical	1	76866	junction_29	47825.682042387976	NA	0	NA	TRUE	NA	NA	NA	C	coding	1149	3450	233	3682	30.0	-13	True	ATTAAA	-15
PB.10771.1	chr7	+	3014	16	novel_not_in_catalog	RINT1	novel	2976	15	NA	NA	-6	0	any annotated donor/acceptor	TRUE	canonical	1	1734	junction_2	93927.96146466007	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	1398	2648	30.0	-97	False	NA	NA
PB.8760.18	chr4	-	2546	24	incomplete-splice_match	ATP8A1	ENST00000264449.14	8209	36	2	77070	2	-26089	3prime_fragment	FALSE	canonical	1	76866	junction_17	47996.8741223433	NA	3	1	TRUE	NA	NA	NA	C	coding	760	2283	219	2501	35.0	1	True	AGTAAA	-15
PB.8760.19	chr4	-	2929	24	novel_not_in_catalog	ATP8A1	novel	5918	14	NA	NA	-32	-42908	any annotated donor/acceptor	FALSE	canonical	1	4303	junction_1	58195.96419331338	NA	0	NA	TRUE	NA	NA	NA	C	coding	745	2238	265	2502	10.0	-45	True	AATAAA	-12
PB.8794.4	chr4	+	1442	14	incomplete-splice_match	SRP72	ENST00000642900.1	3855	19	1	13245	0	1035	3prime_fragment	FALSE	canonical	1	236782	junction_7	223744.5298125817	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1422	19	1440	30.0	-16	True	NA	NA
PB.10771.8	chr7	+	2569	13	novel_in_catalog	RINT1	novel	2976	15	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	1413	junction_12	74483.34333072208	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	125	2203	30.0	-9	True	NA	NA
PB.8762.13	chr4	+	3728	15	novel_in_catalog	GUF1	novel	3970	16	NA	NA	24	4	no_combination_of_known_junctions	FALSE	canonical	1	4644	junction_1	74741.95413421447	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	797	1726	25.0	0	True	NA	NA
PB.3407.19	chr14	-	1722	8	incomplete-splice_match	MIS18BP1	ENST00000310806.8	4777	17	201	28081	-3	1302	3prime_fragment	FALSE	canonical	1	81783	junction_7	68564.78838801938	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1464	259	1722	65.0	280	False	AATAAA	-45
PB.3407.18	chr14	-	1850	9	novel_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-21	1304	combination_of_known_junctions	FALSE	canonical	1	23280	junction_8	100030.68496185308	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1464	385	1848	65.0	0	True	TTTAAA	-32
PB.12155.2	chrX	-	2767	11	novel_not_in_catalog	MAGT1	novel	4047	10	NA	NA	-14	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	214873.11574426896	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	45	1052	25.0	39	False	AATAAA	-14
PB.11637.17	chr9	+	4689	8	novel_in_catalog	SPIN1	novel	4484	6	NA	NA	5	-3	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_2	240458.00157361265	NA	0	NA	TRUE	NA	NA	NA	C	coding	262	789	487	1275	30.0	-9	True	AATAAA	-12
PB.3407.11	chr14	-	2826	12	novel_in_catalog	MIS18BP1	novel	4777	17	NA	NA	1	2703	combination_of_known_junctions	FALSE	canonical	1	23280	junction_11	93821.04621252751	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2463	363	2825	55.0	284	False	AAGAAA	-39
PB.3407.10	chr14	-	3606	14	incomplete-splice_match	MIS18BP1	ENST00000310806.8	4777	17	205	6990	1	-69	3prime_fragment	FALSE	canonical	1	81783	junction_13	61575.25706764647	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	255	3410	30.0	284	False	AATAAA	-19
PB.3407.13	chr14	-	2606	12	novel_in_catalog	MIS18BP1	novel	4777	17	NA	NA	3	2485	combination_of_known_junctions	FALSE	canonical	1	23280	junction_11	93821.04621252751	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	361	2604	70.0	286	False	AAGAAA	-18
PB.3407.12	chr14	-	2806	13	novel_not_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-8	2568	any annotated donor/acceptor	FALSE	canonical	1	2753	junction_11	110148.01569428697	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	478	2805	70.0	275	False	NA	NA
PB.3407.15	chr14	-	2548	11	novel_not_in_catalog	MIS18BP1	novel	4777	17	NA	NA	-9	2568	any annotated donor/acceptor	FALSE	canonical	1	2613	junction_5	96056.46347331344	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2283	265	2547	70.0	274	False	NA	NA
PB.3407.14	chr14	-	2503	11	incomplete-splice_match	MIS18BP1	ENST00000310806.8	4777	17	202	21151	-2	2485	3prime_fragment	FALSE	canonical	1	81783	junction_10	64371.060346167986	NA	0	NA	TRUE	NA	NA	NA	C	coding	748	2244	258	2501	70.0	281	False	AAGAAA	-18
PB.3407.17	chr14	-	2039	10	incomplete-splice_match	MIS18BP1	ENST00000310806.8	4777	17	201	23612	-3	24	3prime_fragment	FALSE	canonical	1	81783	junction_9	67820.62487634041	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1779	259	2037	55.0	280	False	TATAAA	-9
PB.3407.16	chr14	-	2161	11	novel_in_catalog	MIS18BP1	novel	4777	17	NA	NA	3	44	combination_of_known_junctions	FALSE	canonical	1	23280	junction_10	97916.79651423448	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1800	361	2160	65.0	286	False	TATAAA	-29
PB.2717.10	chr12	+	3384	23	novel_in_catalog	USP15	novel	14950	21	NA	NA	-8	-2	combination_of_known_junctions	TRUE	canonical	1	41930	junction_9	166442.56262670257	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	1172	3118	15.0	-15	True	AATAAA	-14
PB.2717.11	chr12	+	3313	22	novel_in_catalog	USP15	novel	14950	21	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	41930	junction_8	169782.69382869353	NA	1	NA	TRUE	NA	NA	NA	C	coding	648	1947	1085	3031	25.0	-15	True	AATAAA	-30
PB.2717.12	chr12	+	3274	23	novel_in_catalog	USP15	novel	14950	21	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	909	junction_3	175111.6203338673	NA	1	NA	TRUE	NA	NA	NA	C	coding	989	2970	24	2993	25.0	-12	True	AATAAA	-29
PB.2717.13	chr12	+	4857	23	novel_in_catalog	USP15	novel	14950	21	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	41930	junction_9	166442.56262670257	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	1168	3114	20.0	-11	True	AATAAA	-16
PB.2795.8	chr12	-	2763	10	novel_in_catalog	POC1B	novel	5840	2	NA	NA	-25	-10	combination_of_known_junctions	FALSE	canonical	1	31587	junction_2	57747.598026045875	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	373	1338	45.0	-52	True	AATAAA	-15
PB.2717.15	chr12	+	4763	22	novel_in_catalog	USP15	novel	14950	21	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	41930	junction_8	169782.69382869353	NA	2	NA	TRUE	NA	NA	NA	C	coding	648	1947	1074	3020	20.0	-4	True	AATAAA	-16
PB.2717.16	chr12	+	3016	21	novel_in_catalog	USP15	novel	14950	21	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	272	junction_10	154473.35377064228	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	15	2735	25.0	-3	True	AATAAA	-29
PB.2717.17	chr12	+	3522	22	full-splice_match	USP15	ENST00000280377.9	4748	22	46	1180	4	148	multi-exon	FALSE	canonical	1	199851	junction_6	122294.57169881964	NA	1	NA	TRUE	NA	NA	NA	C	coding	981	2946	13	2958	55.0	-1	True	ATTAAA	-18
PB.2717.18	chr12	+	4311	21	full-splice_match	USP15	ENST00000353364.7	14950	21	66	10573	-3	-303	multi-exon	FALSE	canonical	1	134204	junction_6	122472.50667495745	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2859	12	2870	35.0	0	True	AATAAA	-19
PB.2717.19	chr12	+	3147	21	full-splice_match	USP15	ENST00000353364.7	14950	21	66	11737	-3	-5	multi-exon	FALSE	canonical	1	134204	junction_6	122472.50667495745	NA	2	NA	TRUE	NA	NA	NA	C	coding	952	2859	12	2870	20.0	0	True	AATAAA	-25
PB.2795.6	chr12	-	2882	11	novel_in_catalog	POC1B	novel	5840	2	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	1	31587	junction_2	57048.90093253332	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	102	1457	45.0	1	True	AATAAA	-15
PB.2795.7	chr12	-	2819	11	novel_in_catalog	POC1B	novel	5840	2	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	1	52110	junction_9	46213.72519338816	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	348	1394	45.0	-27	True	AATAAA	-15
PB.6478.27	chr2	+	3365	11	incomplete-splice_match	VRK2	ENST00000417641.6	2381	16	177229	-1796	38005	1747	5prime_fragment	FALSE	canonical	1	53848	junction_9	98596.30003529544	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	170	1006	25.0	8754	False	AGTAAA	-33
PB.2795.1	chr12	-	2880	12	full-splice_match	POC1B	ENST00000313546.7	3001	12	111	10	80	-10	multi-exon	FALSE	canonical	1	63776	junction_10	47107.137104671805	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	19	1455	45.0	-10	True	AATAAA	-15
PB.6478.25	chr2	+	5026	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	-61	3163	intron_retention	FALSE	canonical	1	53848	junction_12	100113.69601058293	NA	1	NA	TRUE	NA	NA	NA	C	coding	396	1191	61	1251	80.0	0	True	NA	NA
PB.6478.24	chr2	+	3585	13	novel_not_in_catalog	VRK2	novel	2657	19	NA	NA	-61	1722	intron_retention	FALSE	canonical	1	7017	junction_4	98748.09722892554	NA	0	NA	TRUE	NA	NA	NA	C	coding	388	1167	470	1636	70.0	0	True	AGTAAA	-8
PB.10999.8	chr8	+	5416	29	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-6	3191	any annotated donor/acceptor	FALSE	canonical	1	15671	junction_4	206915.10213617623	NA	1	NA	TRUE	NA	NA	NA	C	coding	1501	4506	429	4934	25.0	8	True	NA	NA
PB.10999.9	chr8	+	1706	10	incomplete-splice_match	PCM1	ENST00000518537.5	2171	11	-96	2844	46	-12	3prime_fragment	FALSE	canonical	1	115325	junction_7	153432.07685785127	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1329	377	1705	70.0	-5743	False	NA	NA
PB.2997.12	chr12	-	2243	16	incomplete-splice_match	SBNO1	ENST00000267176.8	11121	32	-6	34599	-6	-27803	3prime_fragment	FALSE	canonical	1	84312	junction_15	103148.4741310096	NA	0	NA	TRUE	NA	NA	NA	B	coding	698	2094	150	2243	80.0	-13	True	NA	NA
PB.2997.13	chr12	-	2132	15	novel_in_catalog	SBNO1	novel	10981	31	NA	NA	0	-27803	no_combination_of_known_junctions	FALSE	canonical	1	7740	junction_13	123664.58997330362	NA	0	NA	TRUE	NA	NA	NA	B	coding	663	1989	144	2132	80.0	-7	True	NA	NA
PB.2997.10	chr12	-	2380	17	novel_in_catalog	SBNO1	novel	10981	31	NA	NA	-23	-24936	no_combination_of_known_junctions	FALSE	canonical	1	974	junction_16	122943.7012594586	NA	1	NA	TRUE	NA	NA	NA	B	coding	679	2037	344	2380	80.0	351	False	NA	NA
PB.2997.11	chr12	-	2259	16	novel_in_catalog	SBNO1	novel	10981	31	NA	NA	-4	-24936	no_combination_of_known_junctions	FALSE	canonical	1	446	junction_15	119627.12855361121	NA	0	NA	TRUE	NA	NA	NA	B	coding	679	2037	223	2259	80.0	-11	True	NA	NA
PB.10999.2	chr8	+	4121	23	incomplete-splice_match	PCM1	ENST00000519253.5	6443	39	-34	55223	4	-62	3prime_fragment	FALSE	canonical	1	203848	junction_6	109218.42008006306	NA	1	NA	TRUE	NA	NA	NA	C	coding	1278	3834	286	4119	40.0	1	True	ACTAAA	-12
PB.10999.1	chr8	+	6462	39	full-splice_match	PCM1	ENST00000325083.12	6820	39	144	214	-6	-4	multi-exon	FALSE	canonical	1	192825	junction_24	216079.1720245036	NA	1	NA	TRUE	NA	NA	NA	C	coding	2024	6075	296	6370	30.0	-9	True	AATAAA	-22
PB.10999.6	chr8	+	4474	24	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-6	-8	combination_of_known_junctions	FALSE	canonical	1	35574	junction_2	187853.75263792637	NA	0	NA	TRUE	NA	NA	NA	C	coding	1297	3891	582	4472	60.0	8	True	GATAAA	-12
PB.10999.7	chr8	+	5459	28	novel_not_in_catalog	PCM1	novel	6820	39	NA	NA	-6	3192	any annotated donor/acceptor	FALSE	canonical	1	45786	junction_27	171176.1162611388	NA	0	NA	TRUE	NA	NA	NA	C	coding	1515	4548	429	4976	20.0	8	True	NA	NA
PB.10999.4	chr8	+	2803	16	novel_in_catalog	PCM1	novel	6820	39	NA	NA	3	269	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	152428.81980722092	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2367	437	2803	60.0	0	True	AAAACA	-8
PB.11420.2	chr9	-	3474	6	novel_not_in_catalog	WASHC1	novel	1827	11	NA	NA	4732	1	intron_retention	TRUE	canonical	1	1267	junction_5	15691.992513380828	NA	1	NA	TRUE	NA	NA	NA	B	coding	197	594	2	595	35.0	NA	False	AATAAA	-12
PB.7513.11	chr21	+	4110	17	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	12	-19	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	177524.6273324559	NA	0	NA	TRUE	NA	NA	NA	B	coding	918	2757	23	2779	30.0	4	True	AATAAA	-17
PB.7513.10	chr21	+	2166	15	novel_not_in_catalog	MORC3	novel	1290	5	NA	NA	-8	377	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	177228.03481236842	NA	1	NA	TRUE	NA	NA	NA	B	coding	708	2124	43	2166	65.0	-16	True	NA	NA
PB.5175.11	chr17	-	1633	13	full-splice_match	CCDC47	ENST00000225726.9	3466	13	155	1678	-50	-501	multi-exon	FALSE	canonical	1	526054	junction_12	252003.7012037913	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1404	229	1632	65.0	-24	True	NA	NA
PB.5175.10	chr17	-	1958	13	full-splice_match	CCDC47	ENST00000225726.9	3466	13	161	1347	-44	-170	multi-exon	FALSE	canonical	1	526054	junction_12	252003.7012037913	NA	1	NA	TRUE	NA	NA	NA	C	coding	483	1452	223	1674	65.0	-18	True	TATAAA	-41
PB.5175.13	chr17	-	1408	11	incomplete-splice_match	CCDC47	ENST00000582252.1	1719	12	-26	549	-26	461	3prime_fragment	FALSE	canonical	1	526054	junction_10	235100.0988521485	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1203	205	1407	30.0	0	True	GATAAA	-29
PB.5175.12	chr17	-	1503	12	full-splice_match	CCDC47	ENST00000582252.1	1719	12	-20	236	-20	-236	multi-exon	FALSE	canonical	1	526054	junction_11	247782.79168071965	NA	2	NA	TRUE	NA	NA	NA	C	coding	435	1305	199	1503	65.0	6	True	NA	NA
PB.10638.4	chr7	+	2603	15	novel_in_catalog	CD36	novel	2365	17	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	25248	junction_14	216873.0874558615	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	288	1706	15.0	1	True	ATTAAA	-12
PB.2789.3	chr12	-	2727	24	incomplete-splice_match	CEP290	ENST00000552810.5	7948	54	128	58051	-11	2061	3prime_fragment	FALSE	canonical	1	41742	junction_2	14202.099464595663	NA	0	NA	TRUE	NA	NA	NA	B	coding	837	2511	217	2727	75.0	-1	True	AAAACA	-7
PB.2789.2	chr12	-	2948	25	incomplete-splice_match	CEP290	ENST00000552810.5	7948	54	128	57740	-11	2372	3prime_fragment	FALSE	canonical	1	41742	junction_3	14095.161206694598	NA	0	NA	TRUE	NA	NA	NA	B	coding	910	2730	217	2946	70.0	-1	True	AATATA	-32
PB.2789.1	chr12	-	5608	35	incomplete-splice_match	CEP290	ENST00000309041.11	7616	53	26835	3	-10284	-1	5prime_fragment	TRUE	canonical	1	41742	junction_32	31450.18994403008	NA	0	NA	TRUE	NA	NA	NA	B	coding	1610	4833	609	5441	45.0	NA	False	AATAAA	-26
PB.8987.2	chr4	-	1887	12	full-splice_match	SLC7A11	ENST00000280612.9	9645	12	0	7758	0	-11	multi-exon	FALSE	canonical	1	174406	junction_1	56439.92283557757	NA	0	NA	TRUE	NA	NA	NA	C	coding	501	1506	281	1786	50.0	-1	True	NA	NA
PB.7199.1	chr20	-	9513	40	full-splice_match	RALGAPA2	ENST00000202677.11	6152	40	-152	-3209	-152	-6	multi-exon	TRUE	canonical	1	61305	junction_39	27700.564564273544	NA	7	1	TRUE	NA	NA	NA	C	coding	1873	5622	161	5782	30.0	2	True	AATAAA	-19
PB.2789.5	chr12	-	1872	17	incomplete-splice_match	CEP290	ENST00000552810.5	7948	54	128	69518	-11	-7336	3prime_fragment	FALSE	canonical	1	56033	junction_4	13316.247954654635	NA	0	NA	TRUE	NA	NA	NA	B	coding	552	1656	217	1872	65.0	-1	True	NA	NA
PB.2789.4	chr12	-	2589	22	incomplete-splice_match	CEP290	ENST00000552810.5	7948	54	123	62181	-16	1	3prime_fragment	FALSE	canonical	1	56033	junction_9	12171.31584622515	NA	0	NA	TRUE	NA	NA	NA	B	coding	789	2367	222	2588	35.0	-6	True	AATACA	-12
PB.6330.3	chr2	-	3071	1	novel_in_catalog	RDH14	novel	1587	2	NA	NA	27	-2460	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	155	468	81	548	70.0	0	True	NA	NA
PB.6330.2	chr2	-	5946	1	novel_in_catalog	RDH14	novel	1587	2	NA	NA	5	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	186	561	4924	5484	15.0	-22	True	AATAAA	-16
PB.6330.1	chr2	-	1559	2	full-splice_match	RDH14	ENST00000381249.3	1587	2	25	3	24	-3	multi-exon	FALSE	canonical	1	164747	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	84	1094	20.0	-3	True	AATAAA	-19
PB.1102.7	chr1	+	3737	11	full-splice_match	RCOR3	ENST00000367006.8	2525	11	215	-1427	-59	-367	multi-exon	FALSE	canonical	1	68064	junction_10	65927.91245147992	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	80	1378	20.0	0	True	ATTAAA	-14
PB.1102.6	chr1	+	4218	11	full-splice_match	RCOR3	ENST00000367006.8	2525	11	88	-1781	-21	-13	multi-exon	FALSE	canonical	1	68064	junction_10	65927.91245147992	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	207	1505	50.0	-2	True	NA	NA
PB.1102.5	chr1	+	4469	12	full-splice_match	RCOR3	ENST00000419091.6	2041	12	-66	-2362	-21	-4	multi-exon	FALSE	canonical	1	137611	junction_10	50599.21168464424	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	207	1856	35.0	-2	True	NA	NA
PB.1102.4	chr1	+	3978	12	full-splice_match	RCOR3	ENST00000419091.6	2041	12	61	-1998	-59	-368	multi-exon	FALSE	canonical	1	137611	junction_10	50599.21168464424	NA	8	1	TRUE	NA	NA	NA	C	coding	549	1650	80	1729	15.0	0	True	ATTAAA	-13
PB.11185.29	chr8	-	3022	12	novel_in_catalog	STAU2	novel	2646	12	NA	NA	-1	-107	combination_of_known_junctions	FALSE	canonical	1	1156	junction_8	102146.24344560885	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	447	1670	55.0	590	False	AATAAA	-10
PB.11185.28	chr8	-	3030	12	novel_in_catalog	STAU2	novel	2646	12	NA	NA	0	-106	combination_of_known_junctions	FALSE	canonical	1	14708	junction_10	102694.40337627906	NA	1	NA	TRUE	NA	NA	NA	C	coding	511	1536	142	1677	50.0	-1	True	AATAAA	-11
PB.11185.25	chr8	-	3191	13	incomplete-splice_match	STAU2	ENST00000524300.5	3065	15	48	130283	-1	-107	3prime_fragment	FALSE	canonical	1	14708	junction_10	95368.46945615581	NA	3	NA	TRUE	NA	NA	NA	C	coding	511	1536	304	1839	55.0	581	False	AATAAA	-10
PB.6470.1	chr2	+	3376	1	genic	RPS27A	novel	NA	NA	NA	NA	-34	166	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-71	False	NA	NA
PB.6470.2	chr2	+	536	6	full-splice_match	RPS27A	ENST00000272317.10	1071	6	286	249	0	-5	multi-exon	FALSE	canonical	1	743271	junction_1	996674.8853058554	NA	1	1	TRUE	NA	NA	NA	C	coding	156	471	39	509	20.0	-27	True	AATAAA	-11
PB.6470.3	chr2	+	2907	1	novel_in_catalog	RPS27A	novel	1071	6	NA	NA	6	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-15	True	AATAAA	-13
PB.11185.21	chr8	-	3944	11	incomplete-splice_match	STAU2	ENST00000521210.5	1950	14	-49	128398	-1	-6	3prime_fragment	FALSE	canonical	1	3506	junction_8	96712.34081336259	NA	0	NA	TRUE	NA	NA	NA	C	coding	407	1224	325	1548	45.0	581	False	AGTAAA	-17
PB.11185.23	chr8	-	4052	13	incomplete-splice_match	STAU2	ENST00000524300.5	3065	15	64	129406	6	9	3prime_fragment	FALSE	canonical	1	14708	junction_10	95368.46945615581	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	288	1823	25.0	597	False	AATAAA	-23
PB.8452.7	chr3	-	3375	19	full-splice_match	PLOD2	ENST00000360060.7	3665	19	115	175	-60	-175	multi-exon	FALSE	canonical	1	187701	junction_6	153234.26431404718	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	64	2277	35.0	-44	True	TATAAA	-15
PB.1071.3	chr1	+	1258	5	novel_not_in_catalog	BX571818.1	novel	527	4	NA	NA	50	-48	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	-278	False	NA	NA
PB.7641.20	chr22	+	2711	4	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5056	10918	any annotated donor/acceptor	FALSE	canonical	1	1905	junction_3	251866.75072744317	NA	3	NA	TRUE	NA	NA	NA	B	coding	135	408	368	775	25.0	12	True	AATAAA	-21
PB.7641.21	chr22	+	3089	5	novel_not_in_catalog	AC245060.4	novel	1121	8	NA	NA	-5036	-709	intron_retention	FALSE	canonical	1	122360	junction_4	190993.37243606124	NA	4	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	32	False	AGTAAA	-15
PB.1681.28	chr10	+	4848	20	novel_not_in_catalog	INPP5F	novel	5007	21	NA	NA	-28	-2	any annotated donor/acceptor	FALSE	canonical	1	18	junction_1	75259.56917402854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	373	3483	40.0	360	False	AATAAA	-21
PB.1681.29	chr10	+	5002	20	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	58	junction_1	75255.8313924986	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	526	3636	40.0	381	False	AATAAA	-22
PB.1681.26	chr10	+	5387	18	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	6253	junction_3	72512.72883110159	NA	19	1	TRUE	NA	NA	NA	C	coding	683	2052	138	2189	40.0	-16	True	AATAAA	-21
PB.1681.27	chr10	+	4909	20	novel_not_in_catalog	INPP5F	novel	5007	21	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	272	junction_14	77157.5438984987	NA	2	NA	TRUE	NA	NA	NA	C	coding	1139	3420	125	3544	40.0	-3	True	AATAAA	-21
PB.1681.24	chr10	+	4997	20	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	4	-7	no_combination_of_known_junctions	FALSE	canonical	1	775	junction_12	77034.03144137534	NA	1	NA	TRUE	NA	NA	NA	C	coding	646	1941	1697	3637	45.0	4	True	AATAAA	-16
PB.1681.25	chr10	+	3516	20	full-splice_match	INPP5F	ENST00000650623.1	4944	20	5	1423	5	-636	multi-exon	FALSE	canonical	1	56675	junction_1	70901.86298635804	NA	1	NA	TRUE	NA	NA	NA	C	coding	1114	3342	174	3515	60.0	5	True	NA	NA
PB.1681.22	chr10	+	4585	17	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	4	-1	no_combination_of_known_junctions	FALSE	canonical	1	781	junction_3	80973.63650094702	NA	0	NA	TRUE	NA	NA	NA	C	coding	1014	3045	175	3219	40.0	4	True	AATAAA	-22
PB.1681.23	chr10	+	4571	21	novel_in_catalog	INPP5F	novel	5007	21	NA	NA	4	14	no_combination_of_known_junctions	FALSE	canonical	1	2858	junction_3	79778.77277000129	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	546	3656	70.0	4	True	NA	NA
PB.1681.20	chr10	+	5076	20	full-splice_match	INPP5F	ENST00000361976.7	5112	20	37	-1	0	1	multi-exon	FALSE	canonical	1	56675	junction_1	70901.86298635804	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	179	3577	50.0	0	True	AATATA	-19
PB.1681.21	chr10	+	4675	18	full-splice_match	INPP5F	ENST00000648661.1	4535	18	-122	-18	1	-2	multi-exon	FALSE	canonical	1	661	junction_2	80964.991603467	NA	1	NA	TRUE	NA	NA	NA	C	coding	964	2895	416	3310	40.0	1	True	AATAAA	-21
PB.11874.4	chr9	+	2117	12	full-splice_match	GTF3C5	ENST00000372108.9	2110	12	-7	0	-7	0	multi-exon	FALSE	canonical	1	71207	junction_9	272681.4563092357	NA	0	NA	TRUE	NA	NA	NA	C	coding	526	1581	16	1596	10.0	-3	True	ATTAAA	-14
PB.470.10	chr1	+	6631	11	novel_in_catalog	SRSF11	novel	2385	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	826266	junction_2	443423.89155709685	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	4297	5436	30.0	-12	True	AATAAA	-13
PB.11874.3	chr9	+	2137	11	novel_in_catalog	GTF3C5	novel	1999	9	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	1	15518	junction_1	254328.09497937895	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	200	1618	15.0	-300	False	ATTAAA	-12
PB.7090.16	chr2	+	2027	6	full-splice_match	LRRFIP1	ENST00000478958.5	2869	6	841	1	-588	-1	multi-exon	FALSE	canonical	1	73141	junction_1	106350.9879739723	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	928	1245	25.0	4290	False	ATTAAA	-22
PB.11874.2	chr9	+	3187	11	novel_in_catalog	GTF3C5	novel	1999	9	NA	NA	-30	0	intron_retention	FALSE	canonical	1	158885	junction_8	228267.1522401986	NA	1	NA	TRUE	NA	NA	NA	C	coding	537	1614	39	1652	10.0	1	True	ATTAAA	-14
PB.6205.2	chr19	-	2326	8	full-splice_match	MBOAT7	ENST00000245615.5	2529	8	201	2	-45	-2	multi-exon	TRUE	canonical	1	363796	junction_2	259563.84172794837	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	281	1699	15.0	-35	True	AATAAA	-12
PB.6205.3	chr19	-	3585	6	novel_in_catalog	MBOAT7	novel	2033	7	NA	NA	-45	15	intron_retention	FALSE	canonical	1	633087	junction_4	228720.80566892028	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	281	1204	15.0	-35	True	NA	NA
PB.8955.2	chr4	+	6561	18	novel_in_catalog	USP53	novel	4233	2	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	16990	junction_3	52514.32043510842	NA	13	2	TRUE	NA	NA	NA	B	coding	1073	3222	1035	4256	20.0	0	True	GATAAA	-15
PB.6205.1	chr19	-	3930	7	novel_in_catalog	MBOAT7	novel	2033	7	NA	NA	-28	1	intron_retention	FALSE	canonical	1	633087	junction_5	211037.3359713605	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	55	978	20.0	-13	True	AATAAA	-11
PB.8955.4	chr4	+	5552	17	novel_in_catalog	USP53	novel	4233	2	NA	NA	-6	-7	no_combination_of_known_junctions	FALSE	canonical	1	56525	junction_2	41321.806615074245	NA	1	1	TRUE	NA	NA	NA	B	coding	1073	3222	911	4132	30.0	2	True	AATAAA	-15
PB.8955.5	chr4	+	5678	18	novel_in_catalog	USP53	novel	4233	2	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	16990	junction_3	52514.32043510842	NA	0	NA	TRUE	NA	NA	NA	B	coding	1073	3222	1031	4252	25.0	4	True	AATAAA	-21
PB.8955.6	chr4	+	6426	17	novel_in_catalog	USP53	novel	4233	2	NA	NA	6	0	no_combination_of_known_junctions	FALSE	canonical	1	56525	junction_2	41321.806615074245	NA	4	2	TRUE	NA	NA	NA	B	coding	1073	3222	899	4120	20.0	0	True	GATAAA	-16
PB.8955.7	chr4	+	3342	17	novel_in_catalog	USP53	novel	4233	2	NA	NA	7	-3402	combination_of_known_junctions	FALSE	canonical	1	16990	junction_3	53793.0553585916	NA	7	1	TRUE	NA	NA	NA	B	coding	774	2322	1020	3341	60.0	1	True	TATAAA	-32
PB.3099.12	chr13	+	3711	32	incomplete-splice_match	PDS5B	ENST00000450460.5	5246	34	2	5764	-1	-402	3prime_fragment	FALSE	canonical	1	104646	junction_1	63569.25758600127	NA	2	NA	TRUE	NA	NA	NA	C	coding	1216	3648	64	3711	45.0	0	True	NA	NA
PB.3099.13	chr13	+	3864	32	novel_in_catalog	PDS5B	novel	7497	35	NA	NA	0	-224	combination_of_known_junctions	FALSE	canonical	1	104646	junction_1	65522.213424246336	NA	1	NA	TRUE	NA	NA	NA	C	coding	1273	3819	45	3863	60.0	19	True	NA	NA
PB.3099.10	chr13	+	5296	35	full-splice_match	PDS5B	ENST00000315596.14	7497	35	89	2112	-27	-1	multi-exon	FALSE	canonical	1	104646	junction_1	64889.18121133662	NA	1	NA	TRUE	NA	NA	NA	C	coding	1447	4344	98	4441	30.0	3	True	AATAAA	-20
PB.3099.11	chr13	+	7200	35	novel_not_in_catalog	PDS5B	novel	7497	35	NA	NA	-14	-209	any annotated donor/acceptor	FALSE	canonical	1	565	junction_1	72572.86804867015	NA	2	NA	TRUE	NA	NA	NA	C	coding	1447	4344	99	4442	30.0	16	True	ATTAAA	-19
PB.5635.12	chr19	+	2401	8	incomplete-splice_match	KDM4B	ENST00000588361.1	3039	12	48711	-1	-4373	1	5prime_fragment	FALSE	canonical	1	2442	junction_7	105283.96363634679	NA	0	NA	TRUE	NA	NA	NA	C	coding	381	1146	87	1232	15.0	-13	True	ATTAAA	-17
PB.3200.1	chr13	+	1484	4	full-splice_match	CLN5	ENST00000377453.8	2629	4	-27	1172	-2	3	multi-exon	FALSE	canonical	1	244914	junction_1	18357.11809262736	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	79	1119	10.0	-27	True	AATAAA	-19
PB.3200.2	chr13	+	3270	4	full-splice_match	CLN5	ENST00000377453.8	2629	4	-2	-639	-2	639	multi-exon	FALSE	canonical	1	244914	junction_1	18357.11809262736	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	54	1094	90.0	-2	True	NA	NA
PB.3200.3	chr13	+	2540	4	full-splice_match	CLN5	ENST00000377453.8	2629	4	99	-10	23	10	multi-exon	FALSE	canonical	1	244914	junction_1	18357.11809262736	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	172	993	10.0	20	True	NA	NA
PB.11152.4	chr8	-	5312	26	novel_in_catalog	ASPH	novel	5268	25	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	221977	junction_24	791355.0786250127	NA	4	NA	TRUE	NA	NA	NA	C	coding	773	2322	189	2510	15.0	32	True	AATAAA	-18
PB.4541.3	chr16	+	2301	9	full-splice_match	DHODH	ENST00000219240.8	2426	9	1	124	1	-124	multi-exon	FALSE	canonical	1	92652	junction_1	35525.50169222632	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	21	1208	30.0	-5	True	CATAAA	-24
PB.4541.2	chr16	+	2065	9	full-splice_match	DHODH	ENST00000219240.8	2426	9	0	361	0	-361	multi-exon	FALSE	canonical	1	92652	junction_1	35525.50169222632	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	22	1209	15.0	-6	True	GATAAA	-25
PB.4541.1	chr16	+	1515	9	full-splice_match	DHODH	ENST00000219240.8	2426	9	0	911	0	-7	multi-exon	FALSE	canonical	1	92652	junction_1	35525.50169222632	NA	0	NA	TRUE	NA	NA	NA	C	coding	395	1188	22	1209	15.0	-6	True	AATAAA	-17
PB.8941.7	chr4	-	1586	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	29	2542	29	675	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	254	808	15.0	0	True	AATAAA	-18
PB.8941.6	chr4	-	1730	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	3	2424	3	793	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	280	834	35.0	3	True	GATAAA	-30
PB.8941.5	chr4	-	2616	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	-1	1542	-1	-1542	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	284	838	50.0	-1	True	NA	NA
PB.8941.4	chr4	-	2966	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	120	1071	120	-1071	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	184	555	163	717	50.0	344	False	ATTAAA	-26
PB.8941.3	chr4	-	3983	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	3	171	3	-171	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	184	555	280	834	45.0	3	True	ATTAAA	-18
PB.8941.2	chr4	-	4172	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	-12	-3	-12	3	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	184	555	295	849	25.0	-12	True	NA	NA
PB.8941.1	chr4	-	5676	2	full-splice_match	TIFA	ENST00000361717.3	4157	2	70	-1589	70	1589	multi-exon	FALSE	canonical	1	282008	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	184	555	213	767	30.0	294	False	AATAAA	-32
PB.4213.1	chr16	-	6789	25	incomplete-splice_match	CREBBP	ENST00000382070.7	7598	30	98845	-885	-408	885	5prime_fragment	FALSE	canonical	1	189432	junction_20	91727.66024252285	NA	5	NA	TRUE	NA	NA	NA	B	coding	1881	5646	80	5725	20.0	NA	False	TATAAA	-37
PB.4213.3	chr16	-	1779	1	incomplete-splice_match	CREBBP	ENST00000262367.9	10803	31	152127	1767	8400	718	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	282	849	34	882	25.0	7536	False	AATAAA	-16
PB.4213.4	chr16	-	2152	11	novel_not_in_catalog	CREBBP	novel	10803	31	NA	NA	40	-199	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_10	103167.4002250711	NA	1	NA	TRUE	NA	NA	NA	B	coding	659	1977	175	2151	65.0	11	True	NA	NA
PB.8941.9	chr4	-	5488	1	novel_in_catalog	TIFA	novel	4157	2	NA	NA	48	-2609	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	131	396	1	396	100.0	19	True	NA	NA
PB.8941.8	chr4	-	1704	3	novel_not_in_catalog	TIFA	novel	4157	2	NA	NA	3	675	any annotated donor/acceptor	FALSE	canonical	1	5153	junction_2	374.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	184	555	372	926	15.0	3	True	AATAAA	-18
PB.6654.2	chr2	-	4756	23	full-splice_match	REV1	ENST00000393445.7	4686	23	-72	2	-10	-2	multi-exon	TRUE	canonical	1	56940	junction_15	67046.23247747449	NA	1	NA	TRUE	NA	NA	NA	C	coding	1250	3753	240	3992	25.0	-46	True	AATAAA	-16
PB.10015.11	chr6	+	1127	7	incomplete-splice_match	HSP90AB1	ENST00000371646.9	2572	12	13	2765	13	-2762	3prime_fragment	FALSE	canonical	1	2184110	junction_4	2664877.637697112	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1029	97	1125	65.0	-1	True	NA	NA
PB.11225.2	chr8	+	3494	7	novel_not_in_catalog	OSGIN2	novel	3990	6	NA	NA	71	-559	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121157.50266595131	NA	1	NA	TRUE	NA	NA	NA	C	coding	549	1650	83	1732	75.0	16	True	NA	NA
PB.11225.1	chr8	+	3547	6	full-splice_match	OSGIN2	ENST00000297438.6	4209	6	158	504	158	-489	multi-exon	TRUE	canonical	1	26114	junction_1	112369.34100830174	NA	2	NA	TRUE	NA	NA	NA	C	coding	505	1518	198	1715	20.0	0	True	AATAAA	-40
PB.10015.10	chr6	+	2568	12	full-splice_match	HSP90AB1	ENST00000353801.7	2582	12	12	2	12	-2	multi-exon	FALSE	canonical	1	52939	junction_1	2594364.035129054	NA	41	2	TRUE	NA	NA	NA	C	coding	724	2175	111	2285	5.0	-2	True	AATAAA	-19
PB.6862.3	chr2	+	3122	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	192	-1247	6	1247	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	46	1182	25.0	-39	False	ATTAAA	-17
PB.11225.5	chr8	+	2683	7	novel_not_in_catalog	OSGIN2	novel	3990	6	NA	NA	105	-1341	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	139747.9947119099	NA	4	NA	TRUE	NA	NA	NA	C	coding	505	1518	186	1703	65.0	2	True	ATTAAA	-5
PB.11225.4	chr8	+	1756	7	novel_not_in_catalog	OSGIN2	novel	3990	6	NA	NA	103	-2265	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	121157.50266595131	NA	0	NA	TRUE	NA	NA	NA	C	coding	549	1650	51	1700	10.0	0	True	ATTAAA	-35
PB.6862.2	chr2	+	3019	11	novel_not_in_catalog	HNRNPA3	novel	2067	11	NA	NA	-18	-101	any annotated donor/acceptor	FALSE	canonical	1	811	junction_3	161993.3641401709	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	70	1206	10.0	-63	False	ATTAAA	-18
PB.96.1	chr1	-	6175	12	full-splice_match	MTHFR	ENST00000376583.7	7044	12	-23	892	-11	-19	multi-exon	TRUE	canonical	1	14673	junction_11	35219.9375504536	NA	0	NA	TRUE	NA	NA	NA	C	coding	697	2094	24	2117	95.0	-1	True	NA	NA
PB.96.2	chr1	-	6150	12	full-splice_match	MTHFR	ENST00000376590.8	7094	12	925	19	7	-19	multi-exon	FALSE	canonical	1	20993	junction_11	33705.376941622526	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	122	2092	95.0	-5	True	NA	NA
PB.10272.1	chr6	-	2541	1	intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	121	366	1378	1743	10.0	-1951	False	NA	NA
PB.6862.5	chr2	+	5753	10	full-splice_match	HNRNPA3	ENST00000435711.5	1731	10	-31	-3991	-8	-102	multi-exon	FALSE	canonical	1	811	junction_3	167523.3254032788	NA	3	NA	TRUE	NA	NA	NA	C	coding	378	1137	60	1196	5.0	-53	False	ATTAAA	-17
PB.794.2	chr1	-	3163	23	full-splice_match	THBS3	ENST00000368378.7	3145	23	-21	3	-1	-1	multi-exon	FALSE	canonical	1	76512	junction_22	57171.29170366991	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	43	2913	30.0	-24	True	CATAAA	-16
PB.6862.4	chr2	+	4869	11	full-splice_match	HNRNPA3	ENST00000392524.6	2067	11	178	-2980	-8	-893	multi-exon	FALSE	canonical	1	811	junction_3	185752.50582600493	NA	1	NA	TRUE	NA	NA	NA	C	coding	378	1137	60	1196	60.0	-53	False	NA	NA
PB.8452.4	chr3	-	3683	20	full-splice_match	PLOD2	ENST00000494950.5	2908	20	-57	-718	-57	-19	multi-exon	FALSE	canonical	1	5575	junction_19	185000.3737414657	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2112	318	2429	65.0	-41	True	NA	NA
PB.9337.42	chr5	-	2713	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-1	-10	combination_of_known_junctions	FALSE	canonical	1	222033	junction_1	120393.75475866217	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	369	1766	50.0	0	True	NA	NA
PB.9337.40	chr5	-	3291	9	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	5676	junction_6	178084.88594272782	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1158	370	1527	55.0	-1	True	AATAAA	-20
PB.9337.46	chr5	-	2062	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-7	-96	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_9	166691.35258115022	NA	2	NA	TRUE	NA	NA	NA	C	coding	433	1302	178	1479	50.0	-4	True	ATTAAA	-38
PB.9337.47	chr5	-	1874	10	full-splice_match	MEF2C	ENST00000508569.5	1882	10	-3	11	0	-2	multi-exon	FALSE	canonical	1	217338	junction_9	125159.06670323446	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	373	1770	65.0	-1	True	NA	NA
PB.9337.44	chr5	-	2515	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	5678	junction_9	166751.1047971249	NA	2	NA	TRUE	NA	NA	NA	C	coding	433	1302	188	1489	35.0	-11	True	AATATA	-14
PB.9337.45	chr5	-	2551	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-17	9	no_combination_of_known_junctions	FALSE	canonical	1	5920	junction_9	168901.72281675856	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	188	1585	60.0	-14	True	TATAAA	-17
PB.5887.2	chr19	-	5401	4	novel_not_in_catalog	ZNF91	novel	2405	2	NA	NA	-5	-18	any annotated donor/acceptor	FALSE	canonical	1	2308	junction_1	46516.24674120741	NA	1	NA	TRUE	NA	NA	NA	C	coding	1092	3279	434	3712	55.0	-6	True	AATAAA	-13
PB.5887.1	chr19	-	5408	4	full-splice_match	ZNF91	ENST00000300619.11	5489	4	89	-8	0	8	multi-exon	FALSE	canonical	1	69733	junction_3	21447.39203000889	NA	0	NA	TRUE	NA	NA	NA	C	coding	1191	3576	118	3693	30.0	-1	True	AATAAA	-39
PB.9337.49	chr5	-	2315	3	incomplete-splice_match	MEF2C	ENST00000513252.5	1063	7	-158	71229	-78	1492	3prime_fragment	FALSE	canonical	1	217338	junction_2	208969.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	6222	False	AATAAA	-6
PB.5887.6	chr19	-	2414	1	novel_in_catalog	ZNF91	novel	5489	4	NA	NA	-19	-30952	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	81	246	137	382	85.0	-20	False	AGTAAA	-33
PB.5887.5	chr19	-	3696	4	full-splice_match	ZNF91	ENST00000300619.11	5489	4	84	1709	-5	-2	multi-exon	FALSE	canonical	1	69733	junction_3	21447.39203000889	NA	0	NA	TRUE	NA	NA	NA	C	coding	1191	3573	123	3695	70.0	-6	True	NA	NA
PB.5887.4	chr19	-	3860	4	full-splice_match	ZNF91	ENST00000300619.11	5489	4	84	1545	-5	162	multi-exon	FALSE	canonical	1	69733	junction_3	21447.39203000889	NA	0	NA	TRUE	NA	NA	NA	C	coding	1191	3576	123	3698	90.0	-6	True	NA	NA
PB.560.7	chr1	+	7518	33	novel_in_catalog	AGL	novel	7368	34	NA	NA	24	-2	intron_retention	FALSE	canonical	1	70530	junction_1	40245.46665404873	NA	3	NA	TRUE	NA	NA	NA	C	coding	1260	3783	1369	5151	10.0	-18	True	AATAAA	-16
PB.10604.2	chr7	-	1553	11	full-splice_match	RFC2	ENST00000055077.7	1695	11	15	127	15	110	multi-exon	FALSE	canonical	1	419826	junction_7	128443.35370679949	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	47	1111	5.0	-31	True	NA	NA
PB.10604.1	chr7	-	1685	11	full-splice_match	RFC2	ENST00000055077.7	1695	11	43	-33	6	0	multi-exon	TRUE	canonical	1	419826	junction_7	128443.35370679949	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	19	1083	40.0	-3	True	AATAAA	-21
PB.10016.1	chr6	-	2297	4	novel_not_in_catalog	SLC35B2	novel	1859	3	NA	NA	9	257	any annotated donor/acceptor	FALSE	canonical	1	8702	junction_2	255006.85272535108	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	447	1430	75.0	8082	False	TATAAA	-38
PB.10016.2	chr6	-	2074	4	full-splice_match	SLC35B2	ENST00000619636.4	2063	4	0	-11	0	5	multi-exon	FALSE	non_canonical	0	0	junction_3	275465.2100312407	NA	2	NA	TRUE	NA	NA	NA	C	coding	383	1152	308	1459	20.0	8275	False	ATTAAA	-29
PB.10016.3	chr6	-	2004	4	full-splice_match	SLC35B2	ENST00000393812.3	2043	4	43	-4	43	0	multi-exon	FALSE	canonical	1	278602	junction_3	147444.8500566304	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	102	1400	5.0	16	True	ATTAAA	-18
PB.10016.4	chr6	-	2192	3	novel_in_catalog	SLC35B2	novel	1859	3	NA	NA	43	0	intron_retention	FALSE	canonical	1	278602	junction_2	176448.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	605	1588	5.0	16	True	ATTAAA	-18
PB.10016.6	chr6	-	1932	4	novel_not_in_catalog	SLC35B2	novel	1859	3	NA	NA	25	0	any annotated donor/acceptor	FALSE	canonical	1	732	junction_2	258115.6223417887	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	120	1328	5.0	-2	True	ATTAAA	-18
PB.10016.7	chr6	-	1840	5	novel_not_in_catalog	SLC35B2	novel	1859	3	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	1	3618	junction_1	241584.55060534706	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	607	1236	5.0	8080	False	ATTAAA	-18
PB.10016.8	chr6	-	1906	5	novel_not_in_catalog	SLC35B2	novel	1859	3	NA	NA	26	-1	any annotated donor/acceptor	FALSE	canonical	1	2080	junction_1	242150.15030800106	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	119	1303	5.0	-1	True	ATTAAA	-17
PB.10016.9	chr6	-	1847	3	full-splice_match	SLC35B2	ENST00000393810.5	1898	3	43	8	43	2	multi-exon	FALSE	canonical	1	13043	junction_1	132779.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	418	1245	5.0	16	True	ATTAAA	-16
PB.11348.7	chr8	-	2659	10	full-splice_match	ST3GAL1	ENST00000522652.5	2580	10	-36	-43	2	-29	multi-exon	FALSE	canonical	1	80173	junction_8	48943.78422937236	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	775	1797	95.0	1	True	NA	NA
PB.10175.1	chr6	-	3136	10	novel_not_in_catalog	FRK	novel	13230	8	NA	NA	-39967	-10382	any annotated donor/acceptor	FALSE	canonical	1	2158	junction_9	15085.658962106616	NA	0	NA	TRUE	NA	NA	NA	A	coding	505	1518	736	2253	30.0	-1	True	AATAAA	-26
PB.10175.2	chr6	-	2597	1	intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-1	True	NA	NA
PB.11637.19	chr9	+	4625	7	novel_not_in_catalog	SPIN1	novel	4484	6	NA	NA	-353	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	225313.75856181086	NA	5	NA	TRUE	NA	NA	NA	C	coding	262	789	422	1210	30.0	-212	False	AATAAA	-13
PB.6948.6	chr2	-	3568	11	full-splice_match	ALS2	ENST00000482789.5	2981	11	29	-616	-5	616	multi-exon	FALSE	canonical	1	83709	junction_10	15611.480826622437	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	112	2550	30.0	5	True	AATAAA	-20
PB.11862.11	chr9	+	2903	19	novel_in_catalog	POMT1	novel	2821	18	NA	NA	2	-18	combination_of_known_junctions	FALSE	canonical	1	7075	junction_2	84813.05507133882	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1827	403	2229	50.0	2	True	TTTAAA	-8
PB.1087.6	chr1	+	2672	9	novel_in_catalog	CD55	novel	2892	10	NA	NA	0	1	intron_retention	FALSE	canonical	1	201639	junction_8	484712.18956586433	NA	2	NA	TRUE	NA	NA	NA	C	coding	368	1107	124	1230	35.0	-9624	False	AATAAA	-20
PB.6764.1	chr2	+	1720	11	incomplete-splice_match	KYNU	ENST00000375773.6	1772	12	-32	521	-32	-521	intron_retention	FALSE	canonical	1	14475	junction_10	140396.86171506828	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	132	1055	35.0	-3	True	AATAAA	-9
PB.9071.14	chr4	+	3690	11	novel_in_catalog	CEP44	novel	4534	12	NA	NA	11	446	combination_of_known_junctions	FALSE	canonical	1	6307	junction_10	48019.580910707664	NA	2	1	TRUE	NA	NA	NA	C	coding	399	1200	260	1459	30.0	14	False	AATAAA	-19
PB.6764.3	chr2	+	2330	14	full-splice_match	KYNU	ENST00000264170.8	15316	14	131	12855	-28	805	multi-exon	FALSE	canonical	1	302451	junction_1	65701.82194118008	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	128	1525	20.0	1	True	AATAAA	-14
PB.9071.12	chr4	+	4309	11	novel_in_catalog	CEP44	novel	4534	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	4549	junction_1	41896.98721256697	NA	1	NA	TRUE	NA	NA	NA	C	coding	390	1173	190	1362	20.0	0	True	AATAAA	-17
PB.9071.13	chr4	+	4432	11	novel_in_catalog	CEP44	novel	4534	12	NA	NA	11	-4	intron_retention	FALSE	canonical	1	11460	junction_10	47052.652690470066	NA	3	NA	TRUE	NA	NA	NA	C	coding	363	1092	355	1446	15.0	11	True	AATAAA	-13
PB.9071.10	chr4	+	1955	12	incomplete-splice_match	CEP44	ENST00000396791.7	3824	14	17	14415	-1	1192	3prime_fragment	FALSE	canonical	1	29482	junction_1	35609.40763291271	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	288	1460	30.0	-1	True	AATAAA	-14
PB.9071.11	chr4	+	4485	12	novel_in_catalog	CEP44	novel	4534	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	13850	junction_1	38660.78025703367	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	366	1538	20.0	0	True	AATAAA	-17
PB.11690.1	chr9	+	1762	3	full-splice_match	MSANTD3	ENST00000395067.6	1362	3	109	-509	-12	27	multi-exon	FALSE	canonical	1	82005	junction_1	110599.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	275	828	163	990	25.0	-12	True	NA	NA
PB.8473.37	chr3	+	5528	10	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	128	0	no_combination_of_known_junctions	FALSE	canonical	1	22145	junction_1	338956.2341305299	NA	2	NA	TRUE	NA	NA	NA	C	coding	382	1149	967	2115	25.0	-809	False	AATAAA	-37
PB.3408.4	chr14	-	2862	2	incomplete-splice_match	LINC00648	ENST00000556923.1	276	3	21055	-2646	21055	0	5prime_fragment	FALSE	canonical	1	574	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	NA	False	NA	NA
PB.11364.1	chr8	+	2934	1	genic	PSCA	novel	NA	NA	NA	NA	-38	-8567	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-27	False	NA	NA
PB.3408.5	chr14	-	2521	4	novel_not_in_catalog	LINC00648	novel	2885	3	NA	NA	-106567	-19235	any annotated donor/acceptor	FALSE	canonical	1	614	junction_1	1197.5467515810071	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	NA	False	AATAAA	-17
PB.483.20	chr1	-	2516	11	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	6	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	109130.11141128739	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	532	1383	25.0	-16	True	AATAAA	-26
PB.8151.4	chr3	+	2520	12	full-splice_match	PARP3	ENST00000417220.6	2472	12	-38	-10	-38	5	multi-exon	FALSE	canonical	1	4951	junction_1	66849.44150319624	NA	1	NA	TRUE	NA	NA	NA	C	coding	533	1602	527	2128	25.0	27	True	NA	NA
PB.483.22	chr1	-	5858	5	incomplete-splice_match	AC118549.1	ENST00000370801.7	4328	15	0	63473	0	5209	3prime_fragment	FALSE	canonical	1	44319	junction_4	56787.71417745215	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	477	1991	25.0	-1	True	NA	NA
PB.483.23	chr1	-	6032	5	full-splice_match	AC118549.1	ENST00000463166.5	587	5	-38	-5407	-22	5277	multi-exon	FALSE	canonical	1	81174	junction_4	41831.150936682345	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	583	2097	30.0	103	False	AATAAA	-11
PB.483.24	chr1	-	5287	1	novel_in_catalog	AC118549.1	novel	4328	15	NA	NA	-315	5277	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	254	765	588	1352	30.0	3512	False	AATAAA	-11
PB.483.25	chr1	-	2278	1	novel_in_catalog	AC118549.1	novel	4328	15	NA	NA	6221	2837	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	7122	False	AATAAA	-16
PB.5962.1	chr19	+	2939	6	novel_in_catalog	ZNF383	novel	562	3	NA	NA	8	1010	combination_of_known_junctions	FALSE	canonical	1	1637	junction_1	34559.9244732971	NA	0	NA	TRUE	NA	NA	NA	B	coding	475	1428	245	1672	35.0	-16	True	AGTAAA	-21
PB.5962.2	chr19	+	1531	6	novel_in_catalog	ZNF383	novel	562	3	NA	NA	32	-111	combination_of_known_junctions	FALSE	canonical	1	1637	junction_1	34559.9244732971	NA	0	NA	TRUE	NA	NA	NA	B	coding	437	1311	221	1531	35.0	8	True	AATAAA	-13
PB.1764.1	chr11	+	1543	11	full-splice_match	SLC22A18	ENST00000649076.1	1534	11	-4	-5	-4	0	multi-exon	TRUE	canonical	1	123235	junction_1	50119.48300451632	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	220	1494	0.0	-4	True	AATAAA	-21
PB.1764.2	chr11	+	1739	11	novel_not_in_catalog	SLC22A18	novel	1542	11	NA	NA	27	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	72523.70491563431	NA	2	1	TRUE	NA	NA	NA	C	coding	424	1275	421	1695	5.0	28	True	AATAAA	-16
PB.9342.1	chr5	+	4101	10	novel_not_in_catalog	ADGRV1	novel	19333	90	NA	NA	100	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	5905.375180688468	NA	1	NA	TRUE	NA	NA	NA	A	coding	567	1704	514	2217	40.0	4	True	AATAAA	-19
PB.5748.3	chr19	-	4163	5	full-splice_match	ZNF490	ENST00000311437.10	4237	5	75	-1	75	1	multi-exon	FALSE	canonical	1	36939	junction_4	3962.99741357473	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	49	1638	10.0	-4	True	AATAAA	-14
PB.5748.2	chr19	-	4359	6	full-splice_match	ZNF490	ENST00000414906.5	996	6	-10	-3353	-10	7	multi-exon	FALSE	canonical	1	13311	junction_4	14472.734212995138	NA	2	NA	TRUE	NA	NA	NA	C	coding	490	1473	356	1828	20.0	-1	True	AATAAA	-20
PB.5748.1	chr19	-	6201	5	full-splice_match	ZNF490	ENST00000311437.10	4237	5	-8	-1956	-8	1956	multi-exon	FALSE	canonical	1	36939	junction_4	3962.99741357473	NA	73	1	TRUE	NA	NA	NA	C	coding	529	1590	132	1721	15.0	1	True	NA	NA
PB.1084.4	chr1	-	3361	2	full-splice_match	YOD1	ENST00000315927.8	6265	2	62	2842	62	-2842	multi-exon	FALSE	canonical	1	218296	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	121	1032	35.0	-27	True	ATTAAA	-29
PB.5481.7	chr18	+	2344	8	novel_not_in_catalog	SKA1	novel	2905	7	NA	NA	4	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	50420.33807858872	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	202	969	25.0	4	True	NA	NA
PB.10020.9	chr6	+	4376	4	novel_not_in_catalog	ENPP4	novel	4651	4	NA	NA	164	-108	any annotated donor/acceptor	FALSE	canonical	1	4804	junction_3	77607.56860570294	NA	2	NA	TRUE	NA	NA	NA	C	coding	452	1359	67	1425	35.0	-4	True	ATTAAA	-14
PB.10020.8	chr6	+	3210	4	full-splice_match	ENPP4	ENST00000321037.4	4651	4	143	1298	143	-1298	multi-exon	FALSE	canonical	1	64902	junction_1	51835.371972771216	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	88	1449	45.0	0	True	AATAAA	-29
PB.10020.7	chr6	+	4460	5	novel_not_in_catalog	ENPP4	novel	4651	4	NA	NA	68	-20	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	72733.32922910927	NA	7	NA	TRUE	NA	NA	NA	C	coding	453	1362	163	1524	45.0	6	True	AATAAA	-31
PB.7586.1	chr22	+	3247	5	intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	coding	108	327	1925	2251	35.0	NA	False	AATAAA	-22
PB.10020.5	chr6	+	1991	4	full-splice_match	ENPP4	ENST00000321037.4	4651	4	-4	2664	-4	-2664	multi-exon	FALSE	canonical	1	64902	junction_1	51835.371972771216	NA	3	NA	TRUE	NA	NA	NA	C	coding	453	1362	235	1596	65.0	0	True	AATAAA	-14
PB.10020.4	chr6	+	4136	4	full-splice_match	ENPP4	ENST00000321037.4	4651	4	164	351	164	-351	multi-exon	FALSE	canonical	1	64902	junction_1	51835.371972771216	NA	2	NA	TRUE	NA	NA	NA	C	coding	453	1362	67	1428	0.0	-4	True	ATTAAA	-25
PB.10020.3	chr6	+	4657	4	full-splice_match	ENPP4	ENST00000321037.4	4651	4	-6	0	-6	0	multi-exon	FALSE	canonical	1	64902	junction_1	51835.371972771216	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	237	1598	15.0	-2	True	ATTAAA	-18
PB.10020.2	chr6	+	3661	4	full-splice_match	ENPP4	ENST00000321037.4	4651	4	170	820	170	-820	multi-exon	FALSE	canonical	1	64902	junction_1	51835.371972771216	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	61	1422	30.0	2	True	AATAAA	-16
PB.72.3	chr1	-	3906	2	full-splice_match	MIR34AHG	ENST00000635687.1	4211	2	27	278	27	-278	multi-exon	FALSE	canonical	1	3666	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	133	402	28	429	30.0	4	True	NA	NA
PB.8473.35	chr3	+	2606	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	-8	525	no_combination_of_known_junctions	FALSE	canonical	1	17264	junction_1	353867.2988247148	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	416	1288	80.0	-945	False	NA	NA
PB.8563.28	chr3	+	5072	33	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	494397	junction_3	758647.9657122339	NA	0	NA	TRUE	NA	NA	NA	C	coding	1600	4803	124	4926	10.0	6	True	AATAAA	-15
PB.8563.29	chr3	+	3008	19	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	494397	junction_3	756098.8926852867	NA	0	NA	TRUE	NA	NA	NA	C	coding	963	2889	119	3007	70.0	11	True	NA	NA
PB.490.29	chr1	+	2023	9	full-splice_match	IFI44L	ENST00000370751.9	5874	9	90	3761	24	-415	multi-exon	FALSE	canonical	1	130560	junction_1	126586.90072707957	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	90	1448	95.0	45	True	NA	NA
PB.8563.22	chr3	+	4819	30	novel_not_in_catalog	EIF4G1	novel	5516	33	NA	NA	18	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_29	766297.1169746884	NA	2	NA	TRUE	NA	NA	NA	C	coding	1427	4284	206	4489	25.0	-19	True	ATTAAA	-10
PB.8563.23	chr3	+	4909	28	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	-18	0	no_combination_of_known_junctions	FALSE	canonical	1	3048	junction_1	688988.0094396813	NA	1	NA	TRUE	NA	NA	NA	C	coding	1436	4311	156	4466	15.0	-18	True	ATTAAA	-14
PB.8563.20	chr3	+	3000	18	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	21552	junction_3	793983.6848852055	NA	8	1	TRUE	NA	NA	NA	C	coding	934	2802	198	2999	70.0	-37	True	NA	NA
PB.10161.4	chr6	+	3028	5	novel_not_in_catalog	MFSD4B	novel	5958	4	NA	NA	-7	5159	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	30816.464303801953	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	361	1917	15.0	2	True	NA	NA
PB.10161.3	chr6	+	2456	4	full-splice_match	MFSD4B	ENST00000368847.4	5958	4	-8	3510	-8	-3510	multi-exon	FALSE	canonical	1	53803	junction_1	12135.485679059848	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	362	1918	65.0	1	True	NA	NA
PB.10161.2	chr6	+	2119	4	full-splice_match	MFSD4B	ENST00000368847.4	5958	4	-9	3848	-9	-3848	multi-exon	FALSE	canonical	1	53803	junction_1	12135.485679059848	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	363	1919	35.0	0	True	CATAAA	-26
PB.10161.1	chr6	+	3859	4	full-splice_match	MFSD4B	ENST00000368847.4	5958	4	-11	2110	-11	-2110	multi-exon	FALSE	canonical	1	53803	junction_1	12135.485679059848	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	365	1921	30.0	-2	True	TATAAA	-25
PB.8563.25	chr3	+	2350	15	incomplete-splice_match	EIF4G1	ENST00000346169.6	5516	33	95	11860	-16	-733	3prime_fragment	FALSE	canonical	1	494397	junction_3	666955.1643401526	NA	0	NA	TRUE	NA	NA	NA	C	coding	724	2172	177	2348	60.0	-16	True	NA	NA
PB.9636.1	chr5	-	3714	11	full-splice_match	RNF44	ENST00000274811.8	4155	11	424	17	300	-17	multi-exon	FALSE	canonical	1	82063	junction_10	150941.18138801618	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	102	1400	20.0	-2	True	AATAAA	-16
PB.8305.7	chr3	-	3586	5	novel_not_in_catalog	NAA50	novel	6135	5	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	436003.3430154951	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	333	821	20.0	8374	False	AATAAA	-18
PB.9636.3	chr5	-	3818	11	novel_not_in_catalog	RNF44	novel	4155	11	NA	NA	-347	-7	any annotated donor/acceptor	FALSE	canonical	1	24976	junction_10	155901.2067606919	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	439	1494	5.0	-4	True	AATAAA	-26
PB.9636.2	chr5	-	3645	11	novel_in_catalog	RNF44	novel	4155	11	NA	NA	305	-17	combination_of_known_junctions	FALSE	canonical	1	82063	junction_10	146554.07153269404	NA	2	NA	TRUE	NA	NA	NA	C	coding	351	1056	276	1331	20.0	3	True	AATAAA	-16
PB.9636.5	chr5	-	3626	11	novel_not_in_catalog	RNF44	novel	4155	11	NA	NA	248	-16	any annotated donor/acceptor	FALSE	canonical	1	12655	junction_7	174115.2827360367	NA	3	NA	TRUE	NA	NA	NA	C	coding	385	1158	154	1311	15.0	6436	False	AATAAA	-17
PB.9636.7	chr5	-	3800	11	novel_in_catalog	RNF44	novel	4155	11	NA	NA	-57	-17	combination_of_known_junctions	FALSE	canonical	1	76589	junction_10	147389.80403165612	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	431	1486	20.0	5547	False	AATAAA	-16
PB.3863.8	chr15	-	7140	38	novel_in_catalog	TRPM7	novel	830	6	NA	NA	3	-3	no_combination_of_known_junctions	FALSE	canonical	1	12901	junction_28	63819.98882821589	NA	1	NA	TRUE	NA	NA	NA	C	coding	1417	4254	1505	5758	30.0	2	True	AATAAA	-13
PB.8723.5	chr4	-	3317	23	incomplete-splice_match	SEL1L3	ENST00000399878.7	4520	24	98	10074	98	33	3prime_fragment	FALSE	canonical	1	130858	junction_22	84722.1622145948	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3273	26	3298	75.0	-15	True	TATAAA	-19
PB.3863.4	chr15	-	7341	40	novel_not_in_catalog	TRPM7	novel	830	6	NA	NA	-4	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_36	73883.10848168546	NA	14	2	TRUE	NA	NA	NA	C	coding	1806	5421	537	5957	30.0	-5	True	AATAAA	-15
PB.8723.1	chr4	-	4355	24	full-splice_match	SEL1L3	ENST00000399878.7	4520	24	99	66	99	-59	multi-exon	TRUE	canonical	1	130858	junction_23	90458.17459698029	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	25	3423	30.0	-14	True	AATAAA	-25
PB.3863.2	chr15	-	7247	39	full-splice_match	TRPM7	ENST00000646667.1	10382	39	1	3134	1	1	multi-exon	TRUE	canonical	1	139826	junction_18	53203.1851067859	NA	0	NA	TRUE	NA	NA	NA	C	coding	1865	5598	264	5861	25.0	0	True	AATAAA	-17
PB.8723.3	chr4	-	3516	24	full-splice_match	SEL1L3	ENST00000399878.7	4520	24	121	883	121	-44	multi-exon	FALSE	canonical	1	130858	junction_23	90458.17459698029	NA	0	NA	TRUE	NA	NA	NA	C	coding	1132	3399	3	3401	25.0	8	True	GATAAA	-28
PB.7872.2	chr22	+	2178	8	incomplete-splice_match	TBC1D22A	ENST00000337137.8	3787	13	7	262501	7	119417	3prime_fragment	TRUE	canonical	1	235499	junction_4	47990.57021915018	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	160	1197	40.0	-32	True	AATAAA	-19
PB.9767.6	chr6	-	1799	9	novel_not_in_catalog	TPMT	novel	3181	9	NA	NA	-3	-1399	any annotated donor/acceptor	FALSE	canonical	1	7967	junction_7	93465.35439794991	NA	2	1	TRUE	NA	NA	NA	C	coding	222	669	173	841	15.0	-1	True	AATAAA	-21
PB.3220.10	chr13	+	3893	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-34	4963	-34	-4963	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	60	1382	40.0	12	True	ATTAAA	-15
PB.9767.4	chr6	-	2162	10	novel_not_in_catalog	TPMT	novel	3181	9	NA	NA	0	-1398	any annotated donor/acceptor	FALSE	canonical	1	3337	junction_8	68022.61972478143	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	466	1203	15.0	2	True	AATAAA	-22
PB.9767.5	chr6	-	1753	9	full-splice_match	TPMT	ENST00000309983.4	3181	9	-20	1448	-20	-1448	multi-exon	FALSE	canonical	1	76134	junction_3	82246.895920815	NA	2	NA	TRUE	NA	NA	NA	C	coding	245	738	107	844	45.0	-2	True	ATTAAA	-13
PB.9767.2	chr6	-	1722	10	novel_not_in_catalog	TPMT	novel	3181	9	NA	NA	-3	-5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	92460.52478640697	NA	1	1	TRUE	NA	NA	NA	C	coding	245	738	90	827	30.0	-1	True	ATTAAA	-19
PB.5098.2	chr17	-	1974	7	novel_in_catalog	FAM117A	novel	2365	8	NA	NA	26	-2	no_combination_of_known_junctions	FALSE	canonical	1	2940	junction_6	135390.06248572638	NA	0	NA	TRUE	NA	NA	NA	B	coding	181	546	508	1053	30.0	4040	False	AATAAA	-18
PB.5098.1	chr17	-	2155	8	novel_in_catalog	FAM117A	novel	2365	8	NA	NA	21	4	combination_of_known_junctions	FALSE	canonical	1	14147	junction_7	121542.79190575184	NA	0	NA	TRUE	NA	NA	NA	B	coding	181	546	683	1228	30.0	4035	False	AATAAA	-24
PB.9767.1	chr6	-	3196	9	full-splice_match	TPMT	ENST00000309983.4	3181	9	-20	5	-20	-5	multi-exon	FALSE	canonical	1	76134	junction_3	82246.895920815	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	107	844	30.0	-2	True	ATTAAA	-19
PB.1116.13	chr1	+	3258	7	full-splice_match	VASH2	ENST00000366967.6	1206	7	-73	-1979	0	-7	multi-exon	FALSE	canonical	1	5296	junction_1	22008.28098693762	NA	1	NA	TRUE	NA	NA	NA	C	coding	251	756	184	939	80.0	0	True	NA	NA
PB.3220.12	chr13	+	1569	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-25	7278	-25	-7278	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	3	NA	TRUE	NA	NA	NA	C	coding	440	1323	51	1373	60.0	21	True	AATAAA	-23
PB.9767.8	chr6	-	3419	8	novel_in_catalog	TPMT	novel	3181	9	NA	NA	-15	-1403	intron_retention	FALSE	canonical	1	76134	junction_2	86607.08428416282	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	102	725	15.0	3	True	AATAAA	-17
PB.9767.9	chr6	-	1224	9	full-splice_match	TPMT	ENST00000309983.4	3181	9	-50	2007	-50	-2007	multi-exon	FALSE	canonical	1	76134	junction_3	82246.895920815	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	137	874	35.0	1032	False	ATTAAA	-45
PB.9064.6	chr4	+	4323	13	full-splice_match	CLCN3	ENST00000513761.5	6692	13	226	2143	195	985	multi-exon	FALSE	canonical	1	228621	junction_5	82839.93200087576	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	334	2790	80.0	50	False	AATAAA	-26
PB.9064.7	chr4	+	4592	13	incomplete-splice_match	CLCN3	ENST00000347613.8	3635	14	0	1082	0	-815	3prime_fragment	FALSE	canonical	1	74822	junction_12	113907.72419143586	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	555	3026	80.0	-171	False	NA	NA
PB.1756.8	chr11	-	2653	12	novel_not_in_catalog	CHID1	novel	3255	13	NA	NA	1	1454	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	397883.703669762	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	90	1067	15.0	-11	True	NA	NA
PB.3220.13	chr13	+	8840	9	full-splice_match	GPR180	ENST00000376958.4	8822	9	-8	-10	-8	10	multi-exon	FALSE	canonical	1	100630	junction_1	32240.177548508862	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	34	1356	35.0	38	True	NA	NA
PB.5918.2	chr19	-	5300	4	novel_not_in_catalog	ZNF599	novel	3099	4	NA	NA	-14	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	25865.628548756016	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-37	False	AATAAA	-15
PB.9064.3	chr4	+	4631	14	full-splice_match	CLCN3	ENST00000347613.8	3635	14	-11	-985	-6	985	multi-exon	FALSE	canonical	1	50478	junction_13	133132.94438467344	NA	58	NA	TRUE	NA	NA	NA	C	coding	866	2601	566	3166	80.0	0	True	AATAAA	-26
PB.5918.1	chr19	-	3460	4	full-splice_match	ZNF599	ENST00000587354.6	3476	4	15	1	1	-1	multi-exon	FALSE	canonical	1	8820	junction_1	20294.728549278232	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	AATAAA	-16
PB.1756.2	chr11	-	2769	13	full-splice_match	CHID1	ENST00000323578.12	3374	13	611	-6	-15	5	multi-exon	FALSE	canonical	1	400799	junction_12	224705.90620079578	NA	1	NA	TRUE	NA	NA	NA	C	coding	393	1182	120	1301	10.0	4434	False	NA	NA
PB.1756.3	chr11	-	2638	12	full-splice_match	CHID1	ENST00000429789.6	1289	12	11	-1360	-3	-3	multi-exon	FALSE	canonical	1	108308	junction_5	317100.59528713365	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	94	1182	30.0	-15	True	NA	NA
PB.1756.1	chr11	-	2832	14	full-splice_match	CHID1	ENST00000436108.6	1477	14	22	-1377	1	5	multi-exon	FALSE	canonical	1	95482	junction_13	323843.4776254668	NA	2	NA	TRUE	NA	NA	NA	C	coding	393	1182	183	1364	10.0	0	True	NA	NA
PB.1756.6	chr11	-	1480	14	full-splice_match	CHID1	ENST00000436108.6	1477	14	0	-3	0	-1	multi-exon	FALSE	canonical	1	95482	junction_13	323843.4776254668	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	205	1386	10.0	-22	True	AATACA	-22
PB.1756.7	chr11	-	2782	13	novel_not_in_catalog	CHID1	novel	3255	13	NA	NA	-5	1459	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	438307.5026231584	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	214	1191	20.0	-31	True	NA	NA
PB.1756.4	chr11	-	1387	13	full-splice_match	CHID1	ENST00000323578.12	3374	13	620	1367	-6	0	multi-exon	FALSE	canonical	1	400799	junction_12	224705.90620079578	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	111	1292	10.0	-32	True	AATACA	-23
PB.1756.5	chr11	-	1275	12	full-splice_match	CHID1	ENST00000429789.6	1289	12	13	1	-1	0	multi-exon	FALSE	canonical	1	108308	junction_5	317100.59528713365	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	92	1180	10.0	-13	True	AATACA	-23
PB.11348.6	chr8	-	2772	8	novel_in_catalog	ST3GAL1	novel	6764	10	NA	NA	10	-29	intron_retention	FALSE	canonical	1	8642	junction_1	70724.19965598475	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	1008	1910	95.0	26	True	NA	NA
PB.9874.39	chr6	-	3518	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	9	-13	combination_of_known_junctions	FALSE	canonical	1	97477	junction_20	656987.2042974349	NA	3	NA	TRUE	NA	NA	NA	C	coding	1094	3285	145	3429	10.0	11	True	AATAAA	-17
PB.6948.7	chr2	-	2729	5	novel_not_in_catalog	ALS2	novel	6644	34	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	136	junction_1	52456.93988584828	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	530	1381	30.0	-19	True	NA	NA
PB.9862.2	chr6	-	2936	18	novel_in_catalog	CCHCR1	novel	2958	18	NA	NA	1	-1	intron_retention	FALSE	canonical	1	9122	junction_17	72136.5016307451	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2595	190	2784	25.0	0	True	AATAAA	-16
PB.195.3	chr1	-	2407	11	novel_not_in_catalog	UBXN11	novel	2254	11	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_10	147844.49021796518	NA	3	1	TRUE	NA	NA	NA	C	coding	249	750	76	825	15.0	-1	True	AATAAA	-13
PB.4614.2	chr16	+	6656	7	full-splice_match	ZNF778	ENST00000433976.6	3608	7	30	-3078	23	3078	multi-exon	FALSE	canonical	1	21903	junction_4	20626.611304736092	NA	1	NA	TRUE	NA	NA	NA	C	coding	757	2274	310	2583	15.0	23	True	GATAAA	-23
PB.4614.1	chr16	+	6584	6	novel_in_catalog	ZNF778	novel	3608	7	NA	NA	2	3077	intron_retention	FALSE	canonical	1	8630	junction_2	26662.91532897331	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	449	2512	15.0	2	True	GATAAA	-22
PB.12024.1	chrX	-	1748	9	full-splice_match	SRPX	ENST00000538295.5	1780	9	28	4	3	-1	multi-exon	FALSE	canonical	1	16872	junction_1	148272.46618930763	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	105	1244	30.0	-37	True	AATAAA	-20
PB.1187.14	chr1	-	2912	20	incomplete-splice_match	NUP133	ENST00000261396.5	5207	26	10	20365	-5	-11853	3prime_fragment	FALSE	canonical	1	234689	junction_14	77720.14323900473	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2829	83	2911	60.0	-5	True	NA	NA
PB.12024.3	chrX	-	1819	9	full-splice_match	SRPX	ENST00000544439.5	1842	9	17	6	-8	-3	multi-exon	FALSE	canonical	1	8766	junction_8	134516.64747996806	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	116	1450	40.0	-48	True	AATAAA	-18
PB.12024.2	chrX	-	1847	10	full-splice_match	SRPX	ENST00000378533.3	1874	10	24	3	24	-3	multi-exon	FALSE	canonical	1	116324	junction_9	112222.48096405815	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1395	84	1478	40.0	-16	True	AATAAA	-18
PB.11731.1	chr9	+	2151	1	incomplete-splice_match	FAM225A	ENST00000453010.1	5625	3	4615	8	4615	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-8133	False	AATAAA	-7
PB.1193.4	chr1	-	2881	19	novel_in_catalog	TTC13	novel	3253	23	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	8405	junction_15	54651.254473758934	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	28	2220	20.0	-11	True	AATAAA	-40
PB.1116.11	chr1	+	3543	9	full-splice_match	VASH2	ENST00000366968.8	4224	9	0	681	0	-6	multi-exon	FALSE	canonical	1	9094	junction_2	21438.992815370315	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	393	1223	85.0	0	True	NA	NA
PB.9644.3	chr5	-	1223	8	full-splice_match	LMAN2	ENST00000303127.11	1800	8	186	391	1	1	multi-exon	FALSE	canonical	1	1551074	junction_1	429840.28754610044	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	20	1090	15.0	-6	True	AATAAA	-19
PB.9644.1	chr5	-	1553	9	novel_not_in_catalog	LMAN2	novel	1800	8	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	855506.8101154189	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	173	1030	15.0	-5	True	AATAAA	-18
PB.9862.3	chr6	-	2796	18	novel_in_catalog	CCHCR1	novel	2958	18	NA	NA	3	-1	intron_retention	FALSE	canonical	1	9122	junction_17	73818.87992117334	NA	2	NA	TRUE	NA	NA	NA	C	coding	814	2445	200	2644	25.0	-10	True	AATAAA	-16
PB.8130.19	chr3	+	2613	14	full-splice_match	SEMA3B	ENST00000441915.5	2710	14	96	1	96	-1	multi-exon	FALSE	canonical	1	109432	junction_6	65723.69389223521	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1908	243	2150	10.0	-8462	False	AATAAA	-44
PB.5314.8	chr17	-	2428	11	novel_not_in_catalog	TEPSIN	novel	2552	11	NA	NA	-36	0	intron_retention	FALSE	non_canonical	0	0	junction_9	88288.49953397101	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	95	919	15.0	-37	False	AATAAA	-17
PB.5314.9	chr17	-	2254	12	full-splice_match	TEPSIN	ENST00000300714.7	2287	12	31	2	-3	0	multi-exon	FALSE	canonical	1	30087	junction_5	70480.59171827858	NA	1	NA	TRUE	NA	NA	NA	C	coding	525	1578	28	1605	15.0	-6	True	AATAAA	-17
PB.8130.13	chr3	+	2529	15	novel_not_in_catalog	SEMA3B	novel	934	7	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	86245.56318916543	NA	1	1	TRUE	NA	NA	NA	C	coding	262	789	71	859	30.0	0	True	AATAAA	-34
PB.5314.5	chr17	-	3538	14	novel_in_catalog	TEPSIN	novel	2552	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	16904	junction_13	72149.48138610578	NA	1	NA	TRUE	NA	NA	NA	C	coding	441	1326	1564	2889	15.0	-5	True	AATAAA	-17
PB.5314.6	chr17	-	2555	12	novel_in_catalog	TEPSIN	novel	2552	11	NA	NA	1	0	intron_retention	TRUE	canonical	1	61272	junction_11	59544.11268661549	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	24	1046	15.0	-2	True	AATAAA	-17
PB.5314.7	chr17	-	2458	13	full-splice_match	TEPSIN	ENST00000637944.1	1782	13	-27	-649	-3	0	multi-exon	FALSE	canonical	1	61272	junction_12	57339.865570464055	NA	0	NA	TRUE	NA	NA	NA	C	coding	593	1782	28	1809	15.0	-6	True	AATAAA	-17
PB.8237.9	chr3	-	6690	28	novel_not_in_catalog	ROBO1	novel	7492	28	NA	NA	442	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	85095.1307391097	NA	14	1	TRUE	NA	NA	NA	B	coding	834	2505	2519	5023	25.0	1940	False	ATTAAA	-10
PB.5314.2	chr17	-	4085	11	novel_in_catalog	TEPSIN	novel	2552	11	NA	NA	-3	0	intron_retention	FALSE	canonical	1	122400	junction_5	51478.04905209598	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	1575	2576	15.0	-6	True	AATAAA	-17
PB.5314.3	chr17	-	3984	12	incomplete-splice_match	TEPSIN	ENST00000637944.1	1782	13	-27	-649	-3	0	intron_retention	FALSE	canonical	1	122400	junction_6	49985.92588894605	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	1575	3335	15.0	-6	True	AATAAA	-17
PB.10436.31	chr7	-	3855	10	novel_in_catalog	IGF2BP3	novel	4250	15	NA	NA	-25	-713	intron_retention	FALSE	canonical	1	18878	junction_5	39348.1616964362	NA	23	1	TRUE	NA	NA	NA	C	coding	370	1113	276	1388	65.0	21	True	NA	NA
PB.628.3	chr1	-	2486	11	full-splice_match	AP4B1	ENST00000256658.8	2742	11	-52	308	-52	0	multi-exon	FALSE	canonical	1	55255	junction_10	57303.146098621844	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	258	2477	25.0	-56	False	AATAAA	-17
PB.628.1	chr1	-	2650	11	novel_not_in_catalog	AP4B1	novel	2144	7	NA	NA	-8	-3	any annotated donor/acceptor	FALSE	canonical	1	1147	junction_10	70391.83105559906	NA	0	NA	TRUE	NA	NA	NA	C	coding	739	2220	117	2336	35.0	-1	True	ATTAAA	-17
PB.628.6	chr1	-	2232	11	novel_not_in_catalog	AP4B1	novel	2144	7	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	1147	junction_10	87614.60271347465	NA	5	1	TRUE	NA	NA	NA	C	coding	631	1896	329	2224	20.0	22	False	AATAAA	-16
PB.9874.37	chr6	-	3769	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	-7	-13	combination_of_known_junctions	FALSE	canonical	1	97477	junction_21	585415.5721417704	NA	4	1	TRUE	NA	NA	NA	C	coding	1144	3435	246	3680	10.0	5	True	AATAAA	-17
PB.628.5	chr1	-	2117	8	novel_in_catalog	AP4B1	novel	2144	7	NA	NA	-40	0	no_combination_of_known_junctions	FALSE	canonical	1	4466	junction_6	79944.14693792569	NA	0	NA	TRUE	NA	NA	NA	C	coding	646	1941	168	2108	25.0	-86	True	AATAAA	-17
PB.8671.12	chr4	-	3019	19	novel_not_in_catalog	NOP14	novel	703	4	NA	NA	-20	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	152871.87481070182	NA	1	1	TRUE	NA	NA	NA	C	coding	857	2574	87	2660	20.0	0	True	AATAGA	-17
PB.628.8	chr1	-	4833	8	novel_not_in_catalog	AP4B1	novel	2144	7	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	2999	junction_6	78619.23817037276	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	3225	4826	20.0	-74	True	AATAAA	-15
PB.8016.1	chr3	-	2743	15	full-splice_match	PLCD1	ENST00000463876.5	2963	15	219	1	8	-1	multi-exon	TRUE	canonical	1	35291	junction_14	44847.52417710844	NA	0	NA	TRUE	NA	NA	NA	A	coding	777	2334	136	2469	15.0	5073	False	TATAAA	-15
PB.9862.4	chr6	-	2671	17	novel_in_catalog	CCHCR1	novel	2958	18	NA	NA	0	-1	intron_retention	FALSE	canonical	1	34438	junction_16	58679.90055293502	NA	0	NA	TRUE	NA	NA	NA	C	coding	814	2445	75	2519	25.0	-1	True	AATAAA	-16
PB.1875.1	chr11	+	2247	10	novel_in_catalog	EIF3M	novel	1697	6	NA	NA	-1	89	intron_retention	FALSE	canonical	1	2677216	junction_1	478131.70825979754	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	92	712	40.0	-1	True	AGTAAA	-13
PB.1875.2	chr11	+	2435	11	full-splice_match	EIF3M	ENST00000531120.5	5051	11	-15	2631	12	808	multi-exon	FALSE	canonical	1	2677216	junction_1	482246.7183165584	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	79	1203	35.0	-27	True	NA	NA
PB.1875.3	chr11	+	2684	9	novel_in_catalog	EIF3M	novel	1697	6	NA	NA	-9	89	intron_retention	FALSE	canonical	1	2677216	junction_1	458196.63143252087	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	73	693	40.0	-21	True	AGTAAA	-13
PB.1875.4	chr11	+	3179	9	novel_in_catalog	EIF3M	novel	1697	6	NA	NA	-8	89	intron_retention	FALSE	canonical	1	2677216	junction_1	503410.4471318453	NA	4	NA	TRUE	NA	NA	NA	C	coding	206	621	72	692	40.0	-20	True	AGTAAA	-13
PB.1875.5	chr11	+	1241	11	full-splice_match	EIF3M	ENST00000531120.5	5051	11	14	3796	0	89	multi-exon	FALSE	canonical	1	2677216	junction_1	482246.7183165584	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	50	1174	40.0	2	True	AGTAAA	-13
PB.1875.6	chr11	+	2064	9	novel_in_catalog	EIF3M	novel	1697	6	NA	NA	8	89	intron_retention	FALSE	canonical	1	28291	junction_3	1196865.918802409	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	33	404	40.0	19	True	AGTAAA	-13
PB.9150.1	chr5	+	5073	30	novel_not_in_catalog	TRIO	novel	605	4	NA	NA	1001	102	any annotated donor/acceptor	FALSE	canonical	1	2670	junction_1	113747.21316192602	NA	1	NA	TRUE	NA	NA	NA	B	coding	1518	4557	145	4701	35.0	2	True	AATAAA	-14
PB.401.13	chr1	-	4274	25	novel_not_in_catalog	EPS15	novel	4736	23	NA	NA	-53	-964	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	164069.66009378436	NA	5	1	TRUE	NA	NA	NA	C	coding	658	1977	825	2801	15.0	-46	False	AATAAA	-30
PB.10018.6	chr6	-	3367	22	full-splice_match	AARS2	ENST00000244571.4	3854	22	-20	507	-20	411	multi-exon	FALSE	canonical	1	103995	junction_17	33573.22795508741	NA	0	NA	TRUE	NA	NA	NA	C	coding	985	2958	24	2981	65.0	-11	True	NA	NA
PB.9874.36	chr6	-	2555	18	novel_not_in_catalog	BAG6	novel	488	2	NA	NA	-15	-12	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	632092.2122027039	NA	3	1	TRUE	NA	NA	NA	C	coding	765	2298	168	2465	10.0	8048	False	AATAAA	-18
PB.10018.2	chr6	-	3960	22	full-splice_match	AARS2	ENST00000244571.4	3854	22	-13	-93	-13	93	multi-exon	FALSE	canonical	1	103995	junction_17	33573.22795508741	NA	3	NA	TRUE	NA	NA	NA	C	coding	985	2958	17	2974	10.0	-4	True	NA	NA
PB.10018.3	chr6	-	3845	22	full-splice_match	AARS2	ENST00000244571.4	3854	22	-21	30	-21	-30	multi-exon	FALSE	canonical	1	103995	junction_17	33573.22795508741	NA	3	NA	TRUE	NA	NA	NA	C	coding	985	2958	25	2982	10.0	-12	True	NA	NA
PB.10018.1	chr6	-	4079	22	full-splice_match	AARS2	ENST00000244571.4	3854	22	-20	-205	-20	205	multi-exon	TRUE	canonical	1	103995	junction_17	33573.22795508741	NA	2	NA	TRUE	NA	NA	NA	C	coding	985	2958	24	2981	80.0	-11	True	NA	NA
PB.1272.9	chr10	-	1817	15	incomplete-splice_match	PITRM1	ENST00000224949.8	3450	27	25	13448	25	-2	3prime_fragment	FALSE	canonical	1	430757	junction_14	88262.67426903883	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	11	1801	30.0	-1	True	ATTAAA	-16
PB.161.3	chr1	-	3354	1	incomplete-splice_match	E2F2	ENST00000361729.2	5191	7	21428	9	9604	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	NA	False	ATTAAA	-12
PB.10871.11	chr7	-	2896	12	full-splice_match	CREB3L2	ENST00000330387.10	7412	12	-57	4573	-47	-711	multi-exon	FALSE	canonical	1	111277	junction_10	55870.852167896475	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	410	1972	40.0	-29	True	NA	NA
PB.10871.10	chr7	-	3343	12	full-splice_match	CREB3L2	ENST00000330387.10	7412	12	-52	4121	-42	-259	multi-exon	FALSE	canonical	1	111277	junction_10	55870.852167896475	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	405	1967	20.0	-24	True	TATAAA	-17
PB.10871.12	chr7	-	2390	10	full-splice_match	CREB3L2	ENST00000456390.5	2360	10	-30	0	-30	0	multi-exon	FALSE	canonical	1	111277	junction_8	60876.96307905311	NA	2	NA	TRUE	NA	NA	NA	C	coding	460	1383	393	1775	95.0	-12	True	NA	NA
PB.10812.4	chr7	-	2604	5	novel_in_catalog	NDUFA5	novel	5608	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	11956	junction_2	190856.26630055273	NA	11	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-24
PB.10812.5	chr7	-	1675	6	full-splice_match	NDUFA5	ENST00000467117.5	687	6	-17	-971	1	0	multi-exon	FALSE	canonical	1	16766	junction_4	202150.38628268806	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-4	True	AATAAA	-24
PB.10812.6	chr7	-	5733	4	novel_in_catalog	NDUFA5	novel	5608	5	NA	NA	-6	274	intron_retention	FALSE	canonical	1	387220	junction_3	59927.34358092862	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-11	True	AATAGA	-19
PB.2861.1	chr12	-	5965	2	novel_in_catalog	KCCAT198	novel	549	3	NA	NA	21	1958	intron_retention	FALSE	canonical	1	6077	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	A	coding	344	1035	3636	4670	10.0	-7	True	NA	NA
PB.10812.1	chr7	-	5499	5	full-splice_match	NDUFA5	ENST00000355749.6	1901	5	431	-4029	-2	-3	multi-exon	FALSE	canonical	1	150056	junction_2	134298.6008813476	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	30	380	30.0	-7	True	TATAAA	-15
PB.10812.2	chr7	-	1462	5	full-splice_match	NDUFA5	ENST00000355749.6	1901	5	438	1	1	0	multi-exon	FALSE	canonical	1	150056	junction_2	134298.6008813476	NA	1	NA	TRUE	NA	NA	NA	C	coding	116	351	23	373	25.0	0	True	AATAAA	-24
PB.10812.3	chr7	-	6260	4	novel_in_catalog	NDUFA5	novel	5608	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	387220	junction_3	59927.34358092862	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-5	True	AATAAA	-24
PB.11935.7	chrM	+	1851	1	full-splice_match	MT-ND5	ENST00000361567.2	1812	1	0	-39	0	39	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-2	True	AATATA	-7
PB.10812.8	chr7	-	3179	1	novel_in_catalog	NDUFA5	novel	1901	5	NA	NA	24	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	111	336	1639	1974	95.0	0	True	NA	NA
PB.10812.9	chr7	-	2795	2	full-splice_match	NDUFA5	ENST00000490618.1	2802	2	0	7	0	-7	multi-exon	FALSE	canonical	1	387220	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	111	336	1255	1590	95.0	-5	True	NA	NA
PB.8237.6	chr3	-	7317	28	novel_not_in_catalog	ROBO1	novel	7492	28	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	81319.01138307688	NA	2	1	TRUE	NA	NA	NA	B	coding	779	2340	3311	5650	25.0	-1	True	ATTAAA	-10
PB.1861.3	chr11	+	2135	8	full-splice_match	GAS2	ENST00000278187.7	2170	8	37	-2	37	2	multi-exon	FALSE	canonical	1	3331	junction_1	14903.807756162621	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	212	1153	30.0	-7	True	ATTAAA	-20
PB.1861.2	chr11	+	2060	8	novel_in_catalog	GAS2	novel	736	6	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	2968	junction_1	15021.989628812931	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	143	1084	35.0	-2	True	ATTAAA	-14
PB.1861.1	chr11	+	2018	8	full-splice_match	GAS2	ENST00000454584.6	2286	8	212	56	212	-2	multi-exon	FALSE	canonical	1	11675	junction_1	12236.195110225653	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	94	1035	30.0	1	True	ATTAAA	-21
PB.7699.7	chr22	-	2713	16	novel_not_in_catalog	SF3A1	novel	5143	16	NA	NA	-3	-2185	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	409421.2480654233	NA	0	NA	TRUE	NA	NA	NA	C	coding	728	2187	106	2292	30.0	-7	True	AATAAA	-27
PB.11795.1	chr9	+	3036	1	full-splice_match	ZBTB34	ENST00000373452.2	6528	1	3492	0	3492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-44
PB.217.2	chr1	+	2712	6	full-splice_match	THEMIS2	ENST00000373921.7	2687	6	-24	-1	0	1	multi-exon	FALSE	canonical	1	184834	junction_4	105323.37858500364	NA	2	NA	TRUE	NA	NA	NA	C	coding	643	1932	29	1960	40.0	0	True	AATAAA	-21
PB.8599.21	chr3	+	4300	6	incomplete-splice_match	CCDC50	ENST00000392455.8	8957	12	51080	3085	19054	-3085	5prime_fragment	FALSE	canonical	1	747493	junction_5	126859.21851816682	NA	0	NA	TRUE	NA	NA	NA	C	coding	156	471	5	475	35.0	1	True	AATAAA	-19
PB.10388.2	chr7	+	2019	4	full-splice_match	AIMP2	ENST00000223029.7	1225	4	28	-822	-17	822	multi-exon	FALSE	canonical	1	516125	junction_1	154099.80448253514	NA	1	NA	TRUE	NA	NA	NA	C	coding	320	963	92	1054	35.0	-2	True	AATAAA	-34
PB.2842.1	chr12	+	2680	1	antisense	novelGene_PAH_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	268	807	1838	2644	70.0	NA	False	NA	NA
PB.217.3	chr1	+	2832	8	novel_not_in_catalog	THEMIS2	novel	2337	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	166158.1365935623	NA	10	3	TRUE	NA	NA	NA	C	coding	611	1836	29	1864	40.0	0	True	AATAAA	-20
PB.10388.3	chr7	+	1869	5	novel_in_catalog	AIMP2	novel	1225	4	NA	NA	-16	12716	no_combination_of_known_junctions	FALSE	canonical	1	1177	junction_3	364305.65866624966	NA	0	NA	TRUE	NA	NA	NA	C	coding	219	660	91	750	20.0	-1	True	AATACA	-17
PB.217.4	chr1	+	2304	5	novel_in_catalog	THEMIS2	novel	2337	7	NA	NA	0	4	intron_retention	FALSE	canonical	1	6937	junction_2	165191.88247459376	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	29	1549	40.0	0	True	AATAAA	-24
PB.12344.23	chrX	-	5228	28	novel_not_in_catalog	FLNA	novel	8225	47	NA	NA	2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_27	1730150.1978835019	NA	14	3	TRUE	NA	NA	NA	C	coding	1332	3999	910	4908	5.0	-4	True	AATAAA	-18
PB.981.2	chr1	+	5668	22	full-splice_match	SMG7	ENST00000515829.6	5629	22	-37	-2	-10	-1	multi-exon	FALSE	canonical	1	129392	junction_1	99709.78912677137	NA	3	NA	TRUE	NA	NA	NA	C	coding	1091	3276	132	3407	15.0	-17	True	ATTAAA	-20
PB.12344.27	chrX	-	7342	43	novel_not_in_catalog	FLNA	novel	8225	47	NA	NA	-17	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	1513865.9734488588	NA	1	NA	TRUE	NA	NA	NA	C	coding	2315	6948	76	7023	5.0	3964	False	AATAAA	-17
PB.217.6	chr1	+	1640	5	full-splice_match	THEMIS2	ENST00000373925.5	1650	5	0	10	0	2	multi-exon	FALSE	canonical	1	15334	junction_3	162750.20914425887	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	29	811	35.0	0	True	AATAAA	-22
PB.2530.5	chr12	+	3835	27	novel_not_in_catalog	DDX11	novel	3079	27	NA	NA	4	5	any annotated donor/acceptor	FALSE	canonical	1	2904	junction_24	110013.74902294186	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	1121	2875	20.0	1	True	AATAAA	-21
PB.2530.4	chr12	+	3896	25	novel_in_catalog	DDX11	novel	3079	27	NA	NA	3	0	intron_retention	FALSE	canonical	1	2904	junction_23	107319.11483009414	NA	1	NA	TRUE	NA	NA	NA	C	coding	595	1788	1154	2941	15.0	0	True	AATAAA	-16
PB.2530.7	chr12	+	4715	25	novel_not_in_catalog	DDX11	novel	3079	27	NA	NA	6	2	intron_retention	FALSE	non_canonical	0	0	junction_1	110904.90221067496	NA	3	NA	TRUE	NA	NA	NA	C	coding	390	1173	1685	2857	20.0	-3994	False	AATAAA	-18
PB.2530.6	chr12	+	4005	27	novel_not_in_catalog	DDX11	novel	3079	27	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	108220.15234223398	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	330	3050	15.0	-4000	False	AATAAA	-16
PB.2530.1	chr12	+	3826	27	novel_in_catalog	DDX11	novel	3079	27	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	2904	junction_24	108030.98059868708	NA	2	NA	TRUE	NA	NA	NA	C	coding	906	2721	151	2871	15.0	-4396	False	AATAAA	-16
PB.2530.3	chr12	+	3930	27	full-splice_match	DDX11	ENST00000542838.5	3079	27	3	-854	3	6	multi-exon	FALSE	canonical	1	2904	junction_24	103733.54019499235	NA	0	NA	TRUE	NA	NA	NA	C	coding	906	2721	249	2969	20.0	-4372	False	AATAAA	-22
PB.2530.2	chr12	+	4328	26	novel_in_catalog	DDX11	novel	3079	27	NA	NA	-1	5	intron_retention	FALSE	canonical	1	2904	junction_23	104800.43568981191	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	1614	3368	20.0	-4376	False	AATAAA	-21
PB.453.1	chr1	+	2966	12	incomplete-splice_match	CACHD1	ENST00000470527.1	5260	27	102457	3	1934	2	5prime_fragment	FALSE	canonical	1	78687	junction_7	16943.195551729084	NA	0	NA	TRUE	NA	NA	NA	A	coding	467	1404	69	1472	25.0	2402	False	AATAAA	-17
PB.6217.1	chr19	-	1619	8	full-splice_match	HSPBP1	ENST00000433386.6	1572	8	-50	3	-50	-3	multi-exon	FALSE	canonical	1	306777	junction_6	186082.71429816211	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	288	1367	5.0	7553	False	AATAAA	-14
PB.8943.2	chr4	+	4664	2	novel_not_in_catalog	AC023886.1	novel	685	2	NA	NA	-1008	1716	intron_retention	FALSE	canonical	1	4598	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	B	coding	103	312	2796	3107	45.0	NA	False	AATAAA	-23
PB.9874.33	chr6	-	3541	24	novel_in_catalog	BAG6	novel	488	2	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	1	97477	junction_20	580583.866422561	NA	2	1	TRUE	NA	NA	NA	C	coding	1108	3327	125	3451	10.0	8411	False	AATAAA	-18
PB.11970.1	chrX	+	2469	12	full-splice_match	EGFL6	ENST00000361306.5	2398	12	-71	0	-71	0	multi-exon	FALSE	canonical	1	27979	junction_9	7865.026970053531	NA	0	NA	TRUE	NA	NA	NA	A	coding	553	1662	329	1990	20.0	-203	False	TTTAAA	-30
PB.10824.3	chr7	-	4054	17	novel_in_catalog	RBM28	novel	15507	19	NA	NA	-1	-32	intron_retention	FALSE	canonical	1	213125	junction_8	71600.42978997664	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	2376	3686	30.0	-2	True	NA	NA
PB.10824.2	chr7	-	2612	19	full-splice_match	RBM28	ENST00000223073.6	15507	19	100	12795	62	0	multi-exon	FALSE	canonical	1	213125	junction_9	69212.81489503548	NA	1	NA	TRUE	NA	NA	NA	C	coding	759	2280	16	2295	20.0	-1	True	AAAAAG	-2
PB.10824.1	chr7	-	2922	18	novel_in_catalog	RBM28	novel	15507	19	NA	NA	13	-27	intron_retention	TRUE	canonical	1	213125	junction_9	71211.14902217787	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	1419	2549	20.0	12	True	NA	NA
PB.5823.1	chr19	-	2872	1	incomplete-splice_match	UNC13A	ENST00000519716.6	9838	44	83999	1	7960	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	6493	False	ATTAAA	-27
PB.10824.6	chr7	-	2541	19	full-splice_match	RBM28	ENST00000223073.6	15507	19	94	12872	56	-77	multi-exon	FALSE	canonical	1	213125	junction_9	69212.81489503548	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	22	2301	25.0	93	False	NA	NA
PB.10824.5	chr7	-	2795	18	novel_in_catalog	RBM28	novel	15507	19	NA	NA	7	-77	intron_retention	FALSE	canonical	1	213125	junction_9	71211.14902217787	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	1425	2555	25.0	6	True	NA	NA
PB.10824.4	chr7	-	2813	20	novel_in_catalog	RBM28	novel	15507	19	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	1	5455	junction_19	112199.96871309205	NA	0	NA	TRUE	NA	NA	NA	C	coding	793	2382	119	2500	30.0	-4	True	NA	NA
PB.1625.1	chr10	+	2177	6	full-splice_match	TRIM8	ENST00000643721.1	7290	6	2750	2363	52	-1	multi-exon	FALSE	canonical	1	688799	junction_1	112695.63814558218	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	132	1214	5.0	-14	True	AATAAA	-18
PB.1625.3	chr10	+	2167	6	full-splice_match	TRIM8	ENST00000487927.6	768	6	-54	-1345	-54	-1	multi-exon	FALSE	canonical	1	911	junction_1	380213.09528389474	NA	6	NA	TRUE	NA	NA	NA	C	coding	360	1083	125	1207	5.0	0	True	AATAAA	-15
PB.1625.2	chr10	+	2521	6	full-splice_match	TRIM8	ENST00000643721.1	7290	6	2161	2608	-24	27	multi-exon	FALSE	canonical	1	688799	junction_1	112695.63814558218	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	148	1803	70.0	-14	True	NA	NA
PB.9390.4	chr5	+	3248	16	full-splice_match	APC	ENST00000257430.8	10701	16	-28	7481	-25	-296	multi-exon	FALSE	canonical	1	36509	junction_1	43207.755323424164	NA	3	NA	TRUE	NA	NA	NA	C	coding	1054	3162	85	3246	65.0	-28	True	AATGAA	-24
PB.9390.5	chr5	+	3300	17	novel_in_catalog	APC	novel	524	4	NA	NA	-18	-291	combination_of_known_junctions	FALSE	canonical	1	21372	junction_12	54908.44059485385	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3222	78	3299	65.0	-21	True	AATGAA	-29
PB.930.1	chr1	+	1477	7	incomplete-splice_match	FMO4	ENST00000367749.3	2252	10	-81	8937	-55	0	3prime_fragment	TRUE	canonical	1	21883	junction_3	4780.128708750657	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	412	1368	30.0	-6	True	AATAAA	-15
PB.9390.1	chr5	+	6086	16	novel_in_catalog	APC	novel	524	4	NA	NA	-10	-1232	combination_of_known_junctions	FALSE	canonical	1	9249	junction_1	47568.44353700606	NA	2	NA	TRUE	NA	NA	NA	C	coding	1976	5928	158	6085	75.0	-10	True	NA	NA
PB.9390.2	chr5	+	6316	16	novel_in_catalog	APC	novel	524	4	NA	NA	-7	-1232	combination_of_known_junctions	FALSE	canonical	1	54117	junction_1	40747.75322264202	NA	0	NA	TRUE	NA	NA	NA	C	coding	1976	5928	388	6315	75.0	-7	True	NA	NA
PB.4694.1	chr17	+	2220	11	novel_in_catalog	ENO3	novel	343	2	NA	NA	-55	0	intron_retention	FALSE	canonical	1	31054	junction_1	447237.95379614196	NA	2	NA	TRUE	NA	NA	NA	A	coding	308	927	499	1425	20.0	-6469	False	AATAAA	-15
PB.1887.7	chr11	+	3684	27	incomplete-splice_match	NAT10	ENST00000257829.7	4002	29	3137	7	530	0	5prime_fragment	FALSE	canonical	1	314742	junction_11	149656.84177201215	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	22	2973	30.0	-1847	False	AATAAA	-12
PB.1887.6	chr11	+	3000	21	novel_not_in_catalog	NAT10	novel	4002	29	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_5	194785.11698917733	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	178	2289	30.0	2	True	AATAAA	-12
PB.1887.5	chr11	+	3745	27	novel_in_catalog	NAT10	novel	4002	29	NA	NA	12	0	intron_retention	FALSE	canonical	1	1155	junction_6	177501.14399285067	NA	5	2	TRUE	NA	NA	NA	C	coding	617	1854	1181	3034	30.0	0	True	AATAAA	-12
PB.1887.4	chr11	+	4235	30	novel_in_catalog	NAT10	novel	4002	29	NA	NA	12	0	intron_retention	FALSE	canonical	1	2094	junction_1	186982.73117619552	NA	1	NA	TRUE	NA	NA	NA	C	coding	1025	3078	447	3524	30.0	0	True	AATAAA	-12
PB.1887.3	chr11	+	3241	29	full-splice_match	NAT10	ENST00000257829.7	4002	29	3	758	3	-100	multi-exon	FALSE	canonical	1	271948	junction_1	150889.37438176406	NA	0	NA	TRUE	NA	NA	NA	C	coding	1012	3036	204	3239	70.0	-24	True	NA	NA
PB.1887.2	chr11	+	3965	29	novel_not_in_catalog	NAT10	novel	4002	29	NA	NA	0	0	intron_retention	FALSE	canonical	1	3045	junction_1	170489.4391848399	NA	0	NA	TRUE	NA	NA	NA	C	coding	983	2952	303	3254	30.0	-27	True	AATAAA	-12
PB.1887.1	chr11	+	3893	29	full-splice_match	NAT10	ENST00000257829.7	4002	29	102	7	87	0	multi-exon	FALSE	canonical	1	271948	junction_1	150889.37438176406	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3078	105	3182	30.0	-4882	False	AATAAA	-12
PB.5324.5	chr17	+	2854	21	novel_in_catalog	HGS	novel	644	5	NA	NA	5	1	no_combination_of_known_junctions	FALSE	canonical	1	13181	junction_13	226794.6254717911	NA	0	NA	TRUE	NA	NA	NA	C	coding	757	2274	79	2352	20.0	-22	True	AATAAA	-17
PB.5324.4	chr17	+	2774	23	novel_not_in_catalog	HGS	novel	644	5	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	219250.55098537492	NA	3	1	TRUE	NA	NA	NA	C	coding	777	2334	83	2416	20.0	-26	True	AATAAA	-16
PB.5324.7	chr17	+	2979	21	novel_in_catalog	HGS	novel	644	5	NA	NA	10	1	intron_retention	FALSE	canonical	1	572223	junction_1	130473.7087419914	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	1425	2477	20.0	-17	True	AATAAA	-17
PB.5324.6	chr17	+	3760	21	novel_in_catalog	HGS	novel	644	5	NA	NA	7	0	intron_retention	FALSE	canonical	1	572223	junction_1	133927.80775529778	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	1706	3259	20.0	-20	True	AATAAA	-16
PB.5324.1	chr17	+	3079	22	novel_in_catalog	HGS	novel	644	5	NA	NA	18	0	combination_of_known_junctions	TRUE	canonical	1	4693	junction_1	217027.1409881122	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	450	2582	25.0	-667	False	AATAAA	-12
PB.5324.3	chr17	+	3276	21	novel_in_catalog	HGS	novel	644	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	572223	junction_1	133710.24560342226	NA	21	1	TRUE	NA	NA	NA	C	coding	490	1473	84	1556	20.0	-27	True	AATAAA	-17
PB.5324.2	chr17	+	3104	23	novel_not_in_catalog	HGS	novel	644	5	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	4580	junction_22	269996.4577495561	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	95	2428	25.0	2	True	AATAAA	-12
PB.8372.3	chr3	-	3340	10	novel_in_catalog	TPRA1	novel	4235	13	NA	NA	5	-2	intron_retention	FALSE	canonical	1	125486	junction_9	126629.24093413635	NA	0	NA	TRUE	NA	NA	NA	C	coding	285	858	373	1230	25.0	7466	False	AATAAA	-16
PB.8372.2	chr3	-	1718	11	full-splice_match	TPRA1	ENST00000355552.7	1933	11	231	-16	161	-2	multi-exon	FALSE	canonical	1	125486	junction_10	120442.90448378435	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	147	1268	25.0	-45	True	AATAAA	-16
PB.8372.1	chr3	-	2491	10	novel_in_catalog	TPRA1	novel	4235	13	NA	NA	13	22	intron_retention	TRUE	canonical	1	125486	junction_9	123954.93775651787	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	330	839	20.0	11	True	AATAAA	-40
PB.5324.9	chr17	+	2864	22	novel_in_catalog	HGS	novel	644	5	NA	NA	18	-2	combination_of_known_junctions	TRUE	canonical	1	8160	junction_21	219264.8772168094	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	66	2369	30.0	-9	True	AATAAA	-10
PB.5324.8	chr17	+	2975	23	novel_not_in_catalog	HGS	novel	644	5	NA	NA	18	0	any annotated donor/acceptor	FALSE	canonical	1	12844	junction_2	269774.50113037095	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	346	2478	25.0	-9	True	AATAAA	-12
PB.8372.5	chr3	-	1813	11	novel_in_catalog	TPRA1	novel	4235	13	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	18621	junction_10	147946.90293493812	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	242	1363	25.0	7124	False	AATAAA	-16
PB.2159.1	chr11	-	3899	14	full-splice_match	PGM2L1	ENST00000298198.4	8515	14	9	4607	9	-4607	multi-exon	TRUE	canonical	1	71877	junction_12	22698.53667102611	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	304	2172	90.0	-73	True	NA	NA
PB.3321.1	chr14	-	1036	3	full-splice_match	PSMB5	ENST00000361611.10	1294	3	251	7	0	0	multi-exon	FALSE	canonical	1	2337922	junction_2	29502.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	263	792	14	805	20.0	-10	True	NA	NA
PB.7133.11	chr20	+	4000	9	novel_not_in_catalog	SIRPA	novel	4201	9	NA	NA	100	-1	any annotated donor/acceptor	FALSE	canonical	1	1709	junction_5	83120.67960501766	NA	5	NA	TRUE	NA	NA	NA	C	coding	539	1620	53	1672	10.0	-11	True	AATAAA	-22
PB.7133.10	chr20	+	2487	8	incomplete-splice_match	SIRPA	ENST00000622179.4	4570	9	873	2131	85	-1433	5prime_fragment	FALSE	canonical	1	4497	junction_3	79243.02919835038	NA	1	NA	TRUE	NA	NA	NA	C	coding	508	1527	68	1594	10.0	-26	True	AAAACA	-12
PB.2076.6	chr11	-	2693	6	full-splice_match	EIF1AD	ENST00000529964.5	808	6	-4	-1881	-4	-7	multi-exon	FALSE	canonical	1	30941	junction_5	142176.88558496418	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	149	646	30.0	-15	True	AATAAA	-12
PB.9874.31	chr6	-	3746	25	novel_in_catalog	BAG6	novel	488	2	NA	NA	-8	-12	combination_of_known_junctions	FALSE	canonical	1	22457	junction_24	590603.3285961328	NA	6	NA	TRUE	NA	NA	NA	C	coding	1125	3378	279	3656	10.0	-1	True	AATAAA	-18
PB.2076.4	chr11	-	2887	6	full-splice_match	EIF1AD	ENST00000527249.5	889	6	17	-2015	1	-7	multi-exon	FALSE	canonical	1	62190	junction_5	129885.90686999109	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	343	840	30.0	-4	True	AATAAA	-12
PB.2076.5	chr11	-	2840	6	novel_in_catalog	EIF1AD	novel	2761	6	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	1	28873	junction_5	142991.55542198988	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	296	793	30.0	284	False	AATAAA	-12
PB.2076.2	chr11	-	2792	6	novel_in_catalog	EIF1AD	novel	2761	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	15029	junction_5	148448.84288319663	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	244	741	20.0	-11	True	AATAAA	-16
PB.2076.3	chr11	-	2775	6	full-splice_match	EIF1AD	ENST00000526451.5	2761	6	-19	5	1	-5	multi-exon	FALSE	canonical	1	52485	junction_5	133698.9741330875	NA	2	NA	TRUE	NA	NA	NA	C	coding	165	498	229	726	25.0	296	False	AATAAA	-14
PB.2076.1	chr11	-	2915	6	full-splice_match	EIF1AD	ENST00000533544.5	965	6	-3	-1947	0	-1	multi-exon	FALSE	canonical	1	34760	junction_5	140672.80959815937	NA	9	NA	TRUE	NA	NA	NA	C	coding	165	498	365	862	20.0	-2	True	AATAAA	-18
PB.8820.1	chr4	+	2377	2	full-splice_match	MTHFD2L	ENST00000461101.1	2363	2	-12	-2	-2	2	multi-exon	FALSE	canonical	1	187418	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-12	True	NA	NA
PB.8820.3	chr4	+	2445	10	novel_not_in_catalog	MTHFD2L	novel	1798	10	NA	NA	11	0	any annotated donor/acceptor	TRUE	canonical	1	2027	junction_9	52708.14488421882	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	219	1106	35.0	11	True	AATAAA	-10
PB.8820.2	chr4	+	2351	8	full-splice_match	MTHFD2L	ENST00000395759.6	2354	8	3	0	-3	0	multi-exon	FALSE	canonical	1	12001	junction_1	18772.652285618424	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	25	1068	35.0	-3	True	AATAAA	-10
PB.443.5	chr1	-	2972	5	novel_not_in_catalog	TM2D1	novel	969	7	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_4	264487.79607762623	NA	2	NA	TRUE	NA	NA	NA	B	coding	154	465	34	498	15.0	-21	False	AATAAA	-17
PB.443.4	chr1	-	3165	7	novel_not_in_catalog	TM2D1	novel	969	7	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	275896.6313070088	NA	0	NA	TRUE	NA	NA	NA	B	coding	222	669	23	691	15.0	-10	True	AATAAA	-17
PB.443.6	chr1	-	2646	4	novel_not_in_catalog	TM2D1	novel	969	7	NA	NA	-7	-1249	intron_retention	FALSE	non_canonical	0	0	junction_3	254069.71255586963	NA	0	NA	TRUE	NA	NA	NA	B	coding	181	546	32	577	85.0	-19	False	NA	NA
PB.443.1	chr1	-	3036	6	novel_not_in_catalog	TM2D1	novel	969	7	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_5	231061.0757852564	NA	0	NA	TRUE	NA	NA	NA	B	coding	207	624	21	644	15.0	-8	True	AATAAA	-20
PB.6937.6	chr2	+	2840	12	full-splice_match	BZW1	ENST00000409600.5	6875	12	364	3671	0	429	multi-exon	FALSE	canonical	1	396	junction_10	886544.858005029	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	92	1351	15.0	0	True	AATAAA	-32
PB.443.2	chr1	-	3036	5	novel_in_catalog	TM2D1	novel	969	7	NA	NA	-17	0	intron_retention	FALSE	canonical	1	23673	junction_4	247272.67175832432	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-29	False	AATAAA	-18
PB.3302.3	chr14	-	4201	24	novel_in_catalog	SUPT16H	novel	4684	26	NA	NA	-35	-1	no_combination_of_known_junctions	FALSE	canonical	1	3044	junction_23	289270.7857432578	NA	0	NA	TRUE	NA	NA	NA	C	coding	959	2880	122	3001	15.0	-7	False	AATAAA	-35
PB.3302.2	chr14	-	4746	26	full-splice_match	SUPT16H	ENST00000216297.6	4684	26	-81	19	-81	-12	multi-exon	FALSE	canonical	1	153336	junction_24	274844.71571066015	NA	2	NA	TRUE	NA	NA	NA	C	coding	1047	3144	421	3564	20.0	-306	False	AATAAA	-17
PB.3302.1	chr14	-	5473	26	full-splice_match	SUPT16H	ENST00000216297.6	4684	26	248	-1037	-5	1037	multi-exon	FALSE	canonical	1	153336	junction_24	274844.71571066015	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	92	3235	40.0	0	True	NA	NA
PB.9801.2	chr6	+	3068	8	novel_not_in_catalog	BTN2A1	novel	2845	7	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	1093	junction_1	66918.66896037736	NA	0	NA	TRUE	NA	NA	NA	C	coding	527	1584	397	1980	25.0	0	True	NA	NA
PB.9801.5	chr6	+	2984	7	novel_in_catalog	BTN2A1	novel	2845	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	100262	junction_6	42824.79882582313	NA	19	1	TRUE	NA	NA	NA	C	coding	330	993	225	1217	25.0	-6	True	NA	NA
PB.9801.4	chr6	+	4791	7	incomplete-splice_match	BTN2A1	ENST00000312541.9	2920	8	7	-19	7	3	intron_retention	FALSE	canonical	1	113675	junction_3	32017.63261947322	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	242	1237	25.0	1	True	NA	NA
PB.9801.7	chr6	+	3002	9	full-splice_match	BTN2A1	ENST00000377600.7	3024	9	28	-6	0	6	multi-exon	FALSE	canonical	1	54873	junction_3	58857.88829447056	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	781	1908	30.0	-5	True	NA	NA
PB.9801.6	chr6	+	2783	7	full-splice_match	BTN2A1	ENST00000541522.5	2845	7	45	17	-1	-1	multi-exon	FALSE	canonical	1	24454	junction_1	59632.61796314907	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	296	1696	20.0	-6	True	NA	NA
PB.9801.9	chr6	+	2604	3	incomplete-splice_match	BTN2A1	ENST00000429381.5	3113	8	-9	7856	2	-1472	3prime_fragment	FALSE	canonical	1	198965	junction_1	454.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	209	630	222	851	75.0	-3	True	NA	NA
PB.9801.8	chr6	+	2889	8	full-splice_match	BTN2A1	ENST00000312541.9	2920	8	30	1	5	-1	multi-exon	FALSE	canonical	1	100262	junction_7	39807.208955367954	NA	4	1	TRUE	NA	NA	NA	C	coding	527	1584	219	1802	20.0	0	True	NA	NA
PB.8779.47	chr4	+	1792	17	novel_in_catalog	FIP1L1	novel	582	7	NA	NA	4	-49	combination_of_known_junctions	FALSE	canonical	1	199597	junction_1	214827.25753176922	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1602	191	1792	70.0	6	True	NA	NA
PB.2182.14	chr11	-	3045	15	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-53	-11	combination_of_known_junctions	FALSE	canonical	1	973	junction_14	206010.13147917343	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	162	1799	35.0	802	False	AATAAA	-7
PB.2182.15	chr11	-	2362	15	full-splice_match	PAK1	ENST00000356341.7	3737	15	105	1270	103	-29	multi-exon	FALSE	canonical	1	120202	junction_14	180338.36753555178	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	428	2065	30.0	8	True	AATAAA	-22
PB.2182.16	chr11	-	2211	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-16	-28	combination_of_known_junctions	FALSE	canonical	1	10038	junction_15	250556.39969960187	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	276	1913	30.0	-9	True	AATAAA	-23
PB.11470.4	chr9	+	2059	3	full-splice_match	CNTLN	ENST00000484374.1	2272	3	10	203	10	-203	multi-exon	FALSE	canonical	1	14370	junction_2	36801.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	170	513	174	686	80.0	1	True	AAAAAG	-34
PB.2182.11	chr11	-	3494	16	full-splice_match	PAK1	ENST00000278568.8	2543	16	-30	-921	-28	-10	multi-exon	FALSE	canonical	1	53110	junction_2	264612.2811482994	NA	4	NA	TRUE	NA	NA	NA	C	coding	553	1662	561	2222	40.0	3	True	AATAAA	-8
PB.2182.12	chr11	-	5998	14	novel_not_in_catalog	PAK1	novel	3737	15	NA	NA	-81	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	213523.68562811252	NA	2	NA	TRUE	NA	NA	NA	C	coding	348	1047	3696	4742	15.0	7	True	AATAAA	-17
PB.2182.13	chr11	-	3125	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	33	-9	no_combination_of_known_junctions	FALSE	canonical	1	2332	junction_15	251766.26092756924	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	240	1877	40.0	18	True	AATAAA	-9
PB.3670.5	chr14	-	3505	10	novel_in_catalog	HSP90AA1	novel	3379	11	NA	NA	0	-5	intron_retention	FALSE	canonical	1	882781	junction_8	1583836.8175887952	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	60	1838	40.0	-1	True	AATACA	-9
PB.3670.4	chr14	-	4037	8	novel_in_catalog	HSP90AA1	novel	3379	11	NA	NA	0	-5	intron_retention	FALSE	canonical	1	882781	junction_6	1644256.0866315123	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	60	1652	40.0	-1	True	AATACA	-9
PB.2302.10	chr11	+	4672	20	full-splice_match	UBE4A	ENST00000252108.7	6103	20	34	1397	-25	1307	multi-exon	FALSE	canonical	1	244713	junction_8	57216.584225921724	NA	0	NA	TRUE	NA	NA	NA	C	coding	1066	3201	98	3298	30.0	-15	True	AATAAA	-23
PB.3670.6	chr14	-	3037	11	full-splice_match	HSP90AA1	ENST00000216281.12	3379	11	26	316	26	-5	multi-exon	FALSE	canonical	1	882781	junction_9	1525693.287590599	NA	1	NA	TRUE	NA	NA	NA	C	coding	732	2199	181	2379	40.0	400	False	AATACA	-9
PB.2182.18	chr11	-	2191	15	novel_in_catalog	PAK1	novel	3737	15	NA	NA	58	-27	combination_of_known_junctions	FALSE	canonical	1	289186	junction_14	147292.42970917636	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	255	1892	30.0	20	False	AATAAA	-24
PB.2182.19	chr11	-	2068	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-100	-28	no_combination_of_known_junctions	FALSE	canonical	1	2332	junction_15	251766.26092756924	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	133	1770	30.0	-12	True	AATAAA	-23
PB.11470.2	chr9	+	2100	13	incomplete-splice_match	CNTLN	ENST00000380647.7	5576	26	9	137168	9	64704	3prime_fragment	FALSE	canonical	1	29038	junction_7	26879.740856265707	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1776	325	2100	35.0	0	True	AATAAA	-19
PB.4006.1	chr15	-	2341	4	novel_not_in_catalog	PEAK1	novel	19217	7	NA	NA	-71	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	26250.135559438335	NA	1	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	55.0	-16	True	AATAAA	-18
PB.12135.21	chrX	+	3744	22	full-splice_match	OGT	ENST00000373719.7	5461	22	22	1695	1	386	multi-exon	FALSE	canonical	1	275340	junction_4	322124.1795623632	NA	0	NA	TRUE	NA	NA	NA	C	coding	1046	3141	196	3336	25.0	1	True	TTTAAA	-18
PB.3753.8	chr15	-	3927	7	novel_in_catalog	KATNBL1	novel	2723	10	NA	NA	1	150	intron_retention	FALSE	canonical	1	4697	junction_1	17416.269842369293	NA	4	NA	TRUE	NA	NA	NA	C	coding	203	612	125	736	40.0	34	False	ATTAAA	-19
PB.12135.22	chrX	+	3334	22	full-splice_match	OGT	ENST00000373701.7	3310	22	-18	-6	1	6	multi-exon	FALSE	canonical	1	110034	junction_1	386962.3928097036	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	196	3306	25.0	1	True	AATAAA	-24
PB.3753.5	chr15	-	3612	8	novel_in_catalog	KATNBL1	novel	2723	10	NA	NA	2	563	intron_retention	FALSE	canonical	1	12013	junction_1	15285.535251287976	NA	3	NA	TRUE	NA	NA	NA	C	coding	233	702	140	841	20.0	19	False	AGTAAA	-17
PB.3753.4	chr15	-	2055	10	full-splice_match	KATNBL1	ENST00000256544.7	2723	10	-44	712	-27	576	multi-exon	FALSE	canonical	1	12013	junction_1	15860.858671663054	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	188	1102	30.0	-29	False	AGTAAA	-30
PB.3753.7	chr15	-	1589	10	full-splice_match	KATNBL1	ENST00000256544.7	2723	10	-4	1138	-4	150	multi-exon	FALSE	canonical	1	12013	junction_1	15860.858671663054	NA	2	NA	TRUE	NA	NA	NA	C	coding	304	915	148	1062	40.0	11	False	ATTAAA	-19
PB.3753.6	chr15	-	1761	7	novel_in_catalog	KATNBL1	novel	2723	10	NA	NA	2	561	combination_of_known_junctions	FALSE	canonical	1	4106	junction_2	18224.183548241606	NA	1	NA	TRUE	NA	NA	NA	C	coding	227	684	140	823	20.0	19	False	AGTAAA	-15
PB.3753.1	chr15	-	2737	10	full-splice_match	KATNBL1	ENST00000256544.7	2723	10	-15	1	2	-1	multi-exon	FALSE	canonical	1	12013	junction_1	15860.858671663054	NA	1	NA	TRUE	NA	NA	NA	C	coding	304	915	159	1073	20.0	0	True	GATAAA	-22
PB.3753.3	chr15	-	2204	11	novel_in_catalog	KATNBL1	novel	2723	10	NA	NA	4	577	combination_of_known_junctions	FALSE	canonical	1	7972	junction_10	14707.598236625854	NA	2	NA	TRUE	NA	NA	NA	C	coding	304	915	336	1250	35.0	2	True	AGTAAA	-31
PB.3753.2	chr15	-	2626	10	novel_not_in_catalog	KATNBL1	novel	2723	10	NA	NA	0	-1	any annotated donor/acceptor	FALSE	canonical	1	9171	junction_7	17723.270004553928	NA	2	NA	TRUE	NA	NA	NA	C	coding	272	819	144	962	20.0	15	False	GATAAA	-22
PB.3712.27	chr14	-	2485	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240985	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	568301.8626156421	NA	5	1	TRUE	NA	NA	NA	B	coding	120	363	713	1075	15.0	-6808	False	AATAAA	-21
PB.3428.13	chr14	-	8024	30	novel_not_in_catalog	NIN	novel	10293	31	NA	NA	-383	-7	any annotated donor/acceptor	FALSE	canonical	1	1830	junction_29	97007.49784117447	NA	2	NA	TRUE	NA	NA	NA	C	coding	1420	4263	123	4385	20.0	-3	True	AATAAA	-10
PB.3712.25	chr14	-	3029	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-240993	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	865721.8036980495	NA	6	1	TRUE	NA	NA	NA	B	coding	406	1221	399	1619	15.0	-6816	False	AATAAA	-21
PB.3712.24	chr14	-	3105	9	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-215675	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	704234.2472909848	NA	7	1	TRUE	NA	NA	NA	B	coding	265	798	898	1695	15.0	0	True	AATAAA	-21
PB.4737.2	chr17	+	1354	2	full-splice_match	CHRNB1	ENST00000575379.1	1095	2	23	-282	23	-96	multi-exon	FALSE	canonical	1	220324	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-4	True	AATAAA	-18
PB.3428.17	chr14	-	4665	30	novel_in_catalog	NIN	novel	10293	31	NA	NA	-18	148	combination_of_known_junctions	FALSE	canonical	1	48689	junction_29	92294.9904025557	NA	0	NA	TRUE	NA	NA	NA	C	coding	1420	4263	210	4472	40.0	22	True	AATAAA	-22
PB.3428.14	chr14	-	2057	1	incomplete-splice_match	NIN	ENST00000245441.9	10293	31	109241	61	4534	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-10
PB.4737.1	chr17	+	2319	10	full-splice_match	CHRNB1	ENST00000536404.6	1623	10	-10	-686	-10	-95	multi-exon	TRUE	canonical	1	13819	junction_1	52855.571558402735	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	141	1430	5.0	-29	True	AATAAA	-19
PB.581.1	chr1	-	3302	10	full-splice_match	SLC25A24	ENST00000565488.5	4271	10	184	785	105	-1	multi-exon	TRUE	canonical	1	267029	junction_8	57962.1052255078	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	37	1470	15.0	-1	True	AATATA	-18
PB.3428.18	chr14	-	6827	31	full-splice_match	NIN	ENST00000245441.9	10293	31	-41	3507	-41	148	multi-exon	FALSE	canonical	1	48689	junction_30	100175.54101392326	NA	0	NA	TRUE	NA	NA	NA	C	coding	2133	6402	233	6634	40.0	-1	True	AATAAA	-22
PB.3428.19	chr14	-	6468	29	full-splice_match	NIN	ENST00000324330.13	4364	29	-50	-2054	-50	-361	multi-exon	FALSE	canonical	1	48689	junction_28	92407.60416442018	NA	0	NA	TRUE	NA	NA	NA	C	coding	1377	4134	242	4375	35.0	1842	False	AATAAA	-17
PB.851.13	chr1	+	2750	17	novel_in_catalog	NCSTN	novel	2936	17	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	5344	junction_5	303903.5053140776	NA	0	NA	TRUE	NA	NA	NA	C	coding	687	2064	10	2073	25.0	2	True	ATTAAA	-15
PB.3712.29	chr14	-	3105	9	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-291278	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	692556.8591363095	NA	5	1	TRUE	NA	NA	NA	B	coding	538	1617	80	1696	15.0	-1	True	AATAAA	-20
PB.3712.28	chr14	-	3168	8	novel_not_in_catalog	IGHG3	novel	2751	9	NA	NA	-215676	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	156618.72261068944	NA	7	1	TRUE	NA	NA	NA	B	coding	199	600	1160	1759	15.0	-1	True	AATAAA	-20
PB.10628.1	chr7	+	1458	9	full-splice_match	ZP3	ENST00000336517.8	1483	9	5	20	5	-11	multi-exon	TRUE	canonical	1	7308	junction_6	131915.2009569026	NA	0	NA	TRUE	NA	NA	NA	A	coding	372	1116	342	1457	70.0	1	True	NA	NA
PB.7043.2	chr2	-	2140	9	full-splice_match	SERPINE2	ENST00000409304.5	2161	9	-2	23	0	18	multi-exon	FALSE	canonical	1	893005	junction_8	460077.7290179991	NA	35	2	TRUE	NA	NA	NA	C	coding	397	1194	215	1408	65.0	-5	True	AATAAA	-42
PB.981.4	chr1	+	5716	22	novel_in_catalog	SMG7	novel	1190	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26724	junction_3	123193.17155911545	NA	2	NA	TRUE	NA	NA	NA	C	coding	756	2271	1187	3457	20.0	-5	True	ATTAAA	-18
PB.9445.14	chr5	-	2115	10	novel_in_catalog	AFF4	novel	9552	21	NA	NA	0	19	combination_of_known_junctions	FALSE	canonical	1	18860	junction_6	99358.80639839421	NA	1	NA	TRUE	NA	NA	NA	C	coding	583	1749	365	2113	40.0	269	False	NA	NA
PB.7130.2	chr20	+	4691	1	novel_in_catalog	SDCBP2-AS1	novel	855	2	NA	NA	4	-15783	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	60.0	6	True	TATAAA	-5
PB.354.6	chr1	+	4419	22	novel_not_in_catalog	AL451062.3	novel	4037	26	NA	NA	313	-225547	any annotated donor/acceptor	FALSE	canonical	1	23137	junction_1	94346.77579855481	NA	0	NA	TRUE	NA	NA	NA	B	coding	1064	3195	128	3322	30.0	-44	False	TATAAA	-14
PB.7130.1	chr20	+	2815	3	novel_not_in_catalog	SDCBP2-AS1	novel	855	2	NA	NA	-36	578	intron_retention	FALSE	canonical	1	13183	junction_1	4444.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	42	129	194	322	90.0	-560	False	NA	NA
PB.1021.9	chr1	+	4172	11	novel_not_in_catalog	NEK7	novel	4149	10	NA	NA	2	-37	any annotated donor/acceptor	FALSE	canonical	1	2722	junction_1	237248.99672793137	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	283	1311	80.0	2	True	AAAAAG	-43
PB.354.7	chr1	+	3414	22	novel_not_in_catalog	AL451062.3	novel	4037	26	NA	NA	324	-226541	any annotated donor/acceptor	FALSE	canonical	1	23137	junction_1	94346.77579855481	NA	0	NA	TRUE	NA	NA	NA	B	coding	1064	3195	117	3311	70.0	-14	True	NA	NA
PB.354.4	chr1	+	4716	23	novel_not_in_catalog	AL451062.3	novel	4037	26	NA	NA	-6	-225497	any annotated donor/acceptor	FALSE	canonical	1	6243	junction_20	116759.49162837304	NA	1	NA	TRUE	NA	NA	NA	B	coding	948	2847	150	2996	15.0	-363	False	AATAAA	-17
PB.9815.1	chr6	+	2263	4	novel_not_in_catalog	ZNF165	novel	2107	4	NA	NA	-733	-17	any annotated donor/acceptor	FALSE	canonical	1	32201	junction_1	7445.795248923307	NA	2	NA	TRUE	NA	NA	NA	A	coding	485	1458	730	2187	50.0	-1024	False	AATAAA	-16
PB.11894.1	chr9	-	4051	7	incomplete-splice_match	CAMSAP1	ENST00000312405.10	6054	15	61816	-1093	-2015	-1	5prime_fragment	FALSE	canonical	1	148719	junction_6	32931.008273611464	NA	0	NA	TRUE	NA	NA	NA	B	coding	408	1227	4	1230	30.0	NA	False	AATAAA	-19
PB.981.5	chr1	+	2654	17	incomplete-splice_match	SMG7	ENST00000347615.6	5788	22	1	8055	0	2	3prime_fragment	FALSE	canonical	1	129392	junction_1	91387.25580477479	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2535	119	2653	55.0	-4	True	NA	NA
PB.5526.1	chr18	+	8072	9	novel_in_catalog	ZNF407	novel	5662	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	54274	junction_1	12397.057642339976	NA	0	NA	TRUE	NA	NA	NA	B	coding	2247	6744	125	6868	25.0	0	True	AATAAA	-20
PB.588.2	chr1	+	2641	2	novel_in_catalog	TMEM167B	novel	3730	3	NA	NA	-21	-1	no_combination_of_known_junctions	FALSE	canonical	1	16883	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-15	True	AATAAA	-16
PB.588.1	chr1	+	2759	3	full-splice_match	TMEM167B	ENST00000338272.8	3730	3	970	1	-7	-1	multi-exon	FALSE	canonical	1	278404	junction_1	59181.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	27	84	322	405	20.0	-1	True	AATAAA	-16
PB.5526.2	chr18	+	4306	2	incomplete-splice_match	ZNF407	ENST00000582337.5	5662	5	9	169414	9	-169411	3prime_fragment	FALSE	canonical	1	54274	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	1397	4191	116	4306	55.0	9	True	NA	NA
PB.8835.1	chr4	+	2252	2	full-splice_match	STBD1	ENST00000237642.6	3420	2	698	470	698	-470	multi-exon	FALSE	canonical	1	151011	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	358	1077	47	1123	25.0	-18	True	AATAAA	-21
PB.1021.3	chr1	+	2529	10	full-splice_match	NEK7	ENST00000367385.8	4149	10	7	1613	7	1058	multi-exon	FALSE	canonical	1	247655	junction_1	151996.90365129235	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	357	1244	35.0	-117	False	AATAAA	-43
PB.9314.1	chr5	-	2227	9	full-splice_match	HOMER1	ENST00000334082.10	5881	9	366	3288	366	6	multi-exon	FALSE	canonical	1	120750	junction_6	28143.184667595368	NA	1	NA	TRUE	NA	NA	NA	A	coding	354	1065	1078	2142	95.0	-7	True	NA	NA
PB.4074.2	chr15	+	3713	15	full-splice_match	SEMA4B	ENST00000332496.10	3781	15	55	13	55	-3	multi-exon	FALSE	canonical	1	49552	junction_1	93154.47779779893	NA	1	1	TRUE	NA	NA	NA	C	coding	837	2514	186	2699	10.0	-6904	False	AATAAA	-19
PB.4074.3	chr15	+	3781	14	full-splice_match	SEMA4B	ENST00000411539.6	3807	14	8	18	8	-2	multi-exon	FALSE	canonical	1	181006	junction_1	64141.29434801775	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	268	2766	10.0	-3	True	AATAAA	-20
PB.4074.1	chr15	+	3548	14	novel_in_catalog	SEMA4B	novel	559	4	NA	NA	-12	-2	intron_retention	TRUE	canonical	1	4959	junction_1	100419.18931148734	NA	6	NA	TRUE	NA	NA	NA	C	coding	681	2046	488	2533	10.0	-7016	False	AATAAA	-20
PB.1021.1	chr1	+	4045	10	full-splice_match	NEK7	ENST00000367385.8	4149	10	71	33	36	-33	multi-exon	FALSE	canonical	1	247655	junction_1	151996.90365129235	NA	169	3	TRUE	NA	NA	NA	C	coding	302	909	272	1180	80.0	36	True	NA	NA
PB.3677.13	chr14	+	2657	12	full-splice_match	TRAF3	ENST00000392745.6	2459	12	42	-240	-3	240	multi-exon	FALSE	canonical	1	85903	junction_1	64237.87024839465	NA	1	NA	TRUE	NA	NA	NA	C	coding	562	1689	252	1940	50.0	-6	True	TATAAA	-29
PB.2147.1	chr11	-	1742	1	genic	AP002381.2	novel	NA	NA	NA	NA	-9	-18698	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	1	True	NA	NA
PB.8779.43	chr4	+	3556	18	full-splice_match	FIP1L1	ENST00000358575.9	2180	18	0	-1376	0	183	multi-exon	FALSE	canonical	1	199597	junction_1	222498.42216121076	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	195	1961	85.0	2	True	NA	NA
PB.1021.7	chr1	+	3936	9	novel_in_catalog	NEK7	novel	4149	10	NA	NA	0	-37	no_combination_of_known_junctions	FALSE	canonical	1	12018	junction_2	221564.39907380767	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	329	1075	80.0	0	True	AAAAAG	-43
PB.1021.6	chr1	+	3963	9	novel_in_catalog	NEK7	novel	4149	10	NA	NA	0	-37	no_combination_of_known_junctions	FALSE	canonical	1	13856	junction_8	182800.9290026568	NA	0	NA	TRUE	NA	NA	NA	C	coding	257	774	329	1102	80.0	0	True	AAAAAG	-43
PB.2046.4	chr11	+	3695	21	novel_in_catalog	CAPN1	novel	571	5	NA	NA	5	-1	intron_retention	FALSE	canonical	1	797500	junction_11	328595.24872132204	NA	0	NA	TRUE	NA	NA	NA	B	coding	456	1371	92	1462	10.0	-4	True	AATAAA	-20
PB.2046.3	chr11	+	2920	21	novel_not_in_catalog	CAPN1	novel	571	5	NA	NA	-14	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	499381.8654081539	NA	2	1	TRUE	NA	NA	NA	B	coding	713	2142	60	2201	15.0	-1550	False	AATAAA	-21
PB.2046.2	chr11	+	2937	21	novel_not_in_catalog	CAPN1	novel	571	5	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	426694.9223622511	NA	2	1	TRUE	NA	NA	NA	B	coding	713	2142	77	2218	15.0	11	True	AATAAA	-21
PB.2046.1	chr11	+	3017	21	novel_not_in_catalog	CAPN1	novel	571	5	NA	NA	61	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	499731.5282796753	NA	2	1	TRUE	NA	NA	NA	B	coding	713	2142	158	2299	10.0	22	True	AATAAA	-20
PB.11177.15	chr8	-	1760	11	full-splice_match	TRAM1	ENST00000262213.6	2785	11	57	968	27	-968	multi-exon	FALSE	canonical	1	1022454	junction_5	432062.57628613245	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	114	1238	25.0	37	True	AAAAAG	-18
PB.1021.4	chr1	+	4019	9	novel_in_catalog	NEK7	novel	4149	10	NA	NA	8	-37	no_combination_of_known_junctions	FALSE	canonical	1	3567	junction_1	214442.7756307831	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	22	1158	80.0	-116	False	AAAAAG	-43
PB.5495.1	chr18	+	2498	2	full-splice_match	AC105105.1	ENST00000591360.1	2553	2	60	-5	60	5	multi-exon	FALSE	canonical	1	5543	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1672	2013	35.0	-443	False	NA	NA
PB.11687.9	chr9	+	3501	16	incomplete-splice_match	INVS	ENST00000262457.6	3709	17	16	2749	0	-2537	3prime_fragment	FALSE	canonical	1	50524	junction_1	24798.314574986744	NA	1	NA	TRUE	NA	NA	NA	C	coding	1084	3255	170	3424	25.0	29	True	AATAAA	-16
PB.5733.1	chr19	+	2975	4	full-splice_match	ZNF440	ENST00000427505.5	920	4	-75	-1980	-15	-1238	multi-exon	FALSE	canonical	1	6944	junction_1	32536.43920625338	NA	1	1	TRUE	NA	NA	NA	C	coding	598	1797	180	1976	25.0	-23	True	TTTAAA	-20
PB.11348.3	chr8	-	2760	11	novel_in_catalog	ST3GAL1	novel	6764	10	NA	NA	-2	-26	combination_of_known_junctions	FALSE	canonical	1	9307	junction_8	75287.46667380967	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	873	1895	90.0	-4	True	NA	NA
PB.11722.12	chr9	-	6797	13	full-splice_match	PTBP3	ENST00000343327.6	2755	13	11	-4053	11	-173	multi-exon	FALSE	canonical	1	71676	junction_11	154407.44877656485	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	196	1554	25.0	51	False	ATTAAA	-13
PB.7053.1	chr2	+	2383	5	novel_not_in_catalog	FBXO36	novel	3120	5	NA	NA	-1	2141	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	20873.38483571843	NA	3	1	TRUE	NA	NA	NA	A	coding	188	567	10	576	70.0	-1	True	NA	NA
PB.1940.1	chr11	-	2664	5	novel_not_in_catalog	TRIM51FP	novel	1353	10	NA	NA	-2172	178	intron_retention	FALSE	canonical	1	1276	junction_1	354.8425707267943	NA	1	NA	TRUE	NA	NA	NA	B	coding	275	828	153	980	20.0	NA	False	ATTAAA	-18
PB.1940.2	chr11	-	2198	6	novel_not_in_catalog	TRIM51FP	novel	1353	10	NA	NA	-2177	168	intron_retention	FALSE	canonical	1	252	junction_1	620.6820119835921	NA	0	NA	TRUE	NA	NA	NA	B	coding	263	792	158	949	40.0	NA	False	ATTAAA	-8
PB.197.10	chr1	+	5026	1	genic	HMGN2	novel	NA	NA	NA	NA	0	1559	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-728	False	NA	NA
PB.504.24	chr1	-	2177	14	full-splice_match	MCOLN2	ENST00000370608.7	2871	14	-226	920	-53	-77	multi-exon	FALSE	canonical	1	61143	junction_2	19942.618865312063	NA	1	NA	TRUE	NA	NA	NA	C	coding	566	1701	295	1995	55.0	-31	False	TATAAA	-5
PB.2157.1	chr11	-	2563	9	novel_not_in_catalog	AP003717.1	novel	1412	7	NA	NA	-200713	28028	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	48554.33708212249	NA	1	NA	TRUE	NA	NA	NA	A	coding	358	1077	536	1612	80.0	-1	True	NA	NA
PB.2157.2	chr11	-	1648	8	full-splice_match	UCP2	ENST00000310473.7	2113	8	460	5	-4	-5	multi-exon	FALSE	canonical	1	673341	junction_7	557365.8168389692	NA	1	NA	TRUE	NA	NA	NA	A	coding	309	930	384	1313	0.0	-5	True	CATAAA	-16
PB.2157.3	chr11	-	7935	33	full-splice_match	C2CD3	ENST00000334126.11	7960	33	18	7	-3	-3	multi-exon	TRUE	canonical	1	53552	junction_25	23552.856534537874	NA	0	NA	TRUE	NA	NA	NA	C	coding	2353	7062	210	7271	25.0	-2	True	AATAAA	-17
PB.1611.12	chr10	-	4589	16	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	21	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	249731.5227751239	NA	2	1	TRUE	NA	NA	NA	C	coding	842	2529	57	2585	5.0	-3	True	AATAAA	-16
PB.1611.13	chr10	-	2982	4	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	-3186	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	442346.2033204309	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-3111	False	AATAAA	-16
PB.2157.6	chr11	-	2178	12	incomplete-splice_match	C2CD3	ENST00000313663.11	6283	31	5	74606	5	-1164	3prime_fragment	FALSE	canonical	1	53552	junction_4	25618.122411054417	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1956	223	2178	40.0	-1	True	AAGAAA	-10
PB.1611.11	chr10	-	5139	16	novel_in_catalog	OGA	novel	5155	16	NA	NA	18	-3	combination_of_known_junctions	FALSE	canonical	1	16864	junction_5	255453.4315802132	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2709	426	3134	10.0	-6	True	AATAAA	-17
PB.5976.10	chr19	-	2647	30	novel_in_catalog	MAP4K1	novel	443	5	NA	NA	-22	0	no_combination_of_known_junctions	FALSE	canonical	1	9402	junction_1	74949.9681449555	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	131	2503	5.0	908	False	AATAAA	-19
PB.5833.2	chr19	+	2751	12	novel_not_in_catalog	PIK3R2	novel	4033	16	NA	NA	64	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	247875.82047595546	NA	0	NA	TRUE	NA	NA	NA	B	coding	253	762	752	1513	10.0	19	True	TATAAA	-13
PB.5976.12	chr19	-	2831	30	novel_in_catalog	MAP4K1	novel	443	5	NA	NA	8	-1	intron_retention	FALSE	canonical	1	183912	junction_13	56886.149488174735	NA	0	NA	TRUE	NA	NA	NA	C	coding	643	1932	794	2725	5.0	938	False	AATAAA	-18
PB.10116.6	chr6	+	4246	1	novel_in_catalog	UFL1	novel	4224	19	NA	NA	32	3121	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	121	366	35	400	90.0	1	True	NA	NA
PB.5976.14	chr19	-	2300	27	novel_not_in_catalog	MAP4K1	novel	443	5	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	77585.98901428947	NA	12	2	TRUE	NA	NA	NA	C	coding	373	1122	74	1195	5.0	-17	True	AATAAA	-16
PB.5976.15	chr19	-	2203	9	novel_not_in_catalog	MAP4K1	novel	2700	32	NA	NA	17	686	intron_retention	TRUE	non_canonical	0	0	junction_5	95863.1052370384	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	92	409	100.0	947	False	NA	NA
PB.6473.1	chr2	-	3545	3	incomplete-splice_match	CCDC88A	ENST00000645969.1	4425	4	1442	-361	732	1	5prime_fragment	FALSE	canonical	1	227199	junction_1	35794.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	3148	False	AATAAA	-20
PB.1611.19	chr10	-	5201	16	novel_not_in_catalog	OGA	novel	5155	16	NA	NA	21	-9	any annotated donor/acceptor	FALSE	canonical	1	554	junction_2	257528.8570829728	NA	3	1	TRUE	NA	NA	NA	C	coding	827	2484	423	2906	15.0	-3	True	AATAAA	-11
PB.9186.7	chr5	-	4362	35	full-splice_match	NUP155	ENST00000231498.7	8143	35	79	3702	1	0	multi-exon	FALSE	canonical	1	221976	junction_34	73699.37499615265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1382	4149	153	4301	30.0	-13	True	AATAAA	-18
PB.2078.1	chr11	+	4260	24	full-splice_match	PACS1	ENST00000320580.8	4392	24	127	5	127	-5	multi-exon	FALSE	canonical	1	265825	junction_1	121339.22135985339	NA	1	NA	TRUE	NA	NA	NA	C	coding	888	2667	132	2798	10.0	-8742	False	AATAAA	-18
PB.2078.2	chr11	+	4229	24	novel_not_in_catalog	PACS1	novel	3024	7	NA	NA	26590	-5	any annotated donor/acceptor	FALSE	canonical	1	942	junction_1	155794.47784918014	NA	2	1	TRUE	NA	NA	NA	C	coding	853	2562	206	2767	10.0	NA	False	AATAAA	-18
PB.2078.3	chr11	+	3692	20	incomplete-splice_match	PACS1	ENST00000320580.8	4392	24	145663	9	-81	-9	5prime_fragment	FALSE	canonical	1	324265	junction_6	104399.8091266656	NA	0	NA	TRUE	NA	NA	NA	C	coding	742	2229	6	2234	10.0	NA	False	AATAAA	-14
PB.9186.3	chr5	-	5011	36	novel_not_in_catalog	NUP155	novel	8143	35	NA	NA	6	-1702	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	93734.51190608853	NA	18	1	TRUE	NA	NA	NA	C	coding	1382	4149	148	4296	35.0	-8	True	TATAAA	-25
PB.1564.6	chr10	-	3425	15	full-splice_match	TM9SF3	ENST00000371142.8	6141	15	150	2566	-143	1602	multi-exon	FALSE	canonical	1	590523	junction_14	236767.59699050494	NA	2	NA	TRUE	NA	NA	NA	C	coding	589	1770	68	1837	35.0	412	False	AATAAA	-20
PB.9186.1	chr5	-	5456	36	novel_not_in_catalog	NUP155	novel	8143	35	NA	NA	8	4	any annotated donor/acceptor	FALSE	canonical	1	13	junction_1	93733.14307919749	NA	3	NA	TRUE	NA	NA	NA	C	coding	1382	4149	146	4294	35.0	-6	True	AATAAA	-19
PB.2078.7	chr11	+	2627	10	incomplete-splice_match	PACS1	ENST00000529757.5	1688	13	2576	-1460	-864	-5	5prime_fragment	FALSE	canonical	1	407489	junction_7	101808.3927848392	NA	0	NA	TRUE	NA	NA	NA	C	coding	344	1035	131	1165	10.0	-8296	False	AATAAA	-18
PB.1018.3	chr1	-	6024	27	full-splice_match	ASPM	ENST00000294732.11	6132	27	-20	128	-20	-124	multi-exon	FALSE	canonical	1	35117	junction_10	80694.94566433952	NA	0	NA	TRUE	NA	NA	NA	C	coding	1892	5679	278	5956	15.0	8595	False	ATTAAA	-24
PB.1018.2	chr1	-	4052	11	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	44021	1	32471	-1	5prime_fragment	FALSE	canonical	1	199066	junction_7	59520.04424301111	NA	0	NA	TRUE	NA	NA	NA	C	coding	1252	3759	99	3857	25.0	NA	False	AATAAA	-18
PB.1564.9	chr10	-	3113	15	full-splice_match	TM9SF3	ENST00000371142.8	6141	15	149	2879	-144	1289	multi-exon	FALSE	canonical	1	590523	junction_14	236767.59699050494	NA	2	NA	TRUE	NA	NA	NA	C	coding	589	1770	69	1838	35.0	411	False	AATAAA	-12
PB.5833.1	chr19	+	2766	12	novel_not_in_catalog	PIK3R2	novel	4033	16	NA	NA	34	-1	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	247875.82047595546	NA	0	NA	TRUE	NA	NA	NA	B	coding	253	762	760	1521	15.0	-7727	False	TATAAA	-20
PB.1018.7	chr1	-	4270	17	incomplete-splice_match	ASPM	ENST00000367409.8	10887	28	0	33713	0	-33709	3prime_fragment	FALSE	canonical	1	118067	junction_3	20958.959641310772	NA	0	NA	TRUE	NA	NA	NA	C	coding	1337	4011	258	4268	65.0	-1	True	NA	NA
PB.1344.1	chr10	+	2443	7	full-splice_match	RAB18	ENST00000356940.10	4886	7	58	2385	-2	1340	multi-exon	FALSE	canonical	1	589639	junction_1	178127.847109332	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	45	665	30.0	-15	False	AATAAA	-20
PB.9186.9	chr5	-	4203	34	novel_in_catalog	NUP155	novel	8143	35	NA	NA	7	0	no_combination_of_known_junctions	FALSE	canonical	1	3272	junction_24	94281.94071521137	NA	2	1	TRUE	NA	NA	NA	C	coding	1331	3996	147	4142	30.0	-7	True	AATAAA	-18
PB.9186.8	chr5	-	4237	34	novel_in_catalog	NUP155	novel	8143	35	NA	NA	-11	0	no_combination_of_known_junctions	FALSE	canonical	1	24653	junction_2	91594.39312841142	NA	0	NA	TRUE	NA	NA	NA	C	coding	1280	3843	165	4007	30.0	349	False	AATAAA	-18
PB.6654.3	chr2	-	4302	23	full-splice_match	REV1	ENST00000393445.7	4686	23	-78	462	-16	13	multi-exon	FALSE	canonical	1	56940	junction_15	67046.23247747449	NA	0	NA	TRUE	NA	NA	NA	C	coding	1250	3753	246	3998	15.0	-52	True	AATAAA	-26
PB.3376.3	chr14	-	1806	5	full-splice_match	EGLN3	ENST00000553215.5	1004	5	-252	-550	3	550	multi-exon	FALSE	canonical	1	12108	junction_4	99583.83657595995	NA	1	NA	TRUE	NA	NA	NA	C	coding	145	438	327	764	10.0	-5	True	AATAAA	-15
PB.7459.4	chr21	-	2595	3	incomplete-splice_match	SAMSN1	ENST00000400566.5	1888	8	-42	29472	-25	6473	3prime_fragment	FALSE	canonical	1	257594	junction_1	30224.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	3748	False	NA	NA
PB.4948.11	chr17	-	4565	16	full-splice_match	MED1	ENST00000577831.5	4584	16	10	9	6	-9	multi-exon	FALSE	canonical	1	9722	junction_12	79465.78209837657	NA	0	NA	TRUE	NA	NA	NA	C	coding	1327	3981	584	4564	75.0	-1	True	AATACA	-22
PB.7459.6	chr21	-	1658	1	novel_in_catalog	SAMSN1	novel	1382	4	NA	NA	10	-23501	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-17	True	AATACA	-36
PB.11211.10	chr8	-	1760	7	full-splice_match	ZFAND1	ENST00000522520.5	1705	7	-13	-42	-2	0	multi-exon	FALSE	canonical	1	196288	junction_5	121971.46562026528	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	303	788	10.0	-3	True	AATAAA	-13
PB.11211.11	chr8	-	2882	9	novel_not_in_catalog	ZFAND1	novel	2719	4	NA	NA	0	23	any annotated donor/acceptor	FALSE	canonical	1	1849	junction_8	221947.7993187531	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	4	True	TTTAAA	-38
PB.7459.2	chr21	-	1859	8	full-splice_match	SAMSN1	ENST00000400566.5	1888	8	28	1	-2	0	multi-exon	TRUE	canonical	1	212460	junction_1	43851.84993468209	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	55	1176	30.0	-1	True	AATAAA	-21
PB.7459.3	chr21	-	1394	8	full-splice_match	SAMSN1	ENST00000400566.5	1888	8	12	482	10	-481	multi-exon	FALSE	canonical	1	212460	junction_1	43851.84993468209	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	71	1192	35.0	-17	True	AATAAA	-19
PB.1222.10	chr1	+	4334	8	novel_not_in_catalog	GPR137B	novel	1107	5	NA	NA	0	2145	any annotated donor/acceptor	FALSE	canonical	1	7590	junction_1	98632.50760519979	NA	4	NA	TRUE	NA	NA	NA	C	coding	181	546	893	1438	35.0	-21	True	ATTAAA	-17
PB.8111.16	chr3	-	2208	15	novel_not_in_catalog	USP4	novel	3222	21	NA	NA	404	-2	any annotated donor/acceptor	FALSE	canonical	1	377	junction_14	158845.92159123372	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	104	1921	90.0	-8465	False	NA	NA
PB.8111.3	chr3	-	3423	21	full-splice_match	USP4	ENST00000351842.8	3222	21	-3	-198	0	198	multi-exon	FALSE	canonical	1	82756	junction_15	111562.44106064549	NA	1	NA	TRUE	NA	NA	NA	C	coding	916	2751	13	2763	30.0	16	True	NA	NA
PB.1222.11	chr1	+	3365	6	novel_in_catalog	GPR137B	novel	1107	5	NA	NA	0	1373	combination_of_known_junctions	FALSE	canonical	1	5154	junction_1	92027.84075919635	NA	4	NA	TRUE	NA	NA	NA	C	coding	181	546	696	1241	20.0	-21	True	AATACA	-23
PB.11547.1	chr9	-	4696	11	full-splice_match	FBXO10	ENST00000432825.6	4575	11	-122	1	-26	-1	multi-exon	FALSE	canonical	1	27151	junction_10	21420.954689509053	NA	0	NA	TRUE	NA	NA	NA	C	coding	956	2871	172	3042	15.0	4	True	AATAAA	-22
PB.3305.10	chr14	+	3749	6	novel_not_in_catalog	TOX4	novel	724	4	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_3	130300.93877328743	NA	3	1	TRUE	NA	NA	NA	C	coding	236	711	474	1184	35.0	22	True	AATAAA	-23
PB.3305.11	chr14	+	4429	8	incomplete-splice_match	TOX4	ENST00000448790.6	4534	9	318	-2	230	2	5prime_fragment	FALSE	canonical	1	52098	junction_7	176612.41390152177	NA	7	1	TRUE	NA	NA	NA	C	coding	538	1617	246	1862	30.0	288	False	AATAAA	-25
PB.104.2	chr1	+	6335	9	novel_in_catalog	PRDM2	novel	628	6	NA	NA	-10	-22	combination_of_known_junctions	FALSE	canonical	1	4425	junction_1	67185.84662605193	NA	6	NA	TRUE	NA	NA	NA	C	coding	1682	5049	179	5227	70.0	0	True	TATAAA	-17
PB.4515.1	chr16	+	3585	1	incomplete-splice_match	SNTB2	ENST00000336278.8	9789	7	114573	3766	114060	-3766	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-9654	False	ATTAAA	-45
PB.11547.6	chr9	-	2689	3	incomplete-splice_match	FBXO10	ENST00000276960.7	3654	9	-63	21028	-37	5534	3prime_fragment	FALSE	canonical	1	27151	junction_2	30379.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	534	1605	9	1613	65.0	-7	True	NA	NA
PB.8915.4	chr4	+	3212	12	full-splice_match	GSTCD	ENST00000515279.5	4273	12	-27	1088	4	662	multi-exon	FALSE	canonical	1	81601	junction_1	11446.180959690593	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	248	2149	65.0	-9	True	NA	NA
PB.802.8	chr1	+	1346	11	full-splice_match	FDPS	ENST00000368356.8	1431	11	85	0	21	0	multi-exon	FALSE	canonical	1	48841	junction_1	628828.2299967854	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	31	1290	0.0	71	True	AATAAA	-16
PB.9416.6	chr5	+	2935	12	novel_in_catalog	CSNK1G3	novel	4635	13	NA	NA	-32	-5	no_combination_of_known_junctions	TRUE	canonical	1	4641	junction_2	99023.97781328995	NA	3	NA	TRUE	NA	NA	NA	C	coding	348	1047	844	1890	20.0	0	True	AATAAA	-15
PB.8078.1	chr3	-	2112	1	full-splice_match	AC099778.1	ENST00000568593.1	1911	1	-497	296	-497	-296	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	105	318	803	1120	90.0	-5	True	NA	NA
PB.8915.1	chr4	+	4818	12	full-splice_match	GSTCD	ENST00000515279.5	4273	12	-42	-503	-2	503	multi-exon	FALSE	canonical	1	81601	junction_1	11446.180959690593	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	263	2164	25.0	-24	True	NA	NA
PB.8915.2	chr4	+	1566	3	incomplete-splice_match	GSTCD	ENST00000484843.1	2228	6	-6	103748	3	383	3prime_fragment	FALSE	canonical	1	81601	junction_1	9526.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	258	1253	90.0	-19	True	NA	NA
PB.8915.3	chr4	+	4308	12	full-splice_match	GSTCD	ENST00000515279.5	4273	12	-37	2	3	1	multi-exon	FALSE	canonical	1	81601	junction_1	11446.180959690593	NA	1	NA	TRUE	NA	NA	NA	C	coding	633	1902	258	2159	30.0	-19	True	NA	NA
PB.10986.36	chr8	-	3235	9	novel_in_catalog	CTSB	novel	660	4	NA	NA	0	5	intron_retention	FALSE	canonical	1	1896089	junction_8	1286885.7556936387	NA	1	NA	TRUE	NA	NA	NA	C	coding	267	804	144	947	25.0	-32	False	AATAAA	-22
PB.1222.14	chr1	+	1814	6	novel_in_catalog	GPR137B	novel	1107	5	NA	NA	2	-3	no_combination_of_known_junctions	FALSE	canonical	1	7969	junction_2	87235.00080495213	NA	2	NA	TRUE	NA	NA	NA	C	coding	146	441	135	575	20.0	-19	True	ATTAAA	-45
PB.10986.34	chr8	-	2053	11	novel_in_catalog	CTSB	novel	660	4	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	8980	junction_10	2084761.4150948904	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	223	1242	25.0	-3	True	AATAAA	-23
PB.504.29	chr1	-	2054	1	novel_in_catalog	MCOLN2	novel	2403	12	NA	NA	0	-29511	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-5	True	NA	NA
PB.10986.32	chr8	-	2188	13	novel_in_catalog	CTSB	novel	660	4	NA	NA	0	6	no_combination_of_known_junctions	FALSE	canonical	1	449	junction_10	2427829.744188624	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	358	1377	25.0	-1	True	AATAAA	-23
PB.10986.33	chr8	-	1936	10	full-splice_match	CTSB	ENST00000353047.10	3875	10	143	1796	1	0	multi-exon	FALSE	canonical	1	1896089	junction_9	1213328.8144925926	NA	12	NA	TRUE	NA	NA	NA	C	coding	339	1020	112	1131	25.0	0	True	AATAAA	-17
PB.7517.2	chr21	+	2508	26	full-splice_match	TTC3	ENST00000450533.5	2451	26	-46	-11	-5	2	multi-exon	FALSE	canonical	1	11239	junction_7	86205.94227430962	NA	5	NA	TRUE	NA	NA	NA	C	coding	784	2352	156	2507	50.0	-7	True	AAAAAG	-19
PB.1222.15	chr1	+	1575	7	full-splice_match	GPR137B	ENST00000366592.7	2042	7	8	459	-4	-32	multi-exon	FALSE	canonical	1	179295	junction_2	26349.71644639759	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	129	1283	10.0	-13	True	TATAAA	-42
PB.386.3	chr1	+	3131	18	novel_not_in_catalog	RAD54L	novel	718	7	NA	NA	8	0	intron_retention	FALSE	canonical	1	4693	junction_13	58722.96994960679	NA	3	NA	TRUE	NA	NA	NA	C	coding	757	2274	667	2940	20.0	-23	True	AATAAA	-15
PB.266.5	chr1	-	5085	6	full-splice_match	AK2	ENST00000354858.10	1021	6	102	-4166	-4	-894	multi-exon	FALSE	canonical	1	632	junction_3	268655.53988525906	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	63	782	5.0	-12	True	AATAAA	-20
PB.11998.6	chrX	-	2927	22	full-splice_match	RPS6KA3	ENST00000379565.8	7960	22	219	4814	-4	26	multi-exon	FALSE	canonical	1	229967	junction_21	96174.69208015181	NA	5	NA	TRUE	NA	NA	NA	C	coding	740	2223	32	2254	5.0	365	False	NA	NA
PB.11998.7	chrX	-	2776	22	full-splice_match	RPS6KA3	ENST00000646610.1	2682	22	21	-115	10	18	multi-exon	FALSE	canonical	1	8390	junction_21	124876.16056387466	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	57	2195	30.0	-51	False	ATTAAA	-22
PB.11233.8	chr8	-	3546	5	full-splice_match	TRIQK	ENST00000521988.5	3672	5	23	103	1	2	multi-exon	FALSE	canonical	1	109797	junction_3	47382.331476907086	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	NA	NA
PB.11998.2	chrX	-	7694	22	full-splice_match	RPS6KA3	ENST00000646610.1	2682	22	3	-5015	-3	-6	multi-exon	FALSE	canonical	1	8390	junction_21	124876.16056387466	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	75	2213	15.0	-69	False	AATAAA	-11
PB.11998.3	chrX	-	3976	22	full-splice_match	RPS6KA3	ENST00000646610.1	2682	22	7	-1301	1	31	multi-exon	FALSE	canonical	1	8390	junction_21	124876.16056387466	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	71	2209	80.0	-65	False	NA	NA
PB.3203.1	chr13	-	4420	22	incomplete-splice_match	MYCBP2	ENST00000544440.6	14664	83	148787	52884	-27114	529	internal_fragment	FALSE	canonical	1	116471	junction_4	32886.30899452608	NA	2	NA	TRUE	NA	NA	NA	B	coding	1359	4077	344	4420	85.0	NA	False	NA	NA
PB.8613.11	chr3	+	2015	13	novel_in_catalog	MUC20-OT1	novel	1279	6	NA	NA	3	-20	no_combination_of_known_junctions	FALSE	canonical	1	776	junction_1	43295.76227619036	NA	1	NA	TRUE	NA	NA	NA	C	coding	150	453	1347	1799	70.0	0	True	GATAAA	-19
PB.11998.8	chrX	-	2894	24	novel_in_catalog	RPS6KA3	novel	7960	22	NA	NA	-6	12	combination_of_known_junctions	FALSE	canonical	1	1383	junction_23	162298.32650170857	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	181	2319	30.0	-44	False	ATTAAA	-16
PB.4509.3	chr16	+	2805	5	full-splice_match	ZFP90	ENST00000570495.5	4636	5	64	1767	-7	296	multi-exon	FALSE	canonical	1	31195	junction_1	27691.61030890042	NA	1	NA	TRUE	NA	NA	NA	C	coding	636	1911	229	2139	50.0	-468	False	AATAAA	-14
PB.4509.2	chr16	+	3415	5	full-splice_match	ZFP90	ENST00000570495.5	4636	5	51	1170	-20	0	multi-exon	FALSE	canonical	1	31195	junction_1	27691.61030890042	NA	5	1	TRUE	NA	NA	NA	C	coding	636	1911	242	2152	85.0	-481	False	NA	NA
PB.4509.1	chr16	+	4598	5	full-splice_match	ZFP90	ENST00000563169.6	2512	5	-25	-2061	-25	-2	multi-exon	TRUE	canonical	1	16143	junction_1	33545.93946366684	NA	4	1	TRUE	NA	NA	NA	C	coding	636	1911	257	2167	20.0	-486	False	AATAAA	-16
PB.2769.41	chr12	-	1609	2	full-splice_match	PHLDA1	ENST00000602540.5	5741	2	9	4123	9	-4123	multi-exon	FALSE	canonical	1	1143880	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	260	783	278	1060	15.0	-1	True	ATTAAA	-11
PB.1512.8	chr10	-	2386	13	full-splice_match	GLUD1	ENST00000277865.4	3039	13	-13	666	-13	-666	multi-exon	FALSE	canonical	1	593	junction_12	167908.83891134366	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	111	1787	40.0	499	False	AATAAA	-27
PB.1512.9	chr10	-	2073	13	full-splice_match	GLUD1	ENST00000277865.4	3039	13	-29	995	-29	-995	multi-exon	FALSE	canonical	1	593	junction_12	167908.83891134366	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	127	1803	5.0	-7	True	AATAAA	-19
PB.4509.5	chr16	+	3357	4	full-splice_match	ZFP90	ENST00000398253.6	4384	4	-148	1175	-93	0	multi-exon	FALSE	canonical	1	65571	junction_1	15452.173719793169	NA	3	NA	TRUE	NA	NA	NA	C	coding	636	1911	184	2094	85.0	-135	False	NA	NA
PB.4509.4	chr16	+	4631	5	full-splice_match	ZFP90	ENST00000564558.5	4664	5	27	6	1	-2	multi-exon	FALSE	canonical	1	16143	junction_1	30731.29775469139	NA	4	NA	TRUE	NA	NA	NA	C	coding	224	675	1526	2200	20.0	33	True	AATAAA	-16
PB.3382.3	chr14	-	5719	27	full-splice_match	BAZ1A	ENST00000360310.5	6010	27	291	0	291	0	multi-exon	TRUE	canonical	1	169898	junction_26	101798.62240898382	NA	0	NA	TRUE	NA	NA	NA	C	coding	1556	4671	278	4948	40.0	3	True	AATAAA	-14
PB.10696.19	chr7	+	1415	10	novel_not_in_catalog	AC004922.1	novel	2430	17	NA	NA	48816	126	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1068037.471131231	NA	1	NA	TRUE	NA	NA	NA	B	coding	347	1044	82	1125	100.0	4	True	AATAAA	-13
PB.1512.6	chr10	-	2650	13	full-splice_match	GLUD1	ENST00000277865.4	3039	13	-57	446	-57	-446	multi-exon	FALSE	canonical	1	593	junction_12	167908.83891134366	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	155	1831	35.0	1	True	ATTAAA	-39
PB.1512.7	chr10	-	2650	13	full-splice_match	GLUD1	ENST00000277865.4	3039	13	-122	511	-122	-511	multi-exon	FALSE	canonical	1	593	junction_12	167908.83891134366	NA	2	NA	TRUE	NA	NA	NA	C	coding	558	1677	220	1896	30.0	390	False	ATTAAA	-36
PB.7517.1	chr21	+	3702	33	incomplete-splice_match	TTC3	ENST00000355666.5	7712	46	-63	37355	-18	-3	3prime_fragment	FALSE	canonical	1	11239	junction_7	91682.24335646474	NA	0	NA	TRUE	NA	NA	NA	C	coding	1178	3534	169	3702	75.0	-7930	False	NA	NA
PB.1512.1	chr10	-	3278	13	full-splice_match	GLUD1	ENST00000277865.4	3039	13	-24	-215	-24	215	multi-exon	TRUE	canonical	1	593	junction_12	167908.83891134366	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	122	1798	45.0	-2	True	NA	NA
PB.1512.2	chr10	-	3313	14	novel_not_in_catalog	GLUD1	novel	3039	13	NA	NA	-44	3	any annotated donor/acceptor	FALSE	canonical	1	4012	junction_13	169028.71245144738	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	870	2045	5.0	14	True	ATTAAA	-22
PB.1512.3	chr10	-	2741	13	full-splice_match	GLUD1	ENST00000277865.4	3039	13	294	4	294	-4	multi-exon	FALSE	canonical	1	593	junction_12	167908.83891134366	NA	7	NA	TRUE	NA	NA	NA	C	coding	490	1473	8	1480	25.0	806	False	ATTAAA	-15
PB.8280.9	chr3	+	3403	16	full-splice_match	ALCAM	ENST00000306107.9	4701	16	0	1298	0	-312	multi-exon	FALSE	canonical	1	442440	junction_1	97004.90393835196	NA	0	NA	TRUE	NA	NA	NA	C	coding	532	1599	654	2252	35.0	0	True	AATAAA	-23
PB.885.1	chr1	+	2982	10	full-splice_match	NOS1AP	ENST00000361897.9	4931	10	-88	2037	-86	-13	multi-exon	FALSE	canonical	1	20939	junction_3	10641.326805095288	NA	2	1	TRUE	NA	NA	NA	C	coding	506	1521	491	2011	95.0	-52	True	NA	NA
PB.780.40	chr1	-	6207	15	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	1	2649	junction_14	356940.49132610665	NA	2	NA	TRUE	NA	NA	NA	C	coding	1100	3303	192	3494	85.0	-12	True	AATATA	-11
PB.8280.8	chr3	+	1749	10	incomplete-splice_match	ALCAM	ENST00000306107.9	4701	16	-8	29615	-8	1975	3prime_fragment	FALSE	canonical	1	442440	junction_1	89081.26481512107	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1239	509	1747	40.0	-8	True	ACTAAA	-34
PB.6626.4	chr2	-	2712	40	novel_not_in_catalog	ANKRD36C	novel	5428	67	NA	NA	-68	11248	any annotated donor/acceptor	FALSE	canonical	1	2458	junction_38	29256.967193782082	NA	0	NA	TRUE	NA	NA	NA	B	coding	840	2520	192	2711	65.0	-76	False	AATATA	-8
PB.6626.3	chr2	-	2867	43	novel_not_in_catalog	ANKRD36C	novel	5428	67	NA	NA	-96	14980	any annotated donor/acceptor	FALSE	canonical	1	2458	junction_41	29654.250123329442	NA	0	NA	TRUE	NA	NA	NA	B	coding	532	1599	220	1818	60.0	-104	False	AATATA	-4
PB.6626.2	chr2	-	3265	51	novel_not_in_catalog	ANKRD36C	novel	5428	67	NA	NA	-82	22467	any annotated donor/acceptor	FALSE	canonical	1	885	junction_2	31188.124543864444	NA	0	NA	TRUE	NA	NA	NA	B	coding	970	2913	206	3118	70.0	-90	False	AATATA	-8
PB.6626.1	chr2	-	3689	61	novel_not_in_catalog	ANKRD36C	novel	5428	67	NA	NA	-2	33691	any annotated donor/acceptor	FALSE	canonical	1	479	junction_8	34658.82848712576	NA	0	NA	TRUE	NA	NA	NA	B	coding	505	1518	1723	3240	60.0	-10	False	AATATA	-4
PB.11233.3	chr8	-	3722	6	novel_in_catalog	TRIQK	novel	3672	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	22472	junction_3	85600.07788174028	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-20
PB.5011.10	chr17	-	2702	8	novel_not_in_catalog	BRCA1	novel	3668	22	NA	NA	0	193	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	43185.49069456792	NA	14	2	TRUE	NA	NA	NA	C	coding	862	2586	115	2700	65.0	-7	True	AAGAAA	-30
PB.5011.11	chr17	-	2915	10	full-splice_match	BRCA1	ENST00000470026.5	2108	10	-44	-763	-3	192	multi-exon	FALSE	canonical	1	4780	junction_9	33293.17851979016	NA	0	NA	TRUE	NA	NA	NA	C	coding	903	2709	206	2914	70.0	-4	True	AAGAAA	-29
PB.3301.31	chr14	-	1878	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	233847	junction_5	831677.1459695162	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	192	1097	50.0	15	True	AATAAA	-30
PB.11226.4	chr8	-	4381	15	novel_not_in_catalog	NBN	novel	4666	16	NA	NA	-8	1	any annotated donor/acceptor	FALSE	canonical	1	12241	junction_14	142518.72840417808	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	116	2134	45.0	-11	True	NA	NA
PB.10645.10	chr7	+	3746	18	novel_not_in_catalog	DMTF1	novel	3801	18	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	4430	junction_13	113211.29971547202	NA	3	NA	TRUE	NA	NA	NA	C	coding	767	2304	260	2563	30.0	-25	True	AATAAA	-15
PB.11226.7	chr8	-	4515	16	full-splice_match	NBN	ENST00000265433.7	4666	16	0	151	0	-3	multi-exon	FALSE	canonical	1	198817	junction_14	118152.53893110662	NA	47	3	TRUE	NA	NA	NA	C	coding	754	2265	156	2420	15.0	-50	False	NA	NA
PB.688.1	chr1	-	2577	22	incomplete-splice_match	NBPF10	ENST00000617010.2	11630	91	24739	37146	24739	-37146	internal_fragment	FALSE	canonical	0	0	junction_1	821.1693448799227	NA	2	NA	TRUE	NA	NA	NA	B	coding	655	1965	611	2575	60.0	NA	False	AAGAAA	-18
PB.11226.1	chr8	-	4675	17	incomplete-splice_match	NBN	ENST00000396252.6	4907	19	18564	-11	1	11	5prime_fragment	TRUE	canonical	1	46834	junction_15	160483.18357030238	NA	4	NA	TRUE	NA	NA	NA	C	coding	672	2019	400	2418	40.0	2	True	NA	NA
PB.11226.2	chr8	-	4630	16	full-splice_match	NBN	ENST00000265433.7	4666	16	46	-10	-5	10	multi-exon	FALSE	canonical	1	198817	junction_14	118152.53893110662	NA	1	NA	TRUE	NA	NA	NA	C	coding	754	2265	110	2374	40.0	-4	True	NA	NA
PB.10935.9	chr7	-	2504	15	full-splice_match	ABCF2	ENST00000287844.6	3546	15	25	1017	25	-1017	multi-exon	FALSE	canonical	1	198250	junction_7	165357.9553995618	NA	0	NA	TRUE	NA	NA	NA	C	coding	623	1872	86	1957	5.0	-14	True	AATAAA	-18
PB.11542.1	chr9	+	2627	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	-22	1915	-22	768	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-146	False	TATAAA	-24
PB.5648.9	chr19	-	2381	21	novel_not_in_catalog	KHSRP	novel	2993	20	NA	NA	-15	124	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	661355.7215244664	NA	2	NA	TRUE	NA	NA	NA	B	coding	567	1704	407	2110	85.0	1	True	NA	NA
PB.519.4	chr1	+	3715	19	incomplete-splice_match	PKN2	ENST00000370521.7	6121	22	17	6821	17	267	3prime_fragment	FALSE	canonical	1	161215	junction_1	59540.71729238201	NA	1	NA	TRUE	NA	NA	NA	C	coding	859	2580	343	2922	60.0	-34	True	AATAAA	-11
PB.5487.3	chr18	+	4293	10	novel_not_in_catalog	POLI	novel	6133	10	NA	NA	-11	5	intron_retention	FALSE	canonical	1	7495	junction_5	61761.903254192606	NA	1	NA	TRUE	NA	NA	NA	C	coding	336	1011	3021	4031	30.0	-84	True	AATAAA	-23
PB.1255.2	chr1	-	1721	4	novel_not_in_catalog	LYPD8	novel	1233	3	NA	NA	14154	196	any annotated donor/acceptor	FALSE	canonical	1	527	junction_1	1848.7358443602002	NA	4	1	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-30	False	NA	NA
PB.10096.8	chr6	-	1798	20	full-splice_match	RARS2	ENST00000369536.9	1818	20	13	7	13	-7	multi-exon	FALSE	canonical	1	123437	junction_19	122553.21535647495	NA	1	NA	TRUE	NA	NA	NA	C	coding	578	1737	34	1770	35.0	-14	True	ATTAAA	-18
PB.5211.4	chr17	-	3582	28	novel_in_catalog	ABCA6	novel	5300	39	NA	NA	-4	-4	no_combination_of_known_junctions	FALSE	canonical	1	6691	junction_24	27511.072603983903	NA	3	1	TRUE	NA	NA	NA	B	coding	932	2799	517	3315	50.0	-3	True	NA	NA
PB.10935.4	chr7	-	3547	15	full-splice_match	ABCF2	ENST00000287844.6	3546	15	0	-1	0	1	multi-exon	FALSE	canonical	1	198250	junction_7	165357.9553995618	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	111	1982	35.0	-39	True	NA	NA
PB.5211.6	chr17	-	3560	30	novel_not_in_catalog	ABCA6	novel	5300	39	NA	NA	-285	33	any annotated donor/acceptor	FALSE	canonical	1	111	junction_29	27086.497377357653	NA	4	NA	TRUE	NA	NA	NA	B	coding	1070	3213	259	3471	50.0	290	False	TTTAAA	-9
PB.1255.3	chr1	-	3971	3	novel_not_in_catalog	LYPD8	novel	1233	3	NA	NA	14170	0	intron_retention	FALSE	canonical	1	3934	junction_2	440.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-14	False	NA	NA
PB.10935.5	chr7	-	3478	15	novel_not_in_catalog	AC021097.2	novel	2185	16	NA	NA	-49	-4652	any annotated donor/acceptor	FALSE	canonical	1	7214	junction_4	200766.79868190255	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	96	1913	35.0	-24	True	NA	NA
PB.6147.2	chr19	-	1700	11	full-splice_match	FUZ	ENST00000377092.8	1632	11	-18	-50	-5	-1	multi-exon	FALSE	canonical	1	29763	junction_9	72044.72324528702	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	463	1419	15.0	-15	True	AATAAA	-37
PB.6147.1	chr19	-	1711	11	full-splice_match	FUZ	ENST00000313777.8	1675	11	-57	21	-18	2	multi-exon	FALSE	canonical	1	111879	junction_10	49373.51546730291	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	222	1478	80.0	6898	False	NA	NA
PB.3301.37	chr14	-	1675	8	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_7	623843.0678558806	NA	4	1	TRUE	NA	NA	NA	C	coding	293	882	127	1008	50.0	14	True	AATAAA	-30
PB.10935.6	chr7	-	3334	14	novel_in_catalog	AC021097.2	novel	2185	16	NA	NA	-57	-4654	no_combination_of_known_junctions	FALSE	canonical	1	4598	junction_1	205029.29441259228	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	104	1771	35.0	-32	True	NA	NA
PB.8229.1	chr3	-	2670	1	incomplete-splice_match	RYBP	ENST00000477973.3	7215	4	69326	2801	69326	-2801	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	2088	False	AATAGA	-38
PB.10607.8	chr7	+	4611	33	incomplete-splice_match	GTF2I	ENST00000614986.4	4415	34	-77	573	-4	160	intron_retention	FALSE	canonical	1	3722	junction_22	541862.6255438237	NA	2	NA	TRUE	NA	NA	NA	C	coding	978	2937	394	3330	35.0	-4861	False	ATTAAA	-23
PB.4151.1	chr16	-	5231	31	full-splice_match	IFT140	ENST00000426508.6	5270	31	38	1	38	-1	multi-exon	FALSE	canonical	1	8683	junction_30	28476.385450326303	NA	0	NA	TRUE	NA	NA	NA	C	coding	1462	4389	327	4715	10.0	-21	True	AATAAA	-18
PB.4151.3	chr16	-	2986	19	full-splice_match	IFT140	ENST00000439987.6	2580	19	-25	-381	-14	381	multi-exon	FALSE	canonical	1	9499	junction_1	30810.271853627717	NA	0	NA	TRUE	NA	NA	NA	C	coding	801	2406	87	2492	25.0	-18	True	ATTAAA	-20
PB.11542.7	chr9	+	1926	3	full-splice_match	EBLN3P	ENST00000629870.1	958	3	-129	-839	-24	22	multi-exon	FALSE	canonical	1	9870	junction_1	7285.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	10	True	ATTAAA	-20
PB.8900.8	chr4	-	2252	13	full-splice_match	PPP3CA	ENST00000394853.8	3604	13	-253	1605	-20	-615	multi-exon	FALSE	canonical	1	441508	junction_12	113426.6841204289	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1467	785	2251	30.0	-1	True	NA	NA
PB.8900.6	chr4	-	2505	13	full-splice_match	PPP3CA	ENST00000394853.8	3604	13	106	993	106	-3	multi-exon	FALSE	canonical	1	441508	junction_12	113426.6841204289	NA	2	NA	TRUE	NA	NA	NA	C	coding	511	1536	426	1961	85.0	414	False	TATAAA	-17
PB.10607.1	chr7	+	4665	34	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-7436	-3	any annotated donor/acceptor	TRUE	canonical	1	3722	junction_22	545176.2125478584	NA	0	NA	TRUE	NA	NA	NA	C	coding	1139	3420	89	3508	20.0	0	True	AATAAA	-22
PB.10607.2	chr7	+	3785	34	full-splice_match	GTF2I	ENST00000614986.4	4415	34	53	577	53	156	multi-exon	FALSE	canonical	1	3722	junction_22	539596.0995220877	NA	3	1	TRUE	NA	NA	NA	C	coding	978	2937	264	3200	35.0	-29	True	ATTAAA	-19
PB.10607.3	chr7	+	4419	34	novel_not_in_catalog	GTF2I	novel	538	2	NA	NA	-96	-5	any annotated donor/acceptor	FALSE	canonical	1	3722	junction_22	553790.8651747509	NA	1	NA	TRUE	NA	NA	NA	C	coding	957	2874	391	3264	25.0	-12	True	AATAAA	-20
PB.10607.4	chr7	+	2406	16	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-85	23500	6	-927	3prime_fragment	FALSE	canonical	1	7040	junction_15	497553.81279895967	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	402	1901	85.0	-4869	False	NA	NA
PB.10607.5	chr7	+	3539	32	incomplete-splice_match	GTF2I	ENST00000620879.4	4352	33	-82	1587	9	-854	3prime_fragment	FALSE	canonical	1	3722	junction_21	553993.6477799553	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	399	3272	35.0	-4866	False	AAAAAG	-15
PB.9416.17	chr5	+	4247	13	novel_not_in_catalog	CSNK1G3	novel	4635	13	NA	NA	-26	-307	any annotated donor/acceptor	FALSE	canonical	1	14395	junction_2	100916.92880075368	NA	2	NA	TRUE	NA	NA	NA	C	coding	441	1326	585	1910	85.0	-34	True	AATGAA	-30
PB.10607.7	chr7	+	5243	34	incomplete-splice_match	GTF2I	ENST00000573035.5	4548	35	-5	2	-5	0	intron_retention	FALSE	canonical	1	3722	junction_23	526525.8021385502	NA	11	1	TRUE	NA	NA	NA	C	coding	998	2997	395	3391	15.0	-4862	False	AATAAA	-25
PB.7740.1	chr22	-	2825	6	novel_not_in_catalog	APOL2	novel	2551	5	NA	NA	1	-413	any annotated donor/acceptor	FALSE	canonical	1	18035	junction_5	170311.0973337909	NA	4	NA	TRUE	NA	NA	NA	C	coding	337	1014	1031	2044	5.0	0	True	AATAAA	-15
PB.8280.7	chr3	+	3911	15	full-splice_match	ALCAM	ENST00000472644.6	4189	15	-460	738	-26	209	multi-exon	FALSE	canonical	1	125743	junction_12	162493.09560567583	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	680	2239	65.0	-2427	False	TATAAA	-11
PB.7740.3	chr22	-	2103	1	novel_in_catalog	APOL2	novel	2551	5	NA	NA	-2	-463	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	102	309	478	786	70.0	-3	True	NA	NA
PB.7740.2	chr22	-	2047	5	full-splice_match	APOL2	ENST00000358502.9	2551	5	84	420	2	-413	multi-exon	FALSE	canonical	1	289165	junction_4	37817.42954230893	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	253	1266	5.0	10	True	AATAAA	-15
PB.10786.1	chr7	+	1851	3	novel_not_in_catalog	DNAJB9	novel	2715	3	NA	NA	-5	-359	any annotated donor/acceptor	FALSE	canonical	1	3244	junction_1	241268.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	132	803	15.0	-12	True	TATAAA	-14
PB.10786.2	chr7	+	2395	3	full-splice_match	DNAJB9	ENST00000249356.3	2715	3	318	2	19	-2	multi-exon	FALSE	canonical	1	269224	junction_1	108278.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	223	672	229	900	25.0	12	True	AATAAA	-16
PB.10786.3	chr7	+	1840	3	full-splice_match	DNAJB9	ENST00000249356.3	2715	3	426	449	127	-359	multi-exon	FALSE	canonical	1	269224	junction_1	108278.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	121	792	15.0	-3514	False	TATAAA	-14
PB.10786.4	chr7	+	4478	1	novel_in_catalog	DNAJB9	novel	2715	3	NA	NA	57	-359	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	9	NA	NA	NA	NA	NA	C	coding	156	471	3015	3485	15.0	-3584	False	TATAAA	-14
PB.6678.5	chr2	+	2927	7	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	635	36511	5	-12	3prime_fragment	FALSE	canonical	1	157152	junction_1	37563.75352946271	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2847	80	2926	60.0	-26	True	AGTAAA	-9
PB.7443.1	chr21	+	3417	1	genic	CU633906.2	novel	NA	NA	NA	NA	-31	102	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	B	coding	112	339	200	538	20.0	NA	False	ATTAAA	-14
PB.10258.1	chr6	-	699	1	full-splice_match	SF3B5	ENST00000367569.3	693	1	-8	2	-8	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	34	False	CATAAA	-18
PB.519.9	chr1	+	3511	22	novel_not_in_catalog	PKN2	novel	2632	11	NA	NA	47	221	any annotated donor/acceptor	FALSE	canonical	1	24939	junction_7	88657.86381290991	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	313	3219	80.0	-4	True	NA	NA
PB.183.1	chr1	+	2194	6	full-splice_match	TMEM50A	ENST00000498135.5	776	6	-27	-1391	-27	-3	multi-exon	FALSE	canonical	1	60666	junction_2	665349.0742349913	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-2249	False	ATTAAA	-14
PB.6767.1	chr2	+	2452	1	antisense	novelGene_ZEB2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	-9131	False	NA	NA
PB.6937.5	chr2	+	3277	12	novel_in_catalog	BZW1	novel	578	6	NA	NA	15	780	combination_of_known_junctions	FALSE	canonical	1	396	junction_10	853345.8088533841	NA	3	NA	TRUE	NA	NA	NA	C	coding	419	1260	178	1437	20.0	15	True	NA	NA
PB.183.3	chr1	+	2055	5	full-splice_match	TMEM50A	ENST00000491936.5	965	5	-1	-1089	-1	-7	multi-exon	FALSE	canonical	1	7567	junction_1	757051.9272333223	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-15	True	ATTAAA	-10
PB.568.1	chr1	+	3100	9	full-splice_match	VCAM1	ENST00000294728.6	3083	9	-19	2	-1	-2	multi-exon	TRUE	canonical	1	108287	junction_2	18437.910445855166	NA	0	NA	TRUE	NA	NA	NA	A	coding	739	2220	121	2340	25.0	-1	True	AGTAAA	-21
PB.6371.2	chr2	+	931	7	full-splice_match	ATRAID	ENST00000606999.5	956	7	26	-1	26	0	multi-exon	FALSE	canonical	1	1237658	junction_1	411175.2225558939	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	207	722	5.0	-24	True	AATAAA	-16
PB.6371.3	chr2	+	1074	7	full-splice_match	ATRAID	ENST00000405489.7	1059	7	-37	22	22	0	multi-exon	FALSE	canonical	1	410002	junction_1	663117.1789885003	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	351	866	0.0	-28	True	AATAAA	-15
PB.6371.1	chr2	+	1978	6	novel_in_catalog	ATRAID	novel	1240	7	NA	NA	-26	2	intron_retention	FALSE	canonical	1	1631637	junction_1	325173.4417023629	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	1252	1767	10.0	-40	True	AATAAA	-18
PB.11542.5	chr9	+	2289	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	15	2216	15	467	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-2	True	NA	NA
PB.627.8	chr1	-	3731	22	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	-5	1	any annotated donor/acceptor	FALSE	canonical	1	2418	junction_3	43332.03845443668	NA	0	NA	TRUE	NA	NA	NA	C	coding	832	2499	142	2640	20.0	-53	True	AATAAA	-18
PB.11310.2	chr8	-	2213	5	full-splice_match	TNFRSF11B	ENST00000297350.8	2402	5	181	8	-136	-8	multi-exon	FALSE	canonical	1	148306	junction_3	43963.217270236266	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	199	1404	10.0	181	False	ATTAAA	-12
PB.6365.1	chr2	+	2431	6	full-splice_match	SLC35F6	ENST00000344420.9	3898	6	3	1464	1	-1373	multi-exon	FALSE	canonical	1	212718	junction_1	59186.490068595886	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	60	1175	20.0	-30	True	NA	NA
PB.6365.3	chr2	+	3811	6	full-splice_match	SLC35F6	ENST00000344420.9	3898	6	-4	91	0	0	multi-exon	FALSE	canonical	1	212718	junction_1	59186.490068595886	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	67	1182	30.0	-37	True	AAAAAG	-11
PB.6365.2	chr2	+	3730	5	novel_in_catalog	SLC35F6	novel	3738	5	NA	NA	-26	-3	combination_of_known_junctions	TRUE	canonical	1	15156	junction_4	121550.27323910054	NA	12	NA	TRUE	NA	NA	NA	C	coding	334	1005	93	1097	30.0	-63	True	AAAAAG	-15
PB.6365.4	chr2	+	2143	1	novel_in_catalog	SLC35F6	novel	3738	5	NA	NA	3	-11784	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-28	True	NA	NA
PB.11310.3	chr8	-	3920	5	novel_in_catalog	TNFRSF11B	novel	2402	5	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	4329	junction_3	102091.71965290574	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	65	502	5.0	-1	True	ATTAAA	-14
PB.6705.12	chr2	-	1790	7	full-splice_match	SLC35F5	ENST00000498768.1	1711	7	-55	-24	-22	-1	multi-exon	FALSE	canonical	1	303212	junction_6	45604.648270641104	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	234	998	20.0	-1	True	TATAAA	-15
PB.6705.11	chr2	-	2484	16	full-splice_match	SLC35F5	ENST00000245680.6	4412	16	189	1739	-14	116	multi-exon	FALSE	canonical	1	216280	junction_7	58636.056904945435	NA	1	1	TRUE	NA	NA	NA	C	coding	523	1572	226	1797	60.0	7	True	TTTAAA	-44
PB.6705.10	chr2	-	2596	15	novel_in_catalog	SLC35F5	novel	784	3	NA	NA	23	-4	intron_retention	FALSE	canonical	1	32534	junction_1	97143.933868849	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	262	1809	20.0	-29	False	ATTAAA	-17
PB.1780.15	chr11	-	3098	2	novel_not_in_catalog	TRIM5	novel	2991	8	NA	NA	5	-1855	intron_retention	FALSE	canonical	1	90	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-16	True	NA	NA
PB.3021.1	chr12	+	3848	15	incomplete-splice_match	ULK1	ENST00000321867.5	5310	28	18544	18	-2748	-18	5prime_fragment	TRUE	canonical	1	117337	junction_9	75108.4819544031	NA	0	NA	TRUE	NA	NA	NA	A	coding	668	2007	54	2060	10.0	NA	False	AATAAA	-14
PB.2725.4	chr12	-	3082	3	full-splice_match	C12orf66	ENST00000398055.7	4151	3	8	1061	8	495	multi-exon	FALSE	canonical	1	50006	junction_2	6243.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	47	1384	85.0	-13	True	NA	NA
PB.1780.14	chr11	-	3036	4	incomplete-splice_match	TRIM5	ENST00000396847.7	3170	7	-20	12551	1	1778	3prime_fragment	FALSE	canonical	1	141465	junction_3	145424.2054290367	NA	2	NA	TRUE	NA	NA	NA	C	coding	257	774	257	1030	20.0	-20	True	NA	NA
PB.2725.1	chr12	-	2718	4	full-splice_match	C12orf66	ENST00000311915.12	2698	4	-16	-4	-9	4	multi-exon	FALSE	canonical	1	9035	junction_1	22833.469036093098	NA	2	NA	TRUE	NA	NA	NA	C	coding	468	1407	45	1451	20.0	-11	True	NA	NA
PB.5344.12	chr17	-	2632	10	novel_in_catalog	CSNK1D	novel	401	3	NA	NA	-16	-8	intron_retention	FALSE	canonical	1	100918	junction_4	391377.7986035715	NA	1	NA	TRUE	NA	NA	NA	C	coding	300	903	333	1235	40.0	-14	True	NA	NA
PB.5344.11	chr17	-	3970	9	novel_in_catalog	CSNK1D	novel	401	3	NA	NA	0	5	intron_retention	FALSE	canonical	1	649219	junction_3	300226.0269154516	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	2640	3464	5.0	-1	True	AAGAAA	-7
PB.5344.10	chr17	-	1709	9	full-splice_match	CSNK1D	ENST00000314028.10	3712	9	300	1703	0	-8	multi-exon	FALSE	canonical	1	242236	junction_1	383306.41373775626	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	51	1298	40.0	-1	True	NA	NA
PB.5376.4	chr18	-	3371	17	novel_in_catalog	L3MBTL4	novel	3546	20	NA	NA	-72	-20	no_combination_of_known_junctions	FALSE	canonical	1	838	junction_2	9127.574229361271	NA	8	1	TRUE	NA	NA	NA	C	coding	488	1467	274	1740	55.0	-77	False	AATAAA	-6
PB.3526.5	chr14	+	2787	7	full-splice_match	SLC39A9	ENST00000336643.9	3560	7	-316	1089	-10	384	multi-exon	FALSE	canonical	1	273651	junction_6	41686.0123369405	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	995	1918	35.0	-8	True	NA	NA
PB.4266.14	chr16	+	4025	25	novel_not_in_catalog	PDXDC1	novel	2963	23	NA	NA	3	-2	intron_retention	FALSE	canonical	1	132	junction_2	326666.1384945986	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	294	2615	30.0	0	True	AATAAA	-16
PB.3526.4	chr14	+	5538	8	full-splice_match	SLC39A9	ENST00000628474.2	3701	8	0	-1837	0	0	multi-exon	FALSE	canonical	1	15879	junction_2	143857.94943368723	NA	1	NA	TRUE	NA	NA	NA	C	coding	189	570	1174	1743	25.0	0	True	ATTAAA	-21
PB.8675.1	chr4	-	2083	5	novel_not_in_catalog	TMEM128	novel	1737	5	NA	NA	-29	1	any annotated donor/acceptor	FALSE	canonical	1	35783	junction_1	113250.35312831258	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	40	537	10.0	-21	False	AATAAA	-18
PB.3526.3	chr14	+	5219	6	full-splice_match	SLC39A9	ENST00000031146.8	5192	6	-20	-7	-18	0	multi-exon	FALSE	canonical	1	36215	junction_2	124373.48753074347	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	699	1424	25.0	-335	False	ATTAAA	-21
PB.8675.3	chr4	-	1240	5	full-splice_match	TMEM128	ENST00000382753.4	1221	5	-8	-11	-8	0	multi-exon	FALSE	canonical	1	156112	junction_4	66365.6760772276	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	19	516	10.0	0	True	AATAAA	-17
PB.8675.2	chr4	-	1747	5	full-splice_match	TMEM128	ENST00000254742.6	1737	5	-9	-1	-9	1	multi-exon	FALSE	canonical	1	20366	junction_4	118960.96991949713	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	597	1022	10.0	-1	True	AATAAA	-18
PB.8675.4	chr4	-	2569	5	novel_not_in_catalog	TMEM128	novel	1737	5	NA	NA	-11	0	any annotated donor/acceptor	FALSE	canonical	1	20366	junction_4	137491.48042401572	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	599	1024	10.0	-3	True	AATAAA	-17
PB.5949.9	chr19	-	3322	3	full-splice_match	ZNF260	ENST00000523638.5	5666	3	334	2010	-58	-926	multi-exon	FALSE	canonical	1	63171	junction_1	3542.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	409	1230	798	2027	65.0	356	False	NA	NA
PB.12097.18	chrX	+	2522	16	full-splice_match	GNL3L	ENST00000360845.2	2135	16	29	-416	29	108	multi-exon	FALSE	canonical	1	122053	junction_1	44791.011957708164	NA	1	NA	TRUE	NA	NA	NA	C	coding	582	1749	197	1945	25.0	33	True	AATAAA	-15
PB.3526.1	chr14	+	5036	7	full-splice_match	SLC39A9	ENST00000336643.9	3560	7	361	-1837	315	0	multi-exon	FALSE	canonical	1	273651	junction_6	41686.0123369405	NA	0	NA	TRUE	NA	NA	NA	C	coding	307	924	318	1241	25.0	46	False	ATTAAA	-21
PB.5376.5	chr18	-	3300	15	novel_not_in_catalog	L3MBTL4	novel	3546	20	NA	NA	71351	-20	any annotated donor/acceptor	FALSE	canonical	1	144	junction_14	9140.480760365519	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1584	223	1806	55.0	-46	False	AATAAA	-6
PB.10778.13	chr7	-	2836	20	novel_in_catalog	COG5	novel	4532	21	NA	NA	15	-422	no_combination_of_known_junctions	FALSE	canonical	1	3239	junction_1	89358.66787703922	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	24	2306	75.0	0	True	NA	NA
PB.10778.12	chr7	-	3044	22	full-splice_match	COG5	ENST00000297135.7	4060	22	594	422	14	-422	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	25	2514	75.0	-1	True	NA	NA
PB.10778.11	chr7	-	3198	22	full-splice_match	COG5	ENST00000297135.7	4060	22	581	281	1	-281	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	38	2527	30.0	-14	True	AATAAA	-15
PB.10778.10	chr7	-	3277	22	full-splice_match	COG5	ENST00000297135.7	4060	22	594	189	14	-189	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	25	2514	45.0	-1	True	AATAAA	-18
PB.10778.17	chr7	-	2709	21	full-splice_match	COG5	ENST00000393603.6	5418	21	341	2368	14	239	multi-exon	FALSE	canonical	1	129228	junction_20	64235.70905571138	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	25	2403	15.0	-1	True	NA	NA
PB.10778.16	chr7	-	5084	21	full-splice_match	COG5	ENST00000393603.6	5418	21	328	6	1	-6	multi-exon	FALSE	canonical	1	129228	junction_20	64235.70905571138	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	38	2416	15.0	-14	True	AATAAA	-12
PB.10778.15	chr7	-	2608	22	full-splice_match	COG5	ENST00000297135.7	4060	22	595	857	15	-857	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	1	NA	TRUE	NA	NA	NA	C	coding	829	2490	24	2513	35.0	0	True	NA	NA
PB.10778.14	chr7	-	2915	22	full-splice_match	COG5	ENST00000297135.7	4060	22	605	540	25	-540	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	14	2503	30.0	10	True	ACTAAA	-25
PB.969.1	chr1	+	4150	14	full-splice_match	XPR1	ENST00000367589.3	4126	14	-26	2	2	-2	multi-exon	FALSE	canonical	1	14360	junction_10	68658.31403949241	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	197	2092	40.0	-16	True	AATAAA	-17
PB.5949.4	chr19	-	4723	2	novel_in_catalog	ZNF260	novel	5666	3	NA	NA	-1	3	no_combination_of_known_junctions	FALSE	canonical	1	9896	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	519	1748	15.0	0	True	AATAAA	-25
PB.5949.5	chr19	-	4942	3	full-splice_match	ZNF260	ENST00000523638.5	5666	3	394	330	-1	3	multi-exon	FALSE	canonical	1	63171	junction_1	3542.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	409	1230	738	1967	15.0	0	True	AATAAA	-25
PB.6090.1	chr19	+	1986	2	full-splice_match	FOXA3	ENST00000302177.2	1989	2	2	1	2	-1	multi-exon	FALSE	canonical	1	44817	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	350	1053	196	1248	15.0	-64	False	ATTAAA	-20
PB.6163.1	chr19	-	2512	11	full-splice_match	SYT3	ENST00000600079.5	2463	11	-51	2	-42	-2	multi-exon	TRUE	canonical	1	3525	junction_1	16579.33923170643	NA	2	1	TRUE	NA	NA	NA	A	coding	590	1773	234	2006	10.0	-21	True	AATAAA	-23
PB.4139.2	chr16	-	3319	8	novel_in_catalog	WDR24	novel	3245	9	NA	NA	3	0	intron_retention	FALSE	canonical	1	89829	junction_6	38163.948252298025	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	758	2212	10.0	0	True	AATAAA	-15
PB.4139.3	chr16	-	3258	9	full-splice_match	WDR24	ENST00000293883.8	3245	9	-13	0	-13	0	multi-exon	FALSE	canonical	1	89829	junction_7	35747.42668360899	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	774	3146	10.0	6838	False	AATAAA	-15
PB.4139.1	chr16	-	3408	7	novel_not_in_catalog	WDR24	novel	3245	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	20	junction_5	66024.56007279076	NA	21	1	TRUE	NA	NA	NA	C	coding	232	699	760	1458	10.0	-2	True	AATAAA	-15
PB.569.6	chr1	-	2424	5	full-splice_match	EXTL2	ENST00000370114.7	3985	5	-11	1572	-11	201	multi-exon	FALSE	canonical	1	111019	junction_4	39426.59698097212	NA	8	1	TRUE	NA	NA	NA	C	coding	325	975	1449	2423	75.0	809	False	NA	NA
PB.4139.4	chr16	-	3885	7	novel_in_catalog	WDR24	novel	3245	9	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	89829	junction_5	38415.969168288444	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	768	2114	10.0	-10	True	AATAAA	-14
PB.11673.14	chr9	+	5587	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	159	-568	-97	568	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	98	2470	70.0	-1	True	NA	NA
PB.11673.15	chr9	+	4043	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	187	948	-69	-940	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	70	2442	15.0	-8	True	NA	NA
PB.11673.16	chr9	+	4199	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	195	784	-61	-776	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	3	NA	TRUE	NA	NA	NA	C	coding	790	2373	62	2434	60.0	0	True	NA	NA
PB.11673.10	chr9	+	3078	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	135	1965	93	1707	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	122	2494	35.0	2	True	AATAAA	-16
PB.11673.11	chr9	+	2906	23	novel_not_in_catalog	NCBP1	novel	5178	23	NA	NA	97	1554	any annotated donor/acceptor	FALSE	canonical	1	48	junction_3	148625.30526606075	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	118	2475	25.0	6	True	AATAAA	-20
PB.11673.12	chr9	+	3824	23	full-splice_match	NCBP1	ENST00000375147.7	5178	23	142	1212	100	-1204	multi-exon	FALSE	canonical	1	196058	junction_1	118677.76563399775	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	115	2487	25.0	9	True	AGTAAA	-22
PB.11615.1	chr9	+	2067	8	full-splice_match	PSAT1	ENST00000347159.6	1411	8	-18	-638	-18	-1	multi-exon	TRUE	canonical	1	54719	junction_7	141394.3144011795	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	87	1061	25.0	-2	True	ATTAAA	-16
PB.1211.11	chr1	-	1930	2	full-splice_match	IRF2BP2	ENST00000366610.7	4615	2	166	2519	166	443	multi-exon	FALSE	canonical	1	999927	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	439	1581	80.0	3412	False	NA	NA
PB.5949.2	chr19	-	5689	3	full-splice_match	ZNF260	ENST00000523638.5	5666	3	-23	0	-23	0	multi-exon	FALSE	canonical	1	63171	junction_1	3542.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	1155	2384	20.0	-1	True	NA	NA
PB.3035.2	chr12	+	3704	6	full-splice_match	ZNF268	ENST00000536435.6	13475	6	86	9685	0	25	multi-exon	FALSE	canonical	1	44271	junction_5	23963.704408125217	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	245	3088	100.0	-19	True	AATAAA	-44
PB.3035.3	chr12	+	3596	6	full-splice_match	ZNF268	ENST00000536435.6	13475	6	86	9793	0	15	multi-exon	FALSE	canonical	1	44271	junction_5	23963.704408125217	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	245	3088	45.0	-19	True	NA	NA
PB.11274.1	chr8	-	2224	15	full-splice_match	PABPC1	ENST00000318607.9	3485	15	1261	0	57	0	multi-exon	FALSE	canonical	1	1799488	junction_8	1718957.1034622034	NA	0	NA	TRUE	NA	NA	NA	C	coding	591	1776	4	1779	15.0	1306	False	AATAAA	-17
PB.3035.1	chr12	+	3764	7	novel_in_catalog	AC026786.1	novel	1374	11	NA	NA	50497	2776	no_combination_of_known_junctions	FALSE	canonical	1	12862	junction_1	29454.985930040584	NA	0	NA	TRUE	NA	NA	NA	A	coding	786	2361	789	3149	100.0	-55	False	AATAAA	-43
PB.3035.6	chr12	+	3787	7	full-splice_match	ZNF268	ENST00000541009.6	3773	7	-44	30	1	22	multi-exon	FALSE	canonical	1	52542	junction_5	21618.714133952453	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	814	3174	95.0	1	True	AATAAA	-41
PB.3035.4	chr12	+	3701	7	full-splice_match	ZNF268	ENST00000541009.6	3773	7	-63	135	1	15	multi-exon	FALSE	canonical	1	52542	junction_5	21618.714133952453	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	833	3193	45.0	-18	True	NA	NA
PB.3035.5	chr12	+	3636	6	full-splice_match	ZNF268	ENST00000228289.9	3543	6	29	-122	0	24	multi-exon	FALSE	canonical	1	12862	junction_1	33036.391907107536	NA	0	NA	TRUE	NA	NA	NA	C	coding	947	2844	178	3021	100.0	-11	True	AATAAA	-43
PB.12110.1	chrX	+	4547	1	full-splice_match	ZXDB	ENST00000374888.2	5894	1	1265	82	1265	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	449	1350	195	1544	60.0	-3409	False	AATAAA	-6
PB.5772.8	chr19	+	2479	6	novel_not_in_catalog	MRI1	novel	862	4	NA	NA	15	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	161895.6675956463	NA	1	1	TRUE	NA	NA	NA	C	coding	140	423	739	1161	15.0	3	True	AATAAA	-18
PB.8021.7	chr3	+	2875	16	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	-5	-18606	any annotated donor/acceptor	FALSE	canonical	1	477	junction_15	17184.004228222115	NA	1	1	TRUE	NA	NA	NA	C	coding	462	1389	77	1465	20.0	-15	True	NA	NA
PB.11708.4	chr9	-	4787	37	full-splice_match	ELP1	ENST00000374647.9	5905	37	0	1118	0	6	multi-exon	FALSE	canonical	1	114880	junction_36	100887.06885819713	NA	2	1	TRUE	NA	NA	NA	C	coding	1332	3999	309	4307	20.0	-30	True	AATAAA	-19
PB.6506.2	chr2	-	2908	1	full-splice_match	AC008074.2	ENST00000561559.1	1907	1	-1318	317	-1318	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	160	483	823	1305	30.0	-1	True	TATAAA	-20
PB.6506.1	chr2	-	3235	1	full-splice_match	AC008074.2	ENST00000561559.1	1907	1	-1332	4	-1332	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	160	483	837	1319	15.0	-15	True	NA	NA
PB.7394.2	chr20	-	1572	6	novel_in_catalog	PSMA7	novel	685	5	NA	NA	6	-1	intron_retention	FALSE	canonical	1	4274352	junction_3	645459.1785177432	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	122	571	20.0	-31	True	AATAAA	-13
PB.7394.3	chr20	-	1377	6	novel_in_catalog	PSMA7	novel	685	5	NA	NA	30	0	intron_retention	FALSE	canonical	1	4274352	junction_3	645459.1785177432	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	98	547	80.0	-7	True	AAGAAA	-25
PB.7394.1	chr20	-	1004	7	full-splice_match	PSMA7	ENST00000370873.8	996	7	-1	-7	-1	7	multi-exon	TRUE	canonical	1	4274352	junction_3	627482.1575277393	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	129	875	25.0	-38	True	AATAAA	-21
PB.3465.1	chr14	+	3861	10	novel_in_catalog	PSMA3	novel	970	11	NA	NA	3	0	intron_retention	FALSE	canonical	1	1704165	junction_9	298302.91491480044	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	88	681	30.0	-22	True	ATTAAA	-15
PB.8027.8	chr3	-	3109	5	novel_not_in_catalog	CSRNP1	novel	3148	5	NA	NA	6349	-2	any annotated donor/acceptor	FALSE	canonical	1	1044	junction_4	146562.2508356091	NA	1	1	TRUE	NA	NA	NA	C	coding	609	1830	82	1911	25.0	7414	False	AATAAA	-14
PB.7394.4	chr20	-	855	7	full-splice_match	PSMA7	ENST00000370873.8	996	7	-31	172	-21	0	multi-exon	FALSE	canonical	1	4274352	junction_3	627482.1575277393	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	696	159	854	80.0	-68	True	AAGAAA	-25
PB.3465.2	chr14	+	955	11	full-splice_match	PSMA3	ENST00000216455.8	970	11	15	0	0	0	multi-exon	FALSE	canonical	1	1704165	junction_10	290054.5817594337	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	76	843	25.0	-10	True	ATTAAA	-18
PB.11701.12	chr9	+	4987	5	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	19	-1614	no_combination_of_known_junctions	FALSE	canonical	1	5222	junction_4	26696.708227560564	NA	2	NA	TRUE	NA	NA	NA	C	coding	130	393	158	550	35.0	-937	False	AATAAA	-21
PB.11701.13	chr9	+	3703	8	full-splice_match	FSD1L	ENST00000374707.1	7062	8	30	3329	30	2302	multi-exon	FALSE	canonical	1	21117	junction_1	18017.593202654083	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	147	1082	10.0	-16	True	ATTAAA	-15
PB.1233.8	chr1	+	3258	16	novel_in_catalog	EXO1	novel	583	3	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	69351	junction_2	49298.1835110923	NA	1	1	TRUE	NA	NA	NA	B	coding	846	2541	573	3113	15.0	0	True	AATACA	-18
PB.11701.11	chr9	+	2536	8	full-splice_match	FSD1L	ENST00000374707.1	7062	8	-11	4537	-11	1094	multi-exon	FALSE	canonical	1	21117	junction_1	18017.593202654083	NA	1	NA	TRUE	NA	NA	NA	C	coding	311	936	188	1123	25.0	0	True	AATATA	-16
PB.11701.16	chr9	+	3733	9	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	33	2302	combination_of_known_junctions	FALSE	canonical	1	5607	junction_5	26389.16399774726	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	144	1112	10.0	-13	True	ATTAAA	-15
PB.11701.14	chr9	+	3362	6	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	30	2302	no_combination_of_known_junctions	FALSE	canonical	1	950	junction_5	25792.463446518635	NA	0	NA	TRUE	NA	NA	NA	C	coding	180	543	147	689	10.0	-16	True	ATTAAA	-15
PB.11701.15	chr9	+	3261	5	novel_in_catalog	FSD1L	novel	1906	11	NA	NA	30	2302	no_combination_of_known_junctions	FALSE	canonical	1	5222	junction_4	26696.708227560564	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	147	539	10.0	-16	True	ATTAAA	-15
PB.954.11	chr1	-	2439	16	novel_in_catalog	COP1	novel	2131	9	NA	NA	-172	0	no_combination_of_known_junctions	FALSE	canonical	1	14253	junction_14	127231.34276210751	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	817	2118	25.0	-12	True	AATAAA	-37
PB.1835.1	chr11	-	6382	17	novel_not_in_catalog	SOX6	novel	8808	15	NA	NA	-16	-2646	any annotated donor/acceptor	FALSE	canonical	1	1016	junction_14	16207.057343465376	NA	2	NA	TRUE	NA	NA	NA	B	coding	788	2367	302	2668	100.0	6204	False	NA	NA
PB.1835.2	chr11	-	2542	1	incomplete-splice_match	SOX6	ENST00000316399.10	8808	15	369633	2646	43691	-2646	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	7063	False	NA	NA
PB.8027.7	chr3	-	3144	5	full-splice_match	CSRNP1	ENST00000273153.9	3148	5	2	2	2	-2	multi-exon	FALSE	canonical	1	203042	junction_4	66255.34572206231	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	177	1946	25.0	-13	True	AATAAA	-14
PB.8027.4	chr3	-	3213	5	novel_not_in_catalog	CSRNP1	novel	3148	5	NA	NA	14	1	any annotated donor/acceptor	FALSE	canonical	1	6907	junction_2	133706.20591501167	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	1023	2012	20.0	-1	True	AATAAA	-17
PB.1140.15	chr1	+	2707	23	full-splice_match	MIA3	ENST00000340535.11	2735	23	26	2	26	-2	multi-exon	FALSE	canonical	1	50489	junction_3	162666.13174467775	NA	1	NA	TRUE	NA	NA	NA	C	coding	785	2358	148	2505	25.0	0	True	AATAAA	-17
PB.10853.5	chr7	+	2346	9	full-splice_match	EXOC4	ENST00000462055.5	2364	9	-11	29	11	-29	multi-exon	FALSE	canonical	1	350029	junction_7	46040.482575120775	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	19	1443	95.0	1	True	NA	NA
PB.8553.11	chr3	+	6351	30	novel_in_catalog	YEATS2	novel	6506	31	NA	NA	-9	0	no_combination_of_known_junctions	FALSE	canonical	1	5241	junction_6	70702.55446622802	NA	1	NA	TRUE	NA	NA	NA	C	coding	1368	4107	205	4311	5.0	3	True	AATAAA	-16
PB.8027.5	chr3	-	3197	5	novel_not_in_catalog	CSRNP1	novel	3148	5	NA	NA	5191	1	any annotated donor/acceptor	FALSE	canonical	1	1507	junction_4	146368.79426704143	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	227	1996	20.0	6256	False	AATAAA	-17
PB.10853.4	chr7	+	3468	11	novel_not_in_catalog	EXOC4	novel	1604	10	NA	NA	4	-5169	any annotated donor/acceptor	FALSE	canonical	1	1813	junction_10	126661.02933045349	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	26	1678	15.0	-6	True	ATTAAA	-15
PB.8027.2	chr3	-	3136	5	novel_not_in_catalog	CSRNP1	novel	3148	5	NA	NA	5624	3	any annotated donor/acceptor	FALSE	canonical	1	4088	junction_4	145290.71711916078	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	11	1933	15.0	6689	False	AATAAA	-19
PB.1153.7	chr1	+	1911	7	novel_in_catalog	CNIH3	novel	876	6	NA	NA	-16	4	combination_of_known_junctions	FALSE	canonical	1	454	junction_1	20424.979328154914	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-20	True	ATTAAA	-17
PB.8027.3	chr3	-	3193	5	novel_not_in_catalog	CSRNP1	novel	3148	5	NA	NA	5416	-2	any annotated donor/acceptor	FALSE	canonical	1	1001	junction_4	146580.2186029462	NA	2	NA	TRUE	NA	NA	NA	C	coding	589	1770	226	1995	25.0	6481	False	AATAAA	-14
PB.10853.6	chr7	+	4473	18	novel_in_catalog	EXOC4	novel	1604	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	993	junction_1	102954.244772377	NA	12	NA	TRUE	NA	NA	NA	C	coding	873	2622	622	3243	25.0	7	True	ATTAAA	-19
PB.10096.3	chr6	-	2468	20	novel_not_in_catalog	RARS2	novel	1818	20	NA	NA	16	445	any annotated donor/acceptor	FALSE	canonical	1	128809	junction_19	121965.65985289385	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	777	1988	25.0	-11	True	AATAAA	-19
PB.6250.1	chr19	+	4472	3	full-splice_match	ZIK1	ENST00000599456.1	2860	3	-120	-1492	0	105	multi-exon	FALSE	canonical	1	15341	junction_1	19196.5	NA	3	NA	TRUE	NA	NA	NA	C	coding	432	1299	567	1865	50.0	-5	True	NA	NA
PB.6250.2	chr19	+	4507	4	novel_in_catalog	ZIK1	novel	572	2	NA	NA	0	106	combination_of_known_junctions	FALSE	canonical	1	9425	junction_1	18973.257220507912	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	493	1899	45.0	0	True	NA	NA
PB.6250.3	chr19	+	2453	4	novel_in_catalog	ZIK1	novel	572	2	NA	NA	0	-561	combination_of_known_junctions	FALSE	canonical	1	9425	junction_1	18973.257220507912	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	493	1899	10.0	0	True	AATAAA	-19
PB.6250.4	chr19	+	2230	4	full-splice_match	ZIK1	ENST00000597850.1	4181	4	3	1948	0	-561	multi-exon	FALSE	canonical	1	9553	junction_1	18932.591693221035	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	213	1676	10.0	0	True	AATAAA	-19
PB.1918.10	chr11	+	2558	17	full-splice_match	ATG13	ENST00000524625.5	4014	17	-21	1477	-1	2	multi-exon	FALSE	canonical	1	84786	junction_2	143302.18115265857	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	405	1847	20.0	-22	True	AATAAA	-22
PB.1918.11	chr11	+	4849	16	novel_in_catalog	ATG13	novel	624	5	NA	NA	3	-3	intron_retention	FALSE	canonical	1	84786	junction_2	147619.63800681202	NA	2	NA	TRUE	NA	NA	NA	C	coding	285	858	1807	2664	15.0	-18	True	AATAAA	-17
PB.1918.12	chr11	+	2685	18	novel_in_catalog	ATG13	novel	624	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1098	junction_2	185200.62716702346	NA	1	NA	TRUE	NA	NA	NA	C	coding	480	1443	534	1976	20.0	-14	True	AATAAA	-20
PB.7716.3	chr22	-	2573	4	novel_not_in_catalog	PATZ1	novel	3781	5	NA	NA	-113	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	184047.85983180208	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	236	1849	20.0	-9	True	GATAAA	-13
PB.5359.1	chr18	+	1528	7	full-splice_match	TYMS	ENST00000323274.14	1662	7	55	79	-6	15	multi-exon	FALSE	canonical	1	1156558	junction_1	357127.3202348693	NA	0	NA	TRUE	NA	NA	NA	A	coding	313	942	85	1026	15.0	6	True	AATAAA	-20
PB.7904.2	chr3	+	1246	2	novel_in_catalog	SETMAR	novel	2443	3	NA	NA	2	-1	no_combination_of_known_junctions	FALSE	canonical	1	33400	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	77	1228	45.0	2	True	NA	NA
PB.7904.1	chr3	+	2142	3	full-splice_match	SETMAR	ENST00000358065.4	2443	3	12	289	12	13	multi-exon	FALSE	canonical	1	33112	junction_1	35715.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	95	2110	50.0	-306	False	NA	NA
PB.11284.31	chr8	-	3450	13	full-splice_match	AZIN1	ENST00000347770.8	2857	13	30	-623	30	623	multi-exon	FALSE	canonical	1	255936	junction_11	419399.19841770054	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	737	2083	15.0	-1	True	AATAAA	-23
PB.8179.3	chr3	+	2717	18	full-splice_match	PRKCD	ENST00000394729.6	2810	18	91	2	12	-2	multi-exon	FALSE	canonical	1	52789	junction_1	178388.42656776198	NA	2	NA	TRUE	NA	NA	NA	C	coding	676	2031	238	2268	25.0	-6	True	AATAAA	-15
PB.1129.24	chr1	-	2292	17	incomplete-splice_match	EPRS	ENST00000366923.7	5014	32	149	32547	21	53	3prime_fragment	FALSE	canonical	1	605857	junction_9	176442.60422000548	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2169	122	2290	50.0	162	False	NA	NA
PB.8179.1	chr3	+	3020	18	novel_not_in_catalog	PRKCD	novel	589	4	NA	NA	10	-2	any annotated donor/acceptor	FALSE	canonical	1	2942	junction_13	219026.8061098733	NA	3	NA	TRUE	NA	NA	NA	C	coding	490	1473	240	1712	25.0	-8	True	AATAAA	-15
PB.3125.29	chr13	-	2469	9	novel_in_catalog	ELF1	novel	3563	9	NA	NA	40	-168	combination_of_known_junctions	FALSE	canonical	1	147632	junction_8	194412.30071406876	NA	1	NA	TRUE	NA	NA	NA	C	coding	559	1677	792	2468	60.0	-17	True	NA	NA
PB.3125.28	chr13	-	2920	8	novel_in_catalog	ELF1	novel	3563	9	NA	NA	-2	-198	no_combination_of_known_junctions	FALSE	canonical	1	6359	junction_1	266891.0086467691	NA	1	1	TRUE	NA	NA	NA	C	coding	469	1410	318	1727	45.0	-1	True	NA	NA
PB.6713.6	chr2	+	2247	2	full-splice_match	TMEM177	ENST00000496203.5	881	2	-11	-1355	1	1312	multi-exon	FALSE	canonical	1	12782	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-9	True	NA	NA
PB.3125.26	chr13	-	3381	9	full-splice_match	ELF1	ENST00000239882.6	3566	9	-13	198	-13	-198	multi-exon	FALSE	canonical	1	290146	junction_8	156444.73086285137	NA	0	NA	TRUE	NA	NA	NA	C	coding	619	1860	329	2188	45.0	-12	True	NA	NA
PB.3125.25	chr13	-	3433	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-2	-198	any annotated donor/acceptor	FALSE	canonical	1	6837	junction_9	282941.9370063209	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	381	2240	45.0	-1	True	NA	NA
PB.3125.24	chr13	-	3561	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-2	-198	any annotated donor/acceptor	FALSE	canonical	1	2456	junction_9	283799.5578903629	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	509	2368	45.0	-1	True	NA	NA
PB.3125.23	chr13	-	3396	9	novel_in_catalog	ELF1	novel	3563	9	NA	NA	488	-198	combination_of_known_junctions	FALSE	canonical	1	147632	junction_8	194412.30071406876	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	344	2203	45.0	-3	True	NA	NA
PB.6713.3	chr2	+	1393	2	full-splice_match	TMEM177	ENST00000272521.6	1394	2	1	0	1	0	multi-exon	FALSE	canonical	1	72151	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	129	1064	0.0	1	True	NA	NA
PB.3125.21	chr13	-	3651	10	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-19	3	any annotated donor/acceptor	FALSE	canonical	1	6837	junction_9	282941.9370063209	NA	1	NA	TRUE	NA	NA	NA	C	coding	619	1860	398	2257	15.0	-18	True	AATAAA	-15
PB.3125.20	chr13	-	3692	11	novel_not_in_catalog	ELF1	novel	3563	9	NA	NA	-2	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	314515.6931556993	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	760	2298	15.0	-1	True	AATAAA	-15
PB.4373.2	chr16	-	3405	3	full-splice_match	ZNF747	ENST00000568028.1	1511	3	39	-1933	39	-6	multi-exon	FALSE	canonical	1	39863	junction_2	17743.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	287	1279	25.0	5	True	ATTAAA	-15
PB.8334.31	chr3	-	2732	13	incomplete-splice_match	GOLGB1	ENST00000340645.9	11187	22	14	34689	-1	-861	3prime_fragment	FALSE	canonical	1	27753	junction_7	63689.75077649638	NA	0	NA	TRUE	NA	NA	NA	C	coding	873	2619	113	2731	60.0	-1	True	AGTAAA	-41
PB.11313.9	chr8	-	3787	28	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	91542.88709411221	NA	4	1	TRUE	NA	NA	NA	B	coding	1037	3111	677	3787	70.0	1	True	NA	NA
PB.8179.4	chr3	+	2608	19	full-splice_match	PRKCD	ENST00000330452.7	2680	19	10	62	10	-62	multi-exon	FALSE	canonical	1	34744	junction_1	209235.09607330593	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	352	2382	30.0	-8	True	NA	NA
PB.7155.4	chr20	+	1777	7	full-splice_match	PANK2	ENST00000610179.5	1807	7	-49	79	-21	-8	multi-exon	FALSE	canonical	1	177003	junction_2	82772.24366228627	NA	0	NA	TRUE	NA	NA	NA	C	coding	447	1344	105	1448	5.0	1	True	NA	NA
PB.11313.4	chr8	-	5196	27	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_26	84871.11072460817	NA	1	1	TRUE	NA	NA	NA	B	coding	1082	3249	799	4047	15.0	-13	False	AATAAA	-16
PB.8179.5	chr3	+	2800	19	novel_in_catalog	PRKCD	novel	589	4	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	1	136	junction_1	223465.0628043205	NA	3	NA	TRUE	NA	NA	NA	C	coding	676	2031	321	2351	25.0	-7	True	AATAAA	-15
PB.11313.1	chr8	-	4912	27	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	13	4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_25	81915.93895007542	NA	1	1	TRUE	NA	NA	NA	B	coding	1030	3093	667	3759	5.0	-10	False	AATAAA	-20
PB.11313.2	chr8	-	4865	25	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-5	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_24	82387.92395830667	NA	1	1	TRUE	NA	NA	NA	B	coding	1030	3093	624	3716	15.0	1	True	AATAAA	-16
PB.1820.6	chr11	-	1793	2	incomplete-splice_match	ZBED5	ENST00000533925.5	533	3	37	4743	0	-21	3prime_fragment	FALSE	canonical	1	230041	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	102	306	1488	1793	80.0	-1	True	NA	NA
PB.1820.7	chr11	-	2842	1	novel_in_catalog	ZBED5	novel	533	3	NA	NA	14	-443	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	1	True	NA	NA
PB.1820.4	chr11	-	2573	3	full-splice_match	ZBED5	ENST00000413761.6	2512	3	-23	-38	6	38	multi-exon	FALSE	canonical	1	205987	junction_1	12027.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	559	2535	65.0	-7	True	NA	NA
PB.1820.5	chr11	-	3145	1	novel_in_catalog	ZBED5	novel	533	3	NA	NA	35	-21	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	102	306	2840	3145	80.0	268	False	NA	NA
PB.1820.2	chr11	-	2641	3	full-splice_match	ZBED5	ENST00000432999.6	2741	3	14	86	6	74	multi-exon	FALSE	canonical	1	37110	junction_1	96465.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	591	2567	35.0	-7	True	AATAAA	-23
PB.1820.3	chr11	-	5226	1	novel_in_catalog	ZBED5	novel	533	3	NA	NA	12	36	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	658	1977	3214	5190	60.0	-1	True	NA	NA
PB.11274.7	chr8	-	2722	14	novel_in_catalog	PABPC1	novel	608	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	32967	junction_9	2091134.424720876	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	505	2277	15.0	-1	True	AATAAA	-17
PB.1820.1	chr11	-	2595	3	full-splice_match	ZBED5	ENST00000413761.6	2512	3	-17	-66	12	66	multi-exon	FALSE	canonical	1	205987	junction_1	12027.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	658	1977	553	2529	15.0	-1	True	AATAAA	-15
PB.392.13	chr1	-	2896	10	novel_in_catalog	EFCAB14	novel	5767	11	NA	NA	-56	369	combination_of_known_junctions	FALSE	canonical	1	112291	junction_8	170322.10009998447	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	1034	2329	30.0	-17	True	ATTAAA	-37
PB.4373.4	chr16	-	2520	3	full-splice_match	ZNF747	ENST00000568028.1	1511	3	168	-1177	82	-762	multi-exon	FALSE	canonical	1	39863	junction_2	17743.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	158	1150	25.0	-1	True	NA	NA
PB.11152.41	chr8	-	4532	2	novel_in_catalog	ASPH	novel	5268	25	NA	NA	-4	544	intron_retention	FALSE	canonical	1	1265348	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	0	True	AATAAA	-14
PB.11152.40	chr8	-	2533	4	full-splice_match	ASPH	ENST00000517856.5	6337	4	-61	3865	-8	1821	multi-exon	FALSE	canonical	1	40533	junction_1	924573.0975970598	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	278	619	85.0	8411	False	NA	NA
PB.7155.2	chr20	+	1746	7	full-splice_match	PANK2	ENST00000336066.7	1843	7	-1	98	1	55	multi-exon	FALSE	canonical	1	170604	junction_2	84529.29317780251	NA	0	NA	TRUE	NA	NA	NA	C	coding	134	405	879	1283	40.0	1	True	NA	NA
PB.1035.13	chr1	+	5256	24	novel_in_catalog	IPO9	novel	11435	24	NA	NA	41	-8	intron_retention	FALSE	canonical	1	44700	junction_1	183732.4948129043	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	585	2045	30.0	-13	True	NA	NA
PB.8348.19	chr3	+	6860	17	novel_not_in_catalog	PARP14	novel	7915	17	NA	NA	0	-958	any annotated donor/acceptor	FALSE	canonical	1	4964	junction_9	133144.40158607814	NA	1	NA	TRUE	NA	NA	NA	C	coding	1209	3630	26	3655	20.0	0	True	ATTAAA	-39
PB.7972.8	chr3	+	2399	6	novel_not_in_catalog	KAT2B	novel	4833	18	NA	NA	-7914	-3	any annotated donor/acceptor	FALSE	canonical	1	3420	junction_5	101437.29301317144	NA	1	NA	TRUE	NA	NA	NA	C	coding	22	69	280	348	15.0	NA	False	AAAAAG	-5
PB.9532.8	chr5	+	3041	12	full-splice_match	DELE1	ENST00000432126.6	4970	12	33	1896	-14	5	multi-exon	FALSE	canonical	1	247536	junction_10	96567.88585504188	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	102	1649	20.0	-2	True	AATAAA	-20
PB.9532.9	chr5	+	3878	11	novel_in_catalog	DELE1	novel	4970	12	NA	NA	-13	5	intron_retention	FALSE	canonical	1	247536	junction_9	98004.55063332518	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	101	1054	20.0	-1	True	AATAAA	-20
PB.9532.6	chr5	+	2425	12	full-splice_match	DELE1	ENST00000432126.6	4970	12	20	2525	20	574	multi-exon	FALSE	canonical	1	247536	junction_10	96567.88585504188	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	115	1662	20.0	-15	True	NA	NA
PB.9532.7	chr5	+	2361	14	novel_not_in_catalog	DELE1	novel	4970	12	NA	NA	21	5	any annotated donor/acceptor	FALSE	canonical	1	39403	junction_13	165910.64406905387	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	114	1661	20.0	-14	True	AATAAA	-20
PB.9532.4	chr5	+	2157	10	incomplete-splice_match	DELE1	ENST00000194118.8	2203	13	-15	4628	-15	496	3prime_fragment	FALSE	canonical	1	352674	junction_8	77433.4045845561	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	103	1287	15.0	-3	True	ATTAAA	-36
PB.9532.5	chr5	+	2989	9	novel_in_catalog	DELE1	novel	4970	12	NA	NA	20	478	intron_retention	FALSE	canonical	1	376784	junction_6	71690.36341262593	NA	17	NA	TRUE	NA	NA	NA	C	coding	317	954	115	1068	30.0	-15	True	ATTAAA	-18
PB.9532.2	chr5	+	2317	13	novel_in_catalog	DELE1	novel	4970	12	NA	NA	12	5	no_combination_of_known_junctions	FALSE	canonical	1	81607	junction_12	133436.68550048058	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	123	1670	20.0	-23	True	AATAAA	-20
PB.7503.4	chr21	-	2104	12	novel_not_in_catalog	AP000311.1	novel	1078	8	NA	NA	289846	-9815	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	94872.22462374248	NA	1	NA	TRUE	NA	NA	NA	B	coding	318	957	88	1044	45.0	2166	False	ATTAAA	-38
PB.7972.2	chr3	+	4153	17	novel_in_catalog	KAT2B	novel	4833	18	NA	NA	-82	-2	no_combination_of_known_junctions	FALSE	canonical	1	11642	junction_16	63937.568050794674	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	334	2088	15.0	-32	True	AAAAAG	-6
PB.9532.1	chr5	+	5673	11	novel_in_catalog	DELE1	novel	4970	12	NA	NA	12	5	intron_retention	FALSE	canonical	1	343565	junction_10	81282.27530181472	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	123	1307	20.0	-23	True	AATAAA	-20
PB.7581.20	chr21	+	2172	12	full-splice_match	PRMT2	ENST00000355680.7	2688	12	508	8	1	-8	multi-exon	FALSE	canonical	1	290231	junction_10	299188.60050744464	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	255	1556	20.0	1	True	NA	NA
PB.8689.8	chr4	+	2579	14	full-splice_match	TBC1D14	ENST00000409757.8	4925	14	-48	2394	-48	-2394	multi-exon	FALSE	canonical	1	66783	junction_1	123325.16806615096	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	173	2254	35.0	-29	True	ATTAAA	-19
PB.8689.9	chr4	+	5017	15	novel_not_in_catalog	TBC1D14	novel	663	2	NA	NA	-42	-1	any annotated donor/acceptor	FALSE	canonical	1	63	junction_4	166419.07425840799	NA	3	NA	TRUE	NA	NA	NA	C	coding	709	2130	167	2296	20.0	-23	True	AATAAA	-19
PB.6478.5	chr2	+	3693	14	novel_in_catalog	VRK2	novel	2657	19	NA	NA	12	1722	intron_retention	FALSE	canonical	1	34560	junction_1	111777.46916400487	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	174	1367	70.0	-33	True	AGTAAA	-8
PB.8689.1	chr4	+	4873	14	full-splice_match	TBC1D14	ENST00000448507.5	4887	14	9	5	9	-1	multi-exon	FALSE	canonical	1	22036	junction_1	131928.6758712301	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	71	2152	20.0	-13	True	AATAAA	-19
PB.2314.22	chr11	-	2144	15	novel_not_in_catalog	HYOU1	novel	4529	26	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	403083.8778448081	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	57	1682	10.0	0	True	AATAAA	-15
PB.7503.5	chr21	-	1948	12	novel_not_in_catalog	AP000311.1	novel	1078	8	NA	NA	289844	-9973	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	94872.22462374248	NA	1	NA	TRUE	NA	NA	NA	B	coding	318	957	90	1046	100.0	2164	False	NA	NA
PB.8689.4	chr4	+	4736	11	novel_in_catalog	TBC1D14	novel	663	2	NA	NA	-58	1	no_combination_of_known_junctions	FALSE	canonical	1	19627	junction_7	170157.75171892697	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	183	1529	20.0	-39	True	AATAAA	-18
PB.2314.25	chr11	-	4863	24	novel_in_catalog	HYOU1	novel	4529	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	379443	junction_23	298589.4781280143	NA	2	NA	TRUE	NA	NA	NA	C	coding	527	1584	1878	3461	15.0	-9	True	AATAAA	-13
PB.8689.6	chr4	+	3656	15	novel_not_in_catalog	TBC1D14	novel	663	2	NA	NA	-52	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	151544.18946320977	NA	1	NA	TRUE	NA	NA	NA	C	coding	693	2082	177	2258	20.0	-33	True	AATAAA	-19
PB.8689.7	chr4	+	4905	13	novel_in_catalog	TBC1D14	novel	663	2	NA	NA	-50	-1	no_combination_of_known_junctions	FALSE	canonical	1	23849	junction_9	159236.17101779897	NA	1	1	TRUE	NA	NA	NA	C	coding	669	2010	175	2184	20.0	-31	True	AATAAA	-19
PB.578.7	chr1	+	1872	15	full-splice_match	RNPC3	ENST00000423855.6	1872	15	-6	6	-6	-6	multi-exon	FALSE	canonical	1	19556	junction_12	70907.6092661199	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	107	1660	35.0	-1	True	AATAAA	-15
PB.11048.2	chr8	+	4273	14	full-splice_match	DPYSL2	ENST00000311151.9	4603	14	54	276	54	-271	multi-exon	TRUE	canonical	1	617123	junction_1	205323.83420957418	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	359	2077	35.0	-2348	False	AATAAA	-21
PB.11331.1	chr8	+	2152	2	full-splice_match	RNF139	ENST00000303545.3	2637	2	469	16	469	-16	multi-exon	FALSE	canonical	1	318600	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	537	1614	285	1898	50.0	-17	True	AATAAA	-22
PB.10864.23	chr7	-	4126	14	novel_in_catalog	WDR91	novel	4500	15	NA	NA	25	12	intron_retention	FALSE	canonical	1	112643	junction_8	36490.76701475929	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	2231	3745	15.0	8	True	AAAAAG	-21
PB.5814.3	chr19	+	2645	8	novel_in_catalog	BABAM1	novel	1470	9	NA	NA	1	-3	intron_retention	FALSE	canonical	1	956777	junction_1	231526.08690528473	NA	4	NA	TRUE	NA	NA	NA	C	coding	329	990	1370	2359	35.0	-5	True	AATAAA	-15
PB.5814.2	chr19	+	1385	9	full-splice_match	BABAM1	ENST00000598188.5	1470	9	88	-3	1	1	multi-exon	FALSE	canonical	1	664086	junction_1	273267.7729732037	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	104	1093	30.0	-5	True	AATAAA	-21
PB.5814.1	chr19	+	1425	9	full-splice_match	BABAM1	ENST00000359435.8	1472	9	49	-2	-2	0	multi-exon	FALSE	canonical	1	205518	junction_1	384995.8462373125	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	145	1134	30.0	-8	True	AATAAA	-20
PB.11048.1	chr8	+	4404	14	full-splice_match	DPYSL2	ENST00000311151.9	4603	14	195	4	195	1	multi-exon	FALSE	canonical	1	617123	junction_1	205323.83420957418	NA	1	NA	TRUE	NA	NA	NA	C	coding	572	1719	218	1936	15.0	-5	True	AATAAA	-19
PB.9254.3	chr5	-	2852	11	full-splice_match	TRIM23	ENST00000231524.13	4186	11	316	1018	-10	-522	multi-exon	FALSE	canonical	1	110375	junction_8	26953.583056803414	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	57	1781	80.0	-11	True	NA	NA
PB.5814.4	chr19	+	2721	9	novel_in_catalog	BABAM1	novel	1470	9	NA	NA	2	-2	intron_retention	FALSE	canonical	1	8133	junction_7	553244.5061812069	NA	2	NA	TRUE	NA	NA	NA	C	coding	262	789	1349	2137	35.0	16	True	AATAAA	-16
PB.5909.1	chr19	+	1055	2	full-splice_match	CEBPG	ENST00000284000.8	4109	2	358	2696	358	-2696	multi-exon	FALSE	canonical	1	272930	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	305	757	35.0	3	True	AATAAA	-13
PB.5909.2	chr19	+	3709	2	full-splice_match	CEBPG	ENST00000284000.8	4109	2	392	8	392	-8	multi-exon	FALSE	canonical	1	272930	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	271	723	30.0	-10	True	AATAAA	-13
PB.1073.13	chr1	+	6770	21	novel_not_in_catalog	SRGAP2	novel	1108	3	NA	NA	-206	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	100469.9879212693	NA	6	1	TRUE	NA	NA	NA	C	coding	518	1557	552	2108	20.0	NA	False	AATAAA	-18
PB.6414.43	chr2	-	2465	15	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	85	-2929	any annotated donor/acceptor	FALSE	canonical	1	7783	junction_1	141651.68421857606	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	224	1774	80.0	19	True	NA	NA
PB.6414.42	chr2	-	1695	16	novel_in_catalog	EIF2AK2	novel	10042	17	NA	NA	53	-137	combination_of_known_junctions	FALSE	canonical	1	38791	junction_15	107969.3189132707	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1524	172	1695	55.0	-13	True	NA	NA
PB.6414.41	chr2	-	1806	17	novel_not_in_catalog	EIF2AK2	novel	10042	17	NA	NA	84	-137	any annotated donor/acceptor	FALSE	canonical	1	6368	junction_2	155858.4529980248	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	225	1721	55.0	18	True	NA	NA
PB.6414.40	chr2	-	1757	16	incomplete-splice_match	EIF2AK2	ENST00000233057.8	10042	17	90	8273	75	-137	3prime_fragment	FALSE	canonical	1	57657	junction_15	104125.91817295058	NA	1	1	TRUE	NA	NA	NA	C	coding	508	1524	234	1757	55.0	9	True	NA	NA
PB.6750.6	chr2	-	1744	3	novel_in_catalog	LYPD1	novel	1891	3	NA	NA	0	-181	combination_of_known_junctions	FALSE	canonical	1	7707	junction_2	65841.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	112	339	1403	1741	60.0	-1	True	AGTAAA	-3
PB.11284.37	chr8	-	3136	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	161	any annotated donor/acceptor	FALSE	canonical	1	43126	junction_7	582959.9439840042	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	1389	2231	25.0	-1	True	AGTAAA	-12
PB.11764.1	chr9	+	6744	16	novel_not_in_catalog	DAB2IP	novel	1006	6	NA	NA	1231	0	intron_retention	FALSE	canonical	1	6997	junction_1	95261.47115097944	NA	1	NA	TRUE	NA	NA	NA	A	coding	1125	3378	337	3714	20.0	-123	False	ATTAAA	-19
PB.6709.7	chr2	-	2345	24	full-splice_match	CCDC93	ENST00000376300.6	6899	24	35	4519	35	308	multi-exon	FALSE	canonical	1	120919	junction_23	38949.64524028487	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	104	1999	40.0	-29	True	AATAAA	-21
PB.6709.6	chr2	-	2748	24	full-splice_match	CCDC93	ENST00000376300.6	6899	24	35	4116	35	711	multi-exon	FALSE	canonical	1	120919	junction_23	38949.64524028487	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	104	1999	25.0	-29	True	AATAAA	-19
PB.6709.5	chr2	-	3842	23	novel_in_catalog	CCDC93	novel	6899	24	NA	NA	63	711	intron_retention	FALSE	canonical	1	120919	junction_22	39030.94365655376	NA	1	NA	TRUE	NA	NA	NA	C	coding	548	1647	76	1722	25.0	-1	True	AATAAA	-19
PB.6964.13	chr2	+	3954	17	novel_in_catalog	NRP2	novel	1531	4	NA	NA	-17	-5	combination_of_known_junctions	FALSE	canonical	1	8177	junction_16	62983.310225681016	NA	1	NA	TRUE	NA	NA	NA	C	coding	901	2706	624	3329	10.0	-3008	False	NA	NA
PB.6709.3	chr2	-	3662	1	incomplete-splice_match	CCDC93	ENST00000376300.6	6899	24	94898	96	16603	-96	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	NA	False	NA	NA
PB.6709.2	chr2	-	6741	24	full-splice_match	CCDC93	ENST00000376300.6	6899	24	63	95	63	-95	multi-exon	FALSE	canonical	1	120919	junction_23	38949.64524028487	NA	4	NA	TRUE	NA	NA	NA	C	coding	631	1896	76	1971	25.0	-1	True	NA	NA
PB.6964.16	chr2	+	3585	15	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	0	2938	intron_retention	FALSE	non_canonical	0	0	junction_14	53721.99640766816	NA	3	NA	TRUE	NA	NA	NA	C	coding	817	2454	792	3245	30.0	-1	True	AATAAA	-22
PB.6964.17	chr2	+	4722	16	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	0	2934	intron_retention	FALSE	canonical	1	227	junction_15	58306.54517366715	NA	3	NA	TRUE	NA	NA	NA	C	coding	820	2463	791	3253	20.0	0	True	AATAAA	-18
PB.6964.18	chr2	+	4638	16	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	0	2937	intron_retention	FALSE	canonical	1	22	junction_15	58345.49349711785	NA	1	1	TRUE	NA	NA	NA	C	coding	820	2463	791	3253	25.0	0	True	AATAAA	-21
PB.6964.19	chr2	+	4529	17	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	0	2926	any annotated donor/acceptor	FALSE	canonical	1	227	junction_16	64190.681604692436	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	606	3068	30.0	0	True	AATAAA	-10
PB.6750.2	chr2	-	1899	3	full-splice_match	LYPD1	ENST00000345008.6	1033	3	69	-935	69	1	multi-exon	FALSE	canonical	1	31647	junction_2	53871.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	63	192	175	366	20.0	-14	True	ATTAAA	-17
PB.6709.9	chr2	-	3371	14	novel_in_catalog	CCDC93	novel	6899	24	NA	NA	47	-1457	combination_of_known_junctions	FALSE	canonical	1	22850	junction_1	54446.172926833875	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	92	1183	35.0	-17	True	ATTAAA	-24
PB.6709.8	chr2	-	1764	22	incomplete-splice_match	CCDC93	ENST00000376300.6	6899	24	102	20017	102	3	3prime_fragment	FALSE	canonical	1	120919	junction_21	35473.61361763093	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1728	37	1764	10.0	38	True	AATGAA	-2
PB.7482.4	chr21	-	2326	14	novel_in_catalog	CCT8	novel	556	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	485730	junction_13	911756.925633954	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	1038	2180	35.0	-10	True	AATAAA	-16
PB.7482.5	chr21	-	2139	15	novel_in_catalog	CCT8	novel	556	4	NA	NA	-26	0	no_combination_of_known_junctions	FALSE	canonical	1	6441	junction_14	968041.7802826389	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	509	1993	35.0	-36	True	AATAAA	-16
PB.7482.6	chr21	-	1927	14	novel_in_catalog	CCT8	novel	556	4	NA	NA	-11	0	intron_retention	FALSE	canonical	1	354074	junction_10	957738.0326996935	NA	3	NA	TRUE	NA	NA	NA	C	coding	345	1038	61	1098	35.0	-21	True	AATAAA	-16
PB.7482.7	chr21	-	1991	16	novel_not_in_catalog	CCT8	novel	556	4	NA	NA	-10	0	any annotated donor/acceptor	FALSE	canonical	1	14291	junction_8	1014668.1112796682	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	994	1845	35.0	-20	True	AATAAA	-16
PB.2470.1	chr12	-	3626	1	incomplete-splice_match	LRP6	ENST00000261349.8	10020	23	147152	10	12170	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	102	309	1173	1481	40.0	-315	False	AATAAA	-8
PB.2470.2	chr12	-	2601	1	incomplete-splice_match	LRP6	ENST00000261349.8	10020	23	148177	10	13195	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	102	309	148	456	40.0	710	False	AATAAA	-8
PB.7482.3	chr21	-	3426	15	incomplete-splice_match	CCT8	ENST00000626972.2	1862	16	-293	0	-5	0	intron_retention	FALSE	canonical	1	17510	junction_14	966923.7857547016	NA	2	NA	TRUE	NA	NA	NA	C	coding	529	1590	1691	3280	35.0	-15	True	AATAAA	-16
PB.7482.8	chr21	-	1870	16	novel_in_catalog	CCT8	novel	556	4	NA	NA	9	0	no_combination_of_known_junctions	FALSE	canonical	1	11720	junction_15	994573.2691796931	NA	1	1	TRUE	NA	NA	NA	C	coding	529	1590	135	1724	35.0	-1	True	AATAAA	-16
PB.7482.9	chr21	-	1840	15	full-splice_match	CCT8	ENST00000470450.5	1872	15	27	5	3	0	multi-exon	FALSE	canonical	1	11186	junction_14	967561.65402521	NA	0	NA	TRUE	NA	NA	NA	C	coding	494	1485	210	1694	35.0	17	True	AATAAA	-16
PB.7209.5	chr20	-	1987	8	novel_in_catalog	APMAP	novel	2117	10	NA	NA	-107	-20	no_combination_of_known_junctions	FALSE	canonical	1	69361	junction_1	369317.07757349726	NA	2	NA	TRUE	NA	NA	NA	C	coding	289	870	62	931	20.0	0	True	AATAAA	-14
PB.7826.19	chr22	+	3898	14	incomplete-splice_match	SREBF2	ENST00000361204.8	5240	19	42318	1	-8	0	5prime_fragment	FALSE	canonical	1	662917	junction_8	182722.1078025932	NA	0	NA	TRUE	NA	NA	NA	C	coding	711	2136	116	2251	15.0	-249	False	AATAAA	-22
PB.7209.7	chr20	-	2394	10	novel_not_in_catalog	APMAP	novel	2117	10	NA	NA	-107	-21	any annotated donor/acceptor	FALSE	canonical	1	4102	junction_2	483430.27278945193	NA	1	NA	TRUE	NA	NA	NA	C	coding	397	1194	62	1255	20.0	0	True	AATAAA	-13
PB.7209.6	chr20	-	2553	9	novel_in_catalog	APMAP	novel	2117	10	NA	NA	-105	-21	intron_retention	FALSE	canonical	1	5704	junction_1	400263.92853895476	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	60	1331	20.0	2	True	AATAAA	-13
PB.7209.1	chr20	-	7081	8	novel_in_catalog	APMAP	novel	2117	10	NA	NA	-139	-20	intron_retention	FALSE	canonical	1	878882	junction_7	156784.2225496233	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	94	1182	20.0	0	True	AATAAA	-14
PB.7209.3	chr20	-	2160	9	full-splice_match	APMAP	ENST00000217456.2	2430	9	250	20	-87	-20	multi-exon	FALSE	canonical	1	878882	junction_8	149634.43483197433	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	42	1292	20.0	20	True	AATAAA	-14
PB.7209.2	chr20	-	2717	8	novel_in_catalog	APMAP	novel	2117	10	NA	NA	-108	-20	intron_retention	FALSE	canonical	1	878882	junction_7	156031.64665423697	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	63	779	20.0	-1	True	AATAAA	-14
PB.7826.10	chr22	+	4386	20	full-splice_match	SREBF2	ENST00000612482.4	5365	20	42	937	16	-936	multi-exon	FALSE	canonical	1	19064	junction_10	329091.0506869379	NA	3	NA	TRUE	NA	NA	NA	C	coding	684	2055	151	2205	10.0	10	True	AATAAA	-15
PB.7826.11	chr22	+	1879	4	incomplete-splice_match	SREBF2	ENST00000361204.8	5240	19	17	35410	17	-5468	3prime_fragment	FALSE	canonical	1	741201	junction_3	162854.93856258158	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	150	1109	85.0	11	True	NA	NA
PB.7826.12	chr22	+	4972	20	novel_not_in_catalog	SREBF2	novel	5365	20	NA	NA	18	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	269792.56013724173	NA	13	NA	TRUE	NA	NA	NA	C	coding	1059	3180	149	3328	20.0	12	True	AATAAA	-19
PB.7826.13	chr22	+	1840	9	novel_not_in_catalog	SREBF2	novel	5365	20	NA	NA	19	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	355876.8534513554	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	148	1659	20.0	13	True	AATAAA	-19
PB.7826.14	chr22	+	4984	19	novel_not_in_catalog	SREBF2	novel	5365	20	NA	NA	20	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	276714.17880750366	NA	5	1	TRUE	NA	NA	NA	C	coding	991	2976	365	3340	20.0	14	True	AATAAA	-19
PB.10975.1	chr8	-	2882	3	full-splice_match	MFHAS1	ENST00000276282.6	6414	3	1123	2409	1123	-4	multi-exon	FALSE	canonical	1	224918	junction_2	681.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	797	2394	230	2623	90.0	1097	False	NA	NA
PB.6406.16	chr2	+	2033	7	incomplete-splice_match	RASGRP3	ENST00000403687.7	4807	18	419	41433	-2	1196	3prime_fragment	FALSE	canonical	1	148282	junction_1	33988.21032194677	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	322	1083	65.0	-2	True	NA	NA
PB.644.4	chr1	+	4724	23	full-splice_match	TTF2	ENST00000369466.8	9462	23	20	4718	20	373	multi-exon	FALSE	canonical	1	100507	junction_2	47146.29669794414	NA	2	1	TRUE	NA	NA	NA	C	coding	1162	3489	25	3513	50.0	-4	True	NA	NA
PB.644.5	chr1	+	4172	24	novel_not_in_catalog	TTF2	novel	9462	23	NA	NA	0	505	any annotated donor/acceptor	FALSE	canonical	1	26145	junction_23	58527.811866584925	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	45	3533	35.0	-2126	False	NA	NA
PB.644.6	chr1	+	4503	22	novel_in_catalog	TTF2	novel	9462	23	NA	NA	12	295	intron_retention	FALSE	canonical	1	6625	junction_10	63364.88646824664	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	33	1958	25.0	-12	True	NA	NA
PB.644.7	chr1	+	4884	23	full-splice_match	TTF2	ENST00000369466.8	9462	23	13	4565	13	526	multi-exon	FALSE	canonical	1	100507	junction_2	47146.29669794414	NA	2	NA	TRUE	NA	NA	NA	C	coding	1162	3489	32	3520	20.0	-11	True	NA	NA
PB.644.1	chr1	+	2876	10	incomplete-splice_match	TTF2	ENST00000369466.8	9462	23	-16	24593	-16	6471	3prime_fragment	FALSE	canonical	1	100507	junction_2	43092.33949137023	NA	6	NA	TRUE	NA	NA	NA	C	coding	676	2031	61	2091	40.0	-2142	False	AATAAA	-20
PB.644.2	chr1	+	4258	24	novel_in_catalog	TTF2	novel	9462	23	NA	NA	-15	503	combination_of_known_junctions	FALSE	canonical	1	24100	junction_23	58785.58122195463	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	60	3548	35.0	-2141	False	NA	NA
PB.644.3	chr1	+	1927	10	novel_not_in_catalog	TTF2	novel	9462	23	NA	NA	-11	5506	any annotated donor/acceptor	FALSE	canonical	1	16417	junction_7	66157.90830717252	NA	2	NA	TRUE	NA	NA	NA	C	coding	624	1872	56	1927	70.0	-2137	False	NA	NA
PB.644.8	chr1	+	3973	23	full-splice_match	TTF2	ENST00000369466.8	9462	23	15	5474	15	230	multi-exon	FALSE	canonical	1	100507	junction_2	47146.29669794414	NA	0	NA	TRUE	NA	NA	NA	C	coding	1162	3489	30	3518	65.0	-9	True	NA	NA
PB.644.9	chr1	+	1866	10	incomplete-splice_match	TTF2	ENST00000369466.8	9462	23	29	25558	29	5506	3prime_fragment	FALSE	canonical	1	100507	junction_2	43092.33949137023	NA	3	2	TRUE	NA	NA	NA	C	coding	617	1851	16	1866	70.0	5	True	NA	NA
PB.10150.2	chr6	+	1922	9	novel_in_catalog	SMPD2	novel	1645	10	NA	NA	67	-1	intron_retention	FALSE	canonical	1	135165	junction_1	28527.23546783845	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	953	1909	5.0	-14	True	AATAAA	-13
PB.10150.1	chr6	+	1564	10	full-splice_match	SMPD2	ENST00000258052.7	1645	10	80	1	80	-1	multi-exon	FALSE	canonical	1	135165	junction_1	28998.693412881916	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	280	1551	5.0	-1	True	AATAAA	-13
PB.11236.9	chr8	-	3321	4	full-splice_match	RBM12B	ENST00000520560.5	588	4	-28	-2705	5	66	multi-exon	FALSE	canonical	1	39045	junction_3	32367.595740184348	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	250	3255	35.0	0	True	AGTAAA	-14
PB.7110.12	chr2	+	3437	13	full-splice_match	SEPT2	ENST00000391973.6	3701	13	263	1	8	-1	multi-exon	FALSE	canonical	1	143734	junction_1	877506.3100936939	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	266	1351	25.0	8	True	AATAAA	-19
PB.7110.13	chr2	+	3567	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5756	junction_2	1085744.6155329417	NA	2	1	TRUE	NA	NA	NA	C	coding	361	1086	395	1480	25.0	-5	True	AATAAA	-20
PB.7110.10	chr2	+	1999	13	full-splice_match	SEPT2	ENST00000391973.6	3701	13	231	1471	-24	-73	multi-exon	FALSE	canonical	1	143734	junction_1	877506.3100936939	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	298	1383	40.0	-2223	False	AATAAA	-18
PB.7110.11	chr2	+	3302	11	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	3470	junction_1	971653.1528483813	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	631	1215	25.0	-3	True	AATAAA	-20
PB.7110.16	chr2	+	3274	12	full-splice_match	SEPT2	ENST00000407971.5	3267	12	-11	4	-3	-1	multi-exon	FALSE	canonical	1	19559	junction_1	936780.78549904	NA	1	1	TRUE	NA	NA	NA	C	coding	321	966	223	1188	25.0	-1682	False	AATAAA	-19
PB.7110.17	chr2	+	5498	10	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	2	1	intron_retention	FALSE	canonical	1	634146	junction_4	888069.7927953524	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	2826	3410	20.0	-1677	False	AATAAA	-21
PB.7110.14	chr2	+	3339	14	full-splice_match	SEPT2	ENST00000402092.6	3333	14	-10	4	-3	-1	multi-exon	FALSE	canonical	1	7694	junction_1	1028736.5949458095	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	168	1253	25.0	-28	True	AATAAA	-19
PB.7110.15	chr2	+	1992	12	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	2	-73	intron_retention	FALSE	canonical	1	634146	junction_6	811219.5467521581	NA	2	1	TRUE	NA	NA	NA	C	coding	194	585	792	1376	40.0	0	True	AATAAA	-18
PB.9401.6	chr5	-	3901	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	154	-298	17	298	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	228	902	15.0	-10	True	AGTAAA	-22
PB.7110.19	chr2	+	3638	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	13151	junction_3	1175125.4594462153	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	586	1551	25.0	-56	True	AATAAA	-20
PB.10424.9	chr7	+	1963	6	full-splice_match	ABCB5	ENST00000443026.6	2247	6	28	256	28	-256	multi-exon	FALSE	canonical	1	11051	junction_5	2172.7356581047775	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	519	914	45.0	0	True	AATAAA	-20
PB.10424.8	chr7	+	5130	6	full-splice_match	ABCB5	ENST00000443026.6	2247	6	206	-3089	127	3089	multi-exon	FALSE	canonical	1	11051	junction_5	2172.7356581047775	NA	40	NA	TRUE	NA	NA	NA	C	coding	131	396	341	736	45.0	-38	False	NA	NA
PB.10424.7	chr7	+	6353	6	full-splice_match	ABCB5	ENST00000443026.6	2247	6	-13	-4093	0	-2836	multi-exon	FALSE	canonical	1	11051	junction_5	2172.7356581047775	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	560	955	25.0	0	True	AATAAA	-15
PB.10424.6	chr7	+	2168	6	full-splice_match	ABCB5	ENST00000443026.6	2247	6	-16	95	-3	-95	multi-exon	FALSE	canonical	1	11051	junction_5	2172.7356581047775	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	563	958	35.0	-3	True	AATATA	-27
PB.10424.5	chr7	+	2343	6	full-splice_match	ABCB5	ENST00000443026.6	2247	6	-6	-90	-6	90	multi-exon	FALSE	canonical	1	11051	junction_5	2172.7356581047775	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	553	948	25.0	-250	False	AGTAAA	-14
PB.10424.4	chr7	+	2195	7	novel_not_in_catalog	ABCB5	novel	5811	28	NA	NA	-11	14	any annotated donor/acceptor	FALSE	canonical	1	1722	junction_1	4603.915966025251	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	481	876	10.0	-268	False	ATTAAA	-29
PB.10424.3	chr7	+	4344	19	full-splice_match	ABCB5	ENST00000258738.10	2906	19	-103	-1335	-11	-50	multi-exon	FALSE	canonical	1	1325	junction_14	4795.898998166796	NA	2	NA	TRUE	NA	NA	NA	C	coding	812	2439	571	3009	25.0	-268	False	ATTAAA	-14
PB.10424.2	chr7	+	2016	7	novel_in_catalog	ABCB5	novel	5811	28	NA	NA	-11	-95	combination_of_known_junctions	FALSE	canonical	1	515	junction_1	5013.6008156702	NA	3	1	TRUE	NA	NA	NA	C	coding	131	396	411	806	35.0	-268	False	AATATA	-27
PB.10424.1	chr7	+	1947	7	novel_in_catalog	ABCB5	novel	5811	28	NA	NA	-97	-250	combination_of_known_junctions	FALSE	canonical	1	515	junction_1	5013.6008156702	NA	1	NA	TRUE	NA	NA	NA	C	coding	131	396	497	892	35.0	-354	False	AATAAA	-26
PB.8875.6	chr4	+	3446	22	novel_in_catalog	HERC6	novel	3473	20	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1361	junction_8	34064.34017536177	NA	0	NA	TRUE	NA	NA	NA	C	coding	614	1845	966	2810	25.0	37	True	NA	NA
PB.2565.3	chr12	-	6470	15	novel_in_catalog	SLC38A2	novel	4888	16	NA	NA	0	2	intron_retention	TRUE	canonical	1	1365104	junction_11	371101.1273459413	NA	5	NA	TRUE	NA	NA	NA	C	coding	183	552	367	918	10.0	-1	True	AATAAA	-19
PB.2565.1	chr12	-	4681	15	full-splice_match	SLC38A2	ENST00000549258.5	4384	15	-3	-294	-1	2	multi-exon	FALSE	canonical	1	94002	junction_12	604265.2309954163	NA	2	1	TRUE	NA	NA	NA	C	coding	406	1221	537	1757	10.0	-2	True	AATAAA	-19
PB.2565.6	chr12	-	4674	16	full-splice_match	SLC38A2	ENST00000256689.9	4888	16	212	2	116	-2	multi-exon	FALSE	canonical	1	1365104	junction_12	365553.6269711949	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	249	1754	15.0	144	False	AATAAA	-15
PB.5056.5	chr17	-	4421	5	incomplete-splice_match	PLEKHM1	ENST00000430334.7	5263	12	-10	29340	-5	3006	3prime_fragment	FALSE	canonical	1	76116	junction_4	30603.348324774855	NA	2	NA	TRUE	NA	NA	NA	C	coding	458	1377	145	1521	5.0	-34	False	NA	NA
PB.5056.4	chr17	-	3728	12	full-splice_match	PLEKHM1	ENST00000430334.7	5263	12	-13	1548	-8	23	multi-exon	FALSE	canonical	1	30570	junction_7	48436.56664474247	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	148	3318	35.0	-37	False	ATTAAA	-40
PB.6311.2	chr2	-	2344	11	novel_in_catalog	ODC1	novel	2653	12	NA	NA	-18	218	intron_retention	FALSE	canonical	1	928091	junction_10	914303.9389745622	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	1005	2003	15.0	-1	True	AATAAA	-20
PB.5056.1	chr17	-	5444	13	novel_in_catalog	PLEKHM1	novel	5263	12	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	4390	junction_9	60872.581936688766	NA	3	NA	TRUE	NA	NA	NA	C	coding	926	2781	707	3487	15.0	-20	False	AGTAAA	-19
PB.5056.3	chr17	-	3913	13	novel_in_catalog	PLEKHM1	novel	5263	12	NA	NA	-5	25	no_combination_of_known_junctions	FALSE	canonical	1	4390	junction_9	60872.581936688766	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	721	3501	40.0	-34	False	ATTAAA	-42
PB.5056.2	chr17	-	5295	12	full-splice_match	PLEKHM1	ENST00000430334.7	5263	12	-33	1	-28	-1	multi-exon	FALSE	canonical	1	30570	junction_7	48436.56664474247	NA	2	NA	TRUE	NA	NA	NA	C	coding	1056	3171	168	3338	15.0	-57	False	AGTAAA	-19
PB.8620.3	chr3	-	3097	11	full-splice_match	UBXN7	ENST00000296328.8	10568	11	47	7424	0	-209	multi-exon	FALSE	canonical	1	174043	junction_4	50744.9390103092	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	29	1498	70.0	-1	True	NA	NA
PB.8620.2	chr3	-	3343	11	full-splice_match	UBXN7	ENST00000296328.8	10568	11	38	7187	-6	28	multi-exon	FALSE	canonical	1	174043	junction_4	50744.9390103092	NA	2	NA	TRUE	NA	NA	NA	C	coding	489	1470	38	1507	30.0	-10	True	NA	NA
PB.8620.1	chr3	-	4730	11	full-splice_match	UBXN7	ENST00000296328.8	10568	11	0	5838	0	1377	multi-exon	FALSE	canonical	1	174043	junction_4	50744.9390103092	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	76	1545	85.0	-48	False	NA	NA
PB.7112.10	chr2	+	2391	18	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	-4	-4	any annotated donor/acceptor	FALSE	canonical	1	481	junction_17	49356.0698955694	NA	2	NA	TRUE	NA	NA	NA	C	coding	697	2094	129	2222	30.0	0	True	AATATA	-18
PB.8620.6	chr3	-	2732	4	full-splice_match	UBXN7	ENST00000493566.1	921	4	-4	-1807	-1	1807	multi-exon	FALSE	canonical	1	9874	junction_1	84892.30468462183	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	33	356	55.0	-5	True	NA	NA
PB.8620.5	chr3	-	2121	11	full-splice_match	UBXN7	ENST00000296328.8	10568	11	27	8420	-17	536	multi-exon	FALSE	canonical	1	174043	junction_4	50744.9390103092	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	49	1518	20.0	-21	True	NA	NA
PB.8620.4	chr3	-	2964	11	full-splice_match	UBXN7	ENST00000296328.8	10568	11	29	7575	-15	-360	multi-exon	FALSE	canonical	1	174043	junction_4	50744.9390103092	NA	1	NA	TRUE	NA	NA	NA	C	coding	489	1470	47	1516	65.0	-19	True	NA	NA
PB.11878.2	chr9	-	4114	4	novel_not_in_catalog	MED22	novel	4367	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	1002	junction_2	121675.0730620971	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	919	1458	5.0	-21	True	ATTAAA	-19
PB.11878.1	chr9	-	3832	4	full-splice_match	MED22	ENST00000610888.4	3867	4	35	0	-7	0	multi-exon	FALSE	canonical	1	123713	junction_3	74615.51986461441	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	200	622	5.0	13	True	ATTAAA	-20
PB.11878.6	chr9	-	3247	5	novel_not_in_catalog	MED22	novel	4367	5	NA	NA	4	-2	any annotated donor/acceptor	TRUE	canonical	1	99	junction_1	117565.09960735583	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	231	653	5.0	-18	True	ATTAAA	-17
PB.11878.5	chr9	-	3851	4	full-splice_match	MED22	ENST00000457204.2	561	4	8	-3298	0	-1	multi-exon	FALSE	canonical	1	13774	junction_3	125766.68792207613	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	221	643	5.0	-28	True	ATTAAA	-18
PB.11878.4	chr9	-	3120	5	novel_not_in_catalog	MED22	novel	4367	5	NA	NA	-19	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	117600.91407063977	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	212	634	5.0	1	True	ATTAAA	-19
PB.6911.6	chr2	+	3798	31	full-splice_match	MYO1B	ENST00000392318.7	5082	31	3	1281	3	66	multi-exon	FALSE	canonical	1	141532	junction_23	164409.09662783938	NA	0	NA	TRUE	NA	NA	NA	C	coding	1136	3411	245	3655	30.0	-16	True	AATAAA	-17
PB.6911.7	chr2	+	4852	31	full-splice_match	MYO1B	ENST00000392318.7	5082	31	6	224	6	-224	multi-exon	FALSE	canonical	1	141532	junction_23	164409.09662783938	NA	0	NA	TRUE	NA	NA	NA	C	coding	1136	3411	242	3652	30.0	-13	True	AATAAA	-20
PB.6911.4	chr2	+	5083	31	full-splice_match	MYO1B	ENST00000392318.7	5082	31	-1	0	-1	0	multi-exon	FALSE	canonical	1	141532	junction_23	164409.09662783938	NA	1	NA	TRUE	NA	NA	NA	C	coding	1136	3411	249	3659	15.0	-20	True	CATAAA	-12
PB.8849.1	chr4	+	1782	6	full-splice_match	ENOPH1	ENST00000273920.7	2025	6	242	1	142	0	multi-exon	FALSE	canonical	1	395505	junction_1	89572.7980261865	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	27	812	25.0	-1	True	AATAAA	-19
PB.6911.2	chr2	+	4979	30	novel_in_catalog	MYO1B	novel	572	6	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	108124	junction_22	161051.67680723144	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	232	3555	15.0	-3	True	CATAAA	-12
PB.6911.3	chr2	+	4920	29	full-splice_match	MYO1B	ENST00000339514.8	5026	29	101	5	-12	0	multi-exon	FALSE	canonical	1	212641	junction_1	137695.48416470323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1078	3237	260	3496	15.0	-102	False	CATAAA	-12
PB.6911.1	chr2	+	4674	29	full-splice_match	MYO1B	ENST00000339514.8	5026	29	129	223	16	-218	multi-exon	FALSE	canonical	1	212641	junction_1	137695.48416470323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1078	3237	232	3468	30.0	-3	True	AATAAA	-26
PB.7043.10	chr2	-	2202	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-9	any annotated donor/acceptor	FALSE	canonical	1	331	junction_9	797905.8959687718	NA	1	1	TRUE	NA	NA	NA	C	coding	397	1194	304	1497	45.0	-1	True	AATAAA	-15
PB.7043.13	chr2	-	1605	7	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	0	-9	no_combination_of_known_junctions	FALSE	canonical	1	335	junction_6	926173.0188898143	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	193	900	45.0	-3	True	AATAAA	-15
PB.7043.15	chr2	-	7075	7	novel_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-9	intron_retention	FALSE	canonical	1	893005	junction_6	413423.1805054262	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	211	1248	45.0	-1	True	AATAAA	-15
PB.6911.8	chr2	+	3620	29	full-splice_match	MYO1B	ENST00000339514.8	5026	29	119	1287	6	65	multi-exon	FALSE	canonical	1	212641	junction_1	137695.48416470323	NA	0	NA	TRUE	NA	NA	NA	C	coding	1078	3237	242	3478	35.0	-13	True	AATAAA	-16
PB.6911.9	chr2	+	4756	30	novel_in_catalog	MYO1B	novel	572	6	NA	NA	15	-224	combination_of_known_junctions	FALSE	canonical	1	108124	junction_22	161051.67680723144	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	233	3556	30.0	-4	True	AATAAA	-20
PB.8428.1	chr3	-	4762	23	full-splice_match	PIK3CB	ENST00000477593.5	4658	23	-157	53	8	-3	multi-exon	FALSE	canonical	1	13511	junction_22	57659.792271167025	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	250	3444	40.0	-22	True	ATTAAA	-26
PB.8428.3	chr3	-	4886	24	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	92879	junction_23	49622.31868144868	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	373	3567	45.0	25	False	ATTAAA	-27
PB.8428.5	chr3	-	4881	23	novel_not_in_catalog	PIK3CB	novel	5919	22	NA	NA	75	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	81097.52990094782	NA	9	NA	TRUE	NA	NA	NA	C	coding	1047	3144	367	3510	10.0	275	False	AATAAA	-33
PB.8428.4	chr3	-	4808	23	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	11	-8	combination_of_known_junctions	FALSE	canonical	1	11643	junction_12	62883.93083070646	NA	0	NA	TRUE	NA	NA	NA	C	coding	1047	3144	352	3495	20.0	-19	True	ATTAAA	-21
PB.838.9	chr1	-	4215	9	novel_not_in_catalog	FCRL5	novel	5390	17	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	3312	junction_1	19989.662920807343	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	151	1893	10.0	-36	True	NA	NA
PB.8428.6	chr3	-	4747	23	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	1243	junction_17	64406.84200348259	NA	5	2	TRUE	NA	NA	NA	C	coding	1007	3024	353	3376	10.0	-20	True	AATAAA	-33
PB.8428.9	chr3	-	5037	25	novel_not_in_catalog	PIK3CB	novel	5919	22	NA	NA	29	0	any annotated donor/acceptor	FALSE	canonical	1	341	junction_23	81169.64282954797	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3192	475	3666	10.0	-1	True	AATAAA	-33
PB.8428.8	chr3	-	5033	25	novel_not_in_catalog	PIK3CB	novel	5919	22	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_22	72466.09821131687	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	468	3662	10.0	28	False	AATAAA	-33
PB.838.5	chr1	-	2843	10	full-splice_match	FCRL5	ENST00000368190.7	2800	10	-45	2	20	-2	multi-exon	FALSE	canonical	1	5252	junction_8	17349.227153954325	NA	0	NA	TRUE	NA	NA	NA	C	coding	759	2280	139	2418	25.0	-24	True	ATTAAA	-17
PB.1929.1	chr11	-	1388	5	full-splice_match	SPI1	ENST00000227163.8	1168	5	-168	-52	17	-1	multi-exon	FALSE	canonical	1	316069	junction_4	249103.78606353517	NA	0	NA	TRUE	NA	NA	NA	A	coding	265	798	225	1022	25.0	4980	False	AGTAAA	-15
PB.838.3	chr1	-	5089	16	novel_in_catalog	FCRL5	novel	2620	2	NA	NA	20	-1	no_combination_of_known_junctions	FALSE	canonical	1	1898	junction_7	17500.595912393637	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	139	2793	15.0	-24	True	NA	NA
PB.838.2	chr1	-	5389	17	full-splice_match	FCRL5	ENST00000361835.7	5390	17	0	1	0	0	multi-exon	FALSE	canonical	1	5252	junction_15	15538.840824964833	NA	0	NA	TRUE	NA	NA	NA	C	coding	977	2934	159	3092	15.0	-44	True	NA	NA
PB.838.1	chr1	-	5127	16	novel_in_catalog	FCRL5	novel	2620	2	NA	NA	8	0	no_combination_of_known_junctions	FALSE	canonical	1	248	junction_14	16567.80671784893	NA	0	NA	TRUE	NA	NA	NA	C	coding	892	2679	151	2829	10.0	-36	True	NA	NA
PB.10969.9	chr8	+	2716	14	full-splice_match	MCPH1	ENST00000344683.9	8039	14	55	5268	4	-134	multi-exon	FALSE	canonical	1	63926	junction_13	37732.177476895355	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	22	2529	15.0	20	True	NA	NA
PB.10080.4	chr6	+	2706	2	full-splice_match	TPBG	ENST00000369750.3	6484	2	194	3584	194	-173	multi-exon	FALSE	canonical	1	273065	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	424	1686	25.0	8	True	AATAAA	-30
PB.10969.7	chr8	+	2427	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	23	467	23	210	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	50	1882	30.0	-8	True	AAGAAA	-25
PB.10969.6	chr8	+	4172	15	novel_not_in_catalog	MCPH1	novel	8039	14	NA	NA	20	2236	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	46944.68458799491	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	53	2560	100.0	-11	True	NA	NA
PB.10969.5	chr8	+	3780	14	full-splice_match	MCPH1	ENST00000344683.9	8039	14	20	4239	16	895	multi-exon	FALSE	canonical	1	63926	junction_13	37732.177476895355	NA	4	NA	TRUE	NA	NA	NA	C	coding	835	2508	57	2564	75.0	-15	True	NA	NA
PB.10969.4	chr8	+	2048	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	16	853	16	-176	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	57	1889	15.0	-15	True	GATAAA	-15
PB.10969.3	chr8	+	2970	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	42	-95	-5	95	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	31	1863	30.0	11	True	TATAAA	-21
PB.10969.2	chr8	+	1853	8	full-splice_match	MCPH1	ENST00000519480.5	2917	8	6	1058	6	-381	multi-exon	FALSE	canonical	1	98629	junction_1	28063.46116739483	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1785	67	1851	55.0	-25	True	NA	NA
PB.10969.1	chr8	+	3151	14	full-splice_match	MCPH1	ENST00000344683.9	8039	14	5	4883	1	251	multi-exon	FALSE	canonical	1	63926	junction_13	37732.177476895355	NA	1	NA	TRUE	NA	NA	NA	C	coding	835	2508	72	2579	30.0	-30	True	AATAAA	-13
PB.7057.5	chr2	+	2632	24	novel_in_catalog	SP100	novel	3882	25	NA	NA	27	-970	combination_of_known_junctions	FALSE	canonical	1	15291	junction_22	276465.5323743147	NA	0	NA	TRUE	NA	NA	NA	C	coding	839	2517	115	2631	75.0	2	True	AAAAAG	-17
PB.2571.4	chr12	+	2510	5	novel_in_catalog	TMEM106C	novel	663	7	NA	NA	0	6	intron_retention	FALSE	canonical	1	490188	junction_1	441595.59346101666	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	790	1167	5.0	0	True	AATAAA	-23
PB.2571.5	chr12	+	1410	8	full-splice_match	TMEM106C	ENST00000256686.10	1394	8	18	-34	1	5	multi-exon	FALSE	canonical	1	490188	junction_1	414335.78771379153	NA	0	NA	TRUE	NA	NA	NA	C	coding	231	696	61	756	5.0	6	True	AATAAA	-22
PB.12017.11	chrX	-	2369	18	full-splice_match	DMD	ENST00000378702.8	2617	18	-82	330	10	42	multi-exon	FALSE	canonical	1	56445	junction_17	37557.12474982675	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	111	1964	50.0	12	True	TATAAA	-16
PB.12017.10	chrX	-	3237	13	full-splice_match	DMD	ENST00000378680.6	1858	13	8	-1387	8	898	multi-exon	FALSE	canonical	1	6542	junction_4	42892.36530832795	NA	0	NA	TRUE	NA	NA	NA	C	coding	525	1578	113	1690	70.0	10	True	AATATA	-2
PB.11690.3	chr9	+	1741	3	full-splice_match	MSANTD3	ENST00000622639.4	1748	3	7	0	-1	0	multi-exon	FALSE	canonical	1	28211	junction_1	137496.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	275	828	169	996	75.0	-2178	False	NA	NA
PB.2571.1	chr12	+	1489	8	full-splice_match	TMEM106C	ENST00000552561.5	810	8	-30	-649	6	0	multi-exon	FALSE	canonical	1	490188	junction_1	396004.3775759896	NA	1	NA	TRUE	NA	NA	NA	C	coding	250	753	88	840	5.0	-21	True	AATAAA	-17
PB.2571.2	chr12	+	3865	3	incomplete-splice_match	TMEM106C	ENST00000256686.10	1394	8	-4	-28	-4	-1	intron_retention	FALSE	canonical	1	490188	junction_1	394441.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	806	1183	10.0	-16	True	AATAAA	-16
PB.2571.3	chr12	+	2980	4	novel_in_catalog	TMEM106C	novel	663	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	490188	junction_1	474011.61247120897	NA	0	NA	TRUE	NA	NA	NA	C	coding	125	378	792	1169	10.0	-2	True	AATAAA	-16
PB.8601.13	chr3	+	4406	31	full-splice_match	OPA1	ENST00000361510.7	6493	31	48	2039	6	39	multi-exon	FALSE	canonical	1	92773	junction_4	162811.10689877873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1015	3048	187	3234	30.0	-16	True	AATAAA	-30
PB.2918.15	chr12	+	4811	7	incomplete-splice_match	PTPN11	ENST00000351677.6	6101	16	63158	2	4140	-2	5prime_fragment	FALSE	canonical	1	162349	junction_2	41433.35243664081	NA	2	NA	TRUE	NA	NA	NA	C	coding	211	636	57	692	10.0	9108	False	AATAAA	-16
PB.10080.2	chr6	+	2255	3	novel_not_in_catalog	TPBG	novel	3392	3	NA	NA	165	-520	any annotated donor/acceptor	FALSE	canonical	1	6149	junction_2	133458.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	320	1582	90.0	-4	True	AATAAA	-31
PB.11931.3	chr9	-	2078	2	novel_not_in_catalog	ARRDC1-AS1	novel	1409	3	NA	NA	31	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-50	True	AATAAA	-14
PB.11931.1	chr9	-	1459	3	full-splice_match	ARRDC1-AS1	ENST00000371417.3	1409	3	-51	1	-33	-1	multi-exon	FALSE	canonical	1	115257	junction_2	4937.5	NA	4	NA	TRUE	NA	NA	NA	C	coding	176	531	593	1123	15.0	-39	True	AATAAA	-17
PB.2918.10	chr12	+	2001	16	full-splice_match	PTPN11	ENST00000351677.6	6101	16	34	4066	-11	1083	multi-exon	FALSE	canonical	1	126942	junction_7	97282.74863884598	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	165	1946	60.0	1	True	NA	NA
PB.12276.2	chrX	+	2421	5	novel_not_in_catalog	FAM122C	novel	2157	4	NA	NA	-1	-4	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	9057.210966958868	NA	2	1	TRUE	NA	NA	NA	C	coding	134	405	211	615	30.0	-7714	False	AATAAA	-13
PB.12276.3	chrX	+	2373	3	full-splice_match	FAM122C	ENST00000482240.5	665	3	-76	-1632	12	6	multi-exon	FALSE	canonical	0	0	junction_2	15540.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-8	True	AATAAA	-23
PB.12276.1	chrX	+	2102	5	novel_in_catalog	FAM122C	novel	2157	4	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	1	986	junction_1	19140.46632791375	NA	1	1	TRUE	NA	NA	NA	C	coding	115	348	157	504	70.0	-7733	False	NA	NA
PB.12276.4	chrX	+	2506	2	full-splice_match	FAM122C	ENST00000475361.1	2483	2	-20	-3	9	3	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	7	True	AATAAA	-20
PB.8713.10	chr4	-	2045	6	novel_not_in_catalog	LCORL	novel	10430	8	NA	NA	0	-11598	any annotated donor/acceptor	FALSE	canonical	1	3261	junction_1	45128.705957959835	NA	0	NA	TRUE	NA	NA	NA	C	coding	278	837	7	843	95.0	-3	True	NA	NA
PB.10177.10	chr6	+	3829	5	full-splice_match	DSE	ENST00000359564.3	3692	5	-103	-34	0	0	multi-exon	FALSE	canonical	1	18386	junction_4	55055.67155162127	NA	1	NA	TRUE	NA	NA	NA	C	coding	474	1425	1473	2897	20.0	0	True	AATAAA	-14
PB.10177.11	chr6	+	2800	4	incomplete-splice_match	DSE	ENST00000359564.3	3692	5	-103	5388	0	-2910	3prime_fragment	FALSE	canonical	1	88152	junction_2	31700.234461102787	NA	1	NA	TRUE	NA	NA	NA	C	coding	317	954	229	1182	25.0	0	True	ATTAAA	-15
PB.3625.1	chr14	+	5143	17	full-splice_match	SLC24A4	ENST00000532405.5	9950	17	-417	5224	-5	7	multi-exon	TRUE	canonical	1	5020	junction_1	4183.320503331504	NA	1	NA	TRUE	NA	NA	NA	A	coding	622	1869	644	2512	30.0	23	False	ATTAAA	-20
PB.5079.3	chr17	-	2125	6	novel_not_in_catalog	CBX1	novel	2422	5	NA	NA	41	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	131533.87450082964	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	187	744	20.0	-21	True	AATAAA	-21
PB.12327.1	chrX	-	1320	10	full-splice_match	HAUS7	ENST00000370211.8	1363	10	39	4	-5	0	multi-exon	FALSE	canonical	1	237976	junction_2	49421.97352605293	NA	0	NA	TRUE	NA	NA	NA	A	coding	358	1077	36	1112	20.0	-24	True	AAGAAA	-13
PB.8412.2	chr3	-	4073	10	full-splice_match	AMOTL2	ENST00000249883.9	4488	10	141	274	-6	37	multi-exon	FALSE	canonical	1	327349	junction_9	75662.78336290717	NA	1	NA	TRUE	NA	NA	NA	C	coding	780	2343	174	2516	80.0	-7	True	AATACA	-29
PB.3778.1	chr15	+	2186	1	full-splice_match	CHST14	ENST00000306243.6	3574	1	-19	1407	-19	36	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	376	1131	236	1366	10.0	-27	True	AATAAA	-23
PB.8412.1	chr3	-	4326	10	full-splice_match	AMOTL2	ENST00000249883.9	4488	10	141	21	-6	-18	multi-exon	FALSE	canonical	1	327349	junction_9	75662.78336290717	NA	1	NA	TRUE	NA	NA	NA	C	coding	780	2343	174	2516	75.0	-7	True	NA	NA
PB.1006.2	chr1	+	2422	5	incomplete-splice_match	RGS13	ENST00000462955.1	1465	6	10	3	10	-3	intron_retention	FALSE	canonical	1	37333	junction_2	9100.546065346849	NA	0	NA	TRUE	NA	NA	NA	C	coding	101	306	239	544	35.0	-3	True	AATAAA	-15
PB.583.8	chr1	+	3131	7	novel_not_in_catalog	PRPF38B	novel	3693	6	NA	NA	-2	111	intron_retention	FALSE	canonical	1	66880	junction_1	246205.85522784022	NA	1	NA	TRUE	NA	NA	NA	C	coding	93	282	272	553	60.0	-6	True	AAGAAA	-40
PB.10338.4	chr6	-	5530	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-10	-4	no_combination_of_known_junctions	FALSE	canonical	1	12566	junction_12	123520.72896314813	NA	4	NA	TRUE	NA	NA	NA	C	coding	1114	3345	148	3492	10.0	-3	True	AATAAA	-23
PB.7853.2	chr22	+	3359	13	novel_in_catalog	PARVG	novel	3462	14	NA	NA	-10	18	intron_retention	FALSE	canonical	1	82917	junction_1	160506.45686544824	NA	0	NA	TRUE	NA	NA	NA	B	coding	317	954	2179	3132	25.0	-7101	False	AATAAA	-16
PB.7853.3	chr22	+	1449	14	novel_in_catalog	PARVG	novel	3462	14	NA	NA	0	21	combination_of_known_junctions	FALSE	canonical	1	82917	junction_1	160192.77741547165	NA	0	NA	TRUE	NA	NA	NA	B	coding	331	996	224	1219	20.0	-7	True	AATAAA	-19
PB.7853.1	chr22	+	3828	7	novel_in_catalog	PARVG	novel	3462	14	NA	NA	-25	-5496	intron_retention	FALSE	canonical	1	82917	junction_1	118944.89421950355	NA	1	NA	TRUE	NA	NA	NA	B	coding	173	522	2194	2715	85.0	1	True	NA	NA
PB.7853.4	chr22	+	2673	14	novel_in_catalog	PARVG	novel	3462	14	NA	NA	-29	18	combination_of_known_junctions	FALSE	canonical	1	6957	junction_1	194806.93735381088	NA	0	NA	TRUE	NA	NA	NA	B	coding	317	954	1493	2446	25.0	-4	True	AATAAA	-16
PB.8610.1	chr3	-	3310	6	full-splice_match	PPP1R2	ENST00000618156.4	3450	6	62	78	29	-78	multi-exon	FALSE	canonical	1	59148	junction_1	123542.59464751418	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	300	917	15.0	0	True	ATTAAA	-23
PB.5691.1	chr19	+	1915	8	full-splice_match	C19orf66	ENST00000253110.15	2117	8	203	-1	-7	1	multi-exon	FALSE	canonical	1	154249	junction_6	122247.16044246139	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	96	971	20.0	8	True	AATAAA	-20
PB.5691.2	chr19	+	2043	7	full-splice_match	C19orf66	ENST00000585919.5	2079	7	35	1	-8	-1	multi-exon	FALSE	canonical	1	273185	junction_1	85457.1618481382	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	97	588	20.0	7	True	AATAAA	-25
PB.5691.3	chr19	+	1840	8	full-splice_match	C19orf66	ENST00000591813.5	1481	8	-42	-317	1	0	multi-exon	FALSE	canonical	1	24500	junction_6	159587.25668193345	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	131	898	20.0	-4871	False	AATAAA	-18
PB.5691.4	chr19	+	2237	9	novel_in_catalog	C19orf66	novel	1461	3	NA	NA	8	3	intron_retention	FALSE	canonical	1	29798	junction_4	200285.44253062303	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	917	1291	20.0	-4864	False	AATAAA	-22
PB.5691.5	chr19	+	2098	10	novel_in_catalog	C19orf66	novel	1461	3	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	1	29798	junction_4	192544.21126325155	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	492	1157	20.0	-8	True	AATAAA	-17
PB.5691.6	chr19	+	2486	6	incomplete-splice_match	C19orf66	ENST00000585919.5	2079	7	21	11	21	-1	intron_retention	FALSE	canonical	1	273185	junction_1	89865.58078152058	NA	0	NA	TRUE	NA	NA	NA	C	coding	163	492	111	602	25.0	-7	True	AATAAA	-15
PB.5691.7	chr19	+	3033	6	novel_in_catalog	C19orf66	novel	1461	3	NA	NA	-18	1	intron_retention	FALSE	canonical	1	37272	junction_3	171731.2315560568	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	1724	2089	20.0	-3	True	AATAAA	-20
PB.5691.8	chr19	+	2489	8	novel_in_catalog	C19orf66	novel	1461	3	NA	NA	-13	0	intron_retention	FALSE	canonical	1	29798	junction_4	190880.17158854785	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	1173	1547	20.0	2	True	AATAAA	-18
PB.5691.9	chr19	+	2565	7	novel_in_catalog	C19orf66	novel	1461	3	NA	NA	0	1	intron_retention	FALSE	canonical	1	37272	junction_3	165611.75208366773	NA	0	NA	TRUE	NA	NA	NA	C	coding	124	375	1250	1624	20.0	-4821	False	AATAAA	-17
PB.583.9	chr1	+	5169	1	genic	PRPF38B	novel	NA	NA	NA	NA	-1	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	96	291	271	561	75.0	-5	True	NA	NA
PB.9635.6	chr5	+	4496	11	full-splice_match	FAF2	ENST00000261942.6	4515	11	19	0	19	0	multi-exon	FALSE	canonical	1	151212	junction_3	79676.84526862243	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	35	1372	20.0	-11	True	ATTAAA	-22
PB.3656.36	chr14	+	2005	4	incomplete-splice_match	PAPOLA	ENST00000216277.12	4519	22	53801	530	-4264	-530	5prime_fragment	FALSE	canonical	1	783715	junction_2	59819.84023716546	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	1	474	10.0	-1	True	NA	NA
PB.12204.1	chrX	-	2916	2	novel_not_in_catalog	SLC25A53	novel	6225	2	NA	NA	44595	-3237	any annotated donor/acceptor	FALSE	canonical	1	4390	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	307	924	110	1033	30.0	NA	False	NA	NA
PB.3656.35	chr14	+	2608	5	incomplete-splice_match	PAPOLA	ENST00000216277.12	4519	22	53473	28	-4592	-28	5prime_fragment	FALSE	canonical	1	783715	junction_3	187704.49301095592	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	3	575	85.0	-329	False	NA	NA
PB.2474.13	chr12	-	3408	7	full-splice_match	DUSP16	ENST00000298573.8	5253	7	158	1687	158	0	multi-exon	FALSE	canonical	1	105501	junction_6	69202.7019655543	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	475	2472	40.0	677	False	AATAAA	-16
PB.2474.10	chr12	-	5107	7	novel_in_catalog	DUSP16	novel	5253	7	NA	NA	-13	-13	combination_of_known_junctions	FALSE	canonical	1	3933	junction_6	103774.27815857518	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	500	2497	55.0	2003	False	AATAAA	-27
PB.2474.11	chr12	-	4974	6	novel_in_catalog	DUSP16	novel	5253	7	NA	NA	-39	-13	combination_of_known_junctions	FALSE	canonical	1	8795	junction_5	132500.28938685378	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	1144	2364	55.0	1738	False	AATAAA	-27
PB.4860.9	chr17	+	2037	7	novel_in_catalog	TRAF4	novel	2923	7	NA	NA	6	41	intron_retention	FALSE	canonical	1	17509	junction_2	288331.8024202133	NA	0	NA	TRUE	NA	NA	NA	C	coding	477	1434	103	1536	20.0	0	True	AATAAA	-19
PB.4860.8	chr17	+	2084	6	novel_in_catalog	TRAF4	novel	2923	7	NA	NA	6	40	intron_retention	FALSE	canonical	1	471626	junction_1	103285.3418595301	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	526	1584	20.0	0	True	AATAAA	-18
PB.2474.14	chr12	-	3465	7	novel_in_catalog	DUSP16	novel	5253	7	NA	NA	-39	1	combination_of_known_junctions	FALSE	canonical	1	8795	junction_6	102066.32245369784	NA	1	NA	TRUE	NA	NA	NA	C	coding	665	1998	531	2528	35.0	1738	False	AATAAA	-17
PB.4860.5	chr17	+	2962	6	novel_in_catalog	TRAF4	novel	2923	7	NA	NA	6	-3	intron_retention	FALSE	canonical	1	471626	junction_1	103285.3418595301	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	526	1584	20.0	0	True	NA	NA
PB.4860.4	chr17	+	1974	7	novel_in_catalog	TRAF4	novel	2923	7	NA	NA	5	41	intron_retention	FALSE	canonical	1	6090	junction_4	286639.94198224245	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	586	1473	20.0	-1	True	AATAAA	-19
PB.4860.7	chr17	+	2384	8	novel_not_in_catalog	TRAF4	novel	2923	7	NA	NA	6	-4	any annotated donor/acceptor	FALSE	canonical	1	10491	junction_7	270919.6223400165	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	103	1515	20.0	0	True	NA	NA
PB.4860.6	chr17	+	2594	6	novel_in_catalog	TRAF4	novel	2923	7	NA	NA	6	41	intron_retention	FALSE	canonical	1	471626	junction_1	156925.8447361683	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	1035	2093	20.0	0	True	AATAAA	-19
PB.4860.1	chr17	+	1956	8	novel_not_in_catalog	TRAF4	novel	2923	7	NA	NA	4	41	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	274124.9595347318	NA	0	NA	TRUE	NA	NA	NA	C	coding	470	1413	105	1517	20.0	-2	True	AATAAA	-19
PB.3631.1	chr14	+	3239	10	novel_in_catalog	TMEM251	novel	909	2	NA	NA	11	42120	no_combination_of_known_junctions	FALSE	canonical	1	71	junction_1	141631.26376781764	NA	0	NA	TRUE	NA	NA	NA	B	coding	274	825	241	1065	35.0	-13	True	AATAAA	-9
PB.4860.3	chr17	+	2297	6	incomplete-splice_match	TRAF4	ENST00000444415.7	1456	8	-31	-42	4	42	intron_retention	FALSE	canonical	1	471626	junction_1	146575.9953080995	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	105	1205	15.0	-2	True	AATAAA	-20
PB.4860.2	chr17	+	2894	7	full-splice_match	TRAF4	ENST00000262395.9	2923	7	25	4	4	-4	multi-exon	FALSE	canonical	1	471626	junction_1	143492.07383065528	NA	1	NA	TRUE	NA	NA	NA	C	coding	470	1413	105	1517	20.0	-2	True	NA	NA
PB.1198.2	chr1	+	3356	5	full-splice_match	SPRTN	ENST00000295050.11	3468	5	213	-101	5	101	multi-exon	FALSE	canonical	1	118706	junction_4	8196.071772501751	NA	3	NA	TRUE	NA	NA	NA	C	coding	489	1470	124	1593	40.0	-32	True	ATTAAA	-14
PB.1198.3	chr1	+	3381	4	novel_in_catalog	SPRTN	novel	3559	4	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	1	6724	junction_2	58710.49197734781	NA	2	NA	TRUE	NA	NA	NA	C	coding	446	1341	377	1717	45.0	-41	True	AATAAA	-19
PB.1198.1	chr1	+	2952	5	full-splice_match	SPRTN	ENST00000295050.11	3468	5	216	300	8	-300	multi-exon	FALSE	canonical	1	118706	junction_4	8196.071772501751	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	121	1590	35.0	-29	True	NA	NA
PB.1198.6	chr1	+	2620	5	full-splice_match	SPRTN	ENST00000295050.11	3468	5	202	646	-6	-646	multi-exon	FALSE	canonical	1	118706	junction_4	8196.071772501751	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	135	1604	10.0	-43	True	NA	NA
PB.3656.31	chr14	+	3194	10	incomplete-splice_match	PAPOLA	ENST00000216277.12	4519	22	39832	28	23	-28	5prime_fragment	FALSE	canonical	1	546636	junction_1	188774.68684592692	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	229	1161	85.0	NA	False	NA	NA
PB.8563.26	chr3	+	5434	33	novel_in_catalog	EIF4G1	novel	5516	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12458	junction_5	864671.3133971933	NA	0	NA	TRUE	NA	NA	NA	C	coding	1550	4653	339	4991	15.0	2	True	ATTAAA	-14
PB.1198.5	chr1	+	3314	5	full-splice_match	SPRTN	ENST00000295050.11	3468	5	156	-2	-52	2	multi-exon	FALSE	canonical	1	118706	junction_4	8196.071772501751	NA	5	NA	TRUE	NA	NA	NA	C	coding	489	1470	181	1650	45.0	-89	False	AATAAA	-19
PB.302.1	chr1	-	4446	24	full-splice_match	INPP5B	ENST00000373024.7	3060	24	2	-1388	2	0	multi-exon	FALSE	non_canonical	0	0	junction_22	63241.1852959828	NA	2	NA	TRUE	NA	NA	NA	C	coding	913	2742	87	2828	10.0	1	True	GATAAA	-17
PB.3656.30	chr14	+	3276	11	incomplete-splice_match	PAPOLA	ENST00000216277.12	4519	22	34601	-5	79	5	5prime_fragment	FALSE	canonical	1	516762	junction_1	204139.4700939532	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	278	1210	10.0	NA	False	AATAAA	-21
PB.3792.1	chr15	+	3222	7	full-splice_match	CHP1	ENST00000334660.9	3329	7	96	11	0	-11	multi-exon	FALSE	canonical	1	357862	junction_6	138602.74134734855	NA	1	NA	TRUE	NA	NA	NA	A	coding	195	588	145	732	45.0	-82	True	AATAAA	-13
PB.11621.11	chr9	-	2886	10	full-splice_match	UBQLN1	ENST00000257468.11	2299	10	-35	-552	-35	552	multi-exon	FALSE	canonical	1	190469	junction_3	343206.3244114246	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	291	1976	30.0	-26	True	ATTAAA	-29
PB.11238.11	chr8	+	4225	3	full-splice_match	PDP1	ENST00000520728.5	2554	3	7	-1678	-6	0	multi-exon	FALSE	canonical	1	33876	junction_1	31082.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	144	1832	10.0	-26	True	ATTAAA	-20
PB.1006.1	chr1	+	1460	6	full-splice_match	RGS13	ENST00000462955.1	1465	6	2	3	2	-3	multi-exon	TRUE	canonical	1	37333	junction_2	16933.569681552675	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	247	726	35.0	-11	True	AATAAA	-15
PB.8207.2	chr3	-	2728	6	novel_in_catalog	PTPRG-AS1	novel	2661	5	NA	NA	-1	1716	intron_retention	FALSE	canonical	1	4894	junction_1	9872.253388158148	NA	1	NA	TRUE	NA	NA	NA	B	coding	166	501	266	766	25.0	0	True	ATTAAA	-16
PB.8207.1	chr3	-	2962	6	novel_in_catalog	PTPRG-AS1	novel	352	2	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	1304	junction_5	11766.854097846202	NA	3	NA	TRUE	NA	NA	NA	B	coding	106	321	546	866	40.0	-1	True	ATTAAA	-8
PB.1901.1	chr11	-	2602	3	full-splice_match	AC021723.2	ENST00000649415.1	2383	3	-215	-4	-215	4	multi-exon	FALSE	canonical	1	329	junction_1	881.5	NA	2	NA	TRUE	NA	NA	NA	A	coding	10	33	339	371	75.0	-1	True	NA	NA
PB.9596.2	chr5	-	3518	11	full-splice_match	RNF145	ENST00000424310.6	3613	11	92	3	92	-1	multi-exon	FALSE	canonical	1	59589	junction_5	166865.99199585276	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	269	2260	15.0	93	False	AATAAA	-15
PB.353.1	chr1	+	7722	33	full-splice_match	PTPRF	ENST00000438120.5	6377	33	-39	-1306	-25	0	multi-exon	FALSE	canonical	1	231775	junction_11	326795.7067925749	NA	0	NA	TRUE	NA	NA	NA	C	coding	1898	5697	366	6062	30.0	-53	True	AATAAA	-23
PB.353.3	chr1	+	6397	33	full-splice_match	PTPRF	ENST00000438120.5	6377	33	-19	-1	-5	1	multi-exon	FALSE	canonical	1	231775	junction_11	326795.7067925749	NA	32	4	TRUE	NA	NA	NA	C	coding	1898	5697	346	6042	10.0	-33	True	AATACA	-22
PB.353.2	chr1	+	6898	33	full-splice_match	PTPRF	ENST00000438120.5	6377	33	-36	-485	-22	0	multi-exon	FALSE	canonical	1	231775	junction_11	326795.7067925749	NA	0	NA	TRUE	NA	NA	NA	C	coding	1898	5697	363	6059	80.0	-50	True	NA	NA
PB.8452.8	chr3	-	3583	20	full-splice_match	PLOD2	ENST00000282903.9	3732	20	-34	183	-34	-179	multi-exon	FALSE	canonical	1	434023	junction_19	121532.27213077479	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	213	2489	45.0	2521	False	TATAAA	-11
PB.1915.3	chr11	+	3495	31	full-splice_match	DGKZ	ENST00000456247.6	3482	31	-13	0	-13	0	multi-exon	FALSE	canonical	1	150	junction_13	132400.56243358215	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	102	2888	0.0	16	True	AGTAAA	-19
PB.1915.2	chr11	+	3404	31	novel_in_catalog	DGKZ	novel	3816	31	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	150	junction_13	132434.62845786722	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	110	2797	0.0	-14	True	AGTAAA	-19
PB.1915.1	chr11	+	3297	25	novel_in_catalog	DGKZ	novel	3816	31	NA	NA	-32	763	combination_of_known_junctions	TRUE	canonical	1	150	junction_13	56528.77849944123	NA	0	NA	TRUE	NA	NA	NA	C	coding	786	2361	40	2400	20.0	-61	True	NA	NA
PB.8217.2	chr3	-	2836	11	full-splice_match	SUCLG2	ENST00000307227.9	2352	11	7	-491	0	491	multi-exon	FALSE	canonical	1	28717	junction_3	128028.65870972014	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	22	1320	20.0	-6	True	AATAAA	-17
PB.8217.5	chr3	-	2914	12	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	9714	junction_1	92810.67165431796	NA	1	NA	TRUE	NA	NA	NA	C	coding	408	1227	30	1256	20.0	-14	True	AATAAA	-20
PB.8217.4	chr3	-	3001	11	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	-5	-2	any annotated donor/acceptor	FALSE	canonical	1	10165	junction_1	90135.5896181414	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	34	1260	20.0	-18	True	AATAAA	-20
PB.8217.7	chr3	-	2363	11	full-splice_match	SUCLG2	ENST00000307227.9	2352	11	-13	2	-13	-2	multi-exon	FALSE	canonical	1	28717	junction_3	128028.65870972014	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	42	1340	20.0	-26	False	AATAAA	-20
PB.1915.4	chr11	+	4112	32	novel_in_catalog	DGKZ	novel	3816	31	NA	NA	-28	-2	combination_of_known_junctions	FALSE	canonical	1	150	junction_14	130732.61425177353	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	154	3510	0.0	-40	False	AGTAAA	-14
PB.8217.8	chr3	-	2519	12	novel_not_in_catalog	SUCLG2	novel	1516	11	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	2442	junction_3	139346.4077106682	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	32	1168	20.0	-16	True	AATAAA	-19
PB.7697.1	chr22	-	2789	8	novel_in_catalog	AC004997.1	novel	1974	14	NA	NA	-27477	-6743	intron_retention	FALSE	canonical	1	160978	junction_6	34940.42128877004	NA	1	NA	TRUE	NA	NA	NA	B	coding	369	1110	79	1188	15.0	-22	False	AATAAA	-17
PB.4184.4	chr16	-	3971	5	novel_not_in_catalog	ERVK13-1	novel	1449	3	NA	NA	11	0	intron_retention	FALSE	canonical	1	7844	junction_3	6685.048106595793	NA	2	NA	TRUE	NA	NA	NA	B	coding	105	318	3525	3842	40.0	-16	True	NA	NA
PB.4184.5	chr16	-	3087	2	incomplete-splice_match	ERVK13-1	ENST00000569465.1	3321	3	4	8417	4	-1638	3prime_fragment	FALSE	canonical	1	22811	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	3	True	NA	NA
PB.4184.2	chr16	-	3710	4	novel_in_catalog	ERVK13-1	novel	1449	3	NA	NA	14	2	intron_retention	FALSE	canonical	1	3632	junction_2	9865.389816029685	NA	0	NA	TRUE	NA	NA	NA	B	coding	482	1449	2091	3539	40.0	13	True	NA	NA
PB.4184.3	chr16	-	3586	3	novel_in_catalog	ERVK13-1	novel	1449	3	NA	NA	13	2	intron_retention	FALSE	canonical	1	6825	junction_1	7993.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	482	1449	1967	3415	40.0	-14	True	NA	NA
PB.4184.1	chr16	-	4594	4	novel_in_catalog	ERVK13-1	novel	1449	3	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	3632	junction_2	9865.389816029685	NA	4	NA	TRUE	NA	NA	NA	B	coding	482	1449	2132	3580	5.0	-28	True	NA	NA
PB.860.24	chr1	+	2714	7	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	13404	junction_3	181562.1548365432	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	29	1075	40.0	1	True	NA	NA
PB.1217.3	chr1	-	4694	12	novel_not_in_catalog	B3GALNT2	novel	2015	12	NA	NA	4	2702	intron_retention	FALSE	canonical	0	0	junction_10	72453.14583922495	NA	9	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-26	True	AATAAA	-16
PB.12382.2	chrY	-	4843	2	intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1291	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.12382.3	chrY	-	3855	2	intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1291	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	AATAAA	-13
PB.731.7	chr1	-	4294	21	full-splice_match	ARNT	ENST00000505755.5	2427	21	-3	-1864	-3	-3	multi-exon	FALSE	canonical	1	85430	junction_17	85691.6610764869	NA	2	NA	TRUE	NA	NA	NA	C	coding	774	2325	46	2370	20.0	124	False	NA	NA
PB.12382.1	chrY	-	4890	1	intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.12382.6	chrY	-	2169	1	intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	AATGAA	-15
PB.12382.7	chrY	-	2101	2	intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1291	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	NA	False	AATGAA	-24
PB.12382.4	chrY	-	2540	1	intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	25.0	NA	False	NA	NA
PB.12382.5	chrY	-	2463	2	intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1291	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	NA	False	NA	NA
PB.10068.12	chr6	+	2500	22	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-119	36536	4	-1742	3prime_fragment	FALSE	canonical	1	148676	junction_1	50350.55822846821	NA	0	NA	TRUE	NA	NA	NA	B	coding	747	2241	259	2499	30.0	1	True	AATGAA	-5
PB.731.9	chr1	-	4211	21	novel_in_catalog	ARNT	novel	4887	22	NA	NA	-2	-4	no_combination_of_known_junctions	FALSE	canonical	1	21065	junction_11	112216.87748278999	NA	4	NA	TRUE	NA	NA	NA	C	coding	747	2244	45	2288	20.0	125	False	NA	NA
PB.731.8	chr1	-	4365	23	novel_not_in_catalog	ARNT	novel	4887	22	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	8497	junction_22	109411.4013474369	NA	3	1	TRUE	NA	NA	NA	C	coding	780	2343	100	2442	20.0	-9	True	NA	NA
PB.860.23	chr1	+	2910	6	novel_in_catalog	SLAMF7	novel	2345	4	NA	NA	2	2	intron_retention	FALSE	canonical	1	206654	junction_1	135005.22519310133	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	54	1271	40.0	2	True	NA	NA
PB.1242.12	chr1	+	2237	8	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	78307.58664916399	NA	3	NA	TRUE	NA	NA	NA	B	coding	275	828	1228	2055	35.0	7	True	AATAAA	-24
PB.1242.13	chr1	+	4787	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-3	-248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	85449.02685804943	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1202	2356	40.0	9	True	TTTAAA	-10
PB.1242.10	chr1	+	4615	9	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	-9	-244	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	90915.0702007614	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1026	2180	30.0	3	True	TTTAAA	-14
PB.2982.9	chr12	-	3702	18	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	-20	2475	any annotated donor/acceptor	FALSE	canonical	1	14910	junction_17	143602.51999384034	NA	0	NA	TRUE	NA	NA	NA	C	coding	1109	3327	376	3702	45.0	1034	False	NA	NA
PB.1242.16	chr1	+	4900	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	34	-248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	87200.38412094011	NA	2	NA	TRUE	NA	NA	NA	B	coding	384	1155	1315	2469	40.0	-9	True	TTTAAA	-10
PB.1242.17	chr1	+	4283	10	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	45	-854	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	87200.38412094011	NA	3	NA	TRUE	NA	NA	NA	B	coding	384	1155	1304	2458	35.0	2	True	TATAAA	-24
PB.1242.14	chr1	+	1597	1	novel_in_catalog	CNST	novel	2767	8	NA	NA	23	-65824	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	85.0	10	True	NA	NA
PB.1242.15	chr1	+	4631	11	novel_not_in_catalog	CNST	novel	2767	8	NA	NA	23	-248	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	84116.73478708026	NA	3	1	TRUE	NA	NA	NA	B	coding	298	897	179	1075	40.0	10	True	TTTAAA	-10
PB.2982.2	chr12	-	5960	25	full-splice_match	CLIP1	ENST00000358808.6	5880	25	-79	-1	-16	-1	multi-exon	FALSE	canonical	1	45537	junction_17	148038.3753485102	NA	0	NA	TRUE	NA	NA	NA	C	coding	1427	4284	235	4518	0.0	1038	False	AATAAA	-14
PB.2982.3	chr12	-	5830	24	full-splice_match	CLIP1	ENST00000537178.5	5229	24	-30	-571	-30	-38	multi-exon	FALSE	canonical	1	109019	junction_23	117815.78604556764	NA	0	NA	TRUE	NA	NA	NA	C	coding	1392	4179	249	4427	20.0	1024	False	ATTAAA	-13
PB.2725.5	chr12	-	2584	3	full-splice_match	C12orf66	ENST00000398055.7	4151	3	13	1554	-6	2	multi-exon	FALSE	canonical	1	50006	junction_2	6243.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	42	1379	15.0	-8	True	NA	NA
PB.8386.1	chr3	+	2085	1	antisense	novelGene_CNBP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6160.10	chr19	+	3439	27	full-splice_match	POLD1	ENST00000440232.6	3444	27	6	-1	1	-1	multi-exon	FALSE	canonical	1	176303	junction_1	92712.07302260009	NA	0	NA	TRUE	NA	NA	NA	C	coding	1107	3324	48	3371	5.0	-2	True	AATAAA	-19
PB.6160.11	chr19	+	3308	26	novel_in_catalog	POLD1	novel	3474	26	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	3357	junction_22	138457.43279408876	NA	1	NA	TRUE	NA	NA	NA	C	coding	999	3000	51	3050	5.0	-2	True	AATAAA	-18
PB.2982.4	chr12	-	6052	26	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	14910	junction_25	168183.1460083156	NA	7	NA	TRUE	NA	NA	NA	C	coding	1427	4284	328	4611	0.0	7	True	AATAAA	-13
PB.2982.5	chr12	-	5920	25	novel_not_in_catalog	CLIP1	novel	5568	24	NA	NA	-9	-20	any annotated donor/acceptor	FALSE	canonical	1	14910	junction_24	147297.83902010598	NA	2	NA	TRUE	NA	NA	NA	C	coding	1392	4179	321	4499	30.0	14	True	ATTAAA	-31
PB.1474.9	chr10	+	4313	22	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	1	7657	junction_2	236654.4171812398	NA	0	NA	TRUE	NA	NA	NA	C	coding	952	2859	384	3242	20.0	1	True	AATAAA	-22
PB.1474.8	chr10	+	4598	25	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	39701	junction_8	303306.73414246	NA	0	NA	TRUE	NA	NA	NA	C	coding	1117	3354	181	3534	30.0	1	True	AATAAA	-15
PB.10815.1	chr7	+	1775	1	full-splice_match	AC006333.2	ENST00000607957.1	2099	1	136	188	136	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-8	True	ATTAAA	-17
PB.1474.1	chr10	+	4579	24	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	1	39701	junction_7	259229.92047598376	NA	1	NA	TRUE	NA	NA	NA	C	coding	1117	3354	162	3515	30.0	-67	False	AATAAA	-15
PB.1474.3	chr10	+	4692	22	full-splice_match	SEC24C	ENST00000465076.5	4668	22	-20	-4	-20	2	multi-exon	FALSE	canonical	1	490573	junction_6	181110.77627649307	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	103	3231	20.0	-8	True	AATAAA	-19
PB.1474.2	chr10	+	4222	23	novel_not_in_catalog	SEC24C	novel	4668	22	NA	NA	-25	0	any annotated donor/acceptor	FALSE	canonical	1	4012	junction_4	274702.48661546747	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	108	3158	30.0	-13	True	AATAAA	-15
PB.1474.5	chr10	+	4366	23	novel_not_in_catalog	SEC24C	novel	4668	22	NA	NA	-12	-1	any annotated donor/acceptor	FALSE	canonical	1	17291	junction_21	232324.6873145106	NA	0	NA	TRUE	NA	NA	NA	C	coding	1068	3207	95	3301	25.0	0	True	AATAAA	-16
PB.1474.4	chr10	+	4874	21	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-12	0	intron_retention	FALSE	canonical	1	490573	junction_6	183101.40126533032	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	95	2581	30.0	0	True	AATAAA	-15
PB.1474.7	chr10	+	5138	20	novel_in_catalog	SEC24C	novel	4668	22	NA	NA	-12	0	intron_retention	FALSE	canonical	1	490573	junction_6	175685.9194570789	NA	1	NA	TRUE	NA	NA	NA	C	coding	828	2487	95	2581	30.0	0	True	AATAAA	-15
PB.1474.6	chr10	+	4345	24	novel_not_in_catalog	SEC24C	novel	4668	22	NA	NA	-12	0	any annotated donor/acceptor	FALSE	canonical	1	4012	junction_5	229512.17635388247	NA	3	1	TRUE	NA	NA	NA	C	coding	1034	3105	177	3281	30.0	0	True	AATAAA	-15
PB.6733.8	chr2	-	4521	7	novel_in_catalog	AMMECR1L	novel	4658	8	NA	NA	20	0	no_combination_of_known_junctions	FALSE	canonical	1	3940	junction_6	60677.66373954166	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	132	1064	30.0	-1535	False	AATAAA	-10
PB.10849.9	chr7	+	2461	17	full-splice_match	MKLN1	ENST00000494785.5	2386	17	-4	-71	-4	71	multi-exon	FALSE	canonical	1	170190	junction_1	57929.765146036974	NA	3	1	TRUE	NA	NA	NA	C	coding	731	2196	22	2217	15.0	-12	True	ATTAAA	-15
PB.3278.1	chr13	-	7214	23	novel_in_catalog	RASA3	novel	4191	24	NA	NA	9	-1	intron_retention	FALSE	canonical	1	140275	junction_22	56993.10563113231	NA	4	NA	TRUE	NA	NA	NA	C	coding	451	1356	4296	5651	15.0	5	True	ATTAAA	-22
PB.1240.15	chr1	-	3624	14	full-splice_match	HNRNPU	ENST00000444376.7	6827	14	18	3185	-4	-15	multi-exon	FALSE	canonical	1	1037046	junction_1	1614879.0492050434	NA	2	NA	TRUE	NA	NA	NA	C	coding	806	2421	236	2656	15.0	-1	True	NA	NA
PB.3278.3	chr13	-	4184	24	full-splice_match	RASA3	ENST00000334062.7	4191	24	-22	29	-22	-29	multi-exon	FALSE	canonical	1	140275	junction_23	55793.24707967588	NA	1	NA	TRUE	NA	NA	NA	C	coding	834	2505	145	2649	45.0	-26	True	TATAAA	-33
PB.3278.2	chr13	-	4641	26	novel_not_in_catalog	RASA3	novel	4191	24	NA	NA	-2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_23	97941.0753522668	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	1723	3078	15.0	-6	True	ATTAAA	-22
PB.6216.10	chr19	-	3349	1	novel_in_catalog	PPP6R1	novel	3961	24	NA	NA	2	-7075	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	B	coding	112	339	811	1149	90.0	1	True	NA	NA
PB.3278.4	chr13	-	4093	23	novel_in_catalog	RASA3	novel	4191	24	NA	NA	-21	-1	no_combination_of_known_junctions	FALSE	canonical	1	4481	junction_22	72067.41587506168	NA	0	NA	TRUE	NA	NA	NA	C	coding	451	1356	1175	2530	15.0	-25	True	ATTAAA	-22
PB.3278.7	chr13	-	3970	22	novel_in_catalog	RASA3	novel	4191	24	NA	NA	3	-5	no_combination_of_known_junctions	FALSE	canonical	1	4481	junction_21	91330.8384931863	NA	2	NA	TRUE	NA	NA	NA	C	coding	451	1356	1056	2411	10.0	-1	True	ATTAAA	-18
PB.3278.6	chr13	-	4273	24	novel_not_in_catalog	RASA3	novel	4191	24	NA	NA	3	-5	any annotated donor/acceptor	FALSE	canonical	1	2972	junction_13	75967.49267045189	NA	1	1	TRUE	NA	NA	NA	C	coding	864	2595	120	2714	10.0	-1	True	ATTAAA	-18
PB.3278.9	chr13	-	3651	1	novel_in_catalog	RASA3	novel	4191	24	NA	NA	20	-107532	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	168	507	1869	2375	65.0	16	True	AATAAA	-36
PB.537.2	chr1	+	2357	13	full-splice_match	RPAP2	ENST00000610020.1	16993	13	54	14582	54	241	multi-exon	TRUE	canonical	1	87692	junction_1	33168.778675217385	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	56	1894	25.0	-40	False	AATAAA	-18
PB.1240.19	chr1	-	3613	14	full-splice_match	HNRNPU	ENST00000444376.7	6827	14	-7	3221	-7	-51	multi-exon	FALSE	canonical	1	1037046	junction_1	1614879.0492050434	NA	0	NA	TRUE	NA	NA	NA	C	coding	806	2421	261	2681	30.0	2	True	AATGAA	-21
PB.8068.12	chr3	+	5784	19	novel_in_catalog	SACM1L	novel	571	6	NA	NA	49	-4	intron_retention	FALSE	canonical	1	249581	junction_4	78566.20696859495	NA	5	NA	TRUE	NA	NA	NA	C	coding	436	1311	61	1371	30.0	10	True	AATAAA	-30
PB.750.5	chr1	-	4407	18	novel_in_catalog	POGZ	novel	6152	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	52120	junction_16	113560.27325561203	NA	0	NA	TRUE	NA	NA	NA	C	coding	1357	4074	31	4104	80.0	-2	True	TTTAAA	-32
PB.7580.3	chr21	-	3145	3	novel_not_in_catalog	S100B	novel	877	3	NA	NA	122	5061	any annotated donor/acceptor	FALSE	canonical	1	2066	junction_1	610807.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-5	True	NA	NA
PB.7580.2	chr21	-	3376	3	novel_not_in_catalog	S100B	novel	877	3	NA	NA	126	5296	any annotated donor/acceptor	FALSE	canonical	1	2066	junction_1	610807.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.7580.1	chr21	-	3550	3	novel_not_in_catalog	S100B	novel	877	3	NA	NA	126	5470	any annotated donor/acceptor	FALSE	canonical	1	2066	junction_1	610807.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	NA	NA
PB.6348.1	chr2	-	2321	2	full-splice_match	SF3B6	ENST00000478050.1	720	2	47	-1648	47	1648	multi-exon	FALSE	canonical	1	1570141	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.7580.7	chr21	-	3397	3	novel_not_in_catalog	S100B	novel	877	3	NA	NA	127	2640	any annotated donor/acceptor	FALSE	canonical	1	42889	junction_2	790626.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	92	279	78	356	15.0	0	True	NA	NA
PB.7580.6	chr21	-	3645	3	full-splice_match	S100B	ENST00000291700.8	877	3	127	-2895	127	2895	multi-exon	FALSE	canonical	1	1223681	junction_2	200230.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	92	279	71	349	35.0	0	True	NA	NA
PB.7580.5	chr21	-	2269	3	novel_not_in_catalog	S100B	novel	877	3	NA	NA	127	4190	any annotated donor/acceptor	FALSE	canonical	1	2066	junction_1	610807.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.7580.4	chr21	-	5811	3	full-splice_match	S100B	ENST00000291700.8	877	3	127	-5061	127	5061	multi-exon	TRUE	canonical	1	1223681	junction_2	200230.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	92	279	71	349	80.0	0	True	NA	NA
PB.7580.9	chr21	-	3323	2	full-splice_match	S100B	ENST00000397648.1	839	2	-2188	-296	127	-23	multi-exon	FALSE	canonical	1	1624142	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	NA	NA
PB.7580.8	chr21	-	6574	1	genic	S100B	novel	NA	NA	NA	NA	127	454	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	101	306	3321	3626	10.0	0	True	NA	NA
PB.11142.3	chr8	+	3330	4	full-splice_match	FAM110B	ENST00000519262.5	578	4	32	-2784	-13	-5	multi-exon	FALSE	canonical	1	28936	junction_1	17652.131448260483	NA	2	NA	TRUE	NA	NA	NA	C	coding	370	1113	778	1890	15.0	-2028	False	AATAAA	-17
PB.8445.4	chr3	+	3829	17	novel_not_in_catalog	PLS1	novel	3706	16	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	1079	junction_1	49237.57442234633	NA	1	NA	TRUE	NA	NA	NA	C	coding	629	1890	288	2177	35.0	13	True	AATAAA	-15
PB.11475.2	chr9	-	828	6	full-splice_match	RPS6	ENST00000380394.8	1387	6	18	541	0	-1	multi-exon	FALSE	canonical	1	14744462	junction_5	6396461.162734426	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	42	791	15.0	-1	True	AATAAA	-16
PB.2080.1	chr11	+	2897	16	full-splice_match	KLC2	ENST00000394067.6	2898	16	55	-54	39	0	multi-exon	FALSE	canonical	1	195551	junction_1	135779.78855949888	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	126	1994	15.0	-10	True	AATAAA	-16
PB.2080.2	chr11	+	2923	16	full-splice_match	KLC2	ENST00000316924.9	2990	16	66	1	-39	0	multi-exon	FALSE	canonical	1	55241	junction_1	158449.9325404155	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	152	2020	15.0	1	True	AATAAA	-16
PB.9553.35	chr5	-	3215	9	incomplete-splice_match	CSNK1A1	ENST00000377843.6	2559	10	116	7814	-39	1136	3prime_fragment	FALSE	canonical	1	567729	junction_1	417275.28000102943	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	473	1483	35.0	-1	True	AATAAA	-25
PB.5662.4	chr19	+	5580	20	novel_in_catalog	AC008878.3	novel	4964	22	NA	NA	12287	0	intron_retention	FALSE	canonical	1	24526	junction_1	70019.1905703531	NA	1	NA	TRUE	NA	NA	NA	B	coding	987	2964	438	3401	15.0	-24	True	AATAAA	-14
PB.819.4	chr1	+	3416	4	novel_not_in_catalog	SLC25A44	novel	3662	4	NA	NA	14	0	any annotated donor/acceptor	FALSE	canonical	1	8471	junction_2	98031.43659844813	NA	2	NA	TRUE	NA	NA	NA	C	coding	297	894	159	1052	10.0	-14	True	ATTAAA	-20
PB.5662.5	chr19	+	5409	20	incomplete-splice_match	ARHGEF18	ENST00000319670.13	5212	21	29	-5	-10	5	intron_retention	FALSE	canonical	1	113585	junction_1	55338.741517515395	NA	2	NA	TRUE	NA	NA	NA	C	coding	1015	3048	178	3225	10.0	-3	True	AATAAA	-19
PB.2303.1	chr11	+	2200	1	novel_in_catalog	ATP5MG	novel	1577	3	NA	NA	-18	-3702	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	0	True	NA	NA
PB.2303.3	chr11	+	1118	3	full-splice_match	ATP5MG	ENST00000300688.7	1577	3	453	6	-3	-6	multi-exon	FALSE	canonical	1	2127485	junction_2	1388141.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	60	371	15.0	0	True	AATAAA	-15
PB.2303.2	chr11	+	482	3	full-splice_match	ATP5MG	ENST00000300688.7	1577	3	439	656	-17	-4	multi-exon	FALSE	canonical	1	2127485	junction_2	1388141.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	74	385	30.0	1	True	AATAAA	-13
PB.2212.2	chr11	-	1408	3	full-splice_match	RAB38	ENST00000243662.10	1465	3	15	42	15	-42	multi-exon	FALSE	canonical	1	145241	junction_1	7855.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	69	704	70.0	-12	True	NA	NA
PB.2212.3	chr11	-	3826	2	novel_not_in_catalog	RAB38	novel	1465	3	NA	NA	-20	-57213	any annotated donor/acceptor	FALSE	canonical	1	4355	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	87	264	104	367	30.0	-47	True	AATAAA	-15
PB.3242.8	chr13	-	3382	17	novel_in_catalog	TMTC4	novel	3483	18	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	643	junction_11	52499.208788643606	NA	1	NA	TRUE	NA	NA	NA	C	coding	710	2133	193	2325	40.0	-87	False	AGTAAA	-16
PB.2212.1	chr11	-	2370	4	novel_not_in_catalog	RAB38	novel	1465	3	NA	NA	-10	-6	any annotated donor/acceptor	FALSE	canonical	1	3859	junction_2	66531.51378273474	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	1217	1630	30.0	-4	True	AATAAA	-28
PB.2212.4	chr11	-	3504	2	novel_not_in_catalog	RAB38	novel	1465	3	NA	NA	-2	-57517	any annotated donor/acceptor	FALSE	canonical	1	4355	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	87	264	86	349	20.0	-29	True	NA	NA
PB.3242.2	chr13	-	3693	19	full-splice_match	TMTC4	ENST00000342624.9	3602	19	-92	1	-8	-1	multi-exon	FALSE	canonical	1	74723	junction_18	36443.84156602465	NA	0	NA	TRUE	NA	NA	NA	C	coding	760	2283	352	2634	35.0	-93	False	AGTAAA	-18
PB.8142.1	chr3	+	2545	11	full-splice_match	MAPKAPK3	ENST00000357955.6	2500	11	-44	-1	-5	0	multi-exon	FALSE	canonical	1	262433	junction_1	223311.58999400368	NA	3	1	TRUE	NA	NA	NA	C	coding	382	1149	154	1302	5.0	-25	True	AATAAA	-17
PB.8142.2	chr3	+	2361	11	novel_not_in_catalog	MAPKAPK3	novel	2988	13	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	1385	junction_1	287666.0666651699	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	286	1116	5.0	-20	True	AATAAA	-19
PB.3242.1	chr13	-	3731	18	novel_not_in_catalog	TMTC4	novel	3483	18	NA	NA	-30	298	any annotated donor/acceptor	FALSE	canonical	0	0	junction_16	50744.058178832594	NA	58	4	TRUE	NA	NA	NA	C	coding	620	1863	504	2366	25.0	-31	True	AATAAA	-12
PB.3242.6	chr13	-	3597	18	novel_in_catalog	TMTC4	novel	3483	18	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	18960	junction_13	43631.4494088332	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	964	2538	35.0	-85	False	AGTAAA	-18
PB.3242.7	chr13	-	3572	19	novel_not_in_catalog	TMTC4	novel	3483	18	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	5569	junction_13	55289.0911866889	NA	2	NA	TRUE	NA	NA	NA	C	coding	799	2400	114	2513	35.0	-8	True	AGTAAA	-18
PB.3242.4	chr13	-	3478	18	full-splice_match	TMTC4	ENST00000376234.7	3483	18	-2	7	-2	0	multi-exon	FALSE	canonical	1	33914	junction_17	41328.891065858086	NA	0	NA	TRUE	NA	NA	NA	C	coding	741	2226	193	2418	35.0	-87	False	AGTAAA	-19
PB.3242.5	chr13	-	3705	19	novel_in_catalog	TMTC4	novel	3483	18	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	1	4610	junction_17	45861.45421030553	NA	1	NA	TRUE	NA	NA	NA	C	coding	741	2226	421	2646	35.0	-28	True	AGTAAA	-18
PB.10068.11	chr6	+	3170	27	incomplete-splice_match	MYO6	ENST00000369977.7	5597	35	-119	25340	4	9454	3prime_fragment	FALSE	canonical	1	148676	junction_1	79567.27048755811	NA	1	NA	TRUE	NA	NA	NA	B	coding	970	2910	259	3168	55.0	1	True	AAAACA	-16
PB.9553.34	chr5	-	3973	9	incomplete-splice_match	CSNK1A1	ENST00000377843.6	2559	10	118	7054	-37	1896	3prime_fragment	FALSE	canonical	1	567729	junction_1	417275.28000102943	NA	2	NA	TRUE	NA	NA	NA	C	coding	336	1011	471	1481	65.0	1	True	NA	NA
PB.9000.6	chr4	+	3858	9	novel_in_catalog	ZNF330	novel	733	2	NA	NA	-8	-3	intron_retention	FALSE	canonical	1	219237	junction_2	113585.10121428504	NA	3	NA	TRUE	NA	NA	NA	B	coding	283	852	2302	3153	40.0	-10	True	AATAAA	-16
PB.9000.7	chr4	+	1855	9	novel_not_in_catalog	ZNF330	novel	733	2	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	170745.46793546234	NA	2	NA	TRUE	NA	NA	NA	B	coding	319	960	191	1150	40.0	-5	True	AATAAA	-16
PB.9000.1	chr4	+	3698	9	novel_in_catalog	ZNF330	novel	733	2	NA	NA	-4	-200	intron_retention	FALSE	canonical	1	219237	junction_2	113585.10121428504	NA	0	NA	TRUE	NA	NA	NA	B	coding	283	852	2339	3190	20.0	-47	True	ATTAAA	-32
PB.9000.2	chr4	+	1623	9	novel_not_in_catalog	ZNF330	novel	733	2	NA	NA	-2	-208	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	213882.00625987686	NA	2	NA	TRUE	NA	NA	NA	B	coding	319	960	164	1123	35.0	-32	True	ATTAAA	-24
PB.4104.1	chr15	-	2669	3	intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1436	junction_2	8.5	NA	0	NA	FALSE	NA	NA	NA	A	coding	117	354	254	607	75.0	NA	False	NA	NA
PB.7715.2	chr22	-	2326	5	full-splice_match	PIK3IP1	ENST00000441972.5	2374	5	48	0	2	0	multi-exon	FALSE	canonical	1	45447	junction_1	87199.19540626508	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	143	664	75.0	1	True	NA	NA
PB.7715.1	chr22	-	2367	6	full-splice_match	PIK3IP1	ENST00000215912.9	2467	6	10	90	10	-4	multi-exon	FALSE	canonical	1	224532	junction_3	58561.86385899957	NA	1	NA	TRUE	NA	NA	NA	C	coding	263	792	175	966	30.0	20	False	TATAAA	-15
PB.9000.8	chr4	+	1659	9	novel_not_in_catalog	ZNF330	novel	733	2	NA	NA	0	-194	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	170745.46793546234	NA	3	NA	TRUE	NA	NA	NA	B	coding	319	960	186	1145	20.0	0	True	ATTAAA	-38
PB.132.8	chr1	-	3240	22	novel_in_catalog	EMC1	novel	6664	23	NA	NA	-9	-1	no_combination_of_known_junctions	FALSE	canonical	1	5084	junction_10	141959.41295368265	NA	1	NA	TRUE	NA	NA	NA	C	coding	951	2856	28	2883	10.0	-13	True	TTTAAA	-3
PB.132.9	chr1	-	2238	14	novel_not_in_catalog	EMC1	novel	6664	23	NA	NA	-1	-6	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_13	135271.6258903461	NA	1	NA	TRUE	NA	NA	NA	C	coding	622	1869	18	1886	25.0	-3	True	NA	NA
PB.8116.8	chr3	+	5686	5	novel_in_catalog	DAG1	novel	5576	3	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	6156	junction_1	216037.19464293064	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	591	3272	20.0	-41	True	AATAAA	-18
PB.132.1	chr1	-	4223	23	full-splice_match	EMC1	ENST00000477853.5	6664	23	15	2426	-10	58	multi-exon	TRUE	canonical	1	274950	junction_14	81699.28505984158	NA	2	NA	TRUE	NA	NA	NA	C	coding	993	2982	29	3010	15.0	-14	True	CATAAA	-16
PB.132.2	chr1	-	4157	22	novel_in_catalog	EMC1	novel	6664	23	NA	NA	-8	57	no_combination_of_known_junctions	FALSE	canonical	1	4287	junction_13	119617.1651433995	NA	3	NA	TRUE	NA	NA	NA	C	coding	972	2919	27	2945	20.0	-12	True	CATAAA	-15
PB.132.3	chr1	-	4087	23	full-splice_match	EMC1	ENST00000477853.5	6664	23	21	2556	-4	-72	multi-exon	FALSE	canonical	1	274950	junction_14	81699.28505984158	NA	2	NA	TRUE	NA	NA	NA	C	coding	993	2982	23	3004	15.0	-8	True	ATTAAA	-17
PB.132.4	chr1	-	3304	23	novel_in_catalog	EMC1	novel	6664	23	NA	NA	-2	11	combination_of_known_junctions	FALSE	canonical	1	14248	junction_2	142721.40592591945	NA	15	2	TRUE	NA	NA	NA	C	coding	933	2802	21	2822	10.0	-6	True	TTTAAA	-15
PB.132.5	chr1	-	3302	22	full-splice_match	EMC1	ENST00000375208.7	4084	22	-10	792	-5	5	multi-exon	FALSE	canonical	1	4984	junction_20	116732.89001681576	NA	1	NA	TRUE	NA	NA	NA	C	coding	971	2916	24	2939	5.0	-9	True	TTTAAA	-9
PB.132.6	chr1	-	3360	23	full-splice_match	EMC1	ENST00000477853.5	6664	23	5	3299	5	-18	multi-exon	FALSE	canonical	1	274950	junction_14	81699.28505984158	NA	1	NA	TRUE	NA	NA	NA	C	coding	993	2982	39	3020	25.0	-24	False	NA	NA
PB.10390.1	chr7	-	4413	15	full-splice_match	EIF2AK1	ENST00000199389.10	4469	15	43	13	-12	-13	multi-exon	FALSE	canonical	1	395395	junction_10	367399.6917434869	NA	4	NA	TRUE	NA	NA	NA	C	coding	630	1893	105	1997	55.0	-13	False	NA	NA
PB.8473.25	chr3	+	2473	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	7	525	combination_of_known_junctions	FALSE	canonical	1	118983	junction_1	328081.2097758486	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	283	1155	80.0	-1127	False	NA	NA
PB.10390.3	chr7	-	2732	15	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	-46657	504	any annotated donor/acceptor	FALSE	canonical	1	2028	junction_14	445072.29475588043	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	319	1911	70.0	-1242	False	NA	NA
PB.10390.2	chr7	-	3050	15	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	7	588	any annotated donor/acceptor	FALSE	canonical	1	4378	junction_14	444729.15147768444	NA	0	NA	TRUE	NA	NA	NA	C	coding	530	1593	553	2145	35.0	17	True	AATAAA	-20
PB.10390.5	chr7	-	2672	14	novel_in_catalog	EIF2AK1	novel	4469	15	NA	NA	0	504	no_combination_of_known_junctions	FALSE	canonical	1	13995	junction_12	445035.05744127993	NA	0	NA	TRUE	NA	NA	NA	C	coding	506	1521	331	1851	70.0	-1	True	NA	NA
PB.10390.4	chr7	-	2658	15	full-splice_match	EIF2AK1	ENST00000199389.10	4469	15	203	1608	29	504	multi-exon	FALSE	canonical	1	395395	junction_10	367399.6917434869	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1593	245	1837	70.0	147	False	NA	NA
PB.8473.22	chr3	+	5257	11	novel_not_in_catalog	MBNL1	novel	1039	3	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	18527	junction_2	425297.8911732458	NA	7	NA	TRUE	NA	NA	NA	C	coding	290	873	973	1845	25.0	-1141	False	AATAAA	-36
PB.10390.6	chr7	-	2809	15	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	0	528	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	442165.97502415447	NA	1	NA	TRUE	NA	NA	NA	C	coding	623	1872	93	1964	25.0	-1	True	AATAAA	-18
PB.10390.9	chr7	-	2608	15	novel_not_in_catalog	EIF2AK1	novel	4469	15	NA	NA	0	516	any annotated donor/acceptor	FALSE	canonical	1	4162	junction_7	473953.115014512	NA	1	NA	TRUE	NA	NA	NA	C	coding	560	1683	93	1775	45.0	-1	True	AATAAA	-6
PB.1010.4	chr1	+	2641	9	novel_in_catalog	TROVE2	novel	2143	9	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	6312	junction_2	140884.33960206286	NA	3	NA	TRUE	NA	NA	NA	C	coding	387	1164	226	1389	25.0	0	True	ATTAAA	-18
PB.8473.28	chr3	+	4304	2	incomplete-splice_match	MBNL1	ENST00000461436.1	1681	3	14	-1086	0	1086	intron_retention	FALSE	canonical	1	530746	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1120	False	NA	NA
PB.8473.29	chr3	+	4553	9	novel_in_catalog	MBNL1	novel	1039	3	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	118983	junction_1	328081.2097758486	NA	0	NA	TRUE	NA	NA	NA	C	coding	290	873	267	1139	20.0	-3	True	AATAAA	-38
PB.326.1	chr1	+	2673	6	full-splice_match	ZFP69	ENST00000372706.5	2871	6	61	137	61	-82	multi-exon	FALSE	canonical	1	12601	junction_1	10328.306529146004	NA	0	NA	TRUE	NA	NA	NA	A	coding	526	1581	946	2526	35.0	-14	True	AATAAA	-17
PB.8569.2	chr3	+	5000	47	full-splice_match	VPS8	ENST00000436792.6	5011	47	3	8	3	0	multi-exon	FALSE	canonical	1	80604	junction_1	44370.13378682635	NA	0	NA	TRUE	NA	NA	NA	C	coding	1426	4281	141	4421	5.0	-22	True	AATAAA	-19
PB.8853.100	chr4	-	2364	2	full-splice_match	THAP9-AS1	ENST00000503704.1	637	2	1	-1728	1	-172	multi-exon	FALSE	canonical	1	399876	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	0	True	ATTAAA	-36
PB.6609.2	chr2	-	2874	4	novel_not_in_catalog	RNF103-CHMP3	novel	1135	8	NA	NA	-218	-92978	intron_retention	FALSE	canonical	1	3102	junction_1	123167.71908616676	NA	1	NA	TRUE	NA	NA	NA	A	coding	690	2073	361	2433	40.0	586	False	AATAAA	-14
PB.8274.2	chr3	-	547	6	full-splice_match	RPL24	ENST00000394077.7	623	6	75	1	-2	-1	multi-exon	FALSE	canonical	1	1183287	junction_5	954885.9068269046	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	32	505	10.0	10	True	AATAAA	-17
PB.6609.1	chr2	-	2537	4	full-splice_match	RNF103	ENST00000237455.4	3477	4	925	15	-102	-8	multi-exon	FALSE	canonical	1	259098	junction_3	17869.303182335407	NA	0	NA	TRUE	NA	NA	NA	A	coding	685	2058	45	2102	55.0	902	False	AATAAA	-8
PB.3492.3	chr14	+	2967	23	incomplete-splice_match	SYNE2	ENST00000358025.7	21842	116	78	231337	69	34218	3prime_fragment	FALSE	canonical	1	24893	junction_1	33972.37220874735	NA	0	NA	TRUE	NA	NA	NA	B	coding	944	2832	135	2966	50.0	-1120	False	AATAGA	-6
PB.3492.2	chr14	+	3035	23	novel_not_in_catalog	SYNE2	novel	21842	116	NA	NA	-17	34254	any annotated donor/acceptor	FALSE	canonical	1	7512	junction_1	36147.454200791886	NA	0	NA	TRUE	NA	NA	NA	B	coding	956	2868	167	3034	75.0	-48	True	AATAGA	-42
PB.3492.1	chr14	+	2295	19	incomplete-splice_match	SYNE2	ENST00000358025.7	21842	116	84	239961	75	25594	3prime_fragment	FALSE	canonical	1	24893	junction_1	28375.276549095594	NA	3	1	TRUE	NA	NA	NA	B	coding	722	2166	129	2294	65.0	-1114	False	NA	NA
PB.11752.11	chr9	-	5685	37	full-splice_match	CDK5RAP2	ENST00000360190.8	5985	37	-20	320	-8	0	multi-exon	FALSE	canonical	1	83570	junction_6	85068.66205384886	NA	0	NA	TRUE	NA	NA	NA	C	coding	1813	5442	204	5645	10.0	-20	False	AATAAA	-20
PB.3492.7	chr14	+	2235	18	incomplete-splice_match	SYNE2	ENST00000358025.7	21842	116	1	242673	1	22882	3prime_fragment	FALSE	canonical	1	24893	junction_1	29158.909814869545	NA	0	NA	TRUE	NA	NA	NA	B	coding	674	2022	212	2233	55.0	-30	True	AATGAA	-16
PB.3492.6	chr14	+	6096	40	incomplete-splice_match	SYNE2	ENST00000358025.7	21842	116	1	201476	1	-24323	3prime_fragment	FALSE	canonical	1	24893	junction_1	34178.756930683696	NA	0	NA	TRUE	NA	NA	NA	B	coding	1961	5883	212	6094	60.0	-30	True	NA	NA
PB.3492.5	chr14	+	9292	48	incomplete-splice_match	SYNE2	ENST00000358025.7	21842	116	-4	173443	-4	3710	3prime_fragment	TRUE	canonical	1	24893	junction_1	37562.58629782593	NA	1	1	TRUE	NA	NA	NA	B	coding	3025	9075	217	9291	65.0	-35	True	ACTAAA	-45
PB.3492.4	chr14	+	3818	28	novel_not_in_catalog	SYNE2	novel	21842	116	NA	NA	-8	39798	any annotated donor/acceptor	FALSE	canonical	1	1127	junction_1	34196.28365700894	NA	0	NA	TRUE	NA	NA	NA	B	coding	1198	3594	225	3818	60.0	-39	True	CATAAA	-32
PB.7609.1	chr22	-	3714	3	full-splice_match	C22orf39	ENST00000399562.8	3350	3	519	-883	-16	-8	multi-exon	FALSE	canonical	1	119491	junction_1	23315.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	105	318	26	343	40.0	-14	True	NA	NA
PB.3492.9	chr14	+	4350	16	incomplete-splice_match	SYNE2	ENST00000358025.7	21842	116	163488	173443	13447	3710	internal_fragment	FALSE	canonical	1	92021	junction_11	47242.34146817403	NA	2	NA	TRUE	NA	NA	NA	B	coding	1418	4254	96	4349	65.0	-8805	False	ACTAAA	-45
PB.3492.8	chr14	+	3146	23	novel_not_in_catalog	SYNE2	novel	21842	116	NA	NA	437	34254	any annotated donor/acceptor	FALSE	canonical	1	7009	junction_1	36213.84434622544	NA	0	NA	TRUE	NA	NA	NA	B	coding	956	2868	278	3145	75.0	0	True	AATAGA	-42
PB.7609.5	chr22	-	1889	2	incomplete-splice_match	C22orf39	ENST00000333059.5	1221	3	-3	2322	-3	-2322	3prime_fragment	FALSE	canonical	1	166122	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.7609.4	chr22	-	1231	3	full-splice_match	C22orf39	ENST00000333059.5	1221	3	-15	5	-15	-5	multi-exon	FALSE	canonical	1	119491	junction_1	23315.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	25	342	45.0	-13	True	TTTAAA	-15
PB.1501.1	chr10	+	1253	6	full-splice_match	PRXL2A	ENST00000372185.5	1723	6	107	363	107	-362	multi-exon	FALSE	canonical	1	193542	junction_1	214399.9312766681	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	62	718	95.0	8	True	NA	NA
PB.1501.2	chr10	+	1353	6	full-splice_match	PRXL2A	ENST00000606162.5	5859	6	22	4484	21	-365	multi-exon	FALSE	canonical	1	382313	junction_1	157701.23494836685	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	132	821	90.0	-36	True	NA	NA
PB.1501.3	chr10	+	1692	6	full-splice_match	PRXL2A	ENST00000372185.5	1723	6	30	1	30	0	multi-exon	FALSE	canonical	1	193542	junction_1	214399.9312766681	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	139	795	30.0	-27	True	AATAAA	-18
PB.1501.4	chr10	+	1695	6	full-splice_match	PRXL2A	ENST00000606162.5	5859	6	45	4119	44	0	multi-exon	FALSE	canonical	1	382313	junction_1	157701.23494836685	NA	1	NA	TRUE	NA	NA	NA	C	coding	229	690	109	798	30.0	-13	True	AATAAA	-18
PB.8006.9	chr3	+	6643	16	novel_in_catalog	PDCD6IP	novel	6161	18	NA	NA	10	538	intron_retention	FALSE	canonical	1	21513	junction_10	336308.51610418013	NA	0	NA	TRUE	NA	NA	NA	C	coding	649	1950	4213	6162	10.0	-49	True	AATAAA	-14
PB.10681.2	chr7	+	5487	2	full-splice_match	PEG10	ENST00000488574.5	2587	2	0	-2900	0	-582	multi-exon	FALSE	canonical	1	90490	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	218	1423	55.0	0	True	ATTAAA	-3
PB.10681.1	chr7	+	6570	2	full-splice_match	PEG10	ENST00000482108.1	6618	2	45	3	0	0	multi-exon	FALSE	canonical	1	397571	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	435	1412	25.0	0	True	AATAAA	-30
PB.1682.1	chr10	-	1967	1	antisense	novelGene_INPP5F_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	95.0	-8693	False	NA	NA
PB.12141.1	chrX	-	2610	1	full-splice_match	NAP1L2	ENST00000373517.3	2550	1	-65	5	-65	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	460	1383	422	1804	35.0	-106	False	AATAAA	-31
PB.4888.4	chr17	-	1808	2	full-splice_match	EVI2B	ENST00000330927.4	1999	2	60	131	53	-131	multi-exon	FALSE	canonical	1	710830	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	448	1347	96	1442	40.0	0	True	AATAAA	-19
PB.4888.3	chr17	-	1937	2	full-splice_match	EVI2B	ENST00000330927.4	1999	2	59	3	52	-3	multi-exon	FALSE	canonical	1	710830	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	97	1443	20.0	-1	True	ATTAAA	-21
PB.4888.2	chr17	-	2196	2	full-splice_match	EVI2B	ENST00000330927.4	1999	2	17	-214	10	214	multi-exon	FALSE	canonical	1	710830	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	139	1485	75.0	4	True	TATAAA	-30
PB.4888.1	chr17	-	2893	2	full-splice_match	EVI2B	ENST00000330927.4	1999	2	7	-901	0	901	multi-exon	FALSE	canonical	1	710830	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	149	1495	25.0	-6	True	ATTAAA	-22
PB.11200.3	chr8	-	1678	6	full-splice_match	IL7	ENST00000520317.1	1055	6	-13	-610	0	-7	multi-exon	FALSE	canonical	1	2570	junction_4	9528.573001242106	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	640	1020	85.0	-2	True	AATAAA	-41
PB.9787.4	chr6	+	3311	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	-2	6104	-2	-6104	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	479	1876	75.0	-2	True	NA	NA
PB.9787.5	chr6	+	4110	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	-1	5304	-1	-5304	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	478	1875	75.0	-1	True	NA	NA
PB.9787.6	chr6	+	3479	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	1	5933	1	-5933	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	476	1873	95.0	1	True	NA	NA
PB.9787.7	chr6	+	3320	8	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	2	-5933	any annotated donor/acceptor	FALSE	canonical	1	19089	junction_2	70155.84063224049	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	317	1714	95.0	2	True	NA	NA
PB.11739.7	chr9	-	1931	12	full-splice_match	ALAD	ENST00000409155.7	3173	12	52	1190	3	-1188	multi-exon	FALSE	canonical	1	267115	junction_7	50737.64703398704	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	119	1138	75.0	2	True	NA	NA
PB.9787.1	chr6	+	2278	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	1	7134	1	-7134	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	476	1873	80.0	1	True	AAGAAA	-27
PB.9787.2	chr6	+	2258	8	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	-24	-7134	any annotated donor/acceptor	FALSE	canonical	1	316	junction_4	74465.41979979152	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	501	1853	80.0	0	True	AAGAAA	-27
PB.9787.3	chr6	+	2132	8	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	-11	-7134	any annotated donor/acceptor	FALSE	canonical	1	19089	junction_2	70155.84063224049	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	330	1727	80.0	-3442	False	AAGAAA	-27
PB.9787.8	chr6	+	1936	8	full-splice_match	TRIM38	ENST00000357085.4	9413	8	2	7475	2	-7475	multi-exon	FALSE	canonical	1	133615	junction_2	44875.35830292976	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	475	1872	10.0	2	True	NA	NA
PB.9787.9	chr6	+	3137	8	novel_not_in_catalog	TRIM38	novel	9413	8	NA	NA	14	-6104	any annotated donor/acceptor	FALSE	canonical	1	19089	junction_2	70155.84063224049	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	305	1702	75.0	14	True	NA	NA
PB.455.15	chr1	+	3205	5	full-splice_match	AK4	ENST00000474968.5	928	5	0	-2277	0	1825	multi-exon	FALSE	canonical	1	102	junction_4	14755.63092517565	NA	3	NA	TRUE	NA	NA	NA	C	coding	171	516	151	666	5.0	8	True	ATTAAA	-17
PB.5645.2	chr19	-	2442	2	novel_not_in_catalog	MLLT1	novel	4507	12	NA	NA	-1572	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	coding	242	729	1385	2113	20.0	4005	False	AATAAA	-16
PB.635.71	chr1	-	2789	1	novel_in_catalog	CSDE1	novel	4006	19	NA	NA	5380	-703	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	130	393	1590	1982	100.0	8518	False	NA	NA
PB.6985.1	chr2	+	1752	1	full-splice_match	AC079610.2	ENST00000604818.1	690	1	-1071	9	-1071	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-26	False	AATAAA	-14
PB.5645.1	chr19	-	3129	6	novel_not_in_catalog	MLLT1	novel	4507	12	NA	NA	-26	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	203144.2726395209	NA	1	NA	TRUE	NA	NA	NA	B	coding	53	162	306	467	15.0	-20	True	AATAAA	-18
PB.1599.18	chr10	+	5022	6	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-9	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	450313.3276990145	NA	4	1	TRUE	NA	NA	NA	C	coding	322	969	162	1130	15.0	-9582	False	AATAAA	-16
PB.8006.3	chr3	+	3050	18	full-splice_match	PDCD6IP	ENST00000307296.7	6161	18	221	2890	2	344	multi-exon	FALSE	canonical	1	21513	junction_12	322790.17155091406	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	157	2763	35.0	-61	True	ATTAAA	-19
PB.1599.13	chr10	+	5095	7	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-13	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	425429.6509664932	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	119	1198	10.0	30	True	AATAAA	-21
PB.1599.12	chr10	+	5150	7	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-14	-9	any annotated donor/acceptor	FALSE	canonical	1	628	junction_1	425226.94060769875	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	179	1258	15.0	29	True	AATAAA	-16
PB.1599.11	chr10	+	3826	7	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-14	-1216	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	425429.6509664932	NA	4	1	TRUE	NA	NA	NA	C	coding	359	1080	62	1141	20.0	29	True	AATAAA	-25
PB.1599.10	chr10	+	4029	5	novel_in_catalog	SCD	novel	5362	6	NA	NA	-14	-1216	no_combination_of_known_junctions	FALSE	canonical	1	6448	junction_2	430503.08968831744	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	898	1344	20.0	29	True	AATAAA	-25
PB.1599.17	chr10	+	5500	6	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-12	-9	any annotated donor/acceptor	FALSE	canonical	1	7487	junction_1	447738.8517341777	NA	6	1	TRUE	NA	NA	NA	C	coding	404	1215	394	1608	15.0	31	True	AATAAA	-16
PB.1599.16	chr10	+	3883	7	novel_not_in_catalog	SCD	novel	5362	6	NA	NA	-12	-1215	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	425429.6509664932	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	118	1197	20.0	31	True	AATAAA	-26
PB.1599.15	chr10	+	3791	5	novel_in_catalog	SCD	novel	5362	6	NA	NA	123	-1215	no_combination_of_known_junctions	FALSE	canonical	1	42942	junction_4	480138.1919059866	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	259	909	20.0	14	True	AATAAA	-26
PB.1599.14	chr10	+	4698	6	full-splice_match	SCD	ENST00000370355.2	5362	6	-12	676	-12	-676	multi-exon	FALSE	canonical	1	607394	junction_5	232878.32406679672	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	394	1473	40.0	31	True	NA	NA
PB.9689.17	chr6	+	3847	4	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	2	1956	intron_retention	FALSE	non_canonical	0	0	junction_3	190326.16778630894	NA	26	NA	TRUE	NA	NA	NA	C	coding	114	345	276	620	80.0	2	True	TTTAAA	-12
PB.9689.16	chr6	+	1944	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	13	3374	0	455	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	114	1469	25.0	0	True	NA	NA
PB.9689.15	chr6	+	2056	7	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	0	-4994	any annotated donor/acceptor	FALSE	canonical	1	147347	junction_1	116774.94111954082	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	114	1247	5.0	0	True	AATAAA	-14
PB.9689.14	chr6	+	2221	8	novel_in_catalog	IRF4	novel	5331	9	NA	NA	0	840	no_combination_of_known_junctions	FALSE	canonical	1	10455	junction_5	145454.39706502866	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	114	1361	45.0	0	True	AGTAAA	-19
PB.9689.13	chr6	+	2512	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	13	2806	0	1023	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	114	1469	15.0	0	True	CATAAA	-43
PB.9689.12	chr6	+	5374	10	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	0	-4	any annotated donor/acceptor	FALSE	canonical	1	9551	junction_3	166175.57257518737	NA	2	NA	TRUE	NA	NA	NA	C	coding	471	1416	114	1529	15.0	0	True	AATAAA	-20
PB.1285.1	chr10	-	1524	13	full-splice_match	KIN	ENST00000379562.8	6348	13	-23	4847	-23	5	multi-exon	FALSE	canonical	1	143756	junction_12	33499.986694856394	NA	1	NA	TRUE	NA	NA	NA	A	coding	393	1182	72	1253	35.0	-12	False	ATTAAA	-13
PB.9689.10	chr6	+	2769	9	full-splice_match	IRF4	ENST00000380956.8	5331	9	13	2549	0	1280	multi-exon	FALSE	canonical	1	147347	junction_1	86457.271549936	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1356	114	1469	25.0	0	True	NA	NA
PB.11722.19	chr9	-	4634	14	full-splice_match	PTBP3	ENST00000374257.5	7240	14	59	2547	6	1263	multi-exon	FALSE	canonical	1	259769	junction_12	122928.3672971026	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	191	1765	40.0	10	True	ATTAAA	-18
PB.11722.18	chr9	-	4650	14	novel_not_in_catalog	PTBP3	novel	7995	14	NA	NA	-6	1263	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	168158.08167088125	NA	1	1	TRUE	NA	NA	NA	C	coding	452	1359	423	1781	40.0	-13	True	ATTAAA	-18
PB.9689.18	chr6	+	5236	5	novel_not_in_catalog	IRF4	novel	5331	9	NA	NA	2	3074	intron_retention	FALSE	non_canonical	0	0	junction_4	165050.499381818	NA	1	NA	TRUE	NA	NA	NA	C	coding	259	780	112	891	80.0	2	True	NA	NA
PB.7990.1	chr3	+	3613	1	incomplete-splice_match	RBMS3	ENST00000434693.6	8540	15	725768	29	18677	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	2525	False	TTTAAA	-27
PB.11152.1	chr8	-	5134	23	novel_in_catalog	ASPH	novel	5268	25	NA	NA	2	5	no_combination_of_known_junctions	FALSE	canonical	1	54781	junction_12	826876.3015309372	NA	3	NA	TRUE	NA	NA	NA	C	coding	700	2103	224	2326	15.0	-3	True	AATAAA	-24
PB.860.28	chr1	+	2060	5	novel_not_in_catalog	SLAMF7	novel	2345	4	NA	NA	3	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	226126.37200026007	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	3	True	NA	NA
PB.597.4	chr1	+	2831	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-25	24368	-25	-24368	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	136	1200	45.0	-49	True	NA	NA
PB.1776.1	chr11	-	3236	7	full-splice_match	TRIM68	ENST00000300747.9	3352	7	39	77	11	31	multi-exon	FALSE	canonical	1	35990	junction_6	35202.551543018715	NA	0	NA	TRUE	NA	NA	NA	C	coding	485	1458	252	1709	20.0	-19	True	ATTAAA	-17
PB.1776.2	chr11	-	2860	6	full-splice_match	TRIM68	ENST00000526337.5	874	6	-19	-1967	9	0	multi-exon	FALSE	canonical	1	11182	junction_5	46111.18508388176	NA	1	NA	TRUE	NA	NA	NA	C	coding	262	789	468	1256	15.0	-49	False	AATAAA	-19
PB.1776.3	chr11	-	3854	6	novel_in_catalog	TRIM68	novel	3352	7	NA	NA	2	-4	intron_retention	FALSE	canonical	1	35990	junction_5	38546.91335710292	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	261	1112	15.0	-28	True	AATAAA	-15
PB.8277.1	chr3	+	2310	13	full-splice_match	NFKBIZ	ENST00000394054.6	3787	13	-22	1499	-20	0	multi-exon	FALSE	canonical	1	13328	junction_2	152833.42020880847	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	302	2158	80.0	-8939	False	NA	NA
PB.3172.1	chr13	-	4278	5	full-splice_match	DLEU2	ENST00000458725.5	1657	5	-13	-2608	1	2536	multi-exon	FALSE	canonical	1	22739	junction_4	24126.19962820502	NA	2	NA	TRUE	NA	NA	NA	C	coding	116	351	2819	3169	40.0	-1	True	AATAAA	-17
PB.3172.2	chr13	-	1681	5	full-splice_match	DLEU2	ENST00000458725.5	1657	5	-25	1	-11	-1	multi-exon	FALSE	canonical	1	22739	junction_4	24126.19962820502	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-13	True	ATTAAA	-19
PB.10026.3	chr6	+	1746	9	novel_not_in_catalog	CENPQ	novel	1733	9	NA	NA	1	-5	any annotated donor/acceptor	FALSE	canonical	1	21983	junction_1	52217.13044331692	NA	2	1	TRUE	NA	NA	NA	B	coding	268	807	113	919	25.0	9	True	AATAAA	-15
PB.10026.2	chr6	+	1709	9	novel_not_in_catalog	CENPQ	novel	1733	9	NA	NA	-43	-69	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	59132.42254888599	NA	0	NA	TRUE	NA	NA	NA	B	coding	268	807	140	946	20.0	-35	False	TATAAA	-20
PB.6423.2	chr2	-	5123	3	full-splice_match	CYP1B1	ENST00000610745.4	5250	3	30	97	3	-97	multi-exon	FALSE	canonical	1	290465	junction_2	36660.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	374	2005	20.0	-1	True	AATAAA	-19
PB.8079.2	chr3	-	3643	20	full-splice_match	SCAP	ENST00000441517.6	3748	20	97	8	79	0	multi-exon	FALSE	canonical	1	31086	junction_17	167040.35606068638	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	595	3510	50.0	78	True	ATTAAA	-8
PB.2473.3	chr12	+	4843	4	full-splice_match	BORCS5	ENST00000314565.8	4840	4	-3	0	-3	0	multi-exon	FALSE	canonical	1	76448	junction_1	19447.277495834733	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	335	925	20.0	0	True	ATTAAA	-18
PB.2473.2	chr12	+	2574	1	novel_in_catalog	BORCS5	novel	580	4	NA	NA	19	-76214	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	20	True	NA	NA
PB.2473.1	chr12	+	4611	4	full-splice_match	BORCS5	ENST00000314565.8	4840	4	-53	282	-11	-282	multi-exon	TRUE	canonical	1	76448	junction_1	19447.277495834733	NA	1	NA	TRUE	NA	NA	NA	C	coding	196	591	385	975	20.0	-10	True	AGTAAA	-17
PB.7049.10	chr2	+	2832	5	incomplete-splice_match	MFF	ENST00000354503.10	1085	7	19	14754	1	1900	3prime_fragment	FALSE	canonical	1	217259	junction_2	153777.824086204	NA	2	NA	TRUE	NA	NA	NA	C	coding	147	444	312	755	15.0	1	True	ATTAAA	-27
PB.7481.7	chr21	+	2333	18	novel_not_in_catalog	USP16	novel	2960	18	NA	NA	38	-4	any annotated donor/acceptor	FALSE	canonical	1	15269	junction_13	126267.95000365123	NA	0	NA	TRUE	NA	NA	NA	C	coding	636	1911	126	2036	30.0	26	True	AATAAA	-13
PB.7481.6	chr21	+	2715	18	full-splice_match	USP16	ENST00000399976.6	2963	18	47	201	20	-201	multi-exon	FALSE	canonical	1	280060	junction_9	79919.22233529428	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	144	2615	55.0	8	True	ATTAAA	-20
PB.7481.5	chr21	+	2920	18	full-splice_match	USP16	ENST00000399976.6	2963	18	39	4	12	-4	multi-exon	FALSE	canonical	1	280060	junction_9	79919.22233529428	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	152	2623	30.0	0	True	AATAAA	-13
PB.1818.5	chr11	+	2959	21	novel_in_catalog	CTR9	novel	4586	25	NA	NA	223	-161	combination_of_known_junctions	TRUE	canonical	1	11851	junction_6	122198.4111679035	NA	0	NA	TRUE	NA	NA	NA	C	coding	918	2754	204	2957	70.0	-39	True	NA	NA
PB.1700.6	chr10	-	1889	10	full-splice_match	OAT	ENST00000368845.5	2048	10	13	146	13	-146	multi-exon	FALSE	canonical	1	242417	junction_7	311181.9660370226	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	81	1400	20.0	-1	True	AGTAAA	-19
PB.1700.5	chr10	-	3891	10	novel_in_catalog	OAT	novel	1864	9	NA	NA	13	-1	intron_retention	FALSE	canonical	1	6790	junction_6	384439.06753086374	NA	4	1	TRUE	NA	NA	NA	C	coding	239	720	2534	3253	15.0	-1	True	AATAAA	-18
PB.1700.4	chr10	-	1811	9	full-splice_match	OAT	ENST00000539214.5	1864	9	53	0	13	0	multi-exon	FALSE	canonical	1	22331	junction_8	390590.0038386639	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	267	1172	20.0	-1	True	AATAAA	-19
PB.1299.4	chr10	+	3396	14	full-splice_match	OPTN	ENST00000378757.6	3321	14	-78	3	-68	-3	multi-exon	FALSE	canonical	1	553620	junction_1	225346.40283773188	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	224	1957	35.0	-72	True	ATTAAA	-16
PB.1700.2	chr10	-	2152	11	novel_in_catalog	OAT	novel	1864	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	4485	junction_6	414931.4373556672	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	794	1513	20.0	0	True	AATAAA	-19
PB.1700.1	chr10	-	2042	10	full-splice_match	OAT	ENST00000368845.5	2048	10	10	-4	10	0	multi-exon	FALSE	canonical	1	242417	junction_7	311181.9660370226	NA	0	NA	TRUE	NA	NA	NA	C	coding	439	1320	84	1403	20.0	-4	True	AATAAA	-19
PB.1299.7	chr10	+	3572	16	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-39	-4	combination_of_known_junctions	FALSE	canonical	1	49949	junction_3	399422.1493964945	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	401	2134	35.0	-43	True	ATTAAA	-15
PB.1299.8	chr10	+	2474	15	novel_in_catalog	OPTN	novel	2464	15	NA	NA	-38	150	combination_of_known_junctions	FALSE	canonical	1	122718	junction_2	385536.581035835	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	346	2061	80.0	-42	True	NA	NA
PB.2752.2	chr12	-	2761	9	full-splice_match	CPM	ENST00000551568.5	6655	9	29	3865	1	717	multi-exon	FALSE	canonical	1	92964	junction_8	17912.26992481341	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	33	1364	85.0	0	True	NA	NA
PB.2752.1	chr12	-	3361	9	full-splice_match	CPM	ENST00000551568.5	6655	9	28	3266	0	1316	multi-exon	FALSE	canonical	1	92964	junction_8	17912.26992481341	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	34	1365	30.0	-1	True	NA	NA
PB.1040.10	chr1	-	4837	27	novel_in_catalog	KDM5B	novel	10341	27	NA	NA	1	-181	combination_of_known_junctions	FALSE	canonical	1	21675	junction_1	121241.36729400986	NA	1	NA	TRUE	NA	NA	NA	C	coding	1513	4542	116	4657	75.0	0	True	NA	NA
PB.7500.7	chr21	-	3707	22	full-splice_match	GART	ENST00000381815.8	3341	22	27	-393	3	393	multi-exon	FALSE	canonical	1	420544	junction_10	165943.73993498512	NA	3	NA	TRUE	NA	NA	NA	C	coding	1010	3033	89	3121	50.0	0	True	NA	NA
PB.7500.6	chr21	-	3713	21	novel_in_catalog	GART	novel	3341	22	NA	NA	-3	531	no_combination_of_known_junctions	FALSE	canonical	1	13829	junction_4	220905.5052408778	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2895	95	2989	90.0	-6	True	NA	NA
PB.2752.5	chr12	-	1961	8	novel_in_catalog	CPM	novel	697	2	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3178	junction_7	53505.52525922259	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	313	1281	90.0	-33	True	NA	NA
PB.2752.4	chr12	-	2045	9	full-splice_match	CPM	ENST00000551568.5	6655	9	28	4582	0	0	multi-exon	FALSE	canonical	1	92964	junction_8	17912.26992481341	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	34	1365	90.0	-1	True	NA	NA
PB.11562.3	chr9	+	1340	6	novel_not_in_catalog	FRG1HP	novel	593	4	NA	NA	0	5135	any annotated donor/acceptor	FALSE	canonical	1	590	junction_3	20234.46394644543	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	NA	False	AATAAA	-11
PB.1219.38	chr1	-	4483	4	novel_in_catalog	LYST	novel	13480	53	NA	NA	17	-17356	intron_retention	FALSE	canonical	1	105068	junction_1	42889.89441193189	NA	1	NA	TRUE	NA	NA	NA	C	coding	451	1353	3129	4481	60.0	-1	True	NA	NA
PB.1219.39	chr1	-	2035	5	incomplete-splice_match	LYST	ENST00000389794.7	12985	53	33	147879	-15	-17356	3prime_fragment	FALSE	canonical	1	105068	junction_2	44275.38122012616	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1887	147	2033	60.0	11	True	NA	NA
PB.11889.3	chr9	-	2815	13	novel_not_in_catalog	BRD3	novel	5652	12	NA	NA	19	520	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	70606.93230419887	NA	6	NA	TRUE	NA	NA	NA	C	coding	726	2181	168	2348	90.0	0	True	NA	NA
PB.1219.36	chr1	-	3245	6	incomplete-splice_match	LYST	ENST00000389794.7	12985	53	-13	145033	-13	-14510	3prime_fragment	FALSE	canonical	1	101502	junction_1	43633.98753265624	NA	1	NA	TRUE	NA	NA	NA	C	coding	1017	3051	193	3243	55.0	-9	True	AAAAAG	-18
PB.1219.37	chr1	-	2142	5	incomplete-splice_match	LYST	ENST00000465349.5	5220	12	298	17356	274	-17356	3prime_fragment	FALSE	canonical	1	9706	junction_4	70547.8625982921	NA	0	NA	TRUE	NA	NA	NA	C	coding	629	1887	254	2140	60.0	-7	True	NA	NA
PB.1219.30	chr1	-	4804	12	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	1588	-195	any annotated donor/acceptor	FALSE	canonical	1	4582	junction_11	46911.42562900273	NA	0	NA	TRUE	NA	NA	NA	C	coding	1491	4473	331	4803	70.0	7005	False	NA	NA
PB.1219.31	chr1	-	4631	12	incomplete-splice_match	LYST	ENST00000389793.6	13480	53	18	130727	18	-195	3prime_fragment	FALSE	canonical	1	78139	junction_1	38110.9259585947	NA	0	NA	TRUE	NA	NA	NA	C	coding	1491	4473	158	4630	70.0	0	True	NA	NA
PB.5014.13	chr17	+	4113	17	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	4	-220	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	249987.92999380958	NA	6	1	TRUE	NA	NA	NA	B	coding	805	2418	301	2718	25.0	-8	True	AATAAA	-17
PB.5014.12	chr17	+	4224	18	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	4	-220	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	242366.69385002635	NA	22	3	TRUE	NA	NA	NA	B	coding	842	2529	301	2829	25.0	-8	True	AATAAA	-17
PB.5014.11	chr17	+	4389	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	4	-220	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	208588.41741559232	NA	6	1	TRUE	NA	NA	NA	B	coding	897	2694	301	2994	25.0	-8	True	AATAAA	-17
PB.5014.10	chr17	+	3012	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	0	118	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	208588.41741559232	NA	17	1	TRUE	NA	NA	NA	B	coding	842	2529	447	2975	25.0	11	True	ATTAAA	-19
PB.5014.17	chr17	+	4210	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	0	-391	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	208588.41741559232	NA	7	1	TRUE	NA	NA	NA	B	coding	842	2529	458	2986	55.0	0	True	NA	NA
PB.5014.16	chr17	+	4328	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	0	-221	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	251132.36511393578	NA	3	1	TRUE	NA	NA	NA	B	coding	897	2694	241	2934	25.0	0	True	AATAAA	-16
PB.5014.15	chr17	+	2552	14	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	5	4645	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	241632.5422523084	NA	6	1	TRUE	NA	NA	NA	B	coding	714	2145	300	2444	20.0	-7	True	AATAAA	-17
PB.5014.14	chr17	+	3182	14	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	4	4645	intron_retention	FALSE	canonical	0	0	junction_3	221937.52064182173	NA	6	1	TRUE	NA	NA	NA	B	coding	495	1488	301	1788	20.0	-8	True	AATAAA	-17
PB.426.2	chr1	+	4618	5	full-splice_match	TCEANC2	ENST00000234827.5	10436	5	-22	5840	-5	3749	multi-exon	FALSE	canonical	1	83108	junction_4	19041.66498760022	NA	1	NA	TRUE	NA	NA	NA	C	coding	208	627	223	849	80.0	-58	True	NA	NA
PB.5014.19	chr17	+	4597	19	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	2	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	208588.41741559232	NA	6	1	TRUE	NA	NA	NA	B	coding	842	2529	456	2984	15.0	2	True	AATAAA	-18
PB.5014.18	chr17	+	2711	15	novel_not_in_catalog	NBR1	novel	4656	21	NA	NA	0	4646	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	214958.85744875335	NA	6	1	TRUE	NA	NA	NA	B	coding	714	2145	458	2602	20.0	0	True	AATAAA	-18
PB.4060.11	chr15	+	2426	2	full-splice_match	AEN	ENST00000557927.1	5039	2	2612	1	2612	-1	multi-exon	FALSE	canonical	1	298311	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	63	192	249	440	10.0	-9822	False	AATAAA	-17
PB.9616.5	chr5	+	3594	10	novel_in_catalog	NPM1	novel	1338	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	9853	junction_4	1345214.1598836342	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	115	933	20.0	4	True	AATAAA	-20
PB.9616.4	chr5	+	1201	10	full-splice_match	NPM1	ENST00000393820.2	1598	10	1	396	0	-396	multi-exon	FALSE	canonical	1	9853	junction_4	1343865.3867701516	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	116	877	50.0	3	True	AATAAA	-19
PB.9616.3	chr5	+	1212	10	full-splice_match	NPM1	ENST00000351986.10	1237	10	23	2	0	-1	multi-exon	FALSE	canonical	1	9853	junction_4	1330297.4470643774	NA	0	NA	TRUE	NA	NA	NA	C	coding	259	780	116	895	20.0	3	True	AATAAA	-20
PB.9616.2	chr5	+	1296	11	full-splice_match	NPM1	ENST00000296930.9	1758	11	204	258	0	-4	multi-exon	FALSE	canonical	1	9853	junction_4	1289169.6102916985	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	116	982	25.0	3	True	AATAAA	-17
PB.9616.1	chr5	+	2606	11	novel_in_catalog	NPM1	novel	1338	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	9853	junction_4	1282797.9430085667	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	119	880	20.0	0	True	AATAAA	-21
PB.11152.5	chr8	-	5315	25	full-splice_match	ASPH	ENST00000379454.8	5268	25	-48	1	-11	-1	multi-exon	FALSE	canonical	1	345915	junction_11	788805.9099981968	NA	2	NA	TRUE	NA	NA	NA	C	coding	758	2277	237	2513	15.0	-1	True	AATAAA	-18
PB.597.8	chr1	+	3954	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-7	23227	-7	-23227	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	118	1182	40.0	-31	True	ATTAAA	-38
PB.426.3	chr1	+	1653	5	full-splice_match	TCEANC2	ENST00000234827.5	10436	5	-8	8791	6	798	multi-exon	FALSE	canonical	1	83108	junction_4	19041.66498760022	NA	0	NA	TRUE	NA	NA	NA	C	coding	208	627	209	835	30.0	-44	True	TTTAAA	-5
PB.11723.1	chr9	-	3629	1	intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-100	False	NA	NA
PB.10085.3	chr6	-	2125	14	full-splice_match	ME1	ENST00000369705.3	3371	14	-115	1361	-115	-1361	multi-exon	FALSE	canonical	1	167834	junction_13	54395.36702480565	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	233	1951	15.0	-8	True	TATAAA	-24
PB.2667.2	chr12	+	1581	13	full-splice_match	PA2G4	ENST00000303305.10	2577	13	250	746	32	-746	multi-exon	FALSE	canonical	1	224251	junction_10	268845.51271021186	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	170	1354	70.0	3	True	TTTAAA	-3
PB.2667.3	chr12	+	2374	13	full-splice_match	PA2G4	ENST00000303305.10	2577	13	247	-44	29	-2	multi-exon	FALSE	canonical	1	224251	junction_10	268845.51271021186	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	173	1357	20.0	0	True	AATAAA	-16
PB.2667.1	chr12	+	1280	12	incomplete-splice_match	PA2G4	ENST00000303305.10	2577	13	240	2350	22	2	3prime_fragment	FALSE	canonical	1	224251	junction_10	272883.31204484083	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1101	180	1280	75.0	-7	True	NA	NA
PB.7076.14	chr2	+	3806	29	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	0	-3	no_combination_of_known_junctions	FALSE	canonical	1	3496	junction_5	132752.06205641248	NA	0	NA	TRUE	NA	NA	NA	C	coding	1090	3270	535	3804	80.0	0	True	NA	NA
PB.2667.4	chr12	+	3462	1	novel_in_catalog	AC034102.2	novel	489	6	NA	NA	3236	-1261	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	1	True	NA	NA
PB.160.1	chr1	-	4107	25	full-splice_match	ASAP3	ENST00000336689.7	4050	25	-60	3	-46	-3	multi-exon	FALSE	canonical	1	57345	junction_24	31012.851346928204	NA	0	NA	TRUE	NA	NA	NA	A	coding	903	2712	106	2817	15.0	-60	True	AATAAA	-15
PB.2205.1	chr11	-	4376	20	novel_in_catalog	SYTL2	novel	4123	18	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	1	53650	junction_19	70430.72442932763	NA	1	NA	TRUE	NA	NA	NA	A	coding	951	2856	605	3460	35.0	-2	True	AATAAA	-27
PB.9246.6	chr5	+	6100	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	249	-3810	-41	3103	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	2	NA	TRUE	NA	NA	NA	C	coding	706	2121	63	2183	90.0	-33	True	NA	NA
PB.9166.11	chr5	-	4214	18	novel_not_in_catalog	ZFR	novel	4738	20	NA	NA	7	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	210125.53984770784	NA	2	1	TRUE	NA	NA	NA	C	coding	583	1752	1054	2805	20.0	8	True	AGTAAA	-16
PB.9166.10	chr5	-	4257	18	novel_not_in_catalog	ZFR	novel	4738	20	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_17	210125.53984770784	NA	4	1	TRUE	NA	NA	NA	C	coding	911	2736	113	2848	20.0	3	True	AGTAAA	-16
PB.9166.18	chr5	-	4580	20	full-splice_match	ZFR	ENST00000265069.12	4738	20	61	97	38	-96	multi-exon	FALSE	canonical	1	314024	junction_18	154466.51958428402	NA	1	NA	TRUE	NA	NA	NA	C	coding	1074	3225	43	3267	45.0	-16	True	AATACA	-16
PB.11428.4	chr9	-	2311	19	novel_not_in_catalog	PUM3	novel	340	4	NA	NA	137	7	any annotated donor/acceptor	FALSE	canonical	1	1238	junction_15	142366.8736047062	NA	0	NA	TRUE	NA	NA	NA	C	coding	688	2067	71	2137	30.0	-10	True	TATAAA	-25
PB.636.2	chr1	-	5436	5	novel_not_in_catalog	SIKE1	novel	5506	5	NA	NA	1	-7	any annotated donor/acceptor	FALSE	canonical	1	2048	junction_4	158603.3449757602	NA	1	NA	TRUE	NA	NA	NA	C	coding	193	582	70	651	50.0	-31	True	AATAAA	-14
PB.11428.6	chr9	-	2147	18	full-splice_match	PUM3	ENST00000397885.2	2321	18	177	-3	177	3	multi-exon	FALSE	canonical	1	194131	junction_2	89718.41270862418	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	31	1977	30.0	30	True	TATAAA	-21
PB.11428.7	chr9	-	1962	18	full-splice_match	PUM3	ENST00000397885.2	2321	18	150	209	150	-206	multi-exon	FALSE	canonical	1	194131	junction_2	89718.41270862418	NA	1	NA	TRUE	NA	NA	NA	C	coding	635	1905	58	1962	50.0	3	True	NA	NA
PB.636.7	chr1	-	5239	5	full-splice_match	SIKE1	ENST00000060969.5	2190	5	29	-3078	-14	-218	multi-exon	FALSE	canonical	1	259561	junction_4	53413.73605812928	NA	2	NA	TRUE	NA	NA	NA	C	coding	207	624	42	665	15.0	-3	True	NA	NA
PB.7742.42	chr22	-	6613	40	novel_not_in_catalog	MYH9	novel	7554	41	NA	NA	49	-369	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1162239.492090416	NA	0	NA	TRUE	NA	NA	NA	C	coding	1915	5748	232	5979	10.0	-15	False	AATAAA	-14
PB.636.5	chr1	-	5477	5	full-splice_match	SIKE1	ENST00000060969.5	2190	5	1	-3288	1	-8	multi-exon	FALSE	canonical	1	259561	junction_4	53413.73605812928	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	70	693	50.0	-31	True	AATAAA	-13
PB.11428.3	chr9	-	2415	20	novel_not_in_catalog	PUM3	novel	340	4	NA	NA	158	7	any annotated donor/acceptor	FALSE	canonical	1	254	junction_19	169249.0896140362	NA	4	1	TRUE	NA	NA	NA	C	coding	688	2067	175	2241	30.0	11	True	TATAAA	-25
PB.12091.20	chrX	-	2591	16	incomplete-splice_match	SMC1A	ENST00000322213.8	9784	25	63	25476	4	12370	3prime_fragment	FALSE	canonical	1	370159	junction_15	163993.7755476781	NA	0	NA	TRUE	NA	NA	NA	C	coding	842	2526	66	2591	65.0	-12	True	GATAAA	-25
PB.636.9	chr1	-	2902	4	full-splice_match	SIKE1	ENST00000510745.5	349	4	-135	-2418	-13	848	multi-exon	FALSE	canonical	1	37846	junction_3	141464.20675916577	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	247	558	40.0	-2	True	NA	NA
PB.9823.2	chr6	-	2812	4	full-splice_match	ZSCAN31	ENST00000344279.10	2619	4	14	-207	14	0	multi-exon	FALSE	canonical	1	7081	junction_3	26749.45690414418	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	166	1386	25.0	-4	True	AATAAA	-27
PB.5771.3	chr19	+	1647	10	full-splice_match	CCDC130	ENST00000221554.12	1792	10	144	1	26	-1	multi-exon	FALSE	canonical	1	165312	junction_1	91716.82716376345	NA	0	NA	TRUE	NA	NA	NA	C	coding	396	1191	234	1424	10.0	10	True	ATTAAA	-16
PB.5771.2	chr19	+	3516	11	novel_not_in_catalog	CCDC130	novel	995	8	NA	NA	25	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	129030.01128745204	NA	2	NA	TRUE	NA	NA	NA	C	coding	242	729	235	963	5.0	9	True	ATTAAA	-14
PB.5771.1	chr19	+	1789	9	full-splice_match	CCDC130	ENST00000593174.5	1783	9	8	-14	8	1	multi-exon	FALSE	canonical	1	165312	junction_1	85963.69233250454	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	809	1564	10.0	-2	True	ATTAAA	-18
PB.12091.21	chrX	-	2664	17	novel_not_in_catalog	SMC1A	novel	9784	25	NA	NA	-5	12370	any annotated donor/acceptor	FALSE	canonical	1	2096	junction_1	265350.6791836321	NA	0	NA	TRUE	NA	NA	NA	C	coding	831	2496	75	2570	65.0	-21	True	GATAAA	-25
PB.3412.9	chr14	+	2507	1	full-splice_match	MGAT2	ENST00000305386.3	2687	1	18	162	18	-162	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	447	1344	457	1800	35.0	-4	True	AATAAA	-17
PB.3412.8	chr14	+	1702	2	antisense	novelGene_AL139099.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	447	1344	272	1615	40.0	-16	True	AATAAA	-17
PB.9628.4	chr5	+	2598	11	full-splice_match	SFXN1	ENST00000321442.9	4231	11	141	1492	-28	1367	multi-exon	FALSE	canonical	1	522527	junction_7	115766.51700487494	NA	3	NA	TRUE	NA	NA	NA	C	coding	322	969	114	1082	70.0	-33	True	NA	NA
PB.5005.7	chr17	-	2136	12	full-splice_match	BECN1	ENST00000361523.8	2112	12	-24	0	0	0	multi-exon	FALSE	canonical	1	211102	junction_11	195586.51130580774	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	158	1510	10.0	-7	True	AATAAA	-25
PB.9628.6	chr5	+	2966	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-4	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	90	1058	45.0	-9	True	AATAAA	-6
PB.9628.7	chr5	+	2949	12	novel_not_in_catalog	SFXN1	novel	572	4	NA	NA	-24	-8	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	224155.13168015017	NA	2	NA	TRUE	NA	NA	NA	C	coding	322	969	110	1078	40.0	-29	True	AATAAA	-10
PB.3412.3	chr14	+	2208	2	antisense	novelGene_AL139099.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	B	coding	456	1371	131	1501	35.0	-63	True	AATAAA	-17
PB.3412.2	chr14	+	3340	1	full-splice_match	MGAT2	ENST00000305386.3	2687	1	-44	-609	-44	609	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	447	1344	519	1862	80.0	-66	True	NA	NA
PB.3412.1	chr14	+	2377	2	antisense	novelGene_AL139099.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	447	1344	327	1670	35.0	2	True	AATAAA	-17
PB.5005.6	chr17	-	2111	12	full-splice_match	BECN1	ENST00000590099.5	2087	12	-21	-3	-2	0	multi-exon	FALSE	canonical	1	370275	junction_11	161299.29641308225	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1353	133	1485	10.0	-4	True	AATAAA	-25
PB.3412.7	chr14	+	2490	2	antisense	novelGene_AL139099.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	B	coding	447	1344	279	1622	30.0	-18	True	AATAAA	-20
PB.3412.6	chr14	+	2582	1	full-splice_match	MGAT2	ENST00000305386.3	2687	1	104	1	104	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	447	1344	371	1714	30.0	82	False	AATAAA	-20
PB.3412.5	chr14	+	4193	1	full-splice_match	MGAT2	ENST00000305386.3	2687	1	-26	-1480	-26	1480	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	447	1344	501	1844	40.0	-48	True	AATATA	-33
PB.3412.4	chr14	+	1935	1	full-splice_match	MGAT2	ENST00000305386.3	2687	1	-30	782	-30	-782	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	447	1344	505	1848	40.0	-52	True	AATAAA	-17
PB.611.2	chr1	-	4246	13	novel_not_in_catalog	DENND2D	novel	950	4	NA	NA	-3	2300	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	128096.20882790924	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	186	1592	90.0	-1	True	NA	NA
PB.611.1	chr1	-	4193	12	full-splice_match	DENND2D	ENST00000369752.5	1894	12	5	-2304	5	2304	multi-exon	FALSE	canonical	1	66144	junction_11	106535.39179443322	NA	1	NA	TRUE	NA	NA	NA	C	coding	468	1407	52	1458	100.0	133	False	NA	NA
PB.2879.9	chr12	-	4892	10	novel_in_catalog	CORO1C	novel	3892	11	NA	NA	0	2	intron_retention	FALSE	canonical	1	863290	junction_9	126659.57402374501	NA	3	NA	TRUE	NA	NA	NA	C	coding	452	1359	96	1454	25.0	-1	True	GATAAA	-14
PB.611.7	chr1	-	2225	14	novel_not_in_catalog	DENND2D	novel	950	4	NA	NA	8	-7	any annotated donor/acceptor	FALSE	canonical	1	11942	junction_7	157694.42626044038	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	175	831	15.0	10	True	AGTAAA	-13
PB.611.4	chr1	-	1888	12	full-splice_match	DENND2D	ENST00000369752.5	1894	12	4	2	4	-2	multi-exon	FALSE	canonical	1	66144	junction_11	106535.39179443322	NA	0	NA	TRUE	NA	NA	NA	C	coding	468	1407	53	1459	10.0	132	False	AGTAAA	-18
PB.611.5	chr1	-	1909	12	novel_not_in_catalog	DENND2D	novel	950	4	NA	NA	-85	-2	any annotated donor/acceptor	FALSE	canonical	1	8529	junction_11	117763.43686840092	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	605	1480	10.0	-83	False	AGTAAA	-18
PB.2879.5	chr12	-	3610	10	novel_in_catalog	CORO1C	novel	3892	11	NA	NA	1	-3	intron_retention	FALSE	canonical	1	3281	junction_9	380218.6343051704	NA	2	1	TRUE	NA	NA	NA	C	coding	369	1110	210	1319	20.0	0	True	GATAAA	-15
PB.7937.3	chr3	+	2354	19	novel_in_catalog	ATG7	novel	972	8	NA	NA	-6	76	combination_of_known_junctions	FALSE	canonical	1	6521	junction_18	62380.61553078809	NA	0	NA	TRUE	NA	NA	NA	C	coding	738	2217	45	2261	35.0	0	True	TTTAAA	-31
PB.7937.2	chr3	+	2400	19	full-splice_match	ATG7	ENST00000354449.7	4959	19	-24	2583	10	-1	multi-exon	FALSE	canonical	1	112322	junction_1	43218.339780213966	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	50	2161	15.0	-5	True	NA	NA
PB.2879.1	chr12	-	3866	12	novel_not_in_catalog	CORO1C	novel	3892	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2168	junction_10	471131.11814333784	NA	4	NA	TRUE	NA	NA	NA	C	coding	474	1425	149	1573	10.0	-1	True	GATAAA	-17
PB.7937.4	chr3	+	2748	21	novel_in_catalog	ATG7	novel	972	8	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	13393	junction_2	77160.38467348383	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	398	2509	15.0	2	True	NA	NA
PB.2879.3	chr12	-	3808	11	full-splice_match	CORO1C	ENST00000261401.7	3892	11	78	6	0	0	multi-exon	FALSE	canonical	1	863290	junction_10	127763.90585983195	NA	87	3	TRUE	NA	NA	NA	C	coding	474	1425	96	1520	25.0	-1	True	GATAAA	-12
PB.2879.2	chr12	-	4047	11	novel_in_catalog	CORO1C	novel	3892	11	NA	NA	81	-3	intron_retention	FALSE	canonical	1	15342	junction_10	366011.60562288185	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	332	1756	20.0	1457	False	GATAAA	-15
PB.403.2	chr1	-	3575	31	full-splice_match	NRDC	ENST00000352171.11	3691	31	54	62	20	-36	multi-exon	FALSE	canonical	1	742738	junction_25	333781.19475022855	NA	2	NA	TRUE	NA	NA	NA	C	coding	1146	3438	137	3574	65.0	-2	True	NA	NA
PB.1345.8	chr10	+	2115	14	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-211	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	441557.9046634687	NA	1	1	TRUE	NA	NA	NA	C	coding	541	1626	136	1761	95.0	0	True	NA	NA
PB.1345.9	chr10	+	2411	15	novel_not_in_catalog	WAC	novel	5924	14	NA	NA	-195	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	348519.0868861037	NA	0	NA	TRUE	NA	NA	NA	C	coding	645	1938	120	2057	95.0	-13	True	NA	NA
PB.1345.6	chr10	+	3061	14	full-splice_match	WAC	ENST00000375664.8	5924	14	283	2580	0	-11	multi-exon	FALSE	canonical	1	122302	junction_1	320334.2296313013	NA	2	NA	TRUE	NA	NA	NA	C	coding	602	1809	327	2135	50.0	-3	True	AATAAA	-10
PB.1345.7	chr10	+	2748	13	novel_in_catalog	WAC	novel	5924	14	NA	NA	1	-14	combination_of_known_junctions	FALSE	canonical	1	122302	junction_1	394148.891533064	NA	15	1	TRUE	NA	NA	NA	C	coding	499	1500	326	1825	65.0	-2	True	AATAAA	-7
PB.1345.4	chr10	+	3220	13	novel_in_catalog	WAC	novel	5924	14	NA	NA	-9	448	combination_of_known_junctions	FALSE	canonical	1	122302	junction_1	433562.34387285163	NA	2	NA	TRUE	NA	NA	NA	C	coding	498	1497	339	1835	30.0	-15	True	AATAAA	-21
PB.1345.2	chr10	+	3562	14	full-splice_match	WAC	ENST00000375664.8	5924	14	241	2121	-39	448	multi-exon	FALSE	canonical	1	122302	junction_1	320334.2296313013	NA	2	NA	TRUE	NA	NA	NA	C	coding	602	1809	369	2177	30.0	-8714	False	AATAAA	-21
PB.1345.3	chr10	+	2203	13	novel_in_catalog	WAC	novel	5924	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	122302	junction_1	394148.891533064	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	350	1849	95.0	-26	True	NA	NA
PB.1345.1	chr10	+	2497	14	full-splice_match	WAC	ENST00000375664.8	5924	14	275	3152	-5	0	multi-exon	FALSE	canonical	1	122302	junction_1	320334.2296313013	NA	0	NA	TRUE	NA	NA	NA	C	coding	602	1809	335	2143	95.0	-11	True	NA	NA
PB.12265.10	chrX	-	2724	15	full-splice_match	ENOX2	ENST00000394363.5	4174	15	64	1386	-19	-869	multi-exon	FALSE	canonical	1	60826	junction_12	17126.7408208	NA	1	NA	TRUE	NA	NA	NA	C	coding	581	1746	436	2181	20.0	-20	True	TTTAAA	-5
PB.12265.11	chrX	-	1892	13	novel_not_in_catalog	ENOX2	novel	3963	14	NA	NA	1	-11163	intron_retention	FALSE	canonical	1	265	junction_10	39517.64518426829	NA	3	1	TRUE	NA	NA	NA	C	coding	446	1338	555	1892	60.0	0	True	NA	NA
PB.12265.12	chrX	-	1773	12	incomplete-splice_match	ENOX2	ENST00000394363.5	4174	15	64	11680	-19	-11163	3prime_fragment	FALSE	canonical	1	60826	junction_9	18466.49599313478	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1281	493	1773	60.0	-20	True	NA	NA
PB.12265.13	chrX	-	3148	2	incomplete-splice_match	ENOX2	ENST00000492263.1	819	7	-32	219114	10	-219114	3prime_fragment	FALSE	canonical	1	69169	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	9	True	NA	NA
PB.8257.33	chr3	+	1881	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-12	99	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	155	1150	15.0	-43	False	NA	NA
PB.8257.32	chr3	+	1923	7	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-12	-169	combination_of_known_junctions	FALSE	canonical	1	3524	junction_6	55428.55471385364	NA	6	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-43	False	NA	NA
PB.8257.31	chr3	+	2334	10	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-12	-309	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	47006.86496436215	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	155	1150	45.0	-43	False	TTTAAA	-7
PB.8257.30	chr3	+	2405	11	novel_in_catalog	ST3GAL6	novel	804	5	NA	NA	-13	-309	combination_of_known_junctions	FALSE	canonical	1	24937	junction_1	56773.51143702492	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	484	1221	45.0	-44	False	TTTAAA	-7
PB.9959.3	chr6	+	2113	3	full-splice_match	CDKN1A	ENST00000244741.9	2180	3	59	8	-4	-6	multi-exon	FALSE	canonical	1	1827779	junction_2	267658.5	NA	13	NA	TRUE	NA	NA	NA	C	coding	164	495	88	582	30.0	3	True	NA	NA
PB.9959.2	chr6	+	2239	4	novel_in_catalog	CDKN1A	novel	2102	3	NA	NA	3	-6	no_combination_of_known_junctions	FALSE	canonical	1	98	junction_1	860552.9089521457	NA	0	NA	TRUE	NA	NA	NA	C	coding	235	708	1	708	30.0	0	True	NA	NA
PB.9959.1	chr6	+	1672	1	genic	CDKN1A	novel	NA	NA	NA	NA	-15	-2741	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-9942	False	NA	NA
PB.9959.7	chr6	+	2229	3	novel_not_in_catalog	CDKN1A	novel	2102	3	NA	NA	4	0	any annotated donor/acceptor	FALSE	canonical	1	1614	junction_1	913082.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	198	692	30.0	0	True	NA	NA
PB.9959.6	chr6	+	3326	2	incomplete-splice_match	CDKN1A	ENST00000244741.9	2180	3	56	2	4	0	intron_retention	FALSE	canonical	1	2363096	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	91	693	30.0	0	True	NA	NA
PB.9959.5	chr6	+	2143	1	novel_in_catalog	CDKN1A	novel	2102	3	NA	NA	0	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	157	474	183	656	30.0	-4	True	AATAAA	-24
PB.9959.4	chr6	+	2267	3	full-splice_match	CDKN1A	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	1	64559	junction_1	881610.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	164	495	236	730	30.0	-4	True	NA	NA
PB.4204.11	chr16	-	2730	4	full-splice_match	ZSCAN32	ENST00000618425.4	2788	4	53	5	1	-1	multi-exon	FALSE	canonical	1	17483	junction_2	34234.17638689281	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	873	1964	5.0	-15	True	AATAAA	-16
PB.4204.10	chr16	-	3004	7	novel_not_in_catalog	ZSCAN32	novel	3173	7	NA	NA	-3	-1	any annotated donor/acceptor	FALSE	canonical	1	5542	junction_6	26842.74875030913	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	148	2238	5.0	-1	True	AATAAA	-16
PB.4204.12	chr16	-	2931	6	novel_in_catalog	ZSCAN32	novel	3173	7	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	8902	junction_4	31480.87367656749	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	1077	2168	5.0	0	True	AATAAA	-13
PB.6182.9	chr19	+	2304	5	full-splice_match	ZNF480	ENST00000595962.5	4738	5	2	2432	0	-190	multi-exon	FALSE	canonical	1	179014	junction_1	24378.225964731315	NA	2	NA	TRUE	NA	NA	NA	C	coding	535	1608	65	1672	65.0	10	True	NA	NA
PB.7608.1	chr22	+	1401	3	full-splice_match	MRPL40	ENST00000471259.1	942	3	-397	-62	-37	-3	multi-exon	FALSE	canonical	1	554533	junction_1	140485.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	162	489	803	1291	15.0	-7	True	AATAAA	-15
PB.3527.2	chr14	+	4301	6	full-splice_match	SUSD6	ENST00000342745.4	5388	6	91	996	49	-996	multi-exon	FALSE	canonical	1	111069	junction_1	43699.75092102929	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	223	1134	50.0	-11	True	TATAAA	-19
PB.3527.3	chr14	+	4591	6	full-splice_match	SUSD6	ENST00000342745.4	5388	6	96	701	54	-701	multi-exon	FALSE	canonical	1	111069	junction_1	43699.75092102929	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	218	1129	70.0	-6	True	AATGAA	-41
PB.2691.3	chr12	-	4901	4	novel_not_in_catalog	NEMP1	novel	5370	8	NA	NA	14642	-1	any annotated donor/acceptor	FALSE	canonical	1	1208	junction_2	111213.49210415075	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	1	True	AATAAA	-13
PB.2691.2	chr12	-	5401	8	full-splice_match	NEMP1	ENST00000379391.7	5370	8	-31	0	-25	0	multi-exon	FALSE	canonical	1	14246	junction_5	72435.23198678659	NA	1	NA	TRUE	NA	NA	NA	C	coding	371	1116	50	1165	15.0	-4	True	AATAAA	-14
PB.2691.5	chr12	-	5486	9	novel_not_in_catalog	NEMP1	novel	5370	8	NA	NA	-55	-1	any annotated donor/acceptor	FALSE	canonical	1	1147	junction_8	74155.40339339744	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	67	1251	20.0	9798	False	AATAAA	-13
PB.2691.4	chr12	-	5589	9	full-splice_match	NEMP1	ENST00000300128.8	5590	9	5	-4	-1	-1	multi-exon	FALSE	canonical	1	104793	junction_6	50754.546938550244	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	20	1354	20.0	-1	True	AATAAA	-13
PB.3527.4	chr14	+	4341	6	novel_not_in_catalog	SUSD6	novel	5388	6	NA	NA	-3	-996	any annotated donor/acceptor	FALSE	canonical	1	2538	junction_3	86672.02483016074	NA	1	NA	TRUE	NA	NA	NA	C	coding	285	858	317	1174	50.0	-3	True	TATAAA	-19
PB.2691.6	chr12	-	5442	9	novel_in_catalog	NEMP1	novel	5370	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	7189	junction_6	71168.97947095701	NA	1	NA	TRUE	NA	NA	NA	C	coding	253	762	446	1207	20.0	0	True	AATAAA	-13
PB.2691.9	chr12	-	3522	9	full-splice_match	NEMP1	ENST00000300128.8	5590	9	-23	2091	-23	1851	multi-exon	FALSE	canonical	1	104793	junction_6	50754.546938550244	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	48	1382	35.0	-2	True	AATAAA	-9
PB.2691.8	chr12	-	4879	9	full-splice_match	NEMP1	ENST00000300128.8	5590	9	-24	735	-24	-735	multi-exon	FALSE	canonical	1	104793	junction_6	50754.546938550244	NA	1	NA	TRUE	NA	NA	NA	C	coding	444	1335	49	1383	15.0	-3	True	AATAAA	-37
PB.10518.3	chr7	-	2666	11	novel_in_catalog	POLM	novel	2444	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	40683	junction_4	39386.84976499136	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	202	1854	20.0	-15	True	AAAACA	-7
PB.6540.1	chr2	-	2035	3	full-splice_match	ATP6V1B1-AS1	ENST00000422761.1	1129	3	-11	-895	-11	885	multi-exon	FALSE	canonical	1	3206	junction_2	977.5	NA	3	NA	TRUE	NA	NA	NA	A	coding	107	324	984	1307	95.0	NA	False	NA	NA
PB.8458.28	chr3	-	2225	7	incomplete-splice_match	HLTF	ENST00000494055.5	3633	26	-6	39150	-6	13487	3prime_fragment	FALSE	canonical	1	229929	junction_2	31065.910112837333	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	225	1142	35.0	-51	False	NA	NA
PB.7381.28	chr20	+	3707	7	novel_in_catalog	STX16	novel	4318	9	NA	NA	8	-1019	intron_retention	FALSE	canonical	1	42049	junction_5	263488.495397016	NA	2	NA	TRUE	NA	NA	NA	C	coding	256	771	747	1517	65.0	-22	True	NA	NA
PB.10816.1	chr7	-	3192	2	full-splice_match	GPR37	ENST00000303921.2	3021	2	-182	11	-182	-11	multi-exon	FALSE	canonical	1	95702	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	603	1812	864	2675	40.0	-18	True	AATAAA	-15
PB.10816.2	chr7	-	2860	2	full-splice_match	GPR37	ENST00000303921.2	3021	2	-275	436	-275	-436	multi-exon	FALSE	canonical	1	95702	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	603	1812	957	2768	80.0	185	False	NA	NA
PB.8458.24	chr3	-	1547	13	incomplete-splice_match	HLTF	ENST00000494055.5	3633	26	21	28748	-3	-9473	3prime_fragment	FALSE	canonical	1	179363	junction_1	51190.77430410842	NA	0	NA	TRUE	NA	NA	NA	C	coding	450	1350	198	1547	65.0	-24	True	NA	NA
PB.8458.23	chr3	-	2126	18	incomplete-splice_match	HLTF	ENST00000494055.5	3633	26	20	15229	-4	4046	3prime_fragment	FALSE	canonical	1	179363	junction_6	45068.87358186042	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1926	199	2124	70.0	-25	True	ATTAAA	-15
PB.8458.22	chr3	-	2749	22	incomplete-splice_match	HLTF	ENST00000465259.5	5306	25	-32	9535	0	480	3prime_fragment	FALSE	canonical	1	82468	junction_10	55724.66403610261	NA	0	NA	TRUE	NA	NA	NA	C	coding	843	2529	219	2747	60.0	-45	True	NA	NA
PB.8458.21	chr3	-	3118	25	novel_in_catalog	HLTF	novel	5306	25	NA	NA	-1	-1344	combination_of_known_junctions	FALSE	canonical	1	41466	junction_6	67635.43155012927	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2922	196	3117	70.0	-22	True	AAGAAA	-7
PB.4348.1	chr16	-	2579	2	full-splice_match	C16orf54	ENST00000329410.3	2585	2	-2	8	-2	-8	multi-exon	FALSE	canonical	1	138873	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	A	coding	224	675	99	773	50.0	65	False	NA	NA
PB.7154.8	chr20	+	3316	7	novel_not_in_catalog	MAVS	novel	11596	6	NA	NA	14	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	150928.7412233005	NA	11	NA	TRUE	NA	NA	NA	C	coding	275	828	259	1086	35.0	20	True	AATAAA	-21
PB.7154.9	chr20	+	3980	8	novel_not_in_catalog	MAVS	novel	11596	6	NA	NA	17	-5476	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	118881.85377654126	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	112	1734	100.0	23	True	NA	NA
PB.9924.20	chr6	-	3315	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-31	-3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	337687.29984030715	NA	3	NA	TRUE	NA	NA	NA	C	coding	448	1347	40	1386	30.0	-12	True	AATAAA	-20
PB.9924.21	chr6	-	3279	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-31	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	337687.29984030715	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	40	1386	30.0	-12	True	AATAAA	-20
PB.2865.2	chr12	+	4034	28	full-splice_match	POLR3B	ENST00000228347.8	4273	28	88	151	88	-149	multi-exon	TRUE	canonical	1	58878	junction_1	18540.295454101513	NA	1	NA	TRUE	NA	NA	NA	C	coding	1133	3402	135	3536	25.0	-2	True	ATTAAA	-20
PB.9924.27	chr6	-	2841	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-32	-3	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	337687.29984030715	NA	4	1	TRUE	NA	NA	NA	C	coding	448	1347	41	1387	30.0	-13	True	AATAAA	-20
PB.9924.24	chr6	-	3011	9	novel_not_in_catalog	TAPBP	novel	3759	8	NA	NA	-32	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	337687.29984030715	NA	4	NA	TRUE	NA	NA	NA	C	coding	448	1347	41	1387	30.0	-13	True	AATAAA	-20
PB.2865.1	chr12	+	4127	28	full-splice_match	POLR3B	ENST00000228347.8	4273	28	147	-1	147	1	multi-exon	FALSE	canonical	1	58878	junction_1	18540.295454101513	NA	0	NA	TRUE	NA	NA	NA	C	coding	1133	3402	76	3477	5.0	-1	True	NA	NA
PB.7154.1	chr20	+	2945	7	full-splice_match	MAVS	ENST00000428216.3	11714	7	-9	8778	-9	-8778	multi-exon	FALSE	canonical	1	196688	junction_1	60417.587733668704	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	138	1760	25.0	-3	True	NA	NA
PB.7154.2	chr20	+	4130	8	novel_not_in_catalog	MAVS	novel	11596	6	NA	NA	-9	-5476	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	118881.85377654126	NA	3	1	TRUE	NA	NA	NA	C	coding	540	1623	138	1760	100.0	-3	True	NA	NA
PB.7154.3	chr20	+	2767	6	novel_in_catalog	MAVS	novel	11596	6	NA	NA	-9	-8783	no_combination_of_known_junctions	FALSE	canonical	1	20115	junction_3	124880.72779256213	NA	0	NA	TRUE	NA	NA	NA	C	coding	238	717	871	1587	15.0	-3	True	NA	NA
PB.7154.4	chr20	+	2898	7	full-splice_match	MAVS	ENST00000428216.3	11714	7	-3	8819	-3	-8819	multi-exon	FALSE	canonical	1	196688	junction_1	60417.587733668704	NA	0	NA	TRUE	NA	NA	NA	C	coding	540	1623	132	1754	35.0	3	True	NA	NA
PB.7154.5	chr20	+	5143	8	novel_not_in_catalog	MAVS	novel	11596	6	NA	NA	-2	-5477	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	118881.85377654126	NA	4	NA	TRUE	NA	NA	NA	C	coding	540	1623	131	1753	95.0	4	True	NA	NA
PB.7154.6	chr20	+	4236	7	full-splice_match	MAVS	ENST00000428216.3	11714	7	1	7477	1	-7477	multi-exon	FALSE	canonical	1	196688	junction_1	60417.587733668704	NA	1	NA	TRUE	NA	NA	NA	C	coding	540	1623	128	1750	80.0	7	True	NA	NA
PB.7154.7	chr20	+	3197	8	novel_not_in_catalog	MAVS	novel	11596	6	NA	NA	5	-7477	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	118881.85377654126	NA	4	NA	TRUE	NA	NA	NA	C	coding	540	1623	124	1746	80.0	11	True	NA	NA
PB.7854.3	chr22	-	2587	1	incomplete-splice_match	RTL6	ENST00000341255.3	5495	2	3127	13	3127	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	113	342	108	449	20.0	3227	False	NA	NA
PB.7854.2	chr22	-	5410	2	full-splice_match	RTL6	ENST00000341255.3	5495	2	81	4	81	-4	multi-exon	FALSE	canonical	1	105908	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	239	720	430	1149	10.0	-1	True	NA	NA
PB.2893.11	chr12	+	2199	12	novel_in_catalog	IFT81	novel	3048	12	NA	NA	-4	-393	combination_of_known_junctions	FALSE	canonical	1	3176	junction_11	53651.08146684448	NA	2	NA	TRUE	NA	NA	NA	C	coding	423	1272	117	1388	50.0	16	True	NA	NA
PB.2893.10	chr12	+	2660	19	novel_not_in_catalog	IFT81	novel	3048	12	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	31	junction_10	54944.15133583767	NA	3	1	TRUE	NA	NA	NA	C	coding	374	1125	118	1242	40.0	15	True	AATAAA	-26
PB.2893.13	chr12	+	2562	12	full-splice_match	IFT81	ENST00000361948.8	3048	12	70	416	13	-416	multi-exon	FALSE	canonical	1	3176	junction_11	53265.854647441025	NA	0	NA	TRUE	NA	NA	NA	C	coding	423	1272	503	1774	55.0	-50	False	NA	NA
PB.2893.12	chr12	+	3008	12	full-splice_match	IFT81	ENST00000361948.8	3048	12	45	-5	3	5	multi-exon	FALSE	canonical	1	3176	junction_11	53265.854647441025	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	528	1799	25.0	23	True	NA	NA
PB.2893.15	chr12	+	2647	19	full-splice_match	IFT81	ENST00000552912.5	2710	19	78	-15	21	4	multi-exon	FALSE	canonical	1	43288	junction_1	31538.30829364015	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	77	2083	15.0	-4	True	AATAAA	-31
PB.2893.14	chr12	+	2729	19	full-splice_match	IFT81	ENST00000242591.9	3108	19	366	13	351	-2	multi-exon	FALSE	canonical	1	46078	junction_1	31050.73585677019	NA	0	NA	TRUE	NA	NA	NA	C	coding	668	2007	165	2171	40.0	288	False	AATAAA	-25
PB.2893.17	chr12	+	1719	9	novel_not_in_catalog	IFT81	novel	2710	19	NA	NA	684	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	52420.53193644643	NA	2	NA	TRUE	NA	NA	NA	C	coding	228	687	475	1161	40.0	NA	False	AATAAA	-25
PB.2893.16	chr12	+	1658	9	novel_in_catalog	IFT81	novel	2710	19	NA	NA	-64	-1	combination_of_known_junctions	FALSE	canonical	1	2336	junction_1	51677.38124653764	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	413	1099	40.0	NA	False	AATAAA	-26
PB.3339.5	chr14	+	2662	15	full-splice_match	DCAF11	ENST00000326009.9	2570	15	-92	0	-3	0	multi-exon	FALSE	canonical	1	55649	junction_2	216786.56073197894	NA	1	1	TRUE	NA	NA	NA	C	coding	502	1509	434	1942	5.0	-76	True	AATAAA	-16
PB.2893.18	chr12	+	1618	9	novel_not_in_catalog	IFT81	novel	2710	19	NA	NA	921	-1	any annotated donor/acceptor	FALSE	canonical	1	539	junction_1	52248.98438112817	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	373	1059	40.0	NA	False	AATAAA	-26
PB.3339.7	chr14	+	3410	15	full-splice_match	DCAF11	ENST00000559115.5	2711	15	151	-850	1	-361	multi-exon	FALSE	canonical	1	97131	junction_1	188593.1289582558	NA	1	1	TRUE	NA	NA	NA	C	coding	546	1641	200	1840	70.0	-34	True	NA	NA
PB.3339.6	chr14	+	2592	15	novel_in_catalog	DCAF11	novel	849	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	5562	junction_1	208518.9679581002	NA	2	NA	TRUE	NA	NA	NA	C	coding	546	1641	231	1871	5.0	-37	True	AATAAA	-17
PB.3339.1	chr14	+	3738	15	novel_not_in_catalog	DCAF11	novel	849	7	NA	NA	8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	209753.7221009658	NA	6	2	TRUE	NA	NA	NA	C	coding	546	1641	166	1806	5.0	-63	True	NA	NA
PB.3339.3	chr14	+	2490	15	novel_in_catalog	DCAF11	novel	849	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	29768	junction_2	241406.50868418344	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1563	207	1769	5.0	-41	True	AATAAA	-17
PB.3339.2	chr14	+	3044	15	novel_in_catalog	DCAF11	novel	849	7	NA	NA	-6	1	intron_retention	FALSE	canonical	1	14118	junction_2	224956.96541172048	NA	1	1	TRUE	NA	NA	NA	C	coding	359	1080	1243	2322	5.0	-41	True	AATAAA	-18
PB.2534.1	chr12	+	6274	6	full-splice_match	KIAA1551	ENST00000312561.8	6230	6	-54	10	-5	-6	multi-exon	FALSE	canonical	1	206665	junction_2	96465.35806516244	NA	0	NA	TRUE	NA	NA	NA	C	coding	1747	5244	469	5712	55.0	-3138	False	AATAAA	-13
PB.8397.27	chr3	+	3640	29	novel_in_catalog	ATP2C1	novel	4888	27	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	56424	junction_1	255509.35765110562	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	330	3179	25.0	-16	True	ATTAAA	-30
PB.2685.8	chr12	-	8614	29	full-splice_match	BAZ2A	ENST00000549884.5	6050	29	-126	-2438	-29	-1	multi-exon	FALSE	canonical	1	110836	junction_28	110159.5880569297	NA	12	NA	TRUE	NA	NA	NA	C	coding	1903	5712	216	5927	35.0	-12	True	AATAAA	-21
PB.2268.6	chr11	+	8873	6	novel_not_in_catalog	ZC3H12C	novel	8807	6	NA	NA	-5032	-133	any annotated donor/acceptor	FALSE	canonical	1	7358	junction_1	31665.211456107478	NA	3	NA	TRUE	NA	NA	NA	B	coding	852	2559	346	2904	15.0	11	True	AATAAA	-21
PB.2534.5	chr12	+	4291	3	full-splice_match	KIAA1551	ENST00000540924.5	362	3	42	-3971	1	2052	multi-exon	FALSE	canonical	1	34400	junction_2	115826.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1358	4074	216	4289	65.0	1	True	AATAAA	-45
PB.2534.4	chr12	+	4317	4	incomplete-splice_match	KIAA1551	ENST00000312561.8	6230	6	-27	8276	-16	1852	3prime_fragment	FALSE	canonical	1	206665	junction_2	29064.48707042095	NA	5	NA	TRUE	NA	NA	NA	C	coding	1292	3876	442	4317	60.0	-3111	False	GATAAA	-22
PB.2534.7	chr12	+	6473	6	novel_in_catalog	KIAA1551	novel	674	3	NA	NA	-88	-6	combination_of_known_junctions	FALSE	canonical	1	17446	junction_1	154860.17069679344	NA	2	NA	TRUE	NA	NA	NA	C	coding	1747	5244	668	5911	55.0	0	True	AATAAA	-13
PB.2534.6	chr12	+	7505	5	novel_in_catalog	KIAA1551	novel	674	3	NA	NA	-4	-6	intron_retention	FALSE	canonical	1	206665	junction_2	106854.17188246558	NA	0	NA	TRUE	NA	NA	NA	C	coding	1670	5013	419	5431	55.0	0	True	AATAAA	-13
PB.2534.9	chr12	+	2360	4	novel_in_catalog	KIAA1551	novel	674	3	NA	NA	-60	-303	combination_of_known_junctions	FALSE	canonical	1	17446	junction_1	107407.65585479567	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1719	640	2358	65.0	2	True	AATATA	-2
PB.2534.8	chr12	+	4508	4	novel_in_catalog	KIAA1551	novel	674	3	NA	NA	-61	1844	combination_of_known_junctions	FALSE	canonical	1	17446	junction_1	107407.65585479567	NA	1	NA	TRUE	NA	NA	NA	C	coding	1289	3867	641	4507	80.0	1	True	GATAAA	-14
PB.6468.12	chr2	-	1960	3	novel_not_in_catalog	RTN4	novel	4061	9	NA	NA	13439	1447	any annotated donor/acceptor	FALSE	canonical	1	14	junction_2	63662.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1788	171	1958	65.0	-5243	False	AAGAAA	-32
PB.10450.2	chr7	+	2589	7	full-splice_match	SNX10	ENST00000446848.6	2613	7	24	0	-2	0	multi-exon	FALSE	canonical	1	6466	junction_1	130142.90102133885	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	239	844	50.0	-1116	False	ATTAAA	-5
PB.2685.7	chr12	-	8592	29	full-splice_match	BAZ2A	ENST00000551812.5	8600	29	7	1	-6	-1	multi-exon	FALSE	canonical	1	33743	junction_28	118673.4201864458	NA	8	NA	TRUE	NA	NA	NA	C	coding	1905	5718	188	5905	35.0	-25	True	AATAAA	-21
PB.3191.19	chr13	-	2954	21	full-splice_match	DIS3	ENST00000377780.8	5232	21	-7	2285	1	-53	multi-exon	FALSE	canonical	1	77521	junction_19	121249.42400047721	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	101	2887	30.0	173	False	AAGAAA	-20
PB.3191.18	chr13	-	3205	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	33	7366	25	140	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	69	2945	35.0	-1	True	AATACA	-20
PB.3191.11	chr13	-	3713	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	17	6874	9	1	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	1	NA	TRUE	NA	NA	NA	C	coding	958	2877	85	2961	30.0	-17	True	AATAAA	-25
PB.3191.10	chr13	-	3808	21	novel_not_in_catalog	DIS3	novel	10604	21	NA	NA	26	86	intron_retention	FALSE	canonical	1	104	junction_20	114861.24479218393	NA	20	1	TRUE	NA	NA	NA	C	coding	967	2904	68	2971	30.0	0	True	ATTAAA	-16
PB.5827.3	chr19	+	2559	3	novel_in_catalog	RPL18A	novel	665	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	6489	junction_1	558.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	2114	2506	5.0	11	False	AATAAA	-19
PB.3191.12	chr13	-	3615	21	full-splice_match	DIS3	ENST00000377780.8	5232	21	16	1601	16	0	multi-exon	FALSE	canonical	1	77521	junction_19	121249.42400047721	NA	3	NA	TRUE	NA	NA	NA	C	coding	928	2787	78	2864	35.0	-10	True	AATAAA	-24
PB.3191.14	chr13	-	3554	20	novel_in_catalog	DIS3	novel	10604	21	NA	NA	9	0	intron_retention	FALSE	canonical	1	7933	junction_19	115580.52691493285	NA	120	14	TRUE	NA	NA	NA	C	coding	835	2508	296	2803	35.0	-17	True	AATAAA	-24
PB.3191.17	chr13	-	3591	21	full-splice_match	DIS3	ENST00000377780.8	5232	21	9	1632	9	-31	multi-exon	FALSE	canonical	1	77521	junction_19	121249.42400047721	NA	0	NA	TRUE	NA	NA	NA	C	coding	928	2787	85	2871	70.0	-17	True	NA	NA
PB.3191.16	chr13	-	3709	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	-11	6906	-11	-31	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	1	NA	TRUE	NA	NA	NA	C	coding	958	2877	113	2989	70.0	-1	True	NA	NA
PB.2858.1	chr12	-	2433	2	full-splice_match	AC016257.1	ENST00000550088.1	641	2	-455	-1337	-455	1337	multi-exon	FALSE	canonical	1	1349	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	572	False	AATAAA	-27
PB.11370.1	chr8	-	1906	14	full-splice_match	TOP1MT	ENST00000329245.8	1958	14	16	36	-14	0	multi-exon	TRUE	canonical	1	165461	junction_13	86848.66130188188	NA	1	NA	TRUE	NA	NA	NA	C	coding	601	1806	20	1825	30.0	-1	True	ATTAAA	-26
PB.9218.6	chr5	+	4058	1	novel_in_catalog	MRPS30	novel	1678	5	NA	NA	30	-617	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	267	804	9	812	65.0	6	True	NA	NA
PB.6339.1	chr2	+	2713	1	full-splice_match	RHOB	ENST00000272233.5	2372	1	-17	-324	-17	324	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	196	591	410	1000	20.0	-3985	False	AAAACA	-12
PB.501.3	chr1	-	2886	6	full-splice_match	CTBS	ENST00000477677.5	2892	6	3	3	3	-3	multi-exon	FALSE	canonical	1	96282	junction_4	76378.52340913643	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	472	1011	35.0	-38	True	AATAAA	-20
PB.520.1	chr1	-	3781	7	full-splice_match	GTF2B	ENST00000370500.9	1351	7	51	-2481	22	2481	multi-exon	FALSE	canonical	1	357169	junction_2	88526.11543760532	NA	1	NA	TRUE	NA	NA	NA	C	coding	316	951	69	1019	30.0	-1	True	AATAAA	-22
PB.6569.2	chr2	+	2923	13	full-splice_match	TTC31	ENST00000233623.9	3235	13	-17	329	-1	-2	multi-exon	FALSE	canonical	1	86690	junction_8	50254.825415631036	NA	2	1	TRUE	NA	NA	NA	C	coding	519	1560	25	1584	30.0	-15	True	NA	NA
PB.9553.9	chr5	-	3929	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	158	-1528	3	1528	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	431	1444	75.0	113	False	NA	NA
PB.9553.8	chr5	-	4255	11	novel_not_in_catalog	CSNK1A1	novel	6067	10	NA	NA	6	1760	any annotated donor/acceptor	FALSE	canonical	1	2093	junction_9	565223.9232910794	NA	4	1	TRUE	NA	NA	NA	C	coding	228	687	852	1538	75.0	116	False	NA	NA
PB.8859.2	chr4	-	1754	12	full-splice_match	HPSE	ENST00000311412.9	4615	12	-1	2862	-1	-3	multi-exon	FALSE	canonical	1	52402	junction_9	9783.290081047242	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	102	1733	35.0	-6	False	AATAAA	-15
PB.9553.5	chr5	-	4556	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	116	-2113	-39	-1586	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	473	1486	15.0	-1	True	AGTAAA	-20
PB.9553.7	chr5	-	4271	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-116	1912	39	1787	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	550	1527	45.0	-6	False	AATAAA	-22
PB.9553.6	chr5	-	4171	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	112	-1724	-43	1724	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	477	1490	40.0	-5	True	CATAAA	-13
PB.9553.1	chr5	-	4879	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	1	1187	1	-1187	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	433	1410	100.0	111	False	NA	NA
PB.9553.3	chr5	-	5039	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	26	-2506	26	-1193	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	4	NA	TRUE	NA	NA	NA	C	coding	337	1014	563	1576	85.0	-19	False	NA	NA
PB.9553.2	chr5	-	4091	11	novel_not_in_catalog	CSNK1A1	novel	6067	10	NA	NA	-27	-1187	any annotated donor/acceptor	FALSE	canonical	1	41299	junction_1	500399.2033886145	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	461	1474	100.0	11	True	NA	NA
PB.9218.1	chr5	+	5611	6	novel_not_in_catalog	MRPS30	novel	1678	5	NA	NA	12	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	322649.7733701978	NA	1	NA	TRUE	NA	NA	NA	C	coding	439	1320	27	1346	20.0	-12	True	NA	NA
PB.1062.1	chr1	+	2955	4	full-splice_match	MFSD4A	ENST00000465651.1	588	4	0	-2367	0	-1	multi-exon	FALSE	canonical	1	85680	junction_2	2980.2149064939745	NA	3	NA	TRUE	NA	NA	NA	A	coding	97	294	55	348	30.0	-29	True	AATAAA	-13
PB.9825.7	chr6	-	3029	5	novel_in_catalog	ZSCAN12	novel	5495	5	NA	NA	-8	-8	no_combination_of_known_junctions	FALSE	canonical	1	2467	junction_2	22352.299171449904	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	155	733	25.0	-2	True	AATAAA	-13
PB.9825.6	chr6	-	4194	6	full-splice_match	ZSCAN12	ENST00000396827.3	3909	6	-29	-256	-26	-8	multi-exon	FALSE	canonical	1	14249	junction_2	18138.664592521687	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	173	1987	25.0	12	False	AATAAA	-13
PB.3325.4	chr14	-	1935	2	full-splice_match	HOMEZ	ENST00000357460.6	4971	2	-15	3051	-15	273	multi-exon	FALSE	canonical	1	56364	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	181	1833	30.0	-1	True	AAGAAA	-32
PB.9825.4	chr6	-	2555	3	novel_not_in_catalog	ZSCAN12	novel	5495	5	NA	NA	16379	130	any annotated donor/acceptor	FALSE	canonical	1	9512	junction_2	19514.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-15	False	NA	NA
PB.3325.2	chr14	-	4971	2	full-splice_match	HOMEZ	ENST00000357460.6	4971	2	-38	38	-38	-38	multi-exon	FALSE	canonical	1	56364	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	550	1653	204	1856	5.0	7420	False	TTTAAA	-11
PB.3325.3	chr14	-	3391	2	full-splice_match	HOMEZ	ENST00000357460.6	4971	2	-38	1618	-38	16	multi-exon	FALSE	canonical	1	56364	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	550	1653	204	1856	15.0	7420	False	AATAAA	-33
PB.9825.1	chr6	-	4506	6	novel_not_in_catalog	ZSCAN12	novel	5495	5	NA	NA	-19	133	any annotated donor/acceptor	FALSE	canonical	1	4650	junction_2	21798.52082504682	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	166	2001	25.0	-13	True	NA	NA
PB.3325.1	chr14	-	5542	2	full-splice_match	HOMEZ	ENST00000357460.6	4971	2	15	-586	15	586	multi-exon	FALSE	canonical	1	56364	junction_1	0.0	NA	36	NA	TRUE	NA	NA	NA	C	coding	550	1653	151	1803	25.0	29	True	NA	NA
PB.2506.2	chr12	+	4123	8	full-splice_match	ETNK1	ENST00000266517.8	7159	8	96	2940	-21	2502	multi-exon	FALSE	canonical	1	225243	junction_4	59145.598111088264	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	261	1352	70.0	0	True	NA	NA
PB.2506.3	chr12	+	3173	8	full-splice_match	ETNK1	ENST00000266517.8	7159	8	92	3894	-25	1548	multi-exon	FALSE	canonical	1	225243	junction_4	59145.598111088264	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	265	1356	30.0	-4	True	ATTAAA	-36
PB.8824.3	chr4	-	4189	9	full-splice_match	RCHY1	ENST00000504085.5	1123	9	117	-3183	0	-122	multi-exon	FALSE	canonical	1	4843	junction_2	154170.27608783738	NA	1	NA	TRUE	NA	NA	NA	C	coding	107	324	1	324	40.0	6	True	NA	NA
PB.2506.1	chr12	+	7087	8	full-splice_match	ETNK1	ENST00000266517.8	7159	8	75	-3	9	3	multi-exon	TRUE	canonical	1	225243	junction_4	59145.598111088264	NA	3	NA	TRUE	NA	NA	NA	C	coding	452	1359	15	1373	30.0	-21	True	AATAAA	-40
PB.2506.6	chr12	+	3788	1	novel_in_catalog	ETNK1	novel	7159	8	NA	NA	-5067	8578	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	3608	False	NA	NA
PB.8824.4	chr4	-	4244	8	full-splice_match	RCHY1	ENST00000513257.5	759	8	-128	-3357	4	-144	multi-exon	FALSE	canonical	1	15223	junction_2	119257.45850752259	NA	3	NA	TRUE	NA	NA	NA	C	coding	252	759	129	887	40.0	-12	True	NA	NA
PB.2506.4	chr12	+	1668	8	full-splice_match	ETNK1	ENST00000266517.8	7159	8	97	5394	-20	48	multi-exon	FALSE	canonical	1	225243	junction_4	59145.598111088264	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	260	1351	10.0	1	True	TATAAA	-18
PB.2506.5	chr12	+	2089	8	full-splice_match	ETNK1	ENST00000266517.8	7159	8	113	4957	-4	485	multi-exon	FALSE	canonical	1	225243	junction_4	59145.598111088264	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	244	1335	30.0	-9	True	ATTAAA	-17
PB.6535.22	chr2	-	1958	13	full-splice_match	TIA1	ENST00000433529.6	4647	13	17	2672	-2	201	multi-exon	FALSE	canonical	1	291783	junction_8	141853.3172032871	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	195	1355	60.0	-10	True	ATTAAA	-8
PB.8022.1	chr3	+	4880	1	incomplete-splice_match	ACVR2B	ENST00000352511.4	11821	11	34389	23	14794	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-8237	False	NA	NA
PB.501.1	chr1	-	3081	7	full-splice_match	CTBS	ENST00000370630.5	6600	7	2	3517	2	-2	multi-exon	FALSE	canonical	1	190444	junction_6	46708.689479462904	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	48	1205	35.0	-23	True	AATAAA	-21
PB.6256.4	chr19	+	1690	3	novel_in_catalog	AC003006.1	novel	421	2	NA	NA	64770	4582	no_combination_of_known_junctions	FALSE	canonical	1	23672	junction_2	38188.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	0	True	NA	NA
PB.6256.5	chr19	+	3765	4	novel_not_in_catalog	AC003006.1	novel	421	2	NA	NA	64789	4571	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	53523.84579065878	NA	3	1	TRUE	NA	NA	NA	B	coding	518	1557	226	1782	30.0	-7	False	NA	NA
PB.5993.1	chr19	+	3882	8	novel_in_catalog	TIMM50	novel	1612	11	NA	NA	-7	-7	intron_retention	FALSE	canonical	1	511186	junction_1	263957.2725650877	NA	5	NA	TRUE	NA	NA	NA	C	coding	248	747	3035	3781	20.0	-46	False	AATAAA	-17
PB.5993.3	chr19	+	1361	11	full-splice_match	TIMM50	ENST00000607714.5	1338	11	-5	-18	-5	18	multi-exon	FALSE	canonical	1	511186	junction_1	314207.8933601128	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	28	1089	5.0	-44	False	NA	NA
PB.5993.2	chr19	+	1193	11	full-splice_match	TIMM50	ENST00000607714.5	1338	11	-6	151	-6	-5	multi-exon	FALSE	canonical	1	511186	junction_1	314207.8933601128	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	29	1090	15.0	-45	False	AATAAA	-19
PB.5644.2	chr19	-	3679	18	full-splice_match	RFX2	ENST00000303657.9	3993	18	-41	355	26	-2	multi-exon	FALSE	canonical	1	31454	junction_13	12529.692779505367	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	192	2363	30.0	-8	True	NA	NA
PB.5993.4	chr19	+	1730	12	novel_not_in_catalog	TIMM50	novel	1612	11	NA	NA	-3	-170	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	433109.3342859321	NA	2	1	TRUE	NA	NA	NA	C	coding	353	1062	17	1078	45.0	-11	True	NA	NA
PB.5993.7	chr19	+	3746	9	novel_in_catalog	TIMM50	novel	1612	11	NA	NA	-8	-9	intron_retention	FALSE	canonical	1	511186	junction_1	291979.14971952623	NA	7	1	TRUE	NA	NA	NA	C	coding	229	690	2958	3647	15.0	3	True	AATAAA	-15
PB.5644.1	chr19	-	4010	18	full-splice_match	RFX2	ENST00000303657.9	3993	18	-18	1	-18	-1	multi-exon	FALSE	canonical	1	31454	junction_13	12529.692779505367	NA	0	NA	TRUE	NA	NA	NA	C	coding	723	2172	169	2340	5.0	15	True	AATACA	-17
PB.3674.1	chr14	-	2467	6	full-splice_match	CINP	ENST00000559514.5	4270	6	26	1777	2	-260	multi-exon	FALSE	canonical	1	40354	junction_1	214866.05340686088	NA	2	NA	TRUE	NA	NA	NA	C	coding	212	639	40	678	85.0	-1	True	NA	NA
PB.3674.3	chr14	-	2819	6	novel_not_in_catalog	CINP	novel	4270	6	NA	NA	-9	1948	intron_retention	FALSE	canonical	1	17	junction_1	228455.64333323002	NA	3	NA	TRUE	NA	NA	NA	C	coding	212	639	29	667	45.0	10	True	ATTAAA	-32
PB.3674.2	chr14	-	2319	6	full-splice_match	CINP	ENST00000559514.5	4270	6	27	1924	3	-407	multi-exon	FALSE	canonical	1	40354	junction_1	214866.05340686088	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	39	677	90.0	0	True	NA	NA
PB.3674.4	chr14	-	2113	5	full-splice_match	CINP	ENST00000216756.10	955	5	-18	-1140	4	-105	multi-exon	FALSE	canonical	1	259090	junction_4	133509.1023432485	NA	1	NA	TRUE	NA	NA	NA	C	coding	212	639	60	698	30.0	-21	False	AATAAA	-26
PB.10084.1	chr6	+	3193	1	genic	RWDD2A	novel	NA	NA	NA	NA	-30	-2391	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	217	654	2271	2924	30.0	-8	True	AATAAA	-19
PB.10084.3	chr6	+	2289	3	full-splice_match	RWDD2A	ENST00000369724.4	3744	3	-21	1476	-21	-1476	multi-exon	FALSE	canonical	1	79015	junction_1	2806.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	227	1105	15.0	1	True	ATTAAA	-15
PB.10084.2	chr6	+	3771	3	full-splice_match	RWDD2A	ENST00000369724.4	3744	3	-29	2	-29	-2	multi-exon	FALSE	canonical	1	79015	junction_1	2806.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	292	879	235	1113	15.0	-7	True	AGTAAA	-15
PB.10084.5	chr6	+	2229	2	novel_in_catalog	RWDD2A	novel	3744	3	NA	NA	-15	-2398	intron_retention	FALSE	canonical	1	84627	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	1089	1967	25.0	7	True	AATAAA	-12
PB.10084.4	chr6	+	2310	2	incomplete-splice_match	RWDD2A	ENST00000369724.4	3744	3	-20	2396	-20	-2396	intron_retention	FALSE	canonical	1	79015	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	217	654	1393	2046	25.0	2	True	AATAAA	-14
PB.11824.1	chr9	+	2491	16	full-splice_match	GLE1	ENST00000309971.8	3321	16	-7	837	-7	-837	multi-exon	FALSE	canonical	1	173513	junction_1	72400.70823306144	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	114	2210	5.0	-26	True	GATAAA	-17
PB.6944.8	chr2	+	3317	1	novel_in_catalog	CASP8	novel	1630	9	NA	NA	616	-5487	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	616	False	AAAACA	-24
PB.6944.9	chr2	+	2727	9	novel_in_catalog	CASP8	novel	1630	9	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	21636	junction_1	93174.94755129996	NA	5	NA	TRUE	NA	NA	NA	C	coding	479	1440	173	1612	10.0	-2554	False	AATAAA	-17
PB.10625.1	chr7	+	2170	4	full-splice_match	SRRM3	ENST00000612155.1	2150	4	-22	2	-22	0	multi-exon	TRUE	canonical	0	0	junction_3	19020.246656888783	NA	0	NA	TRUE	NA	NA	NA	A	coding	104	315	397	711	25.0	-38	True	AATAAA	-16
PB.6944.4	chr2	+	2838	10	novel_in_catalog	CASP8	novel	1630	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	51233	junction_2	98601.17305815608	NA	2	NA	TRUE	NA	NA	NA	C	coding	479	1440	282	1721	10.0	2	True	AATAAA	-19
PB.6944.5	chr2	+	2789	9	novel_in_catalog	CASP8	novel	1630	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	51233	junction_2	114381.80629031164	NA	0	NA	TRUE	NA	NA	NA	C	coding	464	1395	281	1675	15.0	3	True	AATAAA	-16
PB.6944.6	chr2	+	2720	9	full-splice_match	CASP8	ENST00000392263.6	1630	9	24	-1114	1	-1	multi-exon	FALSE	canonical	1	32321	junction_1	118192.40773251628	NA	3	NA	TRUE	NA	NA	NA	C	coding	464	1395	212	1606	15.0	4	True	AATAAA	-16
PB.6944.7	chr2	+	2743	9	novel_in_catalog	CASP8	novel	1630	9	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	13060	junction_2	121179.62156649938	NA	2	NA	TRUE	NA	NA	NA	C	coding	464	1395	236	1630	15.0	-21	True	AATAAA	-15
PB.10287.1	chr6	-	4550	22	incomplete-splice_match	SYNE1	ENST00000409694.6	10634	59	102959	-87	10177	-6	5prime_fragment	FALSE	canonical	1	84647	junction_9	55929.39892221669	NA	2	NA	TRUE	NA	NA	NA	B	coding	1227	3684	124	3807	25.0	NA	False	NA	NA
PB.6944.2	chr2	+	2015	3	full-splice_match	CASP8	ENST00000490682.5	2911	3	-3	899	-1	-899	multi-exon	FALSE	canonical	1	40329	junction_2	7262.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-1	True	NA	NA
PB.6944.3	chr2	+	3484	2	novel_not_in_catalog	CASP8	novel	1630	9	NA	NA	0	-5487	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	2	True	AAAACA	-24
PB.3318.2	chr14	-	1785	10	novel_in_catalog	HAUS4	novel	1447	9	NA	NA	6	0	intron_retention	FALSE	canonical	1	69464	junction_9	202066.06782589026	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	398	1489	20.0	1	True	AATAAA	-19
PB.3318.3	chr14	-	1633	10	full-splice_match	HAUS4	ENST00000541587.5	1637	10	4	0	-1	0	multi-exon	FALSE	canonical	1	191940	junction_9	173864.44893637867	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	246	1337	20.0	-1	True	AATAAA	-19
PB.3318.1	chr14	-	1450	9	full-splice_match	HAUS4	ENST00000555367.5	1454	9	36	-32	1	0	multi-exon	FALSE	canonical	1	54078	junction_5	238218.90755481474	NA	23	3	TRUE	NA	NA	NA	C	coding	318	957	198	1154	20.0	-1	True	AATAAA	-19
PB.8002.8	chr3	+	6560	7	full-splice_match	CRTAP	ENST00000320954.10	6630	7	68	2	-7	-2	multi-exon	FALSE	canonical	1	1163724	junction_1	142986.39801587968	NA	2	NA	TRUE	NA	NA	NA	C	coding	401	1206	32	1237	15.0	-15	True	ATTAAA	-15
PB.11426.3	chr9	+	3941	26	incomplete-splice_match	SMARCA2	ENST00000382203.5	5867	34	39015	52	2799	1	5prime_fragment	FALSE	canonical	1	84470	junction_21	169049.43433614203	NA	0	NA	TRUE	NA	NA	NA	C	coding	1001	3006	103	3108	20.0	NA	False	AATAAA	-16
PB.9470.5	chr5	-	4773	23	novel_in_catalog	FAM13B	novel	5465	23	NA	NA	-7	-628	combination_of_known_junctions	FALSE	canonical	1	39840	junction_10	87996.88905357642	NA	5	NA	TRUE	NA	NA	NA	C	coding	819	2460	677	3136	0.0	5557	False	AATAAA	-19
PB.9470.4	chr5	-	4912	23	full-splice_match	FAM13B	ENST00000033079.7	5465	23	-73	626	-18	-626	multi-exon	FALSE	canonical	1	85055	junction_21	69305.80461403177	NA	1	NA	TRUE	NA	NA	NA	C	coding	915	2748	526	3273	0.0	-1	True	AATAAA	-21
PB.9470.7	chr5	-	2986	21	incomplete-splice_match	FAM13B	ENST00000033079.7	5465	23	-73	4976	-18	259	3prime_fragment	FALSE	canonical	1	85055	junction_19	69990.02198519086	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2460	526	2985	65.0	-1	True	NA	NA
PB.9470.6	chr5	-	4594	22	novel_in_catalog	FAM13B	novel	5465	23	NA	NA	6	-727	combination_of_known_junctions	FALSE	canonical	1	42587	junction_20	74796.09896020246	NA	1	NA	TRUE	NA	NA	NA	C	coding	797	2394	663	3056	15.0	-1	True	AATAAA	-24
PB.9470.3	chr5	-	5545	23	full-splice_match	FAM13B	ENST00000033079.7	5465	23	-82	2	-27	-2	multi-exon	FALSE	canonical	1	85055	junction_21	69305.80461403177	NA	0	NA	TRUE	NA	NA	NA	C	coding	915	2748	535	3282	35.0	-10	True	AATAAA	-17
PB.11824.2	chr9	+	3354	17	novel_in_catalog	GLE1	novel	3321	16	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	1	7017	junction_9	131285.50730027226	NA	1	NA	TRUE	NA	NA	NA	C	coding	707	2124	110	2233	25.0	-22	True	AATAAA	-22
PB.8805.20	chr4	-	4755	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	15	4794	-11	1409	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	2	1	TRUE	NA	NA	NA	C	coding	1052	3159	46	3204	60.0	-17	True	AAGAAA	-15
PB.8805.23	chr4	-	4337	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	16	5211	-10	992	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	45	3203	50.0	-16	True	ATTAAA	-29
PB.8805.22	chr4	-	4515	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	11	5038	11	1165	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	1	NA	TRUE	NA	NA	NA	C	coding	1052	3159	50	3208	35.0	-21	True	AATAAA	-17
PB.8805.25	chr4	-	3475	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	31	6058	0	145	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	0	NA	TRUE	NA	NA	NA	C	coding	1052	3159	30	3188	70.0	-1	True	NA	NA
PB.8805.24	chr4	-	4181	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	34	5349	-3	854	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	2	NA	TRUE	NA	NA	NA	C	coding	1052	3159	27	3185	50.0	2	True	NA	NA
PB.8805.27	chr4	-	2511	28	incomplete-splice_match	UBA6	ENST00000322244.9	9564	33	28	13747	2	4055	3prime_fragment	FALSE	canonical	1	181998	junction_27	51815.220790006744	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2478	33	2510	45.0	-4	True	NA	NA
PB.8805.26	chr4	-	3412	32	novel_in_catalog	UBA6	novel	9564	33	NA	NA	0	145	no_combination_of_known_junctions	FALSE	canonical	1	4302	junction_31	74696.19653379967	NA	1	NA	TRUE	NA	NA	NA	C	coding	1031	3096	30	3125	70.0	-1	True	NA	NA
PB.8805.29	chr4	-	2412	11	full-splice_match	UBA6	ENST00000429659.7	2387	11	-25	0	6	0	multi-exon	FALSE	canonical	1	181998	junction_10	54762.7581788938	NA	0	NA	TRUE	NA	NA	NA	C	coding	340	1023	55	1077	95.0	-26	True	NA	NA
PB.8805.28	chr4	-	3625	10	novel_in_catalog	UBA6	novel	9564	33	NA	NA	-3	0	intron_retention	FALSE	canonical	1	181998	junction_9	53435.65066923434	NA	2	NA	TRUE	NA	NA	NA	C	coding	306	921	27	947	95.0	2	True	NA	NA
PB.11121.3	chr8	+	4100	18	full-splice_match	HGSNAT	ENST00000379644.8	5236	18	104	1032	55	-1032	multi-exon	FALSE	canonical	1	77951	junction_1	56541.78816099564	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	89	1846	40.0	62	False	NA	NA
PB.538.2	chr1	-	4860	7	full-splice_match	GFI1	ENST00000370332.5	2855	7	-2008	3	109	-1	multi-exon	FALSE	canonical	1	19700	junction_6	29093.368811561777	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	2328	3596	20.0	962	False	AATAAA	-12
PB.538.1	chr1	-	2721	7	full-splice_match	GFI1	ENST00000427103.5	2693	7	-29	1	-29	-1	multi-exon	TRUE	canonical	1	19954	junction_6	29014.198545712065	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	187	1455	20.0	-6	True	AATAAA	-14
PB.10778.3	chr7	-	4409	23	novel_not_in_catalog	COG5	novel	4532	21	NA	NA	15	-183	any annotated donor/acceptor	FALSE	canonical	1	2838	junction_16	103409.745411675	NA	2	NA	TRUE	NA	NA	NA	C	coding	544	1635	997	2631	15.0	0	True	AATAAA	-21
PB.8823.1	chr4	+	2356	4	full-splice_match	PARM1	ENST00000307428.7	5011	4	0	2655	0	-2655	multi-exon	FALSE	canonical	1	216896	junction_2	9300.593672807488	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	213	1145	25.0	0	True	AATAAA	-8
PB.10778.2	chr7	-	4464	22	full-splice_match	COG5	ENST00000297135.7	4060	22	603	-1007	23	-2	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	1	NA	TRUE	NA	NA	NA	C	coding	829	2490	16	2505	30.0	8	True	ATTAAA	-15
PB.6569.5	chr2	+	3155	11	novel_in_catalog	TTC31	novel	4025	7	NA	NA	0	-2	intron_retention	FALSE	canonical	1	80883	junction_8	53355.87860404887	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	15	1031	30.0	-5	True	NA	NA
PB.8823.6	chr4	+	3015	4	full-splice_match	PARM1	ENST00000307428.7	5011	4	-61	2057	-40	-2057	multi-exon	FALSE	canonical	1	216896	junction_2	9300.593672807488	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	274	1206	15.0	-1971	False	CATAAA	-35
PB.10778.1	chr7	-	4655	22	full-splice_match	COG5	ENST00000297135.7	4060	22	595	-1190	15	181	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	24	2513	45.0	0	True	AATAAA	-28
PB.8823.4	chr4	+	4588	4	novel_not_in_catalog	PARM1	novel	4308	3	NA	NA	-45	0	any annotated donor/acceptor	FALSE	canonical	1	580	junction_2	107642.54339040654	NA	3	NA	TRUE	NA	NA	NA	C	coding	147	444	279	722	10.0	-1976	False	ATTAAA	-16
PB.3646.2	chr14	+	1796	2	incomplete-splice_match	DICER1-AS1	ENST00000554631.2	1709	3	30	0	-3	0	intron_retention	FALSE	canonical	1	56837	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-12	True	AATAAA	-23
PB.3646.3	chr14	+	5654	1	novel_in_catalog	DICER1-AS1	novel	1709	3	NA	NA	8	-16586	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.3646.1	chr14	+	1674	3	novel_in_catalog	DICER1-AS1	novel	1709	3	NA	NA	-11	0	intron_retention	FALSE	canonical	1	8511	junction_2	4045.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-20	True	AATAAA	-15
PB.6646.1	chr2	+	3361	25	full-splice_match	INPP4A	ENST00000409851.7	3365	25	1	3	1	-3	multi-exon	FALSE	canonical	1	62349	junction_1	41738.180931664654	NA	7	1	TRUE	NA	NA	NA	C	coding	972	2919	393	3311	30.0	1	True	AATAAA	-14
PB.6646.3	chr2	+	6498	25	full-splice_match	INPP4A	ENST00000409851.7	3365	25	-11	-3122	-7	-250	multi-exon	FALSE	canonical	1	62349	junction_1	41738.180931664654	NA	1	NA	TRUE	NA	NA	NA	C	coding	972	2919	405	3323	20.0	-11	True	ATTAAA	-17
PB.10778.6	chr7	-	3591	23	novel_not_in_catalog	COG5	novel	4532	21	NA	NA	28	21	any annotated donor/acceptor	FALSE	canonical	1	2838	junction_16	103409.745411675	NA	2	NA	TRUE	NA	NA	NA	C	coding	544	1635	984	2618	40.0	13	True	AATAAA	-30
PB.10778.5	chr7	-	3414	21	full-splice_match	COG5	ENST00000347053.7	4532	21	131	987	25	22	multi-exon	FALSE	canonical	1	4360	junction_6	90623.98612624586	NA	1	NA	TRUE	NA	NA	NA	C	coding	808	2427	14	2440	40.0	10	True	AATAAA	-31
PB.6569.4	chr2	+	3042	12	full-splice_match	TTC31	ENST00000464241.5	1562	12	-6	-1474	-1	-2	multi-exon	FALSE	canonical	1	6576	junction_8	66202.82546066449	NA	24	1	TRUE	NA	NA	NA	C	coding	358	1077	16	1092	30.0	-6	True	NA	NA
PB.11246.6	chr8	-	5641	5	full-splice_match	TP53INP1	ENST00000448464.6	5631	5	-11	1	-11	-1	multi-exon	FALSE	canonical	1	106496	junction_4	58283.94635532155	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	375	869	25.0	-12	True	AATAAA	-16
PB.11246.4	chr8	-	5725	6	novel_not_in_catalog	TP53INP1	novel	5631	5	NA	NA	1	-1	any annotated donor/acceptor	FALSE	canonical	1	1501	junction_5	94259.61821989306	NA	7	NA	TRUE	NA	NA	NA	C	coding	164	495	459	953	25.0	0	True	AATAAA	-16
PB.10778.4	chr7	-	4301	22	full-splice_match	COG5	ENST00000297135.7	4060	22	580	-821	0	-188	multi-exon	FALSE	canonical	1	129228	junction_21	63061.13215597743	NA	0	NA	TRUE	NA	NA	NA	C	coding	829	2490	39	2528	10.0	-15	True	AATAAA	-16
PB.8459.7	chr3	+	2511	10	incomplete-splice_match	HPS3	ENST00000296051.6	4665	17	56	14331	1	5266	3prime_fragment	FALSE	canonical	1	157291	junction_1	40549.691214059276	NA	0	NA	TRUE	NA	NA	NA	C	coding	640	1923	85	2007	60.0	-12	True	NA	NA
PB.617.9	chr1	+	2450	10	novel_not_in_catalog	CAPZA1	novel	3020	10	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	19475	junction_9	394925.58203018014	NA	1	NA	TRUE	NA	NA	NA	C	coding	318	957	14	970	25.0	0	True	AATATA	-14
PB.911.19	chr1	+	2502	17	novel_in_catalog	DCAF6	novel	724	5	NA	NA	2	-305	combination_of_known_junctions	FALSE	canonical	1	85404	junction_10	237784.57245884056	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2298	203	2500	65.0	14	True	NA	NA
PB.584.6	chr1	+	2482	19	full-splice_match	STXBP3	ENST00000370008.3	2478	19	-13	9	1	-9	multi-exon	FALSE	canonical	1	285570	junction_9	58704.49084016034	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	64	1842	35.0	1	True	AATAAA	-11
PB.11724.3	chr9	+	3044	10	novel_in_catalog	HSDL2	novel	3350	11	NA	NA	-38	-1	no_combination_of_known_junctions	FALSE	canonical	1	6950	junction_6	166246.0696654507	NA	1	NA	TRUE	NA	NA	NA	C	coding	353	1062	123	1184	30.0	-90	False	NA	NA
PB.10714.1	chr7	-	2694	5	full-splice_match	ZNF3	ENST00000424697.5	2718	5	24	0	0	0	multi-exon	FALSE	canonical	1	25694	junction_4	77362.25906853742	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	183	1523	15.0	-18	True	ATTAAA	-22
PB.617.4	chr1	+	3193	3	full-splice_match	CAPZA1	ENST00000485542.5	739	3	12	-2466	-2	2466	multi-exon	FALSE	canonical	1	891238	junction_2	274893.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-15	True	NA	NA
PB.10714.3	chr7	-	3094	5	novel_in_catalog	ZNF3	novel	1441	6	NA	NA	-4	2	intron_retention	FALSE	canonical	1	162950	junction_3	26337.73237557668	NA	0	NA	TRUE	NA	NA	NA	C	coding	367	1104	825	1928	25.0	8290	False	ATTAAA	-17
PB.10714.2	chr7	-	2733	4	novel_in_catalog	ZNF3	novel	1441	6	NA	NA	-29	-1	no_combination_of_known_junctions	FALSE	canonical	1	518	junction_3	100603.39431428522	NA	3	NA	TRUE	NA	NA	NA	C	coding	410	1233	331	1563	10.0	-1	True	ATTAAA	-21
PB.10714.5	chr7	-	2888	6	novel_not_in_catalog	ZNF3	novel	1441	6	NA	NA	-8	2	any annotated donor/acceptor	FALSE	canonical	1	7675	junction_3	90666.44488232679	NA	1	NA	TRUE	NA	NA	NA	C	coding	410	1233	490	1722	25.0	8286	False	ATTAAA	-17
PB.10714.4	chr7	-	2807	6	full-splice_match	ZNF3	ENST00000299667.8	2799	6	3	-11	0	2	multi-exon	FALSE	canonical	1	162950	junction_4	23976.35366439192	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	301	1641	25.0	-15	True	ATTAAA	-17
PB.10714.7	chr7	-	2996	6	novel_not_in_catalog	ZNF3	novel	1441	6	NA	NA	-31	0	any annotated donor/acceptor	FALSE	canonical	1	2835	junction_5	92829.88014944326	NA	1	1	TRUE	NA	NA	NA	C	coding	451	1356	477	1832	30.0	-3	True	ATTAAA	-15
PB.10714.6	chr7	-	3166	7	novel_not_in_catalog	ZNF3	novel	1441	6	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	89040.21140099193	NA	2	1	TRUE	NA	NA	NA	C	coding	410	1233	770	2002	30.0	-16	True	ATTAAA	-15
PB.10714.9	chr7	-	2661	6	novel_not_in_catalog	ZNF3	novel	1441	6	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	7675	junction_3	90666.44488232679	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	463	1695	90.0	1	True	NA	NA
PB.10714.8	chr7	-	2579	4	full-splice_match	ZNF3	ENST00000412947.5	595	4	-34	-1950	0	-1	multi-exon	FALSE	canonical	1	22569	junction_3	90317.89963235417	NA	2	NA	TRUE	NA	NA	NA	C	coding	410	1233	184	1416	30.0	-1	True	ATTAAA	-14
PB.848.9	chr1	+	2338	5	novel_not_in_catalog	PEA15	novel	2471	4	NA	NA	5	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1315336.9365090453	NA	1	NA	TRUE	NA	NA	NA	C	coding	130	393	141	533	45.0	1	True	AATAAA	-18
PB.10102.3	chr6	-	4406	15	full-splice_match	RNGTT	ENST00000369475.7	1725	15	-232	-2449	80	2	multi-exon	FALSE	canonical	1	11631	junction_4	44633.04494224348	NA	0	NA	TRUE	NA	NA	NA	C	coding	574	1725	233	1957	25.0	-24	False	AATAAA	-20
PB.10102.1	chr6	-	4825	16	full-splice_match	RNGTT	ENST00000369485.8	4553	16	102	-374	-58	374	multi-exon	TRUE	canonical	1	124765	junction_14	22194.7096965821	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	211	2004	40.0	-2	True	AATAAA	-13
PB.10102.6	chr6	-	4260	16	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	-57	1	any annotated donor/acceptor	FALSE	canonical	1	2624	junction_15	45070.520965655094	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	106	1812	25.0	-1	True	AATAAA	-19
PB.10102.7	chr6	-	2944	4	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	202085	1	any annotated donor/acceptor	FALSE	canonical	1	2824	junction_3	91198.63955978485	NA	0	NA	TRUE	NA	NA	NA	C	coding	71	216	281	496	25.0	NA	False	AATAAA	-19
PB.10102.4	chr6	-	2796	3	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	301195	2	any annotated donor/acceptor	FALSE	canonical	1	288	junction_2	101164.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-20
PB.10102.5	chr6	-	4335	16	full-splice_match	RNGTT	ENST00000369485.8	4553	16	217	1	57	-1	multi-exon	FALSE	canonical	1	124765	junction_14	22194.7096965821	NA	1	NA	TRUE	NA	NA	NA	C	coding	597	1794	96	1889	30.0	113	False	AATAAA	-17
PB.10102.8	chr6	-	4522	17	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	-56	-1	any annotated donor/acceptor	FALSE	canonical	1	2511	junction_3	54970.10269878385	NA	14	3	TRUE	NA	NA	NA	C	coding	527	1584	209	1792	30.0	0	True	AATAAA	-17
PB.10102.9	chr6	-	4442	16	novel_not_in_catalog	RNGTT	novel	4553	16	NA	NA	-38	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	45737.624744040506	NA	4	1	TRUE	NA	NA	NA	C	coding	601	1806	191	1996	30.0	18	True	AATAAA	-17
PB.617.1	chr1	+	2271	10	full-splice_match	CAPZA1	ENST00000263168.3	3020	10	661	88	2	-88	multi-exon	FALSE	canonical	1	270122	junction_9	349379.07527777134	NA	2	NA	TRUE	NA	NA	NA	C	coding	286	861	12	872	20.0	2	True	AATAAA	-13
PB.2215.9	chr11	+	1901	5	full-splice_match	TYR	ENST00000263321.5	2485	5	583	1	142	-1	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	0	NA	TRUE	NA	NA	NA	C	coding	499	1500	10	1509	30.0	-649	False	AATAAA	-15
PB.2215.8	chr11	+	2245	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-22	-1	any annotated donor/acceptor	FALSE	canonical	1	17	junction_5	61812.50664064676	NA	34	1	TRUE	NA	NA	NA	C	coding	457	1374	84	1457	30.0	-4	True	AATAAA	-15
PB.4085.12	chr15	+	2972	8	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	0	1	intron_retention	FALSE	canonical	1	22967	junction_1	86851.65147114536	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	1118	1615	35.0	-5	True	NA	NA
PB.4085.13	chr15	+	1777	8	full-splice_match	RCCD1	ENST00000394258.6	2689	8	14	898	0	5	multi-exon	FALSE	canonical	1	53419	junction_1	70803.40493369004	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	189	1319	0.0	-5	True	NA	NA
PB.4085.14	chr15	+	2883	7	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	1	-3	intron_retention	FALSE	canonical	1	53419	junction_1	64389.3283023066	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	1033	1530	35.0	-4	True	NA	NA
PB.4085.15	chr15	+	1980	9	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	1	5	intron_retention	FALSE	canonical	1	22967	junction_1	85727.1031905167	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	272	1402	15.0	-4	True	NA	NA
PB.4085.16	chr15	+	2741	9	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	11	-7	intron_retention	FALSE	canonical	1	22967	junction_1	85727.1031905167	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	262	1392	35.0	6	True	NA	NA
PB.4085.17	chr15	+	2537	6	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	11	1	intron_retention	FALSE	canonical	1	53419	junction_1	70381.8601516044	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	1023	1376	5.0	6	True	NA	NA
PB.2215.1	chr11	+	2777	1	novel_in_catalog	TYR	novel	2485	5	NA	NA	-116	-20058	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	283	852	178	1029	65.0	-907	False	NA	NA
PB.4085.19	chr15	+	3106	8	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	4	-2	intron_retention	FALSE	canonical	1	30259	junction_1	76452.87819624448	NA	19	2	TRUE	NA	NA	NA	C	coding	376	1131	622	1752	40.0	4	True	NA	NA
PB.2215.3	chr11	+	1979	5	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-87	-96	any annotated donor/acceptor	FALSE	canonical	1	212	junction_3	56541.13576414963	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	149	1285	35.0	-878	False	ATTAAA	-19
PB.2215.2	chr11	+	4507	5	full-splice_match	TYR	ENST00000263321.5	2485	5	419	-2441	-22	2441	multi-exon	FALSE	canonical	1	73661	junction_4	29295.74358588633	NA	1	NA	TRUE	NA	NA	NA	C	coding	529	1590	84	1673	80.0	-4	True	NA	NA
PB.2215.5	chr11	+	2023	6	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	19	-96	any annotated donor/acceptor	FALSE	canonical	1	3245	junction_5	60164.743195329946	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	43	1458	35.0	-8	True	ATTAAA	-19
PB.2215.4	chr11	+	1782	4	novel_in_catalog	TYR	novel	2485	5	NA	NA	18	-96	no_combination_of_known_junctions	FALSE	canonical	1	808	junction_2	61183.803337884194	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	44	1348	35.0	-9	True	ATTAAA	-19
PB.2215.7	chr11	+	2210	7	novel_not_in_catalog	TYR	novel	2485	5	NA	NA	-57	-101	any annotated donor/acceptor	FALSE	canonical	1	58	junction_5	62429.57879816799	NA	2	1	TRUE	NA	NA	NA	C	coding	599	1800	119	1918	55.0	-848	False	ATTAAA	-14
PB.2215.6	chr11	+	1798	4	novel_in_catalog	TYR	novel	2485	5	NA	NA	-73	-102	no_combination_of_known_junctions	FALSE	canonical	1	94	junction_1	39207.51168675037	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	135	980	55.0	-864	False	ATTAAA	-13
PB.9157.6	chr5	-	7973	39	novel_not_in_catalog	MYO10	novel	11456	41	NA	NA	-9	-18	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_33	107198.97530028007	NA	1	1	TRUE	NA	NA	NA	B	coding	2035	6108	478	6585	15.0	-21	True	AATAAA	-12
PB.9003.8	chr4	+	2526	9	full-splice_match	USP38	ENST00000510377.5	4135	9	152	1457	124	-1457	multi-exon	FALSE	canonical	1	122988	junction_3	36223.987042212444	NA	0	NA	TRUE	NA	NA	NA	C	coding	714	2142	383	2524	30.0	1	True	AATAAA	-33
PB.10595.2	chr7	-	1557	5	full-splice_match	BCL7B	ENST00000454871.5	887	5	-79	-591	-1	-7	multi-exon	FALSE	canonical	1	42778	junction_3	227055.21604061424	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-1	True	ATTAAA	-8
PB.9003.2	chr4	+	7035	10	full-splice_match	USP38	ENST00000307017.8	7009	10	-28	2	0	-2	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3129	535	3663	25.0	0	True	CATAAA	-15
PB.9003.1	chr4	+	4578	10	full-splice_match	USP38	ENST00000307017.8	7009	10	101	2330	101	-2330	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3129	406	3534	10.0	0	True	ATTAAA	-27
PB.10595.1	chr7	-	1666	6	full-splice_match	BCL7B	ENST00000223368.6	1975	6	310	-1	-5	1	multi-exon	FALSE	canonical	1	420483	junction_5	94676.25413502585	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	115	723	10.0	-5	True	ATTAAA	-16
PB.9003.7	chr4	+	3780	10	full-splice_match	USP38	ENST00000307017.8	7009	10	-28	3257	0	-3257	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	0	NA	TRUE	NA	NA	NA	C	coding	1042	3129	535	3663	25.0	0	True	NA	NA
PB.9003.6	chr4	+	4063	10	full-splice_match	USP38	ENST00000307017.8	7009	10	-28	2974	0	-2974	multi-exon	FALSE	canonical	1	122988	junction_3	35307.540233752115	NA	2	NA	TRUE	NA	NA	NA	C	coding	1042	3129	535	3663	35.0	0	True	TATAAA	-39
PB.9003.5	chr4	+	4130	9	full-splice_match	USP38	ENST00000510377.5	4135	9	0	5	0	-5	multi-exon	FALSE	canonical	1	122988	junction_3	36223.987042212444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1004	3015	535	3549	20.0	0	True	AATAAA	-27
PB.9003.4	chr4	+	4475	11	novel_not_in_catalog	USP38	novel	4135	9	NA	NA	0	-2467	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67099.99764746643	NA	11	NA	TRUE	NA	NA	NA	C	coding	1042	3129	440	3568	35.0	0	True	AGTAAA	-16
PB.4956.3	chr17	+	1940	12	full-splice_match	PSMD3	ENST00000264639.8	2158	12	217	1	178	-1	multi-exon	FALSE	canonical	1	1280182	junction_3	429166.03568791726	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	66	1562	20.0	178	False	AATAAA	-16
PB.4956.2	chr17	+	2424	10	novel_in_catalog	PSMD3	novel	2158	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	1	1280182	junction_3	456548.59280599677	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	150	1106	20.0	-14	True	AATAAA	-16
PB.4956.1	chr17	+	1804	9	novel_in_catalog	PSMD3	novel	2158	12	NA	NA	10	0	no_combination_of_known_junctions	FALSE	canonical	1	9066	junction_6	743374.4297000923	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	165	1430	20.0	0	True	AATAAA	-12
PB.6974.1	chr2	-	2580	6	novel_in_catalog	METTL21A	novel	869	5	NA	NA	4	13	combination_of_known_junctions	TRUE	canonical	1	13514	junction_3	73364.7945734192	NA	4	NA	TRUE	NA	NA	NA	C	coding	236	711	227	937	45.0	2	True	AATAAA	-30
PB.6974.3	chr2	-	1835	4	full-splice_match	METTL21A	ENST00000411432.5	4805	4	-32	3002	-19	-13	multi-exon	FALSE	canonical	1	72192	junction_3	59423.714863867455	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	250	906	100.0	-21	True	NA	NA
PB.4956.4	chr17	+	2283	11	novel_in_catalog	PSMD3	novel	2158	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	1280182	junction_3	448296.0700309674	NA	0	NA	TRUE	NA	NA	NA	C	coding	226	681	1225	1905	20.0	-1	True	AATAAA	-16
PB.9182.2	chr5	-	3007	1	full-splice_match	NIPBL-DT	ENST00000649921.1	5337	1	28	2302	-15	-1747	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-17	True	NA	NA
PB.9182.1	chr5	-	5332	1	full-splice_match	NIPBL-DT	ENST00000649921.1	5337	1	6	-1	6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	116	351	1	351	10.0	-39	True	AATAAA	-15
PB.911.16	chr1	+	3039	20	full-splice_match	DCAF6	ENST00000367843.7	3302	20	254	9	97	0	multi-exon	FALSE	canonical	1	102380	junction_10	266251.2418328081	NA	2	NA	TRUE	NA	NA	NA	C	coding	733	2202	439	2640	20.0	35	False	ATTAAA	-20
PB.933.5	chr1	+	2454	7	novel_in_catalog	METTL13	novel	759	4	NA	NA	-13	55	intron_retention	FALSE	canonical	1	34477	junction_4	129326.56937306254	NA	1	NA	TRUE	NA	NA	NA	C	coding	644	1935	318	2252	10.0	-23	True	AATAAA	-30
PB.4835.2	chr17	+	2170	12	full-splice_match	MAP2K3	ENST00000342679.8	2303	12	36	97	-2	-70	multi-exon	FALSE	canonical	1	530782	junction_1	120464.25207236946	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	214	1257	40.0	-3	True	AATATA	-9
PB.4835.1	chr17	+	2323	13	full-splice_match	MAP2K3	ENST00000395491.6	2401	13	8	70	8	-70	multi-exon	FALSE	canonical	1	13786	junction_1	295687.4738623136	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	454	1410	40.0	1	True	AATATA	-9
PB.4571.1	chr16	+	2428	11	full-splice_match	BCO1	ENST00000258168.6	2670	11	242	0	1	0	multi-exon	FALSE	canonical	1	4787	junction_10	2421.505077426021	NA	0	NA	TRUE	NA	NA	NA	A	coding	547	1644	220	1863	25.0	-1	True	AATAAA	-15
PB.1068.10	chr1	-	1702	6	full-splice_match	RAB29	ENST00000235932.8	1723	6	11	10	2	0	multi-exon	FALSE	canonical	1	26729	junction_5	81675.9488843564	NA	2	1	TRUE	NA	NA	NA	C	coding	203	612	196	807	90.0	23	False	NA	NA
PB.1068.12	chr1	-	3487	1	novel_in_catalog	RAB29	novel	1571	4	NA	NA	-1	-366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	11	True	NA	NA
PB.1123.1	chr1	-	5834	10	full-splice_match	GPATCH2	ENST00000366935.7	5851	10	11	6	11	-6	multi-exon	FALSE	canonical	1	33926	junction_3	44005.208590981616	NA	1	NA	TRUE	NA	NA	NA	C	coding	528	1587	101	1687	50.0	-5	True	ATTAAA	-16
PB.1123.2	chr1	-	2341	10	full-splice_match	GPATCH2	ENST00000366935.7	5851	10	10	3500	10	-3500	multi-exon	FALSE	canonical	1	33926	junction_3	44005.208590981616	NA	1	NA	TRUE	NA	NA	NA	C	coding	504	1515	174	1688	15.0	-6	True	AATAAA	-22
PB.1123.3	chr1	-	3243	6	full-splice_match	GPATCH2	ENST00000366934.3	3218	6	-18	-7	-18	7	multi-exon	FALSE	canonical	1	60544	junction_1	38055.22815067596	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	130	1260	15.0	-34	True	AATAAA	-34
PB.1014.1	chr1	-	4443	5	novel_not_in_catalog	GLRX2	novel	5612	5	NA	NA	4	-148	any annotated donor/acceptor	FALSE	canonical	1	413	junction_1	184184.58242802924	NA	1	NA	TRUE	NA	NA	NA	A	coding	227	684	46	729	30.0	-14	True	AATAAA	-26
PB.10986.8	chr8	-	2682	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2266947.3924711696	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	228	1247	30.0	-28	False	AATAAA	-16
PB.848.4	chr1	+	2592	3	incomplete-splice_match	PEA15	ENST00000360472.8	2471	4	29	6	-14	-6	intron_retention	FALSE	canonical	1	1933448	junction_1	419023.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	115	348	160	507	45.0	1	True	AATAAA	-19
PB.10986.6	chr8	-	2797	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	11	NA	TRUE	NA	NA	NA	C	coding	339	1020	144	1163	30.0	-32	False	AATAAA	-16
PB.10986.7	chr8	-	2736	11	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1825084.5783487542	NA	5	1	TRUE	NA	NA	NA	C	coding	339	1020	144	1163	30.0	-32	False	AATAAA	-16
PB.933.4	chr1	+	2438	9	novel_in_catalog	METTL13	novel	759	4	NA	NA	-21	58	combination_of_known_junctions	FALSE	canonical	1	25286	junction_1	121255.81411111799	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	137	2233	5.0	-31	True	AATAAA	-33
PB.10986.5	chr8	-	2920	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2266947.3924711696	NA	6	NA	TRUE	NA	NA	NA	C	coding	339	1020	202	1221	30.0	-2	True	AATAAA	-16
PB.10181.3	chr6	+	2457	14	full-splice_match	KPNA5	ENST00000368564.6	11311	14	2	8852	2	-8852	multi-exon	FALSE	canonical	1	64004	junction_1	21003.004319331787	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	156	1766	40.0	-22	True	ATTAAA	-13
PB.10986.3	chr8	-	3258	12	novel_not_in_catalog	CTSB	novel	660	4	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2266947.3924711696	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	203	1222	30.0	-3	True	AATAAA	-16
PB.11724.7	chr9	+	2272	9	full-splice_match	HSDL2	ENST00000398803.1	2983	9	0	711	0	-711	multi-exon	FALSE	canonical	1	13887	junction_3	171786.15380593832	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	85	1122	25.0	-52	False	AATAAA	-19
PB.4552.3	chr16	-	3646	26	full-splice_match	WDR59	ENST00000262144.10	5898	26	18	2234	18	478	multi-exon	FALSE	canonical	1	100346	junction_25	57988.2302682053	NA	0	NA	TRUE	NA	NA	NA	C	coding	974	2925	114	3038	85.0	-23	True	AATAAA	-15
PB.4552.2	chr16	-	3772	27	novel_not_in_catalog	WDR59	novel	5898	26	NA	NA	17	478	any annotated donor/acceptor	FALSE	canonical	1	1159	junction_25	81680.74926221589	NA	1	NA	TRUE	NA	NA	NA	C	coding	722	2169	996	3164	85.0	-24	True	AATAAA	-15
PB.4552.1	chr16	-	3802	25	novel_in_catalog	WDR59	novel	5898	26	NA	NA	26	478	intron_retention	FALSE	canonical	1	100346	junction_24	59118.1916294801	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	106	1656	85.0	-15	True	AATAAA	-15
PB.4552.7	chr16	-	3643	13	novel_in_catalog	WDR59	novel	5898	26	NA	NA	9	-239	no_combination_of_known_junctions	FALSE	canonical	1	7417	junction_3	92065.8083324625	NA	2	NA	TRUE	NA	NA	NA	C	coding	299	900	123	1022	85.0	23	False	NA	NA
PB.4552.6	chr16	-	2002	17	full-splice_match	WDR59	ENST00000616369.4	1953	17	-50	1	15	-1	multi-exon	FALSE	canonical	1	100346	junction_16	60554.653624845385	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	117	1832	15.0	-26	True	ATTAAA	-17
PB.4552.5	chr16	-	3407	24	novel_in_catalog	WDR59	novel	5898	26	NA	NA	-24	478	no_combination_of_known_junctions	TRUE	canonical	1	7417	junction_15	85291.01515635019	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	799	2799	85.0	0	True	AATAAA	-15
PB.4552.4	chr16	-	3519	25	novel_in_catalog	WDR59	novel	5898	26	NA	NA	9	478	no_combination_of_known_junctions	FALSE	canonical	1	10280	junction_23	69974.16053563391	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	743	2911	85.0	23	False	AATAAA	-15
PB.8758.2	chr4	-	3533	4	incomplete-splice_match	BEND4	ENST00000611697.1	1348	6	67	441	67	-441	intron_retention	FALSE	canonical	1	15394	junction_3	12693.14310956904	NA	4	NA	TRUE	NA	NA	NA	B	coding	329	990	469	1458	20.0	538	False	AATAAA	-18
PB.8758.1	chr4	-	8318	5	incomplete-splice_match	BEND4	ENST00000504360.5	8692	6	529	0	-166	0	5prime_fragment	FALSE	canonical	1	13742	junction_1	13851.479368193854	NA	0	NA	TRUE	NA	NA	NA	B	coding	441	1326	207	1532	20.0	305	False	AATAAA	-16
PB.8919.3	chr4	-	2691	12	full-splice_match	PAPSS1	ENST00000265174.4	2731	12	39	1	39	-1	multi-exon	FALSE	canonical	1	405415	junction_11	126763.2118638905	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1875	235	2109	25.0	-180	False	AATAAA	-20
PB.8919.4	chr4	-	2575	12	novel_in_catalog	PAPSS1	novel	296	2	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	19711	junction_11	214031.58856379238	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	182	1993	25.0	213	False	AATAAA	-20
PB.8919.5	chr4	-	2558	13	novel_in_catalog	PAPSS1	novel	296	2	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1830	junction_12	269342.373716508	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	166	1977	25.0	7	True	AATAAA	-19
PB.8919.6	chr4	-	2281	12	full-splice_match	PAPSS1	ENST00000265174.4	2731	12	213	237	-13	-237	multi-exon	FALSE	canonical	1	405415	junction_11	126763.2118638905	NA	1	NA	TRUE	NA	NA	NA	C	coding	624	1875	61	1935	70.0	-6	True	ATTAAA	-17
PB.8919.7	chr4	-	2289	12	novel_in_catalog	PAPSS1	novel	296	2	NA	NA	-11	-234	combination_of_known_junctions	FALSE	canonical	1	4878	junction_11	217817.032067348	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	129	1940	75.0	105	False	ATTAAA	-20
PB.11900.1	chr9	-	4689	24	novel_in_catalog	SNAPC4	novel	5010	23	NA	NA	-5	-1	combination_of_known_junctions	TRUE	canonical	1	42169	junction_23	42301.13094655128	NA	9	1	TRUE	NA	NA	NA	A	coding	1469	4410	50	4459	20.0	-4	True	AATAAA	-20
PB.4200.9	chr16	-	1760	4	novel_in_catalog	ZNF200	novel	3082	5	NA	NA	10	98	no_combination_of_known_junctions	FALSE	canonical	1	592	junction_3	59700.68281574899	NA	0	NA	TRUE	NA	NA	NA	C	coding	243	732	375	1106	35.0	0	True	GATAAA	-27
PB.405.2	chr1	-	2220	3	full-splice_match	TXNDC12	ENST00000610127.2	1020	3	-19	-1181	-19	1181	multi-exon	FALSE	canonical	1	1494	junction_1	360258.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	563	1627	25.0	-20	True	AATAAA	-18
PB.8092.9	chr3	-	3383	13	full-splice_match	PFKFB4	ENST00000383734.6	1491	13	89	-1981	89	-9	multi-exon	TRUE	canonical	1	4969	junction_4	64148.48495331402	NA	2	NA	TRUE	NA	NA	NA	C	coding	434	1305	25	1329	45.0	1	True	AATAAA	-9
PB.4200.5	chr16	-	3144	6	novel_in_catalog	ZNF200	novel	3082	5	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	1	725	junction_5	59468.43923763259	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	397	1578	5.0	-873	False	NA	NA
PB.7813.2	chr22	+	2617	14	novel_not_in_catalog	ZC3H7B	novel	5909	23	NA	NA	4	10123	any annotated donor/acceptor	FALSE	canonical	1	26053	junction_13	148241.40330068456	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	254	1792	95.0	-48	True	NA	NA
PB.4200.1	chr16	-	3013	5	full-splice_match	ZNF200	ENST00000414144.6	3306	5	270	23	0	-3	multi-exon	FALSE	canonical	1	35730	junction_4	42022.34697976185	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	285	1469	30.0	-29	True	NA	NA
PB.11724.6	chr9	+	1421	11	full-splice_match	HSDL2	ENST00000398805.7	3350	11	130	1799	-13	-1794	multi-exon	FALSE	canonical	1	344539	junction_4	84388.26144440942	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	98	1354	10.0	-65	False	AGTAAA	-23
PB.4200.2	chr16	-	3720	6	novel_not_in_catalog	ZNF200	novel	3082	5	NA	NA	27	5	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	55103.7137492565	NA	6	1	TRUE	NA	NA	NA	C	coding	394	1185	964	2148	5.0	-819	False	NA	NA
PB.5456.1	chr18	+	4989	11	novel_in_catalog	KIAA1328	novel	1798	11	NA	NA	-9	8	combination_of_known_junctions	FALSE	canonical	1	5548	junction_5	9492.723326843567	NA	0	NA	TRUE	NA	NA	NA	C	coding	613	1842	43	1884	25.0	-34	False	AATAAA	-23
PB.11881.2	chr9	-	5006	4	novel_in_catalog	SURF4	novel	2984	6	NA	NA	1	-14	intron_retention	FALSE	canonical	1	1350008	junction_3	372720.9945972397	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	130	510	20.0	0	True	AATAAA	-18
PB.5456.2	chr18	+	4852	10	full-splice_match	KIAA1328	ENST00000280020.9	4853	10	10	-9	-2	9	multi-exon	FALSE	canonical	1	5548	junction_5	9000.52115912198	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	13	1746	25.0	-4	True	AATAAA	-24
PB.382.3	chr1	+	5696	30	novel_not_in_catalog	MAST2	novel	640	5	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_25	107662.55217112401	NA	1	NA	TRUE	NA	NA	NA	C	coding	1152	3459	306	3764	5.0	-21	True	AATATA	-18
PB.382.2	chr1	+	5782	30	novel_not_in_catalog	MAST2	novel	640	5	NA	NA	-26	0	intron_retention	FALSE	canonical	1	10484	junction_7	110221.55974159141	NA	3	NA	TRUE	NA	NA	NA	C	coding	1805	5418	310	5727	10.0	-25	True	AATATA	-15
PB.382.1	chr1	+	5777	29	full-splice_match	MAST2	ENST00000361297.6	5738	29	-42	3	-42	0	multi-exon	TRUE	canonical	1	33128	junction_1	96412.45756696611	NA	1	NA	TRUE	NA	NA	NA	C	coding	1798	5397	326	5722	10.0	-70	False	AATATA	-15
PB.11881.4	chr9	-	3551	5	novel_in_catalog	SURF4	novel	2984	6	NA	NA	0	-15	intron_retention	FALSE	canonical	1	1350008	junction_4	313191.2428257693	NA	3	NA	TRUE	NA	NA	NA	C	coding	152	459	1065	1523	25.0	-1	True	AATAAA	-17
PB.4960.4	chr17	+	3741	9	full-splice_match	MSL1	ENST00000398532.8	4707	9	664	302	-135	-173	multi-exon	FALSE	canonical	1	223712	junction_3	227647.73577709377	NA	7	NA	TRUE	NA	NA	NA	C	coding	413	1242	255	1496	65.0	-7952	False	AAAACA	-41
PB.11881.9	chr9	-	3032	6	novel_not_in_catalog	SURF4	novel	2984	6	NA	NA	-19	-16	any annotated donor/acceptor	FALSE	canonical	1	4519	junction_3	699440.3497353009	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	457	1005	25.0	-3	True	AATAAA	-16
PB.4960.7	chr17	+	2589	2	incomplete-splice_match	MSL1	ENST00000580086.1	2638	4	1835	-675	1835	6	5prime_fragment	FALSE	canonical	1	556619	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-7409	False	AATAAA	-21
PB.4960.1	chr17	+	1969	3	full-splice_match	MSL1	ENST00000577454.5	2081	3	120	-8	79	8	multi-exon	FALSE	canonical	1	820090	junction_2	83984.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	260	783	524	1306	45.0	-8221	False	AATAAA	-22
PB.4960.2	chr17	+	4167	9	full-splice_match	MSL1	ENST00000398532.8	4707	9	409	131	93	-2	multi-exon	FALSE	canonical	1	223712	junction_3	227647.73577709377	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	510	1751	20.0	-8207	False	AATAAA	-13
PB.4960.3	chr17	+	4520	8	full-splice_match	MSL1	ENST00000578648.5	2267	8	-270	-1983	16	6	multi-exon	FALSE	canonical	1	55632	junction_3	268125.3021948157	NA	0	NA	TRUE	NA	NA	NA	C	coding	598	1797	300	2096	25.0	-15	True	AATAAA	-21
PB.5466.16	chr18	-	2321	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-141	8895	-12	161	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	142	2007	70.0	18	True	AAAAAG	-9
PB.9134.14	chr5	-	2936	19	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	-2	-6	any annotated donor/acceptor	FALSE	canonical	1	4859	junction_11	304756.668872292	NA	3	NA	TRUE	NA	NA	NA	C	coding	593	1782	66	1847	45.0	-1	True	AATAAA	-7
PB.809.4	chr1	-	2805	13	incomplete-splice_match	GON4L	ENST00000361040.9	5118	21	-7	19969	6	-21	3prime_fragment	FALSE	canonical	1	39947	junction_12	44296.54338470817	NA	0	NA	TRUE	NA	NA	NA	B	coding	650	1953	80	2032	100.0	-1	True	NA	NA
PB.6387.8	chr2	+	1517	12	full-splice_match	BABAM2	ENST00000379624.5	1657	12	24	116	-10	-116	multi-exon	FALSE	canonical	1	262061	junction_5	75736.51895980406	NA	0	NA	TRUE	NA	NA	NA	C	coding	383	1152	94	1245	35.0	33	True	AATAAA	-20
PB.11724.5	chr9	+	1823	11	full-splice_match	HSDL2	ENST00000398805.7	3350	11	128	1399	-15	-1394	multi-exon	FALSE	canonical	1	344539	junction_4	84388.26144440942	NA	0	NA	TRUE	NA	NA	NA	C	coding	418	1257	100	1356	70.0	-67	False	AAGAAA	-22
PB.9441.14	chr5	-	1401	9	incomplete-splice_match	KIF3A	ENST00000403231.5	2181	19	-194	14346	25	-10444	3prime_fragment	FALSE	canonical	1	103175	junction_8	43177.169389439776	NA	0	NA	TRUE	NA	NA	NA	B	coding	402	1206	195	1400	70.0	-68	False	NA	NA
PB.5466.14	chr18	-	2482	15	novel_in_catalog	PIAS2	novel	11075	14	NA	NA	0	194	combination_of_known_junctions	FALSE	canonical	1	14288	junction_14	57204.80119799422	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	297	2135	30.0	-1	True	AATAAA	-26
PB.4821.2	chr17	-	2230	6	novel_not_in_catalog	GRAP	novel	2651	5	NA	NA	84	3	any annotated donor/acceptor	FALSE	canonical	1	18	junction_5	39210.669004239135	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	288	941	25.0	NA	False	NA	NA
PB.4821.3	chr17	-	1846	4	novel_not_in_catalog	GRAP	novel	2651	5	NA	NA	6149	-14	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	45853.99165709446	NA	3	NA	TRUE	NA	NA	NA	C	coding	143	432	143	574	35.0	NA	False	NA	NA
PB.11238.1	chr8	+	3067	2	full-splice_match	PDP1	ENST00000297598.4	4272	2	107	1098	15	576	multi-exon	FALSE	canonical	1	141776	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	537	1614	163	1776	20.0	-5	True	AATAAA	-27
PB.5539.1	chr18	+	2130	3	novel_in_catalog	HSBP1L1	novel	771	4	NA	NA	-21	2	intron_retention	FALSE	canonical	1	117274	junction_1	77266.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-34	False	AATAAA	-29
PB.5466.13	chr18	-	2426	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-171	8820	-11	236	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	172	2037	40.0	-12	True	ATTAAA	-20
PB.9134.15	chr5	-	2932	18	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	-24	-6	any annotated donor/acceptor	FALSE	canonical	1	9409	junction_5	261872.98365933742	NA	0	NA	TRUE	NA	NA	NA	C	coding	721	2166	88	2253	45.0	-23	True	AATAAA	-7
PB.848.3	chr1	+	2377	5	novel_not_in_catalog	PEA15	novel	2471	4	NA	NA	-15	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	1315336.9365090453	NA	0	NA	TRUE	NA	NA	NA	C	coding	130	393	161	553	45.0	0	True	AATAAA	-18
PB.933.1	chr1	+	2119	5	incomplete-splice_match	METTL13	ENST00000361735.3	3327	8	-69	6791	-31	1	3prime_fragment	FALSE	canonical	1	238718	junction_2	61729.94151544289	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	336	1889	20.0	-41	False	AATACA	-19
PB.5466.10	chr18	-	4011	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-158	7222	0	1834	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	159	2024	45.0	1	True	AATAAA	-18
PB.5466.11	chr18	-	2790	14	full-splice_match	PIAS2	ENST00000585916.5	11075	14	-162	8447	-2	609	multi-exon	FALSE	canonical	1	90183	junction_13	30905.460038276648	NA	2	NA	TRUE	NA	NA	NA	C	coding	621	1866	163	2028	25.0	-3	True	CATAAA	-20
PB.6194.14	chr19	-	4012	6	full-splice_match	ZNF160	ENST00000418871.5	4219	6	20	187	-1	-186	multi-exon	FALSE	canonical	1	44121	junction_4	48792.09446457489	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	280	2736	75.0	7	True	NA	NA
PB.6194.13	chr19	-	4137	7	full-splice_match	ZNF160	ENST00000429604.5	4336	7	12	187	0	-186	multi-exon	FALSE	canonical	1	37625	junction_5	53347.064162946735	NA	1	NA	TRUE	NA	NA	NA	C	coding	818	2457	405	2861	75.0	-1	True	NA	NA
PB.6194.12	chr19	-	4161	7	novel_in_catalog	ZNF160	novel	4229	7	NA	NA	0	-186	combination_of_known_junctions	FALSE	canonical	1	9902	junction_5	59757.8099405332	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	429	2885	75.0	-1	True	NA	NA
PB.6194.11	chr19	-	4240	6	novel_not_in_catalog	ZNF160	novel	4229	7	NA	NA	0	-186	intron_retention	FALSE	canonical	1	3468	junction_4	61973.30135598716	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2457	508	2964	75.0	-1	True	NA	NA
PB.6194.10	chr19	-	4371	8	novel_in_catalog	ZNF160	novel	4229	7	NA	NA	1	-1	no_combination_of_known_junctions	FALSE	canonical	1	5337	junction_4	64746.146171027045	NA	1	1	TRUE	NA	NA	NA	C	coding	782	2349	562	2910	35.0	6	True	AATAAA	-18
PB.12291.6	chrX	+	1937	9	full-splice_match	HTATSF1	ENST00000218364.4	2775	9	4	834	4	-830	multi-exon	FALSE	canonical	1	517110	junction_7	78043.30515809797	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1767	171	1937	60.0	-159	False	NA	NA
PB.9134.12	chr5	-	3051	19	novel_not_in_catalog	NSUN2	novel	3303	19	NA	NA	11	-6	any annotated donor/acceptor	FALSE	canonical	1	8238	junction_4	304352.84728215734	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	1033	1962	45.0	12	True	AATAAA	-7
PB.8693.5	chr4	-	2996	17	full-splice_match	AFAP1	ENST00000358461.6	7516	17	48	4472	48	35	multi-exon	FALSE	canonical	1	101100	junction_16	35666.424432631225	NA	0	NA	TRUE	NA	NA	NA	C	coding	730	2193	226	2418	25.0	-1	True	NA	NA
PB.5424.9	chr18	-	4475	25	full-splice_match	NPC1	ENST00000269228.9	5157	25	416	266	5	19	multi-exon	FALSE	canonical	1	186914	junction_24	86646.7633387514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1278	3837	140	3976	25.0	-20	True	TATAAA	-19
PB.5424.3	chr18	-	4725	25	novel_in_catalog	NPC1	novel	890	4	NA	NA	8	-64	combination_of_known_junctions	FALSE	canonical	1	32062	junction_18	101308.49088547839	NA	12	3	TRUE	NA	NA	NA	C	coding	1295	3888	137	4024	20.0	-17	True	AATAAA	-16
PB.5424.1	chr18	-	5107	25	full-splice_match	NPC1	ENST00000269228.9	5157	25	-14	64	-14	-64	multi-exon	FALSE	canonical	1	186914	junction_24	86646.7633387514	NA	0	NA	TRUE	NA	NA	NA	C	coding	1278	3837	570	4406	20.0	1	True	AATAAA	-16
PB.5424.6	chr18	-	4534	25	novel_not_in_catalog	NPC1	novel	890	4	NA	NA	2780	-65	any annotated donor/acceptor	FALSE	canonical	1	40	junction_24	105052.15666574039	NA	1	NA	TRUE	NA	NA	NA	C	coding	1123	3372	463	3834	20.0	2780	False	AATAAA	-15
PB.5424.4	chr18	-	4634	25	novel_not_in_catalog	NPC1	novel	890	4	NA	NA	1	-64	any annotated donor/acceptor	FALSE	canonical	1	573	junction_3	117014.65997364715	NA	0	NA	TRUE	NA	NA	NA	C	coding	1240	3723	144	3866	20.0	-24	True	AATAAA	-16
PB.10715.1	chr7	+	1149	10	full-splice_match	COPS6	ENST00000303904.7	1432	10	-3	286	-3	7	multi-exon	FALSE	canonical	1	1755852	junction_1	256297.63471247617	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	41	1024	5.0	-711	False	AATAAA	-30
PB.1429.4	chr10	+	4468	7	novel_in_catalog	REEP3	novel	5205	8	NA	NA	40	-549	no_combination_of_known_junctions	FALSE	canonical	1	4512	junction_5	185761.71551516984	NA	12	NA	TRUE	NA	NA	NA	C	coding	144	435	144	578	10.0	0	True	AATAAA	-17
PB.1429.3	chr10	+	4622	8	full-splice_match	REEP3	ENST00000373758.4	5205	8	35	548	35	-548	multi-exon	FALSE	canonical	1	226325	junction_1	139589.9626772817	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	149	916	15.0	-5	True	AATAAA	-18
PB.1429.2	chr10	+	4583	7	novel_in_catalog	REEP3	novel	5205	8	NA	NA	1	-548	no_combination_of_known_junctions	FALSE	canonical	1	4794	junction_1	215415.12087491807	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	654	224	877	15.0	-7231	False	AATAAA	-18
PB.1429.1	chr10	+	4153	8	full-splice_match	REEP3	ENST00000373758.4	5205	8	0	1052	0	-1052	multi-exon	FALSE	canonical	1	226325	junction_1	139589.9626772817	NA	1	NA	TRUE	NA	NA	NA	C	coding	255	768	184	951	35.0	-7232	False	AATATA	-18
PB.10935.11	chr7	-	2471	15	novel_not_in_catalog	AC021097.2	novel	2185	16	NA	NA	-64	-5674	any annotated donor/acceptor	FALSE	canonical	1	7214	junction_4	200766.79868190255	NA	1	NA	TRUE	NA	NA	NA	C	coding	605	1818	111	1928	10.0	-39	True	AATAAA	-14
PB.10434.23	chr7	+	1736	11	full-splice_match	GPNMB	ENST00000258733.8	2862	11	212	914	1	-58	multi-exon	FALSE	canonical	1	499001	junction_6	131437.70821556498	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1653	84	1736	60.0	0	True	NA	NA
PB.3781.1	chr15	+	5481	10	full-splice_match	KNL1	ENST00000533001.1	5923	10	-14	456	2	2	multi-exon	FALSE	canonical	1	37529	junction_6	16517.27578276607	NA	0	NA	TRUE	NA	NA	NA	C	coding	1774	5322	160	5481	75.0	-13	True	AAAAAG	-38
PB.3781.2	chr15	+	1702	10	full-splice_match	KNL1	ENST00000533001.1	5923	10	-14	4235	2	-1352	multi-exon	FALSE	canonical	1	37529	junction_6	16517.27578276607	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	160	1701	55.0	-13	True	TTTAAA	-44
PB.3781.3	chr15	+	2667	10	full-splice_match	KNL1	ENST00000533001.1	5923	10	-6	3262	-6	-379	multi-exon	FALSE	canonical	1	37529	junction_6	16517.27578276607	NA	1	NA	TRUE	NA	NA	NA	C	coding	838	2514	152	2665	60.0	-5	True	NA	NA
PB.3781.4	chr15	+	7222	26	full-splice_match	KNL1	ENST00000399668.6	7607	26	15	370	-1	-370	multi-exon	FALSE	canonical	1	37529	junction_6	43058.62415823338	NA	2	NA	TRUE	NA	NA	NA	C	coding	2316	6951	147	7097	20.0	0	True	AGTAAA	-21
PB.3781.5	chr15	+	6409	20	incomplete-splice_match	KNL1	ENST00000399668.6	7607	26	23	11154	0	1164	3prime_fragment	FALSE	canonical	1	37529	junction_6	42268.65051061981	NA	12	2	TRUE	NA	NA	NA	C	coding	2090	6270	139	6408	70.0	8	True	AATAGA	-9
PB.10434.25	chr7	+	2612	11	novel_in_catalog	GPNMB	novel	793	6	NA	NA	1103	-1	no_combination_of_known_junctions	FALSE	canonical	1	2671	junction_1	250028.4523170113	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	159	1730	30.0	-9161	False	AATAAA	-15
PB.10434.24	chr7	+	2667	12	full-splice_match	GPNMB	ENST00000647578.1	2751	12	94	-10	66	-1	multi-exon	FALSE	canonical	1	9641	junction_7	298461.1375658327	NA	2	NA	TRUE	NA	NA	NA	C	coding	588	1767	19	1785	30.0	-7380	False	AATAAA	-15
PB.6486.2	chr2	-	3662	18	full-splice_match	PUS10	ENST00000407787.5	1820	18	-29	-1813	-29	-190	multi-exon	FALSE	canonical	1	11918	junction_17	10999.713287864593	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	90	1679	20.0	0	True	CATAAA	-17
PB.11139.1	chr8	-	4604	3	full-splice_match	PLAG1	ENST00000423799.6	1684	3	-59	-2861	-35	-2334	multi-exon	FALSE	canonical	1	13598	junction_2	2451.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	418	1257	343	1599	95.0	-15	False	NA	NA
PB.595.2	chr1	+	4913	3	full-splice_match	CYB561D1	ENST00000420578.6	3326	3	-8	-1579	-7	1	multi-exon	FALSE	canonical	1	26167	junction_1	33373.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	49	738	15.0	-2	True	NA	NA
PB.10490.2	chr7	+	2275	4	novel_not_in_catalog	EPDR1	novel	555	4	NA	NA	-46	-9	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	113105.12586085567	NA	2	1	TRUE	NA	NA	NA	C	coding	224	675	65	739	40.0	-53	True	AATAAA	-20
PB.12192.19	chrX	+	4097	4	novel_in_catalog	BHLHB9	novel	487	4	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	9336	junction_2	11854.832685449424	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	653	2296	35.0	-8	True	NA	NA
PB.11904.6	chr9	-	8193	32	novel_not_in_catalog	SEC16A	novel	1988	2	NA	NA	712	-1	any annotated donor/acceptor	FALSE	canonical	1	81032	junction_30	133690.81119913294	NA	2	NA	TRUE	NA	NA	NA	B	coding	2120	6363	180	6542	10.0	-8	True	AATAAA	-21
PB.12192.13	chrX	+	2822	3	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	2	37566	intron_retention	FALSE	canonical	1	23909	junction_1	23038.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-2	True	NA	NA
PB.12192.12	chrX	+	4626	1	full-splice_match	ARMCX5	ENST00000604957.1	4640	1	4	10	2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	23	NA	NA	NA	NA	NA	C	coding	558	1677	2619	4295	30.0	-2	True	AATAAA	-15
PB.12192.11	chrX	+	2938	7	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	1	37557	no_combination_of_known_junctions	FALSE	canonical	1	26541	junction_5	36451.448826563195	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	NA	NA
PB.12192.10	chrX	+	3772	4	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	1	113574	intron_retention	FALSE	canonical	1	242	junction_2	40388.17676003709	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	909	3425	20.0	-3	True	AATAAA	-21
PB.12192.17	chrX	+	2748	4	full-splice_match	ARMCX5	ENST00000473968.5	782	4	25	-1991	-3	2	multi-exon	FALSE	canonical	1	50365	junction_2	39696.55908961828	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	735	2411	30.0	9	True	AATAAA	-21
PB.12192.16	chrX	+	2643	3	full-splice_match	ARMCX5	ENST00000479502.1	822	3	-11	-1810	5	2	multi-exon	FALSE	canonical	1	67793	junction_1	34286.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	630	2306	30.0	1	True	AATAAA	-21
PB.12192.15	chrX	+	2971	5	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	4	37558	intron_retention	FALSE	canonical	1	20294	junction_3	17969.357034963716	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	NA	NA
PB.12192.14	chrX	+	4877	9	novel_not_in_catalog	ARMCX5	novel	2899	6	NA	NA	4	148276	intron_retention	FALSE	canonical	1	5363	junction_7	30200.134939423286	NA	2	NA	TRUE	NA	NA	NA	C	coding	547	1644	1438	3081	35.0	0	True	NA	NA
PB.10906.6	chr7	-	2274	17	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-3	6	no_combination_of_known_junctions	FALSE	canonical	1	3112	junction_16	136123.57994299184	NA	1	NA	TRUE	NA	NA	NA	C	coding	613	1842	164	2005	30.0	0	True	AATAAA	-24
PB.2262.17	chr11	+	3949	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	193	2209	6	-1285	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	424	2766	40.0	7	True	AATAAA	-17
PB.10906.4	chr7	-	2619	20	full-splice_match	EZH2	ENST00000483967.5	2466	20	-5	-148	-5	6	multi-exon	FALSE	canonical	1	39528	junction_17	135480.33936616074	NA	1	NA	TRUE	NA	NA	NA	C	coding	737	2214	137	2350	30.0	-2	True	AATAAA	-24
PB.10490.1	chr7	+	3690	2	incomplete-splice_match	EPDR1	ENST00000199448.8	2599	3	51	9	-46	-9	intron_retention	FALSE	canonical	1	215676	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	192	579	329	907	40.0	-53	True	AATAAA	-20
PB.10906.2	chr7	-	2556	19	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-6	7	combination_of_known_junctions	FALSE	canonical	1	9477	junction_6	141036.02435648825	NA	1	NA	TRUE	NA	NA	NA	C	coding	704	2115	172	2286	30.0	27	False	AATAAA	-25
PB.10906.3	chr7	-	2856	21	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-29	6	no_combination_of_known_junctions	FALSE	canonical	1	4938	junction_18	154398.1562166061	NA	2	1	TRUE	NA	NA	NA	C	coding	637	1914	674	2587	30.0	4	True	AATAAA	-24
PB.81.6	chr1	-	2335	7	full-splice_match	LZIC	ENST00000400903.6	1405	7	-492	-438	69	-343	multi-exon	FALSE	canonical	1	315297	junction_1	61333.54284475086	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	646	1218	25.0	-1	True	ATTAAA	-16
PB.2262.16	chr11	+	4498	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	191	1662	4	-738	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	2	NA	TRUE	NA	NA	NA	C	coding	780	2343	426	2768	25.0	5	True	ATTAAA	-18
PB.10490.6	chr7	+	2074	3	full-splice_match	EPDR1	ENST00000425345.1	947	3	-1	-1126	-1	-10	multi-exon	FALSE	canonical	1	2683	junction_1	127877.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	163	492	48	539	40.0	182	False	AATAAA	-19
PB.2262.15	chr11	+	2902	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	189	3260	2	-2336	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	0	NA	TRUE	NA	NA	NA	C	coding	780	2343	428	2770	45.0	3	True	ATTAAA	-19
PB.10906.8	chr7	-	2504	19	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-12	1	no_combination_of_known_junctions	FALSE	canonical	1	7246	junction_16	140704.47445986848	NA	1	NA	TRUE	NA	NA	NA	C	coding	698	2097	144	2240	25.0	-9	True	AATAAA	-19
PB.10906.9	chr7	-	2861	21	novel_in_catalog	EZH2	novel	3641	19	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	13252	junction_18	153517.405201324	NA	2	1	TRUE	NA	NA	NA	C	coding	637	1914	685	2598	20.0	20	False	AATAAA	-18
PB.10490.4	chr7	+	2163	1	novel_in_catalog	EPDR1	novel	555	4	NA	NA	-13	-27479	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	171	516	296	811	65.0	-20	True	NA	NA
PB.1475.16	chr10	+	2194	3	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-496	1091	any annotated donor/acceptor	FALSE	canonical	1	40	junction_2	119305.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	238	852	80.0	-19	True	NA	NA
PB.1475.17	chr10	+	2131	3	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-494	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	119325.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	204	615	236	850	30.0	-17	True	AATAAA	-13
PB.1475.14	chr10	+	2296	4	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	472	1091	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	109975.42150357454	NA	2	NA	TRUE	NA	NA	NA	C	coding	204	615	279	893	80.0	59	True	NA	NA
PB.1475.15	chr10	+	1423	2	incomplete-splice_match	FUT11	ENST00000372841.7	2056	3	778	3	505	0	5prime_fragment	FALSE	canonical	1	238651	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	204	615	278	892	30.0	-27	True	NA	NA
PB.1475.12	chr10	+	1823	3	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	-440	1091	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	119325.5	NA	1	1	TRUE	NA	NA	NA	C	coding	204	615	182	796	80.0	0	True	NA	NA
PB.1475.13	chr10	+	1646	3	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	470	-1178	intron_retention	FALSE	canonical	1	10785	junction_2	113933.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	204	615	313	927	95.0	57	True	NA	NA
PB.1475.10	chr10	+	2181	4	novel_not_in_catalog	FUT11	novel	2175	3	NA	NA	95	1091	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_3	97433.72806511442	NA	1	1	TRUE	NA	NA	NA	C	coding	295	888	267	1154	80.0	-47	True	NA	NA
PB.1475.11	chr10	+	2552	2	novel_in_catalog	FUT11	novel	2175	3	NA	NA	470	1091	intron_retention	FALSE	canonical	1	238651	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	204	615	313	927	80.0	57	True	NA	NA
PB.4958.1	chr17	+	2362	10	full-splice_match	THRA	ENST00000264637.8	2538	10	86	90	-3	-90	multi-exon	FALSE	canonical	1	157656	junction_1	155960.58864483822	NA	0	NA	TRUE	NA	NA	NA	A	coding	490	1473	495	1967	25.0	0	True	NA	NA
PB.2262.11	chr11	+	1992	14	incomplete-splice_match	CUL5	ENST00000531427.5	3596	20	-361	12363	-21	-12363	3prime_fragment	FALSE	canonical	1	156600	junction_3	39023.5925455328	NA	0	NA	TRUE	NA	NA	NA	C	coding	514	1542	451	1992	55.0	-20	True	CATAAA	-41
PB.2328.1	chr11	+	4002	3	full-splice_match	TMEM136	ENST00000375095.2	4143	3	147	-6	-20	3	multi-exon	FALSE	canonical	1	35748	junction_1	25840.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	95	832	25.0	-23	False	AGTAAA	-19
PB.2328.2	chr11	+	3777	2	full-splice_match	TMEM136	ENST00000531346.1	3776	2	-2	1	-2	-1	multi-exon	FALSE	canonical	1	9118	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	180	614	25.0	-5	True	AGTAAA	-12
PB.2328.3	chr11	+	3484	3	full-splice_match	TMEM136	ENST00000375095.2	4143	3	166	493	-1	-493	multi-exon	FALSE	canonical	1	35748	junction_1	25840.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	76	813	75.0	-4	True	NA	NA
PB.3005.7	chr12	+	2904	19	novel_not_in_catalog	ATP6V0A2	novel	6542	20	NA	NA	-8	50	any annotated donor/acceptor	FALSE	canonical	1	1030	junction_3	69541.08801181705	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	219	2666	40.0	-5	True	TATAAA	-45
PB.3005.6	chr12	+	5336	19	novel_in_catalog	ATP6V0A2	novel	6542	20	NA	NA	-9	-1057	no_combination_of_known_junctions	FALSE	canonical	1	12498	junction_15	55447.18855837307	NA	4	NA	TRUE	NA	NA	NA	C	coding	816	2451	220	2670	15.0	-6	True	AGTAAA	-16
PB.3005.5	chr12	+	3028	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	35	3479	-3	56	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	214	2784	25.0	0	True	AATATA	-17
PB.3005.4	chr12	+	3064	20	novel_not_in_catalog	ATP6V0A2	novel	6542	20	NA	NA	-14	50	any annotated donor/acceptor	FALSE	canonical	1	1493	junction_5	57362.77643017633	NA	1	NA	TRUE	NA	NA	NA	C	coding	666	2001	826	2826	40.0	-11	True	TATAAA	-45
PB.3005.3	chr12	+	5467	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	21	1054	-17	-1054	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	1	1	TRUE	NA	NA	NA	C	coding	856	2571	228	2798	20.0	-14	True	AGTAAA	-19
PB.3005.2	chr12	+	3785	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	47	2710	9	358	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	202	2772	35.0	12	True	GATAAA	-17
PB.3005.1	chr12	+	3996	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	60	2486	22	582	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	0	NA	TRUE	NA	NA	NA	C	coding	856	2571	189	2759	30.0	25	True	TATAAA	-19
PB.11495.9	chr9	-	4181	18	full-splice_match	DDX58	ENST00000379883.2	4353	18	93	79	-23	-79	multi-exon	FALSE	canonical	1	131787	junction_17	45602.26363326176	NA	0	NA	TRUE	NA	NA	NA	C	coding	925	2778	66	2843	30.0	-37	True	NA	NA
PB.3005.9	chr12	+	6511	20	full-splice_match	ATP6V0A2	ENST00000330342.7	6542	20	34	-3	-4	3	multi-exon	FALSE	canonical	1	109846	junction_1	39111.20510243959	NA	1	NA	TRUE	NA	NA	NA	C	coding	856	2571	215	2785	10.0	-1	True	AATAAA	-22
PB.3005.8	chr12	+	4524	19	novel_in_catalog	ATP6V0A2	novel	6542	20	NA	NA	-5	1203	no_combination_of_known_junctions	FALSE	canonical	1	12498	junction_15	55447.18855837307	NA	1	NA	TRUE	NA	NA	NA	C	coding	816	2451	216	2666	40.0	-2	True	ATTAAA	-19
PB.11828.1	chr9	-	1790	1	antisense	novelGene_SET_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	42	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	-24	True	NA	NA
PB.11828.2	chr9	-	1198	1	antisense	novelGene_SET_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	-32	False	AAAAAG	-43
PB.6186.2	chr19	+	2770	4	full-splice_match	ZNF701	ENST00000391785.7	2634	4	14	-150	-12	150	multi-exon	FALSE	canonical	1	30627	junction_2	17799.161222434675	NA	0	NA	TRUE	NA	NA	NA	C	coding	465	1398	114	1511	25.0	2	True	NA	NA
PB.8693.4	chr4	-	5019	17	full-splice_match	AFAP1	ENST00000358461.6	7516	17	65	2432	65	2075	multi-exon	FALSE	canonical	1	101100	junction_16	35666.424432631225	NA	2	NA	TRUE	NA	NA	NA	C	coding	730	2193	209	2401	35.0	-5	True	AATAAA	-15
PB.5725.1	chr19	-	2090	8	full-splice_match	EPOR	ENST00000222139.10	2411	8	-31	352	-1	68	multi-exon	FALSE	canonical	1	37363	junction_6	38354.97563869514	NA	0	NA	TRUE	NA	NA	NA	A	coding	508	1527	137	1663	30.0	-2	True	NA	NA
PB.1741.1	chr11	+	2294	12	full-splice_match	PTDSS2	ENST00000308020.5	2445	12	140	11	0	-11	multi-exon	FALSE	canonical	1	233015	junction_1	60739.20420852004	NA	1	NA	TRUE	NA	NA	NA	A	coding	487	1464	37	1500	10.0	-15	True	AATAAA	-16
PB.7227.7	chr20	+	3386	17	novel_in_catalog	TPX2	novel	3497	18	NA	NA	-1	-5	no_combination_of_known_junctions	FALSE	canonical	1	44756	junction_1	253053.65857047462	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	423	2666	15.0	-53	True	AATAAA	-20
PB.57.4	chr1	-	2708	1	incomplete-splice_match	KLHL21	ENST00000377658.8	4487	4	9437	1	6384	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	1309	1620	15.0	9456	False	AATAAA	-15
PB.163.4	chr1	+	597	6	full-splice_match	RPL11	ENST00000643754.2	1017	6	0	420	0	-2	multi-exon	FALSE	canonical	1	3494795	junction_1	8200102.167009994	NA	0	NA	TRUE	NA	NA	NA	C	coding	178	537	19	555	25.0	0	True	AATAAA	-42
PB.163.5	chr1	+	2817	3	incomplete-splice_match	RPL11	ENST00000458455.2	879	5	-492	-5	-7	-2	intron_retention	FALSE	canonical	1	23036977	junction_2	2257555.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	122	369	823	1191	10.0	-4045	False	AATAAA	-21
PB.163.2	chr1	+	2409	1	novel_in_catalog	RPL11	novel	660	6	NA	NA	-1	-1733	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.163.3	chr1	+	1600	5	novel_in_catalog	RPL11	novel	660	6	NA	NA	0	-2	intron_retention	FALSE	canonical	1	417835	junction_1	10322149.639474556	NA	0	NA	TRUE	NA	NA	NA	C	coding	132	399	19	417	25.0	0	True	AATAAA	-42
PB.163.1	chr1	+	2574	1	novel_in_catalog	RPL11	novel	660	6	NA	NA	-1	-1568	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-1	True	NA	NA
PB.8711.8	chr4	-	2461	3	novel_not_in_catalog	DCAF16	novel	4548	3	NA	NA	-8	-143	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	22019.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	164	495	951	1445	25.0	-38	True	ATTAAA	-14
PB.57.1	chr1	-	4292	4	full-splice_match	KLHL21	ENST00000377658.8	4487	4	195	0	195	0	multi-exon	FALSE	canonical	1	296500	junction_1	6214.032882650901	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	47	1651	10.0	1016	False	AATAAA	-16
PB.10522.5	chr7	-	3170	6	full-splice_match	NUDCD3	ENST00000355451.7	8256	6	222	4864	-52	-394	multi-exon	FALSE	canonical	1	413050	junction_4	89312.17486457263	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	59	1144	40.0	-1	True	AATAAA	-20
PB.3019.1	chr12	+	3255	18	full-splice_match	SFSWAP	ENST00000261674.8	3246	18	-9	0	-1	0	multi-exon	FALSE	canonical	1	184815	junction_8	64746.68264203803	NA	0	NA	TRUE	NA	NA	NA	C	coding	951	2856	151	3006	5.0	-15	True	AATAAA	-28
PB.3019.2	chr12	+	2401	14	incomplete-splice_match	SFSWAP	ENST00000541286.5	3219	19	-57	21429	-1	-8	3prime_fragment	FALSE	canonical	1	184815	junction_8	66699.2868450116	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2250	151	2400	75.0	-15	True	NA	NA
PB.3019.3	chr12	+	2362	14	incomplete-splice_match	SFSWAP	ENST00000538548.5	2636	15	-10	8416	-1	0	3prime_fragment	FALSE	canonical	1	71279	junction_2	92430.65058696165	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1638	725	2362	85.0	-15	True	NA	NA
PB.3019.4	chr12	+	2178	13	novel_in_catalog	SFSWAP	novel	3536	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	42681	junction_11	97609.73808986593	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2028	151	2178	85.0	-15	True	NA	NA
PB.3019.5	chr12	+	4975	13	novel_in_catalog	SFSWAP	novel	3536	4	NA	NA	1	-8	intron_retention	FALSE	canonical	1	71279	junction_1	94869.95025161053	NA	0	NA	TRUE	NA	NA	NA	C	coding	624	1872	3103	4974	75.0	-13	True	NA	NA
PB.3019.6	chr12	+	3204	18	novel_in_catalog	SFSWAP	novel	3536	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	71279	junction_2	84408.46016429845	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	723	2957	10.0	-13	True	AATAAA	-26
PB.3301.28	chr14	-	2371	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	233847	junction_5	906854.3828134252	NA	0	NA	TRUE	NA	NA	NA	C	coding	171	516	1189	1704	50.0	14	True	AATAAA	-30
PB.3301.27	chr14	-	2377	10	novel_not_in_catalog	HNRNPC	novel	3301	7	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	603805.7004083185	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	829	1710	50.0	16	True	AATAAA	-30
PB.3301.26	chr14	-	2944	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	213933	junction_7	572488.4158707929	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	1396	2277	50.0	14	True	AATAAA	-30
PB.3301.25	chr14	-	2983	9	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	213933	junction_7	632180.6797852449	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	1396	2316	50.0	14	True	AATAAA	-30
PB.3301.24	chr14	-	3043	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	213933	junction_6	600605.816429052	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	1396	2262	50.0	14	True	AATAAA	-30
PB.3301.23	chr14	-	3082	8	novel_in_catalog	HNRNPC	novel	3301	7	NA	NA	-2	0	intron_retention	FALSE	canonical	1	213933	junction_6	659816.2515317334	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	1396	2301	50.0	14	True	AATAAA	-30
PB.3301.21	chr14	-	1779	9	full-splice_match	HNRNPC	ENST00000554455.5	1784	9	-1	6	-1	0	multi-exon	FALSE	canonical	1	233847	junction_6	851664.3440304017	NA	1	NA	TRUE	NA	NA	NA	C	coding	306	921	192	1112	50.0	15	True	AATAAA	-30
PB.3301.20	chr14	-	1776	9	full-splice_match	HNRNPC	ENST00000553300.5	1375	9	15	-416	-2	13	multi-exon	FALSE	canonical	1	233847	junction_6	855594.4623457716	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	193	1074	30.0	14	True	NA	NA
PB.8381.2	chr3	-	2186	10	full-splice_match	RPN1	ENST00000296255.7	2314	10	31	97	-2	92	multi-exon	FALSE	canonical	1	2140963	junction_9	501115.91771033045	NA	1	NA	TRUE	NA	NA	NA	C	coding	607	1824	19	1842	15.0	-1	True	TATAAA	-24
PB.7916.21	chr3	+	1955	1	novel_in_catalog	SETD5	novel	1824	10	NA	NA	0	-29181	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	10	True	NA	NA
PB.7916.20	chr3	+	5027	24	novel_in_catalog	SETD5	novel	1824	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	54385	junction_3	163555.7895608278	NA	2	1	TRUE	NA	NA	NA	C	coding	1455	4368	292	4659	95.0	0	True	TTTAAA	-4
PB.7676.3	chr22	+	3374	2	full-splice_match	TTC28-AS1	ENST00000428858.1	565	2	66	-2875	20	-1	multi-exon	FALSE	canonical	1	3802	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	39	False	AATAAA	-29
PB.3807.17	chr15	+	2045	8	full-splice_match	SNAP23	ENST00000249647.7	2687	8	403	239	10	-237	multi-exon	FALSE	canonical	1	664867	junction_3	125661.35040071236	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	66	701	35.0	-15	True	AAAAAG	-33
PB.7676.1	chr22	+	3064	2	full-splice_match	TTC28-AS1	ENST00000436996.1	662	2	-10	-2392	-2	-1	multi-exon	FALSE	canonical	1	116271	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-72	True	AATAAA	-29
PB.3807.16	chr15	+	2674	8	full-splice_match	SNAP23	ENST00000249647.7	2687	8	397	-384	4	384	multi-exon	FALSE	canonical	1	664867	junction_3	125661.35040071236	NA	2	NA	TRUE	NA	NA	NA	C	coding	211	636	72	707	40.0	-21	True	AATAAA	-25
PB.8001.8	chr3	-	2413	16	full-splice_match	GLB1	ENST00000307363.9	2616	16	74	129	-10	-8	multi-exon	FALSE	canonical	1	379958	junction_15	78274.40483722773	NA	10	2	TRUE	NA	NA	NA	C	coding	677	2034	72	2105	30.0	-11	False	AATAAA	-8
PB.1554.1	chr10	+	2571	1	antisense	novelGene_ALDH18A1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	A	coding	107	324	2	325	25.0	NA	False	NA	NA
PB.8001.6	chr3	-	2130	14	novel_in_catalog	GLB1	novel	2616	16	NA	NA	1	-4	no_combination_of_known_junctions	FALSE	canonical	1	4842	junction_10	171797.06292844543	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	61	1818	25.0	0	True	AATAAA	-12
PB.8001.7	chr3	-	2553	17	novel_in_catalog	GLB1	novel	2616	16	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	11503	junction_16	196841.6136662827	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	65	2242	30.0	-4	True	AATAAA	-11
PB.8001.4	chr3	-	2520	17	novel_in_catalog	GLB1	novel	2616	16	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	3989	junction_16	198037.98302960367	NA	1	NA	TRUE	NA	NA	NA	C	coding	647	1944	261	2204	25.0	-19	True	AATAAA	-16
PB.3969.10	chr15	+	2926	7	novel_in_catalog	PML	novel	2199	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	18781	junction_6	152017.60806454846	NA	1	NA	TRUE	NA	NA	NA	C	coding	593	1782	98	1879	15.0	0	True	NA	NA
PB.8001.2	chr3	-	2516	16	full-splice_match	GLB1	ENST00000307363.9	2616	16	84	16	0	-15	multi-exon	FALSE	canonical	1	379958	junction_15	78274.40483722773	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	62	2095	50.0	-1	True	AATAAA	-23
PB.8001.3	chr3	-	2346	16	full-splice_match	GLB1	ENST00000399402.7	2512	16	47	119	4	1	multi-exon	FALSE	canonical	1	71928	junction_15	140633.07983764782	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	86	2029	20.0	-5	True	AATAAA	-17
PB.8001.1	chr3	-	2486	16	full-splice_match	GLB1	ENST00000399402.7	2512	16	20	6	20	-6	multi-exon	FALSE	canonical	1	71928	junction_15	140633.07983764782	NA	0	NA	TRUE	NA	NA	NA	C	coding	647	1944	113	2056	30.0	-15	True	AATAAA	-32
PB.12114.5	chrX	-	2419	10	incomplete-splice_match	ARHGEF9	ENST00000638021.1	3876	11	-411	3000	-23	-18	3prime_fragment	FALSE	canonical	1	63015	junction_9	62091.08358783177	NA	1	1	TRUE	NA	NA	NA	C	coding	495	1488	907	2394	70.0	33	False	NA	NA
PB.12114.4	chrX	-	2546	11	novel_in_catalog	ARHGEF9	novel	5413	10	NA	NA	-5	4	intron_retention	FALSE	canonical	1	2985	junction_9	99713.959489933	NA	0	NA	TRUE	NA	NA	NA	C	coding	414	1245	1252	2496	20.0	67	False	AATAAA	-18
PB.3874.1	chr15	-	3468	1	novel_in_catalog	BCL2L10	novel	1249	2	NA	NA	30	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	200	603	13	615	45.0	-1	True	AATAAA	-12
PB.12114.6	chrX	-	2123	11	novel_in_catalog	ARHGEF9	novel	5413	10	NA	NA	-1	-18	combination_of_known_junctions	FALSE	canonical	1	16462	junction_10	81049.98113238522	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	611	2098	70.0	-37	True	NA	NA
PB.12114.1	chrX	-	5403	10	novel_in_catalog	ARHGEF9	novel	5413	10	NA	NA	0	-5	intron_retention	FALSE	canonical	1	63015	junction_9	62091.08358783177	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	864	2351	40.0	-46	True	AATAAA	-7
PB.12114.3	chrX	-	5520	11	novel_in_catalog	ARHGEF9	novel	5413	10	NA	NA	0	15	intron_retention	FALSE	canonical	1	1139	junction_10	94350.16958273048	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	915	2480	70.0	-46	True	NA	NA
PB.12114.2	chrX	-	4784	10	full-splice_match	ARHGEF9	ENST00000624210.3	1888	10	-44	-2852	1	15	multi-exon	FALSE	canonical	1	8076	junction_9	76489.49193189872	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	257	1744	70.0	-45	True	NA	NA
PB.3728.3	chr15	+	1890	3	full-splice_match	MKRN3	ENST00000564592.1	629	3	-99	-1162	0	1162	multi-exon	FALSE	canonical	1	10120	junction_2	236.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	182	549	110	658	70.0	0	True	NA	NA
PB.3929.1	chr15	-	2748	9	full-splice_match	MTFMT	ENST00000220058.8	2734	9	-12	-2	0	2	multi-exon	FALSE	canonical	1	135039	junction_5	26301.27338053236	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	27	1196	20.0	-11	True	AATAAA	-15
PB.3929.2	chr15	-	1611	8	novel_in_catalog	MTFMT	novel	2734	9	NA	NA	-2	64	intron_retention	FALSE	canonical	1	5843	junction_6	63467.12095668601	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	536	1063	40.0	-1	True	AATAAA	-18
PB.3929.3	chr15	-	1735	9	full-splice_match	MTFMT	ENST00000220058.8	2734	9	-3	1002	-3	64	multi-exon	FALSE	canonical	1	135039	junction_5	26301.27338053236	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	18	1187	40.0	-2	True	AATAAA	-18
PB.3929.4	chr15	-	1251	9	full-splice_match	MTFMT	ENST00000220058.8	2734	9	-2	1485	-2	-1	multi-exon	FALSE	canonical	1	135039	junction_5	26301.27338053236	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	17	1186	20.0	-1	True	ATTAAA	-17
PB.6698.10	chr2	+	2679	10	incomplete-splice_match	SLC20A1	ENST00000272542.7	3381	11	1129	6	-461	-4	5prime_fragment	FALSE	canonical	1	400289	junction_4	197902.3470933625	NA	0	NA	TRUE	NA	NA	NA	C	coding	586	1761	123	1883	25.0	-8274	False	AATAAA	-19
PB.10368.1	chr7	-	1471	11	full-splice_match	SNX8	ENST00000222990.7	4727	11	20	3236	-3	34	multi-exon	FALSE	canonical	1	223582	junction_10	92786.64138252876	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1383	39	1421	20.0	-22	True	ACTAAA	-11
PB.10368.2	chr7	-	1603	12	novel_not_in_catalog	SNX8	novel	4727	11	NA	NA	1943	33	any annotated donor/acceptor	FALSE	canonical	1	342	junction_11	170486.7571018081	NA	4	1	TRUE	NA	NA	NA	C	coding	410	1233	322	1554	15.0	1976	False	ACTAAA	-10
PB.10368.3	chr7	-	1647	11	novel_not_in_catalog	SNX8	novel	4727	11	NA	NA	1745	34	any annotated donor/acceptor	FALSE	canonical	1	6087	junction_10	140909.44842983384	NA	1	NA	TRUE	NA	NA	NA	C	coding	457	1374	224	1597	20.0	1778	False	ACTAAA	-11
PB.1839.8	chr11	+	1630	14	novel_not_in_catalog	NUCB2	novel	530	3	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	3668	junction_1	374146.9873087013	NA	1	1	TRUE	NA	NA	NA	C	coding	420	1263	271	1533	60.0	-1	True	AATAAA	-7
PB.1839.9	chr11	+	1823	3	full-splice_match	NUCB2	ENST00000532240.2	3262	3	1421	18	1421	-18	multi-exon	FALSE	canonical	1	15700	junction_1	6707.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	136	411	1086	1496	40.0	NA	False	AATAAA	-15
PB.8496.1	chr3	+	1550	7	full-splice_match	IL12A	ENST00000305579.6	1522	7	-29	1	-29	-1	multi-exon	FALSE	canonical	1	12831	junction_1	5634.093144025536	NA	1	NA	TRUE	NA	NA	NA	A	coding	253	762	337	1098	30.0	-119	False	AATAAA	-11
PB.1839.1	chr11	+	1936	13	full-splice_match	NUCB2	ENST00000323688.10	1905	13	-41	10	-31	-10	multi-exon	TRUE	canonical	1	445652	junction_1	298240.8812466955	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	285	1547	40.0	-323	False	AATAAA	-14
PB.1839.2	chr11	+	1633	14	full-splice_match	NUCB2	ENST00000529010.5	2274	14	-51	692	-17	-3	multi-exon	FALSE	canonical	1	445652	junction_1	293759.29928769916	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	271	1533	45.0	-25	True	AATAAA	-10
PB.1839.3	chr11	+	1980	14	full-splice_match	NUCB2	ENST00000529010.5	2274	14	-58	352	-24	334	multi-exon	FALSE	canonical	1	445652	junction_1	293759.29928769916	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	278	1540	40.0	-316	False	AATAAA	-15
PB.1839.4	chr11	+	1763	15	novel_in_catalog	NUCB2	novel	530	3	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	1	14	junction_3	446254.0160440622	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	398	1663	45.0	-29	True	AATAAA	-10
PB.1839.5	chr11	+	1710	15	novel_in_catalog	NUCB2	novel	530	3	NA	NA	-17	0	no_combination_of_known_junctions	FALSE	canonical	1	25603	junction_3	433189.73288420134	NA	1	NA	TRUE	NA	NA	NA	C	coding	420	1263	351	1613	60.0	-25	True	AATAAA	-7
PB.1839.6	chr11	+	5534	17	novel_not_in_catalog	NUCB2	novel	530	3	NA	NA	-16	-6	any annotated donor/acceptor	FALSE	canonical	1	15703	junction_14	474235.6504553167	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	270	1532	50.0	-24	True	AATAAA	-27
PB.1839.7	chr11	+	1541	13	novel_in_catalog	NUCB2	novel	530	3	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	1	57840	junction_10	407438.11851763143	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	259	1431	45.0	-13	True	AATAAA	-20
PB.10044.25	chr6	+	2270	4	incomplete-splice_match	ZNF451	ENST00000370706.8	5268	15	62209	4	62	-4	5prime_fragment	FALSE	canonical	1	197746	junction_2	14006.81582500304	NA	2	NA	TRUE	NA	NA	NA	C	coding	102	309	128	436	25.0	-3622	False	AGTAAA	-18
PB.10044.20	chr6	+	4836	14	full-splice_match	ZNF451	ENST00000357489.7	4998	14	162	0	3	0	multi-exon	FALSE	canonical	1	5996	junction_10	59765.683584870545	NA	1	NA	TRUE	NA	NA	NA	C	coding	1013	3042	63	3104	30.0	0	True	ATTAAA	-17
PB.1893.18	chr11	+	4187	9	novel_in_catalog	CD44	novel	4589	9	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	1	18819	junction_5	1079029.9985969749	NA	0	NA	TRUE	NA	NA	NA	C	coding	330	993	133	1125	40.0	1	True	ATTAAA	-25
PB.10044.22	chr6	+	5130	16	novel_not_in_catalog	ZNF451	novel	581	6	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	5077	junction_13	66932.30009481388	NA	2	NA	TRUE	NA	NA	NA	C	coding	1030	3093	58	3150	30.0	5	True	ATTAAA	-17
PB.10044.23	chr6	+	2090	1	novel_in_catalog	ZNF451	novel	581	6	NA	NA	5062	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	989	False	ATTAAA	-16
PB.9889.2	chr6	-	1545	10	full-splice_match	NELFE	ENST00000481121.5	1543	10	-3	1	0	0	multi-exon	FALSE	canonical	1	593211	junction_9	289801.1941869337	NA	2	1	TRUE	NA	NA	NA	C	coding	336	1011	83	1093	20.0	-4	True	AGTAAA	-19
PB.1158.2	chr1	+	2875	4	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	6	-8	intron_retention	FALSE	canonical	1	3919	junction_1	122901.35143366904	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-7	True	AATAAA	-10
PB.1158.3	chr1	+	1456	3	novel_not_in_catalog	SRP9	novel	377	3	NA	NA	-3	-8	any annotated donor/acceptor	FALSE	canonical	1	499	junction_2	1710.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	0	True	AATAAA	-10
PB.9665.4	chr5	+	2587	17	full-splice_match	RUFY1	ENST00000437570.6	2642	17	59	-4	10	3	multi-exon	FALSE	canonical	1	221483	junction_1	142657.87610288995	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	292	2091	15.0	-33	True	AATAAA	-19
PB.8647.1	chr4	+	1846	11	full-splice_match	TMEM175	ENST00000264771.8	1860	11	11	3	-6	1	multi-exon	TRUE	canonical	1	109362	junction_3	107501.78550056738	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	175	1689	20.0	-62	False	NA	NA
PB.9665.1	chr5	+	2365	18	full-splice_match	RUFY1	ENST00000319449.8	2646	18	266	15	-12	0	multi-exon	FALSE	canonical	1	95644	junction_1	164191.062189892	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	71	1873	20.0	-8960	False	AATAAA	-15
PB.9665.3	chr5	+	2481	19	novel_in_catalog	RUFY1	novel	2646	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	2543	junction_1	199368.97378596585	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	187	1989	20.0	-8935	False	AATAAA	-15
PB.9665.2	chr5	+	2564	17	novel_in_catalog	RUFY1	novel	2646	18	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	1	16136	junction_6	198818.5968843521	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	12	2072	20.0	-2	True	AATAAA	-15
PB.2484.1	chr12	-	3874	1	full-splice_match	HIST4H4	ENST00000539745.1	577	1	0	-3297	0	741	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	103	312	48	359	85.0	-1	True	NA	NA
PB.7998.3	chr3	-	1842	4	full-splice_match	CMTM6	ENST00000205636.3	3863	4	596	1425	-16	1002	multi-exon	FALSE	canonical	1	376094	junction_3	130297.29503801	NA	0	NA	TRUE	NA	NA	NA	C	coding	183	552	68	619	100.0	-3	True	NA	NA
PB.6668.8	chr2	-	2228	6	full-splice_match	MFSD9	ENST00000258436.9	4049	6	-31	1852	3	-121	multi-exon	FALSE	canonical	1	43244	junction_5	10601.61003998921	NA	2	NA	TRUE	NA	NA	NA	C	coding	474	1425	76	1500	30.0	-27	True	ATTAAA	-37
PB.6375.10	chr2	-	3711	19	full-splice_match	GTF3C2	ENST00000359541.6	3992	19	274	7	274	-2	multi-exon	FALSE	canonical	1	5533	junction_18	131788.186759926	NA	1	NA	TRUE	NA	NA	NA	C	coding	911	2736	157	2892	30.0	782	False	NA	NA
PB.9124.8	chr5	-	3500	11	novel_not_in_catalog	LPCAT1	novel	5610	17	NA	NA	5770	0	any annotated donor/acceptor	FALSE	canonical	1	2588	junction_10	213993.0307338302	NA	5	NA	TRUE	NA	NA	NA	C	coding	331	996	283	1278	15.0	6230	False	AGTAAA	-21
PB.3802.9	chr15	-	4681	25	full-splice_match	VPS39	ENST00000318006.9	4844	25	2	161	2	-146	multi-exon	FALSE	canonical	1	230918	junction_21	94211.01785792565	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	162	2789	30.0	-11	True	AATAAA	-30
PB.6375.11	chr2	-	3617	19	full-splice_match	GTF3C2	ENST00000264720.7	3882	19	258	7	-9	-2	multi-exon	FALSE	canonical	1	74792	junction_18	119927.58344277115	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2736	63	2798	30.0	-13	True	NA	NA
PB.3802.5	chr15	-	5163	24	novel_in_catalog	VPS39	novel	4844	25	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	230918	junction_21	93487.20601908691	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	856	3111	10.0	-5	True	AATAAA	-26
PB.11982.6	chrX	+	2016	5	novel_not_in_catalog	CA5BP1	novel	843	4	NA	NA	14	1106	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	40285.02565780491	NA	3	1	TRUE	NA	NA	NA	B	coding	111	336	2	337	70.0	25	True	AATAAA	-9
PB.7157.3	chr20	+	2001	8	full-splice_match	SMOX	ENST00000339123.10	2074	8	49	24	-3	-23	multi-exon	FALSE	canonical	1	37703	junction_5	85861.14346158343	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	177	1685	5.0	0	True	AATAAA	-21
PB.3802.1	chr15	-	4677	25	full-splice_match	VPS39	ENST00000318006.9	4844	25	166	1	3	-1	multi-exon	FALSE	canonical	1	230918	junction_21	94211.01785792565	NA	0	NA	TRUE	NA	NA	NA	C	coding	751	2256	370	2625	10.0	153	False	AATAAA	-26
PB.7157.1	chr20	+	2313	6	novel_in_catalog	SMOX	novel	280	2	NA	NA	13	-18	intron_retention	FALSE	canonical	1	202769	junction_1	49121.562701526505	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	964	1992	5.0	-6482	False	AATAAA	-26
PB.10810.3	chr7	-	3128	24	full-splice_match	AASS	ENST00000417368.6	3163	24	30	5	5	-5	multi-exon	FALSE	canonical	1	88204	junction_11	56475.674564640576	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	106	2886	25.0	-2	True	TATAAA	-16
PB.1308.3	chr10	+	1854	6	full-splice_match	SUV39H2	ENST00000354919.10	1233	6	-53	-568	-12	-5	multi-exon	FALSE	canonical	1	28676	junction_1	79704.76057651763	NA	3	1	TRUE	NA	NA	NA	C	coding	410	1233	54	1286	45.0	-30	False	ATTAAA	-4
PB.1308.2	chr10	+	2937	5	full-splice_match	SUV39H2	ENST00000378331.5	2959	5	10	12	10	-12	multi-exon	FALSE	canonical	1	66462	junction_4	70512.90317160044	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	94	1146	60.0	-36	False	NA	NA
PB.1308.1	chr10	+	3292	5	full-splice_match	SUV39H2	ENST00000378331.5	2959	5	-43	-290	-43	290	multi-exon	FALSE	canonical	1	66462	junction_4	70512.90317160044	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	147	1199	25.0	-89	False	AAAAAG	-13
PB.6253.4	chr19	+	3585	2	full-splice_match	ZNF551	ENST00000599402.1	593	2	-28	-2964	0	-855	multi-exon	FALSE	canonical	1	14840	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	597	1794	281	2074	85.0	2	True	NA	NA
PB.12280.1	chrX	-	1237	1	full-splice_match	RTL8A	ENST00000370775.2	1244	1	-2	9	-2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	113	342	70	411	50.0	-43	True	AATAAA	-15
PB.1308.6	chr10	+	4414	4	incomplete-splice_match	SUV39H2	ENST00000354919.10	1233	6	-23	-568	3	-5	intron_retention	FALSE	canonical	1	28676	junction_1	88586.05458347643	NA	3	NA	TRUE	NA	NA	NA	C	coding	337	1014	24	1037	45.0	0	True	ATTAAA	-4
PB.1308.5	chr10	+	2812	6	full-splice_match	SUV39H2	ENST00000378325.7	1292	6	0	-1520	0	290	multi-exon	FALSE	canonical	1	13466	junction_3	62510.34208960946	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	27	719	25.0	-3	True	AAAAAG	-13
PB.1308.4	chr10	+	1710	5	full-splice_match	SUV39H2	ENST00000378331.5	2959	5	46	1203	3	27	multi-exon	FALSE	canonical	1	66462	junction_4	70512.90317160044	NA	0	NA	TRUE	NA	NA	NA	C	coding	350	1053	58	1110	30.0	0	True	ATTAAA	-36
PB.7541.2	chr21	-	3246	17	novel_in_catalog	CBS	novel	2656	14	NA	NA	7	-2	intron_retention	FALSE	canonical	1	42488	junction_13	239188.0401050131	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	1219	2559	20.0	15	True	NA	NA
PB.6253.3	chr19	+	3548	3	full-splice_match	ZNF551	ENST00000282296.9	4564	3	-2	1018	-2	-1018	multi-exon	FALSE	canonical	1	36670	junction_1	402.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	670	2013	188	2200	65.0	0	True	NA	NA
PB.1308.8	chr10	+	1894	5	novel_not_in_catalog	SUV39H2	novel	2959	5	NA	NA	280	-34	any annotated donor/acceptor	FALSE	canonical	1	2169	junction_1	92806.78954789623	NA	4	NA	TRUE	NA	NA	NA	C	coding	350	1053	303	1355	60.0	336	False	ATTAAA	-20
PB.7541.6	chr21	-	2744	17	novel_in_catalog	CBS	novel	2656	14	NA	NA	-3	15	intron_retention	FALSE	canonical	1	52256	junction_1	239677.5415450071	NA	0	NA	TRUE	NA	NA	NA	C	coding	566	1701	150	1850	5.0	-6	True	NA	NA
PB.7541.4	chr21	-	2496	17	full-splice_match	CBS	ENST00000398165.7	2605	17	107	2	-7	-2	multi-exon	FALSE	canonical	1	385507	junction_14	189206.96938768163	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	154	1809	20.0	-10	True	NA	NA
PB.7541.5	chr21	-	2305	18	novel_in_catalog	CBS	novel	2656	14	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	117046	junction_1	223786.42213681297	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	177	1832	20.0	11	True	NA	NA
PB.10833.6	chr7	+	4855	17	novel_in_catalog	AHCYL2	novel	5056	17	NA	NA	193	-2	combination_of_known_junctions	FALSE	canonical	1	10407	junction_1	53569.08792562735	NA	3	1	TRUE	NA	NA	NA	C	coding	509	1530	162	1691	20.0	0	True	AATAAA	-15
PB.10833.5	chr7	+	2762	2	novel_not_in_catalog	AHCYL2	novel	5056	17	NA	NA	167	-16468	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-4	True	NA	NA
PB.10833.3	chr7	+	1984	17	full-splice_match	AHCYL2	ENST00000474594.5	2047	17	63	0	63	0	multi-exon	FALSE	canonical	1	22210	junction_1	51206.67048817346	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	292	1818	15.0	-7865	False	ATTAAA	-20
PB.10833.2	chr7	+	2067	17	full-splice_match	AHCYL2	ENST00000446544.6	5026	17	-41	3000	-14	0	multi-exon	FALSE	canonical	1	48373	junction_1	46169.82566598388	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	69	1901	15.0	-53	True	ATTAAA	-20
PB.10833.1	chr7	+	5044	17	full-splice_match	AHCYL2	ENST00000325006.7	5056	17	-18	30	-18	-30	multi-exon	FALSE	canonical	1	12907	junction_1	53064.64193935868	NA	0	NA	TRUE	NA	NA	NA	C	coding	611	1836	73	1908	70.0	-80	False	NA	NA
PB.9124.2	chr5	-	4089	15	novel_not_in_catalog	LPCAT1	novel	5610	17	NA	NA	14	0	any annotated donor/acceptor	FALSE	canonical	1	6908	junction_3	241805.84732870306	NA	2	NA	TRUE	NA	NA	NA	C	coding	508	1527	105	1631	15.0	10	True	AGTAAA	-21
PB.8428.15	chr3	-	4050	24	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	2	194	combination_of_known_junctions	FALSE	canonical	1	92879	junction_23	49622.31868144868	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3195	361	3555	40.0	-28	True	AATATA	-11
PB.11313.13	chr8	-	1961	15	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-3	13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	80255.05920288243	NA	1	1	TRUE	NA	NA	NA	B	coding	427	1281	679	1959	45.0	3	True	AAGAAA	-41
PB.6375.17	chr2	-	2971	19	novel_in_catalog	GTF3C2	novel	3992	19	NA	NA	-1	-31	combination_of_known_junctions	FALSE	canonical	1	14559	junction_1	150614.9146263861	NA	1	NA	TRUE	NA	NA	NA	C	coding	864	2595	55	2649	20.0	-5	True	AGTAAA	-23
PB.11313.15	chr8	-	2136	15	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-7	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	89397.23025385755	NA	1	1	TRUE	NA	NA	NA	B	coding	425	1275	862	2136	45.0	-1	True	AAGAAA	-33
PB.11313.14	chr8	-	2138	15	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-7	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	98196.19275019095	NA	1	1	TRUE	NA	NA	NA	B	coding	147	441	1698	2138	45.0	-1	True	AAGAAA	-33
PB.8428.14	chr3	-	4240	24	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	-10	372	combination_of_known_junctions	FALSE	canonical	1	92879	junction_23	49622.31868144868	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	373	3567	30.0	25	False	NA	NA
PB.2408.1	chr12	+	2107	10	full-splice_match	LTBR	ENST00000228918.8	2260	10	158	-5	15	-3	multi-exon	FALSE	canonical	1	550784	junction_1	138980.05475136123	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	169	1476	20.0	23	True	AATAAA	-17
PB.2408.2	chr12	+	2107	9	novel_in_catalog	LTBR	novel	783	3	NA	NA	47	2	combination_of_known_junctions	FALSE	canonical	1	33956	junction_6	287375.8379496265	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	280	1479	25.0	3	True	AATAAA	-14
PB.8428.17	chr3	-	3972	23	full-splice_match	PIK3CB	ENST00000477593.5	4658	23	-175	861	-10	209	multi-exon	FALSE	canonical	1	13511	junction_22	57659.792271167025	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	268	3462	40.0	25	False	AATATA	-26
PB.10970.14	chr8	+	2805	6	incomplete-splice_match	AGPAT5	ENST00000523234.5	2525	7	22045	-502	-7665	-279	5prime_fragment	FALSE	canonical	1	388139	junction_2	40817.198617249574	NA	3	NA	TRUE	NA	NA	NA	C	coding	213	642	165	806	60.0	-7983	False	TATAAA	-13
PB.11850.42	chr9	-	2405	9	incomplete-splice_match	FNBP1	ENST00000443566.6	5227	15	27	36547	0	-4715	3prime_fragment	FALSE	canonical	1	461427	junction_8	223886.58320756824	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	193	1203	85.0	-1	True	AATGAA	-26
PB.11850.43	chr9	-	2348	8	novel_in_catalog	FNBP1	novel	5393	17	NA	NA	-21	-4715	intron_retention	FALSE	canonical	1	4880	junction_3	363001.7666855305	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	241	1146	85.0	4	True	AATGAA	-26
PB.11850.40	chr9	-	1208	10	incomplete-splice_match	FNBP1	ENST00000443566.6	5227	15	35	21776	3	-8970	3prime_fragment	FALSE	canonical	1	461427	junction_9	241358.56922619007	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1023	185	1207	60.0	7	True	NA	NA
PB.11850.41	chr9	-	2771	10	novel_not_in_catalog	FNBP1	novel	5393	17	NA	NA	-23	-2264	intron_retention	FALSE	non_canonical	0	0	junction_1	353378.8503907756	NA	3	1	TRUE	NA	NA	NA	C	coding	336	1011	243	1253	85.0	2	True	NA	NA
PB.7555.1	chr21	+	2145	3	antisense	novelGene_UBE2G2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_2	44.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	NA	False	AATAAA	-31
PB.8428.19	chr3	-	2190	8	novel_in_catalog	PIK3CB	novel	5919	22	NA	NA	-10	-17915	combination_of_known_junctions	FALSE	canonical	1	92879	junction_7	47463.44915784338	NA	2	NA	TRUE	NA	NA	NA	C	coding	348	1047	373	1419	35.0	25	False	AATAAA	-14
PB.8587.3	chr3	+	2865	9	incomplete-splice_match	EIF4A2	ENST00000426808.5	1751	10	3	125	0	-109	intron_retention	FALSE	canonical	1	824037	junction_3	895055.000645203	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	182	979	25.0	-2	True	AATAAA	-24
PB.8348.20	chr3	+	5665	17	novel_not_in_catalog	PARP14	novel	7915	17	NA	NA	0	-960	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	135405.10870496114	NA	4	NA	TRUE	NA	NA	NA	C	coding	1719	5160	26	5185	25.0	0	True	ATTAAA	-37
PB.8587.5	chr3	+	2561	10	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	824037	junction_3	941247.5984104853	NA	0	NA	TRUE	NA	NA	NA	C	coding	267	804	182	985	15.0	-2	True	AATAAA	-17
PB.8587.4	chr3	+	5416	3	novel_in_catalog	EIF4A2	novel	480	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	2307510	junction_1	70867.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-16
PB.10228.39	chr6	-	1754	8	incomplete-splice_match	BCLAF1	ENST00000530767.5	4186	13	-65	12662	1	-94	3prime_fragment	FALSE	canonical	1	66665	junction_4	171232.4887179142	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1308	447	1754	65.0	-3	True	NA	NA
PB.10228.38	chr6	-	2232	8	incomplete-splice_match	BCLAF1	ENST00000628517.2	2512	10	46	2749	-10	-94	3prime_fragment	FALSE	canonical	1	235324	junction_3	141169.2424540885	NA	12	NA	TRUE	NA	NA	NA	C	coding	609	1827	406	2232	65.0	38	True	NA	NA
PB.10228.37	chr6	-	2498	9	novel_in_catalog	BCLAF1	novel	7719	15	NA	NA	0	-94	intron_retention	FALSE	canonical	1	27204	junction_3	171888.40440675456	NA	1	NA	TRUE	NA	NA	NA	C	coding	576	1731	445	2175	65.0	-1	True	NA	NA
PB.10228.36	chr6	-	2334	9	incomplete-splice_match	BCLAF1	ENST00000628517.2	2512	10	21	290	-1	-78	3prime_fragment	FALSE	canonical	1	235324	junction_4	132077.82296191656	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1902	431	2332	70.0	13	True	NA	NA
PB.10228.35	chr6	-	2482	10	incomplete-splice_match	BCLAF1	ENST00000527536.5	5371	12	-15	9737	0	766	3prime_fragment	FALSE	canonical	1	165818	junction_1	136711.24391736073	NA	0	NA	TRUE	NA	NA	NA	C	coding	679	2037	445	2481	30.0	-1	True	AGTAAA	-14
PB.10228.34	chr6	-	2794	11	incomplete-splice_match	BCLAF1	ENST00000527536.5	5371	12	-9	2735	3	-20	3prime_fragment	FALSE	canonical	1	165818	junction_2	129978.33937241236	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2355	439	2793	55.0	5	True	NA	NA
PB.10096.9	chr6	-	2093	21	novel_not_in_catalog	RARS2	novel	1818	20	NA	NA	36	-8	any annotated donor/acceptor	FALSE	canonical	0	0	junction_19	157435.1263121099	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	855	2066	30.0	9	True	ATTAAA	-17
PB.10228.32	chr6	-	3063	12	full-splice_match	BCLAF1	ENST00000527536.5	5371	12	-2	2310	-2	-1	multi-exon	FALSE	canonical	1	165818	junction_3	171643.91899978078	NA	0	NA	TRUE	NA	NA	NA	C	coding	871	2616	234	2849	35.0	12	True	AATAAA	-20
PB.10228.31	chr6	-	3245	13	full-splice_match	BCLAF1	ENST00000531224.5	7263	13	7	4011	0	21	multi-exon	FALSE	canonical	1	165818	junction_4	170271.24681052205	NA	0	NA	TRUE	NA	NA	NA	C	coding	920	2763	247	3009	30.0	-1	True	AATAAA	-42
PB.10228.30	chr6	-	3234	12	full-splice_match	BCLAF1	ENST00000353331.8	7110	12	8	3868	1	15	multi-exon	FALSE	canonical	1	23192	junction_9	196305.5487275886	NA	2	NA	TRUE	NA	NA	NA	C	coding	869	2610	246	2855	50.0	0	True	AGTAAA	-15
PB.4411.1	chr16	+	4316	31	full-splice_match	PHKB	ENST00000299167.12	5464	31	-27	1175	4	0	multi-exon	FALSE	canonical	1	70168	junction_1	107532.23873292864	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	53	3334	95.0	0	True	NA	NA
PB.8580.19	chr3	-	6255	1	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	-1	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-1	True	TATAAA	-41
PB.4411.3	chr16	+	5587	32	novel_in_catalog	PHKB	novel	1032	8	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	138530	junction_1	104399.74572319434	NA	1	NA	TRUE	NA	NA	NA	C	coding	1086	3261	169	3429	30.0	0	True	NA	NA
PB.4411.2	chr16	+	3828	32	full-splice_match	PHKB	ENST00000566044.5	3829	32	4	-3	4	3	multi-exon	FALSE	canonical	1	44778	junction_1	112431.01110937304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	186	3446	55.0	0	True	AATAAA	-19
PB.4411.5	chr16	+	3709	31	full-splice_match	PHKB	ENST00000299167.12	5464	31	-8	1763	-8	15	multi-exon	FALSE	canonical	1	70168	junction_1	107532.23873292864	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	34	3315	55.0	-13	True	AATAAA	-31
PB.4411.4	chr16	+	3956	31	full-splice_match	PHKB	ENST00000299167.12	5464	31	-18	1526	13	252	multi-exon	FALSE	canonical	1	70168	junction_1	107532.23873292864	NA	0	NA	TRUE	NA	NA	NA	C	coding	1093	3282	44	3325	25.0	-905	False	AATAAA	-14
PB.4411.7	chr16	+	4505	32	novel_in_catalog	PHKB	novel	1032	8	NA	NA	-5	116	combination_of_known_junctions	FALSE	canonical	1	138530	junction_1	104399.74572319434	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	147	3407	30.0	-10	True	ATTAAA	-20
PB.5289.10	chr17	+	2091	9	novel_in_catalog	PGS1	novel	2201	10	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	39929	junction_2	104098.75817583033	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	9	1373	25.0	9	True	TATAAA	-5
PB.4411.9	chr16	+	4518	32	full-splice_match	PHKB	ENST00000566044.5	3829	32	30	-719	-1	116	multi-exon	FALSE	canonical	1	44778	junction_1	112431.01110937304	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	160	3420	30.0	-6	True	ATTAAA	-20
PB.4411.8	chr16	+	3793	32	novel_in_catalog	PHKB	novel	1032	8	NA	NA	-2	10	combination_of_known_junctions	FALSE	canonical	1	138530	junction_1	104399.74572319434	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	144	3404	60.0	-7	True	AATAAA	-26
PB.1788.9	chr11	-	1792	9	novel_in_catalog	ARFIP2	novel	3846	8	NA	NA	-9	-7	combination_of_known_junctions	FALSE	canonical	1	41802	junction_4	323836.25269146444	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	106	714	35.0	-11	True	AATAAA	-9
PB.8853.68	chr4	-	3374	25	incomplete-splice_match	SEC31A	ENST00000508502.5	3801	27	10	5646	-9	-59	3prime_fragment	FALSE	canonical	1	173262	junction_3	298130.54318213754	NA	0	NA	TRUE	NA	NA	NA	C	coding	1088	3264	111	3374	70.0	-52	True	NA	NA
PB.7504.4	chr21	+	4068	27	full-splice_match	ITSN1	ENST00000399349.5	5191	27	83	1040	39	163	multi-exon	FALSE	canonical	1	8614	junction_24	101198.83908737854	NA	0	NA	TRUE	NA	NA	NA	C	coding	1144	3435	166	3600	30.0	39	True	ATTAAA	-21
PB.993.1	chr1	+	3549	19	full-splice_match	SWT1	ENST00000367500.8	3830	19	9	272	9	-272	multi-exon	FALSE	canonical	1	12284	junction_1	12936.884620779381	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2703	157	2859	25.0	1	True	AATAAA	-13
PB.8853.62	chr4	-	3788	27	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	1	31517	junction_15	409499.5453860536	NA	9	2	TRUE	NA	NA	NA	C	coding	1223	3672	78	3749	70.0	-19	True	NA	NA
PB.7504.3	chr21	+	5401	29	full-splice_match	ITSN1	ENST00000399352.5	5408	29	6	1	4	1	multi-exon	FALSE	canonical	1	8614	junction_26	102973.99187987857	NA	0	NA	TRUE	NA	NA	NA	C	coding	1215	3648	245	3892	25.0	-1	True	ATTAAA	-18
PB.8853.60	chr4	-	3423	25	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	-10	3	combination_of_known_junctions	FALSE	canonical	1	83080	junction_12	325729.4243560222	NA	0	NA	TRUE	NA	NA	NA	C	coding	1080	3243	142	3384	70.0	9344	False	NA	NA
PB.8853.66	chr4	-	3392	24	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	1	-56	combination_of_known_junctions	FALSE	canonical	1	31517	junction_12	319187.13028144534	NA	3	NA	TRUE	NA	NA	NA	C	coding	1091	3273	120	3392	65.0	9366	False	NA	NA
PB.8853.67	chr4	-	3379	25	incomplete-splice_match	SEC31A	ENST00000395310.6	4259	27	113	5996	0	-59	3prime_fragment	FALSE	canonical	1	369485	junction_11	276360.36245023133	NA	1	NA	TRUE	NA	NA	NA	C	coding	1103	3309	71	3379	70.0	-12	True	NA	NA
PB.8853.64	chr4	-	3704	26	novel_not_in_catalog	SEC31A	novel	1564	8	NA	NA	-1	3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	374463.9379708546	NA	3	2	TRUE	NA	NA	NA	C	coding	961	2886	121	3006	70.0	9362	False	NA	NA
PB.7504.2	chr21	+	3496	22	novel_in_catalog	ITSN1	novel	3913	29	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	1	23175	junction_21	88007.88778659329	NA	1	NA	TRUE	NA	NA	NA	C	coding	1020	3063	281	3343	40.0	-210	False	NA	NA
PB.7504.1	chr21	+	2123	17	incomplete-splice_match	ITSN1	ENST00000399355.6	4003	28	52	42850	8	19364	3prime_fragment	FALSE	canonical	1	128198	junction_1	83666.63010944742	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1926	197	2122	70.0	8	True	NA	NA
PB.8827.28	chr4	-	3834	11	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	6	-352	combination_of_known_junctions	FALSE	canonical	1	84195	junction_10	434606.21458837885	NA	5	NA	TRUE	NA	NA	NA	C	coding	449	1350	189	1538	20.0	-67	True	AATAAA	-27
PB.8832.1	chr4	+	3521	1	intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	108	327	652	978	85.0	NA	False	NA	NA
PB.12091.10	chrX	-	5768	24	novel_in_catalog	SMC1A	novel	9784	25	NA	NA	-21	2635	no_combination_of_known_junctions	FALSE	canonical	1	1247	junction_9	213648.9514483849	NA	0	NA	TRUE	NA	NA	NA	C	coding	812	2439	91	2529	55.0	-37	False	NA	NA
PB.12091.13	chrX	-	5539	22	novel_in_catalog	SMC1A	novel	9784	25	NA	NA	-16	2635	no_combination_of_known_junctions	FALSE	canonical	1	8304	junction_9	215767.6055007209	NA	0	NA	TRUE	NA	NA	NA	C	coding	1111	3336	86	3421	55.0	-32	True	NA	NA
PB.1190.12	chr1	+	1874	16	full-splice_match	GALNT2	ENST00000366672.4	4454	16	29	2551	-21	-2547	multi-exon	FALSE	canonical	1	463193	junction_3	181909.65861066553	NA	1	NA	TRUE	NA	NA	NA	C	coding	571	1716	44	1759	40.0	0	True	AATATA	-13
PB.9069.9	chr4	+	3323	11	novel_in_catalog	GALNT7	novel	4307	12	NA	NA	17	334	no_combination_of_known_junctions	FALSE	canonical	1	3530	junction_1	117195.93827181043	NA	1	NA	TRUE	NA	NA	NA	C	coding	434	1305	275	1579	70.0	1	True	AATAAA	-8
PB.1640.1	chr10	+	1521	4	full-splice_match	SFR1	ENST00000369729.7	1503	4	-19	1	-19	-1	multi-exon	FALSE	canonical	1	30021	junction_1	34069.28181743131	NA	0	NA	TRUE	NA	NA	NA	A	coding	232	699	143	841	15.0	0	True	NA	NA
PB.12091.19	chrX	-	4172	25	full-splice_match	SMC1A	ENST00000322213.8	9784	25	63	5549	4	922	multi-exon	FALSE	canonical	1	370159	junction_24	157711.304417803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	66	3767	35.0	-12	True	AATAAA	-21
PB.12091.18	chrX	-	5405	25	full-splice_match	SMC1A	ENST00000322213.8	9784	25	74	4305	15	2166	multi-exon	FALSE	canonical	1	370159	junction_24	157711.304417803	NA	0	NA	TRUE	NA	NA	NA	C	coding	1233	3702	55	3756	15.0	-1	True	NA	NA
PB.929.2	chr1	+	3211	3	full-splice_match	PRRX1	ENST00000497230.2	3501	3	276	14	276	-14	multi-exon	FALSE	canonical	1	229454	junction_1	25285.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	200	603	7	609	25.0	-27	True	ATTAAA	-15
PB.2432.1	chr12	+	1906	4	novel_in_catalog	TPI1	novel	1763	7	NA	NA	-29	0	intron_retention	FALSE	canonical	1	1093819	junction_2	801012.065033702	NA	0	NA	TRUE	NA	NA	NA	C	coding	115	348	66	413	0.0	-6172	False	AATAAA	-13
PB.2432.6	chr12	+	1213	7	novel_not_in_catalog	TPI1	novel	1763	7	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	240	junction_3	1274728.6603007913	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	32	769	0.0	-6138	False	AATAAA	-12
PB.2432.4	chr12	+	2413	6	novel_in_catalog	TPI1	novel	1763	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	363885	junction_3	1109307.3846856696	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	1465	1968	0.0	0	True	AATAAA	-13
PB.2432.5	chr12	+	1914	5	novel_in_catalog	TPI1	novel	1763	7	NA	NA	2	2	intron_retention	FALSE	canonical	1	587565	junction_3	965468.3578026716	NA	0	NA	TRUE	NA	NA	NA	C	coding	160	483	35	517	35.0	-6141	False	AAGAAA	-28
PB.5309.2	chr17	+	2328	7	incomplete-splice_match	CHMP6	ENST00000325167.9	1664	8	12	1	12	-1	intron_retention	FALSE	canonical	1	226761	junction_1	67853.86130665094	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	67	804	10.0	-22	True	ATTAAA	-18
PB.5309.1	chr17	+	1681	8	full-splice_match	CHMP6	ENST00000325167.9	1664	8	-18	1	-18	-1	multi-exon	FALSE	canonical	1	226761	junction_1	70948.75250661492	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	97	702	10.0	-90	False	ATTAAA	-18
PB.2616.4	chr12	-	2766	12	novel_in_catalog	GALNT6	novel	5207	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	25564	junction_11	44417.07191204379	NA	0	NA	TRUE	NA	NA	NA	B	coding	614	1845	312	2156	85.0	-11	True	NA	NA
PB.8544.14	chr3	+	6430	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	4	4919	1	1467	3prime_fragment	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	1	1	TRUE	NA	NA	NA	C	coding	1162	3489	257	3745	70.0	0	True	NA	NA
PB.8353.1	chr3	-	4121	6	novel_not_in_catalog	HACD2	novel	403	2	NA	NA	132	4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	153069.6754992314	NA	3	1	TRUE	NA	NA	NA	B	coding	120	363	27	389	25.0	127	False	AATAAA	-33
PB.11754.16	chr9	-	1787	8	novel_in_catalog	FBXW2	novel	2154	4	NA	NA	9	7187	combination_of_known_junctions	FALSE	canonical	1	51186	junction_6	151862.64195526383	NA	1	1	TRUE	NA	NA	NA	C	coding	325	978	475	1452	30.0	0	True	AGTAAA	-27
PB.2616.5	chr12	-	2955	14	novel_not_in_catalog	GALNT6	novel	5207	11	NA	NA	-3	-3	any annotated donor/acceptor	FALSE	canonical	1	1660	junction_12	59887.80463549463	NA	1	NA	TRUE	NA	NA	NA	B	coding	614	1845	504	2348	75.0	-15	True	NA	NA
PB.8544.10	chr3	+	4731	30	novel_not_in_catalog	ATP11B	novel	7325	30	NA	NA	-8	-7	any annotated donor/acceptor	FALSE	canonical	1	5836	junction_5	94281.89732717711	NA	1	1	TRUE	NA	NA	NA	C	coding	704	2115	694	2808	45.0	-12	True	AATAAA	-14
PB.8353.5	chr3	-	2051	6	novel_not_in_catalog	HACD2	novel	403	2	NA	NA	132	-2066	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	153069.6754992314	NA	3	1	TRUE	NA	NA	NA	B	coding	120	363	27	389	80.0	127	False	AAGAAA	-30
PB.8544.12	chr3	+	4962	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	3	6388	0	-2	3prime_fragment	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	1	NA	TRUE	NA	NA	NA	C	coding	1162	3489	258	3746	25.0	-1	True	TATAAA	-16
PB.8544.13	chr3	+	8770	29	incomplete-splice_match	ATP11B	ENST00000323116.9	7325	30	4	2579	1	-7	intron_retention	FALSE	canonical	1	145463	junction_1	64093.42343689382	NA	6	1	TRUE	NA	NA	NA	C	coding	1162	3489	257	3745	45.0	0	True	AATAAA	-14
PB.4405.8	chr16	-	2508	16	novel_in_catalog	VPS35	novel	6790	17	NA	NA	-5	-607	no_combination_of_known_junctions	FALSE	canonical	1	22952	junction_4	335117.634173806	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	53	2320	20.0	-17	True	AATAAA	-14
PB.4405.9	chr16	-	2641	17	novel_not_in_catalog	VPS35	novel	6790	17	NA	NA	2	-536	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	329077.82901360677	NA	0	NA	TRUE	NA	NA	NA	C	coding	455	1368	1015	2382	100.0	-10	True	TTTAAA	-16
PB.6910.51	chr2	-	2677	25	full-splice_match	STAT1	ENST00000361099.7	4310	25	90	1543	8	5	multi-exon	FALSE	canonical	1	957747	junction_24	255777.301437041	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	299	2551	35.0	-1	True	AAGAAA	-19
PB.4405.2	chr16	-	3247	17	full-splice_match	VPS35	ENST00000299138.11	6790	17	1	3542	1	3	multi-exon	TRUE	canonical	1	394719	junction_16	240672.5968109672	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	59	2449	5.0	-23	True	AATAAA	-18
PB.4405.3	chr16	-	3106	16	novel_in_catalog	VPS35	novel	6790	17	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	22952	junction_4	335117.634173806	NA	1	NA	TRUE	NA	NA	NA	C	coding	755	2268	46	2313	15.0	-10	True	AATAAA	-13
PB.362.5	chr1	+	1740	10	full-splice_match	DMAP1	ENST00000372289.6	1730	10	-19	9	-1	-9	multi-exon	FALSE	canonical	1	267951	junction_3	101425.50966297908	NA	0	NA	TRUE	NA	NA	NA	C	coding	467	1404	283	1686	10.0	1	True	AATAGA	-14
PB.8580.14	chr3	-	1701	10	full-splice_match	TRA2B	ENST00000456380.5	1697	10	0	-4	0	2	multi-exon	FALSE	canonical	1	267715	junction_8	933996.4064105796	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	746	1312	30.0	-16	True	AATAAA	-17
PB.4405.6	chr16	-	3251	16	novel_in_catalog	VPS35	novel	6790	17	NA	NA	-5	-536	intron_retention	FALSE	canonical	1	394719	junction_15	245311.60930741855	NA	2	NA	TRUE	NA	NA	NA	C	coding	729	2190	803	2992	100.0	12	True	TTTAAA	-16
PB.4405.7	chr16	-	2839	17	novel_in_catalog	VPS35	novel	6790	17	NA	NA	-8	-536	combination_of_known_junctions	FALSE	canonical	1	4070	junction_16	305265.18739940866	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2304	277	2580	100.0	-358	False	TTTAAA	-16
PB.4405.4	chr16	-	3122	16	novel_in_catalog	VPS35	novel	6790	17	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	25491	junction_14	331070.6843820113	NA	1	NA	TRUE	NA	NA	NA	C	coding	729	2190	143	2332	25.0	17	False	AATAAA	-10
PB.4405.5	chr16	-	2705	17	full-splice_match	VPS35	ENST00000299138.11	6790	17	2	4083	2	-538	multi-exon	FALSE	canonical	1	394719	junction_16	240672.5968109672	NA	117	12	TRUE	NA	NA	NA	C	coding	796	2391	58	2448	90.0	-22	True	TTTAAA	-14
PB.8805.2	chr4	-	7329	33	novel_not_in_catalog	UBA6	novel	9564	33	NA	NA	2	-2170	any annotated donor/acceptor	FALSE	canonical	1	1209	junction_32	75633.4115148459	NA	6	NA	TRUE	NA	NA	NA	C	coding	997	2994	161	3154	15.0	1	True	NA	NA
PB.8805.3	chr4	-	6764	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	-20	2820	-20	-2820	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	2	NA	TRUE	NA	NA	NA	C	coding	1052	3159	81	3239	10.0	-52	False	NA	NA
PB.1890.1	chr11	+	2431	1	antisense	novelGene_APIP_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	-4079	False	NA	NA
PB.8805.1	chr4	-	7391	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	24	2149	-2	-2149	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	2	NA	TRUE	NA	NA	NA	C	coding	1052	3159	37	3195	25.0	-8	True	NA	NA
PB.8805.6	chr4	-	5369	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	31	4164	0	2039	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	7	1	TRUE	NA	NA	NA	C	coding	1052	3159	30	3188	40.0	-1	True	AATAAA	-5
PB.8805.7	chr4	-	5329	32	novel_in_catalog	UBA6	novel	9564	33	NA	NA	-2	2060	no_combination_of_known_junctions	FALSE	canonical	1	4302	junction_31	74696.19653379967	NA	2	NA	TRUE	NA	NA	NA	C	coding	1031	3096	32	3127	35.0	-3	True	AATAAA	-26
PB.8805.4	chr4	-	6454	33	full-splice_match	UBA6	ENST00000322244.9	9564	33	0	3110	0	3093	multi-exon	FALSE	canonical	1	181998	junction_32	59248.959461195394	NA	1	NA	TRUE	NA	NA	NA	C	coding	1052	3159	61	3219	20.0	-32	False	NA	NA
PB.8805.8	chr4	-	5306	33	novel_not_in_catalog	UBA6	novel	9564	33	NA	NA	2	2046	any annotated donor/acceptor	FALSE	canonical	1	13792	junction_1	75542.31479545271	NA	3	NA	TRUE	NA	NA	NA	C	coding	1009	3030	28	3057	45.0	1	True	AATAAA	-12
PB.9246.4	chr5	+	2970	20	full-splice_match	KIF2A	ENST00000401507.7	2539	20	275	-706	-15	-1	multi-exon	FALSE	canonical	1	333713	junction_15	90341.79887997475	NA	0	NA	TRUE	NA	NA	NA	C	coding	706	2121	37	2157	35.0	-7	True	AATAAA	-17
PB.8580.15	chr3	-	6523	9	novel_in_catalog	TRA2B	novel	2952	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	382168	junction_8	800264.2613569517	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	5571	6137	25.0	1	True	AATAAA	-14
PB.7376.1	chr20	+	2624	1	full-splice_match	NKILA	ENST00000614771.1	2598	1	-27	1	-27	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-25	True	NA	NA
PB.5115.16	chr17	+	908	8	incomplete-splice_match	LUC7L3	ENST00000393227.6	2284	11	10	5807	6	997	3prime_fragment	FALSE	canonical	1	1154226	junction_1	326525.1929921038	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	783	125	907	60.0	6	True	NA	NA
PB.5115.15	chr17	+	1956	12	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	1	56	combination_of_known_junctions	FALSE	canonical	1	60184	junction_11	700617.9094462212	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	130	1548	25.0	1	True	AATAAA	-22
PB.5115.14	chr17	+	3413	13	novel_not_in_catalog	LUC7L3	novel	7040	10	NA	NA	1	-2	intron_retention	FALSE	canonical	1	10809	junction_10	816822.094398923	NA	16	3	TRUE	NA	NA	NA	C	coding	408	1227	130	1356	35.0	1	True	ATTAAA	-17
PB.5115.13	chr17	+	1728	11	full-splice_match	LUC7L3	ENST00000240304.5	1972	11	0	244	0	-85	multi-exon	FALSE	canonical	1	639631	junction_10	505973.46267428884	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	131	1429	25.0	0	True	AAGAAA	-8
PB.5115.12	chr17	+	3322	10	full-splice_match	LUC7L3	ENST00000505658.5	7040	10	59	3659	0	4	multi-exon	FALSE	canonical	1	1154226	junction_1	381832.49189286015	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	131	1429	25.0	0	True	ATTAAA	-23
PB.5115.11	chr17	+	3442	11	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	142956	junction_10	723954.1501471002	NA	2	NA	TRUE	NA	NA	NA	C	coding	387	1164	131	1294	35.0	0	True	ATTAAA	-17
PB.5115.10	chr17	+	3600	11	novel_in_catalog	LUC7L3	novel	7040	10	NA	NA	0	54	intron_retention	FALSE	canonical	1	96147	junction_3	756407.1651137633	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	552	1622	25.0	0	True	AATAAA	-20
PB.11175.2	chr8	-	1824	4	incomplete-splice_match	SLCO5A1	ENST00000260126.8	9076	10	11	88507	11	5811	3prime_fragment	FALSE	canonical	1	6521	junction_3	10055.670848940026	NA	0	NA	TRUE	NA	NA	NA	B	coding	376	1128	697	1824	85.0	-76	False	AAAAAG	-16
PB.1111.5	chr1	-	1827	8	novel_not_in_catalog	TMEM206	novel	2475	8	NA	NA	-20	-6	any annotated donor/acceptor	FALSE	canonical	1	4575	junction_7	70534.66782616147	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	273	1094	50.0	-36	True	AATAAA	-10
PB.7359.7	chr20	-	5788	10	full-splice_match	NFATC2	ENST00000396009.7	7437	10	-21	1670	-21	-1	multi-exon	FALSE	canonical	1	21370	junction_9	31677.434706042022	NA	4	NA	TRUE	NA	NA	NA	C	coding	925	2778	242	3019	15.0	-42	True	ATTAAA	-19
PB.6327.4	chr2	+	3284	14	full-splice_match	GEN1	ENST00000381254.6	6367	14	-46	3129	-46	1466	multi-exon	FALSE	canonical	1	18902	junction_1	29853.64133578879	NA	1	1	TRUE	NA	NA	NA	C	coding	908	2727	261	2987	15.0	2	True	AGTAAA	-19
PB.7359.6	chr20	-	6230	10	novel_not_in_catalog	NFATC2	novel	7525	11	NA	NA	16678	747	any annotated donor/acceptor	FALSE	canonical	1	714	junction_9	35470.329422744646	NA	2	NA	TRUE	NA	NA	NA	C	coding	796	2391	323	2713	95.0	6919	False	NA	NA
PB.11071.6	chr8	+	2055	4	full-splice_match	LEPROTL1	ENST00000321250.12	3173	4	22	1096	0	-572	multi-exon	FALSE	canonical	1	481401	junction_1	57114.59229965277	NA	0	NA	TRUE	NA	NA	NA	C	coding	131	396	94	489	45.0	0	True	CATAAA	-21
PB.1111.3	chr1	-	2117	9	full-splice_match	TMEM206	ENST00000535273.2	2119	9	-4	6	-4	-6	multi-exon	FALSE	canonical	1	3120	junction_8	84036.33529015887	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	149	1384	50.0	-20	True	AATAAA	-10
PB.10183.15	chr6	-	2768	1	novel_in_catalog	GOPC	novel	4590	8	NA	NA	28	-39461	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	117	354	213	566	15.0	-9	True	ATTAAA	-18
PB.10183.14	chr6	-	4711	1	novel_in_catalog	GOPC	novel	4590	8	NA	NA	5	-37541	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	6	NA	NA	NA	NA	NA	C	coding	117	354	236	589	30.0	18	False	NA	NA
PB.10183.13	chr6	-	6230	1	novel_in_catalog	GOPC	novel	4590	8	NA	NA	30	-35997	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	117	354	211	564	80.0	-7	True	NA	NA
PB.10183.12	chr6	-	6446	1	novel_in_catalog	GOPC	novel	4590	8	NA	NA	5	-35806	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	117	354	236	589	85.0	18	False	NA	NA
PB.10183.11	chr6	-	4225	2	novel_in_catalog	GOPC	novel	4450	9	NA	NA	29	-15064	intron_retention	FALSE	canonical	1	366565	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	212	745	80.0	-8	True	ATTAAA	-43
PB.10183.10	chr6	-	1612	8	full-splice_match	GOPC	ENST00000052569.10	4590	8	13	2965	13	-2962	multi-exon	FALSE	canonical	1	265041	junction_6	34148.87864654309	NA	0	NA	TRUE	NA	NA	NA	C	coding	454	1365	228	1592	35.0	-24	True	ATTAAA	-20
PB.8171.14	chr3	-	2994	18	novel_not_in_catalog	PBRM1	novel	7523	28	NA	NA	-19	5550	any annotated donor/acceptor	FALSE	canonical	1	4200	junction_13	81580.22740153286	NA	0	NA	TRUE	NA	NA	NA	B	coding	930	2790	204	2993	55.0	-24	True	NA	NA
PB.8171.15	chr3	-	2927	18	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	13	5542	combination_of_known_junctions	FALSE	canonical	1	44547	junction_17	61171.63168012036	NA	0	NA	TRUE	NA	NA	NA	B	coding	918	2754	172	2925	75.0	8	True	NA	NA
PB.8171.16	chr3	-	3192	20	novel_not_in_catalog	PBRM1	novel	7523	28	NA	NA	13	5542	any annotated donor/acceptor	FALSE	canonical	1	1154	junction_17	94243.61206711606	NA	1	NA	TRUE	NA	NA	NA	B	coding	938	2814	377	3190	75.0	8	True	NA	NA
PB.8171.17	chr3	-	3094	19	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-34	5542	combination_of_known_junctions	FALSE	canonical	1	5071	junction_18	77191.80848038361	NA	0	NA	TRUE	NA	NA	NA	B	coding	918	2754	339	3092	75.0	-55	True	NA	NA
PB.8171.11	chr3	-	5193	29	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-41	-3	combination_of_known_junctions	FALSE	canonical	1	44547	junction_28	62291.45719940664	NA	1	1	TRUE	NA	NA	NA	B	coding	1582	4749	226	4974	25.0	-46	True	AATACA	-16
PB.8171.12	chr3	-	3601	21	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	44547	junction_20	58472.25006297859	NA	1	NA	TRUE	NA	NA	NA	B	coding	1127	3381	220	3600	50.0	-40	True	AATACA	-44
PB.8171.13	chr3	-	3114	19	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-24	5550	combination_of_known_junctions	FALSE	canonical	1	13360	junction_18	75913.71644981045	NA	0	NA	TRUE	NA	NA	NA	B	coding	921	2763	351	3113	55.0	-29	True	NA	NA
PB.8171.18	chr3	-	3031	18	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-45	5542	combination_of_known_junctions	FALSE	canonical	1	8532	junction_8	92164.23243706206	NA	0	NA	TRUE	NA	NA	NA	B	coding	886	2658	372	3029	75.0	-50	True	NA	NA
PB.8171.19	chr3	-	3015	19	novel_in_catalog	PBRM1	novel	7523	28	NA	NA	-30	5542	combination_of_known_junctions	FALSE	canonical	1	18119	junction_4	89604.2822366146	NA	3	NA	TRUE	NA	NA	NA	B	coding	933	2799	215	3013	75.0	-35	True	NA	NA
PB.2182.2	chr11	-	3960	15	full-splice_match	PAK1	ENST00000356341.7	3737	15	-77	-146	-77	146	multi-exon	FALSE	canonical	1	120202	junction_14	180338.36753555178	NA	89	2	TRUE	NA	NA	NA	C	coding	545	1638	610	2247	35.0	211	False	NA	NA
PB.2182.3	chr11	-	3643	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-41	156	combination_of_known_junctions	FALSE	canonical	1	53110	junction_2	248441.30328322356	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	234	1895	10.0	-34	True	NA	NA
PB.2182.1	chr11	-	3527	15	novel_in_catalog	PAK1	novel	3737	15	NA	NA	9	150	combination_of_known_junctions	FALSE	canonical	1	289186	junction_14	147292.42970917636	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	173	1810	30.0	27	True	NA	NA
PB.2182.6	chr11	-	4283	16	novel_not_in_catalog	PAK1	novel	3737	15	NA	NA	-98	1	any annotated donor/acceptor	TRUE	canonical	1	1619	junction_10	279500.05266376765	NA	3	NA	TRUE	NA	NA	NA	C	coding	349	1050	1976	3025	15.0	-10	True	AATAAA	-19
PB.2182.7	chr11	-	2945	15	full-splice_match	PAK1	ENST00000356341.7	3737	15	473	319	-94	-9	multi-exon	FALSE	canonical	1	120202	junction_14	180338.36753555178	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	60	1697	40.0	-6	True	AATAAA	-9
PB.2182.4	chr11	-	3629	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-15	150	combination_of_known_junctions	FALSE	canonical	1	10038	junction_15	250556.39969960187	NA	3	NA	TRUE	NA	NA	NA	C	coding	545	1638	275	1912	30.0	-8	True	NA	NA
PB.2182.5	chr11	-	3085	15	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	1	289186	junction_14	147292.42970917636	NA	0	NA	TRUE	NA	NA	NA	C	coding	545	1638	200	1837	40.0	0	True	AATAAA	-9
PB.2182.8	chr11	-	3153	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	-8	-9	combination_of_known_junctions	FALSE	canonical	1	10038	junction_15	250556.39969960187	NA	4	NA	TRUE	NA	NA	NA	C	coding	545	1638	268	1905	40.0	-1	True	AATAAA	-9
PB.2182.9	chr11	-	3249	16	novel_in_catalog	PAK1	novel	3737	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	53110	junction_2	248441.30328322356	NA	0	NA	TRUE	NA	NA	NA	C	coding	553	1662	306	1967	15.0	-31	False	AATAAA	-18
PB.236.1	chr1	+	3558	18	incomplete-splice_match	PTPRU	ENST00000373779.7	5579	30	47173	1	-34	-1	5prime_fragment	FALSE	canonical	1	98222	junction_3	34981.284502224975	NA	0	NA	TRUE	NA	NA	NA	A	coding	692	2079	342	2420	20.0	-40	False	NA	NA
PB.8617.8	chr3	-	2961	10	novel_not_in_catalog	PCYT1A	novel	724	6	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	11487	junction_1	153815.364036654	NA	1	NA	TRUE	NA	NA	NA	C	coding	367	1104	123	1226	15.0	-49	True	AATAAA	-18
PB.747.6	chr1	-	3591	11	full-splice_match	RFX5	ENST00000290524.8	3576	11	-24	9	17	-9	multi-exon	FALSE	canonical	1	79509	junction_9	133347.52990846886	NA	26	NA	TRUE	NA	NA	NA	C	coding	616	1851	204	2054	25.0	-28	True	NA	NA
PB.627.21	chr1	-	2728	19	novel_not_in_catalog	PTPN22	novel	1794	8	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	27	junction_13	42487.541678323585	NA	10	NA	TRUE	NA	NA	NA	C	coding	551	1656	824	2479	20.0	-34	True	AATAAA	-26
PB.10766.22	chr7	-	1784	3	incomplete-splice_match	LHFPL3-AS1	ENST00000434579.6	1034	5	-15	2062	-15	815	3prime_fragment	FALSE	canonical	1	21929	junction_2	10814.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-24	True	AAAAAG	-26
PB.747.7	chr1	-	3667	11	novel_not_in_catalog	RFX5	novel	3576	11	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	192076.747981113	NA	20	2	TRUE	NA	NA	NA	C	coding	445	1338	785	2122	5.0	-7	True	NA	NA
PB.9419.2	chr5	-	2621	18	full-splice_match	ALDH7A1	ENST00000409134.7	4964	18	199	2144	0	13	multi-exon	FALSE	canonical	1	41359	junction_11	51639.145729320306	NA	0	NA	TRUE	NA	NA	NA	C	coding	539	1620	22	1641	100.0	-1	True	NA	NA
PB.9419.3	chr5	-	2467	18	full-splice_match	ALDH7A1	ENST00000409134.7	4964	18	199	2298	0	11	multi-exon	FALSE	canonical	1	41359	junction_11	51639.145729320306	NA	20	3	TRUE	NA	NA	NA	C	coding	539	1620	22	1641	65.0	-1	True	NA	NA
PB.9419.1	chr5	-	3374	18	full-splice_match	ALDH7A1	ENST00000409134.7	4964	18	199	1391	0	766	multi-exon	FALSE	canonical	1	41359	junction_11	51639.145729320306	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	22	1641	10.0	-1	True	ATTAAA	-13
PB.6235.2	chr19	+	6172	4	full-splice_match	ZNF805	ENST00000414468.2	1884	4	-245	-4043	-38	3611	multi-exon	FALSE	canonical	1	42281	junction_1	2648.2579599091596	NA	2	NA	TRUE	NA	NA	NA	C	coding	625	1878	252	2129	25.0	15	True	NA	NA
PB.6235.1	chr19	+	2610	4	full-splice_match	ZNF805	ENST00000414468.2	1884	4	-274	-452	-67	20	multi-exon	FALSE	canonical	1	42281	junction_1	2648.2579599091596	NA	0	NA	TRUE	NA	NA	NA	C	coding	625	1878	281	2158	20.0	-14	True	ATTAAA	-37
PB.6909.1	chr2	+	3837	14	incomplete-splice_match	GLS	ENST00000338435.8	4475	15	14318	1	-500	-1	5prime_fragment	FALSE	canonical	1	538758	junction_2	223074.11179061455	NA	0	NA	TRUE	NA	NA	NA	C	coding	420	1263	149	1411	10.0	2970	False	AATAAA	-15
PB.6909.3	chr2	+	3569	12	incomplete-splice_match	GLS	ENST00000338435.8	4475	15	19779	1	-51	-1	5prime_fragment	FALSE	canonical	1	608997	junction_11	186927.9626629529	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	19	1143	10.0	8431	False	AATAAA	-15
PB.47.1	chr1	-	3258	4	novel_not_in_catalog	C1orf174	novel	2517	5	NA	NA	-3	-14	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	189394.95807615013	NA	1	NA	TRUE	NA	NA	NA	C	coding	88	267	111	377	45.0	-39	True	AATAAA	-11
PB.6909.6	chr2	+	3246	8	novel_in_catalog	GLS	novel	4834	18	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	52423	junction_7	365602.0683392237	NA	2	NA	TRUE	NA	NA	NA	C	coding	201	606	39	644	10.0	-7896	False	AATAAA	-15
PB.10713.2	chr7	+	2008	4	full-splice_match	ZSCAN21	ENST00000292450.8	2005	4	-1	-2	-1	0	multi-exon	FALSE	canonical	1	35032	junction_1	37257.29572401447	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	187	1587	30.0	-1	True	AATAAA	-16
PB.10713.3	chr7	+	2140	5	novel_in_catalog	ZSCAN21	novel	2005	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	3071	junction_1	49557.86568434419	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	319	1719	30.0	0	True	AATAAA	-16
PB.10713.1	chr7	+	2173	5	novel_not_in_catalog	ZSCAN21	novel	2005	4	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1008	junction_1	55627.36591148281	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	353	1753	30.0	-1	True	AATAAA	-15
PB.7062.2	chr2	-	2804	2	incomplete-splice_match	SPATA3-AS1	ENST00000414876.5	3508	6	8846	-859	8696	859	5prime_fragment	FALSE	canonical	1	4873	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	79	240	186	425	30.0	8843	False	CATAAA	-14
PB.10713.4	chr7	+	2324	6	novel_not_in_catalog	ZSCAN21	novel	2005	4	NA	NA	-1	0	intron_retention	FALSE	canonical	1	3015	junction_1	50799.525035574894	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	504	1904	30.0	4	True	AATAAA	-15
PB.7062.1	chr2	-	4622	2	incomplete-splice_match	SPATA3-AS1	ENST00000414876.5	3508	6	8892	-2723	8742	2723	5prime_fragment	FALSE	canonical	1	4873	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	coding	79	240	140	379	50.0	8889	False	NA	NA
PB.10400.1	chr7	+	1779	4	full-splice_match	C1GALT1	ENST00000436587.6	6235	4	-83	4539	-15	-4539	multi-exon	FALSE	canonical	1	124257	junction_2	17387.995533317426	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	307	1398	65.0	-12	True	AATAAA	-13
PB.3681.14	chr14	+	3707	11	novel_in_catalog	EIF5	novel	521	3	NA	NA	1	-6	intron_retention	FALSE	canonical	1	2227	junction_1	742645.1605831751	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	242	1537	35.0	-1965	False	ATTAAA	-28
PB.10400.2	chr7	+	6173	4	full-splice_match	C1GALT1	ENST00000436587.6	6235	4	35	27	20	-27	multi-exon	FALSE	canonical	1	124257	junction_2	17387.995533317426	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	189	1280	25.0	-9	True	AATAAA	-19
PB.3681.11	chr14	+	2169	11	novel_in_catalog	EIF5	novel	521	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	259288	junction_5	573472.8894275735	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	570	1865	20.0	0	True	AATAAA	-20
PB.3681.10	chr14	+	3983	11	novel_in_catalog	EIF5	novel	521	3	NA	NA	0	-58	intron_retention	FALSE	canonical	1	259288	junction_5	573472.8894275735	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	570	1865	20.0	0	True	ATTAAA	-17
PB.3681.13	chr14	+	2355	11	novel_in_catalog	EIF5	novel	521	3	NA	NA	6	-501	combination_of_known_junctions	FALSE	canonical	1	19685	junction_1	739178.956427799	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	227	1522	40.0	6	True	AATAAA	-18
PB.3631.9	chr14	+	3320	10	novel_in_catalog	AL110118.2	novel	543	4	NA	NA	22266	10608	no_combination_of_known_junctions	FALSE	canonical	1	4576	junction_7	129255.94071262711	NA	0	NA	TRUE	NA	NA	NA	B	coding	375	1128	34	1161	70.0	-11	True	NA	NA
PB.10400.9	chr7	+	5588	4	full-splice_match	C1GALT1	ENST00000436587.6	6235	4	16	631	1	-631	multi-exon	FALSE	canonical	1	124257	junction_2	17387.995533317426	NA	0	NA	TRUE	NA	NA	NA	C	coding	363	1092	208	1299	80.0	-28	True	ATTAAA	-42
PB.10400.8	chr7	+	6390	5	novel_not_in_catalog	C1GALT1	novel	802	4	NA	NA	0	-28	any annotated donor/acceptor	FALSE	canonical	1	19892	junction_1	54241.49675525188	NA	1	NA	TRUE	NA	NA	NA	C	coding	363	1092	407	1498	20.0	-29	True	AATAAA	-18
PB.7123.2	chr20	+	1809	3	full-splice_match	NRSN2	ENST00000492242.5	846	3	224	-1187	2	-1	multi-exon	FALSE	canonical	1	29666	junction_2	43883.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-10	True	AATAAA	-19
PB.7123.3	chr20	+	2075	5	full-splice_match	NRSN2	ENST00000382285.6	1047	5	6	-1034	6	2	multi-exon	FALSE	canonical	1	5731	junction_2	140548.57656941068	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	236	847	10.0	-6	True	AATAAA	-15
PB.7123.1	chr20	+	2009	4	full-splice_match	NRSN2	ENST00000382291.7	2088	4	78	1	-3	-1	multi-exon	FALSE	canonical	1	117433	junction_1	82435.31237414111	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	166	777	5.0	-15	True	AATAAA	-19
PB.8580.11	chr3	-	1618	9	full-splice_match	TRA2B	ENST00000453386.6	2952	9	116	1218	4	31	multi-exon	FALSE	canonical	1	1160323	junction_8	622999.843642223	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	161	1027	20.0	-7	True	AATACA	-19
PB.6266.4	chr19	+	3383	8	novel_not_in_catalog	ZNF544	novel	3587	7	NA	NA	0	-5	any annotated donor/acceptor	FALSE	canonical	1	6136	junction_3	125862.8727622216	NA	2	NA	TRUE	NA	NA	NA	C	coding	715	2148	351	2498	35.0	0	True	NA	NA
PB.6599.2	chr2	-	2706	4	full-splice_match	C2orf68	ENST00000306336.5	2837	4	-15	146	-12	-146	multi-exon	FALSE	canonical	1	205381	junction_2	84144.29331808545	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	61	561	90.0	-13	True	NA	NA
PB.8904.18	chr4	-	2185	8	full-splice_match	UBE2D3	ENST00000394801.8	2368	8	187	-4	51	4	multi-exon	FALSE	canonical	1	151175	junction_6	393001.72078711394	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	299	742	20.0	1	True	AATAAA	-21
PB.9802.1	chr6	+	3802	1	full-splice_match	HCG11	ENST00000411553.3	5696	1	126	1768	126	-1768	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	116	351	108	458	100.0	106	False	NA	NA
PB.7809.2	chr22	+	2059	5	full-splice_match	RBX1	ENST00000216225.8	1188	5	13	-884	13	884	multi-exon	FALSE	canonical	1	2397355	junction_2	258537.47461538337	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	28	354	15.0	-6	True	NA	NA
PB.7809.1	chr22	+	540	5	full-splice_match	RBX1	ENST00000216225.8	1188	5	1	647	1	0	multi-exon	FALSE	canonical	1	2397355	junction_2	258537.47461538337	NA	0	NA	TRUE	NA	NA	NA	C	coding	108	327	40	366	15.0	-9746	False	AATAAA	-18
PB.11263.9	chr8	-	2525	11	novel_not_in_catalog	STK3	novel	594	4	NA	NA	-5	-13338	any annotated donor/acceptor	FALSE	canonical	1	2222	junction_1	69424.25365101162	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	137	1669	35.0	-6	True	ATTAAA	-14
PB.11263.8	chr8	-	2468	11	full-splice_match	STK3	ENST00000419617.6	2826	11	-51	409	-51	-347	multi-exon	FALSE	canonical	1	124301	junction_10	40469.9364200143	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	193	1668	25.0	-62	False	AATAAA	-16
PB.8826.11	chr4	+	2044	17	incomplete-splice_match	USO1	ENST00000514213.6	4034	24	88	13094	83	-5436	3prime_fragment	FALSE	canonical	0	0	junction_1	314870.3542871852	NA	0	NA	TRUE	NA	NA	NA	C	coding	635	1905	140	2044	65.0	14	True	NA	NA
PB.8826.10	chr4	+	3897	24	full-splice_match	USO1	ENST00000514213.6	4034	24	70	67	65	-67	multi-exon	FALSE	canonical	0	0	junction_1	316182.78788999625	NA	0	NA	TRUE	NA	NA	NA	C	coding	962	2889	158	3046	60.0	-4	True	AATAGA	-5
PB.8480.4	chr3	+	2815	22	novel_in_catalog	MME	novel	2854	23	NA	NA	9	223	no_combination_of_known_junctions	FALSE	canonical	1	4095	junction_3	96809.06102939068	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	112	2202	5.0	0	True	AATGAA	-11
PB.8826.14	chr4	+	3307	18	incomplete-splice_match	USO1	ENST00000514213.6	4034	24	46488	2	958	-2	5prime_fragment	FALSE	canonical	1	530253	junction_6	169430.6373350398	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	16	2391	15.0	NA	False	AATAAA	-18
PB.11263.1	chr8	-	2822	11	full-splice_match	STK3	ENST00000419617.6	2826	11	3	1	3	-1	multi-exon	FALSE	canonical	1	124301	junction_10	40469.9364200143	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	139	1614	15.0	-8	True	AATAAA	-20
PB.11263.3	chr8	-	2711	11	novel_not_in_catalog	STK3	novel	594	4	NA	NA	-45	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	68164.27633746287	NA	1	NA	TRUE	NA	NA	NA	C	coding	418	1257	247	1503	15.0	-56	True	AATAAA	-20
PB.11263.2	chr8	-	2712	10	novel_in_catalog	STK3	novel	594	4	NA	NA	-2	-1	no_combination_of_known_junctions	FALSE	canonical	1	1875	junction_7	73216.8782971539	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	446	1504	15.0	-13	True	AATAAA	-20
PB.11263.5	chr8	-	3124	12	novel_in_catalog	STK3	novel	594	4	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	3291	junction_11	81353.92317887959	NA	0	NA	TRUE	NA	NA	NA	C	coding	576	1731	187	1917	15.0	1593	False	AATAAA	-19
PB.11263.4	chr8	-	2585	9	novel_in_catalog	STK3	novel	594	4	NA	NA	-24	-1	no_combination_of_known_junctions	FALSE	canonical	1	1154	junction_3	60037.03972080485	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	166	1377	15.0	-35	True	AATAAA	-20
PB.11263.7	chr8	-	2646	11	full-splice_match	STK3	ENST00000419617.6	2826	11	-7	187	-7	-125	multi-exon	FALSE	canonical	1	124301	junction_10	40469.9364200143	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	149	1624	75.0	-18	True	AAAACA	-33
PB.8580.12	chr3	-	1886	10	full-splice_match	TRA2B	ENST00000456380.5	1697	10	15	-204	-1	29	multi-exon	FALSE	canonical	1	267715	junction_8	933996.4064105796	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	731	1297	25.0	-1	True	AATACA	-17
PB.5052.1	chr17	+	2730	1	full-splice_match	HEXIM1	ENST00000332499.3	3600	1	70	800	70	-800	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	48	NA	NA	NA	NA	NA	C	coding	359	1080	620	1699	80.0	-5116	False	NA	NA
PB.5052.3	chr17	+	1797	1	full-splice_match	HEXIM1	ENST00000332499.3	3600	1	351	1452	351	-1452	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	359	1080	339	1418	30.0	-4835	False	AATAAA	-19
PB.5052.2	chr17	+	3628	1	full-splice_match	HEXIM1	ENST00000332499.3	3600	1	-27	-1	-27	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	359	1080	717	1796	0.0	0	True	ATTAAA	-18
PB.5052.4	chr17	+	2126	2	antisense	novelGene_AC138150.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	8	1	FALSE	NA	NA	NA	A	coding	359	1080	668	1747	30.0	0	True	AATAAA	-19
PB.2521.22	chr12	+	5306	29	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	0	-634	combination_of_known_junctions	FALSE	canonical	1	82268	junction_11	86509.91113553	NA	0	NA	TRUE	NA	NA	NA	C	coding	990	2973	287	3259	40.0	0	True	ATTAAA	-20
PB.2521.23	chr12	+	5571	25	novel_in_catalog	PPFIBP1	novel	609	5	NA	NA	-19478	0	combination_of_known_junctions	FALSE	canonical	1	104089	junction_4	79435.54387887914	NA	3	NA	TRUE	NA	NA	NA	C	coding	941	2826	65	2890	15.0	NA	False	AATAAA	-20
PB.2521.20	chr12	+	4295	13	novel_not_in_catalog	PPFIBP1	novel	609	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	110030.36377856368	NA	0	NA	TRUE	NA	NA	NA	C	coding	422	1269	346	1614	15.0	0	True	AATAAA	-20
PB.5187.35	chr17	-	2512	14	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	11399	junction_2	2400323.9589381265	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	171	1421	40.0	-1	True	AATAAA	-45
PB.5187.32	chr17	-	5330	3	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	5032484	junction_2	513144.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	126	381	4649	5029	40.0	-1	True	AATAAA	-45
PB.5187.33	chr17	-	2547	14	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	33156	junction_2	2388941.7466393407	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	293	1651	40.0	-1	True	AATAAA	-45
PB.9483.42	chr5	+	3795	15	full-splice_match	MATR3	ENST00000618441.5	4018	15	186	37	-1	-1	multi-exon	FALSE	canonical	1	58261	junction_1	1068305.717375255	NA	1	NA	TRUE	NA	NA	NA	C	coding	847	2544	243	2786	30.0	-10	True	AATAAA	-17
PB.5187.31	chr17	-	2538	12	novel_in_catalog	DDX5	novel	2225	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	3731383	junction_1	986999.8022420192	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	171	1625	40.0	-1	True	AATAAA	-45
PB.854.5	chr1	-	2786	8	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	3	202	any annotated donor/acceptor	FALSE	canonical	1	8097	junction_7	54054.37328377826	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	59	907	25.0	1	True	NA	NA
PB.854.4	chr1	-	2807	9	novel_not_in_catalog	SLAMF6	novel	2743	8	NA	NA	-1	205	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	48817.05105784632	NA	3	1	TRUE	NA	NA	NA	C	coding	332	999	63	1061	30.0	-3	True	NA	NA
PB.854.7	chr1	-	2367	7	full-splice_match	SLAMF6	ENST00000368055.1	730	7	-13	-1624	-2	-14	multi-exon	FALSE	canonical	1	6622	junction_6	54366.71742819007	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	64	729	80.0	-4	True	NA	NA
PB.854.6	chr1	-	2699	8	full-splice_match	SLAMF6	ENST00000368057.7	2712	8	-1	14	-1	-14	multi-exon	FALSE	canonical	1	69640	junction_3	31556.66691809501	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	63	1061	80.0	-3	True	NA	NA
PB.854.1	chr1	-	3049	8	full-splice_match	SLAMF6	ENST00000368059.7	2743	8	2	-308	2	308	multi-exon	FALSE	canonical	1	38209	junction_3	39334.23420235501	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	69	1064	45.0	-9	True	NA	NA
PB.854.3	chr1	-	2967	8	full-splice_match	SLAMF6	ENST00000368057.7	2712	8	-25	-230	-16	205	multi-exon	FALSE	canonical	1	69640	junction_3	31556.66691809501	NA	0	NA	TRUE	NA	NA	NA	C	coding	332	999	87	1085	30.0	-5	True	NA	NA
PB.4080.9	chr15	+	4663	22	novel_in_catalog	BLM	novel	5258	22	NA	NA	-12	93	combination_of_known_junctions	FALSE	canonical	1	932	junction_2	42120.75423283464	NA	1	NA	TRUE	NA	NA	NA	C	coding	1261	3786	703	4488	25.0	19	True	AATAAA	-13
PB.10854.10	chr7	-	2671	2	novel_not_in_catalog	SLC35B4	novel	6797	10	NA	NA	-41	-11419	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	1	1	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-15	True	NA	NA
PB.854.9	chr1	-	4501	5	novel_in_catalog	SLAMF6	novel	2743	8	NA	NA	1	-14	intron_retention	FALSE	canonical	1	104154	junction_4	26797.02320687878	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	61	729	80.0	-1	True	NA	NA
PB.8580.13	chr3	-	1449	9	full-splice_match	TRA2B	ENST00000453386.6	2952	9	97	1406	-10	16	multi-exon	FALSE	canonical	1	1160323	junction_8	622999.843642223	NA	1	NA	TRUE	NA	NA	NA	C	coding	288	867	180	1046	40.0	-26	False	AATAAA	-31
PB.8904.11	chr4	-	2406	8	full-splice_match	UBE2D3	ENST00000453744.6	3990	8	276	1308	-14	285	multi-exon	FALSE	canonical	1	151175	junction_6	493154.7121446674	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	239	682	30.0	647	False	AATAAA	-29
PB.1932.32	chr11	-	3496	15	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	18737	junction_14	232740.7960900552	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	222	1685	85.0	-1	True	AATAAA	-4
PB.1932.33	chr11	-	3465	15	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	5806	junction_13	235116.44880825348	NA	3	NA	TRUE	NA	NA	NA	C	coding	487	1464	191	1654	85.0	-2	True	AATAAA	-4
PB.1932.30	chr11	-	3525	15	novel_not_in_catalog	CELF1	novel	4583	14	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	10365	junction_13	246932.6891067582	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	263	1714	85.0	-3	True	AATAAA	-4
PB.1932.31	chr11	-	3504	13	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	122396	junction_6	197988.59665998162	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	154	1605	85.0	-5	True	AATAAA	-4
PB.9650.19	chr5	-	1767	6	full-splice_match	DOK3	ENST00000510898.6	1775	6	5	3	5	-1	multi-exon	FALSE	canonical	1	37886	junction_5	55158.217214119606	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	213	1535	15.0	-4	True	AATAAA	-35
PB.9650.18	chr5	-	1824	6	novel_in_catalog	DOK3	novel	2292	6	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	1	51499	junction_5	50765.53804856203	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	270	1592	15.0	-11	True	AATAAA	-35
PB.1932.34	chr11	-	3425	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-26	-2	intron_retention	FALSE	canonical	1	122396	junction_7	211412.32090418637	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	163	1614	85.0	-14	True	AATAAA	-4
PB.1932.35	chr11	-	3429	12	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	10905	junction_7	207928.87749607282	NA	0	NA	TRUE	NA	NA	NA	C	coding	287	864	667	1530	85.0	-10	True	AATAAA	-4
PB.9650.15	chr5	-	2201	6	novel_in_catalog	DOK3	novel	2292	6	NA	NA	9	-25	combination_of_known_junctions	FALSE	canonical	1	3113	junction_5	78681.52685249568	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	96	1088	70.0	8	True	NA	NA
PB.9650.14	chr5	-	2371	6	novel_in_catalog	DOK3	novel	2292	6	NA	NA	-22	-25	combination_of_known_junctions	FALSE	canonical	1	20216	junction_1	67469.53772599898	NA	2	NA	TRUE	NA	NA	NA	C	coding	330	993	266	1258	70.0	-7	True	NA	NA
PB.9650.17	chr5	-	2430	5	incomplete-splice_match	DOK3	ENST00000501403.6	1872	6	-33	-33	-30	-1	intron_retention	FALSE	canonical	1	93683	junction_1	34945.88403785916	NA	1	NA	TRUE	NA	NA	NA	C	coding	497	1494	705	2198	15.0	-15	True	AATAAA	-35
PB.1932.39	chr11	-	1906	14	novel_in_catalog	CELF1	novel	4583	14	NA	NA	-45	-2	combination_of_known_junctions	FALSE	canonical	1	32729	junction_1	202343.65517314448	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	182	1642	85.0	-4	True	AATAAA	-4
PB.145.17	chr1	-	3585	13	full-splice_match	HP1BP3	ENST00000312239.9	3938	13	-120	473	-120	1	multi-exon	FALSE	canonical	1	42551	junction_12	372445.7783703686	NA	1	1	TRUE	NA	NA	NA	C	coding	553	1662	261	1922	85.0	498	False	NA	NA
PB.9650.10	chr5	-	3557	7	novel_not_in_catalog	DOK3	novel	2292	6	NA	NA	-16	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	67449.49832034828	NA	2	NA	TRUE	NA	NA	NA	C	coding	287	864	260	1123	70.0	-1	True	NA	NA
PB.9650.12	chr5	-	3168	4	novel_in_catalog	DOK3	novel	2292	6	NA	NA	-40	-25	no_combination_of_known_junctions	FALSE	canonical	1	1143	junction_3	75150.30743043497	NA	2	NA	TRUE	NA	NA	NA	C	coding	295	888	230	1117	70.0	6535	False	NA	NA
PB.404.1	chr1	-	3047	5	full-splice_match	RAB3B	ENST00000371655.3	12844	5	18	9779	18	-9779	multi-exon	FALSE	canonical	1	63508	junction_4	43514.59252365808	NA	1	NA	TRUE	NA	NA	NA	A	coding	219	660	196	855	70.0	17	False	NA	NA
PB.6412.4	chr2	-	6659	35	novel_in_catalog	HEATR5B	novel	433	2	NA	NA	-19	-113	no_combination_of_known_junctions	FALSE	canonical	1	45321	junction_2	49058.49775671213	NA	9	1	TRUE	NA	NA	NA	C	coding	1881	5646	116	5761	30.0	-36	True	AATAAA	-20
PB.8918.1	chr4	+	1832	7	full-splice_match	AIMP1	ENST00000394701.4	2586	7	20	734	20	1	multi-exon	FALSE	canonical	1	529597	junction_1	140124.30655631766	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	22	1032	25.0	10	True	AATAAA	-18
PB.6412.6	chr2	-	3530	11	novel_in_catalog	HEATR5B	novel	6905	36	NA	NA	-6	11934	intron_retention	FALSE	canonical	1	95120	junction_7	26026.677450070343	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	1850	3238	75.0	-23	True	NA	NA
PB.6412.1	chr2	-	6909	36	full-splice_match	HEATR5B	ENST00000233099.5	6905	36	14	-18	14	18	multi-exon	TRUE	canonical	1	55403	junction_32	44576.075279761215	NA	5	1	TRUE	NA	NA	NA	C	coding	2071	6216	83	6298	30.0	-3	True	ATTAAA	-36
PB.6412.2	chr2	-	6831	36	full-splice_match	HEATR5B	ENST00000233099.5	6905	36	-24	98	-24	-98	multi-exon	FALSE	canonical	1	55403	junction_32	44576.075279761215	NA	0	NA	TRUE	NA	NA	NA	C	coding	2071	6216	121	6336	15.0	-41	True	AATAAA	-35
PB.10235.31	chr6	+	4217	9	full-splice_match	TNFAIP3	ENST00000612899.4	4735	9	71	447	45	116	multi-exon	FALSE	canonical	1	73954	junction_1	220346.79284223626	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	300	2672	70.0	0	True	NA	NA
PB.7400.3	chr20	+	2571	12	full-splice_match	SLCO4A1	ENST00000217159.5	2776	12	26	179	26	-38	multi-exon	FALSE	canonical	1	71562	junction_1	45620.126464221576	NA	0	NA	TRUE	NA	NA	NA	C	coding	722	2169	180	2348	40.0	0	True	CATAAA	-27
PB.10235.33	chr6	+	4645	8	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	46	-6	intron_retention	FALSE	canonical	1	18466	junction_1	297011.4776073992	NA	1	NA	TRUE	NA	NA	NA	C	coding	577	1734	926	2659	35.0	1	True	AATAAA	-43
PB.10235.32	chr6	+	2773	4	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	45	-22	intron_retention	FALSE	non_canonical	0	0	junction_1	326805.27799389453	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	435	803	65.0	0	True	AATAAA	-27
PB.10235.35	chr6	+	5518	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	46	-6	intron_retention	FALSE	canonical	1	126053	junction_1	199632.82665433557	NA	7	1	TRUE	NA	NA	NA	C	coding	545	1638	1895	3532	35.0	1	True	AATAAA	-43
PB.10235.34	chr6	+	3386	9	full-splice_match	TNFAIP3	ENST00000612899.4	4735	9	72	1277	46	-714	multi-exon	FALSE	canonical	1	73954	junction_1	220346.79284223626	NA	1	NA	TRUE	NA	NA	NA	C	coding	790	2373	299	2671	20.0	1	True	TTTAAA	-31
PB.10235.37	chr6	+	4555	9	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	49	-22	intron_retention	FALSE	canonical	1	813	junction_4	321843.840206488	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	1104	2585	65.0	4	True	AATAAA	-27
PB.10235.36	chr6	+	2135	2	novel_not_in_catalog	TNFAIP3	novel	4735	9	NA	NA	46	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1	True	AATAAA	-43
PB.10235.39	chr6	+	4265	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	2	-6	intron_retention	FALSE	canonical	1	13462	junction_7	304529.3283253449	NA	2	NA	TRUE	NA	NA	NA	C	coding	689	2070	89	2158	35.0	-9778	False	AATAAA	-43
PB.10235.38	chr6	+	5254	8	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	53	-6	intron_retention	FALSE	canonical	1	126053	junction_1	210050.56521053522	NA	3	NA	TRUE	NA	NA	NA	C	coding	617	1854	1415	3268	35.0	8	True	AATAAA	-43
PB.2252.1	chr11	-	3619	3	novel_not_in_catalog	LINC02552	novel	652	5	NA	NA	-30	8273	any annotated donor/acceptor	FALSE	canonical	1	94	junction_1	842.5	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-1	True	NA	NA
PB.12256.4	chrX	-	4108	25	full-splice_match	SMARCA1	ENST00000371122.8	4099	25	-15	6	-15	-5	multi-exon	FALSE	canonical	1	11596	junction_1	112499.73349051765	NA	1	NA	TRUE	NA	NA	NA	C	coding	1054	3165	146	3310	35.0	-26	False	AATAAA	-13
PB.2631.3	chr12	+	6665	31	novel_not_in_catalog	ESPL1	novel	714	3	NA	NA	172	-2	any annotated donor/acceptor	FALSE	canonical	1	6341	junction_1	52521.18376305148	NA	0	NA	TRUE	NA	NA	NA	C	coding	2120	6363	136	6498	10.0	175	False	AATAAA	-19
PB.12256.6	chrX	-	4045	24	novel_in_catalog	SMARCA1	novel	4291	23	NA	NA	-20	-6	no_combination_of_known_junctions	FALSE	canonical	1	78159	junction_1	110937.63801651949	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	151	3261	40.0	-31	False	AATAAA	-12
PB.12256.7	chrX	-	3736	24	full-splice_match	SMARCA1	ENST00000371123.5	3948	24	-31	243	-16	97	multi-exon	FALSE	canonical	1	103366	junction_12	97202.28383043555	NA	0	NA	TRUE	NA	NA	NA	C	coding	1058	3177	147	3323	5.0	-27	False	ATTAAA	-26
PB.12256.1	chrX	-	3994	25	full-splice_match	SMARCA1	ENST00000371121.4	3564	25	-87	-343	-7	2	multi-exon	FALSE	canonical	1	195420	junction_13	91550.22195479495	NA	0	NA	TRUE	NA	NA	NA	C	coding	1070	3213	123	3335	15.0	-3	True	AATAAA	-21
PB.12256.2	chrX	-	4088	25	novel_in_catalog	SMARCA1	novel	4291	23	NA	NA	-19	1	no_combination_of_known_junctions	FALSE	canonical	1	78159	junction_1	105297.84342262949	NA	0	NA	TRUE	NA	NA	NA	C	coding	1048	3147	150	3296	15.0	-30	False	AATAAA	-20
PB.12256.3	chrX	-	3947	26	novel_not_in_catalog	SMARCA1	novel	4291	23	NA	NA	-9	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_25	121662.1932107029	NA	2	NA	TRUE	NA	NA	NA	C	coding	970	2913	247	3159	25.0	-20	False	AATAAA	-16
PB.955.1	chr1	-	4406	10	novel_not_in_catalog	CRYZL2P-SEC16B	novel	4998	31	NA	NA	42	-77351	any annotated donor/acceptor	FALSE	canonical	1	13584	junction_3	12992.630211103105	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	10	True	NA	NA
PB.955.2	chr1	-	2848	9	novel_in_catalog	CRYZL2P-SEC16B	novel	4998	31	NA	NA	41	-77351	no_combination_of_known_junctions	FALSE	canonical	1	15768	junction_2	12086.99135175913	NA	0	NA	TRUE	NA	NA	NA	B	coding	100	303	607	909	40.0	9	True	NA	NA
PB.12256.8	chrX	-	3838	25	full-splice_match	SMARCA1	ENST00000371121.4	3564	25	-189	-85	-94	85	multi-exon	FALSE	canonical	1	195420	junction_13	91550.22195479495	NA	0	NA	TRUE	NA	NA	NA	C	coding	1070	3213	225	3437	25.0	-105	False	ATTAAA	-14
PB.2631.1	chr12	+	6650	31	full-splice_match	ESPL1	ENST00000257934.8	6623	31	-30	3	-30	2	multi-exon	FALSE	canonical	1	63258	junction_1	48581.773742103	NA	0	NA	TRUE	NA	NA	NA	C	coding	2120	6363	122	6484	10.0	-2	True	AATAAA	-18
PB.6464.3	chr2	-	2029	11	novel_in_catalog	ASB3	novel	2648	10	NA	NA	-26	0	no_combination_of_known_junctions	FALSE	canonical	1	3906	junction_8	100079.5783532285	NA	4	NA	TRUE	NA	NA	NA	C	coding	445	1338	508	1845	100.0	-29	True	NA	NA
PB.3029.1	chr12	-	3221	18	full-splice_match	CHFR	ENST00000450056.6	3250	18	31	-2	6	-1	multi-exon	FALSE	canonical	1	91636	junction_17	80984.26171614669	NA	0	NA	TRUE	NA	NA	NA	C	coding	652	1959	59	2017	0.0	12	True	AATAAA	-22
PB.6464.1	chr2	-	2280	10	full-splice_match	ASB3	ENST00000263634.7	2214	10	-60	-6	7	6	multi-exon	FALSE	canonical	1	117747	junction_9	60054.00488531495	NA	0	NA	TRUE	NA	NA	NA	C	coding	518	1557	196	1752	0.0	-1	True	ATTAAA	-21
PB.5074.2	chr17	+	3036	7	full-splice_match	SP2	ENST00000376741.4	3112	7	74	2	-12	-2	multi-exon	FALSE	canonical	1	172478	junction_1	22799.112621620458	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	85	1905	15.0	-12	True	AATAAA	-26
PB.9224.1	chr5	+	3132	2	full-splice_match	AC008966.1	ENST00000499459.2	3137	2	-24	29	-2	-26	multi-exon	FALSE	canonical	1	39760	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	A	coding	100	303	2139	2441	65.0	-10	True	TTTAAA	-42
PB.5074.5	chr17	+	2551	7	full-splice_match	SP2	ENST00000376741.4	3112	7	86	475	0	-475	multi-exon	FALSE	canonical	1	172478	junction_1	22799.112621620458	NA	1	NA	TRUE	NA	NA	NA	C	coding	606	1821	73	1893	10.0	0	True	TTTAAA	-13
PB.5074.4	chr17	+	3137	8	novel_in_catalog	SP2	novel	265	2	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	16599	junction_1	87978.16629280755	NA	3	NA	TRUE	NA	NA	NA	C	coding	606	1821	186	2006	15.0	0	True	AATAAA	-26
PB.6769.2	chr2	+	2691	2	full-splice_match	TEX41	ENST00000596278.5	669	2	-22	-2000	19	1051	multi-exon	FALSE	canonical	1	286	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	AATAAA	-18
PB.9431.8	chr5	+	2618	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	6	-1	any annotated donor/acceptor	TRUE	canonical	1	5903	junction_6	251768.2580057502	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-3	True	AATAAA	-33
PB.9431.9	chr5	+	3618	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	2	-44	intron_retention	FALSE	canonical	1	301445	junction_1	162468.6682725011	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-32	True	AATAAA	-29
PB.784.1	chr1	-	2689	1	intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	5	True	NA	NA
PB.9431.4	chr5	+	3631	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-35440	-44	intron_retention	FALSE	non_canonical	0	0	junction_1	253549.26007232248	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	1	True	AATAAA	-29
PB.3029.5	chr12	-	3333	19	novel_in_catalog	CHFR	novel	581	6	NA	NA	-4	1	no_combination_of_known_junctions	FALSE	canonical	1	9957	junction_13	100582.71514212126	NA	0	NA	TRUE	NA	NA	NA	C	coding	683	2052	79	2130	0.0	-8	True	AATAAA	-21
PB.9431.6	chr5	+	3895	8	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	2	4	intron_retention	FALSE	canonical	1	3325	junction_3	312189.38402919885	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4	True	AATAAA	-18
PB.9431.7	chr5	+	2089	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	11	4	any annotated donor/acceptor	FALSE	canonical	1	301445	junction_1	162468.6682725011	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-16	True	ATTAAA	-18
PB.9431.1	chr5	+	3735	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-35494	5	intron_retention	FALSE	canonical	1	2882	junction_1	265627.65319672576	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-53	False	AATAAA	-19
PB.9431.2	chr5	+	3776	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-35444	5	intron_retention	FALSE	canonical	1	2065	junction_2	302518.36632201175	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-19
PB.9431.3	chr5	+	4024	9	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-35441	5	intron_retention	FALSE	canonical	1	2202	junction_2	314502.30301541515	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-19
PB.1865.13	chr11	-	3566	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	-13	1135	-13	-813	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	2	NA	TRUE	NA	NA	NA	C	coding	197	594	35	628	15.0	-20	True	AATAAA	-23
PB.1865.12	chr11	-	4504	6	novel_not_in_catalog	LIN7C	novel	4688	5	NA	NA	7	10	any annotated donor/acceptor	FALSE	canonical	1	8522	junction_4	195975.90128237705	NA	4	NA	TRUE	NA	NA	NA	C	coding	2	9	292	300	10.0	4	True	AATAAA	-25
PB.9271.1	chr5	+	4462	9	full-splice_match	OCLN	ENST00000355237.6	6438	9	253	1723	-245	-1723	multi-exon	FALSE	canonical	1	926	junction_5	49967.26545684059	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	184	1752	45.0	-2	True	AATAAA	-18
PB.1865.17	chr11	-	2709	4	novel_in_catalog	LIN7C	novel	4688	5	NA	NA	-11	-2222	intron_retention	FALSE	canonical	1	211872	junction_3	80828.93825989688	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	33	512	35.0	-18	True	AATAAA	-28
PB.3029.7	chr12	-	3068	18	novel_in_catalog	CHFR	novel	581	6	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	4525	junction_13	91349.57252551954	NA	70	6	TRUE	NA	NA	NA	C	coding	610	1833	33	1865	0.0	38	True	AATAAA	-21
PB.1865.15	chr11	-	2954	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	4	1730	0	-1408	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	18	611	20.0	-3	True	TATAAA	-12
PB.1865.14	chr11	-	3078	5	full-splice_match	LIN7C	ENST00000278193.6	4688	5	5	1605	1	-1283	multi-exon	FALSE	canonical	1	211872	junction_4	90576.68268206503	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	17	610	25.0	-2	True	NA	NA
PB.9287.9	chr5	+	3139	25	novel_in_catalog	TNPO1	novel	11183	25	NA	NA	-22	-5	combination_of_known_junctions	FALSE	canonical	1	1604	junction_1	176547.62012902417	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	194	2866	70.0	-6988	False	NA	NA
PB.3029.6	chr12	-	3274	18	full-splice_match	CHFR	ENST00000432561.6	2648	18	-2	-624	-2	1	multi-exon	FALSE	canonical	1	37386	junction_13	87788.18417711	NA	0	NA	TRUE	NA	NA	NA	C	coding	664	1995	77	2071	0.0	-6	True	AATAAA	-21
PB.11686.9	chr9	-	2765	3	incomplete-splice_match	ERP44	ENST00000262455.6	4854	12	34	76212	34	-76212	3prime_fragment	FALSE	canonical	1	491706	junction_1	44365.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	57	174	167	340	80.0	-7	True	NA	NA
PB.9287.8	chr5	+	3036	25	full-splice_match	TNPO1	ENST00000337273.9	11183	25	360	7787	0	-5	multi-exon	FALSE	canonical	1	167413	junction_3	160524.4582500884	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	67	2763	70.0	11	True	NA	NA
PB.9271.4	chr5	+	5612	9	full-splice_match	OCLN	ENST00000396442.6	1748	9	-50	-3814	-50	-619	multi-exon	FALSE	canonical	1	926	junction_5	48148.070117087766	NA	4	NA	TRUE	NA	NA	NA	C	coding	522	1569	230	1798	35.0	-50	False	NA	NA
PB.8589.28	chr3	+	1610	7	full-splice_match	ST6GAL1	ENST00000448044.5	4302	7	0	2692	0	9	multi-exon	FALSE	canonical	1	87733	junction_1	215982.24556482004	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	332	1552	30.0	1	True	ATTAAA	-23
PB.8589.29	chr3	+	4063	7	full-splice_match	ST6GAL1	ENST00000448044.5	4302	7	43	196	43	-194	multi-exon	FALSE	canonical	1	87733	junction_1	215982.24556482004	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	289	1509	5.0	0	True	TTTAAA	-25
PB.9305.14	chr5	-	1520	13	novel_not_in_catalog	WDR41	novel	797	3	NA	NA	-34	-202	any annotated donor/acceptor	FALSE	canonical	1	2186	junction_12	130243.39571921572	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	863	1480	30.0	469	False	ATTAAA	-27
PB.2389.16	chr12	+	3959	8	full-splice_match	ADIPOR2	ENST00000357103.4	4018	8	34	25	34	-25	multi-exon	FALSE	canonical	1	71407	junction_1	138217.8457577688	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	218	1378	70.0	-9	True	NA	NA
PB.2389.15	chr12	+	3600	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	21	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	180227.29216980256	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	231	1391	70.0	-22	True	NA	NA
PB.2389.14	chr12	+	3930	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	18	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	180227.29216980256	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	234	1394	70.0	-25	True	NA	NA
PB.2389.13	chr12	+	4162	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	11	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	194152.7079890981	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	403	1563	25.0	-32	True	AATAAA	-13
PB.2389.12	chr12	+	3636	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	8	-24	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_8	173594.222211914	NA	1	NA	TRUE	NA	NA	NA	C	coding	386	1161	266	1426	70.0	-35	True	NA	NA
PB.2389.11	chr12	+	2136	1	novel_in_catalog	ADIPOR2	novel	484	3	NA	NA	-7	-37901	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	-50	True	NA	NA
PB.2389.10	chr12	+	4130	9	novel_not_in_catalog	ADIPOR2	novel	484	3	NA	NA	-7	0	any annotated donor/acceptor	FALSE	canonical	1	5305	junction_7	206446.6545870567	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	259	1524	10.0	-50	True	AATAAA	-20
PB.12268.3	chrX	+	3097	11	incomplete-splice_match	STK26	ENST00000394334.6	3288	12	292	-1	-51	1	5prime_fragment	FALSE	canonical	1	265021	junction_1	117242.31150808994	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	62	1312	15.0	-51	False	AATAAA	-20
PB.12268.2	chrX	+	3338	13	novel_not_in_catalog	STK26	novel	3288	12	NA	NA	9	0	any annotated donor/acceptor	FALSE	canonical	1	5013	junction_2	198792.26674057057	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	598	1554	10.0	0	True	AATAAA	-19
PB.12268.1	chrX	+	3046	11	full-splice_match	STK26	ENST00000394335.6	3017	11	-29	0	11	0	multi-exon	FALSE	canonical	1	12793	junction_2	185252.77196438925	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	243	1262	10.0	2	True	AATAAA	-19
PB.1490.4	chr10	-	4793	31	full-splice_match	POLR3A	ENST00000372371.7	6640	31	5	1842	5	-1842	multi-exon	FALSE	canonical	1	87360	junction_30	42080.51373366167	NA	0	NA	TRUE	NA	NA	NA	C	coding	1390	4173	134	4306	20.0	-1	True	NA	NA
PB.12268.7	chrX	+	3736	11	novel_in_catalog	STK26	novel	3288	12	NA	NA	3	0	intron_retention	FALSE	canonical	1	101484	junction_1	143805.06278514676	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	251	1330	10.0	-6	True	AATAAA	-19
PB.12268.6	chrX	+	3202	11	novel_in_catalog	STK26	novel	3288	12	NA	NA	-8	0	no_combination_of_known_junctions	FALSE	canonical	1	6124	junction_8	174164.20723814066	NA	0	NA	TRUE	NA	NA	NA	C	coding	318	957	262	1218	10.0	-351	False	AATAAA	-19
PB.12268.5	chrX	+	3128	11	novel_in_catalog	STK26	novel	3288	12	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	1	15142	junction_6	182441.363141257	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	280	1344	10.0	-369	False	AATAAA	-19
PB.12268.4	chrX	+	3189	12	full-splice_match	STK26	ENST00000394334.6	3288	12	99	0	59	0	multi-exon	FALSE	canonical	1	101484	junction_1	144345.22658909732	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	155	1405	10.0	-244	False	AATAAA	-19
PB.9578.1	chr5	-	2505	3	full-splice_match	ATOX1	ENST00000522710.1	591	3	51	-1965	44	-1258	multi-exon	FALSE	canonical	1	1724549	junction_2	126146.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	2	True	NA	NA
PB.12268.9	chrX	+	5442	3	incomplete-splice_match	STK26	ENST00000481105.5	1835	13	-28	14675	9	-14484	intron_retention	FALSE	canonical	1	101484	junction_1	81768.5	NA	6	NA	TRUE	NA	NA	NA	C	coding	109	330	245	574	70.0	0	True	NA	NA
PB.12268.8	chrX	+	3213	11	full-splice_match	STK26	ENST00000354719.10	3179	11	-34	0	3	0	multi-exon	FALSE	canonical	1	9918	junction_9	155846.91525497063	NA	2	NA	TRUE	NA	NA	NA	C	coding	392	1179	251	1429	10.0	-6	True	AATAAA	-19
PB.9271.8	chr5	+	5458	9	full-splice_match	OCLN	ENST00000396442.6	1748	9	-13	-3697	-13	-736	multi-exon	FALSE	canonical	1	926	junction_5	48148.070117087766	NA	4	NA	TRUE	NA	NA	NA	C	coding	522	1569	193	1761	25.0	-13	True	NA	NA
PB.1260.1	chr1	+	2256	3	full-splice_match	PGBD2	ENST00000329291.5	2136	3	-48	-72	-1	72	multi-exon	FALSE	canonical	1	40124	junction_2	5004.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	196	1974	40.0	-157	False	AATAAA	-17
PB.10459.22	chr7	+	2206	16	full-splice_match	TAX1BP1	ENST00000416801.6	2221	16	15	0	-7	0	multi-exon	FALSE	canonical	1	9821	junction_3	399111.273888117	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	399	2171	90.0	-20	True	AATATA	-11
PB.9271.9	chr5	+	4005	9	full-splice_match	OCLN	ENST00000396442.6	1748	9	-11	-2246	-11	1918	multi-exon	FALSE	canonical	1	926	junction_5	48148.070117087766	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	191	1759	65.0	-11	True	TATAAA	-19
PB.638.3	chr1	+	3518	7	full-splice_match	MAB21L3	ENST00000369500.3	3229	7	-292	3	-292	-3	multi-exon	FALSE	canonical	1	5222	junction_1	3399.767720823815	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	558	1646	75.0	0	True	NA	NA
PB.11024.5	chr8	+	3976	21	full-splice_match	CCAR2	ENST00000389279.7	3980	21	-5	9	-5	-6	multi-exon	FALSE	canonical	1	58970	junction_1	174494.85909177954	NA	1	NA	TRUE	NA	NA	NA	C	coding	923	2772	425	3196	50.0	-17	True	AATAAA	-9
PB.8712.8	chr4	+	4588	21	full-splice_match	NCAPG	ENST00000251496.6	4661	21	80	-7	-40	7	multi-exon	FALSE	canonical	1	167764	junction_4	128153.98838740838	NA	0	NA	TRUE	NA	NA	NA	C	coding	1015	3048	97	3144	25.0	-10	True	AATAAA	-18
PB.9496.8	chr5	+	4906	27	full-splice_match	ANKHD1	ENST00000421134.5	4814	27	-17	-75	-17	75	multi-exon	FALSE	canonical	1	111724	junction_11	118829.3595550685	NA	0	NA	TRUE	NA	NA	NA	C	coding	1590	4770	136	4905	65.0	0	True	NA	NA
PB.9287.1	chr5	+	2944	24	novel_in_catalog	TNPO1	novel	11183	25	NA	NA	-3	-5	no_combination_of_known_junctions	FALSE	canonical	1	3774	junction_23	180635.9609680075	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	118	2730	70.0	-3	True	NA	NA
PB.10459.20	chr7	+	2474	18	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	-7	-1	any annotated donor/acceptor	FALSE	canonical	1	5750	junction_17	437087.31204729975	NA	0	NA	TRUE	NA	NA	NA	C	coding	703	2112	116	2227	85.0	-20	True	AATATA	-10
PB.1090.3	chr1	+	3315	13	novel_not_in_catalog	CD46	novel	3371	14	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	12485	junction_12	476747.84299065586	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	169	1302	20.0	-119	False	AATAAA	-22
PB.6770.1	chr2	+	2854	11	full-splice_match	ACVR2A	ENST00000241416.11	5728	11	-9	2883	-9	12	multi-exon	FALSE	canonical	1	54868	junction_7	26130.900449276523	NA	1	NA	TRUE	NA	NA	NA	A	coding	513	1542	646	2187	35.0	-9	True	AATAAA	-17
PB.10459.21	chr7	+	2466	18	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1017	junction_13	474174.3208411539	NA	1	NA	TRUE	NA	NA	NA	C	coding	771	2316	116	2431	90.0	-20	True	AATATA	-11
PB.10459.26	chr7	+	2198	15	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	71980	junction_13	400155.9458878603	NA	0	NA	TRUE	NA	NA	NA	C	coding	682	2049	115	2163	90.0	-19	True	AATATA	-11
PB.9287.2	chr5	+	2937	24	novel_not_in_catalog	TNPO1	novel	11183	25	NA	NA	12	-27	any annotated donor/acceptor	FALSE	canonical	1	255	junction_23	180953.48302367865	NA	1	1	TRUE	NA	NA	NA	C	coding	866	2601	103	2703	50.0	-7123	False	AATAAA	-27
PB.1260.2	chr1	+	3138	3	full-splice_match	PGBD2	ENST00000329291.5	2136	3	-6	-996	-6	-377	multi-exon	FALSE	canonical	1	40124	junction_2	5004.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	154	1932	25.0	2	True	NA	NA
PB.10459.27	chr7	+	2914	17	full-splice_match	TAX1BP1	ENST00000396319.6	2892	17	-25	3	-5	-3	multi-exon	FALSE	canonical	1	242700	junction_14	342112.0649207791	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2370	114	2483	25.0	-18	True	AATAAA	-17
PB.7076.15	chr2	+	3570	27	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	0	-32	combination_of_known_junctions	FALSE	canonical	1	71305	junction_2	97191.63661102831	NA	3	1	TRUE	NA	NA	NA	C	coding	1109	3327	242	3568	55.0	0	True	AGTAAA	-21
PB.10459.24	chr7	+	3009	15	novel_in_catalog	TAX1BP1	novel	641	4	NA	NA	-6	-90	no_combination_of_known_junctions	FALSE	canonical	1	71980	junction_13	400155.9458878603	NA	1	NA	TRUE	NA	NA	NA	C	coding	682	2049	115	2163	35.0	-19	True	ATTAAA	-20
PB.1274.2	chr10	+	2891	12	full-splice_match	NET1	ENST00000355029.8	3402	12	6	505	6	-505	multi-exon	FALSE	canonical	1	121573	junction_1	273030.74703546445	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	137	1927	75.0	0	True	NA	NA
PB.38.22	chr1	+	3681	5	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-198	-1	intron_retention	FALSE	canonical	1	531052	junction_2	23662.537781269362	NA	3	NA	TRUE	NA	NA	NA	C	coding	344	1035	921	1955	5.0	3	True	NA	NA
PB.1090.7	chr1	+	2945	12	full-splice_match	CD46	ENST00000354848.5	3233	12	-3	291	-3	-2	multi-exon	FALSE	canonical	1	996227	junction_3	274260.14181276324	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	160	1314	15.0	-58	True	AATAAA	-24
PB.10459.25	chr7	+	2308	17	novel_not_in_catalog	TAX1BP1	novel	641	4	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	387142.4938464145	NA	1	1	TRUE	NA	NA	NA	C	coding	489	1470	115	1584	90.0	-19	True	AATATA	-11
PB.2768.2	chr12	-	1890	7	novel_not_in_catalog	AC078923.1	novel	748	5	NA	NA	-133455	886	any annotated donor/acceptor	FALSE	canonical	1	957	junction_6	3006.433088672799	NA	5	NA	TRUE	NA	NA	NA	B	coding	145	438	1275	1712	80.0	8954	False	NA	NA
PB.6936.6	chr2	+	2767	7	incomplete-splice_match	SGO2	ENST00000357799.8	4214	9	23	10744	13	2896	3prime_fragment	FALSE	canonical	1	66305	junction_1	26291.358050486644	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2691	76	2766	70.0	-27	True	AATATA	-44
PB.932.3	chr1	-	1235	8	full-splice_match	VAMP4	ENST00000236192.11	5159	8	163	3761	-10	29	multi-exon	FALSE	canonical	1	107019	junction_5	35233.63225611552	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	225	650	40.0	-20	True	AGTAAA	-18
PB.1090.5	chr1	+	3714	11	novel_in_catalog	CD46	novel	3371	14	NA	NA	33	-3	intron_retention	FALSE	canonical	1	996227	junction_3	279834.683591652	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	58	1032	20.0	-8	False	AATAAA	-21
PB.941.4	chr1	-	2117	6	full-splice_match	CENPL	ENST00000367710.7	1771	6	-54	-292	-54	-8	multi-exon	FALSE	canonical	1	38530	junction_5	27735.185335598537	NA	1	NA	TRUE	NA	NA	NA	C	coding	344	1035	193	1227	45.0	681	False	ATTAAA	-11
PB.8241.1	chr3	+	2709	7	novel_in_catalog	CHMP2B	novel	2528	5	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	8259	junction_1	278611.43041200266	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	344	1033	5.0	-49	True	AATAAA	-26
PB.7076.11	chr2	+	5111	30	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	2	-766	combination_of_known_junctions	FALSE	canonical	1	25397	junction_10	108215.07498484771	NA	3	NA	TRUE	NA	NA	NA	C	coding	1293	3882	248	4129	15.0	-6	True	GATAAA	-42
PB.1260.3	chr1	+	2656	3	full-splice_match	PGBD2	ENST00000329291.5	2136	3	22	-542	22	542	multi-exon	FALSE	canonical	1	40124	junction_2	5004.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	126	1904	50.0	30	True	NA	NA
PB.4418.1	chr16	+	2955	16	novel_not_in_catalog	HEATR3	novel	3560	15	NA	NA	-27	-3	any annotated donor/acceptor	TRUE	canonical	1	951	junction_15	72871.33798597819	NA	1	NA	TRUE	NA	NA	NA	C	coding	680	2043	164	2206	35.0	-23	True	AATAAA	-15
PB.1217.10	chr1	-	2092	13	novel_in_catalog	B3GALNT2	novel	2015	12	NA	NA	19	-27	combination_of_known_junctions	FALSE	canonical	1	4942	junction_11	74085.06012737243	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	211	1836	65.0	-11	True	NA	NA
PB.7765.1	chr22	+	3860	16	full-splice_match	MICALL1	ENST00000215957.10	4710	16	36	814	36	-1	multi-exon	TRUE	canonical	1	154554	junction_6	96899.96476357574	NA	1	1	TRUE	NA	NA	NA	A	coding	863	2592	91	2682	10.0	36	True	AATAAA	-19
PB.465.53	chr1	-	1779	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	-2	4899	-2	158	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	118	1281	25.0	0	True	NA	NA
PB.1274.4	chr10	+	3370	12	full-splice_match	NET1	ENST00000355029.8	3402	12	7	25	7	-25	multi-exon	FALSE	canonical	1	121573	junction_1	273030.74703546445	NA	0	NA	TRUE	NA	NA	NA	C	coding	596	1791	136	1926	80.0	1	True	AATAGA	-42
PB.6936.5	chr2	+	4197	9	full-splice_match	SGO2	ENST00000357799.8	4214	9	43	-26	33	26	multi-exon	FALSE	canonical	1	66305	junction_1	34254.16330444374	NA	1	NA	TRUE	NA	NA	NA	C	coding	1265	3798	56	3853	5.0	-7	True	AATAAA	-42
PB.8396.11	chr3	-	4145	9	incomplete-splice_match	PIK3R4	ENST00000356763.7	5015	20	-3	36208	-3	1274	3prime_fragment	FALSE	canonical	1	128251	junction_8	12651.711304701037	NA	0	NA	TRUE	NA	NA	NA	C	coding	799	2400	562	2961	100.0	-10	True	NA	NA
PB.11196.3	chr8	-	2387	4	full-splice_match	PEX2	ENST00000357039.8	4317	4	124	1806	124	870	multi-exon	FALSE	canonical	1	414084	junction_3	42183.25592775724	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	273	1190	35.0	-25	True	AATAAA	-20
PB.1260.4	chr1	+	2023	3	full-splice_match	PGBD2	ENST00000355360.8	2879	3	54	802	7	571	multi-exon	FALSE	canonical	1	13833	junction_2	18150.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	217	1242	15.0	15	True	NA	NA
PB.8241.7	chr3	+	2527	6	full-splice_match	CHMP2B	ENST00000263780.8	2557	6	29	1	5	-1	multi-exon	FALSE	canonical	1	424349	junction_1	103657.37748293654	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	210	851	5.0	2	True	AATAAA	-26
PB.8451.2	chr3	+	3336	3	full-splice_match	C3orf58	ENST00000315691.7	4346	3	1019	-9	-60	1	multi-exon	FALSE	canonical	1	128748	junction_1	22747.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	228	687	123	809	25.0	-541	False	AATAAA	-20
PB.4160.1	chr16	+	1690	1	full-splice_match	FAHD1	ENST00000427358.3	1974	1	278	6	-1	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	C	coding	221	666	21	686	35.0	-6	True	AATAAA	-14
PB.4160.2	chr16	+	1705	3	full-splice_match	FAHD1	ENST00000382666.5	1964	3	249	10	-4	-10	multi-exon	FALSE	canonical	1	5804	junction_1	3614.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	248	747	15	761	45.0	-9	True	AATAAA	-6
PB.11196.6	chr8	-	1510	3	full-splice_match	PEX2	ENST00000522527.5	1627	3	153	-36	112	13	multi-exon	FALSE	canonical	1	65851	junction_2	219589.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	253	1170	20.0	-37	True	GATAAA	-18
PB.4820.3	chr17	-	5282	6	full-splice_match	FAM83G	ENST00000388995.10	5266	6	-20	4	-20	-4	multi-exon	FALSE	canonical	1	30274	junction_5	34447.31488287585	NA	3	NA	TRUE	NA	NA	NA	A	coding	823	2472	245	2716	35.0	8	True	AATAAA	-26
PB.7076.18	chr2	+	5882	29	novel_in_catalog	GIGYF2	novel	766	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	6209	junction_1	105809.35462559875	NA	4	NA	TRUE	NA	NA	NA	C	coding	1299	3900	217	4116	20.0	7	True	AATAAA	-32
PB.8544.4	chr3	+	4030	30	full-splice_match	ATP11B	ENST00000323116.9	7325	30	2	3293	-1	1	multi-exon	FALSE	canonical	1	145463	junction_1	63025.3097420084	NA	0	NA	TRUE	NA	NA	NA	C	coding	1177	3534	259	3792	0.0	-2	True	AATAAA	-19
PB.11293.7	chr8	-	4142	8	novel_not_in_catalog	LRP12	novel	4092	6	NA	NA	-252	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	49033.78353081617	NA	1	1	TRUE	NA	NA	NA	C	coding	904	2715	5	2719	40.0	-19	True	ATTAAA	-22
PB.1260.5	chr1	+	4167	3	full-splice_match	PGBD2	ENST00000329291.5	2136	3	13	-2044	13	671	multi-exon	FALSE	canonical	1	40124	junction_2	5004.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	135	1913	30.0	21	True	NA	NA
PB.5365.2	chr18	+	5304	41	incomplete-splice_match	SMCHD1	ENST00000320876.10	8821	48	126	32728	126	2482	3prime_fragment	FALSE	canonical	1	215152	junction_1	152051.24927651038	NA	0	NA	TRUE	NA	NA	NA	C	coding	1697	5091	213	5303	65.0	-23	True	AAGAAA	-9
PB.7725.2	chr22	-	3635	3	full-splice_match	RTCB	ENST00000463455.1	628	3	3	-3010	3	3010	multi-exon	FALSE	canonical	1	780760	junction_1	38622.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	87	264	90	353	90.0	1	True	NA	NA
PB.423.2	chr1	+	3297	7	novel_in_catalog	LRRC42	novel	2037	9	NA	NA	-14	-3	intron_retention	FALSE	canonical	1	137664	junction_1	123964.2200682878	NA	1	NA	TRUE	NA	NA	NA	C	coding	248	747	226	972	20.0	-14	True	AATAAA	-16
PB.9078.1	chr4	-	2747	9	full-splice_match	AGA	ENST00000264595.6	2107	9	3	-643	3	643	multi-exon	FALSE	canonical	1	166716	junction_3	54626.63028230828	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	126	1166	30.0	-64	False	AATATA	-17
PB.9078.3	chr4	-	1985	9	novel_in_catalog	AGA	novel	2107	9	NA	NA	-1	-7	no_combination_of_known_junctions	FALSE	canonical	1	7188	junction_3	96367.73755775322	NA	1	1	TRUE	NA	NA	NA	C	coding	227	684	36	719	35.0	-1	True	AATAAA	-19
PB.9078.2	chr4	-	2007	9	full-splice_match	AGA	ENST00000264595.6	2107	9	93	7	-1	-7	multi-exon	FALSE	canonical	1	166716	junction_3	54626.63028230828	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	36	1076	35.0	-1	True	AATAAA	-19
PB.9078.5	chr4	-	1651	9	full-splice_match	AGA	ENST00000264595.6	2107	9	91	365	-3	-365	multi-exon	FALSE	canonical	1	166716	junction_3	54626.63028230828	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	38	1078	15.0	-3	True	AATACA	-18
PB.3134.11	chr13	+	4595	5	novel_not_in_catalog	AKAP11	novel	9920	13	NA	NA	35795	-1	any annotated donor/acceptor	FALSE	canonical	1	10	junction_1	120062.20682082893	NA	4	NA	TRUE	NA	NA	NA	B	coding	182	549	9	557	20.0	-5097	False	AATAAA	-17
PB.9298.7	chr5	-	4717	18	full-splice_match	COL4A3BP	ENST00000405807.9	2830	18	67	-1954	-1	545	multi-exon	FALSE	canonical	1	68906	junction_8	76200.44469840905	NA	18	1	TRUE	NA	NA	NA	C	coding	624	1875	428	2302	65.0	-13	True	NA	NA
PB.9078.6	chr4	-	1211	9	full-splice_match	AGA	ENST00000264595.6	2107	9	66	830	-28	-830	multi-exon	FALSE	canonical	1	166716	junction_3	54626.63028230828	NA	0	NA	TRUE	NA	NA	NA	C	coding	346	1041	63	1103	80.0	-1	True	NA	NA
PB.11890.5	chr9	+	3149	14	full-splice_match	WDR5	ENST00000358625.3	3151	14	0	2	0	-2	multi-exon	FALSE	canonical	1	148371	junction_1	140704.4086906386	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	172	1176	30.0	0	True	AATAAA	-17
PB.8582.19	chr3	-	3535	12	novel_in_catalog	ETV5	novel	4111	13	NA	NA	12	439	intron_retention	FALSE	canonical	1	44807	junction_11	69643.86295590938	NA	0	NA	TRUE	NA	NA	NA	C	coding	427	1284	1426	2709	85.0	-12	True	TATAAA	-30
PB.5365.3	chr18	+	6378	48	full-splice_match	SMCHD1	ENST00000320876.10	8821	48	354	2089	354	0	multi-exon	FALSE	canonical	1	215152	junction_1	149349.5625867053	NA	3	NA	TRUE	NA	NA	NA	C	coding	1877	5634	369	6002	30.0	205	False	TATAAA	-22
PB.11303.1	chr8	-	2913	7	full-splice_match	SYBU	ENST00000276646.13	2870	7	-43	0	-43	0	multi-exon	FALSE	canonical	1	28830	junction_6	63053.68488681336	NA	0	NA	TRUE	NA	NA	NA	A	coding	663	1992	202	2193	45.0	3967	False	AATAAA	-41
PB.6083.2	chr19	-	1570	2	full-splice_match	OPA3	ENST00000263275.4	7828	2	-5	6263	-5	340	multi-exon	FALSE	canonical	1	90518	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	61	600	80.0	-9	True	NA	NA
PB.6083.1	chr19	-	1764	3	novel_not_in_catalog	OPA3	novel	2250	2	NA	NA	-5	-2873	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	45259.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	61	600	30.0	-9	True	AATAAA	-17
PB.10533.6	chr7	-	7164	6	novel_in_catalog	TBRG4	novel	2243	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	583406	junction_5	148528.09180703832	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	3693	4148	10.0	-1	True	NA	NA
PB.6300.8	chr2	-	2154	13	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	-15	232	combination_of_known_junctions	FALSE	canonical	1	7843	junction_3	117396.32845408752	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	111	1172	35.0	-41	True	AATAAA	-20
PB.10242.8	chr6	-	2815	19	novel_in_catalog	REPS1	novel	4537	20	NA	NA	29	-2	combination_of_known_junctions	FALSE	canonical	1	3019	junction_13	150535.1952266202	NA	8	1	TRUE	NA	NA	NA	C	coding	428	1287	1328	2614	15.0	5	True	AATAAA	-23
PB.6300.6	chr2	-	2283	14	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	-10	233	combination_of_known_junctions	FALSE	canonical	1	10233	junction_3	113080.29402128748	NA	0	NA	TRUE	NA	NA	NA	C	coding	401	1206	106	1311	35.0	-36	True	AATAAA	-21
PB.6300.7	chr2	-	2143	13	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	9	233	combination_of_known_junctions	FALSE	canonical	1	217	junction_11	105542.09868509421	NA	10	NA	TRUE	NA	NA	NA	C	coding	497	1494	87	1580	35.0	-17	True	AATAAA	-21
PB.6300.4	chr2	-	1986	11	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	12	234	combination_of_known_junctions	FALSE	canonical	1	8322	junction_10	87525.95123413399	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	259	1422	35.0	-14	True	AATAAA	-22
PB.6300.5	chr2	-	4051	12	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	-5	233	intron_retention	FALSE	canonical	1	118112	junction_11	70463.02807656657	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	101	1411	35.0	-31	True	AATAAA	-21
PB.6300.2	chr2	-	3441	10	novel_in_catalog	MBOAT2	novel	7751	13	NA	NA	5	1778	no_combination_of_known_junctions	FALSE	canonical	1	2951	junction_9	87493.84924159589	NA	2	NA	TRUE	NA	NA	NA	C	coding	387	1164	170	1333	95.0	-21	True	NA	NA
PB.6300.3	chr2	-	3221	13	full-splice_match	MBOAT2	ENST00000305997.7	7751	13	115	4415	11	1244	multi-exon	FALSE	canonical	1	118112	junction_12	69981.09664814055	NA	2	NA	TRUE	NA	NA	NA	C	coding	520	1563	85	1647	35.0	-15	True	AATAAA	-18
PB.6300.1	chr2	-	3723	13	full-splice_match	MBOAT2	ENST00000305997.7	7751	13	147	3881	-1	1778	multi-exon	FALSE	canonical	1	118112	junction_12	69981.09664814055	NA	1	NA	TRUE	NA	NA	NA	C	coding	520	1563	53	1615	95.0	17	True	NA	NA
PB.8582.12	chr3	-	4059	13	novel_not_in_catalog	ETV5	novel	4111	13	NA	NA	-10	-11	any annotated donor/acceptor	FALSE	canonical	1	173	junction_12	76414.3372616611	NA	3	NA	TRUE	NA	NA	NA	C	coding	510	1533	207	1739	25.0	-3	True	AATAAA	-22
PB.852.32	chr1	-	4475	33	full-splice_match	COPA	ENST00000241704.7	4789	33	135	179	-6	-98	multi-exon	FALSE	canonical	1	688780	junction_25	317027.8555173607	NA	4	NA	TRUE	NA	NA	NA	C	coding	1224	3675	96	3770	20.0	-19	True	AATAAA	-34
PB.11217.1	chr8	+	1579	7	full-splice_match	CA2	ENST00000285379.9	1717	7	137	1	-14	-1	multi-exon	FALSE	canonical	1	405914	junction_1	123239.93015218999	NA	1	NA	TRUE	NA	NA	NA	A	coding	260	783	94	876	20.0	-2198	False	AATAAA	-43
PB.8105.8	chr3	-	3190	10	novel_not_in_catalog	QRICH1	novel	3549	10	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_9	214272.96352394376	NA	4	1	TRUE	NA	NA	NA	C	coding	776	2331	119	2449	40.0	20	True	NA	NA
PB.11396.1	chr8	+	1849	13	novel_in_catalog	MROH1	novel	3905	31	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	1	20312	junction_12	72757.91323552985	NA	0	NA	TRUE	NA	NA	NA	B	coding	422	1269	240	1508	25.0	NA	False	AATAAA	-12
PB.11646.2	chr9	-	4496	34	novel_in_catalog	IARS	novel	4656	34	NA	NA	2	0	intron_retention	FALSE	canonical	1	444149	junction_33	314866.0136886599	NA	0	NA	TRUE	NA	NA	NA	C	coding	1262	3789	112	3900	40.0	5168	False	AATAAA	-11
PB.11646.3	chr9	-	4360	34	novel_in_catalog	IARS	novel	4656	34	NA	NA	2	-2	intron_retention	FALSE	canonical	1	444149	junction_33	314866.0136886599	NA	2	1	TRUE	NA	NA	NA	C	coding	1262	3789	112	3900	45.0	5168	False	AATAAA	-10
PB.8370.2	chr3	-	2654	2	intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4258	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.11646.7	chr9	-	2038	13	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-2	3	intron_retention	FALSE	non_canonical	0	0	junction_12	490249.9115885452	NA	3	1	TRUE	NA	NA	NA	C	coding	483	1452	122	1573	40.0	-3	True	AATAAA	-15
PB.11646.4	chr9	-	4455	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	-5	3	intron_retention	FALSE	canonical	1	258	junction_13	422512.83597538114	NA	3	NA	TRUE	NA	NA	NA	C	coding	783	2352	103	2454	40.0	-11	True	AATAAA	-15
PB.11646.5	chr9	-	4193	33	novel_in_catalog	IARS	novel	4656	34	NA	NA	0	3	intron_retention	FALSE	canonical	1	26	junction_1	344489.4466738499	NA	2	NA	TRUE	NA	NA	NA	C	coding	1211	3636	93	3728	40.0	-1	True	AATAAA	-15
PB.4925.3	chr17	-	9741	56	full-splice_match	ACACA	ENST00000614428.4	9554	56	-189	2	-184	-2	multi-exon	FALSE	canonical	0	0	junction_55	72302.77975392186	NA	1	NA	TRUE	NA	NA	NA	C	coding	2346	7041	381	7421	30.0	-28	True	AATAAA	-16
PB.4925.2	chr17	-	9619	57	novel_not_in_catalog	ACACA	novel	9961	56	NA	NA	-119	-2	intron_retention	FALSE	non_canonical	0	0	junction_55	78681.84795717697	NA	1	1	TRUE	NA	NA	NA	C	coding	2346	7041	259	7299	30.0	9502	False	AATAAA	-16
PB.4925.5	chr17	-	2389	1	incomplete-splice_match	ACACA	ENST00000616317.4	9961	56	319393	11	1596	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	41	126	185	310	30.0	2646	False	AATAAA	-13
PB.10878.31	chr7	+	2705	9	incomplete-splice_match	LUC7L2	ENST00000354926.8	2645	10	32	4341	28	-3400	3prime_fragment	FALSE	canonical	1	372878	junction_1	298982.502059668	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	323	1330	85.0	-16	True	NA	NA
PB.10878.32	chr7	+	4308	10	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	-1504	-36	intron_retention	FALSE	canonical	1	28483	junction_1	386540.91523666674	NA	2	NA	TRUE	NA	NA	NA	C	coding	339	1020	2514	3533	80.0	-8736	False	TATAAA	-18
PB.4925.6	chr17	-	5551	29	full-splice_match	ACACA	ENST00000613146.4	3974	29	3	-1580	-2	1580	multi-exon	FALSE	canonical	0	0	junction_28	58855.31313742054	NA	1	NA	TRUE	NA	NA	NA	C	coding	1191	3576	194	3769	80.0	-23	True	NA	NA
PB.8610.6	chr3	-	1866	1	novel_in_catalog	PPP1R2	novel	3450	6	NA	NA	9	-12762	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	8	True	NA	NA
PB.8610.4	chr3	-	2481	6	full-splice_match	PPP1R2	ENST00000618156.4	3450	6	90	879	57	-879	multi-exon	FALSE	canonical	1	59148	junction_1	123542.59464751418	NA	1	NA	TRUE	NA	NA	NA	C	coding	205	618	272	889	30.0	4	True	AATAAA	-30
PB.8610.5	chr3	-	1538	6	full-splice_match	PPP1R2	ENST00000618156.4	3450	6	88	1824	55	136	multi-exon	FALSE	canonical	1	59148	junction_1	123542.59464751418	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	274	891	15.0	2	True	AATAAA	-19
PB.8610.2	chr3	-	3315	5	novel_not_in_catalog	PPP1R2	novel	3450	6	NA	NA	9	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	141847.92197103205	NA	12	2	TRUE	NA	NA	NA	C	coding	103	312	320	631	15.0	8	True	AATAAA	-16
PB.4255.6	chr16	-	4963	15	full-splice_match	GSPT1	ENST00000434724.6	7105	15	-37	2179	-37	-2179	multi-exon	FALSE	canonical	1	455664	junction_14	327328.9294228392	NA	4	NA	TRUE	NA	NA	NA	C	coding	637	1914	238	2151	20.0	-6	True	AATAAA	-21
PB.4255.4	chr16	-	4829	16	novel_not_in_catalog	GSPT1	novel	7105	15	NA	NA	-36	-2178	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_15	440401.46321598685	NA	7	NA	TRUE	NA	NA	NA	C	coding	499	1500	517	2016	20.0	-5	True	AATAAA	-22
PB.9042.2	chr4	+	3170	14	novel_in_catalog	TMEM144	novel	575	5	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	14878	junction_2	45531.40938001127	NA	3	NA	TRUE	NA	NA	NA	C	coding	345	1038	374	1411	35.0	1	True	AATAAA	-17
PB.9042.3	chr4	+	2450	13	full-splice_match	TMEM144	ENST00000296529.10	3442	13	201	791	-9	-584	multi-exon	FALSE	canonical	1	54291	junction_5	27109.82339177689	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	320	1357	75.0	-9	True	TTTAAA	-6
PB.8242.15	chr3	+	5749	8	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-25	-585	no_combination_of_known_junctions	FALSE	canonical	1	8369	junction_3	26551.633207770854	NA	6	NA	TRUE	NA	NA	NA	C	coding	916	2751	572	3322	60.0	-17	True	AATAAA	-11
PB.4255.8	chr16	-	2911	16	novel_not_in_catalog	GSPT1	novel	7105	15	NA	NA	-28	472	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	440401.46321598685	NA	11	NA	TRUE	NA	NA	NA	C	coding	602	1809	191	1999	35.0	3	True	AATAAA	-19
PB.8242.13	chr3	+	4734	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-25	1737	-25	-1736	multi-exon	FALSE	canonical	1	8964	junction_3	24771.17667995154	NA	3	NA	TRUE	NA	NA	NA	C	coding	1128	3387	72	3458	20.0	-17	True	AATAAA	-45
PB.8242.12	chr3	+	3890	8	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-31	-2383	no_combination_of_known_junctions	FALSE	canonical	1	3497	junction_4	32048.859206033576	NA	3	NA	TRUE	NA	NA	NA	C	coding	854	2565	697	3261	80.0	-23	True	AATGAA	-20
PB.8242.11	chr3	+	3887	9	full-splice_match	ZNF654	ENST00000636215.1	6446	9	-35	2594	-35	-2593	multi-exon	FALSE	canonical	1	8964	junction_3	24771.17667995154	NA	2	NA	TRUE	NA	NA	NA	C	coding	1128	3387	82	3468	15.0	-27	True	ATTAAA	-23
PB.8242.10	chr3	+	4690	8	incomplete-splice_match	ZNF654	ENST00000636215.1	6446	9	-35	2387	-35	-2386	intron_retention	FALSE	canonical	1	8964	junction_3	25097.91594893074	NA	3	NA	TRUE	NA	NA	NA	C	coding	1151	3456	82	3537	80.0	-27	True	AATGAA	-17
PB.1022.31	chr1	+	5115	32	novel_in_catalog	PTPRC	novel	731	7	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	1	257769	junction_4	352585.275810798	NA	0	NA	TRUE	NA	NA	NA	C	coding	1240	3723	100	3822	35.0	-13	True	AATAAA	-15
PB.656.2	chr1	-	2572	5	full-splice_match	SEC22B	ENST00000578049.3	6922	5	44	4306	44	2087	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	196	591	148	738	15.0	48	True	AATAAA	-18
PB.886.4	chr1	+	2524	8	full-splice_match	UHMK1	ENST00000489294.1	8478	8	-24	5978	14	-422	multi-exon	FALSE	canonical	1	279935	junction_1	89999.36959371051	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	183	1442	65.0	-27	True	NA	NA
PB.10242.7	chr6	-	3070	19	novel_in_catalog	REPS1	novel	4537	20	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	31055	junction_1	124613.95694610388	NA	1	NA	TRUE	NA	NA	NA	C	coding	773	2322	584	2905	15.0	-13	True	AATAAA	-24
PB.11445.11	chr9	+	2274	5	full-splice_match	MLANA	ENST00000381471.1	1000	5	156	-1430	156	-231	multi-exon	FALSE	canonical	1	6584	junction_1	122200.54769926361	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	251	607	60.0	-6535	False	GATAAA	-36
PB.11396.3	chr8	+	5232	43	novel_in_catalog	MROH1	novel	3905	31	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	37	junction_16	88246.9307889487	NA	1	NA	TRUE	NA	NA	NA	B	coding	1641	4926	118	5043	25.0	NA	False	AATAAA	-18
PB.9356.6	chr5	-	4684	19	novel_in_catalog	ERAP1	novel	5495	20	NA	NA	3	-2	intron_retention	FALSE	canonical	1	4353	junction_18	97247.84252665714	NA	2	NA	TRUE	NA	NA	NA	C	coding	753	2262	513	2774	35.0	38	True	AATAAA	-19
PB.9356.7	chr5	-	4680	20	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	-17	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	98333.39065679033	NA	2	NA	TRUE	NA	NA	NA	C	coding	929	2790	134	2923	35.0	5	True	AATAAA	-19
PB.9356.4	chr5	-	4780	19	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	10574	junction_13	125703.14228819637	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	1140	2870	35.0	5	True	AATAAA	-19
PB.9356.5	chr5	-	4739	20	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	-23	-2	intron_retention	FALSE	canonical	0	0	junction_1	98333.39065679033	NA	3	1	TRUE	NA	NA	NA	C	coding	929	2790	140	2929	35.0	-1	True	AATAAA	-19
PB.9356.2	chr5	-	4838	19	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2311	junction_18	97655.25533633895	NA	3	NA	TRUE	NA	NA	NA	C	coding	929	2790	138	2927	30.0	23	True	AATAAA	-20
PB.9356.3	chr5	-	5120	19	full-splice_match	ERAP1	ENST00000443439.6	4805	19	-318	3	-127	-3	multi-exon	FALSE	canonical	1	248175	junction_18	55867.291706400305	NA	3	NA	TRUE	NA	NA	NA	C	coding	929	2790	422	3211	35.0	124	False	AATAAA	-18
PB.9356.1	chr5	-	5327	20	full-splice_match	ERAP1	ENST00000296754.7	5495	20	161	7	-17	-7	multi-exon	FALSE	canonical	1	38216	junction_1	91345.33413674732	NA	0	NA	TRUE	NA	NA	NA	C	coding	936	2811	134	2944	40.0	5	True	AATAAA	-13
PB.8244.19	chr3	-	4365	4	full-splice_match	CGGBP1	ENST00000482016.5	1147	4	66	-3284	46	-118	multi-exon	FALSE	canonical	1	83901	junction_1	227772.1933340903	NA	1	NA	TRUE	NA	NA	NA	C	coding	167	504	519	1022	15.0	65	False	ATTAAA	-14
PB.8244.18	chr3	-	4302	3	novel_not_in_catalog	CGGBP1	novel	4495	3	NA	NA	49	-118	any annotated donor/acceptor	FALSE	canonical	1	431	junction_2	258096.0	NA	8	NA	TRUE	NA	NA	NA	C	coding	167	504	456	959	15.0	-45	True	ATTAAA	-14
PB.4442.5	chr16	+	1729	8	novel_in_catalog	HERPUD1	novel	2946	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	4651	junction_7	541891.5867917433	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	103	1242	20.0	1	True	AATAAA	-21
PB.1051.61	chr1	+	3657	12	incomplete-splice_match	ZC3H11A	ENST00000640465.1	4365	17	14874	-6	508	0	5prime_fragment	FALSE	canonical	1	102289	junction_1	195449.92061644644	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	172	1932	25.0	-3859	False	AATAAA	-18
PB.1245.11	chr1	-	6390	33	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	-2	10903	-2	-144	3prime_fragment	FALSE	canonical	1	25	junction_17	22743.988367099853	NA	0	NA	TRUE	NA	NA	NA	C	coding	1997	5991	400	6390	50.0	20	False	NA	NA
PB.9356.8	chr5	-	4644	20	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	-23	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	98333.39065679033	NA	2	NA	TRUE	NA	NA	NA	C	coding	929	2790	140	2929	35.0	-1	True	AATAAA	-19
PB.9356.9	chr5	-	4623	20	novel_not_in_catalog	ERAP1	novel	5495	20	NA	NA	-23	-2	intron_retention	FALSE	canonical	0	0	junction_1	123229.42071107331	NA	8	1	TRUE	NA	NA	NA	C	coding	753	2262	552	2813	35.0	-1	True	AATAAA	-19
PB.2084.1	chr11	-	1426	10	full-splice_match	BRMS1	ENST00000359957.7	1445	10	24	-5	-12	-1	multi-exon	FALSE	canonical	1	482809	junction_9	129927.67348456259	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	138	878	0.0	-1	True	ATTAAA	-19
PB.6573.3	chr2	-	1807	10	novel_in_catalog	AUP1	novel	1581	12	NA	NA	4	-1	intron_retention	FALSE	canonical	1	228848	junction_2	616455.6997037255	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	65	514	5.0	4	True	ATTAAA	-22
PB.2084.2	chr11	-	1858	9	full-splice_match	BRMS1	ENST00000530238.5	1817	9	-12	-29	-12	-1	multi-exon	FALSE	canonical	1	482809	junction_8	137249.95474173888	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	138	1058	5.0	-1	True	ATTAAA	-13
PB.6573.6	chr2	-	2865	3	novel_in_catalog	AUP1	novel	1581	12	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1153914	junction_2	425289.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	81	246	353	598	5.0	-1	True	ATTAAA	-21
PB.6573.7	chr2	-	2477	6	novel_in_catalog	AUP1	novel	1581	12	NA	NA	22	-2	intron_retention	FALSE	canonical	1	1153914	junction_5	470491.5584415941	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	18	638	5.0	1217	False	ATTAAA	-21
PB.6573.4	chr2	-	1657	11	full-splice_match	AUP1	ENST00000463900.5	1645	11	-9	-3	-9	-1	multi-exon	FALSE	canonical	1	1153914	junction_10	383185.26447289175	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	661	1506	5.0	-9	True	ATTAAA	-22
PB.6573.5	chr2	-	1452	12	full-splice_match	AUP1	ENST00000377526.3	1695	12	241	2	-1	-2	multi-exon	FALSE	canonical	1	1153914	junction_11	420889.11386191857	NA	0	NA	TRUE	NA	NA	NA	C	coding	410	1233	70	1302	5.0	-1	True	ATTAAA	-21
PB.6828.7	chr2	+	2210	10	novel_in_catalog	GORASP2	novel	812	7	NA	NA	-23	-209	combination_of_known_junctions	FALSE	canonical	1	21105	junction_2	501073.77035909245	NA	0	NA	TRUE	NA	NA	NA	C	coding	384	1155	266	1420	20.0	-42	True	AATAAA	-19
PB.6828.6	chr2	+	1708	10	full-splice_match	GORASP2	ENST00000234160.4	3173	10	690	775	19	-247	multi-exon	FALSE	canonical	1	538771	junction_1	388851.98049903865	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	126	1484	45.0	-56	True	TTTAAA	-6
PB.6573.8	chr2	-	2951	2	incomplete-splice_match	AUP1	ENST00000463900.5	1645	11	-8	-1	-8	1	intron_retention	FALSE	canonical	1	2004493	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-8	True	ATTAAA	-20
PB.6573.9	chr2	-	1708	11	full-splice_match	AUP1	ENST00000466894.5	1658	11	-13	-37	-1	0	multi-exon	FALSE	canonical	1	228848	junction_2	597787.6910999506	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	653	1387	5.0	-1	True	ATTAAA	-19
PB.6828.3	chr2	+	2427	10	full-splice_match	GORASP2	ENST00000234160.4	3173	10	739	7	-2	-7	multi-exon	FALSE	canonical	1	538771	junction_1	388851.98049903865	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	77	1435	50.0	-7	True	ATTAAA	-21
PB.483.4	chr1	-	6471	15	novel_not_in_catalog	AC118549.1	novel	4500	11	NA	NA	6	-43	any annotated donor/acceptor	FALSE	canonical	1	202	junction_14	100867.8903833512	NA	31	2	TRUE	NA	NA	NA	C	coding	903	2712	579	3290	25.0	-16	True	AATAAA	-38
PB.6828.1	chr2	+	2228	10	full-splice_match	GORASP2	ENST00000234160.4	3173	10	737	208	-4	-208	multi-exon	FALSE	canonical	1	538771	junction_1	388851.98049903865	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	79	1437	25.0	-9	True	AATAAA	-20
PB.1245.15	chr1	-	3328	19	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	10	48449	10	-25603	3prime_fragment	FALSE	canonical	1	25	junction_3	26059.129353877095	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	388	2724	25.0	-10	True	AATAAA	-13
PB.1245.14	chr1	-	5085	32	incomplete-splice_match	AHCTF1	ENST00000648844.1	8892	36	11	13843	11	-3084	3prime_fragment	FALSE	canonical	1	25	junction_16	23036.688372093886	NA	0	NA	TRUE	NA	NA	NA	C	coding	1553	4662	387	5048	60.0	-9	True	TATAAA	-26
PB.4241.1	chr16	+	2335	10	novel_in_catalog	NUBP1	novel	582	6	NA	NA	-11	0	intron_retention	TRUE	canonical	1	212190	junction_2	86934.59469659778	NA	1	NA	TRUE	NA	NA	NA	A	coding	169	510	1580	2089	10.0	-12	True	AATAAA	-16
PB.7110.23	chr2	+	3490	15	novel_in_catalog	SEPT2	novel	3701	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	39000	junction_1	1169620.1064842658	NA	2	NA	TRUE	NA	NA	NA	C	coding	361	1086	294	1379	25.0	-19	True	AATAAA	-20
PB.8883.4	chr4	-	1808	6	full-splice_match	SNCA	ENST00000394986.5	1420	6	142	-530	-21	361	multi-exon	FALSE	canonical	1	96737	junction_5	640998.4869789943	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	281	703	45.0	1306	False	AATAAA	-26
PB.12030.8	chrX	-	1374	7	full-splice_match	CXorf38	ENST00000327877.9	2118	7	-20	764	-13	140	multi-exon	FALSE	canonical	1	80554	junction_6	56966.50616346612	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	48	1007	75.0	-11	True	NA	NA
PB.12030.9	chrX	-	1234	7	full-splice_match	CXorf38	ENST00000327877.9	2118	7	-16	900	-9	4	multi-exon	FALSE	canonical	1	80554	junction_6	56966.50616346612	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	44	1003	35.0	-7	True	AATAAA	-22
PB.12030.6	chrX	-	2155	7	full-splice_match	CXorf38	ENST00000327877.9	2118	7	-37	0	-30	0	multi-exon	FALSE	canonical	1	80554	junction_6	56966.50616346612	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	65	1024	80.0	-28	False	NA	NA
PB.12030.7	chrX	-	1968	7	full-splice_match	CXorf38	ENST00000327877.9	2118	7	-14	164	-7	-164	multi-exon	FALSE	canonical	1	80554	junction_6	56966.50616346612	NA	0	NA	TRUE	NA	NA	NA	C	coding	319	960	42	1001	65.0	-5	True	NA	NA
PB.12030.4	chrX	-	2656	7	novel_not_in_catalog	CXorf38	novel	4895	5	NA	NA	-7	-2	any annotated donor/acceptor	FALSE	canonical	1	7327	junction_1	82340.48043489909	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	42	1001	15.0	-5	True	AATAAA	-18
PB.12030.5	chrX	-	2927	7	full-splice_match	CXorf38	ENST00000327877.9	2118	7	-11	-798	-4	798	multi-exon	FALSE	canonical	1	80554	junction_6	56966.50616346612	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	39	998	30.0	-2	True	ATTAAA	-29
PB.12030.2	chrX	-	4228	7	full-splice_match	CXorf38	ENST00000327877.9	2118	7	0	-2110	0	-2	multi-exon	FALSE	canonical	1	80554	junction_6	56966.50616346612	NA	1	NA	TRUE	NA	NA	NA	C	coding	319	960	28	987	15.0	9	True	AATAAA	-18
PB.12030.3	chrX	-	4107	6	novel_in_catalog	CXorf38	novel	4895	5	NA	NA	-7	-2	no_combination_of_known_junctions	FALSE	canonical	1	10910	junction_5	82402.2634820185	NA	2	NA	TRUE	NA	NA	NA	C	coding	274	825	42	866	15.0	-5	True	AATAAA	-18
PB.6099.6	chr19	-	1712	8	full-splice_match	SLC1A5	ENST00000542575.6	2882	8	1167	3	-85	-1	multi-exon	FALSE	canonical	1	1461091	junction_5	210926.5792171411	NA	2	NA	TRUE	NA	NA	NA	C	coding	313	942	147	1088	30.0	1166	False	AATAAA	-18
PB.6099.5	chr19	-	1907	7	full-splice_match	SLC1A5	ENST00000434726.6	1872	7	-36	1	-36	-1	multi-exon	FALSE	canonical	1	7600	junction_6	664985.6302902133	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	264	1283	30.0	3733	False	AATAAA	-18
PB.10506.1	chr7	+	3412	1	antisense	novelGene_PSMA2_AS_novelGene_AC010132.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.6099.3	chr19	-	3251	7	novel_in_catalog	SLC1A5	novel	2882	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1461091	junction_5	210734.69886223192	NA	1	NA	TRUE	NA	NA	NA	C	coding	349	1050	1578	2627	30.0	-1	True	AATAAA	-18
PB.2275.1	chr11	-	2056	16	full-splice_match	PPP2R1B	ENST00000311129.9	2082	16	-20	46	-16	-40	multi-exon	FALSE	canonical	1	44037	junction_1	130023.48480957841	NA	0	NA	TRUE	NA	NA	NA	C	coding	667	2004	42	2045	80.0	297	False	NA	NA
PB.6099.1	chr19	-	2837	7	novel_in_catalog	SLC1A5	novel	2882	8	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	3002	junction_6	666629.585268915	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	1271	2212	30.0	-1	True	AATAAA	-19
PB.4442.7	chr16	+	1868	8	full-splice_match	HERPUD1	ENST00000439977.6	2946	8	96	982	2	0	multi-exon	FALSE	canonical	1	841943	junction_1	421922.9294401855	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	102	1277	20.0	2	True	AATAAA	-22
PB.9257.2	chr5	+	3001	13	full-splice_match	NLN	ENST00000380985.9	8661	13	11	5649	11	306	multi-exon	FALSE	canonical	1	123123	junction_1	53629.4396055909	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	168	2282	25.0	-40	True	NA	NA
PB.9257.3	chr5	+	4028	13	novel_in_catalog	NLN	novel	8661	13	NA	NA	-21	1355	combination_of_known_junctions	FALSE	canonical	1	21033	junction_9	83953.5828839696	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	200	2260	40.0	-111	False	AATAAA	-19
PB.9257.1	chr5	+	2162	12	incomplete-splice_match	NLN	ENST00000380985.9	8661	13	-31	16919	-31	93	3prime_fragment	FALSE	canonical	1	123123	junction_1	55788.74299778341	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1953	210	2162	65.0	-121	False	NA	NA
PB.9257.6	chr5	+	2833	14	novel_in_catalog	NLN	novel	8661	13	NA	NA	2	23	combination_of_known_junctions	FALSE	canonical	1	5353	junction_1	102493.36795834055	NA	0	NA	TRUE	NA	NA	NA	C	coding	681	2046	352	2397	15.0	-49	True	GATAAA	-35
PB.9257.7	chr5	+	6271	13	full-splice_match	NLN	ENST00000380985.9	8661	13	8	2382	8	-2382	multi-exon	FALSE	canonical	1	123123	junction_1	53629.4396055909	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	171	2285	90.0	-43	True	NA	NA
PB.9257.4	chr5	+	2698	13	novel_in_catalog	NLN	novel	8661	13	NA	NA	-21	25	combination_of_known_junctions	FALSE	canonical	1	21033	junction_9	83953.5828839696	NA	3	1	TRUE	NA	NA	NA	C	coding	686	2061	200	2260	20.0	-111	False	GATAAA	-37
PB.9257.5	chr5	+	2541	13	full-splice_match	NLN	ENST00000380985.9	8661	13	-6	6126	-6	-80	multi-exon	FALSE	canonical	1	123123	junction_1	53629.4396055909	NA	0	NA	TRUE	NA	NA	NA	C	coding	704	2115	185	2299	40.0	-96	False	TATAAA	-30
PB.7079.5	chr2	+	3385	28	incomplete-splice_match	DGKD	ENST00000264057.6	6297	30	-4	4952	-4	-2	3prime_fragment	FALSE	canonical	1	129907	junction_1	52135.93355592281	NA	0	NA	TRUE	NA	NA	NA	C	coding	1123	3369	17	3385	75.0	0	True	NA	NA
PB.6378.2	chr2	-	2120	10	novel_not_in_catalog	PPM1G	novel	2311	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	33225	junction_1	700250.47950146	NA	2	NA	TRUE	NA	NA	NA	C	coding	518	1557	161	1717	10.0	-26	True	ACTAAA	-17
PB.6378.1	chr2	-	2203	10	full-splice_match	PPM1G	ENST00000344034.4	2311	10	106	2	-6	-1	multi-exon	FALSE	canonical	1	788155	junction_9	479402.74987911194	NA	1	NA	TRUE	NA	NA	NA	C	coding	546	1641	160	1800	10.0	-25	True	ACTAAA	-17
PB.10237.2	chr6	-	1855	4	novel_not_in_catalog	PERP	novel	4290	3	NA	NA	27	-2285	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	818221.4734900461	NA	2	NA	TRUE	NA	NA	NA	A	coding	125	378	226	603	20.0	-3	True	AATAAA	-11
PB.7079.2	chr2	+	6306	30	full-splice_match	DGKD	ENST00000264057.6	6297	30	-13	4	-13	0	multi-exon	FALSE	canonical	1	129907	junction_1	50680.20051494897	NA	0	NA	TRUE	NA	NA	NA	C	coding	1214	3645	26	3670	20.0	-9	True	AATAAA	-22
PB.7079.3	chr2	+	4277	30	full-splice_match	DGKD	ENST00000264057.6	6297	30	-12	2032	-12	-2028	multi-exon	FALSE	canonical	1	129907	junction_1	50680.20051494897	NA	1	NA	TRUE	NA	NA	NA	C	coding	1214	3645	25	3669	20.0	-8	True	NA	NA
PB.9144.1	chr5	+	1953	11	full-splice_match	CCT5	ENST00000280326.8	3675	11	388	1334	0	0	multi-exon	FALSE	canonical	1	954605	junction_6	880616.0414920682	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	33	1658	15.0	21	True	ATTAAA	-15
PB.9144.3	chr5	+	3291	11	full-splice_match	CCT5	ENST00000280326.8	3675	11	360	24	-28	-24	multi-exon	FALSE	canonical	1	954605	junction_6	880616.0414920682	NA	1	NA	TRUE	NA	NA	NA	C	coding	541	1626	61	1686	15.0	-7	True	AATAAA	-14
PB.9144.2	chr5	+	1445	10	incomplete-splice_match	CCT5	ENST00000280326.8	3675	11	349	3222	27	989	3prime_fragment	FALSE	canonical	1	954605	junction_6	928243.7811159547	NA	4	1	TRUE	NA	NA	NA	C	coding	458	1374	72	1445	25.0	-7949	False	NA	NA
PB.10394.1	chr7	-	2849	15	full-splice_match	DAGLB	ENST00000297056.10	2897	15	49	-1	8	1	multi-exon	FALSE	canonical	1	103735	junction_4	45301.72329610584	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	122	2140	10.0	-10	True	AATAAA	-17
PB.9144.4	chr5	+	2321	1	novel_in_catalog	CCT5	novel	3675	11	NA	NA	-15	-1970	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	6	True	NA	NA
PB.8433.30	chr3	+	4904	7	novel_in_catalog	SLC25A36	novel	4638	7	NA	NA	209	2	combination_of_known_junctions	FALSE	canonical	1	16511	junction_1	152928.4783013143	NA	13	NA	TRUE	NA	NA	NA	C	coding	261	786	637	1422	30.0	292	False	ATTAAA	-12
PB.5859.2	chr19	-	2085	14	full-splice_match	SUGP1	ENST00000247001.9	2423	14	335	3	0	0	multi-exon	FALSE	canonical	1	54916	junction_13	99957.01798924264	NA	0	NA	TRUE	NA	NA	NA	C	coding	641	1926	26	1951	15.0	-1	True	AATAAA	-20
PB.5859.3	chr19	-	4360	12	novel_in_catalog	SUGP1	novel	2066	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	54916	junction_11	98531.01875044224	NA	0	NA	TRUE	NA	NA	NA	C	coding	443	1332	2896	4227	15.0	-1	True	AATAAA	-19
PB.5859.1	chr19	-	4087	13	novel_in_catalog	SUGP1	novel	2066	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	54916	junction_12	95512.26785936396	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	2645	3952	10.0	-1	True	AATAAA	-21
PB.9247.1	chr5	-	2824	12	full-splice_match	DIMT1	ENST00000199320.8	2859	12	39	-4	-3	4	multi-exon	TRUE	canonical	1	369650	junction_11	115947.23704661445	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	123	1064	45.0	7	True	AATAAA	-20
PB.9247.3	chr5	-	2154	12	full-splice_match	DIMT1	ENST00000199320.8	2859	12	6	699	6	-699	multi-exon	FALSE	canonical	1	369650	junction_11	115947.23704661445	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	156	1097	20.0	-26	False	AATAAA	-15
PB.9247.2	chr5	-	2425	12	full-splice_match	DIMT1	ENST00000199320.8	2859	12	19	415	-16	-415	multi-exon	FALSE	canonical	1	369650	junction_11	115947.23704661445	NA	1	NA	TRUE	NA	NA	NA	C	coding	313	942	143	1084	20.0	-13	True	AGTAAA	-14
PB.9247.5	chr5	-	1470	12	full-splice_match	DIMT1	ENST00000199320.8	2859	12	32	1357	-3	299	multi-exon	FALSE	canonical	1	369650	junction_11	115947.23704661445	NA	0	NA	TRUE	NA	NA	NA	C	coding	313	942	130	1071	20.0	0	True	AATAAA	-30
PB.9247.4	chr5	-	2757	11	novel_in_catalog	DIMT1	novel	2859	12	NA	NA	-16	385	intron_retention	FALSE	canonical	1	369650	junction_10	121398.4626088815	NA	13	NA	TRUE	NA	NA	NA	C	coding	266	801	143	943	10.0	-13	True	AGTAAA	-19
PB.2056.16	chr11	+	3450	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	3975	3	-1115	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	0	True	AAAACA	-19
PB.11866.21	chr9	-	2318	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-25	68132	-25	-46718	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	1	NA	TRUE	NA	NA	NA	C	coding	703	2109	209	2317	60.0	1707	False	AGTAAA	-29
PB.11866.20	chr9	-	2511	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-1	67915	-1	-46501	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	775	2325	185	2509	60.0	-1	True	AATGAA	-39
PB.517.6	chr1	+	4599	7	full-splice_match	HS2ST1	ENST00000370550.9	6736	7	-12	2149	-12	-2149	multi-exon	FALSE	canonical	1	273246	junction_5	22993.950352333013	NA	1	NA	TRUE	NA	NA	NA	C	coding	356	1071	376	1446	30.0	-83	True	AATATA	-16
PB.841.23	chr1	+	2741	11	novel_not_in_catalog	IFI16	novel	856	3	NA	NA	-10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	440939.57323185453	NA	3	NA	TRUE	NA	NA	NA	C	coding	739	2220	275	2494	35.0	-19	True	AATAAA	-21
PB.11344.3	chr8	-	5876	30	full-splice_match	ASAP1	ENST00000518721.5	5507	30	-280	-89	-280	89	multi-exon	FALSE	canonical	1	55129	junction_29	96515.40332786794	NA	12	1	TRUE	NA	NA	NA	C	coding	1129	3390	509	3898	90.0	129	False	AATAAA	-12
PB.4810.3	chr17	-	4186	30	novel_not_in_catalog	FLII	novel	644	4	NA	NA	5	16	any annotated donor/acceptor	TRUE	canonical	1	3570	junction_9	336441.93544699135	NA	0	NA	TRUE	NA	NA	NA	C	coding	1279	3840	29	3868	40.0	19	True	ATTAAA	-41
PB.11344.5	chr8	-	5417	29	novel_in_catalog	ASAP1	novel	5478	24	NA	NA	9	90	combination_of_known_junctions	FALSE	canonical	1	55129	junction_28	107917.65702827882	NA	1	NA	TRUE	NA	NA	NA	C	coding	1072	3219	220	3438	95.0	22	True	AATAAA	-13
PB.4810.5	chr17	-	4149	30	full-splice_match	FLII	ENST00000327031.8	4338	30	184	5	-6	0	multi-exon	FALSE	canonical	1	435378	junction_19	271124.7236138207	NA	1	NA	TRUE	NA	NA	NA	C	coding	1269	3810	43	3852	50.0	5	True	ATTAAA	-20
PB.4810.6	chr17	-	4138	30	novel_in_catalog	FLII	novel	644	4	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	1	2696	junction_25	335885.0582634619	NA	4	NA	TRUE	NA	NA	NA	C	coding	1247	3744	98	3841	50.0	2514	False	ATTAAA	-20
PB.10574.1	chr7	+	2888	6	novel_in_catalog	TPST1	novel	2116	6	NA	NA	-36	-5	combination_of_known_junctions	FALSE	canonical	1	1925	junction_5	93383.92912830344	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	344	1456	30.0	-863	False	AATAAA	-14
PB.10574.3	chr7	+	3102	6	novel_not_in_catalog	TPST1	novel	2116	6	NA	NA	-9	-1	any annotated donor/acceptor	FALSE	canonical	1	28808	junction_5	83376.45448446462	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	317	1429	20.0	-836	False	AATAAA	-18
PB.10574.2	chr7	+	2845	6	novel_not_in_catalog	TPST1	novel	2116	6	NA	NA	-12	-6	any annotated donor/acceptor	FALSE	canonical	1	14518	junction_5	88674.32042254397	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	320	1432	30.0	-839	False	AATAAA	-13
PB.10574.5	chr7	+	1833	2	novel_not_in_catalog	TPST1	novel	2116	6	NA	NA	4187	7	any annotated donor/acceptor	FALSE	canonical	1	28808	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	AATAAA	-26
PB.10574.4	chr7	+	1982	6	full-splice_match	TPST1	ENST00000304842.5	2116	6	133	1	-2	-1	multi-exon	FALSE	canonical	1	163234	junction_1	37871.385694215096	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	293	1405	20.0	-2	True	AATAAA	-18
PB.10574.6	chr7	+	3746	1	novel_in_catalog	TPST1	novel	2116	6	NA	NA	4192	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	115	348	881	1228	20.0	2	True	AATAAA	-17
PB.11952.2	chrX	-	1687	3	novel_in_catalog	BX890604.2	novel	508	3	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	1	4295	junction_1	16772.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	410	817	10.0	NA	False	ATTAAA	-23
PB.11952.3	chrX	-	2347	7	novel_not_in_catalog	BX890604.2	novel	508	3	NA	NA	-40	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_4	75165.40349659247	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	416	823	10.0	NA	False	ATTAAA	-22
PB.11952.1	chrX	-	2243	7	novel_in_catalog	BX890604.2	novel	508	3	NA	NA	-51	-2	combination_of_known_junctions	FALSE	canonical	1	1176	junction_3	74414.32310158218	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	427	834	10.0	NA	False	ATTAAA	-23
PB.11952.6	chrX	-	2317	7	novel_in_catalog	BX890604.2	novel	508	3	NA	NA	-59	2	no_combination_of_known_junctions	FALSE	canonical	1	10	junction_4	77053.26408346805	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	435	842	15.0	NA	False	ATTAAA	-20
PB.11952.7	chrX	-	1813	5	novel_in_catalog	BX890604.2	novel	508	3	NA	NA	-58	1	combination_of_known_junctions	FALSE	canonical	1	8713	junction_3	80026.96828686877	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	434	841	15.0	NA	False	ATTAAA	-19
PB.11952.4	chrX	-	2297	8	novel_in_catalog	BX890604.2	novel	508	3	NA	NA	-59	-3	combination_of_known_junctions	FALSE	canonical	1	1176	junction_4	69918.87354641806	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	435	842	10.0	NA	False	ATTAAA	-22
PB.11952.5	chrX	-	1785	4	novel_in_catalog	BX890604.2	novel	508	3	NA	NA	-74	-3	no_combination_of_known_junctions	FALSE	canonical	1	17996	junction_2	89116.55151915758	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	450	857	10.0	NA	False	ATTAAA	-22
PB.8246.13	chr3	-	3418	2	novel_not_in_catalog	PROS1	novel	3583	15	NA	NA	-9	12390	any annotated donor/acceptor	FALSE	canonical	1	1667	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	105	318	1	318	30.0	-11	True	ATTAAA	-14
PB.8246.12	chr3	-	3719	2	novel_not_in_catalog	PROS1	novel	3583	15	NA	NA	19	12728	any annotated donor/acceptor	FALSE	canonical	1	1667	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	26	True	ATTAAA	-15
PB.11952.8	chrX	-	2233	3	novel_in_catalog	BX890604.2	novel	711	4	NA	NA	-74	2918	combination_of_known_junctions	FALSE	canonical	1	13778	junction_1	12031.0	NA	5	NA	TRUE	NA	NA	NA	C	coding	135	408	450	857	20.0	NA	False	NA	NA
PB.8246.10	chr3	-	2451	15	full-splice_match	PROS1	ENST00000394236.8	3583	15	3	1129	3	-971	multi-exon	FALSE	canonical	1	89731	junction_13	48419.75626392767	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2031	338	2368	25.0	-137	False	NA	NA
PB.8461.48	chr3	-	2877	2	incomplete-splice_match	WWTR1	ENST00000360632.7	2103	7	73	134452	-3	2194	3prime_fragment	FALSE	canonical	1	300895	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	144	435	268	702	70.0	-4	True	AAAAAG	-5
PB.8246.14	chr3	-	2249	2	novel_not_in_catalog	PROS1	novel	3583	15	NA	NA	4	11243	any annotated donor/acceptor	FALSE	canonical	1	1667	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	11	True	NA	NA
PB.3488.2	chr14	-	3290	14	full-splice_match	PPP2R5E	ENST00000555899.1	2164	14	-76	-1050	0	-819	multi-exon	FALSE	canonical	1	197	junction_3	100018.11779452642	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	604	1992	90.0	-14	True	TTTAAA	-41
PB.3488.3	chr14	-	3080	13	novel_in_catalog	PPP2R5E	novel	6659	14	NA	NA	-3	-850	combination_of_known_junctions	FALSE	canonical	1	197	junction_3	101318.58548766965	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	1367	1813	35.0	-17	True	AATAAA	-17
PB.9298.1	chr5	-	2416	18	novel_not_in_catalog	COL4A3BP	novel	1870	13	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	95834.74573910495	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	421	2277	10.0	-6	True	AATAAA	-20
PB.2056.14	chr11	+	3864	1	full-splice_match	MALAT1	ENST00000534336.1	8708	1	1283	3561	3	-701	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	55.0	0	True	TTTAAA	-28
PB.3488.4	chr14	-	2886	15	novel_not_in_catalog	PPP2R5E	novel	6659	14	NA	NA	-26	-844	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_14	107128.83897019533	NA	2	NA	TRUE	NA	NA	NA	C	coding	467	1404	210	1613	35.0	36	False	AATAAA	-23
PB.3488.5	chr14	-	3238	15	novel_not_in_catalog	PPP2R5E	novel	6659	14	NA	NA	-23	-845	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	107128.83897019533	NA	1	1	TRUE	NA	NA	NA	C	coding	467	1404	563	1966	40.0	-37	False	AATAAA	-22
PB.9176.2	chr5	+	2219	10	full-splice_match	BRIX1	ENST00000336767.5	1926	10	332	-625	-2	625	multi-exon	FALSE	canonical	1	454897	junction_2	187634.74025870216	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	32	1093	20.0	-8	True	AATAAA	-22
PB.7265.16	chr20	-	2983	19	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5857	junction_6	484375.8333459498	NA	0	NA	TRUE	NA	NA	NA	C	coding	241	726	854	1579	25.0	23	True	AATAAA	-17
PB.7265.15	chr20	-	4255	18	novel_not_in_catalog	RBM39	novel	5914	18	NA	NA	4	0	intron_retention	FALSE	canonical	1	4447	junction_17	484220.46196687286	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	2264	3385	25.0	-11	True	AATAAA	-17
PB.3488.9	chr14	-	2213	13	novel_not_in_catalog	PPP2R5E	novel	6659	14	NA	NA	12	190	any annotated donor/acceptor	FALSE	canonical	1	197	junction_3	105083.05578710373	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	1329	1775	20.0	18	True	AGTAAA	-20
PB.7265.13	chr20	-	4518	15	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-2	0	intron_retention	FALSE	canonical	1	93647	junction_12	447811.1829009214	NA	3	NA	TRUE	NA	NA	NA	C	coding	367	1104	2545	3648	25.0	-1	True	AATAAA	-17
PB.7265.12	chr20	-	4531	15	novel_in_catalog	RBM39	novel	5914	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	1679	junction_12	485228.20902315795	NA	2	NA	TRUE	NA	NA	NA	C	coding	373	1122	2540	3661	25.0	1	True	AATAAA	-17
PB.7265.11	chr20	-	4586	16	novel_in_catalog	RBM39	novel	5914	18	NA	NA	-4	0	intron_retention	FALSE	canonical	1	212934	junction_1	416894.73402251874	NA	2	NA	TRUE	NA	NA	NA	C	coding	367	1104	2613	3716	25.0	-3	True	AATAAA	-17
PB.3188.3	chr13	-	4385	2	full-splice_match	PCDH9	ENST00000377861.4	28227	2	109	23733	109	-23733	multi-exon	FALSE	canonical	1	70489	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	693	3791	95.0	-1	True	AATAGA	-38
PB.3188.2	chr13	-	4418	3	novel_not_in_catalog	PCDH9	novel	5709	5	NA	NA	109	-23483	any annotated donor/acceptor	FALSE	canonical	1	12440	junction_1	29024.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	1019	3060	693	3752	20.0	-1	True	AATAAA	-21
PB.3188.1	chr13	-	4636	2	full-splice_match	PCDH9	ENST00000377861.4	28227	2	109	23482	109	-23482	multi-exon	FALSE	canonical	1	70489	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	1032	3099	693	3791	20.0	-1	True	AATAAA	-22
PB.10000.1	chr6	+	6446	26	incomplete-splice_match	CUL9	ENST00000252050.8	7780	41	1	16926	1	2546	3prime_fragment	FALSE	canonical	1	31545	junction_1	27398.358246172338	NA	16	NA	TRUE	NA	NA	NA	C	coding	1749	5250	84	5333	25.0	-20	True	NA	NA
PB.3188.6	chr13	-	3056	2	novel_not_in_catalog	PCDH9	novel	5709	5	NA	NA	109	-24833	any annotated donor/acceptor	FALSE	canonical	1	4200	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2592	464	3055	80.0	-1	True	NA	NA
PB.3188.5	chr13	-	3435	2	full-splice_match	PCDH9	ENST00000377861.4	28227	2	-41	24833	-41	-24833	multi-exon	FALSE	canonical	1	70489	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2592	843	3434	80.0	-104	False	NA	NA
PB.3188.4	chr13	-	4198	3	novel_not_in_catalog	PCDH9	novel	5709	5	NA	NA	125	-23687	any annotated donor/acceptor	FALSE	canonical	1	12440	junction_1	29024.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	677	3736	65.0	15	True	AATATA	-9
PB.2004.1	chr11	+	812	8	full-splice_match	POLR2G	ENST00000301788.11	827	8	13	2	-8	1	multi-exon	FALSE	canonical	1	1614701	junction_2	223307.86605098553	NA	0	NA	TRUE	NA	NA	NA	A	coding	172	519	93	611	20.0	15	True	TATAAA	-15
PB.8883.5	chr4	-	1706	6	full-splice_match	SNCA	ENST00000394991.7	1290	6	32	-448	3	279	multi-exon	FALSE	canonical	1	580371	junction_5	491694.25324467645	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	261	683	25.0	-36	True	NA	NA
PB.697.3	chr1	-	3841	1	novel_in_catalog	LINC01138	novel	1709	9	NA	NA	382	2966	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	coding	186	561	2	562	15.0	-2197626	True	AATAAA	-14
PB.177.9	chr1	+	3785	18	novel_in_catalog	SRRM1	novel	480	5	NA	NA	1	3	intron_retention	FALSE	canonical	1	29283	junction_8	218709.99183414085	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	55	1404	20.0	-29	True	AATAAA	-20
PB.1281.1	chr10	+	2081	1	antisense	novelGene_IL15RA_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-77	False	NA	NA
PB.8350.2	chr3	+	3301	9	full-splice_match	DIRC2	ENST00000261038.5	3596	9	272	23	-17	-23	multi-exon	FALSE	canonical	1	121892	junction_4	27358.182002830523	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	127	1563	75.0	-3	True	AAGAAA	-44
PB.8350.1	chr3	+	2112	9	full-splice_match	DIRC2	ENST00000261038.5	3596	9	259	1225	-30	166	multi-exon	TRUE	canonical	1	121892	junction_4	27358.182002830523	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	140	1576	25.0	-16	True	AATAAA	-16
PB.177.8	chr1	+	3281	17	full-splice_match	SRRM1	ENST00000323848.13	4011	17	260	470	0	171	multi-exon	FALSE	canonical	1	68130	junction_12	198644.4456901793	NA	0	NA	TRUE	NA	NA	NA	C	coding	904	2715	56	2770	5.0	-30	True	TATAAA	-20
PB.4688.1	chr17	+	4952	32	novel_not_in_catalog	MINK1	novel	4961	32	NA	NA	-48	-1	any annotated donor/acceptor	FALSE	canonical	1	55983	junction_15	220589.46082234723	NA	4	1	TRUE	NA	NA	NA	C	coding	1311	3936	245	4180	15.0	-38	True	AATAAA	-22
PB.7936.4	chr3	-	1844	9	novel_in_catalog	SEC13	novel	393	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	64909	junction_8	587962.4075768869	NA	0	NA	TRUE	NA	NA	NA	C	coding	308	927	590	1516	15.0	53	True	AATAAA	-15
PB.4688.3	chr17	+	4997	32	full-splice_match	MINK1	ENST00000355280.10	4961	32	-29	-7	-29	0	multi-exon	FALSE	canonical	1	224652	junction_12	200485.68888252685	NA	1	NA	TRUE	NA	NA	NA	C	coding	1332	3999	226	4224	15.0	-19	True	AATAAA	-23
PB.4688.2	chr17	+	5384	31	novel_in_catalog	MINK1	novel	4961	32	NA	NA	-29	3	intron_retention	FALSE	canonical	1	224652	junction_12	197362.25182915974	NA	1	NA	TRUE	NA	NA	NA	C	coding	885	2658	226	2883	20.0	-19	True	AATAAA	-20
PB.4688.4	chr17	+	4877	31	novel_in_catalog	MINK1	novel	4961	32	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	93429	junction_17	207202.03723408864	NA	2	NA	TRUE	NA	NA	NA	C	coding	1295	3888	217	4104	15.0	-10	True	AATAAA	-23
PB.1107.12	chr1	-	6173	7	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	-158	-1527	no_combination_of_known_junctions	FALSE	canonical	1	7315	junction_4	111793.59850436676	NA	3	NA	TRUE	NA	NA	NA	C	coding	338	1017	242	1258	30.0	437	False	AATAAA	-17
PB.10691.1	chr7	-	1950	13	full-splice_match	ASNS	ENST00000394308.7	1994	13	45	-1	10	1	multi-exon	FALSE	canonical	1	647958	junction_12	196785.47117925918	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	136	1821	25.0	0	True	AATAAA	-14
PB.10691.2	chr7	-	2266	14	full-splice_match	ASNS	ENST00000175506.8	2356	14	77	13	2	0	multi-exon	FALSE	canonical	1	35912	junction_12	389417.2995830365	NA	0	NA	TRUE	NA	NA	NA	C	coding	561	1686	453	2138	30.0	-39	True	AATAAA	-13
PB.10691.5	chr7	-	1643	11	full-splice_match	ASNS	ENST00000455086.5	1588	11	-35	-20	7	-1	multi-exon	FALSE	canonical	1	6129	junction_10	350258.6649326609	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	80	1516	30.0	-3	True	AATAAA	-12
PB.1107.19	chr1	-	3819	8	full-splice_match	LPGAT1	ENST00000366997.8	7782	8	-10	3973	-10	2363	multi-exon	FALSE	canonical	1	17621	junction_7	88684.87104808986	NA	6	NA	TRUE	NA	NA	NA	C	coding	370	1113	238	1350	25.0	-20	True	ATTAAA	-27
PB.6814.2	chr2	-	5186	14	novel_not_in_catalog	GALNT3	novel	3868	11	NA	NA	-51572	-2	any annotated donor/acceptor	FALSE	canonical	1	602	junction_11	81096.71949201684	NA	3	1	TRUE	NA	NA	NA	B	coding	633	1902	2309	4210	25.0	67	False	AATAAA	-20
PB.7957.4	chr3	-	1757	13	incomplete-splice_match	RBSN	ENST00000253699.7	6678	14	12	5584	0	-752	3prime_fragment	FALSE	canonical	1	53597	junction_11	47235.00789396627	NA	0	NA	TRUE	NA	NA	NA	B	coding	385	1155	603	1757	65.0	11	True	NA	NA
PB.7957.3	chr3	-	3436	14	novel_not_in_catalog	RBSN	novel	6678	14	NA	NA	1	27	any annotated donor/acceptor	FALSE	canonical	1	12530	junction_9	54155.81762276822	NA	1	NA	TRUE	NA	NA	NA	B	coding	696	2091	1142	3232	30.0	0	True	AATAAA	-19
PB.7957.2	chr3	-	5644	14	novel_not_in_catalog	RBSN	novel	6678	14	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	56292.338589454805	NA	2	1	TRUE	NA	NA	NA	B	coding	784	2355	458	2812	0.0	0	True	AATAAA	-14
PB.7957.1	chr3	-	3099	1	incomplete-splice_match	RBSN	ENST00000253699.7	6678	14	25977	0	8389	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	0.0	-7920	False	AATAAA	-14
PB.8117.1	chr3	-	2766	1	novel_in_catalog	BSN-DT	novel	2603	3	NA	NA	-11	-291	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	103	312	2271	2582	15.0	186	False	AATAAA	-20
PB.7936.1	chr3	-	1358	9	full-splice_match	SEC13	ENST00000350697.7	1425	9	66	1	0	-1	multi-exon	FALSE	canonical	1	1033273	junction_7	344637.4094802391	NA	0	NA	TRUE	NA	NA	NA	C	coding	322	969	61	1029	15.0	-1	True	AATAAA	-16
PB.5795.5	chr19	-	3241	18	novel_not_in_catalog	RASAL3	novel	1717	4	NA	NA	20	-3	any annotated donor/acceptor	FALSE	canonical	1	6959	junction_7	81455.50623075126	NA	2	NA	TRUE	NA	NA	NA	C	coding	581	1746	67	1812	15.0	-10	True	AGTAAA	-16
PB.5795.4	chr19	-	3261	18	novel_not_in_catalog	RASAL3	novel	1717	4	NA	NA	7	-7	any annotated donor/acceptor	FALSE	canonical	1	15893	junction_17	78905.99402846007	NA	3	NA	TRUE	NA	NA	NA	C	coding	1005	3018	80	3097	20.0	1	True	AGTAAA	-12
PB.5795.7	chr19	-	3237	18	novel_not_in_catalog	RASAL3	novel	1717	4	NA	NA	5	-4	any annotated donor/acceptor	FALSE	canonical	1	2957	junction_7	88841.2305533991	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	82	1815	15.0	-1	True	AGTAAA	-15
PB.5795.6	chr19	-	3807	17	novel_in_catalog	RASAL3	novel	1717	4	NA	NA	-26	-4	intron_retention	FALSE	canonical	1	15893	junction_16	69238.52465455806	NA	1	NA	TRUE	NA	NA	NA	C	coding	943	2832	56	2887	15.0	1	True	AGTAAA	-15
PB.5795.1	chr19	-	4747	16	novel_in_catalog	RASAL3	novel	1717	4	NA	NA	6	-3	intron_retention	FALSE	canonical	1	15893	junction_15	73555.77339630717	NA	6	2	TRUE	NA	NA	NA	C	coding	556	1671	81	1751	15.0	0	True	AGTAAA	-16
PB.7936.2	chr3	-	3948	8	novel_in_catalog	SEC13	novel	393	3	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1033273	junction_6	367433.5748240762	NA	2	NA	TRUE	NA	NA	NA	C	coding	254	765	2855	3619	15.0	-1	True	AATAAA	-16
PB.5795.3	chr19	-	3284	18	full-splice_match	RASAL3	ENST00000343625.11	3293	18	6	3	6	-3	multi-exon	FALSE	canonical	1	15893	junction_17	69402.19540358482	NA	2	NA	TRUE	NA	NA	NA	C	coding	1011	3036	81	3116	15.0	0	True	AGTAAA	-16
PB.5795.2	chr19	-	3512	17	novel_in_catalog	RASAL3	novel	1717	4	NA	NA	-26	-3	intron_retention	FALSE	canonical	1	15893	junction_16	71294.8790077827	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	1848	3344	15.0	1	True	AGTAAA	-16
PB.6814.3	chr2	-	5200	18	novel_not_in_catalog	GALNT3	novel	3868	11	NA	NA	-51415	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_10	90933.14461898686	NA	13	1	TRUE	NA	NA	NA	B	coding	633	1902	2323	4224	25.0	11	True	AATAAA	-20
PB.5795.8	chr19	-	3279	18	novel_not_in_catalog	RASAL3	novel	1717	4	NA	NA	18	-5	any annotated donor/acceptor	FALSE	canonical	1	2157	junction_7	82054.64286714898	NA	5	1	TRUE	NA	NA	NA	C	coding	1014	3045	69	3113	15.0	-12	True	AGTAAA	-14
PB.10884.1	chr7	-	3833	15	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	28996	junction_7	52095.84892728097	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	173	886	25.0	-4	True	AATAAA	-16
PB.9870.19	chr6	-	2198	6	incomplete-splice_match	DDX39B	ENST00000462256.5	4027	10	-53	3808	-52	-1247	3prime_fragment	FALSE	canonical	1	1163204	junction_5	763582.3351667062	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	124	996	85.0	5461	False	NA	NA
PB.10884.3	chr7	-	3386	16	novel_in_catalog	SLC37A3	novel	3488	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	744	junction_13	70953.913191279	NA	1	NA	TRUE	NA	NA	NA	C	coding	442	1329	400	1728	25.0	19	True	AATAAA	-16
PB.10884.2	chr7	-	3489	17	novel_not_in_catalog	SLC37A3	novel	3488	16	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	79147.99295068128	NA	14	1	TRUE	NA	NA	NA	C	coding	494	1485	347	1831	25.0	-4	True	AATAAA	-16
PB.3176.8	chr13	-	3173	18	full-splice_match	INTS6	ENST00000311234.8	3662	18	-38	527	-21	-18	multi-exon	FALSE	canonical	1	9009	junction_14	68790.09448774742	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2661	512	3172	55.0	-1	True	NA	NA
PB.10884.4	chr7	-	3278	15	full-splice_match	SLC37A3	ENST00000326232.13	3349	15	32	39	-9	0	multi-exon	FALSE	canonical	1	114704	junction_14	35623.454867244014	NA	1	NA	TRUE	NA	NA	NA	C	coding	494	1485	173	1657	65.0	-4	True	AAAAAG	-11
PB.5847.1	chr19	+	1907	4	full-splice_match	UBA52	ENST00000597451.5	514	4	-1395	2	-5	-2	multi-exon	FALSE	canonical	1	8634962	junction_2	5684422.792532824	NA	0	NA	TRUE	NA	NA	NA	A	coding	128	387	1432	1818	15.0	1	True	AATAAA	-27
PB.10884.6	chr7	-	3340	16	novel_not_in_catalog	SLC37A3	novel	3488	16	NA	NA	15	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_14	78525.8181141011	NA	2	1	TRUE	NA	NA	NA	C	coding	222	669	163	831	25.0	71	False	AATAAA	-16
PB.3176.4	chr13	-	3106	18	full-splice_match	INTS6	ENST00000311234.8	3662	18	555	1	-111	0	multi-exon	FALSE	canonical	1	9009	junction_14	68790.09448774742	NA	1	1	TRUE	NA	NA	NA	C	coding	852	2559	24	2582	20.0	592	False	AATAAA	-12
PB.3176.5	chr13	-	3166	18	full-splice_match	INTS6	ENST00000311234.8	3662	18	321	175	-27	101	multi-exon	FALSE	canonical	1	9009	junction_14	68790.09448774742	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	153	2816	65.0	7	True	TTTAAA	-32
PB.3176.7	chr13	-	3067	18	full-splice_match	INTS6	ENST00000311234.8	3662	18	315	280	-33	-4	multi-exon	FALSE	canonical	1	9009	junction_14	68790.09448774742	NA	0	NA	TRUE	NA	NA	NA	C	coding	887	2664	159	2822	20.0	1	True	ACTAAA	-11
PB.3176.1	chr13	-	5710	18	full-splice_match	INTS6	ENST00000311234.8	3662	18	512	-2560	-154	-1102	multi-exon	FALSE	canonical	1	9009	junction_14	68790.09448774742	NA	2	NA	TRUE	NA	NA	NA	C	coding	874	2625	1	2625	30.0	549	False	AATAAA	-22
PB.7925.1	chr3	+	2362	18	full-splice_match	IL17RC	ENST00000648140.1	2353	18	-11	2	0	-1	multi-exon	FALSE	canonical	1	127886	junction_17	54701.3615830994	NA	1	NA	TRUE	NA	NA	NA	C	coding	705	2118	219	2336	15.0	-11	True	AATAAA	-22
PB.7065.8	chr2	+	2347	21	novel_in_catalog	ARMC9	novel	2300	21	NA	NA	-18	-7	combination_of_known_junctions	FALSE	canonical	1	28650	junction_1	45262.5298401172	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	249	2246	35.0	7	True	AATAAA	-13
PB.10292.2	chr6	-	3417	13	novel_not_in_catalog	CNKSR3	novel	21063	13	NA	NA	0	165	any annotated donor/acceptor	FALSE	canonical	1	285	junction_1	27563.519823788632	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	546	1967	35.0	-2	True	AATATA	-25
PB.10292.3	chr6	-	3186	13	full-splice_match	CNKSR3	ENST00000607772.5	21063	13	81	17796	81	163	multi-exon	FALSE	canonical	1	81049	junction_11	10410.970978838728	NA	1	NA	TRUE	NA	NA	NA	C	coding	555	1668	465	2132	40.0	-42	True	AATATA	-23
PB.10292.1	chr6	-	3346	13	full-splice_match	CNKSR3	ENST00000607772.5	21063	13	73	17644	73	315	multi-exon	FALSE	canonical	1	81049	junction_11	10410.970978838728	NA	4	NA	TRUE	NA	NA	NA	C	coding	555	1668	473	2140	20.0	98	False	AATAAA	-12
PB.10292.4	chr6	-	2811	13	novel_not_in_catalog	CNKSR3	novel	21063	13	NA	NA	-82	163	any annotated donor/acceptor	FALSE	canonical	1	29	junction_12	27628.862073422828	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	129	1757	40.0	-490	False	AATATA	-23
PB.9553.20	chr5	-	3288	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	157	-886	2	886	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	432	1445	30.0	112	False	AATAAA	-27
PB.9553.21	chr5	-	3409	11	full-splice_match	CSNK1A1	ENST00000515768.5	1098	11	-472	-1839	-39	882	multi-exon	FALSE	canonical	1	219238	junction_7	505850.07598532585	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	473	1570	40.0	-1	True	AATAAA	-23
PB.9553.22	chr5	-	3252	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-3	2818	-3	881	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	2	NA	TRUE	NA	NA	NA	C	coding	325	978	437	1414	45.0	107	False	AATAAA	-22
PB.9553.23	chr5	-	2956	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	157	-554	2	554	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	432	1445	25.0	112	False	ATTAAA	-16
PB.9553.24	chr5	-	2984	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	-65	3148	-65	551	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	499	1476	20.0	45	False	ATTAAA	-13
PB.9553.25	chr5	-	2519	10	full-splice_match	CSNK1A1	ENST00000261798.9	6067	10	11	3537	11	162	multi-exon	FALSE	canonical	1	567729	junction_2	411922.706249547	NA	3	NA	TRUE	NA	NA	NA	C	coding	325	978	423	1400	35.0	121	False	NA	NA
PB.9553.26	chr5	-	2452	10	full-splice_match	CSNK1A1	ENST00000377843.6	2559	10	107	0	-48	0	multi-exon	FALSE	canonical	1	467947	junction_1	434265.40630407626	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	482	1495	30.0	-10	True	AATAAA	-31
PB.9451.2	chr5	+	2457	8	novel_not_in_catalog	TCF7	novel	3045	10	NA	NA	49	-10	intron_retention	FALSE	canonical	1	246	junction_1	162851.3033795191	NA	0	NA	TRUE	NA	NA	NA	B	coding	251	756	32	787	100.0	-8695	False	NA	NA
PB.5425.1	chr18	+	1952	14	full-splice_match	TTC39C	ENST00000317571.7	2442	14	102	388	102	131	multi-exon	TRUE	canonical	1	78668	junction_1	49488.42703324538	NA	0	NA	TRUE	NA	NA	NA	A	coding	583	1752	135	1886	30.0	-17	False	AATAAA	-10
PB.11537.4	chr9	-	4832	11	novel_in_catalog	RNF38	novel	5012	12	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	10005	junction_10	82311.43472355466	NA	7	1	TRUE	NA	NA	NA	C	coding	427	1284	201	1484	30.0	7	True	AATAAA	-17
PB.2185.1	chr11	-	2992	11	incomplete-splice_match	RSF1	ENST00000308488.10	11550	16	288	23802	-18	-29	3prime_fragment	FALSE	canonical	1	155901	junction_10	33801.62690182235	NA	0	NA	TRUE	NA	NA	NA	C	coding	992	2976	16	2991	75.0	-8	True	NA	NA
PB.9372.1	chr5	+	1593	3	full-splice_match	C5orf30	ENST00000319933.6	3049	3	13	1443	13	-11	multi-exon	FALSE	canonical	1	79186	junction_1	58246.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	206	621	296	916	50.0	-711	False	ATTAAA	-11
PB.2185.3	chr11	-	2302	6	full-splice_match	RSF1	ENST00000528095.5	2107	6	-18	-177	-18	177	multi-exon	FALSE	canonical	1	155901	junction_5	45102.84085775529	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2286	16	2301	65.0	-8	True	AAAACA	-16
PB.2185.2	chr11	-	2469	6	full-splice_match	RSF1	ENST00000528095.5	2107	6	-18	-344	-18	344	multi-exon	FALSE	canonical	1	155901	junction_5	45102.84085775529	NA	0	NA	TRUE	NA	NA	NA	C	coding	818	2454	16	2469	65.0	-8	True	NA	NA
PB.9372.4	chr5	+	2063	3	full-splice_match	C5orf30	ENST00000319933.6	3049	3	63	923	63	509	multi-exon	FALSE	canonical	1	79186	junction_1	58246.0	NA	2	1	TRUE	NA	NA	NA	C	coding	206	621	246	866	60.0	-1	True	AATATA	-6
PB.9372.5	chr5	+	2723	3	full-splice_match	C5orf30	ENST00000515669.5	1573	3	-6	-1144	-6	1	multi-exon	FALSE	canonical	1	8857	junction_1	93410.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	271	891	10.0	0	True	AATAAA	-18
PB.9372.6	chr5	+	2989	3	full-splice_match	C5orf30	ENST00000515669.5	1573	3	14	-1430	14	-2	multi-exon	FALSE	canonical	1	8857	junction_1	93410.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	251	871	0.0	20	True	AATAAA	-13
PB.9372.7	chr5	+	2892	3	full-splice_match	C5orf30	ENST00000510890.1	2933	3	-18	59	-18	-59	multi-exon	FALSE	canonical	1	9617	junction_1	93030.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	500	1120	25.0	-20	False	ATTAAA	-18
PB.5334.2	chr17	+	2651	1	novel_in_catalog	MAFG-DT	novel	1895	2	NA	NA	18	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	143	432	1781	2212	95.0	0	True	NA	NA
PB.608.9	chr1	-	2565	4	full-splice_match	LRIF1	ENST00000369763.4	3475	4	128	782	14	-745	multi-exon	FALSE	canonical	1	78626	junction_3	64235.98068061232	NA	0	NA	TRUE	NA	NA	NA	C	coding	767	2301	264	2564	55.0	0	True	AAGAAA	-19
PB.5334.1	chr17	+	1963	2	novel_not_in_catalog	MAFG-DT	novel	1895	2	NA	NA	12	-19	intron_retention	FALSE	canonical	1	7820	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	143	432	1092	1523	90.0	-6	True	NA	NA
PB.608.4	chr1	-	2263	3	novel_not_in_catalog	LRIF1	novel	3475	4	NA	NA	78	511	any annotated donor/acceptor	FALSE	canonical	1	32147	junction_1	53565.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	280	978	100.0	-4	True	NA	NA
PB.8118.11	chr3	+	2214	21	novel_in_catalog	APEH	novel	3220	22	NA	NA	5	6	combination_of_known_junctions	FALSE	canonical	1	20581	junction_5	312566.86072363384	NA	1	NA	TRUE	NA	NA	NA	C	coding	517	1554	494	2047	10.0	23	True	AATAAA	-19
PB.608.6	chr1	-	3314	4	full-splice_match	LRIF1	ENST00000369763.4	3475	4	157	4	43	2	multi-exon	FALSE	canonical	1	78626	junction_3	64235.98068061232	NA	1	NA	TRUE	NA	NA	NA	C	coding	769	2310	235	2544	10.0	-1	True	NA	NA
PB.608.7	chr1	-	1825	3	full-splice_match	LRIF1	ENST00000485275.2	1796	3	3	-32	3	1	multi-exon	FALSE	canonical	1	139277	junction_2	45795.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	355	1056	10.0	-11	True	NA	NA
PB.608.1	chr1	-	3925	4	novel_not_in_catalog	LRIF1	novel	3475	4	NA	NA	56	21276	any annotated donor/acceptor	FALSE	canonical	1	1765	junction_1	49104.52681327411	NA	3	NA	TRUE	NA	NA	NA	C	coding	646	1941	222	2162	10.0	12	True	NA	NA
PB.608.2	chr1	-	2435	3	novel_not_in_catalog	LRIF1	novel	3475	4	NA	NA	11	21269	any annotated donor/acceptor	FALSE	canonical	1	1765	junction_1	68756.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	110	333	347	679	30.0	-3	True	NA	NA
PB.8118.10	chr3	+	2120	20	novel_in_catalog	APEH	novel	3220	22	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	17270	junction_1	270188.18862268527	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	65	1960	10.0	14	True	AATAAA	-12
PB.9612.9	chr5	+	3578	27	incomplete-splice_match	DOCK2	ENST00000524185.5	5656	53	-14	241353	2	46	3prime_fragment	FALSE	canonical	1	181455	junction_1	76984.66915961505	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2850	51	2900	20.0	2	True	NA	NA
PB.9612.8	chr5	+	5959	51	novel_in_catalog	DOCK2	novel	6097	52	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	2844	junction_16	96456.50636352946	NA	39	5	TRUE	NA	NA	NA	C	coding	1117	3354	2088	5441	25.0	0	True	AATAAA	-18
PB.943.3	chr1	-	3174	2	novel_in_catalog	GAS5	novel	542	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	189239	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-3	True	AATAAA	-13
PB.9612.3	chr5	+	3791	27	novel_not_in_catalog	DOCK2	novel	6097	52	NA	NA	0	63917	any annotated donor/acceptor	FALSE	canonical	1	1751	junction_26	113160.46631696285	NA	0	NA	TRUE	NA	NA	NA	C	coding	866	2601	81	2681	35.0	-28	True	NA	NA
PB.9612.2	chr5	+	5940	50	novel_in_catalog	DOCK2	novel	6097	52	NA	NA	-1	0	no_combination_of_known_junctions	TRUE	canonical	1	880	junction_3	94673.82241665112	NA	0	NA	TRUE	NA	NA	NA	C	coding	1779	5340	82	5421	25.0	-29	True	AATAAA	-19
PB.9612.1	chr5	+	6060	52	full-splice_match	DOCK2	ENST00000520908.6	6069	52	4	5	4	0	multi-exon	FALSE	canonical	1	181455	junction_1	82442.31403029479	NA	1	NA	TRUE	NA	NA	NA	C	coding	1830	5493	49	5541	25.0	4	True	AATAAA	-19
PB.8118.12	chr3	+	2225	21	novel_in_catalog	APEH	novel	3220	22	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	1	45464	junction_6	312113.43042914703	NA	1	NA	TRUE	NA	NA	NA	C	coding	686	2061	5	2065	10.0	31	True	AATAAA	-12
PB.9612.7	chr5	+	6152	53	novel_not_in_catalog	DOCK2	novel	6097	52	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	3399	junction_4	103628.2278114497	NA	0	NA	TRUE	NA	NA	NA	C	coding	1858	5577	57	5633	25.0	-4	True	AATAAA	-19
PB.9612.6	chr5	+	6178	52	novel_not_in_catalog	DOCK2	novel	6097	52	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	2661	junction_35	94396.15094477513	NA	0	NA	TRUE	NA	NA	NA	C	coding	1257	3774	57	3830	25.0	-4	True	AATAAA	-19
PB.9612.5	chr5	+	3109	28	novel_in_catalog	DOCK2	novel	6097	52	NA	NA	3	13	combination_of_known_junctions	FALSE	canonical	1	11828	junction_27	94682.51605482333	NA	0	NA	TRUE	NA	NA	NA	C	coding	957	2874	78	2951	30.0	-25	True	AATAAA	-36
PB.9612.4	chr5	+	5989	51	novel_in_catalog	DOCK2	novel	6097	52	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	3453	junction_14	95321.69562303222	NA	3	NA	TRUE	NA	NA	NA	C	coding	1797	5394	78	5471	25.0	-25	True	AATAAA	-18
PB.5857.1	chr19	-	1418	9	full-splice_match	MEF2B	ENST00000424583.6	1405	9	-12	-1	6	0	multi-exon	TRUE	canonical	1	78342	junction_1	69231.84152349536	NA	0	NA	TRUE	NA	NA	NA	A	coding	368	1107	83	1189	20.0	3	True	AATAAA	-25
PB.4081.1	chr15	+	4183	16	novel_not_in_catalog	FURIN	novel	4244	16	NA	NA	627	-2	intron_retention	FALSE	canonical	1	9652	junction_1	248043.97606136074	NA	0	NA	TRUE	NA	NA	NA	A	coding	794	2385	221	2605	10.0	-4	True	ATTAAA	-21
PB.8155.1	chr3	-	1563	3	full-splice_match	RPL29	ENST00000481629.1	880	3	-15	-668	-1	0	multi-exon	FALSE	canonical	1	156616	junction_1	1873710.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	148	447	997	1443	15.0	-2	True	AATAAA	-12
PB.8303.5	chr3	-	3190	18	novel_in_catalog	AC112128.1	novel	6837	39	NA	NA	-29	-82885	intron_retention	FALSE	canonical	1	42466	junction_17	28836.087157117418	NA	0	NA	TRUE	NA	NA	NA	B	coding	855	2568	102	2669	45.0	-25	True	AATATA	-8
PB.11263.10	chr8	-	1314	9	incomplete-splice_match	STK3	ENST00000419617.6	2826	11	-39	93343	-39	-10	3prime_fragment	FALSE	canonical	1	124301	junction_8	44504.49667659999	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1134	181	1314	30.0	-50	True	GATAAA	-32
PB.4310.26	chr16	-	5082	15	novel_in_catalog	GGA2	novel	5973	17	NA	NA	-1	0	intron_retention	FALSE	canonical	1	350013	junction_14	124277.49629989908	NA	5	NA	TRUE	NA	NA	NA	C	coding	526	1581	2503	4083	20.0	0	True	AATAAA	-18
PB.8044.9	chr3	-	2796	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	-12	-1404	-12	1404	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	157	1068	65.0	-8	True	NA	NA
PB.8044.8	chr3	-	3160	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	-18	-1762	7	1762	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	163	1074	65.0	-14	True	AATAGA	-41
PB.9940.1	chr6	+	739	6	full-splice_match	SNRPC	ENST00000244520.9	842	6	99	4	-20	-4	multi-exon	FALSE	canonical	1	675801	junction_3	423707.7389718531	NA	0	NA	TRUE	NA	NA	NA	A	coding	159	480	40	519	20.0	-9	True	AATAAA	-20
PB.6369.5	chr2	+	3230	16	full-splice_match	AGBL5	ENST00000487078.5	3261	16	22	9	0	-7	multi-exon	FALSE	canonical	1	39170	junction_14	143894.4159842209	NA	0	NA	TRUE	NA	NA	NA	C	coding	816	2451	173	2623	35.0	0	True	AATAAA	-11
PB.886.9	chr1	+	7382	8	full-splice_match	UHMK1	ENST00000489294.1	8478	8	-18	1114	-18	-1114	multi-exon	FALSE	canonical	1	279935	junction_1	89999.36959371051	NA	2	NA	TRUE	NA	NA	NA	C	coding	419	1260	177	1436	10.0	-21	True	AATAAA	-10
PB.6414.20	chr2	-	2585	17	full-splice_match	EIF2AK2	ENST00000233057.8	10042	17	82	7375	67	688	multi-exon	FALSE	canonical	1	57657	junction_16	100944.33502846924	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	242	1897	85.0	1	True	NA	NA
PB.12283.10	chrX	+	7051	16	full-splice_match	INTS6L	ENST00000493637.6	6710	16	-346	5	4	2	multi-exon	FALSE	canonical	1	47145	junction_13	42290.735499555136	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	5110	6183	35.0	-13	True	AATAAA	-21
PB.12283.11	chrX	+	3234	19	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	19546	junction_18	47119.175508019616	NA	0	NA	TRUE	NA	NA	NA	C	coding	894	2685	347	3031	35.0	-13	True	AATAAA	-20
PB.12283.12	chrX	+	3120	18	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	19546	junction_17	47237.71592011495	NA	2	NA	TRUE	NA	NA	NA	C	coding	857	2574	343	2916	35.0	-9	True	AATAAA	-21
PB.12283.13	chrX	+	2997	18	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	1	19546	junction_17	48430.40812008713	NA	0	NA	TRUE	NA	NA	NA	C	coding	813	2442	335	2776	30.0	-1	True	AATAAA	-38
PB.12283.14	chrX	+	2820	17	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	128	0	no_combination_of_known_junctions	FALSE	canonical	1	3266	junction_16	48555.85004002479	NA	0	NA	TRUE	NA	NA	NA	C	coding	788	2367	207	2573	35.0	8	True	AATAAA	-26
PB.12283.15	chrX	+	3220	18	novel_in_catalog	INTS6L	novel	3904	18	NA	NA	145	0	intron_retention	FALSE	canonical	1	19546	junction_17	47329.28756113895	NA	0	NA	TRUE	NA	NA	NA	C	coding	844	2535	477	3011	35.0	25	True	AATAAA	-26
PB.8044.5	chr3	-	3431	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	-15	-2036	10	2036	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	160	1071	95.0	-11	True	NA	NA
PB.8044.4	chr3	-	4484	7	full-splice_match	SEC22C	ENST00000264454.7	1380	7	6	-3110	4	-1631	multi-exon	FALSE	canonical	1	129936	junction_1	112877.46498108272	NA	3	NA	TRUE	NA	NA	NA	C	coding	303	912	139	1050	25.0	10	True	ATTAAA	-19
PB.7384.11	chr20	+	1704	14	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	18	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7166430.997190201	NA	3	1	TRUE	NA	NA	NA	C	coding	394	1185	195	1379	85.0	-9	True	NA	NA
PB.7384.10	chr20	+	1665	13	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	27	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7639983.516166291	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	166	1308	35.0	0	True	AATAAA	-15
PB.7384.13	chr20	+	1663	13	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	24	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	7639981.541482019	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	196	1338	85.0	-3	True	NA	NA
PB.7384.12	chr20	+	1745	14	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	20	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7166430.997190201	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	203	1387	30.0	-7	True	AATAAA	-16
PB.7384.15	chr20	+	1551	14	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	57	-25	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7166430.997190201	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	42	1226	85.0	0	True	NA	NA
PB.7384.14	chr20	+	1619	14	novel_not_in_catalog	GNAS	novel	2578	13	NA	NA	25	-83	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	7166430.997190201	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	168	1352	75.0	-2	True	NA	NA
PB.7384.19	chr20	+	3347	12	incomplete-splice_match	GNAS	ENST00000371085.7	1972	13	2333	38	1303	-25	5prime_fragment	FALSE	canonical	1	4667514	junction_1	6028571.640718268	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	2015	3022	85.0	-9897	False	NA	NA
PB.9229.5	chr5	+	5097	26	incomplete-splice_match	MTREX	ENST00000230640.9	4192	27	236	596	-5	0	intron_retention	FALSE	canonical	1	293780	junction_10	101830.60052538234	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	19	3129	15.0	-5	True	AATAAA	-25
PB.8943.1	chr4	+	3968	2	novel_not_in_catalog	AC023886.1	novel	685	2	NA	NA	-1049	979	intron_retention	FALSE	canonical	1	4598	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	TATAAA	-37
PB.9229.4	chr5	+	3221	27	full-splice_match	MTREX	ENST00000230640.9	4192	27	231	740	-10	-144	multi-exon	FALSE	canonical	1	293780	junction_10	106909.144197837	NA	1	NA	TRUE	NA	NA	NA	C	coding	1042	3129	24	3152	15.0	-10	True	TTTAAA	-41
PB.795.2	chr1	+	2600	7	full-splice_match	MTX1	ENST00000481771.5	2579	7	-13	-8	0	7	multi-exon	FALSE	canonical	1	3684	junction_4	372008.7796991117	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	1802	2467	35.0	0	True	AATAAA	-23
PB.795.1	chr1	+	1112	8	full-splice_match	MTX1	ENST00000609421.1	1085	8	-23	-4	-14	4	multi-exon	FALSE	canonical	1	3684	junction_5	348250.1357582401	NA	0	NA	TRUE	NA	NA	NA	C	coding	317	954	29	982	25.0	-14	True	AATAAA	-20
PB.1812.24	chr11	+	1790	10	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	177	-316	combination_of_known_junctions	FALSE	canonical	1	3906	junction_1	191686.81602725488	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	275	1585	75.0	NA	False	NA	NA
PB.1812.25	chr11	+	3436	10	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	192	15	combination_of_known_junctions	FALSE	canonical	1	3906	junction_1	191686.81602725488	NA	2	NA	TRUE	NA	NA	NA	C	coding	436	1311	260	1570	40.0	NA	False	AATAAA	-34
PB.1812.26	chr11	+	2751	7	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	199	-15	combination_of_known_junctions	FALSE	canonical	1	3906	junction_1	184501.7891256222	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	253	1278	100.0	NA	False	NA	NA
PB.1812.27	chr11	+	1923	10	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	209	-151	combination_of_known_junctions	FALSE	canonical	1	3906	junction_1	191686.81602725488	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	243	1553	80.0	NA	False	NA	NA
PB.1812.21	chr11	+	4391	10	novel_not_in_catalog	SWAP70	novel	3538	11	NA	NA	-3085	-42	any annotated donor/acceptor	FALSE	canonical	1	2054	junction_1	192190.98102771383	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	66	1412	35.0	NA	False	ATTAAA	-12
PB.1812.22	chr11	+	4586	10	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	196	-1	combination_of_known_junctions	FALSE	canonical	1	3906	junction_1	191686.81602725488	NA	1	NA	TRUE	NA	NA	NA	C	coding	436	1311	256	1566	25.0	NA	False	AATAAA	-13
PB.1812.23	chr11	+	2095	10	novel_in_catalog	SWAP70	novel	3538	11	NA	NA	174	-14	combination_of_known_junctions	FALSE	canonical	1	3906	junction_1	191686.81602725488	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	278	1588	75.0	NA	False	NA	NA
PB.11711.3	chr9	-	4188	26	full-splice_match	PTPN3	ENST00000374541.3	6703	26	-16	2531	-9	-2531	multi-exon	FALSE	canonical	1	34828	junction_25	34194.243399636725	NA	0	NA	TRUE	NA	NA	NA	C	coding	913	2742	122	2863	20.0	0	True	AATAAA	-22
PB.11711.2	chr9	-	6566	25	novel_in_catalog	PTPN3	novel	587	2	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	34828	junction_24	35076.68036592197	NA	8	NA	TRUE	NA	NA	NA	C	coding	868	2607	107	2713	20.0	-1	True	TATAAA	-16
PB.632.5	chr1	-	3124	20	novel_not_in_catalog	TRIM33	novel	8339	20	NA	NA	-69	-14	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_19	90626.14389143775	NA	0	NA	TRUE	NA	NA	NA	B	coding	718	2157	942	3098	85.0	-27	True	AGTAAA	-26
PB.6476.4	chr2	-	5559	18	novel_not_in_catalog	PPP4R3B	novel	5243	15	NA	NA	-35	-7	any annotated donor/acceptor	FALSE	canonical	1	10137	junction_7	160069.45421708794	NA	0	NA	TRUE	NA	NA	NA	C	coding	860	2583	365	2947	30.0	-3	True	AATAAA	-11
PB.632.2	chr1	-	3182	21	novel_not_in_catalog	TRIM33	novel	8339	20	NA	NA	-54	-13	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	87601.35138185654	NA	0	NA	TRUE	NA	NA	NA	B	coding	735	2208	948	3155	90.0	-12	True	AGTAAA	-27
PB.9431.29	chr5	+	2854	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	11	769	intron_retention	FALSE	canonical	1	301445	junction_1	162468.6682725011	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-16	True	NA	NA
PB.9431.28	chr5	+	3766	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	8	-2	intron_retention	FALSE	canonical	1	2214	junction_2	302927.8693855556	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-19	True	AATAAA	-12
PB.9431.27	chr5	+	1465	6	full-splice_match	CDC42SE2	ENST00000360515.7	3591	6	8	2118	8	-534	multi-exon	FALSE	canonical	1	185505	junction_5	220300.35219182016	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-19	True	AATAAA	-23
PB.9431.26	chr5	+	2202	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	6	112	any annotated donor/acceptor	FALSE	canonical	1	301445	junction_1	162468.6682725011	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-21	True	AATAAA	-17
PB.9431.25	chr5	+	3324	5	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-1	5	intron_retention	FALSE	canonical	1	4148	junction_2	246188.72623761633	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-28	True	AATAAA	-19
PB.9431.24	chr5	+	3673	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	0	5	intron_retention	FALSE	canonical	1	2312	junction_1	308253.13504258695	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-34	True	AATAAA	-19
PB.9431.23	chr5	+	3614	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	50	junction_1	330221.0929329621	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-36	True	AATAAA	-12
PB.9431.22	chr5	+	3095	7	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	253549.26007232248	NA	4	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-38	True	AATAAA	-12
PB.9431.21	chr5	+	3840	8	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	2	5	intron_retention	FALSE	canonical	1	696	junction_1	315079.72068474273	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-38	True	AATAAA	-19
PB.9431.20	chr5	+	4225	4	incomplete-splice_match	CDC42SE2	ENST00000395246.5	3485	5	53	16	0	4	intron_retention	FALSE	canonical	1	20640	junction_1	334052.1033455044	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-40	True	AATAAA	-18
PB.11156.6	chr8	+	3406	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	22	1735	13	884	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	304	2061	20.0	-770	False	AATACA	-19
PB.10147.6	chr6	-	1739	1	novel_in_catalog	SESN1	novel	3509	10	NA	NA	4	-7874	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	128	387	92	478	80.0	0	True	AATATA	-7
PB.10147.5	chr6	-	2052	10	full-splice_match	SESN1	ENST00000356644.7	2676	10	1	623	1	-623	multi-exon	FALSE	canonical	1	96111	junction_9	63992.60237242319	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	95	1573	40.0	-3	True	AATAAA	-17
PB.4302.1	chr16	-	4070	7	novel_in_catalog	NPIPB4	novel	3606	9	NA	NA	117	45	intron_retention	FALSE	canonical	1	153	junction_6	46348.45381455567	NA	10	NA	TRUE	NA	NA	NA	A	coding	1042	3129	850	3978	75.0	NA	False	AAAACA	-19
PB.5257.2	chr17	-	3173	5	novel_in_catalog	WBP2	novel	1944	8	NA	NA	-30	0	intron_retention	FALSE	canonical	1	1421042	junction_1	209464.4417043141	NA	11	NA	TRUE	NA	NA	NA	C	coding	141	426	71	496	25.0	-33	False	AATAAA	-17
PB.10147.2	chr6	-	2640	10	full-splice_match	SESN1	ENST00000356644.7	2676	10	39	-3	39	-2	multi-exon	FALSE	canonical	1	96111	junction_9	63992.60237242319	NA	0	NA	TRUE	NA	NA	NA	C	coding	492	1479	57	1535	15.0	35	True	AATAAA	-21
PB.10147.1	chr6	-	3155	10	full-splice_match	SESN1	ENST00000436639.6	3509	10	346	8	346	-3	multi-exon	FALSE	canonical	1	84981	junction_9	67144.58467358074	NA	1	NA	TRUE	NA	NA	NA	C	coding	551	1656	401	2056	20.0	-1	True	AATAAA	-15
PB.5257.1	chr17	-	1775	8	full-splice_match	WBP2	ENST00000254806.7	1944	8	74	95	-9	-22	multi-exon	FALSE	canonical	1	1338901	junction_2	198112.78193627644	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	50	835	55.0	-12	False	TTTAAA	-23
PB.11454.1	chr9	-	2931	1	antisense	novelGene_KDM4C_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	31	96	225	320	35.0	33	False	AATAAA	-15
PB.11138.6	chr8	+	2176	13	full-splice_match	LYN	ENST00000520220.6	5808	13	-10	3642	-10	-46	multi-exon	FALSE	canonical	1	214914	junction_2	177777.62796638437	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	285	1760	45.0	-10	True	TATAAA	-15
PB.8264.5	chr3	+	1747	9	novel_in_catalog	NIT2	novel	7289	10	NA	NA	1	-4	intron_retention	FALSE	canonical	1	12478	junction_1	310938.8656655185	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	1189	1668	25.0	-15	False	ATTAAA	-11
PB.8264.4	chr3	+	945	10	full-splice_match	NIT2	ENST00000394140.8	7289	10	56	6288	0	-4	multi-exon	FALSE	canonical	1	494278	junction_1	180610.24019332725	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	36	866	25.0	0	True	ATTAAA	-11
PB.8264.3	chr3	+	1487	9	full-splice_match	NIT2	ENST00000465368.5	1469	9	-8	-10	-8	10	multi-exon	FALSE	canonical	1	494278	junction_1	187851.2509942624	NA	0	NA	TRUE	NA	NA	NA	C	coding	159	480	915	1394	10.0	-26	True	ATTAAA	-25
PB.8264.2	chr3	+	3017	9	full-splice_match	NIT2	ENST00000465368.5	1469	9	-26	-1522	12	1522	multi-exon	FALSE	canonical	1	494278	junction_1	187851.2509942624	NA	2	NA	TRUE	NA	NA	NA	C	coding	159	480	933	1412	10.0	-44	True	NA	NA
PB.8264.1	chr3	+	2523	10	full-splice_match	NIT2	ENST00000394140.8	7289	10	3	4763	3	1521	multi-exon	FALSE	canonical	1	494278	junction_1	180610.24019332725	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	89	919	10.0	-53	True	NA	NA
PB.11156.9	chr8	+	4739	5	full-splice_match	YTHDF3	ENST00000539294.5	5163	5	71	353	3	-12	multi-exon	FALSE	canonical	1	308320	junction_2	70981.70439055053	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	255	2012	70.0	-19	True	AAAACA	-7
PB.7.4	chr1	-	2769	19	novel_not_in_catalog	NOC2L	novel	1611	5	NA	NA	-6	0	any annotated donor/acceptor	FALSE	canonical	1	91	junction_1	234318.0586980606	NA	2	1	TRUE	NA	NA	NA	B	coding	716	2151	23	2173	15.0	-7	True	AATAAA	-28
PB.11138.4	chr8	+	2938	13	full-splice_match	LYN	ENST00000519728.5	2297	13	161	-802	139	802	multi-exon	FALSE	canonical	1	341846	junction_2	156622.7227620875	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	136	1674	35.0	-8386	False	AATACA	-9
PB.8038.10	chr3	+	2857	16	full-splice_match	CTNNB1	ENST00000396185.8	3472	16	108	507	-3	-3	multi-exon	FALSE	canonical	1	823716	junction_15	616922.6309788718	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	223	2568	35.0	-8	True	NA	NA
PB.11138.5	chr8	+	2854	13	full-splice_match	LYN	ENST00000520220.6	5808	13	164	2790	164	806	multi-exon	FALSE	canonical	1	214914	junction_2	177777.62796638437	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	111	1586	25.0	-8361	False	AATACA	-13
PB.979.9	chr1	+	4403	28	novel_in_catalog	DHX9	novel	4240	28	NA	NA	-52	1	intron_retention	FALSE	canonical	1	21591	junction_1	313468.5452385933	NA	0	NA	TRUE	NA	NA	NA	C	coding	1270	3813	277	4089	15.0	-7	True	AATAAA	-13
PB.354.2	chr1	+	3463	22	full-splice_match	KDM4A	ENST00000372396.3	4474	22	1	1010	1	-1010	multi-exon	FALSE	canonical	1	133986	junction_1	80858.8783372	NA	1	NA	TRUE	NA	NA	NA	C	coding	1064	3195	134	3328	20.0	1	True	AAAAAG	-27
PB.8818.9	chr4	-	2651	11	full-splice_match	RASSF6	ENST00000307439.9	5994	11	115	3228	-16	-207	multi-exon	FALSE	canonical	1	33579	junction_2	6752.479334289	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	181	1194	65.0	-10	True	AATAGA	-37
PB.167.2	chr1	-	2450	10	novel_in_catalog	GALE	novel	1801	10	NA	NA	-4	0	intron_retention	FALSE	canonical	1	276031	junction_9	97921.56233208065	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	1507	2100	20.0	-4	True	AATAAA	-22
PB.9955.9	chr6	+	4332	6	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-40	159	no_combination_of_known_junctions	FALSE	canonical	1	5050	junction_1	161426.00851040083	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	147	971	85.0	0	True	NA	NA
PB.9955.8	chr6	+	4374	7	full-splice_match	KCTD20	ENST00000536244.5	5345	7	200	771	-40	-5	multi-exon	FALSE	canonical	1	54622	junction_2	137049.56667500106	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	353	1177	70.0	0	True	NA	NA
PB.9955.7	chr6	+	4538	7	full-splice_match	KCTD20	ENST00000536244.5	5345	7	200	607	-40	159	multi-exon	FALSE	canonical	1	54622	junction_2	137049.56667500106	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	353	1177	85.0	0	True	NA	NA
PB.9955.6	chr6	+	4588	6	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-40	159	no_combination_of_known_junctions	FALSE	canonical	1	15368	junction_3	151106.52112387473	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	706	1227	85.0	0	True	NA	NA
PB.9955.5	chr6	+	5045	10	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	-62	159	no_combination_of_known_junctions	TRUE	canonical	1	451	junction_2	183792.76949674584	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	425	1684	85.0	6	True	NA	NA
PB.9955.4	chr6	+	4136	4	full-splice_match	KCTD20	ENST00000474988.5	1618	4	-78	-2440	-68	159	multi-exon	TRUE	canonical	1	2981	junction_1	181974.05158062142	NA	1	NA	TRUE	NA	NA	NA	C	coding	173	522	254	775	85.0	0	True	NA	NA
PB.9955.3	chr6	+	4835	9	novel_in_catalog	KCTD20	novel	5619	8	NA	NA	4	159	combination_of_known_junctions	FALSE	canonical	1	5629	junction_1	167985.87974695783	NA	0	NA	TRUE	NA	NA	NA	C	coding	419	1260	215	1474	85.0	42	True	NA	NA
PB.9955.2	chr6	+	5098	7	full-splice_match	KCTD20	ENST00000536244.5	5345	7	246	1	1	-1	multi-exon	FALSE	canonical	1	54622	junction_2	137049.56667500106	NA	2	NA	TRUE	NA	NA	NA	C	coding	274	825	307	1131	5.0	13	True	AATAAA	-15
PB.9955.1	chr6	+	4667	7	incomplete-splice_match	KCTD20	ENST00000373731.6	5619	8	27285	607	27014	159	5prime_fragment	FALSE	canonical	1	348631	junction_2	35110.17177598094	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	47	1306	85.0	NA	False	NA	NA
PB.979.8	chr1	+	4585	29	novel_in_catalog	DHX9	novel	4240	28	NA	NA	-98	0	intron_retention	FALSE	canonical	1	21591	junction_1	343648.4456734611	NA	0	NA	TRUE	NA	NA	NA	C	coding	1056	3171	1102	4272	20.0	-82	False	AATAAA	-12
PB.669.3	chr1	-	3061	1	full-splice_match	LINC01145	ENST00000621033.1	3389	1	322	6	322	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	169	510	1854	2363	40.0	NA	False	NA	NA
PB.669.2	chr1	-	3153	4	novel_in_catalog	LINC01145	novel	2307	2	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	2183	2515	25.0	NA	False	NA	NA
PB.669.1	chr1	-	3306	4	novel_not_in_catalog	LINC01145	novel	2307	2	NA	NA	-5	0	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	110	333	2192	2524	30.0	NA	False	NA	NA
PB.167.1	chr1	-	1493	12	full-splice_match	GALE	ENST00000617979.4	1566	12	43	30	0	-25	multi-exon	FALSE	canonical	1	276031	junction_11	97980.71128341183	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	127	1173	60.0	-8	True	NA	NA
PB.669.6	chr1	-	3802	2	incomplete-splice_match	LINC01145	ENST00000418192.2	277	3	-250	10100	62	-10100	3prime_fragment	FALSE	canonical	1	61	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	52	159	271	429	75.0	NA	False	TTTAAA	-27
PB.669.5	chr1	-	4910	1	genic	LINC01145	novel	NA	NA	NA	NA	-138	-10099	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	41	126	265	390	80.0	NA	False	TTTAAA	-28
PB.669.4	chr1	-	2765	1	novel_in_catalog	LINC01145	novel	1015	3	NA	NA	7459	-4335	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	ATTAAA	-25
PB.7043.42	chr2	-	2890	6	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	227	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	665442.0216702879	NA	1	NA	TRUE	NA	NA	NA	C	coding	247	744	211	954	50.0	-1	True	NA	NA
PB.354.3	chr1	+	1767	2	incomplete-splice_match	KDM4A	ENST00000372396.3	4474	22	-24	50731	-24	-12237	3prime_fragment	FALSE	canonical	1	133986	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	70.0	-2	True	AGTAAA	-17
PB.6584.10	chr2	-	2405	1	novel_in_catalog	GCFC2	novel	4440	17	NA	NA	7	-6734	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	196	591	138	728	100.0	1127	False	NA	NA
PB.1794.1	chr11	-	3936	3	full-splice_match	MRPL17	ENST00000288937.6	1969	3	63	-2030	-22	2030	multi-exon	FALSE	canonical	1	1684408	junction_1	999.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	43	570	100.0	-30	True	NA	NA
PB.1794.2	chr11	-	2318	3	full-splice_match	MRPL17	ENST00000288937.6	1969	3	68	-417	-17	417	multi-exon	FALSE	canonical	1	1684408	junction_1	999.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	124	375	191	565	40.0	-25	True	NA	NA
PB.1794.3	chr11	-	1957	3	full-splice_match	MRPL17	ENST00000288937.6	1969	3	21	-9	21	9	multi-exon	FALSE	canonical	1	1684408	junction_1	999.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	175	528	85	612	40.0	-72	False	AATAAA	-20
PB.2526.1	chr12	+	2008	12	full-splice_match	FAR2	ENST00000536681.7	3616	12	69	1539	16	4	multi-exon	FALSE	canonical	1	97933	junction_6	23894.994195506843	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	178	1725	15.0	-9	True	ATTAAA	-21
PB.2526.2	chr12	+	3530	12	full-splice_match	FAR2	ENST00000536681.7	3616	12	82	4	29	-4	multi-exon	FALSE	canonical	1	97933	junction_6	23894.994195506843	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	165	1712	15.0	4	True	AATAAA	-14
PB.2526.3	chr12	+	2125	12	full-splice_match	FAR2	ENST00000536681.7	3616	12	76	1415	23	128	multi-exon	FALSE	canonical	1	97933	junction_6	23894.994195506843	NA	0	NA	TRUE	NA	NA	NA	C	coding	515	1548	171	1718	70.0	-2	True	NA	NA
PB.7043.41	chr2	-	2204	10	novel_not_in_catalog	SERPINE2	novel	2161	9	NA	NA	2	-121	any annotated donor/acceptor	FALSE	canonical	1	138	junction_9	798107.1420706451	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	418	1611	20.0	-1	True	AATAAA	-17
PB.11080.6	chr8	-	2335	5	full-splice_match	FUT10	ENST00000327671.9	3825	5	257	1233	-31	22	multi-exon	FALSE	canonical	1	58070	junction_4	30736.177315990353	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	376	1815	35.0	39	False	AATAAA	-39
PB.3811.4	chr15	-	7785	47	full-splice_match	UBR1	ENST00000290650.8	7761	47	-35	11	-23	-11	multi-exon	TRUE	canonical	1	72527	junction_14	24478.806766096088	NA	0	NA	TRUE	NA	NA	NA	C	coding	1749	5250	115	5364	60.0	0	True	AATAAA	-17
PB.3811.6	chr15	-	2504	1	incomplete-splice_match	UBR1	ENST00000290650.8	7761	47	160689	12	5162	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	NA	False	AATAAA	-16
PB.3811.7	chr15	-	3115	28	incomplete-splice_match	UBR1	ENST00000546274.6	3332	29	3	1439	3	-1439	3prime_fragment	FALSE	canonical	1	102314	junction_18	24985.187044503673	NA	0	NA	TRUE	NA	NA	NA	C	coding	1009	3027	89	3115	40.0	-4	True	NA	NA
PB.11080.4	chr8	-	3661	5	full-splice_match	FUT10	ENST00000327671.9	3825	5	276	-112	-12	112	multi-exon	FALSE	canonical	1	58070	junction_4	30736.177315990353	NA	0	NA	TRUE	NA	NA	NA	C	coding	479	1440	357	1796	30.0	-30	True	CATAAA	-11
PB.3972.1	chr15	-	1412	11	full-splice_match	UBL7	ENST00000395081.6	1427	11	16	-1	-11	1	multi-exon	TRUE	canonical	1	229086	junction_10	222050.03733717315	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	156	1298	10.0	-27	True	AATATA	-19
PB.3972.2	chr15	-	1315	11	full-splice_match	UBL7	ENST00000361351.8	1360	11	45	0	4	0	multi-exon	FALSE	canonical	1	174695	junction_10	236383.19915985994	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	60	1202	10.0	-2	True	AATATA	-18
PB.11700.34	chr9	+	2678	10	incomplete-splice_match	SLC44A1	ENST00000470972.5	10433	17	113722	6916	2427	-5588	intron_retention	FALSE	canonical	1	339508	junction_9	76063.15812825842	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1296	9	1304	100.0	-8609	False	AATACA	-11
PB.10451.7	chr7	-	2981	1	novel_in_catalog	SKAP2	novel	3998	13	NA	NA	-33	-17610	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	31	96	283	378	95.0	-1	True	TATAAA	-19
PB.10451.6	chr7	-	1752	13	full-splice_match	SKAP2	ENST00000345317.6	3998	13	212	2034	54	-2034	multi-exon	FALSE	canonical	1	251022	junction_1	40051.37102617574	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	103	1182	70.0	-1	True	NA	NA
PB.10451.5	chr7	-	2026	13	full-splice_match	SKAP2	ENST00000345317.6	3998	13	101	1871	-55	-1871	multi-exon	FALSE	canonical	1	251022	junction_1	40051.37102617574	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	214	1293	65.0	-5	True	TTTAAA	-8
PB.10451.4	chr7	-	1696	13	novel_not_in_catalog	SKAP2	novel	3998	13	NA	NA	-31	-1620	any annotated donor/acceptor	FALSE	canonical	1	2392	junction_1	93557.20171055631	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	190	1269	95.0	1	True	NA	NA
PB.7386.13	chr20	+	2170	15	novel_not_in_catalog	NELFCD	novel	2305	15	NA	NA	1	-19	intron_retention	FALSE	canonical	0	0	junction_8	335826.8942687647	NA	4	1	TRUE	NA	NA	NA	C	coding	574	1725	8	1732	15.0	11	True	AGTAAA	-15
PB.3423.3	chr14	-	2040	11	full-splice_match	L2HGDH	ENST00000421284.7	1958	11	1	-83	1	83	multi-exon	FALSE	canonical	1	34553	junction_1	22349.364692536565	NA	1	NA	TRUE	NA	NA	NA	C	coding	463	1392	79	1470	65.0	-3	True	ATTAAA	-14
PB.7386.11	chr20	+	2227	15	full-splice_match	NELFCD	ENST00000602795.5	2305	15	58	20	-9	-20	multi-exon	FALSE	canonical	1	483042	junction_1	243784.11675107558	NA	0	NA	TRUE	NA	NA	NA	C	coding	590	1773	18	1790	15.0	1	True	AGTAAA	-14
PB.7386.10	chr20	+	2698	14	novel_in_catalog	NELFCD	novel	2305	15	NA	NA	8	-21	intron_retention	FALSE	canonical	1	483042	junction_1	252785.01885912757	NA	11	NA	TRUE	NA	NA	NA	C	coding	361	1086	1177	2262	10.0	-5	True	AGTAAA	-13
PB.1958.2	chr11	-	3910	1	full-splice_match	MPEG1	ENST00000361050.3	4442	1	-26	558	-26	-558	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	716	2151	113	2263	5.0	1	True	ATTAAA	-20
PB.2015.11	chr11	+	4161	7	full-splice_match	NAA40	ENST00000338447.10	4707	7	39	507	2	-507	multi-exon	FALSE	canonical	1	131612	junction_1	54070.61379550099	NA	9	NA	TRUE	NA	NA	NA	C	coding	154	465	1364	1828	65.0	-4	True	NA	NA
PB.1958.1	chr11	-	4416	1	full-splice_match	MPEG1	ENST00000361050.3	4442	1	24	2	24	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	716	2151	63	2213	45.0	-1	True	ATTAAA	-17
PB.2550.7	chr12	-	2182	1	novel_in_catalog	GXYLT1	novel	7497	8	NA	NA	2	-55384	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-11	True	NA	NA
PB.2550.6	chr12	-	2019	7	full-splice_match	GXYLT1	ENST00000280876.6	1937	7	0	-82	0	82	multi-exon	FALSE	canonical	1	30084	junction_6	41390.80903111221	NA	1	NA	TRUE	NA	NA	NA	C	coding	409	1230	67	1296	35.0	-13	True	ATTAAA	-14
PB.2550.5	chr12	-	2335	8	full-splice_match	GXYLT1	ENST00000398675.7	7497	8	-52	5214	-52	86	multi-exon	FALSE	canonical	1	17752	junction_7	44008.349602022994	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	286	1608	45.0	-58	False	ATTAAA	-18
PB.2550.4	chr12	-	4948	7	full-splice_match	GXYLT1	ENST00000280876.6	1937	7	-197	-2814	-30	-2486	multi-exon	FALSE	canonical	1	30084	junction_6	41390.80903111221	NA	2	NA	TRUE	NA	NA	NA	C	coding	409	1230	264	1493	75.0	-36	True	AAGAAA	-15
PB.2550.3	chr12	-	4992	8	full-splice_match	GXYLT1	ENST00000398675.7	7497	8	21	2484	21	-2484	multi-exon	TRUE	canonical	1	17752	junction_7	44008.349602022994	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	213	1535	70.0	15	True	AAGAAA	-17
PB.6967.17	chr2	-	2531	19	full-splice_match	NDUFS1	ENST00000233190.10	11819	19	148	9140	-30	-1	multi-exon	FALSE	canonical	1	480962	junction_18	196264.18197030303	NA	1	NA	TRUE	NA	NA	NA	C	coding	727	2184	120	2303	40.0	-31	True	NA	NA
PB.2550.1	chr12	-	7328	7	full-splice_match	GXYLT1	ENST00000280876.6	1937	7	-94	-5297	73	-3	multi-exon	FALSE	canonical	1	30084	junction_6	41390.80903111221	NA	2	NA	TRUE	NA	NA	NA	C	coding	409	1230	161	1390	35.0	67	False	AATAAA	-30
PB.8064.5	chr3	+	4718	7	novel_in_catalog	EXOSC7	novel	1593	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	624796	junction_4	87486.62315970876	NA	2	NA	TRUE	NA	NA	NA	C	coding	164	495	30	524	15.0	5	True	ATTAAA	-15
PB.8064.4	chr3	+	1045	8	full-splice_match	EXOSC7	ENST00000265564.7	1055	8	15	-5	-6	5	multi-exon	FALSE	canonical	1	615785	junction_5	94092.07003780924	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	34	909	15.0	1	True	ATTAAA	-20
PB.8064.7	chr3	+	2221	8	full-splice_match	EXOSC7	ENST00000265564.7	1055	8	31	-1197	-3	1	multi-exon	FALSE	canonical	1	615785	junction_5	94092.07003780924	NA	1	NA	TRUE	NA	NA	NA	C	coding	291	876	18	893	20.0	17	True	AATAAA	-22
PB.8064.6	chr3	+	4878	3	incomplete-splice_match	EXOSC7	ENST00000467846.5	1149	5	0	7998	0	4999	3prime_fragment	FALSE	canonical	1	704941	junction_1	105741.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	28	366	85.0	7	True	NA	NA
PB.8064.1	chr3	+	1464	9	full-splice_match	EXOSC7	ENST00000491476.5	1395	9	-36	-33	-2	0	multi-exon	FALSE	canonical	1	113755	junction_8	222930.99495920257	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	51	926	20.0	-16	False	AATAAA	-21
PB.8064.3	chr3	+	1843	1	novel_in_catalog	EXOSC7	novel	1593	9	NA	NA	-7	-11156	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	142	429	880	1308	75.0	0	True	NA	NA
PB.8064.2	chr3	+	8229	1	novel_in_catalog	EXOSC7	novel	1593	9	NA	NA	8	-4776	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	coding	142	429	886	1314	85.0	-6	True	NA	NA
PB.8546.4	chr3	-	2399	18	novel_in_catalog	MCCC1	novel	2545	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	1313	junction_5	89389.6120950207	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	91	2181	20.0	-11	True	AATAAA	-26
PB.8786.6	chr4	-	2682	21	novel_in_catalog	CLOCK	novel	10304	22	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	1	12837	junction_20	44511.53070258874	NA	0	NA	TRUE	NA	NA	NA	C	coding	693	2082	452	2533	30.0	-1	True	AATAAA	-13
PB.8786.4	chr4	-	3636	23	novel_in_catalog	CLOCK	novel	10304	22	NA	NA	-44	-4	combination_of_known_junctions	FALSE	canonical	1	12837	junction_22	42816.40413171874	NA	1	NA	TRUE	NA	NA	NA	C	coding	837	2514	535	3048	35.0	245	False	GATAAA	-13
PB.8786.5	chr4	-	3597	23	full-splice_match	CLOCK	ENST00000513440.5	3580	23	178	-195	-79	-4	multi-exon	FALSE	canonical	1	24540	junction_22	41618.814627521526	NA	2	NA	TRUE	NA	NA	NA	C	coding	837	2514	496	3009	35.0	-16	False	GATAAA	-13
PB.8786.2	chr4	-	5899	23	novel_in_catalog	CLOCK	novel	10304	22	NA	NA	18	-17	combination_of_known_junctions	TRUE	canonical	1	12837	junction_22	42816.40413171874	NA	3	NA	TRUE	NA	NA	NA	C	coding	837	2514	464	2977	90.0	-13	True	AATAGA	-17
PB.8786.3	chr4	-	4295	23	full-splice_match	CLOCK	ENST00000513440.5	3580	23	297	-1012	40	813	multi-exon	FALSE	canonical	1	24540	junction_22	41618.814627521526	NA	3	NA	TRUE	NA	NA	NA	C	coding	837	2514	377	2890	40.0	103	False	AATAAA	-12
PB.8786.1	chr4	-	5916	23	full-splice_match	CLOCK	ENST00000513440.5	3580	23	193	-2529	-64	-17	multi-exon	FALSE	canonical	1	24540	junction_22	41618.814627521526	NA	2	NA	TRUE	NA	NA	NA	C	coding	837	2514	481	2994	90.0	-1	True	AATAGA	-17
PB.6967.16	chr2	-	4807	18	novel_in_catalog	NDUFS1	novel	11819	19	NA	NA	2	34	intron_retention	FALSE	canonical	1	480962	junction_17	201794.42406454956	NA	2	NA	TRUE	NA	NA	NA	C	coding	699	2100	88	2187	15.0	1	True	CATAAA	-14
PB.6896.10	chr2	+	3045	20	incomplete-splice_match	WDR75	ENST00000314761.8	2701	21	41	19	6	0	intron_retention	FALSE	canonical	1	280498	junction_11	141315.50436405622	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	20	2311	60.0	0	True	AATAAA	-23
PB.1903.25	chr11	+	3610	14	novel_not_in_catalog	API5	novel	560	4	NA	NA	17	1	any annotated donor/acceptor	FALSE	canonical	1	318	junction_1	121582.09205471983	NA	17	3	TRUE	NA	NA	NA	C	coding	493	1482	109	1590	10.0	24	True	AATAAA	-19
PB.1903.24	chr11	+	3715	14	novel_not_in_catalog	API5	novel	560	4	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	131917.14512853857	NA	3	1	TRUE	NA	NA	NA	C	coding	256	771	130	900	5.0	3	True	AATAAA	-17
PB.7047.22	chr2	+	4206	4	incomplete-splice_match	RHBDD1	ENST00000392062.6	5151	9	70693	0	-64	0	5prime_fragment	FALSE	canonical	1	157337	junction_3	28131.291936205133	NA	0	NA	TRUE	NA	NA	NA	C	coding	149	450	78	527	60.0	-7357	False	NA	NA
PB.1903.21	chr11	+	1906	14	novel_not_in_catalog	API5	novel	560	4	NA	NA	-2	35	any annotated donor/acceptor	FALSE	canonical	1	21	junction_13	127061.23645492995	NA	1	1	TRUE	NA	NA	NA	C	coding	505	1518	133	1650	15.0	0	True	NA	NA
PB.1903.20	chr11	+	2463	14	novel_in_catalog	API5	novel	560	4	NA	NA	-2	706	combination_of_known_junctions	FALSE	canonical	1	614	junction_12	124055.41101993674	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	133	1662	55.0	0	True	NA	NA
PB.1903.23	chr11	+	2807	14	novel_in_catalog	API5	novel	560	4	NA	NA	-1	1051	combination_of_known_junctions	FALSE	canonical	1	614	junction_12	124055.41101993674	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	132	1661	60.0	1	True	NA	NA
PB.1903.22	chr11	+	6913	14	novel_in_catalog	API5	novel	560	4	NA	NA	-1	1	intron_retention	FALSE	canonical	1	614	junction_12	124055.41101993674	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	132	1661	10.0	1	True	AATAAA	-19
PB.2378.3	chr11	+	5344	5	novel_in_catalog	VPS26B	novel	3691	6	NA	NA	-15	-5	intron_retention	FALSE	canonical	1	377686	junction_3	112208.69603778487	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	494	1330	15.0	-50	True	ATTAAA	-41
PB.2378.2	chr11	+	3666	6	full-splice_match	VPS26B	ENST00000281187.9	3691	6	23	2	-9	-2	multi-exon	FALSE	canonical	1	377686	junction_3	100612.3198249598	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	456	1466	10.0	-12	True	ATTAAA	-44
PB.2378.1	chr11	+	1650	6	full-splice_match	VPS26B	ENST00000281187.9	3691	6	-22	2063	-22	0	multi-exon	FALSE	canonical	1	377686	junction_3	100612.3198249598	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	501	1511	30.0	-57	True	AAAACA	-18
PB.8212.1	chr3	-	3809	8	full-splice_match	PSMD6	ENST00000295901.8	1430	8	85	-2464	-3	2464	multi-exon	FALSE	canonical	1	1236044	junction_6	221351.40807829727	NA	1	NA	TRUE	NA	NA	NA	C	coding	389	1170	57	1226	40.0	-4	True	AGTAAA	-16
PB.2378.4	chr11	+	3240	7	novel_not_in_catalog	VPS26B	novel	3691	6	NA	NA	-10	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	208092.16457991773	NA	0	NA	TRUE	NA	NA	NA	C	coding	336	1011	30	1040	10.0	-13	True	ATTAAA	-44
PB.8405.8	chr3	+	4240	11	novel_in_catalog	UBA5	novel	2850	12	NA	NA	-13	58	intron_retention	FALSE	canonical	1	157885	junction_10	141119.06389644882	NA	3	NA	TRUE	NA	NA	NA	C	coding	292	879	3289	4167	45.0	-41	True	ATTAAA	-16
PB.8405.9	chr3	+	2780	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	864	61	-13	-61	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	209	1423	25.0	-41	True	AGTAAA	-24
PB.8405.6	chr3	+	3394	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	863	-552	-14	399	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	1	NA	TRUE	NA	NA	NA	C	coding	404	1215	210	1424	25.0	-42	True	AGTAAA	-18
PB.8405.7	chr3	+	2349	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	863	493	-14	262	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	210	1424	30.0	-42	True	AATAAA	-25
PB.8405.4	chr3	+	3157	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	849	-301	5	148	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	224	1438	60.0	-594	False	ATTAAA	-23
PB.8405.5	chr3	+	1676	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	860	1169	16	22	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	213	1427	45.0	-45	True	TATAAA	-10
PB.8405.2	chr3	+	1488	12	full-splice_match	UBA5	ENST00000356232.8	3705	12	874	1343	-3	60	multi-exon	FALSE	canonical	1	157885	junction_11	137526.50564746893	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	199	1413	50.0	-31	True	ATTAAA	-18
PB.10057.3	chr6	+	2494	2	full-splice_match	AC019205.1	ENST00000441363.1	2403	2	-96	5	48	-5	multi-exon	FALSE	canonical	1	4331	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	15	True	ATTAAA	-17
PB.9667.25	chr5	+	4348	16	novel_not_in_catalog	CANX	novel	585	5	NA	NA	1	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	1895601.4097496152	NA	3	NA	TRUE	NA	NA	NA	C	coding	592	1779	289	2067	15.0	-25	True	ATTAAA	-18
PB.322.5	chr1	+	3043	11	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	-26	-5	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_3	219743.55691626092	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	595	1533	15.0	-26	True	ATTAAA	-19
PB.3666.1	chr14	+	4253	3	novel_not_in_catalog	AL845552.2	novel	553	2	NA	NA	-966	2535	any annotated donor/acceptor	FALSE	canonical	1	160	junction_1	46.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	117	354	108	461	20.0	-8555	False	NA	NA
PB.322.7	chr1	+	3172	11	novel_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	1	8349	junction_2	213033.68901692523	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	408	1661	10.0	-14	True	ATTAAA	-20
PB.10057.2	chr6	+	2284	1	novel_in_catalog	AC019205.1	novel	1083	3	NA	NA	30	-10989	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	85	258	124	381	100.0	-3	True	NA	NA
PB.322.1	chr1	+	2999	10	full-splice_match	ZMPSTE24	ENST00000372759.3	3108	10	104	5	-25	-5	multi-exon	FALSE	canonical	1	461096	junction_4	55878.78067348603	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	62	1489	15.0	-25	True	ATTAAA	-19
PB.322.3	chr1	+	3248	11	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	8	-2	any annotated donor/acceptor	FALSE	canonical	1	5468	junction_3	218952.20177618673	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	557	1735	15.0	-121	False	ATTAAA	-22
PB.6697.10	chr2	+	3806	16	full-splice_match	POLR1B	ENST00000333990.10	4376	16	257	313	-4	-43	multi-exon	FALSE	canonical	1	4787	junction_1	75140.52406033792	NA	0	NA	TRUE	NA	NA	NA	C	coding	996	2991	559	3549	20.0	-19	True	GATAAA	-12
PB.7568.13	chr21	+	2255	6	incomplete-splice_match	COL18A1	ENST00000342220.9	3386	23	15562	1	-182	0	5prime_fragment	FALSE	canonical	1	654823	junction_3	192539.22615861942	NA	1	NA	TRUE	NA	NA	NA	C	coding	301	906	29	934	20.0	-3590	False	AATAAA	-18
PB.322.9	chr1	+	2859	11	novel_not_in_catalog	ZMPSTE24	novel	3108	10	NA	NA	-7	-170	any annotated donor/acceptor	FALSE	canonical	1	1439	junction_3	219743.55691626092	NA	1	NA	TRUE	NA	NA	NA	C	coding	312	939	576	1514	25.0	-7	True	AATAAA	-25
PB.9632.11	chr5	-	2513	7	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	8898	junction_4	160442.44616346594	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	367	978	20.0	-37	True	AATAAA	-19
PB.9118.2	chr5	-	2550	1	incomplete-splice_match	SLC9A3	ENST00000644203.1	5176	16	51262	53	9584	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	113	342	648	989	20.0	14	True	ATTAAA	-14
PB.9118.3	chr5	-	1753	2	full-splice_match	PP7080	ENST00000342584.3	1876	2	122	1	-16	-1	multi-exon	FALSE	canonical	1	20582	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	104	315	42	356	20.0	0	True	ATTAAA	-14
PB.6802.42	chr2	-	2442	14	incomplete-splice_match	LY75	ENST00000263636.4	6886	35	-46	61315	-7	7149	3prime_fragment	FALSE	canonical	1	81987	junction_13	41951.524282171595	NA	1	NA	TRUE	NA	NA	NA	C	coding	735	2208	75	2282	35.0	-1	True	NA	NA
PB.9118.1	chr5	-	3341	1	genic	PP7080_SLC9A3	novel	NA	NA	NA	NA	-20	680	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	113	342	706	1047	65.0	-44	True	NA	NA
PB.6802.44	chr2	-	3028	2	full-splice_match	LY75	ENST00000471164.1	593	2	-107	-2328	-7	2144	multi-exon	FALSE	canonical	1	1464	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	86	261	75	335	30.0	-1	True	NA	NA
PB.9568.1	chr5	+	1550	2	full-splice_match	SMIM3	ENST00000526627.1	2332	2	783	-1	-76	1	multi-exon	FALSE	canonical	1	408044	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	32	99	260	358	15.0	-3743	False	AATAAA	-15
PB.9118.4	chr5	-	2402	1	incomplete-splice_match	SLC9A3	ENST00000644203.1	5176	16	51230	233	9552	-233	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	113	342	680	1021	35.0	-18	True	TTTAAA	-10
PB.9118.5	chr5	-	2280	1	incomplete-splice_match	SLC9A3	ENST00000644203.1	5176	16	51232	353	9554	-353	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	113	342	678	1019	15.0	-16	True	TATAAA	-18
PB.9821.3	chr6	+	2041	7	novel_not_in_catalog	AL021997.3	novel	557	4	NA	NA	14413	19892	any annotated donor/acceptor	FALSE	canonical	1	30171	junction_1	15104.186146194337	NA	0	NA	TRUE	NA	NA	NA	B	coding	539	1617	424	2040	35.0	-3	True	AATAAA	-26
PB.9821.2	chr6	+	3004	7	novel_not_in_catalog	AL021997.3	novel	557	4	NA	NA	14393	20835	any annotated donor/acceptor	FALSE	canonical	1	30171	junction_1	15104.186146194337	NA	0	NA	TRUE	NA	NA	NA	B	coding	809	2430	444	2873	40.0	-58	False	ATTAAA	-20
PB.9821.1	chr6	+	3034	7	novel_not_in_catalog	AL021997.3	novel	557	4	NA	NA	14452	20924	any annotated donor/acceptor	FALSE	canonical	1	30171	junction_1	15104.186146194337	NA	0	NA	TRUE	NA	NA	NA	B	coding	809	2430	385	2814	25.0	1	True	NA	NA
PB.9667.22	chr5	+	3241	15	full-splice_match	CANX	ENST00000247461.8	4260	15	75	944	-3	332	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	126	1904	25.0	-1	True	AATAAA	-25
PB.9821.4	chr6	+	2022	7	full-splice_match	PGBD1	ENST00000259883.3	3100	7	1	1077	1	-1077	multi-exon	FALSE	canonical	1	15988	junction_1	20169.324728408734	NA	0	NA	TRUE	NA	NA	NA	A	coding	539	1617	405	2021	35.0	1	True	AATAAA	-26
PB.4163.8	chr16	-	2766	1	full-splice_match	AC005363.1	ENST00000530779.1	351	1	-733	-1682	-733	1682	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	114	345	1812	2156	5.0	-3	True	AATAAA	-13
PB.12225.1	chrX	-	5182	7	novel_not_in_catalog	AMOT	novel	7319	11	NA	NA	21098	-425	any annotated donor/acceptor	FALSE	canonical	1	562	junction_6	37570.88831647302	NA	0	NA	TRUE	NA	NA	NA	A	coding	479	1440	104	1543	15.0	-1	True	AATAAA	-20
PB.4163.3	chr16	-	1565	7	novel_in_catalog	RPS2	novel	985	7	NA	NA	-13	0	intron_retention	FALSE	canonical	1	2936	junction_4	1701669.1215282732	NA	1	1	TRUE	NA	NA	NA	C	coding	184	555	974	1528	5.0	-1	True	AATAAA	-15
PB.4163.2	chr16	-	2280	4	novel_in_catalog	RPS2	novel	985	7	NA	NA	-13	0	intron_retention	FALSE	canonical	1	20998	junction_2	26881.50771234547	NA	3	NA	TRUE	NA	NA	NA	C	coding	116	351	24	374	5.0	-1	True	AATAAA	-16
PB.4163.1	chr16	-	1122	6	incomplete-splice_match	RPS2	ENST00000343262.8	985	7	34	7	-13	1	intron_retention	FALSE	canonical	1	20998	junction_5	1696383.3924725389	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	202	1083	5.0	-1	True	AATAAA	-17
PB.9632.10	chr5	-	2549	7	novel_in_catalog	KIAA1191	novel	2991	9	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	10442	junction_5	161959.28906364093	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	340	1014	20.0	-33	True	AATAAA	-19
PB.4163.7	chr16	-	1963	6	novel_in_catalog	RPS2	novel	985	7	NA	NA	-15	0	intron_retention	FALSE	canonical	1	20998	junction_4	1763890.3536060965	NA	3	NA	TRUE	NA	NA	NA	C	coding	215	648	1279	1926	5.0	-3	True	AATAAA	-15
PB.4163.6	chr16	-	2506	3	novel_in_catalog	RPS2	novel	985	7	NA	NA	-14	0	intron_retention	FALSE	canonical	1	20998	junction_1	2975.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	116	351	25	375	5.0	-2	True	AATAAA	-15
PB.4163.5	chr16	-	2540	2	incomplete-splice_match	RPS2	ENST00000533161.5	1186	5	-13	0	-13	0	intron_retention	FALSE	canonical	1	80764	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	114	345	1810	2154	5.0	-1	True	AATAAA	-15
PB.4163.4	chr16	-	942	7	full-splice_match	RPS2	ENST00000343262.8	985	7	34	9	-13	0	multi-exon	FALSE	canonical	1	20998	junction_5	1652142.7949186089	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	24	905	5.0	-1	True	AATAAA	-15
PB.3610.7	chr14	+	2070	16	full-splice_match	TDP1	ENST00000393454.6	2068	16	-2	0	-2	0	multi-exon	FALSE	canonical	1	73695	junction_1	62370.03638379215	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	43	1869	30.0	1	True	AATAAA	-19
PB.3610.6	chr14	+	3177	3	incomplete-splice_match	TDP1	ENST00000393452.7	2370	18	26	77323	-10	2419	3prime_fragment	FALSE	canonical	1	33885	junction_1	25943.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	200	603	274	876	20.0	-7	True	ATTAAA	-15
PB.3610.5	chr14	+	3501	16	full-splice_match	TDP1	ENST00000393454.6	2068	16	-11	-1422	-11	-2	multi-exon	FALSE	canonical	1	73695	junction_1	62370.03638379215	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	52	1878	30.0	-8	True	AATAAA	-20
PB.3610.4	chr14	+	3884	18	novel_in_catalog	TDP1	novel	3040	18	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	1	3767	junction_8	102943.28031157721	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	278	1174	35.0	-11	True	AATAAA	-14
PB.3610.3	chr14	+	6967	1	novel_in_catalog	TDP1	novel	3040	18	NA	NA	0	-679	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-28	True	NA	NA
PB.3610.2	chr14	+	2328	17	full-splice_match	TDP1	ENST00000335725.8	3702	17	-45	1419	-1	5	multi-exon	FALSE	canonical	1	33885	junction_1	77297.3466936285	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	296	2122	45.0	-29	True	AATAAA	-24
PB.3610.1	chr14	+	3749	17	full-splice_match	TDP1	ENST00000335725.8	3702	17	-45	-2	-1	2	multi-exon	FALSE	canonical	1	33885	junction_1	77297.3466936285	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	296	2122	30.0	-29	True	AATAAA	-24
PB.11696.2	chr9	+	5378	25	full-splice_match	SMC2	ENST00000286398.11	5992	25	14	600	14	-600	multi-exon	FALSE	canonical	1	1446	junction_1	76724.77563288581	NA	1	NA	TRUE	NA	NA	NA	C	coding	1197	3594	291	3884	35.0	-370	False	ATTAAA	-14
PB.4022.1	chr15	-	3476	1	full-splice_match	AC015871.3	ENST00000618835.1	2261	1	-1301	86	-1301	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	45.0	-89	True	NA	NA
PB.9667.23	chr5	+	3696	15	full-splice_match	CANX	ENST00000247461.8	4260	15	95	469	13	-469	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	106	1884	30.0	19	True	AATAAA	-24
PB.3610.9	chr14	+	2228	15	novel_in_catalog	TDP1	novel	3040	18	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	1	14498	junction_14	93149.725120696	NA	0	NA	TRUE	NA	NA	NA	C	coding	578	1737	314	2050	20.0	38	True	AATAAA	-15
PB.3610.8	chr14	+	2879	16	novel_in_catalog	TDP1	novel	3040	18	NA	NA	8	6	intron_retention	FALSE	canonical	1	85772	junction_1	60224.214713205045	NA	0	NA	TRUE	NA	NA	NA	C	coding	608	1827	846	2672	45.0	28	True	AATAAA	-25
PB.4271.19	chr16	+	2724	8	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	424	843	intron_retention	TRUE	non_canonical	0	0	junction_1	159948.72759884587	NA	1	NA	TRUE	NA	NA	NA	C	coding	203	612	1230	1841	85.0	-9438	False	NA	NA
PB.4271.18	chr16	+	2214	11	novel_in_catalog	NDE1	novel	3936	10	NA	NA	4	843	intron_retention	FALSE	canonical	1	8183	junction_1	171383.78051522264	NA	2	NA	TRUE	NA	NA	NA	C	coding	346	1041	198	1238	85.0	14	True	NA	NA
PB.1920.1	chr11	+	2228	5	full-splice_match	ZNF408	ENST00000311764.2	2442	5	213	1	0	-1	multi-exon	TRUE	canonical	1	90260	junction_2	24567.93401977464	NA	0	NA	TRUE	NA	NA	NA	C	coding	720	2163	18	2180	10.0	0	True	CATAAA	-16
PB.4271.15	chr16	+	2702	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	2	1408	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	159146.0296022896	NA	13	2	TRUE	NA	NA	NA	C	coding	319	960	90	1049	45.0	2	True	AATAAA	-1
PB.4271.14	chr16	+	1982	9	full-splice_match	NDE1	ENST00000396354.5	3221	9	20	1219	0	843	multi-exon	FALSE	canonical	1	108777	junction_8	112891.43581418168	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	92	1099	85.0	0	True	NA	NA
PB.4271.17	chr16	+	1924	9	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	4	843	intron_retention	FALSE	canonical	1	15147	junction_1	184650.9160935507	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	186	1223	85.0	4	True	NA	NA
PB.4271.16	chr16	+	2076	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	4	843	intron_retention	FALSE	canonical	1	15147	junction_1	163017.27324359765	NA	1	NA	TRUE	NA	NA	NA	C	coding	335	1008	186	1193	85.0	4	True	NA	NA
PB.4271.11	chr16	+	2801	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-2	1422	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	141693.0365756366	NA	3	NA	TRUE	NA	NA	NA	C	coding	346	1041	94	1134	15.0	-2	True	AATAAA	-15
PB.4271.10	chr16	+	2329	10	novel_not_in_catalog	NDE1	novel	3936	10	NA	NA	-7	1421	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	141693.0365756366	NA	2	1	TRUE	NA	NA	NA	C	coding	346	1041	99	1139	20.0	-7	True	AATAAA	-14
PB.4271.13	chr16	+	2063	10	novel_in_catalog	NDE1	novel	3936	10	NA	NA	0	842	intron_retention	FALSE	canonical	1	4098	junction_3	159217.42775451887	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	570	1181	85.0	0	True	NA	NA
PB.2995.1	chr12	+	2739	1	antisense	novelGene_SBNO1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.10799.1	chr7	+	2559	2	full-splice_match	CAV1	ENST00000393467.1	2628	2	69	0	69	0	multi-exon	FALSE	canonical	1	3928426	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	147	444	227	670	35.0	0	True	AATAAA	-15
PB.10799.2	chr7	+	2422	3	full-splice_match	CAV1	ENST00000393468.1	845	3	85	-1662	69	-1	multi-exon	FALSE	canonical	1	78361	junction_1	1925032.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	91	534	35.0	0	True	AATAAA	-14
PB.11696.4	chr9	+	5658	25	novel_in_catalog	SMC2	novel	5992	25	NA	NA	-10	-254	no_combination_of_known_junctions	FALSE	canonical	1	49312	junction_1	68723.8835697585	NA	1	NA	TRUE	NA	NA	NA	C	coding	1197	3594	225	3818	15.0	-35	True	NA	NA
PB.6639.1	chr2	-	2465	9	full-splice_match	LMAN2L	ENST00000434524.5	2410	9	-12	-43	10	-3	multi-exon	FALSE	canonical	1	12201	junction_6	90641.81179364397	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	509	1141	30.0	10	True	AATGAA	-25
PB.8038.12	chr3	+	3794	16	full-splice_match	CTNNB1	ENST00000644678.1	3321	16	86	-559	0	1	multi-exon	FALSE	canonical	1	28597	junction_2	957669.5353470575	NA	2	NA	TRUE	NA	NA	NA	C	coding	770	2313	380	2692	10.0	0	True	ATTAAA	-16
PB.9667.21	chr5	+	3497	15	full-splice_match	CANX	ENST00000452673.6	4207	15	39	671	1	605	multi-exon	FALSE	canonical	1	166870	junction_1	1483944.3020155623	NA	1	NA	TRUE	NA	NA	NA	C	coding	592	1779	109	1887	40.0	-37	True	AATATA	-6
PB.8355.9	chr3	-	3434	13	novel_in_catalog	CCDC14	novel	374	2	NA	NA	0	-4	intron_retention	FALSE	canonical	1	26966	junction_1	151981.93963593175	NA	0	NA	TRUE	NA	NA	NA	C	coding	762	2289	88	2376	15.0	-32	True	ATTAAA	-19
PB.7027.2	chr2	-	3639	1	novel_in_catalog	TUBA4A	novel	2162	4	NA	NA	-2	449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	347	1044	2524	3567	5.0	-1	True	AATAAA	-18
PB.7027.1	chr2	-	1428	4	full-splice_match	TUBA4A	ENST00000248437.8	2162	4	111	623	-5	395	multi-exon	FALSE	canonical	1	1184340	junction_3	271725.16413505434	NA	0	NA	TRUE	NA	NA	NA	C	coding	448	1347	64	1410	30.0	-4	True	AATAAA	-18
PB.1248.1	chr1	-	2774	4	full-splice_match	ZNF124	ENST00000543802.2	1292	4	-52	-1430	-3	911	multi-exon	FALSE	canonical	1	29160	junction_1	53363.720399620644	NA	1	NA	TRUE	NA	NA	NA	C	coding	351	1056	143	1198	25.0	NA	False	NA	NA
PB.7027.5	chr2	-	1882	4	full-splice_match	TUBA4A	ENST00000427737.5	940	4	-115	-827	-115	443	multi-exon	FALSE	canonical	1	2639	junction_3	811168.3001461534	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	515	1816	5.0	1536	False	AATAAA	-12
PB.7027.4	chr2	-	1715	3	full-splice_match	TUBA4A	ENST00000462806.5	804	3	-2	-909	-2	444	multi-exon	FALSE	canonical	1	1184340	junction_2	331643.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	605	1648	5.0	-1	True	AATAAA	-13
PB.4777.2	chr17	+	3624	10	full-splice_match	MAP2K4	ENST00000602811.5	1136	10	-41	-2447	0	-1	multi-exon	FALSE	canonical	1	7975	junction_1	55463.17508441475	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	310	1155	25.0	-48	True	AATAAA	-14
PB.4777.3	chr17	+	1942	11	full-splice_match	MAP2K4	ENST00000353533.9	3826	11	5	1879	0	323	multi-exon	FALSE	canonical	1	4167	junction_2	54435.41940584274	NA	0	NA	TRUE	NA	NA	NA	C	coding	399	1200	59	1258	15.0	-48	True	ATTAAA	-16
PB.417.3	chr1	-	2735	6	novel_in_catalog	C1orf123	novel	1085	8	NA	NA	-10	-30	intron_retention	FALSE	canonical	1	457287	junction_5	152161.01956151583	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	-24	True	ATTAAA	-15
PB.4777.1	chr17	+	3729	11	full-splice_match	MAP2K4	ENST00000353533.9	3826	11	7	90	2	3	multi-exon	FALSE	canonical	1	4167	junction_2	54435.41940584274	NA	1	NA	TRUE	NA	NA	NA	C	coding	399	1200	57	1256	20.0	-46	True	AATAAA	-18
PB.1038.1	chr1	+	2509	9	full-splice_match	ELF3	ENST00000367284.9	3179	9	2	668	2	511	multi-exon	TRUE	canonical	1	346780	junction_1	102997.36633397175	NA	2	NA	TRUE	NA	NA	NA	C	coding	371	1116	197	1312	95.0	-273	False	NA	NA
PB.4777.4	chr17	+	3506	10	full-splice_match	MAP2K4	ENST00000602375.5	1064	10	7	-2449	7	1	multi-exon	FALSE	canonical	1	9579	junction_2	56263.981830582336	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	292	1035	20.0	0	True	AATAAA	-16
PB.10531.5	chr7	-	2405	4	novel_in_catalog	SNHG15	novel	3116	2	NA	NA	-2	3	intron_retention	FALSE	canonical	1	674341	junction_2	41505.20086286376	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	166	False	AATAAA	-12
PB.286.4	chr1	+	3457	19	full-splice_match	AGO3	ENST00000373191.8	19687	19	191	16039	11	-1	multi-exon	FALSE	canonical	1	61469	junction_6	22367.887580037812	NA	2	NA	TRUE	NA	NA	NA	C	coding	835	2508	234	2741	25.0	17	True	TATAAA	-13
PB.10531.6	chr7	-	1611	3	full-splice_match	SNHG15	ENST00000582727.1	1039	3	10	-582	4	1	multi-exon	FALSE	canonical	1	540507	junction_1	71346.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-12	True	AATAAA	-10
PB.286.1	chr1	+	3221	20	novel_in_catalog	AGO3	novel	1726	7	NA	NA	0	-135	combination_of_known_junctions	FALSE	canonical	1	6740	junction_1	29486.924218960798	NA	0	NA	TRUE	NA	NA	NA	C	coding	835	2508	355	2862	50.0	0	True	AGTAAA	-20
PB.11696.7	chr9	+	5576	25	full-splice_match	SMC2	ENST00000374793.7	5909	25	-29	362	1	-354	multi-exon	FALSE	canonical	1	98609	junction_1	60956.737129007575	NA	1	NA	TRUE	NA	NA	NA	C	coding	1197	3594	243	3836	35.0	-24	True	ATTAAA	-15
PB.1956.1	chr11	-	2169	4	incomplete-splice_match	FAM111A-DT	ENST00000501817.6	2110	5	24	3840	24	1317	3prime_fragment	FALSE	canonical	1	13525	junction_3	4609.413580441177	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	AATAAA	-28
PB.1956.2	chr11	-	5366	2	novel_in_catalog	FAM111A-DT	novel	2110	5	NA	NA	42	389	intron_retention	FALSE	canonical	1	13525	junction_1	0.0	NA	20	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	NA	NA
PB.7046.1	chr2	-	6591	1	genic	IRS1	novel	NA	NA	NA	NA	-1	-1032	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	11	NA	NA	NA	NA	NA	A	coding	1242	3729	1023	4751	45.0	11	True	AATAAA	-20
PB.980.7	chr1	+	2105	8	incomplete-splice_match	LAMC1	ENST00000258341.4	7889	28	-26	28431	-26	175	3prime_fragment	FALSE	canonical	1	716264	junction_2	125521.03484488413	NA	0	NA	TRUE	NA	NA	NA	C	coding	541	1626	284	1909	25.0	0	True	AATAAA	-27
PB.980.6	chr1	+	4191	23	incomplete-splice_match	LAMC1	ENST00000258341.4	7889	28	-28	10876	-28	1178	3prime_fragment	FALSE	canonical	1	693044	junction_8	197391.68848900215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1302	3906	286	4191	55.0	-2	True	CATAAA	-38
PB.980.5	chr1	+	2424	2	incomplete-splice_match	LAMC1	ENST00000258341.4	7889	28	-30	40546	-30	-5585	3prime_fragment	FALSE	canonical	1	730206	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	288	1034	90.0	-4	True	NA	NA
PB.10531.3	chr7	-	3642	1	novel_in_catalog	SNHG15	novel	982	5	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-15	True	AATAAA	-17
PB.980.3	chr1	+	5119	28	full-splice_match	LAMC1	ENST00000258341.4	7889	28	501	2269	501	-2269	multi-exon	FALSE	canonical	1	693044	junction_8	203864.51252199317	NA	0	NA	TRUE	NA	NA	NA	C	coding	1487	4464	123	4586	25.0	362	False	AATAAA	-16
PB.980.2	chr1	+	4710	26	incomplete-splice_match	LAMC1	ENST00000258341.4	7889	28	-39	7824	-39	-137	3prime_fragment	TRUE	canonical	1	693044	junction_8	196054.73692680828	NA	0	NA	TRUE	NA	NA	NA	C	coding	1471	4413	297	4709	70.0	-13	True	NA	NA
PB.980.1	chr1	+	4714	28	full-splice_match	LAMC1	ENST00000258341.4	7889	28	607	2568	607	-2568	multi-exon	FALSE	canonical	1	693044	junction_8	203864.51252199317	NA	0	NA	TRUE	NA	NA	NA	C	coding	1487	4464	17	4480	20.0	468	False	AATAAA	-29
PB.10828.17	chr7	+	2642	8	novel_in_catalog	CALU	novel	3210	6	NA	NA	-10	0	no_combination_of_known_junctions	FALSE	canonical	1	12548	junction_3	991819.8913490663	NA	3	1	TRUE	NA	NA	NA	C	coding	241	726	508	1233	90.0	-18	True	NA	NA
PB.10828.16	chr7	+	2693	7	full-splice_match	CALU	ENST00000249364.8	3357	7	11	653	-10	245	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	1	NA	TRUE	NA	NA	NA	C	coding	315	948	92	1039	20.0	-18	True	GATAAA	-21
PB.10828.15	chr7	+	5124	7	full-splice_match	CALU	ENST00000249364.8	3357	7	10	-1777	10	1444	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	5	NA	TRUE	NA	NA	NA	C	coding	315	948	93	1040	35.0	-19	True	ATTAAA	-14
PB.10828.14	chr7	+	2779	8	novel_in_catalog	CALU	novel	3210	6	NA	NA	10	1592	combination_of_known_junctions	FALSE	canonical	1	36804	junction_7	859748.7710536403	NA	3	NA	TRUE	NA	NA	NA	C	coding	315	948	93	1040	20.0	-19	True	NA	NA
PB.10828.13	chr7	+	3770	7	full-splice_match	CALU	ENST00000449187.6	2438	7	-11	-1321	10	90	multi-exon	FALSE	canonical	1	463511	junction_2	960546.3695455948	NA	17	1	TRUE	NA	NA	NA	C	coding	315	948	93	1040	55.0	-19	True	ATTAAA	-22
PB.10828.12	chr7	+	1848	7	full-splice_match	CALU	ENST00000249364.8	3357	7	9	1500	9	38	multi-exon	FALSE	canonical	1	1520398	junction_1	472072.86335609487	NA	10	2	TRUE	NA	NA	NA	C	coding	315	948	94	1041	10.0	-20	True	AATACA	-19
PB.10828.11	chr7	+	2450	7	full-splice_match	CALU	ENST00000449187.6	2438	7	-12	0	9	0	multi-exon	FALSE	canonical	1	463511	junction_2	960546.3695455948	NA	7	NA	TRUE	NA	NA	NA	C	coding	315	948	94	1041	90.0	-20	True	NA	NA
PB.10828.10	chr7	+	3145	6	full-splice_match	CALU	ENST00000535011.6	3210	6	59	6	9	-3	multi-exon	FALSE	canonical	1	12695	junction_5	812095.2292072648	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	94	768	25.0	-20	True	AATAAA	-12
PB.780.55	chr1	-	3032	10	incomplete-splice_match	ADAR	ENST00000368474.9	6610	15	-4	6531	-4	1274	3prime_fragment	FALSE	canonical	1	265041	junction_9	319102.90073335974	NA	0	NA	TRUE	NA	NA	NA	C	coding	949	2847	185	3031	55.0	-5	True	NA	NA
PB.780.54	chr1	-	5616	15	full-splice_match	ADAR	ENST00000368474.9	6610	15	66	928	-6	27	multi-exon	FALSE	canonical	1	265041	junction_14	298501.2048436355	NA	6	NA	TRUE	NA	NA	NA	C	coding	1226	3681	115	3795	55.0	-1	True	NA	NA
PB.780.57	chr1	-	2713	8	incomplete-splice_match	ADAR	ENST00000368471.8	6519	15	8	7736	8	59	3prime_fragment	FALSE	canonical	1	262111	junction_7	362013.4415868436	NA	1	NA	TRUE	NA	NA	NA	C	coding	579	1737	977	2713	50.0	7	True	NA	NA
PB.780.56	chr1	-	2791	8	incomplete-splice_match	ADAR	ENST00000368474.9	6610	15	11	7746	-5	59	3prime_fragment	FALSE	canonical	1	265041	junction_7	361089.94984934723	NA	0	NA	TRUE	NA	NA	NA	C	coding	874	2622	170	2791	50.0	10	True	NA	NA
PB.780.51	chr1	-	6163	16	novel_in_catalog	ADAR	novel	6610	15	NA	NA	-3	-63	combination_of_known_junctions	FALSE	canonical	1	95616	junction_14	446909.5273040992	NA	4	NA	TRUE	NA	NA	NA	C	coding	905	2718	933	3650	15.0	-4	True	NA	NA
PB.10828.19	chr7	+	1819	7	full-splice_match	CALU	ENST00000449187.6	2438	7	-10	629	-10	11	multi-exon	FALSE	canonical	1	463511	junction_2	960546.3695455948	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	92	1039	40.0	-18	True	ACTAAA	-3
PB.10828.18	chr7	+	2004	7	full-splice_match	CALU	ENST00000449187.6	2438	7	-10	444	-10	196	multi-exon	FALSE	canonical	1	463511	junction_2	960546.3695455948	NA	19	1	TRUE	NA	NA	NA	C	coding	315	948	92	1039	25.0	-18	True	ATTAAA	-20
PB.1451.6	chr10	+	2907	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-238	4588	-238	-4588	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	262	624	5.0	-4	True	AATGAA	-20
PB.1451.7	chr10	+	2602	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-234	4889	-234	-4889	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	258	620	50.0	0	True	NA	NA
PB.1451.4	chr10	+	7499	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-243	1	-243	-1	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	267	629	15.0	-9	True	AGTAAA	-15
PB.1451.5	chr10	+	3875	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-238	3620	-238	-3620	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	262	624	35.0	-4	True	NA	NA
PB.1451.2	chr10	+	2716	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-234	4775	-234	-4775	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	258	620	30.0	0	True	NA	NA
PB.1451.3	chr10	+	7170	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-250	337	-250	-337	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	274	636	60.0	-50	False	TTTAAA	-12
PB.7112.4	chr2	+	7129	13	incomplete-splice_match	FARP2	ENST00000627550.2	2122	18	-4	18632	-4	-3	3prime_fragment	FALSE	canonical	1	74353	junction_1	25126.277559006274	NA	1	NA	TRUE	NA	NA	NA	C	coding	795	2388	129	2516	20.0	0	True	AATAAA	-28
PB.1451.1	chr10	+	6261	3	full-splice_match	EIF4EBP2	ENST00000373218.4	7257	3	-273	1269	-273	-1269	multi-exon	FALSE	canonical	1	548195	junction_1	75401.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	297	659	25.0	-73	False	AATAAA	-13
PB.8435.31	chr3	+	2534	3	full-splice_match	ZBTB38	ENST00000510338.5	644	3	0	-1890	0	15	multi-exon	FALSE	canonical	1	92943	junction_1	54202.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2328	207	2534	65.0	-7	True	GATAAA	-40
PB.8435.30	chr3	+	4069	3	full-splice_match	ZBTB38	ENST00000510338.5	644	3	-4	-3421	-4	247	multi-exon	FALSE	canonical	1	92943	junction_1	54202.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1195	3588	211	3798	45.0	-11	True	AATAAA	-19
PB.8435.33	chr3	+	6612	4	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	5	514	intron_retention	FALSE	canonical	1	14260	junction_2	32642.36689062578	NA	0	NA	TRUE	NA	NA	NA	C	coding	1192	3579	309	3887	30.0	-2	True	ATTAAA	-16
PB.8435.32	chr3	+	3075	4	novel_in_catalog	ZBTB38	novel	1434	8	NA	NA	1	459	combination_of_known_junctions	FALSE	canonical	1	14260	junction_2	32642.36689062578	NA	0	NA	TRUE	NA	NA	NA	C	coding	921	2763	313	3075	55.0	-6	True	NA	NA
PB.4569.1	chr16	-	2434	2	full-splice_match	C16orf46	ENST00000444657.3	561	2	30	-1903	7	1173	multi-exon	FALSE	canonical	1	6816	junction_1	0.0	NA	5	NA	TRUE	NA	NA	NA	A	coding	122	369	712	1080	70.0	0	True	NA	NA
PB.8435.34	chr3	+	6840	4	full-splice_match	ZBTB38	ENST00000504673.5	590	4	-14	-6236	7	719	multi-exon	FALSE	canonical	1	6166	junction_2	36256.24555239491	NA	1	NA	TRUE	NA	NA	NA	C	coding	1192	3579	332	3910	20.0	0	True	AATAAA	-18
PB.1451.8	chr10	+	2654	4	novel_not_in_catalog	EIF4EBP2	novel	7257	3	NA	NA	-233	-4693	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	300343.47138604865	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	114	476	35.0	1	True	ATTAAA	-29
PB.7182.2	chr20	-	2921	19	incomplete-splice_match	KIF16B	ENST00000408042.5	4640	23	73	12323	73	584	3prime_fragment	FALSE	canonical	1	52538	junction_7	12555.499223693689	NA	0	NA	TRUE	NA	NA	NA	C	coding	945	2835	86	2920	70.0	-12	True	NA	NA
PB.8609.3	chr3	-	7219	24	novel_in_catalog	ACAP2	novel	7160	23	NA	NA	3	-8	intron_retention	FALSE	canonical	1	14781	junction_7	104169.04016129149	NA	2	NA	TRUE	NA	NA	NA	C	coding	813	2442	194	2635	20.0	-27	True	AATAAA	-20
PB.6864.13	chr2	+	3386	20	novel_not_in_catalog	AGPS	novel	7764	20	NA	NA	277	1366	any annotated donor/acceptor	FALSE	canonical	1	5500	junction_1	106747.4328968193	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	91	1797	60.0	-2554	False	AATAAA	-33
PB.6574.2	chr2	-	2898	14	full-splice_match	LOXL3	ENST00000264094.7	3502	14	-88	692	-62	0	multi-exon	FALSE	canonical	1	45225	junction_13	59950.00180998956	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	161	2422	25.0	1678	False	TATAAA	-18
PB.3255.2	chr13	+	3665	1	novel_in_catalog	AL162497.1	novel	518	3	NA	NA	1253	-17504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	coding	155	468	3106	3573	45.0	0	True	ATTAAA	-23
PB.3255.3	chr13	+	3475	1	novel_in_catalog	AL162497.1	novel	518	3	NA	NA	1255	-17692	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	55.0	2	True	AATAAA	-17
PB.3255.1	chr13	+	3931	1	novel_in_catalog	AL162497.1	novel	518	3	NA	NA	1237	-17254	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	coding	155	468	3122	3589	5.0	-16	True	AATATA	-29
PB.6756.8	chr2	+	3866	23	full-splice_match	R3HDM1	ENST00000409478.5	4272	23	-26	432	2	-431	multi-exon	FALSE	canonical	1	138829	junction_1	90850.89446032843	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	415	3324	50.0	-23	True	AATAGA	-44
PB.11793.1	chr9	+	2612	6	full-splice_match	MVB12B	ENST00000489637.3	2666	6	-47	101	-34	-101	multi-exon	FALSE	canonical	1	36102	junction_1	31649.470715321604	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	116	781	50.0	-29	True	AATAAA	-19
PB.6457.1	chr2	+	3123	16	full-splice_match	MSH2	ENST00000233146.6	3307	16	182	2	21	-1	multi-exon	FALSE	canonical	1	290890	junction_1	95971.66234189479	NA	0	NA	TRUE	NA	NA	NA	C	coding	934	2805	42	2846	20.0	-16	True	AATAAA	-22
PB.6457.3	chr2	+	2775	16	full-splice_match	MSH2	ENST00000233146.6	3307	16	198	334	37	-333	multi-exon	FALSE	canonical	1	290890	junction_1	95971.66234189479	NA	0	NA	TRUE	NA	NA	NA	C	coding	916	2748	26	2773	50.0	0	True	AATAAA	-31
PB.6457.2	chr2	+	3058	15	novel_in_catalog	MSH2	novel	3307	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	20802	junction_4	152048.71589195635	NA	0	NA	TRUE	NA	NA	NA	C	coding	884	2655	126	2780	20.0	0	True	AATAAA	-23
PB.6457.4	chr2	+	1763	11	incomplete-splice_match	MSH2	ENST00000233146.6	3307	16	152	12233	2	-12232	3prime_fragment	FALSE	canonical	1	290890	junction_1	59463.14224971634	NA	0	NA	TRUE	NA	NA	NA	C	coding	564	1692	72	1763	70.0	-46	True	AATGAA	-10
PB.656.8	chr1	-	2005	5	novel_in_catalog	SEC22B	novel	6922	5	NA	NA	-5	-739	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	197	754	20.0	-1	True	ATTAAA	-16
PB.7599.9	chr22	+	3400	6	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-18	309	intron_retention	FALSE	non_canonical	0	0	junction_5	95130.05683799417	NA	3	1	TRUE	NA	NA	NA	C	coding	305	918	388	1305	75.0	-8	True	NA	NA
PB.7599.8	chr22	+	2635	5	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_4	84343.52565364754	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	390	1160	40.0	-10	True	ATTAAA	-21
PB.6654.14	chr2	-	2476	6	incomplete-splice_match	REV1	ENST00000393445.7	4686	23	-25	37055	-25	1044	3prime_fragment	FALSE	canonical	1	90452	junction_5	50614.931004991005	NA	1	NA	TRUE	NA	NA	NA	C	coding	413	1242	193	1434	40.0	1	True	NA	NA
PB.7599.1	chr22	+	2913	7	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95736.10699034439	NA	8	1	TRUE	NA	NA	NA	C	coding	305	918	210	1127	40.0	0	True	ATTAAA	-21
PB.7599.3	chr22	+	2766	6	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	0	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	77366.98254423524	NA	1	NA	TRUE	NA	NA	NA	C	coding	256	771	207	977	45.0	3	True	ATTAAA	-23
PB.7599.2	chr22	+	2608	7	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	0	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95736.10699034439	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	210	1127	40.0	0	True	ATTAAA	-27
PB.7599.5	chr22	+	2446	6	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	0	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	77366.98254423524	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	207	977	50.0	3	True	ATTAAA	-15
PB.7599.4	chr22	+	2529	7	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	0	-370	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95736.10699034439	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	207	1124	20.0	3	True	NA	NA
PB.7599.7	chr22	+	2693	6	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-21	2	intron_retention	FALSE	non_canonical	0	0	junction_5	95130.05683799417	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	391	1308	45.0	-11	True	ATTAAA	-23
PB.7599.6	chr22	+	2784	6	novel_not_in_catalog	PEX26	novel	3924	5	NA	NA	-21	1	intron_retention	FALSE	non_canonical	0	0	junction_5	95130.05683799417	NA	1	NA	TRUE	NA	NA	NA	C	coding	305	918	391	1308	40.0	-11	True	ATTAAA	-22
PB.4781.2	chr17	-	2011	5	novel_not_in_catalog	PMP22	novel	1822	5	NA	NA	-20	-3	any annotated donor/acceptor	FALSE	canonical	1	2065	junction_4	306132.5106055995	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	393	875	10.0	-13	True	AATAAA	-14
PB.9489.1	chr5	+	2147	1	genic	UBE2D2	novel	NA	NA	NA	NA	-242	-86350	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-2750	False	NA	NA
PB.9489.2	chr5	+	3081	2	novel_not_in_catalog	UBE2D2	novel	656	7	NA	NA	-192	-83157	any annotated donor/acceptor	FALSE	canonical	1	551	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	177	534	533	1066	10.0	-1	True	NA	NA
PB.10096.4	chr6	-	2123	21	novel_not_in_catalog	RARS2	novel	1818	20	NA	NA	14	438	any annotated donor/acceptor	FALSE	canonical	1	13673	junction_1	143681.3011489665	NA	1	NA	TRUE	NA	NA	NA	C	coding	588	1767	33	1799	25.0	-13	True	AATAAA	-12
PB.5083.1	chr17	-	2018	1	full-splice_match	AC103702.1	ENST00000548801.1	2630	1	-99	711	-99	-711	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	85.0	7915	False	ACTAAA	-43
PB.10096.5	chr6	-	1965	19	novel_not_in_catalog	RARS2	novel	1818	20	NA	NA	16	-2	any annotated donor/acceptor	FALSE	canonical	1	29825	junction_14	145289.85518016972	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	721	1932	25.0	-11	True	ATTAAA	-23
PB.5452.15	chr18	+	2378	21	novel_in_catalog	ELP2	novel	535	7	NA	NA	1	1	no_combination_of_known_junctions	TRUE	canonical	1	2914	junction_11	168242.41341958783	NA	2	NA	TRUE	NA	NA	NA	C	coding	776	2331	35	2365	20.0	-3	True	AATAAA	-26
PB.5452.14	chr18	+	2723	17	novel_in_catalog	ELP2	novel	535	7	NA	NA	1	50	intron_retention	FALSE	canonical	1	336511	junction_5	85075.85592171553	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	35	1675	75.0	-3	True	CATAAA	-3
PB.5452.17	chr18	+	2393	21	novel_in_catalog	ELP2	novel	535	7	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	27596	junction_19	153793.05414614797	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2139	34	2172	20.0	-2	True	AATAAA	-26
PB.5452.16	chr18	+	2653	23	novel_not_in_catalog	ELP2	novel	535	7	NA	NA	0	2	any annotated donor/acceptor	FALSE	canonical	1	1007	junction_20	192001.6490239318	NA	0	NA	TRUE	NA	NA	NA	C	coding	845	2538	34	2571	15.0	-2	True	NA	NA
PB.5452.11	chr18	+	2721	23	full-splice_match	ELP2	ENST00000442325.6	2722	23	4	-3	0	1	multi-exon	FALSE	canonical	1	32560	junction_6	183451.25950363785	NA	0	NA	TRUE	NA	NA	NA	C	coding	891	2676	33	2708	20.0	-1	True	AATAAA	-26
PB.5452.10	chr18	+	3742	22	full-splice_match	ELP2	ENST00000358232.10	8459	22	28	4689	0	835	multi-exon	FALSE	canonical	1	336511	junction_5	122453.4330596543	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	36	2516	20.0	-4	True	AATAAA	-15
PB.5452.13	chr18	+	3196	22	full-splice_match	ELP2	ENST00000358232.10	8459	22	29	5234	1	290	multi-exon	FALSE	canonical	1	336511	junction_5	122453.4330596543	NA	1	NA	TRUE	NA	NA	NA	C	coding	826	2481	35	2515	30.0	-3	True	AATAAA	-22
PB.5452.12	chr18	+	2594	22	full-splice_match	ELP2	ENST00000358232.10	8459	22	31	5834	0	1	multi-exon	FALSE	canonical	1	336511	junction_5	122453.4330596543	NA	0	NA	TRUE	NA	NA	NA	C	coding	826	2481	33	2513	15.0	-1	True	NA	NA
PB.6678.6	chr2	+	2956	8	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	638	33844	8	160	3prime_fragment	FALSE	canonical	1	157152	junction_1	35273.94545437705	NA	0	NA	TRUE	NA	NA	NA	C	coding	960	2880	77	2956	65.0	-23	True	AAAAAG	-6
PB.6678.7	chr2	+	6891	23	full-splice_match	GCC2	ENST00000309863.10	7537	23	645	1	15	0	multi-exon	FALSE	canonical	1	157152	junction_1	31535.766329022	NA	4	NA	TRUE	NA	NA	NA	C	coding	1684	5055	70	5124	15.0	-16	True	ATTAAA	-14
PB.6678.4	chr2	+	3643	13	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	633	25138	3	-479	3prime_fragment	FALSE	canonical	1	157152	junction_1	34817.68397149484	NA	0	NA	TRUE	NA	NA	NA	C	coding	1187	3561	82	3642	75.0	-28	True	AATAAA	-26
PB.9337.38	chr5	-	3578	11	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	1	3489	junction_9	193151.9567482815	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	504	1805	35.0	-4	True	AATAAA	-29
PB.5452.19	chr18	+	2385	21	novel_not_in_catalog	ELP2	novel	535	7	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_16	190884.28739277492	NA	23	4	TRUE	NA	NA	NA	C	coding	559	1680	22	1701	25.0	10	True	NA	NA
PB.5452.18	chr18	+	3672	23	novel_not_in_catalog	ELP2	novel	535	7	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	162942.15505915685	NA	2	1	TRUE	NA	NA	NA	C	coding	826	2481	33	2513	30.0	-1	True	AATAAA	-21
PB.6678.1	chr2	+	2737	6	incomplete-splice_match	GCC2	ENST00000309863.10	7537	23	666	37380	4	-881	3prime_fragment	FALSE	canonical	1	157152	junction_1	32245.782171316605	NA	0	NA	TRUE	NA	NA	NA	C	coding	896	2688	49	2736	60.0	5	True	NA	NA
PB.10048.1	chr6	-	2747	5	novel_in_catalog	LINC00680-GUSBP4	novel	675	7	NA	NA	-50	-25927	intron_retention	FALSE	canonical	1	44542	junction_2	17403.664887028823	NA	1	NA	TRUE	NA	NA	NA	B	coding	100	303	3	305	40.0	-38	False	NA	NA
PB.6199.8	chr19	+	4188	7	novel_not_in_catalog	TPM3P9	novel	2920	2	NA	NA	-1	13581	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	76906.6363039194	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	607	2685	20.0	-1	True	NA	NA
PB.4575.1	chr16	-	1089	5	full-splice_match	MPHOSPH6	ENST00000258169.8	1103	5	12	2	-1	-2	multi-exon	FALSE	canonical	1	200091	junction_4	198030.56741195286	NA	0	NA	TRUE	NA	NA	NA	A	coding	160	483	40	522	15.0	-18	True	AATAAA	-15
PB.6199.6	chr19	+	3345	5	novel_not_in_catalog	TPM3P9	novel	2920	2	NA	NA	-8	0	any annotated donor/acceptor	TRUE	canonical	1	662	junction_1	15411.351319725341	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-8	True	NA	NA
PB.6199.7	chr19	+	3871	4	novel_in_catalog	TPM3P9	novel	2920	2	NA	NA	-2	13588	no_combination_of_known_junctions	FALSE	canonical	1	49	junction_3	61315.899413519895	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	121	2361	20.0	-2	True	NA	NA
PB.6199.4	chr19	+	3037	3	novel_not_in_catalog	TPM3P9	novel	2920	2	NA	NA	-10	1	any annotated donor/acceptor	FALSE	canonical	1	16333	junction_1	12302.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-10	True	NA	NA
PB.6199.5	chr19	+	2931	2	full-splice_match	TPM3P9	ENST00000424846.3	2920	2	-10	-1	-10	1	multi-exon	FALSE	canonical	1	25534	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-10	True	NA	NA
PB.6199.2	chr19	+	3993	5	novel_in_catalog	TPM3P9	novel	2920	2	NA	NA	-17	13584	no_combination_of_known_junctions	FALSE	canonical	1	49	junction_4	75328.5753495146	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	247	2487	15.0	-17	False	NA	NA
PB.6199.3	chr19	+	4324	7	novel_not_in_catalog	TPM3P9	novel	2920	2	NA	NA	-15	13589	any annotated donor/acceptor	FALSE	canonical	1	41	junction_3	74463.8094776024	NA	0	NA	TRUE	NA	NA	NA	C	coding	746	2241	573	2813	20.0	-15	True	NA	NA
PB.6199.1	chr19	+	4111	6	novel_not_in_catalog	TPM3P9	novel	2920	2	NA	NA	-47	13581	any annotated donor/acceptor	FALSE	canonical	1	49	junction_4	75645.55118551255	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	530	2608	20.0	-47	False	NA	NA
PB.10048.2	chr6	-	2216	6	novel_not_in_catalog	LINC00680-GUSBP4	novel	675	7	NA	NA	-42	-26161	any annotated donor/acceptor	TRUE	canonical	1	3694	junction_2	29613.629614756785	NA	1	NA	TRUE	NA	NA	NA	B	coding	98	297	1	297	5.0	-30	False	AATAAA	-25
PB.417.5	chr1	-	2406	6	novel_in_catalog	C1orf123	novel	1085	8	NA	NA	-4	1	intron_retention	FALSE	canonical	1	457287	junction_5	152161.01956151583	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	AATAAA	-19
PB.9357.30	chr5	+	4741	18	full-splice_match	LNPEP	ENST00000231368.9	12752	18	616	7395	616	1084	multi-exon	FALSE	canonical	1	122352	junction_7	34977.82487940206	NA	0	NA	TRUE	NA	NA	NA	C	coding	1025	3078	77	3154	50.0	0	True	AATAAA	-16
PB.8957.2	chr4	+	2060	9	novel_in_catalog	AC093752.1	novel	605	3	NA	NA	-16	317	combination_of_known_junctions	TRUE	canonical	1	67038	junction_4	30995.744885387092	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	50.0	-4686	False	ATTAAA	-28
PB.7003.1	chr2	+	2427	1	novel_in_catalog	PNKD	novel	758	3	NA	NA	-1	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	130	393	18	410	20.0	-6	True	AATAAA	-25
PB.9357.33	chr5	+	3349	16	novel_in_catalog	LNPEP	novel	2075	2	NA	NA	620	-1	no_combination_of_known_junctions	FALSE	canonical	1	3710	junction_14	56327.843510963176	NA	0	NA	TRUE	NA	NA	NA	C	coding	924	2775	73	2847	25.0	4	True	AATAAA	-20
PB.6743.9	chr2	+	3768	7	novel_in_catalog	PLEKHB2	novel	2277	8	NA	NA	-2	-7	no_combination_of_known_junctions	FALSE	canonical	1	12912	junction_1	285816.90190108307	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	173	697	15.0	-2	True	ATTAAA	-17
PB.6743.8	chr2	+	3813	8	novel_in_catalog	PLEKHB2	novel	2277	8	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	481816	junction_6	179111.77086617262	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	74	742	15.0	-2	True	ATTAAA	-17
PB.12170.4	chrX	+	3945	8	novel_in_catalog	ZNF711	novel	4124	9	NA	NA	3	-4	no_combination_of_known_junctions	FALSE	canonical	1	1874	junction_1	54275.316173324	NA	6	NA	TRUE	NA	NA	NA	C	coding	761	2286	132	2417	30.0	0	True	AATAAA	-14
PB.12170.3	chrX	+	4083	9	novel_in_catalog	ZNF711	novel	4124	9	NA	NA	3	-4	no_combination_of_known_junctions	FALSE	canonical	1	1874	junction_1	59571.33742203544	NA	2	NA	TRUE	NA	NA	NA	C	coding	807	2424	132	2555	30.0	0	True	AATAAA	-14
PB.1691.1	chr10	+	1881	9	full-splice_match	HTRA1	ENST00000368984.7	2120	9	234	5	234	-4	multi-exon	FALSE	canonical	1	530901	junction_1	287448.6361264174	NA	0	NA	TRUE	NA	NA	NA	A	coding	167	504	834	1337	15.0	-7714	False	ATTAAA	-14
PB.12170.1	chrX	+	4417	10	full-splice_match	ZNF711	ENST00000276123.7	2887	10	-91	-1439	-39	0	multi-exon	FALSE	canonical	1	28951	junction_1	53599.00201692077	NA	0	NA	TRUE	NA	NA	NA	C	coding	761	2286	600	2885	30.0	2	True	AATAAA	-18
PB.12059.1	chrX	+	1850	13	full-splice_match	FTSJ1	ENST00000348411.2	1892	13	35	7	-7	-1	multi-exon	FALSE	canonical	1	330344	junction_1	118532.9970745371	NA	1	1	TRUE	NA	NA	NA	C	coding	329	990	289	1278	25.0	-7	True	NA	NA
PB.9357.35	chr5	+	4776	10	incomplete-splice_match	LNPEP	ENST00000395770.3	3888	18	44962	-2846	7035	2846	5prime_fragment	FALSE	canonical	1	172894	junction_2	23639.574116194686	NA	3	NA	TRUE	NA	NA	NA	C	coding	468	1407	21	1427	90.0	NA	False	NA	NA
PB.12059.3	chrX	+	1948	14	full-splice_match	FTSJ1	ENST00000019019.6	1986	14	42	-4	0	-2	multi-exon	FALSE	canonical	1	10333	junction_1	223641.91132545297	NA	2	1	TRUE	NA	NA	NA	C	coding	327	984	388	1371	35.0	0	True	NA	NA
PB.12059.2	chrX	+	2045	12	novel_in_catalog	FTSJ1	novel	1669	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	330344	junction_1	115973.23246827474	NA	1	1	TRUE	NA	NA	NA	C	coding	337	1014	293	1306	25.0	-11	True	NA	NA
PB.6743.5	chr2	+	2863	8	novel_in_catalog	PLEKHB2	novel	2277	8	NA	NA	-2	-964	combination_of_known_junctions	FALSE	canonical	1	481816	junction_6	179111.77086617262	NA	0	NA	TRUE	NA	NA	NA	C	coding	222	669	81	749	25.0	-5009	False	ATTAAA	-31
PB.12059.4	chrX	+	1821	13	novel_in_catalog	FTSJ1	novel	1669	9	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	229819	junction_9	143976.98411462526	NA	1	1	TRUE	NA	NA	NA	C	coding	327	984	261	1244	35.0	21	True	NA	NA
PB.6743.7	chr2	+	1809	9	full-splice_match	PLEKHB2	ENST00000403716.5	4349	9	486	2054	-3	0	multi-exon	FALSE	canonical	1	46246	junction_8	322301.67321044113	NA	0	NA	TRUE	NA	NA	NA	C	coding	236	711	75	785	80.0	-3	True	NA	NA
PB.6743.6	chr2	+	3838	8	full-splice_match	PLEKHB2	ENST00000409158.5	2277	8	486	-2047	-3	-7	multi-exon	FALSE	canonical	1	90657	junction_6	269185.7068959294	NA	1	NA	TRUE	NA	NA	NA	C	coding	230	693	75	767	15.0	-3	True	ATTAAA	-17
PB.4204.1	chr16	-	3109	7	full-splice_match	ZSCAN32	ENST00000396846.7	3173	7	68	-4	-2	4	multi-exon	FALSE	canonical	1	33806	junction_4	22937.705891295136	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	244	2334	10.0	0	True	AATAAA	-25
PB.4204.3	chr16	-	3491	3	novel_in_catalog	ZSCAN32	novel	3173	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	17483	junction_1	34071.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	185	558	272	829	0.0	-28	False	AATAAA	-17
PB.4204.2	chr16	-	3177	8	novel_not_in_catalog	ZSCAN32	novel	3173	7	NA	NA	2	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_6	30185.304347158934	NA	0	NA	TRUE	NA	NA	NA	C	coding	696	2091	319	2409	5.0	23	True	AATAAA	-18
PB.4204.5	chr16	-	2985	6	novel_in_catalog	ZSCAN32	novel	3173	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	8902	junction_4	36253.56178143052	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1416	803	2218	0.0	0	True	AATAAA	-17
PB.4204.4	chr16	-	3165	7	novel_in_catalog	ZSCAN32	novel	3173	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	8992	junction_3	28931.0122801736	NA	1	NA	TRUE	NA	NA	NA	C	coding	485	1458	941	2398	0.0	-14	True	AATAAA	-17
PB.4204.7	chr16	-	2164	3	full-splice_match	ZSCAN32	ENST00000439568.2	1746	3	-4	-414	-3	0	multi-exon	FALSE	canonical	1	2262	junction_2	45808.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	171	1397	0.0	-1	True	AATAAA	-17
PB.4204.6	chr16	-	2875	5	novel_in_catalog	ZSCAN32	novel	3173	7	NA	NA	-6	0	no_combination_of_known_junctions	FALSE	canonical	1	1440	junction_3	36327.90344470074	NA	13	NA	TRUE	NA	NA	NA	C	coding	485	1458	651	2108	0.0	15	True	AATAAA	-17
PB.4795.2	chr17	-	2986	5	novel_not_in_catalog	TNFRSF13B	novel	1266	10	NA	NA	6	4	any annotated donor/acceptor	FALSE	canonical	1	3573	junction_2	153636.90704628883	NA	1	NA	TRUE	NA	NA	NA	C	coding	165	498	37	534	10.0	-27	True	AATAAA	-28
PB.4795.3	chr17	-	1255	4	full-splice_match	TNFRSF13B	ENST00000583789.1	859	4	-37	-359	-6	0	multi-exon	FALSE	canonical	1	130566	junction_3	119488.66884725467	NA	0	NA	TRUE	NA	NA	NA	C	coding	247	744	50	793	10.0	-40	True	AATAAA	-24
PB.4795.1	chr17	-	1359	5	full-splice_match	TNFRSF13B	ENST00000261652.6	1357	5	3	-5	2	5	multi-exon	FALSE	canonical	1	158309	junction_4	93902.22466347643	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	11	892	10.0	-1	True	AATAAA	-29
PB.4795.6	chr17	-	2620	3	incomplete-splice_match	TNFRSF13B	ENST00000581616.2	1420	4	-40	6100	0	-6100	3prime_fragment	FALSE	canonical	1	158309	junction_2	56810.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	44	550	85.0	-34	True	NA	NA
PB.4795.7	chr17	-	2459	2	incomplete-splice_match	TNFRSF13B	ENST00000583789.1	859	4	-8	7162	-7	-6100	3prime_fragment	FALSE	canonical	1	130566	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	21	389	85.0	-11	True	NA	NA
PB.4795.4	chr17	-	1263	6	novel_not_in_catalog	TNFRSF13B	novel	1266	10	NA	NA	10	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	141643.6337991934	NA	2	1	TRUE	NA	NA	NA	C	coding	293	882	33	914	10.0	-23	True	AATAAA	-24
PB.4795.5	chr17	-	1140	5	full-splice_match	TNFRSF13B	ENST00000261652.6	1357	5	-23	240	6	119	multi-exon	FALSE	canonical	1	158309	junction_4	93902.22466347643	NA	2	NA	TRUE	NA	NA	NA	C	coding	293	882	37	918	45.0	-27	True	NA	NA
PB.11613.2	chr9	-	3056	6	novel_not_in_catalog	GNAQ	novel	6539	7	NA	NA	207603	-3050	any annotated donor/acceptor	TRUE	canonical	1	3418	junction_5	69434.16044397744	NA	1	NA	TRUE	NA	NA	NA	C	coding	157	474	397	870	90.0	NA	False	NA	NA
PB.3159.20	chr13	+	2350	3	full-splice_match	RB1	ENST00000484879.1	1097	3	-12	-1241	-12	-2	multi-exon	FALSE	canonical	1	545895	junction_2	9630.5	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-19
PB.6419.6	chr2	-	2723	18	novel_in_catalog	PRKD3	novel	6111	19	NA	NA	25	-2437	combination_of_known_junctions	FALSE	canonical	1	19638	junction_17	77327.76869407363	NA	0	NA	TRUE	NA	NA	NA	B	coding	786	2361	128	2488	25.0	-12	True	TATAAA	-17
PB.4548.2	chr16	-	3740	27	full-splice_match	GLG1	ENST00000205061.9	8261	27	-2	4523	-2	9	multi-exon	FALSE	canonical	1	171963	junction_1	197645.8299794104	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	50	3634	5.0	-3	True	ATTAAA	-22
PB.4548.3	chr16	-	3708	26	full-splice_match	GLG1	ENST00000447066.6	3626	26	-5	-77	-3	9	multi-exon	FALSE	canonical	1	7642	junction_25	237738.1289267668	NA	0	NA	TRUE	NA	NA	NA	C	coding	1183	3552	51	3602	5.0	-4	True	ATTAAA	-22
PB.11716.29	chr9	-	2288	20	incomplete-splice_match	ECPAS	ENST00000338205.9	7078	49	130	51338	130	-3459	3prime_fragment	FALSE	canonical	1	95912	junction_19	99298.85826440784	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2196	91	2286	50.0	2	True	TATAAA	-4
PB.4548.1	chr16	-	4776	26	full-splice_match	GLG1	ENST00000422840.6	4748	26	-19	-9	-1	9	multi-exon	FALSE	canonical	1	452468	junction_25	159784.41120672066	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	47	3559	5.0	0	True	ATTAAA	-22
PB.4548.6	chr16	-	3768	26	full-splice_match	GLG1	ENST00000422840.6	4748	26	120	860	120	-29	multi-exon	FALSE	canonical	1	452468	junction_25	159784.41120672066	NA	0	NA	TRUE	NA	NA	NA	C	coding	980	2943	478	3420	65.0	139	False	AAGAAA	-7
PB.4548.7	chr16	-	3794	25	novel_in_catalog	GLG1	novel	8261	27	NA	NA	-4	-29	intron_retention	FALSE	canonical	1	5153	junction_9	220277.7262385637	NA	2	NA	TRUE	NA	NA	NA	C	coding	799	2400	52	2451	65.0	-5	True	AAGAAA	-7
PB.4548.4	chr16	-	4668	27	novel_not_in_catalog	GLG1	novel	8261	27	NA	NA	1	2	intron_retention	FALSE	canonical	1	11542	junction_1	217828.1529580019	NA	0	NA	TRUE	NA	NA	NA	C	coding	1170	3513	45	3557	0.0	2	True	ATTAAA	-15
PB.4548.5	chr16	-	4778	25	novel_not_in_catalog	GLG1	novel	8261	27	NA	NA	0	1	intron_retention	FALSE	canonical	1	87	junction_9	261332.16765671945	NA	3	NA	TRUE	NA	NA	NA	C	coding	1173	3522	48	3569	0.0	-1	True	ATTAAA	-14
PB.11716.23	chr9	-	5631	49	full-splice_match	ECPAS	ENST00000338205.9	7078	49	121	1326	121	-132	multi-exon	FALSE	canonical	1	95912	junction_48	219824.89260333488	NA	0	NA	TRUE	NA	NA	NA	C	coding	1839	5520	100	5619	50.0	185	False	AATAAA	-12
PB.11716.27	chr9	-	2561	21	incomplete-splice_match	ECPAS	ENST00000338205.9	7078	49	-64	50388	-64	-2509	3prime_fragment	FALSE	canonical	1	95912	junction_20	119373.69004374456	NA	2	NA	TRUE	NA	NA	NA	C	coding	759	2277	285	2561	60.0	0	True	NA	NA
PB.11716.26	chr9	-	4619	41	novel_in_catalog	ECPAS	novel	7078	49	NA	NA	12	-6926	combination_of_known_junctions	FALSE	canonical	1	50746	junction_40	171755.77329292125	NA	0	NA	TRUE	NA	NA	NA	C	coding	1498	4494	125	4618	60.0	-4	True	NA	NA
PB.11716.25	chr9	-	5611	48	incomplete-splice_match	ECPAS	ENST00000338205.9	7078	49	-25	2910	-25	-1716	3prime_fragment	FALSE	canonical	1	95912	junction_47	221005.52152121183	NA	0	NA	TRUE	NA	NA	NA	C	coding	1788	5364	246	5609	50.0	0	True	NA	NA
PB.11716.24	chr9	-	5896	50	novel_in_catalog	ECPAS	novel	7078	49	NA	NA	-57	-149	intron_retention	FALSE	canonical	1	26493	junction_49	233582.75349265302	NA	0	NA	TRUE	NA	NA	NA	C	coding	1838	5514	382	5895	55.0	7	True	AAGAAA	-17
PB.11613.3	chr9	-	2275	1	incomplete-splice_match	GNAQ	ENST00000286548.8	6539	7	310047	3050	309193	-3050	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	4166	False	NA	NA
PB.8361.4	chr3	-	2679	7	novel_not_in_catalog	SLC12A8	novel	2831	8	NA	NA	112	-1	any annotated donor/acceptor	TRUE	canonical	1	1104	junction_6	41425.41482693122	NA	1	NA	TRUE	NA	NA	NA	C	coding	407	1224	205	1428	25.0	-1	True	ATTAAA	-19
PB.880.3	chr1	+	3273	6	novel_not_in_catalog	AL590385.2	novel	553	5	NA	NA	68188	-7192	intron_retention	FALSE	non_canonical	0	0	junction_1	13627.808422486722	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.11241.13	chr8	-	3614	13	full-splice_match	VIRMA	ENST00000421249.2	3924	13	64	246	58	-246	multi-exon	FALSE	canonical	1	184214	junction_10	40838.77293972264	NA	0	NA	TRUE	NA	NA	NA	C	coding	1147	3444	19	3462	15.0	1	True	AATAAA	-15
PB.8195.12	chr3	+	5402	23	novel_in_catalog	SLMAP	novel	556	2	NA	NA	80	-1	combination_of_known_junctions	FALSE	canonical	1	49539	junction_12	110620.78644822388	NA	3	2	TRUE	NA	NA	NA	C	coding	828	2487	1138	3624	25.0	1	True	AATAAA	-17
PB.7987.4	chr3	-	2433	9	novel_in_catalog	AZI2	novel	439	4	NA	NA	33	815	combination_of_known_junctions	FALSE	canonical	1	5492	junction_8	201873.7384270178	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	585	1763	90.0	1	True	NA	NA
PB.7987.5	chr3	-	2179	7	novel_in_catalog	AZI2	novel	439	4	NA	NA	25	815	no_combination_of_known_junctions	FALSE	canonical	1	5294	junction_4	179789.24025129783	NA	3	NA	TRUE	NA	NA	NA	C	coding	245	738	772	1509	90.0	-30	True	NA	NA
PB.7987.6	chr3	-	1738	8	full-splice_match	AZI2	ENST00000479665.5	4706	8	475	2493	-23	647	multi-exon	FALSE	canonical	1	309554	junction_4	81837.83767292237	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	58	1236	20.0	1	True	AATAAA	-19
PB.7987.7	chr3	-	1883	8	full-splice_match	AZI2	ENST00000479665.5	4706	8	196	2627	-7	513	multi-exon	FALSE	canonical	1	309554	junction_4	81837.83767292237	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	337	1515	70.0	64	True	NA	NA
PB.7987.1	chr3	-	3084	8	full-splice_match	AZI2	ENST00000479665.5	4706	8	313	1309	5	-3	multi-exon	FALSE	canonical	1	309554	junction_4	81837.83767292237	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	220	1398	35.0	1	True	AATAAA	-19
PB.7987.2	chr3	-	2504	8	full-splice_match	AZI2	ENST00000479665.5	4706	8	290	1912	-18	-606	multi-exon	FALSE	canonical	1	309554	junction_4	81837.83767292237	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	243	1421	20.0	-22	True	AATAAA	-33
PB.7987.3	chr3	-	1920	8	full-splice_match	AZI2	ENST00000479665.5	4706	8	461	2325	-37	815	multi-exon	FALSE	canonical	1	309554	junction_4	81837.83767292237	NA	0	NA	TRUE	NA	NA	NA	C	coding	392	1179	72	1250	90.0	0	True	NA	NA
PB.1099.7	chr1	+	2982	8	full-splice_match	SYT14	ENST00000472886.5	2966	8	-18	2	-18	-2	multi-exon	FALSE	canonical	1	2311	junction_2	7254.810496969496	NA	0	NA	TRUE	NA	NA	NA	C	coding	555	1668	33	1700	35.0	0	True	TATAAA	-15
PB.7987.8	chr3	-	1501	8	full-splice_match	AZI2	ENST00000479665.5	4706	8	78	3127	1	13	multi-exon	FALSE	canonical	1	309554	junction_4	81837.83767292237	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1047	455	1501	25.0	46	False	NA	NA
PB.7987.9	chr3	-	2419	7	full-splice_match	AZI2	ENST00000463512.5	1485	7	-82	-852	-4	852	multi-exon	FALSE	canonical	1	309554	junction_3	86744.87758123435	NA	1	NA	TRUE	NA	NA	NA	C	coding	264	795	460	1254	15.0	41	False	AATAAA	-26
PB.415.1	chr1	+	2195	12	full-splice_match	SCP2	ENST00000640998.1	1101	12	-141	-953	-21	-2	multi-exon	FALSE	canonical	1	27111	junction_11	102760.66431042893	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	142	1242	30.0	-30	True	AATAAA	-23
PB.6900.2	chr2	+	3118	13	full-splice_match	PMS1	ENST00000441310.6	3225	13	117	-10	-3	10	multi-exon	FALSE	canonical	1	115835	junction_1	48270.7386075894	NA	1	1	TRUE	NA	NA	NA	C	coding	932	2799	117	2915	50.0	-14	True	AATAAA	-28
PB.7616.4	chr22	-	2044	11	novel_not_in_catalog	TXNRD2	novel	2025	18	NA	NA	4	19	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	131103.22574830108	NA	3	1	TRUE	NA	NA	NA	B	coding	218	657	23	679	15.0	1	True	NA	NA
PB.6900.3	chr2	+	3088	13	novel_in_catalog	PMS1	novel	2506	10	NA	NA	-2	10	no_combination_of_known_junctions	FALSE	canonical	1	6213	junction_1	66790.86738823072	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	87	2885	50.0	-13	True	AATAAA	-28
PB.7616.1	chr22	-	3171	16	novel_not_in_catalog	TXNRD2	novel	2025	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_8	120257.82950965532	NA	3	1	TRUE	NA	NA	NA	B	coding	276	831	754	1584	10.0	-1	True	AATAAA	-17
PB.4236.4	chr16	-	2927	27	incomplete-splice_match	USP7	ENST00000381886.8	3587	31	16343	9	15372	-9	5prime_fragment	FALSE	canonical	1	266938	junction_11	334973.86515222007	NA	0	NA	TRUE	NA	NA	NA	A	coding	878	2637	90	2726	35.0	-3419	False	AATGAA	-11
PB.7616.2	chr22	-	1944	17	novel_not_in_catalog	TXNRD2	novel	2025	18	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_9	117011.45382550964	NA	2	1	TRUE	NA	NA	NA	B	coding	276	831	759	1589	10.0	-6	True	AATAAA	-17
PB.1530.4	chr10	+	2653	20	incomplete-splice_match	KIF20B	ENST00000260753.8	6306	33	-7	37404	-7	26445	3prime_fragment	FALSE	canonical	1	89789	junction_17	38458.206196472755	NA	0	NA	TRUE	NA	NA	NA	B	coding	858	2574	80	2653	75.0	-7	True	AATGAA	-40
PB.1530.5	chr10	+	3718	20	incomplete-splice_match	KIF20B	ENST00000260753.8	6306	33	-3	36335	-3	27514	3prime_fragment	FALSE	canonical	1	89789	junction_17	38458.206196472755	NA	0	NA	TRUE	NA	NA	NA	B	coding	1214	3642	76	3717	60.0	-3	True	NA	NA
PB.1530.6	chr10	+	1821	14	incomplete-splice_match	KIF20B	ENST00000260753.8	6306	33	0	50949	0	12900	3prime_fragment	FALSE	canonical	1	92019	junction_6	37990.830135736265	NA	0	NA	TRUE	NA	NA	NA	B	coding	583	1749	73	1821	70.0	0	True	AATAGA	-27
PB.9675.1	chr5	+	2457	1	full-splice_match	AC104115.2	ENST00000523026.1	687	1	-1274	-496	-1274	496	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	210	633	1344	1976	100.0	NA	False	NA	NA
PB.9058.13	chr4	-	3692	26	incomplete-splice_match	DDX60	ENST00000393743.7	6071	38	124	39451	121	-3170	3prime_fragment	FALSE	canonical	1	52704	junction_25	23609.700578397853	NA	1	NA	TRUE	NA	NA	NA	C	coding	1174	3522	169	3690	55.0	115	False	GATAAA	-33
PB.1530.1	chr10	+	2127	16	incomplete-splice_match	KIF20B	ENST00000260753.8	6306	33	0	48473	0	15376	3prime_fragment	FALSE	canonical	1	92019	junction_6	37607.38883192444	NA	3	1	TRUE	NA	NA	NA	B	coding	685	2055	73	2127	60.0	0	True	ATTAAA	-13
PB.1530.2	chr10	+	2463	19	incomplete-splice_match	KIF20B	ENST00000260753.8	6306	33	-23	41940	-23	21909	3prime_fragment	TRUE	canonical	1	89789	junction_17	38646.43203245943	NA	0	NA	TRUE	NA	NA	NA	B	coding	789	2367	96	2462	70.0	-23	True	AATGAA	-44
PB.1530.3	chr10	+	3253	20	incomplete-splice_match	KIF20B	ENST00000260753.8	6306	33	4	36793	-3	27056	3prime_fragment	FALSE	canonical	1	89789	junction_17	38458.206196472755	NA	0	NA	TRUE	NA	NA	NA	B	coding	1061	3183	69	3251	60.0	4	True	AGTAAA	-28
PB.4254.10	chr16	-	1356	9	full-splice_match	RSL1D1	ENST00000571133.5	5483	9	12	4115	7	1	multi-exon	FALSE	canonical	1	1129263	junction_7	480402.67578588106	NA	0	NA	TRUE	NA	NA	NA	C	coding	431	1293	62	1354	60.0	-2	True	NA	NA
PB.4254.11	chr16	-	1064	8	incomplete-splice_match	RSL1D1	ENST00000571133.5	5483	9	13	5987	8	12	3prime_fragment	FALSE	canonical	1	1129263	junction_6	347625.87038753874	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1002	61	1062	50.0	-1	True	AAGAAA	-9
PB.7792.2	chr22	-	3678	6	full-splice_match	CBX7	ENST00000401405.7	784	6	-95	-2799	1	-13	multi-exon	TRUE	canonical	1	23790	junction_2	65693.37715295203	NA	2	NA	TRUE	NA	NA	NA	C	coding	158	477	96	572	60.0	38	True	ATTAAA	-20
PB.5724.1	chr19	+	2709	10	novel_in_catalog	PLPPR2	novel	2727	10	NA	NA	-6	-2	combination_of_known_junctions	TRUE	canonical	1	132988	junction_1	90982.85141229148	NA	0	NA	TRUE	NA	NA	NA	C	coding	452	1359	345	1703	15.0	-14	True	AATAAA	-42
PB.6600.2	chr2	+	1550	3	novel_in_catalog	ATOH8	novel	1893	3	NA	NA	-29	-7	combination_of_known_junctions	FALSE	canonical	1	1174	junction_1	62504.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	104	315	484	798	40.0	0	True	AGTAAA	-15
PB.6600.1	chr2	+	2746	3	novel_not_in_catalog	ATOH8	novel	1893	3	NA	NA	-43	5	any annotated donor/acceptor	FALSE	canonical	1	1174	junction_1	1237.5	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-66	False	NA	NA
PB.4467.50	chr16	-	4706	30	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	1	-10	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_29	202334.69722143764	NA	0	NA	TRUE	NA	NA	NA	C	coding	1316	3951	708	4658	50.0	-6	True	NA	NA
PB.4467.51	chr16	-	4686	30	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	-1	-10	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_29	216830.32329736857	NA	1	NA	TRUE	NA	NA	NA	C	coding	1311	3936	703	4638	50.0	-1	True	NA	NA
PB.4467.52	chr16	-	4977	31	full-splice_match	CNOT1	ENST00000441024.6	4999	31	12	10	-1	-10	multi-exon	FALSE	canonical	1	316180	junction_30	176111.74243577727	NA	8	1	TRUE	NA	NA	NA	C	coding	1551	4656	274	4929	50.0	-1	True	NA	NA
PB.4467.53	chr16	-	3171	17	novel_in_catalog	CNOT1	novel	8471	49	NA	NA	2	-1851	no_combination_of_known_junctions	FALSE	canonical	1	1228	junction_16	186388.19313304784	NA	0	NA	TRUE	NA	NA	NA	C	coding	554	1665	707	2371	0.0	-5	True	AATAAA	-18
PB.5724.3	chr19	+	2681	10	full-splice_match	PLPPR2	ENST00000251473.9	2727	10	44	2	-1	-2	multi-exon	FALSE	canonical	1	132988	junction_1	83944.62036160697	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	333	1364	15.0	-2	True	AATAAA	-42
PB.6900.9	chr2	+	2038	10	incomplete-splice_match	PMS1	ENST00000441310.6	3225	13	95	13843	-13	-328	3prime_fragment	FALSE	canonical	1	115835	junction_1	37757.55094786004	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1899	139	2037	50.0	-36	True	ACTAAA	-23
PB.6187.7	chr19	-	2776	5	novel_in_catalog	ZNF83	novel	810	6	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	2350	junction_2	62613.99478750737	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	591	2141	35.0	-1	True	AATAAA	-14
PB.6187.6	chr19	-	4352	7	novel_not_in_catalog	ZNF83	novel	810	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_2	52608.35146205929	NA	2	1	TRUE	NA	NA	NA	C	coding	516	1551	2167	3717	35.0	-6	True	AATAAA	-14
PB.11019.10	chr8	+	4560	9	novel_in_catalog	SLC39A14	novel	4641	9	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	1	2381	junction_1	194626.6596640861	NA	2	NA	TRUE	NA	NA	NA	C	coding	492	1479	107	1585	30.0	1	True	AATAAA	-13
PB.6187.4	chr19	-	2679	4	full-splice_match	ZNF83	ENST00000536937.5	2726	4	36	11	0	0	multi-exon	FALSE	canonical	1	64027	junction_1	27404.443390726905	NA	2	NA	TRUE	NA	NA	NA	C	coding	516	1551	493	2043	35.0	-1	True	AATAAA	-15
PB.6187.3	chr19	-	2554	3	full-splice_match	ZNF83	ENST00000301096.7	2599	3	36	9	0	1	multi-exon	FALSE	canonical	1	4979	junction_1	48596.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	366	1916	35.0	-1	True	AATAAA	-17
PB.6187.2	chr19	-	2807	5	full-splice_match	ZNF83	ENST00000597161.5	509	5	0	-2298	0	3	multi-exon	FALSE	canonical	1	1814	junction_2	62827.08862624465	NA	0	NA	TRUE	NA	NA	NA	C	coding	516	1551	617	2167	40.0	-1	True	AATAAA	-19
PB.6187.1	chr19	-	3037	4	full-splice_match	ZNF83	ENST00000536937.5	2726	4	28	-339	2	339	multi-exon	FALSE	canonical	1	64027	junction_1	27404.443390726905	NA	1	NA	TRUE	NA	NA	NA	C	coding	516	1551	501	2051	90.0	-9	True	NA	NA
PB.10883.2	chr7	-	3815	20	full-splice_match	KDM7A	ENST00000397560.6	9272	20	-14	5471	-14	686	multi-exon	FALSE	canonical	1	52465	junction_19	35964.676735933856	NA	2	NA	TRUE	NA	NA	NA	C	coding	941	2826	113	2938	20.0	-18	True	ATTAAA	-23
PB.10883.3	chr7	-	1898	14	incomplete-splice_match	KDM7A	ENST00000397560.6	9272	20	12	14239	12	-8082	3prime_fragment	FALSE	canonical	1	52465	junction_13	39670.18006859253	NA	1	NA	TRUE	NA	NA	NA	C	coding	604	1812	87	1898	60.0	8	True	NA	NA
PB.10883.1	chr7	-	4288	20	full-splice_match	KDM7A	ENST00000397560.6	9272	20	51	4933	51	1224	multi-exon	FALSE	canonical	1	52465	junction_19	35964.676735933856	NA	1	NA	TRUE	NA	NA	NA	C	coding	941	2826	48	2873	20.0	-2	True	ACTAAA	-20
PB.6187.9	chr19	-	2952	1	novel_in_catalog	ZNF83	novel	810	6	NA	NA	-3997	14634	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	5805	False	NA	NA
PB.5724.4	chr19	+	2603	10	novel_in_catalog	PLPPR2	novel	2727	10	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	71213	junction_3	108971.6314090535	NA	1	1	TRUE	NA	NA	NA	C	coding	318	957	330	1286	15.0	1	True	AATAAA	-42
PB.10902.2	chr7	-	2250	3	novel_in_catalog	AC074386.1	novel	767	3	NA	NA	-17	-80953	no_combination_of_known_junctions	FALSE	canonical	1	790	junction_2	357.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	107	324	489	812	15.0	NA	False	NA	NA
PB.10902.1	chr7	-	2992	3	novel_in_catalog	AC074386.1	novel	767	3	NA	NA	33	-80232	no_combination_of_known_junctions	FALSE	canonical	1	790	junction_2	357.0	NA	0	NA	TRUE	NA	NA	NA	B	coding	107	324	510	833	35.0	NA	False	ATTAAA	-19
PB.8519.16	chr3	-	3711	27	novel_in_catalog	PLD1	novel	5855	26	NA	NA	12	-1976	combination_of_known_junctions	FALSE	canonical	1	17429	junction_26	30311.862458225667	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	211	3435	35.0	3	True	AGTAAA	-20
PB.8519.17	chr3	-	3549	26	full-splice_match	PLD1	ENST00000356327.9	5855	26	-91	2397	-35	-1976	multi-exon	FALSE	canonical	1	54243	junction_11	21743.961991725428	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	163	3273	35.0	806	False	AGTAAA	-20
PB.8519.14	chr3	-	3595	27	full-splice_match	PLD1	ENST00000351298.8	5604	27	32	1977	0	-1977	multi-exon	FALSE	canonical	1	33576	junction_11	26456.684381485495	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	96	3320	35.0	1	True	AGTAAA	-19
PB.8519.15	chr3	-	3630	26	novel_in_catalog	PLD1	novel	5855	26	NA	NA	12	-1917	combination_of_known_junctions	FALSE	canonical	1	17429	junction_25	26699.16353038799	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	185	3295	30.0	-22	True	NA	NA
PB.8519.12	chr3	-	5340	26	novel_in_catalog	PLD1	novel	694	3	NA	NA	9	-22	intron_retention	FALSE	canonical	1	358	junction_13	33308.773114265256	NA	0	NA	TRUE	NA	NA	NA	C	coding	1007	3024	87	3110	50.0	10	True	NA	NA
PB.8519.13	chr3	-	5388	26	novel_in_catalog	PLD1	novel	694	3	NA	NA	8	-41	intron_retention	FALSE	canonical	1	796	junction_3	33206.56161582526	NA	1	NA	TRUE	NA	NA	NA	C	coding	1029	3090	88	3177	50.0	9	True	NA	NA
PB.8519.10	chr3	-	5612	27	novel_not_in_catalog	PLD1	novel	694	3	NA	NA	12624	-9	intron_retention	FALSE	canonical	1	770	junction_26	32163.67501129572	NA	0	NA	TRUE	NA	NA	NA	C	coding	1074	3225	145	3369	45.0	5359	False	NA	NA
PB.8519.11	chr3	-	5439	26	novel_not_in_catalog	PLD1	novel	694	3	NA	NA	12679	-13	intron_retention	FALSE	canonical	1	770	junction_25	28937.992702079388	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	90	3200	50.0	5414	False	NA	NA
PB.6046.2	chr19	-	2805	5	novel_in_catalog	ZNF404	novel	1851	3	NA	NA	-443	0	no_combination_of_known_junctions	FALSE	canonical	1	9307	junction_4	11135.564040496556	NA	2	NA	TRUE	NA	NA	NA	B	coding	552	1659	959	2617	35.0	-24	True	AATAAA	-13
PB.6046.1	chr19	-	3064	7	novel_not_in_catalog	ZNF404	novel	1851	3	NA	NA	-441	0	any annotated donor/acceptor	FALSE	canonical	1	249	junction_4	13787.506841944509	NA	2	NA	TRUE	NA	NA	NA	B	coding	518	1557	1320	2876	35.0	-22	True	AATAAA	-13
PB.8519.18	chr3	-	3033	25	novel_in_catalog	PLD1	novel	5855	26	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	6240	junction_1	28585.522459294552	NA	0	NA	TRUE	NA	NA	NA	C	coding	933	2802	98	2899	15.0	-1	True	AATAAA	-20
PB.8519.19	chr3	-	3251	26	novel_in_catalog	PLD1	novel	5855	26	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	6240	junction_1	34808.53364394427	NA	0	NA	TRUE	NA	NA	NA	C	coding	971	2916	203	3118	20.0	6402	False	AATAAA	-19
PB.8752.2	chr4	-	6562	16	novel_in_catalog	APBB2	novel	8972	18	NA	NA	-28	-2279	combination_of_known_junctions	FALSE	canonical	1	43553	junction_13	64784.86655371162	NA	1	NA	TRUE	NA	NA	NA	C	coding	738	2217	561	2777	30.0	3	True	AATAAA	-12
PB.4284.1	chr16	+	2004	4	novel_not_in_catalog	AC099518.3	novel	809	6	NA	NA	54184	11226	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	37267.46459789766	NA	5	1	TRUE	NA	NA	NA	A	coding	272	819	580	1398	30.0	-29	True	TATAAA	-17
PB.12071.4	chrX	-	1963	11	novel_not_in_catalog	OTUD5	novel	2682	10	NA	NA	6	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	318162.77788718464	NA	2	NA	TRUE	NA	NA	NA	C	coding	376	1131	524	1654	65.0	2	True	ATTAAA	-16
PB.12071.3	chrX	-	2228	9	full-splice_match	OTUD5	ENST00000428668.2	1493	9	-3	-732	-3	0	multi-exon	FALSE	canonical	1	11344	junction_8	304046.6305959499	NA	0	NA	TRUE	NA	NA	NA	C	coding	349	1050	216	1265	10.0	-9	True	AATAAA	-17
PB.12071.2	chrX	-	2620	10	novel_not_in_catalog	OTUD5	novel	2682	10	NA	NA	3	2	intron_retention	FALSE	non_canonical	0	0	junction_9	294773.0387682892	NA	1	NA	TRUE	NA	NA	NA	C	coding	542	1629	27	1655	10.0	-1	True	AATAAA	-19
PB.8696.8	chr4	-	2467	18	novel_not_in_catalog	ACOX3	novel	2860	18	NA	NA	4686	-2	any annotated donor/acceptor	FALSE	canonical	1	7435	junction_17	36532.94481380013	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	118	2220	5.0	4697	False	AAGAAA	-22
PB.6676.1	chr2	+	1987	3	novel_not_in_catalog	NCK2	novel	2683	5	NA	NA	13	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	171202.0	NA	6	1	TRUE	NA	NA	NA	C	coding	240	723	171	893	20.0	-2	True	AATAAA	-16
PB.6676.2	chr2	+	2542	5	full-splice_match	NCK2	ENST00000233154.8	2683	5	137	4	-29	-2	multi-exon	FALSE	canonical	1	111526	junction_1	144678.4162761934	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	306	1448	20.0	122	False	AATAAA	-16
PB.6676.3	chr2	+	2521	5	novel_not_in_catalog	NCK2	novel	2683	5	NA	NA	-20860	-2	any annotated donor/acceptor	FALSE	canonical	1	507	junction_1	189106.61316172947	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	285	1427	20.0	9741	False	AATAAA	-16
PB.981.11	chr1	+	5798	23	novel_in_catalog	SMG7	novel	1190	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	6339	junction_1	130716.84029159434	NA	2	NA	TRUE	NA	NA	NA	C	coding	1099	3300	240	3539	20.0	-10	True	ATTAAA	-18
PB.3001.3	chr12	+	2156	14	full-splice_match	DDX55	ENST00000238146.8	2654	14	9	489	9	30	multi-exon	FALSE	canonical	1	96941	junction_1	69070.93901089049	NA	0	NA	TRUE	NA	NA	NA	C	coding	600	1803	42	1844	80.0	9	True	NA	NA
PB.3001.2	chr12	+	1766	12	novel_in_catalog	DDX55	novel	2767	11	NA	NA	5	-39	intron_retention	FALSE	canonical	1	4289	junction_1	77768.21532812949	NA	5	NA	TRUE	NA	NA	NA	C	coding	429	1287	479	1765	85.0	5	True	AATAAA	-23
PB.3001.1	chr12	+	2660	14	full-splice_match	DDX55	ENST00000238146.8	2654	14	-4	-2	-2	2	multi-exon	FALSE	canonical	1	96941	junction_1	69070.93901089049	NA	1	NA	TRUE	NA	NA	NA	C	coding	600	1803	55	1857	30.0	-4	True	AATAAA	-21
PB.8696.3	chr4	-	2536	18	full-splice_match	ACOX3	ENST00000503233.5	2253	18	8	-291	8	42	multi-exon	FALSE	canonical	1	83401	junction_17	23256.210164258326	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	143	2245	10.0	7472	False	NA	NA
PB.3001.7	chr12	+	1783	14	novel_not_in_catalog	DDX55	novel	2767	11	NA	NA	5	-40	any annotated donor/acceptor	FALSE	canonical	1	2751	junction_2	88972.80841973392	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1449	335	1783	85.0	-28	False	AATAAA	-22
PB.3001.6	chr12	+	1669	13	novel_not_in_catalog	DDX55	novel	2767	11	NA	NA	0	-40	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	80267.78705353862	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	20	1255	85.0	31	True	AATAAA	-22
PB.3001.5	chr12	+	1600	13	incomplete-splice_match	DDX55	ENST00000238146.8	2654	14	28	1265	-1	-40	3prime_fragment	FALSE	canonical	1	96941	junction_1	56842.888749507525	NA	1	NA	TRUE	NA	NA	NA	C	coding	526	1578	23	1600	85.0	28	True	AATAAA	-22
PB.3001.4	chr12	+	1548	13	novel_in_catalog	DDX55	novel	2767	11	NA	NA	-10	-40	combination_of_known_junctions	FALSE	canonical	1	40786	junction_6	71852.5325096865	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	840	709	1548	85.0	16	True	AATAAA	-22
PB.2773.8	chr12	+	4605	17	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	-4	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	104893.3674791184	NA	4	1	TRUE	NA	NA	NA	B	coding	400	1203	694	1896	20.0	-9	True	AATAAA	-12
PB.2773.9	chr12	+	2876	13	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	0	2383	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	111591.27495347947	NA	2	1	TRUE	NA	NA	NA	B	coding	193	582	14	595	80.0	-4	True	NA	NA
PB.6197.2	chr19	+	6114	4	full-splice_match	ZNF525	ENST00000474037.5	3890	4	22	-2246	2	0	multi-exon	FALSE	canonical	1	21324	junction_2	7904.063778982443	NA	3	NA	TRUE	NA	NA	NA	C	coding	479	1440	113	1552	60.0	-12	True	AATAAA	-19
PB.5741.1	chr19	-	2637	4	full-splice_match	ZNF44	ENST00000355684.5	2119	4	-2	-516	-2	-1	multi-exon	FALSE	canonical	1	42111	junction_3	21828.886676959857	NA	1	NA	TRUE	NA	NA	NA	C	coding	615	1848	196	2043	35.0	-7	True	NA	NA
PB.6197.4	chr19	+	5849	5	novel_not_in_catalog	ZNF525	novel	537	3	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	15450.556373477299	NA	3	1	TRUE	NA	NA	NA	C	coding	479	1440	102	1541	60.0	-1	True	AATAAA	-19
PB.6197.5	chr19	+	5515	4	full-splice_match	ZNF525	ENST00000474037.5	3890	4	33	-1658	-3	-588	multi-exon	FALSE	canonical	1	21324	junction_2	7904.063778982443	NA	1	NA	TRUE	NA	NA	NA	C	coding	479	1440	102	1541	60.0	-1	True	NA	NA
PB.2773.1	chr12	+	4605	17	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	-1	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	85052.57132243912	NA	2	1	TRUE	NA	NA	NA	B	coding	623	1872	16	1887	25.0	-6	True	AATAAA	-21
PB.2773.2	chr12	+	4485	16	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	0	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	97120.59846786136	NA	2	1	TRUE	NA	NA	NA	B	coding	583	1752	26	1777	20.0	0	True	AATAAA	-11
PB.2773.3	chr12	+	4616	17	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	-49	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	104387.62290465088	NA	5	1	TRUE	NA	NA	NA	B	coding	361	1086	823	1908	20.0	-2202	False	AATAAA	-11
PB.2773.4	chr12	+	4774	17	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	-7	161	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	85052.57132243912	NA	2	1	TRUE	NA	NA	NA	B	coding	633	1902	1	1902	75.0	-2160	False	AATAAA	-19
PB.2773.5	chr12	+	3209	16	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	-7	1004	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	97120.59846786136	NA	1	1	TRUE	NA	NA	NA	B	coding	583	1752	47	1798	5.0	-2160	False	TATAAA	-20
PB.2773.6	chr12	+	7290	16	novel_not_in_catalog	ZDHHC17	novel	5259	17	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	94983.79165371088	NA	14	1	TRUE	NA	NA	NA	B	coding	193	582	24	605	20.0	-14	True	AATAAA	-12
PB.2773.7	chr12	+	2205	11	novel_in_catalog	ZDHHC17	novel	5259	17	NA	NA	3	2438	combination_of_known_junctions	FALSE	canonical	1	43930	junction_7	99097.64919996842	NA	1	NA	TRUE	NA	NA	NA	B	coding	256	771	21	791	95.0	-11	True	NA	NA
PB.12065.1	chrX	+	1815	12	full-splice_match	WAS	ENST00000376701.4	1849	12	31	3	-9	-3	multi-exon	FALSE	canonical	1	285166	junction_9	78730.8847822444	NA	0	NA	TRUE	NA	NA	NA	C	coding	497	1494	60	1553	30.0	-8	True	AATAAA	-25
PB.12065.2	chrX	+	2764	12	novel_not_in_catalog	WAS	novel	933	9	NA	NA	-1	-3	any annotated donor/acceptor	FALSE	canonical	1	37997	junction_11	147673.68645896317	NA	0	NA	TRUE	NA	NA	NA	C	coding	585	1758	52	1809	30.0	0	True	AATAAA	-25
PB.186.2	chr1	+	3976	11	incomplete-splice_match	SELENON	ENST00000374315.1	4212	12	862	3	862	-1	5prime_fragment	FALSE	canonical	1	421303	junction_1	103827.78103133092	NA	2	NA	TRUE	NA	NA	NA	C	coding	343	1032	58	1089	30.0	-7615	False	AATAAA	-13
PB.143.1	chr1	+	2448	8	full-splice_match	PINK1	ENST00000321556.4	2660	8	17	195	17	0	multi-exon	FALSE	canonical	1	534729	junction_1	144593.64310736908	NA	0	NA	TRUE	NA	NA	NA	A	coding	581	1746	78	1823	25.0	-6	True	ATTAAA	-18
PB.8038.15	chr3	+	3309	16	full-splice_match	CTNNB1	ENST00000647390.1	2784	16	19	-544	0	1	multi-exon	FALSE	canonical	1	19514	junction_1	830196.3168022904	NA	2	NA	TRUE	NA	NA	NA	C	coding	781	2346	167	2512	10.0	0	True	ATTAAA	-16
PB.981.17	chr1	+	4008	22	full-splice_match	SMG7	ENST00000347615.6	5788	22	-2	1782	0	141	multi-exon	FALSE	canonical	1	129392	junction_1	104469.04996519489	NA	1	NA	TRUE	NA	NA	NA	C	coding	1137	3414	122	3535	40.0	-7	True	NA	NA
PB.1021.12	chr1	+	4168	11	novel_in_catalog	NEK7	novel	4149	10	NA	NA	21	-37	combination_of_known_junctions	FALSE	canonical	1	8484	junction_1	232810.92082909253	NA	4	NA	TRUE	NA	NA	NA	C	coding	302	909	399	1307	80.0	21	True	AAAAAG	-43
PB.5762.3	chr19	-	1655	1	novel_in_catalog	FARSA	novel	2057	14	NA	NA	0	-1750	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	122	369	16	384	100.0	-1	True	NA	NA
PB.5762.2	chr19	-	1808	13	full-splice_match	FARSA	ENST00000314606.8	1814	13	6	0	2	0	multi-exon	FALSE	canonical	1	870505	junction_12	209724.7766735013	NA	5	NA	TRUE	NA	NA	NA	C	coding	508	1527	14	1540	10.0	1	True	AATAAA	-17
PB.5762.1	chr19	-	2041	13	full-splice_match	FARSA	ENST00000314606.8	1814	13	-23	-204	-23	203	multi-exon	FALSE	canonical	1	870505	junction_12	209724.7766735013	NA	0	NA	TRUE	NA	NA	NA	C	coding	508	1527	43	1569	90.0	9875	False	NA	NA
PB.6313.1	chr2	-	2325	13	novel_not_in_catalog	AC092687.3	novel	393	3	NA	NA	-42776	52	intron_retention	TRUE	canonical	1	6069	junction_2	1483073.3856362526	NA	0	NA	TRUE	NA	NA	NA	A	coding	448	1347	139	1485	70.0	-27	False	CATAAA	-9
PB.6313.6	chr2	-	2419	12	novel_in_catalog	PDIA6	novel	2338	13	NA	NA	-33	1	intron_retention	FALSE	canonical	1	2355670	junction_10	729506.3590239387	NA	0	NA	TRUE	NA	NA	NA	C	coding	435	1308	92	1399	45.0	20	False	AATAAA	-19
PB.6313.7	chr2	-	1704	12	novel_in_catalog	PDIA6	novel	2338	13	NA	NA	-23	0	no_combination_of_known_junctions	FALSE	canonical	1	21375	junction_1	1237573.8457695872	NA	1	NA	TRUE	NA	NA	NA	C	coding	402	1209	82	1290	40.0	-24	True	AATAAA	-18
PB.6313.5	chr2	-	1845	13	full-splice_match	PDIA6	ENST00000272227.7	2338	13	23	470	18	0	multi-exon	FALSE	canonical	1	2355670	junction_11	699352.1366059488	NA	0	NA	TRUE	NA	NA	NA	C	coding	440	1323	126	1448	40.0	-14	True	AATAAA	-18
PB.9528.3	chr5	+	2494	6	full-splice_match	RELL2	ENST00000518025.5	2461	6	-32	-1	23	1	multi-exon	FALSE	canonical	1	52892	junction_2	49916.019378952886	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	1254	1700	10.0	-24	True	AATAAA	-18
PB.9528.2	chr5	+	2067	7	novel_in_catalog	RELL2	novel	2329	5	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	1	52892	junction_3	56903.82608304022	NA	0	NA	TRUE	NA	NA	NA	C	coding	148	447	827	1273	10.0	-25	True	AATAAA	-18
PB.9528.1	chr5	+	2581	7	full-splice_match	RELL2	ENST00000297164.7	2520	7	-62	1	14	-1	multi-exon	TRUE	canonical	1	146812	junction_2	16702.826607094583	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	1263	2174	15.0	-33	True	AATAAA	-29
PB.6313.9	chr2	-	1078	10	incomplete-splice_match	PDIA6	ENST00000272227.7	2338	13	45	5329	40	-4859	3prime_fragment	FALSE	canonical	1	2355670	junction_8	768068.1203329414	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	975	104	1078	65.0	8	True	NA	NA
PB.6270.2	chr19	+	3538	3	novel_not_in_catalog	ZSCAN22	novel	4629	3	NA	NA	7	-1079	any annotated donor/acceptor	FALSE	canonical	1	3520	junction_1	8398.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	136	1611	15.0	7	True	NA	NA
PB.6270.3	chr19	+	5757	3	novel_not_in_catalog	ZSCAN22	novel	4629	3	NA	NA	291	-6	any annotated donor/acceptor	FALSE	canonical	1	2227	junction_1	9045.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	491	1476	1282	2757	55.0	291	False	NA	NA
PB.6270.1	chr19	+	4661	3	full-splice_match	ZSCAN22	ENST00000329665.4	4629	3	-24	-8	-24	8	multi-exon	FALSE	canonical	1	17118	junction_1	1599.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	491	1476	172	1647	55.0	-24	False	NA	NA
PB.8136.3	chr3	-	3024	4	novel_in_catalog	NPRL2	novel	1643	10	NA	NA	13	0	intron_retention	FALSE	canonical	1	390058	junction_2	10204.25894745261	NA	19	1	TRUE	NA	NA	NA	C	coding	164	495	1738	2232	10.0	-37	True	AATAAA	-20
PB.11621.18	chr9	-	1997	8	novel_not_in_catalog	UBQLN1	novel	4118	11	NA	NA	-48	-6275	any annotated donor/acceptor	FALSE	canonical	1	19273	junction_1	403948.1132089383	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	304	1653	30.0	261	False	NA	NA
PB.8136.2	chr3	-	1406	11	full-splice_match	NPRL2	ENST00000232501.7	1700	11	295	-1	-14	1	multi-exon	FALSE	canonical	1	215325	junction_9	65187.03055485807	NA	2	NA	TRUE	NA	NA	NA	C	coding	380	1143	145	1287	10.0	-25	True	AATAAA	-21
PB.6802.47	chr2	-	3740	1	genic	LY75_LY75-CD302	novel	NA	NA	NA	NA	-9	1346	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	80	243	77	319	60.0	-3	True	NA	NA
PB.4305.9	chr16	+	4658	19	novel_not_in_catalog	EEF2K	novel	7388	18	NA	NA	-3	-940	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	58062.323834919924	NA	3	NA	TRUE	NA	NA	NA	C	coding	725	2178	478	2655	35.0	-8	True	TATAAA	-16
PB.4305.8	chr16	+	2912	18	full-splice_match	EEF2K	ENST00000263026.9	7388	18	-4	4480	-4	-2981	multi-exon	FALSE	canonical	1	93482	junction_1	38858.3954454524	NA	1	NA	TRUE	NA	NA	NA	C	coding	725	2178	479	2656	5.0	-9	True	AATGAA	-7
PB.772.1	chr1	+	1854	10	novel_in_catalog	CREB3L4	novel	568	3	NA	NA	-74	1	combination_of_known_junctions	TRUE	canonical	1	16904	junction_1	130606.3258632834	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	430	1557	40.0	-811	False	AATAAA	-18
PB.4305.1	chr16	+	5322	18	full-splice_match	EEF2K	ENST00000263026.9	7388	18	-35	2101	-35	-602	multi-exon	FALSE	canonical	1	93482	junction_1	38858.3954454524	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	510	2687	10.0	-1152	False	NA	NA
PB.4305.3	chr16	+	4259	19	novel_not_in_catalog	EEF2K	novel	7388	18	NA	NA	-18	-602	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	58062.323834919924	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	493	2670	10.0	-23	True	NA	NA
PB.4305.2	chr16	+	3895	19	novel_not_in_catalog	EEF2K	novel	7388	18	NA	NA	-22	-603	any annotated donor/acceptor	TRUE	canonical	1	59	junction_18	58052.05886909919	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	497	2674	15.0	-27	True	NA	NA
PB.4305.5	chr16	+	5002	19	novel_not_in_catalog	EEF2K	novel	7388	18	NA	NA	-14	-603	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	58062.323834919924	NA	2	NA	TRUE	NA	NA	NA	C	coding	725	2178	489	2666	15.0	-19	True	NA	NA
PB.4305.4	chr16	+	4797	19	novel_not_in_catalog	EEF2K	novel	7388	18	NA	NA	-17	-809	any annotated donor/acceptor	FALSE	canonical	1	2830	junction_18	57571.46536251838	NA	1	NA	TRUE	NA	NA	NA	C	coding	725	2178	492	2669	25.0	-22	True	NA	NA
PB.4305.7	chr16	+	2810	18	full-splice_match	EEF2K	ENST00000263026.9	7388	18	-9	4587	-9	-3088	multi-exon	FALSE	canonical	1	93482	junction_1	38858.3954454524	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	484	2661	25.0	-14	True	NA	NA
PB.4305.6	chr16	+	4860	19	novel_not_in_catalog	EEF2K	novel	7388	18	NA	NA	-9	-603	any annotated donor/acceptor	FALSE	canonical	1	600	junction_18	57957.99651663455	NA	2	1	TRUE	NA	NA	NA	C	coding	725	2178	484	2661	15.0	-14	True	NA	NA
PB.6802.48	chr2	-	2755	2	full-splice_match	LY75	ENST00000492955.1	1402	2	-7	-1346	-7	1346	multi-exon	FALSE	canonical	1	22116	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-1	True	NA	NA
PB.38.9	chr1	+	2822	8	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	4236	junction_1	188681.59610371353	NA	2	1	TRUE	NA	NA	NA	C	coding	199	600	1748	2347	5.0	1	True	NA	NA
PB.3380.2	chr14	-	2944	4	full-splice_match	CFL2	ENST00000298159.10	6747	4	102	3701	-11	-83	multi-exon	FALSE	canonical	1	540307	junction_3	207700.68591766054	NA	38	NA	TRUE	NA	NA	NA	C	coding	166	501	49	549	75.0	4	True	NA	NA
PB.3380.5	chr14	-	2793	4	full-splice_match	CFL2	ENST00000554470.5	1387	4	132	-1538	-1	-83	multi-exon	FALSE	canonical	1	30855	junction_2	414364.88207697653	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	236	False	NA	NA
PB.38.2	chr1	+	1571	9	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	12340	junction_1	176990.4360210955	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	167	1018	20.0	-4127	False	NA	NA
PB.38.3	chr1	+	2256	8	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	34641	junction_6	219779.9938298223	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	892	1485	5.0	-4118	False	NA	NA
PB.38.4	chr1	+	1623	9	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	1	46397	junction_1	166990.582914829	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	219	1070	20.0	0	True	NA	NA
PB.9981.1	chr6	-	3257	4	novel_not_in_catalog	TREM1	novel	772	4	NA	NA	-14921	1599	any annotated donor/acceptor	FALSE	canonical	1	204	junction_3	51419.739925441085	NA	0	NA	TRUE	NA	NA	NA	A	coding	172	519	219	737	20.0	NA	False	NA	NA
PB.38.6	chr1	+	3312	8	novel_in_catalog	TNFRSF14	novel	660	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	55364	junction_3	220024.26209490662	NA	0	NA	TRUE	NA	NA	NA	C	coding	185	558	865	1422	5.0	0	True	NA	NA
PB.3380.4	chr14	-	2843	4	full-splice_match	CFL2	ENST00000422678.2	1223	4	-53	-1567	-53	-83	multi-exon	FALSE	canonical	1	42766	junction_2	409505.53167149716	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	297	False	NA	NA
PB.6058.4	chr19	+	3013	6	full-splice_match	ZNF227	ENST00000621083.4	3055	6	10	32	0	-32	multi-exon	FALSE	canonical	1	20011	junction_1	33529.35922680301	NA	1	NA	TRUE	NA	NA	NA	C	coding	799	2400	209	2608	65.0	0	True	NA	NA
PB.6058.5	chr19	+	2868	4	novel_in_catalog	ZNF227	novel	485	2	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	12738	junction_3	7490.253711768825	NA	0	NA	TRUE	NA	NA	NA	C	coding	702	2109	327	2435	30.0	27	True	AATAAA	-16
PB.6058.2	chr19	+	2986	5	full-splice_match	ZNF227	ENST00000589005.5	2943	5	-43	0	4	0	multi-exon	FALSE	canonical	1	30962	junction_2	31744.319373708426	NA	2	NA	TRUE	NA	NA	NA	C	coding	702	2109	441	2549	30.0	-6	True	AATAAA	-20
PB.3380.7	chr14	-	1393	4	full-splice_match	CFL2	ENST00000298159.10	6747	4	108	5246	-5	-7	multi-exon	FALSE	canonical	1	540307	junction_3	207700.68591766054	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	43	543	20.0	10	True	AATAAA	-14
PB.6058.1	chr19	+	3352	6	novel_in_catalog	ZNF227	novel	485	2	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	1	1511	junction_1	40675.769324746645	NA	37	1	TRUE	NA	NA	NA	C	coding	799	2400	517	2916	30.0	-5139	False	AATAAA	-19
PB.3380.6	chr14	-	2755	4	full-splice_match	CFL2	ENST00000298159.10	6747	4	18	3974	18	-356	multi-exon	FALSE	canonical	1	540307	junction_3	207700.68591766054	NA	6	NA	TRUE	NA	NA	NA	C	coding	166	501	133	633	25.0	-1	True	ATTAAA	-16
PB.6802.49	chr2	-	2678	1	genic	LY75_LY75-CD302	novel	NA	NA	NA	NA	-18	275	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	80	243	86	328	50.0	-12	False	AATAAA	-24
PB.42.2	chr1	-	1598	13	novel_not_in_catalog	WRAP73	novel	1998	11	NA	NA	-393	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	76323.51375049645	NA	1	NA	TRUE	NA	NA	NA	C	coding	394	1185	211	1395	30.0	6012	False	AATAAA	-18
PB.42.1	chr1	-	2042	11	full-splice_match	WRAP73	ENST00000378322.7	1998	11	-45	1	-30	-1	multi-exon	FALSE	canonical	1	191395	junction_10	37756.69345374407	NA	1	NA	TRUE	NA	NA	NA	C	coding	435	1308	105	1412	20.0	-1	True	AATAAA	-22
PB.3724.9	chr15	+	2732	9	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	4	11	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	770	1852	35.0	-41	True	AATAAA	-20
PB.3724.8	chr15	+	2042	7	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	1	370	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	15	2	TRUE	NA	NA	NA	C	coding	360	1083	521	1603	25.0	-44	True	AATACA	-24
PB.3724.7	chr15	+	2129	8	full-splice_match	NIPA2	ENST00000337451.7	3233	8	8	1096	8	372	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	606	1688	20.0	-21	True	AATACA	-26
PB.3724.6	chr15	+	3497	8	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	360	1083	882	1964	30.0	-44	True	AATAAA	-17
PB.3724.5	chr15	+	2354	6	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	1	3	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	400	1482	35.0	-47	True	AATAAA	-12
PB.3724.4	chr15	+	2508	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	153	3	intron_retention	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	360	1083	554	1636	35.0	-82	False	AATAAA	-12
PB.3724.3	chr15	+	3119	7	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	360	1083	497	1579	20.0	-48	True	AATAAA	-24
PB.3724.2	chr15	+	2795	9	novel_not_in_catalog	NIPA2	novel	3130	7	NA	NA	-20	3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	841	1923	35.0	-312	False	AATAAA	-12
PB.3724.1	chr15	+	2583	8	novel_in_catalog	NIPA2	novel	3130	7	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	629	1711	35.0	-18	True	AATAAA	-12
PB.8552.21	chr3	+	3782	9	novel_in_catalog	KLHL24	novel	2345	8	NA	NA	4	1463	combination_of_known_junctions	FALSE	canonical	1	10716	junction_1	88096.26189536932	NA	10	NA	TRUE	NA	NA	NA	C	coding	600	1803	325	2127	15.0	16	True	AATAAA	-18
PB.9995.3	chr6	+	2514	7	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	-45	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	84345.6173920732	NA	3	NA	TRUE	NA	NA	NA	C	coding	246	741	64	804	30.0	2	True	AATAAA	-21
PB.9995.2	chr6	+	1300	6	full-splice_match	RPL7L1	ENST00000493763.5	4476	6	274	2902	-11	-16	multi-exon	FALSE	canonical	1	23424	junction_1	76276.63443125949	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	30	770	90.0	-8	False	NA	NA
PB.9995.1	chr6	+	1189	5	incomplete-splice_match	RPL7L1	ENST00000483998.6	1103	6	296	307	-6	-16	3prime_fragment	FALSE	canonical	1	6822	junction_1	90513.74550171924	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	306	659	90.0	-3	True	NA	NA
PB.9995.7	chr6	+	1134	7	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	-9	136914	any annotated donor/acceptor	FALSE	canonical	1	462	junction_6	84248.57029795817	NA	2	NA	TRUE	NA	NA	NA	C	coding	255	768	1	768	60.0	-6	False	NA	NA
PB.9995.6	chr6	+	2415	7	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	-10	-65	any annotated donor/acceptor	FALSE	canonical	1	3409	junction_6	83635.21923939831	NA	1	NA	TRUE	NA	NA	NA	C	coding	246	741	29	769	45.0	-7	False	AATAAA	-10
PB.1457.32	chr10	-	2728	14	novel_not_in_catalog	PSAP	novel	2872	14	NA	NA	75	-248	any annotated donor/acceptor	FALSE	canonical	1	15	junction_7	3766399.079284441	NA	3	1	TRUE	NA	NA	NA	C	coding	261	786	862	1647	5.0	-2	True	AATAAA	-15
PB.9995.4	chr6	+	1887	6	full-splice_match	RPL7L1	ENST00000493763.5	4476	6	268	2321	-17	274	multi-exon	FALSE	canonical	1	23424	junction_1	76276.63443125949	NA	4	NA	TRUE	NA	NA	NA	C	coding	246	741	36	776	65.0	-14	False	NA	NA
PB.9995.9	chr6	+	2425	8	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	-6	-12	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	80930.18646200879	NA	3	1	TRUE	NA	NA	NA	C	coding	246	741	25	765	40.0	-3	True	AATAAA	-44
PB.9995.8	chr6	+	3042	7	novel_not_in_catalog	RPL7L1	novel	1103	6	NA	NA	-6	-70	intron_retention	FALSE	non_canonical	0	0	junction_6	84345.6173920732	NA	4	1	TRUE	NA	NA	NA	C	coding	246	741	25	765	70.0	-3	True	AATAAA	-5
PB.6022.1	chr19	+	509	6	full-splice_match	RPS19	ENST00000598742.5	2359	6	337	1513	0	-3	multi-exon	FALSE	canonical	1	7428635	junction_5	5062104.027819524	NA	0	NA	TRUE	NA	NA	NA	C	coding	145	438	36	473	10.0	0	True	AATAAA	-13
PB.6022.3	chr19	+	1990	6	full-splice_match	RPS19	ENST00000598742.5	2359	6	337	32	0	-32	multi-exon	FALSE	canonical	1	7428635	junction_5	5062104.027819524	NA	2	NA	TRUE	NA	NA	NA	C	coding	145	438	36	473	80.0	0	True	NA	NA
PB.6022.2	chr19	+	2251	4	novel_not_in_catalog	RPS19	novel	2359	6	NA	NA	0	-3721	intron_retention	FALSE	non_canonical	0	0	junction_3	9522953.666720647	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	1718	2050	80.0	0	True	NA	NA
PB.11473.9	chr9	-	1877	3	full-splice_match	PLIN2	ENST00000472715.1	801	3	-2	-1074	-2	947	multi-exon	FALSE	canonical	1	718415	junction_1	158411.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	78	237	97	333	35.0	-1	True	AATAAA	-19
PB.821.15	chr1	-	4981	21	novel_in_catalog	SMG5	novel	4559	22	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	329560	junction_20	107674.87288518152	NA	0	NA	TRUE	NA	NA	NA	C	coding	943	2832	164	2995	10.0	-19	True	AATAAA	-13
PB.821.14	chr1	-	5379	20	novel_in_catalog	SMG5	novel	4559	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	329560	junction_19	107924.71032126043	NA	0	NA	TRUE	NA	NA	NA	C	coding	939	2820	148	2967	10.0	-3	True	AATAAA	-13
PB.2059.1	chr11	+	2119	5	novel_in_catalog	EHBP1L1	novel	5185	19	NA	NA	-1260	-6	intron_retention	FALSE	canonical	1	417998	junction_4	162286.91055407858	NA	0	NA	TRUE	NA	NA	NA	A	coding	128	387	1391	1777	10.0	-137	False	AATAAA	-14
PB.821.16	chr1	-	4582	22	novel_not_in_catalog	SMG5	novel	4559	22	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	3639	junction_7	170844.612282106	NA	0	NA	TRUE	NA	NA	NA	C	coding	833	2502	146	2647	10.0	-1	True	AATAAA	-12
PB.8298.1	chr3	-	2469	2	incomplete-splice_match	CCDC80	ENST00000206423.7	12430	8	126	41471	0	1135	3prime_fragment	FALSE	canonical	1	667384	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	543	1629	841	2469	70.0	-1	True	AAAAAG	-42
PB.6316.5	chr2	-	2446	8	novel_not_in_catalog	E2F6	novel	3139	7	NA	NA	3	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	17315.48807824241	NA	0	NA	TRUE	NA	NA	NA	B	coding	206	621	648	1268	35.0	-8	False	NA	NA
PB.11621.10	chr9	-	2711	11	full-splice_match	UBQLN1	ENST00000376395.8	4118	11	492	915	-110	551	multi-exon	FALSE	canonical	1	863295	junction_9	174628.50651279703	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	33	1802	30.0	-18	True	ATTAAA	-28
PB.11480.3	chr9	-	2997	4	intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	10223.592073673954	NA	0	NA	FALSE	NA	NA	NA	A	coding	608	1827	594	2420	30.0	-30	False	NA	NA
PB.3374.1	chr14	-	4079	1	full-splice_match	ARHGAP5-AS1	ENST00000553596.2	1848	1	208	-2439	208	2439	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-18
PB.11480.6	chr9	-	2997	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	1361	1352	1361	-1352	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	336	1011	4	1014	15.0	1376	False	NA	NA
PB.3374.2	chr14	-	2534	1	full-splice_match	ARHGAP5-AS1	ENST00000553596.2	1848	1	176	-862	176	862	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-14
PB.11473.3	chr9	-	2371	8	full-splice_match	PLIN2	ENST00000276914.6	1972	8	45	-444	-41	444	multi-exon	FALSE	canonical	1	436806	junction_4	239160.48830619396	NA	7	NA	TRUE	NA	NA	NA	C	coding	437	1314	136	1449	95.0	-40	False	NA	NA
PB.11480.4	chr9	-	2882	3	intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	4663	junction_2	9400.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	608	1827	599	2425	30.0	-35	False	NA	NA
PB.9563.1	chr5	+	4101	15	novel_not_in_catalog	NDST1	novel	777	2	NA	NA	78	555	any annotated donor/acceptor	FALSE	canonical	1	89907	junction_1	100429.50650756001	NA	1	NA	TRUE	NA	NA	NA	B	coding	882	2649	516	3164	15.0	3	True	NA	NA
PB.1103.1	chr1	+	4062	11	full-splice_match	TRAF5	ENST00000336184.6	3972	11	-88	-2	-88	2	multi-exon	FALSE	canonical	1	1934	junction_1	64891.93231743064	NA	1	NA	TRUE	NA	NA	NA	C	coding	557	1674	149	1822	30.0	-3858	False	AGTAAA	-18
PB.11473.4	chr9	-	2036	8	full-splice_match	PLIN2	ENST00000276914.6	1972	8	-60	-4	-60	4	multi-exon	FALSE	canonical	1	436806	junction_4	239160.48830619396	NA	6	NA	TRUE	NA	NA	NA	C	coding	437	1314	241	1554	15.0	-145	False	AATAAA	-20
PB.3018.2	chr12	+	1421	7	full-splice_match	RAN	ENST00000543796.5	2661	7	193	1047	2	-102	multi-exon	FALSE	canonical	1	777424	junction_6	1839906.91494622	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	66	716	45.0	1	True	AATAAA	-20
PB.9563.2	chr5	+	2460	7	novel_not_in_catalog	NDST1	novel	777	2	NA	NA	114	-11128	any annotated donor/acceptor	FALSE	canonical	1	89907	junction_1	137535.79371930784	NA	7	1	TRUE	NA	NA	NA	B	coding	556	1671	480	2150	15.0	0	True	AATAAA	-23
PB.11473.5	chr9	-	2010	8	novel_not_in_catalog	PLIN2	novel	790	3	NA	NA	47	7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	291342.9621859181	NA	0	NA	TRUE	NA	NA	NA	C	coding	457	1374	152	1525	20.0	63	False	AATAAA	-23
PB.7356.4	chr20	-	4475	4	full-splice_match	ADNP	ENST00000396032.8	4979	4	493	11	62	2	multi-exon	FALSE	canonical	1	44801	junction_3	167407.9696815205	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	109	3417	35.0	508	False	AATAAA	-21
PB.9563.3	chr5	+	4115	15	novel_in_catalog	NDST1	novel	777	2	NA	NA	-30	553	combination_of_known_junctions	FALSE	canonical	1	20718	junction_1	115107.15809183888	NA	15	1	TRUE	NA	NA	NA	B	coding	882	2649	532	3180	15.0	-2573	False	NA	NA
PB.7356.1	chr20	-	4693	5	full-splice_match	ADNP	ENST00000396029.8	6396	5	405	1298	20	3	multi-exon	FALSE	canonical	1	68192	junction_4	140029.1441600194	NA	0	NA	TRUE	NA	NA	NA	C	coding	1102	3309	326	3634	35.0	466	False	AATAAA	-22
PB.9287.5	chr5	+	8495	25	full-splice_match	TNPO1	ENST00000337273.9	11183	25	342	2346	5	-2346	multi-exon	FALSE	canonical	1	167413	junction_3	160524.4582500884	NA	3	NA	TRUE	NA	NA	NA	C	coding	898	2697	85	2781	20.0	-7	True	AATAAA	-14
PB.1184.4	chr1	+	2443	8	full-splice_match	RAB4A	ENST00000366690.4	2966	8	130	393	68	-390	multi-exon	FALSE	canonical	1	283502	junction_1	186990.01450301227	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	94	735	30.0	2	True	AATAAA	-16
PB.1184.1	chr1	+	1314	8	full-splice_match	RAB4A	ENST00000366690.4	2966	8	165	1487	103	513	multi-exon	FALSE	canonical	1	283502	junction_1	186990.01450301227	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	44	700	25.0	0	True	AATAAA	-24
PB.1184.3	chr1	+	2038	8	full-splice_match	RAB4A	ENST00000366690.4	2966	8	-8	936	-8	-933	multi-exon	FALSE	canonical	1	283502	junction_1	186990.01450301227	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	217	873	45.0	13	True	AATATA	-25
PB.1184.2	chr1	+	2351	6	full-splice_match	RAB4A	ENST00000618010.4	2799	6	58	390	-12	-390	multi-exon	FALSE	canonical	1	22396	junction_1	367285.7988517389	NA	2	NA	TRUE	NA	NA	NA	C	coding	113	342	302	643	30.0	9	True	AATAAA	-16
PB.7515.1	chr21	-	4603	3	novel_not_in_catalog	CLDN14	novel	1330	3	NA	NA	-24	21048	any annotated donor/acceptor	FALSE	canonical	1	5735	junction_2	521.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	105	318	1420	1737	35.0	22	False	NA	NA
PB.11480.9	chr9	-	3380	1	full-splice_match	KLHL9	ENST00000359039.4	5710	1	-14	2344	-14	-2344	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	608	1827	563	2389	80.0	1	True	AGTAAA	-9
PB.4435.2	chr16	+	3059	13	full-splice_match	MMP2	ENST00000219070.8	3741	13	230	452	230	0	multi-exon	FALSE	canonical	1	1362495	junction_1	231413.8123095484	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	292	2262	10.0	3	True	AATAAA	-18
PB.4435.1	chr16	+	2805	14	novel_not_in_catalog	MMP2	novel	3235	14	NA	NA	198	0	intron_retention	FALSE	non_canonical	0	0	junction_1	538760.6192998913	NA	1	NA	TRUE	NA	NA	NA	C	coding	584	1755	254	2008	10.0	-2	True	AATAAA	-18
PB.1207.1	chr1	+	1790	3	full-splice_match	KCNK1	ENST00000366621.7	2161	3	96	275	96	-1	multi-exon	FALSE	canonical	1	206256	junction_2	51330.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	336	1011	73	1083	35.0	-6	True	AATAAA	-36
PB.1316.2	chr10	-	3447	10	novel_in_catalog	TRDMT1	novel	8230	12	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	4182	junction_8	19478.102237267165	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	242	1147	25.0	-11	True	TATAAA	-27
PB.1316.3	chr10	-	2352	9	novel_in_catalog	TRDMT1	novel	8230	12	NA	NA	0	691	combination_of_known_junctions	FALSE	canonical	1	4277	junction_6	25334.529413616016	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	39	1034	40.0	-1	True	AATAAA	-17
PB.1316.1	chr10	-	3537	11	full-splice_match	TRDMT1	ENST00000377799.7	3527	11	-11	1	-11	-1	multi-exon	FALSE	canonical	1	37918	junction_7	11538.305075269938	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	60	1235	25.0	-22	False	TATAAA	-29
PB.1316.4	chr10	-	2484	11	novel_in_catalog	TRDMT1	novel	8230	12	NA	NA	2	687	combination_of_known_junctions	FALSE	canonical	1	7047	junction_1	18181.57749179097	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	37	1170	40.0	1	True	AATAAA	-13
PB.7871.1	chr22	-	2553	1	full-splice_match	AL118516.1	ENST00000564152.1	670	1	35	-1918	35	1918	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-1	True	NA	NA
PB.8559.3	chr3	+	1649	10	novel_in_catalog	AP2M1	novel	2091	11	NA	NA	9	-1	no_combination_of_known_junctions	FALSE	canonical	1	29899	junction_2	1910427.6209936822	NA	0	NA	TRUE	NA	NA	NA	C	coding	323	972	204	1175	15.0	9	True	AATAAA	-14
PB.2436.8	chr12	+	2768	10	novel_in_catalog	ENO2	novel	547	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	436296	junction_1	352057.6148905106	NA	0	NA	TRUE	NA	NA	NA	C	coding	356	1071	116	1186	20.0	2	True	ATTAAA	-15
PB.2436.9	chr12	+	2213	13	novel_not_in_catalog	ENO2	novel	547	6	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	456280.9729851148	NA	11	2	TRUE	NA	NA	NA	C	coding	175	528	115	642	20.0	3	True	ATTAAA	-14
PB.2511.1	chr12	+	1134	3	full-splice_match	ETFRF1	ENST00000381356.8	1134	3	0	0	0	0	multi-exon	FALSE	canonical	1	240745	junction_1	1835.5	NA	2	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	1	True	AATAAA	-17
PB.11862.6	chr9	+	2904	19	full-splice_match	POMT1	ENST00000341012.11	2912	19	1	7	1	1	multi-exon	FALSE	canonical	1	29715	junction_1	73720.45149945807	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	196	2211	5.0	-25	True	ATTAAA	-17
PB.11862.7	chr9	+	3321	19	novel_in_catalog	POMT1	novel	2821	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	71055	junction_1	74143.8366124743	NA	1	1	TRUE	NA	NA	NA	C	coding	450	1353	1271	2623	15.0	-22	True	ATTAAA	-22
PB.11862.4	chr9	+	3122	20	full-splice_match	POMT1	ENST00000372228.7	3123	20	-6	7	1	1	multi-exon	FALSE	canonical	1	12135	junction_8	86217.66911711845	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2244	186	2429	5.0	-25	True	ATTAAA	-17
PB.1555.8	chr10	-	3138	17	novel_in_catalog	ALDH18A1	novel	3359	18	NA	NA	-7	3	no_combination_of_known_junctions	FALSE	canonical	1	10517	junction_15	219402.9565024047	NA	1	NA	TRUE	NA	NA	NA	B	coding	684	2055	264	2318	20.0	-55	True	AATAAA	-14
PB.9287.7	chr5	+	4429	25	full-splice_match	TNPO1	ENST00000337273.9	11183	25	350	6404	-10	1378	multi-exon	FALSE	canonical	1	167413	junction_3	160524.4582500884	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	77	2773	15.0	1	True	AATAAA	-22
PB.11862.3	chr9	+	2881	21	novel_not_in_catalog	POMT1	novel	2821	18	NA	NA	0	1	any annotated donor/acceptor	FALSE	canonical	1	18554	junction_20	83732.98022934272	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	187	2364	5.0	-26	True	ATTAAA	-17
PB.216.3	chr1	+	2164	7	full-splice_match	PPP1R8	ENST00000311772.9	2344	7	36	144	0	4	multi-exon	FALSE	canonical	1	212378	junction_2	71329.09981771503	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	23	1078	15.0	0	True	ATTAAA	-19
PB.216.2	chr1	+	2634	7	full-splice_match	PPP1R8	ENST00000431586.1	1029	7	-510	-1095	0	-1	multi-exon	FALSE	canonical	1	17280	junction_1	124587.71819975766	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	924	1553	20.0	0	True	ATTAAA	-14
PB.8834.14	chr4	-	1742	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	328	2722	1	-1	multi-exon	FALSE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	48	1484	10.0	10	True	AATAAA	-12
PB.1099.2	chr1	+	5017	8	full-splice_match	SYT14	ENST00000472886.5	2966	8	-91	-1960	-14	0	multi-exon	FALSE	canonical	1	2311	junction_2	7254.810496969496	NA	2	NA	TRUE	NA	NA	NA	C	coding	555	1668	106	1773	75.0	-73	False	AATAAA	-14
PB.8834.10	chr4	-	3249	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	42	1501	0	-175	multi-exon	FALSE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	334	1770	70.0	-1	True	TTTAAA	-20
PB.8834.11	chr4	-	2500	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	297	1995	-18	222	multi-exon	FALSE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	79	1515	45.0	1	True	NA	NA
PB.8834.12	chr4	-	2630	12	full-splice_match	SCARB2	ENST00000264896.7	4792	12	20	2142	20	75	multi-exon	FALSE	canonical	1	765300	junction_9	176669.92987232126	NA	0	NA	TRUE	NA	NA	NA	C	coding	478	1437	356	1792	40.0	0	True	NA	NA
PB.8559.4	chr3	+	2534	10	novel_in_catalog	AP2M1	novel	2091	11	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	1656263.663643594	NA	1	1	TRUE	NA	NA	NA	C	coding	248	747	692	1438	15.0	10	True	AATAAA	-14
PB.4842.1	chr17	-	2947	1	antisense	novelGene_NLK_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	AAGAAA	-16
PB.719.5	chr1	-	3133	5	novel_not_in_catalog	ANP32E	novel	3451	7	NA	NA	-47	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	486706.420392404	NA	4	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-48	False	AATAAA	-16
PB.11625.55	chr9	-	2616	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-9	-156	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	760512.793555699	NA	2	1	TRUE	NA	NA	NA	B	coding	462	1389	231	1619	55.0	-27	True	AATATA	-33
PB.7158.5	chr20	+	2366	3	novel_not_in_catalog	PRNP	novel	2657	2	NA	NA	0	-6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	279658.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	65	826	15.0	3	True	ATTAAA	-16
PB.1021.10	chr1	+	3868	11	novel_not_in_catalog	NEK7	novel	4149	10	NA	NA	2	-37	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	204717.60781476516	NA	1	NA	TRUE	NA	NA	NA	C	coding	302	909	99	1007	80.0	2	True	AAAAAG	-43
PB.11625.58	chr9	-	2676	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	5	-160	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	791174.2604600386	NA	3	1	TRUE	NA	NA	NA	B	coding	463	1392	235	1626	55.0	353	False	AATATA	-29
PB.925.1	chr1	-	1520	2	full-splice_match	METTL18	ENST00000310392.4	1521	2	-4	5	-4	-5	multi-exon	FALSE	canonical	1	91488	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	359	1477	35.0	-64	False	AATAAA	-11
PB.8099.1	chr3	+	1786	15	novel_in_catalog	ARIH2	novel	598	3	NA	NA	1	-14	combination_of_known_junctions	FALSE	canonical	1	3131	junction_1	201098.04373798592	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	185	1450	85.0	-43	True	NA	NA
PB.4429.1	chr16	+	3712	2	full-splice_match	AC007342.4	ENST00000565189.1	721	2	-49	-2942	-49	2942	multi-exon	FALSE	canonical	1	8118	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	50.0	-65	False	NA	NA
PB.9287.6	chr5	+	3202	25	full-splice_match	TNPO1	ENST00000337273.9	11183	25	360	7621	0	161	multi-exon	FALSE	canonical	1	167413	junction_3	160524.4582500884	NA	0	NA	TRUE	NA	NA	NA	C	coding	898	2697	67	2763	25.0	11	True	AATAAA	-31
PB.8099.2	chr3	+	2234	17	full-splice_match	ARIH2	ENST00000449376.5	2278	17	30	14	2	-14	multi-exon	FALSE	canonical	1	51635	junction_3	184855.15406186102	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	417	1898	85.0	1	True	NA	NA
PB.8099.5	chr3	+	2114	16	full-splice_match	ARIH2	ENST00000356401.8	4933	16	43	2776	0	-14	multi-exon	FALSE	canonical	1	108846	junction_2	182391.85146815694	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	297	1778	85.0	-1	True	NA	NA
PB.8099.4	chr3	+	4939	17	novel_in_catalog	ARIH2	novel	598	3	NA	NA	0	-14	intron_retention	FALSE	canonical	1	87343	junction_3	185688.89605726252	NA	3	NA	TRUE	NA	NA	NA	C	coding	351	1056	3548	4603	85.0	-36	True	NA	NA
PB.8099.7	chr3	+	1721	14	novel_in_catalog	ARIH2	novel	598	3	NA	NA	-1	-14	combination_of_known_junctions	FALSE	canonical	1	4340	junction_1	201559.7323843238	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	330	1385	85.0	-24	True	NA	NA
PB.9040.1	chr4	+	2222	10	full-splice_match	GLRB	ENST00000264428.8	3126	10	97	807	-12	378	multi-exon	TRUE	canonical	1	53940	junction_1	18567.279330273326	NA	0	NA	TRUE	NA	NA	NA	A	coding	497	1494	174	1667	35.0	-39	True	AATAAA	-23
PB.8099.9	chr3	+	2071	15	novel_in_catalog	ARIH2	novel	598	3	NA	NA	1	-14	combination_of_known_junctions	FALSE	canonical	1	7200	junction_1	196927.21267322323	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	254	1735	85.0	-22	True	NA	NA
PB.8099.8	chr3	+	2304	18	novel_in_catalog	ARIH2	novel	598	3	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	1	51635	junction_3	187689.19617414923	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	913	1968	85.0	-23	True	NA	NA
PB.925.3	chr1	-	2374	1	novel_in_catalog	METTL18	novel	1521	2	NA	NA	56	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	372	1119	1213	2331	35.0	-1	True	AATAAA	-11
PB.76.1	chr1	+	4169	13	novel_not_in_catalog	TMEM201	novel	3851	6	NA	NA	-190	4	any annotated donor/acceptor	FALSE	canonical	1	1898	junction_10	52157.1320825483	NA	1	NA	TRUE	NA	NA	NA	C	coding	763	2292	200	2491	5.0	-17	True	AAAAAG	-33
PB.11538.19	chr9	+	2725	19	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	5646	junction_1	115998.04197559906	NA	0	NA	TRUE	NA	NA	NA	C	coding	651	1956	426	2381	10.0	-2	True	AATAAA	-16
PB.7158.2	chr20	+	2434	2	full-splice_match	PRNP	ENST00000379440.8	2657	2	221	2	-2	-2	multi-exon	FALSE	canonical	1	559317	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	253	762	67	828	5.0	1	True	ATTAAA	-20
PB.748.4	chr1	-	1973	11	full-splice_match	SELENBP1	ENST00000493560.5	1963	11	-11	1	0	0	multi-exon	FALSE	canonical	1	487755	junction_7	122753.63442749872	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	509	1735	10.0	-3	True	AATAAA	-19
PB.748.1	chr1	-	1723	12	full-splice_match	SELENBP1	ENST00000368868.9	1752	12	28	1	0	-1	multi-exon	FALSE	canonical	1	487755	junction_7	121126.68352978885	NA	0	NA	TRUE	NA	NA	NA	C	coding	472	1419	65	1483	5.0	-3	True	AATAAA	-21
PB.635.38	chr1	-	3554	19	novel_not_in_catalog	CSDE1	novel	4006	19	NA	NA	0	-105	any annotated donor/acceptor	FALSE	canonical	1	16772	junction_11	1536220.9493670892	NA	1	NA	TRUE	NA	NA	NA	C	coding	449	1350	1453	2802	80.0	-1	True	TTTAAA	-8
PB.748.2	chr1	-	2131	10	full-splice_match	SELENBP1	ENST00000470345.5	2128	10	1	-4	0	0	multi-exon	FALSE	canonical	1	487755	junction_7	113139.13699511766	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	667	1893	10.0	-3	True	AATAAA	-19
PB.11539.2	chr9	-	8943	10	novel_not_in_catalog	PAX5	novel	8615	10	NA	NA	6331	-610	any annotated donor/acceptor	FALSE	canonical	1	2648	junction_9	36188.60637149642	NA	3	NA	TRUE	NA	NA	NA	B	coding	283	852	1417	2268	90.0	-7	True	NA	NA
PB.2384.2	chr12	+	2296	13	full-splice_match	CCDC77	ENST00000239830.8	2371	13	68	7	7	0	multi-exon	FALSE	canonical	1	50458	junction_3	38628.82425512499	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	112	1578	30.0	0	True	AATAAA	-12
PB.3912.8	chr15	+	2974	8	full-splice_match	RAB8B	ENST00000321437.8	4943	8	133	1836	-1	-1836	multi-exon	FALSE	canonical	1	319918	junction_3	71382.8144772527	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	24	647	25.0	-4	True	AATAAA	-19
PB.2384.1	chr12	+	2222	12	full-splice_match	CCDC77	ENST00000412006.6	2253	12	27	4	2	0	multi-exon	FALSE	canonical	1	45096	junction_2	36878.27347521026	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	134	1504	30.0	20	True	AATAAA	-12
PB.5218.5	chr17	-	2516	5	full-splice_match	LINC00511	ENST00000648623.1	2410	5	-112	6	0	0	multi-exon	FALSE	canonical	1	8347	junction_2	12686.563371831633	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	ATTAAA	-16
PB.1555.4	chr10	-	3610	17	novel_in_catalog	ALDH18A1	novel	3359	18	NA	NA	-169	-4	intron_retention	FALSE	canonical	1	488288	junction_11	123293.83139774016	NA	0	NA	TRUE	NA	NA	NA	B	coding	829	2490	308	2797	30.0	-12	False	AATAAA	-7
PB.11744.5	chr9	-	5516	22	full-splice_match	AKNA	ENST00000374088.7	5464	22	-92	40	26	-2	multi-exon	FALSE	canonical	1	111053	junction_21	91605.10894698072	NA	0	NA	TRUE	NA	NA	NA	C	coding	1439	4320	310	4629	70.0	9915	False	AATGAA	-16
PB.8801.4	chr4	-	3875	3	incomplete-splice_match	EPHA5	ENST00000511294.1	5176	17	2	268866	2	-268866	3prime_fragment	FALSE	canonical	1	14990	junction_2	4283.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	354	1065	752	1816	30.0	-5	True	AATAAA	-40
PB.8801.5	chr4	-	3252	3	incomplete-splice_match	EPHA5	ENST00000511294.1	5176	17	2	269489	2	-269489	3prime_fragment	FALSE	canonical	1	14990	junction_2	4283.0	NA	1	1	TRUE	NA	NA	NA	C	coding	354	1065	752	1816	10.0	-5	True	TATAAA	-13
PB.8801.2	chr4	-	4005	4	novel_not_in_catalog	EPHA5	novel	8266	18	NA	NA	6	-267054	any annotated donor/acceptor	FALSE	canonical	1	434	junction_1	9544.51777490909	NA	2	NA	TRUE	NA	NA	NA	C	coding	317	954	748	1701	20.0	-1	True	AATAAA	-16
PB.8801.3	chr4	-	5683	3	incomplete-splice_match	EPHA5	ENST00000511294.1	5176	17	4	267056	4	-267056	3prime_fragment	FALSE	canonical	1	14990	junction_2	4283.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	750	1814	25.0	-3	True	AATAAA	-14
PB.11744.3	chr9	-	5574	24	novel_not_in_catalog	AKNA	novel	7380	22	NA	NA	-3568	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_23	122419.86621731542	NA	3	1	TRUE	NA	NA	NA	C	coding	1439	4320	366	4685	80.0	-3	True	AATGAA	-18
PB.8801.1	chr4	-	8381	17	full-splice_match	EPHA5	ENST00000613740.4	8355	17	-27	1	-27	-1	multi-exon	FALSE	canonical	1	10637	junction_13	5357.838741915904	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	781	3831	20.0	238	False	AATAAA	-19
PB.8000.1	chr3	+	2915	15	incomplete-splice_match	CNOT10	ENST00000328834.9	2815	19	28	10225	28	-1654	3prime_fragment	FALSE	canonical	1	230613	junction_7	42103.0635750911	NA	3	NA	TRUE	NA	NA	NA	C	coding	614	1845	289	2133	80.0	5	True	NA	NA
PB.9317.1	chr5	+	4516	2	incomplete-splice_match	THBS4	ENST00000513310.5	573	5	0	53161	0	-53161	3prime_fragment	FALSE	canonical	1	19372	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	90.0	-21	False	NA	NA
PB.864.5	chr1	-	2203	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-9	-984	intron_retention	FALSE	non_canonical	0	0	junction_1	349738.2750222737	NA	5	1	TRUE	NA	NA	NA	B	coding	276	831	80	910	30.0	-10	True	AATAAA	-18
PB.8559.7	chr3	+	1886	11	full-splice_match	AP2M1	ENST00000382456.7	2091	11	210	-5	-6	5	multi-exon	FALSE	canonical	1	1289854	junction_4	1252533.2978784395	NA	1	NA	TRUE	NA	NA	NA	C	coding	433	1302	105	1406	10.0	44	True	AATAAA	-20
PB.864.6	chr1	-	2149	10	novel_not_in_catalog	F11R	novel	4770	11	NA	NA	-17617	-984	intron_retention	FALSE	non_canonical	0	0	junction_1	399353.54798863514	NA	2	1	TRUE	NA	NA	NA	B	coding	258	777	77	853	30.0	-13	True	AATAAA	-18
PB.6931.1	chr2	+	2672	2	full-splice_match	C2orf69	ENST00000319974.5	3728	2	91	965	41	-965	multi-exon	FALSE	canonical	1	99015	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	93	1250	100.0	-104	False	AATGAA	-33
PB.6931.2	chr2	+	2064	2	full-splice_match	C2orf69	ENST00000319974.5	3728	2	37	1627	-13	-1627	multi-exon	FALSE	canonical	1	99015	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	147	1304	80.0	0	True	NA	NA
PB.6931.3	chr2	+	3679	2	full-splice_match	C2orf69	ENST00000319974.5	3728	2	47	2	-3	-2	multi-exon	FALSE	canonical	1	99015	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	137	1294	15.0	10	True	ATTAAA	-16
PB.6931.4	chr2	+	2384	2	full-splice_match	C2orf69	ENST00000319974.5	3728	2	51	1293	1	-1293	multi-exon	FALSE	canonical	1	99015	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	385	1158	133	1290	45.0	14	True	NA	NA
PB.8000.5	chr3	+	2549	18	full-splice_match	CNOT10	ENST00000331889.10	2573	18	185	-161	11	0	multi-exon	FALSE	canonical	1	27001	junction_12	82667.04873172769	NA	1	NA	TRUE	NA	NA	NA	C	coding	717	2154	132	2285	20.0	8	True	ATTAAA	-18
PB.7545.2	chr21	+	5071	15	novel_not_in_catalog	RRP1B	novel	5090	16	NA	NA	7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	104577.90464131688	NA	6	1	TRUE	NA	NA	NA	B	coding	332	999	111	1109	20.0	-9	True	ATTAAA	-21
PB.3651.2	chr14	+	3527	3	novel_not_in_catalog	AL133467.2	novel	1714	4	NA	NA	23	1947	any annotated donor/acceptor	FALSE	canonical	1	330	junction_1	2747.5	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-1	True	NA	NA
PB.3651.3	chr14	+	3509	6	novel_in_catalog	AL133467.2	novel	1714	4	NA	NA	24	26071	no_combination_of_known_junctions	FALSE	canonical	1	1460	junction_1	5399.476182001362	NA	0	NA	TRUE	NA	NA	NA	B	coding	141	426	2225	2650	80.0	0	True	NA	NA
PB.3651.1	chr14	+	3458	3	novel_in_catalog	AL133467.2	novel	1714	4	NA	NA	20	1960	no_combination_of_known_junctions	FALSE	canonical	1	527	junction_1	2649.0	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-4	True	NA	NA
PB.11075.2	chr8	-	1801	13	full-splice_match	GSR	ENST00000221130.10	3192	13	8	1383	8	76	multi-exon	FALSE	canonical	1	472871	junction_12	151727.16242566146	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	157	1725	15.0	-41	False	AATGAA	-23
PB.11075.1	chr8	-	2914	13	full-splice_match	GSR	ENST00000221130.10	3192	13	272	6	-26	-6	multi-exon	FALSE	canonical	1	472871	junction_12	151727.16242566146	NA	4	NA	TRUE	NA	NA	NA	C	coding	479	1440	22	1461	35.0	-1	True	AATAAA	-20
PB.10322.2	chr6	-	3863	1	intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	80.0	-25	False	AAGAAA	-28
PB.10322.1	chr6	-	2421	3	intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	101	junction_1	185.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	5	True	AATAAA	-29
PB.713.1	chr1	-	1524	6	full-splice_match	SF3B4	ENST00000271628.8	2085	6	560	1	-193	-1	multi-exon	FALSE	canonical	1	240907	junction_3	216222.2543082927	NA	0	NA	TRUE	NA	NA	NA	C	coding	424	1275	26	1300	10.0	18	True	AATAAA	-17
PB.897.2	chr1	-	1711	7	full-splice_match	TMCO1	ENST00000392129.10	1946	7	16	219	2	-219	multi-exon	FALSE	canonical	1	1301367	junction_4	116281.40713038444	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	136	702	40.0	-19	True	AATAAA	-15
PB.6289.2	chr2	+	2467	12	full-splice_match	TRAPPC12	ENST00000382110.6	2483	12	19	-3	8	-1	multi-exon	FALSE	canonical	1	8901	junction_1	153074.19700219817	NA	0	NA	TRUE	NA	NA	NA	C	coding	735	2208	151	2358	0.0	-28	True	AATAAA	-18
PB.8593.1	chr3	+	3097	3	novel_not_in_catalog	TPRG1	novel	2296	11	NA	NA	-1647	-1824	any annotated donor/acceptor	TRUE	canonical	1	20361	junction_1	15990.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	116	351	87	437	25.0	-29	True	ATTAAA	-15
PB.6909.8	chr2	+	4931	4	full-splice_match	GLS	ENST00000409626.5	997	4	-1654	-2280	-1654	-1	multi-exon	FALSE	canonical	1	608997	junction_3	213110.23626491736	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	1996	2505	10.0	-7674	False	AATAAA	-15
PB.294.4	chr1	+	2652	6	full-splice_match	ZC3H12A	ENST00000373087.6	2684	6	28	4	0	-4	multi-exon	FALSE	canonical	1	69795	junction_1	68664.05903119914	NA	0	NA	TRUE	NA	NA	NA	C	coding	599	1800	89	1888	20.0	0	True	AATAAA	-24
PB.897.1	chr1	-	1926	7	full-splice_match	TMCO1	ENST00000392129.10	1946	7	16	4	2	-4	multi-exon	FALSE	canonical	1	1301367	junction_4	116281.40713038444	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	136	702	50.0	-19	True	NA	NA
PB.5980.1	chr19	-	1891	15	full-splice_match	SIRT2	ENST00000392081.6	2062	15	147	24	-1	-24	multi-exon	FALSE	canonical	1	470403	junction_14	151648.83107255877	NA	0	NA	TRUE	NA	NA	NA	C	coding	352	1059	259	1317	75.0	0	True	NA	NA
PB.5980.3	chr19	-	1848	16	full-splice_match	SIRT2	ENST00000249396.11	2070	16	198	24	20	-24	multi-exon	FALSE	canonical	1	75833	junction_15	263834.4088402589	NA	0	NA	TRUE	NA	NA	NA	C	coding	389	1170	105	1274	75.0	-43	True	NA	NA
PB.5980.2	chr19	-	1859	15	novel_in_catalog	SIRT2	novel	1912	13	NA	NA	2	-24	intron_retention	FALSE	canonical	1	15224	junction_14	233297.60575943923	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	227	1285	75.0	3	True	NA	NA
PB.543.13	chr1	-	2447	1	genic	TMED5	novel	NA	NA	NA	NA	-419	-22661	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-3	True	NA	NA
PB.11000.2	chr8	-	2364	14	full-splice_match	ASAH1	ENST00000381733.9	2512	14	162	-14	8	-10	multi-exon	FALSE	canonical	1	43020	junction_13	460833.2776694945	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	36	1271	20.0	-8	True	AATAAA	-28
PB.8281.12	chr3	-	3642	19	novel_in_catalog	CBLB	novel	6749	19	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	65035	junction_18	42127.74459407165	NA	0	NA	TRUE	NA	NA	NA	C	coding	982	2949	129	3077	70.0	-14	True	NA	NA
PB.11000.3	chr8	-	2240	13	full-splice_match	ASAH1	ENST00000636997.1	1774	13	0	-466	0	-6	multi-exon	FALSE	canonical	1	1362	junction_10	484172.2391639946	NA	0	NA	TRUE	NA	NA	NA	C	coding	366	1101	43	1143	15.0	6	True	AATAAA	-32
PB.2591.2	chr12	+	1876	3	incomplete-splice_match	DNAJC22	ENST00000647553.1	3239	4	-37	1814	-37	196	3prime_fragment	FALSE	canonical	1	49624	junction_2	9057.0	NA	4	NA	TRUE	NA	NA	NA	B	coding	341	1026	243	1268	70.0	0	True	TATAAA	-43
PB.2591.1	chr12	+	1926	4	novel_not_in_catalog	DNAJC22	novel	4412	4	NA	NA	-48	196	any annotated donor/acceptor	FALSE	canonical	1	4283	junction_2	28555.65123676145	NA	1	NA	TRUE	NA	NA	NA	B	coding	285	858	254	1111	70.0	-11	True	TATAAA	-43
PB.6528.10	chr2	+	4199	14	novel_not_in_catalog	GMCL1	novel	4191	14	NA	NA	-21	-30	any annotated donor/acceptor	FALSE	canonical	1	4764	junction_4	33951.51178044234	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	836	1837	45.0	5	True	AATAAA	-19
PB.10318.12	chr6	+	5257	27	novel_not_in_catalog	MAP3K4	novel	5397	26	NA	NA	-327	-6	any annotated donor/acceptor	TRUE	canonical	1	465	junction_1	73952.07727581616	NA	1	NA	TRUE	NA	NA	NA	C	coding	1513	4542	210	4751	30.0	-2	True	AATAAA	-14
PB.6528.11	chr2	+	3892	14	full-splice_match	GMCL1	ENST00000282570.3	4191	14	25	274	-19	-274	multi-exon	FALSE	canonical	1	13792	junction_8	30900.36685234445	NA	2	NA	TRUE	NA	NA	NA	C	coding	515	1548	227	1774	20.0	7	True	NA	NA
PB.3844.6	chr15	+	1789	2	incomplete-splice_match	BLOC1S6	ENST00000569076.5	557	5	-10	7001	-9	-77	3prime_fragment	FALSE	canonical	1	18268	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	460	1380	410	1789	60.0	-2	True	NA	NA
PB.3844.7	chr15	+	3723	4	full-splice_match	BLOC1S6	ENST00000568597.5	592	4	-24	-3107	0	3	multi-exon	FALSE	canonical	1	25058	junction_2	244252.18558831088	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	7	True	AATAAA	-21
PB.3844.4	chr15	+	1639	3	full-splice_match	BLOC1S6	ENST00000567740.5	1051	3	139	-727	0	0	multi-exon	FALSE	canonical	1	39489	junction_1	283239.0	NA	1	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	8	True	NA	NA
PB.3844.5	chr15	+	3473	3	full-splice_match	BLOC1S6	ENST00000567740.5	1051	3	169	-2591	4	-73	multi-exon	FALSE	canonical	1	39489	junction_1	283239.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	4	True	TATAAA	-23
PB.3844.2	chr15	+	1841	5	full-splice_match	BLOC1S6	ENST00000220531.7	4037	5	258	1938	2	0	multi-exon	FALSE	canonical	1	132740	junction_3	189348.06336133333	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	64	582	85.0	2	True	NA	NA
PB.3844.3	chr15	+	3646	4	full-splice_match	BLOC1S6	ENST00000567461.5	1052	4	140	-2734	0	4	multi-exon	FALSE	canonical	1	39761	junction_1	247919.8173258622	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	-3	True	AATAAA	-22
PB.3844.1	chr15	+	3760	5	full-splice_match	BLOC1S6	ENST00000220531.7	4037	5	281	-4	-20	4	multi-exon	FALSE	canonical	1	132740	junction_3	189348.06336133333	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	41	559	30.0	-1	True	AATAAA	-22
PB.9955.10	chr6	+	4938	8	full-splice_match	KCTD20	ENST00000373731.6	5619	8	203	478	-37	288	multi-exon	FALSE	canonical	1	212416	junction_1	71029.92897766003	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	189	1448	70.0	3	True	NA	NA
PB.3844.8	chr15	+	3415	5	full-splice_match	BLOC1S6	ENST00000220531.7	4037	5	233	389	1	-388	multi-exon	FALSE	canonical	1	132740	junction_3	189348.06336133333	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	89	607	80.0	11	True	NA	NA
PB.3844.9	chr15	+	1774	4	full-splice_match	BLOC1S6	ENST00000568597.5	592	4	-16	-1166	5	0	multi-exon	FALSE	canonical	1	25058	junction_2	244252.18558831088	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	15	True	NA	NA
PB.549.2	chr1	-	2718	7	full-splice_match	DNTTIP2	ENST00000436063.6	5897	7	3	3176	3	321	multi-exon	FALSE	canonical	1	555455	junction_6	116641.66109987842	NA	1	NA	TRUE	NA	NA	NA	C	coding	756	2271	56	2326	15.0	2	True	TATAAA	-21
PB.549.3	chr1	-	2587	7	full-splice_match	DNTTIP2	ENST00000436063.6	5897	7	30	3280	-12	217	multi-exon	FALSE	canonical	1	555455	junction_6	116641.66109987842	NA	0	NA	TRUE	NA	NA	NA	C	coding	756	2271	29	2299	65.0	-3	True	NA	NA
PB.549.1	chr1	-	3652	7	full-splice_match	DNTTIP2	ENST00000436063.6	5897	7	1	2244	1	1253	multi-exon	FALSE	canonical	1	555455	junction_6	116641.66109987842	NA	4	NA	TRUE	NA	NA	NA	C	coding	756	2271	58	2328	35.0	0	True	NA	NA
PB.10404.1	chr7	+	1877	1	incomplete-splice_match	GLCCI1	ENST00000223145.9	4743	8	118407	3	2562	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-17
PB.549.7	chr1	-	2019	7	novel_in_catalog	DNTTIP2	novel	5897	7	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	1	5962	junction_6	317850.7664018167	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	301	1956	50.0	-1	True	ATTAAA	-10
PB.549.4	chr1	-	4805	6	novel_in_catalog	DNTTIP2	novel	5897	7	NA	NA	20	-5	intron_retention	FALSE	canonical	1	555455	junction_5	127508.37793964756	NA	2	NA	TRUE	NA	NA	NA	C	coding	604	1815	39	1853	45.0	-13	True	ATTAAA	-13
PB.8119.1	chr3	-	3279	16	novel_in_catalog	MST1	novel	667	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	18799	junction_10	77628.05653387612	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	2363	3199	20.0	-31	False	CATAAA	-25
PB.11061.1	chr8	+	6219	8	novel_not_in_catalog	EXTL3	novel	548	5	NA	NA	14	2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	105711.03823255205	NA	1	1	TRUE	NA	NA	NA	C	coding	919	2760	637	3396	10.0	-13	True	AATAAA	-26
PB.549.8	chr1	-	2065	5	incomplete-splice_match	DNTTIP2	ENST00000436063.6	5897	7	21	5828	21	-2313	3prime_fragment	FALSE	canonical	1	555455	junction_4	133868.20201297806	NA	0	NA	TRUE	NA	NA	NA	C	coding	676	2028	38	2065	55.0	-12	True	NA	NA
PB.549.9	chr1	-	1937	4	incomplete-splice_match	DNTTIP2	ENST00000436063.6	5897	7	23	6836	-19	2547	3prime_fragment	FALSE	canonical	1	555455	junction_3	142518.55983071896	NA	0	NA	TRUE	NA	NA	NA	C	coding	634	1902	36	1937	35.0	-10	True	NA	NA
PB.11061.5	chr8	+	6164	6	novel_in_catalog	EXTL3	novel	548	5	NA	NA	-55	-2	no_combination_of_known_junctions	FALSE	canonical	1	6021	junction_1	107269.42750849377	NA	0	NA	TRUE	NA	NA	NA	C	coding	919	2760	586	3345	20.0	-3	True	AATAAA	-22
PB.8119.2	chr3	-	3230	16	novel_in_catalog	MST1	novel	667	5	NA	NA	0	-1	intron_retention	FALSE	canonical	1	18799	junction_10	80371.04853935623	NA	2	1	TRUE	NA	NA	NA	C	coding	339	1020	803	1822	20.0	-31	False	CATAAA	-25
PB.11032.21	chr8	-	1599	10	full-splice_match	TNFRSF10B	ENST00000347739.3	1723	10	-8	132	2	31	multi-exon	FALSE	canonical	1	274127	junction_5	155011.8542055636	NA	0	NA	TRUE	NA	NA	NA	C	coding	411	1236	136	1371	10.0	1	True	NA	NA
PB.6561.1	chr2	+	1991	8	full-splice_match	MTHFD2	ENST00000394053.6	4456	8	-39	2504	-39	-216	multi-exon	FALSE	canonical	1	488657	junction_1	93476.78172527274	NA	0	NA	TRUE	NA	NA	NA	A	coding	344	1035	138	1172	45.0	-7873	False	NA	NA
PB.8119.3	chr3	-	3177	17	novel_in_catalog	MST1	novel	667	5	NA	NA	3	-1	intron_retention	FALSE	canonical	1	18799	junction_11	75885.98126916192	NA	1	NA	TRUE	NA	NA	NA	C	coding	362	1089	2009	3097	20.0	-28	False	CATAAA	-25
PB.11000.8	chr8	-	2360	14	full-splice_match	ASAH1	ENST00000635944.1	1960	14	-13	-387	0	4	multi-exon	FALSE	canonical	1	5616	junction_13	468694.16201290826	NA	0	NA	TRUE	NA	NA	NA	C	coding	373	1122	153	1274	25.0	26	True	AATAAA	-21
PB.9305.10	chr5	-	2234	13	novel_in_catalog	WDR41	novel	376	3	NA	NA	-2	-24	combination_of_known_junctions	FALSE	canonical	1	1001	junction_8	129791.70491599222	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	6	1367	70.0	3	True	NA	NA
PB.8853.69	chr4	-	3320	23	incomplete-splice_match	SEC31A	ENST00000348405.8	4012	25	-75	5996	3	-59	3prime_fragment	FALSE	canonical	1	315490	junction_11	271288.81581848953	NA	0	NA	TRUE	NA	NA	NA	C	coding	1064	3192	129	3320	70.0	9357	False	NA	NA
PB.11296.2	chr8	-	3271	7	novel_in_catalog	ANGPT1	novel	4322	9	NA	NA	-41	-184	combination_of_known_junctions	FALSE	canonical	1	1283	junction_4	43272.347045261544	NA	3	1	TRUE	NA	NA	NA	C	coding	182	549	545	1093	25.0	NA	False	AATGAA	-44
PB.8858.2	chr4	-	3487	7	novel_not_in_catalog	COQ2	novel	1304	7	NA	NA	12	0	any annotated donor/acceptor	FALSE	canonical	1	1523	junction_6	94948.20041957965	NA	1	NA	TRUE	NA	NA	NA	C	coding	261	786	2329	3114	15.0	11	True	AATAAA	-13
PB.11545.2	chr9	-	4656	2	full-splice_match	ZBTB5	ENST00000307750.4	4627	2	-50	21	-50	-21	multi-exon	FALSE	canonical	1	95591	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	677	2034	240	2273	55.0	-40	True	NA	NA
PB.3759.10	chr15	-	4632	35	full-splice_match	AQR	ENST00000156471.9	9694	35	123	4939	17	106	multi-exon	FALSE	canonical	1	149345	junction_31	64414.170692379674	NA	0	NA	TRUE	NA	NA	NA	C	coding	1485	4458	104	4561	15.0	-20	True	AGTAAA	-19
PB.2926.4	chr12	+	2318	13	novel_not_in_catalog	PLBD2	novel	2321	11	NA	NA	-7	-58	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	119090.43079837714	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	43	1812	20.0	-31	True	NA	NA
PB.2926.5	chr12	+	2574	12	full-splice_match	PLBD2	ENST00000280800.4	4800	12	-1	2227	-1	160	multi-exon	FALSE	canonical	1	202567	junction_1	72187.46842552349	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	33	1802	5.0	-21	True	ATTAAA	-17
PB.2926.6	chr12	+	3627	13	novel_not_in_catalog	PLBD2	novel	2321	11	NA	NA	20	-59	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_12	119090.43079837714	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1770	12	1781	20.0	0	True	NA	NA
PB.2926.7	chr12	+	2158	10	incomplete-splice_match	PLBD2	ENST00000280800.4	4800	12	14077	2229	-2219	158	5prime_fragment	FALSE	canonical	1	300608	junction_1	53576.62202265112	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	12	1388	5.0	NA	False	ATTAAA	-15
PB.2926.1	chr12	+	4556	12	full-splice_match	PLBD2	ENST00000280800.4	4800	12	185	59	1	-59	multi-exon	FALSE	canonical	1	202567	junction_1	72187.46842552349	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	69	1616	20.0	-2604	False	NA	NA
PB.2926.2	chr12	+	4411	9	novel_in_catalog	PLBD2	novel	2321	11	NA	NA	-20	-59	no_combination_of_known_junctions	FALSE	canonical	1	962	junction_1	133970.11257716216	NA	1	NA	TRUE	NA	NA	NA	C	coding	471	1416	56	1471	20.0	-44	True	NA	NA
PB.2926.3	chr12	+	4637	11	full-splice_match	PLBD2	ENST00000545182.6	2321	11	-14	-2302	-14	-85	multi-exon	FALSE	canonical	1	9853	junction_7	123023.60684827933	NA	29	1	TRUE	NA	NA	NA	C	coding	557	1674	50	1723	70.0	-38	True	NA	NA
PB.6539.1	chr2	+	3052	3	novel_not_in_catalog	VAX2	novel	1147	3	NA	NA	-35	-3760	any annotated donor/acceptor	FALSE	canonical	1	1033	junction_2	8236.5	NA	1	NA	TRUE	NA	NA	NA	B	coding	163	492	68	559	75.0	-6795	False	NA	NA
PB.10878.29	chr7	+	2276	10	full-splice_match	LUC7L2	ENST00000354926.8	2645	10	32	337	28	-36	multi-exon	FALSE	canonical	1	372878	junction_1	291120.3321271162	NA	1	NA	TRUE	NA	NA	NA	C	coding	392	1179	323	1501	80.0	-16	True	TATAAA	-18
PB.4554.1	chr16	-	3185	7	full-splice_match	BCAR1	ENST00000542031.6	2846	7	74	-413	74	-3	multi-exon	TRUE	canonical	1	2005	junction_6	246594.39174803498	NA	0	NA	TRUE	NA	NA	NA	C	coding	868	2607	108	2714	30.0	3711	False	AATAAA	-10
PB.1597.2	chr10	-	2125	15	novel_not_in_catalog	CWF19L1	novel	2402	13	NA	NA	-2	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	78930.35135665946	NA	1	NA	TRUE	NA	NA	NA	C	coding	538	1617	83	1699	20.0	4	True	AATGAA	-23
PB.6289.3	chr2	+	2410	11	novel_in_catalog	TRAPPC12	novel	2483	12	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	345	junction_9	158842.43815369369	NA	0	NA	TRUE	NA	NA	NA	C	coding	617	1854	188	2041	5.0	-28	True	AATAAA	-12
PB.11545.4	chr9	-	3112	3	novel_not_in_catalog	ZBTB5	novel	4627	2	NA	NA	-28	8	any annotated donor/acceptor	FALSE	canonical	1	2903	junction_1	46344.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	677	2034	218	2251	20.0	-18	True	AATAAA	-23
PB.2270.1	chr11	+	1679	3	full-splice_match	AP000924.1	ENST00000526605.5	720	3	253	-1212	184	1212	multi-exon	FALSE	canonical	1	7999	junction_2	2166.5	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	0	True	NA	NA
PB.4554.2	chr16	-	3235	7	full-splice_match	BCAR1	ENST00000538440.6	3192	7	17	-60	17	-6	multi-exon	FALSE	canonical	1	89915	junction_6	218808.9131802882	NA	0	NA	TRUE	NA	NA	NA	C	coding	870	2613	155	2767	40.0	16	True	AATAAA	-7
PB.555.1	chr1	+	4642	7	full-splice_match	TMEM56	ENST00000370203.8	6822	7	-27	2207	-27	-2207	multi-exon	FALSE	canonical	1	39536	junction_1	38814.695763617965	NA	3	NA	TRUE	NA	NA	NA	C	coding	263	792	319	1110	5.0	-375	False	AATAAA	-43
PB.9638.6	chr5	-	1776	14	novel_in_catalog	UIMC1	novel	2570	15	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	1	31936	junction_9	118863.03136575149	NA	0	NA	TRUE	NA	NA	NA	C	coding	286	861	689	1549	30.0	11	True	NA	NA
PB.555.3	chr1	+	6836	7	full-splice_match	TMEM56	ENST00000370203.8	6822	7	-18	4	-18	-4	multi-exon	FALSE	canonical	1	39536	junction_1	38814.695763617965	NA	6	NA	TRUE	NA	NA	NA	C	coding	263	792	310	1101	30.0	-366	False	AATAAA	-19
PB.555.2	chr1	+	4189	7	full-splice_match	TMEM56	ENST00000370203.8	6822	7	-20	2653	-20	-2653	multi-exon	FALSE	canonical	1	39536	junction_1	38814.695763617965	NA	3	NA	TRUE	NA	NA	NA	C	coding	263	792	312	1103	25.0	-368	False	ATTAAA	-18
PB.3218.3	chr13	-	4974	8	full-splice_match	DCT	ENST00000377028.9	5064	8	86	4	86	-4	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	3	NA	TRUE	NA	NA	NA	C	coding	519	1560	329	1888	30.0	-1	True	TATAAA	-45
PB.3218.2	chr13	-	5962	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-13	-885	0	885	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	428	1987	30.0	-1	True	ATTAAA	-19
PB.3218.1	chr13	-	6663	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-12	-1587	1	1587	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	2	NA	TRUE	NA	NA	NA	C	coding	519	1560	427	1986	40.0	0	True	GATAAA	-11
PB.6959.1	chr2	+	2596	11	novel_not_in_catalog	NBEAL1	novel	2372	11	NA	NA	-4	-1124	any annotated donor/acceptor	FALSE	canonical	1	2162	junction_10	16573.850382153207	NA	0	NA	TRUE	NA	NA	NA	B	coding	372	1119	338	1456	25.0	-4	True	AATAAA	-23
PB.3218.7	chr13	-	4165	10	novel_in_catalog	DCT	novel	5064	8	NA	NA	549	-497	combination_of_known_junctions	FALSE	canonical	1	1567	junction_3	114256.2796368079	NA	4	NA	TRUE	NA	NA	NA	C	coding	112	339	799	1137	15.0	-1	True	AATAAA	-17
PB.9152.2	chr5	+	2960	7	full-splice_match	OTULIN	ENST00000284274.4	7800	7	-28	4868	-12	1443	multi-exon	FALSE	canonical	1	96239	junction_1	49472.74484810354	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	122	1165	15.0	2	True	ATTAAA	-17
PB.3218.5	chr13	-	4703	8	full-splice_match	DCT	ENST00000377028.9	5064	8	-13	374	0	-374	multi-exon	FALSE	canonical	1	137731	junction_6	43535.715047462785	NA	2	NA	TRUE	NA	NA	NA	C	coding	519	1560	428	1987	50.0	-1	True	NA	NA
PB.3218.4	chr13	-	5146	9	novel_in_catalog	DCT	novel	5064	8	NA	NA	0	-4	no_combination_of_known_junctions	FALSE	canonical	1	8119	junction_2	105381.98686652999	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	428	1699	30.0	-1	True	TATAAA	-45
PB.11284.24	chr8	-	4195	13	novel_not_in_catalog	AZIN1	novel	4721	12	NA	NA	30	-48	any annotated donor/acceptor	FALSE	canonical	1	2398	junction_4	532556.6396446328	NA	0	NA	TRUE	NA	NA	NA	C	coding	480	1443	591	2033	20.0	-1	True	AGTAAA	-15
PB.12173.1	chrX	+	3455	11	full-splice_match	KLHL4	ENST00000373119.8	5818	11	245	2118	180	-1664	multi-exon	FALSE	canonical	1	30784	junction_9	6451.741626103761	NA	5	NA	TRUE	NA	NA	NA	A	coding	590	1773	285	2057	30.0	-3	True	AATAAA	-15
PB.1692.1	chr10	+	3206	2	novel_in_catalog	AC073585.1	novel	1650	6	NA	NA	11	-8526	intron_retention	FALSE	canonical	1	8436	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	A	coding	116	351	2037	2387	40.0	-25	False	AATAAA	-22
PB.3218.8	chr13	-	4290	7	novel_in_catalog	DCT	novel	5064	8	NA	NA	97	-497	no_combination_of_known_junctions	FALSE	canonical	1	8531	junction_3	91073.43258678069	NA	1	NA	TRUE	NA	NA	NA	C	coding	459	1380	318	1697	15.0	10	True	AATAAA	-17
PB.6905.8	chr2	+	3105	7	novel_in_catalog	MFSD6	novel	517	4	NA	NA	0	-1368	combination_of_known_junctions	FALSE	canonical	1	35200	junction_1	74319.8387745306	NA	3	NA	TRUE	NA	NA	NA	C	coding	791	2376	203	2578	65.0	0	True	GATAAA	-22
PB.12252.8	chrX	-	4299	29	novel_in_catalog	THOC2	novel	5609	39	NA	NA	4	755	intron_retention	FALSE	canonical	1	228109	junction_27	78162.91301247454	NA	5	1	TRUE	NA	NA	NA	B	coding	1168	3507	12	3518	25.0	12	True	NA	NA
PB.12252.9	chrX	-	3756	29	novel_in_catalog	THOC2	novel	5609	39	NA	NA	2	755	no_combination_of_known_junctions	FALSE	canonical	1	141	junction_28	97311.68864005798	NA	1	NA	TRUE	NA	NA	NA	B	coding	1182	3546	209	3754	25.0	-7	True	NA	NA
PB.12303.33	chrX	-	3306	9	novel_in_catalog	IDS	novel	7619	9	NA	NA	9	4600	intron_retention	FALSE	canonical	1	89648	junction_6	352978.21386560105	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	2072	3091	10.0	-33	True	ATTAAA	-26
PB.12303.32	chrX	-	2048	9	full-splice_match	IDS	ENST00000340855.10	7619	9	24	5547	24	4594	multi-exon	FALSE	canonical	1	479379	junction_7	217153.15616216013	NA	0	NA	TRUE	NA	NA	NA	C	coding	550	1653	187	1839	20.0	-18	True	ATTAAA	-20
PB.12303.35	chrX	-	2175	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	0	4594	combination_of_known_junctions	FALSE	canonical	1	56236	junction_7	416552.350987318	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	947	1966	20.0	-42	False	ATTAAA	-20
PB.12303.34	chrX	-	2180	10	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	4594	no_combination_of_known_junctions	FALSE	canonical	1	5846	junction_7	426264.5849588009	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	952	1971	20.0	-1	True	ATTAAA	-20
PB.12303.36	chrX	-	4298	8	novel_in_catalog	IDS	novel	7619	9	NA	NA	-26	4587	intron_retention	FALSE	canonical	1	479379	junction_6	217144.59141046164	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	3077	4096	20.0	-1	True	ATTAAA	-13
PB.12252.1	chrX	-	3922	18	novel_not_in_catalog	THOC2	novel	1365	9	NA	NA	-1333	95	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	195846.14169967844	NA	2	NA	TRUE	NA	NA	NA	B	coding	469	1410	83	1492	60.0	-4805	False	NA	NA
PB.12252.2	chrX	-	4441	34	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	-2	3898	-2	-566	3prime_fragment	FALSE	canonical	1	228109	junction_32	103392.1105679408	NA	1	NA	TRUE	NA	NA	NA	B	coding	1468	4404	37	4440	70.0	-13	True	AAGAAA	-32
PB.12252.3	chrX	-	4084	31	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	2	11123	0	154	3prime_fragment	FALSE	canonical	1	228109	junction_29	77647.27073148733	NA	0	NA	TRUE	NA	NA	NA	B	coding	1350	4050	33	4082	55.0	-9	True	AAAAAG	-44
PB.12252.4	chrX	-	4025	31	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	2	11182	0	95	3prime_fragment	FALSE	canonical	1	228109	junction_29	77647.27073148733	NA	1	NA	TRUE	NA	NA	NA	B	coding	1331	3993	33	4025	65.0	-9	True	AAGAAA	-6
PB.12252.5	chrX	-	4056	32	novel_in_catalog	THOC2	novel	5609	39	NA	NA	0	77	combination_of_known_junctions	FALSE	canonical	1	63147	junction_3	103774.79000262776	NA	0	NA	TRUE	NA	NA	NA	B	coding	1347	4041	16	4056	70.0	8	True	AAAAAG	-36
PB.12252.6	chrX	-	3919	32	novel_in_catalog	THOC2	novel	5609	39	NA	NA	-1	-32	combination_of_known_junctions	FALSE	canonical	1	63147	junction_3	103774.79000262776	NA	0	NA	TRUE	NA	NA	NA	B	coding	1294	3882	36	3917	65.0	-12	True	NA	NA
PB.12252.7	chrX	-	3836	31	incomplete-splice_match	THOC2	ENST00000355725.8	4930	39	8	11365	6	-40	3prime_fragment	FALSE	canonical	1	228109	junction_29	77647.27073148733	NA	0	NA	TRUE	NA	NA	NA	B	coding	1270	3810	27	3836	70.0	-3	True	NA	NA
PB.4118.1	chr15	+	1766	11	novel_in_catalog	WASH3P	novel	427	3	NA	NA	0	65	combination_of_known_junctions	FALSE	canonical	1	1001	junction_2	92496.87861874042	NA	2	1	TRUE	NA	NA	NA	B	coding	264	795	630	1424	25.0	NA	False	AATAAA	-24
PB.4118.2	chr15	+	1793	1	novel_in_catalog	WASH3P	novel	427	3	NA	NA	2	-3357	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	80.0	NA	False	AAAACA	-45
PB.9901.2	chr6	-	1182	6	full-splice_match	HLA-DRB1	ENST00000360004.5	1229	6	43	4	43	-4	multi-exon	FALSE	canonical	1	506945	junction_5	2035124.300430163	NA	4	NA	TRUE	NA	NA	NA	A	coding	266	801	64	864	30.0	-1	True	ATTAAA	-20
PB.52.14	chr1	-	2372	5	full-splice_match	ICMT	ENST00000343813.9	4771	5	-42	2441	-10	-143	multi-exon	FALSE	canonical	1	440461	junction_4	102424.50296529391	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	72	926	35.0	-19	True	NA	NA
PB.52.12	chr1	-	2356	4	full-splice_match	ICMT	ENST00000474756.1	1227	4	-18	-1111	-18	3	multi-exon	FALSE	canonical	1	42471	junction_2	273062.77816079016	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	405	764	25.0	-27	True	NA	NA
PB.52.13	chr1	-	2559	6	novel_not_in_catalog	ICMT	novel	4771	5	NA	NA	15	-3	any annotated donor/acceptor	FALSE	canonical	1	1088	junction_2	266915.78753112373	NA	0	NA	TRUE	NA	NA	NA	C	coding	119	360	614	973	35.0	6	True	NA	NA
PB.52.10	chr1	-	2455	5	full-splice_match	ICMT	ENST00000343813.9	4771	5	-23	2339	9	-41	multi-exon	FALSE	canonical	1	440461	junction_4	102424.50296529391	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	53	907	45.0	0	True	NA	NA
PB.52.11	chr1	-	2624	6	full-splice_match	ICMT	ENST00000489498.5	2612	6	-9	-3	-9	3	multi-exon	FALSE	canonical	1	87214	junction_3	247112.16231209668	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	466	1032	25.0	-18	True	NA	NA
PB.2588.4	chr12	-	1607	4	novel_not_in_catalog	TUBA1A	novel	1915	4	NA	NA	-2	-7	any annotated donor/acceptor	FALSE	canonical	1	12116	junction_2	1917237.833310782	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	102	1400	30.0	-1	True	AATAAA	-14
PB.12003.9	chrX	+	2254	5	novel_in_catalog	SAT1	novel	801	2	NA	NA	0	-29	intron_retention	FALSE	canonical	1	5013071	junction_3	167533.16100476944	NA	9	NA	TRUE	NA	NA	NA	C	coding	206	621	1519	2139	15.0	0	True	AATAGA	-24
PB.6594.17	chr2	+	2810	9	full-splice_match	MAT2A	ENST00000306434.7	2819	9	4	5	1	-5	multi-exon	FALSE	canonical	1	715016	junction_8	552725.8510904728	NA	26	1	TRUE	NA	NA	NA	C	coding	395	1188	120	1307	15.0	1	True	AATAAA	-15
PB.5405.5	chr18	-	1924	9	full-splice_match	PTPN2	ENST00000309660.9	3467	9	11	1532	-2	150	multi-exon	FALSE	canonical	1	55978	junction_5	72660.59036713094	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	84	1331	30.0	-37	True	AATAAA	-15
PB.5405.4	chr18	-	2356	9	full-splice_match	PTPN2	ENST00000309660.9	3467	9	8	1103	-5	579	multi-exon	FALSE	canonical	1	55978	junction_5	72660.59036713094	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	87	1334	30.0	306	False	AATAAA	-17
PB.11539.8	chr9	-	2500	5	novel_not_in_catalog	PAX5	novel	8615	10	NA	NA	6335	-79146	any annotated donor/acceptor	FALSE	canonical	1	2648	junction_4	50967.3092163006	NA	0	NA	TRUE	NA	NA	NA	B	coding	148	447	1413	1859	95.0	-3	True	NA	NA
PB.5405.1	chr18	-	1632	10	full-splice_match	PTPN2	ENST00000327283.7	1706	10	74	0	13	0	multi-exon	TRUE	canonical	1	55978	junction_6	68986.61334072157	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	124	1287	5.0	-1	True	ATTAAA	-19
PB.9481.10	chr5	+	5067	17	novel_in_catalog	CTNNA1	novel	696	6	NA	NA	0	-120	intron_retention	FALSE	canonical	1	840118	junction_11	356443.52323732834	NA	0	NA	TRUE	NA	NA	NA	C	coding	791	2376	83	2458	30.0	6	True	AATAAA	-17
PB.5405.3	chr18	-	3022	9	full-splice_match	PTPN2	ENST00000309660.9	3467	9	-11	456	-11	-307	multi-exon	FALSE	canonical	1	55978	junction_5	72660.59036713094	NA	0	NA	TRUE	NA	NA	NA	C	coding	415	1248	106	1353	85.0	287	False	NA	NA
PB.5405.2	chr18	-	3516	9	full-splice_match	PTPN2	ENST00000309660.9	3467	9	-48	-1	-2	1	multi-exon	FALSE	canonical	1	55978	junction_5	72660.59036713094	NA	1	NA	TRUE	NA	NA	NA	C	coding	415	1248	143	1390	10.0	250	False	ATTAAA	-17
PB.5928.13	chr19	+	3179	13	full-splice_match	CD22	ENST00000419549.6	2642	13	-103	-434	-57	8	multi-exon	FALSE	canonical	1	14887	junction_2	201179.6935942778	NA	1	1	TRUE	NA	NA	NA	C	coding	675	2028	486	2513	20.0	-6027	False	AATAAA	-29
PB.10369.11	chr7	+	3757	1	novel_in_catalog	EIF3B	novel	3055	19	NA	NA	-542	-3509	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	4715	False	NA	NA
PB.10338.23	chr6	-	7685	23	novel_not_in_catalog	THBS2	novel	5811	23	NA	NA	13	-6	any annotated donor/acceptor	FALSE	canonical	1	1663	junction_9	138673.93384965626	NA	1	NA	TRUE	NA	NA	NA	C	coding	723	2172	238	2409	15.0	-186	False	AATAAA	-21
PB.8727.2	chr4	-	7511	33	full-splice_match	ARAP2	ENST00000303965.8	7514	33	-4	7	-4	-7	multi-exon	TRUE	canonical	1	48516	junction_32	29522.19632750924	NA	0	NA	TRUE	NA	NA	NA	C	coding	1704	5115	495	5609	30.0	-31	True	ATTAAA	-17
PB.2588.2	chr12	-	1816	3	full-splice_match	TUBA1A	ENST00000546918.1	984	3	-13	-819	-1	-6	multi-exon	FALSE	canonical	1	2618574	junction_1	1039974.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	249	750	859	1608	30.0	0	True	AATAAA	-15
PB.10338.24	chr6	-	5143	21	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-8	-6	no_combination_of_known_junctions	FALSE	canonical	1	2058	junction_19	126375.83902086466	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	414	3107	15.0	-1	True	AATAAA	-21
PB.1838.9	chr11	-	6583	33	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	-3	-1848	combination_of_known_junctions	FALSE	canonical	1	129640	junction_32	68876.41292016464	NA	0	NA	TRUE	NA	NA	NA	B	coding	1686	5061	205	5265	35.0	-23	True	NA	NA
PB.10338.29	chr6	-	5885	22	novel_in_catalog	THBS2	novel	5811	23	NA	NA	-145	-7	combination_of_known_junctions	FALSE	canonical	1	485	junction_21	124429.96098059604	NA	14	2	TRUE	NA	NA	NA	C	coding	1172	3519	332	3850	15.0	1549	False	AATAAA	-20
PB.886.3	chr1	+	8493	8	full-splice_match	UHMK1	ENST00000489294.1	8478	8	-24	9	14	-9	multi-exon	FALSE	canonical	1	279935	junction_1	89999.36959371051	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	183	1442	45.0	-27	True	AATAAA	-6
PB.12008.2	chrX	+	1779	11	full-splice_match	PDK3	ENST00000379162.8	1809	11	24	6	24	-6	multi-exon	FALSE	canonical	1	81457	junction_1	32628.985686962442	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	212	1432	40.0	-44	True	NA	NA
PB.8254.10	chr3	+	3896	2	antisense	novelGene_AC021660.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	360	1083	58	1140	50.0	-1	True	ATTAAA	-13
PB.8254.11	chr3	+	3331	1	full-splice_match	GPR15	ENST00000284311.4	1252	1	375	-2454	375	2454	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	249	750	94	843	20.0	-1628	False	ATTAAA	-16
PB.8963.9	chr4	-	1854	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	20	923	20	-922	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	285	1583	35.0	-30	True	AATAAA	-20
PB.8963.8	chr4	-	2221	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	31	545	31	-544	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	274	1572	60.0	-19	True	TTTAAA	-8
PB.8963.7	chr4	-	2472	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	31	294	31	-293	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	274	1572	25.0	-19	True	AATAAA	-24
PB.5928.12	chr19	+	3095	14	novel_not_in_catalog	CD22	novel	554	4	NA	NA	-181	0	any annotated donor/acceptor	FALSE	canonical	1	4414	junction_1	220161.3265444739	NA	2	NA	TRUE	NA	NA	NA	C	coding	757	2274	164	2437	40.0	-6151	False	AATAAA	-21
PB.8963.3	chr4	-	2525	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	272	0	272	0	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	33	1331	5.0	222	False	AATAAA	-20
PB.8963.2	chr4	-	3512	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	18	-733	18	733	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	1	NA	TRUE	NA	NA	NA	C	coding	432	1299	287	1585	15.0	-32	True	NA	NA
PB.8963.1	chr4	-	3732	8	full-splice_match	CCNA2	ENST00000274026.9	2797	8	15	-950	15	950	multi-exon	FALSE	canonical	1	562055	junction_6	196285.1506430876	NA	2	NA	TRUE	NA	NA	NA	C	coding	432	1299	290	1588	25.0	-35	True	CATAAA	-19
PB.557.4	chr1	+	3047	13	novel_in_catalog	PTBP2	novel	2029	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	28344	junction_8	54897.05298151765	NA	2	1	TRUE	NA	NA	NA	C	coding	361	1086	82	1167	20.0	-4	True	ATTAAA	-17
PB.4122.8	chr16	-	2797	11	full-splice_match	NPRL3	ENST00000621703.4	2812	11	8	7	4	-7	multi-exon	FALSE	canonical	1	10284	junction_9	166660.48009471231	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	728	1900	35.0	-17	True	AATAAA	-25
PB.4122.9	chr16	-	2686	13	novel_not_in_catalog	NPRL3	novel	2917	3	NA	NA	-1	6	any annotated donor/acceptor	FALSE	canonical	1	553	junction_12	184736.8344037562	NA	3	1	TRUE	NA	NA	NA	C	coding	544	1635	161	1795	50.0	-26	True	AATAAA	-19
PB.8853.63	chr4	-	3725	26	novel_in_catalog	SEC31A	novel	1564	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	133055	junction_6	338433.8405870099	NA	1	1	TRUE	NA	NA	NA	C	coding	1194	3585	102	3686	70.0	-43	True	NA	NA
PB.11917.1	chr9	+	3083	9	full-splice_match	UAP1L1	ENST00000409858.7	3365	9	280	2	255	-2	multi-exon	FALSE	canonical	1	31819	junction_1	51192.50983542416	NA	1	NA	TRUE	NA	NA	NA	A	coding	381	1146	131	1276	20.0	-9321	False	AATAAA	-18
PB.4122.2	chr16	-	2373	13	novel_in_catalog	NPRL3	novel	2917	3	NA	NA	20	0	intron_retention	FALSE	canonical	1	78397	junction_10	165909.80775300442	NA	3	NA	TRUE	NA	NA	NA	C	coding	544	1635	380	2014	25.0	-1	True	GATAAA	-14
PB.4122.3	chr16	-	2234	12	novel_in_catalog	NPRL3	novel	2917	3	NA	NA	29	0	combination_of_known_junctions	TRUE	canonical	1	10284	junction_10	174273.70953471935	NA	3	NA	TRUE	NA	NA	NA	C	coding	390	1173	703	1875	25.0	8	True	GATAAA	-14
PB.4122.1	chr16	-	2449	14	novel_in_catalog	NPRL3	novel	2917	3	NA	NA	18	-1	intron_retention	FALSE	canonical	1	142124	junction_1	150996.50113544991	NA	2	NA	TRUE	NA	NA	NA	C	coding	569	1710	382	2091	25.0	-3	True	GATAAA	-13
PB.4122.6	chr16	-	3125	14	novel_in_catalog	NPRL3	novel	2917	3	NA	NA	19	-6	intron_retention	FALSE	canonical	1	31033	junction_12	177746.01725013144	NA	19	2	TRUE	NA	NA	NA	C	coding	491	1476	752	2227	35.0	-2	True	AATAAA	-26
PB.4122.7	chr16	-	2713	10	novel_in_catalog	NPRL3	novel	2917	3	NA	NA	19	-6	intron_retention	FALSE	canonical	1	16387	junction_9	162877.06407079232	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	643	1815	35.0	-2	True	AATAAA	-26
PB.608.5	chr1	-	3882	4	full-splice_match	LRIF1	ENST00000369763.4	3475	4	103	-510	-11	510	multi-exon	FALSE	canonical	1	78626	junction_3	64235.98068061232	NA	0	NA	TRUE	NA	NA	NA	C	coding	769	2310	289	2598	100.0	-25	False	NA	NA
PB.1838.6	chr11	-	6805	34	novel_in_catalog	PIK3C2A	novel	1593	13	NA	NA	-2	-1694	no_combination_of_known_junctions	FALSE	canonical	1	10686	junction_33	84628.87926590715	NA	0	NA	TRUE	NA	NA	NA	B	coding	1686	5061	273	5333	85.0	-22	True	NA	NA
PB.294.2	chr1	+	3814	5	novel_in_catalog	ZC3H12A	novel	2684	6	NA	NA	0	6	intron_retention	FALSE	canonical	1	69795	junction_1	72252.11848580981	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	2055	3059	25.0	0	True	AATAAA	-15
PB.8605.5	chr3	-	2582	14	full-splice_match	LSG1	ENST00000265245.9	3572	14	-19	1009	-19	316	multi-exon	FALSE	canonical	1	237450	junction_13	63431.02711117564	NA	1	NA	TRUE	NA	NA	NA	C	coding	658	1977	335	2311	70.0	-306	False	NA	NA
PB.1099.1	chr1	+	3268	9	full-splice_match	SYT14	ENST00000537238.5	5208	9	-20	1960	-20	0	multi-exon	FALSE	canonical	1	4536	junction_3	6758.112879162348	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	431	1984	30.0	-79	False	TATAAA	-17
PB.2662.39	chr12	-	2124	9	novel_in_catalog	PMEL	novel	2127	11	NA	NA	3	-2	intron_retention	FALSE	canonical	1	23707	junction_8	594408.1064617452	NA	0	NA	TRUE	NA	NA	NA	C	coding	442	1329	690	2018	5.0	2	True	AATAAA	-12
PB.2662.38	chr12	-	1961	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	-2	intron_retention	FALSE	canonical	1	16655	junction_6	450893.7044959696	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	32	1855	5.0	-1	True	AATAAA	-12
PB.547.1	chr1	+	5417	14	full-splice_match	FNBP1L	ENST00000260506.12	5341	14	-74	-2	-74	0	multi-exon	FALSE	canonical	1	217306	junction_3	54387.849777828334	NA	0	NA	TRUE	NA	NA	NA	C	coding	551	1656	226	1881	10.0	2	True	AATAAA	-24
PB.547.2	chr1	+	4090	15	full-splice_match	FNBP1L	ENST00000370253.6	3889	15	-204	3	-53	-1	multi-exon	FALSE	canonical	1	168217	junction_14	61686.359557474956	NA	1	NA	TRUE	NA	NA	NA	C	coding	547	1644	205	1848	20.0	-14	True	AATAAA	-21
PB.547.3	chr1	+	5336	14	novel_not_in_catalog	FNBP1L	novel	4212	17	NA	NA	-52	-1	intron_retention	FALSE	canonical	1	5926	junction_3	92964.71989413016	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1419	385	1803	20.0	-13	True	AATAAA	-21
PB.2662.31	chr12	-	1741	10	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	23707	junction_9	563070.1986265419	NA	0	NA	TRUE	NA	NA	NA	C	coding	533	1602	32	1633	5.0	-1	True	AATAAA	-14
PB.2662.30	chr12	-	1837	11	novel_in_catalog	PMEL	novel	2127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	16655	junction_7	515813.1080110799	NA	0	NA	TRUE	NA	NA	NA	C	coding	565	1698	32	1729	5.0	-1	True	AATAAA	-14
PB.2662.33	chr12	-	3176	10	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	464808.9363642062	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	951	1484	5.0	-1	True	AATAAA	-13
PB.2662.32	chr12	-	3234	10	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	595561.9931977311	NA	16	2	TRUE	NA	NA	NA	C	coding	293	882	944	1825	5.0	-1	True	AATAAA	-13
PB.2662.35	chr12	-	2016	12	novel_in_catalog	PMEL	novel	2127	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	73403	junction_2	495761.8436210197	NA	2	1	TRUE	NA	NA	NA	C	coding	626	1881	29	1909	5.0	2	True	AATAAA	-13
PB.2662.34	chr12	-	3112	8	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	525870.0064480512	NA	5	1	TRUE	NA	NA	NA	C	coding	293	882	822	1703	5.0	2	True	AATAAA	-13
PB.2662.37	chr12	-	1565	7	novel_not_in_catalog	PMEL	novel	2127	11	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	481184.03729841823	NA	5	1	TRUE	NA	NA	NA	C	coding	475	1428	32	1459	5.0	-1	True	AATAAA	-12
PB.5409.20	chr18	-	1033	4	full-splice_match	FAM210A	ENST00000592976.5	1091	4	28	30	2	-30	multi-exon	FALSE	canonical	1	142639	junction_3	34414.386926916995	NA	0	NA	TRUE	NA	NA	NA	C	coding	258	774	259	1032	65.0	-1	True	AAGAAA	-28
PB.5409.21	chr18	-	3659	1	novel_in_catalog	FAM210A	novel	4340	5	NA	NA	-17	-50952	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	35	True	NA	NA
PB.5779.1	chr19	-	1686	4	full-splice_match	ASF1B	ENST00000263382.7	2059	4	368	5	1	-5	multi-exon	FALSE	canonical	1	395413	junction_3	102284.37639683242	NA	0	NA	TRUE	NA	NA	NA	A	coding	202	609	133	741	15.0	-7	True	ATTAAA	-37
PB.6544.13	chr2	+	3742	26	novel_in_catalog	ZNF638	novel	871	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12236	junction_20	191096.35358435914	NA	1	NA	TRUE	NA	NA	NA	C	coding	628	1887	319	2205	30.0	-18	True	AATAAA	-19
PB.10808.20	chr7	-	2766	5	incomplete-splice_match	FAM3C	ENST00000359943.7	2508	10	26	20143	0	-6289	3prime_fragment	FALSE	canonical	1	157	junction_2	1050.3100435109625	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	-1	True	NA	NA
PB.8974.1	chr4	+	3268	16	novel_not_in_catalog	INTU	novel	737	2	NA	NA	-6	-6	any annotated donor/acceptor	FALSE	canonical	1	1289	junction_4	17210.601025595308	NA	0	NA	TRUE	NA	NA	NA	C	coding	941	2826	110	2935	40.0	-84	False	AATATA	-18
PB.6544.11	chr2	+	6487	28	novel_in_catalog	ZNF638	novel	871	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	156330	junction_1	166423.35054290286	NA	2	2	TRUE	NA	NA	NA	C	coding	1978	5937	306	6242	30.0	-19	True	AATAAA	-19
PB.6529.2	chr2	+	1778	6	full-splice_match	SNRNP27	ENST00000244227.7	1802	6	396	-372	-3	14	multi-exon	FALSE	canonical	1	222168	junction_4	151995.27726873622	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	30	497	15.0	-6	True	NA	NA
PB.6529.1	chr2	+	1423	6	full-splice_match	SNRNP27	ENST00000244227.7	1802	6	396	-17	-3	16	multi-exon	FALSE	canonical	1	222168	junction_4	151995.27726873622	NA	1	NA	TRUE	NA	NA	NA	C	coding	155	468	30	497	20.0	-6	True	NA	NA
PB.2122.1	chr11	-	2297	4	novel_in_catalog	C11orf24	novel	2063	4	NA	NA	-2	12	intron_retention	FALSE	canonical	1	67490	junction_3	187986.2935169004	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	722	1975	10.0	-1	True	ATTAAA	-33
PB.2122.2	chr11	-	2070	4	full-splice_match	C11orf24	ENST00000304271.10	2063	4	-9	2	0	-2	multi-exon	FALSE	canonical	1	279472	junction_3	89254.2295742274	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	509	1762	15.0	1	True	ATTAAA	-19
PB.2122.3	chr11	-	1798	5	novel_not_in_catalog	C11orf24	novel	2063	4	NA	NA	0	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	190659.6738904166	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	539	1309	15.0	-1	True	ATTAAA	-19
PB.2122.4	chr11	-	2158	4	novel_in_catalog	C11orf24	novel	2063	4	NA	NA	5	-4	intron_retention	FALSE	canonical	1	8141	junction_1	178073.00675160048	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	599	1852	20.0	30	True	ATTAAA	-17
PB.2122.5	chr11	-	2842	3	novel_in_catalog	C11orf24	novel	2063	4	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	279472	junction_2	80052.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	1284	2537	20.0	-1	True	ATTAAA	-16
PB.2122.6	chr11	-	2167	4	novel_in_catalog	C11orf24	novel	2063	4	NA	NA	8	2	intron_retention	FALSE	canonical	1	67490	junction_3	187986.2935169004	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	730	1983	25.0	-9	True	ACTAAA	-23
PB.2122.7	chr11	-	1897	4	full-splice_match	C11orf24	ENST00000304271.10	2063	4	0	166	0	-38	multi-exon	FALSE	canonical	1	279472	junction_3	89254.2295742274	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	500	1753	45.0	10	True	NA	NA
PB.2122.8	chr11	-	1643	5	novel_not_in_catalog	C11orf24	novel	2063	4	NA	NA	-6	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	190659.6738904166	NA	0	NA	TRUE	NA	NA	NA	C	coding	315	948	515	1462	30.0	-5	True	ACTAAA	-20
PB.2122.9	chr11	-	2714	3	novel_in_catalog	C11orf24	novel	2063	4	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	279472	junction_2	80052.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	417	1254	1284	2537	30.0	-1	True	ACTAAA	-16
PB.597.1	chr1	+	3208	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	-7	23973	-7	-23973	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	1	NA	TRUE	NA	NA	NA	C	coding	354	1065	118	1182	25.0	-31	True	NA	NA
PB.939.4	chr1	+	5535	4	full-splice_match	PRDX6	ENST00000470017.1	859	4	-3885	-791	-16	-1	multi-exon	FALSE	canonical	1	3400796	junction_2	309891.65079248085	NA	9	NA	TRUE	NA	NA	NA	C	coding	109	330	4263	4592	25.0	4	True	AATAAA	-19
PB.2770.9	chr12	-	1555	16	novel_in_catalog	NAP1L1	novel	13505	15	NA	NA	16	150	combination_of_known_junctions	FALSE	canonical	1	169678	junction_1	1514018.8986743065	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	98	1273	85.0	1	True	AAGAAA	-44
PB.2770.8	chr12	-	2302	15	novel_in_catalog	NAP1L1	novel	13505	15	NA	NA	141	151	intron_retention	FALSE	canonical	1	45880	junction_14	1565331.2526743228	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	142	1317	85.0	-12	True	AAGAAA	-45
PB.2770.7	chr12	-	1672	16	full-splice_match	NAP1L1	ENST00000393263.7	1896	16	-65	289	0	151	multi-exon	FALSE	canonical	1	954408	junction_5	1361761.3818602955	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	186	1361	85.0	887	False	AAGAAA	-45
PB.2770.6	chr12	-	2245	15	full-splice_match	NAP1L1	ENST00000618691.4	13505	15	403	10857	-18	151	multi-exon	FALSE	canonical	1	954408	junction_4	1405557.257375595	NA	0	NA	TRUE	NA	NA	NA	C	coding	391	1176	85	1260	85.0	988	False	AAGAAA	-45
PB.2770.5	chr12	-	2835	16	full-splice_match	NAP1L1	ENST00000393263.7	1896	16	36	-975	-18	724	multi-exon	FALSE	canonical	1	954408	junction_5	1361761.3818602955	NA	1	NA	TRUE	NA	NA	NA	C	coding	391	1176	85	1260	40.0	988	False	AATAAA	-17
PB.871.6	chr1	+	2383	12	novel_in_catalog	USP21	novel	1150	5	NA	NA	-17	0	intron_retention	FALSE	canonical	1	86205	junction_1	63048.09185556768	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	197	2116	50.0	4	True	AATAAA	-7
PB.6544.18	chr2	+	5633	2	novel_not_in_catalog	ZNF638	novel	871	5	NA	NA	8	-6620	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	95.0	-8	True	NA	NA
PB.1464.6	chr10	-	4249	14	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-15	0	intron_retention	FALSE	canonical	1	448881	junction_13	202562.96377853866	NA	2	NA	TRUE	NA	NA	NA	C	coding	522	1569	133	1701	35.0	0	True	NA	NA
PB.8221.2	chr3	-	2194	17	novel_in_catalog	UBA3	novel	2004	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	335944	junction_16	184145.87966888465	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	11	1015	15.0	1	True	AATAAA	-16
PB.8221.3	chr3	-	2525	16	novel_in_catalog	UBA3	novel	2004	16	NA	NA	1	-1	intron_retention	FALSE	canonical	1	335944	junction_15	189045.0920128846	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	15	1019	20.0	-3	True	AATAAA	-15
PB.8221.1	chr3	-	2643	15	novel_in_catalog	UBA3	novel	2004	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	335944	junction_14	179874.75953313196	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	13	1017	15.0	-1	True	AATAAA	-16
PB.8221.6	chr3	-	2073	17	full-splice_match	UBA3	ENST00000349511.8	2112	17	37	2	-3	-2	multi-exon	FALSE	canonical	1	42426	junction_16	220219.95900830853	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	19	1368	20.0	-7	True	AATAAA	-14
PB.8221.7	chr3	-	2040	17	novel_in_catalog	UBA3	novel	2004	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	10495	junction_14	238739.04224355743	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	25	1335	20.0	-13	True	AATAAA	-14
PB.8221.4	chr3	-	2115	18	full-splice_match	UBA3	ENST00000361055.8	2154	18	38	1	-2	-1	multi-exon	FALSE	canonical	1	335944	junction_17	178656.64959242826	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	18	1409	20.0	-6	True	AATAAA	-15
PB.8221.5	chr3	-	2740	14	novel_in_catalog	UBA3	novel	2004	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	335944	junction_13	178012.31974632386	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	18	1022	20.0	-6	True	AATAAA	-14
PB.8221.8	chr3	-	1790	18	full-splice_match	UBA3	ENST00000361055.8	2154	18	43	321	0	247	multi-exon	FALSE	canonical	1	335944	junction_17	178656.64959242826	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	13	1404	45.0	-1	True	AATAAA	-15
PB.8221.9	chr3	-	1479	18	full-splice_match	UBA3	ENST00000361055.8	2154	18	46	629	1	-61	multi-exon	FALSE	canonical	1	335944	junction_17	178656.64959242826	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	10	1401	30.0	2	True	AATATA	-38
PB.11308.2	chr8	+	2892	3	novel_in_catalog	MED30	novel	985	4	NA	NA	3	-3	intron_retention	FALSE	canonical	1	340138	junction_2	27415.5	NA	0	NA	TRUE	NA	NA	NA	B	coding	131	396	192	587	35.0	-16	True	AATAAA	-18
PB.3028.1	chr12	-	4883	24	novel_in_catalog	GOLGA3	novel	9252	24	NA	NA	0	302	combination_of_known_junctions	FALSE	canonical	1	93301	junction_23	81179.41464309681	NA	2	1	TRUE	NA	NA	NA	B	coding	1498	4497	240	4736	55.0	10	True	AGTAAA	-18
PB.3028.2	chr12	-	4765	24	novel_not_in_catalog	GOLGA3	novel	9252	24	NA	NA	-3	301	any annotated donor/acceptor	FALSE	canonical	1	93301	junction_23	78064.94604907259	NA	1	NA	TRUE	NA	NA	NA	B	coding	1458	4377	243	4619	50.0	7	True	AGTAAA	-17
PB.6277.1	chr19	+	1970	7	novel_in_catalog	ZNF446	novel	3922	7	NA	NA	-26	2	intron_retention	FALSE	canonical	1	61481	junction_1	21583.925003473203	NA	1	NA	TRUE	NA	NA	NA	C	coding	438	1317	154	1470	40.0	-307	False	CATAAA	-13
PB.4.1	chr1	-	1707	2	novel_not_in_catalog	AL669831.3	novel	941	4	NA	NA	231	-96494	any annotated donor/acceptor	FALSE	canonical	1	6042	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	40.0	-17	False	ATTAAA	-12
PB.6277.3	chr19	+	2054	7	full-splice_match	ZNF446	ENST00000594369.5	2238	7	180	4	-84	2	multi-exon	FALSE	canonical	1	45047	junction_1	25797.492427667374	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	238	1554	40.0	-83	False	CATAAA	-13
PB.6277.2	chr19	+	2094	6	incomplete-splice_match	ZNF446	ENST00000596341.5	3922	7	2137	0	-2	0	intron_retention	FALSE	canonical	1	61481	junction_1	21708.97764888987	NA	0	NA	TRUE	NA	NA	NA	C	coding	273	822	120	941	35.0	-273	False	CATAAA	-15
PB.1464.7	chr10	-	2662	15	full-splice_match	P4HA1	ENST00000373008.6	2727	15	-16	81	-16	-74	multi-exon	FALSE	canonical	1	448881	junction_14	195656.72187210896	NA	2	NA	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	30.0	-1	True	TTTAAA	-21
PB.597.9	chr1	+	4500	9	full-splice_match	GNAI3	ENST00000369851.5	27174	9	4	22670	4	-22670	multi-exon	FALSE	canonical	1	1030775	junction_3	172368.59008382118	NA	2	NA	TRUE	NA	NA	NA	C	coding	354	1065	107	1171	15.0	-20	True	NA	NA
PB.11316.2	chr8	-	852	7	full-splice_match	MRPL13	ENST00000306185.7	1086	7	236	-2	-51	2	multi-exon	FALSE	canonical	1	958590	junction_3	68867.60704343436	NA	0	NA	TRUE	NA	NA	NA	C	coding	154	465	129	593	25.0	-1	True	AATAAA	-20
PB.11666.4	chr9	+	6109	19	novel_not_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-72	26329	any annotated donor/acceptor	FALSE	canonical	1	4882	junction_18	27427.744410440395	NA	2	NA	TRUE	NA	NA	NA	C	coding	1253	3762	378	4139	10.0	-3	True	AATAAA	-15
PB.11666.5	chr9	+	6012	19	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-105	-10	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	18147.765701081717	NA	0	NA	TRUE	NA	NA	NA	C	coding	1550	4653	2	4654	35.0	7	True	NA	NA
PB.11666.6	chr9	+	1846	2	incomplete-splice_match	ERCC6L2	ENST00000288985.11	4564	14	326	86184	-116	-46461	3prime_fragment	FALSE	canonical	1	69979	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	13	618	90.0	-4	True	TATAAA	-35
PB.294.1	chr1	+	3309	5	novel_in_catalog	ZC3H12A	novel	2684	6	NA	NA	-31	-4	intron_retention	FALSE	canonical	1	69795	junction_1	72120.40878454586	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	148	990	20.0	0	True	AATAAA	-24
PB.8729.3	chr4	+	2158	4	full-splice_match	C4orf19	ENST00000381980.8	1943	4	3	-218	3	218	multi-exon	FALSE	canonical	1	14351	junction_1	8134.363828160682	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	170	1114	65.0	19	True	NA	NA
PB.8729.2	chr4	+	2337	4	full-splice_match	C4orf19	ENST00000381980.8	1943	4	-12	-382	-12	382	multi-exon	FALSE	canonical	1	14351	junction_1	8134.363828160682	NA	2	1	TRUE	NA	NA	NA	C	coding	314	945	185	1129	100.0	4	True	NA	NA
PB.8729.1	chr4	+	2509	4	full-splice_match	C4orf19	ENST00000381980.8	1943	4	-39	-527	-39	527	multi-exon	FALSE	canonical	1	14351	junction_1	8134.363828160682	NA	1	NA	TRUE	NA	NA	NA	C	coding	314	945	212	1156	95.0	-23	False	NA	NA
PB.11666.3	chr9	+	2879	16	novel_in_catalog	ERCC6L2	novel	4564	14	NA	NA	-133	269	combination_of_known_junctions	FALSE	canonical	1	69979	junction_1	19153.518782023668	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2850	30	2879	55.0	-21	True	AAGAAA	-29
PB.2762.10	chr12	+	2752	7	novel_not_in_catalog	AC073612.1	novel	771	5	NA	NA	12201	4219	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95629.10146222342	NA	4	NA	TRUE	NA	NA	NA	B	coding	300	903	385	1287	100.0	4	True	NA	NA
PB.2762.11	chr12	+	3836	7	novel_not_in_catalog	AC073612.1	novel	771	5	NA	NA	12234	5087	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95629.10146222342	NA	1	NA	TRUE	NA	NA	NA	B	coding	300	903	352	1254	25.0	-144	False	AATAAA	-18
PB.2762.12	chr12	+	2928	7	novel_not_in_catalog	AC073612.1	novel	771	5	NA	NA	12269	4219	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	95629.10146222342	NA	10	1	TRUE	NA	NA	NA	B	coding	300	903	317	1219	100.0	-109	False	NA	NA
PB.3542.24	chr14	-	3098	12	full-splice_match	NUMB	ENST00000557597.5	3547	12	-9	458	-1	-1	multi-exon	FALSE	canonical	1	110264	junction_1	138411.90221011156	NA	1	NA	TRUE	NA	NA	NA	C	coding	640	1923	272	2194	35.0	14	True	AATAAA	-32
PB.9062.3	chr4	-	5315	13	novel_not_in_catalog	SH3RF1	novel	5272	12	NA	NA	64	-5	any annotated donor/acceptor	FALSE	canonical	1	1047	junction_9	78588.23248249207	NA	2	NA	TRUE	NA	NA	NA	C	coding	579	1740	1318	3057	10.0	8	True	ATTAAA	-17
PB.1404.8	chr10	-	2662	5	novel_not_in_catalog	ERCC6	novel	8008	21	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	1	7242	junction_1	47943.459050088364	NA	0	NA	TRUE	NA	NA	NA	C	coding	487	1464	1067	2530	25.0	-11	True	AATAAA	-16
PB.1404.9	chr10	-	6593	5	incomplete-splice_match	ERCC6	ENST00000447839.6	3411	6	-15	3744	-15	-3612	3prime_fragment	FALSE	canonical	1	71025	junction_4	18243.967227209658	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	109	1554	15.0	-26	True	AATAAA	-12
PB.9062.6	chr4	-	2359	10	incomplete-splice_match	SH3RF1	ENST00000284637.13	5272	12	119	22016	119	-3	3prime_fragment	FALSE	canonical	1	82739	junction_9	50703.847424572436	NA	0	NA	TRUE	NA	NA	NA	C	coding	712	2136	224	2359	45.0	1	True	NA	NA
PB.9777.12	chr6	+	3301	11	full-splice_match	MRS2	ENST00000378386.7	3313	11	11	1	11	-1	multi-exon	FALSE	canonical	1	161085	junction_6	76623.27295384869	NA	8	1	TRUE	NA	NA	NA	C	coding	443	1332	83	1414	45.0	29	True	AATAAA	-13
PB.1404.4	chr10	-	6817	21	full-splice_match	ERCC6	ENST00000355832.9	8008	21	-97	1288	-83	-1	multi-exon	FALSE	canonical	1	46299	junction_14	17926.74406856973	NA	0	NA	TRUE	NA	NA	NA	C	coding	1493	4482	177	4658	60.0	-3	True	AATAAA	-19
PB.1404.5	chr10	-	4667	21	full-splice_match	ERCC6	ENST00000355832.9	8008	21	-17	3358	-3	62	multi-exon	FALSE	canonical	1	46299	junction_14	17926.74406856973	NA	0	NA	TRUE	NA	NA	NA	C	coding	1493	4482	97	4578	20.0	-14	True	NA	NA
PB.1404.6	chr10	-	5086	6	full-splice_match	ERCC6	ENST00000447839.6	3411	6	0	-1675	0	1675	multi-exon	FALSE	canonical	1	33948	junction_1	27945.665657486134	NA	1	NA	TRUE	NA	NA	NA	C	coding	1061	3186	94	3279	20.0	-11	True	NA	NA
PB.1404.7	chr10	-	3425	6	full-splice_match	ERCC6	ENST00000447839.6	3411	6	-14	0	-14	0	multi-exon	FALSE	canonical	1	33948	junction_1	27945.665657486134	NA	0	NA	TRUE	NA	NA	NA	C	coding	1061	3186	108	3293	25.0	-25	True	AATAAA	-16
PB.1404.1	chr10	-	8229	21	full-splice_match	ERCC6	ENST00000355832.9	8008	21	-97	-124	-83	124	multi-exon	TRUE	canonical	1	46299	junction_14	17926.74406856973	NA	1	NA	TRUE	NA	NA	NA	C	coding	1493	4482	177	4658	35.0	-3	True	NA	NA
PB.1404.2	chr10	-	7225	21	full-splice_match	ERCC6	ENST00000355832.9	8008	21	-2	785	-2	502	multi-exon	FALSE	canonical	1	46299	junction_14	17926.74406856973	NA	2	NA	TRUE	NA	NA	NA	C	coding	1493	4482	82	4563	25.0	1	True	AATAAA	-15
PB.1404.3	chr10	-	6978	21	full-splice_match	ERCC6	ENST00000355832.9	8008	21	-46	1076	-32	211	multi-exon	FALSE	canonical	1	46299	junction_14	17926.74406856973	NA	2	NA	TRUE	NA	NA	NA	C	coding	1493	4482	126	4607	10.0	48	False	NA	NA
PB.497.2	chr1	+	3790	10	full-splice_match	PRKACB	ENST00000370689.6	4513	10	-103	826	-103	-822	multi-exon	FALSE	canonical	1	112517	junction_1	138970.72009741858	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	368	1423	60.0	6	True	TTTAAA	-37
PB.2096.1	chr11	+	2007	6	incomplete-splice_match	RCE1	ENST00000524849.5	1428	8	-28	8	11	-2	intron_retention	TRUE	canonical	1	75802	junction_2	95162.36953880457	NA	0	NA	TRUE	NA	NA	NA	C	coding	135	408	342	749	15.0	-18	True	ATTAAA	-17
PB.2096.2	chr11	+	1455	8	full-splice_match	RCE1	ENST00000309657.7	1485	8	15	15	-10	-1	multi-exon	FALSE	canonical	1	241385	junction_1	40661.65672864753	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	30	1019	10.0	-14	True	ATTAAA	-24
PB.3542.27	chr14	-	2688	11	full-splice_match	NUMB	ENST00000554546.5	3607	11	33	886	-4	-320	multi-exon	FALSE	canonical	1	276892	junction_9	85105.05034602823	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1779	325	2103	35.0	-39	True	AATAAA	-21
PB.102.9	chr1	+	3622	14	novel_not_in_catalog	TNFRSF8	novel	3593	14	NA	NA	492	-1	any annotated donor/acceptor	FALSE	canonical	1	158	junction_1	33447.38846847309	NA	3	NA	TRUE	NA	NA	NA	C	coding	483	1452	498	1949	35.0	-1140	False	CATAAA	-16
PB.102.8	chr1	+	3536	16	novel_not_in_catalog	TNFRSF8	novel	3593	14	NA	NA	457	-1	any annotated donor/acceptor	FALSE	canonical	1	25	junction_1	32500.28831639635	NA	0	NA	TRUE	NA	NA	NA	C	coding	546	1641	223	1863	35.0	-1175	False	CATAAA	-16
PB.497.4	chr1	+	4485	10	full-splice_match	PRKACB	ENST00000370689.6	4513	10	26	2	26	0	multi-exon	FALSE	canonical	1	112517	junction_1	138970.72009741858	NA	0	NA	TRUE	NA	NA	NA	C	coding	351	1056	239	1294	30.0	9	True	ATTAAA	-21
PB.497.5	chr1	+	2632	1	genic	PRKACB	novel	NA	NA	NA	NA	-27	-103380	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	2	True	AAGAAA	-38
PB.102.5	chr1	+	2402	15	full-splice_match	TNFRSF8	ENST00000263932.6	3686	15	117	1167	24	-77	multi-exon	FALSE	canonical	1	47256	junction_13	19732.397739530297	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	106	1893	5.0	-1608	False	NA	NA
PB.102.4	chr1	+	3731	14	novel_in_catalog	TNFRSF8	novel	3593	14	NA	NA	-111	-10	no_combination_of_known_junctions	FALSE	canonical	1	971	junction_11	24973.844288699587	NA	0	NA	TRUE	NA	NA	NA	C	coding	577	1734	334	2067	40.0	0	True	CATAAA	-7
PB.102.7	chr1	+	2045	3	novel_not_in_catalog	TNFRSF8	novel	3593	14	NA	NA	68	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	30044.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	141	371	35.0	-1564	False	CATAAA	-17
PB.102.6	chr1	+	3137	12	incomplete-splice_match	TNFRSF8	ENST00000263932.6	3686	15	-1	16366	-1	-15276	3prime_fragment	FALSE	canonical	1	58622	junction_1	19129.741686487447	NA	2	NA	TRUE	NA	NA	NA	C	coding	464	1395	224	1618	80.0	13	True	NA	NA
PB.102.1	chr1	+	3555	15	full-splice_match	TNFRSF8	ENST00000263932.6	3686	15	129	2	36	0	multi-exon	FALSE	canonical	1	47256	junction_13	19732.397739530297	NA	0	NA	TRUE	NA	NA	NA	C	coding	595	1788	94	1881	35.0	-1596	False	CATAAA	-17
PB.927.1	chr1	-	3021	20	full-splice_match	KIFAP3	ENST00000361580.6	2957	20	111	-175	4	175	multi-exon	TRUE	canonical	1	245365	junction_13	64568.77175689426	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	118	2496	20.0	67	True	TATAAA	-28
PB.102.3	chr1	+	2548	8	novel_not_in_catalog	TNFRSF8	novel	3593	14	NA	NA	-115	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	34286.133472437454	NA	1	1	TRUE	NA	NA	NA	C	coding	279	840	34	873	30.0	-4	True	CATAAA	-18
PB.102.2	chr1	+	3821	14	novel_in_catalog	TNFRSF8	novel	3593	14	NA	NA	-213	10	combination_of_known_junctions	FALSE	canonical	1	1741	junction_1	28260.878269999255	NA	1	NA	TRUE	NA	NA	NA	C	coding	484	1455	681	2135	40.0	-2	True	CATAAA	-29
PB.6910.13	chr2	-	3959	24	novel_in_catalog	STAT1	novel	663	3	NA	NA	-2	-115	combination_of_known_junctions	FALSE	canonical	1	21618	junction_23	381966.3952235631	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	155	2407	20.0	-11	True	ATTAAA	-15
PB.6910.12	chr2	-	4009	24	full-splice_match	STAT1	ENST00000540176.5	4216	24	92	115	10	-115	multi-exon	FALSE	canonical	1	21148	junction_17	384804.9340570643	NA	0	NA	TRUE	NA	NA	NA	C	coding	426	1281	1177	2457	20.0	1	True	ATTAAA	-15
PB.6910.11	chr2	-	4177	26	novel_in_catalog	STAT1	novel	663	3	NA	NA	13	-115	combination_of_known_junctions	FALSE	canonical	1	12144	junction_3	468497.588316962	NA	0	NA	TRUE	NA	NA	NA	C	coding	716	2151	294	2444	20.0	4	True	ATTAAA	-15
PB.6910.10	chr2	-	4226	26	novel_in_catalog	STAT1	novel	663	3	NA	NA	-3	-115	combination_of_known_junctions	FALSE	canonical	1	32434	junction_23	465666.9244809143	NA	1	NA	TRUE	NA	NA	NA	C	coding	752	2259	416	2674	20.0	-41	True	ATTAAA	-15
PB.2764.12	chr12	+	2968	17	full-splice_match	TBC1D15	ENST00000485960.6	2489	17	7	-486	3	486	multi-exon	FALSE	canonical	1	83706	junction_5	108905.92048988889	NA	0	NA	TRUE	NA	NA	NA	C	coding	674	2025	17	2041	35.0	7	True	TATAAA	-23
PB.2764.13	chr12	+	2267	18	novel_in_catalog	TBC1D15	novel	863	7	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	2645	junction_1	152662.12309253763	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	380	2107	25.0	10	True	ATTAAA	-21
PB.2764.10	chr12	+	3283	18	novel_in_catalog	TBC1D15	novel	863	7	NA	NA	-1	666	combination_of_known_junctions	FALSE	canonical	1	7791	junction_1	151464.16314174247	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	449	2176	35.0	3	True	AATAAA	-11
PB.2764.11	chr12	+	2249	16	full-splice_match	TBC1D15	ENST00000462788.6	1995	16	6	-260	2	-23	multi-exon	FALSE	canonical	1	12418	junction_4	124241.72730780374	NA	1	NA	TRUE	NA	NA	NA	C	coding	445	1338	494	1831	85.0	6	True	NA	NA
PB.4612.1	chr16	+	2210	10	novel_not_in_catalog	ACSF3	novel	550	4	NA	NA	22	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	103471.48786877366	NA	5	1	TRUE	NA	NA	NA	C	coding	576	1731	105	1835	30.0	48	True	AAAACA	-17
PB.4612.2	chr16	+	2418	11	full-splice_match	ACSF3	ENST00000614302.4	3751	11	69	1264	-5	-2	multi-exon	FALSE	canonical	1	23144	junction_2	101367.84994074798	NA	2	1	TRUE	NA	NA	NA	C	coding	576	1731	313	2043	30.0	0	True	AAAACA	-17
PB.4612.3	chr16	+	2282	10	novel_in_catalog	ACSF3	novel	550	4	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	23144	junction_2	116081.11967876837	NA	2	1	TRUE	NA	NA	NA	C	coding	368	1107	326	1432	30.0	-13	True	AAAACA	-17
PB.4612.4	chr16	+	2514	12	novel_in_catalog	ACSF3	novel	550	4	NA	NA	-4	-2	no_combination_of_known_junctions	FALSE	canonical	1	3762	junction_6	119555.79297342362	NA	2	1	TRUE	NA	NA	NA	C	coding	450	1353	312	1664	30.0	1	True	AAAACA	-17
PB.4612.5	chr16	+	2227	11	novel_in_catalog	ACSF3	novel	550	4	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	1	4093	junction_10	113912.73076811915	NA	1	1	TRUE	NA	NA	NA	C	coding	610	1833	297	2129	45.0	16	True	NA	NA
PB.11762.18	chr9	+	2716	18	novel_not_in_catalog	GSN	novel	3341	25	NA	NA	-2328	-1	any annotated donor/acceptor	FALSE	canonical	1	277	junction_1	962506.9415803431	NA	1	NA	TRUE	NA	NA	NA	C	coding	731	2196	283	2478	10.0	-8560	False	AATAAA	-16
PB.9365.18	chr5	-	1525	3	full-splice_match	ST8SIA4	ENST00000451528.2	1794	3	-68	337	-16	-337	multi-exon	FALSE	canonical	1	162714	junction_2	18569.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	328	834	30.0	-20	True	CATAAA	-22
PB.9365.19	chr5	-	3405	1	novel_in_catalog	ST8SIA4	novel	6303	5	NA	NA	4	-4196	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	0	True	AATAAA	-26
PB.4353.1	chr16	-	1716	6	full-splice_match	KCTD13	ENST00000568000.5	2528	6	813	-1	6	1	multi-exon	FALSE	canonical	1	182661	junction_4	36783.07528524498	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	190	1179	10.0	-8	True	AATAAA	-19
PB.9365.12	chr5	-	5078	4	incomplete-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-6	45204	-6	33172	3prime_fragment	FALSE	canonical	1	162714	junction_3	22541.077264013406	NA	8	NA	TRUE	NA	NA	NA	C	coding	266	801	318	1118	100.0	-10	True	NA	NA
PB.9365.10	chr5	-	2766	5	full-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-15	3552	-15	-3552	multi-exon	FALSE	canonical	1	100022	junction_1	44773.92744876755	NA	2	NA	TRUE	NA	NA	NA	C	coding	359	1080	327	1406	25.0	-19	True	AATAAA	-20
PB.9365.11	chr5	-	1519	5	novel_not_in_catalog	ST8SIA4	novel	6303	5	NA	NA	-15	36249	any annotated donor/acceptor	FALSE	canonical	1	15472	junction_1	79344.39192020756	NA	0	NA	TRUE	NA	NA	NA	C	coding	282	849	327	1175	25.0	-19	True	AATAAA	-16
PB.9365.16	chr5	-	2587	4	incomplete-splice_match	ST8SIA4	ENST00000231461.9	6303	5	7	47682	7	30694	3prime_fragment	FALSE	canonical	1	162714	junction_3	22541.077264013406	NA	2	NA	TRUE	NA	NA	NA	C	coding	266	801	305	1105	0.0	3	True	ATTAAA	-18
PB.9365.17	chr5	-	1774	3	full-splice_match	ST8SIA4	ENST00000451528.2	1794	3	-68	88	-16	-88	multi-exon	FALSE	canonical	1	162714	junction_2	18569.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	328	834	70.0	-20	True	AATAAA	-32
PB.9365.14	chr5	-	4301	4	incomplete-splice_match	ST8SIA4	ENST00000231461.9	6303	5	8	45967	8	32409	3prime_fragment	FALSE	canonical	1	162714	junction_3	22541.077264013406	NA	4	NA	TRUE	NA	NA	NA	C	coding	266	801	304	1104	50.0	4	True	AATAAA	-18
PB.9365.15	chr5	-	4160	4	incomplete-splice_match	ST8SIA4	ENST00000231461.9	6303	5	-15	46131	-15	32245	3prime_fragment	FALSE	canonical	1	162714	junction_3	22541.077264013406	NA	4	NA	TRUE	NA	NA	NA	C	coding	266	801	327	1127	50.0	-19	True	AATACA	-8
PB.11658.2	chr9	+	4744	18	novel_not_in_catalog	PHF2	novel	5569	22	NA	NA	72323	-2	any annotated donor/acceptor	FALSE	canonical	1	165616	junction_10	47330.25721584077	NA	1	NA	TRUE	NA	NA	NA	B	coding	926	2781	55	2835	20.0	-331	False	AGTAAA	-22
PB.11658.1	chr9	+	5225	22	novel_not_in_catalog	PHF2	novel	5569	22	NA	NA	5	-2	any annotated donor/acceptor	FALSE	canonical	1	106934	junction_1	53970.39170611571	NA	1	NA	TRUE	NA	NA	NA	B	coding	1097	3294	23	3316	20.0	-14	True	AGTAAA	-22
PB.174.1	chr1	-	2710	9	full-splice_match	STPG1	ENST00000337248.8	2715	9	5	0	5	0	multi-exon	FALSE	canonical	1	55437	junction_6	8952.176687124758	NA	1	NA	TRUE	NA	NA	NA	A	coding	334	1005	163	1167	20.0	-43	True	NA	NA
PB.9401.18	chr5	-	2266	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	51	1440	51	1118	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	224	675	331	1005	0.0	-1	True	AATACA	-35
PB.7982.14	chr3	-	2270	1	novel_in_catalog	NGLY1	novel	2534	12	NA	NA	13	-2491	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	129	390	124	513	70.0	12	True	NA	NA
PB.4770.11	chr17	-	2918	19	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	-15	0	any annotated donor/acceptor	FALSE	canonical	1	7439	junction_7	59163.339870790485	NA	0	NA	TRUE	NA	NA	NA	C	coding	708	2127	256	2382	15.0	-19	True	AATAAA	-17
PB.4770.10	chr17	-	3211	19	novel_in_catalog	PIK3R6	novel	3291	20	NA	NA	-25	0	no_combination_of_known_junctions	FALSE	canonical	1	7439	junction_7	57612.254762033335	NA	0	NA	TRUE	NA	NA	NA	C	coding	633	1902	774	2675	15.0	-29	True	AATAAA	-17
PB.4770.13	chr17	-	3222	21	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	3	-1	any annotated donor/acceptor	FALSE	canonical	1	2471	junction_11	59003.36861169453	NA	13	2	TRUE	NA	NA	NA	C	coding	394	1185	1503	2687	15.0	-1	True	AATAAA	-16
PB.4770.12	chr17	-	3592	18	novel_in_catalog	PIK3R6	novel	3291	20	NA	NA	7	-1	intron_retention	FALSE	canonical	1	18111	junction_2	51736.19662898711	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	1149	3221	15.0	20	True	AATAAA	-16
PB.4770.15	chr17	-	3106	20	novel_not_in_catalog	PIK3R6	novel	3291	20	NA	NA	6	-3	any annotated donor/acceptor	FALSE	canonical	1	6396	junction_8	53275.20111927471	NA	3	1	TRUE	NA	NA	NA	C	coding	508	1527	235	1761	15.0	2	True	AATAAA	-14
PB.3430.2	chr14	-	4292	10	novel_not_in_catalog	TRIM9	novel	5284	10	NA	NA	-53	-6	any annotated donor/acceptor	FALSE	canonical	1	10088	junction_2	27433.770218383434	NA	0	NA	TRUE	NA	NA	NA	C	coding	692	2079	191	2269	45.0	-25	True	AATAAA	-16
PB.3430.1	chr14	-	4361	10	full-splice_match	TRIM9	ENST00000298355.7	5284	10	917	6	-68	-6	multi-exon	FALSE	canonical	1	48953	junction_3	17242.755612462617	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	206	2338	45.0	949	False	AATAAA	-16
PB.9401.12	chr5	-	3595	3	full-splice_match	TMED7	ENST00000456936.3	3757	3	50	112	50	-112	multi-exon	FALSE	canonical	1	618585	junction_2	102770.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	224	675	332	1006	70.0	-2	True	NA	NA
PB.9990.2	chr6	-	2113	7	full-splice_match	MRPS10	ENST00000053468.3	2110	7	-10	7	-10	-7	multi-exon	FALSE	canonical	1	100765	junction_5	142603.64289925728	NA	1	NA	TRUE	NA	NA	NA	C	coding	201	606	27	632	20.0	-15	True	ATTAAA	-25
PB.9315.34	chr5	+	2984	1	novel_in_catalog	TENT2	novel	3523	15	NA	NA	681	-341	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.222.1	chr1	-	1870	10	full-splice_match	DNAJC8	ENST00000489277.5	1600	10	8	-278	3	-3	multi-exon	FALSE	canonical	1	41535	junction_8	174185.238231184	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	11	True	NA	NA
PB.5635.14	chr19	+	3368	8	novel_not_in_catalog	KDM4B	novel	5703	24	NA	NA	-4361	1	any annotated donor/acceptor	FALSE	canonical	1	251	junction_7	105963.33229731416	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	75	1163	15.0	-1	True	ATTAAA	-17
PB.7982.11	chr3	-	2170	12	full-splice_match	NGLY1	ENST00000280700.9	2473	12	137	166	0	0	multi-exon	FALSE	canonical	1	266653	junction_11	54062.00270411896	NA	0	NA	TRUE	NA	NA	NA	C	coding	654	1965	25	1989	30.0	-1	True	AATAAA	-11
PB.11177.18	chr8	-	1833	5	incomplete-splice_match	TRAM1	ENST00000262213.6	2785	11	29	21614	-1	-555	3prime_fragment	FALSE	canonical	1	1557926	junction_3	304526.41376190586	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	142	630	85.0	9	True	GGGGCT	-41
PB.4318.12	chr16	+	2615	2	incomplete-splice_match	RBBP6	ENST00000562430.5	6482	13	14777	616	5974	13	5prime_fragment	FALSE	canonical	1	390695	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	736	2208	408	2615	75.0	-2941	False	NA	NA
PB.4318.11	chr16	+	2759	17	incomplete-splice_match	RBBP6	ENST00000319715.9	6840	18	1083	3374	84	-624	3prime_fragment	FALSE	canonical	1	116270	junction_16	69952.68845416052	NA	0	NA	TRUE	NA	NA	NA	C	coding	900	2700	60	2759	70.0	-9718	False	NA	NA
PB.4318.10	chr16	+	3750	16	incomplete-splice_match	RBBP6	ENST00000348022.6	5739	17	-998	3363	0	-613	3prime_fragment	FALSE	canonical	1	68053	junction_15	75409.99973431168	NA	0	NA	TRUE	NA	NA	NA	C	coding	902	2706	1043	3748	60.0	1	True	NA	NA
PB.7140.1	chr20	-	2405	14	full-splice_match	CPXM1	ENST00000380605.2	2391	14	-15	1	-15	-1	multi-exon	TRUE	canonical	1	155943	junction_13	78743.1960446453	NA	0	NA	TRUE	NA	NA	NA	A	coding	734	2205	81	2285	5.0	-47	True	ATTAAA	-21
PB.487.9	chr1	-	3726	22	novel_in_catalog	FUBP1	novel	605	2	NA	NA	10	-4	intron_retention	FALSE	canonical	1	12526	junction_3	452004.62250996043	NA	2	NA	TRUE	NA	NA	NA	C	coding	653	1962	73	2034	30.0	-13	True	AATAAA	-16
PB.9315.31	chr5	+	3174	17	novel_in_catalog	TENT2	novel	781	5	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	25282	junction_3	147033.75148307785	NA	2	1	TRUE	NA	NA	NA	C	coding	484	1455	346	1800	5.0	-1523	False	AATAAA	-20
PB.487.5	chr1	-	2512	23	novel_in_catalog	FUBP1	novel	605	2	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	15553	junction_4	481149.0418860197	NA	0	NA	TRUE	NA	NA	NA	C	coding	642	1929	97	2025	25.0	9	True	AATAAA	-19
PB.487.7	chr1	-	4127	22	novel_in_catalog	FUBP1	novel	605	2	NA	NA	1	-2	intron_retention	FALSE	canonical	1	60710	junction_3	439370.7141188941	NA	1	NA	TRUE	NA	NA	NA	C	coding	642	1929	106	2034	25.0	0	True	AATAAA	-18
PB.9315.30	chr5	+	2711	16	novel_not_in_catalog	TENT2	novel	781	5	NA	NA	4	12	any annotated donor/acceptor	FALSE	canonical	1	359	junction_7	136164.56313048396	NA	0	NA	TRUE	NA	NA	NA	C	coding	230	693	260	952	35.0	6	True	AATAAA	-29
PB.487.1	chr1	-	7090	19	novel_in_catalog	FUBP1	novel	605	2	NA	NA	15	0	intron_retention	TRUE	canonical	1	785899	junction_15	237703.11264900965	NA	6	NA	TRUE	NA	NA	NA	C	coding	642	1929	68	1996	20.0	-8	True	AATAAA	-20
PB.487.2	chr1	-	5007	21	novel_in_catalog	FUBP1	novel	605	2	NA	NA	-1	0	intron_retention	FALSE	canonical	1	132768	junction_1	387798.2736671574	NA	2	NA	TRUE	NA	NA	NA	C	coding	642	1929	108	2036	20.0	-2	True	AATAAA	-20
PB.10526.4	chr7	+	3545	16	incomplete-splice_match	ZMIZ2	ENST00000433667.5	3800	18	883	0	821	0	5prime_fragment	FALSE	canonical	1	139636	junction_4	201274.06048741934	NA	0	NA	TRUE	NA	NA	NA	B	coding	736	2211	264	2474	5.0	-9182	False	ATTAAA	-20
PB.10526.5	chr7	+	3103	11	novel_not_in_catalog	ZMIZ2	novel	3773	18	NA	NA	325	0	intron_retention	FALSE	canonical	1	48038	junction_7	255142.24312951392	NA	1	NA	TRUE	NA	NA	NA	B	coding	280	843	614	1456	5.0	-5977	False	ATTAAA	-20
PB.10526.6	chr7	+	2861	1	novel_in_catalog	ZMIZ2	novel	5144	19	NA	NA	1274	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	294	885	1966	2850	40.0	765	False	NA	NA
PB.10526.1	chr7	+	3923	18	novel_in_catalog	ZMIZ2	novel	3773	18	NA	NA	-44	7	intron_retention	FALSE	canonical	1	83714	junction_1	199533.21208410917	NA	0	NA	TRUE	NA	NA	NA	B	coding	894	2685	158	2842	5.0	-9368	False	ATTAAA	-30
PB.10526.2	chr7	+	5567	16	novel_not_in_catalog	ZMIZ2	novel	3773	18	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	48038	junction_12	231466.55061926815	NA	2	1	TRUE	NA	NA	NA	B	coding	304	915	711	1625	5.0	0	True	ATTAAA	-17
PB.10526.3	chr7	+	3968	19	novel_not_in_catalog	ZMIZ2	novel	3773	18	NA	NA	-9	0	intron_retention	FALSE	canonical	1	48038	junction_15	232356.37867514585	NA	0	NA	TRUE	NA	NA	NA	B	coding	732	2199	123	2321	5.0	1	True	ATTAAA	-20
PB.11919.11	chr9	-	2044	12	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-3	1	intron_retention	FALSE	canonical	1	74818	junction_3	601590.726970251	NA	0	NA	TRUE	NA	NA	NA	C	coding	378	1137	17	1153	10.0	-1	True	AATAAA	-18
PB.11919.10	chr9	-	2128	11	novel_in_catalog	DPP7	novel	1590	13	NA	NA	-17	1	intron_retention	FALSE	canonical	1	74818	junction_3	552172.2595696836	NA	0	NA	TRUE	NA	NA	NA	C	coding	213	642	596	1237	10.0	-15	True	AATAAA	-18
PB.11919.13	chr9	-	1537	12	novel_not_in_catalog	DPP7	novel	1590	13	NA	NA	-21	0	any annotated donor/acceptor	FALSE	canonical	1	17039	junction_7	607730.4819007673	NA	2	1	TRUE	NA	NA	NA	C	coding	466	1401	35	1435	10.0	-19	True	AATAAA	-17
PB.11919.12	chr9	-	1590	12	novel_not_in_catalog	DPP7	novel	1590	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	11318	junction_8	629369.0512874877	NA	1	NA	TRUE	NA	NA	NA	C	coding	177	534	855	1388	10.0	12	True	AATAAA	-17
PB.7112.2	chr2	+	6049	14	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	-17	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	43856.47032451932	NA	2	1	TRUE	NA	NA	NA	C	coding	795	2388	142	2529	20.0	-38	False	AATAAA	-27
PB.7533.2	chr21	-	7386	2	full-splice_match	ZBTB21	ENST00000398511.3	5608	2	27	-1805	-3	-1	multi-exon	FALSE	canonical	1	60924	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	123	3323	25.0	-7	True	AATAAA	-22
PB.10327.1	chr6	+	3895	2	intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	13164	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	A	coding	100	303	275	577	30.0	-4	True	NA	NA
PB.3151.21	chr13	-	3425	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	34	-2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	1071904.3256549225	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	85	1968	10.0	4	True	AATAAA	-14
PB.692.6	chr1	-	4310	8	full-splice_match	PRKAB2	ENST00000254101.3	5417	8	-26	1133	-20	-1133	multi-exon	FALSE	canonical	1	67870	junction_7	40226.70493133452	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	166	984	15.0	-10	True	ACTAAA	-11
PB.692.1	chr1	-	4956	5	novel_in_catalog	PRKAB2	novel	5417	8	NA	NA	74	-5	no_combination_of_known_junctions	FALSE	canonical	1	4641	junction_3	79999.6782630249	NA	2	NA	TRUE	NA	NA	NA	C	coding	110	333	66	398	40.0	-1	True	AATAAA	-14
PB.3151.25	chr13	-	3694	16	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	46	3	any annotated donor/acceptor	FALSE	canonical	1	156	junction_14	1103701.8756142238	NA	2	1	TRUE	NA	NA	NA	C	coding	570	1713	314	2026	10.0	16	True	AATAAA	-13
PB.692.3	chr1	-	5365	8	full-splice_match	PRKAB2	ENST00000254101.3	5417	8	47	5	47	-5	multi-exon	FALSE	canonical	1	67870	junction_7	40226.70493133452	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	93	911	40.0	-28	True	AATAAA	-14
PB.3151.28	chr13	-	3726	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	36	2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	1328081.7931792627	NA	17	2	TRUE	NA	NA	NA	C	coding	658	1977	83	2059	15.0	6	True	AATAAA	-12
PB.3151.29	chr13	-	3789	17	novel_not_in_catalog	LCP1	novel	3944	19	NA	NA	31	2	any annotated donor/acceptor	FALSE	canonical	1	203	junction_16	1301118.9969017473	NA	0	NA	TRUE	NA	NA	NA	C	coding	627	1884	239	2122	15.0	1	True	AATAAA	-12
PB.11507.6	chr9	-	4136	27	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	24058	junction_21	85895.14477007701	NA	0	NA	TRUE	NA	NA	NA	C	coding	1065	3198	128	3325	5.0	291	False	AATAAA	-15
PB.11507.1	chr9	-	4018	27	novel_in_catalog	UBAP2	novel	2513	13	NA	NA	0	1	no_combination_of_known_junctions	FALSE	canonical	1	8940	junction_17	88369.2769905935	NA	0	NA	TRUE	NA	NA	NA	C	coding	1032	3099	108	3206	10.0	-1	True	AATAAA	-16
PB.11507.2	chr9	-	4275	29	full-splice_match	UBAP2	ENST00000379238.5	4289	29	14	0	0	0	multi-exon	FALSE	canonical	1	179657	junction_28	65871.9369493116	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	108	3464	5.0	-1	True	AATAAA	-15
PB.11507.3	chr9	-	4401	30	novel_not_in_catalog	UBAP2	novel	2513	13	NA	NA	-3	0	any annotated donor/acceptor	FALSE	canonical	1	113	junction_29	100988.5875404728	NA	1	NA	TRUE	NA	NA	NA	C	coding	1118	3357	234	3590	5.0	246	False	AATAAA	-15
PB.9688.2	chr6	-	3013	4	antisense	novelGene_DUSP22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	445	junction_3	14621.717644958439	NA	1	NA	FALSE	NA	NA	NA	B	coding	179	540	383	922	20.0	-1	True	AATAAA	-20
PB.9688.3	chr6	-	2868	3	antisense	novelGene_DUSP22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4496	junction_2	14045.0	NA	0	NA	FALSE	NA	NA	NA	B	coding	179	540	238	777	20.0	875	False	AATAAA	-20
PB.2803.9	chr12	+	3562	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	25	1252	25	-305	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	1	NA	TRUE	NA	NA	NA	C	coding	179	540	406	945	80.0	-4	True	AATAAA	-38
PB.7112.3	chr2	+	4912	14	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	-4	-3	any annotated donor/acceptor	FALSE	canonical	0	0	junction_13	43856.47032451932	NA	4	NA	TRUE	NA	NA	NA	C	coding	795	2388	129	2516	20.0	0	True	AATAAA	-28
PB.2844.1	chr12	+	2139	1	antisense	novelGene_NT5DC3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2803.7	chr12	+	1426	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	12	3401	12	263	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	3	NA	TRUE	NA	NA	NA	C	coding	179	540	419	958	40.0	-728	False	ATTAAA	-28
PB.2803.4	chr12	+	2894	5	full-splice_match	NUDT4	ENST00000415493.6	4839	5	-8	1953	5	-1006	multi-exon	FALSE	canonical	1	109	junction_4	1420.5439979106595	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	439	978	35.0	-748	False	TATAAA	-19
PB.2803.5	chr12	+	4338	4	novel_in_catalog	NUDT4	novel	9753	5	NA	NA	0	-456	no_combination_of_known_junctions	FALSE	canonical	1	87	junction_2	58.20843772360002	NA	5	NA	TRUE	NA	NA	NA	C	coding	165	498	428	925	25.0	-740	False	AATACA	-19
PB.1434.1	chr10	-	2588	10	full-splice_match	PBLD	ENST00000358769.6	2587	10	-1	0	-1	0	multi-exon	FALSE	canonical	1	10153	junction_9	30134.864866848333	NA	1	NA	TRUE	NA	NA	NA	A	coding	288	867	205	1071	25.0	-1	True	NA	NA
PB.5350.1	chr17	+	4323	6	incomplete-splice_match	FOXK2	ENST00000335255.9	5265	9	52007	8	-11053	-8	5prime_fragment	FALSE	canonical	1	317491	junction_2	106018.81650046844	NA	1	NA	TRUE	NA	NA	NA	A	coding	388	1167	57	1223	40.0	8265	False	AATAAA	-17
PB.6811.9	chr2	+	1706	8	novel_not_in_catalog	GCA	novel	814	6	NA	NA	56	-3	any annotated donor/acceptor	FALSE	canonical	1	5324	junction_1	281483.7390197356	NA	1	NA	TRUE	NA	NA	NA	C	coding	198	597	234	830	35.0	7	True	AATAAA	-18
PB.6811.8	chr2	+	4689	7	incomplete-splice_match	GCA	ENST00000437150.6	1992	8	302	303	52	-5	5prime_fragment	FALSE	canonical	1	452574	junction_4	172722.92311837347	NA	3	NA	TRUE	NA	NA	NA	C	coding	198	597	3219	3815	30.0	3	True	AATAAA	-16
PB.6811.7	chr2	+	1665	8	full-splice_match	GCA	ENST00000233612.8	1694	8	27	2	27	-2	multi-exon	FALSE	canonical	1	3310	junction_1	282064.0074878793	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	192	788	40.0	-22	True	AATAAA	-19
PB.6811.6	chr2	+	1678	8	full-splice_match	GCA	ENST00000437150.6	1992	8	13	301	13	-3	multi-exon	FALSE	canonical	1	342922	junction_1	196104.7472292212	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	149	802	35.0	-315	False	AATAAA	-18
PB.6811.5	chr2	+	1993	8	full-splice_match	GCA	ENST00000437150.6	1992	8	3	-4	3	4	multi-exon	FALSE	canonical	1	342922	junction_1	196104.7472292212	NA	0	NA	TRUE	NA	NA	NA	C	coding	217	654	159	812	30.0	-325	False	AATAAA	-22
PB.6811.4	chr2	+	1685	8	novel_in_catalog	GCA	novel	814	6	NA	NA	25	-2	combination_of_known_junctions	FALSE	canonical	1	5683	junction_1	281380.36456899333	NA	4	NA	TRUE	NA	NA	NA	C	coding	243	732	77	808	40.0	21	True	AATAAA	-19
PB.6811.3	chr2	+	2042	9	novel_in_catalog	GCA	novel	814	6	NA	NA	24	-2	combination_of_known_junctions	FALSE	canonical	1	11119	junction_2	320733.3289656056	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	169	867	25.0	20	True	AATAAA	-16
PB.6811.2	chr2	+	1698	9	novel_in_catalog	GCA	novel	814	6	NA	NA	68	-4	combination_of_known_junctions	FALSE	canonical	1	11119	junction_2	320733.3289656056	NA	0	NA	TRUE	NA	NA	NA	C	coding	232	699	125	823	35.0	-14	True	AATAAA	-17
PB.1843.1	chr11	+	1513	1	genic	MRGPRX3	novel	NA	NA	NA	NA	-473	-15946	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	NA	False	NA	NA
PB.1311.9	chr10	-	1656	12	full-splice_match	NMT2	ENST00000378165.8	2907	12	18	1233	18	-805	multi-exon	FALSE	canonical	1	165694	junction_1	32422.124314901223	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	64	1560	40.0	16	True	AATAAA	-11
PB.1311.8	chr10	-	2218	12	full-splice_match	NMT2	ENST00000378165.8	2907	12	-1	690	-1	-262	multi-exon	FALSE	canonical	1	165694	junction_1	32422.124314901223	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	83	1579	20.0	-3	True	AATAAA	-26
PB.7678.2	chr22	+	3732	5	full-splice_match	CCDC117	ENST00000249064.8	3985	5	261	-8	207	2	multi-exon	FALSE	canonical	1	138616	junction_2	90967.9116732241	NA	1	NA	TRUE	NA	NA	NA	C	coding	147	444	312	755	25.0	-609	False	AATAAA	-28
PB.10518.7	chr7	-	2457	10	novel_not_in_catalog	POLM	novel	2444	10	NA	NA	1	0	any annotated donor/acceptor	FALSE	canonical	1	3791	junction_4	54521.05466177354	NA	0	NA	TRUE	NA	NA	NA	C	coding	408	1227	190	1416	20.0	-3	True	AAAACA	-7
PB.10518.6	chr7	-	2511	10	novel_in_catalog	POLM	novel	2444	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	17588	junction_4	52816.38065020789	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1503	197	1699	20.0	-10	True	AAAACA	-7
PB.12119.18	chrX	-	3035	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	4513	junction_2	18718.019399765562	NA	3	NA	TRUE	NA	NA	NA	C	coding	208	627	60	686	30.0	6	True	AATAAA	-14
PB.10518.4	chr7	-	2493	11	full-splice_match	POLM	ENST00000242248.9	2631	11	132	6	56	-3	multi-exon	FALSE	canonical	1	40683	junction_4	36859.95945209382	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	85	1455	25.0	102	False	AAAACA	-4
PB.1311.1	chr10	-	2279	12	novel_in_catalog	NMT2	novel	1227	2	NA	NA	0	396	combination_of_known_junctions	TRUE	canonical	1	29157	junction_1	60703.584497073876	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	82	1569	30.0	-2	True	NA	NA
PB.12119.17	chrX	-	3075	7	novel_not_in_catalog	EDA2R	novel	3418	7	NA	NA	3	0	any annotated donor/acceptor	FALSE	canonical	1	13930	junction_1	16726.156974597867	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	106	726	30.0	-30	True	AATAAA	-14
PB.1311.3	chr10	-	2874	12	full-splice_match	NMT2	ENST00000378165.8	2907	12	-1	34	-1	-34	multi-exon	FALSE	canonical	1	165694	junction_1	32422.124314901223	NA	14	NA	TRUE	NA	NA	NA	C	coding	498	1497	83	1579	20.0	-3	True	NA	NA
PB.1311.2	chr10	-	1847	12	novel_in_catalog	NMT2	novel	1227	2	NA	NA	18	-18	combination_of_known_junctions	FALSE	canonical	1	29157	junction_1	60703.584497073876	NA	1	NA	TRUE	NA	NA	NA	C	coding	495	1488	64	1551	30.0	16	True	AGTAAA	-15
PB.1311.5	chr10	-	2690	12	full-splice_match	NMT2	ENST00000378165.8	2907	12	-25	242	-25	186	multi-exon	FALSE	canonical	1	165694	junction_1	32422.124314901223	NA	1	NA	TRUE	NA	NA	NA	C	coding	498	1497	107	1603	70.0	0	True	NA	NA
PB.1311.4	chr10	-	2935	13	full-splice_match	NMT2	ENST00000378150.1	2457	13	-50	-428	15	0	multi-exon	FALSE	canonical	1	38473	junction_10	70343.73647766295	NA	1	NA	TRUE	NA	NA	NA	C	coding	340	1023	584	1606	20.0	13	True	NA	NA
PB.1311.7	chr10	-	2403	12	full-splice_match	NMT2	ENST00000378165.8	2907	12	3	501	3	-73	multi-exon	FALSE	canonical	1	165694	junction_1	32422.124314901223	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	79	1575	60.0	1	True	NA	NA
PB.1311.6	chr10	-	2569	12	full-splice_match	NMT2	ENST00000378165.8	2907	12	0	338	0	90	multi-exon	FALSE	canonical	1	165694	junction_1	32422.124314901223	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	82	1578	90.0	-2	True	NA	NA
PB.7843.11	chr22	-	6266	10	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	-6	1	intron_retention	FALSE	canonical	1	444039	junction_7	143113.695429047	NA	6	NA	TRUE	NA	NA	NA	C	coding	323	972	209	1180	25.0	15	False	AATAAA	-16
PB.7843.10	chr22	-	3083	10	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	17	-2	no_combination_of_known_junctions	FALSE	canonical	1	38221	junction_9	243010.92767539143	NA	2	NA	TRUE	NA	NA	NA	C	coding	445	1338	162	1499	20.0	-4	True	AATAAA	-17
PB.7843.13	chr22	-	5807	9	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	-17	1	intron_retention	FALSE	canonical	1	444039	junction_6	104537.02263911098	NA	0	NA	TRUE	NA	NA	NA	C	coding	343	1032	173	1204	25.0	-1	True	AATAAA	-16
PB.7843.12	chr22	-	3702	11	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	11	1	any annotated donor/acceptor	FALSE	canonical	1	113	junction_10	240910.40509998734	NA	3	NA	TRUE	NA	NA	NA	C	coding	486	1461	659	2119	25.0	1421	False	AATAAA	-16
PB.7843.15	chr22	-	3399	12	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	-37	1	any annotated donor/acceptor	FALSE	canonical	1	399	junction_10	291282.6528464057	NA	2	NA	TRUE	NA	NA	NA	C	coding	486	1461	356	1816	25.0	-16	False	AATAAA	-16
PB.7843.14	chr22	-	3425	11	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	3824	junction_10	239947.2449402368	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	382	1842	25.0	-2	True	AATAAA	-16
PB.7843.17	chr22	-	3299	11	novel_not_in_catalog	PACSIN2	novel	362	4	NA	NA	-440	1	any annotated donor/acceptor	TRUE	canonical	1	3264	junction_10	240092.50524081336	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	256	1716	25.0	9863	False	AATAAA	-16
PB.7843.16	chr22	-	3382	12	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	1	1053	junction_11	290902.2421907458	NA	1	NA	TRUE	NA	NA	NA	C	coding	486	1461	339	1799	25.0	-6	True	AATAAA	-16
PB.7843.19	chr22	-	3128	10	novel_in_catalog	PACSIN2	novel	362	4	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	96231	junction_2	193751.49272320236	NA	0	NA	TRUE	NA	NA	NA	C	coding	445	1338	208	1545	25.0	16	False	AATAAA	-16
PB.7843.18	chr22	-	3236	11	full-splice_match	PACSIN2	ENST00000402229.5	1883	11	1	-1354	1	1	multi-exon	TRUE	canonical	1	4251	junction_10	239836.50391889887	NA	0	NA	TRUE	NA	NA	NA	C	coding	486	1461	193	1653	25.0	-4	True	AATAAA	-16
PB.7678.5	chr22	+	2522	5	full-splice_match	CCDC117	ENST00000249064.8	3985	5	43	1420	-11	-1420	multi-exon	FALSE	canonical	1	138616	junction_2	90967.9116732241	NA	0	NA	TRUE	NA	NA	NA	C	coding	279	840	134	973	45.0	-28	True	NA	NA
PB.10235.9	chr6	+	4521	9	novel_in_catalog	TNFAIP3	novel	4735	9	NA	NA	50	-6	intron_retention	FALSE	canonical	1	18466	junction_1	236593.92678988905	NA	0	NA	TRUE	NA	NA	NA	C	coding	790	2373	163	2535	35.0	-9852	False	AATAAA	-43
PB.6990.55	chr2	-	8118	45	full-splice_match	FN1	ENST00000359671.5	8524	45	0	406	0	1	multi-exon	FALSE	canonical	1	4033929	junction_14	2289072.3236550093	NA	0	NA	TRUE	NA	NA	NA	C	coding	2386	7161	267	7427	30.0	-1	True	AATAAA	-16
PB.11263.11	chr8	-	3207	2	novel_not_in_catalog	STK3	novel	3107	13	NA	NA	500	-19	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.936.4	chr1	-	1308	2	full-splice_match	PIGC	ENST00000344529.4	1447	2	-9	148	-9	-148	multi-exon	FALSE	canonical	1	188583	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	291	1184	70.0	-1	True	AATAGA	-8
PB.5502.11	chr18	+	4116	2	incomplete-splice_match	PMAIP1	ENST00000269518.9	1262	3	-18	-768	-18	-1	intron_retention	FALSE	canonical	1	9046	junction_1	0.0	NA	12	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	2	True	ATTAAA	-14
PB.5502.10	chr18	+	1843	2	novel_not_in_catalog	PMAIP1	novel	1948	2	NA	NA	-20	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	16	NA	FALSE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	0	True	ATTAAA	-14
PB.936.1	chr1	-	1465	2	full-splice_match	PIGC	ENST00000344529.4	1447	2	-16	-2	7	2	multi-exon	FALSE	canonical	1	188583	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	298	1191	20.0	-8	True	ATTAAA	-18
PB.936.2	chr1	-	2619	1	full-splice_match	PIGC	ENST00000367728.1	2630	1	10	1	7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	297	894	1455	2348	25.0	-8	True	ATTAAA	-15
PB.2425.1	chr12	+	1160	5	full-splice_match	PTMS	ENST00000619580.4	1150	5	-12	2	-12	-2	multi-exon	FALSE	canonical	1	2845428	junction_1	1218025.8620097882	NA	1	NA	TRUE	NA	NA	NA	A	coding	102	309	344	652	10.0	0	True	AATAAA	-24
PB.465.15	chr1	-	4036	8	full-splice_match	SERBP1	ENST00000370994.8	6676	8	15	2625	-1	603	multi-exon	FALSE	canonical	1	2863	junction_5	420864.44566542486	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	101	1264	30.0	1	True	AATAAA	-16
PB.6758.5	chr2	-	2379	16	incomplete-splice_match	MCM6	ENST00000264156.2	3736	17	-18	4968	-18	14	3prime_fragment	FALSE	canonical	1	470774	junction_13	106920.41682227436	NA	0	NA	TRUE	NA	NA	NA	C	coding	766	2298	80	2377	70.0	-2	True	NA	NA
PB.465.16	chr1	-	4068	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	-17	-1948	-1	601	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	117	1298	30.0	1	True	AATAAA	-14
PB.465.11	chr1	-	5147	8	full-splice_match	SERBP1	ENST00000361219.10	2103	8	-2	-3042	-2	-1533	multi-exon	FALSE	canonical	1	1067	junction_5	421126.6586895933	NA	0	NA	TRUE	NA	NA	NA	C	coding	393	1182	102	1283	80.0	0	True	NA	NA
PB.465.10	chr1	-	5159	8	full-splice_match	SERBP1	ENST00000370990.5	1621	8	-14	-3524	0	-1533	multi-exon	FALSE	canonical	1	2863	junction_5	414264.5743126102	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	87	1295	80.0	31	False	NA	NA
PB.7530.8	chr21	-	3564	7	novel_in_catalog	RIPK4	novel	4016	9	NA	NA	10	-6	intron_retention	FALSE	canonical	1	1924	junction_6	31399.70466244689	NA	3	NA	TRUE	NA	NA	NA	C	coding	679	2040	62	2101	20.0	-1	True	AATAAA	-25
PB.7530.9	chr21	-	3414	9	novel_not_in_catalog	RIPK4	novel	4016	9	NA	NA	10	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	29677.341836565738	NA	6	NA	TRUE	NA	NA	NA	C	coding	582	1749	39	1787	20.0	-1	True	AATAAA	-20
PB.7530.6	chr21	-	3707	7	novel_in_catalog	RIPK4	novel	4016	9	NA	NA	15	-1	intron_retention	FALSE	canonical	1	427	junction_5	32446.250372303766	NA	2	NA	TRUE	NA	NA	NA	C	coding	552	1659	581	2239	10.0	4	True	AATAAA	-30
PB.10809.1	chr7	+	5574	29	novel_not_in_catalog	PTPRZ1	novel	8175	30	NA	NA	16	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	100399.45867444928	NA	4	1	TRUE	NA	NA	NA	C	coding	1454	4365	396	4760	15.0	-380	False	AATAAA	-17
PB.10809.2	chr7	+	5557	29	full-splice_match	PTPRZ1	ENST00000449182.1	4627	29	-256	-674	16	-1	multi-exon	FALSE	canonical	1	58584	junction_12	96200.63254838393	NA	1	NA	TRUE	NA	NA	NA	C	coding	1448	4347	396	4742	10.0	-380	False	AATAAA	-18
PB.7530.5	chr21	-	3993	8	full-splice_match	RIPK4	ENST00000332512.7	3889	8	-110	6	-110	-6	multi-exon	FALSE	canonical	1	70930	junction_2	11652.058269609166	NA	1	NA	TRUE	NA	NA	NA	C	coding	784	2355	176	2530	20.0	-138	False	AATAAA	-25
PB.7530.2	chr21	-	5761	7	novel_in_catalog	RIPK4	novel	4016	9	NA	NA	-5	0	intron_retention	FALSE	canonical	1	70930	junction_1	12008.001341698053	NA	1	NA	TRUE	NA	NA	NA	C	coding	419	1260	3033	4292	15.0	-16	True	AATAAA	-31
PB.10809.5	chr7	+	6782	30	novel_not_in_catalog	PTPRZ1	novel	8175	30	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	1	3214	junction_12	98934.1201683661	NA	3	NA	TRUE	NA	NA	NA	C	coding	1088	3267	2702	5968	15.0	0	True	AATAAA	-17
PB.7112.6	chr2	+	4029	28	novel_not_in_catalog	FARP2	novel	4051	27	NA	NA	-4	0	intron_retention	TRUE	canonical	1	2066	junction_22	48973.10575039637	NA	1	NA	TRUE	NA	NA	NA	C	coding	1061	3186	129	3314	10.0	0	True	AATAAA	-17
PB.7533.6	chr21	-	5585	2	full-splice_match	ZBTB21	ENST00000398511.3	5608	2	28	-5	-2	5	multi-exon	FALSE	canonical	1	60924	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	1066	3201	122	3322	10.0	-6	True	AATAAA	-23
PB.8374.1	chr3	+	1975	12	full-splice_match	ABTB1	ENST00000475042.5	1915	12	-55	-5	-32	5	multi-exon	FALSE	canonical	1	150210	junction_2	123369.72439228394	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	164	1525	15.0	-3406	False	AATAAA	-25
PB.8374.3	chr3	+	2029	11	novel_in_catalog	ABTB1	novel	1027	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	238466	junction_1	111905.11854446158	NA	11	1	TRUE	NA	NA	NA	C	coding	238	717	871	1587	15.0	4	True	AATAAA	-17
PB.8374.2	chr3	+	1961	12	full-splice_match	ABTB1	ENST00000232744.12	1965	12	12	-8	0	5	multi-exon	FALSE	canonical	1	238466	junction_1	107845.53529351042	NA	1	NA	TRUE	NA	NA	NA	C	coding	478	1437	75	1511	15.0	-4	True	AATAAA	-25
PB.6758.1	chr2	-	3776	17	full-splice_match	MCM6	ENST00000264156.2	3736	17	-28	-12	-28	12	multi-exon	FALSE	canonical	1	470774	junction_14	104907.77750302882	NA	0	NA	TRUE	NA	NA	NA	C	coding	821	2466	90	2555	30.0	7	False	AATAAA	-32
PB.9686.3	chr5	-	3203	2	novel_not_in_catalog	TRIM52	novel	763	2	NA	NA	-10	-7	any annotated donor/acceptor	FALSE	canonical	1	5187	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	277	834	316	1149	35.0	14	True	AATAAA	-13
PB.11145.3	chr8	+	2054	9	full-splice_match	SDCBP	ENST00000447182.6	2103	9	45	4	0	-4	multi-exon	FALSE	canonical	1	224721	junction_4	354111.40522793104	NA	11	NA	TRUE	NA	NA	NA	C	coding	297	894	59	952	20.0	0	True	AATAAA	-3
PB.1588.4	chr10	-	1604	9	full-splice_match	GOT1	ENST00000370508.6	2923	9	905	414	-40	181	multi-exon	FALSE	canonical	1	598743	junction_8	170517.56398004136	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	100	1341	15.0	608	False	AATAAA	-22
PB.467.19	chr1	-	3323	4	full-splice_match	GNG12	ENST00000370982.3	4404	4	78	1003	47	-1003	multi-exon	FALSE	canonical	1	161296	junction_3	234357.46866319882	NA	5	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	1	True	TTTAAA	-9
PB.467.18	chr1	-	4000	4	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1325	-573	any annotated donor/acceptor	FALSE	canonical	1	29156	junction_3	295486.92491922923	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	23	True	NA	NA
PB.1588.1	chr10	-	1980	9	novel_not_in_catalog	GOT1	novel	2923	9	NA	NA	-211	-4	any annotated donor/acceptor	FALSE	canonical	1	4321	junction_8	347431.5410771595	NA	0	NA	TRUE	NA	NA	NA	C	coding	201	606	702	1307	35.0	437	False	NA	NA
PB.1588.3	chr10	-	1765	9	full-splice_match	GOT1	ENST00000370508.6	2923	9	913	245	-32	-245	multi-exon	FALSE	canonical	1	598743	junction_8	170517.56398004136	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	92	1333	10.0	616	False	ATTAAA	-17
PB.1588.2	chr10	-	1957	9	full-splice_match	GOT1	ENST00000370508.6	2923	9	936	30	-9	-30	multi-exon	FALSE	canonical	1	598743	junction_8	170517.56398004136	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	69	1310	80.0	-10	True	NA	NA
PB.7788.1	chr22	+	2196	4	full-splice_match	APOBEC3D	ENST00000427494.6	1961	4	-253	18	-253	-18	multi-exon	FALSE	canonical	1	19006	junction_2	30732.476007564954	NA	4	NA	TRUE	NA	NA	NA	C	coding	202	609	661	1269	45.0	-267	False	AATAAA	-12
PB.467.12	chr1	-	4464	5	novel_not_in_catalog	GNG12	novel	4404	4	NA	NA	1455	-74	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	253215.72459614353	NA	22	3	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-7	True	ATTAAA	-18
PB.7788.3	chr22	+	2084	5	novel_in_catalog	AL022318.4	novel	2121	7	NA	NA	6777	-22	no_combination_of_known_junctions	FALSE	canonical	1	9293	junction_2	29846.207171096295	NA	4	NA	TRUE	NA	NA	NA	B	coding	179	540	607	1146	50.0	13	False	AATAAA	-23
PB.7788.2	chr22	+	2195	7	full-splice_match	APOBEC3D	ENST00000216099.12	2528	7	301	32	-88	-17	multi-exon	FALSE	canonical	1	44737	junction_2	16664.60962055684	NA	2	NA	TRUE	NA	NA	NA	C	coding	386	1161	107	1267	45.0	287	False	AATAAA	-13
PB.467.17	chr1	-	4203	4	full-splice_match	GNG12	ENST00000370982.3	4404	4	-49	250	-49	-250	multi-exon	FALSE	canonical	1	161296	junction_3	234357.46866319882	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	283	False	AGTAAA	-25
PB.7788.4	chr22	+	2204	6	novel_in_catalog	AL022318.4	novel	2121	7	NA	NA	6788	-6	no_combination_of_known_junctions	FALSE	canonical	1	5158	junction_2	28852.478835621736	NA	3	NA	TRUE	NA	NA	NA	B	coding	206	621	630	1250	50.0	24	False	AATAAA	-39
PB.10647.2	chr7	+	3054	18	full-splice_match	CROT	ENST00000331536.7	3175	18	-39	160	-25	154	multi-exon	FALSE	canonical	1	71076	junction_4	15681.240180282155	NA	2	NA	TRUE	NA	NA	NA	C	coding	612	1839	225	2063	30.0	-77	False	AATAAA	-13
PB.10647.3	chr7	+	3207	18	full-splice_match	CROT	ENST00000331536.7	3175	18	-31	-1	-17	1	multi-exon	FALSE	canonical	1	71076	junction_4	15681.240180282155	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	217	2055	5.0	0	True	AATAAA	-19
PB.11652.1	chr9	+	1410	5	novel_not_in_catalog	SUSD3	novel	1076	4	NA	NA	-9	0	any annotated donor/acceptor	FALSE	canonical	1	4453	junction_1	73474.52500484437	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	210	1025	40.0	-3	True	AATAAA	-38
PB.11098.40	chr8	+	3333	6	incomplete-splice_match	TACC1	ENST00000520973.5	2564	13	50362	-2499	-816	0	5prime_fragment	FALSE	canonical	1	487832	junction_4	57534.72037439654	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	75	581	100.0	8649	False	NA	NA
PB.11098.41	chr8	+	3082	4	incomplete-splice_match	TACC1	ENST00000519093.5	6447	5	3131	2253	2364	0	5prime_fragment	FALSE	canonical	1	487832	junction_2	71597.36076296543	NA	3	NA	TRUE	NA	NA	NA	C	coding	35	108	223	330	100.0	-6563	False	NA	NA
PB.3304.5	chr14	-	2407	9	novel_not_in_catalog	RAB2B	novel	2928	8	NA	NA	-18	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	111388.22680263105	NA	1	1	TRUE	NA	NA	NA	B	coding	216	651	120	770	25.0	-58	False	ATTAAA	-17
PB.3304.4	chr14	-	2191	8	novel_not_in_catalog	RAB2B	novel	2928	8	NA	NA	-14	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	136992.98106196863	NA	3	NA	TRUE	NA	NA	NA	B	coding	151	456	194	649	25.0	-39	True	ATTAAA	-20
PB.3343.1	chr14	+	3506	21	full-splice_match	RNF31	ENST00000324103.10	3627	21	120	1	-1	0	multi-exon	TRUE	canonical	1	260499	junction_8	65757.21734425811	NA	0	NA	TRUE	NA	NA	NA	C	coding	1072	3219	201	3419	0.0	-1	True	AATAAA	-20
PB.3304.1	chr14	-	2314	9	novel_not_in_catalog	RAB2B	novel	2928	8	NA	NA	-13	5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	111388.22680263105	NA	0	NA	TRUE	NA	NA	NA	B	coding	216	651	115	765	25.0	-53	False	ATTAAA	-27
PB.8387.12	chr3	-	1735	4	full-splice_match	CNBP	ENST00000502372.1	1026	4	-46	-663	0	0	multi-exon	FALSE	canonical	1	2462385	junction_2	1348891.6951047874	NA	9	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	11	False	AATAAA	-27
PB.3304.3	chr14	-	2233	9	novel_not_in_catalog	RAB2B	novel	2928	8	NA	NA	3	3	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	111388.22680263105	NA	0	NA	TRUE	NA	NA	NA	B	coding	216	651	84	734	20.0	-22	True	ATTAAA	-25
PB.8387.10	chr3	-	1893	3	novel_in_catalog	CNBP	novel	1626	5	NA	NA	3	-2	intron_retention	FALSE	canonical	1	2610703	junction_2	1392194.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	2	True	ATTAAA	-19
PB.11652.2	chr9	+	1179	5	full-splice_match	SUSD3	ENST00000375472.7	1195	5	12	4	12	1	multi-exon	FALSE	canonical	1	40793	junction_1	58410.637448905654	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	25	792	35.0	18	True	AATAAA	-40
PB.3087.5	chr13	-	1940	7	novel_not_in_catalog	LINC00426	novel	1589	5	NA	NA	-47	713	any annotated donor/acceptor	FALSE	canonical	1	1812	junction_3	7638.669968580191	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	10.0	-1	True	NA	NA
PB.3087.4	chr13	-	1756	5	novel_in_catalog	LINC00426	novel	1589	5	NA	NA	-27	-3	combination_of_known_junctions	FALSE	canonical	1	4676	junction_2	1871.7615366279967	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	3297	False	NA	NA
PB.10449.15	chr7	-	2609	13	novel_not_in_catalog	HNRNPA2B1	novel	3497	11	NA	NA	-6	-2	any annotated donor/acceptor	FALSE	canonical	1	104464	junction_2	5108520.311826433	NA	0	NA	TRUE	NA	NA	NA	C	coding	341	1026	176	1201	30.0	-7	True	AATAAA	-16
PB.3087.1	chr13	-	1580	3	novel_in_catalog	LINC00426	novel	1589	5	NA	NA	-28	3	no_combination_of_known_junctions	FALSE	canonical	1	2805	junction_1	2575.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	3296	False	NA	NA
PB.3087.3	chr13	-	1659	4	novel_in_catalog	LINC00426	novel	1589	5	NA	NA	-41	3	combination_of_known_junctions	FALSE	canonical	1	7955	junction_3	25.315783394730033	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	3283	False	NA	NA
PB.3087.2	chr13	-	2095	4	novel_in_catalog	LINC00426	novel	1589	5	NA	NA	-46	3	no_combination_of_known_junctions	FALSE	canonical	1	2805	junction_1	7640.9532709531	NA	3	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	0	True	NA	NA
PB.3196.1	chr13	-	1772	1	novel_in_catalog	COMMD6	novel	1793	5	NA	NA	0	-5956	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-1	True	NA	NA
PB.5437.10	chr18	-	4266	7	novel_not_in_catalog	B4GALT6	novel	4427	5	NA	NA	12191	-4	any annotated donor/acceptor	FALSE	canonical	1	257	junction_6	50725.43919447344	NA	1	NA	TRUE	NA	NA	NA	C	coding	274	825	79	903	35.0	NA	False	AATATA	-8
PB.2985.10	chr12	+	2793	22	incomplete-splice_match	KNTC1	ENST00000333479.11	6975	64	66782	6	117	-6	5prime_fragment	FALSE	canonical	1	154197	junction_1	48864.381509199964	NA	0	NA	TRUE	NA	NA	NA	B	coding	768	2307	325	2631	40.0	8457	False	AATAAA	-29
PB.7282.1	chr20	-	2020	2	full-splice_match	BLCAP	ENST00000649668.1	2017	2	-4	1	-1	0	multi-exon	FALSE	canonical	1	586653	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	-5	True	AATAAA	-15
PB.5437.15	chr18	-	4722	8	full-splice_match	B4GALT6	ENST00000383131.3	1239	8	-250	-3233	-31	-5	multi-exon	FALSE	canonical	1	2408	junction_4	45997.425255360205	NA	2	1	TRUE	NA	NA	NA	C	coding	343	1032	329	1360	35.0	741	False	AATATA	-7
PB.6363.3	chr2	-	2870	20	full-splice_match	HADHA	ENST00000380649.7	3037	20	-68	235	-68	11	multi-exon	FALSE	canonical	1	429272	junction_7	396280.2990494554	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	199	2490	10.0	-100	False	AATAAA	-20
PB.4099.1	chr15	+	4077	8	full-splice_match	ARRDC4	ENST00000268042.6	4072	8	-7	2	-7	-2	multi-exon	FALSE	canonical	1	67129	junction_1	46039.37745239483	NA	1	NA	TRUE	NA	NA	NA	A	coding	418	1257	172	1428	15.0	-265	False	AATAAA	-17
PB.11243.3	chr8	+	4102	18	novel_in_catalog	DPY19L4	novel	680	4	NA	NA	3	-1992	combination_of_known_junctions	FALSE	canonical	1	17409	junction_2	44875.278316377255	NA	0	NA	TRUE	NA	NA	NA	C	coding	618	1857	312	2168	40.0	-22	True	AATAAA	-21
PB.7212.2	chr20	-	2563	1	intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	123	372	395	766	40.0	-4	True	NA	NA
PB.7303.2	chr20	-	2006	3	novel_in_catalog	OSER1	novel	1616	6	NA	NA	5	553	no_combination_of_known_junctions	FALSE	canonical	1	25780	junction_1	272085.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	254	765	133	897	20.0	-16	True	AATACA	-16
PB.7303.3	chr20	-	1578	4	full-splice_match	OSER1	ENST00000255174.2	1572	4	-6	0	-6	0	multi-exon	FALSE	canonical	1	569951	junction_3	20299.95435681787	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	144	1022	30.0	-27	True	AATAAA	-20
PB.29.4	chr1	-	3584	5	novel_not_in_catalog	AL031282.2	novel	5079	20	NA	NA	-8111	-32299	intron_retention	FALSE	canonical	1	17232	junction_1	21499.998377906915	NA	1	NA	TRUE	NA	NA	NA	B	coding	199	600	224	823	80.0	270	False	NA	NA
PB.7303.1	chr20	-	2103	4	full-splice_match	OSER1	ENST00000255174.2	1572	4	22	-553	22	553	multi-exon	FALSE	canonical	1	569951	junction_3	20299.95435681787	NA	13	NA	TRUE	NA	NA	NA	C	coding	292	879	116	994	20.0	1	True	AATACA	-16
PB.7303.6	chr20	-	4410	4	incomplete-splice_match	OSER1	ENST00000372970.6	1616	6	-554	412	161	-412	intron_retention	FALSE	canonical	1	9415	junction_3	281775.7789405533	NA	5	NA	TRUE	NA	NA	NA	C	coding	292	879	3388	4266	25.0	1199	False	AATAAA	-19
PB.29.3	chr1	-	4089	4	incomplete-splice_match	SLC35E2A	ENST00000246421.4	1430	6	199	2793	126	-345	3prime_fragment	FALSE	canonical	1	25005	junction_3	20309.171267079204	NA	2	NA	TRUE	NA	NA	NA	A	coding	300	903	218	1120	80.0	276	False	NA	NA
PB.7303.4	chr20	-	1174	4	full-splice_match	OSER1	ENST00000255174.2	1572	4	-11	409	-11	-409	multi-exon	FALSE	canonical	1	569951	junction_3	20299.95435681787	NA	0	NA	TRUE	NA	NA	NA	C	coding	292	879	149	1027	25.0	-32	True	AATAAA	-22
PB.7303.5	chr20	-	4687	3	incomplete-splice_match	OSER1	ENST00000255174.2	1572	4	170	412	170	-412	5prime_fragment	FALSE	canonical	1	593802	junction_1	12930.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	292	879	3665	4543	25.0	-7	True	AATAAA	-19
PB.5605.3	chr19	+	3794	3	incomplete-splice_match	GNA15	ENST00000262958.3	2133	7	-79	10512	-79	1435	intron_retention	FALSE	canonical	1	312463	junction_2	17338.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	161	486	338	823	90.0	-128	False	NA	NA
PB.5605.2	chr19	+	1967	7	novel_not_in_catalog	GNA15	novel	2133	7	NA	NA	-158	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	142221.82118749883	NA	0	NA	TRUE	NA	NA	NA	C	coding	335	1008	417	1424	10.0	2	True	ATTAAA	-34
PB.5605.1	chr19	+	2069	7	full-splice_match	GNA15	ENST00000262958.3	2133	7	48	16	48	-16	multi-exon	FALSE	canonical	1	312463	junction_2	40864.463264417034	NA	0	NA	TRUE	NA	NA	NA	C	coding	374	1125	211	1335	10.0	-1	True	ATTAAA	-21
PB.6850.1	chr2	-	3893	7	novel_not_in_catalog	WIPF1	novel	4587	8	NA	NA	17	7	intron_retention	FALSE	non_canonical	0	0	junction_4	273301.28266479506	NA	2	1	TRUE	NA	NA	NA	C	coding	118	357	715	1071	15.0	41	False	AATAAA	-24
PB.10710.4	chr7	-	2554	6	full-splice_match	TRIM4	ENST00000349062.6	3374	6	33	787	33	-787	multi-exon	FALSE	canonical	1	231477	junction_5	53402.74102927676	NA	0	NA	TRUE	NA	NA	NA	C	coding	474	1425	167	1591	35.0	28	False	NA	NA
PB.9939.7	chr6	-	1680	1	incomplete-splice_match	C6orf106	ENST00000374023.7	4418	5	107873	7	82982	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	130	393	398	790	40.0	NA	False	ATTAAA	-15
PB.9939.1	chr6	-	4299	5	full-splice_match	C6orf106	ENST00000374023.7	4418	5	110	9	110	-9	multi-exon	FALSE	canonical	1	306420	junction_2	86969.57513801882	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	135	1031	40.0	29	True	ATTAAA	-13
PB.9939.3	chr6	-	4171	5	full-splice_match	C6orf106	ENST00000374021.1	916	5	-41	-3214	-41	-7	multi-exon	FALSE	canonical	1	5675	junction_4	191774.83259460167	NA	2	NA	TRUE	NA	NA	NA	C	coding	224	675	227	901	40.0	-1	True	ATTAAA	-15
PB.9939.2	chr6	-	4293	6	novel_not_in_catalog	C6orf106	novel	4418	5	NA	NA	-41	-7	any annotated donor/acceptor	FALSE	canonical	1	5675	junction_5	213250.99665192657	NA	1	NA	TRUE	NA	NA	NA	C	coding	171	516	508	1023	40.0	-1	True	ATTAAA	-15
PB.6736.10	chr2	+	6446	40	novel_in_catalog	UGGT1	novel	586	5	NA	NA	-19	-28	combination_of_known_junctions	FALSE	canonical	1	38885	junction_1	107850.59096350311	NA	0	NA	TRUE	NA	NA	NA	C	coding	1536	4611	178	4788	85.0	-19	True	NA	NA
PB.9939.8	chr6	-	1972	5	full-splice_match	C6orf106	ENST00000374023.7	4418	5	12	2434	12	787	multi-exon	FALSE	canonical	1	306420	junction_2	86969.57513801882	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	233	1129	40.0	24	True	ATTAAA	-28
PB.7548.7	chr21	+	2887	12	incomplete-splice_match	RRP1	ENST00000497547.1	3022	13	64	1195	0	-1195	intron_retention	FALSE	canonical	1	310705	junction_11	104351.1478085348	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	54	1268	20.0	0	True	AATAAA	-20
PB.7548.6	chr21	+	1769	13	full-splice_match	RRP1	ENST00000497547.1	3022	13	62	1191	-2	-1191	multi-exon	FALSE	canonical	1	310705	junction_11	103078.78480193223	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	56	1441	15.0	-2	True	AATAAA	-24
PB.7548.5	chr21	+	2961	13	full-splice_match	RRP1	ENST00000497547.1	3022	13	44	17	-2	-17	multi-exon	FALSE	canonical	1	310705	junction_11	103078.78480193223	NA	2	NA	TRUE	NA	NA	NA	C	coding	461	1386	74	1459	90.0	-20	True	NA	NA
PB.7548.4	chr21	+	1911	13	full-splice_match	RRP1	ENST00000497547.1	3022	13	43	1068	-3	-1068	multi-exon	FALSE	canonical	1	310705	junction_11	103078.78480193223	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	75	1460	30.0	-21	True	NA	NA
PB.7548.3	chr21	+	3499	11	novel_in_catalog	RRP1	novel	588	6	NA	NA	-5	-1195	intron_retention	FALSE	canonical	1	310705	junction_10	106946.82825759724	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	972	1880	20.0	-23	True	AATAAA	-20
PB.7548.2	chr21	+	2809	13	full-splice_match	RRP1	ENST00000497547.1	3022	13	35	178	-11	-178	multi-exon	FALSE	canonical	1	310705	junction_11	103078.78480193223	NA	1	NA	TRUE	NA	NA	NA	C	coding	461	1386	83	1468	55.0	-29	True	NA	NA
PB.7548.1	chr21	+	2390	12	novel_in_catalog	RRP1	novel	588	6	NA	NA	-21	-1196	intron_retention	FALSE	canonical	1	310705	junction_10	104841.62012497589	NA	0	NA	TRUE	NA	NA	NA	C	coding	359	1080	988	2067	20.0	-39	True	AATAAA	-19
PB.9904.1	chr6	-	1097	6	full-splice_match	PSMB8	ENST00000374882.7	1124	6	23	4	-4	-4	multi-exon	FALSE	canonical	1	1034243	junction_5	321058.12873845757	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	170	859	15.0	22	True	AATAAA	-15
PB.4085.6	chr15	+	2113	7	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	2	-3	intron_retention	FALSE	canonical	1	53419	junction_1	64389.3283023066	NA	5	NA	TRUE	NA	NA	NA	C	coding	165	498	1046	1543	20.0	-17	True	NA	NA
PB.4085.7	chr15	+	1907	8	full-splice_match	RCCD1	ENST00000394258.6	2689	8	3	779	3	4	multi-exon	FALSE	canonical	1	53419	junction_1	70803.40493369004	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	200	1330	15.0	-16	True	NA	NA
PB.4085.4	chr15	+	1877	9	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	-7	0	intron_retention	FALSE	canonical	1	22967	junction_1	85727.1031905167	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	294	1424	5.0	-26	True	NA	NA
PB.4085.5	chr15	+	2685	6	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	0	4	intron_retention	FALSE	canonical	1	53419	junction_1	70381.8601516044	NA	0	NA	TRUE	NA	NA	NA	C	coding	117	354	1048	1401	15.0	-19	True	NA	NA
PB.4085.2	chr15	+	2696	8	full-splice_match	RCCD1	ENST00000394258.6	2689	8	-9	2	-9	-2	multi-exon	FALSE	canonical	1	53419	junction_1	70803.40493369004	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	212	1342	40.0	-28	True	NA	NA
PB.4085.3	chr15	+	3216	5	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	-7	2	intron_retention	FALSE	canonical	1	53419	junction_1	73925.44005110825	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	1055	1579	15.0	-26	True	NA	NA
PB.6429.8	chr2	-	4326	24	full-splice_match	DHX57	ENST00000457308.5	4859	24	-24	557	2	-6	multi-exon	FALSE	canonical	1	64480	junction_23	54914.92021688842	NA	0	NA	TRUE	NA	NA	NA	C	coding	1386	4161	153	4313	20.0	-15	True	AATAAA	-13
PB.4085.1	chr15	+	2029	7	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	-30	1	intron_retention	FALSE	canonical	1	53419	junction_1	64389.3283023066	NA	0	NA	TRUE	NA	NA	NA	C	coding	165	498	1078	1575	5.0	-2061	False	NA	NA
PB.9944.1	chr6	+	2909	15	novel_not_in_catalog	ZNF76	novel	1476	5	NA	NA	10	0	any annotated donor/acceptor	TRUE	canonical	1	172	junction_9	109505.07323698641	NA	3	1	TRUE	NA	NA	NA	C	coding	582	1749	317	2065	10.0	-25	True	AATAAA	-14
PB.6429.7	chr2	-	4644	24	full-splice_match	DHX57	ENST00000457308.5	4859	24	-26	241	0	-2	multi-exon	FALSE	canonical	1	64480	junction_23	54914.92021688842	NA	0	NA	TRUE	NA	NA	NA	C	coding	1386	4161	155	4315	10.0	-17	True	AATACA	-19
PB.9944.3	chr6	+	4684	11	novel_in_catalog	ZNF76	novel	1476	5	NA	NA	-9	1	intron_retention	FALSE	canonical	1	78998	junction_1	65309.569566871294	NA	2	NA	TRUE	NA	NA	NA	C	coding	333	1002	306	1307	10.0	-14	True	AATAAA	-15
PB.9944.2	chr6	+	2762	14	novel_in_catalog	ZNF76	novel	1476	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	78998	junction_1	66506.335615622	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	315	2027	10.0	-23	True	AATAAA	-14
PB.7177.11	chr20	-	2881	4	novel_not_in_catalog	ESF1	novel	3216	14	NA	NA	-20	-45096	any annotated donor/acceptor	FALSE	canonical	1	72550	junction_3	90076.06714450971	NA	2	NA	TRUE	NA	NA	NA	B	coding	391	1176	71	1246	80.0	-1	True	NA	NA
PB.1887.12	chr11	+	2334	16	incomplete-splice_match	NAT10	ENST00000257829.7	4002	29	25865	7	-7405	0	5prime_fragment	FALSE	canonical	1	393042	junction_8	160087.5908599206	NA	6	1	TRUE	NA	NA	NA	C	coding	496	1491	133	1623	30.0	3937	False	AATAAA	-12
PB.4085.8	chr15	+	1757	9	novel_in_catalog	RCCD1	novel	2689	8	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	1	12691	junction_8	84060.41396482354	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	198	1328	15.0	-14	True	NA	NA
PB.4085.9	chr15	+	2462	7	incomplete-splice_match	RCCD1	ENST00000394258.6	2689	8	12	778	1	5	intron_retention	FALSE	canonical	1	53419	junction_1	75672.7031424733	NA	2	NA	TRUE	NA	NA	NA	C	coding	328	987	191	1177	15.0	-7	True	NA	NA
PB.8497.8	chr3	+	3406	21	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	333	3146	-1	-627	3prime_fragment	FALSE	canonical	1	293192	junction_1	198897.2346951058	NA	0	NA	TRUE	NA	NA	NA	C	coding	1096	3288	119	3406	60.0	-13	True	AATGAA	-29
PB.8902.2	chr4	+	3840	24	full-splice_match	NFKB1	ENST00000394820.8	3693	24	236	-383	95	-4	multi-exon	FALSE	canonical	1	148941	junction_1	151821.31099875257	NA	1	NA	TRUE	NA	NA	NA	C	coding	968	2907	230	3136	10.0	-9546	False	AATAAA	-21
PB.8902.3	chr4	+	3543	24	full-splice_match	NFKB1	ENST00000226574.8	4085	24	338	204	195	0	multi-exon	FALSE	canonical	1	148941	junction_1	154083.9139019455	NA	0	NA	TRUE	NA	NA	NA	C	coding	969	2910	130	3039	100.0	-9446	False	AAAAAG	-41
PB.11029.1	chr8	+	2469	3	novel_not_in_catalog	AC055854.1	novel	570	5	NA	NA	-25233	9533	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	2830.5	NA	15	1	TRUE	NA	NA	NA	B	coding	168	507	587	1093	25.0	-108	False	NA	NA
PB.8452.1	chr3	-	3531	19	full-splice_match	PLOD2	ENST00000360060.7	3665	19	115	19	-60	-19	multi-exon	FALSE	canonical	1	187701	junction_6	153234.26431404718	NA	0	NA	TRUE	NA	NA	NA	C	coding	737	2214	64	2277	65.0	-44	True	NA	NA
PB.11029.2	chr8	+	2097	3	novel_not_in_catalog	AC055854.1	novel	570	5	NA	NA	-25228	9166	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	2830.5	NA	16	1	TRUE	NA	NA	NA	B	coding	168	507	582	1088	35.0	-3	True	NA	NA
PB.10679.1	chr7	+	3629	18	full-splice_match	CASD1	ENST00000297273.8	3942	18	261	52	-9	1	multi-exon	TRUE	canonical	1	74006	junction_1	37019.82830086609	NA	0	NA	TRUE	NA	NA	NA	A	coding	797	2394	27	2420	30.0	-1	True	AATAAA	-17
PB.8497.3	chr3	+	4367	20	novel_not_in_catalog	SMC4	novel	708	6	NA	NA	-8	-11	any annotated donor/acceptor	FALSE	canonical	1	6223	junction_1	231962.25659903215	NA	0	NA	TRUE	NA	NA	NA	C	coding	1051	3156	79	3234	60.0	-4833	False	AATAAA	-6
PB.1151.1	chr1	+	1590	5	full-splice_match	CNIH4	ENST00000465271.5	4125	5	-34	2569	-34	-1	multi-exon	FALSE	canonical	1	803480	junction_2	156797.9272128621	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	110	529	20.0	5	True	AATAAA	-18
PB.8497.2	chr3	+	1186	8	incomplete-splice_match	SMC4	ENST00000357388.7	5471	24	346	21389	0	-10	3prime_fragment	FALSE	canonical	1	293192	junction_1	186888.0233002137	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1080	106	1185	65.0	0	True	AATATA	-11
PB.4819.9	chr17	+	1760	10	full-splice_match	PRPSAP2	ENST00000536323.5	1872	10	94	18	-1	1	multi-exon	FALSE	canonical	1	22543	junction_1	176108.5565023271	NA	0	NA	TRUE	NA	NA	NA	C	coding	283	852	338	1189	30.0	31	True	AATAAA	-18
PB.70.1	chr1	-	2886	5	novel_not_in_catalog	GPR157	novel	5265	4	NA	NA	4	-2	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	20233.674320300797	NA	1	NA	TRUE	NA	NA	NA	B	coding	335	1008	140	1147	25.0	28	False	AATAAA	-17
PB.4819.8	chr17	+	3462	11	incomplete-splice_match	PRPSAP2	ENST00000268835.6	1910	12	26	4	2	-4	intron_retention	FALSE	canonical	1	54007	junction_1	120894.98100289358	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	294	1271	30.0	2	True	AATAAA	-24
PB.11152.8	chr8	-	5101	23	novel_in_catalog	ASPH	novel	5268	25	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	284930	junction_17	749670.433887143	NA	2	1	TRUE	NA	NA	NA	C	coding	696	2091	209	2299	15.0	12	True	AATAAA	-18
PB.11152.9	chr8	-	5152	25	full-splice_match	ASPH	ENST00000379454.8	5268	25	-33	149	4	-149	multi-exon	FALSE	canonical	1	345915	junction_11	788805.9099981968	NA	0	NA	TRUE	NA	NA	NA	C	coding	758	2277	222	2498	35.0	-1	True	AATAAA	-42
PB.9468.6	chr5	-	2124	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	13	6589	13	-6589	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	305	918	298	1215	20.0	-1	True	TATAAA	-17
PB.9468.7	chr5	-	1747	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	13	6966	13	-6966	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	305	918	298	1215	20.0	-1	True	AATAAA	-19
PB.9468.4	chr5	-	1768	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	1035	5923	1035	-5923	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	1021	False	AATAAA	-15
PB.9468.5	chr5	-	2681	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	19	6026	19	-6026	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	305	918	292	1209	60.0	5	True	NA	NA
PB.9468.2	chr5	-	2986	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	16	5724	16	-5724	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	305	918	295	1212	25.0	2	True	AATAAA	-29
PB.7824.1	chr22	+	1143	6	full-splice_match	MEI1	ENST00000487535.5	1016	6	-12	-115	-12	0	multi-exon	FALSE	canonical	1	29704	junction_1	22485.598301134884	NA	0	NA	TRUE	NA	NA	NA	C	coding	202	609	379	987	25.0	-78	False	AATAAA	-16
PB.7824.2	chr22	+	1371	8	full-splice_match	MEI1	ENST00000476893.5	1191	8	-31	-149	17	0	multi-exon	FALSE	canonical	1	29044	junction_3	24253.409421593256	NA	2	NA	TRUE	NA	NA	NA	C	coding	288	867	350	1216	20.0	0	True	AATAAA	-15
PB.9468.1	chr5	-	3935	1	full-splice_match	HNRNPA0	ENST00000314940.6	8726	1	13	4778	13	-4778	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	305	918	298	1215	30.0	-1	True	AATAAA	-31
PB.6403.14	chr2	+	3200	5	novel_in_catalog	YIPF4	novel	11949	6	NA	NA	5	566	no_combination_of_known_junctions	FALSE	canonical	1	18208	junction_3	184123.0502753186	NA	1	NA	TRUE	NA	NA	NA	C	coding	218	657	242	898	100.0	5	True	NA	NA
PB.6403.15	chr2	+	1853	5	novel_in_catalog	YIPF4	novel	11949	6	NA	NA	9	719	no_combination_of_known_junctions	FALSE	canonical	1	18208	junction_3	184123.0502753186	NA	0	NA	TRUE	NA	NA	NA	C	coding	218	657	238	894	25.0	9	True	AATAAA	-30
PB.6403.10	chr2	+	1631	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	-3	10321	-3	407	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	250	984	35.0	-3	True	ACTAAA	-10
PB.8497.5	chr3	+	4085	24	full-splice_match	SMC4	ENST00000357388.7	5471	24	332	1054	-2	-2	multi-exon	FALSE	canonical	1	293192	junction_1	207171.06270986903	NA	0	NA	TRUE	NA	NA	NA	C	coding	1288	3867	120	3986	30.0	-14	True	TATAAA	-19
PB.6403.12	chr2	+	3378	7	novel_not_in_catalog	YIPF4	novel	11949	6	NA	NA	0	1351	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	174699.81197439478	NA	4	NA	TRUE	NA	NA	NA	C	coding	244	735	247	981	75.0	0	True	NA	NA
PB.6403.13	chr2	+	1924	6	full-splice_match	YIPF4	ENST00000238831.8	11949	6	0	10025	0	703	multi-exon	FALSE	canonical	1	320734	junction_2	87395.4792043616	NA	3	NA	TRUE	NA	NA	NA	C	coding	244	735	247	981	15.0	0	True	AATAAA	-14
PB.3068.12	chr13	-	4532	10	novel_not_in_catalog	USP12	novel	4511	9	NA	NA	93	-17	any annotated donor/acceptor	FALSE	canonical	1	1769	junction_3	43830.621291963296	NA	0	NA	TRUE	NA	NA	NA	C	coding	364	1095	165	1259	10.0	7	True	ATTAAA	-13
PB.3068.13	chr13	-	3487	9	full-splice_match	USP12	ENST00000282344.10	4511	9	85	939	85	-939	multi-exon	FALSE	canonical	1	35849	junction_2	35551.38884395904	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	173	1285	15.0	-1	True	ATTAAA	-14
PB.3068.10	chr13	-	4996	10	novel_not_in_catalog	USP12	novel	4511	9	NA	NA	84	-14	any annotated donor/acceptor	FALSE	canonical	1	617	junction_7	44007.93448913503	NA	1	NA	TRUE	NA	NA	NA	C	coding	329	990	880	1869	10.0	-2	True	ATTAAA	-16
PB.8455.12	chr3	-	1415	8	full-splice_match	PLSCR1	ENST00000487389.5	1443	8	52	-24	42	9	multi-exon	FALSE	canonical	1	65156	junction_7	225939.73633846236	NA	0	NA	TRUE	NA	NA	NA	C	coding	311	936	228	1163	25.0	171	False	AATGAA	-19
PB.10700.2	chr7	-	3421	8	novel_in_catalog	PTCD1	novel	5582	8	NA	NA	-41	-2395	intron_retention	FALSE	canonical	1	16728	junction_5	64699.102254441	NA	1	NA	TRUE	NA	NA	NA	C	coding	502	1509	1080	2588	50.0	0	True	NA	NA
PB.10700.3	chr7	-	3079	8	novel_not_in_catalog	PTCD1	novel	5582	8	NA	NA	-41	-2395	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	68267.58385072909	NA	4	NA	TRUE	NA	NA	NA	C	coding	700	2103	144	2246	50.0	0	True	NA	NA
PB.3068.14	chr13	-	2773	9	full-splice_match	USP12	ENST00000282344.10	4511	9	85	1653	85	-1653	multi-exon	FALSE	canonical	1	35849	junction_2	35551.38884395904	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	173	1285	20.0	-1	True	NA	NA
PB.3068.15	chr13	-	2268	9	full-splice_match	USP12	ENST00000282344.10	4511	9	84	2159	84	-2159	multi-exon	FALSE	canonical	1	35849	junction_2	35551.38884395904	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	174	1286	30.0	-2	True	ATTAAA	-11
PB.6084.1	chr19	+	1246	1	genic	EML2-AS1	novel	NA	NA	NA	NA	59	9	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-93	False	NA	NA
PB.10776.1	chr7	+	3815	10	incomplete-splice_match	HBP1	ENST00000468410.5	2704	11	21	-20	-8	-1	intron_retention	FALSE	canonical	1	61873	junction_1	178719.73651923888	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	32	1606	25.0	-1064	False	AATAAA	-26
PB.8421.4	chr3	+	1974	4	full-splice_match	NCK1	ENST00000481752.5	1971	4	0	-3	0	3	multi-exon	FALSE	canonical	1	34672	junction_1	168152.04163494418	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	165	1298	10.0	-25	True	AATAAA	-24
PB.8421.5	chr3	+	1890	5	novel_in_catalog	NCK1	novel	1937	4	NA	NA	0	-270	intron_retention	FALSE	canonical	1	1446	junction_1	193260.22074524287	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	486	1487	50.0	-25	True	TATAAA	-13
PB.8421.6	chr3	+	4442	4	full-splice_match	NCK1	ENST00000481752.5	1971	4	1	-2472	1	1775	multi-exon	FALSE	canonical	1	34672	junction_1	168152.04163494418	NA	5	NA	TRUE	NA	NA	NA	C	coding	377	1134	164	1297	50.0	-24	True	AATAAA	-16
PB.8421.7	chr3	+	1896	4	full-splice_match	NCK1	ENST00000288986.6	1937	4	45	-4	11	4	multi-exon	FALSE	canonical	1	143891	junction_1	118258.77495936141	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	86	1219	10.0	-14	False	AATAAA	-25
PB.8421.1	chr3	+	2069	5	novel_in_catalog	NCK1	novel	1937	4	NA	NA	-41	-4	intron_retention	FALSE	canonical	1	4628	junction_1	191550.47368317834	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	267	1400	10.0	-100	False	AATAAA	-17
PB.8421.2	chr3	+	3380	4	full-splice_match	NCK1	ENST00000288986.6	1937	4	0	-1443	0	746	multi-exon	FALSE	canonical	1	143891	junction_1	118258.77495936141	NA	3	NA	TRUE	NA	NA	NA	C	coding	377	1134	131	1264	25.0	-25	True	AAAAAG	-18
PB.8421.3	chr3	+	2929	4	full-splice_match	NCK1	ENST00000288986.6	1937	4	25	-1017	0	320	multi-exon	FALSE	canonical	1	143891	junction_1	118258.77495936141	NA	3	1	TRUE	NA	NA	NA	C	coding	377	1134	106	1239	35.0	0	True	TATAAA	-15
PB.8421.8	chr3	+	1666	4	full-splice_match	NCK1	ENST00000288986.6	1937	4	17	254	-8	-254	multi-exon	FALSE	canonical	1	143891	junction_1	118258.77495936141	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	114	1247	30.0	-8	True	TATAAA	-29
PB.8421.9	chr3	+	4392	4	full-splice_match	NCK1	ENST00000288986.6	1937	4	24	-2479	-1	1782	multi-exon	FALSE	canonical	1	143891	junction_1	118258.77495936141	NA	2	NA	TRUE	NA	NA	NA	C	coding	377	1134	107	1240	40.0	-1	True	AATAAA	-23
PB.9415.1	chr5	-	4889	20	full-splice_match	CEP120	ENST00000306467.9	4900	20	-79	90	-38	28	multi-exon	FALSE	canonical	1	108439	junction_19	32433.366152860854	NA	0	NA	TRUE	NA	NA	NA	C	coding	986	2961	385	3345	35.0	20	True	AATAAA	-13
PB.11313.10	chr8	-	3593	26	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	6	0	any annotated donor/acceptor	FALSE	canonical	1	241	junction_25	72086.94906720356	NA	11	2	TRUE	NA	NA	NA	B	coding	985	2955	639	3593	70.0	-17	False	NA	NA
PB.10528.4	chr7	-	3710	4	full-splice_match	H2AFV	ENST00000437072.5	589	4	-20	-3101	-19	-5	multi-exon	FALSE	canonical	1	74427	junction_2	148126.42727076085	NA	1	NA	TRUE	NA	NA	NA	C	coding	76	231	132	362	55.0	-23	True	NA	NA
PB.120.7	chr1	+	2006	8	full-splice_match	NECAP2	ENST00000337132.9	2070	8	63	1	-1	0	multi-exon	FALSE	canonical	1	317549	junction_1	214146.747384944	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	28	819	40.0	-7	True	AATAAA	-17
PB.11252.1	chr8	+	3667	1	novel_in_catalog	PTDSS1	novel	5177	13	NA	NA	1	-21808	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	91	276	128	403	80.0	-17	True	AAAAAG	-43
PB.11252.3	chr8	+	2518	13	full-splice_match	PTDSS1	ENST00000517309.5	5177	13	213	2446	15	-3	multi-exon	FALSE	canonical	1	778712	junction_1	165748.68771778155	NA	0	NA	TRUE	NA	NA	NA	C	coding	473	1422	114	1535	35.0	-3	True	AATAAA	-24
PB.11252.2	chr8	+	3262	12	novel_in_catalog	PTDSS1	novel	5177	13	NA	NA	15	-3	intron_retention	FALSE	canonical	1	778712	junction_1	157187.98218078286	NA	0	NA	TRUE	NA	NA	NA	C	coding	446	1341	114	1454	35.0	-3	True	AATAAA	-24
PB.8589.8	chr3	+	4729	9	novel_in_catalog	ST6GAL1	novel	4645	8	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	1	1682	junction_2	282715.5309274844	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	761	1981	15.0	-11	True	AATAAA	-18
PB.6896.9	chr2	+	2467	21	novel_not_in_catalog	WDR75	novel	2701	21	NA	NA	5	-189	any annotated donor/acceptor	FALSE	canonical	1	2367	junction_4	174809.50623729677	NA	0	NA	TRUE	NA	NA	NA	C	coding	589	1767	701	2467	65.0	-1	True	NA	NA
PB.455.4	chr1	+	3458	6	full-splice_match	AK4	ENST00000497030.5	834	6	-3	-2621	-3	1822	multi-exon	FALSE	canonical	1	102	junction_5	16019.150759013413	NA	5	NA	TRUE	NA	NA	NA	C	coding	223	672	251	922	0.0	-94	True	ATTAAA	-14
PB.4778.11	chr17	-	3029	23	novel_not_in_catalog	ELAC2	novel	2737	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	6695	junction_13	179762.21445528473	NA	1	1	TRUE	NA	NA	NA	C	coding	510	1533	1073	2605	15.0	2	True	AATAAA	-12
PB.4778.10	chr17	-	3061	23	novel_in_catalog	ELAC2	novel	2737	16	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	455733	junction_13	124388.08125183218	NA	0	NA	TRUE	NA	NA	NA	C	coding	837	2514	124	2637	15.0	1	True	AATAAA	-12
PB.4778.12	chr17	-	2743	24	novel_in_catalog	ELAC2	novel	2737	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	3589	junction_23	180302.6018759681	NA	0	NA	TRUE	NA	NA	NA	C	coding	732	2199	121	2319	15.0	-1	True	AATAAA	-12
PB.6590.2	chr2	-	2825	10	novel_in_catalog	RETSAT	novel	2335	8	NA	NA	-27	-11	no_combination_of_known_junctions	TRUE	canonical	1	9844	junction_7	160387.87595146406	NA	1	NA	TRUE	NA	NA	NA	B	coding	325	978	705	1682	35.0	9	True	AATAAA	-21
PB.10776.3	chr7	+	1590	10	incomplete-splice_match	HBP1	ENST00000468410.5	2704	11	42	2184	3	-7	3prime_fragment	FALSE	canonical	1	61873	junction_1	178719.73651923888	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	11	1585	30.0	0	True	AATAAA	-9
PB.6437.2	chr2	+	2320	1	intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	130	393	360	752	10.0	-2638	False	NA	NA
PB.6437.1	chr2	+	2250	1	intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	130	393	399	791	25.0	-2677	False	TTTAAA	-44
PB.360.1	chr1	+	2052	8	novel_not_in_catalog	B4GALT2	novel	360	2	NA	NA	17	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	340775.8321563264	NA	0	NA	TRUE	NA	NA	NA	A	coding	372	1119	213	1331	5.0	1	True	AGTAAA	-15
PB.455.5	chr1	+	1919	6	full-splice_match	AK4	ENST00000497030.5	834	6	47	-1132	47	333	multi-exon	FALSE	canonical	1	102	junction_5	16019.150759013413	NA	8	1	TRUE	NA	NA	NA	C	coding	223	672	201	872	30.0	-44	True	AATAAA	-22
PB.6607.11	chr2	+	3808	19	incomplete-splice_match	KDM3A	ENST00000409064.5	4621	26	15521	2	549	0	5prime_fragment	FALSE	canonical	1	249062	junction_2	102798.15996505295	NA	0	NA	TRUE	NA	NA	NA	C	coding	1036	3111	103	3213	15.0	-5232	False	ATTAAA	-13
PB.1075.5	chr1	+	3956	4	novel_in_catalog	RASSF5	novel	2064	6	NA	NA	35	0	intron_retention	FALSE	canonical	1	323017	junction_1	29724.98496028028	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	375	968	50.0	-7741	False	AATAAA	-11
PB.5723.1	chr19	+	1067	11	novel_in_catalog	CCDC159	novel	1408	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	60094	junction_1	65149.493602713446	NA	2	1	TRUE	NA	NA	NA	A	coding	296	891	111	1001	15.0	-33	True	AATAAA	-20
PB.5479.9	chr18	-	2729	15	novel_in_catalog	MBD1	novel	2532	15	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	78830	junction_5	171122.63314671826	NA	0	NA	TRUE	NA	NA	NA	C	coding	584	1755	194	1948	20.0	-25	True	TTTAAA	-29
PB.11418.1	chr8	+	2617	1	full-splice_match	ZNF252P-AS1	ENST00000527067.1	3236	1	202	417	202	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	27	84	527	610	30.0	8145	False	AATAAA	-16
PB.455.6	chr1	+	2076	6	full-splice_match	AK4	ENST00000395334.6	6998	6	-208	5130	-47	124	multi-exon	FALSE	canonical	1	102	junction_5	13511.31268826238	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	567	1238	75.0	-18	True	NA	NA
PB.6356.2	chr2	+	3556	2	novel_in_catalog	AC104699.1	novel	414	3	NA	NA	-23	3249	no_combination_of_known_junctions	FALSE	canonical	1	52407	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	70.0	1	True	NA	NA
PB.6964.6	chr2	+	6742	16	full-splice_match	NRP2	ENST00000272849.7	5909	16	-836	3	-45	-3	multi-exon	FALSE	canonical	1	7766	junction_15	56887.60422501744	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2721	837	3557	25.0	0	True	AATAAA	-19
PB.6964.7	chr2	+	3119	17	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	-45	1470	any annotated donor/acceptor	FALSE	canonical	1	227	junction_16	64190.681604692436	NA	2	NA	TRUE	NA	NA	NA	C	coding	820	2463	652	3114	25.0	0	True	AATAAA	-45
PB.6964.4	chr2	+	6550	17	novel_in_catalog	NRP2	novel	1531	4	NA	NA	-52	-2	combination_of_known_junctions	FALSE	canonical	1	8177	junction_16	62983.310225681016	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	659	3364	20.0	-7	True	AATAAA	-20
PB.6964.5	chr2	+	5696	15	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	-52	1181	intron_retention	FALSE	canonical	0	0	junction_14	53721.99640766816	NA	7	1	TRUE	NA	NA	NA	C	coding	816	2451	844	3294	30.0	-7	True	AATAAA	-23
PB.6964.2	chr2	+	3330	16	novel_not_in_catalog	NRP2	novel	1531	4	NA	NA	-71	1470	intron_retention	TRUE	canonical	1	227	junction_15	58306.54517366715	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2463	863	3325	25.0	-3062	False	AATAAA	-45
PB.6964.3	chr2	+	4177	16	full-splice_match	NRP2	ENST00000357118.8	3367	16	-812	2	-52	-2	multi-exon	FALSE	canonical	1	8177	junction_15	56811.0191490661	NA	0	NA	TRUE	NA	NA	NA	C	coding	901	2706	844	3549	5.0	-7	True	NA	NA
PB.3322.30	chr14	-	3029	1	novel_in_catalog	ACIN1	novel	4474	19	NA	NA	14	-14314	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	52	159	330	488	85.0	-4	True	NA	NA
PB.7049.11	chr2	+	1785	8	novel_in_catalog	MFF	novel	581	4	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	78319	junction_1	177896.7084703127	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	200	1075	30.0	1	True	AATAAA	-10
PB.6964.8	chr2	+	3601	15	incomplete-splice_match	NRP2	ENST00000357118.8	3367	16	-803	10011	-43	81	3prime_fragment	FALSE	canonical	1	66566	junction_14	39120.28772672088	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	835	3321	80.0	2	True	NA	NA
PB.10700.1	chr7	-	3572	8	full-splice_match	PTCD1	ENST00000292478.8	5582	8	-385	2395	-385	-2395	multi-exon	FALSE	canonical	1	107511	junction_7	41402.060723138515	NA	0	NA	TRUE	NA	NA	NA	C	coding	685	2058	682	2739	50.0	-34	False	NA	NA
PB.9410.7	chr5	+	1749	2	full-splice_match	TNFAIP8	ENST00000504771.2	8681	2	1687	5245	-34	-155	multi-exon	FALSE	canonical	1	207019	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	91	687	15.0	1	True	AGTAAA	-21
PB.9410.6	chr5	+	1838	2	full-splice_match	TNFAIP8	ENST00000513374.1	1385	2	28	-481	28	-374	multi-exon	FALSE	canonical	1	61342	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	210	633	363	995	50.0	-23	True	AATAAA	-15
PB.9410.5	chr5	+	2022	2	novel_not_in_catalog	TNFAIP8	novel	795	2	NA	NA	10	0	any annotated donor/acceptor	FALSE	canonical	1	4224	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	305	805	15.0	22	True	AATAAA	-14
PB.9410.4	chr5	+	2240	2	full-splice_match	TNFAIP8	ENST00000513374.1	1385	2	1	-856	1	0	multi-exon	FALSE	canonical	1	61342	junction_1	0.0	NA	11	NA	TRUE	NA	NA	NA	C	coding	210	633	390	1022	10.0	13	True	AATAAA	-15
PB.7814.1	chr22	+	4036	4	full-splice_match	TEF	ENST00000266304.8	4394	4	8	350	8	-348	multi-exon	FALSE	canonical	1	77185	junction_1	49466.81479762187	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	109	1020	35.0	-5	True	AATAAA	-18
PB.9410.2	chr5	+	1991	2	full-splice_match	TNFAIP8	ENST00000274456.6	795	2	8	-1204	8	0	multi-exon	FALSE	canonical	1	157178	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	208	774	15.0	-6331	False	AATAAA	-14
PB.9410.1	chr5	+	1862	2	full-splice_match	TNFAIP8	ENST00000274456.6	795	2	-23	-1044	-23	-160	multi-exon	FALSE	canonical	1	157178	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	239	805	20.0	-6362	False	AGTAAA	-16
PB.7814.2	chr22	+	4378	4	full-splice_match	TEF	ENST00000266304.8	4394	4	13	3	13	-1	multi-exon	FALSE	canonical	1	77185	junction_1	49466.81479762187	NA	0	NA	TRUE	NA	NA	NA	C	coding	303	912	104	1015	15.0	0	True	ATTAAA	-14
PB.8906.1	chr4	-	2158	10	novel_not_in_catalog	SLC9B1	novel	1735	12	NA	NA	-6	1698	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	3388.412600410004	NA	0	NA	TRUE	NA	NA	NA	A	coding	373	1122	92	1213	20.0	-38	True	NA	NA
PB.9410.9	chr5	+	3538	1	novel_in_catalog	TNFAIP8	novel	795	2	NA	NA	-16	-33528	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	0	True	TTTAAA	-14
PB.9410.8	chr5	+	1906	2	full-splice_match	TNFAIP8	ENST00000504771.2	8681	2	1686	5089	-35	0	multi-exon	FALSE	canonical	1	207019	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	92	688	10.0	0	True	AATAAA	-15
PB.6427.1	chr2	+	1915	7	full-splice_match	GALM	ENST00000272252.9	2484	7	184	385	13	-385	multi-exon	FALSE	canonical	1	160829	junction_1	7901.984000166597	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	69	1097	100.0	-20	True	NA	NA
PB.6427.2	chr2	+	2296	7	full-splice_match	GALM	ENST00000272252.9	2484	7	184	4	13	-4	multi-exon	FALSE	canonical	1	160829	junction_1	7901.984000166597	NA	2	NA	TRUE	NA	NA	NA	C	coding	342	1029	69	1097	25.0	-20	True	AATAAA	-19
PB.10992.9	chr8	+	4230	8	incomplete-splice_match	TUSC3	ENST00000503731.5	1498	11	-21	17723	-17	-2110	3prime_fragment	FALSE	canonical	1	394118	junction_1	148672.63624816638	NA	3	NA	TRUE	NA	NA	NA	C	coding	330	993	170	1162	65.0	-1	True	AAAAAG	-37
PB.10992.8	chr8	+	1507	11	novel_in_catalog	TUSC3	novel	731	6	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	1	46677	junction_10	265053.506789101	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	170	1216	50.0	-1	True	AATAAA	-16
PB.2374.9	chr11	-	6282	13	novel_not_in_catalog	SNX19	novel	6535	11	NA	NA	13	-444	intron_retention	FALSE	non_canonical	0	0	junction_4	79761.6185996679	NA	2	NA	TRUE	NA	NA	NA	C	coding	1070	3213	528	3740	40.0	12	True	AATAAA	-31
PB.2374.8	chr11	-	5951	10	novel_in_catalog	SNX19	novel	6535	11	NA	NA	-7	-441	intron_retention	FALSE	canonical	1	4598	junction_7	73412.35329137581	NA	5	NA	TRUE	NA	NA	NA	C	coding	952	2859	548	3406	35.0	-8	True	AATAAA	-34
PB.2374.7	chr11	-	4068	11	full-splice_match	SNX19	ENST00000528555.5	1506	11	-45	-2517	13	-440	multi-exon	FALSE	canonical	1	30079	junction_10	65513.306987512085	NA	2	NA	TRUE	NA	NA	NA	C	coding	372	1119	404	1522	35.0	12	False	AATAAA	-35
PB.10992.4	chr8	+	1565	11	full-splice_match	TUSC3	ENST00000503731.5	1498	11	-42	-25	8	25	multi-exon	FALSE	canonical	1	169740	junction_10	240567.53734369483	NA	0	NA	TRUE	NA	NA	NA	C	coding	348	1047	191	1237	25.0	-22	False	AATAAA	-17
PB.2374.5	chr11	-	5210	11	full-splice_match	SNX19	ENST00000265909.8	6535	11	881	444	816	-444	multi-exon	FALSE	canonical	1	83269	junction_3	53932.77108994123	NA	2	NA	TRUE	NA	NA	NA	C	coding	885	2658	11	2668	40.0	880	False	AATAAA	-31
PB.2374.4	chr11	-	5201	11	novel_not_in_catalog	SNX19	novel	6535	11	NA	NA	15	-437	any annotated donor/acceptor	FALSE	canonical	1	5904	junction_10	69948.1510455423	NA	2	NA	TRUE	NA	NA	NA	C	coding	698	2097	556	2652	35.0	14	False	AATAAA	-38
PB.2374.3	chr11	-	4243	11	novel_in_catalog	SNX19	novel	6535	11	NA	NA	-7	-437	combination_of_known_junctions	FALSE	canonical	1	7914	junction_9	77214.04448861619	NA	2	NA	TRUE	NA	NA	NA	C	coding	417	1254	441	1694	35.0	-8	True	AATAAA	-38
PB.2374.2	chr11	-	4047	11	novel_in_catalog	SNX19	novel	6535	11	NA	NA	-8	-436	combination_of_known_junctions	FALSE	canonical	1	7358	junction_6	75902.51906682675	NA	2	NA	TRUE	NA	NA	NA	C	coding	229	690	808	1497	35.0	-9	True	AATAAA	-39
PB.2374.1	chr11	-	6392	11	full-splice_match	SNX19	ENST00000265909.8	6535	11	25	118	-5	-118	multi-exon	FALSE	canonical	1	83269	junction_3	53932.77108994123	NA	3	NA	TRUE	NA	NA	NA	C	coding	992	2979	546	3524	25.0	-6	True	AATACA	-37
PB.10992.2	chr8	+	2294	10	full-splice_match	TUSC3	ENST00000382020.8	3683	10	1	1388	1	600	multi-exon	FALSE	canonical	1	394118	junction_1	166924.7619308002	NA	0	NA	TRUE	NA	NA	NA	C	coding	347	1044	208	1251	40.0	1	True	NA	NA
PB.10780.6	chr7	+	2545	14	full-splice_match	DLD	ENST00000205402.9	3755	14	182	1028	-10	462	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	100	1629	25.0	-31	True	AATATA	-22
PB.10780.7	chr7	+	3536	14	full-splice_match	DLD	ENST00000205402.9	3755	14	191	28	-1	-28	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	2	NA	TRUE	NA	NA	NA	C	coding	509	1530	91	1620	45.0	-22	True	AATAAA	-10
PB.10780.4	chr7	+	2090	14	full-splice_match	DLD	ENST00000205402.9	3755	14	204	1461	0	29	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	78	1607	20.0	-9	True	TATAAA	-17
PB.10780.5	chr7	+	2210	14	novel_in_catalog	DLD	novel	3755	14	NA	NA	-13	29	combination_of_known_junctions	FALSE	canonical	1	3351	junction_5	357137.1212771506	NA	8	NA	TRUE	NA	NA	NA	C	coding	387	1164	564	1727	20.0	-34	True	TATAAA	-17
PB.10780.2	chr7	+	4527	14	full-splice_match	DLD	ENST00000205402.9	3755	14	172	-944	-20	944	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	3	NA	TRUE	NA	NA	NA	C	coding	509	1530	110	1639	45.0	-41	True	NA	NA
PB.10780.3	chr7	+	3530	13	novel_in_catalog	DLD	novel	3755	14	NA	NA	-18	29	intron_retention	FALSE	canonical	1	716966	junction_2	213871.9242726272	NA	0	NA	TRUE	NA	NA	NA	C	coding	387	1164	1884	3047	20.0	-39	True	TATAAA	-17
PB.10780.1	chr7	+	3680	14	full-splice_match	DLD	ENST00000205402.9	3755	14	171	-96	-21	96	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	111	1640	10.0	-42	True	ATTAAA	-19
PB.7164.33	chr20	-	2124	19	incomplete-splice_match	GPCPD1	ENST00000379019.5	5489	20	-17	13476	-17	931	3prime_fragment	FALSE	canonical	1	30025	junction_15	102677.07395350884	NA	5	NA	TRUE	NA	NA	NA	C	coding	621	1866	231	2096	55.0	-48	False	NA	NA
PB.10780.8	chr7	+	1914	15	novel_not_in_catalog	DLD	novel	3755	14	NA	NA	0	249	any annotated donor/acceptor	FALSE	canonical	1	2231	junction_14	344387.2017826648	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	90	1619	25.0	-21	True	AATAAA	-13
PB.10780.9	chr7	+	3776	14	full-splice_match	DLD	ENST00000205402.9	3755	14	193	-214	1	214	multi-exon	FALSE	canonical	1	716966	junction_2	206490.56735185254	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	89	1618	65.0	-20	True	NA	NA
PB.534.1	chr1	+	3190	12	novel_not_in_catalog	CDC7	novel	3173	12	NA	NA	-84	4	any annotated donor/acceptor	TRUE	canonical	1	12816	junction_1	49476.95145141442	NA	4	NA	TRUE	NA	NA	NA	C	coding	574	1725	133	1857	45.0	-5	True	AATAAA	-26
PB.534.6	chr1	+	3180	12	novel_not_in_catalog	CDC7	novel	3173	12	NA	NA	-42	-1	any annotated donor/acceptor	FALSE	canonical	1	6354	junction_1	51125.06759598675	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	128	1852	30.0	-17	True	AATAAA	-21
PB.561.7	chr1	+	5413	5	novel_in_catalog	SLC35A3	novel	2298	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	84940	junction_1	64454.31587760435	NA	3	NA	TRUE	NA	NA	NA	C	coding	205	618	184	801	35.0	-15	True	AATAAA	-19
PB.10338.102	chr6	-	2667	4	incomplete-splice_match	THBS2	ENST00000617924.4	5280	22	-16	28179	-10	1694	3prime_fragment	FALSE	canonical	1	288867	junction_1	38734.03259265537	NA	2	NA	TRUE	NA	NA	NA	C	coding	265	798	148	945	25.0	-3	True	NA	NA
PB.10338.103	chr6	-	2544	4	incomplete-splice_match	THBS2	ENST00000617924.4	5280	22	-13	28299	-7	1574	3prime_fragment	FALSE	canonical	1	288867	junction_1	38734.03259265537	NA	1	NA	TRUE	NA	NA	NA	C	coding	265	798	145	942	30.0	0	True	NA	NA
PB.11866.10	chr9	-	6264	15	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-9	34550	-9	-13136	3prime_fragment	FALSE	canonical	1	189648	junction_11	48606.98680923833	NA	0	NA	TRUE	NA	NA	NA	C	coding	2024	6072	193	6264	70.0	-9	True	NA	NA
PB.455.1	chr1	+	1681	6	full-splice_match	AK4	ENST00000497030.5	834	6	43	-890	43	91	multi-exon	FALSE	canonical	1	102	junction_5	16019.150759013413	NA	0	NA	TRUE	NA	NA	NA	C	coding	223	672	205	876	20.0	-48	True	ATTAAA	-16
PB.534.5	chr1	+	3937	11	novel_in_catalog	CDC7	novel	3173	12	NA	NA	-50	9	intron_retention	FALSE	canonical	1	137511	junction_6	24338.40057686618	NA	1	NA	TRUE	NA	NA	NA	C	coding	574	1725	875	2599	40.0	-25	True	AATAAA	-31
PB.1481.11	chr10	+	2885	11	full-splice_match	ADK	ENST00000372734.3	2083	11	76	-878	76	878	multi-exon	FALSE	canonical	1	330053	junction_1	133978.61027496142	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	112	1149	45.0	-1	True	TATAAA	-20
PB.1481.10	chr10	+	1269	11	full-splice_match	ADK	ENST00000372734.3	2083	11	64	750	64	78	multi-exon	FALSE	canonical	1	330053	junction_1	133978.61027496142	NA	1	NA	TRUE	NA	NA	NA	C	coding	345	1038	124	1161	40.0	-13	True	AATAAA	-33
PB.1481.12	chr10	+	1744	11	full-splice_match	ADK	ENST00000372734.3	2083	11	76	263	76	-259	multi-exon	FALSE	canonical	1	330053	junction_1	133978.61027496142	NA	0	NA	TRUE	NA	NA	NA	C	coding	345	1038	112	1149	35.0	-1	True	AATAAA	-30
PB.9466.1	chr5	+	2298	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	-64	4778	-64	-51	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	436	1824	30.0	-64	False	AAAAAG	-19
PB.9466.2	chr5	+	5028	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	-33	2017	-33	-2017	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	3	NA	TRUE	NA	NA	NA	C	coding	462	1389	405	1793	65.0	-33	False	TATAAA	-30
PB.9466.3	chr5	+	4184	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	-24	2852	-24	1875	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	396	1784	20.0	-24	False	AGTAAA	-13
PB.9466.4	chr5	+	7013	8	full-splice_match	SMAD5	ENST00000545279.5	7012	8	0	-1	0	1	multi-exon	FALSE	canonical	1	105292	junction_1	89878.36542794935	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	372	1760	10.0	0	True	AATAAA	-13
PB.9466.5	chr5	+	6939	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	-2	0	0	0	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	0	NA	TRUE	NA	NA	NA	C	coding	462	1389	297	1685	10.0	0	True	AATAAA	-14
PB.9466.6	chr5	+	6438	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	-2	501	0	-499	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	297	1685	70.0	0	True	NA	NA
PB.9466.7	chr5	+	3600	7	full-splice_match	SMAD5	ENST00000545620.5	6937	7	68	3269	1	1460	multi-exon	FALSE	canonical	1	68749	junction_1	96129.76496209	NA	6	NA	TRUE	NA	NA	NA	C	coding	462	1389	227	1615	65.0	70	True	NA	NA
PB.5023.5	chr17	+	4402	24	novel_not_in_catalog	DHX8	novel	590	4	NA	NA	29	-1358	any annotated donor/acceptor	FALSE	canonical	1	1543	junction_19	104696.37803397447	NA	0	NA	TRUE	NA	NA	NA	C	coding	938	2817	44	2860	40.0	11	True	NA	NA
PB.5023.4	chr17	+	4175	23	full-splice_match	DHX8	ENST00000262415.7	5558	23	25	1358	25	-1358	multi-exon	FALSE	canonical	1	214916	junction_8	61594.868955646154	NA	0	NA	TRUE	NA	NA	NA	C	coding	1220	3663	48	3710	40.0	7	True	NA	NA
PB.5023.1	chr17	+	3845	23	full-splice_match	DHX8	ENST00000540306.5	3809	23	-28	-8	-25	-2	multi-exon	FALSE	canonical	1	12449	junction_22	87381.41392423655	NA	0	NA	TRUE	NA	NA	NA	C	coding	1181	3546	104	3649	20.0	-49	False	ATTAAA	-21
PB.5023.3	chr17	+	4095	22	novel_in_catalog	DHX8	novel	590	4	NA	NA	19	-1358	combination_of_known_junctions	FALSE	canonical	1	8478	junction_1	89298.60532473792	NA	0	NA	TRUE	NA	NA	NA	C	coding	1129	3390	241	3630	40.0	1	True	NA	NA
PB.5023.2	chr17	+	4682	22	novel_in_catalog	DHX8	novel	590	4	NA	NA	1	-1358	intron_retention	FALSE	canonical	1	214916	junction_8	62647.33387286873	NA	1	NA	TRUE	NA	NA	NA	C	coding	1007	3024	72	3095	40.0	-17	True	NA	NA
PB.5172.2	chr17	+	2663	10	incomplete-splice_match	MAP3K3	ENST00000361733.7	3529	16	59349	21	-6410	-5	5prime_fragment	FALSE	canonical	1	152822	junction_2	59552.284517757595	NA	0	NA	TRUE	NA	NA	NA	B	coding	414	1245	112	1356	90.0	NA	False	NA	NA
PB.3379.1	chr14	-	3286	14	full-splice_match	SNX6	ENST00000362031.8	2001	14	29	-1314	0	-1	multi-exon	FALSE	canonical	1	281529	junction_5	182746.41307920002	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	39	1259	30.0	-15	True	NA	NA
PB.5172.1	chr17	+	2652	10	incomplete-splice_match	MAP3K3	ENST00000577395.5	2016	16	59078	-1210	-6411	-5	5prime_fragment	TRUE	canonical	1	99936	junction_2	72933.15193473954	NA	0	NA	TRUE	NA	NA	NA	B	coding	410	1233	113	1345	90.0	NA	False	NA	NA
PB.9174.1	chr5	+	4943	18	full-splice_match	RAI14	ENST00000265109.7	5092	18	133	16	-29	0	multi-exon	FALSE	canonical	1	211350	junction_10	91517.54565079111	NA	1	NA	TRUE	NA	NA	NA	C	coding	980	2943	155	3097	10.0	-32	True	AATAAA	-16
PB.9234.7	chr5	-	3058	12	novel_in_catalog	MIER3	novel	5210	13	NA	NA	-1	850	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_11	60192.27193717378	NA	4	1	TRUE	NA	NA	NA	B	coding	522	1569	96	1664	45.0	-4	True	ATTAAA	-27
PB.9234.6	chr5	-	4147	12	novel_in_catalog	MIER3	novel	5210	13	NA	NA	-1	-1041	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_11	54148.45310352025	NA	4	1	TRUE	NA	NA	NA	B	coding	523	1572	93	1664	10.0	-1	True	TTTAAA	-7
PB.9234.4	chr5	-	5085	12	novel_not_in_catalog	MIER3	novel	5210	13	NA	NA	0	0	any annotated donor/acceptor	FALSE	canonical	0	0	junction_11	66215.77596423269	NA	4	1	TRUE	NA	NA	NA	B	coding	324	975	92	1066	10.0	0	True	AATAAA	-16
PB.9234.3	chr5	-	5189	12	novel_in_catalog	MIER3	novel	5210	13	NA	NA	-1	0	no_combination_of_known_junctions	FALSE	canonical	0	0	junction_11	54148.45310352025	NA	6	1	TRUE	NA	NA	NA	B	coding	523	1572	93	1664	10.0	-1	True	AATAAA	-16
PB.3379.3	chr14	-	2963	14	full-splice_match	SNX6	ENST00000362031.8	2001	14	42	-1004	-8	-311	multi-exon	FALSE	canonical	1	281529	junction_5	182746.41307920002	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	26	1246	40.0	-2	True	NA	NA
PB.9121.3	chr5	+	1875	13	full-splice_match	TRIP13	ENST00000166345.7	2672	13	219	578	-22	94	multi-exon	FALSE	canonical	1	257238	junction_1	59108.92591013645	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	138	1436	25.0	-22	True	ATTAAA	-17
PB.3379.5	chr14	-	2858	13	novel_in_catalog	SNX6	novel	3398	13	NA	NA	6	-311	combination_of_known_junctions	FALSE	canonical	1	53091	junction_10	220380.37994958222	NA	1	NA	TRUE	NA	NA	NA	C	coding	369	1110	32	1141	40.0	-8	True	NA	NA
PB.3379.4	chr14	-	3095	15	novel_in_catalog	SNX6	novel	3398	13	NA	NA	-6	-311	combination_of_known_junctions	FALSE	canonical	1	13465	junction_10	246968.9321202824	NA	1	NA	TRUE	NA	NA	NA	C	coding	294	885	494	1378	40.0	0	True	NA	NA
PB.1732.2	chr11	+	3593	10	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	202	-4	combination_of_known_junctions	FALSE	canonical	1	19540	junction_1	286240.6743278361	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	1569	2834	45.0	1	True	AATAAA	-16
PB.11601.7	chr9	-	2832	4	full-splice_match	ABHD17B	ENST00000333421.6	2614	4	-461	243	-272	-243	multi-exon	FALSE	canonical	1	148186	junction_3	57098.74565074866	NA	0	NA	TRUE	NA	NA	NA	C	coding	288	867	574	1440	75.0	-11	True	AATGAA	-10
PB.3379.6	chr14	-	2750	12	novel_in_catalog	SNX6	novel	3398	13	NA	NA	9	-311	no_combination_of_known_junctions	FALSE	canonical	1	5905	junction_1	188714.1453450756	NA	2	1	TRUE	NA	NA	NA	C	coding	324	975	59	1033	40.0	2	True	NA	NA
PB.9742.3	chr6	+	3272	4	novel_not_in_catalog	HIVEP1	novel	579	4	NA	NA	-21	2656	any annotated donor/acceptor	FALSE	canonical	1	162	junction_1	36172.14046749238	NA	0	NA	TRUE	NA	NA	NA	B	coding	1027	3081	190	3270	65.0	2	True	NA	NA
PB.10594.7	chr7	-	2438	7	incomplete-splice_match	BAZ1B	ENST00000404251.1	5428	19	263	35540	257	-14641	3prime_fragment	FALSE	canonical	1	274354	junction_6	99161.94280905687	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2355	83	2437	65.0	14	True	NA	NA
PB.9742.2	chr6	+	8910	9	novel_in_catalog	HIVEP1	novel	579	4	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	1	19788	junction_1	40671.901718969326	NA	0	NA	TRUE	NA	NA	NA	B	coding	2718	8157	216	8372	10.0	-55	True	AGTAAA	-20
PB.11646.20	chr9	-	6543	35	novel_not_in_catalog	IARS	novel	4656	34	NA	NA	1	2	intron_retention	FALSE	canonical	1	18977	junction_15	458382.45549573767	NA	1	NA	TRUE	NA	NA	NA	C	coding	721	2166	91	2256	40.0	1	True	AATAAA	-14
PB.10594.6	chr7	-	2554	7	incomplete-splice_match	BAZ1B	ENST00000404251.1	5428	19	251	35436	245	-14537	3prime_fragment	FALSE	canonical	1	274354	junction_6	99161.94280905687	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2460	95	2554	55.0	2	True	AATAAA	-43
PB.10795.1	chr7	-	1818	3	full-splice_match	SMIM30	ENST00000397764.7	1070	3	59	-807	0	807	multi-exon	FALSE	canonical	1	28439	junction_1	24144.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-1	True	AATAAA	-14
PB.10795.2	chr7	-	1009	3	full-splice_match	SMIM30	ENST00000397764.7	1070	3	59	2	0	-2	multi-exon	FALSE	canonical	1	28439	junction_1	24144.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	ATTAAA	-25
PB.9742.4	chr6	+	8881	9	novel_not_in_catalog	HIVEP1	novel	579	4	NA	NA	-20	-1	any annotated donor/acceptor	FALSE	canonical	1	162	junction_1	45877.77840087726	NA	3	NA	TRUE	NA	NA	NA	B	coding	2718	8157	189	8345	15.0	3	True	AGTAAA	-18
PB.10453.2	chr7	+	4018	1	full-splice_match	HOTAIRM1	ENST00000593300.1	647	1	-3386	15	0	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	224	675	1713	2387	55.0	9	True	AATAAA	-14
PB.6919.7	chr2	-	3076	1	novel_in_catalog	PGAP1	novel	1246	11	NA	NA	-11	-32814	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	120	363	141	503	90.0	-27	True	NA	NA
PB.8740.4	chr4	+	2763	11	full-splice_match	KLHL5	ENST00000508137.6	2926	11	-213	376	-192	-374	multi-exon	FALSE	canonical	1	112041	junction_1	110494.40879632779	NA	1	NA	TRUE	NA	NA	NA	C	coding	568	1707	291	1997	35.0	20	True	AATAAA	-14
PB.10594.3	chr7	-	6105	20	full-splice_match	BAZ1B	ENST00000339594.8	6102	20	-21	18	-15	-18	multi-exon	FALSE	canonical	1	79781	junction_1	165634.52350472444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1483	4452	361	4812	45.0	-1	True	AATAAA	-38
PB.1252.1	chr1	+	2343	6	full-splice_match	TRIM58	ENST00000366481.3	3225	6	85	797	85	-797	multi-exon	FALSE	canonical	1	139727	junction_5	119888.72764259366	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	396	1424	90.0	-86	False	NA	NA
PB.8740.1	chr4	+	3108	11	full-splice_match	KLHL5	ENST00000508137.6	2926	11	-182	0	-161	0	multi-exon	FALSE	canonical	1	112041	junction_1	110494.40879632779	NA	3	NA	TRUE	NA	NA	NA	C	coding	568	1707	260	1966	30.0	-1	True	GATAAA	-19
PB.8740.2	chr4	+	3564	12	full-splice_match	KLHL5	ENST00000261425.7	3425	12	-140	1	-140	0	multi-exon	FALSE	canonical	1	14254	junction_1	124718.20440868134	NA	4	NA	TRUE	NA	NA	NA	C	coding	709	2130	293	2422	30.0	20	True	GATAAA	-19
PB.8740.3	chr4	+	2916	12	novel_not_in_catalog	KLHL5	novel	3425	12	NA	NA	-212	-79	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	124600.05636150113	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	149	1855	25.0	0	True	TTTAAA	-24
PB.12108.2	chrX	-	1644	5	full-splice_match	SPIN3	ENST00000478405.1	1620	5	-28	4	0	-4	multi-exon	FALSE	canonical	1	18377	junction_1	12093.868268155562	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-15	True	AATAAA	-16
PB.12108.3	chrX	-	4443	2	full-splice_match	SPIN3	ENST00000374919.5	4642	2	198	1	-1	-1	multi-exon	FALSE	canonical	1	43780	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	328	1104	20.0	-2	True	NA	NA
PB.8838.12	chr4	+	1943	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	-64	736	-16	586	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	0	NA	TRUE	NA	NA	NA	C	coding	425	1278	218	1495	15.0	-9585	False	AATGAA	-16
PB.12108.1	chrX	-	1666	5	full-splice_match	SPIN3	ENST00000640131.1	2938	5	6	1266	2	-4	multi-exon	FALSE	canonical	1	18377	junction_1	11390.972288944435	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-11	True	AATAAA	-16
PB.12108.6	chrX	-	3594	3	novel_in_catalog	SPIN3	novel	3070	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	10362	junction_1	6309.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-13	True	NA	NA
PB.12108.7	chrX	-	3590	3	novel_in_catalog	SPIN3	novel	3070	8	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	10362	junction_1	16709.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	17	True	NA	NA
PB.12108.4	chrX	-	4715	1	full-splice_match	SPIN3	ENST00000638289.1	4614	1	9	-110	-1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	258	777	600	1376	20.0	-8	True	NA	NA
PB.12108.5	chrX	-	4389	2	full-splice_match	SPIN3	ENST00000639007.1	4277	2	2	-114	0	-1	multi-exon	FALSE	canonical	1	7007	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	258	777	274	1050	20.0	-13	True	NA	NA
PB.8838.18	chr4	+	5282	10	full-splice_match	SEPT11	ENST00000264893.10	5593	10	48	263	0	-263	multi-exon	FALSE	canonical	1	428656	junction_1	239175.43104302598	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	154	1443	35.0	-2	True	NA	NA
PB.8838.19	chr4	+	4792	9	full-splice_match	SEPT11	ENST00000502584.5	2615	9	1	-2178	1	-331	multi-exon	FALSE	canonical	1	428656	junction_1	232845.79491609757	NA	2	NA	TRUE	NA	NA	NA	C	coding	425	1278	153	1430	30.0	-1	True	ATTAAA	-22
PB.12108.8	chrX	-	3238	3	full-splice_match	SPIN3	ENST00000639605.1	2331	3	-174	-733	1	-1	multi-exon	FALSE	canonical	1	3307	junction_1	20236.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	258	777	326	1102	20.0	0	True	NA	NA
PB.12108.9	chrX	-	2423	4	full-splice_match	SPIN3	ENST00000638845.1	2010	4	-289	-124	-2	-1	multi-exon	FALSE	canonical	1	3307	junction_1	17652.823123291702	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-19	True	NA	NA
PB.5436.9	chr18	+	3847	5	novel_not_in_catalog	DSG2	novel	5831	15	NA	NA	-18	-158	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	176804.86176078417	NA	6	1	TRUE	NA	NA	NA	C	coding	501	1506	235	1740	20.0	24	True	AATAAA	-17
PB.858.17	chr1	-	7302	3	incomplete-splice_match	SLAMF1	ENST00000538290.2	1087	8	-84	17343	-21	8903	3prime_fragment	FALSE	canonical	1	227876	junction_2	5605.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	301	906	98	1003	35.0	1	True	NA	NA
PB.11122.3	chr8	+	3224	20	novel_in_catalog	SPIDR	novel	3988	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	13275	junction_2	80179.51970716036	NA	2	NA	TRUE	NA	NA	NA	C	coding	855	2568	196	2763	30.0	3	True	AATAAA	-11
PB.526.5	chr1	-	2339	11	novel_not_in_catalog	GBP5	novel	4112	4	NA	NA	-83	1	any annotated donor/acceptor	FALSE	canonical	1	44885	junction_10	190700.8038745773	NA	0	NA	TRUE	NA	NA	NA	B	coding	586	1761	456	2216	45.0	-1	True	AATAAA	-27
PB.8508.1	chr3	+	1602	9	full-splice_match	SERPINI1	ENST00000446050.6	1890	9	288	0	-5	0	multi-exon	FALSE	canonical	1	293730	junction_3	80140.6538896419	NA	0	NA	TRUE	NA	NA	NA	A	coding	410	1233	125	1357	25.0	-5	True	AATAAA	-20
PB.8510.18	chr3	+	2669	8	novel_not_in_catalog	MYNN	novel	4999	8	NA	NA	-8	3	any annotated donor/acceptor	FALSE	canonical	1	12264	junction_2	74701.70273036839	NA	0	NA	TRUE	NA	NA	NA	C	coding	496	1491	310	1800	50.0	-8	True	AATAAA	-14
PB.484.27	chr1	-	2601	21	novel_in_catalog	USP33	novel	4327	24	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	102471	junction_8	99908.61265990784	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2343	258	2600	75.0	21	False	NA	NA
PB.1399.1	chr10	-	2200	1	intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	118	357	1612	1968	35.0	-3	True	NA	NA
PB.1732.5	chr11	+	2422	9	novel_in_catalog	RIC8A	novel	3703	10	NA	NA	-83	-9	no_combination_of_known_junctions	FALSE	canonical	1	2013	junction_7	339396.25217205554	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	139	1353	45.0	-7352	False	AATAAA	-11
PB.5750.10	chr19	-	2587	19	novel_not_in_catalog	AC010422.3	novel	838	5	NA	NA	-18351	-2682	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_11	311450.81910311297	NA	0	NA	TRUE	NA	NA	NA	B	coding	810	2433	48	2480	15.0	-7	True	ATTAAA	-19
PB.5436.3	chr18	+	3996	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	135	1700	-42	-1700	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	1	NA	TRUE	NA	NA	NA	C	coding	1118	3357	75	3431	35.0	0	True	ATTAAA	-18
PB.11349.12	chr8	-	6388	2	incomplete-splice_match	ZFAT	ENST00000517307.5	866	8	29278	14286	64	-14286	internal_fragment	FALSE	canonical	1	199412	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	88	267	252	518	90.0	5	True	NA	NA
PB.5436.2	chr18	+	4368	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	131	1332	-46	-1332	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	79	3435	85.0	-4	True	NA	NA
PB.526.4	chr1	-	2447	12	novel_not_in_catalog	GBP5	novel	4112	4	NA	NA	-83	1	any annotated donor/acceptor	FALSE	canonical	1	73647	junction_11	189355.65575453878	NA	0	NA	TRUE	NA	NA	NA	B	coding	586	1761	564	2324	45.0	-1	True	AATAAA	-27
PB.7065.11	chr2	+	3055	3	novel_not_in_catalog	ARMC9	novel	2300	21	NA	NA	54	-11107	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	coding	134	405	2043	2447	90.0	-4444	False	NA	NA
PB.8998.3	chr4	+	4397	9	full-splice_match	ELMOD2	ENST00000323570.7	4409	9	15	-3	5	3	multi-exon	FALSE	canonical	1	136508	junction_1	38017.51230333693	NA	1	NA	TRUE	NA	NA	NA	C	coding	269	810	190	999	20.0	5	True	AATAAA	-21
PB.7065.10	chr2	+	3672	20	novel_not_in_catalog	ARMC9	novel	2300	21	NA	NA	54	6659	any annotated donor/acceptor	FALSE	canonical	1	344	junction_19	56821.67273174242	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1818	291	2108	20.0	-4444	False	AATACA	-21
PB.197.12	chr1	+	2231	4	novel_in_catalog	HMGN2	novel	320	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	3908	junction_3	47699.354342241015	NA	2	NA	TRUE	NA	NA	NA	C	coding	177	534	1	534	15.0	-727	False	AATAAA	-22
PB.4940.1	chr17	+	743	6	full-splice_match	PSMB3	ENST00000619426.4	773	6	23	7	-5	-1	multi-exon	FALSE	canonical	1	688427	junction_5	1001249.9951050387	NA	0	NA	TRUE	NA	NA	NA	A	coding	194	585	102	686	10.0	-2	True	AATAAA	-15
PB.7507.1	chr21	-	2265	4	full-splice_match	RCAN1	ENST00000381132.6	2408	4	139	4	0	-4	multi-exon	FALSE	canonical	1	253402	junction_3	102678.03177246176	NA	0	NA	TRUE	NA	NA	NA	C	coding	197	594	76	669	30.0	-3	True	AATAAA	-24
PB.5436.7	chr18	+	4389	16	novel_not_in_catalog	DSG2	novel	5831	15	NA	NA	-29	-1332	any annotated donor/acceptor	FALSE	canonical	1	4503	junction_1	148518.0033445403	NA	0	NA	TRUE	NA	NA	NA	C	coding	940	2823	634	3456	85.0	13	True	NA	NA
PB.5750.15	chr19	-	1522	7	incomplete-splice_match	MAN2B1	ENST00000466794.5	3685	22	-31	14216	20	120	3prime_fragment	FALSE	canonical	1	612805	junction_2	94842.24890267347	NA	0	NA	TRUE	NA	NA	NA	C	coding	404	1215	14	1228	100.0	27	True	NA	NA
PB.5436.6	chr18	+	5383	16	novel_not_in_catalog	DSG2	novel	5831	15	NA	NA	-38	-158	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	120662.66730175217	NA	0	NA	TRUE	NA	NA	NA	C	coding	1118	3357	71	3427	20.0	4	True	AATAAA	-17
PB.12132.8	chrX	-	1895	7	incomplete-splice_match	ZMYM3	ENST00000314425.9	5536	25	-34	9577	-34	0	3prime_fragment	FALSE	canonical	1	180294	junction_6	52758.6612597085	NA	0	NA	TRUE	NA	NA	NA	C	coding	495	1488	166	1653	10.0	-35	True	NA	NA
PB.5436.5	chr18	+	5691	15	full-splice_match	DSG2	ENST00000261590.12	5831	15	137	3	-40	-3	multi-exon	FALSE	canonical	1	255528	junction_1	72066.26540050143	NA	1	NA	TRUE	NA	NA	NA	C	coding	1118	3357	73	3429	25.0	2	True	NA	NA
PB.12132.1	chrX	-	5527	25	novel_in_catalog	ZMYM3	novel	5536	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	18580	junction_24	76704.90061917988	NA	24	NA	TRUE	NA	NA	NA	C	coding	1370	4113	123	4235	5.0	692	False	AATAAA	-15
PB.5419.16	chr18	+	3265	19	full-splice_match	RBBP8	ENST00000399722.6	3293	19	41	-13	-9	13	multi-exon	FALSE	canonical	1	48395	junction_1	71358.14852439942	NA	0	NA	TRUE	NA	NA	NA	C	coding	897	2694	311	3004	10.0	0	True	AATACA	-31
PB.12132.3	chrX	-	5477	25	novel_not_in_catalog	ZMYM3	novel	5536	25	NA	NA	-136	0	any annotated donor/acceptor	FALSE	canonical	1	21910	junction_24	76247.19578612884	NA	0	NA	TRUE	NA	NA	NA	C	coding	1370	4113	73	4185	5.0	-23	True	AATAAA	-15
PB.12132.2	chrX	-	5543	25	novel_in_catalog	ZMYM3	novel	5536	25	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	1	33405	junction_11	68210.25822528252	NA	0	NA	TRUE	NA	NA	NA	C	coding	1358	4077	175	4251	5.0	-44	True	AATAAA	-15
PB.10797.5	chr7	+	3532	5	novel_in_catalog	TES	novel	2782	7	NA	NA	4	-2	intron_retention	FALSE	canonical	1	25728	junction_1	386943.89537591557	NA	0	NA	TRUE	NA	NA	NA	C	coding	295	888	1346	2233	30.0	-6	True	AATAAA	-15
PB.7638.16	chr22	-	1473	8	full-splice_match	MAPK1	ENST00000398822.7	1487	8	17	-3	17	3	multi-exon	FALSE	canonical	1	512215	junction_7	119299.87683726984	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	224	1306	35.0	-19	True	ATTAAA	-17
PB.12132.7	chrX	-	5439	25	novel_not_in_catalog	ZMYM3	novel	5536	25	NA	NA	-135	-1	any annotated donor/acceptor	FALSE	canonical	1	21910	junction_24	83210.27928449806	NA	0	NA	TRUE	NA	NA	NA	C	coding	1358	4077	72	4148	5.0	-22	True	AATAAA	-14
PB.12132.6	chrX	-	5540	25	full-splice_match	ZMYM3	ENST00000314425.9	5536	25	-5	1	-5	-1	multi-exon	FALSE	canonical	1	98272	junction_11	59216.97702117224	NA	0	NA	TRUE	NA	NA	NA	C	coding	1370	4113	137	4249	5.0	-6	True	AATAAA	-14
PB.11270.10	chr8	-	3423	8	novel_not_in_catalog	RNF19A	novel	4330	11	NA	NA	-1693	-3	any annotated donor/acceptor	FALSE	canonical	1	29	junction_7	165978.71068646983	NA	0	NA	TRUE	NA	NA	NA	C	coding	569	1710	221	1930	15.0	-1932	False	AATAAA	-21
PB.8561.2	chr3	-	1375	9	novel_not_in_catalog	ALG3	novel	1452	8	NA	NA	3	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	299271.4688138252	NA	0	NA	TRUE	NA	NA	NA	B	coding	403	1212	75	1286	30.0	15	True	AATAAA	-14
PB.11270.15	chr8	-	4376	11	novel_not_in_catalog	RNF19A	novel	4330	11	NA	NA	-38	-8	intron_retention	FALSE	canonical	1	2458	junction_10	174023.80536857594	NA	1	1	TRUE	NA	NA	NA	C	coding	807	2424	465	2888	5.0	-6	True	AATAAA	-16
PB.11270.14	chr8	-	4388	10	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-61	-8	intron_retention	FALSE	canonical	1	3707	junction_9	147184.05137567734	NA	0	NA	TRUE	NA	NA	NA	C	coding	807	2424	477	2900	5.0	3869	False	AATAAA	-16
PB.7507.2	chr21	-	2100	4	full-splice_match	RCAN1	ENST00000381132.6	2408	4	140	168	1	-168	multi-exon	FALSE	canonical	1	253402	junction_3	102678.03177246176	NA	1	NA	TRUE	NA	NA	NA	C	coding	197	594	75	668	25.0	-2	True	ATTAAA	-42
PB.11270.16	chr8	-	3685	11	novel_not_in_catalog	RNF19A	novel	4330	11	NA	NA	22	-8	any annotated donor/acceptor	FALSE	canonical	1	37	junction_8	183621.7831942605	NA	0	NA	TRUE	NA	NA	NA	C	coding	528	1587	611	2197	5.0	3330	False	AATAAA	-16
PB.11270.19	chr8	-	7015	8	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	117	-9	intron_retention	FALSE	canonical	1	178962	junction_7	115017.5256775227	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	4410	5528	5.0	3425	False	AATAAA	-15
PB.11270.18	chr8	-	4659	9	novel_in_catalog	RNF19A	novel	4330	11	NA	NA	-43	-9	intron_retention	FALSE	canonical	1	178962	junction_8	108883.97520066945	NA	2	NA	TRUE	NA	NA	NA	C	coding	397	1194	1979	3172	5.0	-11	True	AATAAA	-15
PB.1219.5	chr1	-	4368	19	novel_not_in_catalog	LYST	novel	13480	53	NA	NA	-3001	4	intron_retention	FALSE	canonical	1	3912	junction_3	53054.78933245434	NA	2	NA	TRUE	NA	NA	NA	C	coding	659	1980	244	2223	30.0	NA	False	AATAAA	-18
PB.8352.5	chr3	+	3184	6	novel_in_catalog	PDIA5	novel	722	6	NA	NA	51615	48904	no_combination_of_known_junctions	FALSE	canonical	1	2459	junction_1	73245.11907997692	NA	1	NA	TRUE	NA	NA	NA	C	coding	237	714	62	775	30.0	-4	True	TATAAA	-13
PB.4656.3	chr17	+	2972	18	novel_not_in_catalog	RPA1	novel	577	6	NA	NA	-5	539	any annotated donor/acceptor	FALSE	canonical	1	1793	junction_5	349596.6261701578	NA	2	NA	TRUE	NA	NA	NA	C	coding	647	1944	129	2072	35.0	3	True	AATAAA	-27
PB.9055.8	chr4	+	1913	5	full-splice_match	MSMO1	ENST00000393766.6	1789	5	4	-128	4	-3	multi-exon	FALSE	canonical	1	58251	junction_1	441853.07011183025	NA	0	NA	TRUE	NA	NA	NA	C	coding	162	489	214	702	35.0	-30	True	ATTAAA	-15
PB.9055.9	chr4	+	1866	1	novel_in_catalog	MSMO1	novel	2269	6	NA	NA	-12	-4051	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-11	True	NA	NA
PB.9055.6	chr4	+	1601	5	full-splice_match	MSMO1	ENST00000504317.1	1026	5	-31	-544	4	544	multi-exon	FALSE	canonical	1	591155	junction_1	151451.30454126172	NA	0	NA	TRUE	NA	NA	NA	C	coding	229	690	107	796	20.0	-30	True	AATAAA	-19
PB.4656.4	chr17	+	2820	17	full-splice_match	RPA1	ENST00000254719.9	4340	17	39	1481	39	537	multi-exon	FALSE	canonical	1	479435	junction_1	227483.41964057751	NA	4	NA	TRUE	NA	NA	NA	C	coding	616	1851	72	1922	30.0	18	True	AATAAA	-25
PB.10797.2	chr7	+	2690	6	novel_in_catalog	TES	novel	2782	7	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	25728	junction_1	352978.7997301821	NA	5	NA	TRUE	NA	NA	NA	C	coding	336	1011	381	1391	30.0	-798	False	AATAAA	-15
PB.7638.11	chr22	-	5066	9	full-splice_match	MAPK1	ENST00000215832.10	11022	9	-18	5974	-18	3510	multi-exon	FALSE	canonical	1	512215	junction_8	125647.88117891205	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	208	1290	30.0	-3	True	TATAAA	-13
PB.9055.2	chr4	+	2183	6	novel_in_catalog	MSMO1	novel	2269	6	NA	NA	81	42	combination_of_known_junctions	FALSE	canonical	1	41098	junction_1	403666.0403731778	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	177	1058	20.0	-89	False	AATAAA	-18
PB.3684.1	chr14	+	3241	4	full-splice_match	TRMT61A	ENST00000389749.8	3229	4	-14	2	-14	-2	multi-exon	FALSE	canonical	1	158823	junction_1	38627.38619454107	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	122	991	30.0	-26	True	ATTAAA	-17
PB.3684.2	chr14	+	2203	4	full-splice_match	TRMT61A	ENST00000389749.8	3229	4	-2	1028	-2	-1028	multi-exon	FALSE	canonical	1	158823	junction_1	38627.38619454107	NA	0	NA	TRUE	NA	NA	NA	C	coding	289	870	110	979	15.0	-14	True	AATAAA	-16
PB.4656.5	chr17	+	2978	18	novel_not_in_catalog	RPA1	novel	577	6	NA	NA	18	533	any annotated donor/acceptor	FALSE	canonical	1	2565	junction_5	349498.99411217007	NA	4	NA	TRUE	NA	NA	NA	C	coding	663	1992	93	2084	25.0	-3	True	AATAAA	-21
PB.4216.1	chr16	-	3547	29	novel_in_catalog	PAM16	novel	493	6	NA	NA	-61010	-9253	no_combination_of_known_junctions	TRUE	canonical	1	12921	junction_13	92350.10809292813	NA	1	NA	TRUE	NA	NA	NA	B	coding	535	1608	100	1707	5.0	9	False	ATTAAA	-17
PB.4216.2	chr16	-	3987	27	novel_in_catalog	PAM16	novel	493	6	NA	NA	-60991	-9254	intron_retention	FALSE	canonical	1	221061	junction_26	54790.84661165218	NA	0	NA	TRUE	NA	NA	NA	B	coding	548	1647	81	1727	5.0	-3	True	ATTAAA	-16
PB.4216.3	chr16	-	3470	28	full-splice_match	CORO7	ENST00000251166.8	3540	28	68	2	0	0	multi-exon	FALSE	canonical	1	181794	junction_12	58841.75306575979	NA	0	NA	TRUE	NA	NA	NA	A	coding	925	2778	79	2856	5.0	-1	True	ATTAAA	-16
PB.4216.4	chr16	-	3162	23	novel_not_in_catalog	CORO7-PAM16	novel	3284	31	NA	NA	-9	-17900	intron_retention	FALSE	canonical	1	7162	junction_1	83494.4705648274	NA	0	NA	TRUE	NA	NA	NA	B	coding	548	1647	79	1725	30.0	-1	True	NA	NA
PB.4216.5	chr16	-	2388	10	novel_not_in_catalog	CORO7-PAM16	novel	3284	31	NA	NA	-7	-42442	any annotated donor/acceptor	FALSE	canonical	1	4578	junction_1	100711.89334169593	NA	1	NA	TRUE	NA	NA	NA	B	coding	293	882	77	958	55.0	1	True	AATAAA	-36
PB.6845.5	chr2	-	3899	7	full-splice_match	SP3	ENST00000310015.10	6359	7	388	2072	-4	-1	multi-exon	FALSE	canonical	1	79066	junction_5	148885.0200823329	NA	1	NA	TRUE	NA	NA	NA	C	coding	781	2346	144	2489	15.0	554	False	AATAAA	-22
PB.746.18	chr1	-	3269	11	novel_in_catalog	PI4KB	novel	3934	11	NA	NA	0	0	no_combination_of_known_junctions	FALSE	canonical	1	1274	junction_7	235371.93228804914	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	372	2549	15.0	-12	True	AATAAA	-15
PB.691.1	chr1	+	1901	3	incomplete-splice_match	NBPF12	ENST00000579935.8	5035	25	32881	108	32881	-3	5prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	75	228	159	386	15.0	NA	False	ATTAAA	-13
PB.6845.2	chr2	-	3376	5	novel_not_in_catalog	SP3	novel	6359	7	NA	NA	-45	-1	any annotated donor/acceptor	FALSE	canonical	1	14067	junction_1	164014.9586019138	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	697	1881	35.0	-1	True	ACTAAA	-18
PB.6845.3	chr2	-	4106	7	full-splice_match	SP3	ENST00000310015.10	6359	7	400	1853	8	218	multi-exon	FALSE	canonical	1	79066	junction_5	148885.0200823329	NA	1	NA	TRUE	NA	NA	NA	C	coding	781	2346	132	2477	40.0	566	False	AATAAA	-7
PB.1252.4	chr1	+	3027	6	full-splice_match	TRIM58	ENST00000366481.3	3225	6	-11	209	-11	-209	multi-exon	FALSE	canonical	1	139727	junction_5	119888.72764259366	NA	7	NA	TRUE	NA	NA	NA	C	coding	486	1461	60	1520	75.0	1	True	NA	NA
PB.8352.3	chr3	+	3247	7	novel_not_in_catalog	PDIA5	novel	722	6	NA	NA	51603	49001	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	86324.95303792525	NA	2	NA	TRUE	NA	NA	NA	C	coding	236	711	77	787	55.0	-16	True	AAAAAG	-15
PB.3155.5	chr13	-	1972	10	novel_in_catalog	SUCLA2	novel	3317	14	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	1	7860	junction_9	206405.36766437703	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	270	1259	10.0	-1	True	AATAAA	-14
PB.10797.3	chr7	+	1517	6	incomplete-splice_match	TES	ENST00000358204.8	2782	7	30	6052	-16	-7	3prime_fragment	FALSE	canonical	1	545445	junction_4	146200.99837826006	NA	0	NA	TRUE	NA	NA	NA	C	coding	405	1218	186	1403	55.0	-26	True	AATAAA	-11
PB.8352.2	chr3	+	3400	7	full-splice_match	SEC22A	ENST00000492595.5	972	7	-3	-2425	-3	17	multi-exon	FALSE	canonical	1	86962	junction_1	37167.96157833906	NA	3	NA	TRUE	NA	NA	NA	C	coding	307	924	52	975	15.0	-3	True	TATAAA	-29
PB.11615.4	chr9	+	2194	9	full-splice_match	PSAT1	ENST00000376588.3	2188	9	-7	1	-7	-1	multi-exon	FALSE	canonical	1	200350	junction_2	96140.65168803465	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	76	1188	25.0	-24	False	ATTAAA	-16
PB.11615.5	chr9	+	1902	8	full-splice_match	PSAT1	ENST00000347159.6	1411	8	2	-493	2	-146	multi-exon	FALSE	canonical	1	54719	junction_7	141394.3144011795	NA	0	NA	TRUE	NA	NA	NA	C	coding	324	975	67	1041	15.0	-15	False	ATTAAA	-21
PB.8778.1	chr4	-	3105	4	novel_not_in_catalog	SCFD2	novel	3176	9	NA	NA	26	-2901	intron_retention	FALSE	canonical	1	2765	junction_1	102119.28604768489	NA	2	NA	TRUE	NA	NA	NA	B	coding	403	1212	95	1306	85.0	25	True	NA	NA
PB.9441.1	chr5	-	3055	17	novel_not_in_catalog	KIF3A	novel	6325	17	NA	NA	68	3814	any annotated donor/acceptor	FALSE	canonical	1	6332	junction_1	73475.08709919557	NA	16	2	TRUE	NA	NA	NA	B	coding	697	2094	86	2179	40.0	0	True	AATAAA	-16
PB.8778.2	chr4	-	2468	2	novel_not_in_catalog	SCFD2	novel	3176	9	NA	NA	-3	-10556	intron_retention	FALSE	non_canonical	0	0	junction_1	0.0	NA	3	NA	FALSE	NA	NA	NA	B	coding	313	942	129	1070	90.0	-9	True	NA	NA
PB.5353.3	chr17	+	1676	6	full-splice_match	FN3KRP	ENST00000269373.10	1849	6	58	115	-8	-115	multi-exon	FALSE	canonical	1	230963	junction_3	92464.48933379776	NA	1	NA	TRUE	NA	NA	NA	C	coding	309	930	16	945	15.0	2	True	ATTAAA	-16
PB.5353.2	chr17	+	3887	6	novel_in_catalog	FN3KRP	novel	1849	6	NA	NA	9	-4	intron_retention	FALSE	canonical	1	7595	junction_3	217534.5767317003	NA	4	NA	TRUE	NA	NA	NA	C	coding	133	402	2644	3045	30.0	-8	True	AATAAA	-45
PB.5353.1	chr17	+	1804	6	full-splice_match	FN3KRP	ENST00000269373.10	1849	6	41	4	2	-4	multi-exon	TRUE	canonical	1	230963	junction_3	92464.48933379776	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	33	962	30.0	-15	True	AATAAA	-45
PB.11322.3	chr8	-	2972	7	novel_in_catalog	DERL1	novel	3340	8	NA	NA	-49	-184	no_combination_of_known_junctions	FALSE	canonical	1	15916	junction_6	330618.27280499117	NA	1	NA	TRUE	NA	NA	NA	C	coding	151	456	418	873	20.0	1	True	ATTAAA	-13
PB.10865.10	chr7	-	2532	11	full-splice_match	CNOT4	ENST00000315544.6	3783	11	-7	1258	-7	-1258	multi-exon	FALSE	canonical	1	52290	junction_4	66201.47488394802	NA	1	NA	TRUE	NA	NA	NA	C	coding	575	1728	339	2066	25.0	-33	False	TATAAA	-5
PB.10865.11	chr7	-	2310	11	full-splice_match	CNOT4	ENST00000428680.6	4642	11	-26	2358	-11	-1439	multi-exon	FALSE	canonical	1	61643	junction_1	59474.834064921946	NA	0	NA	TRUE	NA	NA	NA	C	coding	572	1719	307	2025	25.0	-1	True	AATAAA	-29
PB.4260.5	chr16	+	8953	18	novel_in_catalog	MRTFB	novel	545	5	NA	NA	-6	1	intron_retention	FALSE	canonical	1	16945	junction_2	40716.17554566912	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	324	3623	20.0	11	True	AATAAA	-17
PB.4260.4	chr16	+	5048	17	full-splice_match	MRTFB	ENST00000571589.5	8799	17	0	3751	0	580	multi-exon	FALSE	canonical	1	22429	junction_1	31736.71771134885	NA	0	NA	TRUE	NA	NA	NA	C	coding	1099	3300	173	3472	10.0	0	True	NA	NA
PB.4260.3	chr16	+	8808	17	full-splice_match	MRTFB	ENST00000571589.5	8799	17	-2	-7	-1	5	multi-exon	FALSE	canonical	1	22429	junction_1	31736.71771134885	NA	2	NA	TRUE	NA	NA	NA	C	coding	1099	3300	175	3474	25.0	-2	True	AATAAA	-21
PB.4260.2	chr16	+	4810	17	full-splice_match	MRTFB	ENST00000571589.5	8799	17	-2	3991	-1	340	multi-exon	FALSE	canonical	1	22429	junction_1	31736.71771134885	NA	1	NA	TRUE	NA	NA	NA	C	coding	1099	3300	175	3474	75.0	-2	True	NA	NA
PB.4260.1	chr16	+	4922	16	novel_in_catalog	MRTFB	novel	545	5	NA	NA	-11	580	intron_retention	TRUE	canonical	1	8138	junction_14	38975.92827009455	NA	5	2	TRUE	NA	NA	NA	C	coding	1053	3162	185	3346	10.0	-12	True	NA	NA
PB.8309.6	chr3	+	3745	8	novel_not_in_catalog	QTRT2	novel	680	5	NA	NA	-11	-5	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	59422.161434527276	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	427	1305	30.0	-11	True	AATAAA	-15
PB.5472.1	chr18	-	2283	4	full-splice_match	SMAD7	ENST00000262158.7	4428	4	2136	9	508	-9	multi-exon	FALSE	canonical	1	132175	junction_2	21601.13350420914	NA	1	NA	TRUE	NA	NA	NA	A	coding	211	636	138	773	20.0	3270	False	ATTAAA	-15
PB.550.2	chr1	-	2619	7	full-splice_match	GCLM	ENST00000370238.7	4857	7	-46	2284	0	-455	multi-exon	FALSE	canonical	1	171114	junction_6	130124.8177323945	NA	0	NA	TRUE	NA	NA	NA	C	coding	274	825	294	1118	75.0	-1	True	NA	NA
PB.10673.8	chr7	-	9973	8	full-splice_match	CDK6	ENST00000424848.2	1465	8	-18	-8490	-18	-1729	multi-exon	FALSE	canonical	1	138387	junction_7	63578.93496485535	NA	1	NA	TRUE	NA	NA	NA	C	coding	326	981	503	1483	70.0	7	True	AATAGA	-16
PB.7225.20	chr20	+	1691	10	novel_in_catalog	HM13	novel	3810	13	NA	NA	12	0	no_combination_of_known_junctions	FALSE	canonical	1	21924	junction_1	860463.3202085065	NA	1	NA	TRUE	NA	NA	NA	C	coding	149	450	920	1369	10.0	1	True	ATTAAA	-16
PB.11322.6	chr8	-	2254	8	full-splice_match	DERL1	ENST00000259512.8	3340	8	101	985	-20	0	multi-exon	FALSE	canonical	1	694348	junction_6	99855.87101335972	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	201	956	25.0	30	False	AATAAA	-15
PB.10211.21	chr6	-	3357	20	full-splice_match	EPB41L2	ENST00000337057.7	4457	20	72	1028	1	1	multi-exon	FALSE	canonical	1	156605	junction_7	160860.36086928696	NA	0	NA	TRUE	NA	NA	NA	C	coding	1005	3018	111	3128	25.0	-6	True	AATATA	-25
PB.7638.12	chr22	-	2968	9	full-splice_match	MAPK1	ENST00000215832.10	11022	9	-30	8084	21	1400	multi-exon	FALSE	canonical	1	512215	junction_8	125647.88117891205	NA	0	NA	TRUE	NA	NA	NA	C	coding	360	1083	220	1302	25.0	-15	True	AATAAA	-25
PB.1826.1	chr11	+	5854	1	genic	TEAD1	novel	NA	NA	NA	NA	59412	225	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	4	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	75.0	-4019	False	NA	NA
PB.1826.2	chr11	+	3577	1	incomplete-splice_match	TEAD1	ENST00000526600.1	8477	8	60926	538	60926	-538	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	-2505	False	AGTAAA	-30
PB.1826.3	chr11	+	4291	1	genic	TEAD1	novel	NA	NA	NA	NA	61006	256	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-2425	False	AATAAA	-23
PB.1826.4	chr11	+	2894	1	incomplete-splice_match	TEAD1	ENST00000526600.1	8477	8	61609	538	61609	-538	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	65.0	-1822	False	AGTAAA	-30
PB.1826.5	chr11	+	2623	1	genic	TEAD1	novel	NA	NA	NA	NA	62671	253	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	7	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-760	False	AATAAA	-20
PB.1826.6	chr11	+	1451	1	genic	TEAD1	novel	NA	NA	NA	NA	63839	249	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	408	False	AATAAA	-16
PB.9161.1	chr5	-	4025	2	full-splice_match	AC008825.1	ENST00000504398.1	452	2	-1355	-2218	-1355	2218	multi-exon	FALSE	canonical	1	961	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	125	378	1020	1397	75.0	-1320	False	NA	NA
PB.1737.1	chr11	-	1620	1	genic	AC136475.2	novel	NA	NA	NA	NA	-9	608	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	134	405	214	618	10.0	9696	False	NA	NA
PB.12294.1	chrX	+	1925	4	novel_not_in_catalog	AL390879.1	novel	2222	4	NA	NA	14	889	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	5188.790803260428	NA	1	1	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	35.0	-34	True	NA	NA
PB.8075.2	chr3	-	8912	22	novel_not_in_catalog	SETD2	novel	7555	19	NA	NA	-163	-24	intron_retention	FALSE	non_canonical	0	0	junction_21	159208.52183398462	NA	5	1	TRUE	NA	NA	NA	B	coding	2014	6045	334	6378	75.0	-18	True	NA	NA
PB.1046.6	chr1	-	2467	10	novel_not_in_catalog	CHI3L1	novel	1920	2	NA	NA	45	0	intron_retention	FALSE	canonical	1	12497	junction_3	370677.1044775716	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	82	822	0.0	-2	True	AATAAA	-20
PB.1046.7	chr1	-	2338	9	novel_in_catalog	CHI3L1	novel	1920	2	NA	NA	46	0	intron_retention	FALSE	canonical	1	642296	junction_2	153540.9858791273	NA	0	NA	TRUE	NA	NA	NA	C	coding	305	918	81	998	0.0	-1	True	AATAAA	-20
PB.2678.8	chr12	-	4331	25	novel_in_catalog	PAN2	novel	5372	26	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	39798	junction_1	75641.34876093407	NA	1	NA	TRUE	NA	NA	NA	C	coding	1132	3399	261	3659	30.0	-20	True	AATAAA	-28
PB.2678.9	chr12	-	5085	23	novel_in_catalog	PAN2	novel	5372	26	NA	NA	7	0	intron_retention	FALSE	canonical	1	163270	junction_21	65742.81358647901	NA	0	NA	TRUE	NA	NA	NA	C	coding	707	2124	253	2376	30.0	-12	True	AATAAA	-28
PB.1046.2	chr1	-	2975	9	novel_not_in_catalog	CHI3L1	novel	1920	2	NA	NA	46	0	intron_retention	FALSE	canonical	1	12497	junction_2	393065.4055481535	NA	0	NA	TRUE	NA	NA	NA	C	coding	246	741	81	821	0.0	-1	True	AATAAA	-20
PB.1046.3	chr1	-	3021	7	novel_in_catalog	CHI3L1	novel	1920	2	NA	NA	47	0	intron_retention	FALSE	canonical	1	694028	junction_4	117593.41263969679	NA	0	NA	TRUE	NA	NA	NA	C	coding	263	792	80	871	0.0	0	True	AATAAA	-20
PB.1046.1	chr1	-	3675	7	novel_in_catalog	CHI3L1	novel	1920	2	NA	NA	2	0	intron_retention	FALSE	canonical	1	694028	junction_4	144827.940432777	NA	5	NA	TRUE	NA	NA	NA	C	coding	105	318	125	442	0.0	-2	True	AATAAA	-20
PB.2678.2	chr12	-	4996	24	novel_in_catalog	PAN2	novel	5372	26	NA	NA	15	4	intron_retention	TRUE	canonical	1	129264	junction_11	69180.54633481412	NA	0	NA	TRUE	NA	NA	NA	C	coding	850	2553	292	2844	15.0	8458	False	AATAAA	-35
PB.2678.3	chr12	-	4584	26	novel_not_in_catalog	PAN2	novel	5372	26	NA	NA	9	2	any annotated donor/acceptor	FALSE	canonical	1	2792	junction_19	84298.08057838565	NA	0	NA	TRUE	NA	NA	NA	C	coding	1228	3687	221	3907	20.0	20	True	AATAAA	-33
PB.2678.1	chr12	-	4487	26	full-splice_match	PAN2	ENST00000610546.4	5301	26	65	749	-7	-25	multi-exon	FALSE	canonical	1	33885	junction_13	78314.19954050734	NA	0	NA	TRUE	NA	NA	NA	C	coding	1202	3609	242	3850	70.0	-1	True	TTTAAA	-27
PB.2678.6	chr12	-	5058	24	novel_not_in_catalog	PAN2	novel	5372	26	NA	NA	3	0	intron_retention	FALSE	canonical	1	10448	junction_19	84121.9489878597	NA	5	NA	TRUE	NA	NA	NA	C	coding	576	1731	1180	2910	25.0	-16	True	AATAAA	-31
PB.2678.7	chr12	-	4823	25	novel_in_catalog	PAN2	novel	5372	26	NA	NA	7	-1	intron_retention	FALSE	canonical	1	87765	junction_13	73430.80779304344	NA	0	NA	TRUE	NA	NA	NA	C	coding	849	2550	253	2802	25.0	-12	True	AATAAA	-30
PB.2678.4	chr12	-	4475	26	full-splice_match	PAN2	ENST00000440411.7	4576	26	65	36	-7	-25	multi-exon	FALSE	canonical	1	129264	junction_13	70071.21870040508	NA	0	NA	TRUE	NA	NA	NA	C	coding	1198	3597	242	3838	70.0	-1	True	TTTAAA	-27
PB.2678.5	chr12	-	5060	24	novel_not_in_catalog	PAN2	novel	5372	26	NA	NA	10	0	intron_retention	FALSE	canonical	1	10448	junction_19	80729.41235511545	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	1173	2474	25.0	-9	True	AATAAA	-31
PB.5587.2	chr19	+	3839	25	novel_not_in_catalog	DOT1L	novel	7436	28	NA	NA	-2	-687	any annotated donor/acceptor	FALSE	canonical	0	0	junction_20	61937.41911295032	NA	1	1	TRUE	NA	NA	NA	C	coding	801	2406	3	2408	55.0	-2	True	GATAAA	-16
PB.5587.1	chr19	+	4875	28	full-splice_match	DOT1L	ENST00000398665.7	7436	28	-9	2570	-9	-686	multi-exon	TRUE	canonical	1	141829	junction_1	42565.14619289468	NA	0	NA	TRUE	NA	NA	NA	C	coding	1537	4614	46	4659	55.0	-4	True	GATAAA	-17
PB.9558.6	chr5	+	4887	21	novel_not_in_catalog	HMGXB3	novel	5567	21	NA	NA	9	-9	intron_retention	FALSE	non_canonical	0	0	junction_20	112102.62400256294	NA	3	NA	TRUE	NA	NA	NA	C	coding	1292	3879	456	4334	20.0	-12	True	AATAAA	-19
PB.6368.1	chr2	+	3083	18	incomplete-splice_match	TMEM214	ENST00000435172.6	2775	19	8	-27	8	0	intron_retention	TRUE	canonical	1	24647	junction_9	226967.78995105546	NA	1	NA	TRUE	NA	NA	NA	C	coding	387	1164	55	1218	15.0	-42	True	AATAAA	-20
PB.8735.10	chr4	-	3496	5	novel_not_in_catalog	TLR1	novel	619	4	NA	NA	-164	9	any annotated donor/acceptor	FALSE	canonical	1	1471	junction_4	27777.074867370393	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	939	3299	45.0	-3	True	ATTAAA	-29
PB.11741.6	chr9	+	1527	5	full-splice_match	RGS3	ENST00000620489.1	1503	5	-22	-2	-22	2	multi-exon	FALSE	canonical	1	245255	junction_1	72863.88597069196	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	171	749	5.0	-191	False	AATAAA	-20
PB.3915.4	chr15	-	5765	30	incomplete-splice_match	HERC1	ENST00000443617.6	15137	78	-60	85403	-6	2103	3prime_fragment	FALSE	canonical	1	28420	junction_29	35234.30246425616	NA	0	NA	TRUE	NA	NA	NA	B	coding	1872	5616	149	5764	70.0	-1	True	NA	NA
PB.8510.10	chr3	+	2875	9	full-splice_match	MYNN	ENST00000356716.8	2833	9	-39	-3	-17	3	multi-exon	FALSE	canonical	1	52573	junction_2	72394.77100322492	NA	0	NA	TRUE	NA	NA	NA	C	coding	610	1833	174	2006	50.0	-17	True	AATAAA	-14
PB.6226.10	chr19	+	2487	12	novel_not_in_catalog	U2AF2	novel	3022	12	NA	NA	-30	0	intron_retention	FALSE	canonical	1	111914	junction_5	886439.0242678431	NA	0	NA	TRUE	NA	NA	NA	C	coding	306	921	920	1840	15.0	-4	True	ATTAAA	-22
PB.3915.1	chr15	-	7608	38	novel_in_catalog	HERC1	novel	15137	78	NA	NA	-47	-9	intron_retention	FALSE	canonical	1	22619	junction_37	37581.4249534789	NA	3	NA	TRUE	NA	NA	NA	B	coding	2471	7413	195	7607	65.0	-1	True	NA	NA
PB.3915.3	chr15	-	6163	33	incomplete-splice_match	HERC1	ENST00000443617.6	15137	78	-60	81004	-6	6502	3prime_fragment	FALSE	canonical	1	28420	junction_32	34769.62865817442	NA	0	NA	TRUE	NA	NA	NA	B	coding	2005	6015	149	6163	70.0	-1	True	NA	NA
PB.3915.2	chr15	-	6846	37	novel_in_catalog	HERC1	novel	15137	78	NA	NA	0	-3475	combination_of_known_junctions	FALSE	canonical	1	22619	junction_36	37948.474636172024	NA	13	1	TRUE	NA	NA	NA	B	coding	2233	6699	148	6846	65.0	5	True	NA	NA
PB.11722.1	chr9	-	7234	14	full-splice_match	PTBP3	ENST00000374257.5	7240	14	2	4	-1	-4	multi-exon	FALSE	canonical	1	259769	junction_12	122928.3672971026	NA	3	NA	TRUE	NA	NA	NA	C	coding	524	1575	248	1822	20.0	-47	False	AATAAA	-24
PB.6368.5	chr2	+	3154	17	novel_in_catalog	TMEM214	novel	804	3	NA	NA	19	-1	intron_retention	FALSE	canonical	1	24647	junction_8	233240.38599645934	NA	0	NA	TRUE	NA	NA	NA	C	coding	314	945	1361	2305	15.0	-8	True	AATAAA	-13
PB.8683.2	chr4	+	3256	8	full-splice_match	WFS1	ENST00000226760.5	3640	8	1	383	1	-1	multi-exon	FALSE	canonical	1	100766	junction_1	75401.34233363679	NA	0	NA	TRUE	NA	NA	NA	C	coding	890	2673	170	2842	25.0	-1	True	TTTAAA	-28
PB.8683.3	chr4	+	2396	6	novel_not_in_catalog	WFS1	novel	3255	8	NA	NA	2	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	98816.82500991417	NA	1	1	TRUE	NA	NA	NA	C	coding	604	1815	169	1983	25.0	0	True	TTTAAA	-27
PB.10555.4	chr7	-	1950	8	full-splice_match	PSPH	ENST00000395471.7	2178	8	155	73	-1	-73	multi-exon	FALSE	canonical	1	91389	junction_7	92754.62428496436	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	652	1329	30.0	-6	True	ATTAAA	-16
PB.10555.5	chr7	-	1900	8	novel_not_in_catalog	PSPH	novel	1409	7	NA	NA	2	0	intron_retention	FALSE	canonical	1	803	junction_7	115825.76338357436	NA	1	NA	TRUE	NA	NA	NA	C	coding	225	678	529	1206	30.0	-1	True	AATAAA	-17
PB.10555.2	chr7	-	1989	8	full-splice_match	PSPH	ENST00000275605.7	2131	8	156	-14	0	-2	multi-exon	FALSE	canonical	1	13120	junction_7	112442.19673545104	NA	0	NA	TRUE	NA	NA	NA	C	coding	225	678	603	1280	15.0	-5	True	AATAAA	-32
PB.11741.2	chr9	+	2757	10	incomplete-splice_match	RGS3	ENST00000343817.9	3689	16	16064	1	123	0	5prime_fragment	FALSE	canonical	1	78010	junction_4	129173.0986201686	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	414	1973	5.0	-28	True	AATAAA	-26
PB.11741.3	chr9	+	2586	9	novel_in_catalog	RGS3	novel	4591	26	NA	NA	169	-2	intron_retention	FALSE	canonical	1	2429	junction_3	143822.71244525106	NA	0	NA	TRUE	NA	NA	NA	C	coding	519	1560	245	1804	5.0	18	True	AATAAA	-24
PB.145.19	chr1	-	3613	13	novel_not_in_catalog	HP1BP3	novel	3938	13	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_9	510287.91629946517	NA	6	3	TRUE	NA	NA	NA	C	coding	393	1182	769	1950	85.0	-18	True	NA	NA
PB.3191.9	chr13	-	3763	22	novel_in_catalog	DIS3	novel	10604	21	NA	NA	26	0	intron_retention	FALSE	canonical	1	11989	junction_20	126962.79900196238	NA	1	NA	TRUE	NA	NA	NA	C	coding	796	2391	622	3012	35.0	0	True	AATAAA	-24
PB.4807.5	chr17	+	1887	13	full-splice_match	DRG2	ENST00000395726.8	1897	13	15	-5	-1	-5	multi-exon	FALSE	canonical	1	18493	junction_12	157255.0563476727	NA	1	NA	TRUE	NA	NA	NA	C	coding	343	1032	85	1116	20.0	-8	True	AATAAA	-9
PB.9355.28	chr5	+	3190	29	full-splice_match	CAST	ENST00000309190.9	4282	29	-24	1116	-12	-3	multi-exon	FALSE	canonical	1	273579	junction_1	356679.31591456296	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	179	2239	60.0	-29	True	NA	NA
PB.4807.1	chr17	+	2640	12	novel_not_in_catalog	DRG2	novel	1964	13	NA	NA	13	0	intron_retention	FALSE	canonical	1	4204	junction_9	225722.1316020545	NA	0	NA	TRUE	NA	NA	NA	C	coding	90	273	120	392	25.0	-43	True	AATAAA	-14
PB.4807.2	chr17	+	2579	12	novel_in_catalog	DRG2	novel	1964	13	NA	NA	-11	0	intron_retention	FALSE	canonical	1	316183	junction_1	92483.18582351127	NA	3	NA	TRUE	NA	NA	NA	C	coding	126	381	1468	1848	30.0	-38	True	AATAAA	-16
PB.4807.3	chr17	+	1974	12	novel_in_catalog	DRG2	novel	1964	13	NA	NA	-11	-234	intron_retention	FALSE	canonical	1	316183	junction_1	92483.18582351127	NA	1	1	TRUE	NA	NA	NA	C	coding	126	381	1468	1848	25.0	-38	True	AATACA	-37
PB.1727.2	chr10	+	2580	4	incomplete-splice_match	PAOX	ENST00000357296.7	1633	6	-14	6053	13	5228	3prime_fragment	FALSE	canonical	1	33540	junction_1	22547.73431830544	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	71	1291	15.0	-24	True	NA	NA
PB.1727.3	chr10	+	2095	4	incomplete-splice_match	PAOX	ENST00000357296.7	1633	6	3	6521	3	4760	3prime_fragment	FALSE	canonical	1	33540	junction_1	22547.73431830544	NA	9	NA	TRUE	NA	NA	NA	C	coding	406	1221	54	1274	65.0	-7	True	NA	NA
PB.3191.3	chr13	-	5343	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	-14	5275	-14	-1	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	2	NA	TRUE	NA	NA	NA	C	coding	958	2877	116	2992	95.0	-4	True	NA	NA
PB.1727.1	chr10	+	1871	7	full-splice_match	PAOX	ENST00000278060.9	1858	7	-5	-8	-5	8	multi-exon	TRUE	canonical	1	33540	junction_1	19424.089971533343	NA	0	NA	TRUE	NA	NA	NA	C	coding	511	1536	89	1624	15.0	-8443	False	CATAAA	-25
PB.3191.5	chr13	-	4376	21	full-splice_match	DIS3	ENST00000377767.8	10604	21	-5	6233	-5	642	multi-exon	FALSE	canonical	1	203676	junction_20	86918.94015282285	NA	1	NA	TRUE	NA	NA	NA	C	coding	958	2877	107	2983	35.0	5	True	NA	NA
PB.11974.8	chrX	+	2996	20	novel_in_catalog	OFD1	novel	3611	23	NA	NA	4	-1091	intron_retention	FALSE	canonical	1	29989	junction_3	68828.67560300109	NA	9	NA	TRUE	NA	NA	NA	C	coding	890	2670	327	2996	70.0	1	True	NA	NA
PB.9355.22	chr5	+	3375	31	novel_in_catalog	CAST	novel	864	12	NA	NA	-1	21	intron_retention	FALSE	canonical	1	137170	junction_1	417230.3485880631	NA	1	NA	TRUE	NA	NA	NA	C	coding	753	2262	139	2400	60.0	-1	True	TATAAA	-16
PB.9355.23	chr5	+	3018	31	full-splice_match	CAST	ENST00000508608.5	2425	31	-51	-542	2	1	multi-exon	FALSE	canonical	1	137170	junction_1	387569.27916401677	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	136	2400	25.0	2	True	AATAAA	-38
PB.7496.3	chr21	+	1652	7	full-splice_match	IL10RB	ENST00000290200.6	1963	7	30	281	6	0	multi-exon	FALSE	canonical	1	167613	junction_1	85496.71044484044	NA	0	NA	TRUE	NA	NA	NA	C	coding	325	978	79	1056	100.0	21	True	NA	NA
PB.7496.2	chr21	+	1505	6	full-splice_match	IL10RB	ENST00000422891.5	786	6	-5	-714	-5	0	multi-exon	FALSE	canonical	1	12596	junction_2	155244.54748222238	NA	0	NA	TRUE	NA	NA	NA	C	coding	181	546	364	909	100.0	10	True	NA	NA
PB.2468.1	chr12	-	2984	2	novel_not_in_catalog	PRH1-PRR4	novel	1618	10	NA	NA	-19	-318202	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	2	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-10	True	NA	NA
PB.2021.2	chr11	-	2352	1	novel_in_catalog	TRPT1	novel	941	7	NA	NA	9	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	coding	101	306	1502	1807	70.0	-21	True	AATAAA	-27
PB.10091.16	chr6	-	2996	27	novel_in_catalog	SNX14	novel	3348	26	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	20359	junction_4	132459.17436517728	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	205	2832	25.0	8164	False	AATAAA	-26
PB.10091.15	chr6	-	3278	26	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	11607	junction_3	166946.1029964629	NA	0	NA	TRUE	NA	NA	NA	C	coding	836	2511	200	2710	25.0	-42	True	AATAAA	-26
PB.2021.1	chr11	-	1509	6	novel_in_catalog	TRPT1	novel	865	7	NA	NA	0	-4	intron_retention	FALSE	canonical	1	144708	junction_5	178920.51557202713	NA	0	NA	TRUE	NA	NA	NA	B	coding	107	324	992	1315	70.0	21	True	AATAAA	-27
PB.10091.19	chr6	-	2746	26	novel_in_catalog	SNX14	novel	3348	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	13280	junction_25	166224.4074241036	NA	0	NA	TRUE	NA	NA	NA	C	coding	841	2526	60	2585	40.0	-22	True	AATAAA	-23
PB.10091.18	chr6	-	3005	27	novel_not_in_catalog	SNX14	novel	3348	26	NA	NA	4	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	151277.57703410366	NA	1	1	TRUE	NA	NA	NA	C	coding	587	1764	1081	2844	40.0	-37	True	AATAAA	-23
PB.5759.1	chr19	-	974	6	full-splice_match	PRDX2	ENST00000301522.2	987	6	10	3	10	0	multi-exon	FALSE	canonical	1	1882819	junction_1	948498.4102912562	NA	0	NA	TRUE	NA	NA	NA	C	coding	198	597	120	716	5.0	-1	True	AATAAA	-17
PB.5759.2	chr19	-	2425	5	incomplete-splice_match	PRDX2	ENST00000301522.2	987	6	10	1244	10	-1241	3prime_fragment	FALSE	canonical	1	3332132	junction_3	631004.9182242461	NA	2	NA	TRUE	NA	NA	NA	C	coding	176	531	120	650	85.0	-1	True	NA	NA
PB.852.47	chr1	-	4074	33	full-splice_match	COPA	ENST00000649787.1	4567	33	12	481	1	7	multi-exon	FALSE	canonical	1	1403	junction_15	386527.8532769946	NA	0	NA	TRUE	NA	NA	NA	C	coding	1204	3615	77	3691	70.0	0	True	NA	NA
PB.7304.1	chr20	-	3989	3	novel_not_in_catalog	FITM2	novel	4597	2	NA	NA	-27	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58358.0	NA	6	NA	TRUE	NA	NA	NA	B	coding	262	789	49	837	15.0	5	True	ATTAAA	-26
PB.7304.3	chr20	-	4018	3	novel_not_in_catalog	FITM2	novel	4597	2	NA	NA	-32	-4	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58358.0	NA	11	NA	TRUE	NA	NA	NA	B	coding	262	789	54	842	20.0	0	True	ATTAAA	-23
PB.7304.2	chr20	-	4054	3	novel_not_in_catalog	FITM2	novel	4597	2	NA	NA	-33	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58358.0	NA	2	1	TRUE	NA	NA	NA	B	coding	262	789	55	843	15.0	-1	True	ATTAAA	-25
PB.7304.4	chr20	-	3094	3	novel_not_in_catalog	FITM2	novel	4597	2	NA	NA	-39	-968	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	58358.0	NA	1	1	TRUE	NA	NA	NA	B	coding	262	789	61	849	60.0	-7	True	NA	NA
PB.12095.1	chrX	-	6353	22	full-splice_match	PHF8	ENST00000338154.10	6062	22	-298	7	-298	-1	multi-exon	FALSE	canonical	1	110972	junction_10	42910.262288459606	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3075	804	3878	15.0	-11	True	GATAAA	-16
PB.11857.2	chr9	+	3380	6	full-splice_match	AIF1L	ENST00000247291.7	3364	6	-16	0	-4	0	multi-exon	FALSE	canonical	1	183598	junction_1	61754.28256890367	NA	0	NA	TRUE	NA	NA	NA	C	coding	150	453	105	557	20.0	-5	True	AATAAA	-15
PB.12095.2	chrX	-	4426	22	full-splice_match	PHF8	ENST00000338946.10	4651	22	225	0	113	0	multi-exon	FALSE	canonical	1	64495	junction_1	54664.340299429954	NA	1	NA	TRUE	NA	NA	NA	C	coding	948	2847	281	3127	15.0	-16	True	GATAAA	-17
PB.6990.97	chr2	-	4841	27	novel_not_in_catalog	FN1	novel	8103	45	NA	NA	0	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_22	3425637.0632140716	NA	1	NA	TRUE	NA	NA	NA	C	coding	1073	3222	931	4152	35.0	-1	True	AATAAA	-14
PB.12095.4	chrX	-	5558	21	novel_in_catalog	PHF8	novel	6062	22	NA	NA	83	0	intron_retention	FALSE	canonical	1	67014	junction_9	48789.89415388703	NA	1	NA	TRUE	NA	NA	NA	C	coding	923	2772	311	3082	15.0	-10	True	GATAAA	-17
PB.12095.7	chrX	-	5110	23	novel_in_catalog	PHF8	novel	6062	22	NA	NA	-157	-1	combination_of_known_junctions	FALSE	canonical	1	64495	junction_1	49665.73235563418	NA	0	NA	TRUE	NA	NA	NA	C	coding	1049	3150	663	3812	15.0	3	True	GATAAA	-16
PB.12095.9	chrX	-	3608	21	novel_in_catalog	PHF8	novel	6062	22	NA	NA	-161	146	combination_of_known_junctions	FALSE	canonical	1	16234	junction_1	57908.19345159629	NA	0	NA	TRUE	NA	NA	NA	C	coding	895	2688	667	3354	20.0	-1	True	AGTAAA	-14
PB.12095.8	chrX	-	4769	22	novel_in_catalog	PHF8	novel	6062	22	NA	NA	127	-221	intron_retention	FALSE	canonical	1	2247	junction_21	57235.146213191	NA	0	NA	TRUE	NA	NA	NA	C	coding	1024	3075	256	3330	15.0	-2	True	NA	NA
PB.7087.3	chr2	+	2064	1	novel_in_catalog	COPS8	novel	4007	8	NA	NA	3	-6234	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-25	True	NA	NA
PB.8874.17	chr4	-	2038	7	full-splice_match	PPM1K	ENST00000608933.5	6484	7	173	4273	-2	-22	multi-exon	FALSE	canonical	1	105597	junction_6	56982.30314877496	NA	0	NA	TRUE	NA	NA	NA	C	coding	372	1119	218	1336	100.0	-3	True	NA	NA
PB.7087.5	chr2	+	1933	9	novel_in_catalog	COPS8	novel	4007	8	NA	NA	-1	-323	combination_of_known_junctions	FALSE	canonical	1	13362	junction_8	136693.5158465257	NA	0	NA	TRUE	NA	NA	NA	C	coding	209	630	58	687	35.0	-6	True	AATAAA	-22
PB.10495.9	chr7	-	3864	28	novel_in_catalog	VPS41	novel	5903	29	NA	NA	-6	3	intron_retention	FALSE	canonical	1	194369	junction_27	61945.276418129884	NA	1	NA	TRUE	NA	NA	NA	C	coding	841	2526	24	2549	25.0	-7	True	NA	NA
PB.9071.9	chr4	+	5421	10	incomplete-splice_match	CEP44	ENST00000396791.7	3824	14	8	11964	8	-1	intron_retention	FALSE	canonical	1	29482	junction_1	35002.67417861557	NA	9	NA	TRUE	NA	NA	NA	C	coding	373	1122	297	1418	15.0	-10	True	AATAAA	-16
PB.8321.3	chr3	+	3273	4	full-splice_match	ADPRH	ENST00000478927.5	1501	4	165	-1937	79	-1	multi-exon	FALSE	canonical	1	16165	junction_1	30781.899302458038	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	134	1207	25.0	-5	True	AATAAA	-19
PB.8321.2	chr3	+	1766	3	intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2906	junction_2	23.0	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	30.0	-4	True	NA	NA
PB.8321.1	chr3	+	3699	5	novel_not_in_catalog	ADPRH	novel	4546	4	NA	NA	-18861	-1	any annotated donor/acceptor	FALSE	canonical	1	2442	junction_2	39321.91702075955	NA	0	NA	TRUE	NA	NA	NA	C	coding	402	1209	425	1633	25.0	-2674	False	AATAAA	-19
PB.11857.1	chr9	+	3514	7	novel_not_in_catalog	AIF1L	novel	3515	7	NA	NA	-16	-2	any annotated donor/acceptor	FALSE	canonical	1	69	junction_2	151297.75780192149	NA	0	NA	TRUE	NA	NA	NA	C	coding	20	63	362	424	20.0	-6311	False	AATAAA	-13
PB.8321.5	chr3	+	3324	4	full-splice_match	ADPRH	ENST00000478399.5	4546	4	1223	-1	815	1	multi-exon	FALSE	canonical	1	36339	junction_1	21276.582656891955	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	183	1256	30.0	0	True	AATAAA	-21
PB.8321.4	chr3	+	3358	5	full-splice_match	ADPRH	ENST00000357003.7	3439	5	80	1	80	-1	multi-exon	FALSE	canonical	1	18304	junction_1	27809.525409470763	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	219	1292	25.0	-4	True	AATAAA	-19
PB.3538.1	chr14	-	4380	12	full-splice_match	ZFYVE1	ENST00000556143.5	4485	12	105	0	-1	0	multi-exon	FALSE	canonical	1	102722	junction_11	39014.18030569936	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	617	2950	10.0	-2	True	CATAAA	-14
PB.3538.6	chr14	-	3000	12	full-splice_match	ZFYVE1	ENST00000556143.5	4485	12	58	1427	-23	-1	multi-exon	FALSE	canonical	1	102722	junction_11	39014.18030569936	NA	0	NA	TRUE	NA	NA	NA	C	coding	777	2334	664	2997	10.0	-19	True	AATAAA	-22
PB.3538.4	chr14	-	4004	12	full-splice_match	ZFYVE1	ENST00000556143.5	4485	12	109	372	3	-372	multi-exon	FALSE	canonical	1	102722	junction_11	39014.18030569936	NA	2	NA	TRUE	NA	NA	NA	C	coding	777	2334	613	2946	50.0	2	True	TATAAA	-17
PB.3538.5	chr14	-	3229	12	full-splice_match	ZFYVE1	ENST00000556143.5	4485	12	106	1150	0	276	multi-exon	FALSE	canonical	1	102722	junction_11	39014.18030569936	NA	1	NA	TRUE	NA	NA	NA	C	coding	777	2334	616	2949	45.0	-1	True	AATATA	-17
PB.5571.1	chr19	-	2241	3	full-splice_match	C19orf25	ENST00000585675.5	1837	3	342	-746	-1	-1	multi-exon	FALSE	canonical	1	110137	junction_2	35383.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	55	411	15.0	0	True	ATTAAA	-17
PB.5571.2	chr19	-	1275	3	full-splice_match	C19orf25	ENST00000585675.5	1837	3	342	220	-1	0	multi-exon	FALSE	canonical	1	110137	junction_2	35383.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	118	357	55	411	10.0	0	True	CATAAA	-20
PB.3708.1	chr14	+	1194	8	full-splice_match	CRIP2	ENST00000329146.8	1857	8	654	9	-10	0	multi-exon	FALSE	canonical	1	1013655	junction_2	215519.32961465666	NA	0	NA	TRUE	NA	NA	NA	A	coding	208	627	60	686	10.0	-18	True	AATAAA	-16
PB.9074.2	chr4	+	2321	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	-16	-9	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	393963.0081524914	NA	2	NA	TRUE	NA	NA	NA	C	coding	162	489	184	672	30.0	-40	True	NA	NA
PB.10495.2	chr7	-	4623	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	0	189	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	92888.5882446964	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	18	2582	30.0	-1	True	NA	NA
PB.244.1	chr1	-	5695	2	novel_in_catalog	PEF1	novel	1629	5	NA	NA	8	-5	intron_retention	FALSE	canonical	1	248034	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	87	264	122	385	20.0	-4	True	AATAAA	-16
PB.244.2	chr1	-	1613	5	full-splice_match	PEF1	ENST00000373703.4	1629	5	11	5	11	-5	multi-exon	TRUE	canonical	1	248034	junction_4	101634.50216461928	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	13	867	20.0	-1	True	AATAAA	-16
PB.7628.5	chr22	-	6693	55	full-splice_match	PI4KA	ENST00000255882.10	6752	55	48	11	48	1	multi-exon	FALSE	canonical	1	170	junction_6	180467.6902878346	NA	1	NA	TRUE	NA	NA	NA	C	coding	2102	6309	40	6348	15.0	46	True	AATAAA	-15
PB.7628.2	chr22	-	1949	11	novel_in_catalog	PI4KA	novel	6752	55	NA	NA	-898	0	intron_retention	FALSE	canonical	1	170	junction_5	319202.8105414487	NA	0	NA	TRUE	NA	NA	NA	C	coding	245	738	187	924	15.0	NA	False	AATAAA	-24
PB.2496.1	chr12	+	6341	15	full-splice_match	PDE3A	ENST00000544307.1	2969	15	217	-3589	217	-275	multi-exon	FALSE	canonical	1	4026	junction_1	37417.65595120374	NA	7	NA	TRUE	NA	NA	NA	A	coding	819	2460	47	2506	45.0	2	True	NA	NA
PB.6391.1	chr2	+	1966	18	full-splice_match	WDR43	ENST00000407426.7	3533	18	24	1543	24	10	multi-exon	FALSE	canonical	1	419891	junction_6	129950.9957138888	NA	0	NA	TRUE	NA	NA	NA	C	coding	644	1932	33	1964	55.0	-23	True	NA	NA
PB.780.52	chr1	-	6295	15	full-splice_match	ADAR	ENST00000529168.2	6343	15	-16	64	0	-64	multi-exon	FALSE	canonical	1	223198	junction_8	383959.7746140518	NA	2	NA	TRUE	NA	NA	NA	C	coding	1200	3603	181	3783	15.0	-1	True	NA	NA
PB.5745.1	chr19	-	2663	4	full-splice_match	ZNF443	ENST00000301547.9	2663	4	0	0	0	0	multi-exon	FALSE	canonical	1	8083	junction_1	11726.998602465263	NA	0	NA	TRUE	NA	NA	NA	A	coding	671	2016	199	2214	20.0	-69	False	ATTAAA	-21
PB.7901.32	chr3	+	3583	1	novel_in_catalog	CHL1	novel	8023	28	NA	NA	15082	1257	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	AATAAA	-18
PB.10495.7	chr7	-	4217	29	full-splice_match	VPS41	ENST00000310301.8	5903	29	38	1648	0	944	multi-exon	FALSE	canonical	1	194369	junction_28	68542.99035061194	NA	1	NA	TRUE	NA	NA	NA	C	coding	854	2565	18	2582	85.0	-1	True	NA	NA
PB.7901.30	chr3	+	3557	17	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	-1765	-25	any annotated donor/acceptor	FALSE	canonical	1	2963	junction_1	28145.197065771164	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	81	2441	70.0	-32	False	TATAAA	-44
PB.7901.31	chr3	+	6140	17	novel_not_in_catalog	CHL1	novel	8023	28	NA	NA	-1763	0	any annotated donor/acceptor	FALSE	canonical	1	2963	junction_1	28145.197065771164	NA	6	1	TRUE	NA	NA	NA	C	coding	786	2361	79	2439	30.0	-30	False	AATAAA	-21
PB.147.4	chr1	-	2797	19	full-splice_match	ECE1	ENST00000415912.6	5099	19	-19	2321	-19	246	multi-exon	FALSE	canonical	1	258619	junction_18	181641.51616856604	NA	0	NA	TRUE	NA	NA	NA	C	coding	754	2265	146	2410	55.0	-1	True	AATACA	-17
PB.147.5	chr1	-	2725	18	novel_in_catalog	ECE1	novel	5099	19	NA	NA	11	278	no_combination_of_known_junctions	FALSE	canonical	1	8170	junction_16	249119.04300792297	NA	0	NA	TRUE	NA	NA	NA	C	coding	656	1971	336	2306	40.0	329	False	TTTAAA	-18
PB.147.6	chr1	-	2772	19	full-splice_match	ECE1	ENST00000374893.10	2484	19	31	-319	5	274	multi-exon	FALSE	canonical	1	122202	junction_18	202534.77997477888	NA	0	NA	TRUE	NA	NA	NA	C	coding	770	2313	45	2357	45.0	-1	True	AATACA	-45
PB.10495.6	chr7	-	4843	29	full-splice_match	VPS41	ENST00000310301.8	5903	29	38	1022	0	-1022	multi-exon	FALSE	canonical	1	194369	junction_28	68542.99035061194	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	18	2582	20.0	-1	True	AATAAA	-21
PB.11858.2	chr9	+	6339	36	novel_in_catalog	NUP214	novel	7600	36	NA	NA	4	0	intron_retention	FALSE	canonical	1	12486	junction_11	79480.25305047892	NA	0	NA	TRUE	NA	NA	NA	C	coding	1994	5985	141	6125	25.0	-511	False	ATTAAA	-15
PB.10495.5	chr7	-	4594	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	1	-30	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	92888.5882446964	NA	1	1	TRUE	NA	NA	NA	C	coding	854	2565	17	2581	65.0	0	True	NA	NA
PB.10495.4	chr7	-	4418	30	novel_not_in_catalog	VPS41	novel	5903	29	NA	NA	0	-9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	92888.5882446964	NA	0	NA	TRUE	NA	NA	NA	C	coding	854	2565	18	2582	25.0	-1	True	NA	NA
PB.12387.1	chrY	+	5589	6	novel_in_catalog	NLGN4Y	novel	7368	7	NA	NA	-20	239	combination_of_known_junctions	FALSE	canonical	1	9174	junction_1	10181.248772130068	NA	1	NA	TRUE	NA	NA	NA	B	coding	797	2394	493	2886	30.0	0	True	AATAAA	-31
PB.8473.58	chr3	+	3914	9	novel_not_in_catalog	MBNL1	novel	6422	10	NA	NA	53614	-3	any annotated donor/acceptor	FALSE	canonical	1	106	junction_1	358345.3149228932	NA	1	NA	TRUE	NA	NA	NA	C	coding	333	1002	79	1080	75.0	-9	True	TTTAAA	-6
PB.9496.1	chr5	+	3750	24	novel_in_catalog	ANKHD1	novel	2064	10	NA	NA	-2	-14	combination_of_known_junctions	FALSE	canonical	1	76261	junction_14	137142.14748650332	NA	1	NA	TRUE	NA	NA	NA	C	coding	1198	3594	157	3750	80.0	-21	True	NA	NA
PB.11720.5	chr9	+	3724	10	novel_in_catalog	UGCG	novel	4007	9	NA	NA	-54	-4	combination_of_known_junctions	FALSE	canonical	1	13179	junction_3	184115.8094859501	NA	3	NA	TRUE	NA	NA	NA	C	coding	266	801	556	1356	45.0	-44	True	AATAAA	-16
PB.11720.4	chr9	+	3760	10	novel_not_in_catalog	UGCG	novel	4007	9	NA	NA	50	-29	any annotated donor/acceptor	TRUE	canonical	0	0	junction_1	152133.21888819663	NA	2	1	TRUE	NA	NA	NA	C	coding	394	1185	233	1417	70.0	2	True	AATATA	-45
PB.11720.3	chr9	+	1835	9	full-splice_match	UGCG	ENST00000374279.3	4007	9	379	1793	-32	-1793	multi-exon	FALSE	canonical	1	297635	junction_1	83095.13281239386	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	72	1256	70.0	-22	True	TATAAA	-28
PB.11720.2	chr9	+	1434	9	full-splice_match	UGCG	ENST00000374279.3	4007	9	355	2218	-56	1843	multi-exon	FALSE	canonical	1	297635	junction_1	83095.13281239386	NA	0	NA	TRUE	NA	NA	NA	C	coding	394	1185	96	1280	80.0	-46	True	NA	NA
PB.11720.1	chr9	+	3612	9	full-splice_match	UGCG	ENST00000374279.3	4007	9	366	29	-45	-29	multi-exon	FALSE	canonical	1	297635	junction_1	83095.13281239386	NA	2	NA	TRUE	NA	NA	NA	C	coding	394	1185	85	1269	70.0	-35	True	AATATA	-45
PB.7173.1	chr20	-	2782	6	full-splice_match	MKKS	ENST00000347364.7	6714	6	17	3915	17	260	multi-exon	FALSE	canonical	1	232179	junction_3	226613.65912707028	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	747	2459	25.0	-8	True	AATAAA	-16
PB.9633.1	chr5	+	5292	4	full-splice_match	ARL10	ENST00000310389.5	10845	4	5	5548	5	-5548	multi-exon	FALSE	canonical	1	38447	junction_3	4623.396226440761	NA	6	NA	TRUE	NA	NA	NA	C	coding	244	735	92	826	95.0	-14	True	NA	NA
PB.9633.2	chr5	+	2795	4	full-splice_match	ARL10	ENST00000310389.5	10845	4	24	8026	24	4756	multi-exon	FALSE	canonical	1	38447	junction_3	4623.396226440761	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	73	807	50.0	5	True	NA	NA
PB.7173.2	chr20	-	2525	6	full-splice_match	MKKS	ENST00000347364.7	6714	6	7	4182	7	-7	multi-exon	FALSE	canonical	1	232179	junction_3	226613.65912707028	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	757	2469	40.0	-18	True	AATAAA	-19
PB.11720.9	chr9	+	3461	9	novel_not_in_catalog	UGCG	novel	4007	9	NA	NA	-40	-29	any annotated donor/acceptor	FALSE	canonical	1	5048	junction_8	154089.02628670342	NA	1	NA	TRUE	NA	NA	NA	C	coding	298	897	80	976	70.0	-30	True	AATATA	-45
PB.11720.8	chr9	+	1600	6	novel_not_in_catalog	UGCG	novel	4007	9	NA	NA	-41	-1232	any annotated donor/acceptor	FALSE	canonical	1	6904	junction_5	152638.32474368945	NA	2	NA	TRUE	NA	NA	NA	C	coding	239	720	81	800	20.0	-31	True	AATAAA	-20
PB.2891.3	chr12	+	3765	14	novel_in_catalog	ANKRD13A	novel	1455	12	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	18727	junction_12	176961.86839131298	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	280	1680	30.0	-138	False	AATAAA	-28
PB.2891.2	chr12	+	3620	14	novel_in_catalog	ANKRD13A	novel	1455	12	NA	NA	16	0	no_combination_of_known_junctions	FALSE	canonical	1	17565	junction_3	225761.4783119512	NA	2	1	TRUE	NA	NA	NA	C	coding	423	1272	475	1746	30.0	-346	False	AATAAA	-28
PB.2891.1	chr12	+	3711	15	novel_in_catalog	ANKRD13A	novel	1455	12	NA	NA	-18	8	combination_of_known_junctions	TRUE	canonical	1	22185	junction_1	160923.64558413016	NA	4	1	TRUE	NA	NA	NA	C	coding	502	1509	321	1829	10.0	-380	False	AATAAA	-36
PB.2891.7	chr12	+	3712	13	novel_in_catalog	ANKRD13A	novel	1455	12	NA	NA	4	0	no_combination_of_known_junctions	FALSE	canonical	1	5378	junction_3	187147.81006932206	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	627	1838	30.0	4	True	AATAAA	-28
PB.2891.6	chr12	+	3788	14	novel_in_catalog	ANKRD13A	novel	1455	12	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	7769	junction_11	181284.02470777318	NA	1	NA	TRUE	NA	NA	NA	C	coding	552	1659	258	1916	35.0	2	True	AATAAA	-26
PB.2891.5	chr12	+	3858	14	novel_in_catalog	ANKRD13A	novel	1455	12	NA	NA	2	0	no_combination_of_known_junctions	FALSE	canonical	1	17565	junction_3	177454.36060556246	NA	1	NA	TRUE	NA	NA	NA	C	coding	424	1275	710	1984	30.0	2	True	AATAAA	-28
PB.2891.4	chr12	+	3787	15	full-splice_match	ANKRD13A	ENST00000261739.8	4148	15	26	335	26	0	multi-exon	FALSE	canonical	1	233597	junction_1	123784.95628836012	NA	1	NA	TRUE	NA	NA	NA	C	coding	590	1773	141	1913	30.0	1	True	AATAAA	-28
PB.227.9	chr1	+	2305	10	full-splice_match	RCC1	ENST00000373832.5	2424	10	118	1	-3	-1	multi-exon	FALSE	canonical	1	302034	junction_1	232431.94236306392	NA	0	NA	TRUE	NA	NA	NA	C	coding	421	1266	65	1330	30.0	-1	True	AATAAA	-13
PB.2891.9	chr12	+	3625	15	novel_not_in_catalog	ANKRD13A	novel	1455	12	NA	NA	-6975	0	any annotated donor/acceptor	FALSE	canonical	1	2566	junction_1	164858.3914554722	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	45	1751	30.0	-13	False	AATAAA	-28
PB.2891.8	chr12	+	3700	15	novel_not_in_catalog	ANKRD13A	novel	1455	12	NA	NA	-6987	1	any annotated donor/acceptor	FALSE	canonical	1	271	junction_1	165322.64232509726	NA	4	1	TRUE	NA	NA	NA	C	coding	502	1509	317	1825	25.0	-25	False	AATAAA	-29
PB.8247.4	chr3	+	3499	9	full-splice_match	ARL13B	ENST00000535334.5	3906	9	16	391	0	-2	multi-exon	FALSE	canonical	1	2843	junction_1	41274.30901583181	NA	7	1	TRUE	NA	NA	NA	C	coding	325	978	508	1485	15.0	0	True	AATAAA	-14
PB.227.8	chr1	+	2458	11	novel_in_catalog	RCC1	novel	2715	12	NA	NA	-4	100	combination_of_known_junctions	FALSE	canonical	1	90330	junction_3	319151.8056373957	NA	0	NA	TRUE	NA	NA	NA	C	coding	438	1317	66	1382	30.0	-2	True	AATAAA	-13
PB.4996.7	chr17	+	2027	8	full-splice_match	MLX	ENST00000246912.8	2586	8	31	528	0	6	multi-exon	FALSE	canonical	1	67764	junction_1	232656.2467384191	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	23	919	30.0	1	True	AATAAA	-21
PB.4996.6	chr17	+	1980	6	full-splice_match	MLX	ENST00000590050.5	2537	6	30	527	0	7	multi-exon	FALSE	canonical	1	117389	junction_2	250648.50080812373	NA	6	NA	TRUE	NA	NA	NA	C	coding	162	489	24	512	35.0	0	True	AATAAA	-22
PB.4996.5	chr17	+	1867	8	full-splice_match	MLX	ENST00000435881.6	2428	8	34	527	0	7	multi-exon	FALSE	canonical	1	441051	junction_5	119514.56183961134	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	24	758	35.0	0	True	AATAAA	-22
PB.4996.4	chr17	+	2062	7	novel_in_catalog	MLX	novel	2428	8	NA	NA	0	-1	intron_retention	FALSE	canonical	1	535746	junction_2	94058.14795542997	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	24	602	15.0	0	True	AATAAA	-14
PB.4996.3	chr17	+	2386	8	full-splice_match	MLX	ENST00000435881.6	2428	8	33	9	-1	-9	multi-exon	FALSE	canonical	1	441051	junction_5	119514.56183961134	NA	0	NA	TRUE	NA	NA	NA	C	coding	244	735	25	759	20.0	-1	True	NA	NA
PB.4996.2	chr17	+	2296	7	full-splice_match	MLX	ENST00000346833.8	2334	7	26	12	-1	-12	multi-exon	FALSE	canonical	1	117389	junction_2	237499.11223184955	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	28	672	20.0	-4	True	NA	NA
PB.4996.1	chr17	+	2393	6	novel_in_catalog	MLX	novel	2428	8	NA	NA	-12	7	intron_retention	FALSE	canonical	1	535746	junction_2	89905.46253126113	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-3	True	AATAAA	-22
PB.9965.5	chr6	+	2515	15	novel_not_in_catalog	FGD2	novel	1438	2	NA	NA	0	-1651	any annotated donor/acceptor	FALSE	canonical	1	28539	junction_14	38894.495666127994	NA	0	NA	TRUE	NA	NA	NA	C	coding	778	2337	164	2500	90.0	0	True	NA	NA
PB.8021.1	chr3	+	3244	19	full-splice_match	XYLB	ENST00000207870.7	3664	19	36	384	0	-384	multi-exon	FALSE	canonical	1	45785	junction_2	11620.457190305739	NA	1	NA	TRUE	NA	NA	NA	C	coding	536	1611	55	1665	65.0	7	True	NA	NA
PB.8021.2	chr3	+	3493	16	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	5	-18873	any annotated donor/acceptor	FALSE	canonical	0	0	junction_15	17285.09476848639	NA	1	NA	TRUE	NA	NA	NA	C	coding	466	1401	105	1505	20.0	-43	True	NA	NA
PB.8021.3	chr3	+	3384	20	novel_not_in_catalog	XYLB	novel	1666	3	NA	NA	9	5229	any annotated donor/acceptor	FALSE	canonical	1	389	junction_19	21707.134253033597	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1689	101	1789	30.0	-39	True	NA	NA
PB.8021.4	chr3	+	6561	19	full-splice_match	XYLB	ENST00000207870.7	3664	19	6	-2903	6	-2772	multi-exon	FALSE	canonical	1	45785	junction_2	11620.457190305739	NA	2	NA	TRUE	NA	NA	NA	C	coding	536	1611	85	1695	90.0	-23	True	NA	NA
PB.8021.5	chr3	+	1914	18	novel_in_catalog	XYLB	novel	1666	3	NA	NA	7	32	no_combination_of_known_junctions	FALSE	canonical	1	3464	junction_16	15935.89470346739	NA	6	1	TRUE	NA	NA	NA	C	coding	463	1392	84	1475	50.0	-22	True	AATAAA	-22
PB.4996.9	chr17	+	1891	7	novel_in_catalog	MLX	novel	2428	8	NA	NA	33	7	combination_of_known_junctions	FALSE	canonical	1	67764	junction_1	300050.4438238955	NA	0	NA	TRUE	NA	NA	NA	C	coding	88	267	516	782	35.0	1	True	AATAAA	-22
PB.4996.8	chr17	+	1776	7	full-splice_match	MLX	ENST00000346833.8	2334	7	31	527	0	7	multi-exon	FALSE	canonical	1	117389	junction_2	237499.11223184955	NA	0	NA	TRUE	NA	NA	NA	C	coding	214	645	23	667	35.0	1	True	AATAAA	-22
PB.5778.2	chr19	-	2479	10	full-splice_match	PRKACA	ENST00000589994.5	1127	10	1	-1353	1	0	multi-exon	FALSE	canonical	1	5956	junction_9	331685.053281789	NA	0	NA	TRUE	NA	NA	NA	A	coding	343	1032	33	1064	45.0	-2	True	AATAAA	-10
PB.10093.14	chr6	+	6611	1	novel_in_catalog	ZNF292	novel	10610	8	NA	NA	13105	4972	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	-629	False	NA	NA
PB.9726.14	chr6	-	2953	4	incomplete-splice_match	SLC35B3	ENST00000644923.1	1973	11	173	12448	45	-12448	3prime_fragment	FALSE	canonical	1	152871	junction_3	20933.819866957445	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	140	598	50.0	544	False	AATAAA	-20
PB.10093.11	chr6	+	6278	4	incomplete-splice_match	ZNF292	ENST00000369578.6	1732	5	4	-512	4	512	intron_retention	FALSE	canonical	1	85620	junction_1	40390.84359384218	NA	0	NA	TRUE	NA	NA	NA	C	coding	190	573	24	596	90.0	0	True	NA	NA
PB.10093.10	chr6	+	6278	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	20	4312	4	-761	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	0	NA	TRUE	NA	NA	NA	C	coding	2085	6255	24	6278	70.0	0	True	NA	NA
PB.10093.13	chr6	+	7140	9	novel_not_in_catalog	ZNF292	novel	1096	4	NA	NA	0	-12	any annotated donor/acceptor	FALSE	canonical	1	6762	junction_5	56388.32628024616	NA	4	NA	TRUE	NA	NA	NA	C	coding	2141	6423	716	7138	70.0	12	True	AATAAA	-19
PB.10093.12	chr6	+	8307	8	full-splice_match	ZNF292	ENST00000369577.7	10610	8	28	2275	1	1	multi-exon	FALSE	canonical	1	76576	junction_6	38995.24959713499	NA	1	NA	TRUE	NA	NA	NA	C	coding	2723	8172	16	8187	90.0	8	True	NA	NA
PB.488.3	chr1	+	2911	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	75	2	-6	-2	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	2	NA	TRUE	NA	NA	NA	C	coding	337	1014	183	1196	25.0	-5061	False	NA	NA
PB.227.6	chr1	+	2142	9	novel_in_catalog	RCC1	novel	2715	12	NA	NA	-21	-2	no_combination_of_known_junctions	FALSE	canonical	1	8265	junction_3	329620.1798938439	NA	0	NA	TRUE	NA	NA	NA	C	coding	386	1161	8	1168	35.0	-19	True	AATAAA	-12
PB.9726.11	chr6	-	2373	5	novel_not_in_catalog	SLC35B3	novel	2442	12	NA	NA	-10	-11924	any annotated donor/acceptor	FALSE	canonical	1	4566	junction_1	78439.54196186704	NA	0	NA	TRUE	NA	NA	NA	C	coding	151	456	249	704	30.0	-14	True	AATAAA	-12
PB.8984.5	chr4	-	2860	6	novel_not_in_catalog	SCLT1	novel	3055	21	NA	NA	39	2439	any annotated donor/acceptor	FALSE	canonical	1	6559	junction_1	80806.2108068433	NA	1	NA	TRUE	NA	NA	NA	C	coding	103	312	404	715	35.0	0	True	AATAAA	-19
PB.488.1	chr1	+	2605	3	full-splice_match	DNAJB4	ENST00000487931.1	949	3	32	-1688	-25	-2	multi-exon	FALSE	canonical	1	41373	junction_1	176022.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	222	669	222	890	25.0	8	True	NA	NA
PB.6694.1	chr2	-	1500	9	full-splice_match	ZC3H8	ENST00000272570.9	1601	9	13	88	13	-48	multi-exon	FALSE	non_canonical	0	0	junction_3	59808.49302761586	NA	1	NA	TRUE	NA	NA	NA	A	coding	291	876	94	969	25.0	-33	True	NA	NA
PB.1107.22	chr1	-	3453	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	9	1868	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	14	NA	TRUE	NA	NA	NA	C	coding	370	1113	367	1479	45.0	-1	True	NA	NA
PB.9720.11	chr6	+	1604	15	incomplete-splice_match	RIOK1	ENST00000379834.6	2810	17	319	5122	22	1348	3prime_fragment	FALSE	canonical	1	207744	junction_1	118726.43239304639	NA	1	NA	TRUE	NA	NA	NA	C	coding	472	1416	189	1604	40.0	5	True	NA	NA
PB.9720.10	chr6	+	1782	16	incomplete-splice_match	RIOK1	ENST00000379834.6	2810	17	315	3653	18	2817	3prime_fragment	FALSE	canonical	1	207744	junction_1	115093.03097187653	NA	1	NA	TRUE	NA	NA	NA	C	coding	530	1590	193	1782	65.0	1	True	AAGAAA	-25
PB.9720.13	chr6	+	1756	16	novel_not_in_catalog	RIOK1	novel	2810	17	NA	NA	28	2817	any annotated donor/acceptor	FALSE	canonical	1	8634	junction_15	147794.8068153351	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1572	183	1754	65.0	11	True	AAGAAA	-25
PB.9720.12	chr6	+	2452	16	novel_in_catalog	RIOK1	novel	2810	17	NA	NA	24	-138	intron_retention	FALSE	canonical	1	207744	junction_1	114664.83434768577	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	1011	1994	15.0	7	True	TATAAA	-16
PB.6890.5	chr2	+	3001	24	incomplete-splice_match	ITGAV	ENST00000261023.7	7030	30	-52	12883	-52	-2	3prime_fragment	FALSE	canonical	1	390989	junction_13	119547.54206242904	NA	0	NA	TRUE	NA	NA	NA	C	coding	815	2448	327	2774	45.0	0	True	AATAAA	-45
PB.1107.26	chr1	-	1617	9	novel_in_catalog	LPGAT1	novel	7782	8	NA	NA	-37	-14	no_combination_of_known_junctions	FALSE	canonical	1	37604	junction_8	92091.22705875679	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	413	1525	75.0	24	False	AATATA	-4
PB.855.1	chr1	-	5134	7	full-splice_match	CD84	ENST00000368054.7	8181	7	-23	3070	8	-3070	multi-exon	FALSE	canonical	1	36641	junction_3	13776.22755268413	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	60	1046	100.0	-15	True	NA	NA
PB.354.11	chr1	+	4428	22	novel_not_in_catalog	AL451062.3	novel	4037	26	NA	NA	357	-225548	any annotated donor/acceptor	FALSE	canonical	1	21	junction_19	113929.46260796893	NA	0	NA	TRUE	NA	NA	NA	B	coding	1082	3249	84	3332	30.0	0	True	TATAAA	-13
PB.10963.1	chr8	-	1983	2	full-splice_match	AC100810.1	ENST00000518481.1	579	2	-38	-1366	-38	731	multi-exon	FALSE	canonical	1	317034	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	-2	True	NA	NA
PB.488.8	chr1	+	3374	3	full-splice_match	DNAJB4	ENST00000370763.5	2988	3	67	-453	-14	453	multi-exon	FALSE	canonical	1	232049	junction_1	80684.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	337	1014	191	1204	45.0	11	True	AATAAA	-16
PB.9483.30	chr5	+	4914	15	novel_in_catalog	MATR3	novel	3249	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	147046	junction_9	873881.4014702085	NA	2	NA	TRUE	NA	NA	NA	C	coding	895	2688	262	2949	20.0	9	True	CATAAA	-14
PB.8362.17	chr3	-	3193	10	full-splice_match	ZNF148	ENST00000485866.5	2960	10	19	-252	-16	0	multi-exon	FALSE	canonical	1	3795	junction_6	85677.45673551864	NA	0	NA	TRUE	NA	NA	NA	C	coding	794	2385	544	2928	80.0	16	False	NA	NA
PB.10769.9	chr7	-	2096	8	novel_in_catalog	SRPK2	novel	3650	16	NA	NA	-7	15018	intron_retention	FALSE	canonical	1	83699	junction_6	132968.2354965321	NA	1	NA	TRUE	NA	NA	NA	C	coding	284	855	100	954	35.0	2	True	NA	NA
PB.3961.5	chr15	-	2797	23	novel_not_in_catalog	PARP6	novel	516	3	NA	NA	-43	0	any annotated donor/acceptor	FALSE	canonical	1	2577	junction_9	166429.6770235812	NA	0	NA	TRUE	NA	NA	NA	B	coding	362	1089	1170	2258	25.0	343	False	AATAAA	-30
PB.3961.6	chr15	-	2653	23	novel_in_catalog	PARP6	novel	516	3	NA	NA	16	-5	combination_of_known_junctions	FALSE	canonical	1	57345	junction_22	117550.83650862762	NA	0	NA	TRUE	NA	NA	NA	B	coding	498	1497	623	2119	25.0	-2	True	AATAAA	-25
PB.3961.7	chr15	-	2730	24	novel_in_catalog	PARP6	novel	516	3	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	57345	junction_23	149785.7343133586	NA	1	NA	TRUE	NA	NA	NA	B	coding	611	1836	622	2457	25.0	-1	True	AATAAA	-30
PB.7650.3	chr22	-	3789	2	novel_not_in_catalog	ZNF70	novel	6924	2	NA	NA	-41	-2906	any annotated donor/acceptor	FALSE	canonical	1	1991	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	446	1341	233	1573	25.0	-22	True	NA	NA
PB.3961.1	chr15	-	3921	22	novel_in_catalog	PARP6	novel	516	3	NA	NA	-27	4	combination_of_known_junctions	TRUE	canonical	1	140825	junction_13	106665.78823413802	NA	0	NA	TRUE	NA	NA	NA	B	coding	518	1557	1821	3377	20.0	-7	True	AATAAA	-35
PB.3961.2	chr15	-	4568	21	novel_in_catalog	PARP6	novel	516	3	NA	NA	-27	0	intron_retention	FALSE	canonical	1	140825	junction_13	108998.44062291672	NA	0	NA	TRUE	NA	NA	NA	B	coding	383	1152	2878	4029	25.0	-7	True	AATAAA	-30
PB.3961.3	chr15	-	4488	21	novel_in_catalog	PARP6	novel	516	3	NA	NA	-43	0	intron_retention	FALSE	canonical	1	294595	junction_13	93657.67307608864	NA	0	NA	TRUE	NA	NA	NA	B	coding	363	1092	2894	3985	70.0	343	False	NA	NA
PB.10769.1	chr7	-	4307	16	novel_in_catalog	SRPK2	novel	715	3	NA	NA	-10	-464	intron_retention	FALSE	canonical	1	28140	junction_2	167656.84227869206	NA	0	NA	TRUE	NA	NA	NA	C	coding	699	2100	103	2202	20.0	-1	True	AATAAA	-17
PB.7755.6	chr22	-	2041	7	novel_in_catalog	MFNG	novel	2034	7	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	15217	junction_6	139756.0661354872	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	549	1148	15.0	112	False	ATTAAA	-14
PB.7755.5	chr22	-	2969	8	novel_not_in_catalog	MFNG	novel	2034	7	NA	NA	61	-2	intron_retention	FALSE	canonical	1	1559	junction_7	143404.24550499592	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	1477	2076	15.0	1952	False	ATTAAA	-14
PB.7755.4	chr22	-	2095	8	full-splice_match	MFNG	ENST00000356998.7	2088	8	-7	0	-7	0	multi-exon	FALSE	canonical	1	271633	junction_7	69485.68287681385	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	232	1197	5.0	112	False	ATTAAA	-19
PB.7755.3	chr22	-	1457	9	novel_in_catalog	MFNG	novel	2034	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	30724	junction_1	126770.31577812045	NA	0	NA	TRUE	NA	NA	NA	C	coding	321	966	221	1186	5.0	-17	True	ATTAAA	-21
PB.3961.9	chr15	-	2796	23	novel_in_catalog	PARP6	novel	516	3	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	1	57345	junction_22	137683.0098079004	NA	3	NA	TRUE	NA	NA	NA	B	coding	519	1560	700	2259	20.0	375	False	AATAAA	-28
PB.7755.1	chr22	-	2279	8	novel_not_in_catalog	MFNG	novel	2034	7	NA	NA	0	4508	any annotated donor/acceptor	TRUE	canonical	1	4920	junction_1	143289.60513361375	NA	0	NA	TRUE	NA	NA	NA	C	coding	301	906	217	1122	45.0	-13	True	NA	NA
PB.7869.1	chr22	+	4419	19	novel_in_catalog	GRAMD4	novel	375	3	NA	NA	60	-3	combination_of_known_junctions	TRUE	canonical	1	68847	junction_1	53852.48106622066	NA	1	NA	TRUE	NA	NA	NA	B	coding	604	1815	74	1888	15.0	92	True	AATAAA	-18
PB.7869.2	chr22	+	3866	15	incomplete-splice_match	GRAMD4	ENST00000361034.7	4315	18	34618	8	-1728	-3	5prime_fragment	FALSE	canonical	1	135361	junction_9	45869.06549681409	NA	2	NA	TRUE	NA	NA	NA	B	coding	439	1320	16	1335	15.0	NA	False	AATAAA	-18
PB.2698.1	chr12	+	2281	2	full-splice_match	INHBE	ENST00000266646.2	2429	2	135	13	135	-13	multi-exon	FALSE	canonical	1	86605	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	A	coding	350	1053	82	1134	35.0	-4682	False	NA	NA
PB.9667.24	chr5	+	4763	15	full-splice_match	CANX	ENST00000247461.8	4260	15	48	-551	-2	551	multi-exon	FALSE	canonical	1	2163393	junction_1	1067369.0662731023	NA	2	NA	TRUE	NA	NA	NA	C	coding	592	1779	153	1931	70.0	-28	True	AAGAAA	-36
PB.8144.1	chr3	+	847	4	full-splice_match	MANF	ENST00000528157.5	1153	4	245	61	-65	-8	multi-exon	FALSE	canonical	1	1326098	junction_1	458024.1888505696	NA	0	NA	TRUE	NA	NA	NA	A	coding	179	540	61	600	25.0	1	True	ATTAAA	-14
PB.8362.19	chr3	-	3127	1	novel_in_catalog	ZNF148	novel	9651	9	NA	NA	-1921	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	519	1560	1303	2862	80.0	NA	False	NA	NA
PB.10951.5	chr7	+	3322	6	incomplete-splice_match	NOM1	ENST00000275820.3	6077	11	10	8601	10	346	intron_retention	FALSE	canonical	1	146282	junction_4	26650.68307567369	NA	0	NA	TRUE	NA	NA	NA	C	coding	672	2019	6	2024	75.0	-1	True	NA	NA
PB.12158.24	chrX	+	1914	11	novel_not_in_catalog	PGK1	novel	2405	11	NA	NA	884	5	any annotated donor/acceptor	FALSE	canonical	1	10211	junction_1	2290128.427362756	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	276	1472	5.0	-155	False	AATAAA	-20
PB.7416.2	chr20	-	3483	12	incomplete-splice_match	HELZ2	ENST00000427522.6	7827	14	4855	25	-1614	-25	5prime_fragment	FALSE	canonical	1	123105	junction_9	38824.82959938765	NA	1	NA	TRUE	NA	NA	NA	B	coding	577	1734	615	2348	40.0	4293	False	NA	NA
PB.7416.1	chr20	-	6450	12	incomplete-splice_match	HELZ2	ENST00000427522.6	7827	14	1908	5	1908	-5	5prime_fragment	FALSE	canonical	1	123105	junction_9	38824.82959938765	NA	1	NA	TRUE	NA	NA	NA	B	coding	1702	5109	187	5295	10.0	8072	False	GATAAA	-18
PB.12158.20	chrX	+	2423	8	novel_in_catalog	PGK1	novel	2405	11	NA	NA	75	4	intron_retention	FALSE	canonical	1	1623993	junction_6	1715379.706788677	NA	0	NA	TRUE	NA	NA	NA	C	coding	113	342	1261	1602	5.0	1	True	AATAAA	-19
PB.12158.21	chrX	+	1667	10	novel_in_catalog	PGK1	novel	2405	11	NA	NA	75	4	no_combination_of_known_junctions	FALSE	canonical	1	10586	junction_5	2391315.312295064	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	93	1226	5.0	1	True	AATAAA	-19
PB.12158.22	chrX	+	2244	11	novel_not_in_catalog	PGK1	novel	2405	11	NA	NA	840	-117	any annotated donor/acceptor	FALSE	canonical	1	7510	junction_1	2290515.2002924494	NA	43	3	TRUE	NA	NA	NA	C	coding	389	1170	73	1242	25.0	28	True	NA	NA
PB.12158.23	chrX	+	2474	11	novel_not_in_catalog	PGK1	novel	2405	11	NA	NA	882	-119	any annotated donor/acceptor	FALSE	canonical	1	10211	junction_1	2290128.427362756	NA	0	NA	TRUE	NA	NA	NA	C	coding	398	1197	278	1474	20.0	-157	False	NA	NA
PB.11088.6	chr8	-	4253	5	full-splice_match	RAB11FIP1	ENST00000287263.8	6253	5	-46	2046	-46	-1715	multi-exon	FALSE	canonical	1	227101	junction_2	52079.762563662865	NA	1	NA	TRUE	NA	NA	NA	C	coding	649	1950	73	2022	35.0	-17	False	TATAAA	-26
PB.8827.13	chr4	-	4315	12	novel_in_catalog	G3BP2	novel	4217	12	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	84195	junction_11	544277.957199921	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	221	1669	30.0	-99	True	AATAAA	-21
PB.6136.3	chr19	-	2828	7	novel_in_catalog	PIH1D1	novel	424	3	NA	NA	-34	0	intron_retention	FALSE	canonical	1	84596	junction_6	393387.72748541465	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	2365	2745	10.0	6	True	AATAAA	-15
PB.6136.2	chr19	-	2909	7	novel_in_catalog	PIH1D1	novel	424	3	NA	NA	-15	0	intron_retention	FALSE	canonical	1	22132	junction_2	495643.0566380967	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	614	949	10.0	-19	True	AATAAA	-15
PB.6136.1	chr19	-	2701	7	novel_in_catalog	PIH1D1	novel	424	3	NA	NA	3	0	intron_retention	FALSE	canonical	1	690885	junction_1	218239.58588345823	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	2237	2617	10.0	-1	True	AATAAA	-16
PB.6136.6	chr19	-	2612	8	novel_in_catalog	PIH1D1	novel	424	3	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	690885	junction_1	212322.55700260028	NA	1	NA	TRUE	NA	NA	NA	C	coding	159	480	2051	2530	5.0	-6	True	AATAAA	-14
PB.6136.5	chr19	-	3851	3	full-splice_match	PIH1D1	ENST00000599791.1	966	3	-74	-2811	-5	-1	multi-exon	FALSE	canonical	1	84596	junction_2	529752.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	143	432	3394	3825	5.0	-9	True	AATAAA	-14
PB.6136.4	chr19	-	2658	7	novel_in_catalog	PIH1D1	novel	424	3	NA	NA	-2	0	intron_retention	FALSE	canonical	1	19105	junction_4	373108.1189826959	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	246	845	10.0	-6	True	AATAAA	-15
PB.4431.2	chr16	-	1774	10	novel_in_catalog	AKTIP	novel	2426	10	NA	NA	-16	-63	combination_of_known_junctions	FALSE	canonical	1	509	junction_7	38240.139414875775	NA	1	1	TRUE	NA	NA	NA	B	coding	287	864	210	1073	15.0	-62	False	AATAAA	-8
PB.4431.1	chr16	-	2118	10	novel_in_catalog	AKTIP	novel	2426	10	NA	NA	-22	6	combination_of_known_junctions	FALSE	canonical	1	509	junction_7	38240.139414875775	NA	1	1	TRUE	NA	NA	NA	B	coding	287	864	216	1079	40.0	-68	False	AATAAA	-26
PB.935.2	chr1	-	3212	3	antisense	novelGene_DNM3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	18.0	NA	2	NA	FALSE	NA	NA	NA	B	coding	58	177	128	304	40.0	NA	False	NA	NA
PB.6890.9	chr2	+	2204	1	novel_in_catalog	ITGAV	novel	7030	30	NA	NA	6	-75746	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	15	True	NA	NA
PB.8164.8	chr3	-	3659	8	novel_in_catalog	WDR82	novel	4293	9	NA	NA	-3	0	no_combination_of_known_junctions	FALSE	canonical	1	14538	junction_7	170740.60173567745	NA	1	NA	TRUE	NA	NA	NA	C	coding	233	702	428	1129	95.0	-2	True	NA	NA
PB.275.5	chr1	-	5708	16	novel_not_in_catalog	AC114490.2	novel	3099	17	NA	NA	-230	-5451	any annotated donor/acceptor	FALSE	canonical	1	6722	junction_1	58595.49922609718	NA	8	NA	TRUE	NA	NA	NA	B	coding	733	2202	232	2433	15.0	-27	True	ATTAAA	-14
PB.11145.15	chr8	+	3131	8	incomplete-splice_match	SDCBP	ENST00000260130.8	2167	9	95	18	2	-4	intron_retention	FALSE	canonical	1	278688	junction_5	313562.6537695132	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	56	901	20.0	3	True	AATAAA	-3
PB.3820.5	chr15	-	7182	26	novel_in_catalog	TP53BP1	novel	10384	28	NA	NA	0	-1	intron_retention	FALSE	canonical	1	141913	junction_25	72034.03259175763	NA	4	NA	TRUE	NA	NA	NA	C	coding	1386	4161	114	4274	20.0	-2	True	AATAAA	-23
PB.3820.2	chr15	-	6363	29	novel_in_catalog	TP53BP1	novel	10384	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12929	junction_15	95675.30246577937	NA	0	NA	TRUE	NA	NA	NA	C	coding	950	2853	114	2966	20.0	-2	True	AATAAA	-24
PB.3820.3	chr15	-	6226	28	full-splice_match	TP53BP1	ENST00000382044.8	10384	28	3	4155	3	0	multi-exon	FALSE	canonical	1	141913	junction_27	69739.09609561338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1977	5934	126	6059	20.0	-14	False	AATAAA	-24
PB.935.1	chr1	-	3253	2	antisense	novelGene_DNM3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	6	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	NA	False	NA	NA
PB.3820.8	chr15	-	6057	28	full-splice_match	TP53BP1	ENST00000382044.8	10384	28	3	4324	3	-169	multi-exon	FALSE	canonical	1	141913	junction_27	69739.09609561338	NA	0	NA	TRUE	NA	NA	NA	C	coding	1977	5931	126	6056	30.0	-14	False	TATAAA	-20
PB.3820.9	chr15	-	4345	19	incomplete-splice_match	TP53BP1	ENST00000572085.5	5574	23	-1	6502	-1	-52	3prime_fragment	FALSE	canonical	1	141913	junction_18	56403.99952899869	NA	0	NA	TRUE	NA	NA	NA	C	coding	1386	4161	115	4275	10.0	-3	True	ATTAAA	-23
PB.7523.2	chr21	-	6669	41	full-splice_match	BRWD1	ENST00000342449.7	12929	41	-69	6329	3	-2731	multi-exon	FALSE	canonical	1	78313	junction_36	28548.79558307802	NA	3	NA	TRUE	NA	NA	NA	C	coding	2173	6519	149	6667	70.0	-8	True	NA	NA
PB.7523.3	chr21	-	5767	40	incomplete-splice_match	BRWD1	ENST00000380800.7	7605	42	-46	4977	6	625	3prime_fragment	FALSE	canonical	1	78313	junction_35	28868.92772913659	NA	0	NA	TRUE	NA	NA	NA	C	coding	1874	5622	146	5767	75.0	-5	True	NA	NA
PB.7523.1	chr21	-	7087	41	full-splice_match	BRWD1	ENST00000342449.7	12929	41	-62	5904	10	-2306	multi-exon	FALSE	canonical	1	78313	junction_36	28548.79558307802	NA	11	NA	TRUE	NA	NA	NA	C	coding	2269	6810	142	6951	30.0	-1	True	AATATA	-36
PB.7523.6	chr21	-	4944	22	novel_in_catalog	BRWD1	novel	10141	42	NA	NA	-5	77	intron_retention	FALSE	canonical	1	83380	junction_15	28577.38132877079	NA	10	NA	TRUE	NA	NA	NA	C	coding	768	2304	2639	4942	70.0	-16	True	NA	NA
PB.7523.7	chr21	-	2463	20	incomplete-splice_match	BRWD1	ENST00000380800.7	7605	42	-49	57013	3	-14111	3prime_fragment	FALSE	canonical	1	78313	junction_15	28785.264464157142	NA	0	NA	TRUE	NA	NA	NA	C	coding	771	2313	149	2461	55.0	-8	True	AAGAAA	-16
PB.7523.4	chr21	-	2919	24	novel_not_in_catalog	BRWD1	novel	10141	42	NA	NA	12	77	any annotated donor/acceptor	FALSE	canonical	1	6715	junction_15	43560.06319688306	NA	0	NA	TRUE	NA	NA	NA	C	coding	626	1878	1040	2917	70.0	1	True	NA	NA
PB.7523.5	chr21	-	2857	23	incomplete-splice_match	BRWD1	ENST00000380800.7	7605	42	-38	42824	14	77	3prime_fragment	FALSE	canonical	1	78313	junction_18	29663.73820727509	NA	1	NA	TRUE	NA	NA	NA	C	coding	906	2718	138	2855	70.0	3	True	NA	NA
PB.9053.1	chr4	-	1847	7	novel_not_in_catalog	TMEM192	novel	10012	6	NA	NA	-13	1308	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	82097.50998186378	NA	0	NA	TRUE	NA	NA	NA	C	coding	271	816	95	910	45.0	-8	True	AATAAA	-23
PB.8547.4	chr3	-	3103	7	novel_not_in_catalog	LAMP3	novel	3375	6	NA	NA	138	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	55252.83170621715	NA	7	1	TRUE	NA	NA	NA	C	coding	394	1185	90	1274	25.0	6887	False	AATAAA	-13
PB.7523.8	chr21	-	3505	19	incomplete-splice_match	BRWD1	ENST00000380800.7	7605	42	-58	60735	-6	-17833	3prime_fragment	FALSE	canonical	1	78313	junction_14	29531.035738317372	NA	4	NA	TRUE	NA	NA	NA	C	coding	814	2445	158	2602	35.0	-17	True	NA	NA
PB.7523.9	chr21	-	2443	5	full-splice_match	BRWD1	ENST00000341322.4	2495	5	8	44	8	-44	multi-exon	FALSE	canonical	1	86520	junction_3	39170.94731669762	NA	2	NA	TRUE	NA	NA	NA	C	coding	120	363	144	506	35.0	-3	True	AATAAA	-25
PB.8547.1	chr3	-	3406	6	full-splice_match	LAMP3	ENST00000265598.7	3375	6	176	-207	147	207	multi-exon	FALSE	canonical	1	69476	junction_5	31566.21126837999	NA	0	NA	TRUE	NA	NA	NA	C	coding	416	1251	81	1331	30.0	-2	True	ATTAAA	-27
PB.7922.2	chr3	-	2383	8	novel_in_catalog	TADA3	novel	2355	9	NA	NA	-8	-7	intron_retention	FALSE	canonical	1	681145	junction_3	118157.26757735615	NA	0	NA	TRUE	NA	NA	NA	C	coding	207	624	1377	2000	45.0	-8	False	AATAAA	-20
PB.8456.1	chr3	+	2954	3	full-splice_match	ZIC1	ENST00000282928.4	5241	3	-70	2357	-70	682	multi-exon	FALSE	canonical	1	126772	junction_1	46223.5	NA	4	NA	TRUE	NA	NA	NA	A	coding	447	1344	800	2143	15.0	-4755	False	ATTAAA	-16
PB.11088.5	chr8	-	6439	6	full-splice_match	RAB11FIP1	ENST00000330843.8	7811	6	-40	1412	-27	-1412	multi-exon	FALSE	canonical	1	74852	junction_3	117602.85530955446	NA	3	NA	TRUE	NA	NA	NA	C	coding	1283	3852	54	3905	85.0	2	True	NA	NA
PB.6583.2	chr2	+	2270	2	antisense	novelGene_GCFC2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	160	junction_1	0.0	NA	0	NA	FALSE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	27	False	TATAAA	-41
PB.8645.3	chr4	+	3894	13	full-splice_match	PIGG	ENST00000453061.6	3218	13	-9	-667	0	0	multi-exon	FALSE	canonical	1	91647	junction_10	46665.01979437834	NA	1	NA	TRUE	NA	NA	NA	C	coding	983	2952	116	3067	25.0	-19	True	NA	NA
PB.9053.2	chr4	-	2618	6	full-splice_match	TMEM192	ENST00000306480.10	10012	6	54	7340	-11	472	multi-exon	FALSE	canonical	1	152292	junction_5	35690.43925423166	NA	2	NA	TRUE	NA	NA	NA	C	coding	271	816	93	908	85.0	-6	True	NA	NA
PB.6100.1	chr19	+	5628	7	novel_not_in_catalog	ARHGAP35	novel	7696	7	NA	NA	-57669	0	any annotated donor/acceptor	FALSE	canonical	1	145885	junction_1	143442.27488397167	NA	1	NA	TRUE	NA	NA	NA	B	coding	1497	4494	398	4891	55.0	0	True	ATTAAA	-17
PB.6100.2	chr19	+	3627	7	novel_not_in_catalog	ARHGAP35	novel	7696	7	NA	NA	457	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	191812.21670664428	NA	0	NA	TRUE	NA	NA	NA	B	coding	941	2826	67	2892	55.0	-8337	False	ATTAAA	-15
PB.5175.9	chr17	-	2118	13	full-splice_match	CCDC47	ENST00000225726.9	3466	13	199	1149	-6	4	multi-exon	FALSE	canonical	1	526054	junction_12	252003.7012037913	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	185	1636	35.0	20	True	AATAAA	-21
PB.5175.8	chr17	-	3072	13	full-splice_match	CCDC47	ENST00000225726.9	3466	13	195	199	-10	-199	multi-exon	FALSE	canonical	1	526054	junction_12	252003.7012037913	NA	0	NA	TRUE	NA	NA	NA	C	coding	483	1452	189	1640	35.0	16	True	ATTAAA	-34
PB.9002.13	chr4	-	2827	22	novel_in_catalog	INPP4B	novel	8831	27	NA	NA	-41	19	combination_of_known_junctions	FALSE	canonical	1	295	junction_19	46819.62768931409	NA	0	NA	TRUE	NA	NA	NA	B	coding	821	2466	306	2771	5.0	557	False	AATAAA	-36
PB.7279.1	chr20	+	1994	17	full-splice_match	RPN2	ENST00000237530.10	2515	17	286	235	2	-29	multi-exon	FALSE	canonical	1	1567056	junction_1	530338.7358612035	NA	0	NA	TRUE	NA	NA	NA	C	coding	631	1896	26	1921	80.0	2	True	AAGAAA	-30
PB.7279.2	chr20	+	1800	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	1	-30	no_combination_of_known_junctions	FALSE	canonical	1	1568	junction_1	873933.4378593422	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	487	1728	80.0	1	True	AAGAAA	-29
PB.5175.2	chr17	-	3268	13	full-splice_match	CCDC47	ENST00000225726.9	3466	13	185	13	-20	-13	multi-exon	FALSE	canonical	1	526054	junction_12	252003.7012037913	NA	30	NA	TRUE	NA	NA	NA	C	coding	483	1452	199	1650	35.0	6	True	ATTAAA	-6
PB.7279.4	chr20	+	3460	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	5	-2	intron_retention	FALSE	canonical	1	1567056	junction_1	547596.4597232122	NA	1	NA	TRUE	NA	NA	NA	C	coding	501	1506	35	1540	40.0	-7	True	AATAAA	-16
PB.7279.5	chr20	+	2521	18	novel_in_catalog	RPN2	novel	791	6	NA	NA	36	-2	combination_of_known_junctions	FALSE	canonical	1	52005	junction_4	1107201.111965369	NA	1	NA	TRUE	NA	NA	NA	C	coding	647	1944	276	2219	40.0	-248	False	AATAAA	-16
PB.7279.6	chr20	+	2172	16	novel_in_catalog	RPN2	novel	791	6	NA	NA	42	-19	no_combination_of_known_junctions	FALSE	canonical	1	5307	junction_14	925301.1722857951	NA	8	2	TRUE	NA	NA	NA	C	coding	577	1734	270	2003	65.0	-242	False	AAGAAA	-40
PB.5175.6	chr17	-	3446	14	novel_not_in_catalog	AC046185.1	novel	2128	12	NA	NA	-21491	-42415	intron_retention	FALSE	canonical	1	1634	junction_5	479045.6770000517	NA	0	NA	TRUE	NA	NA	NA	A	coding	345	1038	197	1234	30.0	8	True	ATTAAA	-9
PB.1608.2	chr10	+	3081	12	full-splice_match	SFXN3	ENST00000224807.9	3089	12	12	-4	12	0	multi-exon	TRUE	canonical	1	75068	junction_1	108116.69834485206	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	457	1422	10.0	17	True	AATAAA	-19
PB.1608.3	chr10	+	4286	11	novel_in_catalog	SFXN3	novel	3098	12	NA	NA	14	0	intron_retention	FALSE	canonical	1	75068	junction_1	103899.6962419044	NA	0	NA	TRUE	NA	NA	NA	C	coding	370	1113	455	1567	15.0	19	True	AATAAA	-15
PB.11045.1	chr8	-	3204	2	full-splice_match	SDAD1P1	ENST00000519902.1	3174	2	-44	14	-44	-14	multi-exon	FALSE	canonical	1	9521	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	178	537	2151	2687	40.0	-20	True	ATTAAA	-24
PB.1608.1	chr10	+	3136	12	novel_in_catalog	SFXN3	novel	3098	12	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	1	17761	junction_6	137051.62147445342	NA	2	1	TRUE	NA	NA	NA	C	coding	177	534	457	990	10.0	17	True	AATAAA	-18
PB.1608.4	chr10	+	2672	11	incomplete-splice_match	SFXN3	ENST00000224807.9	3089	12	1200	-4	1200	0	5prime_fragment	FALSE	canonical	1	203570	junction_8	71464.5948844601	NA	1	NA	TRUE	NA	NA	NA	C	coding	321	966	48	1013	10.0	0	True	AATAAA	-19
PB.11145.10	chr8	+	2175	10	novel_not_in_catalog	SDCBP	novel	556	3	NA	NA	-1	0	any annotated donor/acceptor	FALSE	canonical	1	4628	junction_2	386132.9337312171	NA	1	NA	TRUE	NA	NA	NA	C	coding	241	726	331	1056	20.0	-1	True	AATAAA	-20
PB.9804.1	chr6	+	1383	3	full-splice_match	ABT1	ENST00000274849.2	2949	3	-31	1597	-31	-1597	multi-exon	FALSE	canonical	1	565749	junction_2	4252.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	63	881	10.0	-5812	False	AATAAA	-21
PB.9804.2	chr6	+	2056	2	novel_in_catalog	ABT1	novel	2949	3	NA	NA	-15	-1598	intron_retention	FALSE	canonical	1	565749	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	143	432	1124	1555	10.0	-39	True	AATAAA	-20
PB.9804.3	chr6	+	2951	3	full-splice_match	ABT1	ENST00000274849.2	2949	3	-4	2	-4	-2	multi-exon	FALSE	canonical	1	565749	junction_2	4252.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	36	854	25.0	-28	True	NA	NA
PB.9804.4	chr6	+	2250	3	full-splice_match	ABT1	ENST00000274849.2	2949	3	1	698	1	-698	multi-exon	FALSE	canonical	1	565749	junction_2	4252.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	272	819	31	849	35.0	-23	True	AATAAA	-14
PB.10741.1	chr7	+	1224	5	full-splice_match	AP1S1	ENST00000337619.10	1303	5	77	2	-6	-2	multi-exon	FALSE	canonical	1	1235927	junction_4	148143.01401095497	NA	1	NA	TRUE	NA	NA	NA	A	coding	158	477	39	515	5.0	1	True	AATAAA	-18
PB.8928.1	chr4	+	4396	23	full-splice_match	SEC24B	ENST00000399100.6	3780	23	147	-763	145	-437	multi-exon	FALSE	canonical	1	58591	junction_1	74763.52965824098	NA	4	1	TRUE	NA	NA	NA	C	coding	1183	3552	61	3612	5.0	134	False	ATTAAA	-20
PB.1789.2	chr11	+	5585	3	full-splice_match	TIMM10B	ENST00000254616.10	2840	3	35	-2780	-19	2780	multi-exon	FALSE	canonical	1	390402	junction_2	14155.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	36	347	40.0	-19	True	AATAAA	-18
PB.1789.3	chr11	+	2789	3	full-splice_match	TIMM10B	ENST00000254616.10	2840	3	52	-1	-2	1	multi-exon	FALSE	canonical	1	390402	junction_2	14155.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	19	330	5.0	-2	True	AATAAA	-16
PB.7408.4	chr20	+	6126	9	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	21	-8	intron_retention	FALSE	canonical	1	175048	junction_2	43911.36692247236	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	4666	5037	45.0	-415	False	ATTAAA	-7
PB.1789.1	chr11	+	1181	3	full-splice_match	TIMM10B	ENST00000254616.10	2840	3	34	1625	-20	-4	multi-exon	FALSE	canonical	1	390402	junction_2	14155.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	103	312	37	348	25.0	-20	True	AGTAAA	-8
PB.7408.2	chr20	+	3621	11	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	3	-7	intron_retention	FALSE	canonical	1	11730	junction_2	80782.94972511216	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	2160	2531	45.0	-433	False	ATTAAA	-8
PB.7408.3	chr20	+	3691	11	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	15	-8	intron_retention	FALSE	canonical	1	142234	junction_2	56298.33377108065	NA	0	NA	TRUE	NA	NA	NA	C	coding	216	651	170	820	45.0	-421	False	ATTAAA	-7
PB.1789.4	chr11	+	2953	2	full-splice_match	TIMM10B	ENST00000528908.1	593	2	35	-2395	28	1	multi-exon	FALSE	canonical	1	390402	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	109	330	1096	1425	5.0	-3630	False	AATAAA	-16
PB.7408.1	chr20	+	2630	14	novel_in_catalog	SLC17A9	novel	3580	13	NA	NA	-4	-8	combination_of_known_junctions	TRUE	canonical	1	16872	junction_6	97478.16615921391	NA	0	NA	TRUE	NA	NA	NA	C	coding	284	855	269	1123	45.0	-440	False	ATTAAA	-7
PB.4182.1	chr16	+	3656	1	genic	PDPK1	novel	NA	NA	NA	NA	93	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	127	384	2	385	5.0	-4048	False	AATAAA	-18
PB.4182.2	chr16	+	3003	1	incomplete-splice_match	PDPK1	ENST00000342085.8	7241	14	62220	2	743	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	-3398	False	AATAAA	-15
PB.7408.8	chr20	+	3652	12	novel_not_in_catalog	SLC17A9	novel	3580	13	NA	NA	-27	-8	intron_retention	FALSE	canonical	1	11730	junction_3	106035.65852950187	NA	0	NA	TRUE	NA	NA	NA	C	coding	123	372	2192	2563	45.0	-29	True	ATTAAA	-7
PB.6209.1	chr19	-	2090	1	full-splice_match	LENG9	ENST00000611161.1	1916	1	-113	-61	-113	61	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	coding	478	1437	299	1735	25.0	9722	False	AATAAA	-25
PB.6402.6	chr2	+	4764	13	novel_in_catalog	SLC30A6	novel	4758	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	37001	junction_8	45114.49861763769	NA	0	NA	TRUE	NA	NA	NA	C	coding	264	795	584	1378	25.0	-5	True	ATTAAA	-33
PB.4003.1	chr15	-	4760	32	novel_in_catalog	SCAPER	novel	5028	32	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	38195	junction_22	34920.23061370678	NA	0	NA	TRUE	NA	NA	NA	C	coding	1405	4218	107	4324	30.0	-3	True	AATAAA	-17
PB.4003.2	chr15	-	4643	32	full-splice_match	SCAPER	ENST00000563290.5	5028	32	-5	390	-3	-97	multi-exon	FALSE	canonical	1	64041	junction_31	32964.51300701714	NA	0	NA	TRUE	NA	NA	NA	C	coding	1399	4200	105	4304	15.0	-1	True	AATAAA	-17
PB.4003.3	chr15	-	2709	21	incomplete-splice_match	SCAPER	ENST00000563290.5	5028	32	-17	317798	-1	37264	3prime_fragment	FALSE	canonical	1	64041	junction_20	37067.34119582223	NA	0	NA	TRUE	NA	NA	NA	C	coding	864	2592	117	2708	80.0	-13	True	NA	NA
PB.4003.4	chr15	-	2384	19	incomplete-splice_match	SCAPER	ENST00000563290.5	5028	32	-4	355062	-2	0	3prime_fragment	FALSE	canonical	1	64041	junction_18	37661.73381350766	NA	1	NA	TRUE	NA	NA	NA	C	coding	760	2280	104	2383	70.0	0	True	NA	NA
PB.6402.5	chr2	+	4819	14	full-splice_match	SLC30A6	ENST00000282587.9	5089	14	2	268	2	-1	multi-exon	FALSE	canonical	1	91258	junction_1	29624.684274751322	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	36	1421	35.0	1	True	ATTAAA	-45
PB.3115.15	chr13	-	4773	1	novel_in_catalog	PROSER1	novel	5168	13	NA	NA	-36	-4069	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	3	True	NA	NA
PB.3115.14	chr13	-	5024	1	novel_in_catalog	PROSER1	novel	5168	13	NA	NA	114	-3907	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	100	False	NA	NA
PB.6402.4	chr2	+	3533	14	full-splice_match	SLC30A6	ENST00000282587.9	5089	14	2	1554	2	1085	multi-exon	FALSE	canonical	1	91258	junction_1	29624.684274751322	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	36	1421	20.0	1	True	ACTAAA	-29
PB.3115.11	chr13	-	3520	11	novel_in_catalog	PROSER1	novel	5168	13	NA	NA	-35	-4	no_combination_of_known_junctions	FALSE	canonical	1	9478	junction_4	99210.68006626103	NA	0	NA	TRUE	NA	NA	NA	C	coding	639	1920	1380	3299	35.0	4	True	AATAAA	-21
PB.3115.10	chr13	-	3863	12	full-splice_match	PROSER1	ENST00000625998.2	5102	12	-39	1278	-39	-4	multi-exon	FALSE	canonical	1	22230	junction_11	101613.38019934771	NA	3	NA	TRUE	NA	NA	NA	C	coding	922	2769	874	3642	35.0	-53	True	AATAAA	-21
PB.3115.13	chr13	-	2597	5	incomplete-splice_match	PROSER1	ENST00000352251.7	5168	13	188	16779	-51	1582	3prime_fragment	FALSE	canonical	1	195977	junction_4	54327.719606914296	NA	0	NA	TRUE	NA	NA	NA	C	coding	126	381	647	1027	45.0	-12	True	AATAAA	-19
PB.7472.4	chr21	-	3593	9	novel_not_in_catalog	MRPL39	novel	1110	10	NA	NA	12	3170	any annotated donor/acceptor	FALSE	canonical	1	2235	junction_1	222576.83111442102	NA	4	NA	TRUE	NA	NA	NA	C	coding	331	996	31	1026	20.0	-25	True	AATAAA	-17
PB.7472.1	chr21	-	3987	10	full-splice_match	MRPL39	ENST00000352957.8	1110	10	3	-2880	3	2880	multi-exon	FALSE	canonical	1	326846	junction_3	135099.86334148858	NA	2	NA	TRUE	NA	NA	NA	C	coding	338	1017	40	1056	20.0	-34	False	NA	NA
PB.7472.3	chr21	-	4169	9	novel_in_catalog	MRPL39	novel	1110	10	NA	NA	13	-8	intron_retention	FALSE	canonical	1	326846	junction_2	143277.78644728698	NA	1	NA	TRUE	NA	NA	NA	C	coding	330	993	30	1022	30.0	-24	True	AATAAA	-12
PB.7472.2	chr21	-	1124	10	full-splice_match	MRPL39	ENST00000352957.8	1110	10	-22	8	-22	-8	multi-exon	FALSE	canonical	1	326846	junction_3	135099.86334148858	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	65	1081	30.0	-59	False	AATAAA	-12
PB.11145.12	chr8	+	3663	11	novel_not_in_catalog	SDCBP	novel	556	3	NA	NA	0	-1	any annotated donor/acceptor	TRUE	canonical	1	585	junction_2	397350.7494634432	NA	0	NA	TRUE	NA	NA	NA	C	coding	304	915	1632	2546	20.0	0	True	AATAAA	-18
PB.6178.3	chr19	-	3553	4	full-splice_match	ZNF616	ENST00000600228.5	4335	4	-21	803	-16	-803	multi-exon	FALSE	canonical	1	50178	junction_1	2551.94884135417	NA	0	NA	TRUE	NA	NA	NA	C	coding	781	2346	284	2629	45.0	-1	True	AATAAA	-24
PB.6332.1	chr2	-	4193	2	full-splice_match	TTC32	ENST00000495698.1	710	2	-3199	-284	-35	11	multi-exon	FALSE	canonical	1	217149	junction_1	0.0	NA	6	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-1	True	ATTAAA	-27
PB.6332.2	chr2	-	3905	2	full-splice_match	TTC32	ENST00000495698.1	710	2	-3198	3	-34	-3	multi-exon	FALSE	canonical	1	217149	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	0	True	AAAACA	-14
PB.11538.14	chr9	+	2521	18	novel_not_in_catalog	MELK	novel	2485	18	NA	NA	15	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_6	145015.4179611358	NA	18	2	TRUE	NA	NA	NA	C	coding	212	639	1540	2178	10.0	-19	True	AATAAA	-15
PB.9215.14	chr5	+	2311	14	incomplete-splice_match	NNT	ENST00000344920.8	4310	22	66	51922	-6	-270	3prime_fragment	FALSE	canonical	1	242335	junction_1	93632.72969060343	NA	1	NA	TRUE	NA	NA	NA	C	coding	696	2091	156	2246	30.0	7	True	ATTAAA	-13
PB.9215.15	chr5	+	4243	22	full-splice_match	NNT	ENST00000344920.8	4310	22	67	0	-5	0	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	0	NA	TRUE	NA	NA	NA	C	coding	1086	3261	155	3415	30.0	8	True	AATAAA	-20
PB.9215.12	chr5	+	4630	23	novel_not_in_catalog	NNT	novel	708	4	NA	NA	-15	3	any annotated donor/acceptor	FALSE	canonical	1	8388	junction_3	183927.46000188176	NA	1	NA	TRUE	NA	NA	NA	C	coding	955	2868	678	3545	25.0	-2	True	AGTAAA	-17
PB.9215.13	chr5	+	6233	22	full-splice_match	NNT	ENST00000344920.8	4310	22	59	-1982	-13	-191	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	1	NA	TRUE	NA	NA	NA	C	coding	1086	3261	163	3423	60.0	0	True	AATAAA	-41
PB.9215.10	chr5	+	5433	22	full-splice_match	NNT	ENST00000344920.8	4310	22	76	-1199	4	945	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	2	NA	TRUE	NA	NA	NA	C	coding	1086	3261	146	3406	45.0	17	True	TATAAA	-5
PB.9215.11	chr5	+	4591	22	full-splice_match	NNT	ENST00000344920.8	4310	22	54	-335	-18	81	multi-exon	FALSE	canonical	1	242335	junction_1	126710.45668705196	NA	2	NA	TRUE	NA	NA	NA	C	coding	1086	3261	168	3428	25.0	-5	True	AATATA	-25
PB.717.5	chr1	+	3482	12	novel_in_catalog	VPS45	novel	2315	15	NA	NA	2	0	intron_retention	FALSE	canonical	1	221556	junction_3	65569.70725788166	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	1780	2952	30.0	-19	True	AATAAA	-19
PB.717.4	chr1	+	2773	14	novel_in_catalog	VPS45	novel	2315	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	221556	junction_3	66989.46181700929	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	1071	2243	30.0	-22	True	AATAAA	-19
PB.717.7	chr1	+	4142	11	novel_in_catalog	VPS45	novel	2315	15	NA	NA	11	0	intron_retention	FALSE	canonical	1	221556	junction_2	67171.94685164336	NA	0	NA	TRUE	NA	NA	NA	C	coding	390	1173	2440	3612	30.0	0	True	AATAAA	-19
PB.717.6	chr1	+	2058	14	novel_in_catalog	VPS45	novel	2315	15	NA	NA	0	5704	combination_of_known_junctions	FALSE	canonical	1	16778	junction_13	105483.2978305433	NA	0	NA	TRUE	NA	NA	NA	C	coding	503	1512	83	1594	85.0	-11	True	NA	NA
PB.717.1	chr1	+	2283	15	full-splice_match	VPS45	ENST00000644510.2	2328	15	42	3	5	0	multi-exon	FALSE	canonical	1	221556	junction_3	65168.45223228829	NA	0	NA	TRUE	NA	NA	NA	C	coding	570	1713	41	1753	30.0	-56	False	AATAAA	-19
PB.717.3	chr1	+	2771	14	incomplete-splice_match	VPS45	ENST00000644510.2	2328	15	-12	33650	-2	18051	3prime_fragment	FALSE	canonical	1	221556	junction_3	65188.124801773505	NA	5	NA	TRUE	NA	NA	NA	C	coding	542	1629	95	1723	25.0	-23	True	ATTAAA	-18
PB.10436.30	chr7	-	1797	13	incomplete-splice_match	IGF2BP3	ENST00000258729.7	4250	15	-25	3425	-25	-1261	3prime_fragment	FALSE	canonical	1	18878	junction_8	40663.3811359769	NA	0	NA	TRUE	NA	NA	NA	C	coding	471	1413	383	1795	70.0	-2	True	NA	NA
PB.8735.14	chr4	-	2768	3	novel_not_in_catalog	TLR1	novel	619	4	NA	NA	-16	-4	any annotated donor/acceptor	FALSE	canonical	1	137	junction_2	177.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	786	2361	224	2584	40.0	49	True	ATTAAA	-16
PB.11329.1	chr8	+	2038	1	full-splice_match	TRMT12	ENST00000328599.4	2207	1	-5	174	-5	111	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	439	1320	141	1460	50.0	-5	True	AATAAA	-12
PB.9911.7	chr6	+	4483	13	novel_in_catalog	BRD2	novel	4894	13	NA	NA	6	23	intron_retention	FALSE	canonical	1	16968	junction_1	652015.212200392	NA	1	NA	TRUE	NA	NA	NA	C	coding	801	2406	1487	3892	30.0	-9916	False	AATAAA	-15
PB.9532.10	chr5	+	2874	11	novel_in_catalog	DELE1	novel	4970	12	NA	NA	-7	5	intron_retention	FALSE	canonical	1	22005	junction_10	150417.6652758578	NA	3	NA	TRUE	NA	NA	NA	C	coding	389	1170	95	1264	20.0	5	True	AATAAA	-20
PB.10220.9	chr6	+	5386	19	full-splice_match	EYA4	ENST00000525849.6	2767	19	-46	-2573	-1	-9	multi-exon	FALSE	canonical	1	23365	junction_18	9826.730343655187	NA	0	NA	TRUE	NA	NA	NA	C	coding	616	1851	231	2081	15.0	3	True	AATAAA	-20
PB.9418.4	chr5	+	2286	13	full-splice_match	GRAMD2B	ENST00000544396.5	2822	13	286	250	-9	-250	multi-exon	FALSE	canonical	1	7624	junction_2	58799.127820144764	NA	1	NA	TRUE	NA	NA	NA	C	coding	323	972	360	1331	20.0	5	True	AATAAA	-22
PB.11466.16	chr9	-	2590	11	novel_not_in_catalog	PSIP1	novel	3364	16	NA	NA	17	-240	any annotated donor/acceptor	FALSE	canonical	1	31485	junction_1	215039.2391828989	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	295	1290	50.0	-3	True	NA	NA
PB.6885.15	chr2	-	4318	31	full-splice_match	NCKAP1	ENST00000361354.8	20347	31	146	15883	146	-121	multi-exon	FALSE	canonical	1	410055	junction_30	243991.209262021	NA	2	NA	TRUE	NA	NA	NA	C	coding	1128	3387	228	3614	40.0	6	True	AATAAA	-16
PB.7045.4	chr2	-	7291	56	novel_in_catalog	DOCK10	novel	7288	56	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	1	32401	junction_22	48142.6110051658	NA	34	3	TRUE	NA	NA	NA	C	coding	2171	6516	146	6661	20.0	2	True	AATAAA	-18
PB.9418.2	chr5	+	2787	14	novel_in_catalog	GRAMD2B	novel	2196	14	NA	NA	-36	-3	intron_retention	FALSE	canonical	1	11322	junction_1	56219.5200149384	NA	1	NA	TRUE	NA	NA	NA	C	coding	416	1251	335	1585	20.0	-453	False	AATAAA	-25
PB.2793.8	chr12	-	2046	3	full-splice_match	DUSP6	ENST00000279488.7	4400	3	942	1412	76	-275	multi-exon	FALSE	canonical	1	465096	junction_1	28147.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	330	1436	80.0	1632	False	AAGAAA	-37
PB.2793.9	chr12	-	3858	1	novel_in_catalog	DUSP6	novel	4400	3	NA	NA	-4	-275	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	161	486	502	987	80.0	-5	True	AAGAAA	-37
PB.6138.1	chr19	+	662	8	full-splice_match	RPL13A	ENST00000391857.8	1181	8	51	468	2	-3	multi-exon	FALSE	canonical	1	10887	junction_7	3760949.4958853684	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	26	637	5.0	-3	True	AATAAA	-16
PB.9418.1	chr5	+	2723	14	full-splice_match	GRAMD2B	ENST00000285689.7	3175	14	241	211	-19	-1	multi-exon	FALSE	canonical	1	152989	junction_3	26819.927249944354	NA	0	NA	TRUE	NA	NA	NA	C	coding	432	1299	221	1519	15.0	-22	True	AATAAA	-27
PB.6138.2	chr19	+	1120	8	full-splice_match	RPL13A	ENST00000391857.8	1181	8	54	7	0	0	multi-exon	FALSE	canonical	1	10887	junction_7	3760949.4958853684	NA	0	NA	TRUE	NA	NA	NA	C	coding	203	612	23	634	30.0	0	True	AATAAA	-9
PB.2793.2	chr12	-	3822	2	novel_in_catalog	DUSP6	novel	4400	3	NA	NA	0	307	intron_retention	FALSE	canonical	1	521391	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	270	813	498	1310	35.0	-1	True	AATAAA	-19
PB.11934.20	chrM	+	1462	1	full-splice_match	MT-ND4	ENST00000361381.2	1378	1	-84	0	-84	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	50.0	-15	True	NA	NA
PB.2793.1	chr12	-	2986	3	full-splice_match	DUSP6	ENST00000279488.7	4400	3	776	638	2	499	multi-exon	TRUE	canonical	1	465096	junction_1	28147.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	496	1602	25.0	1	True	AATAAA	-19
PB.2793.6	chr12	-	1995	3	full-splice_match	DUSP6	ENST00000279488.7	4400	3	1268	1137	402	0	multi-exon	FALSE	canonical	1	465096	junction_1	28147.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	4	1110	85.0	0	True	NA	NA
PB.2793.7	chr12	-	4133	1	novel_in_catalog	DUSP6	novel	4400	3	NA	NA	-4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	158	477	1452	1928	85.0	-5	True	NA	NA
PB.2793.4	chr12	-	2515	3	full-splice_match	DUSP6	ENST00000279488.7	4400	3	1054	831	188	306	multi-exon	FALSE	canonical	1	465096	junction_1	28147.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	368	1107	218	1324	35.0	1744	False	AATAAA	-18
PB.2793.5	chr12	-	4437	1	novel_in_catalog	DUSP6	novel	4400	3	NA	NA	-2	306	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	158	477	1450	1926	35.0	-3	True	AATAAA	-18
PB.1060.1	chr1	-	3388	7	full-splice_match	NUAK2	ENST00000367157.4	3441	7	47	6	47	-6	multi-exon	FALSE	canonical	1	69598	junction_3	14625.91293351936	NA	2	NA	TRUE	NA	NA	NA	A	coding	628	1887	117	2003	15.0	0	True	ATTAAA	-18
PB.2637.9	chr12	+	1595	14	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10359	12095	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	1726767.0855152595	NA	18	4	TRUE	NA	NA	NA	B	coding	353	1062	353	1414	20.0	-2	True	ATTAAA	-25
PB.2637.8	chr12	+	2272	15	full-splice_match	PCBP2	ENST00000546463.5	1457	15	-246	-569	-23	402	multi-exon	FALSE	canonical	1	457962	junction_3	1863319.2450316974	NA	6	1	TRUE	NA	NA	NA	C	coding	362	1089	374	1462	25.0	-8967	False	ACTAAA	-16
PB.2637.5	chr12	+	1671	15	full-splice_match	PCBP2	ENST00000546463.5	1457	15	-274	60	-51	-1	multi-exon	FALSE	canonical	1	457962	junction_3	1863319.2450316974	NA	2	NA	TRUE	NA	NA	NA	C	coding	362	1089	402	1490	20.0	-8995	False	ATTAAA	-25
PB.2637.4	chr12	+	1476	13	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10568	12293	no_combination_of_known_junctions	FALSE	canonical	1	457962	junction_3	1667057.5241867197	NA	2	NA	TRUE	NA	NA	NA	B	coding	317	954	144	1097	25.0	-8737	False	ATTAAA	-39
PB.2637.7	chr12	+	1839	15	novel_not_in_catalog	AC023509.1	novel	1571	13	NA	NA	10323	12303	any annotated donor/acceptor	FALSE	canonical	1	68349	junction_1	1909230.1280686306	NA	2	NA	TRUE	NA	NA	NA	B	coding	361	1086	365	1450	15.0	-8982	False	AATAGA	-17
PB.2637.6	chr12	+	3162	11	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10311	12266	intron_retention	FALSE	non_canonical	0	0	junction_7	859045.8838191415	NA	5	NA	TRUE	NA	NA	NA	B	coding	260	783	401	1183	20.0	-8994	False	ATTAAA	-12
PB.2637.1	chr12	+	2260	15	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10300	8125	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	2011877.5240236851	NA	2	1	TRUE	NA	NA	NA	B	coding	470	1413	412	1824	20.0	-9005	False	AATAAA	-20
PB.2637.3	chr12	+	1707	12	novel_in_catalog	AC023509.1	novel	1571	13	NA	NA	10303	12286	no_combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	849004.52083236	NA	4	1	TRUE	NA	NA	NA	B	coding	308	927	409	1335	35.0	-9002	False	ATTAAA	-32
PB.2637.2	chr12	+	1737	14	full-splice_match	PCBP2	ENST00000359282.9	1730	14	-1	-6	-1	0	multi-exon	FALSE	canonical	1	457962	junction_3	1598952.5562260805	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	352	1347	15.0	-1	True	AATAGA	-18
PB.1117.9	chr1	-	4322	9	full-splice_match	ANGEL2	ENST00000366962.7	4649	9	50	277	50	-277	multi-exon	FALSE	canonical	1	69654	junction_8	53445.3273552457	NA	1	NA	TRUE	NA	NA	NA	C	coding	544	1635	106	1740	30.0	8	True	ATTAAA	-21
PB.701.5	chr1	+	2973	17	full-splice_match	PDE4DIP	ENST00000529945.2	8824	17	1155	4696	1155	35	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	823	2472	165	2636	30.0	-9034	False	AATAAA	-22
PB.8313.7	chr3	-	3321	6	novel_in_catalog	IGSF11	novel	3525	8	NA	NA	11	0	no_combination_of_known_junctions	FALSE	canonical	1	674	junction_3	11390.253493228323	NA	1	NA	TRUE	NA	NA	NA	C	coding	379	1140	296	1435	45.0	-3	True	AATAAA	-14
PB.3062.14	chr13	-	4745	1	novel_in_catalog	MTMR6	novel	5659	14	NA	NA	640	-24004	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	3	NA	NA	NA	NA	NA	C	coding	113	342	123	464	95.0	1	True	NA	NA
PB.6184.1	chr19	+	3495	7	novel_in_catalog	ZNF528	novel	4209	8	NA	NA	-7	-504	combination_of_known_junctions	FALSE	canonical	1	14300	junction_1	30784.776701408042	NA	2	NA	TRUE	NA	NA	NA	B	coding	628	1887	449	2335	20.0	-7	True	NA	NA
PB.10388.1	chr7	+	1223	4	full-splice_match	AIMP2	ENST00000223029.7	1225	4	1	1	1	-1	multi-exon	FALSE	canonical	1	516125	junction_1	154099.80448253514	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	963	119	1081	25.0	-29	True	AATAAA	-16
PB.3062.10	chr13	-	3091	13	novel_in_catalog	MTMR6	novel	5659	14	NA	NA	658	-1783	no_combination_of_known_junctions	FALSE	canonical	1	16301	junction_1	63964.57523027015	NA	2	NA	TRUE	NA	NA	NA	C	coding	535	1608	105	1712	80.0	136	False	TTTAAA	-6
PB.3062.11	chr13	-	3150	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	521	1988	521	-1988	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	0	NA	TRUE	NA	NA	NA	C	coding	621	1866	242	2107	15.0	-1	True	AATAAA	-17
PB.3062.12	chr13	-	3091	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	502	2066	502	-2066	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	3	NA	TRUE	NA	NA	NA	C	coding	621	1866	261	2126	15.0	-20	True	AATGAA	-43
PB.3062.13	chr13	-	2499	14	full-splice_match	MTMR6	ENST00000381801.5	5659	14	521	2639	521	-2639	multi-exon	FALSE	canonical	1	210629	junction_5	21474.17006848408	NA	1	NA	TRUE	NA	NA	NA	C	coding	621	1866	242	2107	30.0	-1	True	AATAAA	-20
PB.3198.4	chr13	+	4492	27	novel_in_catalog	AL137782.1	novel	4128	15	NA	NA	193759	51556	no_combination_of_known_junctions	FALSE	canonical	1	22053	junction_1	135442.46532928606	NA	1	NA	TRUE	NA	NA	NA	B	coding	1064	3195	565	3759	10.0	-29	True	AATAAA	-17
PB.6551.4	chr2	+	1764	12	novel_not_in_catalog	CCT7	novel	556	5	NA	NA	-10	2	any annotated donor/acceptor	FALSE	canonical	1	5424	junction_2	1148342.9690686944	NA	1	NA	TRUE	NA	NA	NA	C	coding	521	1566	54	1619	35.0	8	True	AATAAA	-15
PB.6551.2	chr2	+	2336	11	novel_in_catalog	CCT7	novel	556	5	NA	NA	3	0	intron_retention	FALSE	canonical	1	2079074	junction_1	718976.9809607328	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	982	2193	40.0	-6	True	AATAAA	-13
PB.6551.3	chr2	+	1832	12	full-splice_match	CCT7	ENST00000258091.9	1916	12	84	0	13	0	multi-exon	FALSE	canonical	1	2079074	junction_1	687041.0190714552	NA	1	NA	TRUE	NA	NA	NA	C	coding	543	1632	58	1689	40.0	4	True	AATAAA	-13
PB.6551.1	chr2	+	2895	10	novel_in_catalog	CCT7	novel	556	5	NA	NA	-18	2	intron_retention	FALSE	canonical	1	2079074	junction_1	713533.9732341644	NA	0	NA	TRUE	NA	NA	NA	C	coding	338	1017	91	1107	35.0	-29	True	AATAAA	-15
PB.2572.10	chr12	+	3116	23	full-splice_match	PFKM	ENST00000359794.10	3224	23	119	-11	1	11	multi-exon	FALSE	canonical	1	521765	junction_1	187273.67473505362	NA	5	NA	TRUE	NA	NA	NA	C	coding	780	2343	67	2409	35.0	-15	True	AATAAA	-26
PB.11291.1	chr8	-	2399	1	antisense	novelGene_RIMS2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	65.0	NA	False	AATATA	-40
PB.3119.1	chr13	-	3199	1	antisense	novelGene_COG6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.497.7	chr1	+	3665	10	full-splice_match	PRKACB	ENST00000370685.7	4481	10	-10	826	-10	-822	multi-exon	FALSE	canonical	1	203406	junction_1	114489.41599602607	NA	1	NA	TRUE	NA	NA	NA	C	coding	398	1197	102	1298	60.0	-1021	False	TTTAAA	-37
PB.3198.2	chr13	+	4890	28	novel_in_catalog	AL137782.1	novel	4128	15	NA	NA	69491	51555	no_combination_of_known_junctions	FALSE	canonical	1	35831	junction_1	136611.13323043915	NA	1	NA	TRUE	NA	NA	NA	B	coding	1064	3195	964	4158	15.0	-7	True	AATAAA	-16
PB.11311.4	chr8	+	2257	5	full-splice_match	NOV	ENST00000259526.3	2522	5	144	121	0	-121	multi-exon	FALSE	canonical	1	148346	junction_1	23036.38127370486	NA	0	NA	TRUE	NA	NA	NA	C	coding	357	1074	84	1157	15.0	4	True	ATTAAA	-22
PB.11109.1	chr8	-	2542	14	full-splice_match	PLAT	ENST00000220809.8	2706	14	158	6	-1	-2	multi-exon	FALSE	canonical	1	466569	junction_8	74259.02203446254	NA	11	1	TRUE	NA	NA	NA	C	coding	562	1689	100	1788	40.0	-2	True	AATAAA	-26
PB.11233.9	chr8	-	3487	5	full-splice_match	TRIQK	ENST00000524037.5	865	5	-26	-2596	-6	-2	multi-exon	FALSE	canonical	1	39222	junction_1	71352.57139374866	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	8	True	NA	NA
PB.5885.1	chr19	+	3998	5	novel_not_in_catalog	ZNF730	novel	464	3	NA	NA	30	2736	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	7193.161926440972	NA	0	NA	TRUE	NA	NA	NA	A	coding	503	1512	170	1681	45.0	-57	False	NA	NA
PB.11233.7	chr8	-	3706	6	novel_in_catalog	TRIQK	novel	3672	5	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	22472	junction_3	88538.43685767216	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-1	True	NA	NA
PB.11233.4	chr8	-	3492	4	full-splice_match	TRIQK	ENST00000537541.1	3510	4	14	4	-1	-4	multi-exon	FALSE	canonical	1	9819	junction_3	99151.72713013571	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	13	True	AATAAA	-20
PB.9923.11	chr6	-	2717	18	novel_not_in_catalog	RGL2	novel	2316	15	NA	NA	-31	-8	any annotated donor/acceptor	FALSE	canonical	1	16560	junction_12	182456.4178292627	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	1264	2277	15.0	6335	False	AATAAA	-15
PB.11233.2	chr8	-	3644	5	full-splice_match	TRIQK	ENST00000521988.5	3672	5	26	2	4	0	multi-exon	FALSE	canonical	1	109797	junction_3	47382.331476907086	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	30.0	3	True	AATAAA	-24
PB.10401.6	chr7	+	3241	11	novel_in_catalog	MIOS	novel	3453	13	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	1	7880	junction_1	99469.82448084444	NA	0	NA	TRUE	NA	NA	NA	C	coding	875	2628	478	3105	20.0	11	True	AATAAA	-19
PB.11233.1	chr8	-	3827	6	novel_in_catalog	TRIQK	novel	3672	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	22472	junction_3	88538.43685767216	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	AATAAA	-25
PB.519.5	chr1	+	5723	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	20	378	20	-378	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	3	NA	TRUE	NA	NA	NA	C	coding	984	2955	340	3294	55.0	-31	True	ATTAAA	-25
PB.6207.1	chr19	+	716	5	full-splice_match	RPS9	ENST00000302907.8	829	5	111	2	-5	1	multi-exon	FALSE	canonical	1	3664363	junction_4	1828278.0770632923	NA	0	NA	TRUE	NA	NA	NA	A	coding	194	585	62	646	10.0	-7716	False	AATAAA	-18
PB.519.7	chr1	+	1810	10	incomplete-splice_match	PKN2	ENST00000316005.11	2632	11	17	1380	17	-6	3prime_fragment	FALSE	canonical	1	161215	junction_1	67314.67347878586	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1467	343	1809	60.0	-34	True	NA	NA
PB.519.6	chr1	+	5652	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	17	452	17	-452	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	0	NA	TRUE	NA	NA	NA	C	coding	984	2955	343	3297	25.0	-34	True	ATTAAA	-23
PB.519.1	chr1	+	3554	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	52	2515	52	221	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	1	NA	TRUE	NA	NA	NA	C	coding	984	2955	308	3262	80.0	1	True	NA	NA
PB.11542.4	chr9	+	3605	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	140	775	-16	-775	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	16	True	NA	NA
PB.519.3	chr1	+	4540	22	full-splice_match	PKN2	ENST00000370521.7	6121	22	7	1574	7	1162	multi-exon	FALSE	canonical	1	161215	junction_1	71082.22208218163	NA	4	NA	TRUE	NA	NA	NA	C	coding	984	2955	353	3307	55.0	-1040	False	ATTAAA	-31
PB.519.2	chr1	+	5642	21	full-splice_match	PKN2	ENST00000370513.9	2890	21	-350	-2402	1	-334	multi-exon	TRUE	canonical	1	10894	junction_8	92890.85745185046	NA	2	NA	TRUE	NA	NA	NA	C	coding	936	2811	359	3169	20.0	-1046	False	AATAAA	-14
PB.11542.9	chr9	+	4108	2	full-splice_match	EBLN3P	ENST00000625445.1	4520	2	298	114	142	-114	multi-exon	FALSE	canonical	1	326047	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	174	False	NA	NA
PB.5008.1	chr17	+	1674	3	novel_in_catalog	RPL27	novel	585	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	6670351	junction_1	4461439.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	0	True	NA	NA
PB.5008.2	chr17	+	1580	4	novel_in_catalog	RPL27	novel	585	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	6670351	junction_1	3753327.6182148317	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	80.0	6	True	NA	NA
PB.5008.3	chr17	+	492	5	full-splice_match	RPL27	ENST00000253788.11	505	5	6	7	6	3	multi-exon	FALSE	canonical	1	6670351	junction_1	4751009.054231658	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	50	460	40.0	6	True	ATTAAA	-11
PB.3494.1	chr14	-	2026	9	full-splice_match	ESR2	ENST00000353772.7	2454	9	40	388	-10	4	multi-exon	FALSE	canonical	1	5555	junction_8	1685.2781669504889	NA	1	NA	TRUE	NA	NA	NA	A	coding	495	1488	429	1916	40.0	0	True	AAGAAA	-6
PB.519.8	chr1	+	3475	11	full-splice_match	PKN2	ENST00000316005.11	2632	11	38	-881	38	881	multi-exon	FALSE	canonical	1	161215	junction_1	65251.37256456756	NA	0	NA	TRUE	NA	NA	NA	C	coding	604	1815	322	2136	80.0	-13	True	NA	NA
PB.8076.1	chr3	+	2412	10	full-splice_match	KLHL18	ENST00000232766.5	4620	10	0	2208	0	31	multi-exon	FALSE	canonical	1	90135	junction_6	23201.516746928955	NA	4	NA	TRUE	NA	NA	NA	C	coding	574	1725	21	1745	55.0	2	True	AAAAAG	-8
PB.5094.2	chr17	-	3003	1	novel_in_catalog	ZNF652	novel	4543	8	NA	NA	-2374	-24	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	3701	False	NA	NA
PB.5094.1	chr17	-	3323	1	novel_in_catalog	ZNF652	novel	4543	8	NA	NA	-2694	-24	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	90.0	3381	False	NA	NA
PB.3577.8	chr14	+	2420	14	novel_in_catalog	TTLL5	novel	4168	32	NA	NA	20745	0	combination_of_known_junctions	FALSE	canonical	1	2383	junction_12	58746.59333957942	NA	1	NA	TRUE	NA	NA	NA	C	coding	662	1989	24	2012	5.0	-9272	False	TATAAA	-22
PB.7396.1	chr20	+	2935	7	full-splice_match	MTG2	ENST00000370823.7	2929	7	-21	15	-5	-15	multi-exon	FALSE	canonical	1	17152	junction_1	83469.24226856793	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	40	1260	80.0	-15	True	NA	NA
PB.3577.5	chr14	+	4880	31	novel_in_catalog	FLVCR2	novel	218	2	NA	NA	20516	291864	no_combination_of_known_junctions	FALSE	canonical	1	10927	junction_30	40291.29940444821	NA	6	NA	TRUE	NA	NA	NA	C	coding	1247	3744	498	4241	5.0	-20	True	AATAAA	-15
PB.5189.1	chr17	-	2912	20	novel_not_in_catalog	SMURF2	novel	5892	19	NA	NA	-253	9	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_19	152111.8629224728	NA	1	NA	TRUE	NA	NA	NA	B	coding	748	2247	174	2420	30.0	-15	True	AATAAA	-18
PB.5189.2	chr17	-	2959	21	novel_not_in_catalog	SMURF2	novel	5892	19	NA	NA	-273	9	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_20	179420.155513532	NA	25	3	TRUE	NA	NA	NA	B	coding	507	1524	944	2467	30.0	-35	True	AATAAA	-18
PB.3577.6	chr14	+	4748	33	novel_not_in_catalog	FLVCR2	novel	218	2	NA	NA	20537	291864	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	43674.64516165064	NA	13	3	TRUE	NA	NA	NA	C	coding	856	2571	1546	4116	5.0	1	True	AATAAA	-15
PB.3577.1	chr14	+	4728	32	full-splice_match	TTLL5	ENST00000298832.13	4683	32	-45	0	0	0	multi-exon	FALSE	canonical	1	50203	junction_1	30907.519939651895	NA	0	NA	TRUE	NA	NA	NA	C	coding	1277	3834	263	4096	5.0	-35	True	AATAAA	-15
PB.6486.1	chr2	-	3841	18	full-splice_match	PUS10	ENST00000407787.5	1820	18	-30	-1991	-30	-12	multi-exon	FALSE	canonical	1	11918	junction_17	10999.713287864593	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	91	1680	55.0	-1	True	AATAAA	-7
PB.3577.3	chr14	+	4468	32	full-splice_match	TTLL5	ENST00000298832.13	4683	32	-35	250	10	0	multi-exon	FALSE	canonical	1	50203	junction_1	30907.519939651895	NA	0	NA	TRUE	NA	NA	NA	C	coding	1277	3834	253	4086	5.0	-25	True	TATAAA	-22
PB.3577.2	chr14	+	4507	33	novel_in_catalog	FLVCR2	novel	218	2	NA	NA	20511	291611	no_combination_of_known_junctions	FALSE	canonical	1	33425	junction_19	40688.26858374258	NA	9	3	TRUE	NA	NA	NA	C	coding	1291	3876	253	4128	5.0	-25	True	TATAAA	-19
PB.701.1	chr1	+	3736	24	incomplete-splice_match	PDE4DIP	ENST00000618462.4	8150	46	46	51246	-1	27	3prime_fragment	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	1019	3060	348	3407	30.0	0	True	AATAAA	-14
PB.3206.1	chr13	+	4002	6	intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2046	junction_3	450.37628712000367	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	20.0	-2	True	AATAAA	-29
PB.11687.7	chr9	+	3025	18	full-splice_match	INVS	ENST00000262456.6	2968	18	-30	-27	-11	27	multi-exon	FALSE	canonical	1	43796	junction_14	28471.41516956587	NA	2	NA	TRUE	NA	NA	NA	C	coding	895	2688	197	2884	50.0	2	True	NA	NA
PB.127.2	chr1	-	3672	12	full-splice_match	RCC2	ENST00000375433.3	2030	12	274	-1916	274	0	multi-exon	FALSE	canonical	1	241403	junction_4	82323.91351663388	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	464	1342	10.0	3187	False	AATAAA	-21
PB.454.6	chr1	-	5007	25	novel_in_catalog	JAK1	novel	5047	25	NA	NA	-101232	-1	no_combination_of_known_junctions	FALSE	canonical	1	2175	junction_24	216307.4866284587	NA	1	NA	TRUE	NA	NA	NA	C	coding	1154	3465	211	3675	30.0	9	True	AATAAA	-16
PB.127.3	chr1	-	3759	12	novel_not_in_catalog	RCC2	novel	4087	13	NA	NA	128	0	intron_retention	FALSE	canonical	1	1279	junction_11	142226.7383532772	NA	7	1	TRUE	NA	NA	NA	C	coding	292	879	551	1429	10.0	3041	False	AATAAA	-21
PB.6772.11	chr2	-	2296	15	novel_not_in_catalog	ORC4	novel	6472	13	NA	NA	-3	1599	any annotated donor/acceptor	FALSE	canonical	1	386	junction_1	148575.3540495323	NA	0	NA	TRUE	NA	NA	NA	C	coding	461	1386	115	1500	30.0	7	True	NA	NA
PB.6772.10	chr2	-	2561	14	full-splice_match	ORC4	ENST00000264169.6	6598	14	32	4005	-7	1911	multi-exon	FALSE	canonical	1	10897	junction_13	121476.75564582998	NA	3	1	TRUE	NA	NA	NA	C	coding	436	1311	143	1453	35.0	-22	True	ATTAAA	-24
PB.589.2	chr1	+	1941	12	full-splice_match	SARS	ENST00000369923.4	1882	12	-86	27	-22	1	multi-exon	FALSE	canonical	1	40517	junction_9	796443.1604820344	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	98	1708	15.0	3	True	AATAAA	-18
PB.11823.10	chr9	+	3190	20	novel_in_catalog	ODF2	novel	578	5	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	9318	junction_4	118615.7562349353	NA	2	NA	TRUE	NA	NA	NA	C	coding	748	2247	241	2487	25.0	-5	True	AAAAAG	-15
PB.127.1	chr1	-	3839	12	novel_in_catalog	RCC2	novel	4087	13	NA	NA	-45	0	intron_retention	FALSE	canonical	1	3025	junction_11	141815.2475170797	NA	4	NA	TRUE	NA	NA	NA	C	coding	292	879	631	1509	10.0	1705	False	AATAAA	-21
PB.6772.13	chr2	-	1636	13	full-splice_match	ORC4	ENST00000540442.5	6472	13	-26	4862	0	1054	multi-exon	FALSE	canonical	1	16006	junction_12	125250.04980892778	NA	0	NA	TRUE	NA	NA	NA	C	coding	362	1089	297	1385	25.0	-3	True	AATAAA	-23
PB.4221.1	chr16	-	1393	3	full-splice_match	UBALD1	ENST00000283474.11	1413	3	20	0	20	0	multi-exon	FALSE	canonical	1	318962	junction_2	18621.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	177	534	110	643	10.0	-19	True	NA	NA
PB.701.2	chr1	+	2742	17	full-splice_match	PDE4DIP	ENST00000479408.6	2746	17	32	-28	32	28	multi-exon	FALSE	canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	740	2223	190	2412	35.0	-7410	False	AATAAA	-15
PB.10498.2	chr7	+	2846	6	novel_not_in_catalog	RALA	novel	2880	5	NA	NA	8	-9	any annotated donor/acceptor	FALSE	canonical	1	8921	junction_1	306642.71283603006	NA	0	NA	TRUE	NA	NA	NA	C	coding	206	621	356	976	25.0	1	True	AATAAA	-11
PB.6772.12	chr2	-	2226	14	full-splice_match	ORC4	ENST00000392857.9	6530	14	-12	4316	2	1598	multi-exon	FALSE	canonical	1	233409	junction_13	79550.18580016163	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	121	1431	30.0	1	True	NA	NA
PB.7988.1	chr3	+	2696	9	novel_in_catalog	ZCWPW2	novel	816	6	NA	NA	16	1116	no_combination_of_known_junctions	FALSE	canonical	1	7848	junction_1	2172.403273882407	NA	1	NA	TRUE	NA	NA	NA	A	coding	356	1071	53	1123	25.0	-66	False	GATAAA	-18
PB.7129.1	chr20	+	4832	7	full-splice_match	PSMF1	ENST00000335877.10	4290	7	3	-545	3	545	multi-exon	FALSE	canonical	1	632364	junction_1	385159.8961313196	NA	1	NA	TRUE	NA	NA	NA	C	coding	271	816	174	989	25.0	-20	True	TATAAA	-3
PB.1234.7	chr1	-	7148	20	novel_not_in_catalog	CEP170	novel	6828	20	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_16	143573.12374281164	NA	2	NA	TRUE	NA	NA	NA	B	coding	1594	4785	344	5128	35.0	-9	True	AATAAA	-17
PB.1.2	chr1	-	2521	8	novel_not_in_catalog	WASH7P	novel	1351	11	NA	NA	200	-3	intron_retention	FALSE	canonical	1	576	junction_6	12548.91057309074	NA	4	NA	TRUE	NA	NA	NA	B	coding	180	543	1	543	35.0	NA	False	AATAAA	-12
PB.6772.17	chr2	-	1719	14	full-splice_match	ORC4	ENST00000264169.6	6598	14	12	4867	12	1049	multi-exon	FALSE	canonical	1	10897	junction_13	121476.75564582998	NA	0	NA	TRUE	NA	NA	NA	C	coding	436	1311	163	1473	20.0	-42	True	AATAAA	-18
PB.9281.2	chr5	+	3180	17	incomplete-splice_match	BDP1	ENST00000380675.3	2861	18	-18	-300	-18	300	intron_retention	FALSE	canonical	1	75245	junction_8	26184.7262943376	NA	0	NA	TRUE	NA	NA	NA	B	coding	981	2943	238	3180	50.0	-12	True	AATAGA	-2
PB.12028.5	chrX	-	6087	14	novel_not_in_catalog	BCOR	novel	1945	10	NA	NA	-608	0	any annotated donor/acceptor	FALSE	canonical	1	3806	junction_13	102881.3217131457	NA	0	NA	TRUE	NA	NA	NA	B	coding	1703	5112	122	5233	35.0	-28	False	AATAAA	-18
PB.12028.4	chrX	-	6259	14	novel_in_catalog	BCOR	novel	1945	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	5482	junction_13	109108.7652992925	NA	0	NA	TRUE	NA	NA	NA	B	coding	1737	5214	192	5405	35.0	7	True	AATAAA	-18
PB.12028.7	chrX	-	6117	15	novel_not_in_catalog	BCOR	novel	1945	10	NA	NA	-586	0	any annotated donor/acceptor	FALSE	canonical	1	3806	junction_14	94165.81088230723	NA	2	NA	TRUE	NA	NA	NA	B	coding	1721	5166	100	5265	40.0	-6	True	AATAAA	-16
PB.12028.6	chrX	-	6156	14	novel_in_catalog	BCOR	novel	1945	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	5482	junction_13	102589.9786690377	NA	1	NA	TRUE	NA	NA	NA	B	coding	1703	5112	193	5304	40.0	6	True	AATAAA	-16
PB.12028.1	chrX	-	6252	15	novel_in_catalog	BCOR	novel	1945	10	NA	NA	227	3	combination_of_known_junctions	FALSE	canonical	1	7943	junction_14	100153.3899748485	NA	0	NA	TRUE	NA	NA	NA	B	coding	1755	5268	128	5395	20.0	183	False	AATAAA	-21
PB.9504.1	chr5	+	1524	6	full-splice_match	ZMAT2	ENST00000274712.7	1647	6	108	15	-22	-15	multi-exon	FALSE	canonical	1	653776	junction_1	273315.7080971381	NA	0	NA	TRUE	NA	NA	NA	C	coding	199	600	20	619	30.0	-6	True	AATAAA	-22
PB.12028.3	chrX	-	6255	14	novel_in_catalog	BCOR	novel	1945	10	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	1	81225	junction_13	90750.8863444743	NA	0	NA	TRUE	NA	NA	NA	B	coding	1703	5112	290	5401	35.0	11	True	AATAAA	-18
PB.12028.2	chrX	-	6274	15	novel_not_in_catalog	BCOR	novel	1945	10	NA	NA	-26	3	any annotated donor/acceptor	FALSE	canonical	1	5397	junction_14	93883.6791522806	NA	4	NA	TRUE	NA	NA	NA	B	coding	1721	5166	252	5417	20.0	-30	False	AATAAA	-21
PB.6406.13	chr2	+	2306	13	novel_not_in_catalog	RASGRP3	novel	4738	19	NA	NA	8	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_10	68748.57164213184	NA	5	1	TRUE	NA	NA	NA	C	coding	373	1122	338	1459	90.0	5	True	NA	NA
PB.6406.12	chr2	+	4396	19	novel_in_catalog	RASGRP3	novel	4738	19	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	65167.035341218194	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	461	2533	35.0	4	True	AATAAA	-25
PB.6406.11	chr2	+	2739	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	400	1668	5	-1542	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	341	2413	35.0	2	True	AATGAA	-21
PB.6406.10	chr2	+	3375	18	full-splice_match	RASGRP3	ENST00000403687.7	4807	18	369	1063	0	-937	multi-exon	FALSE	canonical	1	119975	junction_7	40668.055394084586	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	372	2444	60.0	0	True	TTTAAA	-4
PB.6406.17	chr2	+	1862	4	full-splice_match	RASGRP3	ENST00000482857.5	688	4	50	-1224	-2	1224	multi-exon	FALSE	canonical	1	148282	junction_1	38015.96570740597	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	45.0	-2	True	AGTAAA	-3
PB.9779.4	chr6	-	1886	8	novel_not_in_catalog	TDP2	novel	2071	7	NA	NA	32	-1	any annotated donor/acceptor	FALSE	canonical	1	117	junction_7	213337.39336916775	NA	3	1	TRUE	NA	NA	NA	B	coding	309	930	149	1078	15.0	0	True	AATAAA	-14
PB.6406.15	chr2	+	4368	18	novel_in_catalog	RASGRP3	novel	4738	19	NA	NA	-3	-8	no_combination_of_known_junctions	FALSE	canonical	1	9311	junction_12	54390.19392479191	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	323	1612	35.0	-3	True	AATAAA	-22
PB.6406.14	chr2	+	4139	17	novel_in_catalog	RASGRP3	novel	4738	19	NA	NA	-12	0	no_combination_of_known_junctions	FALSE	canonical	1	3347	junction_1	55193.587733172186	NA	2	NA	TRUE	NA	NA	NA	C	coding	690	2073	199	2271	25.0	-12	False	AATAAA	-30
PB.6406.19	chr2	+	2837	18	novel_in_catalog	RASGRP3	novel	4738	19	NA	NA	0	-1536	no_combination_of_known_junctions	FALSE	canonical	1	9311	junction_12	54390.19392479191	NA	1	NA	TRUE	NA	NA	NA	C	coding	429	1290	320	1609	30.0	0	True	AATGAA	-27
PB.6406.18	chr2	+	4261	18	novel_not_in_catalog	RASGRP3	novel	4738	19	NA	NA	0	-18	any annotated donor/acceptor	FALSE	canonical	0	0	junction_7	63814.529320263595	NA	2	NA	TRUE	NA	NA	NA	C	coding	482	1449	963	2411	25.0	0	True	AATAAA	-12
PB.11274.38	chr8	-	2424	15	novel_not_in_catalog	PABPC1	novel	608	3	NA	NA	-1	4	intron_retention	FALSE	non_canonical	0	0	junction_4	2267187.1028999984	NA	33	3	TRUE	NA	NA	NA	C	coding	292	879	506	1384	70.0	-2	True	AAGAAA	-35
PB.11350.1	chr8	-	3214	1	intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	75.0	-3	True	NA	NA
PB.6705.3	chr2	-	3225	16	full-splice_match	SLC35F5	ENST00000245680.6	4412	16	190	997	-13	564	multi-exon	FALSE	canonical	1	216280	junction_7	58636.056904945435	NA	0	NA	TRUE	NA	NA	NA	C	coding	523	1572	225	1796	45.0	8	True	ATTAAA	-4
PB.8601.4	chr3	+	5183	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	30	1184	0	5	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	1	NA	TRUE	NA	NA	NA	C	coding	997	2994	163	3156	15.0	8	True	AATAAA	-17
PB.6705.2	chr2	-	4237	16	full-splice_match	SLC35F5	ENST00000245680.6	4412	16	179	-4	-24	4	multi-exon	FALSE	canonical	1	216280	junction_7	58636.056904945435	NA	1	1	TRUE	NA	NA	NA	C	coding	523	1572	236	1807	5.0	-3	True	AATAGA	-19
PB.10167.1	chr6	-	2240	12	full-splice_match	TUBE1	ENST00000368662.9	2142	12	13	-111	-2	111	multi-exon	FALSE	canonical	1	89624	junction_5	32352.865258679656	NA	1	NA	TRUE	NA	NA	NA	C	coding	475	1428	67	1494	20.0	-19	True	AATAAA	-25
PB.10167.3	chr6	-	2105	12	novel_not_in_catalog	TUBE1	novel	2142	12	NA	NA	3	5	any annotated donor/acceptor	FALSE	canonical	1	4721	junction_6	51300.67259043886	NA	2	NA	TRUE	NA	NA	NA	C	coding	280	843	623	1465	15.0	-25	True	AATAAA	-22
PB.10167.2	chr6	-	2095	12	full-splice_match	TUBE1	ENST00000368662.9	2142	12	-4	51	-4	-51	multi-exon	FALSE	canonical	1	89624	junction_5	32352.865258679656	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	84	1511	30.0	30	False	ATTAAA	-14
PB.10167.5	chr6	-	2074	11	novel_in_catalog	TUBE1	novel	2142	12	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	26385	junction_8	45088.41687795214	NA	2	NA	TRUE	NA	NA	NA	C	coding	400	1203	239	1441	25.0	-24	True	AATAAA	-15
PB.10167.4	chr6	-	2130	12	novel_in_catalog	TUBE1	novel	2142	12	NA	NA	-8	3	no_combination_of_known_junctions	FALSE	canonical	1	1593	junction_8	59167.69557986356	NA	3	NA	TRUE	NA	NA	NA	C	coding	400	1203	290	1492	10.0	-6	True	AATAAA	-20
PB.10167.6	chr6	-	1842	12	full-splice_match	TUBE1	ENST00000368662.9	2142	12	-4	304	-4	184	multi-exon	FALSE	canonical	1	89624	junction_5	32352.865258679656	NA	0	NA	TRUE	NA	NA	NA	C	coding	475	1428	84	1511	35.0	30	False	AATAAA	-13
PB.10602.1	chr7	+	2502	6	full-splice_match	EIF4H	ENST00000353999.6	2503	6	3	-2	0	2	multi-exon	FALSE	canonical	1	1544	junction_3	221170.57929426327	NA	0	NA	TRUE	NA	NA	NA	C	coding	228	687	26	712	15.0	3	True	AATAAA	-21
PB.10602.3	chr7	+	2620	7	novel_not_in_catalog	EIF4H	novel	2679	7	NA	NA	-2	-2	any annotated donor/acceptor	TRUE	canonical	1	1544	junction_4	213076.82649196955	NA	2	NA	TRUE	NA	NA	NA	C	coding	111	336	56	391	15.0	0	True	AATAAA	-22
PB.10602.2	chr7	+	2565	7	full-splice_match	EIF4H	ENST00000265753.12	2679	7	111	3	0	2	multi-exon	FALSE	canonical	1	1544	junction_3	250786.2706833251	NA	0	NA	TRUE	NA	NA	NA	C	coding	248	747	29	775	15.0	0	True	AATAAA	-21
PB.10602.5	chr7	+	2233	4	novel_not_in_catalog	EIF4H	novel	2679	7	NA	NA	2	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	225381.39344675283	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	24	446	20.0	5	True	AATAAA	-18
PB.10602.4	chr7	+	2366	6	novel_in_catalog	EIF4H	novel	2679	7	NA	NA	2	-4	no_combination_of_known_junctions	FALSE	canonical	1	1544	junction_2	276006.8873534862	NA	0	NA	TRUE	NA	NA	NA	C	coding	111	336	247	582	25.0	5	True	AATAAA	-15
PB.6598.6	chr2	+	2055	12	novel_not_in_catalog	USP39	novel	648	5	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_6	249218.9162052359	NA	1	1	TRUE	NA	NA	NA	C	coding	295	888	32	919	15.0	-21	True	ATTAAA	-21
PB.10602.9	chr7	+	3490	2	incomplete-splice_match	EIF4H	ENST00000353999.6	2503	6	18963	-2	9497	2	5prime_fragment	FALSE	canonical	1	550212	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	110	333	2987	3319	15.0	6477	False	AATAAA	-21
PB.6705.7	chr2	-	2543	16	full-splice_match	SLC35F5	ENST00000245680.6	4412	16	210	1659	7	-98	multi-exon	FALSE	canonical	1	216280	junction_7	58636.056904945435	NA	1	1	TRUE	NA	NA	NA	C	coding	523	1572	205	1776	35.0	0	True	GATAAA	-23
PB.11521.2	chr9	+	6276	39	novel_in_catalog	UNC13B	novel	6426	40	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	1	413	junction_1	63233.42290877265	NA	0	NA	TRUE	NA	NA	NA	C	coding	1542	4629	343	4971	10.0	2	True	AATAAA	-17
PB.11160.2	chr8	-	2711	7	full-splice_match	ARMC1	ENST00000276569.7	3032	7	28	293	-2	-290	multi-exon	FALSE	canonical	1	110412	junction_4	101445.24742728627	NA	0	NA	TRUE	NA	NA	NA	C	coding	275	828	239	1066	75.0	-3	True	AATATA	-27
PB.6705.6	chr2	-	5664	15	novel_in_catalog	SLC35F5	novel	784	3	NA	NA	12	18	intron_retention	FALSE	canonical	1	234360	junction_8	51766.8038826968	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	273	1196	30.0	-40	False	ATTAAA	-39
PB.10014.2	chr6	+	2384	14	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	44	-2	no_combination_of_known_junctions	FALSE	canonical	1	17046	junction_1	332381.34585261083	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	393	1763	5.0	-13	True	AATAAA	-25
PB.10014.3	chr6	+	2539	12	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	-43	-2	intron_retention	TRUE	canonical	1	203623	junction_1	248311.00525139572	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	1076	1918	5.0	1	True	AATAAA	-25
PB.10014.1	chr6	+	2191	13	full-splice_match	SLC29A1	ENST00000427851.7	2318	13	131	-4	0	-1	multi-exon	FALSE	canonical	1	203623	junction_1	250425.9712030683	NA	0	NA	TRUE	NA	NA	NA	C	coding	481	1446	124	1569	5.0	0	True	AATAAA	-26
PB.10014.6	chr6	+	2217	14	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	1	56508	junction_2	329132.9053956433	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	230	1600	10.0	-21	True	AATAAA	-21
PB.10014.7	chr6	+	2105	13	full-splice_match	SLC29A1	ENST00000371755.8	2183	13	69	9	14	0	multi-exon	FALSE	canonical	1	164979	junction_1	258180.91556417482	NA	0	NA	TRUE	NA	NA	NA	C	coding	456	1371	121	1491	5.0	-22	True	AATAAA	-18
PB.10014.4	chr6	+	2384	12	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	-1916	-49	intron_retention	FALSE	canonical	1	6783	junction_1	294945.39461566735	NA	1	NA	TRUE	NA	NA	NA	C	coding	280	843	978	1820	15.0	-8118	False	AATATA	-14
PB.10014.5	chr6	+	2445	12	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	164979	junction_1	257151.36578159337	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	981	1823	5.0	-6165	False	AATAAA	-26
PB.6598.3	chr2	+	2082	14	novel_in_catalog	USP39	novel	648	5	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	1	36965	junction_3	284228.4949726021	NA	1	NA	TRUE	NA	NA	NA	C	coding	296	891	879	1769	10.0	-48	True	ATTAAA	-23
PB.10014.8	chr6	+	2500	12	novel_in_catalog	SLC29A1	novel	2318	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	164979	junction_1	268859.37886419304	NA	0	NA	TRUE	NA	NA	NA	C	coding	434	1305	8	1312	5.0	-35	True	AATAAA	-22
PB.10014.9	chr6	+	2339	15	novel_not_in_catalog	SLC29A1	novel	2318	13	NA	NA	1	1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	373116.4293218919	NA	4	1	TRUE	NA	NA	NA	C	coding	456	1371	354	1724	5.0	-35	True	AATAAA	-19
PB.6569.9	chr2	+	3064	13	novel_in_catalog	TTC31	novel	4025	7	NA	NA	2	-2	no_combination_of_known_junctions	FALSE	canonical	1	5622	junction_2	68010.13026069269	NA	0	NA	TRUE	NA	NA	NA	C	coding	375	1128	598	1725	30.0	-3	True	NA	NA
PB.10177.2	chr6	+	4036	6	full-splice_match	DSE	ENST00000452085.7	10586	6	-33	6583	16	0	multi-exon	FALSE	canonical	1	853	junction_1	43627.08486525315	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	228	3104	20.0	1	True	AATAAA	-14
PB.10177.1	chr6	+	4604	7	novel_in_catalog	DSE	novel	1130	4	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	1	7948	junction_2	46581.92610426638	NA	3	NA	TRUE	NA	NA	NA	C	coding	958	2877	789	3665	10.0	-51	True	AATAAA	-21
PB.10177.6	chr6	+	4175	6	full-splice_match	DSE	ENST00000644252.1	10617	6	-11	6453	-11	127	multi-exon	FALSE	canonical	1	88087	junction_4	29993.146807895966	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	240	3116	35.0	-11	False	ATTAAA	-23
PB.10177.7	chr6	+	3739	6	full-splice_match	DSE	ENST00000644252.1	10617	6	-10	6888	-10	-170	multi-exon	FALSE	canonical	1	88087	junction_4	29993.146807895966	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	239	3115	45.0	-10	False	ATTAAA	-23
PB.10177.4	chr6	+	3197	6	full-splice_match	DSE	ENST00000644252.1	10617	6	-42	7462	-42	-744	multi-exon	FALSE	canonical	1	88087	junction_4	29993.146807895966	NA	0	NA	TRUE	NA	NA	NA	C	coding	958	2877	271	3147	60.0	-42	False	TATAAA	-36
PB.10177.5	chr6	+	3311	6	full-splice_match	DSE	ENST00000644252.1	10617	6	-41	7347	-41	-629	multi-exon	FALSE	canonical	1	88087	junction_4	29993.146807895966	NA	3	NA	TRUE	NA	NA	NA	C	coding	958	2877	270	3146	60.0	-41	False	AAGAAA	-25
PB.9403.3	chr5	+	3732	1	novel_in_catalog	AP3S1	novel	1730	6	NA	NA	-6	-24460	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	243	732	99	830	65.0	-6	True	NA	NA
PB.10177.8	chr6	+	2843	2	incomplete-splice_match	DSE	ENST00000646710.1	3411	4	-47	36281	-7	586	3prime_fragment	FALSE	canonical	1	165568	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	139	420	236	655	85.0	-7	True	NA	NA
PB.10177.9	chr6	+	7025	6	full-splice_match	DSE	ENST00000644252.1	10617	6	-5	3597	-5	-1	multi-exon	FALSE	canonical	1	88087	junction_4	29993.146807895966	NA	4	NA	TRUE	NA	NA	NA	C	coding	958	2877	234	3110	15.0	-5	True	AATAAA	-16
PB.6705.9	chr2	-	3039	16	novel_in_catalog	SLC35F5	novel	784	3	NA	NA	88	-3	intron_retention	FALSE	canonical	1	22095	junction_15	96902.40582941628	NA	0	NA	TRUE	NA	NA	NA	C	coding	517	1554	624	2177	20.0	1	True	ATTAAA	-18
PB.9403.2	chr5	+	1202	5	novel_in_catalog	AP3S1	novel	1730	6	NA	NA	-11	-2	no_combination_of_known_junctions	FALSE	canonical	1	47431	junction_3	157295.87361144443	NA	0	NA	TRUE	NA	NA	NA	C	coding	169	510	104	613	35.0	-11	True	AATAAA	-20
PB.11313.12	chr8	-	2071	14	novel_not_in_catalog	TAF2	novel	5048	26	NA	NA	-5	17	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	67875.65373699802	NA	1	1	TRUE	NA	NA	NA	B	coding	429	1287	785	2071	45.0	1	True	AAGAAA	-45
PB.6705.8	chr2	-	6097	15	novel_in_catalog	SLC35F5	novel	784	3	NA	NA	0	-3	intron_retention	FALSE	canonical	1	22095	junction_14	96739.32973106815	NA	11	3	TRUE	NA	NA	NA	C	coding	301	906	745	1650	20.0	-7	True	ATTAAA	-18
PB.9403.1	chr5	+	1182	6	full-splice_match	AP3S1	ENST00000316788.11	1730	6	453	95	-12	-25	multi-exon	FALSE	canonical	1	58707	junction_1	184399.59057763658	NA	0	NA	TRUE	NA	NA	NA	C	coding	193	582	105	686	15.0	-12	True	AATAAA	-27
PB.10972.1	chr8	-	3067	7	novel_not_in_catalog	ALG1L13P	novel	521	2	NA	NA	-39365	1662	intron_retention	FALSE	canonical	1	850	junction_6	6285.92639685406	NA	0	NA	TRUE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	0.0	552	False	NA	NA
PB.6569.3	chr2	+	2976	13	novel_in_catalog	TTC31	novel	4025	7	NA	NA	-3	-2	no_combination_of_known_junctions	FALSE	canonical	1	8363	junction_8	64471.23594086789	NA	1	NA	TRUE	NA	NA	NA	C	coding	539	1620	18	1637	30.0	-8	True	NA	NA
PB.8973.1	chr4	-	4289	2	novel_not_in_catalog	ANKRD50	novel	8794	5	NA	NA	41068	13875	any annotated donor/acceptor	FALSE	canonical	1	91	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	743	2232	447	2678	30.0	NA	False	AATAAA	-18
PB.6923.15	chr2	-	1983	12	full-splice_match	HSPD1	ENST00000388968.7	2455	12	187	285	6	-280	multi-exon	FALSE	canonical	1	616249	junction_9	725493.8293174421	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	82	1803	30.0	5	True	AATATA	-19
PB.8601.7	chr3	+	6082	30	full-splice_match	OPA1	ENST00000361908.8	6397	30	34	281	0	4	multi-exon	FALSE	canonical	1	177548	junction_6	135020.58095786645	NA	1	NA	TRUE	NA	NA	NA	C	coding	997	2994	159	3152	30.0	12	True	ATTAAA	-20
PB.1117.3	chr1	-	4587	8	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-12	-1	no_combination_of_known_junctions	FALSE	canonical	1	23313	junction_3	75794.7723370989	NA	1	NA	TRUE	NA	NA	NA	C	coding	327	984	384	1367	15.0	-19	True	AATAAA	-14
PB.797.3	chr1	-	2531	13	novel_in_catalog	GBA	novel	2276	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	17232	junction_12	240919.25993156343	NA	0	NA	TRUE	NA	NA	NA	C	coding	536	1611	379	1989	20.0	13	False	NA	NA
PB.7839.13	chr22	-	1515	9	full-splice_match	POLDIP3	ENST00000252115.9	3441	9	-3	1929	-3	237	multi-exon	FALSE	canonical	1	410805	junction_8	115491.63010230438	NA	1	NA	TRUE	NA	NA	NA	C	coding	421	1266	109	1374	10.0	4933	False	GATAAA	-15
PB.6569.7	chr2	+	2882	13	novel_in_catalog	TTC31	novel	4025	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	3493	junction_11	68998.52346226129	NA	0	NA	TRUE	NA	NA	NA	C	coding	509	1530	15	1544	30.0	-5	True	NA	NA
PB.6923.16	chr2	-	3027	10	novel_in_catalog	HSPD1	novel	2455	12	NA	NA	-15	-217	intron_retention	FALSE	canonical	1	616249	junction_7	775386.8929112377	NA	1	NA	TRUE	NA	NA	NA	C	coding	357	1074	1711	2784	35.0	-29	False	AATAAA	-20
PB.1762.3	chr11	+	2809	3	incomplete-splice_match	TSSC4	ENST00000440813.1	851	4	-1339	-427	-2	0	intron_retention	FALSE	canonical	1	21819	junction_1	237170.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	1568	2557	15.0	9	True	AATAAA	-18
PB.1762.2	chr11	+	1471	3	full-splice_match	TSSC4	ENST00000333256.10	1686	3	216	-1	-4	1	multi-exon	FALSE	canonical	1	307225	junction_1	94467.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	228	1217	10.0	0	True	AATAAA	-20
PB.1762.1	chr11	+	2977	2	full-splice_match	TSSC4	ENST00000451491.2	1423	2	-1552	-2	-15	1	multi-exon	FALSE	canonical	1	496159	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	329	990	1734	2723	10.0	-11	True	AATAAA	-20
PB.7803.8	chr22	+	1504	13	full-splice_match	ADSL	ENST00000623063.3	4359	13	54	2801	-1	10	multi-exon	FALSE	canonical	1	483512	junction_1	297902.47430505906	NA	0	NA	TRUE	NA	NA	NA	C	coding	484	1455	6	1460	40.0	-3389	False	ATTAAA	-27
PB.6923.19	chr2	-	1217	9	incomplete-splice_match	HSPD1	ENST00000388968.7	2455	12	207	2480	0	-1087	3prime_fragment	FALSE	canonical	1	616249	junction_6	459916.54884086037	NA	1	NA	TRUE	NA	NA	NA	C	coding	385	1155	62	1216	65.0	-1	True	AAGAAA	-37
PB.11305.3	chr8	-	2749	7	novel_in_catalog	EIF3H	novel	3959	8	NA	NA	-5	6	intron_retention	FALSE	canonical	1	3027879	junction_6	810509.9193761535	NA	0	NA	TRUE	NA	NA	NA	C	coding	179	540	2031	2570	20.0	12	True	AATAAA	-23
PB.8973.6	chr4	-	6263	5	full-splice_match	ANKRD50	ENST00000504087.5	8794	5	30	2501	30	806	multi-exon	FALSE	canonical	1	93396	junction_4	11157.245728673362	NA	1	NA	TRUE	NA	NA	NA	C	coding	1429	4290	1009	5298	10.0	-1	True	AATAAA	-15
PB.6923.18	chr2	-	1480	10	incomplete-splice_match	HSPD1	ENST00000388968.7	2455	12	181	1733	0	-340	3prime_fragment	FALSE	canonical	1	616249	junction_7	622446.3350788257	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1392	88	1479	45.0	-1	True	AATGAA	-17
PB.10890.4	chr7	-	2208	1	incomplete-splice_match	KIAA1147	ENST00000536163.5	7296	9	43210	8	42672	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	NA	False	ATTAAA	-12
PB.10890.5	chr7	-	3652	3	novel_in_catalog	KIAA1147	novel	7296	9	NA	NA	36313	1074	intron_retention	FALSE	canonical	1	250385	junction_1	56392.0	NA	3	NA	TRUE	NA	NA	NA	B	coding	22	69	272	340	65.0	NA	False	NA	NA
PB.10890.2	chr7	-	7010	8	incomplete-splice_match	KIAA1147	ENST00000536163.5	7296	9	15511	2	14973	-2	5prime_fragment	FALSE	canonical	1	145556	junction_1	69373.71954383691	NA	1	NA	TRUE	NA	NA	NA	B	coding	345	1038	47	1084	20.0	NA	False	ATTAAA	-18
PB.10890.3	chr7	-	2861	1	incomplete-splice_match	KIAA1147	ENST00000536163.5	7296	9	42562	3	42024	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	NA	False	ATTAAA	-17
PB.1117.2	chr1	-	4784	9	novel_not_in_catalog	ANGEL2	novel	4649	9	NA	NA	-5	-1	any annotated donor/acceptor	FALSE	canonical	1	9642	junction_8	69364.3699278266	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	358	1926	15.0	-12	True	AATAAA	-14
PB.10134.1	chr6	+	5610	20	full-splice_match	CRYBG1	ENST00000369066.7	7553	20	681	1262	681	-1262	multi-exon	FALSE	canonical	1	144766	junction_1	53212.18317005037	NA	1	NA	TRUE	NA	NA	NA	C	coding	1406	4221	758	4978	40.0	-33	True	ATTAAA	-23
PB.6434.1	chr2	+	5554	23	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	-14	-36	any annotated donor/acceptor	FALSE	canonical	1	1901	junction_9	115550.90270562454	NA	2	NA	TRUE	NA	NA	NA	C	coding	990	2973	277	3249	80.0	-17	True	NA	NA
PB.3024.1	chr12	+	4452	11	novel_not_in_catalog	EP400	novel	12317	53	NA	NA	-9025	2	intron_retention	FALSE	canonical	1	4502	junction_4	70426.82502257219	NA	1	NA	TRUE	NA	NA	NA	B	coding	533	1602	65	1666	10.0	NA	False	AATAAA	-16
PB.6434.2	chr2	+	2359	18	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	-12	-14427	any annotated donor/acceptor	FALSE	canonical	1	1866	junction_17	111555.34505899675	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	275	2254	45.0	-15	True	AATAAA	-13
PB.11662.8	chr9	+	1775	2	incomplete-splice_match	MFSD14B	ENST00000375344.7	3420	12	83896	125	11593	-2	5prime_fragment	FALSE	canonical	1	517342	junction_1	0.0	NA	2	1	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	5.0	-1161	False	AATAAA	-17
PB.11218.3	chr8	+	3594	23	novel_not_in_catalog	WWP1	novel	4686	25	NA	NA	-122	7	any annotated donor/acceptor	FALSE	canonical	1	7994	junction_13	80373.95788984201	NA	3	NA	TRUE	NA	NA	NA	C	coding	382	1149	762	1910	25.0	-213	False	AATAAA	-19
PB.4586.21	chr16	+	2816	14	full-splice_match	USP10	ENST00000219473.11	3009	14	28	165	2	110	multi-exon	FALSE	canonical	1	53900	junction_12	171164.41693945866	NA	0	NA	TRUE	NA	NA	NA	C	coding	798	2397	86	2482	40.0	6	True	AATAAA	-13
PB.4586.20	chr16	+	2763	12	novel_in_catalog	USP10	novel	3009	14	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	1	1419	junction_4	136983.19639248028	NA	0	NA	TRUE	NA	NA	NA	C	coding	400	1203	88	1290	80.0	4	True	GATAAA	-39
PB.12050.1	chrX	+	1825	1	full-splice_match	LINC01560	ENST00000624822.1	1238	1	-587	0	-587	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	A	coding	140	423	2	424	85.0	130	False	NA	NA
PB.8199.1	chr3	+	2705	6	full-splice_match	RPP14	ENST00000295959.9	3121	6	-30	446	-2	123	multi-exon	FALSE	canonical	1	73130	junction_1	96680.04606204944	NA	2	NA	TRUE	NA	NA	NA	C	coding	168	507	687	1193	75.0	-17	True	AATACA	-11
PB.6434.4	chr2	+	3746	23	full-splice_match	EML4	ENST00000318522.9	5549	23	-3	1806	-3	-2	multi-exon	FALSE	canonical	1	180220	junction_6	85535.70398430651	NA	0	NA	TRUE	NA	NA	NA	C	coding	981	2946	266	3211	20.0	-6	True	AAGAAA	-22
PB.11662.2	chr9	+	2963	11	novel_in_catalog	MFSD14B	novel	3420	12	NA	NA	236	0	intron_retention	FALSE	canonical	1	21128	junction_3	171782.13879041676	NA	0	NA	TRUE	NA	NA	NA	C	coding	376	1131	34	1164	5.0	218	False	AATAAA	-19
PB.9630.4	chr5	+	3307	10	full-splice_match	SIMC1	ENST00000429602.6	2694	10	-72	-541	-34	1	multi-exon	FALSE	canonical	1	38811	junction_1	35648.15887407246	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	91	2766	40.0	-24	True	AATAAA	-18
PB.9630.3	chr5	+	2040	9	full-splice_match	SIMC1	ENST00000341199.10	2056	9	24	-8	9	2	multi-exon	FALSE	canonical	1	1886	junction_1	46777.29067597198	NA	2	NA	TRUE	NA	NA	NA	C	coding	457	1374	119	1492	20.0	-52	False	AATAAA	-25
PB.9630.2	chr5	+	3471	11	novel_in_catalog	SIMC1	novel	2056	9	NA	NA	1	-1	intron_retention	FALSE	canonical	1	403	junction_1	50863.65645930304	NA	1	NA	TRUE	NA	NA	NA	C	coding	783	2352	581	2932	40.0	-60	False	AATAAA	-16
PB.9630.1	chr5	+	3059	10	full-splice_match	SIMC1	ENST00000429602.6	2694	10	-115	-250	-6	250	multi-exon	FALSE	canonical	1	38811	junction_1	35648.15887407246	NA	1	NA	TRUE	NA	NA	NA	C	coding	891	2676	134	2809	35.0	-67	False	AATAAA	-22
PB.6434.5	chr2	+	5376	22	full-splice_match	EML4	ENST00000402711.6	3568	22	-6	-1802	-3	-2	multi-exon	FALSE	canonical	1	25432	junction_3	114606.73428500579	NA	0	NA	TRUE	NA	NA	NA	C	coding	923	2772	266	3037	20.0	-6	True	AATAAA	-25
PB.5328.1	chr17	-	1226	5	full-splice_match	MCRIP1	ENST00000455127.6	1209	5	-23	6	0	0	multi-exon	FALSE	canonical	1	352194	junction_4	383957.0814420539	NA	0	NA	TRUE	NA	NA	NA	A	coding	97	294	103	396	0.0	-1	True	AATAAA	-16
PB.8670.1	chr4	+	1496	1	genic	NOP14-AS1	novel	NA	NA	NA	NA	-17	-4064	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	20.0	-34	True	NA	NA
PB.8670.2	chr4	+	3108	1	genic	NOP14-AS1	novel	NA	NA	NA	NA	-13	-2448	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	25.0	-30	True	AGTAAA	-16
PB.8670.3	chr4	+	2545	5	novel_in_catalog	NOP14-AS1	novel	1999	5	NA	NA	16	5	combination_of_known_junctions	FALSE	canonical	1	20993	junction_1	9601.664969550853	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	40.0	-1	True	AATAAA	-20
PB.8670.4	chr4	+	2524	5	novel_not_in_catalog	NOP14-AS1	novel	1999	5	NA	NA	16	2	any annotated donor/acceptor	FALSE	canonical	1	9594	junction_2	9592.733222992287	NA	1	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	35.0	-1	True	AATAAA	-17
PB.5928.5	chr19	+	3867	18	novel_in_catalog	MAG	novel	2390	11	NA	NA	52	33563	no_combination_of_known_junctions	FALSE	canonical	1	4265	junction_3	208880.2515371462	NA	0	NA	TRUE	NA	NA	NA	B	coding	847	2544	654	3197	20.0	0	True	AATAAA	-33
PB.6434.7	chr2	+	5637	24	novel_not_in_catalog	EML4	novel	5549	23	NA	NA	0	-3	any annotated donor/acceptor	FALSE	canonical	1	1957	junction_1	132298.87570697954	NA	2	NA	TRUE	NA	NA	NA	C	coding	902	2709	591	3299	20.0	0	True	AATAAA	-24
PB.11696.14	chr9	+	4268	25	full-splice_match	SMC2	ENST00000374787.7	4266	25	1	-3	1	2	multi-exon	FALSE	canonical	1	48498	junction_1	68856.61044276481	NA	1	NA	TRUE	NA	NA	NA	C	coding	1197	3594	336	3929	25.0	-62	True	ATTAAA	-19
PB.5678.19	chr19	+	1791	10	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	7	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	791400.2035034698	NA	0	NA	TRUE	NA	NA	NA	B	coding	503	1512	25	1536	20.0	-9675	False	AATAAA	-12
PB.6434.9	chr2	+	7100	22	novel_in_catalog	EML4	novel	5549	23	NA	NA	3	-8	intron_retention	FALSE	canonical	1	180220	junction_6	86745.31662084583	NA	3	NA	TRUE	NA	NA	NA	C	coding	670	2013	2755	4767	20.0	3	True	AATAAA	-19
PB.5678.15	chr19	+	2242	14	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-2	0	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	1043827.6193422533	NA	1	1	TRUE	NA	NA	NA	B	coding	538	1617	370	1986	20.0	13	True	AATAAA	-13
PB.5678.14	chr19	+	2337	13	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-4	0	intron_retention	FALSE	canonical	1	10	junction_3	1010422.184708039	NA	1	1	TRUE	NA	NA	NA	B	coding	569	1710	372	2081	20.0	11	True	AATAAA	-13
PB.5678.13	chr19	+	2343	16	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-4	0	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	773760.4849996067	NA	1	1	TRUE	NA	NA	NA	B	coding	571	1716	372	2087	20.0	11	True	AATAAA	-13
PB.5678.12	chr19	+	2243	14	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	0	-2	any annotated donor/acceptor	FALSE	canonical	0	0	junction_2	917397.9614472846	NA	2	1	TRUE	NA	NA	NA	B	coding	549	1650	340	1989	20.0	2	True	AATAAA	-11
PB.5678.11	chr19	+	2190	13	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-1	-1	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	1081278.2731842848	NA	1	1	TRUE	NA	NA	NA	B	coding	517	1554	382	1935	20.0	1	True	AATAAA	-12
PB.5678.10	chr19	+	2194	16	novel_not_in_catalog	HNRNPM	novel	2568	17	NA	NA	-2	4	any annotated donor/acceptor	FALSE	canonical	1	10	junction_3	773760.4849996067	NA	1	1	TRUE	NA	NA	NA	B	coding	571	1716	383	2098	35.0	0	True	TATAAA	-8
PB.5928.8	chr19	+	2020	5	incomplete-splice_match	MAG	ENST00000361922.8	2426	12	17773	-1008	101	1008	5prime_fragment	FALSE	canonical	1	5520	junction_4	85591.21928496813	NA	1	NA	TRUE	NA	NA	NA	B	coding	73	222	264	485	25.0	-9505	False	TATAAA	-15
PB.1863.1	chr11	+	4131	11	novel_not_in_catalog	ANO3	novel	3257	27	NA	NA	65899	11	any annotated donor/acceptor	TRUE	canonical	1	248	junction_1	4451.261556008588	NA	1	NA	TRUE	NA	NA	NA	A	coding	341	1026	251	1276	35.0	NA	False	AATAAA	-29
PB.6802.2	chr2	-	6699	34	novel_in_catalog	LY75-CD302	novel	5650	39	NA	NA	27	-31514	no_combination_of_known_junctions	FALSE	canonical	1	3669	junction_3	42388.794155873096	NA	13	1	TRUE	NA	NA	NA	B	coding	1672	5019	2	5020	45.0	72	True	AATAAA	-20
PB.5614.3	chr19	-	2324	17	full-splice_match	PIP5K1C	ENST00000539785.5	2289	17	-32	-3	-18	3	multi-exon	FALSE	canonical	1	116872	junction_1	66508.23825556782	NA	2	NA	TRUE	NA	NA	NA	C	coding	640	1923	108	2030	75.0	-30	True	NA	NA
PB.617.8	chr1	+	4505	10	novel_not_in_catalog	CAPZA1	novel	3020	10	NA	NA	0	-7	any annotated donor/acceptor	FALSE	canonical	1	5295	junction_3	419784.8924798521	NA	1	NA	TRUE	NA	NA	NA	C	coding	228	687	2339	3025	25.0	0	True	AATATA	-14
PB.5754.10	chr19	-	4549	26	novel_in_catalog	TNPO2	novel	5122	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	134056	junction_25	180657.83984715416	NA	18	1	TRUE	NA	NA	NA	C	coding	887	2664	295	2958	80.0	-1	True	NA	NA
PB.10309.19	chr6	-	2130	7	incomplete-splice_match	EZR	ENST00000337147.11	3068	13	-6	9472	-6	8321	3prime_fragment	FALSE	canonical	1	1797375	junction_6	310653.48876186257	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	141	1016	60.0	1	True	NA	NA
PB.10309.18	chr6	-	2291	7	incomplete-splice_match	EZR	ENST00000337147.11	3068	13	-7	9312	-7	8481	3prime_fragment	FALSE	canonical	1	1797375	junction_6	310653.48876186257	NA	0	NA	TRUE	NA	NA	NA	C	coding	291	876	142	1017	90.0	0	True	NA	NA
PB.10309.17	chr6	-	1102	8	incomplete-splice_match	EZR	ENST00000337147.11	3068	13	-8	5502	-8	-5495	3prime_fragment	FALSE	canonical	1	1797375	junction_7	293868.8818551844	NA	0	NA	TRUE	NA	NA	NA	C	coding	320	960	143	1102	20.0	-1	True	NA	NA
PB.10309.16	chr6	-	2249	14	full-splice_match	EZR	ENST00000367075.3	3096	14	42	805	-21	-805	multi-exon	FALSE	canonical	1	1238500	junction_2	546726.8139811476	NA	1	NA	TRUE	NA	NA	NA	C	coding	586	1761	128	1888	15.0	-7	True	ATTAAA	-19
PB.617.6	chr1	+	2318	10	novel_not_in_catalog	CAPZA1	novel	3020	10	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	canonical	0	0	junction_5	405825.5887168255	NA	5	1	TRUE	NA	NA	NA	C	coding	128	387	28	414	25.0	-14	True	AATATA	-14
PB.10309.14	chr6	-	2598	14	full-splice_match	EZR	ENST00000367075.3	3096	14	48	450	-15	-450	multi-exon	FALSE	canonical	1	1238500	junction_2	546726.8139811476	NA	3	NA	TRUE	NA	NA	NA	C	coding	586	1761	122	1882	40.0	-1	True	AATACA	-20
PB.10309.13	chr6	-	2789	15	novel_not_in_catalog	EZR	novel	3068	13	NA	NA	-17	-376	any annotated donor/acceptor	FALSE	canonical	1	2566	junction_6	924355.1960146659	NA	16	1	TRUE	NA	NA	NA	C	coding	302	909	1091	1999	30.0	-3	True	AATAAA	-25
PB.4616.1	chr16	-	1944	1	novel_in_catalog	ANKRD11	novel	9312	13	NA	NA	77	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	5.0	-3910	False	AATAAA	-25
PB.10134.2	chr6	+	6552	20	full-splice_match	CRYBG1	ENST00000369066.7	7553	20	997	4	997	-4	multi-exon	FALSE	canonical	1	144766	junction_1	53212.18317005037	NA	1	NA	TRUE	NA	NA	NA	C	coding	1406	4221	442	4662	35.0	-8542	False	AATAAA	-26
PB.10309.10	chr6	-	2979	13	novel_not_in_catalog	EZR	novel	3068	13	NA	NA	-25	-1	any annotated donor/acceptor	FALSE	canonical	0	0	junction_12	797642.7445728367	NA	5	1	TRUE	NA	NA	NA	C	coding	575	1728	87	1814	25.0	-11	True	AATAAA	-15
PB.12026.1	chrX	+	1765	8	full-splice_match	TSPAN7	ENST00000378482.6	1909	8	147	-3	-25	3	multi-exon	FALSE	canonical	1	721434	junction_2	109423.3589954025	NA	0	NA	TRUE	NA	NA	NA	A	coding	249	750	31	780	5.0	8	True	AATAAA	-16
PB.2873.4	chr12	+	3227	3	full-splice_match	FICD	ENST00000552695.5	3347	3	118	2	3	-2	multi-exon	FALSE	canonical	1	54801	junction_1	1070.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	453	1362	133	1494	25.0	-5	True	AATAAA	-17
PB.2873.3	chr12	+	4372	2	full-splice_match	FICD	ENST00000552758.1	603	2	-19	-3750	-19	-5	multi-exon	FALSE	canonical	1	54801	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	1422	2642	25.0	-27	True	AATAAA	-14
PB.2873.2	chr12	+	2783	2	full-splice_match	FICD	ENST00000552758.1	603	2	-32	-2148	-32	73	multi-exon	FALSE	canonical	1	54801	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	406	1221	1435	2655	85.0	-40	True	NA	NA
PB.2873.1	chr12	+	1564	3	full-splice_match	FICD	ENST00000552695.5	3347	3	88	1695	-27	-15	multi-exon	FALSE	canonical	1	54801	junction_1	1070.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1362	163	1524	80.0	-35	True	NA	NA
PB.11696.16	chr9	+	2470	17	novel_in_catalog	SMC2	novel	5992	25	NA	NA	12	-14701	no_combination_of_known_junctions	FALSE	canonical	1	12552	junction_2	106482.96235306555	NA	3	NA	TRUE	NA	NA	NA	C	coding	715	2145	325	2469	75.0	-51	True	ACTAAA	-8
PB.8068.5	chr3	+	3505	20	novel_not_in_catalog	SACM1L	novel	571	6	NA	NA	8	0	any annotated donor/acceptor	FALSE	canonical	1	2043	junction_4	108079.8783969741	NA	2	NA	TRUE	NA	NA	NA	C	coding	554	1665	102	1766	25.0	-31	True	AATAAA	-18
PB.4360.2	chr16	-	1651	9	novel_in_catalog	MAPK3	novel	1861	9	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	7325	junction_8	380400.690306616	NA	0	NA	TRUE	NA	NA	NA	C	coding	265	798	221	1018	5.0	-7	True	TATAAA	-21
PB.1117.6	chr1	-	4710	9	novel_in_catalog	ANGEL2	novel	4649	9	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	65115	junction_8	54559.420971542575	NA	0	NA	TRUE	NA	NA	NA	C	coding	490	1473	381	1853	15.0	-16	True	AATAAA	-13
PB.4360.1	chr16	-	1783	9	full-splice_match	MAPK3	ENST00000263025.8	1861	9	77	1	-8	0	multi-exon	FALSE	canonical	1	615709	junction_1	215418.68645003706	NA	0	NA	TRUE	NA	NA	NA	C	coding	379	1140	9	1148	5.0	1	True	TATAAA	-23
PB.686.3	chr1	-	2546	8	full-splice_match	TXNIP	ENST00000582401.5	2926	8	371	9	371	-9	multi-exon	TRUE	canonical	0	0	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	335	1008	132	1139	55.0	1933	False	AATAAA	-14
PB.5312.1	chr17	-	1440	3	novel_not_in_catalog	AATK	novel	5257	14	NA	NA	1761	-4	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	68094.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	111	336	11	346	50.0	9139	False	AATGAA	-4
PB.5634.1	chr19	+	3895	17	full-splice_match	UHRF1	ENST00000624301.3	3898	17	3	0	3	0	multi-exon	TRUE	canonical	1	90	junction_14	151784.64821540748	NA	1	NA	TRUE	NA	NA	NA	C	coding	793	2382	166	2547	15.0	0	True	AATAAA	-15
PB.8313.2	chr3	-	3702	8	novel_in_catalog	IGSF11	novel	3525	8	NA	NA	1	0	no_combination_of_known_junctions	FALSE	canonical	1	1574	junction_7	12249.009485985189	NA	9	1	TRUE	NA	NA	NA	C	coding	481	1446	373	1818	50.0	-7	True	AATAAA	-12
PB.3962.9	chr15	-	1802	13	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-7	-59140	no_combination_of_known_junctions	FALSE	canonical	1	4408	junction_12	430754.34843855293	NA	1	1	TRUE	NA	NA	NA	B	coding	337	1014	579	1592	60.0	-4	True	AATAAA	-19
PB.3962.8	chr15	-	1914	15	novel_not_in_catalog	AC009690.1	novel	4374	16	NA	NA	-5	-59140	any annotated donor/acceptor	FALSE	canonical	1	2649	junction_3	381456.90115781553	NA	1	1	TRUE	NA	NA	NA	B	coding	473	1422	15	1436	60.0	-2	True	AATAAA	-19
PB.11204.1	chr8	+	4925	6	full-splice_match	ZBTB10	ENST00000455036.7	5458	6	538	-5	444	5	multi-exon	FALSE	canonical	1	140714	junction_3	19177.097261055962	NA	1	NA	TRUE	NA	NA	NA	C	coding	871	2616	61	2676	10.0	296	False	AGTAAA	-24
PB.3962.3	chr15	-	2525	13	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-32	-59140	intron_retention	FALSE	canonical	1	757827	junction_8	160672.01712000047	NA	0	NA	TRUE	NA	NA	NA	B	coding	474	1425	42	1466	60.0	-29	True	AATAAA	-19
PB.3962.2	chr15	-	2961	13	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-38	-58710	intron_retention	FALSE	canonical	1	757827	junction_8	160672.01712000047	NA	0	NA	TRUE	NA	NA	NA	B	coding	474	1425	48	1472	10.0	-35	True	ATTAAA	-17
PB.3962.1	chr15	-	2267	14	full-splice_match	HEXA	ENST00000268097.9	5252	14	470	2515	-3	423	multi-exon	FALSE	canonical	1	757827	junction_9	177306.27941496132	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	35	1624	10.0	-22	True	ATTAAA	-20
PB.2262.14	chr11	+	4650	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	598	1103	71	-179	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	3	NA	TRUE	NA	NA	NA	C	coding	780	2343	19	2361	90.0	-6	True	NA	NA
PB.3962.7	chr15	-	2080	12	novel_not_in_catalog	AC009690.1	novel	4374	16	NA	NA	-7	-59140	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_3	394885.1997342272	NA	2	NA	TRUE	NA	NA	NA	B	coding	376	1131	17	1147	60.0	-4	True	AATAAA	-19
PB.3962.6	chr15	-	1819	14	full-splice_match	HEXA	ENST00000268097.9	5252	14	484	2949	1	-11	multi-exon	FALSE	canonical	1	757827	junction_9	177306.27941496132	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	21	1610	60.0	-8	True	AATAAA	-18
PB.3962.5	chr15	-	2395	14	novel_in_catalog	AC009690.1	novel	4374	16	NA	NA	-28	-59140	no_combination_of_known_junctions	FALSE	canonical	1	39443	junction_2	304549.6933334769	NA	1	NA	TRUE	NA	NA	NA	B	coding	474	1425	38	1462	60.0	-25	True	AATAAA	-19
PB.2262.10	chr11	+	4876	19	full-splice_match	CUL5	ENST00000393094.6	6351	19	535	940	8	-16	multi-exon	FALSE	canonical	1	156600	junction_3	39937.92270902092	NA	2	NA	TRUE	NA	NA	NA	C	coding	780	2343	82	2424	85.0	-69	False	AAGAAA	-18
PB.8068.4	chr3	+	3469	19	novel_in_catalog	SACM1L	novel	571	6	NA	NA	3	0	no_combination_of_known_junctions	FALSE	canonical	1	10379	junction_13	110666.2987386231	NA	1	NA	TRUE	NA	NA	NA	C	coding	368	1107	107	1213	25.0	-36	True	AATAAA	-17
PB.10522.1	chr7	-	4768	6	full-splice_match	NUDCD3	ENST00000355451.7	8256	6	241	3247	-33	1223	multi-exon	TRUE	canonical	1	413050	junction_4	89312.17486457263	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	40	1125	30.0	18	True	ACTAAA	-21
PB.10522.3	chr7	-	3076	5	novel_not_in_catalog	NUDCD3	novel	8256	6	NA	NA	11495	1	any annotated donor/acceptor	FALSE	canonical	1	9867	junction_4	232148.12972862824	NA	0	NA	TRUE	NA	NA	NA	C	coding	205	618	38	655	10.0	-9	True	AATAAA	-16
PB.10522.4	chr7	-	3525	6	full-splice_match	NUDCD3	ENST00000355451.7	8256	6	260	4471	-14	-1	multi-exon	FALSE	canonical	1	413050	junction_4	89312.17486457263	NA	0	NA	TRUE	NA	NA	NA	C	coding	361	1086	21	1106	10.0	37	True	AATAAA	-14
PB.2611.3	chr12	-	4367	5	full-splice_match	CSRNP2	ENST00000228515.5	4471	5	97	7	97	-7	multi-exon	FALSE	canonical	1	35921	junction_4	57862.07321024282	NA	0	NA	TRUE	NA	NA	NA	C	coding	543	1632	202	1833	40.0	142	False	ATTAAA	-10
PB.8266.8	chr3	-	4030	13	novel_not_in_catalog	TOMM70	novel	4409	12	NA	NA	297	-34	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	205392.05250481065	NA	1	NA	TRUE	NA	NA	NA	C	coding	608	1827	153	1979	20.0	-20	True	AATAAA	-11
PB.3807.15	chr15	+	1900	7	full-splice_match	SNAP23	ENST00000349777.5	2480	7	343	237	-2	-237	multi-exon	FALSE	canonical	1	27937	junction_5	294807.9746569508	NA	1	NA	TRUE	NA	NA	NA	C	coding	158	477	80	556	35.0	-29	True	AAAAAG	-33
PB.3807.14	chr15	+	2461	7	novel_in_catalog	SNAP23	novel	814	4	NA	NA	-2	-237	intron_retention	FALSE	canonical	1	675986	junction_4	121334.31533634204	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	611	1117	35.0	-29	True	AAAAAG	-33
PB.5354.10	chr17	+	2742	26	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	-801	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	193379.5256898268	NA	2	1	TRUE	NA	NA	NA	B	coding	468	1407	1100	2506	20.0	-2	True	TATAAA	-11
PB.5354.11	chr17	+	2599	26	novel_not_in_catalog	TBCD	novel	7168	39	NA	NA	36	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_9	194884.31098094684	NA	2	1	TRUE	NA	NA	NA	B	coding	468	1407	957	2363	20.0	-3538	False	TATAAA	-11
PB.3807.11	chr15	+	2387	9	novel_in_catalog	SNAP23	novel	814	4	NA	NA	3	-6	intron_retention	FALSE	canonical	1	11603	junction_6	367326.266135243	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	-31	True	ATTAAA	-9
PB.3807.10	chr15	+	2289	8	novel_in_catalog	SNAP23	novel	814	4	NA	NA	0	-237	intron_retention	FALSE	canonical	1	11917	junction_3	306157.6560366191	NA	0	NA	TRUE	NA	NA	NA	C	coding	168	507	439	945	35.0	-34	True	AAAAAG	-33
PB.3807.13	chr15	+	2517	8	novel_in_catalog	SNAP23	novel	814	4	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	11917	junction_3	306157.6560366191	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	434	940	25.0	-29	True	ATTAAA	-11
PB.3807.12	chr15	+	2556	8	novel_in_catalog	SNAP23	novel	814	4	NA	NA	-2	-237	intron_retention	FALSE	canonical	1	11603	junction_5	392289.88434351055	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-29	True	AAAAAG	-33
PB.3807.19	chr15	+	2760	8	novel_in_catalog	SNAP23	novel	814	4	NA	NA	0	-4	intron_retention	FALSE	canonical	1	11603	junction_5	392289.88434351055	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	ATTAAA	-11
PB.3807.18	chr15	+	2157	9	novel_not_in_catalog	SNAP23	novel	814	4	NA	NA	-9	-237	intron_retention	FALSE	canonical	1	2298	junction_1	366792.4494143239	NA	0	NA	TRUE	NA	NA	NA	C	coding	211	636	178	813	35.0	-9	True	AAAAAG	-33
PB.8696.1	chr4	-	2841	18	full-splice_match	ACOX3	ENST00000503233.5	2253	18	19	-607	-6	-72	multi-exon	FALSE	canonical	1	83401	junction_17	23256.210164258326	NA	2	NA	TRUE	NA	NA	NA	C	coding	700	2103	132	2234	25.0	-20	True	AAAAAG	-12
PB.9124.9	chr5	-	3413	11	novel_not_in_catalog	LPCAT1	novel	5610	17	NA	NA	5793	0	any annotated donor/acceptor	FALSE	canonical	1	1566	junction_10	214278.91090354644	NA	2	NA	TRUE	NA	NA	NA	C	coding	331	996	196	1191	15.0	6253	False	AGTAAA	-21
PB.2863.3	chr12	-	2658	3	novel_not_in_catalog	CKAP4	novel	3093	2	NA	NA	0	-147	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	472959.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	654	1658	85.0	3	True	NA	NA
PB.10810.2	chr7	-	3783	24	full-splice_match	AASS	ENST00000417368.6	3163	24	-24	-596	-24	1	multi-exon	FALSE	canonical	1	88204	junction_11	56475.674564640576	NA	0	NA	TRUE	NA	NA	NA	C	coding	926	2781	160	2940	85.0	3	True	NA	NA
PB.2863.5	chr12	-	2420	2	full-splice_match	CKAP4	ENST00000378026.4	3093	2	525	148	525	-148	multi-exon	FALSE	canonical	1	945918	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	417	1421	85.0	1601	False	NA	NA
PB.2863.6	chr12	-	2882	3	novel_not_in_catalog	CKAP4	novel	3093	2	NA	NA	-85	-148	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	472959.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	879	1883	85.0	991	False	NA	NA
PB.2863.7	chr12	-	2872	3	novel_not_in_catalog	CKAP4	novel	3093	2	NA	NA	-3	-148	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	472959.0	NA	3	1	TRUE	NA	NA	NA	C	coding	446	1341	141	1481	85.0	0	True	NA	NA
PB.2863.8	chr12	-	2763	3	novel_not_in_catalog	CKAP4	novel	3093	2	NA	NA	16	-148	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_2	472959.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	334	1005	760	1764	85.0	19	True	NA	NA
PB.2863.9	chr12	-	2716	3	novel_not_in_catalog	CKAP4	novel	3093	2	NA	NA	-14	-148	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	472959.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	521	1566	152	1717	85.0	-11	True	NA	NA
PB.9124.1	chr5	-	3961	14	full-splice_match	LPCAT1	ENST00000283415.3	3966	14	-2	7	-2	-1	multi-exon	FALSE	canonical	1	315996	junction_13	137661.63025786975	NA	41	2	TRUE	NA	NA	NA	C	coding	534	1605	136	1740	15.0	-21	True	AGTAAA	-20
PB.9124.7	chr5	-	6084	13	novel_in_catalog	LPCAT1	novel	5610	17	NA	NA	-5	0	intron_retention	FALSE	canonical	1	315996	junction_12	138324.47932819652	NA	1	NA	TRUE	NA	NA	NA	C	coding	307	924	2939	3862	15.0	-9	True	AGTAAA	-21
PB.9124.6	chr5	-	3441	11	novel_in_catalog	LPCAT1	novel	5610	17	NA	NA	67	0	no_combination_of_known_junctions	FALSE	canonical	1	930	junction_6	212779.97455975504	NA	1	NA	TRUE	NA	NA	NA	C	coding	270	813	407	1219	15.0	27	True	AGTAAA	-21
PB.9124.4	chr5	-	3764	14	novel_not_in_catalog	LPCAT1	novel	5610	17	NA	NA	-7274	0	any annotated donor/acceptor	FALSE	canonical	1	1036	junction_13	199576.18311450948	NA	1	NA	TRUE	NA	NA	NA	C	coding	493	1482	61	1542	15.0	-3	True	AGTAAA	-21
PB.9420.14	chr5	+	3090	5	full-splice_match	PHAX	ENST00000297540.4	4288	5	681	517	24	-517	multi-exon	FALSE	canonical	1	334636	junction_4	41985.22598486282	NA	5	NA	TRUE	NA	NA	NA	C	coding	394	1185	15	1199	90.0	2	True	NA	NA
PB.8793.9	chr4	-	3502	11	full-splice_match	PPAT	ENST00000264220.6	3682	11	4	176	4	-173	multi-exon	FALSE	canonical	1	24872	junction_1	59558.05574471014	NA	2	NA	TRUE	NA	NA	NA	C	coding	517	1554	135	1688	35.0	0	True	NA	NA
PB.445.3	chr1	+	3009	9	full-splice_match	USP1	ENST00000339950.4	3996	9	426	561	426	-559	multi-exon	FALSE	canonical	1	271579	junction_1	104683.06610722374	NA	2	NA	TRUE	NA	NA	NA	C	coding	785	2358	390	2747	30.0	31	True	ATTAAA	-16
PB.445.2	chr1	+	3333	9	full-splice_match	USP1	ENST00000339950.4	3996	9	599	64	599	-62	multi-exon	FALSE	canonical	1	271579	junction_1	104683.06610722374	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	217	2574	30.0	-90	False	AATAAA	-23
PB.445.1	chr1	+	3449	9	full-splice_match	USP1	ENST00000371146.5	3507	9	-5	63	1	-63	multi-exon	FALSE	canonical	1	11354	junction_1	183336.28066939587	NA	0	NA	TRUE	NA	NA	NA	C	coding	785	2358	334	2691	35.0	-1045	False	AATAAA	-22
PB.8255.5	chr3	-	7311	2	full-splice_match	CLDND1	ENST00000506927.1	520	2	-5648	-1143	-8	-24	multi-exon	FALSE	canonical	1	1367725	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	117	354	1570	1923	75.0	7022	False	NA	NA
PB.445.5	chr1	+	2415	9	full-splice_match	USP1	ENST00000339950.4	3996	9	374	1207	374	-1205	multi-exon	FALSE	canonical	1	271579	junction_1	104683.06610722374	NA	2	NA	TRUE	NA	NA	NA	C	coding	658	1974	442	2415	65.0	-21	True	AGTAAA	-7
PB.445.4	chr1	+	1133	6	incomplete-splice_match	USP1	ENST00000339950.4	3996	9	335	6971	335	1513	3prime_fragment	FALSE	canonical	1	271579	junction_1	108429.52029664247	NA	1	NA	TRUE	NA	NA	NA	C	coding	217	651	481	1131	80.0	-6	True	AAGAAA	-14
PB.2840.1	chr12	+	2419	7	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	1026	junction_1	46228.21389854901	NA	0	NA	TRUE	NA	NA	NA	C	coding	221	666	194	859	25.0	-4	True	AATAAA	-22
PB.2840.3	chr12	+	2576	8	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	28716	junction_6	35370.1780392835	NA	0	NA	TRUE	NA	NA	NA	C	coding	302	909	108	1016	25.0	0	True	AATAAA	-22
PB.2840.2	chr12	+	2329	6	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	14933	junction_4	36431.28095140219	NA	0	NA	TRUE	NA	NA	NA	C	coding	240	723	112	834	25.0	-4	True	AATAAA	-21
PB.2840.5	chr12	+	2496	7	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	21892	junction_6	34005.227116168804	NA	0	NA	TRUE	NA	NA	NA	C	coding	297	894	107	1000	25.0	1	True	AATAAA	-22
PB.2840.4	chr12	+	2816	9	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	2298	junction_7	35946.22461660612	NA	0	NA	TRUE	NA	NA	NA	C	coding	493	1482	107	1588	25.0	1	True	AATAAA	-22
PB.2840.7	chr12	+	2833	10	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	2	-5	intron_retention	FALSE	canonical	1	13706	junction_2	32596.77800975557	NA	3	NA	TRUE	NA	NA	NA	C	coding	501	1506	104	1609	30.0	4	True	AATAAA	-18
PB.2840.6	chr12	+	2937	10	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	32283	junction_9	27553.826239643095	NA	1	NA	TRUE	NA	NA	NA	C	coding	423	1272	106	1377	25.0	2	True	AATAAA	-22
PB.2840.9	chr12	+	2722	9	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1901	junction_2	37069.15596367652	NA	2	NA	TRUE	NA	NA	NA	C	coding	465	1398	97	1494	25.0	11	True	AATAAA	-22
PB.2840.8	chr12	+	2709	9	novel_in_catalog	PARPBP	novel	2452	12	NA	NA	-2	6	intron_retention	FALSE	canonical	1	28716	junction_6	30381.248715027745	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	98	1474	20.0	10	True	AATAAA	-29
PB.7359.5	chr20	-	6230	11	full-splice_match	NFATC2	ENST00000609507.1	2662	11	-218	-3350	-218	748	multi-exon	FALSE	canonical	1	5792	junction_10	32202.322711879035	NA	8	NA	TRUE	NA	NA	NA	C	coding	702	2109	504	2612	95.0	17	True	NA	NA
PB.9548.12	chr5	+	4446	23	novel_not_in_catalog	FBXO38	novel	3680	21	NA	NA	2	0	any annotated donor/acceptor	FALSE	canonical	1	234	junction_8	75540.71282952913	NA	0	NA	TRUE	NA	NA	NA	C	coding	847	2544	1214	3757	15.0	13	True	AATAAA	-18
PB.7359.3	chr20	-	6514	10	full-splice_match	NFATC2	ENST00000396009.7	7437	10	2	921	2	748	multi-exon	TRUE	canonical	1	21370	junction_9	31677.434706042022	NA	2	NA	TRUE	NA	NA	NA	C	coding	925	2778	219	2996	95.0	-19	True	NA	NA
PB.7359.2	chr20	-	6533	11	full-splice_match	NFATC2	ENST00000414705.5	2974	11	-209	-3350	-7	748	multi-exon	FALSE	canonical	1	4785	junction_10	32387.620074497605	NA	5	NA	TRUE	NA	NA	NA	C	coding	901	2706	210	2915	95.0	0	True	NA	NA
PB.7359.1	chr20	-	6616	11	full-splice_match	NFATC2	ENST00000371564.7	7525	11	-12	921	-12	748	multi-exon	FALSE	canonical	1	21370	junction_10	29582.00843485784	NA	1	NA	TRUE	NA	NA	NA	C	coding	921	2766	233	2998	95.0	-33	True	NA	NA
PB.8255.2	chr3	-	2090	6	full-splice_match	CLDND1	ENST00000394181.6	2170	6	90	-10	3	0	multi-exon	FALSE	canonical	1	39569	junction_5	504542.6080879988	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	74	904	30.0	-4	True	AATAAA	-29
PB.1214.9	chr1	-	2066	16	incomplete-splice_match	ARID4B	ENST00000491632.5	3823	20	-34	42177	-6	134	3prime_fragment	FALSE	canonical	1	212927	junction_8	47161.96473826481	NA	1	NA	TRUE	NA	NA	NA	C	coding	527	1581	484	2064	30.0	590	False	CATAAA	-34
PB.3333.1	chr14	-	3729	6	incomplete-splice_match	JPH4	ENST00000397118.7	4386	7	786	56	-542	-56	5prime_fragment	FALSE	canonical	1	3206	junction_5	60956.81794516509	NA	0	NA	TRUE	NA	NA	NA	A	coding	628	1887	303	2189	70.0	-1	True	NA	NA
PB.1214.8	chr1	-	2373	18	incomplete-splice_match	ARID4B	ENST00000264183.8	4995	24	-44	28159	-10	-15904	3prime_fragment	FALSE	canonical	1	210820	junction_1	47350.37015380579	NA	0	NA	TRUE	NA	NA	NA	C	coding	638	1914	460	2373	55.0	-11	True	GATAAA	-25
PB.9246.8	chr5	+	4191	20	novel_in_catalog	KIF2A	novel	2539	20	NA	NA	22	1024	combination_of_known_junctions	FALSE	canonical	1	246636	junction_5	107031.2573119572	NA	1	NA	TRUE	NA	NA	NA	C	coding	687	2064	290	2353	45.0	-260	False	AATAAA	-30
PB.1464.2	chr10	-	2743	15	full-splice_match	P4HA1	ENST00000307116.6	2727	15	-16	0	-16	0	multi-exon	FALSE	canonical	1	275909	junction_6	244966.20321699692	NA	1	NA	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	0.0	-1	True	TTTAAA	-5
PB.451.2	chr1	+	3799	7	novel_not_in_catalog	EFCAB7	novel	625	4	NA	NA	129	3154	any annotated donor/acceptor	FALSE	canonical	1	4205	junction_6	30562.41682560825	NA	5	NA	TRUE	NA	NA	NA	C	coding	285	858	118	975	20.0	-33	True	AATAAA	-17
PB.451.3	chr1	+	2961	2	incomplete-splice_match	EFCAB7	ENST00000371088.4	2313	14	171	44235	171	-4238	3prime_fragment	FALSE	canonical	1	80087	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	-11	False	NA	NA
PB.451.4	chr1	+	4510	7	incomplete-splice_match	EFCAB7	ENST00000371088.4	2313	14	183	23135	183	-2328	3prime_fragment	FALSE	canonical	1	51988	junction_6	13570.515912775347	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	64	1038	75.0	1	True	AAAAAG	-37
PB.9271.2	chr5	+	4765	9	full-splice_match	OCLN	ENST00000355237.6	6438	9	227	1446	227	-1446	multi-exon	FALSE	canonical	1	926	junction_5	49967.26545684059	NA	3	NA	TRUE	NA	NA	NA	C	coding	522	1569	210	1778	25.0	0	True	AATAAA	-14
PB.9271.3	chr5	+	2664	9	full-splice_match	OCLN	ENST00000355237.6	6438	9	233	3541	233	564	multi-exon	FALSE	canonical	1	926	junction_5	49967.26545684059	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	204	1772	30.0	-265	False	ATTAAA	-15
PB.1464.1	chr10	-	3712	15	full-splice_match	P4HA1	ENST00000307116.6	2727	15	-16	-969	-16	969	multi-exon	TRUE	canonical	1	275909	junction_6	244966.20321699692	NA	3	1	TRUE	NA	NA	NA	C	coding	534	1605	134	1738	25.0	-1	True	ATTAAA	-13
PB.9271.6	chr5	+	2393	9	full-splice_match	OCLN	ENST00000396442.6	1748	9	-18	-627	-18	299	multi-exon	FALSE	canonical	1	926	junction_5	48148.070117087766	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	198	1766	55.0	-18	True	AATAAA	-9
PB.9271.7	chr5	+	4469	9	full-splice_match	OCLN	ENST00000396442.6	1748	9	-13	-2708	-13	-1725	multi-exon	FALSE	canonical	1	926	junction_5	48148.070117087766	NA	1	NA	TRUE	NA	NA	NA	C	coding	522	1569	193	1761	45.0	-13	True	AATAAA	-16
PB.1657.8	chr10	-	2174	11	full-splice_match	ZDHHC6	ENST00000369405.7	2170	11	-7	3	-4	-3	multi-exon	FALSE	canonical	1	289838	junction_10	48302.27560643494	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	432	1673	35.0	-8	True	AATAAA	-20
PB.1657.9	chr10	-	2382	11	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-655	-5	any annotated donor/acceptor	FALSE	canonical	1	4398	junction_10	116525.44132145563	NA	1	1	TRUE	NA	NA	NA	C	coding	413	1242	642	1883	35.0	-1	True	AATAAA	-18
PB.1657.6	chr10	-	2175	12	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-20	-2	any annotated donor/acceptor	FALSE	canonical	1	19077	junction_5	157041.77457206664	NA	1	NA	TRUE	NA	NA	NA	C	coding	199	600	668	1267	35.0	9	True	AATAAA	-21
PB.1657.7	chr10	-	2110	11	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-1	-2	any annotated donor/acceptor	FALSE	canonical	1	10655	junction_10	114780.06853739895	NA	0	NA	TRUE	NA	NA	NA	C	coding	413	1242	367	1608	35.0	-5	True	AATAAA	-21
PB.1657.4	chr10	-	3116	10	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	24101	junction_7	117798.73958557713	NA	1	1	TRUE	NA	NA	NA	C	coding	221	666	670	1335	35.0	7	True	AATAAA	-21
PB.1657.5	chr10	-	2274	12	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-27	-2	any annotated donor/acceptor	FALSE	canonical	1	19077	junction_5	135912.09051898096	NA	2	NA	TRUE	NA	NA	NA	C	coding	303	912	455	1366	35.0	2	True	AATAAA	-21
PB.1657.2	chr10	-	3339	11	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-32	-2	intron_retention	FALSE	canonical	1	7250	junction_6	149639.02812715672	NA	1	NA	TRUE	NA	NA	NA	C	coding	278	837	460	1296	35.0	-3	True	AATAAA	-21
PB.1657.3	chr10	-	3183	10	novel_in_catalog	ZDHHC6	novel	2906	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	289838	junction_9	49468.68786476682	NA	1	NA	TRUE	NA	NA	NA	C	coding	325	978	425	1402	35.0	-1	True	AATAAA	-21
PB.9287.3	chr5	+	3412	25	full-splice_match	TNPO1	ENST00000337273.9	11183	25	338	7433	1	349	multi-exon	FALSE	canonical	1	167413	junction_3	160524.4582500884	NA	1	NA	TRUE	NA	NA	NA	C	coding	898	2697	89	2785	75.0	-11	True	AAAAAG	-5
PB.1657.1	chr10	-	2289	12	novel_not_in_catalog	ZDHHC6	novel	2906	12	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	9258	junction_5	137784.8151660065	NA	2	1	TRUE	NA	NA	NA	C	coding	317	954	447	1400	35.0	10	True	AATAAA	-22
PB.4418.4	chr16	+	2957	16	novel_not_in_catalog	HEATR3	novel	3560	15	NA	NA	-18	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	73020.328934528	NA	1	1	TRUE	NA	NA	NA	C	coding	680	2043	155	2197	35.0	-14	True	AATAAA	-15
PB.4418.5	chr16	+	2974	16	novel_not_in_catalog	HEATR3	novel	3560	15	NA	NA	-12	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	80651.9864797445	NA	3	NA	TRUE	NA	NA	NA	C	coding	563	1692	523	2214	35.0	-8	True	AATAAA	-15
PB.932.2	chr1	-	2742	9	novel_not_in_catalog	VAMP4	novel	5159	8	NA	NA	-12	-10	any annotated donor/acceptor	FALSE	canonical	1	10319	junction_4	66188.16359440712	NA	0	NA	TRUE	NA	NA	NA	C	coding	106	321	227	547	60.0	-22	True	AATAAA	-12
PB.9396.1	chr5	+	2775	8	full-splice_match	KCNN2	ENST00000264773.7	2512	8	-265	2	-265	0	multi-exon	FALSE	canonical	1	47311	junction_1	11239.475692252494	NA	0	NA	TRUE	NA	NA	NA	A	coding	791	2376	87	2462	20.0	-28	True	AATAAA	-17
PB.1464.4	chr10	-	2599	14	novel_in_catalog	P4HA1	novel	2727	15	NA	NA	-16	1	no_combination_of_known_junctions	FALSE	canonical	1	7307	junction_10	284011.68833694153	NA	0	NA	TRUE	NA	NA	NA	C	coding	488	1467	134	1600	30.0	-1	True	NA	NA
PB.4418.2	chr16	+	2280	15	full-splice_match	HEATR3	ENST00000299192.7	3560	15	28	1252	-27	-1252	multi-exon	FALSE	canonical	1	63815	junction_1	58755.64640569467	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	164	2206	30.0	-23	True	ACTAAA	-17
PB.4418.3	chr16	+	3023	16	novel_not_in_catalog	HEATR3	novel	3560	15	NA	NA	-26	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_15	73020.328934528	NA	2	1	TRUE	NA	NA	NA	C	coding	680	2043	163	2205	35.0	-22	True	AATAAA	-15
PB.8451.1	chr3	+	1617	3	full-splice_match	C3orf58	ENST00000315691.7	4346	3	271	2458	271	132	multi-exon	FALSE	canonical	1	128748	junction_1	22747.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	430	1293	265	1557	65.0	-2	True	ACTAAA	-6
PB.8451.3	chr3	+	3775	2	novel_in_catalog	C3orf58	novel	4346	3	NA	NA	273	-2	no_combination_of_known_junctions	FALSE	canonical	1	4638	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	320	963	263	1225	25.0	0	True	AATAAA	-17
PB.8255.8	chr3	-	6009	2	full-splice_match	CLDND1	ENST00000502980.1	778	2	-23	-5208	-3	-24	multi-exon	FALSE	canonical	1	586990	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	117	354	96	449	75.0	-1	True	NA	NA
PB.8451.4	chr3	+	3222	3	full-splice_match	C3orf58	ENST00000315691.7	4346	3	1123	1	44	-1	multi-exon	FALSE	canonical	1	128748	junction_1	22747.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	228	687	19	705	40.0	-437	False	AATAAA	-10
PB.9420.17	chr5	+	2848	6	novel_not_in_catalog	PHAX	novel	4288	5	NA	NA	29	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	157911.36714701698	NA	4	1	TRUE	NA	NA	NA	C	coding	394	1185	10	1194	35.0	7	True	AATAAA	-22
PB.219.1	chr1	+	2211	3	full-splice_match	XKR8	ENST00000373884.5	2692	3	478	3	478	-3	multi-exon	FALSE	canonical	1	67183	junction_1	3774.5	NA	1	NA	TRUE	NA	NA	NA	A	coding	395	1188	131	1318	25.0	-105	False	AATAAA	-17
PB.8582.18	chr3	-	3755	13	full-splice_match	ETV5	ENST00000306376.9	4111	13	3	353	3	-353	multi-exon	FALSE	canonical	1	44807	junction_12	67385.64660758419	NA	2	NA	TRUE	NA	NA	NA	C	coding	510	1533	245	1777	25.0	-21	True	NA	NA
PB.10286.2	chr6	+	2586	5	full-splice_match	ARMT1	ENST00000367294.3	2576	5	193	-203	-6	203	multi-exon	FALSE	canonical	1	307258	junction_2	12155.307996920523	NA	2	NA	TRUE	NA	NA	NA	C	coding	441	1326	67	1392	20.0	-10	True	ATTAAA	-42
PB.9559.1	chr5	-	5757	23	full-splice_match	PDGFRB	ENST00000261799.8	5717	23	-45	5	-33	0	multi-exon	TRUE	canonical	1	204276	junction_22	62816.91506320453	NA	0	NA	TRUE	NA	NA	NA	A	coding	1100	3303	534	3836	15.0	2354	False	ATTAAA	-18
PB.8370.1	chr3	-	3535	2	intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4258	junction_1	0.0	NA	1	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	10.0	8614	False	NA	NA
PB.8370.3	chr3	-	2266	2	intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4258	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-4	True	NA	NA
PB.7906.6	chr3	+	4614	19	novel_not_in_catalog	ITPR1	novel	9767	59	NA	NA	-18431	-2	any annotated donor/acceptor	FALSE	canonical	1	1600	junction_1	90411.41934157447	NA	1	NA	TRUE	NA	NA	NA	C	coding	916	2751	585	3335	10.0	-8105	False	AATAAA	-19
PB.10805.1	chr7	+	3723	1	novel_in_catalog	KCND2	novel	5331	6	NA	NA	-126411	-129567	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	NA	False	NA	NA
PB.1022.30	chr1	+	2996	27	incomplete-splice_match	PTPRC	ENST00000442510.7	5390	33	71	9322	5	-6303	3prime_fragment	FALSE	canonical	1	197273	junction_3	331620.02101167315	NA	0	NA	TRUE	NA	NA	NA	C	coding	964	2892	104	2995	75.0	-17	True	NA	NA
PB.3323.1	chr14	+	1088	2	full-splice_match	C14orf119	ENST00000319074.5	3660	2	720	1852	-40	339	multi-exon	FALSE	canonical	1	847503	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	137	559	15.0	-75	False	AATAAA	-26
PB.3323.2	chr14	+	945	2	full-splice_match	C14orf119	ENST00000319074.5	3660	2	740	1975	-20	216	multi-exon	FALSE	canonical	1	847503	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	140	423	117	539	15.0	-55	True	AATAAA	-20
PB.3323.3	chr14	+	1522	2	full-splice_match	C14orf119	ENST00000319074.5	3660	2	795	1343	35	848	multi-exon	FALSE	canonical	1	847503	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	140	423	62	484	30.0	0	True	AATAAA	-21
PB.447.7	chr1	+	2686	11	full-splice_match	ATG4C	ENST00000317868.8	2938	11	2	250	2	-250	multi-exon	FALSE	canonical	1	52956	junction_1	48721.310432294405	NA	0	NA	TRUE	NA	NA	NA	C	coding	458	1377	206	1582	45.0	0	True	AATAAA	-17
PB.6604.23	chr2	+	2681	23	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	-9	1304	any annotated donor/acceptor	FALSE	canonical	1	61	junction_14	193418.11431368886	NA	18	2	TRUE	NA	NA	NA	C	coding	410	1233	14	1246	35.0	0	True	AATATA	-25
PB.8667.7	chr4	+	2775	12	novel_in_catalog	SH3BP2	novel	2265	13	NA	NA	28	0	intron_retention	FALSE	canonical	1	46157	junction_1	108614.55183193868	NA	1	NA	TRUE	NA	NA	NA	C	coding	440	1323	994	2316	5.0	-5941	False	AATAAA	-22
PB.2074.1	chr11	+	816	7	full-splice_match	DRAP1	ENST00000312515.6	989	7	174	-1	-6	1	multi-exon	TRUE	canonical	1	2367116	junction_6	537210.6465220759	NA	0	NA	TRUE	NA	NA	NA	A	coding	205	618	72	689	20.0	-6	True	AATAAA	-23
PB.11866.18	chr9	-	3152	10	incomplete-splice_match	SETX	ENST00000224140.5	11100	26	-2	67275	-2	-45861	3prime_fragment	FALSE	canonical	1	189648	junction_6	47646.45042263425	NA	0	NA	TRUE	NA	NA	NA	C	coding	989	2967	186	3152	70.0	-2	True	NA	NA
PB.7909.2	chr3	+	5834	12	full-splice_match	EDEM1	ENST00000256497.8	6146	12	319	-7	186	7	multi-exon	FALSE	canonical	1	218361	junction_1	108025.90711950415	NA	4	NA	TRUE	NA	NA	NA	C	coding	564	1695	94	1788	15.0	-9091	False	ATTAAA	-23
PB.6604.21	chr2	+	3693	22	novel_in_catalog	PTCD3	novel	6734	24	NA	NA	8	1312	intron_retention	FALSE	canonical	1	92112	junction_3	153542.5370779859	NA	2	1	TRUE	NA	NA	NA	C	coding	387	1164	15	1178	20.0	-1	True	AATATA	-33
PB.8696.6	chr4	-	2465	18	full-splice_match	ACOX3	ENST00000356406.9	2860	18	-36	431	-24	-1	multi-exon	FALSE	canonical	1	21444	junction_17	33767.091508057	NA	0	NA	TRUE	NA	NA	NA	C	coding	700	2103	115	2217	10.0	-25	False	AAGAAA	-23
PB.7909.3	chr3	+	5570	12	novel_in_catalog	EDEM1	novel	978	8	NA	NA	-23	4	no_combination_of_known_junctions	FALSE	canonical	1	844	junction_1	152659.19237383446	NA	1	NA	TRUE	NA	NA	NA	C	coding	462	1389	139	1527	10.0	-9460	False	ATTAAA	-20
PB.3300.1	chr14	+	2376	1	antisense	novelGene_HNRNPC_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	B	non_coding	NA	NA	NA	NA	15.0	-4731	False	NA	NA
PB.11005.6	chr8	+	2585	17	novel_in_catalog	INTS10	novel	2804	17	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	1	5413	junction_1	128191.19061672832	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	328	2325	45.0	1	True	AATAAA	-18
PB.11005.5	chr8	+	2581	18	novel_in_catalog	INTS10	novel	2804	17	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	29195	junction_16	153378.48865363988	NA	0	NA	TRUE	NA	NA	NA	C	coding	736	2211	113	2323	45.0	0	True	AATAAA	-16
PB.11005.4	chr8	+	2443	17	novel_in_catalog	INTS10	novel	2804	17	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	1	5592	junction_7	127978.39148264201	NA	0	NA	TRUE	NA	NA	NA	C	coding	689	2070	115	2184	45.0	-2	True	AATAAA	-17
PB.11005.3	chr8	+	2214	16	incomplete-splice_match	INTS10	ENST00000397977.7	2804	17	276	6165	-21	-1	3prime_fragment	FALSE	canonical	1	382701	junction_2	52594.31628464133	NA	0	NA	TRUE	NA	NA	NA	C	coding	659	1980	123	2102	15.0	-10	True	AATACA	-17
PB.11005.2	chr8	+	2748	18	novel_in_catalog	INTS10	novel	2804	17	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	10266	junction_2	183167.56492248626	NA	6	1	TRUE	NA	NA	NA	C	coding	623	1872	617	2488	45.0	1	True	AATAAA	-18
PB.11005.1	chr8	+	2504	17	full-splice_match	INTS10	ENST00000397977.7	2804	17	294	6	-3	5	multi-exon	FALSE	canonical	1	382701	junction_2	51465.459479969424	NA	0	NA	TRUE	NA	NA	NA	C	coding	710	2133	105	2237	45.0	8	True	AATAAA	-25
PB.5642.1	chr19	-	2154	3	full-splice_match	NDUFA11	ENST00000592634.5	2154	3	1	-1	1	1	multi-exon	FALSE	canonical	1	3211981	junction_2	650666.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	120	363	63	425	10.0	15	True	AATAAA	-19
PB.5642.2	chr19	-	573	4	full-splice_match	NDUFA11	ENST00000308961.4	539	4	-32	-2	-2	0	multi-exon	FALSE	canonical	1	2595159	junction_1	799531.4989693791	NA	0	NA	TRUE	NA	NA	NA	C	coding	141	426	81	506	10.0	-3	True	AATAAA	-18
PB.6604.25	chr2	+	2014	23	novel_not_in_catalog	PTCD3	novel	6734	24	NA	NA	-9	-3	any annotated donor/acceptor	FALSE	canonical	1	900	junction_22	170455.77709368366	NA	0	NA	TRUE	NA	NA	NA	C	coding	609	1830	14	1843	30.0	0	True	AATAAA	-26
PB.9807.2	chr6	+	2755	1	full-splice_match	HIST1H2AG	ENST00000359193.3	2250	1	0	-505	0	505	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	130	393	31	423	40.0	-1	True	AATAAA	-11
PB.9807.1	chr6	+	2254	1	full-splice_match	HIST1H2AG	ENST00000359193.3	2250	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	130	393	35	427	35.0	-5	True	NA	NA
PB.7909.7	chr3	+	6045	11	novel_in_catalog	EDEM1	novel	978	8	NA	NA	-13	6	no_combination_of_known_junctions	FALSE	canonical	1	1535	junction_1	154643.5831098077	NA	5	NA	TRUE	NA	NA	NA	C	coding	462	1389	612	2000	15.0	0	True	ATTAAA	-22
PB.5132.18	chr17	+	3159	10	novel_not_in_catalog	MSI2	novel	1714	14	NA	NA	-1552	1521	any annotated donor/acceptor	FALSE	canonical	1	1493	junction_1	170687.0377066218	NA	3	NA	TRUE	NA	NA	NA	C	coding	224	675	184	858	85.0	-4071	False	CATAAA	-23
PB.5132.19	chr17	+	3025	10	novel_not_in_catalog	MSI2	novel	1714	14	NA	NA	-15610	1522	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	197497.8410603675	NA	4	1	TRUE	NA	NA	NA	C	coding	207	624	100	723	90.0	NA	False	CATAAA	-24
PB.7909.4	chr3	+	5699	13	novel_not_in_catalog	EDEM1	novel	978	8	NA	NA	4	6	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	154176.319591852	NA	1	NA	TRUE	NA	NA	NA	C	coding	515	1548	107	1654	15.0	0	True	ATTAAA	-22
PB.5801.14	chr19	-	2003	4	full-splice_match	EPS15L1	ENST00000602151.1	420	4	-23	-1560	0	1560	multi-exon	FALSE	canonical	1	159470	junction_3	61896.894840443245	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	3	True	TTTAAA	-25
PB.5132.10	chr17	+	3432	13	novel_in_catalog	MSI2	novel	1714	14	NA	NA	47	1522	no_combination_of_known_junctions	FALSE	canonical	1	40574	junction_12	165612.07001571136	NA	3	1	TRUE	NA	NA	NA	C	coding	346	1041	163	1203	90.0	-867	False	CATAAA	-24
PB.5132.11	chr17	+	3354	14	novel_in_catalog	MSI2	novel	1714	14	NA	NA	71	1395	combination_of_known_junctions	FALSE	canonical	1	114280	junction_11	120983.57094480314	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	139	1179	0.0	2	True	AATAAA	-23
PB.5132.12	chr17	+	3251	15	novel_not_in_catalog	MSI2	novel	1714	14	NA	NA	98	1521	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	156571.02607099267	NA	1	NA	TRUE	NA	NA	NA	C	coding	328	987	112	1098	85.0	-816	False	CATAAA	-23
PB.5132.13	chr17	+	2731	14	novel_in_catalog	MSI2	novel	1714	14	NA	NA	98	799	combination_of_known_junctions	FALSE	canonical	1	114280	junction_11	120983.57094480314	NA	1	NA	TRUE	NA	NA	NA	C	coding	346	1041	112	1152	75.0	-816	False	NA	NA
PB.5132.14	chr17	+	1926	11	novel_in_catalog	MSI2	novel	1714	14	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	1	48033	junction_10	146588.4255193431	NA	0	NA	TRUE	NA	NA	NA	C	coding	255	768	90	857	25.0	-1	True	ATTAAA	-13
PB.5132.15	chr17	+	3389	13	incomplete-splice_match	MSI2	ENST00000284073.6	6364	14	402	2866	-77	1522	5prime_fragment	FALSE	canonical	1	169822	junction_10	113548.96156513644	NA	4	NA	TRUE	NA	NA	NA	C	coding	324	975	113	1087	90.0	-512	False	CATAAA	-24
PB.5132.16	chr17	+	3341	13	incomplete-splice_match	MSI2	ENST00000416426.6	1714	14	1187	-1698	-4	1522	5prime_fragment	FALSE	canonical	1	114280	junction_10	125455.70970872881	NA	4	NA	TRUE	NA	NA	NA	C	coding	342	1029	11	1039	90.0	14	True	CATAAA	-24
PB.8074.1	chr3	+	8602	53	novel_in_catalog	NBEAL2	novel	8827	54	NA	NA	141	-3	no_combination_of_known_junctions	TRUE	canonical	1	84651	junction_1	135032.7180517336	NA	3	NA	TRUE	NA	NA	NA	A	coding	2727	8184	39	8222	10.0	1	True	AATAAA	-17
PB.11466.13	chr9	-	1683	14	incomplete-splice_match	PSIP1	ENST00000380738.8	3364	16	-7	4625	-7	1945	3prime_fragment	FALSE	canonical	1	122085	junction_6	374234.231924845	NA	0	NA	TRUE	NA	NA	NA	C	coding	453	1359	325	1683	60.0	1	True	AATAAA	-34
PB.1380.1	chr10	-	1549	1	full-splice_match	AC010864.1	ENST00000609407.1	1511	1	-37	-1	-37	1	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	5	NA	NA	NA	NA	NA	A	coding	105	318	1	318	15.0	4	True	AAAACA	-25
PB.4000.9	chr15	+	2753	7	full-splice_match	FBXO22	ENST00000308275.7	10725	7	70	7902	-29	318	multi-exon	FALSE	canonical	1	334212	junction_2	71671.39240543143	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	36	1247	20.0	-7	True	GATAAA	-17
PB.4000.8	chr15	+	2257	7	full-splice_match	FBXO22	ENST00000308275.7	10725	7	68	8400	-31	3	multi-exon	FALSE	canonical	1	334212	junction_2	71671.39240543143	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	38	1249	15.0	-9	True	NA	NA
PB.4000.7	chr15	+	2128	6	full-splice_match	FBXO22	ENST00000569022.1	2164	6	38	-2	38	2	multi-exon	FALSE	canonical	1	40053	junction_1	181022.54851216738	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	222	1121	15.0	-20	True	NA	NA
PB.4000.6	chr15	+	5408	6	full-splice_match	FBXO22	ENST00000453211.6	1486	6	32	-3954	32	319	multi-exon	FALSE	canonical	1	334212	junction_2	76475.89393161742	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	55	885	25.0	-26	True	GATAAA	-18
PB.4000.5	chr15	+	2619	7	full-splice_match	FBXO22	ENST00000308275.7	10725	7	21	8085	2	135	multi-exon	FALSE	canonical	1	334212	junction_2	71671.39240543143	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	85	1296	25.0	2	True	AATACA	-19
PB.4000.4	chr15	+	2016	7	full-splice_match	FBXO22	ENST00000308275.7	10725	7	24	8685	5	-1	multi-exon	FALSE	canonical	1	334212	junction_2	71671.39240543143	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	82	1293	25.0	5	True	AATAAA	-17
PB.4000.3	chr15	+	1323	7	full-splice_match	FBXO22	ENST00000308275.7	10725	7	19	9383	0	329	multi-exon	FALSE	canonical	1	334212	junction_2	71671.39240543143	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	87	1298	10.0	0	True	ATTAAA	-18
PB.4000.2	chr15	+	3469	7	full-splice_match	FBXO22	ENST00000308275.7	10725	7	5	7251	5	969	multi-exon	FALSE	canonical	1	334212	junction_2	71671.39240543143	NA	0	NA	TRUE	NA	NA	NA	C	coding	403	1212	101	1312	60.0	-72	False	ATTAAA	-13
PB.4000.1	chr15	+	3978	6	full-splice_match	FBXO22	ENST00000453211.6	1486	6	-20	-2472	-1	329	multi-exon	FALSE	canonical	1	334212	junction_2	76475.89393161742	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	107	937	10.0	-78	False	ATTAAA	-18
PB.8769.2	chr4	+	4911	8	full-splice_match	SLAIN2	ENST00000264313.10	6299	8	215	1173	215	24	multi-exon	FALSE	canonical	1	187169	junction_1	101210.85045788402	NA	3	NA	TRUE	NA	NA	NA	C	coding	581	1746	204	1949	35.0	-18	True	ATTAAA	-25
PB.8769.1	chr4	+	4516	9	novel_in_catalog	SLAIN2	novel	6299	8	NA	NA	245	-419	intron_retention	FALSE	canonical	1	158339	junction_6	129825.07733527207	NA	2	NA	TRUE	NA	NA	NA	C	coding	607	1824	174	1997	25.0	12	True	AATAAA	-40
PB.8769.7	chr4	+	5922	8	full-splice_match	SLAIN2	ENST00000264313.10	6299	8	151	226	151	-226	multi-exon	FALSE	canonical	1	187169	junction_1	101210.85045788402	NA	5	NA	TRUE	NA	NA	NA	C	coding	581	1746	268	2013	50.0	0	True	AATAAA	-17
PB.11343.3	chr8	-	3790	12	full-splice_match	FAM49B	ENST00000519824.6	3798	12	6	2	6	-2	multi-exon	FALSE	canonical	1	154438	junction_11	256611.83436920942	NA	1	NA	TRUE	NA	NA	NA	C	coding	324	975	269	1243	25.0	-16	True	NA	NA
PB.889.1	chr1	+	2809	1	incomplete-splice_match	DDR2	ENST00000367922.7	10160	19	151350	777	16525	-777	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	NA	False	TATAAA	-29
PB.8769.6	chr4	+	5030	9	novel_in_catalog	SLAIN2	novel	6299	8	NA	NA	147	-3	intron_retention	FALSE	canonical	1	158339	junction_6	129825.07733527207	NA	0	NA	TRUE	NA	NA	NA	C	coding	607	1824	272	2095	35.0	-4	True	AATAAA	-26
PB.1819.27	chr11	-	2452	12	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_8	2372190.3011927134	NA	0	NA	TRUE	NA	NA	NA	C	coding	337	1014	675	1688	25.0	-1	True	AATAAA	-18
PB.6711.7	chr2	+	2294	6	full-splice_match	STEAP3	ENST00000393110.6	4262	6	10	1958	10	-4	multi-exon	FALSE	canonical	1	23185	junction_1	99778.00237326862	NA	4	NA	TRUE	NA	NA	NA	C	coding	498	1497	442	1938	20.0	5	True	NA	NA
PB.1819.21	chr11	-	3630	20	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	0	1	intron_retention	FALSE	canonical	1	50409	junction_18	2105684.185672731	NA	12	1	TRUE	NA	NA	NA	C	coding	663	1992	875	2866	25.0	-15	True	AATAAA	-18
PB.1819.20	chr11	-	3642	22	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	1	intron_retention	FALSE	canonical	1	44614	junction_4	1705935.252151694	NA	0	NA	TRUE	NA	NA	NA	C	coding	466	1401	927	2327	25.0	-1	True	AATAAA	-18
PB.1819.22	chr11	-	3475	21	novel_not_in_catalog	EIF4G2	novel	4001	22	NA	NA	-1	1	intron_retention	FALSE	canonical	1	799	junction_20	2010974.8421431952	NA	0	NA	TRUE	NA	NA	NA	C	coding	663	1992	720	2711	25.0	0	True	AATAAA	-18
PB.8769.4	chr4	+	2474	9	novel_in_catalog	SLAIN2	novel	6299	8	NA	NA	217	2037	intron_retention	FALSE	canonical	1	158339	junction_6	129825.07733527207	NA	1	1	TRUE	NA	NA	NA	C	coding	607	1824	202	2025	40.0	-16	True	AATAAA	-17
PB.1819.29	chr11	-	3878	21	novel_in_catalog	EIF4G2	novel	4001	22	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3229390	junction_20	1143444.455678319	NA	0	NA	TRUE	NA	NA	NA	C	coding	510	1533	1584	3116	15.0	-1	True	AATAAA	-16
PB.9413.8	chr5	+	1958	14	novel_in_catalog	SNX2	novel	2128	15	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	14345	junction_12	280465.3180093025	NA	1	NA	TRUE	NA	NA	NA	C	coding	492	1479	23	1501	55.0	0	True	AATAAA	-16
PB.8793.1	chr4	-	3585	11	full-splice_match	PPAT	ENST00000264220.6	3682	11	7	90	7	-87	multi-exon	FALSE	canonical	1	24872	junction_1	59558.05574471014	NA	5	NA	TRUE	NA	NA	NA	C	coding	517	1554	132	1685	30.0	3	True	TATAAA	-28
PB.9431.31	chr5	+	3705	6	novel_not_in_catalog	CDC42SE2	novel	539	4	NA	NA	499	4	intron_retention	FALSE	canonical	1	2335	junction_1	265829.1515628788	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-4178	False	AATAAA	-18
PB.304.1	chr1	-	1719	6	full-splice_match	FHL3	ENST00000373016.3	1647	6	-70	-2	31	2	multi-exon	FALSE	canonical	1	149549	junction_5	160919.49661293376	NA	0	NA	TRUE	NA	NA	NA	C	coding	280	843	240	1082	5.0	78	False	AATAAA	-16
PB.304.2	chr1	-	1477	5	novel_in_catalog	FHL3	novel	1468	5	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	19606	junction_2	247215.07119358642	NA	1	NA	TRUE	NA	NA	NA	C	coding	120	363	172	534	15.0	6	True	AATAAA	-12
PB.11625.7	chr9	-	2748	15	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	7	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	781904.0001667567	NA	2	1	TRUE	NA	NA	NA	B	coding	439	1320	199	1518	15.0	355	False	AATAAA	-21
PB.564.3	chr1	+	2709	10	novel_in_catalog	TRMT13	novel	476	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	5914	junction_9	55810.94163024237	NA	0	NA	TRUE	NA	NA	NA	C	coding	251	756	115	870	25.0	-15	True	AATAAA	-17
PB.11625.6	chr9	-	2839	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	-11	20	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	697968.3980631661	NA	3	1	TRUE	NA	NA	NA	B	coding	458	1377	233	1609	15.0	-29	True	AATAAA	-21
PB.6923.3	chr2	-	2243	12	full-splice_match	HSPD1	ENST00000388968.7	2455	12	206	6	-1	-1	multi-exon	FALSE	canonical	1	616249	junction_9	725493.8293174421	NA	0	NA	TRUE	NA	NA	NA	C	coding	573	1722	63	1784	30.0	-2	True	AATAAA	-15
PB.11010.1	chr8	-	1857	5	full-splice_match	DOK2	ENST00000276420.8	1936	5	75	4	75	-4	multi-exon	FALSE	canonical	1	93245	junction_2	19086.56356412804	NA	2	NA	TRUE	NA	NA	NA	A	coding	412	1239	185	1423	25.0	4614	False	ATTAAA	-11
PB.11625.5	chr9	-	2857	16	novel_not_in_catalog	HNRNPK	novel	2928	17	NA	NA	9	25	any annotated donor/acceptor	FALSE	canonical	0	0	junction_3	791174.2604600386	NA	2	1	TRUE	NA	NA	NA	B	coding	463	1392	231	1622	25.0	357	False	AATAAA	-26
PB.2145.5	chr11	-	5083	33	novel_in_catalog	ARAP1	novel	2758	20	NA	NA	-50	-1	no_combination_of_known_junctions	FALSE	canonical	1	39464	junction_32	229469.27192695436	NA	0	NA	TRUE	NA	NA	NA	C	coding	1439	4320	171	4490	15.0	-46	False	TATAAA	-21
PB.2145.4	chr11	-	5127	34	novel_in_catalog	ARAP1	novel	2758	20	NA	NA	-60	0	no_combination_of_known_junctions	FALSE	canonical	1	39464	junction_33	242910.8934665737	NA	1	NA	TRUE	NA	NA	NA	C	coding	1450	4353	181	4533	15.0	-56	False	TATAAA	-22
PB.10048.3	chr6	-	4193	4	novel_in_catalog	LINC00680-GUSBP4	novel	675	7	NA	NA	-42	-26168	intron_retention	FALSE	canonical	1	44542	junction_1	18510.404983864257	NA	1	NA	TRUE	NA	NA	NA	B	coding	161	486	1880	2365	10.0	-30	False	AATAAA	-18
PB.2145.6	chr11	-	4949	33	full-splice_match	ARAP1	ENST00000334211.12	4942	33	-3	-4	-3	-1	multi-exon	FALSE	canonical	1	150264	junction_32	227750.78608958054	NA	1	NA	TRUE	NA	NA	NA	C	coding	1205	3618	739	4356	15.0	-22	True	TATAAA	-21
PB.2145.1	chr11	-	4897	32	full-splice_match	ARAP1	ENST00000426523.5	4066	32	-313	-518	17	0	multi-exon	FALSE	canonical	1	150264	junction_31	210703.71511076807	NA	0	NA	TRUE	NA	NA	NA	C	coding	1194	3585	719	4303	15.0	-2	True	TATAAA	-22
PB.2145.3	chr11	-	5155	34	novel_in_catalog	ARAP1	novel	2758	20	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	101055	junction_33	235926.54140139752	NA	0	NA	TRUE	NA	NA	NA	C	coding	1439	4320	242	4561	15.0	-34	False	TATAAA	-22
PB.2145.2	chr11	-	5204	35	full-splice_match	ARAP1	ENST00000393609.7	5145	35	-54	-5	-54	0	multi-exon	FALSE	canonical	1	101055	junction_34	247614.80117101103	NA	0	NA	TRUE	NA	NA	NA	C	coding	1450	4353	258	4610	15.0	-50	False	TATAAA	-22
PB.6900.4	chr2	+	3627	14	novel_in_catalog	PMS1	novel	2506	10	NA	NA	18	0	no_combination_of_known_junctions	FALSE	canonical	1	8456	junction_1	77220.99023478161	NA	3	1	TRUE	NA	NA	NA	C	coding	932	2799	638	3436	35.0	-409	False	AATAAA	-16
PB.9074.5	chr4	+	1325	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	-1	3247	-1	592	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	169	657	20.0	-25	True	TTTAAA	-17
PB.6900.6	chr2	+	3046	13	full-splice_match	PMS1	ENST00000441310.6	3225	13	69	110	0	83	multi-exon	FALSE	canonical	1	115835	junction_1	48270.7386075894	NA	0	NA	TRUE	NA	NA	NA	C	coding	932	2799	165	2963	25.0	-62	True	CATAAA	-33
PB.6900.7	chr2	+	3276	13	novel_in_catalog	PMS1	novel	2506	10	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	1	4356	junction_1	67178.36096722705	NA	2	NA	TRUE	NA	NA	NA	C	coding	932	2799	293	3091	30.0	-13	True	AATAAA	-10
PB.2044.1	chr11	+	1999	4	full-splice_match	MRPL49	ENST00000524482.5	2065	4	73	-7	-35	0	multi-exon	FALSE	canonical	1	15605	junction_1	327925.76624087756	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-65	False	ATTAAA	-36
PB.6900.1	chr2	+	2637	12	full-splice_match	PMS1	ENST00000447232.6	2576	12	-58	-3	-3	3	multi-exon	FALSE	canonical	1	6285	junction_9	68290.60777344214	NA	1	NA	TRUE	NA	NA	NA	C	coding	770	2313	129	2441	40.0	-26	True	AATAAA	-21
PB.8215.2	chr3	-	5291	19	full-splice_match	LRIG1	ENST00000273261.7	5273	19	-19	1	-19	0	multi-exon	FALSE	canonical	1	167683	junction_18	91302.59696737905	NA	2	NA	TRUE	NA	NA	NA	A	coding	1093	3282	545	3826	15.0	169	False	AATAAA	-19
PB.2044.2	chr11	+	2019	4	full-splice_match	MRPL49	ENST00000279242.6	2019	4	-8	8	1	0	multi-exon	FALSE	canonical	1	483296	junction_1	112896.26676142425	NA	0	NA	TRUE	NA	NA	NA	C	coding	166	501	28	528	35.0	-1	True	ATTAAA	-36
PB.459.4	chr1	+	3597	13	full-splice_match	MIER1	ENST00000355356.3	4818	13	-81	1302	-81	58	multi-exon	FALSE	canonical	1	110722	junction_1	73443.12895528796	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	231	1769	35.0	-1	True	AGTAAA	-17
PB.8762.3	chr4	+	3839	16	novel_in_catalog	GUF1	novel	3970	16	NA	NA	160	2	no_combination_of_known_junctions	FALSE	canonical	1	68925	junction_8	58267.73817458699	NA	0	NA	TRUE	NA	NA	NA	C	coding	261	786	147	932	25.0	-19	True	NA	NA
PB.6900.8	chr2	+	3023	12	full-splice_match	PMS1	ENST00000409823.7	2795	12	-25	-203	-13	10	multi-exon	FALSE	canonical	1	8980	junction_5	70903.26018696529	NA	0	NA	TRUE	NA	NA	NA	C	coding	893	2682	139	2820	50.0	-36	True	AATAAA	-28
PB.9074.7	chr4	+	3143	6	novel_not_in_catalog	SPCS3	novel	4571	5	NA	NA	-1	-692	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_5	393963.0081524914	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	169	657	30.0	-25	True	CATAAA	-19
PB.459.5	chr1	+	2606	14	full-splice_match	MIER1	ENST00000401042.7	1648	14	31	-989	31	-371	multi-exon	FALSE	canonical	1	2862	junction_13	110400.2957386057	NA	4	NA	TRUE	NA	NA	NA	C	coding	433	1302	119	1420	45.0	4	True	ATTAAA	-11
PB.981.18	chr1	+	6082	25	novel_in_catalog	SMG7	novel	1190	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8328	junction_1	154897.23534567805	NA	3	NA	TRUE	NA	NA	NA	C	coding	1149	3450	374	3823	20.0	-7	True	ATTAAA	-18
PB.981.19	chr1	+	5852	22	novel_in_catalog	SMG7	novel	1190	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26724	junction_3	126477.49722528463	NA	4	1	TRUE	NA	NA	NA	C	coding	802	2409	1189	3597	30.0	-7	True	ATTAAA	-14
PB.6307.8	chr2	+	2389	16	novel_not_in_catalog	TAF1B	novel	2387	15	NA	NA	7	-11	any annotated donor/acceptor	FALSE	canonical	1	420	junction_15	61744.45634257378	NA	1	NA	TRUE	NA	NA	NA	C	coding	535	1608	39	1646	30.0	10	True	NA	NA
PB.459.6	chr1	+	4337	13	full-splice_match	MIER1	ENST00000355356.3	4818	13	110	371	110	-371	multi-exon	FALSE	canonical	1	110722	junction_1	73443.12895528796	NA	1	NA	TRUE	NA	NA	NA	C	coding	512	1539	40	1578	45.0	0	True	ATTAAA	-11
PB.981.10	chr1	+	5948	23	novel_in_catalog	SMG7	novel	1190	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	79212	junction_18	128357.53502358393	NA	2	NA	TRUE	NA	NA	NA	C	coding	1187	3564	126	3689	20.0	-11	True	ATTAAA	-18
PB.9074.1	chr4	+	1969	5	full-splice_match	SPCS3	ENST00000503362.1	4571	5	-11	2613	-11	1226	multi-exon	FALSE	canonical	1	773051	junction_3	157657.44130075182	NA	1	NA	TRUE	NA	NA	NA	C	coding	162	489	179	667	60.0	-35	True	ATTAAA	-26
PB.981.12	chr1	+	2628	16	incomplete-splice_match	SMG7	ENST00000508461.5	3985	22	-3	6132	-3	2	3prime_fragment	FALSE	canonical	1	19346	junction_1	107830.48566782958	NA	0	NA	TRUE	NA	NA	NA	C	coding	803	2409	219	2627	55.0	-10	True	NA	NA
PB.459.7	chr1	+	4687	13	full-splice_match	MIER1	ENST00000355356.3	4818	13	128	3	128	-3	multi-exon	FALSE	canonical	1	110722	junction_1	73443.12895528796	NA	0	NA	TRUE	NA	NA	NA	C	coding	512	1539	22	1560	25.0	-10	True	AATAAA	-15
PB.981.14	chr1	+	5807	23	novel_in_catalog	SMG7	novel	1190	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	79212	junction_18	125678.90293107543	NA	1	NA	TRUE	NA	NA	NA	C	coding	1141	3426	123	3548	20.0	-8	True	ATTAAA	-18
PB.7656.3	chr22	+	2644	2	incomplete-splice_match	DDTL	ENST00000215770.5	1545	3	-13	2638	-13	-2638	3prime_fragment	FALSE	canonical	1	7359	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	112	339	28	366	15.0	NA	False	AATAAA	-39
PB.981.16	chr1	+	2582	17	novel_in_catalog	SMG7	novel	1190	8	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	26724	junction_3	114600.85532730547	NA	1	NA	TRUE	NA	NA	NA	C	coding	464	1392	1190	2581	55.0	-8	True	NA	NA
PB.1486.3	chr10	-	2520	2	full-splice_match	ZNF503	ENST00000372524.4	3347	2	498	329	-162	-329	multi-exon	FALSE	canonical	1	238132	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	568	1707	224	1930	85.0	-19	True	NA	NA
PB.8105.7	chr3	-	3377	11	novel_not_in_catalog	QRICH1	novel	3549	10	NA	NA	138	-4	intron_retention	FALSE	canonical	1	672	junction_10	248515.02981469754	NA	2	NA	TRUE	NA	NA	NA	C	coding	776	2331	306	2636	40.0	-1	True	NA	NA
PB.8105.6	chr3	-	3264	11	full-splice_match	QRICH1	ENST00000357496.6	3083	11	-9	-172	0	-53	multi-exon	FALSE	canonical	1	29165	junction_10	242822.3005665048	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	242	2572	20.0	-1	True	TATAAA	-21
PB.8105.5	chr3	-	3941	8	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	202258	junction_7	163600.05153484544	NA	6	1	TRUE	NA	NA	NA	C	coding	632	1899	175	2073	35.0	6	True	NA	NA
PB.8105.4	chr3	-	3610	10	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	0	-53	intron_retention	FALSE	canonical	1	29165	junction_9	254927.07307360775	NA	1	NA	TRUE	NA	NA	NA	C	coding	632	1899	242	2140	20.0	-1	True	TATAAA	-21
PB.8105.3	chr3	-	3204	10	full-splice_match	QRICH1	ENST00000395443.6	3549	10	292	53	0	-53	multi-exon	FALSE	canonical	1	202258	junction_9	158566.49555577466	NA	0	NA	TRUE	NA	NA	NA	C	coding	776	2331	182	2512	20.0	-1	True	TATAAA	-21
PB.8105.1	chr3	-	3550	9	novel_in_catalog	QRICH1	novel	3549	10	NA	NA	0	-53	intron_retention	FALSE	canonical	1	202258	junction_8	168183.4945139906	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	182	2080	20.0	-1	True	TATAAA	-21
PB.1514.2	chr10	-	2529	6	full-splice_match	NUTM2A-AS1	ENST00000446751.5	2394	6	225	-360	-57	360	multi-exon	FALSE	canonical	1	17233	junction_3	125732.87806234295	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	25.0	0	True	NA	NA
PB.1514.3	chr10	-	2281	6	full-splice_match	NUTM2A-AS1	ENST00000446751.5	2394	6	112	1	-15	-1	multi-exon	FALSE	canonical	1	17233	junction_3	125732.87806234295	NA	3	NA	TRUE	NA	NA	NA	C	coding	36	111	189	299	20.0	89	False	NA	NA
PB.3380.3	chr14	-	3259	5	novel_not_in_catalog	CFL2	novel	6747	4	NA	NA	18	-83	any annotated donor/acceptor	FALSE	canonical	1	4520	junction_4	468286.2735800613	NA	1	NA	TRUE	NA	NA	NA	C	coding	166	501	364	864	75.0	-1	True	NA	NA
PB.1514.1	chr10	-	6197	6	full-splice_match	NUTM2A-AS1	ENST00000446751.5	2394	6	170	-3973	43	-1492	multi-exon	FALSE	canonical	1	17233	junction_3	125732.87806234295	NA	2	NA	TRUE	NA	NA	NA	C	coding	104	315	1	315	15.0	147	False	NA	NA
PB.1514.6	chr10	-	2066	4	novel_in_catalog	NUTM2A-AS1	novel	662	6	NA	NA	-14	1190	combination_of_known_junctions	FALSE	canonical	1	2675	junction_1	147485.02235142386	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-37	False	AATAAA	-16
PB.1514.7	chr10	-	2179	3	novel_in_catalog	NUTM2A-AS1	novel	662	6	NA	NA	3	1059	combination_of_known_junctions	FALSE	canonical	1	29	junction_1	181521.0	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	75.0	107	False	NA	NA
PB.1514.4	chr10	-	2209	4	full-splice_match	NUTM2A-AS1	ENST00000413722.5	732	4	-91	-1386	-48	327	multi-exon	FALSE	canonical	1	17233	junction_1	141845.44096147595	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	9	True	NA	NA
PB.1514.5	chr10	-	2039	5	novel_in_catalog	NUTM2A-AS1	novel	662	6	NA	NA	-58	1196	combination_of_known_junctions	FALSE	canonical	1	2675	junction_1	148379.6583312551	NA	0	NA	TRUE	NA	NA	NA	C	coding	1	6	343	348	35.0	-1	True	AATAAA	-22
PB.7691.2	chr22	+	438	2	full-splice_match	UQCR10	ENST00000330029.6	916	2	20	458	15	-72	multi-exon	FALSE	canonical	1	2947658	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	5	True	AATAAA	-28
PB.8084.1	chr3	-	3418	15	full-splice_match	CDC25A	ENST00000302506.7	3783	15	333	32	-57	-32	multi-exon	FALSE	canonical	1	110393	junction_14	32794.78797167536	NA	0	NA	TRUE	NA	NA	NA	A	coding	524	1575	77	1651	10.0	393	False	AATAAA	-16
PB.7691.1	chr22	+	511	2	full-splice_match	UQCR10	ENST00000401406.3	584	2	-9	82	-4	-82	multi-exon	FALSE	canonical	1	487940	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-19	True	AATAAA	-18
PB.1228.1	chr1	+	3090	7	novel_in_catalog	CHRM3	novel	2005	9	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	1	12406	junction_1	3024.9347880941536	NA	1	NA	TRUE	NA	NA	NA	A	coding	590	1773	1127	2899	85.0	-341	False	AATAAA	-36
PB.11687.6	chr9	+	3623	18	novel_in_catalog	INVS	novel	3709	17	NA	NA	-11	27	intron_retention	FALSE	canonical	1	8393	junction_3	37151.57291337362	NA	2	NA	TRUE	NA	NA	NA	C	coding	958	2877	606	3482	50.0	2	True	NA	NA
PB.6353.6	chr2	-	3473	21	novel_not_in_catalog	ADCY3	novel	5050	21	NA	NA	-9156	0	any annotated donor/acceptor	FALSE	canonical	1	22683	junction_20	104715.73586906602	NA	0	NA	TRUE	NA	NA	NA	B	coding	857	2574	140	2713	35.0	-3	True	ATTAAA	-17
PB.841.41	chr1	+	2112	9	incomplete-splice_match	IFI16	ENST00000368132.7	2704	11	6019	-2	264	0	5prime_fragment	FALSE	canonical	1	295	junction_5	376468.19090144837	NA	0	NA	TRUE	NA	NA	NA	C	coding	571	1716	145	1860	20.0	-6	True	AATAAA	-26
PB.7068.8	chr2	-	2612	14	novel_in_catalog	NCL	novel	4034	14	NA	NA	2	159	combination_of_known_junctions	FALSE	canonical	1	55413	junction_13	2204101.297955992	NA	1	NA	TRUE	NA	NA	NA	C	coding	694	2085	86	2170	30.0	-13	True	ATTAAA	-19
PB.7068.9	chr2	-	2314	14	novel_not_in_catalog	NCL	novel	4034	14	NA	NA	100	159	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_12	2202564.652642683	NA	2	NA	TRUE	NA	NA	NA	C	coding	576	1731	142	1872	30.0	-11	True	ATTAAA	-19
PB.1566.1	chr10	+	4819	8	full-splice_match	LCOR	ENST00000371103.8	10342	8	-27	5550	-27	0	multi-exon	FALSE	canonical	1	51559	junction_2	43849.408765241344	NA	0	NA	TRUE	NA	NA	NA	C	coding	433	1302	549	1850	80.0	-43	True	NA	NA
PB.1566.3	chr10	+	4732	7	novel_in_catalog	LCOR	novel	10342	8	NA	NA	-14	0	intron_retention	FALSE	canonical	1	24348	junction_1	51026.57818779891	NA	0	NA	TRUE	NA	NA	NA	C	coding	575	1728	36	1763	80.0	-30	True	NA	NA
PB.1566.2	chr10	+	4680	7	novel_in_catalog	LCOR	novel	10342	8	NA	NA	-21	0	intron_retention	FALSE	canonical	1	18681	junction_4	55668.494931054935	NA	3	NA	TRUE	NA	NA	NA	C	coding	433	1302	410	1711	80.0	-37	True	NA	NA
PB.9184.1	chr5	+	3497	24	incomplete-splice_match	NIPBL	ENST00000448238.2	8729	46	139338	31	20378	-31	5prime_fragment	FALSE	canonical	1	257331	junction_15	48980.35961743552	NA	1	NA	TRUE	NA	NA	NA	B	coding	1095	3288	74	3361	75.0	7404	False	NA	NA
PB.1566.4	chr10	+	4862	9	novel_not_in_catalog	LCOR	novel	10342	8	NA	NA	-9	0	intron_retention	FALSE	canonical	1	8057	junction_3	60252.975265619665	NA	1	NA	TRUE	NA	NA	NA	C	coding	558	1677	217	1893	80.0	-25	True	NA	NA
PB.954.5	chr1	-	3698	18	novel_in_catalog	COP1	novel	2131	9	NA	NA	-187	0	intron_retention	FALSE	canonical	1	78940	junction_12	108341.4078992501	NA	1	NA	TRUE	NA	NA	NA	C	coding	596	1791	293	2083	25.0	-27	True	AATAAA	-37
PB.5907.2	chr19	-	3571	16	novel_not_in_catalog	RHPN2	novel	3793	12	NA	NA	-21	0	any annotated donor/acceptor	FALSE	canonical	1	1734	junction_15	65065.45537274155	NA	1	NA	TRUE	NA	NA	NA	C	coding	634	1905	264	2168	25.0	-22	False	AATAAA	-17
PB.9446.5	chr5	-	1931	4	full-splice_match	ZCCHC10	ENST00000324170.7	2178	4	56	191	1	-180	multi-exon	FALSE	canonical	1	83960	junction_3	60188.833130037965	NA	0	NA	TRUE	NA	NA	NA	C	coding	170	513	12	524	40.0	0	True	AATAAA	-19
PB.954.6	chr1	-	2858	21	novel_not_in_catalog	COP1	novel	2131	9	NA	NA	-160	0	any annotated donor/acceptor	FALSE	canonical	1	311	junction_3	129225.6449567964	NA	0	NA	TRUE	NA	NA	NA	C	coding	744	2235	266	2500	25.0	0	True	AATAAA	-37
PB.11531.1	chr9	-	2081	1	novel_in_catalog	HINT2	novel	2167	3	NA	NA	-21	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	127	384	1290	1673	15.0	-1	True	AATAAA	-14
PB.11327.7	chr8	-	3348	9	full-splice_match	FBXO32	ENST00000517956.5	6744	9	0	3396	0	1821	multi-exon	FALSE	canonical	1	310956	junction_8	53019.434111465205	NA	1	NA	TRUE	NA	NA	NA	C	coding	355	1068	193	1260	25.0	-1	True	AATAAA	-17
PB.2358.4	chr11	-	2137	7	full-splice_match	RPUSD4	ENST00000298317.8	2512	7	40	335	-6	-15	multi-exon	FALSE	canonical	1	200458	junction_2	58145.814508058575	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	15	1148	55.0	-3	True	NA	NA
PB.897.4	chr1	-	1164	7	full-splice_match	TMCO1	ENST00000392129.10	1946	7	34	748	8	-5	multi-exon	FALSE	canonical	1	1301367	junction_4	116281.40713038444	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	118	684	30.0	-1	True	AATAAA	-27
PB.5217.1	chr17	+	2117	1	antisense	novelGene_LINC00511_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	100.0	NA	False	NA	NA
PB.2358.1	chr11	-	3708	7	full-splice_match	RPUSD4	ENST00000298317.8	2512	7	39	-1235	-7	1235	multi-exon	FALSE	canonical	1	200458	junction_2	58145.814508058575	NA	1	NA	TRUE	NA	NA	NA	C	coding	377	1134	16	1149	25.0	-4	True	CATAAA	-13
PB.897.3	chr1	-	1419	7	full-splice_match	TMCO1	ENST00000392129.10	1946	7	16	511	2	0	multi-exon	FALSE	canonical	1	1301367	junction_4	116281.40713038444	NA	0	NA	TRUE	NA	NA	NA	C	coding	188	567	136	702	75.0	-19	True	TTTAAA	-34
PB.2358.3	chr11	-	5872	6	novel_in_catalog	RPUSD4	novel	2512	7	NA	NA	-2	-15	intron_retention	FALSE	canonical	1	200458	junction_2	56491.19121562228	NA	2	NA	TRUE	NA	NA	NA	C	coding	184	555	4329	4883	55.0	1	True	NA	NA
PB.2358.2	chr11	-	2488	7	full-splice_match	RPUSD4	ENST00000298317.8	2512	7	25	-1	-21	1	multi-exon	FALSE	canonical	1	200458	junction_2	58145.814508058575	NA	0	NA	TRUE	NA	NA	NA	C	coding	377	1134	30	1163	30.0	-18	True	AATAAA	-22
PB.6145.1	chr19	+	1484	12	novel_not_in_catalog	PRMT1	novel	1182	6	NA	NA	-14	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1191523.461738725	NA	1	NA	TRUE	NA	NA	NA	C	coding	347	1044	238	1281	0.0	-2	True	AATAAA	-14
PB.6145.3	chr19	+	1364	11	full-splice_match	PRMT1	ENST00000454376.6	1327	11	-37	0	-14	0	multi-exon	FALSE	canonical	1	274983	junction_2	1039823.7501375123	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	47	1162	0.0	-2	True	AATAAA	-13
PB.6145.2	chr19	+	1468	12	novel_not_in_catalog	PRMT1	novel	1182	6	NA	NA	-14	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	1193106.4811215985	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	238	1266	0.0	-2	True	AATAAA	-13
PB.6145.5	chr19	+	1283	10	full-splice_match	PRMT1	ENST00000391851.8	1393	10	110	0	-5	0	multi-exon	FALSE	canonical	1	1730537	junction_6	634669.4545425074	NA	0	NA	TRUE	NA	NA	NA	C	coding	353	1062	20	1081	0.0	-9	True	AATAAA	-13
PB.6145.4	chr19	+	2084	12	novel_not_in_catalog	PRMT1	novel	1182	6	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	1312300.8125461072	NA	0	NA	TRUE	NA	NA	NA	C	coding	293	882	238	1119	0.0	-2	True	AATAAA	-12
PB.2267.2	chr11	+	2382	15	novel_not_in_catalog	DDX10	novel	3264	18	NA	NA	-15	-2975	any annotated donor/acceptor	FALSE	canonical	1	1201	junction_11	57436.30092692571	NA	0	NA	TRUE	NA	NA	NA	C	coding	489	1470	101	1570	70.0	-15	True	AAGAAA	-24
PB.954.1	chr1	-	2722	19	novel_in_catalog	COP1	novel	2131	9	NA	NA	-202	-21	combination_of_known_junctions	FALSE	canonical	1	78940	junction_13	105303.15238561838	NA	7	3	TRUE	NA	NA	NA	C	coding	711	2136	308	2443	80.0	-42	True	NA	NA
PB.9391.1	chr5	+	3662	3	full-splice_match	SRP19	ENST00000515755.1	631	3	-44	-2987	-13	-29	multi-exon	FALSE	canonical	1	52271	junction_2	190668.5	NA	3	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	15.0	-23	True	AATAAA	-45
PB.4513.8	chr16	-	2820	3	novel_in_catalog	CHTF8	novel	2903	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	644	junction_2	284856.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	402	1976	5.0	8	True	AATAAA	-15
PB.4513.9	chr16	-	2772	3	full-splice_match	CHTF8	ENST00000520529.5	475	3	-11	-2286	-11	0	multi-exon	FALSE	canonical	1	66736	junction_2	42400.5	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	354	1928	5.0	-4	True	AATAAA	-15
PB.8119.4	chr3	-	3135	17	novel_not_in_catalog	MST1	novel	667	5	NA	NA	30	-1	intron_retention	FALSE	canonical	1	1729	junction_2	83280.01124444569	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	773	1792	20.0	-1	True	CATAAA	-25
PB.8119.5	chr3	-	3073	18	full-splice_match	MST1	ENST00000449682.2	2621	18	-453	1	-5	-1	multi-exon	FALSE	canonical	1	9896	junction_10	80411.31829029661	NA	0	NA	TRUE	NA	NA	NA	C	coding	725	2178	816	2993	20.0	-44	False	CATAAA	-25
PB.8119.6	chr3	-	3341	16	novel_in_catalog	MST1	novel	667	5	NA	NA	3	-9	intron_retention	FALSE	canonical	1	18799	junction_10	78110.76774723332	NA	1	NA	TRUE	NA	NA	NA	C	coding	339	1020	800	1819	20.0	-28	False	CATAAA	-17
PB.8119.7	chr3	-	3158	17	novel_not_in_catalog	MST1	novel	667	5	NA	NA	4	-10	intron_retention	FALSE	canonical	1	2489	junction_5	85700.70990788142	NA	37	5	TRUE	NA	NA	NA	C	coding	339	1020	799	1818	20.0	-27	False	CATAAA	-16
PB.4513.2	chr16	-	3578	2	novel_in_catalog	CHTF8	novel	2903	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	379313	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	524	1575	1160	2734	5.0	-8	True	AATAAA	-15
PB.4513.3	chr16	-	2912	4	full-splice_match	CHTF8	ENST00000448552.6	2903	4	-11	2	-3	-2	multi-exon	FALSE	canonical	1	336818	junction_2	101567.30134250884	NA	4	NA	TRUE	NA	NA	NA	C	coding	121	366	134	499	5.0	-12	True	AATAAA	-13
PB.10878.28	chr7	+	4376	11	novel_in_catalog	LUC7L2	novel	1525	11	NA	NA	8	0	intron_retention	FALSE	canonical	1	4252	junction_1	475725.620881081	NA	0	NA	TRUE	NA	NA	NA	C	coding	339	1020	2240	3259	30.0	-36	True	AATAAA	-22
PB.4513.1	chr16	-	2747	2	full-splice_match	CHTF8	ENST00000567763.1	734	2	-16	-1997	-4	2	multi-exon	FALSE	canonical	1	13431	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	327	1901	5.0	-19	True	AATAAA	-17
PB.4513.6	chr16	-	2792	3	full-splice_match	CHTF8	ENST00000519520.5	856	3	7	-1943	1	0	multi-exon	FALSE	canonical	1	151537	junction_1	113888.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	374	1948	5.0	-8	True	AATAAA	-15
PB.4513.7	chr16	-	2863	3	full-splice_match	CHTF8	ENST00000522497.1	831	3	-15	-2017	-4	0	multi-exon	FALSE	canonical	1	11120	junction_2	279618.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	524	1575	445	2019	5.0	-19	True	AATAAA	-15
PB.4513.4	chr16	-	3014	5	novel_not_in_catalog	CHTF8	novel	2903	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	1528	junction_3	240617.49255444313	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	234	599	5.0	-14	True	AATAAA	-15
PB.4513.5	chr16	-	2899	4	full-splice_match	CHTF8	ENST00000398235.6	1073	4	-25	-1801	-20	0	multi-exon	FALSE	canonical	1	66736	junction_3	205782.35227432783	NA	0	NA	TRUE	NA	NA	NA	C	coding	121	366	119	484	5.0	398	False	AATAAA	-15
PB.8913.2	chr4	-	1204	12	full-splice_match	PPA2	ENST00000341695.9	1684	12	-12	492	-12	-4	multi-exon	FALSE	canonical	1	580661	junction_11	142789.22712061467	NA	0	NA	TRUE	NA	NA	NA	C	coding	334	1005	44	1048	25.0	-35	False	AATAAA	-13
PB.8913.3	chr4	-	3195	8	full-splice_match	PPA2	ENST00000457404.6	778	8	0	-2417	0	2216	multi-exon	FALSE	canonical	1	20426	junction_1	327138.5102885882	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	13	858	35.0	-4	True	ATTAAA	-17
PB.9391.2	chr5	+	3037	5	full-splice_match	SRP19	ENST00000505459.5	2841	5	65	-261	-8	261	multi-exon	FALSE	canonical	1	52271	junction_2	246249.19891176804	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	91	525	30.0	-18	True	NA	NA
PB.8913.6	chr4	-	2923	9	novel_not_in_catalog	PPA2	novel	1684	12	NA	NA	-8	4793	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	393192.1657443525	NA	1	NA	TRUE	NA	NA	NA	C	coding	221	666	40	705	30.0	-31	False	AATAAA	-42
PB.8913.7	chr4	-	4542	1	novel_in_catalog	PPA2	novel	1684	12	NA	NA	2	3820	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-21	True	AAAACA	-44
PB.8913.4	chr4	-	2698	8	full-splice_match	PPA2	ENST00000457404.6	778	8	1	-1921	1	1720	multi-exon	FALSE	canonical	1	20426	junction_1	327138.5102885882	NA	0	NA	TRUE	NA	NA	NA	C	coding	281	846	12	857	80.0	-3	True	NA	NA
PB.8913.5	chr4	-	2508	8	full-splice_match	PPA2	ENST00000457404.6	778	8	-6	-1724	-1	1523	multi-exon	FALSE	canonical	1	20426	junction_1	327138.5102885882	NA	2	NA	TRUE	NA	NA	NA	C	coding	281	846	19	864	35.0	-10	True	ATTAAA	-20
PB.8913.8	chr4	-	4432	2	novel_not_in_catalog	PPA2	novel	1684	12	NA	NA	-8	3809	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	157	474	40	513	35.0	-31	False	AATAAA	-36
PB.10999.40	chr8	+	1929	9	novel_in_catalog	PCM1	novel	6820	39	NA	NA	4	-62	combination_of_known_junctions	FALSE	canonical	1	30514	junction_1	170468.28106603696	NA	0	NA	TRUE	NA	NA	NA	C	coding	491	1476	218	1693	60.0	1	True	AATAAA	-6
PB.841.1	chr1	+	3067	12	novel_in_catalog	IFI16	novel	856	3	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	1	295	junction_8	418958.1160359944	NA	0	NA	TRUE	NA	NA	NA	C	coding	729	2190	626	2815	20.0	0	True	AATAAA	-26
PB.9391.4	chr5	+	891	5	full-splice_match	SRP19	ENST00000505459.5	2841	5	67	1883	-6	-30	multi-exon	FALSE	canonical	1	52271	junction_2	246249.19891176804	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	89	523	10.0	-16	True	AATAAA	-44
PB.384.1	chr1	-	2824	21	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	5	0	intron_retention	FALSE	canonical	1	213371	junction_20	136508.07797214788	NA	0	NA	TRUE	NA	NA	NA	C	coding	632	1899	154	2052	15.0	-5	True	ATTAAA	-21
PB.3201.8	chr13	-	3515	5	full-splice_match	FBXL3	ENST00000355619.9	3503	5	-20	8	-20	-8	multi-exon	FALSE	canonical	1	170246	junction_4	94578.17642927727	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	346	1632	15.0	-12	True	AATAAA	-13
PB.384.3	chr1	-	3213	19	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	5	0	intron_retention	FALSE	canonical	1	213371	junction_18	140037.38659734916	NA	0	NA	TRUE	NA	NA	NA	C	coding	299	900	1543	2442	15.0	-5	True	ATTAAA	-20
PB.384.2	chr1	-	2508	23	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	4939	junction_22	195145.59055097727	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	199	2181	15.0	-1	True	ATTAAA	-21
PB.384.5	chr1	-	2717	22	full-splice_match	POMGNT1	ENST00000371984.7	2728	22	11	0	11	0	multi-exon	FALSE	canonical	1	213371	junction_21	133236.20734339333	NA	0	NA	TRUE	NA	NA	NA	C	coding	660	1983	148	2130	15.0	1	True	ATTAAA	-20
PB.384.4	chr1	-	3107	20	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	11	0	intron_retention	FALSE	canonical	1	213371	junction_19	136302.44047174658	NA	0	NA	TRUE	NA	NA	NA	C	coding	327	984	1537	2520	15.0	1	True	ATTAAA	-20
PB.384.7	chr1	-	2346	22	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	33231	junction_1	175170.48237491475	NA	0	NA	TRUE	NA	NA	NA	C	coding	718	2157	154	2310	15.0	-5	True	ATTAAA	-20
PB.384.6	chr1	-	2463	23	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	18933	junction_1	173120.95200053722	NA	1	NA	TRUE	NA	NA	NA	C	coding	660	1983	155	2137	15.0	-6	True	ATTAAA	-20
PB.3201.1	chr13	-	2303	5	novel_in_catalog	FBXL3	novel	527	2	NA	NA	10	-1613	combination_of_known_junctions	FALSE	canonical	1	22572	junction_1	141363.47225326634	NA	1	1	TRUE	NA	NA	NA	C	coding	227	684	361	1044	30.0	0	True	AATAAA	-15
PB.384.8	chr1	-	2030	1	novel_in_catalog	POMGNT1	novel	3480	19	NA	NA	260	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	100	303	677	979	15.0	7721	False	ATTAAA	-20
PB.3201.2	chr13	-	3189	4	novel_in_catalog	FBXL3	novel	527	2	NA	NA	9	-1	no_combination_of_known_junctions	FALSE	canonical	1	34578	junction_3	172267.24957912214	NA	0	NA	TRUE	NA	NA	NA	C	coding	276	831	469	1299	40.0	-1	True	AATAAA	-20
PB.3201.5	chr13	-	3357	5	novel_not_in_catalog	FBXL3	novel	527	2	NA	NA	-1	-7	any annotated donor/acceptor	FALSE	canonical	1	11910	junction_4	158807.35293016976	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	187	1473	20.0	-1	True	AATAAA	-14
PB.3201.4	chr13	-	3453	6	novel_not_in_catalog	FBXL3	novel	527	2	NA	NA	-13	-7	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	152242.36197248122	NA	0	NA	TRUE	NA	NA	NA	C	coding	428	1287	283	1569	20.0	-5	True	AATAAA	-14
PB.3201.7	chr13	-	2887	4	novel_not_in_catalog	FBXL3	novel	527	2	NA	NA	-14	-7	any annotated donor/acceptor	FALSE	canonical	1	630	junction_3	188270.28905686515	NA	1	NA	TRUE	NA	NA	NA	C	coding	276	831	173	1003	20.0	-6	True	AATAAA	-14
PB.3201.6	chr13	-	3398	5	full-splice_match	FBXL3	ENST00000417323.1	1093	5	-1	-2304	-1	-7	multi-exon	FALSE	canonical	1	6605	junction_3	166188.6473670434	NA	0	NA	TRUE	NA	NA	NA	C	coding	380	1143	372	1514	20.0	-1	True	AATAAA	-14
PB.6544.12	chr2	+	5204	24	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	-1	8303	1	152	3prime_fragment	FALSE	canonical	1	110631	junction_1	95001.3521627381	NA	0	NA	TRUE	NA	NA	NA	C	coding	1629	4887	316	5202	55.0	-19	True	NA	NA
PB.8974.2	chr4	+	3136	16	full-splice_match	INTU	ENST00000335251.10	13233	16	13	10084	-12	-122	multi-exon	FALSE	canonical	1	14650	junction_7	14245.498787570292	NA	1	NA	TRUE	NA	NA	NA	C	coding	942	2829	91	2919	40.0	-12	True	ATTAAA	-6
PB.12273.9	chrX	+	4341	10	novel_in_catalog	PHF6	novel	4489	11	NA	NA	-13	0	no_combination_of_known_junctions	FALSE	canonical	1	13247	junction_2	114770.92462115597	NA	1	NA	TRUE	NA	NA	NA	C	coding	331	996	216	1211	5.0	-13	True	AATAAA	-17
PB.12273.8	chrX	+	4540	1	novel_in_catalog	PHF6	novel	4489	11	NA	NA	-20	-37461	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	116	351	1006	1356	80.0	4	True	NA	NA
PB.6544.16	chr2	+	6385	27	novel_in_catalog	ZNF638	novel	871	5	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	1	20289	junction_24	174105.05904383791	NA	6	1	TRUE	NA	NA	NA	C	coding	1943	5832	306	6137	15.0	-9	True	AATAAA	-22
PB.6544.17	chr2	+	3593	21	incomplete-splice_match	ZNF638	ENST00000264447.8	6505	28	10	16432	8	-7977	3prime_fragment	FALSE	canonical	1	110631	junction_1	87489.74811740803	NA	4	NA	TRUE	NA	NA	NA	C	coding	1096	3288	305	3592	45.0	-8	True	NA	NA
PB.6544.14	chr2	+	2552	8	novel_in_catalog	ZNF638	novel	871	5	NA	NA	1	4284	combination_of_known_junctions	FALSE	canonical	1	156330	junction_1	98791.4217964871	NA	2	NA	TRUE	NA	NA	NA	C	coding	749	2247	304	2550	65.0	-17	True	GATAAA	-31
PB.6544.15	chr2	+	6367	27	novel_in_catalog	ZNF638	novel	871	5	NA	NA	0	-1	no_combination_of_known_junctions	FALSE	canonical	1	5052	junction_19	186285.31081796112	NA	3	1	TRUE	NA	NA	NA	C	coding	1936	5811	313	6123	30.0	-16	True	AATAAA	-18
PB.12273.3	chrX	+	4170	10	full-splice_match	PHF6	ENST00000332070.7	4759	10	-24	613	-24	-613	multi-exon	FALSE	canonical	1	257990	junction_8	58299.367839996434	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	227	1324	35.0	0	True	ATTAAA	-22
PB.12273.2	chrX	+	4733	10	full-splice_match	PHF6	ENST00000332070.7	4759	10	26	0	18	0	multi-exon	FALSE	canonical	1	257990	junction_8	58299.367839996434	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	177	1274	10.0	26	True	AATAAA	-16
PB.12273.1	chrX	+	3993	11	novel_not_in_catalog	PHF6	novel	4489	11	NA	NA	-5	0	any annotated donor/acceptor	FALSE	canonical	1	1879	junction_10	110979.48865934642	NA	1	NA	TRUE	NA	NA	NA	C	coding	365	1098	267	1364	5.0	-250	False	AATAAA	-17
PB.6544.19	chr2	+	4967	27	novel_not_in_catalog	ZNF638	novel	871	5	NA	NA	8	1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	178908.46757975212	NA	0	NA	TRUE	NA	NA	NA	C	coding	1467	4404	312	4715	10.0	-8	True	AATAAA	-26
PB.12273.7	chrX	+	4678	9	novel_in_catalog	PHF6	novel	4489	11	NA	NA	-21	0	intron_retention	FALSE	canonical	1	13247	junction_2	120546.26505490537	NA	0	NA	TRUE	NA	NA	NA	C	coding	331	996	224	1219	10.0	3	True	AATAAA	-16
PB.12273.6	chrX	+	3576	5	incomplete-splice_match	PHF6	ENST00000370800.4	1150	8	-84	18407	-23	-18407	3prime_fragment	FALSE	canonical	1	269853	junction_1	73363.61590521217	NA	2	NA	TRUE	NA	NA	NA	C	coding	156	471	226	696	90.0	1	True	NA	NA
PB.12273.5	chrX	+	3708	11	full-splice_match	PHF6	ENST00000370803.7	4489	11	36	745	-23	-744	multi-exon	FALSE	canonical	1	238679	junction_10	60768.116303617644	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	226	1323	40.0	1	True	NA	NA
PB.12273.4	chrX	+	3839	11	full-splice_match	PHF6	ENST00000370803.7	4489	11	35	615	-24	-614	multi-exon	FALSE	canonical	1	238679	junction_10	60768.116303617644	NA	0	NA	TRUE	NA	NA	NA	C	coding	365	1098	227	1324	30.0	0	True	ATTAAA	-21
PB.887.1	chr1	+	3137	11	novel_not_in_catalog	UAP1	novel	2377	11	NA	NA	-23	745	any annotated donor/acceptor	FALSE	canonical	1	1824	junction_1	187537.01812359606	NA	1	1	TRUE	NA	NA	NA	C	coding	522	1569	345	1913	45.0	2	True	AATAAA	-15
PB.887.3	chr1	+	2854	10	full-splice_match	UAP1	ENST00000367926.8	2294	10	190	-750	190	745	multi-exon	FALSE	canonical	1	217392	junction_8	141997.7034023986	NA	1	NA	TRUE	NA	NA	NA	C	coding	505	1518	113	1630	45.0	1	True	AATAAA	-15
PB.887.2	chr1	+	2461	12	novel_not_in_catalog	UAP1	novel	2377	11	NA	NA	-4	-3	any annotated donor/acceptor	FALSE	canonical	1	6499	junction_1	211465.02933070215	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	422	1990	20.0	-2	True	AATAAA	-18
PB.887.5	chr1	+	2155	11	full-splice_match	UAP1	ENST00000271469.7	2377	11	216	6	189	-1	multi-exon	FALSE	canonical	1	294175	junction_5	118188.02777675918	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	114	1682	25.0	0	True	AATAAA	-20
PB.7392.2	chr20	-	4942	2	novel_not_in_catalog	AL162457.2	novel	937	2	NA	NA	-14	-10475	any annotated donor/acceptor	FALSE	canonical	1	807	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	B	non_coding	NA	NA	NA	NA	30.0	-12	True	NA	NA
PB.887.7	chr1	+	2906	11	full-splice_match	UAP1	ENST00000271469.7	2377	11	216	-745	189	745	multi-exon	FALSE	canonical	1	294175	junction_5	118188.02777675918	NA	0	NA	TRUE	NA	NA	NA	C	coding	522	1569	114	1682	45.0	0	True	AATAAA	-15
PB.887.6	chr1	+	2104	10	full-splice_match	UAP1	ENST00000367926.8	2294	10	189	1	189	-1	multi-exon	FALSE	canonical	1	217392	junction_8	141997.7034023986	NA	0	NA	TRUE	NA	NA	NA	C	coding	505	1518	114	1631	25.0	0	True	AATAAA	-20
PB.9236.5	chr5	-	2110	3	intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	106	junction_2	489.5	NA	0	NA	FALSE	NA	NA	NA	A	non_coding	NA	NA	NA	NA	15.0	0	True	AATAAA	-35
PB.841.9	chr1	+	2570	11	novel_in_catalog	IFI16	novel	856	3	NA	NA	111	-1	combination_of_known_junctions	FALSE	canonical	1	32640	junction_1	396223.42646991485	NA	0	NA	TRUE	NA	NA	NA	C	coding	673	2022	300	2321	25.0	-9201	False	AATAAA	-23
PB.4135.1	chr16	+	5874	40	novel_in_catalog	WDR90	novel	5498	26	NA	NA	17	-2	intron_retention	TRUE	canonical	1	37138	junction_7	51731.74531731246	NA	0	NA	TRUE	NA	NA	NA	A	coding	1862	5589	48	5636	15.0	-28	True	AATAAA	-15
PB.8242.4	chr3	+	3776	7	novel_in_catalog	ZNF654	novel	1377	7	NA	NA	-56	-2386	no_combination_of_known_junctions	FALSE	canonical	1	10244	junction_3	27712.29195030409	NA	2	NA	TRUE	NA	NA	NA	C	coding	1015	3048	103	3150	80.0	-48	False	AATGAA	-17
PB.6307.6	chr2	+	1762	12	incomplete-splice_match	TAF1B	ENST00000263663.9	2387	15	138	20726	-5	-19	3prime_fragment	FALSE	canonical	1	106270	junction_1	34077.27181321012	NA	0	NA	TRUE	NA	NA	NA	C	coding	444	1335	51	1385	70.0	-2	True	AATAAA	-11
PB.3898.5	chr15	-	3689	21	full-splice_match	SLTM	ENST00000380516.6	4147	21	74	384	0	0	multi-exon	FALSE	canonical	1	238674	junction_15	181588.8615448302	NA	0	NA	TRUE	NA	NA	NA	C	coding	1034	3105	15	3119	35.0	19	True	AATAAA	-17
PB.3898.7	chr15	-	1894	14	incomplete-splice_match	SLTM	ENST00000380516.6	4147	21	-30	13974	-30	907	3prime_fragment	FALSE	canonical	1	238674	junction_8	166184.0868766253	NA	0	NA	TRUE	NA	NA	NA	C	coding	592	1776	119	1894	70.0	-5	True	NA	NA
PB.3898.6	chr15	-	3703	21	novel_in_catalog	SLTM	novel	4147	21	NA	NA	10	0	intron_retention	FALSE	canonical	1	108875	junction_15	198976.38988367442	NA	0	NA	TRUE	NA	NA	NA	C	coding	1016	3051	79	3129	30.0	347	False	AATAAA	-21
PB.3898.1	chr15	-	4092	21	full-splice_match	SLTM	ENST00000380516.6	4147	21	54	1	0	-1	multi-exon	FALSE	canonical	1	238674	junction_15	181588.8615448302	NA	4	NA	TRUE	NA	NA	NA	C	coding	1034	3105	35	3139	10.0	-1	True	AATAAA	-20
PB.3898.3	chr15	-	3692	20	novel_in_catalog	SLTM	novel	4147	21	NA	NA	-22	-8	intron_retention	FALSE	canonical	1	72280	junction_14	209023.4181186537	NA	0	NA	TRUE	NA	NA	NA	C	coding	603	1812	935	2746	15.0	3	True	AATAAA	-13
PB.3898.2	chr15	-	3905	20	novel_in_catalog	SLTM	novel	4147	21	NA	NA	0	-7	intron_retention	FALSE	canonical	1	74346	junction_6	231136.4951649713	NA	0	NA	TRUE	NA	NA	NA	C	coding	665	1998	35	2032	15.0	-1	True	AATAAA	-14
PB.6363.6	chr2	-	2568	19	full-splice_match	HADHA	ENST00000646483.1	2158	19	-30	-380	0	11	multi-exon	FALSE	canonical	1	10039	junction_16	455980.5269213367	NA	0	NA	TRUE	NA	NA	NA	C	coding	671	2016	173	2188	10.0	-17	True	AATAAA	-20
PB.6363.5	chr2	-	2622	21	novel_not_in_catalog	HADHA	novel	3037	20	NA	NA	-4	11	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	436426.95874511474	NA	2	1	TRUE	NA	NA	NA	C	coding	763	2292	35	2326	10.0	-21	True	AATAAA	-20
PB.6363.4	chr2	-	2776	19	full-splice_match	HADHA	ENST00000492433.2	2982	19	-12	218	0	8	multi-exon	FALSE	canonical	1	429272	junction_6	379681.886447538	NA	0	NA	TRUE	NA	NA	NA	C	coding	792	2379	21	2399	10.0	-7	True	AATAAA	-17
PB.3898.9	chr15	-	1614	12	novel_in_catalog	SLTM	novel	4147	21	NA	NA	-26	11	combination_of_known_junctions	FALSE	canonical	1	108875	junction_6	173277.11224628953	NA	0	NA	TRUE	NA	NA	NA	C	coding	500	1500	115	1614	65.0	-1	True	AAAAAG	-15
PB.3898.8	chr15	-	1665	12	incomplete-splice_match	SLTM	ENST00000380516.6	4147	21	-23	14870	-23	11	3prime_fragment	FALSE	canonical	1	238674	junction_6	141806.29856898004	NA	1	NA	TRUE	NA	NA	NA	C	coding	518	1554	112	1665	65.0	2	True	AAAAAG	-15
PB.6363.1	chr2	-	2936	20	full-splice_match	HADHA	ENST00000380649.7	3037	20	100	1	0	-1	multi-exon	FALSE	canonical	1	429272	junction_7	396280.2990494554	NA	0	NA	TRUE	NA	NA	NA	C	coding	763	2292	31	2322	15.0	-17	True	ATTAAA	-19
PB.10994.12	chr8	+	2094	13	novel_in_catalog	VPS37A	novel	4906	12	NA	NA	20	277	combination_of_known_junctions	FALSE	canonical	1	8581	junction_1	112959.63449942222	NA	1	NA	TRUE	NA	NA	NA	C	coding	290	873	654	1526	30.0	0	True	AATAAA	-12
PB.8194.1	chr3	-	3919	22	novel_not_in_catalog	DENND6A	novel	4655	20	NA	NA	-1	2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	63162.16599237294	NA	2	1	TRUE	NA	NA	NA	B	coding	542	1629	510	2138	20.0	-14	True	ATTAAA	-19
PB.8902.9	chr4	+	2439	1	novel_in_catalog	NFKB1	novel	4085	24	NA	NA	-7249	-5130	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-8932	False	NA	NA
PB.8902.4	chr4	+	3638	24	full-splice_match	NFKB1	ENST00000505458.5	3707	24	50	19	50	0	multi-exon	FALSE	non_canonical	0	0	junction_1	168910.37582075666	NA	0	NA	TRUE	NA	NA	NA	C	coding	968	2907	228	3134	100.0	0	True	AAAAAG	-41
PB.8902.5	chr4	+	3376	22	incomplete-splice_match	NFKB1	ENST00000505458.5	3707	24	27934	19	-7755	0	5prime_fragment	FALSE	canonical	1	197555	junction_1	128820.5610028126	NA	0	NA	TRUE	NA	NA	NA	C	coding	955	2868	5	2872	100.0	-6079	False	AAAAAG	-41
PB.10605.1	chr7	+	5494	16	full-splice_match	CLIP2	ENST00000361545.9	5445	16	-37	-12	-37	-1	multi-exon	FALSE	canonical	1	198368	junction_2	70411.50681857491	NA	0	NA	TRUE	NA	NA	NA	C	coding	1011	3036	365	3400	5.0	1	True	AATAAA	-27
PB.8194.3	chr3	-	3683	21	novel_not_in_catalog	DENND6A	novel	4655	20	NA	NA	-14	2	any annotated donor/acceptor	FALSE	canonical	1	6284	junction_1	54544.342313272966	NA	2	NA	TRUE	NA	NA	NA	B	coding	608	1827	86	1912	20.0	-27	True	ATTAAA	-19
PB.10605.4	chr7	+	2774	7	novel_in_catalog	CLIP2	novel	5445	16	NA	NA	102	4	no_combination_of_known_junctions	FALSE	canonical	1	1913	junction_1	138869.65606479897	NA	1	1	TRUE	NA	NA	NA	C	coding	199	600	89	688	10.0	NA	False	AATAAA	-19
PB.7398.1	chr20	+	1419	10	full-splice_match	ADRM1	ENST00000253003.6	1478	10	58	1	58	-1	multi-exon	FALSE	canonical	1	1051680	junction_5	436184.1074988212	NA	0	NA	TRUE	NA	NA	NA	A	coding	407	1224	98	1321	15.0	-43	True	AATAAA	-19
PB.10784.8	chr7	-	2947	10	novel_not_in_catalog	PNPLA8	novel	4268	10	NA	NA	-12	-190	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	125084.19574218454	NA	1	1	TRUE	NA	NA	NA	C	coding	563	1692	237	1928	60.0	-1	True	ATTAAA	-19
PB.10784.9	chr7	-	2909	9	novel_not_in_catalog	PNPLA8	novel	4268	10	NA	NA	-20	-190	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_2	132070.68820042687	NA	2	1	TRUE	NA	NA	NA	C	coding	563	1692	199	1890	60.0	-9	True	ATTAAA	-19
PB.10784.2	chr7	-	3371	11	full-splice_match	PNPLA8	ENST00000257694.12	3490	11	23	96	-8	10	multi-exon	FALSE	canonical	1	114536	junction_9	89421.30640093556	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	273	2621	65.0	2006	False	TATAAA	-37
PB.10784.3	chr7	-	3204	10	full-splice_match	PNPLA8	ENST00000436062.5	3462	10	268	-10	21	10	multi-exon	FALSE	canonical	1	75667	junction_9	90543.9020055744	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	106	2454	65.0	-1	True	TATAAA	-37
PB.10784.1	chr7	-	3755	11	full-splice_match	PNPLA8	ENST00000257694.12	3490	11	56	-321	-15	321	multi-exon	FALSE	canonical	1	114536	junction_9	89421.30640093556	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	240	2588	100.0	-4	True	NA	NA
PB.10784.6	chr7	-	3100	11	full-splice_match	PNPLA8	ENST00000257694.12	3490	11	94	296	20	-190	multi-exon	FALSE	canonical	1	114536	junction_9	89421.30640093556	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	202	2550	60.0	34	True	ATTAAA	-19
PB.10784.7	chr7	-	3039	11	novel_in_catalog	PNPLA8	novel	4268	10	NA	NA	-3	-190	combination_of_known_junctions	FALSE	canonical	1	14180	junction_9	110205.5461847996	NA	2	NA	TRUE	NA	NA	NA	C	coding	810	2433	57	2489	60.0	-32	True	ATTAAA	-19
PB.10784.4	chr7	-	3269	11	novel_in_catalog	PNPLA8	novel	4268	10	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	1	14180	junction_9	110205.5461847996	NA	0	NA	TRUE	NA	NA	NA	C	coding	810	2433	62	2494	30.0	2006	False	AATAAA	-14
PB.10784.5	chr7	-	3139	10	full-splice_match	PNPLA8	ENST00000436062.5	3462	10	133	190	9	-190	multi-exon	FALSE	canonical	1	75667	junction_9	90543.9020055744	NA	0	NA	TRUE	NA	NA	NA	C	coding	782	2349	241	2589	60.0	1992	False	ATTAAA	-19
PB.12192.9	chrX	+	3838	5	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	1	113572	intron_retention	TRUE	canonical	1	9011	junction_2	40396.065693332064	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	977	3493	25.0	-3	True	AATAAA	-19
PB.12192.8	chrX	+	2962	5	incomplete-splice_match	ARMCX5-GPRASP2	ENST00000466616.5	964	6	-6	8428	0	1210	3prime_fragment	FALSE	canonical	1	26541	junction_3	39341.14145760771	NA	2	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-6	True	NA	NA
PB.11133.1	chr8	+	1125	5	full-splice_match	MRPL15	ENST00000260102.8	1147	5	20	2	20	-2	multi-exon	FALSE	canonical	1	609776	junction_3	181863.3744201949	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	55	945	15.0	-11	True	ATTAAA	-28
PB.11133.2	chr8	+	2805	5	full-splice_match	MRPL15	ENST00000260102.8	1147	5	27	-1685	27	1685	multi-exon	FALSE	canonical	1	609776	junction_3	181863.3744201949	NA	0	NA	TRUE	NA	NA	NA	C	coding	296	891	48	938	35.0	-4	True	AATAAA	-18
PB.12192.3	chrX	+	2530	4	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	8292	junction_2	54072.98514045623	NA	0	NA	TRUE	NA	NA	NA	C	coding	558	1677	518	2194	30.0	-14	True	AATAAA	-20
PB.12192.2	chrX	+	3084	6	full-splice_match	ARMCX5-GPRASP2	ENST00000476910.6	1848	6	-25	-1211	0	1211	multi-exon	FALSE	canonical	1	26541	junction_4	37148.89509204816	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-14	True	NA	NA
PB.12192.1	chrX	+	2914	6	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	-13	2	no_combination_of_known_junctions	FALSE	canonical	1	4561	junction_1	44121.63365787808	NA	1	1	TRUE	NA	NA	NA	C	coding	558	1677	901	2577	30.0	-371	False	AATAAA	-21
PB.11215.5	chr8	-	3167	1	novel_in_catalog	C8orf59	novel	491	4	NA	NA	3	-85	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	85.0	-38	False	NA	NA
PB.12192.7	chrX	+	2624	5	incomplete-splice_match	ARMCX5	ENST00000246174.6	2899	6	351	5	-1	1	5prime_fragment	FALSE	canonical	1	43080	junction_1	37962.375948924746	NA	1	1	TRUE	NA	NA	NA	C	coding	558	1677	612	2288	30.0	-7	True	AATAAA	-20
PB.12192.6	chrX	+	2513	6	full-splice_match	ARMCX5-GPRASP2	ENST00000476910.6	1848	6	-20	-645	-3	645	multi-exon	FALSE	canonical	1	26541	junction_4	37148.89509204816	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	20.0	-9	True	NA	NA
PB.12192.5	chrX	+	2516	4	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	43080	junction_1	39461.57452791541	NA	2	1	TRUE	NA	NA	NA	C	coding	558	1677	505	2181	30.0	-13	True	AATAAA	-19
PB.12192.4	chrX	+	2256	3	novel_in_catalog	ARMCX5	novel	2899	6	NA	NA	2	36988	intron_retention	FALSE	canonical	1	23909	junction_1	23038.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	-14	True	NA	NA
PB.2131.1	chr11	-	2493	5	full-splice_match	LTO1	ENST00000279147.8	2478	5	-18	3	-15	0	multi-exon	FALSE	canonical	1	107963	junction_4	21740.060537806698	NA	0	NA	TRUE	NA	NA	NA	C	coding	137	414	127	540	35.0	15	False	NA	NA
PB.2131.2	chr11	-	2356	4	full-splice_match	LTO1	ENST00000543562.1	444	4	10	-1922	4	-6	multi-exon	FALSE	canonical	1	8585	junction_3	60311.952552265015	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	40.0	6	True	NA	NA
PB.2131.3	chr11	-	1653	1	novel_in_catalog	LTO1	novel	775	3	NA	NA	-12	-488	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	177	534	124	657	100.0	-16	True	NA	NA
PB.11339.1	chr8	-	5331	2	full-splice_match	FAM84B	ENST00000304916.3	5404	2	75	-2	75	2	multi-exon	FALSE	canonical	1	132863	junction_1	0.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	310	933	382	1314	25.0	-2	True	AATAAA	-21
PB.11339.2	chr8	-	2593	3	novel_in_catalog	FAM84B	novel	5404	2	NA	NA	-46	-96	intron_retention	FALSE	canonical	1	41943	junction_1	45460.0	NA	1	NA	TRUE	NA	NA	NA	C	coding	310	933	503	1435	15.0	-2	True	AATAAA	-24
PB.11339.5	chr8	-	5228	2	full-splice_match	FAM84B	ENST00000304916.3	5404	2	80	96	80	-96	multi-exon	FALSE	canonical	1	132863	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	377	1309	15.0	3	True	AATAAA	-24
PB.11339.7	chr8	-	4944	2	full-splice_match	FAM84B	ENST00000304916.3	5404	2	-49	509	-49	-136	multi-exon	FALSE	canonical	1	132863	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	310	933	506	1438	30.0	-5	True	AATAAA	-19
PB.2701.3	chr12	-	2670	1	novel_in_catalog	DDIT3	novel	940	4	NA	NA	3	-892	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	90.0	-4	True	NA	NA
PB.2701.2	chr12	-	3918	1	novel_in_catalog	DDIT3	novel	940	4	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	142	429	3275	3703	20.0	-1	True	ATTAAA	-14
PB.2701.1	chr12	-	1166	3	full-splice_match	DDIT3	ENST00000552740.5	951	3	0	-215	0	-1	multi-exon	FALSE	canonical	1	635371	junction_1	12722.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	192	579	373	951	20.0	-1	True	ATTAAA	-14
PB.2701.4	chr12	-	2273	1	novel_in_catalog	DDIT3	novel	940	4	NA	NA	3	-1289	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	non_coding	NA	NA	NA	NA	60.0	-4	True	NA	NA
PB.479.11	chr1	+	2187	13	novel_in_catalog	ACADM	novel	2535	11	NA	NA	13	5	combination_of_known_junctions	FALSE	canonical	1	4609	junction_11	344009.9152542599	NA	0	NA	TRUE	NA	NA	NA	C	coding	342	1029	67	1095	15.0	-33	True	AATAAA	-21
PB.484.21	chr1	-	2871	22	full-splice_match	USP33	ENST00000370792.7	2917	22	43	3	2	-3	multi-exon	FALSE	canonical	1	57	junction_21	133152.44103985006	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	305	2791	40.0	1	True	AATAAA	-12
PB.484.20	chr1	-	4129	20	novel_in_catalog	USP33	novel	4327	24	NA	NA	0	-3	intron_retention	FALSE	canonical	1	57	junction_19	126564.46188595753	NA	7	NA	TRUE	NA	NA	NA	C	coding	516	1551	307	1857	40.0	-1	True	AATAAA	-12
PB.484.23	chr1	-	2434	19	novel_in_catalog	USP33	novel	4327	24	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	14829	junction_2	122990.42651496634	NA	0	NA	TRUE	NA	NA	NA	C	coding	698	2097	258	2354	40.0	21	False	AATAAA	-12
PB.484.22	chr1	-	2777	21	novel_in_catalog	USP33	novel	4327	24	NA	NA	-42	-3	combination_of_known_junctions	FALSE	canonical	1	102471	junction_8	99908.61265990784	NA	1	1	TRUE	NA	NA	NA	C	coding	797	2394	304	2697	40.0	-25	False	AATAAA	-12
PB.484.25	chr1	-	2822	22	incomplete-splice_match	USP33	ENST00000370793.5	4502	25	-14	15794	-14	0	3prime_fragment	FALSE	canonical	1	57	junction_21	124539.3626679047	NA	0	NA	TRUE	NA	NA	NA	C	coding	820	2460	362	2821	75.0	3	True	NA	NA
PB.484.24	chr1	-	2625	21	incomplete-splice_match	USP33	ENST00000370794.7	4327	24	4	15798	-2	0	3prime_fragment	FALSE	canonical	1	161412	junction_20	85974.24059418902	NA	0	NA	TRUE	NA	NA	NA	C	coding	789	2367	258	2624	75.0	21	False	NA	NA
PB.6831.3	chr2	-	2381	11	novel_in_catalog	METTL8	novel	8132	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	7369	junction_10	45435.19964179755	NA	1	1	TRUE	NA	NA	NA	C	coding	455	1368	93	1460	100.0	-2	True	NA	NA
PB.484.26	chr1	-	2774	22	full-splice_match	USP33	ENST00000370792.7	2917	22	10	133	4	0	multi-exon	FALSE	canonical	1	57	junction_21	133152.44103985006	NA	1	1	TRUE	NA	NA	NA	C	coding	812	2436	338	2773	75.0	27	False	NA	NA
PB.484.29	chr1	-	2464	20	incomplete-splice_match	USP33	ENST00000370793.5	4502	25	41	18773	0	2776	3prime_fragment	FALSE	canonical	1	57	junction_19	130545.86835966275	NA	0	NA	TRUE	NA	NA	NA	C	coding	719	2157	307	2463	60.0	-1	True	NA	NA
PB.484.28	chr1	-	2472	20	novel_in_catalog	USP33	novel	4327	24	NA	NA	-2	0	no_combination_of_known_junctions	FALSE	canonical	1	57	junction_19	140996.6261958596	NA	2	2	TRUE	NA	NA	NA	C	coding	721	2163	309	2471	75.0	-3	True	NA	NA
PB.8885.17	chr4	+	4984	24	novel_not_in_catalog	SMARCAD1	novel	5017	24	NA	NA	5	-1	any annotated donor/acceptor	FALSE	canonical	1	1696	junction_1	82356.86213423478	NA	0	NA	TRUE	NA	NA	NA	C	coding	1028	3087	143	3229	25.0	6	True	AATAAA	-15
PB.139.1	chr1	+	2400	3	novel_not_in_catalog	HTR6	novel	1984	3	NA	NA	-447	1403	any annotated donor/acceptor	FALSE	canonical	1	317	junction_1	3133.5	NA	8	NA	TRUE	NA	NA	NA	A	coding	165	498	306	803	10.0	-2	True	AATAAA	-15
PB.11759.7	chr9	-	3995	8	novel_not_in_catalog	TRAF1	novel	3715	6	NA	NA	2603	-1	any annotated donor/acceptor	FALSE	canonical	1	1949	junction_6	137551.00074517814	NA	0	NA	TRUE	NA	NA	NA	C	coding	294	885	485	1369	40.0	-4	True	NA	NA
PB.9453.5	chr5	-	3501	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	53	1095	-16	-1095	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	229	1158	60.0	-19	True	NA	NA
PB.9530.3	chr5	-	5132	33	full-splice_match	ARAP3	ENST00000239440.8	5250	33	-35	153	-35	-146	multi-exon	FALSE	canonical	1	21273	junction_32	37783.66307905938	NA	1	NA	TRUE	NA	NA	NA	C	coding	1544	4635	102	4736	25.0	-27	False	NA	NA
PB.7297.7	chr20	-	3273	20	incomplete-splice_match	CHD6	ENST00000373233.7	10818	37	100	52450	-10	-17289	3prime_fragment	FALSE	canonical	1	80559	junction_19	38273.339030129515	NA	0	NA	TRUE	NA	NA	NA	C	coding	1063	3189	85	3273	25.0	-22	True	AATAAA	-16
PB.6541.2	chr2	-	3197	5	full-splice_match	TEX261	ENST00000433258.5	758	5	-25	-2414	16	-2	multi-exon	FALSE	canonical	1	63192	junction_3	250620.25814766053	NA	0	NA	TRUE	NA	NA	NA	C	coding	42	129	409	537	35.0	-4	True	NA	NA
PB.8885.10	chr4	+	4505	24	full-splice_match	SMARCAD1	ENST00000354268.8	4912	24	-186	593	-5	-122	multi-exon	FALSE	canonical	1	87000	junction_1	69926.82129922131	NA	1	1	TRUE	NA	NA	NA	C	coding	1026	3081	260	3340	15.0	-4	True	ATTAAA	-17
PB.6504.1	chr2	+	3485	5	full-splice_match	LGALSL	ENST00000238875.9	3926	5	437	4	8	-4	multi-exon	FALSE	canonical	1	165183	junction_1	34587.76107599334	NA	3	NA	TRUE	NA	NA	NA	C	coding	172	519	18	536	40.0	8	True	AATAAA	-13
PB.6504.2	chr2	+	3344	5	full-splice_match	LGALSL	ENST00000238875.9	3926	5	360	222	5	-222	multi-exon	FALSE	canonical	1	165183	junction_1	34587.76107599334	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	95	613	70.0	-29	True	NA	NA
PB.9071.4	chr4	+	4300	10	novel_in_catalog	CEP44	novel	4534	12	NA	NA	-11	-1	intron_retention	TRUE	canonical	1	4549	junction_1	50629.72936921548	NA	2	NA	TRUE	NA	NA	NA	C	coding	363	1092	220	1311	15.0	-30	True	AATAAA	-16
PB.9071.5	chr4	+	4272	11	novel_in_catalog	CEP44	novel	4534	12	NA	NA	-7	-4	intron_retention	FALSE	canonical	1	11460	junction_10	44727.72979215466	NA	3	NA	TRUE	NA	NA	NA	C	coding	363	1092	195	1286	15.0	-26	True	AATAAA	-13
PB.9071.6	chr4	+	4420	12	incomplete-splice_match	CEP44	ENST00000396791.7	3824	14	4	11963	4	0	intron_retention	FALSE	canonical	1	29482	junction_1	35609.40763291271	NA	2	NA	TRUE	NA	NA	NA	C	coding	390	1173	301	1473	20.0	-14	True	AATAAA	-17
PB.9071.7	chr4	+	4400	11	novel_in_catalog	CEP44	novel	4534	12	NA	NA	4	-2	intron_retention	FALSE	canonical	1	3285	junction_1	42178.32617885636	NA	4	NA	TRUE	NA	NA	NA	C	coding	390	1173	283	1455	15.0	-14	True	AATAAA	-15
PB.9337.39	chr5	-	3439	10	novel_in_catalog	MEF2C	novel	7561	11	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	4186	junction_9	207328.6668510224	NA	0	NA	TRUE	NA	NA	NA	C	coding	463	1392	275	1666	35.0	0	True	AATAAA	-29
PB.3027.9	chr12	-	4351	13	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	-18	-3	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	218564.21526107035	NA	2	1	TRUE	NA	NA	NA	C	coding	575	1728	34	1761	20.0	0	True	AGTAAA	-13
PB.3027.8	chr12	-	5252	12	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	199099	junction_11	173150.2899028891	NA	3	NA	TRUE	NA	NA	NA	C	coding	568	1707	34	1740	20.0	0	True	AGTAAA	-14
PB.1747.1	chr11	-	2013	12	full-splice_match	DEAF1	ENST00000382409.3	2500	12	487	0	-114	0	multi-exon	FALSE	canonical	1	189740	junction_11	109276.94022441293	NA	5	NA	TRUE	NA	NA	NA	A	coding	497	1494	203	1696	10.0	-1	True	AATAAA	-15
PB.3027.5	chr12	-	3785	14	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	-19	-1	any annotated donor/acceptor	FALSE	canonical	1	19627	junction_1	206653.5754447396	NA	1	NA	TRUE	NA	NA	NA	C	coding	938	2817	35	2851	20.0	-1	True	AGTAAA	-15
PB.3027.4	chr12	-	4499	14	novel_in_catalog	ANKLE2	novel	4646	13	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	1	32930	junction_3	231592.2136429875	NA	0	NA	TRUE	NA	NA	NA	C	coding	648	1947	34	1980	20.0	0	True	AGTAAA	-15
PB.3027.3	chr12	-	4437	13	full-splice_match	ANKLE2	ENST00000357997.9	4646	13	43	166	-32	-1	multi-exon	FALSE	canonical	1	199099	junction_12	166418.7533713899	NA	2	NA	TRUE	NA	NA	NA	C	coding	938	2817	48	2864	20.0	0	True	AGTAAA	-15
PB.3027.2	chr12	-	4563	14	novel_not_in_catalog	ANKLE2	novel	4646	13	NA	NA	-28	1	any annotated donor/acceptor	FALSE	canonical	1	4411	junction_13	229035.7502554501	NA	1	NA	TRUE	NA	NA	NA	C	coding	874	2625	364	2988	15.0	4	True	AGTAAA	-17
PB.3027.1	chr12	-	4593	13	full-splice_match	ANKLE2	ENST00000357997.9	4646	13	50	3	-25	-3	multi-exon	FALSE	canonical	1	199099	junction_12	166418.7533713899	NA	6	1	TRUE	NA	NA	NA	C	coding	938	2817	41	2857	35.0	-7	True	AATGAA	-14
PB.9725.1	chr6	-	2113	4	full-splice_match	EEF1E1	ENST00000379715.9	1077	4	17	-1053	-2	152	multi-exon	FALSE	canonical	1	453606	junction_1	159134.4607891913	NA	0	NA	TRUE	NA	NA	NA	C	coding	174	525	41	565	15.0	-23	True	NA	NA
PB.240.34	chr1	-	4351	18	novel_not_in_catalog	PUM1	novel	4631	18	NA	NA	1	-2491	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	157195.76417825252	NA	2	1	TRUE	NA	NA	NA	C	coding	962	2889	94	2982	100.0	19	True	NA	NA
PB.3161.16	chr13	-	1970	1	full-splice_match	AL157813.1	ENST00000612996.1	587	1	-453	-930	-453	930	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	non_coding	NA	NA	NA	NA	70.0	-1	True	NA	NA
PB.11243.16	chr8	+	5502	19	novel_not_in_catalog	DPY19L4	novel	680	4	NA	NA	26	15	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_18	51701.34378250402	NA	20	1	TRUE	NA	NA	NA	C	coding	681	2046	74	2119	35.0	-22	False	AATAAA	-34
PB.10994.11	chr8	+	1664	11	incomplete-splice_match	VPS37A	ENST00000324849.8	4906	12	383	11418	16	-5	3prime_fragment	FALSE	canonical	1	88813	junction_3	74165.82456826055	NA	0	NA	TRUE	NA	NA	NA	C	coding	397	1194	292	1485	30.0	-4	True	TATAAA	-13
PB.8885.11	chr4	+	3730	3	incomplete-splice_match	SMARCAD1	ENST00000510105.5	2409	17	-4	47759	-4	-44300	3prime_fragment	FALSE	canonical	1	87000	junction_1	43693.0	NA	4	NA	TRUE	NA	NA	NA	C	coding	123	372	259	630	30.0	-3	True	NA	NA
PB.12387.3	chrY	+	4369	5	novel_not_in_catalog	NLGN4Y	novel	7368	7	NA	NA	0	9136	any annotated donor/acceptor	FALSE	canonical	1	5203	junction_4	10678.442220192981	NA	0	NA	TRUE	NA	NA	NA	B	coding	220	663	349	1011	10.0	0	True	NA	NA
PB.12387.2	chrY	+	5447	6	novel_in_catalog	NLGN4Y	novel	7368	7	NA	NA	-3	238	combination_of_known_junctions	FALSE	canonical	1	8570	junction_1	10338.43016323078	NA	0	NA	TRUE	NA	NA	NA	B	coding	797	2394	352	2745	35.0	-3	True	AATAAA	-30
PB.4966.30	chr17	-	3218	24	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	33	11460	33	-3593	3prime_fragment	FALSE	canonical	1	528600	junction_20	196816.51782099833	NA	0	NA	TRUE	NA	NA	NA	C	coding	1030	3090	127	3216	45.0	5	True	NA	NA
PB.4966.31	chr17	-	1919	15	incomplete-splice_match	TOP2A	ENST00000423485.5	5758	35	55	18096	55	6868	3prime_fragment	FALSE	canonical	1	528600	junction_11	106593.47684745335	NA	0	NA	TRUE	NA	NA	NA	C	coding	605	1815	105	1919	65.0	-15	True	NA	NA
PB.6816.1	chr2	-	4837	29	full-splice_match	TTC21B	ENST00000243344.7	5482	29	3	642	3	-642	multi-exon	FALSE	canonical	1	81817	junction_28	23304.99307636758	NA	0	NA	TRUE	NA	NA	NA	C	coding	1316	3951	136	4086	60.0	-65	True	AATAAA	-20
PB.12387.4	chrY	+	4140	6	novel_in_catalog	NLGN4Y	novel	7368	7	NA	NA	15	-972	combination_of_known_junctions	FALSE	canonical	1	8570	junction_1	10338.43016323078	NA	0	NA	TRUE	NA	NA	NA	B	coding	797	2394	334	2727	65.0	15	True	NA	NA
PB.7668.15	chr22	-	3928	14	full-splice_match	HPS4	ENST00000439453.5	3936	14	0	8	0	-8	multi-exon	FALSE	canonical	1	14531	junction_8	98071.73780688063	NA	2	NA	TRUE	NA	NA	NA	C	coding	443	1332	1455	2786	35.0	15	False	AATAAA	-28
PB.9726.15	chr6	-	2066	1	novel_in_catalog	SLC35B3	novel	2200	12	NA	NA	-6	-20384	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	113	342	135	476	25.0	-10	True	AATAAA	-19
PB.7668.17	chr22	-	3308	13	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	-529	-8	any annotated donor/acceptor	FALSE	canonical	1	172	junction_12	95758.7561218294	NA	3	NA	TRUE	NA	NA	NA	C	coding	699	2100	67	2166	35.0	3641	False	AATAAA	-28
PB.9726.13	chr6	-	3006	4	novel_not_in_catalog	SLC35B3	novel	2442	12	NA	NA	-2	-12424	any annotated donor/acceptor	FALSE	canonical	1	16387	junction_3	84379.35090214114	NA	2	NA	TRUE	NA	NA	NA	C	coding	152	459	169	627	20.0	-30	True	AATAAA	-44
PB.9726.12	chr6	-	3492	4	incomplete-splice_match	SLC35B3	ENST00000644923.1	1973	11	97	11985	23	-11985	3prime_fragment	FALSE	canonical	1	152871	junction_3	20933.819866957445	NA	1	NA	TRUE	NA	NA	NA	C	coding	152	459	216	674	55.0	2	True	AATAAA	-18
PB.7668.12	chr22	-	3848	15	novel_not_in_catalog	HPS4	novel	471	4	NA	NA	0	-7	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_14	106631.46868566157	NA	2	1	TRUE	NA	NA	NA	C	coding	443	1332	1374	2705	35.0	23	False	AATAAA	-29
PB.9726.10	chr6	-	2969	5	novel_not_in_catalog	SLC35B3	novel	2442	12	NA	NA	-4	-11920	any annotated donor/acceptor	FALSE	canonical	1	6389	junction_1	77671.74705612073	NA	0	NA	TRUE	NA	NA	NA	C	coding	144	435	243	677	30.0	-8	True	AATAAA	-16
PB.240.30	chr1	-	3482	19	novel_in_catalog	PUM1	novel	4631	18	NA	NA	2	-13	combination_of_known_junctions	FALSE	canonical	1	34118	junction_8	190190.4706714032	NA	0	NA	TRUE	NA	NA	NA	C	coding	1014	3045	90	3134	70.0	23	True	NA	NA
PB.7668.18	chr22	-	4532	13	novel_in_catalog	HPS4	novel	471	4	NA	NA	2	-17	intron_retention	FALSE	canonical	1	54662	junction_5	79779.51277962387	NA	1	NA	TRUE	NA	NA	NA	C	coding	443	1332	2068	3399	35.0	-11	True	AATAAA	-19
PB.7668.19	chr22	-	4429	14	novel_in_catalog	HPS4	novel	471	4	NA	NA	-1	-17	combination_of_known_junctions	FALSE	canonical	1	5657	junction_1	94565.40594372645	NA	2	NA	TRUE	NA	NA	NA	C	coding	680	2043	602	2644	35.0	-14	True	AATAAA	-19
PB.5564.11	chr19	+	2323	2	incomplete-splice_match	CIRBP	ENST00000413636.6	1606	6	-1	2	0	-2	intron_retention	FALSE	canonical	1	3507802	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	coding	256	771	826	1596	25.0	-1	True	ATTAAA	-16
PB.5564.10	chr19	+	2759	8	novel_in_catalog	CIRBP	novel	1509	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	652580	junction_7	1502775.9782915083	NA	0	NA	TRUE	NA	NA	NA	C	coding	172	519	87	605	25.0	-1	True	AATAAA	-18
PB.10999.24	chr8	+	6579	40	novel_in_catalog	PCM1	novel	6820	39	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	1	115325	junction_7	228531.2567181986	NA	2	NA	TRUE	NA	NA	NA	C	coding	2063	6192	295	6486	30.0	-8	True	AATAAA	-23
PB.8885.12	chr4	+	3911	11	novel_not_in_catalog	SMARCAD1	novel	5017	24	NA	NA	-3	-5466	any annotated donor/acceptor	FALSE	canonical	1	13715	junction_10	71016.35369856721	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	258	1847	35.0	-2	True	AATAAA	-15
PB.3727.5	chr15	+	2683	9	novel_not_in_catalog	AC242376.2	novel	883	6	NA	NA	-5883	-6	any annotated donor/acceptor	FALSE	canonical	0	0	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	B	coding	85	258	127	384	15.0	NA	False	AATAAA	-12
PB.3441.2	chr14	-	3333	16	novel_in_catalog	FERMT2	novel	3369	15	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	1	23566	junction_12	213669.47489474382	NA	0	NA	TRUE	NA	NA	NA	C	coding	691	2076	156	2231	25.0	-17	True	AATAAA	-17
PB.3441.1	chr14	-	3436	15	full-splice_match	FERMT2	ENST00000341590.7	3338	15	-103	5	-103	-1	multi-exon	FALSE	canonical	1	356451	junction_14	107103.0620865306	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	290	2332	15.0	-1	True	AATAAA	-19
PB.3441.4	chr14	-	2265	15	full-splice_match	FERMT2	ENST00000341590.7	3338	15	60	1013	-2	96	multi-exon	FALSE	canonical	1	356451	junction_14	107103.0620865306	NA	0	NA	TRUE	NA	NA	NA	C	coding	680	2043	127	2169	40.0	12	True	AATAAA	-16
PB.3146.12	chr13	+	2132	2	novel_not_in_catalog	COG3	novel	4498	23	NA	NA	16957	-6	any annotated donor/acceptor	FALSE	canonical	1	3033	junction_1	0.0	NA	0	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	10.0	NA	False	AATAAA	-36
PB.8706.6	chr4	+	1996	8	full-splice_match	CD38	ENST00000226279.7	5668	8	50	3622	16	353	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	88	990	15.0	0	True	AATATA	-24
PB.8885.13	chr4	+	4627	24	full-splice_match	SMARCAD1	ENST00000457823.6	4649	24	19	3	-2	-3	multi-exon	FALSE	canonical	1	87000	junction_1	72993.74402175708	NA	2	1	TRUE	NA	NA	NA	C	coding	1028	3087	257	3343	30.0	-1	True	AATAAA	-15
PB.8706.7	chr4	+	1471	8	full-splice_match	CD38	ENST00000226279.7	5668	8	51	4146	17	-171	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	87	989	30.0	1	True	CATAAA	-18
PB.9453.1	chr5	-	4930	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	66	-347	-3	347	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	216	1145	45.0	-6	True	NA	NA
PB.11618.2	chr9	-	2112	16	novel_not_in_catalog	RASEF	novel	5576	17	NA	NA	36575	-2825	any annotated donor/acceptor	FALSE	canonical	1	506	junction_15	20923.352122980254	NA	1	NA	TRUE	NA	NA	NA	B	coding	534	1605	241	1845	85.0	NA	False	TTTAAA	-5
PB.12112.1	chrX	-	4114	1	full-splice_match	SPIN4	ENST00000374884.2	4117	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	A	coding	241	726	549	1274	25.0	3	True	AATAAA	-18
PB.8706.5	chr4	+	1245	8	full-splice_match	CD38	ENST00000226279.7	5668	8	50	4373	16	-398	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	88	990	25.0	0	True	AATGAA	-22
PB.8706.2	chr4	+	1872	8	full-splice_match	CD38	ENST00000226279.7	5668	8	38	3758	4	217	multi-exon	FALSE	canonical	1	156446	junction_7	38795.35279133419	NA	0	NA	TRUE	NA	NA	NA	C	coding	300	903	100	1002	30.0	-5801	False	ATTAAA	-14
PB.8706.3	chr4	+	3149	2	full-splice_match	CD38	ENST00000506191.1	594	2	20	-2575	6	2575	multi-exon	FALSE	canonical	1	157891	junction_1	0.0	NA	2	NA	TRUE	NA	NA	NA	C	coding	141	426	98	523	70.0	-5799	False	NA	NA
PB.11101.14	chr8	+	2767	12	incomplete-splice_match	ADAM9	ENST00000487273.6	3839	22	29690	-1	9640	1	5prime_fragment	FALSE	canonical	1	904267	junction_4	163015.4614403541	NA	1	NA	TRUE	NA	NA	NA	C	coding	465	1398	68	1465	10.0	-6054	False	NA	NA
PB.11101.10	chr8	+	2759	22	full-splice_match	ADAM9	ENST00000487273.6	3839	22	-16	1096	-16	276	multi-exon	FALSE	canonical	1	478626	junction_1	220440.27360426018	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	95	2554	30.0	-3	True	AGTAAA	-15
PB.11101.11	chr8	+	3705	21	full-splice_match	ADAM9	ENST00000481873.7	3793	21	-53	141	-13	-5	multi-exon	FALSE	canonical	1	5012	junction_18	304934.5370279332	NA	1	NA	TRUE	NA	NA	NA	C	coding	712	2139	92	2230	5.0	0	True	NA	NA
PB.11101.12	chr8	+	3045	22	full-splice_match	ADAM9	ENST00000487273.6	3839	22	-9	803	-9	569	multi-exon	FALSE	canonical	1	478626	junction_1	220440.27360426018	NA	0	NA	TRUE	NA	NA	NA	C	coding	819	2460	88	2547	20.0	4	True	NA	NA
PB.9453.2	chr5	-	4623	7	full-splice_match	PPP2CA	ENST00000481195.5	4649	7	29	-3	29	3	multi-exon	FALSE	canonical	1	1837069	junction_4	85051.48238697679	NA	0	NA	TRUE	NA	NA	NA	C	coding	309	930	253	1182	25.0	551	False	ATTAAA	-17
PB.11311.3	chr8	+	2333	6	novel_not_in_catalog	NOV	novel	2522	5	NA	NA	-4	2	any annotated donor/acceptor	TRUE	non_canonical	0	0	junction_5	71505.40641098405	NA	1	1	TRUE	NA	NA	NA	C	coding	340	1023	88	1110	15.0	0	True	AATAAA	-17
PB.11311.2	chr8	+	3554	4	novel_in_catalog	NOV	novel	2522	5	NA	NA	56	0	intron_retention	FALSE	canonical	1	148346	junction_1	23152.902659397925	NA	14	NA	TRUE	NA	NA	NA	C	coding	285	858	1476	2333	15.0	-9	True	AATAAA	-15
PB.11311.1	chr8	+	2288	5	full-splice_match	NOV	ENST00000259526.3	2522	5	237	-3	93	3	multi-exon	FALSE	canonical	1	148346	junction_1	23036.38127370486	NA	1	NA	TRUE	NA	NA	NA	C	coding	136	411	654	1064	15.0	-9725	False	AATAAA	-18
PB.8063.3	chr3	-	2663	7	full-splice_match	ZDHHC3	ENST00000424952.6	2687	7	26	-2	15	2	multi-exon	FALSE	canonical	1	285486	junction_6	159390.8823382177	NA	0	NA	TRUE	NA	NA	NA	C	coding	298	897	247	1143	10.0	-2	True	AATAAA	-17
PB.6486.3	chr2	-	3826	18	full-splice_match	PUS10	ENST00000316752.10	2278	18	1	-1549	1	-198	multi-exon	FALSE	canonical	1	16194	junction_17	10377.56345385343	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	262	1851	35.0	0	True	CATAAA	-9
PB.5864.2	chr19	-	3528	21	full-splice_match	GMIP	ENST00000203556.8	3538	21	11	-1	11	1	multi-exon	TRUE	canonical	1	112327	junction_11	90137.52779163349	NA	1	NA	TRUE	NA	NA	NA	C	coding	970	2913	128	3040	5.0	-17	True	AATAAA	-14
PB.7396.2	chr20	+	2769	7	full-splice_match	MTG2	ENST00000370823.7	2929	7	-19	179	-3	-179	multi-exon	FALSE	canonical	1	17152	junction_1	83469.24226856793	NA	1	NA	TRUE	NA	NA	NA	C	coding	406	1221	38	1258	70.0	-13	True	NA	NA
PB.7396.3	chr20	+	3498	8	novel_in_catalog	MTG2	novel	667	2	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	17152	junction_1	80563.85345925356	NA	3	NA	TRUE	NA	NA	NA	C	coding	406	1221	29	1249	20.0	-4	True	NA	NA
PB.7396.4	chr20	+	3741	7	full-splice_match	MTG2	ENST00000370823.7	2929	7	-12	-800	4	-1	multi-exon	FALSE	canonical	1	17152	junction_1	83469.24226856793	NA	2	NA	TRUE	NA	NA	NA	C	coding	406	1221	31	1251	15.0	-6	True	NA	NA
PB.7396.5	chr20	+	3525	6	novel_in_catalog	MTG2	novel	667	2	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	4782	junction_1	96117.85114743255	NA	1	NA	TRUE	NA	NA	NA	C	coding	178	537	500	1036	20.0	0	True	NA	NA
PB.7396.6	chr20	+	3283	7	novel_in_catalog	MTG2	novel	667	2	NA	NA	-2	-3	no_combination_of_known_junctions	FALSE	canonical	1	4782	junction_1	90529.58867992031	NA	8	NA	TRUE	NA	NA	NA	C	coding	178	537	499	1035	15.0	1	True	NA	NA
PB.6486.4	chr2	-	2107	18	full-splice_match	PUS10	ENST00000407787.5	1820	18	-28	-259	-28	3	multi-exon	FALSE	canonical	1	11918	junction_17	10999.713287864593	NA	0	NA	TRUE	NA	NA	NA	C	coding	529	1590	89	1678	35.0	1	True	AATAAA	-16
PB.11243.12	chr8	+	4117	18	novel_in_catalog	DPY19L4	novel	680	4	NA	NA	-11	-1992	no_combination_of_known_junctions	FALSE	canonical	1	4467	junction_9	46630.57465019719	NA	0	NA	TRUE	NA	NA	NA	C	coding	690	2073	111	2183	40.0	-11	True	AATAAA	-21
PB.9888.1	chr6	+	3337	15	novel_in_catalog	AL645922.1	novel	3874	30	NA	NA	18260	32	intron_retention	TRUE	canonical	1	614823	junction_1	332839.22041804175	NA	0	NA	TRUE	NA	NA	NA	A	coding	471	1416	1259	2674	25.0	-5954	False	ATTAAA	-12
PB.1833.2	chr11	+	3809	1	genic	PDE3B	novel	NA	NA	NA	NA	-10	-53405	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	1	NA	NA	NA	NA	NA	C	coding	328	987	364	1350	25.0	-6358	False	AATAAA	-18
PB.1833.3	chr11	+	4108	16	full-splice_match	PDE3B	ENST00000282096.8	6076	16	5	1963	5	187	multi-exon	FALSE	canonical	1	80177	junction_1	29190.89717215892	NA	0	NA	TRUE	NA	NA	NA	C	coding	1112	3339	349	3687	10.0	5	True	AATAGA	-17
PB.6705.1	chr2	-	4805	16	full-splice_match	SLC35F5	ENST00000245680.6	4412	16	181	-574	-22	574	multi-exon	TRUE	canonical	1	216280	junction_7	58636.056904945435	NA	3	NA	TRUE	NA	NA	NA	C	coding	523	1572	234	1805	25.0	-1	True	AATAAA	-20
PB.1833.1	chr11	+	4829	16	full-splice_match	PDE3B	ENST00000282096.8	6076	16	100	1147	-8	1003	multi-exon	FALSE	canonical	1	80177	junction_1	29190.89717215892	NA	1	NA	TRUE	NA	NA	NA	C	coding	1112	3339	254	3592	50.0	-6248	False	ATTAAA	-25
PB.1833.6	chr11	+	8134	16	full-splice_match	PDE3B	ENST00000282096.8	6076	16	42	-2100	42	2100	multi-exon	FALSE	canonical	1	80177	junction_1	29190.89717215892	NA	1	NA	TRUE	NA	NA	NA	C	coding	751	2256	1395	3650	5.0	4	True	NA	NA
PB.1833.7	chr11	+	6028	16	full-splice_match	PDE3B	ENST00000282096.8	6076	16	47	1	47	-1	multi-exon	FALSE	canonical	1	80177	junction_1	29190.89717215892	NA	0	NA	TRUE	NA	NA	NA	C	coding	1112	3339	307	3645	30.0	9	True	CATAAA	-17
PB.1833.4	chr11	+	4653	16	full-splice_match	PDE3B	ENST00000282096.8	6076	16	27	1396	27	754	multi-exon	FALSE	canonical	1	80177	junction_1	29190.89717215892	NA	1	NA	TRUE	NA	NA	NA	C	coding	1112	3339	327	3665	20.0	-11	True	AATAAA	-31
PB.1833.5	chr11	+	5209	16	full-splice_match	PDE3B	ENST00000282096.8	6076	16	191	676	83	-676	multi-exon	FALSE	canonical	1	80177	junction_1	29190.89717215892	NA	2	NA	TRUE	NA	NA	NA	C	coding	1112	3339	163	3501	40.0	-6157	False	AATAAA	-18
PB.9738.6	chr6	-	4853	9	novel_in_catalog	NEDD9	novel	4536	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	1506	junction_6	156220.72499491705	NA	0	NA	TRUE	NA	NA	NA	C	coding	828	2487	506	2992	15.0	-5	True	ATTAAA	-20
PB.1833.8	chr11	+	3426	15	incomplete-splice_match	PDE3B	ENST00000282096.8	6076	16	66	4286	-42	-2136	3prime_fragment	FALSE	canonical	1	80177	junction_1	25033.09703376793	NA	3	NA	TRUE	NA	NA	NA	C	coding	1046	3138	288	3425	45.0	-15	True	AAGAAA	-22
PB.1833.9	chr11	+	3453	7	incomplete-splice_match	PDE3B	ENST00000282096.8	6076	16	68	51474	-40	1364	3prime_fragment	FALSE	canonical	1	80177	junction_1	29175.159363555995	NA	2	NA	TRUE	NA	NA	NA	C	coding	611	1836	286	2121	15.0	-13	True	NA	NA
PB.647.1	chr1	+	5653	2	full-splice_match	TENT5C	ENST00000369448.3	5751	2	114	-16	114	16	multi-exon	FALSE	canonical	1	143321	junction_1	0.0	NA	7	NA	TRUE	NA	NA	NA	A	coding	391	1176	134	1309	20.0	-4	True	AATAAA	-41
PB.11305.1	chr8	-	3973	8	full-splice_match	EIF3H	ENST00000521861.5	3959	8	-17	3	-9	-3	multi-exon	FALSE	canonical	1	3027879	junction_7	752935.7658539821	NA	1	NA	TRUE	NA	NA	NA	C	coding	352	1059	42	1100	50.0	-16	False	AATAAA	-13
PB.11218.9	chr8	+	4131	25	full-splice_match	WWP1	ENST00000517970.5	4686	25	-1	556	-1	471	multi-exon	FALSE	canonical	1	48261	junction_24	72587.2607153964	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	309	3077	25.0	-1	True	ATTAAA	-11
PB.11218.8	chr8	+	4286	25	full-splice_match	WWP1	ENST00000517970.5	4686	25	29	371	-7	-371	multi-exon	FALSE	canonical	1	48261	junction_24	72587.2607153964	NA	4	NA	TRUE	NA	NA	NA	C	coding	922	2769	279	3047	25.0	29	True	AATACA	-15
PB.9738.4	chr6	-	4939	9	novel_not_in_catalog	NEDD9	novel	4536	7	NA	NA	4	-1	any annotated donor/acceptor	FALSE	canonical	1	737	junction_8	159356.0787187278	NA	0	NA	TRUE	NA	NA	NA	C	coding	834	2505	572	3076	10.0	-39	True	ATTAAA	-22
PB.303.10	chr1	-	2225	16	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	-16	104	intron_retention	FALSE	canonical	1	226807	junction_2	183481.19481794917	NA	0	NA	TRUE	NA	NA	NA	C	coding	382	1149	850	1998	30.0	10	True	AATAAA	-16
PB.3093.6	chr13	-	3338	19	novel_in_catalog	HSPH1	novel	4987	16	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	1	75679	junction_1	416478.6247544204	NA	0	NA	TRUE	NA	NA	NA	C	coding	851	2556	322	2877	25.0	-1	True	AATAAA	-24
PB.303.12	chr1	-	1619	15	novel_in_catalog	SF3A3	novel	3673	17	NA	NA	-15	104	combination_of_known_junctions	FALSE	canonical	1	26090	junction_13	217201.31054472702	NA	1	NA	TRUE	NA	NA	NA	C	coding	448	1347	46	1392	30.0	11	True	AATAAA	-16
PB.8706.9	chr4	+	5455	7	full-splice_match	CD38	ENST00000502843.5	1560	7	54	-3949	17	-26	multi-exon	FALSE	canonical	1	8431	junction_2	83761.66753238355	NA	0	NA	TRUE	NA	NA	NA	C	coding	122	369	87	455	70.0	1	True	AATGAA	-3
PB.11218.7	chr8	+	4151	24	novel_in_catalog	WWP1	novel	4686	25	NA	NA	-85	479	no_combination_of_known_junctions	FALSE	canonical	1	9788	junction_15	77612.13725561064	NA	2	NA	TRUE	NA	NA	NA	C	coding	898	2697	393	3089	5.0	2	True	ATTAAA	-19
PB.11218.6	chr8	+	3389	25	full-splice_match	WWP1	ENST00000517970.5	4686	25	-87	1384	-87	-357	multi-exon	FALSE	canonical	1	48261	junction_24	72587.2607153964	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	395	3163	40.0	0	True	AAAAAG	-17
PB.11218.5	chr8	+	4624	25	full-splice_match	WWP1	ENST00000517970.5	4686	25	-87	149	-87	-149	multi-exon	FALSE	canonical	1	48261	junction_24	72587.2607153964	NA	0	NA	TRUE	NA	NA	NA	C	coding	922	2769	395	3163	25.0	0	True	AGTAAA	-15
PB.3093.7	chr13	-	3209	18	full-splice_match	HSPH1	ENST00000630972.2	3570	18	358	3	9	0	multi-exon	FALSE	canonical	1	26632	junction_17	424118.58533517	NA	0	NA	TRUE	NA	NA	NA	C	coding	755	2268	252	2519	25.0	659	False	AATAAA	-24
PB.1854.3	chr11	-	3608	13	novel_not_in_catalog	E2F8	novel	3432	13	NA	NA	25	-5	any annotated donor/acceptor	FALSE	canonical	1	5326	junction_2	27064.48885173255	NA	1	NA	TRUE	NA	NA	NA	C	coding	744	2235	489	2723	40.0	-7	True	ATTAAA	-9
PB.1854.2	chr11	-	3466	13	full-splice_match	E2F8	ENST00000527884.5	3432	13	-42	8	-42	-5	multi-exon	FALSE	canonical	1	12335	junction_12	24723.236210962663	NA	1	NA	TRUE	NA	NA	NA	C	coding	867	2604	276	2879	40.0	-8	True	ATTAAA	-9
PB.1854.1	chr11	-	3371	13	full-splice_match	E2F8	ENST00000250024.8	3240	13	333	-464	333	-5	multi-exon	FALSE	canonical	1	29431	junction_12	21716.679983847283	NA	2	NA	TRUE	NA	NA	NA	C	coding	867	2604	181	2784	40.0	1036	False	ATTAAA	-9
PB.6802.7	chr2	-	6769	34	novel_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-58	-31511	no_combination_of_known_junctions	FALSE	canonical	1	5526	junction_1	41068.594532133815	NA	1	NA	TRUE	NA	NA	NA	B	coding	1666	5001	87	5087	35.0	-13	False	AATAAA	-23
PB.6802.6	chr2	-	7021	36	novel_not_in_catalog	LY75-CD302	novel	5650	39	NA	NA	-17974	-31511	any annotated donor/acceptor	FALSE	canonical	1	469	junction_34	48085.9076938645	NA	1	NA	TRUE	NA	NA	NA	B	coding	1626	4881	459	5339	35.0	0	True	AATAAA	-23
PB.1854.4	chr11	-	3810	12	novel_in_catalog	E2F8	novel	3432	13	NA	NA	9	-6	intron_retention	FALSE	canonical	1	29431	junction_11	21578.92568845281	NA	2	NA	TRUE	NA	NA	NA	C	coding	679	2040	505	2544	40.0	2	True	ATTAAA	-8
PB.6580.9	chr2	-	1776	6	novel_not_in_catalog	EVA1A	novel	589	4	NA	NA	1	-27	any annotated donor/acceptor	FALSE	canonical	1	9110	junction_5	38076.825338255294	NA	0	NA	TRUE	NA	NA	NA	C	coding	152	459	427	885	70.0	0	True	ATTAAA	-22
PB.8954.11	chr4	-	5400	22	novel_in_catalog	SEC24D	novel	4030	23	NA	NA	4	-1	intron_retention	FALSE	canonical	1	188245	junction_21	93943.5243811028	NA	1	1	TRUE	NA	NA	NA	C	coding	763	2292	236	2527	30.0	-13	True	AATAAA	-18
PB.7710.1	chr22	+	3295	21	full-splice_match	SMTN	ENST00000333137.11	3295	21	-1	1	0	0	multi-exon	FALSE	canonical	1	191439	junction_1	134270.2563456535	NA	0	NA	TRUE	NA	NA	NA	A	coding	915	2748	220	2967	10.0	0	True	GATAAA	-17
PB.8792.21	chr4	+	1817	8	novel_not_in_catalog	PAICS	novel	3340	10	NA	NA	-2006	-2	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_7	506874.6802753565	NA	0	NA	TRUE	NA	NA	NA	C	coding	333	1002	65	1066	15.0	NA	False	ATTAAA	-16
PB.6833.6	chr2	+	2133	16	full-splice_match	DYNC1I2	ENST00000409197.5	2572	16	58	381	-14	19	multi-exon	FALSE	canonical	1	295	junction_4	73533.61094610636	NA	0	NA	TRUE	NA	NA	NA	C	coding	612	1839	154	1992	30.0	-25	True	ATTAAA	-28
PB.9506.3	chr5	+	2827	1	full-splice_match	PCDHB2	ENST00000194155.6	4126	1	45	1254	1	185	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	798	2397	169	2565	25.0	0	True	AGTAAA	-19
PB.9506.2	chr5	+	4113	1	full-splice_match	PCDHB2	ENST00000194155.6	4126	1	28	-15	0	15	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	798	2397	186	2582	35.0	-17	True	AATAAA	-36
PB.9506.1	chr5	+	4424	1	full-splice_match	PCDHB2	ENST00000194155.6	4126	1	14	-312	14	312	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	2	NA	NA	NA	NA	NA	C	coding	798	2397	200	2596	20.0	-5913	False	ATTAAA	-24
PB.8792.23	chr4	+	2413	4	incomplete-splice_match	PAICS	ENST00000399688.7	3297	10	14479	3	1918	-3	5prime_fragment	FALSE	canonical	1	261279	junction_1	624985.9284767938	NA	2	NA	TRUE	NA	NA	NA	C	coding	182	549	45	593	15.0	-9833	False	ATTAAA	-15
PB.7906.5	chr3	+	4566	19	novel_not_in_catalog	ITPR1	novel	9767	59	NA	NA	-18492	0	any annotated donor/acceptor	FALSE	canonical	1	1600	junction_1	90411.41934157447	NA	2	NA	TRUE	NA	NA	NA	C	coding	916	2751	646	3396	75.0	-8166	False	NA	NA
PB.7906.7	chr3	+	2687	2	novel_not_in_catalog	ITPR1	novel	9767	59	NA	NA	-18430	17928	any annotated donor/acceptor	FALSE	canonical	1	107	junction_1	0.0	NA	4	NA	FALSE	NA	NA	NA	C	coding	115	348	611	958	30.0	-8104	False	ATTAAA	-14
PB.9506.4	chr5	+	3572	2	full-splice_match	PCDHB2	ENST00000622947.1	2231	2	31	-1372	10	-67	multi-exon	FALSE	canonical	1	2692	junction_1	0.0	NA	3	NA	TRUE	NA	NA	NA	C	coding	459	1380	744	2123	55.0	14	True	NA	NA
PB.7906.8	chr3	+	2120	9	novel_not_in_catalog	ITPR1	novel	9767	59	NA	NA	-18396	-4	any annotated donor/acceptor	FALSE	canonical	1	1600	junction_1	93565.045313992	NA	0	NA	TRUE	NA	NA	NA	C	coding	449	1350	550	1899	75.0	-8070	False	NA	NA
PB.1400.12	chr10	+	3442	14	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-3	290	combination_of_known_junctions	FALSE	canonical	1	29580	junction_2	108282.50297353223	NA	8	1	TRUE	NA	NA	NA	B	coding	427	1284	458	1741	35.0	-3	True	ATTAAA	-19
PB.5801.11	chr19	-	3598	22	novel_in_catalog	EPS15L1	novel	3082	23	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	7579	junction_1	100398.21590396125	NA	0	NA	TRUE	NA	NA	NA	C	coding	750	2253	68	2320	35.0	-1	True	AATAAA	-16
PB.5801.10	chr19	-	2632	22	novel_in_catalog	EPS15L1	novel	681	2	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	16478	junction_18	108461.70565123668	NA	0	NA	TRUE	NA	NA	NA	C	coding	657	1974	292	2265	70.0	1	True	AAGAAA	-12
PB.5801.13	chr19	-	3482	16	incomplete-splice_match	EPS15L1	ENST00000592031.5	2788	23	-2	39055	-2	-3	3prime_fragment	FALSE	canonical	1	16478	junction_12	114832.92972894723	NA	0	NA	TRUE	NA	NA	NA	C	coding	504	1515	296	1810	10.0	-3	True	AATACA	-12
PB.5801.12	chr19	-	3509	16	full-splice_match	EPS15L1	ENST00000597937.5	3486	16	-23	0	2	0	multi-exon	FALSE	canonical	1	159470	junction_15	92712.76416450014	NA	0	NA	TRUE	NA	NA	NA	C	coding	601	1806	29	1834	5.0	-4	True	AATACA	-15
PB.6711.4	chr2	+	2192	6	full-splice_match	STEAP3	ENST00000393110.6	4262	6	-5	2075	-5	-121	multi-exon	FALSE	canonical	1	23185	junction_1	99778.00237326862	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	457	1953	35.0	-10	True	NA	NA
PB.6711.5	chr2	+	3841	5	full-splice_match	STEAP3	ENST00000393107.2	1871	5	-19	-1951	3	-3	multi-exon	FALSE	canonical	1	70533	junction_1	75071.32304140842	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	64	1530	25.0	-2	True	AATAAA	-16
PB.6711.6	chr2	+	1766	5	full-splice_match	STEAP3	ENST00000393107.2	1871	5	-19	124	3	-124	multi-exon	FALSE	canonical	1	70533	junction_1	75071.32304140842	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	64	1530	25.0	-2	True	NA	NA
PB.9579.2	chr5	+	2789	12	full-splice_match	G3BP1	ENST00000356245.7	2803	12	16	-2	5	2	multi-exon	FALSE	canonical	1	555803	junction_7	258423.40072370245	NA	4	NA	TRUE	NA	NA	NA	C	coding	466	1401	128	1528	45.0	5	True	ATTAAA	-21
PB.6711.1	chr2	+	4199	6	full-splice_match	STEAP3	ENST00000393110.6	4262	6	-17	80	-17	-80	multi-exon	FALSE	canonical	1	23185	junction_1	99778.00237326862	NA	0	NA	TRUE	NA	NA	NA	C	coding	498	1497	469	1965	25.0	-6955	False	NA	NA
PB.6711.2	chr2	+	3938	6	full-splice_match	STEAP3	ENST00000393106.6	3915	6	-26	3	-26	-3	multi-exon	FALSE	canonical	1	2192	junction_1	109747.08697473478	NA	1	NA	TRUE	NA	NA	NA	C	coding	488	1467	161	1627	25.0	-6964	False	AATAAA	-16
PB.6711.3	chr2	+	4228	7	novel_not_in_catalog	STEAP3	novel	4262	6	NA	NA	-22	-4	any annotated donor/acceptor	FALSE	canonical	1	1472	junction_2	112363.98481040187	NA	3	1	TRUE	NA	NA	NA	C	coding	488	1467	452	1918	25.0	-6960	False	AATAAA	-15
PB.5816.1	chr19	-	2028	5	full-splice_match	ABHD8	ENST00000247706.3	2090	5	61	1	13	-1	multi-exon	FALSE	canonical	1	128476	junction_4	53491.64594296477	NA	0	NA	TRUE	NA	NA	NA	A	coding	439	1320	180	1499	10.0	-14	True	AATAAA	-17
PB.479.13	chr1	+	3368	11	incomplete-splice_match	ACADM	ENST00000370841.8	2619	12	382	190	-22	-2	intron_retention	FALSE	canonical	1	750250	junction_1	118109.77085021374	NA	2	NA	TRUE	NA	NA	NA	C	coding	414	1245	56	1300	25.0	-22	True	AATAAA	-14
PB.2519.30	chr12	+	2854	2	incomplete-splice_match	STK38L	ENST00000543992.1	982	4	4559	-2404	4559	-872	5prime_fragment	FALSE	canonical	1	365359	junction_1	0.0	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	35.0	NA	False	ATTAAA	-13
PB.585.1	chr1	+	3847	15	full-splice_match	GPSM2	ENST00000264126.8	3029	15	0	-818	0	818	multi-exon	FALSE	canonical	1	78176	junction_1	59551.26906429759	NA	0	NA	TRUE	NA	NA	NA	C	coding	684	2055	493	2547	70.0	0	True	CATAAA	-27
PB.1419.2	chr10	-	3617	6	full-splice_match	SLC16A9	ENST00000395348.7	4178	6	320	241	-237	-237	multi-exon	FALSE	canonical	1	35416	junction_5	15959.7486772192	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	318	1847	85.0	-25	True	AATAAA	-12
PB.1419.3	chr10	-	2282	6	full-splice_match	SLC16A9	ENST00000395348.7	4178	6	330	1566	-227	-1562	multi-exon	FALSE	canonical	1	35416	junction_5	15959.7486772192	NA	1	NA	TRUE	NA	NA	NA	C	coding	509	1530	308	1837	25.0	-15	True	AATAAA	-14
PB.1419.1	chr10	-	3705	5	novel_in_catalog	SLC16A9	novel	4178	6	NA	NA	-232	0	no_combination_of_known_junctions	FALSE	canonical	1	1222	junction_3	32103.134706754106	NA	27	2	TRUE	NA	NA	NA	C	coding	461	1386	313	1698	10.0	-20	True	AATAAA	-20
PB.1822.8	chr11	+	4503	28	novel_not_in_catalog	USP47	novel	7775	27	NA	NA	-13	-16	any annotated donor/acceptor	FALSE	canonical	1	10312	junction_27	104128.83137465485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1297	3894	225	4118	90.0	-13	True	NA	NA
PB.1822.9	chr11	+	4494	28	full-splice_match	USP47	ENST00000527733.5	4525	28	15	16	15	-16	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	197	4264	90.0	15	True	NA	NA
PB.5907.1	chr19	-	3503	15	full-splice_match	RHPN2	ENST00000254260.7	3500	15	0	-3	0	3	multi-exon	FALSE	canonical	1	97840	junction_14	32487.01851006752	NA	0	NA	TRUE	NA	NA	NA	C	coding	686	2061	37	2097	20.0	-1	True	AATAAA	-20
PB.1822.4	chr11	+	2963	19	incomplete-splice_match	USP47	ENST00000339865.9	7775	27	535	16363	-17	-189	3prime_fragment	FALSE	canonical	1	48142	junction_1	82003.36225830419	NA	0	NA	TRUE	NA	NA	NA	C	coding	911	2733	229	2961	55.0	-17	True	NA	NA
PB.1822.5	chr11	+	4677	28	novel_not_in_catalog	USP47	novel	7775	27	NA	NA	-15	156	any annotated donor/acceptor	FALSE	canonical	1	10312	junction_27	104128.83137465485	NA	0	NA	TRUE	NA	NA	NA	C	coding	1297	3894	227	4120	20.0	-15	True	AATAAA	-24
PB.1822.6	chr11	+	4295	28	full-splice_match	USP47	ENST00000527733.5	4525	28	-15	245	-15	-245	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	227	4294	20.0	-15	True	AATAAA	-20
PB.1822.7	chr11	+	5543	28	full-splice_match	USP47	ENST00000527733.5	4525	28	11	-1029	11	505	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	201	4268	35.0	11	True	AATAAA	-12
PB.9391.5	chr5	+	3245	3	full-splice_match	SRP19	ENST00000515755.1	631	3	-27	-2587	4	-218	multi-exon	FALSE	canonical	1	52271	junction_2	190668.5	NA	1	NA	TRUE	NA	NA	NA	C	non_coding	NA	NA	NA	NA	65.0	-6	True	AAAACA	-39
PB.1822.1	chr11	+	4511	27	full-splice_match	USP47	ENST00000339865.9	7775	27	517	2747	0	155	multi-exon	TRUE	canonical	1	48142	junction_1	112554.38039683213	NA	0	NA	TRUE	NA	NA	NA	C	coding	1287	3864	247	4110	25.0	-5354	False	AATAAA	-23
PB.1822.2	chr11	+	7288	28	full-splice_match	USP47	ENST00000527733.5	4525	28	-31	-2732	4	-1	multi-exon	FALSE	canonical	1	170913	junction_1	99506.1966710047	NA	0	NA	TRUE	NA	NA	NA	C	coding	1355	4068	243	4310	15.0	-5350	False	AATAAA	-18
PB.1822.3	chr11	+	5126	29	novel_not_in_catalog	USP47	novel	7775	27	NA	NA	13	-2	any annotated donor/acceptor	FALSE	canonical	1	9652	junction_18	145502.74624785737	NA	2	NA	TRUE	NA	NA	NA	C	coding	1374	4125	234	4358	30.0	-5341	False	AATAAA	-23
PB.11510.1	chr9	-	6327	13	novel_not_in_catalog	KIF24	novel	6131	12	NA	NA	-17930	0	any annotated donor/acceptor	FALSE	canonical	1	22395	junction_12	8861.037486284173	NA	0	NA	TRUE	NA	NA	NA	B	coding	1368	4107	222	4328	25.0	-75	False	AATACA	-20
PB.11510.2	chr9	-	6171	13	novel_not_in_catalog	KIF24	novel	6131	12	NA	NA	-17923	-149	any annotated donor/acceptor	FALSE	canonical	1	22395	junction_12	8861.037486284173	NA	0	NA	TRUE	NA	NA	NA	B	coding	1368	4107	215	4321	35.0	-68	False	AATAAA	-15
PB.11510.3	chr9	-	5928	11	novel_not_in_catalog	KIF24	novel	6131	12	NA	NA	-17908	-149	any annotated donor/acceptor	FALSE	canonical	1	1605	junction_5	13311.664434247132	NA	7	NA	TRUE	NA	NA	NA	B	coding	1292	3879	200	4078	35.0	-53	True	AATAAA	-15
PB.11275.39	chr8	-	2805	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	1	167	intron_retention	FALSE	non_canonical	0	0	junction_6	808730.995599639	NA	5	1	TRUE	NA	NA	NA	C	coding	245	738	270	1007	35.0	4231	False	GGGGCT	-26
PB.11275.34	chr8	-	2869	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	-44	-42	intron_retention	FALSE	canonical	1	74	junction_6	794837.8126438577	NA	5	NA	TRUE	NA	NA	NA	C	coding	245	738	167	904	25.0	-20	True	NA	NA
PB.11275.35	chr8	-	2637	6	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	0	-42	intron_retention	FALSE	canonical	1	6068	junction_5	819014.6512366186	NA	1	NA	TRUE	NA	NA	NA	C	coding	168	507	166	672	25.0	0	True	NA	NA
PB.6036.2	chr19	-	2555	16	novel_in_catalog	PHLDB3	novel	1526	10	NA	NA	-108	-11	combination_of_known_junctions	FALSE	canonical	1	5002	junction_15	38577.37186601608	NA	1	NA	TRUE	NA	NA	NA	A	coding	635	1908	352	2259	40.0	3213	False	ATTAAA	-9
PB.11275.32	chr8	-	2859	7	novel_not_in_catalog	YWHAZ	novel	5248	7	NA	NA	50	-41	intron_retention	FALSE	non_canonical	0	0	junction_6	802859.460424789	NA	6	1	TRUE	NA	NA	NA	C	coding	245	738	156	893	25.0	4703	False	NA	NA
PB.11275.33	chr8	-	3027	7	novel_in_catalog	YWHAZ	novel	5248	7	NA	NA	15	-42	intron_retention	FALSE	canonical	1	9976	junction_2	766036.8663810617	NA	1	NA	TRUE	NA	NA	NA	C	coding	245	738	325	1062	25.0	5	True	NA	NA
PB.6497.24	chr2	+	5092	25	full-splice_match	EHBP1	ENST00000263991.9	5165	25	70	3	70	-3	multi-exon	FALSE	canonical	1	21839	junction_7	104200.13358775793	NA	2	NA	TRUE	NA	NA	NA	C	coding	1231	3696	413	4108	25.0	47	False	AATAAA	-21
PB.7974.2	chr3	+	1601	4	novel_not_in_catalog	UBE2E2	novel	1248	6	NA	NA	-2	-44017	any annotated donor/acceptor	FALSE	canonical	1	2329	junction_3	199896.82103191802	NA	1	NA	TRUE	NA	NA	NA	B	coding	76	231	174	404	85.0	-4	True	AATACA	-45
PB.7974.1	chr3	+	3470	4	novel_in_catalog	UBE2E2	novel	1248	6	NA	NA	15	2798	combination_of_known_junctions	FALSE	canonical	1	6569	junction_3	198369.79151966548	NA	0	NA	TRUE	NA	NA	NA	B	coding	149	450	1652	2101	35.0	7	True	NA	NA
PB.9530.1	chr5	-	5260	33	full-splice_match	ARAP3	ENST00000239440.8	5250	33	-9	-1	-9	1	multi-exon	FALSE	canonical	1	21273	junction_32	37783.66307905938	NA	0	NA	TRUE	NA	NA	NA	C	coding	1544	4635	76	4710	25.0	-1	True	AATAAA	-19
PB.9530.2	chr5	-	5230	32	novel_in_catalog	ARAP3	novel	4927	32	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	21273	junction_31	37689.4389866444	NA	0	NA	TRUE	NA	NA	NA	C	coding	1531	4596	93	4688	40.0	-18	False	AATAAA	-11
PB.2832.1	chr12	+	4279	28	novel_in_catalog	ANO4	novel	1385	11	NA	NA	-283	-5	no_combination_of_known_junctions	FALSE	canonical	1	6252	junction_1	8464.732972533528	NA	1	1	TRUE	NA	NA	NA	A	coding	1071	3216	284	3499	15.0	-18	True	AATAAA	-35
PB.11758.2	chr9	-	3399	10	novel_not_in_catalog	PHF19	novel	3525	10	NA	NA	-7	0	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_4	97379.21337054775	NA	1	1	TRUE	NA	NA	NA	C	coding	214	645	509	1153	30.0	9606	False	NA	NA
PB.11758.3	chr9	-	4013	14	novel_in_catalog	PHF19	novel	3525	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	27076	junction_3	214417.80548177732	NA	1	NA	TRUE	NA	NA	NA	C	coding	403	1212	114	1325	30.0	-1	True	NA	NA
PB.11758.1	chr9	-	4134	15	full-splice_match	PHF19	ENST00000373896.7	4241	15	108	-1	-32	0	multi-exon	FALSE	canonical	1	136811	junction_9	194117.87474925737	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	146	1888	30.0	-3	True	NA	NA
PB.11758.6	chr9	-	4101	15	novel_not_in_catalog	PHF19	novel	3525	10	NA	NA	45	-4	any annotated donor/acceptor	FALSE	canonical	1	288	junction_14	210339.21784978226	NA	0	NA	TRUE	NA	NA	NA	C	coding	580	1743	118	1860	30.0	2069	False	AAAAAG	-43
PB.11758.4	chr9	-	3348	9	full-splice_match	PHF19	ENST00000487555.5	1092	9	-25	-2231	-5	0	multi-exon	FALSE	canonical	1	11757	junction_8	90112.91246533082	NA	1	NA	TRUE	NA	NA	NA	C	coding	194	585	76	660	30.0	9588	False	NA	NA
PB.11758.5	chr9	-	3434	10	full-splice_match	PHF19	ENST00000419155.5	3525	10	42	49	-5	-2	multi-exon	FALSE	canonical	1	11757	junction_9	74576.05011887752	NA	0	NA	TRUE	NA	NA	NA	C	coding	371	1116	76	1191	30.0	9588	False	AAAAAG	-45
PB.3093.21	chr13	-	2672	17	incomplete-splice_match	HSPH1	ENST00000320027.9	5191	18	23	3378	23	112	3prime_fragment	FALSE	canonical	1	711764	junction_16	297123.51993047434	NA	0	NA	TRUE	NA	NA	NA	C	coding	783	2349	323	2671	70.0	-2	True	AAAAAG	-35
PB.3093.20	chr13	-	2348	18	full-splice_match	HSPH1	ENST00000630972.2	3570	18	366	856	17	-508	multi-exon	FALSE	canonical	1	26632	junction_17	424118.58533517	NA	0	NA	TRUE	NA	NA	NA	C	coding	701	2103	244	2346	55.0	667	False	NA	NA
PB.3093.23	chr13	-	1837	14	incomplete-splice_match	HSPH1	ENST00000320027.9	5191	18	378	5245	378	-1755	3prime_fragment	FALSE	canonical	1	711764	junction_13	222861.9404329471	NA	0	NA	TRUE	NA	NA	NA	C	coding	520	1560	277	1836	65.0	1140	False	NA	NA
PB.3093.22	chr13	-	2673	17	incomplete-splice_match	HSPH1	ENST00000320027.9	5191	18	-87	3487	25	3	3prime_fragment	FALSE	canonical	1	711764	junction_16	297123.51993047434	NA	0	NA	TRUE	NA	NA	NA	C	coding	747	2241	433	2673	50.0	-2	True	AATACA	-21
PB.3093.25	chr13	-	3396	13	novel_in_catalog	HSPH1	novel	4987	16	NA	NA	40	-1755	intron_retention	FALSE	canonical	1	711764	junction_12	226088.38372046745	NA	3	NA	TRUE	NA	NA	NA	C	coding	421	1263	2133	3395	65.0	13	True	NA	NA
PB.3093.24	chr13	-	2170	13	incomplete-splice_match	HSPH1	ENST00000380405.7	3480	17	-82	3661	30	-1750	3prime_fragment	FALSE	canonical	1	50949	junction_2	334707.3854619032	NA	0	NA	TRUE	NA	NA	NA	C	coding	581	1743	428	2170	65.0	3	True	NA	NA
PB.3093.27	chr13	-	2190	13	incomplete-splice_match	HSPH1	ENST00000320027.9	5191	18	-84	6166	28	-2676	3prime_fragment	FALSE	canonical	1	711764	junction_12	178902.08465961364	NA	0	NA	TRUE	NA	NA	NA	C	coding	587	1761	430	2190	45.0	1	True	AAAAAG	-30
PB.3093.26	chr13	-	2214	14	novel_not_in_catalog	HSPH1	novel	4987	16	NA	NA	19	-1755	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_13	346307.19893058523	NA	1	NA	TRUE	NA	NA	NA	C	coding	629	1887	327	2213	65.0	-6	True	NA	NA
PB.3093.29	chr13	-	1628	12	incomplete-splice_match	HSPH1	ENST00000630972.2	3570	18	359	7196	10	-5282	3prime_fragment	FALSE	canonical	1	26632	junction_11	307666.5279230606	NA	0	NA	TRUE	NA	NA	NA	C	coding	459	1377	251	1627	60.0	660	False	NA	NA
PB.3093.28	chr13	-	2009	12	incomplete-splice_match	HSPH1	ENST00000320027.9	5191	18	23	8772	23	-5282	3prime_fragment	FALSE	canonical	1	711764	junction_11	159550.25410734705	NA	0	NA	TRUE	NA	NA	NA	C	coding	562	1686	323	2008	60.0	-2	True	NA	NA
PB.5864.1	chr19	-	3446	20	full-splice_match	GMIP	ENST00000587238.5	2987	20	-89	-370	17	3	multi-exon	FALSE	canonical	1	47998	junction_7	99811.80272738166	NA	0	NA	TRUE	NA	NA	NA	C	coding	944	2835	122	2956	10.0	-11	True	AATAAA	-16
PB.5864.6	chr19	-	1730	12	novel_not_in_catalog	GMIP	novel	3538	21	NA	NA	1	-1	any annotated donor/acceptor	FALSE	non_canonical	0	0	junction_1	128343.95044528131	NA	2	1	TRUE	NA	NA	NA	C	coding	420	1263	138	1400	10.0	-27	True	AATAAA	-12
PB.5864.4	chr19	-	3583	20	novel_in_catalog	GMIP	novel	3538	21	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	39430	junction_9	100596.10559662714	NA	0	NA	TRUE	NA	NA	NA	C	coding	838	2517	581	3097	10.0	0	True	AATAAA	-12
PB.9738.5	chr6	-	4785	9	novel_in_catalog	NEDD9	novel	4536	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	2503	junction_6	154815.34214892107	NA	2	NA	TRUE	NA	NA	NA	C	coding	828	2487	437	2923	10.0	-5	True	ATTAAA	-21
PB.1400.18	chr10	+	2259	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	0	-133	no_combination_of_known_junctions	FALSE	canonical	1	14282	junction_1	122524.75929061123	NA	0	NA	TRUE	NA	NA	NA	B	coding	427	1284	261	1544	75.0	0	True	NA	NA
PB.1400.19	chr10	+	5391	12	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-4	-411	combination_of_known_junctions	FALSE	canonical	1	37505	junction_1	81234.5514978562	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	186	1340	30.0	6	True	AATAAA	-17
PB.8687.2	chr4	+	1497	1	full-splice_match	BLOC1S4	ENST00000320776.4	1617	1	108	12	108	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	217	654	48	701	35.0	-26	True	AATAGA	-34
PB.11929.10	chr9	-	2399	10	novel_not_in_catalog	DPH7	novel	1311	2	NA	NA	11	0	intron_retention	FALSE	canonical	1	12186	junction_5	113757.81447248165	NA	2	NA	TRUE	NA	NA	NA	C	coding	276	831	1239	2069	55.0	-25	True	ATTAAA	-13
PB.8687.1	chr4	+	1217	1	full-splice_match	BLOC1S4	ENST00000320776.4	1617	1	91	309	91	-309	mono-exon	FALSE	NA	NA	NA	NA	NA	NA	0	NA	NA	NA	NA	NA	C	coding	217	654	65	718	35.0	-43	True	ATTAAA	-19
PB.2949.1	chr12	+	536	3	full-splice_match	COX6A1	ENST00000229379.2	572	3	23	13	23	-8	multi-exon	FALSE	canonical	1	1392	junction_2	1036693.5	NA	0	NA	TRUE	NA	NA	NA	A	coding	109	330	15	344	30.0	-5	True	AATAAA	-13
PB.1400.13	chr10	+	5811	12	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	37505	junction_1	81234.5514978562	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	195	1349	35.0	-3	True	AATAAA	-28
PB.1400.10	chr10	+	2400	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-11	-133	combination_of_known_junctions	FALSE	canonical	1	45368	junction_1	90174.47523963229	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	397	1551	75.0	-11	True	NA	NA
PB.1400.11	chr10	+	3388	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-10	293	combination_of_known_junctions	FALSE	canonical	1	45368	junction_1	90174.47523963229	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	396	1550	25.0	-10	True	ATTAAA	-22
PB.1400.16	chr10	+	6060	14	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	29580	junction_2	108282.50297353223	NA	0	NA	TRUE	NA	NA	NA	B	coding	427	1284	455	1738	40.0	0	True	AATAAA	-22
PB.1400.17	chr10	+	3150	14	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	29580	junction_2	102286.42637551941	NA	0	NA	TRUE	NA	NA	NA	B	coding	384	1155	455	1609	35.0	0	True	AGTAAA	-26
PB.1400.14	chr10	+	2337	12	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	1	37505	junction_1	81234.5514978562	NA	1	1	TRUE	NA	NA	NA	B	coding	384	1155	195	1349	20.0	-3	True	AATAAA	-23
PB.1400.15	chr10	+	2525	13	novel_in_catalog	MAPK8	novel	5844	12	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	1	45368	junction_1	99003.28859110775	NA	0	NA	TRUE	NA	NA	NA	B	coding	427	1284	388	1671	20.0	-2	True	AATAAA	-23
PB.356.4	chr1	+	2197	11	full-splice_match	ST3GAL3	ENST00000361400.9	2212	11	8	7	0	3	multi-exon	FALSE	canonical	1	20655	junction_2	53204.71938615971	NA	1	NA	TRUE	NA	NA	NA	C	coding	359	1080	184	1263	5.0	5	True	AATAAA	-9
PB.5945.7	chr19	+	2486	4	full-splice_match	ZNF146	ENST00000443387.2	3326	4	-27	867	0	-864	multi-exon	FALSE	canonical	1	290973	junction_1	181112.22459446397	NA	1	NA	TRUE	NA	NA	NA	C	coding	292	879	1020	1898	70.0	0	True	AATAGA	-35
PB.727.13	chr1	-	2448	3	full-splice_match	MCL1	ENST00000369026.2	3932	3	-20	1504	-20	867	multi-exon	FALSE	canonical	1	2423665	junction_1	240748.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	411	1133	20.0	-1	True	AATAAA	-28
PB.727.10	chr1	-	2136	3	full-splice_match	MCL1	ENST00000369026.2	3932	3	377	1419	317	952	multi-exon	FALSE	canonical	1	2423665	junction_1	240748.5	NA	1	NA	TRUE	NA	NA	NA	C	coding	240	723	14	736	20.0	642	False	AATAAA	-13